Prediction of potential genes in microbial genomes Time: Wed May 18 14:31:20 2011 Seq name: gi|316920349|gb|ADCU01000001.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.1, whole genome shotgun sequence Length of sequence - 971906 bp Number of predicted genes - 889, with homology - 831 Number of transcription units - 494, operones - 189 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 225 - 352 100.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. + TRNA 439 - 515 90.5 # Asp GTC 0 0 1 1 Tu 1 . + CDS 811 - 1575 481 ## COG3021 Uncharacterized protein conserved in bacteria + Term 1599 - 1640 2.1 - Term 1589 - 1629 4.9 2 2 Op 1 8/0.095 - CDS 1666 - 3069 755 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 3 2 Op 2 . - CDS 3140 - 3895 498 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 4002 - 4061 2.2 + Prom 3839 - 3898 5.1 4 3 Tu 1 . + CDS 3942 - 4664 551 ## COG0500 SAM-dependent methyltransferases + Term 4735 - 4773 -0.8 5 4 Tu 1 . - CDS 4684 - 5154 355 ## COG0328 Ribonuclease HI + Prom 4907 - 4966 2.7 6 5 Tu 1 . + CDS 5208 - 5942 669 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Term 6160 - 6207 9.6 + TRNA 6079 - 6155 90.5 # Asp GTC 0 0 + Prom 6081 - 6140 80.2 7 6 Op 1 . + CDS 6385 - 7299 499 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 + Prom 7339 - 7398 6.2 8 6 Op 2 . + CDS 7467 - 8924 1195 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 8951 - 8979 -1.0 9 6 Op 3 13/0.014 + CDS 8993 - 10159 1093 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Prom 10163 - 10222 2.3 10 7 Op 1 30/0.000 + CDS 10349 - 11374 1144 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 11 7 Op 2 36/0.000 + CDS 11376 - 12320 985 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 12 7 Op 3 5/0.265 + CDS 12310 - 13122 730 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II + Prom 13126 - 13185 2.5 13 7 Op 4 . + CDS 13273 - 14700 1457 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 14777 - 14817 10.6 + Prom 14797 - 14856 3.2 14 8 Tu 1 . + CDS 14929 - 15534 603 ## COG0778 Nitroreductase + Term 15565 - 15611 7.2 + Prom 15557 - 15616 6.9 15 9 Tu 1 . + CDS 15755 - 16291 660 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase + Term 16320 - 16351 2.4 - Term 16299 - 16348 6.3 16 10 Tu 1 . - CDS 16359 - 16664 112 ## - Prom 16828 - 16887 9.0 17 11 Tu 1 . + CDS 16677 - 16835 74 ## + Prom 16901 - 16960 10.2 18 12 Tu 1 . + CDS 17094 - 17450 370 ## ECA0688 hypothetical protein + Term 17563 - 17606 -1.0 - Term 17478 - 17521 3.5 19 13 Tu 1 . - CDS 17544 - 18194 624 ## COG0288 Carbonic anhydrase - Prom 18225 - 18284 2.7 20 14 Op 1 6/0.177 - CDS 18337 - 19749 861 ## COG4452 Inner membrane protein involved in colicin E2 resistance - Prom 19769 - 19828 3.1 21 14 Op 2 40/0.000 - CDS 19840 - 21276 995 ## COG0642 Signal transduction histidine kinase 22 14 Op 3 . - CDS 21273 - 21974 394 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 22002 - 22061 2.2 + Prom 22054 - 22113 4.9 23 15 Op 1 45/0.000 + CDS 22220 - 23167 932 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 24 15 Op 2 3/0.367 + CDS 23164 - 23934 674 ## COG0842 ABC-type multidrug transport system, permease component + Term 23940 - 23976 4.9 + Prom 24082 - 24141 8.1 25 16 Tu 1 . + CDS 24206 - 24652 400 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Term 25103 - 25154 6.3 26 17 Tu 1 . - CDS 25322 - 26656 730 ## COG5434 Endopolygalacturonase - Prom 26781 - 26840 5.3 + Prom 26749 - 26808 4.5 27 18 Tu 1 . + CDS 26974 - 27438 572 ## COG4807 Uncharacterized protein conserved in bacteria - Term 27441 - 27493 0.2 28 19 Tu 1 . - CDS 27504 - 29183 939 ## ECA3550 hypothetical protein 29 20 Op 1 1/0.524 + CDS 29785 - 30558 767 ## COG1349 Transcriptional regulators of sugar metabolism 30 20 Op 2 1/0.524 + CDS 30638 - 31954 1037 ## COG4573 Predicted tagatose 6-phosphate kinase 31 20 Op 3 1/0.524 + CDS 31951 - 33144 943 ## COG2222 Predicted phosphosugar isomerases 32 20 Op 4 13/0.014 + CDS 33162 - 33644 508 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 33 20 Op 5 13/0.014 + CDS 33657 - 34448 929 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 34 20 Op 6 4/0.313 + CDS 34438 - 35331 786 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 35 20 Op 7 . + CDS 35341 - 35784 346 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 36 20 Op 8 . + CDS 35797 - 36651 879 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 36763 - 36792 -0.3 + Prom 37519 - 37578 5.1 37 21 Op 1 . + CDS 37623 - 39533 1672 ## ESA_01921 hypothetical protein 38 21 Op 2 . + CDS 39530 - 40714 1035 ## COG2010 Cytochrome c, mono- and diheme variants - Term 40719 - 40759 6.4 39 22 Tu 1 . - CDS 40836 - 42731 939 ## XBJ1_0477 hypothetical protein; putative exported protein - Prom 42778 - 42837 6.1 + Prom 42865 - 42924 4.6 40 23 Tu 1 . + CDS 42989 - 43537 255 ## COG1434 Uncharacterized conserved protein + Term 43540 - 43587 2.2 41 24 Tu 1 . - CDS 43557 - 44816 855 ## COG1940 Transcriptional regulator/sugar kinase - Prom 44925 - 44984 3.2 + Prom 44713 - 44772 3.9 42 25 Op 1 . + CDS 44933 - 48202 2867 ## KP1_4125 putative transferase + Term 48212 - 48240 1.0 43 25 Op 2 2/0.408 + CDS 48283 - 49713 1234 ## COG0477 Permeases of the major facilitator superfamily 44 25 Op 3 . + CDS 49713 - 50561 372 ## COG2017 Galactose mutarotase and related enzymes - Term 50982 - 51037 6.5 45 26 Tu 1 . - CDS 51242 - 52432 1130 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Prom 52464 - 52523 4.4 46 27 Tu 1 . + CDS 52803 - 54056 1456 ## COG0112 Glycine/serine hydroxymethyltransferase + Term 54079 - 54109 2.1 47 28 Tu 1 . - CDS 54118 - 55128 613 ## COG3711 Transcriptional antiterminator - Prom 55254 - 55313 3.2 + Prom 55210 - 55269 3.1 48 29 Op 1 9/0.054 + CDS 55308 - 55973 359 ## COG3683 ABC-type uncharacterized transport system, periplasmic component 49 29 Op 2 . + CDS 55964 - 56974 601 ## COG2215 ABC-type uncharacterized transport system, permease component + Term 56998 - 57028 3.0 - Term 56979 - 57022 6.3 50 30 Tu 1 . - CDS 57040 - 57843 975 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family - Prom 57879 - 57938 6.2 + Prom 57991 - 58050 3.2 51 31 Tu 1 . + CDS 58076 - 58807 507 ## COG0565 rRNA methylase + Prom 58930 - 58989 3.6 52 32 Op 1 13/0.014 + CDS 59040 - 59537 521 ## COG1959 Predicted transcriptional regulator 53 32 Op 2 20/0.000 + CDS 59608 - 60822 1231 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 54 32 Op 3 14/0.014 + CDS 60853 - 61239 475 ## COG0822 NifU homolog involved in Fe-S cluster formation + Prom 61256 - 61315 1.6 55 33 Tu 1 . + CDS 61340 - 61663 382 ## COG0316 Uncharacterized conserved protein + Prom 61714 - 61773 3.1 56 34 Op 1 11/0.041 + CDS 61812 - 62330 486 ## COG1076 DnaJ-domain-containing proteins 1 57 34 Op 2 13/0.014 + CDS 62411 - 64261 1880 ## COG0443 Molecular chaperone 58 34 Op 3 9/0.054 + CDS 64264 - 64599 373 ## COG0633 Ferredoxin 59 34 Op 4 2/0.408 + CDS 64670 - 64870 304 ## COG2975 Uncharacterized protein conserved in bacteria + Term 64880 - 64911 2.5 + Prom 64988 - 65047 4.2 60 35 Op 1 . + CDS 65170 - 66468 1241 ## COG0260 Leucyl aminopeptidase 61 35 Op 2 . + CDS 66557 - 67393 701 ## Spro_3619 enhanced serine sensitivity protein SseB + Term 67409 - 67438 2.1 + Prom 67434 - 67493 3.8 62 36 Op 1 7/0.129 + CDS 67532 - 72520 4142 ## COG2373 Large extracellular alpha-helical protein 63 36 Op 2 1/0.524 + CDS 72531 - 74855 1109 ## COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC + Prom 75011 - 75070 4.8 64 37 Tu 1 . + CDS 75154 - 75585 540 ## COG0105 Nucleoside diphosphate kinase + Term 75665 - 75707 5.1 + Prom 75672 - 75731 4.1 65 38 Op 1 8/0.095 + CDS 75873 - 77132 992 ## COG0820 Predicted Fe-S-cluster redox enzyme + Prom 77138 - 77197 1.6 66 38 Op 2 6/0.177 + CDS 77220 - 77972 410 ## COG3063 Tfp pilus assembly protein PilF 67 38 Op 3 10/0.041 + CDS 77962 - 78966 536 ## COG1426 Uncharacterized protein conserved in bacteria + Prom 79064 - 79123 2.0 68 39 Tu 1 . + CDS 79173 - 80297 1126 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis + Term 80299 - 80331 2.3 + Prom 80322 - 80381 5.2 69 40 Op 1 12/0.020 + CDS 80415 - 81689 1386 ## COG0124 Histidyl-tRNA synthetase 70 40 Op 2 9/0.054 + CDS 81703 - 82323 741 ## COG2976 Uncharacterized protein conserved in bacteria 71 40 Op 3 7/0.129 + CDS 82335 - 83513 1088 ## COG1520 FOG: WD40-like repeat + Term 83593 - 83637 12.2 + Prom 83531 - 83590 4.2 72 41 Tu 1 1/0.524 + CDS 83704 - 85191 1858 ## COG1160 Predicted GTPases + Term 85218 - 85254 4.0 + Prom 85241 - 85300 4.4 73 42 Op 1 . + CDS 85351 - 86307 591 ## COG0679 Predicted permeases 74 42 Op 2 . + CDS 86317 - 86538 125 ## Spro_3603 hypothetical protein 75 43 Op 1 3/0.367 - CDS 86631 - 87827 806 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 76 43 Op 2 . - CDS 87842 - 89347 1139 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 77 44 Tu 1 . - CDS 89791 - 91167 831 ## COG1570 Exonuclease VII, large subunit - Prom 91202 - 91261 3.4 + Prom 91233 - 91292 5.3 78 45 Tu 1 13/0.014 + CDS 91338 - 92804 1724 ## COG0516 IMP dehydrogenase/GMP reductase + Term 92806 - 92874 6.1 + Prom 92816 - 92875 3.4 79 46 Tu 1 . + CDS 92907 - 94484 1598 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 94530 - 94563 5.4 + Prom 94578 - 94637 3.5 80 47 Tu 1 . + CDS 94796 - 96853 1366 ## Spro_0225 hypothetical protein + Term 96993 - 97025 5.6 81 48 Tu 1 . - CDS 97028 - 98311 1265 ## COG0001 Glutamate-1-semialdehyde aminotransferase - Prom 98347 - 98406 6.6 + Prom 98455 - 98514 5.6 82 49 Tu 1 . + CDS 98560 - 99996 1371 ## COG0038 Chloride channel protein EriC 83 50 Tu 1 . + CDS 100122 - 100466 369 ## COG0316 Uncharacterized conserved protein 84 51 Tu 1 . - CDS 100530 - 100958 296 ## COG2764 Uncharacterized protein conserved in bacteria - Prom 101129 - 101188 3.3 + Prom 101108 - 101167 4.0 85 52 Tu 1 . + CDS 101200 - 101424 124 ## Dd1591_2087 putative sugar-specific permease SgaT/UlaA + Term 101469 - 101498 1.8 - Term 101630 - 101666 8.2 86 53 Op 1 2/0.408 - CDS 101696 - 104350 1898 ## COG0383 Alpha-mannosidase 87 53 Op 2 . - CDS 104410 - 106323 1474 ## COG1299 Phosphotransferase system, fructose-specific IIC component - Prom 106403 - 106462 4.5 + Prom 106338 - 106397 4.7 88 54 Tu 1 . + CDS 106484 - 107254 569 ## COG2188 Transcriptional regulators - Term 107206 - 107245 5.5 89 55 Tu 1 . - CDS 107255 - 107869 793 ## COG2860 Predicted membrane protein - Prom 107944 - 108003 6.1 - Term 108022 - 108067 6.8 90 56 Op 1 5/0.265 - CDS 108085 - 108903 657 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 91 56 Op 2 . - CDS 108928 - 109629 791 ## COG0775 Nucleoside phosphorylase - Prom 109715 - 109774 3.5 + Prom 109694 - 109753 4.4 92 57 Op 1 . + CDS 109795 - 111306 1182 ## COG0232 dGTP triphosphohydrolase + Prom 111309 - 111368 2.9 93 57 Op 2 . + CDS 111561 - 112988 1394 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 113022 - 113077 14.4 + Prom 113059 - 113118 4.0 94 58 Op 1 . + CDS 113247 - 113531 379 ## Dd586_1919 putative DNA-damage-inducible protein J 95 58 Op 2 . + CDS 113528 - 113866 82 ## Dd586_1920 addiction module toxin, RelE/StbE family 96 59 Op 1 19/0.000 - CDS 114026 - 115504 1209 ## COG0477 Permeases of the major facilitator superfamily 97 59 Op 2 4/0.313 - CDS 115579 - 116754 1328 ## COG1566 Multidrug resistance efflux pump 98 59 Op 3 2/0.408 - CDS 116779 - 118236 460 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 99 59 Op 4 . - CDS 118271 - 118789 537 ## COG1846 Transcriptional regulators - Prom 118811 - 118870 6.2 - Term 118889 - 118930 -0.1 100 60 Op 1 . - CDS 118947 - 119321 165 ## Spro_3740 hypothetical protein 101 60 Op 2 . - CDS 119311 - 120072 442 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) - Prom 120149 - 120208 8.6 102 61 Op 1 . - CDS 120304 - 120798 387 ## ETAE_2763 hypothetical protein - Prom 120821 - 120880 4.5 103 61 Op 2 3/0.367 - CDS 120888 - 121862 611 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 104 61 Op 3 . - CDS 121960 - 122781 596 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 122820 - 122879 5.4 - Term 122850 - 122879 2.1 105 62 Tu 1 . - CDS 122903 - 123457 623 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) - Prom 123516 - 123575 3.0 106 63 Tu 1 . - CDS 123767 - 124846 655 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase - Prom 124937 - 124996 3.5 + Prom 125337 - 125396 1.8 107 64 Op 1 3/0.367 + CDS 125417 - 126781 975 ## COG1797 Cobyrinic acid a,c-diamide synthase 108 64 Op 2 2/0.408 + CDS 126778 - 127734 748 ## COG1270 Cobalamin biosynthesis protein CobD/CbiB 109 64 Op 3 5/0.265 + CDS 127760 - 128428 646 ## COG2082 Precorrin isomerase 110 64 Op 4 6/0.177 + CDS 128425 - 129588 1100 ## COG1903 Cobalamin biosynthesis protein CbiD 111 64 Op 5 2/0.408 + CDS 129585 - 130187 519 ## COG2241 Precorrin-6B methylase 1 112 64 Op 6 5/0.265 + CDS 130177 - 130746 475 ## COG2242 Precorrin-6B methylase 2 113 64 Op 7 12/0.020 + CDS 130739 - 131512 746 ## COG2875 Precorrin-4 methylase 114 64 Op 8 6/0.177 + CDS 131493 - 132602 783 ## COG2073 Cobalamin biosynthesis protein CbiG 115 64 Op 9 4/0.313 + CDS 132602 - 133342 826 ## COG1010 Precorrin-3B methylase + Term 133355 - 133398 3.1 116 65 Op 1 1/0.524 + CDS 133429 - 134256 698 ## COG2099 Precorrin-6x reductase 117 65 Op 2 2/0.408 + CDS 134272 - 135063 776 ## COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase 118 65 Op 3 . + CDS 135063 - 135803 642 ## COG2243 Precorrin-2 methylase 119 65 Op 4 4/0.313 + CDS 135800 - 136528 537 ## COG0310 ABC-type Co2+ transport system, permease component 120 65 Op 5 8/0.095 + CDS 136530 - 136811 375 ## COG1930 ABC-type cobalt transport system, periplasmic component 121 65 Op 6 34/0.000 + CDS 136798 - 137475 509 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 122 65 Op 7 2/0.408 + CDS 137475 - 138290 231 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 123 65 Op 8 4/0.313 + CDS 138300 - 139844 1372 ## COG1492 Cobyric acid synthase 124 65 Op 9 2/0.408 + CDS 139841 - 140389 418 ## COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 125 66 Tu 1 . + CDS 140498 - 141547 836 ## COG2038 NaMN:DMB phosphoribosyltransferase + Term 141569 - 141608 6.4 + Prom 142064 - 142123 9.0 126 67 Op 1 4/0.313 + CDS 142336 - 142881 504 ## COG3539 P pilus assembly protein, pilin FimA + Term 142978 - 143009 1.7 + Prom 142936 - 142995 2.7 127 67 Op 2 6/0.177 + CDS 143033 - 143560 415 ## COG3539 P pilus assembly protein, pilin FimA + Term 143682 - 143718 0.3 + Prom 143573 - 143632 4.5 128 68 Op 1 10/0.041 + CDS 143746 - 146301 2053 ## COG3188 P pilus assembly protein, porin PapC 129 68 Op 2 . + CDS 146306 - 147028 472 ## COG3121 P pilus assembly protein, chaperone PapD 130 68 Op 3 . + CDS 147040 - 147663 454 ## ETA_04010 adaptor/initiator (mannose-resistance fimbriae), MrfE protein 131 68 Op 4 . + CDS 147713 - 148243 327 ## COG3539 P pilus assembly protein, pilin FimA 132 68 Op 5 . + CDS 148290 - 150017 960 ## COG3307 Lipid A core - O-antigen ligase and related enzymes 133 68 Op 6 . + CDS 150017 - 150673 346 ## CKO_02620 hypothetical protein 134 68 Op 7 . + CDS 150696 - 151397 251 ## COG2771 DNA-binding HTH domain-containing proteins - Term 151954 - 151991 4.4 135 69 Op 1 . - CDS 152057 - 153058 581 ## YpsIP31758_4104 hypothetical protein 136 69 Op 2 . - CDS 153069 - 153605 253 ## COG3539 P pilus assembly protein, pilin FimA - Prom 153806 - 153865 6.2 137 70 Tu 1 . - CDS 153943 - 154824 650 ## COG0583 Transcriptional regulator - Prom 154865 - 154924 2.8 + Prom 154788 - 154847 2.8 138 71 Tu 1 . + CDS 154882 - 155910 778 ## COG1275 Tellurite resistance protein and related permeases + Term 156042 - 156083 8.6 + Prom 156073 - 156132 6.8 139 72 Op 1 7/0.129 + CDS 156163 - 156471 168 ## COG0640 Predicted transcriptional regulators 140 72 Op 2 . + CDS 156481 - 157014 492 ## COG0607 Rhodanese-related sulfurtransferase 141 73 Tu 1 . - CDS 157069 - 157404 236 ## - Prom 157547 - 157606 2.5 - Term 157616 - 157659 12.2 142 74 Op 1 . - CDS 157667 - 158860 583 ## COG0477 Permeases of the major facilitator superfamily - Prom 158916 - 158975 3.6 143 74 Op 2 . - CDS 159094 - 159459 236 ## - Prom 159511 - 159570 5.5 144 75 Tu 1 . - CDS 159585 - 160457 21 ## COG3710 DNA-binding winged-HTH domains - Prom 160578 - 160637 12.3 + Prom 160843 - 160902 2.6 145 76 Tu 1 . + CDS 160929 - 161504 133 ## + Prom 161510 - 161569 4.2 146 77 Tu 1 . + CDS 161718 - 168677 5558 ## COG3468 Type V secretory pathway, adhesin AidA + Term 168697 - 168722 -0.5 147 78 Tu 1 . + CDS 169869 - 172811 1984 ## COG3468 Type V secretory pathway, adhesin AidA + Term 172843 - 172873 5.0 148 79 Tu 1 . - CDS 172882 - 173574 365 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 173655 - 173714 4.5 + Prom 173614 - 173673 8.3 149 80 Op 1 . + CDS 173727 - 173861 86 ## + Prom 173939 - 173998 2.6 150 80 Op 2 . + CDS 174018 - 174827 484 ## COG1349 Transcriptional regulators of sugar metabolism + Prom 174874 - 174933 6.2 151 81 Op 1 16/0.000 + CDS 174973 - 175977 1061 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 175990 - 176028 -0.5 152 81 Op 2 21/0.000 + CDS 176042 - 177556 852 ## COG1129 ABC-type sugar transport system, ATPase component 153 81 Op 3 11/0.041 + CDS 177549 - 178541 825 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 154 81 Op 4 1/0.524 + CDS 178555 - 179601 834 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 155 81 Op 5 2/0.408 + CDS 179601 - 180482 506 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 156 81 Op 6 . + CDS 180493 - 181974 761 ## COG1070 Sugar (pentulose and hexulose) kinases + Term 181989 - 182037 12.5 - Term 182389 - 182432 8.4 157 82 Op 1 . - CDS 182577 - 183152 341 ## ACICU_02708 hypothetical protein 158 82 Op 2 . - CDS 183199 - 183474 183 ## VIBHAR_p08261 hypothetical protein - Prom 183531 - 183590 5.3 - Term 184222 - 184255 -0.6 159 83 Tu 1 . - CDS 184497 - 185153 89 ## 160 84 Tu 1 . - CDS 185261 - 186301 425 ## PP_3708 hypothetical protein - Prom 186323 - 186382 3.4 - Term 186368 - 186402 4.0 161 85 Op 1 . - CDS 186493 - 187599 89 ## COG0582 Integrase 162 85 Op 2 . - CDS 187601 - 187867 224 ## XBJ1_0984 repressor protein CI + Prom 188166 - 188225 3.2 163 86 Op 1 . + CDS 188322 - 188582 270 ## Ent638_3512 hypothetical protein 164 86 Op 2 . + CDS 188615 - 189118 388 ## SSPA2446 putative phage gene 165 86 Op 3 . + CDS 189131 - 189334 156 ## YPTS_3593 hypothetical protein 166 86 Op 4 . + CDS 189321 - 189701 260 ## YPTS_3592 hypothetical protein 167 86 Op 5 . + CDS 189711 - 190118 248 ## ECL_02861 hypothetical protein + Term 190140 - 190178 4.4 168 87 Op 1 . + CDS 190198 - 190437 290 ## ECUMN_0968 hypothetical protein 169 87 Op 2 . + CDS 190428 - 191243 399 ## COG0338 Site-specific DNA methylase 170 87 Op 3 . + CDS 191236 - 191529 263 ## 171 87 Op 4 . + CDS 191529 - 193589 1210 ## YPTS_3589 replication gene A + Prom 193656 - 193715 5.1 172 88 Tu 1 . + CDS 193756 - 193920 95 ## - Term 193860 - 193886 0.3 173 89 Op 1 . - CDS 193894 - 194163 124 ## YPK_0895 transcriptional activator Ogr/delta 174 89 Op 2 . - CDS 194214 - 195185 781 ## COG5518 Bacteriophage capsid portal protein 175 89 Op 3 . - CDS 195242 - 197014 1271 ## COG5484 Uncharacterized conserved protein + Prom 197089 - 197148 4.5 176 90 Op 1 . + CDS 197180 - 198022 634 ## ECUMN_0976 putative capsid scaffolding protein from bacteriophage origin 177 90 Op 2 . + CDS 198089 - 199117 932 ## Dd586_0744 phage major capsid protein, P2 family 178 90 Op 3 . + CDS 199121 - 199819 514 ## Dd586_0745 small terminase subunit 179 90 Op 4 . + CDS 199914 - 200366 452 ## SeHA_C3488 phage head completion protein 180 90 Op 5 . + CDS 200363 - 200863 336 ## ECL_02848 hypothetical protein 181 90 Op 6 . + CDS 200860 - 201570 594 ## ECL_02847 hypothetical protein 182 90 Op 7 . + CDS 201567 - 202697 1095 ## SSPA2435 putative phage gene 183 90 Op 8 . + CDS 202694 - 203149 453 ## ECL_02845 putative tail tube protein 184 90 Op 9 . + CDS 203159 - 203449 325 ## XBJ1_1006 holin 185 90 Op 10 . + CDS 203446 - 203787 437 ## ECUMN_0985 hypothetical protein 186 90 Op 11 . + CDS 203787 - 204149 229 ## ECUMN_0986 hypothetical protein 187 90 Op 12 . + CDS 204046 - 204294 138 ## SNSL254_A2924 hypothetical protein 188 90 Op 13 . + CDS 204284 - 204547 355 ## SeHA_C3479 phage protein 189 90 Op 14 . + CDS 204592 - 204738 72 ## XBJ1_1011 hypothetical protein 190 90 Op 15 . + CDS 204735 - 206912 1638 ## ECUMN_0988 putative tail tape measure protein from bacteriophage origin 191 90 Op 16 . + CDS 206909 - 207238 246 ## Dd586_0758 protein of unknown function DUF2590 192 90 Op 17 . + CDS 207235 - 208419 1013 ## ECL_02836 hypothetical protein 193 90 Op 18 . + CDS 208412 - 209008 608 ## ECUMN_0991 hypothetical protein 194 90 Op 19 . + CDS 209010 - 211244 1188 ## SeAg_B2783 phage tail fiber repeat-containing protein 195 90 Op 20 . + CDS 211249 - 211776 350 ## COG5525 Bacteriophage tail assembly protein 196 90 Op 21 . + CDS 211766 - 212491 462 ## ECUMN_0994 hypothetical protein 197 90 Op 22 . + CDS 212463 - 213008 542 ## YPK_0917 hypothetical protein 198 90 Op 23 . + CDS 213012 - 214688 1040 ## ECL_02828 hypothetical protein + Term 214707 - 214735 3.0 + Prom 215704 - 215763 5.5 199 91 Tu 1 . + CDS 215789 - 216439 254 ## + Term 216444 - 216496 12.2 - Term 216433 - 216481 6.3 200 92 Tu 1 . - CDS 216531 - 217355 241 ## YPTS_3563 hypothetical protein - Prom 217385 - 217444 2.9 201 93 Tu 1 . - CDS 217869 - 218390 425 ## COG0691 tmRNA-binding protein - Prom 218467 - 218526 2.3 + Prom 218426 - 218485 5.5 202 94 Op 1 9/0.054 + CDS 218509 - 218943 324 ## COG2867 Oligoketide cyclase/lipid transport protein 203 94 Op 2 . + CDS 218936 - 219220 305 ## COG2914 Uncharacterized protein conserved in bacteria + Term 219221 - 219247 -0.7 - Term 219201 - 219243 7.9 204 95 Tu 1 . - CDS 219298 - 219648 400 ## COG2913 Small protein A (tmRNA-binding) - Prom 219675 - 219734 4.0 205 96 Op 1 17/0.000 - CDS 219761 - 221422 1443 ## COG0497 ATPase involved in DNA repair - Prom 221459 - 221518 4.8 206 96 Op 2 . - CDS 221520 - 222398 642 ## COG0061 Predicted sugar kinase - Prom 222430 - 222489 2.4 + Prom 222330 - 222389 3.4 207 97 Tu 1 . + CDS 222522 - 223109 769 ## COG0576 Molecular chaperone GrpE (heat shock protein) + Term 223132 - 223159 0.1 - Term 223111 - 223156 1.5 208 98 Tu 1 . - CDS 223164 - 223859 605 ## COG0692 Uracil DNA glycosylase - Prom 223999 - 224058 8.1 + Prom 223994 - 224053 6.7 209 99 Tu 1 . + CDS 224240 - 224623 472 ## COG3445 Acid-induced glycyl radical enzyme + Term 224648 - 224693 3.1 210 100 Tu 1 . - CDS 224564 - 224731 65 ## - Prom 224761 - 224820 5.3 - Term 224878 - 224905 -0.9 211 101 Tu 1 . - CDS 224927 - 226255 1366 ## COG0513 Superfamily II DNA and RNA helicases - Prom 226304 - 226363 2.6 + Prom 226326 - 226385 4.5 212 102 Tu 1 . + CDS 226405 - 227154 277 ## COG4123 Predicted O-methyltransferase + Term 227199 - 227227 -0.1 + Prom 227194 - 227253 4.2 213 103 Tu 1 . + CDS 227410 - 228789 1470 ## COG1114 Branched-chain amino acid permeases + Term 228811 - 228843 5.6 - Term 228799 - 228831 5.6 214 104 Tu 1 . - CDS 228872 - 230473 1301 ## COG0029 Aspartate oxidase - Prom 230560 - 230619 4.0 215 105 Op 1 11/0.041 + CDS 230688 - 231263 358 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 216 105 Op 2 10/0.041 + CDS 231293 - 231937 568 ## COG3073 Negative regulator of sigma E activity 217 105 Op 3 8/0.095 + CDS 231937 - 232899 666 ## COG3026 Negative regulator of sigma E activity 218 105 Op 4 4/0.313 + CDS 232896 - 233360 357 ## COG3086 Positive regulator of sigma E activity + Prom 233371 - 233430 2.1 219 106 Op 1 . + CDS 233493 - 235286 1805 ## COG0481 Membrane GTPase LepA + Term 235301 - 235333 2.2 220 106 Op 2 . + CDS 235404 - 236378 993 ## COG0681 Signal peptidase I + Term 236392 - 236438 12.3 + Prom 236392 - 236451 6.1 221 107 Op 1 18/0.000 + CDS 236676 - 237356 558 ## COG0571 dsRNA-specific ribonuclease 222 107 Op 2 16/0.000 + CDS 237353 - 238258 866 ## COG1159 GTPase 223 107 Op 3 9/0.054 + CDS 238271 - 238999 657 ## COG1381 Recombinational DNA repair protein (RecF pathway) + Prom 239035 - 239094 1.7 224 108 Op 1 8/0.095 + CDS 239131 - 239862 727 ## COG0854 Pyridoxal phosphate biosynthesis protein 225 108 Op 2 . + CDS 239862 - 240242 424 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) + Term 240254 - 240292 4.4 - Term 240232 - 240261 -0.2 226 109 Tu 1 . - CDS 240295 - 243036 1838 ## COG0642 Signal transduction histidine kinase - Prom 243114 - 243173 3.9 + Prom 243021 - 243080 1.5 227 110 Op 1 8/0.095 + CDS 243113 - 244429 876 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 228 110 Op 2 . + CDS 244463 - 246706 1969 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases + Term 246713 - 246752 7.5 + Prom 247041 - 247100 3.6 229 111 Op 1 6/0.177 + CDS 247247 - 248071 376 ## COG2199 FOG: GGDEF domain 230 111 Op 2 . + CDS 248084 - 250666 1421 ## COG2200 FOG: EAL domain + Term 250737 - 250766 0.2 231 112 Op 1 1/0.524 - CDS 250758 - 251354 590 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 232 112 Op 2 2/0.408 - CDS 251367 - 252308 790 ## COG3327 Phenylacetic acid-responsive transcriptional repressor - Prom 252340 - 252399 1.7 - Term 252373 - 252414 8.6 233 113 Op 1 1/0.524 - CDS 252424 - 253728 945 ## COG1541 Coenzyme F390 synthetase 234 113 Op 2 1/0.524 - CDS 253809 - 255014 1126 ## COG0183 Acetyl-CoA acetyltransferase 235 113 Op 3 1/0.524 - CDS 255011 - 255460 343 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 236 113 Op 4 7/0.129 - CDS 255457 - 257013 1091 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 237 113 Op 5 12/0.020 - CDS 257016 - 257822 705 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 238 113 Op 6 1/0.524 - CDS 257827 - 258600 622 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 239 113 Op 7 2/0.408 - CDS 258610 - 259668 903 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 240 113 Op 8 4/0.313 - CDS 259684 - 260193 358 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme 241 113 Op 9 5/0.265 - CDS 260221 - 260982 651 ## COG3396 Uncharacterized conserved protein 242 113 Op 10 5/0.265 - CDS 260992 - 261279 334 ## COG3460 Uncharacterized enzyme of phenylacetate metabolism 243 113 Op 11 . - CDS 261294 - 262238 855 ## COG3396 Uncharacterized conserved protein - Prom 262357 - 262416 6.3 + Prom 262359 - 262418 7.6 244 114 Op 1 . + CDS 262558 - 264630 1497 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 264656 - 264686 3.4 245 114 Op 2 5/0.265 + CDS 264717 - 265496 951 ## COG1694 Predicted pyrophosphatase + Term 265512 - 265570 7.5 + Prom 265589 - 265648 5.9 246 115 Op 1 8/0.095 + CDS 265791 - 267428 1615 ## COG0504 CTP synthase (UTP-ammonia lyase) + Term 267438 - 267490 4.1 247 115 Op 2 . + CDS 267512 - 268816 1398 ## COG0148 Enolase + Term 268842 - 268883 11.3 - Term 268823 - 268873 7.4 248 116 Tu 1 . - CDS 268940 - 269167 150 ## COG2841 Uncharacterized protein conserved in bacteria + Prom 269425 - 269484 5.5 249 117 Op 1 31/0.000 + CDS 269521 - 270291 718 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 270298 - 270340 3.4 + Prom 270312 - 270371 5.8 250 117 Op 2 34/0.000 + CDS 270398 - 271162 645 ## COG0765 ABC-type amino acid transport system, permease component 251 117 Op 3 . + CDS 271149 - 271871 618 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 271907 - 271949 -0.5 252 118 Tu 1 2/0.408 - CDS 271922 - 273355 1031 ## COG1113 Gamma-aminobutyrate permease and related permeases - Term 273388 - 273432 1.6 253 119 Op 1 6/0.177 - CDS 273520 - 275055 1471 ## COG2986 Histidine ammonia-lyase 254 119 Op 2 . - CDS 275055 - 276743 1464 ## COG2987 Urocanate hydratase - Prom 276852 - 276911 9.5 - Term 277024 - 277070 8.0 255 120 Op 1 . - CDS 277098 - 277553 415 ## gi|238755855|ref|ZP_04617185.1| hypothetical protein yruck0001_11520 256 120 Op 2 . - CDS 277566 - 277910 338 ## 257 120 Op 3 . - CDS 277982 - 278908 880 ## - Prom 279008 - 279067 6.0 258 121 Op 1 3/0.367 - CDS 279230 - 280084 981 ## COG3118 Thioredoxin domain-containing protein 259 121 Op 2 5/0.265 - CDS 280156 - 280929 708 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 260 121 Op 3 . - CDS 280984 - 281622 392 ## COG2755 Lysophospholipase L1 and related esterases - Prom 281747 - 281806 4.0 + Prom 281477 - 281536 1.6 261 122 Op 1 11/0.041 + CDS 281593 - 282279 313 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 262 122 Op 2 . + CDS 282276 - 284681 1937 ## COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component + Term 284700 - 284733 -0.5 + Prom 284811 - 284870 6.7 263 123 Tu 1 . + CDS 284925 - 286343 535 ## COG2199 FOG: GGDEF domain + Term 286365 - 286396 2.4 - Term 286353 - 286384 2.4 264 124 Op 1 29/0.000 - CDS 286395 - 287465 854 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 265 124 Op 2 . - CDS 287462 - 287986 605 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase - Prom 288181 - 288240 5.1 + Prom 288140 - 288199 3.5 266 125 Op 1 . + CDS 288301 - 288852 393 ## COG5529 Pyocin large subunit 267 125 Op 2 . + CDS 288855 - 289601 758 ## COG1484 DNA replication protein 268 126 Op 1 8/0.095 - CDS 289629 - 290354 495 ## COG2908 Uncharacterized protein conserved in bacteria 269 126 Op 2 . - CDS 290365 - 290859 542 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 290896 - 290955 3.7 + Prom 291057 - 291116 3.4 270 127 Tu 1 . + CDS 291147 - 292532 1568 ## COG0215 Cysteinyl-tRNA synthetase + Term 292557 - 292587 3.0 - Term 292539 - 292580 5.0 271 128 Tu 1 . - CDS 292598 - 292810 332 ## COG2501 Uncharacterized conserved protein - Prom 292862 - 292921 4.6 - Term 292933 - 292979 2.1 272 129 Op 1 . - CDS 293037 - 294404 1267 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 294545 - 294604 3.5 - Term 294641 - 294669 2.3 273 129 Op 2 . - CDS 294693 - 295550 779 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase - Prom 295772 - 295831 79.6 + TRNA 295755 - 295831 97.1 # Arg TCT 0 0 + Prom 296072 - 296131 2.4 274 130 Tu 1 . + CDS 296158 - 296457 121 ## COG3791 Uncharacterized conserved protein + Term 296679 - 296720 0.7 + Prom 296667 - 296726 8.7 275 131 Op 1 5/0.265 + CDS 296907 - 298019 620 ## COG1690 Uncharacterized conserved protein 276 131 Op 2 . + CDS 298016 - 298633 365 ## COG1186 Protein chain release factor B + Term 298641 - 298679 3.5 + Prom 298761 - 298820 4.3 277 132 Tu 1 . + CDS 298948 - 299208 114 ## PC1_0372 putative PAS/PAC sensor protein + Term 299277 - 299337 -0.6 + Prom 299388 - 299447 2.5 278 133 Op 1 4/0.313 + CDS 299534 - 300139 532 ## COG0558 Phosphatidylglycerophosphate synthase 279 133 Op 2 5/0.265 + CDS 300136 - 301053 651 ## COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase 280 133 Op 3 2/0.408 + CDS 301057 - 301698 440 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 281 133 Op 4 5/0.265 + CDS 301691 - 303451 1434 ## COG0500 SAM-dependent methyltransferases 282 133 Op 5 . + CDS 303448 - 304734 445 ## COG0671 Membrane-associated phospholipid phosphatase + Prom 304751 - 304810 4.4 283 134 Tu 1 . + CDS 304938 - 305129 127 ## Pecwa_2362 hypothetical protein - Term 305239 - 305275 6.4 284 135 Tu 1 . - CDS 305283 - 305735 203 ## COG4682 Predicted membrane protein - Prom 305765 - 305824 3.8 - Term 305783 - 305817 -0.9 285 136 Tu 1 . - CDS 305994 - 306203 113 ## + Prom 306371 - 306430 5.7 286 137 Tu 1 . + CDS 306455 - 306616 58 ## 287 138 Tu 1 . - CDS 307409 - 308974 773 ## COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains - Prom 308994 - 309053 2.2 - Term 308996 - 309040 5.2 288 139 Op 1 2/0.408 - CDS 309078 - 310361 460 ## COG0814 Amino acid permeases - Prom 310388 - 310447 4.3 289 139 Op 2 . - CDS 310522 - 311715 713 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases - Prom 311880 - 311939 7.6 + Prom 312162 - 312221 8.4 290 140 Tu 1 . + CDS 312330 - 314576 1586 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 314589 - 314628 8.4 - Term 314464 - 314500 -1.0 291 141 Tu 1 . - CDS 314622 - 315548 519 ## COG2819 Predicted hydrolase of the alpha/beta superfamily - Prom 315789 - 315848 7.0 + Prom 315783 - 315842 4.8 292 142 Tu 1 . + CDS 315973 - 316170 178 ## Spro_2057 hypothetical protein + Term 316283 - 316324 1.5 - Term 316185 - 316249 4.5 293 143 Op 1 . - CDS 316269 - 316475 241 ## YE1594 hypothetical protein 294 143 Op 2 . - CDS 316526 - 317101 479 ## COG1309 Transcriptional regulator - Prom 317228 - 317287 4.6 + Prom 317166 - 317225 7.7 295 144 Op 1 . + CDS 317451 - 318377 562 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 296 144 Op 2 . + CDS 318398 - 318745 239 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 318782 - 318825 2.4 297 145 Tu 1 . + CDS 319236 - 320561 1165 ## COG0534 Na+-driven multidrug efflux pump + Term 320564 - 320627 9.7 298 146 Op 1 5/0.265 - CDS 320624 - 321769 1197 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 299 146 Op 2 4/0.313 - CDS 321766 - 322557 533 ## COG2186 Transcriptional regulators 300 146 Op 3 . - CDS 322554 - 324209 1271 ## COG1620 L-lactate permease - Prom 324287 - 324346 4.8 301 147 Tu 1 . - CDS 324568 - 325461 488 ## COG0583 Transcriptional regulator - Prom 325486 - 325545 4.9 + Prom 325448 - 325507 4.2 302 148 Tu 1 . + CDS 325646 - 326041 434 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain + Term 326104 - 326149 -0.1 + Prom 326095 - 326154 4.4 303 149 Tu 1 . + CDS 326247 - 326660 245 ## COG2351 Transthyretin-like protein + Term 326694 - 326725 2.3 304 150 Tu 1 . - CDS 326731 - 327345 203 ## COG1309 Transcriptional regulator - Prom 327384 - 327443 1.7 + Prom 327790 - 327849 4.0 305 151 Op 1 27/0.000 + CDS 327938 - 329101 1216 ## COG0845 Membrane-fusion protein 306 151 Op 2 . + CDS 329140 - 332262 2720 ## COG0841 Cation/multidrug efflux pump + Term 332285 - 332321 4.0 307 152 Tu 1 . - CDS 332501 - 333115 439 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 333214 - 333273 2.4 - Term 333181 - 333221 2.1 308 153 Op 1 2/0.408 - CDS 333288 - 333602 249 ## COG3254 Uncharacterized conserved protein 309 153 Op 2 5/0.265 - CDS 333612 - 334760 1248 ## COG1454 Alcohol dehydrogenase, class IV - Term 334767 - 334830 1.5 310 154 Op 1 5/0.265 - CDS 334837 - 335661 706 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 311 154 Op 2 6/0.177 - CDS 335686 - 336942 1171 ## COG4806 L-rhamnose isomerase 312 154 Op 3 . - CDS 336939 - 338414 1180 ## COG1070 Sugar (pentulose and hexulose) kinases - Prom 338434 - 338493 1.8 313 155 Tu 1 8/0.095 + CDS 338750 - 339571 490 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 339624 - 339683 1.7 314 156 Op 1 1/0.524 + CDS 339706 - 340566 639 ## COG2207 AraC-type DNA-binding domain-containing proteins 315 156 Op 2 . + CDS 340639 - 341556 888 ## COG4989 Predicted oxidoreductase + Term 341580 - 341615 5.1 + Prom 341587 - 341646 6.3 316 157 Tu 1 . + CDS 341676 - 342128 222 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 342135 - 342188 -0.7 - Term 342058 - 342106 5.5 317 158 Op 1 . - CDS 342135 - 343559 1069 ## COG2160 L-arabinose isomerase 318 158 Op 2 . - CDS 343570 - 344604 981 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 344819 - 344878 2.9 + Prom 344929 - 344988 7.0 319 159 Tu 1 . + CDS 345015 - 345338 334 ## NT01EI_2950 hypothetical protein + Term 345366 - 345400 5.1 - Term 345313 - 345358 0.4 320 160 Tu 1 . - CDS 345396 - 345818 283 ## COG0607 Rhodanese-related sulfurtransferase - Prom 345953 - 346012 2.1 + Prom 345845 - 345904 2.7 321 161 Tu 1 . + CDS 345928 - 346905 438 ## COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain + Term 346979 - 347013 -0.3 + Prom 346909 - 346968 3.2 322 162 Tu 1 . + CDS 347023 - 347220 312 ## COG1826 Sec-independent protein secretion pathway components + Term 347249 - 347309 9.2 - Term 347297 - 347339 2.5 323 163 Op 1 13/0.014 - CDS 347402 - 348349 801 ## COG0320 Lipoate synthase 324 163 Op 2 6/0.177 - CDS 348360 - 349028 558 ## COG0321 Lipoate-protein ligase B - Prom 349048 - 349107 7.5 - Term 349093 - 349140 13.2 325 164 Op 1 9/0.054 - CDS 349187 - 349465 362 ## COG2921 Uncharacterized conserved protein - Term 349473 - 349510 7.1 326 164 Op 2 12/0.020 - CDS 349560 - 350771 1201 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 350811 - 350870 5.0 327 165 Op 1 8/0.095 - CDS 350935 - 352032 917 ## COG0797 Lipoproteins 328 165 Op 2 19/0.000 - CDS 352041 - 353153 894 ## COG0772 Bacterial cell division membrane protein 329 165 Op 3 9/0.054 - CDS 353173 - 355068 1709 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 - Term 355105 - 355148 7.4 330 166 Op 1 14/0.014 - CDS 355155 - 355625 450 ## COG1576 Uncharacterized conserved protein 331 166 Op 2 14/0.014 - CDS 355629 - 355946 304 ## COG0799 Uncharacterized homolog of plant Iojap protein - Prom 356051 - 356110 1.7 332 167 Op 1 7/0.129 - CDS 356122 - 356784 428 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 333 167 Op 2 12/0.020 - CDS 356774 - 357808 765 ## COG1466 DNA polymerase III, delta subunit 334 167 Op 3 9/0.054 - CDS 357805 - 358527 733 ## COG2980 Rare lipoprotein B 335 167 Op 4 . - CDS 358557 - 361139 2736 ## COG0495 Leucyl-tRNA synthetase - Prom 361351 - 361410 3.4 + Prom 361310 - 361369 5.3 336 168 Tu 1 . + CDS 361553 - 362035 559 ## YE2995 hypothetical protein + Term 362040 - 362090 5.8 - Term 362036 - 362073 7.1 337 169 Op 1 1/0.524 - CDS 362090 - 363022 831 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase 338 169 Op 2 4/0.313 - CDS 363034 - 363984 889 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase - Prom 364033 - 364092 3.8 339 170 Op 1 34/0.000 - CDS 364187 - 364912 561 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 340 170 Op 2 17/0.000 - CDS 364912 - 365586 574 ## COG0765 ABC-type amino acid transport system, permease component 341 170 Op 3 . - CDS 365586 - 366326 646 ## COG0765 ABC-type amino acid transport system, permease component 342 170 Op 4 . - CDS 366317 - 366544 70 ## - Prom 366566 - 366625 2.7 343 171 Tu 1 . - CDS 366667 - 367581 977 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Term 368071 - 368106 4.1 344 172 Tu 1 . - CDS 368115 - 368702 416 ## COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - Prom 368730 - 368789 2.5 345 173 Op 1 9/0.054 - CDS 368846 - 370369 1390 ## COG0815 Apolipoprotein N-acyltransferase 346 173 Op 2 11/0.041 - CDS 370377 - 371261 922 ## COG4535 Putative Mg2+ and Co2+ transporter CorC - Prom 371289 - 371348 5.0 - Term 371325 - 371363 3.0 347 174 Op 1 17/0.000 - CDS 371373 - 371846 583 ## COG0319 Predicted metal-dependent hydrolase 348 174 Op 2 10/0.041 - CDS 371873 - 372931 1108 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase - Prom 373085 - 373144 6.1 349 175 Tu 1 . - CDS 373277 - 374701 494 ## PROTEIN SUPPORTED gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase - Prom 374907 - 374966 3.0 + Prom 374896 - 374955 4.7 350 176 Tu 1 . + CDS 374986 - 376161 963 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases + Term 376221 - 376267 2.0 - TRNA 376259 - 376333 75.8 # Gln CTG 0 0 351 177 Tu 1 . + CDS 376388 - 376558 90 ## - TRNA 376424 - 376498 75.8 # Gln CTG 0 0 - TRNA 376501 - 376577 96.2 # Met CAT 0 0 - TRNA 376623 - 376697 75.3 # Gln TTG 0 0 - TRNA 376748 - 376822 75.3 # Gln TTG 0 0 - TRNA 376849 - 376933 76.2 # Leu TAG 0 0 - TRNA 376962 - 377038 96.2 # Met CAT 0 0 - Term 377217 - 377251 5.2 352 178 Tu 1 . - CDS 377265 - 378932 1680 ## COG0367 Asparagine synthase (glutamine-hydrolyzing) - Prom 379000 - 379059 4.0 - Term 379189 - 379224 -0.8 353 179 Tu 1 . - CDS 379261 - 380013 803 ## COG0647 Predicted sugar phosphatases of the HAD superfamily - Prom 380160 - 380219 3.8 354 180 Op 1 7/0.129 - CDS 380344 - 381576 284 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 355 180 Op 2 12/0.020 - CDS 381652 - 382803 981 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase 356 180 Op 3 . - CDS 382831 - 383631 701 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase - Prom 383848 - 383907 5.1 + Prom 383831 - 383890 8.2 357 181 Tu 1 . + CDS 383963 - 386002 2023 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 386031 - 386078 9.1 + Prom 386147 - 386206 3.2 358 182 Tu 1 . + CDS 386245 - 387912 1580 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 387950 - 387991 10.4 359 183 Op 1 . + CDS 388481 - 389866 1556 ## ECL_03034 putative outer membrane porin 360 183 Op 2 . + CDS 389924 - 390253 397 ## Spro_1231 putative lipoprotein 361 183 Op 3 . + CDS 390274 - 392946 2675 ## COG3525 N-acetyl-beta-hexosaminidase + Term 393069 - 393098 1.2 - Term 393144 - 393183 2.7 362 184 Tu 1 . - CDS 393200 - 393649 364 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 393746 - 393805 6.5 - Term 393920 - 393956 5.5 363 185 Tu 1 . - CDS 393969 - 394496 538 ## COG0716 Flavodoxins - Prom 394518 - 394577 4.6 - Term 394536 - 394570 2.1 364 186 Tu 1 . - CDS 394618 - 394893 338 ## YE2970 LexA regulated protein - Prom 395022 - 395081 5.2 - Term 395155 - 395190 1.1 365 187 Tu 1 . - CDS 395207 - 395977 750 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 396041 - 396100 6.0 + Prom 396156 - 396215 4.3 366 188 Op 1 6/0.177 + CDS 396245 - 396787 433 ## COG3057 Negative regulator of replication initiationR 367 188 Op 2 . + CDS 396865 - 398511 1463 ## COG0033 Phosphoglucomutase + Term 398539 - 398569 3.0 + Prom 398550 - 398609 6.4 368 189 Tu 1 . + CDS 398646 - 398966 386 ## YPDSF_0648 hypothetical protein + Term 399140 - 399173 -0.3 369 190 Op 1 16/0.000 - CDS 398991 - 399680 547 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 370 190 Op 2 15/0.007 - CDS 399691 - 402381 2040 ## COG2205 Osmosensitive K+ channel histidine kinase 371 190 Op 3 18/0.000 - CDS 402405 - 403001 591 ## COG2156 K+-transporting ATPase, c chain - Prom 403065 - 403124 2.6 - Term 403025 - 403071 2.3 372 190 Op 4 20/0.000 - CDS 403185 - 405251 2053 ## COG2216 High-affinity K+ transport system, ATPase chain B 373 190 Op 5 . - CDS 405263 - 406951 1452 ## COG2060 K+-transporting ATPase, A chain - Prom 407092 - 407151 8.2 + Prom 407077 - 407136 4.8 374 191 Tu 1 . + CDS 407300 - 407797 286 ## + Prom 407800 - 407859 5.2 375 192 Tu 1 . + CDS 408049 - 408249 165 ## NT01EI_2887 hypothetical protein + Term 408274 - 408318 4.2 + Prom 408332 - 408391 4.5 376 193 Op 1 1/0.524 + CDS 408450 - 409397 690 ## COG1683 Uncharacterized conserved protein 377 193 Op 2 1/0.524 + CDS 409452 - 410882 831 ## COG0415 Deoxyribodipyrimidine photolyase 378 193 Op 3 1/0.524 + CDS 410917 - 411900 798 ## COG5212 Low-affinity cAMP phosphodiesterase 379 193 Op 4 . + CDS 411932 - 412675 874 ## COG0327 Uncharacterized conserved protein + Term 412691 - 412739 11.0 380 194 Tu 1 . - CDS 412733 - 413068 272 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism - Prom 413197 - 413256 6.0 381 195 Tu 1 . - CDS 413308 - 414243 746 ## COG0583 Transcriptional regulator - Prom 414271 - 414330 4.1 - Term 414312 - 414347 4.1 382 196 Tu 1 . - CDS 414361 - 415575 960 ## COG0477 Permeases of the major facilitator superfamily 383 197 Tu 1 . - CDS 415772 - 416608 666 ## COG0005 Purine nucleoside phosphorylase - Prom 416661 - 416720 3.9 + Prom 416679 - 416738 5.4 384 198 Op 1 21/0.000 + CDS 416908 - 417564 564 ## COG2049 Allophanate hydrolase subunit 1 385 198 Op 2 8/0.095 + CDS 417558 - 418487 748 ## COG1984 Allophanate hydrolase subunit 2 386 198 Op 3 3/0.367 + CDS 418480 - 419214 546 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 387 198 Op 4 . + CDS 419284 - 420075 701 ## COG0266 Formamidopyrimidine-DNA glycosylase + Term 420094 - 420133 3.6 - Term 420079 - 420124 7.5 388 199 Tu 1 . - CDS 420145 - 421428 1234 ## COG0372 Citrate synthase 389 200 Op 1 24/0.000 + CDS 422260 - 422649 220 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 390 200 Op 2 22/0.000 + CDS 422643 - 423005 304 ## COG2142 Succinate dehydrogenase, hydrophobic anchor subunit 391 200 Op 3 36/0.000 + CDS 423007 - 424788 1875 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 392 200 Op 4 5/0.265 + CDS 424839 - 425555 653 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit + Term 425575 - 425605 1.2 + Prom 425693 - 425752 2.6 393 201 Op 1 21/0.000 + CDS 425883 - 428690 2551 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes 394 201 Op 2 6/0.177 + CDS 428765 - 429979 1507 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes + Term 430010 - 430039 0.3 + Prom 429988 - 430047 2.7 395 202 Op 1 39/0.000 + CDS 430177 - 431343 1298 ## COG0045 Succinyl-CoA synthetase, beta subunit 396 202 Op 2 2/0.408 + CDS 431343 - 432212 1060 ## COG0074 Succinyl-CoA synthetase, alpha subunit + Term 432279 - 432308 1.2 397 203 Op 1 31/0.000 + CDS 433003 - 434565 1664 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 398 203 Op 2 . + CDS 434580 - 435719 1224 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 399 203 Op 3 . + CDS 435732 - 435845 141 ## 400 203 Op 4 7/0.129 + CDS 435845 - 436138 162 ## COG3790 Predicted membrane protein + Term 436162 - 436215 12.5 + Prom 436144 - 436203 4.7 401 204 Op 1 13/0.014 + CDS 436294 - 436689 214 ## COG0824 Predicted thioesterase 402 204 Op 2 30/0.000 + CDS 436686 - 437369 677 ## COG0811 Biopolymer transport proteins 403 204 Op 3 8/0.095 + CDS 437383 - 437805 492 ## COG0848 Biopolymer transport protein + Term 437853 - 437901 12.6 + Prom 437809 - 437868 3.1 404 205 Tu 1 . + CDS 438079 - 439212 1294 ## COG3064 Membrane protein involved in colicin uptake + Prom 439296 - 439355 3.9 405 206 Op 1 20/0.000 + CDS 439394 - 440686 1225 ## COG0823 Periplasmic component of the Tol biopolymer transport system 406 206 Op 2 13/0.014 + CDS 440735 - 441250 542 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 407 206 Op 3 6/0.177 + CDS 441273 - 442076 505 ## COG1729 Uncharacterized protein conserved in bacteria + Term 442283 - 442352 24.7 + TRNA 442257 - 442332 95.3 # Lys TTT 0 0 + TRNA 442373 - 442448 95.3 # Lys TTT 0 0 + TRNA 442506 - 442581 95.3 # Lys TTT 0 0 + TRNA 442610 - 442685 95.3 # Lys TTT 0 0 408 207 Op 1 5/0.265 + CDS 443006 - 444058 643 ## COG0379 Quinolinate synthase 409 207 Op 2 . + CDS 444084 - 444812 676 ## COG3201 Nicotinamide mononucleotide transporter + Term 444830 - 444871 6.3 + Prom 444858 - 444917 6.2 410 208 Tu 1 . + CDS 445156 - 446556 907 ## COG4992 Ornithine/acetylornithine aminotransferase + Term 446572 - 446625 9.5 - Term 446560 - 446613 10.1 411 209 Op 1 . - CDS 446645 - 447607 613 ## COG1230 Co/Zn/Cd efflux system component - Prom 447635 - 447694 3.4 412 209 Op 2 . - CDS 447719 - 448315 44 ## COG1266 Predicted metal-dependent membrane protease - Prom 448454 - 448513 7.5 + Prom 448419 - 448478 3.6 413 210 Tu 1 . + CDS 448500 - 448679 135 ## + Prom 448724 - 448783 3.5 414 211 Tu 1 . + CDS 448820 - 449872 892 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase + Term 449894 - 449920 1.0 - Term 449882 - 449908 1.0 415 212 Tu 1 . - CDS 449939 - 450361 430 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 450449 - 450508 7.3 - Term 450537 - 450596 14.1 416 213 Op 1 . - CDS 450608 - 451360 771 ## COG0588 Phosphoglycerate mutase 1 - Prom 451397 - 451456 6.7 417 213 Op 2 . - CDS 451568 - 451921 297 ## YPTB1167 putative starvation-inducible protein - Prom 452024 - 452083 3.1 - Term 452110 - 452149 7.1 418 214 Op 1 11/0.041 - CDS 452165 - 455305 2755 ## COG3696 Putative silver efflux pump 419 214 Op 2 . - CDS 455302 - 456819 1155 ## COG0845 Membrane-fusion protein 420 214 Op 3 . - CDS 456816 - 458072 1318 ## Pecwa_3073 outer membrane efflux protein 421 214 Op 4 . - CDS 458085 - 458456 324 ## Dd703_1168 hypothetical protein - Term 458495 - 458539 -1.0 422 214 Op 5 . - CDS 458545 - 458970 280 ## ECA1387 hypothetical protein - Prom 458999 - 459058 3.5 - Term 459389 - 459440 6.3 423 215 Op 1 6/0.177 - CDS 459554 - 460609 863 ## COG2017 Galactose mutarotase and related enzymes 424 215 Op 2 8/0.095 - CDS 460603 - 461760 917 ## COG0153 Galactokinase 425 215 Op 3 3/0.367 - CDS 461771 - 462820 918 ## COG1085 Galactose-1-phosphate uridylyltransferase 426 215 Op 4 1/0.524 - CDS 462843 - 463859 858 ## COG1087 UDP-glucose 4-epimerase - Prom 464069 - 464128 4.7 - Term 464067 - 464128 -0.0 427 216 Tu 1 . - CDS 464133 - 464948 706 ## COG1266 Predicted metal-dependent membrane protease - Prom 464976 - 465035 4.4 428 217 Tu 1 . - CDS 465056 - 466522 1116 ## COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA - Term 466610 - 466657 -0.5 429 218 Tu 1 . - CDS 466676 - 467467 878 ## COG2005 N-terminal domain of molybdenum-binding protein - Prom 467564 - 467623 2.6 + Prom 467564 - 467623 5.0 430 219 Tu 1 . + CDS 467674 - 467823 145 ## ROD_07581 hypothetical protein + Term 467845 - 467875 5.0 + Prom 467932 - 467991 4.8 431 220 Op 1 23/0.000 + CDS 468029 - 468796 897 ## COG0725 ABC-type molybdate transport system, periplasmic component 432 220 Op 2 13/0.014 + CDS 468796 - 469485 580 ## COG4149 ABC-type molybdate transport system, permease component 433 220 Op 3 . + CDS 469491 - 470549 853 ## COG4148 ABC-type molybdate transport system, ATPase component + Term 470570 - 470614 2.1 - Term 471053 - 471108 5.2 434 221 Tu 1 . - CDS 471143 - 471961 877 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 471987 - 472046 5.0 435 222 Tu 1 . - CDS 472071 - 475328 2229 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family - Prom 475432 - 475491 5.2 436 223 Tu 1 . - CDS 475515 - 477278 1459 ## COG0405 Gamma-glutamyltransferase - Prom 477399 - 477458 3.2 - Term 477436 - 477485 6.0 437 224 Tu 1 . - CDS 477507 - 478796 840 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase - Prom 478919 - 478978 3.1 + Prom 478808 - 478867 5.2 438 225 Op 1 12/0.020 + CDS 478903 - 479940 1098 ## COG0502 Biotin synthase and related enzymes 439 225 Op 2 6/0.177 + CDS 479940 - 481097 576 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 440 225 Op 3 9/0.054 + CDS 481078 - 481845 484 ## COG0500 SAM-dependent methyltransferases 441 225 Op 4 . + CDS 481838 - 482545 383 ## COG0132 Dethiobiotin synthetase + Term 482547 - 482601 1.4 + Prom 482612 - 482671 3.2 442 226 Op 1 . + CDS 482702 - 482956 82 ## Dd1591_1131 hypothetical protein 443 226 Op 2 . + CDS 482966 - 483499 286 ## Slit_1140 prophage CP4-57 regulatory + Prom 484297 - 484356 1.9 444 227 Tu 1 . + CDS 484425 - 486443 1872 ## COG0556 Helicase subunit of the DNA excision repair complex + Prom 486457 - 486516 1.7 445 228 Tu 1 . + CDS 486562 - 486858 271 ## COG4628 Uncharacterized conserved protein + Term 486890 - 486945 -0.9 446 229 Tu 1 . - CDS 486923 - 487459 474 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 487494 - 487553 3.6 + Prom 487392 - 487451 4.1 447 230 Tu 1 . + CDS 487564 - 488457 526 ## COG0583 Transcriptional regulator 448 231 Tu 1 . - CDS 488474 - 488902 415 ## COG2128 Uncharacterized conserved protein - Prom 489000 - 489059 3.7 + Prom 488740 - 488799 4.3 449 232 Op 1 . + CDS 489034 - 490485 511 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 450 232 Op 2 . + CDS 490543 - 491487 723 ## COG0042 tRNA-dihydrouridine synthase + Term 491682 - 491708 -0.6 451 233 Tu 1 . - CDS 491504 - 492424 658 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 492472 - 492531 3.7 + Prom 492441 - 492500 4.1 452 234 Tu 1 . + CDS 492628 - 493416 651 ## COG4106 Trans-aconitate methyltransferase + Term 493431 - 493466 0.0 + Prom 493457 - 493516 4.3 453 235 Tu 1 . + CDS 493765 - 494712 678 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 494758 - 494797 8.1 + Prom 494794 - 494853 2.8 454 236 Tu 1 . + CDS 494879 - 495802 826 ## COG2354 Uncharacterized protein conserved in bacteria + Term 495923 - 495974 6.3 + Prom 496023 - 496082 2.5 455 237 Tu 1 . + CDS 496227 - 496463 121 ## - Term 496584 - 496610 -0.7 456 238 Tu 1 . - CDS 496662 - 497474 874 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 497624 - 497683 7.4 + Prom 497443 - 497502 7.2 457 239 Tu 1 . + CDS 497742 - 498332 442 ## SEN2163 hypothetical protein + Term 498389 - 498425 6.3 458 240 Op 1 . - CDS 498495 - 498839 397 ## SG0423 hypothetical protein 459 240 Op 2 . - CDS 498918 - 499016 127 ## - Prom 499124 - 499183 5.4 + Prom 499066 - 499125 8.5 460 241 Op 1 . + CDS 499212 - 500297 548 ## COG3239 Fatty acid desaturase 461 241 Op 2 13/0.014 + CDS 500246 - 501178 1062 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) + Term 501194 - 501228 3.1 462 242 Op 1 24/0.000 + CDS 501272 - 502423 970 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 463 242 Op 2 24/0.000 + CDS 502483 - 503355 829 ## COG1125 ABC-type proline/glycine betaine transport systems, ATPase components 464 242 Op 3 . + CDS 503355 - 504137 422 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 465 242 Op 4 . + CDS 504141 - 504932 398 ## COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component + Term 504953 - 504995 5.2 - Term 504892 - 504929 5.3 466 243 Op 1 1/0.524 - CDS 504945 - 505400 415 ## COG1671 Uncharacterized protein conserved in bacteria 467 243 Op 2 4/0.313 - CDS 505400 - 506317 671 ## COG0408 Coproporphyrinogen III oxidase - Prom 506347 - 506406 3.0 468 244 Tu 1 . - CDS 506440 - 507312 625 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 507409 - 507468 2.0 + Prom 507368 - 507427 5.8 469 245 Op 1 . + CDS 507601 - 510747 1618 ## COG3250 Beta-galactosidase/beta-glucuronidase 470 245 Op 2 . + CDS 510820 - 511245 458 ## COG0456 Acetyltransferases 471 246 Tu 1 . + CDS 511323 - 511772 380 ## SSPA0392 hypothetical protein + Term 511790 - 511826 -1.0 472 247 Tu 1 . - CDS 511716 - 511898 95 ## + Prom 511802 - 511861 2.7 473 248 Op 1 . + CDS 511897 - 512481 529 ## PC1_0763 hypothetical protein + Term 512515 - 512551 3.2 + Prom 512551 - 512610 2.6 474 248 Op 2 . + CDS 512729 - 513628 889 ## COG2837 Predicted iron-dependent peroxidase + Term 513644 - 513684 7.4 + Prom 514087 - 514146 4.7 475 249 Op 1 7/0.129 + CDS 514202 - 515206 1001 ## COG4150 ABC-type sulfate transport system, periplasmic component 476 249 Op 2 17/0.000 + CDS 515206 - 516045 901 ## COG0555 ABC-type sulfate transport system, permease component 477 249 Op 3 17/0.000 + CDS 516045 - 516923 717 ## COG4208 ABC-type sulfate transport system, permease component 478 249 Op 4 5/0.265 + CDS 516920 - 518014 1048 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component + Term 518048 - 518097 1.0 + Prom 518051 - 518110 2.2 479 250 Tu 1 . + CDS 518132 - 519016 521 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Term 519080 - 519125 5.6 480 251 Tu 1 . - CDS 519138 - 519692 320 ## gi|10955257|ref|NP_052373.1| protein K - Prom 519728 - 519787 2.9 - Term 519853 - 519902 5.3 481 252 Op 1 10/0.041 - CDS 519911 - 520420 592 ## COG2190 Phosphotransferase system IIA components 482 252 Op 2 25/0.000 - CDS 520467 - 522194 1807 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 483 252 Op 3 6/0.177 - CDS 522245 - 522502 352 ## COG1925 Phosphotransferase system, HPr-related proteins - Prom 522683 - 522742 4.3 - Term 522847 - 522875 1.0 484 253 Op 1 8/0.095 - CDS 522903 - 523871 704 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 523907 - 523966 3.8 485 253 Op 2 . - CDS 524060 - 524641 407 ## COG2981 Uncharacterized protein involved in cysteine biosynthesis - Prom 524881 - 524940 9.2 + Prom 524823 - 524882 5.3 486 254 Op 1 7/0.129 + CDS 525080 - 526099 744 ## COG3115 Cell division protein + Term 526127 - 526163 5.6 487 254 Op 2 3/0.367 + CDS 526178 - 528214 1745 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) + Term 528232 - 528266 1.8 488 254 Op 3 . + CDS 528283 - 528504 329 ## COG3530 Uncharacterized protein conserved in bacteria + Term 528508 - 528537 2.1 - Term 528496 - 528525 2.1 489 255 Op 1 . - CDS 528545 - 528949 345 ## 490 255 Op 2 6/0.177 - CDS 528930 - 530207 779 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 491 255 Op 3 . - CDS 530204 - 532318 1343 ## COG0726 Predicted xylanase/chitin deacetylase 492 255 Op 4 . - CDS 532315 - 533526 724 ## BPP2318 putative hemin storage protein 493 255 Op 5 . - CDS 533553 - 534251 413 ## RSp0286 putative hemin-binding outer membrane transmembrane protein - Prom 534485 - 534544 5.4 + Prom 534589 - 534648 8.2 494 256 Tu 1 . + CDS 534731 - 535447 335 ## COG3710 DNA-binding winged-HTH domains + Term 535509 - 535561 2.2 + Prom 535520 - 535579 6.3 495 257 Op 1 . + CDS 535715 - 536386 447 ## NT01EI_1250 hypothetical protein 496 257 Op 2 . + CDS 536329 - 536556 57 ## - TRNA 536487 - 536562 95.3 # Lys TTT 0 0 - TRNA 536570 - 536645 94.3 # Val TAC 0 0 - TRNA 536715 - 536790 94.3 # Val TAC 0 0 - TRNA 536839 - 536914 94.3 # Val TAC 0 0 - TRNA 536981 - 537056 94.3 # Val TAC 0 0 - TRNA 537120 - 537195 94.3 # Val TAC 0 0 + Prom 537508 - 537567 5.1 497 258 Tu 1 . + CDS 537594 - 539009 1480 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 539039 - 539064 -0.5 - Term 539021 - 539060 2.4 498 259 Op 1 . - CDS 539120 - 539332 189 ## 499 259 Op 2 . - CDS 539364 - 539759 300 ## ETAE_1140 hypothetical protein - Prom 539816 - 539875 6.6 + TRNA 540019 - 540094 86.5 # Ala GGC 0 0 + TRNA 540171 - 540246 86.5 # Ala GGC 0 0 - Term 540443 - 540468 -0.5 500 260 Tu 1 . - CDS 540497 - 541699 1309 ## COG1972 Nucleoside permease - Prom 541876 - 541935 5.4 501 261 Tu 1 . + CDS 542165 - 543337 1015 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family + Term 543360 - 543398 9.5 - Term 543348 - 543386 9.5 502 262 Tu 1 . - CDS 543399 - 543824 427 ## YPTB2704 hypothetical protein - Prom 543902 - 543961 4.3 + Prom 543904 - 543963 2.7 503 263 Tu 1 . + CDS 544018 - 544584 540 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Term 544508 - 544545 6.0 504 264 Tu 1 . - CDS 544581 - 545570 890 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 545780 - 545839 2.5 + Prom 545511 - 545570 2.9 505 265 Op 1 . + CDS 545642 - 545845 80 ## 506 265 Op 2 . + CDS 545793 - 547466 1176 ## COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes + Term 547520 - 547555 4.0 - Term 547257 - 547318 3.1 507 266 Tu 1 . - CDS 547483 - 548352 438 ## COG0583 Transcriptional regulator - Prom 548585 - 548644 3.5 + Prom 548293 - 548352 2.4 508 267 Op 1 . + CDS 548460 - 548912 472 ## COG4125 Predicted membrane protein 509 267 Op 2 . + CDS 548985 - 549686 602 ## COG1794 Aspartate racemase + Term 549731 - 549767 -0.4 510 267 Op 3 . + CDS 549866 - 550831 946 ## COG0837 Glucokinase + Term 550857 - 550907 8.5 - Term 550851 - 550887 6.5 511 268 Tu 1 . - CDS 550925 - 551326 301 ## YE0960 acid-resistance protein - Prom 551521 - 551580 9.5 - Term 551528 - 551565 3.1 512 269 Op 1 9/0.054 - CDS 551602 - 552336 690 ## COG3279 Response regulator of the LytR/AlgR family 513 269 Op 2 . - CDS 552333 - 554024 1322 ## COG3275 Putative regulator of cell autolysis - Prom 554077 - 554136 5.6 - Term 554165 - 554218 7.0 514 270 Tu 1 . - CDS 554235 - 554609 563 ## SG1969 hypothetical protein - Prom 554660 - 554719 2.3 + Prom 554649 - 554708 4.0 515 271 Tu 1 . + CDS 554802 - 555134 206 ## COG1416 Uncharacterized conserved protein + Term 555146 - 555198 4.4 + Prom 555371 - 555430 8.6 516 272 Op 1 7/0.129 + CDS 555631 - 557127 1591 ## COG3131 Periplasmic glucans biosynthesis protein 517 272 Op 2 . + CDS 557120 - 559669 1824 ## COG2943 Membrane glycosyltransferase + Term 559688 - 559741 11.2 - Term 559678 - 559727 8.2 518 273 Tu 1 . - CDS 559749 - 560570 560 ## ETAE_1151 hypothetical protein - Prom 560603 - 560662 2.6 519 274 Op 1 1/0.524 - CDS 560700 - 561164 333 ## PROTEIN SUPPORTED gi|154175150|ref|YP_001408716.1| 30S ribosomal protein S15 520 274 Op 2 9/0.054 - CDS 561226 - 562005 648 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 521 274 Op 3 . - CDS 562008 - 563246 1124 ## COG0303 Molybdopterin biosynthesis enzyme - Prom 563372 - 563431 3.8 - Term 563602 - 563635 2.9 522 275 Op 1 12/0.020 - CDS 563653 - 564498 671 ## COG0627 Predicted esterase 523 275 Op 2 1/0.524 - CDS 564592 - 565716 1155 ## COG1062 Zn-dependent alcohol dehydrogenases, class III 524 275 Op 3 . - CDS 565703 - 566677 754 ## COG0583 Transcriptional regulator - Prom 566707 - 566766 5.5 + Prom 566660 - 566719 4.2 525 276 Tu 1 . + CDS 566810 - 567970 1011 ## COG0477 Permeases of the major facilitator superfamily + Prom 567998 - 568057 3.6 526 277 Op 1 4/0.313 + CDS 568111 - 568773 611 ## COG0302 GTP cyclohydrolase I + Term 568801 - 568831 3.3 527 277 Op 2 4/0.313 + CDS 568860 - 570071 958 ## COG2311 Predicted membrane protein + Prom 570183 - 570242 1.6 528 278 Tu 1 . + CDS 570296 - 571294 882 ## COG1609 Transcriptional regulators + Term 571346 - 571377 1.1 529 279 Op 1 16/0.000 + CDS 571653 - 572651 1075 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 572711 - 572754 10.7 + Prom 572675 - 572734 1.6 530 279 Op 2 10/0.041 + CDS 572776 - 574374 198 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 531 279 Op 3 . + CDS 574408 - 575418 1053 ## COG4211 ABC-type glucose/galactose transport system, permease component - Term 575529 - 575563 0.7 532 280 Tu 1 . - CDS 575712 - 576458 629 ## COG2949 Uncharacterized membrane protein - Prom 576495 - 576554 3.9 - Term 576569 - 576598 2.1 533 281 Tu 1 . - CDS 576637 - 578334 1416 ## COG0281 Malic enzyme - Prom 578410 - 578469 4.6 - Term 578505 - 578538 6.1 534 282 Tu 1 . - CDS 578549 - 579433 831 ## COG0295 Cytidine deaminase - Prom 579501 - 579560 5.1 535 283 Op 1 23/0.000 - CDS 579634 - 580326 514 ## COG1346 Putative effector of murein hydrolase 536 283 Op 2 1/0.524 - CDS 580326 - 580733 280 ## COG1380 Putative effector of murein hydrolase LrgA - Prom 580757 - 580816 3.5 537 284 Tu 1 . - CDS 580870 - 582087 806 ## COG0477 Permeases of the major facilitator superfamily - Prom 582161 - 582220 5.4 538 285 Tu 1 . - CDS 582345 - 582602 99 ## - Prom 582679 - 582738 5.1 - Term 582816 - 582853 6.0 539 286 Op 1 6/0.177 - CDS 582874 - 584154 1194 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 540 286 Op 2 4/0.313 - CDS 584160 - 585656 1226 ## COG1012 NAD-dependent aldehyde dehydrogenases 541 286 Op 3 1/0.524 - CDS 585749 - 586306 538 ## COG1396 Predicted transcriptional regulators 542 286 Op 4 . - CDS 586319 - 587047 515 ## COG2071 Predicted glutamine amidotransferases - Prom 587216 - 587275 4.0 + Prom 587194 - 587253 5.3 543 287 Op 1 . + CDS 587318 - 588736 1243 ## COG0174 Glutamine synthetase + Prom 588818 - 588877 2.8 544 287 Op 2 . + CDS 588968 - 590290 1349 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases + Term 590297 - 590338 5.0 + Prom 590303 - 590362 2.2 545 288 Op 1 . + CDS 590556 - 590774 111 ## 546 288 Op 2 . + CDS 590764 - 592152 1258 ## COG0531 Amino acid transporters + Term 592170 - 592203 4.5 547 289 Tu 1 . - CDS 592252 - 593178 602 ## COG2962 Predicted permeases - Prom 593199 - 593258 4.2 548 290 Tu 1 . - CDS 593308 - 594732 1129 ## COG2925 Exonuclease I - Prom 594761 - 594820 2.7 + Prom 594844 - 594903 5.0 549 291 Tu 1 . + CDS 594945 - 596003 636 ## COG1289 Predicted membrane protein + Term 596007 - 596068 8.3 + Prom 596236 - 596295 10.3 550 292 Tu 1 6/0.177 + CDS 596456 - 597031 578 ## COG3539 P pilus assembly protein, pilin FimA + Term 597057 - 597088 2.1 + Prom 597090 - 597149 10.0 551 293 Op 1 10/0.041 + CDS 597235 - 599634 1520 ## COG3188 P pilus assembly protein, porin PapC 552 293 Op 2 . + CDS 599650 - 600384 439 ## COG3121 P pilus assembly protein, chaperone PapD 553 293 Op 3 . + CDS 600387 - 601436 457 ## LF82_p512 Yqi fimbrial adhesin + Term 601441 - 601488 3.6 - Term 601427 - 601475 11.1 554 294 Op 1 14/0.014 - CDS 601478 - 602530 1017 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components 555 294 Op 2 16/0.000 - CDS 602670 - 603776 1003 ## COG4176 ABC-type proline/glycine betaine transport system, permease component 556 294 Op 3 . - CDS 603773 - 604972 869 ## COG4175 ABC-type proline/glycine betaine transport system, ATPase component - Prom 604993 - 605052 3.5 + Prom 605293 - 605352 4.0 557 295 Op 1 4/0.313 + CDS 605428 - 607617 1252 ## COG1199 Rad3-related DNA helicases + Prom 607621 - 607680 5.4 558 295 Op 2 . + CDS 607708 - 608622 559 ## COG0547 Anthranilate phosphoribosyltransferase + Term 608668 - 608695 0.1 + Prom 608818 - 608877 7.9 559 296 Tu 1 . + CDS 608959 - 610110 842 ## COG3765 Chain length determinant protein + Term 610126 - 610164 4.3 - Term 610120 - 610147 1.5 560 297 Tu 1 . - CDS 610178 - 611578 1052 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 611739 - 611798 5.0 - Term 611942 - 611983 1.4 561 298 Tu 1 . - CDS 612019 - 612603 437 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - Prom 612771 - 612830 4.9 562 299 Op 1 3/0.367 - CDS 613007 - 613708 394 ## COG0671 Membrane-associated phospholipid phosphatase 563 299 Op 2 . - CDS 613744 - 614730 650 ## COG0523 Putative GTPases (G3E family) - Prom 614803 - 614862 6.4 564 300 Tu 1 . + CDS 615093 - 615422 174 ## NT01EI_2585 hypothetical protein + Term 615460 - 615500 9.1 + Prom 615551 - 615610 3.7 565 301 Tu 1 . + CDS 615640 - 616383 596 ## COG2186 Transcriptional regulators + Term 616404 - 616432 -0.9 + Prom 616415 - 616474 3.6 566 302 Tu 1 . + CDS 616567 - 618099 699 ## COG2200 FOG: EAL domain + Term 618119 - 618160 2.1 567 303 Tu 1 . - CDS 618152 - 619618 1304 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Prom 619771 - 619830 5.3 + Prom 619875 - 619934 3.4 568 304 Tu 1 . + CDS 620065 - 621255 1213 ## COG1312 D-mannonate dehydratase + Term 621275 - 621318 7.2 - Term 621271 - 621300 2.1 569 305 Tu 1 . - CDS 621322 - 621894 620 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 621939 - 621998 3.8 - Term 622001 - 622033 5.0 570 306 Tu 1 . - CDS 622052 - 623302 1205 ## COG0814 Amino acid permeases + Prom 623058 - 623117 2.4 571 307 Tu 1 . + CDS 623349 - 623495 63 ## 572 308 Tu 1 . + CDS 623682 - 623945 97 ## COG0727 Predicted Fe-S-cluster oxidoreductase 573 309 Tu 1 . - CDS 623942 - 624277 62 ## - Prom 624303 - 624362 6.1 + Prom 624262 - 624321 5.8 574 310 Tu 1 . + CDS 624541 - 627333 2118 ## COG3933 Transcriptional antiterminator + Term 627334 - 627360 -0.7 + Prom 627415 - 627474 4.9 575 311 Op 1 9/0.054 + CDS 627562 - 627906 239 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 576 311 Op 2 13/0.014 + CDS 627957 - 628442 564 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 577 311 Op 3 13/0.014 + CDS 628486 - 629238 809 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 578 311 Op 4 . + CDS 629235 - 630101 813 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 579 311 Op 5 . + CDS 630113 - 631237 773 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 580 311 Op 6 . + CDS 631224 - 631967 654 ## SeSA_A3974 hypothetical protein + Term 631986 - 632025 8.4 581 312 Tu 1 . - CDS 632036 - 633214 959 ## COG0477 Permeases of the major facilitator superfamily - Prom 633257 - 633316 4.9 - Term 633432 - 633459 1.5 582 313 Op 1 7/0.129 - CDS 633490 - 636006 2587 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 583 313 Op 2 . - CDS 636019 - 637182 849 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit - Prom 637353 - 637412 6.1 + Prom 637337 - 637396 6.4 584 314 Tu 1 . + CDS 637548 - 638723 997 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 638732 - 638780 -0.6 585 315 Tu 1 . - CDS 638755 - 639021 243 ## COG1734 DnaK suppressor protein - Prom 639223 - 639282 12.4 - Term 639312 - 639358 -0.4 586 316 Op 1 24/0.000 - CDS 639440 - 640069 606 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 587 316 Op 2 23/0.000 - CDS 640063 - 640839 843 ## COG0107 Imidazoleglycerol-phosphate synthase 588 316 Op 3 25/0.000 - CDS 640821 - 641558 873 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 589 316 Op 4 18/0.000 - CDS 641573 - 642181 549 ## COG0118 Glutamine amidotransferase 590 316 Op 5 13/0.014 - CDS 642181 - 643170 878 ## COG0131 Imidazoleglycerol-phosphate dehydratase 591 316 Op 6 19/0.000 - CDS 643245 - 644348 1084 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 592 316 Op 7 18/0.000 - CDS 644348 - 645700 1052 ## COG0141 Histidinol dehydrogenase 593 316 Op 8 . - CDS 645706 - 646605 858 ## COG0040 ATP phosphoribosyltransferase 594 317 Tu 1 . + CDS 647278 - 648105 701 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Term 648224 - 648259 0.2 595 318 Tu 1 . - CDS 648392 - 649708 1309 ## PROTEIN SUPPORTED gi|227993272|ref|ZP_04040336.1| SSU ribosomal protein S12P methylthiotransferase - Prom 649744 - 649803 5.1 + Prom 649674 - 649733 3.5 596 319 Tu 1 . + CDS 649873 - 650412 260 ## PROTEIN SUPPORTED gi|227377549|ref|ZP_03861010.1| acetyltransferase, ribosomal protein N-acetylase - Term 650387 - 650421 4.0 597 320 Tu 1 . - CDS 650449 - 651645 891 ## COG0477 Permeases of the major facilitator superfamily - Prom 651708 - 651767 2.1 598 321 Op 1 . - CDS 652051 - 652872 711 ## COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II 599 321 Op 2 . - CDS 652923 - 653816 603 ## COG4886 Leucine-rich repeat (LRR) protein - Prom 653850 - 653909 2.6 + Prom 653963 - 654022 2.4 600 322 Tu 1 . + CDS 654048 - 654686 540 ## COG1280 Putative threonine efflux protein + Term 654716 - 654763 4.4 + Prom 654841 - 654900 7.9 601 323 Op 1 . + CDS 655128 - 655865 814 ## Spro_2136 gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3) 602 323 Op 2 2/0.408 + CDS 655869 - 657653 1684 ## COG2303 Choline dehydrogenase and related flavoproteins 603 323 Op 3 . + CDS 657666 - 658994 1124 ## COG2010 Cytochrome c, mono- and diheme variants + Term 659002 - 659034 3.0 + Prom 659181 - 659240 5.0 604 324 Tu 1 . + CDS 659424 - 660569 1041 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 660586 - 660620 5.2 - Term 660823 - 660863 2.4 605 325 Tu 1 10/0.041 - CDS 660877 - 662244 1160 ## COG1760 L-serine deaminase 606 326 Tu 1 1/0.524 - CDS 662412 - 663701 1333 ## COG0814 Amino acid permeases - Prom 663821 - 663880 2.7 - Term 664489 - 664536 6.8 607 327 Tu 1 . - CDS 664578 - 665342 591 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 665560 - 665619 4.4 - Term 665574 - 665605 2.5 608 328 Tu 1 . - CDS 665621 - 666229 459 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 666353 - 666412 4.0 609 329 Tu 1 . - CDS 666530 - 667774 776 ## COG0477 Permeases of the major facilitator superfamily - Prom 667854 - 667913 4.5 + Prom 668260 - 668319 4.4 610 330 Op 1 . + CDS 668463 - 668726 183 ## 611 330 Op 2 . + CDS 668754 - 670130 353 ## COG5529 Pyocin large subunit - Term 671303 - 671361 5.2 612 331 Tu 1 . - CDS 671375 - 673063 1560 ## COG2985 Predicted permease - Prom 673093 - 673152 3.7 613 332 Tu 1 . + CDS 673402 - 673800 264 ## NT01EI_2529 hypothetical protein + Term 673828 - 673858 4.3 - Term 673809 - 673854 8.8 614 333 Tu 1 . - CDS 673870 - 674133 325 ## COG0695 Glutaredoxin and related proteins - Prom 674187 - 674246 4.4 + Prom 674127 - 674186 4.1 615 334 Op 1 . + CDS 674299 - 674604 258 ## YE1481 hypothetical protein 616 334 Op 2 4/0.313 + CDS 674588 - 675310 600 ## COG0778 Nitroreductase 617 334 Op 3 . + CDS 675338 - 676225 1199 ## PROTEIN SUPPORTED gi|50121603|ref|YP_050770.1| ribosomal protein S6 modification protein + Term 676239 - 676292 12.7 - Term 676033 - 676075 4.5 618 335 Tu 1 . - CDS 676222 - 676416 227 ## NT01CX_1350 hypothetical protein - Prom 676473 - 676532 2.5 + Prom 676432 - 676491 3.9 619 336 Tu 1 . + CDS 676559 - 677050 564 ## NT01EI_2526 hypothetical protein + Term 677085 - 677126 6.2 620 337 Tu 1 13/0.014 + CDS 677445 - 678551 1137 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Term 678596 - 678642 11.2 + Prom 678561 - 678620 4.1 621 338 Op 1 30/0.000 + CDS 678705 - 679838 1010 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 622 338 Op 2 36/0.000 + CDS 679848 - 680810 804 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 623 338 Op 3 . + CDS 680810 - 681655 586 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II + Term 681675 - 681734 3.3 624 339 Tu 1 . + CDS 681735 - 682211 300 ## YPDSF_2361 hypothetical protein + Prom 682231 - 682290 4.6 625 340 Tu 1 . + CDS 682333 - 683466 867 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Term 683493 - 683546 1.3 - Term 683366 - 683409 -0.8 626 341 Tu 1 . - CDS 683454 - 683942 469 ## COG0350 Methylated DNA-protein cysteine methyltransferase - Prom 684006 - 684065 3.2 627 342 Tu 1 . + CDS 684021 - 684209 152 ## 628 343 Tu 1 4/0.313 - CDS 684184 - 684915 866 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 685055 - 685114 7.7 - Term 685099 - 685128 0.4 629 344 Op 1 12/0.020 - CDS 685156 - 685824 640 ## COG4160 ABC-type arginine/histidine transport system, permease component 630 344 Op 2 12/0.020 - CDS 685824 - 686540 672 ## COG4215 ABC-type arginine transport system, permease component 631 345 Op 1 7/0.129 - CDS 686780 - 687511 778 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 632 345 Op 2 . - CDS 687590 - 688318 464 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 688344 - 688403 5.3 - Term 688949 - 688980 0.1 633 346 Tu 1 . - CDS 689030 - 689350 471 ## COG0393 Uncharacterized conserved protein + Prom 689175 - 689234 1.9 634 347 Tu 1 . + CDS 689391 - 690248 680 ## COG3023 Negative regulator of beta-lactamase expression 635 348 Tu 1 . - CDS 690242 - 691261 767 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 691498 - 691557 3.1 636 349 Tu 1 . - CDS 691681 - 693126 1080 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases - Prom 693152 - 693211 6.6 - Term 693245 - 693282 4.0 637 350 Tu 1 . - CDS 693297 - 694349 1038 ## COG2008 Threonine aldolase - Prom 694404 - 694463 3.0 - Term 694642 - 694675 6.5 638 351 Tu 1 . - CDS 694711 - 696432 1364 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 696550 - 696609 5.5 - Term 696635 - 696678 12.8 639 352 Op 1 2/0.408 - CDS 696695 - 697696 718 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Term 697705 - 697740 3.8 640 352 Op 2 2/0.408 - CDS 697764 - 699416 1876 ## COG1151 6Fe-6S prismane cluster-containing protein - Prom 699496 - 699555 2.2 641 353 Tu 1 . - CDS 699629 - 700528 805 ## COG2431 Predicted membrane protein - Prom 700554 - 700613 2.4 642 354 Tu 1 . + CDS 700752 - 702422 1271 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family + Term 702434 - 702491 22.1 643 355 Tu 1 . - CDS 702494 - 703282 464 ## COG2990 Uncharacterized protein conserved in bacteria - Prom 703310 - 703369 2.2 - Term 703762 - 703792 -0.2 644 356 Tu 1 . - CDS 703829 - 704050 227 ## COG1278 Cold shock proteins + Prom 704337 - 704396 2.6 645 357 Op 1 19/0.000 + CDS 704626 - 704949 221 ## COG2127 Uncharacterized conserved protein 646 357 Op 2 . + CDS 704976 - 707252 1368 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 707278 - 707318 5.6 - Term 707265 - 707308 4.1 647 358 Op 1 5/0.265 - CDS 707433 - 707651 261 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 - Prom 707686 - 707745 3.6 648 358 Op 2 5/0.265 - CDS 707747 - 708478 391 ## COG2360 Leu/Phe-tRNA-protein transferase 649 358 Op 3 14/0.014 - CDS 708547 - 710268 245 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 650 358 Op 4 . - CDS 710271 - 711962 1351 ## COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components - Prom 712132 - 712191 3.2 651 359 Tu 1 . - CDS 712273 - 713172 388 ## COG0583 Transcriptional regulator - Prom 713217 - 713276 3.3 + Prom 713179 - 713238 2.3 652 360 Tu 1 . + CDS 713301 - 714584 925 ## COG3631 Ketosteroid isomerase-related protein + Term 714786 - 714826 -0.4 653 361 Tu 1 . - CDS 714645 - 715613 711 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 - Prom 715644 - 715703 7.1 + Prom 716334 - 716393 3.5 654 362 Tu 1 . + CDS 716438 - 716932 535 ## COG1522 Transcriptional regulators + Term 716991 - 717032 8.5 + Prom 716956 - 717015 3.0 655 363 Tu 1 . + CDS 717244 - 720885 2899 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Term 720913 - 720947 7.0 + Prom 721007 - 721066 3.0 656 364 Op 1 8/0.095 + CDS 721177 - 721788 565 ## COG2834 Outer membrane lipoprotein-sorting protein 657 364 Op 2 8/0.095 + CDS 721817 - 723160 1265 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase + Term 723202 - 723240 3.2 + Prom 723190 - 723249 2.0 658 365 Tu 1 . + CDS 723269 - 724561 1290 ## COG0172 Seryl-tRNA synthetase + Term 724576 - 724612 2.3 - Term 724570 - 724595 -0.5 659 366 Tu 1 . - CDS 724673 - 724849 69 ## - Prom 725011 - 725070 5.7 + Prom 725010 - 725069 6.1 660 367 Op 1 16/0.000 + CDS 725096 - 727540 1917 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 661 367 Op 2 9/0.054 + CDS 727551 - 728168 410 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 662 367 Op 3 4/0.313 + CDS 728170 - 729030 870 ## COG3302 DMSO reductase anchor subunit + Term 729058 - 729095 7.1 663 368 Op 1 6/0.177 + CDS 729144 - 729758 630 ## COG3381 Uncharacterized component of anaerobic dehydrogenases 664 368 Op 2 1/0.524 + CDS 729758 - 730345 73 ## COG1145 Ferredoxin + Term 730367 - 730411 -0.1 665 368 Op 3 . + CDS 730420 - 731601 795 ## COG0477 Permeases of the major facilitator superfamily + Term 731622 - 731664 9.9 - Term 731618 - 731643 -0.5 666 369 Tu 1 . - CDS 731673 - 732128 394 ## NT01EI_2470 hypothetical protein - Prom 732169 - 732228 4.6 - Term 732745 - 732785 7.1 667 370 Tu 1 . - CDS 732798 - 733538 749 ## COG1180 Pyruvate-formate lyase-activating enzyme - Prom 733726 - 733785 3.4 - Term 733760 - 733791 3.2 668 371 Op 1 7/0.129 - CDS 733824 - 736106 2363 ## COG1882 Pyruvate-formate lyase 669 371 Op 2 3/0.367 - CDS 736169 - 737026 737 ## COG2116 Formate/nitrite family of transporters - Prom 737144 - 737203 7.3 - Term 737515 - 737552 5.3 670 372 Tu 1 . - CDS 737569 - 739362 1890 ## COG1944 Uncharacterized conserved protein - Prom 739603 - 739662 5.0 + Prom 739368 - 739427 8.9 671 373 Op 1 . + CDS 739474 - 740520 1064 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D + Term 740539 - 740569 2.7 672 373 Op 2 4/0.313 + CDS 740616 - 741308 224 ## COG2323 Predicted membrane protein + Prom 741323 - 741382 3.1 673 374 Tu 1 . + CDS 741621 - 742709 991 ## COG1932 Phosphoserine aminotransferase + Term 742727 - 742763 5.2 + Prom 742747 - 742806 4.0 674 375 Tu 1 . + CDS 742864 - 744144 1030 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase + Term 744162 - 744192 2.5 + Prom 744313 - 744372 5.8 675 376 Op 1 21/0.000 + CDS 744480 - 745202 267 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 + Term 745236 - 745285 10.0 + Prom 745267 - 745326 4.7 676 376 Op 2 16/0.000 + CDS 745424 - 747103 2737 ## PROTEIN SUPPORTED gi|157369952|ref|YP_001477941.1| 30S ribosomal protein S1 677 376 Op 3 2/0.408 + CDS 747189 - 747473 245 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 747496 - 747526 3.0 + Prom 747491 - 747550 4.0 678 377 Op 1 5/0.265 + CDS 747722 - 749995 346 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) 679 377 Op 2 9/0.054 + CDS 750032 - 751780 200 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 680 377 Op 3 . + CDS 751777 - 752763 581 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase + Term 752803 - 752840 -0.9 + Prom 752778 - 752837 6.3 681 378 Tu 1 3/0.367 + CDS 753078 - 753287 286 ## COG1278 Cold shock proteins + Term 753336 - 753369 1.7 + Prom 753370 - 753429 2.9 682 379 Tu 1 . + CDS 753517 - 753726 257 ## COG1278 Cold shock proteins + Prom 753772 - 753831 5.2 683 380 Tu 1 . + CDS 753866 - 755113 745 ## COG3214 Uncharacterized protein conserved in bacteria + Term 755237 - 755266 -0.2 - Term 755317 - 755345 -1.0 684 381 Op 1 11/0.041 - CDS 755374 - 755832 410 ## COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 685 381 Op 2 . - CDS 755842 - 759066 2380 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs + Prom 759413 - 759472 5.5 686 382 Op 1 11/0.041 + CDS 759512 - 759688 211 ## COG2835 Uncharacterized conserved protein 687 382 Op 2 . + CDS 759693 - 760448 777 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase + Term 760482 - 760515 2.0 688 383 Tu 1 . + CDS 760579 - 761496 556 ## Spro_1720 hypothetical protein + Term 761528 - 761571 10.1 + Prom 761660 - 761719 3.9 689 384 Op 1 2/0.408 + CDS 761945 - 763360 386 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 763368 - 763410 5.5 690 384 Op 2 4/0.313 + CDS 763455 - 764951 378 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 691 384 Op 3 . + CDS 764926 - 766293 755 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 692 385 Op 1 . - CDS 766308 - 766571 135 ## ETAE_2163 hypothetical protein 693 385 Op 2 . - CDS 766568 - 767338 453 ## COG1434 Uncharacterized conserved protein - Prom 767372 - 767431 3.5 + Prom 767374 - 767433 3.6 694 386 Op 1 6/0.177 + CDS 767502 - 768299 709 ## COG0500 SAM-dependent methyltransferases 695 386 Op 2 7/0.129 + CDS 768296 - 769618 1318 ## COG3006 Uncharacterized protein involved in chromosome partitioning 696 386 Op 3 8/0.095 + CDS 769599 - 770327 699 ## COG3095 Uncharacterized protein involved in chromosome partitioning 697 386 Op 4 4/0.313 + CDS 770324 - 774778 4750 ## COG3096 Uncharacterized protein involved in chromosome partitioning + Term 774821 - 774851 -0.7 + Prom 774822 - 774881 9.3 698 387 Op 1 9/0.054 + CDS 775009 - 776835 1194 ## COG2989 Uncharacterized protein conserved in bacteria + Prom 776902 - 776961 3.7 699 387 Op 2 7/0.129 + CDS 777013 - 777561 515 ## COG3108 Uncharacterized protein conserved in bacteria + Term 777609 - 777642 5.2 + Prom 777590 - 777649 4.8 700 388 Tu 1 . + CDS 777677 - 778324 421 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 778354 - 778382 1.0 - Term 778337 - 778375 3.6 701 389 Tu 1 . - CDS 778391 - 779584 1304 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase - Prom 779695 - 779754 6.1 - Term 779813 - 779844 4.1 702 390 Tu 1 . - CDS 779885 - 780997 1303 ## COG3203 Outer membrane protein (porin) - Prom 781157 - 781216 9.8 - Term 781250 - 781286 10.3 703 391 Tu 1 . - CDS 781327 - 782727 1525 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases - Prom 782875 - 782934 5.7 - Term 782918 - 782966 7.4 704 392 Tu 1 . - CDS 783002 - 784207 951 ## COG1488 Nicotinic acid phosphoribosyltransferase - Prom 784263 - 784322 5.5 705 393 Tu 1 . - CDS 784424 - 786157 898 ## COG2199 FOG: GGDEF domain - Prom 786258 - 786317 3.0 + Prom 786509 - 786568 3.9 706 394 Tu 1 . + CDS 786600 - 789218 2303 ## COG0308 Aminopeptidase N + Term 789245 - 789273 3.0 + Prom 789438 - 789497 2.7 707 395 Tu 1 . + CDS 789527 - 790537 697 ## COG0167 Dihydroorotate dehydrogenase + Term 790554 - 790600 4.2 + Prom 790542 - 790601 4.3 708 396 Tu 1 . + CDS 790725 - 791273 487 ## Spro_1741 hypothetical protein - Term 791266 - 791298 3.0 709 397 Op 1 . - CDS 791374 - 792498 527 ## COG3217 Uncharacterized Fe-S protein - Prom 792522 - 792581 2.4 - Term 792500 - 792542 1.3 710 397 Op 2 . - CDS 792647 - 792865 303 ## ROD_14861 hypothetical protein - Prom 792908 - 792967 7.5 + Prom 793237 - 793296 3.5 711 398 Op 1 6/0.177 + CDS 793320 - 795446 2234 ## COG0116 Predicted N6-adenine-specific DNA methylase 712 398 Op 2 5/0.265 + CDS 795450 - 797357 1679 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 797382 - 797428 6.0 + Prom 797379 - 797438 6.5 713 399 Op 1 11/0.041 + CDS 797461 - 798729 639 ## COG2995 Uncharacterized paraquat-inducible protein A 714 399 Op 2 8/0.095 + CDS 798722 - 800362 1374 ## COG3008 Paraquat-inducible protein B 715 399 Op 3 3/0.367 + CDS 800362 - 800922 569 ## COG3009 Uncharacterized protein conserved in bacteria + Term 800953 - 800991 7.5 + Prom 800936 - 800995 4.0 716 400 Tu 1 . + CDS 801180 - 801347 82 ## COG3130 Ribosome modulation factor + Term 801377 - 801419 9.2 + Prom 801401 - 801460 6.5 717 401 Tu 1 . + CDS 801666 - 802607 459 ## COG0583 Transcriptional regulator + Term 802641 - 802669 1.0 - Term 802622 - 802664 7.1 718 402 Op 1 8/0.095 - CDS 802682 - 803200 567 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 719 402 Op 2 . - CDS 803269 - 805014 1257 ## COG1067 Predicted ATP-dependent protease - Prom 805134 - 805193 8.1 + Prom 805135 - 805194 5.2 720 403 Tu 1 . + CDS 805223 - 805681 423 ## COG3120 Uncharacterized protein conserved in bacteria + Term 805754 - 805782 3.0 - Term 805733 - 805781 10.4 721 404 Tu 1 . - CDS 805800 - 806855 974 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Prom 806990 - 807049 6.9 722 405 Tu 1 . - CDS 807213 - 807719 425 ## COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation - Prom 807742 - 807801 4.8 + Prom 807856 - 807915 4.8 723 406 Tu 1 . + CDS 807942 - 808562 293 ## COG3070 Regulator of competence-specific genes + Term 808582 - 808610 -0.9 724 407 Op 1 5/0.265 - CDS 808625 - 810760 1352 ## COG1289 Predicted membrane protein 725 407 Op 2 . - CDS 810772 - 811218 292 ## COG3304 Predicted membrane protein - Prom 811259 - 811318 3.0 + Prom 811265 - 811324 4.6 726 408 Tu 1 . + CDS 811547 - 813580 1972 ## COG0210 Superfamily I DNA and RNA helicases + Term 813621 - 813664 4.0 - Term 813617 - 813646 2.1 727 409 Tu 1 . - CDS 813674 - 814132 380 ## COG1803 Methylglyoxal synthase - Prom 814160 - 814219 2.8 728 410 Tu 1 . - CDS 814237 - 814746 288 ## COG3110 Uncharacterized protein conserved in bacteria - Prom 814903 - 814962 3.2 + Prom 814659 - 814718 3.4 729 411 Tu 1 . + CDS 814938 - 815354 455 ## COG1832 Predicted CoA-binding protein + Term 815400 - 815439 2.8 - Term 815371 - 815411 6.5 730 412 Op 1 . - CDS 815424 - 815744 300 ## COG3785 Uncharacterized conserved protein - Prom 815814 - 815873 2.9 - Term 815837 - 815873 1.3 731 412 Op 2 . - CDS 815913 - 817106 592 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative - Prom 817145 - 817204 4.0 732 413 Tu 1 . + CDS 817216 - 817494 280 ## COG1254 Acylphosphatases + Term 817507 - 817550 -0.9 733 414 Tu 1 . - CDS 817495 - 817824 330 ## COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit - Prom 817852 - 817911 4.7 - Term 817909 - 817940 1.1 734 415 Tu 1 . - CDS 817988 - 818650 774 ## COG0670 Integral membrane protein, interacts with FtsH + TRNA 818921 - 819008 64.4 # Ser TGA 0 0 + Prom 819362 - 819421 5.1 735 416 Tu 1 . + CDS 819483 - 820133 367 ## COG3916 N-acyl-L-homoserine lactone synthetase 736 417 Tu 1 . - CDS 820114 - 820854 356 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 820940 - 820999 3.2 737 418 Op 1 6/0.177 + CDS 822072 - 822572 518 ## COG3516 Uncharacterized protein conserved in bacteria 738 418 Op 2 1/0.524 + CDS 822604 - 824151 1601 ## COG3517 Uncharacterized protein conserved in bacteria 739 418 Op 3 8/0.095 + CDS 824169 - 825518 1317 ## COG3522 Uncharacterized protein conserved in bacteria 740 418 Op 4 1/0.524 + CDS 825515 - 826174 455 ## COG3455 Uncharacterized protein conserved in bacteria 741 418 Op 5 1/0.524 + CDS 826187 - 827881 1178 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 742 418 Op 6 1/0.524 + CDS 827970 - 828461 531 ## COG3157 Hemolysin-coregulated protein (uncharacterized) + Term 828469 - 828502 5.2 + Prom 828545 - 828604 2.3 743 419 Op 1 3/0.367 + CDS 828669 - 831371 1301 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 744 419 Op 2 . + CDS 831365 - 833893 2050 ## COG3501 Uncharacterized protein conserved in bacteria 745 419 Op 3 . + CDS 833911 - 836160 1231 ## PXO_04701 DNA repair ATPase 746 419 Op 4 1/0.524 + CDS 836172 - 837143 397 ## COG1262 Uncharacterized conserved protein 747 419 Op 5 . + CDS 837166 - 838134 487 ## COG1262 Uncharacterized conserved protein + Prom 838545 - 838604 2.0 748 420 Tu 1 . + CDS 838641 - 838898 209 ## COG4104 Uncharacterized conserved protein + Prom 839381 - 839440 6.3 749 421 Op 1 . + CDS 839470 - 840102 248 ## gi|238751676|ref|ZP_04613165.1| hypothetical protein yrohd0001_18030 750 421 Op 2 5/0.265 + CDS 840113 - 843478 3152 ## COG3523 Uncharacterized protein conserved in bacteria 751 421 Op 3 . + CDS 843478 - 845076 1268 ## COG3515 Uncharacterized protein conserved in bacteria 752 421 Op 4 9/0.054 + CDS 845143 - 846906 1518 ## COG3519 Uncharacterized protein conserved in bacteria 753 421 Op 5 1/0.524 + CDS 846870 - 847955 523 ## COG3520 Uncharacterized protein conserved in bacteria 754 421 Op 6 1/0.524 + CDS 847936 - 848484 431 ## COG3521 Uncharacterized protein conserved in bacteria 755 421 Op 7 1/0.524 + CDS 848488 - 848925 500 ## COG3518 Uncharacterized protein conserved in bacteria 756 421 Op 8 . + CDS 848967 - 850331 1101 ## COG3515 Uncharacterized protein conserved in bacteria + Term 850339 - 850385 8.2 - Term 850321 - 850373 -0.9 757 422 Tu 1 . - CDS 850377 - 852764 1428 ## COG3264 Small-conductance mechanosensitive channel - Prom 852803 - 852862 3.5 758 423 Tu 1 . - CDS 852934 - 854310 870 ## COG1538 Outer membrane protein + Prom 854707 - 854766 2.4 759 424 Tu 1 . + CDS 854809 - 856290 998 ## COG0366 Glycosidases + Term 856336 - 856376 2.1 760 425 Op 1 5/0.265 - CDS 856297 - 857280 527 ## COG5430 Uncharacterized secreted protein 761 425 Op 2 10/0.041 - CDS 857282 - 859651 1269 ## COG3188 P pilus assembly protein, porin PapC 762 425 Op 3 5/0.265 - CDS 859711 - 860475 495 ## COG3121 P pilus assembly protein, chaperone PapD 763 425 Op 4 . - CDS 860491 - 861027 292 ## COG5430 Uncharacterized secreted protein 764 425 Op 5 . - CDS 861034 - 861603 281 ## EFER_1135 putative type I pilus protein CsuA/B - Prom 861802 - 861861 5.3 + Prom 861856 - 861915 5.8 765 426 Op 1 . + CDS 861972 - 862103 70 ## + Prom 862121 - 862180 4.5 766 426 Op 2 . + CDS 862206 - 862874 535 ## COG3703 Uncharacterized protein involved in cation transport + Term 863017 - 863084 13.3 + TRNA 862987 - 863062 95.7 # Lys CTT 0 0 767 427 Tu 1 . - CDS 863077 - 863784 223 ## COG0582 Integrase 768 428 Op 1 . - CDS 864467 - 864685 104 ## Ent638_1001 hypothetical protein 769 428 Op 2 . - CDS 864687 - 865253 135 ## COG4725 Transcriptional activator, adenine-specific DNA methyltransferase 770 428 Op 3 . - CDS 865250 - 865549 194 ## 771 428 Op 4 . - CDS 865554 - 865781 151 ## - Prom 866016 - 866075 1.9 - Term 866085 - 866127 -0.7 772 429 Op 1 . - CDS 866137 - 866466 211 ## 773 429 Op 2 . - CDS 866510 - 866785 167 ## 774 429 Op 3 . - CDS 866786 - 867697 449 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 775 429 Op 4 . - CDS 867699 - 868979 870 ## SeD_A0606 Eaa protein 776 429 Op 5 . - CDS 868972 - 869154 86 ## 777 429 Op 6 . - CDS 869147 - 869359 183 ## 778 429 Op 7 . - CDS 869349 - 869729 211 ## 779 430 Op 1 . - CDS 870144 - 870824 417 ## ECUMN_1387 exonuclease from phage origin 780 430 Op 2 . - CDS 870821 - 871735 391 ## COG3723 Recombinational DNA repair protein (RecE pathway) 781 430 Op 3 . - CDS 871732 - 872019 198 ## 782 431 Op 1 . - CDS 872138 - 872251 99 ## - Prom 872273 - 872332 2.2 - Term 872313 - 872339 -0.7 783 431 Op 2 . - CDS 872341 - 872685 251 ## - Term 872720 - 872767 -0.8 784 432 Op 1 . - CDS 872814 - 873191 272 ## ECL_01299 GP38 - Term 873205 - 873235 1.8 785 432 Op 2 . - CDS 873263 - 873493 189 ## ECDH10B_1326 regulatory protein N - Prom 873545 - 873604 2.4 + Prom 873636 - 873695 2.0 786 433 Tu 1 . + CDS 873726 - 874313 381 ## SSPA2255 superinfection exclusion + Term 874480 - 874513 -0.9 787 434 Tu 1 . - CDS 874457 - 874666 129 ## - TRNA 874689 - 874766 57.5 # Gly CCC 0 0 - Term 875040 - 875066 -0.7 788 435 Tu 1 . - CDS 875088 - 875780 274 ## COG2932 Predicted transcriptional regulator - Prom 875838 - 875897 3.4 + Prom 875722 - 875781 2.3 789 436 Tu 1 . + CDS 875802 - 876107 232 ## COG1396 Predicted transcriptional regulators 790 437 Op 1 . + CDS 876242 - 876520 236 ## ECO26_3371 putative phage regulatory protein CII 791 437 Op 2 . + CDS 876555 - 876716 147 ## 792 437 Op 3 . + CDS 876703 - 877554 191 ## SeSA_A0620 GP59 793 438 Op 1 . + CDS 877669 - 879549 671 ## SPC_1284 hypothetical protein 794 438 Op 2 . + CDS 879562 - 879936 343 ## + Term 880145 - 880185 -0.4 795 439 Op 1 . + CDS 880617 - 880859 120 ## PAU_03126 hypothetical protein 796 439 Op 2 . + CDS 880922 - 881155 216 ## Ctu_11230 hypothetical protein 797 440 Tu 1 . + CDS 881515 - 881883 82 ## E2348C_0681 hypothetical protein - Term 882498 - 882556 1.0 798 441 Tu 1 . - CDS 882698 - 882874 119 ## - Prom 883106 - 883165 3.9 799 442 Tu 1 . + CDS 882845 - 883615 157 ## Ctu_11610 antitermination protein Q homolog from lambdoid prophage Qin + Term 883727 - 883768 5.5 + Prom 884073 - 884132 2.6 800 443 Op 1 . + CDS 884237 - 884506 214 ## KPK_3374 hypothetical protein 801 443 Op 2 . + CDS 884478 - 884972 299 ## COG3772 Phage-related lysozyme (muraminidase) 802 443 Op 3 . + CDS 884969 - 885334 151 ## SPAB_02171 hypothetical protein 803 443 Op 4 . + CDS 885207 - 885545 147 ## KPK_4147 hypothetical protein + Term 885597 - 885648 -0.5 + Prom 885618 - 885677 4.4 804 444 Tu 1 . + CDS 885867 - 886412 357 ## NT01EI_2292 hypothetical protein 805 445 Op 1 . + CDS 886843 - 887037 254 ## gi|212711509|ref|ZP_03319637.1| hypothetical protein PROVALCAL_02582 806 445 Op 2 . + CDS 887040 - 887471 282 ## BAV1313 phage small subunit terminase 807 445 Op 3 . + CDS 887458 - 888927 402 ## COG5410 Uncharacterized protein conserved in bacteria 808 445 Op 4 . + CDS 888957 - 890312 570 ## SeSA_A0634 gp5 809 446 Op 1 . + CDS 891185 - 892453 781 ## ECL_01329 gp7 810 446 Op 2 . + CDS 892466 - 892924 454 ## SeSA_A0637 gp8 811 446 Op 3 . + CDS 892938 - 894014 820 ## ECL_01331 gp9 812 446 Op 4 . + CDS 894024 - 894317 292 ## ECL_01332 GP10 + Term 894342 - 894372 2.1 813 447 Op 1 . + CDS 894380 - 894775 254 ## ECL_01333 GP11 814 447 Op 2 . + CDS 894778 - 894948 152 ## ECL_03192 hypothetical protein 815 447 Op 3 . + CDS 894945 - 895289 305 ## Kvar_1804 hypothetical protein 816 447 Op 4 . + CDS 895291 - 895659 146 ## XBJ1_1221 putative GP14 817 447 Op 5 . + CDS 895731 - 896036 176 ## XBJ1_1222 hypothetical protein + Term 896058 - 896087 0.3 818 447 Op 6 . + CDS 896104 - 896856 575 ## COG5492 Bacterial surface proteins containing Ig-like domains 819 447 Op 7 . + CDS 896912 - 897613 204 ## ESA_03036 hypothetical protein + Term 897630 - 897659 1.2 820 448 Op 1 . + CDS 897670 - 899907 1217 ## COG5281 Phage-related minor tail protein 821 448 Op 2 . + CDS 899909 - 900406 201 ## ECL_03185 hypothetical protein 822 448 Op 3 . + CDS 900406 - 900876 224 ## ECL_01343 hypothetical protein 823 448 Op 4 . + CDS 900880 - 901311 111 ## ECL_03183 hypothetical protein 824 448 Op 5 . + CDS 901259 - 903724 971 ## ECL_01345 hypothetical protein + Term 903744 - 903773 0.4 825 449 Tu 1 . + CDS 903780 - 906197 118 ## ESA_03029 hypothetical protein + Term 906444 - 906493 -0.8 826 450 Tu 1 . - CDS 906237 - 906578 111 ## ETAE_1945 hypothetical protein - Prom 906813 - 906872 5.5 + Prom 907130 - 907189 12.6 827 451 Tu 1 . + CDS 907402 - 907521 60 ## + Term 907576 - 907615 2.8 - Term 907502 - 907542 1.3 828 452 Tu 1 . - CDS 907724 - 908647 56 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 908686 - 908745 2.9 + Prom 909144 - 909203 4.0 829 453 Tu 1 . + CDS 909229 - 909603 224 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) + Prom 909622 - 909681 4.5 830 454 Tu 1 . + CDS 909708 - 910235 258 ## COG3637 Opacity protein and related surface antigens + Term 910254 - 910279 -0.5 831 455 Tu 1 . - CDS 910770 - 911591 309 ## COG0859 ADP-heptose:LPS heptosyltransferase - Prom 911805 - 911864 6.4 - Term 912323 - 912360 5.5 832 456 Tu 1 . - CDS 912373 - 912597 233 ## Spro_1847 hypothetical protein + Prom 913095 - 913154 3.9 833 457 Op 1 3/0.367 + CDS 913206 - 913862 492 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 834 457 Op 2 9/0.054 + CDS 913855 - 915687 1132 ## COG0322 Nuclease subunit of the excinuclease complex 835 457 Op 3 . + CDS 915745 - 916293 239 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + TRNA 916452 - 916527 93.7 # Gly GCC 0 0 + TRNA 916580 - 916653 51.5 # Cys GCA 0 0 + TRNA 916664 - 916750 70.2 # Leu TAA 0 0 + Prom 917189 - 917248 6.3 836 458 Tu 1 . + CDS 917314 - 917679 60 ## STM0905 hypothetical protein + Prom 917748 - 917807 4.7 837 459 Tu 1 . + CDS 917828 - 918061 128 ## + Term 918073 - 918108 -0.9 + Prom 918241 - 918300 1.6 838 460 Tu 1 . + CDS 918389 - 918652 68 ## 839 461 Tu 1 . - CDS 918693 - 919403 262 ## sce1482 hypothetical protein - Prom 919428 - 919487 6.5 + Prom 920260 - 920319 4.9 840 462 Op 1 . + CDS 920405 - 920698 185 ## 841 462 Op 2 . + CDS 920703 - 921104 113 ## - Term 921269 - 921312 7.7 842 463 Tu 1 . - CDS 921321 - 922940 332 ## ECO103_3812 hypothetical protein - Prom 923129 - 923188 8.6 + Prom 923189 - 923248 4.6 843 464 Tu 1 . + CDS 923289 - 923732 346 ## + Term 923833 - 923864 1.8 844 465 Tu 1 . - CDS 924437 - 924970 393 ## COG3038 Cytochrome B561 - Prom 924993 - 925052 3.9 845 466 Tu 1 . - CDS 925240 - 925578 143 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 925768 - 925827 4.9 - Term 926257 - 926301 2.0 846 467 Tu 1 . - CDS 926370 - 926828 -68 ## Ctu_1p00120 hypothetical protein - Prom 926902 - 926961 5.2 + Prom 928059 - 928118 7.5 847 468 Tu 1 . + CDS 928278 - 929567 801 ## COG1114 Branched-chain amino acid permeases + Term 929573 - 929628 9.1 848 469 Tu 1 . - CDS 929636 - 930757 688 ## COG0477 Permeases of the major facilitator superfamily - Prom 930898 - 930957 8.1 + Prom 930922 - 930981 4.8 849 470 Op 1 . + CDS 931100 - 931669 535 ## COG1335 Amidases related to nicotinamidase 850 470 Op 2 . + CDS 931745 - 932449 563 ## COG5587 Uncharacterized conserved protein - Term 932521 - 932559 9.4 851 471 Tu 1 . - CDS 932585 - 934192 1075 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 934401 - 934460 5.5 - Term 934496 - 934548 14.5 852 472 Tu 1 . - CDS 934557 - 936329 1192 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 - Prom 936451 - 936510 5.9 + Prom 936624 - 936683 5.2 853 473 Tu 1 . + CDS 936704 - 937204 371 ## Spro_0994 hypothetical protein + Term 937226 - 937261 1.7 - Term 937088 - 937132 0.6 854 474 Op 1 . - CDS 937258 - 938163 469 ## COG0657 Esterase/lipase 855 474 Op 2 5/0.265 - CDS 938208 - 938480 247 ## COG2388 Predicted acetyltransferase 856 474 Op 3 . - CDS 938491 - 938721 219 ## COG3592 Uncharacterized conserved protein - Prom 938790 - 938849 4.4 - Term 938798 - 938833 -0.8 857 475 Tu 1 . - CDS 938864 - 939295 294 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 939315 - 939374 4.0 + Prom 939405 - 939464 4.3 858 476 Tu 1 . + CDS 939604 - 939762 61 ## + Term 940003 - 940039 -0.8 + Prom 940080 - 940139 8.7 859 477 Op 1 . + CDS 940360 - 940710 264 ## Spro_2989 transcriptional activator FlhD 860 477 Op 2 . + CDS 940713 - 941294 400 ## ETAE_1337 transcriptional activator + Term 941327 - 941386 0.2 861 478 Op 1 19/0.000 + CDS 941479 - 942372 752 ## COG1291 Flagellar motor component 862 478 Op 2 5/0.265 + CDS 942369 - 943358 666 ## COG1360 Flagellar motor protein 863 478 Op 3 20/0.000 + CDS 943368 - 945416 1939 ## COG0643 Chemotaxis protein histidine kinase and related kinases + Prom 945418 - 945477 2.0 864 478 Op 4 17/0.000 + CDS 945497 - 945991 583 ## COG0835 Chemotaxis signal transduction protein + Prom 946884 - 946943 1.8 865 478 Op 5 13/0.014 + CDS 947008 - 948675 1635 ## COG0840 Methyl-accepting chemotaxis protein + Term 948789 - 948823 -0.8 + Prom 948829 - 948888 4.1 866 479 Op 1 9/0.054 + CDS 948937 - 950568 1409 ## COG0840 Methyl-accepting chemotaxis protein + Term 950591 - 950628 8.2 867 479 Op 2 13/0.014 + CDS 950636 - 951511 461 ## COG1352 Methylase of chemotaxis methyl-accepting proteins 868 479 Op 3 . + CDS 951508 - 952338 650 ## COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 869 479 Op 4 18/0.000 + CDS 952356 - 952559 244 ## COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 870 479 Op 5 8/0.095 + CDS 952594 - 952983 468 ## COG0784 FOG: CheY-like receiver 871 479 Op 6 . + CDS 952993 - 953637 768 ## COG3143 Chemotaxis protein + Term 953646 - 953687 4.6 - Term 953633 - 953675 4.2 872 480 Tu 1 . - CDS 953745 - 954179 432 ## COG1959 Predicted transcriptional regulator - Prom 954289 - 954348 6.0 873 481 Tu 1 . + CDS 954178 - 954381 67 ## + Term 954564 - 954607 2.0 + Prom 954445 - 954504 1.7 874 482 Tu 1 . + CDS 954703 - 955491 772 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase + Term 955519 - 955555 5.1 + Prom 955560 - 955619 3.6 875 483 Tu 1 . + CDS 955647 - 956489 718 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 956515 - 956545 5.0 - Term 956503 - 956533 5.0 876 484 Tu 1 . - CDS 956554 - 957663 1037 ## COG0387 Ca2+/H+ antiporter - Prom 957746 - 957805 6.1 + Prom 957932 - 957991 2.8 877 485 Tu 1 . + CDS 958020 - 958595 542 ## COG0586 Uncharacterized membrane-associated protein + Term 958597 - 958632 2.1 878 486 Tu 1 . - CDS 958552 - 958953 176 ## ECUMN_3056 hypothetical protein - Prom 958993 - 959052 3.4 879 487 Tu 1 . - CDS 959054 - 959572 485 ## COG0586 Uncharacterized membrane-associated protein - Prom 959634 - 959693 1.9 880 488 Tu 1 . - CDS 959773 - 961239 1087 ## COG0477 Permeases of the major facilitator superfamily - Prom 961293 - 961352 5.7 + Prom 961264 - 961323 5.2 881 489 Tu 1 . + CDS 961363 - 961920 533 ## COG1309 Transcriptional regulator 882 490 Tu 1 . + CDS 962420 - 963433 851 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) 883 491 Op 1 . - CDS 963625 - 964260 414 ## COG1309 Transcriptional regulator 884 491 Op 2 . - CDS 964311 - 964706 83 ## + Prom 964335 - 964394 3.4 885 492 Op 1 . + CDS 964510 - 965223 675 ## Mpop_4203 hypothetical protein 886 492 Op 2 2/0.408 + CDS 965261 - 967033 1185 ## COG2303 Choline dehydrogenase and related flavoproteins 887 492 Op 3 . + CDS 967036 - 968349 811 ## COG2010 Cytochrome c, mono- and diheme variants + Term 968386 - 968427 6.3 + Prom 968487 - 968546 6.2 888 493 Tu 1 . + CDS 968600 - 970273 1448 ## COG0579 Predicted dehydrogenase - Term 970707 - 970736 1.2 889 494 Tu 1 . - CDS 970749 - 971849 807 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|316920349|gb|ADCU01000001.1| GENE 1 811 - 1575 481 254 aa, chain + ## HITS:1 COG:YPO1077 KEGG:ns NR:ns ## COG: YPO1077 COG3021 # Protein_GI_number: 16121378 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 253 8 260 260 404 76.0 1e-113 MRYVAGLPAERVFPGAMNELGQTLPVTQSLPTDNVLRIMVWNIFKQQRSDWLSVLKEYGK SSQLVLLQEAQTTPELVKFATSNYLTADQVPAFSFPQHPSGVMTLAAAHPVYCCPLREKE PLIRLSKSALVTVYPLFDGRLLMVVNIHAVNFSLGVDVYSKQLDPIGEQIALHKGPVIMA GDFNAWSKQRINALQRFASGMELQEVNFTNDHRRTAFGRPLDFVFYRGLGVVEASVLVTQ ASDHNPLLVDFKPD >gi|316920349|gb|ADCU01000001.1| GENE 2 1666 - 3069 755 467 aa, chain - ## HITS:1 COG:YPO1078 KEGG:ns NR:ns ## COG: YPO1078 COG0741 # Protein_GI_number: 16121379 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Yersinia pestis # 1 463 14 471 475 620 71.0 1e-177 MKAKAIIFASMLLVGCQGVNHHAKEPEQHAQSLSSVSRSEAGQPSKDARATSARWLNEST SNIAQEDLWGFISDDLKMKVPDNSRIREQKNKFLKNKSYLHDVTLRAEPYMYWIVEQIKQ RKMPMELVLLPIVESAFNPHATSSANAAGLWQIVPQTGRNYGLKQNQWYDGRRDVAASTT AALDMMQRMNRMFGGDWLLTVAAFNSGEGRVMQAVKANKRKGLPTDFWSLSLPRETSIYV PKMLALSDLIKNNKRYGIKLPKSNDQRALAKVDVGQQIQLTQAAEMAGMSLTKMKAFNPG YKKNVTAPNGPHYIMVPKAHVEQFKDSLAEGEIAAIQPNAQLASTNTSSKAQASSYKVRS GDTISTIAKRLNISQKQLLSMNNLRSNSKLKAGQTLQVANNASRSIADNSSITYKVRKGD SLASIAKRHGVNINDVMRWNSVITKASQIQPGDMLTLYVRDSANSNT >gi|316920349|gb|ADCU01000001.1| GENE 3 3140 - 3895 498 251 aa, chain - ## HITS:1 COG:YPO1079 KEGG:ns NR:ns ## COG: YPO1079 COG0491 # Protein_GI_number: 16121380 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Yersinia pestis # 1 251 1 251 251 342 62.0 3e-94 MNLISIPAMQDNYIWLLANEQRECLIVDPGVASPVLHYLTENKLTPKAILLTHHHNDHVG GVGEILQNYPDITVYGPQETVNHGCTQQVQGHDEITVLGLNFSVLDVPGHTLGHIAYYAM PYLFCGDTLFSAGCGRIFEGTPEQMYASLQLIAQLPDNTLICCAHEYTESNLRFARYVLP ENKEIETYQKQVKELRLKHQPSVPSLLKIEKEINPFLRCYDNDLQRNIGFENHPNETWQV FARLRDMKDSF >gi|316920349|gb|ADCU01000001.1| GENE 4 3942 - 4664 551 240 aa, chain + ## HITS:1 COG:YPO1080 KEGG:ns NR:ns ## COG: YPO1080 COG0500 # Protein_GI_number: 16121381 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Yersinia pestis # 1 238 1 238 239 334 63.0 1e-91 MKPAQITRTISSPLSWSEIPWGEYYRAALEQQLTPWWPKLFGYHLLKIGPLSSQISTEKC GISHQVSIGEKGDNMQVIADPYRLPFSAKSVDACLLSHTLSFASDPHRMLREVDRVLIDD GWLILTGFNPTSLVGLGKLVPGLRKRLPYSSRMFSMMRMLDWLQLLNYEVLYEHRCQILP WNRRGGLFIGKHLPVLGCLSIIVARKRTIPLTPTSLRERSQRASWRGTVGATKSFRKRSD >gi|316920349|gb|ADCU01000001.1| GENE 5 4684 - 5154 355 156 aa, chain - ## HITS:1 COG:YPO1081 KEGG:ns NR:ns ## COG: YPO1081 COG0328 # Protein_GI_number: 16121382 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Yersinia pestis # 1 154 1 154 154 276 85.0 9e-75 MLKQVEIFTDGSCLGNPGPGGYGAILRYKQHEKTLSAGYYLTTNNRMELMAAIVALETLK DPCSVILCSDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDLAIQSHKIEWVW IKGHAGHIENERCDELARAAAGSPDRDDTGYQPESK >gi|316920349|gb|ADCU01000001.1| GENE 6 5208 - 5942 669 244 aa, chain + ## HITS:1 COG:STM0264 KEGG:ns NR:ns ## COG: STM0264 COG0847 # Protein_GI_number: 16763647 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Salmonella typhimurium LT2 # 1 243 1 243 243 406 78.0 1e-113 MSTGITRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRNFHVYIKPDRLVDP EAYGVHGISDDFLLDKPTFADIADEFLEFIRGAELVIHNAPFDIGFMDYEFRKLNRDIPK TETFCKITDSLVMARRLFPGKRNSLDALCNRYEIDNTKRTLHGALLDSQILADVYLTMTG GQTSLTFSMESEGEKPRPTGEVQKIVRKMQALKVVRASAEELAEHEHRLDLVQKKGGSCL WRAE >gi|316920349|gb|ADCU01000001.1| GENE 7 6385 - 7299 499 304 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 2 279 1 276 305 196 39 2e-48 MMTLRQLRHFIAVAETGSISAAAQTVFVSQSSLTQAIQLLEQEIGAVLFKRHAKGMELTH QGHQFLRQSYLILATVENAKRSLELGCENLSGTLKIGVTSLVAGYFLVDMLTRFRAAYPN VTTQLVEDERPYIEHLLVNGEIDIGVLILSNLEDRDALQTEVLMHSPYRLWLPPLHPLLE NDSIRLADVVKEPLIQLNTDEMGSHLRRIWEKAKLTPTIAMRTGSTEAVRSLVAAGIGVA LLPDMAYRPWSLEGNMIEARTLVDTLEPLDIGLAWRRGSARPELVTPFLQIARENSAMRK LSPK >gi|316920349|gb|ADCU01000001.1| GENE 8 7467 - 8924 1195 485 aa, chain + ## HITS:1 COG:SMc01656 KEGG:ns NR:ns ## COG: SMc01656 COG1012 # Protein_GI_number: 15966021 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Sinorhizobium meliloti # 8 478 1 471 475 606 62.0 1e-173 MSSITDRLSTQQFIDGQLVTGEGPEEQLINPANGEALLLLAEASAQQVSDAVESAERAFL SWSRTLPARRASLLLAIADVIERNALQLAELESLNCGKPIHQALSDDIPAAIDTFRYFAG AVRCQHGQLGGEYLEGHTSMIRRDAIGVVASIAPWNYPLMMAAWKMAPALAAGNTVVFKP SEHTPLSTLTLIPLLKDIVPTGVINVVYGRGETVGNYLVNHQLVRMVSLTGDIVTGQKIM QAAVKNVKRTHLELGGKAPVIVCDDADLNEVVAGIRRYGFYNAGQDCTAACRVYADRKIY DALVESLGHAAGSLRYARHDDRENEMGPLISARQRDRVASFVERALSHPHIERITGAQMH SGPGFFYPPTLLAGCQQQDEIVQREVFGPVVSVTPVDSLEQALQWANESEYGLASSVWTK NIDRAWQLAAQLQYGTTWINTHFTLVSEMPHGGLKRSGYGKDLSSDALQDYSVVRHIMAK IKPQF >gi|316920349|gb|ADCU01000001.1| GENE 9 8993 - 10159 1093 388 aa, chain + ## HITS:1 COG:ydcS KEGG:ns NR:ns ## COG: ydcS COG0687 # Protein_GI_number: 16129399 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 388 1 381 381 593 74.0 1e-169 MKNTFIVTALSALCISGLGGIATAQAAGLPQKLGPAEGQLDIITWPGYIERGQSDKNYDW VTQFEKDTGCKVNIKTAATSDEMVSLMAKGGYDLVTASGDASLRLIYGKRVQPINPDLIP NWKNLDPRMVNGPWYTVKGEVYGTPYQWGPNLLMYNTKVFPKAPDTWGVIFEPQNLPDGK SNKGRVQAYDGPIYIADAALYLKSAKPELGIKDPYELNETQYQAVLDLLRTQHPLIHRYW HDASVQMSDFKNEGVAAGSSWPFQANGLKNEGQPINAVFPKEGATGWADTTMVHAQAKHL TCAYKWMNWQLTPKVQGDVAAWFGSLPAVPEGCKASTLLGANGCEANGYKFFDKIAFWKT PQAKCESQGQCVPYSRWTQDYIAIMGGR >gi|316920349|gb|ADCU01000001.1| GENE 10 10349 - 11374 1144 341 aa, chain + ## HITS:1 COG:ydcT KEGG:ns NR:ns ## COG: ydcT COG3842 # Protein_GI_number: 16129400 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli K12 # 1 341 1 337 337 429 65.0 1e-120 MSGSVELIDVSKLYGDVHAVDRVSLTIKEGEFFSLLGPSGSGKTTCLRLIAGFEQPTSGS IRIQGQEAAGLPPYQRDVNTVFQDYALFPHMTVLENIAYGLMVKGVAKAERTSRAREALS SVALAEYGERKPSQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQTELKKL QRQLGITFIFVTHDQSEALSMSDRVAVFSQGRIEQVDTPQKLYMQPETAFVAEFVGTSNV IRGPSAETLLGQSGIFSIRPEHIRFAREAAKPEEIHVQGILRDVHYQGAATRYEVMIDNG VRLFVSQGNTQEQLLQPVRNTGEPVRLCWERNAMVALAGDR >gi|316920349|gb|ADCU01000001.1| GENE 11 11376 - 12320 985 314 aa, chain + ## HITS:1 COG:ECs2046 KEGG:ns NR:ns ## COG: ECs2046 COG1176 # Protein_GI_number: 15831300 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Escherichia coli O157:H7 # 3 314 1 313 313 413 76.0 1e-115 MEMGMDYSEVRNRPARRFSTFLYRRPTLYLLLLLTPPLLWFGVIYLGSLFTLLWQGAYTF DDFTMTVTPDFTLDNIKALFNPSNYDIIVRTLTMAILVSLACALLAFPIAYYMARYTRGR SKAFFYIAIMMPMWASYIVKVYAWTLLLAKDGVAQWFLHYMGLEPVLAWVLGIPDIGGST LSTSGLGRFMVFVYIWLPFMILPIQAALERLPPTLLQASADLGAHPAQTFRHIVLPLAIP GIAAGSIFTFSLTLGDFIVPQLVGPPGYFIGSMVYAQQGAIGNMPMAAAFTLVPIVLIAI YLTIVKRLGAFDAL >gi|316920349|gb|ADCU01000001.1| GENE 12 12310 - 13122 730 270 aa, chain + ## HITS:1 COG:ydcV KEGG:ns NR:ns ## COG: ydcV COG1177 # Protein_GI_number: 16129402 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Escherichia coli K12 # 8 264 6 262 264 339 78.0 3e-93 MRSDLNAAPWGLKIAAWGGLVFLHFPILIIAAYAFNTEDSAFSFPPKGFTLHWFEVAAGR QDVWDALWLSVQIAAMATTIALILGTLAAAALYRREFFGKQTISFLILLPIALPGIVTGI ALLSAFKTLNMEPGVMTIVIGHATFCVVIVFNNVIARFRRTSHSLIEASMDLGADGWQTF RHVMLPSLASAMLAGGMLAFALSFDEIIVTTFTAGHERTLPLWLLNQLNRPRDVPVTNVV ALCVMCLTAIPILGAYYLTKGSEDVEGAGK >gi|316920349|gb|ADCU01000001.1| GENE 13 13273 - 14700 1457 475 aa, chain + ## HITS:1 COG:ydcW KEGG:ns NR:ns ## COG: ydcW COG1012 # Protein_GI_number: 16129403 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 474 1 474 474 714 74.0 0 MHTQLLINGRLVEGQGSALPVYNPATGEVIAHIAQASAAQVEEAVNAADKAFIEWGQTTP KDRAALLLQVADVIEEQGEVLARLESQNCGKPYQRVLEDEIPAIADVFRFFAGATRCLSG PVAGEYLPDHTSMIRRDPVGVIASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEQTPLT AFHLSQTLADLFPAGVVNVLFGLGKDVGDVLTGHPKVRMVSLTGSIGTGAHIIGHTASTI KRTHMELGGKAPVIVFDDADVEKVVEGIRIFGFYNAGQDCTAACRLYVQKSIYQRVVDAL AQTVSTLDMGNPGDESTELGPLITEQHLQRVEGFVERAKALPHITVATGGSRVNGPGFYF QPTVLAGAKQDDEIVQKEVFGPVITITPFDDEAQVLGWANDSNYGLASSVWTRDVGRAHR MSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSMFGLEDYTVVRHVMINHG >gi|316920349|gb|ADCU01000001.1| GENE 14 14929 - 15534 603 201 aa, chain + ## HITS:1 COG:PA5190 KEGG:ns NR:ns ## COG: PA5190 COG0778 # Protein_GI_number: 15600383 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Pseudomonas aeruginosa # 1 201 1 200 200 229 55.0 2e-60 MNAIEVIQQRRATKQFDASHVMTFDEKKELLNIALQNAPSAFNLQHWRPLLIEDRAQREK IREAAWGQAQVTDASMLVVLCGDLSSWETQVKNIWADAAEPVQQYMIPAVDSYYRGKPQT QRDEIMRSAGIFAQTLMLAAKAQGYDSCPMDGFDFDAVGKIINKPEQYEICLMIAIGKGT SQPYPRIGKLPFEHIVKSDRF >gi|316920349|gb|ADCU01000001.1| GENE 15 15755 - 16291 660 178 aa, chain + ## HITS:1 COG:YPO3408 KEGG:ns NR:ns ## COG: YPO3408 COG0634 # Protein_GI_number: 16123557 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Yersinia pestis # 1 178 1 178 178 311 89.0 4e-85 MKHTVEVMISEQEVHQRIAELGRQISEDYRDSGSEMVLVGLLRGSFMFMADLCRQIDVPH EVDFMTASSYGNGMNSTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVRELFALRGP KSLAICTLLDKPSRREVDVPVEYVGFAIPDEFVVGFGIDYAQRYRHLPYIGKVVMLDE >gi|316920349|gb|ADCU01000001.1| GENE 16 16359 - 16664 112 101 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLYRSSLFSVFAIAVTLSSYVKASDGVIHFMGAIVDDACNVTNTESSIQTRCYRNGKVI TQTAPINQTTSETALPRQIGWSKIETINDKRNLKVLTITYR >gi|316920349|gb|ADCU01000001.1| GENE 17 16677 - 16835 74 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCVLTIGPSIAWLVDVGIYSIMQSKKYQRSLLSYLSLNVIFLLRLGREIYQY >gi|316920349|gb|ADCU01000001.1| GENE 18 17094 - 17450 370 118 aa, chain + ## HITS:1 COG:no KEGG:ECA0688 NR:ns ## KEGG: ECA0688 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 1 113 15 129 138 72 36.0 4e-12 MELEWFTAKQLTEIAHLPTTPQGLHLHARKLAWIRRKRDGKTIEYHIDSFPNEVKQALRG RQVTESRYQRRSYDGELATKMWEEICVEMSLLLRQRLVELALREGVDALFFRLVSSLR >gi|316920349|gb|ADCU01000001.1| GENE 19 17544 - 18194 624 216 aa, chain - ## HITS:1 COG:yadF KEGG:ns NR:ns ## COG: yadF COG0288 # Protein_GI_number: 16128119 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Escherichia coli K12 # 1 212 1 212 220 366 80.0 1e-101 MKEIEKLIANNHAWSDTVSQEDPEFFGRLAKSQRPRFLWIGCSDSRVPAEQLTGLEAGEL FVHRNVANLVIHTDLNCLSVVQYAVDVLQVEHIIICGHLGCGGIEAAVENPELGLINNWL LHIRDLWYKHSSLLGELPPEKRLDTLCELNVVEQVYNLGHSTIMQSAWKRGQKVMIHGWV YGLQDGRLRDLDITTTSRETLELRYRNAMSTLLQQG >gi|316920349|gb|ADCU01000001.1| GENE 20 18337 - 19749 861 470 aa, chain - ## HITS:1 COG:YPO0894 KEGG:ns NR:ns ## COG: YPO0894 COG4452 # Protein_GI_number: 16121199 # Func_class: V Defense mechanisms # Function: Inner membrane protein involved in colicin E2 resistance # Organism: Yersinia pestis # 1 470 8 492 492 419 48.0 1e-117 MFKSVLLYKVLTVVGCMLLMFIPIKQLINIVHEREEYQEQVIDQVADSTSREQRVLGPVI VIPYALTSTEINNGERHSITKEYFSYELPQQLNIDGEPQVEIRKVGLYQTQIYHSDLRFS ANFKKVDTRQLVSGDNVKLSVGKPYLVVMLSDARGIRQISSLKANATEIAFEPGVQGDQQ GQGMHADIPLELLTDGALKIDFTFKMSGSRSLEVVPLGRTTEMTLRSNWPHPSFLGRFLP DTHSITAKGFSASWHSSWYANNLNHEYQVAGEQIPFNNIPAFRVGLVEPVDHYQLTERSI KYAILFIGLTFGAFFMFEMLTMLRLHPMQYILVGAALSMFYFILLAFAERIGFTLAYLIA SLSCSALIGFYLSAVLQGWIRGVLFSIGLLVLYGVLYMLLHSEDNSLMLGSVLLFSILAI IMSLTRRFDWHRVTSTSSPQKQSQEHETPSSDENGAQEENVSRKSFRLWK >gi|316920349|gb|ADCU01000001.1| GENE 21 19840 - 21276 995 478 aa, chain - ## HITS:1 COG:YPO0895 KEGG:ns NR:ns ## COG: YPO0895 COG0642 # Protein_GI_number: 16121200 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 1 477 1 472 472 567 62.0 1e-161 MRIGLQLLLGYFIIVAVAGFFVLDIFVQEVKPGVRRAVEGTLNDTASLLAQFAHNDLVNG TYHDGVLIDSSLQRAFQRVNSKPIGANIAGIRKNHNEYRVYLTDANGKVVFDSNGEALGQ DYSRWNDVWLTLRGSYGARSTLMDPNNPESSVMYVAAPIYDGDRIIGVLSVGKPNLALAP VIQRSEHRILVAGAALLGIALLVGLFFVWWINRSIGRLVKYATLVSEGHPVTLPKMNSTE LRRLAEALEHMRIRLEGKNYVEQYVHTLTHELKSPLAAIRGAAEILQEQPPVEVAQRFTL NIQQQSQRIQLLIDKMLTLAKIESRVDAELESLNIAPLLLQIMTAHEAQARQTQITLQFS QLENCTMHVDPWLLTQAIENLLANALDFTPPGGTITLIGKQNLDVYSVILIDDGAGIPDY ALPHIFDRFYSLPRTSGQKSSGLGLSFVLEVARLHQGEIILANRSPQGVEAQLLLPIK >gi|316920349|gb|ADCU01000001.1| GENE 22 21273 - 21974 394 233 aa, chain - ## HITS:1 COG:YPO0896 KEGG:ns NR:ns ## COG: YPO0896 COG0745 # Protein_GI_number: 16121201 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Yersinia pestis # 1 231 2 231 233 314 70.0 1e-85 MSPTIWLVEDESSIADTLIYTLESEGFTVCWFERGLPVLEMMTEKKPDLVILDVGLPDIN GFELCRKILTQSPDLPVLFLTARNDEVDRLIGLEIGADDYVAKPFSPREVCARVRTILRR SLKQNRLLNTPSSAVSIGPFMLDEACASISYHQQPLTLTRYEFLLLKTLLLAPGRVFSRE QLMDIVWTHAEESLERTVDTHIKTLRAKLRAVNSEGNAIQTHRGLGYSLGYAS >gi|316920349|gb|ADCU01000001.1| GENE 23 22220 - 23167 932 315 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 305 1 307 311 363 63 1e-98 MTYALELSQLTKTYAGGVQALRGIDLTVEAGDFYALLGPNGAGKSTTIGIISSLVNKSSG KVNVFGYDIDHDIVNAKRQLGLVPQEFNFNPFETVMQIVVHQAGYYGVTHSEALLRAEKY LKQLDLWGKRDERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLK ELNAQGTTIILTTHYLEEAEMLCRNIGIIQNGELVENTSMKELLSKLKSETFILDLAPKS PIPKLEGYKSQLRDTSTLEVEVLREQGLNGVFSQLSAQGVQVLSMRNKANRLEELFVTLV HDHDEKPQVNTEKKA >gi|316920349|gb|ADCU01000001.1| GENE 24 23164 - 23934 674 256 aa, chain + ## HITS:1 COG:STM0173 KEGG:ns NR:ns ## COG: STM0173 COG0842 # Protein_GI_number: 16763563 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 256 1 256 256 384 86.0 1e-106 MNALYWVALKSIWTKEVHRFARIWIQTLVPPVITMTLYFIIFGNLIGSRIGEMHGFDYMQ FIVPGLIMMSVITNSYANVASSFFSAKFQRNIEELLVAPVPTHVIIAGFVGGGVARGVCV GILVTLVSLFFVPFHVHNWAIVAATLLCTAILFSLGGLLNAVFAKTFDDISLVPTFVLTP LTYLGGVFYSLTLLPPFWQAVSKLNPIVYMISGFRFGFLGINDVPLVFTFVVLLAFIVVF YLLAWYLIERGRGLRT >gi|316920349|gb|ADCU01000001.1| GENE 25 24206 - 24652 400 148 aa, chain + ## HITS:1 COG:STM0178 KEGG:ns NR:ns ## COG: STM0178 COG2893 # Protein_GI_number: 16763568 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 138 1 137 146 129 47.0 2e-30 MLGIVLAGHTGFASGTLKSLKHLLGSVPEQCVSVEYTEWLSTNMLSRMMCDALHAADSGD GVVFITDILGAAPFRSAALMSHKHPKCEVVVGIGVGAMVQLFPQRGMLTAAEFRDSALEL TREQATSLWHEQNRHTVFGMVVEEPLER >gi|316920349|gb|ADCU01000001.1| GENE 26 25322 - 26656 730 444 aa, chain - ## HITS:1 COG:AGl619 KEGG:ns NR:ns ## COG: AGl619 COG5434 # Protein_GI_number: 15890426 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Endopolygalacturonase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 439 7 442 453 294 36.0 2e-79 MKLAISQFSPAADGITRDTQKFQHALDLISAHGGGTLYVDSGRYMLGGLLLGSNTCLHLE AGAELIVSDNYQDFAQARTHSSAECSDRAFLYALNAQNITICGSGKIFGSADAYFSATPN EQGYRIPLELRPRIIVFEGCQNVQLREFTIEHAPMWTIHLVSCNNVKISELTVQNDLTMA NTDALDIDSCQLVHITNSLFSAADDAICLKTTRKPAFLQQPAQQIVISNCTLQSKSCALK IGTETFADIEDVSVSNCTIYQSNRGIGIISRDGGHLRRMQFSHIMFTCQTAHPCHWGKAD PLFVSVRHRDPAITPGKIEWISFSHLSGISEGAINLHSTPAGMVSHIRIDHLQLEQRQTD SPEQGLYDVRPPCNPLRPTGMGLDNAYCLDPDTQRAFGVESYPHGMPVIYAVGVEDLTLE QLSVQRPDPLPEGWNSEHIELVEE >gi|316920349|gb|ADCU01000001.1| GENE 27 26974 - 27438 572 154 aa, chain + ## HITS:1 COG:YPO1186 KEGG:ns NR:ns ## COG: YPO1186 COG4807 # Protein_GI_number: 16121481 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 152 1 152 157 189 59.0 2e-48 MMNNDVLRSVRYMLNLNNEKMISILALADTKVTLEEMASFVTKEGEEGFKICPDVVMGYF LNGLIFFKRGKDEKYPAPKVERRITNNIILKKLRVAFELKSVDIIEILKSQDFAVTESEL SAIFRADGHKHYRECGDQLLRYFLKGLAARVRKG >gi|316920349|gb|ADCU01000001.1| GENE 28 27504 - 29183 939 559 aa, chain - ## HITS:1 COG:no KEGG:ECA3550 NR:ns ## KEGG: ECA3550 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 1 557 1 558 559 713 61.0 0 MWKIRALELNNQEMWNWQQATTIADYAHEQGFTTLVVGQAELLDKLVMPEGYTPHHFNDR LSSQQRARCIYLNRLAQYCQQLGLTFYLQAKEISFPVEILLCHPHLFDVRGNFHFDGAFW SQYLAAKLELVARQIPAMTGILLAISNTDSLLPISEPYGQAINAPHITTPPRRQEESLGL YHRLFSAAAEVMKQQDKHLVLRVFPASNSDVENVLSAIKPLSESVSVSIKLTPERFWPEF PNNPALLDVTERDVWVEIDLVGEEVGWGNFPFMRVEEIQGRLLWCQAKNPSISGALCKIS WEGMDNHWILGCISEINLFSCTHFLMPDTHANNEITLLARWLQQRYQWTPAMEVLEQLHN LLERAHQALSGAIYARRHVFHRHSLLPESYGQAMWSLYGQLNRNHWLPGSERDIQFIAEA KEMSANNLFLLAQEKDRSYQLAIELQREALTFSRRTDIPAKLKCRWEQEWQGFALYCRTF VHAQKAFFTLHYCKQVENTWSLREICQTNIQALYGTAYEMEDFCLQHRDFPVSMHVMFDA ERARALASSLTEELSQLMQ >gi|316920349|gb|ADCU01000001.1| GENE 29 29785 - 30558 767 257 aa, chain + ## HITS:1 COG:YPO0831 KEGG:ns NR:ns ## COG: YPO0831 COG1349 # Protein_GI_number: 16121139 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Yersinia pestis # 6 256 5 255 258 229 47.0 5e-60 MILDTVKRREQIIDLLCHEGSVRVEPLSMRFGVSSVTIRNDLRYLEQKGCALRSYGGAML NQQFAFDRPLQDKGRMNRDVKSRIAAKAAEFVKDGDTLILDSGSTTTQITPHLKTRRDLV VMTNALNIAYELAGFERIDVMVLGGSVRQNSYSLYGPAAEQQLRQYRFDTLFLGVDGFDL EAGITTPNTGEAHLNRVMCEVAHEIIAVVDSSKFGRKSFCMIREAGQIHRLITDSRIPDN YKRALTELGVDVIIADD >gi|316920349|gb|ADCU01000001.1| GENE 30 30638 - 31954 1037 438 aa, chain + ## HITS:1 COG:ECs4010 KEGG:ns NR:ns ## COG: ECs4010 COG4573 # Protein_GI_number: 15833264 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted tagatose 6-phosphate kinase # Organism: Escherichia coli O157:H7 # 1 423 1 424 426 457 54.0 1e-128 MQPLLQLIRRHKSGEAVGIYSVCSAHPWVLESALMLAKTRHSAVLIEATSNQVNQFGGYT GMTPAQFRDAVWAQADRIGLSRDRVWLGGDHLGPNAWQDRCADEAMQLAETLIHDYVSAG FRKIHLDCSMSCHGDPVPLSDTDVATRAARLCAVAEKAWQQAGGERPVYVIGTEVPVPGG AQEDMEGMQVTTPQAAATTLEIHQQAWRNAGLESVWERVIALVVQPGVEFDHHSVVHYQP EKARALSQFIESQSNMVYEAHSTDYQTPQAYCELVRDHFAILKVGPALTFALREALFALD RIDREWNGELKAAHLRDTLEQVMREQPQQWSRYYHGSAHQQYIDRQYSLSDRVRYYWPHP QVQQAVDLLINNLRHHPVPMALLSQYLPEQAQALNAGTLGTDPQQWVLDKIQRVLLSYAV ACEPDAEITPSQPQGALA >gi|316920349|gb|ADCU01000001.1| GENE 31 31951 - 33144 943 397 aa, chain + ## HITS:1 COG:agaS KEGG:ns NR:ns ## COG: agaS COG2222 # Protein_GI_number: 16131028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Escherichia coli K12 # 20 382 16 384 384 284 42.0 2e-76 MSELFSYSEAWLQDHHALHTAREIDQQPRLWQQLHDELTQAKAYWQPFLQPLLANPDLQI VLCGAGSSAFAGRAVAPWLREQCGLDVVAYGSTDIVPSPLQYLDPERPTLLVSYGRSGNS PESVAAVRLADQILPHCHHLMLTCNPDGALARYAEGRSNVCSLIMPQGSHDQSFAMTSSF SCMTLATILLLGPLTLEQSAPSLQQMAALCISEQQHWQQQVKVLAGSGFKRVMVLGSRCF TGIAEEAALKMLELTAGRIATRYDSSMGVRHGPKFMVDGDTLVLLMMSSEVYCHRYDADL LRELRHDNLAKKIVALSGTPGISDTVFNSDLDDIWLLFPYLMYLQMLAFETSLALGMTPD NPCPTGEVNRVVKGVEIYPFTAVHSIAANSLKNHSAK >gi|316920349|gb|ADCU01000001.1| GENE 32 33162 - 33644 508 160 aa, chain + ## HITS:1 COG:ECs4011 KEGG:ns NR:ns ## COG: ECs4011 COG3444 # Protein_GI_number: 15833265 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 2 159 12 169 169 201 61.0 4e-52 MSTPNILMTRIDNRLVHGQVGVTWTSSLGANLVLVANDDAAADPVQQNLMDMVVADGVQT RYFTLEKTIEVIHKAADRQKIFIVCKTPQDVLTLVKGGVPISFVNVGNMHFAEGKRQIHK TVSVNDSDTAAFRELEKLGVTCEVRRVPDESGESIAKLLA >gi|316920349|gb|ADCU01000001.1| GENE 33 33657 - 34448 929 263 aa, chain + ## HITS:1 COG:ECs4012 KEGG:ns NR:ns ## COG: ECs4012 COG3715 # Protein_GI_number: 15833266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 5 263 8 259 259 255 56.0 5e-68 MFTDALLIGLLAGLAGVDLFDGLTHFHRPVVIGPLVGLILGDVQTGLLVGGSLELVWMGM VPLAGAQPPNVVIGGVVGTAFAILTHADPKVAIGVAVPFAIAVQGCITLLFTAFSPMMHK CDKMVQALNWRGIERVNYLGITILFCFYFIVAFLPVYFGADAASVMVQKAPIWLLDGLAV AGGMMPAIGFSLLMKIMMKKTYVAYFILGFISVTFLNMPIIAVALGAFAIALIDFFNRSR NEQEGDSNAPASSANVQEMEDGI >gi|316920349|gb|ADCU01000001.1| GENE 34 34438 - 35331 786 297 aa, chain + ## HITS:1 COG:ECs4013 KEGG:ns NR:ns ## COG: ECs4013 COG3716 # Protein_GI_number: 15833267 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 27 297 22 292 292 354 63.0 1e-97 MGFNDNEAAMAAKAEQRMAQALATSQVEQDDYIDSTPAEALTKQDLNRMAWRSLLLQASF NYERMQAGGWLYTLIPGLRKIHKNPQDLANSMKMHMEFINVHPFDVTFLSGLVLAMEGSK EKVSTIRAVKVALMGPLGGIGDALFWLTLLPICAGIGASLALQGSLFGPIVFLLMFNIVH FGLRFGLAHYGYHAGTSALALLKTHTKKISHAASIVGMTVIGALVASYVHLSTPLVMHAG KASVALQKDVLDKLMPNLLPLCFTLLVFWLMKRGFSPVKLIGLTVLFGVVGKFVGFL >gi|316920349|gb|ADCU01000001.1| GENE 35 35341 - 35784 346 147 aa, chain + ## HITS:1 COG:ECs4014 KEGG:ns NR:ns ## COG: ECs4014 COG2893 # Protein_GI_number: 15833268 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 137 1 137 144 140 53.0 7e-34 MLGLVITGHGRFASGLLQGVEQVVGEQSQCCAVDFPEGVSTSELMILLEQACAACDSGEG VVILSDLLGGSPFRQAAVIAKQHPDYQVITGTNMQLAAEMMLEREGMNSQDFRDMALECG RRGVTSLWHEEQKCNQQQNNSVSLDGI >gi|316920349|gb|ADCU01000001.1| GENE 36 35797 - 36651 879 284 aa, chain + ## HITS:1 COG:STM3253 KEGG:ns NR:ns ## COG: STM3253 COG0191 # Protein_GI_number: 16766551 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Salmonella typhimurium LT2 # 1 284 1 284 284 395 66.0 1e-110 MYLISNREMLKKAQREGYAVPAFNVHNLETVQVVVETAAALKSPVILAGTPGTFTYAGTD YLVSICQEAAHLHDLPLALHLDHHEDLEDIRTKVMAGVRSVMIDGSHYAFEENIRTVAEV VRLCQRYDVSVEAELGRLGGQEDDLNVDSADSFFTDPASAREFVERTGIDSLAVAIGSAH GLYHGEPHLDFARLAEVRNVVDVPLVLHGASGIPEHMVREAIGLGICKVNVATDLKIAFA DAVKSYFTEHPDANDPRKYITPGKQAMHDVVVEKIRICGSEGKL >gi|316920349|gb|ADCU01000001.1| GENE 37 37623 - 39533 1672 636 aa, chain + ## HITS:1 COG:no KEGG:ESA_01921 NR:ns ## KEGG: ESA_01921 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: Arginine and proline metabolism [PATH:esa00330]; beta-Alanine metabolism [PATH:esa00410] # 1 634 1 630 632 1088 81.0 0 MSITRRDFLNGMAITIAAGLTPWQALRASPQALTQSLYYPPTLTGLRGNHPGSFEAAHLL GREGKHFDPKSVPVEEQFDLVVVGAGISGLAAACFWQQLQGKNQRILLLDNHDDFGGHAK RNEFNVEGKTILGYGGSESFQSPRTNFSPVAMGLLKTLNVDIEQMAKDFDQNFYPDLKLS RGVYFDRKNFGVDKIVNGDPGRAVADDIAPDRLNGRDITAFINDFPLSESDRNALIALHT EQKDYLPELNTDEKVAWLDSHSYSQFLREKVGLSEIAIRYFQQRTNDFQAVGIDATSCSD ARICALPGLDGMNLPPLDAESLADLDEPYIFHFPDGNAGLARLMVRHLIPAVAPGDSMES IVLAKFDYSQLDKKDSPVRLRLNSTGVHVANVSEQGKQAVDVTYLTGDKLHRVRAGQVVM AGYNMMIPYLVPEMPEKQAAALKENVKSPLVYSKVVIRNWQPFMKLGVHEIYSPAAPYSR VKLDYPVNMGGYEHPRDPNQPIGLHMVYVPTLPGSGLSPREQSRKGRALLLGTPFEVHEK MIREQLQGMFGAAGFDHQRDIQAITVNRWSHGYSYFLNGLFDDEKEAEQIIHTARQPIGR ITIANSDSDWSPYANSAVDQAWRAVNELTAMNKENV >gi|316920349|gb|ADCU01000001.1| GENE 38 39530 - 40714 1035 394 aa, chain + ## HITS:1 COG:PA4571_1 KEGG:ns NR:ns ## COG: PA4571_1 COG2010 # Protein_GI_number: 15599767 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Pseudomonas aeruginosa # 13 393 27 416 441 349 47.0 5e-96 MKPLMMLTLLATSVGANAMSAGEYVAKAGDCAACHTSPQGQALAGGMRFATPLGNIYATN ITPDKTHGIGSYSFEDFDKAMRQGIAKDGHHLYPAMPYTSYAKMTPEDMRALYDYLMTEV KPQSVENQKSDIPWPLSMRWPLGIWNSLFLQEGVYQPQSEKGDEWNRGAYLVQGAGHCGA CHTPRGWAMQEQGMDQAELRFLNGAELDGWYAPSLRGLNVSKDDLVALLKSGRSRHAALS GPMGEVVTHSSQYLTDSDLNGIATYLLSLEALPNDAKVKAPTAASMQSGAQTYARYCSTC HNTKGEGVDYTIPRLAGNLTVNADNPQTLIRVVLDGAQTPVTQQHMSYGMPGYGWALDDR QAADLMSYLRGSWGNKAEPVTAEQVGKVRKELDK >gi|316920349|gb|ADCU01000001.1| GENE 39 40836 - 42731 939 631 aa, chain - ## HITS:1 COG:no KEGG:XBJ1_0477 NR:ns ## KEGG: XBJ1_0477 # Name: not_defined # Def: hypothetical protein; putative exported protein # Organism: X.bovienii # Pathway: not_defined # 35 377 23 353 474 94 27.0 9e-18 MDKKKLLKGCGILILLACGILLISKITHKENIPTGYYFFSEIHIITAKNQDEKLTAHNGR PLSPEKFAEWIEDKVREENNDFYLHYTEGSLYLYDWLGEKSKIETTTDTLVLNNNTYHFS VSHDGKLTLTRGDMCFLIDCKGVLTLDFSRNKNEKITAIEEQQKKSLVELKANYQHDKQQ IAQNKFISDFIGQKIVQKPMSIKLPIDYILDEGDAYFLKNLLDENTINKYKNVTSTWIVH GNRYDIRVAYIKAEDNPFDINKIVKSDAIMPESVVYQEKQGAIYYDQNNNLTAVYTTYDK KEKEYCVAFAEGMKKATLDEIAKKYAIIKTLSAEDMGELLTPETASMAPKQFEDKFGKLF DSEALAKTLREELKNKLIIENLIQKQSSGIDGTHSFKFMPEFKDMITVHSGNISDLKREI ENYYKLDDEKLSWRVGYQDEHVLIMEHSAQELNYISYYFIEDKGLIYQIAYNPFDNSHEN EGTLADHLRVINSLRQLPEIKENHYSTKFITQHVGKYSNAQKLDEHDGLPIGLTQYLVAL NVNNQDRWGALDSAGNMIINIKYTIEVSDWGYLVSNLDKCTAFKSGAVFCAKGLIDYKGH VLVPAKYKYIEQTDDALVLISSDGKKTLFKH >gi|316920349|gb|ADCU01000001.1| GENE 40 42989 - 43537 255 182 aa, chain + ## HITS:1 COG:STM0098 KEGG:ns NR:ns ## COG: STM0098 COG1434 # Protein_GI_number: 16763488 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 179 17 195 206 201 55.0 8e-52 MFTTLLVNMLSIYTFSQEQDVRNADCAIVLGAGVKNGEPSPVFQERLNHSVYLYQKGYVG IIILTGGYSIGSHVSDAKIAKRYLLAKGIPEMNIFLEEQSTVTRENLSYAKDVMNLHQLH NALIISDPLHMKRAILIAKDNGIKAWSSPTPTSLYKSQYARFSFLVRESIYYSGYLTLRL FH >gi|316920349|gb|ADCU01000001.1| GENE 41 43557 - 44816 855 419 aa, chain - ## HITS:1 COG:ECs3416 KEGG:ns NR:ns ## COG: ECs3416 COG1940 # Protein_GI_number: 15832670 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Escherichia coli O157:H7 # 6 419 7 399 399 506 59.0 1e-143 MFDLGLNNQRVRHLNKRILLALIYRYKHASKSMLAQQTGLSIPAIGKILEELMDDGKIEH SDRMLSSRGLSGGCYQIPINNSLILCMNVTPNCIESQLVNSQILPLGEYQFAAVSAPHPQ ALLAAIEQVYYQQRKLHPQRTIQLALAIHGQVDPVTGVSQNMPQAPWKEHIEMKYLLEEK LKTRVLLDNDCVMLALAEKWQNADNPQDFCVINVDYGIGSSFVINQQIYRGSLYGSGQIG HTIVNPDGVACDCGRYGCLETVASLSELKKRARIWLKSQPQNNTHQSNTHQSNIHQSNTQ QNNIQTDWDSLSSKHLIERYQQGDLQVQAWVDNAASAIGLSLYNFLNILNINRIYFYGRS CAFGDRWLNAIMRQTGFNPFDPADPNMTNATRIGFGQLSRPQQIMGIGYLYAEKALENV >gi|316920349|gb|ADCU01000001.1| GENE 42 44933 - 48202 2867 1089 aa, chain + ## HITS:1 COG:no KEGG:KP1_4125 NR:ns ## KEGG: KP1_4125 # Name: yphG # Def: putative transferase # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 1088 7 1097 1097 1447 63.0 0 MYGDVKVWQESVTLPTYRIGAEDPNPMFLEKRVYQGSSGAVYPYGVIDTLTGECEDREYQ AVWLENDFIRVMLLPELGGRIHRAYDKVMQRDFVYYNEVIKPALVGLVGPWISGGIEFNW PQHHRPTTFMPVDVTFSHQDDGSKTVWLGEVEPMRGLQVMTGFRLYPQKALIEITGKVFN GNPTPRHFLWWANPAVKGGDDHQSVFPPDVTAVYDHGKRDVSAFPMATGTYYKVDYSAGV DISRYKNIPVPTSYMADKSDYDFVGAYHHGEQGGLLHIADHHVSPGKKQWTWGNCDFGLA WDRNLTDHNGPYIELMTGVFTDNQPDFTWLAPYEEKVFVQNFLPYSRLGTLQNANTQAAI KLERHHGEIQLGLYAIAPLDNVTLVVSADDKEIFRESLTFSPAQSWLHALPDRSSARLTL SLRDSDGREIISYLEHVPEEMPLPQAASAPQKPQELTNTDELYFIGQHLEQYLHASRSAF DYYQRALEIDPQDYRCNVALATLEFNRANFERAEFYADAALQRAQRWNKNPQCGQASMLR GSAREKLGRETQAYDDYFKATWSGNCRDAAFYALSRLALRKGESEQALAFVNQSLIFNGA NNLAMGLKALILQRLGQNEQAKEYVAAQLVQYPLSYALLYMQSLLNNNVDAFKTIAGARG INSCVLAGWLMSLGCENDALALLDLLDNPESLPLLYRAALTQDTQDRSQYLQQARDNFGL KVRFPNTLDEVAILQRLPQDGFAQYLLGCFFYSKRRYDQAESCWLFALQQMPNFAALHRV LGIYAFNKQDDAEGATRYFQRALDLEPENPRLLFEFSYLQKRMAVPTEQRLRLLDERRDV ALKRDDLTAELLSLYHIHNKTDAAAEILWRRQFHPWEGGEGKVTGQFLINHQRRALALMK ERHFAEAYDVLHQSLSYPANLGEGRLVGQSDNDIWYLLAVCAEQMQDTEHMQLALQRALQ GGAVLSEGRYYNDQPVDYLFYQAMAAVRLGEKAQAQQQFQFMVDWANQHRNDASEPDFFA VSLPDLIVLDASAQEQHIQHCLWVEALGYLGLGDEASFVRLTDRLLEHNPAHDKAHLLRL ALQTGVFNG >gi|316920349|gb|ADCU01000001.1| GENE 43 48283 - 49713 1234 476 aa, chain + ## HITS:1 COG:ECs5014 KEGG:ns NR:ns ## COG: ECs5014 COG0477 # Protein_GI_number: 15834268 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 3 471 2 487 491 310 39.0 4e-84 MKNTQNHLNMSYVWMICLVAACGGLLFGYDWVVIGGAKPFYEAYFGITDPAQSGWAMSSA LAGCVFGALISGWCADRFGRKLPLIISAVLFSASAWGTAVATDFDWFVFYRIVGGVGIGL ASALSPMYIAEVSPAEKRGKFVAINQLTIVIGVLAAQLVNLMIAEPVASSATMQDILQSW NGQAGWRWMFGAELVPAILFLLLMFLVPESPRWLAKAGKQDKAERMLRRIGSVEYARATL TDIRATLGANTQKVAASELLNPRVRPIILIGIVLAVFQQWCGINVIFNYAQEIFASAGFD INSTLKSIVATGLINLIFTIIALPLVDKLGRRKLMLLGASGLTVIYVLIAGAYALGIMGL PVLLLVLAAIAIYALTLAPVTWVLLSEIFPNRVRGMAMSVGTLALWVACFLLTYTFPLLN ASLGAAGSFLLYGIICALGFVFVLRNVPETKGVTLEALERQLAGSTKPAEHNVKQA >gi|316920349|gb|ADCU01000001.1| GENE 44 49713 - 50561 372 282 aa, chain + ## HITS:1 COG:ECs3410 KEGG:ns NR:ns ## COG: ECs3410 COG2017 # Protein_GI_number: 15832664 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli O157:H7 # 1 282 1 287 290 132 32.0 5e-31 MDIYTLETSRFRLRVTPQSAAILSFDDLDGGREILRAYQENTGWHPGESALFPMLPVANR VRDNRFRLGEREVCLPDSSLDPMFFLHGDGWLQRWQLQDLSVNHIALGLRVQHDCGFDYS ALLVYRLSNEGLTAHLTLRHCGTEPMLYGLGFHPFFAKTSQTQIQFFSSGYWPEGEKHLP LSWQRNMPDDIDFSCAKVPNNVWMNHGYSGWNGVAHLVTPHQPTVTIRSSVPYLMLFQMP NEPFICLEPQSHPVDAHNMEGQPGLVLLGKGENMELVMGIEV >gi|316920349|gb|ADCU01000001.1| GENE 45 51242 - 52432 1130 396 aa, chain - ## HITS:1 COG:YPO2908_2 KEGG:ns NR:ns ## COG: YPO2908_2 COG1018 # Protein_GI_number: 16123099 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Yersinia pestis # 150 396 1 247 247 298 57.0 2e-80 MLDSQTIATVKSTIPLLAATGPKLTAHFYDRMFEHNPELKEIFNMSNQRNGDQREALFNA ICAYATNIENLAALLPAVERIAQKHASFNIQPEQYQIVGHHLLKTLEEMFNPGDEVLDAW GKAYGVLADVFIQRESQIYQQSESTQGGWRDLRPFKILKKEKQSDLITSFILVPEDGSRV ADFQPGQYLAVYIRHPSLPHQEIRQYSLTNEPNGEYYRIAVKREGQGQVSNFMHDIAQEG DVIQIAPPHGDFFLEVKENTPVALISGGVGQTPMLGMLRTLQARGHQGEIQWLHAAENSK VRAFADEVNTIIAAMPNAQSHVWLQQTSADDCIDVDFNYQGLMDITPVADALKNNEMHYY FCGPVGFMQHVAKQLQALGVDAHRMHYECFGPHKVV >gi|316920349|gb|ADCU01000001.1| GENE 46 52803 - 54056 1456 417 aa, chain + ## HITS:1 COG:YPO2907 KEGG:ns NR:ns ## COG: YPO2907 COG0112 # Protein_GI_number: 16123098 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Yersinia pestis # 1 417 1 417 417 787 92.0 0 MLKREMNIADYDAELWQAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMN LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGHIDYDDLATQAEKHQPKMIIGGFSAYSGV VDWAKMREIADRIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL AKGGSEEMYKKLNSAVFPGAQGGPLMHVIAGKAVALKEAMEPEFKAYQQLVAKNAKAMVE VFLKRGYKVVSGGTENHLFLLDLVDKNITGKDADAALGRANITVNKNSVPNDPKSPFVTS GVRVGTPAITRRGFKEAEARELAGWMCDVLDNINDEATIERTKQKVLDICARLPVYA >gi|316920349|gb|ADCU01000001.1| GENE 47 54118 - 55128 613 336 aa, chain - ## HITS:1 COG:YPO2903 KEGG:ns NR:ns ## COG: YPO2903 COG3711 # Protein_GI_number: 16123094 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Yersinia pestis # 1 336 1 366 453 193 34.0 5e-49 MSLDTPLVPELSAQQRHCNLVLLLFTPTTPLHLTTIGRINRVLPEQAEQDIHSIGQEIMR FHALRVVYHPKQGYRLQGSAYDQRLCMLHWLRRAQRLLPNSIETIFIPRINEKSPAPPSA HFLQQIDDILEQAESTLHRTFGEQPRELIQYFLRYCRYQRQTLSLPSFPQHLKYWLREKE EYRIAERLCQATHGSLPMGIHELESEFTTLFLTLIKTYRYLPEMHSEDRHLMDETELAIQ QIEKLTQITFNHREQLCTQLFAHMGPAIERCLFGIKIGNTLLEEIETRYPGLMSMTQKAV QRIEQNYQIHFPPEELCLIAVSFGAWLMQEGVLAER >gi|316920349|gb|ADCU01000001.1| GENE 48 55308 - 55973 359 221 aa, chain + ## HITS:1 COG:YPO2902 KEGG:ns NR:ns ## COG: YPO2902 COG3683 # Protein_GI_number: 16123093 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Yersinia pestis # 11 221 13 224 224 254 56.0 1e-67 MLHFDIKNQRIYRWISILFITFGLFGTQSAMAHPHSFIEMKNSLVITDNQLTGMKMTWTM DPLTSADLLYDAGNAANGSEIWKQLAAEVMANVIGQHYFTELYHEGKKVKFLNRPSEYHL SREGNHAILSFEMLLAKPQPLNAEFTLMTYDPTYYVDMTYADDKSVTLPIDVQARCTLNV ITPKPDTSLKAYALNLDKADAPDEDMELGKQFAQRVEIKCH >gi|316920349|gb|ADCU01000001.1| GENE 49 55964 - 56974 601 336 aa, chain + ## HITS:1 COG:YPO2901 KEGG:ns NR:ns ## COG: YPO2901 COG2215 # Protein_GI_number: 16123092 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Yersinia pestis # 29 336 32 340 340 286 52.0 4e-77 MSLIFSSTKKSSTCGRYIPIAIITALAMSALVYAFVHWNDWLLVSIEWQKSLHQSMSYLL QRVADNARQAGLTLVALSFAYGVLHALGPGHGKVVITTYLATHPSRLRSSVRLTLAASLL QGLVAIALVSGVLGVLQLSTRDLHLSSFWLEKASYALVIFLGTVLCWRALNKIRMIRRSS LKSGLQISVIKPLEHHHQHSANCGCGHKHVANDREIATATTWRTQLAVVAAMGMRPCSGA ILVLLFSKVIGVYLWGVLAAMAMAAGTALTISGIAFLVHIARKIVERWAIQRGRNFSPYW RLALMLAGGVLLILIGLLMYQSAALTGMGSGRVFGR >gi|316920349|gb|ADCU01000001.1| GENE 50 57040 - 57843 975 267 aa, chain - ## HITS:1 COG:YPO2899 KEGG:ns NR:ns ## COG: YPO2899 COG0483 # Protein_GI_number: 16123090 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Yersinia pestis # 1 267 1 267 267 486 87.0 1e-137 MHPMLNIAIRAARKAGNLIAKNYETPDAVETTQKGSNDFVTNVDRDAEHLIIETIRKSYP KHTIISEERGELVGEDHDIQWVVDPLDGTANFIKRLPHFAVSIAVRIKGRTEVAVVYDPM RNELFTATRGQGAQLNGYRLRGAAAKDLDGTILATGFPFKVKQHAPAYIAILGKLFTQCA DFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAGGELLVREAGGLVTDFVGGHNYLSSG NIIAGNPRVVKAILANVRDELSEALKR >gi|316920349|gb|ADCU01000001.1| GENE 51 58076 - 58807 507 243 aa, chain + ## HITS:1 COG:YPO2898 KEGG:ns NR:ns ## COG: YPO2898 COG0565 # Protein_GI_number: 16123089 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Yersinia pestis # 1 239 1 241 257 402 85.0 1e-112 MLDNIRIVLVETSHTGNMGSTARAMKTMGLTNLYLVNPLVKPDSQAIALSAGASDVIGNA TIVDTFDEAIAGCSLVVGTSARSRSLPWPMLEPRECGQRSAMESEHAPVAIVFGRERVGL TNEELQKCHYHVAIPANPEYSSLNLAMAVQIISYEIRVAHLDRIAAHEPVPEEEPYPLVD DLERFYAHLEETLHATGFIRPTHPGNIMSRLRRLFTRARPEAQELNILRGILASIEKQEH GKH >gi|316920349|gb|ADCU01000001.1| GENE 52 59040 - 59537 521 165 aa, chain + ## HITS:1 COG:YPO2897 KEGG:ns NR:ns ## COG: YPO2897 COG1959 # Protein_GI_number: 16123088 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Yersinia pestis # 1 165 1 164 164 276 90.0 8e-75 MRLTSKGRYAVTAMLDVALHSQEGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRG PGGGYLLGKDAAEIAVGTVITAVDESVDATRCQGKEGCQGGTRCLTHTLWRDLSERISGF LNNITLAELVNNQEVLDVADRQNSDTRRGANTNGRQDTINVNLRA >gi|316920349|gb|ADCU01000001.1| GENE 53 59608 - 60822 1231 404 aa, chain + ## HITS:1 COG:ECs3396 KEGG:ns NR:ns ## COG: ECs3396 COG1104 # Protein_GI_number: 15832650 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Escherichia coli O157:H7 # 1 404 9 412 412 774 92.0 0 MKLPIYLDYSATTPADPRVAEKMMQFLTLDGTFGNPASRSHRFGWQAEEAVDIARNNIAE LVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFE VTYLAPQRNGIIDLKELEAAMREDTIVVSIMHVNNEIGVIQDIEAIGELCRSRGIIFHVD ATQSVGKLPIDLSKLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMR SGTLPVHQIVGMGEAYRIAKEEMATEVPRLRALRDRLWDGLKDLEEVYLNGSLEHGAPNI LNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGMNDELAHSSIRFSLGRF TTEEEIDYAIALVRKSIGRLRDLSPLWDMFKQGVDISTIEWAAH >gi|316920349|gb|ADCU01000001.1| GENE 54 60853 - 61239 475 128 aa, chain + ## HITS:1 COG:YPO2895 KEGG:ns NR:ns ## COG: YPO2895 COG0822 # Protein_GI_number: 16123086 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Yersinia pestis # 1 128 1 128 128 227 91.0 4e-60 MAYSDKVIDHYENPRNVGSFDNEDPTIGSGMVGAPACGDVMKLQIKVNNEGIIEDARFKT YGCGSAIASSSLVTEWVKGKSLDQAQAIKNTDIAEELALPPVKIHCSILAEDAIKAAIAD YKTKHSAK >gi|316920349|gb|ADCU01000001.1| GENE 55 61340 - 61663 382 107 aa, chain + ## HITS:1 COG:YPO2894 KEGG:ns NR:ns ## COG: YPO2894 COG0316 # Protein_GI_number: 16123085 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 107 1 107 107 177 83.0 6e-45 MSISMSDAAAQRVQTFLANRGKGYGLRLGVRTSGCSGMAYVLEFVDAPNEDDVVFEDKGV RVIVDGKSLAYLDGTELDFVKEGLNEGFKFNNPNMTSECGCGESFNV >gi|316920349|gb|ADCU01000001.1| GENE 56 61812 - 62330 486 172 aa, chain + ## HITS:1 COG:YPO2893 KEGG:ns NR:ns ## COG: YPO2893 COG1076 # Protein_GI_number: 16123084 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Yersinia pestis # 1 170 1 170 174 216 76.0 2e-56 MDYFTLFGLPVRYPVDGSLLASRYQELQRQFHPDRYASKPERERMQAIQQAATINDAYQT LKHPLKRAEYMLSLQGFDLSNEQHTMRDTSFLMEQLELREELDGIAHKADPEEALIAFSA RIAKMTKTRSAQMLTELDQQQWESAADTVRKLRFLDKLQQQVEQLEEKLLGL >gi|316920349|gb|ADCU01000001.1| GENE 57 62411 - 64261 1880 616 aa, chain + ## HITS:1 COG:ECs3392 KEGG:ns NR:ns ## COG: ECs3392 COG0443 # Protein_GI_number: 15832646 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli O157:H7 # 1 616 1 616 616 903 82.0 0 MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETLADAQGRHLLPSVVHYL KDEINVGYDARQQAAQDPVNTISSAKRLMGRSLADVQARYPHMPYQFEASENGLPMMITA GGSVNPIQVSAEILKALAERAKETLEGELDGVVITVPAYFDDAQRQGTKDAARLAGLHVL RLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDD FDHLLADFLREQSGYADRSDARIQRQFLDVAVEAKIALSNAEKVDVEVAGWKGCVTRAQF DELIGSLVKRTLLSCRRALKDAGVTADEVIEVVMVGGSTRVPLVRELVGDFFGRTPLTSI DPDRVVAIGAAIQADILVGNKPDSEMLLLDVIPLSLGLETMGGLVEKVIPRNTTIPVARA QEFTTFKDGQNAMMIHVVQGERELVQDNRSLARFTLRGIPAMPAGGAHIRVTFQVDADGL LSVTAMEKSTGVQSSIQVKPSYGLSDDEIITMIKDSMANATGDISARMLAEQKVEAARVL ESLNGALAEDSALLSESELGNIKQAVTALEQAAAGDVAGDIEAAIKVLDAQTQEFAARRM DASVRRALAGHSVDEV >gi|316920349|gb|ADCU01000001.1| GENE 58 64264 - 64599 373 111 aa, chain + ## HITS:1 COG:YPO2891 KEGG:ns NR:ns ## COG: YPO2891 COG0633 # Protein_GI_number: 16123082 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Yersinia pestis # 1 111 1 111 111 188 87.0 3e-48 MPKIVFLPNQEHCPDGAVLEAQEGETILDVALRNGIEIEHACEKSCACTTCHCIVREGFD SLEESSELEDDMLDKAWGLEPESRLSCQAKVADQDLVVEIPRYTVNHAREH >gi|316920349|gb|ADCU01000001.1| GENE 59 64670 - 64870 304 66 aa, chain + ## HITS:1 COG:ECs3390 KEGG:ns NR:ns ## COG: ECs3390 COG2975 # Protein_GI_number: 15832644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 66 1 66 66 107 90.0 6e-24 MGIKWQDSREIGEALYDAFPDVDPKTVRFTDMHQWICDLEDFDDDPTKSNEKILEAILLV WLDEAE >gi|316920349|gb|ADCU01000001.1| GENE 60 65170 - 66468 1241 432 aa, chain + ## HITS:1 COG:STM2536 KEGG:ns NR:ns ## COG: STM2536 COG0260 # Protein_GI_number: 16765856 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Salmonella typhimurium LT2 # 4 426 3 425 427 697 79.0 0 MSNEFMPISLSHQPADARWGEKALLSSNAEGMVIHLNGSGELIAVQRAARKLDGQGIKQV HLSGEGWDLEKCWAFWQGYRGPKGSRQVQWPELSESDRAELDRRLKIVDWVRDTINAPAE DVGPSQLAQRAVDLMCSVACDNVSYRITKGEDLREQGYMGLHTVGRGSERSPVLLALDYN PTGNPDAPVLACLVGKGITFDSGGYSMKQSAFMDSMKSDMGGAATVTGALALAVSRGLNQ RVKLFLCCADNLVSGNAFKLGDIITYRNGKTVEIMNTDAEGRLVLADGLIDASEQNAEMI IDCATLTGAAKTALGNDYHALFSFDDALAADLLQSAEQENEAFWRLPLAEFHRSQLPSNF AELNNVAGAAYGAGASTAAAFLSYFVKEYRQGWLHIDCSATYRKSAVDQWAAGATGLGVR ALANLLLEKAKA >gi|316920349|gb|ADCU01000001.1| GENE 61 66557 - 67393 701 278 aa, chain + ## HITS:1 COG:no KEGG:Spro_3619 NR:ns ## KEGG: Spro_3619 # Name: not_defined # Def: enhanced serine sensitivity protein SseB # Organism: S.proteamaculans # Pathway: not_defined # 1 275 1 272 276 337 64.0 3e-91 MSSHHHDHHHDTPEEQLEKSLEKAVKDPAYRTLFYRTLLDSTVYILAESGVQDKGELIIA PNAELNIQHWEMQDGLSTIPFFSSLKMLQQAVEDEEQPFMALPVRDLFAMTKGAQLFLNP KCEYGKAFYPQEVAMLLQTGGMAQPMEQVIDGGSKILLGQPEEYPSAMVDALTTLFTQRK IVRNAYLALFQDQTADEKPNLLIGLEIDGSDAEIELLIQETGSLASETAPEEEPVDLCLV TDEKGDAVSHYLKTHTQPFYQRRWGSWLRNSIPASGTA >gi|316920349|gb|ADCU01000001.1| GENE 62 67532 - 72520 4142 1662 aa, chain + ## HITS:1 COG:ECs3386 KEGG:ns NR:ns ## COG: ECs3386 COG2373 # Protein_GI_number: 15832640 # Func_class: R General function prediction only # Function: Large extracellular alpha-helical protein # Organism: Escherichia coli O157:H7 # 26 1660 11 1651 1653 1850 57.0 0 MREGSSLPDKHCTARILRRSALVAALITVLSACDNSDVKTTVPSDSATATTTQKKVLSDA DLAQLAKQSKGKALALLDASELQLDGAAALVLTFSVPLDPKQKFADRVHLVDTENGKIDG AWELADNLRELRLRHLEPKRKLLLTVDPELTALNGATLGKEAQQKIATKDIQPSVGFASR GSLLPGKVAAGLPVMALNVNSVDVNFYRIKSTSLPAFLSEWGYGQSVESWRADELLKMAD LVYTGRFDLNPQRNTREKLQLPLADIKPLQDSGVYLAVMQQAGRYTYSNPATLLTLSDIG VSLHSYHERMDVFTQALAGGGAMKDVALQVLDEKGRVLAEGKTDAQGHAQLGKSPKAKLL LATQNGQTSIIDLTQPALDLSEFDIDGPKGFTKQIFAFGPRDLYRPGETVIVNALLRDAD GQPLPEQPIKVDVLRPDDSVASSFVWKPENGLYQYRYALPEGAATGKWSLRFNLGDNQPR YYAINVEDFMPERMALDVKPQSVAPLEMNQSVTFDVSGRYLYGAPADSNRLQGQLYLRPL TEAVADLPGYRFGLEPEESLRRTLDEVDTTLDAQGKASIKTESQWGDVKSPVRLIFQASL LESGGRPVTRRSEQNVWPAKTLSAIRPLFGKQEIYDYQTNSYRSQPMVDENSEASFDVIY TDPQGKRLAKQGLKATLIQERRDYYWQWSESSGWQSQYDQKDLAVGEQTLNIAAEGSAKV SFPVEWGSYRIEVKDPDNGLINSVRFWAGYRWQDNTDGTGAVRPDQVKLKLDKPNYQPGE KAKVTITAPTAGKGYLMMESSEGPLWWQEIDVPEKGITVDVPLNQAWRRHDLYLSALVVR PGEKDRQVTPKRAVGLLHVPLNEEARRLDVTLTAQDKIRPNQTVPVQVNVASVKGEKQKD VMVLLSAVDVGILNVTDFQTPDPYDAFLGRKRYGADQYDIYGQLIEGSGRLGTLRFGGDG DMSRGGKKPPTDVNIVAHQMQRVALDENGNGVIQLPVPDFNGELRLMAQAWNGQNFGSAE RKMTVAAPVIAELQTPRFLAGGDSSQLALDVTNLSGHPQTLGVALTTSGLISLSGENSQP LVLENGERKTLTIPVTAQNGFGEGSVAVRIVGMQLPGEQISDYQHSWKIGVRPAYPAETR HLASVIQPGESWSVDAAQLSGLDAPEAKLLLTSRPPLNIARYIRELYAYPYGCAEQTTSG LYPSLYTNQQQLAQLGIKTSSDEVRRQKIETGINRLLGMQRYNGSFALWSSDGPEEYWLT AYVTDFLHRARERGFAVSDDGLKQADAVLLRYLQDRNRIDVSSSARPDATRFAVQAYAGF VLAKQKQAPLGALRELYERRAQAESGLPLVQLGIALKVMGDVPRSEEALKQGLAMSRQSN NYWLDDYGSPVRDEAMIIALMEEFNVEPKAQEQRLLSLSDRLTTIKYLSTQELNSVFMAS KDAIGQPEGPWKTVISSARGMDLASGESMQVKDYDESWLANGLVIDNQGESALYPRFDVV GYPSSAPQPMSNNLDIKRDFIGLDGKPVDLNQLKSGQLFLVHLDIWSSEHVPDALVVDLL PAGVELENQNLNDSSASMNEAAAEVVSLLDASRQSAVKHQEFRDDRYIAAIDVQPEQHTT LLYLARAVTPGKYLLPAPQVESMYIPQWRAVGSTPESVTIGQ >gi|316920349|gb|ADCU01000001.1| GENE 63 72531 - 74855 1109 774 aa, chain + ## HITS:1 COG:ECs3385 KEGG:ns NR:ns ## COG: ECs3385 COG4953 # Protein_GI_number: 15832639 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein PbpC # Organism: Escherichia coli O157:H7 # 2 774 4 770 770 956 62.0 0 MILLKRLCKWCGIIALLALLVVAGLWVADKVWPLPIKDEQVARIVVAADGSPLWRFADGQ GVWRYPVNVEQVSPYYLQALLTYEDRWFYQHPGINPFALARAAWQDVSHGRIISGGSTLS MQVARLLDPHSRTFGGKVRQVWRTVQLEWHLSKTQILELYLNRAPFGGTLQGIGAASWAY LGKPPDELTRSEAALLAVLPQAPSRLRPDRYPIRAQAARNKVLDRLAQYQVWTQQQVDDI KQEPVWLAPRQMPQSAPLLARRMIQTYPLQGVINTTIDASLQRQLETLAKGWGSRLPAKT SVGVLIVDHTDMQVKAYLGSLDFADNSRFGHVDMVRAWRSPGSTLKPFLYGLALDDGLIH NESLLQDVPRRFGDYRPGNFDTGFHGAVSASEALTRSLNLPAVQLLEAYGPKRFAAQLRN AGLELSFPDHAEPNLALILGGAGARLEQLVSTYSALARQGESADLRYVVGQKIYNRPLMS PGAAWIIRRTLAGQARPEPDDSLSAVVPLAWKTGTSFGYRDAWAIGVNARYTIGVWVGRP DGTPVAGQFGYATAVPLLFQLNNLLLNNPTLRGNGWPTDPRPSTVTRAMICWPSGQPSNE QDGNCRQRRSTWVLDGTTPPTLVAPEQESSQGIWRHEWLDDEGKRVAPECHGAVEKLLAL WPLPLEPWLPEAEKRANRIPAASKVCPPPVETLSAPLVLIGLSDGSILRRPPGKTDIDLR LTTQGGEGQRWWFLNGELVSQEASLFYRFTKVGRYQLTVMDGGGQIASVDFQVE >gi|316920349|gb|ADCU01000001.1| GENE 64 75154 - 75585 540 143 aa, chain + ## HITS:1 COG:STM2526 KEGG:ns NR:ns ## COG: STM2526 COG0105 # Protein_GI_number: 16765846 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Salmonella typhimurium LT2 # 1 143 1 143 143 226 76.0 1e-59 MTVERTFSIVKPNAVAKNVIGAIYSRFEAAGLKIVAAKMVHLTREQAEGFYAEHKGRPFF DGLVDFMTSGPIMVQVLEGKDAVRRNREIMGATNPENALAGTLRADYADSLTENAAHGSD SLESAEREIAYFFASNEVCPRTR >gi|316920349|gb|ADCU01000001.1| GENE 65 75873 - 77132 992 419 aa, chain + ## HITS:1 COG:yfgB KEGG:ns NR:ns ## COG: yfgB COG0820 # Protein_GI_number: 16130442 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Escherichia coli K12 # 52 419 17 384 384 711 91.0 0 MSKDPVIKAHSSHSDITSESIVVESNLSEISAPINAAQADAMQSAPANTSEKINLLDLDR QQMREFFAKLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRNKLKEIAEIRAPEVAEE QRSTDGTIKWAIQVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRV SEIIGQVWRAAKIIGAHKVTGQRPITNVVMMGMGEPLLNLNNVVPAMNIMLDDFGFGLSK RRVTLSTSGVVPALEKLGDMIDVALAISLHAPTDEIRDEIVPINRKYNIETFLGAVRRYL EKSNANQGRVTVEYVMLDHINDGMEHAHQLAECLKDTPCKINLIPWNPFPGAPYGRSSNS RVDRFSKVLMEYGFTVIVRKTRGDDIDAACGQLAGDVIDRTKRTMKKKMAGEPITVREV >gi|316920349|gb|ADCU01000001.1| GENE 66 77220 - 77972 410 250 aa, chain + ## HITS:1 COG:YPO2881 KEGG:ns NR:ns ## COG: YPO2881 COG3063 # Protein_GI_number: 16123073 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilF # Organism: Yersinia pestis # 1 250 1 249 249 312 69.0 5e-85 MKLKMRWVVGLLTVSLLAGCSSSKPESQQTATVSQSRLQLGLEYLNQGDLKAAQQNLEKA RDAAPDDYRTQLGMALYQQRVGDNQAAQESYQKAMNLAPQNGTVMNNYGAFLCSLGQYVP AQQQFSSAANLPDYGQVADSFENAGYCFLKAGQTEEARKLFSRALKSDPDKGVSLIAEAI REFDQGKRGDARIMLDVYNHILPASANSLWLQIRFAALDGRQTNLERYGKQLARNFPQSQ QYQQFLANEY >gi|316920349|gb|ADCU01000001.1| GENE 67 77962 - 78966 536 334 aa, chain + ## HITS:1 COG:ECs3378 KEGG:ns NR:ns ## COG: ECs3378 COG1426 # Protein_GI_number: 15832632 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 334 1 332 337 368 65.0 1e-101 MNTEAPQDQTAPLTTGERLRQGREKLELSQQAVAERLCLKVSTVRDIEEDKAPVDLASTF LRGYIRSYAKLVHIPEDELTPLLEKQAPLKAAKVAPMQSFSLGKKRKKRDGWLMMFTWLV VFVVIGLTGSWWWQNHKAQQEDIATMANESSAQLAKNGQLQSSDPSNGSDDVAAATDTQE SAGTPPDSSAADGQTANVPASSTATAPVANAETQQSQNNAVVSPSQAPIDTTTNANAATL PTASATVDAAAVVSNNLVMKFNADCWLEVKDSTGKTLFSGMQKSGASLDLAGTAPYKLKI GAPAAVQITYQGKPVDLSRFVKSSQVARLTLNAE >gi|316920349|gb|ADCU01000001.1| GENE 68 79173 - 80297 1126 374 aa, chain + ## HITS:1 COG:YPO2879 KEGG:ns NR:ns ## COG: YPO2879 COG0821 # Protein_GI_number: 16123071 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Yersinia pestis # 1 373 1 373 375 657 90.0 0 MHNESPIKRRKSTRIYVGNVPIGDGAPIAVQSMTNTKTTDVDATVKQIRALERVGVDIVR VSVPTMDAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNESRIRS VVDCARDKNIPIRIGINGGSLEKDIQEKFGEPTPEALLESAMRHVDILDRLNFDQFKVSV KASDVFLAVQSYRLLASRIDQPLHLGITEAGGARSGSVKSAVGLGMLLAEGIGDTLRISL AADPVEEVKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV SIIGCVVNGPGEALVSTIGVTGGHNKSGFYEDGVRQKDRFDNEKMIDQLEAKIRAKASML DVNKRIEVSQIDEK >gi|316920349|gb|ADCU01000001.1| GENE 69 80415 - 81689 1386 424 aa, chain + ## HITS:1 COG:ECs3376 KEGG:ns NR:ns ## COG: ECs3376 COG0124 # Protein_GI_number: 15832630 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 424 1 424 424 738 84.0 0 MAKNIQAIRGMNDYLPEDTALWQPIEAALKQVLTSYGYSEIRLPIVEQTPLFKRAIGEVT DVVEKEMYTFDDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKG RYRQFHQLGAEVFGLNGPDVDAELILLTARWWRALGISEHVSLELNSIGSLEARANYRDA LVAYLEQFKDKLDEDCKRRMYSNPLRVLDSKNPEVQALLNDAPRLSEYLDEESREHFAGL CQLLDDAGIAYTVNERLVRGLDYYNRTVFEWVTNSLGAQGTVCAGGRYDGLVAQLGGHAT PAVGFAMGLERLVLLVQAVNPDFQPQRAVDVYLISSGEGTQSAAMRLAEKIRDAYPQVKL MTNYGGGNFKKQFARADKWGARIALVLGENEMNAGQINVKNLQSGDQQTIAQDDVAAILA SMLA >gi|316920349|gb|ADCU01000001.1| GENE 70 81703 - 82323 741 206 aa, chain + ## HITS:1 COG:YPO2877 KEGG:ns NR:ns ## COG: YPO2877 COG2976 # Protein_GI_number: 16123069 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 206 1 211 211 232 65.0 3e-61 MEVYSTENEQVDALRRFFIENGKALAIGVVIGIGALLGWRYWQNHQQAEMTGASQSYQQA SEALTGGKADGVALAEKFIEKNANNYGVLAALQLAQHEVDQKDFAKAEHQLAWAQGQAKD ENLKSLIDLRLARVQLQENKLDDALKTLDLVKATGWVAMAQDVRGDVLVKKGDVKGAREA YSKGLASDASQSLQALLRMKLNNLSN >gi|316920349|gb|ADCU01000001.1| GENE 71 82335 - 83513 1088 392 aa, chain + ## HITS:1 COG:YPO2876 KEGG:ns NR:ns ## COG: YPO2876 COG1520 # Protein_GI_number: 16123068 # Func_class: S Function unknown # Function: FOG: WD40-like repeat # Organism: Yersinia pestis # 1 392 1 393 393 603 77.0 1e-172 MQLRKTLLVGLLSVTFLSGCSWFSSETDVVTMSPLPKVENQFTPTQVWSTSVGDGIGEYY SHLRPTWQDNRIYAADRMGVVKAMDAEKGDVIWSVNLAEKDGWFSHKTALLSGGLAVSGG KVYVGSERAVVYALNAEDGTEAWKTTVAGEAISRPVVSDGLVLIHTANGMLQALNEADGA IKWTVNLDMPSLTLRGESAPATAYGAAIVGGDNGRVSAVMMQQGQMIWQQRVAQPMGSTE IDRLNDVDTTPIVVDGVVYSLGYNGNLAALDLRSGQIQWKREMGSVNDFIVDAGRIYVVD QDDRVAALSADGGVSLWKQSDLLHRNLTAPALYNGYLVVGDSEGYLHWLNTDDGRFVAQQ KVDSSGLLSAPLVASDKLIIQARGGKVYAFTR >gi|316920349|gb|ADCU01000001.1| GENE 72 83704 - 85191 1858 495 aa, chain + ## HITS:1 COG:YPO2875 KEGG:ns NR:ns ## COG: YPO2875 COG1160 # Protein_GI_number: 16123067 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Yersinia pestis # 1 495 1 495 495 841 85.0 0 MIPVVALVGRPNVGKSTLFNRLTHTRDALVADFPGLTRDRKYGRAEVSGHEFIIIDTGGI DGTENGVETHMAEQSLMAIEEADIVLFMVDARAGLMPADEGIAQHLRSREKATFLVANKT DGIDPDVAIGDFYSLGFGEVYPIAASHGRGVAQLIEEALIPFVGVPEPERELTEEEANAA YWAEQEADEAEELAEEEEDDFNPQDLPIKIAIVGRPNVGKSTLTNRILGEDRVVVYDMPG TTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTDTVEKFSVIKTLQAIEDSNVALLVIDAR EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSEDVKTQVKEMLDLRLGFVDFARIHFISA LHGSGVGNLFESIQEAYDCATRRVSTSLLTRIMNMAQEDHQPPLVRGRRVKLKYAHAGGY NPPIVVIHGNQVKDLADSYKRYLMNYFRRSLKVMGTPIRIQFKEGDNPYAGKRNMLNPTQ LRKRKRLLAHIKKSK >gi|316920349|gb|ADCU01000001.1| GENE 73 85351 - 86307 591 318 aa, chain + ## HITS:1 COG:YPO2874 KEGG:ns NR:ns ## COG: YPO2874 COG0679 # Protein_GI_number: 16123066 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Yersinia pestis # 1 318 1 318 318 368 72.0 1e-102 MSWETWSFAFGVTVPNLLMLLLGVLLRRLRLLDDAFCDGATRLVFNLSLPCLLFFSIATN HSTLGNNFAFVVYGGVATIISFLLLELVALKLVKEPRERGIFVQGGFRANTAIVGLAYCA SAYGSEGVAIGSMYMAVTVILFNVLSVVTLTRTLSVDSQQKISWGKILRGVITNPLIIGI VLGLCYSFTRLPMPEVLSSTGKFISGMALPLALLCTGASIDWHAMFSSSNVAGYASAAKL IAVPVFMTLGGWLLGFRGVTLGVMFLFTSTPTAAASYVMTRAMGGNATLAANIIAITTVG SFFTTALGLYFLRNWGVI >gi|316920349|gb|ADCU01000001.1| GENE 74 86317 - 86538 125 73 aa, chain + ## HITS:1 COG:no KEGG:Spro_3603 NR:ns ## KEGG: Spro_3603 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 70 1 70 73 87 67.0 2e-16 MDVLCPKCQQQMQWINGDYYCPNCQQAYHQHADCPECGKPLQELKACGAVDYLCQHGHGM ISKKRVKFSYSEK >gi|316920349|gb|ADCU01000001.1| GENE 75 86631 - 87827 806 398 aa, chain - ## HITS:1 COG:CAC2970 KEGG:ns NR:ns ## COG: CAC2970 COG1168 # Protein_GI_number: 15896223 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Clostridium acetobutylicum # 1 393 1 384 384 290 33.0 3e-78 MYNFDEIIDRRVDKCRKWDYDYVCSRFGAVPRDFIPMWIADMDFKSPPEVIEGLRQIVEH GTFGYTYCFDEFYQAVIDFQAKQHNAHVEREWITLTYGTVSTLHYTIQAFCTEGDCILMN TPVYDPFAQAAERQKVRIIANPLAVKNNRYQLDFELLEDQIRQNQPKLYLFCSPHNPSGR IWSAEEIHRVSDLCQKYGVILVIDEVHAEHILQGNFINALNKDCAAPDNLILLTSPNKAF NLGGLKTSYSIIPNEALRSRFRQRLEKNSITSPNMFGVWGLIYAYNRGLPWLKVLNQYLA ENERYLYQFMSERLPTLKMMRTESSYLAWVDVSATGMSAYDFTHQLAHETGIVVEDGTHY VQNGENYIRINFGTPKALIEQAMARLEEFVQRRCCIKR >gi|316920349|gb|ADCU01000001.1| GENE 76 87842 - 89347 1139 501 aa, chain - ## HITS:1 COG:malX_1 KEGG:ns NR:ns ## COG: malX_1 COG1263 # Protein_GI_number: 16129579 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 423 23 449 450 418 51.0 1e-116 MFPVSLLAFMGLLLGVGSSITSPSTIKSFPFLGNELVQLTFGFVATVGGFAFTYLPIMFA MAIPLGLAKRNKAIGAFAGFVGYMIMNLSINYYLLSSHQLADASNMKQAGQAMVLGIQSL EMGVLGGIVVGVITYFLHERFQDTRLHDAFAFFSGIRFVPIITALTLSIVGLIIPFLWEY VAIGITAIGRLIQSTSVFGPFLYGVGVLLLKPFGLHHILLAMVRFTPAGGTEFVGGQEIS GALNIFYAELKAGLPFSPHVTAFLSQGFMPTFIFGLPAVAYAIYRTAKPENRPIIKGLLL SGVLVSVVTGISEPIEFLFLFIAPFLYVFHVIMSGLALMVMALLGVTIGNTDGGILDLLI FGIMQGTATKWYLVIPVGIIWFAIYFFVFRWYILKHDIKTPGREDDDITENVKAEKPSGN KKGAQYDPELILSALGGKENIDSLDNCITRLRLVVKDMALINKEILKKAGALAVVVLDNH SLQVIIGPQVQSVKTGIEALI >gi|316920349|gb|ADCU01000001.1| GENE 77 89791 - 91167 831 458 aa, chain - ## HITS:1 COG:xseA KEGG:ns NR:ns ## COG: xseA COG1570 # Protein_GI_number: 16130434 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Escherichia coli K12 # 3 452 2 452 456 599 72.0 1e-171 MSLPSSPPIFTVSRLNQTVRQLLEMEMGQIWLSGEISNLSQPSSGHWYFTLKDDRAQVRC AMFRNSNRRVAFRPQNGQQILMRATITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQR LQEEGLFDPAHKKPLPSPARCVGVVTSSSGAALHDILNVLQRRDPSLPVIIYPTAVQGVD APMQIVRAIELANQRKECDVLIVGRGGGSLEDLWSFNDERVAKAIFASQIPIVSAVGHET DVTIADFVGDLRAPTPSAAAELVSRNQTELMRQMLSQQQRMEMAMDYYLARHQQRFTRLN HRLQQQHPQLRLARQNTLLLKLRRRLDEAVQTRLRLAERQQERLSQRLNQQQPSAQIQRN QQRLAQIHNRMELLIQRQLSSSRERFGALCSQLEGVSPLATLSRGFSVTQSPNGNVLKSV KQVNNGELLKTRLQDGWIESTVTAITPHPKKRVSKRDA >gi|316920349|gb|ADCU01000001.1| GENE 78 91338 - 92804 1724 488 aa, chain + ## HITS:1 COG:YPO2871_3 KEGG:ns NR:ns ## COG: YPO2871_3 COG0516 # Protein_GI_number: 16123063 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Yersinia pestis # 207 486 1 280 281 474 93.0 1e-133 MLRIVKEALTFDDVLLVPAHSTVLPNTADLSTQLTSSIRMNIPMLSAAMDTVTEARLAIA LAQEGGIGFIHKNMSIERQADEVRRVKKHESGVVKDPQTVTPTTTLREVKELTERNGFAG YPVVTDELELVGIITGRDVRFVTDLEQPVTAVMTPKERLVTVKEGEAREVVLQRMHEKRV EKALVVDENFHLCGMITVKDFQKAERKPNACKDEHGRLRVGAAVGAGAGNEERIAALVEA GVDVLLIDSSHGHSEGVLQRIRETRAKFPDLQIIGGNVATAAGARALAEAGVNAVKVGIG PGSICTTRIVTGVGVPQITAVSDAVEALEGTGIPVIADGGIRFSGDIAKALAAGASCVMV GGMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGR VAYKGHLKAIIHQQMGGLRSCMGLTGCATIDELRTKAEFVRISGAGIQESHVHDVTITKE SPNYRMGS >gi|316920349|gb|ADCU01000001.1| GENE 79 92907 - 94484 1598 525 aa, chain + ## HITS:1 COG:YPO2870_2 KEGG:ns NR:ns ## COG: YPO2870_2 COG0519 # Protein_GI_number: 16123062 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Yersinia pestis # 207 525 1 319 319 630 93.0 1e-180 MTQNIHKHRILILDFGSQYTQLLARRVREIGVYCELWAWDVTEEQIREFNPSGIILSGGP ESTTENNSPRAPEYVFTAGVPVFGVCYGMQTMAMQLGGHVESSNEREFGYAQVEVTAHSK MFDDIKDSLTKDGTPVLDVWMSHGDKVTAIPSDFVTVASTETCPYAIMANDEKRFYGVQF HPEVTHTHQGQRMLERFILDICGCEALWTPATIIEDAVVRLREQVGEDEVILGLSGGVDS SVTALLLHRAIGKRLTCVFVDNGLLRLNEGEQVMDMFGDKFGLNIIHVKAEDRFLNALAG INDPEAKRKTIGRVFVEVFDEEACKQPNVKWLAQGTIYPDVIESAASATGKAHVIKSHHN VGGLPKEMKLGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEY CDLLRRADAIFIEELHKADLYNKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDF MTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE >gi|316920349|gb|ADCU01000001.1| GENE 80 94796 - 96853 1366 685 aa, chain + ## HITS:1 COG:no KEGG:Spro_0225 NR:ns ## KEGG: Spro_0225 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 14 685 7 680 685 875 68.0 0 MPHFDLSSNGNPFRTLSLAALIAAALVFPQSSFACGPDFPNRLLLNRNDTLLSMPEGNFV FEASRLVPVDKQLPLWKAPVSSTLGTSSKPVPLSPEQRIIADMRQTHSVEAASAIDAKSL SNAARLYTLGAVAFGEKDPRASEYFQQVLALPVAEQGEWGLRAQYSLGRVQMNDYGTPED VSGLNTPPASHPKKEQLEQALASFQQVIDNVKSGAVDPEQLALSSLGQQARIHLWLGDII PATKLYAQQAAQGDTDGGLSLMYISGYLIRPENRDVLKQAISDPLVQQLVTIELFARSSN LQMGNTKPEQTIAPILALLVDSVKSGFRGSDRLAALAYRSGQYTMAASLLKNAGDGGVAW WLRAKMALRDGDVKSATEAYAKAASAFPSDESWGLQRNDDYAPEMITPVCRVSGEQSILA LNRGDYLQAMAFMYQGKENYWADVADIAERVLTIDELKRFVDEHIPAPSTPLKPINPDGY SDHQITQDEKLRDLLARRMMRAGRYQEAVNYFAFPAYRQFAQEFVDSMNAAKNKTSDKRA KAKAYYHAATLLREQGLEFMGYEMTPDYAIYGAGISYLGDAFDTRDLQHKSWINVAEASR AVKSLPEADNHFLHYRWRAVDLAQKAANLLPPKSQAYAAVLCNATSWVIAYDTKTSRALY QRYIKNGSYYDWAAKFGENCPEPQF >gi|316920349|gb|ADCU01000001.1| GENE 81 97028 - 98311 1265 427 aa, chain - ## HITS:1 COG:YPO3389 KEGG:ns NR:ns ## COG: YPO3389 COG0001 # Protein_GI_number: 16123538 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Yersinia pestis # 1 426 1 426 426 773 86.0 0 MSKSESLYAQAKELIPGGVNSPVRAFTGVGGVPLFIERADGAYLYDADGKAYIDYVGSWG PMVLGHNHPAIREAVLEAVGRGLSFGAPTEMEVKMAQLVTDLVPSMDMVRMVNSGTEATM SAIRLARGFTGRDKIIKFEGCYHGHADHLLVKAGSGALTLGQPNSPGVPADFAKHTLTCT YNDVESVMQAFKQYPNDIACIIVEPVAGNMNCIPPLPEFLPGLRELCDQYGALLIIDEVM TGFRVALAGAQDYYGVTPDLTCLGKIIGGGMPVGAFGGRRDVMEALAPTGPVYQAGTLSG NPVAMAAGFACLNEISQPGIYPQLTELTDNLASGLLNAAQKEGIPLVVNHVGGMFGIFFT DQETVTCYADVTRCDVDRFKQFFHLMLEEGVYFAPSAFEAGFMSLAHSQEDIQKTIDAAR RCFVKMK >gi|316920349|gb|ADCU01000001.1| GENE 82 98560 - 99996 1371 478 aa, chain + ## HITS:1 COG:STM0203 KEGG:ns NR:ns ## COG: STM0203 COG0038 # Protein_GI_number: 16763593 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Salmonella typhimurium LT2 # 25 465 25 465 473 647 78.0 0 MTQKEQHTSLPSATRLRRSDVMLQILRRDKTPVAILFMAAVVGTLAGLIGVAFEKCVDWV QQQRLGGLAHVADYWIIVWPMAFIGSALLAMFGYYLVRRFAPEAGGSGIPEIEGALENLR PVRWWRVIPVKFFGGMGTLGAGMVLGREGPTVQMGGNLGQMVFDLFRARSTEARHSLLAT GAAAGLTAAFNAPLAGILFVIEEMRPQFRYSLISIKAVFIGVIMSCVVFRYFNGERTVIE VGKLGSVGINTLWLYLILGMVFGVVGVLFNRGVFRAQDMFMRMHGGDWRKLVLIGGVLGG LCGVLGLIQQEAAGGGFNLIPIAAAGNYTVGMLLFIFIARVVTTLLCFGSGAPGGIFAPM LALGTLLGTAFGMASAHLFPQYGIEAGAFAIAGMGALFAATVRAPLTGIVLVLEMTDNYQ LILPMIITCLGATLLAQFLGGKPLYSCILERTLKRQEQAQEQAAQQEAEKTSLPTSNT >gi|316920349|gb|ADCU01000001.1| GENE 83 100122 - 100466 369 114 aa, chain + ## HITS:1 COG:STM0204 KEGG:ns NR:ns ## COG: STM0204 COG0316 # Protein_GI_number: 16763594 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 114 16 129 129 210 92.0 5e-55 MSEDMALPLQFTEAAANKVKVLIADEENPDLKLRVYITGGGCSGFQYGFTFDDKVNEGDM TIEKQGVMLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKTTCGCGSSFSI >gi|316920349|gb|ADCU01000001.1| GENE 84 100530 - 100958 296 142 aa, chain - ## HITS:1 COG:STM4288 KEGG:ns NR:ns ## COG: STM4288 COG2764 # Protein_GI_number: 16767538 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 139 1 142 147 125 42.0 3e-29 MQLSTYLFFDGNAEQALTFYTQALGAEVLHKIRFGEAPVDDSQCATTPPFPADKIMHASL KIGDGLLMLSDGNMCAEEKKHGGFSVSLHSNDLAQGKTWFERLSVGANVTMPFQETFWAL GFGMLTDRFGIPWMVNVEKEMG >gi|316920349|gb|ADCU01000001.1| GENE 85 101200 - 101424 124 74 aa, chain + ## HITS:1 COG:no KEGG:Dd1591_2087 NR:ns ## KEGG: Dd1591_2087 # Name: not_defined # Def: putative sugar-specific permease SgaT/UlaA # Organism: D.zeae # Pathway: Ascorbate and aldarate metabolism [PATH:dze00053]; Phosphotransferase system (PTS) [PATH:dze02060] # 1 65 340 404 425 84 73.0 2e-15 MLGLPIIVPGILASFTCGGTAAIFGNATGGLSGAIIASFVNGLLLYFLPALVLPLFSYLG ATGVTCWPDAQSSA >gi|316920349|gb|ADCU01000001.1| GENE 86 101696 - 104350 1898 884 aa, chain - ## HITS:1 COG:ybgG KEGG:ns NR:ns ## COG: ybgG COG0383 # Protein_GI_number: 16128707 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Escherichia coli K12 # 7 882 2 876 877 1227 65.0 0 MTNSTTKTTSRVHITPHMHWDREWYFTTEESRVLLVNNMEEILQRLEQDADYKFYVLDGQ TAILEDYFSVCPHNRERVKALVQAGKLIVGPWYTQTDTMMVSAESIVRNLMYGMRDCLSL GEPMKIGYLPDSFSMSSQLPHIFNGFGITRAMFWRGCSERHGTDKTEFLWQSNDGSEVTT QVLPLGYAIGKYLPSDEAGLRDRLDKYFPVLEQASITKDILLPNGHDQMPLQQNIFAVMD KLREIYPDREFILSRFEEVFDRIEAIHDQLPVLRGEFNDGKYMRVHRTISSTRMDIKQAH AAIENKIVNILEPLCAIAWSLGFDYHHGLFEKMWKEILKNHAHDSISCCCSDKVHQEVMS RFILADDMAESLIQFTLRKIADNLHNQHEISDSLTLFNFSPYARDEVINTTIRIRANAFR LTDNEGKEVPYFIRASREIDPGLVDRQIVHYGNYDPFMEFDIQLERRLPAMGYTTLRITQ ADTQLLSNEDNHDQALENAFYRITVNTNGSLNIFDKQADIHYEQALLLENGGDDGDEYDY SPPREEWLMTSEQAQAQTEFIHQPLQSIAVIQFAQPVPASLAERATHCASLSMPVTLCVT LAKNSRRIDVDITLENLAEDHRLRVLIPTPFPSQNVLADNPFGTMTRPTRDPAMQHWEQD GWKEAPIPVWQMLNFAALQGDNAGMALFTQGLREFEIVGEQNDTFALTLFRSVGVLGKEE LLLRPGRPSGIKLPTPDSQMKGKHHFQFALFGFTGTALEAGVPQFARDYLTPIRCYNKMP YNAMKLNLAPHQIPHHYSLLEMPRIGVMLSALKKAEDRDELIIRCYNPSEQAPAMGEVSI HPQTIHWSEAGMDEILREETQYQPGDMGNFAPCQSKTFSFALKK >gi|316920349|gb|ADCU01000001.1| GENE 87 104410 - 106323 1474 637 aa, chain - ## HITS:1 COG:hrsA_3 KEGG:ns NR:ns ## COG: hrsA_3 COG1299 # Protein_GI_number: 16128706 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 284 635 5 356 360 518 78.0 1e-146 MDLIHLTSPELIVLRQSFTHRDEALDALIQRLESQGILHDANAFRTAVMQREAEGPTALG ESLAVPHGKSDSVRQAAFAMATLCQPLEWDGVDGPEPVSLIFLLAIPSAEAGSTHIQLLT TLTTMLVDDEVRNALMQAQTPQQVLALLSRTPAEKSQVENDLSTAAAPLVVCVTACPAGI AHTYMAAEYLEKAGRELGIRVLVEKQGANGVEDRLDESQIKQATACIFAAEVAIKESERF AALPKLQVPVAEPIRHAKALLQQAITLAEQPVSTVETQPKPGWKQEVKQALLSGISFAVP LIVAGGTVLAVAVLLAQMFGWQDLYAQKDSWLWMYRQLGGNMLGTLMVPVLAGYIAWSLA DKPALTPGFVAGICANLIGAGFLGGVAGGLIAGYVMRWVKKHIRLSPNFNGFLSFYLYPV IGTLVVGSIMLFVIGEPVAWINNGLTHWLNGLSGTNAILLGAIVAFMCSFDLGGPVNKAA YAFCLGAMANGVYGPYAIFGATKMVSAFTVTASTIIAPQLFRSFEIETGKSTWLLGLAGI TEGAIPMAIEDPLRVIGSFLLGSVVTGAIVGGAGIGLSTPGACIFSLFLLSDNGLGGIYA ALLWFGAALLGTVISTFSLLLWRRYACQKGSFAPDIK >gi|316920349|gb|ADCU01000001.1| GENE 88 106484 - 107254 569 256 aa, chain + ## HITS:1 COG:farR KEGG:ns NR:ns ## COG: farR COG2188 # Protein_GI_number: 16128705 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 19 251 4 236 240 302 66.0 3e-82 MVIGMRMGVLVSHQSVSSKPIYRQIADDIRNKIQKGELKAGDALPTEARLREMYSVSRVT VRQAIRLLVEQQILESIQGSGTYVKEAKVNYDIYQLTSFDEKLINHNIHTHSDVLTFTVM TPQPIVAEELSLNEGERVWYIKRLRYLGDKAVTLEETWMPLALFPDLTFQVMEGSKYVWI EQVKQLSIERSEQEIIPRMPSKEMAQLLGLAADKPILEKVSKGYLSDGRLFEYSRNYFST DDYKFTLVARRHPASA >gi|316920349|gb|ADCU01000001.1| GENE 89 107255 - 107869 793 204 aa, chain - ## HITS:1 COG:YPO3386 KEGG:ns NR:ns ## COG: YPO3386 COG2860 # Protein_GI_number: 16123535 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 203 1 203 204 293 88.0 2e-79 MLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVK DPTDLVVAMITCLATIVLVRQPRRLPSWILPVLDAVGLAVFVGIGVNKAFAGGAGPLIAV CMGVITGVGGGMIRDVLAREIPMILRTEIYATACIIGGIVHVTAYATFNMELQNAMMLGM FVTLAIRLAAIRWHLKLPTFTLDS >gi|316920349|gb|ADCU01000001.1| GENE 90 108085 - 108903 657 272 aa, chain - ## HITS:1 COG:YPO3385 KEGG:ns NR:ns ## COG: YPO3385 COG0614 # Protein_GI_number: 16123534 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Yersinia pestis # 3 271 8 275 280 355 68.0 8e-98 MKPVSRLFGVLWLLLCLPLFAADRVISLSPHTTEMAYAAGLGDKMIAASAYSDYPPAAEK LEKVASWQGINLERILALKPDLILAWRGGNPQRVLDQLSGFGIPIFYSDPKTIDGIADDL DRLATYSPTHQIAHDAASHFRDQVKVLREKYHRPHPSRVLMQFGTQPLFTTSKATIQSDL LSLCGATNIFADSPVPWPQVSREQVIMRKPQVIVVSGSQKQVETVKQFWQPQLNVPVIAI NEDWLNRSGPRIILAAQTLCEQLDTLSVKTPR >gi|316920349|gb|ADCU01000001.1| GENE 91 108928 - 109629 791 233 aa, chain - ## HITS:1 COG:YPO3384 KEGG:ns NR:ns ## COG: YPO3384 COG0775 # Protein_GI_number: 16123533 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Yersinia pestis # 1 233 1 233 233 350 81.0 1e-96 MKVGIIGAMEQEVAVLRDRIENRQTMQRAGCEIYTGTLCGVEVALLKSGIGKVSAAMGTT LLLEHFHPDVVINTGSAGGLASTLTVGDIVVSDEVRYHDADVTAFGYEPGQMAGCPAAFI ADADLIALAERCITALNLNAVRGLICSGDAFINGAEPLARIRSTFPKVAAVEMEAAAVAH VCHAFKTPFVVVRAISDVADKESHLSFDEFLVVAAQQSSLMVEAMLQEFAKRA >gi|316920349|gb|ADCU01000001.1| GENE 92 109795 - 111306 1182 503 aa, chain + ## HITS:1 COG:YPO3383 KEGG:ns NR:ns ## COG: YPO3383 COG0232 # Protein_GI_number: 16123532 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Yersinia pestis # 3 503 5 506 506 683 68.0 0 MTNFSNKFNYQRYFSSPINVEDEYDIIRQFESDRGRIVNSAAIRRLQQKTQVFPLERNAA VRSRLTHSMEVQQVGRHIAKEILHDLRRHDRLNEMGLALFIDPFESIVEMACLLHDVGNP PFGHFGEAALNNWFRQHLGVDTQGNLLTDEMSCQVACLRLKAGDSELNSLRTRVRADLSY FEGNAQAIRLVHSLLKLNLTYAQIACVLKYTRPAYWQGEVPANYHYLMKKPGYYLAEEKF IQRLRQELEMKEFHRFPLTYIMEAADDISYCVADLEDAVEKNILTVDQLRAYLESEWGRV EKGDLFDITVGEAYRRQKEKYGHRSTDDLFFMYLRVNVVKALVPHAARRFIENLPQIVDG SFNQALLEASDSANHLLSVFKKVAFQHVFNHHEVEQLELQGYRVIGGLLDIYSPLLQMPL ADFAQLVKDDTHRGYPIETRLFHKLSVKHRLAYGEALELLEVQSPDEFMVWEYYYRARLI QDYISGMTDLYAYDEYRRLMAAE >gi|316920349|gb|ADCU01000001.1| GENE 93 111561 - 112988 1394 475 aa, chain + ## HITS:1 COG:YPO3382 KEGG:ns NR:ns ## COG: YPO3382 COG0265 # Protein_GI_number: 16123531 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Yersinia pestis # 1 475 1 481 481 667 79.0 0 MKKSTLVLSAVALSLGMALSPMSASAAETASAVTSQQLPSLAPMLEKVMPSVVSINVEGS ATVNNNGRMPQQFQQFFGDNSPFCQDGSPFSGSPMCQGGGANGPSKEKFKALGSGVIIDA AKGYVATNNHVVENADSIQVQLSDGRKYEAKVIGTDPRTDIALIQLKDAKNLTAIKMADS DALRVGDYTVAIGNPYGLGETVTSGIVSALGRSGLNVENYENFIQTDAAINRGNSGGALV NLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTGQMVEFGQVKRGELGIMGTELNSE LAKAMKVDAQRGAFISQVLPKSSAAKAGIKAGDVVVSLNGKPISSFASFRAEIGTMPVGS KLKLGLIRDGKPISIDVTLEQSQQAQVASSNVFAGIEGAELSNVTTGKVKGVKVDNVQKG STAARVGLQKGDIILGVNQQPVANLGELRKIMDSKPPVLALNILRGDNSLYLLMQ >gi|316920349|gb|ADCU01000001.1| GENE 94 113247 - 113531 379 94 aa, chain + ## HITS:1 COG:no KEGG:Dd586_1919 NR:ns ## KEGG: Dd586_1919 # Name: not_defined # Def: putative DNA-damage-inducible protein J # Organism: D.dadantii_Ech586 # Pathway: not_defined # 1 94 2 95 95 75 61.0 4e-13 MSTIHFRIDEETKRLAMQAAERKKMSLTELVRERVEALADEERRFQLENANMELETLIEQ AFSDYDSGKMEFISDEQMNSEMGSLKDLARQGKL >gi|316920349|gb|ADCU01000001.1| GENE 95 113528 - 113866 82 112 aa, chain + ## HITS:1 COG:no KEGG:Dd586_1920 NR:ns ## KEGG: Dd586_1920 # Name: not_defined # Def: addiction module toxin, RelE/StbE family # Organism: D.dadantii_Ech586 # Pathway: not_defined # 2 99 3 100 101 101 48.0 1e-20 MNSVFWGNQAVADRMSIFRFLVHKAGAKVAIATDERFIALSSLLSEHPKSGHAINGNMQR RRLIVPHFPFVMVYALESHSVRILRVIYTSRKIAVNYTQKSSLPIKKPRPKS >gi|316920349|gb|ADCU01000001.1| GENE 96 114026 - 115504 1209 492 aa, chain - ## HITS:1 COG:YPO3268 KEGG:ns NR:ns ## COG: YPO3268 COG0477 # Protein_GI_number: 16123425 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 492 20 511 511 796 84.0 0 MATFMQVLDSTIANVAIPTISGNLGASNSQGTWVITSFGVANAISIPITGWLAKRFGEVR LFLWSTILFAAASWLCGISSSLEMLIFFRVLQGIVAGPLIPLSQSLLLSNYPPAKRSMAL AMWSMTVIVAPICGPVLGGYISDNYHWGWIFFINVPLGIAVALVAMSTLKGRETKTEIKP IDTVGLVLLALGVGCLQVMLDKGKELDWFNSTEIIVLTVIAVVALCFLLVWELTDEHPVV DLSLFKMRNFTIGVLCISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGLIPVIL SPIIGKFAPKLDMRRLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQGFAVACFFM PLTTISLSGLPPERLAAASSLSNFCRTLAGSIGTSITTTLWTRREALHHSQLTESVNPYN PLAQQTYSELEKLGMSSKQASAYLANEITSQGLIISANEIFWMSAGVFLVLLVLIWFARP PFSTAGGGGGAH >gi|316920349|gb|ADCU01000001.1| GENE 97 115579 - 116754 1328 391 aa, chain - ## HITS:1 COG:YPO3267 KEGG:ns NR:ns ## COG: YPO3267 COG1566 # Protein_GI_number: 16123424 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Yersinia pestis # 1 390 1 389 390 554 75.0 1e-157 MSESVAAQTTQQQPSNKKRQRKTWLTILTVIFVVIGIAYLAYWFLVLRHHQETDDAYVTG NQVQINAQVSGSVTKVYFDGTDLVKAGDILVTLDRTDAEQAYEKAKTALANSVRQTHQLI INGKQYQANIQLRKTELNKATDDYKRRQVLGSVNAIGREELQHAQDAVESAKAALDVAIQ QYNANQALILNTPLEKQPAIQQAAAQVRDAWLALERTQIRSPITGYVSRRSVQVGAQITP STPLMAVVPDNQLWIDANFKETQLAGMRIGQPATVISDMYGDDVVYKGKVVGLDMGTGSA FSLLPAQNATGNWIKVVQRLPVRIELDAKQIAEHPLRIGLSTLVTVDTANADGLVLANNV RKTPAYESNVLTLNLEPVNQVIAEIIQANAS >gi|316920349|gb|ADCU01000001.1| GENE 98 116779 - 118236 460 485 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 9 477 6 457 460 181 26 5e-44 MQFPIRGQFTALTAVLLLAGCASTNNIEPQSSLINSQQLQLSTSTNTAKAVSINWWTAAN DAQLNALMADALKNAPTLKQAAARVREAENAVGMANSANGPNLDLTASSRRDRFSKNTIQ PLAPNMPNPQPLYETTNNLGLNFSYEFDWWGKYRNQVNAAKAQVNAAQAEQQQTALSLTS AIASAYYQLQSNYAMQELLNKQIQSYQALAEINQQQYNAGVVGIEVWQQSQAQVDINRQM VTQIQTQIDLLSHQIAALTGKSAAGKSAIQRVSLPDSQWLTPPTELTINLLGQRPDITAQ RELVESYEQSVQAARKDFYPSVSISGFAGFTTANFKGTNPTLLEAASKAWNLAPAISLPI FHAGALQSKLGEESALYDQAVESYNQTILNAVQDAADAITQQQSASQMYQQAQGASQSTE QVYRVAQAQYQSGLTGRLPMLNSETQLLQQQQAELNAKNNLLQSKIGLIRSLGGGYQAPV VNSKA >gi|316920349|gb|ADCU01000001.1| GENE 99 118271 - 118789 537 172 aa, chain - ## HITS:1 COG:YPO3266 KEGG:ns NR:ns ## COG: YPO3266 COG1846 # Protein_GI_number: 16123423 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 168 1 168 170 229 82.0 2e-60 MSSSIAHIEEMLKLRALRQKDFPYQEILLTRLCMHMQSKLLENRNKMLKEQGINETLFMA LITLDAQESKSIQPSELSAALGSSRTNATRIADELEKRGWIERQESDSDRRCLHLHLTEA GEAFLGEILPPQHKCLHFLWSTLTADEQQVLETLTRKLLGRIEEMEQSGLTQ >gi|316920349|gb|ADCU01000001.1| GENE 100 118947 - 119321 165 124 aa, chain - ## HITS:1 COG:no KEGG:Spro_3740 NR:ns ## KEGG: Spro_3740 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 12 123 1 112 117 121 58.0 7e-27 MINNFTFSSLAMDSTVVTISLIVGGANFLFRYLPLRLGRARKSDTAKQGIVSLLLDNIGI ASICALLVVSSTPEILSHHERFIPTLCGFLALSLCFYRTQSIIMSTISGAVTFGLVFKMM MMFT >gi|316920349|gb|ADCU01000001.1| GENE 101 119311 - 120072 442 253 aa, chain - ## HITS:1 COG:YPO3264 KEGG:ns NR:ns ## COG: YPO3264 COG1296 # Protein_GI_number: 16123421 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Yersinia pestis # 11 241 9 239 257 331 78.0 8e-91 MQTQISAEQAAETIVTPSTFKDGIADSLPIVIGYLPVAFAFGLTAVKLGFSPLESIFFSS VIYAGASQFVITALLSAGMSLWISALTVMAMDIRHILYGPSLRHRIITKMSPGKTALWAF GLTDEVFAAATSKLMRDNRRWSENWMIGIALCSWLSWVFGTAVGALFGNGPLKAYPAIEA SLTFMLPALFLSFLLASFKRQQSFTVIASLAASLAALLIFSIPASILAGIAAGCLASLFG PKPQPLPEVCNDK >gi|316920349|gb|ADCU01000001.1| GENE 102 120304 - 120798 387 164 aa, chain - ## HITS:1 COG:no KEGG:ETAE_2763 NR:ns ## KEGG: ETAE_2763 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 158 1 158 161 186 58.0 2e-46 MIWLMLATLVVVFIIGFRVLNSDARRASQALTKRLNIEPVYVESMLSQMGKTAGGEFIQY LLQDSESHMGNAAGVLLIYQTFIVDESEESLTFWRSVLRKAHLPTEITHKHVRLALSFLR ELEPDPNEMASYRLRYNARFTAVVPEGEASNSNVFYIDGSSHRD >gi|316920349|gb|ADCU01000001.1| GENE 103 120888 - 121862 611 324 aa, chain - ## HITS:1 COG:ECs5188 KEGG:ns NR:ns ## COG: ECs5188 COG0697 # Protein_GI_number: 15834442 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 309 4 312 324 379 66.0 1e-105 MLIGVLYALTAGLMWGLIFVGPLIVPEYPASLQSVGRYLAFGLIALPLAWHDRHRLRQLI RTDWLEALKLTVVGNFIYYLCLASAIQRTGAPVSTMIIGTLPVVISVSANLKYSHRDGKL SWRHLAPSLLLIALGLGCVNVAELQSAHAPTDMFRYATGLVLAFIAVVCWTWYPMRNASW LRTHPDKSPTTWATAQGLVTLPLAVIGYALVWGHSTITESDFPMPFGPRPMVFVGLMIAI GLLCSWLGTLCWNQASQRLPTAKVGPLIVFETLAGLSYAFIWRHEWPPVLTLVGITCLII GVISAMRVKSTPVVITPLQTMDGR >gi|316920349|gb|ADCU01000001.1| GENE 104 121960 - 122781 596 273 aa, chain - ## HITS:1 COG:VCA1001 KEGG:ns NR:ns ## COG: VCA1001 COG2207 # Protein_GI_number: 15601754 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Vibrio cholerae # 12 270 10 276 277 163 37.0 3e-40 MHGVPAQFVDDRDRAQFKHFAHLPGVEVYRAHIEHHEFEPHTHEAYGIGAIEYGAERFRY RGVNHVAPADSLVLMNPDELHTGQSGTEGGWRYRMIYLTPEILAEVSGEPSWWFNDAVTH HPQFARATTALINALWQSDEPLAQSSLLSELLSLTRHWAKAPQPLRLDAPQRFAVVKEYL RAHLDKRMTLPELATLADLSPYHFLRQFKAQYHVTPQQMLMAYRLYEAKNLLTQGLPPAQ VAAAVGLTDQAHLTRAFNRFYGVTPARYQKQVR >gi|316920349|gb|ADCU01000001.1| GENE 105 122903 - 123457 623 184 aa, chain - ## HITS:1 COG:AGl212 KEGG:ns NR:ns ## COG: AGl212 COG0783 # Protein_GI_number: 15890216 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 14 180 46 212 212 228 63.0 6e-60 MSTPKLDKSKVGDAKKRQFIPLATPSDLGAEATKEISGAMNAILADIYALYLKTKNFHWH MSGPHFRDYHLLLDEQGAELFAMTDDIAERVRKVGGMTLHSIGQISKMQRIKDNNAEYVE PLDMLAELCEDNKLLAAELRAAHVVCSEHNDVSTTSLIENWVDQTERRVWFLFEACRQSQ TSGH >gi|316920349|gb|ADCU01000001.1| GENE 106 123767 - 124846 655 359 aa, chain - ## HITS:1 COG:STM0644 KEGG:ns NR:ns ## COG: STM0644 COG0079 # Protein_GI_number: 16764021 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Salmonella typhimurium LT2 # 4 357 5 358 364 429 58.0 1e-120 MAISSQHGGNILETALTLGVSPHAIIDFSANINPLGMPESLKHAIINQMAVAEKYPDVEY RELHAALARHHDCPDEWVMAGNGETELIFALVNQLQPAKALLLTPGFAEYRRALMRIGCK IVDYALLEEEGFQPDERLLEALTPDLDCLFLCTPNNPTGLLVDKSLLMAIADRCQQMNIA LILDEAFLDFIPTESGFIPLLAQYPHLYVLRSLTKFFAIPGLRLGYLVSANAPLVTRMKQ QREPWTINAFAALAGEIILDDVNYIAATHRWLAEEQPRMLAALEALPQLKVWPPTANYLF MRCTNSHINLQQALLEHHILIRHCANYPGLSADYYRVAIKNSQDNDRLIAALTQILSDG >gi|316920349|gb|ADCU01000001.1| GENE 107 125417 - 126781 975 454 aa, chain + ## HITS:1 COG:STM2035 KEGG:ns NR:ns ## COG: STM2035 COG1797 # Protein_GI_number: 16765365 # Func_class: H Coenzyme transport and metabolism # Function: Cobyrinic acid a,c-diamide synthase # Organism: Salmonella typhimurium LT2 # 3 452 7 456 459 605 64.0 1e-173 MKAFLIGGTGSGCGKTTLTLGLLRAFTRRGLKVQPYKVGPDYIDTGWHSAVSGVASRNLD AFMLPASTLNWLYNQHMQAADIAVIEGVMGLYDGFGTDPNYCSSAGMAKQLGCPVILLID GKAVSTSAAATVLGFCHFDPEVRIAGVIVNRVNSEPHYQLLKQAIEKYTQVPVLGRIPSL PNVSLPERHLGLITAHEQHDMDEQWNTLADHLEQHIDLDRLLALSNVEPATNASAPSLPA SESGRGLTMALADDEAFHFYYPDNLQLLEQIGVNIVRFSPLRDAALPECQMVYIGGGYPE LHAETLTKNHAMRQSLRDAHQRGVAIYAECGGLMYLGTSLKDQNGNTHEMTGIFAGESRM EGRLKRFGYCQATAQQDTVLAARGETLRGHEFHYSDFHADIPCAFQFEKQRDGVTLQRWQ GGYQRGNTLASYLHVHFYQRPEMLKHWLERGRAL >gi|316920349|gb|ADCU01000001.1| GENE 108 126778 - 127734 748 318 aa, chain + ## HITS:1 COG:STM2034 KEGG:ns NR:ns ## COG: STM2034 COG1270 # Protein_GI_number: 16765364 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobD/CbiB # Organism: Salmonella typhimurium LT2 # 6 302 5 301 319 355 62.0 5e-98 MISFSACLVAYLLDLRLGDPPTWPHPVRWIGNFITFLQGRIRAFCHTTTSLYIGGACLWL IVVGVSWGATYALLAFLTQINPWLSWAAQVWIIYTLLAGRCLSDAAMAVYVALQNGSLEE CRRQLSYIVGRDTSELDRPQVTRAVVETVAENSVDGVIAPLFFLFIGGVPLMMAYKAVNT LDSMVGYRTEKYRAIGCVSARMDDLANLIPARLSWLLLSLAARLLCLNGKQAFKIGWRDR YLHKSPNCAWSEATVAGALGIRLGGPNKYFGELVDKPWIGDEEREIDIQDIRLSIRLMMT ASALALALFALVRWLIVM >gi|316920349|gb|ADCU01000001.1| GENE 109 127760 - 128428 646 222 aa, chain + ## HITS:1 COG:STM2033 KEGG:ns NR:ns ## COG: STM2033 COG2082 # Protein_GI_number: 16765363 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin isomerase # Organism: Salmonella typhimurium LT2 # 9 221 1 210 210 249 62.0 4e-66 MTNNSGLTMDYNKNPQNIEQQSFEIISQIIAEERPSYRFVDEIQEKIIKRTIHTSADFEW LDILHFSPDVLGRITQALRNGCTIYTDTTMALSGINKTQLERLGCQWRCYIADPRAVDIA KTQGITRSMAAVDLAAQESGEKLFVFGNAPTALFRLLELYQQGVMTPAAVIGVPVGFVGA AESKQALAESHVPNIAALGRKGGSNIAAAIVNAILYHMRDAQ >gi|316920349|gb|ADCU01000001.1| GENE 110 128425 - 129588 1100 387 aa, chain + ## HITS:1 COG:STM2032 KEGG:ns NR:ns ## COG: STM2032 COG1903 # Protein_GI_number: 16765362 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiD # Organism: Salmonella typhimurium LT2 # 1 377 1 378 379 517 75.0 1e-146 MSENGLDTLWHNGKSYRKGYTTGSCATAAAKVAALMALRQQVINQVSIVTPSGITLRLNV EQPLICGQQASAAIRKDGGDDVDATHGMLIFAQVALNDSGSITIGGGEGVGTVTRKGIGL PIGSAAINRTPRQTIEQAVREVIGPERGADIVIFAPEGEERAQKTYNGRLGILGGISIIG TTGIVTPMSEESWKRSLALELEMKRAQGMTSVILVPGNHGERFVQEHMQIDAERVVTMSN FVGYMLQEAQRLGFQHVVLVGHLGKLIKVAAGIFHTHSHIADGRMETLVARLALLGAPHE FLRAVFECSTTEAAMELIEQQGWQAVYDDIAQAIGERVKQMLRFAPQPFCCDVVLFSFDN VVLGSNRPISEIVSALHTQMTYEKESL >gi|316920349|gb|ADCU01000001.1| GENE 111 129585 - 130187 519 200 aa, chain + ## HITS:1 COG:STM2031 KEGG:ns NR:ns ## COG: STM2031 COG2241 # Protein_GI_number: 16765361 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 1 # Organism: Salmonella typhimurium LT2 # 1 200 1 201 201 194 48.0 1e-49 MIHIVGMGPGDLDYITPLALRLIAQADVLVGWPRHLASCADFQGEKRSIGTDLAKAAAWL QCNADRNIVVLASGDPMLFGIGKRLSQDLEPAKIRIVPGISSIQYLFSQIAIDMNDIYIT SSHGKKPDFNFILQHDKVAMVTDLHIGPYQIAQEILLRGQKRTLVIGENLTYPDECIHIL PPEKVQQAYAMNVVVILNER >gi|316920349|gb|ADCU01000001.1| GENE 112 130177 - 130746 475 189 aa, chain + ## HITS:1 COG:STM2030 KEGG:ns NR:ns ## COG: STM2030 COG2242 # Protein_GI_number: 16765360 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 2 # Organism: Salmonella typhimurium LT2 # 1 188 1 188 192 219 55.0 2e-57 MKDDLFLRGHKVPMTKEEVRLAALERLNLPTAKRLIDVGAGTGSVSLEAALRYPDLQITA IERNPVALALIADNCRHFGCPNIAVVDADAPLPLDVRADAIFIGGSGGNLADIIDWSLGL LNDGGSLVMNFILLENYQQAFSQLQNRAVTELESSLIQVSRLTALGSGHYFKPNNPTYLI SCRKEQTHG >gi|316920349|gb|ADCU01000001.1| GENE 113 130739 - 131512 746 257 aa, chain + ## HITS:1 COG:STM2029 KEGG:ns NR:ns ## COG: STM2029 COG2875 # Protein_GI_number: 16765359 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-4 methylase # Organism: Salmonella typhimurium LT2 # 1 257 1 257 257 378 73.0 1e-105 MVEPIDPSQVYFIGAGPGDPELITLKGHRILSQADVVIYAGSLINHDLLNYCKPQAQCHD SAGLNLQQIIDLMVQGVRAGKRVVRLQTGDLSLYGSIREQGEELGKLGIGFSSVPGVSSF LGAASQLGVEYTVPEVSQSLVITRMSGRTPTPARESLESFAAHQTSMAIFLSVQEIEDVV QRLIDGGYPATTPVAVVYKATWPDHQTVRGTLENIAPRVRDAGIRKTALILVGAFLGDEY HYSKLYDAGFSHEYRQA >gi|316920349|gb|ADCU01000001.1| GENE 114 131493 - 132602 783 369 aa, chain + ## HITS:1 COG:STM2028 KEGG:ns NR:ns ## COG: STM2028 COG2073 # Protein_GI_number: 16765358 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiG # Organism: Salmonella typhimurium LT2 # 1 363 1 349 351 403 60.0 1e-112 MNTVRPEATKLNSLALFCLTPGGVRLAQRLQPMLPQISLHSESFTSEKLAVSGFSTFDGS FAASMAQAFTRFDALVVIGATGIVVRVLAPLLQDKLQDPAVVVLDERGQHAISLLSGHLG GANRLARQIAALIEAEPVITTATDVNEVAALDMLAQKLDAQLADFRQGVKRVNQLLVSGD RVGLWIDPMFDEHVSEQDRRGFIVVDDLAALPDLTALVCISWQANLPPLTLPVFKLVPKR VVLGVGCRRDTPFATVHHLLLQQLTLLNIDPLAFRAIGSITLKQDEAALQQLALRYAVPF HLFTPDALREHEHRFPCSEFVRKTVGVGCVSQPAAWLLLEKYGGGKFVGETLREQGVTLT LALTLQETF >gi|316920349|gb|ADCU01000001.1| GENE 115 132602 - 133342 826 246 aa, chain + ## HITS:1 COG:STM2027 KEGG:ns NR:ns ## COG: STM2027 COG1010 # Protein_GI_number: 16765357 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-3B methylase # Organism: Salmonella typhimurium LT2 # 1 241 1 241 241 393 79.0 1e-109 MLYVIGIGPGSQSMMTLEAIEAIRDADIIVGYKTYTHLVKALTTDKEVIKTGMCKEIERC QEALNLAVEGKKVALISSGDAGIYGMAGLILELVTKQKLDVEVKLIAGVTASTAAASLLG APLMHDFCHISLSDLLTPWPVIEQRVIAAAQADFVVCFYNPRSRGRAEHLSRAFDLMRPY VAASTPVGVVKAAGRKKQEKWITTFGEMDFENVDMTSLVIVGNKTTYCQDGLMITPRGYV LDPSDA >gi|316920349|gb|ADCU01000001.1| GENE 116 133429 - 134256 698 275 aa, chain + ## HITS:1 COG:STM2026 KEGG:ns NR:ns ## COG: STM2026 COG2099 # Protein_GI_number: 16765356 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6x reductase # Organism: Salmonella typhimurium LT2 # 19 270 8 258 263 263 53.0 4e-70 MFNNDMSHNATAKEFRLHVFGGTSDARRICQRLDAIGLSYSLSVATDAGRELAGEIKGEI IVGRMDASQMSAWLQQQNITHVIDASHPYAGVLSANIAGACSELHITLTRYLRPSEIEAL EHPLLHKVSSVEEACVLARNLGARILLTTGSKQLADFVRLLADRNLFARVLPTPEVLMQC RDLGLGVDNVLALKGPFSAEMNYATYRHCQADVVITKESGAEGGYQQKVAPCLALGIHCI VICRPPELFVAGQTQVTSLAELEPHLASWLQLQNN >gi|316920349|gb|ADCU01000001.1| GENE 117 134272 - 135063 776 263 aa, chain + ## HITS:1 COG:STM2025 KEGG:ns NR:ns ## COG: STM2025 COG4822 # Protein_GI_number: 16765355 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiK, Co2+ chelatase # Organism: Salmonella typhimurium LT2 # 1 263 1 264 264 353 67.0 2e-97 MKKAILIISFGTSYHETREKTIDACERRLAASCPDRDAFRAFTSEMIIRKLAKRDGMNID NPHQALMRLAEQGYQDVVIQSLHIINGDEYEKVVMQVNAHAGMFKRIRIGAPLLSSHQDF EQLIGAMQSQMPALADDERVVFMGHGATHHAFAAYACLDHMLMAHQIPAVVGAVESYPEI HHVVARLQRQHVRHVHLMPLMLVAGDHAINDMASDEEDSWKTQLAQAGIEATPWLQGLGE NPLIQQMFVEHLHEVINDVEEVA >gi|316920349|gb|ADCU01000001.1| GENE 118 135063 - 135803 642 246 aa, chain + ## HITS:1 COG:STM2024 KEGG:ns NR:ns ## COG: STM2024 COG2243 # Protein_GI_number: 16765354 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-2 methylase # Organism: Salmonella typhimurium LT2 # 5 235 1 231 237 295 61.0 5e-80 MNISVKGKVWAISTGPGSSDLITVRAARQLATLDVLYAPAGRKGGDSLALSIVREYLRPD LEIKERHFPMSADQGEKSSAWDGVAQEMRADADHGLQVGFITLGDAMLFSTWVFLLERLQ GGVDIEIIPGVTSFACIAARAQFPLAMEQQSMAVVACTAPESELEQALRNHECVVMMKVY GRVPQIRELLRRLNLLDHAMLMAEASLPNEQCFRHLDEISEQTALPYFSTILVNRTVSTK QSKEHQ >gi|316920349|gb|ADCU01000001.1| GENE 119 135800 - 136528 537 242 aa, chain + ## HITS:1 COG:STM2023 KEGG:ns NR:ns ## COG: STM2023 COG0310 # Protein_GI_number: 16765353 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, permease component # Organism: Salmonella typhimurium LT2 # 2 242 5 245 245 334 75.0 8e-92 MKNLQRFPLYGMALAVLLTLAPQEAFAMHIMEGFLPPFWALAWWLMFLPCLVIGATRLKN IVRDDSDKKVLLALCAAFIFVLSALKIPSVTGSCSHPTGVGLAVILFGPWVVSVLGAIVL LFQALFLAHGGLTTLGANGMSMAVIGPMAGYVVWKLATRAGIRRDVAVFLCAALADLVTY FVTSVQLGLAFPDPQLGVMASVTKFMAIFCLTQVPIAIAEGLLTVLIYDQLCKRQLIGAR SH >gi|316920349|gb|ADCU01000001.1| GENE 120 136530 - 136811 375 93 aa, chain + ## HITS:1 COG:STM2022 KEGG:ns NR:ns ## COG: STM2022 COG1930 # Protein_GI_number: 16765352 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 1 87 1 87 93 137 75.0 4e-33 MKKTLILILLVIALAVLPFFINHGGEYGGSDDQAEGVIAQMAPDYKPWFEPLYEPASGEI ESLLFTLQGSFGAAVIFYILGYYRGRRAAHVGD >gi|316920349|gb|ADCU01000001.1| GENE 121 136798 - 137475 509 225 aa, chain + ## HITS:1 COG:STM2021 KEGG:ns NR:ns ## COG: STM2021 COG0619 # Protein_GI_number: 16765351 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Salmonella typhimurium LT2 # 1 225 1 225 225 187 45.0 2e-47 MLEIDKLSYGSRWSQKKPEHKLVLYLVLLLMALLGTRLIQLGVLLLCAGLTCYLLRVGWR RYLRWLAVPLAFLFTGLLGVVLSFSWQADTLLYSIRIGHLALGVERSGLITGINTLCRSL AALASTYLFVLTTPFSQWVLLLKRSRLPLVLIEQVLLTYRFIFIFIEEAAAIHRAQSLRF GYVSLRSSYRSLSMLVGMLLARVMERHKQMSIALEVKLYNGDFHL >gi|316920349|gb|ADCU01000001.1| GENE 122 137475 - 138290 231 271 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 20 228 16 227 245 93 29 2e-17 MTPTFATQHLSFQYQDGETVLHDLSLDFSRGQVTGLLGANGCGKSTLFMNLLGILQPQQG AVLWQGKKLGYDKRSLRELRQQVAMVFQEPDQQIFYTDIDSDIAFSLRNLGMDEETIRQR TEQALSLVDALGFRHKPVQYLSHGQKKRVAIAGALVMNAEYLLLDEPTAGLDPAGRQQMI HIIHKIVAQGKRVVISSHDIDLIYEVCDYLYVLAQGKLVCEGSERDVFLQQEMLKQAGLV QPWLVKIHQQLGLPLFKTEHELFASMPKYVK >gi|316920349|gb|ADCU01000001.1| GENE 123 138300 - 139844 1372 514 aa, chain + ## HITS:1 COG:STM2019 KEGG:ns NR:ns ## COG: STM2019 COG1492 # Protein_GI_number: 16765349 # Func_class: H Coenzyme transport and metabolism # Function: Cobyric acid synthase # Organism: Salmonella typhimurium LT2 # 1 506 1 502 506 638 65.0 0 MALSIMVQGTASDVGKSVLVAGLCRIFHQDGYRVAPFKSQNMALNSGITADGGEMGRAQI FQAEAAGIEPDVRMNPVLLKPTSDLRAQVVLMGKVANQMDAVTYHEFKPQLLEQIAQVYR SLADEVDIMVLEGAGSPAEINLRDRDIVNMGMAEKVDVPVILVADIDRGGVFASIYGTLA LLEPAEKARVKGVIINKFRGDVSLLTSGLRQIEELTGVPIIGVMPWIEVQLEDEDGVALQ KGKYRHQDENLLDIAVIQTPYISNFTDFNALNAQPDVRLRYVSHHDELGYPDLLILPGSK NTLSDLSYLHKSGLTHQILLAHQQGTPVLGICGGFQMLGNHIVDGVESGVEQMAGLGLLD CETTFSQQKVTTQVSGEIRPDLAGVFAACQEHSLVGYEIHMGHTELGEQAQPFSVLHKRN GESINQCDGAIHLDGSVAGTYIHGFFDSDGLTRSLLNSLRERKGLEPLLGDEFHYQAFRE QQFDRLAAAMRENIDIEAVYAIMRDHLAMQEKPQ >gi|316920349|gb|ADCU01000001.1| GENE 124 139841 - 140389 418 182 aa, chain + ## HITS:1 COG:STM2018 KEGG:ns NR:ns ## COG: STM2018 COG2087 # Protein_GI_number: 16765348 # Func_class: H Coenzyme transport and metabolism # Function: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase # Organism: Salmonella typhimurium LT2 # 1 181 2 181 181 201 59.0 8e-52 MILITGGARSGKSALAEKLAAQHGHRVLYIATSVVTDEEMAQRIAHHRETRPAQWMTHEG YRDLGEIIRSQGGNSDAVMLECITTMVTNLLFDQSGNVAPEEMDFEHLEKMIHLQVDELI QGCERCNAPVYIVTNELGMGIVPDNLLARRFRDIAGRVNQRLAAQAQQVYLVVSGIEVKI KG >gi|316920349|gb|ADCU01000001.1| GENE 125 140498 - 141547 836 349 aa, chain + ## HITS:1 COG:cobT KEGG:ns NR:ns ## COG: cobT COG2038 # Protein_GI_number: 16129932 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 349 1 351 359 407 65.0 1e-113 MQTLEQIIAQIQPLNQDAMVKAQVKLDGLLKPTGSLGRLETLAIQLAGIFGEKNVNVNRK QIVVMAADHGVYDEGVAISPRVVTAIQAQNMIHGVTGVCVLAKHAGAEVVIVDAGIDCEP IEGAVDMRMARGSGNIAREAAMSREQAEFLLTKAADFAMTQAANGVRLLGVGELGMANTT PAAAIVSVMAKRQPEEVVGVGANFPSAQLHHKVDVVRRAIACNQPNATDGVDVLAKVGGF DLAGMTGLMLGAAAAGIPVVLDGFLSYASALIACQISPRVHDYLIPSHLSAEKGARIALQ QLKLEPYLQLEMRLGEGSGAAVAMNIVDAACAAYNEMGSLADSNIILPA >gi|316920349|gb|ADCU01000001.1| GENE 126 142336 - 142881 504 181 aa, chain + ## HITS:1 COG:YPO2759 KEGG:ns NR:ns ## COG: YPO2759 COG3539 # Protein_GI_number: 16122963 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Yersinia pestis # 5 181 5 176 176 82 35.0 3e-16 MKLNKLAVALVMTMGIASAAANAAGTVGGNGTVKFHGFIVDAACSIAPGNSEQTVDLGSI AIKALKDGAKSTPANFKIVLDNCDVTGGAAPKASITFNGSNAGGSSNLLGITSSTASGVG VGIADANGKDFELGKETEVKTLISGTNELDFTAYVQATGASGSSITAGEFNSQTDFVISY N >gi|316920349|gb|ADCU01000001.1| GENE 127 143033 - 143560 415 175 aa, chain + ## HITS:1 COG:YPO2759 KEGG:ns NR:ns ## COG: YPO2759 COG3539 # Protein_GI_number: 16122963 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Yersinia pestis # 17 174 21 175 176 81 32.0 9e-16 MVVRTLCAFMVFFVTTAWAMGEQQGRVKMTGTLVATACSISSESLEQVIDLGSMPISELA KNGQGPEKEFVIKLENCELTSQDHLRPDFKSVHLTFDGTRDEIANLLSLQGEASGIGLVL KDEAGNIIVPGQNLPDIPLNVGSMVLNYKLAIQRNNHELRAGNYRAIVKFKVEYL >gi|316920349|gb|ADCU01000001.1| GENE 128 143746 - 146301 2053 851 aa, chain + ## HITS:1 COG:YPO0698 KEGG:ns NR:ns ## COG: YPO0698 COG3188 # Protein_GI_number: 16121019 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Yersinia pestis # 6 823 4 822 826 926 54.0 0 MSTFHINKISLAMALAVAGTSLSSEAVEFNTDMLDTADKANIDFSRFSKANYILPGLYQL ALRVNDQSVGEYPFNFYPRENEPDSSEACLSPELVSELGLKPAALNKVTYWHQGECADFS QLQGTTVRGDLSNSSLQLSIPQAWIEYSDPNWVPSSRWDEGIPGLLLDYNLNASATRPNT GGDSQNASISGTVGANAGPWRLRGDYQGSYSRTSGSDQGSQHNMDWSRVYMYRALPQLRS TLSMGENYLSSSIFDSWRYTGLSLSSDDRMLPPALRGYAPEVSGIAKTNAKVVVSQQGRV LYETTVPSGPFRIQDLSSAVTGKLDVKVEEQDGTVQTFQVDTATIPYLTRPGMVRYKLAM GRPSTYEHHLQGPTFATGEFSWGIANSWSLYGGSILAGDYNAASIGIGRDLFLLGAVSAD VTQSFASVPGEAKRQGKSWRLSYSKRFDEYDSEVTFAGYRFSERDYMSMGEYLDARYHEQ NSGHDKELYTVTANKNFSDVGLSFYFTYSHQTYWDQPTDDRYSLSGSTFMNLWALKNVSL NISATRSKINQRDDDAVFVSLSIPMGSSASVSYDGQYNNSRYSQNVSYYDRIDNNNNYRV STGLSSGGDESTRGQFNGYYSHRGDFANMSANAAYSQGNYSSAGMTMQGGATITAKGAAL HSGGISGGTRLMVDTEGVGGVPINGGRVHTNGYGIGVITDMNSYYRNSTSIDLTKMADDV DSSRSVVDSALTEGAIGYRKFGVVKGAKALAVLALADGSHPPFGASVKNSEGRELAIVGD GGMAWLTGLQGGESLDVLWDGAKQCTVVIPKTLSQQEQLLLPCHPESQTQIPAAVKNVPA ANPIDNIHEEQ >gi|316920349|gb|ADCU01000001.1| GENE 129 146306 - 147028 472 240 aa, chain + ## HITS:1 COG:YPO0699 KEGG:ns NR:ns ## COG: YPO0699 COG3121 # Protein_GI_number: 16121020 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Yersinia pestis # 1 235 1 235 239 266 55.0 3e-71 MKLKQTLSLSFVLLLSAQAAQAAIALDRTRAIFEGTQKSISLNIRNDNTQLPYLAQSWLE DINGKKISDPLVVVPPVQRVEPGSRSQIRINATGGIAKLPQDRETAFYFNVREIPPRSSK QNVMQIALQTKIKLFYRPAAIAIDPDTVWQDQIVLTKTSDGYQIQNPTPYYVTVIGISGQ PKGESAKDFRPVMVAPKSTQKAVTPAYSTPYVTYINDFGGRPELKFTCSGNECRATTNRS >gi|316920349|gb|ADCU01000001.1| GENE 130 147040 - 147663 454 207 aa, chain + ## HITS:1 COG:no KEGG:ETA_04010 NR:ns ## KEGG: ETA_04010 # Name: mrfE # Def: adaptor/initiator (mannose-resistance fimbriae), MrfE protein # Organism: E.tasmaniensis # Pathway: not_defined # 19 207 18 205 205 110 34.0 5e-23 MRTSYLRLTRTTLWICLLSGAVTFFDLQLAKAKSIDGWDVYGMHGEMTVQGSLTEPACVL AMESKDQSIDLGITSRVSLNRIGNRTDPVTVHFQLKDCGVVGNSPRDDSHGGNITFLPGQ LVSYVTVSGVASDSNKYLMKVSGSAGGVGLRLEDYKHRQLIPGEHSEPLIMSQGNTDLVM YAMLERIPEELIEGEYHTTINLNLTYQ >gi|316920349|gb|ADCU01000001.1| GENE 131 147713 - 148243 327 176 aa, chain + ## HITS:1 COG:ECs3217 KEGG:ns NR:ns ## COG: ECs3217 COG3539 # Protein_GI_number: 15832471 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 8 175 21 181 182 81 30.0 7e-16 MRLLALLGMALFSSSSLAAVDINFHGEVVSEPCEVDINADGQDVDFGTIAIKTFYAEGRS ESKPFSINLKNCDISISKTVLVSFTGTEDGEQTGYLSLQSAKVKGLAVGLESVSGDVQSP TSFIPLNNGSAKYNLNQGANSLKFSAFIKASSKSIADHSITEGDFSTTAEFHLEYP >gi|316920349|gb|ADCU01000001.1| GENE 132 148290 - 150017 960 575 aa, chain + ## HITS:1 COG:VC0393 KEGG:ns NR:ns ## COG: VC0393 COG3307 # Protein_GI_number: 15640420 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Vibrio cholerae # 4 560 23 570 597 197 28.0 3e-50 MQAINRTAIFIILLIYLAIGMHIFIPGMGGSGLRMPGNIVAWAFIALSALAYWLLNSHRN ITITTTFRLIFTGVVFLLIPLLYTPEKWLRDALFQMAGVMAGLAFYFTLLQCRFSEFWRV RIINLLLFAVLLQGGIGFIQLSLLSPDSGLMALSAEGARPTGVFRQVNVMASFMATGIAS ALYLLYLPQSSDASQQNAPLVPRLLRLQQLAALVLLPAMLVLLQSRAGYIGAVIVIVANF ALRWREFPRQTIVFAGLIILGLLTGYSLMMAADLVTPVSHEGSNLERWKILQITLAMIAT HPLSGWGYGSFEYSFAHFALGMTPPIAGMGVITHPHNELLFGWVEGGISALLGYVLIAVA FIRLMFLAWRQVNKHCFALWLLMMPIAIHSQLEYPFYMSTAHWLIFLLLLSLTDVAVSNI TVVSKPKMNGVIRMAMCLAALAGLTLMLPTLQTQILLTKAEQLQMKQAIIHFPLLEQQLW QPWLLRERVDYDRQVSQLLQYNQSRAPQILQHYLDWSQVYLSRHVDANVYASRIAILRFN RDVDEAEKLRQEASQIFNRDIRFQLPAVIAVQESK >gi|316920349|gb|ADCU01000001.1| GENE 133 150017 - 150673 346 218 aa, chain + ## HITS:1 COG:no KEGG:CKO_02620 NR:ns ## KEGG: CKO_02620 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 11 214 52 255 262 138 36.0 1e-31 MFTHYPSPVGIKLQPIVELKTGLVIGYEVLSHFSDAVDSESYFRQVPSNIVFSMFNHQVE RVTNSSSDVHYFINLPVRDLSRSDLGELIQISPDKKVVVELQDPENLVGLTCAEQQTLVK NLNALHEQNIAVWLDDIEGSMLSVVRELNFRFDGIKIDKHEFWRSQSMPSVLNQLVKNCY QISPNVLIEGIETLQHREIAACSGASHLQGYLWPETII >gi|316920349|gb|ADCU01000001.1| GENE 134 150696 - 151397 251 233 aa, chain + ## HITS:1 COG:YPO2593 KEGG:ns NR:ns ## COG: YPO2593 COG2771 # Protein_GI_number: 16122806 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Yersinia pestis # 1 190 6 201 205 58 26.0 7e-09 MTRVLIDDENTFYRDGLWHFIKQHFALNALGPVELLESSEDNLNSSDIIVKVFQNGAASV CHYELLHRKSNSLLIGVCTGEWKTSLARLPDCLKGVLFIKRNESLKSLSKKIILAWKNSF AGNEKVRHCHECQALYFSPQEEKVVRYICSGFSVARIAWILSLNIKTISSHKRSVMHKFN LNSDAELLALMKSYEDRLTYSSGRKRFFYMSPSARELNIRHRIVERLIHTVAI >gi|316920349|gb|ADCU01000001.1| GENE 135 152057 - 153058 581 333 aa, chain - ## HITS:1 COG:no KEGG:YpsIP31758_4104 NR:ns ## KEGG: YpsIP31758_4104 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis_IP31758 # Pathway: not_defined # 21 333 23 328 328 286 49.0 6e-76 MKYALPSKLHGKRLLPLAGLLLASFHASAFDCVESGTNVVDKPPIDIGELAIPANVPDKT KVWESNPITVTAFCDNNTKSNFKDYVTFYFNPKSKSLGQGLKLGVTYEGKDLEQDGQALQ VPNGGPVYKKGSGTPTSKTVTVTFRLYIRTDGTPPASGHYQGADEFVVFQLDGSSGINFR PDAKNLKYSLSGLTGARFLSCGAQIKLYPENQNLDFGDIDRTELSSGNVLSKSFTVKAVK EGGCLEDFSLTSQFATTETLLDSTNINLNNGVKLGFLDQDNKAVEFNKYTNFGSMKGITE ISKNYTANISMIPGQTIKAGPFVATTIVKVNYY >gi|316920349|gb|ADCU01000001.1| GENE 136 153069 - 153605 253 178 aa, chain - ## HITS:1 COG:STM0199 KEGG:ns NR:ns ## COG: STM0199 COG3539 # Protein_GI_number: 16763589 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 27 177 6 157 158 63 30.0 3e-10 MNMRLRNITLLVFLFSSSLFGSAFAALAPISGGRSDDESKSTLYIRGNIYEPAACKINND KNLDIDFKRIALNKIDGIAYANITPIDIVCSITTGATVQLEFTGTSSGKSHYLTTSLDNL ALALSDDSTGNNIELNKFFTIQKTQTIQLRAVPTKISDAVELNEGTFSATSTLITRYL >gi|316920349|gb|ADCU01000001.1| GENE 137 153943 - 154824 650 293 aa, chain - ## HITS:1 COG:VC2324 KEGG:ns NR:ns ## COG: VC2324 COG0583 # Protein_GI_number: 15642322 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Vibrio cholerae # 2 290 4 294 304 191 37.0 1e-48 MNITFKQLSVFVTIAHHGSMTLAADALFMTKGAISQTLAELENQLGVRLFDRQHARLFIN HEGRKLLPVADELLARMQGVETLFGEKSQDTHLRLGCTKTIGSYLLPDMLKGFAKGNGWM PQSVIANTQEISKMVDHFEIDVALLEGPATEPNLISEPWLNDEMVVIAGRDHALAKEKIV PYSRLSQERWLLREQGSSSRAFFDNQLALHLDNPQVALSLNAFDAILSCVAHNLGITFIS KRVLQQPFYAGHFVQLHTEQRFMRKLTLCYHKNKFISPTLQSWLSFSHSWTHV >gi|316920349|gb|ADCU01000001.1| GENE 138 154882 - 155910 778 342 aa, chain + ## HITS:1 COG:VC2323 KEGG:ns NR:ns ## COG: VC2323 COG1275 # Protein_GI_number: 15642321 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Vibrio cholerae # 18 328 1 312 322 321 61.0 1e-87 MDIVCVAEEMKKNRGDNVLRHLHHRVRGLPTPVAGLALGIASLGWCLENALPLHGVGQNA GALIAAVLLCAMAARFVLHPDTLTQDLKHPVVGSIVPTFAMAAMVVSKALGHFLPLAGQV LWLGAVVVHLIALAFFIYHRAQEPNLHHMVPSWFVPPVGIIVADVTCPSDAYTEFALILL AIGMVSYLIMLPMMIYRFMFRNEVPDAAKPTIAILAAPASLSLAGYLTVVKEPSMLICAV LLGIALLMTLVIYCAFFRLMRLPFSPGYAAFTFPMAIGATALYKMANLVSSYPHAAEYAR QLHMMATAEAAIATLVIGYVSVRFIHNYLLPSRLNIHQGAVK >gi|316920349|gb|ADCU01000001.1| GENE 139 156163 - 156471 168 102 aa, chain + ## HITS:1 COG:STM2797 KEGG:ns NR:ns ## COG: STM2797 COG0640 # Protein_GI_number: 16766108 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 7 101 4 98 99 104 60.0 4e-23 MDSPFNLAELQQRASLASSLLKSMSNESRLLILCILLGAERTGAGELAAAVGLSPSATSQ HLARMREEGLVDSERVGTSVLYSIKNPAVERVIGVLKDIYCS >gi|316920349|gb|ADCU01000001.1| GENE 140 156481 - 157014 492 177 aa, chain + ## HITS:1 COG:ygaP KEGG:ns NR:ns ## COG: ygaP COG0607 # Protein_GI_number: 16130582 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 6 175 5 173 174 210 60.0 1e-54 MSSAITISPQMASKMLGEGALLVDIRDPQEYAREHIFQAQLYPLGELEKGMKISGVTPTS KVIFHCLSGMRSSKNAERLVQAAAPAQVYLMEGGINAWKTAGLDVEIDKRQPLPLMRQVQ ISAGTLVLLGVILGYLVNSGFFLLSGFVGAGLLFAGITGYCGMARLLIKMPWNKKPT >gi|316920349|gb|ADCU01000001.1| GENE 141 157069 - 157404 236 111 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSDKTLTILHSNMLRLHQVINTSTENGLPDNLLDVLALGFNLLNMSNNELIQQQQARQTL SYNSVSLVIQQCSALLWIVLEYASPQMEQSSVDELAEIYLHTHYLAKSLSC >gi|316920349|gb|ADCU01000001.1| GENE 142 157667 - 158860 583 397 aa, chain - ## HITS:1 COG:ECs0925 KEGG:ns NR:ns ## COG: ECs0925 COG0477 # Protein_GI_number: 15830179 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 5 379 9 378 402 385 59.0 1e-107 MPSLSLKHRSLALFIFFFLPGVSMASWVTRTPAIRDKLGASTAEMGLVLFGLSIGSMAGI LSSGYLVQRFSTKPVIAAGTSLVIAGILLVALGAFCSSALTVSAGLCLFGAGMGSAEIAI NVEGADVERLSHRPLLPMLHGCFSLGTLVGAGIGNGLTSVNFPIQWHLLLIGVICIPATL WALKSVPQGNGLRPSVTDTADNNKSTGVTTNVWKDRRLILIGLIVLAMALAEGSANDWLP LLMVDGHGFSPTSGSLIYTGFALGMTVGRFCGGYFLRRFGRVNVVRGSAIFGVIGLGLII FAENTFLVSASVLFWGIGASLGFPLTLSAASDTGPNPAARVSAVATTGYIAFLVGPPMLG FLGEHLGLRSAMIVVLALVTFAIWLAPAVGEPPKSNA >gi|316920349|gb|ADCU01000001.1| GENE 143 159094 - 159459 236 121 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSEIANEKVKIRADGSTTYRFNTDYTGRISIKTKIDIGDKSYFLNRDISITYEREGADYY KVTPTKVLRSLADNAPDHFIENSFMIKQAYEYALTIKKVNNNTYLLGGSFSPMTICVVKP N >gi|316920349|gb|ADCU01000001.1| GENE 144 159585 - 160457 21 290 aa, chain - ## HITS:1 COG:STM3759 KEGG:ns NR:ns ## COG: STM3759 COG3710 # Protein_GI_number: 16767043 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Salmonella typhimurium LT2 # 3 107 33 138 285 72 36.0 7e-13 MSIYIVDDLVTYNSEDGILRSLQNDENQLALTTTTARLFNLLLENYGCVVSREELFEKIW ENHGQRSSNAGLNQYIRTLRKCLYEFGVAENSIITIPKVGFKLNPSIIQRIEDADDSYQD KHEKESQSEKSDAVPIKKHQTNHEEKYETKNIQATPNDKNGHDTQKRCVFYSLLILFIGN VLLFVFSFSNQIKSETVHSYLLTTIDSCRVYTLHPNSEQAIPIKKKIFETAITRSKLSCI TGTEFYTYIDDSLVFGRIGDIFIARCTLRDASTNQFIACDSSYYSPWDTK >gi|316920349|gb|ADCU01000001.1| GENE 145 160929 - 161504 133 191 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVNVVTQGLDNYAKKGIYAVVEGIYGEDSIKKSEIDDLDDPCEDVTLYFRTKFEGLSHCT CHLTNNNVAVVTVLSDKSDVGHLGNEATFTISDSFTDIENKIKKVMNLHKKIMNEARPSQ CLYCKMLKVLTPEEKKVVLLMNKGLSSVMIATLLNKNIKTVSSYKRSIMRKIGVRSNVQL YRYLSTISVDH >gi|316920349|gb|ADCU01000001.1| GENE 146 161718 - 168677 5558 2319 aa, chain + ## HITS:1 COG:Z0402_2 KEGG:ns NR:ns ## COG: Z0402_2 COG3468 # Protein_GI_number: 15800037 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 EDL933 # 1870 2319 6 478 478 538 63.0 1e-152 MNKIFKVIWNHSLQCFVVVSELARGKLKTDSTIKMNENAPKNQFKISLLSTSLLMAISGY AQAADITVHDFKPTDPFEEVIVGSSNLTGSFAGIQKGESGSKWTTLGQAKADGLITGDSA QWVDHDIFRIGSQTKSINYIDPVTGNTVTMKVYDNNDIQTEPAADFRITISTPVGKDGQY VDRNFYQIGSGASLDVNVGKTTGNWVGAAENQFNVILKSSSKTKNNSSAFHVTDGGQLNY LSKTVVQLGNNDNNIRDSSNPVAWMTTADFVGSFDSVIGPQNITNIDEFKAYNDALIKAL QDGKIQLTEAEYSAELNKARDQTLHGIVVNTDNIASDDAVRATVNRDVVSYLHAEGAGSN INIGADANIQLVGSDATVVNLENGAKLTNNGTLGTAGNTFRGAYVIAARSTSFVENNGVI DAGTNPEMADFFQGGAAGVANGTHTAILANGASVVNNNNTGVINVAARGNYYGNTGVLLG SSATLNNYGAINIAASNEASSILGDGSNIGVVTQQNTTFNNEGTLYIGRMAQRTPSDSTD DLAIKQSSIGVHLYGNGTYNGKTNSEIIIGSKVQNATAIDVGGSATLNQQGTIQLNGAVS GESVSSNTGILVREGTNANKVINSGTIDMNGLNSTGIKVLANGQITNSGTINVNGGLDPV THYANYGIYAQGEKALAILSGKVNLTGDGAIGVHARDKGEIDVTQNGVVTFNGGTNQTGY YIFGAGSKIKNDASSVQDVSTQDSTLYRVDGGASFDGSGNSAAQLNASGDNATIIRTTGA GSQFSSGKLALSVTGEGATGIRIEGGATGEITADAVIVKVAGKDTTAGIVDGNYYELDGS ENAAKKGNSVLTSYANLETANTADGAFGYIARNGGKLIHEGSIDFTEANSTGVLVDGGIL DNRSTIVVNGVAVNIQGASSEVTNTGTVTATDGTAAYLVGKDATLALNGNGITQAAGSAH GILLDTGAKGLTVDGATITMSDTGSGSAIENKADIVGIQLKDTTINVGSGIGVHTGASMA QTNSGTINVTGSGTGILFENIDGSQTDQTLDMSDSKDLVINVQQAGGKGIVTNASSDLKT GVSVNVLDAAGGAALIVKGSTQKVEQSGKLTSKSTTDAVVDINNGSVSEFVNRGDILALN ASQKAVETTSGSGVQFTNANGGNIIGQVNLLTGNNVVTLESGSTGTDFTTGSGSDLFLLK DVQESETNLFTSLNGGQGEDVLKLDNSSYVLNRADAITGMEHIDLTNGSTFTLDNVLLAL GDSRDDSVSTGYSIDSTSTLAVKNSASVAFNSHLSGNGLMTVDTTGNSFEFTSNNAADGF AGTFAMGNTRFELDGLNTQALTNATLRADNGSITHVGAGQQTIGGLAFNGGTVKFDGVTP GVTEAAGTIHTTDNMDLLGKGVVQVDAGSVSNDRPLPNTHVSLLEQDDTGSLIKLADSDA AVQGSGGNLELHDASGNVISDGVTLDIVQDGTTVAKGTYDYRLTSGENNDGLYVNYGLTQ VELLGSGNDALVLDANGKTGNAADLSAKVTGSGDLALDSQKGETVSLSNMDNDYTGVTDV RSGNLLMLNDNVLGLTSELKLALDTVLDMNGHSQTVGKLATDAGSLLNINGGKLTLSHGG ISSGELAGSGELVVAADTLTVNGANANLSATTTIEQGALAELNNTLGLGIGDIVDKGELL LNKADGVLYNNISDNGAVALKDSHVVLAGDNSKFAGTFTIDSTSQLTAGSAQHLGTADIK DEGELVLNTQSDWALANNVTGSGSLIKQGSGSVTLNENVAYTGKTDIQQGGLILGNENAP MTLASQQVNIHEGAKLSGFGGVAGNIDNQGLLQIGSDTQTDGKTQTFTIGKDLVNSGTVL VGNNTGHATAGNQLLVKGDYTGNDGHIHFNTALGDDNSVTDKLVVTGDTSGKTGVSVSNA GGTGAQTLNGIELIHVDGASNGEFNQEGRIVAGAYDYTLARGKGDSSGNWYLTSKQNGEN PDPGPNPEPGENTERPEGGSYIANLAAANNLFVTRLHDRLGETQYIDALTGEQKVTSMWM RQVGGHNNFRDAAGQLKTQSNRYVMQMGGDIAQWSTDGLDRWHLGVMAGYGNNHSNTHSN ISGYSSKGSVDGYSTGIYGTWYANDAEKTGTYVDSWLQYSWFNNHVNGEQIASESYKSRG ITASVEVGQTIKLNEFKGSLGSTNTWYVQPQAQAVWMDVKAKNHTESNGTRVSSDGDGNL MTRLGVRTYLKGHHAVDEGKGREFQPFIEANWIHNTRDFTATMNGVAVKQDGARNLGEVK VGVEGQLNPRLNLWGNIGVQVGDKGYNDSAAMIGVKYNF >gi|316920349|gb|ADCU01000001.1| GENE 147 169869 - 172811 1984 980 aa, chain + ## HITS:1 COG:YPO3028 KEGG:ns NR:ns ## COG: YPO3028 COG3468 # Protein_GI_number: 16123205 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 463 980 281 759 759 263 33.0 1e-69 MRLTISHALLPVIYLVALPLNAADSIPESFQPKKESTVPTDLKTNSSYQDSWDYTQEKWG QKYPNLQIKDNKYLADRDIVLLNPAFSKQVVTLINHSYSVGNTLNSVQLNIGDGINEANG SEALNTLVKGEYVNSRGNIETGVLSVNSNGKAFNTVVDAYGSLSVSGDGEVYNSLIKTGG LQVLGTRAYAQANIIDGGVQQLSVTGNAVAEDNIVKNGGQQIIYAGTAKNSHIGDGSYQL ASGLAQDTVLYSGAFQEVYSGKGETHVADSNTQVLAGAFQQITSGISENAQVYGTQTVSG VDVTWKDGSWTSDEGSKIRINGQTAKNSTIYAGGKQRIQSGTADGTQVYGVQTISGQKGG WVDGKWVDADGYTGGIRANATNTTVYAGGLQQIAWYGEADQNIIDGGTQQVDELGHISNT TIQNGGASTIAYGAYSSGDLIVKDGSLSMQAGSDHAWTENLGKGAYAANVDLQSDNAYLY IQHNDAAPESVVTIKQLTNNGVVNFGAKNGSDSGRFSRLDLNTLSGSGTFIMNTNLAGEE GDFLNISDSVSGNFHVLVRDSGYELTGSGANPYHLIYANGSSADTFAMTNGSVDLGAYKY YLVHGDASDKDNWYLSPTAVKPNPEPDPDPTPDPDPKPDPDPTPDPGTDPGTDPQPEPEP TPEPTPEPTPNPGPGTKPELSESAKSVLAMANVTPTIWDAELSTLRSRLGEVRNNQQNDT GVWGKYISSRYRISTSNVGYNQDLNGVMFGGDRTIALDNAQLIVGGMASYTHSELEASKS NGKVDSYSVGAYITWLHDSGYYLDGVVKANRFRTENNPYFNGGRAHAHDNSFGAGFSLEA GRHISFDDYFVEPYLQAAFFRGERSEYKLDSGMKVKADAAKSVKGELGTTLGKNVTLANG ATIQPYMRLAVRHEFMKDNAVVINNTEHFTNDMSGTSGKYGLGITTRMNDRWAAYGEINY EMGHHIETPYSGQIGVRYSF >gi|316920349|gb|ADCU01000001.1| GENE 148 172882 - 173574 365 230 aa, chain - ## HITS:1 COG:PM1244 KEGG:ns NR:ns ## COG: PM1244 COG0235 # Protein_GI_number: 15603109 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Pasteurella multocida # 1 230 14 243 243 359 71.0 3e-99 MNTLKKKVLAANLSLPEHQLITFTWGNVSGIDREKGIMVIKPSGVEYANMSLDDMVVVDI QSGKIVEGNKKPSSDTDTHLALYHAFPDIGGIVHTHSRHATIWSQAGKDLMPLGTTHADY FYGAIPCTRPMHDDEIEKSYEHNTGSVIIETFRQRGISPNQIPAVLVNSHGPFAWGTNPA NAVHNAVVLEEIAYMNLFTQQLQPHLTAMQQTLLDKHFLRKHGANAYYGQ >gi|316920349|gb|ADCU01000001.1| GENE 149 173727 - 173861 86 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVKLGTNRASIDVVLMPVNARLLVLLWGLDEKRELICDYHPLIL >gi|316920349|gb|ADCU01000001.1| GENE 150 174018 - 174827 484 269 aa, chain + ## HITS:1 COG:YPO3327 KEGG:ns NR:ns ## COG: YPO3327 COG1349 # Protein_GI_number: 16123480 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Yersinia pestis # 1 269 1 269 269 389 71.0 1e-108 MLQAERYKMICAHVQKLGAVRVTELSQLFQVSQETIRRDLTKLEQNKKLTRSFGGAVSLE SPDVMSAALEDKIWPENSVDRAESFRKRTEENPDIKTKIAKAALQFIHPGDCILMDNSST CWFLARQIPDIDITVVTNSLRIIQALACRDKVRIIGIGGEYSERHDDFHGPVAESAIRNF QINSFFFSCQGLNLENGLRDGSEINARLKQVMLQVSAQKILMVDSSKFEQFAFSKICMLN EIDIMVTNNCIDERYRSLHPQLNVVEVDK >gi|316920349|gb|ADCU01000001.1| GENE 151 174973 - 175977 1061 334 aa, chain + ## HITS:1 COG:YPO3328 KEGG:ns NR:ns ## COG: YPO3328 COG1879 # Protein_GI_number: 16123481 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 1 334 34 367 367 595 90.0 1e-170 MKKLILSCLITTVLASTAAWAEQPATTQKANKPFTMGVVVKVGGIPWFNVMEQGIKEEGK ALGVDAWQVGPTTADPAEQVRAIEDLIAKKVDVIGVVPNDAKVLEPVLKRAQEAGIKVIT HESPDQANADWDFELLNTQTMGANHMKDMAKCMGEEGKYAMFVGSLTVPLVNDWADAAIA YQKEHYPKMTLVEDRFGVAESVDDSMRTTNDLMSKYKDLKGIMSFGSQGPIGAGRAIDKR KKNDAICVFGTFTPGQGIKLLEKGAIDGGYISNPMTAGKVFVQVATAMMNGEPIKDGVKI GDMGEIKVQNNTILSDNPEKLDLENTKRLVKLGL >gi|316920349|gb|ADCU01000001.1| GENE 152 176042 - 177556 852 504 aa, chain + ## HITS:1 COG:YPO3330 KEGG:ns NR:ns ## COG: YPO3330 COG1129 # Protein_GI_number: 16123483 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Yersinia pestis # 1 504 1 504 504 768 78.0 0 MPHTTEHNAGVPLVTLKSLTKSFGGHQALKNIDLTLNKGEVHCLAGANGCGKSTLIKTLS GVYTPDTGSEIIIDDKSWSRLSPDKARELGIQVIYQDLSLFPNLTVAENIAFEYNLKGYL RWHKKAYLKTVSEKIIQELNFNLDVDALVQHLPIAQRQQVAICRALVAEARLVIMDEPTA SLTRTEVNQLLRTVNYLRDKNITVVFVSHRLDEVKEISDRITVIRDGEVVGTWAADLLSP GRITELMTGRTIIHQKKLPNSVEGKVILELNKLSRKGQFEDISLRLHQGEVLGLCGLLGS GRTELALSLFGVTHPDSGDIYLDGKKVMIKDNTQAVEMGIAYVSEDRLTLGAVLQQSVSD NMVLSILNRLKTPWQCIDEKRQETLVKEWIQDLDIKVTNPDNPLSTLSGGNQQKVVLAKW ILTRPKVLILDAPTVGVDIGAKDSIYQLIQRLSGVGISVLLITDEAPEAYYNCDRIFHMQ RGKIINELRPSLYTEQQLAEVING >gi|316920349|gb|ADCU01000001.1| GENE 153 177549 - 178541 825 330 aa, chain + ## HITS:1 COG:YPO3331 KEGG:ns NR:ns ## COG: YPO3331 COG1172 # Protein_GI_number: 16123484 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 10 330 9 329 329 442 85.0 1e-124 MAKGIQLRLPRSVEGWLGWVIVLMLVLFSLMSDEFLSIQNLLDLTESYAVTGIFALGLFV VLVTGGIDISFAAVASVVQYVVASLLLNGMIENPLLCLGLAIGLGVILGLINAILIYYLN VVSIIITISMQSLLFGMLMWLTNGHSIYDLPDWWITQRSFFSFGFEGEVYQIGLPLAVML GMACFTWIVMNKTHIGRQLYAVGGSPESARRIGIRVSLIYLFAYGYLGAAAAIGGMLQAY RMSEVVPNALVGGELEVLAAAVLGGASLSGGRGSVIGTLMGVFLIGILKNGLNLIGVSSY FVNIVIGVVIVSAICVTHYKKRKETDVGFV >gi|316920349|gb|ADCU01000001.1| GENE 154 178555 - 179601 834 348 aa, chain + ## HITS:1 COG:YPO3332 KEGG:ns NR:ns ## COG: YPO3332 COG1172 # Protein_GI_number: 16123485 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 1 335 1 335 345 471 84.0 1e-133 MKKQAFLPIDGTSSGLLAICFFAVVAFSLAMPGRFFTENTFLSIAFQLPELGLLTFAMFV PMLSGGLNLAIIGTANLTSLFMAWLLIQLVPADASTGMQLWWLLLAMLGAMLIAIAIGAI TGMIIARVGAHPILVTLGSMTIISGIGIYLTKGAALSGMPPIVRSIGSEVIYGIPVPMVI FIAATLMLALFLGKTRTGKVIYMCGSNINATWFSGIRTDRVLIAIYAISSLLCVLAGLIM LARFNSARMGYGDSYLLLTVLAIVLGGTDPFGGVGKVSHVFCALLVLQVIATGLSLLGLS LHFNLAVWGITLIAALAFKFFKQKWQAQRAMNNSRKVTQQPLATLEGK >gi|316920349|gb|ADCU01000001.1| GENE 155 179601 - 180482 506 293 aa, chain + ## HITS:1 COG:YPO3333 KEGG:ns NR:ns ## COG: YPO3333 COG3623 # Protein_GI_number: 16123486 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Yersinia pestis # 1 287 1 287 293 468 80.0 1e-132 MRTHPLGIYEKALPRNTSWVEKLALAKSCGFDFVEMSVDESEERRARLDWPLAERMEIIN AIQKTGVRIPTMCLSAHRRFPFGSHDSDTRQQARIIMQKALRLAQDLGVRTIQLAGYDVY YEPQNDETIAWFEDAMAWVAEQAAAAQVMCAVEIMDTPFINSISKWKVLDKKINSPWFTV YPDVGNLTAWGNELESELVKGIDRISAIHLKDTFPVTRDSPGQFRDVPFGDGCVDFVNLF KILRRLNYRGTFLIEMWTEKSTEPLLEIIHARQWIENKMQAAGWFDERSPVAG >gi|316920349|gb|ADCU01000001.1| GENE 156 180493 - 181974 761 493 aa, chain + ## HITS:1 COG:YPO3334 KEGG:ns NR:ns ## COG: YPO3334 COG1070 # Protein_GI_number: 16123487 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Yersinia pestis # 1 490 1 496 498 706 69.0 0 MSHYFMGIDLGGTVTKAGIYTAEGREVTVAAQTLPLLSPLPGFCERNMADLWTATCEVIR RALVESHLSAEHINGISFSSHGKGLYLVDKSGAPVRNGIVSSDSRAQPLVTAWKAQGIDR QAYPHSFQQLWPSHPAALLRWLKLNEPESYARIGYVLMAHDYIRYCLTQEFTCEETNISG SQLFNLQHNEFDPALFELFGIEEMTNCMPKVIGSAELAGVVTTDAAALCGLKAGTPVFGG VFDVVGAAITSGVYDSTQLSAVAGTWSIATRIFDNIIPDEYPYVWGKFSIPGHYFAHEGS PTSASNLTWFIHHFFPELLDDHDKLNQWAVRGYEKLDSILFFPWLYGSNYCDSLSGGFLG LGGHHDAADMVYAIYQGIVFSHLLHQDKLLQLSDGTRTIRFTGGPTHSRIWMQMFCDASN LPLEIVDVEQSGCRAAAICAAVGAGDYAGFEQAIKATLPPLIRLEPDAVKHHMLRSRFER FKRVADALNSAES >gi|316920349|gb|ADCU01000001.1| GENE 157 182577 - 183152 341 191 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02708 NR:ns ## KEGG: ACICU_02708 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 68 170 17 120 129 64 37.0 2e-09 MDSVMYEERFERWMKVSIGLARFDPFVTSLVQSLGQMDANLCETDVNLVEKYKQGGNANE DYALIQGHLTHLYLWIFGSDEVIRTLTQSIKENKSDDPVEVLERFQDAKKRFARLRIPLA KFEAAKAYNKTDFKIAYSGFAYDIGIAWQVSDDVVISRQELSDLFLETLEFTRVQKLRRS LANDAPSRHLE >gi|316920349|gb|ADCU01000001.1| GENE 158 183199 - 183474 183 91 aa, chain - ## HITS:1 COG:no KEGG:VIBHAR_p08261 NR:ns ## KEGG: VIBHAR_p08261 # Name: not_defined # Def: hypothetical protein # Organism: V.harveyi # Pathway: not_defined # 1 87 1 86 86 70 47.0 2e-11 MTTCQAPHRYDTMFAALPEDQSYPFRHKCAGCAYELGFQAGESNQEPSAAMAIVSILKSQ AAEVRHRSPRVAYYQGYTDGLNEYYKQNPRG >gi|316920349|gb|ADCU01000001.1| GENE 159 184497 - 185153 89 218 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDKVNTVLVLLITLSLALIALFTGTGSVSDTIAIGGSGVSFQAPKAVPFILTVVWLLLWQ RFMVLSLHENKPEIDRLIQNKLNTSGFVHKAFSAKKAGFTGAYGVNKWAWADPKIPQAAA GNYVHYERGLLARRFKFSYFGNDSTGGGMFVHFGPKASNIKNGTLTPLNLGYWKCLLFEV KFLIIRLFDTPSVGQHYIPHVVAWATALTILIMTIHQS >gi|316920349|gb|ADCU01000001.1| GENE 160 185261 - 186301 425 346 aa, chain - ## HITS:1 COG:no KEGG:PP_3708 NR:ns ## KEGG: PP_3708 # Name: not_defined # Def: hypothetical protein # Organism: P.putida # Pathway: not_defined # 1 346 1 343 345 331 46.0 3e-89 MSNAPTQELDAEKLYENARVSIQLGIEDFQMSQRNVNDGGNPARALSSVRNLFAGMMLLF KYKLAKSVDTPEDAYRLIHIPPRDILPTPDGSGGIQWRPEGKFQKNKTIDVSDIKARFNT FEVYVDWDTIAELHNCRNHLEHLHPQNTHGELAGFVANLFPVLTNFINDELEKSPPEVLG SSWEIMLAHQTFYNSQLAECEESWLDVEVPKGMQEYLPTCTCSECGSRLLKASPDSIEQG YTVQSNEDDFEYCCISCGEHAPITPLLMDSFEHEFFFWPPDGDEPTYEECYNCNHDTFVI AEGNCRWCDTDLDYKNCKFCEQTLQQDDQANEGLCGNCSHRFYKDD >gi|316920349|gb|ADCU01000001.1| GENE 161 186493 - 187599 89 368 aa, chain - ## HITS:1 COG:STM2739 KEGG:ns NR:ns ## COG: STM2739 COG0582 # Protein_GI_number: 16766051 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Salmonella typhimurium LT2 # 1 340 1 340 341 573 77.0 1e-163 MTVRKQSSGKWLCECYPNGRDGKRVRKQFATKGEAVAFENFTMDEASNKPWMGEKADRRK LSEIIKLWDSLYGQTLADPKRMNAKLKIICDGVGDPLAIEFSAADFSVYREKRLKGEIIT PEGVLLAKVKPRTVNLEQLNLSAVFSTLKKLGHWPAPNPLTGFPMFKLHESELAFLDNLE IKRLLDSCSESTNPHLLTIAKICLSTGARWSEAETLEGHQVSKYRISFIKTKGKKNRTVP ITQELYEELPKNRGRLFTPCRKAFERAVKRAGITLPDGQCTHVLRHTFASHFMMNGGNIL VLRDVLGHADIRMTMIYAHFAPDHLEDATTKNPLANLNWQPRSGDNLAAGMINGYEKALT KTNYVHDK >gi|316920349|gb|ADCU01000001.1| GENE 162 187601 - 187867 224 88 aa, chain - ## HITS:1 COG:no KEGG:XBJ1_0984 NR:ns ## KEGG: XBJ1_0984 # Name: not_defined # Def: repressor protein CI # Organism: X.bovienii # Pathway: not_defined # 1 82 105 189 195 90 51.0 2e-17 MFDKVFLPNDMKDPYIIRSDSATYFVDKAATDHIDGRWLVEIEGKHSIRELAFIPVKRVK VLGGGIPFDCGVDDIKIIARVVGIFSKE >gi|316920349|gb|ADCU01000001.1| GENE 163 188322 - 188582 270 86 aa, chain + ## HITS:1 COG:no KEGG:Ent638_3512 NR:ns ## KEGG: Ent638_3512 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 2 84 3 87 87 64 42.0 1e-09 MAETISINIPREWVYPEEFAQLEGMSVHTVYKWKEKGKLEIIPKSIAPGKSRAGGRIRIK YAKYKSQQMREILGHSNFTLNIAAVH >gi|316920349|gb|ADCU01000001.1| GENE 164 188615 - 189118 388 167 aa, chain + ## HITS:1 COG:no KEGG:SSPA2446 NR:ns ## KEGG: SSPA2446 # Name: not_defined # Def: putative phage gene # Organism: S.enterica_Paratyphi_AKU12601 # Pathway: not_defined # 1 167 10 176 176 203 65.0 2e-51 MFDYQTSKHAHFDAACRAFSQGHNLEQLAEEIGLRGQTLRNKLNPEQPHHLTVPEIIALT DFTEDARLLDGLLAQINCLPSVPRNEAKPANLPLCTLSATASVGEIAAQAVSQEPMTAAR RNAILDKANSAIRNLSLIVLSVEARIQSTPMMAAAVDAVNAVIPNVM >gi|316920349|gb|ADCU01000001.1| GENE 165 189131 - 189334 156 67 aa, chain + ## HITS:1 COG:no KEGG:YPTS_3593 NR:ns ## KEGG: YPTS_3593 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis_PB1 # Pathway: not_defined # 1 62 1 67 67 63 56.0 3e-09 MQVFIKLLKKQSPAPQLAADAHGWLELPDGRRWSPCVSEFRFNKPQQAKRRPWWFRLMGL RGNHGRP >gi|316920349|gb|ADCU01000001.1| GENE 166 189321 - 189701 260 126 aa, chain + ## HITS:1 COG:no KEGG:YPTS_3592 NR:ns ## KEGG: YPTS_3592 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis_PB1 # Pathway: not_defined # 2 107 3 113 124 79 36.0 4e-14 MADHKFWLSQIRRQLDPRFNRAKRVWQSLSAEQRGVLLHAAGLPPVLCRYSWEAIDAKDL VKLRRGIQRIKALIGRFDDLAKEDFCSTGAAENISPAPVGGVEMVIAPRLLWQAEQVIAA KETQQH >gi|316920349|gb|ADCU01000001.1| GENE 167 189711 - 190118 248 135 aa, chain + ## HITS:1 COG:no KEGG:ECL_02861 NR:ns ## KEGG: ECL_02861 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 135 1 133 133 134 48.0 1e-30 MRIVTVELEGLYQDLDSWRVPHNYVRFFISKCQIVKGRVSLGSFMFNDTEHMTNPRQWLA ANAAFWCRAYRESQQCADQAQALGAIQSVNAMAGMLGHGEVVTLIHSWWANTFELHQLPQ LNSKFSRCPDKTTIH >gi|316920349|gb|ADCU01000001.1| GENE 168 190198 - 190437 290 79 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0968 NR:ns ## KEGG: ECUMN_0968 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 4 78 2 76 77 70 60.0 2e-11 MPEHMKRQDLNRNNDTAQLTAMLNSARLEGEKHAADKCSMRLDKLAAEAANNGLSAAEII ALIREESASLDSKGGAAWN >gi|316920349|gb|ADCU01000001.1| GENE 169 190428 - 191243 399 271 aa, chain + ## HITS:1 COG:STM2730 KEGG:ns NR:ns ## COG: STM2730 COG0338 # Protein_GI_number: 16766042 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Salmonella typhimurium LT2 # 4 263 1 257 285 285 54.0 8e-77 MELIRTPLKWVGSKARIMETLRPHLPAGDRLVEPFAGSCAVMMNTDYESYLIADVNQDLI HMYVSMVGFTDRFLHTAENLFETRNTSESYYSLRLAFNSKSHDSADRAALFFYLNRHCFN GLCRYNQKGEFNVPFGKYKKPYFPEKEICAFVEKAKRAEFICGHYSETLSMVKSGDVVYC DPPYLTDTDNFTAYHTQGFTHLDHGRLSRKLRRLSARGIPVIASNSDLDMVRYLYSGFCI EPITAPRSVGAAAGSQKSAGELIIKSGVSYA >gi|316920349|gb|ADCU01000001.1| GENE 170 191236 - 191529 263 97 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKIINSHLAITVQEKTKNRPRRLVLETSHTHAGITSWGVLAIYDRKVMLLRDLVSECVG RFVDGNPQFNESDYLLLVEQLAGLYLEALRELNWTGA >gi|316920349|gb|ADCU01000001.1| GENE 171 191529 - 193589 1210 686 aa, chain + ## HITS:1 COG:no KEGG:YPTS_3589 NR:ns ## KEGG: YPTS_3589 # Name: not_defined # Def: replication gene A # Organism: Y.pseudotuberculosis_PB1 # Pathway: not_defined # 28 686 38 695 695 814 63.0 0 MLNVIDVQPEAYHTVNQWRCEQFAPGAPQDISMAERDLWHLDSADHEWRHSLLKDIPNYL ARYFVERYTKIYNSSEPHEARRRANTFLRTTVGENILPRLRLVADQYRQCSPQIAEATFP FYPQLKDLPTLNRDELRKLSADAADYIAQAFMAFTEEHCAEQAPDAAAMRQRTLSAFRYL GELTEQIGTMPPYWAAFINGRRSLPTQSAESGILRMMTADWWLVRLKRRRDLHREHLAIA VGQVQKAASAYVSRGGLHEWIEQKKRNRDFFKAFELEDKDTGQRVSMEDMVNGSSANPAI RRCELMVRMRGFEDLAKDMGCAGEFYTITAPSAYHAVHSRGGFVKQWNGSDPRTTQKYLC KVWARARAALKREEISVFGFRVAEPHHDGTPHWHMLLFMQPCHVEQVREILRKYAYEEDA HELNTPEAKKARFHAVPIEEEKGSATGYIAKYISKNIDGYALDGEKDDQTGESLKDMAKS VSAWASRWRIRQFQQIGGAPVTVWRELRRLPGDEQILPTMDMDNVRFAADNSNWYAYTEC QGGAFVKRRDLTVRLAYEITEQGNQYGEDVQRVTGVYSPVVLNSEVVTRVVKWAIVPKLA TASAEAGVSGGNAAPWSSVTNCTPKEWRRLSNELKSRGFSGSDNEINILLRGSRLQISEG RSLAWRNDRLIEVEANPEHQRWPGWN >gi|316920349|gb|ADCU01000001.1| GENE 172 193756 - 193920 95 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVTKNLCAGDDRVLALAWIAELTDDLLRQLDEREQEEKNLQNGGLVSGRGSGLQ >gi|316920349|gb|ADCU01000001.1| GENE 173 193894 - 194163 124 89 aa, chain - ## HITS:1 COG:no KEGG:YPK_0895 NR:ns ## KEGG: YPK_0895 # Name: not_defined # Def: transcriptional activator Ogr/delta # Organism: Y.pseudotuberculosis_YPIII # Pathway: not_defined # 1 84 1 84 88 145 84.0 6e-34 MRVLKVECPDCGAKAVIKKTNRKHREIADVYCACSDVECGHTFVLNLTFSHTISPSAKTG DKLLKSVVQGLNPKQRQYVLDLLQTAATA >gi|316920349|gb|ADCU01000001.1| GENE 174 194214 - 195185 781 323 aa, chain - ## HITS:1 COG:STM2723 KEGG:ns NR:ns ## COG: STM2723 COG5518 # Protein_GI_number: 16766036 # Func_class: R General function prediction only # Function: Bacteriophage capsid portal protein # Organism: Salmonella typhimurium LT2 # 31 297 55 326 346 179 35.0 4e-45 MSLLTLSKPEPILTTGTDYRDIWYDNDYDHYTLPIERLALAQLINLNGQHGGVLYARHNM IASDFLRGGLTHDEFRAAIFDYLTFGDIAILKVRNGWGDVIDLTPLPALYTRVRKSGEYV VLQDGEPLVYPAEDIIFIRQYDPQQQVYGLPDYIGGIHAALLNSEATIFRRRYYHNGAHT GGILYTTDSNMTDEVEEEIERQLSESKGIGNFSTILVNIPGGDEKGVQFIQMGDIGANDE FANVKNISAQDVLNAHRFPAGLAGQIPQNAGGLGDPEKARNTYRKDEVIPVQRRFRDAIS ADREIPEHLHLVFDADTTKAGAV >gi|316920349|gb|ADCU01000001.1| GENE 175 195242 - 197014 1271 590 aa, chain - ## HITS:1 COG:RSc1939 KEGG:ns NR:ns ## COG: RSc1939 COG5484 # Protein_GI_number: 17546658 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 11 488 21 494 506 358 42.0 1e-98 MAKYSPELIGVARALYLRRMTPKEIANELNLPNTRIIYYWAEKGQWSDLLNHESTEEAIE RRYQLLAGRDKKTDIELKEMEILIAHAVKLRAQSNKHKEKLAAAKGDSQFTAGADDDERP AKKKKYRKNDISSLTQEDFDTWADEHLFGYQKHLRLNIAQTVRNILKSRQIGATWYFAFE AFENAVLTGDPQIFLSASKAQAEVFRSYIVNIAQQYFGIDLTGNPIRLSNGAELRFLSTN KNTAQSYSGHLYCDEYFWVPNFTHLNEVASAMATHDKWRTTYFSTPSAKTHQAYPFWTGE EWKRGSKKRAKVKFPEFDELRDGGRECPDGQWRYIITMEDAIRGGFNLADIERLRNRYND STFAMLYMCVFVDSKDAVFSFEDLERCGVDRDIWQDFDIKLKRPFGDREVWAGYDPARSG DLSTFAVLAPPVLAVEKFRVLEIVNWHGMSFRWQANEIKKLFAKYNIRYLGIDVTGIGNA VFENIQHFAGRVAVPIRYSVKTKDELILKALDVISSNRIEWPKDHTEIPASFLAIRRTTT NSGNSMTFVADRSADTGHAEAAFAIAHALHNEPINYENRPQSRWRLKQAA >gi|316920349|gb|ADCU01000001.1| GENE 176 197180 - 198022 634 280 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0976 NR:ns ## KEGG: ECUMN_0976 # Name: not_defined # Def: putative capsid scaffolding protein from bacteriophage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 1 276 1 266 267 313 59.0 4e-84 MSQLRTDWLCVATEGDTVDGRKLERQWLIDAGDLYEPNLYAALIWPEHEKDYGNFGEVLA CMWQEGDDGLVRLYVQLRPNAYLLDANRRDQMLYMSVELTPDGNFRGTGRTYLEGLAVTD TPASVGTTRLRFSHRKNRLRPASGYYEFSINKAGKIKQGNNMKNWQSWFGIKPKHFEEQS NDDAPEDGDKLQVLANAVNDLEARITKLEGSQEQTDQAVEEVQADVETVKEVVDTEEFAL IRDNAKSIVSNFNKLDKKITKLPKRDIGDKSQRKEFKHLV >gi|316920349|gb|ADCU01000001.1| GENE 177 198089 - 199117 932 342 aa, chain + ## HITS:1 COG:no KEGG:Dd586_0744 NR:ns ## KEGG: Dd586_0744 # Name: not_defined # Def: phage major capsid protein, P2 family # Organism: D.dadantii_Ech586 # Pathway: not_defined # 1 341 1 342 343 547 78.0 1e-154 MQLNKRAEQWIHAFSSALAESHGVGDVSRYFSLTDPKETQLRSALLESVEFLSMITCADV DQLSGQVVSVGSSALYTGRKEGGRFSRTVGVDGNEYKLVKTDSCAALTWDLLSIWANAGD ENEFFQKVQAFSEQIFALDMLRIGFNGKSVAKTTDPVENPNGEDVNIGWHAKMMEFNGGA QIITDGVTLGEGGDYASLDAMASDLVNAKLPQQFRNDPRLVVLVGADLVAAEQYRLYQKA DRPTEKIAAQMLGSTIAGRPAVVPPFMPGKRMVVTPLKNLHIYTQRNTRQRKAEFVEDRT QYENKYLRNEGYAIEEPEIYAAFDESAVTIGKVTEPSEPAGE >gi|316920349|gb|ADCU01000001.1| GENE 178 199121 - 199819 514 232 aa, chain + ## HITS:1 COG:no KEGG:Dd586_0745 NR:ns ## KEGG: Dd586_0745 # Name: not_defined # Def: small terminase subunit # Organism: D.dadantii_Ech586 # Pathway: not_defined # 2 231 3 232 233 320 69.0 2e-86 MLSPAQRHNAKIKARQALEKCQVLDAEHSLHVQLAALESDVKRLRNLDTLRDRTIMKRNE LLPRWLPTAQAYLDSGEVYQNPILSHCVVWLFDVEEFDQALDWADVAIAQGQETPGNFRS KFPAFVADTMLAWAEMAASCGDGVEPYFSRTFTNVTQNWRLHEEITAKWFKFAGLLMLRD DEGKPRASALDDVEQLEKAGLMLAQAEGLYKNVGVGTMRKQISARIRALQKS >gi|316920349|gb|ADCU01000001.1| GENE 179 199914 - 200366 452 150 aa, chain + ## HITS:1 COG:no KEGG:SeHA_C3488 NR:ns ## KEGG: SeHA_C3488 # Name: not_defined # Def: phage head completion protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 150 18 167 167 217 69.0 9e-56 MFSGTPIDYQDAPLTNDGFWPDLSLKEFQQQRSIPPDIDGGTVAQALLTAAGEVNRDLRD VATKHGSEGYTQAQDVPGVAIDGINLLCGQYKKAVYARAKADLMGEFATIGRRESHPGQE SAETRNGLLAEASIVIRSIKGLKRVTVRKV >gi|316920349|gb|ADCU01000001.1| GENE 180 200363 - 200863 336 166 aa, chain + ## HITS:1 COG:no KEGG:ECL_02848 NR:ns ## KEGG: ECL_02848 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 2 165 4 167 168 208 62.0 6e-53 MSQLESLTQFFKDNVPPRAMLAFNSEMDEMQYIPAQKDLGLGQYRLAILRSTALFSWERF PYRQCDPRLLMALMTAWLSETDRSLFAENGIDDSSPEWDVSVDDQETATVVLTVPMVEEL CIVPDKKGAIPFDDQRWRLADPEIWTALTAQVFGTDEQGAPIGQAQ >gi|316920349|gb|ADCU01000001.1| GENE 181 200860 - 201570 594 236 aa, chain + ## HITS:1 COG:no KEGG:ECL_02847 NR:ns ## KEGG: ECL_02847 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 234 1 233 235 285 67.0 1e-75 MIAHGELNKAQFKTLRDELAKLDLPPKKRQRFLWRMAKYGVMAAAKRNVRNQQSPDGQKW AGRKTKRKGKMLRNMPKLLHIREMPQLQAVRLYLSGGGYRNGAKPVPAGVIGYSQQNGMS VTINRRQVAKNQAQGNQPATVKQAKRLRKLGYKVRHGKRWKKLGYKEIAALLTKAKAGAI IRSMEGKPAKTSWTVDVPARQFIGMSDDDFNKALARQLQAIGFGADVNAQNIRGSA >gi|316920349|gb|ADCU01000001.1| GENE 182 201567 - 202697 1095 376 aa, chain + ## HITS:1 COG:no KEGG:SSPA2435 NR:ns ## KEGG: SSPA2435 # Name: not_defined # Def: putative phage gene # Organism: S.enterica_Paratyphi_AKU12601 # Pathway: not_defined # 1 375 1 375 375 535 73.0 1e-150 MSWPQVTVNQVNQLQGETKEIERTVLYIGMGKTNAGKTVAVNTQSDFDALLGETDSPLKS NVKAAMLNAGQNWAGYVHVLAQDSEPEAWEDAVRAAQAVASVEGVVLVDDVSDKAPINAA SSLRSELIAKYGRWVWFALAVQAPQAEETWAEYLERLSALQQGIAASAVQLVPRLWGNEP GVLVGRLCNRAVTIADSPARVATGALLELGSDTLPVDGTGAAVDLATLQALEKQRYSVPM WYPDYDGMYWSDGRTLDAEGGDYQVIEYLRTVDKAARRIRLQAIAKIADRSLNSTPSSIA AHQAYFAKTLRAMAISVQINGVTFPGEVKSPQDGDVTIVWKSATAVEVYMVVRPYECPKS ITVSLLLDASIEGVSA >gi|316920349|gb|ADCU01000001.1| GENE 183 202694 - 203149 453 151 aa, chain + ## HITS:1 COG:no KEGG:ECL_02845 NR:ns ## KEGG: ECL_02845 # Name: not_defined # Def: putative tail tube protein # Organism: E.cloacae # Pathway: not_defined # 1 151 1 151 151 229 75.0 3e-59 MSQRLSGQSIDIRLDGELIHVEKVSLDITDNSAAASTQGVPDGWVAGDVAAEGEIEVSSK TFQQITAIARRAGSWRGIEPVDLMFYAKAGNEELKVEPFGCKLSLSNVLDGDPKGGSTLT HKIKYAVTSPNFVHINGIPYLEREATQNLIG >gi|316920349|gb|ADCU01000001.1| GENE 184 203159 - 203449 325 96 aa, chain + ## HITS:1 COG:no KEGG:XBJ1_1006 NR:ns ## KEGG: XBJ1_1006 # Name: not_defined # Def: holin # Organism: X.bovienii # Pathway: not_defined # 1 94 1 94 97 96 55.0 2e-19 MQEHEKTLFGLLIAGFLIAMGQLLNGSEPITARLFLGRVILGTGVSVSAGAVLLWVPDLP PLAIIALGTALGIAGHTWFENWLRKKGASLLKGKKP >gi|316920349|gb|ADCU01000001.1| GENE 185 203446 - 203787 437 113 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0985 NR:ns ## KEGG: ECUMN_0985 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 113 1 113 113 199 84.0 3e-50 MTLSEKQQLFVSLIAQLITWANDKGYRLTFGEAYRTPEQAKLNAKSGAGIANSLHTQRLA VDFNLFVNGEYKTKTEDYLPLGEYWESLGGAWGGRFKSRPDGNHFSLEHNGVR >gi|316920349|gb|ADCU01000001.1| GENE 186 203787 - 204149 229 120 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0986 NR:ns ## KEGG: ECUMN_0986 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 6 117 4 114 126 120 63.0 2e-26 MARTLAMLIAALLASFFAGWQTNDWRRDSLELAINQAASAAGDESRTAMQKVASQSAREL ETTLEALRNAKPPKEIYREMVKPVFTNVCLSAEYVSLYNATVEQTERALSRKPENKMSGK >gi|316920349|gb|ADCU01000001.1| GENE 187 204046 - 204294 138 82 aa, chain + ## HITS:1 COG:no KEGG:SNSL254_A2924 NR:ns ## KEGG: SNSL254_A2924 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Newport # Pathway: not_defined # 23 78 3 57 62 76 71.0 3e-13 MCACLLSMSACTTPPLNKPSVPYQENLKIKCQENDLPRLTGTQGTAAAEALNTWPEIYGQ CAARHNQLIDEINKREEINHER >gi|316920349|gb|ADCU01000001.1| GENE 188 204284 - 204547 355 87 aa, chain + ## HITS:1 COG:no KEGG:SeHA_C3479 NR:ns ## KEGG: SeHA_C3479 # Name: not_defined # Def: phage protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 4 87 2 85 85 115 75.0 3e-25 MSDKKIVLTVGGAELTFEPNTTAYNKFINEMAMDNKVSPAHNYLMRIVAAESKEALTTIL ELPGAALQLATKVNEIFAPVLEISVKN >gi|316920349|gb|ADCU01000001.1| GENE 189 204592 - 204738 72 48 aa, chain + ## HITS:1 COG:no KEGG:XBJ1_1011 NR:ns ## KEGG: XBJ1_1011 # Name: not_defined # Def: hypothetical protein # Organism: X.bovienii # Pathway: not_defined # 1 47 6 52 52 66 70.0 3e-10 MILRRHYLPHENDEPDNLAAALWLDNRYWEYHRIAVANGIALAFKGDK >gi|316920349|gb|ADCU01000001.1| GENE 190 204735 - 206912 1638 725 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0988 NR:ns ## KEGG: ECUMN_0988 # Name: not_defined # Def: putative tail tape measure protein from bacteriophage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 1 725 1 686 686 855 63.0 0 MKQLEFTLSLIDKLTRPLKQAQGAVKGFAENSQAHFAKVGIGAAALWGVGQTIQGALSPA IEMYDALQEASARAVDDTALKSVRDSALTFSMQYGRSAVEFVQSTADINAAIIGLTGDEL PKVTKTANIVATALKTTAGEAAEFMGQMFGQFNQYAQQVGKVQFAEELAGKMAYMKQTFG TDMATIKDLMEGARGVGSNYGVGMDEQLAVLGQLQRTLGTEASSSYEGFMTGAAEGAKKL GLSFTDTNGKLLAMPAMLEKLQGKYGASIEGNLKAQAELDAAFGDSSAVIKHLYGNVSVL QRNITELGGSDGLKRAQEMASKMVKPWDRLMQVFTAIRTVIGLTLIPVLYPVLNKLAEMG ATFARWMQLFPNIARVVGYAAMALLSFAAVGAIANIVMGVSGFIMMGLRGIWAGLMSITK LYTAAVWLARTSMLAWNAILRVTRGVLLALRMAAITAGIGINLMSWPILLIIGAIALLVA GCYYLIKYWDDIKRAVMDTAAFQSLINVMGYVGDIFKNVWASIVEGWHSVVSAITGFSLS DAMSGMVSGISELFNGLWASMKQSFSSSYDWIIEKLNLIPGVNISASTASDSLPEMSRGL PASQVATAPAAIVPDTVKAVPVMPHGITPKTVPNVVQSVPVVPGDVSASPVMQNTINNVR NTQFTRNNISTGNQVKGIERGGLNKEINNNNKKITDNSKSIGTVNIFPKEMMSSETLMEW QELGA >gi|316920349|gb|ADCU01000001.1| GENE 191 206909 - 207238 246 109 aa, chain + ## HITS:1 COG:no KEGG:Dd586_0758 NR:ns ## KEGG: Dd586_0758 # Name: not_defined # Def: protein of unknown function DUF2590 # Organism: D.dadantii_Ech586 # Pathway: not_defined # 1 109 1 109 109 151 66.0 8e-36 MSELQYVDLYILNHDFSLNAGNEPDTCNNQISIGQDIVHAIYESGLVTQLVAERSPTLRA DLFTQLELLVESDERIVPGSVVVQEETKQRLWITAETYDFGAVSTRADL >gi|316920349|gb|ADCU01000001.1| GENE 192 207235 - 208419 1013 394 aa, chain + ## HITS:1 COG:no KEGG:ECL_02836 NR:ns ## KEGG: ECL_02836 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 394 1 394 394 627 75.0 1e-178 MTNKPNVDFEQVLKDSGMPTTEAEIRSEFNKVVKAEGLITNTSRMSPFWRLITAIVTTPV LWIKDVLVGTVLANMFVATASGQMLRLLAWAVNLTAKPATAAEGVIRFVKQDAKAAVTVK AGTQIQTERINGVVYVLATVSDFTIPAGVPNALIPVKAQAAGGAYNLAPGYYRIFPVAVD GISHAMNEDDWLLAPGADEESDDELRERCRNQFNLVGNYHTDAVYRSMIAGVAGLSIDRI FFLHDAPRGAGTANAYLLLDSGVTSQPFIDAVNDYINTQGHHGHGDDMQCMAMPETRHTL AVSLFVTNPDNMTEDEKATLLGGVENLIRCAFRENSNYDVKKTWPYSRFSFSNLGREVHK TFEVVDSLHFSLADIVSDLAVPRLAALTVELKHD >gi|316920349|gb|ADCU01000001.1| GENE 193 208412 - 209008 608 198 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0991 NR:ns ## KEGG: ECUMN_0991 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 196 3 197 197 300 73.0 3e-80 MTEFEKRLASLKLPSWMDKGEPAKLLAGARVFWLGVLAWVQWPLRQFDPLTCVEPMLNLL AYDRDVSRFNGEPLALFRKRVAYAFVNARDAGSVEGFIAIFQRLGIGYVELLERQPGIDW DVITVRVTDSQIADNTELLLEIIRQYGRTCRRYRFEVITTQKMFIRAGWYEGEYVCYVAS LSQKTNNNSATYGAKLGG >gi|316920349|gb|ADCU01000001.1| GENE 194 209010 - 211244 1188 744 aa, chain + ## HITS:1 COG:no KEGG:SeAg_B2783 NR:ns ## KEGG: SeAg_B2783 # Name: not_defined # Def: phage tail fiber repeat-containing protein # Organism: S.enterica_Agona # Pathway: not_defined # 1 335 1 339 670 413 63.0 1e-113 MSQTTITLAFEQWKAQQAIDGKAVVLDEFVLANVPNLDIDSPIDRAEQLPAAQHIVHRQA VSATGLVNENAVVYSVTMGTEVGDFAFNWVGLINKATGTLAMIVHAPLQSKIKNAEGKQG NVLTRSFLMEYTGAASETQITTPAETWQIDFTARLSGMDERQRLENVDLYGAAAFFGDGF LVTRAASQYNITQGIGYVGGLRCKLPATQNITVTTKPVKVWADVCWKGTLTSVWAEELKI TVANTLANYVQDGVQHYVFAVANIDANGVITDLRPKGSLDGQQGNKDFLRIDKSLSEIAT KGVQAQAEARKNLALGDAATKNVQKSVTDSTPNALMINGAWGLGASGVGMVDSDILSPTS IGNTFFNQGGGAANSHFGGYGTGIHLSYGSNGDNKQRLTANLFVDSAGNLSVEWLAVNKS DGATVVKNIQKLYGPLNKPSAADVRAIPFFGGISAGTNLNTLTEPGIWFNPANANASLAL NYPSTQAGSLQVLQDAGVTQIYTEYSSGAGRQWRRGLYSGVWSAWRVVYDSYNKPSASDV GALPIVGGTLNGNLTVKNQIQVGSVGNGFLAIGDNDSGLRSSVDGQVDLYANGRMYGYWN TGVFSFTGQIIPSNYNNFDARYQAKGNYTPAGEAYTKAVSDTRFQPKGNYTPAGEAYTKA VSDARFQPKGNYTPAGEAYTKGESDGRYMRDVRLGTQARTGDGSFTIPAGCVVTSVWSVN WGVHALYYKPIQRNINGTWVTISG >gi|316920349|gb|ADCU01000001.1| GENE 195 211249 - 211776 350 175 aa, chain + ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 100 172 172 244 247 80 54.0 1e-15 MQLLNLKIYEPTQKLSDDALHLIDENGLDWYESQSKFKDNTLKIACDDQAIIRSSSFDIS MLWPVSLSVFEVDKNKIPKGFPEQPDDNWIFDGKKIAPREVPKSELLAQAEETRAQLMAE ANHKITPLQDALDLDMATDEELAQLNAWKTYRVLLSRIDVSRVPDIEWPEVPNVA >gi|316920349|gb|ADCU01000001.1| GENE 196 211766 - 212491 462 241 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0994 NR:ns ## KEGG: ECUMN_0994 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 241 1 241 241 254 56.0 2e-66 MWREAKIAFPDELSALNCAIVPAHPWVYGLGQQTDTGAYLSPTNAVQYLSAKLLATGGRA DVTIFMICGDTHDGFMKGLSTLAAVFPAPAFTQVSRMAQAAAELQQVKMQLPGKAGNSLP AALPLSVSTNRAALNALRTAKAQVESSAGSSLAGMQAELASFANEHASQLAQIQEGLDAL KGLSANAWVFTGSGDLVTMATELVKTVPQPSAVYTVAMMFVADDLSSLGGMIHDVDCNAG A >gi|316920349|gb|ADCU01000001.1| GENE 197 212463 - 213008 542 181 aa, chain + ## HITS:1 COG:no KEGG:YPK_0917 NR:ns ## KEGG: YPK_0917 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis_YPIII # Pathway: not_defined # 1 181 1 179 182 217 68.0 2e-55 MTSIVMLALNGEGIPLKDMRVTPTMQIQDKDQSGQTSSTGTAEQGIKPKELRVSGVVPYA NPEILKRIFELAQAKDTAGKQQTYRVAHLVANTIGFREATFTGTVDAPQQDGKMAWLVTF TLREKQSVPEKKEARAGNKTAAQKQTQNGGGKGGGGSSAEDSEKLSWFESKVLKPVNDAL G >gi|316920349|gb|ADCU01000001.1| GENE 198 213012 - 214688 1040 558 aa, chain + ## HITS:1 COG:no KEGG:ECL_02828 NR:ns ## KEGG: ECL_02828 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 557 1 556 558 824 72.0 0 MKPIKRLYLSGDEVHLVDATLALELSACGRGFITAQTDTDYTGKMVRLDVGYPELVLRWF TGYVERSQSSENGYQRLFVRELVGIFERAWPCSFQHPTLRQIAEWLTEHSGLTVQVPNQN YSDKPIPHFTHSGNGYQLLANLGRAFSINDYVWYQLPDGDVYVGSAAHALFADKPVNIPA EFSLRTAGGNSMTVPLVQSLRPGAEVNGQRLTLVKLHNDEMAITWTPRNKATGQPLQKTP LQRQVEGAYPELASGLHLPKFARVEAPSEPVSSGNVADPFRPRYAVDLQLLDENGQPAKD TPLYSAVPLPVPMAGSESGMFQFPPAGSLVEVAFTAGRPDKPFVRQIMPTGHNLPDVKPG EQLQQQRAEVSQRVTQAGDWVRQTDQTISESSMVREVMADDEKRTVVARETMVKATDKTT VIGTAKLMAGAIVQVTTGDYALGTQGNYVASITGNASTKINGGMDLDVSNSLIEKVGAIR QSVAKAKQEIIAPTVWVGSQTINVMQLMLDTLDVVKQLAQQTAQHTHKETGAPLNAAAIQ ATGTTADSLNGKYKPIIS >gi|316920349|gb|ADCU01000001.1| GENE 199 215789 - 216439 254 216 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFEHFILAAIDVWKDAPTFYAGLLGAAIAVTGILAQRKTSREKNSLDFEAAYKRNDKILD AWDVVLNIYKQRAEVPVAIYGTKEKVGTIEAKALQTIFNEWERCANAVNHKIYDDKYLYR VFGSTLIFLDTNFEPYMEECRKTNPRFYRNMKWLALTWRVRRAHEDHENDHDKHGMDLRI CNRQAEVCEEYCKINKYHRKTFRSAKKAVKAIRVKR >gi|316920349|gb|ADCU01000001.1| GENE 200 216531 - 217355 241 274 aa, chain - ## HITS:1 COG:no KEGG:YPTS_3563 NR:ns ## KEGG: YPTS_3563 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis_PB1 # Pathway: not_defined # 1 270 1 275 276 345 60.0 1e-93 MGRQIPQPIISVVSEYIACAETHATLDSLFIYADAPGEAPTGSKAAKALEWLRRINKESD NPLAILGRLLEGYMEANFLDNPRSDEEKDKAEFVNKMHELFGKYGLSYVTGGFISDGSSI TSSSLKEAIEKRNIPAVEMEFTRAMENIHTAPREAVSAACNIMESTFKIYIADEKLTPPT KQDLQGLWKTVRDSLGLDTKIIEDEDLKRILSGLYSITDGIGALRTHASSAHGAGRKIYR LQPRHARLAINAAHTLTMFILESWDEKLTTAKAS >gi|316920349|gb|ADCU01000001.1| GENE 201 217869 - 218390 425 173 aa, chain - ## HITS:1 COG:ECs3482 KEGG:ns NR:ns ## COG: ECs3482 COG0691 # Protein_GI_number: 15832736 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Escherichia coli O157:H7 # 14 173 1 160 160 263 81.0 1e-70 MFIPRVVQYNGSTMTKKKAHKPGSATIAMNKRARHEYFIEEEIEAGLALQGWEVKSMRAG KANITDSYVTFRDGEAYLFGATIQPLNVASTHVVCDPTRTRKLLLKKRELETLIGKVSRD GFTVVALSLYWKNAWSKVKIGLAKGKKEHDKRDDIKDREWKLDKARIMKNSNR >gi|316920349|gb|ADCU01000001.1| GENE 202 218509 - 218943 324 144 aa, chain + ## HITS:1 COG:YPO1102 KEGG:ns NR:ns ## COG: YPO1102 COG2867 # Protein_GI_number: 16121402 # Func_class: I Lipid transport and metabolism # Function: Oligoketide cyclase/lipid transport protein # Organism: Yersinia pestis # 1 144 1 144 144 253 84.0 1e-67 MPQISRSALVPFSATQMYQLVNDVSAYPAFLPGCVGSRVLESGPNSMTAAVDVSKAGISK TFTTRNTLADSSSIKMQLVDGPFRKLLGGWHFIPLSDDACKVELHLDFEFTNKLVELAFG KVFKELAGNMVQAFTSRAKEVYSA >gi|316920349|gb|ADCU01000001.1| GENE 203 218936 - 219220 305 94 aa, chain + ## HITS:1 COG:YPO1103 KEGG:ns NR:ns ## COG: YPO1103 COG2914 # Protein_GI_number: 16121403 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 94 1 94 94 117 74.0 3e-27 MPDINVEVVYALPERQYLRRIKLPEGANVEQAIQQSGLLALRTEIDLAKNKVGIYSRTVK LSDKVHEGDRVEIYRPLLADPKELRRLRAERAKK >gi|316920349|gb|ADCU01000001.1| GENE 204 219298 - 219648 400 116 aa, chain - ## HITS:1 COG:YPO1104 KEGG:ns NR:ns ## COG: YPO1104 COG2913 # Protein_GI_number: 16121404 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Yersinia pestis # 1 110 4 113 116 180 80.0 5e-46 MRCKMLTAAAVVMVTLTAGCSTFEKVVYRPDINQGNYLTAADVAKIHRGMTQQQVAYTLG TPMLQDPFGTSTWFYVFRQQPGHEAVTQETLTLTFDGSGVLTNIENTKKLPDNSEE >gi|316920349|gb|ADCU01000001.1| GENE 205 219761 - 221422 1443 553 aa, chain - ## HITS:1 COG:YPO1105 KEGG:ns NR:ns ## COG: YPO1105 COG0497 # Protein_GI_number: 16121405 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Yersinia pestis # 1 553 7 559 559 788 78.0 0 MLTQLTISNFAIVRELEIDFQRGMTAITGETGAGKSIAIDALGLCLGGRSEAAMVRLNTP RADICARFSLADTPSARQWLEQNQLDDSNECLLRRVISADGRSRGFINGTAVPLSQLREL GQHLIQIHGQHAHQLLLKSEHQKHLLDAYSNQSELLAEMQAAYRQWHHSCRLLTHHQKQV AERESRKQLLQYQLKELNEFAPQAGEYEQIDEEYKRQANSGQLLTISQRALNMLSEAEDG NILSLLHSAKQNVSELISYDSQFSPLLDMLEEASIQISEASNELRHYGDNIDMDPARLYE LEQRISRQIALARKHHVSPEELPQFHQQLLDEQQSLCQQESEQEQLAENVHIHHQQALSL AQQLHQQRVEFAQELSSLITHSMHELSMPHGQFAIDVNFMPEALTADGADRIEFSVTTNP GQPLQPLAKVASGGELSRIALAIQVITAQKMDTPALIFDEVDVGISGPTAAIVGKMLRQL GESTQVMCVTHLPQVAGCGHQHFYVSKQTDGSETETTMQPLDKKARLQELARLLGGSEVT RNTLANAKELLAA >gi|316920349|gb|ADCU01000001.1| GENE 206 221520 - 222398 642 292 aa, chain - ## HITS:1 COG:YPO1106 KEGG:ns NR:ns ## COG: YPO1106 COG0061 # Protein_GI_number: 16121406 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Yersinia pestis # 2 292 3 293 293 513 83.0 1e-145 MNKKFECIGLVGHPRHPAALATHEMLFNWLVGKGYPVIVEHQIAHDLKLENATTGSLADI GQQADLAVVVGGDGNMLGAARILARYDIKVIGVNRGNLGFLTDLDPDNAKQQLSDVLDGE YFSEQRFLLEVQVCREQQQRRMSTAINEVVLHPGKVAHMIEFEVYINENFAFSQRSDGLI ISTPTGSTAYSLSAGGPILTPTLDAIALVPMFPHTLSARPLVIDSNSKIHLRFSHFSNDL EISCDSQIALPIQQGEEVMIQRSQFHLNLIHPKDYNYFNTLSTKLGWSKKLF >gi|316920349|gb|ADCU01000001.1| GENE 207 222522 - 223109 769 195 aa, chain + ## HITS:1 COG:YPO1107 KEGG:ns NR:ns ## COG: YPO1107 COG0576 # Protein_GI_number: 16121407 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Yersinia pestis # 1 195 1 192 192 222 71.0 4e-58 MSSKEQNMSNEQASQEMENGQEQHEQAQVDAADVVDVRDERIAELEAQLQEAAQRERDSV MRARAEADNIRRRAEQDVEKAHKFALEKFSNELLPVIDSLERALDLADKSNPDLAAMIEG IELTLKSMLDAVRKFGVEQVGEVNVPFNPEVHQAMTMMESDQHEPNQVMMVMQKGYTLNG RLIRPAMVAVSKAKA >gi|316920349|gb|ADCU01000001.1| GENE 208 223164 - 223859 605 231 aa, chain - ## HITS:1 COG:YPO2704 KEGG:ns NR:ns ## COG: YPO2704 COG0692 # Protein_GI_number: 16122908 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Yersinia pestis # 1 225 1 225 228 364 79.0 1e-101 MTSPLNWHDVIGAEKEKPYFHDTLAFVAAERQAGKTIYPPQKDVFNAFRFTEFNDVKVVI LGQDPYHGPNQAHGLSFSVRPGIPAPPSLMNMYKELQTDIEGFQIPNHGYLKSWADQGVL LLNTVLTVERGQAHSHAKLGWETFTDKVVAALNEHRSGIVFLLWGAHAQKKGSIIDTQRH RVLKAPHPSPLSAHRGFLGCHHFSQTNRLLIEQGLTPIDWQPRLPENGSEE >gi|316920349|gb|ADCU01000001.1| GENE 209 224240 - 224623 472 127 aa, chain + ## HITS:1 COG:ECs3445 KEGG:ns NR:ns ## COG: ECs3445 COG3445 # Protein_GI_number: 15832699 # Func_class: R General function prediction only # Function: Acid-induced glycyl radical enzyme # Organism: Escherichia coli O157:H7 # 1 127 1 127 127 222 86.0 1e-58 MIQGIQITKADNADLMNSFWLLDTDKNEARCVCAKAGYAEDQIVAVSELGQIEYREVPLD IKPTVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIA RTFTESL >gi|316920349|gb|ADCU01000001.1| GENE 210 224564 - 224731 65 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLCSYFVLFSKVLWATNVKKELFSSFLLCPIASNLKLQAFSKGTSDNVTLLFWSQ >gi|316920349|gb|ADCU01000001.1| GENE 211 224927 - 226255 1366 442 aa, chain - ## HITS:1 COG:YPO2708 KEGG:ns NR:ns ## COG: YPO2708 COG0513 # Protein_GI_number: 16122912 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Yersinia pestis # 1 433 1 433 441 707 83.0 0 MTASNFSELELDERLLDALRDKGYDRPTAIQAAAIPPAMDGRDVLGSAPTGTGKTVAYLL PVLQHLLDFPRKKSGPPRVLVLTPTRELAMQVAEQAIELAKHTNLDIATITGGVAYMNHA EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAAETRW RKQTMLFSATLEGDAIKEFSERLLQDPVEIEADPSRRERKKIQQWYYRADTLEHKTKLLC HLLKEPEVTKSVIFVRKRERVHELVGWLREAGINSCYLEGEMVQAKRNEAMKRMLDGRVN VLVATDVAARGLDIPDISHVFNFDMPRTADTYLHRIGRTGRAGRKGIAISLVEAHDHLLL GKISRYVEEQIKSRVVDELRPTTKPPSEKNKGKPSKKTLLKRQEKKDEEKKDKKVKVRHR DSKNVGKRRKPKAAQSVTPTEE >gi|316920349|gb|ADCU01000001.1| GENE 212 226405 - 227154 277 249 aa, chain + ## HITS:1 COG:ECs3441 KEGG:ns NR:ns ## COG: ECs3441 COG4123 # Protein_GI_number: 15832695 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Escherichia coli O157:H7 # 11 248 48 284 285 259 55.0 2e-69 MTQRPSESVPLRRNGFTFKQFFVAHDRCEMKVGTDSILLGSWTDISNLDGKILDIGTGSG LLALMLAQRTTDVVQIDAVELDQNAATQAAENFVLSPWANRMRVHTCSLQAFAAQTSERY DLIVSNPPYYPQGVECRNVSRNTARYTSELSHQSLLKHARELATDNGRMAVVLPTDVGVS FIQTAAQEGWFILHYTEIAEFDDRVARRSLMLFGSKPVNQQSDRLVIRDKSSEYSHDFRL LTKDFYLFF >gi|316920349|gb|ADCU01000001.1| GENE 213 227410 - 228789 1470 459 aa, chain + ## HITS:1 COG:VC0662 KEGG:ns NR:ns ## COG: VC0662 COG1114 # Protein_GI_number: 15640682 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Vibrio cholerae # 1 451 1 428 437 403 55.0 1e-112 MQQRLSTADTMGLGLMTFAFFLGAGNIIFPPLEGQMAGHNVLYAMGGFLLTAVGLPLLSI IAVARAGGGLPSMTHDLPKGTGTFAAVLLFIIIGPAFAAPRTGLVAFEMAVKPLLVSSGS YSDTPVTLGSLTLDGLQMLVTALFFAVTLMLAWSRGKLIDSIGKFLTPMLFLLLVVLALG VIFKPQGDIVAPVAAYEQMAFSKGFISGYNTMDTFAALMFGMLLVDVLRGKGVTEPKACF RYLSIAGVIAALGLAFVYISLFWLGATSSTIAGGADNGGVVLAAYVKALFGQPGQWILSL VVMLACLTTAVGLVSACADYFSTLTPLRYRHWVIVLCLICAVVANVGLSRLIALSVPVLM ALYPLAIALVALTFVRRWLRNPVLGYRLVMLVALLCSLLDGARAAGVESIGWLARLLDWQ MAAMPLAAEGMAWVLPTFIMLVLAFFLPAKSRNQKVALA >gi|316920349|gb|ADCU01000001.1| GENE 214 228872 - 230473 1301 533 aa, chain - ## HITS:1 COG:YPO2710 KEGG:ns NR:ns ## COG: YPO2710 COG0029 # Protein_GI_number: 16122914 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Yersinia pestis # 1 533 13 545 545 984 87.0 0 MQPNSEHFNDVLIIGSGAAGLSLALRLAEHCKVTVLSKGPFNEGATFYAQGGIAAVFDET DSIESHVQDTLIAGAGLCEPSAVEFIARNAKDCVQWLIDQGVLFDTEMSPAGESRYHLTR EGGHSHRRILHSADATGKEVETTLVQKANAHPNIRVCERYNAVDLITSKKIGLPGTQRVV GAYVWNRDLERVETLRARTVVLATGGAAKVYQYTTNPDISSGDGIAMAWRAGCRIANLEF NQFHPTCLYHPQARNFLLTEALRGEGAFLKRPDGSRFMPDFDERGELAPRDIVARAIDHE MKRLGADCMYLDISHKPADFIMQHFPMIYEKLLDLGLDLTKEPIPIVPAAHYTCGGVMVD HQGRTDLEGLYAIGEVSYTGLHGANRMASNSLLECVVYAWSASQDILQRLPQTSLAPSLP EWDDSRVYNSDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRIQMLQQEIDEYYAN FRISNNLLELRNLVQVAELMVRCAMERKESRGLHYTLDYPDLLAEPKPTILQP >gi|316920349|gb|ADCU01000001.1| GENE 215 230688 - 231263 358 191 aa, chain + ## HITS:1 COG:STM2640 KEGG:ns NR:ns ## COG: STM2640 COG1595 # Protein_GI_number: 16765960 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Salmonella typhimurium LT2 # 1 191 1 191 191 346 95.0 1e-95 MSEQLTDQVLVERVQKGDKKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQESFIKAYRA LESFRGESAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDASEAENFESAGALKEISNPEN LMLSDELKQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA IDNKVQPLIQR >gi|316920349|gb|ADCU01000001.1| GENE 216 231293 - 231937 568 214 aa, chain + ## HITS:1 COG:YPO2712 KEGG:ns NR:ns ## COG: YPO2712 COG3073 # Protein_GI_number: 16122916 # Func_class: T Signal transduction mechanisms # Function: Negative regulator of sigma E activity # Organism: Yersinia pestis # 1 214 1 218 218 259 67.0 3e-69 MQKEQLSALMDGEVVDSELIGSLGKDDALQQTWKSYHLIRDTLRGDVSDAIEFDISDRIA AALDDEPVRLVPNAIPESQPQPHSWKDMPFWSKVRPWASQITQIGIAACVSLAVLVGVQQ YNQPAGGVSDSDAPAFNTLPMGGQASPVSFGVPNESTNANGQQQVQQQRKRINAILQDYE LQRRLHTEQLQMDNGNTQASVQVPGTLSLGTQQQ >gi|316920349|gb|ADCU01000001.1| GENE 217 231937 - 232899 666 320 aa, chain + ## HITS:1 COG:STM2638 KEGG:ns NR:ns ## COG: STM2638 COG3026 # Protein_GI_number: 16765958 # Func_class: T Signal transduction mechanisms # Function: Negative regulator of sigma E activity # Organism: Salmonella typhimurium LT2 # 1 313 1 312 318 420 65.0 1e-117 MKQFWFAISLFAGSLFVSNIASAEDSSEAMLQQMNSASQSLSYELAYINITKQGIESLRY RHAIFNKQLLSQLLQMDGPRREVLLRGNEISYFEPGLEPFTLNGDHIVDALPSIIFSDIK QLRQYYNFISVGRTRVADRPCEVIRIVSRDGLRFSYIVWIDESSKLPLRVDLLDRDGETL EQFRVISFTVGDQVTAAMSSLAQLTLPPLLKLPATDKVDFSWRTSWLPQGFKEVSRSRRT LPTLSEPVESRLYSDGLFSFTVNISSAASGAAVSEQFLRQGRRTIHTETRNNVDITVVGE LPPATAKRVANSIVLDGRKS >gi|316920349|gb|ADCU01000001.1| GENE 218 232896 - 233360 357 154 aa, chain + ## HITS:1 COG:YPO2714 KEGG:ns NR:ns ## COG: YPO2714 COG3086 # Protein_GI_number: 16122918 # Func_class: T Signal transduction mechanisms # Function: Positive regulator of sigma E activity # Organism: Yersinia pestis # 1 149 1 149 151 181 57.0 4e-46 MMREWATVTSWHQGVATLNCEQRSSCGSCGAKNTCGTAVFDKINPQSQHQLQVEIDQQLE PGQKVEIGITEANLLRSAVLVYLTPLLGLIIGGGVGQSVMHTDAWAALGALVGAGAGFMF ARIKAKRLSDRQDYQPIVLQVGLPPSMIRTPTNI >gi|316920349|gb|ADCU01000001.1| GENE 219 233493 - 235286 1805 597 aa, chain + ## HITS:1 COG:YPO2716 KEGG:ns NR:ns ## COG: YPO2716 COG0481 # Protein_GI_number: 16122920 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Yersinia pestis # 1 597 1 597 599 1130 93.0 0 MKHIRNFSIIAHIDHGKSTLSDRIIQICGGLTDREMAAQVLDSMDLERERGITIKAQSVT LDYKAQDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAM EMDLEVVPVLNKIDLPAADPDRAAQEIEDIVGIDAMDAVRCSAKTGVGVPEVLERLVRDI PPPEGDPDGPLQALIIDSWFDNYLGVVSLIRIKNGSLRKGEKVKVMSTGQAYNADRLGIF TPKQIDRDVLNCGEVGWLVCAIKDIHGAPVGDTLTLARNPAEKSLPGFKKVKPQVYAGLF PVSSDDYEAFRDALGKLSLNDASLFYEPETSTALGFGFRCGFLGLLHMEIIQERLEREYD LDLITTAPTVVYQIETTSGDVIFVDSPSKLPPINNIEELREPIAECHMLLPQEYLGNVIT LCIEKRGVQTNMVYHGNQVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYSFKRFQQSDM VRVDVLINNERVDALALITHRDNAQYRGRELVEKMKELIPRQQFDIAIQAAIGNQIIARS TVKQLRKNVLAKCYGGDVSRKKKLLQKQKDGKKRMKQVGNVELPQEAFLAILHVGKD >gi|316920349|gb|ADCU01000001.1| GENE 220 235404 - 236378 993 324 aa, chain + ## HITS:1 COG:YPO2717 KEGG:ns NR:ns ## COG: YPO2717 COG0681 # Protein_GI_number: 16122921 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Yersinia pestis # 1 324 1 332 332 512 73.0 1e-145 MANMFALILVIATLVTGVIWCIDRFKLAPARRAKIEAINAQTVEGLDKQTAKDVVKAPGW IETCVSVFPVLALVLIIRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKEPIAQHTI IPTGHPKRGDIVVFKYPLDPRLDYIKRAIGLPGDKVTYDPYSKEVTVYPACQTGQSCDKL LPITYSAAEPSEWVQTFGQMGNGEASSGFFQVPLDQNVEDGYRMSERKETLGTVTHRVLT VPQAQDMMSRYYRQPGQPQGVWVVPEGHYFMMGDNRDNSADSRYWGFVPEQNLVGKATAI WMSFEKQEGQWPTGVRLNRIGGIH >gi|316920349|gb|ADCU01000001.1| GENE 221 236676 - 237356 558 226 aa, chain + ## HITS:1 COG:STM2581 KEGG:ns NR:ns ## COG: STM2581 COG0571 # Protein_GI_number: 16765901 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Salmonella typhimurium LT2 # 1 226 1 226 226 398 92.0 1e-111 MNPIVTNRLQKKLGYTFQQQELLLQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI GGIFLDSDIQTIERLILDWYRSRLDEISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR GEAHDQEFTIHCQVSGLSEPVIGVGSSRRKAEQAAAEQALKQLELE >gi|316920349|gb|ADCU01000001.1| GENE 222 237353 - 238258 866 301 aa, chain + ## HITS:1 COG:YPO2719 KEGG:ns NR:ns ## COG: YPO2719 COG1159 # Protein_GI_number: 16122923 # Func_class: R General function prediction only # Function: GTPase # Organism: Yersinia pestis # 1 301 1 302 303 545 90.0 1e-155 MSEETTYCGFIAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGIHTEGPYQAIY VDTPGLHIEEKRAINRLMNRAASSSIGDVELVIFVVEGTHWTADDEMVVNKLRDLKAPVI LAINKVDNVQDKAALLPHIQFLSEQMNFMDVVPISAEKGTNVDTIASIVRKKLPEAIHHF PEEYITDRSQRFMASEIIREKLMRFLGEELPYSVTVEIERFVSNDRGGYDINGLILVERE GQKKMVIGNKGSKIKTIGIEARQDMEAMFEAKVHLELWVKVKSGWADDERALRSLGYGED L >gi|316920349|gb|ADCU01000001.1| GENE 223 238271 - 238999 657 242 aa, chain + ## HITS:1 COG:YPO2720 KEGG:ns NR:ns ## COG: YPO2720 COG1381 # Protein_GI_number: 16122924 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Yersinia pestis # 1 240 1 240 241 385 80.0 1e-107 MEGWQRAFVLHGRPYSETSLLLDLFTEGHGRVRLLAKGARSKRSSLKGALQPFTPLLVRW GGKGEVKTLRNAEPVSLGLPLTGISLYSGLYVNELVSRVLEQETNYSSLFFDYLNCLQNL AATVGSPEHTLREFELALLGNLGYGIDFLHCAGSGEPVSDDMTYRYREEKGFIASLLVDQ LSFTGRDLKALAERRFPDPITLRAAKRFTRMALKPYLGGKPLKSRELFRQFVGKRPVKPA SA >gi|316920349|gb|ADCU01000001.1| GENE 224 239131 - 239862 727 243 aa, chain + ## HITS:1 COG:YPO2930 KEGG:ns NR:ns ## COG: YPO2930 COG0854 # Protein_GI_number: 16123117 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal phosphate biosynthesis protein # Organism: Yersinia pestis # 1 243 1 243 243 385 83.0 1e-107 MADLLLGVNIDHIATLRNARGTQYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRL LRQTIQTRMNLEMAVTDEMIEIACELNPHFCCLVPEKRQEVTTEGGLDVAGQLDKMMVAV ERLTQAGILVSLFIDADPRQIEAAVSVGAPYIEIHTGAYADAESDLKRQAEFERIAHAAR FASERGLKVNAGHGLTYHNVLPIAALPEMHELNIGHSIIGRAVMSGLPEAVNAMKQLMLE ARR >gi|316920349|gb|ADCU01000001.1| GENE 225 239862 - 240242 424 126 aa, chain + ## HITS:1 COG:YPO2929 KEGG:ns NR:ns ## COG: YPO2929 COG0736 # Protein_GI_number: 16123116 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Yersinia pestis # 1 125 1 125 126 189 76.0 1e-48 MAVLGLGTDIVEISRIEAVVARSGDQMAKRVLAPAEWEQYLSHQQKIRYLAKRFAVKEAA AKAFGTGIRNGLAFAQFEVYNDALGKPVLRLHGRAAELAQEMGITSIHVSLADERRYACA TVIVEG >gi|316920349|gb|ADCU01000001.1| GENE 226 240295 - 243036 1838 913 aa, chain - ## HITS:1 COG:STM2958_1 KEGG:ns NR:ns ## COG: STM2958_1 COG0642 # Protein_GI_number: 16766264 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 1 518 1 523 525 779 76.0 0 MTKYSLRARMMILILAPTLLIGLLLSTFFVVHRYNELQGQLVDSGSSIIEPLAVASEYGM TFRSRESVRQLIGLLHRRHSDIVRSIAVFDDNNDLFVTSNYHHNYSLLQLPKGVPMPNDL MLSKHGDSLILRTPIISEDRFIDATSAENPHLGYIAIELDLRSVRLQQYKEVFVATLLLV ICMCIALLFAYRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGHMLGELDMLKNGINSMAM SLTAYHEEMQQNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELR TPLNGVIGFTRQVLKTPLNATQSDYLQTIERSANNLLTIINDVLDFSKLEAGKLVLEHIP FLLRETIDEVTVLLAPSAHEKGIELTLNIRNDVPEHVIGDPMRIQQVLTNLLGNAIKFTE KGNIDIRVELRSATPHQVELEVLVHDTGIGISERQQSQLFQAFRQADASISRRHGGTGLG LVITQKLVNEMGGDISFHSQPNKGSTFWFHIQLELNHNAPQSHFPMQRLAGQKLLYIESN PVAAQCTLDLLQATPLEVSYSPLLAQVIPDSHYDILLVGLPVNFTSHDSQGEEKLRKALS LADRVILAMPSHTLLDSDELKMRGIRSCLSKPLTSNRLLPILLDNSLPKRAPVVIDHNAE RLPLSVMAVDDNPANLKLIGALLGELVEQTILCNSGEEAIAKAKEHRLDIILMDIQMPEM DGIRTSELIRKLPRYIDTPIIAVTAHAINGERERLLRAGMDDYLAKPIDENMLRQLLARY YRSPEIQDEMISMPAIEADSDLTLDWDMALRQAANKEDLARDLLQMLLEFLPQVKTQVEA ALSGHQDASIVDVIHKLHGSCSYSGLPRLKRLCRYIEQQLRHQIAVGDLEPEWMELLDEI ANVEQAAREKLAN >gi|316920349|gb|ADCU01000001.1| GENE 227 243113 - 244429 876 438 aa, chain + ## HITS:1 COG:ygcA KEGG:ns NR:ns ## COG: ygcA COG2265 # Protein_GI_number: 16130692 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 435 1 429 433 559 63.0 1e-159 MAQFYSPGRRMATRQTITVTANDLDPFGQGVARHNGKAIFVPGLLPSEQAEVTLTEDKKQ FARAKLKRLLTRSPERVMPRCPHFGVCGGCQQQHASVPLQQQSKSASLQRLIIRETEVNI IPESVISGPEYGYRRRARLGLQFLSKQQQLVMGFRQAGSNDLVPVKECPILVPALASLLQ PLQACLAGMKAVRRLGHAELVQADNGCVLVLRHLEALKEQDLARLHDFGAQHDVMVYLQG NEGELVKLCGESPFYQVDELRLFFSPRDFIQVNDAINQQMVAQALEWLDVQSTDRVLDLF CGMGNFTLPLAKRAKQVVGVEGVATLVENGLYNAHINALNNVEFFQHNLEDDVTRQPWAK LGFEKVLLDPARAGAAGVMTHIVKLAPEKVVYVSCNPTTLARDSKVLIAAGYRMERVRML DMFPHTGHLESMALFVAS >gi|316920349|gb|ADCU01000001.1| GENE 228 244463 - 246706 1969 747 aa, chain + ## HITS:1 COG:YPO3380 KEGG:ns NR:ns ## COG: YPO3380 COG0317 # Protein_GI_number: 16123529 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Yersinia pestis # 1 742 1 743 744 1337 88.0 0 MVAVRSAHLNTAGEFALDEWVKSLNLSNQQSCERLSATWRYCQQKTADHPDAALLLWRGV EMVEILSTLSMDNDSMRTALLFPLVEAKVIDRETVEEDFGKEITNLVHGVLEMDAIRALK ATQNDSGASEQVDNIRRMLLAMVEDFRCVVIKLAERIAHLREVKDAPEEERVLAAKECFN IYAPLANRLGIGQLKWELEDFCFRYLHPDEYKKIAKLLHERRIDREQFIDNFVEALRKEM AKEGVKAEIYGRPKHIYSIWRKMQKKALAFDELFDVRAVRIVVERLQDCYAALGIVHTHY RHLPNEFDDYVANPKPNGYQSIHTVVLGPRGKTLEIQIRTRQMHEDAELGVAAHWKYKEG PQAAGRSGYEGRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAG STPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLG YVTTSRGRAKIHNWFRKQDRDKNILAGRQILDDELERLDISLKEAEKLLIPRYNVNSMDE VLAAIGGGDIRVNQMVNFLQGKTNKPSAEEADREALKQLTQKGQSQSRSDKSSGRVVVEG VGNLMHHIARCCQPIPGDEIIGFITQGRGISIHRSDCDQLNELRSHAPERIIDAVWGESY SSGYSLVVRVMANDRSGLLRDITTILANEKVNVLGVASRSDTKKQLATIDMDIEIYNLQV LSRVLAKLNQLPDVIDARRLHGGKADK >gi|316920349|gb|ADCU01000001.1| GENE 229 247247 - 248071 376 274 aa, chain + ## HITS:1 COG:aq_563_2 KEGG:ns NR:ns ## COG: aq_563_2 COG2199 # Protein_GI_number: 15606018 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Aquifex aeolicus # 116 271 37 204 218 103 34.0 4e-22 MEDRANNEQLKESERQALQLSYSSYIKLLHEYNIPEKLKESEEITSNKLLNHVISAKGGN DNIIEFPQNTQCFRILIEESLCNIESAFHWKLILLIMIPFLISIVRTLHGLYYIDVFEKL NKDYYIDYLTKAYNRRYIPKIKKHNKLNYVLAIDIDNFKHINDSYGHDIGDKALYKCTKI MQRNIKASDIVVRMGGDEFLVFLFNASLQDAKHITTKILQDINGESLYISEQVTAKMTVS VGVAKFTDDISTTMKLADVNLYESKSRGKKQFTF >gi|316920349|gb|ADCU01000001.1| GENE 230 248084 - 250666 1421 860 aa, chain + ## HITS:1 COG:VC2750_4 KEGG:ns NR:ns ## COG: VC2750_4 COG2200 # Protein_GI_number: 15642743 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Vibrio cholerae # 607 853 4 250 259 216 40.0 1e-55 MIKNKLAFIENYSLKTIVLSVFVFFTTFMVIFILYLQFQQENHALNRMSEKVITSKGETV KSMLEHYINVPKQSNAAVATSLKAMDFSDPNDQMPVIKSMLLQTMGQIFSGDKYLSMVAL GTKDGHYISVGRNNVTDKEYLILKSRETKGKLNFYNGLSQSEAPRESIANYDVSRRPWFS YVNESKKATWTKAYRDFNSDSGISISYSSPAYDKNNHYIGVISSDLRLSRFSRYLMELTE NENNVIFIVNGSNQIIASSKDDFLISDTSFGIADQEGGGLLSVMDSSDPLIKSTVKILQN SPSDVERIESNGSMFFGKVMPVGNNLNLPGWRIVILSAQDDLTGDLRSNRIITIILSFII FAVGTLIAVKLLTMVTNPILDIARQAPLIARRKWKPQLNSQAQFSEIRVLNSSFMQMSDE LEGMFLKLEEQLNIDEETKLMTRRGLQGKLRECYEERSDFTIGLLAIVGLSNFNTITSSL GRRYGKDFVLRFIHDLQTILPVGTWLARDADERFIICYPGIKTQDFCVSEQHKFERFFRG MDTEHDTDGQVYAGNTGFVHDVMSPENLNESIMDAHIAFKFARSKGNGYSMLFHSDIRAE EIRNINMLRHLKSALSLNEFFLVFQPIVSLTTRNITGAECLIRWRNAELGMVGPDLFIPL AEDTGFIVPLGAWVIESACAQISEKLSGGEWPSDFKVHINISLIQLMQRDFIHTLFSTLA RHNVAPHNISIEITETSMMKETEILTTTIRTIRGMGVSISIDDFGSGFSSLSYLHKLEFD TLKIDKDFVSDVLEDSRNESIVSAVIRLADGFNVPLVAEGVETAEVADKLQAMGCQKAQG YYFARPMPLSEWPDIGKTLP >gi|316920349|gb|ADCU01000001.1| GENE 231 250758 - 251354 590 198 aa, chain - ## HITS:1 COG:paaY KEGG:ns NR:ns ## COG: paaY COG0663 # Protein_GI_number: 16129361 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli K12 # 1 195 1 195 196 305 76.0 3e-83 MPVYQIDGLTPVVDASSFVHPTAVLIGDVIIGKRVYIGPNASLRGDFGRIVVQDGANIQD NCVMHGFPQQDTVVEEDGHIGHGAILHGCRIRRNALVGMNAVVMDGADIGENTIVGAAAF VKAAAKFDGNKLVVGSPARVVRELGEQELSWKRAGTREYQDLVIRCQETLREVAPLREEE PDRKRLSFSGDVVPKGQI >gi|316920349|gb|ADCU01000001.1| GENE 232 251367 - 252308 790 313 aa, chain - ## HITS:1 COG:paaX KEGG:ns NR:ns ## COG: paaX COG3327 # Protein_GI_number: 16129360 # Func_class: K Transcription # Function: Phenylacetic acid-responsive transcriptional repressor # Organism: Escherichia coli K12 # 4 313 3 311 316 358 57.0 7e-99 MEHKIDEFIRHALDAQPISGTSLIISLYGDALSHRGGEVWLGSLSALLEPLGFGDRFVRT SVFRLQKEGWLDVEKIGRRSYYRVTERGMNQFRHAESKIYLSEQPAWDGQWDLLLLEMAS KTERARLKKALSWLGFGQMNATLMAAPAREQNDVPAMLGELNASESTIYFRADYPYNRSE QSLKELVSTSWSLNEVAEYYHEFITSFRPLMALLRDATEEELTPERCFQLRLLLIHYYRR VVLKDPLLPDALLPNQWEGQIARNLCINIYQRVDSQATRYVSEKTETTIGELPQPAAAYY RRFGGLPRENSTL >gi|316920349|gb|ADCU01000001.1| GENE 233 252424 - 253728 945 434 aa, chain - ## HITS:1 COG:paaK KEGG:ns NR:ns ## COG: paaK COG1541 # Protein_GI_number: 16129359 # Func_class: H Coenzyme transport and metabolism # Function: Coenzyme F390 synthetase # Organism: Escherichia coli K12 # 8 432 7 432 437 735 80.0 0 MTNPLPHIDPIEFASCDEIQALQLERMKWTLHHAYNNVPMYKHKFDAAGVHPDDFQQLSD IAKFPYTTKQDLRDNYPFDTFAVPMEQVVRVHASSGTTGRPTVVGYTQQDIDNWADIVAR SLRSAGATAKDKIHVAYGYGLFTGGLGAHYGAERLGATVIPMSGGQTEKQAQLILDFKPD VIMVTPSYCLTLIDELERKMGGDARGCSLRLGIFGAEPWTDSLRTEIETRMGIKALDIYG LSEVMGPGVAMECAEYADGPTIWEDHFYPEIIHPDSCQVLPDGEAGELVFTTLTKEAMPV IRYRTRDLTRLLPGTARHMRRMDKITGRSDDMLIIRGVNVFPSQLEEQIMKFRELSPHYQ LEVTRKGNLDNLSVKVELKEPNVLNHDQRCDICHQLRHHIKSMVGVSTQVSIVNCGDIPR SEGKAVRVVDCRQR >gi|316920349|gb|ADCU01000001.1| GENE 234 253809 - 255014 1126 401 aa, chain - ## HITS:1 COG:paaJ KEGG:ns NR:ns ## COG: paaJ COG0183 # Protein_GI_number: 16129358 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 401 1 401 401 592 77.0 1e-169 MIQAFICDGVRTPIGRYAGALANLRADDLAAIPLQALMARYPSLDWTCVDDVILGCANQA GEDNRNVARMAALLAGLPQTVSGTTINRLCGSGLDALAFAARCIKAGDAQLILAGGAESM TRAPLVMGKADSAFSRQAQIFDTTIGWRFVNPLMQGAFGSDSMPETAENVAAQFNISRDD QDAFALRSQQRTATAQAADVFAQEIVPVILNGKKGTEIRFTQDEHPRPETTFEQLQKLKT PFRMPGSVTAGNASGVNDGAAALIVASESMAHTQGLTPRARIVATATCGVEPRIMGIGPL PATRKVLELAGLSLNQMDVIELNEAFAAQSLAVMRQLGLPDDAEHVNPNGGAIALGHPLG MSGARLALAATFELERRGGRYALCTMCIGVGQGIAMIIERV >gi|316920349|gb|ADCU01000001.1| GENE 235 255011 - 255460 343 149 aa, chain - ## HITS:1 COG:paaI KEGG:ns NR:ns ## COG: paaI COG2050 # Protein_GI_number: 16129357 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 10 141 5 136 140 177 65.0 6e-45 MNALSPAQLAQRCAEQMFTHDTCAQAMGMTIDRVDSGFAQVSMTIMPNMLNGHQTCHGGQ LFSLADTAFAYACNSQGLAAVASGCSIDFIRPGFSGDRLTACAEVRHQGNKTGLYDVEIR NQDGKTIAWFRGRAHRLGHTLLKLQGEQP >gi|316920349|gb|ADCU01000001.1| GENE 236 255457 - 257013 1091 518 aa, chain - ## HITS:1 COG:ydbU KEGG:ns NR:ns ## COG: ydbU COG1250 # Protein_GI_number: 16129356 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 10 507 8 475 475 450 51.0 1e-126 MSSFLLQGPVAVIGAGTMGIGIAQVAAAAGHNVLLFDANVEASTRALTTLQQRLRQRVEA GKADANDTEQLLERIQVVTALSELAPCALAIEAIAERLDVKQSLFRDLEAICSQQTLFAS NTSSLSITAIASVLKHPQRMAGLHFFNPAPVMKLVEIVRGLETTQATLNLLQQLAVAWKK QPVICRSAPGFIVNRVARPFYAETLRALEEQVASPATLDAALRDAGGFAMGPLQLTDLIG QDVNYAVTESVFRAFGHDPRFQPSLVQQELVNAGHLGRKSGRGFYRYDSSSIQESPAFSC IENGSLPQRITAHGCWSSLPHFAALLQQNGIAIEEQKESAESAPFLRLDEVTFMLSKGKL SSEVAEEMRTPVVQFDLSANYQQASVITISAANCNTAAQTALVIRFLQSLGKNVIVLPDY PALLTLRTVAMLCNEALDALNKGIASAADLDLAMCRGVNYPLGPLAWGQQLGWQHILATL ENLNAFYAEPRYRPTSLLRQLAAGYVSLSFSATQDLIP >gi|316920349|gb|ADCU01000001.1| GENE 237 257016 - 257822 705 268 aa, chain - ## HITS:1 COG:paaG KEGG:ns NR:ns ## COG: paaG COG1024 # Protein_GI_number: 16129355 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 11 268 5 262 262 351 68.0 6e-97 MTSSIEIENMVLTHIEAGVLTITLNRPDRLNSFNDEMHGQLSAALKMAEQDENVRCVLLT GAGRGFCAGQDLNDRNVSVEQAAPDLGLSVERFYNPLIRRMTALPKPIVCAVNGVAAGAG AAIALACDIVIASNNASFIQSFCRLGLVLDSGGSWFLPRLAGHARAMGMALLGDKISAQQ ALEWGMIWQVVESEALAAHTQELAQRLATQPTYGLGLIKKAMYSAATNTLDQQLNLERDL QRLGGRSEDYREGVSAFFQKRQPEFKGK >gi|316920349|gb|ADCU01000001.1| GENE 238 257827 - 258600 622 257 aa, chain - ## HITS:1 COG:ydbS KEGG:ns NR:ns ## COG: ydbS COG1024 # Protein_GI_number: 16129354 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 6 257 4 255 255 280 61.0 2e-75 MNNDWILSHQQQRVLTLTLNRPEARNALSTECLEHLVQHLETADRNESIGAVVITGSEHC FAAGADLRELQQQTVASAIIDQRPLVWQRFNTINKPIIAAVNGYALGAGCELALACDIVI CGENARFGLPEITLGLIPGAGGTQRLLRSVGKSLASQMVLTGEAINGQQAMDSKLVSEIC VTELTLERAQQIAIRISQQSPLALRAAKSALRAAQETTLTQGLNLERQLFVSLSGTEDRA EGIAAFFAKRSPKFKGR >gi|316920349|gb|ADCU01000001.1| GENE 239 258610 - 259668 903 352 aa, chain - ## HITS:1 COG:paaE KEGG:ns NR:ns ## COG: paaE COG1018 # Protein_GI_number: 16129353 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 1 351 1 351 356 446 62.0 1e-125 MTVFHRLSIAAIERETPDAVAITLLVPDELKQHYHYKPGQHLTLKADLNGEELRRCYSIC SSPQEGILQIGVKAIHQGRFSTFVNQQLAVGDTLEVMLPQGRFGYQPSAERRGNYLAIAA GSGITPMLSIIKTTLLLEAESEFTLIYGNRTSRSVMFKEALCDLKNRFPQRLQILYLFSQ ESLDSPLLGGRIDSEHLSRIGKSLLDFSVFDHAFICGPESMMDDAQTTLEAAGMAAAHIH SERFNTAGVNVRPANVSEREQTLVAIQLDGRRLNIAMSAQDDSILDAALRQGADLPYACK GGVCATCKCKLKAGEVEMGVNYSLEPDQLAAGYILSCQSWPKGDGVVLDFDV >gi|316920349|gb|ADCU01000001.1| GENE 240 259684 - 260193 358 169 aa, chain - ## HITS:1 COG:paaD KEGG:ns NR:ns ## COG: paaD COG2151 # Protein_GI_number: 16129352 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Escherichia coli K12 # 5 169 4 167 167 207 61.0 9e-54 MELRQPLENLQSPEIHQIWQCLHAISDPELPVLSITDLGMVRGVTPSKKGWLVTFTPTYS GCPATEFLISAIQETLTEAGFSPVKVEICLTPAWTTDWMNAEAKNRLREYGVAPPQGLIC EKPLSTETVQCPRCGSHDTQKVSEFGSTACKALYRCKQCLEPFDYFKCI >gi|316920349|gb|ADCU01000001.1| GENE 241 260221 - 260982 651 253 aa, chain - ## HITS:1 COG:ydbP KEGG:ns NR:ns ## COG: ydbP COG3396 # Protein_GI_number: 16129351 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 8 253 4 248 248 314 65.0 1e-85 MTHSNQDLIQYVLRQADTPLILAQRLCAWCGHAPELEIDLALSNIGLDLLGQARNFYSYA AELSGEDIDEDRLAFGRDDLEYRNLLLAEQPNGGFNDTLVRQFFLDTYHFLLHQGLSQSR DPRLAAISAKSLKEAEYHLRFSRGWMIRLGDGTELSQQKMQQAINALWRFTGELFFSDEL ELQLAEQGIAVDPASLHAPWLQIVQQTLQEATLHLPEEAPYRRGGKQGKHTEHLGYMLAE MQFLQRAYPDCRW >gi|316920349|gb|ADCU01000001.1| GENE 242 260992 - 261279 334 95 aa, chain - ## HITS:1 COG:ynbF KEGG:ns NR:ns ## COG: ynbF COG3460 # Protein_GI_number: 16129350 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized enzyme of phenylacetate metabolism # Organism: Escherichia coli K12 # 1 95 1 95 95 161 76.0 2e-40 MNQAHWPLYEVFVRSKQGLAHRHVGSLHAADDQMALENARDAYTRRNEGCSIWVVKSEHL VASQPEDRAAFFDPSDDKIYRHPTFYTIPDGIKNM >gi|316920349|gb|ADCU01000001.1| GENE 243 261294 - 262238 855 314 aa, chain - ## HITS:1 COG:ydbO KEGG:ns NR:ns ## COG: ydbO COG3396 # Protein_GI_number: 16129349 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 11 306 7 302 309 500 78.0 1e-141 MTHNAQHQAIFDEKIAADTSIEAKDWMPDAYRQNLIRQIGQHAHSEVIGMLPEANWITRA PSLRRKAVLLAKVQDEAGHGLYLYSAAETLGCSRQDIYQKMLDGKMKYSSIFNYPTPSWA DVGVIGWLVDGAAIVNQVALCRASYGPYARAMIKVCKEESFHQRQGYEAVTVLANGSAEQ RAMLQDSINRFWWPVLMMFGPNDSDSPHSAQSMAWKIKRHSNDELRQKFVDNTVPQLEAL GMTAPDNDLCWDEATGHYRFGEIDWSEFYQVLKGQGICNYERLSAKRRAWEEGSWVREAA IVHAEKSAINTTAA >gi|316920349|gb|ADCU01000001.1| GENE 244 262558 - 264630 1497 690 aa, chain + ## HITS:1 COG:maoC_1 KEGG:ns NR:ns ## COG: maoC_1 COG1012 # Protein_GI_number: 16129348 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 507 1 500 500 647 68.0 0 MQQLTSYISGAWVYGQGKERAIQHAVSGTTLYQVCSDGLPLKDSLNYARQIGGKALSAMT FQQRAQMMKAIAKHLLANKESLYQISAETGATRADGWVDIEGGIATLFAYAGLAGRELPD DTLWPEDELIPLSKQSQFAARHVLTSRPGVALHINAFNFPCWGMLEKLAPTWLAGMPAII KPATASAQLTQAMVKLIIDSGLVPEGAIQLICGGIGDIFEHLDYHDAVTFTGSAQTGKKL RSHPRLLEKSIAFTMEADSLNCCILGEDVTPDMPEFAIFIKEVVREMTTKAGQKCTAIRR VIVPAAQMEAVQHALLKRLSGVTVGDPANPEVRMGALINLEQRDDVQEKVDDLLHNGCEP LCGGSLSALKLTGNGAENGAFYPPTLLYCADPFHHLTVHDTEAFGPVATLMPYQNRQQAI ELALLGQGSLAGSLVTADERIAAEVIRATACAHGRMLILDRNSAVESTGHGSPLPMLVHG GPGRAGGGEELGGLRAVKHYMQRTAIQGSPSMLASIGREWVRGASVIEEQVHPFRKYFEQ LSIGESLLTARRTITEADIVNFGCLSGDHFYAHMDKIGAAESLFGERVAHGYFVVSAAAG LFVDPGVGPVIANYGMENLRFIEPVKIGDTIQVRLTCKKKIKKVQKTAEDKPHGVVVWDV QVLNQHQQPVALYSILTLVARQNGDFIPSA >gi|316920349|gb|ADCU01000001.1| GENE 245 264717 - 265496 951 259 aa, chain + ## HITS:1 COG:YPO3378 KEGG:ns NR:ns ## COG: YPO3378 COG1694 # Protein_GI_number: 16123527 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Yersinia pestis # 1 259 15 279 280 392 81.0 1e-109 MQRLLTIMQTLRDPERGCPWDQKQTFATIAPYTLEETYEVLDAIQREDFKDLREELGDLL FQVVFYAQMGQEQGLFNFDDVCNAISDKLERRHPHVFATEHHESAEASLARWEQRKAEER AEKDLSSSMDDIPNALPALMKAYKIQKRCAAVGFDWDTLGPVLDKVYEEIDEVMDEAQQA VVDEEKLGEEIGDLLFATVNLSRHLGHKAENALQAANRKFERRFRAVEDAVRASGKTMEE ATLDEMEAHWQQVKKAEAK >gi|316920349|gb|ADCU01000001.1| GENE 246 265791 - 267428 1615 545 aa, chain + ## HITS:1 COG:YPO3377 KEGG:ns NR:ns ## COG: YPO3377 COG0504 # Protein_GI_number: 16123526 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Yersinia pestis # 1 545 1 545 545 1033 92.0 0 MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVSMMKLDPYINVDPGTMSPIQHGEV FVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHIT NAIKERILEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEVGREHTMYMHLTLVPYM AAAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRAVPANERAKIALFCNVPEKAVISLKD VDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLAEWEQVIYEEANPGGEVTIGMVGKYIE LPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETKGVELLKGLDAILVPGGFGYRGIEG KIATARYARENNIPYLGICLGMQVALMEFARNVAGMPDANSTEFVPDCKYPVVALISEWR DEEGNVEVRTEESDLGGTMRLGGQQCNLVEGSLVRQMYGSPTIVERHRHRYEVNNMLLKQ IEDAGLRVTGRSADNKLVEIIELPNHPWFVASQFHPEFTSTPRDGHPLFAGFVKAAGEYQ KRQAK >gi|316920349|gb|ADCU01000001.1| GENE 247 267512 - 268816 1398 434 aa, chain + ## HITS:1 COG:YPO3376 KEGG:ns NR:ns ## COG: YPO3376 COG0148 # Protein_GI_number: 16123525 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Yersinia pestis # 1 434 1 431 431 726 95.0 0 MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFM GKGVLKAVAAVNGPIAQAVMGKDAKDQANIDKIMIDLDGTENKSKFGANAILAVSLAAAK AAAASKGLPLYAHIAELNGTPGKYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLK EAVRIGSEVFHNLAKVLKSKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKD VTLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWTG FKYQTDVLGNKIQLVGDDLFVTNTKILKEGIEKGVANSILIKFNQIGSLTETLAAIKMAK DAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALAAAG TPAPFNGLKEVKGQ >gi|316920349|gb|ADCU01000001.1| GENE 248 268940 - 269167 150 75 aa, chain - ## HITS:1 COG:PM1568 KEGG:ns NR:ns ## COG: PM1568 COG2841 # Protein_GI_number: 15603433 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pasteurella multocida # 1 70 1 70 70 63 51.0 1e-10 MFPEYRDLISRLKTEDVRFATLFHEHNQLDHTIRRAENQPRAPFNEQIASMKREKLRLKD ELYQILKSYEDEATT >gi|316920349|gb|ADCU01000001.1| GENE 249 269521 - 270291 718 256 aa, chain + ## HITS:1 COG:NMB1612 KEGG:ns NR:ns ## COG: NMB1612 COG0834 # Protein_GI_number: 15677462 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Neisseria meningitidis MC58 # 25 246 37 259 268 187 42.0 1e-47 MLKKMILAGCFAAAMVSGMTMAAQQTYVVGSGGTYRPFEFENSQKQLEGFDIDIIKAIAK AENFDIKLVNTPWEGIFATLSSGDRDIIISGITITDKRQKMVDFSTPYFPAEQSIVVPSG SKVDSVNALKGQKVGVVNSSTGDIVVSDVLGKNSTDIKRFDNTPLMLQELYEDGLGAAVG DVGVVKYYIKNHPEKAFKLVPDSKFERQYFGIAVAKGNQELLGKINAGLQKIVADGTYAK IYTQWFDANVPVLPTK >gi|316920349|gb|ADCU01000001.1| GENE 250 270398 - 271162 645 254 aa, chain + ## HITS:1 COG:NMA1709 KEGG:ns NR:ns ## COG: NMA1709 COG0765 # Protein_GI_number: 15794602 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Neisseria meningitidis Z2491 # 4 247 3 242 248 177 44.0 2e-44 MTGFRWEIIQEYAPLFAEGAWMTIKCTIICVILGTLWGLTLGLGRMAKAENGPWRIVLRY FVQWPVRVYVSAFRGTPLFVQIMVVHFALVPLLINPRDGVLVTSGLMSADFARMLRSDYG AFLSCIVAITLNAGAYVSEIFRAGIQSIDHGQMEASRALGMSWGKTMRKVILPQAFRRIL PPLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISVIYWMLTFILSLL VQHMEKRLSKSDSR >gi|316920349|gb|ADCU01000001.1| GENE 251 271149 - 271871 618 240 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 242 50 2e-62 MIHVDNLQKQFGETHVLRGISCEIKPQEVVCIIGPSGSGKSTFLRCLNALEKPDGGEVSV NGFDVHNPKTNLNKMRESVGMVFQRFNLFPHMTVLDNLIMAPMSVKGMSRADALKRAEIL LDKVGLLDKIDAWPASLSGGQQQRVAIARSMAMDPSIILFDEPTSALDPELVGEVLEVMK KLAQEGMTMVIVTHEMGFAREVADRVVFIDQGIIQEQGTPEQIFTAPQNPRTAAFLSKVL >gi|316920349|gb|ADCU01000001.1| GENE 252 271922 - 273355 1031 477 aa, chain - ## HITS:1 COG:YPO4015 KEGG:ns NR:ns ## COG: YPO4015 COG1113 # Protein_GI_number: 16124138 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 13 460 3 450 467 655 80.0 0 MQNNNETSALQPHNPSHLKRGLNARHIRFLALGSAIGTGLFYGSAGAIQLAGPAVLLAYL VGGLAVFMVMRALGEMAVHQPVSGSFGHYASRYLGPLAGFITGWTYTFEMVIVGMADVTA FGIYMGLWFPDVSQWIWVLSVVCFIGALNLCSVKVFGEMEFWLSLIKVVAIVAMIVGGAA IMMFGFGQHEQATGFSNLWQHGGFMPNGITGVIASLAVVMFAFGGIEIIGVTASEARDPA KVIPKAINTVPVRILLFYVLTLMVLMAIYPWNSIGQHGSPFVEIFKSLGISSAAHVLNVV VITAAISAINSDIFGAGRMMYGMAQDGQAPKCFTKLTAGGVPWMTVLVMAIALLTGVVLN YLIPEKVFLIIASIATFATVWVWLMILLSQVAMRRQMSKEEAATLKFPVPFWPLAPALTI AFMAFVIALLGYFEDSRVALAVGLVWMAFLTLAWWMWVRKPKNAELNNFTTETETEI >gi|316920349|gb|ADCU01000001.1| GENE 253 273520 - 275055 1471 511 aa, chain - ## HITS:1 COG:YPO4016 KEGG:ns NR:ns ## COG: YPO4016 COG2986 # Protein_GI_number: 16124139 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Yersinia pestis # 1 509 1 509 510 757 79.0 0 MYELMLQPGKITLSQLREIYHHPVHIQLHSSARDPIRQSVACVERIVAEGRTAYGINTGF GLLASTRIEACDLENLQRSIVLSHAAGVGSANDDAVVRLIMVMKINSLARGFSGIREEVL DALIALVNAEVYPHIPVKGSVGASGDLAPLAHMSLVLLGEGQARYQGEWLPATQALEKAG LKPIQLAAKEGLALLNGTQVSTAYALRGLFDAEDMFASALVCGGLTVEAVLGSRSPFDAR IHEVRGQIGQIDSAAAYRHLLGERSEVSDSHHNCGKVQDPYSLRCQPQVMGACLTQIRHA AAVLEIEANAVSDNPLVFAEQNDVVSGGNFHAEPVAMAADNLALALAEIGALSERRTSLM MDKHMSQLPPFLVNNGGVNSGFMIAQVTAAALASENKALAHPSSVDSLPTSANQEDHVSM APAAGRRLWEMAENVRGILAIEWLSACQGLDFRNGLKTSPRLEQARQLLRESVAYYDKDR FFAPDIEAASQLLGSGQLKALIPTALLPSQA >gi|316920349|gb|ADCU01000001.1| GENE 254 275055 - 276743 1464 562 aa, chain - ## HITS:1 COG:YPO4017 KEGG:ns NR:ns ## COG: YPO4017 COG2987 # Protein_GI_number: 16124140 # Func_class: E Amino acid transport and metabolism # Function: Urocanate hydratase # Organism: Yersinia pestis # 1 562 1 562 563 1049 88.0 0 MTLPNRLREIDIRAPRGTQLTAKSWQTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAAR NWECYDKIVESLKNLNDDETLLVQSGKPVGVFKTHSNAPRVLIANSNLVPHWATWEHFNE LDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYNGDLTGRWVLTAGLGGMGG AQPLAATMAGLTSLNIECQQSRIDFRLKTGYVDEQATNLDDALARIKRYTEAGKAISIAL CGNAAEILPELVRRGIHPDMVTDQTSAHDPLNGYLPKGWTWEEYRERAQSEPALVVNAAK ESMAEHVVAMLAFQKMDIPTFDYGNNIRQMAKEMGVANAFDFPGFVPAYIRPLFCRGVGP FRWAALSGNPEDIYKTDAMVKELIPDDEHLHHWLDMARERIHFQGLPARICWVGLGQRAK LGLAFNEMVRSGALSAPIVIGRDHLDSGSVASPNRETESMQDGSDAVSDWPLLNALLNTA SGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAERIARVLHNDPATGVMRHADAGYEI AIECAREQGLNLPMITSVQGKK >gi|316920349|gb|ADCU01000001.1| GENE 255 277098 - 277553 415 151 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|238755855|ref|ZP_04617185.1| ## NR: gi|238755855|ref|ZP_04617185.1| hypothetical protein yruck0001_11520 [Yersinia ruckeri ATCC 29473] # 1 146 1 149 152 150 53.0 3e-35 MDLIKKMCGSFDFTAISAELYALLPQDKMDVERAKKAVDYGYPGVAPILPVLIYWMQDLN WPVAQELAPFLAQIGAPLKQPVLYVLKSQDTIWKYWVISQLVNTDDLRLAKAIGPELQHL QLKTAGSADEDDLSVHAVTTDVLNKLQAQHP >gi|316920349|gb|ADCU01000001.1| GENE 256 277566 - 277910 338 114 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPNYYRLGNRTPANFTPRIADTVGPGAGLSMANAAPAARAQVIDSALTQDTQILNTPTHT NPQHYSILPNPNVGNNLLDWANTREAILIDNTWTNPLIGVYTTDVNNARTGQVN >gi|316920349|gb|ADCU01000001.1| GENE 257 277982 - 278908 880 308 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGKSPTIEEMEKKDKKSREYLDEIANELTNKLGNTYSALEKEAENFYTKEHDKPWSSDLY ITGKQFDYQSVQEWSLASVSAIINKISAAVIGTVDGKVENLPAGTDAGDKAQDINKKYDM NKDKRLLIATNCFNLLAGIVGSFGNATSITVKHGTKSDPIGGGLRIFGSVGTQTFQRSSF FKNEKIATYQFAYIVRFSVEEFELQAKIALIDQYQNTLNVTKFASDKNDQQFFEDKITYE QWSVMSAKFEKVMEDVLKKIQELDPKKERGTLLAKAFIVHNSLYKFLYSSNKHLMDALAK KEVSLLKI >gi|316920349|gb|ADCU01000001.1| GENE 258 279230 - 280084 981 284 aa, chain - ## HITS:1 COG:YPO3082 KEGG:ns NR:ns ## COG: YPO3082 COG3118 # Protein_GI_number: 16123259 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Yersinia pestis # 1 284 1 289 289 378 75.0 1e-105 MLNNSVINVTEANLHQTLEQSASIPVLFYFWSERSQHCLQLNPILDKLASEYAGQFVLAK VDCDAEQMVASQFGLRAIPTVYLFKDGQPVDGFQGPQPEEFIRELLGRFLPKEEELKAAQ AAELIAEGKMAEALPLLKEARALDPKRSDIALSLAEVQIALNRSDDAEAILATIPLQDQD SRYHGLVAQIELLKQAADTPEIQQLQKQVEAEPENAIIAVQLALQLHQVGRNEEALELLM THLRKDLAAADGAARKTLMDILAALGNGDALASKYRKQLYSLLY >gi|316920349|gb|ADCU01000001.1| GENE 259 280156 - 280929 708 257 aa, chain - ## HITS:1 COG:YPO3081 KEGG:ns NR:ns ## COG: YPO3081 COG1028 # Protein_GI_number: 16123258 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Yersinia pestis # 1 257 1 257 258 421 81.0 1e-118 MQKAILITGCSSGIGLTAAQDLRNRGYRVLAACRKPQDVEVMRDLGMEGIELDLDDSASV ERAAAEVIRLTEGRLYALFNNGGFGLYGPLNTISRSELERQFATNLFGTHQLTQLLLPIM LPHGEGRIIQTSSVMGLVATPGRGAYAASKFALEGWSDALRMELHGSGIHVSLIEPGPIN TRFTKNVHQMDKDKPVTNPGIAARFTLTPDAILPKLHHALESHKPKLRYPVTLVAHALTV LRRILPGRMLDKILSGN >gi|316920349|gb|ADCU01000001.1| GENE 260 280984 - 281622 392 212 aa, chain - ## HITS:1 COG:YPO3080 KEGG:ns NR:ns ## COG: YPO3080 COG2755 # Protein_GI_number: 16123257 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Yersinia pestis # 1 209 2 210 212 273 69.0 2e-73 MNFKNIFRWHIPFLLLFSLLCGRAMAADTLLILGDSLSAGYQLSVADSWAARMAQQWQKL TPPITVVNASISGDTAEQGLARLPALLKQHQPRWVLIELGANDGLRGFAPADIEANLDKI ITQLQQAKTQPLLMQIRLPPNYGRRYTETFAAMYPQLAKRYQIPLIPFYMEQVALKPEWM QQDGLHPNGDAQAFIAQWMSEQLRPLLTNTHQ >gi|316920349|gb|ADCU01000001.1| GENE 261 281593 - 282279 313 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 25 221 20 215 223 125 35 6e-27 MPTENVLEVHHLAKQVGQGESQLSILTGVELVVKPAQTLALVGESGSGKSTLLGILAGLD DGTSGEVSLLGQRLDLMDEEKRAALRAKDVGFVFQSFMLVPTLTALENVQLPALLRGDSE RQSRQQAVQLLEQLGLGKRLNHLPAQLSGGEQQRVALARAFSGRPKVLFADEPTGNLDRH TGDRIAELLFSLNTDFDTTLILVTHDPQLAARCQRRMRLVEGVLQEEA >gi|316920349|gb|ADCU01000001.1| GENE 262 282276 - 284681 1937 801 aa, chain + ## HITS:1 COG:YPO3078 KEGG:ns NR:ns ## COG: YPO3078 COG3127 # Protein_GI_number: 16123255 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component # Organism: Yersinia pestis # 1 800 1 800 809 1050 73.0 0 MILRWFWREWKSPSLLIVWMALTLAVACVLALGSISDRMERGLSQQSRDFLAGDKVLRSA HPANEDWLTQAKSDGLTVSRQLSFTTMTFAGDRPQLADVKATDTLYPLYGELITRPAGLR PEPGEVLVASRLQALLNLKIGDDLDVGDTTLKVAGVVVQEPDNGFNPFQTAPRILINLAD VEKTGAIQPGSRLSYRYMFAGPADAIQRFTQYLTPQLKADQKLFGLEESGGTLGKSLQRS QQFLLLSALLTLLLAVAAVTVAMNHYCRSRYELVAILKTLGAGRKTLLRLIAGQWLALLL VSGGAGSVLGLLFESLLIRLLAPVLPAELPAASGWPWVWALGGMALISLIVGLRPYRQLM ATQPLRVLRSDAFRVVWPLRYYLPITALILVAGLVALVGLSTLLWSLLLGMLALALLLSV VGWGGLILLRRLTLKNLALRLAVNRLLRQPAATISQLAAFSLSFMLLALLLVLRGDLLDR WQQQLPPDSPNYFLLNMTEQQVPQVRTFLGQHQVEARTFYPVVRVRLTEINGQQATKLIA EDAPGGEAVNRELNLTWQTDLPEHNPLTAGYWPPNVGEVSIEQGIAERLGLGLGDEVSFS GDTQSFSAKITSLRKVDWESLRPNFYFIFPPHALDNQPQTWLTSFRYTGDERLLTQLNRQ FPTLSLLDIGAILQQAGQVLQQVSRALEVMVILVIICGVLLLMAQVQVGMQQRRQELTVY RTLGAGMRLLRRTLWSEFALLGLVSGIAAAAGAEAALWLLQRQVFDFPWEPNYLMWFLVP ISGAILLSLCGGFLGSRLLKR >gi|316920349|gb|ADCU01000001.1| GENE 263 284925 - 286343 535 472 aa, chain + ## HITS:1 COG:ycdT_2 KEGG:ns NR:ns ## COG: ycdT_2 COG2199 # Protein_GI_number: 16128989 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 256 450 6 192 202 145 37.0 2e-34 MDRVGIENESVKINRFTIFSFAILTALFIFFRQYGYLRMPALEALFPVSTSVILVLHGLL ALFMLMKFNFERNHLYLVVLAFVYGVSSIYLVSKLLSYPGVVFTEGGLGTNANDMAIYFI FRSATMAILILFSLLVYRLRHKSFINIYLVVGCCLFLTSLSFLLAYFVSSHSEVLALSIV DEKHLTYDNFWSSAIGLYLVILWGVTSSSVIFFAGARSGFWASLSLSCIAFLGSTLLLSG SNYLASLAWYGAHLFEVLATFIVMLAFLFDIFKLYQKARSDYQISYNNSIRDPMTRLYNR SYYYDVLIQRMKTVSEQEPITLLVADIDHFKRVNDVYGHVTGDRVIQYVAKTLEYSIRKT DIAARIGGEEFSIMLNGIGRADAVLLADRIRMSISDHMNSPFAQDVPDKVTISIGVYTVT DNALGAEQCVAYADAAMYQAKQEGRDRVVLYSARASELMGDKNRGTLEPAHV >gi|316920349|gb|ADCU01000001.1| GENE 264 286395 - 287465 854 356 aa, chain - ## HITS:1 COG:YPO3077 KEGG:ns NR:ns ## COG: YPO3077 COG0026 # Protein_GI_number: 16123254 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Yersinia pestis # 1 354 1 354 354 565 78.0 1e-161 MKPVCVLGNGQLGRMLRQAGEPLGITVFPVGLDVDPEAVPWQQGVITAEIERWPETPLTR ELARHNGFVNRDIFPRLADRLTQKQLLDELTLATAPWQLLSSAGEWPTIFSNIGQFAIVK RRTGGYDGRGQWRIRPGDESQLPADAYGECIVEQGINFSGEVSLVGARARDGHCVFYPLT HNLHEEGILRTSVALPQPNPQLQQQAEQMLSALMNALNYVGVMAMECFIVDDSLLINELA PRVHNSGHWTQNGASISQFELHLRAILDLPLPTPVVSTPSVMINLIGTELNYDWLAWPLI HLHWYDKEVRAGRKVGHLNLNDRDPVLLAETLQAISSHLPSEYQSGLVWAQEKLAS >gi|316920349|gb|ADCU01000001.1| GENE 265 287462 - 287986 605 174 aa, chain - ## HITS:1 COG:YPO3076 KEGG:ns NR:ns ## COG: YPO3076 COG0041 # Protein_GI_number: 16123253 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Yersinia pestis # 1 174 1 174 174 220 83.0 1e-57 MPANVVPANPSGAKIAIVMGSKSDWATMQFAAEVLTQLDVKFHVEVVSAHRTPDKLFSFA EQASEQGFDVIIAGAGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIP VGTLAIGKAGAANAGLLAAQILALHDPMLARRMAAWRQAQTDEVLAHPDPREEA >gi|316920349|gb|ADCU01000001.1| GENE 266 288301 - 288852 393 183 aa, chain + ## HITS:1 COG:ECs1768 KEGG:ns NR:ns ## COG: ECs1768 COG5529 # Protein_GI_number: 15831022 # Func_class: R General function prediction only # Function: Pyocin large subunit # Organism: Escherichia coli O157:H7 # 70 156 177 265 346 76 43.0 2e-14 MSVKILASAITSLDTFSRDPETALKSGDRGVITVLDNNMPIFYAVTPERMAELLAFEEAA SRANSDVVLEECLFSDEAVAPTVANIPTPLGKFVMYPGWQPDTDFLRMAAMWGCILTAPV TPTELASFVAYWQAEGKAFHHVQWQQKLARSIQQNRMSNGGQPKRDINDIGEQDYSIPKG FRG >gi|316920349|gb|ADCU01000001.1| GENE 267 288855 - 289601 758 248 aa, chain + ## HITS:1 COG:STM4543 KEGG:ns NR:ns ## COG: STM4543 COG1484 # Protein_GI_number: 16767787 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Salmonella typhimurium LT2 # 8 248 6 245 245 357 75.0 9e-99 MKDAASMNLMQRLKKMMPAHVSPKFTNAEEWRIWQEEEGRKRSEAISRENQAMKMQRVFK RSGIRPLHMNCSFDNYRVECEGQRIALERARQYAAEFDGNIASFVFSGKPGTGKNHLAAA IGNDLILRNKSVLIVTVADLMSSMKGTFSGNSDTTEERLLEDLSAVDLLVIDEIGVQTES RYEKVIINQIVDRRSSSKRPTGMLSNLNVQSMNTLLGERVMDRMSLGNSLWVNFDWESYR SRVVGNEY >gi|316920349|gb|ADCU01000001.1| GENE 268 289629 - 290354 495 241 aa, chain - ## HITS:1 COG:YPO3075 KEGG:ns NR:ns ## COG: YPO3075 COG2908 # Protein_GI_number: 16123252 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 241 1 240 240 358 68.0 7e-99 MRTLFIADLHLSEQEPAITAGFLRFLQREAYQADALYILGDFFEYWIGDDDPQPLHREIS SALHDLTNSGVPCYFIHGNRDFLIGKRFAQECGMTLLPQEKRLSLYGHPILIMHGDTLCT DDVDYQRYRRKVNNPFIQKLFSWLPLRTRLNIAAKMRDRSQMTNDGKSEAIMDVNQQAVI EALERNQAEWLIHGHTHRPAIHNVDMPNGKLAKRAVLGAWHYQGSMISVTPEGIELIEFP F >gi|316920349|gb|ADCU01000001.1| GENE 269 290365 - 290859 542 164 aa, chain - ## HITS:1 COG:YPO3074 KEGG:ns NR:ns ## COG: YPO3074 COG0652 # Protein_GI_number: 16123251 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Yersinia pestis # 1 164 1 164 164 296 89.0 1e-80 MVTFHTNHGDIVIKTFDDKAPATVANFLEYCREGFYDNTIFHRVINSFMIQGGGFEPGMK QKETKAPIKNEANNGLKNTRGTLAMARTNDPHSATAQFFINVVDNDFLNFRSERPDGWGY AVFAEVVEGLDVVDKIKAVSTGRSGMHQDVPREDVIIKSVTVSE >gi|316920349|gb|ADCU01000001.1| GENE 270 291147 - 292532 1568 461 aa, chain + ## HITS:1 COG:YPO3073 KEGG:ns NR:ns ## COG: YPO3073 COG0215 # Protein_GI_number: 16123250 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Yersinia pestis # 1 461 1 461 461 868 88.0 0 MLKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYN LKYVRNVTDVDDKIIKRALENGETCDQLTERMLAEMHKDFDSLNIARPDLEPRATHHIPE IIEIVEQLITRGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVADVKRNPMD FVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIA QSSCAHDGPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLEHYDAETVRYFLMSGHYRS QLNYSEENLKQARSALERLYTALRGTEPQAEPAGGDVFEARFREAMDDDFNTPEAYSALF DLAREVNRLKSEDMAQANALAAELRKLAKILGLLEQDPEVFLQGGAQADDSEVAQIEALI KQRNDARAAKDWAMADSARDQLNALGIVLEDGPQGTTWRRK >gi|316920349|gb|ADCU01000001.1| GENE 271 292598 - 292810 332 70 aa, chain - ## HITS:1 COG:YPO2825 KEGG:ns NR:ns ## COG: YPO2825 COG2501 # Protein_GI_number: 16123022 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 70 1 70 70 112 78.0 2e-25 MEIFQLENHPHVELCDLLKLQGWNDSGASAKNAIADGYVKVDGKIETRKRCKIIDGQTVT YNGQSVQVKA >gi|316920349|gb|ADCU01000001.1| GENE 272 293037 - 294404 1267 455 aa, chain - ## HITS:1 COG:STM4519 KEGG:ns NR:ns ## COG: STM4519 COG1012 # Protein_GI_number: 16767763 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 454 1 454 456 647 70.0 0 MPYQTINPYTDKLIKEYPQHDDNYVESALATAHQLYKSDWAQGDISQRLAVLTQLAELFT QHEEELAKTISQEMGKLIEQSRGEVKICAAIAKYYADNAKALLKPVKYPSKLGDAWVENH PIGIIMAVEPWNFPFYQLMRVLAPNMAVGNSVMVKHASIVPHCAETFERMVSQAGAPKGA YTNLFISQDQVAKIIDDDRVSGVALTGSEQAGSVVAAQAAKNLKKSTMELGGNDVFVVLN DCDLDKAIKVGAQARLQNAGQVCTAAKRFIVHEKVADKFMAGFTQALESVKTGDPLDPQT TLGPLSSKGALQNLVKQVDKAVKNGAKVKLGGKALDHAGYFYAPTILTDIKRENPAYFEE FFGPVAMIFVVKNDDEAVKLANDSHYGLGGAIFTGDIERGKKMASRIETGMVFINTLSGT APELPFGGVKRSGYGHELADLGIKEFVNQKLVVVA >gi|316920349|gb|ADCU01000001.1| GENE 273 294693 - 295550 779 285 aa, chain - ## HITS:1 COG:YPO2824 KEGG:ns NR:ns ## COG: YPO2824 COG0190 # Protein_GI_number: 16123021 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Yersinia pestis # 1 285 1 285 288 491 84.0 1e-139 MAAKIIDGKTIAQQVRSEMAVRVQQRLAEGKRAPGLAVILVGDNPASQIYVGSKRRACEE VGIVSKSYDLPISTSEEQLLSLIDDLNADNTIDGILVQLPLPAGIDNVKVLERISPDKDV DGFHPYNVGRLCQRSPKLRPCTPRGIITMLERCEINTYGLNAVVVGASNIVGRPMGLELL LAGCTTTITHRFTKDLQKHVENADLVVVAVGKPGFIPGAWIKPGAVVIDVGINRLESGKV VGDVEFDVAVERASWITPVPGGVGPMTVATLIQNTLQACEEFHDI >gi|316920349|gb|ADCU01000001.1| GENE 274 296158 - 296457 121 99 aa, chain + ## HITS:1 COG:STM1643 KEGG:ns NR:ns ## COG: STM1643 COG3791 # Protein_GI_number: 16764987 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 98 38 136 149 164 76.0 5e-41 MRGAIAVSAPLSGIEIIRGKDKLTEYRFNTQQAVHFFCSVCGIYTFHQRRSNPEQYGVNV ACIENVSPFDFPSVAVMEGTHHPKDGGGGIAGYLTYKPL >gi|316920349|gb|ADCU01000001.1| GENE 275 296907 - 298019 620 370 aa, chain + ## HITS:1 COG:PA5471 KEGG:ns NR:ns ## COG: PA5471 COG1690 # Protein_GI_number: 15600664 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 1 368 1 376 379 486 63.0 1e-137 MSNIIRSVSPRVSYIASEHTWIEGKAIQQLETTANLPDMIQVTGMPDLHPGRGYPVGAAF FSQHRFYPALIGNDIGCGMSVWLTDLAVAKQSLDKLEKRLGNIDGPLEEHLLADIPAEFS HCYSLGTIGGGNHFAEFLQIDEIFTPFSALDKKRLILLVHSGSRGLGQAILEAHIREYGH HGLEQDSPESGDYLNQHQHALDFAVCNRHFIARRIMERLRTDGQQLLDIAHNFLQKTSVN GIDGWLHRKGATPSDRGLVVIPGSRGDFSYLVEPHPDAESLFSLAHGAGRKWMRSECKDR LSAKFTVDQMSRTHFGSRVICRDRQLIYQEAPQAYKPIDTIVDSLQQAGLITVVARLKPV LTYKTSGETV >gi|316920349|gb|ADCU01000001.1| GENE 276 298016 - 298633 365 205 aa, chain + ## HITS:1 COG:STM0315 KEGG:ns NR:ns ## COG: STM0315 COG1186 # Protein_GI_number: 16763697 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Salmonella typhimurium LT2 # 1 203 1 203 204 259 64.0 3e-69 MILLQISSAQGPDECALAVALALKQLQKEAAALGVKVTVAEQEPARRAGTLRSVLLSLDG DAAEHISNTWCGTLQWTCESPWRGGNGRKNWFIGVARYCFEDVVIEGEIKFESLKSSGPG GQHVNKTESAIRATHLASGIVVKVQTERSQHANKRLAKLLIAHKLEQQQQNMQSEIKAQR RMFHHQITRGNPVRMFKGPDFTPVK >gi|316920349|gb|ADCU01000001.1| GENE 277 298948 - 299208 114 86 aa, chain + ## HITS:1 COG:no KEGG:PC1_0372 NR:ns ## KEGG: PC1_0372 # Name: not_defined # Def: putative PAS/PAC sensor protein # Organism: P.carotovorum # Pathway: not_defined # 18 86 17 85 221 72 43.0 4e-12 MAGSGVVIEKQASSLIEFGWTIKNSLSKYIYVNDLACSHFNTSSKEIIGYSDIDLVPDIG DFYKYIRNDDKKIIANQKMSVALKIF >gi|316920349|gb|ADCU01000001.1| GENE 278 299534 - 300139 532 201 aa, chain + ## HITS:1 COG:ECs2010 KEGG:ns NR:ns ## COG: ECs2010 COG0558 # Protein_GI_number: 15831264 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Escherichia coli O157:H7 # 1 195 3 197 203 280 75.0 1e-75 MTLYQIKPAFQGLLRPLMFLLYRHRITANHITLAAMVLSFITGALLIAFPRPSLFILLPI VLFVRMALNALDGMLARECNQKSRLGAILNETGDVLSDIALYLPFMLLPDSNIPLVLVML FCAVMTEFCGVLAQTINGIRSYTGPLGKSDRALVFGTWGLALAIWPQLVQWNNVMWGIAT VLLVWTVINRCRSVLRDEVAK >gi|316920349|gb|ADCU01000001.1| GENE 279 300136 - 301053 651 305 aa, chain + ## HITS:1 COG:YPO2816 KEGG:ns NR:ns ## COG: YPO2816 COG4589 # Protein_GI_number: 16123013 # Func_class: R General function prediction only # Function: Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase # Organism: Yersinia pestis # 1 303 5 307 309 380 67.0 1e-105 MMMLEKSLAVVFAILLAATVVNGLLVLLRPSKDWRELTLRIRTWWVIIILFSLALLSPHW LALIFFALVSFMALKEFLTLVPSRQSDRMPLLWMFVVIPINYWLIGIGWYGMFVVFIPIY VFLFLPARMVIAGDTQGFLRTASQLHWSLMTTVFAFSHVAFLLMLPADGKQTGALLVLFL VGLTEFNDIAQYLWGKSLGRIRVTPKVSPNKTLAGLLGGVVTTALVAAVLGPLLTPLAWP MALLAGVIIGITGFCGDVVMSAIKRDIGVKDSGTLLPGHGGILDRLDSLIFTAPVFFHFI RYFCY >gi|316920349|gb|ADCU01000001.1| GENE 280 301057 - 301698 440 213 aa, chain + ## HITS:1 COG:YPO2815 KEGG:ns NR:ns ## COG: YPO2815 COG0204 # Protein_GI_number: 16123012 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Yersinia pestis # 2 211 1 210 210 250 54.0 2e-66 MMTRILRLLFSLCIVWPVIWLWLGLRVKHRETLPKSGPAIVVANHNSHMDVFALLSLFPL CRQAEVHPVAAADYFLRNKWMAWFALNILNIIPISRKGGEANPLALCEQALREGKTLILF PEGSRGEPGKLSPLKSGLWHLSQSMPEVPIIPVWLRGTEQVMAKGNRIPLPLFIDVNIGD ALSFNRDKKVFMDDLKHQLLALSQQTTGNNSHD >gi|316920349|gb|ADCU01000001.1| GENE 281 301691 - 303451 1434 586 aa, chain + ## HITS:1 COG:ynbC_2 KEGG:ns NR:ns ## COG: ynbC_2 COG0500 # Protein_GI_number: 16129371 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 276 584 1 309 311 471 73.0 1e-132 MINTRTPDERQFLTSDNTELFYRYWPATSAGVTPKVIVLFHRGHEHSGRLQHIVDELAMP DTAFYAWDARGHGCSPGQRGYSPSLARSVQDVDEFVRFAAADSQASMEDVVVVAQSVGAV LAATWAHDYAPTIRGLVLASPAFKVKLYVPFARPGLALMHRLRGLFFVNSYVKGKYLTHD SERVESFNHDPLITRPIAVNILLDLYKTAERIVSDASAITLPVQMLVSGEDYVVHRQPQI DFYQRLRNPQKELHVLPGFYHDTLGEKERHLGFDKMREFIGTLYSKPAQRFDYSNEDRWS QGADTWRMLSGGPEPYSMDDIVYRGLRYGMKILGTQSAGVRLGFDTGFDSGSTLDYVYRN QPQGSSALGRLIDKNYLNSVGWKGIRQRKIHLQTLIQQAVVTLAEQGKTVRVVDVAAGHG RYVLDALEGETVVNEILLRDYSELNVSKGQEMIASRGMAGRARFEQGDAFNREELAALEP RPTLGIVSGLYELFPENTLVRNSLAGLAEAIEPGGILIYTGQPWHPQLKTIAWSLTSHKD GKAWVMRVRTQGEMDALVREAGFDKCAQLIDEWGIFTVSMAVRRAS >gi|316920349|gb|ADCU01000001.1| GENE 282 303448 - 304734 445 428 aa, chain + ## HITS:1 COG:ZynbD_1 KEGG:ns NR:ns ## COG: ZynbD_1 COG0671 # Protein_GI_number: 15801736 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 EDL933 # 10 337 3 342 342 362 58.0 1e-100 MTTRRSVYWQGMGWLILLAPFFFLTYGQVNQFTAGRDNIGSLVFGWEHYIPFVPLTIIPY WSLDLLYGLSLFVCTSLNEQRRLVCRLVLASLVACAGFLLFPLRFTFTRPEILGLAGWLF GQLEQFDLPYNQSPSLHIILCWLLWRHFQRHLAGKWQMLNSGWFLLIAVSVLTTWQHHFI DVITGLAVGMVIDWMIPEPGKWLWRSASAKHRVLATRYLCGSLACLAGTFLTAWLWWPTL SLLIVALAYGLLGVDALQKDDKGRLTPAVWWLLLPWRVGMTISMYLYTRHLPAYSPLTDG VFLGTYPRKPIAQQAVLDLTCEFSRSRVTQSVTYYCVPMLDLVNPDEATLRRAVDKLEQL RVTHGSVLIHCALGLSRSALVVTAWLVQRYPALTLEQAVEHVRKARPQVVFTAEHMELLK RWTTKITV >gi|316920349|gb|ADCU01000001.1| GENE 283 304938 - 305129 127 63 aa, chain + ## HITS:1 COG:no KEGG:Pecwa_2362 NR:ns ## KEGG: Pecwa_2362 # Name: not_defined # Def: hypothetical protein # Organism: P.wasabiae # Pathway: not_defined # 1 58 77 134 136 65 63.0 4e-10 MSEENNKIAGEVLFVIWHREKLQELTFIERQQGAMNQCRYTMWITGGLWVIWLMGLLWQY ATF >gi|316920349|gb|ADCU01000001.1| GENE 284 305283 - 305735 203 150 aa, chain - ## HITS:1 COG:ECs4445 KEGG:ns NR:ns ## COG: ECs4445 COG4682 # Protein_GI_number: 15833699 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 129 1 129 146 174 65.0 5e-44 MKLNSQNNTSPAFAAMSWLALVGGVVVYIIGLWRSDMQLNEKGYYFAVILLALFSSVSLQ KTVRDRIENIPTSHIYYISCIASFVIAVILLAVGLWNATLLPSEKGFYAIAFFLSLFGAI SVQKNVRDSQTTMEDHILTKKTDVYETEEN >gi|316920349|gb|ADCU01000001.1| GENE 285 305994 - 306203 113 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLMKLLGDNNAKNINGERRSSERDLLLLCWIYHTDSVVRDKEVFGKTKLTIISQAFQHQR AISGKKLWY >gi|316920349|gb|ADCU01000001.1| GENE 286 306455 - 306616 58 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRGCSILSYIAFCIRIVIFTVNFIFIIFTVLNRIINGLFFKFATLVVGKIAI >gi|316920349|gb|ADCU01000001.1| GENE 287 307409 - 308974 773 521 aa, chain - ## HITS:1 COG:BH0992 KEGG:ns NR:ns ## COG: BH0992 COG3829 # Protein_GI_number: 15613555 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains # Organism: Bacillus halodurans # 104 510 35 452 454 278 38.0 2e-74 MNAIHLTMVVIMLTVGWNIKTIDRTAMIADVITEFSNMDIYIDALHVSSCEIFIRFNIPS ERNLQYLLGNLLINHDILSVYSANGDHSELSFSDYGHIVISNYGIINEFNHIAEKTFNLS RNEIIGRNISSIVNWNEIKDFRCGKIYAKEIKSKTNGDLFSCTIRPILQENKITGATIFI NNSVIKNTENKKVLQKYKNEKTPSDFDEFIYASPSMVACLAAAKKIAQSKYTVLIRGETG TGKELIARAIHHASERQECPFEAINCAAIPETLVESELFGYEYGAFSGALKGGKMGLFES ANHGTIFLDEFGELSLSLQSKLLRVLQDGMIKRVGGLKTQYVDVRVIVATNQNLEHLIEQ KLFREDLYYRVNILPITIPPLRERKEDILPLVSYFFQKYAAELNKKLILLPSALEVLMGY SWPGNVRELKNILLRTMLLAEKPEISGADISLPEDKNTENSIQNGSIKTMIETQEREIIR KYLVSLGSARKVANQIGLSHTTVLNKIKQYHLEHLLLSKRK >gi|316920349|gb|ADCU01000001.1| GENE 288 309078 - 310361 460 427 aa, chain - ## HITS:1 COG:YPO0277 KEGG:ns NR:ns ## COG: YPO0277 COG0814 # Protein_GI_number: 16120616 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Yersinia pestis # 5 427 6 428 428 510 64.0 1e-144 MSTIASISETKRQYNNIPLTAYDAGWILLCIGMAIGAGTVLVPVQIGLKGIWVFIVSFLI AYPATYMLQNLYMKTLSESDICEDYSNIITQYLGKNWGIALGIIYFVMLVHGMFIYSISV IYDSASYLKTFGVTEHLLSDSAVYKLVVFMVLVFIASRGERLLFKISGPMVVVKVGIIVL LGLVMIPHWDLKNITAFPDIGVFSRDVLLTIPFAFFSAVFVQILNPMNIAYRKREEDKHL ATYKAIRVHRISYIILISIIIFFSFSFTFSMSHEQAVEAFNLNISALAMAAKVIPGTLVH IMTTLLNIFAVLTAFFGIYLGFQEAVKGILLNIIQRFIPESRINHTALGIGVYVFIVLLL FLWVSLGFSVVIFFHIGSPLYGIVSCLIPCYLVYRVQKLHQFKGVQTWCVFLFGLLLVIS PFLKVFE >gi|316920349|gb|ADCU01000001.1| GENE 289 310522 - 311715 713 397 aa, chain - ## HITS:1 COG:FN1419 KEGG:ns NR:ns ## COG: FN1419 COG0626 # Protein_GI_number: 19704751 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Fusobacterium nucleatum # 1 394 1 394 395 506 60.0 1e-143 MKLDDKGYNTKIIHAGQHPDATTGALATPIFQTSTFVFENAKQGAARFALEEPGYIYTRL GNPTQTALEEKIAILEGGDAALATASGMAAISSTLLTLCGQGDHIIASEAIYGCTHALLS HSMPKFGIDVTFVDATNIENIKHAIRPNTKVIYIETPANPTLSIIDIDACAQLAHTNDAL LVVDNTFMSPYCQNPLKFGADIVVHSVTKYINGHGDVIGGVIVGSQEFINQARFVGVKDI TGGCISPFNAWLTLRGLKTLAVRMERHCQNAMQVAKFLSSHPAVTKVYYPGLPEHPNYEL GKKQMSNFGAVISFEIKGGVEAGQTVMDSVELCLLAVSLGDTETLIQHPASMTHSPMLPE ERMKAGITDGLIRISVGLEDPEDIIADLKQAFNKAAF >gi|316920349|gb|ADCU01000001.1| GENE 290 312330 - 314576 1586 748 aa, chain + ## HITS:1 COG:STM0585 KEGG:ns NR:ns ## COG: STM0585 COG4771 # Protein_GI_number: 16763962 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Salmonella typhimurium LT2 # 19 748 14 751 751 983 68.0 0 MGKGMEKFQWTRLCVATLVGISGAASAVDDASIEKDTEADTILVTAKQQTLQALGVSVIN AEAIKERPPARDISELIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILVDGLPVS SRNSVRLGWRGERDTRGDTGWVPPEMIERIEVIRGPAAARYGNGAAGGVVNIITKRQMET LHGTLNGYMNFPQHKEEGATKRTDFSLAGPLTDNFSFRLFGGYSKTQADGKYLNQGHQSE RTGSYSDTIPAGREGDIDKDINAMLHWDVMDGQSLEFETGYSRQGNLYAGDTQNTNTSKL VKDMYGKETNRMYRQTYALTHRGLWDNGVSAINYVQYERTRNSRMNEGLAGGTEGIFDSS NRGFSTTQLDSLLLHSDVSIPFNLGVSQTATVGAEWNEQKMKDPSSFTQTTAGGSVPGIA DANRSPYTSAQITSLFAEDNIELTDSTMLTPGLRFDYHSIVGNNWSPSLNLSQELGDYFT MKMGIARAYKAPSLYQTNPNYLLYSRGQGCYASAGACYLQGNNDLKAENSINKEIGIEFH NGDYLAGVTYFRNDYRNKIEAGYSPIGKSSTGAADIYRWENVPKAVVEGLEGSLNIPVSQ NVTWNNNMTYMFKSENKKTDDYLSIIPEYTLNSSLRWQAREDWSMETTMTWYGRQKPKKY NYKGEKVTGSENNEVSPYAVFGLSSTYTVNKNLSLTGGIENIFDKRQFRAGNAQTTGNAV THSYMYGAGAQTYNEPGRTFYVSVNTYF >gi|316920349|gb|ADCU01000001.1| GENE 291 314622 - 315548 519 308 aa, chain - ## HITS:1 COG:BS_yuiI KEGG:ns NR:ns ## COG: BS_yuiI COG2819 # Protein_GI_number: 16080254 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Bacillus subtilis # 25 303 39 301 314 128 30.0 1e-29 MLRYLLGIIVALLPFISAANPDTASSPYQIPDTQIFTFHSPQNGDYKIMVYVPKTKPPAQ GWPVMYILDGDTYFAQAASLLAQQSCARCALEPGVIVAIGYDGKSRRDRDYRPHVQKIAQ EHNPQGGTYPTGAAGQSDLFFAFIEDELKPDIAQRFPIDKQRQGLFGHSYGGLFTIDMAT KHPQSFTNWFASSPSVWWNQRYLQQQAEQFLVNKRSMVSPSGIIRLSVGGDEQTLQPFEQ KLPEEKQAILKQHRAQRAMVDGVKTLNDTLKKIDGYSEKVSFQCYPHQSHISVSSMALSD ALKIHFAR >gi|316920349|gb|ADCU01000001.1| GENE 292 315973 - 316170 178 65 aa, chain + ## HITS:1 COG:no KEGG:Spro_2057 NR:ns ## KEGG: Spro_2057 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 64 1 69 69 69 59.0 4e-11 MLENYFPDNASSEQKQRVIAVNAALELIKVTLADSNDGNSVSHQLQAAERHIESLADAIQ KAVKI >gi|316920349|gb|ADCU01000001.1| GENE 293 316269 - 316475 241 68 aa, chain - ## HITS:1 COG:no KEGG:YE1594 NR:ns ## KEGG: YE1594 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 3 68 16 81 81 74 63.0 1e-12 MTQQNDFGLTETQKEEIDEIALQRVRAMNSDEFLCQSIDKKIHAMEENIKAYFKARLSFH MKNGTDNK >gi|316920349|gb|ADCU01000001.1| GENE 294 316526 - 317101 479 191 aa, chain - ## HITS:1 COG:STM0580 KEGG:ns NR:ns ## COG: STM0580 COG1309 # Protein_GI_number: 16763957 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 190 1 191 193 190 50.0 1e-48 MARPLSEEKKQALLTAATHAIAQLGISASTAIIAKKAEVAEGTLFRYFPTKDALFNALYL HLKKSLCSAIMNELVVDSDPKQQMQNIWNSYINWGARNSDANRTIRLLIVSDKISQEVQD EVNIMFPELYEISRKSMCHKFQNAGFSSFGDALFFSLAETTIEFSIKEPSKAKTFKEVGF QAIWHALNADV >gi|316920349|gb|ADCU01000001.1| GENE 295 317451 - 318377 562 308 aa, chain + ## HITS:1 COG:XF1739 KEGG:ns NR:ns ## COG: XF1739 COG2220 # Protein_GI_number: 15838340 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Xylella fastidiosa 9a5c # 1 307 63 368 385 290 44.0 2e-78 MVSGSKGRMAVMWDFLFKKSRLAKPDHALPYVNTDLVSIDTDKDVIVWLGHSSWYLQLDG KRILIDPVLSDHAAPFSFMNKSFIDDYPWQAQRMPKLDYVLISHDHYDHLDYETMQILQS RIGQIITPLGVGTHLLRWGFVPEQIVEADWNQQVVLDETLTLHVLPARHFSGRGFEGNPT LWASFLLQSSQRRLYYSGDSGYGTHFKKIGDRFGPIDVAILENGQYDSDWQYIHMLPEET AQAALDLNAAAVLPSHAGRFVMAKHSWNEPFIRLALTSRDKPYRLLTPKLGEVVWDDGKT QQFDVWWN >gi|316920349|gb|ADCU01000001.1| GENE 296 318398 - 318745 239 115 aa, chain + ## HITS:1 COG:STM0581 KEGG:ns NR:ns ## COG: STM0581 COG2207 # Protein_GI_number: 16763958 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 106 1 106 113 146 63.0 9e-36 MTIPEQVIQSLIVWIDENIHRQLHIDDIAKHAGYSKWHLQRIFVHYRGETLARYVRSRRL EIVAEELLCSDERVLDICLKYGFESQQTFTRIFTRHFKQPPSLWRKTHQHDELVG >gi|316920349|gb|ADCU01000001.1| GENE 297 319236 - 320561 1165 441 aa, chain + ## HITS:1 COG:yeeO KEGG:ns NR:ns ## COG: yeeO COG0534 # Protein_GI_number: 16129928 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 1 426 108 533 547 622 78.0 1e-178 MLLMGVLSTFLVSWIGKEAMAGVGLADSFNMVIISFFAAVDLGTTVVVAFSLGTRDRRKA RAAARQSLVLMTVVALLLAAGIHLAGEQIIDVIAGDATSEVKGLALSYLQTTVWSYPAAA IALIGSGALRGAGNTKIPLLVNGGMNILNIMISSVLIYGALGWHGLGFIGAGLGLTISRY IGAACIIYVLLKGFNPALRISIKSYFKPLKLNILWEVLGIGIPASIESVLFTGGKLLTQM FVAGMGTNVIAGNFIAFSVAALINLPGNALGSASTIIVGRRLGKGQIGQAERQLRYVFWL STVVLTLIAWGTAPFAGLFASFYTREPDVIEVVKILLWLNAAFMPIWAASWVLPAGLKGA RDVRFAMWISMLGMWGCRVVAGYILGIVLGMGVVGVWLGMFFDWAVRGVCFYWRMVSGRW LWKYPRAVRPELTEVDVRSES >gi|316920349|gb|ADCU01000001.1| GENE 298 320624 - 321769 1197 381 aa, chain - ## HITS:1 COG:ECs4483 KEGG:ns NR:ns ## COG: ECs4483 COG1304 # Protein_GI_number: 15833737 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Escherichia coli O157:H7 # 1 381 1 380 396 695 90.0 0 MIISAATDYRAAAQRKLPPFLFHYIDGGAYAEHTLRRNVEDLAQVALRQRVLKNMSALSL ETQLFNEKLAMPVALGPVGLCGMYARRGEVQAARAAEQKGIPFTLSTVSVCPIEEVTPAI KRPMWFQLYVLKDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMR RYLQAMTHPAWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLASNFDPSISWSDLEWI RDFWDGPMIIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGD IKILADSGIRSGLDVVRMIALGADSVLLGRAYLYALATAGQAGVENLLGLIEKEMRVAMT LTGAKSIAEISRDSLVQEGLG >gi|316920349|gb|ADCU01000001.1| GENE 299 321766 - 322557 533 263 aa, chain - ## HITS:1 COG:lldR KEGG:ns NR:ns ## COG: lldR COG2186 # Protein_GI_number: 16131475 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 8 262 7 257 258 324 67.0 9e-89 MTPLHQPRLADHLVERVKAIIHERKLEAGMRLPAERQLAAELGVSRSSLREAIQKLISEH VLISRRGGGTYVRFELQPWSEQRIVEPLRTLVAEDPNYRYDILEARHAIEASTAWHAAMR ATEADKEKLQYCFDATLMLKESDNPDLAAQADVRFHLAIAEASHNVVLLQTMRGFFDLMQ SSVMHSRQRMYTAPTIFARLTEQHRELLQAILAGDPDRASKAAKAHLGFVHSTIKNLHED EARQARITRLPDEETNAIREGNP >gi|316920349|gb|ADCU01000001.1| GENE 300 322554 - 324209 1271 551 aa, chain - ## HITS:1 COG:STM3692 KEGG:ns NR:ns ## COG: STM3692 COG1620 # Protein_GI_number: 16766977 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Salmonella typhimurium LT2 # 1 551 1 551 551 858 87.0 0 MQVWQQVYDPIGNIWLSSLIAALPILFFFYALIKLKLKGYIAATITVGIALLVALFFYKM PADRAFASVIYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDIIRSSILSITPDQRLQMLI VGFCFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLCLIVNTAPVAFGAMGIPIIVA GQVTGLDSFEIGQMVGRQLPFLTIIVLFWIMAIMDGWRGIKETWPAVVVAGGSFAVAQYL SSNFIGPELPDIISSLVSLVCLTLFLRVWQPKRIFRFNDVGASITDQTLARQNYTLKQVI RAWMPFIFLTATVTIWSIPPFKALFAKGGALQDWGFNFSVPFLDKLVAKMPPVVAESMPY AAVYKLDWLSATGTAIIVAAVISVIYLRMKPRAAVETFFSTMKELALPIYSIGMVLAFAF ISNYSGLSATLALALAHTGDAFTFFSPFLGWLGVFLTGSDTSSNALFAALQATTAQQIGV SDVLLVAANTTGGVTGKMISPQSIAIACAAVGLVGKESDLFRFTVKHSLIFTCMVGVITT LQAYLLTWMIP >gi|316920349|gb|ADCU01000001.1| GENE 301 324568 - 325461 488 297 aa, chain - ## HITS:1 COG:YPO2807 KEGG:ns NR:ns ## COG: YPO2807 COG0583 # Protein_GI_number: 16123005 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 295 1 295 297 414 69.0 1e-115 MLKENFNDLISFLVVARERSFTKAAAKLGVSQSALSHSIRGLEERLDIRLLTRTTRSVAP TEAGEKLATSLEPRFAEIESELDALRDMRDTPAGNIRITAGEHAVDSVLWPVLKPFLASY PDINVEIVVDNTLTDIVSGRFDAGIRLGEQVAKDMIAVRIGPDMSMAVVGSPSYFEQYGT PETPQDLQNHRCINMRLPTMGGLYAWEFEKEGQELRVRVDGQLIFNSLRQRIDAANLGFG IAYVPEDSVKNELADGRLVQVLKEWCNTFPGYYLYYPSRKQHTTAFSLFVEALRYKR >gi|316920349|gb|ADCU01000001.1| GENE 302 325646 - 326041 434 131 aa, chain + ## HITS:1 COG:SMc01911 KEGG:ns NR:ns ## COG: SMc01911 COG1917 # Protein_GI_number: 15965016 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Sinorhizobium meliloti # 1 130 1 130 132 172 66.0 1e-43 MKIIRNASQASVSGSADYFTGNVRIDGMFQAEEPARVGGATVTFEPGARTAWHTHPLGQT LIVTQGRGWVQELGKDVQEINPGDIVWIPEGVKHWHGATAETAMTHIAIAESLNGSVVDW MEHVTDEQYRK >gi|316920349|gb|ADCU01000001.1| GENE 303 326247 - 326660 245 137 aa, chain + ## HITS:1 COG:STM1097 KEGG:ns NR:ns ## COG: STM1097 COG2351 # Protein_GI_number: 16764455 # Func_class: R General function prediction only # Function: Transthyretin-like protein # Organism: Salmonella typhimurium LT2 # 26 137 26 136 136 149 65.0 1e-36 MKSLKVLLLASLISLTATAGAEQIKNPLSVHILNQQTGLPSAGVTVTLEHKEGDKWVNLS SAVTDEDGRIPALYPAHKTMALGDYKVTFKTGAYFSALKQDTFFPEIPVVFHVTKMNQHL HVPLLLSQYGYSTYRGS >gi|316920349|gb|ADCU01000001.1| GENE 304 326731 - 327345 203 204 aa, chain - ## HITS:1 COG:YPO3131 KEGG:ns NR:ns ## COG: YPO3131 COG1309 # Protein_GI_number: 16123293 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 201 1 202 218 190 48.0 2e-48 MARKTKEDAFITRQRIINVAIREFSTQGFSSTSLADIASAAGVTRGAIYWHFKNKEELFN EIWQQSAHYSLYISEKIHSKNKDNPLKALQETLTYILRAAVSDPQQKSLMKIMFHQCEFT KEMTSRSEIRRMVYFEEERLSNNLKRCVTLNQLPSKLNIEQSVIIIRAYMSGLIENWLLC SENYDLNSNASGLVDNLITLLKIQ >gi|316920349|gb|ADCU01000001.1| GENE 305 327938 - 329101 1216 387 aa, chain + ## HITS:1 COG:ECs4137 KEGG:ns NR:ns ## COG: ECs4137 COG0845 # Protein_GI_number: 15833391 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 373 1 373 385 462 70.0 1e-130 MKKYSEFILLPSVILFSACFTLSGCDSEDVKAPLPQPQVGVVTLKAEALQVTTELPGRTD AYRVAEVRPQVGGIILKRNFTEGSDIRGGESLYQIDPAPYKAAYDSAQGELAKAVAAAKL AHLTVQRDKPLLSDHYVSQQEFDTAIANAQQADADVQAAKANVETARINLAYTKVSSPID GRIGQSNVTEGALVTTEQATALATVQQLDPIYVDVTQSSNDFMRLKQAVTQGSLEKSAQQ AEVTLVMENGQAYPLKGKLQFSDVSVDESTGSITIRALFPNPQHDLLPGMFVRARVDEGM QKDALLVPQQGVTRNPRGEATVMLVNAKSQVEVRNVTASQAIGDKWLVTEGLHSGDRVIV SGLQKVRPEMTVKVEEQNLQANAPQGQ >gi|316920349|gb|ADCU01000001.1| GENE 306 329140 - 332262 2720 1040 aa, chain + ## HITS:1 COG:STM3391 KEGG:ns NR:ns ## COG: STM3391 COG0841 # Protein_GI_number: 16766686 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Salmonella typhimurium LT2 # 1 1034 1 1034 1037 1719 85.0 0 MAKFFIERPIFAWVLAIILMLAGGLAILRLPVAQYPTIAPPAIAITATYPGADAQTVQDT VTQIVEQNMNGIDNLMYMSSTSDSAGGVTITLTFNSGTDPDIAQVQVQNKLQLAMPLLPQ EVQQQGISVEKSSSSFLLVAGFISDNKNLTQDDISDYVASNIKDPISRSNGVGDVQLFGA QYAMRIWLNSDQLNKYQLTPIDVINQLKIQNDQIAAGQLGGTPSVHNQQLNASIIAQTRL KDPEQFGQVLLKVNQDGSQVRLKDVARIELGGENYNIVAKINGQPAAGLGIKLATGANAL DTAAAIKAKLAELQPYFPQGMRVVYPYDTTPFVQISIHEVIKTLLEAIILVFLVMYLFLQ NIRATLIPTIAVPVVLLGTFAVLSAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM AEEHLSPKEATKKSMEQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL SVLVALILTPALCATMLKPVSAEGHGEKKGFFGWFNRTFEKSAHHYTDSVGGILRSTGRY LIIYVLIVIGMGVLFLRLPTSFLPEEDQGVFMTMVQLPAGATQLRTQQVLDQVTQYYLTK EHANVESVFTVNGFSFSGQGQNSGLAFISLKPWDQRSGKENGVTAIVGRAMKDFTKIKDG LVFPFNLPAIIELGTATGFDFELIDQANLGHEKLTQARNQLLGMVAEHPEVMVRVRPNGL EDTPQYKLEVDQEKAQALGVSLSDINQTISIALGGSYVNDFIDHGRVKKVYAQADARFRM LPSDINNWYVRGDSGKMVPFSAFSTAGWISGSPRLERYNGLPSMEILGEPTLGKSTGDAM QMMEQLVAKLPAGIGYDWTGMSYQERLSGNQAPALYAISLVVVFLCLAALYESWSIPFSV MLVVPLGVVGALLAAAIRGMNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLI DATLDAVRMRLRPILMTSLAFILGVLPLVISSGAGSGAQNAVGTGVMGGMLTATLLAIFF VPVFFVVVRRRFSKDGAPSK >gi|316920349|gb|ADCU01000001.1| GENE 307 332501 - 333115 439 204 aa, chain - ## HITS:1 COG:YPO2438 KEGG:ns NR:ns ## COG: YPO2438 COG0741 # Protein_GI_number: 16122659 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Yersinia pestis # 39 204 53 218 220 197 59.0 1e-50 MFTMISLPKHPARLAVIACILFLAGCSHKHSYKKYDAHAYDDVIEDAADDYKVDPKLIAA IIQVESSFNPEAVSPSNAIGLMQLKASTGGCDAYRYKGKSGCPDDDDLLDPETNIDLGAA YIGAIQYQQLNWIDDPVTRRYATEVAYANGAGALLRTFSSNRKTAIKMINQLSPEAFHWH VRQYHPAAQAPKYMAKVEQVYNTL >gi|316920349|gb|ADCU01000001.1| GENE 308 333288 - 333602 249 104 aa, chain - ## HITS:1 COG:YPO0326 KEGG:ns NR:ns ## COG: YPO0326 COG3254 # Protein_GI_number: 16120663 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 103 1 103 104 169 80.0 8e-43 MIRKAFVMQVNPDAHTEYQRRHSPIWPELEAELKAHGAHRYSIFLDEKRNLLFGVVEVES EARWNSIAETDVCQRWWKHMGDVMPSNPDCSPVSDDLREVFYLA >gi|316920349|gb|ADCU01000001.1| GENE 309 333612 - 334760 1248 382 aa, chain - ## HITS:1 COG:YPO0327 KEGG:ns NR:ns ## COG: YPO0327 COG1454 # Protein_GI_number: 16120664 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Yersinia pestis # 1 382 1 382 382 637 84.0 0 MSFMLALPKISLHGNGAINDMVKLLSDKKWGKALIVTDGQLVEMGLLDGLFDAMQQHHLS YALFKDVYPNPTEELVQAGFKAYQQNQCDYLIAFGGGSPIDTTKAIKILTANPSPSTAYS GVGKVKNPGVPLVAINTTAGTAAELTSNAVIIDSQRQVKEVIIDSNIIPDIAVDDPAVML NIPASVTAATGMDALTHAIEAYVSVGAHPLTDHSALESIRMITEWLPQAVDNGQNLQARE MMAYGQYLAGMAFNSAGLGLVHALAHQPGATHNLPHGVCNAILLPVIEEFNRPNAVARFA RIAQAMGVNTDAMNEEQASQSAIQAIRQLSARVGIPSGFNTLGIKEADIEGWLDKALADP CAPCNPRSADREQVRALYLQAL >gi|316920349|gb|ADCU01000001.1| GENE 310 334837 - 335661 706 274 aa, chain - ## HITS:1 COG:YPO0328 KEGG:ns NR:ns ## COG: YPO0328 COG0235 # Protein_GI_number: 16120665 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Yersinia pestis # 1 272 1 272 274 494 87.0 1e-140 MQSIIDSWFVQGMIKATSDMWLKGWDERNGGNVSLRLLEEEVAPFRADFNAQPRCVELTQ PATELANSWFLVTGSGKFFRNVQIAPEENLVLLQVSADGMAYNIHWGLTKGGLPTSELAA HFQSHIVRMQVTGGDNRVIMHCHATNLIALSYVHDLDNAKFTRLLWEGSTECLVVFPDGI GIVPWMVPGTDGIGAQTAEQMREHGLVLWPFHGIFGSGPTLDDAFGLIDTAEKSAEIMVK VLSMGGKRQTISTQELIALAARFGVTPMAAALKD >gi|316920349|gb|ADCU01000001.1| GENE 311 335686 - 336942 1171 418 aa, chain - ## HITS:1 COG:YPO0329 KEGG:ns NR:ns ## COG: YPO0329 COG4806 # Protein_GI_number: 16120666 # Func_class: G Carbohydrate transport and metabolism # Function: L-rhamnose isomerase # Organism: Yersinia pestis # 1 418 1 418 418 789 89.0 0 MTTLIDQAWELAKQRFSAVGVDVENALKTMEQLPVSMHCWQGDDVAGFENPEGSLTGGIQ ATGNYPGKARNAAELRSDLEMALSLIPGPKRLNLHAIYLESDTPVARNKIEPRHFAHWVE WAKKHHLGLDFNPSCFSHPLSADGFTLSSADPETRQFWIEHCQASRRISAYFGEQLGTPS VMNIWIPDGMKDTPIDRLAPRQRLASALDEVISEKLNPAHHIDAVESKLFGIGAESYTVG SNEFYLGYAASRQTALCLDAGHFHPTEVISDKISSAMLYVPRLLLHVSRPVRWDSDHVVL LDDETQAIANEIVRHDLFDRVHIGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTEHL RKLEESGDYTARLALLEEQKSLPWQAVWEMYCQRNDVPADASWLNAVREYEEQVLSQR >gi|316920349|gb|ADCU01000001.1| GENE 312 336939 - 338414 1180 491 aa, chain - ## HITS:1 COG:YPO0330 KEGG:ns NR:ns ## COG: YPO0330 COG1070 # Protein_GI_number: 16120667 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Yersinia pestis # 6 473 1 468 485 696 71.0 0 MTTRHIVAIDLGASSGRVMLASYHLGTQKLTLKEIRRFANQLVSRDGFDTWDLDSIEREI LAGLTQIDAEKILLDSIGIDTWGVDYVLLDANGERVGHPIAYRDSRTHGVMTQAQKTLGH EFIYQRTGIQFLPFNTIYQLRALSEQQPEVLDRVEHLLLIPDYLHYRLTGKMNWEYTNAS TTQLLNINTGDWDTDLLNYAGIPARWFQKPTQPGNRVGYWHSPKGQNVPVVAVATHDTAS AVMATPMQDPDAAYLSSGTWSLMGIESVTPFTDNAALQANITNEGGTEGHYRVLKNIMGL WLLQRATQELHVQYLPDLIAEAALQPAQYFLINPNDERFINPDNMCLEIQNDCRERGAPV PETPAELARCIFDSLANLYQQVAKELEELRGKPLRHLHIVGGGSQNRFLNQLCADLCNLD VTAGPVEASTLGNIGCQLIALGDVANVADFRRIVAHNFPLEHFIPNHPHSLSAPQTHSGA QTSAQFKGTCV >gi|316920349|gb|ADCU01000001.1| GENE 313 338750 - 339571 490 273 aa, chain + ## HITS:1 COG:YPO0332 KEGG:ns NR:ns ## COG: YPO0332 COG2207 # Protein_GI_number: 16120669 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 1 272 1 272 273 464 81.0 1e-130 MTVLHSIDFFSSGYAPVAIEPRAPQPEFPEHHHDFYEIVIVEQGAGVHVFNGNPYTLNSG CVCFVRDHDRHLFEHTDGLFLTNVLFRSPDAFKFLSGVEQFLPSERNGVYPSHWRISQQV LQQVKVLMSKLEQAPDSERAEDIALHESVFMQLIVQLWQGCSAQIGDDQEGRLRQLLDWL QDHYAESVEWSELADRFSLPLRTLHRQLKNHTGMTPQRYLTRLRLLQARHQLCHSDNSIT DIAYQCGFGDSNHFSTLFKREFDQSPRALRCQS >gi|316920349|gb|ADCU01000001.1| GENE 314 339706 - 340566 639 286 aa, chain + ## HITS:1 COG:YPO0333 KEGG:ns NR:ns ## COG: YPO0333 COG2207 # Protein_GI_number: 16120670 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 5 282 5 282 290 432 75.0 1e-121 MGKLLLLESRDYLPSEQMPVAVADRYPQQVFAEHTHQFCEIVIVWRGNGLHILNDRPYRI TCGDIFYINADDCHSYESVNELVLDNIIYCPERLRLNAQWNLLLPPFDETTRQNHWRLST GGLAQARPIIAQLTQESRKNDALSMQLTEALLLQLAIVLKRYRYTAESAHLLPAGEQLDL LMASLQGGLDNHFDLAAFCAEHQLVERSLKQLFRQQTGMTISHYLRQLRLCQAKRLLRRS EYRISEIATRCGFEDSNYFSVVFTRDAGITPREYRQRFVTEPERVV >gi|316920349|gb|ADCU01000001.1| GENE 315 340639 - 341556 888 305 aa, chain + ## HITS:1 COG:BH3927 KEGG:ns NR:ns ## COG: BH3927 COG4989 # Protein_GI_number: 15616489 # Func_class: R General function prediction only # Function: Predicted oxidoreductase # Organism: Bacillus halodurans # 1 305 1 305 305 467 71.0 1e-131 MKQIKLGGSTLQVPAIVVGCMRMDELKAVEAETFVQTALDLGANFFDHADIYGGGECERI FARAAKLNDDRREKVFLQSKCGIRKGLFDFSKAHILKSVDGILERLDTDYLDMLLVHRPD ALMEPEEVAEAFDHLLDTGKVRRFGVSNQSPMQMALLQKFMSQKILANQLQLSITNSGMI RSGINVNMENASSIDHDGEVLNYCRLNDVTIQAWSPFQYGMFEGVFLGNAKFPELNQKID EIAARYGVSNTTITTAWILRHPANMQMISGTMSTSRLKQICQACDITLTREEWYEIYRAA GNELP >gi|316920349|gb|ADCU01000001.1| GENE 316 341676 - 342128 222 150 aa, chain + ## HITS:1 COG:L69304 KEGG:ns NR:ns ## COG: L69304 COG0454 # Protein_GI_number: 15673990 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 1 150 1 151 152 72 29.0 3e-13 MIRILPLFEVPEHSELITDWLFQAFGSENSRDFFASIVNSSLRPEGLPVTFVALLDDKPV GTVGLWRCDLISRQDLYPWLAALYIDESQRGCGLGAQLQHHVEAFSRRTGFRELYLYATF ANYYERFGWQHIGDGLDYPDQPVRLYRKDI >gi|316920349|gb|ADCU01000001.1| GENE 317 342135 - 343559 1069 474 aa, chain - ## HITS:1 COG:SMb21420 KEGG:ns NR:ns ## COG: SMb21420 COG2160 # Protein_GI_number: 16264996 # Func_class: G Carbohydrate transport and metabolism # Function: L-arabinose isomerase # Organism: Sinorhizobium meliloti # 5 473 6 474 475 453 47.0 1e-127 MTHPLNILLFGIGLDTYWPQFHGLKSRLESYLGEIEQRLAQQHDIHNGGLIDSVTATDQL LEQMRHRPLDVVVLYISTYALSSTVLPLVQALGKPVLILALQPDTGLPYQRIREMDDRGD RTGEWLAHCQACSAPELANVFNRANIGFQLLVGALHNDDEVWSELDEWLNAYQIRMALSK TQIGLLGHYYDGMYDVYSNLTNLSARLGVRFKPLEMCELNQLRQNTTPALLDSKRTEMSQ AFTIDPLCSESELMRAAHTACALDALVKQHHLGALAYYYEGQHGNDYENIVTSVIAGNTL LTQKEIPVAGEYEVKNVIAMKIFSLLGAGGSFSEPYGIELQDDVVLWGHDGPAHPLMAEG DVRLVPLPVYHGKPGCGVSIQMTVKNGPITFLSVVETRGGEIVLQYAEGESVEGETLDIG NTNSRYRFSMGARNFTRAWSTAGPAHHCAIGLGHWGSQLEKLANVLGVRTQRII >gi|316920349|gb|ADCU01000001.1| GENE 318 343570 - 344604 981 344 aa, chain - ## HITS:1 COG:YPO0334 KEGG:ns NR:ns ## COG: YPO0334 COG0697 # Protein_GI_number: 16120671 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Yersinia pestis # 1 344 1 344 344 553 89.0 1e-157 MNDSVVLGIIWHLVGAASAACFYAPFKQVKNWSWETMWSIGGFVSWLILPWLVSYILLPD FWAYYGSFSFAVLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIIGTLMTPI LQGRIDVLFGTPGGRMTLLGVFVALIGVATVSYAGLLKERAMGIRAEEFNLKKGLVLAVM CGIFSAGMSFAMDAAKPMHEAAAALGINALYVALPSYVIIMGGGALINLGYCFIRLATLK NISIKADFSWPRKLIVTNVLFSMLAGLMWYLQFFFYAWGHAKIPAKYDYMSWMLHMSFYV LCGGIVGLLLKEWKCSSKKPVSVLCIGCLIIILAANIVGLGMAS >gi|316920349|gb|ADCU01000001.1| GENE 319 345015 - 345338 334 107 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_2950 NR:ns ## KEGG: NT01EI_2950 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 4 101 1 98 106 124 74.0 1e-27 MSDLEVQLRNSLAALDDLKESFEQQRLVWQQECEGIRMQLEQARQREAALLQKNEQLTRK LVELGSLPENNPLLKQFKMVGAHIEALAQEATAFNNYISSVTITTQR >gi|316920349|gb|ADCU01000001.1| GENE 320 345396 - 345818 283 140 aa, chain - ## HITS:1 COG:VCA1053 KEGG:ns NR:ns ## COG: VCA1053 COG0607 # Protein_GI_number: 15601804 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Vibrio cholerae # 1 131 36 166 166 163 56.0 7e-41 MTSLVSHVPPADSSDAERHFSRRFQFETDCSDVHYSLQQQNIDFVLLDVRSPELYQRSHL PQAINMPHKEIDQRLYQRYARHTLFVVYCAGPHCNGAQKAALALSRLGYPVKEMIGGMTG WQDEGFTFFGEPQKNVTCGC >gi|316920349|gb|ADCU01000001.1| GENE 321 345928 - 346905 438 325 aa, chain + ## HITS:1 COG:mll3844 KEGG:ns NR:ns ## COG: mll3844 COG4977 # Protein_GI_number: 13473293 # Func_class: K Transcription # Function: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain # Organism: Mesorhizobium loti # 2 319 8 328 332 325 50.0 8e-89 MDRNPGLVATLAYDGLCSFEFGIALEIFALPRPEFDFPWYQHCVVGVDDGPMRTTNGVTM LAEHGLEYLAQANTIVIPGWRGNDVPPPPALLEAVRAAYKRGVRFITICSGVFVLAAAGI LSGKRVTTHWRYCQQLAERYPDVQVDADVLYVDSGQIMTSAGSAAGIDACLYLVSKDFGV QIANRVARRLVMAPQRSGGQKQFIAHSLEVKTHDGLYLLLEKVQTSLHLSWSVKMMARES NMSERTLARRFATSLGMSPASWLQQARMSLACEQLELGNKHIESVAEMCGFSTSEGFRQA FRQHLGISPSVYRRRFSQNNPLSDV >gi|316920349|gb|ADCU01000001.1| GENE 322 347023 - 347220 312 65 aa, chain + ## HITS:1 COG:YPO3778 KEGG:ns NR:ns ## COG: YPO3778 COG1826 # Protein_GI_number: 16123912 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Yersinia pestis # 1 62 1 62 88 68 59.0 3e-12 MEGISITKLLVIAVLIVLLFGTNKLRTLGSDLGAALKGFKKAMNDDSAKSGADADSAAPR VDHKD >gi|316920349|gb|ADCU01000001.1| GENE 323 347402 - 348349 801 315 aa, chain - ## HITS:1 COG:ECs0666 KEGG:ns NR:ns ## COG: ECs0666 COG0320 # Protein_GI_number: 15829920 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Escherichia coli O157:H7 # 1 315 7 321 321 612 93.0 1e-175 MERGVKYRDADKMALIPVKTVAVEREQLLRKPEWMKIKLPADSSRIQGIKAAMRKNGLHS VCEEASCPNLAECFNHGTATFMILGAICTRRCPFCDVAHGRPVAPDANEPEKLAQTIADM GLRYVVITSVDRDDLRDGGAQHFADCIRAIRAKNPTIRIETLVPDFRGRMERALDILTET PPDVFNHNLENVPRIYRQVRPGADYNWSLKLLENFKAAHPEIPTKSGLMVGLGETNEEII EVMRDLRAHGVTMLTLGQYLQPSRHHLPVQRYVSPDEFEEMKAEAMAMGFTHAACGPFVR SSYHADLQAKGVEVK >gi|316920349|gb|ADCU01000001.1| GENE 324 348360 - 349028 558 222 aa, chain - ## HITS:1 COG:YPO2599 KEGG:ns NR:ns ## COG: YPO2599 COG0321 # Protein_GI_number: 16122812 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Yersinia pestis # 1 216 2 217 233 338 76.0 7e-93 MTRLQQDKIILRQLGLQPYVPVSQAMHTFTDQRTESTPDELWLVQHHPVFTQGQAGKAEH VLAAGDIPVIQSDRGGQVTYHGPGQQVMYVLVDLKRNKFGVRQLVTAIEQTVVNTLEKFS IEAHARADAPGVYVGEKKICSLGLRIRKGCSFHGLALNTAMDLGPFSRINPCGYAGMQMT QISALNPDVTLENVQSVLVEQFIQILGYQSAELSNWNPHDYE >gi|316920349|gb|ADCU01000001.1| GENE 325 349187 - 349465 362 92 aa, chain - ## HITS:1 COG:YPO2600 KEGG:ns NR:ns ## COG: YPO2600 COG2921 # Protein_GI_number: 16122813 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 6 92 1 87 87 139 81.0 2e-33 MLERNMKTKLNELLEFPCSFTYRVLGLAQPELVDQVVEVVQRHAPGDYQPQVKPSSKGTY HSVAITINATHIEQVETLYEELGKIEIVRTVL >gi|316920349|gb|ADCU01000001.1| GENE 326 349560 - 350771 1201 403 aa, chain - ## HITS:1 COG:YPO2601 KEGG:ns NR:ns ## COG: YPO2601 COG1686 # Protein_GI_number: 16122814 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Yersinia pestis # 1 403 1 400 400 705 84.0 0 MKYNFASRSIKRIALSSLLAIGMVNVVHADDVNLKTMIPGVPQIDAEAYILIDYNSGKVL AESNADARRNPASLTKMMTSYVIGQAMKAGKFTENDVVTVGQDAWATGNPVFKGSSLMFL KPGDRVPVSLLIRGINLQSGNDACVAMADYVAGSQDAFVGLMNNYVKALGLQNTHFQTVH GLDADGQYSSARDMALIGQALIRDVPNEYAIYKEKEFTFNNIRQMNRNGLLWDTSMNVDG IKTGHTESAGFNLVASATEGQMRLISAVLGGHTSKGRESESKKLLTWGFRFFETVSPLKA GREFASEPVWFGDTDRAQLGVDKDVYLTIPRGRMKDLKASYTLNSTELDAPLAKNQVVGT INFQLDGKTIEQRPLVVLNEVQEGGFFSRMIDHIKLMFHRWFG >gi|316920349|gb|ADCU01000001.1| GENE 327 350935 - 352032 917 365 aa, chain - ## HITS:1 COG:YPO2602 KEGG:ns NR:ns ## COG: YPO2602 COG0797 # Protein_GI_number: 16122815 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Yersinia pestis # 6 364 3 359 360 357 60.0 3e-98 MRMAHKSWLSAGLLSLFLAGCTNTTTTETPAPQQPAYNGPVEEISGAEPRYEPFNPATSQ DYSVNGTQYKVVQDPSNFSQVGYATSYGEENGGNMTAIGEQFDPNAMTAAHATLPLPSYV RVTNLANGRRLVVRLNDRGPYTAGKVIDLSRAAADRLNISNNTKVRIDFISVAPDGTMSG PGTIGTTIAKQSYALPARPTIGQETTQVSMSPSASDTQVAVRPVANPTPATMNNDDNMPV SAPASNSTGFLGAPQPLRTGVLEGTEPVTSPAPAAVAAPAAVAASTTASANGKFMVQVGA VSDGARAQQWQQKLSQQFGVPGKVSPNGAMYRVQLGPFSSRQEAAALQQRLASEAQQQSF IASAQ >gi|316920349|gb|ADCU01000001.1| GENE 328 352041 - 353153 894 370 aa, chain - ## HITS:1 COG:YPO2603 KEGG:ns NR:ns ## COG: YPO2603 COG0772 # Protein_GI_number: 16122816 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Yersinia pestis # 1 370 1 370 370 585 90.0 1e-167 MTENQQKRSIWAKMHIDLPFLLCILSILAYSAFVMWSASGQDVDMMERKIGQIFMGLCVM LVMAQIPPRVYESWAPYLYVFCVILLILVDAFGQISKGAQRWLDLGFVRFQPSEIAKIAV PLMVARFINRDVCPPSLKNTGIALILIFMPTLLVAAQPDLGTSILVAASGLFILFLAGLS WRLILVAVVLVAAFIPILWFFLMHDYQQARVMMLLDPESDPLGAGYHIIQSKIAIGSGGF GGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVGVLVLLGLYLLTIMRGLMIAAKAQT TFGRVMVGGLMLILFVYVFVNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIVMSIH THRKMLSKNL >gi|316920349|gb|ADCU01000001.1| GENE 329 353173 - 355068 1709 631 aa, chain - ## HITS:1 COG:YPO2604 KEGG:ns NR:ns ## COG: YPO2604 COG0768 # Protein_GI_number: 16122817 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Yersinia pestis # 1 631 1 631 631 1122 85.0 0 MKIDRNPFRDYSAESALFIRRALVAFLGILILSGILVFNLYHLQILRFEDYKTRSNENRI KLVPIAPSRGMIYDRNGTPLAFNRTIYQLEVMPEKVEDLKAELEALRPIVDITDEDLDNF QKERKRSRRFTSIPVKTALNEVQVARFAVNQFRFPGFEVKGYQRRFYPYGSALTHVIGYV SKINDKDVERLDKDGKLANYAATHDIGKLGIERYYEDVLHGKTGYEEVEVNNRGRVIRQL HEQPPQAGKDIYLTLDLNLQRYLEQLLAGSRAAVVVSDPRTGGILAMVSNPSYDPNLFVD GISSKDYQRLLNDPNRPLINRATQGLYPPASTVKPYIAVSALSAGVITKNYSLFDPGWWQ LPGSEKRFRDWKKWGHGRLNVTKALEESADTFFYQVAYDMGIDRLSEWLSKFGYGQYTGI DLSEERSGLMPTREWKQKRYKKPWYQGDTIPVGIGQGYWTATPIQMSKALNTLINDGNMK VPHLLYSTRINGQLVPYKQQESVQIGDIHSGYWEIAKDGMYGVANRANGTAHKYFANAPY KIAAKSGTAQVFGYETYNAHTLAEHLRDHKLMTAFAPYDNPQVSVAIILENGGAGPAVGT IVRQILDHIMLGDNNTTLPSETAPPPGVEGD >gi|316920349|gb|ADCU01000001.1| GENE 330 355155 - 355625 450 156 aa, chain - ## HITS:1 COG:YPO2605 KEGG:ns NR:ns ## COG: YPO2605 COG1576 # Protein_GI_number: 16122818 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 156 1 156 156 287 91.0 5e-78 MKLQLVAVGTKMPDWVQTGFTDYLKRFPKDMPFELIEVPAGKRGKNADIKRILEKEGEMM LAAVGKGNRIVTLDIPGKPWDTPELASQLERWKQDGRDVSLLIGGPEGLAPACKAAAEQS WSLSTLTMPHPLVRVLVAESLYRAWSITTNHPYHRE >gi|316920349|gb|ADCU01000001.1| GENE 331 355629 - 355946 304 105 aa, chain - ## HITS:1 COG:STM0642 KEGG:ns NR:ns ## COG: STM0642 COG0799 # Protein_GI_number: 16764019 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Salmonella typhimurium LT2 # 1 105 1 105 105 167 81.0 3e-42 MQGKALQEFIIDKIDDMKAQDIIAIDVAGKSSITDCMIVCTGTSSRHVHSIATHVVQEAR MAGLLPPRIEGENGAEWIVVDLGDVIVHVLQEESRRLYELEKLWS >gi|316920349|gb|ADCU01000001.1| GENE 332 356122 - 356784 428 220 aa, chain - ## HITS:1 COG:YPO2607 KEGG:ns NR:ns ## COG: YPO2607 COG1057 # Protein_GI_number: 16122820 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Yersinia pestis # 6 220 5 219 220 338 78.0 5e-93 MQNECSNATQLTALFGGTFDPIHYGHLKPVTAMANEVGLQNVTLLPNHVPPHRPQPEANA QQRLKMVELAIQGNPLFSVDERELHRTIPSYTIDTLEEVRRERGANAPLAFIIGQDSLLT LHKWHRWEEILHYCHLLVCARPGYSDRLDTPELQQWLEKHQVFDAKRLSQQPHGYIYLAD TPLLAISATDIRQRRHQGISCDDLLPRAVQRYIELQGLYR >gi|316920349|gb|ADCU01000001.1| GENE 333 356774 - 357808 765 344 aa, chain - ## HITS:1 COG:YPO2608 KEGG:ns NR:ns ## COG: YPO2608 COG1466 # Protein_GI_number: 16122821 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Yersinia pestis # 1 343 1 343 344 461 73.0 1e-129 MTRVYPEQLAAQLREGLRACYLVMGNEPLLLQESLDLIRQQAQQQGFTEYFSFSLDAHTD WESIFSLSQAMSLFASRQIISLTLPENGANAAIGEQLAKLATLLHSDLLLIIRGNKPTKA QENAGWFKTLSQNAAMISCQTPEQAQLPRWVATRAKQMNLQLDDAANQLICYCYEGNLLA LSQALERLSLLYPDGKLTLPRVEEAVSDAAHFSPFHWVDAILAGKSKRAWHILQQLRQED MEPVILLRTVQREVLLLLTLKSQMAHTPLRNLFDQHKVWQNRRPAMTQALQLLSLQQLYQ AVALLSHIEVILKQDYGQSVWSELESLTLLLCGKSLPESMLDAE >gi|316920349|gb|ADCU01000001.1| GENE 334 357805 - 358527 733 240 aa, chain - ## HITS:1 COG:YPO2609 KEGG:ns NR:ns ## COG: YPO2609 COG2980 # Protein_GI_number: 16122822 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rare lipoprotein B # Organism: Yersinia pestis # 17 233 18 206 207 199 52.0 5e-51 MTSLLKIAVLGLAVLTAGCGFHLRGNTSVPTEFQKITFDTSDPYGPLSRSIREQLRLSGI TIVDPKADDSSKDPVSTNSTSIVDNSAAAAKPADGSDKLPSLRIVGSSESKETVSIFKDG KTAEYQMVLNVSAQVLVRGHDLYPLTVRVYRSFFDNPLTALAKDSEQEMIRQEMRDQAAQ QLVRKLLSVHAAELQNNDNRMNAEVTAPKVQSANDFNSVSTDTTSTPANTTTATGSISAQ >gi|316920349|gb|ADCU01000001.1| GENE 335 358557 - 361139 2736 860 aa, chain - ## HITS:1 COG:YPO2610 KEGG:ns NR:ns ## COG: YPO2610 COG0495 # Protein_GI_number: 16122823 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Yersinia pestis # 1 860 1 860 860 1602 88.0 0 MQEQYRPEDIESHVQRHWDEKKTFQVTEDASKEKYYCLSMLPYPSGRLHMGHVRNYTIGD VISRYQRMLGKNVLQPIGWDAFGLPAEGAAVKNKTAPAPWTYDNIEYMKNQLKLLGFGYD WSREIATCDPDYYRWEQWFFTKLYEKGMVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCD TKVERKEIPQWFIKITAYADQLLNDLDTLENWPEQVKTMQRNWIGRSEGVEITFDVADSD EKVTVYTTRPDTFMGATYVAVAAGHPLAQQGAANNPELAQFIDECRNTKVAEAEMATMEK KGMATGLFAIHPLTGEKLPVWVANFVLMEYGTGAVMAVPAHDQRDWEFATKYGLQIKPVI LSLDGSQPDVHAEAMTEKGVLFNSGEFDGLDHEAGFNAIADKLVEKGVGERKVNYRLRDW GVSRQRYWGAPIPMVTLEDGTVIPTPEDQLPVILPEDVVMDGITSPIKADPNWAKTTVNG QPALRETDTFDTFMESSWYYARYTCPQYNEGMLNPEAANYWLPVDQYVGGIEHAIMHLMY FRFFHKLMRDAGLVNSDEPAKRLLCQGMVLADAFYYTGVNGERNWVSPVDVTVERDEKGR IIKAVDNEGREVVYAGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPAEMTLEWQE SGVEGANRFLKRVWKLVYEHTQKGACVDLSVAGLNEDQKALRRDLHKTIAKVSDDIGRRQ TFNTAIAAIMELMNKLARAPQETEQDRALMQEALLAVVRMLYPFTPHASFEMWTALGGEG DIDVAPWPVADEKAMVEDSKLIVVQVNGKVRGKITVAADATEQQVRELAGQEAQVAKYLD GVTIRKVIYVPGKLLNLVVG >gi|316920349|gb|ADCU01000001.1| GENE 336 361553 - 362035 559 160 aa, chain + ## HITS:1 COG:no KEGG:YE2995 NR:ns ## KEGG: YE2995 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 160 1 160 160 272 85.0 3e-72 MNKVAQYYRQWVAALTERLKNGERDIDALINSAEKQLNKAEDLTRDEVEQIKRAVRRDLE EFARSYEESKDELSDSVFMRVIKESLWQELADITDKTQLEWREVFKDVSHHGVYHSGEVV GLGHLVCEKCHYTLDFYTPEVLPLCPKCGHDQFHRKPFQP >gi|316920349|gb|ADCU01000001.1| GENE 337 362090 - 363022 831 310 aa, chain - ## HITS:1 COG:ybeK KEGG:ns NR:ns ## COG: ybeK COG1957 # Protein_GI_number: 16128634 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli K12 # 1 310 1 310 311 391 62.0 1e-108 MSTPIIFDCDPGLDDAIALAMALHSPELDIKAVTTSAGNQTPEKTLHNALGLLTLMQRTD IPVAGGASQPLMRKLMIADHVHGETGMGTTKLPSPSIKPNKLNAVELMAKILREAESAIT LVVTGPMTNAALLLAQYPELKAKISRIVFMGGGIDGGNATPAAEFNIIVDPEAAEIVLQS GVPLVMAGLNMTHQALVMADEVEQIRAINNPVAKAVAEMLDFYLPLYLSGPRKLPGAAMH DPCVVAWLLKPELFTSAHYWVGVETQGKYTTGMSVADVYNLTGNTPNTEVLLSVDRKGFV DLLLERVARY >gi|316920349|gb|ADCU01000001.1| GENE 338 363034 - 363984 889 316 aa, chain - ## HITS:1 COG:STM0661 KEGG:ns NR:ns ## COG: STM0661 COG1957 # Protein_GI_number: 16764038 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Salmonella typhimurium LT2 # 1 307 1 307 311 521 81.0 1e-148 MSLPIILDCDPGHDDAIALILALASPELELKAVTTSAGNQTPDKTLRNALRILTLLQRSD IPVTGGAVKPLMRELIIADNVHGESGLDGPDLPEPNFAPQTCNAVELIAQTLRASQQPVT VVATGPLTNIALLLTSHPELHAKIGRIVIMGGAAMLGNWTPAAEFNIYVDPEAAEIVFQS GLPIVMAGLDVTHRAQIMSEDIERFRHLSNPVADVVADLLDFFMEYHKQEKWGFQGAPLH DPCTIAWLIKPEIFTCVDRWVGVETQGKYTQGMTVVDYYSLTANQPNTTVMMDVDRQAFV DLLVERIGAAYANLAR >gi|316920349|gb|ADCU01000001.1| GENE 339 364187 - 364912 561 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 220 44 1e-55 MISLKNVSKWYGHFQVLADCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPIQKGEITV NGIQVNDKRTDLAKLRSKVGMVFQHFELFPHLSIIENLTLAQVKVLGREKSAAKSKGLKL LERVGLSSHADKFPSQLSGGQQQRVAIARALCMDPVAMLFDEPTSALDPEMINEVLDVMV ELAKEGMTMMVVTHEMGFARKVAHRVIFMDEGKIVEDRNKDDFFNNPESERAKDFLAKII H >gi|316920349|gb|ADCU01000001.1| GENE 340 364912 - 365586 574 224 aa, chain - ## HITS:1 COG:ECs0692 KEGG:ns NR:ns ## COG: ECs0692 COG0765 # Protein_GI_number: 15829946 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 223 1 223 224 325 85.0 5e-89 MYEFDWSSIVPSLPYLMNGMVITLKITLIAVVFGIIWGTILAVMRLSSFKLISWFATLYV NLFRSVPLVMVLLWFYLVVPSLLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAGI QSVSKGQSGASLALGMTHWQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADF FRTASTIGERDGTQVEMILFAGFVYFIISLAASALVNYLKKRTV >gi|316920349|gb|ADCU01000001.1| GENE 341 365586 - 366326 646 246 aa, chain - ## HITS:1 COG:YPO2614 KEGG:ns NR:ns ## COG: YPO2614 COG0765 # Protein_GI_number: 16122827 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Yersinia pestis # 1 246 1 246 246 429 87.0 1e-120 MSIDWNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSICAWIIAFFVGSIFGILRTVPNRF LSTIGMCYVELFRNVPLIVQFFTWYLVIPELLPADLGMWFKSELDPNVQFFVSSMLCLGL FTAARVCEQVRSGIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLV KNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLVMHFVERKIQLP GNMGSK >gi|316920349|gb|ADCU01000001.1| GENE 342 366317 - 366544 70 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLYSRSIQSIGDRLLTKLWAGRKGEIVPSPSLVAVVLSSNQKLLSPIFRVCGRLSNLKS DKRQPYITLGSYLCL >gi|316920349|gb|ADCU01000001.1| GENE 343 366667 - 367581 977 304 aa, chain - ## HITS:1 COG:YPO2615 KEGG:ns NR:ns ## COG: YPO2615 COG0834 # Protein_GI_number: 16122828 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Yersinia pestis # 1 301 1 302 305 485 82.0 1e-137 MQMRKLALSMLLIGMSSTMVHAADDQKSEATSDTLQKIKNNGVIVVGHRESSVPFSYYDN AQKVVGYSQDYSNQIVDAVKKQLNMPNLQVKMLPITSQNRIPLLQNGTFDFECGSTTNNA ERQQQAAFSNTIFVVGTRLLVKKGGDIKDFKDLAGKPVVVTSGTTSEILLNKLNEKDNMK MRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDQWEIVGTPQSHEAYGCML RKNDPAFKKLMDETIAKAQTSGEAAKSYERWFNQPIPPKNMNMNFALSDDMKALFKAPND QIAK >gi|316920349|gb|ADCU01000001.1| GENE 344 368115 - 368702 416 195 aa, chain - ## HITS:1 COG:mll0539 KEGG:ns NR:ns ## COG: mll0539 COG3576 # Protein_GI_number: 13470750 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase # Organism: Mesorhizobium loti # 8 181 3 179 203 165 42.0 5e-41 MQLNPEFIIADEQKLREHYAQPNKMVLQKQIDHIDSYARQLIEASPFVVISTIGEKGMDC SPKGGDEGFVQVADEKTLLLPDLPGNNRLDGISNLLHNPTIGLLFLIPGWSEAFRVNGTA QISVDPDLCKRFYVQENAARSVLVINVEEAFIHCGRAVTFGGLWDTERHINPKSLPSIME IAHAHIALSQAPSRD >gi|316920349|gb|ADCU01000001.1| GENE 345 368846 - 370369 1390 507 aa, chain - ## HITS:1 COG:YPO2616 KEGG:ns NR:ns ## COG: YPO2616 COG0815 # Protein_GI_number: 16122829 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Yersinia pestis # 4 507 6 511 515 718 71.0 0 MCSLLQRQWVRALLALILGAAGTLSFSPYDFWPAALISLIGLLAVTLNRTTKQAVGLGFL WGMGLFGTGINWVYVSIEQFGGMPTPVSMSLVVLLAAYLALYPMLFAGLLNRFWPTTNVW RLAIAAPALWQLTEFLRGWVLTGFPWLQFGYSQINGPLKGLAPIAGVDTITYLLMIISGL FVLALSLRKIAPAIVALALLLLPWPLRGIQWYQNQTDKAVNVAMVQGNIEQSMKWDPNAL ITTLQAYLDESRPYLGKAPIIIWPESAIPDTEKNQNQFLTMLDTLFRSHHSSLITGIVDE RMTHYGPTYYNTVIVLGEKEPYVYPSKNRYNKHHLVPFGEFVPMEDLLRPLAPFFNLPMS AFSRGDYIQPQLSVQGYKLTAAICYEIVLGEQVRANFRADTNFLLTVSNDAWFGHSIGPW QHFQMARMRALELGRPLLRSTNNGVTAAVDASGNVIAEIPQFERKVLEVNVAPTTGITPY VLFGSIPLWIITFAMAGVALIAGRKRR >gi|316920349|gb|ADCU01000001.1| GENE 346 370377 - 371261 922 294 aa, chain - ## HITS:1 COG:YPO2617 KEGG:ns NR:ns ## COG: YPO2617 COG4535 # Protein_GI_number: 16122830 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorC # Organism: Yersinia pestis # 1 291 1 291 292 480 91.0 1e-135 MSDDHSQNNDSPSPKKGFFSLILNQLFHGEPKNRGDLVELIRDSEQNDLIDPDTRDMLEG VMDIAEQRVRDIMIPRSQMVTLKRNQTLEECLDVIVDSAHSRFPVISEDKDHIEGILMAK DLLPFMRSDSEPFSIDRVLRAAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVT IEDILELIVGEIDDEYDEVEDRDVRQISRHMYTVRALTQIEDFNEAFGTHFSDEEVDTVG GLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQVHVKIPDESPQPKLDLED >gi|316920349|gb|ADCU01000001.1| GENE 347 371373 - 371846 583 157 aa, chain - ## HITS:1 COG:STM0668 KEGG:ns NR:ns ## COG: STM0668 COG0319 # Protein_GI_number: 16764045 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Salmonella typhimurium LT2 # 1 154 1 154 157 224 78.0 4e-59 MSNVILDLQIACENTEGLPAEADFRLWLEAVLPKFQEEAEVTIRLVDEAESHELNMTYRG KDKPTNVLSFPFEAPPGIELPLLGDMIICRQVVEAEAKEQEITLLSHWAHMVVHGSLHLL GYDHIIDEEAEEMEALEAEIMQELGYPDPYAAEKESD >gi|316920349|gb|ADCU01000001.1| GENE 348 371873 - 372931 1108 352 aa, chain - ## HITS:1 COG:YPO2619 KEGG:ns NR:ns ## COG: YPO2619 COG1702 # Protein_GI_number: 16122832 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Yersinia pestis # 1 344 20 363 370 563 84.0 1e-160 MNIITEELALEPADNQRLNSLCGPFDDNIKQLQRRLGIEISHRDNHFKLVGKSACVSAAK DILRHLYVDTAPMRGHIPDIIPEQVHLAIKESGVLEQVTDHVPEYGKAVNIKTKRGVIKP RTPNQAQYIANVLDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEK LGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLMERNVIEVAPLAYMRGRTLNDAFII LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRAQKSGLRHAIEVLSSVEEISFN FLTSEDVVRHPVVAQVVMAYEAWEIAEQKRKDEQAEQRKREAQTSASGQETH >gi|316920349|gb|ADCU01000001.1| GENE 349 373277 - 374701 494 474 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229230948|ref|ZP_04355465.1| SSU ribosomal protein S12P methylthiotransferase [Desulfotomaculum acetoxidans DSM 771] # 1 394 17 406 462 194 32 6e-48 MTQKLHIKTWGCQMNEYDSSKMADLLGSTHGFELTDNAEEADVLLLNTCSIREKAQEKVF HQLGRWKLLKEANPNVIIGVGGCVASQEGKLLRQRAHYVDIVFGPQTLHRLPEMINKVRG SKSPVVDVSFPEIEKFDRLPEPRAEGPSAFVSIMEGCNKYCTYCVVPYTRGEEVSRPADD VLFEIAQLAAQGVREVNLLGQNVNAYRGPSFDGDICTFAELLRLVAAIDGIDRIRFTTSH PIEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILNLMKRTHTVLEYKSIIRKLRKARPDI LISSDFIIGFPGETQEDFEQTMKLIAEVNFDVSYSFVFSPRPGTPAADMADDVPEEEKKQ RLYILQDRINQQAQSYSRKMVGTVQRILVEGISRKNVMEMSGRTENNRVVNFEGSPELVG TFVDVEITEVRTNSLRGVLVRTEDQMELRVHESPESVIARTRKEDALGVGSYQP >gi|316920349|gb|ADCU01000001.1| GENE 350 374986 - 376161 963 391 aa, chain + ## HITS:1 COG:ECs0700 KEGG:ns NR:ns ## COG: ECs0700 COG0654 # Protein_GI_number: 15829954 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 506 65.0 1e-143 MAEQKSDVVVIGGGMVGAATALGLAQAGFSVTVVENRRPRPFDPSQPPDLRISAISASSV ALLDSLGVWKDVRQMRSAAYRGLETWEWDASRVSFSAKDLGIPELGHMLENEVLQLALWQ HLEQMPNITLNVPAELKMLTRLNDGWGVSLNDGSQIEAKLVIGADGANSQVRSLAGIGVR GWQYRQSCMLISVQTQDDPLDVTWQQFTPQGPRAFLPLWENWASLVWYDSPARIRQLMAL PMTQLTQEIKHTFPERLGNVTAIAAGSFPLVRRHANRYVQEGLALLGDAAHTINPLAGQG VNLGYRDVDALLDVVIKARQQGEIWHSEEILKRYQRRRRPDNLLMQAGMDVFYAAFSNEL KPLQLIRNFGLMAAERSGELKKRALKYALGL >gi|316920349|gb|ADCU01000001.1| GENE 351 376388 - 376558 90 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKPVKKTDLWNWLGYEDSNLGMPESESGALPLGDTPNGGYDGIRTCDPIIMSDVL >gi|316920349|gb|ADCU01000001.1| GENE 352 377265 - 378932 1680 555 aa, chain - ## HITS:1 COG:YPO2623 KEGG:ns NR:ns ## COG: YPO2623 COG0367 # Protein_GI_number: 16122836 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthase (glutamine-hydrolyzing) # Organism: Yersinia pestis # 1 554 1 554 554 1043 88.0 0 MCSIFGVLDLKTDPVELRKKALELSRLMRHRGPDWSGVYASDNAILAHERLSIVDVNNGA QPLYNAAHTHVLAVNGEIYNHQALRQRFEGRYEFQTASDCEVILALYEEKGAAFLDELQG MFAFILYDADKNSYLIGRDHLGIIPLYMGYDEHGNFYVASEMKALVPVCRTIKEFPAGSY MSSDDGEIHSYYQRDWFEFDNVKDNVTDAAQLKEALEDSVKSHLMSDVPYGVLLSGGLDS SVISAITKKFAARRVEDDERSEAWWPQLHSFAVGLEGSPDLKAAQEVANHLGTVHHEIHF TVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMARKIKAMGIKMVLSGEGADEVFGGYLY FHKAPNAKEFHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRLNPKD KMCGNGKMEKYILRECFESYLPASVAWRQKEQFSDGVGYSWIDTLKETANQQISDQMLAN AHFRFPYNTPNSKEGYLYREIFEELFPVPSAAECVPGGPSVACSSAKAIEWDESFKKMDD PSGRAVGVHQSAYQK >gi|316920349|gb|ADCU01000001.1| GENE 353 379261 - 380013 803 250 aa, chain - ## HITS:1 COG:YPO2624 KEGG:ns NR:ns ## COG: YPO2624 COG0647 # Protein_GI_number: 16122837 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Yersinia pestis # 1 250 1 250 250 456 86.0 1e-128 MTIKSIICDIDGVLMHDNTPVPGADKFLARIQERDIPLVILTNYPSQTAQDLANRFSAAG LEVPESAFYTSAMATADFLKRQEGKKAYVIGEGALIHELYKAGFTITDINPDFVIVGETR SYNWEMIHKASYFVVNGARFIATNPDTHGRGFYPACGALCAPIELISGRKPFYVGKPSPW IIRAALNKMQAHSESTVIIGDNLNTDILAGFQAGLETILVLSGVSTLNDVDNMPFRPNYI YPSVADIDII >gi|316920349|gb|ADCU01000001.1| GENE 354 380344 - 381576 284 410 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 155 395 71 317 323 114 29 1e-23 MTTGGQGQIGNVDLVKQLNSAAVYRLIDLQGPISRIQIAEVSQLAPASVTKITRQLLERG LIKEVDQQASTGGRRAISIVTETRLFNTIAIRLGRHDATITLYDMSGKALAEEHYPLPER TQETVENALLNNIEQFMLAYQRKIRELIAIAVILPGLVDPQHGIVRYMPHIAVNDWQLVS VLEDRFNVTSFVGHDIRSLALAEHYFGATRDCEDSMLVRLHRGTGAGIIVNEKIFLGSKG NVGEIGHIQIDPLGERCHCGNFGCLETVAANAAIEQRVRHLLEQGYPSKLTLDDCSISAI CKAANKGDALATEVIELVGRYLGRAISIAINMFNPQKVVIAGEIIEAEKTLLPAIQSCIN TQVLKNFRQNLPVVTSELDHRSAIGAFALVKRAMLNGVLLQRLLEGQHPH >gi|316920349|gb|ADCU01000001.1| GENE 355 381652 - 382803 981 383 aa, chain - ## HITS:1 COG:YPO2626 KEGG:ns NR:ns ## COG: YPO2626 COG1820 # Protein_GI_number: 16122839 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Yersinia pestis # 1 379 1 379 381 606 77.0 1e-173 MYALTHCRIYTGHDILDDHAVMIANGLIKQICPVAELPSGIETHDLGGAILAPGFIDLQL NGCGGVQFNDSAEAVSEETLEIMQHANEKSGCTSYLPTLITCADDLMKHGIDVMRSYLAK HQNQALGLHIEGPYISLEKKGTHNPKFIRKPDHEMIDFMCEHADAIAKVTMAPEVATPES IKQLKAAGIVVSAGHSNATYEEGRKGFAAGMSFATHLYNAMPVIAGRAPGLMGAIFDTPE VYAGIIADGHHVAWPSIRLAKRLKGEHLVLVTDATAPAGANIDHFIFAGKTVYYRNGLVV DENGTLSGSALTMIEAVQNSVEHVGIALDEALRMATLYPARAVGIDTQLGSIEEGKVANL TAFTSDYRVIKTIVNGETVYENK >gi|316920349|gb|ADCU01000001.1| GENE 356 382831 - 383631 701 266 aa, chain - ## HITS:1 COG:STM0684 KEGG:ns NR:ns ## COG: STM0684 COG0363 # Protein_GI_number: 16764054 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Salmonella typhimurium LT2 # 1 266 1 266 266 482 84.0 1e-136 MRLIPLSNAADVGLWSARHIVNRINAFKPTAERPFVLGLPTGGTPLQTYKRLIELHKAGE VSFKNVVTFNMDEYIGLPEEHPESYHSFMYNNFFNHVDIPRENINLLNGNAPDVDTECRR YEEKIKSYGKINLFMGGVGNDGHIAFNEPASSLASRTRIKTLTEETRIANSRFFDGDMTK VPKYALTVGVGTLLDAEEVMILVTGHAKAQSLQAAVEGSVNHMWTISALQLHPKSVIVCD EPSTMELKVKTVKYFRELEAENMKNL >gi|316920349|gb|ADCU01000001.1| GENE 357 383963 - 386002 2023 679 aa, chain + ## HITS:1 COG:YPO2628_1 KEGG:ns NR:ns ## COG: YPO2628_1 COG1263 # Protein_GI_number: 16122841 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Yersinia pestis # 2 411 1 409 410 702 89.0 0 MVSILGYLQKVGRALMVPVATLPAAAILMGVGYWIDPVGWGGDNALAAFFIKSGSAIIDN MSVLFAIGVAYGMSKDKDGAAALTGFVGFLVLTTLCSPAAVAMIQKIPADQVPAAFGKIN NQFVGILVGIISAELYNRFSGVELPKALSFFSGRRLVPILTSFVMILVAFILMYIWPLIF DGLVNFGEHIQKMGSVGAGIYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGAQS IEAGKAVVGITGRYQAGFFPIMMFGLPGAALAIYHCARPENKAKVAGIMMAAAFAAFFTG ITEPLEFSFMFVAPVLYVIHALLTGISVFIAASMHWIAGFGFSAGLVDMVLSSRNPLATH WYMLIPQGLVFFVIYYVVFRFTITKFNLLTPGRELATDADESADGYDLDLDNAKGGNETA NLARNYIAAVGGSANITGIDACITRLRLTVKDSAIVNDSLAKRLGASGVIRLNKQSVQVI VGTRAEAIATAMRGVMAAGPVEAATAHAAPAATEAKAQATPNAAAVVKATLVSPITGEVV ALDQVPDEAFASKAVGDGVAVRPTDKFVVSPARGTIVKIFNTNHAFCLETDEGAEVVVHM GIDTVSLNGQGFKRLVEEGAEVKAGQPILEMDLDYLNANARSMISPVVVSNIDDFGGLKE LAAGHVVAGETKLYDITAK >gi|316920349|gb|ADCU01000001.1| GENE 358 386245 - 387912 1580 555 aa, chain + ## HITS:1 COG:YPO2630 KEGG:ns NR:ns ## COG: YPO2630 COG0008 # Protein_GI_number: 16122843 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Yersinia pestis # 1 551 1 550 555 1036 88.0 0 MSEAEARPSNFIRQIIDEDLASGKHNSVHTRFPPEPNGYLHIGHAKSICLNFGIAKDYQG QCNLRFDDTNPVKEDIEYVESIKRDVQWLGFEWSGAVRYSSDYFDQLHQYAIELITKGLA YVDELTPEQIREYRGTLTSPGKNSPYRDRSVEENLALFEKMRNGEFAEGTACLRAKIDMA SPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRL YDWVLDNITIPTHPRQYEFSRLNLEYAIMSKRKLNQLVTEKIVEGWDDPRMPTISGLRRR GYTAASIREFCQRIGVTKQDNNVEMAALESCIRDDLNEIAPRAMAVLDPVKVVIENMPAD SVEMIAMPNHPNKPEMGKREVPFSSEIYIDRADFREEANKQYKRLVLGKEVRLRNAYVIK AERVEKDAEGEITTIYCTYDPDTLSKDPADGRKVKGVIHWVSASHAVPAEFHLYDRLFSV ANPGAAEDFLSTINPESLVIRSGFVEPSLGEATSDVTYQFEREGYFCADCRYSKPDHLVF NRTVGLRDTWAKAGV >gi|316920349|gb|ADCU01000001.1| GENE 359 388481 - 389866 1556 461 aa, chain + ## HITS:1 COG:no KEGG:ECL_03034 NR:ns ## KEGG: ECL_03034 # Name: not_defined # Def: putative outer membrane porin # Organism: E.cloacae # Pathway: not_defined # 1 461 1 465 465 728 81.0 0 MVTHRVRRNALTLAITGVLLGSGFYSMPEAKAEGFIDDSTLTGGIYYWQRERDRKDVTTG NYETNLNHSTWNANLDFSSGYAADMFGIDIAAFTAIEMAENHDSGHPNEIAFSSKNKGYD EDYSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANFD YGDAGALSFSYMWTDKYKAPWHTEVDGFYQNDKKTGVSYLHSLGAKYDFKNDFILEAAFG QAEGYIDQYFAKGSYKFDVAGNPMTTSYQFYGTRDRVHDGGVNDIYDGTAWLQALTLGYK VGQFDFRLEGTYVKAEGNQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAIFGGVM YDLSKWDMPGFAVGGSYVYAWDAKPSTNPQYDQSQRVKESAYSLDAMYTIQDGRAKGTLF KLHFTQYDNHSDNPSWGGGYGNMFQDERDVKFIVIAPFTIF >gi|316920349|gb|ADCU01000001.1| GENE 360 389924 - 390253 397 109 aa, chain + ## HITS:1 COG:no KEGG:Spro_1231 NR:ns ## KEGG: Spro_1231 # Name: not_defined # Def: putative lipoprotein # Organism: S.proteamaculans # Pathway: not_defined # 1 109 1 108 108 131 68.0 6e-30 MKKTLLVIAAVVGLSGCVQQSTAPQEDLKLKQAYSNCINTAEGNPDKVDACQSVLNVLKQ SKQHQAFAEKESVRVFDYQNCIQAAKTGAGDNYQQACGKVWQEIRNNNN >gi|316920349|gb|ADCU01000001.1| GENE 361 390274 - 392946 2675 890 aa, chain + ## HITS:1 COG:VC2217 KEGG:ns NR:ns ## COG: VC2217 COG3525 # Protein_GI_number: 15642215 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetyl-beta-hexosaminidase # Organism: Vibrio cholerae # 1 889 1 883 883 1027 57.0 0 MSKFKLSTLAVAVSALGMLGFSTVSQADQNVVDQLSQLKVNVKVTDNRAAENGVDCAALG ADWAACNQSVITLTSDSDIKAKDWAIYFHNPRQVLDVKNDQFKITFVTGDLHKIEPTDKF KGFTAGQAVEIPLIGEYWQLFESDVMPRWYVTSQDAKPKVIASTDTEDLRQFVTPFAGDL WKRTKDDKNVLMVPETRFDKNADVKQLPAQSLRGQIMPTPMEVKIHQQDVDLSKGVALDL TVLNKATAEAAQQRFALLGVKDNANGYPIKTTIAAKSFKGDLAVPGAYELKIGPKGTEVI GYDQAGVFYGLQSILSLVPSDGSMKIATLDAKDAPRFQYRGIFLDIGRNFHSKEAVHRLL DQMAAYKMNKFHFHLTDDEGWRIEIPGLPELIDVGSKRCHDLSEKECLLPQLGSGPDANN NGTGHLTRDEYIDIVKYAQARQIEVIPEIDMPAHARAAVVSMEARYDKLKAAGDEKGANE FRLVDPTDTSNTTSVQFYDRKSYLNPCLDSSKRFVDKVIGEIAQMHKEAGQPLTTWHFGG DEAKNIRLGPGYQDKNGKIEPGKGIIDQSKEDKPWAQSQVCQTLIKSGKVEDMEHLPSHF AIEVSQIVNKHGIEKMQAWQDGLKDAKDSKAFATKRVGVNFWDTLYWGGFDTVNDWANKG YEVTVSNPDYVYMDFPYEVNPQENGYYWGTRFNDERKIFSFAPNNMPQNAETSVDRDGAF FTAKSDKPWPGVYGLSAQLWSETTRTDEMMEYKIYPRVMTVAERSWHRAGWEQDYKAGRE YKGGETNLVDKKSLLSDWQRFANLMGQRELAKMDKAGIGYRLPVPGAKVVGGKLEANVAL PGVGIEYSVDGGKQWQRYDAKAQPTVSGDVQIRSVSPDGKRYSRAEPVQA >gi|316920349|gb|ADCU01000001.1| GENE 362 393200 - 393649 364 149 aa, chain - ## HITS:1 COG:ECs0714 KEGG:ns NR:ns ## COG: ECs0714 COG0735 # Protein_GI_number: 15829968 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Escherichia coli O157:H7 # 1 148 1 148 148 256 90.0 1e-68 MTDNNTALKKAGLKVTLPRLKILEVLQDPTCHHVSAEDLYKKLIDMGEEIGLATVYRVLN QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDDSIEKRQHEIAKKYGI QLTNHSLYLYGHCSEGDCREDETLHDSKA >gi|316920349|gb|ADCU01000001.1| GENE 363 393969 - 394496 538 175 aa, chain - ## HITS:1 COG:YPO2635 KEGG:ns NR:ns ## COG: YPO2635 COG0716 # Protein_GI_number: 16122846 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Yersinia pestis # 1 175 1 175 175 318 88.0 4e-87 MAIVGIFFGSDTGNTENIAKMIQKQLGKDVAEVHDIAKSSKEDIEAFDILLLGIPTWYYG EAQCDWDDFFPSLEEIDFNGKLVALFGCGDQEDYAEYFCDAMGTIRDLIEPRGATIVGHW PTAGYHFEASKALVDDKTFVGLAIDEDRQPELTAARVDAWVKQISDEMSLSEITG >gi|316920349|gb|ADCU01000001.1| GENE 364 394618 - 394893 338 91 aa, chain - ## HITS:1 COG:no KEGG:YE2970 NR:ns ## KEGG: YE2970 # Name: not_defined # Def: LexA regulated protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 91 1 91 95 107 84.0 1e-22 MAKEQTDRTTLDLFADERRPGRPKTNPLSRDEQLRINKRNQLRRDKVKGLRRVELKINEE AVEMLNRLAQEQNISRSELIEQILLDQILKS >gi|316920349|gb|ADCU01000001.1| GENE 365 395207 - 395977 750 256 aa, chain - ## HITS:1 COG:YPO2638 KEGG:ns NR:ns ## COG: YPO2638 COG0596 # Protein_GI_number: 16122848 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Yersinia pestis # 1 254 1 254 255 337 62.0 2e-92 MKLNYREHLPSQQAQFPPTLLIHGLFGSLDNLGILGRDLRSDRKIIQVDMRNHGHSPRSE RMDYAAMAEDLLELIDDLSLPQLDVIGHSMGGKAAMTLAALAPERIRRLALLDIAPVDYK VRRHDTIFTAINAVTDSQVTRRQDAADVMRHYLQEEGVIQFLLKSFQDGAWLFNVPALWE QYENIVGWQDVAPYQGPVMFIKGGLSPYIQDSHREAIARQFPHARAHVIAGVGHWLHAEK PELVLRTLHRFLDSDI >gi|316920349|gb|ADCU01000001.1| GENE 366 396245 - 396787 433 180 aa, chain + ## HITS:1 COG:seqA KEGG:ns NR:ns ## COG: seqA COG3057 # Protein_GI_number: 16128663 # Func_class: L Replication, recombination and repair # Function: Negative regulator of replication initiationR # Organism: Escherichia coli K12 # 1 180 1 181 181 257 76.0 9e-69 MKTIEVDEELYRYIASHTQSIGESASDILRRLLKVSAEHKATTAPVVAPVVTAAPATAVV TARPVDRVRTMRELLLSDEYAEQNKAVNRFMLVLSTLYSIDNQGFAAATESLHGRTRVYF AGDQQTLLQNGTHTKPKHVAGTPYWVITNTNTGRKRSMIEHIMQAMQFPAELIEKVCGTI >gi|316920349|gb|ADCU01000001.1| GENE 367 396865 - 398511 1463 548 aa, chain + ## HITS:1 COG:YPO2686 KEGG:ns NR:ns ## COG: YPO2686 COG0033 # Protein_GI_number: 16122891 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Yersinia pestis # 1 548 1 547 547 962 85.0 0 MANHPRAGQLAQQSDLINVAQLVSQYYVLTPEAGNTSHAVKFGTSGHRGSAQRHSFNEAH ILAIAQAIAEVRKANGVEGPCFVGKDTHALSEPAFISVLEVLTANGVDVVVQQDNGFTPT PAVSHAILTHNSNKNAALADGIVITPSHNPPEDGGIKYNPPNGGPADTDLTKVIEQRANE LLSLNLQGVKRQTLDAAWNSGLVHAKDLVQPYIEGLVDIVDMPAIQRSGLHLGVDPLGGS GIEYWQRIGEHYKLDLTLVNDHVDPSFRFMHLDHDGVIRMDCSSESAMAGLLALRDQFDL AFANDPDYDRHGIVTPSGLMNPNHYLAVAINYLFQHRPQWGADVAVGKTLVSSAMIDRVV NDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFNGTPWSTDKDGIIMCLLAA EITAVTGENPQQHYNKLAERFGAPSYNRIQAPATHAQKDALSKLSPEMVKADKLAGDPIT ARLTKAPGNNASIGGLKVMTDNGWFAARPSGTEEAYKIYCESFLGAEHRQRIEKEAVDIV SAVLASAK >gi|316920349|gb|ADCU01000001.1| GENE 368 398646 - 398966 386 106 aa, chain + ## HITS:1 COG:no KEGG:YPDSF_0648 NR:ns ## KEGG: YPDSF_0648 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 94 1 94 106 134 71.0 8e-31 MPGYRYRITVEPIADRKGEPIDKAPISFEVENHDEILSIVERLGARDDLPFTGDKSKAFA VGLKLFSESLLENRKHPLFDDLRDAFRAFMMTLKGIKRGESQDEQK >gi|316920349|gb|ADCU01000001.1| GENE 369 398991 - 399680 547 229 aa, chain - ## HITS:1 COG:YPO2688 KEGG:ns NR:ns ## COG: YPO2688 COG0745 # Protein_GI_number: 16122893 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Yersinia pestis # 21 228 1 208 209 355 82.0 5e-98 MNQTPINILIVEDEKEIRRFVRSALENEGWRVFDADTLQRGLIEAGTRKPDLIILDLGLP DGDGLDFIRDLRQWSSIPVIVLSARAEESDKVLALDAGADDYLSKPFGVAELLARVRVSL RRHAQQNQESPLIQFSDIEVDLINRRVTRAGEDLHLTPIEFRLLTELIANAGKVLTQRQL LSSVWGPNYVEHSHYLRIYMGHLRQKLEAEPARPKHLLTETGVGYRFML >gi|316920349|gb|ADCU01000001.1| GENE 370 399691 - 402381 2040 896 aa, chain - ## HITS:1 COG:YPO2689 KEGG:ns NR:ns ## COG: YPO2689 COG2205 # Protein_GI_number: 16122894 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Yersinia pestis # 4 895 3 893 908 1357 75.0 0 MVDDEELRRPDPDALLAQVCEKPRGKLKVFFGACAGVGKTYAMLQEAQRLRAQGLDVLVG VVETHGRSETAAQLDGLEVLPLKRIHHRGRQVREFALDQALARHPALILMDELAHSNAAG SRHPKRWQDVEELLDAGIDVLTTVNVQHLESLNDIVGSVTGIRVRETVPDRIFDDASEIV LVDLPPDDLRQRLNEGKVYIPGQAERAIEHFFRKGNLIALRELALRRTADRVDEQMREFR SSQDKERVWHTRDAILLCIGHHVDNDKLVRTASRLAVRLGCIWHAVYVETPRLHRLPENQ RRAILRSVKLAQELGAETTTLSDPNEEKAILRYAREHNLGKIIIGRRNKKEWRWWWHESF ADRLAKLGPDLDLIIVAVEDKPRTASKEQDARPFSEKWRVQIRGCLVAVALCALITLLAK IIFPSFDQANIVMVYLLGVVVVALFYGRWPSVLSAVVSVASFDLFFVMPQWSFAVSDVQY LVTFGVMLTVGIVIGNLTAGVRYQARVARYRELRARHMYELSKALSNAITNEDIARSGSY FLNSSFNARTSVLIPSDDTPLVQITPPQEGVAGVDFAIAHWCFDKQQPAGAGTDTLPGVP YQLLPLSTAQQAFGVLAIEPINLRQLMVPEQQRLLQTYAVMIASALERLHLAQTAASARL DTEREQLRNSLLAALSHDLRTPLTVLFGQAEILTLDLAAEKSPHAQQANQIRQQILNTTR LVNNLLDMARIQSGGFNLRKEWQSLEEIVGSAVNTLEPMLNSHPLNIDLPADLPLVNCDG NLIERVIQNLLENAGKYAGSESPLTIRAQASEHWLEVEIEDRGAGIPSEQLQLIFNKFTR GDKESAIPGVGLGLAICRAIIEVHGGKIWAENIAQGGACFHFTLPLEAPPAIEEEF >gi|316920349|gb|ADCU01000001.1| GENE 371 402405 - 403001 591 198 aa, chain - ## HITS:1 COG:STM0704 KEGG:ns NR:ns ## COG: STM0704 COG2156 # Protein_GI_number: 16764074 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Salmonella typhimurium LT2 # 4 191 4 191 194 192 58.0 5e-49 MSLLRPSIMMMLILTAITGIAYPLLTTGLAQVMFNSQANGSVIEHEGVAVGSRLIGQNFT QAKYFWGRPSATADTPYNPQASGGSNLAVSNPQLDKNLQARATLLRQADPLAPASIPVDL MTSSGSGLDPHISPLAAYYQAERVAKARDLPLASVEKLIALNTKRSMPNFIGQPVVNVLE LNMALDALLPHNTTGNPS >gi|316920349|gb|ADCU01000001.1| GENE 372 403185 - 405251 2053 688 aa, chain - ## HITS:1 COG:YPO2691 KEGG:ns NR:ns ## COG: YPO2691 COG2216 # Protein_GI_number: 16122896 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Yersinia pestis # 1 688 1 688 688 1108 88.0 0 MTRKQRALFEPKLVRTAIKDAFKKLDPRIQWRNPVMFVVYLGSILTTIIWLSILIGQSEG SAAFTGSVAIWLWFTVLFANFAEALAEGRSKAQAESLKGVKKTSWAKKLASSEHDAAQEK VSADSLRKGDIVLVEAGDTIPCDGEVIEGGASVDESAITGESAPVIRESGGDFSSVTGGT RILSDWLVIQCTVNPGETFLDRMIAMVEGAKRRKTPNEIALTILLIALTLVFLLATATLY PFSLFSAEASQVGVPVTITVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRA VEAAGDVDVLLLDKTGTITLGNRQATEFLPVPGVSEEALASAAQLASLADETPEGRSIVV LAKQRFNLRERDLHALGATFVPFSAQTRMSGVNVQGRMIRKGSVDAIRRHVESNQGQFPR AVDERVESVARTGGTPLVVAEDGRILGVVALKDIVKGGIKERFSELRRMGIKTVMITGDN RLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVA MNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAA FAATYPQLNALNVMHLTSPASAIMSAVIFNALIIVFLIPLALKGVSYKPLSASALLRRNL WVYGAGGLLVPFIGIKLIDMLLTVCGLA >gi|316920349|gb|ADCU01000001.1| GENE 373 405263 - 406951 1452 562 aa, chain - ## HITS:1 COG:YPO2692 KEGG:ns NR:ns ## COG: YPO2692 COG2060 # Protein_GI_number: 16122897 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Yersinia pestis # 1 560 1 560 562 833 82.0 0 MAASAFLLIAVFLVVLFALALPLGRMLARLIDGEPFVAMRRFENGLWRCCGILPQEMTWL QYLLAVMAFNLLGLFVLFILLMTQDVLPLNPQHMPGLSWDLALNTAVSFVTNTNWQAYSG ENTLSYFSQMAGLSVQNFLSAATGIAVVFALIRGFARHSATTLGNAWVDIFRITVYVLLP ISIIIALFFVSQGVLQNLHGYVTVHTLEGSTQLLPMGPVASQEAIKLLGTNGGGFFGSNS SHPFENPTALSNMVQMLAIFLIPAALCFAFGQSVGENRQGHTLLWAMSLIFIVAVIVVMY AELQGNPHLSALGADSNFNMEGKETRFGILATAMYSVVTTAASCGAVNAMHDSFTALGGM VPMWLMQIGEVVFGGVGSGLYGMLLFVLLTVFIAGLMIGRTPEYLGKKIEVFDMKMTAAA ILVTPALVLIGSAVALMTDAGRAGILNPGAHGFSEVLYALSSAANNNGSAFAGLSVNTPF YNVLLAIAMFLGRFGVIIPVMAIAGSLVAKKRQPAGNGTLPTQGALFIGLLVGTILLVGA LTFIPALALGPVAEHLQVWLTR >gi|316920349|gb|ADCU01000001.1| GENE 374 407300 - 407797 286 165 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLAVYQIHTFLYALLQQTQIALQQQEIQKFICTSSHSATQRLMLDRATTPLLLSALLFNR QMNRLKANESEQAAQVWKTLCLPLKQFPSSGRLLLNEKTNEPELKRRLTHLAVGLGGTEL RVLRGFSWLVLYLFNGYEVCLLCLIESSLFSEEVLDAYFSQFLLI >gi|316920349|gb|ADCU01000001.1| GENE 375 408049 - 408249 165 66 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_2887 NR:ns ## KEGG: NT01EI_2887 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 66 1 66 66 98 75.0 7e-20 MYQQYSLSRILLRRCGVVIAGVLALPVMLFRSDRARFYSYLHRVWSKTSDKPVWLAQSEQ VTADFY >gi|316920349|gb|ADCU01000001.1| GENE 376 408450 - 409397 690 315 aa, chain + ## HITS:1 COG:VCA0055_1 KEGG:ns NR:ns ## COG: VCA0055_1 COG1683 # Protein_GI_number: 15600826 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 2 152 8 160 161 197 58.0 3e-50 MTEKIPVGVSACLLGENVRFDGGHKRLPFAVDELAPFVRFEAICPEMAIGLPSPRPTLRL IKQGDDVALVNSRDGEGDVTQKMREFSKQKVASLEHLCGYIVCAKSPSCGMERVKVYTEH DARKSGVGIFTQQLMERLPWLPVEEDGRLYDPDLRENFVERIYALHEFNQLWQQGLTRGA LVAFHSRYKLSLLAHSQPEYRELGRFVAAMEQWESLDEYAYEYRNRFMALLKHKASRRNH TNVLQHVQGYFRRQLTSSQRQELADLILRYRQGTQPLLAPITLLRHYLNEYPDSYLAGQR YFDPYPEVLRLRYGH >gi|316920349|gb|ADCU01000001.1| GENE 377 409452 - 410882 831 476 aa, chain + ## HITS:1 COG:YPO2695 KEGG:ns NR:ns ## COG: YPO2695 COG0415 # Protein_GI_number: 16122900 # Func_class: L Replication, recombination and repair # Function: Deoxyribodipyrimidine photolyase # Organism: Yersinia pestis # 3 473 2 473 487 686 71.0 0 MTATHVVWFRNDLRITDNRALHAACQDPQAKVIAVYIATPEQWKQHDMAPRQAAFIHQNL QCLVHALAGKNIPLFYHQCTDFTASAKWLVDFCQKNEVTDLFYNRQYELNERRRDDAVTE LLAGVCGIHSFDDALLLPPGSVVTGSGEMYKVFTPFRNAFLQRLTHSDVRSLPAPKTREQ ACEMSEIKPFDYSQQGLDSVLFPAGEEAALQRLRVFCREHVQDYAQQRDIPAVDGTSVLS PYLAVGVLSPRQCLNRLLAECPDTLEDGESGAFVWLNELVWREFYRHLLVAHPKLCRHKP FIAWTDHVHWSGDIEHLTAWQQGETGYPIVDAAMRQLNHTGWMHNRLRMIVASFLVKDLL INWRAGERYFMSQLIDGDLAANNGGWQWAASSGTDAAPYFRIFNPTTQGERFDKKGDFIR RWLPELADVPDSDIHHPHQWAMKQCRVLDYPQPLVDHALARKQTLQAFEDAKRRAG >gi|316920349|gb|ADCU01000001.1| GENE 378 410917 - 411900 798 327 aa, chain + ## HITS:1 COG:YPO2696 KEGG:ns NR:ns ## COG: YPO2696 COG5212 # Protein_GI_number: 16122901 # Func_class: T Signal transduction mechanisms # Function: Low-affinity cAMP phosphodiesterase # Organism: Yersinia pestis # 19 327 35 342 343 367 58.0 1e-101 MRKTLIAVLLAGYSAFTWAGFDVVALGTQGGASGDNLTSYLIRTDGDARYIALDAGSVLT GIAKGVEKGSFPDVTAEKAAPLTQQGYVFREQINAYFISHPHLDHVAGLVLGSPDDKKKT VYSLADSANTLHNHYFNWKSWPNFSDSGNGERLGTYRINAPRVGQIFTLGTTSMRGVIYP LSHDGTVSSMLLIHSPRGESFAYFGDTGADAQEKSKNLDAVWRVLGPLIQQKSLKGMIIE TSYDNQQPDKKLFGHLTPKLLLSELTNLEKYSGGEGALKDFPVVVSHIKSTMVAGKDPLA LIQQQLSEGNSLGVNFIYMQQGDKAEF >gi|316920349|gb|ADCU01000001.1| GENE 379 411932 - 412675 874 247 aa, chain + ## HITS:1 COG:YPO2697 KEGG:ns NR:ns ## COG: YPO2697 COG0327 # Protein_GI_number: 16122902 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 247 2 248 248 369 71.0 1e-102 MNNIELEKLLDRHLSADEFRDYAPNGLQVEGRQEIKKVVTGVTACQALLDAAVAEQADAI LVHHGYFWKNDAPTVRGMRRHRLKTLLINDINLYGYHLPLDAHPVLGNNAQLARAMKIKP LGLLDPLLPYGEFEQPMSAGEVIGRLERKLQHSVLHSGDNAPLEIRRVAWCTGGGQSYIE QAAEFGVDAFISGEVSEKTIHIAREMGLHFFAAGHHATERGGIRALGEWLATEHGLDVKF IDIPNPA >gi|316920349|gb|ADCU01000001.1| GENE 380 412733 - 413068 272 111 aa, chain - ## HITS:1 COG:ECs5090 KEGG:ns NR:ns ## COG: ECs5090 COG2824 # Protein_GI_number: 15834344 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 197 90.0 5e-51 MQLPSCPKCNSEYTYQDNDMYICPECAYEWNDSAPAEESDELVVKDANGNLLVDGDSVTV IKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGQMKLKSEFVKKN >gi|316920349|gb|ADCU01000001.1| GENE 381 413308 - 414243 746 311 aa, chain - ## HITS:1 COG:YPO1169 KEGG:ns NR:ns ## COG: YPO1169 COG0583 # Protein_GI_number: 16121465 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 16 303 7 294 297 244 43.0 1e-64 MPNTPIAQLASNVHSNGRISLRMLRYFQVLADELHFGRAAAQLNISQPPLSTQIKELEDI LEIKLLERNSRKVALTHAGRVLKTEVDRILSATETSLNYVRQIGRNENQHLNIGIIGTAL WGALLPALKAFRVDYPHATWTLHELPQQRQIEQIMQHTIDIGINRNVAIQSTPNISYQHI SRESVMVALLEHDPLCQFESLDLMQLAERPFISLSFSHSDFAQQLYDYCVQVGFYPLIAQ QAMEPQTVLALVSAGLGIALLPETCSLIHWPGVKFMPLNQQIPADLYALYLREHQSPIAH AFLQALGKMTE >gi|316920349|gb|ADCU01000001.1| GENE 382 414361 - 415575 960 404 aa, chain - ## HITS:1 COG:YPO0163 KEGG:ns NR:ns ## COG: YPO0163 COG0477 # Protein_GI_number: 16120506 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 7 384 5 379 394 166 29.0 8e-41 MTESSFSRVNMNAISYLSYYFVGALVSTLGIVLGPLCDAFHKDYSFIGQVFTLMNLGMFL PIMLGGILMKKWGLQKPLIVASVITIIVSILLFISPTLTVFSVAVTLIGACGGVFMTIGS YLVVRINPEEKKRSSSLIFTDFFFSLAGATLSIVLAWVFKLGANWLAMYAIMGAIGALML SIALRSRFPTTEAPVETSNQHAKATAESWGPAVYLLCFALFAFLLAEPIFTMWTPTYLQD RFHMTQQDAALFAACYWWAKATGLFVNQFTVKLMKLRTFLLACTVVGMASILVITTSANT QLIMVACGVFGFFNSGLFSGLMSYGSLQVRQSPPTLISALLTCGTVGTLLFATVSSLMNS YYGLHWALGTAAISYALLLIALLAAMACSRAEKIAQTQSIKPSL >gi|316920349|gb|ADCU01000001.1| GENE 383 415772 - 416608 666 278 aa, chain - ## HITS:1 COG:xapA KEGG:ns NR:ns ## COG: xapA COG0005 # Protein_GI_number: 16130333 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Escherichia coli K12 # 1 273 4 273 277 385 71.0 1e-107 MSFSHCDNFPFHAAEIIRAAKPNFQPRIALILGSGLGVFADQLDNKTAISYQDLPGFPVS TVVGHAGELVLGSISGVDVVCMKGRGHFYEGKGMGIMTPAVRTFKLLGCEFLFCTNAAGS LNTGIPAGSLVALNDHINTMPSTPLVGPNDERFGPRFFSLANAYDAELRGRLHQTASSLD LKLHEGVFVSYPGPNFETAAEIRMMQMIGGDVVGMSVVPEVIAARHCGLKVLAVSAITNM AEGLSDVELSHEQTLKCAAMVTDDFVRLIGTFVAGYAN >gi|316920349|gb|ADCU01000001.1| GENE 384 416908 - 417564 564 218 aa, chain + ## HITS:1 COG:ECs0736 KEGG:ns NR:ns ## COG: ECs0736 COG2049 # Protein_GI_number: 15829990 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Escherichia coli O157:H7 # 1 218 1 218 218 297 69.0 1e-80 MQKARCYLLGERAAVLELEPPLSLESQKRIWSLATRLREYPNVSEVIPGMNNITLLLSVP ETEPVEVLDKLQQWWEESESVQPEVRHIDIPVVYGGAEGPDLEEVALFHGLTERQVVELH SSAEYVVYFLGFQPGFGYLGGLPEALHTARRGVPRVKVPQGSVGIGGSHTGVYPLASPGG WQIIGNTPLALFDPHASPSTLLRPGDSVRFVPQKEGVC >gi|316920349|gb|ADCU01000001.1| GENE 385 417558 - 418487 748 309 aa, chain + ## HITS:1 COG:YPO2699 KEGG:ns NR:ns ## COG: YPO2699 COG1984 # Protein_GI_number: 16122903 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Yersinia pestis # 1 307 1 307 316 427 68.0 1e-119 MLNIIRAGLQTTVQDQGRNGLRGQGVSLGGALDAPALYAANLLVGNRGTDAGLEVTLGEC TVEFTRDGWMALTGAGCDAYLDKQRIWTGWNYPVRAGQRLVLHRPKRGMRSYLAVSGGID VPKVLGSRSTDLTGGFGGLDGRRLKDGDVLPLGEVRRVPQKSQGIKQLLFNNYIRVLPGP EYQEFSPEEQAFFWRTPWHLSPQSNRMGYRLNGHALRRSSSREMFAHGLLPGVIQVPHGG QPIVLMADAQTTGGYPRIACVIEADLYHLAQIRLGEPIHFIRCTLAEAQQAYKEQKIYLR QLERGLQGD >gi|316920349|gb|ADCU01000001.1| GENE 386 418480 - 419214 546 244 aa, chain + ## HITS:1 COG:YPO2700 KEGG:ns NR:ns ## COG: YPO2700 COG1540 # Protein_GI_number: 16122904 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Yersinia pestis # 2 243 3 244 245 290 66.0 2e-78 MIDLNADLGEGCANDYALLTLVSSANIACGYHAGDDATMHQSVLWAKELGVAVGAHPSFL DRANFGRRRQTLSPDEVYQLVMEQLNALNRHCLALEVRLRHVKPHGMLYNQAAVEPQLAY AIAHAVFDFDPALRLVGLAGSEMIRAGKLLGLTTWQEVFADRNYQADGTLVPRSQPDALI TDDQQALRHTLMMVQHNQIVTPQGDRVPVQADTVCLHGDSMHALAFAQLLRQHFLQQGIE VGAG >gi|316920349|gb|ADCU01000001.1| GENE 387 419284 - 420075 701 263 aa, chain + ## HITS:1 COG:nei KEGG:ns NR:ns ## COG: nei COG0266 # Protein_GI_number: 16128689 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Escherichia coli K12 # 1 262 1 262 263 384 70.0 1e-107 MPEGPEIRRAADKLTDAVVGKPLTEVWFAFPQLKHYQPQLIGEKIEDIETRGKALLTHFS NGLTMYSHNQLYGVWKIVAAGDTPNTKRDLRVRLETEDQAILLYSASDITIAPREEIAQH PFLQRVGPDVLDLRLTAEQVKERLMLPAFRRRQFGGLLLDQRFLAGLGNYLRVEILWDAE LAPTHNAQSLRPEQLEHLSHALLEIPRLSYNTRGTMDEDVHHGALFQFKVFHRAGEPCLR CGLMIEKTMISSRPFYWCPNCQR >gi|316920349|gb|ADCU01000001.1| GENE 388 420145 - 421428 1234 427 aa, chain - ## HITS:1 COG:STM0730 KEGG:ns NR:ns ## COG: STM0730 COG0372 # Protein_GI_number: 16764100 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Salmonella typhimurium LT2 # 1 427 1 427 427 816 89.0 0 MANKKATLTLNGSETIELDVLSGTLGGEEIDIRSLGSKGYFTFDPGFTSTASCESKITYI DGDEGILLHRGFPIDELAKNSNYLEVCYILLYGEAPTPEEYETFKTTVTRHTMIHEQITR LFHGFRRDSHPMAVMCGVTASLAAFYHDSLDVNNERHREIAAYRLLSKMPTLAAMCYKYS LGQPFVYPKNNLSYSGNFLNMMFSTPCEEYVVNPVLERAMDRILILHADHEQNASTSTVR TAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVDHIPEFVRRAKDKNDSFR LMGFGHRVYKNYDPRATVMRETCHEVLKELNLQDDLLEVAMELEHIALNDPYFIEKKLYP NVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWNEMHDDGIKIARPRQLYTGYDKRP FESKLKK >gi|316920349|gb|ADCU01000001.1| GENE 389 422260 - 422649 220 129 aa, chain + ## HITS:1 COG:STM0732 KEGG:ns NR:ns ## COG: STM0732 COG2009 # Protein_GI_number: 16764102 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Salmonella typhimurium LT2 # 1 129 1 129 129 194 81.0 4e-50 MIKNVKKQRPVNLDLQTIRFPVTAIASILHRASGVITFVSIGILLWLLGLSLASPEGFAQ AAAVMDSFIVKFIVWGILTALAYHICGGIRHMLMDFGYIEESFAAGSRTAYISFAITVVL SILAGVLVW >gi|316920349|gb|ADCU01000001.1| GENE 390 422643 - 423005 304 120 aa, chain + ## HITS:1 COG:YPO1110 KEGG:ns NR:ns ## COG: YPO1110 COG2142 # Protein_GI_number: 16121410 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase, hydrophobic anchor subunit # Organism: Yersinia pestis # 8 120 3 115 115 137 79.0 4e-33 MVTPNSKSSASALGRNGVHDWLLLRAAAIVITLYVLYILGFIFTADSLTYGIWRGFFASN ITKVFTVLTLVSILAHAWIGMWQVLTDYIKPLALRLILQLVIVVALVVYLVYGTLVVWGA >gi|316920349|gb|ADCU01000001.1| GENE 391 423007 - 424788 1875 593 aa, chain + ## HITS:1 COG:ECs0748 KEGG:ns NR:ns ## COG: ECs0748 COG1053 # Protein_GI_number: 15830002 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Escherichia coli O157:H7 # 8 593 3 588 588 1105 94.0 0 MSQSVSGLEVREFDAVVIGAGGAGMRAALQISQMGLSCALLSKVFPTRSHTVSAQGGITV ALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIY QRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDG AVVGTTAICIETGEVVYFKAKATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQD MEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMI EIREGRGCDGPWGPHAKLKLDHLGKDVLEARLPGILELSRTFAHVDPVKEPIPVIPTCHY MMGGIPTKVTGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRSA GLHLQECLIEQGPSRDASESDIEASLDRMNRWNNTRSGEDPVQIRKDLQSCMQHNFSVFR EGDAMAKGLEELKVIRERLKNARLDDTSSDFNTQRVECLELDNLMETAFATAVSANFRTE SRGAHSRFDFPDRDDANWLCHSLYLPQTESMTRRSVNMEPKLRPAFPPKIRTY >gi|316920349|gb|ADCU01000001.1| GENE 392 424839 - 425555 653 238 aa, chain + ## HITS:1 COG:YPO1112 KEGG:ns NR:ns ## COG: YPO1112 COG0479 # Protein_GI_number: 16121412 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Yersinia pestis # 1 238 1 238 238 466 91.0 1e-131 MKVEFSVYRYNPDVDNAPRMQDYTLEAEEGRDMMLLDALILLKEQDPTLAFRRSCREGVC GSDGVNMNGKNGLACITPVSTLQRAGKKIVIRPLPGLPVVRDLVVDMGQFYTQYEKIKPY LLNDGKNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLASYR FLIDSRDTETDSRLDDLDDAFSVFRCHSIMNCVNVCPKGLNPTRAIGHIKSMLLHRSA >gi|316920349|gb|ADCU01000001.1| GENE 393 425883 - 428690 2551 935 aa, chain + ## HITS:1 COG:YPO1113 KEGG:ns NR:ns ## COG: YPO1113 COG0567 # Protein_GI_number: 16121413 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Yersinia pestis # 1 935 1 935 935 1773 88.0 0 MQNGAMKAWLDSSYLAGANQSYIEQLYEDYLTDPDSVDLSWKEIFQQLPTIGLKSEQFHS QTRDYFRRLAKDPSRFNISLNDPDTDAKQVKVLQMINAFRFRGHQQANLDPLGLWKQDAV PDLEPSFHNLTEEDFDQTFNVGSFAIGKETMKLSDLYQALKQTYCGSIGAEYMHITNTEE KRWIQQRLESVVGQPSFTQEEKQRFLRELTAAEGLERYLGAKFPGAKRFSLEGGDALVPM LKELIRHAGKNGTREAVLGMAHRGRLNVLINVLGKKPQDLFDEFAGKHKEHLGAGDVKYH MGFSSDVETEGGLVHLALAFNPSHLEIVSPVVMGSVRARRDRLDEARSNMVLPITIHGDA AIAGQGIVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPKDARSTQYCTDIAKMVQAP IFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPSATQPVMYQKIK KHPTPRKIYADKLTEQSVASLEDATEMVNLYRDALDRGECVVDEWRPMNMHTFTWSPYLN HEWDEVYPSTVELKRLQDLARRISRAPESVEMQSRVAKIYGDRAEMAEGNKPFDWGAAEN LAYATLVDEGVPVRISGEDCGRGTFFHRHSVIHNQKDGSVYIPLENVHNGQGDFKVWDSV LSEAAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRLCGLVMLL PHGYEGQGPEHSSARLERYLQLCADQNMQVCIPSTPAQVYHMLRRQALRGMRRPLIVMSP KSLLRHPLAVSSLEELANGSFQPVIGEIDDIDPKDVKRVVMCSGKVYYDLLEQRRKNEQK DVAIVRIEQLYPFPHQAIQDAFAPYAHVHDFVWCQEEPLNQGAWYCSQHNFREVIPFGAS LRYAGRAASASPAVGYMSVHQKQQQDLVNDALNVE >gi|316920349|gb|ADCU01000001.1| GENE 394 428765 - 429979 1507 404 aa, chain + ## HITS:1 COG:YPO1114 KEGG:ns NR:ns ## COG: YPO1114 COG0508 # Protein_GI_number: 16121414 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Yersinia pestis # 1 404 1 407 407 632 83.0 0 MSSVEILVPDLPESVADATVATWHKKPGDTVARDEVIVEIETDKVVLEVPAPEAGIMDAI LEEEGATVLSRQLLGRLRPADVSGKPTTDKAQSSESTPSSRHTAALEEGSSDAQGPAIRR LLAEHSLNAADIKGTGVGGRITREDVDKHLASAAPKAAKAAEPEVVAAPLGARTEKRVPM TRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDMRKQYGEAFEKRHGVRLGFMSFYIKA VLEALKRYPEVNASIDGEDVVYHNYFDVSIAVSTPRGLVTPVLRNVDTLGMADIEKNIKE LAVKGRDGKLKVEELTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQ VVILPMMYLALSYDHRLIDGRESVGFLVTVKEMLEDPARLLLDV >gi|316920349|gb|ADCU01000001.1| GENE 395 430177 - 431343 1298 388 aa, chain + ## HITS:1 COG:YPO1115 KEGG:ns NR:ns ## COG: YPO1115 COG0045 # Protein_GI_number: 16121415 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Yersinia pestis # 1 388 1 388 388 680 92.0 0 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGSGPWVVKCQVHAGGRGKAGGV KLVKSKEEIRAFAENWLGKRLVTYQTDALGQPVHQILVEGATDIDKELYLGAVVDRGTRR VVFMASTEGGVEIEKVADETPHLIHKTAIDPLTGPQPYQGRELAFKLGLTGKQVGQFTKI FMGLATLFLERDLALVEINPLVITKQGDLICLDGKLSADGNALFRQAELREMRDPSQEDA RESQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTE AFKIILSDEKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKK LADSGLNIIAAKSLTDAAQQVVAAVEGK >gi|316920349|gb|ADCU01000001.1| GENE 396 431343 - 432212 1060 289 aa, chain + ## HITS:1 COG:YPO1116 KEGG:ns NR:ns ## COG: YPO1116 COG0074 # Protein_GI_number: 16121416 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Yersinia pestis # 1 288 1 288 290 504 95.0 1e-143 MSILINKDTKVICQGFTGSQGTFHSEQALAYGTKLVGGVTPGKGGTEHLGLPVFNTVREA VEATGATASVIYVPAPFCKDSILEAIDAGIKLIICITEGIPTLDMLVVKAKLEQSDARMI GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDIGFGQSSCVGIGG DPIPGSNFIDILKLFQEDPQTEVIVMIGEIGGNAEEDAAAYIKDHVTKPVVGYIAGVTAP KGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLAEIGNAVKTVLR >gi|316920349|gb|ADCU01000001.1| GENE 397 433003 - 434565 1664 520 aa, chain + ## HITS:1 COG:ECs0768 KEGG:ns NR:ns ## COG: ECs0768 COG1271 # Protein_GI_number: 15830022 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Escherichia coli O157:H7 # 1 515 2 516 523 891 86.0 0 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLTGKQVYKDMTKFWGKLFG INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR LGKVQHLATTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA QVKFVHTVSAGYVTGAMFILGISSYYLLKGRDFAFAKRSFAIAAAFGLAASLSVIVLGDE SGYEMGDVQKTKLAAIEAEWETQPAPASFTLFGIPNQETMTNEYAIHIPYALGLIATRSL DQQVTGLKELMAQHQVRIRNGMKAYELLQELRTGNTDPAVRNEFNKAKQDLGYGMLLKRY TDNPSQASEEQIQAATKDSIPKVAPLYFAFRIMVACGFALLLIIALSFWTVIRGNVGKKR WLHRAALLGIPLPWIACEAGWFVAEYGRQPWAIGEVLPTAVANSSLTTGDLLFSIILICG LYTLFLVAEMYLMFKFARLGPSSLKTGRYHFEQTNAVEAR >gi|316920349|gb|ADCU01000001.1| GENE 398 434580 - 435719 1224 379 aa, chain + ## HITS:1 COG:YPO1118 KEGG:ns NR:ns ## COG: YPO1118 COG1294 # Protein_GI_number: 16121418 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Yersinia pestis # 1 379 1 379 379 627 84.0 1e-180 MFDYEVLRFVWWLLVGVLLIGFAVTDGFDMGVGVLSRIIGKTDTERRIMINAVAPHWEGN QVWLVTAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIESTRWRNMWD WGIFIGSFVPALVFGVAFGNLLLGVPFHIDEYLRLYYTGNFFQLLNPFGLLAGVVSLTML LAQGATYLQMKTTGEIHLRSRAAAQICSLVMAIAFLLAGVWLVKGIDGYVITSAIDTAAQ SNPLRKEVAHQAGAWLLNFNKYPILWALPALGVVLPLLTTLCSRVEKGGWAFLFSSLTIA CVILTAGVTMFPFVMPSITNPSMSLTMWDATSSLLTLQVMTVVAIIFVPIVLLYTIWCYY KMFGRLDKKYIEENTHTLY >gi|316920349|gb|ADCU01000001.1| GENE 399 435732 - 435845 141 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWYFAWILGTLLACFFAIITAMAIENSEAKATAKDAE >gi|316920349|gb|ADCU01000001.1| GENE 400 435845 - 436138 162 97 aa, chain + ## HITS:1 COG:YPO1119 KEGG:ns NR:ns ## COG: YPO1119 COG3790 # Protein_GI_number: 16121419 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 4 97 17 110 110 130 69.0 4e-31 MANLSDKLYQIMDKGPLRALSLVLALVVAFCVFWDPSRFAAKTSELEIWQGLLIMWAVCA GVIHGVGFRPHRSLWKAVFSPLPAVIILLAGLLHFFS >gi|316920349|gb|ADCU01000001.1| GENE 401 436294 - 436689 214 131 aa, chain + ## HITS:1 COG:YPO1120 KEGG:ns NR:ns ## COG: YPO1120 COG0824 # Protein_GI_number: 16121420 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Yersinia pestis # 2 130 5 133 133 213 82.0 8e-56 MMFRWPVRVYYEDTDAGGVVYHARYVAFYERARTEMLRQHNFSQQQLLSEHVAFAVRRMT VEYLSPARLDDMLEVETEITAIRGASLTFAQRIINSQGKILSQADVLVACIDQNQMKPIA LPKSIVAEFKQ >gi|316920349|gb|ADCU01000001.1| GENE 402 436686 - 437369 677 227 aa, chain + ## HITS:1 COG:YPO1121 KEGG:ns NR:ns ## COG: YPO1121 COG0811 # Protein_GI_number: 16121421 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Yersinia pestis # 1 227 1 228 228 390 89.0 1e-109 MTDMNMFDLFLKASLLVKLIMLVLVCFSIASWAIIIQRTRILNAATRDAEAFEDKFWSGI ELSRLYQESQTRRDSLTGSEQIFHSGFKEFARLHRVNSHAADGVIEGATRAMRISLNREV EGLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIGLGAVKQATLQMVAPGIAEALIATAI GLFAAIPAVMAYNRLNQRVNKLEQNYTNFMEEFIAILHRQAFATESK >gi|316920349|gb|ADCU01000001.1| GENE 403 437383 - 437805 492 140 aa, chain + ## HITS:1 COG:YPO1122 KEGG:ns NR:ns ## COG: YPO1122 COG0848 # Protein_GI_number: 16121422 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Yersinia pestis # 1 140 1 142 142 194 86.0 3e-50 MARSSGRRELKSEINIVPLLDVLLVLVLIFMATAPIITQSVEVDLPDATDSKTVSTNDNP PVIVEVSGIGQYAVVVDHNRMEQLPAEQVVAEAQSQLKANPKTVFLIGGAKDVPYDEIIK ALNLLHQAGVASVGLMTQPI >gi|316920349|gb|ADCU01000001.1| GENE 404 438079 - 439212 1294 377 aa, chain + ## HITS:1 COG:ECs0774 KEGG:ns NR:ns ## COG: ECs0774 COG3064 # Protein_GI_number: 15830028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane protein involved in colicin uptake # Organism: Escherichia coli O157:H7 # 3 376 35 394 394 135 50.0 2e-31 MQDSTISAGGGGGGGSAIDAVMVDSGAMVKEYNDRQQQLQSDARRAQQERKKQADKQAEE LQQKQAEEQQRLKALEKERIQAQEDAKKAAEDAKKAAEEAQKQAAEEVKKAAEDAKKEAA LAAAKVKQEAAKEAALAAAAAKKQAEEEVKKAAAEAKKQAEAEAKKQAAIDAKKAAEEAK KQAAAEAKKAAEDAKKEAAAEAKKQAAAEAKAKADTEAKAAADAKKAADAKKKADAAAAK AAEGVDDLFDGLADGKNAPKGGGAAGASGSAGKAGAAGKGNSKTSGASGADISNYAGQIQ AAIESKFHTDPSFSGKVCNLRIKLASDGMLLSVASEGGDPALCQAAVAAARMAKYPKPPS DAIYQIFKNAPVDFKPN >gi|316920349|gb|ADCU01000001.1| GENE 405 439394 - 440686 1225 430 aa, chain + ## HITS:1 COG:YPO1124 KEGG:ns NR:ns ## COG: YPO1124 COG0823 # Protein_GI_number: 16121424 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic component of the Tol biopolymer transport system # Organism: Yersinia pestis # 1 430 1 430 430 743 87.0 0 MKQAFRVAMGLLILWASVLHAEVRIVITQGVDTARPIGVVPFKWMGPGSAPEDIGGIVAA DLRNSGKFNPIDTNRMPQQPTTVAEVTPAAWTALGIDAVVVGQVQPSADGGYVVSYQMVD TSGNPGSVLSQNQYKVTKQWLRYAAHTSSDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPY ELRVADYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGKSALVIQTLSNGAIRQVA SFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMDLGSGAIRQVTDGRSNNTEPSWFPDSQ NLAFTSDQGGRPQIYKVNINGGAPERLTWEGSQNQDGDVSSDGKFLVMVGTSGGSQHITK LDLGSNANQVLTSTFLDETPSIAPNGTMVIYSSTQGLGSVLQLVSTDGRFKARLPATDGQ VKFPAWSPYL >gi|316920349|gb|ADCU01000001.1| GENE 406 440735 - 441250 542 171 aa, chain + ## HITS:1 COG:YPO1125 KEGG:ns NR:ns ## COG: YPO1125 COG2885 # Protein_GI_number: 16121425 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Yersinia pestis # 1 171 1 168 168 269 87.0 2e-72 MQLNKVLKGLMLALPIMAVAACSSHKNANDDQSAMGANAGNGMENGSSNLSSEEQARLQM QELQKNNIVYFGLDKYDVSSDYAQMLDAHAAFLRNNPSYKVTVEGHADERGTPEYNIALG ERRANAVKMYLQGKGVGADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLVY >gi|316920349|gb|ADCU01000001.1| GENE 407 441273 - 442076 505 267 aa, chain + ## HITS:1 COG:YPO1126 KEGG:ns NR:ns ## COG: YPO1126 COG1729 # Protein_GI_number: 16121426 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 267 1 269 269 289 71.0 4e-78 MSSNFRLHLLSLSLLVGIAAPWAAIAQAPISSVGSGSVEDRVTSLERITNAQGQLFSQLQ QQLSDNQRDIDTLRGQIQESQYQLNQVVERQKQILLQLDSQGSASTGATSAPVASTSTGS DSSAAAAPAAATASTAAETPASSGDANTDYNRAVDLVLVKKQNDQAITAFQSFVKQYPDS TYQPNANYWLGQLFYNKGKKDDSAYYFAVVVKNYPKSPKAPEAMYKVGVIMQEKGQVDKA KAVYQQVIKQYPTSDSAKQAQKRIAAL >gi|316920349|gb|ADCU01000001.1| GENE 408 443006 - 444058 643 350 aa, chain + ## HITS:1 COG:YPO1127 KEGG:ns NR:ns ## COG: YPO1127 COG0379 # Protein_GI_number: 16121427 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Yersinia pestis # 1 350 4 353 353 612 83.0 1e-175 MFDPNAAVYPFPPKPAPLVPDEKRFYREKIKTLLKQHNAVLVAHYYTDPEIQALAEETGG CVSDSLEMARFGRDHPATTLLVAGVRFMGETAKILSPEKRVLMPTLQAECSLDLGCPVDE FSAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAVELIEHLDGLGEKIIWAPDRHLGR YVQRQTGADILCWQGACIVHDEFKTQALEQMKRLYPEAAILVHPESPQSIVDMADAVGST SQLIQAAQRLPNPQMIVATDRGIFYKMQQACPDKVLLEAPTAGEGATCRTCAHCPWMAMN GLHALAMGLEQGGSNHEIHIDAALRERALIPLNRMLQFASDLKLNIKGNA >gi|316920349|gb|ADCU01000001.1| GENE 409 444084 - 444812 676 242 aa, chain + ## HITS:1 COG:YPO1128 KEGG:ns NR:ns ## COG: YPO1128 COG3201 # Protein_GI_number: 16121428 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Yersinia pestis # 1 238 1 238 241 332 76.0 5e-91 MDFLSTSNIMIHIPLGQGGYDLSWIEAVGTLFGLLCIWYASQEKIINYAFGLINVSLFAV IFFQIQLYASLLLQIFFFAANIYGWYAWSRQTSDNQAELKIRWLSRPTAAIWTTISIVCL LFMTYNIDVVFAFLTKISVSLMQALGLNVVLPELQPDAFPFWDSAMMVLSIVAMVLMTRK YVENWILWVIIDVISVVIFALQGVYVMALEYVLLTAIALNGAWLWIKSARENGSQPLSVA AE >gi|316920349|gb|ADCU01000001.1| GENE 410 445156 - 446556 907 466 aa, chain + ## HITS:1 COG:ECs3955 KEGG:ns NR:ns ## COG: ECs3955 COG4992 # Protein_GI_number: 15833209 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli O157:H7 # 18 453 55 490 496 732 79.0 0 MSRTNVVLNPLECTQQALNWIEKKSLTHDEMVALNKEVLSNFKEYVNPGFLEYRKSVTAG GDYGAVEWQASGLNTLVDTQGNEYIDCLGGFGIFNVGHRNPKVISAVESQMAKQPLHSQE LLDPLRSMLAKTLAAITPGDLKYTFFCNSGTESVEAALKLAKAYQSPHGKYTFVAATGAF HGKSLGALSATAKSIFRRPFMPLLPGFHHVPFGDIEALRTQLHECKKTGDDVAAVLLEPI QGEGGVILPPKGYLPAVRALCDEYGALLIFDEVQTGMGRTGKMFACEHENVTPDILCLAK ALGGGVMPIGATVATEKVFSVLFDNPFLHTTTFGGNPLSCAAALATFNVILTENLPAKAT ERGQQLMDGFRRLAVQYPEFMMEVRGQGLMQAIEFVKSEVGYSFSREMFQRNVLVAGTLN NSKSIRIEPPLTITAEQCKQVLTRAEEALKAMRALSPTHQPTMSVA >gi|316920349|gb|ADCU01000001.1| GENE 411 446645 - 447607 613 320 aa, chain - ## HITS:1 COG:YPO1129 KEGG:ns NR:ns ## COG: YPO1129 COG1230 # Protein_GI_number: 16121429 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Yersinia pestis # 10 298 8 296 312 392 67.0 1e-109 MSGHQHSHSTQGSDSKRLILALAVTAIFMVVEVIGGLISGSLALLADAGHMLTDTAALFV AVMAVRFATRSPTLRHSFGFLRFTTLAAFINAAALVVIVFIIVWEAVKRFMSPEPVMGGT MLVIAIAGLLANILSFWLLHHGSEEKNINVRAAALHVMGDLLGSVGAIVAALVIMWTGWT PIDPILSVVVSCLVLHSAWGLLKESTNELLEGTPEDVDVPQLQRDLCHEFPEVRNVHHVH IWQIGEQRLMTLHVRVIPPHDHDGLLDQIQHYLAEQYQIGHATIQMEFNGCEEHDCDLMT HVKMPSGHNHSHGHTHEHNG >gi|316920349|gb|ADCU01000001.1| GENE 412 447719 - 448315 44 198 aa, chain - ## HITS:1 COG:YPO0983 KEGG:ns NR:ns ## COG: YPO0983 COG1266 # Protein_GI_number: 16121287 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Yersinia pestis # 3 196 21 213 216 127 38.0 1e-29 MLWYFISYVALFLNNYKELYQSGYLISFMSFALWLPLSYIAIRKYSTHYNDIKIGGIDTQ STLFFITFILILRVISAFYDKPEAWIESITTYSNLSFFLFSICVCFLAPIYEEIVFRGFL LNAFLLWGPKAKICGIVLTSILFSLMHTQYSSPTTFIELFTFSVILCYARIYKNGLLLPM LLHFIFNSFATLLFILNR >gi|316920349|gb|ADCU01000001.1| GENE 413 448500 - 448679 135 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGVLRVFAQLIVRNRMKLFYAEKIFMSDTNFVVGRAFTQAVQYPLMLINVFKIIINGGS >gi|316920349|gb|ADCU01000001.1| GENE 414 448820 - 449872 892 350 aa, chain + ## HITS:1 COG:ECs0782 KEGG:ns NR:ns ## COG: ECs0782 COG0722 # Protein_GI_number: 15830036 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli O157:H7 # 1 350 1 350 350 624 85.0 1e-179 MNYQNDDLRIKEIKELLPPVALLEKFPATVFAAETVSQSRGAIHQILKGKDDRLLVIIGP CSIHDVEAAKEYAQRLLSLRQELNGELEIVMRVYFEKPRTTVGWKGLINDPHMDSSYQIN DGLRIARKLLLDINDIGLPTAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLS CPVGFKNGTDGTIKVAIDAINAASAAHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPN YSAAHVQEVKAGLKKAGLAEQIMIDFSHANSSKQFKKQLEVCTDVCDQIKAGDKAIMGVM IESHLEEGNQNLEGSEPLVYGKSVTDACIGWNDTETVLRQLAQAVKVRRG >gi|316920349|gb|ADCU01000001.1| GENE 415 449939 - 450361 430 140 aa, chain - ## HITS:1 COG:STM0307 KEGG:ns NR:ns ## COG: STM0307 COG3678 # Protein_GI_number: 16763690 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Salmonella typhimurium LT2 # 1 137 1 135 135 109 43.0 1e-24 MNKFSKTAIAVSALVFSSLALASSNTGGNSQPEAQQDPMIQHLHLTPSQVEKIKTLRAET DQKMASIDTKDIQNGLLINIIDSGKWDEAAVKKQITAFGKAQEQARYYRMQYFFNLSKIL TPEQKAQVKSDLAQEMEQQQ >gi|316920349|gb|ADCU01000001.1| GENE 416 450608 - 451360 771 250 aa, chain - ## HITS:1 COG:STM0772 KEGG:ns NR:ns ## COG: STM0772 COG0588 # Protein_GI_number: 16764136 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Salmonella typhimurium LT2 # 1 250 1 250 250 430 89.0 1e-120 MAVTKLVLVRHGESEWNKENRFTGWTDVELSDKGRAEAKSAGKLLKEQGFSFDFAYTSVL KRAIHTLWNVLDELEQQWLPVEKSWKLNERHYGALQGLNKAETAQKYGDEQVKLWRRGFA VTPPELTKEDERYPGHDPRYAKLSEQELPVTESLATTIDRVIPYWTDVIKPRIASGERVI IAAHGNSLRALVKYLDNLSEDEILELNIPTGVPLVYEFDENLKPLKRYYLGDAAEIAAKA AAVANQGKAK >gi|316920349|gb|ADCU01000001.1| GENE 417 451568 - 451921 297 117 aa, chain - ## HITS:1 COG:no KEGG:YPTB1167 NR:ns ## KEGG: YPTB1167 # Name: psiF # Def: putative starvation-inducible protein # Organism: Y.pseudotuberculosis # Pathway: not_defined # 33 116 26 109 111 79 70.0 4e-14 MFMRKVLPLMAGLLLAGSALAADPASTESKAVKAPSAKQLAQQKKMTDCSQQASSQSLSG DARKNFMSTCLKAETNPTSTTLTPQQQKMKTCNAEAKTKTFKEGERQTFMSDCLKKK >gi|316920349|gb|ADCU01000001.1| GENE 418 452165 - 455305 2755 1046 aa, chain - ## HITS:1 COG:RSp0928 KEGG:ns NR:ns ## COG: RSp0928 COG3696 # Protein_GI_number: 17549149 # Func_class: P Inorganic ion transport and metabolism # Function: Putative silver efflux pump # Organism: Ralstonia solanacearum # 1 1045 1 1045 1047 1423 69.0 0 MIASVIRWSLKNRLLVLLAAIGLAVWGLWAVQKAPLDALPDLSDTQVIIRVSYPGKAPQV VENLVTYPLTTTMLSVPGAKTVRGFSMFGDSYVYVLFDDGTDPYWARSRVLEYLSQAQST LPPEAKASLGPDATGVGWVYEYALTDTTGKYSLADLRALQDWTLKYELKTVPNVSEVASV GGMVRQYQVVLQPEKMRALNVTHDQISTAIKSANQEGGGSVLELGEAEYMVRTSGYLQSL DDFRNVVIANRNGVPVMLSDVATLRLGPEMRRGVAELNGEGEVAGGIIVMRSGKNALETI NAVKDKLQELQKSLPPGVKIVTTYDRSQLIERAIDTLSHKLLEEFIVVAVICALFLFHFR SALVAIISLPLGILGAFVIMHYQGVNANIMSLGGIAIAIGAMVDAAIVMIENMHKVLEQW RHENENRTPSNAEYWKIAEKAAVEVGPALFCSLLIITLSFIPVFALEAQEGKMFSPLAFT KTYAMAVSAGLGITLVPVLMGYFIRGKIPDENANPINRWLIKAYHPLLDWVLARPKTTLV IAAALLLATAYPLSRLGSEFMPSLDEGDLLYMPSALPGISAREASRLLQLTDRLIKTVPE VESVFGKAGRAESATDPAPLTMLETTILFKPREQWREGMTMDTLIAELDARVQVPGIANV WVPPIRNRLDMLSTGIKSPVGIKVNGNNLQQIGDVAEQIERVVQKVPGVTSALAERMTGG RYIDIDINRIAAARYGVTVKELQSLVSSVIGGENIGETIEGRERFPINIRYPREIRDSVE KLRALPVVTASGAQVALGDLAQVRISEGPPMLKSENARLSDWVYVDLRGRDLKSAVEEMQ SVVAEQVKLPEGVSLSWSGQFEYMERASAKLQMVLPLTLMIIFVLLYITFGKIRDALLIM CTLPFALIGGVWLLYLLGYNLSVAGAVGFIALAGVSAEFGVIMLLYLNHAVEKHQQGDQP LTHQQMLAALHEGAVLRVRPKVMTVATIMAGLLPIMWGGGTGSEVMQRIAAPMIGGMVSA PLLSMLVIPAVYLLLHPAKAQQPPRD >gi|316920349|gb|ADCU01000001.1| GENE 419 455302 - 456819 1155 505 aa, chain - ## HITS:1 COG:RSp0927 KEGG:ns NR:ns ## COG: RSp0927 COG0845 # Protein_GI_number: 17549148 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Ralstonia solanacearum # 4 494 3 506 513 315 37.0 2e-85 MKNKFTLSAIVAALIIAGWGGYTLGSQSRNSHGVEPTKQASDDGRKVLYWYDPMVPGQRF DKPGKSPFMDMELVPRYANESGPESDNGVSISARQQQNLGIKTAVAERHTFSSNLKAYGT VAVNERTLSTLSAPSAGVIEQLKVRALQQSVKAGETLAVIWNPSWSSAQQEYLAIRAMGD NALTQAARQRLALQFMPESVIRAVERSGKVQPRMTIAAPRSGYVSKLEVREGQQVATAQP LFELASLDPVWVVIDYPQSQADRLRLGDSVTATSSAWPGVSFSGRVSELLPELDATTRNL KARIELSNPKQQLKPGMYLNVASVSSHERSALAVPQSALMTSGENTHLLLSDGNGHFTPV AVRTGESQGEWVEIKDGITDGQSVVTSGQFMLDSEASLRNALPQFSDDKPATDTASAEIS QTAQYTTTGVIKAMDGENVTISHEAIPALKWGPMTMDFTLPGGKLPEGVQLGSHINFSFS MDENGIVIRHIMPAEMKMDMSGGQS >gi|316920349|gb|ADCU01000001.1| GENE 420 456816 - 458072 1318 418 aa, chain - ## HITS:1 COG:no KEGG:Pecwa_3073 NR:ns ## KEGG: Pecwa_3073 # Name: not_defined # Def: outer membrane efflux protein # Organism: P.wasabiae # Pathway: not_defined # 1 415 1 415 419 437 64.0 1e-121 MQNRKQRRIAAWLAAMFFLPAASQAANLSLDEALNAAQKYSAALSANQHQVNALENMADS ATQLPDPKLKFGIENVPVGGDNGRRLTREGMTMQRVGIMQDYVSSEKRERKADTLRAEAA KTAANSLAIRAQLQRDTAQAWLDLALAQRSEEQAKKLVSEGQRQLPLQNASVANGSAPSS AIDAKLTLAAMQDRVTDASRDVQVAQARLMQLTGESDVRTAGSLPRYQRLPADRDVLIQA IDRHPEVLQAKRESDVAHARSEQTALAAVPDVGVEVYYAKRGDDYEDMAGVMFTVDLPLF KSKRQDKDYAADVSRSMEANDQLTLIQRDHRAQLDTLIAQYQAAQNRWQRQQQEVVPLQQ QKIRLLEAQYRAGSSSLAEVMSGRRDLLESELASVAAEREMAKIWASIRYLIPQGAAL >gi|316920349|gb|ADCU01000001.1| GENE 421 458085 - 458456 324 123 aa, chain - ## HITS:1 COG:no KEGG:Dd703_1168 NR:ns ## KEGG: Dd703_1168 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii # Pathway: not_defined # 10 123 1 123 124 85 45.0 7e-16 MSYIINIRALYVTTAVLSALTLSTPLLANTQHHDMSNMHDSMQHHDTNTTVYHSSGTVKS WSQENGVSLTHAPIPALHWPAMTMTFSLPSTSAIKPVAPDSKVNFSFIQTESGYQLTEIH PVQ >gi|316920349|gb|ADCU01000001.1| GENE 422 458545 - 458970 280 141 aa, chain - ## HITS:1 COG:no KEGG:ECA1387 NR:ns ## KEGG: ECA1387 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 1 141 1 150 150 114 46.0 1e-24 MSISSKLQQRMHNLRVRNVWATVLVACWALLNAQLAIAGHQCNMNVDGPAPMIQHVTHMQ GAPAVVAHHMQVSETMCEKHCSPDSMKQDHAEAQLTLHAIPVSTEIAAIDLAAVELPADV EWRQPPSIGPPAEIRFCRFRE >gi|316920349|gb|ADCU01000001.1| GENE 423 459554 - 460609 863 351 aa, chain - ## HITS:1 COG:STM0773 KEGG:ns NR:ns ## COG: STM0773 COG2017 # Protein_GI_number: 16764137 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 348 1 344 346 412 57.0 1e-115 MLNFSESSRGPDGEPFQFTTLTNKSGSVATFMDWGATWVSCQIALNDGSMREVLLGCQTP EQFTQQSAFFGATVGRYANRIAKAQYVYQDEKIVLQPSQGENLLHGGPEGFDKRRWERVS HDTHHVTYRLESADGDQGFPGHLAVQTTYRLTEDNRIEISWQATVDKTCPVNLTNHAYFN LDGDGSTTDALAQKLQLFADKYLPVESDGIPCGDLTDVTGSGMDFRQAKTLQQDLLKDRC QQRVKGYDHAYLLHDTCHKGSHPAAILTAADGKIEMQVFTDAPALQLYSGNFLAGTPDRR GAQYAAYAGVALESEFLPDTPNHPEWPQPDCFIKPGEEYQAATTYWFVVKG >gi|316920349|gb|ADCU01000001.1| GENE 424 460603 - 461760 917 385 aa, chain - ## HITS:1 COG:YPO1137 KEGG:ns NR:ns ## COG: YPO1137 COG0153 # Protein_GI_number: 16121434 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Yersinia pestis # 1 385 1 383 383 568 74.0 1e-162 MSLQQLASVTQDIFTRYFGYAPAMTVQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCA KRDDRTVRVIAADYDNEQDEFSLDAPFESHPTKMWSNYVRGVVKYLQIRNPNFGGADLVI SGNVPQGAGLSSSASLEVAVGQAFQALYDLPLDGVQLALNGQEAENKFVGCNCGIMDQLI SALGEEKHALLIDCRSLETHSVPMPKDVAVVIINSNVKRGLVDSEYNTRRQQCEAAAKYF NVKALRDVTQAEFEAKQAGLAPLVARRARHVITENDRTEAAAKALAAGDLKLMGTLMAES HASMRDDFEITVKPIDKLVDIVKDVIGERGGVRMTGGGFGGCIVALMPLDLVDEVRATVE REYQVQSGIKETFYVCYPSQGASVC >gi|316920349|gb|ADCU01000001.1| GENE 425 461771 - 462820 918 349 aa, chain - ## HITS:1 COG:STM0775 KEGG:ns NR:ns ## COG: STM0775 COG1085 # Protein_GI_number: 16764139 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Salmonella typhimurium LT2 # 1 346 1 346 348 622 86.0 1e-178 MTTFNPVDHPHRRYNPLTDQWVLVSPHRAKRPWQGAQETPSNQQLPQHDPDCFLCAGNTR VTGDKNPNYTGTYVFTNDFAALMPDTPDAPQNEDPLMRCESARGTSRVICFSPDHSKTLP ELSLPALEEIVKTWQQQSADLGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAA REDRLQQAYFAEHHSPMLLDYAKREMADGSRTVVETQHWIAVVPYWAAWPFETLLLPKTH LLRMTDINEEQRADLAVALKKLTSRYDNLFQCSFPYSMGWHGAPFHEIDCVHWQLHAHFY PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDVHYREANAK >gi|316920349|gb|ADCU01000001.1| GENE 426 462843 - 463859 858 338 aa, chain - ## HITS:1 COG:YPO1139 KEGG:ns NR:ns ## COG: YPO1139 COG1087 # Protein_GI_number: 16121436 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Yersinia pestis # 1 338 1 338 338 572 79.0 1e-163 MIVLVTGGSGYIGSHTCVQLIAAGHTPIILDNLCNSKASVLERINTLTGKTPALYQGDIR DRALLDRIFAENRVDSVIHFAGLKAVGESVQKPLEYYDNNVSGTLVLLEAMRAANVKNMI FSSSATVYGDQPKIPYVEDFPTGNPSSPYGRSKLMVEQILEDLHRADPEWSVSLLRYFNP VGAHPSGLMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVVDLA DGHLAALNVMTNKPGVHIYNLGAGVGYSVLQVVNAFSKACGKPVNYHFAPRRAGDLAAYW ADSTRADKDLDWRVTRTLDDMAQDTWRWQSQNPQGYPE >gi|316920349|gb|ADCU01000001.1| GENE 427 464133 - 464948 706 271 aa, chain - ## HITS:1 COG:YPO1140 KEGG:ns NR:ns ## COG: YPO1140 COG1266 # Protein_GI_number: 16121437 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Yersinia pestis # 1 269 1 269 272 236 59.0 2e-62 MWGALAASLAVLSFQRQLSAFLLLSATALAFSQGILNFNALGFMAVVALAGVARYRWENQ QKGGFNSEVLLVLAAVVLFLHLVPGFNNPKILDKVIAGPHSAPFSMYYNFDKALVPFILL LALPTLFRTSSTASRPYWNWLLLGISVPALLLIAVALGGLRIELHQPSWIWQFALANLFF VSLAEEALFRGYLQQRLSGWLGHLPALLITAVIFGLAHYAGGWLMVVFAGLAGVIYGIAW MWSGRLWVATLFHFGLNLIHLLFFTYPMYHA >gi|316920349|gb|ADCU01000001.1| GENE 428 465056 - 466522 1116 488 aa, chain - ## HITS:1 COG:YPO1142 KEGG:ns NR:ns ## COG: YPO1142 COG1119 # Protein_GI_number: 16121438 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA # Organism: Yersinia pestis # 1 487 1 488 496 723 72.0 0 MTSLTFAQARFRLSDTRTLFLPSLIIHSGESWAFVGANGSGKSALARALTQELPLLNGQT ESQFVHSIRLSFEQLQKLLSDEWQRNNTDMLSEGEDDTGRTVAEIIQSDIKNAQRCEQLA AQFGIESLLARRFKYLSTGETRKALLCQTLMSQPDLLVLDEPFDGLDINSRAQLAQMLQE LNAQGVTTVLVLNRFDDIPDFIQHVGVLAECELTQVGSRTEVLSQALVAQLAHSEKLDGM QLPETEDPTRQDRLPNDQPRIILKDGVVQYNDLPILNHLDWQVDPDQHWQIVGPNGAGKS TLLSLITGDHPQGYSNELTLFGRRRGSGETIWDIKKHIGYVSSNLHLEYRVSISLRNVIL SGFLDSIGIYQATSDRQEKLTDQWLELLGMRTLSHHPFHDLSWGQQRLALIARALVKHPA LLILDEPLQGLDPLNRQLVKRWIDILMKDGNSQLLFVSHHPEDAPDCITHRLTFVPAGDT YHYQTDRI >gi|316920349|gb|ADCU01000001.1| GENE 429 466676 - 467467 878 263 aa, chain - ## HITS:1 COG:YPO1143 KEGG:ns NR:ns ## COG: YPO1143 COG2005 # Protein_GI_number: 16121439 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Yersinia pestis # 1 262 1 262 263 342 75.0 4e-94 MQAEILLTLKLQQRLFADPRRIELLKQVRHTGSISQGAKLAGISYKSAWDAVNEMNQLSE ETLVERATGGKGGGGAKITRYGERLIALYDLLGQIQQKAFDVLNKDDLPLDSLLAAIARF SLQTSARNQFFGTVTERDHQQVQQHLSVQLADGKTVLRAAITEQSAERLALAPGKEVLVL IKAPWVKLTTDESLAGAADNNLTGKVSHIQLGSENSEVLVQLDGGVTLCSTVDNQNMAHL KLSLGKTVTAQFNADQVILATLA >gi|316920349|gb|ADCU01000001.1| GENE 430 467674 - 467823 145 49 aa, chain + ## HITS:1 COG:no KEGG:ROD_07581 NR:ns ## KEGG: ROD_07581 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 49 35 83 83 72 77.0 6e-12 MLELLKSLVFAAIMVPVVMAAILGLIYGLGEVFNIISSIGHSEEKRSNH >gi|316920349|gb|ADCU01000001.1| GENE 431 468029 - 468796 897 255 aa, chain + ## HITS:1 COG:YPO1145 KEGG:ns NR:ns ## COG: YPO1145 COG0725 # Protein_GI_number: 16121441 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Yersinia pestis # 10 255 14 259 259 352 76.0 4e-97 MKAWNKLAVGTLLAVGVSQFAVAQEKVTVFAAASLTNALQDIAAQYEKGKDVKIVSSFAS SSTLARQIDQGAPADLFISADQQWMDFAIDKKAMVADTRITLLGNELVLVASKDSKIDKV NIDKKTDWKALLNGGRLAVGDPDHVPAGIYAKEALQKLGAWDELSPQMARANDVRAALAL VERDEAPLGIVYGSDAVASKKVKVVGIFPADSHKPVEYPMAIVKDKQTPAVTAFYDYLRT PEAAAIFTRYGFTPR >gi|316920349|gb|ADCU01000001.1| GENE 432 468796 - 469485 580 229 aa, chain + ## HITS:1 COG:YPO1146 KEGG:ns NR:ns ## COG: YPO1146 COG4149 # Protein_GI_number: 16121442 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Yersinia pestis # 1 229 1 229 231 324 82.0 7e-89 MFLSAYEWEAVVLSLQVAGTAVIFSLPVGIFTAWVLVRCNFPGKSLLDSIIHLPLVLPPV VIGYLLLVGMGRKGVIGAWLYDWFGFSFSFSWHGAALASAVVAFPLMVRAIRLALSAVDS KLEQAARTLGANPWRVFFTITLPLSFPGILAGTVLAFARSLGEFGATITFVSNIPGETRT IPLAMYTLIETPGAEADAARLCAIAIVLSLVSLLLSEWLARWSQKRLGG >gi|316920349|gb|ADCU01000001.1| GENE 433 469491 - 470549 853 352 aa, chain + ## HITS:1 COG:YPO1147 KEGG:ns NR:ns ## COG: YPO1147 COG4148 # Protein_GI_number: 16121443 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, ATPase component # Organism: Yersinia pestis # 1 352 1 352 359 534 76.0 1e-151 MLELDIHQRLGDLNLDVKATLPSKGITAIFGLSGAGKTSLINVIGGLTRPQKGSVILNGR ALVDCQRRICLPPEKRRIGYVFQDARLFPHYRVRGNLEYGMADSMRSQFDSIVRLLGIEA LLDRFPFSLSGGEKQRVAIGRALLTAPEVMLMDEPLASLDLPRKRELLPYLERLAQDVNI PILYVSHSMDEILQLADHVLLLDQGKVRAFGLLEDVWASSALRPWLQKEEQSSVLNVSVL KHHESYAMTALSVGSQHIWVGKLDVQPQTHLRIRINAADVSLVPEPPVASSIRNILAATV LECLDVDGQVEVKLSVGNAILWARITPWARDDLNIHAGQQLYAQIKSVSISR >gi|316920349|gb|ADCU01000001.1| GENE 434 471143 - 471961 877 272 aa, chain - ## HITS:1 COG:YPO1148 KEGG:ns NR:ns ## COG: YPO1148 COG0561 # Protein_GI_number: 16121444 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Yersinia pestis # 1 272 1 272 273 374 66.0 1e-103 MSYRMIALDLDGTLLTSRKQILPESLAALDLARKAGLEVMIVTGRHHIAIHPFYQALKLT TPAICCNGTYLYDYQARSVLASNPLAPAQAHQVLDRLDQMNIHGLMYVDDAMLYQQTSGH VIRSHAWAESLPENQRPTLIQVDSLQQAANDVKSIWKFATSDTDIAKLRAFADGVEADLG LTCEWSWHDQVDVAQSGNSKGNRLAEYVASRGIDMSEVIAFGDNFNDISMLENVGLGVAM GNSADEVKARAKAVIGGNEETSIADFLKQNVL >gi|316920349|gb|ADCU01000001.1| GENE 435 472071 - 475328 2229 1085 aa, chain - ## HITS:1 COG:PA0799 KEGG:ns NR:ns ## COG: PA0799 COG0553 # Protein_GI_number: 15595996 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Pseudomonas aeruginosa # 432 1085 1 660 663 638 53.0 0 MPSVSYDRTQVAQWLGHATLAKARDYSRAVSQLHWQGNMLTAKVQGTERRPYAVAIYFHN KQNQLRIEGECSCPVGFNCKHVAAVLLAGLEEQETTSTGARPELLRWLEAFRAQQITPAS AKKPTQTLAYVLAWSEHRQHHEIRLFKAKLDKDGSIRSIDQQWNNIEPALSKPPKFVTPE DFQILRELWLERPRNGIAAFELQGNSGSELIRKMMATGRFFVSDSNEPLYLGEPRSGDIQ WQRLPDNRLRPVLQTQPQASVVLPTTPPWYIDTQSGEAGVAELAKPFPQLDEFLSMPPIS LGEAPLVAAVLGEIAPELPQPPTVTSSDLRVIDVEPVPVLKLDTQNVYMGGFGNYGYRNW PLDFATFSFDYEGISVDPKHDTTLFPSDDGSVIQIQRRIEIEKRRAKELKNCGLEPIILS DKTRPPTLPADIYGLPSPESWPLFVSHTLPTLENKGWRIVMTRDSSFNVIDINDISGSVQ SSEEGWFDVEMGILVGERTVRLEPLLADLFRRDRRWLDGELENIADDEGIILSTEQGERL RIAANRLKPVVRVLVDLFAQLGNGTGTLKVSALDAGRLAALSDTGRWQFHGDTSIQELAQ RLQDGPGLQLVPIPLGLQATLRSYQHQGLSWMQFLRQHDISGVLADDMGLGKTVQTLAHI LAEKEAGRLDRPALIVVPTTLVHNWREEAARFTPDLNVLVLNGPQRKEHFDQIDQFDLIL TTYSLLWRDQKVLTQHDYHLLILDEAQYVKNATTRAATALRDLNARHRLCLTGTPLENHL GEIWSLFDFLLPGFLGSQKEFNQRWRVPIERDGDNVRRDLLVRRIRPFMLRRRKDDVATE LPPKTTLLRTVELKGSQRDLYETVRTAMQEKVRTAIDSQGMARSHIIVLDALLKLRQVCC DPRLVNLEKAALVKESAKLELLLELLPEMIEEGRRILLFSQFTGMLDLISQALDKAGIAY VTLTGSTADRHAPVQRFQRGEVPLFLISLKAGGVGLNLTAADTVIHYDPWWNPAAENQAT DRAHRMGQDKPVFVYKLIAAGSIEEKIVALQDKKAALANSILSEDSSGTTKFSADDLSAL FEPMP >gi|316920349|gb|ADCU01000001.1| GENE 436 475515 - 477278 1459 587 aa, chain - ## HITS:1 COG:RSp0274 KEGG:ns NR:ns ## COG: RSp0274 COG0405 # Protein_GI_number: 17548495 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Ralstonia solanacearum # 3 587 8 578 578 629 55.0 1e-180 MNKWPMALALSALSLALFQGAYAASMPAVEAKNGMVVSSQHLASQVGVDILKMGGNAIDA AVAVGYAQAVVNPCCGNIGGGGFMTIHLANGENTFINFRETAPAAASANMYLDEKGAVKK GASLYGYLASGVPGTVLGLDTAQRKYGKLTRQQVMAPAIKLAREGFILNRGDTDILDTTI AKFRDDPEAARIFLRKDGEPFQPGDRLIQTDLANTLEAIAQNGPDAFYHGKIPQAVETAA KKGGGILTAQDFANYRIAETAPITCSYRGYEFVSAPPPSSGGVTLCEILNVLEGYDLKTS GFNSAQTIHTMTEAMRHAYMDRNTFLGDPAFVKNPTEKLLSKEYAVEIRKQIQPETATPS SKVQPGMEPHEKPETTHYSIVDHNGNAVSTTYTINGRFGSVVIAPGTGFFLNDEMDDFTV KVGEQNMYGLVQGATNAIAPGKRPLSSMTPTLVTKDGKVFMVVGSPGGSRIITITLQTVL NVIDHGMAPQEAVDAPRIHHQWLPDEVYFEQRGLSPDTQKLLQERGYKLVEQTPWGAAEL IMVGLPGATGVSSESSGNDSAVSGKVREGFIYGANDVRRPSGSAVGY >gi|316920349|gb|ADCU01000001.1| GENE 437 477507 - 478796 840 429 aa, chain - ## HITS:1 COG:STM0793 KEGG:ns NR:ns ## COG: STM0793 COG0161 # Protein_GI_number: 16764156 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Salmonella typhimurium LT2 # 1 427 1 427 429 662 73.0 0 MTPADIEFDRRHIWHPYTSMTHPLPCYPVTSAQGCELHLDDGRQLVDGMSSWWAAIHGYN HPTLNQAVTQQLSAMSHVMFGGITHPSAVTLCQRLVDMTPEALECVFLADSGSVAVEVAM KMALQYWHARGEKRQRFLTLSHGYHGDTFGAMSVCDPQNSMHSLYQGYLPEHLFAPAPQC AFDEEWKEIDFVPFARLLAAHHQEIAAVILEPIVQGAGGMRFYHPRYLKLVRAACERHGV LLIADEIATGFGRTGELFACDHAGITPDILCLGKAITGGYMTLSAAITTRNVAETISNGE AGCFMHGPTFMGNPLACATAVASMDILASGEWRSQVNAIEQQLKQQLLPLTEHPQVKQAR VLGAIGVIETHKSVNMANLQRYFVEQGVWVRPFGKLIYLMPPYIISPQQLSQLTRAVAGA LDINAHFLD >gi|316920349|gb|ADCU01000001.1| GENE 438 478903 - 479940 1098 345 aa, chain + ## HITS:1 COG:YPO1151 KEGG:ns NR:ns ## COG: YPO1151 COG0502 # Protein_GI_number: 16121447 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Yersinia pestis # 1 345 1 345 345 612 86.0 1e-175 MAGRQHWTLEQAQALFAKPFLELMFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYC PQSSRYKTGLESEKLMEVQQVLDSARQAKAAGSTRFCMGAAWKNPHDRDMPYLEQMVQGV KEMGMETCMTLGTLSDQQANRLADAGLDYYNHNLDTSPEFYGSIITTRSYQERLDTLEKV REAGIKVCSGGIVGLGETVRDRAGLLTQLANLPKAPESVPINMLVKVQGTPLADNDDVDA FDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPGEDK DVQLFRKLGLNPQLTETEHGDNQQQQHLTEQLLHADTEQFYNAAL >gi|316920349|gb|ADCU01000001.1| GENE 439 479940 - 481097 576 385 aa, chain + ## HITS:1 COG:YPO1152 KEGG:ns NR:ns ## COG: YPO1152 COG0156 # Protein_GI_number: 16121448 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Yersinia pestis # 2 381 1 380 383 424 65.0 1e-118 MMSFQQRIDQRLSERRSAGAYRSRTISENGSGREISVNGRQYLNFSSNDYLGLSRDTAVI RAWQEGADRYGIGSAGSGHVTGFTSAHAQLEQELAEWLGYPRALMFISGYAANQAVIAAL MQKGDFIFADKLSHASLMEASMQSDATLRRFQHNQPDSLEKLLSKSDGGQALVVTEGVFS MDGDSAPLSALVEKSRQSGAWLMVDDAHGVGVCGEQGRGTSDQQRIKPDLLVVTFGKAFG LSGAAVLCSESVAEYFIQFARHLIYSTSMPPAQACALRVALQQVRKGDDLREQLKHNVQL FRRGLADTRLQLMASDSAIQPVIIGENQAALDLAQNLRDQGIWASAIRPPTVPPGTARLR ITLSAAHQEQDIQRLLEGFYAAINA >gi|316920349|gb|ADCU01000001.1| GENE 440 481078 - 481845 484 255 aa, chain + ## HITS:1 COG:YPO1153 KEGG:ns NR:ns ## COG: YPO1153 COG0500 # Protein_GI_number: 16121449 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Yersinia pestis # 6 255 18 267 267 267 56.0 1e-71 MQPSTLSVNKSAIAASFSRAANSYDIVAAFQRLCGEKLLARVSNYEGLKVLDAGCGTGFF SRRFRHAGAQVIALDLAAGMLEKSRGNDSADEYVLADIEHIPLPDGSVDLCFSNLAIQWC SSLHAALAEMHRVVKPGGKVVFSSLAQGSLAELAQAWQQVDGKTHTNQFLAFEAIKLACA PFSHDLHLTQETEFYPDVMTLMKSLKGIGATHLHQGRDSGLTSRGRFERLASVYPQQEAG FPLSYQLVTGVLYRE >gi|316920349|gb|ADCU01000001.1| GENE 441 481838 - 482545 383 235 aa, chain + ## HITS:1 COG:bioD KEGG:ns NR:ns ## COG: bioD COG0132 # Protein_GI_number: 16128746 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Escherichia coli K12 # 11 234 1 225 225 280 65.0 2e-75 MNEQEKDLSKLGEAWFVTGTDTEVGKTVVSAALLEAAANIGKVTAGYKPVASGSEWRNGE LRNTDALALQSASSISLSYAEVNPYTFEEPTSPHIISADEGKPIAFSVMSEGLQALRKKA DWVLVEGAGGWYTPLSESTSFAQWAQQEQLPVILVVGVKLGCINHALLTAQAVQQSGLRL GGWVANCVIEPGPRHAEYMATLRRLLPVACLGEIPHLPQANARALARYLDLSFLY >gi|316920349|gb|ADCU01000001.1| GENE 442 482702 - 482956 82 84 aa, chain + ## HITS:1 COG:no KEGG:Dd1591_1131 NR:ns ## KEGG: Dd1591_1131 # Name: not_defined # Def: hypothetical protein # Organism: D.zeae # Pathway: not_defined # 1 82 1 82 89 116 63.0 3e-25 MSRAVHPKKDIEQVLNFVEQNGWRIEVGGSHAWGKMYCPYPNEKCRCGEFCITCIWSTPK NAMNHARQLKKVVEHCAHHEKQST >gi|316920349|gb|ADCU01000001.1| GENE 443 482966 - 483499 286 177 aa, chain + ## HITS:1 COG:no KEGG:Slit_1140 NR:ns ## KEGG: Slit_1140 # Name: not_defined # Def: prophage CP4-57 regulatory # Organism: S.lithotrophicus # Pathway: not_defined # 1 172 1 171 191 169 47.0 3e-41 MKDYEFTLIFSLSDQNDDPSNYIEALGAAGCTDATIGIGVNGRIALSFCREAKDARGAIS SAIKDVLSAIPNAVLSEAAPDFVGLTDIAERVGFSRQNMRKLMEQGGMSFPAPLHQGKTS IWHLANVLTWLRDVKHYAIDTRLLELAAVNMQCNLHRSLNEADSRYQREITGWLEKP >gi|316920349|gb|ADCU01000001.1| GENE 444 484425 - 486443 1872 672 aa, chain + ## HITS:1 COG:YPO1156 KEGG:ns NR:ns ## COG: YPO1156 COG0556 # Protein_GI_number: 16121452 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Yersinia pestis # 1 672 1 671 671 1125 88.0 0 MSKMFKLHSTFKPDGDQPEAIRRLEAGLENGLAHQTLLGVTGSGKTFTIANVIADLNRPT MVMAPNKTLAAQLYGEMKQFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSVNEHIE QMRLSATKALLERKDVIVVASVSAIYGLGDPDAYLKMMLHLTRGMIIDQRAILRRLSELQ YARNDQAFQRGTFRVRGEVIDIFPAESEDEALRVELFDEEVERLSLFDPLTGQLIQEVQR FTVYPKTHYVTPRERILQAMEEIKVDLAERRQVLLANNKLLEEQRLTQRTQFDLEMMNEL GYCSGIENYSRYLSGRKPGEAPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGNYELEKSGGDIVDQVVRPTGLLD PLIEVRPVATQVDDLLSEIRIREAINERVLVTTLTKRMAEDLTEYLDEHGVRVRYLHSDI DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG RAARNLNGKAILYGDRITNSMEKAIGETERRRAKQQAYNLEHGITPQALNKKVSDILQLG EASSRSKGKHGRSSKAAESSAAYQALSPKQIEQRIRDLEAQMYKHAQNLEFEEAASLRDD IQALRDQFIAMS >gi|316920349|gb|ADCU01000001.1| GENE 445 486562 - 486858 271 98 aa, chain + ## HITS:1 COG:YPO1157 KEGG:ns NR:ns ## COG: YPO1157 COG4628 # Protein_GI_number: 16121453 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 69 1 69 81 102 76.0 2e-22 MSAQSSKDPLHGVTLEALLTSLVARYGWAELAKIININCFKSDPSIKSSLKFLRRTPWAR QKVEELYIDSLGDVPAAASVTPAESPWDKWKGKKLSDS >gi|316920349|gb|ADCU01000001.1| GENE 446 486923 - 487459 474 178 aa, chain - ## HITS:1 COG:BS_ywrO KEGG:ns NR:ns ## COG: BS_ywrO COG2249 # Protein_GI_number: 16080652 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Bacillus subtilis # 3 153 2 152 175 166 50.0 2e-41 MKKILVLAAHRFPDQSRISHAAIDALKTQKNVTVNELMREYPDYSIDIEREQKLLKEHDI VIMLFPFYWYSSPAILKEWQDAVLTYGFAYGSEGKALHGKSLMIATSTGGNAQAYTAEGY NRYPVADLLLPFNNMCHLVGMHWLEPYLIQGANDITDRLIDDGVNGLLTRIRELQNAG >gi|316920349|gb|ADCU01000001.1| GENE 447 487564 - 488457 526 297 aa, chain + ## HITS:1 COG:RSc3332 KEGG:ns NR:ns ## COG: RSc3332 COG0583 # Protein_GI_number: 17548049 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 6 297 2 296 298 147 35.0 2e-35 MSLPTDVYRLIPAFLASADAQSFSAAARQLGISAAAVSKNVRVLETRLNMRLFARNTHFV VLTEEGRQFRQRIAPVWQALNQALDNRSPYEEPSGLVRVSVIPGFGRHRLMPLIPVFQQR FPQVRIDLEMEPRLVNLIAENIDVAIGQRTATDSRLIGRELGSASSNMAASPNYLARFGI PQTLGDLASHRRLLHRNPGNGKLLCWWDDETSVSEEQAAFISTSPDTLVDAALCDMGIVC LADWYLEEHFRNERLIPILKPFWPRPRSMHIWYPSADLPPRVRAWVDFVLAQFPPQA >gi|316920349|gb|ADCU01000001.1| GENE 448 488474 - 488902 415 142 aa, chain - ## HITS:1 COG:ECs3535 KEGG:ns NR:ns ## COG: ECs3535 COG2128 # Protein_GI_number: 15832789 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 141 1 142 143 174 61.0 4e-44 MSQLRLAYGKLSPEAYNGLIQTSMALSKSSLGHIVELVYLRISQINGCAFCLDMHSTALR KAGYSQNKMDILAGWRMAEPFDERERAALAWAEAVTDISYCGTSDELFAELKTHFSDAEI ADLTFAISLMNAFNRMAISMRQ >gi|316920349|gb|ADCU01000001.1| GENE 449 489034 - 490485 511 483 aa, chain + ## HITS:1 COG:ECs3534 KEGG:ns NR:ns ## COG: ECs3534 COG1167 # Protein_GI_number: 15832788 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli O157:H7 # 17 473 2 443 444 360 45.0 2e-99 MAASYEFLFVDPSSKEPLYRQIYQRIKSAIADGVLSSGERLPSLRGLASDLNVARGTVEA AYALLSGEGYIENSGQGGTRVSLRLIAPKLTETSKKLAEMPRHAGMPLPSAQLLPFQLGV PALDAFPLGQWNRLLAQCARHTTREELSHPAPQGYLPLREALAGYLQISRGIRCSAQQIF IAAGYRSALSLIAHAVLSRDDSVWLEEPCFPFPWHVLQSLGVSTIPVPVDDQGICVEQGI KQSPQALAALVTPAHHSPLGLSLSLPRRMQLLAWAQHEQRWIIEDDYDGEFHYQGHPLPA LKSLDRLDRVLYVGTLSKVLFPGLRIAYVVVPEQLLPQFHQTLRTYPCVCPTLMQATAAQ FIHSGQFYRHLKKMRSLYAQRRMWLAQALKQQTQYPLTTELQAGGMHLLVRLPDCFDDTL VEREARVQGLAVEALSVWYHGTVPVSQGIILGFTNVESEEMAQRWVNILLNVLARCSTIA DRR >gi|316920349|gb|ADCU01000001.1| GENE 450 490543 - 491487 723 314 aa, chain + ## HITS:1 COG:ECs3026 KEGG:ns NR:ns ## COG: ECs3026 COG0042 # Protein_GI_number: 15832280 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Escherichia coli O157:H7 # 6 314 2 310 316 546 83.0 1e-155 MQTVKRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDSLLPEKVYYRLCPELAHQ SRTPSGTAVRVQLLGQYPQWLAENAARAVELGSWGVDLNCGCPSKMVNGSGGGATLLKDP EMIYQGAKAMREAVPAHLPVTVKVRLGWDSGDRQFEIADAVEQAGATEITVHGRTKEDGY KAEKINWAAIGKIRQRLNIPVIANGEIWDWQSAQDCMATTGCDSVMIGRGALNVPNLSRV IKYHEPKMLWPEVMLLLKKYVRLEKQGDTGLYHVARIKQWLGYLRKEYTEASEVFSEIRA LKTSSDIARAIERL >gi|316920349|gb|ADCU01000001.1| GENE 451 491504 - 492424 658 306 aa, chain - ## HITS:1 COG:ECs2140 KEGG:ns NR:ns ## COG: ECs2140 COG0697 # Protein_GI_number: 15831394 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 290 1 288 299 285 57.0 7e-77 MSVRDMLLALCVVVIWGVNFVVIKVGLHGMPPLLLGALRFIFVVIPAIFFIPRPKIPLKG IVIYGLTISFAQFAFLFCAINLGMPSGIASVVLQSQVFFSILLGALILGEKVKRSQIVGI LLAAAGMFVLAKGGMTGNLTDIPLIALLFTLAAGFSWACGNITNRSIMQNAGTTSIMSLV VWSALVPILPFLLCSWLFEGQAAIENSLANIHLPTILALCYIAFLSTHVGYGLWGRLLTR YETWRVTPFALLVPVVGLTSGALILGEKIASLQIYGLLLIMLGLLINVFGGRMMTKRIHC PAIEKD >gi|316920349|gb|ADCU01000001.1| GENE 452 492628 - 493416 651 262 aa, chain + ## HITS:1 COG:YPO2509 KEGG:ns NR:ns ## COG: YPO2509 COG4106 # Protein_GI_number: 16122730 # Func_class: R General function prediction only # Function: Trans-aconitate methyltransferase # Organism: Yersinia pestis # 1 254 1 254 258 303 59.0 2e-82 MSDWDPELYLRFEAERTRPARELLARIDRPDAQRVSDLGCGPGNSTELLAQSWPQAQVTG VDTSLAMLQKAQKRLPYCSFVQSDISHWQPDEAQDVIYANAALQWVLDHETLLPHLVSQL ADNGILAIQMPDNLNQPSHALMRKVASEGPWTYLNAEAESVRKKLLTTEEYYDLLALQGC EVDIWRTTYYHVMPSVSAIIEWLSSTGLRPFLDKLDEEQQPEFLRRYLNELEKVYTPRAD GKVLLAFPRLFIVARNVENGAI >gi|316920349|gb|ADCU01000001.1| GENE 453 493765 - 494712 678 315 aa, chain + ## HITS:1 COG:YPO1176 KEGG:ns NR:ns ## COG: YPO1176 COG1686 # Protein_GI_number: 16121471 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Yersinia pestis # 18 313 17 311 311 382 70.0 1e-106 MPVKLRYSLLSLLLLLGSSVASVPNVLASENAPTTHNASSLVLASGSAMVVDLKTHNVIY SSNPDVQVPIASITKLMTAMVALDAKPAMDEVISVDIHNTKELKGVFSRVRVGSEVSRRQ MMLMALMSSENRAAASLAHHYPGGYNAFIKAMNAKARSLGMTHTRYVEPTGLSVKNVSTA RDLTKLLAASKNYPLISQLSTTETQSVTFSNPVYTETFNNTNHLVRNDKWAIQLTKTGFT NQAGHCLAMRTTIGGRQVALVVLDAFGKYTHFADANRLRDWMLTGKAAPVPAAALSYKKQ KGIHQAGSVQVAENK >gi|316920349|gb|ADCU01000001.1| GENE 454 494879 - 495802 826 307 aa, chain + ## HITS:1 COG:PA1857 KEGG:ns NR:ns ## COG: PA1857 COG2354 # Protein_GI_number: 15597054 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 306 1 303 307 350 67.0 1e-96 MAGGSLLTLLDDIASVLDDVALMSKMAARKTAGVLGDDLALNAQQVTGVSADRELPVVWA VAKGSLLNKVILVPLALLISAFAPWAITPLLMLGGAFLCYEGFEKLAHKVMHGKEEKHSS ESKPEEKVPDDLRAYEKSKVKGAVRTDFILSAEIVAITLGTVASAPFLQQVIVLSGIALV MTLGVYGIVAGIVKLDDLGLWMSQKSSALLQRVGGWIVDAAPYLMKILSVVGTAAMFMVG GGIIVHGLPWIHHYFEHLAESGADLPTIGTVISGIGPTVLNMVFGVIAGAVVLLVVSGVG KLIPRKG >gi|316920349|gb|ADCU01000001.1| GENE 455 496227 - 496463 121 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPIVVRSVKTGMMKRGHPRSGLGGGAKLGCRGQRLAPRLGRLHGVHVGFGALGVRNLLHK LMHTKPLTVQAQKDLGGI >gi|316920349|gb|ADCU01000001.1| GENE 456 496662 - 497474 874 270 aa, chain - ## HITS:1 COG:nlpA KEGG:ns NR:ns ## COG: nlpA COG1464 # Protein_GI_number: 16131531 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli K12 # 22 270 24 272 272 397 79.0 1e-111 MKFRLSAILLATALGALFLTGCDNKADQANHIKVGVINGAEQDVAEVAQKVAKEKYGLDV ELVGFSGSLLPNDATDKGELDANVFQHRPYLAEQNKAHGYKLVAVGNTFVFPMAGYSDKI KNVSELKKGDTIAIPNDPTNLGRALLLLQKEKLITVNQDKGLLPTSIDITSNPLNLNIME LEGAQLPHVLKDPKVTVAIISTTYLQQTGLSPVKDSVFIEDKESPYVNIIVTREDNKDAA NVRDFVKSYESPEVAAAAEKIFNGGAVQGW >gi|316920349|gb|ADCU01000001.1| GENE 457 497742 - 498332 442 196 aa, chain + ## HITS:1 COG:no KEGG:SEN2163 NR:ns ## KEGG: SEN2163 # Name: yohC # Def: hypothetical protein # Organism: S.enterica_Enteritidis # Pathway: not_defined # 3 196 2 195 195 236 63.0 2e-61 MSNHVWGLLSHPAQEFRQIRQENESVSHIYTHHVLLMAAIPVVCSFIGTTQFGWDFGGDR VFKVLPMTALAIAVVFYGLMLAAVGFVGMVIRWMAREYENCPSLNRCIVFAGYVGTPMFL SSIVSIYPMVWLCMLAVIVGVCYSGYLLYRGIPNFLGITEDQGFIFSGSTFAIGVLVLEL LLGITVIMWGYGSHIF >gi|316920349|gb|ADCU01000001.1| GENE 458 498495 - 498839 397 114 aa, chain - ## HITS:1 COG:no KEGG:SG0423 NR:ns ## KEGG: SG0423 # Name: yajD # Def: hypothetical protein # Organism: S.enterica_Gallinarum # Pathway: not_defined # 1 114 1 114 115 226 95.0 2e-58 MAIIPKNYARLETGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSN WELLCLYCHDHEHSKYTEADQYGSTVIAGEDAQKDVGEATYNPFADLKTMLNKK >gi|316920349|gb|ADCU01000001.1| GENE 459 498918 - 499016 127 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLKKAIIAGMALLTLGGVGGVILAGIIIYVRS >gi|316920349|gb|ADCU01000001.1| GENE 460 499212 - 500297 548 361 aa, chain + ## HITS:1 COG:PA5102 KEGG:ns NR:ns ## COG: PA5102 COG3239 # Protein_GI_number: 15600295 # Func_class: I Lipid transport and metabolism # Function: Fatty acid desaturase # Organism: Pseudomonas aeruginosa # 11 319 2 310 312 205 47.0 9e-53 MKKAIRGMRSSHYLHAEQQSCIGAWKRQWVWRSELPTWCVLIAIYAGWALVVYHWEQLGK WLGTPLLVLLACWYMSLQHELIHGHPTRWPRVNQLLGLMPLAVWYPFGIYRDSHLAHHRD ASLTHPLEDPESYYFSECRWKNSSAMWRRVIWLRNTFFGRMIIGPALGIGALVKGELGDI MQGESKKIAMWLIHLSLLGLILWIVQLAGMSAWWYLLAISYPALGLAMVRSFYEHRAVDD PSARSIINEAAWPWRLLFLNLNYHIVHHDLPSLPWYGLRKVYLAYRMEYRQRNQGFVVQG YSQWWRQYAWRSINVTQHPLMALTRDESPEHLGSGDRNNNDEEPLWQEIYLWDARFWHLW R >gi|316920349|gb|ADCU01000001.1| GENE 461 500246 - 501178 1062 310 aa, chain + ## HITS:1 COG:STM2165 KEGG:ns NR:ns ## COG: STM2165 COG1732 # Protein_GI_number: 16765495 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Salmonella typhimurium LT2 # 5 309 1 305 305 424 72.0 1e-119 MAGNLSMGRKILASLALMGASICAAQAADAVTVGSKIDTEGSLLGNLIVQTLDANGIKTV NKTQLGTTKVLRGAITAGEIDIYPEYTGNGAFFFADENDPAWKNAQQGYDKVKQLDLAKN QIVWLTPAPANNTWSIAVRNDIAQQNHLESLEDLGKWLKQGGKFKLAASAEFIERPDALP AFENAYGFKLDQDQLLSLAGGDTAVTIKAAAEQTSGVNGAMAYGTDGPVAALGLKTLSDP KGVQPIYAPTPIVREATLKAHPEIATVLKPVFESLDGPTLQKLNAKIAVDGQDAKKVAAK YLKDKGFVKS >gi|316920349|gb|ADCU01000001.1| GENE 462 501272 - 502423 970 383 aa, chain + ## HITS:1 COG:YPO1197 KEGG:ns NR:ns ## COG: YPO1197 COG1174 # Protein_GI_number: 16121490 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Yersinia pestis # 1 383 2 384 384 308 57.0 1e-83 MVKNRVVLTLWLLMMLALWQMPLLTQAANRLVSGSGVPLGEIIHGYAWILILPFPVLFLL CFCPQNRSSLWLIYLISGALFAGLMLLIAWQSHLLAGDEDSLVRVSLGGAFWLIGALALL CGADAVSRLTKSSGLRILAALLILAPVPILLLSGALDTLSLMKEYANRDDVFNQALGQHL ALLLSTLSFALIIGIPLGVLAARRESWRKPMFSVLNIIQTIPSIALFGLLIAPLAGLAQA WPWLGELGISGIGVAPALIALVLYALLPLVRSVVAGLEQVPSPVIEAARGVGMTRAQILR KVELPLALPVVLSGARIVAVQTVGMAVIAALIGAGGFGAIVFQGLLSSALDLVLLGVIPV VVMAVTVDTLFKFLVSRIEAARQ >gi|316920349|gb|ADCU01000001.1| GENE 463 502483 - 503355 829 290 aa, chain + ## HITS:1 COG:YPO1198 KEGG:ns NR:ns ## COG: YPO1198 COG1125 # Protein_GI_number: 16121491 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, ATPase components # Organism: Yersinia pestis # 1 289 22 310 312 412 74.0 1e-115 MHIAEGEFTVLIGTSGSGKSTTLKMINRLIDHDSGELTFAGQNISSFEPEALRRRMGYAI QSIGLFPHWTVEQNIATVPQLLKWPTARIRERVTELMEMLSLDVAEFRHRYPHQLSGGQQ QRVGVARALAADPEVLLMDEPFGALDPVTRTTLQQEIARIHTLLGRTIVLVTHDIDEALS LADRIVLMDAGKVIQQGTPQELLNHPVNDFVRQFFGHSDVGIKLLGLDVVASRVRRGEIL QGESIRSDLNLRDAMSLFIYRQVARLPVIDEAGQPVGVLYFSDLVKKAEA >gi|316920349|gb|ADCU01000001.1| GENE 464 503355 - 504137 422 260 aa, chain + ## HITS:1 COG:YPO1199 KEGG:ns NR:ns ## COG: YPO1199 COG1174 # Protein_GI_number: 16121492 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Yersinia pestis # 10 251 26 267 278 298 70.0 9e-81 MSEKRPSFTWRWYRDPLLWGVLLLIGLNSGMPHMGRLFSALFPDLTRPVYQQDSFWSLTI AHVTLVGISSLIAVVLGVSAGLLVTHRVGREFRSLVETVTAVGQTFPPVAVLAVAVPLMG FSPEPAVIALVLYGLLPILQGTISGIESVPAAVRETARGAGMSRWQILWRAEIPLAAPVI LAGVRTSVIINIGTAAIASTVGVKTLGSPIIIGLSGFNTAYVIQGALLVALLAMITDAVF ERWVSYLTRWRSGALFIEGS >gi|316920349|gb|ADCU01000001.1| GENE 465 504141 - 504932 398 263 aa, chain + ## HITS:1 COG:PA5101 KEGG:ns NR:ns ## COG: PA5101 COG3221 # Protein_GI_number: 15600294 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, periplasmic component # Organism: Pseudomonas aeruginosa # 43 202 45 204 265 126 40.0 5e-29 MRVSLPMYAVNRADVELLWQGLSRWLAQEGETNLPAALCWPDDLYDHWQQPDLLLSQTCG YPLQEALQQNVAVVGVFRYRVPGCEGNDYRSFLVARKKDAGADISAFYGRKAAYNSEDSQ SGYNALRSVIAPLASRGRFFANTLQTGSHRASLLAIRQGDADIAAIDCVTLALLQKADPQ CMNGLKIIGETPPAPALPLITAAGDDARLLRLRHALKKMVADPSMSAVRSRLFIGGFSTI AASEYQRCTEMKLRAAALGVTRL >gi|316920349|gb|ADCU01000001.1| GENE 466 504945 - 505400 415 151 aa, chain - ## HITS:1 COG:YPO3033 KEGG:ns NR:ns ## COG: YPO3033 COG1671 # Protein_GI_number: 16123210 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 6 150 2 146 152 229 78.0 1e-60 MSEAKQIWVDADACPNVIKEVLFRAADRVGIFVTLVANQTIRTPPSRFIRSLRVEAGFDV ADNEIVRRVNPGDLVITADIPLAAEVLEKGGVALNPRGELYTEANIKERLNMRDFMDTMR SSGIQTGGPAALHQRDRQEFANQLDRWLQKR >gi|316920349|gb|ADCU01000001.1| GENE 467 505400 - 506317 671 305 aa, chain - ## HITS:1 COG:hemF KEGG:ns NR:ns ## COG: hemF COG0408 # Protein_GI_number: 16130361 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase # Organism: Escherichia coli K12 # 3 302 2 299 299 509 80.0 1e-144 MSKPSSAQVKAFLLNLQDSLCQQIAAADGQSTFREDNWQREAGGGGRSRVLTQGAVFEQA GVNFSHVTGGQLPASATAHRPELAGRSFEAMGVSLVIHPQNPYVPTSHANVRFFIAEKEG EEPVWWFGGGFDLTPFYPFKDDVLHWHRTARNLCLPFGEDVYPRYKKWCDEYFYIKHRQE SRGVGGLFFDDLNTPDFDHCFAFMQAVGAGFSDAYLPIVAKRKDMPFSDRERQFQLYRRG RYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDFHPEPDSPEAALERDFLPVQD WLGEE >gi|316920349|gb|ADCU01000001.1| GENE 468 506440 - 507312 625 290 aa, chain - ## HITS:1 COG:STM2450 KEGG:ns NR:ns ## COG: STM2450 COG0860 # Protein_GI_number: 16765770 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Salmonella typhimurium LT2 # 5 288 2 289 289 333 63.0 3e-91 MKNFSHFRLLPKYTSRRQFLLSGLAAIALTGSKIGDASANSTALTAKPVRKEPGARKVIM LDPGHGGIDPGAVGHQGAKEKHVVLEIAHYIRDYLHKNSNIDVKMTREDDFFIPLYKRVE IAHQHQADLFVSIHADGFTSPTASGASVFALSNRGASSTMAKYLSQRENDADKVAGAKYA DEDNNYLQQVLFDLVQTDTIKNSLTLGRHLLDHIKPVHHLHSQHTEQAAFAVLKSPSIPS VLVETSFITNHQEEQLLTSVAFRQKISQAIATGIVKYLDYFDAHERRRPS >gi|316920349|gb|ADCU01000001.1| GENE 469 507601 - 510747 1618 1048 aa, chain + ## HITS:1 COG:YPO1654 KEGG:ns NR:ns ## COG: YPO1654 COG3250 # Protein_GI_number: 16121921 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Yersinia pestis # 12 1038 14 1057 1060 1373 63.0 0 MTSVQIDNSFSSLSAVLFRRDWENPACTQYRRLAAHPPFCSWRSEQEARDGQASDQLISL NGAWAFSYFSQPERVPEAWLQHDLDNADELQVPSNWQMAGYDAPIYTNVTYPFPVNPPFV PKENPTGCYSLSFSVDDEWLEQGGQTRIIFDGVNSAFYLWCNGEWIGYSQDSRLPAEFDL SHALRKGKNRIAVMVLRWSDGSYLEDQDMWRMSGIFRDVTLLYKPRVHLHDIQLRTHLAA GFHCAELEAQIHVNQSAGGYCARVALWRGHKLVAERKQAICSETIDERGAYDDRTTLRLQ VDKPLLWSAEEPHLYRAVISLLDEQGKVVDVEAYDVGFRQVEISHGQLKLNGKPLLIRGT NRHEHHPENGQAMDEETMRRDIMLMKQHNFNAVRCSHYPNHPRWYQLCDQYGLYVVDEAN IETHGMVPMNRLSDDPVWFNAMSERVTRMVQRDRNHPCIIIWSLGNESGHGCNHDALYRW IKTNDPTRPVQYEGGGANTAATDILCPMYARVEQDQPHPTVPKWSIKKWIGMPDEARPLI LCEYAHAMGNSFGGFDRYWQAFRKHPRLQGGFVWDWVDQALSQKDENGEPHWAYGGDFGD RPNDRQFCMNGLVFPDRTPHPALYEAQRAQQFFQFHLLSQHPLTIEVNSEYLFRSSDNER LCWNLALDGKLIAQGDIEILLPPQGSQHIVLGEIPELSRCGDGELWLNVEIRQIKRTTWS EANHRCAWEQWRVARPQALPADHSEEVSDAQDELPTLNTFDDLFSIEWGSQRWQFSRQTG LLEQWWRHEHASLLTPLCDNFTRAPLDNDIGVSEVTRIDPNAWVERWKKAGMYALETHLQ QCEADLISRGVQICTTHVYTYQRRPLFISRKTYLIDRQGRLHIDVNVDVTYGIPAPARIG LSCQLTDVAEYASWLGLGPHENYPDRLLSAQHGRWTLPLSELHTPYIFPTENGLRCYTRQ LNFADWAWQGNFHFGLSRYSQQQLTETSHHHLLREEQGVWVNIDGFHMGVGGDDSWSPSV SPEFLLSATYYAYSLIWQMCSEKPIETA >gi|316920349|gb|ADCU01000001.1| GENE 470 510820 - 511245 458 141 aa, chain + ## HITS:1 COG:ECs3305 KEGG:ns NR:ns ## COG: ECs3305 COG0456 # Protein_GI_number: 15832559 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Escherichia coli O157:H7 # 1 141 38 178 178 246 81.0 8e-66 MEIRVFKQADFEEVTTLWERCDLLRPWNDPETDIERKLNHDADLFLVAEVGGEVVGTVMG GYDGHRGTAYYLGVHPDFRGRGIANALISRLEKKLIARGCPKIQILVGEENDAVIGMYEK LDYETQDTLCMSKRLIEDHEY >gi|316920349|gb|ADCU01000001.1| GENE 471 511323 - 511772 380 149 aa, chain + ## HITS:1 COG:no KEGG:SSPA0392 NR:ns ## KEGG: SSPA0392 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_AKU12601 # Pathway: not_defined # 1 149 1 148 149 118 48.0 5e-26 MSHRSYSPDDFNNHGMLSLPWAFWLVLVLQAKTWFLFVIAGSSRQQGADLLTLFYPDRGL FWSGMLAGLPAALGFLLSGRRHLWKGIWKVWRWVLIATTLVQMGLQAVPFWTDGGDVTLL SLAILLLDLIALAYLLFNSRLIDSFNVSE >gi|316920349|gb|ADCU01000001.1| GENE 472 511716 - 511898 95 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQMLLGIGRRLAPEKVYLAGWSSPERKSAETFQVIQQNSTSKLLAYVEAINQTRVEQQIS >gi|316920349|gb|ADCU01000001.1| GENE 473 511897 - 512481 529 194 aa, chain + ## HITS:1 COG:no KEGG:PC1_0763 NR:ns ## KEGG: PC1_0763 # Name: not_defined # Def: hypothetical protein # Organism: P.carotovorum # Pathway: not_defined # 1 193 1 197 203 247 61.0 2e-64 MNFRPLLLVVPLLLTGCSTMSNLSWSSMSPLNWFGSSVEVSDMGIAGINASTPLNEAAIN KALDDNYRLRSGMGTRNGTVTSFYQALDGDTVVMTISGDDNGKVKRVNVESDAIKTAWGV KIGTPFSDLYEKAYGVCQKGQGDNANDVECVSKESRHVSYLFSGEWRGPEGLMPSDDTLK DWKISQIVWHANAI >gi|316920349|gb|ADCU01000001.1| GENE 474 512729 - 513628 889 299 aa, chain + ## HITS:1 COG:YPO3025 KEGG:ns NR:ns ## COG: YPO3025 COG2837 # Protein_GI_number: 16123202 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Yersinia pestis # 1 299 1 299 299 456 72.0 1e-128 MSQPQSGILLEHCRFGIFIEALVQGDLDAVRQGCKTFVNSLQALQKQYPQDRLGAVIAFG NDVWRDISAGVGAPDLKPFTPLGKGLAPATQRDLFIHIQSLRHDINFSLAQAALAAFGNT IKVEEEIHGFRWVEERDLSGFIDGTENPKDEQRPIVGVVGNDDADAGGSYAFVQRWEHNL KQWGRFSTEQQEQIIGRTKHDSEELDPESRPETSHVSRVDLSEEGKGLKILRQSLPYGTA SGAHGLMFVAYCGRLHNIEKQLLSMFGDLDGKRDQLLRFSKAVTGSYYFAPSLERLMSL >gi|316920349|gb|ADCU01000001.1| GENE 475 514202 - 515206 1001 334 aa, chain + ## HITS:1 COG:YPO3015 KEGG:ns NR:ns ## COG: YPO3015 COG4150 # Protein_GI_number: 16123194 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Yersinia pestis # 11 334 20 345 345 548 82.0 1e-156 MKLNKLKGWTLATLLISGSASAAELLNSSYDVSRELFAALNPAFETQWQKEGNPALTIKQ SHAGSSKQALAILQGLRADVVTYNQVTDVQILHDRGNLIPADWQARLPNNSSPFYSTMAF LVRKGNPKQIHGWNDLVRSDVKLVFPNPKTSGNGRYTYLAAWGAANLQDGGDQAKSREWM KRFLGNVEVFDTGGRGATTTFVERNLGDVLISFESEVKNIQKQYGDAGYEVIVPPVDILA EFPVAWVDKNVERNGTEKAAKAYLNYLYSPEAQKIITSFNYRVYDKQAMAAAKEQFPETK LFRVEEQFGSWPEVMTTHFATGGELDQLLAEGHR >gi|316920349|gb|ADCU01000001.1| GENE 476 515206 - 516045 901 279 aa, chain + ## HITS:1 COG:YPO3014 KEGG:ns NR:ns ## COG: YPO3014 COG0555 # Protein_GI_number: 16123193 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type sulfate transport system, permease component # Organism: Yersinia pestis # 6 279 4 277 277 408 91.0 1e-114 MLLSRAAPKRVLPGFTLSLGSSLLYTCLILLLPLSALVMQLAQMTWQQYWDVITNPQVVA AYKVTLLAAGVASVFNAVFGMLMAWILTRYEFPGKTLLDGLMDLPFALPTAVAGLTLAGL FSTTGWYGQWLALIDIKVAFTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAQTLG ASRWQSFRKVVFPEVAPALLAGTALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQ EFDYPAASAIASVILAASLLLLFSINTLQSRFGKRIGGH >gi|316920349|gb|ADCU01000001.1| GENE 477 516045 - 516923 717 292 aa, chain + ## HITS:1 COG:YPO3013 KEGG:ns NR:ns ## COG: YPO3013 COG4208 # Protein_GI_number: 16123192 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, permease component # Organism: Yersinia pestis # 1 289 1 286 291 428 82.0 1e-120 MADLSAWQGNAQQLRPKTDWLKWFLIGSGVLLSVLLLLVPMISIFAIAFSEGAGVVWKNL SDPDMLHAIWLTVLVALITVPVNLIFGTLLAWLCTRFVFPGRQLLLTLIDIPFAVSPVVA GLLYLLFYGSNGPLGGWLDAHDIQLMFSWPGMVMVTVFVTCPFVVRELVPVMMSQGSHED EAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPL QVELLHQDYNTAGAFTAAALLTLMAIVTLFLKNMLQWRLNRQVVHAEREGAK >gi|316920349|gb|ADCU01000001.1| GENE 478 516920 - 518014 1048 364 aa, chain + ## HITS:1 COG:YPO3012 KEGG:ns NR:ns ## COG: YPO3012 COG1118 # Protein_GI_number: 16123191 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Yersinia pestis # 1 364 1 363 363 617 82.0 1e-176 MSIEIKQVNKYFGRTKVLNDISLTIPSGQMVALLGPSGSGKTTLLRIIAGLEGQSGGQLS FNGHDVSRLHARDRRVGFVFQHYALFRHMSVFDNVAFGLTVLPRRERPSTAAIKQKVEQL LEMVQLAHLADRFPSQLSGGQKQRVALARALAVEPEILLLDEPFGALDAQVRKELRRWLR QLHEELKFTSVFVTHDQEEAMEVADQIVVMSQGNIEQIGTPDDVWREPASRFVLEFLGEV NKVDGEIRGSHIYIGEHHWPLAFSPLHQGKVDMFLRPWEMEVSLQANARCPLPVQVLEVS PRGHYWQLTVQPQGWHPEPISVVMLEGNGTQAPKRGGHYFVGGLNARLYAGDTPLQPVAL AKSA >gi|316920349|gb|ADCU01000001.1| GENE 479 518132 - 519016 521 294 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 294 3 305 308 205 38 4e-51 LVSSLESCIGNTPLVQLQRMASGLGSEVWVKLEGNNPAGSVKDRAALSMIQQAELRGEIK PGDTLIEATSGNTGIALAMIAAMKGYRMKLLMPENMSKERQASMRAYGAELILVSREQGI EGARDLAQQMADRGEGLILDQFNNADNPLAHFTTTGPEIWQQTQGKVTHFVSSMGTTGTI TGVGRFLKQQSDTVQIVGLQPSEGASIPGIRRWPQAYLPGIYRPDLVDRVLDMSQLLAEE TMRRLAREEGLFCGVSSGGAVAGALRVAEEFPGSVVVAIICDRGDRYLSTGVFD >gi|316920349|gb|ADCU01000001.1| GENE 480 519138 - 519692 320 184 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|10955257|ref|NP_052373.1| ## NR: gi|10955257|ref|NP_052373.1| protein K [Escherichia coli] # 2 182 7 187 188 191 55.0 2e-47 MLAALVPAMLVMGGCDDASKEKAAPVADQSNEQSAATQPNAKKDQETNDVDKKLKAIQDQ STPEKIEQFNKLQDNDTQKFQQAVVLEIKKKLPLLVDEATLMSDVSAENNAFTYKYIVKG IPINVIESHEWQETMKKTITSSYCSDDARVTVFRNLFPEGVIYNYYVSEKLIYTYKALPS VCGK >gi|316920349|gb|ADCU01000001.1| GENE 481 519911 - 520420 592 169 aa, chain - ## HITS:1 COG:YPO2995 KEGG:ns NR:ns ## COG: YPO2995 COG2190 # Protein_GI_number: 16123176 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Yersinia pestis # 1 169 1 169 169 270 94.0 8e-73 MGLFDKLKSLVSDDKKDTSSIEIFAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKM VAPVDGTIGKIFETNHAFSIESDSGIELFVHFGIDTVELKGEGFKRIAEEGQRVKKGDVV IEFDLALLEEKAKSTLTPVVISNMDEIKELTKLSGTVIVGETPVIRIKK >gi|316920349|gb|ADCU01000001.1| GENE 482 520467 - 522194 1807 575 aa, chain - ## HITS:1 COG:YPO2994 KEGG:ns NR:ns ## COG: YPO2994 COG1080 # Protein_GI_number: 16123175 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Yersinia pestis # 1 575 1 575 575 939 88.0 0 MISGILVSPGIAFGKALLLKEDEIIINRKKIAAEEVEQEIARFKAGRDKASEQLETIRVK ASETFGEEKAAIFEGHIMLLEDEELEQEIIALIKDSKMTADAAAHEVVEGQAKALEELDD EYLKERAADVRDIGKRLLMNILGMTIVDLSAIQEEVILVATDLTPSETAQLNLNKVLGFI TDLGGRTSHTSIMARSLELPAIVGTSDVTKQVKNGDFLILDAVNNKIYVNPTAEIVEELK AVQNQYVSEKNELVKLKDLPAITLDGHQVEVCANIGTVRDIAGAERNGAEGVGLYRTEFL FMDRDAFPTEEEQFQAYKAVAEGMGSQAVIVRTMDIGGDKDLPYMDLPKEENPFLGWRAI RICLDRKEILHAQLRAILRASAFGKLRIMFPMVISVEEVRELKGELELLKAQLREEGKAF DETIEVGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNELISHLYNPMSPS VLTLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSSISIPRIKKIIRNS NFEDVKALADEALNQPTAEDLMNVVNKFIEEKTLC >gi|316920349|gb|ADCU01000001.1| GENE 483 522245 - 522502 352 85 aa, chain - ## HITS:1 COG:ECs3287 KEGG:ns NR:ns ## COG: ECs3287 COG1925 # Protein_GI_number: 15832541 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 85 1 85 85 129 100.0 2e-30 MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTV VTISAEGEDEQKAVEHLVKLMAELE >gi|316920349|gb|ADCU01000001.1| GENE 484 522903 - 523871 704 322 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 311 3 304 308 275 50 3e-72 MSKIFEDNSLTIGHSPLVRLNRIGNGRILAKVESRNPSFSVKDRIGANMIWDAEKRGILK PGIELVEPTSGNTGIALAFVAAARGYKLTLTMPETMSLERRKLLKALGANLVLTEGAKGM KGAIAKAEEIVASDPKRFVLLQQFSNPANPEIHEKTTGPEIWEDTDGEVDVLISGVGTGG TLTGTTRYLKKTKGKQIITVAVEPETSPVITQALAGEEIKPGPHKIQGIGAGFIPDNLDL ELVDRVELVGNDEAIAMARRLMEEEGILAGISSGAAVVAAVKLANDPDFTDKTIVVILPS SGERYLSTALFADLFTEQELQQ >gi|316920349|gb|ADCU01000001.1| GENE 485 524060 - 524641 407 193 aa, chain - ## HITS:1 COG:YPO2991 KEGG:ns NR:ns ## COG: YPO2991 COG2981 # Protein_GI_number: 16123172 # Func_class: E Amino acid transport and metabolism # Function: Uncharacterized protein involved in cysteine biosynthesis # Organism: Yersinia pestis # 1 191 53 243 244 296 83.0 1e-80 MSHVPEWLQWLSYLLWPLAVISIVLVFSYLFSTIANWIAAPFNGLLAEQLEGVLTGKPLP DTSIWSVVKDVPRIMAREWKKLAYYLPRAIVLLILYFIPGVGQTVAPVLWFLFSAWMMSI QYCDYPFDNHKVSFPDMRNALRRNKVDNLQFGALTSLFTMIPILNLVIMPVAVCGATAMW VDRYRAEYSRIQP >gi|316920349|gb|ADCU01000001.1| GENE 486 525080 - 526099 744 339 aa, chain + ## HITS:1 COG:YPO2990 KEGG:ns NR:ns ## COG: YPO2990 COG3115 # Protein_GI_number: 16123171 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Yersinia pestis # 1 335 2 323 328 347 61.0 2e-95 MQDLRLILIVVGAVAIIALLLHGLWTSRKERSSLFRDRPAKRTKKQRDEQSLAEVDEGVG EVRVQRSSKPVQKPVEPAFGQFSETQDDRPDPLDSVRAPSRPTAQPSSVVREQHEPSDPL LGDALFGDDDENDYRQPAQKPIRHSQPAEPSLHRHEPAHHVEDDDEISAPRVSASYDDEE YEDEAPQAEPVTPAEPEKVTETVLVLHVAAHHGSVIGGEVLLQSVLQSGFQFGAMNIFHR HLNPAGSGPVLFSMANMVKPGNFDPDNMSDFSTPGISFFMMVPSYGDANQNFKLMLQSAQ RIADDVGGVVLDDERRMMTPQKLEIYKARIREVLDNTAK >gi|316920349|gb|ADCU01000001.1| GENE 487 526178 - 528214 1745 678 aa, chain + ## HITS:1 COG:YPO2989 KEGG:ns NR:ns ## COG: YPO2989 COG0272 # Protein_GI_number: 16123170 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Yersinia pestis # 7 677 2 669 670 1100 83.0 0 MTSTTGQQLQQQLDQLRTALRHHEYQYHVLDAPEIPDAEYDRLMRELRALEEQHPELITP DSPTQRVGAAPLSAFSQVRHEVPMLSLDNVFDDESYLAFDKRVHDRLKTAEPLTFCCELK LDGLAVSLLYEDGVLVRGATRGDGTTGEDITANVKTIRAIPLRLQGDNIPRRVEVRGEVF MPLAGFEAMNEEARRKDGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGLMDGGEL PASHYARLQQFKAWGLPVSDRVKRCTGSDEVLKFYRQVEQERPTLGFDIDGVVIKVDSIE IQEQLGFVARAPRWATAFKFPAQEQMTVVNGVEFQVGRTGAITPVARLEPVLVAGVIVSN ATLHNADEIDRLGLRIGDTVIVRRAGDVIPQVVGVVEAQRPENAQEIVFPQHCPVCGSDV ERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIEQLVEKEYVKTPADLY RLTAGILTGLDRMGPKSATNLVNALAKSKETTLARFLYALGIREVGEATAANLAAHFGSL EALREADVEALKSVQDVGEVVAKHVRHFLGEEHNQKVIDELISDEIGIHWPAPQVIVAEE IDSPFAGKTVVLTGSLSLMPRDEAKDRLAALGAKVSGSVSKKTDMVIAGEAAGSKLAKAQ ELGIPVIDEAEMIRLLGL >gi|316920349|gb|ADCU01000001.1| GENE 488 528283 - 528504 329 73 aa, chain + ## HITS:1 COG:YPO2988 KEGG:ns NR:ns ## COG: YPO2988 COG3530 # Protein_GI_number: 16123169 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 69 1 69 71 109 88.0 1e-24 MEKENLIEIANMVMPFGKYKGRVLIDLPEEYLLWFARKDEFPQGKLGELMQITLAIKIEG LEGLVKPLKRQRN >gi|316920349|gb|ADCU01000001.1| GENE 489 528545 - 528949 345 134 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENPIIEVSAKSFLTASKVNKRQRMLLYIWFGFGQPLLIIGVWLAIVFFLYSYLLNSHDL LSNLNRLGDYSLIIISMGIVLALWFALRYLWKVLIMMRNHELQQRIGETHPQQAHRIVKV MHDEAGNITHIQPQ >gi|316920349|gb|ADCU01000001.1| GENE 490 528930 - 530207 779 425 aa, chain - ## HITS:1 COG:RSp0288 KEGG:ns NR:ns ## COG: RSp0288 COG1215 # Protein_GI_number: 17548509 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Ralstonia solanacearum # 15 423 12 423 424 519 58.0 1e-147 MSHFFTSDIPTLLFGFVFYYPFFMAWLWMLGGLIYFVAYERHDDFTHPDFSEAVTPRISI IVPCYNEEQNVREVISHLQTLNYPDYEVLAVNDGSKDRTGEILNELVAQFPTLVAIHQDK NQGKAVGLNTAAQLATGDFILCMDGDALLDANALHFLVRHFVKHPRMGAVTGNPRIRNRT SLLGRMQVGEFSSTVGLIKRCQQVFGRLFTVSGVIALFRKSALEEVGYWSVDMLTEDIDI SWKLQTHGWEISYEPRALTWILTPETLMGLYRQRLRWSKGGVQTVFKYFPAMFTPRNRMM LPLFCEYVVSIFWAYCMAFAFLLMFADAFFLLPTKWQISVVPVWNGMVLGVTCLLQLLVS CLIDRRYDRGILKCYLWTIWYPLIFWLINVVTSLVAVPSVLFRRQGARAVWVSPDRGIQH GKSDH >gi|316920349|gb|ADCU01000001.1| GENE 491 530204 - 532318 1343 704 aa, chain - ## HITS:1 COG:RSp0287 KEGG:ns NR:ns ## COG: RSp0287 COG0726 # Protein_GI_number: 17548508 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Ralstonia solanacearum # 8 678 16 684 724 673 50.0 0 MTSITRLITALILSIMLFQGAFAAEQLPPIDIQPPADPDDGVTFRVLAFHDVRDNLRASF ETYPDATAIDTKTLASVFAWLKENDYHMISVDQIIAARQGKKKLPPRSVLLSFDDGYRSF YTHVFPLLKAYGYPAVQELITDWVNHPADEKIKISATVTLPGDYFLNWAEVAEMQRSGLV EFASHTHNLHHGMLANPQGNELPAATALRYLSDEKRYETENEYTQRVRDDLATSAHLIQQ YTGKAPRIMVWPYGAYHQPVQAIARSLGMPIMFTLDSGANSPSVPLDKITRILIGYDTTT SLLKQELRAPAKYNGNIYPVERVVHVDLDYVYDPDPRQQDKNLSCLLDRIKDLAPTSVYL QAFADPDGSGLIKEVYFPNSVLPMRADLFSRVSWQLQTRTHVNVFAWMPVLSFALPKNNP AADKWVTSTHSQTRASMSPYPRLSPFEPDVRATITQLYHDLARYTPFQGILFHDDAALSD DEDTRPAALAQYRAWGLPDDISKIKADPTLMRIWTDKKTDFLISFTQQLAGEAQKNQFAS ANMMTARNLYAQPVMEETAEHWYAQSLPKFLASYDYTALMAMPFMESSATPDRWLTQLYQ KVAAQPLGIQKTVFELQSHDWRKKQPIDSHVLLHQLTLLRALGARHLGYYPDDFLNNQPN TEIIRPLMSAQSDVIERKPLPKCHSQIVQEGVKQPSIKQWRTAP >gi|316920349|gb|ADCU01000001.1| GENE 492 532315 - 533526 724 403 aa, chain - ## HITS:1 COG:no KEGG:BPP2318 NR:ns ## KEGG: BPP2318 # Name: hmsH # Def: putative hemin storage protein # Organism: B.parapertussis # Pathway: not_defined # 1 399 254 661 661 273 37.0 8e-72 MRAQYTLYSGNITLGQRQIDNLVHSAPMNDDLLTTQAQAYLLRDLPTHSAQAYRIALNQT PDSLEARAGLGEASLARRDFELSQTIYQQLSHGFEDNHSVTQFVDHYQHEQLPYFTSDAS GGRGNGTLSDYDWQIDSHLYSALIQQNWRLFAHQFTGRGKTEEGTPLRVRNGAGIDFRAT QWLNTLEINRSNGSAAKTGVATQLSYLPSDHWQFDVGYDNNSNELAWKAYDNGISSKQTT AAVHYQTDSTRSAELSYQNQRLSDGNLSQTWQASATQMVWTKPRHRLDASLALSTSSNRL SDAEYFSPERDYSAGVTLLHQWTPWQSSRRHFTQRTYLTAGEYQQRHFGNSLFAELRLEH QWALTAYSELTYGIGINTHRYDESRENRTLFYLSLTLPLGSAL >gi|316920349|gb|ADCU01000001.1| GENE 493 533553 - 534251 413 232 aa, chain - ## HITS:1 COG:no KEGG:RSp0286 NR:ns ## KEGG: RSp0286 # Name: hmsH, RS03678 # Def: putative hemin-binding outer membrane transmembrane protein # Organism: R.solanacearum # Pathway: not_defined # 20 232 194 407 816 117 33.0 4e-25 MSYLNPRWENVAFAAFLILPTVPYPVCAAIVEEPSVSELMALGAPTLAWDKIQKKPQLNQ KLQAEEIAQHRLSLYLRWGLDESRNDNGPQRLIPLNETVNNEQEFLTTYTRKNASAYLQV LGDQIVALSAKGDARMAIVRADELEKLTALPAYVSVARGDAFMQLEQPEKAVASYEYALT HALPGEIDPIPTQEMLFYALLDCGRYEQAEKLLSDLEPNTPQWVRLSATADS >gi|316920349|gb|ADCU01000001.1| GENE 494 534731 - 535447 335 238 aa, chain + ## HITS:1 COG:YPO0804 KEGG:ns NR:ns ## COG: YPO0804 COG3710 # Protein_GI_number: 16121116 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Yersinia pestis # 10 99 12 102 238 66 36.0 5e-11 MKQGKITISTLTHKIVTVDGEEHTLRSKEYQMLCLLLERAPLCVTRREIISHVWSGTYSA DATINQTMKSIRRKLGDKDFTLIQTIPRMGYQIEHPELFSLEPIVNNDPTHQENSVSEKK QQSTFSSEVNKPKTQNIRQVNNDVYGIKRWSGSVTIGILCFICGVLWHGGTSTLPILLKS KARDDIPNSLISTAKQGGDSAIISDDYRFVCKYSWHGEEQFSLVCTKVKLSENETVEK >gi|316920349|gb|ADCU01000001.1| GENE 495 535715 - 536386 447 223 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_1250 NR:ns ## KEGG: NT01EI_1250 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 19 223 19 221 221 130 37.0 5e-29 MNIIPPVNARPDALSTLHGEKLTADMLTVKIDQLLNLLDRKDISPQQRETLIRALTSLQQ ERTLLRQLNTGAKPSQPSSLIQSNRPEGTAATRTVAADMQSTQPVVIGDTAKALMSKSEI QHALQVNQGLDKALGGLSPSSQASDVVRSPLENYLAVAAQNPVVNVKPDETENKITSVTD PKPLFGLIPQEWVPKSMRIPVRSSGWVVFVGVMILLGMVLWAW >gi|316920349|gb|ADCU01000001.1| GENE 496 536329 - 536556 57 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGGICGSDDFVGDGALGLVVINRIECVEDVILAGEGYVQKQKNASRRLLFYLNGGSCGIR TCDQLIKSQLLYQLS >gi|316920349|gb|ADCU01000001.1| GENE 497 537594 - 539009 1480 471 aa, chain + ## HITS:1 COG:YPO2984 KEGG:ns NR:ns ## COG: YPO2984 COG0008 # Protein_GI_number: 16123165 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Yersinia pestis # 1 471 1 471 471 874 87.0 0 MKIKTRFAPSPTGYLHVGGARTALYSWLFARHAGGEFVLRIEDTDLERSTQEAIDAIMDG MNWLNLDWDEGPYYQTKRFDRYNHVIDQMLEQGTAYKCYCSKERLEELRETQMANGEKPR YDGRCRHSHEHHADDEPHVVRFLNPQEGSVIFDDKIRGPIEFSNQELDDLIIRRTDGSPT YNFCVVIDDWDMEITHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSK RHGAVGVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSIDEMKEFFTLDDISKSASAFNT EKLQWLNHHYINTMPPEYVAIHLAWHIHEAGYETRNGPQLVEIVKLLAERCKTLKEMAAQ ARYFYEDFTEFDADAAKKHLRPVARQPLELVRAKLAAITDWTAENIHHAIQGTADELEVG MGKVGMPLRVAVTGAGQSPGVDVTVHAIGQQRSLKRIDMALAFIAEREAQQ >gi|316920349|gb|ADCU01000001.1| GENE 498 539120 - 539332 189 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKEWFTKKDLVNLGSGSSTPDKAWLTIFNQMSQEERQLLTTFVMREGIDALLCCLHTNA KTSHTLLMKN >gi|316920349|gb|ADCU01000001.1| GENE 499 539364 - 539759 300 131 aa, chain - ## HITS:1 COG:no KEGG:ETAE_1140 NR:ns ## KEGG: ETAE_1140 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 113 1 113 114 147 66.0 2e-34 MNKEWYAAKELVGIAGFPTTPQAINQRAKSEGWRKQKRSGVQGKALEYHISSFPDEVVSA LLANEESSFYLADMPKAEKAWSAIYYQLTEEERELLTRFIMRQGINALFERLGARPQAVT TPDEENIEPVS >gi|316920349|gb|ADCU01000001.1| GENE 500 540497 - 541699 1309 400 aa, chain - ## HITS:1 COG:YPO2983 KEGG:ns NR:ns ## COG: YPO2983 COG1972 # Protein_GI_number: 16123164 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Yersinia pestis # 1 400 1 394 394 539 81.0 1e-153 MSPILHFVLALAVVAVLALLVSRDRKSIRVRFIVQLLVVEILLAYFFLNSNIGLGFVKGF SGFFETLLKYAAEGTNFVFGNMSDKGLAFFFLNVLCPIVFISALIGILQHIRILPIIIRA IGTVLSKINGMGKLESFNAVSSLILGQSENFIAYKDVLGKMSEKRMYTMAATAMSTVSMS IVGAYMTMLDAKFVVAALVLNMFSTFIVLSLINPYSVDGEADIQLKNTHEGQSFFEMLGE YILAGFKVAIIVSAMLIGFIALIAALNGLTEWIFTFFHIEGMTFQRLLGYVFYPFAWVMG VPSHEALNVGSIMATKLVSNEFVAMIDLQKIATDLSPRSLGILSVFLVSFANFSSIGIVA GAIKGLNEHQGNVVARFGLKLVYGSTLVSILSASIAGLFL >gi|316920349|gb|ADCU01000001.1| GENE 501 542165 - 543337 1015 390 aa, chain + ## HITS:1 COG:YPO2982 KEGG:ns NR:ns ## COG: YPO2982 COG1914 # Protein_GI_number: 16123163 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Yersinia pestis # 1 389 22 409 409 546 82.0 1e-155 MGPAFIAAIGYIDPGNFATNIQAGASYGYKLLWVVVWANFMAMLIQLLSAKLGIATGKNL AEHIRDRFPRPAVWAYWVQAEIIAMATDLAEFIGAAIGFKLLLGCTLLEGAVLTGIATFL ILTLQRRGQKPLELVIGGLLLFVAAAYIVELVFSQPSIAQLAHGMLVPDLPTHEAVFLAA GVLGATIMPHVIYLHSSLTQTSSSKGTKAERYSSTKLDVAIAMTIAGFVNLAMMATAAAA FHFSGHSGIAELDQAYLTLKPLLGHAAATIFGLSLVAAGLSSTVVGTLAGQVVMQGFVRF YIPLWVRRVVTMLPSFIVIMAGLDATRILLLSQVLLSFGIALALVPLLRFTGNKELMGEM VNGRYVQNAGRVIVVIVVGLNFYLLASMLF >gi|316920349|gb|ADCU01000001.1| GENE 502 543399 - 543824 427 141 aa, chain - ## HITS:1 COG:no KEGG:YPTB2704 NR:ns ## KEGG: YPTB2704 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis # Pathway: not_defined # 23 132 35 137 137 100 49.0 2e-20 MYQRIAAIALAFCSLLPLGVAQATSADIDLLPGVTLHLGDRDQRGNYWDGYDWRDQSWWR SHQGRWIGDRSPRGYYWDGGRWRDQGWWHKNYYSRGGKYYRYKNKHYRHDNGNHYGHYKN GHDKNRDHDHHDDHGKGHGHH >gi|316920349|gb|ADCU01000001.1| GENE 503 544018 - 544584 540 188 aa, chain + ## HITS:1 COG:all1011 KEGG:ns NR:ns ## COG: all1011 COG0110 # Protein_GI_number: 17228506 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Nostoc sp. PCC 7120 # 1 185 7 191 192 206 54.0 2e-53 MSKSEKQKMIDGENYYSSDSELVADRTRAIDLCYRFNHTLPSQREARQALIHELLPHADK QAEITGPFFCDYGYNINIGQRFYANMDLTILDIAPVTIGDDVMFAPHVQLYTAAHPTNPE QRISGIEFGKPITIGNNVWIGGGVIVCPGVTIGDGSVIGAGSVVTKDIPPRVVAAGNPCR VLRSVDED >gi|316920349|gb|ADCU01000001.1| GENE 504 544581 - 545570 890 329 aa, chain - ## HITS:1 COG:YPO2980 KEGG:ns NR:ns ## COG: YPO2980 COG0667 # Protein_GI_number: 16123161 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Yersinia pestis # 1 328 1 329 329 528 76.0 1e-150 MSYLASPKRYQSMEYRRCGHSGLQLPAISLGLWHNFGDTTLFDNSRDMLLCAFDLGITHF DLANNYGPPPGSAETNFGRILQQDLMPYRDEMVISSKAGYTMWEGPYGDWGSKKYLIASL NQSLKRMGLDYVDIFYHHRPDPNTPLEETMGTLDLIVRQGKALYVGLSNYPAETARQAIK ILRDLGTPCLIHQPKYSMFERWVEGGLLDVLQDEGVGSIAFSPLAGGLLTDRYLHGIPPD SRAAHSKFLKPEAITEQKLGQIKKLNDMALARGQKLSQMALAWVLRGDRITSVLIGASRT SQIEDAVGMLENRHFSAEEISAIERILAS >gi|316920349|gb|ADCU01000001.1| GENE 505 545642 - 545845 80 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRVHCVNLAFHHAPQWVFTPLKSAPYTSNRQLNFRFCNACCTEIANWEHRNEQDFKPQYL QRVRLSP >gi|316920349|gb|ADCU01000001.1| GENE 506 545793 - 547466 1176 557 aa, chain + ## HITS:1 COG:STM2405 KEGG:ns NR:ns ## COG: STM2405 COG3961 # Protein_GI_number: 16765731 # Func_class: G Carbohydrate transport and metabolism; H Coenzyme transport and metabolism; R General function prediction only # Function: Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes # Organism: Salmonella typhimurium LT2 # 7 555 2 550 550 595 54.0 1e-170 MSKTLNRNIYSVSDYLLDRLSQAGIQHVFGVPGDYNLRFLDFVTAHPQLAWVGCANELNA AYAADGYARCAPAAALVTTFGVGELSAINGTAGSYAEYLPVIHIVGAPNRRSQQKGELLH HTLGDGDYGHFYRMAAEVTCSQAVLTPENAALEIDRVLSDVLYHRRPGYILLPSDVCDEP IRTELYPFAARQDEVTGLSEFIHAARDLLKPARKVALLADFLADRFGQKQRVQQLSDLQG VASATLLMGKGVLDESRPNFIGTYAGGASQPKVKAAIENADVLISIGVRLTDSVTAGFTH QIAADKTIDLQPFSASVAGQVFSQLPMGDALAALTELAKELSVEWQAPESLRDCLPESHG NKLDQPAFWQQMQRFLRPDDIVVAEQGTASFGSATLRLPKGVTFIVQPLWGSIGYTLPAI LGAQLAQPHRRVVLIIGDGSAQLTIQELGTLLRHGLKPVIILLNNDGYTVERAIHGPEES YNDIAAWNWTKIPSALSVNGDFSTYKADSVPALEKVLSEVNVPKALTLIEVMLPKMDVPE YLAKLSKAIAERNAAHE >gi|316920349|gb|ADCU01000001.1| GENE 507 547483 - 548352 438 289 aa, chain - ## HITS:1 COG:STM3020 KEGG:ns NR:ns ## COG: STM3020 COG0583 # Protein_GI_number: 16766322 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 284 1 284 287 363 64.0 1e-100 MRYSPEALNAFVETVSAGSFSAAARRLHKSQSTISTAIANLEDDLGVILFDRSARQPVLT EQGQRVLIHVQEILAASERLDQLAVRLMDQIEPRLTFVLSDTFHPSALEALLHEFDHRYP DTEFECLIGEEEDVIDLLQKNRAHIGLIEARKSYPPDISAARLSKQTEMAIYAAPTHPLA QRERIRPEELNAVRELRLSTYLERDQARMHGVIWSAPNYLLLLSMAVQGLGWSVLPCALV DEFCHRDELVPLSVPGWPKSTSVDVVWSKSSPPGPAGSWIKDYLLGMPA >gi|316920349|gb|ADCU01000001.1| GENE 508 548460 - 548912 472 150 aa, chain + ## HITS:1 COG:STM3021 KEGG:ns NR:ns ## COG: STM3021 COG4125 # Protein_GI_number: 16766323 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 146 15 160 160 191 69.0 4e-49 MQRKTLMERVFHAVTFEAIATLICAPVGAYLMQRSVWEMGGLTIILATAAMIWNIIYNAI FDRIWPVSRVVRNVKVRIFHALGFECGFIVIGVNIAAFVLGISMLQAFLLELGIILFFLP YTMLYNWVYDILRERIVERRSARKMASTLR >gi|316920349|gb|ADCU01000001.1| GENE 509 548985 - 549686 602 233 aa, chain + ## HITS:1 COG:YPO2758 KEGG:ns NR:ns ## COG: YPO2758 COG1794 # Protein_GI_number: 16122962 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Yersinia pestis # 1 229 2 230 231 311 66.0 8e-85 MKTLGLLGGMSWESTVPYYRIINETVKNQLGGLHSARLVLYSVDFAEVEHLQMRGEWAQA GELLADAAQRLQAAGAEGIVVCTNTMHKVAEQIESRCGLPLLHIADATAARIKAQGLTRI GLLGTRFTMEQDFYRGRLTDKFGIEVIVPNESDREVIHRIIYQELCLGQIRPESRQQYRE IMQRLSEQSAQGIILGCTEIALLVAQTDAVVPLFDTAQIHAEYAAHWALGHAS >gi|316920349|gb|ADCU01000001.1| GENE 510 549866 - 550831 946 321 aa, chain + ## HITS:1 COG:ECs3268 KEGG:ns NR:ns ## COG: ECs3268 COG0837 # Protein_GI_number: 15832522 # Func_class: G Carbohydrate transport and metabolism # Function: Glucokinase # Organism: Escherichia coli O157:H7 # 1 318 1 318 321 561 82.0 1e-160 MTTHALVGDVGGTNARLALCSLENGEISQAKTYSGLEFDSLEATIRTYLQEHNVSVKEAC IAIACPVTEDWVAMTNHSWAFSIAEMKKNLALEKLEVINDFTAVSMAIPMLKPEHLMQFG GKEPQKDKPIAIYGAGTGLGVAHLIHAADRWISLPGEGGHVDFAANSEEEDMILEVLRPE LGHVSAERILSGPGLVNLYHAIVKSDGRLPENLAPKDVTERALADSCTDCRRALSLFCVI MGRFGGNLALNMATFGGVYIAGGIVPRFLEFFKASGFRAAFEDKGRFKDYVHDIPVYMIT HDNPGLLGAGAHLRQELGIKL >gi|316920349|gb|ADCU01000001.1| GENE 511 550925 - 551326 301 133 aa, chain - ## HITS:1 COG:no KEGG:YE0960 NR:ns ## KEGG: YE0960 # Name: hdeB # Def: acid-resistance protein # Organism: Y.enterocolitica # Pathway: not_defined # 60 132 37 109 110 63 41.0 2e-09 MNNNIFAVALIGALLATTCAYATSVEGCEQQNSMVIPIDTSAGTVQTANLKESKNTSVHM SCEDFLALDTQAQTPVVFWVSNLDPNDQGNDDVDQRQIDEFVTPMVIEECHKTPALKLVD LKSKIEQYIQRHF >gi|316920349|gb|ADCU01000001.1| GENE 512 551602 - 552336 690 244 aa, chain - ## HITS:1 COG:ECs3261 KEGG:ns NR:ns ## COG: ECs3261 COG3279 # Protein_GI_number: 15832515 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Escherichia coli O157:H7 # 1 244 1 244 244 360 75.0 1e-99 MKAIIVEDEFLAQEELSYLVRTHSKIQIVGTFDDGLDVLKYLQHNEVDAIFLDINIPSLD GVLLAQNLSKFARKPQIIFITAYKEHAVEAFELEAFDYILKPYHESRIITMLQKLEASHQ RDQELTQNNTVTRPAPKTINLIKDERIIVTECNDIYYAAADEKVTRVFTRREEFVMPMNI TEFCNRLPEEKFFRCHRSYCVNLAKIREIVPWFNNTYVLRLTDLEFEVPVSRGKIKAFRQ LMRL >gi|316920349|gb|ADCU01000001.1| GENE 513 552333 - 554024 1322 563 aa, chain - ## HITS:1 COG:ECs3260 KEGG:ns NR:ns ## COG: ECs3260 COG3275 # Protein_GI_number: 15832514 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Escherichia coli O157:H7 # 1 542 7 550 565 798 73.0 0 MLLAVFERAALMLICIFFLTRIRLFRQLLQKEQHTRIELAAVTAIFTTFALFSTYNGISV EGALINVRIIAVVSGGILFGPWVGIITGVIAGVHRYLIDMDGVTAIPCLISSIVAGIISA WIHQRMAKEKRWSAGILAGMLCESLTMLLIIAFIDSKPLGIDIVEHIGLPMILGAGCIGL IVLLVQSVEDEKEVIAARQAKLALDIANKTLPYFRNINNDSLMTICSIIRDDINADAVAI TNTENILAYVGVGQEQYNIGQELISDVTRQTIQRGDITINNNDEAHRTPQIHSQIIIPLR EKGEVTGTLKIYYCHAHKITYSLKVMAVGLSQIISTQIEVSRIEQLREMADKAELRALQS KINPHFLFNALNAISSSIRTNPDTARQLIINLASYLRFNLELNDEHIDIKRELHQVQDYV AIEKARFGNKLTVIFDIDDVDLTIPSLLIQPLVENAIVHGIQPCRGKGVVAIAVKKKDNR IRISIKDTGNGISQETIDRVERGDMPGNKIGLLNVHQRVKLLYGDGLHIRRLEPGTEIYF YITPSVSTHSELSVLEPKEVNTP >gi|316920349|gb|ADCU01000001.1| GENE 514 554235 - 554609 563 124 aa, chain - ## HITS:1 COG:no KEGG:SG1969 NR:ns ## KEGG: SG1969 # Name: msyB # Def: hypothetical protein # Organism: S.enterica_Gallinarum # Pathway: not_defined # 1 123 1 124 124 122 66.0 5e-27 MDMYLTLDEAIDAARETYLADHENSDDASQVAQFNLQKYVMQDGEIMWLAEFHATEDEGG EGVPMFSGEAAQAIFDNDYDEVEIREEWITENTLYEWDEDDFQYEPPLDTEEGEAASDEW EEQN >gi|316920349|gb|ADCU01000001.1| GENE 515 554802 - 555134 206 110 aa, chain + ## HITS:1 COG:DR0054 KEGG:ns NR:ns ## COG: DR0054 COG1416 # Protein_GI_number: 15805095 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 1 110 4 111 111 60 32.0 1e-09 MKVVMHVSESTHCISAFNNATNLLKARSGAFTDIHIIFTGSAISTLIADSDESPNWEALQ QANVVLLACENAMRANNITLDKLLMGVNAVPAGILALVEHQENGYFYIKP >gi|316920349|gb|ADCU01000001.1| GENE 516 555631 - 557127 1591 498 aa, chain + ## HITS:1 COG:STM1150 KEGG:ns NR:ns ## COG: STM1150 COG3131 # Protein_GI_number: 16764506 # Func_class: P Inorganic ion transport and metabolism # Function: Periplasmic glucans biosynthesis protein # Organism: Salmonella typhimurium LT2 # 2 498 15 511 511 784 75.0 0 MLATTQAWAFSLDDVAKKAQSLAGESFKAPKSNLPSEFREMKFADYQQIQFNHDKPYWNN LKTPFKLEFYHQGMYFDTPVKINEVTATSVRQIKYNPDYFNFGSVKHDPEAVKDLGFAGF KVVYPINQAGKNDEIMSMLGASYFRVVGKGQVYGLSARGLAIDTALPSGEEFPRFREFWI ERPKAKDKHLVIYALLDSPRATGAYRMIVTPGTDTVVDVQSRVYLRDKVGVLGMAPLTSM YLFGSNQPSSNVNYRPQLHDSEGLSIHAGNGEWIWRPLNNPKHLSVSTFSVENPKGFGLL QRTRDFSQYEDLDDRYDLRPGAWVEPRGVWGKGKVELVEIPTADETNDNIVAFWIPASLP EVGKPINLDYRLHFTRDEAKLHDPELAWVKQTMRSTGDVKQSNLIREPDGTTALIVDFVG PALKALTPDAPVTTQVTTDDNTKLVQNDLRYNPVTGGWRLTLRFNVIDNKKPVEMRAYLV KEDKPLSETWSYQLPANE >gi|316920349|gb|ADCU01000001.1| GENE 517 557120 - 559669 1824 849 aa, chain + ## HITS:1 COG:ECs1427 KEGG:ns NR:ns ## COG: ECs1427 COG2943 # Protein_GI_number: 15830681 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 846 11 843 857 1249 72.0 0 MNKSIENADAYLKALAMSAEQEAALRQQMAASQEISVDAVHRSLASDDVQLSDLEAQDAP LCSVESRLEMGWSDTLEEKALLTKDAAGRTAIKAMPVIKRTSMFPEKWRTNPVGRLWDSL LGRTQPPKHQFKTAAEAEADKRWRKVGSMRRWVLLILMLTQTVIATWYMKTILPYQGWDL IDPLSMFDKPLMQSVLELLPYVLQSGILVLFAILFCWVSAGFWTALMGFLQLLIGRDKYS ISATTVGDEALNPNHRTALIMPICNEDVSRVFAGLRATYESVVATGQIEHFDIFVLSDSY DPDICVAEQKAWMEICKEVGGEGRIFYRRRRRRVKRKSGNIDDFCRRWGGEYSYMVILDA DSVMSGECLTNLVRLMEANPSAGIIQSAPKATGMDTLYARIQQFATRVYGPLFTAGLHFW QLGESHYWGHNAIIRVKPFIEHCALAPLPGNGTFAGSILSHDFVEAALMRRAGWGVWIAY DLPGSYEELPPNLLDELKRDRRWCQGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLW FMFLVLSTALQVVHTLMEPQYFLQPRQLFPVWPQWRPELAIALFSTTLVLLFLPKLLSVV LIWAKGAKEYGGSFRLLISMLLEMLFSVLLAPVRMIFHTVFVVSAFLGWSITWQSPQRDD DATPWGEAFRRHGSQCLLGLIWAGGVAILDLRFLWWLSPIVVSLILSPIVSVITSRRTLG VKCKRAKIFLIPEEYSPPVEMVATERYVEMNNQRELDHGFLRAVFDPSYNALATAMATAR HHAHAAISKAREERVEKALSGAPQDLSRDERLALLSDPVTLARLHQLVWNAPDRYPQWTQ AYQALKPAA >gi|316920349|gb|ADCU01000001.1| GENE 518 559749 - 560570 560 273 aa, chain - ## HITS:1 COG:no KEGG:ETAE_1151 NR:ns ## KEGG: ETAE_1151 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 110 267 1 158 158 177 49.0 4e-43 MRHQEILLTAATLLSVILSQSSAMAAPPLISSQHIVRSNNIILMEGDIIGPAKSYHQYVI GPESQDTLRDISIEFARNGQISSASQSYGPNPVWESRLVPDDIGWMSRSVVAVQTNNEQD VSQLISAYKTDERGRIVKVTEVEAGDKTIGITNQYYFYTPDDLVRFYVAVGHNPGFGVYL YRPDGRLEKVIKNDNDSVSSFTDDGKDLSSMTKTPHVTYITECQKWDNSGNCVQSEKQEI ISFDYQGETKSITSRFMLQQDILYYPPHRTTAP >gi|316920349|gb|ADCU01000001.1| GENE 519 560700 - 561164 333 154 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154175150|ref|YP_001408716.1| 30S ribosomal protein S15 [Campylobacter curvus 525.92] # 30 152 3 128 130 132 51 3e-29 MVAPKRFIYQLIEPYYLSDFHYPEPPMLRLSTLDHLVLTVADINKSVQFYQQVLGMEVET FGSEGRTALKFGEQKINLHAAKAPFRPHAKHPTPGSADLCFITPQPVQEVVLWVIGCGVE VIEGPVTRTGATGKINSIYLRDPDGNLIEIANRL >gi|316920349|gb|ADCU01000001.1| GENE 520 561226 - 562005 648 259 aa, chain - ## HITS:1 COG:moeB KEGG:ns NR:ns ## COG: moeB COG0476 # Protein_GI_number: 16128794 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Escherichia coli K12 # 12 257 3 248 249 363 69.0 1e-100 MAPEIPVSSPEELSDAEMMRYNRQIVLRGFDFDGQEKLKASHALIIGLGGLGCPASQYLA AAGVGTLTLVDFDTVSLSNLQRQILHSDARIGMAKVESAAQSLRVVNPHTQLRPINAVLD DVALAELIEKSDVVLDCTDNVDIRDRLNRLCFSQRKPLVSGAAIRMEGQVSVFTYQDNEP CYRCLSRLFGANALTCVEAGVMSPLVGIIGATQAMEAIKLLSHFGRIPHGQVMMYDAMSS QWRTMKLAKNPTCDVCGNA >gi|316920349|gb|ADCU01000001.1| GENE 521 562008 - 563246 1124 412 aa, chain - ## HITS:1 COG:YPO1495 KEGG:ns NR:ns ## COG: YPO1495 COG0303 # Protein_GI_number: 16121768 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Yersinia pestis # 1 410 1 410 424 575 70.0 1e-164 MDCYNTSDLISIEQALDKLLTQTSAITDREDIALTEAAGRITAQPVISPINVPPFANSAM DGYAVRLQDVTPDAVLTIAGKAFAGSPFSGEWPAGTAIRIMTGAPVPAGADAVIMQEQAE VSEQGVRFTAMPQQGQNIRLAGEDIQKGAEVLAAGVRLGTAELPLLASLGIARLQVVRRL KVALFSTGDELQPVGTPLQEGQIYDTNRFAVRLMLEQMNCDIIDLGIIRDDPQALREAFK AGDLQADLLISSGGVSVGEADFTKQILDEVGKISFWKLAMKPGKPFAFGQLNRALFCGLP GNPVSAVVTFYQLVQPLIAHLSGDKSWQAPARLKAKAMTPLKKSPGRLDFQRGIVSANAQ GELEVRTTGHQGSHVFSSFTLGNAFIVLERERGSVKAGELVDVELFNPLLRF >gi|316920349|gb|ADCU01000001.1| GENE 522 563653 - 564498 671 281 aa, chain - ## HITS:1 COG:YPO1501 KEGG:ns NR:ns ## COG: YPO1501 COG0627 # Protein_GI_number: 16121774 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Yersinia pestis # 3 277 4 278 280 434 78.0 1e-121 MDSLELLEEHRLFNGWQQRYRHASDALNCLMTFSIYLPPTADDAPPPVLYWLSGLTCNDE NFSTKAGAQRIASELGLALVIPDTSPRGNEVPNDVSYDLGQGAGFYLNATQSPWNSHYRM DDYITQELPELIRNHFNVGDKQSISGHSMGGHGALTLALRHPQRYLSVSAFAPIVNPTQV PWGRKAFAAYLGEDPSIWQSYDSCYLITQCKPSFPILIDQGDDDQFLADQLQPAKLAELA RQHDWPLTLRIQPGYDHSYYTIATFIEDHLRFHAQHLGLAQ >gi|316920349|gb|ADCU01000001.1| GENE 523 564592 - 565716 1155 374 aa, chain - ## HITS:1 COG:YPO1502 KEGG:ns NR:ns ## COG: YPO1502 COG1062 # Protein_GI_number: 16121775 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Yersinia pestis # 3 373 1 371 377 687 89.0 0 MQMIKTRAAVAWGPNQPLTIEEVDLMPPQKGEVLVRIVASGVCHTDAYTLSGKDPEGVFP AILGHEGAGIVEAIGEGVTSVAVGDHVIPLYTPECGKCKFCLSGKTNLCQAIRETQGKGL MPDGTTRFSKNGKPIFHYMGTSTFSEYTVLPEISLAKISKEAPLEEVCLLGCGVTTGMGA VVNTAKVKTGDSVAVFGLGGIGLSAIIGAKMAGAGRIIGVDINTDKFELAKKLGATDVIN PKDYDKPIQQVIVELTDGGVDFSFECIGNVDVMRSALECCHKGWGESVIIGVAGAGEEIS TRPFQLVTGRVWRGSAFGGVKGRTQLPGIVQRYMDGEFALNDFITHTMSLDEINDAFDLM HEGKSIRTVIHFDR >gi|316920349|gb|ADCU01000001.1| GENE 524 565703 - 566677 754 324 aa, chain - ## HITS:1 COG:YPO1503 KEGG:ns NR:ns ## COG: YPO1503 COG0583 # Protein_GI_number: 16121776 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 288 1 288 289 452 79.0 1e-127 MDLTQLRMFCSVAETGSVARAAELLHRVPSNLTTRLRQLEQELGTDLFIREKQRLRLSPM GHNFLNYAKRILALSDEAMSITHAGEPAGNFALGSMESTAATRLPALLAAYHQNFPQVAL SLVTGTSGEIIEKVRAGTLSAGLADGPINHDELNGCIAFREEMVVISSLEHPPITRAKDV ADETLFAFRPSCSYRLRFESWFQQDGAVPGAIMEIQSYHAMLACAASGAGIAMIPRSVLS LLPGHERVAVHTLPDSIAQTATRLIWRRDAFSPNVRELKMQIIEQERIQESVEEKNESEH AEVTVSEPTIVLHQEEPGAHHAND >gi|316920349|gb|ADCU01000001.1| GENE 525 566810 - 567970 1011 386 aa, chain + ## HITS:1 COG:YPO1504 KEGG:ns NR:ns ## COG: YPO1504 COG0477 # Protein_GI_number: 16121777 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 372 1 372 383 500 79.0 1e-141 MAVRIALSGFLALVVAMGIGRFAFTPQVPLMIAEHQFSLTGAGLVAALNYLGYLAGAFDA MRASRSVERRLQLGLWGAVVLTLLSACVSGFWWHSLIRFAIGWASGWAMVLVAAWTNERL AHFGKPNLAAAVFAGPGAGIFISGILSVAISALHLDAAQAWLVYGVLALVLIAAVARFLP KAGELHRPDVPAEPLVLTPALKRLVWSYSLAGFGYILPATFLSQMAHARFPASLFAQFVW PVFGFSAVVGIGLGILTRRWLMTQQRLAIVLWIQALGIVFSETVPGVSGLVLGALLTGGG FLCVVQLSLQYGRELAPAHIRYMAGLLTTGYAVGQLVGPMLSALSTSLTHRLEPALYIAA IGLIVAGGLVFRVQPALSAKTDRVES >gi|316920349|gb|ADCU01000001.1| GENE 526 568111 - 568773 611 220 aa, chain + ## HITS:1 COG:ECs3045 KEGG:ns NR:ns ## COG: ECs3045 COG0302 # Protein_GI_number: 15832299 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Escherichia coli O157:H7 # 1 219 1 221 222 358 89.0 6e-99 MSLLSKEAAQVHAALEARGLETPLRGEVLDRETRKQRIKEHMTEIMQLLNLDLTDDSLAE TPHRIAKMYVDEIFSGLDYANFPKITVIENKMKVDEMVTVRDITLTSTCEHHFVTIDGKA TVAYIPKDCVIGLSKINRIVQFFAQRPQVQERLTQQILVALQTLLGTNNVAVSIDATHYC VKARGVRDATSATTTTSLGGLFKSSQNTRQEFLRAVRHHG >gi|316920349|gb|ADCU01000001.1| GENE 527 568860 - 570071 958 403 aa, chain + ## HITS:1 COG:YPO1506 KEGG:ns NR:ns ## COG: YPO1506 COG2311 # Protein_GI_number: 16121779 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 19 391 1 373 388 396 62.0 1e-110 MLQRLQASEPDAVVKPTQLKSRIGTLDFARGLAILFILLMNITGFGLPKAAYLNPAYNGL PDGADTLTWGILHIFVQGKFLAMFAFLFGAGLQLLMPKGKQWLRARLSWLVLFGLVHAIF FWDGDILLAYGLIGLISWRMIRDAGSTLQLLRTGLVLYAIGLGLLLLLGLIAGPEPSSFW LPGYAAIQYEEIWKVHGGWEAWRNRSDLLSANLMALAVQYGWQLAGLMLTGAALMRSGWL SGNFSQRHYRRMALWSLLVGLCIQIPTTLAQWLNDWEYHVSGYLLQVPSELAAPLMMIGY VSLIYGFWPQLSRLKMAYALRQVGRMALSNYLLQTLLCTTLFYHLGMFNQWSRSTLLWVV PAVWLINILFSLFWLSHFKQGPVEWLWRKLTVLGSRSVQQNNL >gi|316920349|gb|ADCU01000001.1| GENE 528 570296 - 571294 882 332 aa, chain + ## HITS:1 COG:STM2191 KEGG:ns NR:ns ## COG: STM2191 COG1609 # Protein_GI_number: 16765521 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 332 1 332 340 441 67.0 1e-123 MITIRDVARLAGVSVATVSRVLNNTAITTAETKAVVQSAVAELGYRPNANAQALATQSSD MLGVVVMDVSDPFFGALVKGVDEVAQRERKNLLIANSYHDADKERKAIEMLIRQRCNALI VHAKMLSDEELVAFMHQVPGMVLINRIVPGYEHRCVGLNNQAGGQMATQLLLDKGHRRIG FLGSNHDIEDQRMRKKGYEIALHSAGIEGSKAWYAYASPDLQGGEAAMVELLGRNQQLSA VFAYNDAMAAGALAVLKENGISIPEQFSIIGFDDIPIARYTSPKLTTIRYPIVSMATLAT ELALKSVHQTPLSPEGHCFMPTLVQRWSVGSR >gi|316920349|gb|ADCU01000001.1| GENE 529 571653 - 572651 1075 332 aa, chain + ## HITS:1 COG:YPO1507 KEGG:ns NR:ns ## COG: YPO1507 COG1879 # Protein_GI_number: 16121780 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 1 331 1 335 335 526 84.0 1e-149 MNKKTFTLATLAASMMFGVAAQAATTNLGVTIYKYDDNFMSVVRKALENDAKADPSVKLL MNDSQNDQSKQNDQVDVLMARGVKGLAINLVDPAAAPTIIDKARANDVPVVFFNKEPSRK ALDSYDKAYYVGTDSKESGIIQGELIAKHWKANPNWDLNKDGEIQFVLLKGEPGHPDAEA RTTYVVKSLNDKGIKTQQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMG AVEALKAHNKTNIPVFGVDALPEALALVKSGAMAGTVLNDANNQAKATFDLTKNLAEGKP AGEGTHWKIDNKIVRVPYVGVDQDNLAQFIKK >gi|316920349|gb|ADCU01000001.1| GENE 530 572776 - 574374 198 532 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 305 510 17 217 245 80 25 1e-13 MFIQVGVMPENSFTDSSLTKAPVSEQITSAPDHHDATYLLEMDNINKSFPGVKALDNVNL RVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSIIFQGKEINFKSAKEALEHGVSMVH QELNLVLQRSVMDNMWLGRYPMKGIFVDQDKMYHDTKAIFDELEIDIDPREKVAGLSVSQ MQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKDRGCGIVYISHKMEEIFK LCDEITILRDGQWIATQTLDGMNMDQIISMMVGRSLTQRFPDRVNTPGPVILEVRELTSL RQPSIRDVSFDLHEGEILGIAGLVGAKRTDIVETLFGIREKVKGTIRLRGKAINNHSANE AINHGFALVTEERRSTGIYAYLDIGFNSLISNIRKYKNKVGLLDNRRMKSDTQWVIDSMR VKTPGHHTSIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLMTELAK KGKGIIIISSEMPELLGITDRILVMSNGQVAGIVDTKRTSQNEILRLASLHL >gi|316920349|gb|ADCU01000001.1| GENE 531 574408 - 575418 1053 336 aa, chain + ## HITS:1 COG:YPO1509 KEGG:ns NR:ns ## COG: YPO1509 COG4211 # Protein_GI_number: 16121782 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type glucose/galactose transport system, permease component # Organism: Yersinia pestis # 1 336 1 336 336 470 91.0 1e-132 MSVLNKKSLFTYFKEGGIYVVLLVLLAIIIFQDPTFLSLMNLSNILTQSSVRIIIALGVA GLIVTQGTDLSAGRQVGLAAVIAATLLQSMDNVNKVFPNIDTVPIPVVILIVCAVGAVIG LVNGLIIAYLNVTPFITTLGTMIIVYGINSLYYDYVGASPVAGFAPNFSNFAQGFLRFGD FKLSYITFYALIAVVFVWILWNKTRFGKNIFAIGGNPEAAKVSGVNVPLNLIMVYALSGV FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVIN YGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYAKKK >gi|316920349|gb|ADCU01000001.1| GENE 532 575712 - 576458 629 248 aa, chain - ## HITS:1 COG:YPO1510 KEGG:ns NR:ns ## COG: YPO1510 COG2949 # Protein_GI_number: 16121783 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Yersinia pestis # 1 245 1 245 245 384 76.0 1e-107 MWRRLIYGILTVAILLAVTAIGLDRWISWKTAPYIYEEVQDLPHRQVGVVLGTAKYVSTG TINQYYRYRIQGALNAYNSNKVNYLLLSGDNALESYNEPVTMRRDLITAGVPSGDIVLDY AGFRTLDSIVRTRKVFDTNDFTIITQRFHCERALFIALHMGIQAQCLAVPSPKNMMMIRI REIGARLGALTDLYILKREPRFLGPMIPIPAVHKVPADAQSYPAVSPEQLQELEQVLQKE KNADKPAE >gi|316920349|gb|ADCU01000001.1| GENE 533 576637 - 578334 1416 565 aa, chain - ## HITS:1 COG:YPO1511 KEGG:ns NR:ns ## COG: YPO1511 COG0281 # Protein_GI_number: 16121784 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Yersinia pestis # 1 565 1 565 565 1040 89.0 0 MELEYESKRPLYIPYAGPILLEFPLLNKGSAFSEEERSNFNLHGLLPEAVETIEEQTERA YRQYLDFKTDNDKHIYLRNIQDTNETLFYRMLDAHLSEMMPIIYTPTVGEACEHFSDIYR RARGLFISYPNRDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYT ACGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRISGDEYYAFVDEFIQAVKRRWPN VLLQFEDFAQKNATPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASRAAGSQLRDQTITF LGAGSAGCGIAEQIIAQMKSEGLSDDEARSRVFMVDRFGLLTDKLPNLLEFQSKLVQKSA SLAGWNVESDAISLLEVVRNAKPTVLIGVSGQPGLFTEEIIREMHSHCARPIVMPLSNPT SRVEARPEDIINWTDGAALVATGSPFGPVSYKEQLFPIAQCNNSYIFPGIGLGVLASGAK RVTDGMLMAASRALADCSPLALEGKGALLPDIKDIQQVSRSIAFQVAKEAQLQGVAVLTS DEALLQAIESNFWQPQYRIYKRTSF >gi|316920349|gb|ADCU01000001.1| GENE 534 578549 - 579433 831 294 aa, chain - ## HITS:1 COG:YPO1512 KEGG:ns NR:ns ## COG: YPO1512 COG0295 # Protein_GI_number: 16121785 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Yersinia pestis # 1 290 1 290 294 375 67.0 1e-104 MHARYDAAFSQLPAALQAALSPILNHADFHAVITASQVETLKQATGMNDSELAFALLPLA AACSLAPISKFYVGAVARGVSGNLYFGANMEFLGAPMQQTIHAEQCAVTHAWLRGEKALA SITVNYTPCGHCRQFMNELNTGTQLAIHLPGRQPATLGHYLPDAFGPRDLDIKTLLMDEE DHNLSLASDDVLAQAALDAANRSHAPYSQAYSGVALEAADGNVYCGRYAENAAFNPSLPP LQAALILMNVSGKDVLQIRRAVLVETKSTMFSQWDATQATLNALGCTQVEHTQI >gi|316920349|gb|ADCU01000001.1| GENE 535 579634 - 580326 514 230 aa, chain - ## HITS:1 COG:YPO1513 KEGG:ns NR:ns ## COG: YPO1513 COG1346 # Protein_GI_number: 16121786 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Yersinia pestis # 1 229 2 230 231 321 80.0 9e-88 MAYIWWSLPLTLLVFFGARRFAQKLNMPLLNPLLVSMVIIIPLLLALNIPYEHYFAGSST LNSLLQPAVVALAFPLYEQIHQIRARWKSIITICFIGSVTAMVSGTVIALWMGATPQIAA SILPKSVTTPIAMAVAQSIGGIPAISAVCVIFVGIVGAVFGHMLLNLMRISTKASRGLAM GTASHALGTARCAEMDFQEGAFSSLALVICGIITSLLAPFLFPILIHLFS >gi|316920349|gb|ADCU01000001.1| GENE 536 580326 - 580733 280 135 aa, chain - ## HITS:1 COG:YPO1514 KEGG:ns NR:ns ## COG: YPO1514 COG1380 # Protein_GI_number: 16121787 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Yersinia pestis # 1 135 1 135 135 171 68.0 4e-43 MSKAISVCWQYLRAFILIYLCLFAGNAISTLLPITIPGSIIGMLILFALLASQIMPAKWV KPGCNILIRYMALLFVPIGVGVMQYYDVVVKQFGPIVVSCLISTLVIMVVVAYSSHMVHR ERIIGETTDGCEEEK >gi|316920349|gb|ADCU01000001.1| GENE 537 580870 - 582087 806 405 aa, chain - ## HITS:1 COG:YPO1515 KEGG:ns NR:ns ## COG: YPO1515 COG0477 # Protein_GI_number: 16121788 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 3 396 1 392 393 435 61.0 1e-122 MRLKGFPPLITLLLISSLVLTIGRAITLPFITIYMTEHFHLKPESVGLILGISLAIGIVS SFYGGYLVDKFNKHHLMILSIALFAMTFCIMPWLGNVWWMVPVLALLHAAYSVFSIAIKA CFAEWLPVSERIRGFSMNYTLVNVGWAVGPALGVFAASYYPMLPFFLSGMLAFFVGLTLW LRLDGYGLPPNNGDTVFTEQRLNFSATFKILSHDRRLIFFTLGSTMGAVVAGQFTGYLSQ YLITVSNAQFAYQVIGSVMTVNASVVICLQYLLSRNMNNKNLLRWLTAGTLFFCFGLVGF ALADRSIPMWMVAMAIFTLGEVIVIPVEYLFIDFIAPPHLKGSYYGVQNLGNLGGAVNPI LCGFLLSFAPPTTLFYVLVAVSLLGLGFFWYGYRLSGASVQHIEG >gi|316920349|gb|ADCU01000001.1| GENE 538 582345 - 582602 99 85 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQLIYNYNEYYEWISKAFYYESRYDPTPLIDESEMLDFCNKSQPESYPCLVYLTVSTALA PFPTIKFIYKNQVNEWSQQFLVASK >gi|316920349|gb|ADCU01000001.1| GENE 539 582874 - 584154 1194 426 aa, chain - ## HITS:1 COG:ordL KEGG:ns NR:ns ## COG: ordL COG0665 # Protein_GI_number: 16129262 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli K12 # 1 426 1 426 426 735 80.0 0 MTEHVNSYYAASANSHAPYPQLTESVQCDVCIIGGGYTGLSSALHLVEAGYDVVLLESAR IGFGASGRNGGQLVNSYSRDIDVIEQRYGMDTARMLGSMMFEGAEIIRQRIKRYAIDCDY QPGGIFVALNNKQYHTLIEQKAHWERYGNTQLELLNSDRVREEIASDRYVGGLLDHSGGH IHPLNLALGEAEAIRLQGGRIFEQSAVVKINHGTPATVITEKGQVQAKYVIVAGNAYLGN KVEPELARRSMPCGTQIVTTEPLQPEVAASLLPKNYCVEDCNYLLDYYRLTGDNRLLYGG GVVYGARDPDDIDNLIVPKLLKTFPQLKGVKIDYRWTGNFLLTLSRMPQFGRLENNIYYM QGYSGHGVTCTHLAGKLISEVLRGDAERFDAFAKLPHLPFFGGRNLQIPFTAIGAAYYTI RDRLGV >gi|316920349|gb|ADCU01000001.1| GENE 540 584160 - 585656 1226 498 aa, chain - ## HITS:1 COG:aldH KEGG:ns NR:ns ## COG: aldH COG1012 # Protein_GI_number: 16129261 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 498 1 494 495 742 73.0 0 MDFHNLQYWQQRAKALEIENRLFINGRYQQAADGAQFSVEDPAGQRELVRVAQGNEHDVN QAVSAARDVFERGDWSRATPAKRKSILMKLADLMEQHHEELALLETLDTGKPIRHSLRDD IPGAIRSLRWYAEAIDKVYGEIAPTSQDALALIEREPVGVVAAIVPWNFPLLLACWKLGP ALAVGNSVILKPSEKSPLTALRIAGLAKEAGLPDGVLSVISGFGQDAGQALSRHPDVDVL TFTGSTRTAKQLLKDAGDSNMKRVWLEAGGKSANIIFADCPDLSKAAANAAAGIFYNQGQ VCIAGTRLLVEESIKEEFLAALCDQAAAYRPGNPLDPESVMGTLIDAEHGSKVQEYIQQG IAEGATLYLDGRDHAQGDHGSYLGPTIFTDVSNHMRIAREEIFGPVLAVSTFTTEQQALE LANDSDYGLGAAIWTRDLSKAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKS LHALEKFTELKTIWISLE >gi|316920349|gb|ADCU01000001.1| GENE 541 585749 - 586306 538 185 aa, chain - ## HITS:1 COG:ECs1876 KEGG:ns NR:ns ## COG: ECs1876 COG1396 # Protein_GI_number: 15831130 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 185 1 185 185 310 89.0 1e-84 MSDVSLAPGKRLSHIRQQLGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG LSLSEFFAEQEKPDEPQVVINAEDLIEIGSQGVSMKLIHNGNPNRTLAMMIETYEPGTTT GERIKHQGEEIGTLLEGEVMLTINGQVYHLEAGQSYAINTGIPHSFSNTSARICRIISAH TPTTF >gi|316920349|gb|ADCU01000001.1| GENE 542 586319 - 587047 515 242 aa, chain - ## HITS:1 COG:ycjL KEGG:ns NR:ns ## COG: ycjL COG2071 # Protein_GI_number: 16129259 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Escherichia coli K12 # 1 233 23 255 258 379 80.0 1e-105 MHGHLTQTLQEKYLNAVLNAGGVPVALPHALAEPELLETLLPHLDGIMLPGSPSNVQPHL YGENGDEPDADPGRDSLSLALISIALERRIPLFAICRGLQEMVVATGGTLYRRLYEQPEL LEHREDPELPLEQQYAPSHEVLVQDGGLLSKLVPGCNKFWVNSLHGQGAKTLGPLLRVEA KASDGLVEAVSVHDHPFALGVQWHPEWNSDEYALSRLLFEGFITACQKASAEKNSQPDKN YQ >gi|316920349|gb|ADCU01000001.1| GENE 543 587318 - 588736 1243 472 aa, chain + ## HITS:1 COG:ECs1874 KEGG:ns NR:ns ## COG: ECs1874 COG0174 # Protein_GI_number: 15831128 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Escherichia coli O157:H7 # 1 472 27 498 498 840 84.0 0 MQTNIVEVENFVQHSEERRSSAFQREVKNYLERYPSTQHVDVLLTDLNGCFRGKRIPVAG LKKLEKGCYFPASVFAMDILGNVVEEAGLGQELGEPDRTCVPVLGSLTPSAADPEFIGQV LLTMLDEDGTPFDVEPRNVLNNVWQQLRQRGLFPVVAVELEFYLIDRQRDAEGYLQPPCA PGTQERNTQSQVYSVDNLNHFADVLSDIDELAKLQQIPADGAVAEASPGQFEVNLNHTDN VLQACDHALSLKRLVRMVAENHDMHATFMAKPYEEHAGSGMHIHISMLDNKGQNVFADDD GEDSLLLKKALAGMMALMPASMALLAPNVNAFRRFQPGMYVPTQASWGHNNRTVALRIPC GDRDSHRVEYRVAGADANPYLVMATVLAGILHGLDNDLTLAEPITGNGIEQEGLPFPIRQ SDALYEFEEQQALRSLLGERFSHVYHACKTDELIQFERMVTDTEIDWMLKNA >gi|316920349|gb|ADCU01000001.1| GENE 544 588968 - 590290 1349 440 aa, chain + ## HITS:1 COG:RSc0029 KEGG:ns NR:ns ## COG: RSc0029 COG0160 # Protein_GI_number: 17544748 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Ralstonia solanacearum # 13 430 9 424 426 455 56.0 1e-128 MSENHNLSGNGTNQSWQTRREEAVAGGVSTLLPAFIQKARNAELWDIEGNRYIDFAAGIA VLNTGHNHPKVIAAVQEQLTRFTHPCFQVTPYPEYVELAERLNALVPIKEATQTLLLTTG AEAVENAVKVARIATGRGGVIAFRGGFHGRTLMGMALTGKVAPYKQGYGPFPSGIYHAPY PAPYLGITEQHALDALDAIFAADIAPTEVAAIIIEPVQGEGGFYAAPAGFLKSLREICDR HGIVLIADEIQSGFCRTGKTFAIEHTGVEPDLVTMAKSLAGGFPLSALVGKKRLMEKALP GGLGGTYAGSPVAIAAALAVTDLIKDEQLNQKAQQVGEQITRELHALAERFDCIGDIRAV GAMVAMELVENRDATKPNKALTSALVKEAGKQGLILLSCGVRGNVIRFLAPLTAEKEVIK EGMEKLATALSVVAKKVQNA >gi|316920349|gb|ADCU01000001.1| GENE 545 590556 - 590774 111 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVHVYVYPPRLGERLSRSEYGPAHCFSGALLNEQTYICSRLSRRLIRRFPAASLNDVNLL PAEDKGGNRHGD >gi|316920349|gb|ADCU01000001.1| GENE 546 590764 - 592152 1258 462 aa, chain + ## HITS:1 COG:ycjJ KEGG:ns NR:ns ## COG: ycjJ COG0531 # Protein_GI_number: 16129257 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 452 19 467 479 722 83.0 0 MAIRTPSVSQATAHEAGKPQLRKSLKLWQIVMMGLAYLTPMTVFDTFGIVSGISNGHVPM SYLFALAGVLFTAISYGKLVRQFPTAGSAYTYAQKAINPHVGFLVGWSSLLDYLFLPMIN VLLAKIYLSAMFPEVPPWIWVVGFVAIMTAANLKSVSLVANFNTIFVLVQVAIILVFIFL VVQGLHKGEGVGKVWSLQPFVSENAHLLPIITGATIVCFSFLGFDAVTTLSEETKDAAKT IPRAIFLTALYGGIIFISVSFFIQLFFPDITRFKQPDEALPEIALYVGGKLFQSIFLCTT FVNTLASGLASHASVSRLLYVMGRDNVFPEKIFGYVHPKWRTPALNVIMVGLVALSAISF DLVTATALINFGALVAFTFVNLSVISHFYIREGRNKTWKDRFHFLVLPMIGALTVAVLWL NLEKSSLTMGLIWAALGFGYLVYLTRRFRKPPPQFESQPQAE >gi|316920349|gb|ADCU01000001.1| GENE 547 592252 - 593178 602 308 aa, chain - ## HITS:1 COG:STM2986 KEGG:ns NR:ns ## COG: STM2986 COG2962 # Protein_GI_number: 16766290 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Salmonella typhimurium LT2 # 9 289 2 278 295 275 55.0 8e-74 MWLKNGPALAVLAFILWGITPLFYKMLPDANALELLAQRLFWSIPLLLLLRLLFKNRTTW KQVWQDKRSLFCCLLGGAIMSVSWTTFIYALTHNLVLDASLGYFTNPLFSIALGVIFLHD KLSRFQRIAVALAITGLAYQIVLLGHIPILALAMGSTFAFYGLVRKFIRYDIMTALTLET LWMLPLAIAITIWLHMTGSSILAGSGTKTFVLYALTAPVTFAPLLLFAAAIKRTSLTVIG LAQYVEPSLQFLLAVLAFGEPISMPKMISFSLIWLGLAFCVYELFRQHWRYRHLATDMVR GKRNHPGH >gi|316920349|gb|ADCU01000001.1| GENE 548 593308 - 594732 1129 474 aa, chain - ## HITS:1 COG:YPO1558 KEGG:ns NR:ns ## COG: YPO1558 COG2925 # Protein_GI_number: 16121829 # Func_class: L Replication, recombination and repair # Function: Exonuclease I # Organism: Yersinia pestis # 6 474 8 476 476 755 76.0 0 MSKAAPTFLIHDYETFGQHPALDRPAQFAGVRTDADFNIIEEPLVIYCRPSDDYLPQPEA VMITGITPQVALTRGVSEAEFSRQINQIFSVPGTCIMGYNNIRFDDEVSRNIFYRNFYDP YAYSWQNGNSRWDLLDVLRTCYALRPEGINWPENEEGLPSFKLEHLSKANGIEHENAHDA MADVYATIALAKLVKQAQPKLFDYLFQLRNKHKVSALLDIANMKPLVHISGMFGALRGNT SLVAPLAWHPDNKNAVIMCDLAGDMSPLLELDTDALRERLYTRRSELRSDQPPAPLKLVH INKCPVLAPDQTLRPENAERLGLDRQRCMDNLQLLRNHPELRDKVVAVFAEAEPFKASDD VDAQLYDGFFSDADRSAMQIIRETLPQNLPALDLTFNDKRVLPLLFRYRARNFPTTLTDD EQRRWQLHRQAVLTPERLQAYIHQLEELYNRHEDEPEKLAQLKELFEYARQLVN >gi|316920349|gb|ADCU01000001.1| GENE 549 594945 - 596003 636 352 aa, chain + ## HITS:1 COG:STM2060 KEGG:ns NR:ns ## COG: STM2060 COG1289 # Protein_GI_number: 16765390 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 352 1 352 352 396 55.0 1e-110 MRLNRAISPLEHVIYGHYKVVHGVRMALAFVLTFLAIRLLHVPEATWPLITMVVVMGPIS FWGNVLTRALQRIMGTVFGATSGLIALYIEIYSLPLMLVWCALVMFVCGVLALGKRPYMG LLIGITLAVVCGAGPGDMNTALWRSGDVIIGSLLALFFTSIYTQRAFVHWRLMMSKELKN MSDFYSAHMSPNILERPHLSAKHQQILNELVKVRTLISPCVRETRINKDVFDAIQVMSRN LVSTLELLTDAYWATRESHFIMLNATTLRVFQKLSINTLNALSSALLSGNIDDDLSDLPE MGAVSVELKHLMENAKAAENIEAPIYGYVWLNLELAKQLDELRDLVSMALTK >gi|316920349|gb|ADCU01000001.1| GENE 550 596456 - 597031 578 191 aa, chain + ## HITS:1 COG:ygiL KEGG:ns NR:ns ## COG: ygiL COG3539 # Protein_GI_number: 16130939 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 2 191 4 183 183 172 55.0 2e-43 MFKKTLLAGITGVVLSGVVFNASAAGEANQGSGKITFTGEVIEAPCSIKPGDEDLKVNLG EVATNVLNSTQQSLAEDFTIHLQDCILTDSKGVVVTDKVKITFTSPNTDTTDTSLMANTL QGNIGAASNVGVRILDSGNNKLTLGSAVTVTFPDSSSYQELNFKARMEKIGTTTVTPGNV QAQANYMLDYK >gi|316920349|gb|ADCU01000001.1| GENE 551 597235 - 599634 1520 799 aa, chain + ## HITS:1 COG:yqiG KEGG:ns NR:ns ## COG: yqiG COG3188 # Protein_GI_number: 16130942 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 795 28 817 821 886 54.0 0 MDVDDRDNIDLSQFEKKGQIPAGQYIVQVSINKNVLPKTWTLEWLAADNESGTQLCLTAE HLQQLGFDETFIKQLHEWNQQKCLDVTRKPELSVKLDKANMLLNLTAPQLWMKYQAKNWT PPEYWDDGIAGALLDYNVYASQYEPHDGDSTQNMSSYGTLGFNLGAWRFRSDYQYSEDFI NGKSSGSEATLSRTYLFRPIPAISSKFTAGQYDLDSDIFDTFHFTGASLESDEHMLPPDL QGYAPQITGIAQTNAKVTVEQNGRVLYQTTVSPGPFTISDLGNTLQGQMDVTVEEEDGRK STFQVGSASVPFLTRKGQVRYKASVGKPTTTSHNDVNNPLFLTSEFSWGWLGNTSLYGGA ILTADDYQSISSGIGFNLNELGSISFDITRSEAELGYSETPQERKGGYSYRVNYAKRFES TGSQVTFAGYRFSDKEYVTMNEYLNSQDGDENTDDEKESYILSFNQTIESFGVNAYFNIS RDTYWNSNSDTRYSLSLSRNFELGDIKGISASLSLTRTRWDGENENQYYLSFSVPLGLGS SMSYNVQRYGDKTAQSVSYYDSSDKNNTWNVSTSADNDQIRDGKPALRGGYQHYSPYGRF NLAASVQPNTYNSLNVGWNGSATATRYGAALHDYTSGNNARMMVDTDGIAGVALNRSRTV TNGYGIGVIPSISNYQTATLQVNSNDLPEGVDVSNSVIRTTLTEGAIGYTALSATKGYQI VGVIRLADGRFPPLGVTVVDAKTNKDVGLVAEEGFVYLSGIQEGSMLRVAWSSNICEITP PNQSNISEAAIILPCKTVH >gi|316920349|gb|ADCU01000001.1| GENE 552 599650 - 600384 439 244 aa, chain + ## HITS:1 COG:yqiH KEGG:ns NR:ns ## COG: yqiH COG3121 # Protein_GI_number: 16130943 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 16 236 22 243 252 256 51.0 3e-68 MKVSYSLVSLIWLLGVSSMINAAVLPDRTRLVLNETDKSVSVRLTNKSETLPYLAQSWIE DSEGKKTRNFISPLPPLLRLDPREQSQVRLMALPPLATLPKDRESLFYYNVREVPPRMED KNAMQIAMQSRLKLFWRPKAIVLKAGAVMTWDKVDISQTANGINFKNNTPYYVTVGYIGL DGKTLIAGGNSIMVAPFDQETMTVKNLPSRFQIGYVGDYGGLTLYKISCNSVQSVCQNTA VLKE >gi|316920349|gb|ADCU01000001.1| GENE 553 600387 - 601436 457 349 aa, chain + ## HITS:1 COG:no KEGG:LF82_p512 NR:ns ## KEGG: LF82_p512 # Name: not_defined # Def: Yqi fimbrial adhesin # Organism: E.coli_LF82 # Pathway: not_defined # 1 349 1 349 349 405 56.0 1e-111 MRNLLFLLALVSVFSSSSAWALDCYKDNHGGPIRFSAMLPSFIIPENALLGSKVWESGDV NLTVYCDNSADWTQHAPTETVHAWIKLPEINSSDVIDNPYFTFGVTYEGVDYETTGFGID TGKCLDKSSSGNYAGHTPVCNGVDYQKNISFNARFRLYMKLKAIPATSDTVYDFGSINVL QFDGSGGANLQSNAKNLRFNIDGLSNVRFLDCSVDIKVFPESQVVSFKQIDNSSIRTSPA TEPFSISTIKDMSAGCTQQFDVQTSFYTDDVLYDATHLDMDNGLLLKIIDEEDHAAIEYN QYKAFTTYIPGQGSDTITHEYTAELTKNPTKEVSIGPFSKDLIIKLNYH >gi|316920349|gb|ADCU01000001.1| GENE 554 601478 - 602530 1017 350 aa, chain - ## HITS:1 COG:YPO2645 KEGG:ns NR:ns ## COG: YPO2645 COG2113 # Protein_GI_number: 16122854 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Yersinia pestis # 20 348 5 330 334 497 75.0 1e-140 MTEQTKQHKQTQQRIASMLAITALAFGTLSTTFSTQAAELPGKGVSVQPIQSSIAEETFQ TQLVSKALTKLGYDVQPTKEVDYNVAYTSVAAGDATFLAVNWDQLHSDMYNGAGGDKKFY REGQYVTGAAQGYLIDKKTADQYHITNIEQLKDPKIAKLFDTNNDGKADLAGCTPGWGCE ASINYQLKAYGLNDTVEHNQGNYSALIADTMTRFKEGKPVFYYTWTPYWVSDVLKPGRDV VWLQVPFSALPGSLKDVDTKLPNGANYGFPVNNMQIVANKTFAEKNPAAAKLFAEMKLPI ADVNAQNLRMHQGENSEADIERHVNGWIKAHQATFDGWVDAAKKAADTAK >gi|316920349|gb|ADCU01000001.1| GENE 555 602670 - 603776 1003 368 aa, chain - ## HITS:1 COG:YPO2646 KEGG:ns NR:ns ## COG: YPO2646 COG4176 # Protein_GI_number: 16122855 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, permease component # Organism: Yersinia pestis # 6 364 13 384 388 513 77.0 1e-145 MSDATSNPWATEPAESAASNATSASQGADAWSSSPATTDAASNHAAQSSDWLSSAPTPEA EHFNLMDPFHHTWVPFDSWVTHGIDWLVSHGRPVFQGIRMPVDFVLSGFQNILQGMPAPI AILVFALIAWQCAGLGMGAATLIGLVAIGAIGAWSQAMVTLALVLTSLFFCMLIGLPLGI WLARSKGAARVIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIVRLTSL GIQQVPADLIEAAESFGSSPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVG GLGQMVLRGIGRLDMGLASIGGVGIVILAIILDRLTQSVGRDRRSRGMQGWYMSGPIGLV ARLFIKRG >gi|316920349|gb|ADCU01000001.1| GENE 556 603773 - 604972 869 399 aa, chain - ## HITS:1 COG:YPO2647 KEGG:ns NR:ns ## COG: YPO2647 COG4175 # Protein_GI_number: 16122856 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, ATPase component # Organism: Yersinia pestis # 1 399 1 399 399 635 79.0 0 MTIKIEIKNLYKVFGEHPERAFKLIESGLHKDQIFEKTGLTVGVKNASLAIEEGEIFVIM GLSGSGKSTMVRLLNRLIKPTRGQVMIDGEDIARVSEEKLRNIRRSKISMVFQSFALMPH LNVLDNTAFGLELSGVPQAERHQKALEALRQVGLESHAHSYPDELSGGMRQRVGLARAMA INPDILLMDEAFSALDPLIRTEMQDELIRLQSQQQRTIVFISHDLDEAMRIGDRIAIMQG GEVIQVGTPEEILNNPANDYVKTFFKGVDISQVFSAKDIARRRHLSLIRKTPGFGPRSAL KLLQDEDHDYGYVVERGQKYIGIVSVESLKQALSQGQSLDSALLSAPEAVDADTSLNELI SLVAQSPCGVPVTSADGIFIGIINKGTLLQALDKEGPNQ >gi|316920349|gb|ADCU01000001.1| GENE 557 605428 - 607617 1252 729 aa, chain + ## HITS:1 COG:YPO1206 KEGG:ns NR:ns ## COG: YPO1206 COG1199 # Protein_GI_number: 16121497 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Yersinia pestis # 1 724 1 724 726 1058 71.0 0 MALSSATKNQITQWYKALSDHIPDFIPRPQQRTMIAEVAKTLAGDDARHLVIEAPTGVGK TLSYLIPGIAISRDQEKPLVVSTANVALQDQIYSKDLPLLRKIIPDLKFTAAFGRGRYIC PRNLAAMASAEGMQGDLKLFIEDDLQPSTAEEKVLCQKLSKQLAGYRWDGLRDHLDENID DKLWGKLSTDRANCLARNCMYFRECPFFIARREIESADVVVANHALVMAALENESVLPNA KDLLLVLDEGHHLPDVARDALEIDGEITAIFVNSQIEGIARHIEQCGAQYSPKNRPKLMD SERLKAHCEEMRQLTTDFDRMASSLLPVGSSDPNYRFEMGILPEPMVDIAVRLYKLTDGL RGLAEFMMNDLQEKTGSHDIMRLHKAILQMSRSFSYLEAMTKLWRLTAMDKASNAPISKW LTRDVFDNVQHIYLHCVGIRVCDQLEKMLWRKIPHAIVTSATLRSLNSFSRISELSGLNE KAGDRFVALDSPFNHPEQGRLVIPQMTLEPAMAQEAEHLRQMAHFFRHEWENGKHTGMLV LFASQRAMQTFLSFLPALRLGLLVQGDQPRYRLVEEHCRRVRKGQQSALVGLQSFAEGLD LKGELLTQVHIHKVAFPPIDSPVILTEGEWLKTLKRYPFEVQSLPGASFTLIQQVGRLIR SHECKGEIIIYDRRLLSKSYGARLLGALPVFPIEQRAMPEGDLPALPKSESSKKTSNATR AKRNARRRG >gi|316920349|gb|ADCU01000001.1| GENE 558 607708 - 608622 559 304 aa, chain + ## HITS:1 COG:ECs0878 KEGG:ns NR:ns ## COG: ECs0878 COG0547 # Protein_GI_number: 15830132 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 1 298 1 300 320 322 54.0 8e-88 MDYAQIIKEVGRGKNHARDISQEQAEALFDAMLAGKIPELELGGVLIGLRIKGEAEQEML GFYRSMQKWAPKLELPKGMPMPVVIPSYNGARKQANLTPLLAMLLAREGVPVLVHGVSED PSRVTSAEIFRGLGITATQNLQNIDWHMGKPIFIGVEHLSPEMYQILSLRWRMGVRNSAH TLIKMINPFAGDVLRIASVSHPEYIQRMSGLFNQTNSTALLLHGTEGEAYANPLRCPQMH LCRNGNISIVVTREMGEGDAPELAEAKSIESTVNWTQRCLRGEITVPRSIQLQVEACLRV ISVS >gi|316920349|gb|ADCU01000001.1| GENE 559 608959 - 610110 842 383 aa, chain + ## HITS:1 COG:YPO3096 KEGG:ns NR:ns ## COG: YPO3096 COG3765 # Protein_GI_number: 16123270 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Yersinia pestis # 16 371 15 370 383 300 47.0 3e-81 MATIHHTDIDPVLKRPDNDFPAHFQRNDEIDLIEWFLIVLKSIKTVVIITLCFALLGYGV AKILPQKWTSDAVIIPPQGEELTSLDALKPQLSVLGIDFNVGEKELLSLFVRDFDSQILR REYLVKTDFYKRLIENVDPNDELAKRRILDGLATKAFASFSSELSKTPSETAYSYYKLSF TADTSEDAQKTLQGYISVVNASVEKFIASKIQRQIDLSLSSEEAKYEMALSRLKNAQEVS INRLGYSLSIADAAGVKRPLYSNGTAIKDDPDFSIALGSDGLKRKLEIEKSISDLAQLNS GLQDSKLIINKLRELKLADVNFTAYKYLMMPNEPVKKDSPKTALIVLLATLLGLIASVGL VTVRHVVKSHRGGQAVRMKEINS >gi|316920349|gb|ADCU01000001.1| GENE 560 610178 - 611578 1052 466 aa, chain - ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 466 1 466 470 759 87.0 0 MVDQIKIEATSPAKGEEHLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVY MIIGFMLFFVMRAMGELLLSNLEYKSFSDFAADLLGPWAGYFTGWTYWFCWVVTGIADVV AITAYAQFWFPGLSDWVASLAVVLLLLGLNLATVKMFGEMEFWFAMIKIVAIVALILIGL GMVLMHFESPTGSVASFSNLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKD PEKSLPRAINSIPIRIIMFYVFALIMIMSVTPWSSVVPDKSPFVELFVLAGLPAAASIIN FVVLTSAASSANSGVFSTSRMLYGLAQDGVAPKRFALLSKRAVPSSGLTFSCICLLGGVV LIYLIPNVVTVFTMVTTVSAILFMFVWSIILCSYMVYRKQRPHLHEKSIYKMPLGKLMCW VCLAFFVFVIVLLTLEADTRQALMVTPLWFIILGMGWMFIRKRRGA >gi|316920349|gb|ADCU01000001.1| GENE 561 612019 - 612603 437 194 aa, chain - ## HITS:1 COG:YPO1275 KEGG:ns NR:ns ## COG: YPO1275 COG0791 # Protein_GI_number: 16121560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Yersinia pestis # 1 188 1 188 194 300 80.0 2e-81 MVKSQPILRYILRLAPAIAAAVLLSACSANHSSSDRYAQTDTHAVKDKDGLLLQASQDEF EAMVRNVDIKSKIMDQYATWKGVRYRLGGDSKRGIDCSAFVQRTFREQFGLDLPRSTSEQ QDTGRQIQRTKLRIGDLVLFRAGSTGRHVGIYLGNDQFVHASTSSGVTISSLNDSYWKGR YREARRVLTNPAHS >gi|316920349|gb|ADCU01000001.1| GENE 562 613007 - 613708 394 233 aa, chain - ## HITS:1 COG:YPO1276 KEGG:ns NR:ns ## COG: YPO1276 COG0671 # Protein_GI_number: 16121561 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Yersinia pestis # 1 233 1 233 233 283 67.0 3e-76 MARRNLPWIILFNILGIALFLSWYLPTNHGFWFPIDSSIFFFFNEYLATNRTFLYLVAYT NNRAFDAIALLSMGLLYLSFFVKRDGYGKRRMLILGVVILFTAVILNQLGHLLPVQRASP THFFENINRVGELTGINTKDSSRDSFPGDHGMMLIIFAVFMLRYFTVRSFIIALGIFVIF ILPRIMIGAHWFSDIAVGSLSVVLVGLSWWLLTPASDALLNLLDKHLPGKYRP >gi|316920349|gb|ADCU01000001.1| GENE 563 613744 - 614730 650 328 aa, chain - ## HITS:1 COG:YPO1277 KEGG:ns NR:ns ## COG: YPO1277 COG0523 # Protein_GI_number: 16121562 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Yersinia pestis # 1 325 1 324 327 473 69.0 1e-133 MTKVNLITGFLGSGKTTTLRHLLANKPENEKWAVLVNEFGEIGIDGSLLADTGAVLKEIP GGCMCCVNGLPMQVGLNMLLQQAKPDRLLIEPTGLGHPKQILNLLMSDVYQAWLELNATL CILDARQLSDEKYTGNENFRDQLAAADIIVANKQDVYSDHDREQLARWVQESGKGRKIVT AEQGQIEVALLNSARENLAELPNAKHHHHSKAPSSGIAALRLPDGQNWRRSLNQGQGYFS CGWVFSAETIFDTVAVLEWVRLAPVIRVKGTLRIPEGTLIVNRQGDDFHIETRQGSPLDS RVELIHDAETDWNTLQSALLKARIKAIS >gi|316920349|gb|ADCU01000001.1| GENE 564 615093 - 615422 174 109 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_2585 NR:ns ## KEGG: NT01EI_2585 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 3 108 1 107 108 78 35.0 8e-14 MAMKISRLSMFFAVGLGLPLFVSVVTPVHAVSTGVIHFVGVIVEDGCDVALEKNHVKTRC ERNGKEESLSRPISQISTRPSELPVSVGTSQLKWINESHTLGVLTINYH >gi|316920349|gb|ADCU01000001.1| GENE 565 615640 - 616383 596 247 aa, chain + ## HITS:1 COG:YPO1279 KEGG:ns NR:ns ## COG: YPO1279 COG2186 # Protein_GI_number: 16121564 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 242 20 261 266 347 73.0 9e-96 MRLYQEVGNTLRNLIAQGAYPIGERLPPERDIAEQFSVSRSVVREALIMLELEKLIDVRK GSGVYVVALPQSQRRAAVTDLDENTYGPFELLQARQLLESEIAAFAAVQATKADIMKMRK AIEQERQSLSLGTVDESADELFHCLLAQSTQNSVLASMVHDAWQARKHNPMWSGLHVHTS DFSYRWNWLDDHQKILHAVLRRDAKSAKQAMWQHLENVKTKLLEISDPEDPSFDGFLFES TPVLPNE >gi|316920349|gb|ADCU01000001.1| GENE 566 616567 - 618099 699 510 aa, chain + ## HITS:1 COG:PA3825_2 KEGG:ns NR:ns ## COG: PA3825_2 COG2200 # Protein_GI_number: 15599020 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Pseudomonas aeruginosa # 261 499 2 240 268 294 60.0 2e-79 MTQLFRTVNFRPVARLLVSLLVATLILIIAVMTISWQISRGMERDIAQRLQRAVAQFDAT LQNAEIAANAVRGYLGKECSTETQNALRYQVTVVPDIRTVNLATGNNVYCSSLAGKYSTA VNTPKYVGGMLLMLNGNPVTPNRSLIAFRKSYGEHSVLVGIDGYYLKNVLELLKSPTEIH LLVGTSWMDSSGHVSNDKFKPHGTSYFQTSKHFPYSVATEIPYSTHWEYVWEYSSGSIIL FPLLAILLGVITYRTMGRVNSPLSELRSALKNHEFIPYIQPVVSCENNDLTGCEVLMRWR HPQMGMIAPNQFIPLAEDSGLIVPMTRDLMAQVRDYFAPLAEQLPYNFHFGINISASHFK DLSLVDDCRLFINAFEGYKIQLVLELTERQLIVPSELTHRIFHELHGLGVRIALDDFGTG HSSLAYLREFQIDILKIDQSFIRMIGSDALSGHIVDNVIDLAKRLQLVTVAEGVETSEQA EHLKKYHIDYLQGYLFGRPEDQKTFSDKWL >gi|316920349|gb|ADCU01000001.1| GENE 567 618152 - 619618 1304 488 aa, chain - ## HITS:1 COG:YPO1280 KEGG:ns NR:ns ## COG: YPO1280 COG0246 # Protein_GI_number: 16121565 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Yersinia pestis # 1 488 1 488 490 740 71.0 0 MKNLANHSLPDGVKQPTYDRGALKSRIVHLGFGAFHRAHQALLTDRVLNQKGGDWGYCEV NLFGGEKLIEQLREQNHLYTVLEKGAEQNQAIVVGSVHESLHSDLDGIQAVIEKMAEPQV AIVSLTVTEKGYCIEPGSGKLDLNNALIKQDLAAPQAPTSAPGVIVEALRLRHERNLPPF TVLSCDNIPENGHVVKNAVLGLANARDQKLAAWIEANVTFPSTMVDRIVPAATEETLAEV AQAIGIEDPCGIACEPFIQWVVEDNFVAGRPEWEIAGAELVTDVLPYEEMKLRMLNGSHS FLAYLGYLAGYQHINDCMEDPAYRTAAHRLMLQEQAPTLRVTGVDLAQYADRLIERYSNP SLKHRTWQIAMDGTQKLPQRMLDSIRWHIAHDHAFPCLALGVAGWMRYVGGVDDHHQTID IRDPMLDTLKATVAASQEGEARVQALLGIKAVFGDELPKQSAFVQAVTKAYLALVENGAA NTCASLVK >gi|316920349|gb|ADCU01000001.1| GENE 568 620065 - 621255 1213 396 aa, chain + ## HITS:1 COG:YPO1283 KEGG:ns NR:ns ## COG: YPO1283 COG1312 # Protein_GI_number: 16121566 # Func_class: G Carbohydrate transport and metabolism # Function: D-mannonate dehydratase # Organism: Yersinia pestis # 1 396 1 396 397 737 86.0 0 MEQTWRWYGPNDPVSLDDIRQAGATGVVTALHHIPNGEVWTVEEIEKRKAILAAKGLTWS VVESVPVHEEIKTQTGNYQQHIDNYKLSLQNLAACGIDTVCYNFMPVLDWTRTDLEYELP DGSKALRFDQIAFAAFELHILKRPNATEDYTAEEQAQAKTYFDNMSEADIAKLTGNIIAG LPGAEEGYTLDQFRARLAEYDGIDKAKLREHMGYFLKEIVPVAEACGLKLAVHPDDPPRP ILGLPRIVSTIEDMQWLKDTVDSIYNGFTMCTGSYGVRGDNDLVKMIETFGDRIHFTHLR STCREQNPKTFHEGAHLQGDVDMYAVVKAILTEEQRRQKAGNMRPIPMRPDHGHQMLDDL KKKTNPGYSAIGRLKGLAEVRGVELALKRALFPEMK >gi|316920349|gb|ADCU01000001.1| GENE 569 621322 - 621894 620 190 aa, chain - ## HITS:1 COG:ECs3063 KEGG:ns NR:ns ## COG: ECs3063 COG0231 # Protein_GI_number: 15832317 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Escherichia coli O157:H7 # 1 190 86 275 275 321 80.0 5e-88 MPRANEIKRGMAVTLNGKLLLVRDIDVQSPSARGASTLYKMRFSDIRTGLKVEERFKGDD ILEEISLSRRQVNFSYIDGDEYVFMDNEDYTPYTFKKDQIEEELLFIPEGGMPGIQVLTM DGQVLALELPQTVDMEIVETSPSIKGGSASARTKPAVMSTGLTIQVPEYLSSGEKIRIHI EERRFMGRAD >gi|316920349|gb|ADCU01000001.1| GENE 570 622052 - 623302 1205 416 aa, chain - ## HITS:1 COG:YPO1285 KEGG:ns NR:ns ## COG: YPO1285 COG0814 # Protein_GI_number: 16121568 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Yersinia pestis # 3 416 1 414 414 592 78.0 1e-169 MTMENTLTQTIRRPSVLGGAMIIAGTAVGAGMFSIPVVTAGVWFTGSVLLLIYTWACMYI SGLMILEANLNYPAGASFHTMVGDLLGKGWNSLNGLSITFVLYILTYAYISAGGSIITHT LEPYFGVGQTAAGLVFAIIVAFIVWLSTRAVDRLSTILIGGMVITFLLSTGDMFTHVNAS VLFNSSDDKASYLPYALASLPYLLTSFGYHGNVPGLVKYYHKDAKSVVRSLFMGTLIALT IYIFWQYVIQGNITRAAFQQIISEGGNIGSLLKQMGNVASSNIVNQLLNAFSYMALASSF LGVSLGLFDFISDFFKFDDTRTGRTKAALVTFVPPTIGALAFPNGFLYAIGFAGLAATIW AVIVPAMMARASRKRFPKATYRAPGGSAMILFIIAFGLINAVAHILSLLNLLPVYQ >gi|316920349|gb|ADCU01000001.1| GENE 571 623349 - 623495 63 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVRSVCREVNSVIALEAKELAEYPVIPYERGSNLRHPNQSIAALARLE >gi|316920349|gb|ADCU01000001.1| GENE 572 623682 - 623945 97 87 aa, chain + ## HITS:1 COG:YPO1286 KEGG:ns NR:ns ## COG: YPO1286 COG0727 # Protein_GI_number: 16121569 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Yersinia pestis # 1 84 1 84 84 118 73.0 2e-27 MDCRSDCGACCIAPSISSPIPGMPQGKPANTRCIQLDDDMRCKIFLSPLRPKVCGGLQAA EDMCFGHRDQALIYLVKLEQETAPDII >gi|316920349|gb|ADCU01000001.1| GENE 573 623942 - 624277 62 111 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVILTFVSYFMKEPIYEGIFRQHARHISGRDFTGIGELGSCLLFSILIFIICYLPTRVVA AISTGITLFLALNNFNVEHPIREYSQIILFLFMLSLTYFLSSQDKYIRKAI >gi|316920349|gb|ADCU01000001.1| GENE 574 624541 - 627333 2118 930 aa, chain + ## HITS:1 COG:STM3773_2 KEGG:ns NR:ns ## COG: STM3773_2 COG3933 # Protein_GI_number: 16767057 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Salmonella typhimurium LT2 # 461 929 3 471 472 731 76.0 0 MKRIDKICQELERLTSSLSKSDLQKEVAFTAESIGINLGLARNSVSKDLNQLWNEQRVIK VKTRPVYFLHRQTIETLLDSPLPDHLSEVRFVSDLLPVEHQSTSNDPFAALIGFDRSLKL SVEKGKAAVLYPSGLHVLLTGPSGVGKTYFAELMHQFACQQSGNSTLPMVYFNCAEYAHN PELLSSHLFGHRQGAFTGANSDKVGLIEQADGGYLLLDEIHRLPYEGQEKLFALLDKGEF RALGSSHKAQTVNVRLICATTEPVNSTLLRTFQRRIQVSIDLPALRERSMEEQIELITGF LHQESRKISRTIRIDKALLLWLLEKPLEGNIGQLKSDIQFLCAQGWAAGMGQQNDVLTLD KKLVEQSVMPSADQRLLVDSIFGQQQWLDISSQTLSAFKPSLGVSAGHEDSDLFYRFLTR EYVNLRNSNVPPQETLAILKNKLRSIFEYGLYSRDTAVVGYSGQLEQRLSLLIGYVEQVV GFALPENMVNHLRKHFLTLLSYVQRGLIPQLYSSSLILDHCKNEYDNAMQLCRRIDEIFN IQCPATEVVYLCMFLKECRQYRCQIDDSPELGVIFVAHGATTATSMAQYVNQVLERDLFT AIDMPFEQSIHDTLEVLTNIIRSRGYRRLILMVDIGSLVHFGSTISKLFQFDVLLLPNMT LTSLLEIGLDLTYESSDFAALTALMNEKQIPCHWCSPEQAGAGKVLVVSCITGMGTAEKI HKVLSESFGELMAQDTRLLILDYNEVRSLERIQQALAPHERLVGIVGTFQPGLPDIPFIS LEEMFSEQGPELLLSLLNPDLSSMERRLEVERSSMRFISALTLESIINQISVLNPRRILQ EMEGVLQHICQISDLKPSRQVTLRFLIHCCCMVERIVISRKPLQMALNTPQDLDVNAMSV IKQAFLPIEEAYAIRLSDAEFIYIYELLYC >gi|316920349|gb|ADCU01000001.1| GENE 575 627562 - 627906 239 114 aa, chain + ## HITS:1 COG:STM3772 KEGG:ns NR:ns ## COG: STM3772 COG2893 # Protein_GI_number: 16767056 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 113 28 140 141 159 71.0 8e-40 MVAGDIQGVTEIALMPVDTFSDFFQRVEHAVSTMPAGSLILTDFIGGTTSNVAARLSVDY PIGVVAGLNASLLLQALELRENGPLTESIDELVEAGRESCRDVVAHINGLQNNA >gi|316920349|gb|ADCU01000001.1| GENE 576 627957 - 628442 564 161 aa, chain + ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 279 84.0 2e-75 MASIVLCRIDSRLIHGQVVTKWVGQSQANRIAVVSDELDADPFMKNIYLMAAPPSIKVDC YSNSSFAAAWKENQLGEGKVLVLFPSLVAVQGAVHQGFDVQSIQVGGLGGGPSRKAVFQN ITLDDKDVAILGDLKDHGIKVFFQTIPEDKPQSLEDILKKY >gi|316920349|gb|ADCU01000001.1| GENE 577 628486 - 629238 809 250 aa, chain + ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 1 249 1 249 249 403 89.0 1e-112 MDTLFIAISMGLYYWFARLRLGYTFSGMLVQPIVIAVFVGLILGDMQTSMIIGAGMQLVY LGVTSTPGGNVPSDPALAACIAIPIAVQAHMEPNLAIALAIPFGVIGVFLDQLRRTLNAA WVHMADKYAEEANTGGIMRCAFLYPALLGLVLRFPVVFGANYFGQSVVEKFLALMPHWLT HSFEIMGGILPALGFAITIMVIGKKSLLPWFIGGFFAVIYLKVDIMAMAIFGTCVAFLVK GLAKNEGASS >gi|316920349|gb|ADCU01000001.1| GENE 578 629235 - 630101 813 288 aa, chain + ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 5 288 3 286 286 477 88.0 1e-134 MSESTQDIMQHELVERARHSSALTKGDITKAWFIYWLGAEVSSSYERLQSLIFCASMTPI IKKLYPEKEERAEALKRHLNFFNTEQTFGAVIQGVAIAMEEQKTRGEPISDASITGIKTG LMGPLAGIGDSVIWAAVMPLLIAIFIPFAAKGSAFGGILPLILYTGITLAVSYGLVHKGY TLGRDSIITLLQGGRIKELIYGANVLGLIMMGALSASYVKITSPLKISALEGSEIVVQQI LDSIAPGLLPLAAVFSIYFYLTKKGPRYTTILLSVVVISVVCSLLGVL >gi|316920349|gb|ADCU01000001.1| GENE 579 630113 - 631237 773 374 aa, chain + ## HITS:1 COG:STM3768 KEGG:ns NR:ns ## COG: STM3768 COG1921 # Protein_GI_number: 16767052 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Salmonella typhimurium LT2 # 1 364 1 364 369 493 73.0 1e-139 MSQNIYQRLGLKRVINACGKMTILGVSAVSPEVMQATAEAAGSFVEIDKLVDRTGQLVST HTGAEDSYITSCASAGIAIAVAAVITRGEPDRVALMPDSSGMANEVLMLRGHNIDYGAPI TSAIRLGGGRVVEVGQSNLAARWQLEKAISERTAALLFVKSHHSVQKGMLTLADFVEVAK AHQLPLIVDAAAEEDLRLYVSQGADLVIYSGAKAFNAPTSGFITGKREWIECCKAQHHGI ARAMKIGKENMVGLVKALELYAEGADSMTPDALATTVDAISALHGFSAEIEQDEAGRAIW RVQVRVHPDVLGIDARQVEALLRTGDVAIYTRRYFLHQGVFSIDPRTLDQSELAMIVERL AQISAEQENCHAKH >gi|316920349|gb|ADCU01000001.1| GENE 580 631224 - 631967 654 247 aa, chain + ## HITS:1 COG:no KEGG:SeSA_A3974 NR:ns ## KEGG: SeSA_A3974 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 247 1 247 247 340 78.0 3e-92 MQSIKFYRDRVAINVLAKDIDNARAIYDAAEGHAVIGVLSAQFENVAQGVTEVKRWIAQV PSISVGLGAGDPAQFYKAAMIAAATGAAHVNQTFTGCGFAAGALAQAQHPHTHINALVSP TGDVGTVQISTGELSAAGDKALVSCDSAVNMMLDMGAHAAKFFPMGGERSLPELKALAES AARNGMTLIEPTGGIDLENFGIILQTCLQAGVARVMPHVYTSIIDPQSGETRPEDIKTLL EIIKSIV >gi|316920349|gb|ADCU01000001.1| GENE 581 632036 - 633214 959 392 aa, chain - ## HITS:1 COG:STM2207 KEGG:ns NR:ns ## COG: STM2207 COG0477 # Protein_GI_number: 16765537 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 13 391 14 392 393 487 70.0 1e-137 MRMYSTALRRLPDLTSTSFLIVAFLTGIAGALQTPTLSLFLSTEVVKSPFMVGLFYTGSA IIGIIVSQFLAARSDRSGDRKKLILLCCILGAAGCLLFAYNRNYYLLLIVGVMLTSFGST ANPQMFALAREYADKTGKEAVMFSSILRAQVSLAWVIGPPISFALALGFGFPFMYLAAMA TFLVCGLIVWYTLPSMPKAVVRTTGVLDAPRRNRRDTLLLFAACTLMWTCNSMYLINMPL YIIHELHLPDKLAGVMMGTAAGLEIPTMLIAGYYAKRFGKRFLMLVALVAGLAFYAGLLF LISPWALLALQLLNAIFIGILAGIGMLYFQDLMPGQAGSATTLFTTATRTGWIFAGSVAG LIAQFWDYYAVFFVSLILLLVGVVCMWKIKEA >gi|316920349|gb|ADCU01000001.1| GENE 582 633490 - 636006 2587 838 aa, chain - ## HITS:1 COG:HI0643 KEGG:ns NR:ns ## COG: HI0643 COG0243 # Protein_GI_number: 16272586 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Haemophilus influenzae # 47 824 24 810 825 884 53.0 0 MKKELNSHIESVSDFEQKPLQVSRRRFLTGAGAVLSVPLLAGFWPKSALAEAISKALPQF TALRQAQTGILTAAHWGAFEAIVKDGKMVDVKAISDDPFPNELITMAPYQVHAENRIKYP MVRKGWLEGGPSNSQPELRGRDEWVRVSWDKALTLVSDQIARLQKEHGPQSIYAGSYGWK SVGMLHNSRTLLQRMMNLSGGFLGYAGDYSTGAAQVIMSHVVGSMEVYEQQTAWPNVIEN TQLVVMWGCNPMITLKNSWNVPDHVGQTGFEALKKKGTRVISIDPVHNDSAKFVNAQWIA PRPYTDTAMLIGIAHTLLTEKLHNQDFLNTYTVGFDKFEAYLMGQDDGIVKDANWAAEIS GVDAETLRQLARDMAKNRTMIMGGWGIQRQHHGEQQHWMLVTVASMLGQIGLPGGGFGFS YHYSSGGSPTAKGGILAGISAGNSPKNTPTPIPVARIAECLMNPGKTINFNGAQVTYPDV KMVYVAGGNTFHQHQDTNSLVKAFQKPETIVVNEPYWTATAKHADIVFPTTTSYERNDLE MGGDYSQLYVFPMHQCVPPQFESRSDFDIFAGISEKLGVLDAFTEGKDETQWLKGMYDDM KTQARAARVALPPFDMFWESNNYVRFPVPEANKQWVRFADYRENPLLNPLGTPSGKIEIY SDAIEKMGYEDCKGIPTWMPPHEWYKGPEAAKYPLSLNTAHPINRLHSQLDNTPLRKKYA VADREAILIHPEDAKSRGISNGDLVRAFNDRGQILVGAVVTEDVRPGVIRISEGAWFDPA DPATPGSLCKNGNVNCLTFDIGSSSLAQGNCGQMAQLEIEKYQGPVLNNTAHTVPAGA >gi|316920349|gb|ADCU01000001.1| GENE 583 636019 - 637182 849 387 aa, chain - ## HITS:1 COG:VC1951 KEGG:ns NR:ns ## COG: VC1951 COG3005 # Protein_GI_number: 15641953 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Vibrio cholerae # 19 379 15 365 368 293 43.0 3e-79 MSNRYQTPGKRRSRAWLWLLLLGAIIGAALLAGTATVMHKTSDTEFCISCHSMEQPLAEY QGSIHFQNTKGIRAECADCHVPHQPIDYLLTKVAALKDVYGEVTGKIDTPEKYEAHKLAM AQSVWDTLKKNDSATCRSCHSYDAMDVTAQKPEARQQHPVAIKNGETCIDCHKGVAHILP DMSGLAAAGASELANAAAKTPDTATTLYTIATEPFYLSADETQHNAGNLMPSTEVKVVKR QGDRVLADVNGWQQDGVSEVFYAAQGKRILSVLLGEDARKQLKTLSTAKDAETGLVWHQV SLQVWLPKKQLVDDQQQIWRYASDMMSANCTGCHGLTALDRFNANQWIGVVKGMAPRTSL TQEQLRVLTQYVQKHASDMPANQPDKI >gi|316920349|gb|ADCU01000001.1| GENE 584 637548 - 638723 997 391 aa, chain + ## HITS:1 COG:PA4344 KEGG:ns NR:ns ## COG: PA4344 COG1473 # Protein_GI_number: 15599540 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Pseudomonas aeruginosa # 9 390 7 388 406 416 56.0 1e-116 MKNFDSATLLSQLQQSQPQLEKIRHELHAHPELGFHETRTANKVAELLKTWGYDVATGIG GTGIVASLTKGSGTKSIGLRADMDALPIHEASGVKYQSGCEGKMHACGHDGHTSMLLGAA QWLASDSASFNGTVRLIFQPSEEDMRGAQAMIDDGLLTRFPVDAVYGMHNMPGYPQGHMA FKEGATMAAVDSLTITLTGKGSHGSTPEKSIDPIVAGASLVMALQTIVSRNVAAQDQAVV SVGAFQAGDAGNVIPQQAVLRLSIRSTDEDVRKNVLQRIRTITESQASCYGVTAQIESAV AGVVLMNTPHETAFAKQVAVTLLGNDKVVDMPNTFMGSEDFAFMLKHKPGCYCVIGNGDS PMLHHPQYDFDDRNLSVGAAYWVALTQSYLV >gi|316920349|gb|ADCU01000001.1| GENE 585 638755 - 639021 243 88 aa, chain - ## HITS:1 COG:PA4870 KEGG:ns NR:ns ## COG: PA4870 COG1734 # Protein_GI_number: 15600063 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Pseudomonas aeruginosa # 1 88 1 88 88 116 72.0 1e-26 MASGWANDGAVQDQIDATVDDAVARARSQLSHGESAHFCEECGAEIPEARRQALPGVQFC VNCQAEIDKKMQANSGYNRRGSKDSQLR >gi|316920349|gb|ADCU01000001.1| GENE 586 639440 - 640069 606 209 aa, chain - ## HITS:1 COG:STM2078_1 KEGG:ns NR:ns ## COG: STM2078_1 COG0139 # Protein_GI_number: 16765408 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Salmonella typhimurium LT2 # 7 117 2 112 112 185 76.0 6e-47 MLKESFLSEQQKEQLDWNKVDNLMPAIVQHAVSGEVLMLGYMTPEALDETNRSRHVTFYS RTKQRLWTKGESSGHFLNVVSITPDCDSDTLLVLAEPQGPTCHKGTRSCFSPATPDWAFL FQLEQLLGERKNADPKSSYTASLYASGTKRIAQKVGEEGVETALAATVNDRDELVNEASD LMYHLMVLLQDQDLDLSAVINNLRKRHEK >gi|316920349|gb|ADCU01000001.1| GENE 587 640063 - 640839 843 258 aa, chain - ## HITS:1 COG:YPO1543 KEGG:ns NR:ns ## COG: YPO1543 COG0107 # Protein_GI_number: 16121816 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Yersinia pestis # 1 258 1 258 258 481 91.0 1e-136 MLAKRIIPCLDVRDGQVVKGVQFRHHEIIGDIVPLAQRYAQEGADELVFYDITASSDGRV VDKSWVSRVAEVIDIPFCVAGGIKSVEDASQILTFGADKISINSPALADPDLISRLADRF GVQCIVVGIDTWFDAETDSYQVYQFTGDEKRTKATTWQTVDWVQEVQKRGAGEIVLNMMN QDGVRNGYDLRQLKLIREVCHVPLIASGGAGTPEHFLAAFRDADVDGALAASVFHKQIIN IGDLKRYLSQQGVEIRLC >gi|316920349|gb|ADCU01000001.1| GENE 588 640821 - 641558 873 245 aa, chain - ## HITS:1 COG:ECs2825 KEGG:ns NR:ns ## COG: ECs2825 COG0106 # Protein_GI_number: 15832079 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Escherichia coli O157:H7 # 1 245 2 246 246 398 80.0 1e-111 MIIPALDLIDGNVVRLHQGDYGQQRDYGNDPLPRLQDYQQQGGQVLHLVDLTGAKDPAAR QIPLLRKLLAGISVPVQVGGGIRSAEDVAALIEAGASRVVVGSTAVRQPEEVKQWFQRFG ADALVLALDVRIDANGSKNIAVSGWQEDSGVTLEHIVDEFLPYGLKHVLCTDISRDGTLS GSNVALYQEICARYAQVAFQSSGGIGSLEDIAALRGSGVKGVIVGRALLEGKFTVKEAIA CWQNA >gi|316920349|gb|ADCU01000001.1| GENE 589 641573 - 642181 549 202 aa, chain - ## HITS:1 COG:YPO1545 KEGG:ns NR:ns ## COG: YPO1545 COG0118 # Protein_GI_number: 16121818 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Yersinia pestis # 7 200 2 196 196 320 76.0 1e-87 MNAKETNVVILDTGCANLSSVQYAIQRLGYEPKVSREPDVVLTADKLFLPGVGTSQAAMQ QLRERNLIELIKACTQPVLGICLGMQLLASRSDEGDTETLGIIDTPVETMKDFGLPLPHM GWNQVSALAGHRLFSGLEDGAYFYFVHGYAYPVCANTIAQTHYGAPFSAAVQKDNFFGVQ FHPERSGAAGAQLLKNFLELTL >gi|316920349|gb|ADCU01000001.1| GENE 590 642181 - 643170 878 329 aa, chain - ## HITS:1 COG:STM2074_2 KEGG:ns NR:ns ## COG: STM2074_2 COG0131 # Protein_GI_number: 16765404 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Salmonella typhimurium LT2 # 125 329 2 206 206 363 84.0 1e-100 MDKLAFEPAVIPALLKLQQAGYRLVMITNQDGLGTASFPQADFDGPHNLMMQILTSQGVV FDDVLICPHLPADNCTCRKPKTELVQSYLNADVMDYAASRVIGDRETDIQLAENMGIAGI RYSAETMGWEKIADDLTKRDRHAQVSRVTRETAIDVNVWLDREGESHIRTGVGFFDHMLD QIATHGGFRMNIDVKGDLYIDDHHTVEDTALALGEALKKALGDKRGISRFGFVLPMDECL ARCALDISGRPYLVYKAEFTHQRVGDLSTEMVEHFFQSLAYAMGITLHLKTKGKNDHHRV ESLFKVFGRTLRQAIRVEGDTLPSSKGVL >gi|316920349|gb|ADCU01000001.1| GENE 591 643245 - 644348 1084 367 aa, chain - ## HITS:1 COG:YPO1547 KEGG:ns NR:ns ## COG: YPO1547 COG0079 # Protein_GI_number: 16121820 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Yersinia pestis # 2 350 4 352 382 514 70.0 1e-145 MSSSIEELARANVRELTPYQSARRLGGKGDVWLNANEYPVGTPYQLSTETFNRYPECQPK AVIENYASYAGVNSDQVLVSRGADEGIELLIRAFCEPGQDAVLYCPPTYGMYGVSAETFG IERRTIALREDWQLDLPAIEANLAGVKLIYVCSPNNPTGNLLSQSDLRQLLTLTAGKAIV AVDEAYIEFAPHATTVPWLAEFPHMVVLRTLSKAFALAGLRCGFTVASPEMITLLLKVIA PYPLSTPVADIAAQALSPEGVATMRQRVQSVLENRALLVKELTECDCVEAVYPGEGNYLI FRCSAAAAVFKLLWDQGIILRDQSKQPSLSNCLRITIGTQEENRKVIDALRAFSATVASK QLSQEAM >gi|316920349|gb|ADCU01000001.1| GENE 592 644348 - 645700 1052 450 aa, chain - ## HITS:1 COG:YPO1548 KEGG:ns NR:ns ## COG: YPO1548 COG0141 # Protein_GI_number: 16121821 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Yersinia pestis # 9 437 5 433 443 612 74.0 1e-175 MTAADKNNNFNNITFWSECDAQQQQALLQRPAVTASDRISTSVAEILQQVKSGGDAALRE LSAKFDKVETNALRISIRDIEQAASHLDDEIKNAMQQAAKNIEKFHVAQILPAVDVETQP GVRCQQITRPLASVGLYIPGGTAPLLSTVLMLGIPARVAGCKRVVLCSPPPIADEILFAA SLCGITEVFQVGGAQAIAALAFGSESIPKVDKIFGPGNAYVTEAKRQVSQRIDGAAIDMP AGPSEVLVIADEKATPAFIAADLLSQAEHGPDSQVILLTPDAEIAKRVAIEVDNQLATLS RADIARQALDSSRLIVTSSLEECVEISNRYGPEHLIIQTREPRQWVDKISSAGSVFLGDW SPESAGDYASGTNHVLPTYGYTATYSSLGLADFQKRMTVQQISAEGLLGLAPVIEAMAAA ELLTAHKNAVTLRVAALRAKETTTSPKESI >gi|316920349|gb|ADCU01000001.1| GENE 593 645706 - 646605 858 299 aa, chain - ## HITS:1 COG:YPO1549 KEGG:ns NR:ns ## COG: YPO1549 COG0040 # Protein_GI_number: 16121822 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Yersinia pestis # 1 299 1 299 299 524 89.0 1e-149 MLDKTRLRIAMQKSGRLSEDSQELLARCGIKINLQQQRLIAFAENMPIDILRVRDDDIPG LVMDGVVDLGIIGENVLEEELLSRRAQGEDPRYFTLRRLDFGSCRLSLAMPLDVTYDGPQ CLQDSRIATSYPHLLKQYLDKQNIRFKSCLLNGSVEVAPRAGLSDAICDLVSTGATLEAN GLREVEVIYRSKACLIQRDGEMPAAKQELIDKLMTRIQGVIQARESKYIMLHAPSDKLEQ IIQLLPGAERPTLLPLAGDQNRVAMHMVSSETLFWETMEKLKSLGASSILVLPIEKMME >gi|316920349|gb|ADCU01000001.1| GENE 594 647278 - 648105 701 275 aa, chain + ## HITS:1 COG:YPO1551 KEGG:ns NR:ns ## COG: YPO1551 COG0451 # Protein_GI_number: 16121824 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Yersinia pestis # 1 275 1 275 275 369 68.0 1e-102 MNKVAIVGLGWVGMPLALSLLGRGYRVVGSKTTPDGVEAARMSGIECYPLVMTPELECEQ DDLEQLLDADALVITLPASRRPEEGERYLHAVQLLVDSALAHNVPRIIFLSSTSVYGDAV GTVNERSELQPTTSAGRTLAELETWLHDLPNTSVDILRLAGLVGAGRNPGRFLAGKTDVV GASSGVNLVHQDDVIAAIQMLLKLPQGGHVYNLCAPIHPTKAEFYPPLARSLGLEPPQFA PEEKPSQGKLVDGSLISKELGFEYQYSNPALMPWN >gi|316920349|gb|ADCU01000001.1| GENE 595 648392 - 649708 1309 438 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227993272|ref|ZP_04040336.1| SSU ribosomal protein S12P methylthiotransferase [Meiothermus ruber DSM 1279] # 18 436 1 419 442 508 58 1e-142 MQQPRIGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDDAELVIVNTCGFIDSAVQESL EAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEAVLKHVHQYVPKPTHNP FTSLVPEQGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLVDA GVKELLVISQDTSAYGVDVKHRTGFWNGQPVKTSMISLCEQLSSLGVWVRLHYVYPYPHV DDVIPLMAEGKVLPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWRETCPQLTLRSTF IVGFPGETEEDFQMLLDFLSEAKLDRVGCFKFSPVEGAAANELADQVPEEVKEERFHRFM QLQQQISAQRLQDKVGHTLPVIIDEVDEEGAIGRSMADAPEIDGVVYLNGETKLKVGDVV NVTIENVDEYDMWGSVCA >gi|316920349|gb|ADCU01000001.1| GENE 596 649873 - 650412 260 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227377549|ref|ZP_03861010.1| acetyltransferase, ribosomal protein N-acetylase [Kribbella flavida DSM 17836] # 2 179 5 184 186 104 33 8e-21 MITIETQRLTMRQITESDWDFFCALYRDEQLMALIADAQTERQIRAAFDCRLPEWRKEQP QWLCLVMIERDTGQRVGLTGFVSEWLPHRMAEVGYIIAPQFQRKGYGQESLSALIDFAFS QCGFHKLKAVVTSGNNASRALLMNTGFQQEGCLRKNYYLQGKWHDDWVFGLLAEEYSRR >gi|316920349|gb|ADCU01000001.1| GENE 597 650449 - 651645 891 398 aa, chain - ## HITS:1 COG:RSp0310 KEGG:ns NR:ns ## COG: RSp0310 COG0477 # Protein_GI_number: 17548531 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 1 368 39 407 450 144 28.0 3e-34 MTPHSYWKKDITLFLSAQTISLFGSSIVQYAIIWYITLTTSSGLMITLSTLCGFLPQLII SLFAGVWVDRYNRKYVSMISDAVIAVVTLLLAISFILGYKPLWLIFAVLAVRSFGTGIQT PTVNSIIPQLVPKEHLIRVNGINSTLSSLNMLIAPATSGVLYAYLSIEKIFFVDVITAAI ALTLMSMLKLARLSSQNLEGKSTIKAIREGFYYLKENPFISYLIIFLIVMMILISPAAFM TPLMVSRSFGPEAWRLAINEMAFSSGAIVGGIAIAMWGGFNSRLRTTLLAGGAYGFFMIA LGCAPVFAIYLAFNFLIGITMPCFNAPITALLQEKVDPAMHGRIFSLVQVANCCALPLGM VLFGPLADHFRIEHLLVMAGILVLLLCAQLFVKRTLAA >gi|316920349|gb|ADCU01000001.1| GENE 598 652051 - 652872 711 273 aa, chain - ## HITS:1 COG:STM2950 KEGG:ns NR:ns ## COG: STM2950 COG1237 # Protein_GI_number: 16766256 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily II # Organism: Salmonella typhimurium LT2 # 1 272 1 265 265 209 42.0 3e-54 MSLNITVLLENKNRHPQLDGGVGLSLLLDDGEQRILFDTGQDQRFCDNAHRLGIDLGTLT RVVLSHGHYDHFGGLPYLIPHTPHKPEVICHPDVFLTRYAGKFVGSRAIRLKKISPENSE TALKTHFPFRLSRHPVSIGSRFIFAGEIERSNKHKSFGLIENEDGFTTDYVKDDSCLIWQ GSQGLIIIVGCSHSGICDIIRYAKHITGIDKVSAVIGGLHLRSAGIREMLSTRRYFQAQN IDLIYGCHCTGAWGRLWLPNAQPLNTGDSLRLE >gi|316920349|gb|ADCU01000001.1| GENE 599 652923 - 653816 603 297 aa, chain - ## HITS:1 COG:alr0124_1 KEGG:ns NR:ns ## COG: alr0124_1 COG4886 # Protein_GI_number: 17227620 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Nostoc sp. PCC 7120 # 14 297 172 456 461 164 37.0 2e-40 MLLHQRTSSSSSQSNTRFLNLDNQQLECLDGIELNASLTGLSVYNNQLSSYPEQIGMLSE LQVLNISCNQMTKIPDSIGQLRALEMLDLGHNRLSELPDTMGKLTQLIYLYLSNNSLTDI PATFSALRNLRYLNITDNHLTAIPEAVFAMSALEELRLYNNKISVLAEKISELKNLQELH LMNNHFSQFPDSIGQLTQLRVLDISGNRIKSIPDSFAQLNHLQDLNFRFNNLSEVPDTIA ALTQLQTLDLRANNLASLPESIQELKNLKRLDLRWNSFTTYPEQLASLVKQGCLIHI >gi|316920349|gb|ADCU01000001.1| GENE 600 654048 - 654686 540 212 aa, chain + ## HITS:1 COG:ECs0382 KEGG:ns NR:ns ## COG: ECs0382 COG1280 # Protein_GI_number: 15829636 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 206 14 219 223 281 72.0 5e-76 MEPLHAIWVTIGLFVLTFFNPGANLFVVVQTSLSSGRRAGVCTGLGVALGDAIYSGLGLF GMVALMTQFESLFSLIKIAGGLYLLWYAYGVVRNQNDVQISALHTLIPGKGAVFFRRGLI TDLSNPQTVLFFISIFSVTLSADTPIWAKLLTWAGIVLSSVLWRIFLSQAFSLSVVRRAY SRIQRVASKIIGAVVGIFALRLIYEGGRELSR >gi|316920349|gb|ADCU01000001.1| GENE 601 655128 - 655865 814 245 aa, chain + ## HITS:1 COG:no KEGG:Spro_2136 NR:ns ## KEGG: Spro_2136 # Name: not_defined # Def: gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3) # Organism: S.proteamaculans # Pathway: Pentose phosphate pathway [PATH:spe00030]; Metabolic pathways [PATH:spe01100] # 1 245 5 245 245 346 70.0 4e-94 MAKETSGSSRRDFLLKTITLVPAVAIGGTGIGSLAAPAIVQAAEPKAPEKHTARDYNPTF FTPEEYAFVKAAVARLIPNDDRGPGALEAGVPEFIDRQMNTPYATGSQWYMQGPFNPDAE HDFGYQLPLTPQQIYRLGVAEANDYAKKQGGKVFAELPQDKQDDLLSQMEGGKAEFTQVP SKVFFSFLLQNTREGFFSDPIHGGNQGMVGWTLINFPGARADFMDWVERGERYPFPPVSI RGERG >gi|316920349|gb|ADCU01000001.1| GENE 602 655869 - 657653 1684 594 aa, chain + ## HITS:1 COG:PA2265 KEGG:ns NR:ns ## COG: PA2265 COG2303 # Protein_GI_number: 15597461 # Func_class: E Amino acid transport and metabolism # Function: Choline dehydrogenase and related flavoproteins # Organism: Pseudomonas aeruginosa # 1 594 1 591 591 916 74.0 0 MANTMKKVDAVVVGFGWAGSIMAKELTEAGLNVVVLERGPHRDTYPDGAYPQVIDELTYN IRRKLFQDLSKSTVTIRHNASQTALPYRQLAAFLPGTGTGGAGLHWSGVHFRIDPMELRM RSHYEERYGKNFIPEGMTIQDFGVTYEELEPYFDKAEKVFGTSGTPWSVKGKVVGQGKGG NPFAPDRSDNFPLPAQKRTFSAQMFAQAAESVGYHPYDLPSANTSGPYTNTYGAQMGPCN FCGFCSGYACYMYSKASPNVNVWPALRQEPKFELRTNSHVLRVNLTDDKKRATGVTYVDA QGRQVEQPADLVILAAFQFHNVHLMLLSGIGKPYNPITNEGVVGRNFAYQNISTIKAFFN KDIFTNTFIGAGGAGVGVDDFNADNFDHAKYGFVGGSPFWVNQAGTKPISGLPTRPGTPT WGSKWKAEVADVYSHHVSMDAHGAHQSYRANYLDLDPNYKDVYGQPLLRMTFDWQENDIK MSQFMHGRMHKIAEAMNPTVISGSPKSEGTHFDTTVYQTTHMNGGAIMGEDPKTSAINRY LQSWDVPNVFVPGASAFPQGLGYNPTGTLAALTYWSARAIREQYLKNPGPLVQA >gi|316920349|gb|ADCU01000001.1| GENE 603 657666 - 658994 1124 442 aa, chain + ## HITS:1 COG:PA2266 KEGG:ns NR:ns ## COG: PA2266 COG2010 # Protein_GI_number: 15597462 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Pseudomonas aeruginosa # 27 419 27 419 439 591 70.0 1e-169 MKKLISALVLSAISLSAAAQETSGVDLIKRGEYLARVGDCVACHTSKGGTPFAGGLPMAT PIGTIYSTNITPDKKHGIGEYSFEDFDKAVRHGVAKNGDTLYPAMPYPSYAVVTEPDMRA LYAYFMQGVKPVAQANKDSDIPWPLSMRWPLSIWRGMFAPDVQDFTPAQGEDAVLARGRY LVEGLGHCGACHTPRSITMQEKALNNDEGEVYLSGSAPIDGWIATNLRGDYKDGLGSWSE QDLTEFLRTGRNDRTAVFGGMTDVVEHSLQYLTPEDATAIARYLKSLPANDKDQKPFKED KTVANALWKGDDSKTGAALYVDNCAACHRTDGSGYTRFFPELRGNPVVMTDDATSLIHVV LTGNTLPGVQGAPSSITMPAFGWRLNDQQVADVVNFIRTSWGNKAPEITAKDVAKVREDK DIIPDPKLLGSPDIEKLTASQH >gi|316920349|gb|ADCU01000001.1| GENE 604 659424 - 660569 1041 381 aa, chain + ## HITS:1 COG:YPO1320 KEGG:ns NR:ns ## COG: YPO1320 COG1686 # Protein_GI_number: 16121602 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Yersinia pestis # 13 381 64 432 432 603 79.0 1e-172 MAIPMTYADEAAPAAPQINAKAYVLMDYDSGKILTEANADERLDPASLTKIMASYVIGQS IKAGKITPNDMVVVGKDAWATGNPILRGSSLMFLKPGDRVPVSELNKGVVIQSGNDASIA LADYVAGSQDAFVSLMNKYVEAWGLKNTSFKTVHGLDSEGQYSSARDMALISQRLIADVP DEYALHKEKEFTFNKIRQVNRNRLLWDSSLNVDGIKTGYTSGAGHNLVSSATDGPMRLIS VVLGAPTDRIRFEESKKLLTWGFRFYETVTPIKVGQAFTTEKVWFGDKSEVELGVNKNAA VTIPRGQLKNLKASFTLNQPQLEAPLAKGQVVGTIDFQLNGKTIEQRPLVVLNEVKEAGF FGRMIDFVMMKIHQIFGSWFG >gi|316920349|gb|ADCU01000001.1| GENE 605 660877 - 662244 1160 455 aa, chain - ## HITS:1 COG:sdaB KEGG:ns NR:ns ## COG: sdaB COG1760 # Protein_GI_number: 16130704 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli K12 # 1 454 1 454 455 777 81.0 0 MISVFDIYKIGIGPSSSHTVGPMKAGKEFSDDLIKKGILNDVTRVVVDVYGSLSLTGKGH HTDLAIIMGLAGNMPDSVDIDMIPGFIKDVEQRGRLLLAKGQHEVDFPLETSMNFHQDNL SLHENGMRITALSGDSVVHSKTYYSIGGGFIVDEENFGKQSENEVQVPYPFKSAADLQEH CKASGLSLSGLVMQNELALHSKEEIDAHFTRVWDVMRSGIERGMNTEGILPGPLRVPRRA SALRRMLVTHDKMSVDPMAVVDWINMYAFAVNEENAAGGRVVTAPTNGACGIIPAVLAYY DKFIREVNTNSYSRYFLASGVIGALYKMNASISGAEVGCQGEVGVACSMAAAGLTELMGG SPAQVCMAAEIAMEHNLGLTCDPVAGQVQVPCIERNAIAAVKAVNASRMAMRRTSDPRVC LDKVIETMYETGKDMNSKYRETSRGGLALKVLTCG >gi|316920349|gb|ADCU01000001.1| GENE 606 662412 - 663701 1333 429 aa, chain - ## HITS:1 COG:YPO1321 KEGG:ns NR:ns ## COG: YPO1321 COG0814 # Protein_GI_number: 16121603 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Yersinia pestis # 1 427 1 428 433 675 87.0 0 MDTTQTSTVTSTSGSATAWRKSDTMWMLGLYGTAIGAGVLFLPINAGVGGLIPLIIMAII AFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGVGAGKLITLLYFFAIYPILLVYSVA ITNTVDSFITHQLGMTAPPRAILSLILILGLMTIVRLGEQFIVKAMSILVFPFVAVLMLL ALYLIPNWNGAIFETAAMTQSMNGSGLWMTLWLVIPVMVFSFNHSPIISAFAVAKREEYG VDAEKKCSKILAYAHIMMVLTVMFFVFSCVLSLSPADLAEAKAQNISILSYLANHFNTPV IAYMAPVIAFIAITKSFLGHYLGAREGFNGMVIKSLRSKGKTIETNKLNKITALFMLLTT WAVATLNPSILGMIETLGGPVIAMILFLMPMYAIHKVPAMRKYSGHISNVFVVVMGLIAI SAILYTLFG >gi|316920349|gb|ADCU01000001.1| GENE 607 664578 - 665342 591 254 aa, chain - ## HITS:1 COG:YPO1322 KEGG:ns NR:ns ## COG: YPO1322 COG1349 # Protein_GI_number: 16121604 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Yersinia pestis # 1 254 1 254 254 330 60.0 2e-90 METRRYDRINRLSQALKRTDKLHLKDAAELLNVSEMTVRRDLASQSSDVVLLGGYVVLDP KIHQSARYFVTDQQEKRVKEKRHIGTLAAQLVQEDDVVFFDCGTTVPFIIDALDESLSFT GVCYSLNTFMALRTKPNCKVILCGGSFNPDSAIFVPNGISSELDNLCPTIAFISAAGITP KQGATCFNLDEIALKQKAIQRARRSVLIADASKFGEVKPAWIAPLSEFSILVTDQAPRSE ICQFLILKNVQLLC >gi|316920349|gb|ADCU01000001.1| GENE 608 665621 - 666229 459 202 aa, chain - ## HITS:1 COG:STM0865 KEGG:ns NR:ns ## COG: STM0865 COG0671 # Protein_GI_number: 16764227 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 1 201 2 201 202 211 53.0 6e-55 MEQFNQAFFLLVNATPNSPAWLITLAKFFANDLIAIVPILIVGFWLWGPRKEMAENRTLA TKATFALVFALLASRVIGMVFPHARPFVDGFGHQFIPHAPDNSFPSDHGTGIFTFALAFL FWYRRIWLGALLIVLGAGIAWSRVYLGVHWPLDMVGGLLVGLMSCAVTQLLWGVIGQGIV NRLYQVYQFSFALPIRRGWVRQ >gi|316920349|gb|ADCU01000001.1| GENE 609 666530 - 667774 776 414 aa, chain - ## HITS:1 COG:YPO2040 KEGG:ns NR:ns ## COG: YPO2040 COG0477 # Protein_GI_number: 16122279 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 29 393 25 375 401 119 26.0 8e-27 MKTKNKIVSIPLYANPRDLITGQSLFSGAFYLVVPFLVLFMHDSLRLSGEIIGLVVGLRF FAQQMMYIKSTQLAHSIGGKNLLLLGCFTQASGFLCLALASQPNLLITGALLTGIGGALF APAKNLLMNEAGLGDHKLKTEKVQQLKNSVSIAGELGSIVGPLLGLWLVGLGFHVLAWGG VLIFVVAMIWLAKKLPASFYYPAMPDKKITWQTVLQNRRFLLFVLAYSSYLFSYSQLFLA LPLTIRHLGGESQYIGLLFAFSVLISLLIQIGLRNFTSKKESQALVMGFATLSLAFLYMA FIAIRHQTTGWHGYLPLLMFVFFINCGQFLIVPAAKRIVTYFAAGNDTAPYYQALALSGG IAVLVGSPIVGELMESTRHSLTLAGLPWFFMALFPALSAIAIGLIFPTTPARAY >gi|316920349|gb|ADCU01000001.1| GENE 610 668463 - 668726 183 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAIEGDEVVYPDASTAHIERDESTMMESIVEGVKCTVAATGTRVSNGDEIIDAGQQMSAM IRLANGAVTCGYFDPEEIELLKATGKI >gi|316920349|gb|ADCU01000001.1| GENE 611 668754 - 670130 353 458 aa, chain + ## HITS:1 COG:YPO0873 KEGG:ns NR:ns ## COG: YPO0873 COG5529 # Protein_GI_number: 16121180 # Func_class: R General function prediction only # Function: Pyocin large subunit # Organism: Yersinia pestis # 4 110 3 114 512 90 41.0 8e-18 MSQKGYFIRVGDKTSCGGTVRGGNPNYNMHGRAASRHGDLVTCGKDGKTYRIIGGIPGML DNNVQLAGTLDSISSCPCRAKLLSSLSSATYEKTSRAEARMAAAPQSEAPTQYAQAAKSH SQPLIAPEASSREPVDAGFCVLPLPSSVNSYEQFLFISPPEGTKELYRSLNGSGDVKAGS ILLLVDPLKQDPEQIAHLKAAKDRVDAALAPLTNEEANFLHKHYATIANFSSFADKGIGL AADPVGKYFENIEKILKEIQDTYKNTYLTRGALIGEQFYVKRSQLFKQLDSVLKIGFLNK GMKLGEYTKIKSALGLSTSSITHKWNTSGVSDIDGYAVHIERAAKYVKAMKYSGYAGIGF SALHSANEINEACSIGRESECTKKKYTEIGSFVGGTSLGIGAGYLAAPLCVAIGVGTAGL GGLACLVIAGGTAGYIGSELGSSGGELLGDKVYETYGK >gi|316920349|gb|ADCU01000001.1| GENE 612 671375 - 673063 1560 562 aa, chain - ## HITS:1 COG:YPO1326 KEGG:ns NR:ns ## COG: YPO1326 COG2985 # Protein_GI_number: 16121608 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Yersinia pestis # 1 562 1 562 562 976 91.0 0 MNIDVASLLTGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVLVVSLLLGQQHFAINTE ALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALVMALGFGKLFHWDIGL TAGMLAGSMTSTPVLVGAGDTLRQTMANNPSLAHLQDNLSLGYALTYLIGLVSLIFGARY LPKLQHQDLPTSAQQIARERGLDNEVQRKVFLPVIRAYRVGPELVSWADGKNLRELGIYR QTGCYIERIRRNGILATPDGDAVLQVGDEISLVGYPDAHARLDPSFRNGKEVFDRDLLDM RIVTEEIVVKNNNAVGKRLSQIKLTDHGCFLNRVIRSQIEMPIDDNIVLNKGDVLQVSGD ARRVKSVAERIGFISIHSQVTDLLAFCAFFIIGLMIGLITFKFSNFSFGIGNAAGLLFSG IMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAGVGLSAGAGMNHGLGQIGGQMLLSGL VVSLLPVVICFLFGAYVLRMNRALLFGAIMGARTCAPAMEIISDASRSNIPALGYAGTYA IANVLLTLAGTLIVIIWPGLGG >gi|316920349|gb|ADCU01000001.1| GENE 613 673402 - 673800 264 132 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_2529 NR:ns ## KEGG: NT01EI_2529 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 5 113 5 114 125 65 34.0 5e-10 MVIYRRWLGAIVSFILVVLLFIVLKPWTNAHGPNIVMKGEINLLLFVIPGFVASCFSVSG RIFYPFLGTLCAVLISTLIHLCYGTELRSGLQMFAYGTSALFWSVSGAFLYWFLTLAWQK KQKRSLGAERYR >gi|316920349|gb|ADCU01000001.1| GENE 614 673870 - 674133 325 87 aa, chain - ## HITS:1 COG:STM0872 KEGG:ns NR:ns ## COG: STM0872 COG0695 # Protein_GI_number: 16764234 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Salmonella typhimurium LT2 # 1 86 1 86 87 169 91.0 2e-42 MFAVIFGRPGCPYCVRAKELAEKLTEERDDFNFRYIDIHAEGITKADLEKTVGKPVETVP QIFIDQKHIGGCTDFEAYAKENLALFQ >gi|316920349|gb|ADCU01000001.1| GENE 615 674299 - 674604 258 101 aa, chain + ## HITS:1 COG:no KEGG:YE1481 NR:ns ## KEGG: YE1481 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 90 1 90 102 92 47.0 5e-18 MKALGDLPKPVLVCEAIGMVLLVVAYLSIHDYIHLPNPLATPFAAIMMIFAGVALMIPAA VALIWSLTHSKTPLFSLTPKQDTPAAKPEVKSEEHKNDANH >gi|316920349|gb|ADCU01000001.1| GENE 616 674588 - 675310 600 240 aa, chain + ## HITS:1 COG:ECs0931 KEGG:ns NR:ns ## COG: ECs0931 COG0778 # Protein_GI_number: 15830185 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 240 1 240 240 350 72.0 1e-96 MTPTIDLLCSHRSVRAFTPQPIGDAEREAIFAAARATSSSSFLQCSTIIRITDSSLREQL VELTGGQQHVAEAAEFWVFCADFNRHQEIFPQAELGLAEQLLLGTVDTSLMAQNAFTAAE SLGLGGVYIGGLRNNIDEVTQLLKLPRNVLPLMGLCLGYPAVEPAQKPRLPQAMVVHENQ YQPLDRELLAQYDAHISAYYQSRSSNARCDTWSDQIKRTLAKESRPFMLEYLHKQGWILR >gi|316920349|gb|ADCU01000001.1| GENE 617 675338 - 676225 1199 295 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50121603|ref|YP_050770.1| ribosomal protein S6 modification protein [Pectobacterium atrosepticum SCRI1043] # 1 293 1 293 303 466 79 1e-129 MKIVILSRDGSLYSCKRLKEAAQRRGHQIDIVDPLSCYMNINCAAPSVHEKGRKLERYDA VIPRIGSAITFYGTAVLRQFEMLGSFPLNTATSIAKARDKLHSLQLLAQQGIDLPVTGFA HRPDDTSDLIEMVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRGLNAHILVQEYI KEARGADIRCLVIGKRVVAAIERQAKPGEFRSNLHRGGTAKRVTITDQEREVALKAAATL GLCVAGVDILRSDRGPLVMEVNSSPGLEGIESTTGKDIAGMMIEFIERAIARKKS >gi|316920349|gb|ADCU01000001.1| GENE 618 676222 - 676416 227 64 aa, chain - ## HITS:1 COG:no KEGG:NT01CX_1350 NR:ns ## KEGG: NT01CX_1350 # Name: not_defined # Def: hypothetical protein # Organism: C.novyi # Pathway: not_defined # 5 62 8 65 67 65 56.0 7e-10 MPLSRYATMDPLMLMSIINMKLRDECPSLDDLARRYDLSVEVLQERLSQAGYQYQPATNQ FVQI >gi|316920349|gb|ADCU01000001.1| GENE 619 676559 - 677050 564 163 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_2526 NR:ns ## KEGG: NT01EI_2526 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 163 1 163 163 246 78.0 1e-64 MDSLIVPDLDLLRRWLDQLGITFFECDSCQALHLPHMQNFDGVFDAKVDMIDKTILFSAL AEIRPTSLIPLVADLSQMNASTLAVKVFIDIQDDNLPKLIACLSLNGSVGITLEQFAAFM QQGEEQLSMIMMETRANGMLFLGEGEESDADYDPEAASGPLLH >gi|316920349|gb|ADCU01000001.1| GENE 620 677445 - 678551 1137 368 aa, chain + ## HITS:1 COG:YPO1331 KEGG:ns NR:ns ## COG: YPO1331 COG0687 # Protein_GI_number: 16121613 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Yersinia pestis # 1 368 1 369 369 631 85.0 0 MFNGHKKWLVGAIAGAFIAAGATADDQKTLHIYNWSDYIAPDTLANFTKETGIKVVYDVF DSNEVLEGKLMAGSTGFDLVVPSASFLERQIGAGVFKPLDKSQLSNYKNLDPELLKLVAK HDPDNKYAIPYTFATTGIGYNVEKVKAALGKDAPVNSWDLVLKPENLEKLKSCGVSFLDA PAEIYATVLNYIGKDPNSSDANDYNGAANDLLLKLRPNIRYFHSSQYINDLANGDICVAV GWSGDVMQAANRAKEAKNGVNIAYSIPKEGALVFFDVFAMPADAKNTTEAYQFLNYLMRP EVIANISNHVYYANANKAATPLVNPEVRDNPGIYPPPDVRAKMFTLKVQSPKIDRVITRA WTKVKTGK >gi|316920349|gb|ADCU01000001.1| GENE 621 678705 - 679838 1010 377 aa, chain + ## HITS:1 COG:YPO1332 KEGG:ns NR:ns ## COG: YPO1332 COG3842 # Protein_GI_number: 16121614 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Yersinia pestis # 1 375 1 375 377 677 86.0 0 MNETIPRQAPKVHKAFAPLLEIRNLSKTFDGQLAVDDVNLTIYKGEIFALLGASGCGKST LLRMLAGFEMPTSGQIVLDGQDLAHVPPYQRPINMMFQSYALFPHMSVEQNIAFGLKQDR LGRNEIRQRVEEMLALVHMQEYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGAL DKKLRERMQLEVADILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH PNSRYSAEFIGSVNVFEGILKESLEDSLLIQSPGLTHPLKVDLDAAVVEGVPVQIALRPE KILLCDTPPKDGCNYATGEVVHIAYLGDLSIYHVKLLSGQMISAQLQNGHRFRKGMPTWG DEIKLCWDADSCVVLTV >gi|316920349|gb|ADCU01000001.1| GENE 622 679848 - 680810 804 320 aa, chain + ## HITS:1 COG:ECs0936 KEGG:ns NR:ns ## COG: ECs0936 COG1176 # Protein_GI_number: 15830190 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Escherichia coli O157:H7 # 1 320 1 316 317 456 80.0 1e-128 MSTLFTSRSDRPPVQRVGKLTAWLYRLRGVHGRKLVIALPYLWLICLFLLPFLTVFKISF AEMARAIPPFTDLVTWADDKLDIALNFANYFQLFDDPLYVDAYLQSLQIAAVSTLCCLLI GYPLAWAVAHSSSSTRNILLLLVILPSWTSFLIRVYAWMGILKENGVLNNVLLWLGVIDH PLIILHTNTAVYIGVVYSYLPFMVLPIYTALTRIDYSLVEAALDLGARPMKTFFKIIVPL TKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAILMLL LLIVPIMLFHKYQNKELGAH >gi|316920349|gb|ADCU01000001.1| GENE 623 680810 - 681655 586 281 aa, chain + ## HITS:1 COG:YPO1334 KEGG:ns NR:ns ## COG: YPO1334 COG1177 # Protein_GI_number: 16121616 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Yersinia pestis # 1 281 1 281 281 408 86.0 1e-114 MNTLPVVRSPWRIVILVVCFFFLYAPMLLLVIYSFNSSKLVTVWAGWSTRWYSVLFHDSV MISAVGLSLTIAAAAATMATILGTMAAVVMVRFGRFRGSNGFAFMLTAPLVMPDVITGLS LLLLFVAMGHLIGWPAERGMLTIWMAHVTFCTAYVTVVVSSRLRELDKSLEEAAMDLGAA PLKVFFVITIPMIAPALVSGWLLAFTLSLDDLVIASFVAGPGSTTLPMLVFASVRMGVNP EINALASIILLVVGVIGLIAWWFMARSEKRRLKEIRKAAGS >gi|316920349|gb|ADCU01000001.1| GENE 624 681735 - 682211 300 158 aa, chain + ## HITS:1 COG:no KEGG:YPDSF_2361 NR:ns ## KEGG: YPDSF_2361 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 16 156 9 147 154 137 50.0 1e-31 MSEILRNRHEMLRKWAIAPVSVLIAGTAIIGIHTLGFLLLMHELGFEGVSTFVSDSVQDW DSALLCLASIVVLLVEISCGFAVVQGKNLGRWGYLGCQVLVISYMLLASLGWFHPEMFSV NGETGSEIFTELVGLKIPELMILGLLFIPRASRRYFSS >gi|316920349|gb|ADCU01000001.1| GENE 625 682333 - 683466 867 377 aa, chain + ## HITS:1 COG:YPO1336 KEGG:ns NR:ns ## COG: YPO1336 COG2265 # Protein_GI_number: 16121618 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Yersinia pestis # 1 372 1 372 376 584 77.0 1e-166 MHCALYQSGTCRSCQWLEMPYPQQIAEKQQQLELLMSDLPVERWLPSVSSAEQAFRNKAK MVVSGSVERPLLGMLHRDGTAVDLCECPLYPQSFSAVFDVLKVFIARAGLTPYNVARKRG ELKYLLLTESQKNNQLMLRFVLRSDAKLAQLRAALPWLQQQLPQLVVITANIQPVHMAIL EGDTEIFLTEQQALEESFNQVPLYIRPQSFFQTNPLVAASLYATARKWVHKLNISSMWDL FCGVGGFGLHCATPEMKLTGIEISAEAIACATRSAQKIGLQNVQFSALDSTRFASAEGEV PELVLVNPPRRGIGAELCEYLGKMAPDYILYSSCNAQTMAQDIARLKNYRIEQVQLFDMF PHTAHYEVLTLLVHQTR >gi|316920349|gb|ADCU01000001.1| GENE 626 683454 - 683942 469 162 aa, chain - ## HITS:1 COG:HI0402 KEGG:ns NR:ns ## COG: HI0402 COG0350 # Protein_GI_number: 16272351 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Haemophilus influenzae # 1 160 15 172 190 160 49.0 9e-40 MYYALYSSPVGLLRLVSDAQGLRQLWLPNEIEEKLCPAEWIEDGDFTINRQIRDCLDAYF AGEKLRFDNLPLAPVGTAFQQSVWKELLTIPYGTISHYSVIANALNNPKAVRAVGGAVGR NPISILIPCHRVLGKDLSLTGYSGGLPIKKALLELEKIIYRV >gi|316920349|gb|ADCU01000001.1| GENE 627 684021 - 684209 152 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKDKGKNSELETVLRCLRSLFVPFWGLVLQGNACRNADDLGDAANQQPRVFQPQITVGTT AD >gi|316920349|gb|ADCU01000001.1| GENE 628 684184 - 684915 866 243 aa, chain - ## HITS:1 COG:ZartJ KEGG:ns NR:ns ## COG: ZartJ COG0834 # Protein_GI_number: 15800615 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 EDL933 # 1 243 18 260 260 382 74.0 1e-106 MKKLMVCALLAGMSFTATAAETIRFASSATYPPFESMDSNNQIVGFDMDLAKALCKQMQA TCTFTNQAFDSLIPALKFKRYDAVISGMDITPERQKQVAFTQPYYANSAIIIAEKGKYKT FADMKGLRVGMENGTTHQKYLQDKHPEIKTVAYDSYQNAILDLKSGRLDGVFGDTAVVNE WLKSNPNLAAVGDHVTDAQYFGTGLGIAVRPENTALLAQLNKALDEIKANGTYQKINQQW FPQ >gi|316920349|gb|ADCU01000001.1| GENE 629 685156 - 685824 640 222 aa, chain - ## HITS:1 COG:YPO1349 KEGG:ns NR:ns ## COG: YPO1349 COG4160 # Protein_GI_number: 16121629 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Yersinia pestis # 1 222 1 222 222 321 83.0 8e-88 MFEYIPDIIQGLPTSLSLTIISLLVALVLALLFTIVLTLRPVVLTQLVQGYITLFTGTPL LVQIFLIYYGPGQFDWIKQTPWLWNMLSQPWLCAMVALALNSAAYTTQLFYGAVKAIPSG QWQSCEALGMSRSQTLRILLPFAFKRALSSYSNEVVLIFKSTSLAYTITLMEVMGYSQQM YGRTYDVMVFGAAGVIYLCVNGLLTLIMRMVERRALAFERRN >gi|316920349|gb|ADCU01000001.1| GENE 630 685824 - 686540 672 238 aa, chain - ## HITS:1 COG:artQ KEGG:ns NR:ns ## COG: artQ COG4215 # Protein_GI_number: 16128830 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Escherichia coli K12 # 1 235 1 235 238 363 84.0 1e-100 MIEFQPLLSAAGMTVGLSLCALVLGLILAMIFAVWESSNIKPVAWLGTAWVTLVRGLPEI LVVLFIYFGSAQLLMVLSDGFSLNLGFVQIPIQLNIENFEVSPFVCGVIALALLYAAYAS QTLRGALKAVPEGQREAGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVS LISVNDLMLQTKSIATRTQEPFTWYMVAAAIYLVITLFSQYILKRIELRTTRFERGNA >gi|316920349|gb|ADCU01000001.1| GENE 631 686780 - 687511 778 243 aa, chain - ## HITS:1 COG:YPO1351 KEGG:ns NR:ns ## COG: YPO1351 COG0834 # Protein_GI_number: 16121631 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Yersinia pestis # 1 243 1 243 243 394 85.0 1e-110 MKKIIIATVLAGISVSASAAETIRFAAEASYPPFEFMDANNQMQGFDIDLANAICKQMKA TCTFTNQSFDSLIPSLKFKRIDAVISGMDITPERQKQVAFTAPYYDNSALFIAEKGKVAD IAALKGKRVGMQNGSTHQKYLQEKHPEITPVPYDSYQNAILDLKNGRLDAVFGDTAVVNE WLKQNSALTAVGDKVTDPNYFGTGLGIAVRQNNAELLNQFNAALNQLKQDGTYKTIYSKW FQQ >gi|316920349|gb|ADCU01000001.1| GENE 632 687590 - 688318 464 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 241 2 240 245 183 39 2e-44 MSIQINGINCFYGAHQALFDITLECPAGETLVLLGPSGAGKSSLLRVLNLLEMPRSGQLS IAGNKFDFSRTPGEKEIRELRRNVGMVFQQYNLWPHLTVMQNLIEAPCKVLGLSKAQAVE RAQKLLQRLRLTDYVDRFPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQI VSIIRELSETGITQVIVTHEVEVARKTASRVVYMEQGRVIEHGDASHFAHPQTEAFAGYL SH >gi|316920349|gb|ADCU01000001.1| GENE 633 689030 - 689350 471 106 aa, chain - ## HITS:1 COG:STM0930 KEGG:ns NR:ns ## COG: STM0930 COG0393 # Protein_GI_number: 16764292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 106 1 106 107 167 85.0 4e-42 MRNSTTPTLEGLTIVDYCGVVTGEAILGANIFKDFFAGIRDIVGGRSGAYENELRKAREI AFSEMNDQAKSLGANAVVGIDIDYETVGKDGSMLMVSVSGTAVKVK >gi|316920349|gb|ADCU01000001.1| GENE 634 689391 - 690248 680 285 aa, chain + ## HITS:1 COG:YPO1715 KEGG:ns NR:ns ## COG: YPO1715 COG3023 # Protein_GI_number: 16121975 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Yersinia pestis # 28 281 25 278 283 320 61.0 2e-87 MRKRIGFAAIAILLATGLVGCQHTPAQHDLIDRGTYLVEDRHQAQGVDERIRFLVLHYTA EDFHSSLKTLTDEHVSAHYLVPARPPQNNGKYVVWQLVPESQRAWHAGASAWRGRSNLND TSIGIEIENKGYQQGMLERIWLPYTEQQTELVIALSKDIVQRYGIAPQNVVGHMDIAPQR KLDPGPLFPWKTLAEQGVGAWPDRATVTRYLAGRAKEAPVDVLTLQKKLAAYGYDIVPNG INDTMSRNVIAAFQMHFRPADFRGIPDAETEAIADALLEKYGSTQ >gi|316920349|gb|ADCU01000001.1| GENE 635 690242 - 691261 767 339 aa, chain - ## HITS:1 COG:YPO1355 KEGG:ns NR:ns ## COG: YPO1355 COG0451 # Protein_GI_number: 16121635 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Yersinia pestis # 1 334 1 334 335 532 75.0 1e-151 MKVLVTGATSGLGRNAVEYLRHKGISVRATGQNQAMGDLLKKMGAEFIHADLTNLVSSQA KAMLNDVDTLWHCEGFTSPWGSEELFEKANVRSTRRLGEWAAAYGVRNFIHISSPAVYFD YRHHRDIKEEFVPNRYANYYARSKAAGEEVIQNLALSNPQTHFTILRPQGLFGPHDKVLL PRLLNAMRRHGTLLLPRGGDALVDMTYEENAVHAMWLATQIETTPSGRTFNISNHQPRHL RTLLQHLIDELGVKCKIRSIPYPMLDMMARGMEKIGANSPKEPALTHYGVAKLNFDMTLD TSRAQLELGYHPVVSIDEGIIRTAHWLKDHGRLQNRDRH >gi|316920349|gb|ADCU01000001.1| GENE 636 691681 - 693126 1080 481 aa, chain - ## HITS:1 COG:YPO1356 KEGG:ns NR:ns ## COG: YPO1356 COG0702 # Protein_GI_number: 16121636 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Yersinia pestis # 1 477 1 483 496 764 75.0 0 MTPQRILVLGASGYIGQHLIPKLIEQGHTVRAAARRIDWLREQAWPRVECQYVDLHKPET LPAAVADIDVVYYLVHGMGDGHDFVTGEINAAKNTCAALRDSGVKQVIFLGALQPDGDSS RHLIARKETGDALRASGIPVTELRASIIIGPGSAAFEVMRDMVYNLPILTPPRWVRSKSS PIALDNLLVYLTELLKHPAIGNRVYDVAGPEYISYQTMFERFIALSGKKRWMIPLPIPTR FISVYFLNMITSVPTTISRALIEGLKHDLPAHSTAIERLIPQHLINFDQAVQDTLDKEAE VVNSADWGYDPEARERWRPGYGFYPKHAGYEQETSASPEALWHVVQQIGGKEGYFYANIL WAIRARMDDVIGNKVVYGRPARNSLELGDLVDGWKVITVKPLRQLAMMFGMKAPGLGRLT FTIEDKGEKRVLDVRAWWHPAGFSGLLYWFAMMPAHLFIFRGMSKKIAKLAEAYDRENKQ G >gi|316920349|gb|ADCU01000001.1| GENE 637 693297 - 694349 1038 350 aa, chain - ## HITS:1 COG:YPO1357 KEGG:ns NR:ns ## COG: YPO1357 COG2008 # Protein_GI_number: 16121637 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Yersinia pestis # 1 332 2 333 339 500 74.0 1e-141 MIDLRSDTVTRPSEEMRLAMSRADVGDDVYGDDPSVNLLEQEAAELSGKEAALFLPTGTQ ANLVALLTHCQRGEEYIVGQKAHNYLFEAGGAAVLGSIQPQPIDAASDGTLPLEVVASVI KPDDVHFARTKLLCIENTHNGKVLPLSYLEQAWAFTREKGLALHVDGARIMNAAVALEVP LSTLTQYCDTLTICLSKGLGAPIGSLLCGSAAYIKQARRWRKMVGGGMRQAGILAEAARY ALLNNVERLREDHENAQWLANELSAIGVEVMAPGAQTNMLFLKVPAHEAAHLGGWMKERG VLMSAGAVTRIVTHLDVSRADLEQLVALWKEFKQSINTQTSTTATRAIYG >gi|316920349|gb|ADCU01000001.1| GENE 638 694711 - 696432 1364 573 aa, chain - ## HITS:1 COG:YPO1358 KEGG:ns NR:ns ## COG: YPO1358 COG0028 # Protein_GI_number: 16121638 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Yersinia pestis # 1 573 1 573 573 991 83.0 0 MKQTVATLVAKTLDQAGVKRIWGVTGDSLNGLSDSLLRMGTIRWIGTRHEEVAAFAAGAE AQLTGQLAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQEL FRECSHYCELISNPEQLPQALEVAMRQAILKKGVSVIVLPGDVALRPAPEDANPVWHTPL LPRVLPQESELDAFKAILDSGKKITLLCGSGCEGAHDELIQFAEKIKAPIVHALRGKEHV EWDNPYDVGMTGLIGFSSGYHAMMNADTLVLLGTQFPYRAFYPTDATIVQVDINAASIGS HCAVNLPLVGDVKSTLQALLPKLESRSDRQFLDQALEHYHKARKDLDALASANDDQPIHP QYLAQQISELASDDAVFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQAIGAQ GSFPERQVIALCGDGGFTMLMGDFLTLAQQKLPVKIVIFNNSVLGFVAMEMKAGGYLTDG TDLHNPDFAAIANAAGIKGIRVEKASELNSALAEAFAHDGPVVVDVVTAKQELAMPPQIK FEQAKGFSLYMLRAIINGRGDEVVELAKTNWLR >gi|316920349|gb|ADCU01000001.1| GENE 639 696695 - 697696 718 333 aa, chain - ## HITS:1 COG:YPO1359 KEGG:ns NR:ns ## COG: YPO1359 COG1018 # Protein_GI_number: 16121639 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Yersinia pestis # 4 333 10 340 340 443 68.0 1e-124 MTMPTPLCPNQMQVHSIHQETPDVWTISLICHDFYRYHPGQYALVSIRNSEETLRAYTLS SSPGQSKFITLSVRCLPDGEGSRWLTQEVHPGQQLWLSDAQGEFTCANAPSDRYLMLAAG CGVTPIMSMTRWLLANRPETHVQVIFNVRTPRDVIFADEWRALSAHYSQLNLTLMAESDA TEAFLSGRITREILEQLCPDIATRTVMTCGPAPYMKAVKQLSQDLGVPAERFHQEQFQVI ADNDENGNMLKLTTNNPLHTYHAPVGATLLFAMEQNKLPIQAACRAGVCGCCKTRILSGD YTTTSTMTLTPDEIAQGYVLACSCQLNGDVVIA >gi|316920349|gb|ADCU01000001.1| GENE 640 697764 - 699416 1876 550 aa, chain - ## HITS:1 COG:YPO1360 KEGG:ns NR:ns ## COG: YPO1360 COG1151 # Protein_GI_number: 16121640 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Yersinia pestis # 1 549 1 549 550 984 83.0 0 MYCVQCEQTIRTPAGNGCSFAQGMCGKTAETSDLQDLLVAALQGLSAWALKARELGIIDH NIDSFVPRAFFSTLTNVNFDSERIVGYAREALDMRDALIVACRAVDANAQVDHPLADLQL AGSDLATLRKQAEEFALNNDKAEIGDDVHGLRMLNLYGLKGAAAYMEHAHVLGQYSNDIY AEFHHYMAWLGTQPRDVDTLLNNAMGIGKMNFNVMAILDKGETDAYGHPTPSSVNVRPVA GKAILISGHDLKDLRMLLEQTEGTGVNVYTHGEMLPAHGYPELKKFKHLVGNYGSGWQNQ QTEFAKFPGPILMTSNCIIDPNVGNYTDRIWTRSIVGWPGARHLEGDDFSQIVAQAQVCE GFPYNEIEHMITVGFGRQTLLNAADTVIDLVSQKKLRHVFLVGGCDGSRAERSYFTDFAR AVPQDCLILTLACGKYRFNKLDFGTLEGLPRLLDVGQCNDAYGAIMLAVKLAETLGCGVN DLPLSLVLSWFEQKAIVILLTLLSLGVKNIYTGPTAPGFLTDNLLAILNEKFGMRSISTV EADMSEILGA >gi|316920349|gb|ADCU01000001.1| GENE 641 699629 - 700528 805 299 aa, chain - ## HITS:1 COG:YPO1361 KEGG:ns NR:ns ## COG: YPO1361 COG2431 # Protein_GI_number: 16121641 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 298 1 298 298 367 77.0 1e-101 MYSGLLIILVPLLLGYLIPLRQKSLVVLINRLLSWMVYVILFFMGISLAFLDNLSENLWL IFQYASVFFICIIVANLIALLLLEKKRPWVVPHQQEELPSRLHMALESLKLCGVVVGGFA LGLTQWAWLSYASHGSEYALIFLLLLVGLQLRNSGMSLKQILLNRRGMIIAILVCVSALV GGAIAALLLGLPVKTGLAIASAYGWYSLSGIMMTEAFGPVIGSAAFFNDLARELFAIMMI PTLVQRSRSSALGLCGATSMDFTLPVLQRSGGLELVPAAIVHGFALSLIAPVLMAIFSS >gi|316920349|gb|ADCU01000001.1| GENE 642 700752 - 702422 1271 556 aa, chain + ## HITS:1 COG:YPO1362 KEGG:ns NR:ns ## COG: YPO1362 COG3593 # Protein_GI_number: 16121642 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Yersinia pestis # 1 556 1 554 555 805 70.0 0 MYLERIEIVGFRGINRLSLTLDENTVLIGENAWGKSSLLDALTLCLSPNTDLYHFEPQDF YFPPGDETAKERYLQIIFVFCESDVGHHNAPRYRPLSSLWQDGNDRFQRIYFRQEGELCD DGTVCTWRSFLDEKGEPLKLHHVDKLAREIVRLHPVLRLRDARFIRRLRPTVIAQNRVPD QSEVAQQLDDLTRELVRNPQKLSNSELRQGLNAMQQLLEHYFAEQGQQLTNSRRRRHHSD EVHGRQAWRSLENMNQMIAESGSRNMRLILLGLFSTLLQAKGAITLDPHARPLLLVEDPE TRLHPIMLSVAWGLLNQLPLQKITTTNSGELLSLMPVERVCRLVRQSNKVATYRIGPQGM SPEDSRRIAFHIRFNRASSLFARCWLLVEGETEVWLLNELARQCGYHFETEGIKVIEFAQ CGIRPLVKFARHMGLEWHVLVDGDDAGRKYAATVRALVEHARDNERDRLTALPAPDMEHY MYREGFASVYHDIAGLPPNVPLSMRKVITKAIHRSSKPDLAISVAAQAEAWGTDSVPALI KGMFSRVLWLARGKAE >gi|316920349|gb|ADCU01000001.1| GENE 643 702494 - 703282 464 262 aa, chain - ## HITS:1 COG:YPO1363 KEGG:ns NR:ns ## COG: YPO1363 COG2990 # Protein_GI_number: 16121643 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 11 254 65 308 315 244 47.0 2e-64 MKLLNNIAAIPSCQDVLLTQPRLPCKLHHPYLNVNFKRRDTVKAIGEHYQMLDEALPNSV LRKIYRAQPYYLCEIEGKNEQLYRIGISPIDSLNKEGELSLLFYTAEGVMLSECTFTLLM HSGKKTLFIGGLQGPKQSVPHELIQTATKGCHGLFPKRLLMQALCLFAHTVGCEQILAVG NETHIYKNWRYNKKKSRKMMSDYDAFWLSIGAVSTAEGYFSLPMTIERKSLEEIASKKRA EYRRRYQLLDTLESSARVALGR >gi|316920349|gb|ADCU01000001.1| GENE 644 703829 - 704050 227 73 aa, chain - ## HITS:1 COG:STM0943 KEGG:ns NR:ns ## COG: STM0943 COG1278 # Protein_GI_number: 16764305 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Salmonella typhimurium LT2 # 1 73 1 73 73 124 80.0 4e-29 METGTVKWFNNAKGFGFICPLKGGEDIFAHYSSIQMEGYRTLKAGQQVQFNVQEGPKGNH ANTIVPIESEMTA >gi|316920349|gb|ADCU01000001.1| GENE 645 704626 - 704949 221 107 aa, chain + ## HITS:1 COG:YPO1367 KEGG:ns NR:ns ## COG: YPO1367 COG2127 # Protein_GI_number: 16121647 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 106 1 106 106 189 86.0 1e-48 MANQNDWLNFEQLADSKQIDEVKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDIERATQ LMLTVHYKGKAICGVFTAEVAETKVAHVNRYARENEHPLLCTLEKAG >gi|316920349|gb|ADCU01000001.1| GENE 646 704976 - 707252 1368 758 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 10 753 14 815 815 531 38 1e-149 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPAAREALEACSVDLAALRQELET FIEQTTPTLPNGEAERDTQPTLSFQRVLQRAVFHVQSSGRNEVSGANVLVAIFSEQESQA AYLLRKHDVSRLDIVNFISHGTRKDETGQAPNAENPASEEPASGEDRMENFTTNLNQLAR VGGIDPLIGRDKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA DCTLYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTDSILFIDEIHTIIGAGAASGGQV DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPTPDETVQILNGL KPKYEAHHDVRYTAKAIRAAVELSVKYINDRHLPDKAIDVIDEAGARSRLMPVSKRKKTV NVADIESVVARIARIPEKTVSASDRDVLKSLGDRLKMLVFGQDKAISALTEAIKMSRAGL GQDHKPVGSFLFAGPTGVGKTEVTVQLAKALDIELLRFDMSEYMERHTVSRLIGAPPGYV GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVIL VMTTNAGVRETQRKSIGFAQQDNSTDAMEEIKKVFTPEFRNRLDNIIWFNHLSTEIIQQV VDKFIVELQAQLDAKGVSLEVSEAARLWLAEKGYDHAMGARPMVRVVQENLKKPLANELL FGSLVDGGSVTVDLSEDKQQLTYEFCSAQKRKAEDALH >gi|316920349|gb|ADCU01000001.1| GENE 647 707433 - 707651 261 72 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 70 1 70 72 105 67 6e-21 MAKEDNIEMQGTVLDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPY DLSKGRIVFRSR >gi|316920349|gb|ADCU01000001.1| GENE 648 707747 - 708478 391 243 aa, chain - ## HITS:1 COG:YPO1371 KEGG:ns NR:ns ## COG: YPO1371 COG2360 # Protein_GI_number: 16121651 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Yersinia pestis # 1 229 1 229 236 320 65.0 1e-87 MRIMQLDRQSTLFPPTDLALREPNGLLAIGGDLRPARLLAAYESGIFPWFTPGDVILWWS PDPRAVLFPHELHISRSMAKFLRRQRFTVTINQAFSEVIRECAEQRDEGTWIGEDVQQAY VKLHELGHAHSVEVWQEDRLVGGLYGVLQGSLFCGESMFSRATNASKTALIAFCGHFVSF GGTLIDCQVLNAHTESLGARNIPRSDYLHHLRIDQKKVINPACWKPQTIISREFAIKPHQ NCP >gi|316920349|gb|ADCU01000001.1| GENE 649 708547 - 710268 245 573 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 355 554 16 221 245 99 34 4e-19 MRVLLPFLALYRRHWFLISLGVVLAIVTLLASIGLLMLSGWFLAASALAGLAGLLTFNYM LPAAGVRGAAIIRTAGRYAERVVSHDATFRVLSHLRVFTFSKILPLSPGAIARFRQAELL NRLVADVDTLDHLYLRVISPLISAIVVIIVVTAGLAWFDPALAFTLGGIMLLLLFCLPLG FYQAGKPVGMALTGLRADYRTLLITWVAGQAELAIYGAADRFRQALDAKEQAWQLQQKKQ ASLTGAAQALMILASGLTFTLLLWLAAGGVGQYAQPGALIALFVFSSLAAFEALAPVAGA FQHLGQVTASATRVAQMINQKPEVTFPLSGPTISDQIAVTVDNVTFNYPNQPVSVLNDIS LTVKAGEKIALLGRTGCGKSTLLQLITRAWDCSQGEIRLNNTPLTAFDEATLRQVTGVVS QRVHVFSSTLRDNLKIANDAATDPELKNVLEQVGLGKLLDDAGLNAWLGDGGRPLSGGEQ RRLGIARALLHRSPLLLLDEPTEGLDAETEKQILALIMNHCQHKTLILITHRLQGLDKMD RVCVMENGRIVEQGHHTALMAEKGRYYQLCQRL >gi|316920349|gb|ADCU01000001.1| GENE 650 710271 - 711962 1351 563 aa, chain - ## HITS:1 COG:YPO1373 KEGG:ns NR:ns ## COG: YPO1373 COG4988 # Protein_GI_number: 16121653 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components # Organism: Yersinia pestis # 11 563 44 594 594 751 73.0 0 MILGLISGLLIVAQSWLLAKLLHDLIIEQVPRQTLLAPFSLLIGAIVLRAALSWLRERVG FKCGQIVRVQIRSLVLNRLDELGPAWIQGKPAGHWATLILEQIEDMQEFYSRYLPQMYLA TMIPLLILITVFPINWAAGMILLVTAPLIPLFMALVGMGAADANRRNFLALGRLSGNFLD RLRGLDTLRLFNRAAAETENIRRASEDFRSRTMEVLRMAFLSSAVLEFFTSISIAVVAVY FGFSYLGELNFGSYGTSVTLFAGFLVLILAPEFFQPLRDLGTFYHAKAQAVGAAESLVTF LAEDAESPQQGKGQDVLAGTQPVTIVANELEVLSPQGKILAGPLSFTIDAGQRIALVGFS GAGKSSLINVLLGFLPYRGSLTVDGKELRSLSQSQWRLQLGWVGQNPNLPESTLRANVLL GAPQATEAQLHTVLERAYVTEFLPLLAHGIDTEIGEGAARLSVGQAQRVAVARALLRPCR LLLLDEPTASLDAHSEQLVMQALEQASHQQTTLMVTHQLDDVSRYDQIWVMDNGQLVQRG SYAQLSQHSGPFADLLATRSKEL >gi|316920349|gb|ADCU01000001.1| GENE 651 712273 - 713172 388 299 aa, chain - ## HITS:1 COG:BMEI0218 KEGG:ns NR:ns ## COG: BMEI0218 COG0583 # Protein_GI_number: 17986502 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Brucella melitensis # 4 296 16 308 308 160 32.0 2e-39 MKNINWDDLRYFLSVARTGSLTGSAAELQVSQSTVSRRISALEQDLNTTLFARHATGYFL TDQGRDVLRKVSAVEDSITALHIGLADLDANTEGTIRLATPESLAVNMIIPSLPEFISRY PKLRLEIISGVGVADLSRYEADLAIRLVRPQSGNLIMQRLGTMNSAIYASADYLQRHPAP SSDPTSGRAFIIWDRAYSHLPTASWLAKQGYDANPALITSSVAEQYAAAKSGIGLALLPS FLVAHDADMIEVIPNNQVFSEDLWLTTHADLRSSVRIRAISEFLKELIARYQPAFSDLA >gi|316920349|gb|ADCU01000001.1| GENE 652 713301 - 714584 925 427 aa, chain + ## HITS:1 COG:AGl27 KEGG:ns NR:ns ## COG: AGl27 COG3631 # Protein_GI_number: 15890112 # Func_class: R General function prediction only # Function: Ketosteroid isomerase-related protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 18 143 12 137 137 108 38.0 1e-23 MTTPSSTASTTMSSHFSVIHRYFAAFGSGNIDAALALMTDDVIWHIDGELSVSTVGILRG REQVRGWLEAFPSDFKPQKFTVSQLFESGDTVLALGRFRHTVLTTGNIIGSDYVIRFEMR EGLIAHYQIFEDSALLARAFDPADRFEQQRIRINGNVYAYTDVGTGPTIIFAHGLFLDRS SFDQQVAVLSQNYRCIVLDMPGHGESGVFPPQWTLDDMANDIALLVQVLALGKVILVGQS QGGMMGIRLAALHPDVVSHLILVGTSARAEFAERITYWNHLLHIVSQGAETERMAAFEAV QKRLCPAQWLSDNPELAKHEIDIMLSHDRVGIAHAIAAATINRTDVRDLLKKITIPTFVV CGEQDQATPLMLSQEMADLIPNATLHVLAHVGHHPQLEEGVALLSAMERFLHDKDEYERK ISVRTGR >gi|316920349|gb|ADCU01000001.1| GENE 653 714645 - 715613 711 322 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 10 316 5 306 306 278 47 4e-73 MGTVKHSKLLILGSGPAGYTAAVYAARANLNPVLITGVEKGGQLTTTTEVENWPGDPEGL TGPLLMERMHEHAAKFNTEIILDNIERVDLQTRPFRLFGGSQEYTCDALIIATGASAQYL GLPSEEEFKGRGVSACATCDGFFYRQQEVAVIGGGNTAVEEALYLSNIASKVHLIHRRDT FRAEKILIARMMDKVASGNIVLHTNRTLDEVLGDPMGVNGLRLKATDSDKTEQLSVTGLF VAIGHKPNTAIFEGQLALENGYIKVQSGLGGNATQTSIPGVFAAGDVMDHIYRQAITSAG TGCMAALDAERYLDGLAAASHQ >gi|316920349|gb|ADCU01000001.1| GENE 654 716438 - 716932 535 164 aa, chain + ## HITS:1 COG:ECs0974 KEGG:ns NR:ns ## COG: ECs0974 COG1522 # Protein_GI_number: 15830228 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 310 98.0 1e-84 MADNKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQG YTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTR VPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR >gi|316920349|gb|ADCU01000001.1| GENE 655 717244 - 720885 2899 1213 aa, chain + ## HITS:1 COG:YPO1376 KEGG:ns NR:ns ## COG: YPO1376 COG1674 # Protein_GI_number: 16121656 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Yersinia pestis # 1 1212 38 1305 1305 1250 58.0 0 MVSLLSFDPSDPSWSQTAWHEPINNIGGGAGAWLADTLFFVFGVMGYAIPPVMLALCWFA YRKRDDSGYVDYFAISLKLIGMLALVLASCGLTALNVDDIYHFASGGLIGSLLENGVNPL MGSVGGTLLLLGVWAVGLTLFTGWSWLTIAEKIGGVLLGGLTFMSNRSRRDRDDDYDYED DAREVVLDKHASSVAQETDDVLLRAADEDEDDILLAKPTRTAPELPSVDEDENDPLLGKL RPLHEAEMSLDESAQPAVSHELKPAAAVSAVGAAVASAQPVASAATQPMTFSASEPEPVA EIKPSMPPLYSFEIPEDRPTNVSHTPTRPARSAWDDEGPRLGSLEPETPSTPSTAPGMNF SASHFDRDELPKTPYINPGLSSNSMPFGAASRDDTVPTTVSTAAAAGALFMPAFSATEDS SLQVKQGNGPELPRPNPVRIPTRRELASLGIKLPSQRMAEEQAKKEAEAQRLRAQQSPQQ SLEQNLEQNNVEPVDDEALREQTALRQAFAEQQQQRYGEQQYEHQAEDEQAAEMARLQSE FSSQQQQRYQQQADATDDNSYALSGVTASRNDLMDFSPAKALSEAAASNNAFGFTPVADL VDDGPSEPLFTITPEQEETAARDSDAYDVPFGRYDEPVQPSQPQSYQQPAASQYSQQPAP VQPNVYQQPPAAPVTPQPSIQQPNAQQPVAQQSTGQHPAMDGLIHPFLMRGHEQPLEKPT TPLPTLDLLTEPPANSEPVDMFALEQVGNLVESRLADYRVKAEVVGISPGPVITRFELDL APGVKAARISNLSRDLARSLSAVAVRVVEVIPGKPYVGLELPNKHRQTVYLREVLDCSKF RESPSPLTIVLGKDIAGQPVIADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKATPDEV RFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVGEMERRYKLMSALGVRNLAG YNERVEQAIAMGRPIPDPFWKPGDSMDMTPPVLEKLPYIVVLVDEFADLMMAVGKKVEEL IARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQGGAES LLGMGDMLYMPPNSSMPVRVHGAFVRDEEVHAVVQDWKARGRPQYIDSILSSSEDGEGGL GLDSDEELDPLFDQAVAFVVDKRRASISGVQRQFRIGYNRAARIVEQMEAQGIVSSPGNN GNREVLAPPSHDM >gi|316920349|gb|ADCU01000001.1| GENE 656 721177 - 721788 565 203 aa, chain + ## HITS:1 COG:YPO1377 KEGG:ns NR:ns ## COG: YPO1377 COG2834 # Protein_GI_number: 16121657 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Yersinia pestis # 1 202 1 202 202 296 74.0 1e-80 MKKLLLACCLVTGFASTAVQASPTSDLQSRLDKVNSFHSSFTQTVTTADGAAVQQGEGEL WVKRPNLFNWHMTSPDESVLVSDGKTLWFYNPFVEQVTATWLDSATSNTPFMLITRNDAK EWNQYNVKQTGDTFDLTPKSQKNNLKKFTISVSPTGTINSFTAVEQDGQSSAYKLKSQQS GVVDASKFQFTPPKGVTVDDQRQ >gi|316920349|gb|ADCU01000001.1| GENE 657 721817 - 723160 1265 447 aa, chain + ## HITS:1 COG:YPO1378 KEGG:ns NR:ns ## COG: YPO1378 COG2256 # Protein_GI_number: 16121658 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Yersinia pestis # 1 447 1 447 447 800 89.0 0 MSNLSLDFSQNEFQPLAARMRPETLKQYIGQRHLLAVGKPLPRAIEAGHLHSMILWGPPG TGKTTLAELIGRYGNADVERISAVTSGIKEIREAIERARHNRDAGRRTILFVDEVHRFNK SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKALTSDDIIEVLNQAMAD KERGYGGQNIVLPDDTRNMIAELVGGDARRALNTLEMMADMAEVDASGNRVLTPNLLKEV SGERSARFDNKGDRFYDLISALHKSVRGSSPDAALYWYARIITAGGDPLYVARRLLAIAS EDVGNADPRGMQVAISAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALHDA KERPDYDVPDHLRNAPTKLMKEMGLGAEYRYAHDETHAYAAGEVYFPPEMSQTRYYVPTN RGLEGKIGEKLAWLAEQDQNSPTKRYR >gi|316920349|gb|ADCU01000001.1| GENE 658 723269 - 724561 1290 430 aa, chain + ## HITS:1 COG:YPO1379 KEGG:ns NR:ns ## COG: YPO1379 COG0172 # Protein_GI_number: 16121659 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Yersinia pestis # 1 430 1 430 430 782 90.0 0 MLDPNLLRNELDAVAEKLARRGFKLDVDTLRQQEERRKVLQVETESLQAERNSRSKSIGA AKARGEDIEPLRLEVNELGEKLDAAKSELDQLLNDIRDLALSIPNMPDDSVPVGRDENDN VEVSRWGEPRTYDFDVRDHVTLGEMTGGLDFAAAVKLTGARFVVMKGQIARMHRALAQFM LDLHTEQHGYLETYVPYLVNHDTLYGTGQLPKFGGDLFHTRPLEEEADSSTYALIPTAEV PVTNLVRGEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVRPED SMDALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSSKTYDLEVWVPAQNTYREISSCS NMWDFQARRMQARCRNKTDKKPRLVHTLNGSGLAVGRTLVAVLENYQQADGRIQVPEVLR PYMNGLEYIG >gi|316920349|gb|ADCU01000001.1| GENE 659 724673 - 724849 69 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSINTRRTQAQVVYVMQLTAFQNHKLTFENANQLAIGIDKEANRLTRNNSHDIEIERG >gi|316920349|gb|ADCU01000001.1| GENE 660 725096 - 727540 1917 814 aa, chain + ## HITS:1 COG:YPO3325 KEGG:ns NR:ns ## COG: YPO3325 COG0243 # Protein_GI_number: 16123478 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Yersinia pestis # 1 814 1 816 816 1433 83.0 0 MKNTKETGLLSTQVSRRKLVKSSAIGGLVAASGGLSLPFARKAAAQSGTTSLGKDEKVIW SACTVNCGSRCPLRMHVVDGEIKYVETDNTGDDNYEGLHQVRACLRGRSMRRRVYNADRL KYPMKRVGARGEGKFKRISWEEAFDTIAASMQHIIKDYGNEAIYLNYGTGTLGGTMTRSW PPGATLIARLMNCCGGYLNHYGDYSTAQIAEGLNYTYGGWADGNSPSDIENSKLVVLFGN NPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTDTGAGREDEWVPIRPGTDAALASAL AHVMITEDLVDQAFLDKYCVGYDEKTMPEGAPANGHYKAYILGLGADGVAKTPEWAAAIT GIPADKIIKLAREIGAAKPAYISQGWGPQRHSNGELASRAISMLAILTGNVGIHGGNSGA REGSYSLDFVRMPTLENPVKTSISMFMWTDAIVRGPEMTATRDGVRGKDKLDVPIKMIWN YAGNCLVNQHSEINRTHDILQDDKKCEMIVVIDNHMTASAKYADILLPDCTASEQMDFCL DASAGNMSYVIFADQVIKPRFECKNIYEMTSELAKRMDVEAQFTEGRTQEEWLRHLYQQS QQAMPGLPSFDDFRQQGIYKQRDPEGHHVAYKAFREDPVANPLTTPSGKIEIYSTQLAEK AATWELAKGDVIDPLPIYSAGFEGYDDPLVEKFPLQLTGFHYKARTHSTYGNVDVLKAAC RQEMWINPIDAKQRGIVNGDIVRIFNQRGEVRINAKVTPRMMPGVVALGEGAWYSPDANR VDHAGSINVLTTQRPSPLAKGNPSHSNLVQVTKA >gi|316920349|gb|ADCU01000001.1| GENE 661 727551 - 728168 410 205 aa, chain + ## HITS:1 COG:YPO3324 KEGG:ns NR:ns ## COG: YPO3324 COG0437 # Protein_GI_number: 16123477 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Yersinia pestis # 1 205 1 205 205 384 90.0 1e-107 MTTQYGFYIDSSRCTGCKTCELACKDFKNLTPDVSFRRIYEYAGGDWQEDNGVYHQNVFA YYLSISCNHCSDPACTKVCPSGAMHKREDGFVVVNEEVCIGCRYCHMACPYGAPQYNEEK GHMTKCDGCYERVAEGKKPICVESCPLRALDLAPIEELRAKYGDLAEVAPLPAAHFTKPN IVLKPNANSRPVGDTTGYLANPKEV >gi|316920349|gb|ADCU01000001.1| GENE 662 728170 - 729030 870 286 aa, chain + ## HITS:1 COG:YPO3323 KEGG:ns NR:ns ## COG: YPO3323 COG3302 # Protein_GI_number: 16123476 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Yersinia pestis # 1 286 1 286 286 311 71.0 1e-84 MGMGWHEWPLMIFTVLGQCVVGAFIIMALALIAGRLDEVLTRRVHVSMFFLWVLMGIAFI ASVMHLGSPMRAFNSLNRIGESALSNEIASGSVFFAAGGIYWLLAMLNKMPAALGKLWLA ITMVLGLLFVYAMCRVYQIDTVPTWHNGYTTLGFVLTMLIGGPLLGFLLLRAAGVLGCSM RLLPVISVLAVLVSVAAVAMQGFGLAEIHSSVQQASALIPAFGTLLAWRLALLVLGLGCW ICPMIKGKTPSVAWLVIGFALVVAGELIGRGMFYGLHMTVGMAVAG >gi|316920349|gb|ADCU01000001.1| GENE 663 729144 - 729758 630 204 aa, chain + ## HITS:1 COG:YPO3322 KEGG:ns NR:ns ## COG: YPO3322 COG3381 # Protein_GI_number: 16123475 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Yersinia pestis # 3 204 19 236 236 209 53.0 3e-54 MLQPQQLQDIAISARSLGALFYYSPESETCAPLVDILTSSEWISEWPYGSMQQLEQCAAK LAAMTDESLTDAHQRLFIGPYALPAPPWGSVYLDKESVLFGDSTLALRQWMREHLIEGQI GQKEPEDQFGLMLMMAAWLAESQPQALSDFLSVHLLPWSTRYLTLMMQDARHPFYQGLSE LALLTLASWQQQLAIVPAERELYR >gi|316920349|gb|ADCU01000001.1| GENE 664 729758 - 730345 73 195 aa, chain + ## HITS:1 COG:HI1043 KEGG:ns NR:ns ## COG: HI1043 COG1145 # Protein_GI_number: 16272975 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Haemophilus influenzae # 5 182 2 165 166 116 38.0 2e-26 MSEQKDQDYYRAWMSHHIVSRRGLFRGLLCAGKRAQQQVELESVRRAIGRPPQAVAERLF LALCTACGDCITACPYGLIEIKDGAAALQIDFSACDTAKCNDCTTSCKTGALSPLILSDT ALRPLFAKGCIGRGNHDCRLCERACSSHAIYFDDYAQPTFAESLCDGCGQCKTACYHGHI SLVAGSPKLANLSER >gi|316920349|gb|ADCU01000001.1| GENE 665 730420 - 731601 795 393 aa, chain + ## HITS:1 COG:YPO1380 KEGG:ns NR:ns ## COG: YPO1380 COG0477 # Protein_GI_number: 16121660 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 15 393 1 381 382 470 69.0 1e-132 MMRPLLNAVRFEIQMSSYSRPVLLLLCGLLLLTVAMAVLNTLVPLWLSHEQLPTWQVGLV SSSYFMGNLVGTLVAGAVIMHSGFNRSYHYACAIFALSTAALSFSTDIWSWLALRFLAGV GCAMVWVVVESALLRSGTNANRGQLLAAYMTVYYLGTVLGQLMLGVVPTAVMQVLPWATS LMVLAIMPLLFARFARPESHASVPMWAMLRRRSARLGIHGCVISGAVLGSLYGLLPLYLA HKGMSDANVGLWMALLVSAGIMGQWPIGRLADRFGRISVLRVQVSVVILGCMAMLGNYGV VPALFTLGCAGFTLYPVAMSWACETAAPHELVAMNQALLMSYTIGSLAGPATVAALMQQY SDDVLFVMIAGIALVYLLMLMKKTDHHHALPAA >gi|316920349|gb|ADCU01000001.1| GENE 666 731673 - 732128 394 151 aa, chain - ## HITS:1 COG:no KEGG:NT01EI_2470 NR:ns ## KEGG: NT01EI_2470 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 146 1 146 150 222 73.0 3e-57 MSIDAILDQRWQFCHQPLSWRHAIHLACQPLISESKVNASYPLHIIDALKQDKQDFVVSE GVLLVFAQPEQGVISKRGEASVLKCDKPVVLQNGSEVSLIIVLSAGTQSELNSLHQQIEG WLEMNNCREHLMQVTSQNMLGSRIQAGSRMH >gi|316920349|gb|ADCU01000001.1| GENE 667 732798 - 733538 749 246 aa, chain - ## HITS:1 COG:STM0970 KEGG:ns NR:ns ## COG: STM0970 COG1180 # Protein_GI_number: 16764330 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Salmonella typhimurium LT2 # 5 246 33 274 274 478 91.0 1e-135 MSLKGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGTEITVEDLMKDV VTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKEEGIHTCLDTNGFVRRYDPVIDEL LDVTDLVMLDLKQMNDDIHQNLVGVSNHRTLEFARYLAKRNQKTWIRYVVVPGWSDDDAS AHLLGDFTKDMTNVEKIELLPYHELGKHKWEAMGEEYKLGGVKPPSHETMERVKNILESY GHKVMY >gi|316920349|gb|ADCU01000001.1| GENE 668 733824 - 736106 2363 760 aa, chain - ## HITS:1 COG:YPO1383 KEGG:ns NR:ns ## COG: YPO1383 COG1882 # Protein_GI_number: 16121663 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Yersinia pestis # 1 760 1 760 760 1477 93.0 0 MSELNEKQAAAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATQATTNLWDKVMD GIKIENRTHAPVDFDTNVAATITSHDAGYISKDLEQIVGLQTDAPLKRALIPFGGIKMVE GSCKVYGRELDPMIKKIFTEYRKTHNQGVFDVYTKDILNCRKSGVLTGLPDAYGRGRIIG DYRRVAVYGIDFLMKDKYAQFQSLQTKLENGEDLEATIRLREEIADQHRALGQIKEMAAK YGCDISGPAKNAKEAVQWTYFGYLAAVKSQNGAAMSFGRVSSFLDIYIERDLKEGKLTEE EAQELIDHLVMKLRMVRFLRTPEYDELFSGDPIWATESLAGMGLDGRTLVTKNSFRFLNT LYTMGPSPEPNMTILWSEKLPLAFKKFAAKVSIDTSSVQYENDDLMRPDFNNDDYAIACC VSPMIVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKEAPMMDTVLDYDKVMERM DHFMDWLAKQYVTALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVAADSLSAI KYAKVTTIRDEDGLAVDFDVEGEYPQFGNNDPRVDDIACDLVERFMKKIQKLTTYRNAVP TQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYA KDGISYTFSIVPNALGKDDEVRKANLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAM ENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQSM >gi|316920349|gb|ADCU01000001.1| GENE 669 736169 - 737026 737 285 aa, chain - ## HITS:1 COG:YPO1384 KEGG:ns NR:ns ## COG: YPO1384 COG2116 # Protein_GI_number: 16121664 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Yersinia pestis # 1 285 1 285 285 474 87.0 1e-134 MKADNPFDLLLPAAMAKVAEDAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTA GVPFGFAKLVGGICFSLGLMLVVVCGADLFTSTVLIVVAKASGRITWKQLGLNWLNVYVG NLIGALFFVALMWFAGEYMTANGAWGLNVLQTADHKLHHTFVEAVCLGILANLMVCLAVW MSYSGRSLMDKMFAMVLPVAMFVASGFEHSIANMFMIPLGIVIKNFAAPEFWQAVGAAPE QFSNLTVSHFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRGGDKH >gi|316920349|gb|ADCU01000001.1| GENE 670 737569 - 739362 1890 597 aa, chain - ## HITS:1 COG:YPO1385 KEGG:ns NR:ns ## COG: YPO1385 COG1944 # Protein_GI_number: 16121665 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 12 597 1 586 588 1015 84.0 0 MPFFAANQVTQMTQTYIPGKDAALEDSIARFQQQLTDLGFNIEEASWLNPVPHVWSVHIR DRDCPLCFTNGKGASKKAALASALGEYFERLSTNYFFADFYLGREIAEGDFVHYPNEKWF PIPADDSLPEGILDERLHAFYNPEGDVGAQDLIDLQSGNVDRGICALPFTRQSDQQTVYI PMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPAEVLNRYPE VVEAIAKLEQEGFPILSYDASLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVT ELLQGRSLKDLDVFTAPTFDDEEVGEHANLETHFIDSSGLISWDMFKQDADYEFADWSFK GTTEEEFSTLMNIFEQEDKEVYIADYEHLDVYACRIIVPGMSDIYPAEDLLLANNSMGAH LRTQLLQLPASNLSKEEYLQIIEQLDDEGLDDFTRVRELLGIATGKDNGWYTLRVGELKA MLALAGGDLEQALIWTEWTQDFNASVFSPERANFYRCLQTLLLLSMEEERDPAQYYQAFS RMYGSETLEAASAVIAGEERFYGLPAVDDDLKALPAHQALLQAYQKLQAAKRRYWDK >gi|316920349|gb|ADCU01000001.1| GENE 671 739474 - 740520 1064 348 aa, chain + ## HITS:1 COG:ECs3833 KEGG:ns NR:ns ## COG: ECs3833 COG0252 # Protein_GI_number: 15833087 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 1 348 1 348 348 553 87.0 1e-157 MKLVKVSLLALLVSGFSGAAFALPNVTILATGGTIAGGGDSATKSNYTAGKVGVESLVDA VPQLKDIANIKGEQVVSIGSQDMNDDVWLKLAKKINADCNKTDGFVITHGTDTMEETAYF LDLTVKCDKPVVMVGAMRPSTAMSADGPFNLYNAVVTAADPASAKRGVLVAMNDTVLDGR DVTKTNTTGVQTFQAVNYGPLGYIHNGKVDYQRAPERKHTTQTPFDVSKLTSLPKVGIVY NYANASDLPAKALLEAGYQGIVSAGVGNGNLYKSIFDTLATAAHNGVAVVRSSRVPSGST TEDAEVDDVKYGFVASGTLNPQKARVLLQLALTQTKDPKQIQQMFNQY >gi|316920349|gb|ADCU01000001.1| GENE 672 740616 - 741308 224 230 aa, chain + ## HITS:1 COG:ECs0989 KEGG:ns NR:ns ## COG: ECs0989 COG2323 # Protein_GI_number: 15830243 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 229 1 229 230 289 62.0 3e-78 MQSFDLKRMAFDKAPPDFLAEVAVRCLFTFLLVFLFLKMTGRRGVRQMSLFEVIVILTLG SAAGDVAFYDDVPMLPVLTVFICIMLLYRLSTLLMSKSEKIQTWMEGKPLVIISDGTLVW DTIKRENITHDEFFMELRLEGVEHLGQVRLAILEVNGAISVYFFDEESVRYGLPVLPNTC ITKLNKICEPGKYACSECSLIEYLADIRQPTCSRCGNHSWVKAYNNRRVN >gi|316920349|gb|ADCU01000001.1| GENE 673 741621 - 742709 991 362 aa, chain + ## HITS:1 COG:YPO1389 KEGG:ns NR:ns ## COG: YPO1389 COG1932 # Protein_GI_number: 16121669 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Yersinia pestis # 1 362 1 361 361 632 81.0 0 MTQVYNFSAGPAMLPVEVLRRAEQELCNWNGLGTSVMEISHRGKEFMQVAAQAEQDLRSL MNVPDNYKVLFCHGGARAQFAAVPLNLLGDKTAADYMDGGYWAHSAVKEAQKYCTPHVFD ITTTDAQGLQAIKPMREWVLQDDSAYVHYCPNETIDGIAIDEEPDFGDKIVVADLSSTIL SRPIDVSRYGVIYAGAQKNIGPAGITVVIVREDLLGKARKELPSILDYTVLAENDSMFNT PPTFAWYLSGMVFKWLKEQGGLVEMEKRNKAKADLLYSAIDRSDFYRNGVAPQNRSRMNV PFQMANPALDPVFLQEAKATGLQALKGHRVAGGMRASIYNAMPIEGVKALTDFMADFERR HG >gi|316920349|gb|ADCU01000001.1| GENE 674 742864 - 744144 1030 426 aa, chain + ## HITS:1 COG:YPO1390 KEGG:ns NR:ns ## COG: YPO1390 COG0128 # Protein_GI_number: 16121670 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Yersinia pestis # 1 426 1 426 428 699 81.0 0 MLDSLTLQPIEHFSGEINLPGSKSVSNRALLLAALASGTTCLHNLLDSDDVRHMLTALKQ LGIHFQLSDNHTRCEITGNGGVLQAKSPLELFLGNAGTAMRPLAAALCLGDSDIILTGEP RMKERPIGHLVDALRQGGAQIDYLEQENYPPLRLRGGYIGGDIEVDGSVSSQFLTALLMM APLAQHDTVISIKGDLVSKPYIDITLALMHTFGVNVENENYQTFRIAGGQGYVSPGDYLV EGDASSASYFLAAAAIKGGTVRVTGIGKNSVQGDIRFADVLEKMGAKITWGDDFIECTRG ELHGIDMDMNHIPDAAMTIATTALFADAPTTIRNIYNWRVKETDRLSAMATELRKVGAEV EEGEDYIRVVPPVHLKVAEIGTYNDHRMAMCFSLIALSDTPVTILDPKCTAKTFPDYFQQ FERLSH >gi|316920349|gb|ADCU01000001.1| GENE 675 744480 - 745202 267 240 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 3 226 17 278 863 107 30 1e-21 MDRCFPKKERKMTAIAPVITVDGPSGAGKGTLCKALAESLGWCLLDSGAIYRVLALAALH HQVDITSEEALVPLAAHLDVRFVAQNGQLQVILEGEDVSNEIRTESVGSTASQAAAFPRV REALLRRQRAFREFPGLIADGRDMGTVVFPDAPVKIFLDASSEERARRRMLQLQEKGFSV NFDRLLDEIKERDYRDRNRAVAPLVPAQDALMLDSTQMSIEQVIEKALAYAKQTLHLPAE >gi|316920349|gb|ADCU01000001.1| GENE 676 745424 - 747103 2737 559 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157369952|ref|YP_001477941.1| 30S ribosomal protein S1 [Serratia proteamaculans 568] # 1 559 1 559 559 1058 96 0.0 MTESFAQLFEESLKTIETRPGSIVRGVVVAIDKDIVLVDAGLKSESAIPAEQFKNAQGEL EIQVGDEVDVALDAVEDGFGETQLSREKAKRHEAWITLEKAYEEAATVTGVINGKVKGGF TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKSNPWQLFAET HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL QVDAERERISLGVKQLAEDPFNNYISMNKKGVIVTGKVTAVDAKGATVELADGVEGYLRA SEASRDRVEDATLVLNVGDEVEAKFTGVDRKNRVVSLSVRAKDEADEKDAIATVNSNKQE DAPNFSNAMAEAFKAAKGE >gi|316920349|gb|ADCU01000001.1| GENE 677 747189 - 747473 245 94 aa, chain + ## HITS:1 COG:STM0982 KEGG:ns NR:ns ## COG: STM0982 COG0776 # Protein_GI_number: 16764342 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Salmonella typhimurium LT2 # 1 94 1 94 94 164 92.0 3e-41 MTKSELIERLASQQPHLPAKAVEDAVKEMLEHMATTLADGERIEIRGFGSFSLHYRAPRV GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYA >gi|316920349|gb|ADCU01000001.1| GENE 678 747722 - 749995 346 757 aa, chain + ## HITS:1 COG:YPO1394_2 KEGG:ns NR:ns ## COG: YPO1394_2 COG2333 # Protein_GI_number: 16121674 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Yersinia pestis # 497 757 20 285 285 266 47.0 9e-71 MRITLDESLQYIAFGCVSLMFLPSIPALPLVYGLLPVAVIIVFHHSAMVFKAALITLGVV WGISCAQRVLEPLQYPINHAANYTGEVISVALDSVSLQEKVVFRVAAINGTSVRHRFDTT LFWDSVHNPFCSGQRWSLVANLRPVHGRLNQGGYDAQRNSVSHHIVLQGAPTAYEKLSHE CSWRQKMISQTLSVVPDTPSKSIIIALAFGERALLTDSQNSLFRMSGLSHLLAISGLHIA LAAMLGWYGARTLQWCFPLRWIHPYFPLFMMVSVGGVYVWLAGANPPAVRVGGAMVIIAG YRCFGRFISPRKSLFSVVCLMVVCEPLLLLSDSFWLSVIAVTSLLFWYWFAPLPARFTIA KRYIGLRLLHLQLGIALCLMPVQIYLFHGVSGGALWANFIAVPLVTYLVVPMILLGLATL WGADPFDAWHVAGFLLDRMQWVLAHLPTLWVDMSERDVWISLSVLMLFIAVRSFSKRGLL LWGLVQISVFLAFVSMQKTSEDEWRVHMFDVGHGLSIAIERQGRALLYDTGNKWEGGDVA SSEIIPYLRWHGLALDGIIISHRDSDHSGGRTSLQQAFPSAWVRSPDFKDFACYIGSRWQ WQGINFTVLWPPRAVSEPKNNDSCVILVERRGRKLLLTGDIEKETEVKIVQRWRERLVAD VLQVPHHGSNTSSSSLLLRTIKPENALSSSARYSPWHFPSPKVVERYRGQQVKWHDTAHS GEVIMTVKPSGWRISELKTQLNPRWYHGWFGVRGHNE >gi|316920349|gb|ADCU01000001.1| GENE 679 750032 - 751780 200 582 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 342 568 12 233 312 81 28 7e-14 MLNDKDLSTWQTFRRLWPSISPFKAGLIVASIALVINAGSDAYMLSLLKPLLDDGFGKTG TDILKWMPFVVIGLMIVRGISSFISSYCVSWVAGKVVMNMRRRLFSHMMGMPVSFFDQQS TGTLLSRITYDSEQVASSSSDALITVVREGASIIALFCMMFYYSWQLSLILIVIAPVVSI AIRMVSKRFRNISKNMQNTMGTLTTSAEQMLKGHKEVLIFGGQKVESKRFDKTSNWMRQQ NMKMVAASSVSDPVIQLIASFALAFVLYAASVPSVMETLTAGTITVVFSSMIALMRPLKS LTNVNAKFQRGMAACQTLFAILDLEQEKDTGKLEVERAKGDVEFRNVTFSYNGKGAPALK NVSFKIPANKTVALVGRSGSGKSTIANLLTRFYDIQEGEILLDGHDLREYTLSSLRNQVG LVSQNVHLFNDTIANNIAYARNEVYSREQIEEAARMAYAMDFIEKMENGLDTVIGENGVL LSGGQRQRIAIARALLRDSPVLILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLS TIEKADEIIVVEDGYIAERGDHATLLAKNGAYAQLHRLQFGQ >gi|316920349|gb|ADCU01000001.1| GENE 680 751777 - 752763 581 328 aa, chain + ## HITS:1 COG:lpxK KEGG:ns NR:ns ## COG: lpxK COG1663 # Protein_GI_number: 16128882 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Escherichia coli K12 # 1 323 1 324 328 445 67.0 1e-125 MIERIWSGQSPLYLLLLPLSWLYGLVSGIRQLCYRAGWLKRWKAPCPVVVVGNLTAGGNG KTPVVIWLVEQLQAKGLRVGVVSRGYGGRSEHYPLLLDKETSTAQAGDEPVLIYQRTGAT VAVAPKRSDAVKAILEHAVIDVIITDDGLQHYALARDIELVVVDGVRRFGNGWWLPAGPM RERAGRLRSVDAVITNGGQAAAGEIPMKLAGSTLVNIQTGDRCAADSLMPAVAMAGIGHP PRFFATLNQLGTTVTNCVAFADHQEYDAAALNALTPESQPLIMTEKDAVKCRKFAQSNWW YLPVSAEIPSEQGNELLTKITTLVLEKH >gi|316920349|gb|ADCU01000001.1| GENE 681 753078 - 753287 286 69 aa, chain + ## HITS:1 COG:YPO2595 KEGG:ns NR:ns ## COG: YPO2595 COG1278 # Protein_GI_number: 16122808 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Yersinia pestis # 1 69 1 69 69 96 72.0 9e-21 MTKKTGQVKWFNESKGFGFIEQHDGGKDVFVHFSAIASEGFKTLAEGQRVEYTIQDSPRG PAAANVVAL >gi|316920349|gb|ADCU01000001.1| GENE 682 753517 - 753726 257 69 aa, chain + ## HITS:1 COG:YPO1398 KEGG:ns NR:ns ## COG: YPO1398 COG1278 # Protein_GI_number: 16121678 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Yersinia pestis # 1 69 1 69 69 92 63.0 1e-19 MTLKMGLVKWYSQSEGFGIISPLDGGNDIYVNRSGIANSRKKLLTEGQRVEFSTYLGSRG LTAEDVIAY >gi|316920349|gb|ADCU01000001.1| GENE 683 753866 - 755113 745 415 aa, chain + ## HITS:1 COG:STM0986 KEGG:ns NR:ns ## COG: STM0986 COG3214 # Protein_GI_number: 16764346 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 408 1 407 410 429 54.0 1e-120 MSELSLSLNTLRNLHLYAQGLAEPYQRKATASDVVDCIRQMSLLQIDTINVVARSPYLVL FSRLGEYQNHWLDDALRNGEIFEYWAHEACFIPREDYSLVRPQMLAPDNMGWKYSKEWHD EHRQAIDALLVHIRQYGPVKAADFNVRNKKTSGWWEWKPEKRHLETLFSCGELMVKAREN FHRIYDLAERVIPDWNDEVHYISPELARQRMIINSARSLGVFKAQWLPDYYRLKKIDIKT MIAQMLDRQEITPVLLAGTQERYYVHHSLHSLLEKARAEALIATHTTLLSPFDPVVWDRR RALELFNFDYRLECYTPEAKRNFGYFSLPILQQGALVGRVDAKVHRKENVLELKSCYQET DVKFSDKKLNELKKSISRFAAWQQATQVVVRNQPESWRHYWGEGWRLDIVEGENG >gi|316920349|gb|ADCU01000001.1| GENE 684 755374 - 755832 410 152 aa, chain - ## HITS:1 COG:SSO2637 KEGG:ns NR:ns ## COG: SSO2637 COG2080 # Protein_GI_number: 15899363 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs # Organism: Sulfolobus solfataricus # 3 146 11 154 163 157 53.0 6e-39 MSKIKVKVNGKLIDAQVTGQMRLLDFVRDKLNLTATKEGCAVGECGACTVIMDGNAVCSC LVLAEQCDGAEITTLEGLSNDPMAKKLQNAFVEHGGVQCGFCTPGVLMSTSALLAKHPQP SDEQLLDALEGNICRCTGYQPIIQSIHAALKE >gi|316920349|gb|ADCU01000001.1| GENE 685 755842 - 759066 2380 1074 aa, chain - ## HITS:1 COG:SMb20132 KEGG:ns NR:ns ## COG: SMb20132 COG1529 # Protein_GI_number: 16263880 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Sinorhizobium meliloti # 9 758 22 760 772 357 32.0 5e-98 MSASCTTTTIRRVDGLAKVTGTAIYGNDMSLPGMLYGVCRYADIAAGKIEHIDLTEALNI DGVVKIATYQDIPGEPVVGVIVKDYLPIVKDEVVFHGDVIAVIAAETYEAACLAADKIQV SYTPYTPITDVEQALKDDARLIHPERGNNIAAHHHTIKGDIDAGFASSAHILEREYEVGF QEHAYIEPEVVLTWLDPTERHLIISGSIQNPHRVRSFVAKFMGCPQGHINIKRAVMGGSF GGKDDIIDHLACRSALLTTLTGRPVKFCYTREHSILESCKRHPYKMKYKVGVDNHGQIQA MKIDILADSGGYAASTPFVTWRSSVQAAGPYRIPNVRIDVTGVYTNNSYTSAMRGFGSPQ VVYANESLMDEIAEHLQISPVEIRQINALQQGDASVTGQIFDKHTVSAQEVLNRAVEAAD FNNKRQHYAELNRQGGVYRYGIGLALSYRGCSIGAEGVDTSTALVQVNEDGSINIATSVS ENGQGLQTTMSLIAAEAFGVPLAEIMFSEPPTSVIGDGGSTAATRGTLVGGGAILDAAMK IKQRILGVVGELIGTRELADTLWQDGLIINKHDPSQSIDFKTAVNKTKWASVSLTEYGWF VPPPIHWDEEKGTGSPYFTWVYGCQIAETRVNVSTGKTDLLHVTAAHDVGHVINPVGFNG QVSGGIAQGFGYALLEDFNIENGQVKSENFDTYLLPTIKDIPEITIIGVENPDQAGPLGA KGIGEPATELAAAAINNALSFALQTRFNKLPLTLEQVILGYNLKKPARQSELMVETSNKK QVLRLTDVSVTRPKTLSEALDLLAQDDVSVIAGGTDVIVQGRLQTKPMHLIDISRLSELT QIVENNGCLEIGAATTFNRIVEHEIVRTRYPLLAQACKTVGSNQIRNRATIGGNMVNAAP CGDSLPPAIIYDAEIELQSRDSTRRMPLCEFLQAGYKTQRRPDELMTKVILPAPPQPIPH AFYHQLGRRNALNITRQSLTCLIACDSTGVLNYCRLVDGALFSKPQRLLDIERCLLGHHL TLETINAASQQLEKLIYAAIGKRWSAAYKQPVFISMFRDMMMEAQTSLYQSEQA >gi|316920349|gb|ADCU01000001.1| GENE 686 759512 - 759688 211 58 aa, chain + ## HITS:1 COG:YPO1399 KEGG:ns NR:ns ## COG: YPO1399 COG2835 # Protein_GI_number: 16121679 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 58 1 58 60 97 84.0 6e-21 MDHRLLEIIACPVCNGKLYFNKENQELVCKADRLGYPLRDGIPVLLENEARLLPVDEK >gi|316920349|gb|ADCU01000001.1| GENE 687 759693 - 760448 777 251 aa, chain + ## HITS:1 COG:STM0988 KEGG:ns NR:ns ## COG: STM0988 COG1212 # Protein_GI_number: 16764348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Salmonella typhimurium LT2 # 1 244 1 244 248 389 77.0 1e-108 MSFIAIIPARYSSTRLPGKPLADIGGKPMVVHVMERALESGASRVIVATDHADVKQAVEA AGGEVCMTRADHHSGTERLAEVIEKCGFADDEIIVNIQGDEPLIPPSIIRQVAHNLAGSD AGMATLAVPITTSEEAFNPNAVKVVCDKNGYALYFSRATIPWDRDRFAVSRDEIGDTFLR HIGIYAYRAGFIRRYVTWTPSSLEQIEMLEQLRVLWYGEKIHVDVAATAPSPGVDTMEDL EQVRRIFAASK >gi|316920349|gb|ADCU01000001.1| GENE 688 760579 - 761496 556 305 aa, chain + ## HITS:1 COG:no KEGG:Spro_1720 NR:ns ## KEGG: Spro_1720 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 9 304 1 296 298 446 70.0 1e-124 MQQNVYHNMDHLKAELSVVLGESIGRLEQISEQPYASLFTLYNQQGTPLPLVAKTFLCQG IAQQEAYKLSMLARQGDIRLPTVYGVLTTHQSPYKEVLLIERLRGVSVEAPTRTPQRWQC LKEQIAEGILSWHRIDSHGCVGNVDSVQENTWPQWYQQRLEVIWSTLGNMQTTELGIETR RILFRSKEKLPELFAGFDDSCVLVHGNLTLRSMLKDQKSDQLLAMLNPGMMLWAPREYDL FRLSEDGMATELLHTYLQKAPVSDDFMMRRWLYVLWESIGRYLHTGVVERPVVDRAAQQL LPWLG >gi|316920349|gb|ADCU01000001.1| GENE 689 761945 - 763360 386 471 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 21 471 6 447 447 153 27 2e-35 MSVINPNLKIEHSKIEPVVDEVERRLPIAQLFTLGLQHVLVMYAGAVAVPLVIGGSLGLP KEQIAFLISSDLFCCGVVTLLQCLGIGRFAGIRLPVIMSVTFAAVTPMLAIGADPSIGLT GIFGATIASGIIATLLVPVIGRLMPLFPTVVTGVVITSIGISIMQVGIDWAAGGKGNPDY GSPIYIGTSLLVLVFILLVTRFAKGFLCNISVLLGILFGFAIAFMMGKVSFAGLGNAAWF APIKPFAFGWPTFEPVSIITLTVIMLITFIESMGMFLALGDIVGRPAKQQDIIRGLRVDG IGTVIGGLFNSFPHTSFSQNVGLVSVTGVSSRWVCVMSGGILIVFGLIPKMALIVASIPQ FVLGGAGIVMFGMVLATGIRILSRANYSTNRYNLYIVAISLGIGMIPTVSHDFFSQLPAA IQPLLHSGILLATVCAVSLNLYFNGYHPDNEIDDTEVKKITLAKAIKEKTV >gi|316920349|gb|ADCU01000001.1| GENE 690 763455 - 764951 378 498 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 27 451 7 423 447 150 27 2e-34 MKAIHNDAINIQERKNSPQIKVDVDPVDEILPIGQMLVYGLQHVLVMYAGAIAVPLIIGK AVGFTPEQIIFLISTDLFICGCATILQSIGLFNIIGSKLPIVQGCTFAALIPMALIGQQY GIGGISGAVIIAGGFTLLCAPFVCKLVRFFPKAVMGTIVTLIGLSILPVAGGWIGGGDLD AASFGSYGSLLMALFTLAIVMLIYTFGKGMLKNIAVLVGIIIGTVAYYFMGKLDLSQVAA TSWMTFPYPMRFAVPEFHLFPAVLMCMVMIVVMVETMSSMMAMGEIVGRPADQATLKRGL YACGSATLFGGFFNMFPYAAFAQNVGLVSMTGVRSRFIVGVAGCILITLGLFPKLAAFVV AVPKPVLGGAGIVMFGMVAVSGIRTLGQVDYRNNNNGMVVALTLGLGMLPVMVPQLFQQM PKAAEMFLHSGITIGTVVAIAANLILNGRDRQAKIPGCKECTLQDLDMNSTAAREAFTTT REYIAMRRRQNAQKNAAL >gi|316920349|gb|ADCU01000001.1| GENE 691 764926 - 766293 755 455 aa, chain + ## HITS:1 COG:RSc2119 KEGG:ns NR:ns ## COG: RSc2119 COG0402 # Protein_GI_number: 17546838 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Ralstonia solanacearum # 6 454 12 468 474 617 66.0 1e-176 MHKKTLLFKNAELLVTMDDERREIRGGCLLVEGNRIVAVGGKELCAAPADEEIDLHGHVV IPGLINTHHHMFQSLTRVIPEAQDGELFGWLNNLYPIWAGLTPEMIRVSTQTAMAELMLS GCTTSSDHLYVYPNGCRLDDSIEAAREIGMRFHACRGSMSVGRSKGGLPPDELVESEQSI LEDSRRLITSYHDAQRYSMLRIALAPCSPFSVSRELMVKTAQMAREYGVSLHTHLAENDN DVSYSQSHFGMTPAQYAEDLGWVGADVWHAHCVKLDQAGIGLFAKTGTGVAHCPCSNMRL ASGIAPIRTMLDEGVNVGLGVDGSASNDAGNMIAETRQAMLLQRVGFGPDAMTARQALEI ATRGGAKVLNRDDIGYLAPGMAADFVAFDLNTLNLAGAKHDPLAALVFCTPGNVAYNVIN GRVVIREGELQTIDLPSVVQHHNRLACLLVNRGRL >gi|316920349|gb|ADCU01000001.1| GENE 692 766308 - 766571 135 87 aa, chain - ## HITS:1 COG:no KEGG:ETAE_2163 NR:ns ## KEGG: ETAE_2163 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 7 82 15 90 94 70 46.0 1e-11 MKHRVISILIALIVFEAQVILLDVLSKAENMPVSLNPLNAISAVAFVLGWTTGLNSSMAL VTATVALLLIPIGVYCLCHTWLKQRHR >gi|316920349|gb|ADCU01000001.1| GENE 693 766568 - 767338 453 256 aa, chain - ## HITS:1 COG:STM0990 KEGG:ns NR:ns ## COG: STM0990 COG1434 # Protein_GI_number: 16764350 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 249 1 249 258 271 61.0 1e-72 MLFALKKFVGGLLLPLPLFLLIIAVGLIFMWWTRWQRLGKICISLAWLGILLLSLQPIAD RLLAPLENHYPTINTPSNADYIVVLGGGYTFNPDWAPSSNLINNSLPRVTEGVRQLELNP NAKIIFTGAAAISNPISSAQVAANVAKSLGVPAERIIILDKPRDTQQEAQEVAKIVQKQR LLLVTSANHLPRALRFFKAEALDPIPAPANQLAISSPLNPWERWLPSPLYLGHSERAWYE TLGSWWQALLKAKDEK >gi|316920349|gb|ADCU01000001.1| GENE 694 767502 - 768299 709 265 aa, chain + ## HITS:1 COG:YPO1402 KEGG:ns NR:ns ## COG: YPO1402 COG0500 # Protein_GI_number: 16121682 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Yersinia pestis # 5 265 1 261 261 383 67.0 1e-106 MSRGMQDRNFDNIAEKFARNIYGTTKGKIRQAVLWQDLEQLLTQLPNRPLHILDAGGGLG QVSCELAARGHHITLCDISGEMLKRAQDYADEKGVSQHMRFVQSPAQEMHQYLEQPVDLI LFHAVLEWVAEPQEALASLMKCLNPGGALSLMFYNYNGLLMRNVIIGNTAYVNQGMQKRK TRTLSPDHPLDPQKVYGWLEEIGLTISGKTGVRVFHDYLRDKTQQIEAFDDLLALEQRYC RQEPFVSLGRYIHVMAYKPDTKDQL >gi|316920349|gb|ADCU01000001.1| GENE 695 768296 - 769618 1318 440 aa, chain + ## HITS:1 COG:YPO1403 KEGG:ns NR:ns ## COG: YPO1403 COG3006 # Protein_GI_number: 16121683 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Yersinia pestis # 1 440 1 440 440 736 86.0 0 MSDFSQTVPELVAWARKNDFSISLPTERLAFILAIATLNSERLDGEMSEGELIDAFRHVS KAFEQTHETVAIRANNAINDLVKQRLLNRFTSELADGNAIYRLTPLGIGITDYYIRQREF STLRLSMQLSIVAQELRSAAEAAEEGGDEYHWHRNVFAPLKYSVAEIFDSIDLTQRIMDE QQQGVKADIAALLNQDWRAAISSCEVLLSETSGTLRELQDTLEAAGDKLQANLLRIQDAN MNNPDLAFVDKLVFDLQNKLDRIISWGQLTIDLWIGYDRHVHKFIRTAIDMDKNRVFAQR LRQSVQSYFDNPWALTIANADRLFDMRDEELALLNEEVTGELPPDMEYEEFSEIREQLAA MIEQELKIYQKEQRPLDLGAVLREYLAQYPRQRHFDLARILVDQAVRLGVAEADFTGLPA QWQAINDYGAKVQAHVIDKY >gi|316920349|gb|ADCU01000001.1| GENE 696 769599 - 770327 699 242 aa, chain + ## HITS:1 COG:YPO1404 KEGG:ns NR:ns ## COG: YPO1404 COG3095 # Protein_GI_number: 16121684 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Yersinia pestis # 10 242 1 233 233 379 86.0 1e-105 MSSTNTENMMPAKLAQAVFNPLFPALDSQLRSGRHIGIDELDNHAFLMDFQDELELFYSR YNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLAHEGIFSQQEL YDELLSLADESKLLKYVNQRSTGSDLDRQKLQEKVRTSLNRLRRLGMVYFMGNDSTKFRI TEAVFRFGADVRSGDDPRESQLRMIRDGEAMPLENTLSLNDENEENESSADGSADNAEDE QE >gi|316920349|gb|ADCU01000001.1| GENE 697 770324 - 774778 4750 1484 aa, chain + ## HITS:1 COG:YPO1405 KEGG:ns NR:ns ## COG: YPO1405 COG3096 # Protein_GI_number: 16121685 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Yersinia pestis # 1 1480 1 1480 1485 2102 85.0 0 MIERGKFRSLTLVNWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHF RNTTEAGATSGSRDKGLHGKLRAGVCYATLDVVNSRHQRVLVGVRLQQVAGRDRKVDIKP FTIQGLPTSFQPTQILTETVGERQARVLPLAELKERVEAIEGVQFKQFNSITDYHSLMFD LGVIPRRLRSASDRSKFYRLIEASLYGGISSAITRSLRDYLLPENSGVRKAFQDMEAALR ENRMTLEAIRVTQSDRDLFKHLITEATSYVSADYMRHSNERRIHLDQALLLRRELLGGRK QLLAEQYRHVEMSRELAEQSGSESDLETDYQAASDHLNLVQTAMRQQEKIERYQSDLEEL TYRLEEQNEVVAEASDLHADYEARSEAAEAEVDELKSQLADYQQALDVQQTRAIQYQQAL QALERARQVCQLPDLNADNSEEWLETFSAREQEATEILMQLEQKMNVASAAHSQFENAYQ LVVKLVGEVSRSEAWQAGRDLLRDWSSLQHQSERVQPLRMRLAELEQRLRSQQDAERLLQ EFCKRTGQQYQPEELDDAQREMEERIETLTLDVAEASERRMVLRQELEQITAKAKDLTAK APVWLAAQEALSQLSDQCGDELSDSRQVTEQMQQLLERERESTVERDEVAHQKREIENQI ERLSQPSGAEDGRLIALAERFGGVLLSEIYDDVTIDDAPYFSALYGPARHAIVVPDLSLV REQLAGLEDCPEDLYLIEGDPQSFDDSVFAADELERAVVVKASDRQWRYSRFPEVPLFGR AARESRLETLYAQRDELAERYATLSFDVQKTQRLHQAFSRFIGSHLAVAFEQDPEAELRQ INGRRTEIEREFNNQDNITQQQRQQLAQAKESVALLHKLTPHIGLLADETLQDRVEEIRE ELEEAQEAARYLQQHGANLAKLEPMLSVLQSDPEQHEQLRQDYQQAQQNQRSAKQQTFAL TEVVQRRAHFSYSDSAGMLTENSDLNDKLRQRLEHAEADRARTRDQLRQQQAQLAQYHQV LASLKSSFEAKRDMLKELSQELQDIGVQADPNAEERARIRRDELHTALSNNRARRNQLEK QIMFCESEMDNLQKRLRKVERDYHQIREQVTTAKAGWCAVMRLVKDNGVERRLHRRELAY MDADELRSMSDKALGALRLAVADNEHLRDVLRLSEDPKRPERKIQFYIAVYQHLRERIRQ DIIRSDDPVDAIEQMEIELARLTEELTSREQKLAISSKSVANIIRKTIQREQNRIRMLNQ GLQTVAFGQVNSVRLNVNVREAHSTLLTVLSEQQEQHQDLFNSNRLTFSEALAKLYQRLN PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVM VVQSWEEESRRLRGKDISPCRLLFLDEAARLDAKSIATLFELCERLEMQLIIAAPENISP EKGTTYKLMRKVFNNTEHVHVVGLRGFAPEKNIMESVTQEESES >gi|316920349|gb|ADCU01000001.1| GENE 698 775009 - 776835 1194 608 aa, chain + ## HITS:1 COG:YPO1407 KEGG:ns NR:ns ## COG: YPO1407 COG2989 # Protein_GI_number: 16121687 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 25 607 23 618 618 747 65.0 0 MVLNNRFRLGHMVVGGSMAMSALAMSLMPAHAEVVTQPVTQPAVSVATMSVPQSRSTLIS QLPQGVSLRYLNQLSSLYAANHMQPMWQDRAAVQQFQQQLAEVALSGVQPQFTQWVQALV NPDVKDMARDAVLSDAMLGYLQFVSGVSATKGSWLYSSVPYAIAEPPATLVNNWQLSVRD GRLATFVQSLAPSHPQYAAMHKALKDLLADTRPWPTVNDGPSLKPGDLSPDMPALREVLQ RTGMLTEKGNVKSPTPVPEAQPLQSPASQEPNAVISPSTTAVSELTQQPTPEATPAKTMP VSATDNRYTPELVEAVKRFQQWQGLASDGVIGKRTREWLNVSPQTRATLLALNIQRLRIL PGEVDTGIMVNIPNYSLIYYQNGTEVLTSRVIVGRPTRKTPLMNSELNNVVVNPPWNVPT TLIREDIVPKAMRDPGYFERHGYRLFSGWSNDAEVVDPYMIDWASVSPRNFPYRIQQAPG VNNSLGRYKFNMPSQDAIYLHDTPNHGLFEKDIRALSSGCVRVNKASTLANMLLQDAGWN DARVSSALKEGNTKYVPIRHRIPVRLYYLTAWVSEDGKPQFRTDIYNYDDTVRSGAKVAA QAERLFQL >gi|316920349|gb|ADCU01000001.1| GENE 699 777013 - 777561 515 182 aa, chain + ## HITS:1 COG:YPO1408 KEGG:ns NR:ns ## COG: YPO1408 COG3108 # Protein_GI_number: 16121688 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 182 1 182 182 293 76.0 1e-79 MDPINIHRRKWLALGGVAMGMAMLPGQALATLSTPRPRILVLNNLNTGEQLKAEFFDGKN YIQEELARLNHLFRDYRANKVKRIDPRLFDQIFRLQAMIGTRKPIQLISGYRSPRTNSEL RERGSGVAKHSYHTLGQAMDFHIEGVQLANIRKAALKMRAGGVGYYPRSNFVHIDTGPVR NW >gi|316920349|gb|ADCU01000001.1| GENE 700 777677 - 778324 421 215 aa, chain + ## HITS:1 COG:YPO1409 KEGG:ns NR:ns ## COG: YPO1409 COG0491 # Protein_GI_number: 16121689 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Yersinia pestis # 1 215 1 215 215 335 69.0 3e-92 MKYKIIPVTAFQQNCTLLWCEDTHQAAIVDPGGEPAKILREVEALGLTVTQILLTHGHLD HVGAAGQLAKSLNVPIYGPQEDDLFWLEGLPAQSKMFGFTNCDPLTPTRWLNDGDTLQVG NQTLQVFHCPGHTPGHVIFFNEESRLAQVGDVLFSGGVGRSDFPRGDHQALINSIKTKLW PLGNDVAFIPGHGPMSTFGQERQTNPFVCDEPAVW >gi|316920349|gb|ADCU01000001.1| GENE 701 778391 - 779584 1304 397 aa, chain - ## HITS:1 COG:aspC KEGG:ns NR:ns ## COG: aspC COG1448 # Protein_GI_number: 16128895 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 396 1 396 396 707 86.0 0 MFENIPAAPADPILGLADLFRADARTNKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE TTKNYLSIDGIPAFATCTLELLFGKESPIIQDKRAHAAQTPGGTGALRVAADFIANKTSA KRVWVSNPSWPNHKSVFNAAGLEVREYDYYDADNHQLDFSGLQKSLEQAEAGDVVLFHGC CHNPTGIDPTPEQWEALAEMSVSKGWLPLFDFAYQGFANGLEEDAQGLRIFAAKHDELLV ASSYSKNFGLYNERVGACTLVAADSETADKAFSQIKATIRANYSNPPAHGGSVVATILGN EALRTIWEQELTDMRQRIQRMRQLFVNTLQEKGAEQDFSFIIKQNGMFSFSGLTKEQVIR LRDEFGVYAVNSGRVNVAGMTPDNMAPLCEAIVAVLK >gi|316920349|gb|ADCU01000001.1| GENE 702 779885 - 780997 1303 370 aa, chain - ## HITS:1 COG:ompN KEGG:ns NR:ns ## COG: ompN COG3203 # Protein_GI_number: 16129338 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 23 370 23 377 377 443 73.0 1e-124 MKRNILAVVIPALLAAGAANAAEIYNKDGNKLDLYGKVDGLHYFSDDKGSDGDQSYARFG FKGETQISDQLAGYGQWEYNIKVNNTEGNGSSKNATRLGFAGLKFGDYGSFDYGRNYGVI YDVEAWTDMLPEFGGDTYTNSDNFMTGRTNGVATYRNNNFFGLVDGWNFAVQYQGKNGSA TESNNGRDYQQQNGDGYGLSTTYDFGMGISAGAAYSSSDRTNQQTTLGRQVNSNVAGGDK ADAWTAGLKYDANNVYLAAMYAETRNMTPYGKTGIADKTQNYEIVAQYQFDFGLRPSVAY LQSKGKDLNTNLSGDKDLVKYVDVGATYYFNKNMSTYVDYKINLLDDNDFTKANGIATDD IVALGLVYQF >gi|316920349|gb|ADCU01000001.1| GENE 703 781327 - 782727 1525 466 aa, chain - ## HITS:1 COG:YPO1412 KEGG:ns NR:ns ## COG: YPO1412 COG0017 # Protein_GI_number: 16121692 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Yersinia pestis # 1 466 1 466 466 876 89.0 0 MSVVPVVDVLQGRAAVDTEVTVRGWVRTRRDSKAGISFLAVYDGSCFNPLQAVVNNSLPN YESDVLRLTTGCSLEVTGKVVPSPGEGQSFELQATEVKVVGWVEDPDTYPMAAKRHSIEY LREVAHLRPRTNLIGAVARVRHTLAQAIHRYFHENGYFWVSTPLITASDTEGAGEMFRVS TLDMENLPRTDEGKVDFGEDFFGREAFLTVSGQLNGETYACALSKVYTFGPTFRAENSNT SRHLAEFWMVEPEVAFADLNDIAGVAEGMLKYVFQAVLDERADDMEFFAQRVDKDAIDRL KRFVTSDFAQVDYTEAVEILLNCGKTFENPVYWGVDLSSEHERYLAEQHFKAPVVVKNYP KDIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQREERLDMLDARLEEMGLNKEDYWWY RDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNATF >gi|316920349|gb|ADCU01000001.1| GENE 704 783002 - 784207 951 401 aa, chain - ## HITS:1 COG:YPO1413 KEGG:ns NR:ns ## COG: YPO1413 COG1488 # Protein_GI_number: 16121693 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Yersinia pestis # 1 401 1 401 401 634 76.0 0 MTQHASPILTSLLDTDAYKLHMQQAVYHRYRNLTVAAEFRCRGDELLGSYADDIIQQIAF MSDLALSDEEYAYLSSLPFFKKDYLDWLREFRFNPQQVDIRNEDGHLSIRITGPWREVIM WEVPLLAVISEVVHRDRSPLATPEMAVAQLRKKLTAFKALSADIDLAGFKLMDFGTRRRF SHNVQRAIIETLKTDFPPLVGTSNYKFAQELNLAPMGTQAHEWFQAHQQICPVLANSQRA ALQAWLDEYPDQLGIALTDCITMDAFLRDFGPQFANRYQGLRHDSGEPTEWGEKAIAHYR KLGIDPMTKTLVFSDNLDLEKALELYRHFHDRINLGFGIGTRLTCDIPDVKPLNIVIKLV ECNGKPVAKLSDSPGKTICHDKAFVKALRKAFDLPLVKKAS >gi|316920349|gb|ADCU01000001.1| GENE 705 784424 - 786157 898 577 aa, chain - ## HITS:1 COG:aq_035_2 KEGG:ns NR:ns ## COG: aq_035_2 COG2199 # Protein_GI_number: 15605636 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Aquifex aeolicus # 384 564 66 248 251 117 35.0 6e-26 MKLKNLIYIFTTALVFFFGIFIYSSLHKAHIDYAENQQNLYKVKRLRELTEVFQSALLAH RLKRISFISNAITEDEILNAEKQVRRHAAALVLSPTDTPSTVLEKKTHEMFDKAEALVYS LSANDNQELSAVGPLIQAQLDLKSAYYITELNKLYFLYIYNTTLSDSHSYKFIESIRLNN RLTLTATELIDQLVDIKTDDVKRNRSYLRSIELIGVLDSLRSRVDFIIATAPDAAQSEAA IADLSEKLSKSSMQKLTADLTSVMQSRSSQAFDGFYRYIIGMDKASAVFVNSSYDLELHE LQTKIDLSRVQLYGMISLCWLLALFIVMPILVFSSKITSWLTLTNKNIMKLSKGDLNIQP DNSVVSGELSAISNAINQLRQNQIEKHQLELEKQQLINELLEASSTDPLTNIYNRRKFFN QCSQIKSAEYPLAFCLIDIDNFKNLNDRYGHDVGDLALIAFSQLLTQSLPKDTVYCRYGG EEFAILLKYTDVPQAMQIIDSVRLDTELLHITIPNKPGVGFTISCGLARLDDYKNINHSI KQADEALYFSKKRGKNQVSFYSQSGFISFDAKHKDPS >gi|316920349|gb|ADCU01000001.1| GENE 706 786600 - 789218 2303 872 aa, chain + ## HITS:1 COG:YPO1414 KEGG:ns NR:ns ## COG: YPO1414 COG0308 # Protein_GI_number: 16121694 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Yersinia pestis # 1 872 1 871 871 1430 80.0 0 MTQQPQAKYRHDYKAPDFTITDLALDFDLDADTTTVTAVSQVKRQGSEQAPLILNGEDLT LKSVSVNDVPWEHYSESENQLVLENLPDEFTLTIVNEIHPAKNSALEGLYLSGEALCTQC EAEGFRHITYYLDRPDVLARFRTRIVADKARYPFLLSNGNRIAQGELQDGRHWVQWEDPF PKPCYLFALVAGDFDVLRDSFTTQSGRDVALELYVDRGNLDRAGWAMTSLKNAMKWDETR FGLEYDLDIYMVVAVDFFNMGAMENKGLNIFNSKYVLAKAETATDKDYLGIEAVIGHEYF HNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRIDNVRVMRGAQFAEDASPM AHPIRPDKVIEMNNFYTLTVYEKGSEVIRMMHTLLGEENFQKGMKLYFERHDGSAATCDD FVQAMEDASGVDLTLFRRWYSQAGTPELSVRDEYDAEHQQYRLYVTQQTPPTSEQQEKLP LHIPLDIELYDPQGNVIPLMIDGEAVSNVLNVTESEQSFAFDNVPHKPIPSLLREFSAPV KLEYPYSDQQLSFLMQHARNDFARWDAAQMLLAKYVRLNVAKFQQNQPLSLPMHVVDAFR AVLLDESLDPALAAQILTLPSENEMAELFSIIDPEAIGAVHSAITRLLAKEMADEWLAVY NNNRTPEYRIDHADIAKRSLRNVCLRYLAFGEDVVMADELVVRQYENANNMTDSLAALSA AVGAELPCRDRLMAEFDERWHQDGLVMDKWFMLQATSPSALVLDNVKALLKHRSFTLSNP NRIRSLVGAFAQANPSAFHAADGSGYAFLTEILKDLNTRNPQVAARMIEPLIRLKRYDES RQALMRKSLEELKGLDNLSGDLFEKITKALNA >gi|316920349|gb|ADCU01000001.1| GENE 707 789527 - 790537 697 336 aa, chain + ## HITS:1 COG:YPO1415 KEGG:ns NR:ns ## COG: YPO1415 COG0167 # Protein_GI_number: 16121695 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Yersinia pestis # 1 336 1 336 336 611 86.0 1e-175 MLYPFVRKALFQLDPERAHEFTFKQLRRITGTPLEFLVRQSVASKPVTCMGLSFKNPLGL AAGLDKDGECIDALGAMGFGFIEVGTVTPRPQAGNDKPRLFRIVEAEGLINRMGFNNRGV DNLVENVKKSHFGGVLGINIGKNKDTPVEQGKDDYLICMEKVYSYAGYIAVNISSPNTPG LRTLQYGEALDDLLTAIKTKQIELQQKHHKYVPVAVKIAPDLSHEELIQVADSLVRHNID GVIATNTTLDRKLVNGFNYCEQAGGLSGRPLQLHSTEIIRQLSQELQGRLPIIGVGGIDS VIAAREKIDAGASLVQIYSGFIFKGPGLIKDIVNYI >gi|316920349|gb|ADCU01000001.1| GENE 708 790725 - 791273 487 182 aa, chain + ## HITS:1 COG:no KEGG:Spro_1741 NR:ns ## KEGG: Spro_1741 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 165 1 165 182 249 73.0 2e-65 MNIKPGDNWRWYFDEEHDRLMLDLANGMIFRSRFAGKMLTPDAFDECSFCVDDAALYYQF EERSRQTGLKKEQRAELILNALVAQRFLKPLMPKSWHFAPQSCAVMPALGELVAVQISNT AEQAKLLVVEAGDSASLCLLAQPYLQLAGKSMQLGDAIKVMHDRLIAVQPSVDSEDVLAY AV >gi|316920349|gb|ADCU01000001.1| GENE 709 791374 - 792498 527 374 aa, chain - ## HITS:1 COG:YPO1417_1 KEGG:ns NR:ns ## COG: YPO1417_1 COG3217 # Protein_GI_number: 16121697 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein # Organism: Yersinia pestis # 8 278 2 272 273 408 69.0 1e-114 MERGSAEMITLSKLYVHPIKSMRGLQLSQAQVLPSGLAFDRALMVTETDGTFITARQNPQ MVTFTPALLPNGIALTGPDGESILVLWQDFLHLQQPTEVWGNHFSALVAPPQINDWLSRY FKRAVQLRWLGNELSRRVKHHPDIPLTFADGYPFLLINEASFQNLQRRAPNSIRIEQFRP NIVVSGAKAFDEDSWLVIRIGEVIFDLVKPCSRCILTTVSTDRGRKHPAGEPLKTLQSFR TADNGDVDFGMNMIARGGGIIRQGDSVEILSLRPPRLYSAGEVNATLATPPANEKSVNIE YQGQTFVGNNQQVLLEQLEAQGIRIPYSCRAGLCGACKITLVEGEVTPLKQSAIGSNGVI LSCSCIPKSSIKLS >gi|316920349|gb|ADCU01000001.1| GENE 710 792647 - 792865 303 72 aa, chain - ## HITS:1 COG:no KEGG:ROD_14861 NR:ns ## KEGG: ROD_14861 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 4 72 9 77 77 84 60.0 1e-15 MNPESVMTYDRNRNAIKVGSRVMVSGTGEIGVITAIHADNLPSAQVRRAKCVDITDLNGR YVPTELIRLGMN >gi|316920349|gb|ADCU01000001.1| GENE 711 793320 - 795446 2234 708 aa, chain + ## HITS:1 COG:YPO1418_1 KEGG:ns NR:ns ## COG: YPO1418_1 COG0116 # Protein_GI_number: 16121698 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Yersinia pestis # 1 386 1 384 384 663 86.0 0 MKSLFASTARGLEELLKNELEALGAHSCQIVQGGVHFQGDDRLLYQSLLWSRLASRILMP LNEFKVYSDLDLYLGVQAIDWTSIFGVDKTFAVHFTGTNEEIRNSQYGALKVKDAIVDSF TRKIDARPTVAKQTPDIRINVFLQRETASVALDLSGEGLHQRGYRDLTGAAPLKETLASA IILRSGWKVGTPMVDPMCGSGTLLIEAAMMASDHAPGLTRQHWGFSAWNGHNPELWRELL AEAQVRARRGLQAQEGQSRFFGSDNDRRVIEMARANARRAGVSELITFNVADVSNLKNPL PEGPVGTVLSNPPYGERLESEPALIALHNALGRIMKGAFGGWQLSLFSASPELLSCLQLR AERQFKAKNGPLDCVQKNYQLAENPLGTVSGQIAEDYANRLRKNLKKLDKWAKQEGIECY RVYDADLPEYNVAVDRYADKVVIQEYAPPKTVDAQKARQRLFDVINATQSVMNLPSNSLI LKTRERQKGKSQYEKLAQKEEFMLVKEYNAELWVNLTDYLDTGLFLDHRIARRMLGEMCE GKDFLNLFAYTGTASVHAGLGGARSTTTVDMSRTYLEWAEKNLRANGLTGRQHRLVQADC LSYLHNSDEQYDVIFIDPPTFSNSKRMEATFDVQRDHIDIMRDLKRMLRRRGTIMFSNNK RGFKMDLEALGALGLEAKEITAQTLSQDFARNRQIHNCWLIRHAGEEK >gi|316920349|gb|ADCU01000001.1| GENE 712 795450 - 797357 1679 635 aa, chain + ## HITS:1 COG:YPO1419 KEGG:ns NR:ns ## COG: YPO1419 COG0488 # Protein_GI_number: 16121699 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Yersinia pestis # 1 635 1 637 637 993 77.0 0 MSLISLSGAWISFSDAPLLDNTELHIEPNERVCLVGRNGAGKSTLLKVLGKELPLDDGRI IYEQDLVVSRLQQDPPRNIGGTVFDFVSEGVAEQAQHLKAYHDLLKKVEADPSEQNLNRL SALQEILDHQGLWRIDSRISDVLTKLGLNADTDLSALSGGWLRKAALARALVCEPDVLLL DEPTNHLDIETITWLEEFLKEFTGSIVFISHDRSFIRSMATRIVDLDRGKLVSWPGNYDA YLLAKEEALRVEEMQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKAMRNEHAERRS VQGNAKMQVEEALRSGKIVFEMENVSYSVAGKTLVRDFSVQVNRGDKIALVGPNGCGKTT LLKLMLGQLQPDSGKVRCGTKLEIAYFDQHRAELDPDKTVMDNLAEGKQEVMVNGRPRHV LGYLQDFLFHPKRALTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDIETLELLE ELIDGYQGTVMLVSHDRQFVDNSVTDCWIFEGNGVINSYVGGYYDAHKQKADMRSFSQQA AAPKPQGTTSAPKAEVKKRSNKMSYNLLRELEQLPARLEALETELTALQAEVAKPEFFNQ SHAETQSVLQKMAETEQQLESAFERWEELEAMKNA >gi|316920349|gb|ADCU01000001.1| GENE 713 797461 - 798729 639 422 aa, chain + ## HITS:1 COG:YPO1420 KEGG:ns NR:ns ## COG: YPO1420 COG2995 # Protein_GI_number: 16121700 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Yersinia pestis # 13 422 17 426 428 585 70.0 1e-167 MCSGHHLDSENKILCPQCDMLVELPPLPEGTKGSCPRCHTTLVVKWREPRRQPVLYAFCA LFMLILSNLFPFVNMTVAGIKNAITLIEIPRVLVSEDYASMASLFMIFVQLVPAFCMVAV ILLNMRVPMPTQLKVMMAKVLFKCRSWCMVEIFLAGVLVSFVKLMAYGDVGVGSSFLPYC LFCVLQVRVFQVIDKRILWSDILPAPKHPENLRVGVTGIQQGLRACTCCSAILPADQLSC PRCHTKGYVRRRNSLQWTMSLLITAIMLYIPANVLPIMVTQALGTKLTSTIMAGVILLWG EGSYPVAMVIFIASIMVPTLKILAIAWLCWDAKYATRGDSERMHFVYEIVEFVGRWSMID VFVIAVLSALVNMGQLMSIYPDIGALLFAMVVIITMISAMTFDPRLIWDRERGLTYKEPQ SE >gi|316920349|gb|ADCU01000001.1| GENE 714 798722 - 800362 1374 546 aa, chain + ## HITS:1 COG:YPO1421 KEGG:ns NR:ns ## COG: YPO1421 COG3008 # Protein_GI_number: 16121701 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Yersinia pestis # 8 546 1 540 541 757 69.0 0 MNEQETGVAKVEKIKRWSPVWIVPIVTALIGAWVIFYHFSHQGPEVTLITSSAEGLEGGK TAIKSRSVDVGVVETVTLNNDLTKVIVKARLNSGMEKLLRKDSVFWVVKPQIGREGVSGL GTLLSGAYIELQPGSSKDEREEFNLLDQPPLAPPDAKGIRVTLNSEQAGQLSPGDPVLFR GLRVGSVETSQFDTKNRQIHYQVFVSAPYDTLVTDNVRFWIDSGVSFDMSAQGMRLEMGS LTTLFSGGVSFDVPQGWAVGKPAANQSQFDLFDNQRSIQESLYTEHKSVLMFFSDSIRGL QVGAPVEFRGIRLGTVAQAPYFVSGLSQKLDSDYQIPVLVNIEPGRIQQKLGDNFNVEQH LFSGVGEGLRASLKSANLLTGSLYIDLDFYPQAKPWKGPRKIDGLPVVPTVSGGLAQLQQ KLTATLDKINALPLEPMINEATNTLKASQKTMAETQKTLDTLNKLVSSKEAQALPADMQK TLIELNRSVKGFQPGSPAYNNMVGDMQRLDQVLRELQPVLRTLNEKSNSLVFEAPAGKDP QPKRTK >gi|316920349|gb|ADCU01000001.1| GENE 715 800362 - 800922 569 186 aa, chain + ## HITS:1 COG:YPO1422 KEGG:ns NR:ns ## COG: YPO1422 COG3009 # Protein_GI_number: 16121702 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 186 1 189 192 213 62.0 2e-55 MKVWMIGAAALLLSACSSQPQKNYYQLPVPTATTSVVHAPVESGAHQLWLERVNVADFLS ALGVVYQTNDVQFVTAGNNLWASPLEQQLQQTMVANLSAAMPGWIVSAQPLGNVQDTLNI NVTGFHGRYDGKAVISGEWILMRSGQLTKRAFNLVLPVQQDGYDALVKTLAQGWQQEAQQ IARQVQ >gi|316920349|gb|ADCU01000001.1| GENE 716 801180 - 801347 82 55 aa, chain + ## HITS:1 COG:YPO1423a KEGG:ns NR:ns ## COG: YPO1423a COG3130 # Protein_GI_number: 16121704 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome modulation factor # Organism: Yersinia pestis # 1 55 1 55 55 77 87.0 9e-15 MKRQKRDRLERAQSRGYQAGIIGRSKEFCPYQSVDARSHWLGGWRQAMEDRSVMA >gi|316920349|gb|ADCU01000001.1| GENE 717 801666 - 802607 459 313 aa, chain + ## HITS:1 COG:STM0606 KEGG:ns NR:ns ## COG: STM0606 COG0583 # Protein_GI_number: 16763983 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 7 300 3 296 300 162 32.0 7e-40 MFEHQDSLKSLRKFDLNLLTVFEAVYYYKSVSKAADILGMTSPAVSQSIQRLRQYFPDPL FIRYGKGISATVFADSMHENIKGSLSGIIDIFADKGDSIRNLVIWSDPHLAQVLIPDICS HLMSLPKLKCRIVHNLLPEDAVGVEHALLYHKTDIIFDIAPIFNSAIESELIFREKIVAV CGKDHPRLKDSLSANSLKDERCITIIKDRKKINEFKSKIDVLLGKRVISFASPSSLIALS VIEKTNDIGFFPESMYEKFKDIYNLKRLECDVDLGSYEVYMSYSKKALQDKALLELVERV RETFVMNNKSVHP >gi|316920349|gb|ADCU01000001.1| GENE 718 802682 - 803200 567 172 aa, chain - ## HITS:1 COG:ECs1038 KEGG:ns NR:ns ## COG: ECs1038 COG0764 # Protein_GI_number: 15830292 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Escherichia coli O157:H7 # 1 172 1 172 172 316 90.0 1e-86 MVDKRDSYTKEDLEASGRGELFGAGGPPLPSGNMLMMDRVVKMTEDGGNYNKGYVEAELD INPDLWFFGCHFVGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLP TAKKVTYRIHFKRVINRRLIMGMADGEVLVDGQVIYNASDLKVGLFKDTSAF >gi|316920349|gb|ADCU01000001.1| GENE 719 803269 - 805014 1257 581 aa, chain - ## HITS:1 COG:YPO1431 KEGG:ns NR:ns ## COG: YPO1431 COG1067 # Protein_GI_number: 16121710 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent protease # Organism: Yersinia pestis # 1 581 8 590 590 786 65.0 0 MSNYRLDWQSLLPDTTPYQSVFAAAAQQPALTFSEYQPRLENSLAHFCHPQSPSPFMILK AEETYEYLALIHRATGELLPELTLRGSQYHIDGMHVSIMPADKHQSNFAATATSLFADWY EGEQLFGTVRQSNGKITLEPGMVHHANGGVLILSLRTMLAQPLLWLRLKQIVLGRKFKWF SPDENKPLPVHIPDMPIDLKVILVSDREGLADFQDMEPDLCFNSLYGEFEADMSLVDTDD MRRWCSLVTTIANEYQLPAIAEDAWPVLVNTAIRAIGDQGNLPLSPTLIARTLREAALHS NDVIDAQALNETLAVRRWREGYLAERMHDEIELGQILIETEGEVIGQINGLSVLEYPGHP LMFGEPSRITCAVHLGDGEFTDVERKAELGGNLHAKGMMIMQAFLISELDLEQQLPFSAS IVFEQSYGEVDGDSASLAELCALISALSLAPINQQIAVTGSVDQFGHVQPIGGVNEKIEG FFEACQRRGLTGTQGVIIPATNVRHLCLNAEVIEAVKAGTFHLWAVENAEDALPILTGIA YRSESGPSLIGAIQERIAAISPLDKRQLPWPLRWLNWFNHG >gi|316920349|gb|ADCU01000001.1| GENE 720 805223 - 805681 423 152 aa, chain + ## HITS:1 COG:ECs1040 KEGG:ns NR:ns ## COG: ECs1040 COG3120 # Protein_GI_number: 15830294 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 149 1 149 150 208 81.0 3e-54 MKYQQLENLESGWKWKYLVKKHREGESVTRYLESSMAQQAVELLLKLENDPVHVQEWIRE HMNPDLQNKMKQTIRARRKRHFNAEHMHTRKKSIDLEYLVWQRLAGLAQRRGSTLSETIV QLIEDAERKEQYANKMSSLKKDLQSFLGKTTE >gi|316920349|gb|ADCU01000001.1| GENE 721 805800 - 806855 974 351 aa, chain - ## HITS:1 COG:YPO1435 KEGG:ns NR:ns ## COG: YPO1435 COG2885 # Protein_GI_number: 16121713 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Yersinia pestis # 1 351 1 353 353 496 74.0 1e-140 MKKTAIALAVALAGFATVAQAAPKDDTWYVGGKLGWSHYYDNSINHFGSTNVRPDQFGGG AFFGYQANPYLGFEMGYDWLGRMEYRGDNNGAFKSQGVQLAAKLSYPIADDLDIYTRLGG MVWRADGSANSATKGRYIDSNDTGVSPLAAIGVEYALNKDWATRLDYQFVSNIGDANETA ARPDNTLLSVGVTYRFGQDEAAPAPAPAPAPAPVVETKRFTLKSDVLFNFNKATLKPQGQ QALDQMYAQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSEQRAQSVVDYLVSKGIPADKI SARGMGKADPVTGSTCDNVKARAALIECLAPDRRVEIEVKGIKDVVTQPQA >gi|316920349|gb|ADCU01000001.1| GENE 722 807213 - 807719 425 168 aa, chain - ## HITS:1 COG:YPO1436 KEGG:ns NR:ns ## COG: YPO1436 COG5404 # Protein_GI_number: 16121714 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: SOS-response cell division inhibitor, blocks FtsZ ring formation # Organism: Yersinia pestis # 1 168 1 168 168 151 52.0 5e-37 MRTHSLQHYTDRPSFLNTSAHQPEGQENAYAGVISELVYSEHQPMLSLLLLPLLRQLGKQ SRWLLWLNPQHKLSKQWLADSGLPASKVMQLNQIEPVDSIYAMECALRSGNYSVVLGWLP PLTQNERARLRKAAQDGECFGLIMQPDHNVESDKGQLNLLKIQSKLFH >gi|316920349|gb|ADCU01000001.1| GENE 723 807942 - 808562 293 206 aa, chain + ## HITS:1 COG:YPO1437 KEGG:ns NR:ns ## COG: YPO1437 COG3070 # Protein_GI_number: 16121715 # Func_class: K Transcription # Function: Regulator of competence-specific genes # Organism: Yersinia pestis # 1 201 1 201 211 135 37.0 7e-32 MKGLFSNKADIAHEVFSSLGAVKLRSQFGGFGVWLDKTMFGVVSDGELYLRAHDELKSRF VTYGMKAFIYTKRGIPVRLSYYRVECNMWDDPSLLRHLAYASLQQSIELKSLKAAESDGL RTLPNINNMMERLLGKIGITSADQLISMGETEAFIRLKKLNANLHNRLLFDLAGAVRKCH EAALSYQVRMTLDEWLKNNTYRWQKK >gi|316920349|gb|ADCU01000001.1| GENE 724 808625 - 810760 1352 711 aa, chain - ## HITS:1 COG:YPO1438 KEGG:ns NR:ns ## COG: YPO1438 COG1289 # Protein_GI_number: 16121716 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 691 1 691 712 1033 75.0 0 MLSFAPGLKRYAYSSALLYNFRIFIALTGAAGVPWFIGEPRLTIPLTLGVVAAALTDLDD RLVGRLRNLAITLTCFFIASASIELLFPYPWLFAIGLMVSTVGFILLGALGQRYATIAFG ALLIAIYTMLGTSMYHIWYQQPLLLIIGAVWYNVLTLMGHLIFPIRPLQESLARSYSQLA VYLDAKSNLFDPDQEGNFNQPLIDVAMANSNLVTTLNQTKASLLTRLKGDRGQRGTRRTL HYYFVAQDIHERASSSHFQYQQLSEMFRYSDVLFRFQRLLMLQARACAQLSQSILLQQKY QHDLRFERVFTHLEATLQRIAAQHGHQHILVKSLFNLLLNLKAIDAQLANIESEQSLATE REEENTLSDDRISGWNDMKLRISRHLTPQSALFRHAIRMSIVLGVGYGFIQFTGLNHGYW ILLTSLFVCQPNYNATKRRLALRVVGTLAGVLLGLPILYFVPSLEGQMVLIVISGVLFFA FRNVQYAHATMFITLLVLLCFNLLGEGFEVAGPRVFDTLVGCAIAWAAVTFIWPDWKFRA LPAVVQKTLNADCRYLDAILVQYHQGKSNALDYRVARRDAHNCDAELASVISNMSAEPKN NAQTQESAFRLLCLNHTLLSYISALGAHRDRLDNAEVLSMLDDAACYMDDALNYDSSIAE RTEEAIQKLKHRLTEYSSPSDNTEQLVVQQISLMMGVLPELMQLKQGLMTS >gi|316920349|gb|ADCU01000001.1| GENE 725 810772 - 811218 292 148 aa, chain - ## HITS:1 COG:YPO1439 KEGG:ns NR:ns ## COG: YPO1439 COG3304 # Protein_GI_number: 16121717 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 148 1 148 148 234 83.0 3e-62 MRTVLNILNFVLGGFFTTLGWLLATLVSIILIFTLPLTRSCWEITKLSLVPFGNEAVHVD DLYPDRKNTLLTTGGTLLNIVWFILFGWWLCLSHIAAGIVQCVTIIGIPVGIANFKIAAI ALWPVGRRVVPVEVAQQMRVTNASRRFK >gi|316920349|gb|ADCU01000001.1| GENE 726 811547 - 813580 1972 677 aa, chain + ## HITS:1 COG:YPO1440 KEGG:ns NR:ns ## COG: YPO1440 COG0210 # Protein_GI_number: 16121718 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Yersinia pestis # 2 677 9 661 661 923 69.0 0 MGQHLAQHPYNRVRLLNAGVEVSGDRHEYLIPFNQLVAIHCKRGIVWGELEFELPEEKVV RLHGTDWQETQRFYQYLQQSWQAWSEEMAQISADVLAAQVEELESLNAQDRWLKRSELKE IRTMIESCFEAIPLPQQRLEEFDSCRDRYRYCLKWLNYGLRMVDERNQQWTKRMLEEHAA FFEQVESQPLNASQAQAVVNGENGVLVLAGAGSGKTSVLVARAGWLLLRKEATPEQILLL AFGRKAAEEMNDRIQERLHTEDIQAKTFHALALQIINHSGKKTTHISKLEGDAQARQKLL VKAWQQECSAKKAQAKGWRQWLTEDLEWQVEEENYWQDKKLAMRLAPKLERWVGLMREHG GSQSQMIEDAPEEIRDLFQKRIRLMSPLLKAWKSALKDEGAVDFPGLIQQAIAVLDKGRF ISPWKHILVDEFQDISPQRARLLESLRKQNSRTNLFAVGDDWQAIYRFSGAELSLTTAFT QHFGDSDRRELDTTYRFNRRIGEIANGFIQQNPHQLRKSLNSLSEGPKKAVTILPQERLE DLLNKLSGYVKPEERILILARYRYLKPEILDKAATRWPKLTIDFMTIHGSKGQQADYVII LGLQDGKDGFPATTGESVIEQVLLPQSEDFPDAEERRLLYVALTRARHQVWLLQDTDNPS VFVDQLKRLGVAVQRKP >gi|316920349|gb|ADCU01000001.1| GENE 727 813674 - 814132 380 152 aa, chain - ## HITS:1 COG:ECs1047 KEGG:ns NR:ns ## COG: ECs1047 COG1803 # Protein_GI_number: 15830301 # Func_class: G Carbohydrate transport and metabolism # Function: Methylglyoxal synthase # Organism: Escherichia coli O157:H7 # 1 152 4 155 155 253 80.0 8e-68 MELTTRTIAKKKHIALVAHDHCKQALLSWVQANRELLAQHQLSATGTTGNLIQRATGIPV NSMLSGPMGGDQQVGSLISEGKIDMLIFFWDPLNAVPHDPDVKALLRLATVWNIPVANNR STADFLISSPMFNEEVEIAIPDYQRYLADRLK >gi|316920349|gb|ADCU01000001.1| GENE 728 814237 - 814746 288 169 aa, chain - ## HITS:1 COG:ECs1048 KEGG:ns NR:ns ## COG: ECs1048 COG3110 # Protein_GI_number: 15830302 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 8 163 7 163 220 111 36.0 5e-25 MIYRVLQTGALLFLLSQSVFATTLKFGSDIELLAVDGQQLPSALFKSADSLELSGGVHQI LFRVEKMVPAAGPNQRMFTSVPLVVVFDVRDYTSINIKLPKLNNEHDVKAFEKNLSFDLL NNRGNSVEYKSDVLHVSQPLLANYEQAIQRYNSSNATAALPELIKKTSK >gi|316920349|gb|ADCU01000001.1| GENE 729 814938 - 815354 455 138 aa, chain + ## HITS:1 COG:yccU KEGG:ns NR:ns ## COG: yccU COG1832 # Protein_GI_number: 16128932 # Func_class: R General function prediction only # Function: Predicted CoA-binding protein # Organism: Escherichia coli K12 # 1 137 28 164 164 187 70.0 4e-48 MTEQEIKTILQQVKSIALVGASDKPHRASYGVMAYLLSQGYQVIPVSPKLAGQKLLEQKV YATLADIPQPIDMVDVFRNSEAAFGVAEEAIAIKAKVLWLQLGVINEEAEKLATEAGLKV VMDRCPKIDIPRLGLEKA >gi|316920349|gb|ADCU01000001.1| GENE 730 815424 - 815744 300 106 aa, chain - ## HITS:1 COG:ECs1050 KEGG:ns NR:ns ## COG: ECs1050 COG3785 # Protein_GI_number: 15830304 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 106 18 122 122 145 71.0 2e-35 MITSKFGIGQQVRHKLLGSLGVVIDIDPEYSLEVAPDADELGANEHLRHMPWYHVVMENE EGEAVHTYLAEAQLDGENTDAHPEQPSMDDLAESIRHQLQAPRLRN >gi|316920349|gb|ADCU01000001.1| GENE 731 815913 - 817106 592 397 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 3 389 2 386 396 232 32 3e-59 MTARLFLAKGREKSLLRRHPWVFSGAVTRVEGNAVSGETIDVCDFQGKWLARAAFSPQSQ IRARVWTFDQQESVDRDFFINRLQTAQQWRTLLAKRDDLTGYRLIAGESDGMPGITIDRF QNFIVLQLLSAGAEYQRANLVAALQHCYPECAIYDRSDVAVRKKEGLPLTQGSVVGEEPP ALLPIREHGMQILVDIKEGHKTGFYLDQRDSRLAARRFAANAKVLNCFSYTGAFAVSALM GGCEHVISVDTSQAALDVARQNVELNQLDLSKAEFVRDDVFQLLRKYRDEGRKFDLIIMD PPKFVENKSQLAGACRGYKDINMLALNLLSSGGILLSFSCSGLMPIELFQKILADAALDA GRDVQFIEQYRQAADHPVIASYPEGLYLKGFACRVIG >gi|316920349|gb|ADCU01000001.1| GENE 732 817216 - 817494 280 92 aa, chain + ## HITS:1 COG:YPO1446 KEGG:ns NR:ns ## COG: YPO1446 COG1254 # Protein_GI_number: 16121724 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Yersinia pestis # 1 92 1 92 92 115 61.0 2e-26 MSRVSIAAYVAGSVQGVGFRYNTQRQARELGLTGYAYNMDDGRVEVVAEGESDVVQQLVD WLKQGGPRGARVDQVLLEPRPLAHFTQFKIKY >gi|316920349|gb|ADCU01000001.1| GENE 733 817495 - 817824 330 109 aa, chain - ## HITS:1 COG:YPO1447 KEGG:ns NR:ns ## COG: YPO1447 COG2920 # Protein_GI_number: 16121725 # Func_class: P Inorganic ion transport and metabolism # Function: Dissimilatory sulfite reductase (desulfoviridin), gamma subunit # Organism: Yersinia pestis # 2 109 1 108 108 183 82.0 8e-47 MLEFAGRQIETDAQGYLLNSADWSEDLVPLLATEEGLELSEAHWEVVRFVREFYLEFNTS PAIRMLVKAMTQKYGEEKGNSRYLYRLFPKGPAKQATKLAGLPKPVKCI >gi|316920349|gb|ADCU01000001.1| GENE 734 817988 - 818650 774 220 aa, chain - ## HITS:1 COG:ECs1054 KEGG:ns NR:ns ## COG: ECs1054 COG0670 # Protein_GI_number: 15830308 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Escherichia coli O157:H7 # 1 217 1 216 219 259 76.0 3e-69 MDRIVVSSSSSRDSLLSTHKVLRNTYFLLALTLAFSALTATASTVLMLPAPGLLLMLVGF YGLMFLTYRLADRPAGILAVFALTGFMGYTLGPILSSFIASGAGDLIMLALGGTAAVFFC CSAYVLTTRKDMSFLSGMMMAGFVILLVAVIANLFLQIPALSLAISALFILFSTGAILWE TSNIIHGGETNYIRATVGLYVSLYNLFISLLSILGFARSN >gi|316920349|gb|ADCU01000001.1| GENE 735 819483 - 820133 367 216 aa, chain + ## HITS:1 COG:YPO0984 KEGG:ns NR:ns ## COG: YPO0984 COG3916 # Protein_GI_number: 16121288 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: N-acyl-L-homoserine lactone synthetase # Organism: Yersinia pestis # 1 211 1 212 216 276 61.0 1e-74 MLELFDVSYDELNGVRSDELYRLRKKTFSDRLGWDVVCNRGMEFDEFDNPNTRYILGLYE GQLICSVRFVPLELPNMITHTFHSCFHDVSLPAGEVESSRFFVDKSRARDLLGERYPVSQ VLFLAMINYARQYNLNGIYTIVSRAMLTILKRSGWQVRVLKEAYLSEEERIYLLYLPTDS DSQAKMATKINAFEGCSLPEFEHWPMSVAVIKTALV >gi|316920349|gb|ADCU01000001.1| GENE 736 820114 - 820854 356 246 aa, chain - ## HITS:1 COG:YPO0985 KEGG:ns NR:ns ## COG: YPO0985 COG2771 # Protein_GI_number: 16121289 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Yersinia pestis # 1 244 1 245 247 280 58.0 1e-75 MFSIFNKNQIITETLRDYIDRKLSQFGSPEYAYTVVNKKNPSKLLIISSYPDEWVNLYIA NNLQHIDPVILTAFKRTSPFVWDENITLMSDLKVSKIFSLSKKYNIANGYTFVLHDHLNN LALLSLIIDSNMKANLEEQFSSEKGNLQMLLIEINEQMYRLVQSVSVDKDGSEMGVSKAT FTAREHEVLYWASMGKTYAEIATIIGISVRTVKFHMGNVVSKLGVSNARQAIRLGVELEL ITPMQS >gi|316920349|gb|ADCU01000001.1| GENE 737 822072 - 822572 518 166 aa, chain + ## HITS:1 COG:YPO0978 KEGG:ns NR:ns ## COG: YPO0978 COG3516 # Protein_GI_number: 16121282 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 165 1 165 166 265 90.0 3e-71 MASSSFQNEVPKARVNIKLDLHTGGAQKKVELPLKLLVMGDYSNGTEQRPLSERSKIDIN KNNFNSVLSEFQPSIKMAVPDTLAADGTDTAVSLTFNDMKDFEPEQVARQIPQLRALLAM RNLLRDLKSNLLDNATFRRELENILKDDALSDELRTELAALAPKDC >gi|316920349|gb|ADCU01000001.1| GENE 738 822604 - 824151 1601 515 aa, chain + ## HITS:1 COG:YPO1466 KEGG:ns NR:ns ## COG: YPO1466 COG3517 # Protein_GI_number: 16121741 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 515 3 516 516 966 90.0 0 MSVQENKAQGNATAVLEHEAPIMQGVYASLFEKINLNPVSSMTDIETFQNNEGLAEASAD ERVTAAVSVFLDLLKQSAQKVEKLDKTLLDGHIAALDAQISSQLDAVMHHPDFQRVESTW RGVKSLIDQTDFRQNVRIELLDVSKDHLAQDFEDAPEIAQSGLYSHTYIQEYDTPGGEPI AATISNYEFGRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKNTMEEVAAIKDIGNYF DRAEYLKWKSFRESDDARYIGLTMPRVLGRLPYGPDTIPVRSFNYVEEVKGPDHEKYLWT NASFAFAANMVKSFINNGWCVQIRGPQAGGAVTDLPIHLYDLGTGNQVKIPSEVMIPETR EFEFANLGFIPLSYYKNRDYACFFSANSTQKPALYETHDATANSRINARLPYIFLLSRIA HYLKLIQRENIGTTKDRRLLELELNNWIRGLVTEMTDPADDLQASHPLRDAKVTVEDIED NPGFFRVKLFAVPHFQVEGMDVNLSLVSQMPKAKA >gi|316920349|gb|ADCU01000001.1| GENE 739 824169 - 825518 1317 449 aa, chain + ## HITS:1 COG:YPO0976 KEGG:ns NR:ns ## COG: YPO0976 COG3522 # Protein_GI_number: 16121280 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 449 1 450 450 585 65.0 1e-167 MKIDRPLWAAGTLLSPQQFQQQARWEAYTNECIARLALVHPWGIMAAEFDKDALRLGKLK ADRICVRFQDGTLLDTERADVLPPALDLTQVLPATAQSATLLLALPLEHANGGNCLPTDA KADRPIRYRQDWASVQDILGNDTESMAVARYALTLRLDGDENGDYLTCPAVRLVRDVQGV WGVDPQFVPPLLQFGAHAALISYLDRLLTQLHAKRTRLMGMRRESNQRMADFAVADVSLF WLLNALNSYEPVLNDFLAHPALHPELVYRELVKLAGALLTFSLEHDMDAIPAYDHARLGA VFPPLFSLISTLLEASLPSRVITLELEKVRPNQWQATLNDPRLREEADFYLSVRSALPAH LLQTQFPLLCKVGAPDDVNNLINVALNGVPLIPLSHVPAAIPLRLENQYFALDLNHPTAT AMLASGSCAFYVPGTLSDVQLELYAVLRA >gi|316920349|gb|ADCU01000001.1| GENE 740 825515 - 826174 455 219 aa, chain + ## HITS:1 COG:YPO0975 KEGG:ns NR:ns ## COG: YPO0975 COG3455 # Protein_GI_number: 16121279 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 6 216 11 225 228 210 54.0 1e-54 MSKETVIDIDELLQDTWLLVVQLRQGVPVEHGQSLWQHCTKSIEHTQQVLKDAGMHQNAI DHIRYAQCALLDETVLGRPQDDGYSAWHAMPLQAHFFHTLQAGELLYERMREVLREPSPN MAVLTCFHRVLMLGFRGRYGENETPERQQLVAELSQRVKPLDVDQSAPLLVNAAASRRYR WLHSRWVHVAAAVVVLAAVWWGFHSYLTALVTTLLPSKP >gi|316920349|gb|ADCU01000001.1| GENE 741 826187 - 827881 1178 564 aa, chain + ## HITS:1 COG:YPO1469_2 KEGG:ns NR:ns ## COG: YPO1469_2 COG2885 # Protein_GI_number: 16121744 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Yersinia pestis # 439 558 1 120 139 167 68.0 4e-41 MSTTYKRALWAWGGLLALLLCLFWLPLTLLGLIITIVVVLLIVAVGWKRAARIDAHVLDV LTDLPPEHFRHPVVVVCGDNLDALFGSTQMRETPRGCYLRLPVDLRLADFVDSVLAQRTG WSEQISVMRVINPQQQVDAAVLAGQMREFCYQVSRVSKLCGSETSVLLTSYLALPKSHVP DDCWFEWVAGETECSVGIGRSAPRSLIDWLAAHRSDEGEAQQAERFQCAVTVKSWRAWMS EFVLPHCRRQEHSAAACRPVAVALSPVSALGMAEHSLWQQWLASKTTLTDVVGVSSASVA TLAFPDRLFRLLPQQSGFTPLHRAQAIGIGLFTLAAIAALGSSAWHNRQLLRQVSDDIQR YNAIRMTDFIPKKQAVDVLIQDEIQLDNHYRQGVPLRMGLGLYPGERLRQPLLTTIATYV PPPPEKVEQKAKVVIPKAVRLDSLSLFDTNSAKLKSGSTKVLVTALVDIKAQPGWLIVIA GHTDATGNAQRNLALSQARAEAVRDWMRSMGDIPVTCFAVQGYGASQPIASNETDAGRAA NRRVDIRLVPEAGACKLPAKASDF >gi|316920349|gb|ADCU01000001.1| GENE 742 827970 - 828461 531 163 aa, chain + ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 163 1 163 163 288 88.0 4e-78 MAIPAYLWLKDDGGADIKGSVDVQKREGSIEMVALEHSLYIPTDNNTGKLTGTRIHTPLV FTKEVDASSPYLYKAVTSGQTLKSAEIKWYKIDDAGQEVEYFNTKLENVKVVKVAPKMWD IKDPSKEKHNHLEEVEFRYEKITWTFKDGNIIHSDSWNERASA >gi|316920349|gb|ADCU01000001.1| GENE 743 828669 - 831371 1301 900 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 11 872 5 806 815 505 35 1e-141 MGNNSASLLRRLNPYCAQALAAAATLCQTRAHAEITVEHWLLKLLEQGEGDITVIARRYE WDMDGLWQGLLDHLERLPHTIQGKPQLSDKLQQLIKHAWLDASLQENTDAVRSAHLLAAL IGKPNLLATDAVWPLLSISTTQLSRLLPLLDAQSEERPELQTGLQHSQQPSSSNTESAAN EPSTSGVSPMQEAHLAVLNKFTLDVTEKARSGSIDPVFGRDMEIRQMVDILSRRRKNNPI LVGEPGVGKTALVEGLALRIAEGNVPDSLKTVSVRTLDLGLLQAGAGVKGEFEQRLKNVI EAVQQSPEPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYF ERDAALERRFQMVKVDEPDDEMACLMLRGLKERYATHHGVHIQDAAVKAAVTLSRRYITG RQLPDKGVDLLDTASARVRMSLDTVPEQLTQMNAQLAALEMEKQAIEQDLVFSSGADIER LSAIDQLSVELQRQQTALDAQYQQERELTQQLLEVRQDISRQSERAAIQQQLSELQGSHP LLSLDVDVRTVANVIADWTGVPLGSLLKDEQTSLLQLEHQLGERVIGQQAALGALAQRLR AAKTGLTSENGPLGVFLLVGPSGVGKTESALALADDLFGGEKSLITINMSEYQEAHTVSQ LKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGR EIDFRNTVILMTANLGSDELMALLEQQPEASDSMLHELLRPILRDHFQPALLARFQTLIY RPLDAVALRRIVAIKLGQVAKRLQRHYGLTCHIEESLMDTLVAACLLPDTGARNIDSLLN QQILPVLSQQLLQRLAQQRKPDSLTLGFNDEEGITLDFGDEHNGEADTDCSVTTEARVIC >gi|316920349|gb|ADCU01000001.1| GENE 744 831365 - 833893 2050 842 aa, chain + ## HITS:1 COG:YPO0970_1 KEGG:ns NR:ns ## COG: YPO0970_1 COG3501 # Protein_GI_number: 16121275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 579 1 571 571 796 68.0 0 MLNTAAQLMFDHSHHVLKVWDNTAPLDVLAFTAEEHLSQPYRYTIEFTSSAKDIQPAQML MQDATFTLNATPNALASLGAALSMTPPVMQALRTVHGVIQRFKRLSTSRDESRYEVTLVP RLALLAKSHQHAIYQNLSVPEIVEKILRDRHGFKGQDFLFTLAHTYPKRELVMQYGENDL QFISRLLAEIGIWFRFTADPKLNIDVVEFYDDQQHYQFGTSLPLRNPSGMNDVGVESVWG LTSAHQVVENRVTTRDYNYRQAQSWMDGDVDVTRGDKTTYGEAYHYADNYLSAGDKNSPQ PETESGVFYARLRHERYLNQQTLLHGFTTSAALSPGQELKVDGDAPEAFRQGAVIIGISS KARRDQSYEVEFTAIPYSENVCFRPEPTAKPVMAGTIPARVTSTVVNDTYSHIDKDGRYR VSFDFDRDEWQAGCESLWVRQARPYAGDTYGLHAPLLAGTEVAIAFEEGNPDRPYIAYAL HDSKHGDHVTLQNYKRNVLRTPANNKLRLDDERGKEHIKLSTEYGGKTQLNLGHLVDSQK QQRGEGFELRTDDWGAIRAGKGIFISADGQPKAGGKVLEMGAAIGQLQSALELVTALAQS AKVSGALDADIASQQKLSSVINQLSSSGLLVSAPAGMAYTTPKNIQMSAGKTVTTTAGEN IDFSIFKRFTVAAGEAISLFAQKMGMKLFAARGPISIQAQTDSMTLQSDQMMSINSVSGE IVVNAAQGITLVSKGAYIKIKDGSIEIGAPGTIKLKNDNISWGGTASLSASLQPMSVEDP AYKYPMQGGFQVIDKTTNEPKAYIPYRIETDDGSVLRGVTDKNGFTQSHYGIDPQNIKLF FE >gi|316920349|gb|ADCU01000001.1| GENE 745 833911 - 836160 1231 749 aa, chain + ## HITS:1 COG:no KEGG:PXO_04701 NR:ns ## KEGG: PXO_04701 # Name: not_defined # Def: DNA repair ATPase # Organism: X.oryzae_PXO99A # Pathway: not_defined # 37 710 233 887 975 152 25.0 6e-35 MSENNKPVSQGQLDKKENNIITVEHESVDTYFITGTQELILLTAEASKQLDEHAREIMTC VDEHHKASENYSAALENYGKVYSQPEKSAELDNLENEVVAAEKILQEKKDALQSTLGDFE ATGAGYKEVVELIPIATKKKPGSKRGVGSRYAFVKKGYIDKLGVGVRHKVKITGKDKASA SESIFTRDGNKNIKGINTQKIKNQLKELDSDNTGIKYFSAEDIGKVDKTLTDWADSWNKS LARANETDVNANIDVSAGAQFLRFTSNSGASGEWDPYDGKLSFKVEHSSVLSIASGTVSA KFYMPDRIGWPLKYAAEDRVKPLDMGMLRVYFETSLIGFAGASAQVESQIQVTTIGTKQV VMGIREPELPRFRQRRVTGAQFHNARKGKNEDEGLTASAEIFGGAKATLKLAGGVQWLQP KALTEYQGKTGEKAKAAAEFVDFCSISESLVGMAGLGIGGTFKCDFVNGRFCFKIAASLC VGVGAKGSFEAAVDYDKLSDFGGWLIYQLYGLDYAFFELVTKEAFSAFSKVCVMMLTDME SEIKEFLKSTKATVITIEEKFSDFVASIEQGLEASKKRNQLALNIISDKQCLLSYTPESK GMLIYLLTRHGLADHIDTDNRGDEIIPDIYSDRKNAIIIILASIQTQKEWFEVFSHCTAD GSSLSGGNPALKYMVSQKQMNNLRDFLQEGMNRDHEMETIYRRLRVNPAWGYPLVWNNSE AYRLYNGVNLLYSKSAMFSPSSESSSITA >gi|316920349|gb|ADCU01000001.1| GENE 746 836172 - 837143 397 323 aa, chain + ## HITS:1 COG:CPn0148_2 KEGG:ns NR:ns ## COG: CPn0148_2 COG1262 # Protein_GI_number: 15618072 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Chlamydophila pneumoniae CWL029 # 44 268 8 206 246 80 29.0 4e-15 MRSFYKVSCLSFLVLFINGCDQTAADTKTDNSREAELNTIIHKVKSELVYVKGGEFLMGD FGEQYGKEHLPYDANPDSKPLHKVDLTSYSISKFKVDNTEYKFYLAYNNLSGRDVEGGTR KKTRWREANDIPNGPAHVDWYEAEAYCQWLAKVTKLPFALPTEAQWEYAARNRGQFVIAP TNDGTIQIEDRKGINIASEDDRENYSRKIGSSLGILSPMPGDFRPPNPLDIYDMAGNGWE WVKDWYDPNYYQTSPVKDPQGPDKPVYKDDYDGYFYKAMRGQDFSGPGRGLTVVRYKADP KSRDFLPSDKTARCVVNSPEPIK >gi|316920349|gb|ADCU01000001.1| GENE 747 837166 - 838134 487 322 aa, chain + ## HITS:1 COG:CPn0148_2 KEGG:ns NR:ns ## COG: CPn0148_2 COG1262 # Protein_GI_number: 15618072 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Chlamydophila pneumoniae CWL029 # 44 279 8 217 246 90 30.0 5e-18 MKKIGITGFLSFAIVILSGCDQKAANIETDNSREAELNTIINKVKSELVYVKGGEFLMGD FGEQYGKEHLPYNANPDSKPLHKVELTSYSISKFKVDNTEYKFYLAYNNLPGRVVNGGVR TKTRWEEKNGIANGPAHVDWYEAEAYCQWLAKVTKLPFALPTEAQWEYAARNRGQYVIAP TNDGTIRATDGEEKNVATEKDSKAYSQKMGTSLGVYSPLPGNLYPPNPLGIYDMAGNGWE WMKDWYDPDYYQTSPVKDPQGPDKPAYKNDDGYFYKAMRSQDYSGPGRGLTVVRYKADPK SRDFLPSDKTARCVVNSLEPIK >gi|316920349|gb|ADCU01000001.1| GENE 748 838641 - 838898 209 85 aa, chain + ## HITS:1 COG:YPO0866 KEGG:ns NR:ns ## COG: YPO0866 COG4104 # Protein_GI_number: 16121173 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 82 14 95 101 92 59.0 2e-19 MQGVIRVGDKTSHGGVVLSGATSLTFMGKSVACLGDKVSCPKHGNTTIIEGDNNARCNGK PIALHGHRCACGCTLITSLSNAGKK >gi|316920349|gb|ADCU01000001.1| GENE 749 839470 - 840102 248 210 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|238751676|ref|ZP_04613165.1| ## NR: gi|238751676|ref|ZP_04613165.1| hypothetical protein yrohd0001_18030 [Yersinia rohdei ATCC 43380] # 1 206 191 394 395 143 37.0 8e-33 MRIKHDGIISDSDVLLLWHQVLNHEQIRDVIFTSEDDGLLWIDHWLDDKSSTDIAISVEI HLLKEPLQNHVESVSVLILGRADWYLDREVTPKAAIHRPVKIDNLTESLTDALRWGKLVE QGSSDYFFWHSQVSPEMLTEVTITLDSVEHPINQGKSFDLDPTFGLPDKAVGNIALILAC EKAYSENENQLILLRDSSYQVCTVRPLSVH >gi|316920349|gb|ADCU01000001.1| GENE 750 840113 - 843478 3152 1121 aa, chain + ## HITS:1 COG:YPO1482 KEGG:ns NR:ns ## COG: YPO1482 COG3523 # Protein_GI_number: 16121754 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 98 1101 116 1121 1140 1209 62.0 0 MKNKRTSTWVIILCLLIIVGVLIWVTNPVLVLGSESEKLKWTLVLLCVCLFLLFVDGLSL FGLGKLASLDFFNRFKSNGGSVVTNTPVAGRKKAAYITHLRARHGLLWRNKIRILLVVGE NAAAEAIAPGLTTQQWLEGQGTLLLWGGGVQAEPDEAWLLGLRKMRRRRPLDGVVWVMNE QQSAQAGVIDQGCRQLQKRGQILKQQAPVYLWQVCDSAWQQDDRITQPVGCLFPEKNSPE KLAASLQKLVAPLRQRGMTQVLLKNSHDFLLRLANRLEHQGITHWQQALTPLLREYASAL SLRGLMFSLPLAAKSGVAQHGWLPDAAWQGVLSDNSARTRRVGFSWEQSAYYAVMVLALL WLTGSVVSFFSNRSQIATVRDQVDLLNKSNAKPMEQLVALQLFGNTLGQLQYRAAHSVPW YQRFGLSQNDALEDALWPHYDAANQRLIREQAAAELHKSLSELAALPPDSPQRAKLAQAG YDCLKAYLMMANPDKADASFLTRVLGANEPTRLGVGVGLWQGIAPGLWMFYAENLPSHPE WRIKPDQALVAQVRQVLLNQIGQRNAEATLYQKMLQSVAQNYADMGLAQMVGDTDAQSLF ATEQVVPGMFTRQAWEGQVQKAIDDAVSSRREEIDWVLSDNKHPASGDVSPEALKARLTE RYFTDFSGAWLDFLNSLHWKKAQNLSDVTDQLTLMSDVRQSPLIALLNTLAYQGQTGQRS EALSDSLMKSAQNLLHKEKAPVIDQRVSGPTGPLDSTFGPLLSLMGKGAGANGVMNADSS LSLQTFLTRVTRVRLKLQQVANASDPQQMTQQMAQTVFQGKTVDLTETQDYGSLMAASLG EEWSGFGREMFVQPLTQAWQTVLQPSAASLNTQWQTSIVANWNSAFAGRYPFASSGNDAS LPMLGQFIRSNSGRIEQFLTRQLAGVLHKEGNTWVPDQINSQGLQFNPEFLQAINQLSQL ADVLFTDGSQGVHFELRAQPARNVVETQLAIDGQRLRYFNQMESWQSFNWPGATYQPGVM LTWTSINAGARLFGDYQGSWGLIHWLEKAKVSKLDESSYRLAFDTPDGLTLSWILRTQLG SGPLALLKLRGFSLPSKIFIVNAGAADPMSMMGNNNALGDE >gi|316920349|gb|ADCU01000001.1| GENE 751 843478 - 845076 1268 532 aa, chain + ## HITS:1 COG:YPO1483 KEGG:ns NR:ns ## COG: YPO1483 COG3515 # Protein_GI_number: 16121755 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 19 532 22 533 533 612 62.0 1e-175 MLQGLITASMNGRDALVLAGEQVALWDKWLLPISADAPAGEDPGYDDDFQRMREEVNRLS GADTDLVCQLAEKLLTTVCKDVRVVTYYLWARLHRDGEPGLADGLTLLAGVVSRFSDSVL PQRAHSRKMAMEWLASGKVLDSLSRYPEVVKADVERTVAALALLDSAMQAWPEGERPALG ALYSALDVRLAQSGGLDAVVPQNSAPLGMKEEHGNTSSAGLPTLKHIQSGRDLLDQAREL ARYLRDQPQGWLSSSRLMKSLRWDTVHQLPPQDASGNTRLAPPRADNRAQLKRLYMQQSW NELLEQVERMYAEGVNHFWLDLQWYACQSLSKQGHPYDAWADIVKRDLGMFLERLPGLED MTYNDGTPFADEVTRNWIAQHVSGNHEQWTAPPTTTQPQGDDDVLALEGEALAQADSDGV EAALTWLTTRSGMHTPRNRWLLRLLMARVAEQYGKNEMALHLLAELDLNPAQLTLAEWEP ALSFEVKARLLKLLRLKSQRNDSDKAALARRMDTLLAGLVNIDPVRAAVLCG >gi|316920349|gb|ADCU01000001.1| GENE 752 845143 - 846906 1518 587 aa, chain + ## HITS:1 COG:YPO1485 KEGG:ns NR:ns ## COG: YPO1485 COG3519 # Protein_GI_number: 16121758 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 587 1 587 587 939 75.0 0 MDDLTLRYFEAEMRYLREAGKEFAEAHPDRAAMLNLDKVGARDPYVERLFEGFAFLMGRL REKLDDDLPELTEGLVSLLWPHYLRTIPSLSIVELEPDWSQMKHSERVARGFEVMSQPVG QQKTRCRYSTTQDLELLPLNLAKVTLDTEPDGRSVIRLRFECSELADWGQIDLSRLPIYL NADSPIASALHQALTLQMQAMYLRLPGQTDRRRMEGYFSPLGFGEQDGLWPKGESAFSGY QLLLEFFTFRQKFMFVALNGLEHIERPSSLPWFEIDVVLSELWPYDMPFDAENLRLHCIP VINLFPLEADPLRLSPLETDYLLRPMRLQDGHTEIYSVDSVVSSKHTGHQTYVPFSSFRH KGGMMRYDAPERYFHTRVKRGASGLHDTWLILGGEAFDSDKLLAEENLSLSLTGTNGQLP RKALQSTLLDTVVQSTQTKLSVRNLCAPTMPCYPPTRDRFHWRVLSHLGSNFLPMMDNAE VLRGTLSLYDWTGDELNRRRLAAIVDVKHHLIQRFEKGFLLRGVDIEVTLDSNGFSGEGD ISLFGEMLSRFFALYADIHLFNQLTLILQPSGKCLQWKENHSQRIPG >gi|316920349|gb|ADCU01000001.1| GENE 753 846870 - 847955 523 361 aa, chain + ## HITS:1 COG:YPO1486 KEGG:ns NR:ns ## COG: YPO1486 COG3520 # Protein_GI_number: 16121759 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 361 1 359 361 418 61.0 1e-117 MERESQSAHSRLITALQGRMSEVNVYRFCQLLERVAPEKPALGSTASPHDDPVRFRPHPG MGFPVSELKAIEQDEEHPERPLTVRTTFLGLYGVDSPLPTSYLDDIAQGREGHEALEAFL DIFNHRIFTQFYRIWRKYSYPATFQVGGTDETSQCLLGLIGLGIPGTSSHIATPVSRFLA LLSVMRLPTRTAEGVMALVRLLAPKTTAIVTAHDRQQIVLQKPAGLGPTHRVNLSQRAVL GATGTDVNTQMLLTLHTTDLEEAKGWLPGGQLHTDLMVLLRVYLGWRCNARLKLVLPTVL LPPPVLGKTHVQLGLTGLLGLHAAQSAAFTLPDEITVNLGHYQGLQPNTANREVRHVNFR F >gi|316920349|gb|ADCU01000001.1| GENE 754 847936 - 848484 431 182 aa, chain + ## HITS:1 COG:YPO1487 KEGG:ns NR:ns ## COG: YPO1487 COG3521 # Protein_GI_number: 16121760 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 21 181 1 161 162 202 63.0 3e-52 MSIFAFKSHSFQAGAVVLSALLLAGCGLTQSVADGTVSVTKSIFYKQIKSLHLDFNAREA LNTDANDMSALSVPTMVRVYQLRDSKAFEQLDYQSLLVDGDASLKTDLLSSREVVVKPGT GALLNMPMEKEAKFVAVVGLFRMPDTQKNSWRLVIDREDLLPDDPRVIELGNNALSLKPV KD >gi|316920349|gb|ADCU01000001.1| GENE 755 848488 - 848925 500 145 aa, chain + ## HITS:1 COG:YPO1488 KEGG:ns NR:ns ## COG: YPO1488 COG3518 # Protein_GI_number: 16121761 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 3 144 4 145 150 181 71.0 3e-46 MSSQNPSLYEMLTLNFGGELDLHLVSERDQVILSVLDNMQRILNSRAGTLAHLPDYGLPD MSQILQGMPGSAHGLLSMLSATLLKYEPRVESLAITLLPQTRSGHLEYTLEAHLKDVGLV RYGTEFAPEGKVLVRHLKQQQFVSA >gi|316920349|gb|ADCU01000001.1| GENE 756 848967 - 850331 1101 454 aa, chain + ## HITS:1 COG:YPO1489 KEGG:ns NR:ns ## COG: YPO1489 COG3515 # Protein_GI_number: 16121762 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 448 1 448 455 358 48.0 1e-98 MPSFSEQHLRTGGDPRTLSEFSALRDELGKLTHPARPDVDWQKVEQLCLALFRQNGVELQ TTAYYTLARAHRAGMAGIEEGLVLVDGLLTHQWPVFWPQQTHARMEILGWLASRLQQLLR GYVFKYGDLALIYRTETLLEHLGEVLARLELKHLSQLDGLYHLMHNTALRLENLDGDNVV QGGSTLAARPTMDISGTEIRDDSPLVYVVQAEAKPVVMRVENNSRGIQKSHWQGFVAGLI CTALVGCAGLWGWHALHQEPVLNTLLATVQPLPNTLTAEQITSLRTDKADKLPTLTNEML AATQTQLDSLRQLPAMWPLNYGSQLVKQAQTLWPKIPAVEQLAAKWQLSLNAQAASNETL NDWNLAQMRLQQLANKLNGLDEQRGKYITVSELKSSVFAIQQPLAKSPPLEELLRQLAEQ QNAGKVAPALMMQIDNRFKQLQSRYMLLTESKTE >gi|316920349|gb|ADCU01000001.1| GENE 757 850377 - 852764 1428 795 aa, chain - ## HITS:1 COG:PA1408 KEGG:ns NR:ns ## COG: PA1408 COG3264 # Protein_GI_number: 15596605 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Pseudomonas aeruginosa # 30 783 41 790 807 534 43.0 1e-151 MLKMLKISAVLSLLLMFPIISIAANSTVPQATTATQSDSGFLQKKLDAIKQQVANSQNEK TLSLLNTETLQLVEEAQTKLAELTPQITQIQAQLDVLGPPAPNETAEVTQQRKTLNRAKT LLDKQIDQADAVKTNATNLSTQINNLRRSALKSQIALNSGSVLGQNFWLPLISSQNHDLA KFSNFQQQIVDAWDDAWSPDWNTGSAFYLLLALAFGIGSQVILDKPLSAMMQRWLPEGRL RRSVLAFSTTLLTALCLGIGAHFLCYIFIRQPDTAPELLEFTQTLVRLTVFSSLIAGLGK ALLSNRHPSWRLPNISDTAAKKLAPFPPLIASTIFVFSILEQLNNLVGSSIAATVFCSGL LALFVALIAITMSVRVTHLRHANAANNEQTVVRSALAGFIHLAISATSFSIIISLLTGYI LLARFLTYELIWVWLVLASLYLLIHLMTDLCDSIFMPNSRSGKILKSTLSLSDRHLSLAS TLLSAIGKTMLVLLAIVALLSGTYGTTTPMALLQKVVEIWGGKGLGGFTIIPAHALNAVL CLVIGWYILRSARRWLDNDFLPKTMMDRGMRASLVTLFTNVGYVLIILLTLSTLGIEWNR LAWIVSALSVGIGFGLQEIVKNFISGLILLTERPVKVGDLISISGVEGDIRRINVRATEI QLSDRSTVIVPNSQLISQNVRNATMGNAQGVVTIALTFPLDIDPEQTRTLLLDAYLQHAA IQSAPAPSVSFKELGPNGIVLSVTGYVASPRVVSGTKSDLLYEILKRLRAAGISLSQSQT MVIERVPAANKEVSE >gi|316920349|gb|ADCU01000001.1| GENE 758 852934 - 854310 870 458 aa, chain - ## HITS:1 COG:ECs3025 KEGG:ns NR:ns ## COG: ECs3025 COG1538 # Protein_GI_number: 15832279 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 3 446 62 504 505 430 50.0 1e-120 MPQTDLSQIHIVDAPEGALREWPGNHWWQNYHDPQLNQLVALALADSPTLAIVRQRVEIA KSQTDRARANDLPIVNFGADVERQKMSAEGVMGPFALDDPAAGTTGPWYTSGTFGLQASY DLDLWGKNRAQVQSALGVYKAKQAELAESELLVSSAVTQIYWDIQTVKALQDILLEIKKQ ESLINDTDRRLYNEGIISSLEQTQTETQFAKIDEQIDAYTGNLLLLRANLQAMIGLKNPL PALETVPLPDVASTMPQNLNYELLARRPDLQAAHWYIDASLSEVDAAKAAFYPEINLMGF LQNDALHLSDLFRGSAQQMGGIFGLTLPIFDGGRLNANLSIMQDNSNLSIANYNKAVVSA VTEVTKGITQLDTITHQRTHQAVVVAGDKKIWSLTQQRFQAGLISGVNVAKAKLPLLAEQ TKLIELHGRWIDADINLIKALGGGYRAESLPVASKSKS >gi|316920349|gb|ADCU01000001.1| GENE 759 854809 - 856290 998 493 aa, chain + ## HITS:1 COG:AGl1863 KEGG:ns NR:ns ## COG: AGl1863 COG0366 # Protein_GI_number: 15891048 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 490 12 501 506 647 63.0 0 MKKTTLFQFFHWYYPDGGKLWPEVAEKAEYLAQLGMSHVWLPPASKGASGGYSVGYDSYD LFDLGEFDQKGSVPTKYGDRGGLEQAAQSLQSHGLQVLFDVVLNHKLGADEKERVFVRRV EEHDRNDIDDHTFEALTYTRFTFPGRQGKYSEFVWDFRCFNGVDYIEDPDENGIFKIMND FGDDGWNDDVDKENGNYDYLMGADVEFRNEAVTEELKFWGRWLLDSVPCDGFRLDAVKHI PSWFYSQWLDHLREHSGRELFTVAEYWSPEVGALENYLNETEHKVMLFDSVLHKKFHHAS KSGNAYDLSTIFADTLVAIAPENTVTLVANHDTQPLQSLEAPVEPWFKPLAYALILLREQ GVPCVFYPDLFGATYTDKGDDEQDHEIIMPIIPELEKLLEARQRFANGAQHDYFDDPQCI AFVRDGTGEAPGCVVVLTNGDVAAKHVQLTEGLAGRRFYDFLGNHEDIVTAGDDATADFP VSAGSVSVWVLEQ >gi|316920349|gb|ADCU01000001.1| GENE 760 856297 - 857280 527 327 aa, chain - ## HITS:1 COG:PA4653 KEGG:ns NR:ns ## COG: PA4653 COG5430 # Protein_GI_number: 15599848 # Func_class: S Function unknown # Function: Uncharacterized secreted protein # Organism: Pseudomonas aeruginosa # 38 327 34 315 315 106 31.0 5e-23 MRGIIHLIFILCGGVLFSSTASALTTHDCTLTKPVLINYGSQSSVVVNTTSQTQVFNVQI SCPIVLAVAAPGSIGITYTKSTTTSGSRALLTNGTTDSIPIQLVCVTPTCSPAVEIGVTG TQSIPSSTFLGLLTNQQYSLPLSVNTIVGQSVAAGTYSTTLTVTISWNICTAGALVLCLN NDTGTDTLVIPVTLVVTNDCATITAPDINFGSAPVAGSFSSQANTITLVCTKGATYTVGI NNGLHASGGGRNMLNGTTNLLSYDIYQSTSNNRWGSVGSQRWSSTAATTTSADTMTKTYN YVAKIFPNQTTPPAGLYTDTLIVDVAF >gi|316920349|gb|ADCU01000001.1| GENE 761 857282 - 859651 1269 789 aa, chain - ## HITS:1 COG:PA4652 KEGG:ns NR:ns ## COG: PA4652 COG3188 # Protein_GI_number: 15599847 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Pseudomonas aeruginosa # 5 780 17 782 790 594 42.0 1e-169 MPLMVTLSLPSIAYADLGSTDLPPPPTASVVNQEQQFRLELVINRFNTGKLIPLVERNGH FFVQSNTLISFGLPADKFTSVETDVSAMPELNARYDSENQRLLVQVPTDWLPNQSIFTGN PTQQTHALAGSGALFNYDVYTSHTQDNATLTSAWNELRIFTPNATFSSTSILRKSMGGNA DSSNEGFRRYDSTLSGVNETNAISWQVGDLVTGALSWSNSVRLGGVSIGRDFSVRPDMIT YPLPAFSGQTAVPTTADIFINGYQSGSTNLEPGPFTLTNLPYVNGAGEAVLVTTDALGRR VSTTQPFYVASTLLKPGLSDASLSLGALRRDYGEKDFSYGPAAISGSYRYGVNDDLTLES HAEGAQELALTGLGTLVKLSYLGVLNASATTSTMYGKRGNQYDWGYQYSNSRFNIGTQHS RRDKNFGNLALYDIPTNTSDPASYSLSKSSDQYSAALSLDRFGSLGLAYFDIKSFAGDRT RLLNLSWNKNLWGNSTLYVSASRDPSQQDWSLALSIQIPFSTFDNISLTTQRNATGERQQ TIGYNHAMPSDGGFKWDLAYANQSEQNNYQQATLGWRNEHIQLQGGVYGPSNSYTQWGEM MGSLVYMDNTLLAANQINDAFVVVSTDGYPDIGVNFENQPKGVTNRHGYMLIPGVSSFYP SKFSIDTLNLPADIYADTTEQRLAVRRNSGYLVHFPVRERRAASVILHDQTGAAIPISSS VTREGKSDAYVGWDGLAYLEDLERQNVLRVRTPDGLRCVVNFSLPDNHSQKLSTYGPFTC QLKKSSEND >gi|316920349|gb|ADCU01000001.1| GENE 762 859711 - 860475 495 254 aa, chain - ## HITS:1 COG:YPO1697 KEGG:ns NR:ns ## COG: YPO1697 COG3121 # Protein_GI_number: 16121957 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Yersinia pestis # 19 244 11 241 250 196 46.0 4e-50 MSKRVNSICPIPYIFIGTLLVCIAAPITAFSATNMLIWPIDPALGAKDNATELWLENKGT SVATMQIRVLGWQQVNGEENYRNQQDVVASPPIVNISAGKKQLIRLIRQSPTPAGKEQAF RILIDEVPSPDHSSANQAGVSLLMRYSLPLFVYGDGVNFQRNASQPVQLNQSQLSWKTIT NNGHPALEVTNQGAIHARLSKVSINGKPIADGLLGYVLAHSKRVWPLPPSVSRGENLKAE VNNDANIWQSGPTP >gi|316920349|gb|ADCU01000001.1| GENE 763 860491 - 861027 292 178 aa, chain - ## HITS:1 COG:PA4648 KEGG:ns NR:ns ## COG: PA4648 COG5430 # Protein_GI_number: 15599843 # Func_class: S Function unknown # Function: Uncharacterized secreted protein # Organism: Pseudomonas aeruginosa # 16 178 5 182 182 59 34.0 3e-09 MNTQGSGVINGVVSSISAALLFCCVTAQNAYAVISAQFQAQATIAAGCALLGTGSLFGAL SFGSYSGTTSGSINGTFVQNTTLTLACTPGVTLSMKVDGGTHQTTVRNVMQSGNSLQLPY RIYSDAAHTSEILINQTVPLNITGTNNNIILPIYGVLQLNGFSPSGSYTDTLTVTLTW >gi|316920349|gb|ADCU01000001.1| GENE 764 861034 - 861603 281 189 aa, chain - ## HITS:1 COG:no KEGG:EFER_1135 NR:ns ## KEGG: EFER_1135 # Name: not_defined # Def: putative type I pilus protein CsuA/B # Organism: E.fergusonii # Pathway: not_defined # 1 189 18 206 206 130 50.0 2e-29 MKLRFIFAIAASANLLAVPAMAVTTTGTVSVTLNLTNGCLVNGSPSQTGVNFGTLSFGSS PATFDSLTASFSGGGSGGNTFNVQCTSGVTYSVALTSSVNPKPTTVYGTEGTPGRYLISP PATTQGIAYSVYDNSNMTTALTNGATLTAVSTTGTTGSYALWGKIVGVANNTNVQAGAYA DTLNITITY >gi|316920349|gb|ADCU01000001.1| GENE 765 861972 - 862103 70 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGKSIMQSFHAFLKNHSQFMAAFWSIMIIVFETSIALYIIRNI >gi|316920349|gb|ADCU01000001.1| GENE 766 862206 - 862874 535 222 aa, chain + ## HITS:1 COG:ZchaC KEGG:ns NR:ns ## COG: ZchaC COG3703 # Protein_GI_number: 15801449 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in cation transport # Organism: Escherichia coli O157:H7 EDL933 # 1 220 1 222 231 203 45.0 2e-52 MLTRKLLESQDFAKTYSALENLFWTPAQLDASLNHMIETCPKDQGIWIFGYGSLIWNPLL EYAEVQPAHLKGWQRDFNIRLLAGRGSEHTPGRMLGLKPEGDTRGLAFRLSDDNARCELQ LLWTREMLAGVYTPKWCPLSLADGREIFGITFITDPKHPLYESNSTLNTVAALISQASGS LGSNAEYLFSLDSALEQHRIPDNNITELARCVRQIQQNAPTR >gi|316920349|gb|ADCU01000001.1| GENE 767 863077 - 863784 223 235 aa, chain - ## HITS:1 COG:ECs0271 KEGG:ns NR:ns ## COG: ECs0271 COG0582 # Protein_GI_number: 15829525 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 230 90 319 324 315 64.0 5e-86 MRSLLRIAANEWGWLNSVPVVKAKSPRGRRIRWLTKDEARRLLDELPVHFRSVVMFALAT GLRRSNILNMEWSQIDMQRKMAWIHPEDAKAGRAIGVALNDTACSVLRGQIGKHHRWVFV HEDSCIRPNGEVAPKLRKMRVDSNKAWRSALKRAGIEDFRFHDLRHTWASWLVQSGVPIS ALQEMGGWESVEMVRRYAHLSPNHLTEHAKQIDVVFGVYGTNTTQGEMAELKEVM >gi|316920349|gb|ADCU01000001.1| GENE 768 864467 - 864685 104 72 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1001 NR:ns ## KEGG: Ent638_1001 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 71 1 70 71 75 45.0 6e-13 MTAEQDNAIRNVARRCNEAMKSAIKSAPKKTNIDTITRPILLSYYDTIKPLGIPFVRFLW IIGVLNGQFEDK >gi|316920349|gb|ADCU01000001.1| GENE 769 864687 - 865253 135 188 aa, chain - ## HITS:1 COG:all7280 KEGG:ns NR:ns ## COG: all7280 COG4725 # Protein_GI_number: 17233296 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Transcriptional activator, adenine-specific DNA methyltransferase # Organism: Nostoc sp. PCC 7120 # 3 174 9 190 210 113 34.0 2e-25 MNKYKLIYADPPWTYRDKAADGERGASFKYPTMSILDICRLPVWDLADESCLLAMWWVPT MPVEALKVVDAWGFRLMTMKGFTWHKTNRRKGNSAIGMGHMTRANSEDCLFAVRGRLPER MNAAICQHQTFHRAEHSAKPPEFRDLLVSLLGDVPRIELFARQQADGWHSWGNEVGCNIE FQQGVKAA >gi|316920349|gb|ADCU01000001.1| GENE 770 865250 - 865549 194 99 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTQYTSLRRGFLLPKFGGFMRHIIKGHPERTERAAMKAALNLHQAKFGDYGPTKKGVTY YLQVEDEKFAIEIINREKSYVATSMMRPRELSKVWGNAA >gi|316920349|gb|ADCU01000001.1| GENE 771 865554 - 865781 151 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMPPLDDDQILRFKSFFNEQLSHEIKTEMKNMTGPPDALYKSGENWRDSPDLVNIFEENK DFFGYDYVRDSDLED >gi|316920349|gb|ADCU01000001.1| GENE 772 866137 - 866466 211 109 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSNMSKKRSIGRMIARAKAIANKPDAKSEMELLKTPPKNRTEAKKQLALKLKLVRSGALD SKSLRTLSKQSEQALLIANALRFDEGLVDSVSTDKTSDSNKRWRGRTAD >gi|316920349|gb|ADCU01000001.1| GENE 773 866510 - 866785 167 91 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MANRTANRKARRLLGMSYRISNKPNNIAFLFPIPDFWRFQLPEHLQSHDVVAVKPAPYTL MGMLCDGYGYYPVSAFYPSYISAKVKVREQK >gi|316920349|gb|ADCU01000001.1| GENE 774 866786 - 867697 449 303 aa, chain - ## HITS:1 COG:XF1763 KEGG:ns NR:ns ## COG: XF1763 COG0175 # Protein_GI_number: 15838364 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Xylella fastidiosa 9a5c # 11 200 16 210 280 117 38.0 2e-26 MAKQRLLILNSGGQTSAYMTRRLLTEYADEYEMVVVFANTGQENNETLDFVRDCDVNFGF NTVWIEAVVHAGRVATSHKVVNYETAKRSGEPFEQVVEKYGIPNHSYPHCTRELKENPIH SYVRSIGWKKGEYLTAIGIRADEPRRVKRSVSKQTGQIRIYPLVDMFPTDKLDVLDFWEQ QSFRLQLKDYQGNCKVCFKKSDKKLQQIYRDNWHHFDIFAYLENQYGQVGGNSIKGKPSD EPRKFYRGYRSVRDLIASFDLSQPLPPVDDEETNEGCASSCEPFMSDEESPAWGAEAMAQ EQK >gi|316920349|gb|ADCU01000001.1| GENE 775 867699 - 868979 870 426 aa, chain - ## HITS:1 COG:no KEGG:SeD_A0606 NR:ns ## KEGG: SeD_A0606 # Name: not_defined # Def: Eaa protein # Organism: S.enterica_Dublin # Pathway: not_defined # 145 260 83 197 360 173 72.0 1e-41 MSKFTTEITIEELQYRIHAHENDLTQMWTADYFLSVQKELLALKQAAKNPVAYRNKFTGR FFTLEQQQNAAADTAVYEPVFLAAPVLPKQPELVVLTDEQIDAVLDSKANMAYIISDKRE RLRMFAREIIRTAMISTAPAQPVIPEQAKREQVRREHAEWSDATFGNVGPVGPLKHLSKE ALEAAAAPDDLLEWADMQFLLWDAQRRAGIPDDFITVAMIEKLEINKKRQWPEPKDGEPR LHINTQSAQPVIPEQNKFRDLSQPVDPQISEYEKALQNEPQNIPENIPAPLDAQDLELYV DMLENSDSDDEDGELNNTQLIVWLKELQRRRELPAQPVSEPYKLPQGYALVPCKLTAESG AKSCMIGKFIEQTEISCPECFGDDECETCDGSGTIEVTAHVSWTTIKDIWAKGIEHFAAA PAQESE >gi|316920349|gb|ADCU01000001.1| GENE 776 868972 - 869154 86 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTKLTPKQIEVLSCVCNGEKTYAICRQTLNALLRKGLITRTVVGYSITAKGIDAKEKSNV >gi|316920349|gb|ADCU01000001.1| GENE 777 869147 - 869359 183 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHSNSKERYTFRGRKAARTEYYEKFVKGWKLRKCGACNGSGYYDHNGSPDCGACDGTGKE RCKPEEQSND >gi|316920349|gb|ADCU01000001.1| GENE 778 869349 - 869729 211 126 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNDLPIQTYESVVQQRDALAAENAAMKENIENVLSHWAAAEPVDMSWMMDKCMPSLRDSC IETIATDEFTRELMVKGVESGAEYFRSRAKCARGLGHHDRACFLDTTAEMFDEFAAELRK GINDAQ >gi|316920349|gb|ADCU01000001.1| GENE 779 870144 - 870824 417 226 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1387 NR:ns ## KEGG: ECUMN_1387 # Name: not_defined # Def: exonuclease from phage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 2 225 1 226 226 296 60.0 4e-79 MISPELILQRTGINVLTAEQGGEDWKALRLGVITASRAHAVLATGRGGKGWGEKKKSYLM ELVAEVCTGQSPEIFGKPLEWGTEHEAEARTLFEFMAGKNVSTENIMFKDETLRTAASPD GICSDGYGLEIKCPFTTTVYLDFRVNGVIKPEYIAQCQYSMWVTGATGWYFANYDPRMKR EGLHYVLLERDQETMAQFDEMVPEFIEAMDSVLSDLGFQFGEQWKV >gi|316920349|gb|ADCU01000001.1| GENE 780 870821 - 871735 391 304 aa, chain - ## HITS:1 COG:ECs1933 KEGG:ns NR:ns ## COG: ECs1933 COG3723 # Protein_GI_number: 15831187 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecE pathway) # Organism: Escherichia coli O157:H7 # 62 211 79 230 269 60 28.0 5e-09 MSNQQVINQVYGLINPLQTEFEQICSEPSISFKRESEFAMQIFANNDYLAGVAINSPVTT CSAIKNVAAIGITLNPAQKLAYLVPRKGRICLDISYMGLMHIAQQSGAIKWCQSSIVRKN DKFMRTAIDRPPVHEFNEFGTTEERGEIVGAYCVVKTDDGDYLTHTMRIADIFAIRDRSE GFKSGKSSPWRTDEEQMILKTVVKQAAKYWPRRERLDAAIDYVNTDGGEGINFKEERTEK DITPVSDESVKAITDLLIKMNKNWDDDLLPLCATIFRRPFSNATELSELEAHKVIDFLNK KAAA >gi|316920349|gb|ADCU01000001.1| GENE 781 871732 - 872019 198 95 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNASVIIELNKIISGFSEQTSELVLQQAEAWEKETKQYHIIKALSHLSGLSHEALELALE HGDNPEILATALFSILQSASQYQTAIELKHMQEAA >gi|316920349|gb|ADCU01000001.1| GENE 782 872138 - 872251 99 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQELSFAGCPRMGTLRESQLDRIVRIVTQFFSPLWSK >gi|316920349|gb|ADCU01000001.1| GENE 783 872341 - 872685 251 114 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTDLDFWEECISLGAEDCDLTLTPEQLKCLAESVSAGHENYGMAFYSPPDSDRYDDLERE SQSKLKKLQAEFDDYRNNAESAVKQALGQYRDANVSIGDHGEVFRHDGRTEQIQ >gi|316920349|gb|ADCU01000001.1| GENE 784 872814 - 873191 272 125 aa, chain - ## HITS:1 COG:no KEGG:ECL_01299 NR:ns ## KEGG: ECL_01299 # Name: not_defined # Def: GP38 # Organism: E.cloacae # Pathway: not_defined # 1 123 1 115 118 115 54.0 3e-25 MKHTLKVYKDSETYPDYMKVRFDKTNTGTSFPFNGHRWAYEHTAFDDSGDYDLLYRFDDE PYPEEKSNSVDELTARDYFAAKAMASIVRRYDGHSFGGGPKSPQYKELAEDSYFIADAML KARGE >gi|316920349|gb|ADCU01000001.1| GENE 785 873263 - 873493 189 76 aa, chain - ## HITS:1 COG:no KEGG:ECDH10B_1326 NR:ns ## KEGG: ECDH10B_1326 # Name: N # Def: regulatory protein N # Organism: E.coli_DH10B # Pathway: not_defined # 2 73 26 97 98 90 68.0 2e-17 MKKLSDKDYRDLTPKQAQKISADKDWIGMDLIKRRHELHALSVELGFAERRDSYHAIELR DSWHVFNYQPREPNAA >gi|316920349|gb|ADCU01000001.1| GENE 786 873726 - 874313 381 195 aa, chain + ## HITS:1 COG:no KEGG:SSPA2255 NR:ns ## KEGG: SSPA2255 # Name: not_defined # Def: superinfection exclusion # Organism: S.enterica_Paratyphi_AKU12601 # Pathway: not_defined # 1 191 1 191 195 300 82.0 2e-80 MNNSWWQELMRFFLQGMTLKQLIHMLIILIFLIVVMPVSVKEWVNLHNPEILPQHWMYYI LLFCVSYVLNGIVNSGYNAVAEKIEASTAKRSKALKEKVVRDLFDSLTLGERAYLAFAIA SNNKLKTKKGSEESISLLEKGLLIRLPPVIGYPDTDRFVIPDNYFNECYMRFAGKSDSLM DELIEQDKQVKNSLV >gi|316920349|gb|ADCU01000001.1| GENE 787 874457 - 874666 129 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTMAKVRAKVAARKIQAIAGRKAEDRTVKALSLPTPVIRGEEEVTGSCCLPQVAIFAAGH RKSENVTAR >gi|316920349|gb|ADCU01000001.1| GENE 788 875088 - 875780 274 230 aa, chain - ## HITS:1 COG:STM0898 KEGG:ns NR:ns ## COG: STM0898 COG2932 # Protein_GI_number: 16764259 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 3 230 4 231 231 291 64.0 8e-79 MNKIGNKIRQIRKAKKMTILELANAVGSDVGNISRLERGIQGYSDAMLRKIADGLSVHIS ELFSTEDDGGTVDSYSVKSLSESGRKNVYRVDVLDVSASAGDGANTGDVVEIIRSIEYVP EYAKTMFGNRPQGSVMLINVRGDSMTGTLEPGDLIFVDTLAKFFDGDGIYVFDFNGDTFV KRLQKVKFELKVISDNKAYETWSVTPDEMDMLHIQGKVLISQSQQIRRHG >gi|316920349|gb|ADCU01000001.1| GENE 789 875802 - 876107 232 101 aa, chain + ## HITS:1 COG:STM0898A KEGG:ns NR:ns ## COG: STM0898A COG1396 # Protein_GI_number: 16764260 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 29 98 6 75 84 66 48.0 1e-11 MRLAQSVLRKLNMWHNMRNAHLWRFYMQTPLRKMRVEKNLTIAEVALATQIDVGNLSRIE RGKQITSLDKATKIAEFFGGAISAMEILYPQQFMKSGSKAA >gi|316920349|gb|ADCU01000001.1| GENE 790 876242 - 876520 236 92 aa, chain + ## HITS:1 COG:no KEGG:ECO26_3371 NR:ns ## KEGG: ECO26_3371 # Name: not_defined # Def: putative phage regulatory protein CII # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 92 1 92 92 109 65.0 3e-23 MEHATTRNKARAIESKLLNKIAVRGVANIAEAVGVDKSQISRWKEALIPRMSMLLAVLEW GVEDEELSRLAKKVAVMLTNEKAPNCANSFEA >gi|316920349|gb|ADCU01000001.1| GENE 791 876555 - 876716 147 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKRRKSNREEERRYPDSPDGLVVVASNNRAFAERLIGVYRLAKAGVKNDGRR >gi|316920349|gb|ADCU01000001.1| GENE 792 876703 - 877554 191 283 aa, chain + ## HITS:1 COG:no KEGG:SeSA_A0620 NR:ns ## KEGG: SeSA_A0620 # Name: not_defined # Def: GP59 # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 283 1 284 286 394 73.0 1e-108 MGVVKQLSDYRPPLEAVERRVSEIEDGYTRLANGLYEELIGADLTKNQSKVAHAICRKTF GYGKKMDRISDSQLAQITRLPRQKVNKAKNELINMRVIIREGQQIGPNKRIDEWQIEGCH HSIDTVTKTVTKNVTKTVTALSPKQGHTKETITKEKKENKNTMSEQVRTECKKSPSLHEE TDRAFEEIFWLAGMVKGGKAKAKSAFRTQFKAWRKESGGTPEQFAKFLADDIASRKGKQF GFDKLHPSTYLNGQRWNDEKPAPEPTQPTNSKFSIGSNGLVFY >gi|316920349|gb|ADCU01000001.1| GENE 793 877669 - 879549 671 626 aa, chain + ## HITS:1 COG:no KEGG:SPC_1284 NR:ns ## KEGG: SPC_1284 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_C # Pathway: not_defined # 1 625 1 623 626 1007 74.0 0 MTPSELSGLLWDQVERVAHYLLPNGKKDGHEWVAGSTDGEKGKSLKVNLAGKRVWADFAA GEGGDLLDLWIAVKDCSLHQAMSEAKEFLGIKDDDHHFAAKQQKKFSKPKPENIRKFLRK TDDCFAYLETRGISRETAEAYKVSSAVVWSHDEQRELPAIAFPYKRDDQLLQVKRISTER PNGKKVIMAEGDCEPCLFGWQAMPKNIRIVVLCEGEIDCMSYHQYGLPALSVPFGGGKGA KQQWIEFEYHNLDRFDEIWISMDGDEVGQAAAKEIASRLGEHRCRLVKLPHKDINECLQA GISSDEIIGLLEKAEYFDPEELYSAREFYQETVKAFYGKEQSMFYSPWEPLNHNFAFRES ELTLVNGVNGHGKTEVVGHMVLQAMRQGVRTCVASLELKPAILLKRLTRQATCAKLPPEI EIESAFKFYDDRLWLFGLTGTAKADRLIEIFQYARRRYGIELFVIDSLMKCGIGDDDYNG QKAFIDALCDFKNKTNCHVILVTHSRKGDSEEKPTGKMDVKGSGSITDLTDNLFIIWRNK PRERALQKQESGQELSDSERELLGASASVLSLEKQRNGEGWEGRIPLFLDPQSHQFLTME TQSPYNFVANMPASEYDQVWMSDNVA >gi|316920349|gb|ADCU01000001.1| GENE 794 879562 - 879936 343 124 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTSREQFEETFRKAYPDIPQPHKDTMLEWYNHGTDDEPDWGYYSLLARQAFEWWELSREA AEIESTAQHVTQEKSKPYAWAIEHKVGLPTVVFNKPNTNSWAFKDAVIKELYEAPALEKS DDKS >gi|316920349|gb|ADCU01000001.1| GENE 795 880617 - 880859 120 80 aa, chain + ## HITS:1 COG:no KEGG:PAU_03126 NR:ns ## KEGG: PAU_03126 # Name: gene0072 # Def: hypothetical protein # Organism: P.asymbiotica # Pathway: not_defined # 1 80 70 148 148 119 82.0 3e-26 MDEHSQFDRFRKDLTILAGFYEQTVRLNGEIRTEAKSLAYANMEADEFERCYNAMINAAI KHIFAGTRDENILNQLQSFF >gi|316920349|gb|ADCU01000001.1| GENE 796 880922 - 881155 216 77 aa, chain + ## HITS:1 COG:no KEGG:Ctu_11230 NR:ns ## KEGG: Ctu_11230 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 7 68 5 66 67 76 62.0 3e-13 MRDKLPRNFGWDRHKLATLTYEELERLEADVKENHECRNGIYIYDAAGRKKLDALSWAVY YKNKSDRAADPEPPEAA >gi|316920349|gb|ADCU01000001.1| GENE 797 881515 - 881883 82 122 aa, chain + ## HITS:1 COG:no KEGG:E2348C_0681 NR:ns ## KEGG: E2348C_0681 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_0127 # Pathway: not_defined # 2 122 9 130 130 90 37.0 1e-17 MLTFKHFKDRPSWAAADGYDFNIIDCMSEAAGRINIWRGIVDAILEIPDFELREAWYRLP ISLVAVAIALAWPLIFWIVGLDSYVKCIRNRRKYLNTKSEIVLYNLAVWRRECDRRIKRA QG >gi|316920349|gb|ADCU01000001.1| GENE 798 882698 - 882874 119 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKFDCAFDIHRLPHLFFPLSPRDVMNTPFTIAWRLASLSLRYLDMVSLLMCKRRASSL >gi|316920349|gb|ADCU01000001.1| GENE 799 882845 - 883615 157 256 aa, chain + ## HITS:1 COG:no KEGG:Ctu_11610 NR:ns ## KEGG: Ctu_11610 # Name: quuQ # Def: antitermination protein Q homolog from lambdoid prophage Qin # Organism: C.turicensis # Pathway: not_defined # 1 255 1 253 254 273 55.0 3e-72 MNIESTVKFHSPKSTQISDSPRATASDALTNTDVMCALGMVQSRAPLGFAAFNGKMNISE NDKKRSVQLLTQYGLKYCDKVAALRKLDMNIKVKVVQTLAKFAYKDYCRSAAGTEQCECC KGAGVIRAKAKVMKHAGCGNTPPKYAEEVTHTMCPKCNGKGEVSVACCKCNGRGEAVNRE ETERQGVPVKHTCKQCSGRGYERIPAQKAFRAICAHTDAISATVWDKAIKPFYEQLITEL LSSEEGANRELAKVTN >gi|316920349|gb|ADCU01000001.1| GENE 800 884237 - 884506 214 89 aa, chain + ## HITS:1 COG:no KEGG:KPK_3374 NR:ns ## KEGG: KPK_3374 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 89 25 113 113 144 83.0 8e-34 MTRMSTIYSRLSYGTGTALTGCGVSAKAYAETTKEVSWMLADKMAGLSLSDWAIIVGIAC TVITCGVNWYYRRKEREDRLNGIVSSTQK >gi|316920349|gb|ADCU01000001.1| GENE 801 884478 - 884972 299 164 aa, chain + ## HITS:1 COG:ybcS KEGG:ns NR:ns ## COG: ybcS COG3772 # Protein_GI_number: 16128538 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Escherichia coli K12 # 3 164 1 165 165 189 60.0 3e-48 MGLSPALRNKIASVIGGGAIAIATVMLSGNGGLEGREYVPYKDVVGIITVCDGHTGKDII LNKRYSDAECDALTKADLEQIAKQVNPSIKVKTTETQLAAIYSFSYNVGATAFIKSTMLK KLNAGDYSGACDELKRWVYAGGKKWKGLMNRRDVEYEVCTWSQR >gi|316920349|gb|ADCU01000001.1| GENE 802 884969 - 885334 151 121 aa, chain + ## HITS:1 COG:no KEGG:SPAB_02171 NR:ns ## KEGG: SPAB_02171 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 7 120 6 123 128 100 53.0 1e-20 MSKLTTVLLTLLVLLAVGIGVLWHNNGKLNEKVSDLDASQKSAEAITKNVLTTVTLFNQI SEANQNAKAQDALESQRAENDIKAAVANDDCANRLIPTDAVKRLREYADGIRSSSDNHAT F >gi|316920349|gb|ADCU01000001.1| GENE 803 885207 - 885545 147 112 aa, chain + ## HITS:1 COG:no KEGG:KPK_4147 NR:ns ## KEGG: KPK_4147 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 92 15 106 106 109 59.0 3e-23 MTSKLLLRMMIALIGLFLLMQLSGCGSTRTVYVQAPIITLPSNLTAETPKPKVPNSMSWS DSLLLNARLYSALEQCNIDKEDIRKAEEGRTLISLEGTCTAQGGTQFCTKTE >gi|316920349|gb|ADCU01000001.1| GENE 804 885867 - 886412 357 181 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_2292 NR:ns ## KEGG: NT01EI_2292 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 173 1 173 186 159 42.0 3e-38 MQYPSIVIENVPVRSNENGTYNLNDMHKAAVSGGLAKKWQVPSQFLGADGVQAFIDEVSK VLKDTLEQNHILDVVHGGAYRGTWAHELIALKYAAWLSASFEVKVYQTFRDVVMGKLSLF AQANKLELEYQSKNRRVSTAARIMNSWGVGGEKRRIESERIQLQEQIQLIIPGLPKDDKA A >gi|316920349|gb|ADCU01000001.1| GENE 805 886843 - 887037 254 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212711509|ref|ZP_03319637.1| ## NR: gi|212711509|ref|ZP_03319637.1| hypothetical protein PROVALCAL_02582 [Providencia alcalifaciens DSM 30120] # 4 60 3 59 62 77 68.0 2e-13 MADKYNVKATKKDGTTYEGVMTTKEPRLVNGLFAIAEHDGSWTYIQPDELSEITFKPVVE ETQE >gi|316920349|gb|ADCU01000001.1| GENE 806 887040 - 887471 282 143 aa, chain + ## HITS:1 COG:no KEGG:BAV1313 NR:ns ## KEGG: BAV1313 # Name: not_defined # Def: phage small subunit terminase # Organism: B.avium # Pathway: not_defined # 4 140 3 139 144 158 69.0 6e-38 MAGLTIKQEAFCQAYIETGNASEAYRKAYATENMKPETVNRKAKELYDIGKITARIKELQ GEIKQRHDVTVDSLLAELEEARQAALGAETPQSSAAVAATMGKAKLTGLDKQVIELTGQG GGPVRVVTMSPEEIKRVMENDDC >gi|316920349|gb|ADCU01000001.1| GENE 807 887458 - 888927 402 489 aa, chain + ## HITS:1 COG:XF1569 KEGG:ns NR:ns ## COG: XF1569 COG5410 # Protein_GI_number: 15838170 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 7 291 13 305 316 259 47.0 1e-68 MTTADDLIRARMCEADGLYFSRYFFKQRTGGKMIVAPHHKVIQETLDRVIDGEIKRLIIN VPPGYTKTELATINMMGRGLALNNRARFMHLSYSHNLALLNSSTTRNMIKSQAYQAMWPM SLRDDADSKAMWWTEHGGGVYASSAAGQVTGFRAGHMEDGWQGALIIDDPVKPDDAYSEV VRDGVNSRFNETIKSRLAVETTPMIVIMQRIHYHDLSGYLLRGGSGEMWHHLNLPVIIDN SQAYHEENTHGIPIQHGLPDGWLWPFKHNESHRVSLESHRRTFEAQYMQNPRRFNSDGAL WNEGMISAAHALNIHRELARTVVAIDPQATNSDESDETGIAVASSYGGGDERQYSVDADY SGKYSPNGWATKAMEAYKTHDADAIVIETNQGGDMAEDTLKNAGFKGRIIRVHASKGKYA RAEPISALYAQGRVAHRGSLYVMENQMMEYVPSTAKKSPDRLDALVWALTELSEPVVAGM MIPSRLRRR >gi|316920349|gb|ADCU01000001.1| GENE 808 888957 - 890312 570 451 aa, chain + ## HITS:1 COG:no KEGG:SeSA_A0634 NR:ns ## KEGG: SeSA_A0634 # Name: not_defined # Def: gp5 # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 426 22 446 471 624 71.0 1e-177 MNEKLKLAVNHALNEARNARARMGMLNPTMGLDAKRSSAWCEYGFKEDLTFDDLYKLYRR GGIAFGAVNKIISHCWKSNPQIIEGDKFDKAKKATAWEGKIKPVFTNRLWNSFAEADKRR LVSRWSGILLHIRDNKAWNQSVTKGKGLKKVTPVWAGALKPYSLDTDINSITYGLPTMWE YTEYLSNGGSRRVQIHPERVFILGDYSDDAIGFLEPSYNAFVSLEKVEGGSGESFLKNAA RQLNINFDKEINFNSLASMYGVSVEELQDTFNEVAVEINRGNDTTLTTQGAVVTPLVTSV ADPSPTYDVNLQTAAAGVDIPAKVLVGMQTGERASTEDQKYMNARCQSRRERELSYDIED FTDKLIELQIIDPVSEKTVIWDDLNEQSSSDKLDSATKMSEINQKAVSTGEPVFSRDEIR EAAGYESDENDPLGEEIDDGEESKVGDPTQQ >gi|316920349|gb|ADCU01000001.1| GENE 809 891185 - 892453 781 422 aa, chain + ## HITS:1 COG:no KEGG:ECL_01329 NR:ns ## KEGG: ECL_01329 # Name: not_defined # Def: gp7 # Organism: E.cloacae # Pathway: not_defined # 3 422 22 440 440 646 79.0 0 MTMQVNVTTKVNSQSIRRENYNGRDHLILPSYTLPANVVMNGGLYPESEIDAHYTGLEGT LAPLGHPMVNGQFVSAFSPEGLNIGYVGAWNRNVKKSGNRIYLEKWVDIGKAEESEGGRE LLERVAAIERGEDVPPIHTSVAVFLDQVEANEEQKALGADWVAKIKAMDHDAILLHEVGA ATPEQGVGLMVNADLATPIKANSGALVGESYRERENRLDRAVRDKFASGLDEYAWVADFT DSQVVVVRNGGKAEVFGYKSDGGKITFDETGSPVVRQESWVAVAVNKFKSFLNQQDRPAT NTNQTEGDMPLTKEELETIGNMIGEAVATNTEKAIKPLAEKVDALQANQKELSDSLTANA RAEEATKRAAVAKVHGDIVANALSGEALDSMFKNLGDAAPLAGNSANNPAETGAPAADQY FK >gi|316920349|gb|ADCU01000001.1| GENE 810 892466 - 892924 454 152 aa, chain + ## HITS:1 COG:no KEGG:SeSA_A0637 NR:ns ## KEGG: SeSA_A0637 # Name: not_defined # Def: gp8 # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 3 150 2 149 149 229 87.0 2e-59 MASRYRRVNIDGKSLYKTETRTTAAALLPGTAAIINSSGKFAQATALTGRLYIIDCAHHE GLGILDAVPSGDSAVGNYVEEGRELALLCVAGAYKKDSPIKLGSNGQFTLATADTDSVIG YSQDEATIAASSTDFIRVRMRVGTIAASGAGA >gi|316920349|gb|ADCU01000001.1| GENE 811 892938 - 894014 820 358 aa, chain + ## HITS:1 COG:no KEGG:ECL_01331 NR:ns ## KEGG: ECL_01331 # Name: not_defined # Def: gp9 # Organism: E.cloacae # Pathway: not_defined # 1 358 1 358 358 624 83.0 1e-177 MYFSKETLAANSRLGGHWNELWANRNIWNQQQKGMIAANRSVMTPEMLACNAVSGFAREF WAEIDNQILQMRDQEDGMEIINDLMGVQTILPVGKTAKLYNMVGEIADDVSVSIDGQAPF SFDHTEYNSDGDPIPVFTAGYGVNWRHAAGMNSVGIDLVLDSQQAKLRKVNKRRVAYYLS GDANIKVQGYPAQGMKNHRHTQKINLGSGSGGANIDLTSATQAQLIEFYGKGAFGSTARK NKVAQYDIQWVSPEIWANYAQPYVVNGVITGTVLQAILPFAPVKEVRPTFALSGNEFIAY QRRRDVISPLVGMAQGVVPLPRPLPNVNYNFQIMSAEGLQITADDQGLSGVVYGANLA >gi|316920349|gb|ADCU01000001.1| GENE 812 894024 - 894317 292 97 aa, chain + ## HITS:1 COG:no KEGG:ECL_01332 NR:ns ## KEGG: ECL_01332 # Name: not_defined # Def: GP10 # Organism: E.cloacae # Pathway: not_defined # 1 97 1 97 97 147 83.0 1e-34 MAKYEVIRPWFGVNVGDVVELDKLHPALKSNVRLMRGEAGGELTPATPEAGIGTKSRKEI IASRLTELGIEFKGNLGAEKLGELLPEGELDELFPTE >gi|316920349|gb|ADCU01000001.1| GENE 813 894380 - 894775 254 131 aa, chain + ## HITS:1 COG:no KEGG:ECL_01333 NR:ns ## KEGG: ECL_01333 # Name: not_defined # Def: GP11 # Organism: E.cloacae # Pathway: not_defined # 1 130 1 131 133 196 79.0 1e-49 MVTIEQAKEYLDSVGITLPDFILQALVDQANSIQDCLDSHYPASTALLIQLYLIGLMGLA QGDKYISSQTAPSGASRSFRYQSFADRWKGSLSLLTGLDKFGCTNGVLPPDPTVSAYAGI WIGKGGCMCGS >gi|316920349|gb|ADCU01000001.1| GENE 814 894778 - 894948 152 56 aa, chain + ## HITS:1 COG:no KEGG:ECL_03192 NR:ns ## KEGG: ECL_03192 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 56 1 56 56 68 67.0 6e-11 MTWFSVEERSPKPFARVWVRTDTGRETTGYVNSSGEWVINCKRIRDSGAKVERWRE >gi|316920349|gb|ADCU01000001.1| GENE 815 894945 - 895289 305 114 aa, chain + ## HITS:1 COG:no KEGG:Kvar_1804 NR:ns ## KEGG: Kvar_1804 # Name: not_defined # Def: hypothetical protein # Organism: K.variicola # Pathway: not_defined # 1 114 1 115 115 137 62.0 2e-31 MTATANWSYTAEATIWRSIGTDEWNKPSFAAPFTIACDYGGDSKRGNADVGREFVVKDTV WTEYAEAKEGDYLLIGVSTESNPIDAGADEIKHIIRYADTFDRVADDYALITGV >gi|316920349|gb|ADCU01000001.1| GENE 816 895291 - 895659 146 122 aa, chain + ## HITS:1 COG:no KEGG:XBJ1_1221 NR:ns ## KEGG: XBJ1_1221 # Name: not_defined # Def: putative GP14 # Organism: X.bovienii # Pathway: not_defined # 1 121 1 121 123 170 73.0 2e-41 MGVKVKGITKAKANMSRLIGDIQGRKAVRAIYKALYIGGAQASLYTPIDTSTLINSQFRD VNVSGKILTGRVGYSANYAVYVHDPSVKQNFRRSTARKEFLKLGFEESRSQIDKAIADEM KL >gi|316920349|gb|ADCU01000001.1| GENE 817 895731 - 896036 176 101 aa, chain + ## HITS:1 COG:no KEGG:XBJ1_1222 NR:ns ## KEGG: XBJ1_1222 # Name: not_defined # Def: hypothetical protein # Organism: X.bovienii # Pathway: not_defined # 1 101 24 124 124 142 63.0 4e-33 MVQWVEQKSDTGNMKYMVFQPDNGTSRVDDIGAEDYVLVIIVGAENDVQPLIQRAQDILD YASQHSDDSCLNAIFNDGGLPTPIPTEDNRMVIRLRFRCVS >gi|316920349|gb|ADCU01000001.1| GENE 818 896104 - 896856 575 250 aa, chain + ## HITS:1 COG:Z1894 KEGG:ns NR:ns ## COG: Z1894 COG5492 # Protein_GI_number: 15801361 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Escherichia coli O157:H7 EDL933 # 166 250 172 256 256 59 43.0 5e-09 MANCPNDNGKLMGRNIVVEVADGCPDVRPEEAEWKSLAACTSKTLDMAPNTTNSEADDTK GWVENLLTTADATISIDGEVGKNDKLDQYGIGRFTKYFVDEMNAMRQPTLWVRMQAGPIE FSAYMLITALTPADGGTNDIVTFSTEFKVANASTVKVDIINDVPLTGVSVAPETLSLTVG TNGTFTVNFTPTGATNKNFTVQSDDVAIATVSAAGPVVTVVPVAAGTANAIVITDDGQKV AVVDITVAAA >gi|316920349|gb|ADCU01000001.1| GENE 819 896912 - 897613 204 233 aa, chain + ## HITS:1 COG:no KEGG:ESA_03036 NR:ns ## KEGG: ESA_03036 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 2 223 3 225 229 199 47.0 8e-50 MTPLLEIGEMVLTDTEKGKDFFFRPSLLAMTRIGSPSEIVRTHVLLVGFDISNLLHRAQV AFGTVHPLVVNEAIRRGNTEVVYAAMNVMQACCEEDITPLIGELKGWKHCIVRRRGGLTD AEIVIIARELLAHGVIGKAKIRRLQRNESKSDYSPEFSAADYIVSAQSHFGLSRGDAEQL TMTMFQMMLKNKYPEEKGFTREEYNQIADSYLENKKRRIAMAEAEAKRKNAAA >gi|316920349|gb|ADCU01000001.1| GENE 820 897670 - 899907 1217 745 aa, chain + ## HITS:1 COG:RSc0873 KEGG:ns NR:ns ## COG: RSc0873 COG5281 # Protein_GI_number: 17545592 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Ralstonia solanacearum # 33 280 41 292 1366 116 32.0 1e-25 MASNQQVGNIVYQVQMDVAQLLDAQRKVNDRLDKMDGGFKKVGASADKLSTGMNKVGVAI AAAFTIQTAQKVIDIADSMAILQARINRLSVDAADGANNMQRLAAIASTTGSSIADTAKL WETLTASLKEYGATNDQVIRVTETLQKIGTIGGSSAEEMSNALRQFGQSIAGGTVRAEEF NSILENMPELGRQIAKGLGMSLGELRQEMLAGKLTAEDALNAIQKQTESVDAEFAKLPVS VERAKNKLDVAFDTATQKIDQAIGLTRTLSSLISSVADNLTLALNSYGELGNLEPLMKKQ VDLQKELNDLQKDGKQWYETQLTYQAKLNEKRRELLQVEGELVNIRAKQKKPAEAGQKSE TAPFSIPSGQTDKDVEKAAKAAAKAQKARETAAAKAQREADKEIETNKRRLAQYQAIEEK EEEAAKAAKERADSFSGSLSPTQNVENQFQQQLTELENYALVYPQKIEQIEAMRKQIEDK YRQERLAAQWEEFSQMNAGTQVLANALDSMGSTASNAITGILTGSMSASDAMRSLASTVL NSVVNSFVQMGIDWVKSAIMGQTATVGAVAASTAAQTAGIASTTAVSTAAAATTTAAWTP AAIVASIGSFGGAAAIGIGAVLGALAMGVAGARKNGGPVSAGSMYRVGEGGAPELLQSGG KNYMIPGDGGKVISNADLQTSGGGNIQVSVVFNDYTSGSHSYDAQTSQDGNSLTIQAFIL DMDQKGPMQQAITRNTTATSRATGG >gi|316920349|gb|ADCU01000001.1| GENE 821 899909 - 900406 201 165 aa, chain + ## HITS:1 COG:no KEGG:ECL_03185 NR:ns ## KEGG: ECL_03185 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 3 165 4 165 165 201 65.0 1e-50 MAIPYPDWLPLAQKSDKSPATDTGFRTDQPLVGAPIFQKLTDDLKTSFSLKWIFTFTQHR AFMQWLRSPNYLDNCNQWFFMRLNNGTGDTGLEVQELHFTAWPTWNQTGNIFTWSGSVIC RKLNNADDEFDDIIVELPPPWDSWLDIIVTGYPDDRDPESLPRVP >gi|316920349|gb|ADCU01000001.1| GENE 822 900406 - 900876 224 156 aa, chain + ## HITS:1 COG:no KEGG:ECL_01343 NR:ns ## KEGG: ECL_01343 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 154 1 154 156 180 53.0 2e-44 MPTLREYRAQRPNRIIYETIEFHHVSFGSFYLVNNQVFPKTLGGVEYKPCRFELSESQQS STPIIDSTIKFSRLAQDFKQQLKVWRSYSRIEPITVTYRLFDSKDMTTAIKEWQLYVKDC SLDADNVNVSLSMTNPLNTNVALLYDPADWPGLEIG >gi|316920349|gb|ADCU01000001.1| GENE 823 900880 - 901311 111 143 aa, chain + ## HITS:1 COG:no KEGG:ECL_03183 NR:ns ## KEGG: ECL_03183 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 128 1 128 130 178 62.0 4e-44 MTKSDFIKRMIGVPWANRACSMEACDCWGLVALYYRHVLGKEVHHKAGYESNRDFLTCYR EEVVFWQREKVPVEDGIFVGYMGRRAEHVGLVLNGMALHSRGLNGSVRLDKLRVMEKVFT KVEFYSYGTSRNPALARGAEGEN >gi|316920349|gb|ADCU01000001.1| GENE 824 901259 - 903724 971 821 aa, chain + ## HITS:1 COG:no KEGG:ECL_01345 NR:ns ## KEGG: ECL_01345 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 815 1 822 825 898 56.0 0 MALLEIQHLPGVPKERIELANGSNFYTWLEQQAFDRDIAIVINGVLADEETELSFKLTEL HRIQIFNQPRSIVSDILSPVFKLVTKVFSFLAPKPSFSTSADNNAKESPNNKLTGQTNIA RTYQARPDIYGQVRSFPDLIQQSMFEFTDNIKYVTEWMNFGIGQYTVESVRYSESSLGSI AGASYQFYPPGTVIPEIIQGFEFDDVDGQEVLGPNESNSEQVATATTNDVVSGTITGTSA AVKIVQSPDFDYFFDIPKPLPVQVTVNVTRHLASGDVTEDVTFSASLDSATESDDSAVID PVNYFTFQLSSINSPVEIPSGSTINNTIFTLTENKGNISGPYFSAIEGDELWVHLQAQLG KREGADFLLEYWAVNDNNDRISPTYSYSNYVFNASDSRADYIYGTFKFTPQYGKARYAFQ LRKTNNSSDSNLLQIAEAHSVTRRKNVTYPNDTLVKVTVRATEQATGSRDRKYNALVTRH TISYDINTRAVDYTLRPSRSFADAVAHEWLVIGKQPADTIDLYELYSIYQSLPDPRLGYF DYTFDDEDISLGNRVETICNAARVIAYWDDGVLTFARDERKEFPSAVFNRANIVADEYKI SYDMTMPGGYDGVEIEYVSPKTNKKTYIRYRITDTGIVEQAASSPMKISLSGCRNEYQAT DRALLEVNRLVSSRMKMNMKTLADGEYVSPGEMIVVADTYDTNQQAGYIVARNGNDFDTS EQINFAGDMYVRVTDSIGNSTDKIRAYPRTDTTFGFTAAVPNITLNIFDGYNVQSPSRYV IATTAEMEAMRWRVSDKKPNSDGTFSLTCDEYFDAKPDYNA >gi|316920349|gb|ADCU01000001.1| GENE 825 903780 - 906197 118 805 aa, chain + ## HITS:1 COG:no KEGG:ESA_03029 NR:ns ## KEGG: ESA_03029 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 1 142 1 142 663 191 66.0 1e-46 MATQPTNLPVPSESPRDLKFNAGKIDEFVTSLAQKYIDRFGGEHYTIEGIKQLAFEAMSS FGYVTLTSFEDGATLTTPNQALLWESNGEYYKWTGDLPKTVPVGSTPESTGGIGAGAWLS IGDSVLRSMLASAAGTDYVHTSGEKFTDVTVSKYLAWRNGDISAFGGKYDDVTAGALNKS AFAEMETTFGGVRLNLMGKSVYLPDDMNVEASNIIMWGAGTIHAGLGLGFILKENGYINC SYFHVEGFISSVSKTPRLFGVASGSTYKVNDISFSHFTTNGRVVLFSGLGGLSINPDEVN YGCNSIKITHFSSTNTYDHLIAIVDWPFNTLEISNFKVHNMAGTLCQASTNNENIYEQQL QKAMNTVSIHDYSIINDDNFWADGSNTYTSVGVFECWSLNHYNGYQSGVKIKVNGNVVYD IYNGARLVSERDITIVDCFAWNDSVLMPHKIKSAYQYTSQNKSWYYRRNYVSKMKTLFPT INESNSTGSFFYPETQDWHSNPIGALNFGNRFIHIDNCDIELINLGVTHGNAVLTNIRIT NNHFSSLSTLSTNFVIMVCYPYNICQQACISGNRFDTPSAVFNPLLTIIPGSSSGGGAFT GTIDISCNSGRFGGLRVISDYSAGTNYYASAMLSIKSNTFVSSTYCEVIYAGVLSPKYDF ITCIDNYLNGSTTCRIGQLWNCDGKVENSFTLVGGSNVAIFEVGIPTSMNVATNTYYLHI TGSNGEKVTNKFVISKSATTTSINFTDDSGSNVTKTTGVSNGSFLMKSTSTDGFDIGVIV SNTSIVIQAQSNVRSRYQVSGYSLQ >gi|316920349|gb|ADCU01000001.1| GENE 826 906237 - 906578 111 113 aa, chain - ## HITS:1 COG:no KEGG:ETAE_1945 NR:ns ## KEGG: ETAE_1945 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 4 107 389 492 502 74 33.0 8e-13 MAFFDISSLNPNDDSIIMISGTFKTAPMALKIVNKQRFLGRLLSQSEPWESRRIMKSFGI KNMDLGWGGDNINEIKEICTSGLNPIFDRYQYQIYRIDRKIFIWLKDTNTLCS >gi|316920349|gb|ADCU01000001.1| GENE 827 907402 - 907521 60 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEAIKTFLSNDDLNTAYVTVNATAIVENIKGRGAASDME >gi|316920349|gb|ADCU01000001.1| GENE 828 907724 - 908647 56 307 aa, chain - ## HITS:1 COG:STM0558 KEGG:ns NR:ns ## COG: STM0558 COG0463 # Protein_GI_number: 16763936 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Salmonella typhimurium LT2 # 1 305 1 308 308 468 73.0 1e-132 MKISLVVPVYNEEDTIHIFYEAVRNNPDLQGNDFEIIFVNDGSKDSTETIIKSIAIADPL VKAISFTRNFGKEAALFAGLESSTGDAVIPIDVDLQHPIEVIPKLIEKWNNGADVVLAKS TERYTDGFLKRKTTSWFYRFHNKISNPKIEENAGDFRLMSRETVNNIISLPEKNLFMKGV FAWVGGKVDIVEYTQANRSAGKSKFNGWRLWNLAIEGITSFSTVPLRIWTYIGLSVAAFS FAYGLWMIIDKLLFGNSVPGYPSLLVSILFLGGIQLIGIGVLGEYIGRIYIESKQRPRYI LKKNGDK >gi|316920349|gb|ADCU01000001.1| GENE 829 909229 - 909603 224 124 aa, chain + ## HITS:1 COG:STM2230 KEGG:ns NR:ns ## COG: STM2230 COG1974 # Protein_GI_number: 16765558 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Salmonella typhimurium LT2 # 1 124 39 166 167 102 39.0 2e-22 MAFPSPAADYVEKPISLDEQFVKNPASTYFMKCPDYCPSAGLLKDALIVIDSLKRPVHGS VVVAEVCGEFVLRRLLTMPVPCLAKLENYDDVTFTDEETGFEIFGVVTYVVNDMSMSEFH EIEV >gi|316920349|gb|ADCU01000001.1| GENE 830 909708 - 910235 258 175 aa, chain + ## HITS:1 COG:YPO2905 KEGG:ns NR:ns ## COG: YPO2905 COG3637 # Protein_GI_number: 16123096 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Yersinia pestis # 1 175 4 182 182 174 55.0 8e-44 MKKILLASLLFSALPVVAQAAGESTISGGYAQSHAKQDKAGLDEKPKGFNLKYRYEMNDN IGVIGSFTYTNQDYDFYNGNSKVGSGKFDYYSLAGGPSFRFNEYMSAYALIGASHGKAEV SATNQSESESKTTMMYGLGLQFNPLPNVAIDASYEYSKLEKVKVDTFIIGVGYRF >gi|316920349|gb|ADCU01000001.1| GENE 831 910770 - 911591 309 273 aa, chain - ## HITS:1 COG:ECs2777 KEGG:ns NR:ns ## COG: ECs2777 COG0859 # Protein_GI_number: 15832031 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli O157:H7 # 1 265 86 350 350 395 72.0 1e-110 MTMQDHASKDEIQEVAKNIKEQYGTPDICIEAMRKKNRKTMLFISKLRAKTNFQVVGLTM KCYSPICKTASRMDQELRAPVTMTWSTLMRDAGFPAVRPMFEFPLNEEVLIEVRNETRSL EDYIAINLEGSVQERTFSLPIAKKLISLIKNETDIPIVIVHGPKGVDNAVKLTESFEGVY HLSLSPSLMRSAAVIKDAFLAITPDTSILHMASAYNTPTIAVYADYKTRWPAMQDISETI VVGKDIDHINLDEFKKTLRNIVSRINNQISSKH >gi|316920349|gb|ADCU01000001.1| GENE 832 912373 - 912597 233 74 aa, chain - ## HITS:1 COG:no KEGG:Spro_1847 NR:ns ## KEGG: Spro_1847 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 74 1 74 74 99 74.0 4e-20 MSNVDFSTESTIETLANEVACLKATLTFMLKAMGQADAGKVIINMEKFAAQLEDASQSES FKHAICQIKHAYRQ >gi|316920349|gb|ADCU01000001.1| GENE 833 913206 - 913862 492 218 aa, chain + ## HITS:1 COG:YPO1865 KEGG:ns NR:ns ## COG: YPO1865 COG2197 # Protein_GI_number: 16122116 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Yersinia pestis # 1 218 1 218 218 374 86.0 1e-104 MISVLLVDDHELVRAGIRRILEDIKGIKVVGEAQCGEDAVKWCRSNSADIVLMDMNMPGI GGLEATRKILRYNPDVKVIMLTIHTENPLPAKVMQAGAFGYLSKGAAPQEVVNAIRAVHS GQRYIASDIAQQMALSQLTPQTDSPFASLSERELQIMLMLTKGSKVVEISEQLNLSPKTV NSYRYRMFSKLNISGDVELTHLAIRHGLCSAEKLSNSD >gi|316920349|gb|ADCU01000001.1| GENE 834 913855 - 915687 1132 610 aa, chain + ## HITS:1 COG:YPO1866 KEGG:ns NR:ns ## COG: YPO1866 COG0322 # Protein_GI_number: 16122117 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Yersinia pestis # 1 610 1 610 610 1066 85.0 0 MTERFEPVEFLKTVTHQPGVYRMYDATETVIYVGKAKDLKKRLSSYFRQNVGSRKTETLV KNIAQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPLIFLSADTHPRLSIHRG AKHAKGEYFGPFPNSYAVRETLALLQKLFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVK GLVSDEEYEQQVNYVRLFLSGKDNQVLESLVVRMEDASKALKFEEAARIRDQIQAVRRVT EKQFVSGNSDDLDVIGVAFDSGMACVHVLFIRQGKILGSRSYFPKVPSGTELSEVVQTFV GQFYLQGSQIRTLPGEILLDFTLPEKDILSDSISELAGRKVNIQTRPRGDRARYLKLAKT NAQTALSTKLSQQSTIHQRLTELEKVLHLSDIHRMECFDISHTMGEETVASCVVFDRNGP VRSEYRRYNINGITPGDDYAAMNQVLRRRYGKALEEDKIPDVIFIDGGKGQLGQAKEVFS ELDVPWDKHRPLLLGIAKGSDRKAGLETLFLQPEGEGFSLPPDSPALHLIQHIRDDSHNH AITGHRKKRAKVRNTSSLETIEGVGPKRRQTLLKYMGGLQPLMNASVEEIAKVPGISQAL AEKIHNALKH >gi|316920349|gb|ADCU01000001.1| GENE 835 915745 - 916293 239 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 9 175 486 665 904 96 35 2e-18 MRLNIPTLLTLFRVILIPFFVVAFYLPFVWAPLACALIFVFAAVTDWFDGFLARRWKQTT RFGAFLDPVADKVMVATALVLVTEHYHVWWITLPAATMIAREIIISALREWMAEIGKRSS VAVSWIGKVKTSAQMLSLVALLWRPDGYVIVAGVIALYIAAVLTFWSMFQYLNAARNDLL EP >gi|316920349|gb|ADCU01000001.1| GENE 836 917314 - 917679 60 121 aa, chain + ## HITS:1 COG:no KEGG:STM0905 NR:ns ## KEGG: STM0905 # Name: not_defined # Def: hypothetical protein # Organism: S.typhimurium # Pathway: not_defined # 2 120 11 132 132 124 50.0 1e-27 MVNKLLVVIALSLGALSANVMANTTKSSPRSPTDGVVCDVYFCANDKGVSAELTTRYLGK KKGKRLTAQGNFDHSAFTFSNGVFCDSTERLCRKDRYFGVDGKRSGKVDEHYTELLYGHK P >gi|316920349|gb|ADCU01000001.1| GENE 837 917828 - 918061 128 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MELLLNEAEYDLWGRATCFANDDLTDEADIADYVFNNLPKSYPCVGYLEAVQNPLHSFNI RFIYPQQITEWAQQFSM >gi|316920349|gb|ADCU01000001.1| GENE 838 918389 - 918652 68 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVKEADEGNKRLKADAIDAQRSAVRLREQLAQLRQQFADSETGKLSSAVSSSTSKFQTII LLTQLLSESNEVAREYAKEADRAYSAG >gi|316920349|gb|ADCU01000001.1| GENE 839 918693 - 919403 262 236 aa, chain - ## HITS:1 COG:no KEGG:sce1482 NR:ns ## KEGG: sce1482 # Name: not_defined # Def: hypothetical protein # Organism: S.cellulosum # Pathway: not_defined # 5 226 1 226 252 137 32.0 4e-31 MVYRMQKLSTLIDEKKDAFGNHPFFYYLKDSSVPLNERLSFLPYISHFVMTFSDINKYVL PFETPMNDLELAVNTHAKEDSNHWPWFINDLTETGNDKNMLLSDLLKKLWSEKLHRSRML SYSLIQLVVNQPAQLRLVAIEVMEATGNKTFEVLTAITADSDVKLKYCGSLHLSHESGHT IGSQDELIDTLVLTNEELKQANNIINSGFDSFTSFFDELLVNVSSHRYKTSFYINA >gi|316920349|gb|ADCU01000001.1| GENE 840 920405 - 920698 185 97 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAIDPSETAELICTAMEKLNRQKVITRFQMSLKGIGVLAQRDFVDHGYLMLLSTELITRG WCMFQVSHTSYSLIRHESASKFRKLSSDQLLSAIQGE >gi|316920349|gb|ADCU01000001.1| GENE 841 920703 - 921104 113 133 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKRYYSIIFSTRNIVESDIMKDFGNNVRFINMSVNSKGFAGNKGLTNNFFHTIKEFVWT FESKEQRDRALKRLNKIVNENVLYTMKVKTLMSPSRAAMCNSIRQPKMTDNLRKNWQQLV SRTAVIAHNNLVI >gi|316920349|gb|ADCU01000001.1| GENE 842 921321 - 922940 332 539 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3812 NR:ns ## KEGG: ECO103_3812 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 7 532 38 563 568 380 41.0 1e-104 MHISEHKKNIFCTLLSGAISPFPIIYDAVSEQVLLLILKARQLNRDPEFSPWFAEQHMVL TKLRGLSNKIENIYSTKNYTLDFKNEKPDSLMNALIFMNQLYAGFDKGNVSLKTWREMNR LPADQRFQFSQHNKLLEEFIQDDMFAILQHLNNCSPIPPEARKGYCHQDLSIAHSCSNDL LSRLNHFHEIDSLSILAEAIYDLITELHNYNIDIPAWLSKFKNVYTNFLLPNKRETPVFH DFIKLINDEGLNNFIERIVEQCEPHYADYLINQFKGIYASEIMQWLSNVQMYFQYAQSTP FTWKFNTVKYGISTVSEEEEQQPLLAWDSDYCQISIKRENLLQLIQSATLYDAADSLADC LMRIYRVPAEQMIRNKGIVPAVTDSECEVKSSDNWLFNTISQGNYQKKIDSLHSFEKWHV KNKTLLISRKNKRTERVNVEVRLAGLKSYDLYMGIPDGNRIKIKDGVYDLVKNDPSLRVE STLSNVSLQRYHSQVRKIIEKDIDNLLLQQQTYDSKYPYSSSYHSIKPLWGKSPKPGEK >gi|316920349|gb|ADCU01000001.1| GENE 843 923289 - 923732 346 147 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCDVTQQEVSDELERALLLKQTAEEYIDIAEGINNTVRDRLEEERDIGPDSNRWVSLDDI PFGEEALRVKSEQSNIDTSIQVLEDIADGKIPDADVVEKFQEVVEDLNNIEGTLQDVSAE EVIKASQAPNDDDFYHGHDEEFDEEED >gi|316920349|gb|ADCU01000001.1| GENE 844 924437 - 924970 393 177 aa, chain - ## HITS:1 COG:yodB KEGG:ns NR:ns ## COG: yodB COG3038 # Protein_GI_number: 16129920 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Escherichia coli K12 # 1 176 11 186 186 256 73.0 1e-68 MTKFSKLQIQLHWLTLVLLAVTYAAMELRGWFPKDSNAYLAMRATHYNVGVLVWLLMFLR LGLKQKYKDPRIVPQPPRWQMTAAKLMHIALYATFLALPILGIALMAYGGKSWDFFGFTI SPFVTPNSGVKATIKNLHETLANIGYFLIALHAAAALFHHYVQKDNTLLRMMPNKKI >gi|316920349|gb|ADCU01000001.1| GENE 845 925240 - 925578 143 112 aa, chain - ## HITS:1 COG:ECs4396 KEGG:ns NR:ns ## COG: ECs4396 COG2207 # Protein_GI_number: 15833650 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 6 108 141 242 274 91 41.0 3e-19 MRNTNPSLTFKVKEIITRDIGHNWSLESVANILCMSTSSLKKNLKTEGSTYRDIITQCRM QYAAKLLQTHNHLVTYQLASQCGYSHLSYFIHVFRKYYGVTPYQYSKKEIAA >gi|316920349|gb|ADCU01000001.1| GENE 846 926370 - 926828 -68 152 aa, chain - ## HITS:1 COG:no KEGG:Ctu_1p00120 NR:ns ## KEGG: Ctu_1p00120 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 3 152 138 287 287 131 42.0 8e-30 MRRFLANGGSIAPVTDFSSDELSKIYLKLMNIRWKDKYKDNCVKELADFIEAIRPMIFGS VLMFNDTPCAYDLVYKAECSDWIYFDDHNGGVDTNIKEFSPGSLLLSCNISDARTLCQTK SKECIFSLGRSNDKWSYKKLWAHEIKLGKSIF >gi|316920349|gb|ADCU01000001.1| GENE 847 928278 - 929567 801 429 aa, chain + ## HITS:1 COG:STM0399 KEGG:ns NR:ns ## COG: STM0399 COG1114 # Protein_GI_number: 16763779 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 429 5 437 439 362 49.0 1e-100 MKIREIITLGFMTFALFVGAGNIIFPPFIGLRAGENLWYAAAGFLITGVGLPVLALIAMA RKNGSLVELTKPAGKYFGLLLSLICYLALGPLFGTPRTATVSYEIGINPLFSGQVPLSIF SLVFFIAVIICSLNPLKLIDIVGKFLSPLKVVSLGLLGLYAFWRPAGNELSTFPEYVETP FSSGMINGYLTMDTLAALVFSIIIVNAIKSRGVDRAQNITRYMVITGLIAAVGLIYVYIS LFYLGAYSLPLARTATNGADVLHAYIVNGFGFKGSVFLAFVITIACLVTAIGLTSACASY FNQITGKSYKMFVVILAAVSMLLSNLGLTEIIRFSLPALTSVYPPFIVLVIYGALAKGAN NSVMLCMPATLVAFVVGIMQSVVPVDDIPLLVQHLPFYKEGMGWIVPTLVVFVLSAICRK VTPSQRVTS >gi|316920349|gb|ADCU01000001.1| GENE 848 929636 - 930757 688 373 aa, chain - ## HITS:1 COG:STM0382 KEGG:ns NR:ns ## COG: STM0382 COG0477 # Protein_GI_number: 16763762 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 373 22 395 403 453 69.0 1e-127 MSQILPFLPLYVEQLGVHNHESLSLWSGLVFSATFMVSALVAPLWGSLADRKGRKLMLLR ASLGMGMVIALQGMATNVWQLFALRALMGLTSGYIPNAMALVASQVPRDKSGWALGTLST GQICGVIAGPLLGGLMADHLGLRTVFFSTAAMMFVSFFVTLFLIKERRITVKKEDQLTGK EVFRTLPYPTIIIALFVTTLMIQLANASISPILTLFIRQLASDTSNIAFVSGMIAAVPGL AALESAPRLGGLGDRIGTGRILVAALGFTVVLFGLMAWVTSPLQLGILRFMLGFADGALM PAVQTLLLKYSSDRVTGRIFGYNQSFMYLGNVIGPMLGSSVSAVLGFRWVFIFTAALVLI NMLQIRHAFKKIR >gi|316920349|gb|ADCU01000001.1| GENE 849 931100 - 931669 535 189 aa, chain + ## HITS:1 COG:STM1902 KEGG:ns NR:ns ## COG: STM1902 COG1335 # Protein_GI_number: 16765244 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Salmonella typhimurium LT2 # 1 188 1 188 188 260 68.0 9e-70 MLTLNAAETALVLIDLQEGILPFAGGPHLAADVVARSARIAEHFRQHNAPVILVRVGWSA SFEEALKQPVDAPAPAHALPENWWDFPEALNVQPEDIEVIKHQWGAFYGTDLDLQLRRRG IRNIVLAGISTNIGVESTARNAWEHGYAVVIAEDACSAFDDIQHQHSFKYIFPRISRVSD SEKIIAALR >gi|316920349|gb|ADCU01000001.1| GENE 850 931745 - 932449 563 234 aa, chain + ## HITS:1 COG:XF2023 KEGG:ns NR:ns ## COG: XF2023 COG5587 # Protein_GI_number: 15838617 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Xylella fastidiosa 9a5c # 9 143 14 149 237 71 30.0 1e-12 MKETKFSGFTQQGLNFLQQVRVENSKEWFEEHRSVYNQHVLTPFRALVDELATPMLKIDP QFETRPAIGKTLSRIHRDTRFSHDKSRYRSQMWLTFKRHSKEWTDAPVFFFEISPDTLRY GLGYYSASKGTMDRFRHLALRQPEEFAAATACCKKPFELVGDMYKRPLVKEQDPAIANWY NRKTFAVMVTDHQVEQLFSSTLPEMLAKRFTQLAPLYQFLMKVEMLKQVPLEDL >gi|316920349|gb|ADCU01000001.1| GENE 851 932585 - 934192 1075 535 aa, chain - ## HITS:1 COG:STM0834 KEGG:ns NR:ns ## COG: STM0834 COG2194 # Protein_GI_number: 16764196 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Salmonella typhimurium LT2 # 15 527 13 526 526 594 56.0 1e-169 MNLTSNPFEPENKTRELLTPYTLLYFVLAALINLGLGYEFSVVYAIGLGCFFLLLGSYLP RVQKAVLFICILTAAFYYPFGRVFGPPNFNSILSLYSTNPEEAGEMMQIFPYWDYLIAVF IFILGIFILRRKTPQIRRWTMAKSLFLFSFVGALLLAPVTNLRAGGEFKLSDTGYPVVRF VEDVTNGKKEVDAEMARMKELSSVPDTWHVEDVKAKRQVYVLVIGESARRDAHGSFGGKW NNTPFESQVIGTFFNDYISAAPSTQKSLGQTLNLVRDGKPEYQNSIITLAKKAGFHTYWF SNQGQIGRYDTVVASVAKRADDVRFLKKGDFEDGKATSDFDLLRFTEDALQAQTDGPKLV VYHLIGSHPKACDRTGGRYDTFVHSKETSCYLYSITQTDSFLSQLYNQLKGSGQNFSMIY FSDHGLAFHEKGTSNEFLSHDDKYQQNYQVPLMILSSDDTRRRVIKARRSAEDFLHLFSE WTGIKSHELVAKYPFISNQKHPSPTVMNFALKQVAYSSLGNDPFTPKATKATMPK >gi|316920349|gb|ADCU01000001.1| GENE 852 934557 - 936329 1192 590 aa, chain - ## HITS:1 COG:ECs0088 KEGG:ns NR:ns ## COG: ECs0088 COG0768 # Protein_GI_number: 15829342 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Escherichia coli O157:H7 # 11 564 17 569 588 610 56.0 1e-174 MRKRSPLNPRGNYFQGRFVLICLGIVVFLALLLGRVGYLQLMNHPQLEREADQRSLRSLV TQPLRGTITDREGQPLAVSVASNDVIADPIHVLERDPNLTSEQWSYLSTALSQPESDIKA KILDNAHRHFIYLGRQVESGIAEYVNKLHIYGISTPSDSSRYYPMSDAASNLIGIVGLDQ QGLDGIESGFNNLLQGKPGHRVYRKDRYGNVVSLMEDDPAQQAPTLSLSIDRYLQYALYS HLREGVLLNKADSGAAVLVDVNTGEILGMASYPSYNPNNYQGVPQKDMRNVAISDSFEPG STVKPLVVMAGLARHLIRPDSVIDTTPYPVNGHLIKDVGHWSRLTITGILQKSSDIGVSH IALAMPSDVLVNLYHSFGLGVSTGLGIGGESSGYFPLHRERWSDIERATFSFGYGLRVTP LQMAREYATIGSFGIFRPVSITKVTPPVLGTRVMDENIVRTVVHMMESDALPGGSGVTAA VPGYRLAIKTGTAEKMGDSGKYDGGYVNYTAGVAPASDPRVALVVMVNHPNAGKHFGGSV AGPIFGQIMGDVLRHMNIPPDALTDQQSINLNNQMLSHNVQGINTQHKGA >gi|316920349|gb|ADCU01000001.1| GENE 853 936704 - 937204 371 166 aa, chain + ## HITS:1 COG:no KEGG:Spro_0994 NR:ns ## KEGG: Spro_0994 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 22 166 21 160 161 63 40.0 3e-09 MNQKLKPLSRVAIILTGIIGMATAHADLMGSLKSASEQLSSNTASTSGANSSSLLTGALG SLMGGNAQTLQSTSSANIGGVLSYCVQNNVLAAGNQKVESVKDALLNKLGTQTESQSYQN GLNGILDLQGKDDVNLNNLGSMTSDMKAKIKTKVCGMVLDQAKKIV >gi|316920349|gb|ADCU01000001.1| GENE 854 937258 - 938163 469 301 aa, chain - ## HITS:1 COG:mlr0240 KEGG:ns NR:ns ## COG: mlr0240 COG0657 # Protein_GI_number: 13470513 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Mesorhizobium loti # 45 300 51 303 316 169 38.0 5e-42 MRSLKSHLFKFVIKRHFAQADLSDVATVRKQMDELGERMPLANGVHLSSVELSGIYAEWL TPENACADAVILYLHGGAYHMGSCSSHRSMASFIADAAKIPLLLIDYRLAPESPYPAALD DAETVYRWLCVQPNINTKRIFLMGDSAGGGLALALALRIKSISTLPRPAAIAVLSPWVDL TMSGESVKTRLKRDPFFAPHIQQASHCVNAYCGSTPLTNPDVSPLFGQLEGLPPLLSQVG SEEILFSDAQRLAEKAQKSGSEVLFSYWQGMWHVWQYLVPRMKESRMAIAEVGNFCRRYL K >gi|316920349|gb|ADCU01000001.1| GENE 855 938208 - 938480 247 90 aa, chain - ## HITS:1 COG:yjdJ KEGG:ns NR:ns ## COG: yjdJ COG2388 # Protein_GI_number: 16131953 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli K12 # 1 90 1 90 90 140 78.0 5e-34 MEILEGDNNFYINDAQGNLIAEVVFVLTGEHLAIIDHTDVDETLKGQGVGKRLVAKVVEK MRRENRKIIPLCPFAKHEFDTTPEYQDVRA >gi|316920349|gb|ADCU01000001.1| GENE 856 938491 - 938721 219 76 aa, chain - ## HITS:1 COG:ECs5108 KEGG:ns NR:ns ## COG: ECs5108 COG3592 # Protein_GI_number: 15834362 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 76 1 76 76 124 73.0 6e-29 MDQELLDAGYRQYHGKDIDVYFNLSICQHSGNCVRGNSHLFKLDRQPWIMPDSVDVNTVM SVINTCPSGALKYHQK >gi|316920349|gb|ADCU01000001.1| GENE 857 938864 - 939295 294 143 aa, chain - ## HITS:1 COG:STM1927 KEGG:ns NR:ns ## COG: STM1927 COG0589 # Protein_GI_number: 16765269 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Salmonella typhimurium LT2 # 5 143 1 139 142 125 43.0 2e-29 MGAEMSYRRVLVAVAQAPDSIKLVEKAIAIVRPYQGSITLLTLCNEADLTASFAGSMLGS LRELIHEEANLFLEELRQQADYPISRTIVCNGELADGVIYACKEDPVDLVICGNHCEGFL KRILNSATHIIDKTHTDVLIVPL >gi|316920349|gb|ADCU01000001.1| GENE 858 939604 - 939762 61 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLFWFYLSVETVYTVTDFTLFTFVQHLSQGKLKIYKMMFRFNGLNNPKIHH >gi|316920349|gb|ADCU01000001.1| GENE 859 940360 - 940710 264 116 aa, chain + ## HITS:1 COG:no KEGG:Spro_2989 NR:ns ## KEGG: Spro_2989 # Name: not_defined # Def: transcriptional activator FlhD # Organism: S.proteamaculans # Pathway: Two-component system [PATH:spe02020]; Flagellar assembly [PATH:spe02040] # 1 115 1 115 116 162 79.0 2e-39 MSTSEILKHIYDINLSYLLLAQRLIHEEKASAMFRLGINNEMADSLALLTLPQMVKLAET NQLVCQFRFSDHETIQKLTQESRVDDLQQIHTGIMLSSHLLKQLSPTDTCPPHKRV >gi|316920349|gb|ADCU01000001.1| GENE 860 940713 - 941294 400 193 aa, chain + ## HITS:1 COG:no KEGG:ETAE_1337 NR:ns ## KEGG: ETAE_1337 # Name: flhC # Def: transcriptional activator # Organism: E.tarda # Pathway: Two-component system [PATH:etr02020]; Flagellar assembly [PATH:etr02040] # 1 193 1 193 193 341 87.0 6e-93 MSEKSIIQEARDIQLAMELISLGARLQMLESETQLSRGRLIRLYKELRGSPPPKGMLPFS TDWFMTWEQNIHSSMFYNVYAFMIKSQSCRGVEAVIRAYKLYLEQCPVPPGEQPVLALTR AWTLVRFVDSGMLESAPCSCCGGSFIAHAHQPLSSFVCSLCQPPSRAIKKRKLSDNLADM FPQLLNEQEKRVV >gi|316920349|gb|ADCU01000001.1| GENE 861 941479 - 942372 752 297 aa, chain + ## HITS:1 COG:YPO1664 KEGG:ns NR:ns ## COG: YPO1664 COG1291 # Protein_GI_number: 16121928 # Func_class: N Cell motility # Function: Flagellar motor component # Organism: Yersinia pestis # 1 296 1 294 295 460 83.0 1e-129 MLILLGYAVVTIAVLGGYVIVGGHLGALYQPAELLIIAGAGIGAFIVGNNGKAIKATLRT LPKLGRSAKYNKALYMDVMGLMYLLLAKARQQGMLTLERDIENPQESELFSNYPRILADK ILIEFITDYMRLMVSGNMNAFEIEALMDEEIETFESEAEGPADSLAMVGDSLPAFGIVAA VMGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFVSPLASLMRQNCAETVKMMQC IKTTLLSSLHGYAPQIAVEFGRKTLYSTERPSFMELEEHVRQVKSPAAQQSAVEEEV >gi|316920349|gb|ADCU01000001.1| GENE 862 942369 - 943358 666 329 aa, chain + ## HITS:1 COG:YPO1665 KEGG:ns NR:ns ## COG: YPO1665 COG1360 # Protein_GI_number: 16121929 # Func_class: N Cell motility # Function: Flagellar motor protein # Organism: Yersinia pestis # 1 313 1 316 427 417 71.0 1e-116 MKNGNRPIILVKKRKPSKKGGHHGGSWKIAYADFMTAMMAFFLVMWLLAIASPQELTKIA EYFRTPLAVALTHGDRSSASTSPIPGGGDDMMQKEGEVAKSMPDPATKADSERLKKLRKQ IDQLILTDPRLKALQPHLLINMMDEGLRIQIIDSQNRPMFENGSARVEPYMRDILRAIAP ILNDVPNKISLSGHTDDLPYASGERGYSNWELSADRANASRRELIAGGLAEGKILRVVGM ADTMSLKSQTSDAAINRRISILVLNKSAQHNIEHENSESQEMDFSNPAAMKQWSEGGAVN LAPQASPVQTSPLAPMNDHIITTTPTEKR >gi|316920349|gb|ADCU01000001.1| GENE 863 943368 - 945416 1939 682 aa, chain + ## HITS:1 COG:STM1921 KEGG:ns NR:ns ## COG: STM1921 COG0643 # Protein_GI_number: 16765263 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein histidine kinase and related kinases # Organism: Salmonella typhimurium LT2 # 1 682 3 671 671 908 73.0 0 MDITAFYQTFFDEADELLADMEQHLLELDPEEPDIEQLNAIFRAAHSIKGGAGTFGFNIL QETTHLLENLLDGARRHEMRLSTDIINLFLETKDIMQDQLDAYKSAQDPDHASFEYICQA LRQLALEAQDVSGSATAENPHLKAVTEENADADQNTNNDGAQASTLPDGCISLSLCGLKP QEVALMLEELGNLGTVREHTETAHGLDAVLETTASEDDIAAVLCFVLEPEQIAFNHTLPE KAENTVSQPAAPTAEAQPKTATTPELKLVQEPATPRTEAPKRTAKATESTSIRVAVEKVD QLINLVGELVITQSMLAQRSDMLDPVDHGDLLNSLGQLERNARDLQESVMSIRMMPMEYV FSRFPRQVRDLAGKLNKQVEITLLGSSTELDKSLIERIIDPLTHLVRNSLDHGIETPEVR VAAGKSPVGNLTLSAEHQGGNIYIEVIDDGAGLNRERILAKARSQGMAVSDTMTDDEVGL LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVEIQSRSGKGTTIRIVLPLTLAIL DGMSVKVNNEVFILPLNAVMESLQPREEDLYPLAGGERVLQVRGEYLPLVELYSVFDVEG AKTDAMQGIVVILQSAGRRYALLVDQLIGQHQVVVKNLETNYRKVPGISAATILGDGSVA LIVDVAALQSINREKRSAVSAA >gi|316920349|gb|ADCU01000001.1| GENE 864 945497 - 945991 583 164 aa, chain + ## HITS:1 COG:YPO1667 KEGG:ns NR:ns ## COG: YPO1667 COG0835 # Protein_GI_number: 16121931 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis signal transduction protein # Organism: Yersinia pestis # 1 163 1 163 165 263 90.0 1e-70 MTGLASVTKLAGETVGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTN LRGVIVPIIDLRVKFSQENVTYNDNTVVIVLNFSQRVVGIVVDGVSDVLSLTNEQIRPAP EFAVTLSTEYLTGLGSLGERMLILVDIEKLLSSEEMELVEGMTA >gi|316920349|gb|ADCU01000001.1| GENE 865 947008 - 948675 1635 555 aa, chain + ## HITS:1 COG:ECs5315 KEGG:ns NR:ns ## COG: ECs5315 COG0840 # Protein_GI_number: 15834569 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli O157:H7 # 1 555 1 554 554 737 79.0 0 MLNRIKVVTSLLLVLGLFGILQMTSGGLFFNALKNDKENFTVLQTIRQQQSTLNGSWVAL LQTRNTLNRAGIRYMMDVNKTGSGATVDDLLQIAKTSLQQAEGRWGEYEALPIDPRQSQE SVEQLKRNYDILHGALSELIQLLSTGKINEFFDQPTQGYQDGFEKSYVDYLVQNDRLYQE AVNDNNSSYSMAMWILIGVLALVAVAIVLVWFGIQRTLIVPLNRLIDSIKHIAGGDLARS IDVHGTNEMGQLAASLKHMQGELVRTVGNVRQGANAIYSGASEISAGNNDLSSRTEQQAA SLEETAASMEQLTATVKQNAENARQASHLALSASETAQKGGKVVANVVQTMHDIAGSSQK IADITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGL IEDSVNRVDMGSVLVESAGETMGDIVSAVTRVTDIMGEIASASDEQSRGIDQVGQAVSEM DRVTQQNAALVEESASAAAALEEQASMLTQAVSVFRIQHDFKEDISESRSVKPVIATPAP RAIAATDAGDNWETF >gi|316920349|gb|ADCU01000001.1| GENE 866 948937 - 950568 1409 543 aa, chain + ## HITS:1 COG:ECs2595 KEGG:ns NR:ns ## COG: ECs2595 COG0840 # Protein_GI_number: 15831849 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli O157:H7 # 1 520 1 520 533 455 55.0 1e-128 MFNRIRVSTSLFLLLMLFCLLQLGSTGLSFMSIRSDNNNFSNVQVVNEQREALNQSWVAL LQARNTLNRAGTRAALKVPQEKVNELMAGARSSLQKADLYFNQFLAVPRVTREGVELTET TKQSYEKLRTTLRELIVLLEQGDLQGFMDQPTQKIQDLFEVQTQAYTQHVDAVLAKTATE NKNAYTLSMLMVAGAIVMLIVVVLSSLYWLRKMLISPLNTMRDHFDRIAEGDLSGEIKVF GRNELSLLFASLQQMQQSLAKTVLTVRQGSDAIYNGLQEIASGNNDLSSRTEQQAASLEE TAASMEQLTATVKQNADNARQAARLAKEASGTATSGGEIVGNVVRTMHEIASSSQKIGDI TSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLIDDS VNRVKQGSALVENAGNTMEEVVRSVARVTDIMGEISSASDEQSRGIEQVALAVTQMDQVT QQNAALVEEAASATQAVEEQANALTRSVAAFHLVSAPAARVVDDRIATSTQKLPKDKDVW QPI >gi|316920349|gb|ADCU01000001.1| GENE 867 950636 - 951511 461 291 aa, chain + ## HITS:1 COG:YPO1678 KEGG:ns NR:ns ## COG: YPO1678 COG1352 # Protein_GI_number: 16121940 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methylase of chemotaxis methyl-accepting proteins # Organism: Yersinia pestis # 19 289 19 289 290 406 75.0 1e-113 MANLFTQSGNDDVQTPALMMQRVPLADVHFRRISQLIYQHAGIVLADHKREMVYNRLVRR LRALNLNDFGAYLALLESSQSHGEWQTFINSLTTNLTAFFREAHHFPILAEHARKRPHNY CVWSTAASSGEEPYSIAMTLAEALGTTPVGPQVWASDIDTQVLEKAVRGVYRQEETKHLT PSQLQRFFLRGTGPQQGFVRVRPELAQRVHFQMLNLLSPQWDLPGPFDAIFCRNVMIYFD KETQARILHRFIKLLKPGGLLFAGHSENFSHISQEFYLRGQTVYGLSKESR >gi|316920349|gb|ADCU01000001.1| GENE 868 951508 - 952338 650 276 aa, chain + ## HITS:1 COG:YPO1679 KEGG:ns NR:ns ## COG: YPO1679 COG2201 # Protein_GI_number: 16121941 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain # Organism: Yersinia pestis # 1 260 1 259 349 449 91.0 1e-126 MSKIRVLCVDDSALMRQLMTEIINSHPDMEMVAVAQDPLVARDLIKKFNPQVLTLDVEMP RMDGIDFLEKLMRLRPMPVVMVSSLTGKGSEITLKALELGAVDFVTKPQLGIREGMLAYS EMIADKVRAAAKARLPARGSLPVKPATLSHTPLLSSEKLIAIGASTGGTEAIRHVLQPLP TTSPALLITQHMPPGFTRSFAERLNKLCQITVKEAEEGERVLPGHAYIAPGDMHLELARS GANYIVRLHQGPAVNRHRPSSMCCLIRWHAMQGEMR >gi|316920349|gb|ADCU01000001.1| GENE 869 952356 - 952559 244 67 aa, chain + ## HITS:1 COG:YPO1679 KEGG:ns NR:ns ## COG: YPO1679 COG2201 # Protein_GI_number: 16121941 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain # Organism: Yersinia pestis # 1 67 283 349 349 111 82.0 3e-25 MGNDGAAGMLKMHQAGAYTIAQNEASCVVFGMPREAILTGGVDEVVDLQQISQRMLTQIS AGQALRI >gi|316920349|gb|ADCU01000001.1| GENE 870 952594 - 952983 468 129 aa, chain + ## HITS:1 COG:YPO1680 KEGG:ns NR:ns ## COG: YPO1680 COG0784 # Protein_GI_number: 16121942 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Yersinia pestis # 1 129 1 129 129 216 89.0 7e-57 MADKNLRFLVVDDFATMRRIVRNLLKELGFNNVEEAEDGADALTKLRAGAFDFVVSDWNM PNMDGLQLLQAIRADGSLGALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKL NKIFEKLGI >gi|316920349|gb|ADCU01000001.1| GENE 871 952993 - 953637 768 214 aa, chain + ## HITS:1 COG:YPO1681 KEGG:ns NR:ns ## COG: YPO1681 COG3143 # Protein_GI_number: 16121943 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein # Organism: Yersinia pestis # 1 214 1 214 214 307 80.0 8e-84 MNEHPMPATDAATANDIIARIGQLTRMLRDSLKELGLDQAIAQAAEAIPDARDRLDYVVQ MTAQAAERALNCVEAAQPRQTSLEKGATDLKVRWDEWFANPIELSDARVLVSDTRSYLAA VPEHTSFTHAQLLEIMMAQDFQDLTGQVIKRMMGVVQEIEKELLAVLVENIPDVSAKPKR ENDGLLNGPQMNQNGPGIVANQEQVDDLLGSLGF >gi|316920349|gb|ADCU01000001.1| GENE 872 953745 - 954179 432 144 aa, chain - ## HITS:1 COG:ECs5154 KEGG:ns NR:ns ## COG: ECs5154 COG1959 # Protein_GI_number: 15834408 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 139 1 138 141 144 50.0 4e-35 MKLTTYTDFGLRALMYLASMPYGQRTSVGEIAGHYDISRNHMVKVVAQLVGLGYIHAVRG KGGGIELGKPAADINIGQVIRALESNLNGIDCHSPGCKLIKICQLQAALKVGMEAFLTAM ENYTLADLVSNRGEIIAILGIPAE >gi|316920349|gb|ADCU01000001.1| GENE 873 954178 - 954381 67 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSLVSENINSVYNIIMALLAELMAINSKVKSFLTISGNNINTVIILSLSSSKFSLGDSS IHTNAGY >gi|316920349|gb|ADCU01000001.1| GENE 874 954703 - 955491 772 262 aa, chain + ## HITS:1 COG:ECs1266 KEGG:ns NR:ns ## COG: ECs1266 COG1702 # Protein_GI_number: 15830520 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Escherichia coli O157:H7 # 1 261 93 353 354 445 84.0 1e-125 MGKQKAVIRARREAKRVVKRDGRSQRQREEDQAASLVQMGGIETIGMAREKRDNAPVTAR TEAQVAYLSAIESKQLIFATGEAGCGKTFISAAKAAEALIHKEVDRIIVTRPVLQADEDL GFLPGDVSEKFAPYFRPVYDVLVRRLGASFLQYCLRPEIGKVEIAPFAYMRGRTFENAFV ILDEAQNVTASQMKMFLTRLGENVTVVVNGDITQCDLPRGVKSGLEDALQRFTEDGMVSI VRFDSQDCVRSALCQRTLNAYQ >gi|316920349|gb|ADCU01000001.1| GENE 875 955647 - 956489 718 280 aa, chain + ## HITS:1 COG:mll3062 KEGG:ns NR:ns ## COG: mll3062 COG0697 # Protein_GI_number: 13472689 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Mesorhizobium loti # 19 280 19 281 281 172 44.0 7e-43 MSTAVFLAVLCAALLHASWNTLVKIGEERFVGVALIAVFSGAVSLCGLAWVGLPNMASLP WLLLSLVLHTGYCLFLSRAYGQGDLGQIYPLARGSAPLLAMILSALFLREYPPLLGIIGA VVLVAGVLLMALRGGGSTKLNAKAVRYALITAMFTAGYTLSDGAGARAAQAPLTYTLWLF TLNGVIMLPLLWTHQRGKTWVQIKCNWRAGLAGGAMSLLAYGIVIWALTQAPIGVVAALR ESSVLFAMIFSVWLLKEPMGRARIAASLVIVTGVMLSRLG >gi|316920349|gb|ADCU01000001.1| GENE 876 956554 - 957663 1037 369 aa, chain - ## HITS:1 COG:STM1771 KEGG:ns NR:ns ## COG: STM1771 COG0387 # Protein_GI_number: 16765112 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 10 368 8 365 366 507 82.0 1e-143 MKSETEAYRVKTRHSEYSLALPVIALVVLALWGNTQNLPAIAGINILALIAILSSAFSVV RHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPALMRDTLYSIVMIVTGGL VGFSLLLGGRKFATQFVNLAGIKQYLITLIPLAIIVLVLPMTFPNGNFTTGQALMIAAIS AAMYGVFLLIQTKTHQSLFVYEHEDDGDDPADPHHGKPSAHSSAWHAGWLIVHLIAVIAV TKFNANPLESLLSTLDAPKQFTGFLVALLILSPEGLGALKAVLANQVQRAMNLFFGSVLA TISLTVPAVTIIATLTGQPLIFALDAPQMVVMVAALMLCQVSFSTGRTNVLNGAAHLALF AAYLMTIFL >gi|316920349|gb|ADCU01000001.1| GENE 877 958020 - 958595 542 191 aa, chain + ## HITS:1 COG:yohD KEGG:ns NR:ns ## COG: yohD COG0586 # Protein_GI_number: 16130074 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli K12 # 3 150 14 161 204 143 45.0 2e-34 MTDAGQWISDYGYIAVVVGSIIEGETIAFLAGIAAHKHLLSYPLVLLLTFVGATAGDFTL YMVGRRFGTQILSRFRRQQKKIQRFQQRVREHETWLILGMRFAYGFRTVGPIIIGSSGVK LRKFVLFNVIGAAVWAFSVVTLGYAASEVLFRLFAHEHQRRIAFVVLMVALLLILIGVKW YRSKQADSNDA >gi|316920349|gb|ADCU01000001.1| GENE 878 958552 - 958953 176 133 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_3056 NR:ns ## KEGG: ECUMN_3056 # Name: ygbA # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 113 1 113 114 174 79.0 1e-42 MPDNRIQREKLTIRRMISLYQRRCPEATADEQHYDLLYAYAVKRLDRCIFGTDKPACKQC PVHCYQPSKREEMKQIMRWSGPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKNSRTFQP KHRYCPPVLTDTI >gi|316920349|gb|ADCU01000001.1| GENE 879 959054 - 959572 485 172 aa, chain - ## HITS:1 COG:PA4011_1 KEGG:ns NR:ns ## COG: PA4011_1 COG0586 # Protein_GI_number: 15599206 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Pseudomonas aeruginosa # 4 169 3 170 275 58 29.0 6e-09 MAWLEPLLAHFALYPAHLFLLLFGIALSKSTVVLSSLLPPASVMLLASISISQPSLTVGE VWLAITLGAALGSILSFHFGALIMRNKLSTGLLTRHEEKLQNIRRKLENNGVLVLFGSRF IAVLRYMVPLAAGMLPLKRFRVYCVSLFSAAIWAALFVGITSGALLIIPPMI >gi|316920349|gb|ADCU01000001.1| GENE 880 959773 - 961239 1087 488 aa, chain - ## HITS:1 COG:PA1282 KEGG:ns NR:ns ## COG: PA1282 COG0477 # Protein_GI_number: 15596479 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 1 486 1 485 501 425 57.0 1e-119 MNANQRWLTLAIVSSALFLIVVDMTVLYTALPKLTLSLNANASEKLWIINAYPLVVAGLL PAAGMLSDRIGHKKLFMYGLPVFALASLCAAFSPNAPLLIGSRVFLAVGAAMMMPPTLSI IRHTFTEPKERSLAIGIWSAVASGGAAIGPVIGGMLLEYFWWGAVFLINVPVVLIVLPFA KWLIPTDRQTKQRPCDYLGSVQVLIGLVAAIYALKELSKTQPSLLLMLISAALGIAFLTI FVRRQRRLDTPMIDFSLFSNRMFTSGVAIALVAMLAMVGIELVLSQRLQLVVGLSPLEAA LYILPIPLAAALAGPLAGVLQPKYGERNLVMGGLTITALGIVGLALRYNESLLEILIYLA AIGCGIGASFTAASTAIMFNAPNEKAGMAASIEDVAYELGSVLGITLLGGMMTAVYSSSL VLPAQISLDSAAFDSIDETLKLAKTLNVEQAQWIISQAHSAFDNAFVYVLVSAAILLAVS AIMLKRIR >gi|316920349|gb|ADCU01000001.1| GENE 881 961363 - 961920 533 185 aa, chain + ## HITS:1 COG:PA1283 KEGG:ns NR:ns ## COG: PA1283 COG1309 # Protein_GI_number: 15596480 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 181 1 181 186 219 59.0 3e-57 MGRQRSIDREKVLDVAEEIISTQGAAALTIDSVARAMGISKGGVQYCFGNKDALIDAMFE RWGKAYDQVFDLVARQDDSPENRVAAHVMATHKYDQASSAKAAGLLVTLMQTKEHLENTR HWYRDRIAKLDITTPAGKQARIAFLATEGAFMLRYFGLMDIEQNEWESIFSDIESLISSE AKNRV >gi|316920349|gb|ADCU01000001.1| GENE 882 962420 - 963433 851 337 aa, chain + ## HITS:1 COG:VC1655 KEGG:ns NR:ns ## COG: VC1655 COG2239 # Protein_GI_number: 15641660 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Vibrio cholerae # 16 334 129 447 451 291 50.0 9e-79 MSYRVKNAIHNHNKEYDDDAIAQYMRTDVITLEHILCVQEAREIFLSRLKDDDIPAQVFV VNGDKFCGVLSIKKLLQESDPMQTIRALMDVNFYHVSPKDERQDVILLLSKEELDIVPVI DNGKLVGGLTEKEIAHLLEDDVTEDAQRQGASLPLEKPYLETSPITLWKKRSVWLLLLFV AEAYTSSVIQHFEDALESAIALAFFIPLLIGTGGNSGTQITSTLVRSMALGEVHLRDLGK VIRKEVTTSLMIALTLGLAGCLRAWMMGIGPEITLIVSLTLVCITLWSAVVSSVIPMVLK RVGIDPAVVSAPFIATFIDGTGLIIYFKIAQYSLGLN >gi|316920349|gb|ADCU01000001.1| GENE 883 963625 - 964260 414 211 aa, chain - ## HITS:1 COG:PA0243 KEGG:ns NR:ns ## COG: PA0243 COG1309 # Protein_GI_number: 15595440 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 2 208 14 220 222 179 43.0 3e-45 MPTDSKRKNDPEGLKKKILSGALTVFAEFGMQGARLEQIASEAATTKRMVVYHFQNKEQL YIAVLEKVYEQIRQYELGLNLSKLPPKEALITLVEKSFDYHISHADFMRLVCCENLLRGR YISQSSQIQSANQTALEVLENILSRGKSNGDFYTDLNVIDVHRLISSICVHQVSNRYTFN ALFHSQQSNEEILARNRQLAVTAVVRYVCVK >gi|316920349|gb|ADCU01000001.1| GENE 884 964311 - 964706 83 131 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRSTNESIKMTSLLLKKCHSPGITGCGGRTACARQGIPPDIIFAFTFSAVLASKTASERM KCLLFTFYLQIKINQYGNHYVTVFLQQGHYVPNGTFLMRTLSAYFLEFEKRGEFTKKKCN SSSGICIALNR >gi|316920349|gb|ADCU01000001.1| GENE 885 964510 - 965223 675 237 aa, chain + ## HITS:1 COG:no KEGG:Mpop_4203 NR:ns ## KEGG: Mpop_4203 # Name: not_defined # Def: hypothetical protein # Organism: M.populi # Pathway: Pentose phosphate pathway [PATH:mpo00030]; Metabolic pathways [PATH:mpo01100] # 1 231 1 232 236 208 47.0 1e-52 MKRRHFILSLAVLLASTALKVKAKIISGGMPWRAHAVRPPQPVIPGEWHFFNNNEVILMD SLVDLIIPPDELSIGAKEAGCTLFIDRQLSGDFGKATTVYRLGPVVEGLPQQGPQFKDTP AERYRLGLSAIGNVAKKQYQKEFHQLEEEQQIEMLQSIENGTLALPGLNGQAFFAMLIQN VREGFFADPLYGGNKDMAGWKMLGFPGARYDYREEIKLRGKGLNLVPISMISTQKDA >gi|316920349|gb|ADCU01000001.1| GENE 886 965261 - 967033 1185 590 aa, chain + ## HITS:1 COG:PA2265 KEGG:ns NR:ns ## COG: PA2265 COG2303 # Protein_GI_number: 15597461 # Func_class: E Amino acid transport and metabolism # Function: Choline dehydrogenase and related flavoproteins # Organism: Pseudomonas aeruginosa # 1 590 1 591 591 554 47.0 1e-157 MSNKREKADVVIVGLGWAGSLMANELTMAGLNVVAIERGSWRDTSTDFPTTIDTDELRFV SRRAIMQPPAVETLTFRNTPVQRALPLREWNTYQFGWNVGGAGTHWNGMTWRFLPYDFQS YSMTVERYGKDKLLPGLQVQDWGISYQDLEPFYDKFERYAGTSGKAGNIQGKIQIGGNPF EGPRQRDYPLPPLERTRMAEIFDQAAKGLGYHPFPVPAGNTSGAYTNPLGIKMAPCTYCG YCEFFGCGNWSKSSPQACILPALMQRKNFQVITESEVLHVNLSSDKKTATGVTYIDNEGK QWEQPADIVIIAAYQMDNVRLMLLSGIGKPYNHQTGEGVVGRNYAYQTISGASVFFKNEH LNPFIGAGALAQAIDDFNGDNFDHSQHDFIGGAVALVHSTNGRPIASGNLVPPGTPKWGR EWKQAYQQSYQNANSVYCQGNSYPHRDVFLDLDPEYKDRHGRPLLRVTFDWNENDKRSAH FMADRSVELGKAMGAETVVRSEPTTRPFSPMDNLSSHTTGGAVMGDDPRTSALNRYLQSW DVHNTFVVGASAFANNGGYNPTGTVGALTLWAAEAIKTRYLKAPGPLVEA >gi|316920349|gb|ADCU01000001.1| GENE 887 967036 - 968349 811 437 aa, chain + ## HITS:1 COG:PA2266 KEGG:ns NR:ns ## COG: PA2266 COG2010 # Protein_GI_number: 15597462 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Pseudomonas aeruginosa # 50 427 28 423 439 303 40.0 5e-82 MTAKKVIAAVVGVAVIAGAGFVGYKTWHNASQKHDFIAPPSLSSTGKTALERGEYLARAG DCVACHTAEGGKPYAGGMGLDTPFGKIMVSNITPDKETGIGGWSDQQFIDAVRQGKGIHG ENLYPAMPYNVYSKVSDADLKDMKAYLDTIPAVHNQVAKTDLPFPFNIRQMMWGWNLLFF DAAPFKTNPQRSSQWNRGAYLVDGLGHCTSCHTPKNLLGADQSGKYLQGGELQGWLAPEI TGNRRQGIGRWTPDQVVSYLGTGSNSHAVAAGPMGEAIDNSLQYMNKDDLRAMAEYLQSL PGSRDNSVPLTAAQETMQRGAKIYQDNCMACHKADGSGVEGMIPALAGNSGIQAPSATNV LRALMLGGQGVATHSNPTAAAMPEFAWKLDDQQLSDVATFIRNGWGNQSPAVNTQDVANA RKSLSASNPLNNPRNTQ >gi|316920349|gb|ADCU01000001.1| GENE 888 968600 - 970273 1448 557 aa, chain + ## HITS:1 COG:yojH KEGG:ns NR:ns ## COG: yojH COG0579 # Protein_GI_number: 16130147 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli K12 # 25 525 18 518 548 714 69.0 0 MLCKILIMPAFNKTILSLTTLALFVSSATWAKDETTQKTDFLLIGGGIMSASLGTWLQEL QPEWKQVMVEKLDGVALESSNGWNNAGTGHSANMELNYTPERADGSIDVSKALDINEQFM ISRQFWSAQVKRGILNNPHDFINSTPHMSFVWGDKNVNYLTKRYAALQETTLFQGMKFST DHAQIQQWAPLVMQGRDASQKVAATWTPAGTDVNYGEITRQLIGSLKKNDNFSLQTSAEV TEFKRNGDNSWHVTIKDVNSGDEHAIDAKYVFIGAGGGALKLLQKTGIAEAKNYAGFPVG GSFLMTENPEITQQHLEKVYGQASVGAPPMSVPHLDARFIDGKRVVLFGPFATFSTKFLK NGSFFDLLSTTTTSNFIPMTDVGLDNFDLVKYLISQVMLSDDDRFASLQEYYPQARKEDW KLIQAGQRVQIIKKDKEKGGVLKLGTEVVVDQQRTISALLGASPGASTAAPITLNVIKQM FPEQFNSPEWQGKIRGIVPSYGQKLNGNAALTQQVWDETASTLQLTKPPVIQMKANTSAE KAAEEKHQDSPQHDMAL >gi|316920349|gb|ADCU01000001.1| GENE 889 970749 - 971849 807 366 aa, chain - ## HITS:1 COG:ECs4480 KEGG:ns NR:ns ## COG: ECs4480 COG5295 # Protein_GI_number: 15833734 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 3 270 110 368 1588 79 28.0 1e-14 MPLGSGNTAKGQLGAAVGINNTTDGTLNLALGSGNTAKGKLGLALGKNNTTDGTANLALG SGNTASGTHAVALGTDNTAKGTQVLVVGKSSSGVGDKVLVYGNNNAATGNNAVIIGEESS SQGNNTQIHGDGSSIKGNDNTIAGNQSQIVGNTNNIQGHSNRIEGNNNQIVGEKSKIVGH RNQINGDSSTIRGNDSQIAGNNSASVGNSTRVEGNQSYAIGNKTAVTGNNSVAIGHGSQA TTDNEFSVGGNETGNRRITHVAPGINDNDAATVGQTRQWTNQLNKKIDHYQKRANAGIAN AVALGAVPQNWSYDSNFGIGVGQYEGESAFAAKLGFKPRENIAVSVGAGFDSRNNQAFSA GMSFGF Prediction of potential genes in microbial genomes Time: Wed May 18 14:46:26 2011 Seq name: gi|316920095|gb|ADCU01000002.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.2, whole genome shotgun sequence Length of sequence - 264634 bp Number of predicted genes - 268, with homology - 239 Number of transcription units - 162, operones - 52 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 929 428 ## COG5295 Autotransporter adhesin - Prom 1056 - 1115 3.5 + Prom 1739 - 1798 2.6 2 2 Op 1 . + CDS 1946 - 2257 268 ## 3 2 Op 2 . + CDS 2341 - 2676 188 ## Dacet_2686 hypothetical protein 4 2 Op 3 . + CDS 2670 - 3425 624 ## Lebu_2150 nucleotidyl transferase + Term 3505 - 3550 0.8 5 3 Op 1 . + CDS 3563 - 5200 959 ## PSPTO_0711 hypothetical protein 6 3 Op 2 . + CDS 5211 - 5711 288 ## 7 3 Op 3 . + CDS 5712 - 6728 264 ## Fjoh_0346 WavE lipopolysaccharide synthesis + Term 6796 - 6835 1.0 + Prom 7001 - 7060 6.8 8 4 Op 1 26/0.000 + CDS 7160 - 7546 184 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component 9 4 Op 2 . + CDS 7543 - 8280 184 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 10 4 Op 3 . + CDS 8287 - 8925 147 ## Dacet_2683 hypothetical protein 11 4 Op 4 . + CDS 8915 - 9553 551 ## COG0637 Predicted phosphatase/phosphohexomutase 12 4 Op 5 . + CDS 9550 - 10611 609 ## Dacet_2685 putative nucleotidyltransferase + Prom 10644 - 10703 3.1 13 5 Op 1 . + CDS 10723 - 12738 1536 ## COG3240 Phospholipase/lecithinase/hemolysin 14 5 Op 2 . + CDS 12793 - 14784 1234 ## COG3240 Phospholipase/lecithinase/hemolysin + Term 14811 - 14872 4.1 15 6 Tu 1 . + CDS 14892 - 15329 243 ## COG1835 Predicted acyltransferases + Prom 15541 - 15600 3.2 16 7 Op 1 . + CDS 15770 - 15991 119 ## 17 7 Op 2 . + CDS 16053 - 16307 125 ## 18 8 Tu 1 . + CDS 16421 - 16714 172 ## Spro_4668 hypothetical protein + Term 16791 - 16827 3.0 + Prom 17562 - 17621 3.4 19 9 Tu 1 . + CDS 17813 - 18088 168 ## + Prom 18114 - 18173 3.8 20 10 Tu 1 . + CDS 18264 - 18500 259 ## S3211 hypothetical protein + Term 18549 - 18594 8.5 + Prom 18524 - 18583 4.4 21 11 Op 1 . + CDS 18626 - 19021 157 ## 22 11 Op 2 . + CDS 19082 - 19903 523 ## YpsIP31758_0602 hypothetical protein 23 11 Op 3 . + CDS 19900 - 21303 879 ## COG4964 Flp pilus assembly protein, secretin CpaC 24 11 Op 4 . + CDS 21300 - 21803 312 ## 25 11 Op 5 7/0.048 + CDS 21816 - 22928 784 ## COG4963 Flp pilus assembly protein, ATPase CpaE 26 11 Op 6 8/0.048 + CDS 22928 - 24208 807 ## COG4962 Flp pilus assembly protein, ATPase CpaF 27 11 Op 7 9/0.048 + CDS 24212 - 25084 503 ## COG4965 Flp pilus assembly protein TadB 28 11 Op 8 5/0.214 + CDS 25084 - 25923 725 ## COG2064 Flp pilus assembly protein TadC 29 11 Op 9 . + CDS 25910 - 26647 679 ## COG5010 Flp pilus assembly protein TadD, contains TPR repeats 30 11 Op 10 . + CDS 26647 - 27138 333 ## YpsIP31758_0595 TadE-like family protein 31 11 Op 11 . + CDS 27170 - 27688 334 ## YE3643 putative tight adherance operon protein 32 12 Op 1 . + CDS 27854 - 28060 111 ## 33 12 Op 2 . + CDS 28036 - 29286 915 ## COG4961 Flp pilus assembly protein TadG + Term 29343 - 29380 1.2 34 13 Op 1 . + CDS 29658 - 30200 562 ## 35 13 Op 2 . + CDS 30254 - 30769 226 ## 36 13 Op 3 . + CDS 30786 - 33350 1697 ## EcE24377A_D0036 fimbrial usher family protein 37 13 Op 4 . + CDS 33358 - 34050 568 ## Bmul_5207 hypothetical protein 38 13 Op 5 . + CDS 34054 - 34947 593 ## 39 13 Op 6 . + CDS 34958 - 35470 372 ## + Term 35541 - 35584 2.1 40 14 Tu 1 . + CDS 35844 - 36233 186 ## KPK_2631 transcriptional regulator, LuxR family + Term 36470 - 36520 0.6 41 15 Tu 1 . - CDS 36410 - 37750 1088 ## ETAE_1316 phosphoanhydride phosphorylase - Prom 37789 - 37848 3.1 - Term 37817 - 37862 0.0 42 16 Tu 1 . - CDS 37903 - 38316 248 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 38352 - 38411 6.3 43 17 Op 1 . - CDS 38478 - 39338 547 ## COG4542 Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase 44 17 Op 2 . - CDS 39331 - 39516 110 ## 45 17 Op 3 . - CDS 39532 - 40350 618 ## COG0007 Uroporphyrinogen-III methylase 46 17 Op 4 1/0.452 - CDS 40359 - 41588 757 ## COG0282 Acetate kinase 47 17 Op 5 4/0.262 - CDS 41590 - 42030 284 ## COG4917 Ethanolamine utilization protein 48 17 Op 6 2/0.381 - CDS 42035 - 42385 349 ## COG4810 Ethanolamine utilization protein 49 17 Op 7 2/0.381 - CDS 42400 - 42957 511 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 50 17 Op 8 1/0.452 - CDS 42983 - 44374 1060 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 51 17 Op 9 6/0.119 - CDS 44367 - 45254 708 ## COG1454 Alcohol dehydrogenase, class IV - Prom 45382 - 45441 2.4 52 18 Op 1 2/0.381 - CDS 45493 - 46881 989 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P 53 18 Op 2 2/0.381 - CDS 46881 - 47900 708 ## COG2096 Uncharacterized conserved protein 54 18 Op 3 . - CDS 47916 - 48191 373 ## COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein 55 18 Op 4 . - CDS 48195 - 48692 380 ## YE2738 putative propanediol utilization protein 56 18 Op 5 2/0.381 - CDS 48689 - 49339 462 ## COG4869 Propanediol utilization protein 57 18 Op 6 5/0.214 - CDS 49339 - 49938 376 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 58 18 Op 7 . - CDS 49960 - 50235 395 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 59 18 Op 8 . - CDS 50248 - 50622 275 ## YE2734 putative propanediol utilization protein: diol dehydratase reactivation 60 18 Op 9 . - CDS 50619 - 52490 1515 ## YE2733 putative propanediol utilization protein: diol dehydratase reactivation 61 18 Op 10 1/0.452 - CDS 52588 - 53112 500 ## COG4910 Propanediol dehydratase, small subunit 62 18 Op 11 . - CDS 53127 - 53801 580 ## COG4909 Propanediol dehydratase, large subunit 63 18 Op 12 2/0.381 - CDS 53814 - 55478 1400 ## COG4909 Propanediol dehydratase, large subunit 64 18 Op 13 4/0.262 - CDS 55499 - 56311 751 ## COG4816 Ethanolamine utilization protein 65 18 Op 14 . - CDS 56308 - 56592 253 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein - Prom 56627 - 56686 1.7 + Prom 57021 - 57080 6.7 66 19 Tu 1 . + CDS 57213 - 58028 755 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 58034 - 58082 9.2 + Prom 58055 - 58114 4.0 67 20 Tu 1 . + CDS 58314 - 59216 574 ## COG4936 Predicted sensor domain + Term 59440 - 59474 -0.3 68 21 Op 1 12/0.024 + CDS 59874 - 60122 155 ## COG2875 Precorrin-4 methylase 69 21 Op 2 . + CDS 60220 - 61179 632 ## COG2073 Cobalamin biosynthesis protein CbiG 70 22 Op 1 . - CDS 61622 - 62941 319 ## Bpet3218 putative Zn-dependent proteases 71 22 Op 2 . - CDS 62980 - 64248 279 ## Bpet3217 transmembrane protein - Prom 64347 - 64406 5.1 + Prom 64399 - 64458 6.8 72 23 Tu 1 . + CDS 64483 - 64818 243 ## COG2076 Membrane transporters of cations and cationic drugs 73 24 Tu 1 . - CDS 65248 - 65544 74 ## - Prom 65647 - 65706 7.3 74 25 Op 1 5/0.214 + CDS 65889 - 66533 147 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 75 25 Op 2 . + CDS 66539 - 67039 186 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 76 26 Tu 1 . + CDS 67448 - 68008 -96 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 68155 - 68201 3.0 77 27 Tu 1 . + CDS 68944 - 69381 262 ## COG1566 Multidrug resistance efflux pump + Term 69438 - 69481 0.1 78 28 Tu 1 . - CDS 69791 - 70264 -88 ## - Prom 70455 - 70514 4.4 + Prom 70059 - 70118 4.1 79 29 Tu 1 . + CDS 70272 - 70928 128 ## COG0477 Permeases of the major facilitator superfamily + Term 70941 - 70984 6.1 - Term 71387 - 71425 4.0 80 30 Tu 1 . - CDS 71464 - 72108 399 ## COG3443 Predicted periplasmic or secreted protein - Prom 72141 - 72200 6.3 81 31 Tu 1 10/0.024 - CDS 72547 - 74061 591 ## COG0531 Amino acid transporters - Term 74078 - 74117 7.2 82 32 Op 1 10/0.024 - CDS 74135 - 76507 1234 ## COG1982 Arginine/lysine/ornithine decarboxylases 83 32 Op 2 . - CDS 76614 - 78080 338 ## COG0531 Amino acid transporters - Prom 78193 - 78252 7.3 - Term 78740 - 78784 -0.9 84 33 Tu 1 . - CDS 78840 - 79835 471 ## COG1609 Transcriptional regulators - Prom 79878 - 79937 5.7 + Prom 80187 - 80246 5.4 85 34 Op 1 . + CDS 80354 - 81508 409 ## COG0477 Permeases of the major facilitator superfamily 86 34 Op 2 . + CDS 81529 - 82956 731 ## COG1621 Beta-fructosidases (levanase/invertase) + Term 82964 - 83010 5.2 87 35 Op 1 . + CDS 83035 - 84390 356 ## Kvar_0810 putative glycoporin RfaY 88 35 Op 2 . + CDS 84417 - 85367 387 ## COG0524 Sugar kinases, ribokinase family + Term 85408 - 85437 2.1 - Term 85396 - 85425 2.1 89 36 Op 1 14/0.000 - CDS 85488 - 86579 1210 ## COG0012 Predicted GTPase, probable translation factor - Prom 86610 - 86669 6.5 - Term 86594 - 86631 1.4 90 36 Op 2 . - CDS 86714 - 87304 501 ## COG0193 Peptidyl-tRNA hydrolase - Prom 87336 - 87395 5.1 + Prom 87418 - 87477 6.8 91 37 Tu 1 . + CDS 87619 - 87891 366 ## NT01EI_1558 hypothetical protein + Term 87998 - 88035 0.0 - Term 88042 - 88086 8.9 92 38 Tu 1 . - CDS 88104 - 89051 994 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 89273 - 89332 2.8 - Term 89162 - 89196 -0.9 93 39 Op 1 13/0.000 - CDS 89359 - 90231 508 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 94 39 Op 2 . - CDS 90228 - 90848 678 ## COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis - Prom 90955 - 91014 3.3 + Prom 90992 - 91051 5.3 95 40 Op 1 9/0.048 + CDS 91094 - 92371 1143 ## COG0373 Glutamyl-tRNA reductase 96 40 Op 2 32/0.000 + CDS 92408 - 93490 1151 ## COG0216 Protein chain release factor A 97 40 Op 3 6/0.119 + CDS 93490 - 94332 443 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase 98 40 Op 4 6/0.119 + CDS 94386 - 94784 341 ## COG3094 Uncharacterized protein conserved in bacteria 99 40 Op 5 8/0.048 + CDS 94781 - 95590 785 ## COG2912 Uncharacterized conserved protein + Term 95608 - 95646 2.5 + Prom 95625 - 95684 2.4 100 41 Tu 1 . + CDS 95757 - 96611 959 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase + Term 96669 - 96700 2.4 - Term 96650 - 96695 7.6 101 42 Tu 1 . - CDS 96718 - 98424 1221 ## COG0659 Sulfate permease and related transporters (MFS superfamily) - Prom 98555 - 98614 3.6 - Term 99372 - 99409 7.1 102 43 Tu 1 . - CDS 99430 - 100044 587 ## COG3065 Starvation-inducible outer membrane lipoprotein - Prom 100104 - 100163 2.7 - Term 100110 - 100158 0.2 103 44 Op 1 . - CDS 100261 - 100737 351 ## COG4702 Uncharacterized conserved protein - Term 100749 - 100789 1.4 104 44 Op 2 . - CDS 100802 - 100948 59 ## - TRNA 101123 - 101212 58.0 # Ser GGA 0 0 + Prom 101356 - 101415 1.9 105 45 Tu 1 . + CDS 101451 - 101876 519 ## COG1764 Predicted redox protein, regulator of disulfide bond formation + Term 101920 - 101953 4.7 - TRNA 101956 - 102045 58.0 # Ser GGA 0 0 - Term 102117 - 102150 -0.8 106 46 Tu 1 . - CDS 102200 - 103396 871 ## COG4134 ABC-type uncharacterized transport system, periplasmic component - Prom 103419 - 103478 6.6 107 47 Tu 1 . - CDS 103543 - 103755 66 ## - Prom 103787 - 103846 2.1 108 48 Op 1 . + CDS 103715 - 105190 1485 ## COG3104 Dipeptide/tripeptide permease 109 48 Op 2 3/0.310 + CDS 105242 - 106183 968 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Term 106240 - 106281 1.0 + Prom 106229 - 106288 2.0 110 49 Tu 1 . + CDS 106336 - 106902 523 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family + Term 106985 - 107021 -0.6 + Prom 107023 - 107082 3.2 111 50 Tu 1 . + CDS 107152 - 107730 582 ## COG3381 Uncharacterized component of anaerobic dehydrogenases + Term 107764 - 107800 3.5 - Term 107752 - 107788 3.5 112 51 Tu 1 . - CDS 107825 - 108388 588 ## ETAE_1421 predicted lipoprotein - Prom 108427 - 108486 5.4 - Term 108693 - 108745 5.6 113 52 Tu 1 . - CDS 108767 - 109972 1145 ## COG0477 Permeases of the major facilitator superfamily - Prom 110152 - 110211 4.5 + Prom 109996 - 110055 5.5 114 53 Op 1 5/0.214 + CDS 110266 - 110850 834 ## PROTEIN SUPPORTED gi|15801183|ref|NP_287200.1| ribosomal-protein-S5-alanine N-acetyltransferase 115 53 Op 2 4/0.262 + CDS 110891 - 111547 674 ## COG3132 Uncharacterized protein conserved in bacteria 116 53 Op 3 5/0.214 + CDS 111558 - 112469 739 ## COG0673 Predicted dehydrogenases and related proteins + Term 112477 - 112508 -1.0 + Prom 112497 - 112556 2.1 117 54 Tu 1 . + CDS 112613 - 114151 1041 ## PROTEIN SUPPORTED gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 + Prom 114265 - 114324 3.0 118 55 Tu 1 . + CDS 114369 - 114956 376 ## PFL_1400 hypothetical protein + Term 114987 - 115015 1.0 - Term 114974 - 115002 1.0 119 56 Tu 1 . - CDS 115044 - 116774 1891 ## COG0018 Arginyl-tRNA synthetase - Prom 116865 - 116924 4.1 + Prom 116866 - 116925 3.0 120 57 Tu 1 . + CDS 117009 - 117572 539 ## COG3102 Uncharacterized protein conserved in bacteria + Term 117615 - 117651 1.1 - Term 117592 - 117648 14.1 121 58 Tu 1 . - CDS 117655 - 118797 882 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities - Prom 118960 - 119019 2.8 + Prom 118920 - 118979 2.5 122 59 Tu 1 . + CDS 119070 - 119825 749 ## COG3142 Uncharacterized protein involved in copper resistance + Term 119896 - 119930 3.5 123 60 Op 1 17/0.000 - CDS 119939 - 120910 962 ## COG0500 SAM-dependent methyltransferases 124 60 Op 2 . - CDS 120907 - 121749 632 ## COG0500 SAM-dependent methyltransferases - Prom 121929 - 121988 3.4 + Prom 121885 - 121944 4.2 125 61 Tu 1 . + CDS 122001 - 123362 1163 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 123378 - 123416 4.8 126 62 Tu 1 . - CDS 123972 - 124367 324 ## COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily - Prom 124399 - 124458 3.3 127 63 Tu 1 . - CDS 124507 - 125325 441 ## COG1801 Uncharacterized conserved protein - Prom 125528 - 125587 3.8 + Prom 125647 - 125706 6.1 128 64 Tu 1 . + CDS 125740 - 125943 141 ## COG2331 Uncharacterized protein conserved in bacteria + Prom 125952 - 126011 4.3 129 65 Op 1 5/0.214 + CDS 126052 - 127842 1936 ## COG0173 Aspartyl-tRNA synthetase 130 65 Op 2 7/0.048 + CDS 127842 - 128276 333 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 128289 - 128341 6.4 + Prom 128301 - 128360 2.8 131 66 Op 1 8/0.048 + CDS 128395 - 129141 779 ## COG0217 Uncharacterized conserved protein 132 66 Op 2 14/0.000 + CDS 129138 - 129659 378 ## COG0817 Holliday junction resolvasome, endonuclease subunit + Term 129679 - 129710 3.4 + Prom 129676 - 129735 5.0 133 66 Op 3 29/0.000 + CDS 129760 - 130374 668 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 134 66 Op 4 . + CDS 130397 - 131404 1062 ## COG2255 Holliday junction resolvasome, helicase subunit + Term 131416 - 131467 10.1 - Term 131411 - 131448 4.4 135 67 Op 1 42/0.000 - CDS 131474 - 132259 832 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 136 67 Op 2 . - CDS 132256 - 133047 193 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 133075 - 133134 5.7 + Prom 133032 - 133091 6.5 137 68 Op 1 . + CDS 133121 - 134131 568 ## COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin 138 68 Op 2 1/0.452 + CDS 134145 - 135470 987 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 135491 - 135526 2.0 + Prom 135559 - 135618 4.6 139 69 Tu 1 . + CDS 135641 - 136603 768 ## COG1560 Lauroyl/myristoyl acyltransferase + Term 136633 - 136661 3.7 - Term 136619 - 136649 4.1 140 70 Tu 1 . - CDS 136675 - 138117 1562 ## COG0469 Pyruvate kinase - Prom 138270 - 138329 4.7 - Term 138272 - 138315 1.0 141 71 Tu 1 . - CDS 138383 - 139252 554 ## COG1737 Transcriptional regulators + Prom 139493 - 139552 5.7 142 72 Op 1 15/0.000 + CDS 139732 - 141207 1488 ## COG0364 Glucose-6-phosphate 1-dehydrogenase + Term 141208 - 141234 -0.6 143 72 Op 2 5/0.214 + CDS 141295 - 141990 205 ## PROTEIN SUPPORTED gi|163781723|ref|ZP_02176723.1| 50S ribosomal protein L13 144 72 Op 3 8/0.048 + CDS 141998 - 143812 1615 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Term 143814 - 143859 -0.2 + Prom 143817 - 143876 8.3 145 73 Tu 1 . + CDS 144065 - 144706 823 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase + Term 144806 - 144836 4.3 + Prom 145235 - 145294 4.7 146 74 Op 1 12/0.024 + CDS 145329 - 145760 444 ## COG2076 Membrane transporters of cations and cationic drugs 147 74 Op 2 . + CDS 145747 - 146076 534 ## COG2076 Membrane transporters of cations and cationic drugs + Term 146094 - 146131 7.1 - Term 146085 - 146115 3.0 148 75 Op 1 2/0.381 - CDS 146127 - 147311 913 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 149 75 Op 2 2/0.381 - CDS 147311 - 148765 1238 ## COG1757 Na+/H+ antiporter - Prom 148837 - 148896 2.8 - Term 148825 - 148864 -0.9 150 76 Op 1 1/0.452 - CDS 148911 - 149915 626 ## COG1609 Transcriptional regulators 151 76 Op 2 . - CDS 149919 - 150263 479 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 150501 - 150560 3.2 152 77 Tu 1 . + CDS 150501 - 150818 450 ## ASA_3888 hypothetical protein + Term 150840 - 150876 2.2 + Prom 150884 - 150943 3.6 153 78 Tu 1 . + CDS 151045 - 152886 1566 ## COG1199 Rad3-related DNA helicases + Prom 152977 - 153036 2.9 154 79 Op 1 7/0.048 + CDS 153079 - 153780 620 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 155 79 Op 2 . + CDS 153846 - 154457 552 ## COG3065 Starvation-inducible outer membrane lipoprotein + Term 154477 - 154514 7.8 - Term 154465 - 154500 7.4 156 80 Tu 1 . - CDS 154513 - 155394 649 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 157 81 Tu 1 . - CDS 155546 - 155752 80 ## + Prom 155688 - 155747 6.5 158 82 Tu 1 . + CDS 155847 - 157529 1623 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 157557 - 157592 7.4 + Prom 157532 - 157591 3.4 159 83 Tu 1 . + CDS 157648 - 158763 868 ## COG0349 Ribonuclease D + Term 158799 - 158839 9.1 - Term 159093 - 159134 7.4 160 84 Op 1 22/0.000 - CDS 159149 - 159418 242 ## COG0851 Septum formation topological specificity factor 161 84 Op 2 22/0.000 - CDS 159422 - 160234 822 ## COG2894 Septum formation inhibitor-activating ATPase 162 84 Op 3 . - CDS 160260 - 160943 351 ## COG0850 Septum formation inhibitor + Prom 160978 - 161037 3.0 163 85 Tu 1 . + CDS 161080 - 161364 273 ## COG3100 Uncharacterized protein conserved in bacteria + Prom 161400 - 161459 2.0 164 86 Tu 1 . + CDS 161601 - 162257 623 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) + Prom 162279 - 162338 2.7 165 87 Tu 1 . + CDS 162364 - 162819 358 ## COG2983 Uncharacterized conserved protein + Term 162860 - 162900 2.2 - Term 163272 - 163307 -0.7 166 88 Tu 1 . - CDS 163438 - 164004 421 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 164027 - 164086 4.9 - Term 164202 - 164242 3.5 167 89 Tu 1 . - CDS 164271 - 164462 207 ## - Prom 164508 - 164567 3.6 - Term 164637 - 164667 2.7 168 90 Tu 1 . - CDS 164692 - 165222 332 ## COG1495 Disulfide bond formation protein DsbB - Prom 165251 - 165310 1.9 + Prom 164951 - 165010 3.9 169 91 Tu 1 . + CDS 165237 - 165371 67 ## 170 92 Tu 1 . - CDS 165333 - 166910 1033 ## COG3067 Na+/H+ antiporter - Prom 167024 - 167083 5.3 + Prom 166988 - 167047 5.6 171 93 Tu 1 . + CDS 167156 - 167287 182 ## + Term 167302 - 167353 14.3 - Term 167284 - 167343 5.0 172 94 Op 1 9/0.048 - CDS 167358 - 167696 278 ## COG2879 Uncharacterized small protein 173 94 Op 2 . - CDS 167689 - 169755 1862 ## COG1966 Carbon starvation protein, predicted membrane protein + Prom 169976 - 170035 4.8 174 95 Tu 1 . + CDS 170140 - 171444 1158 ## COG1252 NADH dehydrogenase, FAD-containing subunit + Term 171468 - 171506 8.5 + Prom 171590 - 171649 5.3 175 96 Tu 1 . + CDS 171777 - 172316 561 ## COG3134 Predicted outer membrane lipoprotein + Term 172335 - 172381 3.5 - Term 172328 - 172361 4.7 176 97 Tu 1 . - CDS 172371 - 175832 3205 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) - Prom 175948 - 176007 6.0 - Term 176073 - 176114 11.3 177 98 Op 1 . - CDS 176134 - 178674 1540 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 178697 - 178756 2.2 178 98 Op 2 . - CDS 178810 - 179466 161 ## - Prom 179641 - 179700 9.1 + Prom 180206 - 180265 3.6 179 99 Op 1 23/0.000 + CDS 180301 - 181500 1096 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 180 99 Op 2 23/0.000 + CDS 181493 - 182212 236 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 181 99 Op 3 5/0.214 + CDS 182212 - 183462 1079 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 182 99 Op 4 5/0.214 + CDS 183492 - 184403 291 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 183 100 Tu 1 . + CDS 184578 - 185294 671 ## COG0846 NAD-dependent protein deacetylases, SIR2 family + Term 185327 - 185383 4.0 - Term 185214 - 185249 -0.0 184 101 Op 1 8/0.048 - CDS 185372 - 186007 507 ## COG1475 Predicted transcriptional regulators 185 101 Op 2 . - CDS 186004 - 187227 695 ## COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase - Prom 187353 - 187412 7.7 186 102 Tu 1 . - CDS 187447 - 188568 950 ## COG2850 Uncharacterized conserved protein - Prom 188656 - 188715 5.3 - Term 188682 - 188713 1.1 187 103 Op 1 40/0.000 - CDS 188746 - 190218 1000 ## COG0642 Signal transduction histidine kinase 188 103 Op 2 . - CDS 190218 - 190889 715 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Term 190899 - 190935 8.0 189 103 Op 3 . - CDS 190955 - 191581 556 ## YPTB2433 putative lipoprotein - Prom 191672 - 191731 3.8 190 104 Op 1 2/0.381 - CDS 191897 - 193183 781 ## COG2010 Cytochrome c, mono- and diheme variants 191 104 Op 2 . - CDS 193198 - 194976 1138 ## COG2303 Choline dehydrogenase and related flavoproteins 192 104 Op 3 . - CDS 194976 - 195707 447 ## Spro_2016 gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3) - Prom 195859 - 195918 7.3 + Prom 195765 - 195824 4.3 193 105 Op 1 . + CDS 195982 - 196131 74 ## 194 105 Op 2 4/0.262 + CDS 196119 - 197369 1180 ## COG0477 Permeases of the major facilitator superfamily 195 105 Op 3 5/0.214 + CDS 197447 - 198487 805 ## COG1397 ADP-ribosylglycohydrolase 196 105 Op 4 . + CDS 198487 - 199434 604 ## COG0524 Sugar kinases, ribokinase family + Term 199602 - 199640 -1.0 197 106 Op 1 5/0.214 - CDS 199477 - 199815 313 ## COG5606 Uncharacterized conserved small protein 198 106 Op 2 . - CDS 199808 - 200209 198 ## COG4679 Phage-related protein - Prom 200439 - 200498 4.5 - Term 200442 - 200482 3.2 199 107 Tu 1 . - CDS 200507 - 201268 666 ## COG2188 Transcriptional regulators - Prom 201312 - 201371 2.9 - Term 201403 - 201434 2.5 200 108 Op 1 9/0.048 - CDS 201465 - 202835 1394 ## COG0015 Adenylosuccinate lyase - Term 202873 - 202904 4.1 201 108 Op 2 . - CDS 202906 - 203532 512 ## COG2915 Uncharacterized protein involved in purine metabolism - Prom 203555 - 203614 3.7 - Term 203624 - 203658 0.0 202 109 Tu 1 . - CDS 203702 - 204760 727 ## COG2199 FOG: GGDEF domain - Prom 204816 - 204875 3.8 - Term 204857 - 204901 5.1 203 110 Tu 1 . - CDS 204920 - 206023 1095 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain - Prom 206059 - 206118 5.8 - Term 206070 - 206105 2.6 204 111 Op 1 2/0.381 - CDS 206174 - 206857 446 ## COG5343 Uncharacterized protein conserved in bacteria 205 111 Op 2 . - CDS 206854 - 207417 362 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 206 111 Op 3 . - CDS 207480 - 208064 605 ## COG2335 Secreted and surface protein containing fasciclin-like repeats - Prom 208159 - 208218 2.7 207 112 Op 1 . - CDS 208257 - 208724 452 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 208 112 Op 2 . - CDS 208734 - 209669 407 ## ESA_01756 hypothetical protein 209 113 Tu 1 . - CDS 209778 - 210413 373 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 210514 - 210573 7.0 + Prom 210478 - 210537 5.8 210 114 Tu 1 . + CDS 210631 - 211884 1513 ## COG0538 Isocitrate dehydrogenases + Term 211896 - 211933 2.1 211 115 Tu 1 . - CDS 212273 - 212731 191 ## COG2153 Predicted acyltransferase - Prom 212752 - 212811 3.6 + Prom 212999 - 213058 5.3 212 116 Tu 1 . + CDS 213220 - 213381 81 ## 213 117 Tu 1 . - CDS 213596 - 213874 176 ## ROD_14901 putative outer membrane protein - Prom 213979 - 214038 2.3 - Term 213979 - 214026 8.0 214 118 Tu 1 . - CDS 214045 - 214551 469 ## COG3479 Phenolic acid decarboxylase - Prom 214617 - 214676 5.3 + Prom 214525 - 214584 5.4 215 119 Tu 1 . + CDS 214649 - 215509 545 ## COG0583 Transcriptional regulator + Term 215532 - 215567 -0.7 + Prom 215604 - 215663 4.6 216 120 Tu 1 . + CDS 215690 - 216229 569 ## COG3122 Uncharacterized protein conserved in bacteria + Term 216251 - 216293 5.5 + Prom 216392 - 216451 3.4 217 121 Tu 1 . + CDS 216489 - 216971 411 ## ECA1580 putative cold-shock protein + Prom 217057 - 217116 6.5 218 122 Tu 1 . + CDS 217149 - 217745 32 ## COG1045 Serine acetyltransferase + Term 217898 - 217933 3.4 + Prom 217901 - 217960 8.7 219 123 Op 1 4/0.262 + CDS 217984 - 218403 265 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 220 123 Op 2 . + CDS 218403 - 219671 273 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Term 219579 - 219626 2.1 221 124 Tu 1 . - CDS 219735 - 220187 271 ## ETAE_1314 hypothetical protein - Prom 220212 - 220271 1.6 + Prom 220391 - 220450 5.3 222 125 Tu 1 . + CDS 220687 - 221034 330 ## SEN1365A hypothetical protein 223 126 Tu 1 . - CDS 221180 - 222106 264 ## PROTEIN SUPPORTED gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 222167 - 222226 5.0 + Prom 222036 - 222095 3.6 224 127 Op 1 . + CDS 222211 - 223116 461 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 + Prom 223121 - 223180 1.6 225 127 Op 2 . + CDS 223202 - 223405 148 ## + Term 223421 - 223450 2.8 - Term 223399 - 223445 7.2 226 128 Tu 1 . - CDS 223471 - 223914 358 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 223957 - 224016 4.5 227 129 Tu 1 . + CDS 224216 - 225667 683 ## COG0840 Methyl-accepting chemotaxis protein - Term 225602 - 225631 0.2 228 130 Tu 1 . - CDS 225718 - 226245 187 ## COG0583 Transcriptional regulator - Prom 226458 - 226517 2.2 229 131 Tu 1 . - CDS 226960 - 227304 361 ## COG2076 Membrane transporters of cations and cationic drugs 230 132 Tu 1 . - CDS 227708 - 227887 200 ## 231 133 Op 1 . + CDS 228170 - 228580 291 ## 232 133 Op 2 . + CDS 228610 - 228981 351 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 228994 - 229022 -0.3 + Prom 229236 - 229295 5.0 233 134 Op 1 . + CDS 229539 - 230039 284 ## ETAE_1906 hypothetical protein 234 134 Op 2 6/0.119 + CDS 230044 - 231270 722 ## COG2199 FOG: GGDEF domain 235 134 Op 3 . + CDS 231305 - 231790 187 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 + Term 231816 - 231853 4.1 236 135 Tu 1 . + CDS 232363 - 233865 1282 ## COG0477 Permeases of the major facilitator superfamily + Term 233885 - 233915 2.1 + Prom 233894 - 233953 4.9 237 136 Tu 1 . + CDS 234050 - 234193 134 ## 238 137 Tu 1 . - CDS 234275 - 234553 305 ## Spro_2355 hypothetical protein - Prom 234590 - 234649 4.6 + Prom 234530 - 234589 5.2 239 138 Op 1 . + CDS 234726 - 235619 734 ## COG2116 Formate/nitrite family of transporters + Prom 235624 - 235683 2.5 240 138 Op 2 . + CDS 235718 - 236392 501 ## COG2095 Multiple antibiotic transporter + Term 236407 - 236450 6.5 + Prom 236435 - 236494 2.9 241 139 Tu 1 . + CDS 236536 - 236952 317 ## COG2259 Predicted membrane protein + Term 236978 - 237007 2.8 242 140 Tu 1 . - CDS 236985 - 237443 249 ## COG1683 Uncharacterized conserved protein + TRNA 237699 - 237786 60.9 # Ser TGA 0 0 + TRNA 237792 - 237867 91.8 # Thr TGT 0 0 + Prom 238011 - 238070 2.5 243 141 Tu 1 . + CDS 238103 - 238357 214 ## YE1904 hypothetical protein + Term 238376 - 238419 9.8 244 142 Tu 1 . - CDS 238455 - 238631 266 ## - Prom 238688 - 238747 6.8 + Prom 238789 - 238848 6.0 245 143 Op 1 33/0.000 + CDS 238873 - 239952 996 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 246 143 Op 2 35/0.000 + CDS 239888 - 240940 659 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 247 143 Op 3 . + CDS 240930 - 241694 207 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Term 241448 - 241500 0.1 248 144 Tu 1 . - CDS 241691 - 242428 305 ## COG0725 ABC-type molybdate transport system, periplasmic component - Prom 242479 - 242538 5.2 - Term 242601 - 242640 7.1 249 145 Op 1 9/0.048 - CDS 242656 - 243417 881 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Term 243425 - 243460 -0.5 250 145 Op 2 . - CDS 243483 - 244319 755 ## COG3717 5-keto 4-deoxyuronate isomerase - Prom 244390 - 244449 4.6 + Prom 244700 - 244759 3.9 251 146 Tu 1 . + CDS 244913 - 245434 557 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein + Term 245463 - 245493 1.0 + Prom 245451 - 245510 4.1 252 147 Tu 1 . + CDS 245732 - 248431 2515 ## COG1048 Aconitase A + Term 248479 - 248516 7.1 + Prom 248612 - 248671 5.5 253 148 Tu 1 . + CDS 248723 - 249559 583 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component + Term 249564 - 249601 8.0 - Term 249552 - 249589 8.0 254 149 Op 1 1/0.452 - CDS 249629 - 249955 542 ## COG3099 Uncharacterized protein conserved in bacteria 255 149 Op 2 . - CDS 249998 - 251458 1296 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Prom 251563 - 251622 3.7 - Term 251882 - 251914 7.0 256 150 Tu 1 . - CDS 251933 - 252424 620 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) - Prom 252528 - 252587 3.7 - Term 253148 - 253178 3.0 257 151 Tu 1 . - CDS 253215 - 253511 366 ## COG2350 Uncharacterized protein conserved in bacteria - Prom 253608 - 253667 2.6 + Prom 253658 - 253717 3.3 258 152 Tu 1 . + CDS 253910 - 254581 440 ## COG0810 Periplasmic protein TonB, links inner and outer membranes + Term 254595 - 254657 13.8 - Term 254597 - 254630 3.2 259 153 Tu 1 . - CDS 254662 - 255090 388 ## COG1607 Acyl-CoA hydrolase - Prom 255117 - 255176 3.7 - Term 255119 - 255161 3.1 260 154 Tu 1 . - CDS 255209 - 255754 526 ## COG2917 Intracellular septation protein A - Prom 255778 - 255837 4.5 + Prom 255901 - 255960 3.1 261 155 Tu 1 . + CDS 255983 - 257755 1421 ## COG0659 Sulfate permease and related transporters (MFS superfamily) + Term 257912 - 257945 -0.7 - Term 257777 - 257817 12.2 262 156 Tu 1 1/0.452 - CDS 257869 - 259260 1481 ## COG1823 Predicted Na+/dicarboxylate symporter - Prom 259421 - 259480 5.3 263 157 Tu 1 . - CDS 259504 - 260046 379 ## COG1988 Predicted membrane-bound metal-dependent hydrolases - Prom 260074 - 260133 2.7 - Term 260141 - 260182 7.5 264 158 Tu 1 . - CDS 260196 - 260906 621 ## COG0637 Predicted phosphatase/phosphohexomutase - Prom 260957 - 261016 3.2 + Prom 260906 - 260965 4.1 265 159 Tu 1 . + CDS 261085 - 261630 438 ## YE1891 putative yfeABCD locus regulator - Term 261795 - 261829 3.1 266 160 Tu 1 . - CDS 261982 - 262854 711 ## COG3001 Fructosamine-3-kinase - Prom 263041 - 263100 4.3 267 161 Tu 1 . - CDS 263138 - 263458 345 ## NT01EI_1737 hypothetical protein - Prom 263481 - 263540 7.9 + Prom 263459 - 263518 6.7 268 162 Tu 1 . + CDS 263649 - 264278 282 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 264300 - 264355 12.2 Predicted protein(s) >gi|316920095|gb|ADCU01000002.1| GENE 1 2 - 929 428 309 aa, chain - ## HITS:1 COG:ECs4480 KEGG:ns NR:ns ## COG: ECs4480 COG5295 # Protein_GI_number: 15833734 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 66 286 135 354 1588 74 31.0 3e-13 MYRSHNVYLSIFATTLIFSPHSAFADESPSAAPLVSISDIAKIGTDIATGNIPGLISDVI KILPSNIHLGPGSTSSGTLTAAIGNKASSDGTLTLALGNKVSTKGVATIAAGSEDNASGL LTSAIGIKNNAGGLLTSALGISNTSSGVATLALGMNNTTSGFMNSAVGIGNTATGAFGLA LGKNNTTDGVANIALGSGNSAKGQLGVAVGKNNTTDGTANLALGSGNTAKGQLGAAVGTN NTTDGTLNLALGSGNTAKGKLGLALGKNNTTDGTANLALGSGNTAKGQLGAAVGINNTTD GTLNLALGS >gi|316920095|gb|ADCU01000002.1| GENE 2 1946 - 2257 268 103 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFQPYLFVEFDPLEVNISSVNSSPGVSYFVRYGDEPRALPKALIDALMIQTYTQIAPADA EVQDEKYLELKERLKSLITNENTIKRTYAFLALLDELLNETRH >gi|316920095|gb|ADCU01000002.1| GENE 3 2341 - 2676 188 111 aa, chain + ## HITS:1 COG:no KEGG:Dacet_2686 NR:ns ## KEGG: Dacet_2686 # Name: not_defined # Def: hypothetical protein # Organism: D.acetiphilus # Pathway: not_defined # 1 107 1 107 108 137 59.0 1e-31 MKKTRIDSMTRGWFVGDFTPSLFRTQNVEVAVQHFRAGEHERRHFHKIATEITVIVSGRV RMSGVEYIAGDIIEIAPGEATDFYAIEDTVTTVVKLPGALNDKYIVEDEAC >gi|316920095|gb|ADCU01000002.1| GENE 4 2670 - 3425 624 251 aa, chain + ## HITS:1 COG:no KEGG:Lebu_2150 NR:ns ## KEGG: Lebu_2150 # Name: not_defined # Def: nucleotidyl transferase # Organism: L.buccalis # Pathway: not_defined # 1 247 1 244 246 290 56.0 3e-77 MLNIVIPMAGRGSRFALAGYSDPKPLIKIGHRRMIELVINNLRPRRLHRFIFICQKEHLK AYNLKEILEELAPGCIVVAIDGITEGAASTVLCAKRFICNKDPLMIANSDQWVDVNIDSY LAAMDGQNLDGLIMTMKANDPKWSYVEFDNKKLVKRVVEKQVVSDEATVGIYNYRSGRDF CELAEAMITCNDRSNGEFYVAPVYTYMYERDRARIGVFNVGEEANGMYGLGTPEDLDLFK SLPVCQKALSF >gi|316920095|gb|ADCU01000002.1| GENE 5 3563 - 5200 959 545 aa, chain + ## HITS:1 COG:no KEGG:PSPTO_0711 NR:ns ## KEGG: PSPTO_0711 # Name: not_defined # Def: hypothetical protein # Organism: P.syringae # Pathway: not_defined # 31 499 67 540 591 310 37.0 7e-83 MLISFSPVEGNISTRKFIVNGTSRFMNEFDGDVALINVQNDSALYAHLLWDVAHQLKVGQ YLYIKEAIATESMLERAYYHEAFQRIETSELGFDIYEKVQRLPVEKEQGLEQWSFCIPVG PDEPTFLNACVERILELDVPQKEILLCGMPHPDFKYFDKVRIVGTDIPAPPVHITRKKNV LAQEARYENLCIIHDRVLLPSNFWSAMVAFGDHYPLTGLQSFYFVDKHNLIPRKYSDFNS IEQDLTRELDIHHVGKKDIPLISKLFYCYQHPARSQFGHDYLTGSLYIAKKSLWQFCPQN EALYWNDYEDIEHGIRASAAGIPSIINPHTLTQSMNARSVIHYYGYVGIRDYRGKEQMSR SLMELLPFVARKPLFRISDEDARKRMYAFAKKYGVTKQTLLKVTSAKMSGMGRYLLIKAV MKEVTVQLSCVSEFIDDFSRNILCEEMAPNELIKVVRIIFSSASPDTKKGVLVGSFILNN QLFHSYVYSPFYRKKTDWFIKKNSTTALCTWISAFYLKHFYKGTYLPMKVSEIANLLSIS TPYLR >gi|316920095|gb|ADCU01000002.1| GENE 6 5211 - 5711 288 166 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLSVEGVTEEEYGLWRNNSTLTKIPMLLSKPYIVVNMGFDLELTKNFDLDLTGSHYLVF VKVSNNKEYDIYREHLITLVKMLILSKKSEQFDVDIFIVSAKHDDYRNELWSFFNMSNSY TRVAHLGERGAILKNICMGYLGVKKTESLLKLYGWLGKTFLGSKEE >gi|316920095|gb|ADCU01000002.1| GENE 7 5712 - 6728 264 338 aa, chain + ## HITS:1 COG:no KEGG:Fjoh_0346 NR:ns ## KEGG: Fjoh_0346 # Name: not_defined # Def: WavE lipopolysaccharide synthesis # Organism: F.johnsoniae # Pathway: not_defined # 3 313 7 310 328 90 26.0 1e-16 MKNLSIVIQGPFFCDGILQQSLIDNLAITRSSYPLSEIIVSTWAVKPDLIRQLESAVKEW DVRLVYSPDPGTISFDDGDAKLKSNINRMIVSSLAGISEARNPIVIKIRSDSCLINDDAI QLIEKHLQQDDNLKREESYSIFERRVINCNLFARDARGYLPYLFHPGDIMLIGYKQDLLR LFDIDLANSELFKICASKFFFSVMNFAPEQYIWVNCIKEKTGRMVFSGNSERTSALVSDS ERYYVSNYIPYTAEQLGFEWSKHKDVYASKGLHSIYRYSDWLKLYNLYLFGIKMPLSASD RVHVLITQMMKGYFYIRTSLLKIPYVRHIAIKLFSKRC >gi|316920095|gb|ADCU01000002.1| GENE 8 7160 - 7546 184 128 aa, chain + ## HITS:1 COG:slr0977 KEGG:ns NR:ns ## COG: slr0977 COG1682 # Protein_GI_number: 16329488 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Synechocystis # 11 127 156 275 276 60 30.0 1e-09 MGIRFDVITMLVYFPICVMITLLLAWGLGCFMAILKVKHKDFKHIVPLAMQMLFYASPIV YTQSIVPAQMKRWYEMNPLSGIISLGRYAFLNGGIKPSMGYYLSIAATITIVGTIYFLVN ERKVVDLE >gi|316920095|gb|ADCU01000002.1| GENE 9 7543 - 8280 184 245 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 35 236 16 228 309 75 26 2e-12 MIHFSAVSKIYSSKAVHNKTLREIFSFSKQKNPLKNENENFIAATDISFSIAKGESVAIV GHNGAGKSTLLKLLTQIILPSSGRIKVNGSYSCLLEVGTGFHHELTGSENIYLSGAILGM SHDEVKKKMDDIIAFSEIGDFIDVPVKFYSSGMYLRLAFAIGVHLDSDILVIDEALAVGD SQFQSKCIEKIKQIKLEGKTIVLVSHDENQIKALCTRCLVMDHGKLVYNGSTESALNVYK NIINR >gi|316920095|gb|ADCU01000002.1| GENE 10 8287 - 8925 147 212 aa, chain + ## HITS:1 COG:no KEGG:Dacet_2683 NR:ns ## KEGG: Dacet_2683 # Name: not_defined # Def: hypothetical protein # Organism: D.acetiphilus # Pathway: not_defined # 1 206 1 206 211 194 47.0 1e-48 MQIISHRGYWKHASEKNTYEAFKRSFSLGYGTETDIRDYHGELVISHDIPDADCMSFSDF LKLHTYYDNKLPLALNIKSDGLAPRIKQYVDEWGLTNYFCFDMSIPDMMEYNRCGVEVYF RISEYEQESALALKSKGIWLDGFQRSLVNEDTIRNYIGRGFNVCCVSSELHKRSPQEEWS LMKTFDPLILNSKHLMLCTDFPDDAKEIFYGE >gi|316920095|gb|ADCU01000002.1| GENE 11 8915 - 9553 551 212 aa, chain + ## HITS:1 COG:SPy0640 KEGG:ns NR:ns ## COG: SPy0640 COG0637 # Protein_GI_number: 15674711 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Streptococcus pyogenes M1 GAS # 5 189 4 187 218 96 31.0 4e-20 MANKIKAVIFDMDGVLIDAKDWHYEALNKILQLFGMPISHQDHLTKFDGLPTKDKLEMLS NEKGLSRELHTFINEMKQQYTMEMVYNFCNPMFNHEFALSQLKRDGYHLAVASNSIRNTI QVMLSKANLIQHLEFFLSNQDVVKGKPNPEIYNKAISQLGFRPDECVIVEDNENGIRAAK ASGAHVLEVDTVHDVNYDNISRFIAHIEEAAK >gi|316920095|gb|ADCU01000002.1| GENE 12 9550 - 10611 609 353 aa, chain + ## HITS:1 COG:no KEGG:Dacet_2685 NR:ns ## KEGG: Dacet_2685 # Name: not_defined # Def: putative nucleotidyltransferase # Organism: D.acetiphilus # Pathway: not_defined # 1 245 1 243 243 184 37.0 5e-45 MITIITPMGGASLYEMSAEFSYPKLLNEVNKKTLFEYSQDIYRSLEEEAQRLFLLPVGQD KSLGLSAIVNIVTDGKGTVIPLHGETQGSLCSCLLSIDNFDAENELIIASADHFINDNAQ EIINDFRERKADAGVLTFESLHPKWAYVKKDREGKVVESAEKKAISRDAIAGFFYFRKGR IFIEAAKSVIKKGAVINGEYYISSCLNELVLNGLSVVTRPLADNGYYNFYDNHAIKSFSS RFNSNEYLRHLAVQYIQCLNHHATNKLSDMCHEDVILADAATKMMGKANLKEFYKERLDD HSDTRIDAQRIYSNDNASIIEYVLNLRNMSKKGVDVVEWNSRNKITSVRTYLY >gi|316920095|gb|ADCU01000002.1| GENE 13 10723 - 12738 1536 671 aa, chain + ## HITS:1 COG:STM0570_1 KEGG:ns NR:ns ## COG: STM0570_1 COG3240 # Protein_GI_number: 16763947 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Phospholipase/lecithinase/hemolysin # Organism: Salmonella typhimurium LT2 # 2 427 5 413 413 199 33.0 2e-50 MKKVLCYSALAMSILASAHAQAFDSFYTFGDSLSDGGFIGSQSRFIAGSDSKLYNEILAE HYASDNHAPYTFGGNNYAEAGATADNYASGLLRTDLQISYYLSQNGGVADKNGLYMLWIG ANDISYDVEQSIAKLNFGGLFSTGNDYLLSSAPDAVVTQTQMLLDAGAGYVIVPTLPRAG LTPWTATALFSFAQTILGQNVLDLPRLYKQLDTALRSKGPVDSEAQRQQFVIDSLEQVLA ENGVLLPRQATEKVYEMILNMENTLTDQFNYSTEQGLAQLNGNIVRADVGKLFDEIITSS KEYGFDNVLAPVCQIGVGAPQCKETSASFHDDQVYMFSDWFHPSPEAHAVIAQYIMSVID APYYATTLSKALESANDEHRAFLEGQLQSLRTNPTEEKVSVFGGYSGKYRHAKSSNSDLD GRDTSNSGNIGFSIQAAPWLAVGGMMSAGAGDFKVSDHYKYDYNGKVMSLFMQATADNGL WGNLDTSFGDMDLNGISRKIQLGKAVRTEKGSTQASSFGVALNLGYDYSVTDYLTTGPVI GYSYDKYKVDGYRERGNNSTSMHFGDQRHELNTVSAGWRIDTRTLPVNPYFEVSYHRNFN DDPISVAGAVNSTATSFTRQGAEIQKEWVNAKLGASAKLTDKLGLFGVVNYNGGNNSSDE VNYSVGVNYIF >gi|316920095|gb|ADCU01000002.1| GENE 14 12793 - 14784 1234 663 aa, chain + ## HITS:1 COG:STM0570_1 KEGG:ns NR:ns ## COG: STM0570_1 COG3240 # Protein_GI_number: 16763947 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Phospholipase/lecithinase/hemolysin # Organism: Salmonella typhimurium LT2 # 26 400 26 399 413 217 35.0 5e-56 MQPHRLALLASLISATAFCANANGRFDNLYTFGDSLTDTGSFGSTYKFVANNQTSLLYNQ QIAKMMGIDFKPFTQGGGNYAISGSQTEGTGVAVDQPLVWMGTKEQINTYLSDHDGKADK NGLYILWTGGNDISLAIMNNPLSPYGEIDRAVGNVAEQTQTLLDNGAGTVIVPNIPNIAD TPFLPTIMLTMLPLSTQQLEVIRQELNNASTPDEASRKTAIVNAMAKGLGLPGLADSVIS PVYDFLHNTLTSMLEYNNQQTEQALSQLHGNIVRADVSTLFHEVLEQPQAFGFKTTVGFP CSFKVFGPYCNTGMNGYDDSQLYMFSDEHHPSPYLHQIIAEYFVSILDAPLYVSSLIHAT EGMVEDARSTLDGQYQTLRTHQHELNDVQVFGGYSSHYLRRSGKNDSTFANAPSNDSTNN GSIGISWQMSEYGTAGVMISGGLNHNTPTENFSYDSHGISYGLFTQWQAPQGGWLNADMH YTKANLENIERQITLGLSNRTESGDTKAHQYGGRIGAGWDIPVSSWLTTGPVLGYSWDKV HVDGYRENGNRSTSMHFSDQNKTLQTGSVGWRFDMSYYDVKPYLQVDYQRQLGDRDSKVS AAINSTATSFTTSTNKGRQDSVKAVVGANFPLNKTLKGYISTSYSNQNRDDMFSYTLGLS ASF >gi|316920095|gb|ADCU01000002.1| GENE 15 14892 - 15329 243 145 aa, chain + ## HITS:1 COG:RSp0635 KEGG:ns NR:ns ## COG: RSp0635 COG1835 # Protein_GI_number: 17548856 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Ralstonia solanacearum # 6 144 7 147 375 73 35.0 1e-13 MQERKNIDVIQAFRGVAALSVVLYHYSWFISPLDQTFLRHGYFGVDLFFMISGFLAYITA RNFSGGVHDSFIYLTKRATRIIPTYYIVTIAYFVTYWAMGLPNENLLLNTLKSLLFIPLN GGVAPAFGYALVESGWTLNYEFFFI >gi|316920095|gb|ADCU01000002.1| GENE 16 15770 - 15991 119 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYLLHMAVMFSSIYVLKKINSDNYFDTFNHRFDLLVITLIITYLLSYLSYIYIENKLSTY IKEKVLTMYIRKK >gi|316920095|gb|ADCU01000002.1| GENE 17 16053 - 16307 125 84 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDSHDISSKLADNFNRLSAEAALTERERYVVYLIMKGITTTTITKILNRSIKTISAQKCS AYEKLGVSNDVQFIRKVISSTKDE >gi|316920095|gb|ADCU01000002.1| GENE 18 16421 - 16714 172 97 aa, chain + ## HITS:1 COG:no KEGG:Spro_4668 NR:ns ## KEGG: Spro_4668 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 41 91 13 63 70 71 64.0 1e-11 MGGTMRSEKLPRQLKKQEILKTLHRLCKNRASVQGGKGYLPEPEHWPKTRELSDSCGVSI YTTRAILLQLVEEGKVIKSPKSLLNSLRWYVKEESEH >gi|316920095|gb|ADCU01000002.1| GENE 19 17813 - 18088 168 91 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGSVLRENKSIPDLATESRINVMPLATSAGFTEELISPLDSVGYQTHSESSGTGNEWYHS RRWNIFISVLALLAVCWISTLIVIVIFFLAK >gi|316920095|gb|ADCU01000002.1| GENE 20 18264 - 18500 259 78 aa, chain + ## HITS:1 COG:no KEGG:S3211 NR:ns ## KEGG: S3211 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 77 1 77 79 87 72.0 2e-16 MNNFLTKCYVAAHVRFHEFGKDQRGVTAIEYALIGVAMATLLAFILGDQNSGFLGALKEA FDKIAEAIQSVTISKTAP >gi|316920095|gb|ADCU01000002.1| GENE 21 18626 - 19021 157 131 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLMIKINFIVTCIILVFIMWQDIFFRKITHSSLLLLFVSLIPLIFLQQQWPNVTFAILT LMGGFLLFVARLWGGGDAKLVAILALAFQGALFYDFLFLTAFLGGTIAIFGLVFFVIICV VTAFPMVLPFL >gi|316920095|gb|ADCU01000002.1| GENE 22 19082 - 19903 523 273 aa, chain + ## HITS:1 COG:no KEGG:YpsIP31758_0602 NR:ns ## KEGG: YpsIP31758_0602 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis_IP31758 # Pathway: not_defined # 1 271 1 273 273 112 28.0 2e-23 MNHRMLFFLSIIVIAVGIAGIFVQKKTPENEVKQDAITAVNTITVAKAVRELKPYDILKR DDYTLTSIEVAQDIKDRRDISSLDNGDLQGYLVRHNISNGSFILPHMVESPSSSTFAAHS LRSNETPYSYKVKPEDDYLLSSLSIGDEVSLYLRLIEVDKSKKNSVGLVTEGSNIPDANM KRYAISRVMGPLSIVDIKKIPKEKTKSYSNEDFVGTIVLRLDSQQLAELKVVEKAGELLL FPFDEYEDESNQKIRMDEVLPQFNSVKELRGGE >gi|316920095|gb|ADCU01000002.1| GENE 23 19900 - 21303 879 467 aa, chain + ## HITS:1 COG:PM0852 KEGG:ns NR:ns ## COG: PM0852 COG4964 # Protein_GI_number: 15602717 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, secretin CpaC # Organism: Pasteurella multocida # 29 467 18 470 470 321 38.0 2e-87 MSFSLTEQRKTHSKTGRAGIGALWLISIAGLFFSVHTRAQELYMDAGESQVIQVNGNIDT IFISAPKVADYEIIGERGVMVYAKSEGKTDLIAFDKNGDQLVKTTLVVDPILSSLQKKVS SLVPDSQITLQKMGKTYILSGSVATEEDRDRVYQIVGEGVGATRTTNKKEVANTNGGSGG NGENSNSWLDEVVYQEVINQLKLPMTNQVNVKLSVVEVTKTFSDNVGIDWGTISGSGGNI TPGTFRFVKFNADTLSSLVHAISNDSVARVLAEPNLSVLSGESAEFLVGGEVPVVTSSAN GSNVQYKDFGIKLNVGAKVSSNKRIRVTLGEEVSNVDSTYSTNAGDSFPAFQTRRAKTTV ELADGESFLLGGLISNNEREELSRLPFIGDVPILGALFRNAKTERSRGELVVVATVNLVK PVTMRDIVMPDFQRTSTLSRFLNFDAISNLRDRKLAQEFVEQGGFIK >gi|316920095|gb|ADCU01000002.1| GENE 24 21300 - 21803 312 167 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMLSKHRFITPLFVVSLLLTTSQSLASQLDKQGSPQITEQIIEIASSDQISKEIGIGKIL SQASGGFNGYIRLEWFDDNFSATAKQIRHELIAKGIVPERITLAYTGGGYRTQQASGIQA HVQKIVLQLPECRYLAQNYKFSLYDDTGCALNNNLGSSLVSPYKYYF >gi|316920095|gb|ADCU01000002.1| GENE 25 21816 - 22928 784 370 aa, chain + ## HITS:1 COG:YPO0691 KEGG:ns NR:ns ## COG: YPO0691 COG4963 # Protein_GI_number: 16121014 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaE # Organism: Yersinia pestis # 11 350 48 388 410 243 36.0 5e-64 MLLFPQKGDVKSSLNEKAFYVLSSRKIINEELSQLIRLAGFNQVESVLQDLHATKTLTIS EKDYGIVIDIGHQEYIEDIVPTILAMVPRGVWCCVVGDSDSIMLAQAFLRQGIQYFNLNS QRELFVQAAISGTNLKATRWAVSISILGCKGGVGNSSIAYQTISNIVQLRDMPSLFVQGA AGSRDLDLLTGKKMVQEIVAGQKNLDLMSSSSAFYPDLSQDSFQKYNFVLFEEAINTANK ETLRQLVESSSCLVLVMDRSMASVRVARGMIEVIDSLNRSQLAPRRLFICLNDSRPFTMN MLSMEDIQSLLGRPLDVYFPYNKQKDGVTRLAGFSRKAAPIDRLTRLILGGTSGNKGSLI NRLLKKRQEV >gi|316920095|gb|ADCU01000002.1| GENE 26 22928 - 24208 807 426 aa, chain + ## HITS:1 COG:YPO0690 KEGG:ns NR:ns ## COG: YPO0690 COG4962 # Protein_GI_number: 16121013 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Yersinia pestis # 1 423 1 423 428 535 66.0 1e-152 MDISIEIQEVLREGVLQNIEINTIEALVEDRVQLLAEMNRVLEGVAEQQNIYLSSQTQNA FAEMMADEILGYGPLRPLLEDETVSDILVNGPKSIYVERFGKLELTTCRFINNNQLTDIA KRLVQKVGRRLDEGRPLVDARLHDGSRLNVAIPPIALDGTSISIRKFGKSNIELSDLIRM GAMSGQMANFLIIAARCRVNIIISGGTGSGKTTLLNALSKYIDPSERIITMEDAAELRMM QPHVLRMETRLAGVENTGQITMRALLINSLRMRPDRIIVGECRGEESFEMLQAMNTGHDG SMSTLHANNPRDAISRLENMVMMAGMNIPMESIRRNIVSAINIIIQVSRLNDGSRKIMNI SEVMGIEGDRVILQDIFTFQSQSERDENGKIKGEFVNHGLLMRSTVMRNAVMFDVSDELK HIFGME >gi|316920095|gb|ADCU01000002.1| GENE 27 24212 - 25084 503 290 aa, chain + ## HITS:1 COG:PM0848 KEGG:ns NR:ns ## COG: PM0848 COG4965 # Protein_GI_number: 15602713 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadB # Organism: Pasteurella multocida # 1 289 1 290 291 211 38.0 2e-54 MAFLILFIGLAIFCVNLFNWRKLTKIASKSHANPKPSLIINYVTNLWLEWKRYALGDLSL KGMKGAMVALILLLVLLFLNANWLQFDVMFFLPITLMVMFIAQLRIGRSLHRRYFEDRFP EILSVVNAAVSAGNSIHQALHRCGEGIDGDLGVTFHRIDRRLNLGEDPERVFNDAWENYR YREFYFFVVVMLVSLQHGGQLRTLMGRLSRIVNNSKNMARRKSAMTSEARTSAKIVASLP LLFFCGMKYFSPENFDFVVHDPVGRLILYYVIASEAIGMIIIWILLRRAL >gi|316920095|gb|ADCU01000002.1| GENE 28 25084 - 25923 725 279 aa, chain + ## HITS:1 COG:PM0847 KEGG:ns NR:ns ## COG: PM0847 COG2064 # Protein_GI_number: 15602712 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadC # Organism: Pasteurella multocida # 1 276 5 282 284 166 36.0 4e-41 MVMSYLVMVLLGIFMVLLAIRHQQYWKKQREIVAPKAESKQQNQYSTIDYRALIISNSQW LTFLNDLEKSLPLKARICGVIGGVLLVLNIVGIFSISMKALAMIMLFIFMIVLVLPAMML NPAINTRIKLMLDALPYFVDLIAVCVQAGMTVESSVKFIAERSADLDKNLADLMLHLVKR AEVSGLEEGLMDLYRSMDMTEMRMFCATLQQSVHYGTSLYENLMELSKDIRDMQLLNSEE KIGKLSAKMSVPLILFIMFPITILIAAPGILRIMQNAHF >gi|316920095|gb|ADCU01000002.1| GENE 29 25910 - 26647 679 245 aa, chain + ## HITS:1 COG:YPO0687 KEGG:ns NR:ns ## COG: YPO0687 COG5010 # Protein_GI_number: 16121010 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadD, contains TPR repeats # Organism: Yersinia pestis # 12 238 1 232 244 199 46.0 4e-51 MHISKHIVVALMCATLLSGCIQRVPSSTSDMNYREDILLKAKNYNGLINLYRSWLKQKED PAVRLKLARYYYQSGDYKSSLYFMQPLFKTPDLNVYTLQAQNMIALGDYPQAIRVAEKIL QREPQSAEAYNLKGVAQAQSGKLTEGLQSIEKARSLFIADDVAINNMAMVAVLDHRYQDA VSLLLPQYLRGRKQSQLLHNLVLSLVKVGDRRYARDIIINEGLSERSDELIDALAMINPT EKGMG >gi|316920095|gb|ADCU01000002.1| GENE 30 26647 - 27138 333 163 aa, chain + ## HITS:1 COG:no KEGG:YpsIP31758_0595 NR:ns ## KEGG: YpsIP31758_0595 # Name: not_defined # Def: TadE-like family protein # Organism: Y.pseudotuberculosis_IP31758 # Pathway: not_defined # 6 155 7 155 156 116 38.0 3e-25 MALRKRFIRDNEGAASIEFSLTVILFIFLVLFVAEIARLSYISAVIDLAVSEAAKESKNA SAVDDGGYDNRFQKRITEQGGAIWGFLTRPDAVTMNITYAGSIREMTDTGGTSGDSRYKP LARYQLEYQYHPMFFPFPDIWANNLLNREVIFVQEYERSKFMD >gi|316920095|gb|ADCU01000002.1| GENE 31 27170 - 27688 334 172 aa, chain + ## HITS:1 COG:no KEGG:YE3643 NR:ns ## KEGG: YE3643 # Name: tadF # Def: putative tight adherance operon protein # Organism: Y.enterocolitica # Pathway: not_defined # 6 172 28 192 192 122 39.0 4e-27 MISIALIFFIFFLTDLVIRQATIGKLDRVSYSVAGILRERIQLYDARETLNQQDVNAIAD LARRILTDMNSTIDLSQMSMHVEEMHFEDPIRLGDDRKQIKLYKSWDSGSSGQCLPPQPL NQLQQLTPRGSYGRWVPLYQVTVCLPTFSWFTRLTSSEEKPVMSSFSIVMLR >gi|316920095|gb|ADCU01000002.1| GENE 32 27854 - 28060 111 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKIEVFDINPAGPEFIGEVKYIHDRTGKAVAKYRPGPLPYLICFNDNKAGSRGTLNNKEQ LCLCSNHC >gi|316920095|gb|ADCU01000002.1| GENE 33 28036 - 29286 915 416 aa, chain + ## HITS:1 COG:YPO0684 KEGG:ns NR:ns ## COG: YPO0684 COG4961 # Protein_GI_number: 16121007 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadG # Organism: Yersinia pestis # 7 242 10 255 518 125 35.0 1e-28 MFMQQPLLASIRRFKQDRSGAFAISFVMMSGFLLSMAAFGLEGSRYITERARLSDAMEQA ALALTAEDNGDGAQRNYTLSSDYFRAYMRHDVDVFKPTVIVKSGISPNNQNLSYVEYRVS GQTLQDSWFSSTFFPSFDKQVVIGDNGAARKFRSNMDVIFVTDFSGSMNEGFGGSTKLAE LKRIVLKLSDELFSYNIDNKVGFVPFGWGGKEGIDCDFPFVSHGPVPSDILAGGNYKALE KYIDISGSVAAIPNPVHDIQIPLSNVNGSTCLRNSHSWKVPLTSSLAEINQINGMSAEGG TLVSSGVLLGVPYLASGTASRKVMVIVSDGTDDPKNVMITPNLINAGMCDKIRQVLSTDE SVGKISFIGIAYYPTVDWKSCVGDKNFYLPQTIDELEEDLRRAVFEEVGHNILKDN >gi|316920095|gb|ADCU01000002.1| GENE 34 29658 - 30200 562 180 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKTQTMLSVLAGLVMSASAMASTPASYDTKFNVSANVPDSATITDPGGRPITDMDVELTP AASGYMEAQTTALKLWNNDVTKLEVALTLDDSQSVTGDAFTLYSTQGGTLNDMTYKISTI TAAGSQEFAASGDSKDYTLNANGTHGELPLMFKFVSDKKYDALGQGNYTGVVYANVNAKP >gi|316920095|gb|ADCU01000002.1| GENE 35 30254 - 30769 226 171 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIKNNCVVGIVAALLLWSQAVFSIPNSQVDLDISAESIARIALYYEDRPLNGKEFDFPLP INGISQKFENTSSFFHLIGNVDNAEIVFLENQFVLPQVFGGNTHINLDGSFIHQGGETDS TKKLRLPVLKNISQATTSNGFKVKFISEFLAGNYTKGKYANTFTLIVMPIL >gi|316920095|gb|ADCU01000002.1| GENE 36 30786 - 33350 1697 854 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_D0036 NR:ns ## KEGG: EcE24377A_D0036 # Name: not_defined # Def: fimbrial usher family protein # Organism: E.coli_E24377A # Pathway: not_defined # 28 449 30 455 872 89 24.0 6e-16 MNNKITASIVILGVGFGCAFTPLMASSIPLPEGFEDIFNAKQSGVLDIIYADSSIGSIGV EYDQNDVFLMSPQVIVEQITAVDMPALNVSQTELLKKLSAPLRRVHKQGFSQDEIVATVN ESDASLHLILPASLFKTGDKAYDKTYIPHRNRPGFVHSHNLNYLSDTYGDSLSLSSNDTL NITGNSYVKGAWSYSKEIDFNLDELALYLEHENTRFKAGRQRLSDNLISSTPSVTYSFFN PVSFDGISLGYMTDNYLNPGDGAASPVTVYLPQAGTVEVYRNGRLIDLQQFPAGLQHLNT EGWPSGGYDVLLVSKLVNGSREEKLQPFLKRNGSFRSGDLEYAVQLGRYDDHQGQFSSNR YSCRQCDIDGNDRDRYSRQSHFAGLSLGYTTDSVVSLGSGFLMDNEDGYANASLDLPINS WFAERLYADGVMGLDGSSGYQVGLMKNLYALSMNVSYRDNRFKGDEEDYHRFGLVPAYDF EYLQFGANTFLPWNVGLGINFGLNTLYQDYGRQNKTEFESWDVNLNRDFTLSDYLNLRVD LGYHRGINEMTSRYSHNTTAEDKIFAQFTLGMRERSYNHYQSLYLRSRMSDEGGKQNIYS ADYALNLDNPEFDRGGKYTVNASVNHGPNSENNSGAGLVMDNGYGYTAVGVSKSFGNNHY SQQYLSQRSGFAIGDGEFGYGKVDNTAALIVDARSLPEDQYFEVRNRGNEPVVVEGGKKT TLTIQPYQKISPKAEQVYTTDTNAFYNLSTQSSSTWAMPGQVYHVKVNATKNQTVTGRLY LDGVPLANARVVGGNAMTDAEGLFVGDFTLDTESQLEKLKVSKEGLSYICPLNNSNVKMT QGIMQIREVNCETE >gi|316920095|gb|ADCU01000002.1| GENE 37 33358 - 34050 568 230 aa, chain + ## HITS:1 COG:no KEGG:Bmul_5207 NR:ns ## KEGG: Bmul_5207 # Name: not_defined # Def: hypothetical protein # Organism: B.multivorans # Pathway: not_defined # 60 200 53 197 225 79 35.0 1e-13 MLPLGIALLTSTNISQAIEVFPIIKDIKQESPRDNYVTVKSMYRAVDSVDTTKSENKSYE FVTLELFHITNPGDSKENMVKELGAEDPTLVFSPTKLIIPFGEERKVRIMPLKPVERETL YRLRIRPSYPEQEIDKGKVRFAIGYDVLLRYLPEGKRTQGLAVSCSGNQWTLTATGNVRS EMRDLVIDGRKDKAVFNVYPEHTRALTVNSNLAFNMDGKLYSYEKCQLKE >gi|316920095|gb|ADCU01000002.1| GENE 38 34054 - 34947 593 297 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSPMLLALALFQSSYVLAGSWVIQPQSNGSIRMLHEGISEASGTDTLTVRQPADKSLTL QVSPAGSGRCEGGDLMLGALRFPLKFFMDERQVVCGDLVTFAPPASEKRVGVRAVNRTFK RERSFTLPSSFPRVQIGNVNFNIEDGGGSESYPIYLDLTALQTESATIEATFDKPALSLG LVGELNDATATARLKVAKTLQSGDEPLPYSVTFESTQQKDSHYQLRSSVGANLIPYQISI AGREIEPGFQYRGTLPSGTATVDWVDIKFSLSGKATRGLAAGTRLIDTLTAVITPNS >gi|316920095|gb|ADCU01000002.1| GENE 39 34958 - 35470 372 170 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKDSLVVTTLALALIGVSSSQAAIPVRTSIDLQAEISTSVRVYVAGNDVTNGSISLQLND KNGYMYGVTPAFNFVGNASAVSLSLKTPVANQLISENGDAMQINPAWIRVNGGDVSASYP LNNQAVYPTVQDIPDPSQGVKVQFTSAKRSETYPLGTYSGTYEVIVTPSV >gi|316920095|gb|ADCU01000002.1| GENE 40 35844 - 36233 186 129 aa, chain + ## HITS:1 COG:no KEGG:KPK_2631 NR:ns ## KEGG: KPK_2631 # Name: not_defined # Def: transcriptional regulator, LuxR family # Organism: K.pneumoniae_342 # Pathway: not_defined # 2 112 81 189 206 69 33.0 4e-11 MLKLSSRPHCFDNTMFIHRTERINMLAKKFIYAWARARVMTDRLHGCRQGCRSCSSVELS LQEIKIISYITYGFTLARVANILGLSVKTVSAHKRRVMRKFNIKSNAELIILCRATLQVT NQSKVCFLP >gi|316920095|gb|ADCU01000002.1| GENE 41 36410 - 37750 1088 446 aa, chain - ## HITS:1 COG:no KEGG:ETAE_1316 NR:ns ## KEGG: ETAE_1316 # Name: not_defined # Def: phosphoanhydride phosphorylase # Organism: E.tarda # Pathway: gamma-Hexachlorocyclohexane degradation [PATH:etr00361]; Inositol phosphate metabolism [PATH:etr00562]; Riboflavin metabolism [PATH:etr00740] # 33 443 25 432 444 456 55.0 1e-126 MTISLFNRNKPAIAQRILCPLIVALFSSLPAYASDTAPSGFQLEKVVILSRHGVRAPTKM TQTMRDVTPHQWPEWPVKLGYITPRGEHLISLMGGFYRERLQQQGLLSKDNCPTPDAVYV WADVDQRTRKTGEAFLAGLAPQCDLTIHHQQNIQQADPLFHPVKAGICSMDKSQVRTAVE KQAGAPIETLNQRYQASLALMSSVLDFPKSLYCQQHNIGKLCDFSQAMPSRLAIKDDGNK AALEGAVGLSSTLAEIFLLEHAQGMPKVAWGNIHSEQQWNSLLKLHNAQFDLMSRTPYIA KHNGTPLLQTITHALGADIASHPLPDISPDNKILFIAGHDTNIANISGMLGMTWTLPGQP DNTPPGGALVFERWVDKEGKPYVSVNMVYQTLAQLHDQTPLTLQHPAGSVRLNIPGCSDQ TPDGYCPLSTFSRLVSHSVEPACQLP >gi|316920095|gb|ADCU01000002.1| GENE 42 37903 - 38316 248 137 aa, chain - ## HITS:1 COG:STM0581 KEGG:ns NR:ns ## COG: STM0581 COG2207 # Protein_GI_number: 16763958 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 9 108 6 105 113 76 35.0 1e-14 MNKEKFVTQSFPTVIGWINENLYRGIKADDVIKITGYSRSYFLREFQLSQGVSISSFIRE KRLTASAEMLAHTNMKICEIARELGFPSQSTFCQIFKSYFNMSPTEFRYRSIYQREGFEH ENLHATRTSSECAADPA >gi|316920095|gb|ADCU01000002.1| GENE 43 38478 - 39338 547 286 aa, chain - ## HITS:1 COG:STM2058 KEGG:ns NR:ns ## COG: STM2058 COG4542 # Protein_GI_number: 16765388 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase # Organism: Salmonella typhimurium LT2 # 1 286 13 298 300 307 59.0 2e-83 MAEARCPASCGELIQGWILGGEKLISCPINWFSTVSVTDGCPDDLERPRMRQMLKAVLAY FDQPADMARGLHISFDSTIPVSKGLASSTADIAATALATARHLGETLDETTIANLCVRLE PTDSTVFHQLTLFDHQTAATQISYDWQPCVDILLLESPNTLNTEDYHRRHRLPALQASAP SLMQAWQLFTQAAEHHDYALLGQSTTLSAKASQHLVVKPDFPTLLDLVEDLDLYGLNVAH SGSVVGLLLDRQRHDVEQLYWQLRQRKIHQNYPNQHLLTMVPGGVR >gi|316920095|gb|ADCU01000002.1| GENE 44 39331 - 39516 110 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSQRGGNVLGIAVKIKASAENIVDTVAHYPALTRDRFQAAIKDTVDRLPLANVLLRGAHH G >gi|316920095|gb|ADCU01000002.1| GENE 45 39532 - 40350 618 272 aa, chain - ## HITS:1 COG:lin1164_1 KEGG:ns NR:ns ## COG: lin1164_1 COG0007 # Protein_GI_number: 16800233 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Listeria innocua # 4 244 2 242 252 282 59.0 6e-76 MRSGKVWLVGAGPGDAALITVKGLHAIRQAEALVYDRLVCAELLAEAPDGCEMINVGKTP NNHLVPQPQINQILIDCAQRGLNVVRLKGGDPYVFGRGGEEAEALALAGIPFEVVPGISS AIGGLAYAGIPVTHRDYASGFHVVTGHLRQGNEPQDWATLAKLEGTLIVLMGMTQLSTIC QQLIAGGKAPTTPAAVVMYASHQEQKIASGTLLTLADQTSAQGLSAPALIVIGDVVNLRD TLAFTPQALSLNVIPALIPDIIDGNSNLLHSQ >gi|316920095|gb|ADCU01000002.1| GENE 46 40359 - 41588 757 409 aa, chain - ## HITS:1 COG:STM2057 KEGG:ns NR:ns ## COG: STM2057 COG0282 # Protein_GI_number: 16765387 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Salmonella typhimurium LT2 # 1 401 1 394 404 543 66.0 1e-154 MPSKIMAINAGSSSLKFQLFSMINEQTGQQDEQVLCQGLIERIGMDDAIFNLRVGDVKWR ETLPIADCRQGAEYLLKALIKHNVIESLDEIVGVGHRVAHGGEAFADSVLITPQVLDKIE QLSTLAPLHNPVNALGIRVFQQALPHAYSVAVFDTAFHQTLSQTSYLYALPWRYYEELGI RRYGFHGTSHKYVSTVCAERMGRPLESLRLVSCHLGNGSSICAIANGRSVNTSMGFTPQA GVMMGTRSGDIDPSILPFIQQTEGKSSAEVNHLINNQSGLLGISGISHDYRDVEQAAHDG NPRAEVALALFAERIRAVIGSYIVQLGGIDALIFTGGIGENARNARQQICRDLAFLGIEL DEDKNLKNQAFIQQDHASVHIAIVNTNEELMIARDVLRVALNLPILTTQ >gi|316920095|gb|ADCU01000002.1| GENE 47 41590 - 42030 284 146 aa, chain - ## HITS:1 COG:STM2056 KEGG:ns NR:ns ## COG: STM2056 COG4917 # Protein_GI_number: 16765386 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Salmonella typhimurium LT2 # 1 142 1 141 150 166 59.0 1e-41 MQRIMLIGPSQCGKTSLIQRLRGETLNYQKTQAIIWQDNAIDTPGEYLENRCLYSALLAS ACESDVVGLVQNADATQSWFAPMLAQVFNRPVIGIISKADTVSHATQLDWAADCLAQAGA EHIFITSSQTGEGLADLMTYLNHSGE >gi|316920095|gb|ADCU01000002.1| GENE 48 42035 - 42385 349 116 aa, chain - ## HITS:1 COG:STM2055 KEGG:ns NR:ns ## COG: STM2055 COG4810 # Protein_GI_number: 16765385 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Salmonella typhimurium LT2 # 1 116 1 116 116 174 79.0 3e-44 MEANNPPERVIQEYVPGKQITLAHLIANPNKALYKKLGLNDVSSAIGILTITPSEASIIA SDIATKSGAVEIGFIDRFTGAVVFTGDVSAVEYALKQVIHTLGDMMKFTACQMTRT >gi|316920095|gb|ADCU01000002.1| GENE 49 42400 - 42957 511 185 aa, chain - ## HITS:1 COG:STM2054 KEGG:ns NR:ns ## COG: STM2054 COG4577 # Protein_GI_number: 16765384 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Salmonella typhimurium LT2 # 1 183 1 183 184 268 74.0 3e-72 MSQAIGIVELSSIAKGMEVCDLMLKSANVDLLVSKTLCPGKYLLMVGGDIGAVNQSVQNG ERHSGHLLVDSIVLPNLHPSVLPAISGLNTVENRQAAGVVETWSVAACITAADRAVKSAN VTLVRIHMAFGIGGKCYQVLSGDIADVQTAVEVASQCAGETGLLVYSSVIPRPHEALWRQ LVQEA >gi|316920095|gb|ADCU01000002.1| GENE 50 42983 - 44374 1060 463 aa, chain - ## HITS:1 COG:STM2053 KEGG:ns NR:ns ## COG: STM2053 COG4656 # Protein_GI_number: 16765383 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Salmonella typhimurium LT2 # 46 462 34 450 451 573 71.0 1e-163 MNDIQLSDAHALSTPPAYGELMQCDAATIQQRVRDAGVVGAGGAGFPTAVKLQAQAEIFL VNAAECEPMLKVDQQLIPRQASRLVRGVLYGMTATGAREGIIALKAKYKEAIAALTPLLP AQIRLHILPDVYPAGDEVITIWLATGRRVPPAALPISIGVVVNNVQTLLNVARAVEQQWP VTRRTLTVNGAVARPLTLTVPLGTPLRDVLALAGGATVPRPAYINGGPMMGHALHDLDQP VTKTTGGLLVLPADHLLITRRARSDQDVLAIARTVCEQCRMCTELCPRHLIGHELPPHLL VRAITYQQVATPDILLSALTCSECSLCESYACPVDISPMRINRLLKTQLRAQGARYQGEL READPMANYRMVPISRLIARLDLTDWYQAAPFSEESYLPQQVILPLRQHIGAASEAVVTV GEHVVQGQLIGQIPDNALGAPLHASISGVVTAISHSAITISRD >gi|316920095|gb|ADCU01000002.1| GENE 51 44367 - 45254 708 295 aa, chain - ## HITS:1 COG:STM2052 KEGG:ns NR:ns ## COG: STM2052 COG1454 # Protein_GI_number: 16765382 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Salmonella typhimurium LT2 # 1 293 77 369 370 419 72.0 1e-117 MQALRPNIVIGFGGGSALDAAKAIVWFSRKQGLEIETCIAIPTTSGTGSEVTSACVISDP EKSIKYPLFDDEIYPDIAILDPSLVASVPPAITANTGLDVLTHALEAYVSPHASDFTDAL AEKAVQLVFRHLATACRKGDCLITRGKMHNASTLAGMAFSQSGLGINHAIAHQLGGQFHI AHGLANALLLAPVIRFNAIDTRARKRYARLAKLCHFSPANADDRAAVNQLIHQIALLKRQ CGIPQPLTAMKVTERQLQQRIPDMIAAAQADVTLRTNPRPADDKDIRGIIEALYE >gi|316920095|gb|ADCU01000002.1| GENE 52 45493 - 46881 989 462 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 1 462 1 474 477 385 44 1e-106 MNTNELESLIRTILTEQLMPATVSASNAIFASVDEAINAAHRAFLRYQQSPMKTRSAIIS AIREQLKPQLLSLSERGASETGMGNKEDKFLKNKAALENTPGIEDLATTALTGDGGMVLF EYSPFGVVGSVAPSTNPTETIINNSISMLAAGNAVYFSPHPGAKDVSLDLIAQIEEIVFS SCGIRNLVVTVENPSFEATQQMMAHDKIALLAITGGPGIVAMGMKSGKKVIGAGAGNPPC LVDETAELVKAAQDIVAGASFDYNLPCIAEKSLIVVESVADRLLQQMQAFDALLISHPQE VDNLRKACLTPQGHANKNLVGKSPAELLKAAGIACPAKAPRLLLVEVAGNDPLVTSEQLM PLLPVVRVKDFDAGLTLALQVEGGLHHTATMHSQNVTRLNLAARLLQTSIFVKNGPSYAG IGVGGEGFTTFTIATPTGEGTTSARTFARQRRCVLTNGFSIR >gi|316920095|gb|ADCU01000002.1| GENE 53 46881 - 47900 708 339 aa, chain - ## HITS:1 COG:STM2050_1 KEGG:ns NR:ns ## COG: STM2050_1 COG2096 # Protein_GI_number: 16765380 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 184 1 183 183 206 62.0 7e-53 MSIYTKTGDAGTTALFTGQRVKKHHPRVETYGTLDELNAVLSLCVRVAQGVENLQLLDAV QHQLFYFSAELASVGIDTPPDGQKSITEQDIHALEQAVDRCMAQLPPVHGFILPGNTEAG SRLHFARTLARRCERRLIELAEQVPVRPVLLQYLNRLSDCLYALARDEDQRQQLQQIAQT VAARYLAATTEKPKSMIAHPSADELGFSDVHQLVKQAVDAAIALEIAVVVALVDRHGNMM MTYRMPDALLVSSELAPKKAWTAVALKTATHQLNAAVQPGADLYQLEASTGGKVVSFGGG YPLWRNGQLVGGLGISGGSVAQDMHIAEAAMSALHLRNE >gi|316920095|gb|ADCU01000002.1| GENE 54 47916 - 48191 373 91 aa, chain - ## HITS:1 COG:STM2049 KEGG:ns NR:ns ## COG: STM2049 COG4576 # Protein_GI_number: 16765379 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Salmonella typhimurium LT2 # 1 90 1 90 91 110 74.0 6e-25 MQLARVVGSVVSTQKSPTLIGKKLLLVRRVAGDGSLPPDSNTPDEVAVDSVGAGQGELVL LSAGSSARRVFAEPNDAIDLAIVAIVDECSY >gi|316920095|gb|ADCU01000002.1| GENE 55 48195 - 48692 380 165 aa, chain - ## HITS:1 COG:no KEGG:YE2738 NR:ns ## KEGG: YE2738 # Name: pduM # Def: putative propanediol utilization protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 165 1 165 165 238 83.0 4e-62 MNLTQAQTEQLVSQIVTRLVERERRVHALGLPQLRAGLDSSVFVLHATLHLMLPDLAFIR RLAHDETQCPAVAALHEAWSWGMKVHISLHRQLLPALPAAALRPLPLSFSDSQGVAVRLH AGQVLSYRDIATLSPGWLLIDHHTQVTPLAKDTLSARHIQLLRQE >gi|316920095|gb|ADCU01000002.1| GENE 56 48689 - 49339 462 216 aa, chain - ## HITS:1 COG:STM2047 KEGG:ns NR:ns ## COG: STM2047 COG4869 # Protein_GI_number: 16765377 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol utilization protein # Organism: Salmonella typhimurium LT2 # 1 206 1 206 210 303 78.0 2e-82 MEKTLLEPVVSKILDEMRLRPIPLGVSNRHLHLSVQDYQQLFPNQPLIEKKALLQPGQFA AEQTVTLVGPKGSLKNVRILGPLRSHSQVEISRTDARTLGIHAPLRMSGNLDQTPAIRLV SPYGELELPQGVIVAQRHIHMSPLDALLYRVKHGDCVQVAIQGSGRRLILDDVAIRVSPQ MKLEMHIDTDEANAAGADDPAAFATLRPSSARTQQP >gi|316920095|gb|ADCU01000002.1| GENE 57 49339 - 49938 376 199 aa, chain - ## HITS:1 COG:STM2046 KEGG:ns NR:ns ## COG: STM2046 COG4577 # Protein_GI_number: 16765376 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Salmonella typhimurium LT2 # 1 198 8 159 160 134 43.0 2e-31 MKTSLGLLEVSGLALAIGAADAMAKAASVSLIDIEKTNGSGWMLIRLTGDVASVQAAINT GAAFAQQHHGLVSRAILARPADALMAHWQTPQRESIDPAPATLREPTHKVASERDITEIC VPEKVEAAAEREETAAPLPVDTVTDETSDIAIGEEKQDVKNEAQPALSVSCNLCLDPACR RHKGEPRFRCIHAAKRGKV >gi|316920095|gb|ADCU01000002.1| GENE 58 49960 - 50235 395 91 aa, chain - ## HITS:1 COG:STM2045 KEGG:ns NR:ns ## COG: STM2045 COG4577 # Protein_GI_number: 16765375 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Salmonella typhimurium LT2 # 1 91 1 91 91 121 96.0 4e-28 MNNALGLVETKGLVAAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAG SAAASAVGEVKSCHVIPRPHSDVEAILPTSA >gi|316920095|gb|ADCU01000002.1| GENE 59 50248 - 50622 275 124 aa, chain - ## HITS:1 COG:no KEGG:YE2734 NR:ns ## KEGG: YE2734 # Name: ddrB, pduH # Def: putative propanediol utilization protein: diol dehydratase reactivation # Organism: Y.enterocolitica # Pathway: not_defined # 1 113 1 113 113 191 87.0 9e-48 MNFPNDAPAIVISLTSSTPEAIWHQVLLGIEEEGIPWQWQQDDDADAVQRAWQAATRSPL LVGLACSADEIIVHFRNLPPASPLFRQAWGQDKDQLRQLGNNAARLVKGLPFKLSPKSHS HTPD >gi|316920095|gb|ADCU01000002.1| GENE 60 50619 - 52490 1515 623 aa, chain - ## HITS:1 COG:no KEGG:YE2733 NR:ns ## KEGG: YE2733 # Name: ddrA, pduG # Def: putative propanediol utilization protein: diol dehydratase reactivation # Organism: Y.enterocolitica # Pathway: not_defined # 18 621 3 606 608 1011 96.0 0 MRDYYQQLKAGNMGRHRYIAGVDIGNSSTEVALAQIAADGQLQFVASAMTETTGIKGTQR NIFGINKALNMLVEKAGIALSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKT PGGLGLGVGLTITIDELVTRDPTQPYILVVPSAVDFADVAAVVNAANGAGYRITAIILQR DDGVLVSNRLTQPLPIVDEVLHIDRIPMGMLAAVEVAMPGQVIETLSNPYGIATVFELSA EETKNIVPVARALIGTRSAVVVKTPAGDVKARSIPAGHLELFADGRTVRVDVATGAETIM TAVNSFRHLDNVSGEAGTNIGGMLEHVRHTMAELTNKPANEIFIQDLLAVDTAVPVNVIG GLAGEFSLEQAVGIASMVKSDRLQMAHIASEIEKTLNIDVQVGGAEAEAAILGALTTPGT RRPLAILDLGAGSTDASIINAQGQIVATHLAGAGDMVTMIVASELDLQDRYLAEDIKKYP LAKVESLFHLRHEDGSVQFFPQPLPPEVFARLVVVKPEGLVPLPGNYALEKVRNIRRSAK ERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEIPQLVTDALSHYKLVAGRGNIR ASEGPRNAVATGLILAYQRESGR >gi|316920095|gb|ADCU01000002.1| GENE 61 52588 - 53112 500 174 aa, chain - ## HITS:1 COG:STM2042 KEGG:ns NR:ns ## COG: STM2042 COG4910 # Protein_GI_number: 16765372 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol dehydratase, small subunit # Organism: Salmonella typhimurium LT2 # 1 174 1 173 173 241 80.0 7e-64 MNSEAIESMVRDVLSKMNSLQGQTPAAASAPAASSRSDAKVSDYPLANKHPDWVKTATHK TLDDLTLENVLNGSVTSQDLRITPEILRIQASIAKDAGRPLLAMNFERAAELTAVPDDKV LDIYNALRPYRSSKEELNAIADDLEQTYHATICAAFVREAAVLYVQRKKLKGDD >gi|316920095|gb|ADCU01000002.1| GENE 62 53127 - 53801 580 224 aa, chain - ## HITS:1 COG:mll6722 KEGG:ns NR:ns ## COG: mll6722 COG4909 # Protein_GI_number: 13475607 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol dehydratase, large subunit # Organism: Mesorhizobium loti # 51 224 577 751 756 120 41.0 2e-27 MVDINEKLLRQIIESVLQEVQGDQNAVSFKQENQPAPAATAVASGDFLTEVGEARPGTQQ DEVIIAVGPAFGLSQTANIVGIPHKNILRELIAGIEEEGIKARVIRCFKSSDVAFVAVEG NRLSGSGISIGIQSKGTTVIHQRGLPPLSNLELFPQAPLLTLDTYRLIGKNAARYAKRES PQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELQVAL >gi|316920095|gb|ADCU01000002.1| GENE 63 53814 - 55478 1400 554 aa, chain - ## HITS:1 COG:STM2040 KEGG:ns NR:ns ## COG: STM2040 COG4909 # Protein_GI_number: 16765370 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol dehydratase, large subunit # Organism: Salmonella typhimurium LT2 # 1 553 1 553 554 1052 94.0 0 MKSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGVVTELDGKPQSSFD LIDHFIARYGINLERAEEVMQMDSVKLANMLCDPNVSRRTIVPLTTAMTPAKIVEVVSHM NVVEMMMSMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAFRGFDEQETTVAVARYAP FNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPW SKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSV SCVGVPSAVPSGIRAILAENLICSALDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFI SSGYSAVPNYDNMFAGSNEDAEDFDDYNVLQRDLKVDGGLRPVLEADVVAIRNKAARALQ AVFAGMGLPPITDEEVIAATYAHGSKDMPERSIVEDIKFAQEIISKNRTGLEVVKALAQG GFEDVAQDMLNIQKAKIAGDYLHTSAIIKGNNQVLSAVNDVNDYAGPATGYRLEGARWEE IKNIPNALDPNELG >gi|316920095|gb|ADCU01000002.1| GENE 64 55499 - 56311 751 270 aa, chain - ## HITS:1 COG:STM2039 KEGG:ns NR:ns ## COG: STM2039 COG4816 # Protein_GI_number: 16765369 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Salmonella typhimurium LT2 # 38 270 1 233 233 387 92.0 1e-108 MKSNDLVDQIMAQVIAKVSEHAPASSTQPSYKQRDTAMAEKACSLTEFVGTAIGDTVGLV IANVDSALLDAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGG AGHGSLIIFGGDDVSDVKRAVEVALKELDRTFGDVYGNEAGHIELQYSARASHALEKAFG APLGRSCGVIVGAPASIGVLMADTAVKSANVDVVAYSSPAQGTSFSNEVILVISGDSGAV RQAVISAREIGKTVLATLGSEPKNDRPSYI >gi|316920095|gb|ADCU01000002.1| GENE 65 56308 - 56592 253 94 aa, chain - ## HITS:1 COG:STM2038 KEGG:ns NR:ns ## COG: STM2038 COG4577 # Protein_GI_number: 16765368 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Salmonella typhimurium LT2 # 1 94 1 94 94 124 91.0 5e-29 MQQEALGMVETKGLTAAIEAADTMVKSANVTLVGYEKIGSGLVTVIVRGDVGAVKAATDA GAIAAANVGEVKSTHVIPRPHTDVEKFLPKGNSQ >gi|316920095|gb|ADCU01000002.1| GENE 66 57213 - 58028 755 271 aa, chain + ## HITS:1 COG:STM2037 KEGG:ns NR:ns ## COG: STM2037 COG0580 # Protein_GI_number: 16765367 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Salmonella typhimurium LT2 # 1 264 1 264 264 409 81.0 1e-114 MNDSLKAQCIAEFLGTGLFLFFGISCLAAMKVAGASFGLWEICIVWGLGISLAVYLTAGI SGAHLNPAITIALWLFACFPARKVLPYSLAQIAGAFGGAALSYMLYHNLFTDFEAAHQMV RGSLDSLQLASIFSTFPASAISVWQAAFVEIVITSILMGLIMALTDDGNGVPRGALGPLL IGILVAVIGAATGPLTGFAMNPARDFGPKLFTFFAGWGKVSMTGGRDIPYFIIPIVAPVI GACLGAAIYRFLICNNLPCNACKLEDEKAAH >gi|316920095|gb|ADCU01000002.1| GENE 67 58314 - 59216 574 300 aa, chain + ## HITS:1 COG:STM2036_1 KEGG:ns NR:ns ## COG: STM2036_1 COG4936 # Protein_GI_number: 16765366 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Predicted sensor domain # Organism: Salmonella typhimurium LT2 # 1 198 1 199 199 325 79.0 8e-89 MISASSLNSELINKIAQDFAQATGLAVVVVNIHGEEISELFNFTPFCQLMRQDPVNHLRC RMSDRCGGFEASKSNEPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLHSDVYLIDIL NVDNQWQQDQALMDEFHNVPMMDFSRVIASADLLKLIVENCLKKHLNFVVINDNKDSKEP GRIRPVHPNDSKIKKALRYIDTHLSEELRLEDVAASVYLSPYYFSKLFKKYQGIGFNAWV NQQRMIHAKEMLQHSDWSIASIAKNLGFSQTSYFCKVFRQAYNVTPQVFRSISSERRGVE >gi|316920095|gb|ADCU01000002.1| GENE 68 59874 - 60122 155 82 aa, chain + ## HITS:1 COG:STM2029 KEGG:ns NR:ns ## COG: STM2029 COG2875 # Protein_GI_number: 16765359 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-4 methylase # Organism: Salmonella typhimurium LT2 # 40 82 215 257 257 57 65.0 5e-09 MQHSDKQAFIRIGTGRRCYSRLLTRMPVTQWAPIQEMYRVAEWVHQAAIHKTALILVEAF LGDEYHYSKLYDAGFSHEYRQA >gi|316920095|gb|ADCU01000002.1| GENE 69 60220 - 61179 632 319 aa, chain + ## HITS:1 COG:STM2028 KEGG:ns NR:ns ## COG: STM2028 COG2073 # Protein_GI_number: 16765358 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiG # Organism: Salmonella typhimurium LT2 # 2 317 41 351 351 384 60.0 1e-106 MEAGFLPFNGSFGDTLREAFKQYSALVVVGAIGLTVRVIAPLVNDKMTDPAVVVIDEGGQ HVISLLSGHLGGANALTRYLAGLIGADPVITTATDVNEMAALDTLATQLDAEMHDFRHAA KVVNQMLVSNQKVGLWWDAPLLVERERCDIRGFTPVESLDALPQLDALVCITMRDSLPLP TEQLTALPVYKLVPRRVVAGIGCLHATSLQMLVELLQRQMAENHFDIMALRAIGSAVVKK DQPVLHQLAECWRVPFELFSASELNRHGQHLSAPDFVRQKMEHSCVSQPVAWLMSDGQLV GNTLRQQGITITLGLSHSC >gi|316920095|gb|ADCU01000002.1| GENE 70 61622 - 62941 319 439 aa, chain - ## HITS:1 COG:no KEGG:Bpet3218 NR:ns ## KEGG: Bpet3218 # Name: not_defined # Def: putative Zn-dependent proteases # Organism: B.petrii # Pathway: not_defined # 1 438 1 441 449 521 57.0 1e-146 MIQIVLLLFGVEFVRTKAKYLMLIGILWGVLGVSIFIDGLDGVTYFPLRVFGTLLLVESL ITLSIASSGVGAQKAVLYFKGAIFCSVSILILSNRAYSNLLLAIVFGFAFFVIGLFIISS AWVVRYPHWKNAMLGGIAQIIFALFMFSPYPTHYKATVPVFLGTLMLISGINTARLALRA RQISEGASIFDLLAPSNIQNDLTKHPVSLTSDSSNADFIGPLTVHIWTPVGTANTSPIHR PVINRYIAAVDADGVISTGHAALELSPDIYISLYPESDIDRSPSEFLNILKATQDNNVPG VFQPNYATEAANWCESDRKIYFTQYNGIALLRYWKGYRMTTTYNLTYRNCSSSVAYALEA SLEGVLSEQSKKWSSTLRTLFMPELWIAAQVRKRALSMAWTPGLVMDYARALRSIVHPVS EPWYQRLSIKWRERSNIRK >gi|316920095|gb|ADCU01000002.1| GENE 71 62980 - 64248 279 422 aa, chain - ## HITS:1 COG:no KEGG:Bpet3217 NR:ns ## KEGG: Bpet3217 # Name: not_defined # Def: transmembrane protein # Organism: B.petrii # Pathway: not_defined # 25 361 22 351 412 171 33.0 6e-41 MKAYFPTWLQQSSILLVWGLIFYLAGLTSLKFDDTDSSIAIIWFPAGVAVAAFLSARWRD YPSLIVIFTLANVLLDEDWISPLTFAISMLYSFLSIPSTVIIAWIVRRFARLNDDLHIIL VWIVATLVISALDSVVIVGGFALVHNQPFLELFSQGFIADITGIFFATPIVMGFINKNEP CSASNNVSKSIGFVLWLLLCATASVVFGHELSWVATHATALYFGLACLPIAIVMIICVFW GNLGGSVALLTLGAIVIYFTDQHQGPFFLKSLTYTESLFLALSYLSATTLLVVFIRVLRR STRNHDPETGRIVGNGVFYRLNTSSGSFIWENDLSILLGSMKHGALDNVEKVLQRVHLRD KEKLRSHWIACSQDKRGSIIFRIQTFNDRWITLVDTGSVHTVLDGEDIIVGNWQVSRYHL AL >gi|316920095|gb|ADCU01000002.1| GENE 72 64483 - 64818 243 111 aa, chain + ## HITS:1 COG:YPO2333 KEGG:ns NR:ns ## COG: YPO2333 COG2076 # Protein_GI_number: 16122557 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Yersinia pestis # 3 111 4 112 112 101 59.0 4e-22 MPNTYIILAISICAETLATTMMKASEGFSRLLPSAIVIIGYAISFYGLSQVVKTMNIGIA YAIWAGMGIFLVSIMSFLIYKQKLDLPAIAGMVLIALGIMVIQLFSKSVTH >gi|316920095|gb|ADCU01000002.1| GENE 73 65248 - 65544 74 98 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEIIKLPANLFSLLLISILVVSPAHSEIDSSPLKSWPYDSFFLLSRKIKLTANQFVEMSN TDKNDLVEADDIKNEEKIFLGCEYSDSYTIQNFIYKYT >gi|316920095|gb|ADCU01000002.1| GENE 74 65889 - 66533 147 214 aa, chain + ## HITS:1 COG:Z2207 KEGG:ns NR:ns ## COG: Z2207 COG0243 # Protein_GI_number: 15801637 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 EDL933 # 1 213 29 241 759 338 68.0 6e-93 MDAQYGLIALFHMNKVDGFDCPGCAWPDPKHTSSFDVCENGAKAVSWEATEKRADAEFFK TNTVSELLGWEPRVLEQSVRLTTPLKYDSSTDKYLSIEWEVAFAEIARKLKSFNDPNVVE FYTSGRTSNEAAFLYQLFARMYGTNNFPDCSNMCHEPTSVGLVESVGVGKGTVKLEDFDH CDLVICIGHNPGTNHPRMLTSLREVAQRGQRLLQ >gi|316920095|gb|ADCU01000002.1| GENE 75 66539 - 67039 186 166 aa, chain + ## HITS:1 COG:ydeP KEGG:ns NR:ns ## COG: ydeP COG0243 # Protein_GI_number: 16129460 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 151 246 396 759 177 60.0 7e-45 MQEVGLTSFIAPQTPHEMLTDKGTNLASDYYHVRVGGDIALLKGVMRCLIELHEKSLSQG KEGTLDLEFIQNHTNGYRELRTDVLNTDWRHITESSGISEEDIHRLAASYASAKKTIICY GMGITQHEHGTQNVQQLVNLLLLDHHDKKSGIPAYKSIPIEIEICN >gi|316920095|gb|ADCU01000002.1| GENE 76 67448 - 68008 -96 186 aa, chain + ## HITS:1 COG:appY KEGG:ns NR:ns ## COG: appY COG2207 # Protein_GI_number: 16128547 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 58 182 114 237 249 91 42.0 1e-18 MHELIVFLSTKKLKLVNGKKVSDYYLANFDVHDVFFKTVELSQAQSEQQESKFITHVLML LSYFFDQPQLLSYLLRAVRHVTCLQVEAIIESCPSRNWKLNDIANELCMSASGLKRRLRE EGTCYKKILVKSRLRLAKVLLESKNTSILDVANKCGFSSTSYFISVFKKHYLITPSCYSK GIYCCV >gi|316920095|gb|ADCU01000002.1| GENE 77 68944 - 69381 262 145 aa, chain + ## HITS:1 COG:YPO3267 KEGG:ns NR:ns ## COG: YPO3267 COG1566 # Protein_GI_number: 16123424 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Yersinia pestis # 1 145 244 388 390 171 57.0 5e-43 MAIVPMDQFWLNANFKETQLSRVRIGQKVNFTTDIYGDSVVYTGYVAGINMGTGSAFSLL PAQNASGNWIKIVQRVPVKIMVDIDQLENHPLRIGLSANVKVKTIGGEGSSLPKTQRSTP VYSSETLILDTADVDREIVEIINSN >gi|316920095|gb|ADCU01000002.1| GENE 78 69791 - 70264 -88 157 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAPEYIKYAQLIAKAPMQKLRDLNRLKSINGLDDVASQMIKRIIERTDMIHSITIHLELN QSRSLPLSSIICKQPTPRISKLSPTKFNFTGIVSVSLPFKTIIVVKTTKIPNGIFIKNIH PQLRLSQIYPPKIGPNIGAIMTVIDHKASAIFLFSGA >gi|316920095|gb|ADCU01000002.1| GENE 79 70272 - 70928 128 218 aa, chain + ## HITS:1 COG:ECs3246 KEGG:ns NR:ns ## COG: ECs3246 COG0477 # Protein_GI_number: 15832500 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 215 295 509 512 261 62.0 8e-70 MPQLLQEVFGYTSVWAGLAYSPIGIIPLVIAPIIGHYGNKIDMRILVTFSFIVYSGCYYW RAVTFNTDIDFTAIIVPQFIQGFAVACFFLPLTTITLSGLAPDKFAAATSMSNFFRTLAG SIGTSITITLWSRGGSFHHSNLSDSISSFNEESTDLIKNLSYKGLDLSQSLQYINTQVTQ QSLLVSANDIFYYSSGIFLMLTLIVWFARPPFYTKPAT >gi|316920095|gb|ADCU01000002.1| GENE 80 71464 - 72108 399 214 aa, chain - ## HITS:1 COG:STM1263 KEGG:ns NR:ns ## COG: STM1263 COG3443 # Protein_GI_number: 16764614 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted protein # Organism: Salmonella typhimurium LT2 # 4 214 3 215 215 325 72.0 5e-89 MANYIGKLSLALAALLVSSYVQSHGHHSHGKPMSEVEQQAAAGVFDDKSVKDRELSDWDG VWQSVYPYLQNGELDPVFKKKAGIGQTFEQIKSYYRKGYASDVDTIGIENGVMEFHRGNK ESSCKYDYSGYKILNYASGKKGGRYLFECKDAGSQAPKYVQFSDHIIAPRKSTHFHIFMG NTSQEVLLTEMDNWPTYYPYQLTTQQVVDEMLHH >gi|316920095|gb|ADCU01000002.1| GENE 81 72547 - 74061 591 504 aa, chain - ## HITS:1 COG:CPn1031 KEGG:ns NR:ns ## COG: CPn1031 COG0531 # Protein_GI_number: 15618939 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Chlamydophila pneumoniae CWL029 # 25 504 11 485 485 422 49.0 1e-118 MSNQSSTSVANATTDNESKSGEHKLGLIALIAIVVGSMLGGGVFSLPQNTAATSAIGPII IAWIIAGIGIYFIANSFRLLSDLRPDLQAGVYMYAQEGFGSFIGFNVAWGYWLMTAFGNV AFAVILMDAFNQFFPGVFTDGNNLNSIICGSVLIWGYNFLVLSGTKVAGFINTIGTIAKL IPLVLFVLLLGFLINYSQLLTNFWGTAPHIFEKVNNHSESVSLMSQILAPMTVTLWAFIG VEGAVVLSGRAKNKKDVGKATLLGFIIALIIYMLMSVLPFGVMPQAELAQVSNPSTAGVL AKVVGPWGDWLMNIGLIISVLAGWLAWTMLCAEIPMVAGQKGTFPQAFARTNKKQAANVS LWVSSFVMQAAMLLVYFSNDAWNTMYNISALMVVPAYITTTLYMVKICLNRQYDQYANKG RGLALTSGVLGAIFCLFILYASQIQYVALVPILLTCGLPVFIWSRKEKGKNQPILQNKEI IYLALLLLLDAIVIGLLMTDRISL >gi|316920095|gb|ADCU01000002.1| GENE 82 74135 - 76507 1234 790 aa, chain - ## HITS:1 COG:STM4296 KEGG:ns NR:ns ## COG: STM4296 COG1982 # Protein_GI_number: 16767546 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Salmonella typhimurium LT2 # 7 750 4 744 756 585 39.0 1e-166 MKFNHNILFVSSPRLEQDSPALQSLEELKLAVAERGFSTSVANNLNDAVRLIQESQKYSA IGIYWDANNPDMSAECQNFVQSFRQRNTSTPLFLLSEEDITTQTPLALLKEVAEYIYLFS ETAEFTANRIYTLVHRYAENLLPPYFKTLKNFTEDGDYYWDCPGHMGGMAYLKHPVGAEF INFFGENMMRADIGVATAEMGDYLIHAGPSKKSEDIAAELFGADWTFYGVSGSSGSNRIV AQGAVAADEIAIVDRNCHKSLNHGLTLSQARPVYLKPTRNAYGLIGPIPNQRLKKESIDE LVAKSSLTSDAVSPSPTYAVVTNCTYDGFCYNVNDVVKELGASVPRIHFDEAWYAYARFH PMYKNRFAMDAEDTPERPTIFAVQSTHKMLPSLSMASMIHVKKSSRALLDYDDFNDSFMM HGTTSPFYPIIASIDVAVSMMQGESGRSLVQESIDEAIAFRKAVVSVKRQIHEQEGQSSW FFDVLQPTEVHDKAANTTYSFEQAPLELLNQSADCWELRAGERWHGFQDDDLINTNSMLD PVKVTITCPGINLDGGYQDQGIPGYLITKFLDDRRIEIARTGDYTILILFSVGITKGKWG TLIESLLAFKKLYDTGALAIDAIPSLKGKSPHYDTMTLKQLCQQMHEKMRELDLMNHISA AVNTDPEPVMTPAAAYQKVLRYKAEHIRLDDFSGRIAASMLVPYPPGIPVLMPGERLPHG DKGIMGYLRALQEFDKHYPGFEHEIQGVNVDENGDFWVRAIIEDERDAVKKPEHVRFKRQ VASTIKKGRQ >gi|316920095|gb|ADCU01000002.1| GENE 83 76614 - 78080 338 488 aa, chain - ## HITS:1 COG:CPn1031 KEGG:ns NR:ns ## COG: CPn1031 COG0531 # Protein_GI_number: 15618939 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Chlamydophila pneumoniae CWL029 # 11 488 8 485 485 414 48.0 1e-115 MPTGIKGKDDNQKLGLLALVAIVVSSMIGSGVDGLPQNMAANSEVGPVAIAWLICGFGMF FISRTFIILSNIRPDLQTGIYTYTQQGFGAFCAFIVAWGYWLMTIFSNVAFGIMVMDTLN YFIPGDFRGGNNITSVIGVSILVWGFNFLVLSGTKLAGKIDIVGTIAKLIPLIVFIFILV YLLNVTEITSNIWGNNPSLPQEHLGSVFSQITSPLDVALWCFIGVEGAVALSGRAKNKKD VGKATFIGFVISLVVCILISILPFGVMTQKELSVIPTPSTAGILKVVVGEWGEMLINIGV LISVLSSWLAWTMICAEIPMAAAQNGTFPKSFARKNDKGAASVSLWASSILMQLVVLMVY FSSNAWLAMLAISALTVLPAYLMSTAYLCKLCITGEYKKYAPNGRKTALVTSLIGIIFCL FMVYASEVKYLAMVPILLTLGLPLFIFARIKDSGERNIFQPEEMKFLIFLIVLDLFTGFL FLNDTIKL >gi|316920095|gb|ADCU01000002.1| GENE 84 78840 - 79835 471 331 aa, chain - ## HITS:1 COG:YPO1642 KEGG:ns NR:ns ## COG: YPO1642 COG1609 # Protein_GI_number: 16121910 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 331 1 331 347 364 54.0 1e-100 MASLKDVAKLANVSLMTVSRALNSPEKLKAETLNRVQTAIDHLNYVPDLSAKKIRGARAT PDTIGVLALDTVTTPFSVDITLSIEETARAHGWNSFVVNMFSDDSPETMVDLLLSHRPSG IIYTTMGLRQVPVPHKLLSLPCVLANCESLHEPIASYIPNDEQGQYDAIKSLLARGYRRP LCLHLPANHPATIRRLKGLERAFQEAGIDPNALVHCYMEFGDEHYQDIPAMVLANMPKGM LTFDSVVCGNDRIAFLVYQVLLGRGIRIPEDVGVLGYDNMVGIGELFLPPLSTVQLPHYE IGRLSALHIINSESHRRTVHVKSPLLQRASI >gi|316920095|gb|ADCU01000002.1| GENE 85 80354 - 81508 409 384 aa, chain + ## HITS:1 COG:lacY KEGG:ns NR:ns ## COG: lacY COG0477 # Protein_GI_number: 16128328 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 4 369 32 402 417 260 42.0 3e-69 MLSIWLHQEAGLKATDTGIIFAVLSVSALCAQVCYGFIQDRLGLRKNLLWYITALLILSG PAYLLFGYLLSINILLGSVFGGLFIGLTFNGGIGVLESYTERVARQSTFEFGKARMWGSL GWATATFFAGLLFNINPNLNFLVASCSGIVFFCLLARLKVSTPASLEKVEVGAERVTLED ALRLLTLPRFWALVFFVVGTCIYSVYDQQFPVYFSSQFATLREGNAMFGYLNSFQVFLEA GGMFCAPWLVNRIGAKNGLIFAGMVMALRMIGSGLVEGPLLISITKLLHAVELPILLVSI FKYNSINFDKRLSSTLYLVGFACTSSVIASVLSPLAGYSYEKYGFAQSYLLMGLMVFSTT FISIFLLRGHKSSTAGVLSRSSSL >gi|316920095|gb|ADCU01000002.1| GENE 86 81529 - 82956 731 475 aa, chain + ## HITS:1 COG:ECs3243 KEGG:ns NR:ns ## COG: ECs3243 COG1621 # Protein_GI_number: 15832497 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Escherichia coli O157:H7 # 8 474 9 476 477 523 55.0 1e-148 MTLHIADAEQVLTAKSDQLNTRWYPYYHLAARAGWMNDPNGLVWFDGWFHAFYQHHPYST EWGPMHWGHARSRDLMRWEHLPVALAPEGPEDKDGCFSGSAVVNGNELALIYTGHKFHGD PSSEDNLYQVQCLATSRDGVNFTRKGQILDTPSGLHHFRDPKVWKEREMWYMVVGARVED TGQVRLYRSEDLHHWDEQGILAEAPHGMGYMWECPDFFTLDDKQVLLFSPQGIAAEGYAN RNLFQSGYIVGEWKLGEKFIQESKFQELDHGHDFYAPQSFLAPDGRRIVIGWMDMWESPL PEQQDGWAGMLTLPRELFITPNNQLHMRPVHEVESLREEWYSWPVSTLKNKQLCVMHNCE VAEVIVTWDTSLSEAEQYGIELDDGMRLYIDNQAKRLILERNYPQYNLCGQRSIPMPTGD ELKLRVFFDRSSVEVFVNDGEACLSSRIYPQQRQLNVFAWSGNAVLKECGAWNLR >gi|316920095|gb|ADCU01000002.1| GENE 87 83035 - 84390 356 451 aa, chain + ## HITS:1 COG:no KEGG:Kvar_0810 NR:ns ## KEGG: Kvar_0810 # Name: not_defined # Def: putative glycoporin RfaY # Organism: K.variicola # Pathway: not_defined # 11 451 6 447 447 602 67.0 1e-170 MIVKNRLLLCIGAFSSSLYAQSHLTLEQRISQLEERLIAAEKRAGAAEAEIKILKNKPAE NNKINTDITNNKNTSEFIFNQKSKLKFYGDVEFNLDSASRTGSLTSLKINTNKKLAPSER ERWGVNGRILLGVDGVQHSSNGKYAGFTVQPLADMNGKMNLDDAAFYFGKENDWLMKIGR FEAYDMFPLNQDTFVEYSGNTANDLYSDGYGYIYMMKEARGRSNSGGNLLVSKTLDNWYL ELNTLVEDGSSLFVEQRYHGEKLDNKKNVVYFRPVVSWRSSNYSFAAAMETNAVNNAYGY TDSQGRWHDTSERTGYGLTMTWNSLRTAPQDGMIVNLNTAMMDAKDEQDFSAGINALWHR VELGYIYAHNKISNFNVAGVNGECGNDCAILAPGKYDIHTIHSSWQVPNIMNMPNFNIYL GAYASWLNSSAEEDSSNQPRYGARLRFKYLF >gi|316920095|gb|ADCU01000002.1| GENE 88 84417 - 85367 387 316 aa, chain + ## HITS:1 COG:PM1849 KEGG:ns NR:ns ## COG: PM1849 COG0524 # Protein_GI_number: 15603714 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Pasteurella multocida # 3 305 4 308 308 266 47.0 5e-71 MNIWTLGDAVVDLLPLSNMQYQACAGGAPFNVAVGAAKLGCQSGFIGRVGEDTFGYFLRE SLDKYGVNTHHMQFDDRFRTSTVLVSLATNGEREFTFLVNPSADQFLTLDSLPHLDQDIL HFCSLALVSEECRNTLNSAITNVKGQGGLLSFDVNLREQMWSDREQMFTIIHHFASQADI LKLSEEEWYWLVGTHDFAKAISMLQSIPSRLKVVTYGAQGSMVLWQNQVIHFNGYAVNSV DTTGAGDAFMAGLLAGIAKNNLPVDMPNLYRVVAQASACGALATTQKGALTASPDSMAVG MFISETSPLGYEIADI >gi|316920095|gb|ADCU01000002.1| GENE 89 85488 - 86579 1210 363 aa, chain - ## HITS:1 COG:STM1784 KEGG:ns NR:ns ## COG: STM1784 COG0012 # Protein_GI_number: 16765125 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Salmonella typhimurium LT2 # 1 363 1 363 363 689 94.0 0 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDKLAEIVKP QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD PAEDIDVINTELALSDLDTCERAMHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA LDLTDEDKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDTVREIAAKEGSVVVAVCAAV ESDIAELDDADRDEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT APQAAGKIHTDFEKGFIRAQTISFDDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL FNV >gi|316920095|gb|ADCU01000002.1| GENE 90 86714 - 87304 501 196 aa, chain - ## HITS:1 COG:YPO2011 KEGG:ns NR:ns ## COG: YPO2011 COG0193 # Protein_GI_number: 16122254 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Yersinia pestis # 2 194 3 195 196 298 83.0 3e-81 MTIKLIVGLANPGAEYAQTRHNAGAWFVDALAERNGQSLKEESKFYGYTARLNLAGNDVR LLVPTTFMNLSGKAVAALATFYRIQPDEILVAHDELDLPPGVAKLKLGGGNGGHNGLKDI QSKLGNNPNFYRLRIGIGHPGDKNKVVGFVLGKPLASEQPLIDDAIDEALRCTEVLLKEG IDRAMARMNGFKATPC >gi|316920095|gb|ADCU01000002.1| GENE 91 87619 - 87891 366 90 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_1558 NR:ns ## KEGG: NT01EI_1558 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 88 1 88 92 149 85.0 2e-35 MKRKTAMRLGNVFMGLGLITMVGGVGYSVLAQLPQLNLPQFLSHGAVMSIFVGALLWLVG ARIGGHERVADRYWWVRHFDKRCNRNTRHS >gi|316920095|gb|ADCU01000002.1| GENE 92 88104 - 89051 994 315 aa, chain - ## HITS:1 COG:YPO2013 KEGG:ns NR:ns ## COG: YPO2013 COG0462 # Protein_GI_number: 16122256 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Yersinia pestis # 1 315 1 315 315 587 98.0 1e-168 MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTC APTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSV GVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQQNLENPIVVSPDIGGVVRARAI AKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERG AKRVFAYATHPIFSGNAIDNIKNSVIDEIIVCDTIPLSDEIKALKKVRTLTLSGMLAEAI RRISNEESISAMFEH >gi|316920095|gb|ADCU01000002.1| GENE 93 89359 - 90231 508 290 aa, chain - ## HITS:1 COG:YPO2014 KEGG:ns NR:ns ## COG: YPO2014 COG1947 # Protein_GI_number: 16122257 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Yersinia pestis # 8 288 15 295 299 405 74.0 1e-113 MISTTSIWPAPAKLNLFLYITGRRPDGYHNLQTLFQFLDYSDQLAITPRQDGQLNLLTPI DGVPNDQNLIIRAAKLLQDNLPERFAHCGADIALEKVIPMGGGLGGGSSDAATVLIALNT LWQANLSDNELAKLGLTLGADVPVFVNGFASFAEGVGELLHPAHPEEKWYLVAHPGVNIP TPAIFGDPELKRDSPVRSLQELLRIPYANDCELTARKRFREVEQVISWLLQYAPSRLTGT GACVFAEFDTKSSALQVLSKAPEWIKGFVARGVNTSPLHLVRSEFIESVK >gi|316920095|gb|ADCU01000002.1| GENE 94 90228 - 90848 678 206 aa, chain - ## HITS:1 COG:ECs1714 KEGG:ns NR:ns ## COG: ECs1714 COG3017 # Protein_GI_number: 15830968 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein involved in outer membrane biogenesis # Organism: Escherichia coli O157:H7 # 5 205 7 207 207 269 64.0 2e-72 MQKSKLLKLLPLSCVLLAACNTTQHKGPAGSPTAPQWREHESQVQKIAEYQTRGAFAYLS DKQKVYARFFWQQSAPERYRLLLTNPLGSTEMELNVIPGVVQLTDNKGKRYVSDNADDMI RKLTGMQIPLQSLRLWMLGLPGDATDFTLDSQYRLQDLTYSKDGLTWKVNYLKYDADTQP SLPAQLEITQGDQRIKLKMDNWTLQK >gi|316920095|gb|ADCU01000002.1| GENE 95 91094 - 92371 1143 425 aa, chain + ## HITS:1 COG:YPO2016 KEGG:ns NR:ns ## COG: YPO2016 COG0373 # Protein_GI_number: 16122259 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Yersinia pestis # 1 425 1 420 420 599 80.0 1e-171 MSLLALGINHKTAPVALRERVTFSPETLNHAIESLRQQPLVQAGVVLSTCNRTELYLSME QPEDLQQQDLHKQIVDWLCAYHKLPPDEVNKSLYWYQDNDAVSHLMRVASGLDSLVLGEP QILGQVKKAYTESQREQSMSADLERLFQKTFSVAKRVRTETDIGASAVSVAFAACTLARQ IFESLSQVNVLLVGAGETIELVARHLREHKVRHMMIANRTRERAQVLADEVNAEVITLPE IDERLAEADIIISSTASPLPIIGKGMVERALKSRRNQPMLFVDIAVPRDIEPEVGKLANA YLYSVDDLHSIIQSNLAQRKAAAVQAEHIVQQESANFMAWLRAQGAVETIRDYRSQADQM RAEAEAEALAAIAQGADVESVIHKLAHRLTNRLIHAPTKSLQQAASNGDIEKLQVLRDSL GLDQN >gi|316920095|gb|ADCU01000002.1| GENE 96 92408 - 93490 1151 360 aa, chain + ## HITS:1 COG:STM1776 KEGG:ns NR:ns ## COG: STM1776 COG0216 # Protein_GI_number: 16765117 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Salmonella typhimurium LT2 # 1 360 1 360 360 578 87.0 1e-165 MKPSIVAKLEALQERHEEVQAHLGDAGVIADQDRFRALSREYAQLTDVTRCFQTWQQVQE DLSTAEMMLDDPEMREMAQEEIAEAKNQIADLEQQLQILLLPKDPDDERSCYLEIRAGTG GDEAALFAGDMFRMYSRYAESRRWKIEVMSANEGEHGGYKEIIAKVIGDGAYGRLKFESG GHRVQRVPATESQGRIHTSACTVAVMPEIPEAELPDINPGDLRIDTFRSSGAGGQHVNTT DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEMAKRQQEEASTRRNLLGS GDRSDRNRTYNFPQGRVTDHRINLTIYRLDEVMEGKLDSLIEPIVQEYQADQLASLSEQD >gi|316920095|gb|ADCU01000002.1| GENE 97 93490 - 94332 443 280 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 7 274 23 289 294 175 39 2e-42 MRFDQWLKQAVERLRAGESPKRDAEILLGFVAGKSRSSILAFGETELTPEQVQQLELLLA RRERGEPVAYLLGEREFWSLPLEVSPATLIPRPDTECLVEKALALLPVAACSVLDLGTGT GAIALALASERPDCQFVGVDYSADATALASRNASRLNITNVTFVTGSWYDPVGAQQFALI ASNPPYIDESDPHLSQGDVRFEPASALVAPENGLADLRHIVEYAPDHLIEGGWLIMEHGW QQGEAVRQLLKARGFTDVVTEKDYGNNDRITLGQWHAYSP >gi|316920095|gb|ADCU01000002.1| GENE 98 94386 - 94784 341 132 aa, chain + ## HITS:1 COG:YPO2019 KEGG:ns NR:ns ## COG: YPO2019 COG3094 # Protein_GI_number: 16122262 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 4 132 5 133 133 174 72.0 3e-44 MEAYIGIKHLHLLTVAISIVLFILRFFWKWRNSAMMERRWVKITPHVNDTVLFATGIALV FITHFYPFTPQGTWLTEKLVGVIIYVVLGYVALSKRPRSQKVRCFAFVAALACMYLIIKL AMTKMPLLMGYV >gi|316920095|gb|ADCU01000002.1| GENE 99 94781 - 95590 785 269 aa, chain + ## HITS:1 COG:YPO2020 KEGG:ns NR:ns ## COG: YPO2020 COG2912 # Protein_GI_number: 16122263 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 269 1 269 269 393 75.0 1e-109 MSSIADFEFNRFPLSEGVILVSQTIRRDFPADTVRESLQQLSEQALAHIDAELDQDQKLE QFIDLFFNEWGFGGVGGVYRLSDALWLDKVLSSRQGTPVSLGIVFLHIAHQLDLPLQPVI FPTQLIMRADWLDEEMWLINPLNGETLNEHMLEVWLKGNLGLMASLEDTDFDEAENSMVV RKMLSTLKAALMEEKQIEPALRACEALLEFDPEDPYEIRDRGLIYAQLDCNHIAVSDLSY FVEQCPEDPVSEVIKVQIHSIEQKNIVLH >gi|316920095|gb|ADCU01000002.1| GENE 100 95757 - 96611 959 284 aa, chain + ## HITS:1 COG:ECs1720 KEGG:ns NR:ns ## COG: ECs1720 COG2877 # Protein_GI_number: 15830974 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 283 1 283 284 520 90.0 1e-148 MKQKVVSIGDIKVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK ANRSSIHSYRGPGLEEGMRIFQDIKQAFGVKIITDVHTPEQAQPVADVVDVIQLPAFLAR QTDLVEAMAKTGAVINVKKPQFLSPGQMGNIVDKFEEGGNDKIILCDRGANFGYDNLVVD MLGFGVMKNASKGSPVIFDVTHSLQCRDPFGAASGGRRAQVTELARSGMAIGLAGLFIEA HPDPANARCDGPSALPLDKLEPFLVQMKAIDDLVKSFPELDTSN >gi|316920095|gb|ADCU01000002.1| GENE 101 96718 - 98424 1221 568 aa, chain - ## HITS:1 COG:STM1781 KEGG:ns NR:ns ## COG: STM1781 COG0659 # Protein_GI_number: 16765122 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Salmonella typhimurium LT2 # 9 562 1 551 553 705 74.0 0 MKTHKINGIMPFSALIEACWREPYNAQRFVKDIIAGITVGIIAIPLAMALAIGSGVPPQY GLYTSAVAGIVIALSGGSRFSVSGPTAAFVVILYPVSQQFGLSGLLLATLMSGVFLLLMG MARFGRLIEYIPLSVTLGFTSGIAITIGTMQIKDFFGLHLEHVPESYLMKVAALAQAMPT ISWADTLIGATTLAVLVFWPKLGLRLPGHLPALLAGTAVMGIFALFDTHVATIGSRFSYL LADGTQGQGIPPILPQFVLPWNLPSGTGQPIDLSWKTLTALMPAAFSMAMLGAIESLLCA VVLDGMTGKKHHSNGELIGQGLGNIAAPFFGGITATAAIARSAANVRAGATSPISAVIHS LLVILALLVLAPWLSFLPLAAMASLLLMVAWNMSEAHKVVYLLRRAPKDDIIVMLMCMSL TVLFDMVIAITVGIVLASLLFMRRIARMTRLSVLSESVETSTLMLRVSGPLFFAAAERIF SELLEQSENYNTIVMQWDAVPVLDAGGLNAFQRFVDALPEGKQLVITDIPFQPLKTFARA RIAPIAGKLAFFSTLPEAVKHLNDSASL >gi|316920095|gb|ADCU01000002.1| GENE 102 99430 - 100044 587 204 aa, chain - ## HITS:1 COG:ECs4377 KEGG:ns NR:ns ## COG: ECs4377 COG3065 # Protein_GI_number: 15833631 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Starvation-inducible outer membrane lipoprotein # Organism: Escherichia coli O157:H7 # 10 203 10 194 199 202 52.0 4e-52 MLITSSSLISKCKKTIGIITLSGVFILSGCSSIPKSIEGNNSPILQKNFTSVHNSPNLYQ GQQVRFGGTVVNVINRDNATLLEIAVLPLDSSAKPEINQPYQGRIIAKSDKFLDPVNFRN HLVTVLGTLTGSQKGTVGKTPYNFVTMNIEGYQVWHLTETIQPIAEWDYGFGPYWQAGQW NNGFGPDWGWYAADEGQVVTTVTQ >gi|316920095|gb|ADCU01000002.1| GENE 103 100261 - 100737 351 158 aa, chain - ## HITS:1 COG:YPO2534 KEGG:ns NR:ns ## COG: YPO2534 COG4702 # Protein_GI_number: 16122752 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 157 1 157 171 155 49.0 2e-38 MSSEDELAQLAAEEASLQFSAFNAETAWALGTALKQESERRGVAVSIDIQLAGHTLFHYA MRGTSPDNAEWIRRKRNVVSRFHKSSYAIGLRLQLRNATLEERYGLSLNDYAAHGGCFPL TIKDTGCVGTITVSGAPQLEDHQIVTTVISRFLGLTSC >gi|316920095|gb|ADCU01000002.1| GENE 104 100802 - 100948 59 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQKCTGVSQANIAVNPRPCPLKAHLILTPFLFSETAFCFIPRMKSHEL >gi|316920095|gb|ADCU01000002.1| GENE 105 101451 - 101876 519 141 aa, chain + ## HITS:1 COG:RSp1107 KEGG:ns NR:ns ## COG: RSp1107 COG1764 # Protein_GI_number: 17549328 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Ralstonia solanacearum # 1 141 1 141 141 193 65.0 7e-50 MSIEKVVYRAKAKATGGRDGRATSSDGVLDVKLGVPKEMGGAGGAVTNPEQLFAAGYSAC FLGALKFVASKEKVKVPAEAQIESTVGIGEIPGGFGIEVQLDISLPGIERSVAEDLVKKA HQVCPYSNATRGNIDVKLNVI >gi|316920095|gb|ADCU01000002.1| GENE 106 102200 - 103396 871 398 aa, chain - ## HITS:1 COG:VC1664 KEGG:ns NR:ns ## COG: VC1664 COG4134 # Protein_GI_number: 15641668 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Vibrio cholerae # 34 398 19 379 382 425 58.0 1e-119 MRLRIIVPTLLAGLCLLAPMANAELSTIESPTPSADWQHTEQQAKGQTVYFNAWGGSTQV NNYLDWATKELQARYGITLKQVKVADIAETVNRIQAEKTAGNTQNGSADLLWVNGENFNV LKQNGLLYGPFAASLPNWRWVDKKLPVTQDFTVPTDGFEAPWGVGQLVFIHDMHTMPNPP ADLSALLNYAKVHPGRLSYPRPPQFHGSSFLKTALIGLTSGVALDKPVVPATFQRDTAPL WAYLDALHPYLWRQGKVFPTSDAQMIQMLNDNELDIAITFNPGIAPAAIAAGSLPPDAKT YALNQGALTNVHFLAIPFNARAKPAAQVVINFLMSPEAQARKADGAHWGDPSILDVAHLP AGQEALFKDRKTLFNAIAEPHPSWQVALDAEWQKRYGH >gi|316920095|gb|ADCU01000002.1| GENE 107 103543 - 103755 66 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MALRCEDDGVVELTVFPLQFNVVHTLPERCQESDSAGLLVIIPLYFVQASSSFSGINLQN TSVNVVIPSI >gi|316920095|gb|ADCU01000002.1| GENE 108 103715 - 105190 1485 491 aa, chain + ## HITS:1 COG:STM1452 KEGG:ns NR:ns ## COG: STM1452 COG3104 # Protein_GI_number: 16764800 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Salmonella typhimurium LT2 # 21 490 26 492 501 196 29.0 9e-50 MSSTTPSSSHRSAIPVGSGALFFIQTFSTLGFAVLYSTLVLYATKRLGFSESDANAMMGV FGAFNYGLHLFGGYLGGRCLSNRNLFVLGMVLQVIGCYMIAEMGVSGLYWGLAMFLTGSG LNVTCLNMMLTQRFAPDDDRREGAFLWNYAGMNLGFFAGFAVAGYFQLSENYRALFLFAT IGNAVAILVTLSRWQILADINTPLKQASKRAFYLRMLVGLAVLVALVPIIRVLLTHADFS SYFVVVLGILIFIMLCIMTLRQREADERRRMVAYLILAAGSLVFWSLYQLAPMGLMLFSE HNIDLNVYGLRVAPQWIQNINTVVIVVGGPLMALLFKRLRERGFNIDIPLQFCASLFCMG LGMLVLPLGIQLAGGDGLVAFKWIALSYVLQSFGELMISPIGYAMIGKLAPARHQGLMMG CWMMVTGVASVLAGYVSSLMPQNSGSTPLETNPGYSSVFNALGWGSVATGVVLMLLIPLL RRLINQQRQAI >gi|316920095|gb|ADCU01000002.1| GENE 109 105242 - 106183 968 313 aa, chain + ## HITS:1 COG:ycdW KEGG:ns NR:ns ## COG: ycdW COG0111 # Protein_GI_number: 16128996 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli K12 # 1 313 14 325 325 359 54.0 3e-99 MNIIYYHPFFNAQLWLDGMRKRLPEANIRQWQPGDDKPADYALVWQPPFEMLASRQDLRG VFALGAGVDAILAQERAHPGTLPQGVPLVRLEDTGMALQMEEYAAAVALRYFRRFDEYEQ QQREGVWKYLAPHDASRFVVGVLGAGVLGGKVAERLASFGLQVRCWSRTEKHYSGVKSFY GKGQFASFLQGTQLLINLLPNTPETVGILDRSLFAQLNAGAYIINLARGAHMKEDDLLAA LESGQVAAATLDVFAKEPLAPEHPFWKHPRVTITPHIAAITLPEVAMDYVAQNIRAIEAG KTPEGVVNMDLGY >gi|316920095|gb|ADCU01000002.1| GENE 110 106336 - 106902 523 188 aa, chain + ## HITS:1 COG:YPO2037 KEGG:ns NR:ns ## COG: YPO2037 COG1387 # Protein_GI_number: 16122276 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Yersinia pestis # 1 185 1 185 245 300 77.0 7e-82 MYPVDLHMHTVASTHAYSTLHDYIAQAKKCGIKLFAITDHGPDMADAPHYWHFMNMRVWP RVVDDIAILRGIESNIKNIQGEIDCTGRMLEEMDLIIAGFHEPVFAPRDRDSHTQAMIAT IENGDADIISHPGNPKFPIDIRAVAEAAARHNVALELNNSSFTHSRIGSEDNCRAVAEAV RDAGAICP >gi|316920095|gb|ADCU01000002.1| GENE 111 107152 - 107730 582 192 aa, chain + ## HITS:1 COG:YPO2038 KEGG:ns NR:ns ## COG: YPO2038 COG3381 # Protein_GI_number: 16122277 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Yersinia pestis # 1 181 1 180 186 233 66.0 2e-61 MNDFSIICRLLGSLFSRQPQDALLTPVFDLMAQGKLQQFWPIEQDALLTRLQAAAKDRAA LSADYAAMFIGDEASVDLHRSDYQENASEQDVRDFLTQRGMPLGEQASDSFGQLLLAASW LEDQSAEDEVQAQITLFDEYLLPWCGKFLGKVEAHSTTAFYRTLAELTREAVQAMWDELS ESVDSAEENDAE >gi|316920095|gb|ADCU01000002.1| GENE 112 107825 - 108388 588 187 aa, chain - ## HITS:1 COG:no KEGG:ETAE_1421 NR:ns ## KEGG: ETAE_1421 # Name: not_defined # Def: predicted lipoprotein # Organism: E.tarda # Pathway: not_defined # 1 187 34 220 220 245 60.0 5e-64 MKKVIYLAGIVAAGLVLSACNKLTQYTITEQDMNQYLQKYNNFQKQIGISGLVNADITVD QLSSQIGRTDPNKITLTGHAKVNISSILGPQTSDMQITLQAQPVYNAEQGAIFLRDMELT DYTVKPEKMSGVMKAVVPYLNQSLKTYFNEKAVYTLDPNKSEKEALAKKLAKGIEIKPGE VIIPFTD >gi|316920095|gb|ADCU01000002.1| GENE 113 108767 - 109972 1145 401 aa, chain - ## HITS:1 COG:YPO2040 KEGG:ns NR:ns ## COG: YPO2040 COG0477 # Protein_GI_number: 16122279 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 398 1 398 401 587 84.0 1e-167 MSLVSQARSLGKYFLLLDNLLVVLGFFVVFPLISIRFVDQLGWAAVVVGAALGLRQLIQQ GLGIFGGAIADRFGAKPMIVIGMLLRAAGFASMAVASEPWILWLSCALSALGGTLFDPPR TALVIKLTRPHERSRFYSLLMMQDSAGAVVGALIGSWLLQYDFHYVCWVGAAIFVLAALC NAWLLPAYRISTVRAPIKEGMMRVIRDRRFLLYVLTLTGYYMLAVQVMLMLPIMVNEIAG TPTAVKWMYAIEATLSLTLLYPIARWSEKHFRLETRLMFGLLIMTISMFPVGLATEIRTL FILICCFYFGSIIAEPARETLSASLADPRARGSYMGFSRLGLALGGAIGYTGGGWMYDTG QALGTPELPWFLLGVVGLMTLALLYWQFNQRRIAPAVLGGG >gi|316920095|gb|ADCU01000002.1| GENE 114 110266 - 110850 834 194 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15801183|ref|NP_287200.1| ribosomal-protein-S5-alanine N-acetyltransferase [Escherichia coli O157:H7 EDL933] # 1 194 1 194 194 325 77 9e-88 MFGYHNSGPKVRLITDRMVVRLVHDRDAYRLADYYAENREFLKPWEPVRDESHCYPSGWQ ARLGLINELQKQGSAYYFLLLDQNENEVRGVANFSNVLRGSFHACYLGYSLGEKWQGQGL MYEGAQAAIRYMFRQQRMHRIMANYMPHNQRSGALLKRMGFEKEGYAKDYLLINGKWQDH VLTALINQEWTAPR >gi|316920095|gb|ADCU01000002.1| GENE 115 110891 - 111547 674 218 aa, chain + ## HITS:1 COG:ECs1445 KEGG:ns NR:ns ## COG: ECs1445 COG3132 # Protein_GI_number: 15830699 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 218 1 215 215 266 66.0 3e-71 MKNPLSPLEARVIGCFLEKQVTTPDQYPLSLNGLTTACNQKTNRDPVLELSESDVQSTLD MLMKKHQVRSLSIPGSRVMKYEHRFCNSEFGNLKFSEAEVAVVCCLLLRGPQTPGELRTR TNRLYEFSDVTQVEQVLNELAAREDGPFVVRLQREAGKRESRYAHLFSGEVENVATSATD NLMATLGDDSLAERVASLEAEVVELKARVDSLLAHLAD >gi|316920095|gb|ADCU01000002.1| GENE 116 111558 - 112469 739 303 aa, chain + ## HITS:1 COG:YPO2042_2 KEGG:ns NR:ns ## COG: YPO2042_2 COG0673 # Protein_GI_number: 16122281 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Yersinia pestis # 1 303 1 303 303 370 61.0 1e-102 MTKLRIGVVGLGGIAQKAYLPIFSQAERWELVGGFSPTRSKAQAVCDRYRMQAFARLDEL AQQCDALFVHSSTNTHFEVVRDLLQRGKHVYVDKPLAETIAQAEQLIALAEQQNCRLMVG FNRRFAPRYMQIKQQAHNVASIRMDKHRHQNIGPKDVRFTLLDDYLHVIDTALWMSGRNL KLKSGILHTNDVGQMIYAEHHFSAGQTQITTSMHRAAGSQREVMQVVTSGAIYDAQDLRS LSIERDTVLSESPTPSWQSTLEQRGFVGAVNHFIDCVENQTAPLTSGEQAIAAQRIVESL LSQ >gi|316920095|gb|ADCU01000002.1| GENE 117 112613 - 114151 1041 512 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 [Haemophilus influenzae 22.1-21] # 3 502 5 516 524 405 41 1e-112 MNLLKSLAAVSSMTMFSRVLGFARDALVARIFGAGVATDAFFVAFKLPNLLRRIFAEGAF SQAFVPILAEYKSQQGEEATRTFVAYVSGMLTLVLALVTVLGMIAAPWVIWATSPGFLRD PDKFELTASLLRITFPYILLISLASLAGAVLNTWNRFSVPAFAPTFLNLSMIGFSLFAAP YFNPPIMALAWAVTVGGVLQLAYQLPHLKKIGMLVLPRINLRDAGVWRVMRLMGPAIIGV SVSQISLIINTIFASFLVSGSVSWMYYADRMMEFPSGVLGVALGTILLPSLAKSVSSGRL DDYSRLMDWGLRLCFVLALPSTVALGILSKPLIASLFQYGQFTAFDTEMTQRALIAYSVG LMGIILVKVLAPGFYSHQNIRTPVKIAIASLIMTQLMNLAFIGPFKHAGLSLSIGLAACL NAGLLYWQLRKQKMYIPQTGWVLFLTKLVIAVVVMAAVLIGMMWFMPAWDTGNMLMRILR LLLVVVVGAGSYFAALALLGFRVRDFTRNVVV >gi|316920095|gb|ADCU01000002.1| GENE 118 114369 - 114956 376 195 aa, chain + ## HITS:1 COG:no KEGG:PFL_1400 NR:ns ## KEGG: PFL_1400 # Name: not_defined # Def: hypothetical protein # Organism: P.fluorescens # Pathway: not_defined # 5 181 60 236 245 143 42.0 3e-33 MVMLVNQPEERDRDVYDYDVDVVVTDTQSGKILARNYHPHAITNDAIALSHVTIDTARYQ LTPELRAFGVRFNSHGSSRVNPIYYSNLNLYVLKDRALPLMVNQLTVEDFGAEWDGDCAG YSDKTTRTLSISKTSTSGFADLSVHEVSTHTESAKRNNDCEDTAVSKMQANYTLHFNGIN YSVDKKQRLFDESQF >gi|316920095|gb|ADCU01000002.1| GENE 119 115044 - 116774 1891 576 aa, chain - ## HITS:1 COG:YPO2046 KEGG:ns NR:ns ## COG: YPO2046 COG0018 # Protein_GI_number: 16122285 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Yersinia pestis # 1 576 1 576 576 974 83.0 0 MNIQALLSDKVTQALVAAGAPANSEALVRQSAKAQFGDYQANGVMGAAKKLGIAPRQLAE QVLTHLELDGIASNVEIAGPGFINIFLDPAWLAKQVEMALADERLGVAAVKPQTIVVDYS APNVAKEMHVGHLRSTIIGDASVRTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKMQNEH ANEMDLSDLEAFYREAKKHYDEDAEFAERARAYVVKLQGGDEYCREMWRKLVDITMSQNQ KNYQRLNVTLTKDDVMGESLYNSMLPGIVADLKAKGLAVESEGATVVFLDEYKNKEGEPM GVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPD SVSLEHHMFGMMLGKDGKPFKTRSGGTIKLSDLLDEAVERAGKLIAEKNPDLSGDELAKL VEVVGIGAVKYADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVSSIFKRAGIDEQS LSGNIVLTEDREKALAARLIQFEETITQVAREGTPHVMCTYLYDLAGLFSSFYEACPILT AESEEQRNSRLQLAALTARTLKTGLDTLGIETVERM >gi|316920095|gb|ADCU01000002.1| GENE 120 117009 - 117572 539 187 aa, chain + ## HITS:1 COG:yecM KEGG:ns NR:ns ## COG: yecM COG3102 # Protein_GI_number: 16129827 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 7 186 9 188 190 258 69.0 3e-69 MTFLADIDALHDLEADLVRFTALLQIFADKLELDLSAFSADHISLRCHQNATAERWRSGF ETCSALLSENMINGRPICLFDLHQPLSVGPWQIDCVELPYPGEKRYPHEGWEHVELVIAG DPETLHPRALELLSDSALLAPGIKLKFSSPKGESERLPNPTLAVTDGEITIKFHPYSIRE IVASEQQ >gi|316920095|gb|ADCU01000002.1| GENE 121 117655 - 118797 882 380 aa, chain - ## HITS:1 COG:YPO3006 KEGG:ns NR:ns ## COG: YPO3006 COG1168 # Protein_GI_number: 16123185 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Yersinia pestis # 1 380 1 392 393 265 35.0 1e-70 MTFNFDEWVDRSHSDSQKWNKYANKDIIPMWVADTDFRSPPAVIDALQKRVAEGVFGYGD PSQELVQIFIKRMRDLYQWDVKPEWLVFLPGMVCGLNLSVRAFTDPQQHTLAPFPIYPPF VKSSRFAHRQQLQIPVKLNNQRWVMDLASAEQQLTGNEKLLMLCNPHNPGGTVYTREELE EQLAFAQRHNLLICSDEIHCDLLLEPGVKHVPIASLNDDAAQRSITLMAPSKTYNIAGLG ATIAIIPNKNLRDRFITERTGVVPSVDILAYVAAEAAYRDGQEWLNAQLDYLRGNRDLLV ARINAMKGLSTVNLAATYLAWVDASALPVDNPHAFFEQAGVGLSPGADFGNAKFVRINFG CNRGLLTKALDRMENAINAL >gi|316920095|gb|ADCU01000002.1| GENE 122 119070 - 119825 749 251 aa, chain + ## HITS:1 COG:YPO2048 KEGG:ns NR:ns ## COG: YPO2048 COG3142 # Protein_GI_number: 16122287 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Yersinia pestis # 2 249 3 252 254 364 67.0 1e-101 MKLEICCFGAECALTAERAGADRIELCASQLDGGLTPSYGTLQWVRDKVSIPVHPIIRPR GGDFCYSYTDFEVMKNDMAMIRDMGFPGAVVGLLDAEGHIDLPRMRELMQLSGNMAITFH RAFDMCVSPMVALSQLTDLGIARILTSGQQQSAEVGLPLLKELLNATQGPVIMAGAGVRL TNLHKFQEIGLTEVHSSAGHMVPSEMRYRKAGVTMCSDSEFDEFTHYCVDGEVVEAMKTA LSLGEPFPRSA >gi|316920095|gb|ADCU01000002.1| GENE 123 119939 - 120910 962 323 aa, chain - ## HITS:1 COG:YPO2049 KEGG:ns NR:ns ## COG: YPO2049 COG0500 # Protein_GI_number: 16122288 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Yersinia pestis # 1 323 1 323 323 565 82.0 1e-161 MIEFGNFYQRIANSPLSHWLEVLPAQLAAWQRESLHGKFKDWFNAVDRLPEMTPHSLDLL NGVRAQAEPELGPGQKEGIEKMLRALMPWRKGPFDLYGIHINTEWRSDWKWERVLPHISP LEGRTILDVGCGSGYHLWRMIGAGAHFAVGIDPMQLFLCQFEAVRKLLGGDQRAHLLPLG IEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVKDGELVLETIVIEGDENQVLVPG DRYAQMRNVYFIPSAKALVKWLEKCGFVDVRIVDSCVTSLEEQRRTDWMISESLAEFLDP NDQSKTVEGYPAPIRAVIVARKP >gi|316920095|gb|ADCU01000002.1| GENE 124 120907 - 121749 632 280 aa, chain - ## HITS:1 COG:YPO2050 KEGG:ns NR:ns ## COG: YPO2050 COG0500 # Protein_GI_number: 16122289 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Yersinia pestis # 13 276 1 263 267 441 79.0 1e-124 MRPLLKPHASLLMSNRDTLSDNTFDAASGGNDGSADRDTLFSAPIAKLGDWTFDERVAEV FPDMIQRSVPGYSNIISMIGMLAERFAQPNTKVYDLGCSLGAATLSMRRNIRAQGCQIVA VDNSPAMVERCRRHIDAFRAQTPVEVIEADIQNIAIENASMVVLNFTLQFLAPEERQSLL NKIYQGLLPGGVLVLSEKFNFEDKTLGELLFNMHHDFKRANGYSELEISQKRSMLENVML TDSVETHKSRLNQAGFEHAEIWFQCFNFGSLLAVKGDVVA >gi|316920095|gb|ADCU01000002.1| GENE 125 122001 - 123362 1163 453 aa, chain + ## HITS:1 COG:YPO1743 KEGG:ns NR:ns ## COG: YPO1743 COG1113 # Protein_GI_number: 16122000 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 5 450 4 449 457 693 83.0 0 MGDLQQQEETLQRGLKNRHIQLIALGGAVGTGLFLGIAQTIKMAGPSVLLGYAIGGFIAF LIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFLAGWNYWVMFVLVGMAELTAVGIYIQY WWPDIPTWMSAAGFFVIINIINLVNVRVYGETEFWFAIIKVGAIIGMIVFGAWMLASGSG GPQASITNLWTQGGFLPNGWHGLIMAMAVIMFSFGGLELVGITAAEASEPRKSIPKATNQ VVYRILIFYIGSLTVLLSLYPWQNVVQGGSPFVMIFHALDSNWVATALNIVVLTAALSVY NSCVYSNSRMLFGLAKQGNAPAVLTKVNRRGVPILSIGLSALTTSAVVLINYLMPGEAFE LLMALVVSTLVINWVMICMAHLKFKAAKNQQGVTTAFKALWYPYGNYLCLAFLALILVIM YMTPGIRISVILLPIWVAVLWVGFLLSRKKAKI >gi|316920095|gb|ADCU01000002.1| GENE 126 123972 - 124367 324 131 aa, chain - ## HITS:1 COG:YPO2051 KEGG:ns NR:ns ## COG: YPO2051 COG3788 # Protein_GI_number: 16122290 # Func_class: R General function prediction only # Function: Uncharacterized relative of glutathione S-transferase, MAPEG superfamily # Organism: Yersinia pestis # 1 130 1 130 131 197 83.0 5e-51 MVSALYVVLGALLLIKLSLNVVKLRMQYRVAYGDGGFYELQTAIRVHGNAVEYIPIAAIL LVMMEMNGSLIWMIHVCGILLIAGRLMHSYGLRHREIRWRRSGMSATYISLVLMVLANLF YLPWDQMFTLD >gi|316920095|gb|ADCU01000002.1| GENE 127 124507 - 125325 441 272 aa, chain - ## HITS:1 COG:YPO2052 KEGG:ns NR:ns ## COG: YPO2052 COG1801 # Protein_GI_number: 16122291 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 2 272 1 271 271 376 68.0 1e-104 MMYIGLPQWQHAAWHKIGLRDLADYSRYFNCVEGNTTFYALPKPEIARRWRDMTDDNFRF CFKFPSIISHQAALIQCTEQLSAFYSSIQPVHSRIGQLWLQLPAAFAPQHLPRLWQFLDA LPKEFTYGVEVRHPDFFAKGEAERAFNRGLHERQINRVLLDSRPVHHAKPLTPAVRDAQQ KKPKLPVHAVLTADNPLVRFVGGDVLEDNRLWLQQWEKKLADWSHSHTPYLFIHTPDCTD APQQARALWPLLSQKIKHLPPQPDWPLQTSLF >gi|316920095|gb|ADCU01000002.1| GENE 128 125740 - 125943 141 67 aa, chain + ## HITS:1 COG:RSc0464 KEGG:ns NR:ns ## COG: RSc0464 COG2331 # Protein_GI_number: 17545183 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 62 1 62 112 86 64.0 1e-17 MPIYEYACSDCNHQLEKLQKMSDAPLVDCPACGKPTLKKRVSAAGFQLKGTGWYATDFKP KSVKSEN >gi|316920095|gb|ADCU01000002.1| GENE 129 126052 - 127842 1936 596 aa, chain + ## HITS:1 COG:YPO2053 KEGG:ns NR:ns ## COG: YPO2053 COG0173 # Protein_GI_number: 16122292 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Yersinia pestis # 1 591 1 591 598 1053 86.0 0 MRTNYCGQLNLSHEGQEVTLCGWVHRRRDLGGLIFIDLRDREGVVQVFFDPDHQEAFQQA SELRNEFCVQITGTVRARPDSQKNKEMSTGEVEVFGHALTIINRSEPLPLDFNQTNSEEN RLKYRYLDLRRPEMAQRLKTRARITAFVRRFMDNHGFLDIETPMLTKATPEGARDYLVPS RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMS AEQVREVMEELARSLWQEIKGVDLGKFPVMTFAEAMRRYGSDKPDLRNPLELVDVADLVK DVDFKVFSGPANDPKGRVIALRVPGGAHLTRKIIDEYGQFVSIYGAKGLAWMKVNDRAAG MEGVQSPIAKFLNADVLESILERTGAQSEDILFFGADTSKIATDAMGALRLKVGRELKLT NEDSWAPLWVIDFPMFEDDGEGGLAAMHHPFTAPRDISPAELKAHPVGAIANAYDMVMNG YEVGGGSVRIHNGEMQETVFGILGITEQEQRDKFGFLLDALKYGTPPHAGLAFGLDRLVM LLTGTDNIRDVIAFPKTTAAADPLTDAPSFANPASLQELSISVVAKKGSADEAEKA >gi|316920095|gb|ADCU01000002.1| GENE 130 127842 - 128276 333 144 aa, chain + ## HITS:1 COG:YPO2054 KEGG:ns NR:ns ## COG: YPO2054 COG0494 # Protein_GI_number: 16122293 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Yersinia pestis # 1 143 1 143 147 235 81.0 2e-62 MAYKRPESILVVIYARQSGRVLMLQRRDDPDFWQSVTGSLEEGESAPHAAQREVKEEVGI DITGENLLLTDCQHCVEFELFAHLRHRYAPGVTRNLEHWFCLALPSEREIPLTEHLAYQW LDVEQAAQLTKSWSNRQAIEELVH >gi|316920095|gb|ADCU01000002.1| GENE 131 128395 - 129141 779 248 aa, chain + ## HITS:1 COG:YPO2055 KEGG:ns NR:ns ## COG: YPO2055 COG0217 # Protein_GI_number: 16122294 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 247 1 247 247 422 91.0 1e-118 MAGHSKWANTKHRKAAQDSKRGKIFTKIIRELVTAAKLGGGDPGANPRLRAAIDKALSNN MTRDTLNRAIARGVGGDDDTNMETIIYEGYGPGGSAIMVECLSDNRNRTVAEVRHAFTKT GGNLGTDGSVSYLFTKKGVISYAPGLDEDTVMDAALEAGADDVVTYDDGAIDVFTPWETF GEVKDALDAAGLVAESAEVSMIPSTKAEMDAETAPKLMRLIDMLEDCDDVQEVYHNGEVS DEVAATLE >gi|316920095|gb|ADCU01000002.1| GENE 132 129138 - 129659 378 173 aa, chain + ## HITS:1 COG:STM1898 KEGG:ns NR:ns ## COG: STM1898 COG0817 # Protein_GI_number: 16765240 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Salmonella typhimurium LT2 # 1 173 1 173 173 271 86.0 6e-73 MSIILGIDPGSRITGYGVIRQVGRKLEYLGSGCIRTSVDDLPTRLKLVYAGVSEIITQFQ PDIFAIEQVFMAKNADSALKLGQARGAAIVAAVNVDLPVFEYAARQIKQTVVGTGAAEKA QVQHMVRSLLKLSANPQADAADALAVAITHCHVSQNALRASPTRLNLARGRLK >gi|316920095|gb|ADCU01000002.1| GENE 133 129760 - 130374 668 204 aa, chain + ## HITS:1 COG:YPO2057 KEGG:ns NR:ns ## COG: YPO2057 COG0632 # Protein_GI_number: 16122296 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Yersinia pestis # 1 204 1 204 204 333 84.0 2e-91 MIGRLRGIILEKQPPEVLLEANGVGYEVHMPMTCFYELPELGQEVIIFTHFVVREDAQLL YGFNNKQERALFRELIKVNGVGPKLALAILSGMSAQQFVTAIEREEVSTLVKLPGVGKKT AERLVVEMKDRFKGLTGDLFNNHSDLPVPAAKKPASEIDAEGEAVSALIALGYKPQEASR MISKIAKPDADSETLIRDALRAAL >gi|316920095|gb|ADCU01000002.1| GENE 134 130397 - 131404 1062 335 aa, chain + ## HITS:1 COG:YPO2058 KEGG:ns NR:ns ## COG: YPO2058 COG2255 # Protein_GI_number: 16122297 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Yersinia pestis # 1 334 1 334 334 581 88.0 1e-166 MIEADRLITAEVQSEEEIIDRAIRPKSLSEYVGQPQVRGQMEIFIKAAKLRGDALDHLLI FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP VVEEILYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLVGATTRAGSLTSPLRDRFGIVQR LEFYQVADLQHIVGRSAQCLGLSLTEEGAHEVARRSRGTPRIANRLLRRVRDYAEVCADG NIDADVATQALNMLDVDAEGFDYMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV LEPYLIQQGFLQRTPRGRMATNHAYKHFGMTREEP >gi|316920095|gb|ADCU01000002.1| GENE 135 131474 - 132259 832 261 aa, chain - ## HITS:1 COG:STM1893 KEGG:ns NR:ns ## COG: STM1893 COG1108 # Protein_GI_number: 16765235 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 260 1 260 261 336 81.0 2e-92 MIELLLPGWIAGALLALTAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLNVNPFFAV IVVTLLLAIGLVWLERRPTLGVDTLLGIMAHSALSLGLVVVALMSNVRVDLMAYLFGDLL SVTYNDIVMIAIGVAIVLGILWWQWRPLLSVTISPELAHVDGVNLERVRMILMLVTALTI GLAMKFVGALIITSLLIIPAATARRFSRTPEQMASIAVIIGILAVTGGLTFSAFYDTPAG PSVVLCATAMFILSLSKKQSV >gi|316920095|gb|ADCU01000002.1| GENE 136 132256 - 133047 193 263 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 15 223 1 231 245 79 27 2e-13 MSSQNNSSLQNNRSLVSLKDITVSFGSRNVLSHISLDLKPGHILTLLGPNGAGKSTLVRV VLGLVKPTSGSITTANNLTIGYVPQKLHLDATLPLTVSRFMRLRPGVRKDDVLPALKRVH AAHLLNQPMQKLSGGENQRVLLARALLNKPDLLVLDEPTAGVDVNGQLALYDLINQLRQE LNCSVLMVSHDLHLVMAKTDEVLCLNQHICCSGTPEVVSLHPEFIAMFGNRGAEQLAIYR HHHNHRHDLQGKIILKSHGSQQS >gi|316920095|gb|ADCU01000002.1| GENE 137 133121 - 134131 568 336 aa, chain + ## HITS:1 COG:YPO2061 KEGG:ns NR:ns ## COG: YPO2061 COG4531 # Protein_GI_number: 16122300 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Zn2+ transport system, periplasmic component/surface adhesin # Organism: Yersinia pestis # 1 333 1 317 318 414 66.0 1e-115 MIHKKAWFKRTIIAAALVTSAGISCAQAAVLTSIRPLGFIASAIADGVTETEVLLPDGAS PHDYALKPSDIKRLREADLVVWVGPEMEAFLTKPTQQLENNKNLMLSGLPAVHSLLIAGD DDHDHDHKSVEPESNTEKSESSVAHNVTNGAETASEEHHDHDHGQYNLHIWLSPAIAKQI AIAIHDKLLLQSPQNKDKLDVNLRKFEEQLEQTQKNVGMMLRPVQGKGYFVFHDAYGYFE NTFGLTPLGHFTVNPEIQPGAQRLHQIRTQLVEQKAVCVFAEPQFRPAVISAVAQGTKVR QGTLDPLGSEIALGADSYMRFLTQLSQQYLSCLNGD >gi|316920095|gb|ADCU01000002.1| GENE 138 134145 - 135470 987 441 aa, chain + ## HITS:1 COG:YPO2062 KEGG:ns NR:ns ## COG: YPO2062 COG0739 # Protein_GI_number: 16122301 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Yersinia pestis # 22 441 1 417 417 663 76.0 0 MQQIARSIALAYNNLPRPHRVMLGSLTVITLAVSIWRPFVYQPNIDSDSATAKIIPLDNQ QLRTLVPEASEPLDQPAPEDEVPTDELDDKADNDSGTHDYVVSTGDTLGSILTQFGIDMS EVSALAKQNPALRNLKIGQTLSWVLNDAGELQQLTWEVNRRETRTYNLVNGNFKEAVESQ QGEWKNKVVTGTLNGSFVNSARAAGLSRSEVNAVIKALQWQMDFRKLQKGDQFAVLMSRE ELNGRSEQSQLLGVRMRTGGKDYYAVRADDGKFYDRQGSGLAKGFMRFPTTKQFRVSSNF NPRRVNPVTGRVAPHRGVDFAMPVGTPVLAVGDGEVVIAKRSGAAGNYVVIRHGRQYTTR FMHLKKILVKPGQKVKRGDRIALSGNTGRSTGPHLHYEFWLNNQAVNPLTAQLPRSDGLS GKDRREYLAQVRQVVPQLQLD >gi|316920095|gb|ADCU01000002.1| GENE 139 135641 - 136603 768 320 aa, chain + ## HITS:1 COG:msbB KEGG:ns NR:ns ## COG: msbB COG1560 # Protein_GI_number: 16129808 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli K12 # 5 320 4 319 323 465 68.0 1e-131 MEKEQRSNVEFIPQFEKSFLLPKYWGAWLGVGTMVAMAYLPVRVRDPILATVGRWAGKLA GGARRRARINLLYCFPELSEAQREEIIDRMFERAGQSMFLMAELTLRDPQRVLKRTRWHG MEHIEALRERGGNAIFLVPHGWAVDIPAMLLAAQGQPMAAMFHNQKNKMIDWLWNTCRRR FGGRMHARDDGIKPFISSVRHGYWGYYLPDQDHGAEHSEFVDFFATYKATLPAIGRLMKL CRAQVIPLFPVYDGKTSTLDIYIRPPMDDIAEMNEHDMARRMNEEVELLMGPHPEQYTWI LKLLKTRKPGEIEPYKRKDL >gi|316920095|gb|ADCU01000002.1| GENE 140 136675 - 138117 1562 480 aa, chain - ## HITS:1 COG:pykA KEGG:ns NR:ns ## COG: pykA COG0469 # Protein_GI_number: 16129807 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Escherichia coli K12 # 1 480 1 480 480 803 91.0 0 MSRRLRRTKIVTTLGPATDRDNNLEKIISAGANVVRLNFSHGSAEDHLARANKVREIAAK LGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDADLTTGEGDKEKVGIDYKRLPED VVPGDILLLDDGRVQLKVLEVKGSKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDIA DIATAAKISVDYLAVSFPRTGEDINYARRLARDAGCDAKIVAKVERAEAVCSEEAMDDII LASDVVMVARGDLGVEIGDPELVGIQKQLIRRARKLNRTVITATQMMESMITNPMPTRAE VMDVANAVLDGTDAVMLSAETAAGQYPAETVAAMARVCLGAEKIPSINVSKHRLDVQFDN IEEAIAMSSMYAANHLKGVTAIIAMTESGRTALMMSRISSGLPIFAMSHRERTLNLTALY RGVTPVYFDSTSDGVAAAQDAANLLRDKGFLVSGDLVIVTQGDVMGTVGSTNTSRILRVE >gi|316920095|gb|ADCU01000002.1| GENE 141 138383 - 139252 554 289 aa, chain - ## HITS:1 COG:YPO2065 KEGG:ns NR:ns ## COG: YPO2065 COG1737 # Protein_GI_number: 16122304 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 280 1 280 289 468 89.0 1e-132 MNTLDKIQANLDQLSKSERKVAEVILAAPQTAIHSSIATLAKMADVSEPTVNRFCRRMET KGFPDFKLHLAQSLANGTPYVNRNVEETDSVDAYTSKIFESAMASLEMAKNNLDMSAVNR AVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVVYFDDIVMQRMSCMNSNEGDVVV LISHTGRTKSLVEMAHLARENDATVIAITSRDTPLALEATLPLLLDVPEDTDVYMPMVSR IAQLTLIDALATGFTLRRGAKFRDNLKRVKEALKESRFDKGLALPHHFD >gi|316920095|gb|ADCU01000002.1| GENE 142 139732 - 141207 1488 491 aa, chain + ## HITS:1 COG:YPO2066 KEGG:ns NR:ns ## COG: YPO2066 COG0364 # Protein_GI_number: 16122305 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Yersinia pestis # 1 491 1 494 494 920 87.0 0 MAVTSTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGHIHPDTRIIGVGRAEWDKDAYTK VVREALDTFLKEKVDEELWATLSARLDFCNLDVNDTQHFKNLAKMLDQKKRVTINYFAMP PSTFGAICQGLGASGLNKEPSRIVMEKPLGTDLESSRAINNQVAEFFDESQVYRIDHYLG KETVLNLLALRFANSLFANNWDNSMIDHVQITVAEEVGIEGRWGYFDKAGQMRDMIQNHL LQILTMIAMSPPADLSTDRIRDEKVKVLRSLRRIDHSNVRDTTVRGQYTAGFVQGKKVPG YLEEEGANKTSNTETFVSIRVDIDNWRWAGVPFYLRTGKRLPSKCSEVVIYFKNPPLNLF RDSYQELPQNKLTIRLQPDEGVQIDILNKVPGLEHKHRLQTTKLDLSFSDTFHQEHLADA YERLLLEAMRGIQALFVRRDEVEEAWKWVDSIMEAWAADNESPKPYQAGTWGPVASVAMI SRDGRAWNEFE >gi|316920095|gb|ADCU01000002.1| GENE 143 141295 - 141990 205 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163781723|ref|ZP_02176723.1| 50S ribosomal protein L13 [Hydrogenivirga sp. 128-5-R1-1] # 1 209 1 196 228 83 29 8e-15 MAQFKEFPSAQALNEQFAEEIAAALSHSIGAQGQASLVVSGGRTPLGLFEALTQQAIEWS KVTITLADERWVDANDDSSNEKLVREHLLKGYASDAKFVGLKNSHATPFAGAEDTEQALK VIARPFDVVILGMGDDGHTASLFPGAENLFPALAMDSGRVCMGMTPLTAPLDRITLTLPA LLNSRHIYLHVVGDSKRDVYQRAIQGTDVNEMPIRAVLQQTRTPVDIYWTA >gi|316920095|gb|ADCU01000002.1| GENE 144 141998 - 143812 1615 604 aa, chain + ## HITS:1 COG:ECs2561 KEGG:ns NR:ns ## COG: ECs2561 COG0129 # Protein_GI_number: 15831815 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli O157:H7 # 1 603 1 603 603 975 79.0 0 MNPTVSRVTQRIIERSRDSRAAYLAKIEHARSKKVHRSQLACGNLAHGFAACGQEDKASL TSMTKSNIGIVTSFNDMLSAHQPYETYPQQIKAALHTVGAVGQVASGVPAMCDGVTQGQD GMELSLMSREVIAMSAAVGLSHNMFDGALYLGVCDKIVPGLFMAAMSFGHLPTLFVPAGP MPSGLPNKEKVRVRQLYAEGKLGRDALLEAEAASYHAPGTCTFYGTANSNQMVIEVMGLH LPGASFVQPDMPLRAALTDAAARQVTRMTETSGNYMPVGRMVDEKVIVNGIIALLATGGS TNHTMHLVAMARAAGIHINWDDFSDLSDVVPLMCRIYPNGPADINHFQAAGGVPVLVQEL LKGGLLHEDVDTVAGHGLSRYTQEPFLEDGKLVYRPGPTQSHDSNVIASFDKPFESHGGT KVLTGNLGRAVMKTSAVPTDNQIIEAPAVVFHSQHDVVPAFEAGKLDKDCIVVVRYQGPR AIGMPELHKLMPPLGVLMDRGLKVALVTDGRLSGASGKVPSAIHVTPEAYSGGLLAKVRD GDMIRLNGKTGELTLLVDEAELANRELVHPDLSALHDGSGREMFAALREQLSGAEEGASC IKFY >gi|316920095|gb|ADCU01000002.1| GENE 145 144065 - 144706 823 213 aa, chain + ## HITS:1 COG:YPO2067 KEGG:ns NR:ns ## COG: YPO2067 COG0800 # Protein_GI_number: 16122306 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Yersinia pestis # 1 213 1 213 213 333 85.0 1e-91 MKNWKVSAESIMTAGPVVPVIVIKKLEQAVPLAKALIAGGVRVLEVTLRTECAVEAIRLI AKEVPEAIVGAGTVTNAKQLAEVTEAGAQFAISPGLTADLLKAATAGSIPLIPGISTVSE LMLGMDHGLKEFKFFPAEANGGVKALQAIAGPFSHVRFCPTGGINPQNYRDYLALKSVLC IGGSWLIPNDALDNGDYARITELAKEAVAGAKA >gi|316920095|gb|ADCU01000002.1| GENE 146 145329 - 145760 444 143 aa, chain + ## HITS:1 COG:YPO2068 KEGG:ns NR:ns ## COG: YPO2068 COG2076 # Protein_GI_number: 16122307 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Yersinia pestis # 1 143 8 154 154 143 60.0 1e-34 MIYWIFLACAIAAEIIGTLSMKWASLSGGMTGNIVMLVMITISYIMLSFAVKRVALGVAY ALWEGIGILFITLFSVLWFDESMSMMKLMGLATLIAGIALVKSGTVKTKKSPAKAGEQKS TVAAKTKPAQSKSNVTGGNHATA >gi|316920095|gb|ADCU01000002.1| GENE 147 145747 - 146076 534 109 aa, chain + ## HITS:1 COG:STM1483 KEGG:ns NR:ns ## COG: STM1483 COG2076 # Protein_GI_number: 16764828 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Salmonella typhimurium LT2 # 1 109 1 109 109 127 76.0 6e-30 MQQLEWFHIAWLALAVVLEILANIFLKWSDGFRRIWMGLLSLAAVLGAFSSLAQAVKGIE LSVAYALWGGFGIAATVAAGWILFGQRLNKKGWAGLTLLLAGMIMIKLA >gi|316920095|gb|ADCU01000002.1| GENE 148 146127 - 147311 913 394 aa, chain - ## HITS:1 COG:STM1557 KEGG:ns NR:ns ## COG: STM1557 COG1168 # Protein_GI_number: 16764901 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Salmonella typhimurium LT2 # 4 390 2 388 400 577 70.0 1e-164 METNFDLIINRHATGSVKWDFMDRYQNMQTHNLLPMWVSDFDFACPPNVLEALHNRVDHG VFGYSERDEGYYAALINWFARRHQLEISPDWICSIEGVVPGLSLLIQMLSQSGDGVVVQG PYYGSFAKIIQLNQRKLLENPLVEDETLGYVMDFAQLETVFREQKPTLFLLCNPHNPTGR CWSKEELTQLLTLCEKYDVTVLSDEIWADLLLPGSTFTSVLHLGERWHSRVIAATSASKT FGLSSLRISNFLIPNNEIKTRFIERLNAHGLDVFNALSMEAASAAYRSSAQWLDEMLAYL AANRDWFVEQVKTHLPWAKISPAQGTYLIWMDCRSLNVSDDDLKMIMTECAGIAPSMGAG FGPHGSGFIRLNLGCPRRYLEQAIEGLIRIKPQR >gi|316920095|gb|ADCU01000002.1| GENE 149 147311 - 148765 1238 484 aa, chain - ## HITS:1 COG:STM1556 KEGG:ns NR:ns ## COG: STM1556 COG1757 # Protein_GI_number: 16764900 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 3 469 2 468 483 737 87.0 0 MNAKENNDKKTLSLGLALIPIISMLTLLIVGYGVMGLRIEPLLLCSAAIAAGLAYWQGYC WDDVINSIVSKLAKAMPVVMILICVGGLIGTWMFSGTIPYMVYWGLKLISPQYILIAAFF LTSVVSVCTGTSWGSAGTVGVALMGVASGLDVPLAAAAGAVVSGAYFGDKISPLSDSTNF AAIVADTTLFEHIQHLMYTTIPSFILATIVYLIAGHSSMMGDVATPQRVTDIINALDGLY HFNIVLILPPVIVLWGAISKKPVIPLMLSACVLAIILGVWLQGLSVKQGLDAFMDGFNLS MFPQGAEGIIADVPRLLNRGGLFSMMSTILLVFCAFSFAGALTLTGALTIIINRLLTVIH SVGQLIAATIGTTILVTGATSDGKLALLVPAELYQDAYRRMGLDTKNLSRTIEDAGTVIE PLIPWTAAGVYMATTLGVSTLDLLPWAVQCYSAIFFALIYGFTGFGIAKAQPEPIAVQSR EENL >gi|316920095|gb|ADCU01000002.1| GENE 150 148911 - 149915 626 334 aa, chain - ## HITS:1 COG:STM1555 KEGG:ns NR:ns ## COG: STM1555 COG1609 # Protein_GI_number: 16764899 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 329 1 329 335 513 77.0 1e-145 MATMKDVALRAGVSTATVSRVINQTSYVEPVTRERVEKAMRDLNYRRNAAALALAKRSGD MLGLLTGNLADPFFARLARGVEEVARQQGFRLMVCSGGHQAELEKSGLDFLINQGCEAIV VHATRMSDQELVRYSAHSPAMVIVNRYIASSANRCVWLDNLSAAREATRHLLQKGHRCIA CITSDLPIDDRQQRLEGYRMALSEYGIMPEKSWIISVPFDEEGGEIAAQKLLDSGVPFTA AFTFNDVMAAGMMRALHQRDIRLPEQLSLIGFDDVVLARYLYPALTTMHYPVERMARRAA MLAIQLSQQQTPPPRSLRFEAGLIERDSVICLSE >gi|316920095|gb|ADCU01000002.1| GENE 151 149919 - 150263 479 114 aa, chain - ## HITS:1 COG:YPO2070 KEGG:ns NR:ns ## COG: YPO2070 COG0251 # Protein_GI_number: 16122309 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Yersinia pestis # 1 113 1 113 114 171 80.0 3e-43 MSIERINPEKRWSDATVFNDTIYYTSVPENLDDDATSQTANALAAIDMILNQLGTDKTRI LDATIFLANGDDFQAMNAAWDAWVPAGKAPVRCTVQAKLMNPKYKVEIKIIAAR >gi|316920095|gb|ADCU01000002.1| GENE 152 150501 - 150818 450 105 aa, chain + ## HITS:1 COG:no KEGG:ASA_3888 NR:ns ## KEGG: ASA_3888 # Name: not_defined # Def: hypothetical protein # Organism: A.salmonicida # Pathway: not_defined # 1 99 1 99 101 120 61.0 2e-26 MTVLLQIDFKMPAEMLGERLAELATPLAQSITQEQGFISKIWTENVDTGEAGGIYLFNDK ASAEQYAAMHIKRVAQMGATDIRSRIFDINIPLTHITRGNLKPAG >gi|316920095|gb|ADCU01000002.1| GENE 153 151045 - 152886 1566 613 aa, chain + ## HITS:1 COG:ECs2517 KEGG:ns NR:ns ## COG: ECs2517 COG1199 # Protein_GI_number: 15831771 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Escherichia coli O157:H7 # 1 604 27 630 636 998 79.0 0 MAEAVTKAIQFKEELVVEAGTGTGKTYAYLVPALRSGAKVIISTGSKALQDQLYARDLPT VRDALKFAGKLALLKGRSNYLCLERLEQQSMVGGELASEALSDLMHLRGWAIQTEDGDVS NCHGVSEDSIIWPLVTSTNDNCLGSDCPQYKDCFVVKARRRAMDADIIVVNHHLFLADLV VKETGFGELIPDADVMIFDEAHQLPDIASQYFGQQLTSRQLMDLAKDITIAYRTEVRDTA QLQKCADRLSQSAQDFRLALGDPGYRGNLREALALPEVQRALVLLDDALELCYDVVKMSL GRSALLDAAFERATTYRNRLKRLRDVSIPGYSYWYECNSRHFVMALTPLTVAEKFNEVMK DKPGSWIFTSATLAVNDDVSHFTARLGLNKAKSLLLPSPFDYANQAMLCVPRFLPTPNQR GAARQLARMLRPVIEANEGRCFFLCTSHAMMRDLAEEFRATMTLPVLLQGETSKPRLLAE FVAAGNALLVATSSFWEGVDVRGDTLSCVIIDKLPFTSPDDPLLKARIEDCRVRGGDPFA EVQLPDAVITLKQGVGRLIRDTSDRGVVIICDNRLVMRPYGEVFLNSMPPAPRTRDLNKV IEFLKAGNPSAIE >gi|316920095|gb|ADCU01000002.1| GENE 154 153079 - 153780 620 233 aa, chain + ## HITS:1 COG:YPO2072 KEGG:ns NR:ns ## COG: YPO2072 COG1214 # Protein_GI_number: 16122311 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Yersinia pestis # 1 232 1 232 232 343 76.0 2e-94 MSTRILAIDTATEACSVALWNNGEKHALFEICPREHTQRILPMVQQILAESGVSLNQLDA LAFGRGPGSFTGVRIGIGIAQGLAMGADLPMIGVSTLATMAQGAFRQMGATQVLAAIDAR MGEVYWGQYQRQNDGVWLGENTEAVFTPERAQQNVMALAGEWASVGTGWGTYPDMAAATS ITLVDGQITLPQAEDMLPLALVDFALGKMTAVENAQPTYLRNEVTWKKLPGRE >gi|316920095|gb|ADCU01000002.1| GENE 155 153846 - 154457 552 203 aa, chain + ## HITS:1 COG:STM1819 KEGG:ns NR:ns ## COG: STM1819 COG3065 # Protein_GI_number: 16765160 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Starvation-inducible outer membrane lipoprotein # Organism: Salmonella typhimurium LT2 # 8 202 5 193 193 230 61.0 1e-60 MPSKHWVRRLVSVAIVCSPLLLSGCVTIPDSIKGTSATPQQNFVAVHNAPDLYVGQESRF GGTVVNVVNQKDATTLEIAVMPLDDTARPILNQPSVGRLIAKSPTFLDPVDFKGQLVTVV GPLTGSVEGKIGKTPYTFVTMDIQGYQRWHITQEIVMPPQPFGPWDYGYGAYGRGGFWGP GFGPGWGWYNPGPARVQSVVTEN >gi|316920095|gb|ADCU01000002.1| GENE 156 154513 - 155394 649 293 aa, chain - ## HITS:1 COG:STM4193 KEGG:ns NR:ns ## COG: STM4193 COG1187 # Protein_GI_number: 16767443 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Salmonella typhimurium LT2 # 1 293 1 289 289 440 82.0 1e-123 MLTNSSTRLNKYISESGICSRRDADRYIEQGHVFINGKRAGIGDQVFAGDVVKVNGQLIE PRDADDLVLIALNKPVGIVSTTENGEKDNIVDYVNHSTRVFPIGRLDKDSQGIIFLTNHG DLVNKILRAGNDHEKEYLVTVNKPVTDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT LVQGLNRQIRRMCEHFGYEVTKLERTRIMNVSLSGLPLGEWRDLTDDELIELFKAIEDSS SEAKPTKKAKPKAKPAAAKSPPNKGAKPAGKSSSADASSRKRFTQPGRKKKGR >gi|316920095|gb|ADCU01000002.1| GENE 157 155546 - 155752 80 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFNKILTQRTSSWKNNVQVAICITKISVATVVDAVKNAPAIKAKSGLKAAVGIISKRVTF CKISTISG >gi|316920095|gb|ADCU01000002.1| GENE 158 155847 - 157529 1623 560 aa, chain + ## HITS:1 COG:YPO2074 KEGG:ns NR:ns ## COG: YPO2074 COG0318 # Protein_GI_number: 16122313 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Yersinia pestis # 1 553 1 553 562 971 83.0 0 MEKVWLKRYPADVPAEIDPDQYASLVEMFEQSVARFADQPAFINMGQVMTFRKLEERSRA FAAYLQNELGLKKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELEHQLNDS GASAIVIVSNFAHTLEKVVFNTQVKHVILTRMGDQLSAAKGTLVNFVVKYIKRLVPKYNL PDAISFRSALQRGRRLQYIKPDITNNDLAFLQYTGGTTGVAKGAMLTHRNMQANLVQSRA AYGPLLHEGHELVVTALPLYHIFALTVNCLLFIEMGGCNLMITNPRDIPGMVKELSRYPF TALTGVNTLFNALLNNEDFRELDFSTLRLSVGGGMSVQRSVAEKWEKLTGRHLLEGYGLT ECAPLVSGNPYDLQHYSGSIGLPVPSTDVRLVDDEGNEVAHGEAGELQVKGPQVMLGYWQ RPEATDEILKDGWLSTGDVVTVDDEGFLRIVDRKKDMILVSGFNVYPNEIEEVVSMHDKV LECAAIGVPSEASGEMVKICVVKKDPSLTRDELIAHCRKHLTGYKVPKSVEFYDELPKSN VGKILRRKLREEQTASKGAA >gi|316920095|gb|ADCU01000002.1| GENE 159 157648 - 158763 868 371 aa, chain + ## HITS:1 COG:YPO2075 KEGG:ns NR:ns ## COG: YPO2075 COG0349 # Protein_GI_number: 16122314 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Yersinia pestis # 1 356 1 358 373 520 72.0 1e-147 MNYQLITTSSDLKQVCEQASRHAYIALDTEFVRTRTYYPQLGLIQLFDGETLTLIDPLPI TDWQPFVALLKNPEVTKLLHACSEDLEVFLHEFQTLPTPMIDTQILAAFTGRALSCGFAA MVNDYLQVELDKSESRTDWLARPLTERQCEYAAADVFYLLPLADKLIAEVAEAGWLDAAK DDCLSLCRRRQDVVDPALAYRDITNAWQLRTRQLACLQKLAEWRLNQARQRDMAVNFVVR EENLWQVARYLPTSQGELGELGLSGPEIRFHGKTLVALVAESANIPESQWPQPVERLVDH SGYKHAFKELKTAIQNAAERSGLTAELIASRRQINALLSWHWKLKDEQPELLQGWRDKLV GEQVRVILATL >gi|316920095|gb|ADCU01000002.1| GENE 160 159149 - 159418 242 89 aa, chain - ## HITS:1 COG:YPO2076 KEGG:ns NR:ns ## COG: YPO2076 COG0851 # Protein_GI_number: 16122315 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation topological specificity factor # Organism: Yersinia pestis # 1 89 1 89 89 148 92.0 2e-36 MALLDFFLSRKKPTANIAKERLQIIVAERRRGDSEPQYLPQLKRDILAVICKYVQIDPEM LTVQFEQKGDDISVLELNVTLPEAEEAAK >gi|316920095|gb|ADCU01000002.1| GENE 161 159422 - 160234 822 270 aa, chain - ## HITS:1 COG:YPO2077 KEGG:ns NR:ns ## COG: YPO2077 COG2894 # Protein_GI_number: 16122316 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Yersinia pestis # 1 270 1 270 270 481 92.0 1e-136 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDF VNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTHEGVEKVLNDLGEMEFDFIVCD SPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAEKGEDPIKEHLLL TRYNPGRVSRGDMLSMEDVLDILRIPLVGVIPESPSVLRASNQGEPVILDKESDAGQAYQ DMVDRLLGEERAFRFVEEEKKGFLKRLFGG >gi|316920095|gb|ADCU01000002.1| GENE 162 160260 - 160943 351 227 aa, chain - ## HITS:1 COG:YPO2078 KEGG:ns NR:ns ## COG: YPO2078 COG0850 # Protein_GI_number: 16122317 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Yersinia pestis # 1 226 1 227 228 342 77.0 4e-94 MSQSPIELKGSSFTLSVVHLHNSQPEVIREALIEKVEQAPAFLKNAPVVINIANVPEGAS WQKLQQAITEAGLHVIGVSGCTDEGLKRAITRAGLPLLSEGKGIKKSEPVVLPEPPAPVK TRIISTPVRSGQQIYARDCDLIVTSSVSAGAEIIADGNIHIYGMMRGRALAGASGDTSSQ IFCAHLAAELVSIAGQYWLSDQIPEAFYGQAARLNLSDSALTIQPLF >gi|316920095|gb|ADCU01000002.1| GENE 163 161080 - 161364 273 94 aa, chain + ## HITS:1 COG:YPO2080 KEGG:ns NR:ns ## COG: YPO2080 COG3100 # Protein_GI_number: 16122319 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 89 1 89 90 126 70.0 1e-29 MICTIYRSSKRDQTYLYVEKRDDFSRVPEELMKSFGQPQLAMMIDLESKKKLATADIEKV KNDLKEQGYYLQLPPPPESLLKMHIAQAKKSADE >gi|316920095|gb|ADCU01000002.1| GENE 164 161601 - 162257 623 218 aa, chain + ## HITS:1 COG:YPO2082 KEGG:ns NR:ns ## COG: YPO2082 COG0179 # Protein_GI_number: 16122321 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Yersinia pestis # 1 218 1 218 218 377 81.0 1e-104 MYQHRDWQGALLELPVSKVVCVGSNYGGHIKEMGGTQAAEPVLFIKPETALCDIRQPVAI PKDFGSVHHEIELAILIGTPLKQASEDRVARAIAGYGVALDLTLRDVQAECKKAGRPWEK AKAFDGSCPISGFIPEAEFGDPQNTELVLSINGSVRQQGSTRDMITPILPLISYMSRYFT LRAGDIILTGTPQGVGPLVSGDMLTLSVKGNSLSTRVI >gi|316920095|gb|ADCU01000002.1| GENE 165 162364 - 162819 358 151 aa, chain + ## HITS:1 COG:ECs1676 KEGG:ns NR:ns ## COG: ECs1676 COG2983 # Protein_GI_number: 15830930 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 147 11 157 158 239 78.0 1e-63 MTTLPFWQEKTLADMSNDEWESLCDGCGQCCLHKLQDEDTDEIYFTNVACNLLNIKTCQC RHYERRFEYEEDCIKLTRENLETFEWLPPTCAYRMVHEGKDLPEWHPLKVGSKKAMHAER ISVRYIAVRESEVNDWEEHIMNKPFWATNGE >gi|316920095|gb|ADCU01000002.1| GENE 166 163438 - 164004 421 188 aa, chain - ## HITS:1 COG:ynaF KEGG:ns NR:ns ## COG: ynaF COG0589 # Protein_GI_number: 16129337 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli K12 # 36 188 15 168 168 158 54.0 5e-39 MTYLFHSVSNGLFIHRIRYQSLYISNKVVKLNKEDIFLKSKTGGHMYNTILVPVDITEVE LTRQAIPHVEQLAKLVDSHIHFVVVIPSSPYYSAFGFGYAAAVDKQDILKAANDALIKTA KEFNIPEDRATTHAVMGSPKEQILKLADIINADLIVIGSHRPSTRTYLLGSNAAAVVRHA KCSVLVVR >gi|316920095|gb|ADCU01000002.1| GENE 167 164271 - 164462 207 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMHQFKVIYKSNNQTHDFIMNGQATLNKTDGEVLEAALIDVAQYLNASAKDLHIISVERL QHL >gi|316920095|gb|ADCU01000002.1| GENE 168 164692 - 165222 332 176 aa, chain - ## HITS:1 COG:YPO2141 KEGG:ns NR:ns ## COG: YPO2141 COG1495 # Protein_GI_number: 16122376 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Yersinia pestis # 1 176 1 176 176 274 76.0 6e-74 MLQYLNGCSRGRGAWILLAVTALILELVALYFQHVMLLKPCVLCIYERCALFGIMGAGIV GAIAPKTPLRFVAILLWIYSTYEGLMLAWKHTMIQLHPSPFVTCDFFVSFPSWLPLDKWA PAIFSASGDCSVRQWEFLTLEMPQWLVGIFAAYLVVAVLVLIAQFVKPKRRDLFGR >gi|316920095|gb|ADCU01000002.1| GENE 169 165237 - 165371 67 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPQQDERSVNYIVLPASHLIKKLVIVTVLLSDLMNTREDLIDWW >gi|316920095|gb|ADCU01000002.1| GENE 170 165333 - 166910 1033 525 aa, chain - ## HITS:1 COG:STM1806 KEGG:ns NR:ns ## COG: STM1806 COG3067 # Protein_GI_number: 16765147 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 1 513 1 511 514 694 74.0 0 MNTTFTQAFSKNFLGNAPDWYKVAIVIFLLLNPLVFFYVSPFAAGWLLVAEFIFTLAMAL KCYPLLPGGLLAFEAIIIGMTTADKVKHEVAANIEVLLLLIFMVAGIYFMKQLLLYVFTK LLLNIRSKIALSLAFCIAAAFLSAFLDALTVIAVVISVAVGFYGIYHSVASGTTGTLSLN DDSHLQNAGRRAILNQFRAFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKSADWDFVSF LLRMSPVTVPVFICGVLTCYLVERFKVFGYGARLPKRVRQVLREYDQNATRKRTRQERQK LIIQALIGIWLIFALAFHLAEVGLIGLSVIVLATAFCGVTDEHAIGKAFQESLPFTALLT VFFAVVAVIIDQQLFSPVIHFVLQASPEHQLTLFYLFNGLLSSISDNVFVGTVYIHEAKA ALESGVISLKQFEMLAVAINTGTNLPSVATPNGQAAFLFLLTSALSPLIRLSYGRMVWMA LPYTIVMTLVGLACVQFTLEPMTQLFYQWHWLSLPPVNEVFSSVH >gi|316920095|gb|ADCU01000002.1| GENE 171 167156 - 167287 182 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNEDIFDFDIDAQLELAEKRAQEKANEVPVELNDEADCEGCKI >gi|316920095|gb|ADCU01000002.1| GENE 172 167358 - 167696 278 112 aa, chain - ## HITS:1 COG:YPO2233 KEGG:ns NR:ns ## COG: YPO2233 COG2879 # Protein_GI_number: 16122462 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Yersinia pestis # 12 112 1 101 101 133 59.0 1e-31 MVEKLHHTPSMMIKTGLPWKRQAQPGMTITRCLPLSLGESQPTSAWQWAKLTLRRVAQSF RLMVGVQDYQNYLRHQQLHHPVLTPMSEREFHRYCLEARFPSQGGKLGKCPC >gi|316920095|gb|ADCU01000002.1| GENE 173 167689 - 169755 1862 688 aa, chain - ## HITS:1 COG:YPO2234 KEGG:ns NR:ns ## COG: YPO2234 COG1966 # Protein_GI_number: 16122463 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Yersinia pestis # 1 688 1 688 688 1163 89.0 0 MKNVRSGLIWLLVALIGAYAFGMLALSRGEHINAVWLVVAAIACYSIAYRFYSLFIAEKV FELDDRRLTPAERHNDGLDYVPTNKWVLFGHHFAAIAGAGPLVGPILAAQMGFLPGTIWI LVGVMLAGAVQDFLVLFISTRRDGRSLGEMAKQELGSFAGVITMLGALGVMIIILSALAL VVVKALADSPWGLFTIAATIPIALFMGVYMRYLRPGKIAEVSIIGFVLMMAAIIYGGDIA MHPYWGPFFTLHGTTLTWVLVIYGFIASVLPVWLLLAPRDYLSTFLKIGVIAGLAVGIVF AAPEMKMPAVTRFIDGSGPVFSGSLFPFLFITIACGAISGFHALVSSGTTPKLIERESHI RFIGYGAMLMESFVAIMALICASVIDPGVYFAMNSPAALIGTTVENASQVINSWGFVVTP ETLAMIAKDVGENSILSRAGGAPTFAVGMAHIITEVFNSRAMMAFWYHFAILFEALFILT AVDAGTRACRFMVQDLVGVAIPSLANNRSWFGNLAGTTVAVAGWGFFVYQGVVDPLGGIN TLWPLFGIGNQMLASMALILGTVVLFKMKKQRYAWVTILPTVWLFVTSMTAGWQKIFHEK PSIGFLAQAKRFSAGIDSGTLIAPAKTIKDMETIVMNNYINAALCGFFMLVAVTMLISAF FVIRRALDSNKPTVHETTPALREERSHG >gi|316920095|gb|ADCU01000002.1| GENE 174 170140 - 171444 1158 434 aa, chain + ## HITS:1 COG:YPO1617 KEGG:ns NR:ns ## COG: YPO1617 COG1252 # Protein_GI_number: 16121885 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Yersinia pestis # 1 434 1 434 434 756 87.0 0 MSASKKKIVIVGGGAGGLELATSLGHKLGRKDKAEIILIDRNHSHLWKPLLHEVATGSLD DGVDALSYLAHARNHHFTFQLGSLTNIDRAAQQLTLADIRDEQGEVLVPQRELSYDILVM ALGSTSNDFGTPGVKDNCIFLDNPHQARRFHNEMLNLFLKFSAQKDKAAKVNIAIVGGGA TGVELSAELHNAVKQLHSYGFEGLSSEALNVTLVEAGERILPALPPRISGAAHNELTKLG VRVLTKTMVTSADKNGLNTKDGEFIPADLMVWAAGIKAPDFMKDIGGLETNRINQLVVEP TLQTTRDPNIFAIGDCASCPQPSGGFVPPRAQAAHQMASRCYANILAQLKGGNMKPYIYK DHGSLVSLSKFSTVGSLMGNLMRGSMMVEGRIARMVYISLYRMHQIALHGYIKTGLMMLV GGINRVIRPRLKLH >gi|316920095|gb|ADCU01000002.1| GENE 175 171777 - 172316 561 179 aa, chain + ## HITS:1 COG:ycfJ KEGG:ns NR:ns ## COG: ycfJ COG3134 # Protein_GI_number: 16129073 # Func_class: S Function unknown # Function: Predicted outer membrane lipoprotein # Organism: Escherichia coli K12 # 1 179 1 179 179 262 83.0 3e-70 MNKSMLAGVGIGVAAALSVAAVASLDVFSTGPRYAQVLSATPIHESVKTPRQQCRNVTVT HRRPVQDENRIAGSVLGAVAGGVLGHQIGNGRGKDVATVVGALGGGYAGNQVQGSMQNND TYTTTQQRCSTVYDKSQKLLGYDVTYKIGDQQGRVRMDKDPGTQIPVDRNGQLVLNQSV >gi|316920095|gb|ADCU01000002.1| GENE 176 172371 - 175832 3205 1153 aa, chain - ## HITS:1 COG:YPO1625 KEGG:ns NR:ns ## COG: YPO1625 COG1197 # Protein_GI_number: 16121893 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Yersinia pestis # 1 1153 1 1147 1148 1899 82.0 0 MSEQYQFTLPERYTLPAKAGDVRLLGQLTGSACALECAQIAEKHTGPVVLITSDIQSALR LRDEIQQFTSRMVTTLSDWETLPYDSFSPHQDIISARLSSLYQLPTMKRGVFILPVNTLM QRVCPHEFLHGHALVMQKGQLLSRDKLRSQLEQAGYRSVDQVMEHGEFATRGALLDLYPM GSDEPYRIDFFDDEIDSLRVFDVDSQRTLNEVEFINLLPAHEFPTDQTAIELFRSQWREH FEVRRDPEHIYQQVSKGIWPAGIEYWQPLFFSQELPPLFSYFPASTLLINTGELEASAER FWLDVNQRYENRRVDPMRPLLTPDKLWLRVDELFSSLKKWPRVQLKTDKLDKKAANTNLN YQPLPELTVQAQNKSPLDNLRRFIESTKDAIVFSVESEGRRETMLELLARIKISPSLISR IEDAEAGKIYIMQGSCEHGFINPELKLALICESDLLGERVSRRRQDNRRTINTDTLIRNL AELSIGQPVVHLEHGVGRYGGMTTLEAGGIKGEYLILTYAGDAKLYVPVSSLYLLSRYSG GADESAPLHKLGSDAWTRARQKAAEKVRDVAAELLDIYAMRAAKPGFAFKQDREAYQMFC QSFPFETTPDQSMAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVHNNKQVAV LVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQVLQDAAEGKVDILIGTHKLL QADVQWRDLGLLIVDEEHRFGVRQKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLS IIATPPARRLAVKTFVREYDSLVVREAILREVTRGGQVYYLYNDVENIEKAAQCLAELVP EARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIIIERADHFGLA QLHQLRGRVGRSFHQAYAYLLTPPPKAMSTDAQKRLEAIASLEDLGAGFALATHDLEIRG AGELLGDDQSGQMTTIGFSLYMELLESAVDALKEGREPSLEDLTSNQTDVELRMPALLPD DYIPDVSTRLSFYKRIASAKNDDQLEELKVELIDRFGLLPDAARNLLQSAKLRLDAMALG IRRIEGNDKGGFIEFSEKNHVDPMFLIGLLQKKPQIFRLDGPTKLKFIVDLSERKARLEF IGSLLNEFTEHRV >gi|316920095|gb|ADCU01000002.1| GENE 177 176134 - 178674 1540 846 aa, chain - ## HITS:1 COG:YPO3028 KEGG:ns NR:ns ## COG: YPO3028 COG3468 # Protein_GI_number: 16123205 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 174 846 118 759 759 553 47.0 1e-157 MDKKITLIALSLIQAFSLAGYANQASAATFCGDRPNVTWGGDSTISGDLGADQCYEIGAG PGYAGSGINLNALAGSKLSVVGYLKDSTVNDGAEVWIGKDPMIAWDDYFADAPANATNII IKSGALIRVVESGTLQDSQIDGGTVYVYKNKVDGGQSIDNSVNAGGRLFVYLEGKSQGTI INDGGTEFVQQKGTSQNTLINSGGTQQVRLEGQADNTTINDGGTQYVTTGGVATNTHVHG GSQILTATETNPLGGTAQHTQVYLDGTQHILMGSSAVDTQLFDHAEQYIYASSSAENVTI NDNASTTLRDTAQLLGETQINNQGRLNIIAEDQDAEAYAESVNLNGENTAVQIFANGSDT QGAHIGILQGNGNVIFSQANADTHSHLNVDKLSGNLNFLFNSSIQEGRGDFLTIADGSGN HKVVVQDSGKEITDPGNTTLNLINDQSSGAHFSLASLSGHTIAAVDGGTYMYTLKKQADK DGMHGDVWYLGSDFSSTPDPEPTPDPDPTPDPDPTPDPDPTPEPEPTPEPEPTPEPQPKP QTTPSTDAVLSMASANQFIFDGELQSLRFRKGDLNASKGQNAGIWGRYLTNNTHVESTNN AAYRMQQNGFEIGGDKVFTLESGYLLAGAFTSYSDNSLKHARGGNSSIDSYSIGAYLTYF DNSGYYIDGVLKANRFSNSLNARMTSGSSARSDYHQNAIGGALEAGYHYSFADTWFAEPY LRTSYFIAESKDITLNNGMKANIDNNRSAKAEIGSTFGTQFSLSNGTDIKPYIRVAVERE FIKSNNVTINRNNDFNNDFSGNAGKYGAGVNVQVTSTTTLYAEANYRNGQHVESPLMGNV GFRINF >gi|316920095|gb|ADCU01000002.1| GENE 178 178810 - 179466 161 218 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPQIAIVERCHFIRNGLKSLLLDITQEQGHHTEIHTFNSISDIDKCRYKSVENDLDRLIM VVNASSGFYSLTKGFHPFIENLVARIPNIKIIIICEDTLQRLAYHELRSHHSVSGIISTK SKIDDLKAQLESVVYSHNQSVRPNNSSRIMLTKREQQVINALLSGKSAATIAGKLNVSQK TISAHKINALKKLNIRTIALLFDILPLSSQEINMNPYQ >gi|316920095|gb|ADCU01000002.1| GENE 179 180301 - 181500 1096 399 aa, chain + ## HITS:1 COG:STM1217 KEGG:ns NR:ns ## COG: STM1217 COG4591 # Protein_GI_number: 16764572 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Salmonella typhimurium LT2 # 1 399 38 436 436 532 73.0 1e-151 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALVIVLSVMNGFERDLENNIL GLMPQALITSTQGSINPEQVPATQFEHLAGVKRVAPLTTGNAVLQSAHSVAVGVILGVNP NEKEPLSAYLNGSNLQALQPGQYNVILGDQLAGQLGVKRGEKLRIMVPSASQFTPMGRIP SQRVFNVVGTFSADSEVDQYQMLMNQQDASRLMRYPLGNITGWRVYMDKPLAIDALVSQP LEKGLEWKDWRERKGELFQAVKMEKNMMGLLLSLIIAVAAFNIITSLSLLVMEKQGEVAI LQTQGLTRGQIMSVFMVQGASAGIIGALLGAGLGVVFASQINVIPGLGEMLAGGNLPVDI NILQVVLIAVVAMLLALLSTLYPSWRAAAVNPAEALRYE >gi|316920095|gb|ADCU01000002.1| GENE 180 181493 - 182212 236 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 1 222 1 210 309 95 29 2e-18 MSNSPSLYKELLQCKDLCKTYHEGKLHTDVLRNVTFDMQPGEMMAIVGSSGSGKSTLLHL LGGLDSPTSGEVIFKGQSLNEMSSTAKAELRNRELGFIYQFHHLLPDFSALENVMMPLLI GGKKGEDAQGKAMDMLTAVGLAKRSHHRPSELSGGERQRVAIARALVNNPSLVLADEPTG NLDMRTADSIFDLLGELNVRQGTAFLVVTHDLALAKRLNRQLEMRDGQLQQNVTLMGAQ >gi|316920095|gb|ADCU01000002.1| GENE 181 182212 - 183462 1079 416 aa, chain + ## HITS:1 COG:YPO1628 KEGG:ns NR:ns ## COG: YPO1628 COG4591 # Protein_GI_number: 16121896 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Yersinia pestis # 1 414 2 415 416 614 78.0 1e-176 MSVSPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELDHRI LSVVPHGEIFPVEQPFTGWPQVLERVEKVKGIVAAAPYVEFTGLIESGTQLVAVQLRGVN PEQESRVSSLSQYVQDNAWSKFKAGEQQVILGKGVADALHVKVGDWVTVMVPNNDPQMKL LQPKRIRLHVSGILQLSGMLDHSLAMVPLADAQQYQDLGDSVTGISIKVNDVFNADKLVR DAGEVTNAYVYLRSWKGTYGYMFRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKS SDIAVLRTLGAKDRLIRAIFIWYGLLAGMVGSVSGVVIGVVASLQLTNISKIIEKVIGHR LLSGDIYPIDFLPTELHWVDVVEVLATAIILSLVASWYPARRASRIDPARVLSGGQ >gi|316920095|gb|ADCU01000002.1| GENE 182 183492 - 184403 291 303 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 4 301 7 318 319 116 28 8e-25 MYYGFDMGGTKIELGVFDAELNPIWQKRIATPHDDYRELLNAFASLVFEADNLTGTQGQV GIGCPGSIDADKGTLYAVNIPSALGKPLPRDLSALIKRPVRVDNDANCFALSEAWDAEFR AYPSVLGIILGTGVGGGLIINGKSFTGRNYLAGEFGHLRLPVDALDRIGMDTPRLACGCG QQGCIENYISGRGFEWLYQYRTGEKLGAKDIIARYRAADAQALAHVDCFADVLAICLGNL FTVIDPHLVVLGGGLSNFSELYPLLNERVPRSMLSAAKAPRIEPARYGDAGGVRGAAFLN LTD >gi|316920095|gb|ADCU01000002.1| GENE 183 184578 - 185294 671 238 aa, chain + ## HITS:1 COG:YPO1630 KEGG:ns NR:ns ## COG: YPO1630 COG0846 # Protein_GI_number: 16121898 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Yersinia pestis # 1 233 36 268 278 415 82.0 1e-116 MTKPYVVVLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGYHRDPELVQRFYNARRH QLQQPEIQPNGAHLALAELERQLGDHFMLVTQNIDNLHERAGNTRIIHMHGELLKACCTQ SGQVIRWEGDLSVDDRCHCCQFPAPLRPHIVWFGEMPIGMDDIYEALAKADYFIAIGTSG HVYPAAGFVHEAHLNGAHTVELNLEPSQVESQFDEKHYGAASQVVPEYVRELLEDIYK >gi|316920095|gb|ADCU01000002.1| GENE 184 185372 - 186007 507 211 aa, chain - ## HITS:1 COG:ybdM KEGG:ns NR:ns ## COG: ybdM COG1475 # Protein_GI_number: 16128584 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 6 211 9 209 209 238 59.0 6e-63 MKIDTLVNDLKVELESMPEAIKIEALNKIRVMLHQVSPFSNEPIDCVLWKSIEDVVANDY NPNNVAPPEKRLLYTSLLRDGYTQPIVTAQIKDDDKDYVIVDGFHRRELAADRPKLRKRV RGYLPVVILNDLENEKSHRIAATIRHNRARGKHQISIMSDIVRELYRLGWSDEKISEELG MDADEVLRLKQISGLMELFQDREFSEAWTVK >gi|316920095|gb|ADCU01000002.1| GENE 185 186004 - 187227 695 407 aa, chain - ## HITS:1 COG:ECs1386 KEGG:ns NR:ns ## COG: ECs1386 COG3969 # Protein_GI_number: 15830640 # Func_class: R General function prediction only # Function: Predicted phosphoadenosine phosphosulfate sulfotransferase # Organism: Escherichia coli O157:H7 # 2 407 3 410 410 543 62.0 1e-154 MDALTNKKIALSIDVLKAAKSRIEWTFDTFSRVCVSFSGGKDSTVLLHLVAEYAKAHNRK FDVLFIDWEAQFTHTITHIEKMRRLYHTEIGTFYWVALPITTGNSVSQFQPEWQCWTPDI EWIRKFPADAISDTAFFPFYYDGITFEEFMPAFASWYSMQQPSAMMIGIRTDESYNRFWA VASKRKHRFADDKPWTTANISGHCYSIYPVYDWKTEDIWTYFASTGKAYNTLYDLMYQAG VALRSMRICEPFGPEQRQGLWLYHVLEPECWERVCTRVSGANTGGIYANNRGDFYARRQV HKPDNHNWRSYALFLLDSMPQKTAEHYRNKIAIYLRWYQTHGFPIDIPDEQEKDIGSKDI PSWRRICKVLLRNDYWCRSLSFSPNKPSSYERYHKRIQARRKCWSVI >gi|316920095|gb|ADCU01000002.1| GENE 186 187447 - 188568 950 373 aa, chain - ## HITS:1 COG:YPO1632 KEGG:ns NR:ns ## COG: YPO1632 COG2850 # Protein_GI_number: 16121900 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 373 1 373 373 616 78.0 1e-176 MDYQLDLDWHDFLQRYWQKRPVILKRGFKNFVDPISPDELAGLAMENEVDSRLVSHQDGR WQVAHGPFESYDHLGENNWSILVQAVDHWHVPSSALMRPFRKLPDWRTDDLMISFSVPGG GVGPHLDQYDVFIIQGTGRRRWRVGEKTPLRQHSPHPDLLQVEPFDAIIDEEMEPGDILY IPPGFPHEGYALENSLNYSVGFRAPSGRELISGFADFVLANELGSERYSDPDLVLRDNPS EVQAAELEKLRGMMMSQLQNQDNFNLWFGEFVSQSRHELDIAPPEPPYQVGEIYELLQAG ESLERLGGLRVINVAGSCFVNGEVIVTDHAAAAHVLAREYVINSAMLGDALEDPSFLATL AALINSGYWFFID >gi|316920095|gb|ADCU01000002.1| GENE 187 188746 - 190218 1000 490 aa, chain - ## HITS:1 COG:YPO1633 KEGG:ns NR:ns ## COG: YPO1633 COG0642 # Protein_GI_number: 16121901 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 12 487 7 482 484 711 73.0 0 MNLPRWAHYKAQPFSLRTRFLLATAAVVFMLSLAYGVVAVVGYVVSFDKTTFRLLRGESN LFFSLAHFENGKLTITSPPNFDLNAPTLVMIYDDKGKLLWSQRKVPELEKRIDKSWLEKP GFYELDSSTIFSSAVLGDNPKVQDQLKDYDDDDDDAMTHSVAVNQYAATDRLPALTIVVV DTIPQELQNSDMVWGWFTYVLIANILLVVPLLWLAAYWSLQPIKLLLTQVRELESGKREL LSENPPRELRGLVRNLNILLSNERQRYTRYRTTLSDLTHSLKTPLAVLQSTLRSLRNGKD LKIEQAEPIMLEQISRISQQIGYYLHRASMQSEHNMLNRELHSVPPLLDSLCSALNKVYQ RKGVDITLDISPELTFVGEKNDFMEVMGNVLDNACKYCLEFVEITAQQTEKELIIIIDDD GPGIPASKRDLIFRRGQRIDTLRPGQGLGLALVDELLQQYDGEAIITDSPLGGARMSIHF GRQQISHTLD >gi|316920095|gb|ADCU01000002.1| GENE 188 190218 - 190889 715 223 aa, chain - ## HITS:1 COG:YPO1634 KEGG:ns NR:ns ## COG: YPO1634 COG0745 # Protein_GI_number: 16121902 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Yersinia pestis # 1 223 1 223 223 366 85.0 1e-101 MRILVVEDNGLLRHHLSVQMRDMGHQVDAAEDAKEADFFVKEQTPDIAIVDLGLPGEDGL SLIRRWRAEQIKLPILVLTARESWQDKVAVLEAGADDYVTKPFHLEEVIARMQALMRRNS GLASQVITLPPFQIDLSRRELTVNENLIKLTAFEYTIIETLIRNHAKVVSKDALMLQLYP DAELRESHTIDVLMGRLRKKLQNEYPQEVITTVRGQGYRFDIN >gi|316920095|gb|ADCU01000002.1| GENE 189 190955 - 191581 556 208 aa, chain - ## HITS:1 COG:no KEGG:YPTB2433 NR:ns ## KEGG: YPTB2433 # Name: not_defined # Def: putative lipoprotein # Organism: Y.pseudotuberculosis # Pathway: not_defined # 1 207 1 207 207 201 51.0 2e-50 MFKQSLCAVAIISAMSGVALADDYTYVAGGLQVGGITNKSDFDKLVHQNRPDQSKTTMGG FYLRGGYGFENNVFIDARLNAMGNSQRASGDSLLGLGYHFAINPTTDMYALIGASGHAVS SNFDYDKKRDENWSSATGEIGVKSHITDKISMNAAYRYAEYDSRGFNEARIGAGYALTPN LAAEIGYTYHNWKVDDQIGEIGIRYTFQ >gi|316920095|gb|ADCU01000002.1| GENE 190 191897 - 193183 781 428 aa, chain - ## HITS:1 COG:PA2266 KEGG:ns NR:ns ## COG: PA2266 COG2010 # Protein_GI_number: 15597462 # Func_class: C Energy production and conversion # Function: Cytochrome c, mono- and diheme variants # Organism: Pseudomonas aeruginosa # 32 426 28 425 439 456 55.0 1e-128 MKTITLTQLAMLLLGTSSFCIQAAPTPLEQRIAHGEYLSRVGDCTACHTAPGGQPFAGGL KMTTPVGAIYSTNITPDRKNGIGEYSYAEFADAVRQGIRKDGSHLYPAMPYPSFVKINDD DLQDLYLYFQHGVKPVAQTNKDSDIPWPLNMRWPLAAWNMLFRHDGTYQVDTQQNTTWNR GAYLVQGLGHCGSCHTPRGIGFQEKALDQTESEYLSGGTLEGWHAANLRGDKVTGLGRWS VQDIAQFLKSGHTEKSAAFGSMTDVVQDSTQYLSHDDLQAIAVYVKSLKPVGDSAPEPTR DDKTYQALASGKVTQTGAQIYLDNCAACHRSDGLGYKNTFPALAHNPVVLSKDPSSLISI VLKGSHVPKTQSAPTGLTMPDFGWRLNDEDIAQLLSFVRTGWGNQADPVSASQVSDIRAD LSKADIKH >gi|316920095|gb|ADCU01000002.1| GENE 191 193198 - 194976 1138 592 aa, chain - ## HITS:1 COG:PA2265 KEGG:ns NR:ns ## COG: PA2265 COG2303 # Protein_GI_number: 15597461 # Func_class: E Amino acid transport and metabolism # Function: Choline dehydrogenase and related flavoproteins # Organism: Pseudomonas aeruginosa # 2 592 3 591 591 774 61.0 0 MTTIKKEPVDVVIVGFGWTGAIMGMEMTDAGLSVVALERGEKRDTYPDFAYPRIADELTY GIRLKLFQEASKETVTVRHNPGDYAVPYRQFGSFLPGNGVGGAGVHWNGMHWRALPSDLK MHTTVMERYGKSFIPEGMLLQDYPVSYDDLEPFFDKFEKVCGTAGKSGNLQGKIIDGGNP FEGPRMSEYPTPPLKQLYSGTLFSQAAKELGYHPFAIPAANCSQPYTNPYGVQLGPCNYC GFCERFGCFMYSKGSPQSTILPVLTQRKNFELRANSMVIKVNLDSSGKKATGVTYVDAQG REIEQPASIVILSAYQLHNVRLLLLSGIGTPYNPQTGEGMVGRNYAYQMNSGISVFFDKD TNFNPFIGAGAAGAVIDDFNSDNFDHSDLGFIGGAYISAVRTGGRPIQQMSLPAETPTWG AGWKQGIKDNYLHSMSIGSEGSVMPYKECYLDLDPNYKDDFGQPLLRMTFDWKPNEIKMT QHITSKMQGIATAMNPKQMKISVMDMNSHYDVRPYQSTHTTGGAIMGDNPSNSVINKYLQ SWDVPNVFVQGASAFPQNMAYNPTGLVGALAYWSAHAIRTQYLANPGPLVQA >gi|316920095|gb|ADCU01000002.1| GENE 192 194976 - 195707 447 243 aa, chain - ## HITS:1 COG:no KEGG:Spro_2016 NR:ns ## KEGG: Spro_2016 # Name: not_defined # Def: gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3) # Organism: S.proteamaculans # Pathway: Pentose phosphate pathway [PATH:spe00030]; Metabolic pathways [PATH:spe01100] # 1 243 1 238 238 310 63.0 3e-83 MSKPHEAMPSRRQFLKKTLTLIPLAAATGSGVVSFASAAQTASEKSPGVSQHYVPLYFNN EEWAFLLAACERLIPSDANGPGAVEQGVPVFIDKQMEAPFGRGGLWYMHPPFVSAVPELG YQSKLVPREVYRLGISEVNNYCRKQFKQRFAELSPDQQDQVLSNLEKDKPSFDSVSAKMF FDLLLQNTKEGYLADPIHGGNQTLASWQLIGFPGARADYTDWVDHPNEPYPQGPISISSK RTA >gi|316920095|gb|ADCU01000002.1| GENE 193 195982 - 196131 74 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKKTIASKGEGNMIVRFSSQYYFNGIIKVLRNERVLSPFVCKEIKCKL >gi|316920095|gb|ADCU01000002.1| GENE 194 196119 - 197369 1180 416 aa, chain + ## HITS:1 COG:STM2142 KEGG:ns NR:ns ## COG: STM2142 COG0477 # Protein_GI_number: 16765471 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 10 414 6 410 423 497 66.0 1e-140 MQTVNNNNTKLSVMMFVEWFIWGAWFVPLWQYLNKLGFSPSEIAWSYSSTAIAAILSPVL VGVIADRYFAAQKVLGWLHIVGGGLMLLLAWQIQFSTFFPLLVVYALTYMPTVALTNSIA FANIRDTEKDFPRIRVLGTLGWIASGLVVGFVLPPLLGMENVSDTNLPLIVTAIASVLLG LYSFMLPNTPPKVGQRTDIKDLLGLNALGLLRDRSFAIFALCSFLFCMPLAFYYQFANGY LTQVGLQNATGWMTLGQVSEIFAMLALPFLLKRYGIKKVLLLGFVTAGIRYVLFIYGGTA DMLMYSMLFIGILLHGVSYDFYFVTGYIYVDKKAPAHMRTAAQGLITLICQGFGSFIGNW LGGRAMTAFQLPEAHNGMTFDWFTVWGVGAAMVFAVMLLFVLFFREKSKEIGQIAL >gi|316920095|gb|ADCU01000002.1| GENE 195 197447 - 198487 805 346 aa, chain + ## HITS:1 COG:yegU KEGG:ns NR:ns ## COG: yegU COG1397 # Protein_GI_number: 16130037 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Escherichia coli K12 # 15 345 4 334 334 441 66.0 1e-124 MTLQVSAGKDLTIQQRILGALYGQMLGDSLGMPSELWPRSRVRSHFGWIDRFLDGPQENS AACYFSAGQFTDDTSMALALADALLEANGKVVPELIARNVIRWVDSFDAFNKNILGPSSK VALREQKEGKPISSLENNGVTNGAAMRVSPLGCVLPSAPLRTFVDQVWEASSPTHKSDIA VAGAVVIAWSVSKAIEGASWAEIKTALPAVAAYAQEFRPSTFSASLAARIELALSVVAHA DGIEDASERVYQLVGAGVSTIESVPAAIAMVDLANGCPNRCAELCANLGGDTDTIGAMAT AICGALQGVDAIKKAWLDTLKKTNPIDMTRYSRAFEQFRAQWQEIK >gi|316920095|gb|ADCU01000002.1| GENE 196 198487 - 199434 604 315 aa, chain + ## HITS:1 COG:ECs2903 KEGG:ns NR:ns ## COG: ECs2903 COG0524 # Protein_GI_number: 15832157 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 5 311 6 314 321 253 43.0 3e-67 MKPWLNQFVEQRKQAQPVMVLGASVMDVVAETDRLPERGGDQPAFERGVHLGGCALNIVL ALHRLEVNCTPMLPVGEGMWADRLRAEMARKGIESQLNVSGGDNGWCLALVEPDGERTFI SFDGIENQWQPHWLESMQPTSGFVSVSGYQLSSPSSDVLINWLQHLPVEVKVVIDFGPRL DRIAPQTVQQLLRPGVILTLNEREAKLLGMQGDDVVAFCHRLYELTHELVVVRMGDAGCY YQRSHDDAGWVEPCRVQVVDTIGAGDSHCAGLLAGLASGLTAKDSLILANHVAAYVVSFR GGDCAPTVGELTTFF >gi|316920095|gb|ADCU01000002.1| GENE 197 199477 - 199815 313 112 aa, chain - ## HITS:1 COG:STM3907 KEGG:ns NR:ns ## COG: STM3907 COG5606 # Protein_GI_number: 16767183 # Func_class: S Function unknown # Function: Uncharacterized conserved small protein # Organism: Salmonella typhimurium LT2 # 1 111 1 111 113 105 50.0 2e-23 MADHIDVKSRHLTPADGNIFTELGFSSVTATQLQAESLAQISAELEMKVMLMVEITQWIT TNNLKQSAAAEILNISRPRVSDVVNQKTDKFTIDSLVGMLTMTGKRARLIIE >gi|316920095|gb|ADCU01000002.1| GENE 198 199808 - 200209 198 133 aa, chain - ## HITS:1 COG:XF1573 KEGG:ns NR:ns ## COG: XF1573 COG4679 # Protein_GI_number: 15838174 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Xylella fastidiosa 9a5c # 23 127 5 109 112 111 47.0 3e-25 MHTSKRTFIAITLSGLHISPVVKPIDWRGSSRKTLISFSESVKKIAGFELHRVQHGLEPR HWKPRNDLGAGVTEIRINEDNNQHRIIYVATFHECIYVLHCFVKKTQKTSQKDNEIVALR YQEILKERSLKHG >gi|316920095|gb|ADCU01000002.1| GENE 199 200507 - 201268 666 253 aa, chain - ## HITS:1 COG:STM2145 KEGG:ns NR:ns ## COG: STM2145 COG2188 # Protein_GI_number: 16765474 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 8 253 7 248 248 186 38.0 5e-47 MSAENSQQLLNKLQQDIAQTGSMPIYLRFNESLREAIDQGIVKPGDFLPSERAFTDALKI SRITVRKALACLEQDDIIGRGRGFGTMVKNVPTPPLAYSLATIKGFSGEVNLQGRIPGSV WLKRERVVASVSVAEKLSIPQNSPVFRLERIRTVDHSPVSVAISYVVEDAIDDVEQIGNS LYDYLRSRRIQFGKLYSQISACLADNELREKLLIKEPSAMLVIRQTLLDHELRPLEYSIN YCRGDMYEYSTED >gi|316920095|gb|ADCU01000002.1| GENE 200 201465 - 202835 1394 456 aa, chain - ## HITS:1 COG:YPO1636 KEGG:ns NR:ns ## COG: YPO1636 COG0015 # Protein_GI_number: 16121904 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Yersinia pestis # 1 456 1 456 456 860 89.0 0 MELSSLTAVSPIDGRYGDKVTALRPIFSEYGLLKFRVQVEVRWLQKLAACAEIREVPSFD ADANAYLDKIVAEFSEQDAQRIKTIERTTNHDVKAVEYFLKEKVAEVPALHAVSEFIHFA CTSEDINNLSHALMLNTAREEVIKPQWRKIIDAIAGLAQEYRDIPLLSRTHGQPATPSTV GKEFANVAYRMERQFRQLEKVDILGKINGAVGNYNAHLVAYPEVNWHQFSEEFVTSLGIQ WNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDIWGYIALSHFKQKTIAGEIGSSTMPH KVNPIDFENSEGNLGLSNAVLGHLASKLPVSRWQRDLTDSTVLRNLGVGLGYALIAYQST LKGISKLEVNRDHLLDELDHNWEVLAEPIQTVMRRYGIEKPYEKLKELTRGKRVDAAGMQ AFIDGLALPDEEKTRLKAMTPANYIGEAITLVDKLK >gi|316920095|gb|ADCU01000002.1| GENE 201 202906 - 203532 512 208 aa, chain - ## HITS:1 COG:YPO1637 KEGG:ns NR:ns ## COG: YPO1637 COG2915 # Protein_GI_number: 16121905 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in purine metabolism # Organism: Yersinia pestis # 1 207 1 207 208 309 81.0 3e-84 MAKNYYDITLALAGICQSARLVQQLAHEGQCDNTAMRTSLNSILQTNPPSTLAVFGDHER DLKLGLETLLNVLNANRQGPGAELTRYCLSLMVLERKLFANNSAMQTLSERISVLDRQLA HFDLESETIVSSLASIYVDVVSPLGPRIQVTGSPTILQNPLIQAKVRAALLAGIRSGILW QQVGGGRLQLMFSRNRLFQMAQNLLTHC >gi|316920095|gb|ADCU01000002.1| GENE 202 203702 - 204760 727 352 aa, chain - ## HITS:1 COG:PA2870 KEGG:ns NR:ns ## COG: PA2870 COG2199 # Protein_GI_number: 15598066 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Pseudomonas aeruginosa # 170 348 341 519 525 126 36.0 8e-29 MNPLQSLDVLYINACVTYASLSVTYFVLSKQNALSATSSLSRRILFGLVAGLISLYLTRS KMYFTSEVYYSFEIVPMLLVTFFGGGIAGITAWFVNFATTGGFVLDNLLLAVMLIPLLLA RVWKRNTFRTYLKTIILITLYRIVVVLPFLHTQGNVIDILVYQAVSFLCLLVCYQTLSIK RRSVDAFFKVRAESLRDAMTKVHNRQSLELQLQALSKSRTPCCLVMIDIDNFKLVNDTYG HLAGDQVLVEVAELMNLITRSSDFIARFGGEEFAIIIHHDDLNRAFQICERIRLSISNRK FFLSHGPKIHVTASFGISLYDGKTSTVEETLNRADNALYQAKHTGKNKVVLG >gi|316920095|gb|ADCU01000002.1| GENE 203 204920 - 206023 1095 367 aa, chain - ## HITS:1 COG:YPO1638 KEGG:ns NR:ns ## COG: YPO1638 COG0482 # Protein_GI_number: 16121906 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Yersinia pestis # 1 364 1 364 371 688 88.0 0 MSDNSQKKVIVGMSGGVDSSVSAYLLQQQGYQVAGLFMKNWEEDDNEEYCSAATDLADAQ AVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL GADYIATGHYVRRRDIDGTTQLLRGVDTNKDQSYFLYTLSHEQVAQSLFPVGELEKPEVR KIAEQLDLATAKKKDSTGICFIGERKFRDFLGRYLPAQPGKIMTVDGEEIGQHQGLMYHT LGQRKGLGIGGTKDGGEDPWYVVEKDLENNVLLVAQGHDHPSLYSQGLIAQQLHWVDRKT VTEPFRCVVKTRYRQPDIACTVTPIDDERIEVRFDEPVAAVTPGQSAVFYIDEVCLGGGV IEQRIID >gi|316920095|gb|ADCU01000002.1| GENE 204 206174 - 206857 446 227 aa, chain - ## HITS:1 COG:mll4823 KEGG:ns NR:ns ## COG: mll4823 COG5343 # Protein_GI_number: 13474038 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 9 226 19 242 244 85 30.0 5e-17 MIPRSEHLDHLAGEYVIGTLRGSARTRFEQWLAQDPELQIRVLRWQNGLAPLDELYRPIQ PPAHVWQNISKRLDIESDNVTSIQSHWLKRHGWIGITALAAACLLLVLLPRTLVKPSTPP AEVAVLAAQDNGMRWLVSLNPNSHALTLMPPRGLNIPSNRSLELWAIPQGGKPISLGIIS NSALSAVSALGKPIINGSLLAISLEPRGGSPTGQPTGKVLFSGSIQL >gi|316920095|gb|ADCU01000002.1| GENE 205 206854 - 207417 362 187 aa, chain - ## HITS:1 COG:RSc2361 KEGG:ns NR:ns ## COG: RSc2361 COG1595 # Protein_GI_number: 17547080 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Ralstonia solanacearum # 5 186 29 211 213 134 40.0 7e-32 MNSDDIENLTRLIQEAARGNRAAFEELYRQTSPRLYSVALQILKNAAWAQDILQESFITI WHKAASYQPGLSSPQTWLTHIVRNRAIDGLRTGNARYEITGDDELDTLVSSAFVNDDPLQ HIHDGVQNLRLKQCLSGLPSDQQQTVVLAYYQGMSHAEVSEFLRQPLGTIKSWIRRGLEQ LKGCLGL >gi|316920095|gb|ADCU01000002.1| GENE 206 207480 - 208064 605 194 aa, chain - ## HITS:1 COG:AGc835 KEGG:ns NR:ns ## COG: AGc835 COG2335 # Protein_GI_number: 15887818 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Secreted and surface protein containing fasciclin-like repeats # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 38 194 61 216 217 174 64.0 6e-44 MKMFTRTLLCTSLLVCGASALAQNMNEASMMSGGTTMVGGAAMYPQKNIVENALNSKDHT TLVAAVKAGGLVDTLQGKGPFTVFAPTNAAFAALPAGTVETLLKPENKAKLVAILTYHVV PGALDMKSLEKKIHAGHGQTMLKTVNGQEIWLMQNGPHNIQIKDANGGVANISTYDVQQK NGVIDVIDKVLLPK >gi|316920095|gb|ADCU01000002.1| GENE 207 208257 - 208724 452 155 aa, chain - ## HITS:1 COG:YPO1639 KEGG:ns NR:ns ## COG: YPO1639 COG0494 # Protein_GI_number: 16121907 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Yersinia pestis # 1 146 1 146 148 206 69.0 2e-53 MLKPHVTVACVVQSQDRFLIVEETVHGKPTWNQPAGHLEANETLLEAAVRELWEETGVRA QPQHLLQMYQWVAPDNTPFLRFTFAIDLPEQPETQPQDDDIDRCLWLTADEIIHSDRLRS PLVRESILRYQRPERYPLEILATFGWQSKPPVTTI >gi|316920095|gb|ADCU01000002.1| GENE 208 208734 - 209669 407 311 aa, chain - ## HITS:1 COG:no KEGG:ESA_01756 NR:ns ## KEGG: ESA_01756 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 23 300 28 298 306 191 40.0 3e-47 MYQRTLVAIVLCGISSLCFAQTDCDAIAGMAAGEASYRNDAAQVKASDTRLHFYSAPASD CQLPAFLVHGNTVEILRDSVRYTESGGIDDASKRPFYYVRYRDAKGVFATGWIIAAALVP LANPLPVPPACQKWANSTMPTRKSMAPASDNHYQIQGSERVWFYSMPNEQCRSNTVFLVE GDTIATQEQSDDDFVESVYYTADHRIVRGWLKKSRLQPLNSGDSYRDDINPLSTDKASRV ITLALRNDYQCTFYESWNDEKNIQIKVREDHQSDQCRGAGDPETSPAVAYIDINKQSGKI TWPDLFDDTEE >gi|316920095|gb|ADCU01000002.1| GENE 209 209778 - 210413 373 211 aa, chain - ## HITS:1 COG:YPO1640 KEGG:ns NR:ns ## COG: YPO1640 COG1187 # Protein_GI_number: 16121908 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Yersinia pestis # 5 209 1 205 208 321 74.0 7e-88 MMNTMSKFPVRNHKVNRFSTRSAAAVKRPRGPRKVVIFNKPFDVLPQFTDEAGRSTLKDF IPLTDVYAAGRLDRDSEGLLVLTNDGKLQAQLTQPGQKTGKVYYVQVEGVPDDAALAQFR QGLELKDGMTLPAGIEIVAEPEWLWPRNPPIRERKSIPTAWIKVILFEGRNRQVRRMTAH IGFPTLRLIRYSMGDYTLDNLANGEWREMPA >gi|316920095|gb|ADCU01000002.1| GENE 210 210631 - 211884 1513 417 aa, chain + ## HITS:1 COG:YPO1641 KEGG:ns NR:ns ## COG: YPO1641 COG0538 # Protein_GI_number: 16121909 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Yersinia pestis # 1 417 1 417 417 801 93.0 0 MESKVVVPAEGKKITVDAQGKLVVPHNPVIPFIEGDGIGVDVTPAMIKVVDAAVNKAYKG ERKISWMEIYTGEKSTQVYGKDVWLPEETLDLIRDYRVAIKGPLTTPVGGGIRSLNVALR QQLDLYICLRPVRYYQGTPSPVKQPELTDMVIFRENSEDIYAGIEWKADSAEADKVIKFL RDEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAITNDRDSLTLVHKGNIMKFTEG AFKDWGYQLAREEFGGELIDGGPWVKIKNPKTGKDIIVKDVIADAFLQQILLRPAEYDVI ACMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILS AEMMLRHMEWFEAADLIVKGMEGAIAAKTVTYDFERQLEGAKLLKCSEFGDAIIKHM >gi|316920095|gb|ADCU01000002.1| GENE 211 212273 - 212731 191 152 aa, chain - ## HITS:1 COG:elaA KEGG:ns NR:ns ## COG: elaA COG2153 # Protein_GI_number: 16130202 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Escherichia coli K12 # 3 147 2 146 153 144 48.0 5e-35 MEISWKALRGSSLSARQLHDILALRIAVFVVEQTCPFQDIDGQDLPESTLHVAGYSNEKL VAYARVLHVDDSPDAAKITRVIVDDTFRGQRLGARLMEETMSLIHDHAPRKAIKLSAQSH LVRFYEGFGFKTASSEYLDDGIPHKDMVYTDA >gi|316920095|gb|ADCU01000002.1| GENE 212 213220 - 213381 81 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKYVFALMLGMGLSGCTANDWVDAASGIMQATEKQEQDARNKRIKAANKAAGY >gi|316920095|gb|ADCU01000002.1| GENE 213 213596 - 213874 176 92 aa, chain - ## HITS:1 COG:no KEGG:ROD_14901 NR:ns ## KEGG: ROD_14901 # Name: not_defined # Def: putative outer membrane protein # Organism: C.rodentium # Pathway: not_defined # 1 92 7 98 98 100 73.0 1e-20 MHIDTKLRLASLFYLIVAYAIALPLMALFTDLVITGSIIDIWRGSYSFAELLSFRKILFL KFAGLGAVLGFFYWLFFYRKYRHHDPLDKYFK >gi|316920095|gb|ADCU01000002.1| GENE 214 214045 - 214551 469 168 aa, chain - ## HITS:1 COG:VC2240 KEGG:ns NR:ns ## COG: VC2240 COG3479 # Protein_GI_number: 15642238 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phenolic acid decarboxylase # Organism: Vibrio cholerae # 4 164 3 163 174 235 60.0 3e-62 MSNFDKHDLSGFVGKHLVYTYDNGWNYEIYVKNEQTLDYRIHSGLVGNRWVKDQRAYIVR VGKDIYKISWTEPTGTDVSLIVNLGDKLFHGTIFFPRWVMNNPEKTVCFQNDHIPLMNQY RDTGPAYPTEVIDEFATITFIRDCGANNDDVIACAASELPENFPDNLR >gi|316920095|gb|ADCU01000002.1| GENE 215 214649 - 215509 545 286 aa, chain + ## HITS:1 COG:PA3225 KEGG:ns NR:ns ## COG: PA3225 COG0583 # Protein_GI_number: 15598421 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 3 284 5 291 309 155 38.0 7e-38 MNRTTLEQWAILDCVFTTGSFARAADTLHRSQSSISYNLAQLQTLLGVTLLVPEGRRTVL TPTGVTLLRQVRPLLKTFSYVEAQAATLQEGMRSQLNLVVDVIYPRERLFSALQQFQQRW PHIRVRLTEVTESMFPTMPAVDDADVMIVTDRQNITGRGEWLMNVDFIAVAHRDHPLLSV SGTLTEALLGNWPRVQIADGGKTASGDSHNWDFSTLDAAAGAVVAGLGYGWLPQAYIHQQ LAAGILKPLPLSHGTHRVTPLHIILRQDVPPDEPVSFLISALKTAL >gi|316920095|gb|ADCU01000002.1| GENE 216 215690 - 216229 569 179 aa, chain + ## HITS:1 COG:yaiL KEGG:ns NR:ns ## COG: yaiL COG3122 # Protein_GI_number: 16128339 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 179 40 218 218 253 86.0 1e-67 MTKLTLQEQMLKAGLVTSKKMAKVQKTAKKSRVQAREAREAVEENKKAQLERDKQLSEQQ KQAALSKEYKAQVKQLIEMNKIDISKGDIGFNFTDNNVIKKIEVDKVTQAQLISGRLAIA RLVIDSSGESQYAIIPASVADKIAQRDASSIVLNSALSQEEQDEDDPYADFKVPDDLMW >gi|316920095|gb|ADCU01000002.1| GENE 217 216489 - 216971 411 160 aa, chain + ## HITS:1 COG:no KEGG:ECA1580 NR:ns ## KEGG: ECA1580 # Name: not_defined # Def: putative cold-shock protein # Organism: E.carotovora # Pathway: not_defined # 1 160 1 160 160 283 93.0 1e-75 MAMNGTITTWFKDKGFGFIKDENGDNRYFHVIKVANPDLIKKDAAVTFEPTTNNKGLSAY AVKVIPESKYIYIAGERLKLTSIKSYLVYSEEVPADSRIDKENTVLSVGILMNNIKPKSA AKPDEMRTLKKLAITTFQGETLIFSEDEIDVDATVKLLKV >gi|316920095|gb|ADCU01000002.1| GENE 218 217149 - 217745 32 198 aa, chain + ## HITS:1 COG:Z2984 KEGG:ns NR:ns ## COG: Z2984 COG1045 # Protein_GI_number: 15802336 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Escherichia coli O157:H7 EDL933 # 15 196 27 201 201 108 41.0 7e-24 MKLFFVFLYLISNINSDLRKSWETEILKGKYKFSWLRLFKEYRKSKKSTNMNAIFWFWWR LANAMYLSGNRNYKKVAKRINRDLISNFNVDIMLGAIIGDNPWINHFSNVVITNFAVIGN NASIKQGVTIGVKNINGSHYSINIGNNVDIGANACIISDVIKIGNNVTIGAQALVLSDIP DNSIYINKITPVLLQKKL >gi|316920095|gb|ADCU01000002.1| GENE 219 217984 - 218403 265 139 aa, chain + ## HITS:1 COG:STM1998 KEGG:ns NR:ns ## COG: STM1998 COG1974 # Protein_GI_number: 16765334 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Salmonella typhimurium LT2 # 1 135 1 135 139 138 53.0 2e-33 MKFYPATVSLQAIPLPLYDDRVPAGFPSPAADYIDKPIDLNELLIAHPAATYFVRVAGDS MVGIGIFDGSLLLVDSSIRPKHNDIIIACLGGEFTVKRYVTHPRTRLLAENPAYPPIELH EGEDLETFGVVKFVINEAR >gi|316920095|gb|ADCU01000002.1| GENE 220 218403 - 219671 273 422 aa, chain + ## HITS:1 COG:umuC KEGG:ns NR:ns ## COG: umuC COG0389 # Protein_GI_number: 16129147 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli K12 # 1 416 1 418 422 580 65.0 1e-165 MFALVDVNSFYASCETAFRPDLCGQPIVVLSNNDGCVIARSVEAKKLGITMGTPYFKLRQ LCEQHGVHVFSSNYSLYGDMSRRVMSLLEEMAPQVELYSIDEAFLDLRGVNHCRDLDGYG REIREKIWWGTHLTVGVGIAPTKTLAKLANHAAKQWGKTGGVVVLTNELRQRKLMALMPV ETIWGVGRRLSKSLRTIGVDTALKLADMNLAYVRRNYSVVLERTVRELRGESCLGIEEML PTKQQILCSRSFGHHITEYQDMKEAICSYAERAAEKLRGESQFCKHVSAFIKTSPFAERH PYYGNSASAQLETPTNDTRDIVKQALACLAKIWQPDKRYQKAGVVLGDFYDQGVLQLNLF DEFGPKPNSEALMNVLDEINKKGRGRVWFAGQGIQKGWQMKRSMLSPAYTTRFSDLPIVM AH >gi|316920095|gb|ADCU01000002.1| GENE 221 219735 - 220187 271 150 aa, chain - ## HITS:1 COG:no KEGG:ETAE_1314 NR:ns ## KEGG: ETAE_1314 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 145 44 188 198 151 57.0 6e-36 MGFTPTQQVRSDLLTEFFTWMHIAIGITLLCLCVALVVYCLATRGFRYFYPYLWGDFTQI RRDLKTITRLKLPESEPRGLATCVQGLGLGALSLVVISGFTWFVLWRLNSAWAVDMKDIH KSLTGLIEFYIVAHGSMGILHFIMWRFGKQ >gi|316920095|gb|ADCU01000002.1| GENE 222 220687 - 221034 330 115 aa, chain + ## HITS:1 COG:no KEGG:SEN1365A NR:ns ## KEGG: SEN1365A # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Enteritidis # Pathway: not_defined # 1 111 10 120 121 141 57.0 9e-33 MPTFLTSFIFDKKEYDDEFYALDAKIEAFTQATPGFIGMESYADPKTGRVINNYYWSSRS AMELLMKNVEHLKAKELSGKWIAGYQVIIAKIEGAHNDNMSHPLSEIKMRYQGEQ >gi|316920095|gb|ADCU01000002.1| GENE 223 221180 - 222106 264 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily [Haemophilus influenzae R2866] # 8 300 6 285 290 106 27 1e-21 MPYFLLSLAACFWGGNYVVGHLLVAHADPIVLSAARWIFTALLLLALYFRQVKAQWPAMK KSFSTIAFLALCGQVLFPLTLYIGLQYTSSLNAAIYLSTTPAMVLLINRFIFREHISSRN IAGVALSSLGVIWLILQGDIAHADILKKLNRGDLWTMGSAISWAIYCAFLRIKPAEVRGN AFVTVSAVLGALVLIPVLLISIAENGLPDMSAYTQPTFLSGLIYLIIFPSWLSYLLWNKG ITTIGATRGEIFSHLIPLSGGVFSLLFLHSPLHTYHGISALFIIGGIALCSRAKHPLPKL DNHVSTIE >gi|316920095|gb|ADCU01000002.1| GENE 224 222211 - 223116 461 301 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 1 295 1 291 305 182 33 2e-44 MNFTLRQLEFYIALAETLQISKAASRCHISQSSMTVSMRNLEDALNSQLFIRHPKGVSLT SAGERFLSHARKIIADSHAALEELHNQPELASGTVRIGLAETLSAYLIPTILSDIQNRFP LMEIIFEEATSPVLVNALRENQLDFCLLLTSNIKHDDDLKIETFIRSPRKLWTPIGHPLQ SQSVVNLSDVEKSPFLLLITDEYPEVIQDYWQARGCVPDIQFRTNSFEAIRSLVAQGKGV TILSDLVYRPWSLEGLRVMRRTIDDCVTYMDVGVVSTLSKPFSPDCQRLVDFLRQRITRL N >gi|316920095|gb|ADCU01000002.1| GENE 225 223202 - 223405 148 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQVPQHFCRKKRDMILTRFTVGDAMRLLKEIFRSRLVGYLVGLLAAIAFGFNPIEVPEED EKLTRDK >gi|316920095|gb|ADCU01000002.1| GENE 226 223471 - 223914 358 147 aa, chain - ## HITS:1 COG:BS_yhfO KEGG:ns NR:ns ## COG: BS_yhfO COG0454 # Protein_GI_number: 16078095 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Bacillus subtilis # 1 142 1 142 149 116 42.0 2e-26 MKLFTAQLQDVQKILPLYLGYRAFYQVDESAEKAEKFLTERMRNHESVIYFVEKDGMPVG FAQLYPLFCSLEMKRIWLLYDLFVAPEARKEGVAQMLLARADQLATETDSAFIMLSTATD NVRAQALYEKEGYVRDTQFFVYNKMVS >gi|316920095|gb|ADCU01000002.1| GENE 227 224216 - 225667 683 483 aa, chain + ## HITS:1 COG:RSp0303 KEGG:ns NR:ns ## COG: RSp0303 COG0840 # Protein_GI_number: 17548524 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Ralstonia solanacearum # 226 483 257 514 515 178 43.0 2e-44 MATVTILHSRNEPSEMVSLEQIYRRADLLMFFLVWGLLVISAGVGWYYDHLTTALIVGSI LAFSSSLIKFLFPGKLITRLFFAFILLAFAALLIQLGEGETEFHFSVFVLLSALLAYRDY RPLLIGAATAAVHHLLFNYLQENDLYGIVCFMHPGLHMVIFHALFVVAQTAMLIFIAVNM ARDARSASEVAQLAAHINRESGCLTLDNEAPINHSPFARTFSTTLNTMRHTLAQVSRGIS MVQGGSESLMRQNSALSQRTEEQASALAVVASAMEQLTSVSAHTSEKALLAQELSAKVTA VAACGGESITSAIHTMAQIKEESLRIGNILEIIDGIAFQTNILSLNASVEAARAGEHGKG FSVVASEVRMLALSCENAAKEIRQLIAVSMDCTQKGSSQVAAAGETMQEVMRAIGRLAQL VDELSTMSVQQRASISQMHTSITSIDASVQENVNHVAETVRVAQQQGHQADALKQAISVF RLA >gi|316920095|gb|ADCU01000002.1| GENE 228 225718 - 226245 187 175 aa, chain - ## HITS:1 COG:STM0606 KEGG:ns NR:ns ## COG: STM0606 COG0583 # Protein_GI_number: 16763983 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 2 163 131 293 300 77 30.0 9e-15 MHYTLTEEMKVDELLINRQADLIFDIHPTTSHSVISIPFSSEPLSLVCSANHPRLKGNVD FSELSAERFCGLHSAIPYIMRRQVEFSRILEGRNFIFSSDSVMALLSIIENTESIGIMPS SLLAESCGAKIQAIDAGLYLEPITFYFLYNKHSAHTSGFSQFLTIVNQLSTVSSK >gi|316920095|gb|ADCU01000002.1| GENE 229 226960 - 227304 361 114 aa, chain - ## HITS:1 COG:AGc4218 KEGG:ns NR:ns ## COG: AGc4218 COG2076 # Protein_GI_number: 15889596 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 114 1 114 114 107 57.0 4e-24 MSPVFITYGALAFAIVCEVIATSILPHTKEFTRPGLTLVMALLYATAFYMLSIATRTMPI GIAYAIWSCLGIVLIAGANYVLFKQTLDFPAMLGLVFIIAGVLIINLFSRSVSH >gi|316920095|gb|ADCU01000002.1| GENE 230 227708 - 227887 200 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MALMTKVLDIFKSKQAFVVCQECHHKGRFDEFKIEDSIMMHCPHCHYSFNRKRHKLSSI >gi|316920095|gb|ADCU01000002.1| GENE 231 228170 - 228580 291 136 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSNKNRQLYDLSDWPLVKVSAEFMCFLGNDWVVQTERLLAQNRPFVLIYPEVNVVAQPDE SSAGGESARDARTIIAKWLKIHRNDFSQRCRGIVLSASGETASHLVSGLERMYGVPVKAA KAEQTMNLAKEIMGIS >gi|316920095|gb|ADCU01000002.1| GENE 232 228610 - 228981 351 123 aa, chain + ## HITS:1 COG:STM4586 KEGG:ns NR:ns ## COG: STM4586 COG2207 # Protein_GI_number: 16767827 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 5 105 6 104 289 105 49.0 2e-23 MSEVIVSDLIQWLEGQLQLSEAIKVDAIAAKSGYSKWYLQREFKQKKGLSIAEYVRKRRL HEAATLLCASELPIIDIALKYGFSSQQTFSRVFRAHFNTSPAKFRDQRLYPKLDEVMEMN KKH >gi|316920095|gb|ADCU01000002.1| GENE 233 229539 - 230039 284 166 aa, chain + ## HITS:1 COG:no KEGG:ETAE_1906 NR:ns ## KEGG: ETAE_1906 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 4 166 30 183 183 169 48.0 2e-41 MYTVNGLAVDEIQEAPETLTIKEQDVAKVVIGMLRYTRWTSSPDPIKLCIVPPARYARLL TESTITLPSRRVDAKVVDFSPTKLLEQCDAVYFGNIKPDDQELIIQSMQGKSILTIAEDN KECLRGSAFCLRIDNSGVAFDLNLDILARSNVQVNPNVLLLAKRKG >gi|316920095|gb|ADCU01000002.1| GENE 234 230044 - 231270 722 408 aa, chain + ## HITS:1 COG:YPO0449_2 KEGG:ns NR:ns ## COG: YPO0449_2 COG2199 # Protein_GI_number: 16120778 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Yersinia pestis # 216 401 1 190 211 172 48.0 1e-42 MRFTFFSNANMPKSRPTLRSMFQRIHLMIIAITLLMAGIPLSVLSVFTLKSYAEHNLQLV AATISYTSAAAVVFGDKPAAQDALTLIAKKEQVYEARIYDQKKELLASWTSPTSMRLTLD DPIRKWLLPKMVVQPVVSENEVVGYVTLTAGGATMVKFLSNLLLGLLSCLVITALLSFWL VRRMHTGIVDELQNIAHVARLAREKREFSIRVRPSQIAEINELSRGFNSLLREMELQHAD LMIENDQLSYKALHDPLTSLPNRSNFMSMLESMNMMQEQICVMFLDGDGFKAVNDTWGHS AGDHVLTTIAERLKTLVGKNDLVARMGGDEFSILLRHVVDQDDVMQVIEKILKAMRRTIY LPNGEEVFVSLSIGFTLSNAGSTPAELLEKADAAMYHSKHNGGGWSFS >gi|316920095|gb|ADCU01000002.1| GENE 235 231305 - 231790 187 161 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 21 156 198 344 347 76 32 9e-13 MRLHTQWKWVGIILAVLFLAGCQHKGGLTAEQIAVLKEQGFHQTDEGWMFGLSEKVLFGN NKSNLTPESTETVKKMGKTLAQINILHARLDGFTDNYGDESYNQQLSLKRANTVADALSQ GGIPRMNLTTRGMGESHPIASNSTKQGRSENRRVAIVIEAP >gi|316920095|gb|ADCU01000002.1| GENE 236 232363 - 233865 1282 500 aa, chain + ## HITS:1 COG:STM4290 KEGG:ns NR:ns ## COG: STM4290 COG0477 # Protein_GI_number: 16767540 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 3 500 2 499 500 821 79.0 0 MRLRRKQAKPLHINDITIIDDEKLKKAITAAALGNAMEWFDFGVYGFVAYALGQVFFPGA DPGIQMIAALATFSVPFLIRPLGGLFFGALGDKFGRQKVLSVTIIIMAVSTFCIGLIPSY ASIGIWAPILLLLAKLAQGFSVGGEYSGAAIFVAEYSPDRKRGFMGSWLDFGSIAGFVLG AGVVVLISSIVGEQDFLDWGWRIPFFIAAPLGLIGLYLRHALEETPAFQQHVDKMEQDDR NAIQNPPKTSFKTILAQHWKSLLTCVGLVISTNVTYYMLLTYMPSYLSHNLHYSEDHGVL IIIAIMIGMLFVQPVMGLMSDRFGRKPFIIFGSIGLLLLAIPCFKLINSDIIGLIFLGLL ILAILLNAFTGVMASTLPAMFPTHIRYSALAISFNISVLIAGLTPTIAAWLVETTNNLYM PAYYLMIVALIGLATGLFMKETANKPLRGATPAASDRAEAKELLQETYDNIEQKVEDINE QIEELERKKQRLIDQHPKLD >gi|316920095|gb|ADCU01000002.1| GENE 237 234050 - 234193 134 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNAKRVKIAQSVAKYAVAHHSSSRWNTAMKMLKASISVAVVLPRSEL >gi|316920095|gb|ADCU01000002.1| GENE 238 234275 - 234553 305 92 aa, chain - ## HITS:1 COG:no KEGG:Spro_2355 NR:ns ## KEGG: Spro_2355 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 84 1 84 93 67 42.0 1e-10 MGTVMTGLIVARWEIMSTFMMFVASSLNIKFRKKGHSLVAFAFSGIGFATACWLVMTLTG ATINTDGMSHFWAVAKDVFVDVMSQPSAYSMM >gi|316920095|gb|ADCU01000002.1| GENE 239 234726 - 235619 734 297 aa, chain + ## HITS:1 COG:STM2393 KEGG:ns NR:ns ## COG: STM2393 COG2116 # Protein_GI_number: 16765720 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Salmonella typhimurium LT2 # 3 297 2 294 313 410 67.0 1e-114 MNDEPHKDRIVDEKPESELKVDNDEEKQGKEINTDEDRLPSRAAAVHEIIRMEGTKELER DVWALLWSAVAAGLSMGASLMAKGIFHVKLDGVPGAFLLENFGYTLGFIIVIMARQQLFT ENTLTAVLPVMNKPNRTNFLLLMRLWGLVLLGNLIGTGLVAFIFWHLPVFDVQTREAFVS ISQKVMENSPTEMFANAVVSGWIIATMVWMFPSAGAAKIWVIVIMTYLVAIGDLTHIVVG SVEILYLVFSGHLHWQEFIYPFAVPTLIGNIIGGTFIFALISHAQIRSELDKSKDKK >gi|316920095|gb|ADCU01000002.1| GENE 240 235718 - 236392 501 224 aa, chain + ## HITS:1 COG:STM1521 KEGG:ns NR:ns ## COG: STM1521 COG2095 # Protein_GI_number: 16764866 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Salmonella typhimurium LT2 # 1 221 1 221 221 333 85.0 1e-91 MIELFKAIGLGLVVILPLANPLTTVALFLGLAGNMNREERNRQSLMASVYVFAIMMVAFY AGQVVMNTFGISIPGLRVAGGLIVAFIGFRMLFPQQKMEDQPEVESKSEELNKHPTANIA FVPLAMPSTAGPGTIAMIISSASTIKHGADFPDWVLMVAPVLVFLSVSVILWGCLRSSGA IMKLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIVTTFHAPI >gi|316920095|gb|ADCU01000002.1| GENE 241 236536 - 236952 317 138 aa, chain + ## HITS:1 COG:RSc2500 KEGG:ns NR:ns ## COG: RSc2500 COG2259 # Protein_GI_number: 17547219 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 6 130 9 133 136 117 54.0 7e-27 MSDGMKDSLILLARILLMLLFIIFGWWKLTHFELAVSAMQGYGAPLPYIAAIVAVVVELF FGFALILGLGTRPIAAIFALYVLGTSIIGHPFWRLSGMDMVLNEINFYKNISIIGGLLLL IVTGAGRYSLDYRLSKKL >gi|316920095|gb|ADCU01000002.1| GENE 242 236985 - 237443 249 152 aa, chain - ## HITS:1 COG:mll0105 KEGG:ns NR:ns ## COG: mll0105 COG1683 # Protein_GI_number: 13470406 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 1 141 11 155 167 141 53.0 4e-34 MGFPVRYNGSAKPFMPPTLLRWQQEDRLILCCPEVSAGFPTPRLSAEIRYSPLGERAVVE SDNTDVTAGYLAGASIALQLALKHQCRFALLTDGSPSCGSSLIYDGSFSGKKISGMGLTA DLLRKNGITVFSEAEFSALEAAVTLSDRQTAC >gi|316920095|gb|ADCU01000002.1| GENE 243 238103 - 238357 214 84 aa, chain + ## HITS:1 COG:no KEGG:YE1904 NR:ns ## KEGG: YE1904 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 84 12 94 94 101 69.0 7e-21 MCICDISVEDTFIRLPLSPTAAWMLDRQATRALGWRRFLKPKRDQKLMSWRLTPLKDRYE VRFSPNRQPELWMFSAENALRKRL >gi|316920095|gb|ADCU01000002.1| GENE 244 238455 - 238631 266 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKQIYGFLNQLTESYQQERQPHKLLGLFYLTPEQRLKILEDIMAPYSEEEAKLSQEKQ >gi|316920095|gb|ADCU01000002.1| GENE 245 238873 - 239952 996 359 aa, chain + ## HITS:1 COG:PM1149 KEGG:ns NR:ns ## COG: PM1149 COG0614 # Protein_GI_number: 15603014 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Pasteurella multocida # 12 350 8 348 350 462 66.0 1e-130 MNLSTSKLSHAVIAGASLLFVSFTSLADRTVIDQLGRQVTIPDRVNRVVVLQHQTLNLLV QLDAADDVVGVLSSWKKQLGPEFERFSPRLATIPMPGDLTQVNLESLLAEHPQVVFVANY APPEMISQIEKAGIPVVAISLCRDAQSEKGKLNPQMNDEEQAYNLGLQEGIRLIAKVVNR ESQGEALIDYAFKQRETVGARLKDIPVDQRMRVYMANPDLTTYGSGKYTGLMMQHAGAIN VAATSIKGYKQVSMEQVLSWNPQVIFVQDRYPDEVTKITRDPAWQGIDAVKHKRVYLMPE YAKAWGYPMPEALAIGELWMAKQLYPQRFQDIDMNKAANDYYQRFYRTAWTPNSHASVQ >gi|316920095|gb|ADCU01000002.1| GENE 246 239888 - 240940 659 350 aa, chain + ## HITS:1 COG:PM1148 KEGG:ns NR:ns ## COG: PM1148 COG0609 # Protein_GI_number: 15603013 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Pasteurella multocida # 34 345 20 336 340 319 61.0 5e-87 MITISVFIAQPGRQIRMPQFSNRYFHLLFPMATLIVAFFSLGVGQFTISPIEVWHALLAP MQTDRLAGQIIWTVRMPRILMACGAGGALALCGACLQGVFHNPLVDPHIIGVSAGAAFGG TLAILLGFSPWLLMSSTFAFGLLALALVYVIASALGKENRLMLILSGIILSGFFSALVSL LQYMADTEEKLPSIVFWLLGSFATANWHKLLMMAIPLAIASFLLFRLRWRINILSLGDAD ARTLGVSVVGLRRLVLLLCALLVAAQVAVSGGIAWIGLVIPHLARLLVGADHRRLLPAAF WLGGGFMVLVDDVARTLSQAEIPLGIITALIGAPLFALLLIRSRRFSHGE >gi|316920095|gb|ADCU01000002.1| GENE 247 240930 - 241694 207 254 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 24 218 298 509 563 84 29 4e-15 MVNNVALSVDGLTFGYRNALYTPLSFDCRRGEVCAILGANGRGKTSLLNTLTGVLPLLSG KISRSAPIGFVAQSFSTAFAYRVVDIVLMGRVNSIGLLQQPTPKDETIAQEALRTLDIEH LAECDFQTLSGGQRQLVMIARALATGCEMLILDEPTSALDLFNQQAVLRLVCQLAQERQI SVLFTTHDPAHAHLVAHKCLMLLDGKRWAYGATQEMLTEANLLMAYGVRVERASVLSDGQ RYEVLTPLFEIAHD >gi|316920095|gb|ADCU01000002.1| GENE 248 241691 - 242428 305 245 aa, chain - ## HITS:1 COG:STM3141 KEGG:ns NR:ns ## COG: STM3141 COG0725 # Protein_GI_number: 16766441 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 9 243 1 226 236 191 46.0 7e-49 MVKPQTQSLNVLAAGSLRKALSPHLTQFSQQFGINIHVQFGPAGLLREQIERGATWDLFA SANLQHPQKLQAQGLAQSIMPFLRNRLCLTVRRTCMNSESDSWLELLTNTQLSIGTSTPG SDPSGDYTWQLFDRVEALRPHAGESLKQRARQLVGGIDSLQVPANEIASGWIIQQGLADV FVGYAHYAQWLRNNQTVAVVNIPDTDNVFATYALALRDESARPLAEYLSSPRLQQQFINA GFSAC >gi|316920095|gb|ADCU01000002.1| GENE 249 242656 - 243417 881 253 aa, chain - ## HITS:1 COG:kduD KEGG:ns NR:ns ## COG: kduD COG1028 # Protein_GI_number: 16130746 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 253 1 253 253 438 86.0 1e-123 MILDAFSLQGKVALVTGCDTGLGQGMAVGLAQAGCDIVGVNIVEPTETIEKITALGRRFL SLTADLRDTSVIPDVVKRASTEFGHIDILVNNAGIIRRQDALEFSEKDWDDVMNLNIKTV FFMSQAVAHQFIAQGKGGKIINIASMLSFQGGIRVPSYTASKSAVMGVTRLLANEWAKHK INVNAIAPGYMATNNTQQLRADEARSEEILGRIPAGRWGLPEDLMGPAVFLASPASDYIN GYTIAVDGGWLAR >gi|316920095|gb|ADCU01000002.1| GENE 250 243483 - 244319 755 278 aa, chain - ## HITS:1 COG:kduI KEGG:ns NR:ns ## COG: kduI COG3717 # Protein_GI_number: 16130747 # Func_class: G Carbohydrate transport and metabolism # Function: 5-keto 4-deoxyuronate isomerase # Organism: Escherichia coli K12 # 1 278 1 278 278 521 85.0 1e-148 MEVRQSIHSDHAKQLDTDGLRREFLVETIFDADQYTMVYSHIDRIIVGGVMPVQKTVTIG AEVGKQLGVSYFLERRELGIINIGGPGTITIDGECFEIGHREALYVGKGARDIVFASVNT NQPAKFYYNCAPAHTTYPTKKITPADASPQTLGDSKTSNRRTINKYMVPDVLQTCQLSMG LTELAEGNLWNTMPCHTHERRMEVYFYFNMDDDSCVFHMMGQPQETRHIVMHNEQAVISP SWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKDIR >gi|316920095|gb|ADCU01000002.1| GENE 251 244913 - 245434 557 173 aa, chain + ## HITS:1 COG:ECs2449 KEGG:ns NR:ns ## COG: ECs2449 COG3678 # Protein_GI_number: 15831703 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Escherichia coli O157:H7 # 1 173 1 161 161 88 42.0 6e-18 MRKLTALMLASSLALGASMANAAETTASAAPAPAPAATQGNATAPMMMHHQMGMKGPHRG GMFEGLKLTDQQREQMQTIAKEFRAEHKKPMMGDHFKEMHKLVASDKFDESAARAQIEAN NKERNDMMLERMKMENKMYNVLTPEQKKEFNQNFEKRIEKMQQRHAAMVAAEQ >gi|316920095|gb|ADCU01000002.1| GENE 252 245732 - 248431 2515 899 aa, chain + ## HITS:1 COG:YPO2221 KEGG:ns NR:ns ## COG: YPO2221 COG1048 # Protein_GI_number: 16122450 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Yersinia pestis # 22 899 13 890 890 1506 82.0 0 MSSDVRNRLNQQHLAQQCEKTLSALNTEYRYYSLPELEKHLGDISRLPKSMKVLLENLLR HLDGDSVAQDDLQAIADWIKTGHADREIAYRPARVLMQDFTGVPAVVDLAAMREAVLRLG GNVEQVNPLSPVDLVIDHSVTVDHFGSEQAFGENVELEMERNHERYIFLRWGQKAFNRFR VVPPGTGICHQVNLEYLGQTVWHEDVDGQRVAYPDTLVGTDSHTTMINGLGVLGWGVGGI EAEAAMLGQPVSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDG LADLPLADRATIGNMSPEFGATCGFFPVDEVTLNYMRLSGRSEEQIALVEAYCKAQGLWR NAGDEPVFTSTLSLDMSAVESSLAGPKRPQDRVPLPKVPQAFQAATELELTSQKNRVEFE AFTLAGKKHQLEQGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVEKGLVRKPWVKTSLAP GSKVVTDYLNAAGLTPYLEQLGFNLVGYGCTTCIGNSGPLPEPIETAIKAGDLTVGAVLS GNRNFEGRIHPLVKTNWLASPPLVVAYALAGNMKVNLSADPLGHDQQGHAVYLKDIWPTG QEIANAVEMVKTDMFRKEYAQVFDGDAVWQGIQVKGSATYDWQEDSTYIRHPPFFSTMQA EPEAVKDIHGARLLAMLGDSVTTDHISPAGNIKAESPAGRYLLGHGVERKDFNSYGSRRG NHEVMMRGTFANIRIRNEMVPGVEGGVTRHIPTQQQMAIYDAAMQYQDEGVPLAVIAGKE YGSGSSRDWAAKGPRLLGVRVVIAESFERIHRSNLIGMGILPLEFPQGVTRKTLNLTGDE TLDISGLQQLTTGQTVNVTITYADGHSEVIPTRCRIDTSNELTYYRNDGILHYVIRKML >gi|316920095|gb|ADCU01000002.1| GENE 253 248723 - 249559 583 278 aa, chain + ## HITS:1 COG:STM1741 KEGG:ns NR:ns ## COG: STM1741 COG1226 # Protein_GI_number: 16765085 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Salmonella typhimurium LT2 # 1 272 5 276 278 268 47.0 7e-72 MGTWRQKIYGHLFDIRTRVGRKMEYFWIAMAVASVFLVFIESGDPQPLRVLVAREDLYLK LEILFTAVFTVEYFLRLLTTPKEKNYAFTFLGVIDLLTILPLYILLIYPEMAGQYVTVLR LLRVLRVLRIFKLLRYMGAASLLWDSIIGVRKKLLVFFTFVMILLCLFGGVMYVIEGPEH GFTSLPISVYWAVVTMTTVGYGDITPHTPAGRILASMLILIGYSIIAIPTGVLTAHMTEV LQRRRHLRRCEHCHKSGHDDEARFCKFCGQQLSHYSDE >gi|316920095|gb|ADCU01000002.1| GENE 254 249629 - 249955 542 108 aa, chain - ## HITS:1 COG:ECs1748 KEGG:ns NR:ns ## COG: ECs1748 COG3099 # Protein_GI_number: 15831002 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 2 108 29 135 135 170 82.0 7e-43 MMDLDNRLTEDEALDQAYDIFLELAVDNLDPADVILFNLQFEERGAAELFDPAEDWKDHV DFDLNPDFFVEVVIGLTDGESEDITDVFARVLICREKDHKLCHILWKE >gi|316920095|gb|ADCU01000002.1| GENE 255 249998 - 251458 1296 486 aa, chain - ## HITS:1 COG:YPO2188 KEGG:ns NR:ns ## COG: YPO2188 COG1502 # Protein_GI_number: 16122418 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Yersinia pestis # 1 486 1 486 486 899 88.0 0 MTTFYTVISWLAIFGYWLLIASVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLSFGE LHLGKRRAERAKAMWPSTAHWLADLKNCKSIFATGNSEVATPLFQLCERRQGIAGVKGNQ LQLLTTSDDTLKALIRDIELARSNIEMVFYIWQPGGLADQVAESLMAAARRGVHCRLLLD SAGSVTFFRSPYPAMMRNAGVEVVEALKVNLMRVFLRRMDLRQHRKVVLIDNFIAYTGSM NLVDPRFFKQDAGVGQWIDVMARMEGPVATTMGIIFSCDWEIETGKRILPPEPEYHSLPF EEESGHTIQVIASGPGFPDELIHQALLTSVYSAREQLIMTTPYFVPSDDLLHAICTAAQR GVDVSIIVPKKNDSMMVGWASRSFFAELLEAGVKIYQFEGGLLHTKSVLVDGQLSLVGTV NLDMRSLWLNFEITLVIDDDGFGADLACVQDDYIARSTLLDEAEWLKRPLWQRVVERLFY FFSPLL >gi|316920095|gb|ADCU01000002.1| GENE 256 251933 - 252424 620 163 aa, chain - ## HITS:1 COG:PM0817 KEGG:ns NR:ns ## COG: PM0817 COG0783 # Protein_GI_number: 15602682 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Pasteurella multocida # 12 159 5 152 159 189 64.0 1e-48 MATTKKATKSHIGLDTKQSAKLAESLNSLLGNYQVLYMNVRGYHWNITGPQFFELHVKFE ETYNDLLLKVDELAERILTLGYQPRHAFSEYLKTADIKEDTNVTDDKGTLKGLLSGYSIL LTQQREILELASEAGDEGTSSLMSDYIKEQEKQVWMLNAYLGK >gi|316920095|gb|ADCU01000002.1| GENE 257 253215 - 253511 366 98 aa, chain - ## HITS:1 COG:ECs1751 KEGG:ns NR:ns ## COG: ECs1751 COG2350 # Protein_GI_number: 15831005 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 98 33 130 130 149 73.0 1e-36 MLYLIFSQDVPDALDKRMTARPDHLARLQVLRDEGRLLTAGPLPAIDSNDPGAAGFLGSA IIAEFESLEQAKAWADADPYVAAGVYQAVTVVPYKKVF >gi|316920095|gb|ADCU01000002.1| GENE 258 253910 - 254581 440 223 aa, chain + ## HITS:1 COG:STM1737 KEGG:ns NR:ns ## COG: STM1737 COG0810 # Protein_GI_number: 16765081 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Salmonella typhimurium LT2 # 92 222 111 241 242 84 45.0 2e-16 MPAEEPEPINVVMINPAMFAAPAPVATPQPDAKPEAAPPPPPKEESKPEPKPEPKPEPKP EPKPVPKPKPKPVKKEVVKPQPKKVVEEKPREEIPRSTVTSPETSSSSTSTHASTSTTKS SNNTTNAPAVAAAPTGPQALSIVKPGYPARAFALKQEGKVVVRYDVDSDGRVTNIEILSA EPRSLFERDVKLAMKKWRFVPGREGKGLTKTIIFRLSGDTEIR >gi|316920095|gb|ADCU01000002.1| GENE 259 254662 - 255090 388 142 aa, chain - ## HITS:1 COG:YPO2195 KEGG:ns NR:ns ## COG: YPO2195 COG1607 # Protein_GI_number: 16122425 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Yersinia pestis # 7 139 14 146 149 229 83.0 1e-60 MSEKHRFPEGELVLRTLAMPADTNANGDIFGGWIMSQMDIGGAILAKEVAEGRVVTVAVN GITFLKPVAVGDVVCCYARCIRTGRSSITVNIEVWVKKVSSDPIGQRYCVTEAVFTYVAV DDDNKSRTLPAGKENFRVGFED >gi|316920095|gb|ADCU01000002.1| GENE 260 255209 - 255754 526 181 aa, chain - ## HITS:1 COG:STM1735 KEGG:ns NR:ns ## COG: STM1735 COG2917 # Protein_GI_number: 16765079 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Intracellular septation protein A # Organism: Salmonella typhimurium LT2 # 1 179 1 179 179 238 75.0 6e-63 MKQLLDFLPLVVFFVCYKLYDIYVASGALIAATAVALIVTWLKYRKVEKMTLITFVMVAI FGTLTLVFHNDLFIKWKVTVIYALFSIALLVSQIVLKKPLIQRMLGKEISLPDVVWSRLN TAWALFFMACGLANIYVAFWMPQSVWVDFKVFGLTALTLVFTLLSGVYIYRHMAEEQKTS K >gi|316920095|gb|ADCU01000002.1| GENE 261 255983 - 257755 1421 590 aa, chain + ## HITS:1 COG:VCA0103 KEGG:ns NR:ns ## COG: VCA0103 COG0659 # Protein_GI_number: 15600874 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Vibrio cholerae # 1 555 4 558 592 589 56.0 1e-168 MKWKFINGWMPGLALLMGYQREWLTSDIRAGLSVAAVALPVAIAYADLAGVGAIVGLYSC VFPMIAYALFGSSRQVIVGPDTATCAVIAAVVTPLAAGNAELQWQLCIMMTLMTGGWCLI ASRFRLGALADLLSRPILTGLLNGLTITIIVDQLGKIFGFQTKARELIERLISLPHDLLS SHWPTMLLSLLTLLVLIGVKRLRPKWPAPLIAMCLAMLLVWLFDLPLYGIRTIGGFSDGL PIVQWPSFQPGLLRDLVIPALNLALISFVSLMLTARSFAAKNGYEVNADAEFRALGIANI VSGLSQGFAISGTSSRTAVNDANGGKSQLVSIVAAVVIGVVVLFFTSPLKYIPVSALGVV LVYASWSLLDFRTIVQLRRRNPAAFRLALFTFASVMLVGVMPGIGLAVLLGLLQFLRTVF RPTEQLLGVNEEGMIHSLGNGAQVKAVDGVLMYRFNSPLTYFNVSYFKRRVLNLVDGMPF QPRWVVIDAVASFTYPDISVISTVDELKRDLKQRNVKLVLAGRRTDLKRWFSANRAKGEE KGLLFVSDLYLALKLIQSSECVNCEPSPAGEKRILALEDKTAMGQMSEKQ >gi|316920095|gb|ADCU01000002.1| GENE 262 257869 - 259260 1481 463 aa, chain - ## HITS:1 COG:YPO1716 KEGG:ns NR:ns ## COG: YPO1716 COG1823 # Protein_GI_number: 16121976 # Func_class: R General function prediction only # Function: Predicted Na+/dicarboxylate symporter # Organism: Yersinia pestis # 1 463 3 465 465 661 86.0 0 MNLPLVINVLVFVALLLLLAQTRRTKWSLAKKVLVGLVMGVLFGLGLQLVYGSDNPLLKD SISWFNIVGNGYVQLLQMIVMPLVFVSILSAVAKLHNASSLGKISFLSIGTLLFTTMIAA LVGVLVTNLFGLTAEGLVQGTQETARLAAINTNYASKVSDLSVPQLVLSFIPKNPFADLT GASPTSIISVVIFAAILGTAALQLLKDDEVKGKRVLTAIDTLQSLVMKLVRQIMKLTPYG VLALMTKVVAGSNMHDIIKLGSFVVASYLGLAIMFVVHGLLLSFTGINPLKFFRKVWPVL TFAFTSRSSAASIPLNVEAQTRRIGVPESIASFSASFGATIGQNGCAGLYPAMLAVMVAP TVGINPLDPLWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISVEPL IDMGRTALNVNGSMTAGTITSQILRQTDKNVFDSEEEAELAHQ >gi|316920095|gb|ADCU01000002.1| GENE 263 259504 - 260046 379 180 aa, chain - ## HITS:1 COG:YPO1717 KEGG:ns NR:ns ## COG: YPO1717 COG1988 # Protein_GI_number: 16121977 # Func_class: R General function prediction only # Function: Predicted membrane-bound metal-dependent hydrolases # Organism: Yersinia pestis # 1 178 1 176 182 244 70.0 8e-65 MTAEGHLIFSVACAIFAKKAELTPALAHGDWWHIIPGALLTCLWPDIDHPKSVLGQRLKW LSSPIARMFGHRGFTHSLLAVIGGIFLLHCEMPSYMGIPVDAMHAMVIGYLSHLLADMLT PAGVPLLWPIRWRFRLPILNSQKGNQLERILCMSLVGYAVYWGGDLVPFYDLLRYVSQKL >gi|316920095|gb|ADCU01000002.1| GENE 264 260196 - 260906 621 236 aa, chain - ## HITS:1 COG:YPO2446 KEGG:ns NR:ns ## COG: YPO2446 COG0637 # Protein_GI_number: 16122667 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Yersinia pestis # 22 234 7 220 221 298 70.0 4e-81 MPASVSLGPLISIDEEMPVSRIEAVIFDMDGLLIDSEPLWTQGEHDVFSSLGIDVNAADI PETLGLRIDLVVKLWYQRTPWQGASQEEVTERIIRRVIELVRDTKPLLPGVEHALKLCRQ QGMKIGLASASPLYMLNDVLEMFNISQYFDAVVSAEALPYSKPHPEVYLNAAHALGVDPL NCVTLEDSFNGMIATKAARMRSIVVPAPENINDPRWALADVKLNNLNELSASDIQP >gi|316920095|gb|ADCU01000002.1| GENE 265 261085 - 261630 438 181 aa, chain + ## HITS:1 COG:no KEGG:YE1891 NR:ns ## KEGG: YE1891 # Name: yfeE # Def: putative yfeABCD locus regulator # Organism: Y.enterocolitica # Pathway: not_defined # 1 181 1 181 184 262 71.0 5e-69 MTYQQAGWVAVIKRILGWVVFIPALLSTIVSVLNFLYQHSQKQEGLNAVMLDFVHVMIDM VKFNTHFLDVFWFNSPEPALGQGFTGANIMFWVIYWLIFVGVALQASGARMSRQVRHIRE GIEDQLILEQMKGAEGHSREALEKRIVLPRHTIFLQFFPLYILPIIVAVIGYFILKLLGM L >gi|316920095|gb|ADCU01000002.1| GENE 266 261982 - 262854 711 290 aa, chain - ## HITS:1 COG:YPO2444 KEGG:ns NR:ns ## COG: YPO2444 COG3001 # Protein_GI_number: 16122665 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Yersinia pestis # 1 288 1 287 291 419 70.0 1e-117 MWQAVSRLLSGHFDQTFTIREKQELAGGEVHQAWCVSDGDRKVFIKCDTPDFLQDFKAEA DQLECLARSHTVRTPQVYGVGSTREASFLLLEYLPVRPLDAHNAYLLGQQLARLHQWSEQ PQFGLDFDNHLSTSPQPNMWQRRWAQFFAEQRIGWQLQLAAEKGIHFGDIDSIVSTVEQR LQGHQPQPSLLHGDLWPANMGLSAQGPVIFDPACYWGDRECDLAMLPLYPLLPAQIYDGY QSVWPLPTSFIDRQPIYQLYHQLNMCNLFAGPHLETAIQAVDKLMEKDVA >gi|316920095|gb|ADCU01000002.1| GENE 267 263138 - 263458 345 106 aa, chain - ## HITS:1 COG:no KEGG:NT01EI_1737 NR:ns ## KEGG: NT01EI_1737 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 104 1 104 107 115 59.0 6e-25 MSQSAIACYVVTFSYPQADLAENAKLNNQLMLEGFATTVADSDGIPHELGPNSYAITSLQ DKSDVERLAQALGKVALGQEPEVEAVLRDEYFTQLWAARNPSKGRN >gi|316920095|gb|ADCU01000002.1| GENE 268 263649 - 264278 282 209 aa, chain + ## HITS:1 COG:YPO2438 KEGG:ns NR:ns ## COG: YPO2438 COG0741 # Protein_GI_number: 16122659 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Yersinia pestis # 1 209 8 220 220 264 63.0 1e-70 MLAVLLLAGCAKEQTPPQTVKLNVNNNARGSFLDARTPPEGEFGTYIRTASNSYGIDETL IKAIIQVESGGNPHAVSTSNAIGLMQLKASTAGKDAYRKKGRGGQPTSRELKDPAVNIDL GTAYLNILQNQQLAGITNPKTMRYAMIVSYANGAGAMLRTFSPNRKVAIDKINSMTPEQF YQHIQKRHPAAQAPRYLWKVNTAYLAMVQ Prediction of potential genes in microbial genomes Time: Wed May 18 14:51:45 2011 Seq name: gi|316920036|gb|ADCU01000003.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.3, whole genome shotgun sequence Length of sequence - 65093 bp Number of predicted genes - 58, with homology - 57 Number of transcription units - 31, operones - 11 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 513 - 1796 1008 ## COG0814 Amino acid permeases + Term 1816 - 1858 6.0 + Prom 1864 - 1923 5.4 2 2 Tu 1 . + CDS 1979 - 3115 979 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 3 3 Op 1 2/0.125 - CDS 3274 - 3867 176 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 4 3 Op 2 13/0.000 - CDS 3867 - 4673 233 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 5 3 Op 3 49/0.000 - CDS 4667 - 5479 485 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 6 3 Op 4 38/0.000 - CDS 5479 - 6198 423 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Term 6421 - 6469 -0.8 7 3 Op 5 . - CDS 6489 - 8078 1516 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 8288 - 8347 4.1 + Prom 8180 - 8239 6.6 8 4 Tu 1 . + CDS 8373 - 8762 382 ## COG3152 Predicted membrane protein + Term 8776 - 8805 2.1 + Prom 8780 - 8839 5.2 9 5 Tu 1 . + CDS 8997 - 10910 1675 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 10 6 Tu 1 . - CDS 11054 - 11302 253 ## Spro_2106 hypothetical protein - Prom 11354 - 11413 4.4 11 7 Tu 1 . + CDS 11833 - 12675 567 ## COG0840 Methyl-accepting chemotaxis protein 12 8 Tu 1 . - CDS 12672 - 12875 120 ## SDY_1988 hypothetical protein - Prom 12971 - 13030 7.9 13 9 Tu 1 . - CDS 13066 - 13251 161 ## NT01EI_1749 hypothetical protein - Prom 13315 - 13374 3.0 - Term 13606 - 13633 -0.1 14 10 Tu 1 . - CDS 13687 - 14835 1085 ## COG3203 Outer membrane protein (porin) - Prom 14896 - 14955 1.8 + Prom 15520 - 15579 3.5 15 11 Op 1 16/0.000 + CDS 15743 - 17680 1719 ## COG0441 Threonyl-tRNA synthetase 16 11 Op 2 36/0.000 + CDS 17739 - 18218 666 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 + Term 18235 - 18279 10.1 17 12 Op 1 46/0.000 + CDS 18317 - 18514 331 ## PROTEIN SUPPORTED gi|238919784|ref|YP_002933299.1| ribosomal protein L35, putative 18 12 Op 2 13/0.000 + CDS 18557 - 18913 567 ## PROTEIN SUPPORTED gi|170768779|ref|ZP_02903232.1| ribosomal protein L20 + Term 18931 - 18973 6.8 19 12 Op 3 40/0.000 + CDS 19546 - 20529 1181 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 20 12 Op 4 13/0.000 + CDS 20544 - 22931 2389 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 21 12 Op 5 . + CDS 22936 - 23232 309 ## PROTEIN SUPPORTED gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 + Term 23240 - 23283 7.4 22 13 Op 1 . + CDS 23315 - 23512 320 ## YE2589 hypothetical protein 23 13 Op 2 1/0.375 + CDS 23548 - 24573 655 ## COG4139 ABC-type cobalamin transport system, permease component 24 13 Op 3 1/0.375 + CDS 24583 - 25353 452 ## COG4138 ABC-type cobalamin transport system, ATPase component + Prom 25480 - 25539 5.1 25 14 Op 1 5/0.125 + CDS 25636 - 26784 1057 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 26 14 Op 2 12/0.000 + CDS 26777 - 27793 843 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 27 14 Op 3 8/0.000 + CDS 27793 - 29775 1896 ## COG0451 Nucleoside-diphosphate-sugar epimerases 28 14 Op 4 6/0.000 + CDS 29772 - 30692 564 ## COG0726 Predicted xylanase/chitin deacetylase 29 14 Op 5 5/0.125 + CDS 30806 - 32338 1256 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 30 14 Op 6 9/0.000 + CDS 32335 - 32679 263 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 31 14 Op 7 . + CDS 32679 - 33074 280 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 33051 - 33102 9.2 32 15 Tu 1 . - CDS 33121 - 33384 308 ## PMI1270 hypothetical protein - Prom 33455 - 33514 7.2 + Prom 33419 - 33478 5.5 33 16 Tu 1 . + CDS 33611 - 34075 263 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 + Prom 34134 - 34193 7.5 34 17 Op 1 . + CDS 34301 - 35317 899 ## COG0095 Lipoate-protein ligase A + Prom 35328 - 35387 4.6 35 17 Op 2 . + CDS 35407 - 36849 1083 ## COG0397 Uncharacterized conserved protein + Term 36944 - 36995 2.1 36 18 Op 1 10/0.000 - CDS 37959 - 38780 239 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 37 18 Op 2 8/0.000 - CDS 38773 - 39774 905 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 38 18 Op 3 4/0.125 - CDS 39771 - 40610 826 ## COG4558 ABC-type hemin transport system, periplasmic component 39 18 Op 4 4/0.125 - CDS 40607 - 41644 852 ## COG3720 Putative heme degradation protein - Term 41712 - 41745 4.5 40 19 Op 1 . - CDS 41769 - 43889 1942 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 43938 - 43997 1.9 41 19 Op 2 . - CDS 44006 - 44209 208 ## - Prom 44232 - 44291 6.4 42 20 Op 1 3/0.125 - CDS 44323 - 44940 560 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 43 20 Op 2 4/0.125 - CDS 44937 - 45461 463 ## COG3721 Putative heme iron utilization protein 44 20 Op 3 . - CDS 45458 - 46786 1083 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 46894 - 46953 4.9 - Term 46927 - 46960 2.1 45 21 Tu 1 . - CDS 46981 - 48042 764 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 48190 - 48249 3.6 - Term 48231 - 48276 4.4 46 22 Tu 1 . - CDS 48294 - 49115 575 ## COG1806 Uncharacterized protein conserved in bacteria - Prom 49174 - 49233 6.5 47 23 Tu 1 . - CDS 49236 - 49583 301 ## Hneap_0285 hypothetical protein - Prom 49821 - 49880 6.1 - Term 49827 - 49891 7.2 48 24 Tu 1 . - CDS 49962 - 50828 451 ## CCNA_02953 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase (EC:2.4.1.150) - Prom 50911 - 50970 5.6 + Prom 51316 - 51375 3.1 49 25 Tu 1 . + CDS 51411 - 53786 2477 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase + Term 53820 - 53854 3.2 - Term 54275 - 54305 4.1 50 26 Tu 1 . - CDS 54330 - 55430 839 ## COG0628 Predicted permease - Prom 55512 - 55571 5.4 + Prom 55915 - 55974 3.4 51 27 Op 1 6/0.000 + CDS 56114 - 59170 2708 ## COG0277 FAD/FMN-containing dehydrogenases 52 27 Op 2 . + CDS 59167 - 59586 289 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism + Term 59602 - 59651 10.0 + Prom 59631 - 59690 3.9 53 28 Tu 1 . + CDS 59713 - 60732 685 ## COG0598 Mg2+ and Co2+ transporters + Term 60857 - 60901 3.8 + Prom 60894 - 60953 5.2 54 29 Op 1 . + CDS 61128 - 61442 147 ## COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 55 29 Op 2 . + CDS 61445 - 61834 402 ## Pecwa_1570 ACT domain protein 56 29 Op 3 . + CDS 61840 - 62547 282 ## COG0640 Predicted transcriptional regulators + Term 62565 - 62593 1.3 - Term 62553 - 62581 1.3 57 30 Tu 1 . - CDS 62603 - 63541 1051 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Prom 63620 - 63679 2.0 + Prom 63915 - 63974 4.0 58 31 Tu 1 . + CDS 64019 - 64756 548 ## COG2964 Uncharacterized protein conserved in bacteria + Term 64989 - 65030 1.3 Predicted protein(s) >gi|316920036|gb|ADCU01000003.1| GENE 1 513 - 1796 1008 427 aa, chain + ## HITS:1 COG:STM2970 KEGG:ns NR:ns ## COG: STM2970 COG0814 # Protein_GI_number: 16766275 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 17 427 16 428 429 401 52.0 1e-111 MSIISPDTGRVATERPTKWNKTDTVWMFGLYATAVGAGTLFLPINAGLNGPLVLILMAIL AYPLTYLPHRALSRFVLSGSSRDGDITDVVEEHFGILAGKAIMVLYLLAFFPIVLVYSIS ITNALESFLINQFHVTPPPRVWLSLAVVAALSLILRTGKETIVAAMGILVFPLIVFLLGI SLYLIPYWNVHAFFSGLSQTSVSDPQLWRSLWLAVPVMVFSFSHAPIISSFSSTQKGLYG EGAERRCARIMRYSYMMICISILFFVFSCVMSLSHAEMLAARDENITVLSSLANKFSNPL IAYLGPVMAILAMSKSYLGTSLGVTEGATSLIDGAFRTVGKKVSSGATHKISAILLFAIT WLVTFLNPSALHIIETISGPLIAVILFILPIYAIHKVPAMKKYRSITNPFVLIMGLIALS ALVYSLF >gi|316920036|gb|ADCU01000003.1| GENE 2 1979 - 3115 979 378 aa, chain + ## HITS:1 COG:YPO1310 KEGG:ns NR:ns ## COG: YPO1310 COG0614 # Protein_GI_number: 16121592 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Yersinia pestis # 8 366 12 369 381 241 35.0 1e-63 MARNFNRLALVCMLALSVPAIATTYPLTVTDTSGQTLTLKHEPKRIVVQDGRDIMTLALL DRADPFSRIVAWNNLLKKSDPETLAVLNQKWPGEADKIPDMGFSDKGEVNLESVIARKPD LMIAQLRAKPALADTGVLKQLAALNVPVLFVDTYLQPIANTQKSVQLLGEVLNREHEAKE YTDFYQKHLQEITSITAKVTPKPRVFMEAKAGVGGADACCFTHGHVGFGGMIEAIGAENL GSALLPGANGDIAIEKVISLKPDVYIISGARWKNKNSIAVPFGYGVTQKQVDDGFKKLEA RNGFNQIKAVKENRLYGMYHNFYNHPYNIVGLDYLAKFIYPQQFEALDPAQTYRTIISTF TQIPPADAIFGAQAPVNK >gi|316920036|gb|ADCU01000003.1| GENE 3 3274 - 3867 176 197 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 18 192 39 232 329 72 25 6e-12 MFCVSQLTIEQDNRTLWDNFSLSVTPGERIGISAPSGYGKTTLGRVLANWQSCSSGQIML DGMPLPTKGYCPVQLVPQHPELTFNPYRTTGQALRDAWQPDDMQLTRFHVKREWLARKPN QLSGGELARIALLRALDPRTRLLIADEVTAQLDPHIQRDIWQQLIIESQQRPLSMIIFSH QTALLEQICSRIVAVKA >gi|316920036|gb|ADCU01000003.1| GENE 4 3867 - 4673 233 268 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 7 222 9 235 563 94 29 1e-18 MLSFKHLTIENARYSWFGRKRWSPILSDINLTLHRGEIVALVGGSGEGKSLLLQSALALL PQNLRMRGEIQLEGKTLDEQQCQQLRGNTLCYVPQGVSSLNPLLKVGTQLSRSLQLSGSH TCALALDQQIKHYQLQADVLFKYPRQLSGGMAKRILACNAALSGAQYILADEMTAWLDEP LACQLLQQLRELSAQGAGVLWVTHDLSLASRFADRIVALNDGRISDDISIDDLKNGNGSP TLRRHWQAQPEYHPLFANNDASFPMRSV >gi|316920036|gb|ADCU01000003.1| GENE 5 4667 - 5479 485 270 aa, chain - ## HITS:1 COG:STM1257 KEGG:ns NR:ns ## COG: STM1257 COG1173 # Protein_GI_number: 16764609 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 270 1 270 270 343 68.0 2e-94 MLNNPAPALLRFVLSALLLALLTVYGVSLLSADIPLDLLARYQAPSAAHWFGTDNLGRDL WLRCFQGALTSLQIGIGAALCSGIIAMLVASLTLIHPTIDHLLRLIIDTLLSLPHLLLLI LICFTVGGGKQGVILAVALTHWPKLALILRAEAQRIRTSDYMTLSQRLGNSRWHCWRAHY LPALAPQWFVGTLLMFPHAVLHSAALSFLGFGLAPHEPSLGILLADALRFLSNGCWWLAV FPGLILLLIVLLFDQCARAIQQLWLRNQSC >gi|316920036|gb|ADCU01000003.1| GENE 6 5479 - 6198 423 239 aa, chain - ## HITS:1 COG:STM1256 KEGG:ns NR:ns ## COG: STM1256 COG0601 # Protein_GI_number: 16764608 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 237 83 319 324 346 75.0 2e-95 MLYNAPVAQVISERFATSFALLAGAWLLSGGLGLLMGFAAGRYLHRWPDRFICRLSYLLS SLPTFWVGLLLLVVFAVHWQWFPVCCAWEPGSNAQAASIGERIHHLVLPMIALSLMGLGQ IALHTREKIAEVMSSDFVRYAQAQGDCGWSLLRVQVLRHALTPALCLQFASVGELLGGSL LAEKIFAYPGLGQATIDAGLRGDIPLLMGIVLFSTLLVFCGNSLSAMLLARMNRILEHK >gi|316920036|gb|ADCU01000003.1| GENE 7 6489 - 8078 1516 529 aa, chain - ## HITS:1 COG:STM1255 KEGG:ns NR:ns ## COG: STM1255 COG0747 # Protein_GI_number: 16764607 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 12 529 29 544 544 833 78.0 0 MPLNLKALPYTLALIFSTLPLYTQADTTPAPQHQLKLAIGEEPTEGFDPLLGWSHGSYLL LHSPLLKQKADLSWDNLLTEKVTNSEDGKIWTLSLKPELKFSDGSPLTAKDVAFTYNQAA RGGGKIDMGNFASAKALDEHRVEIVLSAPQSTFVNVLGSLGIVSAEKYDAKTYAQKPIGA GPYRLVSFQPGQQLIVEANPYYAGHKNDFNKLVFVFLDEDSAYAAAQSGQLGLVRIPPSL SVTPQSSLKLWVRPSVENRGIVFPMTPAGKKDANGYPIGNDVTADVAIRRAINYAINRQL LADQLMEGHAIPAYSAVQSLPWDSKDAAFKDGDLAKAKQILDEAGWKVGSDGVRVKDGLE ARLTLWYTSGDSTRRDLAQAIRAMLEPLGIKMDLQSGSWETVERNMHSNPTLFGWGSLDP MELYHHYSSKAAGVEYYNPGYYSNKAVDEHLQQALDAPTWQKAVPFWQQVEWDGKTGVGV KGDAAWAWLLNVQHTYLANPCIDLGKPAPEIHGSWSVLNNLQDWKWTCK >gi|316920036|gb|ADCU01000003.1| GENE 8 8373 - 8762 382 129 aa, chain + ## HITS:1 COG:ECs3985 KEGG:ns NR:ns ## COG: ECs3985 COG3152 # Protein_GI_number: 15833239 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 118 1 118 121 143 61.0 7e-35 MDWYLKVLKNYFNFRDRARRREYWWFVLVNAIITILLGFVQDALGWSNAEGEGALTIIYG LLLLIPSIAVMVRRLHDTDRSGWWVLIGLIPIVGWFVLIIFAVFDSQPGTNRFGPNPKDI QAPTSSIIS >gi|316920036|gb|ADCU01000003.1| GENE 9 8997 - 10910 1675 637 aa, chain + ## HITS:1 COG:STM1910 KEGG:ns NR:ns ## COG: STM1910 COG0768 # Protein_GI_number: 16765252 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Salmonella typhimurium LT2 # 8 623 3 623 623 875 69.0 0 MSRLPEPLRDHSAEATLFVRRSIIAAVVVVLLFGVLAFNLYHLQVEEHEQYQTRSNANDI KTLPIAPVRGLIYDRNGIPLVQNQTLYQIELIPGKIADLDATLKALTPIVDLTQDDIDNF HQAMKSSRRFAEVPLKEALTDVEVARFSVNEFEFPGVSISRYQQRYYPYGAELAHVVGYV SKINDRDAKRLDDAGESENYAADHDIGKQGIERFYESELHGKTGSQEVEVDSHGRIVREL AEIPPQAGKNIYLTIDLHLQQYIEKLLKGQRAAVVVMDPRDGGILAMVSSPSYDPNPFVN GISYKSYQALLDNPDLPLINRVTQGVYPPASTVKPFMATSALLAGVITPQTTFFGQPTWV LPGTNRHYRDWLKTGHGMLNVTKAIEESADTFFYQVAYEMGIDRIHFWLSKFGYGQYSGI DLMEQAKGVLPDREWKLKVHKKAWYQGDTISVGIGQGYWTATPIQMVKALSTLINNGNTK TPHLMYSMKQGNHVERYQQQEHVQVADPKSPVWDIVKKGMFGMANYPNGTGYKYFHTAPY EIAAKSGTSQVFGLKQDQVYNAKMIPVKLRDHIFYTAFAPYSNPKVAVAVILENGGGDGV SAAPTTRAILDYIFAQTKPEEPPTLPSPDAEQIRDAH >gi|316920036|gb|ADCU01000003.1| GENE 10 11054 - 11302 253 82 aa, chain - ## HITS:1 COG:no KEGG:Spro_2106 NR:ns ## KEGG: Spro_2106 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 81 1 78 79 118 66.0 8e-26 MRKSLVRIGIFEVEDAELSNVPDTQLNSHTLSIPCKSNTDLCMQLDGWDEHTTVPAVLDG KNALLYRNHYDRQSDAWVMRFA >gi|316920036|gb|ADCU01000003.1| GENE 11 11833 - 12675 567 280 aa, chain + ## HITS:1 COG:STM3138 KEGG:ns NR:ns ## COG: STM3138 COG0840 # Protein_GI_number: 16766438 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Salmonella typhimurium LT2 # 7 273 76 342 352 190 39.0 2e-48 MQELVTVDELNQKNELASQGMGTLSELVGLIEHHSAEGIGYIDELIAVLKGINDNIDGIN KLSKQTNLLAINSAIEAAHVGGSGAGFSVIAKEIKQLSSEIQSQAANITDLTLDINQHAK NVSASVGENSQSTHAIRIATEKASQMLQQVIELSAHMQKIIRFIATQQFLNTVKLDHVIW KAKVYEMILHCDMTSGVNSHTECRLGKWYYGDAGSSFSHFNGFIQLEAPHAEVHRSGREA LEAFRAGNNDALKKSLAIMEQASTQVIKRIDELLTQIGDD >gi|316920036|gb|ADCU01000003.1| GENE 12 12672 - 12875 120 67 aa, chain - ## HITS:1 COG:no KEGG:SDY_1988 NR:ns ## KEGG: SDY_1988 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 63 29 91 91 79 49.0 4e-14 MYALVMMVCYLNGSCENLYLGGFDTEEQCVRELKVQRIQRGGCLPLENVLDDFWQPATRA ADFHRVF >gi|316920036|gb|ADCU01000003.1| GENE 13 13066 - 13251 161 61 aa, chain - ## HITS:1 COG:no KEGG:NT01EI_1749 NR:ns ## KEGG: NT01EI_1749 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 61 1 61 61 62 60.0 4e-09 MYPAAWAFVKTVYLIGSVISALLTFKACADPSIKIRIFTAILIGLTWPMSFPIVLLFWAF M >gi|316920036|gb|ADCU01000003.1| GENE 14 13687 - 14835 1085 382 aa, chain - ## HITS:1 COG:YPO1222 KEGG:ns NR:ns ## COG: YPO1222 COG3203 # Protein_GI_number: 16121511 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Yersinia pestis # 1 382 4 374 374 373 59.0 1e-103 MKHRVLAVVIPALMALANSSQAAEIYNQDGNKLDLHFKIDGLHYLSDNDNSDGDHSYVRG GFSGETQITDMLTGYGMWEYQANLNHTEGEDNKNFSRFGFAGLKFGDYGSLDYGRNSGII YDIMSWTDLQPEFDGSTVGADNFMFQRAGGVLTYHNRDFFGLVDGLNFGLQYQGKNDDQT EDQSGRDVLGQNGDGYGMSLSYELGYGFSLGGAYFQSDRTNDQNSGGKGGRYNNIMGNGD KAEAYTFGLKYENSGYYAAANYTQSYNAIRFGNSNDHNEAYGYANKAIGVEMYTGYTFDF GLQPFVGWNYVEGKDLGTGGASRDYGDQKLVNFIDLGTTYYFNKNMSAYVDYKINMLDDN DFTKSAGIDTDDTVALGIVYQF >gi|316920036|gb|ADCU01000003.1| GENE 15 15743 - 17680 1719 645 aa, chain + ## HITS:1 COG:YPO2433 KEGG:ns NR:ns ## COG: YPO2433 COG0441 # Protein_GI_number: 16122654 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Yersinia pestis # 1 642 1 642 642 1230 88.0 0 MPVITLPDGSQRQFDKPVSVMDIAMDIGPGLAKACIAGRVNGELVDACDPITVDANVSII TAKDQEGLEIIRHSCAHLLGHAIKQLWPNTKMAIGPVIDNGFYYDVDLDHTLTQEDLELL DKRMHELADKDYDVIKKKVSWQEARDTFEARQEPYKVAILDENISHDDQPGLYHHEEYVD MCRGPHVPNMRFCHHFKLQKSSGAYWRGDSNNTVLQRIYGTAWADKKQLNAYLQRLEEAA KRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEAFVRVKLKEYDYQEVKGPFMMD RVLWEKTGHWENYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMGEFGS CHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNSCIKMVYDMYSIFGFEKIAVKL STRPEKRIGSDEIWDRAEEDLAEALKENGIPFEYQPGEGAFYGPKIEFTLHDCLDRAWQC GTVQLDFSLPGRLNASYVGENNERLVPVMIHRAILGSMERFIGILTEEYAGFYPTWLAPV QVQVMNITDAQADYVDELTKKLQAAGIRAKSDLRNEKIGFKIREHTLRRVPYMLVCGDKE VESGKVAVRTRRGKDLGTMDVNEVIEKLQKEIRSRSLHQLEESSY >gi|316920036|gb|ADCU01000003.1| GENE 16 17739 - 18218 666 159 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 1 158 2 159 159 261 80 9e-69 QEVRLTGVDGEQIGIVSLNEALEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKAT KEQKKKQKIVQVKEIKFRPGTDDGDYQVKLRSLVRFLEDGDKAKITLRFRGREMAHQQIG MEVLNRVKEDLSELAVVESFPTKIEGRQMIMVLAPKKKQ >gi|316920036|gb|ADCU01000003.1| GENE 17 18317 - 18514 331 65 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238919784|ref|YP_002933299.1| ribosomal protein L35, putative [Edwardsiella ictaluri 93-146] # 1 65 1 65 65 132 98 6e-30 MPKIKTVRGAAKRFKKTAGGGFKRKHANLRHILTKKSTKRKRHLRPKGQVSKGDLGLVVA CLPYA >gi|316920036|gb|ADCU01000003.1| GENE 18 18557 - 18913 567 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|170768779|ref|ZP_02903232.1| ribosomal protein L20 [Escherichia albertii TW07627] # 1 118 1 118 118 223 96 3e-57 MARVKRGVIARARHKKVMKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQL WIARINAAARQNGISYSRFINGLKKASVEIDRKILADIAVFDKVAFAALVEKAKSALA >gi|316920036|gb|ADCU01000003.1| GENE 19 19546 - 20529 1181 327 aa, chain + ## HITS:1 COG:YPO2429 KEGG:ns NR:ns ## COG: YPO2429 COG0016 # Protein_GI_number: 16122649 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Yersinia pestis # 1 327 1 327 327 638 95.0 0 MPHLAELVAQAKAAVENAQDIATLDNVRVEYLGKKGHLTLQMTSLRELPAEERPAAGAVI NQAKQEVQDALNARKSDLESAALNARLAQETIDVSMPGRRMENGGLHPVTRTIERIETFF GELGFAVETGPEIEDDYHNFDALNIPAHHPARADHDTFWFDATRLLRTQTSGVQIRTMKE QQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDKDISFTNLKGTLHDFLNNFFEEDLQ IRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEIYSGFAFGMGME RLTMLRYGVTDLRAFFENDLRFLKQFK >gi|316920036|gb|ADCU01000003.1| GENE 20 20544 - 22931 2389 795 aa, chain + ## HITS:1 COG:YPO2428_2 KEGG:ns NR:ns ## COG: YPO2428_2 COG0072 # Protein_GI_number: 16122648 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Yersinia pestis # 140 795 1 656 656 1112 82.0 0 MKFSELWLREWVNPAISSEALSEQITMAGLEVDGVEPVAGEFNGVFVGEVVECGQHPNAD KLRVTKVNVGGERLLDIVCGAPNCRKGLKVAVATIGAVLPGDFKIKAAKLRGEPSEGMLC SFSELGISEDHDGIIELPADAPIGTDIREYLQLNDHTIEISVTPNRADCLGIIGVARDVA VLNKLALNEPAMDAVPAAIHDTFPITVESPEACPRYLGRVVKGINVKAATPLWMREKLRR CGIRSIDPVVDVTNYVLLELGQPMHAFDLNRLEGGIVVRMAKEGEKLTLLDGNEATLSSD TLVIADQQKALAMGGIFGGEHSGVNAETQDVLLECAYFNPLSITGRARRQGLHTDASHRY ERGVDPALQAKAMERATRLLIDICGGHAGPVIDVTNEAALPKRATITLRREKLDRLIGHH VADAQVTDILERLGCKVSFANNTWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDVPVK ADLIMTSHREANLPLKRVKTMLVDRGYQEAITYSFVDPKIQALLHPSEASLILPSPISVE MSAMRLSLWSGLLSAVVYNQNRQQSRVRLFETGLRFVPDSAANLGIRQDVMLAGVIAGNR YEEHWNLERQVVDFYDLKGDLEAILDLTGKLDDVQFKAEKNPALHPGQSAAIYLAGKRVG FIGVVHPDLERKLDLNGRTVVFEIEWEALAERRIPQAREISRYPANRRDIAVVVAENVPA EDILAECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLVLQDTTRTLEEEEIAATVAK CVEALKQRFQASLRD >gi|316920036|gb|ADCU01000003.1| GENE 21 22936 - 23232 309 98 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG] # 3 92 4 93 96 123 63 2e-27 MALTKAEMSEHLFEKLGLSKRDAKDLVEIFFEEVRRALENGEQVKLSGFGNFDLRDKNQR PGRNPKTGEDIPITARRVVTFRPGQKLKSRVENATPKE >gi|316920036|gb|ADCU01000003.1| GENE 22 23315 - 23512 320 65 aa, chain + ## HITS:1 COG:no KEGG:YE2589 NR:ns ## KEGG: YE2589 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 62 1 62 63 105 80.0 5e-22 MKVNDLVSVKTDGGPRRMGKIIEVEEFSEGIMYLVALDDYPNGVWFFNEIDSHDGTFVEP YHGDE >gi|316920036|gb|ADCU01000003.1| GENE 23 23548 - 24573 655 341 aa, chain + ## HITS:1 COG:YPO2425 KEGG:ns NR:ns ## COG: YPO2425 COG4139 # Protein_GI_number: 16122645 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type cobalamin transport system, permease component # Organism: Yersinia pestis # 30 335 25 330 335 378 74.0 1e-105 MQNSDMPMLSHFSLLQQRQQARDRSRLRILALFLLLAVIVSLCAGDLWLWPTQWFSESAK LFVWQIRLPRVIAVMAVGASLAVAGAVMQALFDNPLAEPGLLGVSNGAGVALVLAVLLGQ SLLPVWVLSTCAILGALAITAILMLFARRRYLTNSRLLLIGVALGIACSAVMTWAVYFSS SLDLRQLMYWLMGGFSGIDWRQKWLVLALVPIFLWLLRQGKVLNLMSLGDIQARQLGLSL VVWRNLLVVAIGWLVGVSVALAGVIGFIGLVVPHMLRLMGITDHRALLPACALGGAGVLL LADVVARVALFSAELPIGVVTSSLGAPVFIWMLLRPLNNKE >gi|316920036|gb|ADCU01000003.1| GENE 24 24583 - 25353 452 256 aa, chain + ## HITS:1 COG:YPO2423 KEGG:ns NR:ns ## COG: YPO2423 COG4138 # Protein_GI_number: 16122643 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type cobalamin transport system, ATPase component # Organism: Yersinia pestis # 6 249 4 247 253 230 51.0 2e-60 MSTKPLILHNVSVGTRLLPFSAQVERGALIHIIGPNGAGKSTLLARIAGILPGEGRVMLN QQNLDALTPAELARCRGYLHQQQQPSALMPVFQYLALHQPVGCDLALADRVVGDLATSLA LGDKLSRPLTQLSGGEWQRVRIAAICLQVWPALNPQASLLLLDEPMNSLDISQQAAVDQL LHQLTDAGISVIVSAHDLNHTQLHAHQVWMLRAGVMQDQGPTTEVMTVKSLSKLYGINFR ELESEGQRWFIYQNHI >gi|316920036|gb|ADCU01000003.1| GENE 25 25636 - 26784 1057 382 aa, chain + ## HITS:1 COG:YPO2422 KEGG:ns NR:ns ## COG: YPO2422 COG0399 # Protein_GI_number: 16122642 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Yersinia pestis # 1 379 1 379 384 572 73.0 1e-163 MKEFLPFSVPSMGEDEIAAVAEVLRSGWITTGPKCQQLESAFSQYVGAKHAIAVSSATGG MHVTLMALGIGAGDEVITPSQTWVSTLNVITLLGAEPVMIDVDRDTLMVQPAEIEAAITP KTKAIIPVHYAGAPADLTALREIAARHNIPLIEDAAHAVGTRFGDHMVGAQGTAIFSFHA IKNMTCAEGGMVVTDDDELADKVRCFKFHGLAVDAFDRQALGRKPQAEVVAPGYKYNLAD INAAIALVQLEKLPAMNARRQQLVARYLQALQGSPLLPLKVPAYPHQHAWHLFMVRVDES LCGIDRNTMMEKLKEHGIGTGLHFRAAHTQKYYREKYPDLSLPNTEWNSASLMTLPLFPD MQDSDVDRVVKALSDILESRCE >gi|316920036|gb|ADCU01000003.1| GENE 26 26777 - 27793 843 338 aa, chain + ## HITS:1 COG:YPO2421 KEGG:ns NR:ns ## COG: YPO2421 COG0463 # Protein_GI_number: 16122641 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Yersinia pestis # 12 334 5 327 327 536 79.0 1e-152 MSNNEVIKNEADEIKKVSIVIPVFNEQESLPILIKRTHAACELLNKPYEIILIDDGSHDD SAEILTQAAEIPENHIVAVLLNRNYGQHSAIMAGFNQVSGDLVITLDADLQNPPEEIPRL VATAEQGYDVVGTVRAKRKDTWFRKTASKMINMMIQKATGKSMGDYGCMLRAYRRPIIEA MLHCHERSTFIPILANTFARRTIEIDVRHDEREFGESKYSFLKLINLMYDLVTCLTTTPL RLLSIVGSVIALSGFTLAVLLIAMRLIFGPTWAAEGVFTLFAVLFTFIGAQFVGLGLLGE YIGRIYNDVRARPRYFVQKIVSADALKTHVSVEQQEEE >gi|316920036|gb|ADCU01000003.1| GENE 27 27793 - 29775 1896 660 aa, chain + ## HITS:1 COG:YPO2420_2 KEGG:ns NR:ns ## COG: YPO2420_2 COG0451 # Protein_GI_number: 16122640 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Yersinia pestis # 306 651 2 347 363 647 85.0 0 MKAIVFAYHDIGCAGLKALKEAGYEISAVFTHTDEPGENHFYGSVARVAAEMALPVYAPD NVNHPLWVDRIKALKPDVIFSFYYRNMLSQDILDIAPRGSWNLHGSLLPKYRGRAPVNWA LVHGETQTGVTLHQMTRKADAGDIAGQLAVEISSDDTALTLHSKIRDAAVALLGQQLPLI KNGDVKTTAQDESQATYFGRRTAADGLIDWSKPASTVHNLVRAVTEPYPGAFSYLGDRKI TVWRSRIVEDKSGSRPGTVLSAKPLVIACGENALEIVTGQSDAGLYAQGSQLANEMGIVA KVRLWDKPNSLIKRRTRVLILGVNGFIGNHLTERLLQDDNYDIYGLDIGSDAIERFIGNP RFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLKVFELDFEQNLKIVRDC VKYQKRIVFPSTSEVYGMCNDKDFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGAK NELNFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDI SDGIEALFRIIENKDDNCNGQIINIGNPDNEASIRELGEMLLDCFERHPLRSHFPPFAGF KEIESSSYYGKGYQDVEHRKPSISNAKRLLHWEPTVEMKQTVEETLDYFLRTVDLTGEAQ >gi|316920036|gb|ADCU01000003.1| GENE 28 29772 - 30692 564 306 aa, chain + ## HITS:1 COG:YPO2419 KEGG:ns NR:ns ## COG: YPO2419 COG0726 # Protein_GI_number: 16122639 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Yersinia pestis # 1 299 1 299 301 426 64.0 1e-119 MKRVGLRIDVDTFRGTRDGVPQLLTMLQKHEVLGSFFFSVGPDNMGRHLWRLLKPRFLWK MLRSQAASLYGWDILLAGTCWPGKLIGKPHELIIRHTASLGHEVGLHAWDHHGWQKNVGH WSDARLNQEFQRGLAEMQRILGYSVECSAVAGWRADQRVVDMKQSYPMRYNSDCRGREPF RPLLSNGKTGTVQIPVTLPTYDEAVGTLTTDAQFNDFIINAIKNDSGTPVYTIHAEVEGI VKAEMFEQLLIRLKAENIEFCPLSALLPNDWKQLPTGRIVRSSFEGREGWLGCQAPVAET PAETSL >gi|316920036|gb|ADCU01000003.1| GENE 29 30806 - 32338 1256 510 aa, chain + ## HITS:1 COG:YPO2418 KEGG:ns NR:ns ## COG: YPO2418 COG1807 # Protein_GI_number: 16122638 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Yersinia pestis # 1 509 44 554 554 626 61.0 1e-179 MLARGDWTVPHLLGLRYFEKPVAGYWINNISQWMFGDNNFAVRFGSVFCTALSTLLVFWL AMMIWKNTRTAILAAVIYFSMFLVYAVGTYSVLDPMITLWMSAAMVSFYLTLKATTNKGK IGGYVLLGIACGMGFMTKGFLALALPVISVLPIVIQQKRLKELFLFGPIAVVVAAILSAP WAWSIYLREPDFWNYFFWVEHIQRFAESDAQHKAPFWYYLPVLVAGVMPWLALLPGAIRH GWRGLHPDRFFLFSWFVMPFLFFSIAKGKLPTYILPCMAPLALLMAHYVSELIAQGKWRT LKVNAAINILFGGVLALAVIVMAVGNFKSSLYAPGESSEIVVGVLCFVGWAVFGCIALVK GAKYWLWSAACPLVLGLFIAQAVPQKIENSKNPQAFIADVMPQLASSRYVLSDEVGIAAG LAWELKRSDILMFDYSGELRYGLNYPDAKGHRINKDEFAAWLANARKEGNVSLMIHLSRD EPLDHEGLPKADSVEQRDRYVVLFYKKTPQ >gi|316920036|gb|ADCU01000003.1| GENE 30 32335 - 32679 263 114 aa, chain + ## HITS:1 COG:YPO2417 KEGG:ns NR:ns ## COG: YPO2417 COG0697 # Protein_GI_number: 16122637 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Yersinia pestis # 2 111 3 111 114 89 64.0 1e-18 MSYLLLLLASVFTCGGQLCQKQAVVCWQQKPPSSRLPTTLRWLLAACCALGIAMLLWLLV LQRMPLGIAYPMLSINFVLITLCAHYWFGEKASARHWCGVALIMFGIYLMSRGL >gi|316920036|gb|ADCU01000003.1| GENE 31 32679 - 33074 280 131 aa, chain + ## HITS:1 COG:YPO2416 KEGG:ns NR:ns ## COG: YPO2416 COG0697 # Protein_GI_number: 16122636 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Yersinia pestis # 3 123 2 121 128 110 57.0 6e-25 MSKGYFWAACSIVLVSVAQVLMKSGMADIPIISSLSMEPLTLLIAYATPLLIVSLGILGY VMSMVCWFCALRYLPLNRAYPLLSLSYALVYLAAVCLPWLNESVSWTKNAGVLAILLGVW LINSGKKESSH >gi|316920036|gb|ADCU01000003.1| GENE 32 33121 - 33384 308 87 aa, chain - ## HITS:1 COG:no KEGG:PMI1270 NR:ns ## KEGG: PMI1270 # Name: not_defined # Def: hypothetical protein # Organism: P.mirabilis # Pathway: not_defined # 1 87 1 87 87 61 56.0 7e-09 MKKLTLKDLNESQLQRVKVKQAQARKSLERPLTNAEQNKIKDEILNEIALELEKEAKKLR AEKKKQKVVPSNETFSWSKNNHSRGLR >gi|316920036|gb|ADCU01000003.1| GENE 33 33611 - 34075 263 154 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 34 154 59 174 175 105 42 5e-22 MRLGFLVVVASLVLAGCSHNAPPPSGKLSDSIAVVAQLNEQLRQWNGAPYRYGGLERNGV DCSGFVYRTFRDRFEMQLPRTTKQQTSLGTKVDRDELMPGDLVFFKTGSGESGLHVGIYD TDETFIHASTSKGVTRSSLDNVYWNKVYWQARRL >gi|316920036|gb|ADCU01000003.1| GENE 34 34301 - 35317 899 338 aa, chain + ## HITS:1 COG:STM4576 KEGG:ns NR:ns ## COG: STM4576 COG0095 # Protein_GI_number: 16767817 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Salmonella typhimurium LT2 # 1 338 1 338 338 576 79.0 1e-164 MTTLRLLISDSYDPWFNLAVEECIFRQMSPTQRVLFLWRNNDTVVIGRAQNPWKECNTRR MNEDGVKLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKSISTGIILDALHSLGLTAGASG RNDLIVTTADGERKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLHPDPKKLQAKGITS VRSRVANLVELMPDITHEQICDAVTESFFKHYGERVEAEHISPRYEPDMPNFSEQFLKQS SWEWNFGQAPAFNHQLDERFVWGGVELHFDVERGLITRAQMFTDSLNPAPLEALAERLQG VIYRSEEISAVVQQLAQDYPEQQTELRDLNQWLLQQVK >gi|316920036|gb|ADCU01000003.1| GENE 35 35407 - 36849 1083 480 aa, chain + ## HITS:1 COG:ydiU KEGG:ns NR:ns ## COG: ydiU COG0397 # Protein_GI_number: 16129662 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 4 480 5 478 478 628 64.0 1e-180 MTPFINSYHDELPGFYTELKPTPLKDARVLYHSQPLAAELGLDAEFFSGESAAVLRGESL LEGMNPIAQVYSGHQFGVWAGQLGDGRGILLGEQQLPDGRKYDWHLKGAGLTPYSRMGDG RAVLRSVIREFLASEALHHLGIPSSRALSIVTSQQPVFREQPERGAMLLRVAESHLRFGH FEHFYYREQPDEVRKLADYAIRHHWPHLVDDKDRYVLWLRDITERTARMIALWQSQGFAH GVMNTDNMSILGLTIDFGPYAFLDDYQPDFICNHSDYQGRYAFDNQPAVAYWNLHRLGQA LSGLISADQIRGALDAYEPALMVAFGEQMRQKLGFFSRQNQDNDLLTELLSLMAKEGRDY TRTFRALSDVVLSDSTMALRDDFIDRAAFDGWHQKWRLRLQQDGVDDVTRQTQMKAVNPK RILRNYLAQNAIEAAEKDDVSVLTRLHQGLQNPYEDDAAFDDLSALPPDWGKKLEISCSS >gi|316920036|gb|ADCU01000003.1| GENE 36 37959 - 38780 239 273 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 14 245 2 229 245 96 27 3e-19 MDKRSEIQLTSPALQAHSISYHLGQRRLIKQVSLSLQSGEMVAIIGPNGAGKSTLMRLLT GFLPPSEGHCELQQRPLDEWSPRQLARTRAVMRQHSDLAFAFSVREVVAMGRSPYPNQGR GGEHNLRAVEHVMAQTGCDILADRDYRALSGGEQQRVQLARVLAQLWQPEPQPRWLFLDE PTSALDLYHQQQTLRLLKSLTRSEPLGVCCILHDLNLAALYADRILLLHQGQLVAQGTPQ EVLSDDTLTRWYHADLGVMPHPECGEPQVYLRR >gi|316920036|gb|ADCU01000003.1| GENE 37 38773 - 39774 905 333 aa, chain - ## HITS:1 COG:YPO0280 KEGG:ns NR:ns ## COG: YPO0280 COG0609 # Protein_GI_number: 16120619 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Yersinia pestis # 3 333 4 334 334 414 76.0 1e-115 MTKVSPRIAFSVLIVLLLALGLGSANMGALRLSFHTLWETPLDDAMWQVWLNIRLPRVLL ATVVGIALAVSGAIMQGLFRNPLADPTLLGISSGASLCVALVIVMPMTLAPTLALYSHML AAFGGSLIISLLIYGLSRGGHGSLSRLLLAGIAINALCFALVGVLSYISNDQQLRQFSLW SMGSLGQAQWGTLLAATSLILPASAAALLMARRLNLLQLGDEEAHYLGINVAKTKRQLLL LSAVLVGAAVAVSGVIGFIGLVIPHLVRMRLGADHRWLLPCSALGGACLLLTADTLARTL ASPAEMPVGMLTSLIGGPYFLWLILRQKEFNVG >gi|316920036|gb|ADCU01000003.1| GENE 38 39771 - 40610 826 279 aa, chain - ## HITS:1 COG:YPO0281 KEGG:ns NR:ns ## COG: YPO0281 COG4558 # Protein_GI_number: 16120620 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type hemin transport system, periplasmic component # Organism: Yersinia pestis # 11 278 14 279 279 310 65.0 1e-84 MTLARRLAAVLSAPLMVVFSMNAVAADRIVSVGGDVTEIVYALGAGDRLVARDTTSTLPA AQKLPDVGYMRQLNAEGILSLKPTMVLATELAEPSLVLRQIADVGVKVVPVSGKASLENV PHKIQQVASALNLEKQGAEVAQKYEQQLAAIPHTPLKTKVLFILSHGGMTPMAAGQDTAA DAIIKASGAQNAMQGFSRYRPLSQEGVVASAPDLILLTTDGFKTLGNVNKVWELPGMALT PAAKNKQILVVDDMALLGFSLKTPEALAALRQAAERAQR >gi|316920036|gb|ADCU01000003.1| GENE 39 40607 - 41644 852 345 aa, chain - ## HITS:1 COG:YPO0282 KEGG:ns NR:ns ## COG: YPO0282 COG3720 # Protein_GI_number: 16120621 # Func_class: P Inorganic ion transport and metabolism # Function: Putative heme degradation protein # Organism: Yersinia pestis # 1 334 1 335 345 498 73.0 1e-141 MTSALYEQYLTAKEQNSGKYARDLAAILNVSEAELTHARVGHGARRLNADARTLLAALES VGEVKAITRNEYAVHEQLGSYENQHLHGHAGLILNPGSIDLRLFLQHWSSAFTLAEESRN GERHSVQFFDAQGDALHKVYTTPNTDMTAWNDLIGRFVSDENPALEIQPIAHETKNSRID NAVIDSEWRAMTDVHQFFQLLGRHNLSRQQAFAAVGDDLAYRVDNSALTHLLNTAKEDQN EIMVFVGNRGCVQIFTGKIERVVPHHEWINIFNARFTLHLIETAIAESWITRKPTKDGFV TSLEIFAEDGTQIAQLFGQRTEGQPEQEQWRTQINGLPRLNGVAA >gi|316920036|gb|ADCU01000003.1| GENE 40 41769 - 43889 1942 706 aa, chain - ## HITS:1 COG:YPO0283 KEGG:ns NR:ns ## COG: YPO0283 COG1629 # Protein_GI_number: 16120622 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Yersinia pestis # 8 706 3 676 676 899 66.0 0 MSCSTRARLARSTFSPSRLSIAVACALPLFAHADTLVDTPASSTSQEIAYTGNTPAGGKD SNRQQSVMTVTATGNERDSFEAPMMVSVLENNDPETMTASSAPDMLRHIPGVTISGGSRA NGQDISMRGYDRRGVLVLVDGVRQGTDTGHLNGTFLDPALIKRVEVVRGPGALLYGSGAL GGVISYETVDAADLLMPGKNTGYRVFGTAGTQDHSLGMGASAYGKTDDLDGIISFSTRDR GNLRMSNGFNSPNDETISNVLTKGTWTIDENQSLSGDLRYYNNAAREPKNPQTENAGTGN VMTDRSTIQRDAQATYKLKPVGQDWLDATLTGYTSEVKINASPTGTSYEERKQTTNGAKL ENRSRLFADSFASHLLTYGTEAYKQKQTPGGATTGFPQADIKFASGWLQDEITLRDLPVD IVAGTRYDNYKGSSDGYDDVNADKWSSRAAMTINPTDWLMIFGSYAQAFRAPTMGEMYND ALHFQMGPGMANYWKPNPNLKPETNETQEVGFGLRFDDVLMANDSLKFKSSYFGTKAKDY IKTQVTMDMGFVNGRFGCIDCSTTSTNIDRAKIWGWDAAMEYQTDWFDWSLAYNRTRGKD QKTGEWLDNINPDTVTSQVNVPISTTGFSVGWVGTFADRNNQVNAGTAPQAGYGVNDFYV SYKGKDSFNGMTTSVVLGNAFDKEYYSSQGVIQDGINGKLLVSYQW >gi|316920036|gb|ADCU01000003.1| GENE 41 44006 - 44209 208 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKPNIDPQSVDLLNLSTHQSPTLYTSAAATIDSHALLGDEGKVIIQHQGEQYQLRQTKS GKLILTK >gi|316920036|gb|ADCU01000003.1| GENE 42 44323 - 44940 560 205 aa, chain - ## HITS:1 COG:YPO0284 KEGG:ns NR:ns ## COG: YPO0284 COG0702 # Protein_GI_number: 16120623 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Yersinia pestis # 1 203 1 209 216 232 56.0 4e-61 MTPWLIFGAGSGVGAELVTLGLHEKRPIFALVRNPEQADTLRKKGVTVLEGDALNVDQVE KICRMAGEKARIVSTLGSREGDYLGNRLIIDTAERCGLTHMMLVTSIGCGDSWPTLSERA KKAFGQAVREKSLAECWLQTSQLQSCILRPGGLFNGEATGNGQCIQGEAHGLIRRADVAL LIQMLIDDESSYGKIFALIDPMLKP >gi|316920036|gb|ADCU01000003.1| GENE 43 44937 - 45461 463 174 aa, chain - ## HITS:1 COG:ECs4384 KEGG:ns NR:ns ## COG: ECs4384 COG3721 # Protein_GI_number: 15833638 # Func_class: P Inorganic ion transport and metabolism # Function: Putative heme iron utilization protein # Organism: Escherichia coli O157:H7 # 12 166 6 160 164 203 58.0 1e-52 MSTPSSAQQHDLMAYLSTNPDGTVEDIAKRYNVTPLDVIRLTPGAQIFDGAQFDMVWDEI TQWGDVTTLVNNDDLILEFHGELPTGTHRHGFFNLRGKKGLSGHIRATHCRHIALVERPF MGMDTASVWFINEAGRAMMKIFVGRDSHRKLLTEQLDAFRALPSKIATKLESCV >gi|316920036|gb|ADCU01000003.1| GENE 44 45458 - 46786 1083 442 aa, chain - ## HITS:1 COG:YPO0286 KEGG:ns NR:ns ## COG: YPO0286 COG0635 # Protein_GI_number: 16120625 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Yersinia pestis # 1 431 1 431 437 607 65.0 1e-173 MYLDLAPYFAAEEGIPFRDRWATMPWRNQKPVSPESVDQHWQSILNSSVEANKRLLYLHI PFCATHCKFCGFYQNKLETEATEQYCDYLVREIEIEASSPLHQSAPIHAIYFGGGTPTAL SASQLHRIISTLKRLLPLAPDCEITVEGRILNFDDERVDACLEAGANRFSIGIQTFNTRI RQRMGRRAAGEEAVVFMRQLAERDRAAVVCDLMFGLPEQTMQDWQNDLDIVSDLPLDGVD LYALNLLPSTPLGKAVENKRVTLPDVTQRRDFYLTGEAFLADEGWRQLSNSHWARTTRER NLYNLLIKQGADCLAFGSCAGGNIDGQSYVMERSLERYYQKLDEGRKPIMMMTSRSEQHR WRLALQGGIEVGHFDLKRVLPDPSPLLPLLQQWQKCGLMQVNGTRFRLTPAGRFWASNLM QALQTLVPQLLETKQPILEPTA >gi|316920036|gb|ADCU01000003.1| GENE 45 46981 - 48042 764 353 aa, chain - ## HITS:1 COG:YPO2411 KEGG:ns NR:ns ## COG: YPO2411 COG0722 # Protein_GI_number: 16122633 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Yersinia pestis # 3 350 1 348 348 597 81.0 1e-170 MVMHKTDELRTARIDTLVTPEELAQQLPVGLQVAENVTASRKRIEHILSGDDKRLLVIVG PCSIHDINAAVDYAQRLSAMRDKYQDRLEIVMRTYFEKPRTVIGWKGLISDPDLNGSYRV NHGIRLARELLLKVNELGVPTATEFLDMVTGQYIADLISWGAIGARTTESQIHREMASAL SCPVGFKNGTDGNTRIAIDAIRAARSSHMFLSPDKHGQMTIYQTSGNPYGHIIMRGGKTP NYHADDIASACDSLREFDLPEHLVIDFSHGNCQKMHRRQLDVAANVGQQIRDGSQAIVGV MAESFLVEGTQKNVPGQSLTYGQSITDPCLSWKDTETLLELLADAVSARLSSS >gi|316920036|gb|ADCU01000003.1| GENE 46 48294 - 49115 575 273 aa, chain - ## HITS:1 COG:YPO2410 KEGG:ns NR:ns ## COG: YPO2410 COG1806 # Protein_GI_number: 16122632 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 273 1 273 273 457 81.0 1e-129 MERSVFYISDGTAITAEVLGHAVLSQFPVDITSFTLPFVETETRAEAVCQQINDIYHRTG SRPLVFYSIVSPKIREIIHSSEGFCQDIVRSLVAPLQDELGMSPVHVANLTHGLTEHNLL KYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFT ADDMDNLQLPPALKAHQHKLFGLTINPDRLAAIREGRRENSRYASMRQCRLELAEVEALY RKNQIRYLNTTNHSVEEIATKILDTLGLSRRMY >gi|316920036|gb|ADCU01000003.1| GENE 47 49236 - 49583 301 115 aa, chain - ## HITS:1 COG:no KEGG:Hneap_0285 NR:ns ## KEGG: Hneap_0285 # Name: not_defined # Def: hypothetical protein # Organism: H.neapolitanus # Pathway: not_defined # 1 115 1 115 115 82 37.0 5e-15 MIFTESELQDITRCMDLFLSKRRPAENMRHESDLQYRIKGHDIDIYELHATDDSKKSKMV EHPSIKITYVEDTKQWTLYWMRPNAEWHLYQDDTVPSFSIAMRIVDRDEFGCFFG >gi|316920036|gb|ADCU01000003.1| GENE 48 49962 - 50828 451 288 aa, chain - ## HITS:1 COG:no KEGG:CCNA_02953 NR:ns ## KEGG: CCNA_02953 # Name: not_defined # Def: N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase (EC:2.4.1.150) # Organism: C.crescentus_NA1000 # Pathway: not_defined # 1 275 26 299 322 320 54.0 4e-86 MLAYFLLVHRYPNQFKRLFKAIYHADNQYVVHIDKSSSEEIHQDIHHFLSEYPNASLIES MDANWGGYSLVDAELRGMKMLLEKSDSWEFFINLSGQDFPLQSQENICQFLKKNKGRNFI KMSNQKDTRPETLHRIEKYVEESGCNITEVPSRNRPFMKDVTPYIGNQWMILCREFCEFV THSDEIKKFRDFYRHSLIADEGFFQTVLMNTSYPPSVINDDKRAIDWIPMGDIKLRPRDF TSLDEKQLCSSKNLFARKFDETIDSDILTILEKHITMPQSFIPAKNII >gi|316920036|gb|ADCU01000003.1| GENE 49 51411 - 53786 2477 791 aa, chain + ## HITS:1 COG:YPO2409 KEGG:ns NR:ns ## COG: YPO2409 COG0574 # Protein_GI_number: 16122631 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Yersinia pestis # 1 790 1 790 794 1407 85.0 0 MSSNGPDLHNVLWYNQLGMHDVDRVGGKNASLGEMITNLSELGVSVPNGFATTAQAFNDF LEQSGVNQRIYELLDKTDIDDVAQLAKAGAQIRQWVVETPFTPELERDIRSAYQQLAQDN ADASFAVRSSATAEDMPDASFAGQQETFLNVQGIEAVMVAVKHVFASLFNDRAISYRVHQ GYDHRGVALSAGVQLMVRSDLAAAGVMFTIDTESGFDQVVFITSAYGLGEMVVQGAVNPD EFYVHKPTLQNGKPAIVRRTMGSKKIRMVYADSQEHGKQVRIEDVEEAARNRFSLNDHEV EQLAHQALMIEKHYGRPMDIEWAKDGHTGKLYIVQARPETVRSNEQVMERYQLTGHSEVL TEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVLVTDMTDPDWEPIMKKASAIVTNRGGRT CHAAIIARELGIPAVVGCGDATDHLKDGQKVTVSCAEGDTGYVYSDMLDFTVHSSQVSTM PELPLKIMMNIGNPDRAFDFARLPNEGVGLARLEFIINRMIGVHPRALLEFDQQDAETQA EIKQMMQGYDSPVEFYVGRLTEGIATLAAAFWPKRVIVRLSDFKSNEYANLVGGERYEPH EENPMLGFRGAGRYVADSFKDCFALECAAVKRVRNDMGLTNVEVMIPFVRTVAQAEAVVN QLASEGLKRGENGLKVIMMCEIPSNALLAEQFLEYFDGFSIGSNDMTQLTLGLDRDSGVV SELFDERNEAVKALLSMAIRAAKAQGKYVGICGQGPSDHEDFARWLMDEGIDSLSLNPDT VVQTWINLSEK >gi|316920036|gb|ADCU01000003.1| GENE 50 54330 - 55430 839 366 aa, chain - ## HITS:1 COG:YPO2408 KEGG:ns NR:ns ## COG: YPO2408 COG0628 # Protein_GI_number: 16122630 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Yersinia pestis # 5 366 6 367 367 465 69.0 1e-131 MYNSQHKYDLPRIMFGVLFVSLMIVACLWVVRPFILGFAWASMIVIATWPVLIKLQNIFW GKRWIAVLLMTMLLLLLFIIPIALVIGSLIDNSGPVLDWASSAKNWSVPDLLWLKSIPAV GHKLYNSWHSMLAGGGSIIIAKIQPYIGQTITWFVAQAAHVGSFVLHCSLMLLFSALLYS RGEDVALGIRHFAIRLGSDRGDAAVVLAAQAIRAVALGVVVTALVQSVLGGIGLAISGIG YATLLTVLMFICCLAQLGPLLVLVPAIIWLYWTGDTTWGTVLLVWSCVVGTLDNFLRPAL IRMGADLPMILILSGVIGGLLAFGMIGLFIGPVVLAVSYRLVSAWVHEAPEPSKDVEQVA KELDQL >gi|316920036|gb|ADCU01000003.1| GENE 51 56114 - 59170 2708 1018 aa, chain + ## HITS:1 COG:ZydiJ_1 KEGG:ns NR:ns ## COG: ZydiJ_1 COG0277 # Protein_GI_number: 15802099 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli O157:H7 EDL933 # 1 542 1 542 542 962 83.0 0 MIPQISQAPGLVQRVLDFLQSLKDSGFTGDTDTSYAARLTMATDNSIYQLLPDAVLFPRS TSDVALIARLASEEPYRTLVFTPRGGGTGTNGQSLNRGIVVDMSRYMNRILEINPQEGWV RVEAGVIKDQLNQYLKPYGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLAL RTVLLGGELLDTAPIPVELAEKLANSGTKSGNIYRAVLDSCRDNRALIIEKFPVLNRFLT GYDLRHVFSDDLQTFDLTRIITGSEGTLTFVTEAKLDITPIPKVRRLVNIKYDSFDSALR NAPYMVEAKALSVETVDSRVLNLAREDIVWHSVSELILDVPDKEMLGLNIVEFAGDDAAL IDERVAALCQRMDELMATQQAGVIGYQVCEELAGIERIYAMRKKAVGLLGNAKGQAKPIP FVEDTCVPPQHLADYIAEFRALLDSHQLTYGMFGHVDAGVLHVRPALDMCDPQQEMLMKT LSDNVVELTAKYGGLLWGEHGKGFRAQYSPAFFGEALFTELRRVKAAFDPDNRLNPGKIC PPLGCDEPMMQVDAAKRGTFDRRIPLEVRSEFRGAMECNGNGLCFNFDVRSPMCPSMKIT GDRIHSPKGRATLVREWLRLLSEQGVDPLTLEQTLGEQSTVRAMIEKTRNTWHAKKGEYD FSHEVKEAMSGCLACKACSTQCPIKIDVPGFRSRFLQLYHTRYLRPVRDYLVAGVESYTP LMAKAPKVFNFFFSQPWLRKMSEKRIGMVDLPLLSTPTLKQSLAGHSAYQTTLEQLEKLG ESDRQRHVLIVQDPFTTYYDAQVVADFVRLVERLGFQPVLLPFSPNGKAQHIKGFLTRFA KTAQKTADFLNRIARLGMPMVGVDPALVLCYRDEYREILGQQRGDFSVQLVHEWLLKALP ERETLPPQTGEAWYLFGHCTETTALPASTQQWQKIFARYGATLENVSVGCCGMAGTYGHE SKNLANSLGIYELSWHQALQRLPRQRCLAPGYSCRSQVKRIEGNGLRHPLQALLEIVR >gi|316920036|gb|ADCU01000003.1| GENE 52 59167 - 59586 289 139 aa, chain + ## HITS:1 COG:ydiI KEGG:ns NR:ns ## COG: ydiI COG2050 # Protein_GI_number: 16129642 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 1 136 1 136 136 216 75.0 1e-56 MIWKRAATLEQLNQIGHDCMVGHLDIQITRIGDDELEGTMPVDHRTTQPFGLLHGGASVV LAETLGSLAGYLCTEGKQQVVGLEINANHIRSAREGRVRGVCKAIHIGRRHQVWQTEIFD EQNRLCCTSRLTTAVIETA >gi|316920036|gb|ADCU01000003.1| GENE 53 59713 - 60732 685 339 aa, chain + ## HITS:1 COG:YPO2338 KEGG:ns NR:ns ## COG: YPO2338 COG0598 # Protein_GI_number: 16122562 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Yersinia pestis # 13 339 1 327 327 499 74.0 1e-141 MFWQYKGDVVTDVNVISGEQLKIQDAVYALQLDGKGGSVPVTDLTQASCEHPCWLHLDYA REESQNWLNSTSLLPDSVRECLGGESMRPRVTRLGDGTMITLRSINFNNDSRPDQLVVIR LYMTDKLVVSTRHRKVYAIDEVLTDLQNGTGPVSSGDLLVQVADALTDHASEFIEDLHDK IIDLEDNLLDQQTPERGQLALIRKQLIVLRRYMAPQRDVFARLASERLPWMTDDDRRRMQ DISDRLGRGLDDLDGSIARTAILADEISNLMADAMNRRTYTMSLLAMLFLPTTFLTGLFG VNLGGIPGNTSPVAFATFCFLLVLLCVCVVVWLKRSKWL >gi|316920036|gb|ADCU01000003.1| GENE 54 61128 - 61442 147 104 aa, chain + ## HITS:1 COG:BMEI0152 KEGG:ns NR:ns ## COG: BMEI0152 COG2329 # Protein_GI_number: 17986436 # Func_class: R General function prediction only # Function: Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides # Organism: Brucella melitensis # 1 104 1 104 120 115 56.0 2e-26 MIAVIFEANSHLDKQARYLEIASELRPLLERIDGFIAIERFQSLLEPGKILSLSWWRDEE SVLAWKKNVFHQEAQAEGRESIFSYYRIRVAHVFRDYSSENRGK >gi|316920036|gb|ADCU01000003.1| GENE 55 61445 - 61834 402 129 aa, chain + ## HITS:1 COG:no KEGG:Pecwa_1570 NR:ns ## KEGG: Pecwa_1570 # Name: not_defined # Def: ACT domain protein # Organism: P.wasabiae # Pathway: not_defined # 1 127 1 127 130 176 67.0 3e-43 MYDMHIILKNSPGELAWLGKTLALNGIGIEGGGVFALGGESHAHFLVADGYKAKTVLESE GFRVYGVCRPLIRVLRQERLGELGAIAAALSEKGVNILTQYSDHANQLILITDNDIIAQQ ATEKWAVKV >gi|316920036|gb|ADCU01000003.1| GENE 56 61840 - 62547 282 235 aa, chain + ## HITS:1 COG:BMEI0150 KEGG:ns NR:ns ## COG: BMEI0150 COG0640 # Protein_GI_number: 17986434 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Brucella melitensis # 20 225 29 236 243 150 40.0 2e-36 MHNTINAEQFTRADVLEDAMSGVAAAMSDPSRVKILCALMDGRAWTATELAAVTDVASST ASAHLNRLLTNKLIICLSQGRHRYYRLAGKETAELIEMMMGISWQLHPTPVTRTPIELRM LRTCYDHLAGEIAVKIYDAMSHAGWFGADGTFLTDEGFRQFKILGIDLEHKTKRKICCGC LDWSERRFHLGGEAGAQFFALCEHKHWLQKVAGFRQVNMTSNGRKAIARLFQIEC >gi|316920036|gb|ADCU01000003.1| GENE 57 62603 - 63541 1051 312 aa, chain - ## HITS:1 COG:STM1654 KEGG:ns NR:ns ## COG: STM1654 COG0037 # Protein_GI_number: 16764998 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Salmonella typhimurium LT2 # 1 312 1 311 311 574 88.0 1e-164 MSEDQTISKKEQYNLNKLQKRLRRNVGEAIVDYNMIEEGDRIMVCLSGGKDSYTMLEILR NLQQSAPINFSLVAVNLDQKQPGFPEDILPAYLDSIGVEYKIVEENTYGIVKEKIPEGKT TCSLCSRLRRGILYRTATELGATKIALGHHRDDMLQTLFLNMFYGGKLKGMPPKLMSDDG KHIVIRPLAYCREKDIERFAEARAFPIIPCNLCGSQPNLQRQVIKDMLRDWDRRHPGRIE TMFSAMQNVVPSHLADTNLFDFKGIQHGSEVVDGGDLAFDREELPLVPVGLTEDEDAPNF DNAIRLDVVEVK >gi|316920036|gb|ADCU01000003.1| GENE 58 64019 - 64756 548 245 aa, chain + ## HITS:1 COG:RSp1517 KEGG:ns NR:ns ## COG: RSp1517 COG2964 # Protein_GI_number: 17549736 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 21 237 6 210 214 84 27.0 2e-16 MKTMLNEPCLSDTTDPAIITERRLVLKVLRSALQMLGCVVGRNTEVVLHDLTHPENSVID IVNGHVSGRRIGSSVLSGPQNDRGFSAVMQEIKNESCGEPSVVGGYETLTPTGKKLRSAT VVYRDAQGHPFASLCVNADISGIEAAQACLAQLLASGIQTTEHPVSEPPDMEILMAEIIQ DAMQCTDVKNGVMNKKAKLQAVRQMQERGIFIVKGGVEKAAKALGVTRYTIYNYLEEIRQ SQTRV Prediction of potential genes in microbial genomes Time: Wed May 18 14:52:22 2011 Seq name: gi|316919999|gb|ADCU01000004.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.4, whole genome shotgun sequence Length of sequence - 43416 bp Number of predicted genes - 37, with homology - 36 Number of transcription units - 27, operones - 6 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 89 - 304 68 ## SbBS512_E3230 putative IS1 encoded protein + Prom 315 - 374 2.0 2 1 Op 2 . + CDS 400 - 618 182 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 643 - 698 1.2 3 2 Tu 1 . - CDS 701 - 1117 257 ## Veis_0051 hypothetical protein - Prom 1141 - 1200 7.9 - Term 1296 - 1328 4.0 4 3 Tu 1 . - CDS 1360 - 2502 1256 ## COG3203 Outer membrane protein (porin) - Term 2798 - 2825 0.1 5 4 Tu 1 . - CDS 2852 - 4915 1205 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Prom 4936 - 4995 2.9 - Term 5307 - 5338 1.5 6 5 Tu 1 . - CDS 5366 - 8899 2917 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 9124 - 9183 5.8 - Term 9129 - 9193 13.2 7 6 Tu 1 . - CDS 9209 - 9865 363 ## PROTEIN SUPPORTED gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 - Prom 9920 - 9979 6.5 + Prom 9865 - 9924 6.5 8 7 Tu 1 . + CDS 10150 - 10413 316 ## COG3042 Putative hemolysin + Term 10446 - 10479 0.3 - Term 10433 - 10467 2.1 9 8 Tu 1 . - CDS 10491 - 10919 204 ## PROTEIN SUPPORTED gi|163801140|ref|ZP_02195040.1| 50S ribosomal protein L25 - Prom 11003 - 11062 5.3 + Prom 10982 - 11041 7.4 10 9 Tu 1 . + CDS 11128 - 11673 253 ## PROTEIN SUPPORTED gi|227998593|ref|ZP_04045604.1| acetyltransferase, ribosomal protein N-acetylase + Prom 11689 - 11748 1.8 11 10 Tu 1 . + CDS 11776 - 11997 216 ## Spro_3094 glycogen synthesis protein + Term 12006 - 12034 -1.0 - Term 12034 - 12071 5.5 12 11 Tu 1 . - CDS 12099 - 13091 951 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 13114 - 13173 5.4 + Prom 13250 - 13309 3.9 13 12 Op 1 . + CDS 13338 - 15956 1883 ## Spro_2599 hypothetical protein 14 12 Op 2 . + CDS 15949 - 16143 181 ## Spro_2598 hypothetical protein 15 12 Op 3 . + CDS 16154 - 16480 351 ## COG3784 Uncharacterized protein conserved in bacteria + Term 16503 - 16549 5.2 - Term 16497 - 16529 3.0 16 13 Tu 1 . - CDS 16609 - 17214 791 ## COG1182 Acyl carrier protein phosphodiesterase + Prom 17284 - 17343 4.8 17 14 Tu 1 . + CDS 17566 - 21453 3597 ## COG1643 HrpA-like helicases + Term 21470 - 21520 0.2 - Term 21288 - 21322 4.1 18 15 Tu 1 . - CDS 21431 - 22303 484 ## COG3591 V8-like Glu-specific endopeptidase + Prom 22666 - 22725 7.1 19 16 Tu 1 . + CDS 22760 - 23530 695 ## COG0500 SAM-dependent methyltransferases + Term 23534 - 23572 3.5 + Prom 23747 - 23806 5.6 20 17 Op 1 . + CDS 23963 - 24598 246 ## Coch_0288 hypothetical protein 21 17 Op 2 . + CDS 24602 - 24751 83 ## + Term 24800 - 24839 0.2 22 18 Op 1 . - CDS 24748 - 25914 654 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 25951 - 26010 3.7 23 18 Op 2 1/0.400 - CDS 26012 - 27499 1295 ## COG2317 Zn-dependent carboxypeptidase 24 18 Op 3 40/0.000 - CDS 27550 - 28878 1100 ## COG0642 Signal transduction histidine kinase 25 18 Op 4 1/0.400 - CDS 28885 - 29598 546 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 26 18 Op 5 . - CDS 29689 - 30411 672 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 30611 - 30670 10.4 + Prom 30804 - 30863 8.6 27 19 Tu 1 . + CDS 31091 - 31510 311 ## Spro_2588 hypothetical protein + Term 31549 - 31593 10.1 - Term 31536 - 31582 6.7 28 20 Tu 1 . - CDS 31599 - 32939 1097 ## COG0531 Amino acid transporters - Prom 33092 - 33151 5.3 - Term 33217 - 33247 5.0 29 21 Tu 1 . - CDS 33269 - 34219 890 ## Spro_2586 hypothetical protein - Prom 34365 - 34424 4.2 30 22 Op 1 17/0.000 + CDS 34846 - 36375 1400 ## COG3288 NAD/NADP transhydrogenase alpha subunit 31 22 Op 2 . + CDS 36386 - 37777 1344 ## COG1282 NAD/NADP transhydrogenase beta subunit + Term 37790 - 37838 6.8 32 23 Tu 1 . - CDS 37827 - 39110 634 ## COG0477 Permeases of the major facilitator superfamily - Prom 39228 - 39287 6.8 + Prom 39184 - 39243 4.6 33 24 Tu 1 5/0.100 + CDS 39280 - 40185 191 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 + Prom 40236 - 40295 3.8 34 25 Tu 1 3/0.200 + CDS 40326 - 41546 228 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase + Term 41690 - 41731 2.3 + Prom 41556 - 41615 2.8 35 26 Tu 1 . + CDS 41775 - 42440 756 ## COG0132 Dethiobiotin synthetase 36 27 Op 1 . - CDS 42451 - 42918 274 ## COG0038 Chloride channel protein EriC 37 27 Op 2 . - CDS 42980 - 43381 188 ## COG1662 Transposase and inactivated derivatives, IS1 family Predicted protein(s) >gi|316919999|gb|ADCU01000004.1| GENE 1 89 - 304 68 71 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E3230 NR:ns ## KEGG: SbBS512_E3230 # Name: not_defined # Def: putative IS1 encoded protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 35 71 1 37 37 65 97.0 8e-10 MAENRVEANAHNAGGCPASNAIHGHINDFLVRTGLRSGVSELQLPCFTAVRAEIALMSGS AFAVTHHPVSS >gi|316919999|gb|ADCU01000004.1| GENE 2 400 - 618 182 72 aa, chain + ## HITS:1 COG:PA3123 KEGG:ns NR:ns ## COG: PA3123 COG0251 # Protein_GI_number: 15598319 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pseudomonas aeruginosa # 1 70 53 122 125 84 52.0 4e-17 MQSIAKTLKECGSDMDSIVKVTVWLSDMKHFAEFNQVYATYFKHGYPARSAISCELVMGL DVEVEVQAMIKK >gi|316919999|gb|ADCU01000004.1| GENE 3 701 - 1117 257 138 aa, chain - ## HITS:1 COG:no KEGG:Veis_0051 NR:ns ## KEGG: Veis_0051 # Name: not_defined # Def: hypothetical protein # Organism: V.eiseniae # Pathway: not_defined # 2 138 3 141 145 99 39.0 5e-20 MYEDNEMKIYIILNRNHEVSTLMNAASHLSAGITDCAKEMLFDAYPNASSGLQANMSHYP VVVLQAKNSSQLASAVQKAKDAEITYNFFTNTMLSHSAEQQIADTLNTEIDNLDFIAIAL FGNTEKLKPITKKFSVYK >gi|316919999|gb|ADCU01000004.1| GENE 4 1360 - 2502 1256 380 aa, chain - ## HITS:1 COG:STM1473 KEGG:ns NR:ns ## COG: STM1473 COG3203 # Protein_GI_number: 16764819 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 1 380 1 377 377 473 75.0 1e-133 MKRKVLAMVIPALLAAGAAHSAEVYNKDGNKLDVYGKVDGLHYFSDDSSKDGDQSYVRVG FKGETQITDQLIGYGQWEYNVQVNNTEGNGSDGNFTRLGFAGLKFGDYGSFDYGRNYGVL YDVEGWTDMLPEFGGDSYTQADNFMTGRTNGVATYRNNGFFGLVDGLNVAVQYQGKNDGT NNDNEKLSNNSRDVQHQNGDGYGLSTTYDFGMGISAGASYASSDRTDQQSNQSTARGDKA DAWTVGLKYDANNVYLATMYAETNNMTPYGDGDSNQIANKTQNFEVTAQYQFDFGLRPEV SYLQSKGKDLYSANAQTSANSIGDKDLVKYVSVGTTYYFNKNMSTYVDYKINLLDNDDSF YKDNGISTDDVVAVGLVYQF >gi|316919999|gb|ADCU01000004.1| GENE 5 2852 - 4915 1205 687 aa, chain - ## HITS:1 COG:aegA_2 KEGG:ns NR:ns ## COG: aegA_2 COG0493 # Protein_GI_number: 16130393 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 203 674 2 473 479 734 73.0 0 MNRFVIADAKNCIGCRACEVACVMAHNHGEHVLTPAQFQPRIHVLKIEHKHTAVLCRHCE DAPCANVCPNHAIEKRDDSIQVIQEKCIGCKTCVVACPFGAMEVITHPAPSETQPDGVFA NAHKCDLCAGVADEPSCVASCPSNALKLIDDHVLNNLRHQRQLRAMMNDDSGLLFDGSAS KTIQSAPPIIMPATSAKTKGKTSKVPQMLNTPARHDPVKKPIAIRKAQFVEIYPTFTQEE ASGQASRCLSCGSHSVCEWTCPLHNRIPHWVKLVKEGRILEAVELSHQTNCLPEVTGRVC PQDRLCEGSCTLGNEFGAVTVGNIERFISDKAFEMGWTPDLSYVKPVDKRVAIIGAGPAG LGCADILARNGIKAVVFDRHPEIGGLLTFGIPSFKLDKSILAHRREIFSAMGIEFRLNTE IGRDITLTELLDEYDAVFVGTGTYQSMKAGLENEDADGVHDALPFLIANTKQVMGLPELP DEPYISMANKRVVVLGGGDTAMDCVRTSIRHGAETVTCAYRRDEANMPGSKKEVKNAREE GVEFEFNVQPLSIEIDDEGKVTGIRMLRTVMGEPDAAGRRRPKPVPGSEFVMPADAVVIA FGFNPHKMPWLESENVKLDKWGRIVASVETTVPYQTSNKKIFAGGDAVRGADLVVTAIAE GRHAADGIMQYLHVPVQRPTITPENAA >gi|316919999|gb|ADCU01000004.1| GENE 6 5366 - 8899 2917 1177 aa, chain - ## HITS:1 COG:YPO2334_1 KEGG:ns NR:ns ## COG: YPO2334_1 COG0674 # Protein_GI_number: 16122558 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Yersinia pestis # 1 406 1 406 406 738 85.0 0 MITTDGNNAVASVAFRASEVIAIYPITPSSTMAEQADSWSGDGRRNIWGDIPRVVEMQSE GGAIATVHGALQTGALATSFTSSQGLLLMIPNLYKLAGQLTPFVLHVAARTVATHALSIF GDHSDVMAVRQTGCAMLCANSVQEAQDFALIAHMATLNSRVPFIHFFDGFRTSHEINKIV PLSDDTLRTLLPQSAIDAHRARALTPDHPVIRGTSANPDTYFQSREATNPYYDATYQHVA DAMQAFGDVTGRHYQPFEYYGHPEAERVVILMGSAIGTCEEVVDTLLSRNEKVGVLKVRL FRPFSAQQLLKVLPDSAMRIAVLDRTKEPGALAEPLYLDVMTALAESFSRGERNTLPRVI GGRYGLSSKEFGPDCALAVFNELKLENPRPRFTVGIFDDVTGLSLPLSDELLPQRTRLEA LFYGLGSDGTVSATKNNIKIIGNSTPLFAQGYFVYDSKKAGGLTVSHLRVSDNPINSAYL INQADFIGCHQWQFIEKYQMVEHLKTGGIFLINTPYSADEIWHNLPRDVQALLHQRQAQV YIINAAKIARECKLGARINTVMQMAFFHLTGVLPSDDALKLLQDAITRSYSSKGNEIVER NWQALAASRAALTEIPLQPIDDTSSLRPPVVSDDAPDFVKTVTAAMLAGLGDALPVSAFP PDGTWPTGTTRWEKRNIAEEIPIWEAPLCTQCNHCVAACPHSAIRAKVVMPEAMEHAPDS LHSLDVKARDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMKSRLDHLAEE KENFDFFLDLPEIDRSKIERIDIRTSQLISPLFEYSGACSGCGETPYIKLLTQLYGDRLL IANATGCSSIYGGNLPTTPYTTNADGRGPAWANSLFEDNAEFGLGFRLTIDQHRQRVNRL LDSLAEQLPQELLNELRQPDRPIEERRIQVEKLRVELQNIDSDDARQLITDADYLVDKSV WLIGGDGWAYDIGFGGLDHVLSLTENINVLVLDTQCYSNTGGQQSKATPLGAVTKFGEHG KRKARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYD LAYSHEQMKQLTATGFWPLYRFDPRRSDEGKLPLALDSRPPSIDLADTLLKEQRFRRLNT QEPEVAQQLYRDATADLKKRFEFLSLLAGKPLSDDTE >gi|316919999|gb|ADCU01000004.1| GENE 7 9209 - 9865 363 218 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 [Bacillus selenitireducens MLS10] # 5 217 14 234 236 144 34 9e-34 MITDLLLRVVLAGFLGGLIGIERQLRAKEAGLRTHVLVGIGSAMFMIVSKYGFNDILMES HVGLDPSRIAAQVVSGMGFLGAGTIMIQKQVVRGLTTAAGLWVTAAIGLVIGSGMYEIGI YGTLMTLIVLEVFRQLSNRLIGHHHSVIIQLLPASVSGILLALQQMRLKPGYLTVNQHDN DTELCEMSLELTLRPKQDISDVYQKLQQVNGVHFIDIR >gi|316919999|gb|ADCU01000004.1| GENE 8 10150 - 10413 316 87 aa, chain + ## HITS:1 COG:YPO2331 KEGG:ns NR:ns ## COG: YPO2331 COG3042 # Protein_GI_number: 16122555 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Yersinia pestis # 6 85 6 111 113 68 47.0 3e-12 MIAKLGLVLAAGILLSACSSEPEQQATSANVHQRIDMSDAAVENCALAGGTLALSSQLDG SSVGMCQLPDGKRCGESALVRGACPAN >gi|316919999|gb|ADCU01000004.1| GENE 9 10491 - 10919 204 142 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163801140|ref|ZP_02195040.1| 50S ribosomal protein L25 [Vibrio campbellii AND4] # 1 142 3 146 147 83 32 2e-15 MKFKAVSLALSTVLLAACTTQAPQTLQQSDLLHRHFVLQSVDGKTIGGDKNRMEPGIEFG EKMHVSGAMCNRFMGQGELQNNILKVEHLASTRMACIDPARAALDPIITDVLSQGAEVSL IKGQLTLKNANHTLVYQQKDWM >gi|316919999|gb|ADCU01000004.1| GENE 10 11128 - 11673 253 181 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227998593|ref|ZP_04045604.1| acetyltransferase, ribosomal protein N-acetylase [Kangiella koreensis DSM 16069] # 2 163 8 166 184 102 36 5e-21 MVLDTPVLMTERLILRAHRLDDFADLCAMWADPEIVKFIGGEPQTPEQVWQRLLRYTGNW ALFDYGYWAVFDKSTQQYIGNIGLAENHRDIEPRLRYPEMGWTFNPAFHGKGYAVEAAKC VLAWADEILKTPVCCIIDQDNVRSIHLAEKCGFLLRKETGYHGNMIYIMERQNAIVDTKL L >gi|316919999|gb|ADCU01000004.1| GENE 11 11776 - 11997 216 73 aa, chain + ## HITS:1 COG:no KEGG:Spro_3094 NR:ns ## KEGG: Spro_3094 # Name: not_defined # Def: glycogen synthesis protein # Organism: S.proteamaculans # Pathway: not_defined # 9 73 2 66 70 65 58.0 6e-10 MVKTTASRVSTSDGSHFGEGSMDFLASSIALMESQGREVDASKVCGNMSVKQRELFNQRL THYRQALLADQTV >gi|316919999|gb|ADCU01000004.1| GENE 12 12099 - 13091 951 330 aa, chain - ## HITS:1 COG:YPO2329 KEGG:ns NR:ns ## COG: YPO2329 COG1052 # Protein_GI_number: 16122553 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Yersinia pestis # 1 329 1 329 330 590 85.0 1e-169 MKLAIYSTKQYDRKYLELVNKEFGFELEFFDFLLSAKTAKVAQGCEAVCIFVNDDASREV LTELAALGVKIIALRCAGFNNVDLVAAKELGLQVVRVPAYSPEAVAEHAVGLMMSLNRRI HRAYQRTRDANFSLEGLIGFNMHNRTAGVIGTGKIGVATMRILKGFGMKLLAYDPYPNPQ ALELGAEYVDLKTLYEKSDVITLHCPLTPENHHLLDANAFSQMKSGVMIINTSRGGLIDS DAAIEALKQQKIGSLGMDVYENERDLFFEDKSNDVIQDDVFRRLSACHNVLFTGHQAFLT EEALTSISETTLGNIRALANGEHCDNLLTA >gi|316919999|gb|ADCU01000004.1| GENE 13 13338 - 15956 1883 872 aa, chain + ## HITS:1 COG:no KEGG:Spro_2599 NR:ns ## KEGG: Spro_2599 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 867 1 867 870 1044 58.0 0 MIKWLKRLFAALIAILLALTFLWLTVAHWLPSVIQHWLPTGTTVRFSERPFWSNGALHLP GLSYQAGDCRLGDLSQARLRYHQGRWQMLAETLDVNTQCLEKLPSSDSPSAPLELDKIQQ SLPLFDIAVNHLIVSPWQDYAGAISVANNVDGQTIRYRSDRLSVDARLDDKQKLTLKKLS LKVPQSDQPLELDGELQIPLDLASLPRSGAMQAQLKTPFIDAPLQVISSWKNKQGNLTII AKGDKTPLANLPWTVSRHEIHINKGQWRWPYAQQPLQGGIDVTLTDWDKNYQQTQIEARM NVLTQGAHGKGNVVVNLGPGKLSVIDSSMAFRVTGLVNSQNLSLTASIPGQLTGSVLNPL LTLDSGSLLRAWGKLDAQTTLQEIRWPLAGIKLNAEGVTGRLQAIMRVKDSYWGSFKLHL DGQAAQFLPDQGRWQWQYWGNGDLPPLAAKWDVGGRGEWIGNAIRLTQLSTGFDKIHYGM MTVMKPRLSIGQPVEWVRDEQQPKFNGAFILDTRKVEFENGGYLPHAVLNLAAQGFAPDH FLLKGDLHAERIGPIKLNGRWDGERLRGEAWWAKQPTAVFQPLLSPDLNITLRDGDFYAQ AAFSAARAQGFEAGGHMVVKNAGMWLKDGEMSGLDFVMAYRLKNEIWQLGAKQPISLRIK HLSNLFEMSNISADLQGYYPYSDSSPLVLSNVGVDMLKGHIGFDALRLPEPASTVLRLKD IDLSVLFTALKPKQFAMSGRVDGELPLYLKDKQWLIRNGWINNSSMLTLRLDPDMADAMA ENNLAAGAAIEWLRYMEISRSRADVNLSNLGVLTMAATIRGVNPQQNAHREVVLNYHHEE NIFELWRSLRFGDNLQEWLEQSLSTPARSEHE >gi|316919999|gb|ADCU01000004.1| GENE 14 15949 - 16143 181 64 aa, chain + ## HITS:1 COG:no KEGG:Spro_2598 NR:ns ## KEGG: Spro_2598 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 8 64 9 65 65 88 82.0 9e-17 MSNLKVWLLATIVCVPLTGCVPRIEVAAPKDPITINMNVKIEHEIHIKVDKDVENLLKTQ SGLF >gi|316919999|gb|ADCU01000004.1| GENE 15 16154 - 16480 351 108 aa, chain + ## HITS:1 COG:YPO2326 KEGG:ns NR:ns ## COG: YPO2326 COG3784 # Protein_GI_number: 16122550 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 2 107 12 123 123 137 69.0 7e-33 MRKSLIALLGAGLLFSSAVFALTLDQAKQQGRVGETLSGYIVALKQDKETLALVEQINTG RAEKYQEVANNNHISREDVAKMAGQKLVERAASGEYVRGINGQWLRKP >gi|316919999|gb|ADCU01000004.1| GENE 16 16609 - 17214 791 201 aa, chain - ## HITS:1 COG:acpD KEGG:ns NR:ns ## COG: acpD COG1182 # Protein_GI_number: 16129373 # Func_class: I Lipid transport and metabolism # Function: Acyl carrier protein phosphodiesterase # Organism: Escherichia coli K12 # 1 201 1 201 201 322 81.0 3e-88 MSKVLVLKSSILANYSQSNVLADYFVEQWRQQHNDDQIQVRDLAADPIPVLDGELVGALR PSDAPLTPRQQDALDLSNTLIEELKASDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFR YTEAGPEGLLKGKKVYVLTSRGGIHKDTDTDLVTPYLRVFLGFIGLTDVEFVFEEGIAYG PDMATKAQQDAKALISQLATA >gi|316919999|gb|ADCU01000004.1| GENE 17 17566 - 21453 3597 1295 aa, chain + ## HITS:1 COG:STM1641 KEGG:ns NR:ns ## COG: STM1641 COG1643 # Protein_GI_number: 16764985 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Salmonella typhimurium LT2 # 2 1295 6 1300 1300 2127 81.0 0 MTSPLSAIASQLDELMLRDKQRLMRRIQGAKKVKKAESQQAIADTLAVDLASALQRVESR RAACPKITYPENLPVSQKKDEILAAIRDHQVVIVAGETGSGKTTQLPKICLELGRGVKGL IGHTQPRRLAARSVGDRIAHELDTTLGGAVGYKVRFNDQVSDNTLVKLMTDGILLAEIQQ DRMLMQYDTLIIDEAHERSLNIDFILGYLRQLLPKRPDLKVIITSATIDPQRFSRHFNNA PIIEVSGRTYPVEVRYRPVVDDADDVDRDQLQAIFDAVDELGREGPGDILIFMSGEREIR DTADALTKLNLPHTEILPLYARLSASEQNRVFQSHHGRRIVLATNVAETSLTVPGIKYVI DPGTARISRYSFRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEQDFLSRPEFT DPEILRTNLASVILQMTSLGLGDIAAFPFVEAPDKRNILDGVRLLEELGAVSTSEQGHQQ LTPLGRQLAQLPIDPRLARMVLEAQKHGAVREVMIITSGLSIQDPRERPSEKKQASDEKH RRFADKESDFLSLVNLWDYLKEQQKELSSNQFRRQCKTDYLNYLRVREWQDIYTQLRQVV KELRIPINSVPGDFRGIHCSLLSGLLSHVGQKDTEKQEYTGARNARFAIFPGSALFKKPP KWTMVAELVETSRLWGRIAARIDPEWIEPLAQHLIKKSYSEPHWEKAQGAVMATEKVTLY GLPIVAARKVNYGSIDPQVSRELFIRHALVEGDWQTRHAFFRANQRLRSEVEELEHKSRR RDILVDDEALFSFYDQRIGHDVVSARHFDSWWKKASRNDPELLNFEKSMLIKDGAQGVSA LDYPNFWHQGAFKLRLSYQFEPGTDADGVTVHIPLAILNQIEESGFDWQIPGIRRELVIA LIKSLPKPIRRNFVPAPNYAEAFLGRATPLEMPLLESMERELRRMTGVTVSREEWQLDQV PDHLRMTFRVIDDKKKTLAEGKSLEALKTQLKGQVQQTLSEVADDGIEQQGLHVWSFGSL PQSYEQKRGGYSMKAFPALVDEKDSVAIRLFETEQEQQQAMWQGSRRLLLLNIPSPIKYL HEKLPNKAKLGLYFNPYGKVLDLIDDCIACGIDSLIAKHGGPAWSEEGFTQLHEQVRAEL NDEVVSIARQVEQILTTANGINKRLKGRVDMSLALALSDIKNQVGNLIYRGFVTATGASR LPDVERYLHAIERRLEKVATDPHRDRAQMLKVEQVQQAWKQMLNKLPAQRAGEPEIKEIR WMIEELRVSYFAQQLGTPYPISEKRIMQAIDQILA >gi|316919999|gb|ADCU01000004.1| GENE 18 21431 - 22303 484 290 aa, chain - ## HITS:1 COG:YPO2319 KEGG:ns NR:ns ## COG: YPO2319 COG3591 # Protein_GI_number: 16122543 # Func_class: E Amino acid transport and metabolism # Function: V8-like Glu-specific endopeptidase # Organism: Yersinia pestis # 43 284 33 274 278 314 64.0 1e-85 MTAIGFRSMQLLRSITLCVPVFYCAINTLPAKADDEILTPTQQLQLFYGKDDRIKITNVT QSPWNAIGQIETESGNLCTATLITSRLVLTAGHCLLTPPGKIDPAIALRFSSHNQKWRYE ITQLRTLVDPKLGKRLKADGDGWIVPSSAAPQDYGLVEIESDRLPPIEPLPLWQGNSKQL TAELKANKRLVTQAGYPQDHLDDLYSHENCLVMGWAQTGVLSHQCDTLPGDSGSPLLMTT DNGWRLIAIQSSAPAAENRALADNRAVAVTAFSDGLKRLVQQNAKPKSDQ >gi|316919999|gb|ADCU01000004.1| GENE 19 22760 - 23530 695 256 aa, chain + ## HITS:1 COG:ECs0206 KEGG:ns NR:ns ## COG: ECs0206 COG0500 # Protein_GI_number: 15829460 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 5 256 4 255 256 303 62.0 3e-82 MTNKQSHHRAVDRQFADQANAYLGSAVHAQGNDLQRLARLLEGDDFDSVLDLGCGAGHAS FAVAAQVREVVAYDLSDKMLDVVQHAARDRDIDNLVVQQGVAESLPFDDESFDVVISRYS AHHWYDVGKALREVKRVLKQGGRAIFMDVVSPGHPVLDVHLQTIEILRDTSHVRDYTPGE WLSFFTEAGLRVQTVTSDRLHLEFSSWIARMRTPESLVTAIRVVQESASEEVKLHFEVQP DGSFTSDIMMFEIVKS >gi|316919999|gb|ADCU01000004.1| GENE 20 23963 - 24598 246 211 aa, chain + ## HITS:1 COG:no KEGG:Coch_0288 NR:ns ## KEGG: Coch_0288 # Name: not_defined # Def: hypothetical protein # Organism: C.ochracea # Pathway: not_defined # 4 203 5 217 224 130 38.0 4e-29 MSALLKQLHAMSINKVQPPDELLALYNWIEENGFIEEYNDGFLYGRISHDWEYTPDITFT ASYQESIHHWFDLPTVTEEIASRLVIFASSGMDGSMLGLWLDDDKQVRFVHLGSGSGSML CCIIADNARDFLSLLAIGYAEVGDVYDFSLPPAELGDKPKLNTLFLDWLKREFYITRPRN ASLIVKRPAEIGSKIAKDPFCQWCNKQFKNT >gi|316919999|gb|ADCU01000004.1| GENE 21 24602 - 24751 83 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGGLFDLFIQESAARALIEGEAFFILHIFDLLLVTSGVAIDRYSSFSR >gi|316919999|gb|ADCU01000004.1| GENE 22 24748 - 25914 654 388 aa, chain - ## HITS:1 COG:ybeQ KEGG:ns NR:ns ## COG: ybeQ COG0790 # Protein_GI_number: 16128627 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli K12 # 93 341 17 268 327 72 28.0 2e-12 MAIAKVSLNNLLLIAILASSSVNAASQDIKALQIKAGQGDIQASLELGKHFENAEGVEQN LGEALTYYRRAVLLGHSEEGSQRLTALRHRYGEIEKKAKSGDPKSEYDFGTILSADPDYE NYYPRRSEPKAKDWFERAAEQGYRPAQRSLASIYAQMPLKNLEKSLYWFSIWAKSGDASS QLEVADILKEYPFMLMKNQLELRKEWLTLAANNGSAEAMLELGYFIRDNEGNDDAALSWY MKSANKGYARGQLAVGLSLIHKHDIQQAVKWLELAASNGNMSAQTALGQIYEEMEPLNQK RALFWYQKAAAQGDTYAAYRTGYYLHNGITVAKDNITAWSWCSLGIDATPDSRDERDAIE KELSASDLQKAKEIYAKEKAFYIAVNGN >gi|316919999|gb|ADCU01000004.1| GENE 23 26012 - 27499 1295 495 aa, chain - ## HITS:1 COG:YPO2310 KEGG:ns NR:ns ## COG: YPO2310 COG2317 # Protein_GI_number: 16122534 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent carboxypeptidase # Organism: Yersinia pestis # 1 493 1 499 499 686 66.0 0 MTTAYDQLRDTFTRLSRLSHLSAITGWDMQTQMPSGGSHARAEALSELSVLMHQTLTAPQ IADWIEQAKNESLDTDQQANLHEIARRYQQAVILPDQFVSAKSLAGMKCEHAWRTQRPDN DWSGFVKNFAPVVELSREEAQIRAEATNVSRYDALLDLYEPGMTSARLDAIFADVKSWLP ELLKNIIEKQSAEKTLSAQGPFAIEKQRALGLDIMQVLGFDFNHGRLDVSAHPFCGGVPE DVRITTRYTENDFLSALLGIVHETGHARYEQNLPKQWAGQPIGEARSTAIHESQSLLFEM QLARSEPFLTFLRPYVQKAFGDQPAFDPANFKRINQRVEAGYIRIDADEVSYPAHVILRY EIERALIEGDIDVQHIPALWDEKMRAYLGLSTKDNFRDGCMQDIHWTDGAFGYFPTYTLG AMYAAQLFASAKVALPDLNSQILRGDLSPLSDWLRQNIWQQGSRFDTDTLIKNASGETLN PSFFRRHLEQRYLDR >gi|316919999|gb|ADCU01000004.1| GENE 24 27550 - 28878 1100 442 aa, chain - ## HITS:1 COG:YPO2309 KEGG:ns NR:ns ## COG: YPO2309 COG0642 # Protein_GI_number: 16122533 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 10 422 1 413 425 664 82.0 0 MRKLFVQFYLLLFVCFLVMAMLVGLVYKVTAERAGRQSMDDLMKSSLYLIRSELREIPPR DWNKTINKLDWNLSFKFHIEPLGKRQLAPELEKKLRNGEIVALDSEYSFIQRIPRSHYVL AVGPIPYLFYLHEMRLLDLALLLFIGLSLALPVFLWMRPHWQDLLQLENAAQRLGEGHLE ERTHFDATSSLHRLGVAFNQMADNINTLIVSKKQLIDGIAHELRTPLVRLRYRLAMSDNL SESEQTALNRDIGQLEGLIDELLTYARLDRPQVETHLEAIDLPKWLAERIADIQMIHPEH EITLDVPHEGDFGAVDLRLMERVLDNLVNNALRYSEKKLRVGLWFDGNNACLQVEDDGPG IPPEERERIFEPFVRLDPSRDRATGGCGLGLAIVCSIAQAYQGTISASGSSLGGASLLFS WPRRQTNTPPTIGAQAEQSHTH >gi|316919999|gb|ADCU01000004.1| GENE 25 28885 - 29598 546 237 aa, chain - ## HITS:1 COG:YPO2308 KEGG:ns NR:ns ## COG: YPO2308 COG0745 # Protein_GI_number: 16122532 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Yersinia pestis # 1 237 1 245 248 347 79.0 1e-95 MNNIVFVEDDPEVGQLIAAYLGKHDLDVTIEPRGDTAMETIVRLNPDLVLLDIMLPGKDG MTLCRDLRPVYKGPIVLLTSLDSDMNHILSLEMGANDYILKTTPPAVLLARLRLHLRQHQ TLTSETETLPTNTRNGIHFGQLRIDPVNRQVTLKDKNISLSTSDFDLLWELATHAGTIMD RDALLLTLRGVSYDGMDRSIDVAISRLRRKLDDSATEPFRIKTVRNKGYLFAPNAWE >gi|316919999|gb|ADCU01000004.1| GENE 26 29689 - 30411 672 240 aa, chain - ## HITS:1 COG:ECs2312 KEGG:ns NR:ns ## COG: ECs2312 COG1028 # Protein_GI_number: 15831566 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 8 240 8 240 240 302 64.0 3e-82 MTNAYNAPILITGGARRIGLALAHALLAQGTPVIVAYRSEYPALDGLRQAGAICIQGDFT QTQEIYQFAEQIKSCTPKLRAVIHNASAWLAETAEIAPEDTLAKMLQIHVYTPYLLNQLL EPLLVGQGEAGSDIIHITDYVVERGSAKHIAYAASKAALDNMTRSFAAKLAPEVKVNAIA PALIMFNSLDGEDYRQKALDKSLMKIAPGEQEIVNTIEFLLNSRFVTGRTISVDGGRPLR >gi|316919999|gb|ADCU01000004.1| GENE 27 31091 - 31510 311 139 aa, chain + ## HITS:1 COG:no KEGG:Spro_2588 NR:ns ## KEGG: Spro_2588 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 135 1 136 138 142 52.0 3e-33 MSGNHSTVEDRKALCFDYTRFLSASCNKHWGFIDAIYGVMPLFGMVTRSQSKSIENLNAQ IRQLAMQVLSTQVSDETNIVRLIELVKNQGLQELDIQLPYALEDEQLMTIQAECRNAVSM TQYDERLHVVITVKEPKRK >gi|316919999|gb|ADCU01000004.1| GENE 28 31599 - 32939 1097 446 aa, chain - ## HITS:1 COG:YPO2306 KEGG:ns NR:ns ## COG: YPO2306 COG0531 # Protein_GI_number: 16122530 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Yersinia pestis # 1 444 18 461 463 603 78.0 1e-172 MLGAGVFSLPQNMAAVASPAALLIGWTITGVGILFLAFAMLLLTRLRPDLDGGIFTYAKE GFGELIGFCSAWGYWLCAVIANVSYLVIVFAALSFFTDSAGHTVFGDGNTWQAIVGESIL LWVVHFLILRGVKTAAGINLAATLAKLLPLGLFVILAALAFKIDTFKLDFTGVKLGVPVW EQVKDTMLFTLWVFIGVEGAVVVSARAKHKKDVGLATMLAVISALVVYLLITLLSLGVMP RAELAEIRNPSMAGLMVNMMGPMGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLASQHGAF PKIFGKQNSKEAPASSLWLTNGAVQITLIIIWLTGANYNNLLTIASEMILVPYFLVGAFL LKVARQKQDKRIIFAAYGACAYGLWLIYASGITHLLMSVMLYAPGLLVFMFARRGLEGKK DLCGMERMGIFLLLLATFPAAWFMFG >gi|316919999|gb|ADCU01000004.1| GENE 29 33269 - 34219 890 316 aa, chain - ## HITS:1 COG:no KEGG:Spro_2586 NR:ns ## KEGG: Spro_2586 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 316 1 316 316 444 83.0 1e-123 MKLKTTIIASALLSLTALSAQAAQELTPEKASELKPFDRVTISGRFNAINDAASAISRRA DSMGADYFYIQDINNSNNGGNWRVTADVYKKDAETVKDTTQYRVFNGVKELPKAEAYALQ PYDTVTVSGFFRSQPDATDAISRAAKKKGADSYFIIRQIDANSGGNQYITAYIYKADAPK RQVQSPDAIPADSEAGKAALAAGGAAAANVEIPGVASSGTPSAGIGRFFETQSSTGKRYT VTLPDGTEIQEVNNTTAAQMVPFDSVTFTGHFNSMTDVSTEVAKRAAKKGAKYYHITRQW QNKSGGNLTVSADLFK >gi|316919999|gb|ADCU01000004.1| GENE 30 34846 - 36375 1400 509 aa, chain + ## HITS:1 COG:ECs2309 KEGG:ns NR:ns ## COG: ECs2309 COG3288 # Protein_GI_number: 15831563 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Escherichia coli O157:H7 # 1 509 1 510 510 832 84.0 0 MRIGIPRERLANEARVAATPKTVEQLLKLGFTVAIENGAGKLASFDDTAFQQAGAEIVGY EDVWQSDVILKVNAPEDEEIALMNPGSTLISFIWPAQNQELLQKLAERQVTVMAMDSVPR ISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAA IGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSPAFIKAEME LFAAQAKDVDIIVTTALIPGKPAPRLITKEMVESMKPGSVIVDLAAQTGGNCELTVADTV TETPNGVKIIGYTDLPSRLPTQSSQLYATNLVNLLKLLCKEKDGTLNVDFDDTVIRGVTV VKTGEITWPAPPIQVSAQPKAKAAEPVAAKEPEKPASPYRKYVILAVAIILFGWLANVAP KEFLSHFTVFALSCVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGAVLQIGHGGWITFF AFIAVLIASINIFGGFTVTQRMLKMFRKN >gi|316919999|gb|ADCU01000004.1| GENE 31 36386 - 37777 1344 463 aa, chain + ## HITS:1 COG:YPO2302 KEGG:ns NR:ns ## COG: YPO2302 COG1282 # Protein_GI_number: 16122526 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Yersinia pestis # 1 463 1 462 464 748 88.0 0 MSGGLVTAAYIVAAILFIFSLAGLSKHETSKQGNIFGVVGMAIALIATIFGPDSSNVGWI IVAMVIGGAIGVYLAKKVEMTEMPELVAVLHSFVGLAAVLVGFNSFIEHQPGSMEHVMEN IHLTEVFLGIFIGAVTFTGSIVAFGKLRGTISSKPLMLPNRHKLNLAALVVSFLLMVWFV NTGSTSVQVMCVLLMTIIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSND LLIVTGALVGSSGAILSYIMCKAMNRSFFSVIAGGFGTDGSSTGEDQEMGEYRETTAEEV AEQLKGSSSVIITPGYGMAVAQAQYPVAEITAKLRAMGVKVRFGIHPVAGRLPGHMNVLL AEAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAMEDPRSPIAGMPVLEVWKAQN VIVFKRSMNTGYAGVQNPLFFKENTQMLFGDAKASVEAILRAL >gi|316919999|gb|ADCU01000004.1| GENE 32 37827 - 39110 634 427 aa, chain - ## HITS:1 COG:ynfM KEGG:ns NR:ns ## COG: ynfM COG0477 # Protein_GI_number: 16129554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 33 420 26 413 417 537 76.0 1e-152 MDTPSAESIQPQSGSASTPSAAPTRRTLNKLPFIERGQPQFIRVTLALFSAGLATFALLY CVQPILPVLSHDFGISPASSSLSLSVSTGLLAVGLMFTGPLSDAIGRKQVMVASLLLAAI CTLICSMMTSWHGILIMRAMVGLSLSGVAAVAMTYLSEEIDPAVVAFSMGLYISGNSIGG MSGRLVSGVLTDFFSWRIALAIIGLFALAAAFMFWKILPASKHFRATSLRPRTLLINFRL HWHDRGLPLLFAEGFLLMGSFVTLFNYIGYRLLGTPYSLSQAFVGLLSVVYLTGSYSSPK AGALTSKFGRGPVLTVSISIMLIGLLITLFAPLVAIFIGMMLFTAGFFAAHSVASSWIGR RARRAKGQASSLYLFCYYAGSSVAGTLGGVFWNQYGWNGIVIFLGVMLLLAIWISRSLKR LPEASRI >gi|316919999|gb|ADCU01000004.1| GENE 33 39280 - 40185 191 301 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 3 247 1 239 305 78 26 8e-14 MRIEIRHLKYFIAVAEECHFGRAAERLNISQPPLSQQIQYLEQEVGARLLARTNRSVSLT QAGELFLKECYEIVNHLSQAAETAARAHRGELGSLKIGFTSSAPFISQVASSLFSFRQRY PLVHMQMREVNTKQQIEPLLEGKLDLGVMRNTRLPDMLAHQLLLREPLVAVLHKNHPLAA GEHKPLKFSDLAQQPFVFFSREVGTALYDEILTLLLNAGITPYITQEVGEAMTIVGLVSA GLGVSILPASFTRIQVDGVCYRPLDEDNAFTEVWLVYNKNRALTAQATALIALMLSQQQI K >gi|316919999|gb|ADCU01000004.1| GENE 34 40326 - 41546 228 406 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 137 390 51 317 319 92 26 4e-18 MIAESQPGHIDQIKQINAGAVYRLIDQHGQISRIELSKRAQLAPASITKIVRELLEAHLV QETEFQDLGSRGRPAVGLILDTVAWHYLCVRVGHGVMTLALRDLSSKLVAEDDIDLPAQA EQPLLERIINEIDQFFIRHQNKLERLTAIAITLPGLINSAKGMVHRMPFYADVCDMPLGP ELEQHTGLPVFLQHDICAWTMAESLFGAGEGCGNMLQVVIDHDVGAGVITDGRLLNGGRH SVVEIGHTQVDPYGKQCYCGNHGCLETVAGLDHILDLAQQRLPLSPSSLLHNGPITIDAI CQAAMQGDQLSKDIISSVGNNVGRILAIMVNLFNPDKILIGSPLNQASAILFPSINAAIQ QQSLPYYAHGLNVEATHFRNNGTMPAAALVKEALYNGSLLVQLLQG >gi|316919999|gb|ADCU01000004.1| GENE 35 41775 - 42440 756 221 aa, chain + ## HITS:1 COG:YPO2269 KEGG:ns NR:ns ## COG: YPO2269 COG0132 # Protein_GI_number: 16122492 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Yersinia pestis # 1 220 1 220 222 297 66.0 1e-80 MLKRVFVTGTDTEVGKTVVSRALLQSIHASGATALGYKPIAVGSEETPQGLRNKDALTLQ ASSSIPLTYDEVNPITLQEEIANAYTGEALDYSLMSRGLQNLSSKAEHLVVEGTGGWRVL MQDLRPLSEWVVQEQLPVILVVGIKLGCISHAILTAQAIINDGLPFAGWIANRINPGLSH YAETLEALRQKLPGPQLGEIPYLFRPEEKDLSKYIDLSPLK >gi|316919999|gb|ADCU01000004.1| GENE 36 42451 - 42918 274 155 aa, chain - ## HITS:1 COG:YPO2270 KEGG:ns NR:ns ## COG: YPO2270 COG0038 # Protein_GI_number: 16122493 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Yersinia pestis # 1 154 276 429 431 207 80.0 5e-54 MQLALGGLIVGGLSILFPEVWGNGYSVVQSLLTAPPGVLLIAAILICKLVAILASSGSGA PGGVFTPTLFIGAALGTLVGQVCAIWPEMGQHITLLMALTGMATLLAATTHAPVMSALMV FEMTGEYTLLPGLLLSCVLATTLSRWLRAGSVYRK >gi|316919999|gb|ADCU01000004.1| GENE 37 42980 - 43381 188 133 aa, chain - ## HITS:1 COG:YPO0963 KEGG:ns NR:ns ## COG: YPO0963 COG1662 # Protein_GI_number: 16121266 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Yersinia pestis # 16 133 1 117 118 171 78.0 3e-43 MKIQLICEVDEMWSFVGNKKRQRWLWYAWEPRLKRIIAHVFGSRSKKTLCKLLKLLSGFS VAFWCTDGYRAYNEKLPKAKHIVGKLYTQRIERENLTLRNRLKRLNRKTLGYSKLAEMHD RIIGTFIEREHYV Prediction of potential genes in microbial genomes Time: Wed May 18 14:52:57 2011 Seq name: gi|316919989|gb|ADCU01000005.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.5, whole genome shotgun sequence Length of sequence - 6079 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 4, operones - 2 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 7/0.000 - CDS 26 - 394 139 ## COG1662 Transposase and inactivated derivatives, IS1 family 2 1 Op 2 . - CDS 448 - 723 138 ## COG3677 Transposase and inactivated derivatives 3 1 Op 3 . - CDS 716 - 1768 328 ## COG4644 Transposase and inactivated derivatives, TnpA family - Prom 1901 - 1960 4.4 + Prom 1735 - 1794 5.2 4 2 Tu 1 . + CDS 1999 - 2571 236 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Term 2485 - 2530 -0.3 5 3 Op 1 1/0.500 - CDS 2599 - 3435 195 ## COG0627 Predicted esterase 6 3 Op 2 . - CDS 3499 - 3897 368 ## COG0346 Lactoylglutathione lyase and related lyases 7 3 Op 3 2/0.000 - CDS 3939 - 5048 922 ## COG1062 Zn-dependent alcohol dehydrogenases, class III 8 3 Op 4 . - CDS 5079 - 5354 297 ## COG1937 Uncharacterized protein conserved in bacteria - Prom 5377 - 5436 10.2 9 4 Tu 1 . - CDS 5888 - 6079 136 ## COG1662 Transposase and inactivated derivatives, IS1 family Predicted protein(s) >gi|316919989|gb|ADCU01000005.1| GENE 1 26 - 394 139 122 aa, chain - ## HITS:1 COG:YPO0963 KEGG:ns NR:ns ## COG: YPO0963 COG1662 # Protein_GI_number: 16121266 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Yersinia pestis # 5 122 1 117 118 169 78.0 2e-42 MWSFVGNKKRQRWLWYAWEPRLKRIIAHVFGSRSKKTLCKLLKLLSGFSVAFWCTDGYRA YNEKLPKAKHIVGKLYTQRIERENLTLRNRLKRLNRKTLGYSKLAEMHDRIIGTFIEREH YV >gi|316919989|gb|ADCU01000005.1| GENE 2 448 - 723 138 91 aa, chain - ## HITS:1 COG:YPO0964 KEGG:ns NR:ns ## COG: YPO0964 COG3677 # Protein_GI_number: 16121267 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 87 1 87 91 148 85.0 2e-36 MAKVDVRCPFCEQTDPVKKHGHGKSGHQRYRCQTCKRTFQLDYAYRACQPGMKEQIVDLA MNNAGIRDTARALHISINAVVRTLKNSHPGM >gi|316919989|gb|ADCU01000005.1| GENE 3 716 - 1768 328 350 aa, chain - ## HITS:1 COG:CAP0094 KEGG:ns NR:ns ## COG: CAP0094 COG4644 # Protein_GI_number: 15004798 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, TnpA family # Organism: Clostridium acetobutylicum # 1 310 1 313 314 123 29.0 5e-28 MARRQILSLSERESLLALPDEELTLTRMAYFSEHDLALISAHRKPASRFGFAVLLCYLKN VGFTPDKKIPPSDALLKHIASRLKLTGDLWPAYLSGRETTRREHLTELYRYLGLKAFTGK IQQDCITHLLPMATRTDKGILLAEELLVWLRQNNVIIPSIDVVERSCAEAMAGGDKIVFQ TLNAPLTPAHRDALDCLLESSDNQSSRLTWLLQPPGKINGKNVLQHLDRLSSIESLALPE GIDRTIHQNRLLKLAREGRKMSSRDLTRFSAARRHAILVCVLEEARATLTDEVIELHERM LNSLFSKAKRTQAERLQQTGKLIQSKLKRSSIQYVDYGVRSLLLMRGYDG >gi|316919989|gb|ADCU01000005.1| GENE 4 1999 - 2571 236 190 aa, chain + ## HITS:1 COG:YPMT1.70 KEGG:ns NR:ns ## COG: YPMT1.70 COG1961 # Protein_GI_number: 16082862 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Yersinia pestis # 2 182 23 200 206 145 43.0 3e-35 MLEQFVQERGHKIASYYRENISGTKLDRPELGRLLMDSHRNDILLVEQIDRLTRLSNSDW MTLKKQIEQHELRIVSLDVPTSWQALSDKDPSQADPITRAVITAINNMLIDLMAAMSHKD WLSRRHRQKQGIERAHTLGKYRGKQADQERHKKVLYYRQVKKLSIRETAEATGYSTSQVC RIQALFRPEN >gi|316919989|gb|ADCU01000005.1| GENE 5 2599 - 3435 195 278 aa, chain - ## HITS:1 COG:yaiM KEGG:ns NR:ns ## COG: yaiM COG0627 # Protein_GI_number: 16128340 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli K12 # 1 276 1 276 277 462 78.0 1e-130 MELIEQHASAGGWQNVYRHNSQTLNCEMNFGVYLPPKAATEKLPVLYWLSGLTCTEQNFI TKSGMQHYAARNNIIVVVPDTSPRGEHVADADSYDLGQGAGFYLNATEHPWNTHYRMYDY ILHELPDVVMEHLPVTSRKSISGHSMGGLGALVLSLRNPDEYVSVSAFSPIVSPSQVPWG QQAFTAYLGENKKTWEHYDPVSLILQGAKLPEIFIDQGLSDAFYEDQLRTKSLERVCNEM NINTSFRYHTGYDHSYYFISSFIGEHIAYHANRLRLSA >gi|316919989|gb|ADCU01000005.1| GENE 6 3499 - 3897 368 132 aa, chain - ## HITS:1 COG:VCA0432 KEGG:ns NR:ns ## COG: VCA0432 COG0346 # Protein_GI_number: 15601195 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Vibrio cholerae # 8 128 13 136 144 94 49.0 4e-20 MATPVISGNDVFSHVFIGASDVEKSADFYDAVLGTLGINNLGPFGNGWVLYGREKPAFII ARPGNGEAPSANGVTVGFAAASPEEVDAFHAAGLAAGGKDEGQPGPRSHLPGAYAAYLRD PAGNKITAYTFI >gi|316919989|gb|ADCU01000005.1| GENE 7 3939 - 5048 922 369 aa, chain - ## HITS:1 COG:ECs0411 KEGG:ns NR:ns ## COG: ECs0411 COG1062 # Protein_GI_number: 15829665 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Escherichia coli O157:H7 # 1 369 1 369 369 697 94.0 0 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKNTHTGVCHTDAFTLSGNDPEGVFPVVL GHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCQSGKTNLCVSVRETQGKGLMPD GTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHN TAKVQPGDSVAIFGLGAIGLAAVQGARQAKAGRIIAIDTNPAKFELARQFGATDCINPND HDKPIKDVLLEINKWGIDHTFECIGNVNVMRAALESAHRGWGQSIVIGVAGAGQEISTRP FQLVTGRVWKGSAFGGVKGRTQLPAMVEDAMKGEIELEPFVTHTMTLDEINEAFDLMHEG KSIRTVIRY >gi|316919989|gb|ADCU01000005.1| GENE 8 5079 - 5354 297 91 aa, chain - ## HITS:1 COG:ECs0412 KEGG:ns NR:ns ## COG: ECs0412 COG1937 # Protein_GI_number: 15829666 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 91 8 98 98 143 90.0 8e-35 MPSTPEEKKKVLTRVRRIRGQIDALERALENGAECRSILQQIAAVRGAANGLMAEVLESH IRETFDQNDSYSHEISKSVDDTIELVRAYLK >gi|316919989|gb|ADCU01000005.1| GENE 9 5888 - 6079 136 63 aa, chain - ## HITS:1 COG:YPO0963 KEGG:ns NR:ns ## COG: YPO0963 COG1662 # Protein_GI_number: 16121266 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Yersinia pestis # 4 63 58 117 118 89 83.0 1e-18 AYNEKLPKAKHIVGKLYTQRIERENLTLRNRLKRLNRKTLGYSKLAEMHDRIIGTFIERE HYV Prediction of potential genes in microbial genomes Time: Wed May 18 14:53:24 2011 Seq name: gi|316919904|gb|ADCU01000006.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.6, whole genome shotgun sequence Length of sequence - 92269 bp Number of predicted genes - 86, with homology - 82 Number of transcription units - 56, operones - 21 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 116 - 156 -0.0 1 1 Op 1 . - CDS 331 - 606 137 ## COG3677 Transposase and inactivated derivatives 2 1 Op 2 . - CDS 599 - 1453 653 ## COG0038 Chloride channel protein EriC - Prom 1530 - 1589 4.4 - Term 1552 - 1589 7.1 3 2 Tu 1 . - CDS 1601 - 2989 1190 ## COG1858 Cytochrome c peroxidase - Prom 3157 - 3216 3.4 + Prom 3092 - 3151 5.9 4 3 Tu 1 . + CDS 3331 - 4821 948 ## COG0477 Permeases of the major facilitator superfamily + Term 4832 - 4860 0.6 - Term 4818 - 4848 1.0 5 4 Op 1 . - CDS 4875 - 5147 362 ## YPTB2193 hypothetical protein 6 4 Op 2 . - CDS 5191 - 5559 244 ## ETAE_1723 hypothetical protein - Prom 5601 - 5660 1.8 7 5 Tu 1 . - CDS 5764 - 6510 628 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity - Prom 6545 - 6604 2.8 + Prom 6490 - 6549 5.8 8 6 Op 1 . + CDS 6601 - 6825 166 ## 9 6 Op 2 . + CDS 6815 - 7777 770 ## COG3765 Chain length determinant protein + Term 7831 - 7882 -0.7 10 7 Tu 1 . - CDS 7903 - 8031 79 ## - Prom 8260 - 8319 4.7 + Prom 7918 - 7977 6.1 11 8 Tu 1 . + CDS 8003 - 8530 323 ## KPN_04628 acyltransferase domain-containing protein + Term 8566 - 8608 -0.5 - Term 8446 - 8487 1.1 12 9 Op 1 . - CDS 8687 - 9103 159 ## CKO_03729 hypothetical protein 13 9 Op 2 9/0.000 - CDS 9159 - 9923 228 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 14 9 Op 3 . - CDS 9941 - 11269 728 ## COG0477 Permeases of the major facilitator superfamily 15 9 Op 4 1/0.467 - CDS 11334 - 11903 184 ## COG3265 Gluconate kinase - Prom 11923 - 11982 3.0 - Term 11924 - 11959 1.3 16 10 Tu 1 . - CDS 12010 - 13056 416 ## COG1609 Transcriptional regulators - Prom 13106 - 13165 5.3 + Prom 13551 - 13610 5.5 17 11 Tu 1 . + CDS 13829 - 14332 10 ## Pcryo_1369 phage integrase + Prom 14334 - 14393 3.0 18 12 Tu 1 . + CDS 14446 - 14949 491 ## Pcryo_1366 hypothetical protein + Term 15013 - 15057 3.0 19 13 Tu 1 . - CDS 15399 - 15566 69 ## COG2801 Transposase and inactivated derivatives - Prom 15630 - 15689 3.8 20 14 Op 1 . - CDS 15717 - 19154 981 ## COG1204 Superfamily II helicase 21 14 Op 2 . - CDS 19234 - 20013 364 ## RPC_3052 hypothetical protein - Prom 20254 - 20313 6.0 - Term 20616 - 20659 7.2 22 15 Tu 1 . - CDS 20669 - 21118 227 ## SPAB_03413 hypothetical protein - Term 21429 - 21466 -0.6 23 16 Tu 1 . - CDS 21502 - 23151 532 ## SPAB_03414 hypothetical protein - Prom 23173 - 23232 4.9 24 17 Tu 1 . - CDS 23329 - 26451 714 ## Bphyt_6474 hypothetical protein 25 18 Op 1 . - CDS 26552 - 27985 276 ## KP1_0574 hypothetical protein 26 18 Op 2 . - CDS 28006 - 28365 194 ## Shewana3_1247 hypothetical protein 27 19 Tu 1 . - CDS 28814 - 29293 209 ## Csal_1992 hypothetical protein - Prom 29535 - 29594 9.9 28 20 Op 1 . - CDS 29898 - 30107 58 ## AOLE_03795 chloramphenicol acetyltransferase 29 20 Op 2 . - CDS 30140 - 30529 125 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 30769 - 30828 5.0 - Term 30789 - 30817 1.0 30 21 Op 1 1/0.467 - CDS 30833 - 32272 1125 ## COG0775 Nucleoside phosphorylase 31 21 Op 2 . - CDS 32368 - 32859 346 ## COG1846 Transcriptional regulators - Prom 32894 - 32953 5.9 + Prom 32916 - 32975 4.6 32 22 Tu 1 . + CDS 33132 - 33797 440 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 33 23 Tu 1 . + CDS 33917 - 34189 203 ## 34 24 Tu 1 . - CDS 34249 - 34863 637 ## COG0500 SAM-dependent methyltransferases - Prom 34971 - 35030 5.9 - Term 34995 - 35058 9.0 35 25 Tu 1 . - CDS 35072 - 36859 1319 ## COG0840 Methyl-accepting chemotaxis protein - Prom 36934 - 36993 7.8 + Prom 36923 - 36982 5.4 36 26 Op 1 . + CDS 37116 - 38303 1027 ## COG2814 Arabinose efflux permease 37 26 Op 2 . + CDS 38325 - 38792 425 ## COG0457 FOG: TPR repeat 38 27 Tu 1 . - CDS 39419 - 41422 1470 ## COG0826 Collagenase and related proteases - Prom 41453 - 41512 3.1 39 28 Op 1 7/0.000 + CDS 42044 - 42799 766 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Prom 42865 - 42924 2.9 40 28 Op 2 . + CDS 43006 - 43965 736 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 43989 - 44017 1.4 + Prom 44080 - 44139 5.5 41 29 Tu 1 . + CDS 44171 - 45103 606 ## ETAE_1709 DNA replication terminus site-binding protein + Term 45215 - 45255 -0.5 42 30 Tu 1 . - CDS 45125 - 46525 938 ## COG0114 Fumarase - Prom 46574 - 46633 6.8 + Prom 46641 - 46700 6.0 43 31 Tu 1 . + CDS 46724 - 47899 961 ## COG1482 Phosphomannose isomerase + Term 47961 - 47997 -1.0 + Prom 47982 - 48041 5.7 44 32 Tu 1 . + CDS 48113 - 49609 1451 ## COG5339 Uncharacterized protein conserved in bacteria 45 33 Op 1 . - CDS 49814 - 50845 742 ## COG1609 Transcriptional regulators - Prom 50865 - 50924 3.1 46 33 Op 2 . - CDS 50942 - 51073 59 ## - Prom 51100 - 51159 2.1 47 34 Op 1 3/0.267 + CDS 51193 - 52722 1475 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 52738 - 52770 6.1 48 34 Op 2 . + CDS 52810 - 53985 1022 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities + Term 53999 - 54035 6.2 + Prom 54051 - 54110 5.5 49 35 Op 1 9/0.000 + CDS 54221 - 54490 251 ## COG4453 Uncharacterized protein conserved in bacteria 50 35 Op 2 . + CDS 54494 - 55018 249 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 55109 - 55168 5.4 51 36 Tu 1 . + CDS 55200 - 56198 1142 ## COG1816 Adenosine deaminase 52 37 Tu 1 1/0.467 - CDS 56773 - 57771 831 ## COG0385 Predicted Na+-dependent transporter - Prom 57814 - 57873 6.3 - Term 57817 - 57866 4.4 53 38 Tu 1 . - CDS 57916 - 58959 987 ## COG0673 Predicted dehydrogenases and related proteins - Prom 58983 - 59042 5.4 - Term 59130 - 59176 7.9 54 39 Op 1 1/0.467 - CDS 59208 - 60248 613 ## COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component 55 39 Op 2 2/0.267 - CDS 60284 - 61237 668 ## COG2207 AraC-type DNA-binding domain-containing proteins 56 40 Op 1 21/0.000 - CDS 61402 - 62397 1039 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 57 40 Op 2 16/0.000 - CDS 62420 - 63940 1693 ## COG1129 ABC-type sugar transport system, ATPase component 58 40 Op 3 . - CDS 64038 - 65018 893 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 65246 - 65305 4.9 59 41 Op 1 7/0.000 + CDS 65425 - 67101 1388 ## COG1069 Ribulose kinase 60 41 Op 2 . + CDS 67127 - 68629 1538 ## COG2160 L-arabinose isomerase + Term 68876 - 68932 -0.8 61 42 Tu 1 . + CDS 68982 - 69197 154 ## Pecwa_2326 OriC-binding nucleoid-associated protein + Term 69224 - 69275 1.5 + Prom 69292 - 69351 5.7 62 43 Tu 1 . + CDS 69442 - 70329 769 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 70378 - 70437 2.7 63 44 Tu 1 . + CDS 70483 - 72219 1483 ## COG2759 Formyltetrahydrofolate synthetase + Prom 72287 - 72346 5.9 64 45 Tu 1 . + CDS 72406 - 72837 439 ## NT01EI_2085 hypothetical protein + Term 72976 - 73014 -0.6 + Prom 72952 - 73011 2.4 65 46 Op 1 12/0.000 + CDS 73048 - 73629 620 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 66 46 Op 2 10/0.000 + CDS 73629 - 74237 452 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 67 46 Op 3 12/0.000 + CDS 74230 - 76368 1675 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 68 46 Op 4 12/0.000 + CDS 76429 - 77421 865 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 69 46 Op 5 13/0.000 + CDS 77431 - 78066 615 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 70 46 Op 6 10/0.000 + CDS 78069 - 78779 843 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 71 46 Op 7 3/0.267 + CDS 78776 - 79417 604 ## COG0177 Predicted EndoIII-related endonuclease + Prom 79884 - 79943 5.5 72 47 Tu 1 . + CDS 80044 - 81555 1522 ## COG3104 Dipeptide/tripeptide permease + Term 81578 - 81606 1.0 + Prom 81694 - 81753 3.4 73 48 Tu 1 . + CDS 81780 - 82385 657 ## COG0625 Glutathione S-transferase + Term 82400 - 82438 3.1 - Term 82393 - 82418 -0.1 74 49 Tu 1 . - CDS 82445 - 83335 214 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 - Prom 83358 - 83417 7.7 + Prom 83320 - 83379 2.6 75 50 Op 1 4/0.133 + CDS 83443 - 84105 443 ## COG0288 Carbonic anhydrase 76 50 Op 2 . + CDS 84131 - 84601 530 ## COG1513 Cyanate lyase + Term 84620 - 84651 4.1 - Term 84605 - 84642 7.1 77 51 Op 1 5/0.000 - CDS 84659 - 85519 839 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase - Prom 85567 - 85626 2.3 - Term 85570 - 85596 -1.0 78 51 Op 2 5/0.000 - CDS 85753 - 87027 786 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 79 51 Op 3 3/0.267 - CDS 87157 - 87810 532 ## COG0259 Pyridoxamine-phosphate oxidase - Prom 87964 - 88023 11.2 80 52 Op 1 3/0.267 - CDS 88109 - 88420 229 ## COG3895 Predicted periplasmic protein 81 52 Op 2 . - CDS 88448 - 89563 1000 ## COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases - Prom 89589 - 89648 4.2 + Prom 89676 - 89735 4.5 82 53 Tu 1 . + CDS 89919 - 90389 539 ## COG3133 Outer membrane lipoprotein + Term 90419 - 90449 4.3 - Term 90297 - 90333 -0.1 83 54 Tu 1 . - CDS 90478 - 90909 355 ## COG1846 Transcriptional regulators - Prom 91037 - 91096 4.0 + Prom 90874 - 90933 6.1 84 55 Op 1 . + CDS 91085 - 91321 141 ## YE2145 putative inner membrane protein 85 55 Op 2 . + CDS 91328 - 91903 319 ## COG1566 Multidrug resistance efflux pump + Term 91974 - 92013 -0.7 86 56 Tu 1 . - CDS 91838 - 92104 147 ## COG1662 Transposase and inactivated derivatives, IS1 family Predicted protein(s) >gi|316919904|gb|ADCU01000006.1| GENE 1 331 - 606 137 91 aa, chain - ## HITS:1 COG:YPO0964 KEGG:ns NR:ns ## COG: YPO0964 COG3677 # Protein_GI_number: 16121267 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 87 1 87 91 148 85.0 2e-36 MAKVDVRCPFCEQTDPVKKHGHGKSGHQRYRCQTCKRTFQLDYAYRACQPGMKEQIVDLA MNNAGIRDTARALHISINAVVRTLKNSHPGM >gi|316919904|gb|ADCU01000006.1| GENE 2 599 - 1453 653 284 aa, chain - ## HITS:1 COG:YPO2270 KEGG:ns NR:ns ## COG: YPO2270 COG0038 # Protein_GI_number: 16122493 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Yersinia pestis # 1 264 6 269 431 335 75.0 8e-92 MKRLIHMQHYQLMLRRLVISMILGIAAATVVWLFHQSMLQLEWLFLGSRRGSLVAAAADL PLWRRLLTPALGGLVAGCILWLFQKYQHQRPSAPTDYMEAFDAGDGRLDVSASLVKSLAS LIVVSSGSAIGREGAMILLAALFASIFARYFTPFKEWKLWVACGAAAGMASAYHAPLAGS LFIAEILFGSLMLASLGPVVISAVSALLMSNLLNGGQETLYQVQILTAPWPIQYVLMAML GIIAGFTGPLFLMLMQYSSNFFRSSIQYVDYGVRSLLLMRGYDG >gi|316919904|gb|ADCU01000006.1| GENE 3 1601 - 2989 1190 462 aa, chain - ## HITS:1 COG:STM3820 KEGG:ns NR:ns ## COG: STM3820 COG1858 # Protein_GI_number: 16767105 # Func_class: P Inorganic ion transport and metabolism # Function: Cytochrome c peroxidase # Organism: Salmonella typhimurium LT2 # 1 459 1 460 466 710 71.0 0 MIKITKVLGIAATVGVVGYLGLAGYVYYHDKQRITMPEQASLSAQNAAVLKTLSEKGCDY CHTPSAKLPFYSQFPIAKQLMEYDINLGYKSFDLTPIRNSLIHDTPPPQGDIAKVEWVMQ HNTMPPTRYTALHWAGSLSEEERKGILNWVKDQRIKYYAAKDMSPALMNEPVQPLPRTIP VQADKVALGFRLYHDPRLSGDNSIACVHCHQLGAGGVDGRQTSIGVGGEVGPINAPTVFN AVFNVEQFWDGRAPDLQKQAGGPPLNPIEMASKSWDEITGKLNQDAALKQQFTAVYPEGF TGDTITDAIAEFEKTLITPDSPFDRYLRGDDKALTAQQLHGYQLFKDNKCATCHTGKILG GQAFEPLGLKQDFAFGHVTSADIGRLNVTQGERDRFRQKVPTLRNVALTAPYFHRGDVPT LDEAVKLMLKYQVGTTLPQQDVNDIVAFLESLNGVYTPYPIH >gi|316919904|gb|ADCU01000006.1| GENE 4 3331 - 4821 948 496 aa, chain + ## HITS:1 COG:lin0980 KEGG:ns NR:ns ## COG: lin0980 COG0477 # Protein_GI_number: 16800049 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 15 470 9 477 491 276 37.0 5e-74 MVEQVEQQHGQRGIVLTACMLATFMAAVEVTIVSTAMPTIIGDLGGFSLLGWVFAAYLLT QAISIPIYGRLADLYGRKSMFYIGASLFLLGSVLCGFANNMLWMIVFRAIQGMGAGAITP IAFTIVADIYSPAERPKIQGYLSSVWGVSAIVGPLMGAFIVQHFNWALVFWVNVPIGLTA MYLLWRYFPETLQPRVHPLDIAGTAWLTIAVASLLVALLQADILGYWVVPLLLISSIASF FLLRQERRAIEPLFPLELWRNKVIVAGNIGGLVVGASMMGVAAFLPTFVQGVMGGTPLQA GTTLAMMSIGWPIASALSGRMMLRTSYRATALFGSILLITGSLVLLMQQPDSGLLWGRIA AFIIGCGMGMTNTTFLVSVQNIAPPTMRGIATASTVFTRMLGSALGTAVLGATLNLNLDW RLPDIHDPVQKLMSLHREGFITDPAMQHLTEQVAASLHWVFMAAAILSLFALITAWLIPA KLKPQSAPNVELESEC >gi|316919904|gb|ADCU01000006.1| GENE 5 4875 - 5147 362 90 aa, chain - ## HITS:1 COG:no KEGG:YPTB2193 NR:ns ## KEGG: YPTB2193 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis # Pathway: not_defined # 1 80 1 81 81 106 67.0 3e-22 MKKSLIGIMLLGAIPLAAQASCETVKADISQKIINNGVPESGFTLDIVPNDQAESSGGQV VGHCENDTQKIIYQRINGNEDESTATPAAH >gi|316919904|gb|ADCU01000006.1| GENE 6 5191 - 5559 244 122 aa, chain - ## HITS:1 COG:no KEGG:ETAE_1723 NR:ns ## KEGG: ETAE_1723 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 23 122 12 111 111 145 72.0 5e-34 MKLKKLQVVARWMPLAAALIMGGWQASALADSCASGSTCVFGSSGGQDNSLTKEDARQQK EQWDDTRSLRNKVNTRVEKQFDKFDKAVDLQDACEKSLNVNAYWEPNTQRCLDRNTGRPL NP >gi|316919904|gb|ADCU01000006.1| GENE 7 5764 - 6510 628 248 aa, chain - ## HITS:1 COG:STM1511 KEGG:ns NR:ns ## COG: STM1511 COG4221 # Protein_GI_number: 16764856 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Salmonella typhimurium LT2 # 1 247 1 247 248 384 76.0 1e-107 MNIFVTGATAGFGEAITRKFIKNGHHVIATGRRLERLEKLKDELGDALTILQLDVRNRAA IQQALESLPVEKRRIDVLVNNAGLALGLEPAHKANIDDWDTMIDTNAKGLVNMTRAILPD MVERNVGHIINIGSTAANWPYAGGNVYGATKAFVKQFSLGLRADLHGTRVRVSDIEPGLV GGTEFSNVRFKGDNERVGKTYENANALSAVDIAEAVYWVATLPAHVNINTIEMMPVSQSF APLSVHRG >gi|316919904|gb|ADCU01000006.1| GENE 8 6601 - 6825 166 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MATYTYKYGKILDEIKAQQSFVRLSIDKVFSTISGHIRTRYINRQLLAMAVYYSVKEQIL ARTINNMYGKSYEF >gi|316919904|gb|ADCU01000006.1| GENE 9 6815 - 7777 770 320 aa, chain + ## HITS:1 COG:ECs2828 KEGG:ns NR:ns ## COG: ECs2828 COG3765 # Protein_GI_number: 15832082 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Escherichia coli O157:H7 # 5 316 23 337 337 184 37.0 2e-46 MSFEQKNNSDEIDLLDLLLQLWNGKKTIIAAVCIAIVLAIGYIVIAKEQWTSTAIITPPQ LGQLADYPTAVAVIDPSNSKDISNDVFANFVSRMSAETLAFMPEKPLDIKPTNSGSKDSF TVSFSAETPEEAQKSLLAVLSKVNKETSSSFYSNASKALQVRMDAINTSLDAQLQTAEAK KNRRLTALTEALKVAEATDTKNVAVKEVNGLSDDMLFMLGESALKTLINNESSWPLYLSD SYYSNRETLQALQKIKLSDTGNDKFEAFSYSQKPSLPMIKDAPKRALILILSVLLGGLIG AAIVLVKGFLRNMKDKNQAA >gi|316919904|gb|ADCU01000006.1| GENE 10 7903 - 8031 79 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFVIRVMLNISISQVYVGWINYNRMDNNENTRQMFCECIDYL >gi|316919904|gb|ADCU01000006.1| GENE 11 8003 - 8530 323 175 aa, chain + ## HITS:1 COG:no KEGG:KPN_04628 NR:ns ## KEGG: KPN_04628 # Name: yjdJ # Def: acyltransferase domain-containing protein # Organism: K.pneumoniae # Pathway: not_defined # 1 172 1 172 175 178 52.0 8e-44 MFSITRITNMDEKLYTLTDHLYANAFPYHEKREERAKHSALANPAYHLEAWEFDNTFVGF IGYWMFKHYAYIEHLAIDPSVRSRGFGKKILEHFLAHHPQTVLEIDPLTSEIAHRRLRFY QSLGFIQNDFVHHHPSYHAEMSDHQLIVLSSKQALSDEQYTTFCHDLRFVVMDGV >gi|316919904|gb|ADCU01000006.1| GENE 12 8687 - 9103 159 138 aa, chain - ## HITS:1 COG:no KEGG:CKO_03729 NR:ns ## KEGG: CKO_03729 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 138 1 138 139 159 57.0 2e-38 MIKSELIHPELLCSLAKCGHKTQVLIADSNYSVITNAPRQATVIYLNLTPGVIPATLILE KILTSINVEKAVLMAYPSDFINTIESEYRQILPENCPIEYLPRQDFYNQVKSDQTLLVIA SGEQRRFGNLLLTIAPVL >gi|316919904|gb|ADCU01000006.1| GENE 13 9159 - 9923 228 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 249 4 238 242 92 31 7e-18 MGTLAGKKVFITGAEQGIGRATAEQLIRSGCDIYLHYHSGEEGPKALAELAHSLGQKAAY GYADLINSEEAEHCVNTAAEFLGGIDILINNVGGIVGRKWLGEIDHQFWQTVLDVNMTTM LNVTQTALPFLKSSADGASIVNLASLAGRSGGHSGSLVYSTTKGAVLTWTRSLAAELGEH GIRVNAVAPGLILGTRFHNRHTTQESAEQTIQAIPLGRAGTPEDVARVISFLAAEYDGFI SGATIDINGGIYRM >gi|316919904|gb|ADCU01000006.1| GENE 14 9941 - 11269 728 442 aa, chain - ## HITS:1 COG:YPO2237 KEGG:ns NR:ns ## COG: YPO2237 COG0477 # Protein_GI_number: 16122465 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 10 427 18 432 436 269 36.0 8e-72 MNKRTPQDIERSAIKKLTLHIVPLMILLYFLAFLDRNNMAYAAMALEDSLGLTASAFGFA SGIFFIGYFMFEIPSNAGTIKFGPRIWFARILISWGVFATLLGFVRTPMELYICRFMLGV CEAGFFPSVVYYFTVFFPQKYRTRILGMFIIVQPLSNAIGSPISGFILNIDQGWFGLEPW QLLFIIEGIPPIIIGLLIPFIIKNSPKEVNYLDIEEKAWLMSSTERSKSGSKITLSDFFN GIKNRKYLLYAMLNFGMVCGIYGFGMWLPSIITAISGDDIFKVSLMALIPYGLAALLVYP WSLLASKTRKIGVFAGISMVVAAMGLVGAVIFFKYNVFVSLSFLCIAAIGIYTSVPPFLS MPANISSGAAAAAGLAVVSCIGNIGGFVAPYVVGVLNDMTHSSMPGLIFLSLCLLVTGLI CIFYCAKQREGVIQSESFSGKN >gi|316919904|gb|ADCU01000006.1| GENE 15 11334 - 11903 184 189 aa, chain - ## HITS:1 COG:STM3542 KEGG:ns NR:ns ## COG: STM3542 COG3265 # Protein_GI_number: 16766828 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Salmonella typhimurium LT2 # 18 185 5 172 177 201 56.0 6e-52 MSAKKTSSDCHIISEKPHNNHQLWILMGVSGCGKSAVAQRLSSALNIPSLDGDFLHPRHN VDKMANGQALDDDDRLPWLQALNQAAYAMLRTNPNSLMVCSALKKNYRDILRQNNAGIHF IFLSGNKDVVKERLQKRKGHFFKDTMLDSQFNTLETPDIDEKDIITVDINHTLDSVVSEC VRQINITNR >gi|316919904|gb|ADCU01000006.1| GENE 16 12010 - 13056 416 348 aa, chain - ## HITS:1 COG:BH2219 KEGG:ns NR:ns ## COG: BH2219 COG1609 # Protein_GI_number: 15614782 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 4 344 5 329 335 148 32.0 1e-35 MANIRDVARLAKVSISSVSNVLNNRVSQMSTETLLRIEQAIRDLNYRPARSLPSAGDEKN KIFGLLVPSIVNPSFSALAHEVDLAARVFRYRVLLGNSYRQEDEERAFIEDMFSHGVRGI IVAASDIRKTHFIRAAEKGMVIVSYDNHSPDGISNHAHIFDSVSMNNIEAGRLATRHLAE RGCKNIFFATETTLTLSRSHKIDGFLSELRQQNLPFQSRIIEGKASSEYGDTEMFELGLI LAPRIIKFPILPDGIVAINDALGIGLMVGLQAVGIRIPDDISLVGIDNISLSNLSSPALT SVMPPLAEMAQRMVGRLINRIAEPSLPIREYLFTPMLINRKSVRPLTS >gi|316919904|gb|ADCU01000006.1| GENE 17 13829 - 14332 10 167 aa, chain + ## HITS:1 COG:no KEGG:Pcryo_1369 NR:ns ## KEGG: Pcryo_1369 # Name: not_defined # Def: phage integrase # Organism: P.cryohalolentis # Pathway: not_defined # 2 126 29 147 462 63 35.0 4e-09 MFATIYGMNELSKKHLGTQENILCSLRFFYVYYFKKHKRTFDYDFYRSGYNISCFIRELD GFFTYLLGKQHLSDETDIISTGFLHSALSRTNKSTYGNHVRNVGRFLKYLNYRYMNLAYQ DMSPVEAHQINQANHRDLADRIKVFNRVEVSRNEPAHRYKSITSQQR >gi|316919904|gb|ADCU01000006.1| GENE 18 14446 - 14949 491 167 aa, chain + ## HITS:1 COG:no KEGG:Pcryo_1366 NR:ns ## KEGG: Pcryo_1366 # Name: not_defined # Def: hypothetical protein # Organism: P.cryohalolentis # Pathway: not_defined # 31 160 1 130 131 77 35.0 1e-13 MAKTPRSRNADDKVIQGKELDAYIKAELQAMVQEGLEKSPIQPSTLHARLKAKGIIQGGI STLTSRKSIINNYKLRQHNNYEDGKRELTIDEKDKLAKGRTGAAYISKANRLDTEIIALK AKYERNILALVDIIEYVDNATPIKVEDMLADDLIRELAERKRYSSTS >gi|316919904|gb|ADCU01000006.1| GENE 19 15399 - 15566 69 55 aa, chain - ## HITS:1 COG:AGpA535 KEGG:ns NR:ns ## COG: AGpA535 COG2801 # Protein_GI_number: 16119596 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 55 228 280 286 62 62.0 2e-10 MAESFFSSLKKERIRKHIYITWDMARAYIFDYIEMFYNWARRHSHLGGVSPEAFE >gi|316919904|gb|ADCU01000006.1| GENE 20 15717 - 19154 981 1145 aa, chain - ## HITS:1 COG:MA3203 KEGG:ns NR:ns ## COG: MA3203 COG1204 # Protein_GI_number: 20092019 # Func_class: R General function prediction only # Function: Superfamily II helicase # Organism: Methanosarcina acetivorans str.C2A # 274 678 23 388 730 155 30.0 6e-37 MIWRDGVLPPGAPDFSAQLSFDLHSYAYGLLGLGLRLLESDGDPNQARIAFEQAATALES VMANGNRDEADRDFHFLLAAASYHLAHLSARAYSLLAIVADEANFSPIEHALTLLIRRDI NSLRTRVYTFRLDGRGSDATITTFLQQHLTESIVADAAERDGKDFLFEGLNLALTDVFFG AFSMFLLALDRGEYILLERAIAQLRENLDICGELNLIPQWWVHRIAIHLLNDFWSNTFHE KVPLLPAGGVAPSWPVLRELFIGLLARRPRAEVDLWPSQIEAASRAVNQTDNLVVSLPTS AGKTRIAELSILRCLAGGRRAIVVTPLRALSAQTEATLQRTFGPLGKTISALYGSIGVSG FDEDAIRGRDIVVATPEKLDFALRNDPSLLDDVGLLVFDEGHMIGSGEREVRYEVQIQRL LRRQDADQRRIVCLSAILPDGDQMEDFSAWLRRDQPGGPIKNDWRPTRLRFGEVTWNSPT ARLNLRVGEERPFVPRFLTGAAPPLFVPPKKRRNRLFPDNQQELSLATAWRLVRDGQTVL IYCPERRSVEPFAKVIVDLHSRGALESLLTVELTTLQIAIALGEEWLGTDSYILKCLRLG VALHHGALPTAYRKEIERLLREGILKVTISSPTLAQGLNLSATAVVMHSLYRHGEMIKVS EFKNVIGRAGRAYIDVEGLVLYPIFEDVNNRKHNKWVNLIEDHGAREMESGLIQLIFSLL SRMHSHIGGNLDHLIDYVVNNAAAWVFPEVAGEKVDEREQALKEWDRHMATLDTAILSLI GEADVPDDQIETALDSILQSSLWQRRLLRVNDESRAAYRTALFTRSRYIWANSTAVTRRG YFLAGLGLEAGRALDVIAPEANNLLMQANAALVVSDHEAAITAITDIAERVFTFYPFEPD TLPANWREILRGWLLGHPLAMMIAGEEVDALQFIEGGLGYRLPWAMEALRVRAAANGDTV GMPALALEDYELGLAVPAVETGTMNCSASILIQAGFNSRLAAIKAVTDTAANFTNGVELR DWLRSPGLAVYSAQPNWPTAEARTIWLEFIQEFAPSDNLSWARRDYLGNVNWFDVPAPSG TPVGLFHWNGQPLVLAPDGHAIGLLQHPLNLNRRGLVRATVAMNNGQINLSYLGPDDLWV VAKPH >gi|316919904|gb|ADCU01000006.1| GENE 21 19234 - 20013 364 259 aa, chain - ## HITS:1 COG:no KEGG:RPC_3052 NR:ns ## KEGG: RPC_3052 # Name: not_defined # Def: hypothetical protein # Organism: R.palustris_BisB18 # Pathway: not_defined # 1 259 1 259 259 444 85.0 1e-123 MVPFYDWCDSADMPLGNHHVRVMTGRPGDIATGIQMTARAIPAHYTTEERIAAALAKLGK TAAAHMLNDLLPQTAQIRSGDLGEIYATEWIDAYSGYRAPIKRLRWKDHRNMAMRGDDVI GMLLDAETQRLSFLKTEAKSRINLRAQTLEEARSGLDKDSGLPSSHALSFISARLMEIGT DAPLVDAIDEALYRHGIPHESVKHLLFTFSGNPPQTLLTQALQAYPGPIGQWGVGLHIDN HAAFVGAVYDRVIADANNP >gi|316919904|gb|ADCU01000006.1| GENE 22 20669 - 21118 227 149 aa, chain - ## HITS:1 COG:no KEGG:SPAB_03413 NR:ns ## KEGG: SPAB_03413 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 1 148 131 278 279 139 47.0 4e-32 MYRLYKLDVIDFFDHLYTIEDNHNLHPNPKNAKVIPVKDDFIIRLSSAESKPNPKLLEHI CLTENVDIKDAIYVGDSITKDISMAKSIGMKAVWACYGRQFAPELWEILVKITHWTDKDV EREEQLKESFSRVKPDYSINSFAEILDLK >gi|316919904|gb|ADCU01000006.1| GENE 23 21502 - 23151 532 549 aa, chain - ## HITS:1 COG:no KEGG:SPAB_03414 NR:ns ## KEGG: SPAB_03414 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 3 531 4 523 537 260 33.0 1e-67 MKETYIFRFRDLGKSEGFTIDQHNQIAREEGDVWWGWWAKSGEVFPSQELRIAAENLTEI YFFDSGRLKFYRAELKEVCSSAAGDSKKKAPDNGRKTPRYYNEDELLGWLKVSEICEIHD NDDVLKTLSYIPLDSLFTTSKDLDEQLFNKVVFSVTELKEQDRTIWKVRPAIDADLQHEL LASHYIPYNFNQKYSQKKGEFIIWLSDIHFDNGKGKHAFPAQDNDQQKCLSSRVVELADK YSNGNKCAGLAISGDLTWQSQVEGFELASKFIKDVSSSLSLTPDDIIICPGNHDVGLVSK EEYFKIMGKPTTDTPWVTLAENYHKGSKENYIKFYKDVFQRKPEEDLSQGRKFLLGGHKI VEVAALNSCVLQQVKDSFLGMGFIGEKQLSNVAESMGWMNKSGEYISKKGGVTRIAMLHH HLTSINEAEDAYLDSKYSVTLDAERLLRWVVKHKVDYILHGHMHRSSCITIKKILSPLER VSDSNPEHTFQIVSLGSSGVASSELPSQDCANYSCIMDFSGEKLAFKFFKLDRQNGANET ATYTIEGLS >gi|316919904|gb|ADCU01000006.1| GENE 24 23329 - 26451 714 1040 aa, chain - ## HITS:1 COG:no KEGG:Bphyt_6474 NR:ns ## KEGG: Bphyt_6474 # Name: not_defined # Def: hypothetical protein # Organism: B.phytofirmans # Pathway: not_defined # 1 1040 1 1040 1040 1445 71.0 0 MDFIDKKILPPKSWEKFEDLTRALFAAVWRSPLTQKNGRSGQKQHGVDVYGTPQATPGIN FGVQCKGKNEGYGAKATIVEFDTELIKAENFKPQLGHWTFATTAPNDARLQEHARLVSEQ RVKEGKFPVVAIGWDTIQALLSTHQEVIEEIYPEHASDLPKIMATLRALPSSEELDQIRR SLIVFAPRSSVLNIEASVWSEVKFEKPRDLGPALMGRPLGPADVAACPILPEVALLTADL ERAGTARLAGVPGAGKSISILQVALQMYCRGWRVLRLADPIGKIPSFDESLKPTLYIVDD AHLTRPALLRELEEGATASRWVLSAYTISEDKSGFPGAIHLDAKRAVRVIANGFLASREA TLAAVRQADDRIGDRPGDEQFDLRLEHAAEKALYPWQFCFILGGGWRRANAMASSARAAG ADVVLAAAAIRQLASRDAHCSREMLLRLVGDELSNSDGNAAIDWLVAQRFLLSFNDLRCP HQRLAIVLLARILDGQTAEERQTIAVMLRTVLTDIQMPLSGLSVLLSELSLAGEFGMWRR LVQPAWLTPALERCWVATEPLDIRHACWLLNNLHSYLPDEMETIADHSETLAEWIQAAPE GACYAIGRVLNHVLNTNRALGENIVMLVDPRALAKAISAAAPLHAGEIADLLSMIGACRD DMWKACYLEHIDHDACLRIVSQWPQDAYLSVVADFCEHFCYVESEFGFTLIEALIPAIAD RLRAAPQESFHELNDIVWNALRLYDPLNIYVGKLAPSRRMRQVGRKICRCWSPKDLAISL SRSTQRNFQAAAGLLSFMHKASPKQFEETVLALNWSEIDQAIGSDWAENIGDARMLLGVA HIVPAARLAIQDMIARNEPRIVNMSTHLAAIAPASALRHIAAGRRIALSHWGHVDWPLGA LVLARIAQSEPTLVSTFLEPHYSGLAEALSQPSPTFYNEALMFLRLLVQVQPSGLIRVLD QIDVNRATLGWRNALRGQDNSREPGAKAQVRQVASLLVHHAMDRSDALGELARRLRRDFP RQSIPLAKTIESIDLSEPIE >gi|316919904|gb|ADCU01000006.1| GENE 25 26552 - 27985 276 477 aa, chain - ## HITS:1 COG:no KEGG:KP1_0574 NR:ns ## KEGG: KP1_0574 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_NTUH-K2044 # Pathway: not_defined # 1 475 1 475 477 748 73.0 0 MSYADWRVYQEATAEVFRRLGCNALVDYRAKGVRATHDIDVYATFLRSGILCTWVIECKL WKTRVPKEKVLALKSIIDDLGADRGIMVSEVGFQPGAQDAARGSNITLVTSLDDFAKTAR AATSEASLTLDSSDDGAPIYKFPSRFEPHDILLHNNFLITANWAGCSISIVNPSSKSIIR TIDLDKYESNSPQNGEREILSHPPGSLVIADGRLFVGQVFSDFVLVIDLATHAIVKRIVL PGGGDGQLAVSQNEKEIYFASNRVNQFYIIDSATYVVKTVAYPEGGRGCMSLLRHPTLPL IYIGIQRGGRIHGLSYPHANCYLAIYDLSRQTYTADVQLAEISNGRADDSTPACLTYDDL YNRIYVGMFQSKRGICVIEPESGELIQEIRFASNDNNNFFAWADPLSQTVSGDLLLSVNR NNHELVALDRASLQIKKILFVGEALNGPRAVLVWGDHAVVSYPSRNGLLFIPLGTLK >gi|316919904|gb|ADCU01000006.1| GENE 26 28006 - 28365 194 119 aa, chain - ## HITS:1 COG:no KEGG:Shewana3_1247 NR:ns ## KEGG: Shewana3_1247 # Name: not_defined # Def: hypothetical protein # Organism: Shewanella_ANA3 # Pathway: not_defined # 3 117 152 266 272 198 85.0 6e-50 MRRAELLDENYFHAVFEATKGGAERIRQLSGLSGDGADLVNKAFTGQQPVLTLGPLTTDS EKSEQKGFANLLIGLFGAVRNPLAHSPKKNWPMSELDALDILTLVSLIHRKLDGTQKKI >gi|316919904|gb|ADCU01000006.1| GENE 27 28814 - 29293 209 159 aa, chain - ## HITS:1 COG:no KEGG:Csal_1992 NR:ns ## KEGG: Csal_1992 # Name: not_defined # Def: hypothetical protein # Organism: C.salexigens # Pathway: not_defined # 18 146 17 145 159 123 44.0 2e-27 MALTPDQIRYLNQCEPGEPVAHALSELLFNDHDLLSIDANERSITFRFAMYLQLSFPGWN VDCEYNRDGVEPKRLRHLELYPDSEDVEAKTVFPDVIVHRRGTQQNHLVLEFKKSTSRVD RRIDLLKLQGYKQQLGYDHALFVEVGTEGQSIITALEWV >gi|316919904|gb|ADCU01000006.1| GENE 28 29898 - 30107 58 69 aa, chain - ## HITS:1 COG:no KEGG:AOLE_03795 NR:ns ## KEGG: AOLE_03795 # Name: not_defined # Def: chloramphenicol acetyltransferase # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 59 142 200 210 72 52.0 6e-12 MTKDVPDYAVVGGNPAKILKYRFSESDIGRILALNIYDRSEDELESVRTLLSSNDLDALE FALRASANP >gi|316919904|gb|ADCU01000006.1| GENE 29 30140 - 30529 125 129 aa, chain - ## HITS:1 COG:VCA0253 KEGG:ns NR:ns ## COG: VCA0253 COG0110 # Protein_GI_number: 15601021 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Vibrio cholerae # 1 128 17 144 232 196 67.0 8e-51 MKEKHWSKLEYLHLTVKNPNILVSGTHSYYSDCWDNGFEKSVVRYLHGDRISQSWEPLGK IDKLRIGDYVCIGAESVILMGGNHNHCMDFISLYPFMETITDTYRHRGDTVLNDGCWLGM RCMIMPGLP >gi|316919904|gb|ADCU01000006.1| GENE 30 30833 - 32272 1125 479 aa, chain - ## HITS:1 COG:YPO2288 KEGG:ns NR:ns ## COG: YPO2288 COG0775 # Protein_GI_number: 16122512 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Yersinia pestis # 3 471 10 488 546 823 85.0 0 MHLTASEALDRLEALYESALAALRTAISDYISDGKLPDVGARAKGLFAYPQLSVSWDGKF RDHLRTRAYGRFSRTGQYSTTIARPALFREYLSEQLTLLETEYGASFEVTPSQQEMPYPF VIDGSDLILDRTMTAGLAQHFPTTDLAQIGDGITDGLETGGDFFPLSHFDALRTDFSLAR LKHYTGTPAEHIQPYILFTNYSRYVDEFVSWACEQILDPNSPYEALSCAGGSYITAETAD PEKTTSDLAWKKHQMPAYHLISANGQGITLVNIGVGPSNAKTICDHLAVLRPHVWLMIGH CGGLRESQSIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKAVSGMPGEE VKQRLRTGTVVTSDDRNWELRFSASALRFSLSRAVAVDMESATIAAQGYRFRVPYGTLLC VSDKPLHGEIKLPGQANHFYEGAISEHLQIGIRAIDLLRAEGDKLHSRKLRTFNEPPFR >gi|316919904|gb|ADCU01000006.1| GENE 31 32368 - 32859 346 163 aa, chain - ## HITS:1 COG:SMc00380 KEGG:ns NR:ns ## COG: SMc00380 COG1846 # Protein_GI_number: 15964053 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 2 156 4 160 164 136 45.0 2e-32 MEQDHVDKIIAQWQRERPDLDCSPMGIIGRMARMGQLLSSKVTQVYEQHGLDTIEFDILA TLRRSGELITPTELYQTVMLSSGAMSVRLERLESRGLVFKQPNEHDKRSCKIGLTEEGLK VIDRALEHHVQNEKQILEPLSADERQQLAGLMRRWLLHNEPAE >gi|316919904|gb|ADCU01000006.1| GENE 32 33132 - 33797 440 221 aa, chain + ## HITS:1 COG:SMc00381 KEGG:ns NR:ns ## COG: SMc00381 COG0697 # Protein_GI_number: 15964054 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Sinorhizobium meliloti # 8 216 72 282 290 106 37.0 4e-23 MLAISLCNISFFFVLLFIAAHRLPGSVAGTLGATLPLMVLLLQWVQEGKKPALSKLGLAL LGLFGVVLLLNPSANLDPIGVAAALLGTLLMAQTSLWIARWPTHDQLGLAAWQLFLGGVI LLPFAFMFAGAPALPTPKTWVGLIWLVVCNTAFAYWCWTRSVSLLGPHTMSMISLFNPVT AVLLGSIFLSERLSITQWSGIALIFISILLMKVIKTKPVVL >gi|316919904|gb|ADCU01000006.1| GENE 33 33917 - 34189 203 90 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNTFGLTRTYAGILIVENCRCAQYDHIEENFHLAVQKYSYLVRPGEHIDGPEWVSRIQQR ESNHNIDHLLTAILAMMHSDPEIEHECVYY >gi|316919904|gb|ADCU01000006.1| GENE 34 34249 - 34863 637 204 aa, chain - ## HITS:1 COG:STM1608 KEGG:ns NR:ns ## COG: STM1608 COG0500 # Protein_GI_number: 16764952 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Salmonella typhimurium LT2 # 8 202 2 196 198 273 66.0 2e-73 MNSDNNTTARDGDYYTRKYQLTATHSEVLNAAKIVPVGKALDLGCGRGRNSLYLNSKGFD VTAWDKNPMSIASLNEVIQAEGLVNISAHEVDLNTQRFSGEYDFILSTVVFMFLDRQQIP AIIDNMQASTRVGGYNLIVAAVDSPDYPCSVPFSFTFKPDELRNYYAGWEFAKYNEDVGE LHRIDANGNRIKMRFATMLAKKVN >gi|316919904|gb|ADCU01000006.1| GENE 35 35072 - 36859 1319 595 aa, chain - ## HITS:1 COG:YPO1229 KEGG:ns NR:ns ## COG: YPO1229 COG0840 # Protein_GI_number: 16121516 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Yersinia pestis # 1 595 1 595 595 643 69.0 0 MFDSIRSRILAASTAIVICSLSINTYLNYSIANKYNNSAIDSTLEAVSSSHNRAIADWVA SKSHLVASLTPHVTSPDPMPLMVQVANGGNFMGIDIGYPNKIDISSVPNSVPEGYDPTTR PWYVQAVKAGKPIITAPYIDVNTKKMVVTFAAPSIENGVLKGVVEGDVTMDSVIENVRSI HLTDSSFGMLIDSEGNIMAHPDESLTQKSLRSIAPTLDLSRLLNARTPIESEISGSVKLL LAQPVAGTSWFTVVAMDKTEATAGMRSLLTTSLVTLLVLIVIAAVIIGVIAQRALKPLIR IRDAMDAISSGTEDLTQRLPTDGKDEVSQIAGAFNRFVDKLSAVMKTIRNSSESVRVAAN EIASGNQDLSSRTESAAANLQQTSAALEQISSTVAQSAGAAKQANSAVQSASADASRGGE AIAKVINTMQSIETASGKIGDITGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE VRTLAQRSAQAAKEIKTLIESTVRSVSSGSTQVRQTSDTMTDIVTSVSAVTAIMSEITNA ADEQMRGINEINKAVTHLDTMVQQNAALVEESTAASGALLSQANDLVGAVGQFNV >gi|316919904|gb|ADCU01000006.1| GENE 36 37116 - 38303 1027 395 aa, chain + ## HITS:1 COG:STM1522 KEGG:ns NR:ns ## COG: STM1522 COG2814 # Protein_GI_number: 16764867 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Salmonella typhimurium LT2 # 1 387 1 387 396 457 74.0 1e-128 MNKTPVSRKTAWLRVITLAVAAFIFNTTEFVPVGLLSDIAASFSMSTAQVGLMLTIYAWV VALMSLPFMLMTSQMERRGLLVKIFVLFIVSHVLSVVAWNFWILVISRIGIALAHAVFWS ITASLAIRLAPAGKKAQALSLLATGTALAMVLGLPLGRIIGQYLGWRTTFLVIGILATIT LICVLKLLPKLPSEHSGSLKSIPILARRPALLCLYALTVIVVTAHYTAYSYIEPFIQTVA SMSQGFATMLLLILGAAGIIGSVLFSMLGNKHPTALIIGAIVLLALSLLLLLPAAASPLW IALLCVVWGVAIMTIGLGMQVKVLAMAPDATDVAMSLYSGIFNIGIGAGALLGNQISIHF SMANIGYIGAALALVSLLWCVFIFRRYAEVMAKGY >gi|316919904|gb|ADCU01000006.1| GENE 37 38325 - 38792 425 155 aa, chain + ## HITS:1 COG:lin0965 KEGG:ns NR:ns ## COG: lin0965 COG0457 # Protein_GI_number: 16800034 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Listeria innocua # 1 151 1 151 155 139 54.0 2e-33 MILSALKAQNYALALDTAEAELAIIPNSALNHYYAAWACDGLGQENRAIPHYEKAIALGL PDADLKEAYLGLGSTYRVTGNYQQAYDLLTQAVAHFPNDRALQVFYALAKYSMGDAKSAL RDTLLLLTSTTQDDGILAYRKAIDFYAQDLDFISD >gi|316919904|gb|ADCU01000006.1| GENE 38 39419 - 41422 1470 667 aa, chain - ## HITS:1 COG:ECs2039 KEGG:ns NR:ns ## COG: ECs2039 COG0826 # Protein_GI_number: 15831293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 10 656 20 665 667 1070 79.0 0 MLRSDVSHKNKIELLSPARDVAIAREAILHGADAVYIGGPDFGARHNAGNSLSDIAELVT FAHRYGVKIFVTLNTILHDAELEPARRLIHQLYDAGVDALIVQDLGILELDIPPIELHAS TQTDIRSVEKAKFLSDVGFSQIVLARELNLSQIKNISDSIDATVEFFIHGALCVAYSGQC YISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVAYEKHLLSMKDNDQSQNLIALIDAGV RSFKIEGRYKDMSYVKNITAYYRQHLDAIMNERPELAPASMGRTEHFFVPSPDKTFHRGS TDYFVNQRKMDIGAFDSPKFVGLPMGEILKVGKDHIDVSVTEPLTNGDGLNVLIKRDIVG FRASKVEKIAANSFRVWPNEMLDALKNIRPHHPLNRNLDHNWQQALLKTSSERRIGVKLR LEGNEKQLMLTATAADGVSVTQTLAGDFDVAKQPEKAFSNLHDGLAKLGQSIYFSQGIEI NLPTAYFVPNGLLNQLRRETIDMLTEARLHAYQRGHRKAVSKPAPVYPETHLTFLANVYN HKAREFYQRYGVQLIDAAYEAHQEKGDVPVMITKHCLRFAFNLCPKQAKGVQGVKGRASP MQLIHQDEVLTLKFDCKPCEMHVIGKIKNHILKMPLPGSVVASVSPEELMKTLPSKSASA TKAKVRR >gi|316919904|gb|ADCU01000006.1| GENE 39 42044 - 42799 766 251 aa, chain + ## HITS:1 COG:STM1660 KEGG:ns NR:ns ## COG: STM1660 COG0664 # Protein_GI_number: 16765004 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Salmonella typhimurium LT2 # 1 248 15 262 264 463 92.0 1e-130 MIPEKRVIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQALFK AGDELKSLYAIRSGTIKSYTITEQGDEQITAFHLAGDLVGFDAIGNQQHPSFAQALETSM VCEIPFETLDDLSGKMPSLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSEILSVKGKYITIQDVDALS LLAGNPRSTNE >gi|316919904|gb|ADCU01000006.1| GENE 40 43006 - 43965 736 319 aa, chain + ## HITS:1 COG:YPO2301 KEGG:ns NR:ns ## COG: YPO2301 COG0589 # Protein_GI_number: 16122525 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Yersinia pestis # 1 315 1 315 318 560 82.0 1e-159 MAKYQNLLVAIDPNQDDQPALRRAVYLVQRNGGRITAFLSIYDFSYEMTTLLSPDERMSM RQGVISQRSAWIKEQCRYYLEAGVPIEIKVVWHNRPFEAIIQEVISGKYDLLLKMAHQHD RLESVIFTPTDWHLLRKCPCPVWMVKDQPWPQNGTALVAVNLSSEEPYHDPLNIKLVKES LELAEHVDHTSLHLVGAYPVTPINIAIELPDFDPSIYNDAIRGQHLLAMKALRQKFGMKE ECTHVEKGLPEEVIPDVAEHLNAGVVVLGTLGRTGISAAFIGNTAEHVIDHLKCDLLAIK PDGFQSPVELDDDDEHDDE >gi|316919904|gb|ADCU01000006.1| GENE 41 44171 - 45103 606 310 aa, chain + ## HITS:1 COG:no KEGG:ETAE_1709 NR:ns ## KEGG: ETAE_1709 # Name: tus # Def: DNA replication terminus site-binding protein # Organism: E.tarda # Pathway: not_defined # 1 310 1 308 312 394 63.0 1e-108 MSANHVIDRMNVCFHQLEQGLIEIDAVLKSLTPLQANVFQLPDIEKGKEHDEVTHISVIP CSGETAFDAGLQHFRRLFIHHHAQHISSKAAVRLPGVLCYSATYSQVKSTSALISEVNQL KKQLEKIIAVESGLPPEQRFEFVHAHLKGLITLSAYRSLTVLHNPTTVRFGWANKSVIKN MQRDEVIARLEKSLTANRSVPPYSREQWAELVSQELEDVMRLPEGAKLKIKRPVKVQPIA RVWYQEEQKQVQHPCSMPLISLTDEFSETPVPLLGDLGDYDADNIQVKHRPRAKKLELLI PRLHLYRELD >gi|316919904|gb|ADCU01000006.1| GENE 42 45125 - 46525 938 466 aa, chain - ## HITS:1 COG:YPO2264 KEGG:ns NR:ns ## COG: YPO2264 COG0114 # Protein_GI_number: 16122488 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Yersinia pestis # 1 462 1 462 465 744 79.0 0 MTAMRVERDSMGDIDVPQARLWGAQTQRSLEHFRISVEKMPQALIDALAVVKKAAAQVNL DLGLLSEEKAEAIMQAAQEVIDGFRYQEFPLAVWQTGSGTQSNMNMNEVLANRASELLGG ERGNERKVHPNDDVNKSQSSNDVFPTAMHVAAVVAIRQQLLPQMDVLIQTLQEKSDQFRH IVKIGRTHLQDATPLTLGQEISGWVAMLVHSKKHIEYGLEHLYELALGGTAVGTGLNTHP EYAVRVAKAIAQLSGCDFVTAPNKFEALASCDGLVQAHGALKGLAASMMKIANDVRWLAS GPRCGIGEISIPENEPGSSIMPGKVNPTQCEAVTMLCAQVMGNDVAVNIGGASGNFELNV FRPLVIHNFLQSVRLLADGIESFNEHCARGIEPNRPRINQLLNESLMLVTALNTHIGYDK AAEIAKKAHHEGLTLKESALMLGYVTAAQFDEWVRPQDMVGSTIRS >gi|316919904|gb|ADCU01000006.1| GENE 43 46724 - 47899 961 391 aa, chain + ## HITS:1 COG:YPO2263 KEGG:ns NR:ns ## COG: YPO2263 COG1482 # Protein_GI_number: 16122487 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Yersinia pestis # 1 389 1 389 391 543 70.0 1e-154 MQKMINAVQNYAWGSHDALSNLYGFPNPDNKPMAELWMGAHPLSSSMVLDKNGHKVSLRD EIAKDLNGNLGNAVAKRFGELPFLFKVLCAAQPLSIQVHPSKHAAEEGFAREESAGIAIN AANRNYKDPNHKPELVYALTPFKAMNGFRELTEIAQLLQPVADAHPDIAQFIQHPDEQHL AALFGNLLSMTGEQKAHALSVLAEALNHQQGSAWDAIRSIAQVYPDDSGLFSPLLLNTIE LTPGQSMFLYAETPHAYLNGVGLEIMANSDNVLRAGLTPKYIDVPELLANVKFVPKPANS LLTTPIITGNETRFPIPVEDFAFAVHTLTDAPQSLAQESAAVLFCIEGEATLSKGEQRIT LAPGESCYLPANESPVIVQGHGQLARVFNEL >gi|316919904|gb|ADCU01000006.1| GENE 44 48113 - 49609 1451 498 aa, chain + ## HITS:1 COG:YPO2262 KEGG:ns NR:ns ## COG: YPO2262 COG5339 # Protein_GI_number: 16122486 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 493 1 488 514 491 53.0 1e-138 MKKSAVAVAVIVVLGAAWTGASWYTGKLIEQRMTTEVENVNSQLNNYFPKAGLKLSYEDY NRHLFSTDVRYILQNDPSFKGEPSLKAGEQIVLKETITHGPFPLAQLKNFNFVPSMASVH TELENTPAVKVLFDATKGKSLVDADTRIAYNGDTQSKITLIPVDYAKDKISVKFDGAVIN ADVAKDLSTLKFDMNSDNVVISAPNEMSQQEQITLQGFTMESDSHRGKFDLNIGSQKMNA KHLSVSVDGKESAVLDGFKLDANMGEDDKNLNGVLNYTLDALKISGKDFGQGALTLKFNG VDGKGLKTFASQYNDFINRQLAQGDDLDPDVYQQELAALVEKNMPALLAGNPTLNIQPLS WKTSQGESQFSLDLNLVNPQPQAETADEPLMLQSIKKLDAKLAISMPMATQLASQAAELE GYNAEDAKRLAGQQVQGISAMGQMFKLTTQKDNMISSSFSYANGQVDLNGTKMPLAQFVG LFGILGGMQDQGEAPAGN >gi|316919904|gb|ADCU01000006.1| GENE 45 49814 - 50845 742 343 aa, chain - ## HITS:1 COG:malI KEGG:ns NR:ns ## COG: malI COG1609 # Protein_GI_number: 16129578 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 3 339 4 340 342 355 51.0 6e-98 MNSKKITITDVAQHAGVSVTTVSLVLSGKGRISDKTSSRVNHAIETLGYVRNQQAAMLRG SVSNVIGLIVSDISEPFYAEVAAGISEVLEAQGKVLFLTQCGKNGRNLARCLDSLSGYGV DGIIVGSGRFLSDEMKQKAREMHLPLVCAARASEFDDIDVIRPDNSQAAKIATEYLIKHG HRQIAYLGGESSSLTRAERLGGFCGTLIQYGLPFKSEWIIECECKQQAAAQATQTLLNHY PKVTAILCHKASIAMGAYFGVIGMGNSVGKDENESYYNRQVALIGFGDVPEAELTDPPLT FISSSAREIGYSAANRMLQRIDAPDEQAQHIILPPKLIARGSA >gi|316919904|gb|ADCU01000006.1| GENE 46 50942 - 51073 59 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTYKTKMTYKSIDGYSAILVKEDKTFYQTKPFAGSQFSESVLM >gi|316919904|gb|ADCU01000006.1| GENE 47 51193 - 52722 1475 509 aa, chain + ## HITS:1 COG:malX_1 KEGG:ns NR:ns ## COG: malX_1 COG1263 # Protein_GI_number: 16129579 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 429 23 450 450 685 82.0 0 MLPVALLSFCGIMLGIGSSLSSRDVLTLLPMLDNAPLQLLFTWMSKVGSFAFSFLPVMFA IAIPLGMARENKGVAAFAGFVGFAVFNLATNFYLTTKGILPTVDPLMLKANNIQNIIGIQ SIDTGILGAVIVGIVVYLLHERFNTIRLPDALAFFGGTRFVPIITTLVLGLLGLLVPLIW PWFAMGINGLGKLIHNAGVFGPMIFGSGERLLLPFGLHHILVALIRFTEAGGTMDVCGNS VSGALTIFQAQLSCPTTHGFSESATQFLSQGKMPAFLGGLPGAALAMYHCARPENRHKIK GLLISGVVACVVGGTTEPLEFLFLFVAPFLYVIHAILTGLGFTIMSMLGVTIGNTDGNII DFVVFGILHGLQTKWYLVPVVAAIWFVVYYAIFRFAITRFNIKTPGRDVDNSATSEKSAK NASSSKSGYDVPGILTALGGAENIVSLDNCITRLRLSVKDMSLVDDATLKNLRAIGVVHL NEHNLQVVIGPQVQSVKDELDYLIAQPSA >gi|316919904|gb|ADCU01000006.1| GENE 48 52810 - 53985 1022 391 aa, chain + ## HITS:1 COG:malY KEGG:ns NR:ns ## COG: malY COG1168 # Protein_GI_number: 16129580 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Escherichia coli K12 # 1 386 1 386 390 588 68.0 1e-168 MFDFSKTVDRHGTWCTQWDYIADRFGANDLLPFTISDMDFATAPCITETLEKRIAHGVLG YSRWQHEDFLGALRHWYAKRFNSAIDTDTAVYGPSVIYMVAQLIRLWSQPGECVVTHTPA YDAFYKVVLGNQRQLLSCPLKQKEGEWYCDMAHLEALLARPQTKVLLLCSPQNPTGKVWT QAELHIMAELCERHDVKVISDEIHMDMTWGEHRHTPWNEVGKTPWALLTSASKSFNIPAL TGAYGFINDPATRDAYFLQLKSKDGLSSPAVLAVAAHIAAYREGQPWLDELRGYLQANLE YVAHELNAAFPQLNWKIPQATYLAWIDLRALAVDDQALQRILIDEEKVAIMPGFTYGEEG RGFVRLNVGCPRSKVELGVQKLISALNKLVK >gi|316919904|gb|ADCU01000006.1| GENE 49 54221 - 54490 251 89 aa, chain + ## HITS:1 COG:ECs4308 KEGG:ns NR:ns ## COG: ECs4308 COG4453 # Protein_GI_number: 15833562 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 88 1 88 88 104 70.0 5e-23 MPALKKQRIDLRLTDDDKSKIEEAAAMTNQTITQFMVASAAERAEEVIEQHRRLVLNDES WNLVMDAISNPPAPNSRLKRASKRLASME >gi|316919904|gb|ADCU01000006.1| GENE 50 54494 - 55018 249 174 aa, chain + ## HITS:1 COG:ECs4307 KEGG:ns NR:ns ## COG: ECs4307 COG0454 # Protein_GI_number: 15833561 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 1 171 1 171 175 246 64.0 1e-65 MPDLAIEIFSNDVEYDFAHFDCGEESLNIFLTNHLARQHNARILRGYLLVTKEPKPKVVG YYTLSGSCFEKETLPSNTQKRKVPYANVPSVTLGRLAIQKELQGQDWGTTLVTHAMKVIY HASLAVGIHGMFVDALNEKAKRFYLQLGFIALTGNNANSLFYPTKSIEKLFEDE >gi|316919904|gb|ADCU01000006.1| GENE 51 55200 - 56198 1142 332 aa, chain + ## HITS:1 COG:STM1463 KEGG:ns NR:ns ## COG: STM1463 COG1816 # Protein_GI_number: 16764811 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Salmonella typhimurium LT2 # 1 329 1 329 333 531 79.0 1e-151 MIDTRLPLTDIHRHLDGNIRPQTILELGRQFNLELPAEELEALRPHVQITDTAPDLVSFL QKLDWGVAVLGSLDACRRVAYENVEDALRAGIDYAELRFSPYYMAMKHQLPVQGVVEAVI DGVRSGVRDFGVETRLIGIMSRTFGEGACLKELDALLACREGITALDLAGDELGFPGSLF LSHFNRARDAGLRITVHAGEAAGPESIWQAINELGAERIGHGVKAVEDAKLLDYLAEKRI GMESCLTSNIQTSTVASLESHPLKTFLRHGILASINTDDPAVEGIELAHEYNVAAPAAGL TQEEIRTAQINGLEMAFISDAEKQVLREKKLG >gi|316919904|gb|ADCU01000006.1| GENE 52 56773 - 57771 831 332 aa, chain - ## HITS:1 COG:YPO2260 KEGG:ns NR:ns ## COG: YPO2260 COG0385 # Protein_GI_number: 16122484 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Yersinia pestis # 1 320 1 320 342 461 85.0 1e-130 MSWLQRLRIDKFLLVLITVVILASLFPCEGIYKTIFEHLTTAAIALLFFMHGAKLSREAI VSGMGHWKLHLVVFLSTFALFPLLGLALNVVVPNLLSPALYLGFLYLCALPATVQSAIAY TSMAGGNVAAAICSASASSILGVFLSPLLVGLLMHTQGGETDTLHAIGAIILQLMVPFII GHLSRPLIAKWVERHRKLINITDRSSILLVVYTAFSEAVIEGIWHQIDGWSLLSIVVFST ILLAIVLVINTFAARWLGFNTADEITIVFCGSKKSLANGIPMANVLFPASAVGMMVLPLM IFHQIQLMVCAVLAQRYVNRAKAKKVLEESEG >gi|316919904|gb|ADCU01000006.1| GENE 53 57916 - 58959 987 347 aa, chain - ## HITS:1 COG:STM1462 KEGG:ns NR:ns ## COG: STM1462 COG0673 # Protein_GI_number: 16764810 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Salmonella typhimurium LT2 # 1 345 26 370 371 511 68.0 1e-145 MADSIRVGLVGYGFAGKTFHAPLIAGTPGLELAAISSSDAHKVLADWPGMTVVGEPGQLF SDPSIDLVVIPTPNITHYPLAKQALLAGKHVVVDKPFTVNLQEARELEMLAKQQKRLLSV FHNRRWDSDFLTVKTLLSEGALGDVVQFESHYDRFRLEVRDRWREKVGAGSGIWFDLGSH LLDQALQLFGKPQSLLADLCAMRPNSQTTDYFHAILYYSDKRIILHGSMVTAAETPRYVI HGTKGSYIKHGLDPQEDRLKAGERPPQADWGYDMRDGVLTLVQDDMMAEQSLLTIPGNYP AYYAGIRDAINGDGENPVPASEAITVMELLELGQESSLQQRALPLPA >gi|316919904|gb|ADCU01000006.1| GENE 54 59208 - 60248 613 346 aa, chain - ## HITS:1 COG:SMb21353 KEGG:ns NR:ns ## COG: SMb21353 COG1638 # Protein_GI_number: 16264677 # Func_class: G Carbohydrate transport and metabolism # Function: TRAP-type C4-dicarboxylate transport system, periplasmic component # Organism: Sinorhizobium meliloti # 10 293 11 289 325 64 25.0 3e-10 MELTNRLLPILLAGFLLPNTVLAAKILKYSDHEALGGARTQFINDVFFSSIENESHGRLK IESHWGGELGAGYDALALVRQGTKADMAIVVPEYTAKQLPLHQIFKSFPVGPAADRQVDF FRRVYTQLPVFPLELEKNNVVNLYFATGYPVAFFSTKPMTSLADVKGGTWRSASFWHQDF LTNAGAKAVTMPWGDRTRKALQSGALDGIMVNLDSGYDVEAHKTSPHILISKNLWLGHIY LLVMNKNTWDGLEKQDQEAIQRAAEIAYKKQGSVMDSSLTAQIADMRQEGAKVQFLSADK LQQWKTLSRYQEVQENWLKEQENAGVKDASATMMKVSQMINGAMKE >gi|316919904|gb|ADCU01000006.1| GENE 55 60284 - 61237 668 317 aa, chain - ## HITS:1 COG:YPO2258 KEGG:ns NR:ns ## COG: YPO2258 COG2207 # Protein_GI_number: 16122482 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 5 295 1 289 310 508 83.0 1e-144 MGGTMYQRLTQEPQPNPLLPGYSFNAYLVAGLTPIIAGGPLDFFIDRPEGMKGYILNLTI KGQGRIFSGKDGEETLDSKPGELLLFPPKASHYYGRSSESDCWYHRWVYFRPRAYWADWL EWHSQVNGVGHMVLPENTLLEFDRLFANIEQTHKSGRRFAEELAMNLLERLLLRAMEEDP QAPQRIMDARVIEACQFITGNLADELRIEDVAKHVCLSPSRLAHLFREQVGVNILRWRED QRVIRAKLLLQTTQEPIATIGRVVGYDDQLYFSRVFRKRVGVSPSDYRRRNHEVNDSSSM SAGERRQSERQSTLLRV >gi|316919904|gb|ADCU01000006.1| GENE 56 61402 - 62397 1039 331 aa, chain - ## HITS:1 COG:YPO2257 KEGG:ns NR:ns ## COG: YPO2257 COG1172 # Protein_GI_number: 16122481 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 17 329 36 348 349 502 93.0 1e-142 MSSVTSTPATAKSGNKGLNLSRIWDSYGMLVVFAALFIACLIFVPNFGSFINMKGLGLAI SMSGMVACGMLFCLASGDFDLSVASVIACAGVTAAVVINMTESLWIGIFAGLLLGALCGL VNGFVIARLKINALITTLATMQIVRGLAYIISDGKAVGIEDERFFELGYANWLGLPAPIW ITVACFILFGFLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAAAGII LASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVIAGVLILGTVENAMNLLNI SPFSQYVVRGVILLAAVIFDRYKQLAKKTRA >gi|316919904|gb|ADCU01000006.1| GENE 57 62420 - 63940 1693 506 aa, chain - ## HITS:1 COG:YPO2256 KEGG:ns NR:ns ## COG: YPO2256 COG1129 # Protein_GI_number: 16122480 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Yersinia pestis # 6 499 7 500 512 809 81.0 0 MTSNVPYLEFRHIGKTFPGVKALDDISFSCQAGQIHALMGENGAGKSTLLKILSGSYTPT QGEIYLKGQPVQFNNTTDALDAGVAIIYQELYLVPEMTVAENIYLGQLPAKKGFVNNSLL NYESRLQLEHLGLDIDPQTPLKYLSIGQWQMVEIAKALARNAKVIAFDEPTSSLSSREIE QLFRVIRELRAEGRVIIYVSHRMEEIFALSDAITVFKDGKYVKTFDDMQQVNHDSLVQAM VGRDLGDVYGYQPREHGPIRLEVKDVVAPGVKHPVSLQVKQGEIVGLFGLVGAGRSELMK GLFGGTKITQGQVILDGQDMRVGSPIDAIRQGMMLCPEDRKADGIIPVHSVRENINISAR RNALTAGCLINHQWEVENADKRIDALNIKTPSPEQLMMNLSGGNQQKAILGRWLSEDMKV ILLDEPTRGIDVGAKHEIYHVIYQLAQQGIAVLFASSDLPEVLGLADRVIVMREGEVSGE LLRSEASEAKALALAMPRTSTSSHAA >gi|316919904|gb|ADCU01000006.1| GENE 58 64038 - 65018 893 326 aa, chain - ## HITS:1 COG:YPO2255 KEGG:ns NR:ns ## COG: YPO2255 COG1879 # Protein_GI_number: 16122479 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 1 326 1 326 327 573 89.0 1e-163 MHKFTKVLAAIGLAAVMSQSAIAESMKLGFLVKQPEEPWFQTEWKFADKAGKDLGFDVIK IAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGPAIMAKARSYDLKVIAVDDQFVNAKG KPMESVPLVMMAASEIGARQGQELWKEMNKRGWKVDETGVMAITADELDTARRRTTGSMD ALKAAGFPEKQIYKVPTKSNDIPGAFDAANSMLVQYPKVKNWLIVGMNDNTVLGGVRATE GQGFKAENVIGIGINGVDAVSELSKANPTGFFGSLLPSPDIHGYKSIQMLYDWVTKGVEP AKFTAVTDVVLITRDNFKEELQKKGL >gi|316919904|gb|ADCU01000006.1| GENE 59 65425 - 67101 1388 558 aa, chain + ## HITS:1 COG:YPO2254 KEGG:ns NR:ns ## COG: YPO2254 COG1069 # Protein_GI_number: 16122478 # Func_class: C Energy production and conversion # Function: Ribulose kinase # Organism: Yersinia pestis # 6 553 12 559 567 861 77.0 0 MHANPIAIGLDFGSDSVRSLAVDCVTGQELDTEVVYYPRWKQGLFCDAPANQFRHHPLDY IESLEIAIKAVVARMNEEQRAAVVGIGVDSTGSTPAPINEKGDVLALLPEFANNPNAMFV LWKDHTAIEEAEEINRLCRSGDFPDYTRYIGGVYSSEWFWAKILHVTREDRAVRQSAVSW VELCDWVPALLCGEKQPQNLKRGRCSTGHKALWHPSWGGVAPRKFLEALDTCLSEKLQQP LFTETYTADLPIGKLSAEWAQRLGLTTDVVLSGGAFDCHMGAVGAGAQPYTLVKVIGTST CDILIAEQERIGDRTIAGICGQVDGSVVPGYIGLEAGQSAFGDMYAWFSHLLTWPLLQTA KQHPELAAQLEESAKNLLPALTEAWAKDPQLNHLPVVLDWFNGRRTPFANQRLKGVITDL NLGTDAPTLFGGFIAATAFGARAIMECFEHQGVPVENVLALGGIARKSPVIMQVCCDVMN RPLQIVASDQCCALGAAIFAAVAAGTYPDIASAQQNMASQVERTLQPDPERVVRFQQLYE RYQQWCTHAEPCYTAEKH >gi|316919904|gb|ADCU01000006.1| GENE 60 67127 - 68629 1538 500 aa, chain + ## HITS:1 COG:YPO2253 KEGG:ns NR:ns ## COG: YPO2253 COG2160 # Protein_GI_number: 16122477 # Func_class: G Carbohydrate transport and metabolism # Function: L-arabinose isomerase # Organism: Yersinia pestis # 1 499 1 500 500 855 81.0 0 MQQFKQSEVWFVIGSQHLYGQRTLQQVKEQAEKVVSSLNQAGLPVKLVQKPLATTPDEIT SLCRDANYQDSCLGLLVWLHTFSPAKMWINGLRRLEKPLLQFHTQFNAQIPWDTMDMDFM NLNQTAHGGREFGFIGARMRQQHSVVAGHWEDPQALEGIARWMRVSAARHESQHLKVARF GDNMREVAVTEGDKVSAQIQFGYSVNGYALGDLEQVVNEVSHNDINTLVEEYETSYILTD AVKSGGAKRENLLDAARLELGIERFLQQGGFHAFTTTFENLYGLKQLPGLACQRLMQKGY GFGAEGDWKTAALLRIMKVMASGLKGGTSFMEDYTYNFQPGNDLVVGSHMLEVCPSIAKE EKPLLDVQHLGIGGKADPARLLFATPAGPALNASLIDMGDRFRLLVNCVDTVEQPRDLPK LPVARAIWKAQPSLATAAEAWILAGGAHHTVFTQALDVEYLRLYAEMHNIEFLLIDHATT LQTFKNEIRWNEMYYTLNRK >gi|316919904|gb|ADCU01000006.1| GENE 61 68982 - 69197 154 71 aa, chain + ## HITS:1 COG:no KEGG:Pecwa_2326 NR:ns ## KEGG: Pecwa_2326 # Name: not_defined # Def: OriC-binding nucleoid-associated protein # Organism: P.wasabiae # Pathway: not_defined # 1 70 1 70 71 121 84.0 7e-27 MTVTDYLLKFRRVSTLESLEKLFDHLNYSLTDDVEIINMYRAADHRRAELASGGRLYDVG CVPKEIWHYVQ >gi|316919904|gb|ADCU01000006.1| GENE 62 69442 - 70329 769 295 aa, chain + ## HITS:1 COG:STM1990 KEGG:ns NR:ns ## COG: STM1990 COG0697 # Protein_GI_number: 16765326 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Salmonella typhimurium LT2 # 4 293 2 291 306 350 73.0 1e-96 MRSRAATFLPLIGSLFALYIIWGSTYFVIRLGVESWPPLMMAGVRFLCAGLVMLTFLRLR GHKMPSGRPLLNAAVIGILLLAAGNGAVTVAEHQDVPSGIAAVMVATVPLFTLCFSRMYG MPTRWLEWLGIAIGLCGIILLNSGGHLSGNPWMALLILAGSMTWAFGSVWGSRVELPAGL MAGAVEMLTAGIVLLIASAIAGERMTQMPSLQGILAVSYLAIFGSLIAISAYMYLIRNVR PAVATSYAYVNPVVPVLLGTGLGGEMLSSTEWLALCVIIVAVLLVTLGKYLLPQN >gi|316919904|gb|ADCU01000006.1| GENE 63 70483 - 72219 1483 578 aa, chain + ## HITS:1 COG:VCA0614 KEGG:ns NR:ns ## COG: VCA0614 COG2759 # Protein_GI_number: 15601372 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Vibrio cholerae # 16 578 30 599 599 595 56.0 1e-169 MTSLSEQIHASSVPQLKPIAQIAQQLGIASAWLIPYGHYAAKIDIKAIKPEAGTGKLVLV SSITPTPLGEGKTVTTIGLSQGLNYIGRKAVACIRQPSLGPVFGVKGGAAGGGVAQVLPM EQLNLHLTGDIHAITAAHNLASAALDARLFHEQRLGEKFTEHTGLQRLDIDPERILWKRV IDHNDRALRSIDIGVGGGNNGVPRHDGFDITAASELMAILALSESLADMRQRIGQIILGY TLQGHAITTEDLEVAGAMAVLMKEAIHPTLMQTSENTPVLIHAGPFANIAHGNSSVLADR LALQLADYVVTEAGFGSDMGMEKFFNIKCRQSGIKPSCVVLVATLRSLKANSGKFNMKPG QSLPEEVKHPNLPLLTEGASNLGWHIGNAARYGLPVVVAINRFPEDSAEELDFIRKFAIE QGAFGVEISDAFSAGGKGTAQLAECVTAACRVSGEVTLLYPNEMSLADKLQTLVKKGYGA LRAELTPEAEAQLQQLQLAGFGHLPLCMAKTPLSISADPALKNVPQDFVVPVTDLKVSAG AGFIRVYAGNIMTMPGLSTLPAYRHIDIDESGNITGLN >gi|316919904|gb|ADCU01000006.1| GENE 64 72406 - 72837 439 143 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_2085 NR:ns ## KEGG: NT01EI_2085 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 143 1 143 143 142 65.0 5e-33 MNTKRIGGWLVAPLAYMIVSLLSSSLMMIIFVMMVLQPTSRSQLFSHSPVFSSQWTLSFV ITIAIWAFTLFNLYLFGKRSRRFPKFFVLWLLVMVLLAIRTFAFSPVTDAAAVRNMVIPL LAAAVFVPYIKRSRRVRDTFIEQ >gi|316919904|gb|ADCU01000006.1| GENE 65 73048 - 73629 620 193 aa, chain + ## HITS:1 COG:YPO2246 KEGG:ns NR:ns ## COG: YPO2246 COG4657 # Protein_GI_number: 16122474 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Yersinia pestis # 1 193 1 193 193 273 95.0 2e-73 MTDYLLLLVGTVLVNNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASVCAWAVN EFILVPLALEYLRTLTFILVIAVVVQFTELVVRKTSPALYRLLGIFLPLITTNCAVLGVA LLNVNQSHNFMQSAVYGFSAAAGFSLVMVLFAAIRERLAVADVPAPFRGSSIALITAGLM SLAFMGFTGLVKF >gi|316919904|gb|ADCU01000006.1| GENE 66 73629 - 74237 452 202 aa, chain + ## HITS:1 COG:YPO2245 KEGG:ns NR:ns ## COG: YPO2245 COG2878 # Protein_GI_number: 16122473 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Yersinia pestis # 1 186 1 186 188 298 80.0 5e-81 MSSLWIAIAAVGAIALVSGIVLGFAARRFKVDADPIVEQIDAILPQSQCGQCGYPGCRPY AEAISGSGENINKCAPGGEQVMLKIAELLAVDPQPLEGDAAQSEPVRQVALIDEENCIGC TKCIQACPVDAIVGATRAMHTVVSDLCTGCNLCVAPCPTDCITLVPVPTTTANWKWDLNT IPVRTITVNAISSHECEVEHHV >gi|316919904|gb|ADCU01000006.1| GENE 67 74230 - 76368 1675 712 aa, chain + ## HITS:1 COG:YPO2244 KEGG:ns NR:ns ## COG: YPO2244 COG4656 # Protein_GI_number: 16122472 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Yersinia pestis # 1 561 1 559 620 706 67.0 0 MFNLFAALKKDKLWDFKGGIHPPEMKHPSSHVPLRHVSLPPMLIIPLQQHIGQEGELLVK VGQHVMKGQPLTRGAGRNLPVHASTSGVISAISPQVTAHPSGLSEPCVTLIPDNQDRWGE LHPVANFQAESPLTLTHLIHQAGIAGLGGAGFPTGNKLEGGYGKVETLIINAAECEPYIT ADDRLMREHADEIILGCEILGHILTPKRTLIGIEDNKPEAIAALKKALKGHDDIKLRVIP TKYPSGGAKQLTKILTGMEVPFGKHSASIGVLMQNVGTVYAIKRAIINGEPLIERVVTLT GELMKKPGNVWARLGTPVKHLLQAGEFEAQNRTPMVIMGGPLMGFTLAHLSVPIVKISNC ILAPSKNEFDEAEEEQACIRCSQCADACPAGLLPQQLYWFSRGKEHEKARQHHLFDCIEC GACAYVCPSSIPLVQYYRQEKAEIKAADQEAARAAQAKERFEARQARLAREKAARELRHK QSAVNVSESDQSAVQAAVARVKQRQEQASGISSIHPFNNEQEDNSIRAAREARKALARER KQEIASDTTAVTVNTDVDPRKAAVAAALARVKAKKAAQDSQSSNIAAVAAVNDEAKNIVV PAEASSDPRKAAVAAAIARAKAKKAGLQDGGNQPEEKADAPTEVDPRKAAVAAAIARAKA KKAAQEADTNTVEPSTEDAATEQDPRKAAVAAAIARVKAKQAAQASAAVNED >gi|316919904|gb|ADCU01000006.1| GENE 68 76429 - 77421 865 330 aa, chain + ## HITS:1 COG:YPO2242 KEGG:ns NR:ns ## COG: YPO2242 COG4658 # Protein_GI_number: 16122470 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Yersinia pestis # 1 330 19 347 351 418 70.0 1e-117 MLWVIFACIPGIAAQAYFFGYGNLIQCALAIVTALLTEGLVLRLRQKNIAKTLGDNSALL TALLLGISLPPLAPWWMVVLGTAFAIIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMT TWLPPESLMTAPLDLNDTLMLIFSGHTADGAVIHQLIQTADGVSQATPLDSLKTGLRSGH SVVEILHQPIYQGEFAGLGWQWINAGFLLGGIILLLRGVIHWQIPVSFIVALAACSALGG YFTPHNAVPPMLELFSGATMLGAFFIATDPVTASTTPRGRLIFGGLIGALVWIIRTYGGY PDGVAFAVLLANITVPLIDHYTKPRAYGHR >gi|316919904|gb|ADCU01000006.1| GENE 69 77431 - 78066 615 211 aa, chain + ## HITS:1 COG:YPO2241 KEGG:ns NR:ns ## COG: YPO2241 COG4659 # Protein_GI_number: 16122469 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Yersinia pestis # 1 205 1 205 209 298 72.0 4e-81 MLSTMRRHGTTLALFAVLATGLTAVVNELTKDTIAHQAELQQKQLFDQVLPAEMYNNELQ HECYVVTDKRLGSTAPHHLYLARKDGVPVAAAVETTAPDGYSGAIQLLVAADFSGKVLGV RVLEHHETPGLGDKIDARISDWINRFRNQVVKGDNDPRWFVKKDGGMFDQFTGATITPRA VVNEVRHTVVFLQQNRDRLESMPRCPTSTGE >gi|316919904|gb|ADCU01000006.1| GENE 70 78069 - 78779 843 236 aa, chain + ## HITS:1 COG:YPO2240 KEGG:ns NR:ns ## COG: YPO2240 COG4660 # Protein_GI_number: 16122468 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Yersinia pestis # 1 215 1 215 233 346 89.0 3e-95 MSEAKTLLANGLWKNNSALVQLLGLCPLLAVSSTATNALGLGLATTLVLVFTNSAVSALR RWVPHEIRIPIYVMIIASVVSTVQMLINAYAYGLYQSLGIFIPLIVTNCIVIGRAEAYAA KNPVGLSAIDGLAMGLGATCALFVLGSLREILGNGTLFNGADLLLGSWAKSLRIEVFHTD TPFLLAMLPPGAFLGLGFLLALKYVIDQKMKARQALRQNMAAATTIRVEQNSEQAL >gi|316919904|gb|ADCU01000006.1| GENE 71 78776 - 79417 604 213 aa, chain + ## HITS:1 COG:YPO2239 KEGG:ns NR:ns ## COG: YPO2239 COG0177 # Protein_GI_number: 16122467 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Yersinia pestis # 1 212 1 212 213 394 88.0 1e-110 MNQEKRTLILQRLQENNPHPTTELAYSTHFELLIAVLLSAQATDVSVNKATALLYPVANT PAAMLELGVDGIKQYIKTIGLYNSKAENIIKTCRILLDEHHGEVPENRAALEALPGVGRK TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGKNVDEVEAKLLKVVPKEFKLDCHHWLI LHGRYTCIARKPRCGSCIIEDLCEFKEKVYPES >gi|316919904|gb|ADCU01000006.1| GENE 72 80044 - 81555 1522 503 aa, chain + ## HITS:1 COG:YPO2361 KEGG:ns NR:ns ## COG: YPO2361 COG3104 # Protein_GI_number: 16122585 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Yersinia pestis # 1 489 1 487 501 773 86.0 0 MSTANNNSNKADESVSLNAFKQPRAFYLIFSIELWERFGYYGLQGIMAVYLVKMLGMTEA DSITLFSSFSALVYGFVAIGGWLGDKVLGAKRVIVLGALVLAVGYALVAFSGHNITWVYA GMATIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSINIGSFFSMLATPWLAAQY GWNIAFSLSVVGMLITLVNFMMCRRWVKDHGSKPDFEPLAFKKLLMTLVGIVVLIGISYW LLHNQVVARWALAIISLGIVLVFAKETFALHGAARRKMIVAFLLMLEAVVFFVLYSQMPT SLNFFAIHNVEHSILGIAFEPEQYQALNPFWIMVASPILAAVYNKMGDRLPMPHKFAIGM VLCSGAFLVLPWGATFANEQGIMSVNWLILSYALQSIGELMISGLGLAMVAQLVPQRLMG FIMGSWFLTTAAAALIAGKVAALTAVPSDVPDAHASLAIYSHVFMQIGIVTAVIAVLMML TAPKLNRMTQSSDEETAREAATA >gi|316919904|gb|ADCU01000006.1| GENE 73 81780 - 82385 657 201 aa, chain + ## HITS:1 COG:YPO2367 KEGG:ns NR:ns ## COG: YPO2367 COG0625 # Protein_GI_number: 16122590 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Yersinia pestis # 1 201 1 201 201 315 75.0 4e-86 MKLFYKAGACSLSPHIVLREAGLDFTIERVDLATKKTEHGEDFLKINPKGQVPALLLDDG SLLTEGVAIVQYLADKVPDRNLIAPSGTLARYHAIEWLNYIATELHKGFSPLFNPKTPDE YKAIARQKLEQQFTYLNGVLSNQNYLLGARFSVADAYLFTVLGWAKALHFDLPAYPHIVN YVARIAARPAVDAALTAEGLK >gi|316919904|gb|ADCU01000006.1| GENE 74 82445 - 83335 214 296 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 1 244 1 243 305 87 25 3e-16 MFLRNLRALLSVVKHRNFTRASEEVCLSQPALSQKIKQLEEQLGVVLLDRSNRVIRPTDV GEVYLYHARRALNELEMGYRAIHDVQDLSRGSLRVGFTPTFSAYLIGPLFKRFYQLYPHI KLHLRELSQEQIEKDLLEGDIDLGVAFVSPESEHIRYQPLFTERLAVAVGENSSLYHQTM MTLDEIATAPMVLLSQDFATRCYIDRYFNQHQLQPNLAIEANSISTILDLVKNSELVSIL PQAIIEKQSKIHAIELMPILPERIAALLQHKTHYTNAASQAFKALIDAEFTQVVFE >gi|316919904|gb|ADCU01000006.1| GENE 75 83443 - 84105 443 220 aa, chain + ## HITS:1 COG:PA2053 KEGG:ns NR:ns ## COG: PA2053 COG0288 # Protein_GI_number: 15597249 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Pseudomonas aeruginosa # 1 206 1 206 220 288 65.0 8e-78 MQNIIEGFLKFQQECFPQRTELFKDLANKQSPSVLFITCSDSRVVPEFLTQQEPGNLFVI RNAGNLVPSYSPEVGGVSASVEYAVAALGVTDIVICGHSDCGAMTAINQGICLDHMPMVA KWLKHADAAKLVNASRFYASEAESLNGMVQANVVAQLSNLKTHPSVAVAIEQGRLNLHGW VYDIENGAMLTLEGESQKFVSLTEKPYACALASHHTANAA >gi|316919904|gb|ADCU01000006.1| GENE 76 84131 - 84601 530 156 aa, chain + ## HITS:1 COG:PA2052 KEGG:ns NR:ns ## COG: PA2052 COG1513 # Protein_GI_number: 15597248 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate lyase # Organism: Pseudomonas aeruginosa # 1 156 1 156 156 231 75.0 4e-61 MTQTLTTQTARVALTETIVMAKIAKNLSWQDLADGTDMNIAFVTAALLGQHALPECAAQK IVKQLELAPEAALLLQAIPLRGSIPQGIPTDPTIYRFYEMLQVYGTTLKALVHEQFGDGI ISAINFKMDIKKVEDPEGGSRAVITFDGKYLPTKPF >gi|316919904|gb|ADCU01000006.1| GENE 77 84659 - 85519 839 286 aa, chain - ## HITS:1 COG:YPO2368 KEGG:ns NR:ns ## COG: YPO2368 COG2240 # Protein_GI_number: 16122591 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Yersinia pestis # 1 286 1 286 286 491 81.0 1e-139 MKNILSIQSHVVFGHAGNSAAVFPMRRMGVNVWPLNTVQFSNHTQYGHWTGCVMPANHLT EIVQGIADIDQLKNCDAVLSGYIGSPEQGGHILDIVRKVKAANPNAWYFCDPVMGHPEKG CIVAPGVAEFFARDAVASSDIMAPNLLELEQLTGHTINSVEEALASARSVIARGPKVVLV KHLAYAGYHKDRFEMILVTADEAWHISRPLVDFGERQPVGVGDLTSGLLLVNMLKGEPLK KALEHVTAAVYEVMLTTKEMGEYELQVVAAQDRIAQPVHQFAAVEL >gi|316919904|gb|ADCU01000006.1| GENE 78 85753 - 87027 786 424 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 4 421 7 414 418 307 41 1e-82 MASSNLIKQLQERGLIAQVTDEEALAERLAQGPLALYCGFDPTADSLHLGHLVPLLCLKR FQLEGHKPVALVGGATGLIGDPSFKATERKLNTQDTVHEWVDKIRHQVAPFLDFDCGENS AIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNRDDVGISFTEFSYNLLQG YDFASLNELHGVELQIGGSDQWGNITSGIDLTRRLHQKQVWGLTVPLITKADGTKFGKTE GGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMDLKDIDALEEEDKNSGKAPRAQ YVLAELVTRMVHGEEGLAAAKRITQSLFSGALSEMTEADFAQLAQDGMPMVELERDADLQ QALVDSELQPSRGQARKTIASNAITINGEKQSDPEYTFSDADRLFGRFTLLRRGKKNYCL ICWK >gi|316919904|gb|ADCU01000006.1| GENE 79 87157 - 87810 532 217 aa, chain - ## HITS:1 COG:YPO2370 KEGG:ns NR:ns ## COG: YPO2370 COG0259 # Protein_GI_number: 16122593 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxamine-phosphate oxidase # Organism: Yersinia pestis # 1 217 1 217 217 378 82.0 1e-105 MSENNEFDVADLRREYVRGGLRRSDLTDDPLEMFERWLKQACDARLADPTAMCVATVDKH GQPYQRIVLLKHFDQQGMVFYTNLGSRKAQQLEENPHISLHFPWHMLDRQVSVLGTVEKL STLEVMKYFHSRPKDSQIAAWVSRQSSRISTRGILEGKFLELKQKFLQGEIPLPSFWGGY RVKINSMEFWQGRENRLHDRFIYQRHGDAWEIDRLAP >gi|316919904|gb|ADCU01000006.1| GENE 80 88109 - 88420 229 103 aa, chain - ## HITS:1 COG:YPO2371 KEGG:ns NR:ns ## COG: YPO2371 COG3895 # Protein_GI_number: 16122594 # Func_class: R General function prediction only # Function: Predicted periplasmic protein # Organism: Yersinia pestis # 3 101 2 102 104 125 63.0 1e-29 MFKYTCAAAAILLLAGCQSMHKKEVAPEQFSYQCGTTPLTVTVDNQKDQVSFIMDGNQLT LPHVVSASGARYSDGKYTFWSKGNTAFVERNEQIIIDNCVLKS >gi|316919904|gb|ADCU01000006.1| GENE 81 88448 - 89563 1000 371 aa, chain - ## HITS:1 COG:YPO2372 KEGG:ns NR:ns ## COG: YPO2372 COG2377 # Protein_GI_number: 16122595 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted molecular chaperone distantly related to HSP70-fold metalloproteases # Organism: Yersinia pestis # 1 368 1 368 370 568 74.0 1e-162 MRSGRYIGVMSGTSLDGIDVVIAAIDERMVAQQSRYSHPIPIAVKKAILGMCQGQAVTLA QVGELDRQMGSLYAEAINHLLAKSSLSAQDITAIGCHGQTVWHQPEGDEPFTMQIGDNNR VAALTGITTVGDFRRRDMAYGGQGAPLVPAFHHALLTHPVERRMVLNIGGIANLSLLLPG LPVRGFDTGPGNMLMDAWIWRNHAKAYDKDAEWAMQGTVNQALLQQLLAEPYFARPAPKS TGRELFNLGWLEHQLSLQPALPAVDVQATLAELTAISICDQVQLAGGCERLLVCGGGARN PLLMSRMAALLSGTEVCSTDAYGVSGDDMEALAFAWLAYRTLSGLPGNLPSVTGASQETV LGAIYPANHII >gi|316919904|gb|ADCU01000006.1| GENE 82 89919 - 90389 539 156 aa, chain + ## HITS:1 COG:YPO2373 KEGG:ns NR:ns ## COG: YPO2373 COG3133 # Protein_GI_number: 16122596 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein # Organism: Yersinia pestis # 1 153 1 153 155 149 69.0 1e-36 MIKRLIVIALAGATLAGCANTSTLSGDVYTAGQAKEVQQVTYGSIVSIQPVRIQAGNDSN VIGSIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGLAGNSIEGAVNRTDGVQLVIRKDD GKTIAVVQKNGNKPFSVGQRVMLLSSGSSVSVSATN >gi|316919904|gb|ADCU01000006.1| GENE 83 90478 - 90909 355 143 aa, chain - ## HITS:1 COG:YPO2374 KEGG:ns NR:ns ## COG: YPO2374 COG1846 # Protein_GI_number: 16122597 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 143 1 143 143 213 81.0 1e-55 MESTLGSDLARLVRVWRALIDQRLKPLELTQTHWVTLYNINRLPPDQSQIQLAKAIGIEQ PSLVRTLDQLEEKGLITRHTCANDRRAKRIKLTEEAAPIIKEVNDVITITRGEILSGVSP EEVTLLTNLIERLEQNIIHLQNK >gi|316919904|gb|ADCU01000006.1| GENE 84 91085 - 91321 141 78 aa, chain + ## HITS:1 COG:no KEGG:YE2145 NR:ns ## KEGG: YE2145 # Name: not_defined # Def: putative inner membrane protein # Organism: Y.enterocolitica # Pathway: not_defined # 7 78 7 78 78 89 72.0 4e-17 MDIISSSQGSPLQDLILGASLYFPPIFKAVLLGIVFWLLIHRIFRDTIYSGDIWHPTLMD LSIFVICVSASLWLLTSW >gi|316919904|gb|ADCU01000006.1| GENE 85 91328 - 91903 319 191 aa, chain + ## HITS:1 COG:ydhJ KEGG:ns NR:ns ## COG: ydhJ COG1566 # Protein_GI_number: 16129602 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 165 15 179 299 216 61.0 3e-56 MKLNTLRYFSTVIVCAIAITAGWWAWNYYMQSPWTRDGKVRAELVNITPEVSGKIINVNI NDNQQVKQGDLLFSLDPTPFEIALSNANAAMAKAESDLAKATHEAARRGNLPRNVISAED LDEANLNAQAMKANYKSAQSNLEQAKWNLQHTNIYAPVSGFITNLGNDSNLLIVFYVQIM PDDFVMQLHRF >gi|316919904|gb|ADCU01000006.1| GENE 86 91838 - 92104 147 88 aa, chain - ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 88 80 167 167 171 100.0 3e-43 MATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARL GRKSLSFSKSVELHDKVIGHYLNIKHYQ Prediction of potential genes in microbial genomes Time: Wed May 18 14:55:14 2011 Seq name: gi|316919811|gb|ADCU01000007.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.7, whole genome shotgun sequence Length of sequence - 100879 bp Number of predicted genes - 96, with homology - 88 Number of transcription units - 71, operones - 18 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 143 - 358 68 ## SbBS512_E3230 putative IS1 encoded protein + Prom 408 - 467 4.0 2 2 Op 1 6/0.095 + CDS 530 - 820 194 ## COG1566 Multidrug resistance efflux pump 3 2 Op 2 . + CDS 833 - 2860 1097 ## COG1289 Predicted membrane protein + Term 2928 - 2983 0.1 4 3 Op 1 . - CDS 2857 - 3096 87 ## COG3313 Predicted Fe-S protein 5 3 Op 2 . - CDS 3170 - 4054 386 ## COG0583 Transcriptional regulator - Prom 4112 - 4171 4.1 + Prom 4064 - 4123 4.3 6 4 Tu 1 . + CDS 4192 - 4833 772 ## COG2910 Putative NADH-flavin reductase + Term 4857 - 4901 9.2 + Prom 4889 - 4948 3.0 7 5 Tu 1 . + CDS 5085 - 6182 957 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 6222 - 6264 2.2 + Prom 6277 - 6336 4.1 8 6 Tu 1 . + CDS 6377 - 6784 200 ## PROTEIN SUPPORTED gi|15900839|ref|NP_345443.1| lactoylglutathione lyase + Term 6832 - 6867 5.6 + Prom 6874 - 6933 1.8 9 7 Tu 1 . + CDS 6959 - 7615 555 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Term 7625 - 7654 1.2 + Prom 7704 - 7763 4.2 10 8 Tu 1 . + CDS 7784 - 9106 1031 ## COG2056 Predicted permease + Term 9123 - 9158 7.4 - Term 9111 - 9146 7.4 11 9 Tu 1 . - CDS 9168 - 9515 450 ## COG0278 Glutaredoxin-related protein - Prom 9663 - 9722 4.2 + Prom 9784 - 9843 1.9 12 10 Tu 1 . + CDS 9880 - 10851 177 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 + Term 10865 - 10910 4.7 + Prom 10977 - 11036 4.8 13 11 Tu 1 . + CDS 11173 - 11751 431 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 11773 - 11810 7.1 + Prom 12058 - 12117 5.3 14 12 Op 1 . + CDS 12289 - 13314 1004 ## COG1609 Transcriptional regulators 15 12 Op 2 3/0.333 + CDS 13318 - 14967 708 ## COG4135 ABC-type uncharacterized transport system, permease component 16 12 Op 3 . + CDS 14964 - 15590 186 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Term 15357 - 15393 1.4 17 13 Tu 1 . - CDS 15592 - 16500 733 ## COG0583 Transcriptional regulator - Prom 16613 - 16672 3.7 + Prom 16539 - 16598 5.3 18 14 Tu 1 . + CDS 16641 - 17867 1140 ## COG0477 Permeases of the major facilitator superfamily + Term 17999 - 18031 3.1 + Prom 17896 - 17955 8.2 19 15 Tu 1 . + CDS 18187 - 19338 938 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases + Term 19357 - 19394 7.1 - Term 19343 - 19380 7.1 20 16 Tu 1 . - CDS 19400 - 20281 960 ## COG0501 Zn-dependent protease with chaperone function - Prom 20385 - 20444 5.9 - Term 20459 - 20486 0.1 21 17 Op 1 7/0.095 - CDS 20510 - 22513 1956 ## COG0793 Periplasmic protease 22 17 Op 2 4/0.190 - CDS 22560 - 23267 709 ## COG3109 Activator of osmoprotectant transporter ProP 23 18 Tu 1 . - CDS 23369 - 23860 333 ## PROTEIN SUPPORTED gi|15900747|ref|NP_345351.1| hypothetical protein SP_0864 + Prom 24066 - 24125 6.5 24 19 Op 1 11/0.048 + CDS 24348 - 25439 718 ## COG2995 Uncharacterized paraquat-inducible protein A 25 19 Op 2 . + CDS 25402 - 28038 2311 ## COG3008 Paraquat-inducible protein B + Term 28048 - 28081 5.1 + Prom 28504 - 28563 7.6 26 20 Tu 1 . + CDS 28784 - 29680 514 ## Aasi_1217 hypothetical protein + Prom 29686 - 29745 2.8 27 21 Tu 1 . + CDS 29946 - 30494 203 ## ECL_01982 putative acetyltransferase + Term 30655 - 30695 -0.6 - Term 30628 - 30687 1.8 28 22 Tu 1 . - CDS 30820 - 31161 269 ## ROD_16821 hypothetical protein - Prom 31194 - 31253 5.5 29 23 Tu 1 . - CDS 31303 - 32724 480 ## ROD_34541 hypothetical protein - Prom 32823 - 32882 4.7 + Prom 33343 - 33402 5.1 30 24 Op 1 . + CDS 33425 - 33739 255 ## 31 24 Op 2 . + CDS 33718 - 33870 73 ## - Term 34061 - 34094 -0.2 32 25 Tu 1 . - CDS 34178 - 35110 624 ## COG2837 Predicted iron-dependent peroxidase 33 26 Tu 1 . + CDS 35725 - 36888 1106 ## COG3203 Outer membrane protein (porin) + Term 36903 - 36952 9.4 - Term 36891 - 36940 11.0 34 27 Tu 1 . - CDS 36948 - 37415 400 ## NT01EI_1882 lipoprotein, putative - Prom 37439 - 37498 7.0 - Term 37513 - 37538 -0.5 35 28 Tu 1 . - CDS 37565 - 38002 456 ## COG1652 Uncharacterized protein containing LysM domain - Prom 38099 - 38158 3.2 - Term 38410 - 38436 -1.0 36 29 Tu 1 . - CDS 38455 - 39651 783 ## COG0477 Permeases of the major facilitator superfamily - Prom 39812 - 39871 5.0 - Term 39856 - 39886 3.0 37 30 Tu 1 . - CDS 39921 - 40259 348 ## PC1_1899 DNA-binding transcriptional activator OsmE - Prom 40460 - 40519 4.9 + Prom 40404 - 40463 5.4 38 31 Tu 1 . + CDS 40508 - 40903 179 ## PROTEIN SUPPORTED gi|189023670|ref|YP_001934438.1| Ribosomal protein P2 39 32 Tu 1 . - CDS 41175 - 41519 164 ## - Prom 41631 - 41690 3.5 - Term 41640 - 41695 9.8 40 33 Tu 1 . - CDS 41706 - 42008 203 ## - Prom 42134 - 42193 8.5 + Prom 42098 - 42157 6.0 41 34 Op 1 . + CDS 42348 - 42575 107 ## ESA_01424 hypothetical protein 42 34 Op 2 . + CDS 42667 - 42828 112 ## - Term 42817 - 42862 0.4 43 35 Tu 1 . - CDS 42871 - 43827 767 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) - Prom 44039 - 44098 3.5 + Prom 43979 - 44038 5.4 44 36 Tu 1 . + CDS 44116 - 44376 170 ## ETAE_1823 hypothetical protein + Term 44439 - 44472 3.7 - Term 44425 - 44460 4.1 45 37 Op 1 . - CDS 44486 - 44839 345 ## Dd586_2169 protein of unknown function DUF2511 46 37 Op 2 8/0.048 - CDS 44885 - 45769 576 ## COG1276 Putative copper export protein 47 37 Op 3 . - CDS 45778 - 46155 352 ## COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC - Prom 46398 - 46457 6.9 + Prom 47427 - 47486 8.8 48 38 Tu 1 . + CDS 47668 - 48780 1323 ## COG3203 Outer membrane protein (porin) + Term 48822 - 48849 1.5 - Term 48810 - 48837 1.5 49 39 Op 1 2/0.381 - CDS 48899 - 49702 623 ## PROTEIN SUPPORTED gi|163802692|ref|ZP_02196583.1| 30S ribosomal protein S21 - Prom 49722 - 49781 3.1 - Term 49732 - 49782 4.0 50 39 Op 2 . - CDS 49791 - 51839 1665 ## COG1770 Protease II 51 40 Tu 1 . - CDS 51978 - 52865 600 ## COG2200 FOG: EAL domain - Prom 52943 - 53002 5.2 + Prom 52694 - 52753 6.0 52 41 Tu 1 . + CDS 52823 - 52978 57 ## - Term 53434 - 53477 8.0 53 42 Op 1 . - CDS 53497 - 53856 350 ## Spro_2801 hypothetical protein 54 42 Op 2 1/0.571 - CDS 53953 - 54261 268 ## COG3097 Uncharacterized protein conserved in bacteria 55 42 Op 3 . - CDS 54301 - 54606 288 ## COG3141 Uncharacterized protein conserved in bacteria - Prom 54631 - 54690 7.0 56 43 Op 1 . - CDS 54704 - 55213 287 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 55227 - 55274 6.1 57 43 Op 2 . - CDS 55292 - 55501 265 ## COG1278 Cold shock proteins - Prom 55535 - 55594 3.3 - Term 56128 - 56173 10.4 58 44 Tu 1 . - CDS 56191 - 57342 1061 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases - Prom 57463 - 57522 7.5 + Prom 57680 - 57739 4.1 59 45 Tu 1 . + CDS 57770 - 58948 994 ## COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) + Term 58957 - 58990 4.4 - Term 58943 - 58978 4.8 60 46 Tu 1 . - CDS 58992 - 59174 265 ## COG3140 Uncharacterized protein conserved in bacteria - Prom 59402 - 59461 5.4 + Prom 59247 - 59306 4.5 61 47 Op 1 6/0.095 + CDS 59360 - 60751 1061 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 62 47 Op 2 5/0.143 + CDS 60748 - 61320 368 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 61762 - 61821 6.5 63 48 Tu 1 . + CDS 62010 - 63374 1380 ## COG1760 L-serine deaminase - Term 63315 - 63342 -0.8 64 49 Tu 1 . - CDS 63466 - 64347 519 ## Ent638_2980 hypothetical protein - Prom 64409 - 64468 3.5 + Prom 64336 - 64395 2.5 65 50 Op 1 . + CDS 64525 - 65805 1132 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 66 50 Op 2 . + CDS 65841 - 66806 801 ## COG1446 Asparaginase 67 50 Op 3 . + CDS 66799 - 68274 997 ## COG0260 Leucyl aminopeptidase 68 50 Op 4 8/0.048 + CDS 68276 - 68587 408 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 69 50 Op 5 . + CDS 68589 - 68900 330 ## COG1447 Phosphotransferase system cellobiose-specific component IIA + Term 68910 - 68945 5.1 + Prom 68946 - 69005 8.1 70 51 Tu 1 . + CDS 69233 - 70804 1024 ## COG2200 FOG: EAL domain + Term 70814 - 70853 5.7 71 52 Tu 1 . - CDS 70865 - 72424 1416 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Prom 72819 - 72878 8.4 72 53 Op 1 13/0.048 + CDS 73114 - 74073 982 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB + Term 74074 - 74115 4.1 73 53 Op 2 13/0.048 + CDS 74139 - 74936 949 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 74 53 Op 3 4/0.190 + CDS 74952 - 75815 846 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Term 75820 - 75872 12.2 75 54 Tu 1 4/0.190 + CDS 75879 - 76337 413 ## COG4811 Predicted membrane protein + Term 76363 - 76408 2.2 76 55 Tu 1 . + CDS 76734 - 77306 593 ## COG1971 Predicted membrane protein + Term 77311 - 77361 6.6 77 56 Tu 1 . - CDS 77358 - 78170 470 ## COG0500 SAM-dependent methyltransferases - Prom 78197 - 78256 3.9 + Prom 78124 - 78183 2.5 78 57 Tu 1 . + CDS 78341 - 79048 386 ## COG1496 Uncharacterized conserved protein + Term 79081 - 79107 -0.7 - Term 79069 - 79095 -0.7 79 58 Tu 1 . - CDS 79117 - 79326 253 ## COG1278 Cold shock proteins + Prom 80080 - 80139 8.0 80 59 Tu 1 . + CDS 80238 - 80843 478 ## plu2784 palmitoyl transferase + Term 80880 - 80906 1.0 - Term 80865 - 80897 4.0 81 60 Tu 1 . - CDS 80914 - 81888 909 ## COG0583 Transcriptional regulator - Prom 82066 - 82125 7.0 - Term 82254 - 82285 4.1 82 61 Tu 1 . - CDS 82320 - 84917 2454 ## COG0550 Topoisomerase IA - Prom 85128 - 85187 3.5 + Prom 85255 - 85314 3.1 83 62 Tu 1 . + CDS 85353 - 85604 317 ## ETAE_1551 hypothetical protein + Term 85636 - 85665 -0.9 - Term 85623 - 85652 -0.9 84 63 Tu 1 . - CDS 85684 - 86688 842 ## COG0616 Periplasmic serine proteases (ClpP class) + Prom 86917 - 86976 3.8 85 64 Op 1 5/0.143 + CDS 87017 - 87778 613 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 86 64 Op 2 . + CDS 87848 - 88438 514 ## COG2109 ATP:corrinoid adenosyltransferase + Term 88446 - 88487 4.5 - Term 88220 - 88248 -0.1 87 65 Op 1 6/0.095 - CDS 88492 - 89094 484 ## COG0406 Fructose-2,6-bisphosphatase 88 65 Op 2 . - CDS 89131 - 89868 877 ## COG0368 Cobalamin-5-phosphate synthase - Prom 89926 - 89985 6.1 - Term 89959 - 90000 8.7 89 66 Op 1 . - CDS 90029 - 90982 1000 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 91052 - 91111 6.8 - Term 91073 - 91101 -0.9 90 66 Op 2 . - CDS 91143 - 91301 114 ## - Prom 91395 - 91454 5.2 + Prom 91425 - 91484 5.5 91 67 Tu 1 . + CDS 91668 - 94922 1525 ## COG3468 Type V secretory pathway, adhesin AidA + Term 94935 - 94979 9.2 92 68 Tu 1 . - CDS 94982 - 95413 165 ## - Prom 95617 - 95676 2.2 93 69 Tu 1 . - CDS 95690 - 96526 205 ## COG0322 Nuclease subunit of the excinuclease complex - Prom 96709 - 96768 3.4 94 70 Tu 1 . + CDS 96920 - 97222 252 ## NT01EI_1701 hypothetical protein + Term 97282 - 97317 1.3 - Term 97460 - 97493 3.8 95 71 Op 1 . - CDS 97509 - 100448 2543 ## COG3468 Type V secretory pathway, adhesin AidA 96 71 Op 2 . - CDS 100450 - 100716 147 ## COG1662 Transposase and inactivated derivatives, IS1 family Predicted protein(s) >gi|316919811|gb|ADCU01000007.1| GENE 1 143 - 358 68 71 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E3230 NR:ns ## KEGG: SbBS512_E3230 # Name: not_defined # Def: putative IS1 encoded protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 35 71 1 37 37 65 97.0 8e-10 MAENRVEANAHNAGGCPASNAIHGHINDFLVRTGLRSGVSELQLPCFTAVRAEIALMSGS AFAVTHHPVSS >gi|316919811|gb|ADCU01000007.1| GENE 2 530 - 820 194 96 aa, chain + ## HITS:1 COG:STM1442 KEGG:ns NR:ns ## COG: STM1442 COG1566 # Protein_GI_number: 16764790 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Salmonella typhimurium LT2 # 1 93 203 295 298 129 61.0 1e-30 MGYFEETKLKHIHIGNNVDITLYNGNIPLHGSVESIGRAIYDQSVDSSDNMLLNVKPNVP WVRLAQRVPIRIKLENVPKDVLLVAGTTCTITVRAN >gi|316919811|gb|ADCU01000007.1| GENE 3 833 - 2860 1097 675 aa, chain + ## HITS:1 COG:STM1441 KEGG:ns NR:ns ## COG: STM1441 COG1289 # Protein_GI_number: 16764789 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 662 1 662 679 795 59.0 0 MNISWLDWRNTPWAKANAGQWRYALRNAIAMCLALWVAFLLDLDEPYWAFTSAAVVSFPT VGGVISKSIGRIAGSLLGAAASVLIAGQCLNDPWLFTLFIAAWIAICTYVSNHYQNNVAY AFALAGYTAAIIAFSTAESTDTMQIFDIAQARVCEVITGLLCGAFMMMILPSTSDGTNLL TSLRRMHQRLLEHATMLWHPETTPEMRASHEGLIGQILTMNILRIQAFWSNHRLRSRNNV LNFLLHQQLRLTSVISSIRRMLVNWPDRPEFLQDVLQAIIKELQNPETNKYRLAKILSRI YPHDPSDYRLRSFYLRLRYFCWLYLQGSRWIRHVEKSSPEETFSPPKVHSIARHTDSMES AYNALRTFIALVVGCAFWMNTQWDAGSAALTITAITCVLYSTSASPMTSLTTLFKAMVLL SIGCYLAKFGLMIQIDDFWVFCAFLLPVLLTMQLLKLQNPKTAALWGQLIVFMGSFLLVT NPPEYDYGSFVNENIAKICGVLLAAVAFQILRPSSDKRKSRRIIQALRRDFIDQISRRPQ QSESQFESRIYHRISQLNQSKDELSRIWVLRWGVVLLNCSHIVWQLRDWQTRSDPLSAVR DVCIHCLKGIMTEKGIQHDSLDKTLNELLRISDVLSHHPDQSGRDLAGLVWRLYCSLSQL QQKVVTSASNKSIKS >gi|316919811|gb|ADCU01000007.1| GENE 4 2857 - 3096 87 79 aa, chain - ## HITS:1 COG:ECs2358 KEGG:ns NR:ns ## COG: ECs2358 COG3313 # Protein_GI_number: 15831611 # Func_class: R General function prediction only # Function: Predicted Fe-S protein # Organism: Escherichia coli O157:H7 # 1 79 47 125 125 114 69.0 3e-26 MAQQLEFFEIPSPCRGICQSDERGYCRGCMRSRDERFNWIKLSDPQKRDVLRLCRQRWLR QQRNDKSDPSHQPEQPSLF >gi|316919811|gb|ADCU01000007.1| GENE 5 3170 - 4054 386 294 aa, chain - ## HITS:1 COG:PA0123 KEGG:ns NR:ns ## COG: PA0123 COG0583 # Protein_GI_number: 15595321 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 288 7 293 302 211 44.0 2e-54 MAVFAVVVAEGSFSAAGRRLGMSPSAVSQHMRTLEQELRVTLLHRSTRKLTLTDAGAAFY PGCKAMLHEASQAEQRLAEMRDTLVGELRIATTIGLGGAPLAQALAPLLQAHPKLSLRIL ANDEIINLIEVRADIALRVNRQLDDASYIAHPLAVWPMVLCASPRYLNRCGIPETPDELS QHQWLVNTNEAVPASIELHRNNGETRKISLPDIATGSSSMNVLRAFTLEGIGISIQPLYE IEYELKRGDLVLLLPEWRPAPLKLHALTLERVHTEKSRQAMQCLRDYFQNYQQR >gi|316919811|gb|ADCU01000007.1| GENE 6 4192 - 4833 772 213 aa, chain + ## HITS:1 COG:PA0741 KEGG:ns NR:ns ## COG: PA0741 COG2910 # Protein_GI_number: 15595938 # Func_class: R General function prediction only # Function: Putative NADH-flavin reductase # Organism: Pseudomonas aeruginosa # 1 213 1 213 213 196 48.0 3e-50 MKLAIIGATGFVGRVVVDEALARGHEVTAIARSQKDLPDVDRLHIALGDVTNVDWLTQTL KGVDAVISAFNPGWTDPDLYANFVKGSDAILTAVEKSGVKRFLVVGGAGSLEVAPGVELI DTPQFPAEIRPGAQGARELRNKLRAGSELDWTVLCPAAMLEPGKRTGHFRLGTTSLLMNG DAPANISVQDLAVAILNEIEQPQFIKRQFTAAY >gi|316919811|gb|ADCU01000007.1| GENE 7 5085 - 6182 957 365 aa, chain + ## HITS:1 COG:YPO2379 KEGG:ns NR:ns ## COG: YPO2379 COG1902 # Protein_GI_number: 16122602 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Yersinia pestis # 1 365 1 365 365 599 80.0 1e-171 MKIEKLFTPVTVGDVTLPNRVFMAPLTRLRSKEPGDIPTPLMGEYYNQRAGAGLIITEAT QVSFQAKGYAGAPGLHTPEQLDAWKKIVAGVHQHGGHIAVQLWHVGRISHNSLQPNNQPP VAPSAIAADTRTTVRDENGHWVRVPCSEPRALETSEIPGIVNDFRHAVALANKAGFDLVE LHAAHGYLLHQFMSPASNQRTDQYGGSIENRARLTLEVVDAAIAESGAGRVGIRISPLGP FNGLDNGEDQEEAALYLIGQLNQRKIAYLHISEPDWAGGKPYSEAFRQAVRENFSGIIIG SGGYNAEKAETLINQGLIDAVAFGRNFIANPDLVERLEKKASLNTPQPETFYGGGAEGYT DYPTL >gi|316919811|gb|ADCU01000007.1| GENE 8 6377 - 6784 200 135 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900839|ref|NP_345443.1| lactoylglutathione lyase [Streptococcus pneumoniae TIGR4] # 2 127 4 126 126 81 36 1e-14 MRLLHTMLRVGHLQRSIDFYTKVLGMRLLRTSENEEYKYSLAFVGYSDESTGSVIELTYN WGVESYEMGTAFGHIALGVDDVAATCESIRQAGGKVTREAGPVKGGNTIIAFVEDPDGYK IELIENKQAGAGLGN >gi|316919811|gb|ADCU01000007.1| GENE 9 6959 - 7615 555 218 aa, chain + ## HITS:1 COG:YPO2382 KEGG:ns NR:ns ## COG: YPO2382 COG0847 # Protein_GI_number: 16122605 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Yersinia pestis # 1 211 1 211 215 359 82.0 3e-99 MAETTNLNTLSARFRGFYPVVIDVETAGFDANTNALLEIAAVTLRMTDDGWLEPDETLHF HVEPFVGSVLVPEALAFNGIDPENPLRGAVSEYEALHAIFKAVRKGIKEHDCNRAVIVAH NAHFDHSFVMAAAERVGLKRNPFHPFATFDTAALSGLVLGQTVLAKACIAANIPFDSTQA HSALYDTEQTATLFCELVNRWKRMGGWPLPANAEESAE >gi|316919811|gb|ADCU01000007.1| GENE 10 7784 - 9106 1031 440 aa, chain + ## HITS:1 COG:VC1005 KEGG:ns NR:ns ## COG: VC1005 COG2056 # Protein_GI_number: 15641020 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Vibrio cholerae # 1 440 1 441 441 526 70.0 1e-149 MNAVVVAVTVMLLLSLMRVNVVIALIFAAITGGLVGGLTLETTLTTFSGGLGGGAEIALS YAMLGTFAVAISRSGITDILAQKVIARMGHQPSASKLFWFKYGLLLIISLIAISSQNLIP IHIAFIPILIPPLLHVFSRMNLDRRAVACVLTFGLITPYMVLPIGFGGIFLNNILLKNLN GNGLNVTASQVPHAMLLPGLGMIVGLLIAVFFSYRKPRRYSERKILAAEPEHKSVKTRHL WVAGLAILAALGVQLATNSIVLGALVGFMVFIAGGVIHWKETQDVFTRGVHMMAMIGFIM ITASGFAAVIKATGSVETLVVSIESVIGNNRGLAAFLMLFVGLIITMGIGSSFSTVPIIA AIYVPLCIAFGFSPMATIAIVGVAGALGDAGSPASDSTLGPTSGLNMDGQHDHIWDSVVP TFLHYNLPLLAFGWIAAMTL >gi|316919811|gb|ADCU01000007.1| GENE 11 9168 - 9515 450 115 aa, chain - ## HITS:1 COG:STM1433 KEGG:ns NR:ns ## COG: STM1433 COG0278 # Protein_GI_number: 16764781 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin-related protein # Organism: Salmonella typhimurium LT2 # 4 112 3 111 115 199 91.0 8e-52 MTMTTIEKIQRQLAENPIILYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQNPDIR AELPKYANWPTFPQLWVEGELVGGCDIIIEMYRAGELQQLIKETAAKHPAQEEQQ >gi|316919811|gb|ADCU01000007.1| GENE 12 9880 - 10851 177 323 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 190 316 57 174 175 72 35 6e-12 MRLYIALFVLLFTQLFANAANASPGHKVVADQRKSHTTSSEAADRKKRKPAASKKEKTPT TSTAKNKKSSDKTVASKKQNAKKESASQNSALASKFARNREVARNKANSKKIDKAVLASL SKPNKKSAEKKASARTATLAHVSNKKSYGRQRGKLNSKNELAKLALNQNNVEIVDGKPIR LSPQHKKRYQNAKQTAMNKLMNQVGKPYRWGGSSPSTGFDCSGLVYYAYQDLLSIKIPRT ANEMYHLRDAAPVKKTELQKGDLVFFRINNRGAADHVGVYMGEGKFIQSPRTGEQIRISY LDNDYWQGHYVGARRVMTPKTIR >gi|316919811|gb|ADCU01000007.1| GENE 13 11173 - 11751 431 192 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 187 1 193 201 170 41 2e-41 MSFELPALPYEKNALEPHISAETLEYHYGKHHNTYVVNLNNLIKGTEFEGKSLEEIIKTS TGGIFNNAAQVWNHTFYWHCLSPKGGNAPTGAVADAINKAFGSFEAFKEELTKSAVGNFG SGWTWLVKKADGSLAIVNTSNAATPLTSGDKPLLTVDVWEHAYYIDYRNARPKYLENFWA LVNWEFVAKNLA >gi|316919811|gb|ADCU01000007.1| GENE 14 12289 - 13314 1004 341 aa, chain + ## HITS:1 COG:YPO2387 KEGG:ns NR:ns ## COG: YPO2387 COG1609 # Protein_GI_number: 16122610 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 341 1 341 341 639 90.0 0 MATIKDVAKRAGVSTTTVSHVINKTRFVAEETKAAVWEAIKELHYSPSAVARSLKVNHTK SIGLLATSSEAPYFAEVIEAVENACYSQGYTLILCNSHNNPEKQKAYLAMLAQKRVDGLL VMCSEYPENLLQTLEDYRNIPMVVMDWGTQRSDFTDAIQDNAFEGGYLAGRYLIERGHRD IGAITGQLSRNTGGGRLRGFLKALQEANIPTRDEWMVEGDFEPESGYKAMHQILSQKHRP TAVFVGGDIMAMGAICAADEMGLRVPQDISVIGYDNVRNARYFTPALTTIHQPKERLGAM AFDMLLDRIVSKREDSQTIEVHPKLVERRSVADGPYLDYRR >gi|316919811|gb|ADCU01000007.1| GENE 15 13318 - 14967 708 549 aa, chain + ## HITS:1 COG:SMc02588 KEGG:ns NR:ns ## COG: SMc02588 COG4135 # Protein_GI_number: 15963822 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Sinorhizobium meliloti # 9 548 11 558 562 255 36.0 1e-67 MKNGCSCLALFPLVLILAGALPIAAALLVMLQPLSDTFSISHFLASWHLLLQWPGILQSI TLSIFSGFAATLISLWLALALCGQVILRQNSHIARVVSTAILAIPHIALATGLILLLSPS GWLLRVISPTLTGYSRPPDWLIINDPYALSLTLLLAVKETPFLFLMALNIAGRIDVRRQI QSGVALGYPSTRVWWLLLVPQILRGLRLPVFCVLAFGLSVVDIAILLGPQQPTTLSLQIW QWMTDPVLTHQVLATSGTLLLLGITLFSFVLWLMIERAWLRYCRNAHGQRRYKRHMTLRP LWIVGILLTLGSYSVLFIWSIAWRWPFPAALPLQWTFDYWLSSLSQLGTPIINSLLIAGI ANLCSLILCVGFLEWQFLRHKITGLWLLLTPLLLPQISLIFGLQHLAAWFDVIGLLPSVI FAHMLFITPYYFLSLSGTWQAFDRRLLYTAQSLGKTPWSCFWHIKIPLLSKPLAISVALG FAVSIGLYLPTLGFGAGRFPTLATETVAYASGIDRRMAAVAALWQTFLPLLGYGLALFIP VTFSRSKQQ >gi|316919811|gb|ADCU01000007.1| GENE 16 14964 - 15590 186 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 9 195 28 221 329 76 26 6e-13 MSTLTLEQFQVYLHDVPLTPELNVSVAGGETLTLMGPSGCGKSSLLLALAGHAHAPISRR GKVKINGQDVTHLPAHQRKVGLLFQDDLLFPHLNVEQNLLFALPDDVARTERHSQVTQAL AKIEMSEFSRRFPNELSGGQRARISLLRTLLSSPAVVALDEPFSKLDKTLRQHFRRWVFD ELKQANIPALLVTHDEDDVPENGQMICL >gi|316919811|gb|ADCU01000007.1| GENE 17 15592 - 16500 733 302 aa, chain - ## HITS:1 COG:YPO2388 KEGG:ns NR:ns ## COG: YPO2388 COG0583 # Protein_GI_number: 16122611 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 299 1 299 310 477 73.0 1e-134 MWSEYSLEVVDAVARTGSFSAAAQELHRVPSAVSYTVRQLETWLAVSLFERRHRDVELTE AGAFFVEEARTIIKKMNSTRRQCQQVANGWRGQLNIAVDRIVNPRRSRQLVVDFYRHFPD MELMIHPEVFNGVWDALVAGRVDVAIGATRAVPAGGRFSFRDMGFLHWHCLVSPEHPLAM LEGELTDDKIRPFPALCIEDTSINLPKRDTWLLDNQRRLVVPDWQSACDCLESGLCVGLM PAHMAEPLVSAGKLHILQLAQPFPDSACCVTWEDHTRSPAIDWLLDYLGDTETMNQEWLS PE >gi|316919811|gb|ADCU01000007.1| GENE 18 16641 - 17867 1140 408 aa, chain + ## HITS:1 COG:YPO2389 KEGG:ns NR:ns ## COG: YPO2389 COG0477 # Protein_GI_number: 16122612 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 379 1 381 400 476 69.0 1e-134 MRTSSFFMFYLAGLSMLGYLATDMYLPAFGAMQQDLGASAGAISASLSIFLAGFAFAQLV WGPLSDRIGRKPVLLMGLTLFSLGCLGMIWVDTTVELLILRFVQAIGVCSAAVTWQALVI DRYSKGIANRVFATIMPLVALSPALAPLLGAWLLNHLEWQAIFAVLFGISLLLLIPTLML KDTRRKPTEEKTQKKISFFQLMRSNIFSGNVMIFAACSAGFFAWLTGSPFILGDMGYGPN DIGLSYVPQTIAFLIGGYGCRALLSRIGGNLMLPVLLIVYSLCMIAMFVMAMFSTPGLFA ILVPFCIMAMANGAIYPIVVANALTPFPENSGKAAALQNTLQLGVCFLASLLVSVFVESA LLATTAIMAGTVILVMIGYWLKSDSVTKKLSADKLTTTESNKKHVSQH >gi|316919811|gb|ADCU01000007.1| GENE 19 18187 - 19338 938 383 aa, chain + ## HITS:1 COG:YPO2390 KEGG:ns NR:ns ## COG: YPO2390 COG2230 # Protein_GI_number: 16122613 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Yersinia pestis # 1 383 1 383 383 677 81.0 0 MSSSCIEDLSVQNSQWYRIASEMLQSADIEVNGSRPFDIRVKNPHFFKRVLQEGSLGLGE SYMDGWWECDRLDIFFQKVLRAGLENQLPHHIKDTLRVAAARLTNLQSKKRAWIVGKEHY DLGNDLFSLMLDPYMQYSCGYWKDATTLKQAQEAKLKLICEKLQLKPGMTLLDIGCGWGG LAAYAAKHYGVSVEGVTISAEQQKLAQERCKDLDVKILLQDYRDLDSQYDRIVSVGMFEH VGPKNYQTYFNVVARNLKPDGLFLLHTIGANETNMNVDPWINKYIFPNGCLPSIKHIATT SEGKFVMEDWHNIGADYDRTLMAWYERFVQNWPKLEHNYSQRFFRMFSYYLNACAGAFRA RDIQLWQVVFSPRGAEGGLRVAR >gi|316919811|gb|ADCU01000007.1| GENE 20 19400 - 20281 960 293 aa, chain - ## HITS:1 COG:YPO1706 KEGG:ns NR:ns ## COG: YPO1706 COG0501 # Protein_GI_number: 16121966 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Yersinia pestis # 1 293 1 293 293 494 88.0 1e-139 MMRIALFLLTNLAVMLVFGVVLSLTGIQSSSVQGLMVMALLFGFGGSIVSLLMSKWMALR SVGGEVIEQPRNETERWLVETVRRQSQQAGIDMPQVAIYHAPDMNAFATGARRNASLVAV STGLLQNMSRDEAEAVLAHEISHVANGDMVTMTLVQGVVNTFVIFISRLIAQVAAGFLSG NRDEGESSSGNPMIYFAVSMVLEIVFGILASIITMWFSRYREFRADAGSANLVGREKMIA ALQRLKTSYEPQEEGSMMAFCINGRNKSFSELFLSHPPLDKRIEALRTGQYLK >gi|316919811|gb|ADCU01000007.1| GENE 21 20510 - 22513 1956 667 aa, chain - ## HITS:1 COG:YPO1705 KEGG:ns NR:ns ## COG: YPO1705 COG0793 # Protein_GI_number: 16121965 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Yersinia pestis # 10 661 19 668 690 1050 81.0 0 MALALFAGASFAADNVAYNINQLPQLRQEPQHATVSERVTSRFTRSHYRQFDLNDDFSKK IFARYLNMLDYNHNVLLASDVAQFKDRETTLDDELKSGQLDTAYALFNLAQKRRFERYEY ALSLLKSPMTFDGNDTIDVDRSKSPWPTSTEELNKLWTAKVKYDELNLKLAGKDWPEIQK ILTKRYQFAIKRLTQSKSEDVFQLFMNAFAHEIDPHTNYLSPRNTEQFNTEMSLSLEGIG AVLQQTEDDYTQINSMVAGGPAAKSKALKVGDRIVGVGQPGKPMVDVIGWRLDDVVELIK GPKGSKVRLEILPAGKGTKTRTITLTRERIRLEDRAVKMSVKTVDGKKVGVLDIPGFYVG LTDDVKVQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPSGPVVQVRDNNGKIRE DADSDGVVYYKGPLVVLVDRFSASASEIFAAAMQDYDRALIVGEPTFGKGTVQQYRSVNR IYDQMLRPEWPELGSVQYTIQKFYRINGGSTQRKGVTPDIIMPTGLESIDTGESFEDNAL PWDSIKAATYESAGNVQKFDPVLLADHNKRIASNPEFQYIEQDIAHYKALKDRKNIVSLN YAQREKENKDDDATRLMRINERLKASGKKPIKSLDDVPKDYQEPDPYLDETVKIALDLAQ QLQGSTK >gi|316919811|gb|ADCU01000007.1| GENE 22 22560 - 23267 709 235 aa, chain - ## HITS:1 COG:YPO1704 KEGG:ns NR:ns ## COG: YPO1704 COG3109 # Protein_GI_number: 16121964 # Func_class: T Signal transduction mechanisms # Function: Activator of osmoprotectant transporter ProP # Organism: Yersinia pestis # 1 235 1 237 237 305 81.0 6e-83 MENQPKLNSSKEVIAFLAQRFPQCFSAEGEARPLKIGIFQDLVERMQGDENGLSKTQLRS ALRLYTSSWRYLHGVKVGAERVDLDGNSCGVLEEQHVEHARQQLEEAKARVQAQRAEQQA KKREAGEATENRRPRPAGKKPAARRTDAANGDKEARKPRTPRPQQDRTPRANTESAKPRT VPVTDITKLTVGQDVKVSAGKSAMDASVLEITKDGVRVQLSNGLAMIVRAEHLQF >gi|316919811|gb|ADCU01000007.1| GENE 23 23369 - 23860 333 163 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900747|ref|NP_345351.1| hypothetical protein SP_0864 [Streptococcus pneumoniae TIGR4] # 3 152 6 155 165 132 46 5e-30 MSKKEFYADLTRDLAALSRGEYNFIATLSNASALIYERLENVNWAGFYLIDGNTLVLAPF QGKLACVRIPVGKGVCGTAYAKNEVQRVADVHAFAGHIACDAASNAEIVLPLEVNGQVIG VLDIDSTVYDRFDEDDETGLKSVVYALCEHLAECDSAKFVTFA >gi|316919811|gb|ADCU01000007.1| GENE 24 24348 - 25439 718 363 aa, chain + ## HITS:1 COG:YPO1702 KEGG:ns NR:ns ## COG: YPO1702 COG2995 # Protein_GI_number: 16121962 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Yersinia pestis # 1 363 88 450 450 525 74.0 1e-149 MTRLTALSVAILLLMPFALSEPLIQIRLLGTTIYASLLEGIWQMAIQGDPVTASMVAFCT VGAPLILPLSILYLRIGDKLGMNLRPVLLMLDRLKEWIMLDIYLIGMGVACIKVQEYADI DVGNAFFAYVMVTLLTLVTQIHLNLNQLWERFYPRIQPKVSPYSMILCCACHYTGLPDER GRCPRCHTTLHTRQPYSLQKTWAALIAAIMMLFPANLLPISILYVNGVRMEDTIFSGVVS LATSGNMPIAAIVFIASILVPFTKVIVMLFLLISIQFKTQHSLKTRMRLLRMVTWIGRWS MLDLFVIALMMSLVNRDQLLSFTMGPAAFYFGAAVFLTILAVEWLDSRLIWDAHATGNAE YTD >gi|316919811|gb|ADCU01000007.1| GENE 25 25402 - 28038 2311 878 aa, chain + ## HITS:1 COG:YPO1701 KEGG:ns NR:ns ## COG: YPO1701 COG3008 # Protein_GI_number: 16121961 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Yersinia pestis # 3 876 1 881 883 1297 72.0 0 MLMQQETPNTPTNATLRRKRRISPFWLLPFIALLIAGWLIYSTLQERGDTVIIDFQSAAG LVAGRTPVRYQGVEVGTVQKIALSEDLNKIEVSVSIKSDMKDALRDGTQFWLVTPKASLA GISGLDALVGGNYIGMMPGTGKPSKHFVALDTQPKFRLNTGELLIHLFAPDLGSLSAGSL VYYRKIPVGKVYDFTIAENQQGVSIDVLIDKRFANLVKDNSRFWNVSGFKGDFGLDGVSV QMESMAALVNGAIAFDSPQDGKQAKANHNYTLYPDLAHSQRGVAIGLDLPNGDGLAADRT PLIYQGLQVGTLTKMTLEKDGKVNGELTIDPSIVDLMRSGTRIKMTSPKLSLDNAKLSQL LTGNVFELIPGEGDPQNHFTVLPSAESLLQQPNVLKVTLSAPQSYGVDVGQPLSMNGIKI GQVLNRVLKDNNVVFDVAIDAQYRNRIHADSKFIVNSRLDVKFGVDGVQVLGASAQEWLD GGIRVVAGSKGEPKDKYPLYQNSEHAEQGFVGDLPPATLTLLADTLPDIQTGSVVLYRKF QVGEIVDVRPKVNTFEVDIYIQPAYRKLLTPQTIFWAEGGAKVQLNGSGLTIQASPLDRA IKGAISFDNIEGVNVTKGQKRELYASETAARAIGSQITLRTYDASKLSAGMPIRYLGIDI GQVESLKLSNERNEVLAKAVLYPEYVDSFARQGTRFSIVTPEISATGVSNLETLLQPYIN LEPGHGRTMRTFELQQASIADSRYLDGLSVIVDAPETGSLQIGTPVLFRGIEVGTVTGLY LGSMSDRVHVALRISKKYQRLVRENSVFWLASGYNVEFGLTGGMVKTGTFQQFIRGGIAF ATPPTTPLAPQAQPNTHYLLNDNAPDKWQSWGTAIPLR >gi|316919811|gb|ADCU01000007.1| GENE 26 28784 - 29680 514 298 aa, chain + ## HITS:1 COG:no KEGG:Aasi_1217 NR:ns ## KEGG: Aasi_1217 # Name: not_defined # Def: hypothetical protein # Organism: A.asiaticus # Pathway: not_defined # 27 294 487 752 1402 64 26.0 5e-09 MRHSLTIALTTLLIVSCVSHAAMMADEENFKEGYKFYTGDNVDVNEIKAAEYFKKSGNGI ANYYLANMYMYSDEDLAKYSLRENKALAKELLKKAIPSLQEAAAAGDPSAQLYLGYAYKG GMGIEKSEEKSLALIEDSAKQNYPLALASLGSILAKSEPDKAYQYYEKAVNLGLREANEG LVKINEDKYLNTFDPIYEENIRKLATSGNPYAVMWEAHEESHLRHYDKAMSLFQAASQDK LASVKADAFSMIALMYHRGEGVEKSRGMSLKYLNEACRFSKFECYNRDVYKDGKETWP >gi|316919811|gb|ADCU01000007.1| GENE 27 29946 - 30494 203 182 aa, chain + ## HITS:1 COG:no KEGG:ECL_01982 NR:ns ## KEGG: ECL_01982 # Name: not_defined # Def: putative acetyltransferase # Organism: E.cloacae # Pathway: not_defined # 1 177 1 177 182 259 74.0 3e-68 MQIPTLKTERLLLKPLVSEDALQIQKLFPRWEIVRYLVSSIPWPYPDNAASHYVDNIALP AMAKGLAWFWTIRLRDDLDNLIGVISLDDAKDNNRGFWLVPEYQGRGLMREASIEATNYW FNTLNKPVLRTSKAAENIRSQQISASSGMRLIKTEKAQFIGGLLDSELWEITRDEWNIHH SN >gi|316919811|gb|ADCU01000007.1| GENE 28 30820 - 31161 269 113 aa, chain - ## HITS:1 COG:no KEGG:ROD_16821 NR:ns ## KEGG: ROD_16821 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 113 1 113 113 211 84.0 6e-54 MKIDAFAFGTTNWSEIEKTEHPGETGMAYWRTQFFGQKPNQIRVRMVEYSPGYLADHWCQ KGHVLFCMEGELETMLEDGRKFILNAGMSYQVGDNAESHQSRTITGAKLFIVD >gi|316919811|gb|ADCU01000007.1| GENE 29 31303 - 32724 480 473 aa, chain - ## HITS:1 COG:no KEGG:ROD_34541 NR:ns ## KEGG: ROD_34541 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 294 473 139 317 317 153 43.0 1e-35 MNYKYILGLIPLACLGINTAFAESACLSYGKEAKLTGYVEVRTFYGPPGFGENPKTDSRS VQNILFLDEPICSEAAKDREDEKNEIEVTLRTDGSSDLLNALAGKHVSVIGKLEHSEVGN DNTNLILSSVKMSESDAEYQTRIERKPILDAIRPEASKQAGQPVRIKIERLNVSNGSAIL IGNIVAEEGKTLDWSLAKNCEADLDKMLWVVLNKTGEKWNVKEMTICASEPPYWYLKDDQ LTMPCEVYKGMDSMQEGSQLEDLGQRCEALKEKPQKKTESTKNSDAPLALDNNQKVEMLT QFQQFQQALKSDNVSAVKSFFVFPLTWNISFWPKNEGNPPEKITEEVFDKYSLQILNELK PLSLIHVDLHTMAITEYRKSGLSKEEQRRTYYPADGDDENIYYYKENNVKHFVNGTCDDV TNAEFFDNEMMASIGSEPNKQLPGMSELCDHAEVFDFAIINNKLRLISSSFAG >gi|316919811|gb|ADCU01000007.1| GENE 30 33425 - 33739 255 104 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKLDWFNNVENRTHPWEGMRLTWLTTALTVPDVRAATDFYTNAMGMVAIAELEGDDAEL LLRAFATAVRTLLLIRKAGILIYRVRKRQAPQPHSFSTCTLMTP >gi|316919811|gb|ADCU01000007.1| GENE 31 33718 - 33870 73 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYVDDAVAMVDEMIKAGATVLNEASEMFWGDLKARIQDPFGFIWDIAQKR >gi|316919811|gb|ADCU01000007.1| GENE 32 34178 - 35110 624 310 aa, chain - ## HITS:1 COG:MT0820 KEGG:ns NR:ns ## COG: MT0820 COG2837 # Protein_GI_number: 15840211 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Mycobacterium tuberculosis CDC1551 # 14 306 19 307 335 298 50.0 8e-81 MSHFDVTNGPGENAFFLVFNLMDTVETKNTLIDFCSEFSAISRSMRNRFPELQISSVMGF GAQAWRKYFPEQPVPKELFPFEEIKGQKHTAVSTPGDIFFHIRALRVDACYEMASIICKK LSEITTVVDEVHGFRYFDGRSIIGFVDGTENPEYPDERIECAVIGDEDLSFRGGSYAFVQ KYIHDMKAWEDLPTEMQEKVIGRHKFNDVELADEEKNENTHNVVTNIQDEQGNDLKIVRA NMPFSNPAKGEYGTYFIGYSRYFSTTKRMLENMFIGDPIGNSDKLLDFSVAVTGTLFFIP SPDLLERLGG >gi|316919811|gb|ADCU01000007.1| GENE 33 35725 - 36888 1106 387 aa, chain + ## HITS:1 COG:STM0509 KEGG:ns NR:ns ## COG: STM0509 COG3203 # Protein_GI_number: 16763889 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 8 387 4 377 377 437 58.0 1e-122 MFKHHVAKKVALAVALGCASFSSFAEITLLEQNPQAGDPLSRLKFQVGGSIRPQFIDEMG NSDKGSYKRNGYDGGTRVRFSADYYLFDDVSLIGYYELGLNVPAIFNWDNHYAEGAANTD RRMLFGGLKSATWGTLTYGKQNSIYYTVVGAKTDIWDFDMQAQAPGNGYNGNYDGSYRSY NLVQYKNTFGPVDLYVGGVLHDDSHPAGLNNGNPLRYQRKGGGALGVDYHITDELTWGTA YSYIQQSIKQSNGVDNGNKDNGQQLLGTGLSWKPDNWTLAASAGWYRNFLMTGVKNRHDY FAGNAYGVEYYAGYTFPVSQYLVKNITPYYAGDRLKFNTGRDYQSNHQTLGISTKFDYGF QIDVEHVFTNTTDNKSDLNLVRLRYDF >gi|316919811|gb|ADCU01000007.1| GENE 34 36948 - 37415 400 155 aa, chain - ## HITS:1 COG:no KEGG:NT01EI_1882 NR:ns ## KEGG: NT01EI_1882 # Name: not_defined # Def: lipoprotein, putative # Organism: E.ictaluri # Pathway: not_defined # 4 150 7 154 163 98 38.0 8e-20 MKKILTLCLSAFVLAGCVSTEGQSPFKSYFSCDVPAASHYPRIESKSDLLVNMRKLGVEA ERKNVVAAQWAQQATTSEEKAKIQACTGEILHASMAIIQPQVERVKSVTTESAQINALND VDSKWQAYMNSITQKGVDASLAQAFNSAADNYDKM >gi|316919811|gb|ADCU01000007.1| GENE 35 37565 - 38002 456 145 aa, chain - ## HITS:1 COG:STM2795 KEGG:ns NR:ns ## COG: STM2795 COG1652 # Protein_GI_number: 16766106 # Func_class: S Function unknown # Function: Uncharacterized protein containing LysM domain # Organism: Salmonella typhimurium LT2 # 1 145 1 149 149 184 66.0 6e-47 MGLLSFVKDAGEKIWDAVSGNRDDKLKEHINKLGLPDADKVDVKVADDGTATVTGEGISQ ELKEKILVAVGNVAGISQVDDQLAAAQAGIESHFYTVKAGDTLSAIAKAQYGNANEYMRI FEANKPMLSHPDKIYPGQMLIIPQK >gi|316919811|gb|ADCU01000007.1| GENE 36 38455 - 39651 783 398 aa, chain - ## HITS:1 COG:STM2372 KEGG:ns NR:ns ## COG: STM2372 COG0477 # Protein_GI_number: 16765699 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 8 389 9 390 392 431 69.0 1e-120 MSHPVFVSTPKANHALFPLTSAVFLTYLTVGLPLPVIPLYVHNQLGMSNTMVGIAVGTQF LATVFTRGYAGRLADQQGAKRSTLQGMLACSLAGVAYLLAALLPAEAMTKFVILLVGRLV LGFGESQLLTGNLTWGLGLLGPSRSGKVMSWTGMAIYGALAAGAPLGLLLNQHWGFAALG ISTLILPLVAILINFKVKAVEPHAGQRIPMWRMLGKIWQPGVALALQGVGFAVIGTFISL FFGSHGWGHAGLALTCFGLSFVLMRVLFGQLPDRAGGIKVAIASLLVETVGLVLIYFAST SVIALIGAALTGAGCSLMFPALGVEVVKRVPVHMRGTAMGGYAAFQDVSYAIAGPLTGIL ATRLGYSSVFAVGAACSALGIVMILLFMRPVSPQAVES >gi|316919811|gb|ADCU01000007.1| GENE 37 39921 - 40259 348 112 aa, chain - ## HITS:1 COG:no KEGG:PC1_1899 NR:ns ## KEGG: PC1_1899 # Name: not_defined # Def: DNA-binding transcriptional activator OsmE # Organism: P.carotovorum # Pathway: not_defined # 13 112 11 110 110 124 63.0 1e-27 MKYTKSAVMGIAAVAAAFAISACSTYDRAASYVTEPVVKDVKVGMTKQQVVDIAGQPATS ITMVNARGTCSTYLITGTDKKPQNYFVSFDDTGKVLNKGYQSCAEYDTNPQK >gi|316919811|gb|ADCU01000007.1| GENE 38 40508 - 40903 179 131 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|189023670|ref|YP_001934438.1| Ribosomal protein P2 [Brucella abortus S19] # 2 117 64 177 184 73 34 4e-12 MGLLDSLGGMLGGQSQNADQIKAIMAWVEQQGGITALIEKFKSQGLGSIIESWIGTGNNQ PISGEQVQNVFSIESITALASSLGINAESASQLLATYLPKLIDGLSPNGEIPQGNSLVNA GLDILKGKFFS >gi|316919811|gb|ADCU01000007.1| GENE 39 41175 - 41519 164 114 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKILTAALLIALAGCSSPESITANKHQVMDLKISRAAGIYSQCLNKKWSHINPATRYYN NNNTHTIASYLDGQGEMASAKIQTISDNQSDVEIFLTSRGNSQQALLEAAKSCV >gi|316919811|gb|ADCU01000007.1| GENE 40 41706 - 42008 203 100 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLRNRAWVAAMVFALALNSSVSANKGTIRFVGVLVESGCEITPTVKGFHSSCYQDGDYQN RAYEALKSGDQVVLPSNVANVRLQPIVGHPNLGHLVISYH >gi|316919811|gb|ADCU01000007.1| GENE 41 42348 - 42575 107 75 aa, chain + ## HITS:1 COG:no KEGG:ESA_01424 NR:ns ## KEGG: ESA_01424 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 4 75 7 77 79 79 51.0 5e-14 MKTILAVFVLTYVTLFLSGYGILIGSHKTVAGLGLKCKYLTARSIVAADYLHSSNGVMGV VAECPIFKKVSNIVD >gi|316919811|gb|ADCU01000007.1| GENE 42 42667 - 42828 112 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTALEDVEVMIKQFYFWMIVGCGLFLLMSGFVMRSTFEGAIGTLLILYKTVMD >gi|316919811|gb|ADCU01000007.1| GENE 43 42871 - 43827 767 318 aa, chain - ## HITS:1 COG:ECs2429 KEGG:ns NR:ns ## COG: ECs2429 COG1105 # Protein_GI_number: 15831683 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Escherichia coli O157:H7 # 1 310 1 309 309 366 62.0 1e-101 MTPIFTLTLAPSLDTSTTTAKLYPDGKLRCSEPIYEPGGGGINVARAIAHLGGKACAIFP AGGPTGQHLAELLQQERVEIQTVKTQAWTRQNMHVHTEVTCEQYRFVMPGAKLTTQEFEQ LRECVLALPHGSILVISGSLPEGVTVAELQSLIRLAQTKGIECVLDSSGQALIAGLEVGG LLLVKPNQKELSELSGKDLLEEPSSVLEAAQSIVAAGKSKYVVVSLGAQGALAVAQNHWV QVVPPPVKMRSTVGAGDSMVGAMVLKLSQQADLLDIARYGVAAGSAATLNKGTRLCQQHD VNALYGYLCQQQTPLNDV >gi|316919811|gb|ADCU01000007.1| GENE 44 44116 - 44376 170 86 aa, chain + ## HITS:1 COG:no KEGG:ETAE_1823 NR:ns ## KEGG: ETAE_1823 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 7 86 1 80 80 139 88.0 3e-32 MYYGASMKRIIKGDTNFSHLVVAHAAIDQHAKAYGLARQGWPSTYHIKYRDKLIAVEVVT RRQSYVATVMVGARSLTKLCGMPAAA >gi|316919811|gb|ADCU01000007.1| GENE 45 44486 - 44839 345 117 aa, chain - ## HITS:1 COG:no KEGG:Dd586_2169 NR:ns ## KEGG: Dd586_2169 # Name: not_defined # Def: protein of unknown function DUF2511 # Organism: D.dadantii_Ech586 # Pathway: not_defined # 3 117 2 112 112 124 55.0 2e-27 MKKRVVLTGILAIWGCTVSGSALAARTVETVSKAQFGKQWAFVKEEVQLQCTKDHALFVI NASTLAQYPLDEKAAELVKTKKMAAQPLETILLDDPDNAGHKMSVAPFIERAQQLCQ >gi|316919811|gb|ADCU01000007.1| GENE 46 44885 - 45769 576 294 aa, chain - ## HITS:1 COG:YPO1785 KEGG:ns NR:ns ## COG: YPO1785 COG1276 # Protein_GI_number: 16122039 # Func_class: P Inorganic ion transport and metabolism # Function: Putative copper export protein # Organism: Yersinia pestis # 1 294 1 294 294 180 40.0 3e-45 MSIAALYVLCRWIHFASALQIFGLALYVGWIAPPKLRNGLEKQLNPLRGVCLTLCALSSW LIVALQAGQMGDGWGDAFQPMIWLAVMQTTFGEAWLFQLIFSSLLVAVLCLPAVMRRGML IILAFALLVTLARTGHASAEQGVLGIVHRLNNGVHLLSAGFWFGGLVPFGLCIKELQRQT AAKNFAMDAVIRYSRWGHLAVAFVIVTGMANTILILGHWPLDFNSLYERWLWGKVLLVAA MVAIALYNRYRVVRSIGSNRQQAFILLARNAAVEWVLALLVLAAVSFFATQPPI >gi|316919811|gb|ADCU01000007.1| GENE 47 45778 - 46155 352 125 aa, chain - ## HITS:1 COG:STM1875 KEGG:ns NR:ns ## COG: STM1875 COG2372 # Protein_GI_number: 16765217 # Func_class: R General function prediction only # Function: Uncharacterized protein, homolog of Cu resistance protein CopC # Organism: Salmonella typhimurium LT2 # 23 125 21 124 124 109 57.0 1e-24 MKLIKSTQIHLSGLCAALLLSVSPQVFAHAHLTEQTPAAKSVVSAPSELTLVFSEGIEPS FSKVTVVGPEKKNITTGKLLVTGADKTHVSLPLSQPLEQGEYNVNWNVVSVDGHKTKGEY TFSVK >gi|316919811|gb|ADCU01000007.1| GENE 48 47668 - 48780 1323 370 aa, chain + ## HITS:1 COG:YPO1222 KEGG:ns NR:ns ## COG: YPO1222 COG3203 # Protein_GI_number: 16121511 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Yersinia pestis # 1 370 4 374 374 503 78.0 1e-142 MKRNLLAVIIPALLVAGAANAAEIYNKDGNKLDLFGKLDGLHYFSDNNGSDGDQSYVRFG FKGETQISDQLTGYGQWEYQANLNHTESQDNNNFTRVGFAGLKFADFGSLDYGRNYGVIY DVGAWTDVLPEFGGDTYGADNFMFQRGNGMLTYRNTDFFGLVDGLNFALQYQGKNDSPTE SNNGRDVQGQNGDGYGMSLSYDLGWGVSAAAAYSSSDRTNDQNRMKFGHGDKADIYTGGL KYDANNVYLAAMYTQAYNANRFGDFSASGPDAVYGFANKSQNVEIVAQYQFDFGLRPSVA YLQSKGKDLGNGYGDQDLMKYVDVGATYYFNKNMSTYVDYKINLLDDNRFTNNAGINTDD IVALGIVYQF >gi|316919811|gb|ADCU01000007.1| GENE 49 48899 - 49702 623 267 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163802692|ref|ZP_02196583.1| 30S ribosomal protein S21 [Vibrio campbellii AND4] # 1 263 1 266 271 244 47 1e-63 MPFLSINDRQIHYIDRGEGLTLLLGHSYMFDSNMWAPQIEALSQHFRVIAPDLWGHGKSD PLPQSRHSLKDLACDHLALIDALGINEFAIVGLSDGGMWGVELAAMVPERVRALVLMDTF VGLEPEVTFKKYDAMLNAIEAAGKVPAALVEQIAPMFFRRDPLPHLVEALAAHLSDMSES ALRQSIVPLGRMIFGRGDNCPLLEELEMPALVITGEQDAPRPPLEGYLMAELLNCKQLIV PQAGHICTLEQPEWVNQALLNFLVPLK >gi|316919811|gb|ADCU01000007.1| GENE 50 49791 - 51839 1665 682 aa, chain - ## HITS:1 COG:YPO1780 KEGG:ns NR:ns ## COG: YPO1780 COG1770 # Protein_GI_number: 16122034 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Yersinia pestis # 1 677 1 682 683 1007 72.0 0 MNKAPVAAKHPHVMEIHGDTRTDNYYWLRDDERSDDAVLSYLKAENAYTEACMRGEEALR QRLFSEMVERIPQEDESVPYQRNGYRYQSRYKPEQEYALYVRQKVDTGENAEWDLLVDSN ERAQGHDFYALGGLEVSPDNQLMAIAEDFLSRRQYDIRIKRLGDQSWYDEVLENTAGHFE WTNDSASLYYVRKHPQTLLPYQVYRHRLGTSVADDQLIYEETDDTFYVGLEKTISNKYIL IHISSTTTSEILMLDADDTDATPQTFLTRRRDHEYSLDHYRDTFYIRSNKEGKNFGLYQS ASADEKAWQPIICARDDVMLEGFSLFKDWLVVEEREQGLTHLRQIHWQSGEEKHIRFDDP TYMTWLSFNPEPDTALLRYGYSSMTTPSSVFQIDLDSGERTLLKQQEVKNFDSGAYRSER LWVSAHDGVQVPVSIVYRQDMFKAGQNPVLVYGYGSYGSSMDPAFSISRLSLLDRGFVFA LAHIRGGADLGQQWYEDGKLLHKQNTFSDFISVTQHLVDEQYANPKQVYAMGGSAGGLLM GAVVNQAPQLYHGIVAQVPFVDVVTTMLDESIPLTTGEYDEWGNPNDAEYYHYIKQYSPY DQVKAQDYPHMLVTTGLHDSQVQYWEPAKWVAKLRDMKTDNNQLLLYTDMDAGHGGKSGR FKAYEDIALEYAFMLALAGIHQ >gi|316919811|gb|ADCU01000007.1| GENE 51 51978 - 52865 600 295 aa, chain - ## HITS:1 COG:STM3388_3 KEGG:ns NR:ns ## COG: STM3388_3 COG2200 # Protein_GI_number: 16766683 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Salmonella typhimurium LT2 # 20 265 4 251 273 145 35.0 6e-35 MNNKHYNVLGMPAPNVSPLELEIALQAALQSAFTEHEFYLDYQPQCNIKGTLLGAEALVR WHHPQQGILQPSDFLDSLERFGLMQTLNLWLIDQVCQLLQHLHQAVSSDLALSFNLPLAQ LYTQGFIDQLAVYIERYAIPADKLVIELLGNNELFSDEIILAELERLRALGVGLSIDHFG ENYQLLALLKDLPLTQIKIPGELIQALAKPEASQLVEHLILIAKALNMNIVAEHVETAEQ FKQLEELGCPALQGFYLFSPMSEKKFLIVSKQLTEIRRSYTDVDKEAFCPIDNKR >gi|316919811|gb|ADCU01000007.1| GENE 52 52823 - 52978 57 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGLAFPKHYSAYYSFCYLIINKVMLDLTAFRLVLSNLKTLKQNHKISIDYC >gi|316919811|gb|ADCU01000007.1| GENE 53 53497 - 53856 350 119 aa, chain - ## HITS:1 COG:no KEGG:Spro_2801 NR:ns ## KEGG: Spro_2801 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 119 1 119 119 102 44.0 3e-21 MNKIALSVTGLVFAFSAGVAQAQQSEQRVVTIANCEQTTATQLSTMVKNDFLQNRLPRWA DDKNLLGTSTPVVWVNQDQVTQNGNDWQLLLTVRGTKIDKTYTVKVDCKAGKLEYSHPQ >gi|316919811|gb|ADCU01000007.1| GENE 54 53953 - 54261 268 102 aa, chain - ## HITS:1 COG:YPO1778 KEGG:ns NR:ns ## COG: YPO1778 COG3097 # Protein_GI_number: 16122032 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 99 1 99 102 130 65.0 8e-31 MKREITFYSRFESDILSGKKTITIRDSSESHFEKGELLSVSRNEDGQYFCTIEVDSVTPV LMNELTEVHAAQENMTLGELKQVISEIYPGLNELYVISFHMR >gi|316919811|gb|ADCU01000007.1| GENE 55 54301 - 54606 288 101 aa, chain - ## HITS:1 COG:YPO1777 KEGG:ns NR:ns ## COG: YPO1777 COG3141 # Protein_GI_number: 16122031 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 101 1 106 106 90 55.0 9e-19 MSVEIQYVVVRDGVEKMTFASKKEADAYDKMLDLADNLGEWLKMSPLDIEDDTIETLSFY LAEHKDSLSQLLRRGSLASIKSTEENKKSEKKVKVAIDNAA >gi|316919811|gb|ADCU01000007.1| GENE 56 54704 - 55213 287 169 aa, chain - ## HITS:1 COG:CC3261 KEGG:ns NR:ns ## COG: CC3261 COG0454 # Protein_GI_number: 16127491 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Caulobacter vibrioides # 6 159 3 160 173 67 32.0 2e-11 MTNENITFQFAEPQHLAALAEVERLAAEQFPADRLPESLRHTTVSAERLEIAQRAQNLWV ALRNEKPIGFVMLETHGKFALLAEVSVLPTFSQRGIGHYLVDHALVAARQRGFSGVGLTT FLDLPWNAPFYQKVGFTLVGDEQFPVLEQFLREERSAGLVQRVAMYYYF >gi|316919811|gb|ADCU01000007.1| GENE 57 55292 - 55501 265 69 aa, chain - ## HITS:1 COG:ECs0662 KEGG:ns NR:ns ## COG: ECs0662 COG1278 # Protein_GI_number: 15829916 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 103 78.0 6e-23 MSKKTGHVKWFNESKGFGFITPADGSKDVFVHFSAIKSDGFKTLAEGQQVEFAIQDSPRG PSAADVIAL >gi|316919811|gb|ADCU01000007.1| GENE 58 56191 - 57342 1061 383 aa, chain - ## HITS:1 COG:ECs2370 KEGG:ns NR:ns ## COG: ECs2370 COG2230 # Protein_GI_number: 15831624 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Escherichia coli O157:H7 # 1 383 1 382 382 644 77.0 0 MSSTCVIDSEIKADNWYRIAEEMLSQAGITINGNQPQDIRVKNPEFFHRVLQEGSLGLGE SYMDGWWECDRLDIFFQRILAAELDTHLPKHFSDIVRIASARIFNYQTRKRAWIVGKEHY DLGNDLFSRMLDPYMQYSCAYWKDAETLEQAQQAKLRMICEKLQLKPGMKLLDIGCGWGG LAQFAAQEYGVSVQGVTISAEQQKMAQDRCAGLDVKILLQDYRDLDEQFDRIVSVGMFEH VGPKNYRTYFEVVAKNLKPDGLFLLHTIGSNQTDLNVDPWINKYIFPNGCLPSVAHIASK SEDLFVLEDWHNFGCDYDRTLMAWYDAFQQSWPEIKDNYSDRFYRMFTYYLNACAGAFRA RNIQLWQVLLSPKGVEGGIRVPR >gi|316919811|gb|ADCU01000007.1| GENE 59 57770 - 58948 994 392 aa, chain + ## HITS:1 COG:purT KEGG:ns NR:ns ## COG: purT COG0027 # Protein_GI_number: 16129802 # Func_class: F Nucleotide transport and metabolism # Function: Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) # Organism: Escherichia coli K12 # 1 392 1 392 392 603 75.0 1e-172 MLSIGTALRPHATRVMLLGSGELGKEVAIECQRLGIEVIAVDRYPDAPAMQVAHRSHVVN MLDAQALKAVIERERPDFIVPEIEAIATSMLVELERDGQKVVPCARATQLTMNREGIRRL AAETLQLPTSRYRFADTENEFNEAAQEIGFPCIIKPVMSSSGKGQSLIRSADNMAQAWQY AQSGGRSGEGKVIVEGSVKFDFEITLLTINACDGLHFCAPIGHRQQDGDYRESWQPQAMS DIALAKAHDIAGKVVTALGGYGLFGVELFVCGDDVIFSEVSPRPHDTGMVTLISQDLSEF ALHVRAFLGLPIGTIRQFGPSASSVILPRLHSNDVVFDNTRNALQSQTQLRLFGKPEIDG TRRLGVALAYDETVEKAIALAKQVSNSVVVKG >gi|316919811|gb|ADCU01000007.1| GENE 60 58992 - 59174 265 60 aa, chain - ## HITS:1 COG:STM1823 KEGG:ns NR:ns ## COG: STM1823 COG3140 # Protein_GI_number: 16765164 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 59 1 59 59 62 66.0 2e-10 MNSGMPALSHTEQQVAADRIHRLMEQGMSSGEAIAQVAAEIRANHTGAHIQVSFDDEDED >gi|316919811|gb|ADCU01000007.1| GENE 61 59360 - 60751 1061 463 aa, chain + ## HITS:1 COG:YPO1773 KEGG:ns NR:ns ## COG: YPO1773 COG0147 # Protein_GI_number: 16122027 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Yersinia pestis # 11 461 6 457 458 624 67.0 1e-178 MNATTSSSASLSRIDLKYTPDAILHYFAPLAQQPWAMLLYSGGASHPHNRFDILVAQPIL TLTTRGEQTAVAEQSEVRYSTRDPLSLVQEELQRLLPKMSEQEDTPFCGGAVGLWGYDLG RRFETLPALALADLTTPDMAVGIYDWALVADHQLKRLTLLAHGDAQSRLDWLSRQTTQPP QHFQLTSGWQANLTKAEYDQRFAQIHDYLHAGDCYQINLTQRFSARYQGDEWQAFLRLNA QNRAPFSAFIRLPDSAILSVSPERFLQLEQKQISTRPIKGTLPRLADPQADKIQAKKLAD SKKDQAENLMIVDLMRNDVGRVALAGSVRVPELFVVEPFPAVHHLVSTITATLPETINAT DLLRACFPGGSITGAPKIRAMQIIEELEPHRRNAYCGSIGYISCCGNMDTSITIRTLLAE NGQIHCWAGGGIVADSQVDAEYQETFDKVGKILPILGDMEILS >gi|316919811|gb|ADCU01000007.1| GENE 62 60748 - 61320 368 190 aa, chain + ## HITS:1 COG:STM1825 KEGG:ns NR:ns ## COG: STM1825 COG0494 # Protein_GI_number: 16765166 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 8 188 8 188 192 239 67.0 2e-63 MMQLSPELAEFVTRFQLQSPLPTHEGHNLRQAAVLIPIVNRPRPTLLLTQRSSHLRKHAG QVAFPGGAADITDGSLIYTALREAHEEIALPPESVHILGQLPAVDSITGFHVTPIVGLLP ADITPIASEDEVAAVFEMPLHEALALSRYHPLDIHRRGHSHRVYLSWYERFFVWGMTAAI IRRLAQQVHC >gi|316919811|gb|ADCU01000007.1| GENE 63 62010 - 63374 1380 454 aa, chain + ## HITS:1 COG:YPO1771 KEGG:ns NR:ns ## COG: YPO1771 COG1760 # Protein_GI_number: 16122025 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Yersinia pestis # 1 453 1 453 454 810 85.0 0 MISVFDMFKIGIGPSSSHTVGPMKAGKQFVDDLIDKGLLPSVTRISVDVYGSLSLTGKGH HTDIAIIMGLAGNMPDTVDIDAIPGFIRDVEQRQRLLLANGQHEVDFPREGGMNFRSDNL SLHENGMQIHAFAGDKVIYSKTYYSIGGGFIVDEEHFGKDQAGGVTVPYPFHSAQELLDH CKETGLSISGLVMKNELALHTKEEIYAYFGDVWATMQACIDRGLNTEGLLPGPLRVPRRA SALRRMLVTTDKYDKDPMTVIDWVNMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYY NHFIEPVTPEVFVRYFLASGAVGALYKMNASISGAEVGCQGEVGVACSMAAAGLTELLGG SPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPCIERNAIASVKAINASRMALQRTSEPRVS LDKVIETMYETGKDMNAKYRETSRGGLAIKVQCD >gi|316919811|gb|ADCU01000007.1| GENE 64 63466 - 64347 519 293 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2980 NR:ns ## KEGG: Ent638_2980 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 285 1 266 274 235 48.0 1e-60 MEIKLHANATTTPRIRRYIQQSDKSDRVLAQELGISVATVRRWSQRQDVADQHTAPKNVH KVLRPEQSLLINWLRQKLMMPLDELLIFVNVGMQQSVSRAGLDRYLRRGELAHMNVLEAR ELRGKKALKAGIKPGKLRLFYQRVSLLPEDGGEHHVLWAQEEVSGWIAARAFAGASPMLV VHWLTSLMTEVPAAIQSIETENKKLFGNELSPDHPLQKWSAEQGLPLTLRAEDTTDITLR LECALSELIPALVAMDLDSYLQQISVQYNQQWPQKKLGDMTPEMFWARQGDSF >gi|316919811|gb|ADCU01000007.1| GENE 65 64525 - 65805 1132 426 aa, chain + ## HITS:1 COG:BS_ywbA KEGG:ns NR:ns ## COG: BS_ywbA COG1455 # Protein_GI_number: 16080890 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Bacillus subtilis # 1 426 1 435 444 345 43.0 1e-94 MSNVLGFLEAKLMPLAAKAAQQRHLCAIRGAYVSFMPFIIVGSVLLIISSFPSQSYQQFM SGMFGSTWSNIVEIPFNAVFSTMSLFISFLVAYRLAEHYEEDRVSSGILALVCFLILTPF IKVEALGNLTVVPTEWIGSKGLFVAMIGSLLWTELFCFLKRKKLVIKMPEGVPPAVQESF AALIPALIVIVLVLAIRIIFEHTRYETIHQFIYQVVATPVRHFGTSYVGALLTVLSITIL WSVGINSGSMVNGIIRPLWMENQTDNIAAIQAGVTPPHIITEQFFDMIWMGGAGATLSLV IAMLFFARSKSMREVARLGAGASVFNINEPILFGLPIIMNPIMLIPFNLVPLVLVTVQYI AMKIGMVAVTTGVFIPWTLPPVISGFIVTGHLSGSLMQIVNLLIGAMLYLPFLRILDKQY CTAEKA >gi|316919811|gb|ADCU01000007.1| GENE 66 65841 - 66806 801 321 aa, chain + ## HITS:1 COG:CC2359 KEGG:ns NR:ns ## COG: CC2359 COG1446 # Protein_GI_number: 16126598 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Caulobacter vibrioides # 3 275 20 307 327 145 35.0 8e-35 MWGMIATWRMALEGIISASETLKNGEKSAKAVVNAVAEVEDFPFYKSVGYGGLPSENGEV ELDAAFMDGDTLAFGAVGNLVDIANPIRVAHALSRERFNSLLVGVGAREWALSQGFPEKT MLTERALQHYRKRCHETIDRGLSPYDGHDTVGMIGLDKRGSMSVATSTSGLFMKRRGRLG DSPIIGSGFYCDSQIGAATATGVGEDLMKGCTSYEIVRRMEGGMSPQDAADSVIGELEDK LMARFGRVGDLSVVCMNRLGEFGVSTNIQTFSFVVATRDLPATVYLAERRDDHTHYAPAD EQWMADYAARIRAPIGEPQYD >gi|316919811|gb|ADCU01000007.1| GENE 67 66799 - 68274 997 491 aa, chain + ## HITS:1 COG:PA3831 KEGG:ns NR:ns ## COG: PA3831 COG0260 # Protein_GI_number: 15599026 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Pseudomonas aeruginosa # 156 486 167 491 495 281 46.0 2e-75 MIKSQVTSDYSVSADADSHLISFPSSTLLAQAGLHVELLCALQKDASTSVADCSYGCHPF GRVTLLPTDHGFDYPSHKLQAALRPLLRKTHCSALTVDCSLWDTESQTDRAQLTSLLIFL LNLDYQLSDLGLKSTTIQNQRITQLTLWCQPHHQTSLEKLLREAKATSVGMMAARRIADL PSDRCTPEFVVTEIEKLIAPYRSLRCEILEENQIKLQGLGLLHAVGKGASNPPRLMILRY EGRDQGPFSAYVGKGITFDTGGLWLKGGDGMYTMKYDMCGAANVFGLLIAAAELKLPVRL IGVLALAENMIGPDAIRPGDVVTSYSGLNVEINNTDAEGRLVLADAIAYASKLTLDDQQP QYIIDMATLTGAVVKALGYDLTGLWSQNQELSHKLTQAGREVRDEVWSLPLDARFAPQVE SAIADVCNTPTNNAAISTSAAYFLSRFCPDDIPWAHLDISGTALWREQGHSVASGRPIPL LMQHLLNDLEK >gi|316919811|gb|ADCU01000007.1| GENE 68 68276 - 68587 408 103 aa, chain + ## HITS:1 COG:VC1281 KEGG:ns NR:ns ## COG: VC1281 COG1440 # Protein_GI_number: 15641294 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Vibrio cholerae # 1 100 1 100 101 100 59.0 7e-22 MKKILLVCDLGMSTSLMVKKMQEAAKSRGIDVEICAKSVRDYKTCAAEFDVALLGPQIRY KLPECEKIAQEQGKQIACIDMMAYGTMKGDKVLDQALALIEGA >gi|316919811|gb|ADCU01000007.1| GENE 69 68589 - 68900 330 103 aa, chain + ## HITS:1 COG:VC1283 KEGG:ns NR:ns ## COG: VC1283 COG1447 # Protein_GI_number: 15641296 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Vibrio cholerae # 1 102 1 101 111 85 53.0 2e-17 MDLENEVMELIANSGYARSLVFQAIRCAREERDFAQAETYMQQAQEALSSAHHVQTKLIE MDEGTGKIPVHLVMVHAQDHLMNAIMLMELGREIIALHQQIAH >gi|316919811|gb|ADCU01000007.1| GENE 70 69233 - 70804 1024 523 aa, chain + ## HITS:1 COG:STM1827_2 KEGG:ns NR:ns ## COG: STM1827_2 COG2200 # Protein_GI_number: 16765168 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Salmonella typhimurium LT2 # 261 511 1 251 272 285 50.0 1e-76 MRFSKVAVKKYRIYRLFLAAGAGLFAFTISMGGRYSQELDTVHSAQHKAALSAVKQIDHL LSSANDISTTHNELINSTCPQAQPRLLNMSVQLQTVRAILLVKEGLIFCSSLFGHRDYSL GTMFPPFAKPGHNLMLKAALLVKRGSPTLIYWVPTRTDPSSGMIHVFHIAMLSNFILEPQ KPYVDYMALNVDGNTLIYGHNNILRTAEITDKPSVSQASSHYAYSVGVFSDPDWKLALRS LPQHIPLSLLVFLLAGIIVFIVSANRMNLAYHISSAIQRKQFQLFCQPIIQTQSGECDGV EILLRWHDERQGWISPDIFIPLAEQHGLVQSLTRHLLYTLEQNQLLFPQTPDFYISINIA AEHFSQGQITKDLKSLWYQSNPQPKLMLELTERTELQQADYEQLHELRALGASLALDDFG TGHSSLSYLQNLHPDVLKIDKTFCATIGTDAINAKVLDSIVALGKELKLKMIVEGVETQL QADYLRKLGVCAMQGYFFARPMPITEFPQWLMRHQARHKDTVQ >gi|316919811|gb|ADCU01000007.1| GENE 71 70865 - 72424 1416 519 aa, chain - ## HITS:1 COG:ECs2525_1 KEGG:ns NR:ns ## COG: ECs2525_1 COG0861 # Protein_GI_number: 15831779 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 238 1 239 240 383 83.0 1e-106 MEFLLDPSIWVGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARIIGLSLALLMRLA LLSVISWMVTLTRPLFSVGDFVFSGRDLILLVGGLFLLFKATMELHERLEGHTHEVNNKG YSSFWSVVVQIVILDAVFSLDAVITAVGMVDSLPVMMCAVVIAMAIMLLASKPLTNFVNE HPTVVVLCLSFLLMIGLSLLAEGFGLHIPKGYLYAAIGFSVLIEMFNQIARRNYIKHERR RPMRQRTAEAIINMMGGRKNKQNGHRGEDVVVAKEEETFAAEERYMISGVLTLASRSLRT IMTPRNEITWVDCRRSPQEIRSQLLETPHSLFPVCDGELDQLVGIVRAKDLLVALDEGVS VAEFAARSAPIVVLESLDVINVLGVLRQAKGRLVIVSDEFGMVQGVVTPLDVLEAIAGEF PDEDETPDVVVQENGWLVKGGTDLHTLEQMLGWDGLVSESSSDCASVAGLLLAHFDQMPQ AGEVVELHGLRFQVMEVKDYRIELIHIERIAQPSEFGDE >gi|316919811|gb|ADCU01000007.1| GENE 72 73114 - 74073 982 319 aa, chain + ## HITS:1 COG:YPO1758_2 KEGG:ns NR:ns ## COG: YPO1758_2 COG3444 # Protein_GI_number: 16122014 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Yersinia pestis # 159 319 1 161 162 269 87.0 4e-72 MSIAIIIGTHGAAAEQLLKTAEMLLGEQSNVAYIDFVPGENAETLIEKYNERLTHLDSSK GVIFLVDTWGGSPFNAASRIVTDKENYEVITGVNVPMLVETFMARDDDPSFDELVALALE TGREGVRALRAKEPEPAKPQPKPAAPKAPQAPMSPEDHMKIGLARIDDRLIHGQVATRWT KETNVSRIIVVSDEVAADHVRSTLLKQVAPPGVTAHVVDVEKMIRVYNNPAYGRDRVMLL FTNPTDVVRLVENGVNITSVNIGGMAFRQGKTQITNAVSVDEKDIEAFKKLDARGIELEV RKVSSDSRLKMMELINKMN >gi|316919811|gb|ADCU01000007.1| GENE 73 74139 - 74936 949 265 aa, chain + ## HITS:1 COG:YPO1757 KEGG:ns NR:ns ## COG: YPO1757 COG3715 # Protein_GI_number: 16122013 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Yersinia pestis # 1 265 1 265 265 346 89.0 3e-95 MEITTLQIVLIFIVACIAGMGSILDEFQFHRPLVACTLIGIVLGDMKTGIIIGGTLEMIA LGWMNIGAAVAPDAALASIISTILVIAGGQSVGAGIALAIPLAAAGQVLTIIVRTITVGF QHAADGAAERGDLRAISVLHCSALILQAMRIAIPAVVVAISVGTDAVHTMLNAIPEVVTS GLAIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVLGLMMAILYIQ LSPKYNKSQVVQVAAGNNDLDNELD >gi|316919811|gb|ADCU01000007.1| GENE 74 74952 - 75815 846 287 aa, chain + ## HITS:1 COG:YPO1756 KEGG:ns NR:ns ## COG: YPO1756 COG3716 # Protein_GI_number: 16122012 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Yersinia pestis # 14 286 22 294 295 487 89.0 1e-138 MVDTTSSVATPKTETKLTAGDLRGVFLRSNLFQGSWNFERMQALGFCFSMVPVIRRLYPE NTDERKQAIKRHLEFFNTHPYVAAPILGVTAAMEEQRANGAPIDDGAINGIKVGLMGPLA GVGDPIFWGTVRPVFAALGAGIAMTGSLLGPVLFFVLFNLVRLLVRYYGVAYGYKKGVDI VGDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSRITDQTGHTTVTTVQTILD QLMPGLIPLLLTFGCMWLLRKKVNALWIIIGFFFIGIFGYWIGLLSL >gi|316919811|gb|ADCU01000007.1| GENE 75 75879 - 76337 413 152 aa, chain + ## HITS:1 COG:YPO1755 KEGG:ns NR:ns ## COG: YPO1755 COG4811 # Protein_GI_number: 16122011 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 152 1 152 153 175 62.0 3e-44 MSLTDIALLAFILLFLLYATYDEFIMPKRNGKTLLQVNLKRRNKADSGIFVGLLAILAYQ NITNNGSNFTTWLLFTLAIIAIYVFYIRWPKILFKDSGFYYGNVFILYSRIKNMNMSEDG YLVIDLEKRRLLIQVAKMDDLEQILKFFVEHK >gi|316919811|gb|ADCU01000007.1| GENE 76 76734 - 77306 593 190 aa, chain + ## HITS:1 COG:ECs2531 KEGG:ns NR:ns ## COG: ECs2531 COG1971 # Protein_GI_number: 15831785 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 185 19 203 206 253 74.0 2e-67 MNLSATVILAFGMSMDAFAASIGKGAALHKPRFREAIRTGLIFGVVEAITPLIGWGIGLL ASQFIMEWDHWVAFALLFVLGSRMVYEGWKGNQDEGAEPVRRHGFWLLVTTAIATSLDAM AIGVGLAFLQVNILHTAMAIGLATMIMATLGMMIGRFIGPLLGKRAEILGGVVLIGIGFT ILYEHIGPFF >gi|316919811|gb|ADCU01000007.1| GENE 77 77358 - 78170 470 270 aa, chain - ## HITS:1 COG:YPO1748 KEGG:ns NR:ns ## COG: YPO1748 COG0500 # Protein_GI_number: 16122005 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Yersinia pestis # 1 268 1 269 279 351 63.0 7e-97 MPYQCPLCQQSLEKNDHQWRCANNHQFDCAKEGYVNLMPVQFKHSKQPGDSAEMMQARRA FLDQNYYQPLRNAVCAALDTHMPAQTHRILDIGCGEGYYTAEVAKQFNQRNIDVYGLDIA KVAIRYAAKRYPTVSFCVASSHRLPYADASMDAVVRIYAPCKAEELARVIAPEGILVTVS PAPRHLYQLKAQVYDSVQLHAENVEEFAGFTLIDDRQLSYTMQLPGEQAANLLQMTPFAW RATPDVAARLKNCAEFDCETDFAIRVYQHL >gi|316919811|gb|ADCU01000007.1| GENE 78 78341 - 79048 386 235 aa, chain + ## HITS:1 COG:YPO1747 KEGG:ns NR:ns ## COG: YPO1747 COG1496 # Protein_GI_number: 16122004 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 3 235 5 251 251 263 51.0 3e-70 MENPRLEDIAAIRYGFGHKTALMPSALVPFRASMPEKKQVHGIRVVDVVTPAQQCGECDA LYTREPDILLTILTADCLPVIFSHKDGSAIAVAHAGWRGLLDGVLEQVAARIAQDDDVAN WVAAIGPSAGTCCYEVDEPLVERFQQELPYDPSLISPRFRHLDLVSIAQAKLNGLGFANV ENQSECTICTPENQPEAKNYFRYTSFRRNAHRREKEPEHPGIKGRNQYSGLIILP >gi|316919811|gb|ADCU01000007.1| GENE 79 79117 - 79326 253 69 aa, chain - ## HITS:1 COG:YPO1746 KEGG:ns NR:ns ## COG: YPO1746 COG1278 # Protein_GI_number: 16122003 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Yersinia pestis # 1 69 1 69 69 119 97.0 1e-27 MAKIKGQVKWFNEAKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQHVEFEIQDGQKG PSAVNVTAI >gi|316919811|gb|ADCU01000007.1| GENE 80 80238 - 80843 478 201 aa, chain + ## HITS:1 COG:no KEGG:plu2784 NR:ns ## KEGG: plu2784 # Name: pagP # Def: palmitoyl transferase # Organism: P.luminescens # Pathway: not_defined # 15 201 21 207 207 234 60.0 1e-60 MNLVKSGRSYIGCLSLLASFAVLAQEPSTTNKTQASPAPSSQSKGFWGTFTDQVKQTWDA DNYELYVPLNTWHNRAMYDKEKTDKYNERPWGAGFGVYRYDENDNWHSLYAMAFKDSHNK IEPIVGYGFEWMWIPGDRDGWRFGAGYTASITARDDYSYIPIPIVLPLVSIEYNRFSVQT TYIPGTYNNGNVLFTWMRWQF >gi|316919811|gb|ADCU01000007.1| GENE 81 80914 - 81888 909 324 aa, chain - ## HITS:1 COG:YPO2219 KEGG:ns NR:ns ## COG: YPO2219 COG0583 # Protein_GI_number: 16122448 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 324 1 324 324 612 95.0 1e-175 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT PAGQEIIRIAREVLSKVDAIKAVAGEHTYPDKGSLYVATTHTQARYALPPVIKGFIERYP RVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLIMLPCYHWNRAVVVKPDHPLAG KTSITIEELAEYPIVTYTFGFTGRSELDTAFNRAGLTPKIVFTATDADVIKTYVRLGLGV GVIANMAVDPVQDPDLVTVDTSDIFTYSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV DTAVALRSNEEIEAMFKDIKLPIK >gi|316919811|gb|ADCU01000007.1| GENE 82 82320 - 84917 2454 865 aa, chain - ## HITS:1 COG:YPO2218_1 KEGG:ns NR:ns ## COG: YPO2218_1 COG0550 # Protein_GI_number: 16122447 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Yersinia pestis # 1 592 1 598 598 999 84.0 0 MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKGAASAENKAKPKVK KNEREALVNRMGVDPYHGWKAHYEILPGKEKVVAELKTLAEKADHIYLATDLDREGEAIA WHLREVIGGDESRYSRVVFNEITKNAIQQAFNKPGELNIDRVNAQQARRFMDRVVGYMVS PLLWKKIARGLSAGRVQSVAVRLVVDREREIKAFVPEEYWELRADLNDKNAVALQMQVTH HNDKPFKPVNGEQTQTAVKALEKARYTVLDREDKPTSSKPSAPFITSTLQQAASTRLGFG VKKTMMMAQRLYEAGHITYMRTDSTNLSQDAVNMVREYIGENFGEKYMPKEPNTYASKDN SQEAHEAIRPSDVNVLSEQLKDMEADAQKLYQLIWRQFVSCQMTPAKYDSTTISVKAGDY TLKAKGRTLRFDGWTKVLPQLRKGDEDRTLPFVEVGSDLTLQQLLPSQHFTKPPARFSEA SLVKELEKRGIGRPSTYAAIISTIQDRGYVRVDNRRFYAEKMGEIVTDRLEENFRELMNY DFTAHMEDGLDQVANAKEDWKNVLDGFFQDFSKQLSVAEKDPEDGGMRPNQMVLTSIACP TCGRQMGIRTASTGVFLGCSGYALPPKERCKTTINLVPEAEVLNVLEGDDAETNALRAKR RCAKCGTAMDSYLIDNQRKLHVCGNNPACDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL KMGRFGKYMACTNDECKNTRKILRNGDVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF LAANTFPKSRETRAPLVEELARFKDRLPEKLSYLADAPQKDPEGNKTMVRFSRKTKQQYV SSEKDGKATGWTAFFVDGKWVETKK >gi|316919811|gb|ADCU01000007.1| GENE 83 85353 - 85604 317 83 aa, chain + ## HITS:1 COG:no KEGG:ETAE_1551 NR:ns ## KEGG: ETAE_1551 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 83 1 83 83 131 81.0 8e-30 MFGETTPIKREALLAEANQIIKEHEDYMQGMEATEVEQKGDVLVFRGEFFLDEDGIPTRK TTAVFNMFKHLAHVLSEKYHLED >gi|316919811|gb|ADCU01000007.1| GENE 84 85684 - 86688 842 334 aa, chain - ## HITS:1 COG:YPO2216 KEGG:ns NR:ns ## COG: YPO2216 COG0616 # Protein_GI_number: 16122444 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Yersinia pestis # 1 331 15 345 348 479 74.0 1e-135 MTFVIAIGALIVLFVSLRHKKGASRGELQLTDLGEQYRDMQRSMQEARMDDSSLKAWYKL QKKQDKEKAKQRKAEAKQGIAAKEKPCLYVLDFKGSMDAHEVSSLREEISAVLAVAKQGD EVLLRLESPGGVVHGYGLAASQLQRLRQAGVRLTVAVDKVAASGGYMMACVADRIVAAPF AIIGSIGVVAQIPNFNRWLKKNDIDVELHTAGEFKRTLTLLGENTEQGREKFREELNETH ALFKSFVSQQRPSLDIDSVATGEHWYGIQAKDKGLVDSVGTSDDLLIAEMENHDVIGVRY TRRKRMMDRFTNSAAESADRLMLRWWQRSQRHDI >gi|316919811|gb|ADCU01000007.1| GENE 85 87017 - 87778 613 253 aa, chain + ## HITS:1 COG:YPO2215 KEGG:ns NR:ns ## COG: YPO2215 COG1028 # Protein_GI_number: 16122443 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Yersinia pestis # 1 253 1 253 253 363 75.0 1e-100 MHYQPQPELLHNRIILVTGAGDGIGREAALTYARHGAQLILLGRTLSKLQAVKQEIHQLG LAPAATVEFDLLTAAPADYQKLADELAAAYPHLDGVLNNAGLLGTINPLAEQDYQEFCDV MQVNVNASLLLTQAVLPLLLKSPSASLIFTSSSVGRTGRAGWGAYAISKFATEGMMQVLA DEYKNTHLRVNCINPGGTRTSMRASAFPDEDPHKLKTPADIMPLYLYLMGDDSRRKTGMS FDAQPGRKPGPAE >gi|316919811|gb|ADCU01000007.1| GENE 86 87848 - 88438 514 196 aa, chain + ## HITS:1 COG:YPO2214 KEGG:ns NR:ns ## COG: YPO2214 COG2109 # Protein_GI_number: 16122442 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Yersinia pestis # 1 196 1 196 196 313 76.0 1e-85 MSEDRHQQRQQRIKEKVDARIAAAQETRGIVMIFTGNGKGKSTAAFGTVARAVGHGHRAG VIQFIKGTWENGERNLLEPHGVEFQVMATGFTWETQNKETDTAAAVAVWEHGKRMLKDET LDLVVMDELTYMVSYGYIELEEVLTALQQRPAHQSVIITGRGCHRELEALADTVSEVRPV KHAFESGIKAQKGIDW >gi|316919811|gb|ADCU01000007.1| GENE 87 88492 - 89094 484 200 aa, chain - ## HITS:1 COG:phpB KEGG:ns NR:ns ## COG: phpB COG0406 # Protein_GI_number: 16128621 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Escherichia coli K12 # 1 194 1 195 203 190 47.0 1e-48 MELYLVRHGQTQANLDGVYCGSSDLALTSLGEQQAKAVEAQLASLSFDAVYTSRLQRTQQ TARHILGAEAEFIPHAGLDEMAFGEWELRHHRELQEKDAENYAAWCADWQRTVPPGGEGF RDFSARVRHALAEIQQRHAKQRVLIVAHQGVLSLICTQLLQLEARAMWHFRIEQGCHSRI DYRDGFSVIYCLNNSGKASS >gi|316919811|gb|ADCU01000007.1| GENE 88 89131 - 89868 877 245 aa, chain - ## HITS:1 COG:cobS KEGG:ns NR:ns ## COG: cobS COG0368 # Protein_GI_number: 16129933 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin-5-phosphate synthase # Organism: Escherichia coli K12 # 2 245 3 247 247 211 48.0 1e-54 MKLFLATLQFMTRIPVPARWTDNLDMNDYAKGVVYFPFVGLIVGLLSALAFAVILPVYGP LLAAVAAVLATTLVTGAFHLDGLADTCDGIFSARPRERILEIMRDSRIGSNGALALIFVI VARILIIYQLTQTGHNVYTLLVAAPALSRALLPVLMYQQKYARENGMGNLYIGKIGGQHY VIALVIGLLMTLGFANWHGGLAAIITYLFALLYRGFINKRIGGQTGDTLGAGNELFGLVF LFAVI >gi|316919811|gb|ADCU01000007.1| GENE 89 90029 - 90982 1000 317 aa, chain - ## HITS:1 COG:ECs1841 KEGG:ns NR:ns ## COG: ECs1841 COG1187 # Protein_GI_number: 15831095 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 296 1 290 290 449 81.0 1e-126 MSEKLQKVLANAGHGSRREIEAMIKEGRVSVDGKLATLGDRVEVTPAMKIRVDGRVVSIR ESTESVCRVLAYYKPEGELCTRRDPEGRPTVFDRLPKLRGSRWIAVGRLDINTSGLLLFT TDGELANRLMHPSREVEREYAVRVFGQVDDEKIRQLSRGVQLEDGPASFKTISFQGGEGI NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDLPLPKGLPRGGWAELPLNDINYL RELVELDAETVSKLPVERERRRMKANQIRRAVKRHGQGGSAAAAAPNRRSGSANKGTSST RGSAANKGTSNRGAKRG >gi|316919811|gb|ADCU01000007.1| GENE 90 91143 - 91301 114 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIKYCGINSAVSEFSGCIVEELADEALDDPPDCLPKEAQCQGIGGKRLALGK >gi|316919811|gb|ADCU01000007.1| GENE 91 91668 - 94922 1525 1084 aa, chain + ## HITS:1 COG:Z0402_2 KEGG:ns NR:ns ## COG: Z0402_2 COG3468 # Protein_GI_number: 15800037 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 EDL933 # 610 1083 7 478 478 476 57.0 1e-133 MAANAVYYNDSSTLSSGTWSGKNNGNIIGGGDGNSGHLNLSGTSEYSDISAVGFDGAIGT LTINESSKSTGDINLFKVGSATASELSSNTDGTLNIVGPSTGNINFLGLRIGDTSVYDRY TVRDKSVTGAVNILDGATVNIGATSQSSWDASNNVMWIGSGNAANTGILNISGEGSSLSL INKKIEESSYYDDSMVNGDAYLGYLGHAVVNVTNGGTFTAGRIVASFLRKSDIADNLAKL STTDITVNGKNSKIVVQSLMALASNVGGRIYDIDFSDSLQGVGKATLTVEDGGEVNFEGK SYIADDGYEVATSGLFLASDQKSDATVNLNHGGTISISNSVLSSEEDGIIAGLGKYAFNL NGGTLRVNSCKYCDNQLTTSVDMNVLSVSFLEADENKSMSLKGNLIGAGGIVKNGTGTVI LSGKNNYLGGTRVEAGELRSENHDAFVNNTAYIINGGMLNQNSHDLVMSSLSGAGGIANV TDASLIINQNNNSYFAGEFTGSGTIEKIGNAQLALSGDSSKFSGITTVSAGNLDSTKALG GHIIVKKDALLSATGLLGATDVLSGANLIVGSLYQGNSPKISALTIDGSIKNTGNVFIGG LDNNRQSMVGNRLIVNGDYHGGGSLYFNTVLGDDNSQTDHLSIAGDTNGNTTVYVKNVGG NGDYTQKGIELINVLGESNGNFVQGSRIVAGSYDYFLQRGNHGNGTDEKSWYLTNFKPAP IPEPKPDPEPIPDPEPVPDPKPTPEPEPNPQPRPKPTVRPEAGGYAHNIAAANSLFILRL HDRLGETYYTDVFTGEQKVTSMWMRHAAGHTQSRDSSGQLQTQANRYVMQLGGDIAQWSR NESDRWHLGLMAGYGNSHNNTRSSVTNYRADSSISGYSLGAYGTWQQNEGENTGAYVDTW ALYNWFNNKVKGQDLSGESYQSKGWTVSVETGYTYKLNEFTGSHGSLNSWFIQPQAQIVW MGVTADSHTESNGTPVSSYGDGNLLTRLGIRSFMKGHHKMDDNKGNEFEPFIEVNWLHNT KSFGTKMGDTKIEQAGTKNIGEIKVGVESQIKTSLNLWGNIAAQVGDQGYNDSLFMVGIK YNFK >gi|316919811|gb|ADCU01000007.1| GENE 92 94982 - 95413 165 143 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKNGRFYLKEKSRKLNESLKPEPHPLIVFVKSWDFIGKLSLSSISLGYIIYSLCDNAEL HRTAIVIMGITIALYPFAKKMTDDGLRHSVSKKSFEIIHGTGSRNFGLIYAFLVMVAAIP LGCVYLLYHLIKYRKSLSVGKPS >gi|316919811|gb|ADCU01000007.1| GENE 93 95690 - 96526 205 278 aa, chain - ## HITS:1 COG:ECs2447 KEGG:ns NR:ns ## COG: ECs2447 COG0322 # Protein_GI_number: 15831701 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Escherichia coli O157:H7 # 8 278 17 287 295 350 60.0 2e-96 MSMLDEDMYQYPEHLKLELAALPAKPGVYIFHGTSKTMPLYIGKSVNIRSRVMSHFRNKN EAKLLHLTTHIKHIEMAGELGALLTEARLIKEQKPLFNKRLRHAKQLCSLSLQPRGVEIV YAGDTHFSHKAQLFGLFSNKSSALETLRAVADQQRLCYGVLGLERLAQGRSCFRYSLKRC AGACCGKESLEEHQLRLEQAMESIRVQCWPYDGKIAVEESCDGFTQYHIINNWFYLGSVE NLQEAKSMHSTAACFDRDGYKILCKPLLSGAFKVIALD >gi|316919811|gb|ADCU01000007.1| GENE 94 96920 - 97222 252 100 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_1701 NR:ns ## KEGG: NT01EI_1701 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 6 85 7 86 98 81 57.0 8e-15 MSNNHSQTRTQRMRSALQGQMQYWKMYLALKSRQMGLSGRMRQMTLIISAVMMVALLMAG FVLFNLVVLSVSLVGALTSLFRPRQRPGHRTFTQQSPRVM >gi|316919811|gb|ADCU01000007.1| GENE 95 97509 - 100448 2543 979 aa, chain - ## HITS:1 COG:ECs0362_2 KEGG:ns NR:ns ## COG: ECs0362_2 COG3468 # Protein_GI_number: 15829616 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 447 979 3 537 537 528 58.0 1e-149 MESLPDIAYTDGSSFENKLLGNGDTTVSGNAQITGVNDTYAGNWNITGKAATDKTVSSTL SNFGSGNINVESDGYLIANSTGEFTFENKLSGTGYVVADNNGSEFTFSTATGTDFAGDVI LNNNLFALEGDNSAALTHATLHIGSGNETSVGTGNQNLGGLAFDGGTLVFGDVNPGDTTS DRFIETTQDLNLTGKGQIQITDGGDFENTVQHPDTTLPLLQQDDMGGMVKLADSQGTVTG TGGNLSLIDQNGTVISQKVTSQITQNGETVANGEYDYRLTSGENNDGLYINYGLTQVELL AQGDNALTLSAEGNTGNAADLSAKIIGAGDLRIDTDTDLSLSNSDNNYTGMTDVVAGTLK MGNDNVLGQTRLLNLNSGSQFDMNGYAQTLQNLQTDAGSTLDFNQGSLTVNNGTVDGNMS GAGSLTVAGGTLTVSSDNAAMSADTTIASDGVIRMLSSQALGTGSVNNQGLLYLGQDGDS HVTRDTLTNYQTGALTNSGTVVIGHNDASGQAIAGTTLTVNGNYTGENGHLQFNTVLGDD SSATDKLIVTGDTSGDTGVSVKNAGGVGDKTLNGIELISVGGQSDGTFTQEGRIVAGAYD YALVRGQGSNQGNWYLTSQTSPIDPVDPPIDPVDPPIDPVDPPVTPPGGGEHVNRPEGGS YIANLAAANTLFNTRLHDRLGETQYVDALTGEKKVTSLWLRQVGGHNNWRDSSGQLKTQS NSYVAQLGGDVAQWSTDGLNRGHLGLMTGYANSHNQTHSSVTGYDSKGSINGYSAGVYGT WFANDADKSGLYVDSWLQYSWFNNHVNGEQLASESYKSKGLTASLETGYTLKMGEFTGSQ GTLNEWFIQPQAQATWMGVKADKHREDNGTRVNSEGDGNVQTRLGMRAYLKSHHAMDEGK GRTFEPFIEANWLHNTRSYSAKMDDVRISQAGARNIGEVKVGVEGQINPRLNLWGNVGTQ VGDKGYNDSTAMIGVKYNF >gi|316919811|gb|ADCU01000007.1| GENE 96 100450 - 100716 147 88 aa, chain - ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 88 80 167 167 171 100.0 3e-43 MATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARL GRKSLSFSKSVELHDKVIGHYLNIKHYQ Prediction of potential genes in microbial genomes Time: Wed May 18 14:58:10 2011 Seq name: gi|316919538|gb|ADCU01000008.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.8, whole genome shotgun sequence Length of sequence - 291626 bp Number of predicted genes - 280, with homology - 262 Number of transcription units - 162, operones - 55 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 134 - 349 68 ## SbBS512_E3230 putative IS1 encoded protein + Prom 672 - 731 8.3 2 2 Tu 1 . + CDS 937 - 1161 260 ## NT01EI_1700 hypothetical protein 3 3 Tu 1 . - CDS 1187 - 1939 269 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 1966 - 2025 3.7 + Prom 1906 - 1965 4.4 4 4 Op 1 . + CDS 2067 - 2489 329 ## COG2207 AraC-type DNA-binding domain-containing proteins 5 4 Op 2 . + CDS 2508 - 3617 699 ## COG0471 Di- and tricarboxylate transporters + Term 3644 - 3677 6.1 - Term 3632 - 3665 6.1 6 5 Tu 1 . - CDS 3671 - 4909 1190 ## YPDSF_2083 hypothetical protein - Prom 5018 - 5077 2.4 + Prom 5163 - 5222 4.6 7 6 Op 1 31/0.000 + CDS 5422 - 6192 959 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 8 6 Op 2 . + CDS 6324 - 7019 645 ## COG0765 ABC-type amino acid transport system, permease component + Term 7029 - 7076 5.7 - Term 7081 - 7111 2.0 9 7 Op 1 . - CDS 7243 - 8265 555 ## gi|188026219|ref|ZP_02961315.2| hypothetical protein PROSTU_03336 10 7 Op 2 . - CDS 8345 - 9289 460 ## COG4461 Uncharacterized protein conserved in bacteria, putative lipoprotein - Prom 9451 - 9510 12.1 - Term 9665 - 9717 8.2 11 8 Tu 1 . - CDS 9859 - 10704 298 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 10899 - 10958 5.8 + Prom 10780 - 10839 5.5 12 9 Op 1 2/0.517 + CDS 10983 - 12380 1163 ## COG2211 Na+/melibiose symporter and related transporters 13 9 Op 2 . + CDS 12414 - 14399 1492 ## COG3533 Uncharacterized protein conserved in bacteria + Term 14584 - 14639 6.5 14 10 Tu 1 . - CDS 15071 - 15316 319 ## Spro_2831 hypothetical protein - Term 15338 - 15370 3.4 15 11 Op 1 6/0.155 - CDS 15378 - 15998 731 ## COG0009 Putative translation factor (SUA5) 16 11 Op 2 . - CDS 16055 - 16939 581 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) - Prom 17165 - 17224 5.1 17 12 Op 1 35/0.000 + CDS 17392 - 18954 1403 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 18 12 Op 2 13/0.000 + CDS 18954 - 19532 571 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 19 12 Op 3 21/0.000 + CDS 19615 - 20649 961 ## COG0547 Anthranilate phosphoribosyltransferase 20 12 Op 4 13/0.000 + CDS 20652 - 22052 1133 ## COG0134 Indole-3-glycerol phosphate synthase 21 12 Op 5 37/0.000 + CDS 22150 - 23340 1274 ## COG0133 Tryptophan synthase beta chain 22 12 Op 6 1/0.638 + CDS 23340 - 24146 383 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc + Term 24167 - 24203 2.2 + Prom 24151 - 24210 9.3 23 13 Tu 1 . + CDS 24334 - 24648 365 ## COG2823 Predicted periplasmic or secreted lipoprotein + Term 24659 - 24705 11.0 - Term 24658 - 24683 -0.5 24 14 Tu 1 . - CDS 24780 - 25430 695 ## COG3047 Outer membrane protein W - Prom 25547 - 25606 4.5 + Prom 25601 - 25660 6.4 25 15 Op 1 . + CDS 25706 - 26122 175 ## COG0727 Predicted Fe-S-cluster oxidoreductase 26 15 Op 2 . + CDS 26241 - 26993 844 ## Spro_2675 hypothetical protein + Term 27040 - 27078 7.6 - Term 27023 - 27071 10.7 27 16 Tu 1 . - CDS 27109 - 27897 941 ## COG1414 Transcriptional regulator - Prom 27936 - 27995 5.2 28 17 Tu 1 . + CDS 28120 - 29496 1196 ## COG0477 Permeases of the major facilitator superfamily - Term 29497 - 29528 4.1 29 18 Tu 1 . - CDS 29596 - 29925 236 ## YE1874 putative DNA-binding protein - Prom 29957 - 30016 4.2 + Prom 29987 - 30046 6.5 30 19 Op 1 . + CDS 30234 - 30779 214 ## 31 19 Op 2 . + CDS 30785 - 31309 414 ## COG5295 Autotransporter adhesin 32 19 Op 3 . + CDS 31376 - 31792 432 ## YE1871 putative lipoprotein + Term 31801 - 31842 4.8 - Term 31789 - 31828 0.6 33 20 Tu 1 . - CDS 31846 - 32496 653 ## COG0307 Riboflavin synthase alpha chain + Prom 32620 - 32679 4.7 34 21 Tu 1 . + CDS 32867 - 34237 1197 ## COG0534 Na+-driven multidrug efflux pump + Term 34291 - 34319 2.3 + TRNA 34456 - 34532 89.8 # Val GAC 0 0 + TRNA 34553 - 34629 89.8 # Val GAC 0 0 + TRNA 34651 - 34727 89.8 # Val GAC 0 0 35 22 Tu 1 . - CDS 34855 - 36465 876 ## Nmul_A0920 tyrosinase - Prom 36494 - 36553 4.3 36 23 Tu 1 . + CDS 37067 - 38479 1624 ## COG0469 Pyruvate kinase + Term 38504 - 38534 4.1 + Prom 38519 - 38578 7.2 37 24 Tu 1 . + CDS 38783 - 39019 282 ## COG4238 Murein lipoprotein + Prom 39203 - 39262 4.5 38 25 Tu 1 . + CDS 39461 - 39697 247 ## COG4238 Murein lipoprotein + Term 39721 - 39749 3.0 - Term 39847 - 39880 2.0 39 26 Tu 1 . - CDS 39922 - 40923 1031 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 41011 - 41070 5.2 + Prom 41043 - 41102 5.2 40 27 Tu 1 . + CDS 41299 - 42732 967 ## COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein - Term 42683 - 42719 2.0 41 28 Tu 1 . - CDS 42729 - 44345 1474 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 44504 - 44563 3.6 42 29 Tu 1 . + CDS 44538 - 45257 513 ## COG2866 Predicted carboxypeptidase 43 30 Tu 1 . - CDS 45267 - 46232 870 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 46395 - 46454 2.8 + Prom 46314 - 46373 4.9 44 31 Tu 1 . + CDS 46405 - 46908 547 ## COG2077 Peroxiredoxin + Term 46933 - 46969 5.3 - Term 46916 - 46962 10.9 45 32 Tu 1 . - CDS 46967 - 48553 1610 ## COG3283 Transcriptional regulator of aromatic amino acids metabolism - Prom 48585 - 48644 4.7 + Prom 48741 - 48800 3.5 46 33 Op 1 . + CDS 48885 - 49427 512 ## Spro_1873 hypothetical protein 47 33 Op 2 . + CDS 49488 - 50330 714 ## COG2897 Rhodanese-related sulfurtransferase 48 34 Op 1 . - CDS 50434 - 51144 391 ## YPDSF_0645 hypothetical protein 49 34 Op 2 . - CDS 51141 - 53294 1612 ## PC1_0134 hypothetical protein - Prom 53364 - 53423 7.0 - Term 53529 - 53560 -0.7 50 35 Op 1 9/0.000 - CDS 53595 - 54656 924 ## COG3768 Predicted membrane protein 51 35 Op 2 . - CDS 54653 - 56050 890 ## COG3106 Predicted ATPase 52 35 Op 3 . - CDS 56072 - 56323 290 ## 53 35 Op 4 . - CDS 56354 - 56713 317 ## COG1983 Putative stress-responsive transcriptional regulator 54 35 Op 5 . - CDS 56713 - 56940 305 ## ETAE_1865 phage shock protein B - Prom 56990 - 57049 1.7 55 36 Tu 1 . - CDS 57065 - 57730 896 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription - Prom 57859 - 57918 4.0 + Prom 57857 - 57916 5.5 56 37 Tu 1 . + CDS 57953 - 58954 743 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain + Prom 59089 - 59148 3.4 57 38 Op 1 8/0.017 + CDS 59322 - 61109 1522 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 58 38 Op 2 8/0.017 + CDS 61106 - 62071 606 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 59 38 Op 3 8/0.017 + CDS 62058 - 62948 863 ## COG4171 ABC-type antimicrobial peptide transport system, permease component 60 38 Op 4 8/0.017 + CDS 62957 - 63952 483 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 61 38 Op 5 . + CDS 63949 - 64761 455 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Prom 64848 - 64907 4.6 62 39 Tu 1 . + CDS 65036 - 65824 832 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) + Term 65848 - 65888 5.3 + Prom 65832 - 65891 5.0 63 40 Op 1 . + CDS 66028 - 67137 595 ## COG4950 Uncharacterized protein conserved in bacteria + Prom 67165 - 67224 1.9 64 40 Op 2 . + CDS 67277 - 69217 1792 ## COG4776 Exoribonuclease II + Term 69226 - 69273 13.1 + Prom 69405 - 69464 3.5 65 41 Op 1 4/0.362 + CDS 69573 - 70160 686 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 66 41 Op 2 . + CDS 70170 - 70496 337 ## COG1359 Uncharacterized conserved protein + Term 70631 - 70661 4.3 - Term 70414 - 70456 7.0 67 42 Tu 1 . - CDS 70660 - 71892 1308 ## COG2195 Di- and tripeptidases + Prom 72382 - 72441 4.4 68 43 Op 1 30/0.000 + CDS 72594 - 73733 1135 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 69 43 Op 2 36/0.000 + CDS 73717 - 74577 637 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 70 43 Op 3 . + CDS 74574 - 75359 715 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II + Term 75378 - 75420 3.9 + Prom 75497 - 75556 4.9 71 44 Tu 1 1/0.638 + CDS 75690 - 76979 1179 ## COG0531 Amino acid transporters + Term 76989 - 77037 9.4 + Prom 77045 - 77104 3.5 72 45 Tu 1 . + CDS 77211 - 78275 1021 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Term 78314 - 78354 11.1 - Term 78302 - 78342 7.1 73 46 Tu 1 . - CDS 78395 - 79444 943 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes - Prom 79620 - 79679 2.9 - Term 79729 - 79762 5.1 74 47 Op 1 2/0.517 - CDS 79795 - 80337 495 ## COG3150 Predicted esterase - Term 80347 - 80376 -0.3 75 47 Op 2 5/0.259 - CDS 80408 - 81427 876 ## COG1472 Beta-glucosidase-related glycosidases 76 47 Op 3 6/0.155 - CDS 81504 - 82382 423 ## COG0510 Predicted choline kinase involved in LPS biosynthesis 77 47 Op 4 6/0.155 - CDS 82387 - 82986 509 ## COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) 78 47 Op 5 4/0.362 - CDS 83017 - 83406 315 ## COG5633 Predicted periplasmic lipoprotein 79 47 Op 6 . - CDS 83462 - 83812 443 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - Prom 83853 - 83912 2.9 - Term 83954 - 83996 8.4 80 48 Op 1 44/0.000 - CDS 84020 - 85024 848 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 81 48 Op 2 44/0.000 - CDS 85021 - 86010 588 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 82 48 Op 3 49/0.000 - CDS 86022 - 86930 1029 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 83 48 Op 4 21/0.000 - CDS 86946 - 87866 789 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 88002 - 88061 2.3 - Term 88065 - 88099 -1.0 84 48 Op 5 4/0.362 - CDS 88118 - 89755 1712 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Term 90518 - 90554 2.4 85 49 Tu 1 . - CDS 90582 - 91229 456 ## COG2095 Multiple antibiotic transporter - Prom 91427 - 91486 5.1 86 50 Tu 1 . + CDS 91810 - 94479 2850 ## COG1454 Alcohol dehydrogenase, class IV + Term 94496 - 94534 8.6 - Term 94771 - 94808 5.9 87 51 Tu 1 . - CDS 94851 - 95396 493 ## COG1435 Thymidine kinase - Prom 95573 - 95632 5.9 + Prom 95959 - 96018 4.8 88 52 Tu 1 . + CDS 96046 - 96453 625 ## COG2916 DNA-binding protein H-NS + Term 96490 - 96519 1.4 - Term 97168 - 97210 6.3 89 53 Tu 1 . - CDS 97237 - 98088 751 ## COG1210 UDP-glucose pyrophosphorylase - Prom 98278 - 98337 4.2 90 54 Tu 1 . - CDS 98370 - 99386 651 ## COG0784 FOG: CheY-like receiver - Prom 99483 - 99542 2.9 + Prom 99540 - 99599 4.7 91 55 Op 1 4/0.362 + CDS 99630 - 100127 265 ## COG3012 Uncharacterized protein conserved in bacteria 92 55 Op 2 . + CDS 100177 - 101025 792 ## COG0788 Formyltetrahydrofolate hydrolase + Term 101212 - 101278 31.6 + TRNA 101180 - 101264 69.7 # Tyr GTA 0 0 + TRNA 101349 - 101433 69.7 # Tyr GTA 0 0 - Term 101331 - 101389 3.8 93 56 Tu 1 . - CDS 101441 - 101776 66 ## + Prom 101690 - 101749 2.8 94 57 Tu 1 . + CDS 101775 - 102344 556 ## COG1611 Predicted Rossmann fold nucleotide-binding protein + Term 102354 - 102390 3.0 + Prom 102401 - 102460 4.1 95 58 Op 1 2/0.517 + CDS 102482 - 103291 701 ## COG0708 Exonuclease III 96 58 Op 2 . + CDS 103297 - 103719 378 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 103726 - 103788 8.9 97 59 Op 1 . - CDS 103781 - 104080 331 ## NT01EI_1651 hypothetical protein 98 59 Op 2 . - CDS 104077 - 105996 1442 ## COG0550 Topoisomerase IA 99 59 Op 3 1/0.638 - CDS 105996 - 107129 932 ## COG2603 Predicted ATPase 100 59 Op 4 6/0.155 - CDS 107129 - 108172 969 ## COG0709 Selenophosphate synthase - Prom 108273 - 108332 5.6 - Term 108337 - 108396 -0.6 101 60 Tu 1 . - CDS 108397 - 108945 528 ## COG0778 Nitroreductase - Prom 109039 - 109098 4.2 + Prom 109294 - 109353 4.4 102 61 Op 1 . + CDS 109373 - 109954 421 ## COG0616 Periplasmic serine proteases (ClpP class) 103 61 Op 2 4/0.362 + CDS 109909 - 111222 1184 ## COG0616 Periplasmic serine proteases (ClpP class) + Prom 111281 - 111340 7.5 104 62 Op 1 2/0.517 + CDS 111397 - 112413 932 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 105 62 Op 2 . + CDS 112450 - 113085 502 ## COG1335 Amidases related to nicotinamidase + Term 113117 - 113153 -0.7 - Term 113105 - 113141 3.1 106 63 Op 1 3/0.414 - CDS 113157 - 113432 300 ## COG3139 Uncharacterized protein conserved in bacteria 107 63 Op 2 . - CDS 113507 - 113920 299 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase - Prom 113971 - 114030 7.3 + Prom 114202 - 114261 6.0 108 64 Op 1 4/0.362 + CDS 114403 - 115398 995 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 115416 - 115455 7.5 109 64 Op 2 . + CDS 115481 - 116368 813 ## COG0676 Uncharacterized enzymes related to aldose 1-epimerase + Term 116394 - 116426 3.0 - Term 116380 - 116412 3.0 110 65 Tu 1 . - CDS 116450 - 117193 700 ## COG3713 Outer membrane protein V - Prom 117231 - 117290 4.8 + Prom 117365 - 117424 6.8 111 66 Op 1 12/0.000 + CDS 117665 - 119599 1747 ## COG2766 Putative Ser protein kinase 112 66 Op 2 . + CDS 119705 - 120982 945 ## PROTEIN SUPPORTED gi|163739530|ref|ZP_02146940.1| 50S ribosomal protein L34 + Term 120993 - 121037 6.0 + Prom 121043 - 121102 1.8 113 67 Tu 1 . + CDS 121142 - 122917 1294 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components + Term 122925 - 122966 10.2 - Term 122910 - 122953 6.5 114 68 Tu 1 . - CDS 122977 - 124092 1140 ## COG3203 Outer membrane protein (porin) - Prom 124335 - 124394 5.5 + Prom 124369 - 124428 4.1 115 69 Tu 1 . + CDS 124576 - 124830 328 ## NT01EI_1634 hypothetical protein 116 70 Tu 1 . - CDS 124843 - 125082 233 ## COG5645 Predicted periplasmic lipoprotein - Prom 125196 - 125255 5.7 117 71 Op 1 . + CDS 125418 - 125633 324 ## ETAE_1475 hypothetical protein + Term 125648 - 125685 2.1 118 71 Op 2 . + CDS 125698 - 126267 366 ## Spro_2743 endodeoxyribonuclease 119 71 Op 3 . + CDS 126321 - 127520 923 ## COG0477 Permeases of the major facilitator superfamily + Term 127535 - 127576 6.1 - Term 127523 - 127562 4.4 120 72 Op 1 . - CDS 127595 - 128665 623 ## COG0787 Alanine racemase 121 72 Op 2 . - CDS 128811 - 130115 1100 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 130168 - 130227 6.5 + Prom 130587 - 130646 3.0 122 73 Tu 1 . + CDS 130827 - 132362 986 ## COG2719 Uncharacterized conserved protein + Term 132385 - 132426 7.0 - Term 132380 - 132408 1.3 123 74 Tu 1 . - CDS 132456 - 133175 664 ## COG2186 Transcriptional regulators - Prom 133261 - 133320 5.4 + Prom 133388 - 133447 8.0 124 75 Tu 1 . + CDS 133474 - 133761 214 ## - Term 133780 - 133823 7.0 125 76 Tu 1 . - CDS 134008 - 134250 151 ## - Prom 134401 - 134460 4.8 + Prom 134349 - 134408 6.5 126 77 Tu 1 . + CDS 134625 - 135038 342 ## + Term 135138 - 135167 -0.3 - Term 135122 - 135160 2.0 127 78 Tu 1 . - CDS 135192 - 135857 857 ## COG0176 Transaldolase - Prom 135904 - 135963 3.6 + Prom 135929 - 135988 2.0 128 79 Op 1 11/0.000 + CDS 136014 - 136913 749 ## COG1180 Pyruvate-formate lyase-activating enzyme 129 79 Op 2 . + CDS 136918 - 139350 1902 ## COG1882 Pyruvate-formate lyase 130 79 Op 3 . + CDS 139424 - 140185 616 ## COG1349 Transcriptional regulators of sugar metabolism 131 79 Op 4 . + CDS 140182 - 140427 231 ## COG5460 Uncharacterized conserved protein + Term 140429 - 140470 7.0 - Term 140416 - 140458 11.0 132 80 Tu 1 . - CDS 140467 - 141180 491 ## COG3700 Acid phosphatase (class B) + Prom 141414 - 141473 9.1 133 81 Tu 1 . + CDS 141497 - 141763 292 ## NT01EI_2339 hypothetical protein + Term 141913 - 141944 3.2 134 82 Tu 1 . - CDS 141962 - 142981 478 ## COG1275 Tellurite resistance protein and related permeases - Prom 143007 - 143066 3.8 + Prom 142913 - 142972 2.5 135 83 Op 1 . + CDS 143032 - 143217 63 ## 136 83 Op 2 . + CDS 143217 - 143504 377 ## Spro_1894 hypothetical protein + Prom 143544 - 143603 2.8 137 84 Tu 1 . + CDS 143670 - 143924 267 ## ETAE_2073 biofilm formation regulatory protein + Term 143946 - 143979 2.0 + Prom 143963 - 144022 6.5 138 85 Tu 1 . + CDS 144132 - 145244 900 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Term 145258 - 145292 5.6 + Prom 145304 - 145363 4.2 139 86 Tu 1 . + CDS 145510 - 146046 61 ## COG2771 DNA-binding HTH domain-containing proteins + Term 146061 - 146089 1.0 - Term 146103 - 146155 2.7 140 87 Tu 1 . - CDS 146156 - 147583 1277 ## COG0477 Permeases of the major facilitator superfamily - Prom 147827 - 147886 7.8 141 88 Tu 1 . - CDS 148453 - 149499 873 ## COG0628 Predicted permease - Prom 149601 - 149660 4.2 + Prom 149691 - 149750 4.0 142 89 Tu 1 . + CDS 149786 - 151258 1003 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 151345 - 151373 -0.3 - Term 151205 - 151254 4.1 143 90 Op 1 . - CDS 151263 - 152312 609 ## COG1054 Predicted sulfurtransferase - Prom 152458 - 152517 3.0 144 90 Op 2 . - CDS 152530 - 153090 505 ## COG1396 Predicted transcriptional regulators - Prom 153166 - 153225 5.4 + Prom 153084 - 153143 3.7 145 91 Tu 1 . + CDS 153232 - 154206 662 ## BcerKBAB4_2729 hypothetical protein + Term 154274 - 154308 0.7 146 92 Tu 1 . - CDS 154147 - 155043 514 ## COG0583 Transcriptional regulator - Prom 155146 - 155205 5.1 + Prom 155076 - 155135 2.8 147 93 Tu 1 . + CDS 155172 - 156050 911 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Prom 156067 - 156126 2.0 148 94 Tu 1 . + CDS 156325 - 156759 536 ## YE1611 hypothetical protein + Prom 157066 - 157125 4.2 149 95 Tu 1 . + CDS 157303 - 158823 1537 ## COG3104 Dipeptide/tripeptide permease + Term 158866 - 158896 3.0 + Prom 158921 - 158980 6.3 150 96 Tu 1 . + CDS 159188 - 159853 436 ## COG0586 Uncharacterized membrane-associated protein - Term 159862 - 159906 4.4 151 97 Op 1 . - CDS 159932 - 160579 448 ## COG3531 Predicted protein-disulfide isomerase - Prom 160625 - 160684 2.0 152 97 Op 2 . - CDS 160750 - 162027 1023 ## COG2814 Arabinose efflux permease - Prom 162063 - 162122 5.8 + Prom 162199 - 162258 4.8 153 98 Tu 1 . + CDS 162289 - 163137 521 ## COG3739 Uncharacterized integral membrane protein + Term 163172 - 163207 4.0 - Term 163153 - 163201 6.3 154 99 Op 1 4/0.362 - CDS 163216 - 164553 1409 ## COG2610 H+/gluconate symporter and related permeases 155 99 Op 2 . - CDS 164558 - 165094 424 ## COG3265 Gluconate kinase - Term 165406 - 165434 1.0 156 100 Tu 1 . - CDS 165458 - 166153 504 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 166311 - 166370 5.2 + Prom 166445 - 166504 5.2 157 101 Tu 1 . + CDS 166524 - 166742 339 ## gi|194433800|ref|ZP_03066074.1| osmotically inducible lipoprotein B - Term 166734 - 166775 9.5 158 102 Op 1 6/0.155 - CDS 166817 - 167143 356 ## COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins 159 102 Op 2 7/0.086 - CDS 167156 - 167881 630 ## COG0284 Orotidine-5'-phosphate decarboxylase 160 103 Op 1 8/0.017 - CDS 167982 - 169151 935 ## COG2956 Predicted N-acetylglucosaminyl transferase 161 103 Op 2 5/0.259 - CDS 169157 - 169462 198 ## COG3771 Predicted membrane protein - Prom 169488 - 169547 7.4 162 104 Tu 1 . - CDS 169716 - 170480 552 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 170637 - 170696 2.4 + Prom 170584 - 170643 2.5 163 105 Tu 1 . + CDS 170768 - 171355 376 ## COG0807 GTP cyclohydrolase II + Term 171378 - 171426 10.0 - Term 171373 - 171408 5.1 164 106 Tu 1 . - CDS 171434 - 172867 1282 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 173086 - 173145 3.2 165 107 Op 1 10/0.000 - CDS 173194 - 173982 810 ## COG0084 Mg-dependent DNase 166 107 Op 2 22/0.000 - CDS 174032 - 175018 716 ## COG0470 ATPase involved in DNA replication 167 107 Op 3 10/0.000 - CDS 175015 - 175656 669 ## COG0125 Thymidylate kinase 168 107 Op 4 6/0.155 - CDS 175646 - 176671 750 ## COG1559 Predicted periplasmic solute-binding protein 169 107 Op 5 5/0.259 - CDS 176690 - 177502 389 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 177546 - 177605 7.9 - Term 177572 - 177606 4.4 170 108 Op 1 27/0.000 - CDS 177644 - 178885 1189 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 178905 - 178964 2.2 - Term 178930 - 178963 5.4 171 108 Op 2 22/0.000 - CDS 178975 - 179211 414 ## COG0236 Acyl carrier protein - Prom 179250 - 179309 3.1 172 108 Op 3 26/0.000 - CDS 179366 - 180100 243 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 173 108 Op 4 14/0.000 - CDS 180114 - 181043 1027 ## COG0331 (acyl-carrier-protein) S-malonyltransferase - Prom 181082 - 181141 2.5 - Term 181074 - 181117 4.1 174 108 Op 5 16/0.000 - CDS 181148 - 182098 844 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 175 108 Op 6 14/0.000 - CDS 182105 - 183109 638 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 176 108 Op 7 20/0.000 - CDS 183167 - 183337 281 ## PROTEIN SUPPORTED gi|238920264|ref|YP_002933779.1| ribosomal protein L32, putative 177 108 Op 8 . - CDS 183354 - 183875 370 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein + Prom 183842 - 183901 1.6 178 109 Tu 1 . + CDS 183999 - 184616 481 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation + Term 184622 - 184650 0.6 - Term 184605 - 184644 5.5 179 110 Tu 1 . - CDS 184664 - 185620 195 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit - Prom 185745 - 185804 4.0 180 111 Tu 1 . + CDS 186240 - 189641 3086 ## COG1530 Ribonucleases G and E + Term 189663 - 189703 10.8 181 112 Tu 1 . - CDS 189945 - 190235 341 ## COG1359 Uncharacterized conserved protein - Prom 190328 - 190387 4.7 + Prom 190345 - 190404 4.5 182 113 Op 1 . + CDS 190505 - 191548 852 ## COG0418 Dihydroorotase + Term 191567 - 191592 -0.8 183 113 Op 2 4/0.362 + CDS 191617 - 192279 247 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 184 113 Op 3 . + CDS 192276 - 193034 612 ## COG0390 ABC-type uncharacterized transport system, permease component + Term 193087 - 193120 4.1 - Term 193073 - 193107 5.1 185 114 Tu 1 . - CDS 193135 - 194781 495 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase - Prom 194905 - 194964 2.3 - Term 195086 - 195113 1.5 186 115 Tu 1 . - CDS 195140 - 196246 963 ## COG0371 Glycerol dehydrogenase and related enzymes - Prom 196378 - 196437 5.5 + Prom 196495 - 196554 4.5 187 116 Tu 1 . + CDS 196628 - 196831 180 ## Dd703_3174 selenium-binding protein YdfZ + Term 196874 - 196904 4.3 - Term 196862 - 196892 4.3 188 117 Tu 1 . - CDS 196915 - 197598 663 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) - Prom 197620 - 197679 5.1 - Term 198550 - 198577 0.1 189 118 Op 1 . - CDS 198593 - 199426 641 ## COG1462 Uncharacterized protein involved in formation of curli polymers 190 118 Op 2 . - CDS 199443 - 199853 289 ## CKO_02031 curli assembly protein CsgF 191 118 Op 3 . - CDS 199863 - 200252 230 ## ROD_10971 curli production assembly/transport component 192 118 Op 4 . - CDS 200256 - 200903 80 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 201084 - 201143 4.4 + Prom 201543 - 201602 4.5 193 119 Op 1 . + CDS 201738 - 202247 225 ## G2583_1300 minor curlin subunit 194 119 Op 2 . + CDS 202300 - 202896 348 ## + Term 202911 - 202948 9.1 195 120 Tu 1 . + CDS 202957 - 203286 158 ## SC1093 putative autoagglutination protein + Term 203319 - 203354 0.6 - Term 203307 - 203342 4.4 196 121 Tu 1 . - CDS 203366 - 204847 1314 ## COG0591 Na+/proline symporter - Prom 205059 - 205118 3.9 + Prom 205195 - 205254 6.0 197 122 Tu 1 . + CDS 205443 - 209417 3580 ## COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase 198 123 Tu 1 . - CDS 210079 - 210861 287 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Prom 210940 - 210999 5.0 - Term 211001 - 211051 9.0 199 124 Op 1 . - CDS 211060 - 211575 302 ## YE2518 flagella biosynthesis protein FliZ 200 124 Op 2 3/0.414 - CDS 211614 - 212336 606 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit - Term 212482 - 212509 1.5 201 125 Tu 1 . - CDS 212533 - 213843 1213 ## COG1344 Flagellin and related hook-associated proteins - Prom 213971 - 214030 7.6 + Prom 214009 - 214068 4.6 202 126 Op 1 15/0.000 + CDS 214135 - 215544 982 ## COG1345 Flagellar capping protein 203 126 Op 2 . + CDS 215562 - 215975 426 ## COG1516 Flagellin-specific chaperone FliS 204 126 Op 3 . + CDS 215975 - 216337 277 ## NT01EI_2416 flagellar protein FliT + Term 216565 - 216606 0.5 205 127 Tu 1 . - CDS 216561 - 216833 116 ## COG3042 Putative hemolysin - Prom 216853 - 216912 5.9 + Prom 216943 - 217002 7.3 206 128 Tu 1 . + CDS 217110 - 217772 612 ## ROD_16031 putative lipoprotein + Term 217816 - 217850 3.5 207 129 Tu 1 . - CDS 217701 - 217913 93 ## - Prom 217991 - 218050 7.8 208 130 Tu 1 . - CDS 218053 - 218334 292 ## ETAE_2135 hypothetical protein - Prom 218354 - 218413 3.4 - Term 218416 - 218443 -0.8 209 131 Tu 1 . - CDS 218472 - 218684 200 ## - Prom 218743 - 218802 4.4 - Term 218721 - 218749 -0.9 210 132 Tu 1 . - CDS 218827 - 219039 114 ## - Prom 219113 - 219172 3.7 + Prom 219513 - 219572 1.6 211 133 Tu 1 . + CDS 219592 - 219960 161 ## NT01EI_3049 hypothetical protein 212 134 Op 1 . - CDS 220225 - 220539 372 ## COG1677 Flagellar hook-basal body protein 213 134 Op 2 . - CDS 220567 - 220773 59 ## + Prom 220592 - 220651 2.1 214 135 Op 1 19/0.000 + CDS 220825 - 222546 1547 ## COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein 215 135 Op 2 15/0.000 + CDS 222543 - 223535 1133 ## COG1536 Flagellar motor switch protein 216 135 Op 3 13/0.000 + CDS 223528 - 224289 709 ## COG1317 Flagellar biosynthesis/type III secretory pathway protein 217 135 Op 4 12/0.000 + CDS 224286 - 225647 1286 ## COG1157 Flagellar biosynthesis/type III secretory pathway ATPase 218 135 Op 5 8/0.017 + CDS 225842 - 226282 356 ## COG2882 Flagellar biosynthesis chaperone 219 135 Op 6 7/0.086 + CDS 226279 - 227622 951 ## COG3144 Flagellar hook-length control protein + Term 227696 - 227748 -0.2 + Prom 228280 - 228339 3.4 220 136 Op 1 13/0.000 + CDS 228463 - 228942 396 ## COG1580 Flagellar basal body-associated protein 221 136 Op 2 20/0.000 + CDS 228948 - 229961 888 ## COG1868 Flagellar motor switch protein 222 136 Op 3 6/0.155 + CDS 229954 - 230391 520 ## COG1886 Flagellar motor switch/type III secretory pathway protein 223 136 Op 4 6/0.155 + CDS 230391 - 230792 319 ## COG3190 Flagellar biogenesis protein 224 136 Op 5 16/0.000 + CDS 230792 - 231538 704 ## COG1338 Flagellar biosynthesis pathway, component FliP 225 136 Op 6 17/0.000 + CDS 231565 - 231834 344 ## COG1987 Flagellar biosynthesis pathway, component FliQ 226 136 Op 7 . + CDS 231843 - 232628 695 ## COG1684 Flagellar biosynthesis pathway, component FliR + Term 232687 - 232736 9.1 227 137 Op 1 21/0.000 - CDS 232744 - 233724 1075 ## COG1344 Flagellin and related hook-associated proteins 228 137 Op 2 . - CDS 233740 - 235425 1532 ## COG1256 Flagellar hook-associated protein - Prom 235568 - 235627 3.0 229 138 Tu 1 . + CDS 235694 - 236146 -264 ## 230 139 Op 1 6/0.155 - CDS 236320 - 237258 904 ## COG1705 Muramidase (flagellum-specific) 231 139 Op 2 9/0.000 - CDS 237258 - 238394 1027 ## COG1706 Flagellar basal-body P-ring protein 232 139 Op 3 9/0.000 - CDS 238432 - 239184 550 ## COG2063 Flagellar basal body L-ring protein 233 139 Op 4 8/0.017 - CDS 239198 - 239980 803 ## COG4786 Flagellar basal body rod protein 234 139 Op 5 8/0.017 - CDS 240020 - 240775 775 ## COG4787 Flagellar basal body rod protein 235 139 Op 6 16/0.000 - CDS 240844 - 242088 1022 ## COG1749 Flagellar hook protein FlgE - Term 242108 - 242149 2.0 236 139 Op 7 9/0.000 - CDS 242170 - 242871 641 ## COG1843 Flagellar hook capping protein 237 139 Op 8 24/0.000 - CDS 242883 - 243287 473 ## COG1558 Flagellar basal body rod protein 238 139 Op 9 . - CDS 243293 - 243742 342 ## COG1815 Flagellar basal body protein - Prom 243886 - 243945 4.4 + Prom 243850 - 243909 3.2 239 140 Tu 1 . + CDS 243944 - 244624 459 ## COG1261 Flagellar basal body P-ring biosynthesis protein + Prom 244626 - 244685 2.5 240 141 Op 1 7/0.086 + CDS 244812 - 245111 331 ## COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) 241 141 Op 2 . + CDS 245127 - 245552 440 ## COG3418 Flagellar biosynthesis/type III secretory pathway chaperone - Term 246019 - 246074 6.5 242 142 Op 1 . - CDS 246182 - 246568 247 ## NT01EI_1342 flagellar protein FlhE 243 142 Op 2 13/0.000 - CDS 246586 - 248661 2058 ## COG1298 Flagellar biosynthesis pathway, component FlhA 244 142 Op 3 . - CDS 248654 - 249805 1022 ## COG1377 Flagellar biosynthesis pathway, component FlhB - Prom 249885 - 249944 3.2 - Term 249914 - 249958 8.0 245 143 Op 1 . - CDS 249992 - 250336 329 ## COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance 246 143 Op 2 5/0.259 - CDS 250347 - 251489 973 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 247 143 Op 3 . - CDS 251500 - 252897 1137 ## COG0426 Uncharacterized flavoproteins - Prom 252965 - 253024 4.9 - Term 253027 - 253066 8.1 248 144 Op 1 9/0.000 - CDS 253115 - 254413 983 ## COG2837 Predicted iron-dependent peroxidase 249 144 Op 2 7/0.086 - CDS 254438 - 255562 1374 ## COG2822 Predicted periplasmic lipoprotein involved in iron transport 250 144 Op 3 . - CDS 255607 - 256452 892 ## COG0672 High-affinity Fe2+/Pb2+ permease - Prom 256496 - 256555 8.6 251 145 Tu 1 . + CDS 256832 - 257014 188 ## + Term 257105 - 257135 -0.3 + Prom 257118 - 257177 2.8 252 146 Tu 1 . + CDS 257225 - 258859 1195 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase + Term 258895 - 258924 0.4 + Prom 259026 - 259085 3.2 253 147 Tu 1 . + CDS 259135 - 259929 557 ## COG3228 Uncharacterized protein conserved in bacteria + Term 260150 - 260195 -0.6 254 148 Op 1 3/0.414 - CDS 259922 - 260575 237 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 255 148 Op 2 34/0.000 - CDS 260569 - 261381 474 ## COG1122 ABC-type cobalt transport system, ATPase component 256 148 Op 3 . - CDS 261366 - 261917 175 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 257 148 Op 4 . - CDS 261865 - 262041 63 ## 258 148 Op 5 . - CDS 262073 - 262654 383 ## CKO_04299 hypothetical protein 259 148 Op 6 . - CDS 262657 - 263085 270 ## COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif - Prom 263279 - 263338 80.1 + TRNA 263261 - 263336 87.1 # Asn GTT 0 0 260 149 Op 1 12/0.000 + CDS 263753 - 264397 360 ## COG0582 Integrase 261 149 Op 2 . + CDS 264452 - 264760 121 ## COG0582 Integrase + Term 264789 - 264837 9.3 - Term 265137 - 265183 5.4 262 150 Tu 1 . - CDS 265224 - 266111 388 ## COG0582 Integrase - Term 266702 - 266740 9.2 263 151 Op 1 8/0.017 - CDS 266761 - 267093 259 ## COG2337 Growth inhibitor 264 151 Op 2 . - CDS 267094 - 267351 292 ## COG2336 Growth regulator - Prom 267371 - 267430 4.2 265 152 Tu 1 . + CDS 268050 - 269195 457 ## COG4694 Uncharacterized protein conserved in bacteria 266 153 Op 1 . - CDS 269440 - 271242 164 ## Pmen_3431 hypothetical protein 267 153 Op 2 . - CDS 271285 - 272292 403 ## SPAB_01119 hypothetical protein 268 153 Op 3 8/0.017 - CDS 272292 - 276875 1842 ## COG3096 Uncharacterized protein involved in chromosome partitioning 269 153 Op 4 . - CDS 276872 - 277645 385 ## COG3095 Uncharacterized protein involved in chromosome partitioning 270 153 Op 5 . - CDS 277638 - 279038 653 ## SPAB_01115 hypothetical protein - Prom 279150 - 279209 5.2 + TRNA 279961 - 280036 87.1 # Asn GTT 0 0 + TRNA 280358 - 280433 87.1 # Asn GTT 0 0 + TRNA 280769 - 280844 87.1 # Asn GTT 0 0 + Prom 281516 - 281575 3.5 271 154 Op 1 7/0.086 + CDS 281727 - 282206 310 ## COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit 272 154 Op 2 . + CDS 282226 - 282426 220 ## COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit + Prom 282727 - 282786 6.4 273 155 Tu 1 . + CDS 282919 - 283653 755 ## ESA_00986 hypothetical protein + Term 283712 - 283751 5.3 + Prom 283676 - 283735 4.0 274 156 Tu 1 . + CDS 283787 - 286621 1415 ## ESA_00985 hypothetical protein + Term 286656 - 286691 3.1 275 157 Tu 1 . + CDS 286949 - 287782 322 ## Bcenmc03_4705 HvnC; halovibrin + Term 287810 - 287842 3.2 - Term 287834 - 287871 7.1 276 158 Tu 1 . - CDS 287896 - 288096 202 ## - Prom 288134 - 288193 8.8 + Prom 288463 - 288522 5.6 277 159 Tu 1 . + CDS 288622 - 288912 155 ## + Term 289153 - 289215 2.4 - Term 288845 - 288900 4.2 278 160 Tu 1 . - CDS 288909 - 289739 257 ## COG0583 Transcriptional regulator - Prom 289893 - 289952 5.7 + Prom 289437 - 289496 4.9 279 161 Tu 1 . + CDS 289696 - 289845 59 ## - Term 289995 - 290041 10.1 280 162 Tu 1 . - CDS 290055 - 291587 892 ## ESA_00987 hypothetical protein Predicted protein(s) >gi|316919538|gb|ADCU01000008.1| GENE 1 134 - 349 68 71 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E3230 NR:ns ## KEGG: SbBS512_E3230 # Name: not_defined # Def: putative IS1 encoded protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 35 71 1 37 37 65 97.0 8e-10 MAENRVEANAHNAGGCPASNAIHGHINDFLVRTGLRSGVSELQLPCFTAVRAEIALMSGS AFAVTHHPVSS >gi|316919538|gb|ADCU01000008.1| GENE 2 937 - 1161 260 74 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_1700 NR:ns ## KEGG: NT01EI_1700 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: Purine metabolism [PATH:eic00230]; Pyrimidine metabolism [PATH:eic00240]; Metabolic pathways [PATH:eic01100]; DNA replication [PATH:eic03030]; Mismatch repair [PATH:eic03430]; Homologous recombination [PATH:eic03440] # 1 70 1 70 75 104 78.0 1e-21 MSFNLANLPQEEMDKVNVDLAAAGVSYKERYHMPVIAELVEREQPEHLRTYFRERLAYYR TLRIDTLPYEPPTK >gi|316919538|gb|ADCU01000008.1| GENE 3 1187 - 1939 269 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 250 7 240 242 108 32 3e-22 MNSSPIALVTGASRGIGRATALLLAKRGYRICINYCQDHSAARSLVSEIETLGAESLLVC ANIADESAVCEMFDLLDQRWGRIDALVNNAGILHTQSTIEGLTAERINLILQTNVTGTFL CCREAVKRMAKRHGGSGGAIVNVSSAAARSGSPFEYLDYAASKGAMDTLTKGLSIEVAAE GIRVNGVRPGFIYTDMHADGGEPDRVDRIKSSLPMQRGGRPEEIAAAIVWLLSEEASYST GSVLDLAGGK >gi|316919538|gb|ADCU01000008.1| GENE 4 2067 - 2489 329 140 aa, chain + ## HITS:1 COG:YPO1737 KEGG:ns NR:ns ## COG: YPO1737 COG2207 # Protein_GI_number: 16121994 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 12 140 1 128 128 163 60.0 1e-40 MLLIRTITGERMTQNERNIALVCALSEWIEQHLGRDIYLDELARYSGYSLWHMQKIFRET TGMSLGRYIRERKLSGAAKRLRHTEESIIDIAVYYGFASQSHFTYMFRKHFDITPTNYRL QSEIQLSTIQPLHVMYKQSA >gi|316919538|gb|ADCU01000008.1| GENE 5 2508 - 3617 699 369 aa, chain + ## HITS:1 COG:ybiR KEGG:ns NR:ns ## COG: ybiR COG0471 # Protein_GI_number: 16128786 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli K12 # 9 369 6 366 372 322 55.0 1e-87 MLNLLRSTFRNILRDRLLIFLLAAGVILAFYTPAPLREYPLWIDWPTITTLLGLLLLTKS VEVSGYFDWLGRKIIARLNSERTLALFMVGASALLSTFLTNDVALFIVVPLTITLKKLSA LPVTRLIIFEALAVNVGSLLTPIGNPQNILLWNHSGLSFGSFIWQMLPLAGVLICVLLLV TLLCFPAKTIRPLVSHADNHCQRRLLIACVLLYVLFLISVDVGVPYWGLLAVFATLLWLA PTVILMVDWALILIFIAMFIDVKLFTQLPVLLPLTESMQHLSTAGVYASGILLSQLISNV PATIMLLGFIPASITLAYAVNIGGFGFALGSMANLIALRMANEKRIWLKFHLFSIPALAI SAALGWLLL >gi|316919538|gb|ADCU01000008.1| GENE 6 3671 - 4909 1190 412 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_2083 NR:ns ## KEGG: YPDSF_2083 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 410 1 414 415 659 75.0 0 MTHLHIDNIPEAIKATKQQLRAALPDYREVFTALEKHIREQVNAVKQSAEPVPRLHAQDI IDGKVTQEQRDKIRQAGCCAIHGVFAQDQAEEWNQEIGDYLERNHFTERLKHAAEDNYFG DLKDSKPQIYGIYWSRPQVEARQSERMRQVQVFLNRLWESESAGQQHFDAERVVTYADRT RRRPPRSSSLGLSPHVDGGSIERWLDVKFREVYRHVFSGEWQNYNPFAAQGRTEVREFPS PAVCSMFRTFQGWTALTPQRAGAGTLKLIPIANAMAYVLLRALQDDVAEDDLCGAAPGRA LSISAQWHSLLLEAVVPIPDLEAGDTVFWHCDVIHAVENEHNGEFDSNVMYIAAVPWCEK NAAYLQKQLPAFIAGKTPPDFAPDDFEVDFVGRATQDMLSEQGQRQLGFTTK >gi|316919538|gb|ADCU01000008.1| GENE 7 5422 - 6192 959 256 aa, chain + ## HITS:1 COG:SMc03891 KEGG:ns NR:ns ## COG: SMc03891 COG0834 # Protein_GI_number: 15967027 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Sinorhizobium meliloti # 20 256 21 257 257 310 67.0 2e-84 MKKMTLALLATSLFATSALAQAADDLAAIKSAGVMKFGTEGTYAPYTYHDKSGKLVGFDV DVARAVAEKMGVKPEFVEGRWDGLIAGLSAKRYDAVINQVGITDERKAKFDFSQPYIGSK AVLVVRDDNTTIKSFADLKGQKAAQSLTSNYSKLATKNGADLVPTDGFNQSLDLVLSGRA AATLNDNLSFLDFKKHKPDAKVKIVATDENTENSAILLRKDQPELVKAVNKALDEIKADG TYKTISVRYFGQDVSQ >gi|316919538|gb|ADCU01000008.1| GENE 8 6324 - 7019 645 231 aa, chain + ## HITS:1 COG:mll3859 KEGG:ns NR:ns ## COG: mll3859 COG0765 # Protein_GI_number: 13473305 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Mesorhizobium loti # 16 230 4 218 226 261 70.0 5e-70 MAWLHGLTDYIHGLAWLQLMIDSFWSLLSAGLQFTLPLAILSFIGGIIVGFITALARLYA PKPVKWIFDFYVWVIRGTPLLVQLFLIFYGLPSAGITLDAFPAALIGFTLSVGAYTSEII RGAIISVPKGQWEASYSIGMSSSQAMRRVILPQSVFVSLPPLSNSFISLIKDTSLAAVIT VPEMFLAAQRIVSVTYEPLILYVEAALIYLMFSTVLGKLQNRLEIYYRRYE >gi|316919538|gb|ADCU01000008.1| GENE 9 7243 - 8265 555 340 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|188026219|ref|ZP_02961315.2| ## NR: gi|188026219|ref|ZP_02961315.2| hypothetical protein PROSTU_03336 [Providencia stuartii ATCC 25827] # 42 337 46 320 321 64 23.0 1e-08 MKFRFTVIVSLLYCSLFLTISDAKTINAVYSDERSLAPIRDCRIQLRTLLASSNQHWIAA EHPKPADLDVLMEEHDDRKGMLFIQIINTREAKTDPSPGAGHYGWVLYNKKTGELWDESD EDNPQKLIADPAAVKNYQACSTQDDQCFQANQNMTDDPTGGFYPNPFEVKGDSSLRYIVT SAKRQHFSWAPNKNCEVGAFVVNDDKVLALSWGQQFGYIWSRYTNPATKVITEGWLPQEA LKTKEQVCSSIQQQLLNVNTDQNFLESRIVFNHHQRLYFYDAPNDICLRSDGVFIVDNDK VQASDKSSTAGFTYVRFVHPVTKDVTSGWVQSSGLARPQQ >gi|316919538|gb|ADCU01000008.1| GENE 10 8345 - 9289 460 314 aa, chain - ## HITS:1 COG:STM1236 KEGG:ns NR:ns ## COG: STM1236 COG4461 # Protein_GI_number: 16764591 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria, putative lipoprotein # Organism: Salmonella typhimurium LT2 # 8 97 4 98 109 60 38.0 5e-09 MLNLNSVLFIVVAVGLPASALAMDCSKATLKDDVAICGDTTLMQLDAVLNKNYLSARQHS DKDILKTQQLSWLKQRQQCGDDTGCLGNSYVERIKTLAEKDNVSVIHNASKQWDFVLSVS DCNKDDSYPTCEGPGTLDIFTKGTGQWVQRIPMDNLFIELDAKGKATANLVEMYGENNSG LVSEDINFDGSDDIALRAGNEGAYGGPSYDVFLYQPKSKTFKRHEALTELGSTNLGLFDV DPKLQTLTTSTKSGCCWHQFSVWKIKNNQPLLIKEITEAASPGEKPEFMTITTTIRTLVN GQWKTSESKDQVPE >gi|316919538|gb|ADCU01000008.1| GENE 11 9859 - 10704 298 281 aa, chain - ## HITS:1 COG:STM3678 KEGG:ns NR:ns ## COG: STM3678 COG2207 # Protein_GI_number: 16766963 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 280 1 271 271 340 58.0 1e-93 MLEIALDLPIRVQNGGLFISRGIGVHPSRKLSSWELIFVEKGTLTIREEDTSFSVSEGEI LLLQPQRSHRGLETFPLDLKFYWLHFDINAFDIDEIARKYGRNSSTATLLSIPQHCKVHD PQYITSLFRQFLNEQENRKQPAALSLIFLLMLQQISDALPDDANITNSGVALAYKARQLI KTQYHLPISTSSLAGQLFCNADYLGRVFRKTFGVTLTEALHRQRVSSAEKMLLNDMCSIA EVAQRSGFHDVGYFRQIFRKQIGLTPVAYKRRYCKEHINSD >gi|316919538|gb|ADCU01000008.1| GENE 12 10983 - 12380 1163 465 aa, chain + ## HITS:1 COG:ECs4458 KEGG:ns NR:ns ## COG: ECs4458 COG2211 # Protein_GI_number: 15833712 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli O157:H7 # 1 463 1 463 466 694 79.0 0 MTATPINQTDVVAENNNQQLSIREKIGYGLGDAGGTVITCLIMNFLTFFYTDTFGLTPAL VGTLFIALRIIDAVSDPLMGILADRTNSRWGRFRPWQLWIALPIGIVGVLTFTVPDVSMN MKILWAFVTYFLLSISYTAINVPYCALINTMTTRHSEVISCQSWRFVLCGVAGFLVSVGL PWLIDILGKGNQALGYQLGVGALCAVAVVMFLCCFFWVRERVPLALMGKFTLREHMSGLR NNDQMLLVLVMSFLLINVFNLRGGGYMYFITYVLQGSTGFASLFFTMVTVASILGAIIVS PLSRKFDTVRLYYVTNLILALLAVIMWFIPTGPQFQILWLAVILGNGIILGFTLPLHFSI MAFADDYGEWKNGVRSSGMNFAFNLFFIKLAWASSAGVLSLVFIWVAYQPGMANQTPASL NGITALETLLPAFFHLALAFAIRFCRLNDPMMNRISSDLQTRHAG >gi|316919538|gb|ADCU01000008.1| GENE 13 12414 - 14399 1492 661 aa, chain + ## HITS:1 COG:ECs4459 KEGG:ns NR:ns ## COG: ECs4459 COG3533 # Protein_GI_number: 15833713 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 18 661 5 650 656 1098 78.0 0 MSTLETVQPNTTSIPSQELDLNHVHVSDPFLGQYQRLVRDVVIPYQWDALNDRVSDAEPS HAIENFRIAAGLENGEFYGMVFQDSDVAKWLEAVAWSLCQKPDRELERTADHVIELVEAA QCEDGYLNTYFTVKAPQDRWTNLAECHELYCAGHMIEAGVAWFQATGKRRLLNVVCRLAD HIDGVFGPHENQLHGYPGHPEIELALMRLYEVTGNSRYMKLTQYFVEQRGSHPPHYYDEE YEKRGKTSYWNTYGPAWMVKDKAYSQAHEPLALQQSAIGHAVRFVYLLAGVAHLARLNND EEKRQTCLRLWNNMVQRQLYITGGIGSQSSGEAFSSDYDLPNDTVYAESCASIGLMMFAN RMLQMEGDSQYADVMERALYNTVLGGMALDGRHFFYVNPLEVHPKSIPFNHIYDHVKPIR QRWFGCACCPPNIARILTSIGHYIYTQRSDALYINLYVGNETLLDNGLKIAISGNYPWDE NVSVHIRTEKPLHQTLALRMPEWCEKPRVQLNGETCEDLLQRGYLHIAREWQDGDRLEIV LPMPVRRVYGNPLLRHVAGKVAIQRGPLVYCLEQADNGTELHNLTLPPDSTFTLLEGKGI FAHKTLIQATGTRVISEEPQNQPLYRYDAAPEQQQEQKLTFIPWFSWANRGEGEMRIWVR E >gi|316919538|gb|ADCU01000008.1| GENE 14 15071 - 15316 319 81 aa, chain - ## HITS:1 COG:no KEGG:Spro_2831 NR:ns ## KEGG: Spro_2831 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 76 1 78 79 92 73.0 5e-18 MSQMLTESEELASDLVACQLVIKQILDVIDVIAPTEVREKMAKQLKSINFDKASIDPVTK RGVQKAIALIELKFAQQEQAH >gi|316919538|gb|ADCU01000008.1| GENE 15 15378 - 15998 731 206 aa, chain - ## HITS:1 COG:YPO2212 KEGG:ns NR:ns ## COG: YPO2212 COG0009 # Protein_GI_number: 16122440 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Yersinia pestis # 1 205 1 205 206 359 84.0 2e-99 MSQLFYIHPDNPQSRLISQCVEVLRKGGVIVYPTDSGYALGCMLGEKNAMERICRIRNLD SNHNFTLVCRDLSEISTYAFVDNTAFRLIKNNTPGHYTFILKATKEVPRRLMSEKRKTIG LRVPSNPIALDLLAALGEPLMSTTLMLPGNDFAESDPEEIQDALGKVVDLVIHGGFLGQQ PTTVIDLTEDSPEVVRVGAGDPKPFM >gi|316919538|gb|ADCU01000008.1| GENE 16 16055 - 16939 581 294 aa, chain - ## HITS:1 COG:STM1721 KEGG:ns NR:ns ## COG: STM1721 COG0613 # Protein_GI_number: 16765065 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Salmonella typhimurium LT2 # 20 294 12 286 293 382 70.0 1e-106 MAILQDTQIESDEVTLSPTMLYDLHSHTTASDGLLSPAELVARAVEMGVTTLAITDHDTT VGLPAARQAIIDLELELELIAGVEISTLWENHEIHIVGLNVDITDPALQTLLAAQVERRQ ARAKEIALRLDKARIPGALEGATRIAGGAEITRGHFARYLVEQGYATNMGGVFKHYLARG KTGYAPPQWCTIEEAICAIHHAGGLAVVAHPGRYQLSNKWLKRLLANFKQWGGDAMEVAQ CQQAPNERSQLAAYALQFELLASQGSDFHQPCSWIELGRRLWLPTGVAPVWQNW >gi|316919538|gb|ADCU01000008.1| GENE 17 17392 - 18954 1403 520 aa, chain + ## HITS:1 COG:YPO2208 KEGG:ns NR:ns ## COG: YPO2208 COG0147 # Protein_GI_number: 16122436 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Yersinia pestis # 1 520 2 521 521 835 81.0 0 MNSTKPALTLLTQTAAYRNDPTALFHQLCGARPATLLLESAEIDNKQDLKSLLVIDSALR ITALGRSVTIQALTENGRSLLPLLDAALPSDVENDIHPNQRVLHFPAIDTLQDEDARLKS RSVFDALRTLLTLVTVPAQEREAMFIGGLFAYDLVAGFENLSALNSDQRCPDFCFYLAET LLVLDHQHHSARLQASIFTHNTAETQRLQARLHQLTQQMTQEAAPITHPNVEDMQLSCNL SDEAFGAVVSQMQQAIRIGEIFQVVPSRRFSLPCPSPLAAYHTLKHSNPSPYMFFMQDND FSLFGASPESALKYDATNRQIEIYPIAGTRPRGRRANGELDRDLDSRIELEMRTDHKELA EHLMLVDLARNDLARICEPGSRYVADLTKVDRYSFVMHLVSRVVGTLRQDLDVLHAYQAC MNMGTLSGAPKIRAMQLIAEFEQTRRGSYGGAVGYFTAHGDLDTCIVIRSAYVEDGIATV QAGAGVVLDSVPQAEADETRNKARAVLRAIATAHHVKEVF >gi|316919538|gb|ADCU01000008.1| GENE 18 18954 - 19532 571 192 aa, chain + ## HITS:1 COG:trpD_1 KEGG:ns NR:ns ## COG: trpD_1 COG0512 # Protein_GI_number: 16129224 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Escherichia coli K12 # 1 190 1 190 196 333 84.0 1e-91 MADILLLDNIDSFTYNLVDQLRSSGHRVVIYRNQIPAEVIINKLTEMENPVLMLSPGPGT PSEAGCMPELLNKLRGKLPIIGICLGHQAIVEAYGGHVGQAGEILHGKASLVEHDGEGMF SGLPSPLPVARYHSLVGSQIPAGLTVNASFNGMVMAVRHDDERVCGFQFHPESILTTQGA RLLEQTLEWALV >gi|316919538|gb|ADCU01000008.1| GENE 19 19615 - 20649 961 344 aa, chain + ## HITS:1 COG:YPO2206 KEGG:ns NR:ns ## COG: YPO2206 COG0547 # Protein_GI_number: 16122434 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Yersinia pestis # 14 344 3 333 333 469 85.0 1e-132 MQAALIKPSIFEQQSILDKLFTSQTMSQEESHQLFGAIVRGELQDSQLAAALISMKMRGE RPEEIAGAASALLADAQPFPRPDYDFADIVGTGGDGTNSINISTASAFVAASCGAKVAKH GNRSVSSRSGSSDLLQAFGIRLDMSAEDSRQALDDLNVCFLFAPQYHTGFRHAMPVRQQL KTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYQNAAVVHGGGMDEVAIH APTLVAELHQGEIESYQLSPQDFGLESYSLNALQGGTPEENRDILARLLQGKGDAAHAAA VAANVALLLKLFGQDNLRHNAQLALETIRSGTAFERVTALAARG >gi|316919538|gb|ADCU01000008.1| GENE 20 20652 - 22052 1133 466 aa, chain + ## HITS:1 COG:YPO2205_1 KEGG:ns NR:ns ## COG: YPO2205_1 COG0134 # Protein_GI_number: 16122433 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Yersinia pestis # 7 267 16 276 276 389 75.0 1e-108 MLQGNLSPQRSSQEQETVLNRIVRDKAVWVEARQSQQPLESFQASIVPSSRSFYDALSGN RTAFILECKKASPSKGVIRENFNPVEIATLYRDFASAISVLTDEKYFQGDFDYLRQVSAT VHQPVLCKDFVISAYQIYLARFYQADAILLMLSVLDDEQYLHLAAIAHSLQMGVLTEASN EEELERAIALKAKVVGINNRDLRDLSIDLNRTRQMAPRLPQGVTVISESGIHTYSQIREL SHFANGFLIGSALMSEPDLSLALRRVLLGDNKVCGLTRTEDAASAYSAGAVYGGLIFVGS SPRYVDISQAREVIAAAPLKYVGVFRNAKLETVRLTVERLGLYAVQLHGDESQEYIRELR QLLPINCQIWKAMRINDAIPARNLLHVDRYVFDNGNGGTGQAFDWNLLQGKTLDNVMLAG GLNASNCVMAAKLGSAGLDFNSGVESAPGQKDRQKLEAVFQTLRAY >gi|316919538|gb|ADCU01000008.1| GENE 21 22150 - 23340 1274 396 aa, chain + ## HITS:1 COG:YPO2204 KEGG:ns NR:ns ## COG: YPO2204 COG0133 # Protein_GI_number: 16122432 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Yersinia pestis # 1 396 1 396 396 727 90.0 0 MTLLNPYFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQFIDLLKNYAGRPTALTL CRNLTKGTKAKLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVATAL ACALLGLKCRVYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSY DKAHYLLGTAAGPHPYPTIVREFQRMIGEETKEQILGFEGRLPDAVLACVGGGSNAIGMF ADFIVEESVRLIGVEPGGLGIETGQHGAPLKHGKVGIYFGMKSPMMQTEEGQIEESYSVS AGLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKRLSREEGIIPALESSHALAHALKM IEQDPDKEQLLVVNLSGRGDKDIFTVNDILKARGEI >gi|316919538|gb|ADCU01000008.1| GENE 22 23340 - 24146 383 268 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 262 1 256 263 152 36 2e-35 MERYQQLFAELKERKEGAFVPFVTLGDPTPALSLEIINTLIDAGADALELGIPFSDPLAD GPTIQDATLRAFAAGVTPTVCFEMLAEIRKKHPHIPIGLLMYANLVFHNGIDEFYQRCAE VGVDSVLVADVPLEESTPFRQAALRHGIAPIFICPPNADDALLQGISEQGRGYTYLLSRA GVTGAETRAQLPLHHLVARLGELSAPPALQGFGISEPSQVKEALDAGAAGAISGSAIVKI IETNHHHPDVMLKKLHDFVSGMKAATRR >gi|316919538|gb|ADCU01000008.1| GENE 23 24334 - 24648 365 104 aa, chain + ## HITS:1 COG:YPO2202 KEGG:ns NR:ns ## COG: YPO2202 COG2823 # Protein_GI_number: 16122430 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Yersinia pestis # 1 104 1 104 104 120 67.0 4e-28 MKWVKAITTFCAAAIFSVALAGCAPTAKQEGTGGYIDDTVITTKVKSALLAEKSLKSTEI SVETFKGRVQLSGFVTSSADANRAVAVAKTVKGVRTVENDMRIK >gi|316919538|gb|ADCU01000008.1| GENE 24 24780 - 25430 695 216 aa, chain - ## HITS:1 COG:YPO2201 KEGG:ns NR:ns ## COG: YPO2201 COG3047 # Protein_GI_number: 16122429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein W # Organism: Yersinia pestis # 5 216 1 211 211 277 61.0 1e-74 MEGMMKKLTLALCVAATLAPSFAMAHQAGDFIVRAGTATVRPTESSENVMGLGGFKIDND TQLGLTFSYLITDNIGVELLGATPFQHKVGLQATGDIASSRQLPPTLMAQWYFGKAEDKL RPYVGVGINYTNFYDAKFNNTGKSLGLHDLSVDNSWGAAGQVGLDYMVDKDWMINASLWY MDIDTTIKFRDSNNQKQNIDTHVDPFVFMFAVGYRF >gi|316919538|gb|ADCU01000008.1| GENE 25 25706 - 26122 175 138 aa, chain + ## HITS:1 COG:STM1733 KEGG:ns NR:ns ## COG: STM1733 COG0727 # Protein_GI_number: 16765077 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Salmonella typhimurium LT2 # 14 132 5 123 134 148 64.0 2e-36 MSNTSTISTLIQPNPCISCGACCGYFRVSFYWAEADDAGGCVPASLTEQVNPYLRCMQGT NSKKPRCVNLRGEIGQQVMCAMYENRPSPCREFEQSWEYGERNEACDRARAAYGLPPLAP NNVEEIASSIATGCHLPG >gi|316919538|gb|ADCU01000008.1| GENE 26 26241 - 26993 844 250 aa, chain + ## HITS:1 COG:no KEGG:Spro_2675 NR:ns ## KEGG: Spro_2675 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 247 1 249 250 241 65.0 1e-62 MPITARTLYRDTFNFFRHQLSTLCLLALLTAFISVILNQAFTPGADDLSILAGADGTLSS GMGLQEMVQQMTPEQQMVLLKVSAAASFSALIGNVLLLGGMLALIPLVSQGQRISALRAI GASAPMLPRLLILMFLCTLMVQLGITAFIVPGIVLAVGLALAPMIMSGEKAGIFTSIRSS FRLSFANVRLISPAIMLWLAAKLALLLLVGVLSALHPTIGMVIIGALSNLISALLIIYLS RLYMLVKQSA >gi|316919538|gb|ADCU01000008.1| GENE 27 27109 - 27897 941 262 aa, chain - ## HITS:1 COG:kdgR KEGG:ns NR:ns ## COG: kdgR COG1414 # Protein_GI_number: 16129781 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 2 262 3 263 263 426 84.0 1e-119 MSTDIDKQPDSVSSVLKVFGILQALTEEREIGITELSQRVMMSKSTVYRFLQTMKSLGYV SQESESEKYSLTLKLFELGAHALQNVNLIRSADIEMRELSRLTRETIHLGALDEDGIVYI HKIDSMYNLRMYSRIGRRNPLHSTAIGKVLLAWRDREEAKEIISQIEFKRSTDKTILTPE ELLVALDMVKQQGFGEDNEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTIRFSEDAKHEY VTMLHTAARNISEQMGYHDYPF >gi|316919538|gb|ADCU01000008.1| GENE 28 28120 - 29496 1196 458 aa, chain + ## HITS:1 COG:YPO1712 KEGG:ns NR:ns ## COG: YPO1712 COG0477 # Protein_GI_number: 16121972 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 452 1 452 455 584 73.0 1e-166 MKSTPNDGVPLPQRYGAILAIALGITVAVLDGAIANVALPTIARDLNASAATSVWIVNAY QLAITISLLSLASLGDIIGYRKVYLTGLLVFSVTSLGCAMSDSLWTLTLARVLQGFGAAA VMSVNVALVRLIYPQRHLGRGMGINALIVAVSAAAGPSVAAAILSVSSWPWLFAVNVPIG IAAFICGMKFLPQNPPKVGKPKFDVYSALLNALTFGLLISAISGFAQRQNSLLLLGEVVI MLVVGTLFVRRQLTQEFPLLPVDLLRIPIFSLSVGTSICSFSAQMLAFVSLPFFLQTVLG KTEVMTGLLLTPWPIATMIMAPIAGRLLERFNAGLLGSIGLALFAVGLLSLALLPASPSD LDIIWRMALCGAGFGIFQSPNNHTMISSAPRHRSGGASGMLGTARLLGQTSGAALVALMF NLFGNHGTHSSLLLGALFALCAAIVSSLRIRQPKPSAQ >gi|316919538|gb|ADCU01000008.1| GENE 29 29596 - 29925 236 109 aa, chain - ## HITS:1 COG:no KEGG:YE1874 NR:ns ## KEGG: YE1874 # Name: not_defined # Def: putative DNA-binding protein # Organism: Y.enterocolitica # Pathway: not_defined # 4 108 25 129 133 77 42.0 1e-13 MNEFTRVFNELGMTKTELTTLLNAPRNTIFNYLNGSVTNMPASAVTLITLLAFIKQHHPR AFEEWGEIARYNKNQEKRDGNTLSLFDIISDEVLLQGIVRHGELRGFIK >gi|316919538|gb|ADCU01000008.1| GENE 30 30234 - 30779 214 181 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRKITFIAVVIASSFVGMAQAHLNLTDALGGSSDEAVAFRKWVLATHKIDSSVFDYSNN AQNTFVNSPTTNIGNSNQTAHNLLDNHNYDLQTYWIPQFESAWSELPKPTNTTTTPSGNY NRGGTPTYSIPDNTPKPVYYGPTQRPNTSVEIENAKPETPHLDGQHNVEINPAMVILKAL T >gi|316919538|gb|ADCU01000008.1| GENE 31 30785 - 31309 414 174 aa, chain + ## HITS:1 COG:ECs0548 KEGG:ns NR:ns ## COG: ECs0548 COG5295 # Protein_GI_number: 15829802 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 3 170 168 334 338 64 30.0 7e-11 MLAQQKLTSEKYASQNISDKRVSSSNETTLNKKQSLASRKVAEIAQYNAMQLKIDNMALA DNHHRIASNSAAISSNSQRLDSVQHHQAEQDSRINENKKQASAGISAAFAQANIPQVTDS QQFAVGAGVGGYDSENAIAVGASFHATQNTIVKMTVSDDTQNNFGYGAGVSVGW >gi|316919538|gb|ADCU01000008.1| GENE 32 31376 - 31792 432 138 aa, chain + ## HITS:1 COG:no KEGG:YE1871 NR:ns ## KEGG: YE1871 # Name: not_defined # Def: putative lipoprotein # Organism: Y.enterocolitica # Pathway: not_defined # 7 138 6 140 142 142 61.0 3e-33 MKVQKLLLVSVVAGLLAGCTSSAERMAKCESQGVSKDACYIAEQNRINTLNAAAEKQALE NAQQQYGQATHKAVVKTGYGVTVKRGTDGIVTVNGKPAALDEKNADAAVYSQGIYQVIFY TKGKIALMENRQFKGYLK >gi|316919538|gb|ADCU01000008.1| GENE 33 31846 - 32496 653 216 aa, chain - ## HITS:1 COG:YPO2391 KEGG:ns NR:ns ## COG: YPO2391 COG0307 # Protein_GI_number: 16122614 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Yersinia pestis # 1 209 1 209 218 340 80.0 1e-93 MFTGIVQGTAPVVSIDEKSNFRTHVVKFPQELLPGLELGASVAHNGCCLTVTKVEDDLVS FDLMKETLRITNLGDVTIGSVVNLERAAKFNDEIGGHLMSGHIICTAEIVKILTSENNRQ IWFKMPSTDLMKYVLHKGFIGIDGISLTIGEVTKSRFCVHMIPETLQRTTLGVKRLGDKV NIEIDPQTQAVVDTVERVLASREATLAALSKAEPAA >gi|316919538|gb|ADCU01000008.1| GENE 34 32867 - 34237 1197 456 aa, chain + ## HITS:1 COG:YPO2392 KEGG:ns NR:ns ## COG: YPO2392 COG0534 # Protein_GI_number: 16122615 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Yersinia pestis # 1 455 1 456 457 672 78.0 0 MQKYWIEARSLLALAIPVIIAQVSQTAMGFVDTIMAGGVSATDMAAVAVGTSIWLPAILF GHGLLLALTPVIAQLNGAGRRDKIGHQVQQGFWLALVVSALIIVVLYNAKHIIDMMHNID PNLANKAIGYLHAIMWGAPGYLFFQVLRNQCEGLSKTKPGMVIGFIGLLVNIPINYIFIY GKLGAPALGGVGCGVATGTVYWVMYFIMRWYVRHASSLRDLRPKRMEAPQWATIHRLINI GMPVALALFFEVTLFAVVALLVSPLGIVSVAGHQIALNFSSLMFVLPMSLGVAATIRVGY RLGEGSAENAKVAARTSIAVGMTMAACTAIFTVIFREPIALLYNDNPEVITMASHLMLLA AIYQISDSVQVIGSGVLRGYKDTRSIFFITFTAYWILGLPTGYVLALTDYVVPAMGPSGF WTGFIIGLTSAAIMMALRIRWLQNQPAAWILQRAAR >gi|316919538|gb|ADCU01000008.1| GENE 35 34855 - 36465 876 536 aa, chain - ## HITS:1 COG:no KEGG:Nmul_A0920 NR:ns ## KEGG: Nmul_A0920 # Name: not_defined # Def: tyrosinase # Organism: N.multiformis # Pathway: not_defined # 43 512 40 533 566 332 39.0 2e-89 MSKRESPFSLSRRRLIIATTLTTLAAALPFQSAFSAMPSTDTKRRYTRVNLNSKEGQRML ESYQKGIRAMLALPPSDPLNWYRHTLIHTLDCPHGNWWFLPWHRGYVGWFEKIIRKLSGD ADFAMPFWDWTAEPRIPEVFFDGVLNPDNQAFIDSYAKFREALFNPVEALWGQFTPQQLH ELQLRNYPYPRDLWRGIEGDGKPEDAMFFPRGQTRALTQDQPNFDCTTQNAVSLETILDA LAPRSFELFGSESAPNHSNSHQHGFGILEAFPHNKVHNDIGGFMGNFLSPVDPVFFMHHA NLDRLWEVWRTKQIRDNLPTEPQTGLSLWKNEPFLFYVDENGQPVQKNSAGDYAQIGDFD YDYQTGSGDSTPRFTQGKASSLPALQLDATLDQTDLSNGQIVNAQVILPKPLQNSAELFG DEQQRYYALVEIMPMSSVQGVSLNVALDKPSLMQKRTQVSAVDTCQDPVNSFAFFGSMDM TNMKTTFMVPMTAALRGLSGSEKSSGMINIYISATTEDDMKMKVNAKVLSVILKTF >gi|316919538|gb|ADCU01000008.1| GENE 36 37067 - 38479 1624 470 aa, chain + ## HITS:1 COG:YPO2393 KEGG:ns NR:ns ## COG: YPO2393 COG0469 # Protein_GI_number: 16122616 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Yersinia pestis # 1 470 1 470 470 794 90.0 0 MKKTKIVCTIGPKTESEEMLNNMLTAGMNVMRLNFSHGDYEEHGQRIKNIRAVMEKTGKK AAILLDTKGPEIRTMKLEGGKDAALTAGQTFTFTTDQSVVGNTSRVAVTYPGFAADLKIG NTVLVDDGLIGMEVIEVSETEVVCKVLNAGDLGENKGVNLPGVSIQLPALAEKDKRDLVF GCEQGVDFVAASFIRKRSDVMEIREHLKAHGGENIQIISKIENQEGLNNFDEILEASDGI MVARGDLGVEIPVEEVIFAQKMMIEKCNRARKVVITATQMLDSMIKNPRPTRAEAGDVAN AILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMQSRIETLHDSRKLRITEAVCR GAVETAEKLDAPLIVVATAGGKSAKAVRKYFPDAMILALTTNPVTARQLILSKGVVPMLV KEIASTDDFYRIGKEVAVESGLAQKGDVVVMVSGALVPSGTTNTASVHVL >gi|316919538|gb|ADCU01000008.1| GENE 37 38783 - 39019 282 78 aa, chain + ## HITS:1 COG:STM1377 KEGG:ns NR:ns ## COG: STM1377 COG4238 # Protein_GI_number: 16764727 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein lipoprotein # Organism: Salmonella typhimurium LT2 # 1 78 1 78 78 94 82.0 3e-20 MNRTKLVLGAVILASTMLAGCTSNAKIDQLSTDVQTLTTKVDQLSNDVNAMRTDVQSAKD EAARANQRLDNIRGGYKK >gi|316919538|gb|ADCU01000008.1| GENE 38 39461 - 39697 247 78 aa, chain + ## HITS:1 COG:STM1377 KEGG:ns NR:ns ## COG: STM1377 COG4238 # Protein_GI_number: 16764727 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein lipoprotein # Organism: Salmonella typhimurium LT2 # 1 78 1 78 78 96 88.0 8e-21 MNRTKLVLGAVILASTMLAGCSSNAKIDQLSTDVQTLNTKVDQLSNDVNAMRADVQTAKD DAARANQRLDNMAVKYKK >gi|316919538|gb|ADCU01000008.1| GENE 39 39922 - 40923 1031 333 aa, chain - ## HITS:1 COG:STM1215 KEGG:ns NR:ns ## COG: STM1215 COG1376 # Protein_GI_number: 16764570 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 22 313 26 319 321 351 62.0 1e-96 MKRALPLVTMLLSVWMAGTSVAEATEYPLPPPDSRLIGENVTVTVQNNGKPLEDIASRYQ IGLLGMLEANPGVDPYLPTPGTVLTIPSQMLLPDAPREGIVINLAEMRLFYYPKGEGKVV VYPIGIGQLGRNTPEMVTSVSQSIANPTWTPTANIRKHYKAEGVTLPAVVPAGPENPMGL FALRLSAQGGVYLIHGTNANFGIGMRVSSGCIRLRPDDIEALFKTVPKGTRVQIVNAPVK VSVEPDGKRYVEVHQPLSRTEKDDPQTMPIVLKPAAKKFAESPLTDRLVFDEAMKRRSGM PVLVHHGQEVKSEPAANAVKITEAKAETAKDIQ >gi|316919538|gb|ADCU01000008.1| GENE 40 41299 - 42732 967 477 aa, chain + ## HITS:1 COG:PA2865 KEGG:ns NR:ns ## COG: PA2865 COG4623 # Protein_GI_number: 15598061 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein # Organism: Pseudomonas aeruginosa # 37 456 39 456 476 240 31.0 5e-63 MVRCLYLFIALLFSAFSYAEPAKTLALPTAIKSVYGDFDTMQQRRIIRVLIPYSKTFYFL DNQGTPRGLMVELMQEFDKQLNNGVKPDKKIHVVLIPTSRDKLIPNLLAGKGDVIAANLT ITPERQQLVDFSTPLATGVHEVVVANKLQPPLTTVNDLAGKSVFINPSTSYMQSVNAFNE QLKKQGLAPLRVNSAPGNFEPEDILEMINANLAGYTVVDRYLALLWQKIYPNLVVYDHIA LREDGNIALAWRKNSPLLRAKLDPFCASHKLGSSFGNQQIYKYLRSVKWVKSATSEKELT KFAQVTAIFQKYGKQYSVDWLLMVAQGYQESQLDQTKRSHSGAIGIMQILPSTGKSLKVG DITQADPNINAGVKYIRFMQERYFADQPMDDLNKMLFTFAAYNAGPAKVESLRKQAKTMG LDPNRWFDNVERVAQLKIGNETVQYVSNIFKYYVAYTLIKQEQLEKEQAAKPAPPLI >gi|316919538|gb|ADCU01000008.1| GENE 41 42729 - 44345 1474 538 aa, chain - ## HITS:1 COG:YPO2339 KEGG:ns NR:ns ## COG: YPO2339 COG4166 # Protein_GI_number: 16122563 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Yersinia pestis # 1 538 1 538 538 802 73.0 0 MHLFRVTALAALIASGFVTAQAAQVPAGTLLADKQEIVRHIKDEPASLDPAKVVGLPEAQ VARDLFEGLVNQGADGKPEPGVAQSWQTVDNKRYVFKLRENAKWSNGEPVTAYDFVYSWQ RLVDPKTLSPFAWFAQMAGIANADGIISGKVPVQKLGVAAPDSQTLVVQLNKPVPFFVNL LANFSLFPVPQKTIEKYGNDWTKPENVVGNGAFAMQERVVNEKIVLKPNPYYWDHKNTVL TKVTFIPINQESAATKRYLADDIDITESFPKNMYKKLMKDIPGQVYTPDQLGTYYYAFNT QKAPLNDVRVRRALSYAIDRQIIAEKVLGTGEKPAYHFTPDVTAGFEPVPLAMQKMTQAE RNKQAKEWLKEAGYGPKKPLKLTLLYNTSENHQKIAIAVASMWKKSLGAQVKLTNQEWKT YIDSRNTGKFDVVRASWVGDYNEASTFLSLLTSTHSGNIAKFNSPGYDKLLKMASEETDA AKRNADYVQAEQIIAEQAPIAPIYQYTNGRLIKPWVKGYPITNPEDVAYSQTMYIIKH >gi|316919538|gb|ADCU01000008.1| GENE 42 44538 - 45257 513 239 aa, chain + ## HITS:1 COG:YPO2340 KEGG:ns NR:ns ## COG: YPO2340 COG2866 # Protein_GI_number: 16122564 # Func_class: E Amino acid transport and metabolism # Function: Predicted carboxypeptidase # Organism: Yersinia pestis # 3 235 20 252 256 332 69.0 3e-91 MGNGVKQIRPRSERGQISAEAITYGHSLLGAPLLYFPAVQPDRETGLIMAGTHGDETTAV IALSCALRSLQPMQQRHHVILAVNPDGCQLGLRANSAGVDLNRNFPAANWLSGTSVYRWN SASSERDVRLSTGDTAGSEPETQALCQLIHRLKPAWVVSLHEPLACVEDPHHSLLGQQLS ADFELPLVSSVGYETPGSFGSWCADLGLPCITLELPAISADLASEKYLPALLALIDYDL >gi|316919538|gb|ADCU01000008.1| GENE 43 45267 - 46232 870 321 aa, chain - ## HITS:1 COG:YPO2341 KEGG:ns NR:ns ## COG: YPO2341 COG4948 # Protein_GI_number: 16122565 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Yersinia pestis # 1 321 1 321 324 422 66.0 1e-118 MKTMRFYSEVWPLHTPFVIARGSRTEAYVVVVEIEKDGVVGIGECTPYARYGEDVESVLA QLASVQSAVEHGIDRRELQMRLPAGAARNAVDCALWDLICKQTNTTLWEQCNVPQPTQIR MAQTVSIGSPEQMASTALSLSQQGATLLKIKLDDHLITERLMAIRAAVPETTLIVDANES WQAEGLAARCQLLADVGVAMLEQPLAAKQDDALAHFIHPLPICADESCHTCSDFSALKGR YDMVNIKLDKTGGLTEALALRSLAQKEGMAIMLGCMICTSRAIRAALPLAPAAKFVDFDG PTWLAQDSQPALNFSCGGIQL >gi|316919538|gb|ADCU01000008.1| GENE 44 46405 - 46908 547 167 aa, chain + ## HITS:1 COG:YPO2342 KEGG:ns NR:ns ## COG: YPO2342 COG2077 # Protein_GI_number: 16122566 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Yersinia pestis # 1 167 1 167 167 276 84.0 1e-74 MTQTVHFQGNPVHVAGQLPQAGDKAKPFKLVAKDLSDVDLASLAGKRKILNIFPSIDTGV CAASVRKFNQLASQTENAVVLCISADLPFAQSRFCGAEGLNNVITLSTLRGGDFKHDYGV AISDGPLAGLTARAVVVLDSHDNVVYSQLVNEITEEPDYDAALAALK >gi|316919538|gb|ADCU01000008.1| GENE 45 46967 - 48553 1610 528 aa, chain - ## HITS:1 COG:YPO2344 KEGG:ns NR:ns ## COG: YPO2344 COG3283 # Protein_GI_number: 16122568 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulator of aromatic amino acids metabolism # Organism: Yersinia pestis # 1 526 1 525 525 826 77.0 0 MRLEVFCEDRIGLTRELLDLLAARNIDLRGIEIDTIGRIYLNFNELDFEVFRQLMAEIRR ISGVTDVRTVPYMPSEREHRAMWALLESLPEPVFSIDMKGKVELANQAALTLFGTTEDKI CNQTAGGLIGGYNFLRWLENETVAPHAEKVVIRGQDYLMDITPIYLGDEKGEMSAPVGAV VVLKSAVRIGRQLQNLTVNDDSEFEHIIGVSPKMRQVLEQARKLAMLDAPLLIVGDTGTG KDVLARACHLRSPRGKQPFLALNCAALPDDVAESELFGHAAGAYPNALEGKKGFFEQANG GSVLLDEIGEMTPRMQTKLLRFLNDGTFRRVGEEHEVSVDVRVICATQKNLIDLVQRGLF REDLYYRLNVLTLNLPPLRERTQDIMPLTELFVSRFADEQGMPRPRLAPELNGFLCQYGW PGNVRQLKNAIYRALTQLEGYELRPQDVVLPEFEAEMALGDEVLDGSLDDICKRFERSVL TRLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSSRRHTETHPDSEEA >gi|316919538|gb|ADCU01000008.1| GENE 46 48885 - 49427 512 180 aa, chain + ## HITS:1 COG:no KEGG:Spro_1873 NR:ns ## KEGG: Spro_1873 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 178 1 178 186 199 56.0 3e-50 MIIRQATPADYDSILEIQRLNTPENLDAENLQQGYIVSQMSRAQLEAINGKLGILVAVEG KTVAGFVCMTATCAKPHPPVIDALLEVAEHNSLNQRPLNELTPFLYGPVCISRRFRGAGV LSQLFAAVKDHMHQKYDAGLAFIADDNPHSLVAHVQGLGMTDVTRFHFGGKDYHLVAFEV >gi|316919538|gb|ADCU01000008.1| GENE 47 49488 - 50330 714 280 aa, chain + ## HITS:1 COG:ECs3387 KEGG:ns NR:ns ## COG: ECs3387 COG2897 # Protein_GI_number: 15832641 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli O157:H7 # 1 278 54 330 334 352 61.0 6e-97 MANTFFVTAEWLAVHLDDADIQLIDARMAPAGQEHLRNMEAEYNTSHLPGARFFDIEALS DHSSPLPHMMPTAEKFAADMQALGISSEKHLVVYDEGNLFSAPRVWWMLRSFGVKKVSIL AGGFNAWKVQQFPLESGMPAKNHATFVAQLDPLVVKNANDVLLATQNDSVQIIDARPAAR YNGEVDEPRPGLRRGHIPTSRNVPWGDLVQDGALKPNERLKAIFTDAGVNFEQPIIASCG SGVTAAVVVLALTTLQANDVALYDGSWSEWGARKELPVSR >gi|316919538|gb|ADCU01000008.1| GENE 48 50434 - 51144 391 236 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_0645 NR:ns ## KEGG: YPDSF_0645 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 23 234 34 245 255 255 57.0 1e-66 MRSWCWGAIALLFSLGVHASEGRVEAGSYHNFWLWSAVRSQPVLKQAQVLYLHQAEIMTR RGKPALYKRGLPYSAIVVPDVWISVRVSTLDIPDSMVNALLKLCRNWEAAGTHVVGIQID FDAASYRLDQYSVFLLKLKSKLPTGYKLGVTGLLDWAKTGSVEQLNQLPVDEVVIQTYQG RHTVTRYQEYLPALRGLNIPFKIGLVQNGVWDRRWQRYFATSPNYLGEVVFLLNEQ >gi|316919538|gb|ADCU01000008.1| GENE 49 51141 - 53294 1612 717 aa, chain - ## HITS:1 COG:no KEGG:PC1_0134 NR:ns ## KEGG: PC1_0134 # Name: not_defined # Def: hypothetical protein # Organism: P.carotovorum # Pathway: not_defined # 1 717 1 724 724 507 43.0 1e-142 MKQKKWFFGAVVLVASHQVFASMDVDECEWWAEGCNMASYPFYAPANDTRSNLLMLASER LHFASPFPQLATDERSSRATPFYITRLKTTDGFDETGSIVIPVDAQALMADARKMSINLD GVALEPSYTNVDGGRWVSNNPATLQRFFKQLLADDSLTDEQRRALANERVRLLRDSAEES ALPALPFPADSHAQAFRDYLAGIDAFYRGDFSNAETPFLALKQSSQPWVAETAQYMLFRI ALNQIVEDAVDDMGMFDRTKSNKAAAALALERGDEYLSSFPAGQYVNSVQGLYRRINWYS GDYNALAFNGEKAISQATTPEALQSVINELDARLLGNQYLKPLFIGEPNSPQVTFTQVLK RLRENYQTQTTATQVTAEELAGYKALFEKADMLPAWEYLQTAWTFYLKHDYAAVLNAAAS ADKDAVNDTLLFSQQVLRGLSMQELARWPDAETYWRHLLTIDHSRIQQDYLQYQLANSLA QQGKVDDIFVANSPVVNLAYRSNVLKMLASQNLLRKQVETGQSPEEQIIALHTLLAKELL NADYQGYLQDKPRAELFKQPVRDDMRDVMLSDFNWDGRNAQEGYVCHSLDDIVTTLAQRP KDARALNCLGEYLRVSNLVIPNGYDDGITADLTKAKSQYDDRSVSRLMHYQQVIAMPDAP PEDKSYALYRAVMCYAPTGENDCDQQDIDKNTRKAWFLQLKNDYPGSEWASRLRFYW >gi|316919538|gb|ADCU01000008.1| GENE 50 53595 - 54656 924 353 aa, chain - ## HITS:1 COG:YPO2347 KEGG:ns NR:ns ## COG: YPO2347 COG3768 # Protein_GI_number: 16122571 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 353 1 352 353 525 80.0 1e-149 MSEPIKPRIEFDQPLATEPEVVLKASQQFAAQEADNFLPAEPEVLTEEQEEGRAEGIINA ALKPKRSLWRRMVGAGLALFGVSVIAQGVQWFHQAWIQQDWIALGGTVAGGLIVLAGVGS LVTEWRRLYRLRQRAEERDVARDLLHSHGIGQGKAFCEKLMQQASLDQSHPAVQRWQASL HETHNDREVVELYCKLVQPVLDVQARREISRYAAESTLMIAVSPLALVDMAFIAWRNIRL INRIAALYGIELGYFSRIRLFRLVLLNIAFAGASELVREVGMDWISQDLAARLSARAAQG IGAGLLTARLGIKAMELCRPLPWLENDKPRLGDFRKELITQLKRVAPKKAKES >gi|316919538|gb|ADCU01000008.1| GENE 51 54653 - 56050 890 465 aa, chain - ## HITS:1 COG:YPO2348 KEGG:ns NR:ns ## COG: YPO2348 COG3106 # Protein_GI_number: 16122572 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Yersinia pestis # 1 465 1 465 465 848 85.0 0 MKRLQNEIASLVNRGVDRHLRLAVTGLSRSGKTAFITSLVNQLLHIHSGARLPLFSAVRE ERILGAKRVPQRDLGVARFTYDEGLSQLYGEPPMWPTPTRGVSEIRLALKFRSNDSLLRH FKDTSTLYLEIVDYPGEWLLDLPMLEQDYLSWSRQMNGLLQGQRKEWAEEWLALCAKCDP LAPADEKQLAAISQAYTDYLLRCKNEGQHFIQPGRFVLPGDLAGAPALQFFPWPQVVDVG ESKLAQADKHTNIGMLRSRYHYYCNEVVKGFYKEHFVRFDRQIVLVDCLQPLNSGPQAFN EMRLALTQLMQSFHYGKRTLYRRLFSPCIDRLMFAATKADHVTADQHANLVSLLQQLVQD AWQNAAFEGISMDCAGIASVQATQSGLVDHHGQKIPALKGHRLVDDQPLTVFPGEVPARL PNNEFWQKQGFHFEDFRPQSMNVDSPLPHIRMDSVMEFLLGDKLR >gi|316919538|gb|ADCU01000008.1| GENE 52 56072 - 56323 290 83 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSQFKPADMLRAGGRQARRYLPGLLKNGLLLGLTFAPAGIAAGVLRYVTWRPLRWLLIWG LEPLLQRAVRQATSRYRHGAEKP >gi|316919538|gb|ADCU01000008.1| GENE 53 56354 - 56713 317 119 aa, chain - ## HITS:1 COG:YPO2349 KEGG:ns NR:ns ## COG: YPO2349 COG1983 # Protein_GI_number: 16122573 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Yersinia pestis # 1 119 1 119 119 115 50.0 2e-26 MTMPMSGKKLYRIPERGVVKGVCAGLAEYMGVPVALVRVMAVLSIFCGLFIITAILYMVL AMTLPTASATELSGVQQPTARQQMQVVTVDLNECEQRLRRIERYVTSETFGVNRRFRDL >gi|316919538|gb|ADCU01000008.1| GENE 54 56713 - 56940 305 75 aa, chain - ## HITS:1 COG:no KEGG:ETAE_1865 NR:ns ## KEGG: ETAE_1865 # Name: pspB # Def: phage shock protein B # Organism: E.tarda # Pathway: not_defined # 1 75 1 75 75 117 84.0 9e-26 MGYLFLAIPLTIFVLFVLPVWLWLHYSNRQENDSALQAQEVQRLAQLNEEAQRMRQRISA LESILDAEHPNWRDA >gi|316919538|gb|ADCU01000008.1| GENE 55 57065 - 57730 896 221 aa, chain - ## HITS:1 COG:YPO2351 KEGG:ns NR:ns ## COG: YPO2351 COG1842 # Protein_GI_number: 16122575 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Yersinia pestis # 1 221 1 221 221 243 83.0 3e-64 MGIFSRFADIVNANINTLLDKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLMRR IEQGETQLSEWQEKAELALRKDKEDLARAALIEKQRVSDLLTTLRHEVSNVEETLDRMKR EITELESKLTETRARQQALALRQQAAASSREVRRQLDSGKLDEAMARFEQFERRIDHMEA EAETMGLGKKKSLDQEFADLKADDEIGQQLAALKAKMNRPE >gi|316919538|gb|ADCU01000008.1| GENE 56 57953 - 58954 743 333 aa, chain + ## HITS:1 COG:YPO2352 KEGG:ns NR:ns ## COG: YPO2352 COG1221 # Protein_GI_number: 16122576 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Yersinia pestis # 1 331 1 329 342 483 72.0 1e-136 MPDNIENMLGQANSFLEVLEQTSQLAKLNKPVLIIGERGTGKELIAHRLHYLSHRWQGPF VSLNCAALNDNLLDSELFGHEAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLIQEKL LRVIEYGHLERVGGSQPLQVDVRLVCATNADLPALAAEGTFRADLLDRLAFDVIQLPPLR ERRSDIMLLAEHFAMQMCGELGLSFFPGFSDDARETLLNYSWPGNIRELKNVVERSVYRH GESPELLDAIVINPFKPQTVVLSQPPSGEPTAISASQQPTLPLDLKAWLAASEKQIIIQA LQQSRHNQRQAAQLLNLTYHQLRGIMKKLDIQG >gi|316919538|gb|ADCU01000008.1| GENE 57 59322 - 61109 1522 595 aa, chain + ## HITS:1 COG:YPO2355 KEGG:ns NR:ns ## COG: YPO2355 COG4166 # Protein_GI_number: 16122579 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Yersinia pestis # 40 565 15 541 548 855 81.0 0 MIGLPANVRYTKHFAQQPLEAFMRGLKTLMLALSCLSAVATAADIAPTTKLKPLPDIRQS GFIYCVSGILNTFNPQMASSGLTVDTLAAQLYDRLLDVDPYTYRLIPELAQSWEVLDGGA TYVLHLRKDVPFQTTDWFKPTRKMNADDVVFSFNRMFDPKHPYHNVNGGHYPYFESLQFS DAVQSVRKLDNSTVEIRLKQPDASFLWHLATHYAPILSAEYANNLAKKGKEEEIDRLPVG TGPFMLNEYHAGQYIRLDRNDAFWKGKPRMPQVIIDLGAGGTGRLSKLLTGECDVLAYPA ASQLSILRDDPRLRLTLRPGMNVAYLAFNTRKPPLDNLDVRRAIAYSINNQRLMQSIYYG TAETAASLLPRASWAYDSEAKITEYNPEKSRELLKQAGVTNLHLQLWVPTASQAYNPSPL KTAELIQADMAQVGIKVSIIPVEGRFQEARLSDMSHDMTLSGWATDSNDPDSFFRPLLSC AAIQSQTNLAHWCDPAFDSLLHKALLSQQLSQRIEDYQDAQKILEEQLPILPLASSLRLQ AYRYDIKGLVLSPFGNASFAGVYREKQPEPEATNDPDAGPPTSAADAPAGAEDKP >gi|316919538|gb|ADCU01000008.1| GENE 58 61106 - 62071 606 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 1 318 1 317 320 238 36 3e-61 MIIFTLRRLLLLLVTIFFLSLVGFSLLYFTPHAPLGGASLIDAYSFYVHSLFQGDFGVSS INGQLIVEQLKEVFPATMELCILAFMLALIVGIPLGIIAGLLRGKWQDGAISALALFGYS MPVFWLAILLMLFFSLHLGWLPVSGRYDLLYPMKNVTGFALIDAWLSDSPYRDAMLMSVA RHIILPVTALALVPMTEVIRLMRISTDNVVSQNYIKAAATRGLTRFTIIRRHVLHNALPP IIPKLGLQFSTMLTLAMITEVVFSWPGLGRWMINAIRQQDFAAISAGVMLVGSLVLIVNV LSDIVGALTNPLKHKEWYALR >gi|316919538|gb|ADCU01000008.1| GENE 59 62058 - 62948 863 296 aa, chain + ## HITS:1 COG:sapC KEGG:ns NR:ns ## COG: sapC COG4171 # Protein_GI_number: 16129253 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Escherichia coli K12 # 1 296 1 296 296 417 76.0 1e-116 MHFDNVYREKRVPSPLRQTWLHFHADTLAMIGLYGVLLLIALCFFGSMLAPYALDQQFLG YQLLPPSWSRYGNVSFFLGTDDLGRDILSRLLCGVAPTFGSALIVTLAASIFGVIIGILA GVTHGLRSAILNHILDTLLSIPSLLLAIVVVAFMGPRLEHAMLAVWLALLPHMVREVYTS VHEELEKEYVVAARLDGASTWFILWDSVLPNIAGVLVGEFTRALSMAILDIAALGFLDLG AQLPSPEWGAMLGDSLELVYVAPWTVMLPGAAIMISVLLVNLLGDGMRRAINAGVE >gi|316919538|gb|ADCU01000008.1| GENE 60 62957 - 63952 483 331 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 13 321 28 324 329 190 36 5e-47 MPLLDIRNLTIEFMTAEGPVKAVDRVSLTLTEGEVRGLVGESGSGKSLIAKAICGVTKDN WKVTADRFRFDDIDLLRLTPRQRRRLVGHNVSMIFQEPQSCLDPSESIGKQVIQAIPGWT YKGRWWQRFHWRKRRAIELLHRVGIKDHKDIMRSFPYELTEGECQKVMIAIALANQPRLL IADEPTNAMEPTTQAQIFRLLSRMNQNNNTTILLISHDLQMMSKWADRINVMYCGQTVES ATCEEILVTPHHPYTQALIRAMPDFGRALPHKSRLNTLPGAIPSLEHLPIGCRLGPRCPY AQKKCIETPPLRTVKAHKFACHFPLNMEETQ >gi|316919538|gb|ADCU01000008.1| GENE 61 63949 - 64761 455 270 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 4 252 11 264 329 179 36 8e-44 MSTLLEVHNLQKTFRYRTGLFRRQNLEAVKPVSFTLREGQTLAIIGENGSGKSTLAKMLS GMIEPTAGDIVIDDKQLHYGDFRYRSQRIRMIFQDPSTSLNPRQRIGQILDVPLRLNTEL DAPEREQRINETLRQVGLRSDHAYYYPHMLASGQIQRIALARALILQPQVIVADEALASL DMSMRSQIINLMLELQQKQGIAYIYVTQHLGMMKHISDQVMVMHHGEVVERGSTSEVLAA PLHEQTKRLINSHFGEALTADAWRRDGGVF >gi|316919538|gb|ADCU01000008.1| GENE 62 65036 - 65824 832 262 aa, chain + ## HITS:1 COG:ECs1861 KEGG:ns NR:ns ## COG: ECs1861 COG0623 # Protein_GI_number: 15831115 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Escherichia coli O157:H7 # 1 261 1 261 262 473 91.0 1e-133 MGFLTGKRILITGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKSRVEEFAAQLGSNLV LACDVAEDESIDAMFAELAKSWPKFDGFVHSIGFAPGDQLDGDYVNAVTRDGFKIAHDIS SYSFVAMAKACRTMLNPGASLLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE GIRVNGISAGPIRTLAASGIKNFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSPLAGGI SGEILHVDGGFNIAAMNELELD >gi|316919538|gb|ADCU01000008.1| GENE 63 66028 - 67137 595 369 aa, chain + ## HITS:1 COG:YPO2360_1 KEGG:ns NR:ns ## COG: YPO2360_1 COG4950 # Protein_GI_number: 16122584 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 25 187 82 244 246 109 45.0 8e-24 MERSTSPLTVFSSRSSSSHDVDNSLPLTQGRFPLFDQHADREAYFLLVGDAYTQLLGIAP EITREHSLSHYDRLSIALTVAQVSQVTPLSTFYAKQLAPLHCPHNTRESNQRLAQITEHA RLLAWDPTRSSKQNLRALRAVKLSYPDIVTLSQIIGLVCLQARLIAGTSALSGHPLPSEP TIFPPLELSGLPAELSAAWRPWLPLGADASLSPIAVCGAPSGLAIALMLVSMHNGEAADV STQLFTDGYNCSDRLRQPLRELAFLVSARLNGCRRGSQHHARRYLLLSKHRLQADAVLAD PVSAIAQCSRRERAIIQASITLSQTPYRFTLEHVASLNQSGLTHGEILELIIALATGAWS QRLLVSLGE >gi|316919538|gb|ADCU01000008.1| GENE 64 67277 - 69217 1792 646 aa, chain + ## HITS:1 COG:YPO2235 KEGG:ns NR:ns ## COG: YPO2235 COG4776 # Protein_GI_number: 16122464 # Func_class: K Transcription # Function: Exoribonuclease II # Organism: Yersinia pestis # 1 646 1 644 644 1010 73.0 0 MFQDNPLLAQLKQQLHSQTPRVEGVVKGTDKGFGFLEVDAQKSYFIPPPYMKKVMHGDRV LAAVHTEKDREVVEPEELVEPFLTRFVGRVQKKDGDNRLSIIPDHPLLKDAIPCRADNSV THEFKQGDWVVAEMNRHPLKGDRTFFANITTYITDGGDDFAPWWVTLARHGLDRSAPEWS GSEMHEEGLQREDLTALPFVTIDSASTEDMDDALYVQETEDGSLALTIAIADPTAYVEQG SELDKIAQVRAFTTYLPGFNIPMLPRDLSDDLCSLRANERRPALLCRVTVAQDGAISDDI RFFAGWIESKAKLVYDEVSDYLEGVGSWKPENAQIEQQVRLLHRLADSRSSWRQQHALVF KDRPDYRFVLGEKGSVVDIIAEHRRVANRIVEECMITANVCAAIVLRDRLGFGVYNTHSG FDPALVEQAVSILQANDVAANAEALLTLQGFCELRRHLDSLPTTFLDSRVRRFQTFAEIS TEPGPHYGLGLEAYATWTSPIRKYGDMVNHRLLKALIADKPAQRPDESITVQMAERRRLN RMAERDVGDWLYARFLKDKVDPAIHFNAEIIDISRGGMRVRLVDNGAIAFIPSSFIHAVR DELVCSQETGSLQIKGETVYQTGDNLQVYLTEVRMETRSIIAKPVA >gi|316919538|gb|ADCU01000008.1| GENE 65 69573 - 70160 686 195 aa, chain + ## HITS:1 COG:YPO0670 KEGG:ns NR:ns ## COG: YPO0670 COG2249 # Protein_GI_number: 16120995 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Yersinia pestis # 1 189 1 189 194 296 70.0 2e-80 MSKIFLINGMKAFGHSKGQLNTTLHEVAKETLSALGHELRETTIDHGYEVEQEIENYLWA DVVIYQMPGWWMGEPWIVKKYIDEVFTEGHGRLYASDGRTRSDANKKYGSGGLIQGKQHM LSLTWNAPQEAFDDPDQFFHGQGVDGLYMHFHKANEFLGMTRLPTFLCTDVIKNPNVEHN IACYRDHLATVFGQK >gi|316919538|gb|ADCU01000008.1| GENE 66 70170 - 70496 337 108 aa, chain + ## HITS:1 COG:STM3180 KEGG:ns NR:ns ## COG: STM3180 COG1359 # Protein_GI_number: 16766480 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 98 1 100 104 84 46.0 6e-17 MITVIAEIKVRSGHLDEIVKRFQALQAEVLAEEGCYQYAPLTDTLPAIEPQTLAPDTIFM LERWGSHAHLDAHLKTAHMVRHHKETQDQVESVTLRILTDRSAISTQK >gi|316919538|gb|ADCU01000008.1| GENE 67 70660 - 71892 1308 410 aa, chain - ## HITS:1 COG:YPO1631 KEGG:ns NR:ns ## COG: YPO1631 COG2195 # Protein_GI_number: 16121899 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Yersinia pestis # 1 409 1 409 411 722 82.0 0 MNNLLDRFFNYVSFDTQSKSGVRQVPSTDGQMKLARALKAELVELGFEQVTLSDHGCVMA TLPSNVSWKAPTIGFISHLDTAPDASGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVL HQLLGQTLITTDGKTLLGADDKAGIAEIVTAMLRLKHNNVPHGDIRIAFTPDEEVGKGAQ FFDVEAFDAEWAYTVDGGGVGELECENFNAASVTIKIVGNNVHPGTAKGVMVNALSLAAR IHNELPPEQTPENTEGYEGFYHLASMKGTVEKAEMHYIVRDFSREGFEARKKTIMDIAKK VGKGLHRDCYIEVTLDDSYYNMRDEVAKHPHIIELAQQAMHDVGIEPIMCPIRGGTDGAQ LSFRGLPCPNLFTGGYNFHGKHEFITLEGMEKAVSVIMRIAELTALKAKG >gi|316919538|gb|ADCU01000008.1| GENE 68 72594 - 73733 1135 379 aa, chain + ## HITS:1 COG:ECs1571 KEGG:ns NR:ns ## COG: ECs1571 COG3842 # Protein_GI_number: 15830825 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 15 377 16 376 378 605 83.0 1e-173 MTEISSLGSNAAPQPVVRLTGIRKSFDDKDIITDLDLTINHGEFLTILGPSGCGKTTVLR LIAGLEDVDDGRVILDGEDITHLPAEQRHVNTVFQSYALFPHMTVLDNVAFGLRMQKRPE AEIKPRALEALRMVQLEEFAQRRPHQLSGGQQQRVAIARAVVNKPRVLLLDESLSALDYK LRKQMQNELKALQRKLGITFIFVTHDQEEALTMSDRIVVMRDGKIEQDGTPREIYEEPKN LFVASFIGEINIFDAEVLHRVDEHRVRANVEGRECNIYVDAAMEVSPGDKLNVLLRPEDV RVEEIHHGQHVDGIIGYVRERNYKGMTLESTVELENGKMVLVSEFFNEDDPDVDHSLNQK MAVTWVESWEVVLADEEVA >gi|316919538|gb|ADCU01000008.1| GENE 69 73717 - 74577 637 286 aa, chain + ## HITS:1 COG:STM1225 KEGG:ns NR:ns ## COG: STM1225 COG1176 # Protein_GI_number: 16764580 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Salmonella typhimurium LT2 # 3 283 2 282 287 404 81.0 1e-113 MKKSRKYFQNVVITGVVAWLVLFVFMPNLMIIATSFLTRDDAHLVKMVFSLDNYTRLFDP LYAEVLLHSLNMAVIATLCCLVIGYPFAFILARLPERVRPLLLFLLIVPFWTNSLIRIYG LKLFLSTRGYLNEFLLWTGIIDTPLRIMYTPEAVILGLIYILLPFMVMPLYSSIEKLDKS VLEAARDLGANKLQTFIRIIIPLTMPGIVAGSLLVMLPSLGLFYVSDLLGGAKNLLIGNV IKSQFLNIRDWPFGAATSICLTLVMGILLYIYYRVGKLMNKKVELE >gi|316919538|gb|ADCU01000008.1| GENE 70 74574 - 75359 715 261 aa, chain + ## HITS:1 COG:ECs1500 KEGG:ns NR:ns ## COG: ECs1500 COG1177 # Protein_GI_number: 15830754 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Escherichia coli O157:H7 # 1 256 1 256 264 377 90.0 1e-105 MIGRLLRGGFMSIVYAYLYIPIIILIANSFNSSRFGINWKGFTFDWYSTLMNNDSLLQAA GHSITMAVLSATFATLIGSLTAVALFRYHFRGKPFVSGMLFVVMMSPDIVMAISLLVLFM LLGVSLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFIILRKILLPL AMPAVAAGWLLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVL SLVLVLGSQFILRDRTASKPL >gi|316919538|gb|ADCU01000008.1| GENE 71 75690 - 76979 1179 429 aa, chain + ## HITS:1 COG:STM2558 KEGG:ns NR:ns ## COG: STM2558 COG0531 # Protein_GI_number: 16765878 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 426 21 437 443 555 69.0 1e-158 MGSGIALLPANLAKIGSIALFGWFITLIGAMSLAYVFARLTTRDPQVGGPIAYAGRLGPA FGFQTAVLYYHANWIGNLADCLAGVAYLSVFFPALNQPIPAGIASIVIIWIMALVNMMGG NWVSRLTTLGLILVLVPVIGTAVAGWHWFDPALYQANWNTSGQADSKAIMHSILICLWAF VGVESAAVSSGLVKNPQRTVPIATMLGTALAGIVYILATQVMSGMFPADVMSKTGAPFAA STSMMIGSWAAPVVSAFTAFACLAALGSWMMLVGQAGVRAARDGNFPKIYGEVDSHGVPR KGIILSAIKMTLLMAFMTFMSAKGSNSSDIFGELIGIAVLLTMLPYFYSCVALIRMEGAS LKNIVSVIAATLGCVFCFVALSGAENIKLTATFIISLSILMFYARKQGEHEKAYAIQQKQ NPPPDDRLG >gi|316919538|gb|ADCU01000008.1| GENE 72 77211 - 78275 1021 354 aa, chain + ## HITS:1 COG:potD KEGG:ns NR:ns ## COG: potD COG0687 # Protein_GI_number: 16129086 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 354 1 348 348 562 81.0 1e-160 MKKWSPLVAAGLLALGVNAAIAADAPKTENDNNTVYFYNWTEYVPPGLLEQFTKETGIKV IYSTYESNETMYAKLKTYKSGAYDLVVPSTYFVSKMSKEGMLQKIDKTKLSNFHNLDPNL LHKPFDPENDYSIPYIWGATAIGVNSDAIDPKSVTRWADLWKPEYKGSLLLTDDAREVFQ MALLKLGYSGNTTDPKQIEAAYEELKKLMPNVLAFNSDNPANPYMEGEVNLGMVWNGSAY VAREAGTPLEVVWPKEGGIFWMDSLSIPANAKNPEGALKLINFLLRPDIAVQVAKTIGYP TPNLAAQKMLPASISGDKSLYPDAETIAHGEWQNDVGSASEIYENYFQKLKAGR >gi|316919538|gb|ADCU01000008.1| GENE 73 78395 - 79444 943 349 aa, chain - ## HITS:1 COG:STM2141 KEGG:ns NR:ns ## COG: STM2141 COG1830 # Protein_GI_number: 16765470 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 349 1 350 350 618 88.0 1e-177 MTDIAKLLGKEANSLLEHRCTTIPSDQLYLPGADFVDRVMIDNNRSPRVLAAMQNLYNTG RLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIQAGCNCVASTYGVLAAVS RRYAHKIPFLVKLNHNETLSYPTQYDQTLYASVEQAFNLGAQAVGATIYFGSAESRRQIE EISAAFERAHELGMVTVLWAYLRNPAFVKDGVDYHSSADLTGQANHLAATIGADIVKQKM AENNGGYKAVKFGYTDERVYTKLTSDHPIDLVRYQLANCYMGRAGLINSGGAAGENDIQE SVRTAVINKRAGGMGLILGRKAFKKSMKDGVALINAVQNVYLDKKVTIA >gi|316919538|gb|ADCU01000008.1| GENE 74 79795 - 80337 495 180 aa, chain - ## HITS:1 COG:YPO1616 KEGG:ns NR:ns ## COG: YPO1616 COG3150 # Protein_GI_number: 16121884 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Yersinia pestis # 1 179 1 179 180 315 78.0 3e-86 MIIYLHGFDSTSPGNHEKVMQLQFIDPDVRLISYSTRHPRHDMQHLLKEVDKVVQQAGDA HALICGVGLGGFWAERIGYLCGIRQVMFNPNLFPQENMMGKIDRPEEYLDIATKCVENFR EKNRERCLAVLSRHDEVLNSQRSAEYLQPFYEIVWDEQQTHKFKSLSQHLQKIRAFKTVS >gi|316919538|gb|ADCU01000008.1| GENE 75 80408 - 81427 876 339 aa, chain - ## HITS:1 COG:ycfO KEGG:ns NR:ns ## COG: ycfO COG1472 # Protein_GI_number: 16129070 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Escherichia coli K12 # 1 339 1 339 341 534 78.0 1e-151 MGPVMLDVAAYELDAEEREILQHPLVGGLILFTRNFHDAQQLRELVRQIRAASRNHLVIA VDQEGGRVQRFREGFTRLPAAQSFAALNSDAEGRRLAQEAGWLMACEMIAMDIDISFAPV LDLGHGSAAIGERSFHEKPEIAVRMAESFIDGMHEAGMKTTGKHFPGHGAVTADSHKETP IDPRPLEEIINHDMVIFNQLNSRGKLDAVMPAHVIYPQADARPASGSPYWLKQVLRQQLG FNGVIFSDDLSMEGAAVMGSYAERGQASLDAGCDMILVCNHREGAVSVLDNLAPITAERV SSLYHNGKLTREELMASPRWKAAHQELEQLHQRWVDSKA >gi|316919538|gb|ADCU01000008.1| GENE 76 81504 - 82382 423 292 aa, chain - ## HITS:1 COG:YPO1614 KEGG:ns NR:ns ## COG: YPO1614 COG0510 # Protein_GI_number: 16121882 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted choline kinase involved in LPS biosynthesis # Organism: Yersinia pestis # 29 273 7 253 268 177 39.0 3e-44 MSNVFESSLTSVRAVLARRFSLVDPLEWQISQVEGLTGINWKVSTPAGHAYLLRPQTQQK TQLGINRKRESHALRLAADAAIAPQCLGIDAGWLITEWIHGQALTDTNYFSHLPALAEKI VALHRLKPTGQARDFHRHCQRYYQLSSPHWFTPQALSIHQYWQSRALPTPLKFALLHMDI HPGNIIQTSSGLRLIDWEYAAVGDIALDLAAMYRSFGWTEPQQRYFTDLYVRAGGYADIE KLQQHVQCWLPRVDYMAWLWYEVRWQQSKQNSFREAANLLLSQLLAQREAGR >gi|316919538|gb|ADCU01000008.1| GENE 77 82387 - 82986 509 199 aa, chain - ## HITS:1 COG:ECs1483 KEGG:ns NR:ns ## COG: ECs1483 COG3417 # Protein_GI_number: 15830737 # Func_class: R General function prediction only # Function: Collagen-binding surface adhesin SpaP (antigen I/II family) # Organism: Escherichia coli O157:H7 # 1 199 4 212 213 159 47.0 4e-39 MKKLLSVTFAALLLAGCQITTKQGSETTTEPAQPTQTQPPVTAPTTPVEQPPVTTVPTPP KVQSFNWSGSLTPLINQMLSSPDVAAGSVLLVDNVQNQTNGSIQVSNATAELKKALQQGN KFTLVPANQVTSAKQSLGLSAEDSLGSRRKAIGLARIVNAQYVLYSAIDGDVQSPKIAMQ LMLVQTGEIIWSGNGAVTR >gi|316919538|gb|ADCU01000008.1| GENE 78 83017 - 83406 315 129 aa, chain - ## HITS:1 COG:STM1206 KEGG:ns NR:ns ## COG: STM1206 COG5633 # Protein_GI_number: 16764561 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Salmonella typhimurium LT2 # 10 129 6 124 124 102 44.0 2e-22 MRVSFTGFALAAFLPLALLAGCSAPSHIAVSDGQRVVMDPSVLTAGITADNPTVSSGDLY PVAYANVNYGQEQKSITLNYRFYWYDVKGLDIFPHEPPRTITLKPGQNVRLESTSANTRA KQVRLYLYL >gi|316919538|gb|ADCU01000008.1| GENE 79 83462 - 83812 443 116 aa, chain - ## HITS:1 COG:YPO1611 KEGG:ns NR:ns ## COG: YPO1611 COG0537 # Protein_GI_number: 16121879 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Yersinia pestis # 1 114 1 114 117 194 85.0 4e-50 MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPSHILIIPNQLIPTVNDVKPEHEA ALGRMITVAAKIAQQEGISEDGYRLIINCNRHAGQEVYHIHMHLLGGRALGPLLAR >gi|316919538|gb|ADCU01000008.1| GENE 80 84020 - 85024 848 334 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 329 1 325 329 331 51 2e-89 MSQSSENKKVLLEVTDLKVHFDVKDNKAWFWQPAKTLKAVDGVTLRLYEGETLGVVGESG CGKSTFARALIGLVKATDGRVAWLGKDLLGMDAKHWHEVRNDIQMIFQDPLASLNPRMTI GEIIAEPLKTYHPKMSRQEVKDRVRNMMMKVGLLPNLINRYPHEFSGGQCQRIGIARALI LEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL GHAVELGTYDEVYHNPQHPYTKALMSAVPVPDPDLERNKKIQLLEGELPSPINPPSGCIF RTRCPIAGPECALTRPLMEGSFRHAVSCLKVDPL >gi|316919538|gb|ADCU01000008.1| GENE 81 85021 - 86010 588 329 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 309 1 311 329 231 39 3e-59 MMTTDKSAERLLAVKDLRVTFSTNDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFA LMGLLAQNGRIGGSALFNGREILNLPEKQLNKLRAEEIAMIFQDPMTSLNPYMRVGEQLM EVLMLHKGMSKAQAFEESVRMLDAVKMPEARKRMRMFPHEFSGGMRQRVMIAMALLCRPK LLIADEPTTALDVTVQAQIMTLLNELKSEFNTAIIMITHDLGVVAGICDKVLVMYAGRTM EYGQARDVFYAPSHPYSIGLLNAVPRLDGENESLLTIPGNPPNLLRLPKGCPFQPRCPHA TEQCMQMPPLESFGEGRLRACFRTVEELA >gi|316919538|gb|ADCU01000008.1| GENE 82 86022 - 86930 1029 302 aa, chain - ## HITS:1 COG:STM1744 KEGG:ns NR:ns ## COG: STM1744 COG1173 # Protein_GI_number: 16765088 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 302 1 302 302 484 89.0 1e-137 MLLNKKNAQVVENFGEQLEVEGRSLWQDARRRFVHNRAALASLFVLGLIALFVVFAPMLS QFAYDDTDWGMMSAAPDMVSGHYFGTDSSGRDLLVRVAIGGRISLMVGIAAALVAVVVGT LYGAMAGYIGGKTDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA RIVRGQTLSLKRKEFIEAALVGGVSTRKIVTRHIVPNVLGVVVVYASLLVPSMILFESFL SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLMYPAAFLVVTLFCFNFIGDGLRDALDPK DR >gi|316919538|gb|ADCU01000008.1| GENE 83 86946 - 87866 789 306 aa, chain - ## HITS:1 COG:STM1745 KEGG:ns NR:ns ## COG: STM1745 COG0601 # Protein_GI_number: 16765089 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 306 1 306 306 509 91.0 1e-144 MLKFIFRRLLEAIPTLFILITISFFMMRLAPGSPFTGERALPPEVLANIEAKYHLNDPIW KQYGHYLVQLGHGDFGPSFKYKDYSVNDLVSASFPVSAKLGFAAFILAVVLGVTAGVLAA LKQNSKWDYAVMGVAMTGVVIPSFVVAPLLVLIFAIQLKWLPGGGWNGGALKFMILPMVA LSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYLGPAF VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVI DPKIRY >gi|316919538|gb|ADCU01000008.1| GENE 84 88118 - 89755 1712 545 aa, chain - ## HITS:1 COG:YPO2182 KEGG:ns NR:ns ## COG: YPO2182 COG4166 # Protein_GI_number: 16122412 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Yersinia pestis # 1 545 1 545 545 843 76.0 0 MSKHIKKKLLTVSVMAALGMFTAAQVQAADVPAGVKLAAKQELVKNNGSEVQSLDPHKIE GVPENNVTNDLMEGLTQHDTQGKTIPGTAASWDNKDFKVWTFHIRPDAKWSNGKPVTAED FVYSWQRIVDPKTASPYASYLQYAHVENVDDIIAGKKDKSTLGVKALDDKTFQVTLTEPV PYLAEMTSHYAMKPVNKEAVEKFGDKWTLPENYVSNGAYKLKDWVVNERIVLERNPEYWD NAKTVINKVTFLPIASEVTDVNRYRTGEIDLTYNNMPIELFQKLKKEIPNEVKADPYLCT YYYEINNQKPPFNDERVREALKLGLDRDIIVNKVKNQGDLPAYGFTPPYTDGAKLTPPEW FGWSQEKRNEEAKKLLAEAGYGPDKPLTFNLLYNTSDLHKKLAIAAASIWKKNLGVNVKL ENQEWKTFLDTRHQGTYDVSRAAWCADYNEPSSFLNMMLSDSSSNTPHYKSAAFDKIMAG ALQTNSKEARAGVYQQAEQQLDKDSVIVPVFYYVNARLVKPYVGGYTGKDPQDNVYDKNL YIIEH >gi|316919538|gb|ADCU01000008.1| GENE 85 90582 - 91229 456 215 aa, chain - ## HITS:1 COG:YPO2181 KEGG:ns NR:ns ## COG: YPO2181 COG2095 # Protein_GI_number: 16122411 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Yersinia pestis # 2 215 1 214 214 329 88.0 2e-90 MVSQSLLDLSGYIKFFVGLFALVNPVGILPVFISMTSYQAVAARNKTNLTANMSVAIILI SSLLLGDSILMFFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAIRENVG VVPLALPLMAGPGAISSTIVWSSRYHGWQNLLGFSAAIIVFAFCCWLLFRAAPLLVRLLG QTGINVITRIMGLLLMALGIEFIVTGLRSIFPGLL >gi|316919538|gb|ADCU01000008.1| GENE 86 91810 - 94479 2850 889 aa, chain + ## HITS:1 COG:YPO2180_2 KEGG:ns NR:ns ## COG: YPO2180_2 COG1454 # Protein_GI_number: 16122410 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Yersinia pestis # 451 889 1 441 441 824 92.0 0 MAVTNIAELDALVARVKKAQREFANYTQEQVDKIFRAAALAAADARIPLAKLAVEESGMG IVEDKVIKNHFASEYIYNAYKDEKTCGILSQDDTFGTITIAEPIGIICGIVPTTNPTSTA IFKALISLKTRNGIIFSPHPRAKNATNKAADIVLQAAIAAGAPKDIIGWIDQPSVELSNQ LMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVVDETADIKRVVASILMSKTF DNGVICASEQSVIVVDSVYDAVRERFATHGGYMLQGKELKAVQDIILKNGGLNAAIVGQP ATEIAKMAGITVPATTKILIGEVKVVDESEPFAHEKLSPTLAMYRAKNFEEAVAKAEKLV EMGGIGHTSCLYTDQDNQPERVNYFGEKMKTARILINTPASQGGIGDLYNFKLAPSLTLG CGSWGGNSISENVGPKHLMNKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVASDGAK RAFIVTDRFLFNNGYADQITKVLKGHGIETEVFFEVEADPTLSIVRKGAELMNSFKPDVI IALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSG TGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMNMPKSLCAFGGLDAVTHALE AYVSVLANEYSDGQALQALKLLKENLPASYAEGAKNPVARERVHNAATIAGIAFANAFLG VCHSMAHKLGSEFHIPHGLANALLISNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIAD HLGLSAPGDRTAAKIAKLLIWLDSIKAELGIPASIREAGVQEADFLAKVDKLSEDAFDDQ CTGANPRYPLISELKQILMDTYYGREFSESLEVETVKAPAAKPEKKSKK >gi|316919538|gb|ADCU01000008.1| GENE 87 94851 - 95396 493 181 aa, chain - ## HITS:1 COG:YPO2176 KEGG:ns NR:ns ## COG: YPO2176 COG1435 # Protein_GI_number: 16122407 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Yersinia pestis # 1 180 11 190 196 302 80.0 2e-82 MNAGKSTALLQSSYNYQERGMRTLVFTAEIDNRFGVGKVSSRIGLSSQAQLYNSQTALFD MIRQENESLPVNCVLVDECQFLTKDQVNQLSDVVDSLDIPVLCYGLRTDFRGELFGGSQY LLAWADKLVELKTICHCGRKANMVLRLDEHGNALKDGEQVVIGGNESYVSVCRKHYKDAL A >gi|316919538|gb|ADCU01000008.1| GENE 88 96046 - 96453 625 135 aa, chain + ## HITS:1 COG:ECs1739 KEGG:ns NR:ns ## COG: ECs1739 COG2916 # Protein_GI_number: 15830993 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Escherichia coli O157:H7 # 1 135 1 135 137 174 86.0 4e-44 MSEALKILNNIRTLRAQARECSLETLEEMLEKLEVVVKERREEDSQAQAEIEERTRKLQQ YREMLIADGIDPNELLQSMAAGKAPGKAKRAARPAKYQYVDENGETKTWTGQGRTPAVIK HAIEEQGKSLDDFLL >gi|316919538|gb|ADCU01000008.1| GENE 89 97237 - 98088 751 283 aa, chain - ## HITS:1 COG:ECs1738 KEGG:ns NR:ns ## COG: ECs1738 COG1210 # Protein_GI_number: 15830992 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Escherichia coli O157:H7 # 1 276 22 295 302 459 81.0 1e-129 MLPATKAIPKEMLPLVDKPLIQYVVNECIAAGINEIILVTHSSKNSIENHFDTSFELEAM LEKRVKRQLLAEVQSICPKHVTIMQVRQGLAKGLGHAILCAYPLVGDEPFAVILPDVILD EYTSDLSKDNLSEMLSRYEETGHSQIMVEPVPMENVSNYGVADCSGVDLKAGESTPMKAV VEKPARDKAPSNLSIVGRYVLSPEIWPLLSKTPPGAGEEIQLTDAIAMLMKKETVEAYHL KGLSHDCGNKMGYMQAFVEYGMRHASLGKEFTSWLKSLDLNDE >gi|316919538|gb|ADCU01000008.1| GENE 90 98370 - 99386 651 338 aa, chain - ## HITS:1 COG:STM1753_1 KEGG:ns NR:ns ## COG: STM1753_1 COG0784 # Protein_GI_number: 16765097 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Salmonella typhimurium LT2 # 1 131 1 131 134 160 54.0 3e-39 MAQPLESKRILIVEDDPVFRSVLTGYLQAQGALVQEAANGIEALSLLDSYIPDAILCDLA MPEMGGIEFVKRLREKGLQTPVVVISATEEMADVANAMRLGVRDVLLKPITDLSRLQETL LSCFYPDLFDSPALEKDELAHDWELLSRDPEYAARLLKQLQPPVQQTICGCKVNYRQLTS FNNLGLVLDIAPLSDTDLAFYCLDISRAGENGILAALMVRAIFNGLLQEQLAHQQQRLPQ MSTILKQVNQLLRQANLEGQFPLLAGYYHTQLQNLILVSAGLHAKIHAGEHLIQLSSGVP LGTMGSIHVNQVSQRCSHWQSQIWGAGGHLKLMLTSPQ >gi|316919538|gb|ADCU01000008.1| GENE 91 99630 - 100127 265 165 aa, chain + ## HITS:1 COG:YPO2172 KEGG:ns NR:ns ## COG: YPO2172 COG3012 # Protein_GI_number: 16122403 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 15 165 4 154 154 179 52.0 2e-45 MLSSSISSSLSDDALCPCGSGKTYAQCCGPIIGGQSFAVEAEQLMRSRYTAYVTHNADYL IDSWHPDCQMQSQRAAIEESFSDTKWLGLTIVKTDKGRNEDEGFVEFFARYSSETEQQNN SIHECSRFIRLNQRWYYVDGTKPQVGRNDPCPCGSSKKYKKCCGQ >gi|316919538|gb|ADCU01000008.1| GENE 92 100177 - 101025 792 282 aa, chain + ## HITS:1 COG:ECs1734 KEGG:ns NR:ns ## COG: ECs1734 COG0788 # Protein_GI_number: 15830988 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate hydrolase # Organism: Escherichia coli O157:H7 # 6 282 4 280 280 484 84.0 1e-137 MSQPVVQRKVLRTICPDAKGLIAKITNICYKHQLNIIQNNEFVDHLTGRFFMRTELEGIF NDETLLADLDGALPSGSERELTVAGRQRIVVLVTKEAHCLGDLLMKSAFGGLDVEIAAVI GNHATLQSLVERFDIPFTLVSHEGLSREEHDAAMVGEIKKHAPDYVVLAKYMRILTPDFI SHFPNQIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHFVNNDLDEGPIIMQDVINVD HTYTADEMMRAGRDVEKNVLSRALYRVLAQRVFVYGNRTVIF >gi|316919538|gb|ADCU01000008.1| GENE 93 101441 - 101776 66 111 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTEPYCWREKQWYSGLVQGIQEDDSECDNLNERDASQLSPWGICDFCVCMGLHCYKKGWW WGKDDSSLRSSPYGPSQATLFRCAQLEPYRRFSTFPMGNMRFLCSYGIVLL >gi|316919538|gb|ADCU01000008.1| GENE 94 101775 - 102344 556 189 aa, chain + ## HITS:1 COG:PA4923 KEGG:ns NR:ns ## COG: PA4923 COG1611 # Protein_GI_number: 15600116 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Pseudomonas aeruginosa # 4 188 5 189 195 210 56.0 1e-54 MRNNICVFCGASEGVSPAYADAAKRLGHTLAQQGRRLVYGGGNKGLMGILANAVLDAGGE VHGVIPQRLVEAETAHYGLTSLDIVPDMHTRKARMAELSDGFIALPGGIGTLEELFEIWT WSQIGYHTKPIALMDVNGYYAKLIEFLRFSAEQGFVRQQYIDTLMCLQDPLALLDQFDRY QPHNLNRWA >gi|316919538|gb|ADCU01000008.1| GENE 95 102482 - 103291 701 269 aa, chain + ## HITS:1 COG:YPO2168 KEGG:ns NR:ns ## COG: YPO2168 COG0708 # Protein_GI_number: 16122400 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Yersinia pestis # 1 268 1 268 268 481 81.0 1e-136 MKFISFNINGLRARPHQLEAIIAKHQPDVIGLQETKVHDDMFPLADLEHLGYHIFYHGQK GHYGVALLTKEQPLAVRKGFPTDEEDAQRRIIMADIATPTGVLTVINGYFPQGESRDHPI KFPAKTKFYQDLQNYLETEQTPAGQVIVMGDVNISPTDSDIGIGEENRKRWLRTGKCSFL PEEREWMDRLKNWGLIDTYRQANPERNDQFSWFDYRSKGFDENRGLRIDLVLASQSLAER CIDTGIDYEIRGMEKPSDHAPIWADFKLA >gi|316919538|gb|ADCU01000008.1| GENE 96 103297 - 103719 378 140 aa, chain + ## HITS:1 COG:STM1301 KEGG:ns NR:ns ## COG: STM1301 COG0494 # Protein_GI_number: 16764652 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 5 129 2 126 138 149 60.0 2e-36 MTASVKPIDVVAAIVEFRGKILLAQRGDHKDQAGLWEFPGGKVEPGETQPEALCRELREE LSVTCSVADYVASSTLKLENKTIHLHAWRVQHTDGEFTANEHAALVWVTPQEAESYHLAP ADVPLLKAYRTKLESLSQQD >gi|316919538|gb|ADCU01000008.1| GENE 97 103781 - 104080 331 99 aa, chain - ## HITS:1 COG:no KEGG:NT01EI_1651 NR:ns ## KEGG: NT01EI_1651 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 27 99 42 108 109 92 64.0 3e-18 MNKSSIGFWVLPVVLLSASAWANHNKGIDVVVPVSPEILNNANGYSNTESNVNCPRCCIY DNRSYSEGAVVKAEGVLLQCTADKNVLSTNNLRWVVLRK >gi|316919538|gb|ADCU01000008.1| GENE 98 104077 - 105996 1442 639 aa, chain - ## HITS:1 COG:YPO2165 KEGG:ns NR:ns ## COG: YPO2165 COG0550 # Protein_GI_number: 16122397 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Yersinia pestis # 1 639 2 642 642 1070 80.0 0 MRLFIAEKPSLARAIADVLPKPHRRGDGYISCGSGDTVTWCIGHLLEQAEPDAYDTRYAR WNLADLPIVPEKWQLKPKPSVAKQLNVIKRLLGEAEQVIHAGDPDREGQLLVDEVLDYLE LAPEKRQNVQRCLINDLNPQAVERAVSRLRDNREFIPLCVSALARSRADWLYGINMTRAY TILGRNAGYNGVLSVGRVQTPVLGLVVRRDEEIENFVSKDFYEVKAHIVTPAEERFTAMW VPSESCEPHQDEEGRLLNKALAEHVIKRIEGQPAMVTGYNDKRESETAPLPFSLSTLQIE AAKRFNLSAQQVLDLCQRLYETHKLITYPRSDSRYLPEEHFAGRHAVMNAIASHVPELQQ VAAVDPDKRNRCWDDKKVDAHHAIIPTARAGNINLSDDERKIYTLVARQYLMQFCPDAMY RKCVIDLDIANGKFVAKARFLAEAGWRALLGAKERDDEDEGSPLPVVAKGDELLCEKGEL MERQTQPPRPFTDATLLSAMTGIARFVQDKELKKILRATDGLGTEATRAGIIELLFRRTF LYKKGRYIHSSEAGRALIHCLPEIAARPDMTADWEATLTQISEKTRRYQDFMQPLVGTLY QLIEQARSNRNPQAFRGLPPAAEKSAKRKYKPKAKENKA >gi|316919538|gb|ADCU01000008.1| GENE 99 105996 - 107129 932 377 aa, chain - ## HITS:1 COG:STM0513 KEGG:ns NR:ns ## COG: STM0513 COG2603 # Protein_GI_number: 16763893 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Salmonella typhimurium LT2 # 9 370 1 363 364 442 59.0 1e-124 MVLLSNSRVSSRADSADYHRILVDDVPLIDVRAPVEFQQGAFPSAQNLPLMLDSEREAVG ICYKQHGQDAAIKLGNELVYGAVRDARIAAWHEQCKRHPQGYIYCFRGGLRSHIVQQWLH ESGVDYPLIEGGYKALRTYAIQATEQASQLPMVLIGGNTGSGKTRMLRELAAGIDLEGVA HHRGSSFGRTLVSQSSQVDFENRLAVDLLKKQDAGIRHWFLEDEGRIIGSNHLPVCFYDR MQKAPVAVVDDPFETRVLRLQEEYIDLMRVEFERVYGREQGWDNYAEYLNHGLFAIRKRL GMERYAKLKQYLEQALTQQRETRNSDGHLAWLVPLLHEYYDPMYRYQLEKKAERIVFRGN YSEVKDYLLATSQTYGD >gi|316919538|gb|ADCU01000008.1| GENE 100 107129 - 108172 969 347 aa, chain - ## HITS:1 COG:YPO2164 KEGG:ns NR:ns ## COG: YPO2164 COG0709 # Protein_GI_number: 16122396 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Yersinia pestis # 1 346 1 346 348 578 81.0 1e-165 MTAPAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDIGNG IGIISTTDFFMPIVDDPFDFGRIAATNAISDIYAMGGKPIMAIAILGWPVDKLAPEIAQK VIEGGRFVCQQAGISLAGGHSIDAPEPIFGLAVTGMVSTDRVKKNSAAQSGCKLYLTKPL GIGVLTTAEKKSKLRPEHQGVATETMCQLNKPGADFADIAGVTAMTDVTGFGLLGHLSEI CHGSDLQATIWFDQVPKLPDVENYINEGCVPGGTGRNFESYGHLVGDMTELQRKLLCDPQ TSGGLLLAVLPEAETQVQEVANRFGLTLSAIGELHVRQPDQPLIEVR >gi|316919538|gb|ADCU01000008.1| GENE 101 108397 - 108945 528 182 aa, chain - ## HITS:1 COG:YPO2163 KEGG:ns NR:ns ## COG: YPO2163 COG0778 # Protein_GI_number: 16122395 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Yersinia pestis # 1 182 1 183 183 241 67.0 5e-64 MDALELLLQRRSASRLAAPAPTGDALEAIYQAGLRAPDHGALQPWRFITVEGEGQERLSS LLHAIALEEQLDEKGIEKAKNAPFRAPLIITVVAHCNTETKVPQWEQVASACCAVMAMQM AAQAQGFNGIWRTGKWTSDAKVREAFGCREQDEIVGFLYLGTPQLKAARVAPLDSSKFVS AF >gi|316919538|gb|ADCU01000008.1| GENE 102 109373 - 109954 421 193 aa, chain + ## HITS:1 COG:YPO2162 KEGG:ns NR:ns ## COG: YPO2162 COG0616 # Protein_GI_number: 16122394 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Yersinia pestis # 1 173 1 173 616 253 75.0 1e-67 MHFLWRCISGVFRWTWRILNFIREFILNVFLILLILVCVGIYFQMQSKPVEPVKGALLVN LTGVVVDNPAISNKFSQLGREILGANSNRLQENSLFDVVDMIRQAKTDPNITGMVLSLND FAGADQPSLQYIGKALREFRDSGKPIFATADSYNQAQYYLASYANKIYLSPQAWSICMGW LLITSITKHCSIS >gi|316919538|gb|ADCU01000008.1| GENE 103 109909 - 111222 1184 437 aa, chain + ## HITS:1 COG:YPO2162 KEGG:ns NR:ns ## COG: YPO2162 COG0616 # Protein_GI_number: 16122394 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Yersinia pestis # 2 437 181 616 616 618 71.0 1e-177 MATNNLYYKTLLDKLKVSTHIFRVGTYKSAVEPMIRDDMSPAARDADNQWLSGMWNNYLT TVAANRQITTEQLFPGAEGILKGLQAVGGDTAKYALSNKLVDALASRSEVENLFTKAFGW NKSTKDFSAISMYDYTPPAAKQSGSEIAVIFADGAIMDGEATPGNVGGDTTANQIRDARL NPKIKAIVLRVNSPGGSVSASEVIRSELAAARAAGKPVVVSMGGLAASGGYWISTPADYI VASPSTLTGSIGIFGVINTFENTLDSIGVHTDGVATSPLADLTVTKPLPEAFSQMMQINI ENGYNNFINLVAKARNKTPEQVDAIAQGRVWLGSDAKKNGLVDQLGDFDDAVSKAAELAK LKTYQLNWFVEDPSFGQMLLGQFTGSVQAALPSAVRAMLPESLVRISALLKDKTDWMSTL NDPQNRYALCMSCGDVK >gi|316919538|gb|ADCU01000008.1| GENE 104 111397 - 112413 932 338 aa, chain + ## HITS:1 COG:YPO2161 KEGG:ns NR:ns ## COG: YPO2161 COG0252 # Protein_GI_number: 16122393 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Yersinia pestis # 1 337 1 337 338 577 85.0 1e-164 MQKKSIYVAYTGGTIGMQRSENGYIPVSGHLQRQLALMPEFHRPEMPDFTIHAYEPLIDS SDMTPEDWQHIADDIAANYDNYDGFVILHGTDTMAFTASALSFMLENLAKPVIVTGSQIP LAELRSDGQTNLLNALYLAANYPINEVSLFFNNKLFRGNRTTKAHADGFDAFASPNYPML LEAGINIRRIAPLMNQLHSEPLKVHQITPQPIGVVTIYPGISADVVRNFLRQPVKALILR SYGVGNAPQKADLLAELQEASDRGIVVVNLTQCISGRVNMEGYATGNALAHAGVISGFDM TVEAALTKLHYLLCQNLTPEQIREQMKQDLRGELSVTD >gi|316919538|gb|ADCU01000008.1| GENE 105 112450 - 113085 502 211 aa, chain + ## HITS:1 COG:YPO2160 KEGG:ns NR:ns ## COG: YPO2160 COG1335 # Protein_GI_number: 16122392 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Yersinia pestis # 1 206 1 206 215 251 60.0 6e-67 MSAALLLIDLQNDFCPRGALAVSEGDRVMPIALKAIDIAQHHGIPIIATQDWHPAHHGSF ASQSGGNIGEVGELAGLAQVWWPDHCVQGSVGAQFHPSLDSNAFDHVVQKGTDKSIDSYS AFFDNGQKASTELHQWLQHHQIDKLYVMGLATDYCVKFSVLDALRLGYQVVVIIDGCRGV NIHPDDSSAALQEMREHGAVLSRLDEIAFCV >gi|316919538|gb|ADCU01000008.1| GENE 106 113157 - 113432 300 91 aa, chain - ## HITS:1 COG:YPO2159 KEGG:ns NR:ns ## COG: YPO2159 COG3139 # Protein_GI_number: 16122391 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 90 1 90 90 119 72.0 1e-27 MELDDLLAAMTPEIYQRLMTAVELGKWPDGVSLTPEQKENSLQMVMLWQSRHNTDAQHMS INTQGQIEMKSKQDFKKGFERDAIILLKPEA >gi|316919538|gb|ADCU01000008.1| GENE 107 113507 - 113920 299 137 aa, chain - ## HITS:1 COG:STM1291 KEGG:ns NR:ns ## COG: STM1291 COG0229 # Protein_GI_number: 16764642 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Salmonella typhimurium LT2 # 1 137 11 147 147 211 70.0 4e-55 MAKDDFSTQHPNDLTEMQRYVTQQRGTEPPFSGKLLHNKQDGIYHCLCCNSPLFYSNSKY DSGCGWPSFYQPVSADAIRYLEDNSHGMQRTEIRCAHCDAHLGHVFPDGPQPTGERYCVN SASLSFTDEDSGEKTQG >gi|316919538|gb|ADCU01000008.1| GENE 108 114403 - 115398 995 331 aa, chain + ## HITS:1 COG:YPO2157 KEGG:ns NR:ns ## COG: YPO2157 COG0057 # Protein_GI_number: 16122389 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Yersinia pestis # 1 331 4 334 334 617 95.0 1e-176 MTIKVGINGFGRIGRIVFRAAQERSDIEIVAINDLLDAEYMAYMLKYDSTHGRFNGTVEV KDGHLVVNGKTIRVTAERDPANLKWNEVNVDVVAEATGLFLTDETARKHIAAGAKKVVLT GPSKDNTPMFVMGVNDKTYAGQDIVSNASCTTNCLAPLAKVLNDKFGIVEALMTTVHATT ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSV VDLTARLEKPASYKDICAAMKAASENELKGILGYTEDDVVSTDFNGEVCTSVFDAKAGIA LNDNFVKLVSWYDNETGYSNKVLDLIAHISK >gi|316919538|gb|ADCU01000008.1| GENE 109 115481 - 116368 813 295 aa, chain + ## HITS:1 COG:YPO2156 KEGG:ns NR:ns ## COG: YPO2156 COG0676 # Protein_GI_number: 16122388 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzymes related to aldose 1-epimerase # Organism: Yersinia pestis # 6 291 1 287 291 427 68.0 1e-119 MSQQNLSEKIFSLPVQEQITPYISQRQIDELPVVVVNHPKVRAAVTLQGAHLLTWQPSGE KPVLWLSSESAFKNGVAIRGGIPICWPWFGPAGQPAHGFARNLPWTLTAHDEEENGVILT FTLEQSPESKKYWPHDFCLIARYKLGAECEMELESHGEYDYAAALHTYFNIGDIMRVDVS GLGTPYIDKVNSGTGEQQGNLTFATRTDRIYTAPEPFSVITDKALQRVIEVHHHNNTDVV AWNPWSELSVSMADMPNDGYKTMVCVETAHVTSPLKASVDNPTRLSVTLRTHALR >gi|316919538|gb|ADCU01000008.1| GENE 110 116450 - 117193 700 247 aa, chain - ## HITS:1 COG:YPO2155 KEGG:ns NR:ns ## COG: YPO2155 COG3713 # Protein_GI_number: 16122387 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein V # Organism: Yersinia pestis # 1 247 11 255 256 321 64.0 8e-88 MKTLKLTTLGLLVLAATSAAQAGTWSLGASALVSPDPYRGNNDRVYPVPIINYEGDDFYF RSLTAGYYLWKDEQNQLSVMAFYNPLHFKASDSDDRHMKQLSNRHSTVMAGVSYTHKEDW GSIRTSFAGDILDNSNGLIADAAYLFPITAGAWSFTPGAGVTWNSANQNDYYFGVSGSES NRSGYKRYTADDSWNPYVELTARYQINSSWNAFFTGRYIRLSDEVKDSPMIDKSYSGLLW TGVTYTF >gi|316919538|gb|ADCU01000008.1| GENE 111 117665 - 119599 1747 644 aa, chain + ## HITS:1 COG:YPO2153 KEGG:ns NR:ns ## COG: YPO2153 COG2766 # Protein_GI_number: 16122386 # Func_class: T Signal transduction mechanisms # Function: Putative Ser protein kinase # Organism: Yersinia pestis # 1 644 1 644 644 1246 95.0 0 MNIFDHYRQRYEAAKDEEFTLQDFLTICRQDRSAYANAAERLLMAIGEPAMIDTALESRM SRLFSNRVIARYPAFEEFYGMEEAIEQIVAYLKHAAQGLEEKKQILYLLGPVGGGKSSLA ERLKALMQRVPIYVLSANGERSPVNDHPLCLFNPQEDANILNKEYGIPPRYLGTIMSPWA AKRLHDFGGDITKFKVVKVWPSILEQIAIAKTEPGDENNQDISALVGKVDIRKLENHAQN DPDAYGYSGALCRANQGMMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIIL AHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRVSEEMKIYDKLLNNSELDHAPCAPGT LETLARFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLS TRFAFKILSRVFNFDHAEVAANPVHLFYVLEQQVEREQFPQDVAEKYLEHLKGYLIPKYV EFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPETGQLFDRESLNAELEKI EKPAGISNPKDFRNEIVNFVLRARASHNGHNPNWTSYEKLRTVIEKKMFSNTEELLPVIS FNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS >gi|316919538|gb|ADCU01000008.1| GENE 112 119705 - 120982 945 425 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739530|ref|ZP_02146940.1| 50S ribosomal protein L34 [Phaeobacter gallaeciensis BS107] # 1 418 1 433 445 368 44 1e-100 MAYFIDRRLNGKNKSMVNRQRFLRRYKSQIKHSIADAINKRSVTDVESGESVSIPNEDIS EPMFHQGRGGERHRVHPGNDHFVQNDRIERPQGGGGGGGSGQGEASKDGEGEDEFVFQIS KDEYLDLLFEDLALPNLRKNQYKQLTEYKTHRSGFTSNGVPANISVVRSLQNSLARRTAM TAGKRRELHELENVLEQLRHSEPAQLLEEERIRKEIADLRQRIDRVPFIDTFDLRYKNYE RRPEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVDVVYIRHHTQAKE VDEQEFFYSQETGGTIVSSALKLMDEIVRERYNSAEWNVYAAQASDGDNWADDSPLCSEL LANKLLPQVRYYSYIEITRRAHQTLWREYEGLQQRFENFAMQHIREPDDIYPVFRELFQA QVNKN >gi|316919538|gb|ADCU01000008.1| GENE 113 121142 - 122917 1294 591 aa, chain + ## HITS:1 COG:RSc0456 KEGG:ns NR:ns ## COG: RSc0456 COG4178 # Protein_GI_number: 17545175 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Ralstonia solanacearum # 6 577 24 600 614 576 52.0 1e-164 MQQPLHRTTHWSEVWQLIKPYWVSEEKVSAWTRLIAIIALTLAGVYINVLFNEWNRVFYD ALQNRNYAVFKAQLIRFSYLAVIFIIIAIYRIYLTQGLQMLWRRWMTEKYMSKWLSHQAY YHTEIQQTIDNPDQRISQDLNALTNGTLSLSLGLLSSLVTLFSFVAILWSVSGSISFMLS DHEFVIPGYMVWFALLYAGMGSVLIWWIGRPLVGLSFDQERFEANFRFGLIRIRDNADPI ALYHGEQQEKNQLSGQFENIRSNWWSIMRLTKRLNVASTFYDQFANIFPILVASPRYFSN AIQLGTLMQVASAFGQVQGALSWFIGAFTDLASWKACVNRLAGFNAAISAIEQQPNNISR TITTDSDDSLIARDLSLCLYQGRELFSHVNLHARRGDKILITGPSGCGKSTLLRAIAGVW PYGQGEISQPDSDKKSVLFLPQRSYLPIGTLRDALCYPRGSQGVSDEELQQVLKACRLHH LHQALDIRANWTHQLSPGEQQRLSFARALVIKPDVLYLDEATSALDEETEQRVYQLLNQR LPDTTLISVAHRSSVAPFHNIRWKFVKQADATQEEAYYSAPSVIEISSLAH >gi|316919538|gb|ADCU01000008.1| GENE 114 122977 - 124092 1140 371 aa, chain - ## HITS:1 COG:YPO1205 KEGG:ns NR:ns ## COG: YPO1205 COG3203 # Protein_GI_number: 16121496 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Yersinia pestis # 5 371 1 371 371 482 70.0 1e-136 MDEKMKKSALAMMMTLAVASLATPVLHAAEVYNKDGNKLDMYGRVKAEHYLSDNQSVDGD QSYVRFGFKGVTQINDTLQGFGQWEYQIAANRAESDGATGTKTRLGFAGLRFSEFGSFDY GRNYGALYDVEAWTDMLPEFGGDSYTKADNFMTGRSTGVATYRNRDFFGLVDGLNFALQY QGKNENDRDITKQNGDGYSLSTTYEIVDGISIGAAYASSDRTQDQQNLAFGHGDKADAWT GGLKYDANNVYLAAMYAETRNMTPISGTAEINGVNTNVKGLANKTQNVEVIAQYQFDFGL RPSLGYIQSKGKDIEGVGDADLVKYIDVAATYYFNKNMSAFVDYKINQLNDNNPLNLKTD DVVALGLVYQF >gi|316919538|gb|ADCU01000008.1| GENE 115 124576 - 124830 328 84 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_1634 NR:ns ## KEGG: NT01EI_1634 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 14 72 20 78 85 63 57.0 2e-09 MNTLLIDDVAQSLFRSEVSKIIGEAVSDLVGAEGDIVYGKLINSLAHSADQETSIERKTL LLSAIDRLIGDENLLRRKRLVESK >gi|316919538|gb|ADCU01000008.1| GENE 116 124843 - 125082 233 79 aa, chain - ## HITS:1 COG:STM1152 KEGG:ns NR:ns ## COG: STM1152 COG5645 # Protein_GI_number: 16764508 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Salmonella typhimurium LT2 # 6 79 1 75 75 104 64.0 3e-23 MTALWLKYLLLMVCVASLSGCGSIISRTVGKGHGYQYYPGVQWDLRDSPWRYVTALDVPF SLIADTFMLPFDAKHGPYD >gi|316919538|gb|ADCU01000008.1| GENE 117 125418 - 125633 324 71 aa, chain + ## HITS:1 COG:no KEGG:ETAE_1475 NR:ns ## KEGG: ETAE_1475 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 71 1 71 71 98 71.0 7e-20 MSDPHHIAEWARLRETSIEIAHAIFELAKNDEVLAQKIWDEGSDEVLPLAFSKTDKDELF WGEETIFRANV >gi|316919538|gb|ADCU01000008.1| GENE 118 125698 - 126267 366 189 aa, chain + ## HITS:1 COG:no KEGG:Spro_2743 NR:ns ## KEGG: Spro_2743 # Name: not_defined # Def: endodeoxyribonuclease # Organism: S.proteamaculans # Pathway: not_defined # 1 178 1 178 186 272 71.0 6e-72 MHHLMLDIETLDTTPSAVILSIAAVFFEPLTGELGETFAAQISPQKPQPNRTISADTVAW WAQQSDAARKEAFSGTETLKKTLTQFSRFIHINSSDKIHVWGNGKEFDCSILEHAYQQLE MVCPWDFWRTQDVRTLVTLARTLGFDPKKTRAFEGVPHLPLDDACHQARYVSDIFRSLRV IPSALESHH >gi|316919538|gb|ADCU01000008.1| GENE 119 126321 - 127520 923 399 aa, chain + ## HITS:1 COG:YPO2148 KEGG:ns NR:ns ## COG: YPO2148 COG0477 # Protein_GI_number: 16122381 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 18 373 18 373 400 416 69.0 1e-116 MRNYILLLLSLVLFGPLGIDLFLPTIPAIAADFQVKNEVIQSTISLFLLVMGLGQLIAGP LVDKFGRRPIALIGIALYILGSTVAALSNSSDIFVLARVIQGCAVCCTGVVCFSGVRDRL NGNEAAKAFGFLNGTLNIVPALAPLLGGILAELFNWRAPFWFLVFYAVVVFVIIAIWLPE TRPADTKPVKGLPLKQYARILSNSRFLRFALVNAGAMGMAITYVSFAPTVLMTDGKLSPL VFSLIFGGNGFWILFVSLIANKVIQRAGRPFCLMLGTLLMALGCIGLFVGMHLLPVDASQ HWLSYMLPVASACAGLAFIMGPATSYALEPYSDEAGIASALVGFVQMAIGSCIALVAIAL PMAAKPALALVMLLGAVLALSARLLSSKLKGRVKSVHQA >gi|316919538|gb|ADCU01000008.1| GENE 120 127595 - 128665 623 356 aa, chain - ## HITS:1 COG:ZdadX KEGG:ns NR:ns ## COG: ZdadX COG0787 # Protein_GI_number: 15801412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Escherichia coli O157:H7 EDL933 # 1 356 1 356 356 449 59.0 1e-126 MPRPIRATIDLSALTHNLDQIRQQTPEAKIWSVVKANAYGHGLSRIWRALAKTDGFALLD IEEAILLREQGWQGPILLLEGFFQPQDLQLIDRYRLTTTIHNESQLQILGRARLSAPVDI YLKVNTGMHRLGFMPEQLMAIYHSARALPNVDHITLMTHFANADNHLGVESPLAAFNAAA VDISAPRCLANSAATLWHQPTHADWVRPGIVLYGASPTGRWHDIAESHLRPVMSLRSEII AIQNIQSGDSVGYGSRYQAVQPQRIGIVACGYADGYPRHALSGTPVWVSGQRTQLLGTVS MDMLAIDLTALPEVQVGESVELWGQNLPVDDVAQSAGTIGYELLCAVAPRVPVTVL >gi|316919538|gb|ADCU01000008.1| GENE 121 128811 - 130115 1100 434 aa, chain - ## HITS:1 COG:ECs1684 KEGG:ns NR:ns ## COG: ECs1684 COG0665 # Protein_GI_number: 15830938 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 707 78.0 0 MRIIVLGSGVVGVASAWYLARAGHEVMVLDRQDGPALETSAANAGQISPGYAAPWAAPGV PLKAIKWMFQRHAPLAIRLDGTTDQLRWMWQMLRNCDSSHYALNKSRMVRLSEYSRDCLK ALRAETNIHYEGRQKGTLQLFRTAQQFENAARDIDVLKDAGVPYRLMEATELGSVEPALA QVQHKLTGGLQLPNDETGDCQLFTQQLATMAQREGVEFRFNTPVDRLLKQGNQIAGVQCG NDVITGDAYVVAFGSYSTALLHDMLAIPVYPLKGYSLTIPITRPDGAPVSTVLDETYKIA ITRFDQRIRVGGMAEIVGFNTHLLDARRKTLEMVVRDLYPNGGNIEQAKFWTGLRPMTPD GTPMVGKTPIKNLYLNTGHGTLGWTMACGSGQLLADIISGVTPAIPSEDLSVARYDKSFR QQSGRSLSDIHTAH >gi|316919538|gb|ADCU01000008.1| GENE 122 130827 - 132362 986 511 aa, chain + ## HITS:1 COG:STM1804 KEGG:ns NR:ns ## COG: STM1804 COG2719 # Protein_GI_number: 16765145 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 10 511 9 510 510 895 86.0 0 MTISTRKQAREAATLSDGPDWTFPLLQEYLDQIDRVAKHYRLDTYPHQIEVITAEQMMDA YSSVGMPINYTHWSFGKKFIETEQLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALV MAHACYGHNSFFKNNYLFRSWTDASSIVDYLLFARHYISECEERYGVDEVERLLDSCHAL MNYGVDRYKRPQKISMEEEIARQKSREAYLQSQVNDLWKTLPRREREEQAVEAVRFPSEP QENILYFLEKNAPLLEPWQREIVRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYD ENLVSDRFMLEFLHSHTNVVYQPAYNSPYYSGINPYALGFAMFQDIKRICQNPTEEDRHW FPAIAGSDWLETLHFAMRDFKDESFISQFLSPKLMRDFRLFTVLDDDRNNYLEIDAIHNE EGYRRIREQLSAQYNLSNHEPNIQVWNVALRGDRSLTLRYVPHNRAPLDKGRREVLKHLH RLWGFDVYLEQVNEEGNVELLERCPSRPNPL >gi|316919538|gb|ADCU01000008.1| GENE 123 132456 - 133175 664 239 aa, chain - ## HITS:1 COG:YPO2144 KEGG:ns NR:ns ## COG: YPO2144 COG2186 # Protein_GI_number: 16122378 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 239 1 239 239 440 87.0 1e-123 MVIKAQSPAGFAEEYIIESIWNNRFAPGSILPAERELSELIGVTRTTLREVLQRLARDGW LTIQHGKPTKVNNFWETSGLNILETLARLDHDSVPQLIDNLLSVRTNIASIFIRTAVRQH PDKVQEILAQAETVEDHAEAFTDLDYGIFRGLAFASGNPIYGLILNGLKGLYTRVGRYYF SNPDARKLALSFYAKLSQLCHEQNYEKVMEYVRNYGKDSGAIWHSMQGSIPSDLAEGRR >gi|316919538|gb|ADCU01000008.1| GENE 124 133474 - 133761 214 95 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDLAGILISASCVLTTSALLVTVYGGSGMPRFFRKPQPKSEPQYQQSVEASALEDGKSPD VGDLNISLPAMSAVGDLNIALPVAQTVIGDIREAY >gi|316919538|gb|ADCU01000008.1| GENE 125 134008 - 134250 151 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVYWFLLQLLVQHAQKAKAAVKVKIWKGYGAEVVDKNGWVTINGSPATIEETNDKATVYS AAPFMVIIYKMGKVSLMKER >gi|316919538|gb|ADCU01000008.1| GENE 126 134625 - 135038 342 137 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSTKSTLIIGALVVVVGCVSFVKGREAGNDARDRYHLNQDLSGSLAMKCESLIADKPRN NFVYIDFGKQTVYYNGDELFKYTSFTVFASSRGVSYSLLDTHAKFASITQLGNYARVSLQ DGDHTINYMDCETQDEQ >gi|316919538|gb|ADCU01000008.1| GENE 127 135192 - 135857 857 221 aa, chain - ## HITS:1 COG:YPO2232 KEGG:ns NR:ns ## COG: YPO2232 COG0176 # Protein_GI_number: 16122461 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Yersinia pestis # 1 220 1 220 221 332 76.0 3e-91 MELYLDTADVIAVKRLARVLPLQGVTTNPSIIAKEGKSLWEVLPALRDALGGTGKLFAQV IANDSERMVTEAVMMTERVSGVIVKIPTTAEGLAAIKKLNTMNIATLGTAVYGAGQGLLA AMAGAAYVAPYVNRVDAQGGDGIGMVRELHQLLKMHAPDSRVLAASFKTPRQALDCMLAG CEAITLPIDIAEQMLLSPAVQSAVEKFEQDWQGAFGTNVLG >gi|316919538|gb|ADCU01000008.1| GENE 128 136014 - 136913 749 299 aa, chain + ## HITS:1 COG:ybiY KEGG:ns NR:ns ## COG: ybiY COG1180 # Protein_GI_number: 16128792 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli K12 # 1 299 10 308 308 405 67.0 1e-113 MLFNLQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRSRKRQVLFDARLCIKGCQLCEQ CAPHAILHGDSGIAINREALSEADLDRLQECCPTGALSVCGSTLDLEEVMAIVLRDAPFY QRTGGGLTLSGGEPFMQPEACSELLRRCHEHLIHTAVESCLHVPWHNIEPSLEYLDLLLA DLKHVNAETFKLWTDGSAKRVMDNFRRLAQRGVNMTIRVPLIPDFNADEASIRAITDFAA EELGVKDIHFLPYHTLGINKYRLLDMPYLAADKPLDNPELLDFAQQYARDKGLTALLRG >gi|316919538|gb|ADCU01000008.1| GENE 129 136918 - 139350 1902 810 aa, chain + ## HITS:1 COG:STM0843 KEGG:ns NR:ns ## COG: STM0843 COG1882 # Protein_GI_number: 16764205 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Salmonella typhimurium LT2 # 1 810 1 810 810 1464 84.0 0 MTQLDLTTLSPRIRAHKETLIHIGKPPVCTERAQHYTAMYQHHQDKPLPVRRALALAHHL QQRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEQEIDELADRPGAGFSVSAENKAVL HKICPWWRGQTVQDRCYGIFTDEQKALLATGIIKAEGNMTSGDAHLAVNFPLLLEKGLDG LREKVDERRGRLQLTDWDDLHKEQFLKSIDIALAALSEHILRYAELARKMAKQETRAERQ SELIHIAENCELIAHQPPQTFWQALQLCYFIQLVLQIESNGHSVSFGRLDQYLYPWYRRD VELTQHISREFAIELLQGCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQILLNGQPC DAVNPLSYAVLESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVI PEFIKLGVEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLAALEQGRDATSGK VFLPQERALSKGNFDDFEQVMQAWDEQIRYYTRKSIEIECVVDTVLEENAHDIICSALVD DCIERGKSVKQGGAKYDWVSGLQVGIANLGNSLAAVRKLVFEQGAIGQQQLAAALENDFD GLDGELLRQRLMNHAPKYGNDVDDVDNLLVRAYQTYIEELKQYHNTRYGRGPIGGTYYAG TSSISANVPFGAATQATPDGRKANTPLAEGASPASGTDHLGPTAVFNSLAKLPTQAILGG VLLNQKLNPATLEAPRDREKLMLMLRTFFEVHRGWHVQYNIVSRETLLEAKAHPEHYRDL VVRVAGYSAFFTALSPDAQDDIIARTEHTL >gi|316919538|gb|ADCU01000008.1| GENE 130 139424 - 140185 616 253 aa, chain + ## HITS:1 COG:STM1704 KEGG:ns NR:ns ## COG: STM1704 COG1349 # Protein_GI_number: 16765048 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 246 1 246 250 328 66.0 8e-90 MNSRQQAILQYVNDLRRVSVADLSRNTGVSEVTIRQDLNLLEKRNYLKRIHGYAVAFESD DVDARMMINFTLKQKLAAYAASLVNDGETIFIENGSTNALLARYLAERKRVTLITVSTYI AHLLKETECEVILMGGLYQKGSETMVGPLTRQCIQQVYFSKAFLGIDGYHPETGFTGRDM MRADVANTVLAKGVENIILTDSSKFGQIHPNPLQPLKAISRVITDYRLADGYKNHLKQQN ILVDTVDEDQAML >gi|316919538|gb|ADCU01000008.1| GENE 131 140182 - 140427 231 81 aa, chain + ## HITS:1 COG:YPO2231 KEGG:ns NR:ns ## COG: YPO2231 COG5460 # Protein_GI_number: 16122460 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 80 1 80 82 87 51.0 7e-18 MSEITFSRDQTAHMVDKLQKYLQRELDVEIGDFDAEFLLDFFAKELGAHFYNQGMADALR VVEEKTESLVDTLTWLQKPID >gi|316919538|gb|ADCU01000008.1| GENE 132 140467 - 141180 491 237 aa, chain - ## HITS:1 COG:STM4249 KEGG:ns NR:ns ## COG: STM4249 COG3700 # Protein_GI_number: 16767499 # Func_class: R General function prediction only # Function: Acid phosphatase (class B) # Organism: Salmonella typhimurium LT2 # 1 237 1 237 237 355 70.0 3e-98 MRKITLALSAIALVIGLNHSVQAKISTDTPLNAGVTVAQLAHQMPIHWVSVEQIENSLQG IPAMAVGFDIDDTVLFSSPGFYRGQKEYSPQDQSYLKNPEFWEKMNNGWDSFSMPKQVGK DLIAMHLKRGDSIYFITGRSPTKTETVTETLRDDFSIPAASMNSVIFAGDLPGQNTKVNW IKDKKIKIYYGDSDGDINAARDVGIRGIRVLRASNSSYQPLPKAGALGEEVIVNSEY >gi|316919538|gb|ADCU01000008.1| GENE 133 141497 - 141763 292 88 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_2339 NR:ns ## KEGG: NT01EI_2339 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 7 82 1 76 82 112 65.0 4e-24 MNAEATMRIELTLDKRNKLPEGALEALNHEFSKRVNHIYPDTAVQVRMTNSNTLTVMGGL KADKERIEEVLQETWESADDWFDNGFSE >gi|316919538|gb|ADCU01000008.1| GENE 134 141962 - 142981 478 339 aa, chain - ## HITS:1 COG:ECs2034 KEGG:ns NR:ns ## COG: ECs2034 COG1275 # Protein_GI_number: 15831288 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Escherichia coli O157:H7 # 12 332 2 320 330 401 69.0 1e-111 MNSSLHPSTLERAPQVINIPAGYFGMVLGIIGMGFAWRYASTIWPVSPFIGEGLVAVATL IWLSLAFAFVYRLLRYPSLVVAEMRHPLTGSFVSLFPATTMLVSIGLAAYSQTRLLADIL FFVGACVQLCYAAWQSAGLWRGEHPAEATTPGLYLPTVANNFISAMACGALGFHDLGIMF FGAGVFSWLSLEPAILHRMRSHGEMAKPVRTSLGIQLAPALVACSAYLSVNGGHTDFVAK MLFGYGLLQLIFMFRLMPWYLKQPFNASFWSFSFGISALATTALHLSVGEQDGLFSALAV PMFIFTNGVIALLMIKTLILLLQGRLIPRSERPCCKLGE >gi|316919538|gb|ADCU01000008.1| GENE 135 143032 - 143217 63 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNGSPFILQKRKVALFLRVMSFVHPHKSPLSDGIGIKEWSTLNFNMWFRFHTLGHLPEEQ Q >gi|316919538|gb|ADCU01000008.1| GENE 136 143217 - 143504 377 95 aa, chain + ## HITS:1 COG:no KEGG:Spro_1894 NR:ns ## KEGG: Spro_1894 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 7 79 9 81 92 88 67.0 6e-17 MNSDNPEHAMTFGELLELIHDQQRRINVLETAFSYLAFGLEKKSCQLLTHSLKLEANNQT YDEKTQQYFAKLAELFEMRNSGMGDVPSTNSDRVS >gi|316919538|gb|ADCU01000008.1| GENE 137 143670 - 143924 267 84 aa, chain + ## HITS:1 COG:no KEGG:ETAE_2073 NR:ns ## KEGG: ETAE_2073 # Name: bssS # Def: biofilm formation regulatory protein # Organism: E.tarda # Pathway: not_defined # 1 84 1 84 84 128 80.0 6e-29 MNGKDEVIQTHPVVGWDISTVDSYDALMIRLHYLSSRDQDPEKAEVDRTLWLTTDVARQL IDILEAGIEKIESSEYQDIDYLKH >gi|316919538|gb|ADCU01000008.1| GENE 138 144132 - 145244 900 370 aa, chain + ## HITS:1 COG:YPO2448 KEGG:ns NR:ns ## COG: YPO2448 COG0665 # Protein_GI_number: 16122669 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Yersinia pestis # 1 370 1 370 371 496 62.0 1e-140 MKYDLAIIGCGSVGAAAGYYAAMSGLNVLMLDSHTPPHRHGSHHGDTRIIRHAYGEGEKY VPLVLRAQQLWEKLEDVSAVQLFHRSGVLNIGPATSEFMRNVENSATHYQLNVEKMNASQ LQQRWPEWSVPDDYIGILESNAGYLKSELAVGLLNEKAAEAGATLHFNCPVTAITPEQDG VKISTAEGEFSAARAAVTAGTWAKTLLPELPMTPVRKVFSWYKADGRYSENNKFPAFTVE TPDGDQFYGFPFNNDGLKLGKHNGGQPLSGPEQRRPFGSNPQDGSEVFGFLRRFLPGVGV CLHGEVCTYDVSPDEDFIIDTLPDAPQISVVTGLSGHGFKFATVLGEVIALQAAGKPVPY DLSAFKLNRF >gi|316919538|gb|ADCU01000008.1| GENE 139 145510 - 146046 61 178 aa, chain + ## HITS:1 COG:YPO2449 KEGG:ns NR:ns ## COG: YPO2449 COG2771 # Protein_GI_number: 16122670 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Yersinia pestis # 16 167 46 203 204 126 43.0 3e-29 MNSVIDASEQNDMPDPDVILVNLTDYCRINGQNSTLLHFFSQFSSAKIFIYIDTEYPNSA RPVILDSHVYIINKQNLIPLLVTLSDLHLKPNLQKTLQQYFGDYPVLTERESSIIQYWME EMPNYKIARRLNICSRTVYVHKQHITEKMHVRNRLEFCYLYNVIKYVIFPAPARITTA >gi|316919538|gb|ADCU01000008.1| GENE 140 146156 - 147583 1277 475 aa, chain - ## HITS:1 COG:ECs5093 KEGG:ns NR:ns ## COG: ECs5093 COG0477 # Protein_GI_number: 15834347 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 451 10 463 500 479 51.0 1e-135 MTVDDITIVDRSMLKRAVGAAALGNAMEWFDFGVYSFLAVTIGKVFFPSGSPAAQLIATF AAFAAAFLVRPLGGMVFGPLGDRIGRQKVLAFTMIMMAVGTFCIGLIPSYESIGIAAPIL LLVARLVQGFSTGGEYGGAATFIAEYSTDKRRGFMGSWLEFGTFGGYLLGAMLVTGLTAA MPEETLLAWGWRIPFFIAAPLGLFGLYIRLKLEETPAFQKHMEKQEAIEESKPKMGLFEM MGTYWQQMLKCIGLVLLFNVSNYMLTSYMPSYLTGVLGLSELSGLMLIMVVMFIMMPLTL LWGHWNDRLGRKPVIMFGALGLIVLAIPSLMLIGTGSMWAVFAGLMILGVLHTCFSGTMP SALPALFTTQTRYSALAVGFNISVSLFGGTTPLITSWLVSTTGNHLVPAYYLMGAGVIGA ITVMFMRETARKPLRGSAPAVATKAEAKALIHKLRLRRQRKEHDLVLQNNQSTVN >gi|316919538|gb|ADCU01000008.1| GENE 141 148453 - 149499 873 348 aa, chain - ## HITS:1 COG:YPO2450 KEGG:ns NR:ns ## COG: YPO2450 COG0628 # Protein_GI_number: 16122671 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Yersinia pestis # 1 341 1 341 352 352 61.0 4e-97 MSRTVLSAQGTRIAIMASALVIILAGVRAASEIIVPFLLALFLAIILNPLVKILMKLRLP RSAAVGLVLVIIILGLTLMIGMLGASLNDFSRTLPQYRGMLASKLVALQHIAERLNLNFS PVELANHFDPGVVMNMATRIVTQLSGAMSSLFLLLMTVVFMLMEVPHLPYKLRKSLSNAD AGMGSIQRALDGVTQYLALKTGISLITGVVVWLMLHLMGIRFAMMWGVLAFVLNYIPNIG SVIAAIPPVIQALLFNSFGDAVMVASGYIAINMVFGNILEPRVMGRGLGLSTLVVFLSLI FWGWLLGPIGMLLSVPLTIVVKILLELTPVGSRFAVLLGEGIDERKAS >gi|316919538|gb|ADCU01000008.1| GENE 142 149786 - 151258 1003 490 aa, chain + ## HITS:1 COG:alr4738 KEGG:ns NR:ns ## COG: alr4738 COG1167 # Protein_GI_number: 17232230 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Nostoc sp. PCC 7120 # 2 482 3 488 490 257 32.0 3e-68 MLSFNLDRHDSLSLQKQIYQQIHTALHNGVLTNGERLPSIRELGEKLQVSRNTITAVYEK LVLEGFIASRPGVGYNVIRSSRVELPEIKTPQSDLDHPPSVLQTQAPDTYVDVDSPMFFS LGNPDESSFPWQRWRSWNNKASRSKHLLMTRYHPPAGLMSLRQELVKYLANARGIHTDPD HIIITNGVQEGLALVARTLLTPQEHIAVESPCYSGAWNLFSSCTPHRHAIPVDDFGLQTE RLPNQQCALAYVTPSHQYPVGGTLPLERRKTLLEWSRRSNAYVIEDDYDTTFLYGTQPLP ALKSLENANNVIYLSSFSKTLGPGMRIGFMVCPERLVEPILNLKALWNHGASWLYQQFLA DFMHDQGYHRHLRKLEIEYGARQKLLCEGLMTLFPQAKLLGISSGLHITLKTALSADTVS QLRERCLHEGVRFDTLGSMCNGSENAYLAENQDTLMLFGFSALSQGHIRLALEIIGKACR ELGISSSGKA >gi|316919538|gb|ADCU01000008.1| GENE 143 151263 - 152312 609 349 aa, chain - ## HITS:1 COG:yceA KEGG:ns NR:ns ## COG: yceA COG1054 # Protein_GI_number: 16129018 # Func_class: R General function prediction only # Function: Predicted sulfurtransferase # Organism: Escherichia coli K12 # 1 338 1 338 350 569 76.0 1e-162 MPVLHNQISNQELKARMLAEAEPRTTVSFYKYCRIDDPQCFRDALYITFRELSVFGRIYI AQEGINAQISVPASRYESMKAALYQAHPDFDGLRMNVALDDDGKSFWVLRMKVRERIVAD GIDDPSFDAANVGQYLNAAEVNTMLDDPDAVFVDMRNHYEYEVGHFTHAMEVPSDTFREQ LPMAVDMLQQDKDKKIVMYCTGGIRCEKASAYMRHNGFNNVYHVEGGIIEYTRRAREQGL PLKFIGKNFVFDERMGERITDDVISHCHQCGTPCDTHTNCLNDGCHLLFIQCPVCAEKYS GCCSPECQEESVLPIEEQRARRAGRENGNMIFNKSRHKPLRLRIPNRDE >gi|316919538|gb|ADCU01000008.1| GENE 144 152530 - 153090 505 186 aa, chain - ## HITS:1 COG:ydcN KEGG:ns NR:ns ## COG: ydcN COG1396 # Protein_GI_number: 16129393 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 178 1 177 178 159 44.0 3e-39 MTDLSLHIGQTLRDLRQQRGWSLDKTAQATGVSKAMLGQIERGESSPTVVTLWRISSGLQ ASFSEFLPKQLTDAEPASLHHEDEAITAQTLLGYDAQLGYEVLLITLQAGYTHNSYAHDK GVVEDILMIEGEVEVQVEGTWHSVTVSKPLRFCAEQTHSYRNRGSAVAKFHNIVHYSQPT KMQREV >gi|316919538|gb|ADCU01000008.1| GENE 145 153232 - 154206 662 324 aa, chain + ## HITS:1 COG:no KEGG:BcerKBAB4_2729 NR:ns ## KEGG: BcerKBAB4_2729 # Name: not_defined # Def: hypothetical protein # Organism: B.weihenstephanensis # Pathway: not_defined # 1 299 1 298 312 303 54.0 5e-81 MQAIVYGVIASLFFAFTFILNRAMEIGGGDWMWSASLRFWFMAPMLFVLVALRGQLRQSL RHLSQNIGTYLLWSTLGFGLFYALITLASTYGPGWLVAGTWQFTIIAGSLLVPWLGVKGE PRHKIPWYGLRWSLLILLGIALMLWQQAEHISVFQAVAGLVPVLVAAFLYPLGNRKMMNI CHHNVDTLQRVLNMTLASLPFWLLLSLVAYQRVGWPSTTQVEQSVLVALFSGVIGTLLFF AATNIVRNDPTQLAAVEATQSGEVLFTLLGEMIFLGATLPAPISLLGITLVILGMIAHSL ASTRGSGKTRVRRKTANQKIEEHT >gi|316919538|gb|ADCU01000008.1| GENE 146 154147 - 155043 514 298 aa, chain - ## HITS:1 COG:YPO0799 KEGG:ns NR:ns ## COG: YPO0799 COG0583 # Protein_GI_number: 16121111 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 297 1 297 302 298 51.0 1e-80 MDRLSAMRVFVCVVEQGSLSRAAEKLNLSRAMVSRYLADLEKWIGGRLLHRTTRSQSLTS AGEEVLARCKALLLLSDEIEQIVDNNQQIPRGLLRITSSQSLIQAFLTDAVCDYLTSNPP AQIDICRQEKTLNLVDERIDLAIRITNQLDSNLIARRLGTCYSVMCASPNYAERHPLPQK IEQLSKHNCLTHEHYSHHQWGFTYHGNSVVVPVSGNLSANCATVLTSATLRGFGISLLPR YLVNQLLEDGQLLEVLPDYQPETLGIYGVYTSRQFMPTTLRVFLDFLVSRFASDPRFA >gi|316919538|gb|ADCU01000008.1| GENE 147 155172 - 156050 911 292 aa, chain + ## HITS:1 COG:PA0057 KEGG:ns NR:ns ## COG: PA0057 COG0491 # Protein_GI_number: 15595255 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Pseudomonas aeruginosa # 21 292 23 294 295 325 56.0 9e-89 MQPIIAVKPLVLSLILAGAAFATQAKPLEISVYNPGATSLFPVSSELITGDKEAVLIDAQ FEKKDANALINMIKKSGKTLTTIYISHGDPDFYFGLDTLLAAYPQAKVVATQPTVAHIKT TQQAKLQYWGPLMKDQAPAKIITPEVLPGNEIVLEGQKLIIKDLDSASPDRTYVWIPSLK AIVGGVLVSANQHIWTADTQTKASRENWIMALDRMQALHPETVVPGHYLGTAPKGDAAIV FSRDYLKKFEQVLSTNKNSQAVINEMKKAYPTLKDTESLDLSAKVNTGEMKW >gi|316919538|gb|ADCU01000008.1| GENE 148 156325 - 156759 536 144 aa, chain + ## HITS:1 COG:no KEGG:YE1611 NR:ns ## KEGG: YE1611 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 144 1 144 144 211 78.0 8e-54 MITSLNQSFTRLTDHQDGGKLLLRLTFGLLMLFHGVAKIEHGIGWISTMLQEQGLPGFIA YGVFIGEIVTPILIILGLFTRPAALIYAINLLVATLMVGTGKFFTLTDVGAWGLENEMLY FMGGIVVMLLGSGRYSIMRNEALR >gi|316919538|gb|ADCU01000008.1| GENE 149 157303 - 158823 1537 506 aa, chain + ## HITS:1 COG:lin0564 KEGG:ns NR:ns ## COG: lin0564 COG3104 # Protein_GI_number: 16799639 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Listeria innocua # 6 453 2 443 492 282 38.0 1e-75 MQSSDNTQQGRTFLGHPYPLGSLFFTEMWERFSFYGIRPLLILFMAASVFEGGMGIPREQ ASAIVGIFAGSMYLAALPGGWLADNWLGQRRAVWYGSILIALGHLAIALSALWGNTLFFI GLLLIVLGTGLFKTCISVMVGTLYKDGDSRRDGGFSLFYMGINLGSFLAPLVTGLLVGEK GWHWGFGIGGLGMLVALLIFRFFAVPSMRRYDREVGLDSSWNHAVVERKNVGRWISLLAV GAIVLIGLLSYGIIPINPVLIASVMVYVIAASVTLYFVYLFAFAGLASEERVRLLVCFIL LVSAAFFWSAFEQKPTSFNLFANDYTQRQFGDFEIPTVWFQSLNALFIIILAPLFSWLWP ALGRRKMQPSSMVKFVIGILFAAAGFGIMILAAQDVLATSEAVSPFWLVGSILLLTLGEL CLSPIGLATMTLLAPDRMRGQVMGLWFCASSLGNLAAGLIGGQVKADQLDMLPDLFARCS IALVICAVVLALLIKPMRRMMQNAEI >gi|316919538|gb|ADCU01000008.1| GENE 150 159188 - 159853 436 221 aa, chain + ## HITS:1 COG:YPO0680 KEGG:ns NR:ns ## COG: YPO0680 COG0586 # Protein_GI_number: 16121003 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Yersinia pestis # 1 219 1 219 220 273 68.0 2e-73 MEVIKEILHALWAQDFTVLSDPKMIWAIYGILFTTLLLENGLLPAAFLPGDSLLLLAGAL IAKGVLPFFPTISVLIIASSLGCWMSYIQGRWLGDTKLVQGWLVQLPAHYHQRAYHMFHK HGLVALLVGRFLAFVRTILPTIAGLSGLKNARFQVFNWLSALLWVCSVTGVGLAISYIPF VKRHEDQVMTCLMILPIILLISGLVGTIVMVVRRKRQTTAQ >gi|316919538|gb|ADCU01000008.1| GENE 151 159932 - 160579 448 215 aa, chain - ## HITS:1 COG:mll3417 KEGG:ns NR:ns ## COG: mll3417 COG3531 # Protein_GI_number: 13472957 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted protein-disulfide isomerase # Organism: Mesorhizobium loti # 5 209 9 213 216 160 42.0 2e-39 MKTRELVYLFDPLCGWCYGASPRISQLIDDPDFHVTFRPTGLFAREGARELTPEFAQYAW QNDMRIESATGQVFSEDYRENVLNQGGVFDSFSATLALIAAELSEPERVFAVLKTLQRAR YVEGLDNSSSKGVVEILEREGFETEALAVSRPTEALLRRYEHCLRDTQRLLDRHNVKGVP ALVVVGAQGERLLPSGKLFTSYEELKAELLRFEEL >gi|316919538|gb|ADCU01000008.1| GENE 152 160750 - 162027 1023 425 aa, chain - ## HITS:1 COG:AGc1839 KEGG:ns NR:ns ## COG: AGc1839 COG2814 # Protein_GI_number: 15888343 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 34 402 50 418 428 387 65.0 1e-107 MNGDTNIFLISGADMSTSSLPPTPSPVAHRRGAEIALAVGGFGIGTGEFAIMGLLPNVAK DLAISIPQAGHVISIYALGVVIGAPVIATLAARLSRRTLLLLLMVLFAVGNIASALSSSY GNLMVFRFISGLPHGAYFGVASLVAASMAGVGQRAKAVGRVMLGLTLATLLGSPLATWIG QLMGWRAAFVMVGVIGALTALLVMLWLPKDRVEEGASPLRELGALKRKQVWLTLGIAAVG SGGLFAVFSYIAPTLIHQTGMSPSSVPLVLIIFGVGMILGNIFGSRLADRSLMGTIVGVL IWNVVILTTFYWVADIAWATVLVVLLTGGSFALVPALQTRLMDVAEDAQTLAAALNHSAF NIANALGAWLGGVSIAAGFGWSSTGWVGAGLAAGGILLFLWSYYSDPDIKPKKSRRNKSI RSIEL >gi|316919538|gb|ADCU01000008.1| GENE 153 162289 - 163137 521 282 aa, chain + ## HITS:1 COG:AGc3514 KEGG:ns NR:ns ## COG: AGc3514 COG3739 # Protein_GI_number: 15889216 # Func_class: S Function unknown # Function: Uncharacterized integral membrane protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 282 20 298 298 368 67.0 1e-102 MSPFSLLDQHLLRQRNAPELTGIRRFCTEFWYFGLKEARACLFVGLFFIAVFSVPRAGFL HIARYALLFIIAIFIQLWMVASKLETWDELKAITLFHMVGFALEVFKTSGSIQSWSYPDF AYTKLFGVPLFAGFMYASVGSFIIQSWRLFDLKVRHHPPYFYSTCVAILIYINFFTHHYI GDYRWYITAFILGIYARSTVIFTPYDRERKMPLLLAFILIGFFIWLAENISTFFGIWKYP NQLGAWSAVHVGKWSSWALLVIMTFTITTFLKNIKRRIHIAQ >gi|316919538|gb|ADCU01000008.1| GENE 154 163216 - 164553 1409 445 aa, chain - ## HITS:1 COG:STM3541 KEGG:ns NR:ns ## COG: STM3541 COG2610 # Protein_GI_number: 16766827 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Salmonella typhimurium LT2 # 1 445 1 445 446 538 74.0 1e-153 MDTMTLVGTAVGSVLLLLFLVMKARLHAFVALMLVSIGAGIFSGMPLSKITQAMQDGMGG TLGFLTIVVALGAMFGKILHETGALDQIAAHLLKSFGEKRAHYALGIAGLVCALPLFFDV AIVLLIGVVFAVARRTNGNVVKMAIPLFAGVASAAAFLLPGPVPMLLAAQMNADFGWMIA IGLVAAILGMLLAGPLFGNFISKHVSWPMPEEENAPVLDKSNMPSFGLSLILVLCPLVLV GMKTIGARFVTPNTSLYDWLEFIGHPFTAILIACLIVIYGLAKPRGMSKEQIMSICSAAI QPAGIILLMTGAGGVFKQILVDSGVGPALGDALIGAGLPIAVACFVLSAAVRVIQGSATV ACLTTVGLVLPVTAQLGLNGGQLAALAICIAGGSIVLSHVNDAGFWLFGKFTGANELQTL KTWTVMETILGTVGGIVGMMAFTLF >gi|316919538|gb|ADCU01000008.1| GENE 155 164558 - 165094 424 178 aa, chain - ## HITS:1 COG:STM3542 KEGG:ns NR:ns ## COG: STM3542 COG3265 # Protein_GI_number: 16766828 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Salmonella typhimurium LT2 # 1 175 1 175 177 257 70.0 8e-69 MKNTLKPHHVYVVMGVSGSGKSAVASAVAQKLSCGFLDGDFLHPRSNINKMSEGHALNDE DRAPWLSALNDAAFAMQRTNDVSVIVCSALKKRYRDRLREGNANLSFIYMDGDFDLIESR MKARKGHFFKPQMLVSQFEALEVPNADEQDVCAIDINQPLDAVIADTLKHIQQRSIQE >gi|316919538|gb|ADCU01000008.1| GENE 156 165458 - 166153 504 231 aa, chain - ## HITS:1 COG:STM3677 KEGG:ns NR:ns ## COG: STM3677 COG0235 # Protein_GI_number: 16766962 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Salmonella typhimurium LT2 # 1 231 1 231 231 367 77.0 1e-102 MLEQLKQQVLAANLALPKYGLVTFTWGNVSGVDRASGLMVIKPSGVDYEGMGIDDMVVVD IVSGEVVEGKWKPSSDTETHRGLYLAFPHIGGIVHTHSRHATIWSQAGLDIPAWGTTHAD YYYGNIPCTRLMTESEIQHDYEWKTGQVIIETFQQSHLDPDQMPAVLVHSHGPFAWGKDA LDAVHNAVVLEEVAYMAIFTRQLSPQLSDMQQELLDKHYLRKHGANAYYGQ >gi|316919538|gb|ADCU01000008.1| GENE 157 166524 - 166742 339 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|194433800|ref|ZP_03066074.1| ## NR: gi|194433800|ref|ZP_03066074.1| osmotically inducible lipoprotein B [Shigella dysenteriae 1012] # 1 72 1 72 72 66 80.0 6e-10 MNTTMKRFAAAALAVTLVASLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSALGTVGGA AVGGIIGHQVGK >gi|316919538|gb|ADCU01000008.1| GENE 158 166817 - 167143 356 108 aa, chain - ## HITS:1 COG:yciH KEGG:ns NR:ns ## COG: yciH COG0023 # Protein_GI_number: 16129243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 1 (eIF-1/SUI1) and related proteins # Organism: Escherichia coli K12 # 1 108 2 109 109 152 86.0 1e-37 MQDKNSRLVYSTDTGRIDEEKVPVVRPKGDGIVRIQRQTSGRKGKGVSLITGLDIDDAEL QKLAAELKKKCGCGGAVKEGVIEIQGDKRDLLKQLLEAKGHKVKLAGG >gi|316919538|gb|ADCU01000008.1| GENE 159 167156 - 167881 630 241 aa, chain - ## HITS:1 COG:ECs1854 KEGG:ns NR:ns ## COG: ECs1854 COG0284 # Protein_GI_number: 15831108 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Escherichia coli O157:H7 # 1 240 1 241 245 348 76.0 5e-96 MSISTPSQANATSSPILVALDYADKNAALAFVDNIDPLDCRLKVGKEMFTLYGPQLVSEL QQRGFEIFLDLKFHDIPNTAAHAVAAAAELGVWMVNVHASGGARMMSAAREALVPFGKDA PLLIAVTVLTSMEAEDLRGIGIEQSPADYAERLAKLTKACGLDGVVCSAHEATRLKNSCG KDFKLVTPGIRPEGSAAGDQRRIMTPVEAVQAGVDYMVIGRPITQSATPAETLRSILNSL A >gi|316919538|gb|ADCU01000008.1| GENE 160 167982 - 169151 935 389 aa, chain - ## HITS:1 COG:YPO2225 KEGG:ns NR:ns ## COG: YPO2225 COG2956 # Protein_GI_number: 16122454 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosaminyl transferase # Organism: Yersinia pestis # 1 389 1 389 389 632 83.0 0 MLELLFLLLPVAAAYGWYMGRRSAQQDKQQEASRLSREYVAGVNFLLSNQQDKAVDLFLD MLKEDSNTVEAHLTLGNLFRSRGEVDRAIRIHQALMESASLTFDQRLLAVQQLGRDYMAA GLYDRAEEMFNQLVDEQDFKVSALQQLLIIYQATSDWQKAIDVAEKLVKQGKDQQRIEIA HFYCELSLQAMGSDDLERGMALLKKAASADKNCARVSVMLGRIYIAKDEPAKAVEALSQV LDQDKDLVSEVLPMMHDCYQQLNQPEQWVAFLRRCVEENTGAAAELMLAEVLEQNEGIEA AQVYVGRQLQRHPTMRTFYRLMDYHLAEAEEGRAKESLQLLRDMVGEQIRTKPRYRCMKC GFTAHTMYWHCPSCRAWATIKPIRGLDGQ >gi|316919538|gb|ADCU01000008.1| GENE 161 169157 - 169462 198 101 aa, chain - ## HITS:1 COG:ECs1852 KEGG:ns NR:ns ## COG: ECs1852 COG3771 # Protein_GI_number: 15831106 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 88 1 88 102 132 75.0 1e-31 MKYLLIFLIILAVFVLSVTLGAHNDQTVAFNYLIAQGEYRLSTLLATLFAGGFILGWIIC GLFYIRVRLGLVRAERKIRRLEQQAAPAEPDNLAPPATLKE >gi|316919538|gb|ADCU01000008.1| GENE 162 169716 - 170480 552 254 aa, chain - ## HITS:1 COG:ECs1851 KEGG:ns NR:ns ## COG: ECs1851 COG0671 # Protein_GI_number: 15831105 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 # 1 253 1 253 254 293 60.0 3e-79 MLQIAKRTTVGLIVLLAMPVTVWMSGWHWQPGGTDYILKALFAMTETVTSPWGALTSIVL AGWFLWCLRFRIKATVILFIILTITVVVGQQIKSTIKNWVQEPRPYVMWLEGEHNVDVKA FYSLKRGARGDLVTEQLQNETRIPQWLKGHWAFETGFAFPSGHTMFVATWALLAFGLLLP RRRYISTLVISIWAISVMGSRLVLGMHWPQDLIVATLISWALVTISCALVQRFCGSLDIS APEYQEIKQRTEDE >gi|316919538|gb|ADCU01000008.1| GENE 163 170768 - 171355 376 195 aa, chain + ## HITS:1 COG:ECs1850 KEGG:ns NR:ns ## COG: ECs1850 COG0807 # Protein_GI_number: 15831104 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Escherichia coli O157:H7 # 1 195 1 195 196 370 91.0 1e-103 MQLKRVAEAKLPTPWGDFLMVGFEEIATGHDHLALVYGDVSGATPVLSRVHSECLTGDAL FSLRCDCGFQLEAALEHIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDKGADTVEANHQ LGFAADERDFTLCADMFKLLGVDQVRLLTNNPKKVEILTEAGINITERVPLIVGRNPKNE RYLSTKAAKMGHLLD >gi|316919538|gb|ADCU01000008.1| GENE 164 171434 - 172867 1282 477 aa, chain - ## HITS:1 COG:YPO1608_1 KEGG:ns NR:ns ## COG: YPO1608_1 COG1263 # Protein_GI_number: 16121876 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Yersinia pestis # 1 402 1 402 402 676 87.0 0 MFKNAFANLQKVGKSLMLPVSVLPVAGILLGIGSANFTWLPAVVSHVMAEAGGSVFANMP LIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVIAPLVLHIPAAEIAEKHLADTGVLG GIIAGSIAAYMFNRFYRIKLPDYLGFFAGKRFVPIISGLTAIAFGIALAFIWPPVGSAIQ WFSQWAAYQNPKVAFGIYGLVERALVPFGLHHIWNVPFQFQVGSFTDAAGQVFHGDIPRY IAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPI EFSFMFVAPILYAIHAILAGLAFPICIMLGMRDGTTFSPGLIDFILQSGHSSKIWLFPIV GIAYGLVYYVIFRVLITKLNLKTPGREDSSSEQKAQSSDEMSAALVAAFGGKDNITNLDA CITRLRVSVADVAKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTDMDEYMRNH >gi|316919538|gb|ADCU01000008.1| GENE 165 173194 - 173982 810 262 aa, chain - ## HITS:1 COG:YPO1607 KEGG:ns NR:ns ## COG: YPO1607 COG0084 # Protein_GI_number: 16121875 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Yersinia pestis # 1 254 1 254 269 421 79.0 1e-118 MYLVDSHCHLDGLDYENLHKSVDSVLADAKARDVGFVLAVATTLPGYLAMRKQIGQRDNV AFSCGVHPLNLDGGYDYAELRQLASAPDVVAMGETGLDYFYQKDNIPLQQESFRQHIRIG RELHKPVIVHTRDARQDTLDILREEQVHECGGVLHCFTEDQDTARQLLDMGFYISFSGIV TFRNADALREVARYVPIDRMLVETDSPYLAPVPHRGKENQPAYVRDVAEYLAVLKGMTPE ALAQQTTDNFVSLFGVALPQRG >gi|316919538|gb|ADCU01000008.1| GENE 166 174032 - 175018 716 328 aa, chain - ## HITS:1 COG:YPO1606 KEGG:ns NR:ns ## COG: YPO1606 COG0470 # Protein_GI_number: 16121874 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Yersinia pestis # 1 324 1 329 340 383 62.0 1e-106 MNWYPWLSAPYRQLVGQHQAGRGHHALLVHAIAGCGDDSLMYALGRWLMCQRPNGDKSCG ECHSCRLMLAGNHPDWYHLQPEKGKSSLGIEPVRQIIEQLYAHAQQGGAKVVLLPLAETL TEAAANALLKTLEEPPEKTYFLLGTREPANLLATLRSRCFYLHLPVPDEALSLRWLHTQQ PGDETAMRTALRLNGGAPVAALALLEPTIWKQRLQLCQGLQQAIPQRQWMQLLPLLNHEN VDHRLTWLCALLLDAIKLQQGVTTALMNLDQQPLVHQLASTQATLVLQQQLEQWIFCRHQ LLTTVGLNRELMLTRQLCLWSESFPPAV >gi|316919538|gb|ADCU01000008.1| GENE 167 175015 - 175656 669 213 aa, chain - ## HITS:1 COG:YPO1605 KEGG:ns NR:ns ## COG: YPO1605 COG0125 # Protein_GI_number: 16121873 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Yersinia pestis # 1 210 1 210 212 325 81.0 5e-89 MESKFIVIEGLEGAGKTTARDTVVDVLRQQGIQDIVFTREPGGTPLAEKLRDLVKQGVEN EKLTDKAEVLMLYAARVQLVDNVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDSRLMQS LRDTVLGDFKPDLTLYLDLPPAIGLERARSRGALDRIEKESLAFFERTRTRYLELAAQDA SIITVDASQTLPEVTAAIRLALESWFKQQEHGE >gi|316919538|gb|ADCU01000008.1| GENE 168 175646 - 176671 750 341 aa, chain - ## HITS:1 COG:YPO1604 KEGG:ns NR:ns ## COG: YPO1604 COG1559 # Protein_GI_number: 16121872 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Yersinia pestis # 1 339 1 339 341 473 69.0 1e-133 MKKKLFGLLVVCMLILLATLFWGYYQVQKFARTPLAISQETLFKLPAGTGRVALEGLLVR DKLMTHSYYFPWLLQIEPELANFKAGTYRITPGMTVRQFLELLKSGKEAQFTVRFIEGTR LQDWMQVLAASPSLKQNVANKSEAEIAKMLGLPEGRSLEGWLYPDTYHYTAGNSDEMLLK RAYSRMNKEVDEIWQGREKNLPYKTPEELVTMASIIEKETGVGEERGKVASVFINRLRIG MRLQTDPTVIYGLGNAYNGNLTRRDLLQPTAYNTYVISGLPPTPIAMPSRASLEAAAHPY KTSYLYFVADGKGGHVFTTNLQSHNQAVRDYLQVLREKNGK >gi|316919538|gb|ADCU01000008.1| GENE 169 176690 - 177502 389 270 aa, chain - ## HITS:1 COG:ECs1474 KEGG:ns NR:ns ## COG: ECs1474 COG0115 # Protein_GI_number: 15830728 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Escherichia coli O157:H7 # 1 268 1 268 269 274 49.0 1e-73 MFWLNGKPAETIPLDDRGLHYGDGCFTTARCVQGKIDHLEAHLNRMQTACEQLLIGNVNW TVWRDEFLFVARSAGDGFVKAIITRGSGGRGYSIAGADQPRRIFTNGPLPPQYSQWQQNG ISLAISPIRLGINTTLAGIKHLNRLEQVLIKASLEQTDAHEALVLDTKDRLVECCAANLF WRKGKQVYTPSLEYAGVNGLMRQRIMALLADSVYELAVVSEPMQTLQDADEVFVCNSLMP LLPVNEVGEYHFHSRQLANYLLPGCLSPVA >gi|316919538|gb|ADCU01000008.1| GENE 170 177644 - 178885 1189 413 aa, chain - ## HITS:1 COG:YPO1601 KEGG:ns NR:ns ## COG: YPO1601 COG0304 # Protein_GI_number: 16121869 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Yersinia pestis # 1 413 1 413 413 669 87.0 0 MSKRRVVVTGLGMLSPVGNTVDSTWDAIVAGQSGISLIDHFDTSAYATRFAGLVKDFNSE DYISRKDARKMDAFIQYGIAAGIQAFKDSGIEVTEENAPRIGAAIGSGIGGLGLIEENHG ALVKGGPRKISPFFVPSTIVNMVAGHLTIMLGLRGPSISIATACTSGVHNIGHAARMIAY NDADVMLAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKDRDGFVLGDGAGILV LEEYEHAKARGAKIYAEIVGFGMSSDAYHMTSPPENGEGAALAMVNALRDAGLNASQVGY INAHGTSTPAGDKAEAQAVKSVYGADAGKVMVSSTKSMTGHLLGAAGAVESIFTILTLRD QIVAPTINLDNPDEGCDLDFVPGAARQVKGLEYALCNSFGFGGTNGSVIFRKI >gi|316919538|gb|ADCU01000008.1| GENE 171 178975 - 179211 414 78 aa, chain - ## HITS:1 COG:VC2020 KEGG:ns NR:ns ## COG: VC2020 COG0236 # Protein_GI_number: 15642022 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Vibrio cholerae # 1 75 33 107 110 93 86.0 1e-19 MSTIEERVKKIIIEQLGVKEDEVVNAASFVDDLGADSLDTVELVMALEEEFDTEIPDEEA EKITTVQAAIDYIESANK >gi|316919538|gb|ADCU01000008.1| GENE 172 179366 - 180100 243 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 243 4 242 242 98 31 3e-19 MSFEGKIALVTGASRGIGRAIAESLVARGARVIGTATSDKGAADISAYLGENGKGYNLNV VDQASIDAVLSAIRAEFGEIDILVNNAGITRDNLLMRMKDDEWQDILDTNLTSVFRLSKA VLRAMMKKRCGRIITIGSVVGTMGNAGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA PGFIETDMTRALTDEQRAGILSQVPANRLGDAKEIANAVAFLASDEAGYITGETLHVNGG MYMI >gi|316919538|gb|ADCU01000008.1| GENE 173 180114 - 181043 1027 309 aa, chain - ## HITS:1 COG:YPO1598 KEGG:ns NR:ns ## COG: YPO1598 COG0331 # Protein_GI_number: 16121866 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Yersinia pestis # 1 307 1 307 309 452 82.0 1e-127 MSKFAMVFPGQGSQTVGMLADLATQFPIVEQTFAEASDALGYDLWKLVQEGPAEELNKTW QTQPALLAASVAIYRVWQQQNGAQPAMMAGHSLGEYSALVCAGVLDFKQAIRLVELRGKL MQEAVPAGTGAMSAIIGLDNDAIAKACEESAQGEVVSPVNFNSPGQVVIAGNKDAVERAG AACKAAGAKRALPLPVSVPSHCALMKPAAEKLAVALQEVTFNAPKFAVINNVDVKTETSP EAIRDALVRQLYSPVRWSESVEFMAGEGVEHLLEVGPGKVLTGLTKRIVDTMTAAAINDA ASVSAALAQ >gi|316919538|gb|ADCU01000008.1| GENE 174 181148 - 182098 844 316 aa, chain - ## HITS:1 COG:STM1193 KEGG:ns NR:ns ## COG: STM1193 COG0332 # Protein_GI_number: 16764548 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Salmonella typhimurium LT2 # 1 316 1 317 317 528 83.0 1e-150 MYTRILGTGSYLPVQVRTNADLERMVETSDEWIVSRTGIRERRIAAPDENVSTMAFEAAK HALEMSGLDKDEIGLIVVATTSATHAFPSAACQVQNMLGIKGCAAFDVAAACAGFTYALS IADQYVKNGAVKHALVIGSDTLSRTLDPQDRGTVILFGDGAGAVVLGASDEAGILSTHIH ADGRYGELLTLPNRQRYTDDQAYLTMAGNEVFKVAVTELAHIVDESLAANNLERSDLDWL VPHQANLRIISATAKKLGMTLDNVVVTLDRHGNTSAASVPCALDEAVRDGRIQRGQLILL EAFGGGFTWGSALVRF >gi|316919538|gb|ADCU01000008.1| GENE 175 182105 - 183109 638 334 aa, chain - ## HITS:1 COG:YPO1596 KEGG:ns NR:ns ## COG: YPO1596 COG0416 # Protein_GI_number: 16121864 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Yersinia pestis # 1 334 11 344 344 528 81.0 1e-150 MSGDFGPCITVPAALQALASTSSLYLLIVGQPDAIAPYLAKADPSLQERLRVVPAESVIS NDAKPSHAIRTSKGTSMRVALDLVKNGEAQAVVSAGNTGALMGLAKMMLKPLDGIERPAL MTVLPNQQKSKTVVLDLGANVESSSAMLVQFAVMGAVMAEELVGVATPRVALLNIGEEEC KGLDNIREAAAVLKSTPAINYIGYLEGNDLLTGKTDVLVCDGFVGNVTLKTMEGVVRMFL SLLKSPGEKRRRSWWLKLLGRWIQKRIAKRFGDLNPDQYNGACLVGLRGTVIKSHGAANQ KAFAVAIEQAVQAVQRQIPQRIALRLEAILPKSD >gi|316919538|gb|ADCU01000008.1| GENE 176 183167 - 183337 281 56 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238920264|ref|YP_002933779.1| ribosomal protein L32, putative [Edwardsiella ictaluri 93-146] # 1 56 1 56 56 112 96 1e-23 MAVQQNKKTRSCRGMRRSHDALTTTTVSVDKVSGETHLRHHVTADGFYRGRKVIVK >gi|316919538|gb|ADCU01000008.1| GENE 177 183354 - 183875 370 173 aa, chain - ## HITS:1 COG:YPO1594 KEGG:ns NR:ns ## COG: YPO1594 COG1399 # Protein_GI_number: 16121862 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Yersinia pestis # 1 172 1 172 174 265 86.0 3e-71 MQKVKLPLTLDAVRTAQKRLDYVGFYSSEQVTRVAESVVSVDSDVAVSLSFNIDNQRLAV ITGHADVTVTLCCQRCNQTFQQQVHTTYCFSPVANDEQAEALPEAYEPIEVNEFGEVDLL AMVEDEIILALPVVPVHESEHCEVSEADMVFGKLPPEAEKPNPFAALASLKRK >gi|316919538|gb|ADCU01000008.1| GENE 178 183999 - 184616 481 205 aa, chain + ## HITS:1 COG:yceF KEGG:ns NR:ns ## COG: yceF COG0424 # Protein_GI_number: 16129050 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Escherichia coli K12 # 2 199 9 206 207 241 61.0 5e-64 MLYGKNMSPLILASTSPYRRALLEKLGVEFICAAPDTDETPKDGESATDLVQRLALEKAL SLTNKFPNNFIIGSDQVCVIDGNIVGKPGSVENAQRQLRAASGKMITFYTGLCVVNSHTM HREMICETFHVHFRHLSDEEIRAYIELEMPLSCAGSFMCEGAGILLFSRLEGRDPNALIG LPLIALNEMLLKSGYNALLHSKNKA >gi|316919538|gb|ADCU01000008.1| GENE 179 184664 - 185620 195 318 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 63 301 57 279 285 79 29 1e-13 MNMNNTSVKLVTIAADEAGQRIDNFLRNQLKGVPKSMIYRIVRKGEVRVNKKRIKPEYKL QSGDEVRIPPVRIAERDEAPVSAKLDKVAALNDCIIFEDDYLLVLNKPSGTAVHGGSGLS FGVIEGLRALRPEARFLELVHRLDRETSGVLLVAKKRSALRALHEQLRMKGMQKDYLALV RGQWQSHCKVVQAPLLKNILQSGERIVRVNAEGKPSETRFKVEERFENATLVKASPVTGR THQIRVHTLHAGHPIAFDDRYGDREFDSELKGTGLDRLFLHAAALRFEHPNTGETMRVEA PLDKKLRHCLDVLRKTKA >gi|316919538|gb|ADCU01000008.1| GENE 180 186240 - 189641 3086 1133 aa, chain + ## HITS:1 COG:YPO1590 KEGG:ns NR:ns ## COG: YPO1590 COG1530 # Protein_GI_number: 16121858 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Yersinia pestis # 1 1133 1 1221 1221 1022 61.0 0 MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY GAERHGFLPLKEIAREYFPSNYSSHGRPNIKDVLREGQEVIVQVDKEERGNKGAALTTFI SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALSSLQLPDGMGLIVRTAGVGKSAEAL QWDLSFRLKHWDAIKKAAEGRPAPFLIHQESNVIVRAFRDYLRPDIGEILIDNPKILDLA KQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVE NRLRDAVRQDRARIQIGRISRFGLLEMSRQRLSPSLGESSHHVCPRCNGTGTVRDNESLS LSILRLIEEEALKENTNEVHAIVPVPVASYLLNEKRESVSAIEKRQDGVKVIVVPNDQMQ TPHYSVVRVRKGEETSTLSYLLPQLHEAESLTAEEEPVLERKRPEQPALAPFSLDVEAPP AETAAPATVTPATKAVAKPAEPAQPGLVSRFFSALKNMFAGSESEQKPAAEPAAPVEEPR RQNQDRRNNNRRQNGRRDRNDRNDRNNDRNSDRPERSNDRNNDRSNDRNERNSNREDQRR NRRQPAQAVNTDVNVDAAPTEQRDEQQPRREPRNNDRQRRRTEDKRQAQQEVKALENNDV VAATEAEESNREENQHMPRRQRRQLTQKVRFTTQAEDDAAALAKASVPAVVVTPTVAEAA PTVQADAPQQQASEEESFRDNRQGENGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPM PLAFAAASPEMASGKVWISYPVAPTATTEVEAHASTTEQHQTETHVSPVAENVVEHRVEQ PAVVETVVAAPVVKPVIIPAVVTSVVATSVAAAPAASLTTDTVAAEPVTEVKPAEPSIDA VEVASNAPVVEETAAEETVVEQSVTEETAEAVAPVVAETPAESVSEELATAESTAIDAAE VPVLAETQPETAAVETPATETVETRATEDAVVEAPVQPAVATPAKPVIVVAAKAQRVATA PMTKAPAPEYVPSTPAVSTWQRPALDLQSKGGAGGHAAVSQATAPATKPPAVD >gi|316919538|gb|ADCU01000008.1| GENE 181 189945 - 190235 341 96 aa, chain - ## HITS:1 COG:YPO1588 KEGG:ns NR:ns ## COG: YPO1588 COG1359 # Protein_GI_number: 16121856 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 3 96 2 95 95 94 52.0 4e-20 MSEIRIVATLIAKPEHTATIHRAVERVVDPSRQEVGNIQYDLHEEIGHKGTYVFFEVWAS QEAVDHHNNTVHFQNFVKEIEGKLEMLDIKVLHQIA >gi|316919538|gb|ADCU01000008.1| GENE 182 190505 - 191548 852 347 aa, chain + ## HITS:1 COG:YPO1587 KEGG:ns NR:ns ## COG: YPO1587 COG0418 # Protein_GI_number: 16121855 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase # Organism: Yersinia pestis # 1 347 1 347 348 543 74.0 1e-154 MTVMQHALKIRRPDDWHLHLRDDEMLKTVLPHTSQHFARAIVMPNLVPPITSVAQAQAYR ARILAAVPEEHDFTPLMTCYLTDDLDANELISGHAEGVFTAAKLYPANATTNSKHGVTSV PGLYPLFEKMQKVGMPLLIHGEVTLHDVDIFDREARFIDEVMLPLRKNFPELKIVFEHIT TQEAAEFVTEGDSFLAATITPQHLMFNRNHMLVGGIRPHLFCLPILKRSTHQQALRKAAT SGNSRFFLGTDSAPHSRHRKESSCGCAGVFNAPTAVQAYATVFEEENALQHLEAFCSLNG PAFYNLPVNESYIELVRTPVTVAESISCGDDTLIPFLAGETVQWTVK >gi|316919538|gb|ADCU01000008.1| GENE 183 191617 - 192279 247 220 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 5 197 2 200 223 99 33 1e-19 MSNTENLLELRNICFSVDQQIIIDNLSLTLQPNEFKVITGPSGCGKSTLLKIIASLFPPS SGDIFLHEKNIITIKPEEYRQKVSYCFQTPVLFGETVSDNLRFPYQIRGDKVDNEKIKKG LLQFDLPLHILDKKIDELSGGEKQRVALLRNLQYQPEILLLDEITSALDDKNKEIVHQVI DDLIKSSGIAVLWVTHNSDEIRQSHNLLRMEKHEAKGEEQ >gi|316919538|gb|ADCU01000008.1| GENE 184 192276 - 193034 612 252 aa, chain + ## HITS:1 COG:ECs0554 KEGG:ns NR:ns ## COG: ECs0554 COG0390 # Protein_GI_number: 15829808 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 252 10 261 268 335 77.0 4e-92 MSEHNITDQSLVMALALVAIALLISGKEKLGLEKDIIWSVTRAIIQLIIVGYVLKYIFNI DHALLTLLMVLFICVNAAYNAKKRSKNLSHAFVISLIAIVTGTALTLAVLILSGSITFTP MQVIPISGMIAGNAMVAVGLCYNNLRQRFADEKQKVQEMLSLGATPKQSSAAIIRASIKA ALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIRYQIMVTFMLLSTASLSTIIAGYLA YKKFYSDRSQLL >gi|316919538|gb|ADCU01000008.1| GENE 185 193135 - 194781 495 548 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 57 537 16 488 508 195 31 2e-48 MSNKPFHYQDPFPLKKDETEYYLLSKDHVSVAEFEGQEILKVEPQALTLLAQHAFHDASF MLRPAHQQQVAQILDDPEASENDKYVALQFLRNSEIAAKGILPTCQDTGTAIIVGKKGQR VWTGGGDEAALSRGVYNTFIEDNLRYSQNAALDMYKEVNTGSNLPAQIDLYSTDGDEYKF LCIAKGGGSANKTYLYQETKALLTPGKLKNYLVDKMRTLGTAACPPYHVAFVIGGTSAEA TLKTVKLASTKYYDGLPTEGNEHGQAFRDIELEQELLKEAQNLGLGAQFGGKYFAHDVRV IRLPRHGASCPVGMGVSCSADRNIKAKINRDGIWIEKLESNPGKYIPEHLRKAGEGEAVK VDLNRPMSEILQQLSQYAVSTRLSLSGTIVVGRDIAHAKLKERLDKGEGLPQYVKDHPIY YAGPAKTPAGYASGSLGPTTAGRMDSYVDLLQSHGGSMVMLAKGNRSQQVTDACKKHGGF YLGSIGGPAAVLAQQSIKSLECLEYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQVIQS EQCTRCVK >gi|316919538|gb|ADCU01000008.1| GENE 186 195140 - 196246 963 368 aa, chain - ## HITS:1 COG:STM4108 KEGG:ns NR:ns ## COG: STM4108 COG0371 # Protein_GI_number: 16767374 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Salmonella typhimurium LT2 # 6 365 3 362 367 347 49.0 2e-95 MNKTPRTVTSPKKFVIGRGLLQQMHDYVKDFGDNAFIISDEFILPRVKDEAVTGLQKAGL KGTCEKFNYECTEVEIKRLGALAESQSANVIVGIGGGKTLDSAKAVAYYHKLPVILFPTI ASTDAPCTALAVIYSEEGEFERYLFLPQNPDAVIADTSIIAAAPVRFFAAGVGDALATYF EARACYAADGVNLVLKKPSRTGLGLAQLCYELLSENVDAAMDAVRNKVSTPALEQTIEAT IYLSGVGAEAGGLAAAHAVNNGMSAVPDLHRAQHGEKVVFGLLTQLVLENAPRTELDEVI RIIKVAGLPLTLQDMGLKNFVEAEWRKVAEIACAEGDTMGNMPMELTADDVYEAMVAANA MAERYKNA >gi|316919538|gb|ADCU01000008.1| GENE 187 196628 - 196831 180 67 aa, chain + ## HITS:1 COG:no KEGG:Dd703_3174 NR:ns ## KEGG: Dd703_3174 # Name: not_defined # Def: selenium-binding protein YdfZ # Organism: D.dadantii # Pathway: not_defined # 1 66 1 66 76 63 46.0 2e-09 MQIAYDRNRNPLRVGAHVIENGTRNVMVIKAINDKNLAREKIRAAKCVVCSDSNEYYAPQ DLILLGH >gi|316919538|gb|ADCU01000008.1| GENE 188 196915 - 197598 663 227 aa, chain - ## HITS:1 COG:aqpZ KEGG:ns NR:ns ## COG: aqpZ COG0580 # Protein_GI_number: 16128843 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Escherichia coli K12 # 1 227 5 231 231 307 84.0 1e-83 MSAEFFGTFWLVFGGCGSAILAAGFPELGIGFAGVALAFGLTVLTMAYAVGHISGGHFNP AVTIGLWAGGRFSAKDVVPYVVAQVIGGIAAAAVLYVIASGKAGFDATVSGFASNGYGEH SPGGFTLQSAVVVEMVLSAFFLIVIHGVTDKRAPAGFAPLAIGLALTLIHLISIPVTNTS VNPARSTAVAIFQGTWALQQLWLFWLMPIIGGIIGGLIYRHLLEKKD >gi|316919538|gb|ADCU01000008.1| GENE 189 198593 - 199426 641 277 aa, chain - ## HITS:1 COG:ECs1414 KEGG:ns NR:ns ## COG: ECs1414 COG1462 # Protein_GI_number: 15830668 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in formation of curli polymers # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 444 79.0 1e-125 MRSYLLIISVLLLSGCLTAPPKQAAKPTLMPRAQSYQDLTHLPEPAGKLFVSVYNIQDET GQFKPYPASNFSTAVPQSATAMLVSALKDSGWFIPLERQGLQNLLNERKIIRAAQENGTA AVNNQRQLSSLVAANVLIEGSIIGYESNVKSGGAGARFFGIGASTQYQLDQIAVNLRVVD VNTGQVLSSVNTSKTILSYEVQAGVFRYIDYQRLLEGEIGYTTNEPVMLCVMSAIETGVI YLVNDGITRNLWSLKNPKDVSSPILERYKSTIVPIAS >gi|316919538|gb|ADCU01000008.1| GENE 190 199443 - 199853 289 136 aa, chain - ## HITS:1 COG:no KEGG:CKO_02031 NR:ns ## KEGG: CKO_02031 # Name: not_defined # Def: curli assembly protein CsgF # Organism: C.koseri # Pathway: not_defined # 1 136 1 137 138 143 64.0 2e-33 MRVTYLAFISILISPVSWGGNMVFQFVNPNFGGNPNNGAFLLNEANAQNSYKDPNGYNFD TATPSALDNFTSVIQSQLLGNLMGNISQGKPGRLVTKDFIVDVKNIDGRLTMNILDRTTG KSSTIEVDGLSSVNSN >gi|316919538|gb|ADCU01000008.1| GENE 191 199863 - 200252 230 129 aa, chain - ## HITS:1 COG:no KEGG:ROD_10971 NR:ns ## KEGG: ROD_10971 # Name: csgE # Def: curli production assembly/transport component # Organism: C.rodentium # Pathway: not_defined # 1 129 1 129 129 167 60.0 8e-41 MKKIMFILVIASICSAGKNASAAEIEVPGLITDHTVTSIGHAFYRDFSDNWGKEYPGTLT INERPSARWGSWITIKIEQDTVYQTFLFPNKRSFDKDVAVAIESVNESLSRRSIDKALLN TGDLTADEF >gi|316919538|gb|ADCU01000008.1| GENE 192 200256 - 200903 80 215 aa, chain - ## HITS:1 COG:ECs1417 KEGG:ns NR:ns ## COG: ECs1417 COG2771 # Protein_GI_number: 15830671 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 215 1 216 216 242 58.0 5e-64 MLDEVERKKYLLVLITKPSLQATALLHQLQLTLQVNTKIHNINKDLNDPVDNTLYLFDLM EADRRTTVLWQSELSRCRQRNRILLLNTPDDYQNQDIESWPNISAVFYPSMDERTLTEGI KSVIKGECFFSQGVASYLISQSSHYRYHSPEATGLTQREKEILNKLRAGASNTEIAKLLF ISENTVKTHLYNLFKKISVKNRTQAVSWANDHLRR >gi|316919538|gb|ADCU01000008.1| GENE 193 201738 - 202247 225 169 aa, chain + ## HITS:1 COG:no KEGG:G2583_1300 NR:ns ## KEGG: G2583_1300 # Name: csgB # Def: minor curlin subunit # Organism: E.coli_O55_H7 # Pathway: not_defined # 62 168 53 159 160 65 47.0 5e-10 MKKIVLSAALLVTPYLAVANSDLANADMSTGYSDLNSRYSQSALINQIGSDNRAFTHQQG TNNHSIIVQQGNSNQGRITQSSSNNNALIAQRGSGNSADITQLSSNNNAVIAQLGSGNSD SIIQDSFGNSAYIISFGKNNITQITQTGTNRSAGVVQNASGMAIRVTQH >gi|316919538|gb|ADCU01000008.1| GENE 194 202300 - 202896 348 198 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNKWKIIAASSFVFAMSNAMALTNPAYVFQFTPQTGALGGEVQVYQQGTSNISSVNQDSA VFSKTSVSQSGGLLGGTGNYASVNQNGNVSVVDINQQGNNNAATSSQNGNWSVTEVSQSG LFGNTATTNQSGDFSRTAVVQSGFGLNNAVTSQSGDAAVIVVRQSGASNYANSSQTADFS YSNVNQVGAGNASYVNQN >gi|316919538|gb|ADCU01000008.1| GENE 195 202957 - 203286 158 109 aa, chain + ## HITS:1 COG:no KEGG:SC1093 NR:ns ## KEGG: SC1093 # Name: csgC # Def: putative autoagglutination protein # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 102 1 102 108 71 37.0 1e-11 MHPLLLASVLSNQLWFDTTQEGQYYILKPMAAVTNSCVCNITVDIIRHGLHGESISQQTG TVQLTANRKHALGQMSFSVLQGDWLQVTVVLTDGDNVRLEKQVILPDKV >gi|316919538|gb|ADCU01000008.1| GENE 196 203366 - 204847 1314 493 aa, chain - ## HITS:1 COG:YPO1853 KEGG:ns NR:ns ## COG: YPO1853 COG0591 # Protein_GI_number: 16122104 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Yersinia pestis # 2 493 3 494 494 786 89.0 0 MISTPMLVTFLVYILGMIVIGLVAYRATNNFDDYILGGRSLGSVVTALSAGASDMSGWLL MGLPGAIYLSGISESWIAIGLTVGAYLNWKLVAGRLRVHTEANNNALTLPDYFTSRFEDT SKLLRVISAVVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATILYTFIGGFL AVSWTDTVQASLMIFALILTPVFVILAVGGIDTSMLVIEAKNPANLDMFKGLNLIAIISL MGWGLGYFGQPHILARFMAADSHQTIRKARRISMTWMILCLAGAVAVGFFGIAYFENNPG QAGTVSENGERVFIELAKILFNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKAF FRKKASQRELVWVGRLMVLLVALIAIALAANPENRVLGLVSYAWAGFGAAFGPVVLISVM WSRMTRNGALVGMLIGAITVIVWKQYGWFNLYEIIPGFIFASIAIVVVSLMGRSPSQIIQ TRFANAEAEYKTI >gi|316919538|gb|ADCU01000008.1| GENE 197 205443 - 209417 3580 1324 aa, chain + ## HITS:1 COG:YPO1851_2 KEGG:ns NR:ns ## COG: YPO1851_2 COG4230 # Protein_GI_number: 16122102 # Func_class: C Energy production and conversion # Function: Delta 1-pyrroline-5-carboxylate dehydrogenase # Organism: Yersinia pestis # 529 1324 1 795 795 1163 75.0 0 MGTTTMGVKLDEATRDRIKAAAQQIDRTPHWVIKQAIFNYLERVESGSTLPELPLPVSDT LSSDGDDTVTQPDQPHQPFLDFAEQILPQSVARAAITAAYRRPEHEAVSMLLEQARMAPE LAQSTHQMAYKIAEKLRNQKSANGRAGIVQNLLQEFSLSSQEGVALMCLAEALLRIPDKA TRDALIRDKISNGNWHSHLGRSPSLFVNAATWGLLLTGRLVATHNESKLSSSLNRIIGKG GEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKHEEKGFRYSYDMLGEAALTEADAQR YMISYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYERMMDELYPRLLSLTLL ARSYDIGINIDAEEADRLEISLDLLERLCFEPELAGWNGIGFVIQAYQKRCPAVIDYVID LAQRSHRRLMIRLVKGAYWDSEIKRAQVDGLEGYPVYSRKVYTDVSYLACARKLLAVPSA IYPQFATHNAHTLSAIYHLAGQNYYPGQYEFQCLHGMGEPLYEQVVGKIAEGKFNRPCRI YAPVGTHETLLAYLVRRLLENGANTSFVNRIADNSLPLDELVADPVSAVESMAAKEGAIG LPHPRIPSPRGLYGEERRNSRGLDLSNEQRLASLSSTLLSSASHNWNCAPILEHPASGDQ PSQPVINPAEPRDIVGYVTPASDADIEAALSSAVNAGPIWFSTPPEQRAAVLDRAADLME DQLQSLLGLLAREAGKTFNNAIAEVREAVDFLHYYAQQVRHDFANDTHRPLGPVVCISPW NFPLAIFTGQVAAALAAGNSVLAKPAEQTPLVAAQAVRILLEAGVPSGVLQLLPGEGETV GAKLVGDSRVRGVMFTGSTAVAGILQRNISGRLDPQGRTTPLIAETGGLNAMIVDSSALT EQVVTDVVASAFDSAGQRCSALRILCVQEDIADHTLQMLRGAMAECRMGNPERLSTDIGP VIDAEAKDNIDRHIQAMRAKGHNVYQAAFEHPQDSKEWSEGTFVKPTLIELESFDELEQE VFGPVLHVVRYNRQNLDALIEQINAAGYGLTLGIHTRIDETIAQVTEQAKVGNQYVNRNM VGAVVGVQPFGGEGLSGTGPKAGGPLYVYRLLSSRPDDAVSRTLARQDYEQNVDATLRQP LLAAHQALLTWAQQEKNTALAQRCQEFGDWAQGGTVRLLPGPTGERNTYALLPRERVLCL FDNEQDALIQLAAVLAVGSRVQWIDSEVQRTLYRRLPKAVQQQINVAKSWDAEGVEFDAV IYHGDSDQLRSLCEKIAERPGAIVSVQGFSHGETGILLERLLLERSLSVNTAAAGGNASL MTIG >gi|316919538|gb|ADCU01000008.1| GENE 198 210079 - 210861 287 260 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 18 241 27 256 563 115 32 3e-24 MSTIEVKNLTKSFNGNTVLHGVDLTVEKGEVVAIIGPSGSGKTTLLRSINLLEEPDGGTI QVGDVTIDGGQPLSRQKTAIRKLRQEVGFVFQNFNLFPHRTVLENIIEGPVIVKGEKREV VIARARELLAKVGLKGKEDAFPKRLSGGQQQRVAIARALAMQPEVILFDEPTSALDPELV GEVLSTIRALAEENRTMVIVTHEMSFARDVANRAIFMDEGRIVEQGAAKELFANPQHPRT KLFLEKFLGEKLVDEPLSYI >gi|316919538|gb|ADCU01000008.1| GENE 199 211060 - 211575 302 171 aa, chain - ## HITS:1 COG:no KEGG:YE2518 NR:ns ## KEGG: YE2518 # Name: fliZ # Def: flagella biosynthesis protein FliZ # Organism: Y.enterocolitica # Pathway: not_defined # 1 167 1 167 169 229 64.0 2e-59 MTASQQKRRPLSRYLKDFKHSQCDCSHCGKSLDRMSLVFRGKILDRETLAGMDQLIDDRV WQELEKELTALCRFCSDVYCHCKADYFDILEFKQYLFEQTEMSHSSIREYIVRLRRLDDM LRASDFPDEKFCGSEQQWDLIENMTDANQNNYRIALRKYDQYLSWQKTAVC >gi|316919538|gb|ADCU01000008.1| GENE 200 211614 - 212336 606 240 aa, chain - ## HITS:1 COG:YPO1843 KEGG:ns NR:ns ## COG: YPO1843 COG1191 # Protein_GI_number: 16122094 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Yersinia pestis # 1 236 1 236 240 356 84.0 2e-98 MSELYTADGVIDKNSLWQRYAPLVRHEALRLQVRLPASVELDDLLQAGGIGLLHAVERYD AMQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVSAAMQRAEQRLHRAPTETEI AQELDMPLVEYQQILLDTNTSHLFSYDEWREEHGDSAEPVFQQHEDANPLKQLLEGDLRQ RVIAAIEALPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLASQS >gi|316919538|gb|ADCU01000008.1| GENE 201 212533 - 213843 1213 436 aa, chain - ## HITS:1 COG:STM1959 KEGG:ns NR:ns ## COG: STM1959 COG1344 # Protein_GI_number: 16765297 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Salmonella typhimurium LT2 # 1 436 1 495 495 292 49.0 9e-79 MAQVINTNSLSLMAQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAISNRFTANIKG LTQASRNANDGISLAQTTEGALNEVNDNLQNIRRLSVQAQNGSNSDSDLKSIQDEITQRL SEINRISEQTDFNGVKVLSSDQKLTIQVGSQDGQTIDIDLKSINASTLGLDGFSVSKSSV QTGDAITSVTGDGTGAPIAVDLKSAATDLGLKDTSNLSLHALKDKNGALTGNYVVKSGND FYAASLDASTGKVALNKTDVKYTDPSNGLTTAATQAQQLVKIGVDSTGANKGYVTFQGKS YEAAAGALANGKDKASGNTTAGGTAIDTTLVVSGAGATDTFAGVSSADPLKTLDAALSKV DSLRSSLGAVQNRFDSVINNLNSTVNNLTSSQSRIQDADYATEVSNMSRANILQQAGTSV LAQANQSTQNVLTLLR >gi|316919538|gb|ADCU01000008.1| GENE 202 214135 - 215544 982 469 aa, chain + ## HITS:1 COG:STM1960 KEGG:ns NR:ns ## COG: STM1960 COG1345 # Protein_GI_number: 16765298 # Func_class: N Cell motility # Function: Flagellar capping protein # Organism: Salmonella typhimurium LT2 # 1 468 1 465 467 327 47.0 3e-89 MASISSLGIGSGLDLNGLLDKLSTAEQQRLTPYTTQQTSYKAQLTAYGTLKSSLEKFDTL SKDLSSADFFNSTKASVHDAFSVTTNAKAVAGNYTVHVTQLAQAQSLTTQKEITDQSAQL GTTGATDRKISITQGNPAKTVDIPLKDNQTSLLEMRDAINGAKAGVKASIVRVGDNQYQL ALTSSATGSANQMSVQVSGDDQLGSYINYTAGSSSNAMKETVAAQDSIIEMNGTKITRSS NTITDAPQGVTIELKAKSKTADAENLIISADNSGAMDKIKSWVDSYNSLLDTFTSLTKYT PVKTGEAQSKTNGALLGDNTLRGVQAAIKGALSSAQDNPELKGLGNLGITTDGKTGKLTV DSDKLTKAFTDHPDQVANFFVGNGKDSGMATNIHSEIQSYIKAGGVIESTTKSINTNLDR LSVRIDSVSDSIQETIDRYKAQFVQLDTMMSKLNSTSSYLTQQFTAMNS >gi|316919538|gb|ADCU01000008.1| GENE 203 215562 - 215975 426 137 aa, chain + ## HITS:1 COG:YPO1840 KEGG:ns NR:ns ## COG: YPO1840 COG1516 # Protein_GI_number: 16122091 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellin-specific chaperone FliS # Organism: Yersinia pestis # 1 132 1 132 132 181 73.0 5e-46 MYKATGSQAYADVGLESGVMSASPHQLIVMLFDGAHSALIRARLHMQAGQTQLKGQSITK AINIIDNGLKAGLNLEKGGELAENLAALYDYMVKRLLHANLHNDEATLQHVTDLLDNIAD AWRQIGPQSQLNQQDHL >gi|316919538|gb|ADCU01000008.1| GENE 204 215975 - 216337 277 120 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_2416 NR:ns ## KEGG: NT01EI_2416 # Name: not_defined # Def: flagellar protein FliT # Organism: E.ictaluri # Pathway: Flagellar assembly [PATH:eic02040] # 1 120 1 120 120 111 50.0 7e-24 MYGIQPLSHAYRNILSISESMLDLAKRSEWDSLVKLEMEYLQAVAKTTELMPISEVDSAM QTELRRVLAKILDNEAEIKRLLQARMDELSQIIGKTSRQQAVTHTYGQFSDNEGYPNDLL >gi|316919538|gb|ADCU01000008.1| GENE 205 216561 - 216833 116 90 aa, chain - ## HITS:1 COG:yoaF KEGG:ns NR:ns ## COG: yoaF COG3042 # Protein_GI_number: 16129747 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Escherichia coli K12 # 1 89 1 79 84 74 49.0 6e-14 MKLHTLLLVGLGGLVMAGCHSGHKDPETSSDRQTVPVEKTIGMANPASVYCLTLGGKEIN ITTDLGVHTDCLLPSGERIDEWTLYRRDHS >gi|316919538|gb|ADCU01000008.1| GENE 206 217110 - 217772 612 220 aa, chain + ## HITS:1 COG:no KEGG:ROD_16031 NR:ns ## KEGG: ROD_16031 # Name: not_defined # Def: putative lipoprotein # Organism: C.rodentium # Pathway: not_defined # 1 220 1 220 222 302 68.0 6e-81 MATLRNLKTALLIGALALAGCATKTATPEQYSGFLKDYSNLTETKSASGLPVLRWVDPSF KSSHYDKLIYNPVTYYPEPKPTTQIGKNVLEGVLNYTNTKLKAAAAQRSTLVTQPGPRTL IFRGAITAVDTSKEGLQFYEVIPIAMVVAGTQAATGHRTMDTNLFFEGELIDSQTNKPVL KVVRKSSGKQLSNSNQLLTVDDLKAVIDNMATDATMFDVK >gi|316919538|gb|ADCU01000008.1| GENE 207 217701 - 217913 93 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVSRALGTGFFCLKNRVLLLIRIKKASCMWQLAGECLLKFECLFHVKLFNIEHGGVGGHI VDDGLQIIHG >gi|316919538|gb|ADCU01000008.1| GENE 208 218053 - 218334 292 93 aa, chain - ## HITS:1 COG:no KEGG:ETAE_2135 NR:ns ## KEGG: ETAE_2135 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 5 89 3 87 98 79 45.0 4e-14 MKKYYLLLALPAALLVGCVSAPKGFVRLDDHAADQAVIYRYDPEKVDKAAMDADALSYCK ENGFDQATQIPPLASSIPTLKRMAYTCSYAVKK >gi|316919538|gb|ADCU01000008.1| GENE 209 218472 - 218684 200 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKASYISYYDGLDEKGKVVFQGNGSHIVNSETEEPSPHEMLAAINQYLIKSAKAHNSAIA RIVIKGLFKL >gi|316919538|gb|ADCU01000008.1| GENE 210 218827 - 219039 114 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLNWVISGGAERHQLAVFQPDKKMFTCEGDGRLADKDTLTLMLGASQIGLCVSQINHELW VVREMAIQKK >gi|316919538|gb|ADCU01000008.1| GENE 211 219592 - 219960 161 122 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_3049 NR:ns ## KEGG: NT01EI_3049 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 122 1 122 122 84 36.0 8e-16 MHGIRNLSLICCIGLTGCVVADLDSSNYDYFPYVQTFQKPQTMGHTDVQKRRDDLYECGV NKKFSLNSWDEKFRRNSLQAGETMEQLDTRTKKVEGCMKSKGYVLLDFSECGPRKKPSGL CN >gi|316919538|gb|ADCU01000008.1| GENE 212 220225 - 220539 372 104 aa, chain - ## HITS:1 COG:YPO1831 KEGG:ns NR:ns ## COG: YPO1831 COG1677 # Protein_GI_number: 16122084 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar hook-basal body protein # Organism: Yersinia pestis # 1 104 1 103 103 98 64.0 4e-21 MAIVGIEGVLQQLQATAVSAANRSQNSEAPQGAFAAELKAAVNRISETQNNARVQAQNFE MGVPGVALNDVMVDLQKSGISLQMGIQVRNRLVAAYQDIMNMQV >gi|316919538|gb|ADCU01000008.1| GENE 213 220567 - 220773 59 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSCKTDSLTRYQRNVFNQSLFLEGLRLTKVGRVLFCGEGKFDGRIRPYFCVYLAALLFDL YGRVMRYG >gi|316919538|gb|ADCU01000008.1| GENE 214 220825 - 222546 1547 573 aa, chain + ## HITS:1 COG:YPO1830 KEGG:ns NR:ns ## COG: YPO1830 COG1766 # Protein_GI_number: 16122083 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway lipoprotein # Organism: Yersinia pestis # 1 573 1 570 570 667 68.0 0 MNASANGTAGTTAKSGDGGFATLVNRLRANPKIPLLIAGAIAIAVVAVLALWAKSPDYRV LYSNISDRDGGAIVTQLTQMNIPYRFADNGTALLIPADKVHETRLRLAQQGLPKGGAVGF ELLDQEKFGISQFSEQINYQRALEGELSRTIETLGPVQTARVHLALPKPSLFVREQKQPS ASVTLNLQPGRALDEGQINAIVYMVSSSVAGLPAGNVTVVDQGGHLLTQSDGTGRDLNAT QLKYANEVESRIQRRIEAILQPMVGNGNVHAQVTAQIDNAVREQTDEEYKPNQAPNQAAV RSQQLSDSSQSGGQLSGGVPGALTNQPAPAATGNITNPPQAGGANANTANAQRPASSTID TNGRRSSSASNARRDETINYEVDRTIRHTQQKAGNVDRLSVAVVVNYTTNASGKSIPLTP QQLEQVTALVREAMGFSATRGDTLNVVNTPFTTSAEESGDVPFWQQSSFFDLLMTLGRYL LVLIVAFILWRKLVKPLLNKQLANAQPARRVEPTPIVTTPVQPAKPSNEEIQNRRKSQQR ATAEQQAQRVRDMAEQDPRVVALVIRQWMSNEQ >gi|316919538|gb|ADCU01000008.1| GENE 215 222543 - 223535 1133 330 aa, chain + ## HITS:1 COG:YPO1829 KEGG:ns NR:ns ## COG: YPO1829 COG1536 # Protein_GI_number: 16122082 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Yersinia pestis # 1 330 1 330 330 471 84.0 1e-133 MTMTATEKSAILLMTIGEDRAAEVFKHLSTREVQHLSTTMATMSQVSHQQLGEVLNEFQD EAEQYEALSVNASDYLRSVLVKALGEERASSLLEDILESRETASGIETLNFMEPQAAADI IRDEHPQIIATILVHLKRAQAADILAQFDERQRNDVVLRIATFGGVQPTALQELTEVLNG LLDGQNLKRSKMGGIRTAAEIINLMKTQQEESVIEAMRTYDGELAQKIIDEMFLFENLVD VDDRSIQRILQEVESESLLIALKGANEALREKFMRNMSQRAADILRDDLSTRGPIRLSLV ESEQKAILLIVRRLAESGEVMIGGGEDAYV >gi|316919538|gb|ADCU01000008.1| GENE 216 223528 - 224289 709 253 aa, chain + ## HITS:1 COG:YPO1828 KEGG:ns NR:ns ## COG: YPO1828 COG1317 # Protein_GI_number: 16122081 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway protein # Organism: Yersinia pestis # 28 249 10 235 238 195 49.0 8e-50 MSNPPNNKEGFRKAVFPKATIEETNQQWQRWEMRDFSAPRKPKIPAFKMEPLPPAAESTP AVIAQAELEQLREDAQMQGYQHGLQQGEKQGYDTGFQQGLNEGRSQGLQQAQAEQQPLLD HWRQLAQEFQSSLQAMDNVIAARLMQMALTAAKQIIGQSPVCDASAVLQQIQHLINQEPL FNGNLQLRVNPQDLPIIQQQLGVQLEQQGWRLLADTQLHRGGCKISAEGGELDASIATRL QELCKLAAPELPL >gi|316919538|gb|ADCU01000008.1| GENE 217 224286 - 225647 1286 453 aa, chain + ## HITS:1 COG:STM1972 KEGG:ns NR:ns ## COG: STM1972 COG1157 # Protein_GI_number: 16765310 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway ATPase # Organism: Salmonella typhimurium LT2 # 1 452 1 454 456 723 83.0 0 MTQRLNTWLSTLDAFEKRIPQIPPARRYGRLTRATGLVLEASGLQLPIGATCLIERNDGV KIQQVEAEVVGFNGQQLFLMPLEEVDGIVPGARVCSQGGGLQSGGKQLPLGPMLLGRVLD GGAKPLDGLPPPEEADVGSLTTMPFNPLQRTPIVDVLDVGVRAINALLTVGRGQRMGLFA GSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGDEGRKRSVVIAAPADVS PLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVF AKLPALVERAGNGTHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGH YPAIDIEASISRAMTSLISDDHYARVRRFKQLLSSYQRNRDLISVGAYAKGSDPMLDQAI TLYPHLEAFLQQGIFERSGYTDACSSLQALFPA >gi|316919538|gb|ADCU01000008.1| GENE 218 225842 - 226282 356 146 aa, chain + ## HITS:1 COG:YPO1826 KEGG:ns NR:ns ## COG: YPO1826 COG2882 # Protein_GI_number: 16122079 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar biosynthesis chaperone # Organism: Yersinia pestis # 3 142 5 144 148 110 60.0 1e-24 MSSPMSTLRDLAQQDVDDATTALGKSRQAYLHAEQQLSMLLNYQDEYRQKLNQGMSGGMD ASRWQNYQQFIRTLDQAIDQHRIRLNQCNVRLVTATRCWQEKQQRLNAFCTLHERQEQQL KMQLNKQDQKRMDEYAQRAAMRREKS >gi|316919538|gb|ADCU01000008.1| GENE 219 226279 - 227622 951 447 aa, chain + ## HITS:1 COG:STM1974 KEGG:ns NR:ns ## COG: STM1974 COG3144 # Protein_GI_number: 16765312 # Func_class: N Cell motility # Function: Flagellar hook-length control protein # Organism: Salmonella typhimurium LT2 # 63 397 48 355 405 125 37.0 2e-28 MTSQLLAVTAANHTATPSNSAGANAQSESAAPFSDVLSQAHTLTKGRQTPQDTSKQTGSA LTAKTDLKALQAALAKTLQQAKTQPEEGKDAQQLLSQLAQLDPQQQQKLLASLNVSLNDK GKAPLDGSVQALTESLTGKETDKETEQAGQAAISALLAMLPNSLPKALSDTPVTDTSEPA LTLLSGENKKDASRDLHLLLKTDKPDAELDEQQISLPITAASSKKVDPSALKSTVETKAV PTNATDIPLKLAAQPENALPQHSETSALQPAHAQPHALTNITASSPVITNTIAAPTTPLP TPVLNAQLGSSEWQQALGQQIMMFNRNGQHSAELRLHPQDLGTLQISLRIDDNQAQLHMA SGHSQVRAALEAALPQLRTALADSGIQLGQSSVGSDAQPQWNGSQQNSADRQATSGVFSI SENHDDAVIATAVASKSVRVGGVDISV >gi|316919538|gb|ADCU01000008.1| GENE 220 228463 - 228942 396 159 aa, chain + ## HITS:1 COG:ECs2683 KEGG:ns NR:ns ## COG: ECs2683 COG1580 # Protein_GI_number: 15831937 # Func_class: N Cell motility # Function: Flagellar basal body-associated protein # Organism: Escherichia coli O157:H7 # 1 159 1 154 154 152 51.0 2e-37 MSETTLPKNTKRRAKWVWILLILIIAGAGGGFYGWKYYQQQESLTESKPTPPPMPVFMPL DTFTVNLISDGEDADRVLYIGLTLRLPDEATRKRMNDYLPEMRSRLLMLLSRQHAATLAS EQGKTQLMSDIKTVLMPPIAPGQPKQIVSDVLFTAFILR >gi|316919538|gb|ADCU01000008.1| GENE 221 228948 - 229961 888 337 aa, chain + ## HITS:1 COG:YPO1823 KEGG:ns NR:ns ## COG: YPO1823 COG1868 # Protein_GI_number: 16122076 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Yersinia pestis # 1 335 1 332 333 567 84.0 1e-161 MSDSILSQAEIDALLNGDSDNAKPDSEVPLAGSESDVRPYDPTTQRRVVRERLQALEIIN ERFARQFRMGLFNLLRRSPDITVGAVKIQPYHEFARNLPVPTNLNLIHLNPLRGTALMVF APSLVFMAVDNLFGGDGRFPTKVDGREFTHTEQRVIKRMLRLALDAYRDAWSAIYKLEVE YVRSEIQVKFTNITTSPNDIVVTTPFTVEVGALSGEFNICIPFSMIEPLRELLVNPPLEN SKQEDQHWRDTLSKQVQHSELELVANFVDIPLRLSEVLKLQPGDVLPIEKPEKLIANVDG VPVLTCQYGSQNGQYALRVERLINPILNALSEDQPNE >gi|316919538|gb|ADCU01000008.1| GENE 222 229954 - 230391 520 145 aa, chain + ## HITS:1 COG:YPO1822 KEGG:ns NR:ns ## COG: YPO1822 COG1886 # Protein_GI_number: 16122075 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar motor switch/type III secretory pathway protein # Organism: Yersinia pestis # 1 145 1 138 138 187 73.0 4e-48 MSDVNKPSAEGHDDAADLWAEAMNEQQTTENTLAKSAVENSADEIFQNLDNPSPLAGNLH DIDLILDIPVKLTVELGRTKMTIKELLRLSQGSVVALDGLAGEPLDILINGYLIAQGEVV VVADKFGVRITDIITPSERMRRLSR >gi|316919538|gb|ADCU01000008.1| GENE 223 230391 - 230792 319 133 aa, chain + ## HITS:1 COG:YPO1821 KEGG:ns NR:ns ## COG: YPO1821 COG3190 # Protein_GI_number: 16122074 # Func_class: N Cell motility # Function: Flagellar biogenesis protein # Organism: Yersinia pestis # 17 124 1 117 122 98 52.0 2e-21 MIPATSTVTSAPATPVVPAGSVLTQVGSTLGAILLLILIIGWLVKRLGFAPKNSRNNLLN VRASCSLGARERVVVIEVDNQCLVLGVTSQNITHLHTFTAPPSEAEPVAKKQDFSQIFKQ VVQQQFGKRGDKS >gi|316919538|gb|ADCU01000008.1| GENE 224 230792 - 231538 704 248 aa, chain + ## HITS:1 COG:YPO1820 KEGG:ns NR:ns ## COG: YPO1820 COG1338 # Protein_GI_number: 16122073 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliP # Organism: Yersinia pestis # 16 248 14 246 246 342 88.0 3e-94 MRPHRFILGISAAALLLASPLALAQLPGIVSQPLANGGQNWSLPVQTLVFLTSLTFLPAA LLMMTSFTRIIIVLGLLRSALGTPSAPPNQVMLGLALFLTFFVMSPVFDKIYQDAYQPFS QDKITMDVAMDRGAQPLREFMLRQTRETDLALYAKLANLPQMAGPEDVPMRILLPAYVTS ELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLLG SLAQSFYS >gi|316919538|gb|ADCU01000008.1| GENE 225 231565 - 231834 344 89 aa, chain + ## HITS:1 COG:YPO1820a KEGG:ns NR:ns ## COG: YPO1820a COG1987 # Protein_GI_number: 16122072 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliQ # Organism: Yersinia pestis # 1 89 1 89 89 91 84.0 3e-19 MTPESVMALGYQAMKVGLALATPLLLAALISGLVISLLQAATQINEMTLSFIPKILAVFA TMVIAGPWMLSLLLDYMRTLFTSIPSIIG >gi|316919538|gb|ADCU01000008.1| GENE 226 231843 - 232628 695 261 aa, chain + ## HITS:1 COG:YPO1819 KEGG:ns NR:ns ## COG: YPO1819 COG1684 # Protein_GI_number: 16122071 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliR # Organism: Yersinia pestis # 1 258 1 258 260 296 72.0 2e-80 MISFDTSQLALWLGQYFWPFVRMLALISTAPLLSEKAISKKTKVGLAMAITFLLVPNLGS NPTPVVSISGLWLVTQQILIGAALGLTMQFAFAAVRLAGEVIGLQMGLSFATFFDPSGGP NMPILARLLNLLTMLLFLSFNGHLWMISLLAESFQTLPISEQPLNGNGFLMLAQAGSLIF VNGLMLALPLITLLLALNTALGLLNRMTPQLSIFVVGFPLTLTIGMFSLSLMMPMLVPFS EHLFSEVFERLTQVMGGMQGL >gi|316919538|gb|ADCU01000008.1| GENE 227 232744 - 233724 1075 326 aa, chain - ## HITS:1 COG:STM1184 KEGG:ns NR:ns ## COG: STM1184 COG1344 # Protein_GI_number: 16764540 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Salmonella typhimurium LT2 # 1 326 1 317 317 311 56.0 1e-84 MRLSTSMMYQQNMGSITDAQSEWQRIGQQLTSGKRVINPSDDPLAASQLVGLKQAQAQND QYTMARGYARQGVSMEESVLQQVTSTLQDITPVLVDGASSGSKSDDDRASIAKQLEGMRD QLLNLANSSDGNGRYVFAGFKNDTAPFEKVTDPVTGKVTVNYKGGDTAVTQKVDAARDMT ISHTGSDVFQKASSNPIKEPDGSVSSDIFSTLQKAIDALKTPIAGATDAEKKGVSDAIDS ANRGLRNTLNNVSQVRAELGTNLKELDSLDAVGSERAMTYTSRISSTQDVDWYQSISDYS LRQVALQASYKAFTDMQGMSLFQMNR >gi|316919538|gb|ADCU01000008.1| GENE 228 233740 - 235425 1532 561 aa, chain - ## HITS:1 COG:YPO1808 KEGG:ns NR:ns ## COG: YPO1808 COG1256 # Protein_GI_number: 16122060 # Func_class: N Cell motility # Function: Flagellar hook-associated protein # Organism: Yersinia pestis # 3 560 4 552 554 488 57.0 1e-137 MANLINSAMSGLSAAQTALSVTSNNLSNVYTQGYNRQTVSFAQSGGISTSTGFIGNGVNV SGINREYNSFIVGQLRQGQSDYASTTAYYQQVSQIDNLLADSNNSLSANMQDFFSNLQNL VSNPSDPAARQTVLAKANGLVNQFKTTDEYLKNLESNANVTVSNSVEQINNYTKQIASLN DQISRLTGASGGSAPNDLLDLRDQMATQLNQIANVEITMQDGAMNVSFAGGLSLVQGNDA YKLEAIPSSANPQRLTIGYNRGSGTASEVPEGRITGGSLSGILQFRSGALDNARNQLGQI ALSMADSFNKVQQAGIDLNGDLTTNEPFFTIGQPSSFANSNNDKTVNASISAKYTDVSQT KATDYRLEYDKNGKWQITRLSDNSKITDLTPDATGKLQFDGLEVTVSPAAAKSDSFTLKT TSSAVQGFGVAITDAAKIGAGTPEYDASGNLVPDASGKGDNTNAQKMLDLQKAQTVGGKS TFNEAYAGLVGTVGNQTNSAKVDSTAQGNVVKQLTQQQQSVSGVNLDEEYGNLMRFQQYY QANAQVIQTATTLFSALLNIR >gi|316919538|gb|ADCU01000008.1| GENE 229 235694 - 236146 -264 150 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVSALARFYPKRHLRSGLVSQILYGIAGKYFVRRSTNAFPWHRWLRRPMRGASARPFKPR AFYPRCHLRSGLVSPIPGAPNSVTTSLSCRLSLRPLKLKPGHAFCFDVDLSGTLFFSRKE ECRLGFADKDVGERTEEPGWRLPFVPLRPE >gi|316919538|gb|ADCU01000008.1| GENE 230 236320 - 237258 904 312 aa, chain - ## HITS:1 COG:YPO1807_2 KEGG:ns NR:ns ## COG: YPO1807_2 COG1705 # Protein_GI_number: 16122059 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Yersinia pestis # 167 312 1 147 147 206 73.0 3e-53 MNDSFSLGSAAYDAQALNQLKRHTAAGSDKAIRETAKQMEGMFVQMMLKSMRAALPQDGE LSTEQTKLYTSMYDQQIAQDMSGSLGIADMLVQQLSGNKTSIPDSVGTTPMALDGETIQS MPVRALEQVMRRAMPRIPQNGSPMPTSNGEFVTQLSGAARAVSQQSGIPHQLIVAQAALE SGWGQREIPTTDGSRSFNLFGIKAGKSWDGPTTEITTTEFENGVAHKVKAKFRVYGSYLE AISDYVQLLTNNPRYANVTSANTPEQAAHALQKAGYATDPNYASKLVQVIGQIKNAGEQV VKAYTTDLERLF >gi|316919538|gb|ADCU01000008.1| GENE 231 237258 - 238394 1027 378 aa, chain - ## HITS:1 COG:YPO1806 KEGG:ns NR:ns ## COG: YPO1806 COG1706 # Protein_GI_number: 16122058 # Func_class: N Cell motility # Function: Flagellar basal-body P-ring protein # Organism: Yersinia pestis # 11 378 2 369 369 485 82.0 1e-137 MKHSSRRWAQRMTSLMLGLLVSLSLFTQTASAERIRDLTTVQGVRDNALIGYGLVVGLDG SGDQTMQTPFTTQSLNNMLSQLGITVPAGTNMQLKNVAAVMVTAKLPPFSRAGQSIDVVV SSMGNAKSLRGGTLLMTPLKGVDNQVYALAQGNVLVGGAGASAGGSSVQVNQLAGGRISG GATIEREVQSTFGNSNVINLQLNDEDFSLAQRISDSINRFGGMGSATPLDARTVQVLVPQ GNSNQVRVLANIQNIEVSVGSFDAKVIVNSRTGSVVMNRNVELDSCAVAQGNLSVVVDRQ NTVSQPNTPFGGGQTVVTPNTQISVQQGQGSLQQVRSSANLNSVVRTLNALGATPNDLMS ILQAMQSAGCLRAKLEII >gi|316919538|gb|ADCU01000008.1| GENE 232 238432 - 239184 550 250 aa, chain - ## HITS:1 COG:YPO1805 KEGG:ns NR:ns ## COG: YPO1805 COG2063 # Protein_GI_number: 16122057 # Func_class: N Cell motility # Function: Flagellar basal body L-ring protein # Organism: Yersinia pestis # 27 250 6 229 229 336 82.0 2e-92 MSIKPHNVMTSNAVARPALMPCKIAALSAALLLSGLLSGCAYIPHDQIVKGATTASPAPA APTVANGSIFQSVQPMNYGYQPLFEDRRPRNVGDTLTISLQENVSASKSSSANASRNGKS SFEVATAPRYLEGLLGNARADMNMSGDNEFGGKGGANANNTFNGTITVTVAEVLANGNLK VVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVVSTQVADARIEYVGSGYINEAQNMGWL QRFFLNLSPY >gi|316919538|gb|ADCU01000008.1| GENE 233 239198 - 239980 803 260 aa, chain - ## HITS:1 COG:STM1179 KEGG:ns NR:ns ## COG: STM1179 COG4786 # Protein_GI_number: 16764535 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Salmonella typhimurium LT2 # 1 260 1 260 260 384 87.0 1e-107 MIRSLYIAKTGLEAQQTNMDVIANNLANVSTNGFKRQRAVFEDLMYQTLRQPGAQSSEQT TLPSGLQIGTGVRPVATERLHSQGNLSQTDNSRDVAIKGQGFFQVQQPDGTLAYTRDGSF QVDQNGQLVTSSGFQVVPAITIPANATKLTIGRDGIVSVNQQGQTATTQVGQLTLTTFIN DAGLESVGENLYQETESSGAPTESTPGLNGAGMLYQGYVETSNVNVAEELVNMIQTQRAY EINSKAVTTSDQMLQRLTQL >gi|316919538|gb|ADCU01000008.1| GENE 234 240020 - 240775 775 251 aa, chain - ## HITS:1 COG:STM1178 KEGG:ns NR:ns ## COG: STM1178 COG4787 # Protein_GI_number: 16764534 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Salmonella typhimurium LT2 # 1 251 1 251 251 323 72.0 2e-88 MDHAIYTAMGAASQTLEQQAITANNMANASTPGFRAQLAALRAVPVEGDSIETRTLVAAS TPMHDMSMGKLDYTERPLDVALQQDGWLAVRNADGTEAYTRNGNLQINTAGQLTSQGNLV IGDNGPIAIPDRAEITIAADGTITALGAGDQPNTTTQVGRLKLVKATSQEMAHGDDGLFH LTPEAQQQRGATLTLDPEMRLMPGVLEGSNVKPVDTMVDMIANARRFEMQMKVIRSVDDN EQKANQLLSLS >gi|316919538|gb|ADCU01000008.1| GENE 235 240844 - 242088 1022 414 aa, chain - ## HITS:1 COG:YPO1802 KEGG:ns NR:ns ## COG: YPO1802 COG1749 # Protein_GI_number: 16122054 # Func_class: N Cell motility # Function: Flagellar hook protein FlgE # Organism: Yersinia pestis # 1 414 1 428 428 409 58.0 1e-114 MGFNQAVSGLNAAASNLDVIGNNIANSQTVGFKSGSVTFADMFAGSKVGLGVKVASVQQD FTDGITTTTNRGLDVAISGNGFFRMQDANGGVYYSRNGQFTKNQDNFLTNAQGVFLTGYP AAGSPPTIQQGAQPSPIQIPTGMMPAKASSSGNMSMNLNSSHEVPKNSPFKVDDVDSYTY ATSITTYDSLGNTHNMNLYFVKGAPVAATPPATGMTTPWTVYSVDSAAAAGTAPQNAGKL EFDQNGTLQNPGTPLALNMAANNGAPAQNFNLTFTGSMQQNTGKDGVTAKSQDGYAAGEM TGYQINDDGTITGTYSNQQTQLLAQIVMANFANPEGLQSEGNNMWKESATSGQAIVGVAG ASGLGALTSGAVEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILQTLVNLR >gi|316919538|gb|ADCU01000008.1| GENE 236 242170 - 242871 641 233 aa, chain - ## HITS:1 COG:STM1176 KEGG:ns NR:ns ## COG: STM1176 COG1843 # Protein_GI_number: 16764532 # Func_class: N Cell motility # Function: Flagellar hook capping protein # Organism: Salmonella typhimurium LT2 # 1 233 1 232 232 229 62.0 2e-60 MAVSVSLNDPVDNSSATNKTNGTNSLTSQNSQDLSNSFLTLLVAQLKNQDPTNPLQNNEL TSQLAQINTVSGIEKLNTTLGSISGQINSNQSLQASSLIGHGVMIPGKNILAGKEEGATT TSTTPFGFELESGAQSVVVTISDANGAVVKQIDLGTQTAGVHSYTWDGTQTDGTNVPNGA YTFSVSATNQGQPMVVQPLHFGMVNGVTKNGNGALLELGMAGTATLDDVRQIL >gi|316919538|gb|ADCU01000008.1| GENE 237 242883 - 243287 473 134 aa, chain - ## HITS:1 COG:YPO1800 KEGG:ns NR:ns ## COG: YPO1800 COG1558 # Protein_GI_number: 16122052 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Yersinia pestis # 1 134 1 134 134 213 87.0 1e-55 MSMLNIFDISGSALAAQSQRMNVAASNMANADSVTGPDGEPYRAKQVVFEVQAAPGQETG GVKVSQLVDDPSPERLVYQPGNPLADAKGYVRMPNVDVVGEMVNSIAASRSYQANVEVLN TTKSLMMKTLTLGQ >gi|316919538|gb|ADCU01000008.1| GENE 238 243293 - 243742 342 149 aa, chain - ## HITS:1 COG:YPO1799 KEGG:ns NR:ns ## COG: YPO1799 COG1815 # Protein_GI_number: 16122051 # Func_class: N Cell motility # Function: Flagellar basal body protein # Organism: Yersinia pestis # 13 149 1 137 137 207 79.0 7e-54 MAARPNPLSGEGMLDKLDAALRFQQEALNLRAQRQEILAANIANADTPGFQARDIDFSSQ LTRAIEQGRVNGSGVELKTTSSRHIPAQSFQPPELDMLYRVPDQPSLDGNTVDMDRERTQ FADNSLRYQTDLTVISGQIKSMMSVLQQG >gi|316919538|gb|ADCU01000008.1| GENE 239 243944 - 244624 459 226 aa, chain + ## HITS:1 COG:YPO1798 KEGG:ns NR:ns ## COG: YPO1798 COG1261 # Protein_GI_number: 16122050 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar basal body P-ring biosynthesis protein # Organism: Yersinia pestis # 43 226 49 232 232 183 46.0 3e-46 MRCDLKKWPLFLTSVLLTGFFLSSAHADSALQEGLTQYFGQQFTAENQHVKVNIRSPQSQ WPTCEIPQFSMPSSARRWGTLSVLVQCPQDKRYLQVEVQVTGGYPVASAPLSRGQHISAA DFNIMQGRLDRLPTGSIMEISQLDNAVLTRDLAAGQSVTSSMMRRTWIIKAGQSVQILAQ GDGFNVTSEGKALNNAAIADNVRVRLASGQIISGKATEQGTIELLM >gi|316919538|gb|ADCU01000008.1| GENE 240 244812 - 245111 331 99 aa, chain + ## HITS:1 COG:YPO1797 KEGG:ns NR:ns ## COG: YPO1797 COG2747 # Protein_GI_number: 16122049 # Func_class: K Transcription; N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Negative regulator of flagellin synthesis (anti-sigma28 factor) # Organism: Yersinia pestis # 2 98 3 100 100 88 62.0 3e-18 MSIDRTHSLSGVSPIQPREASEIQQQKRKEATSQPAVDGTQVKLSDAQSRLMQPNGQDIN VERVEALKLAIRNGELTMDTGKIADALLQDTHDLLKSND >gi|316919538|gb|ADCU01000008.1| GENE 241 245127 - 245552 440 141 aa, chain + ## HITS:1 COG:YPO1796 KEGG:ns NR:ns ## COG: YPO1796 COG3418 # Protein_GI_number: 16122048 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar biosynthesis/type III secretory pathway chaperone # Organism: Yersinia pestis # 8 141 9 146 146 103 47.0 7e-23 MPGTLDVLQQMLDTLKTLEVELENEQSLLCAGRVDAVRLQAATLEKENLLATLRHQEQHR HQTGDQAPYSEHSDLAPLWQTIMDLTQRLHDMNQHNGMLLNQHLTRNQGALDTLKSRHGQ SLYGPDGQAQSGMITGRKLSI >gi|316919538|gb|ADCU01000008.1| GENE 242 246182 - 246568 247 128 aa, chain - ## HITS:1 COG:no KEGG:NT01EI_1342 NR:ns ## KEGG: NT01EI_1342 # Name: not_defined # Def: flagellar protein FlhE # Organism: E.ictaluri # Pathway: not_defined # 4 127 9 133 134 122 57.0 3e-27 MGLLLTLPLAVNATGGSWSADSTGATLSHKGVSVSSRTLNPPVAIPAGAVIQDVVWRYQL LNPAPAGLAVQLCSPNRCFWLDSANGQSAALQGESAAVPLTMSLHIPGKGVVYPPVRVVS QQVIVNYR >gi|316919538|gb|ADCU01000008.1| GENE 243 246586 - 248661 2058 691 aa, chain - ## HITS:1 COG:flhA KEGG:ns NR:ns ## COG: flhA COG1298 # Protein_GI_number: 16129831 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhA # Organism: Escherichia coli K12 # 1 690 1 691 692 1068 83.0 0 MSNLAALLRMQGMNGAQWKILAGPILILMILSMMVLPLPPFILDLLFTFNIALSIMVLLV AMFTQRTLEFAAFPTILLFSTLLRLSLNVASTRVILLDGHTGGAAAGRVIEAFGHFLVGG NFAIGIVVFIILVLINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDEA KKRRSEVTQEADFYGSMDGASKFVRGDAVAGLMIMALNVVGGLLVGVIQHGMPVGQAAET YTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQDVGEQMVNQLFSNPRVMILSASVLGL LGLVPGMPNLVFLLFTAALLGIAYWISKREGRAAPSQAEQVVPEAPPVVEATWEDVQLED PLGLEVGYRLIPMVDFQQNGELLGRIRSIRKKFAQTMGFLPPVVHIRDNLELSPSGYRIL LKGIEAGRGEAHPGRWLAINPGSAAGTLEGEATVDPAFGLPAIWIDNALREQAQIQGFTV VESSTVVATHLNHLIGIHASELFGRQEAQQLLERVTQEMPKLTDDLIPSTISLTTLHKVL QNLLAEKVSIRDMRTIIETLSEHAPTQSDPYELTAVIRVALGRAITQQWFPGEGEIQVIG LDTPLERLLLQALQGGGGLEPGLADRLLEQAKQALQRQEMLGAPPVLLVNHALRPLLARF LHRSLPQMVVLSNMEISENRQLRMTSTIGAA >gi|316919538|gb|ADCU01000008.1| GENE 244 248654 - 249805 1022 383 aa, chain - ## HITS:1 COG:YPO1790 KEGG:ns NR:ns ## COG: YPO1790 COG1377 # Protein_GI_number: 16122044 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Yersinia pestis # 1 381 1 381 386 555 72.0 1e-158 MSEDSDLEKTEDPTSHKLEKAREKGQVPRSRELTSMLMLAAGISILLIGGEHLARQLAAM ISQGLQFDQLLISNDKQMLRQLGNLLQQAVAALMPVLLGLMLVGWAAPMLIGGFFFNPGS IKFDLSKMSLLSGLKRLFSSQALAELLKGVLKVILVSWVAGWFLWHYWGQMLALIAESPL DAMGDALHLIGMCGLLIVLGLVPMVAFDVFYQIWSNLNKLKMTKQEIKDEFKEQEGDPHV KGRIRQQQRAAARRRMMSDVPKADVIVTNPTHYAVALQYQENKMSAPKVLAKGAGEIALR IKELGNQHRIPQLEAPPLARALYRHSEIGHHIPATLYAAVAEVLAWVYQLKRWQKEGGLA PKKPQNLPVPEALDFAGEKTTDE >gi|316919538|gb|ADCU01000008.1| GENE 245 249992 - 250336 329 114 aa, chain - ## HITS:1 COG:STM1808 KEGG:ns NR:ns ## COG: STM1808 COG3615 # Protein_GI_number: 16765149 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein/domain, possibly involved in tellurite resistance # Organism: Salmonella typhimurium LT2 # 2 105 4 106 113 137 60.0 4e-33 MFKIPANYRVTRSTPFFNRQTVPAALLSHHNTKAGVYGRLSVMQGAVKYYGFANEQAQTP EIELTIHAGQFGVSPPQYWHKVELLTEDTYFNLDFFAQEEIQAEKGDLSKVVDC >gi|316919538|gb|ADCU01000008.1| GENE 246 250347 - 251489 973 380 aa, chain - ## HITS:1 COG:ygbD KEGG:ns NR:ns ## COG: ygbD COG0446 # Protein_GI_number: 16130618 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Escherichia coli K12 # 7 380 5 377 377 283 42.0 5e-76 MADNHPLIIVGSGHAGLQLARNVRRLQASSGLVMICADDGVDYSKPQLSHAFSQQQTAQH LTRKTAEELRQELKMMLLNGQRVEAIHPNQRTVQVNGRTLAYSKLVLATGARAFIPPVAG DANEEILTLNSLQEYLYLRERMTRGERVLVIGGGLIGTEIAHDLAVAGKQVSVCDPSSYL LASLLPEFAAQRLSTVLRDLSCELMLNNTLEMLQRLPQGVRATFTRGEEREFDHVICAAG LRPNIELAAQAGLNVERGIVVDNQLRTSDSYIYALGDVAQIEGRLWPFLQPISQSAAALA KTLSGEPTHVSLPIMPINVKTPRFPIQLAGETCADDVTWQTDEMSDGLLAKGYRNDKLVA YIAGGSAQMQGLTLLRQLSM >gi|316919538|gb|ADCU01000008.1| GENE 247 251500 - 252897 1137 465 aa, chain - ## HITS:1 COG:STM2840_1 KEGG:ns NR:ns ## COG: STM2840_1 COG0426 # Protein_GI_number: 16766146 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Salmonella typhimurium LT2 # 1 393 1 394 394 588 67.0 1e-168 MAIQVKNNVYWVGKQDWELREFHGSEYSTHKGSSYNSYLIKEEKNVLIDTVWTPYAAEFV ANLEREIDLNKIDFIIANHAESDHSGALPALMAKIPNTPIYCTANGVNSIKGHYHQDWNF RVVKTGDSIDIGNGKKLVFVEAPMLHWPDSMMTYMTEDALLFSNDAFGQHLASACLFNDE IDQNELYNECIKYYANILTPFSKLVTKKIEEVLSLNLPLDMICTSHGIIWRDNPAQIVEN YLKWADSYQENQITLIYDTMWNGTRTMSEAIARGIRQADPSVVVKQFNLANSDKNDVLTE VFKSKGILVGSPTVNNVMLPQVAGLLEEMQGLRFTGKSAAAFGSHGWSGGAVDRISSRLQ DCGFMMMRGIKAEWKPTEDAVTQCEAFGAEFARQFGIPACCDTGCGGAEKATSGKWICRT CSWVYDPELGEPNQGVLAGTAWEDVPESFLCPVCLMGKDDFYPAD >gi|316919538|gb|ADCU01000008.1| GENE 248 253115 - 254413 983 432 aa, chain - ## HITS:1 COG:YPO1856 KEGG:ns NR:ns ## COG: YPO1856 COG2837 # Protein_GI_number: 16122107 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Yersinia pestis # 15 430 18 433 434 659 73.0 0 MSGKGCPVTGLTGGAEMPSRRRLLIGAGALGSALALGGAVKADTGTKPLATATSPKNARW QKQPFYGEHQAGVLTPQQASAMLVAFDVLATNAEDLQRLMKLLTERIAFLTHGGKAPHAD AKLPPLDSGIMGPDIYPDNLTITVSVGNSLFDERFGLAAQKPTQLQKMTRFPNDSLDANI CHGDLLLQICSNSNDSVIHALRDIIKYTPDLLSVRWRREGFISTHAAQSQGKETPINLLG FKDGTANPNASDKPLMDDIVWVTADQQEPAWTVGGSYQAVRIIRFRVEFWDRTPLQEQQT IFGRDKASGAPLGMNHEHDEPDYSRDPDGKVIPLDAHIRLANPRTKETHSSLMMRRGYSY SQGVSNSGQLDMGLLFVCYQHDLDKGFITVQKRLNGEALEEYIKPIGGGYFFVLPGVKDE NHYLGEGMFQKV >gi|316919538|gb|ADCU01000008.1| GENE 249 254438 - 255562 1374 374 aa, chain - ## HITS:1 COG:YPO1855 KEGG:ns NR:ns ## COG: YPO1855 COG2822 # Protein_GI_number: 16122106 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted periplasmic lipoprotein involved in iron transport # Organism: Yersinia pestis # 1 374 1 376 376 585 82.0 1e-167 MSIQIFRRTALSLALLALPTTAALAAEALPQVKISVNDKQCEPMTLTIPAGKTQFIVHNN SQKALEWEILKGVMVVEERENIAPGFTQKMTATLEPGEYDMTCGLLSNPKGKIIVQAVDG ATAAKMDAMALVGPIAEYKVYVMQEVKQLVEQTKAFTDAVKKGDLATAQKLYAPTRQHYE RIEPIAELFSDLDGSIDAREDDYEQKAQDPNFTGFHRLEKVLFGDKTTKGADGYADRLMK DVLELQNRVTTLTFAPSKVVGGAAGLIEEVAASKISGEEDRYSRTDLWDFRANVDGAQKI VNLLRPMLEKANPQLLAKIDANFKTVDAILDKYRTKDGYESYEKLTAADRNAMKGPITAL AEDLAQLRGVLGLD >gi|316919538|gb|ADCU01000008.1| GENE 250 255607 - 256452 892 281 aa, chain - ## HITS:1 COG:YPO1854 KEGG:ns NR:ns ## COG: YPO1854 COG0672 # Protein_GI_number: 16122105 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Yersinia pestis # 1 273 1 273 282 423 87.0 1e-118 MFVPFLIMFREGLEAALIVSLIASYLKRTQRAQWLGIVWIGVILAAALCLGLGIFINETT GEFPQKQQELFEGIVAVVAVGILTYMVFWMRKVSRSVKTHLEGAIDNALNAGKGQGWALV AMVFFAVAREGLESVFFLLAAFQQDVGIQAPIGAVLGLVCAIIVGMMIYWGGVKLHLAKF FKWTSLFILFVAAGLAAGAIRAFHEAGLWNYLQDIAFNFTDVLSTHSLLGTLLEGIFGYQ EAPTVSEVLVYFLYLIPALIFFFMPQRAVDEAANRNASQSR >gi|316919538|gb|ADCU01000008.1| GENE 251 256832 - 257014 188 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSFTMGDSVQKIGGGPRMTVLAVNGDEITCVWNELGNERKETVDAKALTLYHEEGDFGVC >gi|316919538|gb|ADCU01000008.1| GENE 252 257225 - 258859 1195 544 aa, chain + ## HITS:1 COG:Z1140 KEGG:ns NR:ns ## COG: Z1140 COG2194 # Protein_GI_number: 15800661 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli O157:H7 EDL933 # 4 540 3 539 539 601 52.0 1e-171 MQRKVLKVSFLSLTIILAIYFTLVVNLPILLHFYRILTSLDNYKLGFAISIPLVLIAALN FVFTPFTFKPIFKPFFCIVLVISAFASYAQLKYKIIFDRSMIENIFETNSAEASSYYNFS VVLWVLFTGILPCILLMKTQIVYAHGVIARLGLRLVSMLVSLLIIALVASLYYQDYASVG RNNRTLNLEILPTNYLYSASQYINRRYLTKPIPFRKIGDDAKLVQKAGSKPTLVFLIVGE TARNQNQQLQGYPRPTNPYTSQEPDLIYFSKVSSCGTATAVSVPCMFSNMPRTHFDNNIA RNSEGLMDILQKAGVSTYWKDNDEGCKGACDRIPTQIVPTNSDKNLCDGDTCYDAVLLND LDKLIPNDRKNKTLAFHLIGSHGPTYYKRYPKEFRFFMPDCQRSDIENCTQQQLVNTYDN TIRYTDYVVSQFIQRLKGYEKDYNVALYYVSDHGESLGEDGLYLHGTPYKFAPEEQTRVP MEMWLSDSYVKAQGIDRACVASLAKNSEFSHDNLFHTMLSMMNVQTKEYDPNLDILKTCR TQNP >gi|316919538|gb|ADCU01000008.1| GENE 253 259135 - 259929 557 264 aa, chain + ## HITS:1 COG:STM2001 KEGG:ns NR:ns ## COG: STM2001 COG3228 # Protein_GI_number: 16765336 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 253 1 253 265 329 63.0 4e-90 MIKWPWNAGANTPLANYPWEEALAIPLLSTLTPRELQKLTLIASKFLQLKRIVPLQDLYI TPLIEARIALLFSLPVLELSIDWLDGFHEILLYPEPFIYHEEWQDDIGLVHAGPMVQAGQ CSAQGPVILNLMDVKDSFDLSGYNLIIHETAHKLDMRNAGVASGVPPIALKDVAQWEHDL HAAMASIQDEIDVVGEGATSLDAYAASEPAECFAVLSEYFFSAPELLAERFPEMYAHFKS FYRQDPLERQRQSLEQDTHFSHLS >gi|316919538|gb|ADCU01000008.1| GENE 254 259922 - 260575 237 217 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 16 193 145 323 398 95 33 2e-18 MLIMKDMAFSWEDRNPCLHNVNLHIHRGEQWVMTGENGAGKSTLLRLAAGLLVPSQGTLY LNGTETTSMKAVDKAAQAGMLFQEVERQLFHSSVVEEIRFGLRLQGLDKEVIEQRTADAL ALCELASVATKHPLDLHSGQRRMVAVACLCAMEPPLLLLDEPSRDFDPYWLAVFERWLSH SRERGATVLAISHDPEFTARNFQKVIHVCNGTVNMVS >gi|316919538|gb|ADCU01000008.1| GENE 255 260569 - 261381 474 270 aa, chain - ## HITS:1 COG:STM3074 KEGG:ns NR:ns ## COG: STM3074 COG1122 # Protein_GI_number: 16766375 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Salmonella typhimurium LT2 # 33 224 31 224 225 158 44.0 9e-39 MAVSVNIERLSVDIHHAFRLGPLSLQMEQGQWLAILGGNGSGKSLLASLLVGGLEETEVS LVEGRGEILGHNIMRSDIPLYAKQWVQQSPYLQFSGCCFTVEDEIAFGPQNLALPAPEIL SRVETALQRFGCQHLRQRNPQSLSGGEAQKVLLASVMVMHPKLLVLDQALGRLSIEATYQ CLDAILQYSRELQCSVILLEHRLFPAVDYCQQLILLDQGTTSPVYNHVLLSLIPQVILPE QLKKTLLDKPPHHNDLWDVLKPFLRDGQAC >gi|316919538|gb|ADCU01000008.1| GENE 256 261366 - 261917 175 183 aa, chain - ## HITS:1 COG:STM3073 KEGG:ns NR:ns ## COG: STM3073 COG0619 # Protein_GI_number: 16766374 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Salmonella typhimurium LT2 # 1 181 54 234 235 135 45.0 4e-32 MLPMGLGLWLVHGHWLHSLLSGSGGGTLAAPIFAITLWLRLLVFFAGAQLWLQKVSTPYF VQALFSSRLPPSIAYLCAGPLLLKEQLRQQLAAIREAQAARGVAFDGNVFQRIKTILPLL SPLLLQSLHDLSTRSAALDARAFRFFPHRTILNPVREHKFEPWLRFMLLGCLLIEGGSFW LYR >gi|316919538|gb|ADCU01000008.1| GENE 257 261865 - 262041 63 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLGQRAIFACSPAGRMERVTDCYHFGLASVALADKHYSSRYAADGTWVMACTWTLAA >gi|316919538|gb|ADCU01000008.1| GENE 258 262073 - 262654 383 193 aa, chain - ## HITS:1 COG:no KEGG:CKO_04299 NR:ns ## KEGG: CKO_04299 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 6 193 5 192 192 225 71.0 7e-58 MRKEHRFSSRSLVLIVICVAINMIAGQMISMLKLPLFLDSIGTVLCAVLAGPWVALFTGL VTNVLWGLLTGPIAAAFAPVAMVIGCVAGFMARAGWFRTFGRVIVSGVVITLALTVVAVP IRTYLFGGATGSGADFVVAYLHAVGEGLQESVAFTVLGLNLIDKILTVLIVWLLLRRMPE RTRHNFPQMAPIR >gi|316919538|gb|ADCU01000008.1| GENE 259 262657 - 263085 270 142 aa, chain - ## HITS:1 COG:STM3071 KEGG:ns NR:ns ## COG: STM3071 COG1661 # Protein_GI_number: 16766372 # Func_class: R General function prediction only # Function: Predicted DNA-binding protein with PD1-like DNA-binding motif # Organism: Salmonella typhimurium LT2 # 8 140 9 141 141 144 54.0 4e-35 MRAKDLVSSSQFYSLRLQSGAELIEQLRQFIQVNHIKAGWIASVVGSLSSVSLRYAGCEW TSLIEGKFEVIALGGTLDSQFEHLHMSVADETGRVIAGHVMSGNIVRTTLELIIGELCDV EFSRQHCVLSGYDELVITSKEG >gi|316919538|gb|ADCU01000008.1| GENE 260 263753 - 264397 360 214 aa, chain + ## HITS:1 COG:YPO1917 KEGG:ns NR:ns ## COG: YPO1917 COG0582 # Protein_GI_number: 16122165 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Yersinia pestis # 3 214 88 299 420 265 67.0 4e-71 MTEKTAASPEKCFEAVAMTWHKTNKKWSVDYTERILTSMKNHIFPAIGHVPITLLKTQHF TALLKVIEDKGFLEVASRTRQQLCNIMRYAVQQGLTENNPALHLEGVTAPPVKNHYPALP LERLPELLERIGGYQQRRQLTRLAVALTLHLFIRSSELRFARWSEIDFRHKIWTIPATRE AIEKVRFSDRGAKMRTPHIVPLSRQAITILKQIK >gi|316919538|gb|ADCU01000008.1| GENE 261 264452 - 264760 121 102 aa, chain + ## HITS:1 COG:YPO1917 KEGG:ns NR:ns ## COG: YPO1917 COG0582 # Protein_GI_number: 16122165 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Yersinia pestis # 1 97 319 415 420 159 73.0 1e-39 MSENTINRALRLMGYCTKTDVCGHGFRAMACSALVESELWSRDAVERQMSHQERNSVRAA YIHRAEHLDARKAMMQWWSDYLDVSREGYVAPYIYARRHKAA >gi|316919538|gb|ADCU01000008.1| GENE 262 265224 - 266111 388 295 aa, chain - ## HITS:1 COG:YPO1092 KEGG:ns NR:ns ## COG: YPO1092 COG0582 # Protein_GI_number: 16121393 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Yersinia pestis # 1 292 4 294 298 327 61.0 2e-89 MGILEQEMKQLAQQVGGSHKTVHDRIKLVQRFYKHLVVAQNIQIRRVEQLKARHIEGYIR ERLAQGITKRSLQNEMAAVRCILKQAGRDRLAQSERLNNCSLGLSGASRNSTRQAITLAH YCHALETAREKDAGLAAALELSRLMGLRSQEAVQSAQSLKTWQQALDRGESRLTVVFGTK GGRPRETVILDTGAVRRALDNAIFVAESRHGRLIDKPDLKRAMKYWHGQASRIGLTGAYS PYSLRYAWAQDAIRHYLAQGYSEKEVLAMTAMNLGHGDGRGRYVAQVYGRKEDTD >gi|316919538|gb|ADCU01000008.1| GENE 263 266761 - 267093 259 110 aa, chain - ## HITS:1 COG:chpB KEGG:ns NR:ns ## COG: chpB COG2337 # Protein_GI_number: 16132047 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Escherichia coli K12 # 2 109 8 115 116 90 44.0 8e-19 MDRGEIWLVSLDPIAGHEQSGKRPVLIVSKASFNKLTRLPVIVPVTSGGNFARAAGFTVL LDGAGTKTTGVIRCDQPRTIDMSARNGKRLERIPDAVVNEVLARLEAILS >gi|316919538|gb|ADCU01000008.1| GENE 264 267094 - 267351 292 85 aa, chain - ## HITS:1 COG:AGc1711 KEGG:ns NR:ns ## COG: AGc1711 COG2336 # Protein_GI_number: 15888279 # Func_class: T Signal transduction mechanisms # Function: Growth regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 85 19 103 103 61 37.0 3e-10 MYTTRLKKVGGSIMLAVPPAVLKTLELSTDSEVGMTIDNGCLIIEPQKRPRYSLEELLAQ CDPHAEMSEEEREWIDAPAVGKEIL >gi|316919538|gb|ADCU01000008.1| GENE 265 268050 - 269195 457 381 aa, chain + ## HITS:1 COG:RSc2619 KEGG:ns NR:ns ## COG: RSc2619 COG4694 # Protein_GI_number: 17547338 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 8 355 332 660 767 97 24.0 3e-20 MTLTGNMFYPEERVAFEQSKKNLDEELAVYKQDLEFLEKALTSRKNDLFKPLEIPDSHYS VEKIQQCSHDINSLVSKNNTRTKTLEKDKIAARDALRLTDVASFIQTINYDDELIRIENL KTEANKASTDLLDARTQVTEREKKITQLQGEQKDERKGAEKVNALLNHYFGHDSIQLEAK DDSIKTSVKFEIMRGGKSAFNLSEGECSLIAFCYFIAKLEEPESKGKELIIYIDDPISSL DGNHIFFMFSLIEGLIAKPIKNADNSNSYRYKQLFISTHNLDFLKYLKRLSIPKKKITVG EGKARNVEDKENFMLERNGRGSNIILMPAYLNDYITEFNYLFQQICKCRDQTMANESYEP FYGFGNNLRKFLAKRMRLPLH >gi|316919538|gb|ADCU01000008.1| GENE 266 269440 - 271242 164 600 aa, chain - ## HITS:1 COG:no KEGG:Pmen_3431 NR:ns ## KEGG: Pmen_3431 # Name: not_defined # Def: hypothetical protein # Organism: P.mendocina # Pathway: not_defined # 1 598 8 591 593 485 43.0 1e-135 MIDRLELTKNVQFYDLKIPLDNEERQITNDEILSILNSADDNIEPDSDYLINDFRVGRNF IDADVNFIYSLRVFPTLRPVYFMGEAEGGENFYDTIYAFILILEFDNSIAIIKKSCANIS DKLEKDFNLITSHSLAGTFNDSDVSFQKISTRSMTNSDKAIRSRSFESSDLKGAFSTHAA GRSIPYYLKLRQGPTIKTISGSGRLVEASQRISFDDIASWSYNQLCLVRQGGGVKDFLNY FAQQKELNEVMALTQPNALLIESTALYEKIESEGLRIKYKLPDGEDCYLSEKRLNKLFQK LEKVYEIRDDLTIDSAIGSAKIKRNNKTLTIESTILRRLKILSNGKEATLQSFIFKNGFY SITFQDPRYMYFMGNCFEDASGISEINSILDILMPVENMDKVLSEKGTFTKLSTKFSVES MFDLVEEIHKNDDYIFCDDLGNEWADHITFNKQDSCISFIHSKHGSKTTSASKLHDVVGQ AIKNLGYMYFSAPDLLDKVRNKLKKNYVNNNTETKIKKIRKGDTRKLKKYLDDLSKDVKL HRKCILSCSFISKNEVKREFGKLRRNLPVKPHVIQLLWILSSFSHAVKEVNAVPVIYCAK >gi|316919538|gb|ADCU01000008.1| GENE 267 271285 - 272292 403 335 aa, chain - ## HITS:1 COG:no KEGG:SPAB_01119 NR:ns ## KEGG: SPAB_01119 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 1 324 1 324 324 576 89.0 1e-163 MHNELFQLGFPVSELGDILQQLKERQMMSENAKEKSLRNYLTELGIIIPSTRNRWRLVEN ERLEILLAQVKQQIQQQIIGRKEHRPAIPRRMQRIHHKSASAWRGNSKAGLSQPLVKGQV VTYDDVLRLRSQGTELRLTFTCNSGENVLFADDESRWRSECCLPERMLLDLFSVDMTSAQ LIMTVENLGAYVDMPLVDGLILIFAPGLNYQPACRWISQFGQGIPWVHFPDLDPNGLTIA RQLSHALARPCRIWLPDFWPSAHQVNDMIGAGKHAWNTVPDCPQLTQLRQEQRWIEQEVL VVDYRFNAAMQRLVNHSGDEIALIESTENSIEQDV >gi|316919538|gb|ADCU01000008.1| GENE 268 272292 - 276875 1842 1527 aa, chain - ## HITS:1 COG:VC1714 KEGG:ns NR:ns ## COG: VC1714 COG3096 # Protein_GI_number: 15641718 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Vibrio cholerae # 8 1485 8 1461 1491 226 21.0 2e-58 MNHYPLIRSLSIVNINGIMARTLNLVNPHALRTSRQYGGTVSLLGNNGAGKTSLLGAFMF SQIPDIRYISLGTKDDFKVSTSIKDSEMFPRLGQPSIVALEIEARGTGHRHLYVVRAEKK TGTTLETQLFCLKLPDSVNPLDCLLDCKGQVAHPVTTDQLRDKAALLGCAIQSFKDPNSY MLALFQHGILPRACQSPDDKYRLAQILHSAMAGRLDKSIEKHLSAYLMAHTRGNIHSVVN MVHESMIKVRLTQQDLQNYQKDYQFFNSLLTLSLSFSANTWSVIEKTLAMNDEERTIIQK EKYRIERELEKIEESLSSLRRKEDAIKSEQSIAQQQMSDIEPRLLCARDGRIHFDHEQRA IGELNKLEPQLESAEEASKLQQGIVEELERRKSENEESQLRTAKQLSNVVSRYGIAQKMA SQYNHAKQLYDEINQWNMAFTLSELTAFIEQLANQEKEAGNFLNHAERQLRSHQEILNAY TFAANSARKLGDDISPPDAQRWFREKCGQLEKWRIENAQLGGRQQQQITLQSDHQKQRRL QQRLRDAGILTLPLSDEGFAQQLAMQQEQELHLNEQKEQLAQRQTEVQEQINQLDIDIAR YEQQSQQWHQYQPSVSYLRTIFPDDDLTPQRFEQLIFDHALHVKSLRQVVIGYETEIKQC QGRRDKLSGREAGSLEYLRTLAADVSGISVAELYADIEVQDAGYFEAALGPLMFAILVNG DVDDAARQLLTQYDEQWPLPDILLISVTQPIEVLRNEPFESELLFKDITNEYNTVESILP PWCVIDEPRYRRISQIRSEPVLGDKAREALILQLDQQIQLAEEKSETLEREIEDVERHNE HLKAVSAAPSFIWDDEPPLEDTRRQRSHRYTALTDIEEKHKSVSSQWKKSRSLLLALQEC EPDSKILFRDFPQELAEIADQIKRAEAAGRDIKRFQPLINQIEKEHPLLREEYPENIAQV RQQVEQKEKTWQTSAMRVRLVKELDSVRAHLNQEYVNAQKILEDEAQAQILLSGDQKRLD QDGERIKQELKNAKKELAEKDKFYSEMTSEITRHHQNRDDAKNDLDNLPFPYTFGLETKL ASQLAHLQSQLEKLNNNLRECYTKTAELHQQRSKEELNLTNQNNKLTALTEKIEQITQQR NGIISTLKADGSYGDLEPVMREMLNNGKAPSPGALLLVDQSLLTQLTRLTIEYSISSADP FMQQLASCGQDTSDIAEVCATLYSRAVALFRRRARQDIQRTTQPREMLQALSKAAKDAQK MLAETEAAFQMRRDELADALSRRINDEKRAISRLSAELTGIGFGQVASVRLEARTVKHFQ DTLNALKSGGYGMDDLFSTAGTVTEALAGLYKKINQHEIDGSHLLDHRNYLDIKTLIQRR GAEQFEPLNASSLSTGERIGSGLAVLIAVLRYWGRSSHGNKEPFTLPLVMDEVSRLDAAS QATVHELAVRTGCQMLVAAPETLGKITGTGYQLVRIVRTENTGVNGQSVARHQVKITGVR DAQQLPFDVDSYLATAENAESDEVKTI >gi|316919538|gb|ADCU01000008.1| GENE 269 276872 - 277645 385 257 aa, chain - ## HITS:1 COG:STM0993 KEGG:ns NR:ns ## COG: STM0993 COG3095 # Protein_GI_number: 16764353 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Salmonella typhimurium LT2 # 19 239 18 234 234 67 26.0 3e-11 MTELESTQGDQFNTFLDVMKSPLFPVVDYKLRRGINILPADYILYSFVNQAFNPLCEYYG CLSLSLCFSNESVYYLLPLRRGKIPLERFNELQMVTGLIIVAMELEKQLSQKEWFTTNQL LERMSNQLSETRLLELFRRRPGQQTQYDLSKIQDEIRKSLIVFDRYAFIQLSKDRQSFQT TPAIYRFIEPLRGLHQESEIPQRLAELIHEGYLVNIDEAVRDSVDEDLAESDRFSAEEEM DATGDLFASGTHEGEQL >gi|316919538|gb|ADCU01000008.1| GENE 270 277638 - 279038 653 466 aa, chain - ## HITS:1 COG:no KEGG:SPAB_01115 NR:ns ## KEGG: SPAB_01115 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 1 466 1 466 466 863 97.0 0 MDNVAPTLQQFTSPLSCILLKISKYQPNLHLTPNEFSYLAAMAMWGMEESSVESNSEHYL VQSGYDETTCHSIIRYVDERINEDPNTSDVRVNNFLKRALEQGLLSLAGMSVADVGGTYR LTQLAHDLLKPFQQSDELEDKETLSQRYLRIDQELSSLNATSDGEKITDSEWLVKVELFL PSLKDLLTGVFKNQEFLISKFHSMRSEIQTEIGISLETEIQQLLEIIRTLAGQINDLRML VMNRADAVLMQLEILQNTVVQKGGTQRLKNTLSSLFGSLMDVREFANHSLRDLSGFFSSV LDRIRIRIALDPNANLGYLIDRTIELFGRSSWSLALPSTVKLMQLREWDTPPPPADNALF LDDNDDEELVREMPAFQLESFAREFVEKALSDNKPVSNVSVIRNILSKFPFNETDRFRLA QCTIKELMKQSDNIQDDISSEWVLMDESANYEIEEQWLISQGDLND >gi|316919538|gb|ADCU01000008.1| GENE 271 281727 - 282206 310 159 aa, chain + ## HITS:1 COG:sbm_1 KEGG:ns NR:ns ## COG: sbm_1 COG1884 # Protein_GI_number: 16130818 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, N-terminal domain/subunit # Organism: Escherichia coli K12 # 7 158 274 425 585 284 88.0 4e-77 MILLPASFFFGIGLDLFMNIAMLRAARYLWSESVSQFGATNPKSLALRTHCQTSGWSLTE QDPYNNIVRTTIEALGATLGGTQSLHTNAFYESLGLPTDFSAHIARNTQIIIQEESEICR TIDPLAGSYFIESLTDQIVKQARAIIQQIDDVGGMAKGH >gi|316919538|gb|ADCU01000008.1| GENE 272 282226 - 282426 220 66 aa, chain + ## HITS:1 COG:sbm_1 KEGG:ns NR:ns ## COG: sbm_1 COG1884 # Protein_GI_number: 16130818 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, N-terminal domain/subunit # Organism: Escherichia coli K12 # 1 63 434 496 585 93 80.0 8e-20 MIEEASANEQSLIDQSKRVIVGVNKYKLGKEAETQVLEIDKVKVRNEQIAQLQRIRATRD NDANIK >gi|316919538|gb|ADCU01000008.1| GENE 273 282919 - 283653 755 244 aa, chain + ## HITS:1 COG:no KEGG:ESA_00986 NR:ns ## KEGG: ESA_00986 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 10 241 99 335 339 83 30.0 6e-15 MNKSKTPVNATLMAAPYVTGAEDGTIDASDVNFGVQCEISMWANPNYGDRVSLFWGELER VQFLEDTTRPLIYDIKDDFNPSALSDGFYDVYYTVFDGINTSTSEVTAVSVQAHLNPGSL AAPDIVDADDDGAVGYDEAVDGVDIHINYTGMAEGDIIALKLQGFDDETNAIKEDYTAPD YPVTAGDISAGYALFTVPYTGEFEKIGENAYAECWYSVTVLADNSHLSSQVTKIVVDVVP PYGH >gi|316919538|gb|ADCU01000008.1| GENE 274 283787 - 286621 1415 944 aa, chain + ## HITS:1 COG:no KEGG:ESA_00985 NR:ns ## KEGG: ESA_00985 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 15 484 1 476 684 264 37.0 2e-68 MISSSDLFATKFPQMADDGVIDQDELDSEGGVLFEVPAYSDAAVGDYITFNFDVEKSFYL YLESEPVNQYFPWSGTVPQDLLIDGSYQAWYTVIDYIGNQAASPISTVFIDRSHQGTLPP PTFPEAIDNVINDSAAVSGGGTPVAIPAYANIAVDDNVLVYWNGFDEQNQAIPDSATTVA YTVKAADLINGFTVTITTPYITSIGEGTAQAWYTVHSGSRIPERSVNSVPVIIDTVCECL PAPVFPDGTDGWIDANEALNGTPLSVPIYSNMRVGDIVTTYWQGYTSNGVLISAAYDMQH HPVVAADLVAGFSVTLPEAALYAINVGYGQAYYSVDFTQSASTGTSLTAQVNVDTEHCTC LPAPTFPEAVHGVIDTNAATSNGGTPMAVTYSPMQIGDTVTLQWTGYHNGSLTPVPGAVF SLTVEVNEANIRANHIVIVIPTQFILAIGDGYAVGNYQVAYRAGGIGYSEDGDVVISQKT QPSIKVMGARTSMHASGQSQVGRLCAFDALTGTPMSAYWYYEGESPATATHSFIDTQPSC PLVVCNASCNTDLITLNPSNITGNGGWSDDETTSGSFIALLNDKSVLGWGNPQYGGSTPP SCYNQSVYALYATFKAFAFLHNSGSVYAWGDSQEGGAVPSNILSRSDWLELAAAEGTFAC RGSHSPYIQVWGWGLDGDSPFNLNVPSNIACMSDLVSLHAGDNAFATVSAAGRVYAWGDK TAGGSVPSNISCLSNITSCCSSRRAFSVIYGCGKIAAWGDSDYGSNASSVSWVQNASRLV ATESAFTALLSNGGMACWGYNEFGGTMPSQYASRTDIVDVKATYGAFAALCADGSVLTWG SSEYGGNSKSVSSALVNIVSIAANATSFAALKEDGSLVVWGNSLYGGSTCNATGTLEDVL AVYGNTHAFIALKADGSVVAWGENASGVSTLPTMLDGNISYLKK >gi|316919538|gb|ADCU01000008.1| GENE 275 286949 - 287782 322 277 aa, chain + ## HITS:1 COG:no KEGG:Bcenmc03_4705 NR:ns ## KEGG: Bcenmc03_4705 # Name: not_defined # Def: HvnC; halovibrin # Organism: B.cenocepacia_MC0-3 # Pathway: not_defined # 8 275 38 303 324 260 50.0 3e-68 MLTSSQPSGSKVASLLSASFKDTAKGCDNNKLPAFLCTGVMLRGTQYSSSYHAWDPSPSS QSSGGVSFSYLRADSQYNKLAYGYVNGFIFYPYFSAPDGKYTDIDVMCSYPIDAGTENRT NKGCGASNTYPSQSGACQAQGITTAEQWYSHYQQGNENHSYQCGFTTADDSQYDTADSFY QSILSMAKIYQQSFNEQNELRLATWAQGMQNTLPIEAFFYLKGSSYGLSSAQNDQRDFSA STSKQLWVPVIELALPQSSGGKAIFTYRDSDQAILKK >gi|316919538|gb|ADCU01000008.1| GENE 276 287896 - 288096 202 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNLKVSLLIILNILLAGCSSSEQNHQTKTHDRKDVAHIVVGNNNKSLTINGDAYVVGNN KEKVQQ >gi|316919538|gb|ADCU01000008.1| GENE 277 288622 - 288912 155 96 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDNNVSELSLAEVARLIDTLMTCLTIEEGGSSLANINLSFIYDIESRFEARFISIEAGGP RLTDQSIVLLECIMLHAKHNPDFLFSLKEISELGCF >gi|316919538|gb|ADCU01000008.1| GENE 278 288909 - 289739 257 276 aa, chain - ## HITS:1 COG:PSLT041 KEGG:ns NR:ns ## COG: PSLT041 COG0583 # Protein_GI_number: 17233493 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 273 16 289 297 87 28.0 2e-17 MEEKSITRAAEILCITRSPLGKVICDLEERLDGKLFIRKYNTLEATPLAVSLYKKIKPIH DTLAAIEDDLSHKPKNIKVNLIFDVSMPYNIYKYYISILESEGMQFTHHRIFVTPEIMAH LKQAPSTIIFSFRGLSDIEGNHKVVLSTDCLSILVPEKVNHEHLCDPDYMHLVPVLIKSS PYIEQIKNCLSFSLKNHLPFLHFQEVDSDLFAMLYTVAHGSAIVVLPESIADIYQIKGVK KITFRDIIINKTVYHNLQTKELPIFNKIIETIEDLA >gi|316919538|gb|ADCU01000008.1| GENE 279 289696 - 289845 59 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQSISAARVILFSSMVTIKYLILFDIKKFTIYLIITTSKSRAFSIYDAL >gi|316919538|gb|ADCU01000008.1| GENE 280 290055 - 291587 892 510 aa, chain - ## HITS:1 COG:no KEGG:ESA_00987 NR:ns ## KEGG: ESA_00987 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 1 421 545 957 1027 139 33.0 3e-31 MLINHQLANNSAEDTAHVVVKDSAGNLMPNVAVAWSLSDSTMAAITQQSTTTDAQGEAHV AVKNSAAGTVTITATAQGKSGSTVGTFEAIPVSSVNVSMLINHQLANNSAEDTAHVVVKD SAGNLMPNVAVAWSLSDSTTAAITQQSTTTDAQGEAHAAVKNSAAGTVTITATAQGKSGS TVGTFEAIPVASVNVSMLINHQLANNSAEDTAHVVVKDSTGNLMPNVAVAWSLSDSTTAA ITQQSTTTDAQGEAHVAVKNSAAGSVTITATAGGKRGETQAIFAAVVKNVVVTATRTNRE ANNIDDDRAKVLVTDRDGNPVANQPVKWIIYSPTASILASSTTQITDSKGEATVGVTDKV AESVKVTAEVQGVQGSNTVNFEPMVYGPVYVSVPEANPTITASDAANGTQVNAYYSGLLA GDQLFVTFYVQATTDDPNSHNYVSPVYTTTAADAASKSNTVILTVPASALQGIDSPQGGA RAFTAKVQVTRPSTQSVIVGSAGGTIDTVE Prediction of potential genes in microbial genomes Time: Wed May 18 15:02:58 2011 Seq name: gi|316919464|gb|ADCU01000009.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.9, whole genome shotgun sequence Length of sequence - 105444 bp Number of predicted genes - 72, with homology - 69 Number of transcription units - 47, operones - 15 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1992 1104 ## ESA_00987 hypothetical protein - Prom 2022 - 2081 6.0 2 2 Tu 1 . - CDS 3121 - 3444 510 ## COG2926 Uncharacterized protein conserved in bacteria - Prom 3532 - 3591 3.6 - Term 3635 - 3666 2.5 3 3 Tu 1 . - CDS 3694 - 5106 1569 ## COG0362 6-phosphogluconate dehydrogenase - Prom 5258 - 5317 9.4 - Term 5267 - 5303 4.5 4 4 Op 1 8/0.000 - CDS 5323 - 6333 408 ## COG0451 Nucleoside-diphosphate-sugar epimerases 5 4 Op 2 4/0.182 - CDS 6404 - 7570 816 ## COG1004 Predicted UDP-glucose 6-dehydrogenase - Prom 7607 - 7666 5.0 6 5 Op 1 . - CDS 7710 - 8609 588 ## COG1210 UDP-glucose pyrophosphorylase 7 5 Op 2 . - CDS 8637 - 9158 266 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 8 5 Op 3 . - CDS 9180 - 10067 352 ## RB2501_13394 glycosyltransferase - Prom 10118 - 10177 11.6 9 6 Tu 1 . - CDS 11071 - 11595 27 ## - Prom 11615 - 11674 6.1 10 7 Tu 1 . - CDS 12319 - 13200 -13 ## COG1216 Predicted glycosyltransferases 11 8 Tu 1 . - CDS 13985 - 14383 102 ## gi|283832543|ref|ZP_06352284.1| hypothetical protein CIT292_06489 - Prom 14487 - 14546 5.7 - Term 14430 - 14490 -0.1 12 9 Tu 1 . - CDS 14611 - 15399 -26 ## Ctha_2069 glycosyltransferase - Prom 15577 - 15636 5.4 13 10 Tu 1 . - CDS 16208 - 16669 -100 ## - Prom 16781 - 16840 8.9 - Term 17305 - 17341 -0.8 14 11 Op 1 11/0.000 - CDS 17347 - 18237 785 ## COG1209 dTDP-glucose pyrophosphorylase 15 11 Op 2 . - CDS 18298 - 19197 345 ## COG1091 dTDP-4-dehydrorhamnose reductase - Prom 19226 - 19285 1.7 + Prom 19688 - 19747 4.8 16 12 Tu 1 . + CDS 19813 - 21396 1210 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 21433 - 21461 2.1 - Term 21407 - 21458 9.2 17 13 Tu 1 . - CDS 21477 - 22835 1321 ## COG3069 C4-dicarboxylate transporter - Prom 23057 - 23116 5.5 - Term 23080 - 23119 7.8 18 14 Op 1 4/0.182 - CDS 23142 - 25010 1533 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis - Term 25022 - 25060 -0.7 19 14 Op 2 4/0.182 - CDS 25107 - 25688 614 ## COG0717 Deoxycytidine deaminase - Term 26069 - 26097 1.0 20 15 Tu 1 . - CDS 26123 - 26764 605 ## COG0572 Uridine kinase - Prom 26839 - 26898 2.3 21 16 Tu 1 . - CDS 26968 - 28098 926 ## COG0489 ATPases involved in chromosome partitioning - Prom 28164 - 28223 3.6 + Prom 28089 - 28148 3.1 22 17 Tu 1 . + CDS 28356 - 30410 1961 ## COG0143 Methionyl-tRNA synthetase + Term 30422 - 30460 6.2 - Term 30416 - 30443 1.5 23 18 Tu 1 1/0.545 - CDS 30477 - 32453 1797 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Prom 32477 - 32536 3.7 24 19 Op 1 35/0.000 - CDS 32646 - 33434 675 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 25 19 Op 2 33/0.000 - CDS 33431 - 34513 1129 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 26 19 Op 3 1/0.545 - CDS 34571 - 35716 1301 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 35749 - 35808 6.2 - Term 35905 - 35935 3.0 27 20 Tu 1 . - CDS 35959 - 37443 1635 ## COG0833 Amino acid transporters - Prom 37477 - 37536 7.7 - Term 37619 - 37654 2.1 28 21 Tu 1 . - CDS 37661 - 38524 657 ## COG0583 Transcriptional regulator - Prom 38629 - 38688 3.4 + Prom 38171 - 38230 3.2 29 22 Tu 1 . + CDS 38450 - 38677 89 ## + Term 38787 - 38838 -0.0 30 23 Tu 1 . - CDS 38843 - 39283 571 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 39501 - 39560 7.0 + Prom 39829 - 39888 6.9 31 24 Tu 1 . + CDS 39951 - 41039 1037 ## COG2855 Predicted membrane protein + Term 41143 - 41194 6.3 + Prom 41989 - 42048 3.0 32 25 Tu 1 . + CDS 42068 - 42925 877 ## COG0648 Endonuclease IV + Term 42942 - 42985 9.0 - Term 42934 - 42968 5.0 33 26 Op 1 19/0.000 - CDS 42994 - 44685 1823 ## COG1299 Phosphotransferase system, fructose-specific IIC component 34 26 Op 2 11/0.000 - CDS 44700 - 45638 824 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 35 26 Op 3 . - CDS 45641 - 46774 1183 ## COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain - Prom 46883 - 46942 5.3 + Prom 46888 - 46947 6.2 36 27 Tu 1 . + CDS 47035 - 47469 395 ## COG1051 ADP-ribose pyrophosphatase + Term 47504 - 47549 4.2 + Prom 47789 - 47848 5.3 37 28 Op 1 31/0.000 + CDS 47904 - 48647 892 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Prom 48702 - 48761 4.6 38 28 Op 2 34/0.000 + CDS 48875 - 49543 785 ## COG0765 ABC-type amino acid transport system, permease component 39 28 Op 3 3/0.364 + CDS 49540 - 50262 600 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 50282 - 50318 5.4 + Prom 50384 - 50443 4.8 40 29 Tu 1 . + CDS 50512 - 52755 1646 ## COG0668 Small-conductance mechanosensitive channel + Term 52794 - 52834 2.2 - Term 52751 - 52795 7.0 41 30 Tu 1 . - CDS 52816 - 53763 930 ## COG3129 Predicted SAM-dependent methyltransferase - Prom 53852 - 53911 6.1 + Prom 53791 - 53850 3.6 42 31 Tu 1 . + CDS 53938 - 54579 320 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family + Term 54820 - 54858 -0.4 + Prom 54682 - 54741 8.1 43 32 Tu 1 . + CDS 54967 - 56451 1350 ## COG2200 FOG: EAL domain + Prom 56502 - 56561 6.4 44 33 Op 1 11/0.000 + CDS 56702 - 58528 1205 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 45 33 Op 2 11/0.000 + CDS 58539 - 59636 1029 ## COG4174 ABC-type uncharacterized transport system, permease component 46 33 Op 3 11/0.000 + CDS 59636 - 60658 798 ## COG4239 ABC-type uncharacterized transport system, permease component 47 33 Op 4 . + CDS 60660 - 62273 794 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Term 62313 - 62349 -0.8 48 34 Tu 1 . - CDS 62400 - 62780 312 ## Pecwa_1912 hypothetical protein - Prom 62894 - 62953 3.4 49 35 Op 1 8/0.000 - CDS 63966 - 65174 1026 ## COG0477 Permeases of the major facilitator superfamily - Prom 65195 - 65254 3.2 50 35 Op 2 . - CDS 65265 - 65987 822 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 66087 - 66146 6.3 + Prom 66200 - 66259 3.2 51 36 Op 1 . + CDS 66284 - 66523 240 ## Dd703_2353 hypothetical protein 52 36 Op 2 5/0.091 + CDS 66548 - 68308 1269 ## COG1061 DNA or RNA helicases of superfamily II + Term 68401 - 68443 0.2 + Prom 68313 - 68372 5.7 53 37 Tu 1 . + CDS 68454 - 68738 370 ## PROTEIN SUPPORTED gi|188533402|ref|YP_001907199.1| 50S ribosomal subunit protein L25 + Term 68777 - 68818 9.7 - Term 68772 - 68799 1.5 54 38 Tu 1 . - CDS 68830 - 69837 1155 ## COG3081 Nucleoid-associated protein - Prom 69956 - 70015 4.1 + Prom 69905 - 69964 5.6 55 39 Op 1 8/0.000 + CDS 70048 - 70275 228 ## COG3082 Uncharacterized protein conserved in bacteria 56 39 Op 2 . + CDS 70306 - 72090 1419 ## COG3083 Predicted hydrolase of alkaline phosphatase superfamily + Term 72253 - 72293 7.6 + TRNA 72165 - 72241 78.0 # Pro GGG 0 0 + Prom 72987 - 73046 6.1 57 40 Tu 1 . + CDS 73097 - 74104 369 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases + Term 74120 - 74176 2.3 + Prom 74416 - 74475 8.5 58 41 Op 1 . + CDS 74588 - 75343 30 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 75388 - 75447 6.1 59 41 Op 2 . + CDS 75481 - 75801 297 ## ETAE_2870 acid-resistance protein + Term 75831 - 75871 9.2 - Term 76757 - 76787 3.0 60 42 Tu 1 . - CDS 76813 - 78210 1485 ## COG0513 Superfamily II DNA and RNA helicases - Prom 78339 - 78398 4.8 - Term 78457 - 78501 0.2 61 43 Op 1 13/0.000 - CDS 78563 - 79717 972 ## COG0845 Membrane-fusion protein 62 43 Op 2 3/0.364 - CDS 79744 - 81888 249 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 63 43 Op 3 . - CDS 81919 - 83280 1078 ## COG1538 Outer membrane protein - Prom 83378 - 83437 1.6 64 44 Tu 1 . - CDS 83567 - 95800 9149 ## Ctu_32110 hypothetical protein - Prom 95897 - 95956 4.6 + Prom 96048 - 96107 9.3 65 45 Op 1 15/0.000 + CDS 96297 - 97034 358 ## COG1309 Transcriptional regulator 66 45 Op 2 10/0.000 + CDS 97027 - 98025 972 ## COG0845 Membrane-fusion protein 67 45 Op 3 45/0.000 + CDS 98037 - 99773 330 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 68 45 Op 4 22/0.000 + CDS 99770 - 100915 1086 ## COG0842 ABC-type multidrug transport system, permease component 69 45 Op 5 . + CDS 100925 - 102049 821 ## COG0842 ABC-type multidrug transport system, permease component + Prom 102059 - 102118 4.6 70 46 Op 1 12/0.000 + CDS 102151 - 104856 1699 ## COG0642 Signal transduction histidine kinase 71 46 Op 2 . + CDS 104849 - 104998 119 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 72 47 Tu 1 . - CDS 105082 - 105297 68 ## SbBS512_E3230 putative IS1 encoded protein Predicted protein(s) >gi|316919464|gb|ADCU01000009.1| GENE 1 3 - 1992 1104 663 aa, chain - ## HITS:1 COG:no KEGG:ESA_00987 NR:ns ## KEGG: ESA_00987 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 56 658 77 677 1027 550 51.0 1e-155 MQSDDSSYFFFFIFALPATSSEVADLQVMQPDSLNVISSQVGSTLAEVSQHGVAESAQST AGSFVTNEMQSWLSQFGTASIELNVDNSGDWGNSAFDFLTPLYDSQQSMLFTQVGLRAPD GRTTGNMGMGVRTFYHENWMFGGNVFFDDDFTGKNRRIGVGAEAWTDDLKLSANTYIGTT EWHQSRDFDDYNEKPADGFDLRVEGYLPAYPQLGAKLMYEQYYGDDVALFDKDNLQSNPS AMTTGINYTPIPLISMGIDYKRGQSAMSDTQFNLNLRYDIGRAWRDQISPAQVGAQRSLA GSRYDLVERNNTIVLAYQKKAPAQILSDLRLNASKNNSPADGVSTDELSAQAIMSDGSPA SGVNVHWSVSADAQLAASNSVTDSQGIANVGVTSKKAQQVLVQASVDTLSRSTSVMFSQS VNSVNLLLVKDNSKPDGTDENTGELVVKDFDGQAINGAEVKWTVDHGASIVHQQSTTDSH GKAVVGFTNVHAGEVRLNATVDAKSSSVLSQFSAASVGQVMTSMLINNQLANNSAEDTAH VVVKDSTGNLMPNVAVAWSLSDSTTAAITQQSTTTDAQGEAHVAVKNSAAGTVTIAATAQ GKSGATVGTFEAIPVASVNVSMLINNQLANNSAEDTAHVVVKDSVGNLMPNVAVVWSLSD STT >gi|316919464|gb|ADCU01000009.1| GENE 2 3121 - 3444 510 107 aa, chain - ## HITS:1 COG:YPO1560 KEGG:ns NR:ns ## COG: YPO1560 COG2926 # Protein_GI_number: 16121831 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 103 1 103 105 147 90.0 7e-36 MENVNKPTFQNVLEFVRMFRRKNKLQREIVDNEKKIRDNQKRVLLLDNLSEYIKPGMSVE AIQAIIADMRGNYEDRVDDYIIKNADLSKERRELSKKLKALGEGESK >gi|316919464|gb|ADCU01000009.1| GENE 3 3694 - 5106 1569 470 aa, chain - ## HITS:1 COG:YPO1541 KEGG:ns NR:ns ## COG: YPO1541 COG0362 # Protein_GI_number: 16121814 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Yersinia pestis # 1 468 1 468 469 853 90.0 0 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSTDKTDEVVAENPGKNLVPFYTVQEF VESLEKPRRILLMVKAGEATDKTIDSLKPYLEKGDILIDGGNTFFQDTIRRNRELSAEGF NFIGTGVSGGEEGALKGPSIMPGGQKHAYELVAPILKKIAAVAEDGEACVTYIGSDGAGH YVKMVHNGIEYGDMQLIAEAYSLLKHGLNMSNDELASTFTEWNKGELNSYLIDITKDIFT KKDEDGKYLVDVILDEAANKGTGKWTSQSSLDLGEPLSLITESVFARYISSLKDQRVAAS KVLSGPKAQVFSGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYKWDLNYGEIAKI FRAGCIIRAQFLQKITDAYAQDASIANLLLAPYFKQIADEYQQALRDVVSYAVQNGIPTP TFSAAISYYDSYRSAVLPANLIQAQRDYFGAHTYKRTDKEGVFHTEWLQD >gi|316919464|gb|ADCU01000009.1| GENE 4 5323 - 6333 408 336 aa, chain - ## HITS:1 COG:BH3709 KEGG:ns NR:ns ## COG: BH3709 COG0451 # Protein_GI_number: 15616271 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Bacillus halodurans # 1 333 1 333 343 429 61.0 1e-120 MNILVTGAAGFIGANVCSRLLSNGNSVVGLDNLNDYYDVALKEARLEPLIQNDDFHFLKI DISDSLAIAKLFEEQRFDRVIHLAAQAGVRYSLTNPLSYAQSNLLGHLNILEGCRHTKVK HLVYASSSSVYGLNGKTPFSTSDSVDHPISLYAATKKSNELMAHSYSHLYGIPTTGLRFF TVYGPWGRPDMALFKFTKNILAGEPIDIYNNGEMQRDFTYIDDIVEGIIRISDVIPQVNN EWTVETGSPATSSAPYRVYNLGNGSPVKLMDYITSLEKSLGIEAIKNFMPMQPGDVYRTY ADTQDLFAATGYKPKVGVDEGVKAFVDWYRDFYQHL >gi|316919464|gb|ADCU01000009.1| GENE 5 6404 - 7570 816 388 aa, chain - ## HITS:1 COG:ECs2829 KEGG:ns NR:ns ## COG: ECs2829 COG1004 # Protein_GI_number: 15832083 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Escherichia coli O157:H7 # 1 388 1 388 388 621 80.0 1e-178 MKIAISGTGYVGLSNGILIAQNHEVVALDIIESKVNLLNQKKSPIVDKEIEEYLAHKPLN FRATIDKEDAYQGADFVIIATPTDYDPKTNYFNTSSVESVIKDVMAINPNAVMVIKSTVP VGYTQKIREELGVVNIFFSPEFLREGRALYDNLHPSRIVIGERSERAEKFAALLVEGAIK EDIKVLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAEALGLNTRQIIDGVCLDPRIGS HYNNPSFGYGGYCLPKDTKQLLANYSSVPNNLISAIVDANRTRKDFIADSILSKNPKVVG IYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVVIYEPVMEDAEFFNSKVIRDLDGFKQMS DVIISNRMSEHLSDVEHKVYTRDLFGND >gi|316919464|gb|ADCU01000009.1| GENE 6 7710 - 8609 588 299 aa, chain - ## HITS:1 COG:YPO1540 KEGG:ns NR:ns ## COG: YPO1540 COG1210 # Protein_GI_number: 16121813 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Yersinia pestis # 1 294 1 294 297 394 66.0 1e-109 MTNLKAVIPVAGLGMKMLPATKAIPKELLPIVDIPLIQKIVNECVAAGIKEIVLVTNSSK NAIENHFDTSYELEALLEARVKRQLLAEVQSICPKGVTINSVRQHKQLGLGHAILCAKPL VGNNPFVVVLPDILLDESTFNAASENLAAMVARFKETGRSQVLVQSTPIEALSEYSVINC DNEILEPGQTARMTSIVEKPENAEMYNSDLSAVGRYVLSGSIWPILETTGYGAWERIQLS DAIATMLQHLPVEAYRLVGKAYNCGEKLGYAEAFVAYGINHPTQGREFKAWLKEMQKSM >gi|316919464|gb|ADCU01000009.1| GENE 7 8637 - 9158 266 173 aa, chain - ## HITS:1 COG:NMB0081 KEGG:ns NR:ns ## COG: NMB0081 COG1898 # Protein_GI_number: 15676014 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Neisseria meningitidis MC58 # 7 170 17 180 184 213 62.0 2e-55 MKLLGTKIIRPKVFGDSRGFFLETFEKKRYQEMLEIDLDFVQDNHSRSSKNVLRGLHFQT SNPQGKLVRVVRGEVFDVAVDIRPESPTFGQWEGVLLNEENKTQFWIPPGLAHGFVVLSD IADFEYKCTDYYNPANEACLIWNDPDVGISWPVDCPKLSEKDKLGKTLKELFS >gi|316919464|gb|ADCU01000009.1| GENE 8 9180 - 10067 352 295 aa, chain - ## HITS:1 COG:no KEGG:RB2501_13394 NR:ns ## KEGG: RB2501_13394 # Name: not_defined # Def: glycosyltransferase # Organism: R.biformata # Pathway: not_defined # 30 287 1 266 269 202 40.0 8e-51 MHFIFEKMRNIKAKLLPDDVYLKMIFKKHLGYELDLKNPKTLNEKLQWLKLNYKNDMLTI CADKLAVRDYISQTLGSKYLIPLVYKTTCPDDFLNFQFPDFPFIVKANHNSGGVRIYRDK KDVNISQLVAECKLWLKNSHYQKTKEWQYKNIPPTIIVEKLLLDSSGEIPNDIKFSCFNG KVEMIHIDSNKEIEHLRNNYSKNLTPLYIDWPEGYGRNKYIDIFPQFNEVKSLAEKLAKP FPFVRVDFYVVDGCIYFGELTFHPTSGFGRFSPRYYDYKMGSKLDIEMLQVNRKL >gi|316919464|gb|ADCU01000009.1| GENE 9 11071 - 11595 27 174 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLIGAFMSSEYVALYDFAQKILNLALMPVTIINNSVFAKMTKSKDMLFLKKVVLFSFFFT LAYVTLAQPLIPFIAKLLFVANEQSIFLTRVMLISVVIFSISLPLAQNGLIVFGYTSLHL LGMISTTLVYLCVIGIGYYLGCLVQLHFFLYTSLAIYLYEMSYRLLLCRWKKII >gi|316919464|gb|ADCU01000009.1| GENE 10 12319 - 13200 -13 293 aa, chain - ## HITS:1 COG:PA1130 KEGG:ns NR:ns ## COG: PA1130 COG1216 # Protein_GI_number: 15596327 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Pseudomonas aeruginosa # 13 290 9 297 325 78 26.0 2e-14 MLFKQQIEKTCAIVIGFYPDEIALSKMFNELSRVVTRIYFIDNTPDANACYSFELSTCVE IVYLRENCGIAYAQNIGIKKALEENFSYALLLDQDSTVHSELVASLVNSLDILSANYTNI ACIGPRIFDQLEGVIEKSNDEEDFESGYSLTKQIIASGSLLYLPNLVHIGFMDEELFIDA VDHEWCWRACAKGYKVVIDDNVKMRHMIGISRSGFGRWQFIICAPVRHYYQFRNTITLIQ RNYVPTKWKIKKALEILTLPLLFMFFGPQRLTRLKYMTKGIVAGLLKQMGRYH >gi|316919464|gb|ADCU01000009.1| GENE 11 13985 - 14383 102 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|283832543|ref|ZP_06352284.1| ## NR: gi|283832543|ref|ZP_06352284.1| hypothetical protein CIT292_06489 [Citrobacter youngae ATCC 29220] # 6 127 83 205 216 72 36.0 6e-12 MLALKYHDNVLCNVKIPVVHELILKNRDVFDYKLCSASLDIIISAVVERNDIFSKKYISS KLEYDKNDICTGKLAYDLLGKKATEFNSPDWVITDNISDLELIKKSKKSTVVSKRKNINF WAQHGVKVDIII >gi|316919464|gb|ADCU01000009.1| GENE 12 14611 - 15399 -26 262 aa, chain - ## HITS:1 COG:no KEGG:Ctha_2069 NR:ns ## KEGG: Ctha_2069 # Name: not_defined # Def: glycosyltransferase # Organism: C.thalassium # Pathway: not_defined # 7 229 11 232 256 164 41.0 2e-39 MSLKKRVVYTAIFGGYDTLHEPKGLNKDIDFVCFTDDTKLKSKKWKIVLVADNKISSAMQ NRKYKFFPNVYLKDYDESLYIDGNISVCSGVISELFDTYLAENKIAIPPHPERDCIYKEA SKCIDISKGDPLKINLQMKFYKGIGFPSGYGLFENNVILRKHNDPDIVCLMESWFQQLEK FSARDQLSLCFLMWQQNIKCGSIFEGPRYSNRYLKIGYHKTEENLPVFKKIILYIFLNKK RNRILFFISKAIENIKRLSAKS >gi|316919464|gb|ADCU01000009.1| GENE 13 16208 - 16669 -100 153 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLNLVGPIIAKIISVLPYYSDLYLKRFTDSYIIQEGSGAGIIFWIFVAIFIVFYQRKTD SPVLVNLFIVGTLINIVFINYDIFERISFYFIYIRFILIALIMKHVTTKNGVLWVLSYSI LIATVLFSGCEILYDLNKHGVTPYINLLVEESV >gi|316919464|gb|ADCU01000009.1| GENE 14 17347 - 18237 785 296 aa, chain - ## HITS:1 COG:rfbA KEGG:ns NR:ns ## COG: rfbA COG1209 # Protein_GI_number: 16129979 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Escherichia coli K12 # 1 288 1 288 293 528 88.0 1e-150 MTTRKGIVLAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPISTLMLAGIRDILIISTPQD TPRFEQLLGDGSQWGLNLQYKVQESPDGLAQAFILGEEFIGSDNCALVLGDNIFYGHDLQ KQLEAAITKESGATVFAYHVNDPERYGVVEFDDNGKAISLEEKPLEPKSNYAVTGLYFYD NRVVKMAKNLKPSARGELEITDINRIYLEQGDLSVAMMGRGYAWLDTGTHESLIEAANFI QTIETRQGLKVACPEEIAYRKGFIDAEQVKCLAEPLAKNDYGKYLLRMIVASKRYV >gi|316919464|gb|ADCU01000009.1| GENE 15 18298 - 19197 345 299 aa, chain - ## HITS:1 COG:rfbD KEGG:ns NR:ns ## COG: rfbD COG1091 # Protein_GI_number: 16129980 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Escherichia coli K12 # 1 297 1 297 299 455 73.0 1e-128 MNILLFGKNGQVGWELQRSLAPLGNIIAVDHDSSEYCGDFSHPEGVAATVRKIKPDVIVN AAAHTAVDKAESEQEFAQLLNATSVEAIAKEAEILGAWLIHYSTDYVLPGTGNRAWIETD EPSPLNVYGVTKLAGERAIQNQCKKHLIFRTSWVYASKGNNFAKTMLRLGAEREELSIIN DQYGAPTGAELLADCTAHAIKKAISNHDVAGIYHLVASGTTTWFEFANLVFAEARRAGIE LKVNNTLPVPTSSYQTPAKRPLNSRLDTTKFKQVFDLNLPNWDVGVKRMLHELFSASTK >gi|316919464|gb|ADCU01000009.1| GENE 16 19813 - 21396 1210 527 aa, chain + ## HITS:1 COG:YPO1527_2 KEGG:ns NR:ns ## COG: YPO1527_2 COG1253 # Protein_GI_number: 16121800 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Yersinia pestis # 233 527 1 296 296 474 81.0 1e-133 MEWIADPTIWAGLATLVVLEIVLGIDNLVFIAILAEKLPRHQRDKARVVGLLLALVMRLI LLASISWLATLTKPILTLVDHSFSARDLIMLTGGIFLLFKATVELNERLEGKDHENHNQR KGAKFWPVVIQIVVLDAVFSLDSVITAVGMVDHLAVMMAAVCIAISLMLMASKPLTNFVN AHPTIIILCLSFLLMIGFSLVAEGFGYLIPKGYLYAAIGFSVIIEILNQLSQYNRRRFLS SSRPLRERTAEAVLRLLSGKHEEAQLDANTSSLIADNRGEADLFIPQERMMIERVLGMAQ RTVSSIMTSRHDVEQLDLNDPKSKLDELLQKNLHTRIVVTDDDAADEPLGVIHVIDLLKQ QLQGEELDLRSLVKQPLIFPEGVSLLMALEQFRQAQTHFAFVVDEFGSVEGVVTLTDVME TIAGNLPVAGEDIDPRHDIQQNEDGTWTANGYMPLEDLVLYIPLPIDEKREYHTLAGLLM EYLQRIPNVGEQIRIGDYMFEPLEIISHRILKIKITPLAVPEDDYEV >gi|316919464|gb|ADCU01000009.1| GENE 17 21477 - 22835 1321 452 aa, chain - ## HITS:1 COG:STM0627 KEGG:ns NR:ns ## COG: STM0627 COG3069 # Protein_GI_number: 16764004 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Salmonella typhimurium LT2 # 1 449 4 452 461 580 86.0 1e-165 MIELLIGVLVATGVGRYIIKGYSATGVLMVGGILLLIISALMGHQVLPASAKSTGLSATD IVEYIKVLLMSRGGDLGMMIMMLCGFAAYMTHIGANDMVVKLASRPLQYINSPYLLMIAA YFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILAPTSGDVVL AAKASEMPLIDFAFKTTLPISIAAIICMAIAHFFWQRYLDKKENVSHEMLDVSEIKTNAP SFYALLPFTPIIGVLIFDGKWGPELHIITVLVICMLAAAIIEFLRGFDAQKVFVGLEVAY RGMADAFASVVMLLVAAGVFAQGLSTVGFISSLIDLAQSFGTGGIVMMMVLVVITMLAAM TTGSGNAPFYAFVELIPKLSAQMGVNPAYLTIPMLQASNLGRTLSPVSGVVVAVAGMAKI SPFEVVKRTSVPVLVGLVVVIVATEILVPVHL >gi|316919464|gb|ADCU01000009.1| GENE 18 23142 - 25010 1533 622 aa, chain - ## HITS:1 COG:YPO1526 KEGG:ns NR:ns ## COG: YPO1526 COG2982 # Protein_GI_number: 16121799 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Yersinia pestis # 1 622 1 618 618 558 47.0 1e-158 MRRFLTTIVILLVVLAVGMTALVLLVNPNDFRSYMTKEVQQRTGYELQLDGSLRWHVWPR LSILSGRMSLTAPGAAQPVISAENMRLDVGLWPLLSHQLDVKQVMLKGAVIRLTPGSDAQ KPENSPIAPSGSRELSSDVAWKLNIKKVQVRDSLLIWQQDKDDQINMRDINLSIDQDSAR QASIELSSRINRNQRDLNFKLAANVDLSSYPQRYSAVVSNFDYQLSGVGLPTSGIAGMGS ATVSYQQQPQQIDISNLLVTANQSQLQGRIQGAMQENGTSAYKVDLQSAALNLDNLFGWT PPTEGADGSANTAEQATLRSPVTSNPESTAQVGEMAFLRDFTAELKIQANEVIYHGLKLA DFSLAAQNEQGNATLQNISGRLGKGTFQAQGTLAVVDNQPAQVSLTPQIENITLEPVLHA FSQPDALVGDLTLTGKFNGTGMTLVDVMQNWDGHAHISLANARLQGMNIQQLIQQAVIRN HSDVSGKDSYSDYTKVQELKADTVLRNGILRITRFFGSSEILTVGGSGLVNLENQSCDMN LNVRVLEGWNGKDSVVKALQNAVIPLRIYGPWQQLSYSLDADKVLRDQLQQKAKDALNNW LSKHQDKDTKDKKDVERLLNKL >gi|316919464|gb|ADCU01000009.1| GENE 19 25107 - 25688 614 193 aa, chain - ## HITS:1 COG:ECs2872 KEGG:ns NR:ns ## COG: ECs2872 COG0717 # Protein_GI_number: 15832126 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 345 87.0 3e-95 MRLCDRDIEAWLDAGKLTISPRPPVDRINGATVDVRLGNKFRVFRGHTAPYIDLSGPKAE VAEALERVMSDEIILGEEDAFFLHPGELALAVTLESVTLPDNLVGWLDGRSSLARLGLMV HVTAHRIDPGWQGCIVLEFYNSGKLPLALRPGMPIGALSFEPLSGPAARPYNSRQDAKYR DQQGAVASRIDKD >gi|316919464|gb|ADCU01000009.1| GENE 20 26123 - 26764 605 213 aa, chain - ## HITS:1 COG:ECs2873 KEGG:ns NR:ns ## COG: ECs2873 COG0572 # Protein_GI_number: 15832127 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Escherichia coli O157:H7 # 1 213 19 231 231 383 89.0 1e-106 MTDNSHQCVIIGITGASASGKSLIASTLYRELREQVGEEHIGVIPEDCYYKDQTDLTMEE RVKTNYDHPSAMDHSLLFQHLQMLKAGKAVELPQYSYVEHTRKQETIHLEPKKVIILEGI LLLTDARLRNELNFSIFVDTPLDICLMRRIRRDVNERGRSMDSVMAQYQKTVRPMFLQFI EPSKQYADIIVPRGGKNRIAIDILKAKISQFFK >gi|316919464|gb|ADCU01000009.1| GENE 21 26968 - 28098 926 376 aa, chain - ## HITS:1 COG:YPO1523 KEGG:ns NR:ns ## COG: YPO1523 COG0489 # Protein_GI_number: 16121796 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Yersinia pestis # 7 376 1 370 370 612 80.0 1e-175 MTQGAGMSNKSHETSTPEALRTQVGEILAAFTHPTLNHPLSALKALHHCALLDNTLHIEL LMPFAWQSGFAALKDATSAELLRVSGAKAIEWRLAHNIATLKRANDQAGVKGVRNIIAVS SGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPMMLGTPNERPTSPDGQHMAPI MAHGLATNSIGYLVTDDNAMVWRGPMASKALLQLLQDTLWPDLDYLVLDMPPGTGDIQLT LAQNIPVTGAVVVTTPQDIALLDAMKGIVMFEKVHVPVLGVVENMSIHVCSNCGFHEPIF GTGGAEKLAEKYKIRLLGQLPLHISLREDLDRGEPTMACRPDSEFAHIYRQLAANVAAQL YWQGESIPTEIAFRAL >gi|316919464|gb|ADCU01000009.1| GENE 22 28356 - 30410 1961 684 aa, chain + ## HITS:1 COG:YPO1522_1 KEGG:ns NR:ns ## COG: YPO1522_1 COG0143 # Protein_GI_number: 16121795 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Yersinia pestis # 10 574 5 565 565 1050 85.0 0 MASVTSQASARKILVTCALPYANGSIHLGHMLEHIQADVWVRFQRMRGNEVHFICADDAH GTPIMLKAQQLGIEPEQMIAAVSQEHQKDFSDFNISYDNYHSTHSEENRELSSLIYGRLK ENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPK SVVSGATPIMRESEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDITRD APYFGFEIPDAPGKYFYVWLDAPIGYMGSFKNLCEKRSDLSFDEFWRKDSSTELYHFIGK DIVYFHSLFWPAMLEGSNFRKPSNVFVHGYVTVNGAKMSKSRGTFVQARTYLDHLDPDCL RYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFGGKLSEHLADP ALYQTFVNAADEIAQAYENRESGKAIREIMALADLANRYVDEQAPWVVAKEEGRDADLQA ICSMGINLFRVLMTYLKPVLPSLSERTETFLNTELTWDGIAQPLLGHQVNAFKALFNRIE MAKVEAMIEDGKAAAAAAVAASKPATGPLADEPIQDTITFDDFAKVDMRIAEIKSAEFVE GSDKLLKLMLDLGGQTRQVFSGIRSAYPDPSVLVGRLTVMVANLAPRKMRFGMSEGMVMA AGPGGKDIFLLSPDSGAQPGHQVK >gi|316919464|gb|ADCU01000009.1| GENE 23 30477 - 32453 1797 658 aa, chain - ## HITS:1 COG:ECs3047 KEGG:ns NR:ns ## COG: ECs3047 COG4771 # Protein_GI_number: 15832301 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Escherichia coli O157:H7 # 10 658 3 659 659 936 70.0 0 MEIDQMAKAKLNPLANLLRGGLCVPLFIAAPVMAAEGDDVMVVTASATEQNLKDAPASIS VITREDLAKKPIQNLKDILQEVPGVQLTNEGDNRKGVSIRGLDSSYTLILVDGKRVSSRT AVFRHNDYDLSWVPAEAIERIEVVRGPMSSLYGSDALGGVVNIITRKVGKEWHGSLSADS TIQEHRDRGDSYNGSFYTSGPLIEDVLGVKVFGNLGKREKDDAQKSTTSKTGESGRIEGY TTRDANVEFAWTPEANQDMTFGYGFDRQDRDSDSLDKNRLERQNYSIGHNGRWDLANTEI RAYGEKIDNYNENRITAKNNAIDGKVVVPLGDFNQLFTLGGEYRNDKLSDAGNLKNGGST SANQYALFVEDEWRIFEPLAFTGGVRMDNHEDYGVHWSPRAYLVYSATDTVTVKGGWATA FKAPSLLELSPDWQSASCRGACTIVGSKDLDPETSESFELGLYYAGDEGMLDGVNASVTV FQNNVKDMINVNRTSDVSVAPTYPNFVGFDKNGKPIFSYYNVDKARIKGVETELKVPFTD ELSISMNYTYNDARDLTNDRPLSTQPFHTANSTLDWKPVEDWAFYVSANYSGKRRVVSSS DKASGGYTLWNTGGSYQMTKDLKLRAGVLNVLDKDLNRDDYSYNEEGRRYFIAADYTF >gi|316919464|gb|ADCU01000009.1| GENE 24 32646 - 33434 675 262 aa, chain - ## HITS:1 COG:YPO1312 KEGG:ns NR:ns ## COG: YPO1312 COG1120 # Protein_GI_number: 16121594 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Yersinia pestis # 1 262 1 262 262 400 80.0 1e-112 MISGLEISHFNAGYPRRAVIEDLSVSTLPRGKITVLLGPNGCGKSTLLRSLAGLNRATGK LLLDGNDLMAQPFSERAKQVVYLPQSLPAGVHLHVLESIIVAQRASGGMGHKGNEGEVMR LLEQLGISHLALSYLDQLSGGQKQLVGLAQSLIRQPSLLLLDEPLSALDLNYQFHVMDLV RRETQRRNIVTVVVVHDINIALRHGDHVLMLENGKLIADGKPVEVITPESLARVYGVRGR IEHCSQGMPQVVIDGLVAEPTI >gi|316919464|gb|ADCU01000009.1| GENE 25 33431 - 34513 1129 360 aa, chain - ## HITS:1 COG:YPO1311 KEGG:ns NR:ns ## COG: YPO1311 COG0609 # Protein_GI_number: 16121593 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Yersinia pestis # 1 360 1 360 360 481 86.0 1e-136 MSASTEPMTAVKRHDASAVKGHYQHIVRHRLVIMGVIVLAILASLILDFTMGPSGLSLST LWQTLWQPEMADAGTRVIVWDIRLPYALMAIVVGLALGLAGAEMQTILNNPLASPFTLGV SSAAAFGAALAIVLGIGFPGIPDQWFISANAFIFALFAALMLDGITRWTRVATSGVVLFG IALVFTFNALVSMMQFIATEDTLQGLVFWTMGSLARASWEKLGILLLAFAILMPISMMSS WKLTALRLGEDRAVSFGIDVKRLRLGTLLRISILSALAVAFVGPIGFIGLVAPHIARLIF GEDHRFYLPASALIGALVLSMASVASKNLIPGVIIPVGIVTSLVGVPFFLSIILRHRGNV >gi|316919464|gb|ADCU01000009.1| GENE 26 34571 - 35716 1301 381 aa, chain - ## HITS:1 COG:YPO1310 KEGG:ns NR:ns ## COG: YPO1310 COG0614 # Protein_GI_number: 16121592 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Yersinia pestis # 14 377 14 377 381 582 76.0 1e-166 MKDTVKGRKSRWGIQLLAAATLLGSMSSWAATVTDIAGRSVEVPAKVDRILLGEGRLFYA VSLLEGQKPFDRIVGWQGDFRKLDPQTYAVYQAKFPEIDKIPLIGNTTADSVSPEKVLTL NPDVAIFGLSGHGPGRDSQLVKQLEKAGVPVVFVDFRTSPLKNTLPSMRLLGQVLHREQQ AENYINFYQDNVRLVTDITSKIPDSQKPKVFIELKAATSDDCCGTAGNGNMGDFIDLAGG NNIAKGLLPGALGQINLEKVLSADPDVYIASGAKAPNAKDPGIKLGAQVDEQQARDSLNL AMQRTGISTLKAVKEGNSHAIWHSYYNSPYNVLAVQAFAKWIYPEKFASLDPKKTMDSMY QQFLAVDPSGTYWVDAKASNQ >gi|316919464|gb|ADCU01000009.1| GENE 27 35959 - 37443 1635 494 aa, chain - ## HITS:1 COG:YPO1309 KEGG:ns NR:ns ## COG: YPO1309 COG0833 # Protein_GI_number: 16121591 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Yersinia pestis # 1 488 1 488 503 828 89.0 0 MAQTNTKTSSTGRAPALRRELKARHLSMIAIGGSIGTGLFVASGATVSQAGPGGALLSYI IIGLMVYFLMTSLGELAAFMPVSGSFSTYGSRYVEEGFGFALGWNYWYNWAVTIAVDLVA AQLVMGYWFPDTPGWIWSALFLGLMFLLNYISVKGFGEAEYWFSLIKVTTVIIFIIVGVA MIVGILKGGEHAGFHNWTIGDAPFAGGFASMIGVAMIVGFSFQGTELIGIAAGESKDPGK NIPMAIRQVFWRILLFYVLAILIISLIIPYTDPNLLRNDVKDISVSPFTLVFQNAGLLSA AAVMNAVILTAVLSAGNSGMYASTRMLFTLASEGKAPRIFAKLSAGGVPRNALYATTVVA GLCFLTSMFGNQEVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVKKGLDLNALPYLSGF FPVGPIFAFVLCLIITLGQNYEAFLDDRIDWYGVTATYIGLPLFLIIWFGYKLVKGTHFV SYSEMEFPITKIDD >gi|316919464|gb|ADCU01000009.1| GENE 28 37661 - 38524 657 287 aa, chain - ## HITS:1 COG:YPO1308 KEGG:ns NR:ns ## COG: YPO1308 COG0583 # Protein_GI_number: 16121590 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 286 1 286 290 430 77.0 1e-120 MHITLRQLEVFTEVLKSGSTTQASHMLSLSQSAVSAALSDLETQLSVRLFDRVGKRLVVN EHGRLLYPKAMALLEQAGEIEHLFQSEAGALRIAASSTIGNYILPKMIANYRRDFPVAPL ELNVGNSRDVINAVADFRVDLGLIEGPCHMPDLLTHTWQQDELVVFAAPDHPLLQMPITL ESLAQAPWILRESGSGTREVVEHILLSHLPHFDLVMELGNSEAIKHAVRYGIGISCLSRR VIEEQLQTGVLVEVPVPLPRLNRALYLIHHRQKHISKALERFLSYCD >gi|316919464|gb|ADCU01000009.1| GENE 29 38450 - 38677 89 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRSLSGGTALQYFSKYFQLAQSNMHKRDPKKSQYIYKRYALNQPKSHEISSVAGLGGREM QGSITRISLFIADLT >gi|316919464|gb|ADCU01000009.1| GENE 30 38843 - 39283 571 146 aa, chain - ## HITS:1 COG:STM1652 KEGG:ns NR:ns ## COG: STM1652 COG0589 # Protein_GI_number: 16764996 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Salmonella typhimurium LT2 # 6 146 3 144 144 100 41.0 1e-21 MDYAYKMILVPIDIEEPKLTEGALNHAAYLAKMSQAKIRLMNVRPSIPTYYMGEHPQQLI KIQDDATNKVQKELEALASTLDVSADQVSVVVTWGSIYDEILKEAEVCGADLIVVGSRRP TMSTYLIGSNAARVVRHAKTSVLVVR >gi|316919464|gb|ADCU01000009.1| GENE 31 39951 - 41039 1037 362 aa, chain + ## HITS:1 COG:YPO1307 KEGG:ns NR:ns ## COG: YPO1307 COG2855 # Protein_GI_number: 16121589 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 3 358 2 356 362 395 68.0 1e-110 MHANSAFEHKNSPRYLHALGNLLPGLLLAGVITAVAMWAGNIPWVENLGFGALTLAIIFG IILGNTLYPRIEGACAVGVHLSKQKLLRLGIILYGFRLTFQQIADVGMTGIVTDAITLTS TFLLAMWVGRKVFGMDSQTVMLIGAGSSICGAAAVMATEPVVKADASKVAVAVSTVVIFG TIAIFFYPWLYQLNEHYQWLQTTQEGFGIYIGSTIHEVAQVVAAGRAISDEAGNAAVITK MIRVMMLAPFLVILSSFIARSMPSNKQNATKQKSAITIPWFAVLFIVVAGFNSFDLLPVE LVHQLITLDTILLAMAMAALGLTTHISAIRQAGIKPILLASILFVWLVVGGALINHFVGM WV >gi|316919464|gb|ADCU01000009.1| GENE 32 42068 - 42925 877 285 aa, chain + ## HITS:1 COG:YPO1306 KEGG:ns NR:ns ## COG: YPO1306 COG0648 # Protein_GI_number: 16121588 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Yersinia pestis # 1 282 1 282 285 489 84.0 1e-138 MKFVGAHVSASGGVDQAVIRAHELEATAFALFTKNQRQWKAAPLTAEVIDKFKSACAQYH YQPEQILPHDSYLINLGHPVEEALEKSREAFIDELERCSELGLTLLNFHPGSHLMQIDED KCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFRFEHLAAIIDGVEDKSRVGVCIDT CHAFAAGYDLRTEEECSKTFANFERIVGFNYLRGMHLNDAKSAFDSRVDRHHSLGEGNIG KTAFSWIMRDPRFDGIPLILETVNPDIWAEEIVWLKSQEVAENAA >gi|316919464|gb|ADCU01000009.1| GENE 33 42994 - 44685 1823 563 aa, chain - ## HITS:1 COG:YPO1300_3 KEGG:ns NR:ns ## COG: YPO1300_3 COG1299 # Protein_GI_number: 16121582 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Yersinia pestis # 224 559 1 336 338 504 89.0 1e-142 MKTLLLTEGAQGQARSYLAKRMLESVAAKLDITLLDAAQDAELIIVIGDEQPQDTAFNGK RLFIGSAEKAIREPEAFLAQAMAEAQSYQYTSATVATPAKGQMRIVAVTACPTGVAHTFM AAEAIEAEAKKRGWWVKVETRGSVGAGNEITPEEVAAADLVIVAADIEVDLNKFSGKPMY RTTTGLALKKTAQELDKALVESETFTAQKSSSTASSSKKKEAVGAYRHLLTGVSYMLPMV VAGGLCIALSFVFGIEAFKQEGTLAAALMQIGGGSAFALMVPVLAGYIAFSIADRPGLTP GLIGGMLAVSTGAGFLGGIIAGFLAGYVAKLISTKLHLPQSMEALKPILIIPLIASLITG LAMIYIVGKPVAAIMEGLTHWLQAMGTANAVILGAILGAMMCTDMGGPVNKAAYAFGVAL LSTQTYAPMAAIMAAGMVPPLAMGFATLVARNKFAQSEREGGKAALVLGLCFISEGAIPF AARDPMRVLPCCIAGGALTGALSMFFGAKLMAPHGGLFVLLIPGAITPVIQYLIAIVAGT LLAGGLYALLKRPDVEIAEEKLA >gi|316919464|gb|ADCU01000009.1| GENE 34 44700 - 45638 824 312 aa, chain - ## HITS:1 COG:YPO1299 KEGG:ns NR:ns ## COG: YPO1299 COG1105 # Protein_GI_number: 16121581 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Yersinia pestis # 1 312 1 312 312 567 92.0 1e-162 MSRRVATITLNPAYDLVGYCAEIERGEVNRVQTAGLHAAGKGINVAKVLKDLGIDVTVGG FLGKENQDGFQQLFSELGIANRFQVVAGRTRINVKLTEKDGEVSDFNFSGFEVTKPDWER FVNDSLSWLGQFDMVCVSGSLPAGVDPDDFTDWMRRLRSQCPCIIFDSSREALVAGLKAA PWLVKPNRRELEIWAGRELPTLDDVVGAAHALRDQGIAHVVISLGAEGALWVNASGAWLA KPPACEVVSTVGAGDSMVGGLIYGLMMRESSEHTLRLATAVAALAVSQSNVGIADRTQLA AMMARVDLKPFN >gi|316919464|gb|ADCU01000009.1| GENE 35 45641 - 46774 1183 377 aa, chain - ## HITS:1 COG:YPO1298_1 KEGG:ns NR:ns ## COG: YPO1298_1 COG4668 # Protein_GI_number: 16121580 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol/fructose-specific phosphotransferase system, IIA domain # Organism: Yersinia pestis # 1 255 1 255 280 332 71.0 9e-91 MFHLSPQDIHLAASASNKEEAIQQIAAALTQAGYVSEGYVQGMLNREKQTSTYLGSGIAI PHGTTDTRDMVLKTGVKVFQFPQGVEWSEGQRAYVVIGIAARSDEHLALLRQLTHVLSDD SVAQQMAQTTSAEELRSLLMGERSVAVFRFDAGMVTLDINADSLMTLQAINAGRLQQAGA VNAEFVSDVITRQPLNLGQGIWLSDSALGNQASAAAAARPQTPFDVDGEKVGLLLTVAMA DAQPEGMLGYLSTLLQNNQAERLLKATDAAALVALLTSEVAEEDSVLSAEFVLRNEHGLH ARPGTLLVNTIKKFESQITVTNLDGSGVPANGRSLMKVVALGVKKGHRLRFTANGSDAAQ ALEAIGQAINDGLGEGA >gi|316919464|gb|ADCU01000009.1| GENE 36 47035 - 47469 395 144 aa, chain + ## HITS:1 COG:YPO1296 KEGG:ns NR:ns ## COG: YPO1296 COG1051 # Protein_GI_number: 16121579 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Yersinia pestis # 13 138 35 160 173 173 61.0 7e-44 MAVKVGVGVIIANPQGQVLLGKRCGSHAPFWSIPGGHVEEGETFEQAAIREVEEETGLIV TEPRLIGVTNNLATWLDEGVHSVSMIMVATYVRGEPQLREPEKCEQWRWCNPQRMPEPCF EACRNGIHLWLNGEFYLPSAANNA >gi|316919464|gb|ADCU01000009.1| GENE 37 47904 - 48647 892 247 aa, chain + ## HITS:1 COG:STM0830 KEGG:ns NR:ns ## COG: STM0830 COG0834 # Protein_GI_number: 16764192 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 1 247 1 248 248 421 87.0 1e-118 MKSIIKASVAALTLALAMSSHAAEKQLIVATDTAFVPFEFKQGDKYVGFDIDLWDAIAKQ LNLSYTLKPMDFSGIIPGLQTRNVDLALAGISITDERKKAIDFSDGYYNSGLLVMVKKDN NDVKSVKDLDGKVVAVKSGTAGVDYAKANIKTKDLRQFPNIDNAYLELGTGNADAVLHDT PNILYFIKTAGHGQFKAVGDSLEAQQYGIAFPKGSDLREKVNGALKTLRENGTYNEIYKK WFGVEPK >gi|316919464|gb|ADCU01000009.1| GENE 38 48875 - 49543 785 222 aa, chain + ## HITS:1 COG:STM0829 KEGG:ns NR:ns ## COG: STM0829 COG0765 # Protein_GI_number: 16764191 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 222 1 219 219 328 83.0 4e-90 MQFEWSAIWDAFPILLEGAKLTLWISIVGLLGGLVIGLVAGFARAYGGWLSNHIALVFIE LIRGTPIVVQVMFIYFALPMMLQAFMQVRIDPLTAAVVTIMINSGAYIAEITRGAVLSIH NGFREAGLALGLSKRDTLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQG QEIIAGNFRAMEIWSAVAVIYLIITLALSYVLRRLERRLKII >gi|316919464|gb|ADCU01000009.1| GENE 39 49540 - 50262 600 240 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 235 48 6e-61 MIEFKHVDKSFGQTAVLHDINLNINQGEVVVIIGPSGSGKSTLLRCINKLEEISAGQLLV DGMDVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPTRVRHMKKEDAEKRAREL LAKVGLSERADHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLTVMK DLAEEGMTMVIVTHEIGFAQKVASRLIFVDKGRITEDGEPDALISHPPSDRLREFLQHVS >gi|316919464|gb|ADCU01000009.1| GENE 40 50512 - 52755 1646 747 aa, chain + ## HITS:1 COG:ECs0886_2 KEGG:ns NR:ns ## COG: ECs0886_2 COG0668 # Protein_GI_number: 15830140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 435 740 1 308 311 316 54.0 8e-86 MSQGARLIPTFLRYWLFVFALLFSFTGAISSANAADAAKNSDSKAAYTALADILSDASSR DALIAELRDSAKTGKPPTPPLNKETSAPPRSDSFAEQLDTTVQGYLAAAQNKLNNVVTTL KAPPHKAFNPDTFWPALSHFLLTVAVTFAIFLSIRFFATPFYKRIGSWGHKAREKRVDWA RRPTAILSAFIIDLLILLFCITAGNIIAASFGSNSFGHNSPAVMRQQTLFLNAFALIEFF KAVLRLIFAPKFDYLRPFPFSDATAKYWNTRLAWLSGLIGYGLMVVVPITNAQLGTSVGV LVNFCIMLALTVYAIGLILINRTPIQKEITALGNRSLAFFGMFLHALSHVWHLLAIGYFL VLFLLSQFDPGNSLAFMMDATIKSLLVVGCGALVSGLLTRWISRRITLPADMKLKYPMLE RRINSYIPSALQIMRFIVVVAILLFLLDAWHIFNLRSWLDSATGEKIIGGIIHILLIMFI AVLGWTLLASIIEHRLSLEMDNPKHPGARERTLLTLFRNVLSIVITTITVMIILSQIGIN IAPLLAGAGALTLAVSFGAQTLVKDVINGIFIQFENGMNTGEYVTVFGITGTVERMTIRS IGLRDDYGVYHLVPYSSITTVANYAREFGVYRANYVISRDEDIEKANEVLKQAVAELREN PRLKSLLIGEPAFNGVVKLDDISFTLRTTIRTVALQQWTIQYALDKLVKEHFQRAGIKTP HQNVQISYAEQQRKALPPLEGADGITP >gi|316919464|gb|ADCU01000009.1| GENE 41 52816 - 53763 930 315 aa, chain - ## HITS:1 COG:YPO2519 KEGG:ns NR:ns ## COG: YPO2519 COG3129 # Protein_GI_number: 16122739 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Yersinia pestis # 6 311 19 327 336 398 61.0 1e-111 MKNPKKKSFPAQKTNLHPRNLHRERYDFPALCETSPELKAFVARNQWGDDSIDFADPLAV KALNSALLQHFYQIGHWDIPDGYLCPPIPGRADYLHYLADVLASDNGYQVPRGPNVCILD IGVGANCIYPLIGQHEYGWRFTGTEIDPVALKSAGAVIKANPEAAKNIRLRQQQDPAKIL KGAIKAGEHYAATLCNPPFHSSAEEALNGTRRKLTNLGRDASKPVLNFGGKAGELWCEGG EVAFITKMIEESESYAKQVGWFTSLVSRQENLPAIYEALEDVEALDVRTVEMSQGQKVSR FVAWTFLPENKRKIR >gi|316919464|gb|ADCU01000009.1| GENE 42 53938 - 54579 320 213 aa, chain + ## HITS:1 COG:RSc1820 KEGG:ns NR:ns ## COG: RSc1820 COG1853 # Protein_GI_number: 17546539 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Ralstonia solanacearum # 6 208 5 206 207 215 53.0 6e-56 MSSLFEYYSYQPAQGHGLAHDPLNAIIGPRPIGWISSISGDGQHNLAPYSFFNCFSYHPP VIGFASSGWKDSVANINETGEFVWNLATLDNAEAMNQSSASLPHGEDEFVFSGLNMLASR WVKPARVAESPVNFECKLTQCIQLQDQYGQPFDSWLVLGEVIGIHIAENLLDENGIYQTA AANPILRAGGPSAYYSISDENRFDMRRPTINRT >gi|316919464|gb|ADCU01000009.1| GENE 43 54967 - 56451 1350 494 aa, chain + ## HITS:1 COG:rtn_2 KEGG:ns NR:ns ## COG: rtn_2 COG2200 # Protein_GI_number: 16130114 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 235 489 3 257 258 278 51.0 1e-74 MLAGHSLQQQREKQQFELAKTGLMYASHLADDLDQKMVSLLPLTHVLCEEVANTLSSKAV FSGGVRAYILVRNGTAVCSSVTHTMSSPATNIYPDIDLDRDADMILQQGTPLVPDRPVIA FWRSTGDGTRSGVLLTLDINPAPYMLFFSRERTISGLALIIKDRAISTYEPNIITVDELP SNPDVTVQDEKNRFTFRLYGSPLSTSDLGLLGMFSLLVAVIAWLITFYFLSQQRRFDREI LQGIKRDQFYLLYQPVIHAETHLPGGFEALVRWKHPKLGLIPPDEFIPYCESQGLIAQLT QHIMALAARDAHRLIDVVPKGTKLGLNISPLHMTLDGFKNDVLHFINMMPTEYLIPLFEI TERSMVQHGGAEAIFDWLHAQGIEIAIDDFGTGHSALIYLQRYKIDYLKIDRGFVNSIGL ETVTAPVLDAVLELAKKLKLQIVAEGIETEEQAEYLRQRHVNYLQGYLFSRPIPVEQLHD YYRDHVLPKLNAII >gi|316919464|gb|ADCU01000009.1| GENE 44 56702 - 58528 1205 608 aa, chain + ## HITS:1 COG:YPO1273 KEGG:ns NR:ns ## COG: YPO1273 COG4166 # Protein_GI_number: 16121558 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Yersinia pestis # 5 608 2 602 602 899 71.0 0 MHSRFLKTLCTVVPLVAALSFNVRADVINESYAFSILGEPKYSSDFTHFDYVNPAAPKGG DITLSALGTYDNFNSYSSRGHAAVRANQLYDTLFTNSADEIGSYYPLIGESVRYDDQFRW AEVNINADARFQDNTPITAQDVQFSFNKFMTEGVPQYRIYYKGVNVKAISRLTVRFELPT PDKEMMLSLIGGLKVMPESFWKNHKLSEPLSTPPLGSGPYRISDYRLGQFVTYSRVTNYW AANLPVNRGQYNFDTIRYDYYLDDKVALEAFKAGAFDFRIETSPKNWATQYSGGNFAKNY IVKSDETNQSAQDTRWLAFNTKRPIFADRRVREAISLAFDFAWMNKALYYDAYQRTNSYF QNTQYAARSYPDSAELAWLAPLKGKVPAEVFTQIYQPASTDGSGNDRENLLKATTLLEEA GWTVKDQKLVNKTTGKPFVFELLLPSSSNFQYVMPFKHNLEKLGITLNIREVDTSQYTNR IRSRDFDMFPTVYGGMNYPDPSLKILWRSDYIDSTWNSAGVQDPAVDSLIDNIISHQGQP EALLSLGRALDRVLTWNHYMLPMWYSNHDRIAYWDKFSMPALRPAYDLGFDTWWYDVNRA AQLPQQRR >gi|316919464|gb|ADCU01000009.1| GENE 45 58539 - 59636 1029 365 aa, chain + ## HITS:1 COG:YPO1272 KEGG:ns NR:ns ## COG: YPO1272 COG4174 # Protein_GI_number: 16121557 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Yersinia pestis # 1 365 1 366 366 582 83.0 1e-166 MTAYLIRRLLLIIPTLWAIITINFFIVQIAPGGPVDQAIANIEMGQNAGFGSGGGDQIGA ARGGIAASNVGEGQYRGARGLDPQIIAEIEKRFGFDKPLHQRYFDMLWNYVRFDFGDSLF RGGSVMSLVGQSLPVSVSLGLWSTLIIYLVSIPLGIRKAVHNGSRFDTWSSTLIIIGYAI PAFLFAIMLIVLFAGGSYWDWFPLRGLVSSNFSSLPWYSKITDYFWHITLPVLATVIGGF ASLTMLTKNSFLDEVRKQYVVTARAKGLDEQKILYRHVFRNAMLLVIAGFPATFISMFFT GSLLIEVMFSLNGLGLLGYDAILQRDYPVMFGTLYIFTLLGLLLNIISDITYTLVDPRID FEARH >gi|316919464|gb|ADCU01000009.1| GENE 46 59636 - 60658 798 340 aa, chain + ## HITS:1 COG:ECs3071 KEGG:ns NR:ns ## COG: ECs3071 COG4239 # Protein_GI_number: 15832325 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 3 338 4 339 341 518 77.0 1e-147 MTLNPINQARWQRFKANRRGYWSLWIFLIVFIMSLGSELIANDKPLLLRYDQQWYAPFLI NYPETTFGGDFKTATDYQDPLIRSNIEQHGWAVWAPIRYSYNSINFATKVPFPSPPSSQH WLGTDENGNDILAQVLYGLRISILFGLMLTVLSSIIGITVGATQGFYGGKVDLIGQRFIE VWSGMPTLFLIILLSSVVQPNFWWLLAITVIFGWMGLVGVVRAEFLRTRNFDYIRAARAM GVDDRTIMLRHMLPNAMVATLTFLPFILCGAITTLTSLDFLGFGLPTGSPSLGSLLLQGK NNLQAPWLGITAFVVLAALLSLLIFIFEAVRDAFDPSKVN >gi|316919464|gb|ADCU01000009.1| GENE 47 60660 - 62273 794 537 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 9 534 4 521 563 310 35 2e-83 MTEISLSHSQPPLLNIRDLHIHFRHGEVTRPVVSGVSLDINAGETLALVGESGSGKSVTA LSILRLLSSPPAQYPSGDILFNGQSLLHADEALLRSIRGNEIAMIFQEPMVSLNPLHCIE KQLAEVLSLHRGMRRAQARAEIIRCLDRVGIRQPEKRLNDYPHQLSGGERQRIMIAMAIL TRPKLLIADEPTTALDVSVQAQILELLAELKQELNMGMLFITHNLNIVKRLADRVAVMRY GEIVETGECQALFSAPQHPYTQQLLDAIPSGDPVALPQPAQTLLEVKDLSVRFPMRQGIL RRTVGYSHIVDRLNFTLQRGESLGLVGESGSGKSTTGLALLRLIPALGEIWFEGTALHLL NLKQLQPYRSQIQVVFQDPYSALNPRLNVLQIIAEGLQVHQKLNEQQREERVISAMNEVG LDPETRYRYPTEFSGGQRQRIAIARALILEPRLLILDEPTSSLDRSVQAQILTLLKTLQQ RHQLSYLFISHDLQVVRSLCHQVMVMRNGKVIEHGNCAEVFANPTQDYTRQLLAFAD >gi|316919464|gb|ADCU01000009.1| GENE 48 62400 - 62780 312 126 aa, chain - ## HITS:1 COG:no KEGG:Pecwa_1912 NR:ns ## KEGG: Pecwa_1912 # Name: not_defined # Def: hypothetical protein # Organism: P.wasabiae # Pathway: not_defined # 1 126 1 114 114 160 64.0 2e-38 MNSFQLSIVHRLPQSYRWSSGLTGVQVEPIYLEKTAGVENTDVNNSAIESNSLIGLKLLS EEGEAAWQIMKRLNQSLQEMQVNCSVVELDGEPCLFVHLEDESAAMCRLKNVGVAIAEPI IAQYPF >gi|316919464|gb|ADCU01000009.1| GENE 49 63966 - 65174 1026 402 aa, chain - ## HITS:1 COG:YPO1267 KEGG:ns NR:ns ## COG: YPO1267 COG0477 # Protein_GI_number: 16121553 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 397 1 397 399 580 82.0 1e-165 MQTPRSSHLGLILILGLLSMLMPLAIDMYLPSMPVIAEQFGVPSGDVQMTLSAYTLGFAF GQMIYGPMADSIGRKPVIMYGTLFFALAGAACAMAQSVDQLIVMRLIHGLAAAAASVVIN ALMRDMFTKDDFARMMSFVVLVMTIAPLLAPIMGGALLIWFSWHAIFWAMAGAALLGTIL VAIFIKETLPKEKRQKFRLRTTLGNFASLFRHKRVLCYMLASGFSFAGMFSFLSAGPFVY IDLNGVSPQHFGYYFALNIVFLFIMTLINSRNVRRFGAINMLRFGLLVQFVMGIWLVITA ALGLGFWSLVIGVAAYVGCIAMITSNAMAVILDDFPHMAGTASSLAGTLRFSLGAVVGTL LALASARSEWPMVSSMFLCIFAAMMLFLYASRPSKSSRVEPV >gi|316919464|gb|ADCU01000009.1| GENE 50 65265 - 65987 822 240 aa, chain - ## HITS:1 COG:YPO1266 KEGG:ns NR:ns ## COG: YPO1266 COG1187 # Protein_GI_number: 16121552 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Yersinia pestis # 1 233 1 233 235 382 80.0 1e-106 MRLDKFLSQQLGISRALIARELRAKRVTVDGEIVKSGAHKLTPEQEVAFDGQVLEQIHGP RYFMLHKPEGYVCSTDDPDHSTILYFIDEPLAEKLHAAGRLDLDTTGLVLLTDDGQWSHR ITSPKHECDKTYLVTLEHPLADDTAEQFAHGVQLHGEKDLTKPATLEQLDANVVRLTISE GRYHQVKRMFAAVGNRVVELHRERIGAIELDEDLAPGEYRPLTEEEIASVGLPIELQSKD >gi|316919464|gb|ADCU01000009.1| GENE 51 66284 - 66523 240 79 aa, chain + ## HITS:1 COG:no KEGG:Dd703_2353 NR:ns ## KEGG: Dd703_2353 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii # Pathway: not_defined # 1 79 1 79 79 110 70.0 1e-23 MSSIHGHEVLNMMIDSGESFSTASLITAIEQRFGADARFHTCSQQDLTAAQLVDFLASRG KFIPSDNGFNTHSSKICQH >gi|316919464|gb|ADCU01000009.1| GENE 52 66548 - 68308 1269 586 aa, chain + ## HITS:1 COG:YPO1265_1 KEGG:ns NR:ns ## COG: YPO1265_1 COG1061 # Protein_GI_number: 16121551 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Yersinia pestis # 1 358 1 358 358 637 84.0 0 MAFTLRPYQREAVDATIAHFRKHQEPAVIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE LVAQNHSKYCAYGLDADIFSAGLQQKESSGKVVFGSVQSVARNLPLFDGEFSLLIVDECH RISDSDDSQYQQILQHLRSNNPNLRLLGLTATPYRLGKGWIYQYHYHGITRGDSNSLFRD CIYELPLRYMIKNQFLVPPERLDMPVVQYDFSRLEPNSNGLFRETDLNRELKDQQRITPH IVSQIMEFADTRKGVMIFASTVEHAREIHGLLPPEQAALVSAETPGDERDAIINAFKRQE LLYLVNVAVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLSPGKTDCLILDYAGNP HDLFTPEVGTTKPHSDSQPVQVFCPGCGFANTFWGKTTENGDIIEHYGRRCQGWLEDDEG GREQCDYRFRFKTCPHCGAENDIAARRCHQCHQVLVDPDDMLKEALKLKDALVLRCGGMQ LQHGEDDKGEWLSITYYDEDGADVSERFRLKTPAQRTAFMQLFLRPHLRAPGIELVWKRA ADIVAQQEKLRYPDFVVARMKGRFWQIREKVFDYQGRYRKADSLRG >gi|316919464|gb|ADCU01000009.1| GENE 53 68454 - 68738 370 94 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|188533402|ref|YP_001907199.1| 50S ribosomal subunit protein L25 [Erwinia tasmaniensis Et1/99] # 1 94 1 94 94 147 71 3e-34 MFTIEATARKEQGKGASRRLRTSGKFPAIVYGGNQEPVAVEIDHDTTWNMQEKEGFYEQV IALMIDGKETKVKVQAVQRHPFKRKLTHVDFVRA >gi|316919464|gb|ADCU01000009.1| GENE 54 68830 - 69837 1155 335 aa, chain - ## HITS:1 COG:YPO1262 KEGG:ns NR:ns ## COG: YPO1262 COG3081 # Protein_GI_number: 16121548 # Func_class: R General function prediction only # Function: Nucleoid-associated protein # Organism: Yersinia pestis # 1 331 1 331 334 553 84.0 1e-157 MSLDLEQIALHQLVKRDEQQLDVVLRDSLLAKNAAVEEMMAELHRVYSAKSKAYGTFSEE SELAEALRNYRRGNEDFLAFSRAATGRLRDELAKYPFADGGVVLFCQYRYLAVEYLLIAV LNSCSSMRVNEELDISSTHYLDIMRADIVARIDLTEWETNPESHRYLTFLKGRVGRKVSD FFMDFLAASEGLDAKAQNRGLLQAVDDYCAEGQLDKNERQAYRQQVYSYCNGQLQAGEEI ELEALAKEIPPVGEKDFQQFTAEQGYDLEESFPADRSTLRQLTKMAGSGGGLTINFDAML LGERIFWDPATDTLTIKGTPPNLRDQLQRRSSGGN >gi|316919464|gb|ADCU01000009.1| GENE 55 70048 - 70275 228 75 aa, chain + ## HITS:1 COG:YPO1261 KEGG:ns NR:ns ## COG: YPO1261 COG3082 # Protein_GI_number: 16121547 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 75 1 75 75 110 88.0 6e-25 MPQSSRYSDEHVEQLLSELANVLESHHTPNDLSLMVLGNMVTNLINTSIAPAQRHAIARS FAEALQASIREDKAH >gi|316919464|gb|ADCU01000009.1| GENE 56 70306 - 72090 1419 594 aa, chain + ## HITS:1 COG:YPO1260 KEGG:ns NR:ns ## COG: YPO1260 COG3083 # Protein_GI_number: 16121546 # Func_class: R General function prediction only # Function: Predicted hydrolase of alkaline phosphatase superfamily # Organism: Yersinia pestis # 1 594 1 598 598 867 70.0 0 MVTNRQRYREKVSQMISWGHWFALFNILLGLLLGSRYLFVADWPSSLFGRVYAVISWLGH FSFVGFSAYLLIIFPLTFVVMSQRLLRFISAALATTGLTLLLVDSEVFTRFHLHLNPVVW ELVVNPDQGELARDWQLMFICVPVIFLVEMLFGTWSWQKLRSLNRQKFGKPLAGLFITAF LASHLIYIWADANFYRPITMQRSNLPLSYPMTARRFLEKHGLLDAQEFQNRLNQTGSPEA VSVEYPLSKLSFADKGTGYNLLVIAVDGLRADDIKQDLPQLAAFGDENLDFTQHYSSGNN LDNGLFGLFYGISPSYLEGILAGRKPSALINALSQQHYQFGLFSSDGFSAPLYRQALLTD FSLPAPIRQSDADTTKQWQQWLATQTTQSPWFSYVNLNGTRSALAGSSGHKPEDFMAKYQ KAASGVDAQIATILDTLKQRGELDKTVVVITASHGIEFNDSGKGDWGFGTNYSRYQLQVP LIIHWPGTPAQTINKLTSHADVMATLMQRLLHVDTRAVNYTQGEDLFAPSRKHNWLALGD SDELVIVTPKETIILDKNGRYRTYDADNEEMKGEKPQLALLLQVLTDVKRFIAN >gi|316919464|gb|ADCU01000009.1| GENE 57 73097 - 74104 369 335 aa, chain + ## HITS:1 COG:ECs4504 KEGG:ns NR:ns ## COG: ECs4504 COG1442 # Protein_GI_number: 15833758 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Escherichia coli O157:H7 # 17 333 5 335 335 144 34.0 2e-34 MANFYYMDTDKNFNHENDSLFKKNTIKTSNNNLKVLNIAFCFDDNFVMPTGVAIASVIEN NKDSHLHFHLFFESISEKNKSRILEIQSYNVSITTYELQEELSVNPNTLILGIPKSTCLR FMVPFVLRHEVDSVLYLDGDMICLDSLHALHDLNLTGHIAAVVADSKEMQQKASTLGYGI DTDKYFNAGFLFINVSEWNFKNVTAVAFSMINSGTIYKYADQDVLNILLNENIKLIDKKY NKTITLSPIDRVDDKASRGTTILHYVTKNKPWFMIFESQIFFYYLNQSPWKDTQLKLTPN ASLLRIKSKKLFSDKKFVDWMKYFSLYIKYKLFSK >gi|316919464|gb|ADCU01000009.1| GENE 58 74588 - 75343 30 251 aa, chain + ## HITS:1 COG:STM4295 KEGG:ns NR:ns ## COG: STM4295 COG2207 # Protein_GI_number: 16767545 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 11 248 11 247 253 119 31.0 5e-27 MKLGYDSCFAVVLCHQESTVVIDDITKVLVPACHKILLNCQASSHTILSDGLIEVIKIDH CTIRDFLASTTSDAYHLPYRPKKKYWEFISKCIFVEVFSLVIRLSKSSHLSTIEAYYHKR LLHLLLYAFSTDKDFIPYLVKEINLGLAFAVQELIMSDLTKNWSLDSIARLLFVSSSTLK KKLKQEGTSYQKILVKSRMQYAAKQLSINSNLTISQLAEQCGYSHLSYFIFVFKNHYGVT PYQFCRKQMAA >gi|316919464|gb|ADCU01000009.1| GENE 59 75481 - 75801 297 106 aa, chain + ## HITS:1 COG:no KEGG:ETAE_2870 NR:ns ## KEGG: ETAE_2870 # Name: hdeB # Def: acid-resistance protein # Organism: E.tarda # Pathway: not_defined # 12 101 23 113 120 102 57.0 4e-21 MKTKHALLSGCALAASLLLGSITSVQAAENNPSKMTCEEFVNLNPKAMAPVALWMLNDKT EYKGGDSVDLNMVETVAVPQTLEFCKKSPKANVYEFKNNLQSLIAH >gi|316919464|gb|ADCU01000009.1| GENE 60 76813 - 78210 1485 465 aa, chain - ## HITS:1 COG:ECs0875 KEGG:ns NR:ns ## COG: ECs0875 COG0513 # Protein_GI_number: 15830129 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 389 1 389 455 639 86.0 0 MSFDTLGLSAELLRAVEEQGYREPTPIQSQAIPVVLQRRDLMASAQTGTGKTAGFTLPLL QILSQDTQPAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNLRSLVVFGGVSINPQMM KLRGGVDVLVATPGRLLDLEHQHAVDLSKVEILVLDEADRMLDMGFIHDIRRVLAKLPAK RQNLLFSATFSDEIKELANKLLTNPASVEVARRNTASEQVAQSVHFVDKRRKRELLSQLI GTHNWQQVLVFTRTKYGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKTGSIRVLV ATDIAARGLDIDQLPHVVNFELPNVPEDYVHRIGRTGRAECTGEALSLVCVDEHKLLRDI ERLLKREIPRIAIEGYEPDPSIKADPIQNGRQSQGRGQGRGQSQGRSQGNGQSRDGARSG DKPRANNGGQRRAQGEGRKPESRGDAPASQQRRPYRGNKKTATTA >gi|316919464|gb|ADCU01000009.1| GENE 61 78563 - 79717 972 384 aa, chain - ## HITS:1 COG:STM2692 KEGG:ns NR:ns ## COG: STM2692 COG0845 # Protein_GI_number: 16766006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Salmonella typhimurium LT2 # 28 384 31 387 387 377 56.0 1e-104 MQEDMARQSRFYSSVVWITLAGMVGFFIWAYFATLDEVTVGTGKVTTSIRAQLIESLDGG IVSALLVHEGDIVKKGQILARLDPKRFQSNYGEAAARARALRASSERLRSELTGEPLKFS ASTLAEPALVARERQLYESRRRNLNETVANLQESYRLVVAELRMTQPLVAKGAASQVEVI RLQRQASELQGKIDDARNQYALRAREEQVKNNADLDAQLEVMAGKEDQLDRVTMISPVRG IVKDIQVMTVGGVLQPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDSS IYGNLNGTVEIVSPDTLQDEVRRDQYYYRVYVRTQSAELSNKAGRKFPILPGMVASVEIK TGQKTVLDYLIKPLNKVKEALRER >gi|316919464|gb|ADCU01000009.1| GENE 62 79744 - 81888 249 714 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 462 705 2 236 312 100 31 3e-20 MAADQHANADKWILAMGRAAGRFGLPCDIPALRQQMRWFENLPVQRRLERLGALLGLQIS IRPKNNVKWRNEIMPVMAQLEDGSVLILENMDAEKHVSYWLSDCGDMVREEELDALLARI QPDVVLLGIAARGQDSRIDDFVQPYREHWFWHHFKHAGRKLSEISLASVLGNVLALAGIL FSMQVYDRVIPAQSYPTLWVLFIGVLFAAFLEYFIRLSRTHISDLMGKHIDLKVSSMFFA RALAIKNDARPKSTGSFISQLREIDQVRELLTSTTVGAAMDMPFVLLFLAIMAMVGGPLV AIPLIAIPLIVIPGILIQWPLAKLAKEGMRESAIRNAVLVESIEGVEDIKALQAEPYFQR QWEQTHHVSAAIGMKQRVWGARLSGWASTVQQITYAGMLVLGAYLVLAGDITTGTMVACS LLSSRTIAPLMQLTMVFSRWQHAKSAMTGLNELLKKPLDREPEKKMAHCPALAGHYQFEN VQYSYDIEKGEQALYIPELEIKPGERVALVGKVGAGKSTLLKLLSGQAEPSKGKLIIDGV DMAHIDPVDVRRQIGLLSQDSRLFFGTLRQNLMLGHPHATDQELIQALRISGALGMVQKD AASLDRMINEGGRGLSGGQRQMVMLSRMIVRNPQVVLLDEPTASMDEQLESYVIRQLQSW MAGRTLVLVTHRPALLAMVDRIIVMDNGKVVADGSRDEILGQAQRNSNVTSVVA >gi|316919464|gb|ADCU01000009.1| GENE 63 81919 - 83280 1078 453 aa, chain - ## HITS:1 COG:ECs0540 KEGG:ns NR:ns ## COG: ECs0540 COG1538 # Protein_GI_number: 15829794 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 16 421 13 420 451 348 51.0 2e-95 MKRLKKWPVTAWLCCGLSCFTSFPLLAKTPAADYQWQSAPSEQMEAELSIKEAILRAFGR HPQIAQASAQIHVGAANLTVAKSAWFPQISLQSAAGRSHQTDSSGSLNSNASAGVTLNQL LYDFGKTSGSIDEQQNLGAAYDYQLYSVLNNVGQQTVQAYLQVKRYQELMAAAQRNLASL EAVKEMSKLRADAGLSSQSDVLQAETRIAGMNATYEQYRAQERSAQANLSVLTGVVATNL PDLPKDLLDQKITIKDLPYEQNSAVRSAQAKQLAAEQRVRQAEAQHWPTISVQAGRTRYE NSASSYWDDQVQLVVQAPIYQGGATSAKVDAAEGDRQSAQAEVEASKLDINQKASVAYAD LIGAQQRQLAGEEQFSSAENTRSVYQDEYKLSKRSLNDLLSVEQDVLQADSAAIIARYDV WDAAVRYAGAVDNLLDMLNISRPKVTGDTLPAL >gi|316919464|gb|ADCU01000009.1| GENE 64 83567 - 95800 9149 4077 aa, chain - ## HITS:1 COG:no KEGG:Ctu_32110 NR:ns ## KEGG: Ctu_32110 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 216 4077 1 3864 3864 2293 44.0 0 MAQSNSASGTLENSGNVDIVARSNGKQITQYAHAQGNRVVTLTESSVVRIHGDSAMVASY ERQGNDLIVHMKDGSTMRYQRFFFIDEHGEHSELVFDDGKTTHHAIFPFADMAGSSTAQA VIPTYQTLGDGITTLVGHEGISAGVIGGVLGALAIGGGIALAAGGGGGGHGDSNSGDGSG NGNGGNGNGNGGGNGNGNGGNGNGSGNGGGTTNPTLKLNAFAGDNILNHNESLASQILSG STAASNAGRTITITMGGKTYTGIVGKDGNWSINIPTADLQALPQGNLNISATITNSAGHS TTTNLVVNVKTTLPDLTLNAFAGDNILSKLESALTQHLSGKTSADNAGQKVTLTLNGKTY TGIVGADGTWSIGVISGDLQHLPQGLINLSVSITDKYGNTSTKTEQIDVKTTSPLISVAQ FAGDDVLNSAEAKTAQVLSGTTLNVEAGRVVTIKLDNGKTYLAVVQSDGSWKATIPESDL SSLSVGNHSFTVSVSDLANQTANSTHSFKASGDSSSIAISIVSSDDYLSANEALLPLAIN GTTVGVSAGAHVTVLLNGKTYGATVGVAGHWTVSVPAADLAGLADGPIKITASVKDSQGN TVSNQHTLNVLTHDLPAPTIDTPFTDGILNLQESGKVQTLTGTSGIHGAQTVTVTLGGKV YSAVVDAQGHWSVSVPVNDLHNFADGLLAYQVSATDAAGNNGKINGSVSVDTTAPLLSIA VFAGDDVLNATEQKNVQTVSGTASATEQGKHVDVQINGKHYSATVGADGRWSVNVPAADL APLTNGNHTISATLTDAAGNSTTTSHNFVVKNLQPTVTVSTFAGDGTLDNSEAKTDQILK GTTTNAETGSTITVTLNGQTYTTHVLSNGSWSLKIPSADLEKLPDGIANGSVSVTDLAGQ TVNGKFSFTVDTDTTHGSIAIAIIAGDDYLSVAESNGALNIHGTTTNVSTGSSVTVTLNG KNYTATVDANGNWQTSVSSVDLKALKDGVATVTATVTDKDGHSVSATHDLNVLTHTLPNP TINVPFGDGVLNATEAQSAQTITGKTGIAGAGQTITLNLNGHDYTGSVDANGNWKVVVPQ ADVQMLQNGNQVIKVTAGDIAGNQVSGSLSASVDTVAPVLTVNPFSGDNRLNIQEATQAQ TLSGTAVGAEVGQKVSITLNGKTYTATVDASGNWTTSIPSADLKALSNGDTTISMSVTDK AGNGASLQQTISIDSDPNYAPLLSVNVFAGNDVLDGTERQNLQTVTGKAVNVEVGQVVTV TIGGSSYTGTVKAGGSWSVNIPAGALSGLNNGSYTLDVKVSDLSGNSAQASHGFTVNTSA SALTVSPLTGDNLVNSAEVASGLVVNGTSVNIPVGGTVEITLNGKTYTTTIQAGGAWSFT VPTLDAKAIPDGTATVTVAAVDSAGNPVSSSQNFGIITHSSPNPTLNTPFGDGYLNAAEA GSNQQLSGTTGVAGVGQQVTVNFGGKNYTATVDAQGNWTVNIPSGDFTSLKDGPQTITVT ATDAVGNSNNASGSAQIDKTLPVLTINPITGDNVINAAEAHSPLVISGTAPVSDSGDTVI LKVVVNGATYTANVNPDGTWSLTLPAGALNGISDGNILFNASLTDAAGNTGTVNQVVKLD ASAANQPTIHIGTISGDDYINAVEINAPLTISGTSTHVEANQIVTITLNGKTYTTSVNAD GSWSYDVPIADVKLLPDGIDGINVSVSDTSGNPATDSHNVTVIAQPADLPTIHVNTVAGD NVINAKEAQSDLQITGTTTHVTNGQTVTVTLGGKTYIGSVDANGLWSVTVPAADVQNLGQ GSQNIVASVNDIAKNPASDTHNVQVDTQAPLLSIDLFVTDNILNYAEALVSQILSGKTDP GQTVSVTINKNTVQVTADGNGIWKLTVSAGDLQALPDGTNTITVTATDSAGNTTSKDLSL NVGTHLLPTLTLDTPFTDGILSIAESAAGGVLTGTSSHLLEGTQITITIGSGSNSVQLIG SVGANGNWSIPVSGHALDILADGKAGISVTATDTFGNVGSTTGQLDVLTHFEPTAVLTLP LFGDNILNNAEALLGQTLTGNSGLLGAGQTVYITLDGTRYPGAVDANGNWTVQLPSNVLG ALSDSTGHTLSVTLADRAGNSDTSTVANFTSHVTLPVPTLDVPFGDGILNFVDSQTATSL HGLSGLNTNVGVSVVVNVNGTPISATVNADGSWTLALDVATLQSLPDGTWVLSVTVTDSA GNVVTSATQNAEILTHTLPAPTINLPFGDGLLSIAETGLPQTLTGSTGIIGAGQIVKVTI GTETLTATVTDNGKWTLVVQPDALATVIDGPGKIHVEVTDHAGNSKSVDGDFTASLVAPN PTIGTLFNDGFLNIGEANDTIVLTGKTGSSGPNQAVKLSIDIDGVTYTGSVDDSGNWTIS LPPKALVNIGNGEHEITLTAQDAAGNSTTITPAPTFIAYLTPPTVTLDTPFGDGALNISD SASVQTLYGSLTLNNSPIAKSHVTVTINNHDYTATISADGTSWSLDLQPSDMTTLNLGSG VQNIKVSVTDEGENTNSSTGQALIALTPPTITVDTNFISDGVIDYADLHTAQTISGGSTG LSVGQSITINIGGRPFTTTVNGDGSWNYTLKITDLVDIPNGSLVVTATDAAGNSATSPST SYTVDPLSSVPGITIDPISVDNLLGSDDLTSGIVTVSGHSTGLAPLSTIVVTISGLPPYT SPPLVVAADGTWQVSVPSTVFSEGSHTITAIGGLPLPQTANLDVNVDLTAPTLTINAFAG NDILNAAEAAVPQTLSGTASAADIGQNVQITLNSKTYSASVVSDGAGGAKWSVVIPVADM AALGQSSPTIVATLTDKAGNSVEVDRPIQVDTTIPLVSVNPISIGSLLNTINIGAGMLLN GSSEPNSSITIKLGPLTETVQTDNTGKWSLTIPTLDLQTLVDGPQVISVTSTDSAGNVSV PVNVGLNVALNPGLGDTVNTLIGGNGVLNLAESLLTQTLSGTASGNYTGAKVTTTILGQD FTATVGNNGKWSINIDPSLWLLASGKTLDFDLVLTDVNGNIVHTPVHVDLALTDLPIIQN VVAIGDGFLNKLESTANNVVTGTLGNMVAGTTVDVQLGINTFHATVNSNGTWSASIPQNV LAGLQDGSVKVVITATDPSGNVVTSNTNLNVITHNLPTLVLDPLFGDGVLSLTEALLGGL SIGGSTSGMVGQTLQVLIGGSQVATALVGADGKWSIAVTPQILGILEGIVGGNVTVEVKG SDIAGNPVDQSVGLKLDLTAPLLSNISLFGDGLLNAVDATTNQLITGTATGAPLGSTVSV VVGGKTFTGVTLADGSFSITLTPANLSQLPDGSLTATVTVTTPTGNTSSATAGVKVGLTN LPTIALNALFGGDGYLNHVESLVNQTISGKVTNMTSGSVNINVGGTLLTATINADGTWSQ VISSSVLSNLPDGKLNISVSVTDSVGNIITQPSILTTLTHALPSISIGSLFGDGALSVGD LLSAQVISGTSVNLAGGSLSLTLGGKAYSIPVDNNGAWSLSVPPLDLKALLDGNLTVSVT AKDVAGNPASASGLLSVITHALPTLTIGSIFGDGGLNIGDLASAQVISGTSTNAQGSQLT VTLGGKSYLTTVGSDGSWSISVPQTDLSLLGDGNLGVNVSLTNPIGNTVSTGGALNVITH LPTVGIASGLFGSDGVLNIAESGVSQLLSGTVSSALPGAKVVVTLGAVDYQATVNTNGTW SLNLSPTLLKTLTDGNLHIGVKVTDVVGNTNSTAVDVGVKLTQPILTMAALALPSLTDLL FGGKLVVIKGTAGNLKQGDNVHVSLLNDTLAADAKVDGQGNWSASLTLTLDLLNLLLLNK VVNLSAHDYAGNGVSVNVGLDGHIIDITPTSAPAPMMMAMSLDDVDTSQSSSQDHLSQSL SSTSGDESVTTPSSGTFTIGGVTIDLADGTHNSGASVTGSTANDTVHVTDLGFTHIDGGS GTDTLVLNGSNMNLDLTSLGMKVEHIEIFDLGKAGNNTITLDLKEALKVTDKPEDDLLIK GSVGDRVNLVHGQGDIWDVSGQREVNGVTYDVYHNSSTGNSTLGDVLIQQGLHVNLM >gi|316919464|gb|ADCU01000009.1| GENE 65 96297 - 97034 358 245 aa, chain + ## HITS:1 COG:ECs0874 KEGG:ns NR:ns ## COG: ECs0874 COG1309 # Protein_GI_number: 15830128 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 5 225 2 222 227 206 49.0 3e-53 MKSSDQPLNTPTTSRGEQAKQALIDSAIILFGERGLEGATTRDIALKAGQNIAAITYYFQ SKEGLYLAVARWISEFISRAFAPLEHECSLFLAQKAPAPSEYLSFIRRGLSIFCHLMTQP ETLHLSQIMSREQLAPTAAYPLIHQQCIAPLHQLMTKLVAGYSGLPPESSITTLHTHALL GEVLAFRMARETIRIQAGWASIGPEQADLINQVLQQHIELLLNGLRMAYSPHGQMQSTTY GNSDE >gi|316919464|gb|ADCU01000009.1| GENE 66 97027 - 98025 972 332 aa, chain + ## HITS:1 COG:STM0818 KEGG:ns NR:ns ## COG: STM0818 COG0845 # Protein_GI_number: 16764181 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Salmonella typhimurium LT2 # 21 329 20 328 331 399 69.0 1e-111 MNNKKLIGIVAVLVIVALALGGFYYYRSHEDRGLTLYGNVDIRTVNLGFRVGGRLASLDV DEGDTVTRGMLLGKLDDAPFVNSLNEAKANVAAAQAQLDLLLAGYRTEEIAQARAAVAQQ QAAFSYADSYLKRQQGLWASKATSANDLEDAKTARNQALANLQAAKDKLSQYETGNRPQE IEQAQASLAQAQAAADQAELNLKDTQLIAPSDGTILTRAVEPGTMLASGSTVFSVSLTRP VWIRAYVSEENLSKAIPGTEIQIYTDGRPNKPYHGKIGFVSPTAEFTPKSVETPELRTDL VYRLRVIVTDADDSLRQGMPVTLRFNDDGATR >gi|316919464|gb|ADCU01000009.1| GENE 67 98037 - 99773 330 578 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 331 539 12 222 318 131 34 1e-29 MSTQHEIVLDGVEKRFAGMAQPAVASLTTRIASGAVMGLVGPDGAGKTTLIRMLAGLLKP STGKIQVVGLDPIAQDSELHAILGYMPQKFGLYEDLTVIENLTLYADLRGVIGEERQKTF EKLLKFTDLTRFTERLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWR MVHELADEGMLILWSTSYLDEAEQCREVLLMNEGKLLYSGAPQELTQRMAGRTILLRAKG ISHRKLLQRAICLPSVSDGVIQGKYLRLILKENAEHSALLQALEQPEAELLEAEPRFEDA FIDLLGGGPDHESELAKIMPQVKVDPAETVIEAQQLTKKFGDFAATDHVDFQVKRGEIFG LLGPNGAGKSTTFKMMCALLKPTSGKALVLGLDLKTDSGRARQHLGYMAQKFSLYGNLTV AQNLKFFSGVYGLKGKQQKDKINGMINAFNFTPILDQTPDSLPLGFKQRLALACSLMHEP DILFLDEPTSGVDPLTRREFWLHINGMVDKGVTVMVTTHFMDEAEYCDRIGLVYRGKIIA AGSPDQLKNSVANDDNPNPTMEQAFIELVQGYDKEQMS >gi|316919464|gb|ADCU01000009.1| GENE 68 99770 - 100915 1086 381 aa, chain + ## HITS:1 COG:STM0816 KEGG:ns NR:ns ## COG: STM0816 COG0842 # Protein_GI_number: 16764179 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Salmonella typhimurium LT2 # 10 381 5 376 376 563 79.0 1e-160 MSESANNIHFSWRRLRALCRKETAQILRDPSSALIAVVIPLMLLFIFGYGINLDSSKLHV GILMEQQSEDARDLANTFIGSPYIAATVSDDRQGLIKKLQAGKIRGLIVIPVDFSAQLAR PEGKAPIQVITDGSEPNTANFVQGYAEGIWQIWLQQRAVDNGGEFKPLINVQLRYWFNPA AISQHFIIPGAITIIMTVIGAILTSLVIAREWERGTMEALLSTQVTRTELLLSKLLPYYI LGLLAMTLCMLVAVFVMGVPYRGSLAILFVMTSLFLASTLGMGLLISTITRNQFNAAMVA LNAGFLPAVMLSGFIFEIDSMPAIVQAVTYVIPARYFVSTLQTLFLAGNIGSVLLVNLLF LIISAAVFIGLTAWKTKRRLD >gi|316919464|gb|ADCU01000009.1| GENE 69 100925 - 102049 821 374 aa, chain + ## HITS:1 COG:ECs0870 KEGG:ns NR:ns ## COG: ECs0870 COG0842 # Protein_GI_number: 15830124 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 1 373 1 367 368 580 82.0 1e-165 MFYRLWTLIVKELQSLLRDPQTRAILIMPVILQVVLFPFAATLEVTNASIAIYSEDSGQS SVELTQRFAKAKAFSNVLLLHSPQEIAPTIDNRQALLLIRFPANFSRDILSGHQAPLQLI LDGRSSNSAQIAANYVQQIVRDYQQELVSGQPAQSQDLAQKNSALVVRNWYNPNLDYKWF VVPSLIAMITTIGVLIVTSLSVAREREQGTLEQLLVSPLNTWQIFVGKAIPALIVATFQA TIVLLIGIFAYQIPFAGSLLLFYFTMLIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMP AILLSGYVSPVENMPVWLQNLTWVNPIRHFTDITKELYLKDVSFDIIWHSLWPLLVITLT TGSAAYAMFRRKIA >gi|316919464|gb|ADCU01000009.1| GENE 70 102151 - 104856 1699 901 aa, chain + ## HITS:1 COG:STM2269_1 KEGG:ns NR:ns ## COG: STM2269_1 COG0642 # Protein_GI_number: 16765596 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 41 697 42 699 699 511 43.0 1e-144 MLSPKEPSKSNDASLSGITRSYALFICLLVLANLLYGYNYVNAYINSKQTMLSSVADQLQ KRIETYRFVTYQIYDNLSASNSVQLPSPVNEIRLRPDIYLLEKSRHKTDALIFGLHDVTT SDLAMRMSNYLDILWGAETETYSMYYLNGQDNSLILISTMPMKDLSARYKEGYLGNVVES RKAEMLQQSNSLDEREGFSGLRKFRFLNSYYFTLRTTFNNPGHLATVVAFDLPVGDILPR DLPVQRFQITENPDSLSEMMSREEIPAAYTTLRWPWLTISAPLYNTPLKVDFNVPATTLI VDMLRNNFWLLLINLLVLALSFTGFYFVRHQYIRPGKRMAAQLSAQQEMNQEIITHLPIG LLIYRFDTDTVVASNKIADHLLPHLSLSKIASMAQEHQGRIQATVNNEMYEIQMVRSQQN IKSALFLMRDLDKEMMVSKKLKQAQSEYEKNLTARKIMTSNLSRELNDPLSNIQKLVTDI QNNKDDPRVLDLLWAEARHAQVLINEITLLTEIENRDWRPVTETFNLNKRIDELLKRSLP EIRRKGLTLINHTDIEPEREFIGDIRSLEQVLSMLLHYSIITTVYGKITLKVTQKPESPD HLYFELSDTGTGVSNKEIYGLRYPNLGEPQSDRFAKGSGMTYYLCGQLCKRMSGRLDIQS KDDIGTRYNFNCIMHPVEKQEEESEKLLDGITAYLQITSDEIRSLITHKLAAFGAASIIA DGRDANEEYDITLTDSPDNADDYTLLLVSDIDGFEEYAPHRIKANFNLTEPLIDAILLLI EQQIAVTESPIDTDYAENEDPASDSTPFKSKDYFSLFVETVPEDVQKLYTEAEQSDLSPL SLTAHRLKGVFAMLNIPTGKTLCEQLEHAIKESDVTNIKILISQIDTFVSRLLLLGSQQH E >gi|316919464|gb|ADCU01000009.1| GENE 71 104849 - 104998 119 49 aa, chain + ## HITS:1 COG:YPO1218 KEGG:ns NR:ns ## COG: YPO1218 COG2197 # Protein_GI_number: 16121509 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Yersinia pestis # 1 48 1 48 217 92 97.0 3e-19 MNNLNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINSLSKLG >gi|316919464|gb|ADCU01000009.1| GENE 72 105082 - 105297 68 71 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E3230 NR:ns ## KEGG: SbBS512_E3230 # Name: not_defined # Def: putative IS1 encoded protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 35 71 1 37 37 65 97.0 8e-10 MAENRVEANAHNAGGCPASNAIHGHINDFLVRTGLRSGVSELQLPCFTAVRAEIALMSGS AFAVTHHPVSS Prediction of potential genes in microbial genomes Time: Wed May 18 15:05:47 2011 Seq name: gi|316919296|gb|ADCU01000010.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.10, whole genome shotgun sequence Length of sequence - 186477 bp Number of predicted genes - 172, with homology - 161 Number of transcription units - 91, operones - 34 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 122 - 388 147 ## COG1662 Transposase and inactivated derivatives, IS1 family 2 1 Op 2 . + CDS 442 - 918 483 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 1024 - 1079 6.5 + Prom 1122 - 1181 2.8 3 2 Tu 1 . + CDS 1353 - 1553 95 ## - Term 1299 - 1332 0.5 4 3 Tu 1 . - CDS 1582 - 4440 1965 ## COG0642 Signal transduction histidine kinase - Prom 4495 - 4554 1.6 - Term 4501 - 4553 8.3 5 4 Tu 1 . - CDS 4577 - 7225 3050 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 7337 - 7396 4.5 + Prom 7382 - 7441 4.3 6 5 Tu 1 . + CDS 7512 - 8216 718 ## COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase + Prom 9201 - 9260 5.0 7 6 Op 1 24/0.000 + CDS 9366 - 11651 2172 ## COG0209 Ribonucleotide reductase, alpha subunit 8 6 Op 2 8/0.033 + CDS 11776 - 12906 1000 ## COG0208 Ribonucleotide reductase, beta subunit 9 6 Op 3 . + CDS 12915 - 13253 165 ## COG0633 Ferredoxin - Term 13372 - 13411 8.2 10 7 Op 1 . - CDS 13465 - 14175 559 ## COG0670 Integral membrane protein, interacts with FtsH - Prom 14293 - 14352 2.4 - Term 14195 - 14232 1.7 11 7 Op 2 . - CDS 14385 - 14963 550 ## COG0655 Multimeric flavodoxin WrbA - Prom 15005 - 15064 5.0 12 8 Tu 1 . - CDS 15093 - 15350 70 ## EAMY_1063 hypothetical protein - Prom 15406 - 15465 4.6 13 9 Op 1 21/0.000 - CDS 15599 - 16051 457 ## COG0314 Molybdopterin converting factor, large subunit 14 9 Op 2 11/0.000 - CDS 16054 - 16296 280 ## COG1977 Molybdopterin converting factor, small subunit 15 9 Op 3 6/0.167 - CDS 16293 - 16775 518 ## COG0315 Molybdenum cofactor biosynthesis enzyme 16 9 Op 4 . - CDS 16819 - 17805 793 ## COG2896 Molybdenum cofactor biosynthesis enzyme - Prom 18044 - 18103 6.8 + Prom 17999 - 18058 8.2 17 10 Tu 1 . + CDS 18211 - 19119 964 ## COG0391 Uncharacterized conserved protein + Term 19146 - 19177 2.1 - Term 19133 - 19165 3.1 18 11 Tu 1 . - CDS 19201 - 19488 186 ## COG4269 Predicted membrane protein - Prom 19735 - 19794 5.9 - Term 20530 - 20569 3.4 19 12 Tu 1 . - CDS 20604 - 21797 899 ## COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - Prom 21874 - 21933 4.7 + Prom 21868 - 21927 3.8 20 13 Op 1 . + CDS 21981 - 23219 1053 ## COG0814 Amino acid permeases + Term 23276 - 23314 2.0 + Prom 23320 - 23379 3.0 21 13 Op 2 . + CDS 23400 - 24416 958 ## COG0180 Tryptophanyl-tRNA synthetase + Term 24424 - 24468 4.8 - Term 24412 - 24453 7.2 22 14 Tu 1 . - CDS 24475 - 25020 587 ## ROD_26631 hypothetical protein - Prom 25141 - 25200 4.9 23 15 Tu 1 . + CDS 25418 - 26851 1554 ## COG0753 Catalase + Term 26877 - 26908 4.1 - Term 26865 - 26896 4.1 24 16 Op 1 . - CDS 26924 - 28090 526 ## 25 16 Op 2 10/0.000 - CDS 28116 - 28841 606 ## COG3121 P pilus assembly protein, chaperone PapD 26 16 Op 3 6/0.167 - CDS 28853 - 31336 1317 ## COG3188 P pilus assembly protein, porin PapC - Prom 31360 - 31419 5.1 27 17 Tu 1 . - CDS 31438 - 31980 412 ## COG3539 P pilus assembly protein, pilin FimA - Prom 32086 - 32145 6.5 28 18 Op 1 6/0.167 - CDS 32461 - 33879 825 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 29 18 Op 2 5/0.233 - CDS 33860 - 34831 858 ## COG1441 O-succinylbenzoate synthase 30 18 Op 3 9/0.033 - CDS 34831 - 35688 975 ## COG0447 Dihydroxynaphthoic acid synthase 31 18 Op 4 15/0.000 - CDS 35702 - 36475 473 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 32 18 Op 5 10/0.000 - CDS 36472 - 38151 1368 ## COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase - Prom 38262 - 38321 4.9 - Term 38309 - 38340 1.1 33 18 Op 6 . - CDS 38411 - 39733 948 ## COG1169 Isochorismate synthase - Prom 39761 - 39820 6.1 34 19 Tu 1 . - CDS 39961 - 40320 204 ## - Prom 40377 - 40436 2.6 - Term 40356 - 40401 -0.8 35 20 Tu 1 . - CDS 40461 - 40964 444 ## EFER_1894 conserved hypothetical protein; putative inner membrane protein - Prom 41030 - 41089 8.4 + Prom 41083 - 41142 5.8 36 21 Tu 1 . + CDS 41277 - 42743 1357 ## COG4690 Dipeptidase + Term 42837 - 42880 -0.2 - Term 42754 - 42801 3.1 37 22 Tu 1 . - CDS 42834 - 43739 521 ## COG0583 Transcriptional regulator - Prom 43971 - 44030 4.9 + Prom 43683 - 43742 2.8 38 23 Op 1 6/0.167 + CDS 43962 - 45461 1080 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 39 23 Op 2 . + CDS 45471 - 46058 390 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase 40 23 Op 3 . + CDS 46095 - 46811 658 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump + Prom 46882 - 46941 4.8 41 24 Op 1 . + CDS 47125 - 47793 584 ## COG1335 Amidases related to nicotinamidase 42 24 Op 2 . + CDS 47816 - 48724 423 ## ECP_4037 hypothetical protein + Term 48756 - 48802 6.1 43 25 Op 1 . + CDS 48815 - 50365 1044 ## COG0074 Succinyl-CoA synthetase, alpha subunit 44 25 Op 2 . + CDS 50362 - 51789 1055 ## c4765 hypothetical protein 45 25 Op 3 . + CDS 51786 - 52745 806 ## COG0549 Carbamate kinase 46 25 Op 4 . + CDS 52779 - 53168 486 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 47 25 Op 5 . + CDS 53224 - 54468 941 ## COG1457 Purine-cytosine permease and related proteins + Term 54513 - 54549 6.3 48 26 Tu 1 . + CDS 54565 - 55470 480 ## COG0583 Transcriptional regulator + Term 55506 - 55535 2.8 - Term 55491 - 55526 5.8 49 27 Op 1 . - CDS 55556 - 56059 585 ## AHA_2521 hydrogenase 2-specific chaperone 50 27 Op 2 5/0.233 - CDS 56049 - 56543 507 ## COG0680 Ni,Fe-hydrogenase maturation factor 51 27 Op 3 4/0.333 - CDS 56543 - 58246 1572 ## COG0374 Ni,Fe-hydrogenase I large subunit 52 27 Op 4 6/0.167 - CDS 58243 - 59430 1186 ## COG5557 Polysulphide reductase 53 27 Op 5 4/0.333 - CDS 59423 - 60403 833 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 54 27 Op 6 . - CDS 60406 - 61560 746 ## COG1740 Ni,Fe-hydrogenase I small subunit - Term 62468 - 62516 0.6 55 28 Op 1 2/0.533 - CDS 62535 - 64904 1965 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases 56 28 Op 2 . - CDS 64937 - 66289 1190 ## COG0477 Permeases of the major facilitator superfamily - Prom 66471 - 66530 5.5 + Prom 66327 - 66386 5.3 57 29 Tu 1 . + CDS 66575 - 67645 752 ## COG1609 Transcriptional regulators 58 30 Tu 1 . + CDS 67752 - 70070 2174 ## COG1472 Beta-glucosidase-related glycosidases 59 31 Tu 1 . - CDS 70042 - 70170 63 ## - Prom 70302 - 70361 3.9 - Term 70340 - 70399 3.9 60 32 Tu 1 . - CDS 70420 - 71277 98 ## - Prom 71308 - 71367 2.9 - Term 71298 - 71362 2.2 61 33 Tu 1 . - CDS 71379 - 72986 1353 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 73060 - 73119 4.6 - Term 73090 - 73132 6.2 62 34 Op 1 7/0.133 - CDS 73147 - 74496 985 ## COG0534 Na+-driven multidrug efflux pump 63 34 Op 2 . - CDS 74539 - 74958 275 ## COG1846 Transcriptional regulators + Prom 75149 - 75208 8.7 64 35 Op 1 5/0.233 + CDS 75357 - 76028 700 ## COG1462 Uncharacterized protein involved in formation of curli polymers 65 35 Op 2 5/0.233 + CDS 76055 - 76414 337 ## COG4259 Uncharacterized protein conserved in bacteria 66 35 Op 3 . + CDS 76411 - 77067 507 ## COG4380 Uncharacterized protein conserved in bacteria + Term 77093 - 77121 2.1 67 36 Tu 1 . - CDS 77144 - 77698 456 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 77735 - 77794 2.8 - Term 77811 - 77855 8.7 68 37 Op 1 22/0.000 - CDS 77888 - 79360 1582 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) 69 37 Op 2 30/0.000 - CDS 79367 - 80905 1475 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) - Prom 80926 - 80985 1.8 70 37 Op 3 26/0.000 - CDS 80994 - 82841 1611 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 71 37 Op 4 30/0.000 - CDS 82838 - 83140 460 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 72 37 Op 5 28/0.000 - CDS 83137 - 83715 660 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 73 37 Op 6 31/0.000 - CDS 83726 - 84268 700 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 74 37 Op 7 18/0.000 - CDS 84283 - 85260 892 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 75 37 Op 8 12/0.000 - CDS 85257 - 88007 2697 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 76 37 Op 9 23/0.000 - CDS 88041 - 89402 1351 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 77 37 Op 10 15/0.000 - CDS 89399 - 89899 469 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 78 37 Op 11 9/0.033 - CDS 89902 - 91713 1762 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 - Prom 91750 - 91809 1.6 - Term 91748 - 91801 2.3 79 38 Op 1 30/0.000 - CDS 91823 - 92497 534 ## COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 80 38 Op 2 3/0.333 - CDS 92546 - 92986 350 ## COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) - Prom 93069 - 93128 1.8 - Term 93576 - 93626 9.3 81 39 Tu 1 . - CDS 93669 - 94628 611 ## COG0583 Transcriptional regulator - Prom 94778 - 94837 8.8 - Term 94829 - 94871 2.4 82 40 Tu 1 . - CDS 94990 - 95673 257 ## COG0398 Uncharacterized conserved protein + Prom 95657 - 95716 3.4 83 41 Tu 1 . + CDS 95833 - 97146 1127 ## COG2897 Rhodanese-related sulfurtransferase + Term 97326 - 97380 4.7 - Term 97314 - 97367 4.5 84 42 Op 1 . - CDS 97482 - 98111 383 ## COG0558 Phosphatidylglycerophosphate synthase 85 42 Op 2 . - CDS 98104 - 98694 292 ## COG2128 Uncharacterized conserved protein - Prom 98731 - 98790 7.1 + Prom 98738 - 98797 6.5 86 43 Tu 1 . + CDS 98994 - 100214 1142 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 100229 - 100270 6.1 + Prom 100237 - 100296 1.6 87 44 Tu 1 . + CDS 100331 - 100936 674 ## COG1896 Predicted hydrolases of HD superfamily - Term 101000 - 101039 4.3 88 45 Tu 1 2/0.533 - CDS 101162 - 103063 1394 ## COG0471 Di- and tricarboxylate transporters - Prom 103084 - 103143 5.4 - Term 103095 - 103125 3.0 89 46 Op 1 . - CDS 103152 - 103805 545 ## COG0637 Predicted phosphatase/phosphohexomutase 90 46 Op 2 2/0.533 - CDS 103821 - 104315 543 ## COG3013 Uncharacterized conserved protein - Prom 104340 - 104399 4.8 91 47 Tu 1 . - CDS 104572 - 104964 381 ## COG3092 Uncharacterized protein conserved in bacteria - Prom 105037 - 105096 4.3 92 48 Op 1 14/0.000 + CDS 105433 - 106632 1320 ## COG0282 Acetate kinase + Term 106645 - 106680 3.4 + Prom 106661 - 106720 2.6 93 48 Op 2 . + CDS 106788 - 108944 2014 ## COG0857 BioD-like N-terminal domain of phosphotransacetylase + Term 108970 - 108998 3.0 94 49 Op 1 12/0.000 - CDS 109026 - 109991 901 ## COG3958 Transketolase, C-terminal subunit 95 49 Op 2 1/0.600 - CDS 109988 - 110818 716 ## COG3959 Transketolase, N-terminal subunit 96 49 Op 3 11/0.000 - CDS 110828 - 112213 1419 ## COG3037 Uncharacterized protein conserved in bacteria 97 49 Op 4 13/0.000 - CDS 112252 - 112524 180 ## PROTEIN SUPPORTED gi|148984431|ref|ZP_01817719.1| PTS system, IIB component, putative 98 49 Op 5 . - CDS 112611 - 113054 273 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 113139 - 113198 2.9 + Prom 113275 - 113334 7.6 99 50 Tu 1 . + CDS 113364 - 114383 513 ## COG1609 Transcriptional regulators - Term 114274 - 114319 -0.1 100 51 Tu 1 . - CDS 114404 - 115018 534 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 101 52 Tu 1 . - CDS 115131 - 115679 376 ## COG0622 Predicted phosphoesterase 102 53 Tu 1 . - CDS 115817 - 116461 330 ## COG0625 Glutathione S-transferase - Prom 116564 - 116623 4.5 + Prom 116528 - 116587 4.2 103 54 Tu 1 . + CDS 116673 - 117299 522 ## COG0625 Glutathione S-transferase + Term 117301 - 117351 1.9 + Prom 117322 - 117381 3.4 104 55 Op 1 3/0.333 + CDS 117407 - 117784 368 ## COG1539 Dihydroneopterin aldolase 105 55 Op 2 . + CDS 117883 - 118788 708 ## COG1090 Predicted nucleoside-diphosphate sugar epimerase + Term 118922 - 118977 6.5 106 56 Op 1 6/0.167 - CDS 119563 - 120336 257 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 107 56 Op 2 12/0.000 - CDS 120347 - 121063 427 ## COG4160 ABC-type arginine/histidine transport system, permease component 108 56 Op 3 12/0.000 - CDS 121060 - 121746 612 ## COG4215 ABC-type arginine transport system, permease component - Prom 121767 - 121826 2.3 - Term 121777 - 121815 6.8 109 56 Op 4 5/0.233 - CDS 121828 - 122610 750 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 122693 - 122752 4.5 110 57 Op 1 . - CDS 122977 - 123558 620 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase 111 57 Op 2 . - CDS 123555 - 123935 336 ## COG5499 Predicted transcription regulator containing HTH domain - Prom 124093 - 124152 4.0 - Term 124024 - 124082 16.1 112 58 Op 1 18/0.000 - CDS 124192 - 125709 1503 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 113 58 Op 2 7/0.133 - CDS 125731 - 126246 501 ## COG1286 Uncharacterized membrane protein, required for colicin V production - Prom 126285 - 126344 4.1 - Term 126406 - 126449 9.0 114 59 Op 1 7/0.133 - CDS 126502 - 127299 705 ## COG3147 Uncharacterized protein conserved in bacteria 115 59 Op 2 15/0.000 - CDS 127289 - 128575 1200 ## COG0285 Folylpolyglutamate synthase - Term 128608 - 128649 4.6 116 59 Op 3 5/0.233 - CDS 128740 - 129648 999 ## COG0777 Acetyl-CoA carboxylase beta subunit - Prom 129883 - 129942 5.8 - Term 129832 - 129888 0.3 117 60 Op 1 5/0.233 - CDS 129957 - 130631 617 ## COG0586 Uncharacterized membrane-associated protein - Term 130643 - 130674 -0.3 118 60 Op 2 5/0.233 - CDS 130696 - 131517 581 ## COG0101 Pseudouridylate synthase 119 60 Op 3 5/0.233 - CDS 131553 - 132563 1100 ## COG0136 Aspartate-semialdehyde dehydrogenase - Prom 132652 - 132711 3.1 120 61 Tu 1 . - CDS 132736 - 133863 1050 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 133911 - 133970 2.6 - Term 133896 - 133948 0.1 121 62 Tu 1 . - CDS 133972 - 134748 320 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 134813 - 134872 2.8 + Prom 134729 - 134788 3.4 122 63 Tu 1 . + CDS 134901 - 135830 235 ## PROTEIN SUPPORTED gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily + Term 135841 - 135882 9.4 + Prom 135833 - 135892 4.3 123 64 Tu 1 . + CDS 135982 - 136155 180 ## + Term 136162 - 136214 8.1 - Term 136270 - 136323 -0.9 124 65 Op 1 2/0.533 - CDS 136386 - 136910 326 ## COG0526 Thiol-disulfide isomerase and thioredoxins 125 65 Op 2 1/0.600 - CDS 136907 - 137650 815 ## COG1651 Protein-disulfide isomerase 126 65 Op 3 . - CDS 137655 - 139682 1141 ## COG4232 Thiol:disulfide interchange protein - Term 139691 - 139733 -0.3 127 65 Op 4 . - CDS 139735 - 140037 156 ## - Prom 140135 - 140194 6.6 + Prom 140076 - 140135 4.2 128 66 Op 1 . + CDS 140372 - 140737 230 ## CKO_01542 hypothetical protein 129 66 Op 2 . + CDS 140882 - 141313 242 ## + Term 141332 - 141375 10.1 + Prom 141560 - 141619 9.5 130 67 Tu 1 . + CDS 141686 - 141817 71 ## - Term 141966 - 141996 -0.9 131 68 Tu 1 . - CDS 142058 - 142456 343 ## plu3746 hypothetical protein - Prom 142587 - 142646 5.2 + Prom 142412 - 142471 4.3 132 69 Tu 1 . + CDS 142672 - 142893 322 ## Kvar_2398 protein of unknown function DUF903 + Term 142919 - 142944 -0.5 - Term 142899 - 142940 5.1 133 70 Tu 1 . - CDS 142958 - 144172 1248 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 144213 - 144272 3.2 + Prom 144262 - 144321 5.8 134 71 Tu 1 . + CDS 144346 - 146364 1205 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Term 146377 - 146434 18.1 - Term 146365 - 146422 18.1 135 72 Op 1 . - CDS 146426 - 146776 251 ## YPO2729 hypothetical protein - Term 146800 - 146842 10.2 136 72 Op 2 . - CDS 146852 - 147130 413 ## ECA3065 hypothetical protein 137 72 Op 3 5/0.233 - CDS 147153 - 147707 455 ## COG3101 Uncharacterized protein conserved in bacteria - Prom 147737 - 147796 4.2 - Term 147763 - 147824 -0.9 138 73 Tu 1 . - CDS 147840 - 148652 720 ## COG0730 Predicted permeases - Prom 148696 - 148755 4.5 + Prom 148760 - 148819 5.7 139 74 Tu 1 . + CDS 148874 - 149611 691 ## COG1794 Aspartate racemase - Term 149549 - 149590 -0.9 140 75 Tu 1 . - CDS 149594 - 150490 619 ## COG0583 Transcriptional regulator 141 76 Op 1 . - CDS 150575 - 151738 1145 ## SARI_03063 isoaspartyl dipeptidase 142 76 Op 2 3/0.333 - CDS 151752 - 152216 514 ## COG0700 Uncharacterized membrane protein 143 76 Op 3 . - CDS 152221 - 152901 467 ## COG3314 Uncharacterized protein conserved in bacteria - Prom 153056 - 153115 6.5 + Prom 152891 - 152950 4.3 144 77 Tu 1 . + CDS 153059 - 153181 80 ## - Term 153101 - 153129 1.3 145 78 Tu 1 . - CDS 153143 - 153979 427 ## COG3770 Murein endopeptidase 146 79 Tu 1 . - CDS 154091 - 155176 1092 ## COG0082 Chorismate synthase - Prom 155238 - 155297 2.3 147 80 Tu 1 . - CDS 155316 - 156248 1501 ## PROTEIN SUPPORTED gi|238920643|ref|YP_002934158.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific - Prom 156297 - 156356 5.0 + Prom 156405 - 156464 2.9 148 81 Tu 1 . + CDS 156488 - 157030 455 ## COG2840 Uncharacterized protein conserved in bacteria 149 82 Tu 1 . - CDS 157171 - 157638 507 ## COG2062 Phosphohistidine phosphatase SixA - Prom 157711 - 157770 1.8 - Term 157849 - 157888 5.1 150 83 Op 1 20/0.000 - CDS 158033 - 160156 1782 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 151 83 Op 2 3/0.333 - CDS 160180 - 161508 1147 ## COG0183 Acetyl-CoA acetyltransferase - Term 161808 - 161837 2.1 152 84 Tu 1 . - CDS 161867 - 162163 322 ## COG3691 Uncharacterized protein conserved in bacteria - Prom 162240 - 162299 7.6 + Prom 162489 - 162548 6.4 153 85 Tu 1 . + CDS 162569 - 163894 1252 ## COG2067 Long-chain fatty acid transport protein + Term 164117 - 164142 -0.5 - Term 164102 - 164133 2.5 154 86 Op 1 1/0.600 - CDS 164149 - 164976 571 ## COG2853 Surface lipoprotein 155 86 Op 2 9/0.033 - CDS 165029 - 166240 1306 ## COG4235 Cytochrome c biogenesis factor 156 86 Op 3 10/0.000 - CDS 166243 - 166725 477 ## COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes 157 86 Op 4 11/0.000 - CDS 166725 - 167276 531 ## COG0526 Thiol-disulfide isomerase and thioredoxins 158 86 Op 5 16/0.000 - CDS 167273 - 169246 1742 ## COG1138 Cytochrome c biogenesis factor 159 86 Op 6 9/0.033 - CDS 169243 - 169749 580 ## COG2332 Cytochrome c-type biogenesis protein CcmE 160 86 Op 7 9/0.033 - CDS 169746 - 169985 251 ## COG3114 Heme exporter protein D 161 86 Op 8 14/0.000 - CDS 169985 - 170740 626 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component - Prom 170883 - 170942 5.2 162 86 Op 9 14/0.000 - CDS 170951 - 171610 705 ## COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component 163 86 Op 10 . - CDS 171607 - 172227 631 ## COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component - Prom 172467 - 172526 3.1 + Prom 172426 - 172485 4.6 164 87 Op 1 . + CDS 172625 - 174313 1284 ## COG2986 Histidine ammonia-lyase 165 87 Op 2 . + CDS 174306 - 175877 1034 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 166 87 Op 3 . + CDS 175879 - 176307 219 ## Spea_3370 tetraheme cytochrome c 167 87 Op 4 . + CDS 176317 - 177972 470 ## COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) + Term 178001 - 178047 9.6 - Term 177996 - 178029 4.0 168 88 Tu 1 . - CDS 178053 - 178337 114 ## COG3284 Transcriptional activator of acetoin/glycerol metabolism - Prom 178359 - 178418 5.0 - Term 179029 - 179059 -0.9 169 89 Tu 1 . - CDS 179072 - 179503 190 ## SO_3059 formate hydrogenlyase transcriptional activator, putative + TRNA 179798 - 179872 69.5 # Arg CCT 0 0 + Prom 180683 - 180742 2.0 170 90 Op 1 . + CDS 180829 - 181506 198 ## 171 90 Op 2 . + CDS 181565 - 182023 237 ## gi|284007883|emb|CBA73807.1| hypothetical protein + Term 182050 - 182089 1.4 172 91 Tu 1 . + CDS 182505 - 186477 2805 ## YPO3944 putative invasin Predicted protein(s) >gi|316919296|gb|ADCU01000010.1| GENE 1 122 - 388 147 88 aa, chain + ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 88 80 167 167 171 100.0 3e-43 MATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARL GRKSLSFSKSVELHDKVIGHYLNIKHYQ >gi|316919296|gb|ADCU01000010.1| GENE 2 442 - 918 483 158 aa, chain + ## HITS:1 COG:YPO1218 KEGG:ns NR:ns ## COG: YPO1218 COG2197 # Protein_GI_number: 16121509 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Yersinia pestis # 1 158 59 216 217 269 92.0 2e-72 MPGDKYGDGITLIKYIKRHFPHLSIIVLTMNNNPAILSAVLELDIEGIVLKQGAPADLPK ALAALQKGKKFTPESVSKLLEKISASGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRS IKTISSQKKSAMLKLGVDNDIALLNYLSSVNIMSVDKE >gi|316919296|gb|ADCU01000010.1| GENE 3 1353 - 1553 95 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRILAIVVRSVKTGMMKRGNPRSGLEGGAKLGCWGAAIGPPTRTLAQWLCGIQCFKRTK HYTVIT >gi|316919296|gb|ADCU01000010.1| GENE 4 1582 - 4440 1965 952 aa, chain - ## HITS:1 COG:YPO1217_1 KEGG:ns NR:ns ## COG: YPO1217_1 COG0642 # Protein_GI_number: 16121508 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 1 717 9 726 726 930 63.0 0 MKYLASFRTTLRISRYLFRSLALVLWILGALLTTFYILNEFHEKESDIRQDFNLSFDQAQ SVIKHSASIMRDIRYIAENRLSWSVTGLDMINGVFSGKNTLPPLTPIFPESDCQLLSDNY RNSLESLSNFINYWKENFVAAYDLNRIFFIGGESLCLADFGIRNTPLDQSHVFRNLHQRI LTFQNSNNKEKENTLFWVIPSAQNDAGALYVITPVYIANKLEALLGTEQNIRLEDFTNPS TLPVGVTLLNDNNEVLMTYTENGGELPSISGIPNDDNYFGYNSGYDTLLLKKKLNPSGLS IIYSLPTSVLLERFNLLLINAVIMNLISALILFVLTLVFERKMFSPAENNAFRLEEHEQF NRKIVASAPVGICILRIKDGSNILSNELAHNYISMFTSEDRHRITRIICEQPSSVVDVIT SQNQNLQISFVHSRYRNEDVAICVMVDVSARVKIEESLQELANAAEQASQSKSMFLATVS HELRTPLYGIIGNLDLLQTKSLPEETQRLLAAMSNSSGLLLKIISDILDFSKIESEQLKI EPGTFEPRKVIPHIIGNYLPLVVRKRLVMYCFIEPEVPDSVAGDIMRIQQVLSNLLSNAI KFTDTGCIILQVRVQDFYLEFRIRDTGLGIPFRDVMKLFDPFFQVGTGVQRHFQGTGLGL AICEKLVSLMDGDIAVESEPGMGSIFTVRIPMYQAVASNPQVEALMQKPIWLEIHNARLE SYLLKLLTLAGADVHLCCANEQGDEHGVLISDHDVTLYQPVKAHIRLSAEYIGHAKCKDD GSWVLSTAAPLELLSILRRIFAPEDMALLPGLSEESSNVEVHDYSDVHILIVDDHPINRR LLADQLISLGYHSVSTASDGLDALGALAKLHADIVLTDVNMPNMDGYQLTARLRQQGRTA PIIGVTANALAEERERCIQVGMDSCLSKPVTLEELQASLAHFAEVVRKGRRS >gi|316919296|gb|ADCU01000010.1| GENE 5 4577 - 7225 3050 882 aa, chain - ## HITS:1 COG:YPO1216 KEGG:ns NR:ns ## COG: YPO1216 COG0188 # Protein_GI_number: 16121507 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Yersinia pestis # 1 850 1 850 891 1511 91.0 0 MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN KAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVLPTKVPNLLVNGSSGIAVGMAT NIPPHNLNEVINGCLAYIDDENITVEGLMQHIPGPDFPTAAIINGRRGIEEAYRTGRGKV YIRAKAEVEADEKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRLEGISALRDESDKDG MRIVIEIKRDAVGEVVLNHLYSLTQMQVTFGINMVALHQGQPKLLTLKDCLQAFVRHRRE VVTRRTIFELRKARDRAHILEGLAIALSNIDPIIELIRHAPNPAEAKALLVARGWALGTV AAMLERAGDNAARPEWLEPQFGIRDGHYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE LLEQIAALIFILESPDRLMEVIREELIAVRDQFGDARRTEITENTADINIEDLISQEDVV VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY WMKVYQLPEASRGARGRPIINLLPLEANERITAILPVREYEEGRHVFMATASGTVKKTAL TDFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAAGKVVRFPESQVRSMGRTATG VRGINLNGEDRVVSLIIPRGEGDILTVTENGYGKRTGVAEYPTKSRATQGVISIKVSERN GNVVGAVQVDACDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDEHVVGLQRVA EPEEDDEVLDGEEGAAVEGDVADVAEDANDAPEQDEEGDENA >gi|316919296|gb|ADCU01000010.1| GENE 6 7512 - 8216 718 234 aa, chain + ## HITS:1 COG:YPO1215 KEGG:ns NR:ns ## COG: YPO1215 COG2227 # Protein_GI_number: 16121506 # Func_class: H Coenzyme transport and metabolism # Function: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase # Organism: Yersinia pestis # 4 234 10 240 242 418 83.0 1e-117 MSEQNVDQQEIAKFEAVASRWWDLEGEFKPLHRINPLRLNYIQQRADGVFGKKILDVGCG GGILAESMAREGADVTGLDMGAEPLQVARLHSLETGIKVTYVQETVEQHANEHAGLYDIV TCMEMLEHVPDPRSVVLACAKLVKPGGHVFFSTINRNNKAWLMAVIGAEYVLKMVPKGTH DVKKFIRPSELIGWIDETPLRERHMIGLHYNPVTDHFKLAPNVDVNYMVHTVRD >gi|316919296|gb|ADCU01000010.1| GENE 7 9366 - 11651 2172 761 aa, chain + ## HITS:1 COG:YPO1214 KEGG:ns NR:ns ## COG: YPO1214 COG0209 # Protein_GI_number: 16121505 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Yersinia pestis # 1 761 1 762 762 1472 91.0 0 MNQSLLVTKRDGSKERINLDKIHRVLDWAAEGLSNVSVSQVELRSHIQFYDGIRTADIHE TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPKLYDHVVKLVEMGKYDKHLL EDYTPEEFAQMDEFIDHWRDMNFSYAAVKQLEGKYLVQNRVSGEIYESAQFLYILVAACL FSNYPRDTRLSYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG AATLFYPLWHLEVESLLVLKNNRGVEGNRVRHMDYGVQLNRLMYQRLIKGGDITLFSPSD VPGLYDAFFADQDEFERLYMQYEADDSIRKQKVKAVELFSLMMQERASTGRIYIQHVDHC NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGVINSLDDLEE LAVLAVRALDALLDYQDYPILAAKRGAMGRRTLGIGVINYAYYLAKNGVRYSDGSANNLT HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAQGILPIDTYKKDLDTICNEPLHYDWE ALRNDIKQYGLRNSTLSALMPSETSSQISNATNGIEPPRGHISIKASKDGILRQVVPEYD RLKNAYELLWEMPNNDGYLQLVGLMQKFIDQSISANTNYDPSRFPSGKVPMKQLLKDLLT AYKFGAKTLYYQNTRDGAEDVQDDLQATPEDDGCESGACKI >gi|316919296|gb|ADCU01000010.1| GENE 8 11776 - 12906 1000 376 aa, chain + ## HITS:1 COG:YPO1213 KEGG:ns NR:ns ## COG: YPO1213 COG0208 # Protein_GI_number: 16121504 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Yersinia pestis # 1 376 1 376 376 706 91.0 0 MAYTTFSQNQNDQLLEPMFFGQSVNVARYDQQKHEIFEKLIEKQLSFFWRPEEVDVSRDR IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWSFSETIHS RSYTHIIRNIVNDPATVFDDIVTNEEILKRAKDISGYYDDLIEMSSYWHLLGEGTHNVNG KTVTVNLRALKKQLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA LHLTGTQHILNLMRSGQDDPEMAEVAVECEQQCYDLFVLAAEQEKEWADYLFRDGSMIGL NKDILCQYVEYITNIRMQAVGLKLPFQTRSNPIPWINAWLVSDNVQVAPQEVEVSSYLVG QIDSEVNADDLSDFEL >gi|316919296|gb|ADCU01000010.1| GENE 9 12915 - 13253 165 112 aa, chain + ## HITS:1 COG:YPO1212 KEGG:ns NR:ns ## COG: YPO1212 COG0633 # Protein_GI_number: 16121503 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Yersinia pestis # 32 112 5 85 85 104 61.0 5e-23 MTFTSQDHMLAVDDAASIQPESSAILPATPTITLTLSGARLDYIHTKGSLLETLEHHKVQ VEYQCRSGYCGSCRCKLTKGQVVYRQKPLAFINEGEILPCCCHPIDDIEVEL >gi|316919296|gb|ADCU01000010.1| GENE 10 13465 - 14175 559 236 aa, chain - ## HITS:1 COG:YPO1163 KEGG:ns NR:ns ## COG: YPO1163 COG0670 # Protein_GI_number: 16121459 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Yersinia pestis # 1 236 1 236 236 331 79.0 8e-91 MDRYPRGNGSIVERANTGLQTYMAQVYGWMTCGLLLTSIVAWYAAHTPAVLNFIFSSKIT FFGLVIVQLGLVFVLSGMVHKLSAAAATSLFMLYSALTGLTLASIFIVYTYSSIASTFVV TAGMFGAMSLYGYTTKRDLSGIGSMMFMGLIGIILASLVNIWLKSPALTWVITYAGVIIF VGLTAYDTQKLKAMGEQLSPDDKDNFRKYSILGALTLYLDFINLFLMLLRIFGNRR >gi|316919296|gb|ADCU01000010.1| GENE 11 14385 - 14963 550 192 aa, chain - ## HITS:1 COG:RSc2207 KEGG:ns NR:ns ## COG: RSc2207 COG0655 # Protein_GI_number: 17546926 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Ralstonia solanacearum # 1 191 1 187 190 213 58.0 1e-55 MTALAVVFHSGYGHTAKAAEAVAAGVKNVEGVTVDVLPIDSEGNLPEGGWHLLAKADGII FGSPTYMGGPSWQFKKFADASSKPWFSQEWKDKVFAGFTNSASMNGDKLGTLDYMFHLSQ QHGGVWVGMGMLPANTKTANRNDVNYIAGFSGLMTVSPSDASPDEAPLPGDLETARKFGE RVASVANRWAKV >gi|316919296|gb|ADCU01000010.1| GENE 12 15093 - 15350 70 85 aa, chain - ## HITS:1 COG:no KEGG:EAMY_1063 NR:ns ## KEGG: EAMY_1063 # Name: not_defined # Def: hypothetical protein # Organism: E.amylovora # Pathway: not_defined # 1 83 1 83 101 142 77.0 5e-33 MIWFEQGLYLRVEELDNGPRPLPLCSGFSEGVSYRALGVFNPSESSDAYYILSNDRDEIW FICNRHLRTVALLPDSTDFRRPLSL >gi|316919296|gb|ADCU01000010.1| GENE 13 15599 - 16051 457 150 aa, chain - ## HITS:1 COG:YPO1162 KEGG:ns NR:ns ## COG: YPO1162 COG0314 # Protein_GI_number: 16121458 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Yersinia pestis # 1 150 2 151 151 258 83.0 3e-69 MKNTRIRVGQENFSVGDEYQWLSQCEDDGAVVTFTGKVRNHNLGDNVSALTLEHYPGMTE KALSEIVSEARERWPLQRISLIHRVGAMYPGDEIVFVGVTSAHRSMAFEAAEFIMDYLKT RAPFWKREATEQGDRWVDARDSDHQAAKRW >gi|316919296|gb|ADCU01000010.1| GENE 14 16054 - 16296 280 80 aa, chain - ## HITS:1 COG:STM0805 KEGG:ns NR:ns ## COG: STM0805 COG1977 # Protein_GI_number: 16764168 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, small subunit # Organism: Salmonella typhimurium LT2 # 1 80 3 83 83 115 74.0 2e-26 MIKVLFFAQVRELTGSDELSCEVYPTVEALRTALAERGDKWALALESGKLLAAVNQTLVE FSHPLSSGDEVAFFPPVTGG >gi|316919296|gb|ADCU01000010.1| GENE 15 16293 - 16775 518 160 aa, chain - ## HITS:1 COG:STM0804 KEGG:ns NR:ns ## COG: STM0804 COG0315 # Protein_GI_number: 16764167 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Salmonella typhimurium LT2 # 1 159 1 159 161 263 90.0 1e-70 MSQLTHINAAGEAHMVDVSAKAETVREARAEAYVEMKPETLAMIVEGKHHKGDVFATARI AGIQAAKRTWELIPLCHPLLLTKVEVQLFAEVDTHRVRIESCCRLTGKTGVEMEALTAAS VAALTIYDMCKAVQKDMVIGPVRLLSKSGGKSGDFKADAS >gi|316919296|gb|ADCU01000010.1| GENE 16 16819 - 17805 793 328 aa, chain - ## HITS:1 COG:YPO1159 KEGG:ns NR:ns ## COG: YPO1159 COG2896 # Protein_GI_number: 16121455 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Yersinia pestis # 1 328 1 326 326 547 79.0 1e-156 MLQLTDAFERKFYYLRLSITDVCNFRCTYCLPDGYKPNGHANKSFLSLDEIRRVSRAFAE LGTEKVRLTGGEPSLRRDFVDIISAVRENQSIRTLAVTTNGYRMARDIASWREAGLTAVN VSVDSLDARQFHAITGEDKLKQVMQGIDAAFDAGFEKVKVNTVLMRDVNDRSLNGFLSWI KTRPIQMRFIELMETGDGGDLFRKHHVSGEVIRDQLLALGWQRQERARSDGPAQVFRHPD YLGEVGLIMPYEKDFCASCNRLRVSAIGNLHLCLFGESGIPLRDLLAGDEHLDALKLRIQ GGLRHKKQTHFLHDGNIGHTQNLSFIGG >gi|316919296|gb|ADCU01000010.1| GENE 17 18211 - 19119 964 302 aa, chain + ## HITS:1 COG:STM0801 KEGG:ns NR:ns ## COG: STM0801 COG0391 # Protein_GI_number: 16764164 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 301 1 301 302 430 80.0 1e-120 MRNRALADLDKVVALGGGHGLGRVMSALSPLGSRLTGIVTTTDNGGSTGRIRRSEGGIAW GDMRNCLNQLITEPSVASAMFEYRFNGNGELAGHNLGNLMLKALDHLSVRPLEAINLIRS LLKVDASLIPMSEQPVDLNAIDNDGHIIYGEVNIDQLKEMPAQLMLEPQVQATREAVEAI EKADLILIGPGSFLTSLMPLLLLDDLTQALRRTRAHMIYIGNLGKELSVAAAALTLPDKL KIMEDAIGGHAIDAVVVGPKVNVSGIENRIVVQETLEASDIPYRHDRDLLRMAIEKALQQ LS >gi|316919296|gb|ADCU01000010.1| GENE 18 19201 - 19488 186 95 aa, chain - ## HITS:1 COG:YPO0399 KEGG:ns NR:ns ## COG: YPO0399 COG4269 # Protein_GI_number: 16120733 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 95 300 394 398 69 37.0 1e-12 MVALRKYVFSSTTLQDRVSFRSTLTFTGCLWQTLSNLLISVCTCWLAYPWAKVRYARYVA KNTWIDGDLEALDLQDHDEQPEGSIISRISRGLML >gi|316919296|gb|ADCU01000010.1| GENE 19 20604 - 21797 899 397 aa, chain - ## HITS:1 COG:YPO1210 KEGG:ns NR:ns ## COG: YPO1210 COG1058 # Protein_GI_number: 16121501 # Func_class: R General function prediction only # Function: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA # Organism: Yersinia pestis # 1 391 1 391 397 486 64.0 1e-137 MLRLEMLCTGDEVLHGQIVDTNSAWLADYLFQQGIPMRSRSTVGDSLEDLVSTLQLRSQY ADVLIVNGGLGPTSDDLSAQAAAEALGESLVVHPEWIARMEAYFASRGRPMSESNRKQAM IPASAEMIDNPVGTACGFSIQLNDCWIFFTPGVPSEFKVMVEQQIVPRLRQRFPQTESPL CLRLTTFGRSESGLAQQLDSFPLPPDTTLGYRSSMPIIELKLTGPSSQREEMLNVWQHVR AVAGENCIFEGTAGLPHDVALGLREKGLRLALSEQFTAGLLSWQLRSVDAPLANSELPEH MGNSTLKEVAARARILATHSGADLTIAIGELQDDRISVVLHSQQETFGQTMAYSSQRHSQ KIRQEMTAMLALDMLRRWLNDESPYGNYEWLKPEALL >gi|316919296|gb|ADCU01000010.1| GENE 20 21981 - 23219 1053 412 aa, chain + ## HITS:1 COG:tyrP KEGG:ns NR:ns ## COG: tyrP COG0814 # Protein_GI_number: 16129857 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli K12 # 10 412 1 403 403 556 78.0 1e-158 MDRFNAEESVKNRTLGSIFIVAGTTIGAGMLAMPLAAAGVGFGTTFIMLVTLWALMCYTA LLLVEVYQHQSADTGLGTLAKHYLGRSGQWLTGASMLFLMYALTAAYISGAGELLASSLS QWLSFEIKPSAGVLLFTLIAGGIVCIGTHSVDMFNRVLFSAKIILLIIMLTLMMPHVHQA NLLTMPLEKGLALSAIPVIFTSFGFHGSVPSIVSYMNGNLRKLRWVFIIGSAIPLIAYIF WQLATLGSISSSSFVGILAAQSGLNGLLQAVREVVATPHVELAVHLFADLALATSFLGVA LGLFDYLADLFQRSNKASGRAQTGLMTFLPPLAFALFYPQGFVMALGYAAVALAVLALLI PSMLVWQTRKHHPQEGYRVVGGKPLLVLVFACGVAVIAVQLSIASGLLPAVG >gi|316919296|gb|ADCU01000010.1| GENE 21 23400 - 24416 958 338 aa, chain + ## HITS:1 COG:STM4508 KEGG:ns NR:ns ## COG: STM4508 COG0180 # Protein_GI_number: 16767752 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 10 338 7 335 337 528 79.0 1e-150 MINSTNSHTILTGDRPTGPLHLGHYVGSLRQRVTLQDRYPQYVLIADLQGLTDNGSNPQK ISQNIFEVMADYLAVGIDPAKTTICLQSALPALAELTMLYMNIVTVARVERNPTVKAEIA QKGFSRSLPTGFLVYPISQAADITAFKADRVPVGDDQLPMLEQTNEIVHKMNSLLPNPVL VPCQAMLSSVSRLPGIDGNAKMSKSLGNTLTLSASEDDISKAVHAMYTDPNHLRVSDPGQ VEGNVVFTYLDAFHPDQAQVAALKEHYQRGGLGDRQCKQELEACLQALLSPIRERRQQFS ADKAALMDILQAGTEKAHEVTQQTLSEVKRGLGLPVMF >gi|316919296|gb|ADCU01000010.1| GENE 22 24475 - 25020 587 181 aa, chain - ## HITS:1 COG:no KEGG:ROD_26631 NR:ns ## KEGG: ROD_26631 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 181 1 180 180 197 58.0 2e-49 MKKIVLGCACAALFSASAANAITVHGQVGEHYTNVEAGFGTDSAGLYSTLDWAHNDSDGD VAGLGLGINLPLGPFLASAGGKALYLNPQKDGGDDYAVAAGGGIQWPITRHFTLYGEGYY SPESLSSGINNYKEASAGMRWNVIRPVTIDVGYRYIEISGKDGNRDNVVADGAYVGAGIG F >gi|316919296|gb|ADCU01000010.1| GENE 23 25418 - 26851 1554 477 aa, chain + ## HITS:1 COG:YPO1207 KEGG:ns NR:ns ## COG: YPO1207 COG0753 # Protein_GI_number: 16121498 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Yersinia pestis # 3 476 5 478 480 900 90.0 0 MSKKGLTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGA HGTFTVTHDITKYTRAKIFSEIGKQTPMMVRFSTVAGERGAADAERDIRGFAMKFYTEEG NWDLVGNDTPVFYLRDPLKFPDLNHVVKRDPRTNLRNPVYKWDFFSQLPEAFHQLTIDFS DRGLPKSYRHMHGFGSHTFSFINADNERFWVKFHFRCQQGIENLMDDEAEALVGKDRESS QRDLYDAIERKDFPRWNLQVQIMPEKEAAQTPYNPFDLTKVWPHKDYPLIDVGFFELNRN PDNYFAEVEQVAMNPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPQCP FHNYHRDGAMRVDGNSGNGATYEPNSFGVFQEQPDFSEPPLTLEGAADHWNHREDTDYYS QPRALFNLLSEEEHQRMYTRIAGELSQVPEAIQKRALCHFAQIHPDYAAGIMKALGQ >gi|316919296|gb|ADCU01000010.1| GENE 24 26924 - 28090 526 388 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRWLTASRVTAVMATLLLFCLSSGNSWAGLHCDINSGGAAPFSPFTRENPIAVDENTPD YTVVLSLDYAQFLPNMRLSCSSDGQEFTAPANFDGNITLSLSAINDKALDWTGEAQTTNN GIKLKMYIKAVSYNTDSLANSYSPASMSPGKRLGVEYPVINGKEDTTLFQFGAQYNADKT QYKYDGNYNFAIESMRAELIKFGWIQYQSQAVIPPGAHLTFTIDGLSGVNTVDVPLGSGV FMASPSCSLDSKHQTVSLGNINKTSSGTYPQQGPLTSFGMDFTCSSYTNNVEFTFEDAHA ILQGRDTLTVKSEADGKTLDGIAVGLFDSAGKAVRTGTKQNIGAALKGKNTTHFQAAIIQ TAPEITDSNNNNFTGDITAKANVTITYY >gi|316919296|gb|ADCU01000010.1| GENE 25 28116 - 28841 606 241 aa, chain - ## HITS:1 COG:STM3639 KEGG:ns NR:ns ## COG: STM3639 COG3121 # Protein_GI_number: 16766925 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 1 240 1 232 232 142 37.0 7e-34 MKKLTQIAVPALMSMLLLSNVAFAAVRPALTRVVALESDKETSIKILNDDKTQDYLVQSW LEDQKGNDKGLPLILTPPLFKIGAGREGKLRMVVVPGRIPQDRESVYWLWIQEVPPVSKV QGSQLQVAVRTRLKVFIRPTTLTEKSADTASKLQWQVRREGGKEWIVANNPTEYYASLSE LSVTTGGKSIPVVDKNAMVPAKGEMRYAAPAGVSGKSGVLNYSTINDFGGETPVLHQSLS F >gi|316919296|gb|ADCU01000010.1| GENE 26 28853 - 31336 1317 827 aa, chain - ## HITS:1 COG:STM0023 KEGG:ns NR:ns ## COG: STM0023 COG3188 # Protein_GI_number: 16763413 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 43 804 64 852 873 379 35.0 1e-104 MSAFFPFTLHAGNNESAAFDADFLRQSSQEIPQQFYNPDHVDAGTKSVDVVLNDRTLFKT NIEFILLKGSDNATPCLTQGLLHQIGLDHHLNELAKSGNEVCYDFLVKWPDAKIKYDEAM QQLIIIAPQAAMNVSSQSEMIDPSLWDSGVNALRMSYSGYVYHTENHGSDADSGSDNTAY LSLNSGLNLGSWRFYSFDTFNKSQMGWEQNHDRAYAERDIAPLVSRFTVGDVYANTSSDV LGILPVRGMTLETNDQMLPSGTFSYAPIIRGVAHSNARVVIRQRGNIIYSKTVSPGSFAI TDLTNGQIGADLNVTVEESDGSKQAFTVPYTSLPNMLRPGSWRYSLSAGRYRDNGLSYDP LVTQGSLQYGWDRLTLSDLVVIGEGYQSMALGGAFNLGALGSVSLDWAFEKHQARTENNV NDDNARPEKDVNDSGRALRVLYARRFDDTDTSLQLMAYRYQTPDFVDFPEYADWRWGDDD SQYHRKNEIQATINQGLGDFGSGYLTLQRDSYYDSSAKDTSITMGYSFNIHSVSVNVDYT YQANSGNGAESPDRQLSLNLSVPLDMGEKRSRDISFSTNNSNHSGNSQMATVSGSELDSA LNYSLSAQRSSDGYSPSASVSYRNSMANMNASASASQDSRQYSAGISGGVVAYRHGVVLS QQLGDTIAIIETPGAKNISVEGQPGVSTDRWGHAVVPSISPYRDNNLSLDTRHTEDNVEL IDGGGNVIPTHGAIVVRRFQTKIGRRAIVMLSLSDGKLAPFGATAWQGKEQVGMVADNGL LYLNGILADGDTTLHVTLPNDGQCQFVLPVAKDASAPWYQQINAVCH >gi|316919296|gb|ADCU01000010.1| GENE 27 31438 - 31980 412 180 aa, chain - ## HITS:1 COG:Z4971 KEGG:ns NR:ns ## COG: Z4971 COG3539 # Protein_GI_number: 15804092 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 EDL933 # 1 170 5 170 178 73 35.0 2e-13 MKINLLTLVALSVIPLSSFAADGDITFTGTVKASACSLQGFNGGEGKSALMQLSSVTPSS FSSAGGYAGMKDFTIDLKECDTTTMKNARVSFSGTPDLVDNSILKNIQENNAAQGVGIAI LENDGSTVIDINGGVPSKSQALTQGNTELKFKVAYKANTSTPAVSSGDVKAKTFIDIAYN >gi|316919296|gb|ADCU01000010.1| GENE 28 32461 - 33879 825 472 aa, chain - ## HITS:1 COG:STM2305 KEGG:ns NR:ns ## COG: STM2305 COG0318 # Protein_GI_number: 16765632 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Salmonella typhimurium LT2 # 16 468 3 449 455 521 59.0 1e-147 MWYGVPSMTAPIYPVFSDWPWQHWASQLPDSTALLLNETPMSWLALNEKISQLAASFIQQ GVIPDAIVAVRGKNSAELLLAYLAVLQCGARVLPLNPQLPDTLLAELLPSLNVGYGYSPE ADFCWPSPIKTLATAPSDVVSPTHTLPQWHSQRLATLTLTSGSTGMPKAAAHSFNAHLSS AKGVLSLMPLGPQDSWLLSLPLFHVSGQGIVWRWLLAGACLVVRNMRVLDDALRGCTHAS LVPTQLWRLLNQPETLLTLKEVLLGGAMIPVDLTEQAEQRGIRCWCGYGLTEMASTVCAK RADALPGVGLPLPGREMKLQDAEILLRGDNMASGYWRDGQLFPLADPDGWFHTRDRGEMQ NDELRIIGRLDNLFFSGGEGIQPEDVERVLLAHPQIQQVFVVPVDDREFGQRPVAVIEPL AELDFAVLSTWVQGKLARFQQPVRYLRLPESLKNGGIKISRQAVLNWVVSQN >gi|316919296|gb|ADCU01000010.1| GENE 29 33860 - 34831 858 323 aa, chain - ## HITS:1 COG:YPO2524 KEGG:ns NR:ns ## COG: YPO2524 COG1441 # Protein_GI_number: 16122743 # Func_class: H Coenzyme transport and metabolism # Function: O-succinylbenzoate synthase # Organism: Yersinia pestis # 1 321 1 321 323 484 78.0 1e-136 MRQVTLYRYSLPMDAGVILRNQRLKTRDGLIVCLREGEHEGWGEIAPLPEFSHETLEQAQ EAALTDLQQWLAGQSLSENALPSVAFGLSCALAELSGELPIQADYRKAPLCSGDPDELFA VLQAIPGEKVAKVKVGLYEAVRDGMVVNVLLEALPDLKLRLDANRSWTRAKADGFAKYVN PEWRNRIAFLEEPCKTRDESRDFARTTGIAIAWDESVREPDFRVEAEEGVAAIVIKPTLT GSLQRCQQLITEAHQIGLEAVISSSIESSLGLTQLARVAAWLTPDTVPGLDTLDLMQAQL IRPWPENNLPLQDVASLDVVWRS >gi|316919296|gb|ADCU01000010.1| GENE 30 34831 - 35688 975 285 aa, chain - ## HITS:1 COG:YPO2525 KEGG:ns NR:ns ## COG: YPO2525 COG0447 # Protein_GI_number: 16122744 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Yersinia pestis # 1 285 1 285 285 554 90.0 1e-158 MLYPSEQELYAPIEWQDCSADFEDILYHKSADGIAKITINRPQVRNAFRPQTVKEMIQAM SDARYDDHIGTIILTGAGEKAFCSGGDQKVRGDYGGYKDASGTHHLNVLDFQRQIRTCPK PVVAAVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKA REIWFLCRQYNAQEALDMGLVNTVVPLADLEKETVRWCREMLRNSPMALRCLKAALNADC DGQAGLQELAGNATMLFYMTDEGQEGRNAFNEKREPDFSKFKRNP >gi|316919296|gb|ADCU01000010.1| GENE 31 35702 - 36475 473 257 aa, chain - ## HITS:1 COG:YPO2526 KEGG:ns NR:ns ## COG: YPO2526 COG0596 # Protein_GI_number: 16122745 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Yersinia pestis # 3 255 4 261 272 238 50.0 9e-63 MILAAHYLPVKIETAEHPTVVWLHGFLGSAEEWLELAVQLPNFAHLLVDLPGHGGSAEQS VADFAVVDASLRDTLKHYAISSYALIGYSLGGRVAMYHAVQDPAGLRALLVEGGNPGLKT QDERTARIEHDTRWAERFRSQPLREVLSGWYRQPVFAELNEAERECLVELRSAQMGEPLA AMLEATSLGKQPLLTPSLKTLAIPFVYLCGERDAKFQQLAVESDLPARIIADAGHNAHRA NPNEFVTQVLDFLTKHL >gi|316919296|gb|ADCU01000010.1| GENE 32 36472 - 38151 1368 559 aa, chain - ## HITS:1 COG:YPO2527 KEGG:ns NR:ns ## COG: YPO2527 COG1165 # Protein_GI_number: 16122746 # Func_class: H Coenzyme transport and metabolism # Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase # Organism: Yersinia pestis # 1 559 1 562 567 822 74.0 0 MSTSVFNRHWAALLLEALTRHGVRHICIAPGSRSTPLTLAAAANAQLICHTHFDERGLGH LALGLAKASGEPVAVIVTSGTAVANLYPALIEAGLTGEQLVMLTADRPPELIDCGANQAI RQNGIFASHPNQTLNLPRPTPDIPARWLASAVDSAMAQLSHGALHVNCPFAEPLYGDDDG SADAWSNGLGEWWQDSRPWLRETNVHARTTVKQLDWFYWRQKRGVILAGRMSAEEGERVA EWADLLGWPLIGDVLSQSGQPLPCADLWLANPKAQALLDQAQVVVQFGSSLTGKRLLQWQ ASCEPQEYWLIDPLEGRLDPAHHFGRRVISSISDWLVLHPAQPRTPWAPELEILADTAQQ CVTEYLDEHFGEAQVAQRIPELLPENGQLFVGNSLIVRLIDAFAQLPVGYPVYSNRGASG IDGLISTTAGVQRATAKPTLAIVGDLSALYDLNALALLRHSSAPTVLIVVNNNGGQIFSM LPTPEAERERFYLMPQDVDFQHAAAMFKLAYAQPQSWDALTDAVQQGWCRAGTTLIELQV SPSEGAETLRDLLAQVAAL >gi|316919296|gb|ADCU01000010.1| GENE 33 38411 - 39733 948 440 aa, chain - ## HITS:1 COG:YPO2528 KEGG:ns NR:ns ## COG: YPO2528 COG1169 # Protein_GI_number: 16122747 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Yersinia pestis # 1 438 1 449 455 466 57.0 1e-131 MVHLSALVERIIPLLRQAAAEQSGLVRVALPCSLKDGTQMLEWLASQPLFPQFYWRHRDG AEEAAVCGAVCTFTDAEQAQEFIRKNDCPELRIWGLNAFGQVELDGYGTINSLLFLPRIA LMRHAGKAELVVYLYGETSLQQDLDIALHDLADLCQIQPLPPLQTVVLAAHHQPEHDAWC NLLNHALVEIEHKAFEKVVLARRTTLKLSQPLRAAQFLSASRAVNHRCYHFMLALAPERA FLGSSPERLYRRQQLSLETEALAGTVASGSSDAQAQENAQWLMSDRKNQHENLLVVDDIC QRLQGGAQALDVMPAEVIRLRKVQHLRRPIHATLIHDNDADCLRRLQPTAAVAGLPREPA RQFIMRDEPFDRGWYAGSAGYLALEQAEFAVALRSALIQGDHIHLYAGAGIVAGSDPEQE WLEIENKAAGLRTLLETEFS >gi|316919296|gb|ADCU01000010.1| GENE 34 39961 - 40320 204 119 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDGLGVALFIWSFYLSVIYLIILSTVCLGALGGSLKCRHILLWIEAPQIASVVSFSAVMH WGYLYDGVVSVIVFSAAAMLFSLIVALLVSRWLGHPFHLWIVCHIIFITMLGSAITSVI >gi|316919296|gb|ADCU01000010.1| GENE 35 40461 - 40964 444 167 aa, chain - ## HITS:1 COG:no KEGG:EFER_1894 NR:ns ## KEGG: EFER_1894 # Name: ycdZ # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.fergusonii # Pathway: not_defined # 1 155 4 158 163 222 78.0 3e-57 MNVLVAIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGFGISFCTLLSG VFWAEVIIYGGALRPEWTIIGYILTGIVAFLMCIQAQQRWLAFVPGTFIGACATFAGNGD WKMVVPSLIVGLVFGYAMKNSGLWLAARKQNRVTQPTVETDNKSVSS >gi|316919296|gb|ADCU01000010.1| GENE 36 41277 - 42743 1357 488 aa, chain + ## HITS:1 COG:STM1094 KEGG:ns NR:ns ## COG: STM1094 COG4690 # Protein_GI_number: 16764452 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Salmonella typhimurium LT2 # 1 485 1 484 489 667 66.0 0 MKKHIIAALLPALIIPSAMACTTILVGDKASTDGSFLVARNEDYSANNPKHFLVHPRVEH QKGAFKSHANDFTYPLPETSLQYSAISDFDTNDLSMGEVGFNEAGVGMTATETIYNGQQV LKFDPYVEKTGITEDAIENVILPRIHSAREGVELLGKIIEEIGAGEGFGVAFVDQHEIWY LETGSGHQWMATKVPSDKYFVSANQGRLRTYVPDDTANYLGSKTLISFAEKHGLYNPKDG AFDFHKAYSQDVENDVTYNYPRVWTVQHLFNPSLKTEIKDGTAFPVFLQPEHKISVADVQ AALRNHYQGTSHDPYANANPKEPYRPISVFRTQESHVLQVRPNLPKAIGEIEYVAIGMPS LSVYIPYYQGLEHYLPGYDKGTDNASQDSVSWKYRTLQTLVMQNYNAYAPEVEKAYAEFE KNTATQQASMEKEYLKLYQAHPQQAQKVLQNFEDKVMADALALTNKLTQQVITQMTHDTD MKYHFEGA >gi|316919296|gb|ADCU01000010.1| GENE 37 42834 - 43739 521 301 aa, chain - ## HITS:1 COG:BS_yclA KEGG:ns NR:ns ## COG: BS_yclA COG0583 # Protein_GI_number: 16077430 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 1 273 1 272 290 107 26.0 2e-23 MDLKRLKYFCKVVEQGSISQAARVLNMAQPPLSKRIQELEEELNAPLFVRNGNRLETTDA GYYLYRKVCEILRQVEDTARETTKISNRETQILRIGLTHLFQNYFKPLLLELHRRYPEVE LNISVLDSSHLESHLNDSLIDIALIQKPRKTEGYDCLVFSPVPIVAVIAKKLLPEVPQSP FPYLELSQFPLVLLHRARDAGTYEILLDHFRKGGKEQRVIMQVTQPGVILDWLESGLEAA TLLPASEVDARKLSHCHVVDVFPSPMVFFPALVKTSMAPYTQEVMDIIKEGFPFKLSKEI K >gi|316919296|gb|ADCU01000010.1| GENE 38 43962 - 45461 1080 499 aa, chain + ## HITS:1 COG:MA0246 KEGG:ns NR:ns ## COG: MA0246 COG0043 # Protein_GI_number: 20089144 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Methanosarcina acetivorans str.C2A # 58 488 31 421 422 178 33.0 2e-44 MANNADNKIKNPIHDLRSALEFLKNQPGELVSTNVEVDPCAELSGVYRYVGAGGTCQRPT RKNGPAMVFNKIKGFDDISVVIGLNGSRKRVGHFLNCAPEKLGHLLKDSVKNAIQPVLVS ADKAVCQQVTHFAEDADFDLRKLLPAPTNTEEDAGPYITMGLCYASDPDTHESDITIHRL CVQSRDELSMWLTPGRHIDAFRMKAEAQGKALPISISIGVDPAIEIAACFEPPTTPLGFD ELSIAGALRGHAVEMVQCKTINEKAIAHAEIVIEGELLPNLRVREDQNTNTGKAMPEFPG YTGAAKDALPVIKVKAVTHRYHPIWRTTIGPGEEHVNMAGIPTEASILDMVERAMPGKLL NVFAHSAGGGKLLAVMQFKKSAPVDEGRQRQAALLAFSAFSELKHVILVDEDVDIFDSDD VMWAMQTRYQGDVDTVFIPGVRCHPLDPSQMPDYSPSILQEGMSCKTIFDCTVPFHLKAH FERSRFKELDVKRFLPDFE >gi|316919296|gb|ADCU01000010.1| GENE 39 45471 - 46058 390 195 aa, chain + ## HITS:1 COG:NMB1945 KEGG:ns NR:ns ## COG: NMB1945 COG0163 # Protein_GI_number: 15677775 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Neisseria meningitidis MC58 # 1 186 1 185 190 249 67.0 2e-66 MATQRIIIGISGASGFQYGVKALELLKDREDLEVHLVISKGAEKTCELETDYVLDEVMAL ADVVHPVTHLGASISSGSFRTLGMLVAPCSMRSLASIAHCMTDNLLTRAADVVLKERRRL VLLARETPLNLGHLRNMQLVTEMGGIIFPPVPALYQRPHGVDEIISHSVARALDLFGIEL NKIPRWGEGKLQHLA >gi|316919296|gb|ADCU01000010.1| GENE 40 46095 - 46811 658 238 aa, chain + ## HITS:1 COG:STM3115 KEGG:ns NR:ns ## COG: STM3115 COG1811 # Protein_GI_number: 16766416 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Salmonella typhimurium LT2 # 1 233 1 230 235 207 53.0 2e-53 MLIGPYVNGAAVIVGGLIGALAGHKIPLRVKTALPLTFGLCSVGLGINLVIKVKYMPAVV LAMVLGAVIGELIFLEKGIGKAAGSTRGIVNKYLPRVHGLSHEEFTEKFVAILVLFCASG TGIFGAMHEGMTGDPSILYIKTVLDLFTAGIFATMLGYAVMTIGIPLIIIQVALAMLAVF ILPMVTPEMMADFSCAGGLIMIATGLRICNIKPFPVANMLPGLILVMPFSWLWMTLVV >gi|316919296|gb|ADCU01000010.1| GENE 41 47125 - 47793 584 222 aa, chain + ## HITS:1 COG:mlr7067 KEGG:ns NR:ns ## COG: mlr7067 COG1335 # Protein_GI_number: 13475887 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Mesorhizobium loti # 5 220 3 219 222 242 54.0 5e-64 MTQHQFHAEPFALPFDPTTTALVMIDMQRDFVEPSGFGEALGNDVSRVRTAIEPCKRVLD AARTHGLLVIHTREGHRSDLTDCPPAKLTRGGKTFIGTEGPMGRILVRGETGHDIIPELY PISGEPVIDKPGKGAFYQTDLHLVLQNRGIKTLIVCGVTTEVCVTTTVREANDRGYECII PQDCVGSYFPEFQKYALEMIKAQGAIFGWVSDADSIIHGLQG >gi|316919296|gb|ADCU01000010.1| GENE 42 47816 - 48724 423 302 aa, chain + ## HITS:1 COG:no KEGG:ECP_4037 NR:ns ## KEGG: ECP_4037 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 34 301 23 283 286 221 46.0 2e-56 MTTHSLTITELKSVSIGYLAADFILGENVWPRRLQIHSRFQHALNLQRDDGYLLTLLCAS QYRNLADAIRLDLPMAWDWREHANNGNSRDVTLQENGMLLGAGWFIALENTPCWRPNIIT AGTDESPDNYAQHQYPTLVDALNRYCHKHNISSELALLPDISSMKRQPELSLNADTVTLN LQIAQLIGFGRGLTPDGDDYLLGYIASLWRWRNTPRVATHYARLCRGVAEQLERTNDISR QYLSRGVQGHFSEPICELIQALATAKSHSAISTAASRVMQFGASSGVDCLAGFLHGLRTL SN >gi|316919296|gb|ADCU01000010.1| GENE 43 48815 - 50365 1044 516 aa, chain + ## HITS:1 COG:ECs0369 KEGG:ns NR:ns ## COG: ECs0369 COG0074 # Protein_GI_number: 15829623 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 7 503 10 507 515 352 42.0 1e-96 MYKVFNNMYQDSVSLMQISAQICKLAGITQASVVMGTETNLAQLQDAGFPDPIKASPNDL IIAVMGETEACEQALEIAHQRLNSKPEESGSASMRTIAVTSLQMAQEQNASVNLALISVP GDYAAAEALKALELNMNVMLFSDNVSLQQEKQIKLLAQDKNLLVMGPDCGTAIINGLPLG FANVVKSGCIGVVGASGTGLQEVTCRIDQLGAGVSQAIGTGGHDLHEEIGGISMLFGLNA LAQDENTHVIVLISKPPARHVAEKILRQAQTCGKPVVVNFLGAEPAELISFGIHSAETLA DSADIAVALSQGKNSASTHLALTQSHLELLQQHAQHLSTTRKYIRGVFAGGTFCYESQLL CQKRGIFAYSNTPAHGNEKLNDIWRSNAHTLIDMGDDDFTRGRPHPMIDPTLRNQRIQAE LDDPNCAVVLFDLVLGYGATMDPAQELLQLLNQRDPQNSPLLVAHVCGTEADPQTRSLQI NALHQSGVLIAECNAQAALWASQIALIQAEKNGVTQ >gi|316919296|gb|ADCU01000010.1| GENE 44 50362 - 51789 1055 475 aa, chain + ## HITS:1 COG:no KEGG:c4765 NR:ns ## KEGG: c4765 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 467 18 484 491 720 79.0 0 MNALFCQPLEVANVGLTSFADNLKQAGGSVISLAWQPPAAGNIAAGLSLAALLNHPLVEQ ANQIAFARYLSAQPVLVDVLSAAEAIPALQLRKTILHSGPPIAWKNMCGPVQGAIIGAIL YEGWAPDAASAERLIDESQIALEPCHHYQAVGPMAGIISPSMPLWVIENTVNGQRALSNF NEGLGKVLRFGANSDEVLQRLRWMQHELAPALKAAVLRTGGLELKPLMAQALHMGDEIHN RNAAATGLLIKRLLPALLECNLPLAQLQRCVAFITSNDHFFLNLSMAACKSMMDAAANVP FSSMVTVMARNGVNFGIRLSGTGDNWYQAPANPVEGLFFPGYGVNDAAADLGDSAITETA GVGGFAMASSPAIVKFVGGTPDDATHNSRRMQAITVGSNPAFTLPALNFAPTAAGIDARK VADRGILPIINTGIAHKLAGVGQIGAGITTAPMSCFADALLALAKTLPDVEETHL >gi|316919296|gb|ADCU01000010.1| GENE 45 51786 - 52745 806 319 aa, chain + ## HITS:1 COG:PAB0593 KEGG:ns NR:ns ## COG: PAB0593 COG0549 # Protein_GI_number: 14521090 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Pyrococcus abyssi # 7 317 6 312 314 248 44.0 1e-65 MNKPLAIVAVGGNALIVNEEKNSIPDQYQAVEQSAQHIVDMIEGGWNIVLTHGNGPQVGF ILRRSELAASEVASVPLDYAVGDTQGAIGYMFQKALHNQLALRDIKKPVVTIVTQTLVSA SDPAFNTPNKPVGAFLDYATAQQRQQTLGWTIAEDSGRGWRRTVASPTPLEIIEIATIQN LLTQGCIVIACGGGGIPVIRDAQRQLHGIEAVIDKDLASALLAEQLAADLLLIPTGVDQV AINFGTPEQRWLSELSLEQADLLIAQGQFGSGSMQPKVEAIAQFIRQSHQNGKTASGLIT RPESIKAALSHQTGTWITR >gi|316919296|gb|ADCU01000010.1| GENE 46 52779 - 53168 486 129 aa, chain + ## HITS:1 COG:CC1830 KEGG:ns NR:ns ## COG: CC1830 COG0154 # Protein_GI_number: 16126073 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Caulobacter vibrioides # 6 122 469 588 594 79 33.0 2e-15 MTTTLLAVNGTLMRGLELNKNMTNAGGVFVREDHTDAHYRLWSINDCHPGMIRVQNGGVC VALELWQLPLSSFAELLSNEPAGLSIGKVKLQDGSEVLGVLAEPWLVEGQKEITELGSWR QYTGHHHIA >gi|316919296|gb|ADCU01000010.1| GENE 47 53224 - 54468 941 414 aa, chain + ## HITS:1 COG:BH1882 KEGG:ns NR:ns ## COG: BH1882 COG1457 # Protein_GI_number: 15614445 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Bacillus halodurans # 18 413 28 434 445 146 28.0 8e-35 MRKTEQTENATSTASGFHVAMILLGIAVTPVLLSSSSLGNQLSSANLISVVTIGGLILTI LAAVTICVGEKARLPTYGIVKYAFGERGAVAINILMAISLFGWIAVTANMFGHSVHDLLA QHGVDLPTPLWVTLGCMIFVASTAFGFAVLGKIAQIAVPVIALVLCYILYAATHGQAPML DSMNQMNTGVAVSTVVGTIIVLVATLPDFGSFVHNRKHALIAAGITFLIAYPLLYWAGAT PSALSGQGSLLSAMAVFGAVLPAALLLIFACITGNAGNMFQGTLVVSTLLTRFPKWQITL VLGLLAAIVGSMDIMAWFIPFLLFLGIATPPVAGIYIADFFLYRQNGYDETVLSNESQIK ICTFVAWLLGSAVGFMTVNDVMTLTTIPSIDSILVACVGYACLSRIQRKQMLVQ >gi|316919296|gb|ADCU01000010.1| GENE 48 54565 - 55470 480 301 aa, chain + ## HITS:1 COG:YPO2388 KEGG:ns NR:ns ## COG: YPO2388 COG0583 # Protein_GI_number: 16122611 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 4 296 3 295 310 199 33.0 7e-51 MFISDESIRIVHLVAKYQSITTAAEQLNKVPSAISYTVKKLEESIGVALFIRKGRNIELT PSGVYFIQNSKTILSDLDALKRNTTLIHDGVEQDFVIAANNIVPQSALVKFINTFELAFP STRLTLNIEVYNGCWDALYNKRADLVLGAPHNVPSSEGIISESLGVLEWDFVVSPQHPLA TLMKPLTNTELRQYPAICIRDTAVNFSHQQAWLLEGQKPLFVPDFTMAIALIQQNTGIGY IPHHLASPLLNEGTLVKKPMQEHKHATQLFMAVRSEGMGKVCKWCLDYLSESAIKNEICG K >gi|316919296|gb|ADCU01000010.1| GENE 49 55556 - 56059 585 167 aa, chain - ## HITS:1 COG:no KEGG:AHA_2521 NR:ns ## KEGG: AHA_2521 # Name: not_defined # Def: hydrogenase 2-specific chaperone # Organism: A.hydrophila # Pathway: not_defined # 12 167 18 173 182 193 64.0 2e-48 MTANPMTDAIGADEFWGFEHNPTKLLIEQYQHIAQQEMANLPFYRAEMPIKVEMQEYEGQ WLGTVLTPWMLSVVILPGPDQVWPRRALGERIALSLPRGDMTFMVGELPQTGQLLSCSLM SPIESHISAAEGEALASDTLKMLLSLPVQDQATPVSVSRRELFMRKR >gi|316919296|gb|ADCU01000010.1| GENE 50 56049 - 56543 507 164 aa, chain - ## HITS:1 COG:STM3146 KEGG:ns NR:ns ## COG: STM3146 COG0680 # Protein_GI_number: 16766446 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Salmonella typhimurium LT2 # 1 162 1 163 164 197 61.0 7e-51 MNTLVLGIGNLLLSDEAVGVRIVERLEQDYRFPEGVELMDGGTAGMELMEYMASRDHLIV ADAVLSDAAPGSVITLHDDEVPAFFSRKISPHQLGLCDVLSALHLTDEFPKRLTLVGVVP QSLEPYIGMTPTIEAAVPIAMDRIIQILREDGCTLEHRGVSHDC >gi|316919296|gb|ADCU01000010.1| GENE 51 56543 - 58246 1572 567 aa, chain - ## HITS:1 COG:ECs3879 KEGG:ns NR:ns ## COG: ECs3879 COG0374 # Protein_GI_number: 15833133 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I large subunit # Organism: Escherichia coli O157:H7 # 1 567 1 567 567 919 75.0 0 MSQRITIDPITRIEGHLRIDCEIENGKVTKAWSSGTMWRGMEEIVKGNDPRDAWMIVQRI CGVCTTIHAIASVRAVENAIGAEVPVNAQYIRNLIVAAHSIHDHIVHFYQLSALDWVDIT AALNADPKKCEAMLKGVSSWSLNSSEEFAKVQQKIRDLVASGQLGIFANGYWGHKAMKLS PEVNLIAVAHYLQALECQRDANRVVAILGGKSPHIQNLAVGGVANPINLDAPSVLNLERL MYVKMFIERLGEFIEQVYKVDAAIIAANYPEWLSLGEGAKHYLSVPELPTDAKGGSFLLP GGYIENGDMGNYRPITSHKDEWLIDGIAESCKHSWYKDDAILKPWEGKTEPNYTGWQDEG KYSWVKSPTFYGKVVEVGPLADLLVKLAAKHPDTVKHFNEVNGLYTTLNGKALQTEQLHS TMGRIIGRAVRCCVLKDTLLQQWQALIDNIGKGDHVAFIKPEILADKEYRGVGFEEAPRG MLSHWIVIKGGKIENYQAVVPSTWNSGPRNTNDEPGPYEQALIGTPIADIEKPLEVVRTV HSFDPCMSCAVHVVDTRGGEVTKVKVL >gi|316919296|gb|ADCU01000010.1| GENE 52 58243 - 59430 1186 395 aa, chain - ## HITS:1 COG:STM3148 KEGG:ns NR:ns ## COG: STM3148 COG5557 # Protein_GI_number: 16766448 # Func_class: C Energy production and conversion # Function: Polysulphide reductase # Organism: Salmonella typhimurium LT2 # 4 393 3 392 392 540 70.0 1e-153 MSEHKASPLGGRLVSWPVMVMAPFVVLCGIFILKRLIFGIGSVADLNGGYPWGLWISFDL LIGTGFACGGWALAWAVYVFNRGEYHPLVRPALLASLFGYSLGGLSITIDVGRYWNLPYF YLPGHFNTSSVLFETAVCMTVYIGVMALEFAPVVLEKFGWKVPMKWLNKIMFFILALGAL LPTMHQSSMGSLMIAAGNKIHPLWQSYELLPVFSLLTAFIMGFSIVVFEGSLVQAGLAGK GPNEKPLFYRLTQVIDIFLILFVALRFAEIVLRDKSEYLSQWNRYSISFWCEIGLMLFPL LVFHWDRFRRDSRMLFLGALSMLLGAALWRMNYSLLAFNPGNGYHYFPTSEEILISVGFV AIEVCAYLLLIRVLPVLPSLERVHKDYQARGKAKV >gi|316919296|gb|ADCU01000010.1| GENE 53 59423 - 60403 833 326 aa, chain - ## HITS:1 COG:ECs3881 KEGG:ns NR:ns ## COG: ECs3881 COG0437 # Protein_GI_number: 15833135 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 326 1 327 328 525 76.0 1e-149 MNRRNFIKFASAGALAAGTVTSGTAHAVENKPPIPGAVGMLYDSTLCVGCQACVAECQRL NKNQINPNGPQTWSDNDKLTPYTNNIIQVWSDGSGVNKDQVENGYAYIKKQCMHCVDANC VSVCPVQALRKDPKTGIVHYDPDVCTGCRYCMVGCPFDVPKYDYHNPFGEIHKCQLCDQK GLERITKGQLPGCVEVCPTGAVIFGTREDLLAEAKKRLAAKPGMEYAYPRQTLTGGDNYL HPLANYQPYVYGEKEGGGTQVLVLAGVPYENLGMPKLAELSTGARSEHIQHTVYKGMILP LVVLTGLSVLIRRNTKNHHDGDDDNE >gi|316919296|gb|ADCU01000010.1| GENE 54 60406 - 61560 746 384 aa, chain - ## HITS:1 COG:STM3150 KEGG:ns NR:ns ## COG: STM3150 COG1740 # Protein_GI_number: 16766450 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I small subunit # Organism: Salmonella typhimurium LT2 # 2 369 3 370 372 554 75.0 1e-157 MAEDNFLSAHGVNRRDFMKLCAGMAATLGLSSNAAAEMAAAITDPQRPPVIWIGAQECTG CTESLLRATHPTIENLILNTISLEYHEVLSAAFGHQAEENKHNAMKRYKGKYVLVVDGSI PLKDGGVYCMVAGEPIVDHIRRAAADAAAVIAIGSCAAWGGVPATGGNPTGAVSLEEAIG KPVINIPGCPPNPHNFLTTVVYYITYGKLPALDSKHRPLFAYERLIHENCERRPHFDAGR FAKEFGDYGHRQGWCLYHLGCKGPETYGNCSTLEFCDIGGGIWPVGIGHPCYGCNEQGVG FTKGIFQLANVENPTPRVDKPAVDNREGGHISPTATGLIGGALGILIGVSLMTVRELGRQ QKRHESERKNAEKSHSEHHDSRGE >gi|316919296|gb|ADCU01000010.1| GENE 55 62535 - 64904 1965 789 aa, chain - ## HITS:1 COG:YPO0848 KEGG:ns NR:ns ## COG: YPO0848 COG1501 # Protein_GI_number: 16121156 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Yersinia pestis # 1 783 2 784 792 1293 76.0 0 MKTLKNWVLNHQAADHVELKVDDQHLFRIYVLESGLFRVLIKQRGELALNRTWSIAPQAD VPWEGRDRESTEGFTLPAFELEQTDNGLRISTDRMRVSVNQPLWLQWEYRNEAGEWQLLA ADRPTSAYLLNAHGDGVAHYQRRFPTESYYGLGEKAGDLNRTGGRYEMRNLDAMGYNAAS TDPLYKHIPFTITHRDDVSFGLFYDNLSSTMLDLGNELDNYHLAYRRYQAEAGDLDYYIF VGPKVLDVTKAFVRLTGRTLFGPKWSLGYSGSTMHYTDAPDAQNQLMKFIELCREHDIPC DSFQLSSGYTSINHKRYVFNWNYDKVPQPKVMSQAFHDAGLKLAANIKPCLLQDHPKYQE VAQQGLFIRDSESDNAERSVFWDDEGSHLDFTNPATVKWWQDNVTQQLLEMGIDSTWNDN NEYEVWDGEARCHGFGEEIAIKQIRPVMPLLMMRASLEAQQRFAPQQRPYLISRSGCAGM QRYVQTWSGDNRTSWQTLRYNTRMGVGMSLSGLYNVGHDVGGFSGDKPDAELFVRWVQNG VMHPRFTIHSWNDDHTVNEPWMYPAVTPAIRDAIVLRYRLLPYFYNLLWQACENDEPMLR PTFLDHENDAATFAETDDFMLGKDLLVASVVEQGQRLRDVYLPANESGWYDFYTGQWFSG GQTITVDAPLERLPLMVRAGAMLPISGRTAFVDSSADDSRELLLFPPMGKGKDKGLLFED DGETHAWREGHALWLNWEITADNQRIDVNFTRKGDFRPAWKEITLRLPAGETRQLYVDGV EGDCYQVGV >gi|316919296|gb|ADCU01000010.1| GENE 56 64937 - 66289 1190 450 aa, chain - ## HITS:1 COG:YPO0847 KEGG:ns NR:ns ## COG: YPO0847 COG0477 # Protein_GI_number: 16121155 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 16 446 1 430 435 659 80.0 0 MCQTSVCCYRDQGITMSLDMNQPAVAVKGKRKIKNLRWWMLALFLLGVTVNYITRNSLGI LAPELKTSLGMTTEQYSWIVGAFQIAYTVFQPLCGWLIDVIGLKLGFLICASIWALMCML HAGAGSWMQLAILRFFMGGAEAAATPANAKTIGEWFPKKERPIAAGWAGVGFSIGAMLAP PIIVIAHASFGWQGAFMFSGVLAMLWVILWWLFYHNPDKHPNLSSSELQYIKQDNEPAPV KLPFFKALATVSKNKRFYGIALPAFMAEPAWAVLSFWVPLYLANERGMDLKQIAMFAWLP FLAADLGSVASGYLTRIYAKLFGTSRVNSIVASSVTGAFLMLSLALVAITQDPYITIALI SVGGFGHQVISCMLSALVVESFDKGQMATVNGMRGSFAWIASFLFSLLIGVTADKIGYNP LFIAMGFFDLIGAVFLIAFIAERRQKTHQA >gi|316919296|gb|ADCU01000010.1| GENE 57 66575 - 67645 752 356 aa, chain + ## HITS:1 COG:YPO0846 KEGG:ns NR:ns ## COG: YPO0846 COG1609 # Protein_GI_number: 16121154 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 356 1 359 360 442 60.0 1e-124 MNGKLKIREIAAQTGLSISTVSRVLSGKSNTSESAKQQILAAARQHGVLDDISTGRMLLN GLVVFAPQRAFDVRSDIFYYKVIQGIAQALEPHEVRLRYCSLEENDNDVSLFLQKMNEPA TEAAILIGIDDPYIHSLAADLGKPCILVNCRDRKMRLPGIAPDHQMIGAFSANYLFEQGH RHILSLLCLRRYTMELRLAGIREAYQTNNLPFNEETALLSTPSFGATDAELAVKQFLAHR PAEHRPTAILAGGDYMAVGAVNALLNAGLRVPQDISVMSMDGFNLAAIHDIPLTSVHVPR DELGEEAVRMLQRRLMQPNTPVGNLLLNGTLVIRDSVRRIRTSQNQALVQKDSLYD >gi|316919296|gb|ADCU01000010.1| GENE 58 67752 - 70070 2174 772 aa, chain + ## HITS:1 COG:bglX KEGG:ns NR:ns ## COG: bglX COG1472 # Protein_GI_number: 16130070 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Escherichia coli K12 # 1 772 1 765 765 1254 80.0 0 MKWLCSLSLVAGLIATTLSPVYADATQPAHPLVKPQSTQQRDAFVTDLLSKMTLDEKIGQ MRLISVGPDNPKEAIREMIKQGQVGAIFNTVTRQDIRKMQDQAMQLSRLKIPLFFAYDVV HGQRTVFPISLGLASSWNRDAVTTVGRISAYEASEDGLNMTWAPMVDVTRDPRWGRTSEG FGEDTYLTSEMGRLMVEAMQGNNPADRNSVMTSVKHFAAYGAVEGGRDYNTVDMSPQRLF QDYMPPYKAALDAGSGGVMVSLNSINGTPATSNSWLLKDVLRDEWNFKGITISDHGAIKE LIKHGVASDPEDAVRVAVKSGIDMSMSDEYYSKYLPSLVKSGRVSEKEVDDAARHVLNVK YDMGLFTDAYSHLGPVGSDPVDTNAESRLHRPEARSVARESMVLLKNRLNTLPLAKSGTI ALIGPLADSKRDVMGSWSAAGVVDQSVTVLQGLRNAVGDKAQIVYAKGANVSNDPGITDF LNLYEKAVTVDPRSPQAMIDEAVATAKKSDVIVAVVGEAQGMAHEASSRSDITIPQSQRD LIAALKQTGKPLVLVLMNGRPLALEKEDQQADAILESWFSGTEGGNAIADVLFGDYNPSG KLPMSFPRSVGQIPIYYSHLNTGRPYNPEKPEKYTSHYYDAANGPLYPFGYGLSYTTFSV SDVKMSSPIMKRDGSVTASVTVKNTGKRDGATVVQLYIQDKTATMSRPVKELKGFEKVML KSGEQKTIHFKIDENQLKFWNASMKYVSEPGKFNVFIGLDSQRVNQGEFELL >gi|316919296|gb|ADCU01000010.1| GENE 59 70042 - 70170 63 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGWNKAISSYVSEVFLSVSGWKLVQAFHRYFLYFTAAQILPD >gi|316919296|gb|ADCU01000010.1| GENE 60 70420 - 71277 98 285 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDNKNTDVIDDVNDSSKGVSGAETNIIPKKINRAIKNGWQAGIVIFVLTLCLFVYQWIVF KASWWDLADVAIYLLLSYGVYRRSRTCAILMLLLYILSQAIAPKLYYIGNVRTEYHFNIL LIILITGFSYGVVGTVGFHRWRKGKSFNDKKITKYMFACAVVSFLLFFGMMKGTEWMMHR ITPAQWAAVDEDISKTKSAYPLKLNDEITVKDIYRNNNVLTYEYILTNVKKEDFTRLNAY RLSLSAFKNMCNQPIVQLYNMKVEYLFTRDLDQISLTFDKGDCPH >gi|316919296|gb|ADCU01000010.1| GENE 61 71379 - 72986 1353 535 aa, chain - ## HITS:1 COG:ygiS KEGG:ns NR:ns ## COG: ygiS COG4166 # Protein_GI_number: 16130916 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 7 535 7 535 535 778 71.0 0 MKILTPLWLVSLISVAPLYAAQIPAGTTLAPQQVFRYNNHSEPSTLDPQKIEENTAAQVA FDLFEGLVWLDGNGNVQPAQAKSWKISDDGKQIVFTLRENLRWSDGSPLTAEDFVFAWQR AVDPATGSPFADYLAAGHVVNAAHIVSGKISPQQLGIKAVDARTLQVDLEQPTPWFISML AWPTTFPVPHTVVQKYGEDWARPEHLISNGAFVLANRVVNEKIVAKPNPQYWNRAETVLT QVEYLVVDNAVSGYNRYRAGDLDLTWVPADQIKDIQQKMPDELHIIPRLNTEYYNFNTSM PPFNDVRVRRALYLTVDRDLIAHKVLGLREPATTLTPPQVTGFKPPVLDELNEPLAQRVI LAKGLLHQAGYDEQRPLKFELFYNKYDLHEKTAIALSSEWKKLLGVQVTLRNMEWKTYLD ARRAGDFMLSRQSWDATYDEPSTFLNTLQSTSVENVGHWSDAEYDRLLKQAESVADPVTR NVLYSQAELRINQQAPIIPIYYQPLIKLLKPYVGGFPVHNPQDYIYSKELYIVAH >gi|316919296|gb|ADCU01000010.1| GENE 62 73147 - 74496 985 449 aa, chain - ## HITS:1 COG:VC0650 KEGG:ns NR:ns ## COG: VC0650 COG0534 # Protein_GI_number: 15640670 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Vibrio cholerae # 1 437 1 437 445 328 43.0 1e-89 MLHQSITRTFWHYSIPAIAALLISGLYQIVDGAFIGHAMGAEGLSAINMAWPLSGVLLAV GMMIGMGSGARCSLAQGEEKIDKARRILMQVFWLLIALGIGVGSCVAYMAPLFMRMQDAS GIIENYGIDYLTIVGISGPIVLGSIAMPLLVRNLGAPRLATFAMLVGALMNVLLDYIFII RLGWGLKGAALATITSESLAVLICIGFIFSRYNKLRPQRSHIAFNLRLSLASLTTGFSSM LMYLYLSVVVMLHNLLFMKYGGPVEVAAYGIASYLIGFYYLLAEGVCGGMQPLVSYYHGA RQPEKVRKVLSLGLMTAVGGGIILALAIFILPSLFASIFISGDNVLRSATIHGLRLHLFV MFLDGFIVLAATFFQALGYARYATFITLSNMLILFPFLALFPWIFGLNGVWLAMPLSNIC LSVVVILMLKRQLRRLGISLSSKQKPLAS >gi|316919296|gb|ADCU01000010.1| GENE 63 74539 - 74958 275 139 aa, chain - ## HITS:1 COG:VC0649 KEGG:ns NR:ns ## COG: VC0649 COG1846 # Protein_GI_number: 15640669 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 4 132 9 137 139 82 35.0 3e-16 MINDLKKLQWHLWFCWREVSRQSGSMELTNSEFDYLYALLEHPQGVRLTELAECMKVSKA SASAMVSKLESRGYIQRVPCSDDGRATLLQVTKKGTALEKEEMDIYAETAQKMASALTPE ERQQFELLLHKACHGLNTD >gi|316919296|gb|ADCU01000010.1| GENE 64 75357 - 76028 700 223 aa, chain + ## HITS:1 COG:YPO2972 KEGG:ns NR:ns ## COG: YPO2972 COG1462 # Protein_GI_number: 16123153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in formation of curli polymers # Organism: Yersinia pestis # 1 223 1 223 223 359 86.0 2e-99 MMKKILIATTLSLATFLSGCASESSRSLEVAKVASYGTQYNGPRSPISVGKFDNRSSYMN GIFSDGVDRLGNQSKTILVTHLQQTGRFNVLDRTNMAELKEEAGIKGQTQTLKGATYVIT GDVTEFGRKETGDHQLFGILGRGKSQVAYAKVNLNVVNVQTSEVVFSSQGAGEYELSNRE IIGFGGTASYDSTLNGKVLDLAIREAVNNLVTGIQNGAWQPAQ >gi|316919296|gb|ADCU01000010.1| GENE 65 76055 - 76414 337 119 aa, chain + ## HITS:1 COG:YPO2971 KEGG:ns NR:ns ## COG: YPO2971 COG4259 # Protein_GI_number: 16123152 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 12 119 12 118 118 160 75.0 6e-40 MKFVRHSGLLLAVALLAGCATAPKPLYNWDNYQSTIYQYYQLGETGPEQQIATLKASIEK SRSKGLPVPPGLHAHLGMLYSNTGQMDLAMAEFEAEKAQYPESATFMDFLSRKNKGAMK >gi|316919296|gb|ADCU01000010.1| GENE 66 76411 - 77067 507 218 aa, chain + ## HITS:1 COG:YPO2970 KEGG:ns NR:ns ## COG: YPO2970 COG4380 # Protein_GI_number: 16123151 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 218 1 218 218 325 75.0 4e-89 MKYLLALCGLISALLLTGCVSPVKHDYSAFKQSKPKSILVLLPQNQSPDITASHGLLSQV TFPLAEAGYYVFPVAVVEETFKQNGMTNAGDINAASPAKLRQIFGADAVLYLTVTQYGTS YQVISSDTRVSATAKLVDLRDGKTLWSGSATASSTENDDNSGGLLGMVVTAMINQVSNTL NDKSHDIAGITSVRLLSAGTPNGILYGPRSPQYGKDAQ >gi|316919296|gb|ADCU01000010.1| GENE 67 77144 - 77698 456 184 aa, chain - ## HITS:1 COG:all1011 KEGG:ns NR:ns ## COG: all1011 COG0110 # Protein_GI_number: 17228506 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Nostoc sp. PCC 7120 # 7 184 15 192 192 163 44.0 1e-40 MRAFDLMTSGKEYFINDDELREIRYVTRDRVDAFNALSARNVMEKNRLITDIFAQVGENV HIEKGLRVDYGCNTYFGSNVFINFNFVILDCARVTIGDNVFIGPDVQLYTAQHPLAIDSR NAHIGSAQPVTIGSNVWIGGGCIILPGVTIGDGVTVGAGSVITRSIEANVVACGNPCRVH KVLS >gi|316919296|gb|ADCU01000010.1| GENE 68 77888 - 79360 1582 490 aa, chain - ## HITS:1 COG:YPO2543 KEGG:ns NR:ns ## COG: YPO2543 COG1007 # Protein_GI_number: 16122761 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Yersinia pestis # 1 490 1 487 487 660 80.0 0 MTITPQHLIALLPLLIVGLTVVVVMLCIAWRRNHFVNATVTVIGLNLALLSLYFVGQLLS ATDGSLSVTPLFRIDSFSMLYIGLVLLSSLATSTFAYPWLQGYPDNRDEFYLLVLIATLG GIVLACANHLAALFIGIELISLPLFGLIGYAYRQKRSLEAAIKYTILSAAASSFLLFGMA LLYAESGDLSFVGLGKSMSDSMLHEPLLLAGLGLMLVGFGFKLSLVPFQLWTPDVYQGAP APVSTFLATASKIAIFAVLMRLFMYAPVTNSETVRLVLGIIAFCSILFGNLMAITQSNIK RLLGYSSVSHLGYLLVALIAVQSQQISAEAVGVYLAGYLFASLASFGVVSLMSSPYSGPD AESLFSYRGLFWHKPILSAVMTVSMLSLAGIPMTLGFIGKFYIISVGVSAHLWWLTGAVV VGSAIGLYYYLRVAVSMYLHAPETLVRDTPNNWALTAGGVVVLISGILVVLLGIFPQPLI SLVQMAQPIL >gi|316919296|gb|ADCU01000010.1| GENE 69 79367 - 80905 1475 512 aa, chain - ## HITS:1 COG:YPO2544 KEGG:ns NR:ns ## COG: YPO2544 COG1008 # Protein_GI_number: 16122762 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Yersinia pestis # 1 512 1 510 510 817 89.0 0 MLLPWLILIPFIGGFLSWQSERFGTKAPRWIALIAMGLTLVLSLQLWLQGGYSLTQAAGI PQWQSEFSIPWIPRFGIEFHLALDGLSLLMVVLTGLLGVLAILCSWNEIQKYQGFFHLNL LWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHKASDGKTRISAATKFFIYTQS SGLIMLIAILGLVFVHYNATGVWTFNYEELLNTPMSHNVQYLLMLGFFIAFAVKMPVVPL HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPEASHEFAPIAMWLGVIGIFY GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYSGNQLAYQGAVIQMIAHGLSAAGMFIICG QLYERLHTRDMRLMGGLWGRIKYLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV ITIISTFGLVFASVYSLIMMQRAYYGAPKSDKPLPGMSARELSIILLLVVLLVALGLYPQ PILDTSSAAMTNVQHWFSSASTLQSLSTTTRP >gi|316919296|gb|ADCU01000010.1| GENE 70 80994 - 82841 1611 615 aa, chain - ## HITS:1 COG:YPO2545 KEGG:ns NR:ns ## COG: YPO2545 COG1009 # Protein_GI_number: 16122763 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Yersinia pestis # 19 614 19 614 614 931 87.0 0 MNLLYLTILLPLIGFLLLAFSRGRWSESTSAIIGVGSIGLAALVTAYVGFDFLSQKADGV QVFNQHLWNWMAVGDFGIPITLTLDGLSLTMLSVVTGVGFFIHMFASWYMRGEEGYSRFF AYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTNPANGAAAMKAFIVTRVG DVFLAIGLFILYNELGTLNIRELMILAPQKLEVGSAAITWATLMLLGGAVGKSAQLPLQT WLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMAPEILHLVGIVGAVTLVLAGFA ALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLSSGSVILACH HEQNIFKMGGLRKSLPLVYICFLVGGAALSALPIVTAGFYSKDEILWGALASGHINLMTA GLVGAFLTSLYTFRMIFIVFHGEAHTKAHAGKGIAHSLPLIVLLVLSTFIGALITPPLAG VLPESHSGEAGKMTLEIISGVVAIVGILLAAVLYLGKRQFVNSVAQSAPGRFFSTWWFHA WGFDWLYNMIFVKPFKAVAYLLQRDPLNSLMNLFAVFARWGNRGLAVSENGQLRWYMASM GVGAVVVLALLLLVK >gi|316919296|gb|ADCU01000010.1| GENE 71 82838 - 83140 460 100 aa, chain - ## HITS:1 COG:ECs3163 KEGG:ns NR:ns ## COG: ECs3163 COG0713 # Protein_GI_number: 15832417 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Escherichia coli O157:H7 # 1 100 1 100 100 137 93.0 5e-33 MIPLQHGLILAAILFVLGLTGLLIRRNLLFMLISLEIMINAAALAFVVAGSYWGQADGQV MYILAISLAAAEASIGLALLLQLHRRRNTLNIDTVSEMRG >gi|316919296|gb|ADCU01000010.1| GENE 72 83137 - 83715 660 192 aa, chain - ## HITS:1 COG:STM2320 KEGG:ns NR:ns ## COG: STM2320 COG0839 # Protein_GI_number: 16765647 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Salmonella typhimurium LT2 # 1 192 1 184 184 236 72.0 2e-62 MEFAFYIAALVAVVATIRVISHTNPVHALLYLIVSLLAVAAVFFSLGAYFAGALEIIVYA GAIMVLFVFVVMMLNLGNSVVEQERAWLKPSLWIGPSLLSLILLAVLVYAIMSVNDQGIS GDMIDAKAVGIALFGPYVLAVELVSMLLLAGLVVAFHIGREHKQGEVFSKTPETEANKAK AMAVKNKAEERA >gi|316919296|gb|ADCU01000010.1| GENE 73 83726 - 84268 700 180 aa, chain - ## HITS:1 COG:STM2321 KEGG:ns NR:ns ## COG: STM2321 COG1143 # Protein_GI_number: 16765648 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Salmonella typhimurium LT2 # 1 180 1 180 180 362 96.0 1e-100 MTLKELVVGFGTQVRSLWMIGLHAFAKRETQMYPEEPVYLPPRYRGRIVLTRDPDGEERC VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF ELGEFKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKAKGEAENEAKPIDVKGLLP >gi|316919296|gb|ADCU01000010.1| GENE 74 84283 - 85260 892 325 aa, chain - ## HITS:1 COG:ECs3166 KEGG:ns NR:ns ## COG: ECs3166 COG1005 # Protein_GI_number: 15832420 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Escherichia coli O157:H7 # 1 325 1 325 325 551 89.0 1e-157 MSWLTPEVIDILLTVLKAIVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQL VADMVKMFFKEDWVPRFSDRLIFTLAPMIAFSSLLLAFAIVPVSPTWMGADLNIGILFFL MMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSVMGVVAQADSFNMQTIV ESQSHLWNVIPQFFGFLTFIIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG EYIGIVTVSALIVTLFFGGWQGPFLPPVIWFAIKTAFFMVMFILVRASLPRPRYDQVMSF GWKICLPLTLLNLLATAAVILYNAQ >gi|316919296|gb|ADCU01000010.1| GENE 75 85257 - 88007 2697 916 aa, chain - ## HITS:1 COG:YPO2550 KEGG:ns NR:ns ## COG: YPO2550 COG1034 # Protein_GI_number: 16122768 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Yersinia pestis # 1 908 1 911 914 1570 81.0 0 MATIHVDGKEYEVNGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTR GRLVMSCMTPAQDGTFISIDDAEAKTFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVM TGHSFRRYRFTKRTHNNQELGPFISHEMNRCIACYRCVRYYKDYADGTDFGVYGAHDNVY FGRPESGTLESEFSGNLVEVCPTGVFTDKTHSERYNRKWDMQFAPSVCQQCSVGCNTSPG ERYGEIRRIENRYNGTVNHYFLCDRGRFGYGYVNLKDRPRQPQQRRGNDWIHLNAEQAMQ GAADLLRQAKKTIGIGSPRASLESNYALRELVGAENFYSGIEAGELSRLNLMQKILREGG VYTPALREMESYDAVLILGEDVTQTAARIALALRQAVKGKARAMAAAQRVADWQIAAIQN IGQRAKYPLFMTSIDDTRLDDVAALNYRAPVADQARLGFAVAHALDNSAPAVDGLSDDVR KQVDVIVQALAGAKKPLIVTGSNAGYTPLIEAAANIAKALKTRDLDVGITFIASEANSMG LAMMNAPSIDDALAELEQGSADAVVVLENDLYRHAPAARVDAALAKAQSVIVVDHQRTAI MDKADLVLSAASFAESDGTLVNQEGRAQRFFQVYDPAYYDDPKKNTPSIMLESWRWLHSL HTTVESRQIDWTLLDHVIASCVKAYPQLQGIVDAAPDATFRIKGQKLAREPHRYSGRTAM RANISVHEPRQPQDKDTAFAFSMEGYSGPLEDRQQIPFAWAPGWNSPQAWNKFQAEVGGH LRHGDPGVRLIAAGEGSLAYFDAVPAAYHNAGWVVAPYYHLFGSDEMTQRSPVIQTRMPE AYVMVNPADAAQLGVNNGTLLELTFADQKLTLPARLSENLQSGQIGLPLGLPGISPVLNG TKVDAIQETKVREAAL >gi|316919296|gb|ADCU01000010.1| GENE 76 88041 - 89402 1351 453 aa, chain - ## HITS:1 COG:YPO2551 KEGG:ns NR:ns ## COG: YPO2551 COG1894 # Protein_GI_number: 16122769 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Yersinia pestis # 11 453 13 461 461 829 88.0 0 MTIPSALFPTRSAESHPLTWRLRDDKQPVWLDEYRSKSGYQGAEKALKGMAQDEVVNLVK DAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQMPHLLVEG MLIAAFALKSYRGYIFLRGEYVEAAVNLRKAIEEAKAAGLLGKNILGSGFDFELFVHTGA GRYICGEETALINSLEGRRANPRSKPPFPASSGVWGKPTCVNNVETLCNVPAIIEHGVDW YKGLSAGKSEDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLTLKAWQPG GAGTDFLTGDHLDLPMDFASIGKAGSRLGTALAMAVDNEIGMVPLVRNLEEFFARESCGW CTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRHLGPGKTFCAHAPGAVEPLQSAIK YFREEFEAGIAAKDYGNLNAIKGIQPNLLKSRW >gi|316919296|gb|ADCU01000010.1| GENE 77 89399 - 89899 469 166 aa, chain - ## HITS:1 COG:STM2325 KEGG:ns NR:ns ## COG: STM2325 COG1905 # Protein_GI_number: 16765652 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Salmonella typhimurium LT2 # 1 166 1 166 166 293 83.0 8e-80 MSDQSLAKEEVFVLSDSAREAIEHEKHHYEDPRAASIEALKIVQKEHGWVPDGAIYAIAE VLDIPAADVEGVATFYSQIFRQPVGRHIIRYCDSVVCHINGYQGIQAALERKLNIKPGQT TFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPENVVELLEQYK >gi|316919296|gb|ADCU01000010.1| GENE 78 89902 - 91713 1762 603 aa, chain - ## HITS:1 COG:YPO2553_2 KEGG:ns NR:ns ## COG: YPO2553_2 COG0649 # Protein_GI_number: 16122771 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Yersinia pestis # 206 603 1 398 398 822 96.0 0 MTDSTTQDLNLPLSEGKEWQTRDHLDDPVIGELRNRFGPDAFTVQPTRTGMPVVWVKREQ LLEVMSFLKKLPKPYVMLFDLHGMDERLRTHRQGLPEADFSVFYHIISIERNRDIMLKVA LSEKDMHLPTVTKIFPNANWYERETWEMFGMTFDGHPHLTRIMMPQSWEGHPLRKDYPAR ATEFDPFELTKQKQDLEMESLTFKPEDWGMKRSTENEDFMFLNLGPNHPSSHGAFRIVLQ LDGEEIVDCVPDVGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAG IEVPERVKVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKVYDVVEAITGF RMHPAWFRIGGVAHDLPRGWERLLRDFLDWMPKRLDSYVKAALKNTILKGRSVGVAAYNA KEALDWGVTGAGLRATGIEFDVRKWRPYSGYENFDFEVPVGHNGDCYDRVMLKVEELRQS LRILEQCYKNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMV EATKGINSYYLTSDGSTMSYRTRIRTPSYAHLQQIPAVIRGSLVSDLIVYLGSIDFVMSD VDR >gi|316919296|gb|ADCU01000010.1| GENE 79 91823 - 92497 534 224 aa, chain - ## HITS:1 COG:YPO2554 KEGG:ns NR:ns ## COG: YPO2554 COG0377 # Protein_GI_number: 16122772 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases # Organism: Yersinia pestis # 1 224 1 225 225 444 93.0 1e-125 MDYTLTRIDPDGENDRYPLQKQEIVTDPLEQHVHRSVYMGKLENALHDMVNWGRKNSLWP YNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADFMVVAGTCFTKMAPVIQRLYDQ MLEPKWVISMGSCANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI GKERRPLSWVVGDQGVYRANMPSEKERKRAERIAVTNLRSPDEI >gi|316919296|gb|ADCU01000010.1| GENE 80 92546 - 92986 350 146 aa, chain - ## HITS:1 COG:YPO2555 KEGG:ns NR:ns ## COG: YPO2555 COG0838 # Protein_GI_number: 16122773 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 3 (chain A) # Organism: Yersinia pestis # 1 146 1 146 164 238 85.0 2e-63 MSTTTEVIAHHWAFAVFIIVALGLCGVMLLGAYALGGRARARAKNTPYESGIDSVGSARL RLSAKFYLVAMFFVIFDVEALYLYAWSVSIRESGWVGFIEAAIFILVLLAGLFYLVRIGA LDWTPARSKRRVEHESTVTNTDSRPQ >gi|316919296|gb|ADCU01000010.1| GENE 81 93669 - 94628 611 319 aa, chain - ## HITS:1 COG:YPO2556 KEGG:ns NR:ns ## COG: YPO2556 COG0583 # Protein_GI_number: 16122774 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 314 1 310 310 410 67.0 1e-114 MINTHRPTINLDLDLLRTFVAVADVKTFAAAAIVVQRTQSAVSQQMQRLEQLVGKELFAR HGRNKQLTEHGVQLLGYARKILRFNDEACSSLIYNHLHGSLIIGATDDTADTILPFLLSR FTSLYPKLEIDVRVKRSPDMRQLLKDREIDLAITTMGFDEFSYETLRRSPTVWFCATDYD YQAGEPVPLVVLDEPSPFRALAIKHLNEAGIPWRIAYVASTLSAVRAAVKAGLGVTARPI EMMSPELRVLGVSERLPKLPETEYSLCLAPNCTNELATILFSSLKAGSEPYIENAPNIDL AVEQGSAYSTGPTDPADVA >gi|316919296|gb|ADCU01000010.1| GENE 82 94990 - 95673 257 227 aa, chain - ## HITS:1 COG:ydjZ KEGG:ns NR:ns ## COG: ydjZ COG0398 # Protein_GI_number: 16129706 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 35 218 42 225 235 192 61.0 4e-49 MFKHRQACILFLLCLMVAGMLWFDSPRQLLWHWWALFSSLDVSAMMEYLRSFGPWAMVVS FLLMIFQALAAPLPAFLITFANAALFGWWQGALLSWFSAMVAAWICFILARWVGRETLEK FVSSEALTRSDLFFARYGKHTILICRLLPFVSFDIISYAAGLTSIKVRGFLIATGIGQLP ATLVYSYVGGMLTGGAQLLVTGLLITFSISVVFFALKKKKLFQGNNS >gi|316919296|gb|ADCU01000010.1| GENE 83 95833 - 97146 1127 437 aa, chain + ## HITS:1 COG:ECs2463 KEGG:ns NR:ns ## COG: ECs2463 COG2897 # Protein_GI_number: 15831717 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli O157:H7 # 1 435 6 439 440 648 75.0 0 MKVTSQLVTSALLLGWLQMAHAADATPLKHIKLDDLQSGNGAIVDTRPSAFYNGWPQGLN GPSGHEPRAFNLSVNWLSLMSDEQLQQWASQHQITPDRKIALYGTTEQTSEVSKRLMKLG YINIATLSDALSQPDRLQRMAHYEQLVYPQWIHDLQQGKNVVAKPAGEWKVIEAAWGAPK KYLLSHIPGAGYIDTNDIESEPLWNKVSDDKLKALLAKQGIKHDTTVILYGRDVYAAARV AQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGLPSNVKPAPDFGAEIPGQPQLMLNEEQA RGLLHRKDASLVSIRSWPEFIGETSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGT MRSADDIAAMWKEWHITPDQQVSFYCGTGWRASETFMYARAMGWPSVSVYDGGWYEWSAN PKNPVVAGERGPESSWE >gi|316919296|gb|ADCU01000010.1| GENE 84 97482 - 98111 383 209 aa, chain - ## HITS:1 COG:ynjF KEGG:ns NR:ns ## COG: ynjF COG0558 # Protein_GI_number: 16129712 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Escherichia coli K12 # 1 205 3 207 208 262 69.0 3e-70 MFDRYLHPRVKPLLNRIAATIDRPEVTPDRISLVGFLIGALALPFLAMQWYFAALLMIVI NRLFDGLDGALARRRDLSDAGGFLDIALDFLFYALVPFGFVLASPTLNAVAGAWLLFAFI GTGSSFLAFAAVADKYKLENLDYPHKSFYYLGGLTEGAETILVFVLFCLFPAYFPLLAWL FGALCWFTTLTRVWGGYHTLRRVAQARGE >gi|316919296|gb|ADCU01000010.1| GENE 85 98104 - 98694 292 196 aa, chain - ## HITS:1 COG:ynjA KEGG:ns NR:ns ## COG: ynjA COG2128 # Protein_GI_number: 16129707 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 12 186 5 180 182 209 51.0 3e-54 MKNSGQQPWVSPLKKIPSVLVPIVRAQEKHYGQILNPTRWWGRFPFLFWLIAFFVGFLER KKSAISPTLRALVMTRVSQQCECDFCIDANSLRLAQRSGSLDKVMSVYHWQEADCFDDQE RAALAYADGMTATPPSIDEALKSELKRYFSEKAITELTALVAFQNLSARFNSALDIPSQG LCVPERDVQSRGKPRV >gi|316919296|gb|ADCU01000010.1| GENE 86 98994 - 100214 1142 406 aa, chain + ## HITS:1 COG:STM2331 KEGG:ns NR:ns ## COG: STM2331 COG0436 # Protein_GI_number: 16765658 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Salmonella typhimurium LT2 # 1 404 1 404 404 775 90.0 0 MSPIEKSRKLDHVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFEAPDEILVDVIR NLPTAQGYCDSKGLYSARKAIMQHYQARDIHDVTVEDIYIGNGVSELIVQSMQALLNTDD EMLVPAPDYPLWTAAVALSGGNAVHYRCDEEADWFPDLNDIRSKITPRTRGIVIINPNNP TGAVYSKELLEEIVTIARENNLIIFADEIYDKILYDDAEHISIASLAPDLLVVTFNGLSK TYRVAGFRQGWMVLSGPKKHAKGYIEGLEMLASMRLCANVPMQHAIQTAIGGYQSINEFI QPGGRLYEQRNRAWELINEIPGVSCVKPRGALYMFPKIDAKRFNVHDDQKMVLDLLLQEK VLLVQGTAFNWPEPDHFRIVTLPRVDDLDMAIHKLGRFFSGYHQKY >gi|316919296|gb|ADCU01000010.1| GENE 87 100331 - 100936 674 201 aa, chain + ## HITS:1 COG:YPO2559 KEGG:ns NR:ns ## COG: YPO2559 COG1896 # Protein_GI_number: 16122777 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Yersinia pestis # 6 200 2 196 197 328 87.0 4e-90 MSQNQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAFVAHALAIIKNRKFNGNVNP ERVALLAMYHDASEVLTGDMPTPIKYYNPQIAHEYKKIEKVAQQKLIEMLPPELQNDFRP LLDEHYYTEDEKLVVKQADALCAYLKCLEELSAGNNEFKLAKARLEKTLDMRSSPEMEYF MKVFIPSFSLSLDEISQDEVM >gi|316919296|gb|ADCU01000010.1| GENE 88 101162 - 103063 1394 633 aa, chain - ## HITS:1 COG:YPO2561 KEGG:ns NR:ns ## COG: YPO2561 COG0471 # Protein_GI_number: 16122779 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Yersinia pestis # 24 633 1 610 610 928 80.0 0 MLAENPANLDIGFYRSKFTKGDVVNGELLWVLTLLLIAIVLFATNKLRMDVVALLIIIAF VLSGTLSLSEATAGFSDPNVILIAALFVIGDGLVRTGVAYQVGDWLVKVAGDSEAKMLVL LMITVASLGAVMSSTGVVAIFIPVVLSVAARMKISPARLLMPLSFAGLISGMMTLVATPP NMIVSSELVREGFRGLSFFSVTPVGIIVLLMGVGYMLVARNWLASSKEDSNKDGWTRRTF RDLIRDYKLTGRARRLALRSGSPLIGHTLDELHLRARYGANVVGIERWRKFRRVMVNAVG NTELKERDVLLIDMSDSEVDLREFCAEQMLEPMVLRGEYFSEQARDVGMAEVTIVPDSDL IGKTLREMTFRTRYGLNVVGIRRDGAPIEGKLVNEPLHLGDILLVIGNWKQIRQLQLQPR DFIVLHLPSEVDDVAPAISQAPHALFCLALMIAMMLTDEVPNAIAALIACMLMGKFRCID MESAYKSIHWPSLILIVGMLPFALALQKSGGITLAVDVLMNLVGGMGPRVVLLSLFVFCA VTGLFISNTATAVLMAPIAIATAHAMQLSPYPFAMIIAISASAAFMTPVSSPVNTLVMGP GNYSFGDFVKIGVPFTLLVMIASVIVVPWLFPF >gi|316919296|gb|ADCU01000010.1| GENE 89 103152 - 103805 545 217 aa, chain - ## HITS:1 COG:YPO2562 KEGG:ns NR:ns ## COG: YPO2562 COG0637 # Protein_GI_number: 16122780 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Yersinia pestis # 1 217 3 219 220 316 75.0 3e-86 MKCKGFLFDLDGTLVDSLPVVERSWINWAKRQGVNPQEVLDFIHGKQAITSLRHFMSGES EERIQQEYDWLEEIESRDTEGVTALPGAVALLERLNELDIPWAIVTSGSIPVAYARRAAG QLPKPDVFITAEQVSRGKPEPDAYLLGAQKLGLAVSDCVVVEDAAAGILSGLSAGCQVIA VNAPQDAPKLELVDLNLTSLVQMRVDKEGEYAVIHAL >gi|316919296|gb|ADCU01000010.1| GENE 90 103821 - 104315 543 164 aa, chain - ## HITS:1 COG:YPO2563 KEGG:ns NR:ns ## COG: YPO2563 COG3013 # Protein_GI_number: 16122781 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 164 1 164 164 290 88.0 8e-79 MEMTNAQRLILSNQYKMMTMMDPDNAERYRRLQTIIERGFGLQMRELDRDFGELSEDTCR TIINIMEMHHALQVSYNNLKEKQDIDPRRLEFLGFDAATEARYLSYVRFMVGTEGRYTHF DSGTHGFNAQTKMWEKYQRMLSIWQSCPRQYHLSAVEIAQIINA >gi|316919296|gb|ADCU01000010.1| GENE 91 104572 - 104964 381 130 aa, chain - ## HITS:1 COG:YPO2564 KEGG:ns NR:ns ## COG: YPO2564 COG3092 # Protein_GI_number: 16122782 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 130 22 151 151 211 82.0 2e-55 MKTWPSDKRLAPVFPENRIAKVTRFAVRFMPPIAIFTLTWQIALGGQLGPAIATALFACS LPMQGLWWLGKRSVTPLPPTLLQWFHELRAKLVEAGKAQAPVEGTPTYQALADVLQRAFK QLDKTFLDDI >gi|316919296|gb|ADCU01000010.1| GENE 92 105433 - 106632 1320 399 aa, chain + ## HITS:1 COG:YPO2566 KEGG:ns NR:ns ## COG: YPO2566 COG0282 # Protein_GI_number: 16122784 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Yersinia pestis # 2 399 3 400 400 737 90.0 0 MSKLVLVLNCGSSSLKFAIINAANGEEHLSGLAECFSLPEARIKWKMDGAKHEEALGAGA AHSEALNFIVNTILAQKPELSASLTAIGHRIVHGGEKFTESALITDDVLQGIKDAIPFAP LHNPAHLIGIAEAFKSFPSLKDKNVAVFDTAFHTTMPEESYLYALPYSLYKDHGVRRYGA HGTSHFFVSQEAAKMLNKPIDELNVITCHLGNGGSVTAVRNGKCVDTSMGLTPLEGLVMG TRSGDIDPAIIFHLHDSLGMSVEQINKLLTKESGLLGLTEVTSDCRYVEDNYETKADAKR AMDVFCHRLAKYIGAYTALMDGRLDAVVFTGGIGENAAMVRELTLDKLGLLGFEIDHERN LAARFGKSGTITKDGSRLAVVIPTNEELVIAQDASRLTA >gi|316919296|gb|ADCU01000010.1| GENE 93 106788 - 108944 2014 718 aa, chain + ## HITS:1 COG:YPO2567_1 KEGG:ns NR:ns ## COG: YPO2567_1 COG0857 # Protein_GI_number: 16122785 # Func_class: R General function prediction only # Function: BioD-like N-terminal domain of phosphotransacetylase # Organism: Yersinia pestis # 1 390 1 390 390 692 90.0 0 MSRTIMLIPTSTSVGLTSVSLGVIRSMEQKGVRLSVFKPIAQPRTGGDSLDQTTTIIRAN SSIPAAEPLRMSHVETLLSSNQQDVLMEEIVARYHENTKDAEVVLVEGLVPTRKHQFANA LNYEIAKTLNAEIVFVMALGNDTASQVKERIELARSSFGGSKNKNITGVIINKLNAPVDD QGRTRPDLSEIFDDSNKASVANLDTAQLVANSPLPVLGCVPWSFELIATRAIDMANHLKA RIVNEGDIKTRRIKSVTFCARSIPHMLEHFRPGSLLVTSADRPDVLVAACLAAMNGVEIG AILLTGGYDMDERIAKLCERAFQTGLPVFMVDTNTWQTSLSLQSFNLEVPADDHQRVEKL QNYVASHIDSKWIDSLTAASERSRRLSPPAFRYELTELARKACKRVVLPEGDEPRTVKAA AICAERGIAECVLLGNPEEIQRVAAAQGVVLGKGIEIVDPNVVREQYVPRLVELRKNKGM TEVVAREQLEDNVVLGTLMLEQNQVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVF FMLLPDQVLVYGDCAINPDPTAEQLSEIAIQSADSAAAFGIEPRVAMISYSTGNSGAGSD VEKVREATRLAQEKRPDLIIDGPLQYDAAIMADVAKSKAPNSPVAGKATVFIFPDLNTGN TTYKAVQRSADLVSIGPMLQGMRKPVNDLSRGALVDDIVYTVALTAIQAAQAAAAAAK >gi|316919296|gb|ADCU01000010.1| GENE 94 109026 - 109991 901 321 aa, chain - ## HITS:1 COG:STM2340 KEGG:ns NR:ns ## COG: STM2340 COG3958 # Protein_GI_number: 16765667 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Salmonella typhimurium LT2 # 10 317 10 317 317 488 78.0 1e-138 MSHEFLPLQKDKIEMRKVYAQAMREQFMENTPVIALEADLMSSMAMDAVHRDFPQQVINC GIMEANVIGTAAGLSLAGRIPFVHTFTAFASRRCFDQLFMSVDYQKNNVKVIASDAGVSA CHNGGTHMSFEDMGIVRGLAHSVVMEMTDAAMFRDILRQLVDLKGFHWVRTIRKQAYTIY PEGTEFTIGKGKVLQDGKDITLIANGIMVAEALQAAEILKQQGYSVAVIDMFTLKPIDKD LIIEYATKTGRIVTCENHSIHNGLGSAVAEVLVENYPVLMRRVGIKERYGQVGTQDFLMK EYELTAEDIVKQAETLLNDNM >gi|316919296|gb|ADCU01000010.1| GENE 95 109988 - 110818 716 276 aa, chain - ## HITS:1 COG:STM2341 KEGG:ns NR:ns ## COG: STM2341 COG3959 # Protein_GI_number: 16765668 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Salmonella typhimurium LT2 # 2 273 1 272 276 432 74.0 1e-121 MLNLNEVQRYATEIRVETLKALTNLGFGHYGGSMSVVETLAVLYGAVMNIDPSDPEWEAR DNFVLSKGHAGPALYSALALKGYFPREDLATLNQNGTHFPSHPDRLLTRGVDATTGSLGQ GVSIATGMALAHRLAGRKNRVFCILGDGELNEGQCWEAFQFIAHHNLNNLTLFIDYNKQQ LDGTLDEVIKPFDLKAKFSAFGFDVVSVKGDDIAAIYDVVAPVRTSEQRPRVVILDSIKG QGVPYIEQLSNSHHLRLTAEIKAEMLKSIETLEASL >gi|316919296|gb|ADCU01000010.1| GENE 96 110828 - 112213 1419 461 aa, chain - ## HITS:1 COG:STM2342 KEGG:ns NR:ns ## COG: STM2342 COG3037 # Protein_GI_number: 16765669 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 453 1 453 463 644 87.0 0 MFIQETLKFIVDILKVPAVLVGLIALIGLLAQKKSFSDVVKGTVKTILGFIVLGGGAGVL VGSLNPLGGMFEHAFNIQGIIPNNEAIVSIALEKYGAATALIMAFGMVANIVVARFTKLK YIFLTGHHTFYMACMIGIILTVAGFEGVQLVFTGALTLGLVMAFFPALAQRYMRKITGND DIAFGHFGTLGYILSGWIGGRVGKGSRSTEEMNLPKNLSFLRDSSISISLTMMVIYLIMA VSAGSTFVEATYSAGQNYLVYAIIMAITFAAGVFIILQGVRLILAEIVPAFTGFSERLVP NARPALDCPVVYPYAPNAVLVGFLFSFLGGLVGLFLLGQFNLVLILPGVVPHFFTGATAG VFGNATGGRRGAMLGAFANGLLITFLPVLLLPVLGALGFANTTFSDADFGAIGIVLGNMA RFMNKDMIMVVIIAIFAALVAHNYFFSRKSSPSTSSDGVNK >gi|316919296|gb|ADCU01000010.1| GENE 97 112252 - 112524 180 90 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984431|ref|ZP_01817719.1| PTS system, IIB component, putative [Streptococcus pneumoniae SP3-BS71] # 1 80 1 80 94 73 49 5e-12 IMKIMAICGSGLGSSFMVEMNIKKVLKKMGVDAEVEHSDLSSAIPGEADLFVMAKDIAAS ASIPDNQLIVITNIIDINELETKLRAYFNK >gi|316919296|gb|ADCU01000010.1| GENE 98 112611 - 113054 273 147 aa, chain - ## HITS:1 COG:STM2344 KEGG:ns NR:ns ## COG: STM2344 COG1762 # Protein_GI_number: 16765671 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Salmonella typhimurium LT2 # 1 147 1 147 147 169 59.0 2e-42 MLNTWLTDDTIQIRERVDSWQEAVKLSAQPLLQKGIITPDYLAAIYQQHEKLGPYYVLAP GIAMPHARPEEGAKSLGLSLLSVKQDVLFYSADNDPVNLIVMLSAPDSHSHIELISHLAE FFSDDDAVKKIHQATTIEEIKTIIEKY >gi|316919296|gb|ADCU01000010.1| GENE 99 113364 - 114383 513 339 aa, chain + ## HITS:1 COG:STM2345 KEGG:ns NR:ns ## COG: STM2345 COG1609 # Protein_GI_number: 16765672 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 339 1 339 339 456 67.0 1e-128 MPIIKKRRSTGRVTLADVARLAGVGSMTVSRALRTPDQVSDKLREKIESAVSELGYVPNL AASALASGAGRTISVVVPSFTEAGCAQMLAGLQSVLQPAGFQLTLSESQRDEERETNMLE NLLSASLAAVVLLSTEQSDNTRQWLKNAEIPVVEIGAIREDPIDINIGIDYADAMFNLTR HVIERGYENIGLLCANQEPWVFQQHLHGWHQALLRSHFSPHRVINAAEPANFSTGANLLP EFILAWPEIDALICASDELACGVLYECQRRHIRVPSQLAVAGFGNRDVSQVCQPPLTTTA VPFKEIGIQAANALLARLNQQATQATIPVSSVLCKRSSC >gi|316919296|gb|ADCU01000010.1| GENE 100 114404 - 115018 534 204 aa, chain - ## HITS:1 COG:YPO2781 KEGG:ns NR:ns ## COG: YPO2781 COG0494 # Protein_GI_number: 16122985 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Yersinia pestis # 1 174 1 174 182 264 78.0 9e-71 MVEQTLNTGLEWVDIVDENNDVIAQSTRAQMRAQCLRHRATYIVVHNGMGQILVQKRTDN KDFYPGWLDATAGGVVQSGENMLDSARREAEEELGIAGVPFADHGMFYFEQDNCRVWGAL FSCVSHGPFALQEEEVESVRWMTPEEITAECDSFTPDSLKALSLWMTRNSDKHYQPMCIQ KSTPSAKVSSETEAEDVPQNESEE >gi|316919296|gb|ADCU01000010.1| GENE 101 115131 - 115679 376 182 aa, chain - ## HITS:1 COG:ECs3184 KEGG:ns NR:ns ## COG: ECs3184 COG0622 # Protein_GI_number: 15832438 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Escherichia coli O157:H7 # 1 182 2 183 184 275 74.0 5e-74 MKLMFASDIHGSLSATQRVLELFEQNESQWLIILGDVLNHGPRNPLPEGYNPPQVAELLN KFADKIIAVRGNCDSEVDQMLLKFPMMAPWQQILLNNQRLFLTHGHLYHPAELPPLSQKD VLVYGHTHLPVAEQRGDIYCFNPGSVSLPKGGNVPSFGMLEHGVLKVCALNGTEILAEVA ID >gi|316919296|gb|ADCU01000010.1| GENE 102 115817 - 116461 330 214 aa, chain - ## HITS:1 COG:yfcF KEGG:ns NR:ns ## COG: yfcF COG0625 # Protein_GI_number: 16130236 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli K12 # 1 212 1 212 214 247 60.0 9e-66 MSHPDITLYSDSHFFSPYVMSVYVALKEKGLRFELEPVDLAEHENQQEAYAELSLTRRVP TLLHENFSLSESSAITEYLDEVFTAPDFASLYPHDKQKRAKAREIQAWLRSDLMPIRQER STEVVFAGLKPPALSEEGVYAAAKLIAGVERLLLEGHQNLFGEWCIADTDLALMLNRLIM AGDAVPERLVEYAHFQWQRASVCQWLALSAAKRR >gi|316919296|gb|ADCU01000010.1| GENE 103 116673 - 117299 522 208 aa, chain + ## HITS:1 COG:STM2349 KEGG:ns NR:ns ## COG: STM2349 COG0625 # Protein_GI_number: 16765676 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 202 1 202 215 316 73.0 2e-86 MIDLYYAPTPNGHKITLFLEESGLSYRIHHVDIGAGEQFKPEFLAISPNNKIPAIVDRQP VDGGAPLSLFESGEILLYLAEKTGRFISQELRSRASTLQWLFWQVGGFGPMLGQNHHFNH YAPQPVPYAIERYQVETKRLYTVLDKQLQKHAYVSGDEYSIADMAIYPWVVPHARQRIDL EDFPAVRNWFERISARPATKKAYNLPQE >gi|316919296|gb|ADCU01000010.1| GENE 104 117407 - 117784 368 125 aa, chain + ## HITS:1 COG:ECs3187 KEGG:ns NR:ns ## COG: ECs3187 COG1539 # Protein_GI_number: 15832441 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Escherichia coli O157:H7 # 5 122 3 120 120 176 80.0 1e-44 MSFLQPDAIIRIKNLRLRTFIGIKEEEINNKQDVVINVVIHYPAEQARRSENIADALNYR TITKRIIAHVEEHRFALLEKLTQDVLDIACEHHWVTYAEVEVDKLYALRYADSVSMTMRY RKADK >gi|316919296|gb|ADCU01000010.1| GENE 105 117883 - 118788 708 301 aa, chain + ## HITS:1 COG:YPO2778 KEGG:ns NR:ns ## COG: YPO2778 COG1090 # Protein_GI_number: 16122982 # Func_class: R General function prediction only # Function: Predicted nucleoside-diphosphate sugar epimerase # Organism: Yersinia pestis # 1 299 1 299 302 418 65.0 1e-117 MRIFITGGTGLIGKPLCQRLQTLHHELTVLTRDPQKGRERLGDNVSYVTSLDALSNLDGY DAVINLAGEPIADKRWSEEQKQRLCHSRWDITQRIVELIHNSAKPPSVLLSGSAVGYYGD QDEALVTEEDPPHHEFTHDLCARWEGLALQAASDKTRVCLMRTGIVLSPNGGALSKMLPL FRLGLGGEMGSGRQYMPWIHIDDMVNAILYLLECPTLNGPFNMTAPYPVHNEQFIATLGE ILGRPTVVRTPAFAIKTLMGEASVLVLTGQRAVPKRLEEAGFGFRYFELEDALRNVLGKE F >gi|316919296|gb|ADCU01000010.1| GENE 106 119563 - 120336 257 257 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 20 232 20 221 223 103 34 5e-21 MNPTKLNVIELHKRYGDHEVLKGVSLTAKAGDVISIIGSSGSGKSTFLRCINFLEKPSEG TIAINGTDIGLVRDTDGQLKVGDKKQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQV LGLNKAEAHERAIRYLDKVGIDERARGKYPINLSGGQQQRVSIARALAMEPEVLLFDEPT SALDPELVGEVLRIMQKLAEEGKTMVVVTHEMGFARHVSNHVIFLHQGIIEEQGPPELVF GNPKSVRLQQFLSGALK >gi|316919296|gb|ADCU01000010.1| GENE 107 120347 - 121063 427 238 aa, chain - ## HITS:1 COG:ECs3191 KEGG:ns NR:ns ## COG: ECs3191 COG4160 # Protein_GI_number: 15832445 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 383 83.0 1e-106 MNEIIHEYWKSLIWTDGFRFTGIAITLWLLIASVVMGGILAVFFSVARVSPKRWISMPVW LFTWVFRGTPLYVQLLVFYSGMYTLEIVKGTEMLNAFFRSGLNCTLLALTLNTCAYTTEI FAGAIRAVPHGEIEAANAYGFSRFKLYRCIILPSALRTALPAYSNEVILMLHSTALAFTA TVPDLLKVARDINSATYQPFTAFGIAAVLYLIISYVLIRLFRKAEKRWMAHVNPSLSH >gi|316919296|gb|ADCU01000010.1| GENE 108 121060 - 121746 612 228 aa, chain - ## HITS:1 COG:STM2353 KEGG:ns NR:ns ## COG: STM2353 COG4215 # Protein_GI_number: 16765680 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 228 1 228 228 317 77.0 1e-86 MLQGYSQLILNGALVTLELAVSSVLLAVAIGLLGAAAKLSRSSVLTTIFEGYTTLIRGVP DLVLMLLIFYGLQMVLNQITDLLGWSQFNIDPLVAGVITLGFIYGAYFTETFRGAFMAVP KGQIEAATSLGFSASKIFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLDDLVKAT QIAGKGTWQPFYFAIVAGAIYLLFTTVSNGVLLMLEKRYSAGVRRAEL >gi|316919296|gb|ADCU01000010.1| GENE 109 121828 - 122610 750 260 aa, chain - ## HITS:1 COG:YPO2774 KEGG:ns NR:ns ## COG: YPO2774 COG0834 # Protein_GI_number: 16122978 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Yersinia pestis # 1 259 3 261 262 381 76.0 1e-106 MKKQVLAVSLVLAMVGSSSVFAAVPDHLRVGTDPTYAPFSSKNPQGQLVGFDIDLAKELC KRINTQCTFVESDFDALIPSLKAKKIDTIISSLSITEKRQKEIAFTEKLYAADSRLVAAK GSPIQPTLESLKGKHVGVLQGSTQETYANQHWRPQGVDVVPYQNQDLIYADLAAGRIDAA FQDEVAASEGFLKQPVGKDYAFAGPSVKDNAIFGVGTGMGLRKDDADLKVALDKAFDSMR KDGTYDKFAKKYFDFNVYGG >gi|316919296|gb|ADCU01000010.1| GENE 110 122977 - 123558 620 193 aa, chain - ## HITS:1 COG:YPO2773 KEGG:ns NR:ns ## COG: YPO2773 COG0163 # Protein_GI_number: 16122977 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Yersinia pestis # 1 188 1 188 190 307 80.0 8e-84 MKRLIIGISGASGVIYGVRMLEVLRGVPDIETHLIMSNAARQTLALETDLQLRDVQSLAD VVHDARDIAASISSGSFKTAGMVILPCSMKTLSGIVHSYTDNLLTRAADVVLKERRRLVL CVRETPLHLGHLRMMTTAAELGAIVMPPVPAFYHRPQTLQDIVDQTVNRVIDQFDIEISQ DLFTRWDGGHKSQ >gi|316919296|gb|ADCU01000010.1| GENE 111 123555 - 123935 336 126 aa, chain - ## HITS:1 COG:all4855 KEGG:ns NR:ns ## COG: all4855 COG5499 # Protein_GI_number: 17232347 # Func_class: K Transcription # Function: Predicted transcription regulator containing HTH domain # Organism: Nostoc sp. PCC 7120 # 4 126 5 125 126 118 51.0 3e-27 MNIRPIRNEQDYKAALKEAARLFENPPEPNTPEGDQFEVMLTLIESYESKHFPVELPDPV EAIKFRMEQSGLTVRDLTAAIGHPNRVYEVLNRKRNLTLPMIRRLHSLFGIPAECLIKST KVGQHS >gi|316919296|gb|ADCU01000010.1| GENE 112 124192 - 125709 1503 505 aa, chain - ## HITS:1 COG:YPO2772 KEGG:ns NR:ns ## COG: YPO2772 COG0034 # Protein_GI_number: 16122976 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Yersinia pestis # 1 505 1 505 505 941 89.0 0 MCGIVGIAGFTPVNQSIYDALTVLQHRGQDAAGIVTIDANNGFRLRKANGLVKDVFEARH MLRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPFGITLAHNGNLTNAHELKQKLFERAR RHVNTTSDSEILLNIFAHELDRFDHYPLEVDNVFAAVAATHQQIRGAYACVLMIIGHGMV AFRDPNGIRPLVIGKRDLEDGRVEYMVASESVALDTLGFEFIRDVAPGEAIYVTEKGQLF TRQCADNPKSNPCLFEYVYFARPDSFIDKISVYSARVRMGQKLGAKIAREWEDLDIDVVI PIPETSCDIALEIARILDKPYRQGFVKNRYVGRTFIMPGQQERRKSVRRKLNANRAEFRD KNVLLVDDSIVRGTTSQQIMEMAREAGAKKVYLASAAPEIRFPNVYGIDMPNANELIAHG REVNEIAKIIGADGLIFQDLNDLIEAVREENPDIEQFECSVFNGIYVTKDVDQGYLDYLQ SLRSDDAKAIRGQEEAENLEMHNEG >gi|316919296|gb|ADCU01000010.1| GENE 113 125731 - 126246 501 171 aa, chain - ## HITS:1 COG:YPO2771 KEGG:ns NR:ns ## COG: YPO2771 COG1286 # Protein_GI_number: 16122975 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Yersinia pestis # 1 164 1 164 169 261 90.0 6e-70 MVWIDWVIIGIIGFSALVSLIRGFVREALSLVTWGAAFFVASHFYTYLAVYFTRFEDALV RNGIAIAILFVATLIVGAIVNYVIGSLVERTGLSGTDRVLGICFGALRGVLIVSALLFFL DTFTSMAQSADWKQSQLIPQFSYIIRWFFDYLQSTSSFIPEHLPSIPLPLR >gi|316919296|gb|ADCU01000010.1| GENE 114 126502 - 127299 705 265 aa, chain - ## HITS:1 COG:YPO2770 KEGG:ns NR:ns ## COG: YPO2770 COG3147 # Protein_GI_number: 16122974 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 263 1 237 240 191 58.0 9e-49 MASKFQNRLVGTIIIVALGVIVLPGLLDGQKKHYQDEFGAIPLVPKPGEDDPTDVIPPVT QPLSETPLLPQEGANAQIPQESGNVPNQDRDSVNMTSPSNVQQGRGEVVDLKPVESKPVE QPKPVKKPVEKPKPVEPPKMVEAKPKPVEKTVEQPKTVEQSKPVEQPKPAEQPKAAAVPE EKAPAGQAYVVQLGALRNASKASEIVAKLRLSGYRAYTVPATPVQGEITRLFVGPDASKQ KLESALPELNSISGLNGQVRSYSGK >gi|316919296|gb|ADCU01000010.1| GENE 115 127289 - 128575 1200 428 aa, chain - ## HITS:1 COG:YPO2769 KEGG:ns NR:ns ## COG: YPO2769 COG0285 # Protein_GI_number: 16122973 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Yersinia pestis # 1 420 1 432 434 601 70.0 1e-172 MNNLPIPQATSPLADWLHYLEHLHTKAIELGLDRVKRVAENLDLLKPAPTVFTVAGTNGK GTTCRTLEAILMAAGYRVGVYSSPHLLRYTERVRIQGEELSEAEHCRSFAALEAGRGDIS LTYFEYGTLSALQLFKQSALDVVILEVGLGGRLDATNIVDPSVAVVTSIALDHTDWLGPD RESIGREKAGIFRAGIPAIVGEPDMPLTIAEVAAEKGAKLYRRGADWNFSVTDRDWQWHD ADKTWSHLPLPEVPLPNAATALAALRHCSLSIDDAAIRQGLDSALLPGRFQIVREQPLLI LDVAHNPHAAGYLAGRLQQLLEQRPSTQPRHLRAVVGMLEDKDIAGTLECLKPLIHDWYC APLEGPRGAPVERLAEHLDEPNVFADVESAWRKAMQDAAPQDIVIVCGSFHTVAHVMAAL ETENASGE >gi|316919296|gb|ADCU01000010.1| GENE 116 128740 - 129648 999 302 aa, chain - ## HITS:1 COG:YPO2768 KEGG:ns NR:ns ## COG: YPO2768 COG0777 # Protein_GI_number: 16122972 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Yersinia pestis # 1 285 1 285 304 513 91.0 1e-145 MSWIERILNKSNITQTRKASIPEGVWTKCDSCGQVLYRAELERNLDVCPKCDHHMRMSAR MRLHTLLDEGSEVELGSELEPKDILKFKDSKKYKDRISAAQKETGEKDALIVMKGTLKGM PVVAASFEFSFMGGSMASVVGARFVRAVEQALEDNCALICFSASGGARMQEALMSLMQMA KTSAALAKLQERGLPYISVLTDPTMGGVSASLAMLGDINVAEPKALIGFAGPRVIEQTVR EKLPPGFQRSEFLIEKGAIDMIVRRPEMRDKLASLVAKMTGQPEPVSNEIVREVPVDGET QE >gi|316919296|gb|ADCU01000010.1| GENE 117 129957 - 130631 617 224 aa, chain - ## HITS:1 COG:STM2367 KEGG:ns NR:ns ## COG: STM2367 COG0586 # Protein_GI_number: 16765694 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 218 1 218 219 358 87.0 5e-99 MEYIQWIIDFILHIDVHLAELVAQYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA LAALPTNDLNVHTMVALMIAAAIIGDAVNYTIGRLFGAKLFSNPNSKIFRRSYLDKTHAF YDKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAMYNVIGALLWVLLFTYAGYLFGN VPVVQENLKLLIVAIIVLSILPGVIEVWRHKRAAKKSASSDSHL >gi|316919296|gb|ADCU01000010.1| GENE 118 130696 - 131517 581 273 aa, chain - ## HITS:1 COG:truA KEGG:ns NR:ns ## COG: truA COG0101 # Protein_GI_number: 16130253 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Escherichia coli K12 # 11 273 8 270 270 436 80.0 1e-122 MTESEVLSANPVYKIALGIEYDGSQYAGWQRQSDAPSVQECLEKALSKVACEPITVSCAG RTDAGVHATGQVVHFETHVARKDAAWTMGVNTHMPKDIAVRWVKSVSEDFHARFSATARR YRYVIYNHRYRQAVLQNGLTHFYHHLDAERMERAGQALLGENDFTSFRASQCQSRTPWRN VSHLKVTRLGDYVIVDIKANAFVHHMVRNIVGSLMEIGCGNQPESWMAELLAAKDRKLAA ATAKAAGLYLVSVDYPEHFDLPKVSMGPLFLAD >gi|316919296|gb|ADCU01000010.1| GENE 119 131553 - 132563 1100 336 aa, chain - ## HITS:1 COG:YPO2765 KEGG:ns NR:ns ## COG: YPO2765 COG0136 # Protein_GI_number: 16122969 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Yersinia pestis # 1 336 1 336 336 516 77.0 1e-146 MTDGWNIALLGATGAVGSALLEQLAEREFPVGELFPLASERSAGESIRFNGKQILVENAA EFDWSQVQLAFFVAGTEASLRYAEEAGNAGCLVIDSSDAFAMEHDVPLVVPSVNPQALSE YRNRNLVVVADSLVSQLLTAIRPLTDEAGLARIHVTSLLSASAHGKAAVDELAGQSARLL NGIPFEPGLFQKQLAFNLLPLVSDAQGSVREERRVVDQVRKVLQDESLPMSVSVIQSPVF YGHAQTVHIETQRPISAEEARDVFGRLESIELSEENDYPTQVGDASGNPLLSIGCVRNDY GSPDVVQFWSVADNVRFGGALMAIETAERLIQEYMY >gi|316919296|gb|ADCU01000010.1| GENE 120 132736 - 133863 1050 375 aa, chain - ## HITS:1 COG:YPO2763 KEGG:ns NR:ns ## COG: YPO2763 COG0111 # Protein_GI_number: 16122967 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Yersinia pestis # 1 374 1 374 375 585 77.0 1e-167 MKILVDENMPYAGELFSRLGAVQAVRGRPLPAEALVGADALMVRSVTKVNADLLSGTSVR FVGTATAGTDHVDDRWLSEQGIGFSAAPGCNAIAVVEYVFSSLMMLAERDGFDLREKTVG IVGVGNVGSRLNNRLKALGVQTLLCDPPRAARGDVETFYPLDKLVQDADILTFHTPLNKT GSDKTLHLVDADLLAVLPDNRILINAARGPIVDNSALLAALKNGKKLSVILDVWEPEPEL SLELLDLVDIGTPHIAGYSLEGKARGTTQVFEAYSEFLGQPQHVALSELLPVPEIASVRV HGALDQAKLKRLMHLVYDVRRDDAPLRRVAGQAGEFDRLRKHYQERREWSSLCVLCDDSA SVELLRALGFSAELA >gi|316919296|gb|ADCU01000010.1| GENE 121 133972 - 134748 320 258 aa, chain - ## HITS:1 COG:YPO2762 KEGG:ns NR:ns ## COG: YPO2762 COG2207 # Protein_GI_number: 16122966 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 7 256 6 255 261 351 66.0 7e-97 MAEQRIFPSDEVSSVRNLFFRCEEVNADTEYLPHHHPWGQLIYIRTGVLALNVGDQRFLA PSKFAVWLPAGVEHSSYNRKLSQFRTINISARLCADLPAEACLLNVSPLFNAIVDNCFER DLIFPETREDLRLCRVLVDQLKQAPVHQTYLPSSQDKFLAPVLRMLECCPSDNTPLSVWA QRVYTTERTLSRRCQIELGMSFSEWRQRLRFLHSLPLLEQGKTVQEVALEVGYSSSSAFI VMFQQISGTTPERYRKVS >gi|316919296|gb|ADCU01000010.1| GENE 122 134901 - 135830 235 309 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily [Haemophilus influenzae R2866] # 4 279 2 277 290 95 27 2e-18 MNALFPLFAVLIWSMNAIVSKVSAGAIDPAAISFYRWVLALLVLTPFVLPGVVRNRKAIR PHLGKLLILGLLGMVLYQSLAYYAAHSVSALFMGILSSLIPLLTVLISIWLLRIVPTVGI ALGSVMSFFGLVWLVSGGNPQELLTHGIGSGELMMFAASASYALYGVLTKRWNINLPNWQ SLYIQIVFGVLLLLPNFLLTDNVSLNAQNIPLVLFAGIPASIIAPFLWIQGVVRLGANKA SIFMNLTPVFTAIIAVSFLHEQLHSYHIIGGGIALLGVVIAQRLRTPLARKKKPESVEST EKKTCPTSE >gi|316919296|gb|ADCU01000010.1| GENE 123 135982 - 136155 180 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKITLVSIKSNAKDIIANCRMLFMLLRHQADAAIPSNHEEMFKEPENAMVKAARRVC >gi|316919296|gb|ADCU01000010.1| GENE 124 136386 - 136910 326 174 aa, chain - ## HITS:1 COG:STM1116 KEGG:ns NR:ns ## COG: STM1116 COG0526 # Protein_GI_number: 16764474 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Salmonella typhimurium LT2 # 3 164 4 165 168 159 48.0 2e-39 MIKWRKWVRELAIFVVVLAAFSWGMDQWRKPTPPEIMHLPDVTLISGQTVSLAELSADKP LLIYFWATWCGVCKLTSPMVEGLHSDGMNVLSVAIRSGDNERLMRGMTAKGITFPVVNDE LGRLSAEWNISATPTFVILEQGKMVSSTSGWSSAWGVKFRMWWADARIFSNLAD >gi|316919296|gb|ADCU01000010.1| GENE 125 136907 - 137650 815 247 aa, chain - ## HITS:1 COG:STM1115 KEGG:ns NR:ns ## COG: STM1115 COG1651 # Protein_GI_number: 16764473 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Salmonella typhimurium LT2 # 80 243 39 202 207 206 59.0 4e-53 MKKTMTMLMNTALLAMTMLSFSGTAAPLTTEQQNQVRELIRDTLVNNPQILEEAVAAWQQ QSAEQAGAQLGKVIEQNKDALFNDAASPRIGAKNAKLTLVSFTDYNCPYCKQFDPQLEKI VKKYPDVAVVIKLLPFKGETSQSSAQYALTLWQQNPARFEALHQRLMSKKGYHTEDSIAS ALKSTGNATLKVDDKTLDEVRSSLRLADILGVQGTPATLVGNQMIPGAISYEDLEQLIKA ELARKSS >gi|316919296|gb|ADCU01000010.1| GENE 126 137655 - 139682 1141 675 aa, chain - ## HITS:1 COG:STM1114_2 KEGG:ns NR:ns ## COG: STM1114_2 COG4232 # Protein_GI_number: 16764472 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Salmonella typhimurium LT2 # 284 674 1 341 345 410 58.0 1e-114 MYLFLRALAFSLCLWLPASWAADSGWLQDPNNSHARVQISTSQPEEGTVRLLLDVRLSDG WKTYWRSPGEGGIAPEIKWQTPVEHVNWRWPTPQRFDVSGISTQGYHGDTVFPITLNVPK TATRLQGVLTLSTCSNVCVLTDFPFDLDLTQPAPQGFEHAFTRAEGTLPLTSGMVHQAQA GYIKGELRVSAEREEGWQKPDVFFDVPEGADFAKPSIKIEGKRLLATVHVTDGWEGSAPD LDGKPLSMVFSDSGIAQQMTMAVSNVLPASGSSPLGLSTAILLALLGGLILNLMPCVLPV LAMKLGSVLQLENRERSVVRRQFLASASGILVSFWALAGLMTGLRLSQQAVGWGIQFQSP WFIGLMVVVTALFSANLFGFFSIRLGSNTTTRLATAGGHGSGGHFWQGVFATLLATPCSA PFLGTALAFALAAPLAELWVVFTALGIGMSLPWLLIAAFPFVAKALPKPGPWMNRLRIVL GLMMLASSLWLISLLAAHTGVVVVLIISGLLLLALLILTGIQYGRRLLLIWGAVLLLLAG VVLATGALTAERWRTPMTDSVQWRPLSEQAITQALRENKRVFVDVTADWCVTCKANKYNV LLRDDVQQVLKEPDVVALRGDWTTPSPAITQFLQQRGAVAVPFNQIYGPGLPSGEVLSPL LDRQTLLNTLNNAKE >gi|316919296|gb|ADCU01000010.1| GENE 127 139735 - 140037 156 100 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAGMHMLSKYLPTDDITATQTAVEPLGVGNQELPISPCELSAKSLLVANSMAVEHLFFAL LLFVALLLEPARRLYSLIPPPRAVSLPRLRVHLRLCVFRE >gi|316919296|gb|ADCU01000010.1| GENE 128 140372 - 140737 230 121 aa, chain + ## HITS:1 COG:no KEGG:CKO_01542 NR:ns ## KEGG: CKO_01542 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 8 113 7 112 119 151 66.0 6e-36 MYQSAENIWTRLQRSPFRMKFHLNAKDNAYLQQKGTAVILSHAYDFIDARLAPAYPDNDG KQTPMRGHPVFVAQHATATCCRGCLEKWHKIPQGKTLNEEEKQYVVSFIAHWIEHETSGH P >gi|316919296|gb|ADCU01000010.1| GENE 129 140882 - 141313 242 143 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKVLALVVAATMGLSSVAFAAETTAAPAAPAASSTTAAAPAAKATSTTHHKKAKHHKKA ATTEQKAQAAKKHAKKAPVAQKAQAAKKAQHHKKAAPVAQKAQAAKKAQHHKKAAPVAQK AQAAKKTQHHKKAAPATAAAPKA >gi|316919296|gb|ADCU01000010.1| GENE 130 141686 - 141817 71 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVILTSILLKIFFKQLTLRDAAAIAAHLVVIVFIFEQLIAIDI >gi|316919296|gb|ADCU01000010.1| GENE 131 142058 - 142456 343 132 aa, chain - ## HITS:1 COG:no KEGG:plu3746 NR:ns ## KEGG: plu3746 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 2 128 1 127 131 179 64.0 4e-44 MLNKNSRLRIARPTNRLSQIAQMYQDGLGFEVLGSFDDHQGFDGVILGHQNHAYHLEFTH HRGTSVPDAPSQDNLLVFYIPDEREWRTACAQMERAGFIAEDSYNPYWDLNGKTFADPDG YRVVLQNSGWDR >gi|316919296|gb|ADCU01000010.1| GENE 132 142672 - 142893 322 73 aa, chain + ## HITS:1 COG:no KEGG:Kvar_2398 NR:ns ## KEGG: Kvar_2398 # Name: not_defined # Def: protein of unknown function DUF903 # Organism: K.variicola # Pathway: not_defined # 1 71 1 71 73 84 57.0 1e-15 MKKMISMLCIGAAVLMVAGCSSDYVMSTKSGEMIVTQGKPKIDKDTGMTSYVDQDGVNRQ INTNDVAQMIEKE >gi|316919296|gb|ADCU01000010.1| GENE 133 142958 - 144172 1248 404 aa, chain - ## HITS:1 COG:YPO2757 KEGG:ns NR:ns ## COG: YPO2757 COG0304 # Protein_GI_number: 16122961 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Yersinia pestis # 1 404 1 407 407 650 84.0 0 MKRAVITGLGVVSSIGNNQQEVLASLKEGRSGITFAPELKEAGMRSHVWGNIKLDTTGMI DRKVMRFMSDASIYAYLSMQEAIKDSGLADDMVSNDRTGLIVGSGGGSPRNQVAGADGMR SRGLRGVGPYMVTKAMGSGVSACLATPFKIRGVNYSISSACATSAHCIGNAVEMIQLGKQ DVVFAGGGEELCWELACEFDAMGALSTQYNETPDKASRTYDTKRDGFVISGGGGIVVVEE LEHALARGAHIYAEIVGYGATSDGYDMVAPSGEGAARCMRMAMKDLDAPVDYLNVHGTST PVGDVKELGAIREVFGDNTPAISSTKAMTGHALGAAGVHEAIYTLLMLEHGFVAPSINIE ELDEQAQGMNIVTEPTQRDLTTVMSNSFGFGGTNATLVMKKFQK >gi|316919296|gb|ADCU01000010.1| GENE 134 144346 - 146364 1205 672 aa, chain + ## HITS:1 COG:YPO2756_2 KEGG:ns NR:ns ## COG: YPO2756_2 COG0665 # Protein_GI_number: 16122960 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Yersinia pestis # 256 672 1 423 435 543 62.0 1e-154 MSHSPIQSAKLSWNEQGTPVSQQFDDVYFSNQDGLSETRYVFLQGNHLAERWQQAQQRTF AVAETGFGTGLNFLTLWQAFDAFRKQHPESPFNHLHYVSFEKYPLLSDDLAAAHARWPEL KDFSEQLCAIWPAALPGCHRLFLADGHITLDLWFGDVNELIPALPYSIYGQIDAWFLDGF APSKNPDMWTPALFDTMVKLAKKDGTFATFTAAGFVRRGLQEAGFEVQRVKGFGQKREML TGTRAEPLTASSLAPWFARPQASNPQDIALIGGGIASALTALALLKRGSKVTLYCADAKP ALGASGNRQGALYPLLNGRNNPLERFFISAFAFARRQYDDFANLGLAFDHQWCGVTQLGW DEKSSHKIAQILATDWPNWLAEKGDAAALTELTGVDIPHDGLTYSAGGWLCPSQLTQVAI DLARQQGLVVHFDTELTQLTQNSDGWQLTFHHGDIQQHSCVVLANGHRLNHFTQTEALPL SAVRGQVSHIPTTETLKQLKQVLCYDGYLTPANPANAHHCIGASYQRNNTDLRFSNADQQ ENRDRLLKCLPRVEWPHEVDISDNEARVGVRCAIRDHMPMVGAVPHYAATLEQYQDLMTQ KTVPESVVSAPIYPDLFMIGGLGSRGLCSAPLCAEILAGQIYGEALPVEQDVLDALNPNR MWVRKLLKGKAV >gi|316919296|gb|ADCU01000010.1| GENE 135 146426 - 146776 251 116 aa, chain - ## HITS:1 COG:no KEGG:YPO2729 NR:ns ## KEGG: YPO2729 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis # Pathway: not_defined # 10 114 2 110 115 81 42.0 1e-14 MDQDDVKAKALSKTTIMKNDLFIRDKLKKIDNIGVAIFFAIPLILFLLGGASLAHWVALL WPLYSLGFVIYFRKILKTISNKSLQMTRMYSFYALARFILIGFPLVGLYILCQVAR >gi|316919296|gb|ADCU01000010.1| GENE 136 146852 - 147130 413 92 aa, chain - ## HITS:1 COG:no KEGG:ECA3065 NR:ns ## KEGG: ECA3065 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 1 92 1 92 94 128 72.0 7e-29 MIADFETRILALIDDMVEHASDDELFAGGYLRGHLTLAVAELEADGEHTPAALKDAVQHS LDKAIKAGELSPPDQILVNNMWESLFAKVLAS >gi|316919296|gb|ADCU01000010.1| GENE 137 147153 - 147707 455 184 aa, chain - ## HITS:1 COG:ECs3210 KEGG:ns NR:ns ## COG: ECs3210 COG3101 # Protein_GI_number: 15832464 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 8 184 5 181 182 287 74.0 7e-78 MSQTQIEHHFQQLIDLFNQTFSDDYQTQLVAGDDEPIYLPADETSPFHRIVFAHGFYASA LHEISHWCIAGAARRQQVDYGYWYCPDGRDAKTQCEFEVVEIKPQAFDWLFCEAAGYPFN VSCDNLEGDFDPDRIAFQRKVREQVLWYLENGIPERPARFIQALQSFYNTPTLTADRFPY PEDL >gi|316919296|gb|ADCU01000010.1| GENE 138 147840 - 148652 720 270 aa, chain - ## HITS:1 COG:YPO2753 KEGG:ns NR:ns ## COG: YPO2753 COG0730 # Protein_GI_number: 16122957 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Yersinia pestis # 10 268 6 264 268 373 79.0 1e-103 MMDFINGLPVSPEMLGILFFVAMLAGFIDSIAGGGGLLTVPALLAVGVPPAQALATNKLQ SVGGSFSASLYFIRRKAVDLNDQKLVIALTFIGSMIGSILVQNMRADILRQLLPILVAGI GIYFLLTPRLGESDRQRRLSYIPFAIVAGCCVGFYDGFFGPGAGSFYALAYVTLCGFNLA KSTAHAKVLNFTSNLAALLFFMLGGKVIWSIGLVMLVGQVIGARTGAKMVLSKGQKLIRP MIVLVSLAMTCKLMYDNHGTEITQWLSHWL >gi|316919296|gb|ADCU01000010.1| GENE 139 148874 - 149611 691 245 aa, chain + ## HITS:1 COG:STM4510 KEGG:ns NR:ns ## COG: STM4510 COG1794 # Protein_GI_number: 16767754 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Salmonella typhimurium LT2 # 1 228 1 228 244 323 70.0 2e-88 MQHTIGILGGMGPAATADMLNKFVRFRHAGQDQQHIPIIACSIPDIPDRSACLLSGGPSP YDYLERYLHMLETAGAECIVIPCNTAHYWFDRLQHSAHAEMINILDATLAELPHASQTVG LLATDATLATGLYQHKLDQQGRTLCVPEGDGQSAVMQAIYAYKAGDIALSQSLLFPQVEA LMTRGADIIIMGCTEIPLIIGAEEDRFNCGFIDSTAALVRAAIRWYEAKNGETVLNAQPE LASME >gi|316919296|gb|ADCU01000010.1| GENE 140 149594 - 150490 619 298 aa, chain - ## HITS:1 COG:STM4511 KEGG:ns NR:ns ## COG: STM4511 COG0583 # Protein_GI_number: 16767755 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 4 294 8 298 302 434 72.0 1e-122 MSIVHNIETKWLYDFLTLEECRNFSQSAIKRNVSQPAFSRRIRSLEQAAGVSLFNRDVSP LQLTEPGKVFHSQVRNLLQQLESNLTELRGGSDFIEHKIKIAAAHSLSLGLLPSIVKEMP NHFAYSVEAIDVDSAVNTLREGKSDFILSYHDEYLLQAPFAHIHLFEAQLFPVCASDLQG KPLYTLDQQDFPLLNYSQSSYMGRLVNRMLAKNTHLSFRTVFVSSMSELLKQLALDGSGV AWLPDCSVAQELEQGKLVRLDNEALTIPIYAYAYRMDTRMSITAENFWRDLKNLFHAR >gi|316919296|gb|ADCU01000010.1| GENE 141 150575 - 151738 1145 387 aa, chain - ## HITS:1 COG:no KEGG:SARI_03063 NR:ns ## KEGG: SARI_03063 # Name: not_defined # Def: isoaspartyl dipeptidase # Organism: S.enterica_arizonae # Pathway: not_defined # 2 387 3 388 390 521 69.0 1e-146 MDLTSAGFTLLRGAQVYAPQALGIQDVLLVAGKVVAIEPQISADVLPDCQIIDLHGLTLC PGFIDQHIHLIGGGGEAGPATRTPEVGLSKLVEAGITTAIGLLGTDSVTRHPEALLAKTR ALNDEGITAYMLTGAYSIPSPTITGSIERDVALIDRIIGVKCAVSDHRSSAPNDSSLANM AAQARVGGLLGNKAGISVFHMGSSKKGLAPLYAILENSDVPMNKLLPTHVNRSETLFDAA IEFALKGGHIDITSGIPGPVTPSQAVKRAVERGVALDLLSVSSDGNGSQPVFDAQGNLTG IGVAGFSSLLETLVALVKEQDMTLADALVPFTRSVAKFLGLETKGEIAVGKDADFVVLTP DLAIHQVYARGRLMVQEGNACVKGTFE >gi|316919296|gb|ADCU01000010.1| GENE 142 151752 - 152216 514 154 aa, chain - ## HITS:1 COG:STM4513 KEGG:ns NR:ns ## COG: STM4513 COG0700 # Protein_GI_number: 16767757 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Salmonella typhimurium LT2 # 1 153 1 153 153 249 92.0 9e-67 MTTQVRKNVMDLFIDGARRGFTIATTNLLPNVVMAFVIIQALKITGLLDLVGQVCQPVMA FWGLPGEAATVLLASLLSMGGAVGVAASLVTAGTLSGHDVTVLLPAIYLMGNPVQNVGRC LGTAEVNAKYYPHIIGVCVINSLLSIWVMQLIVR >gi|316919296|gb|ADCU01000010.1| GENE 143 152221 - 152901 467 226 aa, chain - ## HITS:1 COG:STM4514 KEGG:ns NR:ns ## COG: STM4514 COG3314 # Protein_GI_number: 16767758 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 220 72 286 294 328 79.0 3e-90 MKHQEAELAAPSQKLKVTWVGYFSFFLTIIFFSGMFSGSDGWWRVFDFTVLNGSFGHVNG DSATTAVTFRGVNGTGAKDGFLFALELAPSVILSLGIISVTDGLGGLRAAQQLMTPILRP ILGIPGICSLALIANLQNTDAAAGMTKELAEEGEITEQEKVIFAAYQTSGSAIITNYFSS GVAVFAFLGTSVIVPLGVILLFKFVGANILRVYINFAEHRTVNNKE >gi|316919296|gb|ADCU01000010.1| GENE 144 153059 - 153181 80 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYFAMQKTHSGKKVGYKKRPSTGRLWQGLTCEVPVQQGLT >gi|316919296|gb|ADCU01000010.1| GENE 145 153143 - 153979 427 278 aa, chain - ## HITS:1 COG:YPO2752 KEGG:ns NR:ns ## COG: YPO2752 COG3770 # Protein_GI_number: 16122956 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein endopeptidase # Organism: Yersinia pestis # 4 277 1 273 275 406 75.0 1e-113 MKKMKFWLLGACALAMSAQAMALTPWQQITKPVPGAAQAIGGFANGCIVGANPLPLQADD YQVMRPDQHRYYGHPDLLAFINRLSSEVSQRQMGTLLIGDMAMPAGGRFSSGHASHQSGL DVDIWLQLPKQRWSQQQLLKPKPIDLVAVNGRNVIPALWSDDTGELIKLAAKDDDVTRIF VNPAIKQKLCDTAGADRDWLRKVRPWFAHRAHMHVRLRCPASSLECQDQTPPPAGDGCGA ELASWFQPPPPGSKPSKPSAPPPLYPSCQALLDRHFAG >gi|316919296|gb|ADCU01000010.1| GENE 146 154091 - 155176 1092 361 aa, chain - ## HITS:1 COG:YPO2751 KEGG:ns NR:ns ## COG: YPO2751 COG0082 # Protein_GI_number: 16122955 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Yersinia pestis # 1 361 1 361 361 639 89.0 0 MAGNSIGQFFRVTTFGESHGIALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRR EPDQVRILSGVFEGITTGTSIGLIIENTDQRSQDYGAIKDLFRPGHADYTYEQKYGTRDY RGGGRSSARETAMRVAAGAIAKKYLKEKYGVQIRGCLAQIGDISCEIKDWEQVEQNPFFC PDPSKLEALDELMRALKKEGDSIGAKVTVVAEKVPVGLGEPVFDRLDADLAHALMSINAV KGVEIGDGFAVVNKRGSENRDEITPEGFQSNHAGGILGGISSGQDIIAHLALKPTSSIMV PGKTINRQGEAVEMVTRGRHDPCVGIRAVPIAEAMMAIVLMDHLLRQRAQCGDVVSDVPR W >gi|316919296|gb|ADCU01000010.1| GENE 147 155316 - 156248 1501 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238920643|ref|YP_002934158.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Edwardsiella ictaluri 93-146] # 1 310 1 310 310 582 89 1e-165 MDKIFVDEAVNELHTIQDMLRWTVSRFNAANIYYGHGTDNPWDEAVQLVLPTLYLPMDIP EDMRTARLTLSERHRIVERVIRRVNDRIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGEL IDNRFSGIINHNPSHILDMCTGSGCIAIACAYAFPDAEVDAVDISTDVLSVTEQNIQEHG LDQSVTPIRSDLFRELPPLQYDLIVTNPPYVDEEDMSDLPEEFRFEPELGLAAGSDGLKL TRRILACAPDYLTDDGVLICEVGNSMVHLMEQYPDIPFVWLEFENGGDGVFMLTKQQLID CAPHFALYRS >gi|316919296|gb|ADCU01000010.1| GENE 148 156488 - 157030 455 180 aa, chain + ## HITS:1 COG:ECs3214 KEGG:ns NR:ns ## COG: ECs3214 COG2840 # Protein_GI_number: 15832469 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 175 1 176 183 265 73.0 3e-71 MKKNKTISGEDAALFRESISGARKIAQDTVVHRPKRSTRKIAPEKMLQEQIDASFYFSDE FQPQLDSDGPTRYIRPDANHFELKKLRRGDYSPELFLDLHGLTQMQAKQELGALIAACRR EHVHCACVMHGHGKHVLKQQTPLWLAQHPDVVAFHQASREWGGDAALLVLIEIDEREERR >gi|316919296|gb|ADCU01000010.1| GENE 149 157171 - 157638 507 155 aa, chain - ## HITS:1 COG:sixA KEGG:ns NR:ns ## COG: sixA COG2062 # Protein_GI_number: 16130273 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Escherichia coli K12 # 1 155 6 160 161 186 62.0 2e-47 MRHGEAALEAASDSIRPLTTRGHDESVCMASWLQTQSCKIEKVLVSPYLRAQQTLAAVRE GLALPDDVEVMPELTPGGDAAMVGCYLEALAKTGIGSVLVISHLPLVGYLVSELCPEEAP PMFATSAIAGVSFDVTTERGVFDWQVGPAQVMAKA >gi|316919296|gb|ADCU01000010.1| GENE 150 158033 - 160156 1782 707 aa, chain - ## HITS:1 COG:YPO2747_2 KEGG:ns NR:ns ## COG: YPO2747_2 COG1250 # Protein_GI_number: 16122951 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Yersinia pestis # 324 706 20 423 437 561 68.0 1e-159 MQDAKPSAFRFSVVDNDIGLITIDVPDERVNTLKAEFVQQVDDVLQQAQKHKLQGLVIIS GKPDSFIAGADITMLDACQSEQQARMLAQKGQVTLAKIAALSIPVVAAIHGACLGGGLEL ALACHRRICSLDDKTALGLPEVQLGLLPGSGGTQRLPRLIGASQALDLMLTGRHVRAKQA LKMGLVDDAVPASILLESAIQLARQGWRTRPELPVMERLLNGPLGRSLLFNIVRKKTLAK TQGNYPAAEKIIQVVRQGLEHGSTSGYEAEAKAFGELVMTPESAALRSLFFASTSLKKEA GGTAKPQAIRHVGVLGGGLMGGGIACVTAIRGGLPVRIKDISEKGISHALSYSWDALTKR VRARRMRPSERQKQMQLLSGCTDYSGFHQMDVVIEAVFEDLKLKQQMVADVEHYCAPHTV FASNTSSLPIAQIAALSQRPEQVIGLHYFSPVDKMPLVEVIPHAGTSEVTIATTVALAQK QGKTAIVVGDRAGFYVNRILAPYISEAARCLLEGESINGIDQAMVKGGFPIGPFALLDEV GIDVGTKIIPILVAELGDRFAAPSAFDALIQDDRKGRKNGRGFYLYKNKGKKGKKEVDVS VYPLLRVTPKPQMNEKEIFQRCVMLMLNEAARCLDENIIRSARDGDIGAVFGIGFPPFLG GPFRYMDRLGIDNVVNTLQTLAQRYGSHFAPCDKLLAMQEQNQRFYL >gi|316919296|gb|ADCU01000010.1| GENE 151 160180 - 161508 1147 442 aa, chain - ## HITS:1 COG:YPO2746 KEGG:ns NR:ns ## COG: YPO2746 COG0183 # Protein_GI_number: 16122950 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Yersinia pestis # 7 442 1 436 436 656 84.0 0 MSQALPLSSPLALTTRSGDRIAIVQGLRTPFARQATAFHGIPAVELGNMVVSELLARSNV SPDVIEQLVFGQVVQMPEAPNIAREIVLGTGMSIHTDAYSVSRACATSFQAIANVAESIM AGSISVGIAGGADSSSVLPIGVSKALARTLVDANKARTLSQRLKLFSKLKLRDLLPVPPA VAEYSTGLRMGDTAEQMAKSHHISREEQDALAHRSHTLAAKAWESGVLRDEVITAYIPPY QQSLDKDNNVRGDSTLASYSKLKPAFDRRHGSVTAANSTPLTDGAAAVLMMSESRARELG LTPLGYLRSFAFSAIDVWEDMLLGPSYATPLALDRAGITLQDLTLIDMHEAFASQTLANL KMFASDEFAREKLGRDRAIGEVDMDKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGG GLGLTTACAAGGLGAAMIVEVE >gi|316919296|gb|ADCU01000010.1| GENE 152 161867 - 162163 322 98 aa, chain - ## HITS:1 COG:YPO2745 KEGG:ns NR:ns ## COG: YPO2745 COG3691 # Protein_GI_number: 16122949 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 98 1 98 98 116 66.0 1e-26 MTDAIKKCSAQETAACCCVDVGTIMDNTDCTASYCNVFAQEADAKAMLEQLTQKARGIES DPCVIKSNIVKKAEGYELTVDFTFACEAETLIFQLGLR >gi|316919296|gb|ADCU01000010.1| GENE 153 162569 - 163894 1252 441 aa, chain + ## HITS:1 COG:STM2391 KEGG:ns NR:ns ## COG: STM2391 COG2067 # Protein_GI_number: 16765718 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Salmonella typhimurium LT2 # 1 441 3 437 437 618 71.0 1e-177 MRQKNLFTKSALAAAVALLSSNVNAAGFQLNEFSAAGLGRAYSGEGAMADTPASASRNPA LLSMYDRPAISIGGVFIDPDVDISGRSPSGQSLNAKNIAPTAWVPNFHYVQPINDQWAVG ASVTSNYGLATEFNDNYAAGSMGGTTDLTTANLNLSAAYRANEHFSFGLGFDAVYAKAKI DRYAGDLPLLIGSKLPPPYNSMVGQIPANTQISHLKGDEWGFGWNAGILYEVDENNRFGL TYRSEVKIDFDGDYRSDLPTSVNALANQFGIQGLPMGTGGATVPGSLTLNLPEMWEISGY HKVAPQWAVHYSMAYTSWSQFQELKAKGSNGQTLFYKDEGFKDAYRIAIGTTYFYDDNWT FRTGIAFDDSPVPAGTRSISIPDQDRAWISAGTSYAFNKDASVDVGVSYMHGSKVTINEG PYEFKSVGKAWLYGANFNYAF >gi|316919296|gb|ADCU01000010.1| GENE 154 164149 - 164976 571 275 aa, chain - ## HITS:1 COG:ECs3229 KEGG:ns NR:ns ## COG: ECs3229 COG2853 # Protein_GI_number: 15832483 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Escherichia coli O157:H7 # 24 274 1 250 251 377 72.0 1e-104 MWIVDGGIRLTACHQRSLFMEKDMKLRLTGVALASVLLVGCATNASDSVQGRSDPLEGFN RTMFSVNYNYLDPYLLRPVAVAWRDYVPVPARSGIANFTSNLEEPASMVNSFLEGNVYDG FVHFNRFFLNTILGMGGFMDVASMANPKLAKQEPHRFGSTLGYYDVPYGPYVVLPGYGSA TPRQDGGNYVDYVYPALSWLTFWMSAGKWAIEGIETRAQLLDSDGLLKNSSDPYLFMREA YFQRNDFLATGGELVAPTNPNASAIQDDLKDIDSN >gi|316919296|gb|ADCU01000010.1| GENE 155 165029 - 166240 1306 403 aa, chain - ## HITS:1 COG:YPO2742 KEGG:ns NR:ns ## COG: YPO2742 COG4235 # Protein_GI_number: 16122946 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Yersinia pestis # 1 403 1 408 408 432 59.0 1e-121 MAFWLIVLVLLIAAAALLLVPVLRQPQRDLPEDRDRLNTRFYHQRLKELEQDEEQGVVAE RQAMIEELQQNLLSDVPHAEKAKPEPLNRWVLLPGVVVLVLISVGFYLKTGGLAQVQGWN LVMSEMPSLRERVMNEDKQPLTMEEIARLGLGLRTELQTDPRNVADWVMLGRIGMALNNA TTATQAFSHAYQLAPNEPEVALGYAEVLTRSSDPEDNKQAADMLRDMMARNHEDVRVLSL LAFNAFEQGDYKKAIGAWEMMLKTLPANDSRREVLKRSIEQAKVQSGEDNSLLNVTINLS PDVERQLPPTAVLVVSVTDGATPIPVAVKQLPLGHFPVTVSLSDANAMMPERLLSAQKQV KVRARISRDGLANPQSGDWFGESAVIPYNKESQISVQIEHQVP >gi|316919296|gb|ADCU01000010.1| GENE 156 166243 - 166725 477 160 aa, chain - ## HITS:1 COG:YPO2741 KEGG:ns NR:ns ## COG: YPO2741 COG3088 # Protein_GI_number: 16122945 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in biosynthesis of c-type cytochromes # Organism: Yersinia pestis # 21 156 18 148 170 189 72.0 2e-48 MRAIRLASMLIGVMLSVSAWAAIDTYSFKSVEQEQQYRELTEQLRCPKCQNNSIADSNAI IAADMRQKVYELMEKGYTNKQITEYMVARYGNFVTYEPPLTAATVILWAGPALFVLLGAI VVITRARRRRPEEPEVLGDTLSDAEKQRLKQLLNDSDREH >gi|316919296|gb|ADCU01000010.1| GENE 157 166725 - 167276 531 183 aa, chain - ## HITS:1 COG:YPO2740 KEGG:ns NR:ns ## COG: YPO2740 COG0526 # Protein_GI_number: 16122944 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Yersinia pestis # 4 182 9 187 188 304 85.0 5e-83 MNRKLLFIPLVLFMLLVLAFVIQLQRNAGGEDPTMLESALIGKPVPEFKLESLDKPGKTF DQSVLHDGKPMLLNVWATWCPTCYAEHQYLNKLAAKGIRVVGLNYKDDRQKAVKWLNDLG NPYALSLYDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNDRVWQQEIEPLYRQYE GAK >gi|316919296|gb|ADCU01000010.1| GENE 158 167273 - 169246 1742 657 aa, chain - ## HITS:1 COG:YPO2739 KEGG:ns NR:ns ## COG: YPO2739 COG1138 # Protein_GI_number: 16122943 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Yersinia pestis # 1 648 1 648 656 1073 85.0 0 MIPEIGNFLLALSLALSVLLSIYPLWGAARQDVRMMSSARPLTYGLFFSIAVSFGCLVYA FITNDFTVSYVAANSNTQLPVYFRIAATWGAHEGSLLLWVLLLSCWTLAVALFSRSMPQD SVARVLSVMGMINVGFLLFIILTSNPFTRTLPNFPIDGSDLNPLLQDIGLIFHPPLLYMG YVGFSVAFAFSIASLMAGRLDTAWARWSRPWTTAAWVFLTMGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLAGTALLHSLAVTEKRGTFKAWTVLLAITAFSLCLLGTFLVRSGVLV SVHSFASDPARGMFILAYLVIVIGGSLLLYAVKGAQVRSRTQHEVFSRETFLLGNNVLLV AAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNSMFTWLMAPFALLLGVGPLVRWRRDEPA KFWKRLLMAMIVTVILSVVLPWLMQDRVEGMTVVGLLMAFWVVILTLMELHERATHRYGF WKGLTKLPRSHWGMVLGHLGVAVTVIGIAFSQSYSIERDVRMKSGDSVDIHNYHFVFRDV HDIKGPNYTGGVGIIDVTRDGKPEATLRAEKRYYATARSMMTEAAIDGGLTRDLYAALGE ELNDGAWAVRLYYKPFVRWIWYGGVLMAIGGVLCILDPRYRSRRKEEREQEKLEKTA >gi|316919296|gb|ADCU01000010.1| GENE 159 169243 - 169749 580 168 aa, chain - ## HITS:1 COG:YPO2738 KEGG:ns NR:ns ## COG: YPO2738 COG2332 # Protein_GI_number: 16122942 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c-type biogenesis protein CcmE # Organism: Yersinia pestis # 1 163 1 163 164 253 76.0 9e-68 MNPRRKSRLYLAIVVLLGLGVTITLVLYALRSNIDLFYTPTEILQGKGENHEKPEVGQRL RIGGMVMPGSVKRDQQSLKVSFKIYDAHGAIGVTYEGILPDLFREGQGVVAQGVMGENNV VHAKEVLAKHDEKYTPPEVKEAMEQNHNRPADAYQQNGGSSDAGSPQP >gi|316919296|gb|ADCU01000010.1| GENE 160 169746 - 169985 251 79 aa, chain - ## HITS:1 COG:YPO2737 KEGG:ns NR:ns ## COG: YPO2737 COG3114 # Protein_GI_number: 16122941 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Heme exporter protein D # Organism: Yersinia pestis # 1 67 1 67 100 74 68.0 5e-14 MTPAFSSWQDFFAMGGYAFYVWLSVAATLIPLLLLVCHTRWQRRQILTEIRRHQAREQRI KQAQGQQRASSVSQGEQSL >gi|316919296|gb|ADCU01000010.1| GENE 161 169985 - 170740 626 251 aa, chain - ## HITS:1 COG:YPO2736 KEGG:ns NR:ns ## COG: YPO2736 COG0755 # Protein_GI_number: 16122940 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Yersinia pestis # 1 239 1 239 245 368 81.0 1e-102 MWKWLHQLAKPERLYHLCGKFVPWLGLAGAACLLIGWIWGFGFAPSDYQQGNSYRIMYIH VPAAIWSMGIYASMAIAAFIGLVWQMKMSDLVSAAMAPVGAVFTFIALATGSAWGKPMWG TWWVWDARLTSELVLLFLYLGAIALYNAFEDRRTAGRAAGILVLVGVVNLPIIHFSVEWW NTLHQGSTNMQNTIDPSMRYPLRWAIFGYLFFFITLTLMRLRNLILMQERRRPWVNALVN TRQNNQHKERS >gi|316919296|gb|ADCU01000010.1| GENE 162 170951 - 171610 705 219 aa, chain - ## HITS:1 COG:HI1090 KEGG:ns NR:ns ## COG: HI1090 COG2386 # Protein_GI_number: 16273018 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Haemophilus influenzae # 5 218 6 219 221 221 71.0 6e-58 MIGTILRRELKIAFRNGAEIINPLWFFLIVITLFPLSIGPEPQLLARIAPGVVWVAALLA ALLSLERLFKDDYLDGTLEQLMLTPSPLALTVLAKVFAHWLVTGLPLLILSPLVALLLSF DFATWWAVALTLLLGTPTLSFIGSIGVALTVGLRKGGVLLSLLVLPLYIPILIFATSAID AASMGMPIGGYLAILGAMLAGSVTLSPFAAAAALRVSVQ >gi|316919296|gb|ADCU01000010.1| GENE 163 171607 - 172227 631 206 aa, chain - ## HITS:1 COG:YPO2734 KEGG:ns NR:ns ## COG: YPO2734 COG4133 # Protein_GI_number: 16122938 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, ATPase component # Organism: Yersinia pestis # 1 203 1 206 218 260 62.0 1e-69 MLNISLLACSRDERVLFSQLSFQVEAGEMVQIEGPNGAGKTTLLRMIAGLSQPDRGDIQW QQKSIRKQREEYQQQMIYLGHQAGVKSVLTPFENLAFYQAVQGEHNQDAIWDALAQVDLI GYEDVPVAQLSAGQQRRVALARLWLSKATLWILDEPLTAIDKSGVAKLIALFEKHTQAGG IILLTTHQDLDYRMRKLRLSGEEVSR >gi|316919296|gb|ADCU01000010.1| GENE 164 172625 - 174313 1284 562 aa, chain + ## HITS:1 COG:SMa0306 KEGG:ns NR:ns ## COG: SMa0306 COG2986 # Protein_GI_number: 16262618 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Sinorhizobium meliloti # 13 550 16 542 546 392 41.0 1e-108 MKKTVLALTLAGLFLSPTVWSATSGITLDGHSLTLEDAWEIAYSNKEVHIAPAAMKKVEE ANQLLMTAASKGIPVYGLTVGVGLNKDKSLFDAHGKLTPEAIAASKAFNVNALRAHGAGI GPAMPDELVRMAMVIRLNTLLVGRTGAQPQVATLYQQLLNNHITPVVPSQGSVGEADITL ASHIGDVMMGEWKVHVNGHEQDAASALQAAGITKLDPIGKDALSILSTNAISAAYSAQAL LAAKQIINVTPEVFGLSLEGLNGNVAPFLPQSLSVRPFPGVQDTAKVMREVLKGSYLWQH QDGRALQDPLSYRTTVFVLNEAHKEWAEAYQMLSIQMNSSDDNPAVIVNADKSLIGNSQV AQYYVHDGKVNGAIFPTSNFEPLPLTLAIQNLSVAMGHLAHNSVQRTLHLSDDHFTGLSR FLAGEENNGHAFGAIQKPQVAMLADIRSLVNPVSLDGQPMAGSIEDTYTNNLQASTRLTK IADDMRYIYGLELLHASQAIDLRKHKNPDITLGEQTGKLYSSYREKVKFVDKDRIFSDDI ENSAKLLQQYPALPLIREGHNE >gi|316919296|gb|ADCU01000010.1| GENE 165 174306 - 175877 1034 523 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 11 504 3 473 484 185 29.0 2e-46 MNNKINNSRRNFITKGTLFTTGAAFAAFSGSVSAASCSNDNAIRYHRVYDVIVVGSGFAG LAAALEAVNLGRSVLVIDKMPVCGGNSTINGGAVAVANSPLQQKEGIVDSPELMYKDMLK AGRGLNDKEQLTILVNNTTAAYEFTLKHGVVYKPFVQHFGGHSVPRTLQTVESSGAGIVM PLKNSAMRLGVMFRTRCKLLGFDQNAQGRVIGISVRDGYRFPDETSGEIRHYGARYGVVM CSGGFSNDLRFRKMQNPRLDEKVDSTNHPGATSECLVQMLRIGAIPVQLDLIQLGPWSSP DEKGFGYVSQFNTISGFPNGIMVNPRTAKRFTNELADRKEREDGILAQVDQDGNPLYPIC FTTLDGAKQAQSLTHALHYKVAWQFDTLQQLADHFGMPYATLKSEVDEYNAAVARKGGDR MHKDVSRAVPLDKGPFVAVRVWPKVHYVMGGVKINVKAEVLNAADSTPIPGLYAAGEATA GSHGGSRLGSCAVADCLVYGRIAGASVGAAEPCDDFPATDKDA >gi|316919296|gb|ADCU01000010.1| GENE 166 175879 - 176307 219 142 aa, chain + ## HITS:1 COG:no KEGG:Spea_3370 NR:ns ## KEGG: Spea_3370 # Name: not_defined # Def: tetraheme cytochrome c # Organism: S.pealeana # Pathway: not_defined # 38 141 20 125 126 94 50.0 1e-18 MTKQLLFFLVMVISCLSLNCAAADNTANNEALYHDKLNSMHAKPYHQTLEAMGKDNSCQL CHGTKTPVSSPNDSNCLNCHGSRDQVAALTLPDPKDKNAEPNPHNSIHYGKDASCTMCHN EHKPSEIYCNNCHLFKYPNMKP >gi|316919296|gb|ADCU01000010.1| GENE 167 176317 - 177972 470 551 aa, chain + ## HITS:1 COG:STM2063 KEGG:ns NR:ns ## COG: STM2063 COG4117 # Protein_GI_number: 16765393 # Func_class: C Energy production and conversion # Function: Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) # Organism: Salmonella typhimurium LT2 # 339 548 41 244 254 176 44.0 2e-43 MTNLSMKHQIKRGLLFAILLLSQVYAWADPPALSVTASQQNQSCLSCHSDTDIHSIVTSK AHDKLQLSAEDYQESVHGGLPCIACHQSAPNSQGFDATPHQLAPQQNTRCEGCHAVMLHD TITAENASVHQQKIEQGQFTCTACHDAHTMSSGVISHPSKTQIAKSNQTCINCHSRAGVY SQLAKGKSATKQDLAHKMLPYSEQHLASLRCIDCHVAANDETLHKILPASQAVTCEQCHS NSALLIQRQKTDIALFPSTPGSLLGKGLFDDSQLQKKLANLPVTGEKTEQVQTVKGTLFS NTYMIGSNGSNHWDKLYLYALVTFIGLLICHGLGRVIGRKLLKRSHENASEDKIYLYTLL VRCWHWLNALCCITLLVSGIALHFVTQRFATWVNIHNIAGLTLCAIWVLFIIAALSGNGH HYLVRWRGISARLYRQTSYYLIGIFRGEPHPEHPSQQSKFNILQQLGYIGIMFALVPLLI VSGLLMLFPEYSPTKIFGWPGKQIIAYLHYALALIMLMFVIVHLYLCTTGDSLGALIKGM IDGFHRSKKMK >gi|316919296|gb|ADCU01000010.1| GENE 168 178053 - 178337 114 94 aa, chain - ## HITS:1 COG:BS_acoR KEGG:ns NR:ns ## COG: BS_acoR COG3284 # Protein_GI_number: 16077877 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; K Transcription # Function: Transcriptional activator of acetoin/glycerol metabolism # Organism: Bacillus subtilis # 1 93 498 603 605 58 37.0 4e-09 MLWDYQWPGNISELIHVIENSSISFPGGELICDLPKIKAQGGLLPLEDAMREHIIKALRQ ANGKISGKNGAAQILGINSNTLYSKIKKLRISAR >gi|316919296|gb|ADCU01000010.1| GENE 169 179072 - 179503 190 143 aa, chain - ## HITS:1 COG:no KEGG:SO_3059 NR:ns ## KEGG: SO_3059 # Name: not_defined # Def: formate hydrogenlyase transcriptional activator, putative # Organism: S.oneidensis # Pathway: not_defined # 12 131 13 132 508 86 35.0 2e-16 MDSAISFLHTALCSSAQIEKSMQACIHAIPEDFSCDGIFLNYYRHDIRSIQFIALSSHKA ARLKRDLIPIPEYIAEQFEKNQNIEIQLINDLKQDLLTEYVVGRGFRNIKSIILMRMSLD GIRLGAVGFLAISLKLMLLSMWP >gi|316919296|gb|ADCU01000010.1| GENE 170 180829 - 181506 198 225 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLINNEKRNRKVSIITDNEYLKLGLLSILSELDPKSFVGNAIFIDVDSLKLMSDFGTLLK NAYANRASVILICAGGDMSMVLERLPHIDINEKLSLWPRDITTLLRSNLTYYFIKEFNDL ICVKKLGAMKMAIILMVNKGWTFSLIARTLKISHKTLYRYTGGLVSYFNVKNINFLFYFL RSRFPPSYFDSRLTDYSPRAPLLSFVAGKVLAKGQARITTQLTQP >gi|316919296|gb|ADCU01000010.1| GENE 171 181565 - 182023 237 152 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|284007883|emb|CBA73807.1| ## NR: gi|284007883|emb|CBA73807.1| hypothetical protein [Arsenophonus nasoniae] # 9 152 16 166 166 129 49.0 8e-29 MNMGSSKFLILGSICLLAACSSQPAKKPQGNNHTTAAATTGYKNTSTPADNYIAKRTATL TGITLASTNNICVDHFNFLREVQSNQYQKYTKDYGDIGKGYRFLNVNKNIMDNDAKQVYT MMLEMKLDTLCSKVQYTGYSVVKDKIKELSSI >gi|316919296|gb|ADCU01000010.1| GENE 172 182505 - 186477 2805 1324 aa, chain + ## HITS:1 COG:no KEGG:YPO3944 NR:ns ## KEGG: YPO3944 # Name: not_defined # Def: putative invasin # Organism: Y.pestis # Pathway: not_defined # 1 1324 166 1445 3013 572 40.0 1e-161 MQAGQILSSDNVTNASINYAKSIGEGLINQQINDWLNQKGTARFSAGSDQKISGDLLLPI IGNTDSLLFTQLGLHSNEDRNTANVGMGYRQYIGDWMYGINTFYDYDYTGKNARLGVGGE AWTDYLKLAVNGYYGLTDWHQSRLSAMKDYDERPANGFDLRAEAYLPSYPQLGANLKYEQ YFGKGIDLGTGTHPDDLKDNPKALTFGLNYTPIPLVTLKGEHSVGDKDDSRIGIDVNYRF GVPWARQISADSVDALRSLMGSMYEFVDRNYEIVMQYRKQDLLRISLPNTVTAKAAETIT LPLTVSKAKYGLKDVEWTASAEFLANGGTFRELSLTQLEVTLPPYVYTKRANAAQEYVIK AVGVDNNGNNSNTAATTIKVEPSKNIISDLTITPSGSVPANDADYFTVTASVLDEHSQPM TAQPIKFDIDNMKGEDGRSAATLFKDGNTNSQALTVNTDSRGKATVYVRSKLAKQGVVTA TMNNGNYKSGQVDFIADAATAQISALDIIKNKALADGQSSNKLQVTVKDINGNPLANSQV DLSATNGATIVNGSTVMTDAEGQAILLVTNTTIGDSTITARINGSSKTQVVTFVADKSTS TITQGDLTATQDAVANGTDTNLVTAKVTDANANTVSDVTVHFTVSNGAKIITVKGVTGDD GLATAKVTSLKADTYTVTARIQESGNSAQTNTRFIPDSSTATIIDSNLNINPNGALADGV DTDAVEAIVTDANGNLVPNASVNFIVATGATITTVIGTTGTDGKATATVTSTTAGKYKVT ATVSGRSVSKDAIFVADNGTAAIVAGNLKVTADNALANGTATNAVQAKVTDANGNVVPNV AVSFSANNGATVTTASAITNESGLATTTLSNTTSGVTNVVAAINGTSQNVNTNFTPDGST ATIVKGDLQVTQNDATANGSDTNAVQAKVTDANGNVVPNATVTFSANHGATVTTESVTTN PQGLASTTLTNTQSGTTQVTATVNSHSQQVDTNFVADGSTATITKANLVVTSDNAKADGH ATNAVQAKVTDANGNLVPNAVVSFTADNGATIVNASVTTGSDGLASTTLTNIQTGIAKVT ATINSHSQTVDTTFKADDGTATIISGNLTVTTDNAKANGTATNAVQAKVTDANGNVVPNM AVTFAANNGATITTASANTDENGLAATTLTNITAGISKVTATINGNSQSVDTTFVADDGT ATIIAGALTVTADNAKANGTATNAVQAKVTDANGNVVPNVAVTFAANNGATITTASANTD ENGVATTTLTNITAGISKVTATINGNSQTVDTTFVADDGTATIISGNLTVTADNAKANGT ATNA Prediction of potential genes in microbial genomes Time: Wed May 18 15:08:14 2011 Seq name: gi|316919294|gb|ADCU01000011.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.11, whole genome shotgun sequence Length of sequence - 1723 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 1723 1453 ## EcSMS35_4024 putative invasin Predicted protein(s) >gi|316919294|gb|ADCU01000011.1| GENE 1 1 - 1723 1453 574 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_4024 NR:ns ## KEGG: EcSMS35_4024 # Name: not_defined # Def: putative invasin # Organism: E.coli_SECEC # Pathway: not_defined # 2 574 1425 1980 2933 259 43.0 2e-67 KVTATINGNSQTVDTTFVADDGTATIISGNLTVTADNAKANGTATNAVQAKVTDANGNVV PNVAVTFAANNGATITTASANTDENGLAATTLTNITAGISKVTATVNGNSQTVDTTFVAD GGTATIVNGDLTVTIDNAVADGTDTNAVQAKVTDANGNVVPNVAVTFTANNGATVTTASA MTGSNGLASTTLTNTKTGISRVSAAINSTSQSVDTTFIADGGTSTIIDGNLTVTTNNAKA DGADTNAVQAKVTDANGNVVPNVAVSFIADNGATVTSTSATTNQQGLATTTLTNTTSGVS KVTAKINGHSQTVDTTFVADGGTATIVNGDLTITIDNAVANGTDTNAVQAKVTDANGNVV PNVAVTFAANNGATVTTASANTDENGLAATTLTNITAGISKVTATVNGNSQSVDTTFVAD DGTATIVAGALTVTADNAKANGTATNAVQAKVTDANGNVVPNVAVTFAASNGATITTASA NTDENGLATTTLTNITAGISKVTATINGNSQTVDTTFVADDGTATIIAGALTITIDGAKA NGADTNAVQAKVTDANGNVVPNVAVTFAANNGAT Prediction of potential genes in microbial genomes Time: Wed May 18 15:08:42 2011 Seq name: gi|316919239|gb|ADCU01000012.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.12, whole genome shotgun sequence Length of sequence - 65092 bp Number of predicted genes - 54, with homology - 53 Number of transcription units - 32, operones - 11 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 59 - 2200 1589 ## YPO3944 putative invasin + Term 2231 - 2272 8.1 - Term 2279 - 2320 3.0 2 2 Tu 1 . - CDS 2329 - 2571 246 ## gi|284007883|emb|CBA73807.1| hypothetical protein - Prom 2791 - 2850 4.9 3 3 Op 1 . - CDS 2860 - 3339 130 ## 4 3 Op 2 . - CDS 3332 - 4078 133 ## COG3710 DNA-binding winged-HTH domains - Prom 4326 - 4385 10.8 5 4 Op 1 9/0.000 + CDS 5108 - 6016 784 ## COG2103 Predicted sugar phosphate isomerase 6 4 Op 2 . + CDS 6019 - 7470 1138 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 7507 - 7547 5.8 7 5 Tu 1 . - CDS 7547 - 9001 900 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes + Prom 9234 - 9293 5.6 8 6 Tu 1 . + CDS 9362 - 9997 518 ## COG1280 Putative threonine efflux protein + Prom 10386 - 10445 6.6 9 7 Tu 1 . + CDS 10536 - 10889 170 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 10896 - 10956 5.0 - Term 10851 - 10890 -0.9 10 8 Tu 1 . - CDS 10946 - 11458 592 ## COG4574 Serine protease inhibitor ecotin - Prom 11612 - 11671 4.5 - Term 11621 - 11655 4.4 11 9 Tu 1 . - CDS 11690 - 13258 1764 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 13310 - 13369 6.2 12 10 Op 1 . - CDS 13472 - 15340 1556 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold 13 10 Op 2 . - CDS 15368 - 15910 307 ## COG3224 Uncharacterized protein conserved in bacteria 14 10 Op 3 . - CDS 15979 - 16620 567 ## COG1335 Amidases related to nicotinamidase + Prom 16778 - 16837 5.3 15 11 Tu 1 . + CDS 16999 - 17907 570 ## COG0583 Transcriptional regulator 16 12 Tu 1 . - CDS 17927 - 18835 515 ## COG0583 Transcriptional regulator - Prom 18861 - 18920 2.6 + Prom 18825 - 18884 3.9 17 13 Tu 1 . + CDS 18955 - 19713 206 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 19746 - 19781 7.1 + Prom 19834 - 19893 10.8 18 14 Tu 1 . + CDS 20063 - 21709 1383 ## COG0840 Methyl-accepting chemotaxis protein - Term 21805 - 21834 2.1 19 15 Op 1 . - CDS 21924 - 22766 575 ## COG3016 Uncharacterized iron-regulated protein - Prom 22791 - 22850 4.4 20 15 Op 2 4/0.286 - CDS 22857 - 23321 480 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 23333 - 23369 1.8 21 15 Op 3 1/0.571 - CDS 23394 - 25673 2181 ## COG0281 Malic enzyme - Prom 25756 - 25815 9.4 - Term 25835 - 25873 7.1 22 16 Tu 1 . - CDS 25882 - 26451 658 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 26498 - 26557 3.1 23 17 Op 1 7/0.000 - CDS 27340 - 27969 708 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 24 17 Op 2 4/0.286 - CDS 27981 - 28442 294 ## COG3043 Nitrate reductase cytochrome c-type subunit 25 17 Op 3 7/0.000 - CDS 28439 - 29305 596 ## COG0348 Polyferredoxin 26 17 Op 4 10/0.000 - CDS 29305 - 30057 553 ## COG1145 Ferredoxin 27 17 Op 5 10/0.000 - CDS 30079 - 32571 2368 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 28 17 Op 6 11/0.000 - CDS 32568 - 32834 192 ## PROTEIN SUPPORTED gi|167855983|ref|ZP_02478730.1| 50S ribosomal protein L31 type B 29 17 Op 7 . - CDS 32831 - 33355 382 ## COG1145 Ferredoxin 30 18 Op 1 8/0.000 + CDS 33785 - 35467 1202 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific 31 18 Op 2 . + CDS 35551 - 36183 594 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Term 36047 - 36097 2.0 32 19 Tu 1 . - CDS 36247 - 36522 262 ## COG4519 Uncharacterized protein conserved in bacteria - Prom 36721 - 36780 13.4 + Prom 36977 - 37036 5.3 33 20 Op 1 7/0.000 + CDS 37071 - 37640 381 ## COG3539 P pilus assembly protein, pilin FimA + Term 37653 - 37712 14.6 + Prom 37695 - 37754 4.2 34 20 Op 2 10/0.000 + CDS 37780 - 38472 127 ## COG3121 P pilus assembly protein, chaperone PapD 35 20 Op 3 6/0.071 + CDS 38481 - 41036 1141 ## COG3188 P pilus assembly protein, porin PapC 36 20 Op 4 . + CDS 41026 - 42201 624 ## COG3539 P pilus assembly protein, pilin FimA + Term 42222 - 42263 4.5 + Prom 42225 - 42284 2.9 37 21 Tu 1 . + CDS 42437 - 45583 2336 ## COG0841 Cation/multidrug efflux pump + Term 45632 - 45671 5.7 + Prom 45855 - 45914 2.7 38 22 Op 1 9/0.000 + CDS 46157 - 46543 319 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 39 22 Op 2 3/0.286 + CDS 46540 - 47670 1027 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 40 22 Op 3 . + CDS 47667 - 48332 443 ## COG1876 D-alanyl-D-alanine carboxypeptidase + Term 48354 - 48381 -0.1 + Prom 48464 - 48523 6.2 41 23 Tu 1 . + CDS 48621 - 48806 205 ## Dd703_1078 hypothetical protein + Term 48836 - 48865 1.4 - Term 48819 - 48860 2.3 42 24 Tu 1 . - CDS 48872 - 49558 628 ## COG0400 Predicted esterase - Prom 49697 - 49756 7.5 - Term 49824 - 49868 -0.9 43 25 Tu 1 . - CDS 49871 - 52660 2195 ## COG3468 Type V secretory pathway, adhesin AidA 44 26 Tu 1 4/0.286 - CDS 53004 - 54950 708 ## COG1444 Predicted P-loop ATPase fused to an acetyltransferase - Prom 55004 - 55063 2.9 45 27 Tu 1 5/0.286 - CDS 55082 - 55960 714 ## COG2321 Predicted metalloprotease - Prom 56010 - 56069 4.3 - Term 56089 - 56131 7.3 46 28 Tu 1 . - CDS 56288 - 57001 771 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase - Prom 57071 - 57130 10.0 - Term 57108 - 57147 -0.8 47 29 Op 1 9/0.000 - CDS 57166 - 58218 979 ## COG3317 Uncharacterized lipoprotein 48 29 Op 2 . - CDS 58235 - 59116 769 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 59138 - 59197 2.3 + Prom 59169 - 59228 6.5 49 30 Op 1 4/0.286 + CDS 59260 - 59832 380 ## COG2716 Glycine cleavage system regulatory protein 50 30 Op 2 . + CDS 59832 - 60302 660 ## COG1225 Peroxiredoxin + Term 60325 - 60362 9.4 - Term 60312 - 60350 9.6 51 31 Tu 1 . - CDS 60370 - 61434 1217 ## COG0628 Predicted permease - Prom 61512 - 61571 2.8 52 32 Op 1 6/0.071 + CDS 61813 - 63297 1269 ## COG4783 Putative Zn-dependent protease, contains TPR repeats 53 32 Op 2 . + CDS 63307 - 63663 358 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 54 32 Op 3 . + CDS 63677 - 64270 335 ## PROTEIN SUPPORTED gi|227991484|ref|ZP_04038550.1| acetyltransferase, ribosomal protein N-acetylase + Term 64273 - 64304 -0.9 Predicted protein(s) >gi|316919239|gb|ADCU01000012.1| GENE 1 59 - 2200 1589 713 aa, chain + ## HITS:1 COG:no KEGG:YPO3944 NR:ns ## KEGG: YPO3944 # Name: not_defined # Def: putative invasin # Organism: Y.pestis # Pathway: not_defined # 5 418 1746 2161 3013 209 45.0 4e-52 MTDGLSGNVVPNVAVAFAANNGATITTASANTDENGLAATTLTNIAAGISKVTATINGNS QTVDTTFVADDGTATIIDGNLTVTTDNAKANGTATNAVQAKVTDANGNVVPNVAVTFAAN NGATITTASANTDENGLAATTLTNITAGISKVTATINGNSQSVDTTFVADDGTATIIAGA LTITIDGAKANGADTNAVQAKVTDANGNVVPSVAVTFAANNGATITTASANTDENGLATT TLTNFTAGISKVTATINGNSQTVDTTFVADDGTATIIAGALTVTADNAKANGTATNAVQA KVTDANGNVVPNVAVTFTADNGATVTTTSANTDENGLAATTLTNVTAGVSKVTAAINGHS QTVNTTFVADITTAIVTEVTLVDTVTDKIANGTDFFTFDALVKDAHGNLVPNATVTWSQD KGNSVVLPSSSETDVNGKATIALKSTKTEALLIQVSAAIGSGAAVNADKKVNFKAQLVTL HGATTNAVNNAVVPNTKIELFLSQSDTTPAYSATSGSDGKYAISNIPQGVYYAKASATGF ITQDATVDIQDVTDLEQNFVLSPNLDGKAARIVLTWGSTPADLDSYLWVPTVGAPNTMIK VNYGSKAPAGADAVLDVDARNGYGPETITVNSLHPGVYCYVVNRFSATPQAYGDAKVKLY LSDGTTQDFKIEDAGSTGDMANWTVFKIDTTSGQTDVSVINSINSSSNRGECS >gi|316919239|gb|ADCU01000012.1| GENE 2 2329 - 2571 246 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|284007883|emb|CBA73807.1| ## NR: gi|284007883|emb|CBA73807.1| hypothetical protein [Arsenophonus nasoniae] # 1 80 87 166 166 81 53.0 2e-14 MDNYNFLREENAPQYPRYAEDYNKITEGFKFLNSNKNIMDKDAKKIYTMQLKMKLETLCS KIQYSSFILVNEKRHNLSDI >gi|316919239|gb|ADCU01000012.1| GENE 3 2860 - 3339 130 159 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNNKIIVLAILSFTLIFEIVYVSVIYEPSYNFSCNNEFSYRDDESHDILDGNIFLSLNNK MQGHAEIIGYLARNGTSQDIIRSVDFKYRVISPKKLVIYDARLVTYSHDSVDESFAPEPI LDFLFFRYKDLKEININVNKVKNTYLFGHANNFVFACTS >gi|316919239|gb|ADCU01000012.1| GENE 4 3332 - 4078 133 248 aa, chain - ## HITS:1 COG:STM3759 KEGG:ns NR:ns ## COG: STM3759 COG3710 # Protein_GI_number: 16767043 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Salmonella typhimurium LT2 # 1 134 32 166 285 68 28.0 1e-11 MIYKISDTVRFKPADGAIWSIDSPEQVINLTITNCNLLCMLLNNKGAILSRENILEDIWD KQGLRSSNNTLNQYISILRRTFSLLGIDEEVIKTIPKVGFCFNEAISVEKEYSPVSSEIA TRESAPKERTQYYFYGVMMSILTLCILALIAYVLSQNKKFSLETSTTGVGQYDACEIRVL PQYTRGQSRYLLEASTDLIKRNNIKCLPGKEFISKPESRGSGRAFLAECVVDKKGNEYFF VKDTIQNE >gi|316919239|gb|ADCU01000012.1| GENE 5 5108 - 6016 784 302 aa, chain + ## HITS:1 COG:VC0206 KEGG:ns NR:ns ## COG: VC0206 COG2103 # Protein_GI_number: 15640236 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Vibrio cholerae # 1 297 6 302 305 367 71.0 1e-101 MNIDLSHLQTEGRNTASENIDTLSTLDMLTIINQEDQKVALAVERILPQIAQAVDAITHA FAQGGRLIYCGAGTSGRLGILDASECPPTYGTPREQVIGLIAGGQTAILRAVENAEDNVA LGEQDMIENQVGERDVVVGIAASGRTPYVIGAMKYARTQGATVVSLTCNANSAMSQLADI ALEAVVGPEVVTGSSRMKAGTAQKMVLNMLTTGSMIRSGKVYGNLMVDVEATNAKLVQRQ VDIVMQATDCDRSTAIKALSECERHCKTAILMILGQLSAAEASAVLTQNNGFIRQALGAK GV >gi|316919239|gb|ADCU01000012.1| GENE 6 6019 - 7470 1138 483 aa, chain + ## HITS:1 COG:PM1575_2 KEGG:ns NR:ns ## COG: PM1575_2 COG1263 # Protein_GI_number: 15603440 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Pasteurella multocida # 109 483 1 375 375 461 68.0 1e-129 MAKITDATIAQILACIGGSQNIALCGNCMTRLRLTLRERSLVDHAKLKKIPSVMGVIEGN DQLQIVLGPGKAQTASEMMNILLAQNHASQEIEAKPADLHTLAAANKQQLKSKQRSGFHS FLTQFATIFTPLIPGFIAAGLLLGIATLLQQTLVLEGSTAPLWLTSLIGYMKIFSVGLFT FLSILIGFNTQKAFGGTGVNGAIIASLFILRYSTEGTVGYYAGIDNFFGLVIDPRGNIIG VLLACMFGAWIERKVRKIIPDNLDMILTSSITLLITGAVTYVVIMPIGVELFKGMSWLFL HLNGNPFGTALLAGLFLIAVVFGIHQGFVPVYFALMDAQGFNSLFPILAMAGAGQVGAAL ALYLKAKPASTLRLQIKGAIFPGLLGIGEPLIYGVTLPRLKPFITACFGGAVGGFFIGLV AYMGLPIGLNTVFGPSGLVSIPLMTSSQGIYAGIMVYIAGVFISYAAGFIFTLLFGCKNV DLT >gi|316919239|gb|ADCU01000012.1| GENE 7 7547 - 9001 900 484 aa, chain - ## HITS:1 COG:STM1148 KEGG:ns NR:ns ## COG: STM1148 COG1502 # Protein_GI_number: 16764504 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Salmonella typhimurium LT2 # 8 484 22 494 494 535 55.0 1e-152 MSNKPAIETRLARLIQPLCQLHPELSGVYPLEKGNDAFAARYLLANMAEKTLDVQYYIWH NDISGRLLFNALFRAAERGVKVRLLLDDNNTGGLDESLRRLNAHPNISVKLFNPFKLRRM RCLCYLTDFKRLNRRMHNKSMTFDGQATIVGGRNVGDEYFGIGDQALFSDLDVLAVGKVV EDVCQDFERYWHSACVSPAEDVLGKASDYRYLHGLTIAEVGGRARAKEYLKRLRDKLLAR QMENNQLSLTWAKVQLFSDDPRKGLGELATKALMASRLFEMIGVPKISMDIISAYFVPTR TGVSQLVHLSKQGVKITVLTNSLAANDVAIVHAGYAKWRKMLLRCGIELFEMKANETEDV TRNDRLRDRGLTGHSGSSLHAKTFAVDGKLVFVGSFNFDPRSARLNTEMGFVIQSESLTT LTHQRFIASLHDKAFQLILTRRRKIHWIEYENGKEYIHRKEPDSPLYKRILARIAYYLPI EWML >gi|316919239|gb|ADCU01000012.1| GENE 8 9362 - 9997 518 211 aa, chain + ## HITS:1 COG:ECs2507 KEGG:ns NR:ns ## COG: ECs2507 COG1280 # Protein_GI_number: 15831761 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 209 1 209 212 232 61.0 4e-61 MFESYGVLNIWTYVLGAIFIIMVPGPNTLFVLKTGITRGVREGYKAALAVFIGDAVLIFC AYIGIASLIRSSPFLFSLVKMLGALYLLYLGLKILYSTLAKKGQEQSAAKEEPEHTFRKA LTLSLTNPKAILFYVSFFVQFIDMDYAHTGVSFAILAVILEMISFCYMTLLIFSGAALAH FLSEKKRLAKLGNSLVGLLFLGFATKLATSA >gi|316919239|gb|ADCU01000012.1| GENE 9 10536 - 10889 170 117 aa, chain + ## HITS:1 COG:YPO0456 KEGG:ns NR:ns ## COG: YPO0456 COG2207 # Protein_GI_number: 16120785 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 10 109 6 105 288 121 51.0 3e-28 MSTKGQHQLLVESLSEWIEQNLDKRIVIDDIAERAGYSKWYLQRLFKEVTGDNLASYVRH RRLMRAAAELKRTDKKIMDITLQYGFDSQQTFTRAFKRRFGTSPGIFRQTPSPSTDS >gi|316919239|gb|ADCU01000012.1| GENE 10 10946 - 11458 592 170 aa, chain - ## HITS:1 COG:YPO1211 KEGG:ns NR:ns ## COG: YPO1211 COG4574 # Protein_GI_number: 16121502 # Func_class: R General function prediction only # Function: Serine protease inhibitor ecotin # Organism: Yersinia pestis # 1 170 1 169 169 231 67.0 4e-61 MNKISAVLASLLLASSAGAIAATAESHEDISKQPLEKVAPYPQAEKGMSRQVIYLPKQEN ENNFKVELMIGKTMEVDCNHHMMGGKLESKTLSGWGYDYLVMDKISEPASTMMACPDNTK RSEFVIANLGDAAMQRYNSRLPIVVYVPQGVDVKYRVWQADAKLQDSVKK >gi|316919239|gb|ADCU01000012.1| GENE 11 11690 - 13258 1764 522 aa, chain - ## HITS:1 COG:ECs0897 KEGG:ns NR:ns ## COG: ECs0897 COG0488 # Protein_GI_number: 15830151 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 522 9 530 530 939 87.0 0 MQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTLMKILGGDLVPSGGNVFLDPNERLGK LRQDQFAFENYTVIDTVIMGHTELWDVKSERDRIYALPEMTEEEGYKVADLEVVYGEMDG YSAESRAGELLLGVGIPVEQHYGLMSEIAPGWKLRVLLAQALFSNPDILLLDEPTNNLDI DTIRWLETVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQAR ERLMSDNAKKKAQISELQSFVSRFSANASKSKQATSRARQIDKIKLDEIKASSRQNPFIR FEQDKKLFRNALEIDGLSKGFDNGPLFKNLRMLLEVGDKLAVLGTNGVGKSTLLKTLVGE LQPDTGFAKWSENANIGYYAQDHESEFAEDLTLFDWMSQWKQPNDDEQVVRGYLGRLLFS QDDIKKSVKVLSGGEKGRMLFGKLMMQRPNILVMDEPTNHMDMESIEALNMALEMYEGTL IFVSHDREFVSSLATRILEITPTKTIDFSGNYEDYLRSQGAE >gi|316919239|gb|ADCU01000012.1| GENE 12 13472 - 15340 1556 622 aa, chain - ## HITS:1 COG:PA2699 KEGG:ns NR:ns ## COG: PA2699 COG1574 # Protein_GI_number: 15597895 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Pseudomonas aeruginosa # 5 622 3 612 612 969 74.0 0 MSQNASLILTNGQFHTLDRENPLVDAVAIKDGKILAASSTAKVMSFAGDETQIVDLKGHT VIPGLNDSHLHLIRGGLNYNLELRWEGVPSLADALRMLKEQADRTPSPQWVRVVGGWTEF QFAECRMPTIEELNEAAPDTPVFVLHLYDRALLNRAALKAVGYTKDTPNPAGGEIVRDAK GNPTGMLIAKPNAMILYATLAKGPKLPLEMQVNSTRQFMRELNRLGVTSAIDAGGGFQNY PEDYEIIQQLHDEKQMTVRIAYNLFTQRPKQELDDFQKWTDMLTPGQGSDFYRANGAGEM LVFSAADFEDFLQPRPDLPEDMEDELERVVRHLVENRWPFRIHATYNESISRMLNVFEKV NREIPFSDLHWIFDHAETITEQNIERVKALGGGIAVQHRMAFQGEYFAERYGMDAVKQTP PISKMLEMGVPVGMGTDATRVASYNPWTALYWLVSGRTVGGMAMYDDNNRLSRDVALELW TAGSAWFSNEQGKKGRIQAGQLADMVVLSQDFFSVPEEAIKGIESVMTIVDGKVVYAAGA FTPLAPPPIPVVPEWSPVVSVPGHYRSAPPVANKTGVMAQTHQCCGSCGVHGHSHDKARK SAIPVSDEQAFWGALGCSCFSF >gi|316919239|gb|ADCU01000012.1| GENE 13 15368 - 15910 307 180 aa, chain - ## HITS:1 COG:DR2141 KEGG:ns NR:ns ## COG: DR2141 COG3224 # Protein_GI_number: 15807135 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Deinococcus radiodurans # 4 180 8 184 184 101 33.0 8e-22 MSATNTVTLAITHNLQPNQAKSYEEWLARIMPAAQQFQGHLGVHVIRPSAGSDAYNIVIR FDTLDNLYAWINSEQRKTLVAEIAPILAQAEHYEVRTEPEFWFTPSSPTVKKPKKWKQFL ITLLVIFPSTNLVPRVTGTLFPTLKGSLALHLINDACVVGLVVFMWMPLVTRIFAGWLKK >gi|316919239|gb|ADCU01000012.1| GENE 14 15979 - 16620 567 213 aa, chain - ## HITS:1 COG:RSc0242 KEGG:ns NR:ns ## COG: RSc0242 COG1335 # Protein_GI_number: 17544961 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Ralstonia solanacearum # 5 213 7 216 228 291 65.0 5e-79 MSIRELIDPQNSTLIFIDHQPQMAFGVANIDRQTLKNNTVALAKAGKIFNVPTIYTSVET KSFSGYIWPELLAVHPDIKPIERTSMNSWEDKAFVEAVKATGRKKLIISALWTEVCLTFP ALMALEEGFEVYVVTDTSGGTSVDAHERAVERMVQAGAVPVTWQQVMLEYQRDWSRKETY DAVMDLVREHSGAYGMGVDYAYTLVHGAPERKA >gi|316919239|gb|ADCU01000012.1| GENE 15 16999 - 17907 570 302 aa, chain + ## HITS:1 COG:ECs2817 KEGG:ns NR:ns ## COG: ECs2817 COG0583 # Protein_GI_number: 15832071 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 300 8 307 316 332 53.0 8e-91 MRVNLDVLLILDALEKHGSFAAAAESLFKTPAALSYMVQKLESDLSIKLLDRSGHRAKFT DTGKVVLEKGRVLLSAARDLEKQAIQIESGWEKELTIAIDGSFPFHLLLPMIEEFYQLGC LTQLRFTHHTLSGSWEQLTQNDADIILGAINEPPTSTEFSYRMLGMLENVFVVSPAHPLA KIDESLDPTLIGTHRAIVIGDTAKFSTGQTTNYLQEQERMVVYDFNHKLLALISGLGCGF MPRHIVEPYLKSGVLIAKQTTSSRQKDLAYLGWCNTSEGIASRWWREKILNSELIQHMYS HD >gi|316919239|gb|ADCU01000012.1| GENE 16 17927 - 18835 515 302 aa, chain - ## HITS:1 COG:STM3607 KEGG:ns NR:ns ## COG: STM3607 COG0583 # Protein_GI_number: 16766893 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 2 298 1 296 299 322 55.0 7e-88 MMDKISAMQVFVSVAELSSFSRTAERLGLPKGSVSGAIQQLENQFGTQLLHRTTRKVTLT QDGHRCYERCKGLLADIDELESLFRTSSAPLSGRLRVDMPSGLAKIVIQQSLAEFLMAHP ELELELSSSDRRVDLIQEGFDCVVRVGALQDSGLIARPLGQLQMVNCASPAYLQKYGCPQ NATDLQSHQMVHYQNAQVGHSDRFEYVTAQGDVQQVEMQGALTVNSTESYSAACIAGLGI IQVPIIGVRHALDTGTLVAILPQLSPPAMPVSLLYPHRRNLARRVQVFMDWMSDIIRQQY VQ >gi|316919239|gb|ADCU01000012.1| GENE 17 18955 - 19713 206 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 1 248 1 238 242 84 27 2e-15 MSNKIALITGASRGLGKSMALHLAAQGIDVIFTYRTQQQEAENVAQQIQQAGAKSAALPL DVSQISTFADFRQRLEQTLKQQWGRHTIDFLVNNAGIGINAPFAETSEQQFDQLMNIQLK GPFFLTQTLLPVMIDGGRILNISTGLSRFVLPGFAAYAAMKGAMEVLTRYQAKELGARGI SVNILAPGAIETDFGGGVVRDNKDVNAFIASQTALGRVGLPEDIGKAVSMLLSDNAHWVN GQRIEASGGMFL >gi|316919239|gb|ADCU01000012.1| GENE 18 20063 - 21709 1383 548 aa, chain + ## HITS:1 COG:ECs2595 KEGG:ns NR:ns ## COG: ECs2595 COG0840 # Protein_GI_number: 15831849 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli O157:H7 # 1 514 1 513 533 307 43.0 5e-83 MFERLKISQGLMGVLALFCIIQIFSGVWSILDASGTNNRLTQISSGFNQIMAMDNAYASV TEIREEVLKDALMLATQPQSNDAKKSLGELRQRLTEVDQMMEKFYQLSHSNQSENERTKN VKNLYEKARGDLLQLIISLENSDIARFQSIMHNSSAMHFMSALDDTSAYVANDIITPAAD AAQASYRQMVPLSLTFIFVFVLLTGAVLVWIRKYVLNKINQVIDYQAEIAHGNLAIEINA SGNNEIGKLMQGLSHMRNELANTVSAVRAGTQNIYTGVQEIAAGNSDLSSRTEEQASSLE ETAASMEQLSATVKNNAESASAATSLVKRASQSAVNGGEITRKMVVTMSDIADSSRKIGD ITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAQAAKEIKTLIDA SVLRVGQGNDLVENVSVAMTEIVTSIGQVTETMQEISSASEEQSRGIAQIAQAVNEMDKV TQQNAALVEQSASAASALEDQADRLNQTVSLFKLSSSAPAVVRVQPQATPALKLKAVVED NGENWDSF >gi|316919239|gb|ADCU01000012.1| GENE 19 21924 - 22766 575 280 aa, chain - ## HITS:1 COG:PA4705 KEGG:ns NR:ns ## COG: PA4705 COG3016 # Protein_GI_number: 15599899 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated protein # Organism: Pseudomonas aeruginosa # 33 275 39 279 295 221 49.0 1e-57 MKKIGLLAAAFLLSACGIGQHTQTIHAVPQDNIVDLHSGQKLTPQQLLAKLGDRPRVIVG EKHDNLQHHQIEQWLVESLPRQRTQGSVLMEMITPSQQDKVNAVKDQLKQGKTLTGQQIT EQTAWQKGWTWELYSGVTTAALAGSYPLLSANLDRSEIKKFYEHPLAVTGALSTQPSVRE AIAKTIEESHGGKLEPKQAKAMLAIQQQRDRRMAESLLAAPTPALLIVGGYHANRALGVP LHVEDIAPMTELTVVMLAEEGVKVDKSNADFVWYTRKAKP >gi|316919239|gb|ADCU01000012.1| GENE 20 22857 - 23321 480 154 aa, chain - ## HITS:1 COG:NMA0248 KEGG:ns NR:ns ## COG: NMA0248 COG0454 # Protein_GI_number: 15793266 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Neisseria meningitidis Z2491 # 12 153 19 160 163 110 38.0 1e-24 MLIEKIDDNSPYIPQIAALLHWEWSSLPRWSTQEGIQQRFIKRNHVDSEEFTLVAYVEDG QLLGTASVIVHELDDRPERRFWLGEVFTPPEHRGKGVGSALTKACVAQAQQKGIKQLYLY TPDQQKLYQRLGWKEIEKREVSGEWVSVMSLDLG >gi|316919239|gb|ADCU01000012.1| GENE 21 23394 - 25673 2181 759 aa, chain - ## HITS:1 COG:YPO3034_1 KEGG:ns NR:ns ## COG: YPO3034_1 COG0281 # Protein_GI_number: 16123211 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Yersinia pestis # 1 434 1 434 434 778 91.0 0 MDEQLKQSALDFHEFPIPGKIQVVPTKPLATQRDLALAYSPGVAAPCLEIAADPLAAYKY TARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKLI DVVAALEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFHDDQHGTAIICTAAVLNGLRV VKKQISDVRLVVSGAGASAIACLNLLVALGLKRENITACDSKGVIYQGREENMAESKRAY AIKDNGWRTLSDAIPNADIFLGCSGPGVMTQDMVKTMARDPLILALANPEPEILPPLAKA VRPDAIICTGRSDFPNQVNNVLCFPFIFRGALDVGATTINEEMKLACVHAIADLALAEQS DVVASAYGDQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMDSGVATRPIEDFDAYIEHL TEFVYKTNLFMKPIFSQAKKEKKRVVLAEGEEERVLHATQELVTLGIASPILVGRPDVIE MRLKKLGLQIEAGKDFEIVNNESDPRFNEYWREYYDIMKRRGVSQEQARRAVIGNPTLIA AIMLQRGEADAMICGTIGNYHEHYEVVHNVFGFREGAHVAGAMNALLLPSGNTFIADTYV NDDPTAEQLAEITLMAAETVRRFGIEPKVALLSHSSFGASDCPAARKMRRTLELVNEAAP ELEIDGEMHGDAALVESIRNDVMPDSPLKGAANILIMPNMEAARISYNLLRVSSSEGVTV GPVLMGVSKPVHILTSIASVRRIVNMVALSVVEAQTKPL >gi|316919239|gb|ADCU01000012.1| GENE 22 25882 - 26451 658 189 aa, chain - ## HITS:1 COG:STM2477 KEGG:ns NR:ns ## COG: STM2477 COG0494 # Protein_GI_number: 16765797 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 3 188 5 190 191 257 64.0 1e-68 MKIEMISNRVLSDHWAVLRQYTYDLTRHNGGTIRQMREVYDRGNGATLLLYNVEQKSVVL IRQFRIPTYLNGNSDGLLIETIAGLLDNDAPEDCVRREAMEETGFEVGEVTKVFEAYMSP GGVTEIIHFFVAPYTNSQKKSDGGGIEDEDIEVLELPFQQALDMIRDGQIKDGKTIMLLQ YAQIQGWMS >gi|316919239|gb|ADCU01000012.1| GENE 23 27340 - 27969 708 209 aa, chain - ## HITS:1 COG:YPO3036 KEGG:ns NR:ns ## COG: YPO3036 COG3005 # Protein_GI_number: 16123213 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Yersinia pestis # 12 209 3 200 200 377 85.0 1e-104 MLDNKEVDNKPTEQKKPGIIRRVWQWWRRPSRLALGTLLLLGFVAGIIFWGGFNTGMEMA NTEKFCISCHEMRDNVYQEYMDTVHYTNRSGVRATCPDCHVPHEWVPKIVRKIKASKELY AKAFGLIDTPQKFEAHRLVMAENEWARMKANDSQECRNCHNFEYMDFTAQKTVAGKMHDQ AIQDGKTCIDCHKGIAHKLPDMKGIKNGF >gi|316919239|gb|ADCU01000012.1| GENE 24 27981 - 28442 294 153 aa, chain - ## HITS:1 COG:ECs3092 KEGG:ns NR:ns ## COG: ECs3092 COG3043 # Protein_GI_number: 15832346 # Func_class: C Energy production and conversion # Function: Nitrate reductase cytochrome c-type subunit # Organism: Escherichia coli O157:H7 # 1 153 8 156 156 223 70.0 1e-58 MKSNVLKKHASLWAMLQAVVLSLSVAGAVYAASDVDLSQSPEVSGTAEGQIKMPKQQERM ALNYVNQPPMIPHSVDGYQISKNTNRCLQCHGVEHYRTTGAPRISPTHFMDANGKVLGEV APRRYFCLQCHVPQSDAPPIVGNSFQAAPGFGQ >gi|316919239|gb|ADCU01000012.1| GENE 25 28439 - 29305 596 288 aa, chain - ## HITS:1 COG:STM2257 KEGG:ns NR:ns ## COG: STM2257 COG0348 # Protein_GI_number: 16765585 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Salmonella typhimurium LT2 # 1 280 1 280 289 384 64.0 1e-107 MANSASQAGRDARQRYGFIRSHRWLLLRRLSQLAILMMFLSGPWFGVWILKGNYSGSLLL DTVPLTDPLMMLESLFAGHWPALTALAGALVIVAIYALIASRAFCAWVCPLNPVTDLAAW MRRKLNIRQSASLPRGLRYGILLAVLAGSAVSGTLLWEWLNPVALLGRSLIFGAVGGLWL IVAVFLFDLLVTEHGWCGHICPMGALYGVIGAKAMVRVSAEHREKCTRCMDCFHVCPESQ VLREPVLNNDHSPLVLSKDCISCGRCMDVCAEHVFEFKNRFHRSGAKE >gi|316919239|gb|ADCU01000012.1| GENE 26 29305 - 30057 553 250 aa, chain - ## HITS:1 COG:PM1595 KEGG:ns NR:ns ## COG: PM1595 COG1145 # Protein_GI_number: 15603460 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Pasteurella multocida # 9 247 8 248 250 359 73.0 2e-99 MTQQRDKRPARRRFLRDAVRSAGGLAGLALVLGLQQKQSQARDGLALRPPGALPDGEFER ACIRCGQCVQACPYDTLKLATLLSPSSAGTPYFVARQTPCEMCEDIPCVVACPSGALDPH LTDIDDARMGLAVLLDHENCLNWQGLRCDVCYRVCPSIDKAITLELHRNERTGVHAKFLP TVHSDACTGCGKCEQACVLDEAAIKVLPLSIARGELGRHYRLGWEEKEKAGHSLVPSGTQ LPSRMPQGGE >gi|316919239|gb|ADCU01000012.1| GENE 27 30079 - 32571 2368 830 aa, chain - ## HITS:1 COG:YPO3038 KEGG:ns NR:ns ## COG: YPO3038 COG0243 # Protein_GI_number: 16123215 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Yersinia pestis # 1 830 1 830 830 1537 85.0 0 MKLSRRDFMKANAVAAAAAAAGLTIPTVAKAVVGGADEIKWDKAPCRFCGTGCGVLVGTQ NGRIVASQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLLRMKNGQYNKEGEFTPVTW DQAFDVMEEKFKTSLKEKGPTSVGMFGSGQWTVWEGYAASKLFKAGFRSNNIDPNARHCM ASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAEMHPILWSRITNRRLTDQNVKVA VLSTFEHRSFELADNPIIFTPQSDLVILNYIANYIIQNNAVDQEFMKQHVNIRKGATDIG YGLRPTDPLEKAAKNPGSDASEPMSFEDYKAFVSEYTLEKTAEMTGVPKDSLESLAKLYA DPNIKVVSYWTMGFNQHTRGVWANNLCYNIHLLTGKISKPGCGPFSLTGQPSACGTAREV GTFSHRLPADMVVTNEKHRQIAENTWKLPAGTIPEKVGLHAVAQDRALKDGTLNAYWVMC NNNMQAGPNINADRMPGWRDPRNFIVVSDPYPTVSALAADLILPTAMWVEKEGAYGNAER RTQFWHQQVKAPGEAKSDLWQLMEFSKRFTVEDVWPAELINSKPELKGKTLFDVLYANGN VNKFKLEEIPADQLNDESRDFGFYVQKGLFEEYASFGRGHGHDLAPFDEYHKARGIRWPV VNGKETLWRYREGFDPFVKVGESVRFYGKPDGKAVIFALPFEPAAEVPDKEFDLWLSTGR VLEHWHTGSMTRRVPELHRAFPEAVLFIHPLDAKQRGLRRGDKVKVSSRRGELVSIVETR GRNRVPQGLVYMPFFDAAQLVNNLTLDATDPLSKETDFKKCAVKVEKVTA >gi|316919239|gb|ADCU01000012.1| GENE 28 32568 - 32834 192 88 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855983|ref|ZP_02478730.1| 50S ribosomal protein L31 type B [Haemophilus parasuis 29755] # 6 82 16 92 94 78 46 8e-14 MSNEMWHVCGLVVQAKPEAVPAVADALAAMPETEVAAIEQEKGKLVVVMQSEDSNALLDR IESARNVAGVLAVSLVYHQQDEQGEDTP >gi|316919239|gb|ADCU01000012.1| GENE 29 32831 - 33355 382 174 aa, chain - ## HITS:1 COG:YPO3040 KEGG:ns NR:ns ## COG: YPO3040 COG1145 # Protein_GI_number: 16123217 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Yersinia pestis # 1 155 1 158 167 173 57.0 1e-43 MTTLSRRNLLSARWRKPASAQRPPWTIAEPAFIAGCTRCHSCIEQCETGVLIAGDGGFPA IDFHRAECTFCRRCAEACELPLFELHREQPWTIRAEIQGNCLTQKGIECRSCQDACEPYA IRFAPHLSGIAKPIIDLDTCTGCGECVRGCPVDAIRVMPAASSVQDDTAERNEV >gi|316919239|gb|ADCU01000012.1| GENE 30 33785 - 35467 1202 560 aa, chain + ## HITS:1 COG:narQ KEGG:ns NR:ns ## COG: narQ COG3850 # Protein_GI_number: 16130394 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Escherichia coli K12 # 1 559 1 556 566 536 52.0 1e-152 MLVKRSVTSTIAKTLAAIVILSVLSTGIALVTVASSLSDAEAVNIAGSLRMQSYRLAYDL TNQPQDVDLHLKEYEQSMQAPALKKLDRFYVPASVRSEYHHLLSTWHVLDQQLKAGDTTK YLSDVARYVSQIDHFVLVLQHYSEQKMQQVVAISLLGVFAIIGLVWFAIHTTRREVVAPL NKLVNASQRMQSGYFSPMQLDVNLPNEIGVLSKTFIRMSSELEKLYRSLEDKVQEKTESL MQANKSLGVLFDCSQALTVSEITQPSFEKVLNIVRTSEALSYLELEVHDSGNGRWLLHSG QLEDSKPTSSIALMLDGHRLGELRWPKGQHAQQQLMQNVANMLSRGIYFNRAQKQQVQLL LMEERATIARELHDSLAQALSFLRIQITLLKRSIPTENTQAQGIIRDFDQALSDAYRQLR ELLATFRLTIQEADLREALHQLLAPLKLQTESIITLNCALSSQSLNAQQQVHVLQIVREA VLNAIKHAQAKHIEIRCHYGPKGESVISIQDDGVGIASLEEPDGHYGLTIMAERATRLGG ELMIRAREPAGTEVSLVFQH >gi|316919239|gb|ADCU01000012.1| GENE 31 35551 - 36183 594 210 aa, chain + ## HITS:1 COG:YPO3041 KEGG:ns NR:ns ## COG: YPO3041 COG2197 # Protein_GI_number: 16123218 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Yersinia pestis # 3 208 2 207 209 294 76.0 8e-80 METENYAVMIVDDHPLMRRGIRQLLELDPTFDVVAEASSGSEAIALASRAQPDLILLDLN MKGLSGLDTLKALRNEGVDARIIILTVSDSRSDVYALVDAGADGYLLKDSEPEILLSQIH QAASGKNVFSDTISEYLSSRTELTDPFADLTERELDVLQEVARGLSNKQIASQLHISEET VKVHIRNLLRKLDVRSRVAATVLYLENKNQ >gi|316919239|gb|ADCU01000012.1| GENE 32 36247 - 36522 262 91 aa, chain - ## HITS:1 COG:YPO3042 KEGG:ns NR:ns ## COG: YPO3042 COG4519 # Protein_GI_number: 16123219 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 91 1 91 92 136 70.0 8e-33 MDFNPVFARRLYLCWLLSHIEKPNVPHLMQVTGWPRRTLQDVLKALPGMGIELDFVQEGV RNNDGYYRLKSWGPLNDKWISDHAQQLLAAI >gi|316919239|gb|ADCU01000012.1| GENE 33 37071 - 37640 381 189 aa, chain + ## HITS:1 COG:Z4971 KEGG:ns NR:ns ## COG: Z4971 COG3539 # Protein_GI_number: 15804092 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 EDL933 # 1 188 5 177 178 70 33.0 1e-12 MKRNVFIAMTILSSATVFAAEDNAGKIHFTGEIIEPSCVIIGDGGTNEYKIPLGTYPTSF FSSIGTESDLVPVGIILEDCPLRSDGLPNIQLTFTGPFALTNSNTLLDVSKITTSGATAA TGVGIALSPSNLDTTFIKVDGSEGQLVLGLPAMPTDRVNATFNARYKSFASTVTAGPADA DLTINIVYH >gi|316919239|gb|ADCU01000012.1| GENE 34 37780 - 38472 127 230 aa, chain + ## HITS:1 COG:yraI KEGG:ns NR:ns ## COG: yraI COG3121 # Protein_GI_number: 16131035 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 4 227 8 230 231 188 46.0 7e-48 MRILIPTVFSILCILSGFSHAAGVQIGRTRIIYDASKKEVALPLINKEKDLPWLIQSWID TGDGKTRGPFIITPPLFRLDPQKEQNLRITWSGKTLPTDRESLFYMNIRTIPAMAKDDDD KNVLRLIYKTRLKLFWRPKGLHDTPIDTCKNLRFIRRDNQLLITNDGDYYSVFDSLKVGG KLMENIEMVAPKSTTQSQLSDTAKGSNVIWRCISDYGNATNEFTTNLTQG >gi|316919239|gb|ADCU01000012.1| GENE 35 38481 - 41036 1141 851 aa, chain + ## HITS:1 COG:ECs4022 KEGG:ns NR:ns ## COG: ECs4022 COG3188 # Protein_GI_number: 15833276 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 33 832 36 828 838 700 46.0 0 MAAKGLRQRFSRPNLQSHRLLRGLSGLLLVAISNVSAREFYFSPSSLEGDGLSQQDIDLS LFSKENGQLPGAYQTKIMINKKLIDDKTINYINNKNGALLPQLSPQQLRQWGVRVDAYPS LAKLPSSEPLIDPIDKYIPFASATFDFNAMTLRISMPQAAIDTHHSTDVDPSRWNDGAPV LFADYAFSGSRRENSDHTSNDTQYLNLRSGANFGGWRLRNYSTWSQSNNTQSWQAINTWI QHDIHLLKAQFIAGENSTRGEVFDSLQYRGINIASDDEMLPYNQRGFAPIIRGIASSNAE ISVRQNGYVIYQANVAPGAFEITDLYSTTNSADLEVTVKEADGTEHRFIQPYSSVAVMQR PGNIRYEVTLARYQADDNLTANEPLFAQGSAIYGLNNYLTFFGGVTFSPDYQAFNGGTGV LLGDLGAISTDVTWAQARLDNDEQQNGQSWRLMYTKKIETTDTNLTLASYRYSTSGYYSF ADANEKYDDSDTDWSFRYNKRSRLQLNLNQTILDSSLYVSGYQQDYWQTSRKERSVTSGL SRVIGDISVNIAYTYSKTSDEKSDQMMSLGFSVPLAKWLPKSWVSYNINASKRGDTSHNV GLNGTVLDDDRLSYSLQQSHTNHGGGDNSSVYGGYRSQYANVNAGYYYASDNSRQLTYGV SGAVVAHPLGVTLSQPLGEQFAIVSAKGASGVRFTNQRGVRTDFFGNAIIPSLTPYQENV IRIDTTSLPDDIDTDATTMTVVPSRNAAVSTQFTAHIGYRALITLTRPDGRIIPFGAVAT VDGLSLSGIVDDHGELYLSGVGEHIALTVQWGSSPEQRCHADVVFPSSSEATVGGIHQAS VLCKPDVNHAK >gi|316919239|gb|ADCU01000012.1| GENE 36 41026 - 42201 624 391 aa, chain + ## HITS:1 COG:STM0174 KEGG:ns NR:ns ## COG: STM0174 COG3539 # Protein_GI_number: 16763564 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 196 391 169 359 359 82 29.0 2e-15 MQNKKTTAHAAFFQRCKLCLVLIFSIFPLFSQAATTVLQNCFPAPVTYTIHTDTELPSEE NHDGYSANVNDHIAGNGPAIVANCTCPYNLYASTAIYETTAGGSPLPPGTNGYGYLTEHL DIDVTAYGDAIDSPDGHGLPPINVDTYPTPIAGMYSTNEVQLRHTEGTSDVCSDATRPAD ASTTKRSFKWNILAFKFYIKKAILGEEIIPSTVIVQNYACLSFGNYCSVTDTQWVSSIQV TGKLTAPLSCTINAGSTIEVELGNIVTSQFVSQGEPPTNYTLKDVDITYHCDDPAAANAG KIKFSLTADQGVAAGSNNLIAKMLDRDDIGVRMFDQNNNDIVLDGSLDLPITLDSQGNGK ISMTAAPVSTTSSRPQPGKFEGNVTVKMELR >gi|316919239|gb|ADCU01000012.1| GENE 37 42437 - 45583 2336 1048 aa, chain + ## HITS:1 COG:YPO3043 KEGG:ns NR:ns ## COG: YPO3043 COG0841 # Protein_GI_number: 16123220 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Yersinia pestis # 1 1047 1 1043 1043 1638 80.0 0 MANFFIDRPIFAWVIAIIISLTGLLAINTLPVEQYPNLAPPTVRISASYPGASAQTLENT VTQIIEQNMTGLDGLLYMSSQSSSTGSASITLTFQAGINPNEAMQQVQNQLQGATRKLPQ DVQQQGVTVSKSGDSSLMTVAFVSTDHSMTRQDIADYVASNLQDPISRIDGVGSVDAFGS QYAMRIWLDPNKLNNYKLTTQDVVTAIKTQNNQIAVGQVGGTPSVNGQALNATMNAQSQL QTPEQFRDITLRVNTDGSYVTLGDVATVELGAENYDYLSRYNGMPASGMSIKLASGANEL ATDKLVKAKLTELEQYFPHGLKVEYAYETTPFVQESIKDVVKTLFEAIFLVFLVMYLFLQ NFRATLIPTIAVPVVLLGTYAVLYAFGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM AEEGLSPREATRKSMAQIQSALVGIALVLSAVFVPMAFFGGTTGAIYRQFSVTIVSAMVF SVLVALILTPALCATLLKPIKKGEVHGQKGFFGWFNRVFERSTHQYENGVARIVRNSGRT MLLYLLIIVGLAFAFTRLPTSFLPLEDRGVFMTQIQLPVGSTQQQTLKVVEKVENYLLQS EKKNVVSVFSIIGSGPGGNGQNVARMFVRLKHWDERSNPDDSSFAIIDRATAEFNKIKEA RVFASSPPAISGLGNSAGFDMELEDHAGLGHAELMKARDTLLAAAAKEPQLTRVRHNGLD DSPQLQVNIDQRKAQALGVNIDDINNTLKTAWGSTYVNDFLDRGRVKKVYVQSAAPYRML PSDIYSWYVNNNNGEMVPFSAFANSQWTYGSPRLERYNGNAALEIVGEAATGISTGTAMD IMERLVSHLPNGIGLEWTGMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSIPFSVM LVVPLGVLGAVCATWVRGLENDVYFQVGLLTIIGLSAKNAILIVEFANELHRSGKDLLEA TLEACRLRLRPILMTSLAFIFGVLPMAISHGAGSGSQHAVGTGVLGGMFTATILAIFFVP VFFILVRRRFPGKTASAIEPDEIIPPKE >gi|316919239|gb|ADCU01000012.1| GENE 38 46157 - 46543 319 128 aa, chain + ## HITS:1 COG:STM2482 KEGG:ns NR:ns ## COG: STM2482 COG1393 # Protein_GI_number: 16765802 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Salmonella typhimurium LT2 # 12 124 4 117 118 163 70.0 7e-41 MTANLEKAPLYLYGIKNCDTIKKARKWLEEQQVVYQFHDYRADGLEPALLHTFIAQLGWE ALLNTRGTTWRKLDESLRNSITDADSAAALMLEHPAIIKRPLLAHNDHMLLGFKPEQYAH FLAEEKIR >gi|316919239|gb|ADCU01000012.1| GENE 39 46540 - 47670 1027 376 aa, chain + ## HITS:1 COG:STM2483 KEGG:ns NR:ns ## COG: STM2483 COG0624 # Protein_GI_number: 16765803 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Salmonella typhimurium LT2 # 1 376 1 375 375 621 77.0 1e-178 MTCPVLELTQQLIKCRSVSPEDAGCQELLIERLQTIGFTIEDMTFGDTRNFWAYRGGNGP TLAFAGHTDVVPSGDESKWTNPPYEPTLRDGMIYGRGAADMKGSLAAMVVAAERFIEANP HHQGRLAFLITSDEEASAVNGTVKVVEKLIARQEKVEYCLVGEPSSTEKVGDVVKNGRRG SMTANLYIQGVQGHVAYPHLADNPIHKAAPMINELVNEVWDEGNEFFPPTSMQIANIAAG TGSNNVIPGELYIQFNFRFSTESTVDSIKTRVKALLDRYQLTYSLEWNVSGLPFLTARGH LVDAVVNAIQHYGEITPQLLTTGGTSDGRFIAQMGTQVVELGPVNATIHKVDECVHAADL QMLSRMYQRIMEQLVA >gi|316919239|gb|ADCU01000012.1| GENE 40 47667 - 48332 443 221 aa, chain + ## HITS:1 COG:YPO3054 KEGG:ns NR:ns ## COG: YPO3054 COG1876 # Protein_GI_number: 16123231 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Yersinia pestis # 2 221 6 225 225 312 68.0 3e-85 MITPEMLTGQSTEHLAVLCGNHRLQPEAVKAFQALQCAAKEAGFNLQPASTFRDFARQQT IWNAKFNGERAVLDENSQPLNITTLTNGELCCAILRWSALPGASRHHWGTDLDIYDPDLL PDGKKLQLEPWEYLEGGYFYPLNQWLSDNMDRFGFYRPFGDKQQGVAVEPWHLSYRPLSS LAEHQLTKEVLKKAWQDKHIAGSEWLIPHLSEIFSRFIAIK >gi|316919239|gb|ADCU01000012.1| GENE 41 48621 - 48806 205 61 aa, chain + ## HITS:1 COG:no KEGG:Dd703_1078 NR:ns ## KEGG: Dd703_1078 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii # Pathway: not_defined # 1 61 1 61 62 82 72.0 4e-15 MQWLADYWWIILLVLIGMVWNGMKALLKVDHKSFLSNKPELPPHRDNNAQWDNDDDWPKK K >gi|316919239|gb|ADCU01000012.1| GENE 42 48872 - 49558 628 228 aa, chain - ## HITS:1 COG:ECs3335 KEGG:ns NR:ns ## COG: ECs3335 COG0400 # Protein_GI_number: 15832589 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 223 9 233 240 254 57.0 8e-68 MKHEHHVVQSPATPAEQLILLFHGVGDNPVSMGTIGEYFAQAFPKALVISIGSPYQIPSG QGLQWFSVDGVTEENRIERINEVMPQFIEIVRYWQRVADVNPEATALVGFSQGAIMALEA VKVTPNLAGRVVSFSGRFAALPEKSLGNTVVHLIHGSEDTIIAIDNAHQAAESMQTYGSD FTLDIEPIGHAIDQNMMDLALERLRAYIPQRYWDEALSGKRGDLIAFK >gi|316919239|gb|ADCU01000012.1| GENE 43 49871 - 52660 2195 929 aa, chain - ## HITS:1 COG:STM0373_2 KEGG:ns NR:ns ## COG: STM0373_2 COG3468 # Protein_GI_number: 16763753 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Salmonella typhimurium LT2 # 510 929 34 467 467 424 60.0 1e-118 MSSWKNKTALTRLALACSMAIAAQAAVAATNDISGTTYDTYGHDLGYGNHVYVNDTFNAG SYVDGYVDYDGYVGWNNSTDGYYDGDIYPVINKSVVNGVISTYYLGYDSSNTADTLNISN STIHGMVTSSCVTDECANDTDHQLGTLQLTVDNSTIDDTYEHYDYDVTTNDVRDHDLYNT YAMGNAITLDQEANVVIQNNSHVAGITLVQGYYWPDSATNSPEIFTDTVTVKDSVVTSGA YSELDNTGFYGQSGKPSDYAGTSTAGLDDAALIVMASRTDNAMQTTATFDHSTLTGDVLF SSVFDNNFDPTGHDSNGDNVKDTNGWDDQDSLNLTLTNGSKWVGAAVSSVEHTNTLYDYS PNSLWPTDEFDVNGDFTSASVYQSGLFNVTLDNSSEWDTRKTSNIDTLTINNGSQVNVVN SSLLADSITLNNGSSMQIGDSNSAGTTIPNSYGYNNGVATDSLNINSGSQVILTEETAAL YANTITVTNGGELNLGLGQTDTHSLVLSDAGTLNVGSREYVLNSDMSNARYVTNDVNAAG YDHGVIAINSDGHLAVNGDVSGNYSVRVDNATGQGSIADYQDKEIVRVYDNNADTSASFT AANRADLGAYTYEAEQRGDTVVLDQRNLTDAANMALSIPSANANIWHMEQDTLERRQTQT RDNAGDTGGAWVSYFGGHVNGDGGEINYDQDINGIMVGVDKVIDGNYANWLVGMSAGFAK GDVSDHSGSVDQDSQSARVYSSAKFDNNVFLDTSLSYSHYSNDLDADMSNGDHTSGSTSS DAWGFGLKVGYDIALDTQGKLSPYASVSGLFMNSDDYRTSNGMDVSDQGYNSLRYEAGIN ANYRFDYANDQSLTPYATLAYVYDDAGSNDADINGDNIDNGVGGSAVRVGLGGQFNFTKN FSTYAGASYMGGSDIDQPWAVNAGVKYSW >gi|316919239|gb|ADCU01000012.1| GENE 44 53004 - 54950 708 648 aa, chain - ## HITS:1 COG:YPO3056 KEGG:ns NR:ns ## COG: YPO3056 COG1444 # Protein_GI_number: 16123233 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase fused to an acetyltransferase # Organism: Yersinia pestis # 1 599 12 620 699 608 51.0 1e-173 MQRMGIRRVLIVSGDTTWHRQVIEENLSSLQPNVLWVGENAPEGTASIATRAARGLLGQE LAHVVFNAAEGVNAEALAAVSGAMSAGHWLILLVPDWEQWPCLPDMDSLRWSEQAEPIAT PYFVRHFQRVTSQHPDIIVWKQGAPKKITELQIARPEWQRPDGSPTREQEAILRALLTND DSVSVVIGERGRGKSTLAGMFAARTAGVCWVTGPNRVSTQVLSQCGKKGEFHAPDMLLEQ CRQKVPENVDWLLIDEAAAIPAPMLSELISFFPHVLLTTTVQGYEGTGRGFLLKFCSSLP SCQIYSLEQPMRWALHDPLEAWVGSLLLFAEPQEPFEHGQKLKQKKLSQNEWHSSPQVMS DFYALLTSAHYKTTPLDLRRLMDGVGNHLHASFVDSNIVAALWAVDEGGLDESLAKAVWA GERRPKGNLVAQSLAAHGGQWVAAVLRSRRISRIAVFPEWRRQGVAKSLVAAVVHQARQE QLDFVSVSFGYTPELHQFWQRCGFQLVRFGTHLEASSGCYTAMAILPLSEKSQPLLRRLQ LRLQRDGYFIEKKLNIRLPINVKKDLSLNQDDCDELHGFAHCYRPFDVSVYALSRYANHL SDDELSCFLKSCINESGDVRGLCDKYKISGKKELITRLRTVLASILNN >gi|316919239|gb|ADCU01000012.1| GENE 45 55082 - 55960 714 292 aa, chain - ## HITS:1 COG:YPO3058 KEGG:ns NR:ns ## COG: YPO3058 COG2321 # Protein_GI_number: 16123235 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Yersinia pestis # 1 290 1 287 288 448 78.0 1e-126 MRWQGRRESDNVEDRRGDSTGSSGGFGGGGFRVPRGKGGLILLVVVLVAGYYGVDLTPLL NGEAPMGQTQQHSQPANSAQDNQMAKFTSVILASTEDTWSQLFQKMGKQYQDPKLVLYRG ATRTGCGTGQSVMGPFYCPADKTVYIDLSFYQEMKNKLGADGDFAQGYVVAHEVGHHVQN LLGIEQKVRQMQQGASKAEQNRLSVKMELQADCFAGVWGHNMQNQQVLEAGDLEEALNAA QAIGDDRLQQQSQGRVIPDSFTHGTSEQRYTWFKRGFDSGNPSSCNTFASAN >gi|316919239|gb|ADCU01000012.1| GENE 46 56288 - 57001 771 237 aa, chain - ## HITS:1 COG:YPO3059 KEGG:ns NR:ns ## COG: YPO3059 COG0152 # Protein_GI_number: 16123236 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Yersinia pestis # 1 237 1 237 237 434 90.0 1e-122 MQKLAELYRGKAKTVYTTENPDLLILEFRNDTSALDGQRIEQFDRKGMVNNKFNHFIMSK LEEAGIPTQMERLLSDTEVLVKKLDMVPVECVIRNRAAGSLVKRLGIEEGTPLNPPLFDL FLKNDVMHDPMVNESYCRTFGWVSDENLATMKALSYKVNDVLSKIFGDAGLILVDFKLEF GLFKGQVVLGDEFSPDGSRLWDKETLNKMDKDRYRQSLGGLIEAYEEVAHRIGVKLD >gi|316919239|gb|ADCU01000012.1| GENE 47 57166 - 58218 979 350 aa, chain - ## HITS:1 COG:YPO3061 KEGG:ns NR:ns ## COG: YPO3061 COG3317 # Protein_GI_number: 16123238 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Yersinia pestis # 1 349 1 349 352 403 65.0 1e-112 MAYSVQKSAVATVVGISLVMMLSACSTDQRYKRQVSGDEAYLDATTLSELKTPAGMILPV QNGTYDVRLATAKGEVGKALDIRPPAQPLALLNGSRGQFVNGAAIVLVESTPGASSLWTQ VTQAVQGLNYPIASRNDAGQTLTTDWISFQRGDEDVQYEGRYQISVQPQGYQTAVVVKSL GLKQGETAITEDSQTQRYAVSVLNNVVSGLDKYQTDQANARANRQVGDIDVQSGADDTGL PVLIARAPYTAVWDRLPSTLELIGMKVTDRSRPQGTISVTYKSISSSSWDDLGAKDPELK EGDYKIQVGDLDNRTSLQFLDSKGAPLTQSQNDALVSVFQAAFSKSNVSK >gi|316919239|gb|ADCU01000012.1| GENE 48 58235 - 59116 769 293 aa, chain - ## HITS:1 COG:YPO3062 KEGG:ns NR:ns ## COG: YPO3062 COG0329 # Protein_GI_number: 16123239 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Yersinia pestis # 1 293 1 293 293 489 83.0 1e-138 MFTGSIVALVTPMDDKGQVDRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHVDVV LQTLDLADGRIPVIAGAGANATAEAIALTERFNNTGVVGCLTVTPYYNKPMQEGLFQHFK AIAEHTDLPQILYNVPSRTGCDMLPETIARLAEIKNIIAVKEATGNLSRVSQIQELVNDD SFILLSGDDATALDFMQLGGQGVISVTANVAAREMAELCKLAADGDFAKARKLNQRLMAL HQQLFVEANPIPVKWACKVLGLIATDTMRLPMTPISDKARPVVEQALKHVGLL >gi|316919239|gb|ADCU01000012.1| GENE 49 59260 - 59832 380 190 aa, chain + ## HITS:1 COG:ECs3341 KEGG:ns NR:ns ## COG: ECs3341 COG2716 # Protein_GI_number: 15832595 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system regulatory protein # Organism: Escherichia coli O157:H7 # 5 188 27 210 212 307 81.0 7e-84 MPQPNQHYLVITALGADRPGIVNNITRHVSSCGCNIEDSRLAMLGEEFTFIMLLSGSWNA ITLIESTLPLKGVEMDLLIVMKRTTWHERPTMPATVWVQVEVKDSPHIIERFTDLFDSHH MNIAELVSKTQLSQDSAAPKLYIQITAHSPASQDAESIEQAFEKLCTELSAQGSINVVNY SLHEDKDGEQ >gi|316919239|gb|ADCU01000012.1| GENE 50 59832 - 60302 660 156 aa, chain + ## HITS:1 COG:YPO3064 KEGG:ns NR:ns ## COG: YPO3064 COG1225 # Protein_GI_number: 16123241 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Yersinia pestis # 1 156 2 157 157 281 84.0 3e-76 MSPLKAGSIAPKFTLLDQDGEQISLADFQGQKVLVYFYPKAMTPGCTVQACGLRDNMDEL KKMGVEVLGISTDKPEKLSRFVEKEVLNFTLLSDEDHKVAEEFGVWGEKTFMGKTYDGIH RISFLIDEEGKVQHVFDDFKTSNHHDIVLDYVKNNG >gi|316919239|gb|ADCU01000012.1| GENE 51 60370 - 61434 1217 354 aa, chain - ## HITS:1 COG:YPO3068 KEGG:ns NR:ns ## COG: YPO3068 COG0628 # Protein_GI_number: 16123245 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Yersinia pestis # 1 354 1 354 354 477 80.0 1e-134 MLDMLMQWYRRRFTDPQAVALLTILLVGFCIIYFFNGILAPLLVAIVLAYLLEWPTHKLQ LIGFSRVWAVIAVLIVFGGITLLSVFVIAPAVWQQGFNLMADMPKMVTRFYEFAATLPSR YPALVDAGIIDMVVENIRAKMAVMGESVVKLSLASLVGLLTLAIYLILVPLMVFFLLKDK EQMLNAVRRVLPRDRGLAGQVWIEMNQQITNYIRGKVLEMVVVGIATYLVFLVVDLHYAL LLAVLVGFSVLIPYIGAVLVTIPVVIVALFQWGLGADFWTLFIAYLVVQGLDGNLLVPLL FSEAVNLHPLVIILSVIIFGGLWGFWGVFFAIPLATLVKAVIHAWPDEFISEAD >gi|316919239|gb|ADCU01000012.1| GENE 52 61813 - 63297 1269 494 aa, chain + ## HITS:1 COG:YPO3069 KEGG:ns NR:ns ## COG: YPO3069 COG4783 # Protein_GI_number: 16123246 # Func_class: R General function prediction only # Function: Putative Zn-dependent protease, contains TPR repeats # Organism: Yersinia pestis # 29 491 26 485 486 666 75.0 0 MTSRFKTSVIATIVAGLLLTGSMPSKADPSDDQLPDIGTTAGNTLSINQELAMGDFYVRQ LRASTPLINDPLLMEYINGLGARLVAHANSVRTPFHFYLVRNDEINAFAFFGGNVVLHSA LFRYTDNESQLASVMAHEISHVTQRHLARAMEEQQRTAPLTWVGALGSILLAMASPQAGM AALSGTLAGSQQNMISFTQQNEQEADRIGIQVLQRSGFDPQAMPNFLQKLSDQLRYSSKP PEILLTHPLPDSRLSDTRNRANQMPPHPVQSSQDYLLAKVRALGMYSGGQDGNTFLTEDV LKAMENGNVREQTAARYGRAILFSQTNKYDDARKMLQPLLDSQPDNIWFIDLMTDIDLEQ KKAPTAIARLEKALAKNRTEPVLQINLANAYVEGNQAAKASRILYRYTFEHPNDPNGWDL LAQASTAQGLRDEELSARAESLALLGQLDQAIGLLSNASALMPVGSLKQARYDARIDQLR QLQQRFKQYQRGGR >gi|316919239|gb|ADCU01000012.1| GENE 53 63307 - 63663 358 118 aa, chain + ## HITS:1 COG:yfgD KEGG:ns NR:ns ## COG: yfgD COG1393 # Protein_GI_number: 16130420 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli K12 # 1 118 1 118 119 161 71.0 3e-40 MTQRVTIYHNPRCSKSRETLTLLQEQGIEPQIIQYLDTPPDAATLKTLLKDLGFSSARQL MRHKEDIYKELNLADESLTEDQLIDAMVNHPKLIERPIVVKGKKARIGRPPEQILEIL >gi|316919239|gb|ADCU01000012.1| GENE 54 63677 - 64270 335 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227991484|ref|ZP_04038550.1| acetyltransferase, ribosomal protein N-acetylase [Meiothermus ruber DSM 1279] # 1 186 5 202 212 133 38 2e-30 MEQPVLKGKLVELHPIQVEHRQPIIDAASDGQLWEMTLTVIPSPQTIDQYLNHAFENRDN GSHIPFVIIDAASRKVVGCTRFWKIDRANRKLEIGHTWLSQSFQRSGINTEAKYLLLTYA FEVMECVRVQFTTDENNTRSRAAILRIGAQQEGIIRHERIMPDGRKRNSVRFSIIDDEWK VIKAGLEGKMAGKLGVS Prediction of potential genes in microbial genomes Time: Wed May 18 15:11:15 2011 Seq name: gi|316918893|gb|ADCU01000013.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.13, whole genome shotgun sequence Length of sequence - 381678 bp Number of predicted genes - 358, with homology - 314 Number of transcription units - 196, operones - 76 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 266 - 325 7.3 1 1 Tu 1 . + CDS 375 - 1244 431 ## SPAB_01591 hypothetical protein + Term 1299 - 1332 4.1 2 2 Tu 1 . + CDS 1362 - 3410 940 ## EFER_1570 putative invasin-like protein; putative exported protein + Prom 3501 - 3560 4.4 3 3 Tu 1 . + CDS 3650 - 4966 241 ## + Term 4994 - 5044 8.1 - Term 4982 - 5029 -0.6 4 4 Op 1 8/0.035 - CDS 5043 - 5858 179 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 5890 - 5949 9.6 5 4 Op 2 . - CDS 5957 - 6793 79 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 7021 - 7080 5.1 + Prom 6732 - 6791 12.1 6 5 Tu 1 . + CDS 6890 - 7156 57 ## 7 6 Tu 1 . + CDS 7557 - 8105 -89 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 8125 - 8160 4.1 8 7 Op 1 41/0.000 - CDS 8210 - 9022 292 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Term 9031 - 9076 4.1 9 7 Op 2 3/0.351 - CDS 9089 - 10762 1347 ## COG0581 ABC-type phosphate transport system, permease component 10 7 Op 3 . - CDS 10759 - 12963 1378 ## COG4590 ABC-type uncharacterized transport system, permease component + Prom 12954 - 13013 3.2 11 8 Op 1 11/0.018 + CDS 13132 - 15198 1611 ## COG0855 Polyphosphate kinase 12 8 Op 2 . + CDS 15223 - 16746 1404 ## COG0248 Exopolyphosphatase + Term 16817 - 16850 4.1 + Prom 17010 - 17069 9.1 13 9 Op 1 . + CDS 17236 - 17439 126 ## 14 9 Op 2 . + CDS 17516 - 17938 315 ## ROD_08231 hypothetical protein 15 10 Op 1 9/0.018 - CDS 18096 - 19052 862 ## COG0226 ABC-type phosphate transport system, periplasmic component 16 10 Op 2 40/0.000 - CDS 19052 - 20401 913 ## COG0642 Signal transduction histidine kinase - Term 20448 - 20474 -1.0 17 10 Op 3 . - CDS 20511 - 21200 653 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 21266 - 21325 6.8 + Prom 21235 - 21294 5.4 18 11 Op 1 28/0.000 + CDS 21419 - 22678 1029 ## COG0420 DNA repair exonuclease 19 11 Op 2 . + CDS 22675 - 26361 3246 ## COG0419 ATPase involved in DNA repair + Term 26500 - 26540 3.0 20 12 Tu 1 . - CDS 26563 - 26919 272 ## COG3326 Predicted membrane protein - Prom 26949 - 27008 4.3 + Prom 26886 - 26945 4.7 21 13 Op 1 7/0.035 + CDS 27181 - 27504 433 ## COG1445 Phosphotransferase system fructose-specific component IIB 22 13 Op 2 3/0.351 + CDS 27553 - 28809 1165 ## COG1299 Phosphotransferase system, fructose-specific IIC component 23 13 Op 3 3/0.351 + CDS 28907 - 30016 760 ## COG0006 Xaa-Pro aminopeptidase 24 13 Op 4 3/0.351 + CDS 30013 - 31056 411 ## COG1363 Cellulase M and related proteins 25 13 Op 5 . + CDS 31084 - 33579 1776 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 33651 - 33697 10.7 - Term 33333 - 33377 -0.9 26 14 Op 1 . - CDS 33576 - 34457 273 ## COG2207 AraC-type DNA-binding domain-containing proteins 27 14 Op 2 . - CDS 34514 - 34996 380 ## COG3449 DNA gyrase inhibitor - Prom 35017 - 35076 3.9 28 15 Tu 1 . - CDS 35161 - 35562 220 ## Smlt3586 hypothetical protein - Prom 35616 - 35675 1.9 + Prom 35846 - 35905 2.8 29 16 Tu 1 . + CDS 35996 - 37321 1167 ## COG0477 Permeases of the major facilitator superfamily + Term 37355 - 37394 8.4 - Term 37339 - 37382 2.4 30 17 Tu 1 . - CDS 37390 - 38298 290 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 - Prom 38418 - 38477 3.5 + Prom 38360 - 38419 5.3 31 18 Tu 1 . + CDS 38596 - 39507 1022 ## COG2974 DNA recombination-dependent growth factor C + Term 39524 - 39559 5.0 - Term 39512 - 39547 5.0 32 19 Op 1 . - CDS 39608 - 39895 312 ## COG3123 Uncharacterized protein conserved in bacteria - Prom 39922 - 39981 2.0 33 19 Op 2 . - CDS 40023 - 40976 1076 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 41030 - 41089 5.0 + Prom 41226 - 41285 6.6 34 20 Op 1 27/0.000 + CDS 41377 - 42666 1259 ## COG0845 Membrane-fusion protein 35 20 Op 2 10/0.018 + CDS 42666 - 45815 2926 ## COG0841 Cation/multidrug efflux pump 36 20 Op 3 5/0.175 + CDS 45812 - 48910 2444 ## COG0841 Cation/multidrug efflux pump 37 20 Op 4 10/0.018 + CDS 49008 - 50432 1285 ## COG0477 Permeases of the major facilitator superfamily 38 20 Op 5 40/0.000 + CDS 50429 - 51811 995 ## COG0642 Signal transduction histidine kinase 39 20 Op 6 2/0.456 + CDS 51817 - 52542 586 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 52554 - 52592 6.4 + Prom 52578 - 52637 4.2 40 21 Tu 1 . + CDS 52716 - 53057 326 ## COG3422 Uncharacterized conserved protein + Term 53176 - 53205 -0.9 + Prom 53278 - 53337 3.2 41 22 Tu 1 . + CDS 53400 - 54773 1522 ## COG0826 Collagenase and related proteases + Term 54785 - 54823 -0.7 + Prom 55274 - 55333 6.1 42 23 Tu 1 . + CDS 55423 - 56322 779 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase + Term 56347 - 56383 9.6 + Prom 56415 - 56474 2.2 43 24 Op 1 2/0.456 + CDS 56543 - 57757 1079 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 44 24 Op 2 7/0.035 + CDS 57774 - 58793 775 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 45 24 Op 3 . + CDS 58890 - 60173 993 ## COG0477 Permeases of the major facilitator superfamily + Prom 60223 - 60282 2.9 46 25 Op 1 1/0.579 + CDS 60390 - 61955 1034 ## COG2211 Na+/melibiose symporter and related transporters 47 25 Op 2 . + CDS 61967 - 63436 1334 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 48 25 Op 3 1/0.579 + CDS 63447 - 64472 884 ## COG2055 Malate/L-lactate dehydrogenases + Prom 64535 - 64594 1.6 49 26 Tu 1 . + CDS 64628 - 65335 550 ## COG1802 Transcriptional regulators - Term 65259 - 65307 -0.3 50 27 Tu 1 . - CDS 65372 - 66346 749 ## COG0583 Transcriptional regulator - Prom 66442 - 66501 5.4 51 28 Op 1 12/0.018 - CDS 66572 - 67249 615 ## COG2181 Nitrate reductase gamma subunit 52 28 Op 2 12/0.018 - CDS 67246 - 67968 731 ## COG2180 Nitrate reductase delta subunit 53 28 Op 3 13/0.018 - CDS 67965 - 69524 1190 ## COG1140 Nitrate reductase beta subunit 54 28 Op 4 . - CDS 69521 - 73297 3485 ## COG5013 Nitrate reductase alpha subunit - Prom 73504 - 73563 9.4 + Prom 73491 - 73550 7.8 55 29 Tu 1 . + CDS 73770 - 74222 268 ## - Term 74373 - 74409 2.0 56 30 Tu 1 . - CDS 74537 - 75952 1150 ## COG2223 Nitrate/nitrite transporter - Prom 76084 - 76143 2.7 + Prom 76043 - 76102 3.7 57 31 Op 1 8/0.035 + CDS 76280 - 78058 1347 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific 58 31 Op 2 . + CDS 78090 - 78752 735 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 78868 - 78895 0.1 - Term 78754 - 78808 12.5 59 32 Tu 1 . - CDS 78819 - 79454 542 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 79582 - 79641 7.2 - Term 79618 - 79663 12.7 60 33 Tu 1 . - CDS 79689 - 80159 412 ## Spro_3576 inhibitor of vertebrate lysozyme - Prom 80194 - 80253 2.4 + Prom 80125 - 80184 5.6 61 34 Tu 1 . + CDS 80347 - 81201 626 ## YPDSF_2208 hypothetical protein - Term 81206 - 81258 3.0 62 35 Tu 1 . - CDS 81270 - 82148 691 ## COG3568 Metal-dependent hydrolase - Prom 82306 - 82365 3.4 63 36 Op 1 12/0.018 - CDS 82367 - 83167 719 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 64 36 Op 2 . - CDS 83164 - 83823 375 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family - Prom 83885 - 83944 2.6 - Term 84201 - 84235 1.2 65 37 Op 1 6/0.035 - CDS 84250 - 84957 656 ## COG0593 ATPase involved in DNA replication initiation - Prom 84978 - 85037 3.1 - Term 84971 - 85011 7.3 66 37 Op 2 5/0.175 - CDS 85039 - 86331 1369 ## COG2233 Xanthine/uracil permeases - Prom 86353 - 86412 3.3 - Term 86510 - 86544 3.5 67 38 Tu 1 . - CDS 86550 - 87176 670 ## COG0035 Uracil phosphoribosyltransferase - Prom 87215 - 87274 7.5 + Prom 87207 - 87266 4.8 68 39 Op 1 21/0.000 + CDS 87464 - 88519 1240 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase 69 39 Op 2 1/0.579 + CDS 88532 - 89170 641 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN + Term 89201 - 89234 2.0 + Prom 89220 - 89279 6.9 70 40 Tu 1 . + CDS 89337 - 89894 458 ## PROTEIN SUPPORTED gi|116512426|ref|YP_809642.1| spermidine acetyltransferase + Term 89915 - 89952 9.1 - Term 89845 - 89877 3.1 71 41 Tu 1 . - CDS 89962 - 91707 1385 ## COG0277 FAD/FMN-containing dehydrogenases - Prom 91770 - 91829 10.4 - Term 91811 - 91843 1.0 72 42 Op 1 11/0.018 - CDS 91863 - 92594 823 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 73 42 Op 2 11/0.018 - CDS 92634 - 94364 1515 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) 74 42 Op 3 . - CDS 94364 - 96166 1971 ## COG0369 Sulfite reductase, alpha subunit (flavoprotein) 75 43 Tu 1 . + CDS 96723 - 97082 398 ## COG0720 6-pyruvoyl-tetrahydropterin synthase + Term 97095 - 97130 5.4 76 44 Tu 1 . - CDS 97148 - 97462 284 ## COG4575 Uncharacterized conserved protein - Prom 97537 - 97596 2.8 + Prom 97614 - 97673 3.7 77 45 Tu 1 . + CDS 97754 - 98968 1084 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 99061 - 99112 6.3 78 46 Tu 1 . - CDS 99662 - 100792 817 ## COG0477 Permeases of the major facilitator superfamily - Prom 100815 - 100874 4.1 + Prom 100743 - 100802 3.7 79 47 Op 1 . + CDS 100841 - 101008 104 ## + Prom 101014 - 101073 3.1 80 47 Op 2 . + CDS 101101 - 101262 123 ## 81 48 Op 1 . - CDS 101285 - 102085 506 ## COG2134 CDP-diacylglycerol pyrophosphatase 82 48 Op 2 . - CDS 102087 - 102758 230 ## PROTEIN SUPPORTED gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 - Prom 102831 - 102890 2.1 + Prom 102938 - 102997 4.2 83 49 Op 1 7/0.035 + CDS 103079 - 104275 993 ## COG1228 Imidazolonepropionase and related amidohydrolases 84 49 Op 2 1/0.579 + CDS 104272 - 105225 733 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 85 49 Op 3 1/0.579 + CDS 105238 - 105972 517 ## COG2188 Transcriptional regulators 86 49 Op 4 . + CDS 105969 - 106568 267 ## COG3758 Uncharacterized protein conserved in bacteria + Term 106576 - 106612 -0.1 + Prom 106605 - 106664 5.8 87 50 Op 1 26/0.000 + CDS 106706 - 107623 1042 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 88 50 Op 2 . + CDS 107623 - 108081 324 ## COG1585 Membrane protein implicated in regulation of membrane protease activity 89 51 Tu 1 . - CDS 108200 - 108604 355 ## COG0789 Predicted transcriptional regulators - Prom 108720 - 108779 2.9 + Prom 108640 - 108699 1.6 90 52 Tu 1 . + CDS 108730 - 111489 2772 ## COG2217 Cation transport ATPase + Term 111512 - 111555 3.7 + Prom 111511 - 111570 2.5 91 53 Tu 1 . + CDS 111597 - 112409 728 ## COG3735 Uncharacterized protein conserved in bacteria + Term 112430 - 112463 -0.9 + Prom 112585 - 112644 5.0 92 54 Tu 1 . + CDS 112740 - 113219 478 ## COG2606 Uncharacterized conserved protein - Term 113199 - 113251 6.4 93 55 Tu 1 . - CDS 113261 - 113980 628 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 114075 - 114134 6.0 - Term 114113 - 114153 8.2 94 56 Tu 1 . - CDS 114194 - 114406 262 ## COG1278 Cold shock proteins - Prom 114435 - 114494 7.1 95 57 Tu 1 . - CDS 114766 - 116418 1643 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 116460 - 116519 4.8 + Prom 116463 - 116522 4.5 96 58 Tu 1 . + CDS 116744 - 117967 1130 ## COG0477 Permeases of the major facilitator superfamily + Term 117977 - 118016 2.8 + Prom 118368 - 118427 4.9 97 59 Tu 1 . + CDS 118469 - 120166 502 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 - Term 120759 - 120798 -0.9 98 60 Tu 1 . - CDS 120808 - 122109 1285 ## COG0524 Sugar kinases, ribokinase family - Prom 122138 - 122197 4.2 - Term 122135 - 122175 -0.7 99 61 Tu 1 . - CDS 122212 - 123186 676 ## COG0276 Protoheme ferro-lyase (ferrochelatase) - Prom 123267 - 123326 5.0 - Term 123280 - 123308 2.1 100 62 Tu 1 . - CDS 123328 - 123972 934 ## COG0563 Adenylate kinase and related kinases - Prom 123993 - 124052 5.3 - Term 124141 - 124178 2.1 101 63 Op 1 . - CDS 124198 - 125337 865 ## COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins 102 63 Op 2 . - CDS 125400 - 126971 1081 ## COG2211 Na+/melibiose symporter and related transporters - Prom 127164 - 127223 5.1 103 64 Op 1 . + CDS 127551 - 128453 722 ## COG2421 Predicted acetamidase/formamidase 104 64 Op 2 . + CDS 128462 - 129805 1235 ## COG0531 Amino acid transporters + Term 129964 - 129998 3.1 105 65 Tu 1 . - CDS 130126 - 131994 2072 ## COG0326 Molecular chaperone, HSP90 family - Prom 132028 - 132087 4.3 - Term 132095 - 132154 13.0 106 66 Op 1 23/0.000 - CDS 132170 - 132775 538 ## COG0353 Recombinational DNA repair protein (RecF pathway) 107 66 Op 2 30/0.000 - CDS 132775 - 133104 231 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 108 66 Op 3 . - CDS 133155 - 135158 1656 ## COG2812 DNA polymerase III, gamma/tau subunits + Prom 135139 - 135198 3.0 109 67 Tu 1 . + CDS 135302 - 135577 117 ## - Term 135471 - 135501 2.1 110 68 Tu 1 . - CDS 135540 - 136091 715 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 111 69 Tu 1 . - CDS 136279 - 136773 252 ## COG2832 Uncharacterized protein conserved in bacteria - Prom 136806 - 136865 2.0 + Prom 136645 - 136704 2.1 112 70 Tu 1 . + CDS 136789 - 137331 480 ## COG3923 Primosomal replication protein N'' + Prom 137341 - 137400 4.0 113 71 Op 1 . + CDS 137431 - 137679 369 ## COG2261 Predicted membrane protein 114 71 Op 2 . + CDS 137689 - 137868 191 ## + Term 137887 - 137919 1.6 115 72 Tu 1 . - CDS 137924 - 141289 2827 ## COG3264 Small-conductance mechanosensitive channel - Prom 141355 - 141414 4.9 - Term 141396 - 141444 2.4 116 73 Op 1 1/0.579 - CDS 141467 - 141820 369 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction 117 73 Op 2 . - CDS 141820 - 142524 357 ## COG1309 Transcriptional regulator - Prom 142633 - 142692 4.6 + Prom 142528 - 142587 6.1 118 74 Op 1 27/0.000 + CDS 142664 - 143854 1226 ## COG0845 Membrane-fusion protein 119 74 Op 2 1/0.579 + CDS 143900 - 147052 3019 ## COG0841 Cation/multidrug efflux pump + Term 147071 - 147098 1.5 + Prom 147124 - 147183 6.1 120 75 Op 1 . + CDS 147213 - 147485 355 ## PROTEIN SUPPORTED gi|51595332|ref|YP_069523.1| 50S ribosomal protein L31 type B 121 75 Op 2 . + CDS 147485 - 147625 222 ## PROTEIN SUPPORTED gi|90019301|gb|ABD84301.1| putative ribosomal protein L36-like 122 76 Op 1 . + CDS 148142 - 148516 253 ## ETAE_1009 hypothetical protein 123 76 Op 2 . + CDS 148530 - 148733 309 ## ETAE_1008 hemolysin expression modulating family protein + Term 148802 - 148835 -0.1 - 5S_RRNA 149395 - 149507 96.0 # AE009952 [D:1179164..1179277] # 4.5S RNA # Yersinia pestis KIM # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia. + Prom 149596 - 149655 4.2 124 77 Tu 1 . + CDS 149690 - 150022 218 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase + Term 150028 - 150057 1.2 - Term 150016 - 150045 0.4 125 78 Tu 1 . - CDS 150074 - 150592 493 ## COG3126 Uncharacterized protein conserved in bacteria - Prom 150626 - 150685 5.4 + Prom 150700 - 150759 5.3 126 79 Tu 1 . + CDS 150905 - 151765 726 ## COG1946 Acyl-CoA thioesterase + Term 151783 - 151818 4.0 - Term 151764 - 151812 7.1 127 80 Op 1 24/0.000 - CDS 151829 - 153118 1269 ## COG0004 Ammonia permease 128 80 Op 2 4/0.281 - CDS 153152 - 153490 452 ## COG0347 Nitrogen regulatory protein PII - Term 153771 - 153811 6.4 129 81 Op 1 35/0.000 - CDS 153836 - 155614 203 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 130 81 Op 2 3/0.351 - CDS 155607 - 157379 174 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 157560 - 157619 3.5 131 82 Op 1 . - CDS 157622 - 158083 381 ## COG1522 Transcriptional regulators 132 82 Op 2 . - CDS 158143 - 158280 57 ## - Prom 158378 - 158437 2.5 + Prom 158031 - 158090 2.1 133 83 Tu 1 . + CDS 158209 - 159249 850 ## COG0031 Cysteine synthase + Term 159322 - 159360 4.1 - Term 159262 - 159306 8.2 134 84 Tu 1 . - CDS 159327 - 160148 489 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 160181 - 160240 3.4 + Prom 160173 - 160232 2.2 135 85 Tu 1 5/0.175 + CDS 160252 - 161952 924 ## COG4533 ABC-type uncharacterized transport system, periplasmic component + Term 162025 - 162059 4.0 136 86 Tu 1 . + CDS 162077 - 162763 634 ## COG0603 Predicted PP-loop superfamily ATPase 137 87 Tu 1 . - CDS 162815 - 163225 380 ## COG0824 Predicted thioesterase 138 88 Tu 1 . - CDS 163382 - 163762 344 ## COG1555 DNA uptake protein and related DNA-binding proteins - Prom 163823 - 163882 3.7 - Term 163837 - 163864 1.5 139 89 Tu 1 . - CDS 163903 - 165786 2222 ## COG0760 Parvulin-like peptidyl-prolyl isomerase - Prom 165993 - 166052 4.6 - Term 166063 - 166096 -0.9 140 90 Op 1 16/0.000 - CDS 166105 - 166377 391 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 166507 - 166566 3.7 - Term 166520 - 166563 2.2 141 90 Op 2 . - CDS 166596 - 168950 2489 ## COG0466 ATP-dependent Lon protease, bacterial type - Prom 169030 - 169089 5.3 + Prom 168670 - 168729 4.0 142 91 Tu 1 . + CDS 168925 - 169140 78 ## + Term 169287 - 169340 -0.0 - Term 169078 - 169108 2.0 143 92 Op 1 24/0.000 - CDS 169141 - 170412 1590 ## COG1219 ATP-dependent protease Clp, ATPase subunit - Prom 170568 - 170627 3.2 144 92 Op 2 29/0.000 - CDS 170696 - 171316 524 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 171352 - 171411 3.9 - Term 171469 - 171500 3.4 145 92 Op 3 2/0.456 - CDS 171541 - 172845 1723 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) - Prom 173052 - 173111 5.4 - Term 173273 - 173313 -0.9 146 93 Tu 1 . - CDS 173358 - 173672 339 ## COG0271 Stress-induced morphogen (activity unknown) - Prom 173782 - 173841 4.7 - Term 173766 - 173823 0.1 147 94 Op 1 . - CDS 173884 - 174999 498 ## ECL_00707 hypothetical protein 148 94 Op 2 . - CDS 175064 - 176623 1164 ## COG2211 Na+/melibiose symporter and related transporters - Prom 176645 - 176704 5.1 149 95 Op 1 9/0.018 - CDS 176726 - 177748 581 ## COG0673 Predicted dehydrogenases and related proteins 150 95 Op 2 9/0.018 - CDS 177761 - 178834 1019 ## COG0673 Predicted dehydrogenases and related proteins 151 95 Op 3 . - CDS 178831 - 180024 795 ## COG0673 Predicted dehydrogenases and related proteins - Prom 180206 - 180265 7.3 + Prom 180157 - 180216 8.6 152 96 Tu 1 . + CDS 180368 - 181438 516 ## COG1609 Transcriptional regulators + Prom 181496 - 181555 4.5 153 97 Op 1 1/0.579 + CDS 181637 - 182221 545 ## COG3056 Uncharacterized lipoprotein 154 97 Op 2 5/0.175 + CDS 182281 - 183762 1328 ## COG0477 Permeases of the major facilitator superfamily + Term 183763 - 183803 3.1 + Prom 184295 - 184354 6.1 155 98 Op 1 25/0.000 + CDS 184394 - 185323 654 ## COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 156 98 Op 2 20/0.000 + CDS 185327 - 187318 1629 ## COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 157 98 Op 3 16/0.000 + CDS 187308 - 187928 602 ## COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 158 98 Op 4 7/0.035 + CDS 187928 - 188278 248 ## COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 159 98 Op 5 2/0.456 + CDS 188292 - 189182 856 ## COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) + Term 189241 - 189282 4.7 + Prom 189473 - 189532 4.0 160 99 Tu 1 . + CDS 189556 - 190923 1049 ## COG0477 Permeases of the major facilitator superfamily - Term 191404 - 191459 6.5 161 100 Tu 1 . - CDS 191621 - 192112 600 ## COG1666 Uncharacterized protein conserved in bacteria - Prom 192136 - 192195 3.3 + Prom 192186 - 192245 5.5 162 101 Op 1 4/0.281 + CDS 192300 - 193211 532 ## COG1893 Ketopantoate reductase 163 101 Op 2 . + CDS 193174 - 193764 663 ## COG0693 Putative intracellular protease/amidase + Term 193833 - 193860 -0.4 - Term 193691 - 193723 2.3 164 102 Tu 1 . - CDS 193767 - 194183 260 ## S3732 putative peptidoglycan peptidase - Prom 194364 - 194423 1.8 165 103 Tu 1 . - CDS 194425 - 195873 1381 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase - Prom 196091 - 196150 4.1 + Prom 195999 - 196058 3.5 166 104 Op 1 22/0.000 + CDS 196121 - 196378 314 ## COG1722 Exonuclease VII small subunit 167 104 Op 2 13/0.018 + CDS 196381 - 197286 874 ## COG0142 Geranylgeranyl pyrophosphate synthase + Prom 197379 - 197438 2.8 168 105 Tu 1 . + CDS 197472 - 199337 1629 ## COG1154 Deoxyxylulose-5-phosphate synthase + Term 199355 - 199390 6.0 - Term 199343 - 199378 6.0 169 106 Tu 1 . - CDS 199423 - 199941 501 ## COG3157 Hemolysin-coregulated protein (uncharacterized) - Prom 200076 - 200135 5.0 170 107 Tu 1 . - CDS 200255 - 201526 440 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 201746 - 201805 8.0 - Term 201652 - 201689 6.2 171 108 Op 1 . - CDS 201891 - 202964 580 ## gi|90408249|ref|ZP_01216415.1| hypothetical protein PCNPT3_09868 172 108 Op 2 . - CDS 202980 - 203120 69 ## - Prom 203292 - 203351 7.3 - Term 203348 - 203383 5.8 173 109 Op 1 . - CDS 203403 - 204476 586 ## gi|90408249|ref|ZP_01216415.1| hypothetical protein PCNPT3_09868 174 109 Op 2 . - CDS 204492 - 206906 1569 ## gi|298507199|gb|ADI85922.1| hypothetical protein KN400_3110 175 109 Op 3 . - CDS 206903 - 207835 669 ## gi|90408262|ref|ZP_01216428.1| hypothetical protein PCNPT3_09933 176 109 Op 4 . - CDS 207843 - 208121 285 ## AZL_a05160 hypothetical protein 177 109 Op 5 . - CDS 208132 - 210186 1729 ## COG3501 Uncharacterized protein conserved in bacteria 178 109 Op 6 . - CDS 210198 - 210608 348 ## 179 109 Op 7 5/0.175 - CDS 210663 - 212027 865 ## COG3515 Uncharacterized protein conserved in bacteria 180 109 Op 8 5/0.175 - CDS 212079 - 215777 2354 ## COG3523 Uncharacterized protein conserved in bacteria 181 109 Op 9 . - CDS 215784 - 217229 689 ## COG3515 Uncharacterized protein conserved in bacteria 182 109 Op 10 . - CDS 217281 - 217961 295 ## SeAg_B1101 type VI secretion-associated protein, family 183 109 Op 11 1/0.579 - CDS 217958 - 219478 360 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain 184 109 Op 12 4/0.281 - CDS 219478 - 222078 1185 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 185 109 Op 13 8/0.035 - CDS 222153 - 222977 542 ## COG3455 Uncharacterized protein conserved in bacteria 186 109 Op 14 8/0.035 - CDS 222983 - 224323 779 ## COG3522 Uncharacterized protein conserved in bacteria 187 109 Op 15 6/0.035 - CDS 224326 - 224835 485 ## COG3521 Uncharacterized protein conserved in bacteria 188 109 Op 16 6/0.035 - CDS 224832 - 226121 516 ## COG3456 Uncharacterized conserved protein, contains FHA domain 189 109 Op 17 9/0.018 - CDS 226144 - 227106 285 ## COG3520 Uncharacterized protein conserved in bacteria 190 109 Op 18 8/0.035 - CDS 227103 - 228878 658 ## COG3519 Uncharacterized protein conserved in bacteria 191 109 Op 19 5/0.175 - CDS 228891 - 229319 168 ## COG3518 Uncharacterized protein conserved in bacteria 192 109 Op 20 . - CDS 229323 - 230252 616 ## COG3517 Uncharacterized protein conserved in bacteria 193 109 Op 21 6/0.035 - CDS 230222 - 230806 379 ## COG3517 Uncharacterized protein conserved in bacteria 194 109 Op 22 . - CDS 230863 - 231372 361 ## COG3516 Uncharacterized protein conserved in bacteria - Prom 231532 - 231591 7.3 + Prom 231437 - 231496 9.2 195 110 Tu 1 . + CDS 231739 - 232713 822 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 196 111 Op 1 12/0.018 - CDS 232805 - 233326 354 ## COG1267 Phosphatidylglycerophosphatase A and related proteins 197 111 Op 2 11/0.018 - CDS 233313 - 234290 945 ## COG0611 Thiamine monophosphate kinase - Prom 234332 - 234391 5.7 - Term 234344 - 234371 1.5 198 112 Op 1 17/0.000 - CDS 234428 - 234847 496 ## COG0781 Transcription termination factor 199 112 Op 2 6/0.035 - CDS 234868 - 235338 563 ## COG0054 Riboflavin synthase beta-chain - Prom 235398 - 235457 1.8 200 113 Op 1 14/0.018 - CDS 235511 - 236632 899 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 201 113 Op 2 . - CDS 236674 - 237123 397 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains - Prom 237147 - 237206 4.3 + Prom 237295 - 237354 3.2 202 114 Tu 1 . + CDS 237439 - 237972 339 ## Dd1591_3093 hypothetical protein + Term 238004 - 238031 1.5 - Term 237987 - 238026 4.1 203 115 Op 1 31/0.000 - CDS 238056 - 239027 983 ## COG0341 Preprotein translocase subunit SecF 204 115 Op 2 25/0.000 - CDS 239038 - 240861 1776 ## COG0342 Preprotein translocase subunit SecD 205 115 Op 3 15/0.000 - CDS 240922 - 241254 401 ## COG1862 Preprotein translocase subunit YajC - Prom 241309 - 241368 2.3 - Term 241376 - 241414 3.6 206 115 Op 4 . - CDS 241421 - 242548 909 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase - Prom 242594 - 242653 4.5 - Term 242706 - 242751 4.1 207 116 Tu 1 . - CDS 242760 - 243137 216 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 243163 - 243222 4.0 208 117 Tu 1 . - CDS 243453 - 244070 133 ## Kvar_2586 transcriptional regulator, LuxR family - Prom 244139 - 244198 2.7 209 118 Op 1 . - CDS 244226 - 245479 776 ## PMI1909 hypothetical protein - Term 245489 - 245514 -0.5 210 118 Op 2 . - CDS 245525 - 246187 361 ## 211 118 Op 3 . - CDS 246189 - 246488 107 ## 212 118 Op 4 5/0.175 - CDS 246488 - 249880 1624 ## COG4733 Phage-related protein, tail component 213 118 Op 5 6/0.035 - CDS 249924 - 250565 477 ## COG4723 Phage-related protein, tail component 214 118 Op 6 6/0.035 - CDS 250565 - 251296 272 ## COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily 215 118 Op 7 5/0.175 - CDS 251301 - 252056 265 ## COG4672 Phage-related protein - Term 252063 - 252092 -0.2 216 118 Op 8 . - CDS 252120 - 252461 129 ## COG4718 Phage-related protein - Term 252475 - 252502 -0.1 217 118 Op 9 . - CDS 252526 - 252894 151 ## 218 118 Op 10 . - CDS 252924 - 253217 176 ## YPK_3118 phage-related membrane protein - Term 253224 - 253256 1.0 219 118 Op 11 . - CDS 253275 - 256310 1777 ## COG5281 Phage-related minor tail protein - Prom 256333 - 256392 4.7 220 119 Tu 1 . - CDS 256634 - 257179 419 ## COG3646 Uncharacterized phage-encoded protein - Prom 257367 - 257426 4.7 221 120 Tu 1 . - CDS 257690 - 258043 376 ## YE2315 hypothetical protein - Prom 258101 - 258160 1.9 - Term 258079 - 258110 1.7 222 121 Op 1 . - CDS 258176 - 258826 490 ## COG5492 Bacterial surface proteins containing Ig-like domains - Term 258846 - 258872 0.1 223 121 Op 2 . - CDS 258914 - 259375 389 ## 224 121 Op 3 . - CDS 259383 - 259796 229 ## YE2317 hypothetical protein 225 121 Op 4 . - CDS 259793 - 260386 398 ## YE2318 hypothetical protein 226 121 Op 5 . - CDS 260388 - 260732 328 ## YPO2113 hypothetical protein 227 121 Op 6 . - CDS 260738 - 261253 290 ## 228 121 Op 7 . - CDS 261253 - 261741 212 ## y2204 hypothetical protein - Prom 261774 - 261833 3.8 229 122 Op 1 . - CDS 262072 - 263031 989 ## COG5492 Bacterial surface proteins containing Ig-like domains 230 122 Op 2 . - CDS 263034 - 263813 545 ## YPDSF_1020 hypothetical protein - Prom 263842 - 263901 3.9 - Term 263880 - 263914 3.5 231 123 Op 1 . - CDS 263927 - 264268 236 ## 232 123 Op 2 . - CDS 264303 - 265415 627 ## YE2323 hypothetical protein 233 123 Op 3 . - CDS 265448 - 266839 627 ## YE2324 hypothetical protein 234 123 Op 4 . - CDS 266839 - 268401 683 ## YE2325 putative phage terminase large subunit 235 123 Op 5 . - CDS 268398 - 268979 432 ## COG3728 Phage terminase, small subunit - Prom 269140 - 269199 3.8 + Prom 268929 - 268988 1.9 236 124 Tu 1 . + CDS 269008 - 269238 183 ## + Term 269253 - 269297 4.1 237 125 Op 1 . - CDS 269282 - 269476 273 ## 238 125 Op 2 . - CDS 269479 - 269673 213 ## gi|212711509|ref|ZP_03319637.1| hypothetical protein PROVALCAL_02582 - Prom 269788 - 269847 1.6 239 126 Op 1 . - CDS 270120 - 270305 144 ## 240 126 Op 2 . - CDS 270292 - 270696 105 ## gi|294636151|ref|ZP_06714572.1| conserved hypothetical protein 241 126 Op 3 . - CDS 270686 - 270961 193 ## SeSA_A0669 hypothetical protein 242 127 Op 1 . - CDS 271702 - 271980 305 ## YPTB1807 hypothetical protein 243 127 Op 2 . - CDS 271994 - 272455 357 ## Ent638_2608 bacteriophage lysis protein 244 127 Op 3 . - CDS 272452 - 272928 325 ## COG4678 Muramidase (phage lambda lysozyme) 245 127 Op 4 . - CDS 272915 - 273226 263 ## ECS88_2894 putative holin protein - TRNA 273540 - 273616 69.4 # Arg TCT 0 0 - Term 273900 - 273945 3.2 246 128 Tu 1 . - CDS 274053 - 274823 101 ## Ctu_11610 antitermination protein Q homolog from lambdoid prophage Qin - Prom 275036 - 275095 1.6 247 129 Tu 1 . - CDS 275178 - 275540 154 ## COG4570 Holliday junction resolvase 248 130 Tu 1 . - CDS 275984 - 276295 244 ## Ent638_0788 NinB family protein 249 131 Op 1 . - CDS 276436 - 276633 170 ## gi|261245575|emb|CBG23370.1| predicted prophage protein 250 131 Op 2 . - CDS 276693 - 277046 147 ## 251 131 Op 3 . - CDS 277048 - 277317 245 ## 252 131 Op 4 . - CDS 277304 - 277546 111 ## Ctu_11340 hypothetical protein 253 131 Op 5 . - CDS 277549 - 278886 764 ## COG0305 Replicative DNA helicase 254 131 Op 6 . - CDS 278886 - 279884 348 ## Ctu_11440 DNA replication protein GP18 255 131 Op 7 . - CDS 279934 - 280083 89 ## 256 131 Op 8 . - CDS 280105 - 280446 147 ## ESA_01613 hypothetical protein 257 132 Tu 1 . - CDS 280551 - 280787 128 ## Ent638_1012 regulator protein, putative - Prom 280815 - 280874 6.2 + Prom 280774 - 280833 2.7 258 133 Tu 1 . + CDS 280871 - 281638 243 ## COG2932 Predicted transcriptional regulator + Term 281666 - 281698 1.1 + Prom 281809 - 281868 3.0 259 134 Op 1 . + CDS 281920 - 282261 277 ## Ent638_1010 hypothetical protein 260 134 Op 2 . + CDS 282291 - 282413 95 ## + Term 282434 - 282463 1.1 - Term 282365 - 282399 1.2 261 135 Tu 1 . - CDS 282464 - 282655 157 ## - Prom 282706 - 282765 5.8 - Term 283405 - 283449 -1.0 262 136 Tu 1 . - CDS 283685 - 284095 114 ## - Prom 284122 - 284181 3.3 + Prom 284039 - 284098 5.8 263 137 Tu 1 . + CDS 284276 - 284428 163 ## + Prom 284565 - 284624 2.0 264 138 Tu 1 . + CDS 284659 - 284859 107 ## + Term 284914 - 284961 -0.8 + Prom 284932 - 284991 4.2 265 139 Tu 1 . + CDS 285232 - 285366 145 ## 266 140 Op 1 . + CDS 285476 - 285754 249 ## ECO103_2862 hypothetical protein 267 140 Op 2 . + CDS 285742 - 286572 71 ## ECB_01327 exonuclease VIII, 5' -> 3' specific dsDNA exonuclease 268 140 Op 3 . + CDS 286565 - 287401 383 ## COG3723 Recombinational DNA repair protein (RecE pathway) 269 140 Op 4 . + CDS 287405 - 287587 73 ## 270 140 Op 5 . + CDS 287597 - 288364 326 ## 271 140 Op 6 . + CDS 288364 - 288855 331 ## ETAE_2481 putative methyltransferase + Term 289032 - 289060 1.0 + Prom 289030 - 289089 2.8 272 141 Op 1 . + CDS 289117 - 289308 158 ## 273 141 Op 2 . + CDS 289305 - 289847 133 ## PAU_03141 DNA N-6-adenine-methyltransferase (putative dna methylase) + Prom 290507 - 290566 4.4 274 142 Tu 1 . + CDS 290771 - 291313 246 ## COG0582 Integrase + Term 291357 - 291397 4.2 - Term 291445 - 291495 12.3 275 143 Tu 1 . - CDS 291501 - 292574 1065 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) - Prom 292672 - 292731 6.4 + Prom 292631 - 292690 5.2 276 144 Tu 1 . + CDS 292763 - 293344 325 ## COG3124 Uncharacterized protein conserved in bacteria + Term 293431 - 293468 1.4 + Prom 293458 - 293517 4.2 277 145 Tu 1 . + CDS 293567 - 294169 664 ## COG0450 Peroxiredoxin + Term 294185 - 294224 3.0 - Term 294180 - 294207 1.5 278 146 Tu 1 . - CDS 294250 - 296076 1184 ## COG0366 Glycosidases - Prom 296166 - 296225 5.5 279 147 Tu 1 . + CDS 296482 - 297732 1150 ## COG0668 Small-conductance mechanosensitive channel + Prom 297808 - 297867 1.9 280 148 Tu 1 . + CDS 297934 - 298176 248 ## + Term 298194 - 298223 0.4 - Term 298182 - 298211 0.4 281 149 Tu 1 5/0.175 - CDS 298239 - 299633 1371 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 299706 - 299765 5.8 - Term 299656 - 299688 5.4 282 150 Tu 1 . - CDS 299778 - 301097 1003 ## COG1114 Branched-chain amino acid permeases - Prom 301117 - 301176 3.4 - Term 301549 - 301597 2.2 283 151 Tu 1 . - CDS 301738 - 303942 897 ## COG2200 FOG: EAL domain - Prom 304153 - 304212 6.5 284 152 Op 1 . + CDS 304484 - 304726 163 ## NT01EI_1027 hypothetical protein 285 152 Op 2 1/0.579 + CDS 304792 - 306228 1484 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) + Term 306336 - 306371 0.2 + Prom 306446 - 306505 4.9 286 153 Tu 1 . + CDS 306671 - 309430 1538 ## COG2202 FOG: PAS/PAC domain + Term 309499 - 309523 -0.3 287 154 Op 1 4/0.281 - CDS 309441 - 309923 412 ## COG0350 Methylated DNA-protein cysteine methyltransferase 288 154 Op 2 . - CDS 309923 - 311356 842 ## COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase + Prom 311413 - 311472 3.1 289 155 Tu 1 . + CDS 311531 - 312904 1032 ## COG0443 Molecular chaperone 290 156 Tu 1 . - CDS 312991 - 313530 461 ## COG4420 Predicted membrane protein + Prom 313763 - 313822 7.8 291 157 Op 1 . + CDS 314041 - 314271 108 ## 292 157 Op 2 . + CDS 314261 - 315622 1388 ## COG0531 Amino acid transporters + Term 315648 - 315676 2.1 - Term 315634 - 315662 2.1 293 158 Op 1 . - CDS 315687 - 316166 443 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 294 158 Op 2 . - CDS 316171 - 316599 489 ## COG2005 N-terminal domain of molybdenum-binding protein - Prom 316634 - 316693 3.3 - Term 316658 - 316694 -0.8 295 159 Tu 1 . - CDS 316701 - 317027 114 ## ETAE_0941 hypothetical protein - Prom 317269 - 317328 4.8 + Prom 317051 - 317110 5.2 296 160 Tu 1 . + CDS 317317 - 317520 307 ## ETAE_0940 hypothetical protein + Prom 317525 - 317584 8.6 297 161 Tu 1 . + CDS 317635 - 318060 271 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 318192 - 318218 0.3 + Prom 318112 - 318171 4.1 298 162 Tu 1 . + CDS 318363 - 318494 78 ## + Term 318523 - 318576 12.1 - Term 318522 - 318553 1.0 299 163 Tu 1 . - CDS 318574 - 319248 557 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 319325 - 319384 4.4 - Term 319327 - 319380 13.3 300 164 Tu 1 . - CDS 319414 - 320376 695 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 320523 - 320582 8.6 - Term 320550 - 320595 10.4 301 165 Tu 1 . - CDS 320666 - 320878 283 ## COG1278 Cold shock proteins - Prom 321107 - 321166 8.4 + Prom 320585 - 320644 4.8 302 166 Tu 1 . + CDS 320790 - 320978 87 ## - Term 321242 - 321276 3.2 303 167 Tu 1 . - CDS 321327 - 321965 215 ## CKO_01822 hypothetical protein - Prom 322101 - 322160 9.4 304 168 Tu 1 . - CDS 322221 - 322661 269 ## COG1846 Transcriptional regulators - Prom 322748 - 322807 8.6 + Prom 322736 - 322795 7.0 305 169 Op 1 2/0.456 + CDS 323033 - 323677 559 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 306 169 Op 2 3/0.351 + CDS 323674 - 324438 807 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 307 169 Op 3 4/0.281 + CDS 324435 - 325901 1312 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 325905 - 325952 0.4 308 170 Op 1 4/0.281 + CDS 325970 - 326827 709 ## COG3384 Uncharacterized conserved protein 309 170 Op 2 1/0.579 + CDS 326837 - 327220 429 ## COG3232 5-carboxymethyl-2-hydroxymuconate isomerase + Prom 327228 - 327287 2.0 310 171 Op 1 1/0.579 + CDS 327308 - 328786 1162 ## COG1012 NAD-dependent aldehyde dehydrogenases 311 171 Op 2 5/0.175 + CDS 328794 - 329615 608 ## COG3971 2-keto-4-pentenoate hydratase 312 171 Op 3 6/0.035 + CDS 329626 - 330438 906 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 313 171 Op 4 5/0.175 + CDS 330462 - 331838 1135 ## COG0477 Permeases of the major facilitator superfamily 314 171 Op 5 . + CDS 331915 - 332802 735 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 332893 - 332952 4.3 315 172 Op 1 4/0.281 + CDS 333012 - 334574 1332 ## COG2368 Aromatic ring hydroxylase 316 172 Op 2 . + CDS 334595 - 335107 449 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family + Term 335122 - 335167 9.1 317 173 Tu 1 . - CDS 335141 - 336037 565 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 336068 - 336127 2.4 + Prom 335988 - 336047 1.7 318 174 Tu 1 . + CDS 336119 - 336250 57 ## + Prom 336266 - 336325 4.2 319 175 Op 1 30/0.000 + CDS 336419 - 337264 721 ## COG0811 Biopolymer transport proteins 320 175 Op 2 . + CDS 337271 - 337705 532 ## COG0848 Biopolymer transport protein 321 175 Op 3 . + CDS 337760 - 338653 621 ## COG3016 Uncharacterized iron-regulated protein 322 175 Op 4 . + CDS 338653 - 339438 558 ## COG0810 Periplasmic protein TonB, links inner and outer membranes 323 175 Op 5 1/0.579 + CDS 339536 - 341641 1458 ## COG1770 Protease II 324 175 Op 6 . + CDS 341698 - 343962 1630 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 343971 - 344012 9.5 - Term 343955 - 344000 4.3 325 176 Tu 1 . - CDS 344033 - 344359 323 ## COG1742 Uncharacterized conserved protein 326 177 Op 1 2/0.456 - CDS 344465 - 345910 1121 ## COG1538 Outer membrane protein 327 177 Op 2 6/0.035 - CDS 345907 - 347859 1181 ## COG1289 Predicted membrane protein 328 177 Op 3 . - CDS 347869 - 348897 930 ## COG1566 Multidrug resistance efflux pump + Prom 348900 - 348959 2.6 329 178 Tu 1 . + CDS 349010 - 349294 77 ## + Term 349322 - 349362 4.3 - Term 349308 - 349350 3.5 330 179 Op 1 . - CDS 349366 - 349671 321 ## ECS88_1014 chaperone-modulator protein CbpM 331 179 Op 2 . - CDS 349671 - 350588 912 ## COG2214 DnaJ-class molecular chaperone - Prom 350648 - 350707 3.9 332 180 Tu 1 . - CDS 350729 - 351433 267 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 351653 - 351712 7.0 + Prom 351925 - 351984 2.0 333 181 Tu 1 7/0.035 + CDS 352146 - 352709 289 ## COG3539 P pilus assembly protein, pilin FimA + Prom 352741 - 352800 4.7 334 182 Op 1 10/0.018 + CDS 352828 - 353496 256 ## COG3121 P pilus assembly protein, chaperone PapD 335 182 Op 2 . + CDS 353520 - 356087 1077 ## COG3188 P pilus assembly protein, porin PapC + Term 356244 - 356290 8.3 336 183 Op 1 . + CDS 356520 - 357329 252 ## ESA_03812 hypothetical protein 337 183 Op 2 . + CDS 357356 - 358120 153 ## COG2200 FOG: EAL domain 338 183 Op 3 . + CDS 358131 - 358736 -148 ## + Prom 358749 - 358808 5.3 339 184 Op 1 . + CDS 358851 - 359744 159 ## COG3710 DNA-binding winged-HTH domains + Prom 359859 - 359918 5.4 340 184 Op 2 . + CDS 359941 - 360222 66 ## + Term 360459 - 360504 8.4 - Term 360764 - 360802 2.4 341 185 Tu 1 . - CDS 360813 - 361997 570 ## COG2814 Arabinose efflux permease - Term 362127 - 362170 -0.9 342 186 Tu 1 . - CDS 362193 - 363251 839 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 363344 - 363403 4.0 + Prom 363374 - 363433 6.2 343 187 Tu 1 . + CDS 363529 - 364425 616 ## COG0583 Transcriptional regulator 344 188 Op 1 . - CDS 364627 - 365595 622 ## COG0524 Sugar kinases, ribokinase family 345 188 Op 2 . - CDS 365595 - 366971 911 ## Kvar_5014 inulin fructotransferase (DFA-I-forming) (EC:4.2.2.17) 346 188 Op 3 . - CDS 367026 - 368714 844 ## COG1621 Beta-fructosidases (levanase/invertase) 347 188 Op 4 1/0.579 - CDS 368698 - 370119 593 ## PROTEIN SUPPORTED gi|90020673|ref|YP_526500.1| ribosomal protein L9 - Prom 370161 - 370220 3.5 348 189 Tu 1 . - CDS 370237 - 371247 354 ## COG1609 Transcriptional regulators - Prom 371372 - 371431 3.9 + Prom 371352 - 371411 4.4 349 190 Tu 1 . + CDS 371637 - 371864 100 ## - Term 371993 - 372024 -0.4 350 191 Op 1 1/0.579 - CDS 372030 - 373085 764 ## COG1064 Zn-dependent alcohol dehydrogenases 351 191 Op 2 . - CDS 373166 - 373993 881 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 374110 - 374169 3.1 - Term 374418 - 374467 12.5 352 192 Tu 1 . - CDS 374667 - 375797 413 ## COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain + Prom 376253 - 376312 4.9 353 193 Op 1 1/0.579 + CDS 376518 - 376775 182 ## COG3811 Uncharacterized protein conserved in bacteria 354 193 Op 2 . + CDS 376786 - 377697 719 ## COG0500 SAM-dependent methyltransferases + Term 377701 - 377755 13.1 + Prom 377739 - 377798 3.7 355 194 Tu 1 . + CDS 377825 - 378076 192 ## KPK_4970 hypothetical protein + Prom 378351 - 378410 3.0 356 195 Tu 1 . + CDS 378508 - 378828 251 ## + Term 378859 - 378892 2.9 - Term 379342 - 379382 1.1 357 196 Op 1 . - CDS 379472 - 380155 -73 ## - Term 380179 - 380205 0.1 358 196 Op 2 . - CDS 380217 - 381587 1470 ## COG3468 Type V secretory pathway, adhesin AidA Predicted protein(s) >gi|316918893|gb|ADCU01000013.1| GENE 1 375 - 1244 431 289 aa, chain + ## HITS:1 COG:no KEGG:SPAB_01591 NR:ns ## KEGG: SPAB_01591 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 4 286 3 278 281 242 52.0 9e-63 MNIFKKTLLAATVSATFFSMQANAELKANSATSEPTLASVGYRPVQTNEGGKKLTVKGNL TTGAQLEITNIAYTDSDGDKLSLDKMVQSEEGIKWYLVDNNDSATSGDPAGVGKTFEIPA DAAGKKVKVIYRIQTDTGVPSNAFLPTAVLLTKASSGVDGEGSADGSITNKLKLVNIEVK YPSGVSGPTNELNGNDIQGTPIVGSTLVATLTCADDAADVCDVKNYNFKWQMAENKSSEY IDITPTGDIAHQYQIQGTQQNKLFRVLVTPNNSLKSDASAQKNKRAKPL >gi|316918893|gb|ADCU01000013.1| GENE 2 1362 - 3410 940 682 aa, chain + ## HITS:1 COG:no KEGG:EFER_1570 NR:ns ## KEGG: EFER_1570 # Name: not_defined # Def: putative invasin-like protein; putative exported protein # Organism: E.fergusonii # Pathway: not_defined # 1 675 1 667 672 881 60.0 0 MKFTQSPLARCLTWALVSSQLITPTAIATATLPSLNRHLDNSTSVETEKPDLASAKQQQD LWLANTAATIGGQLQEGDLSEYAKNQIVAYPESLANDAINKSITSFFPQAQFRGGIQLED GTQFRSAEADVLLPLMQNTSSLIFGQLGLRAHDNNSFDGRTFVNLGVGYRRDVGPWLFGM NTFLDGDVKYNHLRGSIGLEAFRNTLTFSSNYYFPLTNWKTSEVRDLHDERPATGFDLRA KGSLPSLPWFGAEIAYEQYFGDKVDVLGNETLSNDPNAISGAIILRPVPLIEVRAGYKDA GDGGSQAEGGINLNYIFGMPLSAQLDPSRVLSANNSTNKTAFVDRNYNIVMEYREQKSKI SVHAIPINGIAGQTVTLHAGVSSRYPIEKLEWLGDAELLAGLKAQGNLNSPLLLPELPLT IAANKEYALYLKVTDSKGNSVTSERIPVTVTVNPESFRSHINVIHENVRHENGVFILPSP EVNDTEGAVIEWHYVRERSKDEWITLKPENVKYSSDSAGLQFTPLGGEERDGHWIERVKV NVYETQSRAKLSPVDLHISASGPNGIHSISGTIRMTPEVDLTKKINMLEVLFTPGTDELN GSTAAPVVGSELQARATCEDNIDCTSIFTYQWEISADGQRWDSILGANKAKWVMPPMLNG QSLQNKKVRVKVTAEAGGSYMQ >gi|316918893|gb|ADCU01000013.1| GENE 3 3650 - 4966 241 438 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLIGPKNGQEIFDYDNHFGANEQSLYECDIYLVDENNNEHQIENNYQGCIRDSFDKIEYP ISDSALGYFIKFNIIKKTNPTSTTGYTAVPSSSLTYTYITPVKITGEFEAEKSIFSLNPQ KINADNIDTSNLIFIPKDKFGNTMSGMAKVIKFSIKDHNGNTPSTPDITLSNIEEHAPGE YTASLKGTLNGEYTIEPSIDGKMTGINKKIILSDRDKSSFRVAFVEVNGHKIKVDRNNND SPDDDVVTIPSVFAGAKLSIYLEGGNPSYKIKTEESSSMYASVSMTDPDTHSATVTVNKH FVNSKDGAISLRVQDSHQYEFTFNIKFDEYFLSLDKMVSQEKGEQLCEKNGYVLPYLGTF GDPSGVFGKGSLSASTLLWGGYDKYGFNNARELHWTASGFVSDTALTYRLSKPQNSNIPY GIARERSSAHHIICKKSF >gi|316918893|gb|ADCU01000013.1| GENE 4 5043 - 5858 179 271 aa, chain - ## HITS:1 COG:STM1671 KEGG:ns NR:ns ## COG: STM1671 COG2207 # Protein_GI_number: 16765014 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 8 268 15 284 285 117 32.0 2e-26 MKDLYSWIDNNIESDLSVDEIVARSGYSRRHLYNLFVQQTGKSVAEYIRLKKLRYAATLL KLTHMSIVDISIRFGFDSSQSFSRLFKKIYQLTPSDYRRSHCWDISKYIVDNEQPSWLKA KVIYIGENIGLSGKDFNYEFDVSHRDSSWKPVAKKIIQDLKKEVMSFGRREIFTHIEYSP SFYNKEKVSVNYMIAEKCSLSESIKNIDIGIYLKVYYHGSIDDIIGISKLAYTQFLLKSD FIRRSGCDFEYIRVNSDGSILYSYNIPVSIK >gi|316918893|gb|ADCU01000013.1| GENE 5 5957 - 6793 79 278 aa, chain - ## HITS:1 COG:STM2867 KEGG:ns NR:ns ## COG: STM2867 COG2207 # Protein_GI_number: 16766173 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 150 269 167 286 295 97 42.0 3e-20 MNCKIKKTSDGNNKIKASVIVKKVHVVNSVLVRLTGGHAWVELGINNVEVVELNQGDVIF IEKGQYISFCHEKKSEEDHVQIIELNDEVLIELFPIMSHLSPVTLAKKVSRRIVTYYKIK DKPYISHVFFELNGVMRTRSELGYKEYLHSVYYVLSFFTCLQGFVSVIERTIKVKYCDKL YNIIINDINNKWTLELCASILYVSVSTLKRRLAMEGKSFREVYLDARMNASLILLRTTKL SISDIAIESGFRSCSSFSTTFKKYFGVSPKRLSLQIHY >gi|316918893|gb|ADCU01000013.1| GENE 6 6890 - 7156 57 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKTTNLSYALSICAIEHKLSATELKIISFIANGVSLTEVSRITQRSIKTLSTHKRSAYV KIGVESDVGFIHYLYAINFILNEESPST >gi|316918893|gb|ADCU01000013.1| GENE 7 7557 - 8105 -89 182 aa, chain + ## HITS:1 COG:STM2867 KEGG:ns NR:ns ## COG: STM2867 COG2207 # Protein_GI_number: 16766173 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 57 165 159 267 295 74 35.0 1e-13 MSELYPTLNKTKPIKKGGNIYKLSNSIEHRIIYRSPCNELIKKIFSEFNESKSPVHNDHQ MKKTMIFILLNNLVNMSGFIDLLAKCIKPTLHERVYDLVTRELNKKWTIKKITSALEINE SSLKRQLVIEGTSTKKIVNEARFNMAIRLIRGGKHKIKDIVLMCGIKDKNTIQFLSDVFF NN >gi|316918893|gb|ADCU01000013.1| GENE 8 8210 - 9022 292 270 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 27 265 5 239 245 117 34 8e-25 MGLTAPETLPLLDVQALPAEQTALAAQDLNLFYGAKQVLFDVNLRVPKNRVTALIGPSGC GKSTLLRCFNRMNDLVEQCRVEGEVSVNGSRVSGNDVDVAALRRRVGMVFQRPNPFPKSI YENVVYGLRLNGVRDRRVLDETVERALRQAALWHEVKGRLSENAFKLSSGQQQRLVIARA IAIEPEVLLLDEPTSALDPISTLTIEELIVGLKQNYSVVLVTHNMQQAARVSDYTAFIHQ GEVVEYADTDTLFTSPRQKRTEDYITGRYG >gi|316918893|gb|ADCU01000013.1| GENE 9 9089 - 10762 1347 557 aa, chain - ## HITS:1 COG:YPO2834_2 KEGG:ns NR:ns ## COG: YPO2834_2 COG0581 # Protein_GI_number: 16123029 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Yersinia pestis # 287 557 3 273 273 416 81.0 1e-116 MSTQSPVQNVAKTPWIRSGRPWIWLSAGAVTISLLALIGLIALLAGQGMRYFWPHSVYEF ELKSGQHIIGERYGITQVPRQQLLDAGVKLAPNAPAQLSRFLIKTGNREWENQDFLVVMA ADISHTRKPKDLLVLEREHNGNAYGYLVGLLENGQPLVGREIVRDLERRIARTKELSQKI THLRQHQLSAISAQFESLRLTQRQAEMKGKWDARLQAQVKAERQELERKHQQLIARIDAL GREQKSDSVLLRDMNGVQREIPIYEIHDAWQPNAMSTGDKARHWVKQVKKFLVDSPRESN TEGGVFPAIFGTMLMVILMSVIVMPLGVIAAVYLHEYARKNWFTRLIRIAVVNLAGVPSI VYGIFGLGFFVYVLGGSIDQLLFSESLPNPTFGTPGLLWASLTLALLTLPVVIVSTEEGL ARIPASLRQGSLALGATKAETLRRVVLPLAVPAMLTGLILAIARAAGETAPLMLVGVVKS APELPIDSVFPYLHLDRKFMHLGFQVYDGALQSPNVEAARPLVFATAFLLVTLVVGLNLA AMSIRHYLREKYRALSL >gi|316918893|gb|ADCU01000013.1| GENE 10 10759 - 12963 1378 734 aa, chain - ## HITS:1 COG:YPO2835 KEGG:ns NR:ns ## COG: YPO2835 COG4590 # Protein_GI_number: 16123030 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Yersinia pestis # 11 731 18 747 749 594 50.0 1e-169 MDHTTPALLIRDKRRAWRDRLTRYVVSTGGMVVLAMLMLIFVYLLVAVWPLFKPASIGQP QALAWPQNGNAVAVGVDATHQMVWRIDENGKGMFLALQSADKPLQSLQEQQFTTSAPSAV ASMNGDTYTIVLATVDGKVLLVSPQFHPVGKTGDTGHFAPDWAYLRGSTPEPFDNKHQPL RQVSLGTQQNQPMVAALTQDGRVLLGQLAQTGWQVRQIEVNAPVSQVLLSPEGSRLFVLS PNQLTVFPLSQAAVGKGQNIIFDPQKTAQKNIVRMALLPGASSLLLQNAEGQISQWFDVQ RNGQRELTEIRHYQPALADSMLINEPYRRVFAALAPSGKLELYSSLRENAVLQTSIESGV KTAWFDPQGKGLLVETMKGAYWYPLSNDYPEISWRTLLKPTWFENYPQPDSVWQTTSGSD NYQAKYSLWPVVFGTLKAAFYALLFATPLAVAGAIYTACFMSARQRSIVKPAIEMIGAFP TVVIGLVAAIWLAPIIENHLLALLALPVLIPLVIVGGAALWTRLFPALAQRTGYRFDVCV LLPLLTVLLVLWFMLAPHVEILLWGMPLHERLGDGYDQRNTLVVAIALGFALVPVIFSLA EDALFSVPSSLAQGSLALGATQWQTLMRVLLPSASAGIFSALMIGLGRAVGETMIVLMAT GNTPLLDNTPFQGLRALAANIAIEMPEAVVGSAHYRVLFLTALVLFLFTFVVNTLAEAVR LKLRLRYSADREGL >gi|316918893|gb|ADCU01000013.1| GENE 11 13132 - 15198 1611 688 aa, chain + ## HITS:1 COG:YPO2836 KEGG:ns NR:ns ## COG: YPO2836 COG0855 # Protein_GI_number: 16123031 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Yersinia pestis # 1 686 1 686 687 1178 87.0 0 MGQEKLYIDKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSSNLDEFYKVRFADLKRR ILISEEQGSTGASRHLLKKIQAKVLKTDQEFDSLYNELLLEMARNQIFLINERQLSENQQ VWLRQYFKNHLRQHITPILINNETDLVSFLKDDYTYLAVEIIRGHHTSYALLEIPSDKVE RFIILPPETPRRRKPMILVDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVTEME SSLMELMSSSLKQRLTAEPVRFVYQRDMPDELVELLRQKLGISSYDSVIAGGRYHNFKDF IKFPNVGNAHLVNKPLPRLRHIWFDKFRNGFDAIRDHDVLLYYPYHTFEHVLELLRQASF DPSVLAIKINIYRVAKDSRIIESMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAG VHVIFSAPGLKIHAKLFLISRKEGDHIVRYAHIGTGNFNEKTARLYTDYSLLTADARITN EVRRVFNFIENPYRPVSFEHLMVSPQNSRRMLYQLIDQEITSAQAGLSAGITLKINNLVD RGLVDRLYTASSAGVKIRLLVRGMCSLVPNIPGVSENIQVISIVDRFLEHARVYVFENHG DPLVYLSSADWMTRNIDYRIEVAVSLLDPTLRQRVLDLLELQFSDTVKARFLDKDLSNRY VPRGNRRKVRSQLAIYDYLKALEQPDNQ >gi|316918893|gb|ADCU01000013.1| GENE 12 15223 - 16746 1404 507 aa, chain + ## HITS:1 COG:YPO2837 KEGG:ns NR:ns ## COG: YPO2837 COG0248 # Protein_GI_number: 16123032 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Yersinia pestis # 1 506 1 507 519 862 84.0 0 MPLTHSNNKPQEIAAIDLGSNSFHMVIARIVNGALQVLGRLKQRVHLADGLDSNNMLSEE AMERGIACLALFAERLQGFPAENVCIVGTHSLRQAANAEEFLKRAAKVIPYPIEIISGHE EARLIFMGVAHTQPEKGRKLVIDIGGGSTEMVIGEDFDPLLVESRRMGCVSFARQFFPNG TISKDNFQRARLAAAQKLENMAWQYRIQGWQAALGASGSIKAAHEVLIALGEKDGLITPE RLELLRSEVLKYKRFSELTLPGLSEDRQAVFVPGLSILCGVFDALAIKQLRLSDGALREG VLYEMEGRFRHQDIRSRTARSLAEHYNIDREQAQRVLSTVQQLYAQWMAQNSKLVHPQLE ALLNWAAMLHEVGLSINHSGMHRHSAYILQNTNLPGFNQEQQLLLATLVRFHRKGVKLDE LPRLTLFKKKQYIPLIQILRLATLLNNQRQSTTTPESLELETDGFHWILRFPKGYLQQNN LVQLDVEKEQSYWKDVEGWHLLVEEQL >gi|316918893|gb|ADCU01000013.1| GENE 13 17236 - 17439 126 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMIYAHNSASDSSNLLFTLDNDAQRAGAYLADLIEVLLFAILLFRFNLSHASKKYFTKES SIKRIDT >gi|316918893|gb|ADCU01000013.1| GENE 14 17516 - 17938 315 140 aa, chain + ## HITS:1 COG:no KEGG:ROD_08231 NR:ns ## KEGG: ROD_08231 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 20 136 169 283 284 103 45.0 3e-21 MERKKNQTSKIIIFVALGLLAFFSAIGPTLYAMMHGIKDEARTEIDLLQSGHITEAYQAG SYSMKKIITLDEFRRNLNLSPLNFTNIEDYTFNRIAVQDNRGELSGSVTFKNDLEGDITV QMIKENKQWKLLSVELVEFR >gi|316918893|gb|ADCU01000013.1| GENE 15 18096 - 19052 862 318 aa, chain - ## HITS:1 COG:YPO3203 KEGG:ns NR:ns ## COG: YPO3203 COG0226 # Protein_GI_number: 16123364 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Yersinia pestis # 19 317 54 352 354 352 62.0 5e-97 MQGRQLKYWRAALVGVVCSVIIYPSLATANQSMLSGNLSSAGSDTMVNLMSLWSANFSQD NPNVNVQLQAAGSSSAPTALAAGAAQLGPMSRPMKAAEVSAFEQRYGYPPLAVPVALDAL VVLVHQDNPLREISFNQLDSLYSTTLRCGETSPITHWKKLGLGGEWKSRAISLYGRNSAS GTYGYFKQQVLCDGDFSPRVNELPGSASVVQAVAGSLNSIGYASIGFRASGVRTLAVSKF GSPAVEPTAENIVQGRYPLVRHLYIYVNKAPGRPLSPLTAAFMDSVLSEQGQKLVLQDGY MPLSAADIARVRAELGLK >gi|316918893|gb|ADCU01000013.1| GENE 16 19052 - 20401 913 449 aa, chain - ## HITS:1 COG:YPO3204 KEGG:ns NR:ns ## COG: YPO3204 COG0642 # Protein_GI_number: 16123365 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 1 428 1 428 438 702 81.0 0 MLERLSWKRLLLELVFCCIPALILGLLIGYLPWFLLTAVLALLGWHCYNQLRLSHWLWVD RSMTPPAGRGSWEPLFYGLYQMQQRNRRRRRELALLIKRFRSGAESLPDAIIMTTEEGNI FWCNGLAQHLLGFRWPEDNGQHILNLLRYPEFTQYLQSQDFTRPLTLHLNNGRFVEFRVM PYAEGQLLMVARDVTQTRQLEGTRRNFFANVSHELRTPLTVLQGYLEMMNDEDMAAPVRQ KALVTMQEQTRRMDSLVKQLLTLSKIEAAPPIALNEIVDIPVMLHMLEREALSLSNGRHE ITFRINDKLKVFGNDDQLRSAVSNLVYNAVNHTPDGTKIEVCWQQTAQGAQFEVSDNGPG IAPEHLGHLTERFYRVDKARSRQTGGSGLGLAIVKHALNHHEATLNIMSEIGLGTRFVFT LPPHLIVPLDSEKPTAKNKGQKGLPSKEI >gi|316918893|gb|ADCU01000013.1| GENE 17 20511 - 21200 653 229 aa, chain - ## HITS:1 COG:YPO3205 KEGG:ns NR:ns ## COG: YPO3205 COG0745 # Protein_GI_number: 16123366 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Yersinia pestis # 1 229 1 229 229 423 93.0 1e-118 MARRILVVEDEAPIREMVCFVLEQNGYQPVEAEDYDSAVNSLSEPYPDLVLLDWMLPGGS GIQFIKHMKREALTREIPVMMLTARGEEEDRVRGLEVGADDYITKPFSPKELVARIKAVM RRISPMAVEEVIEVQGLSLDPTSHRVMANEAPLDMGPTEFKLLHFFMTHPERVYSREQLL NHVWGTNVYVEDRTVDVHIRRLRKALELSGHDKMVQTVRGTGYRFSARF >gi|316918893|gb|ADCU01000013.1| GENE 18 21419 - 22678 1029 419 aa, chain + ## HITS:1 COG:YPO3206 KEGG:ns NR:ns ## COG: YPO3206 COG0420 # Protein_GI_number: 16123367 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Yersinia pestis # 1 404 1 400 414 519 66.0 1e-147 MRLIHTSDWHLGQHFYTKSRSAEHQAFLSWLIKQASEHQVDAIIVAGDVFDTGSPPSYAR ELYNRFVVELQTTGCQLVVLGGNHDSVATLNESRDLLACLNTQVIASSAGDLQHQVLPLK QRDGSVGAILCAVPYLRPRDIQTSMAGQSAAEKQNALQQAIAEHYQSLYDLAAAQRDALG GNLPIVATGHLTTIGASTSDSVRDIYIGSLDAFPASAFPPADYIALGHIHRPQRVTSSEH IRYSGSPIPLSFDELGSEKSICLVDFTGSTLEKVTLLPVPQFQPMQLIKGSIEQIEQQLA AFKDCDNEKPIWLDIEISSSAYLNDLQRRIQQQTESLPVEVILLRRSKEQRLSALTRQDK ETLSELSVSDVFERRLEQEETEDENVLAQQARIRTHFHRVLDALVLEQNQDDTAEGHNA >gi|316918893|gb|ADCU01000013.1| GENE 19 22675 - 26361 3246 1228 aa, chain + ## HITS:1 COG:ZsbcC KEGG:ns NR:ns ## COG: ZsbcC COG0419 # Protein_GI_number: 15800123 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Escherichia coli O157:H7 EDL933 # 289 1226 216 1046 1047 336 38.0 1e-91 MKILSLRLKNINSLKGEWKIDFTREDFANNGLFAITGPTGAGKTTLLDALCLALYHQTPR LKVSPTQNELMTRGTAESLAEVEFEVKGTGYRAFWSQRRANNKPEGNLQAPKVELAYIAD GEIITDKIQTKLHKIAEITGLDFGRFTKSMMLSQGQFAAFLNADPAERAELLEELTGTEI YGQLSEQIFQRFKQAKIDLDALHERAAGVELLSEEALAQLAERLALLQNEEQRQETARKT LTSELQWLQKHQELTQNRELCNQRTTQAQQQWLDAQPEILRLERSEPAEKLRPLLQSLRQ TRSDLSLLLKSQQQRQEQQQRLASQLEPLQTASAHALTAKQQQQQIRTTTETLINQHVVP LDARLAQTRDALTQQRQKLTQIDAEKQQHNTALGQLREQLQKQQRELSQLQQTLTQTAPH AEWNNHLGRWKSQFEQSAESQQTLSDLQKRIANAEKVITADAEKLTLQQQAGASLNQRLI EQQKRCAEAEEHYQQAQQNHNLQQLEAMREKLHSGQPSRQILLQTSPLFEKAAQRQQQLQ QQTAQRSQELQTLEQQLAAKRLAYKEKRQHLIDLEKQIDLQRRVIGLEQERARLVAGDPC PLCGSLEHPAVENYQAPILSDSEQRRDALRLEVETLSREGSELGERQKLLLQTQSQQQQE TQTVDQEITQYQRRWEQTTATLELKIAIEDRSALENYLVDIVQQEDSIQKSIRQQETLNK TWQQAKDELNKIQQETSHTIQQITLLEQSIQTQRRQLAEWREEYHKQTSHQQQRQERLAT ELLELHLVAPLAGEENEWLAAREQEFSLWQQRQLHSQKLTLENTRLSADEQNLSQTLATL EKQWLTQQQLCAEQEKLLAQMQAERQTLLDGRSVDDVRRSLVQTEQLAEHQLQQAQHAES TVRQQLDKLSGELSSAQQQLSQLEQRLSQQQTDFEQALAASQFRDEENLLAALLDENEHQ RLTTLREHSKNQLSQAQAFLQQADAALADWVTQRPATLADDSTLEHLNQQLTALAEQLRE NSVQQGQIQQQIRSDAERKQGQQSLFARIEQSRQEYEDWSYLNQLIGSSSGDKFRKFAQG LTLDHLVYLANQQLSRLHGRYLLQRKTSDALELEVVDTWQADAVRDTRTLSGGESFLVSL ALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDTALDALDTLNASGKMIGVISHVEAMK ERIPVQIKVKKVNGLGISRLEAQYAVGE >gi|316918893|gb|ADCU01000013.1| GENE 20 26563 - 26919 272 118 aa, chain - ## HITS:1 COG:STM1632 KEGG:ns NR:ns ## COG: STM1632 COG3326 # Protein_GI_number: 16764976 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 112 1 111 114 140 66.0 6e-34 MNINRFCYLLLVLAAVGSLFSMHPLVMWCLLLNALTLIIYGIDKLAAVKSWQRVPEMTLL FFGLIGGWVGAILGQQIFRHKTQKQPYKTYFIITVILNLAVTLGAMYWVYQYGIGVQW >gi|316918893|gb|ADCU01000013.1| GENE 21 27181 - 27504 433 107 aa, chain + ## HITS:1 COG:ECs3267 KEGG:ns NR:ns ## COG: ECs3267 COG1445 # Protein_GI_number: 15832521 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Escherichia coli O157:H7 # 1 106 1 105 108 151 86.0 2e-37 MSKKFIALCACPMGLAHTFMAAQALEDAAKAAGYDQIKIETQGADGIENRLTAQDIAEAD IIIHSVAITPEDNERFENRDVYEITLQDAIKNADGIIKEIEEMIQAG >gi|316918893|gb|ADCU01000013.1| GENE 22 27553 - 28809 1165 418 aa, chain + ## HITS:1 COG:ECs3266 KEGG:ns NR:ns ## COG: ECs3266 COG1299 # Protein_GI_number: 15832520 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli O157:H7 # 1 417 1 415 415 570 77.0 1e-162 MAIKKRSAVNPSANGGASLTANPASTPTAKPSIWGDLPQHVMSGISRMVPTLIMGGVILA FSQLIAYAWLDVPPDMGILDAINTGKYVGFNLSLMKFAYLSQSFGGILFSFAIPMFSAFV ANSIGGKLAFPAGFIGGLIATQPTPELTWDLSKLQWVTHSPVPSTFIGALIIAIAAGYLV KWMNAKIQLPQYLLAFKTTFLLPILSAIFVMLTMYYIITPFGGWVNACIRVLLQAAGDKG VLMYAAGISATTAIDLGGPINKAAGFIAFSFTTDHVLPVTARAIAIVIPPIGLGLATLID RRLTGRRLFSSQLYPQGKTAIFLAFMGISEGAIPFLLESPLASIPAYMTGAIVGSTAAVA LGAVQWFPESAIWAWPLVSNLGAYIFGIALGAVLTALITIFIRNILYKKGKLHIEAMS >gi|316918893|gb|ADCU01000013.1| GENE 23 28907 - 30016 760 369 aa, chain + ## HITS:1 COG:ypdF KEGG:ns NR:ns ## COG: ypdF COG0006 # Protein_GI_number: 16130317 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Escherichia coli K12 # 7 365 2 359 361 450 62.0 1e-126 MHQHSTTAISRYHSWLKQQNLDAVIVNSKQNKFAHTGLLSASGYVFITRTSQHILVDSRY IQELSAKSDDYQLHLIDGQNSAADHINQIIASENLEQVGFEGQHLSYSDSIKLMDSMNAV LKPVDVDVLRQIKNASEISTLKSACLIADRACAYIRHYIQPGMTEHQIATELEWFMKNEG AEKTAFDTIVASGIRGAMPHAKASTKRVQAGEFITLDFGAQHQGYCSDMTRTFLVSGSQP QAIEEHPLYGIYQIVLQAQLAAIAAIRPGVRCCDVDRAARDVISSAGYGDRFSHNTGHAI GIDVHENPRFSPSDITQLQPGMLLTVEPGIYLPERGGVRIEDVVLVTENGCEVLYQMPKQ LLLTGGEAQ >gi|316918893|gb|ADCU01000013.1| GENE 24 30013 - 31056 411 347 aa, chain + ## HITS:1 COG:ypdE KEGG:ns NR:ns ## COG: ypdE COG1363 # Protein_GI_number: 16130316 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Escherichia coli K12 # 1 345 1 344 345 464 64.0 1e-131 MNIDLLQALSNADAIASSEQEVRDILITHAKQCNKPVSFDGLGSTLIRLNQSTGPKIMIC AHMDEVGFMVRNITREGAIEVIPIGNVRQLARFMQPVRITTQEGNKVHGLLDAELHGGES RNLYVDIGATSSEEVNNSGVRIGDRVTYDSDFKILTPNSRIMGKAFDDRLGCYLLIELLH ALCDVALNAEIWLVASSSEEVGMRGGKTAANIIKPDLALILDTACWAKNFDYGAANHRQI GQGPMLVMYDKTMIPSPRLLGFIQDIALQHHIPLQTDMFSNGGTDGGNVHLCGRGIPTAV LGAPTRHGHCAASIADLRDLEQTQQLLIALIKQLNSDSVQHLTDFSH >gi|316918893|gb|ADCU01000013.1| GENE 25 31084 - 33579 1776 831 aa, chain + ## HITS:1 COG:ECs3263_2 KEGG:ns NR:ns ## COG: ECs3263_2 COG1080 # Protein_GI_number: 15832517 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli O157:H7 # 101 682 4 585 586 709 63.0 0 MLKIAFLCPLPNGLHARPAYELKEQCSQFDSEIIFINQRLAHRADAKSTLALIGTGTLFN DACQLEIHGHDEEKAYRALGLYIEQRFADSDSEPEPAAVATSRALPRSLSRFQPSLIQGY GLSDGLGHGALFIYRHTSLDVYKSQPTTVQDLLLLEHSIITLAERLNQQLANLKGQSKTI INAHLSLIQDKEFSQNIVRHLKQRKCSLAIAAIENMEEVCGKLANSASEYLRERVQDIRD ITAQLLQVAYPTINLGTPLTLYKPTIIAADDITPSQFLSLDRQYLQGMVLAQTGRTSHTL ILARSFGIPVLSGIELEALQQLDDKDVFIDAQFGVLVTEPSDDVRHYFAVAMQLEEKNRI RQLKMADLPAVTRDGRCLEIGANIGTAQEAPAAFTHGAEGVGLFRTEMLFMDRDKAPDEQ EQFEAYQQVLMNADNHPVIFRTMDIGGDKKISYLNIPQEENPFLGYRAVRIYPEFTELFT IQLRAILRAATVGYARLMIPMVHTLDEILWVKQQINAAQQSLKNEGLRYAETIELGIMVE VPSVCFIIDHFCDEVDFFSVGSNDMTQYLYAVDRNNQRVAHLYNPITPSFLRMLRQIIDV AHRRERWVGLCGELGGETRYLPLLIGLGLDELSMSSARIPAVKELARKLNAQECITLANH ACECKSAEEIEILLDSLAIPADQKPLLALENIIVPAHMTRKEQVIQYLCGNLAMQDRTDN PIELEEDIWQREDIVTTGVGFGFAIPHTKSPHIKHSSISIARLEQEIDWQSEMGNVDFVI MLTLGAQDSVSHVKVFSQLARKLVKKEFREAMRSATDASAILALLQAELTF >gi|316918893|gb|ADCU01000013.1| GENE 26 33576 - 34457 273 293 aa, chain - ## HITS:1 COG:ypdC KEGG:ns NR:ns ## COG: ypdC COG2207 # Protein_GI_number: 16130314 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 5 290 9 283 285 281 50.0 1e-75 MSLTEQAFFSELLSGLVLNPQQLKHTFFAQRYQDSQGHLQGMGGLTVKFPRLDIVLRGTY TTSARLNDDDLRHGTLTHGDLLFIPAYSNSQPTWEKDVLLLSLLFTPSYIGFSFFDKRAA SAGFHRLRKLEVPQQNAGELEHILQALSYLGARVTDPNVSRYLVLSLLHVCHSQLCLPPV NKIQRGAFLYKSICTYIQDNYAGALSRESTAAIFNITANHLSRIFQLEGNMSFIDYLHWV RLGKAKMILQKYHLNVNEVARRCGYSDGNYFCRLFKRQFGLTPSEYRKQFLSV >gi|316918893|gb|ADCU01000013.1| GENE 27 34514 - 34996 380 160 aa, chain - ## HITS:1 COG:ECs2811 KEGG:ns NR:ns ## COG: ECs2811 COG3449 # Protein_GI_number: 15832065 # Func_class: L Replication, recombination and repair # Function: DNA gyrase inhibitor # Organism: Escherichia coli O157:H7 # 1 154 1 153 157 149 46.0 3e-36 MEMIVEQRAERVFAGIRMVGPLDQNVGKGFQKLYQWIENNNVPESGDWMAIYYDNPEEVP PEEMRVDTVISVEPDFVLPANSEGVRIDTLKGGLYAVAQAHVEDGDFGRPWMEFFNDVLP RSGYVPINAPCFEKYHNDGTESGIWDFEMCVPVKKAEESA >gi|316918893|gb|ADCU01000013.1| GENE 28 35161 - 35562 220 133 aa, chain - ## HITS:1 COG:no KEGG:Smlt3586 NR:ns ## KEGG: Smlt3586 # Name: not_defined # Def: hypothetical protein # Organism: S.maltophilia # Pathway: not_defined # 2 133 51 182 182 115 35.0 5e-25 MMIITPDADWEEKWNTPSGTSPFYKKVNEAKVGETIYVLSFFSNPKSSPRHVVNIRCDIQ IIQPDGTVAMTEKNRPCFHGVLEGAPEMIYMTNAAVGFMGEEKDPKGVWTVKIAMKDQLR TEPVMLTQSFTLK >gi|316918893|gb|ADCU01000013.1| GENE 29 35996 - 37321 1167 441 aa, chain + ## HITS:1 COG:RSc3059 KEGG:ns NR:ns ## COG: RSc3059 COG0477 # Protein_GI_number: 17547778 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 8 416 6 414 431 559 70.0 1e-159 MTSSASAPTQANARTVFRVTSGNFLEMYDFMVFGYYASAIADTFFPTQSPFASLMLTLMT FGAGFLMRPLGAIVLGAYIDHHGRRRGLLITLGLMALGTLTIACTPSYHSIGMAAPLLIL AGRLLQGFSAGVELGGVSVYLSEIAPKNRKGFYVSWQSGSQQIAVIFAALLGVTLNQYLG KSVMTEWGWRIPFIVGCLIVPFLFYIRRMLEETEAFNQRKHRPSMSEITRSVASNWQLVL VGMFMVVTTTVSFYLITAFTPTYGKTVLQFTAQQSFLVTLLVGLSNLFWLPVMGALSDKV GRRPLLLLFSALMLLTSYPSLSWLVAHPSFAHLVEVELWLSFMYASYNGAMVVCLTEIMP AEVRASGFSMAYSLATAIFGGFTPAISSYLIHATGDKAMPGLWLSAAAACGLVAAIALPA IQKLNHQRTETAPNHGVATPK >gi|316918893|gb|ADCU01000013.1| GENE 30 37390 - 38298 290 302 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 1 299 3 312 323 116 31 1e-24 NVRIGIDLGGTKIEVIALENDGRELFRHRIATPRDDYAQTVEAIAGLVELAEEKTGQRGS VGVGIPGTLSPFTGLVKNANSTWLNGKPLDKDLCARLSREVRLANDANCLAVSEATDGAA AGAHLVFAVIIGTGCGSGIAIDGRVHAGGNGIAGEWGHNPLPWLNEDEWQYQKEVACYCG KSGCIETFISGTGFETDYQRLGGEKRIGAEIMSLSRQGDPRAEKAIAHYEQRLAKSLAHV INIIDPDVVVLGGGMSNVDRLYTTVPPLISSWVFGRECQTPVRKAKHGDSSGVRGAAWLW PL >gi|316918893|gb|ADCU01000013.1| GENE 31 38596 - 39507 1022 303 aa, chain + ## HITS:1 COG:YPO3212 KEGG:ns NR:ns ## COG: YPO3212 COG2974 # Protein_GI_number: 16123371 # Func_class: L Replication, recombination and repair # Function: DNA recombination-dependent growth factor C # Organism: Yersinia pestis # 1 302 1 302 303 495 85.0 1e-140 MLWFKNLLVYRLSRDVHLVPDEVEKQLGSMAFTPCGSQDMAKTGWVSPMGSHSDALTHYV NDQILLCARKEEKILPSPVLKQALQAKIEKLEGEQGRKLKKTEKDSLKDEVLHTLLPRAF SRFSQTWLWIDMANGLIMVDAASPKKAEDTLALLRKSLGSLPVVPLTMESPIELTMTEWV RSGEVPAGFTLQDEAELKAILEEGGVIRCKKQDLVSDEIAVHIEAGKLVTKLALDWQERI QLVLSDDGSLKRLKFSETIRDQNEDIDRDDYAQRFDADFILMTSELAALIKNLVEALGGE SEK >gi|316918893|gb|ADCU01000013.1| GENE 32 39608 - 39895 312 95 aa, chain - ## HITS:1 COG:YPO3213 KEGG:ns NR:ns ## COG: YPO3213 COG3123 # Protein_GI_number: 16123372 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 95 1 95 95 145 76.0 2e-35 MLNVNEYFAGKVKSIGFDSGSIGRQSIGVMDAGEYTFSTDKPEEMTVITGALRVLIPGAP DWQVFSSGETFFVPGHSEFNLQVAEPTSYLCKYLS >gi|316918893|gb|ADCU01000013.1| GENE 33 40023 - 40976 1076 317 aa, chain - ## HITS:1 COG:PA3795 KEGG:ns NR:ns ## COG: PA3795 COG0667 # Protein_GI_number: 15598990 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 1 317 1 316 316 352 59.0 5e-97 MKLRELGRSGIRVPTLTFGGNVFGWTVDQATSFSLLDALLEHQLNFIDTADVYSSWVPGN RGGESETIIGNWLQKSGKRDHIILATKVGKPMGEHRKGLSARYIREAVEASLRRLKTDYI DLYQSHDDDRDTPLAETMNAFDALIKEGKVRAIGASNYSAERLAKALEVSAELGLARYET IQPEYNLYDRQNFELELAPLVQKEHLGVINYYALASGFLSGKYRSAEDAHKSARGDGIVA KYLNHRGLGILDALEQVAHEVDASPVAVALAWQIAQPGITAPIASATSLQQLEELALAAR LTLSQSQIALITDASAY >gi|316918893|gb|ADCU01000013.1| GENE 34 41377 - 42666 1259 429 aa, chain + ## HITS:1 COG:YPO2847 KEGG:ns NR:ns ## COG: YPO2847 COG0845 # Protein_GI_number: 16123042 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Yersinia pestis # 1 403 1 403 444 456 64.0 1e-128 MSAFNKPTSRKRLWWAIAIIVVAGVIVWRYTSSGNADKPVAGAEQAQKGKTGGKAGGRRG GSGMLAPVQASETRTSNVPNYLTGLGTVTAANTVTVRSRVDGQLMKIHFTEGQQVKAGDL LAEIDPRPFQVQLAQAQGQLAKDQAILANARRDLARYQKLSKTNMVSQQELDTQASLVTQ TQGSIVADQGAVDSAKLQLTYSRITAPIDGRVGLKLVDEGNYITSGDTTGLVVLTQTHPI DVVFTLPENNIASIQQAQKENGKLEVEAWDRTNQHLLTTGTLLSMDNQIDTSTGTIKIKA RFDNQDDTLFPNQFVNVRLKVSTQSDAVVAPAAAVQMGNEGSFVWVLNDKNQVSKHAVSV GTRDASEVVITGGLSAGERVVTDGIDQLTEGATVEVIAPHTENAAQTQATSGKDKDVSAK QTTGKQDKS >gi|316918893|gb|ADCU01000013.1| GENE 35 42666 - 45815 2926 1049 aa, chain + ## HITS:1 COG:YPO2848 KEGG:ns NR:ns ## COG: YPO2848 COG0841 # Protein_GI_number: 16123043 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Yersinia pestis # 19 1038 10 1029 1052 1561 83.0 0 MQHMPVGSEEPKNEIPATGGPSRLFILRPVATTLLMVAILLAGIVGYRSLSVSALPEVDY PTIQVVTLYPGASPDVTTSAITAPLERQFGQMSGLKQMASQSSGGASVITLQFQLSLSLD VAEQEVQAAINASTNLLPNDLPYPPIYSKVNPADPPIMTIAVTSDAVAMTQVEDMVETRI SQKISQVSGVGLVTLSGGQRPAVRVRLNAPAVAAYGLDSETIRTAIANANVNSAKGSFDG PTRSVTLSANDQMKSAEDYRDLIVAYSNGAPVRLSDVATIEQAAENTKLAAWADKKPAII LNVQRQPGANVITTADSIQALLPQLTESLPKSVKLTVLTDRTETIRASVSDVQTELLLAI ALVVMVIYLFLRNVPATIIPSVAVPLSLVGTFAVMYFLNFSINNLTLMALTIATGFVVDD AIVVIENISRYIEKGEKPLDAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIIGRLFRE FAVTLAVAILISAVVSLTLTPMMCARMLSHESLRKQNRFSRASERFFERVIAKYGEWLKV VLNHPMLTLGVALSTLVLTVLLYIFIPKGFFPIQDNGLIQGTVQAPQSVSFSEMAQRQQK LAAEILKDPDVANLSSFIGVDGTNATLNSGRLQINLKPLDERKDRVQQIIPRLQTLADKI PGIKLYLQPVQDLTIDTQVSRTQYQFTLQAMSLDQLSTWVPKLIGALQESPMLKDVSSDW QDQGLVAFVNVNRDTASRLGVTMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNQDHT DGLTAFNDLYLTSSDGKNVPLNTIATIEERFGPLSINHVDQFPSTTVSFNVADGYSLEQA MKTITSTEQQLNMPVDITTHFQGATLAFESALGNTLWLIVAAIVAMYIVLGVLYESFIHP VTILSTLPTAGVGALLALIMAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGM APYDAIYQACLLRFRPILMTTLAALLGALPLMLSTGVGAELRQPLGICMVGGLVMSQVLT LFTTPVIYLLFDKVSRNTHPAKDPQESTQ >gi|316918893|gb|ADCU01000013.1| GENE 36 45812 - 48910 2444 1032 aa, chain + ## HITS:1 COG:YPO2849 KEGG:ns NR:ns ## COG: YPO2849 COG0841 # Protein_GI_number: 16123044 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Yersinia pestis # 9 1028 3 1022 1024 1584 81.0 0 MRFSPSKGFFALFINRPVATTLLTLAITLCGILGFKLLPIAPLPQVDYPVIMVSASLPGA SPETMASSVATPLERALGRIAGISEMTSSSSLGSTRIIIQFDFNRDINGAARDVQAAINA AQSLLPSGMPSRSSYRKANPSDAPIMIMTLTSDTYDQAKLYDIASTQLAQKIAQVDGVGD VSVGGSSLPAVRIELNPEALFNQGVSLDNVRTSIANANVRRPQGSIEANDKRWQVQANDE IKTAQDYQPLIIHYNNGSAVRLSDVANVKDSVENVRNAGMTNAKPAILIMIRRSADANII ETVDRIRAQIPEFRALIPASIDLQVAQDRSPTIRASLDEVESSLAIAVGLVIMVVFLFLR SGRATLIPAVAVPVSLIGTFAAMYLCDFSLNNLSLMALTIATGFVVDDAIVVLENISRHV EAGMKPKKAALIGAREVGFTVLSMSLSLIAVFIPLLLMSGLPGRLFREFSVTLSVAIGIS LVVSLTLTPMMCAYLLKQRPSRHQERIRGFGKLLLKLQQGYGKSLRWVLDHARWVLLILI ATIGLNVWLYISIPKTFFPEQDVGRLMGFIQADQSISFQAMRGKLQDFMKIVRNDPDVDN VTGFTGGSSTNSGMMFISLKPLSERKDSAQQVIARLRGKLAKEPGANLFLMAEQDIRVGG RQGNASYQYTLLSDDLSELRKWEPKIRAAFAKLPELADVSSDQQDKGSELALTYDRESMA RLGINVADANSLLNNAFGQRQISTIYQPLNQYHVVMEVAPEYTQDESSLDKMFVINSDGK AIPLSYFAKWQPANAPLSVNHQGLTAASTISFNLPEGKALSDASAAIERTMTALGVPNTV RGTFAGTAQVFQDTQNSQIVLILAAIATVYIVLGVLYESYVHPLTILSTLPSAGVGALLA LEMFGAPFSLIALIGIMLLIGIVKKNAIMMVDFALDAERNGGMSARDAIFQASLLRFRPI MMTTLAALFGALPLAFSSGDGAELRQPLGITIAGGLIMSQLLTLYTTPVVYLYFDRLRSR FSKVKTLKPLPR >gi|316918893|gb|ADCU01000013.1| GENE 37 49008 - 50432 1285 474 aa, chain + ## HITS:1 COG:YPO2850 KEGG:ns NR:ns ## COG: YPO2850 COG0477 # Protein_GI_number: 16123045 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 465 1 465 465 614 76.0 1e-175 MPEQSASVRWQLWIVAFGFFMQTLDTTIVNTALPAMAASLGESPLRMQSVVVAYVLTVAV MLPASGWLADRVGVKRVFFSAIVLFTLGSLFCAQAETLNQLLMARVLQGVGGAMMVPVGR LTVMKIVPRSQYMAAMTFVTLPGQIGPLVGPALGGFLVQYASWHWIFLINLPVGIVGAIA TLWLMPNYSMQTRRFDIRGFVMLAIGMATLTLALDDHKGLGLDTSMIYGLVLSGGIALAS YYWHAKRSDAPLFSLDLMKTPTFSLGLSGSFLGRIGSGMLPFMTPIFLQIGMGFSPFHAG LMMIPMIIGSMGMKRIVVRVVNQFGYRRVLVCATLALAAVSLALPLSAMYISLWIIPVVL FFQGMINAMRFSSMNTLTLKDLPDELASSGNSLLSMIMQLSMSLGVSIAGLLLGLFSHHQ ITADSAAIHQAFLLTYGCIALIIALPALVFLRVPDDTLENNTLERTARRRKENS >gi|316918893|gb|ADCU01000013.1| GENE 38 50429 - 51811 995 460 aa, chain + ## HITS:1 COG:ECs2886 KEGG:ns NR:ns ## COG: ECs2886 COG0642 # Protein_GI_number: 15832140 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 4 456 7 462 467 604 65.0 1e-172 MKLGITGKLFLAIFSTCILVLITMHWGVRVSFERGFIDYIKHGNEQRVRLLAAELEERYA QAGNWRFLRHNDRVIFQIMHNIEQSNEGNDTLPPHGWRTPFWVIDSRNRKMVGPPGDIPS EGTRQPVMYQGQTVGWVVTTPPERLTRNTDINFDLQQRRTSWIIVALATLLAAAVTWALS RSMLAPVKRLVNAMHKLAAGNFSTRVEVESRDELGKLAQDFNQLAITLEKNEHMRRALMA DVSHELRTPLAVLRGELEAMQDGVRQMTQDSLASLQAEVETLTKLVNDLHQLSMSDAGAL AYRKQHIDVIHLVQLAASAFHDRFSLKNITLSLDLPEKACVFGDPDRLLQLFNNLFENSL RYTDGNGQLQVKGQISDTALQLYWQDSAPGVTDEQLEKIFERFYRAEGSRNRASGGSGLG LSICQNIVEAHSGVMVAEHSPLGGLTISLQLPLDTENYKR >gi|316918893|gb|ADCU01000013.1| GENE 39 51817 - 52542 586 241 aa, chain + ## HITS:1 COG:baeR KEGG:ns NR:ns ## COG: baeR COG0745 # Protein_GI_number: 16130019 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 8 241 4 240 240 355 75.0 3e-98 MNSITGSMAIDPSGQHVLIVEDEPKLGQLLIDYLTAGGYQPHLLADGNAVLPYVHQTPPD LILLDLMLPGTDGLTLCREIRRFSDVPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPRE VVARVKTILRRCVRRTESNAEPMLIIDENRYQASFQDQLLDLTPAEFRLLKTLATQPGTV LSREQLLNHLYDDYRVVTDRTVDSHIKNLRRKLEQLENGEPFIRSVYGIGYRWEGTACKV L >gi|316918893|gb|ADCU01000013.1| GENE 40 52716 - 53057 326 113 aa, chain + ## HITS:1 COG:YPO2854 KEGG:ns NR:ns ## COG: YPO2854 COG3422 # Protein_GI_number: 16123047 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 111 1 111 112 143 76.0 8e-35 MAIGYYEIKKAKNGQFHFNLKASNGEIILSSEMYASKASADNGIASVQANSPDEAQFEIK NSSSDQPYFVLKAKNHQVIGTSEMYSSESAAKKGIQSVVKNGATTDIRDLTHG >gi|316918893|gb|ADCU01000013.1| GENE 41 53400 - 54773 1522 457 aa, chain + ## HITS:1 COG:YPO2855 KEGG:ns NR:ns ## COG: YPO2855 COG0826 # Protein_GI_number: 16123048 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Yersinia pestis # 2 457 12 464 464 832 85.0 0 MFTPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLAQGINEAHALGK KFYVVVNIAPHNAKLKTFLRDLKPVIEMGPDALIMSDPGLISMVREAFPEMAIHLSVQAN AVNWATVKFWKQMGLTRVILSRELSLEEIEEIRQQVPDMELEIFVHGALCMAYSGRCLLS GYINKRDPNQGTCTNACRWEYKVQEGKEDAVGNIVHIHEPIPVTEVPAVEPTLGIGAPTD KVFMLEEAMRPGEYMSAFEDEHGTYIMNSKDLRAIQHVERLTKMGVHSLKIEGRTKSFYY VARTAQVYRRAIDDAVAGKPFDPTLLTTLEALAHRGYTEGFLRRHVHEDQQNYDYGYSVS DSQQFVGELTGVRRDGYAEVVVKNKFSLGDSVEMMTPKGNIHFTLEAMQNKKGEPTDVAP GNGHIVYIPVPEDLDLEFALLMRNLQGTDTRNPHSAS >gi|316918893|gb|ADCU01000013.1| GENE 42 55423 - 56322 779 299 aa, chain + ## HITS:1 COG:YPO2856 KEGG:ns NR:ns ## COG: YPO2856 COG1597 # Protein_GI_number: 16123049 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Yersinia pestis # 8 299 5 296 296 407 66.0 1e-113 MHQQHSALIILNGKGAGNEEVREAIDGLRTAGHTLHVRVTWEHGDAKRYVAEAVELGVET VVAGGGDGTINEVSDALSQHSESSRPVLAVLPLGTANDFATACLIPENPQSALQLALQGR AVPIDFARVNGKRVFINMATGGFGTKITTETPEKLKSVLGGASYFLHGILRMDTLKADFC QISGPNFNWEGKALIVAIGNGRQAGGGQPLCPEARINDGKLELRVLTSDELLPALLESLL KGESNKNVIEASLPWLEISAPHDMTLNLDGEPLSAKQFRIEIEPDAINLRLPPNCPLIG >gi|316918893|gb|ADCU01000013.1| GENE 43 56543 - 57757 1079 404 aa, chain + ## HITS:1 COG:rspA KEGG:ns NR:ns ## COG: rspA COG4948 # Protein_GI_number: 16129539 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 404 1 404 404 825 93.0 0 MKIVKAEVFVTCPGRNFVMVKITTDQGLTGIGDATLNGRELPVASYLQDHVCPQLIGRDA HRIEDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLGGASREGVMVY CHTTGHSIDDVLEDYAKHKEMGFKAIRVQCGVPGMKTTYGMSKGKGLAYEPATKGNWPEE QLWSTEKYLDFTPKLFEAVRSRFGFDEHLLHDMHHRLTPIEAARFGKSIEDYRLFWMEDP TPAENQESFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRI ADFASLYQVRTGSHGPSDLSPICMAAALHFDLWVPNFGVQEYMGYSEQMLEVFPHSWTFD NGYMHPGEKPGLGIEFDEKLAAKYPYEPAYLPVARLEDGTLWNW >gi|316918893|gb|ADCU01000013.1| GENE 44 57774 - 58793 775 339 aa, chain + ## HITS:1 COG:rspB KEGG:ns NR:ns ## COG: rspB COG1063 # Protein_GI_number: 16129538 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 339 1 339 339 470 64.0 1e-132 MKSVVIQQPEQLAIEDRPIPQPQAGEVRIRVCSAGICGSDVHIFRGHNPFAKYPRVIGHE FFGIIDTVGDGVENARIGERVVADPVVNCGHCYPCSIGRPNVCTELQVIGVHRDGGFSEY ACVPARNAYLVPTRIPDAEATMIEPFSIAANICAQVKRQPNDIALVYGAGPMGLTVIQAL RGVYGVAKIIVADRISERLQMAQDNGADRLINNTNVDVADVLAQENIRPTLIIDAACHPS ILPQAIALASPAARIGIMGFSSEPCVLNQQSITSKEIAIFSSRLNSARFPQVIEWMTEKK IHPEKLITHSFPLEQVRDALVLFEQDQKTCCKVLLSFHQ >gi|316918893|gb|ADCU01000013.1| GENE 45 58890 - 60173 993 427 aa, chain + ## HITS:1 COG:STM1543 KEGG:ns NR:ns ## COG: STM1543 COG0477 # Protein_GI_number: 16764888 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 3 415 4 414 428 460 57.0 1e-129 MFKNLRWTIVFLLFLVYMINYLDRVALSITLPMIEQDLSLNAEQFGIIFGSFFFGYAVFN FIGGLAVDKFGPMLVLGVAVGLWSIFCGFTALASGFYSMLILRVLFGMAEGPICSSANKM INGWFPRKQAATAMGLLSAGSPLGGAVAGPIVGYLALAFGWRPAFMIICAIGIVWMLIWF FVVSDSPEKSRHVSQAERALITQQKHEEATTDTNQQPGHSLMFYMKQPIILVTAFAFFCY NYILFFFLSWFPSYLVQAHGLNIKEMSITTVIPWIVGFIGLALGGIISDKIYRITGKLLL SRKIVLVVCLLASAICVALAGTVTQVIPAVILMSVSIFFLYVTGSIYWAIIQDVVHKSRI GGASGFIHLIGSISGIVGPIVTGFIVQNTGKFDSAFILAGGVAALGAILVLFVIRPSRSE PELAAHI >gi|316918893|gb|ADCU01000013.1| GENE 46 60390 - 61955 1034 521 aa, chain + ## HITS:1 COG:L0023 KEGG:ns NR:ns ## COG: L0023 COG2211 # Protein_GI_number: 15673612 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Lactococcus lactis # 16 501 24 507 508 350 42.0 3e-96 MSRITRKITIPVSIGYGLTDIMGGGAFTIIGAWLLFFYTTFVGLTPIEAASIVAIARIVD AIVSLFMGSFTDHFYKTYLGKKFGRRRFFLLIGAPLMLVYSLLWITGMNYWFYLTIYLAF EIIAAIVLIPWETLPSEMTKDFNARTKLSTCRMFISALGTFLATFIPGLLIKHFGEGNAN AYLFNGIAFSIVFMVCVFISWKVTWERELTPEMYAELEKSQIKRSVREKVKAVGNLFKDY ISTLKVRAFRKHLSIYLLSFTAKDVYNTVFVFFCVYCLSISSSFAASLLSLSIVGLPVTL LAGVAMIKYGPAKLYVFAYSIMLLCLGGLLCVYLFPISNQAMVLIALAAFYQVGRCILEF TPWNVFPFIPDVDEMITRQRREGLFAAVMTFSRKTTVAIATFIVGILLQTGGFVKGSLVQ PPEATHTIAMVLFIGTTLLLVGALIQALSFRLNKTTHKILVDEIDRLKAGGSKLRVEAKT RGVIEDLTGYRYDTLWCGESNNATQDVAVPELTKPAPLRQE >gi|316918893|gb|ADCU01000013.1| GENE 47 61967 - 63436 1334 489 aa, chain + ## HITS:1 COG:ECs2151 KEGG:ns NR:ns ## COG: ECs2151 COG0246 # Protein_GI_number: 15831405 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 486 1 486 486 696 70.0 0 MKQTLLQANAVVPTYSRERLIPRIAHIGFGAFHRAHQAVYADRLAAEHGSDWGYCEINLI GGEQQIQDLHQQDNVFSVAEMSEQGWQCRVVGVVRQALHAQIDGIDAVLDVLCQPEIAIV SLTITEKGYCHYPASGVLNLEHPLIIHDIAHPRHPHSAAGVIVAALAKRRAAHLPAFTVM SCDNMQENGHVTHNVICGLAAAQSPDLAEWIEKNVTFPSTMVDRIVPAVTTATLAQIEQQ LGMADPVGVACEPFRQWVIEDNFVAGRPAWEKVGAELVSNVLPYEEMKLRMLNGSHSFLA YLGYLAGYQHINDCMQDENYRLAARTLMLDEQAPTLSVPDIDLAAYADSLIARYANPALK HRTWQIAMDGSQKLPQRMLDSVRWHLSHGSSFELLALGVASWMHYVGGIDEQGNHIEISD PLLAEIQTVVTGSSQGEKRVDALLSLTAIFGHDLAKQPRFTQAVHAAYRALLEKGAKATV AHYLVQLKK >gi|316918893|gb|ADCU01000013.1| GENE 48 63447 - 64472 884 341 aa, chain + ## HITS:1 COG:yiaK KEGG:ns NR:ns ## COG: yiaK COG2055 # Protein_GI_number: 16131446 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 3 335 2 332 332 284 43.0 2e-76 MQRITFDVMKHTVKQAFINAGLNAARADICAQIHTESSCDGIYSHGLNRVARFVDYVKQG WIAIDADPTLVKSLGAIEIYDGQRGIGITNALFATEQASKIAKENGIGIVALRNTTHWMR GGTYGWKAAEKGLAAICWTNTESCMPAWGAKNTRLGNNPFVMAVPRESGPLVLDMAMSQY AYGKLQVTRLKGEKLPYPGGYDKDGNLTDEPGPIEQSMRILPTGYWKGSSMAILLDAMAA LLSAGEPTNGIDKIQKGSCTGASQIFMVFDPTQLGGRDFTNKMADSVAAYVKSSEPAEGQ TAVYYPGELEVKTRRENLVEGIPVDDGVWDDVLKLAATNAR >gi|316918893|gb|ADCU01000013.1| GENE 49 64628 - 65335 550 235 aa, chain + ## HITS:1 COG:ECs2149 KEGG:ns NR:ns ## COG: ECs2149 COG1802 # Protein_GI_number: 15831403 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 12 233 7 228 228 254 58.0 7e-68 MSMHTPQQNYDLNGNLPVNQQIYRYLRKDIVECTIPPGTLLSEKEISTRFNVSRQPVREA FIKLAENGLVQILPQRGTFVQKISVKRVADGRFIRSAIECSIARRAAELATAEQLLMLEH NISRQKLAAQHNQTSEFLALDDQFHQLLTEIADCPLAWETIENIKATMDRVRFLTLSKVS PPESLITQHEKIYQAIADHNPESAEKAVLVHLQEMIHTITPIEQQNQDWFAQENL >gi|316918893|gb|ADCU01000013.1| GENE 50 65372 - 66346 749 324 aa, chain - ## HITS:1 COG:STM0606 KEGG:ns NR:ns ## COG: STM0606 COG0583 # Protein_GI_number: 16763983 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 15 312 3 299 300 209 37.0 4e-54 MAERNEMAERNERNSLSKIKVFDLNLLTIFEMVFIHSSVSNAAASLGMTPSAVSQSLQKL RNHFSDPLFIREGKGISPTTVAANLHEQLAQSMGQLNKAINPTPDMALKTKFVVYAPPFM SMALLPTVVRSLQNDGMDYEIVHYSSYTQRSSTEELLNFRKADIIFSPSPYVSFSTVCTP CSVEPMAVICRNDHPRVGDTLTKLDVANERFTSMNLDDAEVLTHKVMLNEVLGERHFLFS SNSMLGIISVVENTDAIGVVPQSLLDRFGSSFKVRSLKTEFEMLKTTIYMIYNKSSLQNR AFTHMLDRLKREIPTALLNRPEDN >gi|316918893|gb|ADCU01000013.1| GENE 51 66572 - 67249 615 225 aa, chain - ## HITS:1 COG:STM1761 KEGG:ns NR:ns ## COG: STM1761 COG2181 # Protein_GI_number: 16765102 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Salmonella typhimurium LT2 # 1 225 1 225 225 363 80.0 1e-100 MNYLNQFFFDIYPYMAGAIFIIGSWIRYDYGQYSWRAGSSQMLDKKGMRLASNLFHIGIL GIFAGHFLGMLTPHWMYESFLPVPVKQKMAMFAGGACGVMMLIGGVMLLKRRLTNPRVRA TSSVGDILILTLLVVQVCLGLLTIPFSAQHMDGSEMMKLVAWAQSIVTFHAGAAEHLEGV ALIFKLHIVLGLTLFVLFPFCRLVHIWSVPVEYLTRRYQIVRHRH >gi|316918893|gb|ADCU01000013.1| GENE 52 67246 - 67968 731 240 aa, chain - ## HITS:1 COG:STM1762 KEGG:ns NR:ns ## COG: STM1762 COG2180 # Protein_GI_number: 16765103 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Salmonella typhimurium LT2 # 1 230 1 230 236 271 63.0 9e-73 MITLRIVARLLDYPDEALWENQQELIAALDDANELTLAQSAQLMAYIRDFTSHDLMDVQA QYCELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYSAAGLEIDSRELPDFLPMYLEF LASRDRETARQGLLDIVPILALLGARLKDRQSQYATLFDLLLAVSGTHVESEQLSDKVAQ EARDDTPAALDAVWEEEQVKFLGEEGCASAQQNAHQRRFAGGVAPQYLSLDATPVAGERQ >gi|316918893|gb|ADCU01000013.1| GENE 53 67965 - 69524 1190 519 aa, chain - ## HITS:1 COG:STM1763 KEGG:ns NR:ns ## COG: STM1763 COG1140 # Protein_GI_number: 16765104 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Salmonella typhimurium LT2 # 1 507 1 507 511 983 88.0 0 MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGTEYAWFNNVESKPGVGYPHNWENQE KWKGGWIRKINGKLEPRMGNRVGLLSKIFANPDVPGLDDYYEPFDYDYHHLQNAPESKHQ PIARPRSLITGQRMKKIENGPNWDDILGGEFEKRAKDQNFANMQKEMYGQFENTFMMYLP RLCEHCLNPACVATCPSGAIYKRSEDGIVLIDQDKCRGWRMCLTGCPYKKIYFNWKSGKS EKCIFCYPRIESGQPTICSETCVGRIRYLGVLLYDADKIADAASAENEQDLYQRQLDIFL DPNDPAVIEQALKDGVPQGVIESAQKSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSP IQSAADAGALPHSGVLPDVESLRIPVQYLANLLTAGDTAPVLLALKRMLAMRHFKRAETV DGVTDTSALEQVGLTEAQAQEMYRYLAIANYEDRFVIPSSHREQAREAFPESKGCGFSFG DGCHGSDTTFNLFNSRRIDAIDVTHKTPRDADIHGEKRS >gi|316918893|gb|ADCU01000013.1| GENE 54 69521 - 73297 3485 1258 aa, chain - ## HITS:1 COG:narG KEGG:ns NR:ns ## COG: narG COG5013 # Protein_GI_number: 16129187 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Escherichia coli K12 # 1 1248 1 1244 1247 2260 85.0 0 MSKFLDRFRYFKQKGETFADGHGQEWNVNRDWEDGYRSRWQHDKIVRSTHGVNCTGSCSW KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRVKYPMMRKRLMK LWREAKAQHSDPVDAWASIVSDSEKAKEYKQARGRGGFVRSSWKEVNELIAASNVYTAKQ YGPDRIIGFSPIPAMSMVSYAAGARYLSLIGGVCLSFYDWYCDLPPASPMTWGEQTDVPE SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDQWLNPKQ GTDSAMALAMGHVILKEFHVQRQTEYFADYVRTYTDMPMLVLLEPREGGYYAAGRMLRAS DLVDGLGQENNPEWKTVAINQNGELTAPQGSIGYRWGEKGKWNLEQRDGTSGEEIKLQLS LLDNYDELAEVGFPYFGGIKTGESDPFNSVELQDILLHKLPVKRLQLADGSSALVTSVYD LTLANYGIERGLNDDNCAQSYDDVKAYSPAWAELVTGVSKENIVRIAREFAQNAEKTRGR SMIIVGAGVNHWYHMDMTYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWTPLAFG LDWQRPPRHMNSTSFFYNHSSQWRYETVGTEELLSPMADKTRFSASLIDLNVRAERMGWL PSAPQLGTNPLHIAEQARAAGMSPVDYTVKSLKDGSIRFAAEQPDDEKNFPRNLFVWRSN LLGSSGKGHEYMLKYLLGTEHGIQGQDLGQPGGVKPEDVEWKDNGAEGKLDLVVTLDFRM SSTCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWEIYKGIADAFSR LCEGHLGKETDIVTLPIQHDSAAELAQPFGVKDWKKGECDLIPGQTAPHIIAVERDYPNT YARFTSLGPLMDTLGNGGKGISWNTQTEVDFLKQLNYTQPDGAAAGRPKIETAIDAAEVI LSLAPETNGQVAVKAWQALSNITGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGL EDEHVSYNACYTNVHELIPWRTLSGRQQLYQDHEWMRAFGESLLVYRPPIDTRAAAPVMG KTPNGNKEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPIVWLSEDDAKELGIEDNDWI EAFNANGALTARAVVSQRVPAGMTMMYHAQERIVNIPGSEITSQRGGIHNSVTRISPKPT HMIGGYAQLAYGFNYYGTVGSNRDEFVVVRKMNRIDWLDDEGNDYTQDQKDSQQEKAK >gi|316918893|gb|ADCU01000013.1| GENE 55 73770 - 74222 268 150 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MITIKPVLLSLLVGLPLFASASESDTSTPIERQKCGKNISLTVRDVDSGHAVIGLINHKT KSWDYFYSQHGFINYRKYSQYVPVWYDTKANKYELVKQTAASSAPIFWGADKAGNYLLSL GGHNYRCGALSAPETNSRSTNENLNAVYGE >gi|316918893|gb|ADCU01000013.1| GENE 56 74537 - 75952 1150 471 aa, chain - ## HITS:1 COG:STM1765 KEGG:ns NR:ns ## COG: STM1765 COG2223 # Protein_GI_number: 16765106 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Salmonella typhimurium LT2 # 1 463 1 462 465 651 78.0 0 MTQASAPDLKQKGGVIQDWRPEEPEFWQKIGQKTAQRNLWISIPCLLLAFCVWMLFSAVA VNLNKVGFNFTTDQLFMLTALPSVSGAILRVPYSFVIPMFGGRRWTAISTIFLVIPCVWL GFAVQDPSTSFSVFVTISLLCGFAGANFASSMANISFFFPKNKQGGALGLNGGLGNLGVS VMQLIAPIAISISIFGIFGGTGHTQPDGSSLWLENAAWIWVPFLIIATLFAWFGMNDLAA SKASLSQQLPVLKRAHLWILSVLYLSTFGSFIGFSAGFAMLSKTQFPDVVILHYAFFGPF LGALARPVGGALSDRFGGIRVTLINFVLMAIFAALLFLTLPTHGIGGSFIAFYSVFMLLF LTAGLGSGSTFQMIAVVFRKITIDSVKAHGGSDEQAQREAVTDTAAALGFISAIGAAGGF FIPKAFGTSLALTGSPAGAMKVFVVFYVVCILITWFVYGRNLKTLATKKPR >gi|316918893|gb|ADCU01000013.1| GENE 57 76280 - 78058 1347 592 aa, chain + ## HITS:1 COG:STM1766 KEGG:ns NR:ns ## COG: STM1766 COG3850 # Protein_GI_number: 16765107 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Salmonella typhimurium LT2 # 8 591 9 587 598 538 50.0 1e-152 MKHFCARFSIVSQVAALMLLLGIIGIAGMSVSGWMAQSIQGNAHAINTSGSLRMQSYRLL SMVPLNSSNQRYLDELEKSLNSPVLLSAVKEEHLNGQFTALQRYWQEQLRPALIASKHPA DARENVVRFVGHLDELVSSIDHQTEQRLTMVGVVQKIFILLTLLLLAGTVFYLRRRLLHP WRQLVSMSQTIGQGNFSQRFQQTTHQDEMAILGSTLNAMSSELSLMYGKLEQLVEQKTND LQKKNQVLSYLYRASRQLHSRAPLCSRLLLVLTELQELTPLHSLQIRLYENNSDEQFDEL NCVETERPLRCPDSHCVQCLNQPEHLHAAPSHTVSWRLNDQAGKYGLILAQLPDGFSLQP EQQQLMMTLAEQITSTLALEQQADQQQQLAVMEERSAIARELHDSIAQSLSCLKMKISYL QMQSTALPDNIREQLQEMREELNAAYRQLRELLTTFRLKLSEPGLLAALQVTVAEFNQRF GFDIQLDYQLPAKSVPPHQAIHLVQIAREALSNILKHAQATQVDISVAMQNDDIVMCVRD NGLGISDTPERHNHYGLVIMSDRANSLNGECAISRRENGGTEVRVVFPQESR >gi|316918893|gb|ADCU01000013.1| GENE 58 78090 - 78752 735 220 aa, chain + ## HITS:1 COG:ECs1726 KEGG:ns NR:ns ## COG: ECs1726 COG2197 # Protein_GI_number: 15830980 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 5 220 1 216 216 285 80.0 7e-77 MNSELAPEDQYTIILIDDHPMLRSGVKQLISLEPQLKVIGEASSGQQGIELAEKLDPDLI LLDLNMPGMNGLETLDQLRTRTLSGRVVVFSVSNHEDDVISALKRGADGYLLKDMEPEDL LRSLHQAAAGQVVLSEALTPVLAASLRESRPSSERDVQQLTPRECDILKLIAQGLPNKMI ARKLMITESTVKVHVKHLLKKMKLKSRVEAAVWVLQEKVF >gi|316918893|gb|ADCU01000013.1| GENE 59 78819 - 79454 542 211 aa, chain - ## HITS:1 COG:YPO0015 KEGG:ns NR:ns ## COG: YPO0015 COG0526 # Protein_GI_number: 16120369 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Yersinia pestis # 15 207 12 204 207 208 49.0 7e-54 MKKYLLLALFSAFSLFAFASHAADYQEGKQYIKLQNKVPNAPAVVEFFSFYCPPCNQFAN VYKVGQAVNERLPQGEKVVKYHASFLGAMGEELTEAWSIAIALGVEDKVEQPLFDAVQKN KSINSKEDIRQVFIKAGIPAEEYDGAAHSFMVKSITAKQKNALEAFGVRGTPSFYVDGQY QIKNDGMQSKTVEGYRTEYADVVKFLIDHNK >gi|316918893|gb|ADCU01000013.1| GENE 60 79689 - 80159 412 156 aa, chain - ## HITS:1 COG:no KEGG:Spro_3576 NR:ns ## KEGG: Spro_3576 # Name: not_defined # Def: inhibitor of vertebrate lysozyme # Organism: S.proteamaculans # Pathway: not_defined # 4 156 1 152 152 192 60.0 3e-48 MLTMIDKKMLRIALFGVVLGISSTSFAVNIPISTSELVQQSGYQQTWQKMVKGQKNLPVW ARKGTGTSTPPEWVTWQGKKYQIGNICKPHDCANNFMYVAFSSDKKQAWGVRVEITDTPD ALEHPSKYAKYQWLGKPNEQMKAMLTNQIESKPDWK >gi|316918893|gb|ADCU01000013.1| GENE 61 80347 - 81201 626 284 aa, chain + ## HITS:1 COG:no KEGG:YPDSF_2208 NR:ns ## KEGG: YPDSF_2208 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 4 279 6 284 295 290 51.0 4e-77 MFTLPSLPPLDKSLHSAELAHPLNKLEEDKISQMVADLDLNGSMKEHYLTGWMGLCPLVM IRNYQDKRGTSNGFMLTRPGHFRFSVQAITFRIPKFLLWATFRRKPRTMALIAYQQLGEN GGGLIQYRNILDAEMKETVNQQWRDINDYLGAACYQVENDYPLWQTLENEVTEDKADALA NTLASNGKKLQKDDEFSGLWQGELFIATRPAGETSPCTSVMISWHDGDGIGSYLYGWLQD EQGKKQLALAIRPGKNEQFFTLNRFDAEHIQRAKALFSLVTHRE >gi|316918893|gb|ADCU01000013.1| GENE 62 81270 - 82148 691 292 aa, chain - ## HITS:1 COG:SMb20092 KEGG:ns NR:ns ## COG: SMb20092 COG3568 # Protein_GI_number: 16263840 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Sinorhizobium meliloti # 54 290 27 248 252 65 27.0 1e-10 MKKIILGLIPFVVFAAHADTKVLTPEKNGTPNKIYSESQAPQLTIANYNMAAARVSDLST LAKAIKAMNADIISLNEVDKNTQRSGKVDQVAELAKLTGMHAAFGKAIDFEGGEYGVALL SKYPIDKQQVFPLPSGDGEQRVLLVTQIQVPHFDSPIIMMSTHLDWQEDPTIRLQQIREI ENVTIGNTDSSFNNIASSIKLLAGDFNDTYNGPAIRELERYWNPLVVEGADMRTWPAANP ALDLDHLFAFRGQQWKIEELTVPNKKAEWKAVNWPVASDHIPVIVKMKLLEQ >gi|316918893|gb|ADCU01000013.1| GENE 63 82367 - 83167 719 266 aa, chain - ## HITS:1 COG:YPO2859 KEGG:ns NR:ns ## COG: YPO2859 COG0351 # Protein_GI_number: 16123052 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Yersinia pestis # 1 266 1 266 266 419 80.0 1e-117 MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGTSVITALVAQNTCGVQSVYQIDPLFV GAQLDSVLTDVRIDSAKIGMLANAEIVAQVAQALKRYTIPFVVLDTVMVAKSGDPLLAPE AVQAVRELLLPNVALITPNLPEAAALLACPMATNEDEMRRQGYALLEMGCQAVLMKGGHL SNNESPDWLFSADGEQRFTAPRVHTRHTHGTGCTLSAALAALRPRHHSWSETLFMAKNYL QNALEAADSLEVGQGIGPVHHFHQWW >gi|316918893|gb|ADCU01000013.1| GENE 64 83164 - 83823 375 219 aa, chain - ## HITS:1 COG:ECs2907 KEGG:ns NR:ns ## COG: ECs2907 COG2145 # Protein_GI_number: 15832161 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Escherichia coli O157:H7 # 1 210 50 259 262 234 60.0 1e-61 MVVEPAEAAQFSSIADALLINIGTLHAQRAQSMLAAIASAKQNQKPWVLDPVAVGGLTYR TEFANHLLSLQPAVIRGNASEILALSGTAPGGRGVDSIDGSLDALPAARALAQQTGAIVA VTGVTDYVTDGDKTYAVNGGDALMTRIVGTGCALSAVVAAFSVQQPDRLLAVATACRVMS LAGERAVRHSSGPGSFIPAFLDSLYQLSPQDFLRSGDIQ >gi|316918893|gb|ADCU01000013.1| GENE 65 84250 - 84957 656 235 aa, chain - ## HITS:1 COG:YPO3071 KEGG:ns NR:ns ## COG: YPO3071 COG0593 # Protein_GI_number: 16123248 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Yersinia pestis # 1 235 5 239 239 427 90.0 1e-119 MLLNTPAQLSLPLYLPDDETFASFYSGENSSLLAALQGALQQEHGTYIYFWSREGGGRSH LLHAACAELSQRGEAVGYVPLDKRAYFVPEVLDGMEQLSLVCIDNIECIAGEEEWEMAIF NLYNRILETGRTRLLITGDRPPRQLNLRLPDLASRLDWGQIYKLQPLGDEDKLLALQLRS KLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILSL >gi|316918893|gb|ADCU01000013.1| GENE 66 85039 - 86331 1369 430 aa, chain - ## HITS:1 COG:STM2497 KEGG:ns NR:ns ## COG: STM2497 COG2233 # Protein_GI_number: 16765817 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Salmonella typhimurium LT2 # 1 425 1 425 429 647 88.0 0 MTRRVIGVSERPPLLQTIPLSFQHLFAMFGATVLVPILFKINPATVLLFNGIGTLLYLFI CKGKIPAYLGSSFAFISPVMLLLPLGYELALGGFIVCGALFCLVALIVKKAGTGWLDVMF PPAAMGAIVAVIGLELAGVAANMAGLLPANGSSVDSTTITISMVTLGVTVLGSVLFRGFL AIIPILIGVLAGYALSFAMGVVDLTPIREAHWFALPTFYTPKFEWFAILTILPAALVVIA EHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTMFSGFFGSTPNTTYGENIGVMAITKV YSTWVIGGAAVLAILLSCIGKLAAAIQMVPVPVMGGVSLLLYGVIGASGIRVLIESKVDY NKAQNLILTSIILIIGVSGATIHIGAAELKGMALATIVGIAMSLLFKVISMVRGEEVIID EQEEEQTPAR >gi|316918893|gb|ADCU01000013.1| GENE 67 86550 - 87176 670 208 aa, chain - ## HITS:1 COG:STM2498 KEGG:ns NR:ns ## COG: STM2498 COG0035 # Protein_GI_number: 16765818 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Salmonella typhimurium LT2 # 1 208 1 208 208 375 94.0 1e-104 MKIVEVKHPLVRHKLGLMRENDISTKRFRELASEVGSLLTYEATADLETEKVTIDGWCGP VEVDQIKGKKITVVPILRAGLGMMEGVLEHVPSARISVVGVYRDEETLEPVPYFQKLVSN IDERMALVVDPMLATGGSMIATIDLLKKAGCHSIKVLVLVAAPEGIAALEKAHPDVELYT ASIDQGLNEKGYIIPGLGDAGDKIFGTK >gi|316918893|gb|ADCU01000013.1| GENE 68 87464 - 88519 1240 351 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 7 338 7 337 356 482 70 1e-135 MGIFAVTDKTALSYKDAGVDIDAGNALVDRIKGVVKETRRPEVMGGLGGFGALCALPQKY REPILVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEPLFFLDYYATGKLD VDTAASVITGIAEGCKQSGCALVGGETAEMPGMYHGEDYDVAGFCVGVVEKSEIIDGSKV EAGDVLIALGASGPHSNGYSLVRKILEVSHADPLAIELEGKPLADHLLAPTKIYVKSVLK LIEEHDIHAIAHLTGGGFWENIPRVLPEGTQAVIDESSWQWPAVFNWLQQTGNVSRHEMY RTFNCGVGMIIALPAVEADAAIALMNANGEKAWKIGTIAASTSEERVVINA >gi|316918893|gb|ADCU01000013.1| GENE 69 88532 - 89170 641 212 aa, chain + ## HITS:1 COG:YPO2829 KEGG:ns NR:ns ## COG: YPO2829 COG0299 # Protein_GI_number: 16123026 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Yersinia pestis # 1 212 1 212 212 327 75.0 1e-89 MKNIVVLISGNGSNLQALIDACHEGRIRARISAVFSNKADAYGLERAAHDDIPAHYLDPK AFADRDAFDLALMHEIDNYHPDLVVLAGYMRILSPRFVQHYNGRMLNIHPSLLPKYPGLH THQQALNNGDEEHGTSVHFVTDELDGGPVVLQAKVPIFEQDSEDEIIERVQVQEHAIYPL VVSWFVEGRLTTKDDAAWLDGVRLPPQGYAPD >gi|316918893|gb|ADCU01000013.1| GENE 70 89337 - 89894 458 185 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116512426|ref|YP_809642.1| spermidine acetyltransferase [Lactococcus lactis subsp. cremoris SK11] # 1 175 4 178 212 181 48 4e-44 MSSDNNVRLRPLEREDLTFVHQLDNNASIMRYWFEEPYIAFVELSELYDKHIHDQSERRF VVEHDGVKIGLVELVEIDHIHRRAEFQIIIDPAHQGHGYASKAAKLAMDHGFSVLNLYKL YLIVDKENQKAIHIYSKLGFEIEGELIHEFFINGEYRNAIRMCIFQPDYLAKYKSPTPPV NPTGL >gi|316918893|gb|ADCU01000013.1| GENE 71 89962 - 91707 1385 581 aa, chain - ## HITS:1 COG:dld KEGG:ns NR:ns ## COG: dld COG0277 # Protein_GI_number: 16130071 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli K12 # 12 572 7 567 571 898 73.0 0 MQVQPHAGNQLSDSRALIHQLTEIVGKSHILTDARKTERYRKGFRSGQGDALAVVFPSSL LEQWKVFKACVEADKIVLMQAANTGLTEGSTPSGNDYDREIVIISTQRLDKIQVLDEGKQ VVALPGSTLWHLERVLKPLGREPHSVIGSSCIGASVVGGICNNSGGSLVHRGPAYTEMAL YGRVNELGQVELINHLGIELGSTPEEILTRLEMQQYTPQDVEHDERQASDHDYAERIRDV DADTPSRFNADERRLFEASGCAGKLAVFAVRLDTFPAQKSSQVFYIGTNQPQVLTELRRH MLANFKNLPVAGEYMHRDIFDIAEVYGKDTFVMIDKLGTDKMPTFFTLKGRMDALFGKVP FLPSHLVDRTMQTLSHLLPSHLPKRLKEYRDRFEHHLMLKMSGEGIEEARTWLESYFAQA EGEFFVCTPEEGAKAFLHRFAAAGAAIRYNAVHSKEVEDILALDIALRRNDHDWFERLPP EFDDALVHRLYYGHFMCYVFHQDYIVKKGVDVHALKDKMLALLDQRGAEYPAEHNVGHLY QAKPQLKAFYQQNDPTNTLNPGIGKTSKLKNWGCGCEHHQK >gi|316918893|gb|ADCU01000013.1| GENE 72 91863 - 92594 823 243 aa, chain - ## HITS:1 COG:STM2946 KEGG:ns NR:ns ## COG: STM2946 COG0175 # Protein_GI_number: 16766252 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 243 1 243 244 418 84.0 1e-117 MSQLDLNELKALPKVEQVMALAEINTQLEKLSAQQRVQWALEHLPAEFALSSSFGIQAAV SLHLVTRELPTIPVILTDTGYLFPETYQFIDSLTEKLNLNLKVYRAVQSPAWQEARYGKL WEQGVEGIERYNDMNKVEPMNRALQELEAQTWFAGLRREQSGSRAHLPVLAIQRGVFKIL PIIDWDNQQIYQYLQQNGLSYHPLWEQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECG LHE >gi|316918893|gb|ADCU01000013.1| GENE 73 92634 - 94364 1515 576 aa, chain - ## HITS:1 COG:YPO3371 KEGG:ns NR:ns ## COG: YPO3371 COG0155 # Protein_GI_number: 16123520 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Yersinia pestis # 7 576 2 571 576 1036 84.0 0 MSNYTFSSKHPGPLVVDAPLADSERLKRESNFLRGTIAEDLNDGLTGGFNGDNFLLIRFH GMYQQDDRDIRAERAEQKLEPRHAMMLRCRLPGGVMTPQQWLGIDKFADESTLYGSIRIT NRQTFQFHGILKQNVKPVHQLLNRLGLDALATANDVNRNVLCTSNPVESELHQEAYEWAK KLSEHLLPRTRAYAEVWLDQEKVETTDEEPILGATYLPRKFKTTVVIPPQNDVDLHANDL NFVAIAENGKLVGFNVLVGGGLSIAHGDKATYARTASELGFIPVEHTLAVAEGVVTTQRD WGNRTNRKNAKTKYTLERVGVENFKAEVEKRAGVIFEPVRAYEFTGRGDRIGWVKGIDKK WHLTLFIENGRILDYPNRPLKTGMAEIAKIHTGDFRLTANQNLIVAGVAEEDKARIERIA REHGLMDDSISEQRKNSMACVSYPTCPLAMAEAERFLPQFVTQVEEIMQSHGVGDEHIVL RVTGCPNGCGRALLAEIGLVGKAIGRYNLHLGGNRAGTRIPRMYRENISDAEILAVIDEL VGRWAKERHTDEGFGDFTIRAGIVRPVLDPARDFYD >gi|316918893|gb|ADCU01000013.1| GENE 74 94364 - 96166 1971 600 aa, chain - ## HITS:1 COG:STM2948 KEGG:ns NR:ns ## COG: STM2948 COG0369 # Protein_GI_number: 16766254 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, alpha subunit (flavoprotein) # Organism: Salmonella typhimurium LT2 # 1 600 1 599 599 901 74.0 0 MTTQAPPTSMLPLTPEQLAKLQSAIGEFSPNQLAWLSGYFWGMVNQQPGAVAIAPAPAVA ASITVISASQTGNARRVSEQLRDDLTAAGLSVTLVNAGDYKFKQIAQEKLLLVVASTQGE GEPPEEAVALHKYLFSKKAPQLTGTAFAVFGLGDTSYENFCQTGKDFDTRLGELGAERLL DRADADVDFKAAAEAWRKQVVEVLKQRVPQATPAQAQASVAGSVAQVLSSPYSKESPLTA TLAVNQKITGRNSDKDVRHLEIDLGDSGLSYQPGDALGVWYHNDPDLVEEIIGLVWRTGD EKITLNGQTLTLREALTDHLELTQNTTVIVEKYASLSRDERLIELLADKHQLQQYAQTTP LPDMIRQAPADLDAEQLVALLRPLTPRLYSIASAQEEVGNEVHITVGVVRYDVEGRARTG GASGYLADRLEEEGELRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFIQQRAAEGA EGLNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQNHKVYVQDKLREQGAEV WRWIEKGAHIYVCGDANRMAKDVEQALLELLAEHGGMDAEQADEFLSELRVERRYQRDVY >gi|316918893|gb|ADCU01000013.1| GENE 75 96723 - 97082 398 119 aa, chain + ## HITS:1 COG:YPO3373 KEGG:ns NR:ns ## COG: YPO3373 COG0720 # Protein_GI_number: 16123522 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Yersinia pestis # 1 119 1 119 119 221 83.0 2e-58 MTTTLFKDFQFEAAHHLPHVPEGHKCGRLHGHSFLVRIEITGEVDAYTGWVMDFAELKAA FKPILDRLDHYYLNDIPGLENPTSEVLAQWIWQQLKPELPLLSAVLVKETCTAGCTYRG >gi|316918893|gb|ADCU01000013.1| GENE 76 97148 - 97462 284 104 aa, chain - ## HITS:1 COG:YPO2531 KEGG:ns NR:ns ## COG: YPO2531 COG4575 # Protein_GI_number: 16122749 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 11 104 10 102 102 72 39.0 2e-13 MFRKTDRVERTIEEEVSLLADALEGVLQEGADKTEDEIASLRRSAQDTLREVKARISGET PCPMTERVKSACCEVDGYVRNKPWHSVGIGATAGLILGLLLSKR >gi|316918893|gb|ADCU01000013.1| GENE 77 97754 - 98968 1084 404 aa, chain + ## HITS:1 COG:YPO2975 KEGG:ns NR:ns ## COG: YPO2975 COG0436 # Protein_GI_number: 16123156 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Yersinia pestis # 1 404 1 405 411 765 90.0 0 MTDSRTPRRFTRIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKMCT VAQREDTHGYSTSRGIPRLRRAISHWYQDRYQVDIDPDSEAIVTIGSKEGLAHLMLATLD HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVSGIDFFNELERAIRESIPKPKMMILGFP SNPTAQCVELDFFERVIKLAKEHDILVVHDLAYADIVYDGWKAPSIMQIPGAKDVAVEFF TLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIA EQYRQRRNVLVKGLHEAGWMVENPKASMYVWAKIPDAYAHLGSLEFAKKLLADAKVSVSP GIGFGDYGDTHVRFALIENQDRIRQAVRGIKGMFRKDGVIAGKS >gi|316918893|gb|ADCU01000013.1| GENE 78 99662 - 100792 817 376 aa, chain - ## HITS:1 COG:YPO2904 KEGG:ns NR:ns ## COG: YPO2904 COG0477 # Protein_GI_number: 16123095 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 375 3 376 385 466 67.0 1e-131 MPSAGWLGLSYFTYFFSFGIFLPFWSLWLQGEGISPESIGILLGAGMIARFLGSLFIAPS VKKTSQLITALRLIALLALICSIAFSFGTAWAWLLVVMAGFSLFYGPLIPLTDALAATWQ RQVGLDYGKVRLWGSMAFVIGSAVTGEVVNAFGHKAIMYCLWAGLVAMLLGMLLRPRHMP QDAPKASAVQDTTPWKILLTEAPVWRFLLCAALLQGAHAGYYGFSTIYWQEAGYSASVVG YLWSLGVVAEVIIFALSKRLFRRMSVSQLLLLSCICAVIRWSLMGSTTALPWLILIQILH AGSFTVCHLAAMRFISARQGGDVIRLQAVYSALGMGGSVAIMTMLSGFLFEHYQGGMFYA MALVVLPVIFFRPKVQ >gi|316918893|gb|ADCU01000013.1| GENE 79 100841 - 101008 104 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLAINIVGKSIRKPISPLMPTGRIQNILKIFNFHLWIGLLFDCKRYTTLKPFNLL >gi|316918893|gb|ADCU01000013.1| GENE 80 101101 - 101262 123 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTHSTSLENIDALKAEINQELSMMEFDLKLQISHDVLATYSEKESEETLEATA >gi|316918893|gb|ADCU01000013.1| GENE 81 101285 - 102085 506 266 aa, chain - ## HITS:1 COG:YPO3986 KEGG:ns NR:ns ## COG: YPO3986 COG2134 # Protein_GI_number: 16124113 # Func_class: I Lipid transport and metabolism # Function: CDP-diacylglycerol pyrophosphatase # Organism: Yersinia pestis # 31 266 31 258 258 161 36.0 1e-39 MLMFRGATLNVYRTIFSIAPLILVFLLSGCAKSDALWGVVDKVCRVNYQQKHDPAPCTQI YTPTQDLQHGFTVIQNPRFHYHFILVPNTRMSGIESSALLEKDTPDYFGLAWTMRHRLAY EYGKPIPDDVLGLALNSAYGRSQNQLHIHLTCLREDVRRQLKAERPFIREQWTLLPDTLL RHAFYAKRVVQPTLMGVYPIRSLAEPFNLTPEQLAYYGVAIVPTTFDTQPGFILLATRVG MGERNRASVESLLDKRCELLQAIPAQ >gi|316918893|gb|ADCU01000013.1| GENE 82 102087 - 102758 230 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel] # 5 222 20 224 225 93 30 1e-17 MSYPINELFQTLQGEGFYTGVPAIFIRLQGCPVGCSWCDTKHTWEQLPEREIGMNEILIK TAESDAWGSATPDQLLAILHERGYTARHVVITGGEPCIHDLRPLTELLNQHGFSCQIETS GTHEIRCSDATWVTVSPKVNMKGGMKVLESALIRADEVKHPVARERDIEDLDTLLAVLHD DKQRIIALQPISQKESATKLCIETCIARNWRLSMQTHKYLNIA >gi|316918893|gb|ADCU01000013.1| GENE 83 103079 - 104275 993 398 aa, chain + ## HITS:1 COG:STM0787 KEGG:ns NR:ns ## COG: STM0787 COG1228 # Protein_GI_number: 16764151 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Salmonella typhimurium LT2 # 1 386 19 404 407 541 67.0 1e-153 MSTQQKAPYGIIERHALIVRDKHIIAVIPEDQIPAQHPLQVDLQHRLVTPGLIDCHTHLV FGGDRAYEWEQRLNGVSYTEISQNGGGINATVRATREASPDTLLTLSQQRLHALMDEGVT TVEIKSGYGLDLINEEKQLRVAQQLARQNAVDISPTLLSAHTTPPEYRGRADAYIDLICE EILPQLWDKKLFESVDVFCESVGFSLAQSEKLFAAAHRLGIPVRGHMEQLSNLGGSQLVA SYRGLSTDHIEHLDETGIQALAHSQTVAVLLPGAFYFLRETKRPPVEMLRQYHVPMAVAS DFNPGTSPFASLRLAMNMACVQFGLTPEEAWLGVTRHAAQALNRQHSHGQLAAGFQANFA VWDAEKPVEIIYELGRNPLYQRVYQGHPTAKKPNEDAQ >gi|316918893|gb|ADCU01000013.1| GENE 84 104272 - 105225 733 317 aa, chain + ## HITS:1 COG:STM0788 KEGG:ns NR:ns ## COG: STM0788 COG0010 # Protein_GI_number: 16764152 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Salmonella typhimurium LT2 # 1 311 1 312 313 317 52.0 2e-86 MSHWQPTATDVWQGRNDLAESPEALRLFQVVGQQDEPRPVVLLGFACDEGVKRNHGRIGA AAAPDALRKMLANLAAHAGHHRLTDGGTLMVGETPLEEAQETFSQGVTAYQQRGVRTLVF GGGHETAFAHGLGIYRAHPNKTVGIINFDAHLDLRRNDVATSGTPFRQLAQHCEQDQKPF HYLCVGASLAANTQALVNEAHRLKVEIVWDTDALTRTLDDLCDQIRTFMGKCEIVYLTVD LDVLPAWQMPGVSAPAAVGLPIERLLPLIGTICESPSLWGADLVEYNPSLDPLQSGARTA ARIAWQILHQWNIGERP >gi|316918893|gb|ADCU01000013.1| GENE 85 105238 - 105972 517 244 aa, chain + ## HITS:1 COG:PA5105 KEGG:ns NR:ns ## COG: PA5105 COG2188 # Protein_GI_number: 15600298 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 4 244 5 250 250 318 64.0 5e-87 MTLSADLSTLSTPAPLYEQVKKMITDNISNGTWPPNHRIPSEAELVAHLGFSRMTINRAL RELTHQGLLIRMQGVGTFVAEPKGQSALFEVHSIRDEILARNHRHHCKIILLAEAQANSE QAAALNLGVGSKLFHSIIVHYENDTPVQIENRYVNPVVAPDYLQQDFQKITPHDYLSRVA PLTEGEHIVEAVLPSAEESQWLHIHASEPCLLIERRTWSKHHNVTYAKLLFPGTRHRLKG HFTS >gi|316918893|gb|ADCU01000013.1| GENE 86 105969 - 106568 267 199 aa, chain + ## HITS:1 COG:PA5104 KEGG:ns NR:ns ## COG: PA5104 COG3758 # Protein_GI_number: 15600297 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 156 1 155 196 132 45.0 6e-31 MNQWQILRWADYHSMPWKNGQGVTQEIMRVDSPNGRDFRWRLSMAEVTTDGDFSRYTGYQ RILSILEGEGLQLKIDGRIEPPLLICGIQRFSGDSRVSSTLLNGKVRDLNLIYDPRYYGA RLQWVTTSPNMPPLRCHASTIILFCHDGEISLTPVGGGKSITLNKYDSAVLVAPRPQTHT VELDGHGHLGVFELTGFDQ >gi|316918893|gb|ADCU01000013.1| GENE 87 106706 - 107623 1042 305 aa, chain + ## HITS:1 COG:YPO3083 KEGG:ns NR:ns ## COG: YPO3083 COG0330 # Protein_GI_number: 16123260 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Yersinia pestis # 1 304 1 304 304 478 88.0 1e-135 MFTVIPVLVVVALVIVWSGIKIVPQGFQWTVERFGRYTKTLMPGLNLIVPFMDRVGRKIN MMEQVLDIPAQEIISKDNANVTIDAVCFIQVIDPARAAYEVSNLERAIVNLTMTNFRTVL GSMELDEMLSQRDHINGRLLHIVDEATNPWGVKVTRIEIRDVRPPVELVASMNAQMKAER TKRADILEAEGVRQAAILRAEGEKQSQILKAEGERQSAFLQAEARERAAEAEAQATKMVS EAIAAGNIQAINYFVAQKYTDALQKIGSATNSKVIMMPLEASNLMGSIGGIAELLKETGP VKGKS >gi|316918893|gb|ADCU01000013.1| GENE 88 107623 - 108081 324 152 aa, chain + ## HITS:1 COG:ZybbJ KEGG:ns NR:ns ## COG: ZybbJ COG1585 # Protein_GI_number: 15800225 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Escherichia coli O157:H7 EDL933 # 1 150 1 150 152 152 58.0 2e-37 MVEYIAQNPHGFWLSLGGVLLAAELLGAGGYLLWSGISALIVGLLTWIFPFGWEWQATLF AILTVATAFLWWRWLKRSQPESKNNDDLLNQRSRQLIGARATLEAPIVNGNGRIRIGDSS WRVTCYQDLPTGTVVEVADVEGITLKVKAIRS >gi|316918893|gb|ADCU01000013.1| GENE 89 108200 - 108604 355 134 aa, chain - ## HITS:1 COG:STM0499 KEGG:ns NR:ns ## COG: STM0499 COG0789 # Protein_GI_number: 16763879 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 131 1 131 138 199 76.0 8e-52 MNISEVAKKTGLTSKTIRFYEEKGLVTAPNRADNGYRFYAEKHIEELTLLRQARQVGFTL EECRDLVDLFRDKSRHSADVKSRTLEKVAEIEHQIEELQAMRLRLMSLADECPGDDSADC PIINNLAGCCHRGK >gi|316918893|gb|ADCU01000013.1| GENE 90 108730 - 111489 2772 919 aa, chain + ## HITS:1 COG:YPO3086 KEGG:ns NR:ns ## COG: YPO3086 COG2217 # Protein_GI_number: 16123263 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Yersinia pestis # 1 917 1 960 961 1280 73.0 0 MSQTQLFALQGLSCMNCAKKVKTALEARPDVEVALLNNPRYAKVTGDADAQTIVSTVEQA GYHATLAGTPDVTLALSGLSCGHCTASVTKALEAVAGVDAADVSLTEAKIYGSADATVLI EAVKAAGYEAALAQGESHPKTEPLTQSASNSTTATQAPETLAAAETSSPAIPSTAYTLSD TDDSVQLLLDGMSCASCVLKVQNALQGVPGVEQARVNLAERSALVTGHSDPQALIQAVEK AGYGAEIIQDEEKRRARQQESAEKSVKKFRWQAALGLGLGVPLMAWGLFGGSMELTATNQ NNWLIVGLITLGVMVFAGGHFYRNAWRSLMNGSATMDTLVALGTGAAWLYSITVTLWPQV FPMEARHLYYEASAMIIGLINLGHAMEARARQRSSKALERLLDLTPPTARVVTEEGEKTL PLADVKLGMTLRLTTGDRVPVDGEIISGEVWMDEAMLTGEPIPQQKSTGDQVHAGTVVQD GSVLFRAGAIGSQTTLARIIKLVRQAQSSKPEIGQLADRISAVFVPTVVGIAIFSGLIWY FFGPQPQIVYTLVVATTVLIIACPCALGLATPMSIIAGVGRAAEFGVLVRDADALQRASE LDTLVFDKTGTLTEGQPKVVEIHTFNDVSEAQALQWAAALETGSNHPLARAITERAERLV IPDVTQFRTLRGLGVSGDVEGYTLLLGNDSLMEQQKVDISDVKALLKQQAERGITPVLLS ANGKPAALLSIRDPLRGDSVEALQRLHGLGYQLVMLTGDNPLTANAIAKEAGIDRVIAGV MPEGKADAIKALQAKGHKVAMVGDGINDAPALAQADVGIAMGGGSDIAIETAAITLMRHS LTGVADAIEISCATLRNMKQNLLGAFVYNSLGIPIAAGVLYPLTGTLLSPVVAGAAMALS SITVVSNANRLLRFKPKSK >gi|316918893|gb|ADCU01000013.1| GENE 91 111597 - 112409 728 270 aa, chain + ## HITS:1 COG:YPO3087 KEGG:ns NR:ns ## COG: YPO3087 COG3735 # Protein_GI_number: 16123264 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 264 1 264 269 275 57.0 5e-74 MKHWLRKLALWLGIVPTTTYAYPALDIHLQGGVNLHLVGSIHMGTENMSPLPDALIQRLK QADALIVEADITHSSPSFETPETETPLEFHLSHEQWLQVQQRCQETGIPVSAVQYFPAWR TALTLQAQQAHQLGLRSEYGIDYQMLRFAQQRALHVIELEGADTQMALLHSLPNNGIVLL QDTLTHWHTNARLLQTLISGWISPTESISTTDLPSTFSDELYQVLMGDRNQKWQKMLLAL PAGNYVVAVGALHLYSEGNLPELLAPYTAH >gi|316918893|gb|ADCU01000013.1| GENE 92 112740 - 113219 478 159 aa, chain + ## HITS:1 COG:YPO3088 KEGG:ns NR:ns ## COG: YPO3088 COG2606 # Protein_GI_number: 16123265 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 159 1 159 159 243 79.0 1e-64 MTPAVLLLEKNKVPFTLHQYHHDSDETNFGDEVVRKLGLNAEQVYKTLLVSLNGDAKNLA VAVTPVASMLDLKKVAKAFAAKKADMADPQLAQRVTGYLVGGISPLGQKKRLPTVIDSGA QQFDSIYVSGGKRGLDIELSAQDLSRMTNASFAEIAKRD >gi|316918893|gb|ADCU01000013.1| GENE 93 113261 - 113980 628 239 aa, chain - ## HITS:1 COG:STM4319 KEGG:ns NR:ns ## COG: STM4319 COG0671 # Protein_GI_number: 16767569 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 1 236 1 237 250 194 45.0 9e-50 MKKIVLATLVGLLVSGYGMAADDHYLKYEQAPDSLKLLPPPPAYTSIDFLSDKAHYDEGK AQRSTERGKQAYDDADVSKDSLARNFSTAFGFPISKEKTPETFTLITTMKEDAGEYATRS AKQHYNRVRPFAFYKEATCRPEDEKELSTNGSYPSGHTTIGWSVALVLAEVNPARQNEIL KRGYDLGQSRVICGYHWQSDVDAARVVGSAVVASLHNNPAFEAQLAKAKAEVQKLNQAH >gi|316918893|gb|ADCU01000013.1| GENE 94 114194 - 114406 262 70 aa, chain - ## HITS:1 COG:YPO3644 KEGG:ns NR:ns ## COG: YPO3644 COG1278 # Protein_GI_number: 16123786 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Yersinia pestis # 1 70 1 70 70 122 94.0 1e-28 MSNKMTGLVKWFDAGKGFGFISPEDGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK GPSAVNVVAL >gi|316918893|gb|ADCU01000013.1| GENE 95 114766 - 116418 1643 550 aa, chain - ## HITS:1 COG:ushA KEGG:ns NR:ns ## COG: ushA COG0737 # Protein_GI_number: 16128464 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Escherichia coli K12 # 1 550 1 550 550 831 73.0 0 MKFALKGTACALAVTLALVPTWAAAWEKDKTYNITILHTNDHHGHFWQNANGEYGLAAQK TLVDQIRQEVAAQGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFD NPLSVLRQQEKWATFPLLSANIYQQGTEKRLFKPYEVFDKQDIKIAVIGLTTDDTAKIGN PELLKGIEFRDPAVEAKTLIQQIKQNEKPDVIIAATHMGHYDNGEHGSNAPGDVEMARKL PAGYLDMIVGGHSQDPVCMASENKKQVDYVPGTPCAPDRQNGTWIVQAHEWGKYVGRADF TFRNGALTLQHYQLIPVNLSKKVTKDDGTVERAYYTHKIEQNPQMLKLLTPFEEKGKAQL EVKVGSVDGKLEGDRSKVRFEQTNMARLLLAAQMERTQADLGVMSGGGVRDSIEPGDISY KDVLKVQPFGNTVAYVEMKGSDLEKYLAVVANKKVDSGAYAQFSNVSLIADGKGVSDVKI KGEPLQADKVYRLALLNFNATGGDDYPIVSELPSYVNTGFVDAEVLKQYIEKHSPLKVSD YEPKGEIVYQ >gi|316918893|gb|ADCU01000013.1| GENE 96 116744 - 117967 1130 407 aa, chain + ## HITS:1 COG:YPO3093 KEGG:ns NR:ns ## COG: YPO3093 COG0477 # Protein_GI_number: 16123267 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 404 1 404 404 566 85.0 1e-161 MTDRIDPVSDSVTQKPVNRTSFSILGAISVSHLLNDMIQSLILAIYPILRGEFSLSFAQI GLITLTYQLTASLLQPLIGMYTDKHPKPYSLPIGMGFTLAGLLLLSVAPSFSVVLIAAAL VGTGSSIFHPESSRVARMASGGRHGLAQSVFQVGGNFGSSLGPLLAAAVIAPYGQGNIAW FSLAALLAIVVLLQVSKWYQHQTRQSKGKPKGQGAVKVLPRRTVVISLSILLVLIFSKYF YLTSISSYYTFYLIHKFGVSVQSAQIHLFAFLFAVAAGTIIGGPLGDKIGRKYVIWGSIL GVAPFTLALPYASLYWTGILTVIIGVILASAFSAILVYAQELIPGKVGMVSGLFFGFAFG MGGLGAAVLGYVADLTSIDLVYQICAFLPLLGILTALLPNIEHKDAN >gi|316918893|gb|ADCU01000013.1| GENE 97 118469 - 120166 502 565 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 4 558 5 552 618 197 26 4e-49 MHHSTPLITTIVGGLVLAFLLGMLANRLRISPLVGYLVAGVLAGPFTPGFVADTSLAPEL AEIGVILLMFGVGLHFSLKDLMAVKNIAIPGAIAQIAVATLLGMGLSSLLGWDLVTGLVF GLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLAMVLTLVLLPAFAGIMGEGQN MQLKDLLIELGITLGKVIAFITIMIVVGRRLVPWILAKTASTGSRELFTLSVLALAMGVA YGAVAIFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPMILV EQPLAVLGCLAIIVFGKSVAAFLLVKMFGHSKRTALTVSVSLAQIGEFAFILAGLGISLN MLSPEGRNLVLAGAILSIMINPLLFTLLERYLAKTETIEDQSLQEVTEEEEKQIPVDLCN HVLLVGYGRVGSLIGAKLHDAGVPLVVIENSRPRVEALREQGIHAVLGNAANPEMLELAR IDCARWLLLTIPNGYEAGEIVAFARTKRDSLDIIARAHYDDEVAYISDRGANQVVMGERE IANSMLELLQVDKMTDEDKMQGCAI >gi|316918893|gb|ADCU01000013.1| GENE 98 120808 - 122109 1285 433 aa, chain - ## HITS:1 COG:YPO3095 KEGG:ns NR:ns ## COG: YPO3095 COG0524 # Protein_GI_number: 16123269 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Yersinia pestis # 1 433 1 434 434 783 85.0 0 MKFPGQRKSKHYFPVNARDPLLHATQKSEIDTSYVVGIDQTLVDIEAKVSDEFITRYRLS QGHSLVIEDDVAEALYQELTDNKLITHEFAGGTIGNTMHNYSVLADDRSILLGVMCSNVK IGSYAYRYLCNTSSRTDLNYLQGVDGAIGRCFTLISENGERTFAISPGMMNQLRPESIPE DVIAGASALVLTAYLVRCKPGEPMREATMKAIEYAKKHNVPVVLTLGTKFVIADDPQWWR DFLRDNVTIVAMNEEEAEALTGLNDPLAASDKALEWVDLVLCTAGPVGLYMAGYTEEDGK RKTQHPLLPGVIPEFNLYEFSRPMRKVSCEVPFKIYSHIAPYMGGPEKIMNTNGAGDGAL AALLHDIAANGFHRTNVPNSSKHQRTYLTYSSLAQVCKYANRVSYQVLNQHSPRLTRGLP EREDSLEESYWER >gi|316918893|gb|ADCU01000013.1| GENE 99 122212 - 123186 676 324 aa, chain - ## HITS:1 COG:YPO3117 KEGG:ns NR:ns ## COG: YPO3117 COG0276 # Protein_GI_number: 16123282 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Yersinia pestis # 1 320 1 320 320 478 70.0 1e-135 MKQEKFGVLLVNLGTPEAPTSSAVKRYLAEFLSDKRVVDVSRLIWWPILNGVILPIRSPR VAKLYQSVWMEEGSPLMVYSRRQQAALQARLPNIPVELGMSYGQPALKNAIDKLHDAGVD RIILLPLYPQYSCSTNAAVFDGVARHFASMRRIPSLNFIRDYAEHPAYIAALCSSIRASF AQHGQPDMLLFSFHGIPQRYADQGDDYPQRCRATTQAVAHTLGLDAERYMMTYQSRFGRE PWLTPFTDKTIEQLPAKGIKHIQVICPGFSADCLETLEEIKVQNKEFFIEAGGETFEYIP ALNDDALHIELFYQLVMEQIGRSA >gi|316918893|gb|ADCU01000013.1| GENE 100 123328 - 123972 934 214 aa, chain - ## HITS:1 COG:ECs0527 KEGG:ns NR:ns ## COG: ECs0527 COG0563 # Protein_GI_number: 15829781 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Escherichia coli O157:H7 # 1 214 1 214 214 364 88.0 1e-101 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGTELGKKAKEIMDAGMLVT DELVIALVKERITQEDCRNGFLLDGFPRTIPQADAMKEAGISVDFVLEFDVPDELIVERI IGRRVHQGSGRVYHIKFNPPKVEGKDDVTGEELVTRKDDQEETVRKRLVEYHQQTAPLIG YYSAEAAKGNTKYVKLDGTQSVAAVRAELETILG >gi|316918893|gb|ADCU01000013.1| GENE 101 124198 - 125337 865 379 aa, chain - ## HITS:1 COG:STM1911 KEGG:ns NR:ns ## COG: STM1911 COG4225 # Protein_GI_number: 16765253 # Func_class: R General function prediction only # Function: Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins # Organism: Salmonella typhimurium LT2 # 1 379 1 379 379 636 77.0 0 MLVYPVKHSPLLRQPERFIARSELKNLICKMTDNLINISDETGEFLLRLDDGRVIDTKGW AGWEWTHGIGLYGIYQYYQQTGDQQMRAIIDDWFSARFAEGTPTKNVNTVCPFLTLAYRY EETRDPRWLPYLERWAEWVMYEMPRTERGGMQHVTLAEENHQQLWDDTLMMSVLPLAKIG KLLNKPEYIEEAKYQFLVHTQHLMERETGLWFHGWTFEGHHNFAKARWARGNSWLTMVIP EFIDLLDLPEYDATRRFLIQVLESQVVALAKCQDQSGLWHTLLDDPNSYVESSATAGFAY GILKAVRKRYIGAEYAAVAEKAVKGVIKNINAEGELTNVSFGTAMGRDYDYYRQIPLTSM PYGQAMAILCLSEYMRVYL >gi|316918893|gb|ADCU01000013.1| GENE 102 125400 - 126971 1081 523 aa, chain - ## HITS:1 COG:YPO1226 KEGG:ns NR:ns ## COG: YPO1226 COG2211 # Protein_GI_number: 16121514 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Yersinia pestis # 15 517 1 495 498 412 42.0 1e-115 MPLQNRRKIGLMNYLAYGSGDFLGAGTTALTAAWLLYFYTTFCGLSPIEATFIFAMARVL DAVVSPLMGFLTDNFGSTRLGRRFGRRKFFILLGIPLVFSYSLMWIGEMHYWYYLLTYLF FDVVYSMILVPYETLVPEMTDDFKQKTKFSGARISMAQLSAILAAFLPGFLLKYLGKDNA ISFFYASLVFSIICAVVLTLVYFFTWERPREDMSEAQLKAEREKQQLTLLQSLKRLNVEL TSTLRIRIFRQHLGMYLGGYIAQDVFNAVFTYYVVFVLMQSATVASSLMGTMAIMQFIAV IGMIPLCIKFGPAPSYRLVVVLFGLSALSYGVLYYAGMNDAMSLLLLISAVAGLGRGGIN YVPWNTYTYIADVDEVITGQRREGIFAGIMTLTRKASQACAVMLVGIVMEFSGFVSGQSV QAPAVSHTILMILSVGTVCVLCIGFYISLRFKLNLHTHSILREETVKMRDAGHIVPEQIT PEAKATVEMLAGMPYESLWGNNNIGYLNRDKPAPKPLHILKNA >gi|316918893|gb|ADCU01000013.1| GENE 103 127551 - 128453 722 300 aa, chain + ## HITS:1 COG:BH0025 KEGG:ns NR:ns ## COG: BH0025 COG2421 # Protein_GI_number: 15612588 # Func_class: C Energy production and conversion # Function: Predicted acetamidase/formamidase # Organism: Bacillus halodurans # 1 287 1 286 300 273 49.0 2e-73 MEKILRTQVIYAMSRHNLPVAHVPSGSDVCFETCDCFSDQIASEQAVFNELDWKHINPAT GPIFVENAQPGDVLRVEIKSIILHSQQAVMVTAPGLGVIGDELVQPQIRTVPIEDGYAHL PGGVRWPLKPMIGVIGVAPSGDEISCGTPDAHGGNMDCKIITEGCTLWLPVNVEGALFAL GDLHAAMGDGEVSVCGLEVPGEVVVNLSVIKGHPLPTPMMSTADALYTLASAATLDEAAQ IATRNMAHFVAEHTHISLADAINLLSITGDLQICQVVDPLKTCRFALPRAVANQLKLTLE >gi|316918893|gb|ADCU01000013.1| GENE 104 128462 - 129805 1235 447 aa, chain + ## HITS:1 COG:PA5510 KEGG:ns NR:ns ## COG: PA5510 COG0531 # Protein_GI_number: 15600703 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Pseudomonas aeruginosa # 1 434 1 435 449 471 59.0 1e-132 MSVEQFGYKQELHRTLTLKDLIIYGMIFMVPIAPFGVFGYVWEGSQGMVALAYLIGMLAM FFTAMSYWSMSKAFPVSGSVYAYAQRGIHETVGFFAGWLILLDYILVPSLLYIVSAAALG PILPGIPAWVWIVAFIVINSMINLVGIQFTAKANRYILIAEIIILAIFIVVGLVALYGGE GAGRLTLAPLYNADKFSLPLVMGAVSIAVLSFLGFDGISTLSEESKGGADAVGMASLGAL LLVGGLFILQTWIAADLASGSTFNSLDTAFYDTANLAGGTWLKQATIWATALSWGIANAL VAQAAISRILFAMARDRKLPRILAKVHPRFKTPYVSTLLVAVISLISGLYFNGSIDNLSR LVNFGALVGFFILHLSVINHYIIRQKSTQWVRHLLLPVVGLLIIGFVIYEMDIEAKVLGL SWLVIGIVYYLVLRVVLKRSVELELEG >gi|316918893|gb|ADCU01000013.1| GENE 105 130126 - 131994 2072 622 aa, chain - ## HITS:1 COG:YPO3119 KEGG:ns NR:ns ## COG: YPO3119 COG0326 # Protein_GI_number: 16123284 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Yersinia pestis # 1 622 3 624 624 1039 85.0 0 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGD GNLHVRISADKENRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESMGSDQAKDSQLI GQFGVGFYSAFIVADKVTVRTRSAGVNADQAVFWESEGEGDYTIADIEKVERGTEITLHL REGEDEFLDDWRLRNIISKYSDHIALPVEILTTEGEDGEQKWEKINKAQALWTRTKSEVT DEEYKEFYKHIAHDFTDPVTWSHNRVEGKQEYTSLLYIPAQAPWDLFNRDHKHGLKLYVQ RVFIMDDAEQFMPNYLRFVRGLIDSNDLPLNVSREILQDSRVTQSLRAALTKRVLQMLDK LAKDDAEKYQKFWQQFGLVLKEGPAEDGGNAEAIAKLLRFASTHNDSAIQNVSLTDYISR MVEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMSYLTEFDGKPFQS VSKKDESLDKLADEETSEQKEAEKALEPFVDRVKKLLGDRVKDVRLTHRLTETPAVVTTD ADEMTTQMAKLFAAAGQAAPEIKYIFELNPDHALVKRAADEQDEARFGEWIELLLDQSLL AERGSLEDPNLFIKRVNDLLMA >gi|316918893|gb|ADCU01000013.1| GENE 106 132170 - 132775 538 201 aa, chain - ## HITS:1 COG:ECs0525 KEGG:ns NR:ns ## COG: ECs0525 COG0353 # Protein_GI_number: 15829779 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 350 86.0 1e-96 MQTSPLLESLMEALRCLPGVGPKSAQRMAFHMLQRDRSGGMRLAQALTRAMSEIGHCEDC RTFTEQDICTICSNSRRKENGQICVVESPADIHAIEQTGQFSGRYFVLMGHLSPLDGIGP QDIGLDRLEERLGQEPLTEVILATNPTVEGEATANYIAEMCSAHGVLATRIAHGVPVGGE LEMVDGTTLSHSLAGRNPVRF >gi|316918893|gb|ADCU01000013.1| GENE 107 132775 - 133104 231 109 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 5 109 9 114 114 93 43 9e-18 MFGKGGLGNLMKQAQQMQDKMAKVQEEIAQLEVTGESGAGLVKVTINGAHNCRRIEIDPS LMEDDKEMLEDLIAAAFNDAARRIEETQKEKMASVSSGMQLPPGFKMPF >gi|316918893|gb|ADCU01000013.1| GENE 108 133155 - 135158 1656 667 aa, chain - ## HITS:1 COG:YPO3122 KEGG:ns NR:ns ## COG: YPO3122 COG2812 # Protein_GI_number: 16123287 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Yersinia pestis # 1 667 1 658 658 882 75.0 0 MSYQVLARKWRPQTFSDVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK GLNCETGITSTPCGVCDNCREIEQGRFVDLLEIDAASRTKVEDTRDLLDNVQYAPARGRF KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLKALDV EQIRTQLEKISTAEGFTAEPRALQLLARAAEGSMRDALSLTDQAIAMGLGQITAETVGQM LGTLDDEQPLAIIEALVDADGEKVMALVEQAASRGVDWENLLIETLTLLHRIAMLQLLPN ALDSHYISVEQRLRELARTLPPSDLQLFYQVLLTGRKELTYAPDRRMGVEMTLLRALAFH PKEVIAEPVAAPQTALPSMPVHSTASAAPSSYMPTQHSAPDMQGMPPAGQFQPQEAAPVR STAKPTGLSDATAQLLQARSQLRQKTGGGTDPKKNEPAAPVTARPASSALERLASVTERS QQRQAAAAETKPLKKEAYRWKAQTKAVEAKREEIATPKALRTALEYEKTPELAAKLAEES LTRDEWAAELNQLRLPKLVQQLALNAFREPAEEGKVLLHLRSSQRHLNSASAQQTLSQAL SEHYGRPVELTIIEDDNPERLTPLEWRQTIYEEKLAQARQSIAADSNIQTLRRFFDAELD EESIRPV >gi|316918893|gb|ADCU01000013.1| GENE 109 135302 - 135577 117 91 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWRQTEQSQLLISLAAFEGDIFGYCNSSFMLIPNYFQTNKREVAAPAKRKSLYHQDDKMQ KPRIREAWYLFLVEGLSAEINGRRSLPDYNS >gi|316918893|gb|ADCU01000013.1| GENE 110 135540 - 136091 715 183 aa, chain - ## HITS:1 COG:STM0483 KEGG:ns NR:ns ## COG: STM0483 COG0503 # Protein_GI_number: 16763863 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Salmonella typhimurium LT2 # 1 183 1 183 183 305 85.0 4e-83 MTATAQQIEFLRESIKTIPDYPKPGILFRDVTSMLEDPKAYALSIELLVERYRHAGVTKV VGTEARGFLFGAPVALALGVGFVPVRKPGKLPRATLSESYELEYGTDTLEIHQDAIQPGD NVLVVDDLLATGGTIEATVKLIRRLGGVVTDAAFIIDLPDLGGEARLTAQGINCYSLVDF SGH >gi|316918893|gb|ADCU01000013.1| GENE 111 136279 - 136773 252 164 aa, chain - ## HITS:1 COG:ECs0521 KEGG:ns NR:ns ## COG: ECs0521 COG2832 # Protein_GI_number: 15829775 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 39 162 1 124 125 161 67.0 6e-40 MIALVELIAGAGIANDFKYAARVTSNGTGAAGDRARYTMQRLLLIILGWTAFALACLGAV LPLLPTTPFLLVAAWCFSRSSPRFHRWLLYNSWFGGYLRHWQEHRGLPSGAKPKAIVFII LTFALSLWLVNLWWVRILLLVILTGLLFFMWRLPVIDAEQQKTP >gi|316918893|gb|ADCU01000013.1| GENE 112 136789 - 137331 480 180 aa, chain + ## HITS:1 COG:YPO3127 KEGG:ns NR:ns ## COG: YPO3127 COG3923 # Protein_GI_number: 16123289 # Func_class: L Replication, recombination and repair # Function: Primosomal replication protein N'' # Organism: Yersinia pestis # 1 179 1 178 178 108 46.0 6e-24 MSSQQLLQILDQRITQLELALKNSSYMPTYQPRFDRALFACTETGLKDYLQELRRNFSRL SDEVARNHPQQVSFLAERVVVQIEALQRELATQQLRRQDRKKRRSPLSILQQQLVETRGY EQRLNDMLYERESQLGQCQTLVQQQGIQQELVALEARLNRCRQALKKIEHQIEQLELGFS >gi|316918893|gb|ADCU01000013.1| GENE 113 137431 - 137679 369 82 aa, chain + ## HITS:1 COG:YPO1181 KEGG:ns NR:ns ## COG: YPO1181 COG2261 # Protein_GI_number: 16121476 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 82 26 107 107 88 69.0 2e-18 MGIISWIILGLIVGILAKWFMPGKDGGGFFMTVILGIAGALVGGYISAFFGLGTVTGFNI GSLIISILGAMLLLFIYRKLKN >gi|316918893|gb|ADCU01000013.1| GENE 114 137689 - 137868 191 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLENAAAEVQLAVDLIYLLESNDLGPEVVLAALEIVKSDYESKLALKHSQAVFPLSNS >gi|316918893|gb|ADCU01000013.1| GENE 115 137924 - 141289 2827 1121 aa, chain - ## HITS:1 COG:YPO3129 KEGG:ns NR:ns ## COG: YPO3129 COG3264 # Protein_GI_number: 16123291 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Yersinia pestis # 8 1115 10 1123 1139 1337 63.0 0 MMAGRIKFRPAQFAWRPQFYLVALLFSILALLTPSYALALNGDILTRAEVQSQLDALNKQ KTLSPGEKLAQQDLNRTLEFLDGIDRLKQENQQLKQQVQQAPVKLNQALNGLDSIRQADS EAITRTSLSTLTLRQLENKMGSTLDALQSAQEDLANFNSQLISLQTQPERAQSSMMETSQ QIQQIRNALSDPSNMRTTQQNMLNTQMTMLNMSLDYQRQSLSANTALQDSLQKQRDYANA RINQLERMVQLVREVENGKRLTLSEKTAQEAQNPDDATQDIQHDPIIGQELDINRQLSKR LIEATEGVNALVQENIRIKNWLDRSLQAERNLKEQITVLKGSLLLSRILYQQQQNLPTEK LTNNVAEQIADLRLEQFDINEKRDALYQGNDYVTQLISQSKEKPSDDVVSALEDIVDARR ELLDQLNKQLGSQLTLAISLQINQQQLLSVNEYLQHTLTQQIFWVSSNKPMNLNWFIDLP SALKGQSHSLHFDLKPGALAEGALNSMFVLVPLLVLFGLFRWRYHKIDELLEKLGNEVGQ LKRDTQLHTPKAIGLTMLKGLPGTLLILAFGFWCYRSDISINNFLWSLSLQFAMFWMFIT TTYRLLEPGGVSEKHFNLSPLLCAHYRRVTRRVGVVLIPLIFWCVLGEKAPLRLSEDVIG QVVVLITLGLISAFVFPICRDAWREKNSHTVRLIMVTLLALTPLVLMVLTAFGYLYTALS LGIRWLDSLYLMIFWTVIYSSAIRGLSVAARRLAYRRALARRQQNVAREGAEGLEPVEEP PLAIDQINSQSLRLTTMVLFLIFGTVLYWIWSDLVTVISYLDSITLWHYSSGSGASQSLQ AVTLGSVLFALLSVVIAYVLTRNLPGLLEVLVLSRLQMRQGSSYAITTVLTYLIIVIGTL IFFSSLGVSWDKLQFLAAGLSVGLGFGLQEIFGNFISGLIILFERPIRIGDTITIGTFSG TVSRIRIRATTITDFDRKEVIIPNKAFVTERLINWSLSDTTTRVLIKVGVAYGSDLDKVK KVLLQAAKENPRVMTDPEPQVFFLAFGASTLDHELRLYVRELRDRSYTVDELNRRIDQLC RENDINIAFNQLEVYLHNQEGKEVQVVKKDLDGSAGGESLA >gi|316918893|gb|ADCU01000013.1| GENE 116 141467 - 141820 369 117 aa, chain - ## HITS:1 COG:ECs1724 KEGG:ns NR:ns ## COG: ECs1724 COG1553 # Protein_GI_number: 15830978 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Escherichia coli O157:H7 # 1 117 1 117 117 189 79.0 1e-48 MQKIVLIANGAGYGQESLFNALRLAIAMKEQQGDIELKVFLMSDAVTSGLAGQKPHEGYN LQQMIEILTAQQVPFKLCKTCADGRGISALPLIDGVEIGTLVELAQWTLAADKVLTF >gi|316918893|gb|ADCU01000013.1| GENE 117 141820 - 142524 357 234 aa, chain - ## HITS:1 COG:YPO3131 KEGG:ns NR:ns ## COG: YPO3131 COG1309 # Protein_GI_number: 16123293 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 205 1 205 218 301 71.0 9e-82 MARKTKEQAQETRLQILEAAVVEFSARGVSATSLTDIANAAGVTRGAIYWHFKNKVDLFN EVWDLTESKVSDLEIEYQTKYPDNPLRILREILIYILVATVDDPRRKALMEIIFHKCEFV GEMRSLRDIRRILYLENFERIENVLRNCIECQQLPAELNTRRTAIMMRSYITGIMESWLF MPESFDLKAEASLMVDSFIDMIKYSEYLLKGAVSMPFEAPACAVAMTPLNKRKT >gi|316918893|gb|ADCU01000013.1| GENE 118 142664 - 143854 1226 396 aa, chain + ## HITS:1 COG:YPO3132 KEGG:ns NR:ns ## COG: YPO3132 COG0845 # Protein_GI_number: 16123294 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Yersinia pestis # 1 396 1 395 395 520 72.0 1e-147 MNKNRGLTPLAAVLMLSGSLLLTGCNDGNEQKGQQSAPEVGVVTLKAEPLNITTELPGRT SAYRIAEVRPQVGGIILKRNFVEGSDIQAGSSLYQIDPATYQAAYDSARGDLAKAEAAAN IARLTVNRYKTLVGTKYISQQEYDTAVADARQADAAVTAAKAAVETARINLAYTKVTSPI NGRIGKSSVTEGALVTSNQANALATVQQLDPIYVDVTQSSNDFLRLKEELANGTLEQEGG KAKVELILENGQKYPQVGALEFSDVTVDESTGSITIRAVFPNPKGDLLPGMFVRARLDEG IKNNALLVPQQGVTRNPRGEATVMVVGADNKVENRTVTAAQAIGDKWLVTAGLKSGDKVI VTGLQKIRPGVQVKVEEASAGNASTKDAAASEPKKS >gi|316918893|gb|ADCU01000013.1| GENE 119 143900 - 147052 3019 1050 aa, chain + ## HITS:1 COG:YPO3133 KEGG:ns NR:ns ## COG: YPO3133 COG0841 # Protein_GI_number: 16123295 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Yersinia pestis # 1 1050 1 1050 1050 1720 83.0 0 MAKFFIDRPIFAWVIAIIIMLAGALAIMKLPVAQYPTIAPPAVSISAVYPGADAQTVQDT VTQIIEQNMNGIDNLMYMSSTSDSSGSVSITLTFQSGTDPDIAQVQVQNKLQLATPLLPQ EVQQQGISVEKSSSSFLMVAGFISEDGSMSQDDIADYVASNIKDPISRSEGIGDVTLFGA QYAMRIWLDPNKLNNYQMTPLDVINQIKIQNNQIAAGQLGGAPPVPGQQLNASIIAQTRL QTPEEFGKILMKVQADGSRVLLRDVAKIELGGENYNVIARFNGKPAAGLGIKLATGANAL DAAEGVKKELAKLEPFFPASLKVVYPYDTTPFVKISINEVVKTLLEAIVLVFLVMYLFLQ NIRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM AEEGLPPKEATRKSMEQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMVL SVLVAMILTPALCATMLKPVEKGGHGKTTGFFGWFNNMFEKSTEHYTNSVAGILRGTGRY LLIYLVIVVGMGLLFVRMPTSFLPDEDQGIALTMVQLPAGATQERTNKVLAEVTDYFLDK EKANVQSVFTVSGFGFSGQGQNNGLAFVSLKPWDERSGADNKVPAIIARATGAFSKIKDG LVFPFNLPAIIELGTATGFDFELIDQAGLGHEKLTEARNQLLGMAAEHPDTVVRVRPNGL EDTPQFKIIVDQEKAQALGVAISDINQTLSTALGGTYVNDFIDRGRVKKVYVQADAPYRM LPNDINNYYVRGDAGQMVPFSAFSSSKWEYGSPRLERYNGLPSMEILGEAAPGKSTGEAM NLMEELVTKLPTGIGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSV MLVVPLGVIGALLAATMRGMNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLI EATLESVRMRLRPILMTSLAFMLGVLPLVISSGAGSGAQNAVGTGVMGGMISATILAIFF VPMFFVVVRRRFNRSGEDIEHSHAVDHQVK >gi|316918893|gb|ADCU01000013.1| GENE 120 147213 - 147485 355 90 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|51595332|ref|YP_069523.1| 50S ribosomal protein L31 type B [Yersinia pseudotuberculosis IP 32953] # 1 84 1 84 86 141 77 4e-32 MKPNIHPHYRTVVFHDTTADAYYKIGSTIHSEREIEMDGVKYPYVTLDVSSASHAYYTGK QKEFSKEGSAAKFQQRFGHFMTKKKSAEEN >gi|316918893|gb|ADCU01000013.1| GENE 121 147485 - 147625 222 46 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90019301|gb|ABD84301.1| putative ribosomal protein L36-like [Yersinia sp. MH-1] # 1 46 1 46 47 90 89 1e-16 MQVLSSLRSAKQRHPDCKIVKRHGRIFVICKSNPRFKAVQGGKKKR >gi|316918893|gb|ADCU01000013.1| GENE 122 148142 - 148516 253 124 aa, chain + ## HITS:1 COG:no KEGG:ETAE_1009 NR:ns ## KEGG: ETAE_1009 # Name: mrcA1 # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 121 1 121 122 156 64.0 2e-37 MDEYTSYQHDITELKYLCNMLYNQGMDVLSDSHHGWVNDPTAVDNLQLNELNEHIANFGL TFKIKYPNASELTEILDEYLDETYSLFSNYSINEPELKKWLKAKGRILRYLAGEKTTSAL NFNL >gi|316918893|gb|ADCU01000013.1| GENE 123 148530 - 148733 309 67 aa, chain + ## HITS:1 COG:no KEGG:ETAE_1008 NR:ns ## KEGG: ETAE_1008 # Name: not_defined # Def: hemolysin expression modulating family protein # Organism: E.tarda # Pathway: not_defined # 1 67 1 67 67 108 95.0 4e-23 MTKIDYLMRLRKCTTLDTLERVIEKNKYELSDDELETFYSAADHRLAELTMNKLYDKIPA EVWKYVR >gi|316918893|gb|ADCU01000013.1| GENE 124 149690 - 150022 218 110 aa, chain + ## HITS:1 COG:YPO3139 KEGG:ns NR:ns ## COG: YPO3139 COG3695 # Protein_GI_number: 16123301 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Yersinia pestis # 4 105 76 178 181 129 60.0 2e-30 MPNDTPPEDNFRQRVLMTIHAVPYGKVATYGQIARLAGSSRAARQVGGILRKLPKGSTLP WYRVVNRTGNISLVGSDYIRQRTALQDEGVTFNANGVIDLALYGWDPSKP >gi|316918893|gb|ADCU01000013.1| GENE 125 150074 - 150592 493 172 aa, chain - ## HITS:1 COG:YPO3140 KEGG:ns NR:ns ## COG: YPO3140 COG3126 # Protein_GI_number: 16123302 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 3 153 9 158 173 146 53.0 2e-35 MKLWKIVGGVLMTATVAGCSSNAADVPTPAPGNQITADASQISGPAVRGSVNLRQRIALP PNAEVTVTLADVSLADAPARVLSQKVFRTDGKQPPYNFVLPYNPQDIQPNQRINLSAAIK IDGRLVFITDTLNEVVNNNAGTQKDLVLVPISADGAATVLSEKPKSVGASPL >gi|316918893|gb|ADCU01000013.1| GENE 126 150905 - 151765 726 286 aa, chain + ## HITS:1 COG:YPO3141 KEGG:ns NR:ns ## COG: YPO3141 COG1946 # Protein_GI_number: 16123303 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Yersinia pestis # 1 283 1 283 286 468 83.0 1e-132 MSQALKNLLDLLDLEKIEEGIYRGQSEDLGLRQVFGGQVVGQALYAAKQTVPLERNIHSF HSYFLRPGDSSQPIIYDVENLRDGNSFSARRVKAVQHGKPIFYMTASFQTAEEGFEHQNV MPEVPAPESLKSESEIANSMAHLIPESVREKFTCEKPLEMRPVTFHNPLMGTVEEPIRNV WFKANGEMPDDPRIHQYLLGYASDFNFLPTALQPHGKGFLEPGMQVATIDHSMWFHRPFR LDDWLLYAVESTSASGARGFVRGQFYNRAGELIASTVQEGVIRQRS >gi|316918893|gb|ADCU01000013.1| GENE 127 151829 - 153118 1269 429 aa, chain - ## HITS:1 COG:YPO3142 KEGG:ns NR:ns ## COG: YPO3142 COG0004 # Protein_GI_number: 16123304 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Yersinia pestis # 1 429 3 431 431 607 83.0 1e-173 MKIRLSTLGLGSASLLPGVAMAAAPAVADKADNAFMMICTALVLFMTIPGIGLFYGGLLR SKNVLSLMTQVMVTFAAICVLWVVYGYSLAFGSGNAIFGNFDEVMLKGIGLTDLTGSFYK MIHVAFQGSFACITVGLIVGSFAERIRFSAVLIFAVLWFTFSYIPMAHMVWGGGYLATDG ALDFAGGTVVHINAAIAGLVGAYLLGKRAGFGKEAFKPHNLPMVFMGTAVLYIGWFGFNA GSASAANEIAALAFVNTVVATAGAILSWVLVEWMTRGKPSLLGACSGCIAGLVAVTPAAG TVGVGGALLLGLIAGVAGLWGVVMLKRWLKVDDTCDVFGVHGVCGIVGCLATGILTATSL GGTGYAEGVTMGHQFGVQALSVAICIVWSGVAALIAFKIADVCVGLRVPEDQEREGLDVN SHGENAYNQ >gi|316918893|gb|ADCU01000013.1| GENE 128 153152 - 153490 452 112 aa, chain - ## HITS:1 COG:YPO3143 KEGG:ns NR:ns ## COG: YPO3143 COG0347 # Protein_GI_number: 16123305 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Yersinia pestis # 1 112 1 112 112 194 97.0 3e-50 MKLVTVVIKPFKLEDVREALSSVGIQGLTVTEVKGFGRQKGHAELYRGAEYNVNFLPKVK IDVAIADDQLDEVIDVISKSAYTGKIGDGKIFVAELQRVIRIRTGETDEAAL >gi|316918893|gb|ADCU01000013.1| GENE 129 153836 - 155614 203 592 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 341 561 5 222 223 82 26 2e-14 MRNIKQLWPTLKRLLAYGGPYKKPLAIAVVMLWVAAAAEVCGPIIISYFIDNVVAKGDLR LGLVVGLAVLYLLLEFTAAGLQYAQALLFNRAAVGVVQQLRTDVMDAALRQPLSAFDNQP VGQLISRVTNDTEVIKDLYVTVVATVLKSAALIGAMLVAMFTLDWRMALISICIFPAVFV VMAVYQHYSTPVVRRVRSYLADINDGFNEVINGMGVIQQFRQQARFGEKMGAVSRSHYQA RMQTLRLEGFLLRPLLSLFSAMILCGLLMMFGFSAEGSIGVGVLYAFINYLSRLNEPLIE LTSQQSMMQQAVVAGERIFELMDDAQQNYGGDIQPLQSGRVDINNVTFAYREGRPVLQDI NLHIASRGFVALVGHTGSGKSTLANLLMGYYPVSGGEICIDGRPIPTLSHQVLREGVAMV QQDPVVMAESVMNNVTLGRDISEAQVWKALEDVQLAPLVRTWPNGIQTQLGEQGNNLSVG QKQLLAMARVLVQAPQILILDEATANIDSGTEQAIQKALNVIRQQTTLIVIAHRFSTIVD ADSILVLHRGYAVEQGSHHELLAKQGRYYQMHQLQLVGEALAAGLSQEPPTI >gi|316918893|gb|ADCU01000013.1| GENE 130 155607 - 157379 174 590 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 351 557 16 226 245 71 26 4e-11 MRLFAQLGWYFRREWRRYLGAVLLLVVIAILQLAPPRIVGIVIDGVSKQHMSGTTIMFWI AILLAIAVVVYLLRYVWRVLLFGASYLLAVELREKYYRQLSNQAPSFYQRHRTGDLIARA TNDVDRVVFAAGEGVLTLVDSLVMGLAVLFVMSTQISWELTLLSLIPMPIMAIVIKHQGE QLHSRFKSAQAAFSMLNDQAQESLTSIRMIKSFGLENHQSKRFAKVAAEAGSRNMHVAKV DARFNPIIFIAIGCANLLAIGGGGVMVIHGHLTLGQLTSFVMYLGLMIWPMLALAWMFNI VERGSAAYSRIRSMLSEQSTVTDGDKTLPEGRGELIVNVESFAYSEDTHPVLHNVNFNLA PGQMLGLCGPTGSGKSALLSLIQRQFDPDRGEISFHGISLRELRLDEWRTRLAVVSQTPF LFSDSVAMNIALGKPDATQEDIERVAKLASVHEDILHLPEGYQTEVGERGVMLSGGQKQR ISIARALLLNAEILILDDALSAVDGRTEYQILHNLREWGQNRTVIISAHRLSALTEASEI LVLQQGVVAQRGQHTELSQQSGWYRDMHRFQQIEAQLDEPDTQTQEPDNA >gi|316918893|gb|ADCU01000013.1| GENE 131 157622 - 158083 381 153 aa, chain - ## HITS:1 COG:ybaO KEGG:ns NR:ns ## COG: ybaO COG1522 # Protein_GI_number: 16128432 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 151 30 180 181 249 79.0 1e-66 MLDKTDRKLLALLQRDCTQSLQVLADAVNLTSTPCWKRLKRLEDDGYIVGRVALLDKDKL GLGLTAFVMIKTQHHSSEWYHHFVQQVEHMPEILAFYRMAGEYDYLMQVQVADMKSYDAF YKRLVNAVKGLSDVTSSFAMEQIKSTTILPVGE >gi|316918893|gb|ADCU01000013.1| GENE 132 158143 - 158280 57 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCIRGTLEISFYLANSVLYPSVVHDIGLCESVRTYALRLSAFAEK >gi|316918893|gb|ADCU01000013.1| GENE 133 158209 - 159249 850 346 aa, chain + ## HITS:1 COG:YPO3147 KEGG:ns NR:ns ## COG: YPO3147 COG0031 # Protein_GI_number: 16123309 # Func_class: E Amino acid transport and metabolism # Function: Cysteine synthase # Organism: Yersinia pestis # 1 346 1 346 346 612 82.0 1e-175 MNNTWVKHAISEIEADFQRSADTHLIRLNLPTFPGIYLYLKDESTHPTGSLKHRLARSLF LYGLCNGWIKEGTTVIEASSGSTAVSEAYFARLLNLPFIAVMPSCTARKKVEQIEFYGGR CHFVDHASQIYAVSEQLAKELNGHYMDQFTNAERATDWRGNNNIADSIFRQMEREPYPVP TYIVMSAGTGGTSATLGRYIRYQGHPTHLMVVDPENSVFMDSYLQKDRTITGTCGSKIEG IGRPRAEPSFIPEAIDSMMRVPDAASIATIHWLQKVLGRKVGASTGTNMWGALDLARQMR ERGEKGSIVTLLCDSGERYLETYYDAGWVNANIGDLSQYSQQLESL >gi|316918893|gb|ADCU01000013.1| GENE 134 159327 - 160148 489 273 aa, chain - ## HITS:1 COG:STM0457 KEGG:ns NR:ns ## COG: STM0457 COG0561 # Protein_GI_number: 16763838 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Salmonella typhimurium LT2 # 1 273 1 272 272 332 60.0 6e-91 MVRLAAFDMDGTLLMPDHQVGAETLDALHRLLEQNVALTFATGRHFLEVRTIARRLGLHG YMITGNGTRVHDCEGNNLFAQDLSPEIAQEVLHSHWGTDASMHVFRDDGWLTTNELPELL TPHAENGFGYKIMPLRSLPAFGISKICFCGDHDALIQLQARLLQHFGNAVDFCFSAYDCL EVLPKGTNKGSALSHLCNHLDIDLADCMAFGDAMNDREMLGMVGKGYIMGNALPQLKASL PHLEIIGHCQHQAVAKQLNTWLSSPKKPHHSPE >gi|316918893|gb|ADCU01000013.1| GENE 135 160252 - 161952 924 566 aa, chain + ## HITS:1 COG:YPO3149 KEGG:ns NR:ns ## COG: YPO3149 COG4533 # Protein_GI_number: 16123311 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Yersinia pestis # 1 566 1 567 567 592 53.0 1e-169 MRLLQRLSQYQRLNQFAGDEPISTTVAELASVFCCSERHVRTLLTQLQALKWLEWHATAG RGKRARLHCLIPEQQLRATLMQQLLKIGDHQNALKLAERDPSHLNELLMPHLGGQWDSDL PTLRIPYYRTLEPIVPLTLTGRAEQHLAHTIHAGLTRFVTGNPIPQPDLAHHWQTSSDGL RWQFLLRSDLRWHNGQPISAEQLVQTLEHLRSHPRCGSFLDSIEQISLPHALCLRFTLKR PDYWLAHRLADMLCLLPHPDFAEIGAGPFRQISSSDMLIRLEQHSSYHLHRPYLHAIEYW ITSSPDQLSVAPSCQHPVKITIGQYEELDSVRPVQRSTSVGFCYIAINQKRGKLTEIQRR YLTTLIREENTLNQLPIENGLIARSSEMLSGWPLPEPTTEPVSLPPKLTLLYHPPAELTA LSERLQERLAQAGCELEVRFHDGKRWESREQFEDVDIVLGDRLIGESPEMALENWLRVDI LWQAILSHTEQLQCRAVLDDVQLISDETLRHYALRDYYAHLMQQGIIMPLFNYQYQISAP PRVEGVILTAYGWFDFSQAWVPAPTD >gi|316918893|gb|ADCU01000013.1| GENE 136 162077 - 162763 634 228 aa, chain + ## HITS:1 COG:ECs0498 KEGG:ns NR:ns ## COG: ECs0498 COG0603 # Protein_GI_number: 15829752 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Escherichia coli O157:H7 # 1 228 1 230 231 404 83.0 1e-113 MKRAVVVFSGGQDSTTCLIQALDQYDEVHCITFDYGQRHRAEIDVARDLAIKLGASAHKV LDVGLLNELAISSLTRDNIPVPTESEDGIPNTFVPGRNILFLTLAAIYAYQVQAEAVITG VCETDFSGYPDCRDEFVKALNKAITLGMARDVRFETPLMWLNKAETWALADHYQKLDLVR RETLTCYNGIQGDGCGECAACHLRSHGLNEYLANQAVVSASLKEKTGL >gi|316918893|gb|ADCU01000013.1| GENE 137 162815 - 163225 380 136 aa, chain - ## HITS:1 COG:STM0454 KEGG:ns NR:ns ## COG: STM0454 COG0824 # Protein_GI_number: 16763835 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Salmonella typhimurium LT2 # 5 132 3 130 132 174 67.0 3e-44 MSNATIIKVRGYHLDVYQHVNNARYLEFLEEARWQWLEDHGAFEWMMKEAIAFMVVNLNI NYRRGAVLNDELIVESKLHQLNGRSGVLNQTITRTSDNEIIIDAALTFVCTDLKTQKALP LEGALRDRLLELSGNK >gi|316918893|gb|ADCU01000013.1| GENE 138 163382 - 163762 344 126 aa, chain - ## HITS:1 COG:STM0453 KEGG:ns NR:ns ## COG: STM0453 COG1555 # Protein_GI_number: 16763834 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Salmonella typhimurium LT2 # 15 126 8 124 124 77 43.0 8e-15 MKKQSMMVSLFSVWMLLTGALLLPSQAQSATTNRPVSPSVEQAPKAADPQPATKESSSGI TGTSVNINTASAEQMATVLNGVGLKKAQAIVEYREKNGAFTQIEQLEEVKGIGASLIERN RDRLKL >gi|316918893|gb|ADCU01000013.1| GENE 139 163903 - 165786 2222 627 aa, chain - ## HITS:1 COG:YPO3153 KEGG:ns NR:ns ## COG: YPO3153 COG0760 # Protein_GI_number: 16123315 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Yersinia pestis # 1 625 1 625 628 774 66.0 0 MMDNLRAAANHVVLKIILGLIIVSFVLTGVGGYLTGGSGDYAAKVDGQEISRGQLEQAVQ SERSRLQQQLGDQFSVLAGNEGYMKELRKQALNRLIDDMLLDQYAKKLGLGISDEQVKEA IWAMPYFQTNNQFDNAKYLSIIANMGLTPDNYAQLVRQQLTSQQLIQAYTATGFTLPVEV EAMAALTMQQRDVRLATIDIKALEKDQKVTDEELKAYYEQNKNSFIAPEEVKVSYIEMDA AAIQDKVTVSDDEIAAYYDQHKSSYTQPERKDYSVIQVKTEADAKAVLDELNSGADFAKV AAEKSTDIISRKKGGELGWLEPGTTPDEILGAKLTTKGQLSGAVKSSVGYLVVRLNDIKP EQVKPLAEVRADIEAQVKQQKALDAFFALQQKVSDSATSDNESLAGAEEAAGVKATETGW FTRDNVPAAINFKPVTQAIFEGSLFGENGAPGSNSDVISVEGDRAFVIRISAHKPEAVKP MDQVKEQITEMVKRQKAIQQARTEGDKLLTALQAGKGEEALKAAGISFGAEQTLTRASED RQLADTVFALAQPKDNKPVYGLAQDRQDNIVLIQLDAVKSGHLSNEELKAFSSQMLTGST GITFDSLMDNLRANAKIKLGSAASEMQ >gi|316918893|gb|ADCU01000013.1| GENE 140 166105 - 166377 391 90 aa, chain - ## HITS:1 COG:YPO3154 KEGG:ns NR:ns ## COG: YPO3154 COG0776 # Protein_GI_number: 16123316 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Yersinia pestis # 1 90 1 90 90 129 91.0 1e-30 MNKSQLVDKIAEGADISKAAAGRALDAIIASVTESLQSGDSVALVGFGTFDVRERSARTG RNPQTGKEISIPAAKVPGFRAGKALKDAVN >gi|316918893|gb|ADCU01000013.1| GENE 141 166596 - 168950 2489 784 aa, chain - ## HITS:1 COG:YPO3155 KEGG:ns NR:ns ## COG: YPO3155 COG0466 # Protein_GI_number: 16123317 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Yersinia pestis # 1 784 1 784 784 1431 94.0 0 MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKILLVAQKEAST DEPGVNDLFSVGTVASILQMLKLPDGTVKVLVEGLQRARITTLSDSGEHFAAQAEYLEIP EMDEREQEVLVRTAINQFEGYIKLNKKIPPEVLTSLNSIDDAAKLADTIAAHMPLKLNDK QAVLEMSDVTERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKE LGEMDDTPDEFEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMIQ VPWNARSKVKKDLNKAQEILDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGV GKTSLGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLF LLDEIDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSNSMNIPAP LLDRMEVIRLSGYTEDEKLNIAKQHLLPKQLERNALKKGELTVDDSAISGIIRYYTREAG VRSLEREISKLCRKAVKNLLMDKSVKHIEINGDNLKDFLGVQRYDYGRADSENRVGQVTG LAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYE KRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLK EKLLAAHRGGIKTVLIPDENKRDLEEIPDNVLADLDIHPVKRIDEVLALALQNSPFGMEV VTAK >gi|316918893|gb|ADCU01000013.1| GENE 142 168925 - 169140 78 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRSERSGFIELSLSLASARLWESYNPFYVVASPSLYLSIWGCLPGIQRKQQQKKKWEIKS PILLITHQFTG >gi|316918893|gb|ADCU01000013.1| GENE 143 169141 - 170412 1590 423 aa, chain - ## HITS:1 COG:ECs0492 KEGG:ns NR:ns ## COG: ECs0492 COG1219 # Protein_GI_number: 15829746 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease Clp, ATPase subunit # Organism: Escherichia coli O157:H7 # 1 423 1 424 424 784 94.0 0 MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRE RNALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGP TGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGI VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGGRKHPQQEFLQVDT SKILFICGGAFAGLDKVIGQRVNTGTGIGFGATVKALSEKATEGELLAQAEPEDLIKFGL IPEFIGRLPVVATLRELSEDALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALTAIAK KAMARKTGARGLRSIVEAALLETMYDLPSMENVEKVVVDENVIEGQAEPMLIYGKPEAQA SGE >gi|316918893|gb|ADCU01000013.1| GENE 144 170696 - 171316 524 206 aa, chain - ## HITS:1 COG:YPO3157 KEGG:ns NR:ns ## COG: YPO3157 COG0740 # Protein_GI_number: 16123319 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Yersinia pestis # 1 205 1 206 207 385 93.0 1e-107 MSYSGERDLAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQM LFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGA KGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHSGKPLEEIERD TERDRFLSADEAVEYGLVDSVMTHRG >gi|316918893|gb|ADCU01000013.1| GENE 145 171541 - 172845 1723 434 aa, chain - ## HITS:1 COG:YPO3158 KEGG:ns NR:ns ## COG: YPO3158 COG0544 # Protein_GI_number: 16123320 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Yersinia pestis # 1 434 1 434 434 667 85.0 0 MQVSVETTEGLGRRVNITVAADSIEKAVNSELVNVAKKARIDGFRKGKVPMHIISQRYGA SVRQDVLGDLMQRNFVDAIIKEKLNPAGAPKYVPGEYKLGEDFSFAVEFEVYPEIELKDL ESIEVEKPVVEVTDADVDAMLDTLRKQQATWAATERAVEAEDRVTVDFTGSIDGEVFEGG KASDFVLAMGQGRMIPGFEEGILGHKAGEEFVIDVTFPEDYHAENLKGKAAKFDIVLKKV EERELPEFTEEFIKRFGVADGSLDGLKAEVRKNMERELKGAVRNRIKSQVIDGLVKANDI DVPAALIDGEVDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIAKKEL KADEDRVKALIEEMASAYEDPKEVIEFYSKNKELMNNMRNVALEEQAVEALLASAKVSEK ATNFSDLMNQTQAA >gi|316918893|gb|ADCU01000013.1| GENE 146 173358 - 173672 339 104 aa, chain - ## HITS:1 COG:STM0446 KEGG:ns NR:ns ## COG: STM0446 COG0271 # Protein_GI_number: 16763827 # Func_class: T Signal transduction mechanisms # Function: Stress-induced morphogen (activity unknown) # Organism: Salmonella typhimurium LT2 # 1 104 2 105 105 170 79.0 7e-43 MMREQIEAKLRAAFEPFYLEVVDESYRHNVPAGSESHFKVVLVSDRFQGERFLTRHRSIY GVLSEELADGVHALALHTYTHKEWEALQDTVPASPPCRGAGTLA >gi|316918893|gb|ADCU01000013.1| GENE 147 173884 - 174999 498 371 aa, chain - ## HITS:1 COG:no KEGG:ECL_00707 NR:ns ## KEGG: ECL_00707 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 1 354 1 353 362 478 62.0 1e-133 MRAQWSKEEANAWYQRQGCLCGFNYLPRTAVNWNELWQAETFDIATIDEELGWAENVGYN TLRVNLPFIVWLHDREGLFARIDAFLSVARKHGMSVMLTLMDDCGFSGNEPHLGLQEAPI PGVHNSRAVASPGRDTVCNLSTRNSIERYIHDVITTFRADGRILLWDLYNEPGNRGIFIS GADEALYAEKLEVFALDLLRQAFQWARDVNPIQPLTVGAWHIPDPISHPANTYQHPIDQE ALAQSDVISFHAYVATPDMVGLINQLNQFGRPLFCTEWLARHVGSTFEEQLPLMRTHNIA CYHWGLVAGKTQTTLPWPSIVKRRKDYAHLWFHDVFDVHGIPFRQSEMALVSRFMHSDEM RALETDMRKND >gi|316918893|gb|ADCU01000013.1| GENE 148 175064 - 176623 1164 519 aa, chain - ## HITS:1 COG:YPO1226 KEGG:ns NR:ns ## COG: YPO1226 COG2211 # Protein_GI_number: 16121514 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Yersinia pestis # 14 498 1 478 498 353 37.0 4e-97 MKPTERRVGYGTAIGYGVTDLFGGGAFAVIGTWLLFFYTTYCGLTVLEAGSIFAIARVID ALLSPIMGYVTDNFGNTWLGKRFGRRRFFLLISSPLMFLYALIWISDMNYWYYLGTYLSI ELLSAMVLVPWETLSSEMTNRFSERTRLSGVRMMCSQLGGLLAVSVPGVIMHFTGKDNPM TYTYTGMFFAVVFCVAVFITWMCTWEAKDVCDSDEPEYESAHGPGNLWHHMKGLVLDLLS SFKIRIFRQHIAIYISSFTALDVFGAVFTYYVVYSLKQDVAVVSGFLTVAAFVSVPGTFG FMMLLEKFNMTPSGALRLSYGCIFGVLCFLFYIYMTETQVSVWLFSGVFIIFGVARAGLY YIPWNIYSFIPDVDEIITKKRREGIFAGVMVLTRKSTVALAIMLIGIVLQESGFVKGSGV QPISAVHAIVGLMIFGTGALLAISFYITYRFKLTRDTHKILIKEVARLKLGGRLDDCDPR SRQVIKDLTGYEYDKVWGGMDKVCDKDPLSSVSYRNDPS >gi|316918893|gb|ADCU01000013.1| GENE 149 176726 - 177748 581 340 aa, chain - ## HITS:1 COG:SSO3049 KEGG:ns NR:ns ## COG: SSO3049 COG0673 # Protein_GI_number: 15899754 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Sulfolobus solfataricus # 2 334 18 359 371 146 30.0 6e-35 MQRINAAIVGCGSIHARHVEGIKHHPEGHLHTIVELDQAKGEALAFRYGSRYVHDYLDML CDEEIDVVHICTPHHSHREIIIAALAAGKHVFTEKPLALNVSEIQQIKQAALASKVLLGI CYQNRLNPTSQKIKSMLEQQALGKMIGMRAMLTWARSEEYYSQSEWRGRFAREGGSLLIN QAIHTLDLMQWFGGGVQAIKGVVDSTFLAQATEAEDTATANMMLGNGARGLFYATNCYST DSPLLLEIQCEKGILQLHQNSLWLIVDGRSTQLVSDEITIGMEKSYWGNSHNKAISSFYR AISENIHSGYVDINQAEISLRMVDAIYQSSLLRRWITVAE >gi|316918893|gb|ADCU01000013.1| GENE 150 177761 - 178834 1019 357 aa, chain - ## HITS:1 COG:AGl1780 KEGG:ns NR:ns ## COG: AGl1780 COG0673 # Protein_GI_number: 15891004 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 26 351 7 333 338 300 45.0 2e-81 MKNKDGMNYAPVGKPQPVVQPGEFVFAAAALDHGHIYGMCNGLIEAGATLKWVYDPDPEK VKKFVSQYPQAQFADSIASLLADEQVKLVAGAGIPAERCALGLQVMDAGKDYFTDKAPLI SLEQLAVAQQKVEQTGRKYAVYYSERLHVESAVFAGQLVQQGAIGRVVQTLGMGPHREGE GRPDWFYDRKQFGGILCDIGSHQIEQFLFYTANDNARVIAAQAKNFNHPQHPNFEDFGDA MLVGSNGATGYFRCDWFTPEGLSTWGDGRLTLLGTEGYIEIRKYVDITHQEQDVVYLVNN AGEFRYPVAGQVGFPYFGQLILDCLNRTENAMTQAHAFKAAELCVRAQMWANQNQLT >gi|316918893|gb|ADCU01000013.1| GENE 151 178831 - 180024 795 397 aa, chain - ## HITS:1 COG:SMc04139 KEGG:ns NR:ns ## COG: SMc04139 COG0673 # Protein_GI_number: 15963866 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Sinorhizobium meliloti # 1 353 3 349 357 175 33.0 1e-43 MQKIAIIGTGGISRAHIQGYLNFSDRCQIVALVDIYPEKAEEKKRQYRLNDAKVYSSHSD ILSDKNIDVFDICTPPYVHAEIAIDALNAGKHVLCEKPMAASLQECDAVIAAAKSSGKTL SIIAQNRFTDAFWRLKAVIDSGVAGKICHAQVDSFWWRGRSYYDLWWRGTWEKEAGGCTL NHAVHHVDAIQWMLGYPSEVVSMITNAAHENAEVEDLSAAIFRYDSGALTQLTASVVHHG EDQKIVIQGEKARISAPWDKYASISGSNGFPIEERDTECEKQLDELYRSVPKLAHTLHAG QIDNFLHALETGTIPLVDGVQGKRALELITAIYKSAITRAYVSLPIGADDPYYQTGGLIS LAPHFHEKSASVENFSDEGEIPLGKDMDKDMSSEVSA >gi|316918893|gb|ADCU01000013.1| GENE 152 180368 - 181438 516 356 aa, chain + ## HITS:1 COG:YPO0846 KEGG:ns NR:ns ## COG: YPO0846 COG1609 # Protein_GI_number: 16121154 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 345 1 345 360 262 41.0 9e-70 MTGKLKIKQLAELTQLSTSTVSRVLSGKSNVSPQAKEKVFTHAKLLGILHNIPAGRLLMN SILVCAPAKAFTPHGDRYYYEIIQSIISEIEHYDIRLSKCSLEVNGADISSFIKLINNDD IDAIIIIGIDDVMLYKLASESNKLAITINAKDKEMRLDSISPDHYSSSYSAATYLFQKGH RPVLLFTDLRRDTMLLRLDGFKRACLDHHVFFEESEHLLVNKGYEAEEAKLSFEKYLQNR AREALPSAILCGSNTIAQAVIDVFEQHGIQVPDDVSVMSLDFNIGIKKTNSLDITSVYLP CRELGRESVYVLQSRLTRPVRTAFNLLLQSQFYIGNSVADVNWKRKDLYQQSSNDA >gi|316918893|gb|ADCU01000013.1| GENE 153 181637 - 182221 545 194 aa, chain + ## HITS:1 COG:YPO3161 KEGG:ns NR:ns ## COG: YPO3161 COG3056 # Protein_GI_number: 16123323 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Yersinia pestis # 3 194 1 192 192 275 77.0 3e-74 MKMITKLFFPLLAVFALAGCATSTNTLDVNPKMALPQQDPTLQGITISINGADVRQDKAL AKVNRDGELVTLTPSRDLRFLLQEVLENQMTKRGYMVGPSGAVDLQIVVNQLYADVKEGN LRYNITTNADISIIAQAKNGNKQVKNYRSVYNEQGAFTASNSKITNAVNNAMTDIVANMA QDTSISDFIKANAR >gi|316918893|gb|ADCU01000013.1| GENE 154 182281 - 183762 1328 493 aa, chain + ## HITS:1 COG:YPO3162 KEGG:ns NR:ns ## COG: YPO3162 COG0477 # Protein_GI_number: 16123324 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 490 1 490 492 654 75.0 0 MPNSNLAIFAHRNTVILLLLGFASGLPLALTSGTLQAWMTVANVDLKTIGFFSLVGQAYV FKFLWSPMMDRYTPSFLGRRRGWLLVTQVFLLITIFAMGLLNPIQHLWWLAGLAVIVAFC SASQDIVFDAYKTDLLSAEERGTGAAVSVLGYRLAMLVSGGLALWLADRYLGWQGTYWLM AGLMLIGIVATLCAPEPQVSAPAPRTLEQAVIEPLKDFFGRNNAWLILLLIVMYKMGDAF AGSLSTTFLIRGVGFDPGEVGLVNKTLGLFATIVGALFGGVLMQRLSLFRALMLFGILQG VSNFGYWLLAVTDKNLLTMGSAIFLENLCGGMGTAAFVALLMTLCNKSFSATQFALLSAL SAVGRVYVGPVAGWFVELHGWPLFYLFSIIAAVPGLLLLAACRKTLEYTQTTGEFSRRTR FARAYKVASQSLLIGCVLIALWLIGLLVESVLSLDAGSVMLWLLDIGLLLSLFGILLGAT LDYRSQRHHQQII >gi|316918893|gb|ADCU01000013.1| GENE 155 184394 - 185323 654 309 aa, chain + ## HITS:1 COG:STM0443 KEGG:ns NR:ns ## COG: STM0443 COG1622 # Protein_GI_number: 16763824 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 2 # Organism: Salmonella typhimurium LT2 # 1 308 1 304 318 448 72.0 1e-126 MRLSKLNKSFGILSLIAASALLSGCDMALLDPKGQIGLEQRSLILTALGLMLIVVIPVIV MTIVFTRKFRASNTDAKYTPNWSHSNKIEAVVWTVPIIIIAILATLTWKTTHELDPYKPL VSDVKPIRVDVISLDWKWLFVYPDLGIATVNELAFPANTPVNFRITSNSVMNSFFIPRLG GQIYAMAGMQTQLHLIANEPGKYNGISSSYSGPGFSGMKFTAIATPDNATFDQWVADVKK APNQLTTMAEFEALAKPSEYHPVEYFSSANPELFVDVINKFMGSKKMDMKKDEHMDMDMG EHAHAGAEE >gi|316918893|gb|ADCU01000013.1| GENE 156 185327 - 187318 1629 663 aa, chain + ## HITS:1 COG:ECs0485 KEGG:ns NR:ns ## COG: ECs0485 COG0843 # Protein_GI_number: 15829739 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 1 # Organism: Escherichia coli O157:H7 # 1 663 1 663 663 1113 86.0 0 MFGKLTLDAVPYHEPIVMVTVAGIILGGLALLALITYFGKWKYLWTEWLTSVDHKRLGIM YIIVAFVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVV GLMNVVVPLQIGARDVAFPFLNNLSFWFTVVGVVLINLSLGVGEFAQTGWLAYPPLSGKE YSPGVGVDYWIWSLQISGLGTLLTGVNFFATIIKMRAPGMSLMKMPVFTWTALCTNVLII AAFPILTVTVALLTADRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILVLPVFGVFSE VVATFCKKRLFGYTSLVWATVCITILSFIVWLHHFFTMGSGANVNAFFGIATMIISIPTG VKIFNWLFTMYQGRIVFNSAMLWTIGFIITFTVGGMTGVLLAVPGANFVLHNSLFLIAHF HNVIIGGVVFGCFAGMTYWFPKAFGFTLNETWGKRAFWFWIIGFFVAFMPLYGLGFMGMT RRLSQQIDPAFHPLLMVAAGGAALIACGIACQLIQIFVSIRDRDQNRDLTGDPWGGRTLE WSTSSPPPFYNFAIEPQVHSRDAFWELKEEGIAYKKPEKYAPIHMPRNTGAGVIIAGFSL VFGFAMIWDIWWLAIVCFLGMIATWIVHSFNDDVDYYVQVPEIERIENQHFEQISKAGVK YDN >gi|316918893|gb|ADCU01000013.1| GENE 157 187308 - 187928 602 206 aa, chain + ## HITS:1 COG:YPO3166 KEGG:ns NR:ns ## COG: YPO3166 COG1845 # Protein_GI_number: 16123328 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 3 # Organism: Yersinia pestis # 1 206 1 204 204 300 78.0 1e-81 MTTDTLHHTHGQEAHAEHGHHDAGDTKVFGFWVYLMSDCILFASLFATYAVLVNGTADGP SGKDIFELPFVLVETFLLLFSSITYGFAMLAMNKGKVASVNTWLGLTFLFGAGFIAMEIY EFHHLIAEGFGPDKSAFLSAFFTLVGTHGIHVTSGLIWIIVMMIQVGKKGLTARNRTRLM CLSLFWHFLDVVWICVFTVVYLMGAM >gi|316918893|gb|ADCU01000013.1| GENE 158 187928 - 188278 248 116 aa, chain + ## HITS:1 COG:YPO3167 KEGG:ns NR:ns ## COG: YPO3167 COG3125 # Protein_GI_number: 16123329 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 4 # Organism: Yersinia pestis # 9 115 3 109 110 125 80.0 2e-29 MSHSPTTGHHSTDNNGASHGSAKSYMIGFILSVILTVIPFWMVMEGTASHQTILITVVAM AVIQIFVHLVYFLHMNTSSEERWNLIALAFTALIIAIVVVGSLWIMYNLNINMMVH >gi|316918893|gb|ADCU01000013.1| GENE 159 188292 - 189182 856 296 aa, chain + ## HITS:1 COG:STM0439 KEGG:ns NR:ns ## COG: STM0439 COG0109 # Protein_GI_number: 16763820 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Polyprenyltransferase (cytochrome oxidase assembly factor) # Organism: Salmonella typhimurium LT2 # 1 293 2 293 296 440 84.0 1e-123 MMKQYLQVTKPGIIFGNLISVIGGFLLASKGSLDVPLFIATMVGVSLVVASGCVFNNYID RDIDKVMERTKNRVLVKGLIAPKVTLAYATLLGLAGVALLYVAANPLAALLAVIGFIVYV GVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVSNEFDAGALILLAIFSLWQMPHSYAIA IFRFKDYQAANIPVLPVVKGISVAKNHITLYIVAFMVATLMLSLGGYAGYKYLVVAAAVS VWWLGMALSGYKKAVDDRVWARKLFVFSIVTITCLSVMMSVDFQSPATESLLTMLR >gi|316918893|gb|ADCU01000013.1| GENE 160 189556 - 190923 1049 455 aa, chain + ## HITS:1 COG:YPO3169 KEGG:ns NR:ns ## COG: YPO3169 COG0477 # Protein_GI_number: 16123331 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 451 3 453 456 595 72.0 1e-170 MNDFQMTPEERKATWGLGTVFSLRMLGMFMVLPVLTTYGMSLAGASETLIGIAIGIYGLT QAVFQIPFGLFSDRIGRKPLIVGGLLIFALGSAIAAMTDSIWGVILGRALQGSGAIAAAV MALLSDLTREQNRTKAMAFIGVSFGITFAIAMVAGPIITHAIGLSGLFWMIALLALGGVV ITLLFIPTPHHHVLNRESSMVKGSFSKVLANSRLLKLNFGIMCVHILLMSSFVALPPLME QAGLARDNQWKVYLVTMLIAFACVVPFIIYAEKQRRMKQVFQVCVILMLAAEVILWYAGL HLWGIIFGVQVFFIAFNVMEALLPSLISKESPVGYKGTAMGIYSTSQFIGVAIGGSLGGF LYAHDGAATVFTGCAVLAVIWLAVSLTMQEPPYVSSLRIVIPAGIPATPQLEQAIKQHHG VADVVLIPEEQTAYVKIDSKITSRGEIELFVAGQH >gi|316918893|gb|ADCU01000013.1| GENE 161 191621 - 192112 600 163 aa, chain - ## HITS:1 COG:YPO3170 KEGG:ns NR:ns ## COG: YPO3170 COG1666 # Protein_GI_number: 16123332 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 163 4 166 166 233 77.0 1e-61 MPSFDIVSEIDIQEVRNAVENASRELGTRWDFRNVEASFELIEKNESIKISSVSDFQVNQ LVDIMREKLAKRGIDGAALEVPEQIEHSGKTYSIEAKLKKGIDTTMAKKVIKLIKDSKLK VQTQIQGEQVRVTGKSRDDLQGVMALIRGADLGQPFQFNNFRD >gi|316918893|gb|ADCU01000013.1| GENE 162 192300 - 193211 532 303 aa, chain + ## HITS:1 COG:YPO3171 KEGG:ns NR:ns ## COG: YPO3171 COG1893 # Protein_GI_number: 16123333 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Yersinia pestis # 1 303 1 303 303 426 66.0 1e-119 MKITVLGCGALGQLWLSALEQDGHDVQGWLRVPQPYCPVNIIQLDGKSYNKNLAANDPMH LAESQILLVTLKAWQVYNALAPLLPKISPYCRIILLHNGMGSQDELPYVEQPLFQGVTTH AARHDGNTIIHVAAGATHIGPTNSAAIGQSNIAEVLHHALPDVAWHDNIMPAIWKKLAVN CVINPLTVIYNCRNGDLQKYMPHVVALVKEIAYVMEAEGYSTSSDSLLHYVTNVICMTAD NYSSMYQDVLAQRHTEIDYITGYLLKMARKHGISLTENSHVFETIKRKEQTYERIGSGVS GSW >gi|316918893|gb|ADCU01000013.1| GENE 163 193174 - 193764 663 196 aa, chain + ## HITS:1 COG:thiJ KEGG:ns NR:ns ## COG: thiJ COG0693 # Protein_GI_number: 16128409 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli K12 # 1 196 3 198 198 291 75.0 7e-79 MSASALVCLAPGSEETEAVTTIDLLVRAGIEVTTASAAGNGDLMITCSRGVKLLADKPLV QVADESYDVIVLPGGIKGAECFRDSELVVEKVRQMHLEGKLVAAICAAPALVLAHHKLFS VGNMTCFPTLKDKIPENQWIDKRAYYDERVNLLTSQGPGTSIDFALKIIDVLLGKEKAAE VAAQLIPASGIWAYNE >gi|316918893|gb|ADCU01000013.1| GENE 164 193767 - 194183 260 138 aa, chain - ## HITS:1 COG:no KEGG:S3732 NR:ns ## KEGG: S3732 # Name: yiiX # Def: putative peptidoglycan peptidase # Organism: S.flexneri_2457T # Pathway: not_defined # 2 134 62 194 202 145 51.0 4e-34 MVFEASGDVRYTPLQKWIDHGVGKSYVAKRLKQPLSTAQVQALNQQAGYFIGKPYDILFG WSDTDIYCSELVWKMYFRAAGLKIGTVQRIEDFDLSSPAVKKIIKARYGDKLPLNEQVIS PVAMFDSPLLETVASVGY >gi|316918893|gb|ADCU01000013.1| GENE 165 194425 - 195873 1381 482 aa, chain - ## HITS:1 COG:ECs0477_1 KEGG:ns NR:ns ## COG: ECs0477_1 COG0301 # Protein_GI_number: 15829731 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 401 1 401 402 696 85.0 0 MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKKQIDEVAIVRHWDHIEVRAKDESRT EQVRDALTRIPGIHHILEVDDCPYTDMHNIFEQTLEMYRDKLEGKTFCVRVKRRGKHEFT SIEVERYVGGGLNQHIESAKVKLSHPQVTVHLEIEDDRLLLIKGRYEGLGGYPIGTQEDV LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGSAHEIGVKQVAHYLWNRFGSSHRVRFV AIDFAPVVGEILEKVDDGQMGVILKRMMMRAASKVAERYGVQALVTGEALGQVSSQTLTN LRLIDGVTDTLILRPLISHDKEHIIDMAREIGTEDFAKTMPEFCGVISKSPTVKAVKSKI EAEEENFDFDILERVVAEAQNMDIREIAEQTSEQVIEVETVEALTGDEVVLDIRSNDEQE DKPLKIEGLEVKSLPFYKLATQFGDLDQSRSYVLYCDRGVMSRLQALYLKEQGYNNVKVY RP >gi|316918893|gb|ADCU01000013.1| GENE 166 196121 - 196378 314 85 aa, chain + ## HITS:1 COG:YPO3175 KEGG:ns NR:ns ## COG: YPO3175 COG1722 # Protein_GI_number: 16123337 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Yersinia pestis # 8 78 12 82 84 92 84.0 2e-19 MAKKAPAAPSFEQALSELEQIVTHLESGELPLEDALNEFERGVQLARLGQQTLQQAEQRV QILLNDDKDAPLSPFNTDHVSVDKS >gi|316918893|gb|ADCU01000013.1| GENE 167 196381 - 197286 874 301 aa, chain + ## HITS:1 COG:YPO3176 KEGG:ns NR:ns ## COG: YPO3176 COG0142 # Protein_GI_number: 16123338 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Yersinia pestis # 2 301 8 306 306 374 71.0 1e-103 MVVFEQLLKTYHQRADAALIQYIEPLPFADGQLVAAMRYGALLGGKRLRPYLVYATGEMF GLSLDNLDAPAAAVECIHAYSLMHDDLPAMDDDNLRRGQPTSHIKFGEAHAILAGDALQT LAFSILADSPMPDVAVSDRLAMLSELAQASGVAGMCGGQALDLEAEGKYVDLQSLERIHN HKTGALIRCAIRMGALAAGDTGRAALPLLDRYAAAIGLAFQVQDDILDVIGDSEKTGKPQ GSDQELEKSTYPALLGLKQAQNKALDLYQDAIQVLEELEQHHSIDTLALKSLASFIIERD N >gi|316918893|gb|ADCU01000013.1| GENE 168 197472 - 199337 1629 621 aa, chain + ## HITS:1 COG:dxs KEGG:ns NR:ns ## COG: dxs COG1154 # Protein_GI_number: 16128405 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Escherichia coli K12 # 1 619 1 619 620 1098 84.0 0 MSFDIAKYPTLALVDDPNDLRLLPKESLPKLCDELRQYLLNSVSRSSGHFASGLGTVELT VALHYVYNTPFDSLIWDVGHQAYPHKILTGRRDRIATIRQKGGLHPFPWRDESEYDVLSV GHSSTSISAGLGMAVAAEREGKNRRTVCVIGDGAITAGMAFEAMNHAGDIKADMLVVLND NEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVLSGLPPIKELVKRTEEHLKGMVVPG TLFEELGFNYIGPVDGHDVQALAATLKNMRDLKGPQLLHIMTKKGKGYAPAEKDPISWHA VPKFDPASGTLPKSSGGLPTYSKIFGDWLCETALDDNKLMAVTPAMREGSGMVRFSKEYP QQYFDVAIAEQHAVTFAAGLAIGGYKPVVAIYSTFLQRAYDQVIHDVAMQKLPVMFAIDR AGIVGADGQTHQGAFDISFLRCIPNLVIMTPSDENECRQMLHTGHQYQAGPTAVRYPRGS GTGATLEPLASLPIGKGVVRRKGEKIAILNFGTLMPDALTAAEQLNATVADMRFVKPLDE ALILELAATHDALVTLEENAIIGGAGSGVNELLMSKRKMVPVLNLGLPDRFIPQGTQEEA LHEIQLDAQGIVDQIQNWLQN >gi|316918893|gb|ADCU01000013.1| GENE 169 199423 - 199941 501 172 aa, chain - ## HITS:1 COG:YPO3708 KEGG:ns NR:ns ## COG: YPO3708 COG3157 # Protein_GI_number: 16123846 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 172 1 172 172 311 84.0 4e-85 MPTPCYIAIQGKTQGNITSGAFTSDSVGNIYVQGHEDQMLVQEFEHIVTVPTDPQSGQPS GQRVHKPFRFTVALNKAVPLLYNALASGEMLPKVELKWYRTSIEGKQEHFFSTILDDATI VDIDCHMPHCQDAVKAEFTQLVKVSLAYRKITWEHTVSGTSGADDWRVPSES >gi|316918893|gb|ADCU01000013.1| GENE 170 200255 - 201526 440 423 aa, chain - ## HITS:1 COG:PH0854 KEGG:ns NR:ns ## COG: PH0854 COG0251 # Protein_GI_number: 14590714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pyrococcus horikoshii # 12 127 18 133 137 94 38.0 3e-19 MSGYNEVLSRNTENAPKNTGIYSQTVAFSHYNNFSAQLPIDPKSGKMVFGGAKEQAEQCF KNIKAITESINHDMSDVVRITIFVKNIKDVDAVSLVYKSFFPTYVPALTVVAVNALPMNA LVQVEALLSNGEGTIPNAPQSGDLIKLTNNTINAPISSLSNQTVSFSHYNNLSAQLPINP ITGRVVEGGIKEQTKQCLKNIKAIIESIDVPFDDIVKVNVFLKNLSDIDAVNDVYTTFFP DSAIARTIAYVPARTVIAASALPMDALVQIEAVVSHGDGTPPQAVEDRHGLIIEPHNTVN APKCALSTQTVAFSHYNHLSAQLPIDPKSNKLVAGGIKEQTVQCLKNIKAIIESVEHVMG DVVKVNIFLKNIADIDAVDEVCATFFPGGIPARRIVGVSALPKDALIQIDVVAANAEGTP PQA >gi|316918893|gb|ADCU01000013.1| GENE 171 201891 - 202964 580 357 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|90408249|ref|ZP_01216415.1| ## NR: gi|90408249|ref|ZP_01216415.1| hypothetical protein PCNPT3_09868 [Psychromonas sp. CNPT3] # 20 349 21 351 357 81 22.0 1e-13 MRSLSWLLLGTLMLSATGCGPHSLHKDVAMSTQLNTQKHCFGRYEIELPKFMYMKSGNYS FENFDIEIIKAVRTGYPTIEKDWRAYINGKITPDAKADGIWKGSKLIIEDMKRNPRVMAE YLNTSASPDTDLSSMYVFKPYYLLSVKDRDEWILATGTWINSPRSVGEGNAQSEVRNKIN AQASDIAKIAYHKYPHYEQGYCLDDEYQYYPGRLEKRDDYTIIWRGTTGSADTHSRITLN LESLNKDEQSVLDSRISKGKLLRTFFSSTTVVVGGIKGELYISHAKLNPTAREFQWLPSG TELGNRLKPLIMIDGRIDTHDFPAEYRDKISGEEMILWILESIKMRTGGDEDILSHR >gi|316918893|gb|ADCU01000013.1| GENE 172 202980 - 203120 69 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAQNSTPVEKCSEYHDSLYQDEKIRAALYKTLQTAAWEYNAKLPKK >gi|316918893|gb|ADCU01000013.1| GENE 173 203403 - 204476 586 357 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|90408249|ref|ZP_01216415.1| ## NR: gi|90408249|ref|ZP_01216415.1| hypothetical protein PCNPT3_09868 [Psychromonas sp. CNPT3] # 20 349 21 351 357 82 22.0 3e-14 MRRLSWLLLGSLVLSATGCGPHSLHKDVAMSTQLPTQKHCFGRYEIELPKFIYLKSGAYS FENFDIEIVTALKSERPTIEKDWRAYINGKIAPDAKVDGIWKGSKLIIEDMTRNPRVMAE YLNTSASPDTDLSSMYVFKPYYLLSVKDRREWILATGTWINVPRDMGEINAQSEVKSKIN VQAGDIAKIAYHKYPHYEQGYCLSDEYQYYPGRLEKRDDYNISFSGIVGEKYTFSFINIS VQSLNKDEQSVLDSRTSKGKLLRTFFPSTTVVVGGIKGELYVSHDKLNPTGREFQWLPSG TELGNRLKPLIMIDGEIDTRDFPAEYRDKISGEEMILWILESIKMRTGGDEDILSHR >gi|316918893|gb|ADCU01000013.1| GENE 174 204492 - 206906 1569 804 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|298507199|gb|ADI85922.1| ## NR: gi|298507199|gb|ADI85922.1| hypothetical protein KN400_3110 [Geobacter sulfurreducens KN400] # 490 762 231 484 538 67 27.0 4e-09 MSDHECRGDCQCKKVVIPVIFVPDIMGTRLANAQNHKVVWDPMAGMGSYHTPLGTAATDL SGMMSDPSGKVTSSPMVQKLLDLQKKLTALHGGLMALYKTSQKIMKALGMDSLAKRLERN ATDATSKLKEQLADVNTKIAHIEKEINNVFDVMGKAEDILRIGRNVWGAISVLEWMFRDA AKRREILVGDSKKVVGRDDSLLEIGQDAVKGSLDKTYFSTMTSVRVQDISMRFKQGWGEV CWSQYGEFLMTLQRHLDARFNIKDVSAAGQSGNIPKPTLPTGKALKDLLAAIESLLDFGS KPATPAAASPAASTAAASPAAPAATDGDKSKDKSKEKDTPVPWGADANFAKVMGGYAFPL HVVGYNWMQGCADAAQRLTTRISQIMGEYQTTGTNETDSTWLTKKPVDQVILVSHGAGGF VVRAMLAGMSPETTGSSGASSGGGDKNSQDDDYMSGVDPKINAPAAASSSKNGSSFAGIQ KTTPLDKSLLLKAVHVGLPTNGMPDIYCWFRAGMQTPVSVDWSKPDEAMKNKTLAYISNQ VLGADAAEITMVLSYSQSTLECLPNNSYAKGWLCYQPPSFSLVEGEKAPAPVAMAVEGDI YAEYQANTHWYRLLDKERLCGEKKNIEANAASVYGYLDKAKIFHTTLASGGQDNTQQLSG KTSKLTTRDKAVWQAQGITPLPPAEDWVKFGSSIANSNGFLASIDSLLGTHIFSSLADEG KGTLYLTSSRAGGAVLPTEFVLQPGSGEGDGALPISAAVGAKPIEECSEYHDSLYQDQKI RAALYKELQTAAWSYNANPPAPKK >gi|316918893|gb|ADCU01000013.1| GENE 175 206903 - 207835 669 310 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|90408262|ref|ZP_01216428.1| ## NR: gi|90408262|ref|ZP_01216428.1| hypothetical protein PCNPT3_09933 [Psychromonas sp. CNPT3] # 138 281 26 168 194 75 31.0 5e-12 MVEKKYWYLNEQDHQVLQAGREQTLIWNALRSVMAIKDMPPIPLGATGEAWLTQTVEQAR RYDVMNSYHLPLWLEIAHRGGENFWQLEDVQAVLNAGEINDVRINTLLQMADLEQRPVVE TPVQPVDFTQHAVYRWCEAGLPLWALVDGAFDAAPQGFACGLDVAHYSLFNSADRALESH GPWLIAAWMKPRMVQYLLSRPAYAINTLWLVADGEVEDIVTHLQGLLYVRQGEGEGGSRF RFHDQRVFATWINSLAPERLDDFFGPVQRWFSPDPNPLWSAQQLHGYSQMDNQLERRIIA TYPPRTGGDA >gi|316918893|gb|ADCU01000013.1| GENE 176 207843 - 208121 285 92 aa, chain - ## HITS:1 COG:no KEGG:AZL_a05160 NR:ns ## KEGG: AZL_a05160 # Name: not_defined # Def: hypothetical protein # Organism: Azospirillum_B510 # Pathway: not_defined # 1 85 3 91 766 82 48.0 5e-15 MGVPVALKGHQHVCPLPKHVGGPIKEGHPGLTVNGIPVALVGHKCECKTGGPDIIAVGNP LLTVNGIPVAVMGSQTVHGGVVIQGDPGLIIG >gi|316918893|gb|ADCU01000013.1| GENE 177 208132 - 210186 1729 684 aa, chain - ## HITS:1 COG:YPO3606 KEGG:ns NR:ns ## COG: YPO3606 COG3501 # Protein_GI_number: 16123748 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 5 645 169 796 800 547 42.0 1e-155 MADNTGLQFTFTTQSLPEKTFSVVSFALNEGLSQIYSLDVELASITAEIAFSRVLDESGE LQIWYNGEIKRRVNGIITRFSHSDTGNERTRYSVTLRPQMWLLSLDQSSRIFQQQTPQQI ITTLLQKANIISFNFQLRYEHPTREYCVQYRESTLAFIERLAAEEGISWYFHFDNDKQEI VFVDDCTFLPMGETLPYNPHQRGLSEGASIQRFSYEENVRPAQVLLKDHTFKNPAWEMLY QQHSKSDHQRSEIQHYDYPGRYKTDFNGQAYSGYRLDALRQDAMQARGRSDSPSLMGGQC IIMQQHPNEAFNQRWQIVSLLCEGQQPESQKEEAGVSGTYLESQIVVIPDRQTWRPMPDP RPRVDGPQIAVVVGPENEEIYCDEVGRVKVQFPWDLEGKGNETSSCWIRVAQSWAGSRYG AMSVPRIGHEVIVDFLEGDPDQPIITGRTYHVVNVPPHALPVHKTRTVLRTDTHKGAGYN ELSFEDEQDKQLIYLHAQKDLQTEVKNNQYIMVEQDCSKIIKHDQTEEIGNDKTSDVTHD HIERIHHDQMINVMHNQQIQVDNQYLFHVLNQRKDQMGADFTEDIAGDHHHTVAGTYELL ANKKVLINTNDLVLQGAQSVVLQGPGGKIVIDSSGITLSSPIVNIKALTRITSGGGNSMS ALSATAMNGDPLSEICPICLQSLE >gi|316918893|gb|ADCU01000013.1| GENE 178 210198 - 210608 348 136 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKIKVVTLSLLLVSLVGGCQAKSSAIPSVQKQMNGLADLIGSAAFLRDRCGVSDIPANK SLSMIAVMTGMEMGWDTREYYPDGKSDDMYNATLDQMGQKVEQSLMADNPDVAGTCQSLA GNQHIAGFVAQAKARG >gi|316918893|gb|ADCU01000013.1| GENE 179 210663 - 212027 865 454 aa, chain - ## HITS:1 COG:Z0249 KEGG:ns NR:ns ## COG: Z0249 COG3515 # Protein_GI_number: 15799898 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 2 445 33 465 499 187 29.0 5e-47 MANLDYQQVATGKDPRDFDEFERIRGEINKMTHPLHPPVDWPLVQQLGVALFTKNGVDLQ SVVYYSMARTRLNGWNGFAEGCELMAVLIVAQWDMFWPMPTAARARNEMLDWFAARVGAL VRQLTRSPETMRDVFRAEYALKRVSDKLQLHKEINPMLINSLLYFLQECVKESKAAATSM QSGEPPVVLPLVYLPQQGDTANAPFSSPSAMPKTSDTQQVFTSIQSINTQKKRFPWLPVL SGAVTGCLLTLAAVFGYHAWQPEDSVAQFLLAAQPSPALMSLNQALVHDADLQQQEQKVL RLYQEKLTSIVNASPIEPLQRGQSISQLLQRVYPQNSVSTQWQQQLESLSAAGKGSDYAK TQQAVQSLLDELLESEKLHRGYMTISSLKTGLYNIQSQLNAAPPVTYLLTQLEQQKQQGI KPSPALLHQIDDQLRGLQARYLLLQAEKGDGTPN >gi|316918893|gb|ADCU01000013.1| GENE 180 212079 - 215777 2354 1232 aa, chain - ## HITS:1 COG:YPO3603 KEGG:ns NR:ns ## COG: YPO3603 COG3523 # Protein_GI_number: 16123745 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 28 1232 2 1177 1177 1014 44.0 0 MTILSLISTVVSNVLTPIRYIRNLTRFRLPFSLPRLSFSLVVLWILWIIGLFSIWWWGPL WHIGDLAPLSTPSRRVVATLLMLLLALSVVSIYLYTQVAKSVVGAVQDKNEPYKNSLEQQ KEYLNGWLAHYQQRSHRRNAMYERPWYIVLGQSLSGKTSLIQKSNQIIPIGIADKQYVAN KDRSAFKMLQLWLTQQAVIIDPPGEFFSPTDEETEKDESEADISRGRALHLHLQDWLMEV RQRQPLNGVILTVNIQEIMEMTSEGRREWSQRWQTHILEMSDRFACRIPVYLVFTKLDVL TGFETIYPLLERSLLDETLGITFAANTESDEEWRGELSKFWSEWQENFNELMPEHMVHRT SLDLRSALFNFVGQIAGLRSVVEEVISGLKRHYNRDPGRQMLIRGCYFTSSLQQNRRSDF FSDTICRHYKLYVSNKNVWANNDNQRGYFIQKLFNQVLFSEPNLAGENYEHVRVRRHNLT LIAVISGGFAVLLLSGWYYYYLQNYHAGEMALRKVSEFQRLGEPAHNQPLGADWLPHMNI IRDATMSYGDYREKNQFLSDMGLYQGAKIGQLVEKTYLRLLESRFLPVLMKDLQQHLDGA PANSEEKLAILRIMRMIDDKSGRNIPLVEEYMRARWQTAFTGQRDVQERLMMHLDYALQH TDWALDRSRSDAEAIKSYEPFSASIRAAQIELSKLPLYQRVYQNLVIKAKEQLPQDMDLR TEIGAQFDSVFVFDNEALLKVPQFWTRYGLSHFFVKQTDKLVSITALDAWVLGLTDNVDY SDADKAEIERQITDRYVGDYTSTWRNAVNNLSIKPFDDVEQASAALDAVLNNGQPLWRTL VLLGDNTQPHLVTALSSDVKTPVVVAAKQGKNQKTVADKVLNSAQKESLEQLAEQPEYVL LSRIGRPFSEQNALVESGDDQNGQVQQAYKALNDMSNELHRISNAPEPGKAALLLVQMRL QQNNADAFFTAQQLSKNLSDPLGRWVEQLADNSWKAVTALALQSLEAEWSKTVVTPFMNQ MADRYPFNPEASKEVALSDMERFFGPNGTLDSFYKNNLKVFIDGNGSLDSEGNSLIRPEI LTALEQAEKIRSTFFTAQNGFGIQFAISPVDLSANKRRAVLNLDGQLVDYTQGNSHTAHL VWPNTMRAGNESKLTLVPDVSGGSPRSVGYVGPWAMFRLWDKGELTNIQDNSFDMRFAVD NGTMIYRVYVDESNNPFAGGLFSQFTLTDQLY >gi|316918893|gb|ADCU01000013.1| GENE 181 215784 - 217229 689 481 aa, chain - ## HITS:1 COG:YPO3602 KEGG:ns NR:ns ## COG: YPO3602 COG3515 # Protein_GI_number: 16123744 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 12 461 10 458 465 335 43.0 1e-91 MSTLENIVLMDHPWRQRILTSLPAVNMAARVSDDLPLWEAIDSEIAKLGSLSHEQVDIPN LQKGCLSLLETECKDMRIVVHLLRTLQHGAQPSNIALACTLIVDFVSHYWSVAWPQDTKL RQRLLLQVIKRFGSSISYFCQQADENSRELVRSGLLQLQAFLSPLDPLLANEVSVLIPQF GREREATSLAPSSTPVTTKTVVSQDNADIPAVMPKVEVQHESDRVWRQTLLKVAELLCEN HPDDPIGYSLRRHAIWYTLQTAPLSKDGRLTQLAAVSRERVADYRSALQSAALPLWQQIE TSITLAPYWFDGHFLSAQIARHLGFNNVADAIREAVLRLLDKIPALRQMTFSDGSPFVSD DTQQWLAERQQSSRFSSGSYELVWDKYREQGLNAALQQLEQQQMDVQEPREQFYNQLTIA QLLMQAGLTTLANQHFDNLWRNSQGVTLADWEPSLLTILAQNSLSAGISAERPVPVLAGE E >gi|316918893|gb|ADCU01000013.1| GENE 182 217281 - 217961 295 226 aa, chain - ## HITS:1 COG:no KEGG:SeAg_B1101 NR:ns ## KEGG: SeAg_B1101 # Name: not_defined # Def: type VI secretion-associated protein, family # Organism: S.enterica_Agona # Pathway: not_defined # 41 226 48 237 240 150 43.0 3e-35 MKNKLSIGVVAISLISMGSWAAGKPQKPEISMALSPDIQLALSACRDQPSPLPRLQCYDQ AWHPEIKAISKDKADETWRQIMAQEQQRTSDDPPLMLRELKNTSGQPVLMITTPSLEHSF TRAILAVSCVENITRMQIVFYQLQGSGESALTLRTDRNDINSRWFWRSSGYRLESSRGLS GIAEIQQLIGGTTLTILTGKETLNGLSFRLNNLQTTLQPLRKACHW >gi|316918893|gb|ADCU01000013.1| GENE 183 217958 - 219478 360 506 aa, chain - ## HITS:1 COG:VCA0117 KEGG:ns NR:ns ## COG: VCA0117 COG1221 # Protein_GI_number: 15600888 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Vibrio cholerae # 68 502 64 525 530 132 26.0 1e-30 MINPAQQATLALLSCETLETLGQAFCECIQQWAPEAYLLNGVIPVSGQELTCYINGRDSA ALKLRFDDFSHPFSQVMRTGKASIWSTLNYGVRIEHQAFRQLVQSMGKECGLFVQPLFDA EQHLYGLFAIFDSTAMLNALQQTEHPFIYLLQVYQAQIKHLKKEADMMAKNHVRNRDNDV LALSRNDATAVLPRVLVGNSSYICQLRKKIQVAITHDIPVAIEGESGSGKSEIAQLIHTY SQTPGSLVTVDCNSLDLQQQGGHLFGHTNVAESALMQANKGTLLLENIDKLASCWYGKLQ HALDCGEIMPCQNLEQGSSRFRLLVTSCQPLSTIASSIPTFLPVYQRINHYPLKLQPLRY WREDLVVLSQHLLRKLCLQHQKPSFVISDELQLQLHSYHFPGNVSELKRLLELLLLESSR AGNSEGHVENNAALMELLALNFSIGSVTEPDYTQSGSLKEVVSVFEKAVINHRLLRQCFN KERVAMSLAISRRSLDMKCKKLGLAR >gi|316918893|gb|ADCU01000013.1| GENE 184 219478 - 222078 1185 866 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 106 862 97 809 815 461 36 1e-128 MIRIDLPALVERLHPVARNALENAAAWSLGQQATEITVGHFLNHLLETPLCDVRMIFSQL DVDIDSLKQTLLNQPLDRSAYPQSYPSFSPLLVEWLQDSWLLASVELQHENLRSGVLLLG LLHHRHRYLSAEVCYRLEGLNREQLTKDFAQLTQDSAETPVVKESNSQNTSHQQAGGAEG SLLSRFTQNITEQARVGKLDPVLCRDDEIDLMIDILCRRRKNNPIVVGEAGVGKSALIEG LALRMIAGLVPEKIRGSELLSLDLGAMQAGASVKGEFEKRFKGLMQEVLEAEYSIILFID EAHTLIGAGNQQGGLDVSNLLKPALARGELKTIAATTWHEYKKYIEKDAALSRRFQVVQV KEPSIEQATIILRGLQSRYEQAHNVLINEDAIQAAAQLSARYLSGRQLPDKAIDVLDTAC ARCAINLTTPPRAISSLHTRLSEYQLEITQIEREQRIGLNDHASRLSDLYQLQQTSKNEL DEQHQVWQQQQKHVVGIISLRQRILAEGSTPEIAENLVQLENELSELQKQGVIVTPHVDR LLVASVIAEWTGVPLNQISRSELKVITELPEYLRGDIKGQNLALSHLHRHLLTARADLRK TGRPLGAFLLVGPSGVGKTETVLRIADLLFGGRAWLTSINMSEFQEKHTVSRLIGSPPGY VGYGEGGILTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRIIDCKNVV FFLTSNLGYQTIVDHSDRPEEIQDALYPELAAFFKPALLARMEVIPYLPLSPDVLREIVA GKLAHLDKTLSERFNAQIVIDDEVHEEIMRRAHRKENGARMLESVIDGVLLPPVSLILLQ RMAAGESITKIHFSAEDGEFGVEVDS >gi|316918893|gb|ADCU01000013.1| GENE 185 222153 - 222977 542 274 aa, chain - ## HITS:1 COG:YPO3598 KEGG:ns NR:ns ## COG: YPO3598 COG3455 # Protein_GI_number: 16123740 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 46 273 34 254 255 192 41.0 4e-49 MDAIEDTAERATETKGGIDFKSGLGGAGEVMHAVSDDALSCMMHKNPLIEASSPLLGFIN RIKSLNEPPVIEPLIAQIEQEIKGILQRLEIENYEPGILLSWSYFFCTFIDEMVMAKPWG VEGWAQHTLLVRFHSETWGGEKCFQLIDRLLLEPARYRDLLAFIHLCLCLGFQGRYRMTM QYQEDREKILRNIHQKLQALNKVDSTKRQEMLNATVMHYGKANNESRYRLNRYLSGKKVL WGIALAVLLGYGMFDWSLHSQTQNIITQLNALLP >gi|316918893|gb|ADCU01000013.1| GENE 186 222983 - 224323 779 446 aa, chain - ## HITS:1 COG:YPO3597 KEGG:ns NR:ns ## COG: YPO3597 COG3522 # Protein_GI_number: 16123739 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 445 1 446 448 478 52.0 1e-134 MLTRNRIVWSEGLFIKPQHFQQQQRHIDYLLQSRFAALGEHFFGVTELKINDDHLSFGRI TLSGASGIMPDGSVFSLPYEDVMPQPLEISDASFVGQKVYLAQALANDHVTEINFHDQSG PNRSRFQSYKEDVRDLYSTSADITELPLAKVNLRLMLEHEDRSTYAALPIARIADKRPDG SILLDHEFIPSCLSISSTPRLKSFLSEISGLVNERAKNLAERIGSPNQQGVADVAEFMLL QMLNRVQPQLQHLTHRATLHPEPLFHELIGLCGEIMTFTDASRLPIDTPVYRHDDLQHSF APLMLALRQALSTVLSPRAVSLQLREQRFGVFVAVVGQVELLQEAEFVLAIRANMPLEVL SKQFIQQSKVATPEKIMQLVGSHTQGIPLRLLTSTPRQLPYHSGYLYFSLDRQSPHWPEL AKNSGFAFHIGGKFPNLDMQFWAIRR >gi|316918893|gb|ADCU01000013.1| GENE 187 224326 - 224835 485 169 aa, chain - ## HITS:1 COG:YPO3596 KEGG:ns NR:ns ## COG: YPO3596 COG3521 # Protein_GI_number: 16123738 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 168 1 181 181 149 49.0 3e-36 MSAWRKYLIVSITVILLGGCSKGPWFGKEVPDATKLPSTLGLTLLADKDINPNGENVASP LAFQVILMSEDSKLLAADYDQLTAKEMKDVLGKNYIDHQDFTLLPGQYKYIQPTELDSKV RYVGIAAYYSQPNGAQWKKVLKLAPIGHNYQVLVHLHKADVDMRKESED >gi|316918893|gb|ADCU01000013.1| GENE 188 224832 - 226121 516 429 aa, chain - ## HITS:1 COG:YPO3595 KEGG:ns NR:ns ## COG: YPO3595 COG3456 # Protein_GI_number: 16123737 # Func_class: T Signal transduction mechanisms # Function: Uncharacterized conserved protein, contains FHA domain # Organism: Yersinia pestis # 1 422 1 432 438 243 35.0 8e-64 MDTFSPSSAKLTLYIKDVKTLRASVERMHSFTTDGGSFGSEPSGIGNHWQLQDSAMKVRA LNANIVWNDGQFCLQDLIGNCLINNSVHGCPPEKLIALAQGDTITIGDLILTAHLQLTAH SQSAPDYLQLQNILSTEATNNVNRVIDEPTSVSASQHHSYLPSQESAMHPYEPSTLGLSR NSVADNSATSLLDNPFPHRVEPPLTSQEEHMMDDEYLDVPAPYAPSASALDSNADIFENV ALTPVLRGLGEFLPFRNSQVANEFLEEAGRTLQAVVKGLLALNQTQQVANKQLQPIEDNP LRLGLSFQETVAVLYGEQKSQVHLTPSSAVTESLTHMRLHYQASSQATDAALSAVIQSFS PDVLITRFQRYRRDHMVNPSDPNWIWNMYQHYFNELLSGRQIGVEKLFHEVYEQVYDKTL RQLQEEEAR >gi|316918893|gb|ADCU01000013.1| GENE 189 226144 - 227106 285 320 aa, chain - ## HITS:1 COG:YPO3594 KEGG:ns NR:ns ## COG: YPO3594 COG3520 # Protein_GI_number: 16123736 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 6 320 24 349 349 359 53.0 4e-99 MTELTNIRDYDFYQLVELLYQIEGQHVEMRPARAPKDEFIRFSSNASLGFPSSDVVSLEK IESTYALEVAFLGLHGSQSPMPGYYLERLAWEYAQKDGNLYHFLDFFNHRFLMLLHLAWR KYRYHVRYRADGQDGFSQMMFSLVGLGSSALRDVIPVNHSKMLAYAGLLAAPGRSPAVVA GLISHCFDLATVDVTSWEYRRVAIAPHQQNRLGGVNSDLRGNFVIGDYAPDVCGKFTLCI NELSHDHFLRFLPNGDLYQPLVTFVAFILRDQFAWDLQLGLADKQFEPTCLGNDKGCLLG WTTFLGQPPEVPLVTIGVQE >gi|316918893|gb|ADCU01000013.1| GENE 190 227103 - 228878 658 591 aa, chain - ## HITS:1 COG:VCA0110 KEGG:ns NR:ns ## COG: VCA0110 COG3519 # Protein_GI_number: 15600881 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 1 591 1 589 589 573 47.0 1e-163 MKLEDYFRDELSYLRQQGEVFSQAWPQLTRFLSEQSTDPDVERLLEGFAFLSGSLRAKIE DEFPELTHGLLNMLWPNYLRSVPSMTIVQYTPKLQAISEAAYIPENVLLGSKSVDNISCQ FSTCRGAWILPLELHEIFSNNSNENGTLTLALKTFGALPLRQVQLDKLRIYLGNNHHSAT QLYLWLQQHLHHTSVHLDGVEFDIPHLDVLPIGFENTDALLPYPKNIYPGYRILQEYFCF PEGLFFLDFSGFDSLPQNTPIEKIDISFHFDKPLPLDIKIHSDSIKLHCVPAVNLFPYHS EPLQLDGRSVSYPLRVSHSSPELYEIFSVQKVEGWLTKHGHEQRDKTRPARIYHPFESFR HQIEYEQDRSARYYHLSVRNALKMDGFEHDITFVRGDESLVTDNEETISTRLLCTNRLIP TKLDIGDVNVGYSDTPPFVTFQNITHPTMPLRPIMDGSLQWTLVSNLSLNYLSLLDKDAL LQIIRNYDFPAMNDQQASRVSQKRFAGIERLETSPVDRLIKGRPVRGIQSTLYMRQSAFS CEGDMYLFGSVLARFFALFASVNAFHELTVVNTDTQANYRWPLQLGCRPLI >gi|316918893|gb|ADCU01000013.1| GENE 191 228891 - 229319 168 142 aa, chain - ## HITS:1 COG:YPO3705 KEGG:ns NR:ns ## COG: YPO3705 COG3518 # Protein_GI_number: 16123843 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 139 1 140 146 130 50.0 6e-31 MSALTPWRRTRACSLFGRIDEEVSAKPFDKTSDLLVSLKQNLNAVLNSRPGCCQSSPTLG VIDFNDATGTSVDISASVCLAIQQCIENFDPRIKSVDVATFNNENDPLTLFFQVKAHIHF EDIDSVVNFNIQLDDNSRYQLR >gi|316918893|gb|ADCU01000013.1| GENE 192 229323 - 230252 616 309 aa, chain - ## HITS:1 COG:YPO3706 KEGG:ns NR:ns ## COG: YPO3706 COG3517 # Protein_GI_number: 16123844 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 309 185 493 493 551 81.0 1e-157 MAHAPFLSSVAPSFFGLNSFTELSAIKELKAVFEGPAYVKWRALRETEDSRYIGLTAPRF LLRLPYDRNDNPVKTFNYEEDVNADHEHYLWGNTAYLLATNLTDSFAKYRWCPNIIGPQS GGGVSDLPVHVYDSMGQLQSKIPTEVLITDRREYELAEEGFITLTMRKGSDNAAFFSANS VQKCKVFPPTREGKTAETNYKLGTQLPYMFIVNRLAHYIKVLQREQLGAWKERQDLQREL NQWIRQFVADQENPPSEVRSRRPLRGATIEVSDVDGDPGWYQVSMSVRPHFKYMGASFEL SLVGRLDKD >gi|316918893|gb|ADCU01000013.1| GENE 193 230222 - 230806 379 194 aa, chain - ## HITS:1 COG:YPO3706 KEGG:ns NR:ns ## COG: YPO3706 COG3517 # Protein_GI_number: 16123844 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 14 184 13 183 493 279 78.0 3e-75 MSLETEIETSGTEERAFAPSLLNEIMAQTRLAPGDDAYDIAKQGVSAFISNILENGTNNE PINKLLVDRMIAELDKKLSSQMDEILHDSRFKDLESSWRSLKLLVDRTDFKENIKIHILH ATKSELLDDFEYSPEISQSGFYKHVYASGYGQFGGEPIAAVVGSYAFNQSSADMKLLQYV SSVGRWHMLLSSLP >gi|316918893|gb|ADCU01000013.1| GENE 194 230863 - 231372 361 169 aa, chain - ## HITS:1 COG:YPO3707 KEGG:ns NR:ns ## COG: YPO3707 COG3516 # Protein_GI_number: 16123845 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 161 1 161 165 187 65.0 1e-47 MNKKSEGSVAPKERINIKYVPSTGEQHDEVELPLNLLVIGDLKGTTEELSIEERPAVSID KYNFSSVMREAGLKLDMDVPNRLDENSKENMRVRLEFESMVDFTPDQVAHHVPELNKLLE LREALVALKGPLGNIPAFRSRLQSLLSDESIREQLLSELNMTLPSGADK >gi|316918893|gb|ADCU01000013.1| GENE 195 231739 - 232713 822 324 aa, chain + ## HITS:1 COG:yajO KEGG:ns NR:ns ## COG: yajO COG0667 # Protein_GI_number: 16128404 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 324 25 348 348 464 67.0 1e-130 MKYIQFGSTELYVSRLCLGCMTYGEPSRGNHAWTLPEESSLPMLQQAYEAGINFFDTANS YSDGSSEEILGKAIKKFMSRDKIVVATKVYFPLSNLEGGLSRQSILKSVDDSLQRLDLDY IDLLQIHRWDYDTPIEQTLEALNDVVEAGKVSYIGASSMHAHQFAKALAVSEQNGWARFV SMQDQYNLIQREEEREMHPLCEKENIAVIPWSPLARGRLARPWGETTARLVSDEVGKKLY DATDEADSQIAERVSAIAADHGVSMAQIALAWLLSKPVVTAPIIGASRASQLEDAIAALD IELKSEEIAELEMAYQPHEQTGFE >gi|316918893|gb|ADCU01000013.1| GENE 196 232805 - 233326 354 173 aa, chain - ## HITS:1 COG:YPO3179 KEGG:ns NR:ns ## COG: YPO3179 COG1267 # Protein_GI_number: 16123341 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Yersinia pestis # 12 169 4 161 161 256 82.0 1e-68 MAKISKYDSKAAKARLRMSNPWHLLATGFGSGLSPIIPGTMGSLASIPFWLLLIQLPWQL YSLIVMFSICIGVYICHRTAKDMKTHDHGSIVWDEFVGMWITLMALPVNSWQWVLGGFLV FRVLDMWKPWPIRWFDRNVHGGMGIMVDDIVAGVLSAVIIYVIGHHWPIALFG >gi|316918893|gb|ADCU01000013.1| GENE 197 233313 - 234290 945 325 aa, chain - ## HITS:1 COG:YPO3180 KEGG:ns NR:ns ## COG: YPO3180 COG0611 # Protein_GI_number: 16123342 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Yersinia pestis # 1 322 1 322 329 496 75.0 1e-140 MACGEFDVIARYFNRHRTARRDVQQGIGDDCALLSISEKQLIAISTDTLVSGIHFLPDID PADLGYKSLAVNLSDLAAMGADPAWVSLALTLPEINEPWLERFSDSLFEQLDYYGMQLIG GDTTRGPLSITFTINGLVPAGRALLRSGARIGDWIYVTGTLGDSAAGLAILQNRLTVADE DERNMLIQRHLRPHPRVLQGQALRDLASSAIDISDGVISDLGHILKASDCGANLYLDDLP LSACLTNNTTPDQALQWALSGGEDYELCFTVPEMHRGALDVALGLLGADFTCIGQIAPAA DGIRFWRGNDQVELDFQGFDHFGKD >gi|316918893|gb|ADCU01000013.1| GENE 198 234428 - 234847 496 139 aa, chain - ## HITS:1 COG:YPO3181 KEGG:ns NR:ns ## COG: YPO3181 COG0781 # Protein_GI_number: 16123343 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Yersinia pestis # 1 138 1 138 138 220 90.0 5e-58 MKPAARRRARECAVQALYSWQISKNDIADVEYQFLSEQDVKDVDISYFRELLSGVATNAE YLDGLMAPVLSRQLEELGQVERAVLRISLFELSKREDVPYKVAINEGIELAKTFGAEDSH KFVNGVLDKVAPTIRKSKR >gi|316918893|gb|ADCU01000013.1| GENE 199 234868 - 235338 563 156 aa, chain - ## HITS:1 COG:YPO3182 KEGG:ns NR:ns ## COG: YPO3182 COG0054 # Protein_GI_number: 16123344 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Yersinia pestis # 1 156 1 156 156 233 87.0 7e-62 MKTIEGVVAAPQARIAIAIARFNNFINDSLLEGAIDALKRIGQVSDDNITVVWVPGAYEL PLAVRALTDTNRYDAVVALGTVIRGGTAHFEFVAGECSSGLASVAMNSVVPVAFGVLTTE SIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA >gi|316918893|gb|ADCU01000013.1| GENE 200 235511 - 236632 899 373 aa, chain - ## HITS:1 COG:YPO3183_2 KEGG:ns NR:ns ## COG: YPO3183_2 COG1985 # Protein_GI_number: 16123345 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Yersinia pestis # 149 373 1 225 225 316 69.0 6e-86 MHNQPRGDEFYMARAFELARRGRFTTTPNPNVGCVIVLNDEIVGEGYHLRAGEPHAEVHA LHMAGDKARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPNVAGRGLFKL QQAGIDVSHGLMMNEAEAVNRGFLKRMRTGFPFVQLKMAASLDGRTAMASGESQWITSAA SRQDVQRYRAQSSAILSSSATVLADDPSLTVRWDELDVTTQQAYPRENLRQPLRVIIDSQ NRITTEHKLISQAGETLLARIHPDDLHWPENVKQLAIPQYGQGIDLVVLMMQLGKLQINS VWVEAGASLAGALLQAGLVDELIIYLAPKLLGDAARGLCVLPGLEQLADAPQFVFSEVMP VGPDLRIVLRNAY >gi|316918893|gb|ADCU01000013.1| GENE 201 236674 - 237123 397 149 aa, chain - ## HITS:1 COG:STM0415 KEGG:ns NR:ns ## COG: STM0415 COG1327 # Protein_GI_number: 16763795 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Salmonella typhimurium LT2 # 1 149 1 149 149 258 88.0 4e-69 MHCPFCSAVDTKVIDSRLVGDGTQVRRRRQCLVCNERFTTFEVAELVMPRVIKSNDVREP FNEDKLRSGILKALEKRPVNSDDVEMAISHIKSQLRATGEREVPTKMVGNLVMDALKKLD KVAYIRFASVYRSFEDIREFGEEIAKLQD >gi|316918893|gb|ADCU01000013.1| GENE 202 237439 - 237972 339 177 aa, chain + ## HITS:1 COG:no KEGG:Dd1591_3093 NR:ns ## KEGG: Dd1591_3093 # Name: not_defined # Def: hypothetical protein # Organism: D.zeae # Pathway: not_defined # 1 174 1 173 189 120 36.0 2e-26 MSIYRPLFVLAPLALMLTACASDPKTEALQSEVQELTQKVQKLSTEAEYLERQKAMNENN EQSIYLIPAANSDAVGVTSIGQLRLLISHLEPEADGSKAVLQIKTANGSILPSFTGSLEW GSLNQATLEPDQSSTLSQSISFKSPATPTNVTSMEVRLSDIAPENLGFIRLSGIERQ >gi|316918893|gb|ADCU01000013.1| GENE 203 238056 - 239027 983 323 aa, chain - ## HITS:1 COG:ECs0460 KEGG:ns NR:ns ## COG: ECs0460 COG0341 # Protein_GI_number: 15829714 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 534 84.0 1e-151 MAQEYSVEQLNYGRRVYDFMRWDYWAFGISGFLLLLSIIIIGVNKFNLGLDFTGGTVIEV SLEKPADMDMMRDALKKAGFVDPLLQNFGSSRDIVVRMPPATSEASGEALGSKVISVINE ATSQNATVKRIEFVGPSVGEDLAQHGAMALLVALIAILIYVGVRFEWRLAAGVVISLLHD VIITLGVLSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVS LTQTLHRTLITSGTTLMVILMLYLFGGPMLKGFSLTMLIGVSIGTISSIYVASALALKLG MKREHMLQQKVEKEGADQPSILP >gi|316918893|gb|ADCU01000013.1| GENE 204 239038 - 240861 1776 607 aa, chain - ## HITS:1 COG:STM0407 KEGG:ns NR:ns ## COG: STM0407 COG0342 # Protein_GI_number: 16763787 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Salmonella typhimurium LT2 # 1 607 12 615 615 955 83.0 0 MLILVIAIGLLYALPNLYGEDPAVQITGARGVAASETTLVQVRDELEKQHIASKSIALEN GAILARFKDTDVQLRAREVLMDMLGDKYVIALNLAPATPRWLEAIGAEPMKLGLDLRGGV HFLMQVDMETALSKLQEQSMDMLRSDLREKGIPYSTIRKTDGSTNGVIITFRDAETRDKA SSYLSPRYLNNLVFSKVGDNGLKAVMTDQRLQEAREYAVQQNINILRNRVNQLGVAEPLV QRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSNADSTAAANGRVPGDSEVKYTR DGRPIVMYKRVILTGDHITDSTSSQDEFNRPQVNISLDGAGGSAMSNFTKDNIGKPMATL FVEYKDSGKKDASGKSILAKQEEVINVATIQSRLGNSFRITGIDNPNEARQLSLLLRAGA LIAPIQIVEERTIGPTLGAQNITQGLEACLAGLIISILFMVFFYKKFGLIATSALLANLV LIVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRSVQQAINEGYQG AFSSIFDANVTTLIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIIGTRAIVNLLYGGK RINKLSI >gi|316918893|gb|ADCU01000013.1| GENE 205 240922 - 241254 401 110 aa, chain - ## HITS:1 COG:ECs0458 KEGG:ns NR:ns ## COG: ECs0458 COG1862 # Protein_GI_number: 15829712 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 184 88.0 3e-47 MSLFISDAVASAGAPAQGSPYSLVIMLVVFGLIFYFMILRPQQKRAKEHKKLMDAISKGD EVLTNGGLIGRVTKVAETGYIAIALNDTTEVIIKRDFVTAVLPKGTMKAL >gi|316918893|gb|ADCU01000013.1| GENE 206 241421 - 242548 909 375 aa, chain - ## HITS:1 COG:YPO3191 KEGG:ns NR:ns ## COG: YPO3191 COG0343 # Protein_GI_number: 16123353 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Yersinia pestis # 1 372 1 372 374 737 92.0 0 MKYELDTTDGRARRGRLIFDRGVVETPAFMPVGTYGTVKGMTPEEVKETGAQILLGNTFH LWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGKMRKIKEEGVHFRHPINGSPI FLSPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKSSMEMSLRWAKRSRQRFDELGNKN ALFGIIQGGVYEDLRDVSLKGLVEIGFDGYAVGGLAVGEPKEDMHRILEHVCPQIPEDKP RYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTNGIVKIRNAQYKDDTTTLDA ECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAGLRQAIEDGKLEEFVAD FYGRQGKPVPPVGAK >gi|316918893|gb|ADCU01000013.1| GENE 207 242760 - 243137 216 125 aa, chain - ## HITS:1 COG:STM2230 KEGG:ns NR:ns ## COG: STM2230 COG1974 # Protein_GI_number: 16765558 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Salmonella typhimurium LT2 # 1 125 39 167 167 111 42.0 3e-25 MAFPSPAADYVEKPISLDEQFVKNPASTYFMKCPDYCPSAGLLKDALLVIDSLKRPVHGS VVVAEVCGEFVLRRLLTMPVPCLAKLENYDDVTFTDEETGFEIFGVVTYVVNDMSMSEFD DNPCM >gi|316918893|gb|ADCU01000013.1| GENE 208 243453 - 244070 133 205 aa, chain - ## HITS:1 COG:no KEGG:Kvar_2586 NR:ns ## KEGG: Kvar_2586 # Name: not_defined # Def: transcriptional regulator, LuxR family # Organism: K.variicola # Pathway: not_defined # 5 196 2 192 206 66 27.0 5e-10 MPAEIKVYLEDANQAYSSGVWCLLEEIFTEDMGMLLKRIDGVSATVALRDADIYVTPFSA GIDRICAYMFSHHKKNFLLIGISIGQNLPIVENLFPCLQGSVFIRRTDSVEQVRHKVSQA WTMSNEKKEEKCRSCRRLLLTAGEKRVIYYLDKGFSVSQIGNILGIGMKMASQRKRKVMR RYNLHSDVELWNFLNKWREYLIPAE >gi|316918893|gb|ADCU01000013.1| GENE 209 244226 - 245479 776 417 aa, chain - ## HITS:1 COG:no KEGG:PMI1909 NR:ns ## KEGG: PMI1909 # Name: not_defined # Def: hypothetical protein # Organism: P.mirabilis # Pathway: not_defined # 263 410 10 157 180 165 56.0 3e-39 MSLYETGTITGALNSTTISGTGTKWSDPKIGITNGSVLFVSSSAGMDGVYQVKRVINDTS IELAQPIYKAFTHSKYSILVAEASSTASFANQLAAALGYYQAQIDGWQQIMTGTGDIVLN APDGTKVTIKSFTKMSQDIDKKQDKSKILTDISNSKDADGVREYLGLKEALIKGDFGAGG DAPHVSVIQTQFDSGIYAYWGDNSDINYGYKYGVVFNAVYAAATYKRTFQIFIDSTLGIT ARHYNQNTGNESSVVLYTTGNTTKASDGTLKAASPIVKIFSDGAFETNAESLGVNVHREG VGAYRITNVLGMNSDGTWGGVDGGFDVPKDRNGQRLIWLDYEVEADGSILVKTYHRTYPD APVFARNIKEGYEEGDLIDIPSDQFVSVRVEMPQDSIWNLAQKAAQEEMKQEKTTEE >gi|316918893|gb|ADCU01000013.1| GENE 210 245525 - 246187 361 220 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAFVVELKNAKGHTIYDTSLRNFSLISRQRVTVPPPQNGGVEITIPNPETTIPFVRIEGN YESNVCLIGGVVGNKLSLTLAPPASGSAAVTSKIAIIYFMGVGTTGIVPEYGAVIRSASG AVEWSSLDNPLFIRTMAIADAHATPNASMISGRPIAVCPAITGTIQRNRGGIAFSVVTGF ANGLRSQAFGNFSGSGVWHWSTMVSPRLDYQVYIETDYMD >gi|316918893|gb|ADCU01000013.1| GENE 211 246189 - 246488 107 99 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGSYGVFAYNAKGVETSAIDGRSFFLDSIGISGANANGSKSYPSVNLNIYKLTYAISGSG GSSGAYIHAKINGNKITWNSVVQDAKYITGYIFVCLVEI >gi|316918893|gb|ADCU01000013.1| GENE 212 246488 - 249880 1624 1130 aa, chain - ## HITS:1 COG:YPO2131 KEGG:ns NR:ns ## COG: YPO2131 COG4733 # Protein_GI_number: 16122366 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Yersinia pestis # 8 1128 6 1066 1067 1150 53.0 0 MRGIMQLIQGNKGGGGSGRQPSESPDSLQSVARAKILLALAEGELGGTLDGKHIYLDGTP IINADGSNNFPGVTWEYRPGTQAQTYIKGIPSVENEITINTELKQSQPWIRAINNTQLSA VRIRLGFPALQQQKDNGDLIGYRVEYEIDLAIDGGAYETVLKTAVDGKTTTLYERSHRIN LPAANTGWQVRIRRLTADSTSAKIASKSTIEAIAEVIDAKLRYPNTALLFVEFDSKLFAN IPKISCRPDGRLIRVPTNYDPKMRTYSGSWDGTFKFAVSNNPAWVLFDLIIEKRFGLGRR LTIAQVDKWELYRIAQYCDQMVPDGRGGDGVEPRHMCDVYIQSQADAFTVLRDVAGIFRG MTSWMNNQLSVIADMPRDVFRNFTHANIVGKINYVGGSQRNRVTQALISWSNPVTNYQDE IEAVSDMALMRRYSVNQIELSAIGCTRQSEARRSGLWAILTNSKDGAASFTTGLEGQLPM PGYIIGLPDQRRSGRVYSGRISSVNGRNIKLDRKPDAKAGDRLQINLPSGSLQARTITAI NDAVVTVSIAYTETPEPEAIWGIEADDLAIQLYRVISIEDNNDNTFNISCIEHDPDKYAR IDTGAKIDERPITVIPPGVQAPPANIQITSYSIVNQGIAITTMHAGWDAVPNAIAYEAEW CKDNGNWISVPRSSVTSFDVPGIYAGRYLVRVRAINASDISSAWATSLEVHLKGKEGAPP KPLNFKADPLVFGIALSWLFPQGAEDTLKTEIQYNTAPTEEGVMLLSDIPYPQRSYQQMG LSAGQSFFFRARLVDKSGNQGDWIDWVLGESSTDVDWIADEVKKELEQSEAFKEIDKNLT DSNAKLQDAAEAAIQNALANDADVRRWMAQNGDRKAEITETQQLVADETEARATAVTQLK TQTDKTSSDLTEFRETVAKDNEATAQKITQLNSKTDTTNSNITALEKTVADSDKALSEKI TGLTSTVGENTAAIQVRGQTIFNKDGTGSSVYSMGAGITYKGKYYAAGLSIGAEVNAAGT VSTRILASADQFAVLNPATNGYTLPFFIQGSQTFIVSALIQDASITNAKIGSYIQSNNYV AGKAGWRIDKNGVLEMNSALPGGGRSVFDSNGMAVYDQNGVKRFAAGYKP >gi|316918893|gb|ADCU01000013.1| GENE 213 249924 - 250565 477 213 aa, chain - ## HITS:1 COG:YPO2129 KEGG:ns NR:ns ## COG: YPO2129 COG4723 # Protein_GI_number: 16122364 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Yersinia pestis # 6 212 7 205 206 197 58.0 9e-51 MSELDEELKTIRLYGVLGTTFGRVHRLAVRTPKEAVKALSVVIPGFEAFMNSSTQRGIEY AVFKGKKNIGESELTDNSGSLEIRIAPIITGSKRGGIFQTVLGVALIAVAGFMTNGAAVG LLGSAGFAISGAWGTAALVGASMAIGGVMQMIAPQPTGLSMRESPDNKPSYAFGGPVNTT TQGNPVGVLYTQDNNREIGGAIASAGIYAEDQQ >gi|316918893|gb|ADCU01000013.1| GENE 214 250565 - 251296 272 243 aa, chain - ## HITS:1 COG:YPO2123_1 KEGG:ns NR:ns ## COG: YPO2123_1 COG1310 # Protein_GI_number: 16122358 # Func_class: R General function prediction only # Function: Predicted metal-dependent protease of the PAD1/JAB1 superfamily # Organism: Yersinia pestis # 1 130 1 123 123 170 63.0 2e-42 MQDKTLAAIMAHAKQAYPLECCGIVAQKSRVERYFPCRNILPSNEKKKEGPEYGFILAPE DYATAEDWGTVTAIVHSHPDATTQASERDKNLCDETNLPWVIASWPEGDIRTIYPRGDRP LVGRQFDLGHADCWSLIRDYFRMNHEIELPNYSVEHHWWEDGHDENFYHDCWFECGFREF EGPTREGDMVMMQVQADKWNHAGILVENGMLLHHLYGQLSQRVPYGGYWVDRTMKVVRYK DLM >gi|316918893|gb|ADCU01000013.1| GENE 215 251301 - 252056 265 251 aa, chain - ## HITS:1 COG:YPO2122 KEGG:ns NR:ns ## COG: YPO2122 COG4672 # Protein_GI_number: 16122357 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Yersinia pestis # 1 251 1 250 250 354 66.0 1e-97 MEITSDVQKLEPGNRIRLIEVDGEAFNAGILRFHNDTIPHTPEEIATASGDESKLKAKSI WWQGKEYGAWPCELSGLSYSTDGTAAEPKLTVANLDGTIGAMCIAYQDMVQAKVTVHETF KHYLDARNFPEGNPEADPEQEFTQVFFIDSRSGENDEQVEFTLSSPIDLQGLRIPTRQIH SLCQWAMNNEYRTGIGCSYAGQNGMFTMDDKPTDDPSQDACSGCLSSCKLRFGEMAELDF GGFPGSSLIRR >gi|316918893|gb|ADCU01000013.1| GENE 216 252120 - 252461 129 113 aa, chain - ## HITS:1 COG:YPO2120 KEGG:ns NR:ns ## COG: YPO2120 COG4718 # Protein_GI_number: 16122355 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Yersinia pestis # 1 113 1 113 113 167 72.0 5e-42 MAIEKFTWRTQGQPEGSFNQRVRTAKFGDGYEQVAADGINPEQQSWALSFSGLEKEMMPI LSFVRRHVIKSFIWTPPYGRQGLYRIASDSIRATPVGGKTMTVSATFEQSYAP >gi|316918893|gb|ADCU01000013.1| GENE 217 252526 - 252894 151 122 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAVGLIGCYFYVNSVDEQALIDEAKNRVLLEITTPDRIEFSGLQFLPNDYAADEKISGSV CGFIDAKMPDGTYAGKIKVAVRVKSNGENIMAGRALIALIGLPDSYRYEAKWQELCKGYE PE >gi|316918893|gb|ADCU01000013.1| GENE 218 252924 - 253217 176 97 aa, chain - ## HITS:1 COG:no KEGG:YPK_3118 NR:ns ## KEGG: YPK_3118 # Name: not_defined # Def: phage-related membrane protein # Organism: Y.pseudotuberculosis_YPIII # Pathway: not_defined # 1 97 1 87 176 108 56.0 4e-23 MDFIALLVLFAAFGLIPAFIAEQKGRSFGLWWFYGFMLFIVALIHSLCLNAIPKEKTAEV LELEEKARLAEMKNCPFCAEPIKREAIKCKHCGSDLS >gi|316918893|gb|ADCU01000013.1| GENE 219 253275 - 256310 1777 1011 aa, chain - ## HITS:1 COG:YPO2119 KEGG:ns NR:ns ## COG: YPO2119 COG5281 # Protein_GI_number: 16122354 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Yersinia pestis # 135 1004 239 1157 1167 518 39.0 1e-146 MSDEIGKISLVADTSSLERAANELDKFSASSNKAATAADSLNDSNAQTSAKVKDVNAAFT AGAAVREQTRRSYEGTTKELQGLQRELVAIRGRVDPVGVAFDNLAAMSDKLREGLRQKLI DPSDYAASVKGIDNLTSALERSVYESSAAGKAAKEAAQADKVATVAKESFISRLREQAET QGKTNSEIMAYRAAQLGATKEAAPFIASLKQQEDAWKKGTISAGQYRQAMRQLPAQITDV VTSLASGMPIYMVAIQQGGQIKDSFGGIGNAAKALISQLTPMRLLVSGITVSAVAMGLAY YQGAKESQEFNKQLILTGNYAGVTTDRLNDMAKTISKSGGTQGAAAAALAKVVGTGAFGA NQLESVTRSALAMEKATGQSVDATIENFKRLKEDPLRAAQDLDKQLHFLTATQLESITKL SETGNVTAAARVAMDAYADTMQQRAADVTDSLGYLETGWNSIKSIASSAWDAMLGVGRED TIEDKIERLQKASKARALGMADVNVGVDTSAEIATLQEEKFQRDIKVAKDKAEQNEQDRQ KREYNATQALNKKYETAEEKHQRTLLEIRSGYASKEAKDAAIKRENIEFAEAQARKTKRP KAAKAITDDAATKELAASQQRLAVLRGQSEATDKMIQQESRLLEFNQQIADLKNKSILTA DQKSLLSRESEIRASLQLEANIAKENAQREKAVKAMKTMSDYAKEIEERNQQAKDSFGQT TKGTQREAQESQLKKTYNKSLEGITDAAQLEKIAAEYVRARDKLHEGFRDEDARESDWIS GLNLGINQFAENSLNVFQATAQIGQTTMQSLSDMATDLASTGKANIKEFGTSILKMILQV INQLLVAYAIQSALGWMSGGASFSSTGLNDGTKGIPMPPKFDAGGYTGDGGKYEPKGIVH GGEFVFTKESTSRIGTDNLYALMRGYANGGMVGGSSTGRAPMLGLQGGGSASGPTIQTTV TVNTEGGQQQQGGNSDAIGKAYQQVIDVSIKDGISKALRPGGLIWAAQNKR >gi|316918893|gb|ADCU01000013.1| GENE 220 256634 - 257179 419 181 aa, chain - ## HITS:1 COG:HI1412 KEGG:ns NR:ns ## COG: HI1412 COG3646 # Protein_GI_number: 16273319 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Haemophilus influenzae # 3 174 2 171 173 83 32.0 2e-16 MNNLQAIPDFDFRQLVSAAEGEPVTDTFQIAKAFGKRHQHVIRALENLHCSADFTKAHFW VVEKINELGIFDKKQKYYRMDFSGFVMLVMGFNGAKADAVKEAYINAFNWMTSELRKYSE SYEAERNAVMLEYMKEKDVASMSGRLLNRWGRVKKPALLAKIERIEQKSQITIPGLPDKA A >gi|316918893|gb|ADCU01000013.1| GENE 221 257690 - 258043 376 117 aa, chain - ## HITS:1 COG:no KEGG:YE2315 NR:ns ## KEGG: YE2315 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 117 1 103 103 80 40.0 2e-14 MAKKVCFNPNPTFSIPVMIPRAGDDDGELIITFKNKQRAELEALEKALSEKLAAQREENK FTNEPTADYLMEICQGWELPEEFNRDNVITLLENYARAFDSISSAYTREMMAIREKN >gi|316918893|gb|ADCU01000013.1| GENE 222 258176 - 258826 490 216 aa, chain - ## HITS:1 COG:YPO2116 KEGG:ns NR:ns ## COG: YPO2116 COG5492 # Protein_GI_number: 16122351 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Yersinia pestis # 1 216 1 217 306 200 56.0 2e-51 MGFALPNGSHVYLAKTYAEAETVTAATNAAETVFTTAEATKAKAGDIIHIRSAWPGLDEV IARVKEASESSVTLEDINTLNTGDFAAGGGAGSFRVIKSWEEMSQITEVASSGGEQQSIQ LQFLSDTTQRNVNTFKTARVQTYTIAHDSSLPFYDLLRQADSSQDTLAAYMFVPKAKENR YWSAKASFNDIPNTAVNTVETVTATLNLQSGLTAYK >gi|316918893|gb|ADCU01000013.1| GENE 223 258914 - 259375 389 153 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAEIKIKIDSSDIDAAIAKVSHLLELVERLPTGMLQESFTASQDKVFISEALIKHNGFNL DDVDAILAQSITNSEEFEKIHQVGVAAAGVRGDLTEIEAEMLKQQRDAHHRFDAKLDNIA ASLKVNVQKTAKEAISAACRPGGTIWQVFTNYR >gi|316918893|gb|ADCU01000013.1| GENE 224 259383 - 259796 229 137 aa, chain - ## HITS:1 COG:no KEGG:YE2317 NR:ns ## KEGG: YE2317 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 134 1 134 135 110 43.0 1e-23 MTTQRIIQLFETQLAAVASALKLDIAMENIEFKPSKNIYLRSHVLPAGTDVIDLSGTMKV YKGIFQIDIVAPAGAGKAKAGNIADSIIEAFPNNLELSVGEFTVSVDGEPSRMRALSDST RYLIPISIDYRANVTTG >gi|316918893|gb|ADCU01000013.1| GENE 225 259793 - 260386 398 197 aa, chain - ## HITS:1 COG:no KEGG:YE2318 NR:ns ## KEGG: YE2318 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 193 1 192 194 233 64.0 4e-60 MGLNNQFRDSIKIFVEDSKVNMEEVVRRTGIKILGRLVDMSPVGNPELWAINQTATQYNQ AVFEANEAAMLVPSNLTKTGRLKKKASVSDSMDIKAPSGYTGGRFKGNWQIGLDQEPSGE TGRIDPGGNMTKTVGNATLGLFKVGMKAIFFVNNVHYAYALEVEGHSKQAPEGMIRVVAK DAPAIVNEAIQEVKGLA >gi|316918893|gb|ADCU01000013.1| GENE 226 260388 - 260732 328 114 aa, chain - ## HITS:1 COG:no KEGG:YPO2113 NR:ns ## KEGG: YPO2113 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis # Pathway: not_defined # 17 114 19 116 116 86 53.0 3e-16 MDYEGAQRRLIDAVKRNGIAYPLIRGGGVINENGVEVEVPEVKMDINGLVIAYKLSEIDG SLIQSGDIQLIVTPEKEIRIGDHIEVDGKRYRVEQSNPIKPANVLLAYKPQLRA >gi|316918893|gb|ADCU01000013.1| GENE 227 260738 - 261253 290 171 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTIAFDGKTLAADSLVTYDGMRVGNSEKIVKVIGGMLGSAGNSEDVTAAEAWFNAGRPE QRPILTSYIGIFIPDDGSVPQEYNERLVQMVLPTNSPWVAGTGKCFAMAAMLAGKTAPEA VEIAIKLDIYSGGPVRVYCPPTATMDDSKPYSEDQSLKLGAFPGSALLPAE >gi|316918893|gb|ADCU01000013.1| GENE 228 261253 - 261741 212 162 aa, chain - ## HITS:1 COG:no KEGG:y2204 NR:ns ## KEGG: y2204 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_KIM # Pathway: not_defined # 1 161 26 184 185 204 62.0 1e-51 MITTDPTSPDFNSYASVEDLAAFAVSRSITLPNETEPLLVKAMDYLNGLGWEGQRTEPDQ PLAWPRLGVDFDGRPYPSDKIPRELNTAQCMLAIEAKDGDLLAANRTAAIKRERIEGAID TTYAIADGGSFTPNYPAVDALLSDFLSGGGVGFAINSFSRRA >gi|316918893|gb|ADCU01000013.1| GENE 229 262072 - 263031 989 319 aa, chain - ## HITS:1 COG:YPO2110 KEGG:ns NR:ns ## COG: YPO2110 COG5492 # Protein_GI_number: 16122345 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Yersinia pestis # 1 314 1 314 401 486 79.0 1e-137 MSSTVNSDLIIYNDLAQTAFLERRQDNMDIFNTSSNGAIVLDNALIEGDFKKRTFYVLGG SIEARDVNSVAKVNTKKIGAGEAVGVKAPWKYGPYATTEEAFKRRGRSVDEFSSVVGVDA ADATLEGFVKYGLQALAAAISSNADMVVTADIATDGKKTLTRGMRKYGDKFGRIGLFVMH SASYFDIVDEAITNKIYEEAGVVVYGGLPGTLGKPVLVTDTAPIDAIFGLLPNAVTITES QAPGFRSYEINDEENLSVGYRAEGTVNVELLGYSWVESAGGANPDLTKIGDKANWKKHAK DNKVTAGVMIKLQAAGAGE >gi|316918893|gb|ADCU01000013.1| GENE 230 263034 - 263813 545 259 aa, chain - ## HITS:1 COG:no KEGG:YPDSF_1020 NR:ns ## KEGG: YPDSF_1020 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Pestoides # Pathway: not_defined # 1 255 1 256 257 298 66.0 2e-79 MLYRNLFLKYYAPAGEGEQGGAGGVEITPEIQAIIDQQVADKVSGLKNKNNELIGAEKTL KQQLAAFEGIDPVAVRSILQRFSNDEEAKLISEGKIDEVLTKRTDRMRGDFDSKLKAASE RADKAESISKRYCDRVLGDAIRSAALKAGALPGATDDFIYRSKGMFTLSEDGEAVAVDKD GNVMLGKDGKTPLSPLEWAESLKETAPHLWAAAAGTNAGGHKPPSGALDRATMTQKQKTE YIRTNGREAYLRLPKSKEQ >gi|316918893|gb|ADCU01000013.1| GENE 231 263927 - 264268 236 113 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTKIDICLRKFHKISGGVIYSADMHYVIMAGDRLIHKNEVFGKTEEYHTTFLVEDVPMDS IKLIYGCDSDYATLTANIVSESASRINDHIYAIAEPTYTPIPCVRVGYRGSTA >gi|316918893|gb|ADCU01000013.1| GENE 232 264303 - 265415 627 370 aa, chain - ## HITS:1 COG:no KEGG:YE2323 NR:ns ## KEGG: YE2323 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 370 1 370 370 472 59.0 1e-131 MPTVNEKLDTETIAHLLFVSRYSTGAAKKMVKILDKSDKELSAALLMALEDLDPDSFTVK RLESLLGDVRKINDAATKGMLDGLLAEINGFAEYESGYQLDLFNTIIPKDILSHIPLMGI SYEQVYAAAIAQPFQGRLLKEWASNMGSDRIRRITNAVRSGYLGGDTVDTIVRRIRGTKA ADYTDGVLQIGRANAASIIKTAISHTAAIARNKFAQNNSDLITAKQWSSTIDTKTSAQCR IRDRLRYTLDNKPIGHKIPYLSGPGKIHFCCRSGETFITASWQDLGIKKDELSAATRASM DGQIPAQMSYGEWLQKQSTYRQTKVLGPTRYKLVRDGGMNYDSFYSDKGEWLTLAQLRDI DAKAFEEAGL >gi|316918893|gb|ADCU01000013.1| GENE 233 265448 - 266839 627 463 aa, chain - ## HITS:1 COG:no KEGG:YE2324 NR:ns ## KEGG: YE2324 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 462 1 462 462 637 65.0 0 MTNNDITFTRPEYTAALPLWETERDVCRGPVAVKSRGHKYLPKFEPNNTTAKNNQRNADY LMRAVFYAITGHTKIGLLGLAYRRCPALSIPDKLDYLKTNAEGAGTSIYQQSQETLENIL EIGRHGLYVDYNETDKQSVILAYRAEDIVNWRTARVNGKNKLVLVVLRECIETPDGFGFK DEIQYRELALEGGKFVARVWRKASDAAAVYTAGDYYTPVPFGKNSWDEIPFTFIGAQNND PAIDDSPLGSLVEINLGHYRNSADYEDSVFFCGQIQPWISGLTKEWRDHLEKKGVAIGSR SPLLLPDKGGAAGFLQGQPNMIVKEAMDDKKAYMIALGARLLEPNGAVKTATEASGDQAA ATSVLGICCSNVSEAYTQALKWCARYLGQPEEKINYEISQEFIAKLVDAQIITAIVSAWM NKALPKEDMIRALQKMDIIDPAKDVNDVIDALSVEGPTFVEGA >gi|316918893|gb|ADCU01000013.1| GENE 234 266839 - 268401 683 520 aa, chain - ## HITS:1 COG:no KEGG:YE2325 NR:ns ## KEGG: YE2325 # Name: not_defined # Def: putative phage terminase large subunit # Organism: Y.enterocolitica # Pathway: not_defined # 1 520 1 520 520 976 89.0 0 MSYNVVWKPLPGSQSLSLSCPCDEILFEGTRGPGKTAAQLARFRRLVGTGYGTFWRGVIF DTEYKNLADIITQSKRMYRLFGDGARFLNSASELRWVWPTGEELLFRFGKEEKDYWDYHG QEFPFIGFNELTKQPNPDFYESMFSCRRSSFRPQDYPLPDGSLLPNIPLETFNTTNPFGI GHTWVKKRFIDPAPRGTIIRDKQMVPNPQTQQDEEITLTRVAIHGSFKENPYLDPVYIAT LMNIKDPNKRKAWVEGSWDVTSGGRFDHLWNESLHVIKPFKIPDSWTVDRSHDWGESKPF SNLWWAQSDGTEATLPDGSKFCPPTGSLILIGEWYGCPPDELNKGLNMSSTNVAKGVAWV DKRLMGEEVEEPEETQGKGQMHIVPGICSSVIPGPADGAIFNTGDNELSIAQKMEAQGVT WLAADKKPGSRINGASLFADMLEAVIEGKKTESGMPEKPAFYVMEHCRGWISRIPVLVRD DKKPDDVDTTQEDHDFDATRYRVLHNPPEPAFSISLDTIF >gi|316918893|gb|ADCU01000013.1| GENE 235 268398 - 268979 432 193 aa, chain - ## HITS:1 COG:mlr5477 KEGG:ns NR:ns ## COG: mlr5477 COG3728 # Protein_GI_number: 13474568 # Func_class: L Replication, recombination and repair # Function: Phage terminase, small subunit # Organism: Mesorhizobium loti # 1 160 1 160 199 107 38.0 1e-23 MALTDKQEMFCREYLIDLNATQAAIRAGYSEKTANRIAAKLLSKVDIQNSIAQLKAQRNE QVNIDAAYVLRRLVEIDQMDVLDIVRDDLSLKPVSEWPSSWRRYISGFDLAEMFENTGED GGRELAGIMKKIKWPDKVKNLELLGKHVSVMAFKEQIDQKVTATHNIMPVPTCDSAESWE AIAQKQQGEVLGK >gi|316918893|gb|ADCU01000013.1| GENE 236 269008 - 269238 183 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGNFSIHAGLVNGDLMPIVNENLSSEEVVTRFTGDDTGAPPNSVTIKIKTDSGKQVEVVI PNSSANAYVKVDGSMI >gi|316918893|gb|ADCU01000013.1| GENE 237 269282 - 269476 273 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MALTKEEKMQRLAILGMISELEEKEREEILGLRDKLSSLLKEASKKEFAVAALALMACDI QEEE >gi|316918893|gb|ADCU01000013.1| GENE 238 269479 - 269673 213 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212711509|ref|ZP_03319637.1| ## NR: gi|212711509|ref|ZP_03319637.1| hypothetical protein PROVALCAL_02582 [Providencia alcalifaciens DSM 30120] # 4 60 3 59 62 75 66.0 8e-13 MTDKYSVKATKKDGTTYEGVMTTKEPRLVNGLFAIAEHDGSWTYIQPDELSEITFKPVAE ETQE >gi|316918893|gb|ADCU01000013.1| GENE 239 270120 - 270305 144 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTKSEYNRIDYIEEVMGNAFELLDTGRVAAAKEIIRAVNLQLRVLKRTGEKRYGNPSKAE D >gi|316918893|gb|ADCU01000013.1| GENE 240 270292 - 270696 105 134 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294636151|ref|ZP_06714572.1| ## NR: gi|294636151|ref|ZP_06714572.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685] # 9 129 8 128 138 119 49.0 8e-26 MKNNAEFCDFYCDRVAHAYLLHLVATWRRPIYRYELGDIEVDHTFLSGLLDGYPKDRMSD GYRAKFYSKLLKKFDPTPAKGAVICGGKVPELSKRGIKYMNALVHGFGDMLEDIGDRDEY GLLTIPKGEFNDQI >gi|316918893|gb|ADCU01000013.1| GENE 241 270686 - 270961 193 91 aa, chain - ## HITS:1 COG:no KEGG:SeSA_A0669 NR:ns ## KEGG: SeSA_A0669 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 85 107 193 198 100 57.0 1e-20 MSYSYELQAQVFDHMTEMEAKSGIGFTISQLQHMLAIAKKASDEDSSDAGRRLRKRQDDL VTLKRAEKLIGDISQMALSMVGGGRTISHEK >gi|316918893|gb|ADCU01000013.1| GENE 242 271702 - 271980 305 92 aa, chain - ## HITS:1 COG:no KEGG:YPTB1807 NR:ns ## KEGG: YPTB1807 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis # Pathway: not_defined # 1 85 1 87 146 88 50.0 9e-17 MNFGQALEAVKSGAKIYREGWNGKGQFVIKAGGYTVSEARTGSDYARAGIVGEFNIQPHL DLKNAQGHMQPGWVPSQGDLFAEDWFAEPVSE >gi|316918893|gb|ADCU01000013.1| GENE 243 271994 - 272455 357 153 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2608 NR:ns ## KEGG: Ent638_2608 # Name: not_defined # Def: bacteriophage lysis protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 153 1 153 153 208 75.0 6e-53 MSRVTAIIIAVVVCVIVSLGWAANHYRDNATEYKKQRDEKTQALNLANATIKDMVTRQRD VAALDAKYTQDLADAKKQLDDLQRCVRDGKCGLRVNAKCPTNGATSTGGLGDASGPRLTD SAQRDYFTLRERIATVTKQVEYLQDYINTQCLK >gi|316918893|gb|ADCU01000013.1| GENE 244 272452 - 272928 325 158 aa, chain - ## HITS:1 COG:ECs1622 KEGG:ns NR:ns ## COG: ECs1622 COG4678 # Protein_GI_number: 15830876 # Func_class: G Carbohydrate transport and metabolism # Function: Muramidase (phage lambda lysozyme) # Organism: Escherichia coli O157:H7 # 1 155 1 155 158 277 89.0 7e-75 MQAINPQRKAFLDMLAWSEGTDKPGQPTKNNGYDVIVGGALFSDYSDHPRKLVTLNPKLK STAAGRYQLLSRWWDAYRKQLGLKDFSPASQDAVALQQIKERRALELIDAGDIRQAIDRC SNIWASLPGAGYGQFEHKADNLIAKFKEAGGTVNEPKS >gi|316918893|gb|ADCU01000013.1| GENE 245 272915 - 273226 263 103 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2894 NR:ns ## KEGG: ECS88_2894 # Name: not_defined # Def: putative holin protein # Organism: E.coli_S88 # Pathway: not_defined # 14 103 45 134 134 106 57.0 3e-22 MPNKDPSSYGLVVWVLIAAMSIYGGFVKYIIDTKTNKTAWSWVAAFAQVAVSGFAGLIGG LISIESGLSIYYVLVVAGMSGTMGSVALSFFWERITGMRNASN >gi|316918893|gb|ADCU01000013.1| GENE 246 274053 - 274823 101 256 aa, chain - ## HITS:1 COG:no KEGG:Ctu_11610 NR:ns ## KEGG: Ctu_11610 # Name: quuQ # Def: antitermination protein Q homolog from lambdoid prophage Qin # Organism: C.turicensis # Pathway: not_defined # 1 255 1 253 254 269 54.0 9e-71 MNIESTVKFHSPKSTQISDSPRATASDALTNTDVMCALGMVQSMAPLGFAAFNGKMNISE NDKKRSVQLLTQYGLKHCDKVAALRKLDMNIKVKVVQTLAKFAYKDYCRSAAGTEQCECC KGARVIRSKTMVMKHAGCGKTPPKYAEEVTHTMCQKCNGKGEVSVACCKCNGRGEAVNRE ETERQGVPVKHTCKQCSGRGYERIPAQKAFRAICAHTDAISATVWDKAIKPFYEQLITEL LSSEEGANRELAKVTN >gi|316918893|gb|ADCU01000013.1| GENE 247 275178 - 275540 154 120 aa, chain - ## HITS:1 COG:ECs1619 KEGG:ns NR:ns ## COG: ECs1619 COG4570 # Protein_GI_number: 15830873 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 117 1 117 120 125 53.0 1e-29 MREYRLTLPYPPSLNTYWRHARQRHYISEKGTKYRQNIITIIQQQNLDIHTTSRLKFSIT AHVPDKRRRDLDNLQKAVFDSLVHAGFMEDDEQIDDFRVRRGELVKGGKLEVVITELEEA >gi|316918893|gb|ADCU01000013.1| GENE 248 275984 - 276295 244 103 aa, chain - ## HITS:1 COG:no KEGG:Ent638_0788 NR:ns ## KEGG: Ent638_0788 # Name: not_defined # Def: NinB family protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 102 48 149 150 143 68.0 2e-33 MWPLLHDLAQQVVWYGQKYDEDDWKDLITALVAKTKKEEQRTAPGIGGGVVMFGQRTSKM RVSEMIDVIEAIYWFGSEQGVKFSEESSAVMRWAQQHNRSSAA >gi|316918893|gb|ADCU01000013.1| GENE 249 276436 - 276633 170 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|261245575|emb|CBG23370.1| ## NR: gi|261245575|emb|CBG23370.1| predicted prophage protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] # 1 64 21 84 90 74 54.0 2e-12 MWKSGEWMMGIALKKWAKRRKISRKQRAVEELYDAFELDTIKDGDQMKITTAKGLVIMMY RQEKP >gi|316918893|gb|ADCU01000013.1| GENE 250 276693 - 277046 147 117 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIYRRGWVPVLHRIDLEAMLKENGFENWKEISRLLCEGDSKAWIDYDLSQGQYAYQVVDN TKWMARCDAKFWQRLNRLWFVPIYVLTIPFQWLIRGKVGFEATSKFGMLCRNLTGLE >gi|316918893|gb|ADCU01000013.1| GENE 251 277048 - 277317 245 89 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTSREQFEAECLNGLINGGLAKHENGKYASELTDAVWRGWQASRDAVEMELPKRREYVDT LSDHELGFNIALENCAEAIRAAGIKVKGE >gi|316918893|gb|ADCU01000013.1| GENE 252 277304 - 277546 111 80 aa, chain - ## HITS:1 COG:no KEGG:Ctu_11340 NR:ns ## KEGG: Ctu_11340 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 7 74 3 70 70 76 57.0 3e-13 MTSREGWIKCSERMPDDGFYVLVSDGHWTWVETHFVEECHINNCKMWLSANPEADPRPLN TFTHWQPLPEPPQESNDDKS >gi|316918893|gb|ADCU01000013.1| GENE 253 277549 - 278886 764 445 aa, chain - ## HITS:1 COG:STM4246 KEGG:ns NR:ns ## COG: STM4246 COG0305 # Protein_GI_number: 16767496 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Salmonella typhimurium LT2 # 3 439 30 471 471 193 32.0 7e-49 MDSYDFEEQLIGSMIIKGDHVDCLEIAGKLPAEAFANFHLQNMYRVIVALLNKCEPIDPF TVQEGVSGETRDLVLSVSARCKSAANIKAWAKRVRQCWMLRKGEAELTKAASLLREAGTH DLNERIAEVSGILSNLQFETNDRLPRKIGDLLPDYMDVLEKRMKGAESGLYLKTGIEPMD NEYGGFDRTDLIIIAGRPGMGKTELAINIGNSIGHQKGRGLMISMEMSEMQVVERHVADR SGLAIGALRNPLDMIPEQFTRLTAAAGMLQGEDNYVLDETMSVDEIISHAERLNMDGGLS FVSIDYLGLMKKPKAERNDIAIGEITRKLKQFSLRSKVPVILLSQLNRGVETRPDKRPTL ADLKDSGAIEQDADVIIFPYRDEVYHDNSNMKGIAEIIVGKYRSGQPKTFYMGWKNGHFV NIEQDEAARRYAANQNDNKQASEWR >gi|316918893|gb|ADCU01000013.1| GENE 254 278886 - 279884 348 332 aa, chain - ## HITS:1 COG:no KEGG:Ctu_11440 NR:ns ## KEGG: Ctu_11440 # Name: not_defined # Def: DNA replication protein GP18 # Organism: C.turicensis # Pathway: not_defined # 180 328 138 294 298 203 63.0 9e-51 MENQKMGHFALFRSLLSADWALDVGKLALWVRLIGQATHKPRTVSFNGVEWSLAAGQLVT KYDLLCRKLRDAEGKEKSPQQVRRMLDFFVSQGMLSYSGNRHGTVISITNYSDYQLIADQ ENGNNHKNDAEGNKPSAGAGLSGIAGGNDAGGKYGGNSEDNKPSAGAALSHSPEGNSEGK CGVHEQEVIKQELKHTQTHDVGLLDVSKKTPRQAGTNPRALGTNPRASMPPFDRDRLKET WNTKAEKYGLPKIISVSETVEKGLKRLWKSYLKQCKDLGAKPTEINTFLNGYLAHGYTPT KWSCGENPDGKKYGIETALRQEKIDEILTRED >gi|316918893|gb|ADCU01000013.1| GENE 255 279934 - 280083 89 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQKDWRYVQQSTHKSIIRDQFLRSVNLGFIQKLKALLPEKKASEGKNDG >gi|316918893|gb|ADCU01000013.1| GENE 256 280105 - 280446 147 113 aa, chain - ## HITS:1 COG:no KEGG:ESA_01613 NR:ns ## KEGG: ESA_01613 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 5 84 7 86 114 81 56.0 9e-15 MEHAKTRNNSQEIEVRIRGLISRLGLASVAKGMGLDKSQISRMQTGKQCFVERVAKFLEV IGFCKEESLLSIAGDEAAEIAKSLRMLSMIINSEKKKSPTAVTADDSQITMNF >gi|316918893|gb|ADCU01000013.1| GENE 257 280551 - 280787 128 78 aa, chain - ## HITS:1 COG:no KEGG:Ent638_1012 NR:ns ## KEGG: Ent638_1012 # Name: not_defined # Def: regulator protein, putative # Organism: Enterobacter_638 # Pathway: not_defined # 1 73 1 73 75 100 69.0 1e-20 MNPVQIAVNAVGGQTAAAKLCGLSVVAVHKWAVKGTLPRTEYTGKTNYSKLLANASNGKF TSEWLLNAANPDKTSLAA >gi|316918893|gb|ADCU01000013.1| GENE 258 280871 - 281638 243 255 aa, chain + ## HITS:1 COG:PA0906 KEGG:ns NR:ns ## COG: PA0906 COG2932 # Protein_GI_number: 15596103 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Pseudomonas aeruginosa # 29 254 3 237 237 141 38.0 1e-33 MVKKDDVKEAFSRRLDAACLDAGVAGRGLPGRIKAALKKQGIEISEPAIWKWRNGAAIPD STNILALSRWLNVRAEWLEYGVEPMSQDAAIAQKEPDMPPQNQWSGVDVWDSNTPLGDDE VEIPYFKSIELAAGHGCVNNEDHNGFKLRFSKATLRRAGADPACTIAFPVHGHSMEPVIP EGTTVTVDLANKRIIDGAIYAIDHGDLLRVKQLFRLPNKKLSIRSYNKIDFPDEEADQDS VEIIGRVIHYSVMLV >gi|316918893|gb|ADCU01000013.1| GENE 259 281920 - 282261 277 113 aa, chain + ## HITS:1 COG:no KEGG:Ent638_1010 NR:ns ## KEGG: Ent638_1010 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 111 1 111 115 110 56.0 1e-23 MTHDFTGAVLKHDAEASIQEKQLFSIKKAVTGLIEFVTTSLDQMGIDKLHELVDPSLDEL DAIIIGLSEEAKKHNDLNLQQVLLIAQMLINDIKLKNPEMCESSSRMLKKANF >gi|316918893|gb|ADCU01000013.1| GENE 260 282291 - 282413 95 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKLESITTMLRLAKRLDEIVADMKCRKEFMLESMNRKAA >gi|316918893|gb|ADCU01000013.1| GENE 261 282464 - 282655 157 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDKNAIGYNDLCEAVGKATLNLVSYKQEVTKEYIISMLESFAQIEYDEKRRATYIMAAEA MKE >gi|316918893|gb|ADCU01000013.1| GENE 262 283685 - 284095 114 136 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDFGLVITSIQSAIDSVSAVQSNAVLRERLAFICEQMDVLQKAHTATEKELAEANIKIAE LSKEVAANRAKDEFVFHRTAAFRKEPSGGYVRSVYCPNCFKQVGSDFGDMPYHCSSCGWL AEFGGRELSRVMESLP >gi|316918893|gb|ADCU01000013.1| GENE 263 284276 - 284428 163 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no METFEANGKTWATDEDTLRLLEAFRAEKNDEMVGATFELGKAFGRIVEAK >gi|316918893|gb|ADCU01000013.1| GENE 264 284659 - 284859 107 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDGRARFDTESAAVFEACGNKEPSNKSLRKGWGDMDAVLVRAPVTAKDSTTGDVISCGDF EYVRDI >gi|316918893|gb|ADCU01000013.1| GENE 265 285232 - 285366 145 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIYAIAGCPNMGNLKQSHLRNLIERAKDAARRLIDLLNQPGNPL >gi|316918893|gb|ADCU01000013.1| GENE 266 285476 - 285754 249 92 aa, chain + ## HITS:1 COG:no KEGG:ECO103_2862 NR:ns ## KEGG: ECO103_2862 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 88 1 88 93 67 39.0 1e-10 MNAYQLQDYIEDQRIKQSDAELERQNWIDNRAEEILSEYPDGPESFAGFNLPESVRMGLY TSKAKDAYNEFITVMAWERAETEWNDKYGWAA >gi|316918893|gb|ADCU01000013.1| GENE 267 285742 - 286572 71 276 aa, chain + ## HITS:1 COG:no KEGG:ECB_01327 NR:ns ## KEGG: ECB_01327 # Name: recE # Def: exonuclease VIII, 5' -> 3' specific dsDNA exonuclease # Organism: E.coli_B_REL606 # Pathway: not_defined # 5 276 595 866 866 397 66.0 1e-109 MGGMMETGIYYDISNEDYHAGEGISKSQLDDIAVNPAFYLWRKNAPVDEEKIKSLDMGSA LHCLLLEPDEFDKRFIVAPEFNRRSNAGKEEEKEFLKQCEGLNMTIMTAEEGRKLKIMRE SALAHPTARWMLEAQGVQEASIYWEDDETGVLCRCRPDKMITEFNWCLDVKSTADMDRFG RSYYDYRYHVQDPFYSDGYHKQFGEHPTFVFLAISTSINCGRYPVKIFTSDAQARQAGRE EYKRNLRTYSECLSTNEWPGIETLSLPYWAKELRNE >gi|316918893|gb|ADCU01000013.1| GENE 268 286565 - 287401 383 278 aa, chain + ## HITS:1 COG:ECs1933 KEGG:ns NR:ns ## COG: ECs1933 COG3723 # Protein_GI_number: 15831187 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecE pathway) # Organism: Escherichia coli O157:H7 # 1 277 1 269 269 376 70.0 1e-104 MSSQPPIATADLQKTQQSKPPAEKSPEQTLVAFMNQPAMKNQLAAALPRHMTADRMIRII TTEIRKNPELAGCNQQSFIGSVVQCSQLGLEPGNSLGHAYLLPFNKNKKNPSTGKWEVVS KDVQLIIGYRGMIDLARRSGQIVSISARTVREGDEFKFEYGLNETLTHIPGENEDAKITH VYAVAKLKDGGVQFEVMTFKQVEKVRSQSKAGNSGPWSTHWEEMAKKTVIRRLFKYLPVS IEMQKAVIMDEKAEAGVDQENASVIHGEYSVVDGSSEE >gi|316918893|gb|ADCU01000013.1| GENE 269 287405 - 287587 73 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWHPHNDIRVGKVTIPYSGKNNGWVLPDNTFTSNPIKAQRLAEKHNAFLTKLARELHWAA >gi|316918893|gb|ADCU01000013.1| GENE 270 287597 - 288364 326 255 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNNLPIQTYESVVQQRDELEKKLLAYEQAAKNPIGSFHISGGQVEATTDYCRDGEWPVQD GEVLVYAVPVLPKQPELIGMKVSIDTGSDNIGHRLFGEIVGTSESNGVPVLCIEVTENNV DVAAPAQPVIPERPELRYGDNVLWFLNELAAFDASDIDSDDFDVYGEDRNGIEGCATISI TELAADAAKLLSAQPVSNPYKLPDNLDFDCEFENGDYDIDEEPWLRGRVDGFNEALQIIK RSLNAKQNPTAQESE >gi|316918893|gb|ADCU01000013.1| GENE 271 288364 - 288855 331 163 aa, chain + ## HITS:1 COG:no KEGG:ETAE_2481 NR:ns ## KEGG: ETAE_2481 # Name: not_defined # Def: putative methyltransferase # Organism: E.tarda # Pathway: not_defined # 3 155 4 156 157 239 72.0 3e-62 MTKTILDMCCGSRMFWFDKQNPDVMFCDIRSESHTLCDGRNLEIKPDMIADFRHLPFADE SFNVVVFDPPHLVRAGENGWQRKKYGVLNKETWRDDLEEGFHEAFRVLRGHGTLIFKWNE TQIPVSQVLALTKHKPAFGHPVGKRANTHWMCFVKAPTAQEQK >gi|316918893|gb|ADCU01000013.1| GENE 272 289117 - 289308 158 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEAALKHHQAKYGDYAPSKESENYTVLVDGMKIVVEIMNRKKSYVATSMMRPRDLSKVWG NAA >gi|316918893|gb|ADCU01000013.1| GENE 273 289305 - 289847 133 180 aa, chain + ## HITS:1 COG:no KEGG:PAU_03141 NR:ns ## KEGG: PAU_03141 # Name: not_defined # Def: DNA N-6-adenine-methyltransferase (putative dna methylase) # Organism: P.asymbiotica # Pathway: not_defined # 5 180 6 180 180 265 69.0 8e-70 MSEFASNTPLEHKDRWQTPIEVFAALDAEFGFYLDAAADHGNALCARYLTESDDALNSEW VSYGAIWCNPPYSAITPWVGKATEQCRAQSQPVVMLLPADTSTGWFSLALESVDEVRIIT GGRLAFINAGTGKPGKNGNSKGSLLFIWRPFIKPRCQFTTVSRDELIAIGSDIMAGVKAA >gi|316918893|gb|ADCU01000013.1| GENE 274 290771 - 291313 246 180 aa, chain + ## HITS:1 COG:intD KEGG:ns NR:ns ## COG: intD COG0582 # Protein_GI_number: 16128520 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 11 176 202 376 387 130 40.0 1e-30 MLIGALRLDWMKDVVSFALLTGARKGEIFSLKWENVNLSRRIAVVTAENAKSGKARPIPL NDEAVKIISGRSRESEYVFSVDGGVIKEISRADFANALKVSGIFDFRFHDLRHTWASWHV QNGTPLMTLKELGGWEKLEMVNKYAHLSTEHLSRFSGIVTFLAQDEIEKENRPALSLVNY >gi|316918893|gb|ADCU01000013.1| GENE 275 291501 - 292574 1065 357 aa, chain - ## HITS:1 COG:YPO3192 KEGG:ns NR:ns ## COG: YPO3192 COG0809 # Protein_GI_number: 16123354 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Yersinia pestis # 1 355 1 355 356 601 83.0 1e-172 MRVSDFSFELPDNLIARYPQAERSACRLLSLDGPTGKLEHGVFTDVLNKIDAGDLLIFNN TRVIPARLFGRKASGGKLEVLVERLLDDTRVLAHVRASKSPKPGAELLLGDNEDIRVTMV ARHDTLFELRFEDGRDVLTILNAAGHMPLPPYIDRPDEDADRELYQTVYSSRPGAVAAPT AGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIENHTMHSEYAEVPQDVVDAV LACKARGNRVIAVGTTSVRSIESAAAAAKDQLIAPFFDDTQIFIYPGYHYQVIDALITNF HLPESTLIMLVSAFAGYKNTMHAYHEAVAKEYRFFSYGDAMFITHSELAEQEKVSAE >gi|316918893|gb|ADCU01000013.1| GENE 276 292763 - 293344 325 193 aa, chain + ## HITS:1 COG:YPO3193 KEGG:ns NR:ns ## COG: YPO3193 COG3124 # Protein_GI_number: 16123355 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 193 1 193 193 239 67.0 2e-63 MNFLAHLHLASLAHSSLYGNLLADFVRGNPQGIYSAPIIDGIFMHRRVDVMTDRLPQVLE AKRCFRQEFRRVAPITLDVVWDHFLALHWKELEPEISLNAFVNHARSEIVPMLPQSPERF QNLNAFMWQERWLERYAELPFIAKVLQGMANRRPKLGALAGSFVDIEDNYLQLEQTFWQF YPQMIAQAKAKTL >gi|316918893|gb|ADCU01000013.1| GENE 277 293567 - 294169 664 200 aa, chain + ## HITS:1 COG:YPO3194 KEGG:ns NR:ns ## COG: YPO3194 COG0450 # Protein_GI_number: 16123356 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Yersinia pestis # 1 200 1 200 200 367 85.0 1e-102 MVLVTRQAPDFTAAAVLGNGEIVENFNFKEFTKGKPAVVFFWPMDFTFVCPSELIAFDHR YKEFKSRGVEVVGVSMDSEFVHNAWRKTPVDNGGIGEVQYPLVADIKHEIMQAYGIEHPE AGVALRGSFLIDKEGVVRHQVVNDLPLGRNIDEMLRMVDALQFHEEHGDVCPAQWEKGQE GMGASPDGVAKYLSENAAKL >gi|316918893|gb|ADCU01000013.1| GENE 278 294250 - 296076 1184 608 aa, chain - ## HITS:1 COG:YPO3200 KEGG:ns NR:ns ## COG: YPO3200 COG0366 # Protein_GI_number: 16123361 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Yersinia pestis # 1 603 1 603 609 835 63.0 0 MLFAWHLPVPPYVHHHDDRLEIGLWLQGDDLPHQVMLRCEPDNEEWLLVMQTQKQGDYTR YQADLTLLAGESVRRYCFKLLWENRQQWFGPQGFSIIPPAQMAQFALEIPTLSPAWVADQ VFYQIFPDRFSSSGLEHTVKDGSYFHYAVQRDVIRKAWDEPLTDENASSTFYGGDLDGIV ERLPYLKALGITALYLNPIFTAPSNHKYDTEDYYQVDPYLGGNAALIRLREKTHELGIRL ILDGVFNHTGDTHPWFDRYQQQTEGAYYDPASPHRTRFTFTADGRVLDWKGNTTLPKLDF SSQSVVDSVYQADDSVLRHWLREPYHIDGWRLDVVHMLGEGGSARGNLHHLEGMYRAVKS ENPQAYVFGEHFGDARRWLQAGVEDAAMNYMGFALPVRAFLTNVDVAYQPIQLSAAQCAE WMDSYRAGLSHTQQLAMFNQLDSHDTARFITLLADNPQRMPMALVWLFTWIGVPCLYYGD EIGLDGENDPFCRKTFPWDESRWNSDLLALTQRMATLRHRSTALRRGGCHIVHARDEMLV FIRQYENETVLIALQRNGRGRCILPNSPFIPAGRWRCIEGYGKLVRENGYIELMMSAESA GVWRWFRE >gi|316918893|gb|ADCU01000013.1| GENE 279 296482 - 297732 1150 416 aa, chain + ## HITS:1 COG:STM0569 KEGG:ns NR:ns ## COG: STM0569 COG0668 # Protein_GI_number: 16763946 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Salmonella typhimurium LT2 # 1 413 1 412 415 555 67.0 1e-158 MHNTLRRWLEQYGIEFTHVTSLIIVIGLIMVTAVIIHLLLHRVLLSRLEKRGQHSKILWL KVITQHKLFHRLAFTLQGVIVNIQAVFWLHPGTDAGDALIICAQMWVMLYALLALFSLLD TLLDLASNMSVADQLPLRGIFQSIKLVAAIIIGILMISLLIGQSPLLLISGLGAMAAVLM LVFKDPILGLVAGIQLSANNMLKLGDWLEMAKYGANGTVVDVGLTTVKVRNFDNTITMIP TYALVSDSFINWRGMSESGGRRIKRSLNIDTTSVHFMSEEEHQRLMKSALLAPYIDAKTQ ELKTYNSELQADLSSPLNGRRMTNLGTFRAYLVAYLNAHPQIRKDMTLMVRQLAPTADGL PLEIYAFTNTTVWAQYESIQADIFDHTFAIVSEFGLRVHQTPTGNDMRAIGHTQAD >gi|316918893|gb|ADCU01000013.1| GENE 280 297934 - 298176 248 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPFLSALILITSLHSADVDISKIASQNAQNYSQLTSDLHDVREALILSVRESRREERDED RHEIIAPAEHSEAEDISRLS >gi|316918893|gb|ADCU01000013.1| GENE 281 298239 - 299633 1371 464 aa, chain - ## HITS:1 COG:YPO3201 KEGG:ns NR:ns ## COG: YPO3201 COG1113 # Protein_GI_number: 16123362 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 6 459 7 455 463 685 86.0 0 MQQQPNQLKRGLNTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYLIGGVVAFIIM RALGEMSVNNPQASSFSRYAQDYLGPMAGYITGWTYCFEILIVAIADVTAFGIYMSVWFP AVPHWIWVLSVVLIIGAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGIGIIFWGIGNGG QPTGIHNLWTNGGFFSNGFIGMIFSLQLVMFAYGGIEIIGITAGEAKNPKVSIPKAINSV PLRILVFYVGTLFVIMSIYPWNQVGTQGSPFVLTFQHMGITVAAGILNFVVITASLSAIN SDVFGVGRMLHGMAQQGHAPKIFSKVSRRGIPWVTVLVMVLALLIAVYLNYIMPENVFLV IASLATFATVWVWIMILFSQIAFRRSLSPEQVQALEFPLRGGILTSAIGIIFLVFIIGLI GYFPDTRVSLYAGIVWVIVLLLGYGFVKKSAKVGHQDKQKHIAR >gi|316918893|gb|ADCU01000013.1| GENE 282 299778 - 301097 1003 439 aa, chain - ## HITS:1 COG:YPO3202 KEGG:ns NR:ns ## COG: YPO3202 COG1114 # Protein_GI_number: 16123363 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Yersinia pestis # 1 437 1 437 439 623 82.0 1e-178 MTHRLTSKDILALGFMTFALFVGAGNIIFPPMVGLQSGEHVWIAAIGFLITAVGLPVMTV VALAKVGGGIDALSTPIGRKAGLLLATVCYLAVGPLFATPRTATVSFELGIAPLTGDGAA PLLIYSVVYFALVIAISLYPGKLLDTVGHILAPLKIVALAILGIAAVLWPAGVHVPAIEI YQQVPFSSGFVNGYLTMDTLGAMVFGIVIVNAARSRGVNDSRLLTRYTVWAGLIAGIGLT LVYLSLFKLGSSSGELVPDAQNGAVILHAYVQHTFGGIGSLFLAALIFIACMVTAVGLTC ACAEFFAQYLPFSYRTLVFILGLFSMVVSNLGLSHLIQISIPVLTAIYPPCIVLVVLSFT VRWWNSAPRVFSPVMIVSLVFGILDALKGSALASHLPVWTEHLPLAGQGLAWLPPSLLVC VVMAIIDRTMGPRNVTVHN >gi|316918893|gb|ADCU01000013.1| GENE 283 301738 - 303942 897 734 aa, chain - ## HITS:1 COG:STM2503_3 KEGG:ns NR:ns ## COG: STM2503_3 COG2200 # Protein_GI_number: 16765823 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Salmonella typhimurium LT2 # 481 734 8 261 262 286 51.0 1e-76 MSQLQNQIHRLSYWWGLPLLFAAILLPFSLMASPYLLVGEGEVFLLFLPLAISVSLLMIF SWRVFPSLAIVSFVLYIYKLGLLPGAWVALAFTLSLGICWYSFLKHVGNRWSCGFGRMQT MLPRLFWIVVVLPLVFLLLIQIAVALGVFIPVERMAASAPFSIRTLISYQALILACLSGV PMCYYLLRVAIKPRFIRVIVSRCRKELAQGVSAWEIQLWLVLLVIMLVMLCIPANDSSNI FFTDYTVTLLLPLMLFGAMRYGYQLTSLVWSASVITLLINYDGFVQWDNLAHSLALIMSM MVMFTLTIILMAAVNTRQRRLYIKTQRASMIDPVIQLPNLRCLHHDLKQHERSVVCFLRI ANLDTLCRTYGMQLRLEYKQRLASMMKKVMANNEGVYQLPSYDLVLRLNNKSAAETLKRL NDAMKAFRLLWNGLPLRLHYGIGYCTVRQPLEHIYTIIGELSSMAERSLITGNAESTHLN AQTLQEGIHSKVAMLHHIQNGLDKDRFMLMAQPIEGFRGDRYYEVLLRLQDEHGNIIMPN DFFPVVQEFGLNYDVDLWVLNNTLAFINENRERLPAVCFAINLTPSTLARPTLVQDIARI LAQYQVEPYQIILEITESNITQTKELTSKTLSQLRQMGCRIAIDDFGTGFASYDRLKHIE ADILKIDGSFVRQLMDSPIDQQIVSAMCQIARLKKLLVVAEYVEDEAQKFQLKALGVDYI QGYLLGKPQPLSSL >gi|316918893|gb|ADCU01000013.1| GENE 284 304484 - 304726 163 80 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_1027 NR:ns ## KEGG: NT01EI_1027 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 67 2 65 65 71 61.0 9e-12 MNIHKLKRRTNVQMTKIVLLISFIILIGRLLYASFGAISHHQDKKENQQIAPTEKSQPLQ LDTESAKPAQKKDAQTPLKD >gi|316918893|gb|ADCU01000013.1| GENE 285 304792 - 306228 1484 478 aa, chain + ## HITS:1 COG:YPO2839 KEGG:ns NR:ns ## COG: YPO2839 COG2239 # Protein_GI_number: 16123034 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Yersinia pestis # 5 478 18 491 491 669 74.0 0 MPVIAKNHVKQRAEDRFRILQLLLNNKSLSEGILGKLEDPEQLHNPELLDQTAEIKSLVN KLPAPDLADTLEALPADERHALWRLVGKEKRGKTLVEASESVWDSLIDEMSDKELLTALR SLDIDEQVYLGQYLPRNLMGRLLTSMEPEQRAQVREVIRYGKHTVGAIMDFEIITVRPDV SLATVQRFLRMRGAIPLNTDKLFVTDRTNRLLGELCLTTVLLNKPEKRVSEVMDKDPATF DPEDNDEEAARTFERDDLLSAPVVDAKGKLMGRLTIEDIVDVVYEESDTDLRRMGGLSAE EDVFAPVTKAVKTRWAWLALNLCTAFIASRVIGLFEHTISQLVALAALMPIVAGIGGNTG NQTITMIVRALALQHIQAGNISFLLLRELGVALINGIVWGGLMGLVTYLLYHNAAMGGVM TLAMILNLLMAALMGVVIPMTMTRFGRDPAVGSSVLITAITDTGGFFIFLGLATLFLL >gi|316918893|gb|ADCU01000013.1| GENE 286 306671 - 309430 1538 919 aa, chain + ## HITS:1 COG:STM2123_2 KEGG:ns NR:ns ## COG: STM2123_2 COG2202 # Protein_GI_number: 16765453 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Salmonella typhimurium LT2 # 228 479 1 258 258 243 46.0 1e-63 MAANWTFFPISLFSVQLALINQIQAVVCTLLLSKFLNHKSPIDGLHTWFKFVICSVIVSP LLSATLAAIVVSLHGLATFNQVFGVWFMSESISVMALTPVGLLYYYGFLQKSLREQTMVE CITIITIALISCFYAMQYLPFPFTFAVIPMLWAAIRLPLLQAFTSFLCVIILLAIMIAYH IVDIRAAYPSVNDVLLYTPLLLVLLPVNSVAVLMHAFRSERDHIEESETRFRNVIEFSAI GTALVGLDGRWIQVNPALCQMLGYPADVLTDMTFQDITHRDDLETDLRQLNALVDGEINS YSMEKRYLRSSGESIWTLLSVSLIRDPQGKPLYFVSQIKDISEIKNNERYKQQLLDKLYE EKERLHITLTSIGDAVISTDSYKHVTFMNPVAEKMTGWTQLEALGLPIDNIVHLYDGVDG DTVHPLRIDEVSHAKRTEDRLILKNRQGAHFDVQSRVSELTDIHRNLMGYVLVFQDVSES RELLRKLSYSALHDPLTGLPNRVSFEQALKRALRQAVEEKRTHALVFLDLDRFKAVNDSA GHAAGDALLQKISQSMLSHTRPPDMLARLGGDEFAFILLDCEIHKAKEHITRIINEINDY LFEWEGKLHRVGASAGMTVINSGNAIAADLMNQADIACYTAKHSGRGKLMCYEPKHKLHI NYEKGLLSGEDIDAILAEDRIHILAQGIAPPKTPRAIAFYNLELMPYQNNGVNILPELFL ESCFQSHRREHVDRWLLHKVLNHTSQALKYKGVSVALPLASSSLCNAQFTAQLIEMLQQS ALPTSRLLIRVPESAVNEDYAQSLPALKALSELGCRLIVEDFGRNLSAIERLESVNIEYV MITPTLITNVHCNQMDEVLVSIIHGNAWRHGAQTIAGPADIQATLLTLDSIKIDLAFGNM IQEVKPLTAVLEDGYFGMN >gi|316918893|gb|ADCU01000013.1| GENE 287 309441 - 309923 412 160 aa, chain - ## HITS:1 COG:VCA1017 KEGG:ns NR:ns ## COG: VCA1017 COG0350 # Protein_GI_number: 15601770 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Vibrio cholerae # 2 154 3 154 157 140 45.0 1e-33 MNYGHFATPQGEMFVLFDEESVHGIYFDGQKYLPDFSLHQALNNHPLLDAVKPQLLAYFS GQSDCFDFPLAVRGTPFQQAVWQALREIPCGETCSYMDVAIKVGNPRGVRAVAQAIGHNP WSVVIPCHRVIGTSGKLTGYAGGINRKAWLLEREGVNIPA >gi|316918893|gb|ADCU01000013.1| GENE 288 309923 - 311356 842 477 aa, chain - ## HITS:1 COG:alkA KEGG:ns NR:ns ## COG: alkA COG0122 # Protein_GI_number: 16130008 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase # Organism: Escherichia coli K12 # 196 472 3 277 282 265 48.0 1e-70 MNGNHEIWYAALKARDPKFDGRIFVGVSSTKIYCRTVCGARTPKAENCHFYPSAAAAERD GYRPCLKCRPELAPGLSIVDLSSRYMQLAVQLIEQGFLTQHSCEELATRLGISDRQLRRV FADRFGASPIEYAQSYRLLQAKRLLMDSHLPLADVALSAGFGSLRRFNELFSARYRMTPS SLRANNKGQEDGLTLSLSYRPPYDWEWMLGFLAARSVSGVDSVTSNGDYQRTLRIGDAAG WIVLHPEASRCRVKVLISDSLAPHAPEVLRRVRQLLDLDADPVAISAGLGSLAQNTGLRL PGCVNAFEQSVRAILGQVVSVKMAAKFASAVAERWGEAVDTPWDELKVIFPDAHQLARVT PEALKTIGIPLKRAASIVHLAKEVSEGRLSLEDVLDIEGGIAAITAIPGIGSWTATYIAM RAWSWPDAFLQGDYLIKQRFPQMTPSKIVHYAERWRPWRAYATLHLWHNDSWTTETI >gi|316918893|gb|ADCU01000013.1| GENE 289 311531 - 312904 1032 457 aa, chain + ## HITS:1 COG:YPO2840 KEGG:ns NR:ns ## COG: YPO2840 COG0443 # Protein_GI_number: 16123035 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Yersinia pestis # 8 457 1 450 450 738 79.0 0 MGNVGEHMFIGFDYGTANCSVAVMRGDQPELLPLEQDSPYLPSMLCAPTREAVSECLHRH WQVPTGSDENQQLLRRAINFNREEDIPVNSDSIQFGLKALGIYVEDPEEVYFVKSPKSFL GANGLKPQQIAMFEDLVCAMMYHIKRQAESSLNHPITQAVIGRPINFQGTGGEEANAQAQ GILDRAAHRAGFQDVTFQFEPVAAGLDFEATLNAEKKVLVVDIGGGTTDCSVLLMGPQWR ELSDRHDSLLGHSGCRVGGNDLDIMLAFKQMMPLLGAGGVTEKGTALPALPYWNAVATND VPAQSDFYSTANGRMLRDLIRDAAEPNKVELLLKVYQQRLSYRLVRAAEESKIALSQQDS ISTTLDFIAKGLVQHLNAHELAEAIIQPLERIQEQVNSALTVSNITPEVIYLTGGSARSP IIRDALARQLPGIPIVGGNDFGSVTAGLARWAQRVYR >gi|316918893|gb|ADCU01000013.1| GENE 290 312991 - 313530 461 179 aa, chain - ## HITS:1 COG:mlr0821 KEGG:ns NR:ns ## COG: mlr0821 COG4420 # Protein_GI_number: 13470973 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mesorhizobium loti # 41 172 24 161 161 113 47.0 2e-25 MNINDNSLLQKLRESRRLRRERFLNQKKASSAASPTAPTLTFGQRMADGVTSTIGSWRFI IIQSVLLACWMAGNAWFGHNAWDPYPFILLNLLLSFQAAYTAPAIMMSQTRQSDMDRKRA ENDFEINVKAELEIELLHEKIDLLKEKEIQALTEAIRTLTARLDAAAAQSNSTSPADKT >gi|316918893|gb|ADCU01000013.1| GENE 291 314041 - 314271 108 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGQSFAFAPGFTGMRCSSSDYGAGASFSARTSFTPSLSEYYSIISSIFTRSFPVISPLCA TSNQKVESMGGLRHGD >gi|316918893|gb|ADCU01000013.1| GENE 292 314261 - 315622 1388 453 aa, chain + ## HITS:1 COG:YPO1557 KEGG:ns NR:ns ## COG: YPO1557 COG0531 # Protein_GI_number: 16121828 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Yersinia pestis # 5 453 14 462 463 711 85.0 0 MAINTAPQKRVELRKTLTLVQVVMMGLAYLQPMTIFDTFGIVSGLTDGHVATSYAIALIA VLFTAVSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYL EAIFPGVPSWIFVGGLVTLMTLFNLRGINLVANLNSIIVVIQVAIMVIFLGLVIHGIYGG EGAGTLISSRPFISENAHVIPMITGATILCFSFLGFDGISSLSEETPDAGRVIPKAIFLT ALIGGVIFIVVSYFLQLYFPDISRFTNPDASQPEIMLFVAGKFFQSIILVFSCVTVLASG MAAHAGVSRLMYVMGRDGVFPERLFGYIHPKWRTPAFNVLLVGAIALSAVSFDLVTATAL INFGALVAFTFVNLSVISQFYIREKRNRTLKDTINYLILPVLGAATVGVLWVNLEESSMT LGLIWGAIGLGYLTFLTRRFRQPPPQYDAEIAQ >gi|316918893|gb|ADCU01000013.1| GENE 293 315687 - 316166 443 159 aa, chain - ## HITS:1 COG:STM3653 KEGG:ns NR:ns ## COG: STM3653 COG0454 # Protein_GI_number: 16766939 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 4 156 1 153 155 102 36.0 2e-22 MRQIRFRPFVEADILPLRHVYESAVSELTAREYTQEQRTAWIQASQAPECWRATLERIQP TVVIIDDVVSAYFDLQPDGLIDQFYVAAPFAHQGIARLMMAKILHRARQQHLPEVYAYVS LTAQPFFVRNGFEVVFTQKVELGGQVLENARMRKVLLPE >gi|316918893|gb|ADCU01000013.1| GENE 294 316171 - 316599 489 142 aa, chain - ## HITS:1 COG:RSp1153 KEGG:ns NR:ns ## COG: RSp1153 COG2005 # Protein_GI_number: 17549374 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Ralstonia solanacearum # 1 139 123 267 269 86 42.0 2e-17 MSVSARNQLSGVISAVADGAVNDEVELTLNGGAKIVAVVTHTSKQAMGLAKGKEAVALIK APWVILASADCGLVFSARNQFAGEVSALLKGAVNSTVHIKTDQGITLMSVITNESAEEMA LSNGSRVIALIKASSVMLATKA >gi|316918893|gb|ADCU01000013.1| GENE 295 316701 - 317027 114 108 aa, chain - ## HITS:1 COG:no KEGG:ETAE_0941 NR:ns ## KEGG: ETAE_0941 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 6 97 3 94 95 130 75.0 1e-29 MEDDVKNHFGEGVMDGVRAYEPKTASEMNQRCFDYRRGFVCGFAHSFGKRVDNRYMAACR AGELARDYGLERDAIADFFHGSEERGLQDYYYSGYERSRRADEVSIDA >gi|316918893|gb|ADCU01000013.1| GENE 296 317317 - 317520 307 67 aa, chain + ## HITS:1 COG:no KEGG:ETAE_0940 NR:ns ## KEGG: ETAE_0940 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 67 1 67 67 100 82.0 1e-20 MADEFDNASALEELERDLALANRQKTQMPFTGMCYNCHEKIESGNFCDKDCCEDWQKAQW AKSQRQR >gi|316918893|gb|ADCU01000013.1| GENE 297 317635 - 318060 271 141 aa, chain + ## HITS:1 COG:PM1553 KEGG:ns NR:ns ## COG: PM1553 COG0454 # Protein_GI_number: 15603418 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Pasteurella multocida # 8 134 2 128 130 155 59.0 1e-38 MSPMPEKISYHVNKPITVEQFVQLLSETTLGPRRPLNNHECLAGMLEHADILVTAWAGER LIGVARSVTDFHYCCYLSDLAVSESVQKGGVGQELIKMTCRQLKPDCKIILLAAPLAQEY YPRIGFDKHPSAWTCTAQQFC >gi|316918893|gb|ADCU01000013.1| GENE 298 318363 - 318494 78 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTTTVKSYISDNKSTIDTLVLRFCWGVAALGIVACILLTKMYW >gi|316918893|gb|ADCU01000013.1| GENE 299 318574 - 319248 557 224 aa, chain - ## HITS:1 COG:YPO2295 KEGG:ns NR:ns ## COG: YPO2295 COG1011 # Protein_GI_number: 16122519 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Yersinia pestis # 1 224 1 224 224 349 72.0 2e-96 MKYSWVLFDADETLFRFDAFEGLKLMFSRFNVDFTDSDYAEYQSVNQPLWVDYQDGRINA EQLQTTRFELWSQRLGVTANHINEAFLQAMADICDVLPGARELINALSGKANLGIITNGF TQLQTIRLERTGMKDAFSTLVISEQVGIAKPDVGIFEYAFSLMNNPPKERILMVGDNPHS DILGGINAGIDTCWVNSAGSDLPEGISPSYQVSSLSELQKILLA >gi|316918893|gb|ADCU01000013.1| GENE 300 319414 - 320376 695 320 aa, chain - ## HITS:1 COG:YPO3632 KEGG:ns NR:ns ## COG: YPO3632 COG1560 # Protein_GI_number: 16123774 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Yersinia pestis # 14 319 1 306 306 462 71.0 1e-130 MRYAMGMCKERRSIVKHSAFSKSLLHPRHWFLWFGLGILYLLVQLPYPIIRRLGGAMGRI SKRFLKRRVTIARRNLELCFPDLSPEELDARVTDNFTSLGMGLLETGMAWFWSDDRIKKW FDVSGIENLNAALEEKRGVMVIGVHFMSLELGGRVMGLCRPMMAMYRKHNNKVMEYVQTR GRSRSNKAMIDRRNLRGMVHALKAGEAVWFAPDQDFGPKGSSFAPFFAVKKAATTNGTFT IAKLAKPVLLTTVLIRKPDGSGYHLIIQPGLKDYPYDNEQAAAEFINAVIEKEILRAPEQ YLWLHRRFKTRPIGDISLYA >gi|316918893|gb|ADCU01000013.1| GENE 301 320666 - 320878 283 70 aa, chain - ## HITS:1 COG:YPO3644 KEGG:ns NR:ns ## COG: YPO3644 COG1278 # Protein_GI_number: 16123786 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Yersinia pestis # 1 70 1 70 70 112 82.0 1e-25 MSDKMTGLVKWFDAGKGFGFITPDNGSKDIFVHFSAIQSTAFKTLDEGQRVEFTVENGQK GPSAANVVAL >gi|316918893|gb|ADCU01000013.1| GENE 302 320790 - 320978 87 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLLPLSGVMKPKPLPASNHFTKPVILSDMIFPNLFKVESPLSGEKGLFYQRTYGSTKEG NS >gi|316918893|gb|ADCU01000013.1| GENE 303 321327 - 321965 215 212 aa, chain - ## HITS:1 COG:no KEGG:CKO_01822 NR:ns ## KEGG: CKO_01822 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 198 4 202 218 185 50.0 7e-46 MKINKALSPATAMLAIIVATFPLLAILKLPLAHGAVVQVIEDAQSVWLLFGAIFTWCYMK PLTLPPRQKVFWCWATVWWIVLFGRGISWGRDFFPEVHKIYFRTISVILIGTLLLMLFIP ALRKDIATRFKYQSIPLWTVLLMVVSFLISDTIEHHRLLSPLFIRDRQYQDLLEELYELP FMLCLFSVAYDIMRSDKKLHRKERLALIESYH >gi|316918893|gb|ADCU01000013.1| GENE 304 322221 - 322661 269 146 aa, chain - ## HITS:1 COG:YPO1760 KEGG:ns NR:ns ## COG: YPO1760 COG1846 # Protein_GI_number: 16122016 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 137 1 137 155 194 74.0 5e-50 MHESLTIALLQARETAMGFFRPILKSHNLTEQQWRIIRVLADGQSIDFHELSCKTCISRP SLTGILTRMERDRLILRLKPISDQRKLYISLTPDGKLLYEKARLQVEEGYQAIEQAFSSE KMTQLTLLLDELIALGNLSSATENDE >gi|316918893|gb|ADCU01000013.1| GENE 305 323033 - 323677 559 214 aa, chain + ## HITS:1 COG:STM1101 KEGG:ns NR:ns ## COG: STM1101 COG0179 # Protein_GI_number: 16764459 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Salmonella typhimurium LT2 # 1 203 1 203 429 309 72.0 3e-84 MKGTVFAVALNHRSQTEAWHDAFLQPPYKTPPQTPVWFIKPRNTVIRSGDAIPFPQGEEV CSGATIALVIGKTARKVSASDAANYIAGYALANDVSLPETSFYRPAIKAKCRDGFCPLGE LAPLANVDSVEIVTEINGQEANRWSTADLNRSAAELLCALSDFATLQPGDVILLGTPQQR VSIKPGDNIIIKAAGLPTLENSVRLQPKRTGETA >gi|316918893|gb|ADCU01000013.1| GENE 306 323674 - 324438 807 254 aa, chain + ## HITS:1 COG:PA4122 KEGG:ns NR:ns ## COG: PA4122 COG0179 # Protein_GI_number: 15599317 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Pseudomonas aeruginosa # 1 249 1 249 259 350 71.0 2e-96 MKHARIRYQGKKFDVTVDEQLRVCLPDGTTLTAEQVEWLPPAEGTLFALGLNYADHAAEL EFKAPEEPLIFIKAPNSLTGHQQISVRPDNVEYMHYESELVVVIGKTAHQVTPDEAMDYV AGYTVCNDYAIRDYLENYYRPNLRVKSRDTLTPIGPWIIDKSEIPDPHRLALSTYVNGEL RQRGTTADLIFDIPFLIAYLSEFMTLQPGDMIATGTPKGLSDVVPGDEVIVEVEGVARLV NRIISQTDYEESLR >gi|316918893|gb|ADCU01000013.1| GENE 307 324435 - 325901 1312 488 aa, chain + ## HITS:1 COG:STM1102 KEGG:ns NR:ns ## COG: STM1102 COG1012 # Protein_GI_number: 16764460 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 488 1 488 488 967 95.0 0 MKKVNHWIDGKNVTSKQYFETTNPATGEVLAEVASGGEDEIYQAVAAAKEAFPKWANLPM KERARLMRRLGDLIDENVPDIAAMETADTGLPIHQTKNVLIPRASHNFEFFSEVCQQMNG KTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAPCLALGNTAVLKMSELSPLTA DRLGELALEAGIPAGVLNVVQGYGATAGDALVRHHDVRAVSFTGGTATGRNIMKNAGLKK YSMELGGKSPVLIFEDADIERALDAALFTIFSINGERCTAGSRIFIQQSIYPEFVKRFAE RANRLRVGDPQDPNTQVGALISRQHWEKVSGYIRLGIEEGATLLAGGPDKPSDLPAHLKN GNFLRPTVLADVDNRMRVAQEEIFGPVACLMPFKDEAEGLRLANDVEYGLASYIWTQDVS KVLRLARSIEAGMVFVNTQNVRDLRQPFGGVKASGTGREGGEYSFEVFAEMKNVCISMGD HPIPKWGV >gi|316918893|gb|ADCU01000013.1| GENE 308 325970 - 326827 709 285 aa, chain + ## HITS:1 COG:STM1103 KEGG:ns NR:ns ## COG: STM1103 COG3384 # Protein_GI_number: 16764461 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 282 1 282 283 569 93.0 1e-162 MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEIGKRCREMGVDTIIVFDTHWLV NSAYHINCADHFSGVYTSNELPHFIRDMTYDYDGNPELGQLIAKEACAMGVRAQAHNIPS LKLEYGTLVPMRYMNSDKHFKVISISAFCTVHAFEDSRKLGQAILKAIEQYDGTVAVFAS GSLSHRFIDDQRAEQGMNSYTREFDHQMDERVVKLWREGQFKEFCEMLPEYADYCYGEGN MHDTVMLLGMLGWDKYDGKVEFITDLFASSGTGQVNAVFPLPEQA >gi|316918893|gb|ADCU01000013.1| GENE 309 326837 - 327220 429 127 aa, chain + ## HITS:1 COG:STM1104 KEGG:ns NR:ns ## COG: STM1104 COG3232 # Protein_GI_number: 16764462 # Func_class: E Amino acid transport and metabolism # Function: 5-carboxymethyl-2-hydroxymuconate isomerase # Organism: Salmonella typhimurium LT2 # 1 126 1 126 126 226 86.0 5e-60 MPHFYAECTDNIRQQADLPALFAKVNAALADTGIFPIGGIRSRAIWLDTWQMADGKHDYA FVHMTLKIGSGRSLESRQQVGEMLFELIKTHFAALMESRYLALSFEIEELHPQLNYKQNN VHALFKS >gi|316918893|gb|ADCU01000013.1| GENE 310 327308 - 328786 1162 492 aa, chain + ## HITS:1 COG:STM2791 KEGG:ns NR:ns ## COG: STM2791 COG1012 # Protein_GI_number: 16766102 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 13 487 8 481 482 630 65.0 1e-180 MTSPFTTGISRGLLRHQAYINGHWQSAADGRTFSVLNPANGDTIAEVSDLSGVETEQAIQ AAAEALPAWRKHTAKQRSQILQRWFQLIMQNQAELAELLSLEQGKPQAEAMGEIAYGASF IEWFAEEGKRTYGETIPSPLPGRRISTIKQPVGVVAAITPWNFPNAMITRKVAPALAAGC TVVLKPAPETPLSALALAVLAHEAGLPAGVLNIVTGTDAAAIGNVLTQSPIVRKLSFTGS TRIGKLLMEQSAATVKKLSLELGGNAPFIVFDDADLDAAVQGALAAKFRNSGQTCVCANR ILVQDGIYDEFAQRLTRAVNELRVGPASEPASQQGPLINQAAIDKVQAHVTDAVSHGARI LTGGKKHPLGGLFYLPTVLRDVNESMRVAHEETFGPVAPLFKFHDEADAIRLANQTESGL AAYFYSRDIGRIYRVAEALESGMVGINEGLISNEVAPFGGIKQSGLGREGSRYGIEDYLE VKYLCFGGIENN >gi|316918893|gb|ADCU01000013.1| GENE 311 328794 - 329615 608 273 aa, chain + ## HITS:1 COG:STM1105 KEGG:ns NR:ns ## COG: STM1105 COG3971 # Protein_GI_number: 16764463 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase # Organism: Salmonella typhimurium LT2 # 7 273 1 267 267 490 87.0 1e-138 MSAKNAMLDKATISQIAHRLHRAEQSREQIRQISLDHPQITIEDAYAIQRQWVDLKIDQG RVLKGHKIGLTSKAMQASSQISEPDYGALLDDMFFQDGSDIPIDNFIVPRIEVELAFVLA KPLRGPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILG GRPIKPDELDLRWISALMYRNGVIEESGVAAAVLNHPANGVAWLANKLAAHDVQLEAGQI ILGGSFTRPVPARRGDTFHVDYGNMGCISCRFV >gi|316918893|gb|ADCU01000013.1| GENE 312 329626 - 330438 906 270 aa, chain + ## HITS:1 COG:STM1106 KEGG:ns NR:ns ## COG: STM1106 COG3836 # Protein_GI_number: 16764464 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Salmonella typhimurium LT2 # 6 259 1 254 263 407 83.0 1e-113 MSSASLHNSFKQALKEGRPQIGLWLGLCSSYSAELLAGAGFDWLLIDGEHAPNNVQTVLT QLQAIAPYPSQPVVRPSWNDAVQIKQLLDIGAQTLLVPMVQNADEARAAVRATRYPPQGI RGVGSALARASRWNRVPDYLQLANEQMCVLVQIETREALRNLPQILDVEGVDGVFIGPAD LSADMGFAGNPQHPEVKSAIEHAILQIKSANKAPGILMAAPDVAEHYLKLGALFVAVGVD TTLLARAAEALAARFGAGKGNEPPAPASVY >gi|316918893|gb|ADCU01000013.1| GENE 313 330462 - 331838 1135 458 aa, chain + ## HITS:1 COG:STM1107 KEGG:ns NR:ns ## COG: STM1107 COG0477 # Protein_GI_number: 16764465 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 458 1 458 458 738 84.0 0 MSDSSSAVTHEANPAHRHKNLTAQQQSVINKLFRRLIVFLFVLFVFSFLDRINIGFAGLT MGKDLGLSSTMFGLATTLFYATYVIFGIPSNIMLGIVGARRWIATIMVLWGIASTATMFA TGPHSLYVLRMIVGITEAGFLPGVLVYLTYWFPAYFRARANALFMIAMPVTTALGSLVSG YILSLDGIMSLKGWQWLFLLEGFPSVLLGIVVWFYLDDKPSKAKWLSKEDKDCLQEMMDS DNLQLVQPEGARSHSALQQPSMWREVFTPIVLMYTLAYFCLTNTLSAISIWTPQIMQSFN QSSSNITIGLLAAIPQFCTIAGMIWWSKHSDRMQERKHHTALPFLFAAVGWLLASATDHS MIQLLGIVMASTGSFSAMAIFWTTPDQSISFRARAVGIAVINATGNVGSAVSPLLIGWLK DQTGNFNSGLYFVAGLLVIGAIIIWLIPMKGSRPRATP >gi|316918893|gb|ADCU01000013.1| GENE 314 331915 - 332802 735 295 aa, chain + ## HITS:1 COG:STM1108 KEGG:ns NR:ns ## COG: STM1108 COG2207 # Protein_GI_number: 16764466 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 4 291 6 293 298 473 78.0 1e-133 MSQITNIDISKDYDETQGSDDVHYQSFARMAAFFGRDMKPHRHDSFFQMHFLNTGQIELQ LDDHRYSVQAPLFVLTPPSVPHAFFTEPDSDGHVLTVRQELIWPLLEVLYPGKRDAFDLP GICLSLSDKPQELEALEHYWSLIARESVNDLGGREHTLVLLAQAVFTLLLRNVPLDEQAS CGMRGEMRVFQRFNQLIDDNFRLHWSVPEYANKLGVTESRLTDMCRRFANRPPKRLIFDR QLREAKRLLLFSDYAVSEIAYQLGFKDPAYFARFFNRLVGSSPSAYRAEQIAVSH >gi|316918893|gb|ADCU01000013.1| GENE 315 333012 - 334574 1332 520 aa, chain + ## HITS:1 COG:STM1099 KEGG:ns NR:ns ## COG: STM1099 COG2368 # Protein_GI_number: 16764457 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Aromatic ring hydroxylase # Organism: Salmonella typhimurium LT2 # 1 520 1 520 520 1055 95.0 0 MKPEDFRADNKRPLTGEEYLKSLQDGREIYIYGERVKDVTTHPAFRNAAASVGQLYDALH KPEMQDKLCWGTDTGSGGYTHKFFRFAKSSDDLRQQRDAIAEWSRLSYGWMGRTPDYKAA FGSALGANPAFYGQFEDNARNWYKRIQETGLYFNHAIVNPPIDRHKPADEVKDVYIKLEK ETDAGIIVSGAKVVATNSALTHYNMIGFGSAQVMGENPDFALMFVAPMDADGVKLISRAS YEMVAGATGSPYDYPLSSRFDENDAILVMDKVLIPWENVLIYRDFDRCRRWTMEGGFARM YPLQACVRLAVKLDFITALLKKSLECTGTSEFRGVQADLGEVVAWRNMFWALSDSMCSEA TPWVNGAYLPDHAALQTYRVMAPMAYAKIKNIIERNVTSGLIYLPSSARDLNNPEIDKYL ARYVRGSNGMDHVERIKILKLMWDAIGSEFGGRHELYEINYSGSQDEIRLQCLRQAQSSG NMDRMMAMVDRCLSEYDQHGWTVPHLHNNNDINMLDKLLK >gi|316918893|gb|ADCU01000013.1| GENE 316 334595 - 335107 449 170 aa, chain + ## HITS:1 COG:YPO1770 KEGG:ns NR:ns ## COG: YPO1770 COG1853 # Protein_GI_number: 16122024 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Yersinia pestis # 1 165 1 165 165 287 83.0 5e-78 MSLENEHRLRFRDAMSSLSAAVNIVTTDGPAGRCGITATAVCSVTDTPPSLMVCINSNSA MNPVFQENGKLCVNVLNHEQELMARHFAGMTGTSMEERFSWDIWTKGVLGQPMLRGTLAS LEGEIEQVQTIGTHLVYLVQIKQITLSEAGHGLIYFKRHFHPVMLEAVAV >gi|316918893|gb|ADCU01000013.1| GENE 317 335141 - 336037 565 298 aa, chain - ## HITS:1 COG:RSc2109 KEGG:ns NR:ns ## COG: RSc2109 COG0697 # Protein_GI_number: 17546828 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Ralstonia solanacearum # 4 297 3 296 316 249 46.0 7e-66 MDSTRTKANLCGILAILLWSTIVGLIRNVSEGVGAVAGAALIYTAGSVFLFLLLGSPKLR AFKPAYLFAGGALFASYEICLSLALGYATTRAQSIEVSVINYLWPSFTVLLSFLCNGGKL KLSLLLGVLLSLLGVTVVISGGSLTSLSGMADNIIAHPVSYILAFVGAILWAVYCVVTNK YANGQNGAALFFALTALCLWIKWLFGGAQSFTISLHSAFYIAMAGAAMGFGYAAWNIGMI KGDINLLATLSYFTPILSALFASLILSSLLPATFWLGVCAVTAGALICWLSTKKRKAQ >gi|316918893|gb|ADCU01000013.1| GENE 318 336119 - 336250 57 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRYNNPPFSRILIHKSNTIIMVITHPLLKWPPIIIRTPTRMN >gi|316918893|gb|ADCU01000013.1| GENE 319 336419 - 337264 721 281 aa, chain + ## HITS:1 COG:YPO0682 KEGG:ns NR:ns ## COG: YPO0682 COG0811 # Protein_GI_number: 16121005 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Yersinia pestis # 55 263 1 209 237 270 65.0 2e-72 MAQVHPFYSKLSAMQKIAGTILLSAGTAGFAYADTLINTAENMPPNVSTGEISSLDLSIF GMYQQADIVVKSVMIGLLVISVITWTILFAKGIALLRAKRKLQQEYRLLFPSLSFTTACE LSQSFEKDSISAALLNDAQDEKQLSAQMLDLNGIKDRANFRLDRRVAAYGRSLAKGNGYL ATIGAVAPFIGLFGTVWGIMNSFIGIAHSQTTNLAVVAPGIAEALLATAMGLIAAIPAVV IYNLFNRLIGEHRAQVGDAAAQVLLLLSRDLDLNAANQHQG >gi|316918893|gb|ADCU01000013.1| GENE 320 337271 - 337705 532 144 aa, chain + ## HITS:1 COG:YPO0683 KEGG:ns NR:ns ## COG: YPO0683 COG0848 # Protein_GI_number: 16121006 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Yersinia pestis # 1 144 1 140 143 177 66.0 6e-45 MALQINDYANGGVDDNAELHDINVTPFIDVMLVLLIIFMVAAPLATVDIRVNLPASSAQP QPRPDKPVYLTIKADKQLYLGDTLTTSDNLSVQLDEQTKADKDTTIFLQADQAVDYATLM SVMDALRNAGYLKVGLVSLESATS >gi|316918893|gb|ADCU01000013.1| GENE 321 337760 - 338653 621 297 aa, chain + ## HITS:1 COG:PA4705 KEGG:ns NR:ns ## COG: PA4705 COG3016 # Protein_GI_number: 15599899 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated protein # Organism: Pseudomonas aeruginosa # 16 287 10 280 295 207 43.0 3e-53 MSTKFSLKSLIILATLALSACSQPTLTLPSRPSALKEIETTGKIIDLRSGDSITSQQLLT QLASAPRLIVGEKHDNEKHHLIEMWLIKNLPQQRPQGSVLLEMLTANQQPRVDQLKQWLK DDPMVREGRIQHLLNWEQGWPWEMYHGVVMQALRAPYPLLVANINRDRVQDLYKNPRIPV GKISTAPDVQNAIRETITNMHDGKIDQTQLNAMLAIQQQRDRFMAQQLLAAPAPALLIAG GYHAAKQMGVPLHMQDLAPASRPVVLMLAETGMNITFAQADYVWYVPLPEANSLAGL >gi|316918893|gb|ADCU01000013.1| GENE 322 338653 - 339438 558 261 aa, chain + ## HITS:1 COG:YPO3918 KEGG:ns NR:ns ## COG: YPO3918 COG0810 # Protein_GI_number: 16124050 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Yersinia pestis # 1 255 1 264 267 121 34.0 1e-27 MDILYSTQPKWGRWFVFTLTLHGLILLALVWRNADAYQPYQPPPAVMLQWSEAIEAPASP LPLPIGIAQQQQSAAAEEKQQAEDKAQPKLALAKDAKIEVAKQKKSTEGEKKKPRPVRKI KDQTSDASQAAVASNAAPQANTLSSRIAAPFNSDASRHNSEKVTWESLVKGHLNRYKKYP TDARRRARTGQAIVTFTVNASGRVQGNQLHTSSGTISLDREALAVLERAQPLPKPPAEIL SDGRYSVTMPINFDLNELRQP >gi|316918893|gb|ADCU01000013.1| GENE 323 339536 - 341641 1458 701 aa, chain + ## HITS:1 COG:YPO1780 KEGG:ns NR:ns ## COG: YPO1780 COG1770 # Protein_GI_number: 16122034 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Yersinia pestis # 27 696 4 681 683 821 57.0 0 MFRSWHHALLALLVTILSWQTAAEPQPPVAAVVPKVLTEHNDRRIDNYFWLRDDSRSEPK VLRYLQAENQYADAVLRPYQALRETLYQEMVSRMKPEDSSVPYQRNGYRYQDVYLAGKDF ALTQRQPLGGKLIWQTLLDGNQRAAGHAYYRLGGIAISQDNHMMAVAEDFQGRRQYRLSL RNLHNGAWLTDVIENTSGNMLWSNDGSSLFYVRNHPQTLMPYQVYQHRIGTPLAQDRLIY QENDGAFYLTLSRLTSDRYLAITLGSNTTSEVHLLDADHPDAQPVLFAARRSGVEYYLDH FNSTFYLRSNHENANFGLYQAKNNHDVWQPLVAPQNDNMVEGFALFQNWLVVAERRDGLS QIRKINWKTHAEQTLDFDDASYMAWLGYNPDPQTHQLRYGYSSMTTPTSTYAWDLNSGQR TLLKRQDVKNSHPADYHSKRLWITTRDGVKVPVSLVYNQKMFKAKQSPLLVYGYGAYGMS MDPAFSAHRLSLLDRGFVFAMVHVRGGGELGQQWYQQGKLANKPNSFNDFIDATQGLVAR GFGQPGRLYAMGGSAGGLLVGAVMNQHPELFNAVVAQVPFVDVVTTMLDDSLPLTLGEYE EWGNPHLLADYQRMKSYSPYDNIKPMHYPNLLVTTGLHDSQVQYWEPAKWVAKLRANQLG SGKILLLTDMQAGHGGKSGRLKRLENTALEYSFILAADRQQ >gi|316918893|gb|ADCU01000013.1| GENE 324 341698 - 343962 1630 754 aa, chain + ## HITS:1 COG:Cj0178 KEGG:ns NR:ns ## COG: Cj0178 COG1629 # Protein_GI_number: 15791565 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Campylobacter jejuni # 40 754 25 755 755 435 37.0 1e-121 MKLNKIAGLIGSGMVLLSAGAYAQSTSEETSGDKKGSAVFSPLNVSAGKMTSEQEALDKP GATSSRATDKNLESLDSTLRSMPGTYTQIDPGQGSVSVNIRGMSGFGRVNTMVDGITQSF YGTSTSGTAIHGSTNSMAGVLIDPNFLVGVDVTRGDSSGSSGVNALAGSANLRTIGVDDV VFTGNPFGVRSRFSVGSNGIGRSGMIAAAGKTNAFTDTGSFGAMAAISGSSVYSNFDNGD GINSEEFGYDKFMKQNPKSQLYKVDIKPNEFTSFELSARTYQNKFSRRDITSDDYYIKYH YSPFSELIDLNVTASTSRSEQQYQDGSLYTFYSTSARNRSNALDINNTSRFTLGNNDLAF SLGGKLMRTRYDKLIKSNAGDPQSSQESIENNPFAPSGNQDISALYTGLEITRGIYQANL NLNYTQNKISGFKPACDPRVTCVPQGEYNVDEKESGFNPSVLLSAQVTPWLQPFVSYSKS MRAPNIQEMFFSNSGGASMNPFLKPERAETYQAGFNINTQDLLLKEDSLRLKALVYRSKI KNYIFSESYLVCTNGRKCNMTEVNANDWEDVSDYSDNMYIYVNSDSLVRAQGFELEMDYD AGYAFARLAYSQQHTDQPTSIASTYFGAGDITELPRKYMTLDTGLRFFDQSLTVGSVIKY TGKTRRLSPNFDFDEKTGAIVKEEMPQIPTIIDLYSTYEFNRNFMLKFSVQNLMNKNYSE ALNKLNMMPMQGDESTAANTARGRTYIFGGEIRF >gi|316918893|gb|ADCU01000013.1| GENE 325 344033 - 344359 323 108 aa, chain - ## HITS:1 COG:RSp1275 KEGG:ns NR:ns ## COG: RSp1275 COG1742 # Protein_GI_number: 17549494 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 1 107 1 107 110 125 71.0 1e-29 MLIFKALILFSLTALAEIVGCYLPYLVIKQSKTLWLLIPAAFSLIIFAWLLTLHPTAAGR TYAAYGGVYIGVALVWLRFVDGVALTRWDITGACVALVGMAIIVLQPS >gi|316918893|gb|ADCU01000013.1| GENE 326 344465 - 345910 1121 481 aa, chain - ## HITS:1 COG:ECs5062 KEGG:ns NR:ns ## COG: ECs5062 COG1538 # Protein_GI_number: 15834316 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 15 481 13 480 488 401 46.0 1e-111 MRKMESAARFWRYSSIAFALFLLSGCALIQDDPGKVPIVNPQQAQLSQVIHLANSDWPAA RWWEGYHDAQLNMLVNRALQNSPTMQAARLRISQSQSTVELAQSAMGIQATAVAAQNRMR VTNKEFTWPYSYSLPIDKNGPWYTLNTVGVGATLNIDLWGADRARVAAAIGEKNARLAET AGIELDIASSVAQLYFAMQSTYQQIALLNQLQDIASLSVQAHEQRTHRGLEDSVAIANAR SELLAAQQQVIAANGTLTQYRETLRALMGADAHSMPDIHPVELPAVQQTLPDSLSFELLA RRPDLQALSGYVTASMSQVDAAKAAFYPHFDIKAFWGYNALNVGDLFKSSFQQINLLPGL YLPIFDGGRLNANLKSVRTASNILIKQYNQAVLDAVRDVAMSSSQLNDLNQQVALQNQKV TEAMTVTQSASAHYQRGLLSRYAAQEARRSTITQQLLLLDMRAQQLSTDITLIKALGGGY R >gi|316918893|gb|ADCU01000013.1| GENE 327 345907 - 347859 1181 650 aa, chain - ## HITS:1 COG:yjcQ KEGG:ns NR:ns ## COG: yjcQ COG1289 # Protein_GI_number: 16131907 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 37 542 1 515 636 255 34.0 2e-67 MWNFWQFLTRELSAAPGRGNYTLRLTLSCAVLITLFMALQIPFLAVALIVVFYVSQPNVL MIKLVSVVFFITVSVALGGVILIIKWTYDYPLIRLVASVFLFFCSMYLMRILGKLGMAFF VMGLVVIYAQTFPSMTSQSEVLVRLLLWLWVAINTAILVTLLVNACFLQAFPGYQFKSRL ALMFREVSSLLAGNHADKKRPTLKDIADQFTQLQSLYKQANRSSSDIAARPQAWQSMMGA AVRCYHLAVLLQPMNSASENHAHAQQLSAMLGELALHLDDGKLPDIQPFPLTDDMANGAI LREISTIVGKLARGEEVPLPAGEVEKEPLLAPDAWSNPTYLHFALKTLLATLLCYVFYTA ADWQGIHTIMLSCVIVAQPGLGATMQKTWLRIGGALIATLLALLLLVFIQPYTDSIIGLL AMSLPVMALSAWIAAGSDRIAYAGIQIGFTFSLAFLNWFGPLTNLTELRDRVIGILLGVL VSSIVHLYLWPESEAPKLKSSLARLYNQAAKYLAARGEEIKILPLFHALATTESLINRVA AEPINTYAYPYPEVRRWPVKSCFNQVQEVVRLSEGYRLYAPQGDDFLQRCAARLQDYANS IEQPQVKIPSSFTATGSAGNPFGPPLTAALAMLPHWHSATSDIQQQANQQ >gi|316918893|gb|ADCU01000013.1| GENE 328 347869 - 348897 930 342 aa, chain - ## HITS:1 COG:ECs5064 KEGG:ns NR:ns ## COG: ECs5064 COG1566 # Protein_GI_number: 15834318 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli O157:H7 # 1 342 1 343 343 381 59.0 1e-106 MTNSSSSLLRKKWPLLALVLAAILALIVVIWQLQTSPETNDAYVYADTIDVVPEVSGRIV EMPIRDNQRVKKGDLLFRIDPRPYQAMLDDAKARLTTLDAQIALTQRTIKAQEYNAQSVT AAVERAKALVKQTTSTRARLEPLVPQGFASQEDLDQARTAEKAARAELEATLLQAKQASA AVTGVDAMVAQRAGILAQIALAELHLEFTEVRAPFNGIVVALKTTIGQYASALKPVFTLM DDEHWYVIANFRETDLKNVHSGVPARVTVMTNHGKSFSGVVDSVGSGVLPDGGSVFEGLP VIQKTINWVHVSQRFPVKIAVKDPDPNVFRMGASASAVLQPE >gi|316918893|gb|ADCU01000013.1| GENE 329 349010 - 349294 77 94 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNIWQGISKKAPTNKQKNQLGNAALNTGITGDNEQPDAKSGDNNSAGRISFIKQFKGCYL SIYSVFESKFNELILSPLHICSFIVTIGNIFMLL >gi|316918893|gb|ADCU01000013.1| GENE 330 349366 - 349671 321 101 aa, chain - ## HITS:1 COG:no KEGG:ECS88_1014 NR:ns ## KEGG: ECS88_1014 # Name: cbpM # Def: chaperone-modulator protein CbpM # Organism: E.coli_S88 # Pathway: not_defined # 1 101 1 101 101 164 82.0 9e-40 MANVTVTFTITEFCLHTGVSEEELNEIVGLGVVEPSDYESTTWLFDDHAVTVVQRALRLR QELALDWPGIAVALTLLEENTQLRQENRLLRQRLSRFIAHP >gi|316918893|gb|ADCU01000013.1| GENE 331 349671 - 350588 912 305 aa, chain - ## HITS:1 COG:ECs1155 KEGG:ns NR:ns ## COG: ECs1155 COG2214 # Protein_GI_number: 15830409 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Escherichia coli O157:H7 # 1 305 1 306 306 551 90.0 1e-157 MELKDYYAIMGVKPADDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQ RRAEYDQLWQHRNDPQFQQFQQREGQSYSPEDFDDIFSSIFGQHGRQSRQRPAARGHDLE IEVAVFLEETLEEHKRTISYNLPVYNAFGMVEREIPKTLNVKIPAGVGNGQRIRLKGQGT PGENGGPNGDLWLVIRIAPHPLFDIVNQDLEIVVPLAPWEAALGAKVAVPTLKDSILLTI PAGSQAGQRLRIKGKGLVSKNHTGDLYAVIKIVMPPKPDSASAALWQQLADAQSSFDPRK EWGKA >gi|316918893|gb|ADCU01000013.1| GENE 332 350729 - 351433 267 234 aa, chain - ## HITS:1 COG:ECs1915 KEGG:ns NR:ns ## COG: ECs1915 COG0664 # Protein_GI_number: 15831169 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 7 220 18 235 250 85 27.0 9e-17 MNSQLCVDCQHCIFSEICKECMFTQNIPIFNRAFQRKVFLSQGRALFNIGDKVKYLIAIR SGCLKIIDQDNILLNLQTPGQLIGGEDLHNGYYRTSAIALQDTEVCMLDYSEMYGLSQIT LGTFRNMVNLLSETAYENQQMIKVLVQPDAFLKVTSFILLMAERNKIKFFTEDNFSLPLT QKDLSSLLGISPVTLRRVLDKLERDVGGITIHDRKVVIKDIAQVRRSIRLHLMS >gi|316918893|gb|ADCU01000013.1| GENE 333 352146 - 352709 289 187 aa, chain + ## HITS:1 COG:YPO1707 KEGG:ns NR:ns ## COG: YPO1707 COG3539 # Protein_GI_number: 16121967 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Yersinia pestis # 1 186 1 179 180 74 36.0 9e-14 MKLNKFAVVISGVAFSLGMASMASATSTGTITFTGEVTDTTCEVSVNGDGADATVTLPTV PATELKTTGLTTGRTNFDLQLSNCSVGADGANTVSAYFQTGATVDTTSGRLKQTDTSGAQ NVSLQLRDGTNSNVIFVGSSTQQSTNYYANIASATSVTLPYSVEYYAEDAATAGAVSSSV VYNLQYK >gi|316918893|gb|ADCU01000013.1| GENE 334 352828 - 353496 256 222 aa, chain + ## HITS:1 COG:ZecpD KEGG:ns NR:ns ## COG: ZecpD COG3121 # Protein_GI_number: 15799824 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 EDL933 # 2 213 23 235 243 184 41.0 1e-46 MSAAHANVVLSGTRVIYPETEKEVTLKVNNKGKTPVLIQSWIDTGNANASPDSISSPFLL TPPMNRIDPEKGQTLRISYTDVNSLPKDRESLFWLNVLEIPPKVNDSATPNHLQVAFRSR IKIFFRPTGINGDAFHAAESVQWTLQNNAMVAKNDTPYYVNLLGIHTTENSHKIVAEGTM ISPFSSITVKINPTISPRPGDKLSYDFINDWGAVKTTEFILR >gi|316918893|gb|ADCU01000013.1| GENE 335 353520 - 356087 1077 855 aa, chain + ## HITS:1 COG:XF0081 KEGG:ns NR:ns ## COG: XF0081 COG3188 # Protein_GI_number: 15836686 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Xylella fastidiosa 9a5c # 27 854 86 901 901 587 39.0 1e-167 MKRSLPFRLTRLAAIIIASSGSFYSYAQTENNSGSKVVEFDPIFLSPGSAQKVDISRFEH GATALPGIYKADVFVNNMNIGTESIQFKEQKDKSVQLCLSPVTLQRLSLDTEQLPAEVLA QMKTGDGENTPCLLVSQLLPWISSTYDSGAQRLDLSIPQARLQNHGRGYVSPELWDNGVP AALLGYNGSYYSMRSHSKTTDSAWLSLNAGLNLGEWQFRHNGNLTWQERVGKSYQRTNTY VQRDLTNLRGRIIMGENNTSGSLFDTLPFRGVELVDDERMLPQSERGYAPVIRGIARTNA RITIRQNGQVIYESTVAPGAFNITDLYPTGAGGDLDVTVTEADGSIQNFKVPFASVNQLL RPGTHHYDFIAGQLNDTNLSSRPELYQLSWQQGLTNTFTGYGGVQFNSHYYATQLGTAIN TLLGALAIDTTHARTQFDSNQADYTKDRSGQSYRVTYSKFVPETDSNFAIAAYRFSTSGY LDFYSAMQIQDALNNGRTPSSNYRAKNRLTATINQGLPAGFGQFYLTGYVQDYWNQQTKS DLQYQFGYNNVFHSVTYGINAGRIRNGSGDMETTYQINFSVPLGSAGNANTPQLTSAFTR DSSGNTGQQLGVSGSAGEDHQYSYGVTASHYDNGAGTSGSANAQYRSPITNITVSTGVGK NYQSSSSGLSGTIVGYKNGVVMTPYTSDTFAIIEADGAEGARVGGYSGVRVDRFGHAAVP YLNPYEMNEVSIDPKGLSNTVELDNTSQKVAPHAGSVVLVKYGTRTGYLILIHVTTDTQQ PLPFGSDVMDSNGDNVGSVGQGGIIYARVTKPRDTLQVRWGEHANQSCHIPYRIMPGTDK SAKKAMTRFESTCQE >gi|316918893|gb|ADCU01000013.1| GENE 336 356520 - 357329 252 269 aa, chain + ## HITS:1 COG:no KEGG:ESA_03812 NR:ns ## KEGG: ESA_03812 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 1 268 124 383 384 112 32.0 2e-23 MAGVGAVVWYSGHAFTMSSPYTQTTLNYNPGAGVSSTLSFARSVDISFIKTGEISGGFVN GSSLPTVILYSPSVPGYSGLPATYWTLKFSGVIGITSGTCTTPNVNVNLGSHDLRTTFTG KGSTSEWVDSSIILEDCPAFLGNYPYSNPQKTTTTTTSSGASTPTGTPTSNKLVLSLTAS TGVIDGTNGVVALSNEDGQASATGIGVQIGYNSTTNPTLWNFSNTWSYNIPNNGSPSITL PLAARYYQTSDVVTPGTANSSVIFTISYQ >gi|316918893|gb|ADCU01000013.1| GENE 337 357356 - 358120 153 254 aa, chain + ## HITS:1 COG:ycgG_2 KEGG:ns NR:ns ## COG: ycgG_2 COG2200 # Protein_GI_number: 16129131 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 16 244 23 252 271 140 30.0 2e-33 MANLPLTNQDIFTYMDGDVIPYIQPIIDSTTNALVGAEVLMRIKRNDGTIIPPSDFINKI EQEGKLISATRVIMNKIIHFFKNKAEKLPEGFYFSFNISAAHFHDDELANDCQNFIDAFN GKIGLVIELLECSILEFNHKTITTIKLLTKKGVRFALDDFGSGLSRVIYFHYAPISIVKL DRTLMKSKKNRMEYADVLNALYAFSQQLNLTVIAEGIETESQKKKMSEIGVKYHQGFLYS KPVSEEVFTLNFLH >gi|316918893|gb|ADCU01000013.1| GENE 338 358131 - 358736 -148 201 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNEIKCYFEPTDSYAKIEIMEHIEATSNKRPIEINSINELTHVKDGQKIILFLSKISHTA RCLCNYRHLNIVVIDIIDDMSTPCSISRRTINIRQPVEAIFNTLDNIIDKHSNTFSCECC NILFGLSPIEKKLIQMLRSGEQRTEALASKMGVNSKTVSRHKRSIMSKIKIDNSISFYKW VERLDNHRNIEVNYIASRHFQ >gi|316918893|gb|ADCU01000013.1| GENE 339 358851 - 359744 159 297 aa, chain + ## HITS:1 COG:ECs3704 KEGG:ns NR:ns ## COG: ECs3704 COG3710 # Protein_GI_number: 15832958 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Escherichia coli O157:H7 # 1 105 1 107 269 64 31.0 3e-10 MKYKINNTIEFDDKTGILSNTESGSIITLSTTAIRIFAYMLKNPNNIISREDFFENVWDI YGQEASNNSLNQYLSLIRKAFRNIDISYEIIHTEPRKGFYLKADVEYIEDDFSSSPHGEQ IGIAEQKNKLEKNIIIEEAQQSDESLSKKMLPVEFGTIVNNSQVKQNIIRKRNKTIFLIF LALAFSGTGFFISQFWPSSSKDIPTVTLYKLGVIDSCPVFTLYESSNEMADHKINIAREL ITEHSLPCLINTIYIFQPDDFLVYTKKGRVLLSRCTTVDHEKKRKFAGCKDIYIYEK >gi|316918893|gb|ADCU01000013.1| GENE 340 359941 - 360222 66 93 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLTGENDKNDAKVFISREIHFSYEWKDEGQLKLYNIKTIKFQSDDIKDSAFKESILNFD LPEIYMIVHRLNNSYILGSLSSPITVCVDKDES >gi|316918893|gb|ADCU01000013.1| GENE 341 360813 - 361997 570 394 aa, chain - ## HITS:1 COG:ECs0311 KEGG:ns NR:ns ## COG: ECs0311 COG2814 # Protein_GI_number: 15829565 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli O157:H7 # 1 392 1 392 397 462 72.0 1e-130 MSALSFKTSHNKIHAHWSGVFAMTLCVFVLIASEFMPVSLLTPIARDLHVTEGLAGQGIA ISGALAVLTSLIISNVAGSLNRKHLLLGLTLLMAVSGMIIALASNYQVYMIGRALIGIAI GGFWSMSAATAIRLVPQHQVPRALAIFNGGNALATVVAAPLGSYLGATVGWRGAFLFLVP FAIAAFIWQYIGLPEMKSDKVNKPSRSVLRLLRLTTVSTGLLACGLFFMGQFALFTYVRP FLETVTKVNASFLSLILLAMGLAGFAGTLLITLFLNARFYLTLMIIPLVMASIAGTLLLV GQNLWGVTVLLSLWGMIATAAPTGWWTWIARTLPEDAEAGGGLMVAVIQLSIALGSTAGG LVFDSLGWRSSFGLSSLLLLGAVGMTFITSRQNR >gi|316918893|gb|ADCU01000013.1| GENE 342 362193 - 363251 839 352 aa, chain - ## HITS:1 COG:ECs0310 KEGG:ns NR:ns ## COG: ECs0310 COG1073 # Protein_GI_number: 15829564 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli O157:H7 # 1 352 27 378 378 637 88.0 0 MSYADVTNPNAPVSMTEKWDKTFAESTKVAHRKVIFQNRYGISLVGDLYIPKNRAGRKLA AIAVSGPFGAVKEQSSGLYAQTLAELGFVTLAFDPSYTGESGGYPRNVASPDINTEDFSA AVDFLGLQTEVDRNRIGLLGICGWGGMALNDAAMDTRVKAVATSVMYDMSRAMGHGVGDG KDRYTTSDRRAVLQYLNAQRWKDAERGTFATGGHDVYVDEKGNVSAADRILPEALPTDPH PVLKEFFDYYRMPRGFHARSVNSTGAWTATMPLSFMNMPLLSYANEITIPVLIVTGEKAH SRYFAEDAFNAVGSKEKELVVVPEANHVDLYDNAAGKIPFAKFEQFFKTNLR >gi|316918893|gb|ADCU01000013.1| GENE 343 363529 - 364425 616 298 aa, chain + ## HITS:1 COG:ECs0309 KEGG:ns NR:ns ## COG: ECs0309 COG0583 # Protein_GI_number: 15829563 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 294 7 300 300 510 84.0 1e-144 MAKRENYNELYLFMQVVREGSFTAAAQRLGLAQSGISRSIRELEERLGVQLLVRTTRKLS VTQAGEQLYRTVESGFDALDMGLATLAHYRQTPSGTVRINASQHAIDKVLLPKLAMFKQR YPDIRLELISESRFVDIIEERFDAGVRLGSDVGHGMVAVRISPDMEMVVVGTPEHFRRYG FPQTPADLVVHPCIAYQFGDGSLYAWELNDDGKKITHRPQGQWAFADSYMEAKAARLGLG LAYVPEELVADDLVQGSLIRVLQRYSQRLDGSFLYYPHRNVSPALRIVIETLKMDINR >gi|316918893|gb|ADCU01000013.1| GENE 344 364627 - 365595 622 322 aa, chain - ## HITS:1 COG:BS_ydjE KEGG:ns NR:ns ## COG: BS_ydjE COG0524 # Protein_GI_number: 16077684 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Bacillus subtilis # 1 313 1 316 320 277 47.0 2e-74 MPNHHIACLGELLIDFVCTDIGLGLKQGTQFLKKAGGAPANVAAAINRSGGHAKLAAKVG DDPFGDFLLHTLASEGIELSGVTRSATPTTLAFVGLQDDGERDFSFFRGADGELGWQDIP SDFLDDVSIVHFGAAAGLLDGELYVTYRRLLREAKQRGLLISFDPNYREGLWGKEPQEFI ARCKPWFQHADIVKVSEEELHFITDAKTITEGCRVLHEFGVSYIAVTCGDRGTWISHKSG MQQLIPSVPVNAIDSTGAGDAFIGALLQQINQSGCRLDDPTQFLHAVHWANICGALTCTQ FGAIDAIPTAAEVDAIFLSRGA >gi|316918893|gb|ADCU01000013.1| GENE 345 365595 - 366971 911 458 aa, chain - ## HITS:1 COG:no KEGG:Kvar_5014 NR:ns ## KEGG: Kvar_5014 # Name: not_defined # Def: inulin fructotransferase (DFA-I-forming) (EC:4.2.2.17) # Organism: K.variicola # Pathway: not_defined # 1 451 1 452 457 687 72.0 0 MSSNNYYDVTEWNIGNPYDDIGEVINSIIADIKNRQTNTDINEGGKPGAVIYIPPGDYHL LTQIVIDISYLKIMGSGHGFTSSSIRFNTPESDWPNWHELWPGGSRILVDMSPAEGAAES AGAAFYIARSGDPRISSVEFADFCIDGLHFVDDGSGSDDPENSYLNGKTGIYIASAQDSF RISGMGFVYLEHGVTIYNADALAIHNNFIAECGNCIELRESGQASKITDNLIGAGYRGYS IYAENFGGLLITANNIFPRGKSVVHFSNVVRSSISSNRFHAFYPGMLIMENGSAENLVSS NHFFREREPWAPMQAYNNGLDDLYGLLYISGDNNSIIANHISESIDTQYITPTGATPVII RVVSGKGNTISNNHVVATTETSDGQAEADASACFSTQVSALLATDGLAALTVIAVQIEAA SQQNTVLDSGTDGQVVMDKTVNAFRATPTPGATVEGYC >gi|316918893|gb|ADCU01000013.1| GENE 346 367026 - 368714 844 562 aa, chain - ## HITS:1 COG:AGc1721 KEGG:ns NR:ns ## COG: AGc1721 COG1621 # Protein_GI_number: 15888283 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 15 533 1 514 543 207 31.0 4e-53 MSLSFNIKQGQRIDLWLRETKPASHPLFSIRMENEVVFKVTTAPRYYHYFTWTAWQDGTV CLDWLPENSEISLCYSWHPDTLPENGVSFIATEDNALCLLSDRDVATAYLQDPLRPALHF SPRTGWMNDPNGLHRKGDEWHLFYQYHPHSTQWGPMHWNHAVSKDLYHWRHYPVFLQPEQ NLAALGATGGAFSGSAFTDAQGKTRFWYTERLPAYDLYRGYREIQKMVVPLQSYDKPASV TTVLTELPPGVDCDFRDPKVWYEEADATFYMILGAAVNGDPAMLLFHSADSENWTFHHVL YVAPAYFRENGGRCVECPDFFCLDGVWVLIIGVVGYTEPVTGRHNLLFAQTGDFRDGYFI PSSHPLQMLDFGTDFYALQTWGEEDARTGFAWLYNWATQKNVESSYCGEMSLPRRFHLNA QQQLCMTPVLPPESLVINQTRLADNERWSSTEVNRACTIAFTPTGAFCLTLSGDNGQEIV LEFDGNVLTLREKGQDDGRYRAPLASVEDVMVCFDAGIVEVFSNGGSVCGTRRYYSCSAL TQVHLSGAPAILTQYRATYAYK >gi|316918893|gb|ADCU01000013.1| GENE 347 368698 - 370119 593 473 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020673|ref|YP_526500.1| ribosomal protein L9 [Saccharophagus degradans 2-40] # 10 455 4 520 522 233 29 1e-59 MSATSAEKHSAYEKLSLKEKIGYGMGDAGSCMIWSVLALYLTWFYTDVYGLDAGIVGTLF LVIRVFDAFSDPIMGAICDRTRTRWGKFRPWLLWMAVPFGLGAVLMFTTPDLSMNGKIIY AWVTYLVMSLIYTAINIPYCSVAGVITLNQKERLGCLSWRFFLNGLATLIVSSSILPLTD WLGNGNRASGFQLTMMMMGGAATLMFLFCFSSIKERVVSIKANDSLRKDLKDIIKNDQWL LMISITFLNVFPAFIRGAVTIYYATYVMKASVGFITFFMALGVACNMLGSVIAKPLTDRF DKIKLFRIINIILGILSFALWFVDPHSLTPLLALFIVINILHLIQSGPILWAMMSDVDDY GDWKFGKRLTGISFAGNLFMLKMGLAVAGAIVAWILSYTGYIANKPQQNEQTLQGIIIMF SLLPMVSYFISAYIVRYFKLNNLLLEKIKVDLAKRELENGSAQNQEYKDVPVV >gi|316918893|gb|ADCU01000013.1| GENE 348 370237 - 371247 354 336 aa, chain - ## HITS:1 COG:BS_degA KEGG:ns NR:ns ## COG: BS_degA COG1609 # Protein_GI_number: 16078147 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 3 332 4 336 337 139 27.0 6e-33 MASIKDVAKKAGVSTATVSRVLNNHPSVVPETRQAVRDAMDYLCYVPSKSAFQLSGKRSG LVAVVLPNLVNPHFCELLATFEEEARYIGKTVIVKTHQNQPQQDKQIIHTLIGMGIDCLL WVPTEAEAELAEWLTATRIPVAVVTQVSRFFNSVSINQSKGAASIAEHFIQTGHTSFGFI AQESVDTRKVSSWTKKITSQGFTLDRENQFWIAKGEGEKTSGHISILDDIIEKLASRRQR CSCLWVYNDVAASYIIDGLKEKGVSVPKDIAIASFDNTLLAQTKRITSVAQPIHEIAHLA FQMVKNENNREGIEMYEITSRLIIRESSVNINVTIL >gi|316918893|gb|ADCU01000013.1| GENE 349 371637 - 371864 100 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFGYVAVTLSACWEKPLVIECDQKRRTSETVISWLAAIRNYDLLFMMLTKNKGKKRIKTT LFLPSGMIERQALQG >gi|316918893|gb|ADCU01000013.1| GENE 350 372030 - 373085 764 351 aa, chain - ## HITS:1 COG:RSc0632 KEGG:ns NR:ns ## COG: RSc0632 COG1064 # Protein_GI_number: 17545351 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Ralstonia solanacearum # 7 351 5 349 352 491 65.0 1e-138 MTLNVKGYAAFGAKEDLVPHNFVRRDPRDNDVVIEILYSGVCHSDIHNAFNDWGGAKYPM VPGHEIIGRVIQVGKAVTKFRVGDYAGVGCMVDSCQHCKPCEQGLEQYCEEGNTLTYNDV DRHDHMPTYGGYSDKIVVTEKFVIKVPETLDLKGAAPLLCAGITTWSPLRHWNVGPGSKV AVVGLGGLGHMAIKLAKALGAEVTLFSRSPNKETDARRLGASHIVISTDEKQMQGAHNQF DLIIDTVPYVHDLNPYIPTLALSGTLVLVGYLGDLNPMLNSAPLILGRKSVAGSVIGGIA ETQEMIDFCAEHQITSDIELINIQDINTAWQRMLKSDVKYRFVIDVASLQS >gi|316918893|gb|ADCU01000013.1| GENE 351 373166 - 373993 881 275 aa, chain - ## HITS:1 COG:RSc0215 KEGG:ns NR:ns ## COG: RSc0215 COG1028 # Protein_GI_number: 17544934 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 1 273 1 272 275 311 62.0 1e-84 MKDVIVVIGSGSIAQAIARRVSVGKHILLADIKIENAHQAENTLSRAGFEVSTTTVDVSS RQSVQALVNTASALGDIKGVIHTAGLSPSQAKAQDLIRVDLYGSAVLFEEFGKVIAAGGS CVVIGSQSSHRLDVDALTQAQADALATLPPEDLLELPLVKEIKDSLYAYQISKRCNALRV MSEAVKWGKRGARINCISAGIVYTPLAYDELNSVERGAFYRNMLDKSPAGRGGTPDEIGA LAEFLFGPNGTYVTGSDLLIDGGATASYKYGELRP >gi|316918893|gb|ADCU01000013.1| GENE 352 374667 - 375797 413 376 aa, chain - ## HITS:1 COG:slr1760 KEGG:ns NR:ns ## COG: slr1760 COG3706 # Protein_GI_number: 16329649 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and a GGDEF domain # Organism: Synechocystis # 214 373 145 310 315 156 46.0 8e-38 MEQHSNNKRRTFNTARMWQNYSDMVRQALSVSIPWFTFVNVSFALIILFRNFLISHFDRS LGTHTEILPFIDEITVGIIVLSLMLVLFIYRLPARFTPLCVAMLMTISLMWSYCSFYFIV WWQLPFAWPLSVILMLTALAALYYHPLALLLFITPLWLTTLLASVQLNQGVNIRFLLVWL LLTAILIYGRVILQRWFNEAWLRYQENRMLIARLDVMAHQDVLTGTANRRSMENFLDDAL LQAEPFALLMLDVDYFKRYNDHYGHQAGDACLVKVADIVKTSVRTPADLVARYGGEEFVI VLPASSLDDAVRVAERIQTNLREISLPHAASEVSEMVTVSMGITLSKDGDSAYGIIARAD EALYRAKQQGRNRWEK >gi|316918893|gb|ADCU01000013.1| GENE 353 376518 - 376775 182 85 aa, chain + ## HITS:1 COG:STM4501 KEGG:ns NR:ns ## COG: STM4501 COG3811 # Protein_GI_number: 16767745 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 85 1 85 85 133 95.0 9e-32 MNLSRQEQRTLHVLAKGGRIAHIRDASGRVTSVECYSREGLLLSDCTLAVFKKLKTKKLI KSVNGQPYRINTTGLNNVRAQLDNR >gi|316918893|gb|ADCU01000013.1| GENE 354 376786 - 377697 719 303 aa, chain + ## HITS:1 COG:yjhP KEGG:ns NR:ns ## COG: yjhP COG0500 # Protein_GI_number: 16132127 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 56 303 1 248 248 475 91.0 1e-134 MTNPSLTFHVASEGDTDDILDVEARAFGYSKEANLLAEKNEPYSLITHSMKGMPTLDIPR IFTISESEHRIHNPFTEEKYATLGRVLRMKPDTQILDLGSGSGEMLCTWARDHAITGVGI DMSQLFSEQAKRRAEELGVSERVHFIHNNAAGYVANEKCDVAACVGATWIAGGFAGTVEL LAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSIADFLTLPELVSAFDDLGYDVVEMV LADQEGWDRYEATKWLTMRRWLEANPDDDFAAEVRAELNISPKRHVAYAREYFGWGVFAL IAK >gi|316918893|gb|ADCU01000013.1| GENE 355 377825 - 378076 192 83 aa, chain + ## HITS:1 COG:no KEGG:KPK_4970 NR:ns ## KEGG: KPK_4970 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 83 1 83 83 143 95.0 2e-33 MSQHEQFCQACGMPMSAPDAHSTSDTYCAYCSDSNGNLKPWEEAVSGLAGFLDSWQKVGP EEAKKRAKRYLTAMPAWAHKADE >gi|316918893|gb|ADCU01000013.1| GENE 356 378508 - 378828 251 106 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKKRSIGRMIARAKAIANKPDAKSELELLKTPPKNRTEAKKQLALKLKLVRSGALDSKS LRALSKQSEQALLIANALRFDEGLVDPVSTDKTSDSNKRWRGRTAD >gi|316918893|gb|ADCU01000013.1| GENE 357 379472 - 380155 -73 227 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPHIILTKDVYLKKALSVILQQVPADRKLCIIDIESFRSLGAIFNILKRKLSTDNRQLIF IGGKNVSSRVLEPLVTLYRKSSFIDFRRQLISGRTYTLEYALNHIAGCRNLSMLTRKEKK AIFALLDTDDIQTAAMKINLSPKTIYTYTYKIGIKMNLCSILQLRQFIYSEFKLDKESLL DCSFPLKIKSSHSPLRSNPLITPIGLKSLHTMPHDCGIEIISCCSFA >gi|316918893|gb|ADCU01000013.1| GENE 358 380217 - 381587 1470 456 aa, chain - ## HITS:1 COG:YPO3028 KEGG:ns NR:ns ## COG: YPO3028 COG3468 # Protein_GI_number: 16123205 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 140 456 438 759 759 230 41.0 5e-60 MVDGGTYMYTLFSEQNKDGLNGGNVWYLGAMTEEPGGGENPGGGENPGGGENPGGGENPG GGENPGGGENPGGGENPGGGENPGGGETPGGGENPGGGENPGGGENPGGGENPGGGETPG GGENPGGGENPGGGENPDGGDNGNTGGSGGKKPMTTPATDAILAMSNAGLNVIHSELEGL RMYRANLDKTGPESNVWGHYLGSKNHTDTSNGAAYQLNQNGIEIGADARTDFARGSLVTG AFMSYSDNAVKHARGGKSKIDSYGIGLYATWFDASGFYADGVVKGNRLNNKLRAVMTNGR TGGDWTQYGLSTAVEGGYQFDVRDDLSLTPYARLAYVQMSSEDVKLSNGMKGNTGTPRSV TGEAGAKLTGKFSLGAAEFKPYLSAAIVQEYADSNEVTINARNRFDNNVKGTSGKYGLGA SVSVGKDVTLYGEANYRQGSHTETPVQGVAGIRIGF Prediction of potential genes in microbial genomes Time: Wed May 18 15:19:54 2011 Seq name: gi|316918777|gb|ADCU01000014.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.14, whole genome shotgun sequence Length of sequence - 138143 bp Number of predicted genes - 115, with homology - 111 Number of transcription units - 63, operones - 27 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 2248 1292 ## COG3468 Type V secretory pathway, adhesin AidA 2 1 Op 2 . - CDS 2260 - 3429 447 ## ROD_p1111 putative adhesin glycosyltransferase - Prom 3497 - 3556 3.7 3 2 Tu 1 . - CDS 3631 - 4464 269 ## COG2200 FOG: EAL domain - Prom 4635 - 4694 3.8 + Prom 4607 - 4666 4.7 4 3 Op 1 . + CDS 4802 - 5608 284 ## ETAE_3041 hypothetical protein 5 3 Op 2 . + CDS 5589 - 6086 94 ## + Term 6102 - 6144 1.4 + Prom 6820 - 6879 1.6 6 4 Tu 1 . + CDS 7038 - 7310 98 ## COG3677 Transposase and inactivated derivatives + Term 7317 - 7354 1.1 7 5 Tu 1 . - CDS 7714 - 7905 75 ## - Prom 8037 - 8096 3.7 - TRNA 7752 - 7827 91.5 # Thr CGT 0 0 + Prom 8003 - 8062 3.7 8 6 Tu 1 . + CDS 8091 - 9122 1020 ## COG2130 Putative NADP-dependent oxidoreductases + Term 9131 - 9159 1.3 - Term 9119 - 9147 1.3 9 7 Op 1 22/0.000 - CDS 9168 - 10421 1253 ## COG0014 Gamma-glutamyl phosphate reductase 10 7 Op 2 . - CDS 10442 - 11548 1096 ## COG0263 Glutamate 5-kinase - Prom 11589 - 11648 3.1 11 8 Op 1 . - CDS 11663 - 12064 473 ## SDY_0477 DNA-binding transcriptional regulator Crl 12 8 Op 2 6/0.167 - CDS 12125 - 13372 749 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 13451 - 13510 3.2 - Term 13472 - 13512 3.7 13 9 Tu 1 . - CDS 13543 - 14019 576 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 14062 - 14121 4.0 + Prom 14126 - 14185 3.2 14 10 Tu 1 . + CDS 14258 - 15718 1509 ## COG2195 Di- and tripeptidases + Term 15736 - 15778 10.5 - Term 15731 - 15759 2.3 15 11 Tu 1 . - CDS 15777 - 16838 975 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 16862 - 16921 6.3 16 12 Op 1 7/0.083 - CDS 17667 - 17894 212 ## COG2991 Uncharacterized protein conserved in bacteria 17 12 Op 2 7/0.083 - CDS 17896 - 18903 1069 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis - Prom 18932 - 18991 3.8 - Term 19040 - 19084 4.1 18 13 Op 1 7/0.083 - CDS 19131 - 20357 1138 ## COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF 19 13 Op 2 9/0.083 - CDS 20376 - 20972 721 ## COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE 20 13 Op 3 9/0.083 - CDS 20978 - 21607 753 ## COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD 21 13 Op 4 9/0.083 - CDS 21600 - 22418 800 ## COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC 22 13 Op 5 7/0.083 - CDS 22411 - 23649 1257 ## COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB 23 13 Op 6 . - CDS 23653 - 24996 1194 ## COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA + Prom 25266 - 25325 4.9 24 14 Tu 1 . + CDS 25472 - 26197 553 ## COG3034 Uncharacterized protein conserved in bacteria + Term 26269 - 26298 1.2 25 15 Tu 1 . - CDS 26168 - 26935 349 ## COG0121 Predicted glutamine amidotransferase - Term 27094 - 27144 2.2 26 16 Tu 1 . - CDS 27145 - 27723 611 ## COG0279 Phosphoheptose isomerase - Prom 27892 - 27951 6.8 + Prom 27895 - 27954 8.9 27 17 Tu 1 . + CDS 28044 - 30533 2303 ## COG1960 Acyl-CoA dehydrogenases - Term 30865 - 30910 4.7 28 18 Op 1 1/0.667 - CDS 30931 - 31269 452 ## COG0347 Nitrogen regulatory protein PII 29 18 Op 2 1/0.667 - CDS 31281 - 32903 1675 ## COG0171 NAD synthase - Prom 32958 - 33017 3.5 30 19 Op 1 . - CDS 33096 - 34436 1346 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 31 19 Op 2 . - CDS 34450 - 35271 651 ## Spro_3652 hypothetical protein 32 19 Op 3 3/0.458 - CDS 35275 - 36711 972 ## COG0642 Signal transduction histidine kinase - Prom 36867 - 36926 2.1 - Term 37907 - 37940 3.7 33 20 Tu 1 . - CDS 38137 - 42045 3696 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Prom 42165 - 42224 4.5 34 21 Tu 1 . + CDS 42343 - 43839 1220 ## COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein + Term 43865 - 43897 3.0 - Term 43776 - 43812 -0.6 35 22 Tu 1 . - CDS 43836 - 44348 412 ## COG0590 Cytosine/adenosine deaminases - Prom 44510 - 44569 4.9 + Prom 44401 - 44460 2.5 36 23 Tu 1 . + CDS 44551 - 44889 379 ## COG0607 Rhodanese-related sulfurtransferase + Term 45121 - 45164 -0.7 + Prom 45040 - 45099 7.7 37 24 Tu 1 . + CDS 45185 - 46336 1143 ## COG1454 Alcohol dehydrogenase, class IV - Term 46252 - 46294 0.0 38 25 Tu 1 . - CDS 46540 - 47439 612 ## COG0583 Transcriptional regulator - Prom 47516 - 47575 2.3 + Prom 47395 - 47454 2.6 39 26 Op 1 2/0.458 + CDS 47556 - 48425 752 ## COG1741 Pirin-related protein 40 26 Op 2 . + CDS 48497 - 49180 761 ## COG1335 Amidases related to nicotinamidase + Term 49190 - 49223 5.4 - Term 49107 - 49153 3.9 41 27 Tu 1 . - CDS 49220 - 49870 346 ## COG0560 Phosphoserine phosphatase - Prom 49911 - 49970 2.1 + Prom 49998 - 50057 6.5 42 28 Tu 1 . + CDS 50175 - 50396 177 ## COG1145 Ferredoxin + Term 50398 - 50435 4.7 43 29 Op 1 4/0.375 - CDS 50437 - 51117 680 ## COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance 44 29 Op 2 5/0.208 - CDS 51180 - 51596 440 ## COG1186 Protein chain release factor B 45 29 Op 3 . - CDS 51598 - 52146 539 ## COG4681 Uncharacterized protein conserved in bacteria - Prom 52166 - 52225 5.3 + Prom 52112 - 52171 7.4 46 30 Op 1 . + CDS 52373 - 52573 279 ## YPTB2982 hypothetical protein 47 30 Op 2 . + CDS 52560 - 52820 235 ## COG4568 Transcriptional antiterminator + Term 52847 - 52901 17.6 - Term 52841 - 52884 12.6 48 31 Tu 1 . - CDS 52903 - 53220 433 ## COG2863 Cytochrome c553 - Prom 53354 - 53413 3.0 49 32 Op 1 . - CDS 53565 - 54863 888 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control - Term 54914 - 54948 -0.5 50 32 Op 2 4/0.375 - CDS 54963 - 56447 1133 ## COG3104 Dipeptide/tripeptide permease - Term 56468 - 56510 10.7 51 33 Op 1 10/0.042 - CDS 56521 - 58662 2373 ## COG1982 Arginine/lysine/ornithine decarboxylases 52 33 Op 2 4/0.375 - CDS 58813 - 60135 1162 ## COG0531 Amino acid transporters - Prom 60289 - 60348 7.5 - Term 60505 - 60541 1.5 53 34 Tu 1 . - CDS 60562 - 62172 1091 ## COG3710 DNA-binding winged-HTH domains - Prom 62264 - 62323 4.0 - Term 62816 - 62852 6.4 54 35 Op 1 7/0.083 - CDS 62878 - 63837 1188 ## COG0825 Acetyl-CoA carboxylase alpha subunit 55 35 Op 2 6/0.167 - CDS 63850 - 67332 2993 ## COG0587 DNA polymerase III, alpha subunit - Prom 67453 - 67512 3.4 56 36 Op 1 11/0.000 - CDS 67514 - 68137 543 ## COG0164 Ribonuclease HII 57 36 Op 2 11/0.000 - CDS 68150 - 69340 964 ## COG0763 Lipid A disaccharide synthetase 58 36 Op 3 25/0.000 - CDS 69344 - 70132 797 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 59 36 Op 4 18/0.000 - CDS 70136 - 70591 449 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases - Prom 70809 - 70868 2.8 - Term 70818 - 70854 1.6 60 36 Op 5 15/0.000 - CDS 70873 - 71895 736 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 61 36 Op 6 17/0.000 - CDS 71899 - 72420 549 ## COG2825 Outer membrane protein - Prom 72473 - 72532 3.5 62 36 Op 7 18/0.000 - CDS 72571 - 74958 2275 ## COG4775 Outer membrane protein/protective antigen OMA87 63 36 Op 8 12/0.000 - CDS 74996 - 76351 1020 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 64 36 Op 9 32/0.000 - CDS 76377 - 77120 752 ## COG0575 CDP-diglyceride synthetase - Prom 77155 - 77214 3.2 65 36 Op 10 7/0.083 - CDS 77238 - 77999 568 ## COG0020 Undecaprenyl pyrophosphate synthase - Prom 78215 - 78274 4.8 - Term 78150 - 78208 9.3 66 37 Tu 1 8/0.083 - CDS 78276 - 79475 838 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase - Prom 79509 - 79568 1.7 - Term 79585 - 79629 7.3 67 38 Op 1 33/0.000 - CDS 79644 - 80201 639 ## COG0233 Ribosome recycling factor - Prom 80235 - 80294 3.6 - Term 80281 - 80325 0.2 68 38 Op 2 . - CDS 80392 - 80520 157 ## COG0528 Uridylate kinase 69 38 Op 3 24/0.000 - CDS 80489 - 81118 652 ## COG0528 Uridylate kinase - Prom 81189 - 81248 2.1 - Term 81274 - 81317 9.5 70 39 Op 1 38/0.000 - CDS 81325 - 82176 1013 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Prom 82269 - 82328 4.5 - Term 82294 - 82346 2.1 71 39 Op 2 . - CDS 82424 - 83149 1202 ## PROTEIN SUPPORTED gi|16759206|ref|NP_454823.1| 30S ribosomal protein S2 - Prom 83286 - 83345 2.2 + Prom 83417 - 83476 3.6 72 40 Tu 1 . + CDS 83524 - 84324 830 ## COG0024 Methionine aminopeptidase + Prom 84612 - 84671 9.4 73 41 Tu 1 . + CDS 84773 - 85474 467 ## NT01EI_1438 hypothetical protein + Prom 85737 - 85796 2.8 74 42 Tu 1 . + CDS 85825 - 88494 2153 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase + Prom 88497 - 88556 3.8 75 43 Tu 1 . + CDS 88655 - 89479 868 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase + Term 89489 - 89525 5.6 + Prom 89511 - 89570 4.4 76 44 Tu 1 . + CDS 89599 - 90009 487 ## Spro_3794 hypothetical protein + Term 90109 - 90159 2.4 - Term 90400 - 90455 13.7 77 45 Op 1 5/0.208 - CDS 90541 - 90990 508 ## COG0716 Flavodoxins 78 45 Op 2 7/0.083 - CDS 91031 - 91801 197 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 79 45 Op 3 . - CDS 91801 - 92133 338 ## COG3098 Uncharacterized protein conserved in bacteria - Prom 92172 - 92231 3.4 - Term 92781 - 92831 13.6 80 46 Tu 1 . - CDS 92851 - 93402 399 ## ETAE_0725 hypothetical protein - Prom 93434 - 93493 4.3 + Prom 93373 - 93432 3.3 81 47 Tu 1 . + CDS 93475 - 94320 706 ## COG0780 Enzyme related to GTP cyclohydrolase I + Prom 94458 - 94517 3.5 82 48 Op 1 2/0.458 + CDS 94664 - 95998 1174 ## COG1611 Predicted Rossmann fold nucleotide-binding protein + Term 96014 - 96047 4.0 83 48 Op 2 . + CDS 96060 - 96812 504 ## COG0258 5'-3' exonuclease (including N-terminal domain of PolI) + Term 96861 - 96889 1.0 - Term 96848 - 96876 1.0 84 49 Op 1 5/0.208 - CDS 96910 - 98055 827 ## COG2933 Predicted SAM-dependent methyltransferase 85 49 Op 2 6/0.167 - CDS 98048 - 98443 259 ## COG2363 Uncharacterized small membrane protein 86 49 Op 3 . - CDS 98501 - 99418 704 ## COG0583 Transcriptional regulator - Prom 99486 - 99545 5.2 - Term 99737 - 99766 0.3 87 50 Tu 1 . - CDS 99804 - 100025 320 ## ECIAI1_2919 hypothetical protein - Prom 100095 - 100154 3.4 88 51 Op 1 7/0.083 + CDS 100216 - 101448 905 ## COG0520 Selenocysteine lyase 89 51 Op 2 . + CDS 101445 - 101879 468 ## COG2166 SufE protein probably involved in Fe-S center assembly - Term 101729 - 101774 2.1 90 52 Op 1 8/0.083 - CDS 101874 - 102686 685 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 - Term 102697 - 102753 11.9 91 52 Op 2 3/0.458 - CDS 102772 - 103887 996 ## COG2821 Membrane-bound lytic murein transglycosylase - Prom 103916 - 103975 5.2 + TRNA 104235 - 104311 83.3 # Met CAT 0 0 + TRNA 104383 - 104459 81.8 # Met CAT 0 0 92 53 Tu 1 . - CDS 104601 - 105851 982 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 106034 - 106093 7.3 + Prom 105999 - 106058 6.9 93 54 Tu 1 . + CDS 106085 - 107413 966 ## COG0548 Acetylglutamate kinase 94 55 Op 1 13/0.000 - CDS 107436 - 109292 1222 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 95 55 Op 2 5/0.208 - CDS 109289 - 112864 2615 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 96 55 Op 3 5/0.208 - CDS 112864 - 115770 2457 ## COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like - Prom 115802 - 115861 1.6 97 56 Op 1 . - CDS 115915 - 119316 2230 ## COG1330 Exonuclease V gamma subunit 98 56 Op 2 . - CDS 119385 - 119756 197 ## 99 56 Op 3 . - CDS 119750 - 120157 133 ## 100 56 Op 4 12/0.000 - CDS 120196 - 120777 184 ## COG4795 Type II secretory pathway, component PulJ 101 56 Op 5 4/0.375 - CDS 120768 - 121226 354 ## COG2165 Type II secretory pathway, pseudopilin PulG - Prom 121377 - 121436 4.9 - Term 121418 - 121449 2.4 102 57 Op 1 11/0.000 - CDS 121473 - 122267 756 ## COG0207 Thymidylate synthase 103 57 Op 2 . - CDS 122335 - 123204 867 ## COG0682 Prolipoprotein diacylglyceryltransferase - Prom 123249 - 123308 2.5 104 58 Tu 1 . - CDS 123540 - 123932 418 ## Spro_3438 hypothetical protein - Prom 123956 - 124015 5.3 105 59 Op 1 . - CDS 124152 - 124478 261 ## ETAE_0700 hypothetical protein 106 59 Op 2 7/0.083 - CDS 124537 - 125178 467 ## COG0529 Adenylylsulfate kinase and related kinases 107 59 Op 3 18/0.000 - CDS 125196 - 126635 1486 ## COG2895 GTPases - Sulfate adenylate transferase subunit 1 108 59 Op 4 . - CDS 126673 - 127581 840 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes + Prom 127861 - 127920 3.4 109 60 Tu 1 . + CDS 127994 - 129034 789 ## COG2234 Predicted aminopeptidases + Prom 129191 - 129250 2.7 110 61 Tu 1 . + CDS 129298 - 130071 767 ## COG3416 Uncharacterized protein conserved in bacteria + Term 130094 - 130126 4.0 - Term 130080 - 130114 1.9 111 62 Op 1 33/0.000 - CDS 130139 - 132157 1781 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 112 62 Op 2 14/0.000 - CDS 132154 - 133071 746 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 113 62 Op 3 7/0.083 - CDS 133098 - 133895 212 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Term 133925 - 133959 5.0 114 62 Op 4 . - CDS 133973 - 136024 535 ## PROTEIN SUPPORTED gi|145633184|ref|ZP_01788915.1| putative hydroxamate-type ferrisiderophore receptor - Prom 136206 - 136265 8.9 + Prom 136721 - 136780 6.6 115 63 Tu 1 . + CDS 136851 - 137990 1145 ## COG3203 Outer membrane protein (porin) + Term 138013 - 138060 4.0 Predicted protein(s) >gi|316918777|gb|ADCU01000014.1| GENE 1 1 - 2248 1292 749 aa, chain - ## HITS:1 COG:flu KEGG:ns NR:ns ## COG: flu COG3468 # Protein_GI_number: 16129941 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 1 556 57 580 1091 148 33.0 4e-35 MNKIYTTVWCESRQQWVVTSELASGSGRPKLAPKKSALALLLGAMLLPSAPVMAVDYVDV TLTGEQTISSGDTATSTTINGGSQYIYNGGSATETVINDGGMQDVYVGGLATETTINNGG DQYILGGTATDTSINSGGKQEVINGGTTTATTISGGSQNVYNRGTATDTTINGGSQSVFS GGSATATIINSGGWQNVSSGGTATNTTINSGGNQYINGGTAIDTTINRGFQWVSHDSTAT GTTINGGWQDVSNRGTATDTIINSGEQYVHIGGTANETTINGSGEQAIYGGTATDTTINS GGAQAIFNGGSATDTTINSGGGQYISVSGGGTATNTTINGGEQRVSSGGTATETTINSGG MQYVSSGGTATETTINDGGQQVVFNGGTATDTTINRGSQSVFGTVTGGTIFNSGIQLISS GGIVTDITLHSTGIQVVFDGGTATDTIINSRGIQSIFGGTATDTTINSGGWQDVYSGGAA TVTTINNGALQQVRSGGTTIDTTINGGQSWLMTGALADGETQINAGGELLMDAGSVATDV HITGGTLSVTDLTSTTASYTPAQVDKLTMNGGNVNFLRNSDGEFAKLTITELNGTGNFLF NTSLADRKANFVTIEQGSGQFGIAVNDSGKEISDHTDLTVNLIHEKGGDIDFEMVTDNGR STNMVDGGTYMYTLFSEQNKDGLNGGNVWYLGAMTEEPGGGENPGGGENPGGGENPGGGE NPGGGENPGGGENPGGGDDPWRWRDPWRR >gi|316918777|gb|ADCU01000014.1| GENE 2 2260 - 3429 447 389 aa, chain - ## HITS:1 COG:no KEGG:ROD_p1111 NR:ns ## KEGG: ROD_p1111 # Name: not_defined # Def: putative adhesin glycosyltransferase # Organism: C.rodentium # Pathway: not_defined # 5 387 9 391 409 627 74.0 1e-178 MSGNFATPPEFPTCAGPEGILFDFNYGARVYLPEGKWHVILLDDDSGNVLFSCDSDGGWV ASTKKYYVRFRIQVFHQGETHPVLDETLDMKDKPVVIFFPTGTLGDMLGWFHYAERFRQL HRCHLECVMGQEIIDLLSAQYPEITFSTKASLRTVNPYASWYVGLFFKGDTLHQPVDFRK VGFHRNAGYILGVDPRECPPRLKLDAERKIAEPYVCIAAQSTNQAKYWNNGHGWAEVVVH LKSLGYRVLCIDRQARHGQGFVWNHIPYGAEDFTGDIPLQERVDLLRHASFFIGLGSGLS WLAWAAGIPVVLISGFSLPNSEFHTPWRVFSSHGCNGCWDDTSVDFDHQDFLWCPHHRDT PRQYECTRLITGRQVTGVVDRLHAGLVDN >gi|316918777|gb|ADCU01000014.1| GENE 3 3631 - 4464 269 277 aa, chain - ## HITS:1 COG:ycgG_2 KEGG:ns NR:ns ## COG: ycgG_2 COG2200 # Protein_GI_number: 16129131 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 10 265 3 260 271 125 30.0 1e-28 MISTRMLRKVERFFSQAGTLIKESILSAELTGAAFVPYVQPVYRGDKIAGGEVLLRVRKD GVLHSPEKYLSAMESCEVINEVTCSLLSDVKTFFEGYEGPLPDDFYLSFNICARQLNSPE VIEAVTDFNKTFEGRIAVLLEIVERGTMYFDDFALEAMQHLTDAGVRFAIDDFGNGSSCL KYIEHTGFSTIKMDKCLTVASNGSLIYSAVIDSIVTLSERLQIQLVAEGVENKEQLSLLK DKGVNIFQGYLFSKPVSIREFCKHIYHLHSCKQTGHD >gi|316918777|gb|ADCU01000014.1| GENE 4 4802 - 5608 284 268 aa, chain + ## HITS:1 COG:no KEGG:ETAE_3041 NR:ns ## KEGG: ETAE_3041 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 3 263 11 249 251 85 29.0 2e-15 MDYLIGSLVRYRSDDGAIWPVSDEDSVIILTATMNRLLAYLLERQGQVINRDELLDNVWD LHGLRSSNHTLNKYISELRKHFVSTGIHAECITTVPRIGFMFNQDIDVVVMTDTSPVYES TALINSTGAGINRRFSAFSAKHRLSFNILLLALFVASAVIFIAGSQIPTTNTATLKDIQT YFLFNYQNCPVYTIHKNSASFLEKKKDVFITLARQNNLDCLNGTLFLYQASDAYIYGSKG RVFISRCTTKDKQYISCLNNYWNGYESN >gi|316918777|gb|ADCU01000014.1| GENE 5 5589 - 6086 94 165 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVMKAIKISRFCAAVSLLLVMASSIGFYMYMLKRQNGMDVDCNTIIRYNHLNPDFTATLN LVFRLDKQFSGQVVLSGYINSEGGPETVSRMIHFGYEVNRPGEISVSNMRYVKKSQDTAS DEIFRHGFFYVPEGTVRQLRINPLLNGWLIENLQSPFALCVNKDR >gi|316918777|gb|ADCU01000014.1| GENE 6 7038 - 7310 98 90 aa, chain + ## HITS:1 COG:YPO0981 KEGG:ns NR:ns ## COG: YPO0981 COG3677 # Protein_GI_number: 16121285 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 86 1 86 87 128 74.0 3e-30 MASVNVHCPRCQPAQVYRHGQNPKGHDRFRCRDCHRVFQLTYAYEAPKLGVKEQITEMAF NGSGVRDTARTLKIGINTVIRTLKNSRRSE >gi|316918777|gb|ADCU01000014.1| GENE 7 7714 - 7905 75 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPLTLLDNFTIVISALRVIPSKISPCADIAQLVEQRIRNAKVVGSTPIIGTIKSMGYSFF ICM >gi|316918777|gb|ADCU01000014.1| GENE 8 8091 - 9122 1020 343 aa, chain + ## HITS:1 COG:PA2197 KEGG:ns NR:ns ## COG: PA2197 COG2130 # Protein_GI_number: 15597393 # Func_class: R General function prediction only # Function: Putative NADP-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 1 342 1 342 345 461 64.0 1e-130 MSISSRINRRYVLAQRPQGMPSDQDFRLEKVAQPEPEQGQVLLRTLYLSLDPYVRGRLDD VPSYSPPLAIGDVICGGTVCRVEQSLHPDYQAGDLVLAYTGWQDYALSDGEGLQKLDANM AHPSYALGLLGMPGFTGYMGLTDIGNPQVGETVVVAAATGAVGSVVGQVAKLRGCRAVGI AGGVEKCRYAVEKLGFDVCIDHRAADFAHQLKQACDKGIDVYYENVGGAVFDAVLPLLNT KARIPVCGMISQYNGHHSDHQQDRLPLLMSTILKKRMRVEGFIISQDYGDRYPEFYAQMS TWLAQGKIVFKEDIVDGLENSITAFQGLLSGKNFGKLIIKVAE >gi|316918777|gb|ADCU01000014.1| GENE 9 9168 - 10421 1253 417 aa, chain - ## HITS:1 COG:YPO3221 KEGG:ns NR:ns ## COG: YPO3221 COG0014 # Protein_GI_number: 16123380 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Yersinia pestis # 1 417 3 419 419 617 75.0 1e-176 MLEEMGKAAKRASYHLAVLSSAQKNQALALIADYLEQDSESILQANQMDVQQARENGLSE AMLDRLQLTQSRLEGIANDVRQVCNLTDPVGKVIDGSVLDSGLNLERRRVPLGVVGVIYE ARPNVTVDTAALCLKTGNAVILRGGKETHRTNQATVKVIQRALEKAGLPSDAVQAIESPD RALVTELLKLDRYVDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDQGMDVEQALK IIVNAKTQRPSTCNTVETLLVNQHDASQFLPALSQRMQDVGVSLHACPRALPLLSQGPAP VKPVQEIELNDEWLSLDLNVVVVEGLDGAIEHIREHGTQHSDAILTRNMHSADRFVREVD SSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGYGDDLVRS >gi|316918777|gb|ADCU01000014.1| GENE 10 10442 - 11548 1096 368 aa, chain - ## HITS:1 COG:YPO3222 KEGG:ns NR:ns ## COG: YPO3222 COG0263 # Protein_GI_number: 16123381 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Yersinia pestis # 1 367 1 367 367 624 91.0 1e-178 MSGSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQQHAAGHRIVIVTSGAIAAGREHL GYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDT LHALMDNRIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQAGLFTADPR HNPTAELIREVTSIDDALRGIAGDSVSGLGTGGMTTKLQAADVACRAGIDVIIAAGSKPG VVGDVIEGVSVGTRFHALETPLENRKRWIFGAPPAGEITVDDGAVSAILERGSSLLPKGI REVSGDFSRGEVIRIRNLEGRDLAHGVSRYNSDALRMIAGHHSQQISGVLGYEYGPVAVH RDDMIVSI >gi|316918777|gb|ADCU01000014.1| GENE 11 11663 - 12064 473 133 aa, chain - ## HITS:1 COG:no KEGG:SDY_0477 NR:ns ## KEGG: SDY_0477 # Name: crl # Def: DNA-binding transcriptional regulator Crl # Organism: S.dysenteriae # Pathway: not_defined # 1 133 1 133 133 191 66.0 6e-48 MTLPGGYSKSRLIKKFTALGPYIRSGQCQEDHFFFDCLAVCVNVKPNPEKREFWGWWLDL AAEETHFTYRYSFGLFDKQGVWQEQAIKDPEVTEKLEQTSLNFHNRLQELLTTLEIKIQP ADDFSEELVRLRA >gi|316918777|gb|ADCU01000014.1| GENE 12 12125 - 13372 749 415 aa, chain - ## HITS:1 COG:YPO3224 KEGG:ns NR:ns ## COG: YPO3224 COG1073 # Protein_GI_number: 16123383 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Yersinia pestis # 1 413 1 413 415 594 67.0 1e-169 MSQANLSETLFKPRFKHRETSTLVKRHGHVPQASIASALEGTSQANWYRTINRLMWVWRG VSPIEIEHVLSRIAASTAERSDEKLLDTVVGYRSGNWIYEWSHQAMGWQQRAQEEKDPQV AGDYWLQAANLYSIAAYPHLKGDDLAEQAEVLANRAYEESAKLLPYSLKEIEFAIDGGRK ITGFLHMPDNSNGPFPTVLICGGLDMMQSDSHRLFRDYLAPAGMAMLTIDMPSVGMSSHY CLTQDSSRLHQQVLNALPNVPWVDHTRVSLFGFRFGANVAVRLAYLEPRRLRAVATLGPV VHNLLCDPRIQERVPDMYIDVLASRLGMESISDAALRTELSCYSLKTQGLLGRRCQTPML AGYWDRDPFCPKSEAKLIVDSSLNGKLLMVSSSPLYEGFHKALHQVCDWISEQSY >gi|316918777|gb|ADCU01000014.1| GENE 13 13543 - 14019 576 158 aa, chain - ## HITS:1 COG:STM0317 KEGG:ns NR:ns ## COG: STM0317 COG0503 # Protein_GI_number: 16763699 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Salmonella typhimurium LT2 # 7 158 1 152 152 295 94.0 2e-80 MAGTLLMSEKYVVTWDVLQMHARKLAARLMPSEQWTGIIAVSRGGLVPAALLARELGIRH VDTVCISSYDHDNQRELKVVKRAEGDGEGFIVIDDLVDTGGTAQAIREMYPKAHFVTIFA KPAGRPLVDDYVIDIPQNTWIEQPWDMGVCFVEPISGR >gi|316918777|gb|ADCU01000014.1| GENE 14 14258 - 15718 1509 486 aa, chain + ## HITS:1 COG:YPO3230 KEGG:ns NR:ns ## COG: YPO3230 COG2195 # Protein_GI_number: 16123389 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Yersinia pestis # 1 485 1 485 486 788 78.0 0 MSELSQLSPQPLWQIFADICSIPHPSYHEEALAAHIVAWAKEKGIHVERDEVGNVLLRKP ASRGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGDWVKARGTTLGADNGIGM ASALAVLADDSVSHGPIEVLLTMTEEAGMEGAFGLKAGWLQADILINTDSEEEGEIYMGC AGGIDFITTLPLQREAVPASHDIVKLTIKGLKGGHSGGDIHLGLGNANKLMARFLAGHAT ELGLRVLDLNGGTLRNAIPREATAVLAVPSANLAKLKTLAETFLSILKIELAAVEKNLNI QVESAQSDSQALTSDSQQRFIALLNGTPNGVVRMSDEVKGVVETSLNVGVVTTDAKEAQI ICLIRSLIDSGKDSVVSQLTSLGELAGAHVEAKGSYPGWKPDANSPVMHLVRETYQKLFD TTPNIMVIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIASVGQYWQLLTALLK AIPEKA >gi|316918777|gb|ADCU01000014.1| GENE 15 15777 - 16838 975 353 aa, chain - ## HITS:1 COG:dinP KEGG:ns NR:ns ## COG: dinP COG0389 # Protein_GI_number: 16128217 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli K12 # 1 351 1 351 351 550 75.0 1e-156 MRKIIHVDMDCFYAAVEMRDFPELRDVPLAIGGSRDRRGVISTANYAARKFGVRSAMPTG QALKLCPHLTLRPGRMDVYKDVSNHIRSIFQRYTSLIEPLSLDEAYLDVTDCSLCHGSAT LIAEQIRKDIAAELDLTASAGIAPIKFLAKIASDLNKPNGQYVITPAQVDEFILQLPLKK IPGVGKVTAAKLSELGLNTCADVRRYDLAELLRRFGKFGRVLWERCHGQDEREVMPDRLR KSVGVERTLSEDIHRWDECEVLLEKLYEELERRLRKVQPDLHIARQGVKLKFHDFQQTTQ EHVWPVLDKQDLFKVAQQAWDERRTGRGVRLVGLHVTLLDPQLEKQLSLDIDG >gi|316918777|gb|ADCU01000014.1| GENE 16 17667 - 17894 212 75 aa, chain - ## HITS:1 COG:YPO3233 KEGG:ns NR:ns ## COG: YPO3233 COG2991 # Protein_GI_number: 16123392 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 75 1 75 75 108 68.0 2e-24 MATVFIATFVMFLVVIAAMSIGYIIKRKSIHGSCGGIASLGLEKVCDCPEPCDARKKRMA REEARREMLEKHRIL >gi|316918777|gb|ADCU01000014.1| GENE 17 17896 - 18903 1069 335 aa, chain - ## HITS:1 COG:YPO3234 KEGG:ns NR:ns ## COG: YPO3234 COG1477 # Protein_GI_number: 16123393 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Yersinia pestis # 7 328 15 336 340 503 74.0 1e-142 MVFCGLAFLLTGCGPEQVNIEGKTMGTYYSIKYVSESGVPAPEEIKAELDKRLELVNDQM STYRSNSELSRFNQSTDVNKPFPVSAATAKVVSEAIRINKMTDGALDITVGPLVNLWGFG PEGRPDRVPSDEEINQRRSWIGIEHLAVQGDALVKDIPQLYLDLSSIAKGYGVDVAAEYL ASLHITNYMVDIGGEVRTRGLNGDGAPWRIAIEKPQAGLQQSAQVIIQPGEMAIATSGDY RNYFEKNGQRFSHEIDPKTGRPVTHHLVSITVLAPSCMTADGLSTGLDVMGPERGMALAN LLGIPVFMIVKTENGFEDRYSEAFKPYLVQSTKGK >gi|316918777|gb|ADCU01000014.1| GENE 18 19131 - 20357 1138 408 aa, chain - ## HITS:1 COG:YPO3235 KEGG:ns NR:ns ## COG: YPO3235 COG2871 # Protein_GI_number: 16123394 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF # Organism: Yersinia pestis # 3 408 2 407 407 711 87.0 0 MQEIILGVAMFTLIVVALTVLILFAKSKLVNTGDIHVEVNHDPEKSFDAPAGDKLLNMLS SQGIFVSSACGGGGSCGQCRVHVKEGGGDILPTELAHISKREAKEGCRLACQVSVKQDLK IELPEEIFGVKKWECEVISNDNVATFIKELKLRIPEGEAVPFRAGGYIQIECEPHHVRYA DFDVPEEYRGDWDKFNLFRFESKVTEPTIRAYSMANYPDEKGLIMLNVRIATPPPGVPDA PPGIMSSYIWSLKPGDKVTISGPFGEFFAKETDAEMIFIGGGAGMAPMRSHIFDQLKRLH TKRKMSFWYGARSTREMFYVEDFNKLAAENPNFTWNIALSDPQPEDNWTGYTGFIHNVLL ENYLRAHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIMLDDFGG >gi|316918777|gb|ADCU01000014.1| GENE 19 20376 - 20972 721 198 aa, chain - ## HITS:1 COG:YPO3236 KEGG:ns NR:ns ## COG: YPO3236 COG2209 # Protein_GI_number: 16123395 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE # Organism: Yersinia pestis # 1 198 1 198 198 297 87.0 9e-81 MEHYISLFVRSVFIENMALAFFLGMCTFLAVSKKVTTAFGLGVAVTVVLGISVPANNLVY NYVLRDSALVEGVDLSFLSFITFIGVIAALVQILEMILDRFFPSLYNALGIFLPLITVNC AIFGGVSFMVQRDYNFAESVVYGFGSGIGWLLAIVAMAGLREKMKYANVPAGLRGLGITF VTTGLMALGFMSFSGVHL >gi|316918777|gb|ADCU01000014.1| GENE 20 20978 - 21607 753 209 aa, chain - ## HITS:1 COG:YPO3237 KEGG:ns NR:ns ## COG: YPO3237 COG1347 # Protein_GI_number: 16123396 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD # Organism: Yersinia pestis # 1 209 1 209 209 343 90.0 9e-95 MADTKEIKKVLLGPLLDNNPIALQILGVCSALAVTTKLETAFVMTIAVTLVTAFSNFFIS LIRHQIPNSVRIIVQMAIIASLVIVVDQILRAYAYEISKQLSVFVGLIITNCIVMGRAEA YAMKSPPIESFMDGIGNGLGYGVILILVGFLRELFGSGKLFGITVLESVQNGGWYQPNGL FLLAPSAFFIIGMLIWALRTLKPEQIEKE >gi|316918777|gb|ADCU01000014.1| GENE 21 21600 - 22418 800 272 aa, chain - ## HITS:1 COG:YPO3238 KEGG:ns NR:ns ## COG: YPO3238 COG2869 # Protein_GI_number: 16123397 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC # Organism: Yersinia pestis # 14 272 9 266 266 351 69.0 1e-96 MAKDSVNKTSAGKNDSIGRTLLVVVILCLVCSVIVAGSAVGLKPMQEEQKQLDKQRNILA VAGLMHGDKLDAEQVKTLFGERIEPRLLDLKSGEFMAGEPNSFDMSKALKDPNASTALTP EQDLAGIKHRSNIVEVYLVKDAQGKIGQVVLPIYGTGLWSVMYAFVAIDTDGNTVKGLTF YEHGETPGLGGEIENPSWREKWVGKQLFDDGGKPAIRIVKGGANPLDPHGVDGLSGATLT ANGVQHTFDFWMGDNGYGPFLKRVREGALNHG >gi|316918777|gb|ADCU01000014.1| GENE 22 22411 - 23649 1257 412 aa, chain - ## HITS:1 COG:YPO3239 KEGG:ns NR:ns ## COG: YPO3239 COG1805 # Protein_GI_number: 16123398 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB # Organism: Yersinia pestis # 1 412 1 412 413 667 84.0 0 MGLKSFIENMEHHFEPGGKLQKYYPLYEAAATLMYTPGKVTHGASHVRDAIDLKRMMILV WLAVFPTMFWGMYNVGHETIGALNHLYQGEKLAQVIASDWHYWLAEMLGASLQANAGWAS MMTLGAVYFLPIYAVVFLVGGFWEVLFSIIRKHEINEGFFVTSILFALIVPPTLPLWQAA LGISFGVVIAKEIFGGTGRNFLNPALAGRAFLFFAYPAQISGDLVWNAADGYSGATPLSQ WSAGGQSGLLNTITGQHVTWMDAFIGNIPGSIGEVSTLMILIGGLIIMFGRVASWRIVAG VMLGMIAMSALFNFIGSDTNPMFAMPWYWHLVLGGFAFGMIFMATDPVSASFTNKGKWWY GGLIGVMCVLVRVVNPAYPEGMMLAILFANLFAPLFDYMVVRANIKRRKARG >gi|316918777|gb|ADCU01000014.1| GENE 23 23653 - 24996 1194 447 aa, chain - ## HITS:1 COG:YPO3240 KEGG:ns NR:ns ## COG: YPO3240 COG1726 # Protein_GI_number: 16123399 # Func_class: C Energy production and conversion # Function: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA # Organism: Yersinia pestis # 1 447 1 447 447 695 74.0 0 MIKIKKGLNLPIEGAPAPVIEQGPAIGRVAILGGDYVGMRPSMVVQEGDQVKKGQVLFED KKNPGVLFTAPAAGQVIAINRGEKRVLESVVIAVDGDEQVTFTHYDAAELADLTRAQVES NLVASGLWTALRTRPFSHAPKLGSDTAAIFVSVMDTQPLAADPLLILRENMADFEHGLTV LSRLTEGKVYVCQQAGAGLQNKTAPNVTYNEFSGPHPAGLVGTHIHFLEPVSLTKTVWHI GYQDVIAVGKLFTTGELYTDRVIALGGPQVEKPVLLRTRLGASTDEMTVGRLKQGDNRII SGSVLSGTQAIGTKAFLGRFHNQISVVKEGREKELLGWMMPGANKFSITRTTLGHFFKRK LFAFSTDMNGGERAMVPIGNYERVMPLDILPTMLLRDLLSGDCESAQALGCLELDEEDLA LCTFVCPGKYEYGPVLRDVLTTIEQEG >gi|316918777|gb|ADCU01000014.1| GENE 24 25472 - 26197 553 241 aa, chain + ## HITS:1 COG:YPO3241 KEGG:ns NR:ns ## COG: YPO3241 COG3034 # Protein_GI_number: 16123400 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 240 1 239 246 305 63.0 4e-83 MGKIIALLAVFFVLPLTSCSSSASEQAQNTPLVKQQLLGSPVYIQIFKEERKLELFAKVQ DKYQLVQSFNICKFSGGLGPKRTEGDFKSPEGFYQVDARHLKPNSKFYQAINIGYPNAYD QAHGYSGKYLMIHGDCVSIGCYAMTNEGISQIYTYVQSAFRNGQTLVNINIYPFRMTEQN MQRHRNSDYLPFWKQLQPGYAYFNEHHQPPMVNVVNGQYVVNRPSALDGQSPSQLAFTQT K >gi|316918777|gb|ADCU01000014.1| GENE 25 26168 - 26935 349 255 aa, chain - ## HITS:1 COG:YPO3242 KEGG:ns NR:ns ## COG: YPO3242 COG0121 # Protein_GI_number: 16123401 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Yersinia pestis # 1 253 1 253 257 487 87.0 1e-137 MCELLGMSANVPTDICFSFTGLVQRGGRTGPHKDGWGITFYEGNGCRTFKDPHPSFNSPI ARLVQEYPIKSCAVISHIRQANRGTVALENTHPFTRELWGRNWTFAHNGQLTGYKNLETG YFRPVGQTDSEYAFCWLLNKMATRYPRTPGNWPAVFRFIAQCADELRAKGVFNMLLSDGR FVMAYCSTNLYWITRRAPFGKATLLDEDVEIDFQSQTTPNDVVTVIATQPLTSNENWSRI GSGEYALFCLGERQL >gi|316918777|gb|ADCU01000014.1| GENE 26 27145 - 27723 611 192 aa, chain - ## HITS:1 COG:YPO3243 KEGG:ns NR:ns ## COG: YPO3243 COG0279 # Protein_GI_number: 16123402 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Yersinia pestis # 1 192 1 192 193 352 93.0 3e-97 MYHDLIRSELNEAATTLQNFIGDDANIDAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM HFAEELTGRYRENRPGYAAIAISDPSHLSCVSNDFGYEYVFSRYVEAVGREGDVLLGIST SGNSGNIIKAIEAARAKGMKVITLTGKDGGKMAGSADVEIRVPHFGYADRIQEIHIKAIH ILIQLIEKEMVK >gi|316918777|gb|ADCU01000014.1| GENE 27 28044 - 30533 2303 829 aa, chain + ## HITS:1 COG:yafH KEGG:ns NR:ns ## COG: yafH COG1960 # Protein_GI_number: 16128207 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli K12 # 1 829 14 826 826 1398 81.0 0 MVLSLVVFLIAIGMLFYHQVNLYLSSAILLAYTAAMAAIGLWSFWALVPVAVVLLPLVLV SVRRSLISAPALKAFQKVMPPMSRTEKEAIDAGTTWWEGDIFRGTPDWKKLHDYPQPKLT EEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKQYGGLEFSAY AQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTEAQKDHYLPRLARGEEIPCFALT SPEAGSDAGAIPDVGIVCMGEWQGKQTLGMRLTWNKRYITLAPIATVLGLAFKLSDPERL LGGEEHLGITCALIPTDTDGVEIGARHFPLNVPFQNGPTRGQDVFVPIDFIIGGQTMAGQ GWRMLVECLSVGRGITLPSNATGSLKSVALAIGAYANIRRQFKISIGKMEGIEEPLARIA GNAYVMDAAATLVTYGIMQGEKPAVLSAIIKYHCTHRGQRSIIDAMDIAGGKGIMLGESN FVARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLDEMAAAQDNSVPRFDKLLFS HLGHVGSHKVRSFWLGLTDGRTSATPTKDATRRYYQQINRMSSNLALLSDVSMGVLGGSL KRRERISARLGDLLSQLFLATAVLKRYEDEGRNEADLPLVHWGVQDALHQAEQAIDDLLR NFPNGFVAGVMRAVIFPLGRAHTAPSDYLDHKVAKILQVPSATRSRIGRGMYLTPSEYNP HGLIEAALADVIAADPIHQRICKALGKNLPFTRLDQLAKAALDKGLINAEEQAILVKAEE SRLRTINVDEFEPEALAAAVVPEKEPVQATHTEKKLPEKQNGLRKNEAA >gi|316918777|gb|ADCU01000014.1| GENE 28 30931 - 31269 452 112 aa, chain - ## HITS:1 COG:YPO2911 KEGG:ns NR:ns ## COG: YPO2911 COG0347 # Protein_GI_number: 16123100 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Yersinia pestis # 1 112 1 112 112 188 97.0 3e-48 MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVK IEIVVADDIVDTCVETIMQTAQTGKIGDGKIFVFDVARVVRIRTGEQDEEAI >gi|316918777|gb|ADCU01000014.1| GENE 29 31281 - 32903 1675 540 aa, chain - ## HITS:1 COG:YPO2912_2 KEGG:ns NR:ns ## COG: YPO2912_2 COG0171 # Protein_GI_number: 16123101 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Yersinia pestis # 247 540 3 296 296 544 91.0 1e-154 MSRSLSIALAQLNWLVGDIEGNTERMLNTLCEQRKAGADLVMFSELALSGYPPEDLLYRD DFYLRCQAQLDRLQQASTDIAVLVGHPWREGEHLYNALSLFSEGQLVARYFKQQLPNYGV FDEKRYFSAGHESCVVELKGYRLGLLICEDLWFDGPVDAVAAAGAEVLLSINASPYNREK PYIRKTLLTSHCQRTGLPLVYLNQVGGQDELIFDGCSKGFDASGNMTHRLAAFAEQTALF NLHDMQVEPMVAPAASLPELAQIYEALVLAVHDYVTKNGFQGAVLGLSGGIDSALTLAIA VDALGKDKVQAMMMPFRYTADISIADAKEEAEILGVEFDIVSIEPMFDAFMGQLAPMFAG TERDTTEENLQARCRGVVLMALSNKRRRLVLTTGNKSEMAVGYATLYGDMAGGFDVLKDV PKTLVFKLSEYRNTVSYVIPQRVIDRPPSAELAPDQLDQDSLPPYDILDAILEGYVEQDK SVADLVAAGFDEAVVRKVIRLVDINEYKRRQAAVGPRITARNFGKDRRYPITSGFGRKNW >gi|316918777|gb|ADCU01000014.1| GENE 30 33096 - 34436 1346 446 aa, chain - ## HITS:1 COG:YPO2914 KEGG:ns NR:ns ## COG: YPO2914 COG2204 # Protein_GI_number: 16123102 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Yersinia pestis # 1 446 1 445 445 781 91.0 0 MTQRKPANLLLVDDDPSLLKLLGMRLSSEGFRVTTAESGHDALRVLGREQIDLVISDLRM DEMDGMALFAEIQKRQPGMPVIILTAHGSIPDAVAATQQGVFGFLTKPVDRDALYKAIDE ALAQSMPAAGDDTWREGIVTRSPTMLRLLEQANMVAQSDVSVLINGQSGTGKEVLAQAIH AASPRAGKAFIAINCGALPEQLLESELFGHAKGAFTGAVSSREGLFQAAEGGTLFLDEIG DMPLALQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKAMAKGEFREDLFYRLN VVSLKIPALNERAEDIPLLANHLLRESAQRHKPFVRSFSTDAMRRLMAASWPGNVRQLVN VIEQCVALTSAPVISEALVEQALEGENTVLPTFAEARNHFELNYLRKLLQITKGNVTNAA RLAGRNRTEFYKLLARHELDAADFKE >gi|316918777|gb|ADCU01000014.1| GENE 31 34450 - 35271 651 273 aa, chain - ## HITS:1 COG:no KEGG:Spro_3652 NR:ns ## KEGG: Spro_3652 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 28 273 28 288 290 256 54.0 6e-67 MNKWSVRALFNEHLIDADGLRRMASVLRPFSALGAMLLVPFLLTGCAKTGTGNPVSHAVQ AIIPDSKVVDYQTASCETLWFNDDKEAVENGLYWLRAMDCADRLSGQEARLQARSLGSEN WQRVFKQSVLVGSAEPTAAERRQIIDRLNGYRSEFPASVRPLIQLWREKQMLMINLLDEK ARYQKLQASTDSQLDALRETQGRLQYQLDDTTRKLENLTDIERQLSSRKQMSGEMSDPSV KEDSSDDTGKSESKAPAEASGKPASEPANTDAH >gi|316918777|gb|ADCU01000014.1| GENE 32 35275 - 36711 972 478 aa, chain - ## HITS:1 COG:YPO2916 KEGG:ns NR:ns ## COG: YPO2916 COG0642 # Protein_GI_number: 16123104 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 1 476 6 481 483 703 79.0 0 MISLKRWRLFPRSLRQLVLLAFLLVLLPLLVLAYQAYQGLNNLSSQAADINRTTLSDARR SEAMASLAVEMERSYRQFCVLGDESLSKLYQKQRGQYSQMLERQASVLPDPRYYQKLNGL IDQLATFQCQNNAPVTQASALLAGFSVANGQMVQATRDVIFTRGQQLQQAIAERGQFFGW QALVLFLVSVLLVFLFTRMIIGPVKGVERMINRLGEGKNVGNMVAFRGPREIRSLAQRIV WLSERLSWLESQRHEFLRHISHELKTPLASMREGTELLADEVAGPLTQDQKEVVGILDSS SRHLQQLIEQLLDYNRKLADAPMEKENVNLGEMVGLVVSAHSLPARAKSIRTLTELNVDL CWAEPTLLERVIDNLYSNAVHYGAESGTIWIRSRLAGDKIQIDVANTGAGIPSAEQAMIF EPFYQGSLQRKGAVKGSGLGLSIARDCIRRMQGDLHLVTVDGADVCFRIELPLTAEIS >gi|316918777|gb|ADCU01000014.1| GENE 33 38137 - 42045 3696 1302 aa, chain - ## HITS:1 COG:YPO2921_1 KEGG:ns NR:ns ## COG: YPO2921_1 COG0046 # Protein_GI_number: 16123108 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Yersinia pestis # 7 992 1 986 986 1696 82.0 0 MTDLFPMEIMRGSPALSAFRVTQLLSACQDANLPVNDIYAEYVHFADVSAPLSAEEKATL QRLLKYGPSLAEHEPKGRLLLVTPRPGTISPWSSKATDIAHNCNLPQVIRLERGVAYYVD APELTDAQWQKLQGLLHDRMMERVFHELQDAQKLFSHQSPAPVQSVDMLGKGRSALVEAN TRLGLALADDEIDYLLESFTRLGRNPNDIELYMFAQANSEHCRHKIFNADWIIDGQEQPK SLFKMIKNTYEQTPDYVLSAYKDNAAVMEGSSVGRFFADPESGVYDYHQEDAHILMKVET HNHPTAISPWPGAATGSGGEIRDEGATGRGSKPKAGLVGFSVSNLRIPGFEQPWEQDFGK PERIVNALSIMTEGPLGGAAFNNEFGRPALLGYFRTYEEQVKSHNGVELRGYHKPIMLAG GIGNIRAEHVQKGEITVGAKLIVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNP EMERRCQEVIDSCWQLGDENPIQFIHDVGAGGLSNAMPELVSDGGRGGRFELRDILNDEP GMSPLEVWCNESQERYVMSVAPEKLAQFDAICRRERAPYAVIGEATEERHLTLNDCHFDN QPIDMPLDVLLGKTPKMTRDVTTLKALGDSLNRGSISIADAVKRVMHLPAVAEKTFLITI GDRSVTGMVARDQMVGPWQIPVADCAVTTASLDSYYGEAMSLGERAPVALLDFAASARLA VGEALTNLACTQIGELKRVKLSANWMSAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVG KDSMSMKTRWQEGNQPREMTSPLSLVITAFARVEDVRHTVTPQLHVDQGENTLLLIDLGE GNNALGATALAQVYRQLGDKPADVRNTQKLAGFFNAMQTLVAEGKLLAYHDRSDGGLLVT LAEMAFAGHCALDIDISKLGQDHLAALFNEELGAVIQVRNTDLAAVKAVLTEQGIADIAH EIGHASSGDRFAIQSHGKEVYHEQRSTLRLWWAETTWQMQRLRDNPECADQEHQAKQVES DPGLNVKLTFNPQEDIAAPYIATGSRPKLAVLREQGVNSHVEMAAAFHRAGFDAVDVHMS DILAGRITLDEFHSLVACGGFSYGDVLGAGEGWAKSILFNERARDQFESFFHRPQTLALG VCNGCQMMSNLRELIPGAEHWPRFVRNTSERFEARFSLVEVTASPSLLFQGMEGSRMPIA VSHGEGHVEVRDDAHLAALEHHNLVALRFVDNFGKVTESYPANPNGSVNGITAVTSANGR ATVMMPHPERVFRTVSNSWHPAEWGEDSPWMRMFRNARKQLG >gi|316918777|gb|ADCU01000014.1| GENE 34 42343 - 43839 1220 498 aa, chain + ## HITS:1 COG:YPO2922 KEGG:ns NR:ns ## COG: YPO2922 COG4623 # Protein_GI_number: 16123109 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein # Organism: Yersinia pestis # 1 480 1 480 486 681 71.0 0 MKRIKYNYYLIGIVSALLALALWPNIPWRSGNESQLQQILDRGELRVSTINSPLTYQADG KNVSGLDYELAKRFADYLGVKLKVRVRGTLPELFDDLDSGKSDLVAAGLLYNTERLSRFR TGPAYYSVSQQLVYRQGKPRPKSLNDLSGTLAVQSGSAHVTTLSQYKQNKYPNLTWESSS DLSSNELMQRVVQGKLDYTIADSVSVALFQRIHPQLAVAFDISDEEPVMWYLNRTDDDSL YAAVLDFFSNMVDDGSLARLEEKYLGHVGGFDYVDIKTFLAAIDNVLPDLSDIFKKYADK IDWKLLAAIAYQESHWNPQATSPTGVRGLMMLTRATADGLGVKDRLDPEQSIAGGALYLE RLMDKLPDTIPEDEKIWFALAAYNMGYGHMLDVRQLTQKQGGNPNSWVDVKQRLPMLSQK KYNQNLTYGYARGHEAYQYVENIRRYLVSLEGYLLEKEKQVAAEQTRQALLGKGYPAVSP EDALEGKPKRSPRGLLPF >gi|316918777|gb|ADCU01000014.1| GENE 35 43836 - 44348 412 170 aa, chain - ## HITS:1 COG:yfhC KEGG:ns NR:ns ## COG: yfhC COG0590 # Protein_GI_number: 16130484 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Escherichia coli K12 # 3 161 16 174 178 242 67.0 3e-64 MSELNDAYWMKQALALAQKAWEQGEVPVGAILVLDDEVIGQGWNRPITRHDPTAHAEIMA LQQGGQIVQNYRLLNATLYVTLEPCVMCAGAMVHSRIKRLVYGASDLKTGAAGSLLDVLR HPGMNHQIEITAGVMANECSEMLSQFFQQRREQKKAEREARRLNQPDRAD >gi|316918777|gb|ADCU01000014.1| GENE 36 44551 - 44889 379 112 aa, chain + ## HITS:1 COG:ECs1885 KEGG:ns NR:ns ## COG: ECs1885 COG0607 # Protein_GI_number: 15831139 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli O157:H7 # 7 104 1 97 104 120 57.0 6e-28 MFGQTRMVKKALLAGVMLMASTSLWAAEHWIDVRTPDQYQETHVKGAVNIPLKQLDQRIS EVTQDKNDTLHLYCNTGNQSGKAEKLLQDMGYKNAINEGGLKDVEKTQAMIK >gi|316918777|gb|ADCU01000014.1| GENE 37 45185 - 46336 1143 383 aa, chain + ## HITS:1 COG:ECs4466 KEGG:ns NR:ns ## COG: ECs4466 COG1454 # Protein_GI_number: 15833720 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 383 1 383 383 548 75.0 1e-156 MTTSTFFIPSVNMIGAGCLAEAATTMKGYGYKHALIVTDAVLNKIGVVAKVQSLLADLGI QSAVYDGTHPNPTSTNVAEGLEILRQHKSDCVISLGGGSPHDCAKGIALVAANGGDIRDY EGVDKSAKPQLPLISINTTAGTASEMTRFCIITDIDRHIKMAIVDKHVTPILSVNDPELM AGMPKGLTAATGMDALTHAVEAYVSTAANPITDACALKAVTMISQSLRHAVENGSNMEAR ETMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYDLPHGVCNAVLLPHVQIFNAKVCASRL KDIAAAMGVDVSNMNDQQGADACIAEIRKLAKDVNIPAGLTELNVKIEDLPTLATNALKD ACGFTNPIQATHEEIVAIFKAAM >gi|316918777|gb|ADCU01000014.1| GENE 38 46540 - 47439 612 299 aa, chain - ## HITS:1 COG:RSp0662 KEGG:ns NR:ns ## COG: RSp0662 COG0583 # Protein_GI_number: 17548883 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 294 1 295 297 312 51.0 5e-85 MYDLNEMFLFVHVVENQGFAAAGRALGMPKSKISRRIAQLEERLGIRLINRSTRRFSVTD LGQEYYHHCRAMVVEAEAAEELVARRHSEPCGTIKISCPTSLLDYWVGSMLSRFMLRYPR VNLQIESTNRKVDVIHEGIDIAIRVRMSPLEDSELVVKRLGNSRQMLVASPALIDGRNMT PAALSELPALHWGWVQSDYSWRLQGPNSATAHISFQPRIVTDNLSLLCQAAVAGLGVVHL PYVVARSTLASGQLVDVLPQWHPSSGLIHAAYPSRRGLLPAVKTLLDFLGEEFQHSDLM >gi|316918777|gb|ADCU01000014.1| GENE 39 47556 - 48425 752 289 aa, chain + ## HITS:1 COG:YPO2149 KEGG:ns NR:ns ## COG: YPO2149 COG1741 # Protein_GI_number: 16122382 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Yersinia pestis # 1 286 1 286 289 395 65.0 1e-110 MKKIIGVYSAPGSHWVGDGFPVRSLFSYNQQGEYISPFLLLDYAGPQRFSATDKRRGVGE HPHRGFETVTIVYQGELEHRDSTGNGGFIGAGDVQWMTAGAGILHEEFHAPSFAATGGTL EMVQLWVNLPAKDKMTEPGYQTLLKAQIPQLDLENNAGQLRVIAGEFSGHQGPAHTFSPL DVWDMKLNAGKTTNFTLPAGRNAILVVLKGAVEVNGQKLLHDAELALFSVEGESITLTAH SDSVALLLSGAPLDEPIVGYGPFVMNSQQQIVQALSDFQTGHFGRMTSQ >gi|316918777|gb|ADCU01000014.1| GENE 40 48497 - 49180 761 227 aa, chain + ## HITS:1 COG:STM0950 KEGG:ns NR:ns ## COG: STM0950 COG1335 # Protein_GI_number: 16764311 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Salmonella typhimurium LT2 # 6 226 5 225 225 300 70.0 1e-81 MNNHIANFNGAKPTIDPNDTALLLIDHQSGLFQVVKDIDLPQLRANAIALAKAANLLQIP VITTASVPQGPNGPLIPEIHAAAPHATYVARKGQINAWDSQEFVDAVKATGKKTLVIAGT ITSVCLAFPCISAIYEGYKVFAVVDASGTVSQMASDLTIARLTQAGVVPIDTMGTISELQ GTWNRPDAEQWAEVYAQAMPHYQLLIESHTRAQQAARDNEVLDSQRS >gi|316918777|gb|ADCU01000014.1| GENE 41 49220 - 49870 346 216 aa, chain - ## HITS:1 COG:YPO2924 KEGG:ns NR:ns ## COG: YPO2924 COG0560 # Protein_GI_number: 16123111 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Yersinia pestis # 5 216 4 215 215 281 72.0 8e-76 MTDNPSAKNTHRVVFFDLDGTLHQQDMFGRFLRFLIWHMPQNLLLVIPLLPVIAFGLIVQ GRATRWPISLLLWAITFGHRESRLNALERQFVQAFKRDVVPFPVVLGRLKEYLGSQTAEV WLITGSPQRLVEQVYADEPFIHQVRMIGSRMVRRNGGWVMPLRCLGQEKVVQLEMQLGKP LKLFSGYSDSQQDNPLLAFCEHRFRVSPTGELQQLE >gi|316918777|gb|ADCU01000014.1| GENE 42 50175 - 50396 177 73 aa, chain + ## HITS:1 COG:STM2576 KEGG:ns NR:ns ## COG: STM2576 COG1145 # Protein_GI_number: 16765896 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Salmonella typhimurium LT2 # 1 73 14 86 86 110 73.0 4e-25 MCEPECPNQAISMGMDIYEIDAERCTECVGHYDEPTCMKVCPIDNTIIRDPAHLESNEQL WDKFVVLHHSDKI >gi|316918777|gb|ADCU01000014.1| GENE 43 50437 - 51117 680 226 aa, chain - ## HITS:1 COG:YPO1067 KEGG:ns NR:ns ## COG: YPO1067 COG3015 # Protein_GI_number: 16121368 # Func_class: M Cell wall/membrane/envelope biogenesis; P Inorganic ion transport and metabolism # Function: Uncharacterized lipoprotein NlpE involved in copper resistance # Organism: Yersinia pestis # 1 224 16 239 242 279 59.0 4e-75 MKKLAISLFLAAGAMALFGCNARSQYVEQPLQPMAQSFQGVLPCADCQGMDTSLFLEKDG TFVLKEVYRGTRDGDQAFAEYGSWQRTADKLVLTGTDGSKRYFRPKGNDLNMLDASGNDI DSALNYTLKATDAPLPVTPMTFKGMYVYMADAATFHDCATGKNFPVSNNIALEQGYSRAQ GEAGQPVFLEIQAHFAITPSMEDGMVEKAIVPDGQPRFDAKGACAN >gi|316918777|gb|ADCU01000014.1| GENE 44 51180 - 51596 440 138 aa, chain - ## HITS:1 COG:YPO1066 KEGG:ns NR:ns ## COG: YPO1066 COG1186 # Protein_GI_number: 16121367 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Yersinia pestis # 1 135 1 135 138 157 66.0 6e-39 MLQITNTVSIADDEIELTAIRAQGNGGQNVNKSSTAIHLRFDIRTSSLPPLYQERLLAMS HHLITSDGIVVIKAQEHRSQELNREAALARLAELIKSAGVVEKVRRPTKPSRNAKRKRVE SKTRRGVTKSLRGKISAD >gi|316918777|gb|ADCU01000014.1| GENE 45 51598 - 52146 539 182 aa, chain - ## HITS:1 COG:YPO1065 KEGG:ns NR:ns ## COG: YPO1065 COG4681 # Protein_GI_number: 16121366 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 181 1 181 182 250 67.0 1e-66 MALKATIYKANVNIADMDRHFYHDASLTLAQHPSETEQRMMLRLLAWICHANERLTFTKG LCADDEPELWLRNDYNGIDLWIELGLPDEKRLKKACSLSQEVVLYAYSERAGRVWWQQNQ AKLSGLKALSIRFVSDDIMAQLPKFASRTMDLQATIQEGAIWLSDAQQNVEIQFDHWKPA GV >gi|316918777|gb|ADCU01000014.1| GENE 46 52373 - 52573 279 66 aa, chain + ## HITS:1 COG:no KEGG:YPTB2982 NR:ns ## KEGG: YPTB2982 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis # Pathway: not_defined # 1 65 1 65 66 100 87.0 1e-20 MQQYSELVRRMYAQIGSGDLGYIPDALGCVLKALDEVAANEALPSAVREQAAYAAANLLV SDYVEN >gi|316918777|gb|ADCU01000014.1| GENE 47 52560 - 52820 235 86 aa, chain + ## HITS:1 COG:YPO1064 KEGG:ns NR:ns ## COG: YPO1064 COG4568 # Protein_GI_number: 16121364 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Yersinia pestis # 1 86 1 86 86 128 77.0 2e-30 MSKIEEYQPINCDDYDNLELACQHHLILALELRNGEKLQAKANDLISRKHVEYLIIEQDG EPRELRLDHIASFSHPEIGTVNVSIS >gi|316918777|gb|ADCU01000014.1| GENE 48 52903 - 53220 433 105 aa, chain - ## HITS:1 COG:YPO1063 KEGG:ns NR:ns ## COG: YPO1063 COG2863 # Protein_GI_number: 16121363 # Func_class: C Energy production and conversion # Function: Cytochrome c553 # Organism: Yersinia pestis # 1 105 1 105 105 127 64.0 5e-30 MMKKLMAAVVLTAVASLPVLAAGDAAAGKSKAMTCVACHGMEGKVTVPMYPNLAGQNAMY LEQALKDYKSGGRSGGQAEVMKAYVGNLSEQDISDLAAYYASLKP >gi|316918777|gb|ADCU01000014.1| GENE 49 53565 - 54863 888 432 aa, chain - ## HITS:1 COG:YPO1062 KEGG:ns NR:ns ## COG: YPO1062 COG0037 # Protein_GI_number: 16121362 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Yersinia pestis # 5 429 17 455 460 483 57.0 1e-136 MRIASKLQGRSQLMVAFSGGLDSTVLLHALAQLRMQNFPHLQLRAVHVHHGLSRYADLWV DHCESVCRQWQVPLKVLRVKVDSQRSGVEAAARDARYHAIADEISHHETLLTAQHLDDQC ETFLLALKRGSGPTGLSAMASHMPFFSTEQLRPLLDISRAQLEEYAANYDLKWVEDDSNQ DDRFDRNFLRLRVIPNLRDRWPHFPEAVARSASLCAEQEQLLDELLLESLQSLMSEDDSL NIDGLLPMSEAKRYALLRRWIACFGVMMPTREQLQLLWSEVAMAREDAEPQLQLGKSQIR RYRQHLYLLPPLRSLKDQVIAWDPRESLSLPDGLGELQLGSRGICVRAPKFDEAVSIRFA AHGTLRIIGRRHSRPIKKIWQEHNIPPWERERTPMLYYGETLIAALGVFITQNGQAVADE PVWNIHWTKDWM >gi|316918777|gb|ADCU01000014.1| GENE 50 54963 - 56447 1133 494 aa, chain - ## HITS:1 COG:ECs0734 KEGG:ns NR:ns ## COG: ECs0734 COG3104 # Protein_GI_number: 15829988 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli O157:H7 # 2 492 3 493 493 634 67.0 0 MKTPSQPRAIYYVVALQIWEYFSFYGMRALLILYLTHQLGYNDTHAFSLYSAYASLVYVT PIIGGILADKLLGNRMAVIAGAILMTLGHVVLGVSAVSPSSLYLALAIIVCGYGLFKSNI SCLLGELYSPEDPRRDGGFSLLYAAGNIGSIVAPIACGLAAEQYGWHVGFALAGIGMFAG LIIFLCGHKHFRHTIGVNHQGMKNTTLRIPNWGWLLAAVILSPLFVAVLFWRDWSSYALA LVCAGAIIILAGIYRRAEPEQRKGLLQIVILMLLGTLFWAFAQQGGSSISLFIDRFVNRQ WFSFTIPTAVFQSVNGFAVMLSGVALAWLVRENSNGNRILRIWGKFALGLALISAGFGIL TFNARWAAVHGQGSMALTVLGLAVMGCAELFIDPVAMAQITRLKIPGVTGVLTGIYMLAT GSIANYLAGIIANQTAEVSFEQGGEATAHSVMAYVSVFSDIAWGALGCVGLVALIWLCHM LMVRRNAIAAESCE >gi|316918777|gb|ADCU01000014.1| GENE 51 56521 - 58662 2373 713 aa, chain - ## HITS:1 COG:ECs5113 KEGG:ns NR:ns ## COG: ECs5113 COG1982 # Protein_GI_number: 15834367 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 712 1 712 715 1350 88.0 0 MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWD TYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQS TDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDI SISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLI DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVH AVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIY ETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNA GKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDID NDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIG IDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHH NLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVM PGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIKEQK >gi|316918777|gb|ADCU01000014.1| GENE 52 58813 - 60135 1162 440 aa, chain - ## HITS:1 COG:STM2558 KEGG:ns NR:ns ## COG: STM2558 COG0531 # Protein_GI_number: 16765878 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 440 1 440 443 670 85.0 0 MSSSKKIGLIACTGVVAGNMMGSGIALLPANLASLGSIAIFGWIISLIGAMSLAYVYARL ATKNPQEGGPIAYAGEIGPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNSPIA AGIACIAIVWIFTFVNMLGGTWVSRLTTIGLVLVLIPVIGTAIAGWAWFDPATYHANWNT SGGTDSHAVIKSILLCLWAFVGVESAAVSTGMVKNPSRTVPLATMLGTGLAGIVYIAATQ VIAGMYPAHEMAASGAPFAMSASTMVGGWAAPAVSAFTAFACLTSLGSWMMLVGQAGVRA AKDGNFPKVYGELDKNGIPKKGLLLAAVKMTVLMILITVMSASGGKASDLFGELTGIAVL LTMLPYFYSCVDLIRFEGANVKNLLSLVASVLGCCFCFIALMGAGSFELSGTFIVSLVIL MFYARKMNSRKPQASADSNA >gi|316918777|gb|ADCU01000014.1| GENE 53 60562 - 62172 1091 536 aa, chain - ## HITS:1 COG:STM2557_1 KEGG:ns NR:ns ## COG: STM2557_1 COG3710 # Protein_GI_number: 16765877 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Salmonella typhimurium LT2 # 1 203 1 183 183 181 48.0 4e-45 MQEQTFRVGEWLVLAADNKITRDGRLLVLEPRLIDMLSYFAHHPDTVLSRDELIDNVWKR NIVTNHVVTQCISELRKYLKDGRPDAPEYIVTVPKRGYKLVEPVIWCEEGGADFTMPAQA PVKVVIDHEPEDGSGQLPLSTTVAESQRQQADALNSPATATETVTKSKGEKKRLSKLWHS RFWVWVAFLSSLLLCISLVGLAVFNQRVPVAPAPMLLNPRDIDIRIQGGNSCTNWTNQLS YVVGLSEMLAQGLNTHSTFLVHDQTNYNYGGPSSSGKSMYIEFVNQRHYRAQQCFLSVRL IDNADSSVMLEKRYFITTDNLLTVQKDFIDSMFQTLKVVQPSSMVQRIETLVPQHSQVLQ LYYQAHQLLIQGDSDSLNQASVLLAQITKQSPEFIYARAEKALVDILLNSYQPFNASDLA DLRKEITDVEAIPLLQNSAIIQQIYTVDYLSQGKVDEAFKMINKGIDLEMSWLNYVLLGK VYELKGQNNLAADAYITAFNLRPGNNTLDWIKNGVFQTNVIRVAPYLANYDFSNNN >gi|316918777|gb|ADCU01000014.1| GENE 54 62878 - 63837 1188 319 aa, chain - ## HITS:1 COG:YPO1060 KEGG:ns NR:ns ## COG: YPO1060 COG0825 # Protein_GI_number: 16121360 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Yersinia pestis # 1 319 1 319 319 590 92.0 1e-168 MSLNFLDFEQPIAELEAKIDSLTSVSRQDEKLDINIDEEVQRLRDKSVELTRKIFSDLGA WQVAQLARHPRRPYTLDYIEHIFTDFDELAGDRAYADDKAIVGGMARLNGRAVMIIGHQK GRETKEKIRRNFGMPAPEGYRKALRLMEMAERFKLPIITFIDTPGAYPGVGAEERGQSEA IARNLREMSGLTVPVICTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKS ADKAPLAADAMGITAPRLKELKLIDSVIPEPLGGAHRDVPAMAASLKAQLLADLSDLDVL ETEELLNRRYQRLMNYGYC >gi|316918777|gb|ADCU01000014.1| GENE 55 63850 - 67332 2993 1160 aa, chain - ## HITS:1 COG:YPO1059 KEGG:ns NR:ns ## COG: YPO1059 COG0587 # Protein_GI_number: 16121359 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Yersinia pestis # 1 1160 12 1171 1171 2164 89.0 0 MAEPRFIHLRVHSDYSMIDGLAKVGPLVKKVAALGMPAFAITDHTNMCGLVKFYGSAHGA GIKPIIGADVFVKSELLGDELSHLTILAANNTGYQNLTLLISHAYQRGYGADGPVIDRDW LVEYREGLILLSGGRQGDVGKMLLRGNQQLAHECVDFYQQYFADSYYLELIRTGRPDEES YLHFAVALAEERELPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPKNYSAQQYM RSEEEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPQFPTGEMSTEDFLVAKSKEGL EERLEFLFPDPEVRAKRRPEYDERLDVELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIDHVAE MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPEPGMTLAKAFEAEPQ LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDSEGNHPVTQ FDKSDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKAGEDPIDIAAIPLDDKKSFDML QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE VSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM AKQRSVFKEGAERMGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGQYHFHVNDDGEIVYGIGAIKG VGEGPIEAIIDARNEGGHFKELFDLCARTDTKKLNRRMLEKLIMSGAFDRLGPHRAALMN SLNDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEKSYSSVAPWPAQVVLDGERETLGLY LTGHPITQYLKEIERYAGGMRLKDMHPTDRGKMTTAVGLVVAARVMTTKRGNRIGVCTLD DRSGRLEVMLFTDALDKYQHLLEKDRILIASGQVSFDDFSGGLKMIARELMDISEAREKY ARGLAISLTDRQIDDQLLNRLRDSLEPHRSGTIPVHLYYQRDNARAKLRFGAAWRVTPTD RLLVDLRTLVGNEQVELEFD >gi|316918777|gb|ADCU01000014.1| GENE 56 67514 - 68137 543 207 aa, chain - ## HITS:1 COG:YPO1058 KEGG:ns NR:ns ## COG: YPO1058 COG0164 # Protein_GI_number: 16121358 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Yersinia pestis # 11 207 1 197 198 330 84.0 1e-90 MGRNSMSANLINDIFVYPSAQFIAGVDEVGRGPLVGAVVTAAVILDPARPIIGLADSKKL SEKRRNALYEEIVEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLSVEPDYVLIDG NRCPKLPMASQAVVKGDSRVAEISAASILAKVTRDREMEVLDAQFPEYGFAQHKGYPTAF HLERLAQLGATVHHRRSFGPVKRVLGI >gi|316918777|gb|ADCU01000014.1| GENE 57 68150 - 69340 964 396 aa, chain - ## HITS:1 COG:YPO1057 KEGG:ns NR:ns ## COG: YPO1057 COG0763 # Protein_GI_number: 16121357 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Yersinia pestis # 18 396 16 394 394 644 85.0 0 MTLSQNASDSLPADRHSRPLTIGLVAGETSGDILGAGLIRALKSRHPNVRFVGVAGPLMQ AEGCEAWFEMEELAVMGIVEVLERLPRLLKIRRELTQRFSELKPDVFVGIDAPDFNITLE GRLKQRGIRTIHYVSPSVWAWRQKRVFKIGKATDLVLAFLPFEKAFYDKFNVPCRFIGHT MADAMPLNPDKQAARQALGIAPDALCLALLPGSRSAEVEMLSADFLKTAMILREKYPALE IVVPLVNAKRREQFERIKAEVAPDLTAHLLDGQARNAMYASDAALLASGTAALECMLAKC PMVVGYRMKPFTFWLAERLVKTDYVSLPNLLARRELVQELLQHDCQPDKLAAALLPLLEG GESTKALQKTFLELHQSIRCGADEQAADAVLSLVNQ >gi|316918777|gb|ADCU01000014.1| GENE 58 69344 - 70132 797 262 aa, chain - ## HITS:1 COG:STM0228 KEGG:ns NR:ns ## COG: STM0228 COG1043 # Protein_GI_number: 16763618 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Salmonella typhimurium LT2 # 1 262 1 262 262 453 86.0 1e-127 MIDPTAFIHPSAIVEDGAVIGAGVHIGPFCYIGSQVEIGEGTVLKSHVVVNGITKIGRDN EIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTAQGGNLTKVGSDNLLMIN AHIAHDCVIGNRCIFANNATLGGHVTVDDFAIIGGMTAVHQFCVIGAHVMVGGCSGVAQD VPPYVIAQGNHATPFGLNIEGLKRRGFDKESLHAIRNAYKILYRSGKTLEEAKPEIAELA QQHAAVQLFVDFFERSTRGIIR >gi|316918777|gb|ADCU01000014.1| GENE 59 70136 - 70591 449 151 aa, chain - ## HITS:1 COG:YPO1055 KEGG:ns NR:ns ## COG: YPO1055 COG0764 # Protein_GI_number: 16121355 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Yersinia pestis # 1 151 1 151 181 271 88.0 3e-73 MTTDTHTLNISEILELLPHRFPFLLVDRVLDFEEGKFLRAVKNVTFNEPFFQGHFPGKPI FPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDDARFKRPVQPGDQMILEVEFLKE RRGVARFNGVAKVDGKIVCEASMMCARSREA >gi|316918777|gb|ADCU01000014.1| GENE 60 70873 - 71895 736 340 aa, chain - ## HITS:1 COG:YPO1054 KEGG:ns NR:ns ## COG: YPO1054 COG1044 # Protein_GI_number: 16121354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Yersinia pestis # 1 340 1 340 340 565 84.0 1e-161 MASIRLADLAQQLNAELHGDGDIVITGVASMHSAKSHQITFLSNSRYREQLAACNAGAVV LTEADLPFCTSAALVVRNPYLTYALMAQIMDTTPAPAKDIAPSAVIDVTAQLGNNVSVGA NAVIEEGVVLGDNVIIGAGCFVGKFTKIGSGTRLWANVSVYHQIDIGENCLIQSGTVIGA DGFGYANDRGNWIKIPQLGTVRIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHN VMIGDNTAVAGGVIMAGSLKIGRYCQIGGASVINGHMEICDKAVVTGMGMVMRPITEPGI YSSGIPLQPNKAWRKTAALVMNIDEINKRLKAVEKKVNND >gi|316918777|gb|ADCU01000014.1| GENE 61 71899 - 72420 549 173 aa, chain - ## HITS:1 COG:YPO1053 KEGG:ns NR:ns ## COG: YPO1053 COG2825 # Protein_GI_number: 16121353 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Yersinia pestis # 9 173 1 165 165 180 81.0 2e-45 MGDGKESKLKKWLYAAGLGMALAVSANVQAADKIAIVNVSSIFQQLPQRATVAKQLENEF KSRATELQSQERDLQSKMQKLQRDGSTMKASDRTKMEKDIMAQRDAFSQKAQAFEQDNRR RQAEERNKLLSRIQDAVRTVAKDKGYDLVIDANAVAYADSSNDITAQVLKQVK >gi|316918777|gb|ADCU01000014.1| GENE 62 72571 - 74958 2275 795 aa, chain - ## HITS:1 COG:ECs0179 KEGG:ns NR:ns ## COG: ECs0179 COG4775 # Protein_GI_number: 15829433 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Escherichia coli O157:H7 # 1 795 1 810 810 1317 81.0 0 MAMKKLLIASLLFGSATVYGADGFVVKNIHFEGLQRVAVGAALLNMPVRVGDTVSDEDLS NTIRALYATGNFEDVRVLRDGDNLIVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR VGEALDRTMLSSIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFTEGKSAQIQQI NIVGNHAFTSEELIARFQLRDEVPWWNLVGDRKYQKQKLSGDLETLRSFYLDRGYARFNI DSTQVSLTPDKKGIYITINITEGDQYKLTGVEVNGNMAGYSTDINRLTTIEPGELYNGAK VTKMEDDVKKLLGRYGYAYPKVQTQPEINDADKTVKLHMNVDAGNRYYVRNIKFVGNDTS KDSVLRREMRQMEGAWLGSDLVDQGKERLNRTGYFETVDVDTQRVPGAPDQVDVTYKVKE RNTGTFNFGVGFGTESGVSFQVGVQQENWLGTGNTVGISGTKNDYQTYAELSMTNPYFTV DGVSLGGRIFYNDFKADDADLSDYTNSSYGLDGTLGFPINENNSLRTGLGYVHNSLSDMQ PQVAMWRYLKSVGQNPNDTDKADYTADDFTWSLGWTYNNVDRGFFPTQGTKASLNGKVTI PGSDNEYYKLTFDSQSYLPLDDDRSWVVMGRSRLGYGDGLGGKEMPFYENFYAGGSSSVR GFQSNNIGPKAVYLNPNGSVDQSKTSDDDAVGGNAMAVASVELITPTPFVGEKYANSLRT SIFMDAGTVWDTNWDKSAYPNQPDYSDPSNIRVSAGLALQWMSPLGPLVFSYAQPVKKYD GDKAEQFQFNIGKTW >gi|316918777|gb|ADCU01000014.1| GENE 63 74996 - 76351 1020 451 aa, chain - ## HITS:1 COG:YPO1051 KEGG:ns NR:ns ## COG: YPO1051 COG0750 # Protein_GI_number: 16121351 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Yersinia pestis # 1 451 1 451 451 729 82.0 0 MTNILWSLIAFLVALGVLITVHEFGHFWVARRCGVKVERFSIGFGKALWRRIDRSGTEYV VALIPLGGYVKMLDERVETVAPEYRHQAFNNKTVWQRAAIVSAGPIANFLFAIVAYWLVF VIGVPSVRPVIGEIVPQSVAAQADISPGLELKSVAGIETPDWDAVRLALVGKIGSKETTV EVAPFGSENTTRKTLDLTHWQFEPDKQDPVVALGIMPRGPQIEPVLAEVQKDSAAQKAGL QVGDRIVKVDGQPLKNWLTFVKLVRESPNESIAVEVERNGNTQSVHLTPDSKSVGAGKIE GFAGVAPKVIPLPEEYKTIRQYGPFMAIYQASDKTWQLMKLTVSMIGKLITGDVKLNNLS GPISIAQGAGMSAEYGLVYYLMFLALISVNLGIINLFPLPVLDGGHLLFLAIEKLKGGPV SERVQDFSYRIGSILLVLLMGLALFNDFSRL >gi|316918777|gb|ADCU01000014.1| GENE 64 76377 - 77120 752 247 aa, chain - ## HITS:1 COG:YPO1050 KEGG:ns NR:ns ## COG: YPO1050 COG0575 # Protein_GI_number: 16121350 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Yersinia pestis # 1 246 37 282 282 348 76.0 8e-96 MLAAWEWGQLAGFTTNSQRIWGAVICGLVLAAMLLSLPEFNRSVHLPLIAGSLWTAVVWW IVALLLVLFYPKSAGWWKHSRVLKIIFGAATIIPFFWGMIALRQHGYETDHYQGAWWLLY VMFLVWGADSGAYMFGKLFGKNKLAPKVSPGKTWEGFIGGLITSALISWGFGLYAPLSIN PKTLLICSIVAALVSVLGDLTESMFKREAGIKDSGHLIPGHGGVLDRIDSLTAAVPVFAC LMLLVFY >gi|316918777|gb|ADCU01000014.1| GENE 65 77238 - 77999 568 253 aa, chain - ## HITS:1 COG:YPO1049 KEGG:ns NR:ns ## COG: YPO1049 COG0020 # Protein_GI_number: 16121349 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Yersinia pestis # 16 249 16 249 252 397 79.0 1e-110 MSSTQSPMTDGIVCGPQHVAIIMDGNGRWAKRQGKMRVFGHKAGVKSVRRSVRFAVSHGI KALTLYAFSSENWNRPEHEVSALMELFIRALDGEVKSLHKHNVRLKIIGDIGRFSSRLQE RIRRSEQLTENNDGLTLNIAANYGGRWDIMQGVKTLAAQVKAGVLQPDDITEDLLSQQVC LHDLAPVDLVIRTGGEHRVSNFLLWQIAYSEFYFTDVLWPDFDELTFEGALNAFAQRERR FGGTTPINAPDAP >gi|316918777|gb|ADCU01000014.1| GENE 66 78276 - 79475 838 399 aa, chain - ## HITS:1 COG:YPO1048 KEGG:ns NR:ns ## COG: YPO1048 COG0743 # Protein_GI_number: 16121348 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Yersinia pestis # 1 397 1 396 398 562 73.0 1e-160 MKQLTILGSTGSIGTSTLAVVRANPDDFSVTALVAGKNVDVMFQQCVEFAPRYVSMADEN AAQALRLRLIDAGLGDIEVSAGEQAACDLAALDDVDQVMAAIVGAAGLMPTLAAIKANKQ VLLANKEALVTCGRLFMDALKQSKAQLLPIDSEHNAIFQSLPEGVQHNLGFASLSDHGIS RIVLTGSGGPFRQLPLKDFAAVTPDQACAHPNWSMGRKISVDSATMMNKGLEYIEARWLF NASESEMEVIIHPQSVIHSMVRYRDGSVIAQLGSPDMRTPIAHAMAYPNRVETGVEPLDF CKIGALTFEQPDRVRYPCLQLAIDASRAGQAATTALNAANEISVDAFLHEKIRFTDIAAL NQDVLSTLSCREPQSVAEVLDIDRQAREVAGRLCANFRI >gi|316918777|gb|ADCU01000014.1| GENE 67 79644 - 80201 639 185 aa, chain - ## HITS:1 COG:YPO1047 KEGG:ns NR:ns ## COG: YPO1047 COG0233 # Protein_GI_number: 16121347 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Yersinia pestis # 1 184 1 184 185 256 82.0 2e-68 MINEIKKDAETRMDKCVEAFKSNISKIRTGRAHPNLLDGISVEYYGSATPLRQVANVVAE DSRTLAITVFDRSLSAAVEKAIMASDLGLNPMSAGAVIRVPLPALTEERRKDLIKLVRAE AEQGRVSVRNVRRDANDKVKVLLKDKEISEDEDRKSQDEVQKMTDVMIKKIDSALADKEK ELMEV >gi|316918777|gb|ADCU01000014.1| GENE 68 80392 - 80520 157 42 aa, chain - ## HITS:1 COG:YPO1046 KEGG:ns NR:ns ## COG: YPO1046 COG0528 # Protein_GI_number: 16121346 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Yersinia pestis # 1 42 200 241 241 83 95.0 8e-17 MDLAAFTLARDHNLPIRVFNMNKPGALRRVVMGEKEGTLISK >gi|316918777|gb|ADCU01000014.1| GENE 69 80489 - 81118 652 209 aa, chain - ## HITS:1 COG:YPO1046 KEGG:ns NR:ns ## COG: YPO1046 COG0528 # Protein_GI_number: 16121346 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Yersinia pestis # 1 205 1 205 241 366 91.0 1e-101 MATNSKPVYQRILLKLSGEALQGAEGFGIDASVLDRMAQEVKELVELGIQVGVVIGGGNL FRGAGLAQAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDNYSWA EAISLLRNNRVVIFSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVYSADPVTNPD ATLFDQMTYQDVLGKRTESHGFGSFHSGS >gi|316918777|gb|ADCU01000014.1| GENE 70 81325 - 82176 1013 283 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 282 1 281 283 394 72 1e-108 MAEITATLVKELRERTGAGMMDCKKALTEAQGDIELAIENMRKSGAIKAAKKAGNVAADG VIKTKIVGNYGVILEVNCQTDFVAKDGGFQAFAEKVLDAAVAGKITDVEVLKAQFEEERV ALVAKIGENINIRRVASLEGDVLASYLHGARIGVLVAAKGADEELAKQLAMHVAASKPEF VKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVSLTGQAFVMDPSK TVGQLLKEHNADVTNFIRFEVGEGIEKATVDFAAEVASMTKGA >gi|316918777|gb|ADCU01000014.1| GENE 71 82424 - 83149 1202 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16759206|ref|NP_454823.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 241 1 241 241 467 97 1e-130 MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELQKI SARKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ SQDGTFEKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLG IPVFSIVDTNSDPDGVDFVIPGNDDAIRAVSLYLNAVAATVREGRSQDLATQAEESFVEA E >gi|316918777|gb|ADCU01000014.1| GENE 72 83524 - 84324 830 266 aa, chain + ## HITS:1 COG:YPO1043 KEGG:ns NR:ns ## COG: YPO1043 COG0024 # Protein_GI_number: 16121343 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Yersinia pestis # 1 264 1 263 263 469 85.0 1e-132 MAISIKTPEQIEKMRVAGRLAAEILEIIEPYVVPGVSTGELDRICDDYITQKQQAISACL GYHGYPKSVCISVNEVVCHGIPSDEKILKDGDIVNIDVTVIKDGWHGDTSKMFIVGKPTI LGERLCRITLESLYLALKMVKPGIRLRTIGAEIQKFVESHGFSVVREYCGHGIGEVFHEE PQVLHYNADDGGVVLQKGMTFTIEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVV TDNGCEILTLREEETDLPRVIVHENV >gi|316918777|gb|ADCU01000014.1| GENE 73 84773 - 85474 467 233 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_1438 NR:ns ## KEGG: NT01EI_1438 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 2 233 3 310 310 235 47.0 1e-60 MFPDWLQSLALFWLFSALISSVIIYLDITFNRPQPMKIMVLAWSINALYFSVIALVAYFW FGRAKSHTMPMMEHHMQGMDMDMPSKPITWKGIFTVSTHCGAGCTLADIIGEVLVFFIPV TLAGSAVFGSWGLDFVLALLLGIFFQYLPGREMGLAPKTALKKAIQADILSLISWQIGMY IWMAIVLFGIFTPTMPRDSAVYWFMMQIAMIFGFMTAYPVNGLLCKKGIKHVM >gi|316918777|gb|ADCU01000014.1| GENE 74 85825 - 88494 2153 889 aa, chain + ## HITS:1 COG:YPO1042 KEGG:ns NR:ns ## COG: YPO1042 COG2844 # Protein_GI_number: 16121342 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Yersinia pestis # 18 888 40 911 912 1390 79.0 0 MPIPHPTLLDPMIEPLIQPPSPDNFAASDLECAPLKQSLERFQQWMSAAFQAGESAESLI AARTLYIDRLLTRLWIHLGFKERQGIALIAVGGYGRGELHPLSDIDLLILSQTSLDDPDA QRISELITLLWDLKLEVGHSVRTLDECLQEGLSDLTVATNLIESRLVYGDVALFLQLQKQ IFSDEFWPSPKFFDAKIQEQKDRHQRYHGTSYNLEPDIKTSPGGLRDIHTLLWVAHRHFG ATSMNEMVGFGFLTEAERDELNECQSFLWRIRFALHLVLNRYDNRLLFDRQFSVARLLGY EGEGNAPIERMMKDFYRMTRRVGELNQMLLQLFDEAILALETNEKPRPLDDHFQLRGNLI DLRDAETFMRNPVTILQMFYVMAKNQEITGIYSTTLRHLRYARRHLAQPLCDLPEARKLF MAILRHPGAVNRALLPMHRHSVLWAYMPQWGKIVGQMQFDLFHAYTVDEHTMRVLLKLES FSDENTRQRHPLCVELYPRLPQPELLLLAALFHDIAKGRGGDHSILGAQDVLEFAQLHGL NSRETQLVSWLVRCHLLMSVTAQRRDIQDPAVIQQFSAEVQSETRLRYLVSLTVADICAT NETLWNSWKQSLLRELYFATEKQLRRGMQNTPDMRERVRHHRLQALALLRMDNINEEALH HIWSRCRADYFLRHNPNQLAWHARHLLKHDASKPLVLVSHLATRGGTEIFIYSPDRPYLF AAVAGELDRRNLSVHDAQIFTNRDNFAMDTFVVLEPDGSPLAQDRHATIKHSLEQALTQQ HYRHPRTRRPSPKLRHFTVPTEVSFLPMHNERRSYMELVALDQPGLLAQVGEVFAEMGLS LHSARITTIGERVEDLFILADGERKALSIKMQSELAQRLTEALDPTDKG >gi|316918777|gb|ADCU01000014.1| GENE 75 88655 - 89479 868 274 aa, chain + ## HITS:1 COG:STM0213 KEGG:ns NR:ns ## COG: STM0213 COG2171 # Protein_GI_number: 16763603 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Salmonella typhimurium LT2 # 1 274 1 274 274 498 93.0 1e-141 MQQLQTLIENAFERRADITPANVDNITREAVNQVIALLDSGELRVAEKINGEWVTHQWLK KAVLLSFRINDNKLMEGAETRFYDKVPMKFADYDEARFQREGFRVVPPASVRQGAFIARN TVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIED NCFIGARSEVVEGVIVEEGSVISMGVYLGQSTKIYDRETGEVHYGRVPAGSVVVSGNLPS KDGKYSLYCAVIVKKVDAKTRGKVGINELLRSID >gi|316918777|gb|ADCU01000014.1| GENE 76 89599 - 90009 487 136 aa, chain + ## HITS:1 COG:no KEGG:Spro_3794 NR:ns ## KEGG: Spro_3794 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 9 135 1 127 129 208 91.0 4e-53 MKDTKGASMYDNLKSLGINQPEEIDRYSLRQEANNDILKIYFRKDKGEFFAKSVKFKYPR QRKTIVADNAGQGYKEIHEINPNLRYVIDELDQICKRDQVEVDLKHKILDDLRHLESVVA NKIAEIEADLEKLTQK >gi|316918777|gb|ADCU01000014.1| GENE 77 90541 - 90990 508 149 aa, chain - ## HITS:1 COG:YPO1039 KEGG:ns NR:ns ## COG: YPO1039 COG0716 # Protein_GI_number: 16121339 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Yersinia pestis # 1 149 1 149 149 233 76.0 7e-62 MAQVGIFVGTVYGNALMAAEDAENILKAQGHDVKLFEEGTLEEWQFYRNHYVLIVTSTTG QGDLPDSIAPLFHAVRDNVGYQPELRYGLIALGDSSYTHFCGAGHQFDELLQEQKATRIG ELLEVDAQVDAEPEVVTGPWVEKWGLLVQ >gi|316918777|gb|ADCU01000014.1| GENE 78 91031 - 91801 197 256 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 3 217 82 274 285 80 30 4e-14 MLNIIYQDEHLVALNKPAGWLVHRSWLDRHETVFVMQTLRDQIGQHVFPVHRLDRPTSGV LLMALSSEVARMLSEQFEQREMNKTYHAVVRGYLEGEAVIDYALTPELDKIADKFSSPDK APQTAVTHYRSLATVEMPVAVGKYQTARYSLIELKPETGRKHQLRRHMAHLRHPIIGDTK HGDLRQNRAMSQHFACSGLMLHASELCLEHPITGEPLFLQAGLDDRWQRMMAHFGWEEYL PDLERVEFLVSYGQDE >gi|316918777|gb|ADCU01000014.1| GENE 79 91801 - 92133 338 110 aa, chain - ## HITS:1 COG:YPO1037 KEGG:ns NR:ns ## COG: YPO1037 COG3098 # Protein_GI_number: 16121337 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 107 1 108 110 96 51.0 9e-21 MSEYAKVRQHLLQIEQQLDSLNLSQECAPDAQAFESKEPFCVDTMAPEQWLQWILLPRMF ALLDSQSPLPRRFAIAPYFEVAFKERLQEVQPLIVLLQQLDDMLNQEDAN >gi|316918777|gb|ADCU01000014.1| GENE 80 92851 - 93402 399 183 aa, chain - ## HITS:1 COG:no KEGG:ETAE_0725 NR:ns ## KEGG: ETAE_0725 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 183 1 182 184 239 63.0 5e-62 MVHDVSAALAEFTHRFINVWQNETGDFPYSEALYGVASPCVVRTENEKVYWKALLATAPD GLNGISRALDIQLHKDIVPFFTSQYAGDMSATLDDLHLDLVQVWSEDDLQRLQENQIGHL VTQRRLKLSPTLFLATTDSELQLVSLCNLTGNVLLEQFGSKQREVLAESLSEFLSRLQPV IKK >gi|316918777|gb|ADCU01000014.1| GENE 81 93475 - 94320 706 281 aa, chain + ## HITS:1 COG:STM2968_2 KEGG:ns NR:ns ## COG: STM2968_2 COG0780 # Protein_GI_number: 16766273 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Salmonella typhimurium LT2 # 137 281 1 145 145 237 76.0 2e-62 MSYQDHKALSGLTLGKATEYRDQYDATLLQPVPRSMNREPLGLYPETLPFRGGDIWTLYE LSWLNAKGLPQVAIADVELDAFSHNLIESKSFKLYLNSFNQTRFADWNEVQTTLQRDLAH CAQGNVSVQLMSLDSVEGQAIASFDGECIDHQDIEITHYEFNAELLKNAANKQAIVEETL VSHLLKSNCLITHQPDWGSVMIQYRGPKIDREALLRYLVSFRHHNEFHEQCVERIFCDIQ RFCQPETLSVYARYTRRGGLDINPWRTNTPFVAPKGRLVRQ >gi|316918777|gb|ADCU01000014.1| GENE 82 94664 - 95998 1174 444 aa, chain + ## HITS:1 COG:STM2969 KEGG:ns NR:ns ## COG: STM2969 COG1611 # Protein_GI_number: 16766274 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Salmonella typhimurium LT2 # 1 442 11 452 454 785 84.0 0 MDLLSQLEVDMLKRTASSDLYRLFRNCSLAVLNSGAQTDNSTELLSRFESFDINVLQRER GVKLELVNPPEDAFVDGQIIRSLQANLFAVLRDILFVNGQMSSNGRYPHLDSKNPVHITN MVFSILRNARALHVGEEPNMIVCWGGHSINEIEYLYARKVGNQLGLRELNICTGCGPGAM EAPMKGAAVGHAQQRYRDSRFIGMTEPSIIAAEPPNPLVNELVIMPDIEKRLEAFVRFGH GIIIFPGGVGTAEELLYLLGILMNPENKDQVLPLILTGPKESEDYFRVLDEFIMSTLGET ARKHYTIIIDDPAEVARQMKRAMPKVKENRRQTGDFYSFNWSIKIAPDLQLPFEPTHANM ADLNLYPDQPPEQLAASLRRAFSGIVAGNVKEIGIAEIEKHGPFKIHGDAKMMQHMDHLL QGFVAQHRMKLPGTAYVPCYEIIK >gi|316918777|gb|ADCU01000014.1| GENE 83 96060 - 96812 504 250 aa, chain + ## HITS:1 COG:YPO1032 KEGG:ns NR:ns ## COG: YPO1032 COG0258 # Protein_GI_number: 16121332 # Func_class: L Replication, recombination and repair # Function: 5'-3' exonuclease (including N-terminal domain of PolI) # Organism: Yersinia pestis # 1 249 1 249 251 385 73.0 1e-107 MQIHLLIIDALNLIRRIHAVQGSPCVVACQHALQQLLAHSQPTHAVAVFDEDDRDNSWRH QALPDYKAGRSAMPENLATEMPAIREAFAKLGVQSWHSAGNEADDLAATLAHKIALTGHQ VTIVSTDKGYCQLLAPTIQIRDYFQKRWLDLPFVKKEFGVEPEQLTDYWGLAGISSSKIS GIPGIGPKAAATLLNEFGSLSAIFEQIENVPSKWRKKLEEHREQAELCKKVATLQTNLTI SGNLQQLRLP >gi|316918777|gb|ADCU01000014.1| GENE 84 96910 - 98055 827 381 aa, chain - ## HITS:1 COG:YPO1031 KEGG:ns NR:ns ## COG: YPO1031 COG2933 # Protein_GI_number: 16121331 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Yersinia pestis # 2 367 3 367 368 646 81.0 0 MNKLALYCRPGFEKECAAEITEKAAALEVFGFPRVKENSGYVTFECYQHEDADKLAKNLP FRELIFARQMIVVGELLKDLPTDDRVSPIVGMLMNVVEGAGELRVEVPDTNESKELMKFC RKFTVPLRAALREQKILLKNENAHRPVVHVFFIAPGCCYVGYSYSNNNSPFYMGIPRLKF PSDAPSRSTLKLEEALHVFIPHDEWDERLAGGMKAVDLGACPGGWTYQLVKRSMWVHSVD NGPMAPSLMDTGQVTHHKADGFKFEPPHTNGVDWLVCDMVEKPAKVSNLMAHWLVNGWCR EAIFNLKLPMKKRYEEVSQNLAILAQTLKDNGINAQIAAKQLYHDREEITVHVRRIWGAI PGRRDERELNRRMQLKNSHNG >gi|316918777|gb|ADCU01000014.1| GENE 85 98048 - 98443 259 131 aa, chain - ## HITS:1 COG:STM2981 KEGG:ns NR:ns ## COG: STM2981 COG2363 # Protein_GI_number: 16766285 # Func_class: S Function unknown # Function: Uncharacterized small membrane protein # Organism: Salmonella typhimurium LT2 # 1 131 1 131 131 171 73.0 3e-43 MSSRSMMIFAAISGFVFVALGAFGAHVLSRTLGVAEMDWLHTGLQYQGIHTLAILGLAAL MQRRKNLWFYWSSALLALGTVLFCGSLYCLALSHLKLWVYITPIGGVCFLVGWALMLVGA LRMRKRAERHE >gi|316918777|gb|ADCU01000014.1| GENE 86 98501 - 99418 704 305 aa, chain - ## HITS:1 COG:YPO1029 KEGG:ns NR:ns ## COG: YPO1029 COG0583 # Protein_GI_number: 16121329 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 305 1 305 305 558 90.0 1e-159 MSKRLPPLNSLRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL LLTEEGQSYYLDIKEIFSSLNEATRKLQARSAKGALTVSLPPSFAIQWLVPRLSGFNTAY PGIDVRIQAVDREEGKLADDVDVAIFYGRGHWPGLRVERLYAEYLLPVCSPQLLLSEHPL KDPADMAYHTLLHDTSRRDWLAYTRQLGLQHINVQQGPIFSHSAMVVQAAVHGQGIALVN NVMAQTEIEAGRLVCPFNDVLISKNSFYLVCQDSQAELGKIAAFRQWILARAASEQEKFR FRYES >gi|316918777|gb|ADCU01000014.1| GENE 87 99804 - 100025 320 73 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_2919 NR:ns ## KEGG: ECIAI1_2919 # Name: ygdI # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 71 1 72 75 102 79.0 5e-21 MKKLGAVLSAVMFTFVLAGCSSNYVMHTNDGRTIVSDGKPQVDNETGMISYKDANGNQQQ INRNDVKEMTESN >gi|316918777|gb|ADCU01000014.1| GENE 88 100216 - 101448 905 410 aa, chain + ## HITS:1 COG:YPO1028 KEGG:ns NR:ns ## COG: YPO1028 COG0520 # Protein_GI_number: 16121328 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Yersinia pestis # 1 406 39 439 439 516 63.0 1e-146 MTSFDYLAFRGHFPSLATSDSQQHAVYLDSAATALKPQTLINASQDYYAGSAATVHRSQH QAALRLTQRYESARQYVAELLHAPSANDIVWTKGTTEAINLVAQSYLRPILRAGDEILVS EAEHHANLIPWLMVAEQCDANVIKLPVDAQGLPDLSLLPALLSPRTKLMALGQMSNVTGG CPDLAYALQLAHQNGTPVMIDGAQGVVHHPLNVSELDVDFYAFSAHKMYGPTGVGVLYGK TVYLEQMHAWQGGGKMLTKAGFEGFTEQRIPHRFEAGTPNIAGVIGFSAVLEWLQQFDLN AAETYSVALAEDAERQLRQITGFTSYRAPNSALLAFNIEGVHHSDLVTLVAEQGIALRAG QHCAQPLIQALGITGSLRASFAPYNRPEDVTALVKAVNYALSILNDEDLA >gi|316918777|gb|ADCU01000014.1| GENE 89 101445 - 101879 468 144 aa, chain + ## HITS:1 COG:YPO1027 KEGG:ns NR:ns ## COG: YPO1027 COG2166 # Protein_GI_number: 16121327 # Func_class: R General function prediction only # Function: SufE protein probably involved in Fe-S center assembly # Organism: Yersinia pestis # 1 143 2 144 147 178 59.0 3e-45 MIAPHSFGRILTPDMLIARFDALKLWEERYRQIILLARELPPLPPELKQQKTELAGCENQ VWLGGELLEDGTMHYYGDSDGRIVKGLLAILLTGAEGKTPQQIIDNDPLTLFQQLNILEQ LSSSRASGLNSLAAGIKSIAKNYL >gi|316918777|gb|ADCU01000014.1| GENE 90 101874 - 102686 685 270 aa, chain - ## HITS:1 COG:YPO1026 KEGG:ns NR:ns ## COG: YPO1026 COG1179 # Protein_GI_number: 16121326 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Yersinia pestis # 1 267 1 267 275 459 84.0 1e-129 MTASFSDAYLQRFSGIARLYGQHALGVFSQAHVCVIGIGGVGSWAAEALARTGIGAITLI DMDDVCVTNTNRQIHALRSNVGQAKTEVVAARIREINPECQVTCIDDFITPDNVDQLIDS RFSYVIDAIDSVRPKAALLAYCRRFKIPIVTTGGAGGQIDPTRIEVADLAKTIQDPLAAK LRERLKNDFNVVKNSKGKLGIDCVFSTEPLVYPQPDGSVCASRSTAEGPKRMDCASGFGS VTMVTATFGFVAVAHAIKKMLAKAEREAAL >gi|316918777|gb|ADCU01000014.1| GENE 91 102772 - 103887 996 371 aa, chain - ## HITS:1 COG:YPO1025 KEGG:ns NR:ns ## COG: YPO1025 COG2821 # Protein_GI_number: 16121325 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase # Organism: Yersinia pestis # 1 369 1 368 390 614 80.0 1e-176 MKGRWGQYVVGGLLVALLAGCSSRPTDKGQQYKDGKINDPLELVNRPNAKGKPVNGKDFS DQLTAIQRASPSLYNRNNDTFQAVTNWLRAGADTRQLSQFGLNAYQMEGMDNFGNVQFTG YYTPVIEARYTRQGEFQYPLYRMPSKGKNRRLPERSAIYSGALDNRNLEIGYSNSIMDNF MMEVQGSGYVDYGDGRPLTFFGYSGKNGHAYRSIGKVLIDRGEVAREEMSMQAIRKWADN HSAAEVRELLEQNPSFVFFKPEMYAPVKGASGVPLVAKASVASDRSLIPAGSTLLAEVPL LDNQGKFTGKYEMRLMVALDVGGAIKGQHFDIYQGIGPEAGHAAGFYNHYGRVWVLKTPQ SGGPLFSAYNR >gi|316918777|gb|ADCU01000014.1| GENE 92 104601 - 105851 982 416 aa, chain - ## HITS:1 COG:YPO1023 KEGG:ns NR:ns ## COG: YPO1023 COG0860 # Protein_GI_number: 16121324 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Yersinia pestis # 1 415 1 415 416 675 82.0 0 MTNSNHNLTRRRLLQGAAATWFLSVSRVGFAASAQVIAVRVWPSSTYTRVTLESKIPLKY KQFALTNPNRIVVDIEGVHLNSVLKGISHQVQSGDPYLKTARVGQFDKNTVRLVLELKQE ISPKLFTLAPFAEFNNRLVVDLYPAKGSAAEESDPLLALLEDYNKGDLGKSLPPEGPQKG KAGRDRPIVIMLDPGHGGEDPGAIGKNKTREKDIVLKIARRLSALIKKQPNMRVYMTRNE DVFIPLKVRVAKARKQRADLFISIHADAFTSRSVRGSSVFALSTKGATSAAAKFLAQTQN ESDEIGGVSRSGDQYLDHTIFDLMQTATVNDSLKFGKEVLKNMGRVNKLHKNSVEQAGFA VLKAPDIPSILVETAFISNVEEERKLRTSAFQQQVAESILAGIKAYFANGGELARR >gi|316918777|gb|ADCU01000014.1| GENE 93 106085 - 107413 966 442 aa, chain + ## HITS:1 COG:YPO1022_1 KEGG:ns NR:ns ## COG: YPO1022_1 COG0548 # Protein_GI_number: 16121323 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Yersinia pestis # 1 290 1 290 290 528 90.0 1e-150 MKERSTELVQGFRHSVPYINTHRGKTFVIMLGGEAIEHENFANIVNDIGLLHSLGIRLVV VYGARPQIDSNLNEHHHEPVYHKHTRVTDSRTLELVKQAAGQLQLDITARLSMSLNNTPL QGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEEAIHRQLDNGAIVLMGPVAVSVT GESFNLTSEEVATQLAIKLKAEKLIGFCSSQGVIDEDGSIMSELLPNEAQTRIEKLEASG DYNSGTVRFLRGAVKACRSGVGRSHLISYQEDGALVQELFSRDGIGTQIVMESAEQIRRA NINDIGGILELIRPLEQQGILVRRSREQLEREIDQFTIIERDNLTIACAALYPFPEERIG EMACVAVHPDYRSSSRGEALLKRVAAQARQMGLEKLFVLTTRSIHWFQERGFTPAEVDVL PLQKQELYNYQRRSKILLADLS >gi|316918777|gb|ADCU01000014.1| GENE 94 107436 - 109292 1222 618 aa, chain - ## HITS:1 COG:YPO1021 KEGG:ns NR:ns ## COG: YPO1021 COG0507 # Protein_GI_number: 16121322 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Yersinia pestis # 2 614 1 646 652 638 57.0 0 MIFDLLQRMGEQNQLRSLDVQFARLMASQGQPHLALAAALVSQEVASGHVCLPLNQLRID ALVAQFPDFTDDLKTLFGDIDEMHWQALLLAEPEVSDGGYAAPLILQNQRLYLQRLWQDE GVVAQFFAASDLPPDESVSTLPPILSQLFPSTNPADEINWQQVAAAVAATRRVSVISGGP GTGKTTTVAKLLTALIRLHPRQKLRIQLAAPTGKAAARLTESLGAAIEALNLTPNERESI PQEAYTLHRLLGAQPNSIRLRYHRDNPLHLDVLVVDEASMVDLPMMSKLIAALPYGARLI LLGDRDQLASVEAGAVLGDLCRFAEFGFRPARAQELSTLCQSVIPEGTEAPDIAVRDSIC LLRKSYRFDANSGIGQLATAVNLGDTARARRCFDGQFSDIAWIPMTKDEDYSTLIQTCVD GYRSTLQLVANMADAADVLASFSRFRLLCALREGPFGQTGLNERIELALAKAKLIHKPTQ AHQRWYSGRPVMVTRNDSSLGLFNGDIGIALADSAGNIRVYFQLPDGSIKSVQPSRLPQT ETAYAMTVHKSQGSEFEHTLLALPADFSPIVTRELLYTAITRAKQQLTLFSRDKILLTAI RTPTLRRSGLMERMMQPA >gi|316918777|gb|ADCU01000014.1| GENE 95 109289 - 112864 2615 1191 aa, chain - ## HITS:1 COG:YPO1020 KEGG:ns NR:ns ## COG: YPO1020 COG1074 # Protein_GI_number: 16121321 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Yersinia pestis # 2 1182 4 1193 1220 1561 68.0 0 MTQAQTLDALALPLIGERLIEASAGTGKTFTIAALYLRLLLGLGGENAFPRPLSVEEILV VTFTEAATEELRGRIRSNIHELRLACVRGSSTNPLLSDLLNLIDDKEDAVSQLLAAERQM DEAAIYTIHGFCQRMLSNNAFESGILFQQTLVQDELPLRRQACADFWRRHCYPLPLSIAT AISQEWSGPEQLLADLQPYLHGELPMLRQAIADDETLTQRHQQIIERIDAVKAHWREVAG EIESLIVDSGVDKRSYSSRFLPKWLTTVGDWATSETRDYQLPDELKRFGQNLLLEKTKKG TPPQHALFVAIDQLLAEPLSLRDLLLSRALSEVRTSVQQEKRQHAQLGFDDLLSRLSQAL NQSGGDVLAQAIRQRYPVAMIDEFQDTDPQQYGIFQAIYLQPQSDKQSDSALLLIGDPKQ AIYAFRGADIFTYMYARSEVKHHYTLGTNWRSSPGMVSAVNQVFSAVESPFLFADIPFLP VSAAKKNQALRFEIAGDIQKAMHIWLQPGEGCGTVEYQQSLAAQCAAQIRDWLTAGQQGK ALLYTDKKDSLGREIAKPVEASDITILVRSRAEAALVRDALSALAIPSVYLSNRDNVFQT PEARDLLWLLQAVLAPEQERLLRSALATSLMGLNSQQLNELNQDERLWDALVDEFDAYRQ QWQKQGVLPMLREIMGRRHLAENLLASEGGERRLTDVLHIGELLQEASLTLDSEPALLRW LAQQIDSPEVQSENQQLRLESDRHLVQVVTIHKSKGLEFPIVWLPFIGSYRLQKQPLYHD RDSFNAVLDLNYSDDAVKLAEEERLAEDLRLLYVALTRSVYHCSLGLAPLFLGGRKKQGE TDVHNSAIGHLLQKGEPGDAAMLLACLERLQNDDILVTTVEAQDGSPWVATAQEAQELQA KLFTRKMQDDWRVTSYSGLQQHGSSQFLDLLPKLDVDAVGESEVESIPALTPHTFPKGAA PGTFLHSLLEPMDFTQPRDITGLTEQVTQQGLNTEWVPVLDSWLDAILRAPLAESGPCLA QLAPSQVQAELQFYLPIEQLVRSAELDALIKRYDPLSAQCAPLDFRQVRGMLKGFIDLVF FWQGRFYVLDYKSNWLGEDASAYTQEAMVAAMAEHRYDFQYQLYSLALHRYLRHRLPNYQ YEQHFGGVFYCFLRGMTPAQPGQGIFHCRPDAALIEGMDRLFGYIPEGEAQ >gi|316918777|gb|ADCU01000014.1| GENE 96 112864 - 115770 2457 968 aa, chain - ## HITS:1 COG:YPO1019 KEGG:ns NR:ns ## COG: YPO1019 COG1025 # Protein_GI_number: 16121320 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Secreted/periplasmic Zn-dependent peptidases, insulinase-like # Organism: Yersinia pestis # 26 966 21 959 962 1353 70.0 0 MRRQFSFLTVMVLLLISTSLLWSTASTAKADPAGWEALAEKIDKSASDPRLYEAIKLDNG MKVILVSDKDAPKSLAALALPVGSLEDPNSQLGLAHYLEHMVLMGSKRYPQADNLSEFLK KHGGSHNASTASYRTAFYLEVENDALSPAVDRLADAIAEPLLDPVNADRERNAVNAELTM ARSRDGMRMAQVSAETLNPAHPSARFSGGNLETLSDKPNSKLHQELLSFYHRYYSANLMV GVIYSNQPLSSLAKLAVTSFGRIPNRDASVPPITVPVVTPEQQGIIIHYVPAQPRKMLKI EYRIENNSAAFRSKTDTYIAYLIGNRSKNTLSDWLQKQGLAESIGAGADPMVDRNGGVFS ISVSLTDKGLAERDRVIAAVYDYLKLLREQGVKQSYFDEIAHVLDLDFRYPSITRDMDYI EWLVDNMLRVPVQNVLDSSYLADKYDPQAITARLSSMTPENARIWFISPDEPHNKTAYFV DAPYQVDRITAKQFADWNNLEQRISLSLPALNPYIPDDFSLIKPVSPTLTKPEIVLDQPG LRALYMPSRYFADEPKANITLSLRNKVGSDGAKEQVMFALTDYLAGIELDQLAYQASIGG IGFSTTYNDGLTISASGFTQRLPQLLTTLVEGYANFDATEEHLEQAKSWYRERLDSAEKA KAFEQAMQPIQALSNVPYTERSERRALLDKITLSDIKNYRSQLIEGATPELLVVGNMTAI QVKALAQNIRTQLKCGGTLWWHGQDVVIEHKQLANLQRAGSSTDSALGAVYIPTGYDEVQ GMAHSNLLSQIIQPWFYDQLRTKEQLGYAVFAFPSSIGNQWGIGFLLQSNNQAPAYLYNR YLDFYAQADKRLKSLKEADFNQYKLALVNQLRQRPQTLDEEAGRFTNDFDRGNFEFNTRE KLIKQIDVLNRENIVTFYRQAVIKPQGMALLSQVLGGHAKGHYAAPKGWKTYANASTLQQ TLPVKVAP >gi|316918777|gb|ADCU01000014.1| GENE 97 115915 - 119316 2230 1133 aa, chain - ## HITS:1 COG:YPO1018 KEGG:ns NR:ns ## COG: YPO1018 COG1330 # Protein_GI_number: 16121319 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Yersinia pestis # 11 1131 1 1121 1123 1601 70.0 0 MCIACIVGERMFTVYHSNQLDLLKQLIAALIEGQPLQNPFEQEVILVQSPGMAQWLQMEL AKQFGIAANIEFPLPATFIWNLFTQVMPGIPKESAFSKDAMTWKLMWLLPKMLEQEAFLP LARYLSDDEDRRKHFQLAARVADLYDQYLVYRPEWLQIWERGEYVDGLDESQQWQAPLWV ALKEYTAELKQPEWHRANLYEKFIQTLEQATACPQGLPKRVFICGIAALPPIYLDALKAL GKHIDVHLMFTNPCRYYWGDIQDYAFLAKLQSRKRRHHIQRQQEISLFRDPQSASELFKP DGEQDLSNPLLASWGKLGRDHMYLLAQREPQEVHAFVDLTEDTLLTRIQRDLLELEDHSQ IVDSPERLNSSSGKRLLERGDRSISVNLCHSPQREVEVLHDRLLDLFAEDPSLTPRDVIV MVADIDSYTPFIQAVFGNAPRERYLPFAISDRSARQAHPVIQAFLTLLELPNSRFTSEHV LTLLEVPALAAHFGISEEGLRRLRHWVDESGIRWGLDDDNVRALDLPATGQHTWQFGLTR MLLGYAMDSRCGDWNGVLPYDESSGLIAELAGQLADLLMRLSVWRTRLSGEYRVQEWQPL CREILNEFFEQDSETEAVQALIEQQWLKVIGYGISAEYPQAIPISILRDELTSRLDNERI SQRFLAGPINFCTLMPMRSIPFKVVCLLGMNDGIYPRTIAPLGFDLMANKVQRGDRSRRD DDRYLFLEALLSAQERLYISYIGRSIQDNAPRYPSVLVSELMEYIAQSHHLPGDETLDVD SSAKRVMEYLQIQHPRVPFASENYAVGSESQSYASEWLPAARRSGEAHQEFALALPLEEF STITLDELIRFYRHPVRAFFQMRLGVNFVLEETELPDEEPFTLDNLSRYQLNSQLLNQLI DGDEAETLFRRFRSAGGLPYGAFGELYWEKQQEEMSEVAAKVREHRQAGHSIEIDYMLGG VRLTGWLQQVQDNGLVRWRPAILGAVDGMALWIEHLFYCFSGGEGESRCFGRQNSAWHFA PLSPKDAEKALLPLIEGYRQGRSCPLLLLPKTGWAWLSACFDKDSGMVDWDEQTQSKAQM KLLLAWQGDQRVIGEGSDPYIQRVMRTMDEKKMREVQQWTEQYYLPIARNNLD >gi|316918777|gb|ADCU01000014.1| GENE 98 119385 - 119756 197 123 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLATTEQKTHSQSGFGLIEVMVSILLVSVGFLGLLNYQQWMARSQVRLWQQQQAWQRSEQ AITLYRMGASNAEIPALLALPNTWSIVVTARSQFECEIISASIRAPLNIQAQLERTICSQ LME >gi|316918777|gb|ADCU01000014.1| GENE 99 119750 - 120157 133 135 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLPSVLMMLSLSLLIVGAQQGRIEHQVQILAYQRQLMTVRQQVESTLSQVIATHEWPKP RVASCQRFSSVTVCFKSITAELGIVCAVIQTKTYAAQIRRFSYVNSRVTPQGTTRLLRLS TGWLDYSPLGFESLC >gi|316918777|gb|ADCU01000014.1| GENE 100 120196 - 120777 184 193 aa, chain - ## HITS:1 COG:YPO1015 KEGG:ns NR:ns ## COG: YPO1015 COG4795 # Protein_GI_number: 16121316 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulJ # Organism: Yersinia pestis # 8 157 21 170 202 117 39.0 1e-26 MQLNPQKGMALPDVLVTLLLSSIVLLSTSQILVMLRAGNIKAQRWQQIQESIAQLLDRID KDLTRSGFCAQGCSVPQPMIASTGGESANSCLIVFYDLDTNGRIDLSSAATADSFGYRLR NGALETARGIQQCSGNGWDKITDEKEIKVSLFNVAPLYRGYEVQLALQRLKPPFTAIQQT RYILPENAQMVEK >gi|316918777|gb|ADCU01000014.1| GENE 101 120768 - 121226 354 152 aa, chain - ## HITS:1 COG:STM3000 KEGG:ns NR:ns ## COG: STM3000 COG2165 # Protein_GI_number: 16766302 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Salmonella typhimurium LT2 # 5 141 3 149 156 67 30.0 1e-11 MEWSRMSGFTLLEMMVVMLLVSSMAAYGLHGFKQQRMALQLEQTSLQLLAFLQQIQQRAF AENGTAQIVVDASQRSVSVQNTARRFTPSTPDIAIASQMSKSAGFYGIRNNAMAGHIELS SEAGTVSAIWSAQGRLRLCAQPKRLLGIPSCS >gi|316918777|gb|ADCU01000014.1| GENE 102 121473 - 122267 756 264 aa, chain - ## HITS:1 COG:YPO0783 KEGG:ns NR:ns ## COG: YPO0783 COG0207 # Protein_GI_number: 16121095 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Yersinia pestis # 1 264 1 264 264 521 90.0 1e-148 MKQYLDLMKKVLAEGTQKADRTGTGTVSIFGHQMRFNLQEGFPLVTTKRCHLRSIIHELL WFLNGDTNTAYLRENNVTIWDEWADENGDLGPVYGKQWRAWGAADGRQIDQISKVMEQLK QDPDSRRIIVSAWNVGELDQMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIAS YALLVHMMAQQLDLDVGDFVWTGGDTHLYSNHMEQTQLQLSREPRALPKLVIKRKPESIF DYRFEDFEIEGYDPHPGIKAPVAI >gi|316918777|gb|ADCU01000014.1| GENE 103 122335 - 123204 867 289 aa, chain - ## HITS:1 COG:YPO0784 KEGG:ns NR:ns ## COG: YPO0784 COG0682 # Protein_GI_number: 16121096 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Yersinia pestis # 3 286 4 288 290 478 85.0 1e-135 MTNYLHFPSFDPVIFSIGPVSLHWYGLMYLVGFVFAMWLAVRRANKPGSGWTKDEVENLL YVGFLGVFLGGRIGYVLFYNFPLFLENPLYLFKVWDGGMSFHGGLIGVIVVMLVFAYRTK RNFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVTTDTPWAMLFPSSRSEDIPLAASNP QWQEILNQYGVLPRHPSQLYELLLEGVVLFIILNLFIRKPRPMGSVSGLFLIGYGAFRII VEFFRQPDAQLGLFDGVISMGQILSIPMIIAGVIMMIWAYRRQPQQKTL >gi|316918777|gb|ADCU01000014.1| GENE 104 123540 - 123932 418 130 aa, chain - ## HITS:1 COG:no KEGG:Spro_3438 NR:ns ## KEGG: Spro_3438 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 42 130 65 158 158 73 56.0 2e-12 MANVSITMAVPAAGKSPALTGSGESVGSGSGKTVGASTAGGGSGRIQQLTKQIQELQQQL RDLANSGGSPEEIKKQQELIQAQIKALQAEIARIRQQEMEQTQQNQLDKVGKTGDGVNRP TDENQIDVYI >gi|316918777|gb|ADCU01000014.1| GENE 105 124152 - 124478 261 108 aa, chain - ## HITS:1 COG:no KEGG:ETAE_0700 NR:ns ## KEGG: ETAE_0700 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 108 33 140 140 147 75.0 2e-34 MLINAANIPADKKTSLDKEEPSYAFAGGVLGFSFYWLAFVLPFIVYGMNTPFFLLYTWPF FLALMPISVLLGIGINKLVSGRLLISVPLCAVLVVMLFWQTFSLLTGW >gi|316918777|gb|ADCU01000014.1| GENE 106 124537 - 125178 467 213 aa, chain - ## HITS:1 COG:YPO3364 KEGG:ns NR:ns ## COG: YPO3364 COG0529 # Protein_GI_number: 16123514 # Func_class: P Inorganic ion transport and metabolism # Function: Adenylylsulfate kinase and related kinases # Organism: Yersinia pestis # 12 212 12 212 213 313 75.0 2e-85 MTDINLLQQATESNAANPDIVWHEHAVRREDREKLHGHQGAVLWFTGLSGSGKSSIAGAL EQALHHIGVSTYLLDGDNVRHGLSRDLGFSDGDRVENIRRVGEVAKLMQDAGLIVLSAFI SPHRHERQLVRELLPEGRFIEVFVDTPLAVCEQRDPKGLYKKARAGEIKNFTGISSAYEA PEQPEVHLNGEQLVTNLVAQMLDVLRHNAIIKP >gi|316918777|gb|ADCU01000014.1| GENE 107 125196 - 126635 1486 479 aa, chain - ## HITS:1 COG:YPO3365 KEGG:ns NR:ns ## COG: YPO3365 COG2895 # Protein_GI_number: 16123515 # Func_class: P Inorganic ion transport and metabolism # Function: GTPases - Sulfate adenylate transferase subunit 1 # Organism: Yersinia pestis # 6 479 5 478 478 771 82.0 0 MSQIINHSIADQIAEQGGVEAYLQLQQDKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYE DQLTTLHSDSKRIGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPG HEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFIATLLGIRHLVVAVNKMDLRDYQ QDVFEQIKQDYLSFAEQLPADLEIKFVPLSALDGDNVASQSTAMGWYHGPTLLEILESVD VVHDAETQPLRFPVQYVNRPNLDFRGYAGTLSAGVISVGQAVKVLPSGVSSRVARIVTFD GDLQKAVPGEAITLVLEDEIDISRGDLIVAAEESIPAAQGASVDVVWMSEQPLSQGQSFD IKLGGKKTRARIERIHYQVEINTLTQRAVESLPLNGIGLVELTFDEPLVIDSYAQNHDTG SFIFIDRLTNVTVGAGLIREALTQQPLESDAYSAFELELNALVRRHFPHWGARDLLGGK >gi|316918777|gb|ADCU01000014.1| GENE 108 126673 - 127581 840 302 aa, chain - ## HITS:1 COG:cysD KEGG:ns NR:ns ## COG: cysD COG0175 # Protein_GI_number: 16130659 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Escherichia coli K12 # 1 302 1 302 302 599 94.0 1e-171 MDNQRLTHLRQLEAESIHIIREVAAEFSNPVMMYSIGKDSSVMLHLARKAFYPGTLPFPL LHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGISPFVHGSAKHTDIMKTEGLK QALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQVNKGES IRVFPLSNWTELDIWQYIYLENIDIVPLYLAKPRPVLERDGMLMMVDDDRIDLQPGEVIK QRMVRFRTLGCWPLTGAVESQAQTLPEIIEEMLISTTSERQGRMIDRDQSGSMELKKRQG YF >gi|316918777|gb|ADCU01000014.1| GENE 109 127994 - 129034 789 346 aa, chain + ## HITS:1 COG:iap KEGG:ns NR:ns ## COG: iap COG2234 # Protein_GI_number: 16130660 # Func_class: R General function prediction only # Function: Predicted aminopeptidases # Organism: Escherichia coli K12 # 1 346 1 343 345 398 56.0 1e-111 MFSCRSLKLVCAALCLSSSFTVSAAGVTHQPVGKIAEQEVRHIATYFPGRMAGSPAELMM ADYVNQRFQTMGYQSDLRDFKTRYIYTSNEGKKDWHNVNATSVIAVKPGTTDKQVLIVAH LDTYTPLSDDDVNHNLGGLTLQGVDDNASGVGVMLELAERLRNVKTKATVRFLALSAEEL GNKGAENYLSRMSQTDKANTLLVINLDSLITGDKLYFHSGVNTPKAVAEKTRDRALKLAK RLGIHAAINNGHSEHYPQGNGCCSAQMPFDAAKIPVLTVEASNGSLSKKEGYQQTNKTAQ FPAGTSWHQPQYDNLQYLDKNLPGRIKARSRDSVKILLPLVQEIAK >gi|316918777|gb|ADCU01000014.1| GENE 110 129298 - 130071 767 257 aa, chain + ## HITS:1 COG:BU181 KEGG:ns NR:ns ## COG: BU181 COG3416 # Protein_GI_number: 15616800 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Buchnera sp. APS # 8 182 5 174 238 97 34.0 3e-20 MSEQQSVEQGVISDLFSRIQQAEAGSGPRDAEAERLIQECIAKQPAAPYYMAQAMLVQEA AIKRLNDQVNALQQQVTQLQSQPRQSSGGFLAGLFGGGSETRPTSAPNSGSQPIPGAANY ANSNYANNNSANSGYANNGYAAAPSRRSGFLSGALQTAAGVAGGVVIADMLTGMFRNSQP EEIVNVVEDNNMVQPDSAQPDLTQADNAQPDNTQPDLQNADWQDDTSNQNGQDSGFFDSG FGSDDDSDNNNDDDSFF >gi|316918777|gb|ADCU01000014.1| GENE 111 130139 - 132157 1781 672 aa, chain - ## HITS:1 COG:YPO3390 KEGG:ns NR:ns ## COG: YPO3390 COG0609 # Protein_GI_number: 16123539 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Yersinia pestis # 25 672 19 665 665 666 66.0 0 MNARVNHSQRKNAQHRILLWLIPLLLALPALALTLFNFHHQLPVNQWWQAMTTPDINNIQ QVVMHYSILPRGVVSLLVGAGLGLAGLLFQQVLKNPLAEPATLGVSAGAQFGVTAAILLA VAPGSWMMQVAALLGAVLVALIVFGLSWGKRMSPVTLILAGLVMGLYCGALNSLMALFNY ESLQGMFVWASGALNQHDWHNVTDLAPRLLVAFILSALLIRPLTLLGLDDGVAKNLGLGL SSARLVTLALAVLISAQMVNAVGVIGFIGLFSPLLARICGARRLSQRLVMAPLIGALLLW LTDQVVQWLAVVWHEIPTGSATALIGAPVLLWLLPKLRTRGNVPDMNQSDQVAPERHHLW RWMIVGMVLLALALLIALLFGRGSEGWYWAQGIQIEEMMPWRWPRVIAALAAGMMLAVAG TMIQKLTGNPMASPEVLGITSGAALGVLVLLLLVPGNAFVWLLPAGSLGAALTLLLVMIT SSRNGFSAQRMLLAGIAVSTVFSTLVVMVLASGDPRTGMLLTWLAGSTYGVDGAQALRTA GVAAVLIAVTPLCRRWLMLLPLGSVTAKAVGVALMPSRITILLIASALTAAATLMTGPLS FVGLMAPHMARMLGFKRAMPQLMIAALIGGFLMMFADWCGRMVMFPYQIPAGLLATFIGA PYFIFLLRKQAR >gi|316918777|gb|ADCU01000014.1| GENE 112 132154 - 133071 746 305 aa, chain - ## HITS:1 COG:YPO3391 KEGG:ns NR:ns ## COG: YPO3391 COG0614 # Protein_GI_number: 16123540 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Yersinia pestis # 41 302 40 300 303 296 57.0 3e-80 MSRFNFPDLGRRRFVMALTLSPLLLPLAAHASLNSKTEFPDLNRIVALEWLPIELLMTLG ITPFAVAEIANYRLWVQEPQLAPSVLDLGNRTEPNMELLQQIAPSLILYSEGFGPSVPKM QTIAPTMGFSFNDGSGTPLKLAKQSLQNLAARLGIPERATAHLAQFQQRLAQSKQRLRPW DKTPLLLFTLLDADHALVFGKGSMFQEVMDELGLKNAWTGETNFWGSAIVGIEQLATVSP QSQAIFFSHGNDALFAQVQQTPLWQALPFVRARKVISQPGVWFYGATLSAMRFCDLLESA LGAKS >gi|316918777|gb|ADCU01000014.1| GENE 113 133098 - 133895 212 265 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 26 235 16 226 245 86 28 7e-16 MSKTAISTPSTFALQQVSFTVPGRTLLQNVSLTFPQGQVCGLIGHNGSGKSTLLKMLGRH QYPSEGQILLGNKPLADWDSKAFAREVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRF RSEDRERVEEAIALVDLKPLAGRLVDSLSGGERQRAWLAMTVAQNSRCLLLDEPTSALDI AHQVEVLALIQRLSRERGLTVIAVLHDINMAARYCDYLMALRSGELIAQGTPDQIMQGEV LEKIYGIPMGTLPHPSGGAPVSFVF >gi|316918777|gb|ADCU01000014.1| GENE 114 133973 - 136024 535 683 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145633184|ref|ZP_01788915.1| putative hydroxamate-type ferrisiderophore receptor [Haemophilus influenzae 3655] # 30 660 57 709 737 210 26 3e-53 MVVTAGGGVEQESAWGPSPTIAAKRSATGTKTDTALVKTPQSVSVVTREQLDTQQPASVK EALSFTPGVMVGSRGSSNVYDAVYIRGFGSVNQNEYLDGLKLQGDYFNEASIDPYFLERV EVLRGPSSVLYGKSSPGGIVSLVSKRPTTEPLREVQFKMGSNSLFETGFDFSDALDDNGE YAFRLTGLASDANDQQEMAKVKRYAIAPSFSWQPNEHTNLTIMSYIQNDPNMGYYGWLPK EGTVQKASFGRLSPDFNEGESSNFYSRQTRMVGYSFTHDFDDTWTVRQNLRYMQLHTNQN NVYGVGVDATNDTVLNRNYILSNERLNNFTVDTQGQAKFGTGDVDHTLLMGVDYMNMRND IVGGWGTTTPLNLANPQYGNDNRSPLNPTSKVDGQEQVGIYLQEQAEWNQWILTAGTRYD WAKSTVEDRVANTYGKQNDHQSTSRIGLNYLFNNGISPYISYAQSFEPNIGAGYDKKMFS PSKGEQYEAGVKYIPEDRPVSATLALYQLTKSNNLVTDTEHADKGWYQQQTGEIRSRGVE FEGKAALTTNINLLASYTYTDAEYTKDTTNQGNTPAIIPKHMASLWGDYTFHETALSGLS AGAGVRYVGSTWGDEANTFKVPDYTIWNAMIKYDLARFNLPGSSVGLNVNNLFDKEYVSS CFATNGCFWGAERQIVATATFRF >gi|316918777|gb|ADCU01000014.1| GENE 115 136851 - 137990 1145 379 aa, chain + ## HITS:1 COG:YPO1411 KEGG:ns NR:ns ## COG: YPO1411 COG3203 # Protein_GI_number: 16121691 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Yersinia pestis # 1 379 2 360 360 424 65.0 1e-118 MKRKILAVVIPSLLLAGMANATEIYNKDGNKLDLEAKVDARHQFSENKGDDGDETYLRVG FRGETQISDQLTGFGQWEYNVQANHTEGGSTGGTSGNATRLGFAGLKFGDYGSFDYGRNY GVVYDVEAWTDMLPVFGGDSYTQTDTFMNTRGNGMATYRNSDFFGLVEGWNFALQYQGAN DNGGAEGNNGTNNGERKISTQNGDGFGVSTTYDTGMGLNFGASFATSNRTHDQEFDSTAG GHTADVWTIGAKYDANNVYLAAMYAQTQNMTAFGDTDGYIANKTQNVELTAQYQFDFGLR PSLGYVYSKGKDLGSIAGDGRHDNKNLVNYIEVGTYYYFNKNMSTYIDYKINLMNDNDFT RAAGITTDDVVGVGLVYQF Prediction of potential genes in microbial genomes Time: Wed May 18 15:21:52 2011 Seq name: gi|316918626|gb|ADCU01000015.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.15, whole genome shotgun sequence Length of sequence - 190193 bp Number of predicted genes - 154, with homology - 145 Number of transcription units - 83, operones - 31 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 45 - 2624 2188 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 2 2 Tu 1 . - CDS 2731 - 5205 1840 ## COG1643 HrpA-like helicases - Prom 5428 - 5487 5.0 + Prom 5175 - 5234 4.1 3 3 Op 1 3/0.333 + CDS 5259 - 5819 241 ## COG1514 2'-5' RNA ligase 4 3 Op 2 6/0.067 + CDS 5857 - 6564 473 ## COG1489 DNA-binding protein, stimulates sugar fermentation + Prom 6615 - 6674 2.2 5 4 Tu 1 . + CDS 6757 - 7212 505 ## COG1734 DnaK suppressor protein + Term 7270 - 7320 -0.4 6 5 Tu 1 1/0.700 + CDS 7360 - 8235 622 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Prom 8252 - 8311 2.8 7 6 Op 1 7/0.000 + CDS 8468 - 9781 1371 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 8 6 Op 2 4/0.300 + CDS 9772 - 10257 230 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 + Prom 10280 - 10339 6.1 9 7 Op 1 19/0.000 + CDS 10478 - 11272 832 ## COG0413 Ketopantoate hydroxymethyltransferase 10 7 Op 2 12/0.000 + CDS 11339 - 12199 871 ## COG0414 Panthothenate synthetase + Prom 12207 - 12266 6.3 11 7 Op 3 . + CDS 12328 - 12708 341 ## COG0853 Aspartate 1-decarboxylase + Term 12744 - 12785 3.3 - Term 12726 - 12774 6.4 12 8 Tu 1 . - CDS 12776 - 14107 861 ## COG0726 Predicted xylanase/chitin deacetylase - Prom 14321 - 14380 5.8 - Term 14276 - 14312 -0.5 13 9 Tu 1 . - CDS 14403 - 16025 1382 ## COG2132 Putative multicopper oxidases - Prom 16239 - 16298 7.1 + Prom 16147 - 16206 3.9 14 10 Tu 1 . + CDS 16287 - 16634 378 ## ETAE_0669 hypothetical protein + Term 16662 - 16693 2.1 - Term 16648 - 16680 3.1 15 11 Op 1 . - CDS 16726 - 17091 403 ## COG3112 Uncharacterized protein conserved in bacteria 16 11 Op 2 . - CDS 17144 - 17362 74 ## 17 11 Op 3 . - CDS 17424 - 18089 753 ## COG2979 Uncharacterized protein conserved in bacteria - Prom 18287 - 18346 8.2 + Prom 18543 - 18602 4.8 18 12 Tu 1 . + CDS 18735 - 20204 838 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain + Term 20262 - 20294 -0.1 19 13 Tu 1 . - CDS 20621 - 23218 2599 ## COG1049 Aconitase B + Prom 23523 - 23582 4.1 20 14 Tu 1 . + CDS 23635 - 23892 232 ## + Term 23991 - 24025 7.6 - Term 23977 - 24013 8.0 21 15 Tu 1 . - CDS 24046 - 25470 672 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 25633 - 25692 3.8 - Term 25737 - 25766 3.5 22 16 Op 1 13/0.000 - CDS 25775 - 27661 1988 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 23 16 Op 2 6/0.067 - CDS 27675 - 30338 2734 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component - Term 30449 - 30495 4.1 24 17 Tu 1 . - CDS 30499 - 31263 613 ## COG2186 Transcriptional regulators + Prom 32016 - 32075 4.5 25 18 Tu 1 . + CDS 32139 - 33536 1306 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 33555 - 33593 8.5 + Prom 33576 - 33635 2.7 26 19 Op 1 1/0.700 + CDS 33758 - 35161 1191 ## COG2211 Na+/melibiose symporter and related transporters 27 19 Op 2 . + CDS 35212 - 36162 1071 ## PROTEIN SUPPORTED gi|90020424|ref|YP_526251.1| ribosomal protein L11 methyltransferase + Term 36348 - 36376 0.6 28 20 Op 1 6/0.067 - CDS 36273 - 37127 756 ## COG3725 Membrane protein required for beta-lactamase induction 29 20 Op 2 . - CDS 37148 - 37705 493 ## COG3023 Negative regulator of beta-lactamase expression - Prom 37758 - 37817 4.4 + Prom 37727 - 37786 3.2 30 21 Tu 1 . + CDS 37848 - 38738 462 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 31 22 Tu 1 . - CDS 38691 - 38888 93 ## - Prom 39050 - 39109 4.5 + Prom 38740 - 38799 3.6 32 23 Op 1 8/0.000 + CDS 38904 - 39386 471 ## COG4969 Tfp pilus assembly protein, major pilin PilA 33 23 Op 2 24/0.000 + CDS 39383 - 40771 701 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 34 23 Op 3 . + CDS 40772 - 41965 653 ## COG1459 Type II secretory pathway, component PulF + Term 42067 - 42102 -0.7 - Term 41964 - 42007 4.0 35 24 Tu 1 . - CDS 42025 - 43071 1144 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 43156 - 43215 4.1 + Prom 43318 - 43377 3.4 36 25 Op 1 7/0.000 + CDS 43465 - 44088 523 ## COG0237 Dephospho-CoA kinase 37 25 Op 2 7/0.000 + CDS 44081 - 44833 648 ## COG4582 Uncharacterized protein conserved in bacteria 38 25 Op 3 . + CDS 44895 - 45092 179 ## COG3024 Uncharacterized protein conserved in bacteria + Term 45116 - 45157 1.2 - Term 45108 - 45140 1.9 39 26 Op 1 8/0.000 - CDS 45150 - 45545 269 ## PROTEIN SUPPORTED gi|42631237|ref|ZP_00156775.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 45568 - 45627 1.7 - Term 45580 - 45613 4.5 40 26 Op 2 . - CDS 45644 - 48352 3048 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 41 26 Op 3 . - CDS 48428 - 49018 378 ## YPTB0696 SecA regulator SecM - Prom 49096 - 49155 6.0 42 27 Op 1 11/0.000 - CDS 49209 - 50126 737 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase - Prom 50167 - 50226 1.5 43 27 Op 2 35/0.000 - CDS 50239 - 51399 1438 ## COG0206 Cell division GTPase 44 27 Op 3 25/0.000 - CDS 51470 - 52726 1088 ## COG0849 Actin-like ATPase involved in cell division 45 27 Op 4 18/0.000 - CDS 52723 - 53589 785 ## COG1589 Cell division septal protein 46 27 Op 5 11/0.000 - CDS 53591 - 54511 1022 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 47 27 Op 6 26/0.000 - CDS 54504 - 56006 1261 ## COG0773 UDP-N-acetylmuramate-alanine ligase 48 27 Op 7 31/0.000 - CDS 56097 - 57176 1059 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 49 27 Op 8 25/0.000 - CDS 57173 - 58411 1138 ## COG0772 Bacterial cell division membrane protein 50 27 Op 9 28/0.000 - CDS 58411 - 59727 1094 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 51 27 Op 10 28/0.000 - CDS 59729 - 60811 1041 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 52 27 Op 11 26/0.000 - CDS 60805 - 62181 1175 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 53 27 Op 12 26/0.000 - CDS 62178 - 63665 1276 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 54 27 Op 13 12/0.000 - CDS 63652 - 65415 1326 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 55 27 Op 14 12/0.000 - CDS 65475 - 65795 379 ## COG3116 Cell division protein 56 27 Op 15 29/0.000 - CDS 65792 - 66736 954 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 57 27 Op 16 . - CDS 66739 - 67197 474 ## COG2001 Uncharacterized protein conserved in bacteria - Prom 67360 - 67419 7.3 + Prom 67897 - 67956 4.7 58 28 Tu 1 . + CDS 68047 - 68526 479 ## EFER_0402 putative inner membrane protein - Term 68518 - 68550 5.0 59 29 Tu 1 . - CDS 68583 - 69587 811 ## COG1609 Transcriptional regulators - Prom 69661 - 69720 3.3 - Term 69725 - 69761 7.2 60 30 Op 1 32/0.000 - CDS 69796 - 70287 545 ## COG0440 Acetolactate synthase, small (regulatory) subunit 61 30 Op 2 1/0.700 - CDS 70290 - 72008 1403 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 72215 - 72274 3.3 - Term 72421 - 72454 6.1 62 31 Tu 1 . - CDS 72476 - 74278 1444 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) - Prom 74366 - 74425 5.1 - Term 74569 - 74610 8.6 63 32 Tu 1 . - CDS 74641 - 75594 664 ## COG0583 Transcriptional regulator + Prom 76276 - 76335 5.4 64 33 Op 1 11/0.000 + CDS 76368 - 77954 1394 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 65 33 Op 2 10/0.000 + CDS 77957 - 79048 1191 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 66 33 Op 3 30/0.000 + CDS 79051 - 80463 1434 ## COG0065 3-isopropylmalate dehydratase large subunit 67 33 Op 4 . + CDS 80478 - 81095 594 ## COG0066 3-isopropylmalate dehydratase small subunit - Term 81736 - 81791 6.5 68 34 Tu 1 . - CDS 81919 - 83391 1295 ## COG0471 Di- and tricarboxylate transporters - Term 83533 - 83578 7.2 69 35 Op 1 . - CDS 83585 - 84379 536 ## COG3541 Predicted nucleotidyltransferase 70 35 Op 2 . - CDS 84388 - 85524 1116 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs + Prom 85955 - 86014 8.2 71 36 Tu 1 . + CDS 86036 - 87613 1121 ## COG4650 Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain - Term 87369 - 87419 -0.2 72 37 Tu 1 . - CDS 87619 - 88800 1034 ## COG0477 Permeases of the major facilitator superfamily - Prom 88956 - 89015 2.6 + Prom 88928 - 88987 2.3 73 38 Tu 1 . + CDS 89026 - 90744 1275 ## COG4533 ABC-type uncharacterized transport system, periplasmic component + Prom 90846 - 90905 2.9 74 39 Op 1 14/0.000 + CDS 91099 - 92070 831 ## COG4143 ABC-type thiamine transport system, periplasmic component 75 39 Op 2 11/0.000 + CDS 92046 - 93650 1230 ## COG1178 ABC-type Fe3+ transport system, permease component 76 39 Op 3 . + CDS 93647 - 94342 208 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Prom 94408 - 94467 6.5 77 40 Tu 1 . + CDS 94544 - 95542 701 ## PSPTO_1342 hypothetical protein - Term 95573 - 95600 -0.8 78 41 Tu 1 . - CDS 95611 - 96378 650 ## COG0586 Uncharacterized membrane-associated protein - Prom 96478 - 96537 3.4 + Prom 97434 - 97493 2.6 79 42 Tu 1 . + CDS 97527 - 99881 1773 ## COG0417 DNA polymerase elongation subunit (family B) + Term 100046 - 100075 0.5 80 43 Tu 1 . - CDS 99822 - 99932 70 ## - Prom 100119 - 100178 1.8 + Prom 99949 - 100008 3.6 81 44 Op 1 7/0.000 + CDS 100112 - 103018 3401 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 82 44 Op 2 . + CDS 103018 - 103764 220 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family + Prom 103777 - 103836 2.4 83 45 Op 1 4/0.300 + CDS 103921 - 105072 1032 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 84 45 Op 2 . + CDS 105082 - 105870 383 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 85 45 Op 3 . + CDS 105860 - 106117 123 ## KPK_4859 hypothetical protein + Term 106128 - 106155 1.5 - Term 106107 - 106151 7.1 86 46 Tu 1 . - CDS 106159 - 106992 750 ## COG1076 DnaJ-domain-containing proteins 1 + Prom 106986 - 107045 4.5 87 47 Op 1 16/0.000 + CDS 107176 - 109554 2231 ## COG1452 Organic solvent tolerance protein OstA + Prom 109558 - 109617 3.7 88 47 Op 2 13/0.000 + CDS 109663 - 110961 1415 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 89 47 Op 3 12/0.000 + CDS 110951 - 111958 447 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 90 47 Op 4 8/0.000 + CDS 111951 - 112763 740 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 91 47 Op 5 8/0.000 + CDS 112840 - 113217 343 ## COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport 92 47 Op 6 . + CDS 113275 - 114108 665 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases + Term 114153 - 114186 1.0 + Prom 114648 - 114707 2.7 93 48 Op 1 . + CDS 114731 - 115273 221 ## COG3539 P pilus assembly protein, pilin FimA 94 48 Op 2 . + CDS 115294 - 115635 219 ## + Term 115872 - 115911 1.0 95 49 Tu 1 . - CDS 115729 - 116397 326 ## ECL_01130 putative DNA-binding transcriptional regulator - Prom 116575 - 116634 5.5 + Prom 116900 - 116959 4.8 96 50 Tu 1 . + CDS 117086 - 117433 98 ## + Prom 117925 - 117984 3.3 97 51 Op 1 7/0.000 + CDS 118023 - 118565 359 ## COG3539 P pilus assembly protein, pilin FimA + Prom 118574 - 118633 2.8 98 51 Op 2 10/0.000 + CDS 118699 - 119391 472 ## COG3121 P pilus assembly protein, chaperone PapD 99 51 Op 3 . + CDS 119439 - 122093 2057 ## COG3188 P pilus assembly protein, porin PapC 100 51 Op 4 . + CDS 122095 - 123099 456 ## 101 51 Op 5 . + CDS 123115 - 123639 402 ## COG3539 P pilus assembly protein, pilin FimA 102 51 Op 6 . + CDS 123711 - 124244 327 ## 103 51 Op 7 . + CDS 124264 - 124791 197 ## COG3539 P pilus assembly protein, pilin FimA + Term 124797 - 124836 5.9 + Prom 124884 - 124943 2.0 104 52 Tu 1 . + CDS 124963 - 125886 177 ## COG0583 Transcriptional regulator + Term 125912 - 125945 3.1 - Term 125900 - 125933 2.3 105 53 Tu 1 . - CDS 125958 - 126440 548 ## COG0262 Dihydrofolate reductase - Prom 126469 - 126528 3.6 106 54 Op 1 12/0.000 - CDS 126563 - 127114 370 ## COG3610 Uncharacterized conserved protein 107 54 Op 2 . - CDS 127027 - 127803 525 ## COG2966 Uncharacterized conserved protein - Prom 127823 - 127882 2.6 + Prom 127779 - 127838 2.9 108 55 Tu 1 . + CDS 127968 - 128582 533 ## COG1280 Putative threonine efflux protein - Term 128577 - 128621 9.0 109 56 Op 1 7/0.000 - CDS 128627 - 130513 1008 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 110 56 Op 2 . - CDS 130506 - 131078 329 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 131222 - 131281 5.5 - Term 131261 - 131290 -0.4 111 57 Op 1 24/0.000 - CDS 131311 - 134535 3515 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 112 57 Op 2 8/0.000 - CDS 134554 - 135636 921 ## COG0505 Carbamoylphosphate synthase small subunit - Prom 135715 - 135774 4.5 113 57 Op 3 . - CDS 136212 - 137033 903 ## COG0289 Dihydrodipicolinate reductase - Prom 137219 - 137278 5.8 + Prom 137437 - 137496 3.6 114 58 Op 1 12/0.000 + CDS 137547 - 139832 1821 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 115 58 Op 2 15/0.000 + CDS 139835 - 140713 717 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 116 58 Op 3 . + CDS 140710 - 141186 361 ## COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs - Term 141402 - 141445 -0.4 117 59 Tu 1 . - CDS 141446 - 142429 759 ## COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases - Term 142449 - 142480 3.2 118 60 Op 1 7/0.000 - CDS 142487 - 143434 434 ## PROTEIN SUPPORTED gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 119 60 Op 2 7/0.000 - CDS 143415 - 143885 259 ## PROTEIN SUPPORTED gi|90022209|ref|YP_528036.1| ribosomal protein S2 120 60 Op 3 16/0.000 - CDS 143891 - 144391 493 ## COG0597 Lipoprotein signal peptidase 121 60 Op 4 16/0.000 - CDS 144391 - 147192 2959 ## COG0060 Isoleucyl-tRNA synthetase 122 60 Op 5 . - CDS 147333 - 148271 405 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 - Prom 148294 - 148353 5.5 + Prom 148581 - 148640 3.9 123 61 Tu 1 . + CDS 148680 - 148943 403 ## PROTEIN SUPPORTED gi|22127576|ref|NP_670999.1| 30S ribosomal protein S20 + Term 148973 - 148998 -0.5 - Term 148962 - 149003 -0.5 124 62 Tu 1 . - CDS 149012 - 149914 876 ## COG0583 Transcriptional regulator - Term 150097 - 150138 9.5 125 63 Tu 1 . - CDS 150151 - 151332 1046 ## COG3004 Na+/H+ antiporter - Prom 151482 - 151541 5.5 - Term 151481 - 151528 6.2 126 64 Op 1 31/0.000 - CDS 151555 - 152682 1122 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain - Term 152697 - 152741 10.2 127 64 Op 2 . - CDS 152806 - 154716 2255 ## COG0443 Molecular chaperone + Prom 155152 - 155211 3.8 128 65 Tu 1 . + CDS 155231 - 155830 590 ## COG1584 Predicted membrane protein + Term 155881 - 155914 3.1 - Term 155862 - 155910 6.2 129 66 Op 1 4/0.300 - CDS 155916 - 157409 890 ## COG0477 Permeases of the major facilitator superfamily 130 66 Op 2 3/0.333 - CDS 157496 - 158395 1047 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 158504 - 158563 3.6 - Term 158515 - 158559 2.7 131 67 Tu 1 . - CDS 158582 - 159346 647 ## COG2186 Transcriptional regulators - Prom 159453 - 159512 3.9 - Term 159525 - 159561 6.4 132 68 Tu 1 . - CDS 159575 - 160909 1213 ## COG0477 Permeases of the major facilitator superfamily - Prom 161006 - 161065 5.7 133 69 Op 1 . - CDS 161075 - 161662 683 ## PROTEIN SUPPORTED gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 134 69 Op 2 . - CDS 161659 - 162315 529 ## COG0637 Predicted phosphatase/phosphohexomutase - Prom 162468 - 162527 3.9 135 70 Tu 1 . - CDS 163030 - 163710 768 ## COG1802 Transcriptional regulators - Prom 163737 - 163796 2.0 - Term 163774 - 163814 5.3 136 71 Tu 1 4/0.300 - CDS 163842 - 165242 980 ## COG1113 Gamma-aminobutyrate permease and related permeases 137 72 Op 1 12/0.000 - CDS 165384 - 166667 1159 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases 138 72 Op 2 3/0.333 - CDS 166785 - 168233 1349 ## COG1012 NAD-dependent aldehyde dehydrogenases 139 72 Op 3 . - CDS 168282 - 169541 955 ## COG0579 Predicted dehydrogenase 140 72 Op 4 . - CDS 169628 - 170605 797 ## KPN_00258 hypothetical protein - Prom 170748 - 170807 8.2 - Term 170863 - 170901 -0.0 141 73 Tu 1 . - CDS 171052 - 172005 1116 ## COG0176 Transaldolase - Prom 172146 - 172205 3.1 + Prom 172399 - 172458 6.5 142 74 Tu 1 . + CDS 172484 - 173917 848 ## PROTEIN SUPPORTED gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 + Prom 173949 - 174008 2.8 143 75 Tu 1 . + CDS 174047 - 174826 769 ## COG3022 Uncharacterized protein conserved in bacteria 144 76 Op 1 19/0.000 - CDS 174948 - 176237 1017 ## COG0498 Threonine synthase 145 76 Op 2 11/0.000 - CDS 176241 - 177170 724 ## COG0083 Homoserine kinase 146 76 Op 3 . - CDS 177172 - 179631 2221 ## COG0527 Aspartokinases - Term 179936 - 179976 2.0 147 77 Tu 1 . - CDS 180041 - 180727 269 ## COG0565 rRNA methylase - Prom 180828 - 180887 7.0 148 78 Tu 1 . - CDS 181056 - 181256 65 ## - Prom 181378 - 181437 3.1 149 79 Tu 1 . + CDS 181403 - 182119 913 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 182143 - 182184 6.1 - Term 182197 - 182238 3.4 150 80 Tu 1 . - CDS 182260 - 183375 1302 ## COG0566 rRNA methylases - Prom 183577 - 183636 3.5 + Prom 183499 - 183558 4.3 151 81 Tu 1 . + CDS 183646 - 184077 356 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 184099 - 184131 3.1 + Prom 184109 - 184168 2.8 152 82 Op 1 3/0.333 + CDS 184381 - 184902 461 ## COG3148 Uncharacterized conserved protein 153 82 Op 2 3/0.333 + CDS 184947 - 187622 1568 ## COG1042 Acyl-CoA synthetase (NDP forming) + Term 187696 - 187728 -0.9 + Prom 187651 - 187710 2.4 154 83 Tu 1 . + CDS 187755 - 189110 719 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes + Term 189120 - 189150 1.0 - 5S_RRNA 189474 - 189601 100.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. - LSU_RRNA 189705 - 190193 97.0 # EU285524 [D:3075..6064] # 23S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. Predicted protein(s) >gi|316918626|gb|ADCU01000015.1| GENE 1 45 - 2624 2188 859 aa, chain - ## HITS:1 COG:YPO3393 KEGG:ns NR:ns ## COG: YPO3393 COG0744 # Protein_GI_number: 16123542 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Yersinia pestis # 5 857 4 823 824 1289 78.0 0 MSRDDDREPIGRKSKKGGNPPSRRTASNRRRRYDDDDDDDYRDDFRRSSDYHDEDEYEEE DDDYEDDDREDDVARKKVKKPRKRRLLGLLIKLALIVFVLLAIYGFYLDQQIRARIDGKV WQLPATVYGRMVDLEPGMSYSKKEMVNLLEGMQYRQVSRITRPGEFSVNGDNIDLLRRPF DFPDGKEGQIHARLVFSNDRLSQIQNMDNQRQFGFFRLDPRLITMLQSPNGEQRLFVPRS GFPDLLVDTLIATEDRHFYEHDGISFYSIGRAVVANLTAGRAVQGGSTLTQQLVKNLFLS NERSLWRKINEAYMALIVDYRYSKDRILELYLNEVYLGQSGSDQIRGFPLASLYYFGRPV DELSLDQQALLVGMVKGASLYNPWRNPTLALERRNLVLKLLENQQVIDKELYDMLSARPL GVQPKGGVISPQPAFMQMVRQELQQKLGSKINDLSGVKIFTTLDPVSQDAAEKAVEDGIP ALKAARHVNDLEAAMVIVDRFSGEVRAMVGGAQPQFAGFNRAMDARRSVGSLAKPPTYLT ALSEPDKYRLNTWLADQPLSLKQPNGSIWQPKNYDRQYRGQVMLVDALANSLNVPTVNLG MSVGLDQISATLQRLGIPKDVINPVPSMLLGAISLTPMEVAQEYQTIAGGGNRAPLSAVR SVIAEDGTVLYQSLPQAQSVVPPQAAYLTLYGMQQVVARGTSRSLTAKFGNYHLAAKTGT TNDLRDSWFAGVDGKEVTIAWVGRDNNGPAKLTGANGALTLYRRYLENQTPLPLNLVPPE GITTMSIDGSGNFVCNSGGLRTLPVWTENPEGLCAASAAQQPATQSQQPQTEGQPSQQPQ EQKGSDGVAGWIKDMFGSN >gi|316918626|gb|ADCU01000015.1| GENE 2 2731 - 5205 1840 824 aa, chain - ## HITS:1 COG:YPO3394 KEGG:ns NR:ns ## COG: YPO3394 COG1643 # Protein_GI_number: 16123543 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Yersinia pestis # 11 824 8 826 828 1016 70.0 0 MLKHYTSYFGVFVSLLPVAAVLEPLLAALQSSARVLLNAPTGAGKSTWLPLQLLKADWLD GKIIMLEPRRLAARSVANRLAQQLGENVGQTVGYRMRADTKVSTQTRLEVVTEGILTRML QQDPELSGVSLVILDEFHERSLQADLALALLLDVQQGLRDDLRLLIMSATLDDVRLTKLL PDAPVIRSEGRSFPVVRRYTPVSAHERLEQSACNAVLNLLRQESGSLLLFLPGVGEIRRT AELLQSCVDDDTDLCPLYGALPLSEQQKAIDPSPAGRRKVVLATNIAETSLTIDGIRLVI DSTLERASLFDIRSGLTKLVTQRASQASMTQRAGRAGRLEPGICWHLMAAEQAERTAEYS EPEILHSDLSSLWLNLLQWGCTDVAQLQWLDTPPQAAISVAQRLLFQLGAVNEQGALSAT GRVMSDAGSDPRLAAMLCAAQQAGENALATAALLAAIIEEPPRGGNVDLRNALFHPQNHW QRRADQLCRRLGKGQGTVEPEEAAFWLAHAYPDRIANLRGQDGRYLLANGLGAAMEPDDA LARTPWMIVANLLQGVNNSEARILLALPCDIERLAPRLPHLISEQTSVEWDESKGTLRAW KRQQLGRLVLKAQPLAKPSAEELSQALLNWVRHQGISALNWSDSAQQLRLRLQCAAQWLP DVNWPAVDDDSLLDSLEDWLLPSLNGVRDLRGLQNINLTEALLSLMDWPTRQRLDSALPT HYTVPTGSHLPIQYFSDKPPVLAVRLQEVFGEQQSPKIAEGRVALVLELLSPARRPLQIT RDLAAFWQGSYREVQKEMKGRYPKHAWPDDPGNALPTRRTKRFQ >gi|316918626|gb|ADCU01000015.1| GENE 3 5259 - 5819 241 186 aa, chain + ## HITS:1 COG:YPO3395 KEGG:ns NR:ns ## COG: YPO3395 COG1514 # Protein_GI_number: 16123544 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 2'-5' RNA ligase # Organism: Yersinia pestis # 1 180 8 187 191 223 61.0 1e-58 MSDTRRLFFALPLPPKTQRALVKWRAEQFPPEAGRPIAAANLHITLAFLGEVSEQKSLAL QNMASRIKQPAFSLDLDDAGHWPGAGVVWLGSRRAPRGLLQLAELLRSQAARSGCYQSPF PFHPHVTLLRGATKTVAIPPSGFHWPVAFEHFALYSSEFRRGRTRYDQIACWPLITQTKR GSELSE >gi|316918626|gb|ADCU01000015.1| GENE 4 5857 - 6564 473 235 aa, chain + ## HITS:1 COG:YPO3396 KEGG:ns NR:ns ## COG: YPO3396 COG1489 # Protein_GI_number: 16123545 # Func_class: R General function prediction only # Function: DNA-binding protein, stimulates sugar fermentation # Organism: Yersinia pestis # 3 234 4 235 245 355 75.0 5e-98 MLFAPPLQSCRLIQRYKRFLADVQLTDGSEMTMHCANTGAMTGCATPGDTVWYSTSDNLK RKYAHSWELTQTQQGHWICVNTMRANTLVQEAIAAGRIKELSGYTKVRTEVRYGEENSRI DLLLQAENRPDCYIEVKSVTLLQQGCGYFPDAVTLRGQKHLRELAQQVQNGQRAVLFFAV LHTGIEKVAPAQHIDPQYAELLAQACALGVEVICYGAQINAEGIELNNPLPFGLY >gi|316918626|gb|ADCU01000015.1| GENE 5 6757 - 7212 505 151 aa, chain + ## HITS:1 COG:YPO3397 KEGG:ns NR:ns ## COG: YPO3397 COG1734 # Protein_GI_number: 16123546 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Yersinia pestis # 1 151 1 151 151 263 97.0 1e-70 MQEGQNRKPSSLSILAIAGVEPYQEKPGEEYMNAAQLAHFKLILEAWRNQLRDEVDRTVS HMQDEASNFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDDDFGFCESCGVE IGIRRLEARPTADLCIDCKTLAEIREKQMAG >gi|316918626|gb|ADCU01000015.1| GENE 6 7360 - 8235 622 291 aa, chain + ## HITS:1 COG:yadB KEGG:ns NR:ns ## COG: yadB COG0008 # Protein_GI_number: 16128137 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 287 11 297 308 403 67.0 1e-112 MPSHHYIGRFAPSPSGDLHFGSLIAALGSYLQSRSQQGRWLVRIEDIDPPREVPGAADRI LRTLEHYKLHWDGSVLYQSHRHDAYRAALDFLRHEHKAYFCTCTRSRIHSLGGFYDGHCR TLGLGSAHAALRLEQTHPVYGFEDELHGWLAADRAMAEEDFIIHRRDGLFAYNLAVVVDD HFQGITEIVRGADLIEPTVRQMALYHQFNWQTPRYLHLPLALNHDGNKLSKQNHAEPIPM SDPRPVLAAALGFLGQSVPEEWADLTTEALLEYAVSHWDMQQIPKNSRLMA >gi|316918626|gb|ADCU01000015.1| GENE 7 8468 - 9781 1371 437 aa, chain + ## HITS:1 COG:YPO3399 KEGG:ns NR:ns ## COG: YPO3399 COG0617 # Protein_GI_number: 16123548 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Yersinia pestis # 1 416 1 419 440 685 82.0 0 MTVIPRDQHNISRQQISENALKVLYRLNKSGYEAYLVGGGVRDLLLGKQPKDFDITTSAT PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEHAGDGKNISQQAQNGMLLRD NVYGNIEEDAQRRDFTINSLYYSISDFTVRDYTGGLRDLQEGRIRLIGDPETRYREDPVR MLRAVRFAAKLDMTICPQTAEPIPRLAALLHEIPSARLFEESLKLLQSGYGFATYKLLCE YQLFQPLFPVISRHFTPNGDSPLERIINQVLKNTDHRLQNSMRVNPAFLFAAMLWYPLIE LAQKINDESGLTYYDAFALAMNDVLDEQCRTLAIPKRITALVRDIWSLQLRLSRRQGKRA HKLMEQPKFRAAFDLLALRAQAENSNELQRLTQWWDEFQKAPLTRQKTMANELGDDGARR RPRRPRRRAPRREGNGE >gi|316918626|gb|ADCU01000015.1| GENE 8 9772 - 10257 230 161 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 1 140 117 252 278 93 40 8e-18 RRMTRVYIALGSNLADPLHQVQSALNALAKLPQTQLIATSSLYRTPPLGPQDQPDYLNAV VALDTDLPAERLLDHTQKIELEHGRVRKDERWGPRTLDLDILLFGNDIINTERLTVPHYD MKNRSFMLYPLAEIAPDVHFPDGESLSHALKKLGAAPLHRW >gi|316918626|gb|ADCU01000015.1| GENE 9 10478 - 11272 832 264 aa, chain + ## HITS:1 COG:ECs0138 KEGG:ns NR:ns ## COG: ECs0138 COG0413 # Protein_GI_number: 15829392 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 409 76.0 1e-114 MKPTSITHLLQLKQQKTKFATITAYDASFAKLFEDQGIRVMLVGDSLGMTLLGHDSTLPV TIEDVAYHTRAVRRGAPYCLLLSDLPFMTYATPEQACANAATLMRAGANMVKLEGGSWLT ETVQMLTDRAVPVCAHLGLTPQSVNIFGGYKVQGRDKDGADKLLEDALALEAAGAQLLVL ECVPAALAKTITDALQIPVIGIGAGKDTDGQILVMHDALGITGGHTPKFAKNFLAGQSDI RSAIRLYIEEVEQGLYPAAEHTFN >gi|316918626|gb|ADCU01000015.1| GENE 10 11339 - 12199 871 286 aa, chain + ## HITS:1 COG:YPO3402 KEGG:ns NR:ns ## COG: YPO3402 COG0414 # Protein_GI_number: 16123551 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Yersinia pestis # 1 280 1 280 284 429 74.0 1e-120 MLIIETIPLLRREIRRWRQEGKRIALVPTMGNLHQGHLTLVEEAKARADVVVVSVFVNPM QFDRPDDLARYPRTLQEDCEKLTRLGVDLVFAPSEKEVYPKGLEQQTYVDVPSLSTMLEG ASRPGHFRGVSTIVSKLFNLIQPDIACFGEKDFQQLALIRKMVSDLNFDIDIVGVPIVRG PDGLALSSRNGYLTADERRLAPRLYNIMSHLATQLENGERHIDELLEQATSRLREAGLQP DELFVRDADTLLDVNVDTKTAVILVSAWLGKARLIDNMRVPFNAES >gi|316918626|gb|ADCU01000015.1| GENE 11 12328 - 12708 341 126 aa, chain + ## HITS:1 COG:YPO3403 KEGG:ns NR:ns ## COG: YPO3403 COG0853 # Protein_GI_number: 16123552 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Yersinia pestis # 1 126 1 126 126 214 87.0 3e-56 MVRTMLQGKLHRVKVTQADLHYEGSCAIDQDFLDAAGILQYEAIDIYNVDNGQRFSTYAI AAERGSKIISVNGAAARCACVGDTMIICSYVQMSDEQARSHNPKVAYFEGDNVMKRLAKA VPVQVA >gi|316918626|gb|ADCU01000015.1| GENE 12 12776 - 14107 861 443 aa, chain - ## HITS:1 COG:YPO3404 KEGG:ns NR:ns ## COG: YPO3404 COG0726 # Protein_GI_number: 16123553 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Yersinia pestis # 39 426 1 389 397 562 69.0 1e-160 MKLFQTITAGLLFSLWVICTPNTAIADLLPDSWQQYQYMEAERDSEIYSLVGEHVIPVGQ IQQGQILNVFQADSEYYEFRFGNGTGFIAREDVKELKKREPPRDNLSDLRKKSFQNLVTS RPVTVYSQADNQSTPVAILEENLRYPILDKQKDRLNQTWYAINLGDRFGYVSALDADLDN GIAVLTYHHILKNEENKRFRRTSTTTSDVAFSNQMAYLKQAGYSTLSMYQLEGYLTGSMN LPAKAVVLTFDDGLKSVYRYAYPVLKQNGQRATAFIISSRIKRHPQAWNPNGLQFMSISE LREIQDVFDIQSHTHFLHRVSANKQPILFSRSYHNILFDFQRSRRALSQFNPHVQYLSYP FGGYNQKAMDAARDAGFHLAVTTVQGRVRMGDNPFALKRLYVLRTDSVQSMAALIANKPQ PVPEKPNAVPVKVPAKAVTAPVL >gi|316918626|gb|ADCU01000015.1| GENE 13 14403 - 16025 1382 540 aa, chain - ## HITS:1 COG:YPO3409 KEGG:ns NR:ns ## COG: YPO3409 COG2132 # Protein_GI_number: 16123558 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Yersinia pestis # 1 540 1 532 533 722 67.0 0 MLRRDFIKLTAVLGASSALPLWSHSVFAANRPNLPIPSLLIPDAAGKIDLKVQTGSMNWK AGVQTPTWGINGPLLGPAMRLERGKDVAINVTNALPEATTMHWHGMEIPGTSDGGPQAVI EAGKVWTAAFKVDQPATTAWFHPHTHGLTGRQVAMGLGGLIIIDDEESTKLPLPKEWGVD DIPVILQDKRLDAKGHIDYQLDIMTAAVGWFGDMMLTNGTLYPQHLAPRGWLRLRFLNGC NARSLNLATSDGRPMYVVASDGGLLAEPVKLSELPILMGERFEVLIDTRDGKAFDIVTLP VKQMGMTLAPFDHALPVLHIQPTLKQSEAKLPDSLVNMPAIPVVDNVKTRWLQLMMDPQL DMMGMQMMMQRYGMESMAGMGMQGHGDMSGMDHSGMQGMKMQGHMGHGKMNHDGMGHGQK TAQDYDFMHGNKINGIAFDMAKPMFDVKRGTYEKWTISGEGDMMLHPFHIHGTQFRILSE NGKPPAAHRSGWKDTVRVEGWRSEVLVKFNHEAPKERAYMAHCHLLEHEDTGMMMSFTVS >gi|316918626|gb|ADCU01000015.1| GENE 14 16287 - 16634 378 115 aa, chain + ## HITS:1 COG:no KEGG:ETAE_0669 NR:ns ## KEGG: ETAE_0669 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 115 5 119 119 174 82.0 1e-42 MKKTSLVLLLLGLLSFTSASQAIDDMQSEDLADLTAIFVFLKNDCGYNDLPNAQIKKAIV FFANRNGWDLSNYNTKKMKALGEDSYHDLSRIAMPTATKCKYLARDSLSLLAYAN >gi|316918626|gb|ADCU01000015.1| GENE 15 16726 - 17091 403 121 aa, chain - ## HITS:1 COG:YPO3414 KEGG:ns NR:ns ## COG: YPO3414 COG3112 # Protein_GI_number: 16123563 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 118 1 118 119 171 74.0 4e-43 MDYEFRHDVTGQVVAVFSMGHEVVGHWFNEEVKGNLELLAQVEQAAAEVKGSERQWQLTG HEYTLWLDGEEVMVRANQLAVEGDEMEEGMSYYDEESLSFCGLEDFLQALDKYRAFITST R >gi|316918626|gb|ADCU01000015.1| GENE 16 17144 - 17362 74 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTEAMASVLFFQFASLDSTATQRMFTLHLSYFKLHVRWLRSPALLGKASPLGASAVRCSK WLTLFCPATRII >gi|316918626|gb|ADCU01000015.1| GENE 17 17424 - 18089 753 221 aa, chain - ## HITS:1 COG:STM1880 KEGG:ns NR:ns ## COG: STM1880 COG2979 # Protein_GI_number: 16765222 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 8 220 3 217 219 230 56.0 2e-60 MGCVMKNNWMQQIQSMLGDKTKSLGGSEGVGKLLAPAALGGLVGVLLGNKSSRKLVGKFG KSALIVGGSAAVGAVLWNKYKQRVKETHQDEPQFGAQVSPLDTRTKRLIQAIVFAAKSDG HVDETERQAIDKSLHELGLGAEAEHWVQDALAQPLNPDLLGKDIKNEDEALEVYYLSCVV IDIDHFMERSYLDALAQSLKIPEDVKQGIEHDISEKKRELA >gi|316918626|gb|ADCU01000015.1| GENE 18 18735 - 20204 838 489 aa, chain + ## HITS:1 COG:STM2315 KEGG:ns NR:ns ## COG: STM2315 COG2304 # Protein_GI_number: 16765642 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Salmonella typhimurium LT2 # 7 485 117 592 593 441 48.0 1e-123 MTVDHNKYPTYTENSVKSVAQEPISTFSADVDTGSYTVMRSLLNRGALPPSDSIRLEEWL NYFHYNYPKPVDNSPFSVATEIAPTPWNAHSKLLRIAIKATDINATALPPANLVFLIDVS GSMSDEDKLPLVKNSLKLLVNKMRDQDKISIVIYSGETKTVLPPTSGKDKSDILSAINQL SAGGSTAGGSGIDLAYQMAEKGFIKNGINRIILATDGDFNVGITDTQQLEEKIKKKSKNG INLTTLGFGQGNYNDSLMMHIADVGNGNYAYIDSMQEAQKVLVEQLSSTMSVVANDLKLQ VEFNPQQVKEYRLLGYEKRLLNQEDFSNDKVDAGDIGAGHTVTALYEIIPVGEKGWLEKS RYQHNTLSSDIKNNELALLRIRYKEPTLQKNKDADVSSEIRNDSKLIEIPLTKSQIKSSL SQASDDFRFASAVAALAQQLKNNGRYTGAFSIDDTINLARDAKGDDSLGLRAEFIQIANL AKNLSSTEK >gi|316918626|gb|ADCU01000015.1| GENE 19 20621 - 23218 2599 865 aa, chain - ## HITS:1 COG:YPO3415 KEGG:ns NR:ns ## COG: YPO3415 COG1049 # Protein_GI_number: 16123564 # Func_class: C Energy production and conversion # Function: Aconitase B # Organism: Yersinia pestis # 1 865 1 865 865 1609 90.0 0 MLKEYREHVAERAAEGVVPKPLDATQMAGLVELLKSPPAGEEEFLLDLLINRVPPGVDEA AYVKAGFLAAVAKGETTSPLVSPEKAVELLGTMQGGYNIHPLIDALDDTKLAPIAAKALS HTLLMFDNFYDVEEKAKAGNEYAQQVLKSWADADWYLSRPELAEKITVTVFKVTGETNTD DLSPAPDAWSRPDIPLHALAMLKNEREGIVPDQPGSVGPIKQIELLNKKGFPLAYVGDVV GTGSSRKSATNSVLWFMGDDIPHVPNKRAGGVVLGGKIAPIFFNTMEDAGALPIEVDVSK LNMGDVIDIYPYKGEVRHHETNELLAEFELKTEVLLDEVRAGGRIPLIIGRGLTTKAREA LNLPQSEVFRIAKPVADSGKGFSLAQKMVGRACGTKGIRPGQYCEPKMTSVGSQDTTGPM TRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGIIH SWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKM QPGITLRDLVHAIPYYAIQQGLLTVEKKGKKNIFSGRILEIEGLPELKVEQAFELADASA ERSAAGCTIKLDKAPITEYLSSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLADPQLLEG DADAEYAAVIDIDLADIKQPILCAPNDPDDARLLSDVAGEKIDEVFIGSCMTNIGHFRAA GKLLDGHKGQLPTRLWVAPPTKMDAAQLTEEGYYSIFGKSGARVEIPGCSLCMGNQARVA DGATVVSTSTRNFPNRLGTGANVYLASAELAAVASLLGRLPNPEEYQQYMEQVDKTAVDT YRYLNFDKLEQYTEKADGVIFQTAV >gi|316918626|gb|ADCU01000015.1| GENE 20 23635 - 23892 232 85 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKFKRKSKTFYLTVLQIASVLLAIAALFYLIDSSQTQYLVLNGDHLTRTDLDSGTMVWGM NFFLFALIVGVLLFTAAFFIGFKDD >gi|316918626|gb|ADCU01000015.1| GENE 21 24046 - 25470 672 474 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 6 452 3 444 458 263 34 4e-69 MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETIIVERYSTLGGVCLNVGCIPSKALLHVA KVIEEAKALAEHGIVFGEPKTDIDKVRVWKEKVITQLTGGLAGMAKGRKVKVVNGLGKFT GANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRVWDSTDALALKSVPERLLV MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKQFNLMLETKVTA VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKQLDAGKAGVEVDERGFIHVDKQ LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTEPEVAWV GMTEKEAKEKGISYETSTFPWAASGRAIASDCADGMTKLIFDKESHRIIGGAIVGTNGGE LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKK >gi|316918626|gb|ADCU01000015.1| GENE 22 25775 - 27661 1988 628 aa, chain - ## HITS:1 COG:STM0153 KEGG:ns NR:ns ## COG: STM0153 COG0508 # Protein_GI_number: 16763543 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Salmonella typhimurium LT2 # 1 628 1 629 629 871 84.0 0 MSIEINVPDIGADEVEVTEVMVKVGDKVEAEQSLITVEGDKASMEVPSPQAGVVKEIKVS VGDKVETGKLIMIFEAEGAAAAAPAKAEEKSAAPAPAATAAAKDVEVPDIGADEVEVTEV MVKVGDTVEAEQSLITVEGDKASMEVPAPFAGVVKEIKIATGDKVKTGSLIMVFEVAGAA PATSAPAQAAAPAASAGASAVKDVEVPDIGGDEVEVTEVMVKVGDKVAAEQSLITVEGDK ASMEVPAPFAGVVKEIKIATGDKVKTGSLIMTFEVEGAAPAAATSTNTAAKQESAPAKQE QKAAPASAAKAESKGEFTENDAYVHATPVIRRLAREFGVNLAKVKGSGRKGRILREDVQA YVKDAVKRAESAPAAATGGGLPGMLPWPKVDFSKFGEIEEVEMGRIQKISGANLSRNWVM IPHVTHFDKTDITDLEAFRKQQNEEAAKRKLDVKFTPVVFIMKAVAAALEQMPRFNSSLS EDGQKLTLKKYINIGVAVDTPNGLVVPVFKDVNKKSITELSRELMAISKKARDGKLTAGE MQGGCFTISSLGGIGTTHFAPIVNAPEVAILGVSKSAMEPVWNGKEFTPRLMMPMSLSFD HRVIDGADGARFITIINNMLSDIRRLVM >gi|316918626|gb|ADCU01000015.1| GENE 23 27675 - 30338 2734 887 aa, chain - ## HITS:1 COG:YPO3419 KEGG:ns NR:ns ## COG: YPO3419 COG2609 # Protein_GI_number: 16123568 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Yersinia pestis # 1 887 1 887 887 1716 91.0 0 MSERLNNDVDPIETRDWLQAIESVIREEGVERAQYLIDQVLGEARKGGVNLPTGATSRNY VNTIAVEDEPAYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATVYEV CFNHFFRARNQKDGGDLVYFQGHISPGVYARAFLEGRLTEEQMNNFRQEVHGKGLSSYPH PKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSEQTVYAFLGDGEMDEPESK GAITIATREKLDNLCFIINCNLQRLDGPVTGNGKIVNELEGIFAGAGWNVIKVIWGGRWD ELLRKDTSGKLIQLMNETLDGDYQTFKSKDGAYVREHFFGRYPETAALVKDMSDDEIWAL NRGGHDPKKVYAALKKAKETKGQATVILAHTVKGYGMGDTAEGKNIAHQVKKMNMDGVRQ FRDRFNVPVADADIEKLPYVTFDKDSEESKYLHERRQALQGYLPTRLTHFTEKLEMPALS DFGSLLEEQNKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYS PNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAASSWLAAATSYSTNDLPMIPFYIYY SMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYD PAYAYEVAVIMHDGLERMYGEAQENVYYYITTLNENYHMPAMPQGAEEGIRKGIYKLETL EGSKGKVQLLGSGSILRHVREAAKILAEEYGVGSDTYSVTSFTELARDGQDCERWNMLHP TETPRVPYIAQVMNDAPAVASTDYMKLFAEQVRTYVPASDYRVLGTDGFGRSDSRENLRH HFEVDASYVVVAALGELAKRGEIEASVVADAIKKFDINPEKVNPRLA >gi|316918626|gb|ADCU01000015.1| GENE 24 30499 - 31263 613 254 aa, chain - ## HITS:1 COG:YPO3420 KEGG:ns NR:ns ## COG: YPO3420 COG2186 # Protein_GI_number: 16123569 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 254 1 254 254 394 92.0 1e-109 MAYSKIRQPKLSDVIEQQLEYLILEGTLRPGEKLLPERELAKQFDVSRPSLREAIQRLEA KGLLLRRQGGGTFVQTNLWQSFSDPLAELLADHPESQFDLLETRHALEGIAAYYAALRGT DEDFTRIRACHVVIQEAQQSGDLDAEADAVMQYQVAVTEAAHNVVLLHLLRCMAPMLEQN VKQNFELLYSRREMLAKVNDHRASIFEAIVAREPEKAREASHRHLAFIEDILLELNREHS RRERSLRRLQQRKD >gi|316918626|gb|ADCU01000015.1| GENE 25 32139 - 33536 1306 465 aa, chain + ## HITS:1 COG:YPO3421 KEGG:ns NR:ns ## COG: YPO3421 COG1113 # Protein_GI_number: 16123570 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 1 465 1 460 465 722 84.0 0 MSDQQHRAQPQGDQLKRGLKNRHIQLIALGGAIGTGLFLGIAQTIKMAGPSVILGYAIGG FIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGNFAGFASGWNYWVLYVLVAMAELTAVGI YVQYWFPDIPTWVSAAVFFLAINAINLANVKVYGEMEFWFAIIKVVAIIGMIVFGAWLLL SGHAGPEATVTNLWEQGGFFPNGIMGLVMAMAVIMFSFGGLELVGITAAEADNPEKSIPK ATNQVIYRILIFYIGSLSILLSLYPWGKVVEGGSPFVMIFHELDSNVVATILNIVVLTAA LSVYNSCVYCNSRMLFGLAKQGNGPKALLKVDARGVPVVAIGLSAAATLLCVLINYVMPG KAFELLMALVVSALVINWAMISLAHLRFRTAKNREGVVPKFQAFWYPFGNYLCLAFLCAI LVIMYFTPGIQISVLLIPVWLIILGIGYAIKQRNQRNAQSVSSHS >gi|316918626|gb|ADCU01000015.1| GENE 26 33758 - 35161 1191 467 aa, chain + ## HITS:1 COG:STM0149 KEGG:ns NR:ns ## COG: STM0149 COG2211 # Protein_GI_number: 16763539 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Salmonella typhimurium LT2 # 1 463 1 463 468 726 77.0 0 MNENKLSITEKIGYGMGDAGCNMIGGAIMMFLSYFYTDVFGLTPALVGVLLLSVRVLDAV TDPIMGAIADRTQTRWGRFRPYLLWISFPYVIFSVLMFTTPEWTYNSKVIYAFATYFLMS LTYTAINIPYCSLGGVITADPKERVSCQSYRFIMVGVATLILSSTLLPMADWFGGEDKAK GYQMAMGVLALIGLCMFLFCFATVRERIKPAVPSNDALKQDLRDVWKNDQWVRILLLTFC NVCPGFIRMAATMYYVVWVMEKSTHFATMFISLGVIGMMFGSALAKPLTDRFCKLKVFFW TNIVLAVFSCSFYWVNPHATTLVLVLYFLLNILHQLPSPLHWSLMADVDDYGEWKTGKRS TGISFSGNLFFLKVGLAVAGAMVGFLLSAYGYDAGAAHQSETAIGGIILLFTVIPGVGYL ITAGVVRLLKVDRTMMIKIQSDLAKRRENYHELNELIDAKQAKPNTI >gi|316918626|gb|ADCU01000015.1| GENE 27 35212 - 36162 1071 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020424|ref|YP_526251.1| ribosomal protein L11 methyltransferase [Saccharophagus degradans 2-40] # 6 311 5 310 314 417 60 1e-115 MTTFPNPLIEQRADPYIHLHQDGWYYFIASVPEYDRLELRRAQTLEQLAEAEPTTIWRKP ESGPMSHLIWAPELHFINGQWVIYFAAAHSPEIKDGLFQHRMFALTCDEPNPLNGKWIER GRVVTPLDTFSLDATSFEYQGKHYYLWAQKDPDIRGNSNLYLAELETPWSIKGHPVMLTK PEFDWEIQGFWVNEGPAVIRHGDKIFVTYSASATDENYCMGLLWAKEGANILDANAWHKV DKPVFSTARHHRQFGPGHNSFTRTKEGQDVLVYHARNYTEIEGDPLYDPNRHTRIKIFHW DEKGMPVFGEPLADNR >gi|316918626|gb|ADCU01000015.1| GENE 28 36273 - 37127 756 284 aa, chain - ## HITS:1 COG:YPO3422 KEGG:ns NR:ns ## COG: YPO3422 COG3725 # Protein_GI_number: 16123571 # Func_class: V Defense mechanisms # Function: Membrane protein required for beta-lactamase induction # Organism: Yersinia pestis # 1 284 1 284 284 368 69.0 1e-102 MTLFSLLLVLAWERLFKLGHHWQIDHRFEPLFRLGSGVSLAKTLLMTIIWMAVVFVVLWA AHGMFFGVLSLVLWIIIALFCIGAGEIRKHYRAYLVAARKGDEHATDQMATELALIHGLP TDCTPDVRLRELQNALVWINFRFYLAPLFWFVVAGPYGPVALAGYAMLRAYQTWLTRQES PLLRAQSGVDLVLHWLDWIPVRLAGVAYALLGHGERALPAWLASLGDVHTSQYQVLTNLA QFSLAREPHLDPIKTPRAAVTLARKITMVLLVVVALLTIYGALM >gi|316918626|gb|ADCU01000015.1| GENE 29 37148 - 37705 493 185 aa, chain - ## HITS:1 COG:YPO3423 KEGG:ns NR:ns ## COG: YPO3423 COG3023 # Protein_GI_number: 16123572 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Yersinia pestis # 1 179 1 179 183 279 73.0 2e-75 MRLEDGWIVGVERVSSPHFDDRPDGEEPSLLVVHNISLPPGEFGGPYISQLFTGTLRAED HSFFAEIQHLRVSAHCLIRRDGQIIQYVPFNRRAWHAGVSRFEGRERCNDFSIGIELEGT DTQPFEPEQYRKLAEISALLMKEYPITPQRVTGHSDIAPGRKTDPGPMFFWDDYREMLSH YTKNK >gi|316918626|gb|ADCU01000015.1| GENE 30 37848 - 38738 462 296 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 18 294 6 283 286 182 36 9e-45 MPTRRYSADARRAELLERIENDIPYSVSNALREDLGGEVDADRDISAQLLPSDKQATATI ITREAGIFCGVRWLEEVFLQLGHKVTVEWQVKDGDALVPNQCLCKLTGPARILLTGERTA LNFLQTLSGVSTTVNHYVQILAGTKTRLLDTRKTIPGMRTALKYAVLCGGGSNHRLGLSD AFLIKENHIIAAGSIKKAVEQAFWMHTDVPVEVEVESIDELKEALDAGADIIMLDNFTTD MMREGVALTGERALLEVSGNVTDETLREFAETGVDFISVGALTKHIRALDLSMRFQ >gi|316918626|gb|ADCU01000015.1| GENE 31 38691 - 38888 93 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDAAQHAMSGCGYQAVYRKIGKGFDEGLMNVAMLPAVVRSLSQYGGVKMKLLEAHRKIEC ANMFG >gi|316918626|gb|ADCU01000015.1| GENE 32 38904 - 39386 471 160 aa, chain + ## HITS:1 COG:ECs0112 KEGG:ns NR:ns ## COG: ECs0112 COG4969 # Protein_GI_number: 15829366 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Escherichia coli O157:H7 # 12 153 2 142 146 155 53.0 2e-38 MNNAPTTILNFNQQSGFTLIELMVVIAIIAILSAVGIPAYQSYIQKAAMTDMLQAMMPYK TAVELCALEQGSLTECNIGANGIPPNKSTTYVSSLNVSQGTIAAIGLQALQGLTATLTPQ LNSSTGDLNWQKNCQVSGGNASLTTACEQVLRFPSVGDSQ >gi|316918626|gb|ADCU01000015.1| GENE 33 39383 - 40771 701 462 aa, chain + ## HITS:1 COG:hofB KEGG:ns NR:ns ## COG: hofB COG2804 # Protein_GI_number: 16128100 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Escherichia coli K12 # 9 461 9 461 461 417 50.0 1e-116 MTPTRHEQLCQQFGCVVISEDMQTIQIAGRDTNAPSKLTDAIKFATGKSVVWHSWSPAQL ESAIQNHTTPSGPTEDDSRVMQRLEHILTQAVKRRASDIHLEPNARGLSVRLRIDGVLQE LPIASGAETLRIIPRLKVMAELDIAERRLPQDGQLSATINTQNVTFRISTLPTRLGEKVV LRQVQEGAQPFELDSLGFEPDALRSFKQALEKPQGLILVTGPTGSGKTATLYSSLNSLRS SEINICSVEDPIESPLESVNQTAINTKAMLDFTAVLRALLRQDPDIIMIGEIRDAETANI AVNAAQTGHLVLSTLHTNSACETLVRLSQLGVAPYLIAASLSLVIAQRLVRKLCLHCRQL DHTPQTLIPEGWPQDEFHHWRAVGCEHCFNGYYGRRAVYEVLPISSTIQQAVLAQASAMQ IQTLAQRQGSISLWDSGLQLAHRGETTLSEIIRVLGGHFGEK >gi|316918626|gb|ADCU01000015.1| GENE 34 40772 - 41965 653 397 aa, chain + ## HITS:1 COG:STM0142 KEGG:ns NR:ns ## COG: STM0142 COG1459 # Protein_GI_number: 16763532 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Salmonella typhimurium LT2 # 5 397 6 396 400 268 39.0 1e-71 MNYTLYAWLALDAQQQLQKGLSLAEHKDQALAQLHAQGLAPLKLQQQYHFRSLTWKNTDR IRYIEQLATLLHAGLPLAKCLTLLAEGHPLRHWQCLLQRLASQINNGIPLSEAMMDYSSI FPPVYGKTIATAELTGRLDESCLALSEQQKRQVELKAKIVKALRYPALLLSVTVIVITIM LVWVLPQFAELYKNFNAPLPHFTRLLMTCSQALIHHAPLFIGLLLSIALISTYRYRRSAQ LRIRIQRSLLHLPIIGRLITMANLSQLFYSLAMTQQAGLPLLKGLENAAQAQQNPIFRLA VEAVIENLHQGEALSLAIKQQSVFPSLCFQLIRVGEESGRLDQMMSRLAQHYQYQANSLS DTLSQMIEPIMMTVMGVIVGGLVLAMYLPIFQLGGIM >gi|316918626|gb|ADCU01000015.1| GENE 35 42025 - 43071 1144 348 aa, chain - ## HITS:1 COG:YPO3428 KEGG:ns NR:ns ## COG: YPO3428 COG0516 # Protein_GI_number: 16123577 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Yersinia pestis # 1 348 1 347 347 634 89.0 0 MRIEEDLKLGFKDVLIRPKRSTLKSRSEVELEREYTFKHSGWKWSGVPVIAANMDTVGTF RMSEALASFDVLTAVHKHYSVEQWQAFVQRSSESVLRHVMVSTGTSEADFQKMKQILALS PSLKFICIDVANGYSEHFVAFLRKAREACPDKVICAGNVVTGEMVEELILSGADIVKVGI GPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFGGGADFVM LGGMLAGHDECEGRIVEDESGDKFMLFYGMSSESAMNRHVGGVAGYRAAEGKTVRLPLRG PVDNTVRDILGGLRSACTYVGAERLKELTKRTTFIRVAEQENRVYGSN >gi|316918626|gb|ADCU01000015.1| GENE 36 43465 - 44088 523 207 aa, chain + ## HITS:1 COG:YPO3430 KEGG:ns NR:ns ## COG: YPO3430 COG0237 # Protein_GI_number: 16123579 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Yersinia pestis # 1 206 1 206 206 269 72.0 2e-72 MTYIVALTGGIGSGKSTVAEAFNQLGVPVVDADIIARQVVAIGAPALQKIAEHFGPEILQ NDGALNRAALREVIFNQPQEKQWLDGLLHPLIHLETQRLLAAIVAPYALWVVPLLVENGL SKRAHRVLVVDVDPDVQLQRTMARDGISREQAENILAAQATRAQRLACADDIIENSGSPE TIAPRVASLHRHYLSLAAATQQDPHHE >gi|316918626|gb|ADCU01000015.1| GENE 37 44081 - 44833 648 250 aa, chain + ## HITS:1 COG:STM0139 KEGG:ns NR:ns ## COG: STM0139 COG4582 # Protein_GI_number: 16763529 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 6 250 3 247 247 347 72.0 2e-95 MSDTSTTVLFEHPLNEKMRTWLRIDFLLQQLQQHRHLQDITGALAFFRTTSDLLDVLERG EVRTELLKELERQQRKLLQWTEVPGVDQEMIRQLRSQLKNQAATLMAAPRIGQQLREDRL IALVRQRLGIPGGCCSFDLPTLHIWLHQPQDVRDELVDSWLTSLEPLSATLTLILSLIRN SGVFKPMISLNGFYQDNAEDADLLRMNIALDLQVYPQVSGHKTRFAIRFLPLDSEHGVVP ERLKFDLACC >gi|316918626|gb|ADCU01000015.1| GENE 38 44895 - 45092 179 65 aa, chain + ## HITS:1 COG:ECs0105 KEGG:ns NR:ns ## COG: ECs0105 COG3024 # Protein_GI_number: 15829359 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 4 63 3 62 65 94 83.0 6e-20 MTDEIMTVNCPICGKSVVWGEQSPYRPFCCKRCQLIDLGEWADEEKRIPSNPDLSESDDW SEEQQ >gi|316918626|gb|ADCU01000015.1| GENE 39 45150 - 45545 269 131 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631237|ref|ZP_00156775.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes [Haemophilus influenzae R2866] # 1 128 1 128 136 108 41 2e-22 MSLKHLHIAVGIIRNDEGEVFITRRGGDSHLSGLWEFPGGKIEANESPVQGLYRELLEET GIEVRDCELLCQLDHRFSDRIVTLYFYLVTDWDKTPYGREGQPMRWVHQHQLKAEEFPEP NKPIIEQLNRA >gi|316918626|gb|ADCU01000015.1| GENE 40 45644 - 48352 3048 902 aa, chain - ## HITS:1 COG:STM0136 KEGG:ns NR:ns ## COG: STM0136 COG0653 # Protein_GI_number: 16763526 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Salmonella typhimurium LT2 # 1 900 1 900 901 1590 91.0 0 MLIKLLTKVFGSRNDRTLRRMRKAVALINQMEPEMEKLSDDELKAKTNEFRERLAKGATV ESLLPEAFATVREASKRVFGMRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNA LSGKGVHVVTVNDYLAQRDAENNRPLFEFLGLSVGINLPGMTAPAKRAAYAADITYGTNN EYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYIRVN KLIPKLIRQEKEDSDTFQGEGHFSVDEKSRQVNLTERGLILIEEMLVEAGIMEEGESLYS PANIMLMHHVTAALRAHVLFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAK EGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTIVVPTNRPMIR KDMPDLVYMTEMEKIGAIIEDIRECTKRGQPVLVGTISIEKSEVVSQELTKAGIKHNVLN AKFHAKEADIVANAGLPSAVTIATNMAGRGTDIVLGGSWQTEVAELVEPTDEQIEEIKAA WKIRHDAVLAAGGLHIIGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDALMRIFAS DRVTGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIY SQRNELLDVSDVSETITSIREDVFKTVLDTYIPPQSLEEMWDIDGLQERLKNDFDLEMPI KEWLDKEPELHEETLRERIFQQAVEVYQRKEEVVGVEMMRNFEKGVMLQTLDSLWKEHLA AMDYLRQGIHLRGYAQKDPKQEYKRESFAMFAAMLESLKYEVISVLSKVQVRMPEEVEAM EQQRREEAERLARQQQLSHVDDETVAAQSLASQTGERKVGRNDPCPCGSGKKYKQCHGRL QG >gi|316918626|gb|ADCU01000015.1| GENE 41 48428 - 49018 378 196 aa, chain - ## HITS:1 COG:no KEGG:YPTB0696 NR:ns ## KEGG: YPTB0696 # Name: secM # Def: SecA regulator SecM # Organism: Y.pseudotuberculosis # Pathway: Protein export [PATH:yps03060]; Bacterial secretion system [PATH:yps03070] # 23 191 1 173 177 138 50.0 1e-31 MSIDDNNGKIFRLCVVETRKFNVIGILNRWRQFGRRYFWPHLLWGMVAATLGVPNALANT EQTKVADPSTSLQRLINAHNTNEFSWLQASKRRGSFQSIDYWHQHALRTAIRHLSYRMTP QVTAEPANDIQVDELHAQQLVLLSSLSSLLTLQPAITPSTPVLLMPMLDTAPNAHAPALW VAQVQGIRAGPQLRYI >gi|316918626|gb|ADCU01000015.1| GENE 42 49209 - 50126 737 305 aa, chain - ## HITS:1 COG:YPO0561 KEGG:ns NR:ns ## COG: YPO0561 COG0774 # Protein_GI_number: 16120889 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Yersinia pestis # 1 305 6 310 311 599 92.0 1e-171 MIKQRTLKRIIQATGVGLHTGKKVTLTMRPAAANTGVIYRRTDLNPPVDFPADAKSVRDT MLCTCLVNEHDVRISTVEHLNAALAGLGIDNLIIEVDAAEIPIMDGSASPFVYLLLEAGI EELNCAKKFLRLKQAVRVEDGDKWAELSPYNGFSLDFTIDFNHPAIDSSSQRYRMDFSAE SFVRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFEDDAEMPIAFRAP TTVLA >gi|316918626|gb|ADCU01000015.1| GENE 43 50239 - 51399 1438 386 aa, chain - ## HITS:1 COG:YPO0560 KEGG:ns NR:ns ## COG: YPO0560 COG0206 # Protein_GI_number: 16120888 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Yersinia pestis # 1 386 1 383 383 617 95.0 1e-176 MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNTDAQALRKTAVGQTIQI GSGITKGLGAGANPEVGRNSAEEDREGLRAALEGADMVFIAAGMGGGTGTGAAPVVAEVA KDLGILTVAVVTKPFNFEGKKRMAFAEQGIAELSKHVDSLITIPNDKLLKVLGRGISLLD AFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMSEMGYAMMGSGIACGEDRAEEAA EMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFETVGNTIRAFASDNATVVIGTSLDP EMNDELRVTVVATGIGMDKRPEITLVTSKQAPQPVIDQRYQQHGLSPLPQESKPAAAKVV NDQTAQGSNKEPDYLDIPAFLRKQAD >gi|316918626|gb|ADCU01000015.1| GENE 44 51470 - 52726 1088 418 aa, chain - ## HITS:1 COG:YPO0559 KEGG:ns NR:ns ## COG: YPO0559 COG0849 # Protein_GI_number: 16120887 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Yersinia pestis # 1 418 1 418 418 783 96.0 0 MIKSTDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSRGMDKGGVNDLESVVKC VQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEEEVTLEDVENVVHTAKSVR VRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHLITCHNDMAKNIVKAVERCGL KVDQLIFAGLAASYAVLTEDERELGVCVVDIGGGTMDMAVYTGGALRHTKVIPYAGNVVT SDIAYAFGTPPTDAEAIKVRYGCAMGTLVSKDESVEVPSVGGRPPRSLQRQTLAEVIEPR YTELLNLVNDEILQLQEQLRQQGVKHHLAAGIVLTGGAAQIDGLAACAQQVFHTQVRIGQ PLNITGLTDYAQEPYYSTAVGLLHYGKESHLSGEAEVEKRASVGNWFKKINGWLRKEF >gi|316918626|gb|ADCU01000015.1| GENE 45 52723 - 53589 785 288 aa, chain - ## HITS:1 COG:YPO0558 KEGG:ns NR:ns ## COG: YPO0558 COG1589 # Protein_GI_number: 16120886 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Yersinia pestis # 1 281 1 272 275 369 67.0 1e-102 MSQAALNTRDREPAGSGQRRSGAGLRRSNGIRLFGMIFLLIVLGSIVVSGWMVVSWMKDA SRMPLSKLVVTGERHFTKNDDIRQAILSLGAPGTFMTQNVDVIQQQIERLPWIKQASVRK QWPNELKIHLVEYVPVARWNDLRLVDAEGKPFSVPAERTIQQKMPLLYGPEGSENDVLEG YRSMSQELAKNNFKLKMVSMSARHSWQLGLEDDIRLELGRDDPSGRLARFEELYPALQQQ AQATNQRISYVDLRYDTGAAVGWAPAPIDTQTQQHANQQQNQAQVKQQ >gi|316918626|gb|ADCU01000015.1| GENE 46 53591 - 54511 1022 306 aa, chain - ## HITS:1 COG:YPO0557 KEGG:ns NR:ns ## COG: YPO0557 COG1181 # Protein_GI_number: 16120885 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Yersinia pestis # 1 306 1 306 306 471 79.0 1e-132 MAEKVAVLLGGTSAEREVSLQSGQAVLKGLIEAGIDAHPVDIKDFPATQLKDAGYDKVFI ALHGRGGEDGTLQGVLEFLQLPYTGSGVMASALTMDKLRTKLVWQASGLPVSPFVAISRA QFDEGLTQEMLVALNALGLPLIVKPSREGSSVGMSKVSDASEFDDALVEAFRHDDDVLVE KWLSGPEYTVAFLGEEILPSIRIQAPGVFYDYEAKYLSDKTEYFCPSGLSEDRERELAEL ARKAYKSLDCSGWGRVDVMMDSDGEFYLLEVNTAPGMTSHSLVPMAARQSGLSFSQLVAR ILELAN >gi|316918626|gb|ADCU01000015.1| GENE 47 54504 - 56006 1261 500 aa, chain - ## HITS:1 COG:YPO0556 KEGG:ns NR:ns ## COG: YPO0556 COG0773 # Protein_GI_number: 16120884 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Yersinia pestis # 5 500 1 491 491 812 86.0 0 MNKNVNTQQLAKLRTMVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPV TQQLTELGAQIYFHHRPENVKDASVVVVSTAISADNPEIVAAREARIPVIRRAEMLAELM RFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGTHARLGSSRYLIAEAD ESDASFLHLQPMVAVVTNIEADHMDTYHGDFENLKQTFINFLHNLPFYGRAVMCIDDPVV RELLPRVGRHITTYGFSEDADVRIESYQQNGAQGTFFICRQDKPRLAVTLNAPGRHNALN AAAAVSVATEEGIADEDILRALEGFQGTGRRFDFLGEYALENVNGKEGKAMLVDDYGHHP TEVDATIKAARAGWPNRRLVMIFQPHRFTRTRDLYDDFANVLSQVDVLLMLDVYSAGETP IPGADSRSLCRTIRGRGKLDPVLVSDAATLPATLAQFLQNDDLILTQGAGNIGKVARTLA EQKLQPINVDRTSTDEKHHG >gi|316918626|gb|ADCU01000015.1| GENE 48 56097 - 57176 1059 359 aa, chain - ## HITS:1 COG:YPO0555 KEGG:ns NR:ns ## COG: YPO0555 COG0707 # Protein_GI_number: 16120883 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Yersinia pestis # 9 359 4 354 356 548 81.0 1e-156 MSSNTDRQKNKRLMVMAGGTGGHVFPGLAVAHYLQAQGWQVRWLGTADRMEAQLVPQHGI EIDFIQISGLRGKGLKAQLGAPVRIFRAVRQAKAIMKAYQPDAVLGMGGYVSGPGGLAAW LCGIPVVLHEQNGIAGLTNRWLSKIAKRVLQAFPGAFPNAPVVGNPVREDVLALPIPQQR LAGRMGPIRVLVVGGSQGARILNQTMPKVAEQLGDRITLWHQVGKGALPAVLADYEKAGQ TQHKVTEFIDDMAAAYDWADVVVCRSGALTVSEIAAAGLPALFVPFMHKDRQQYWNALPL EQAGAAKIIEQPQLTVESVTATLAGWDRQTLLEMAEKARAAAIPDATERVAAVICEVAK >gi|316918626|gb|ADCU01000015.1| GENE 49 57173 - 58411 1138 412 aa, chain - ## HITS:1 COG:YPO0554 KEGG:ns NR:ns ## COG: YPO0554 COG0772 # Protein_GI_number: 16120882 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Yersinia pestis # 13 412 1 400 400 624 86.0 1e-178 MRLRLPRLPRPRLSLPHFGIITRFREWVMGAGESDAAMVVLYDRTLLWLTFGLAAVGFIM VTSASMPIGQRLADDPFLFAKRDALYLALAFGLAMVTLRVPMEIWQRYSNALLLASVAML LIVLVVGSSVNGASRWIAFGPLRIQPAEISKLALFCYLSSYLVRKVEEVRSNFWGFCKPM GVMVVLAVLLLAQPDLGTVVVLFVTTLGLLFLAGAKMWQFLAIIGSGIFAVVLLIIAEPY RMRRVTSFWNPWADPFGSGYQLTQSLMAFGRGEFWGQGLGNSVQKLEYLPEAHTDFIFSI LGEELGYFGVVLALLMVFFVAFRAMSIGRRALEADQRFSGFLACAIGIWFSFQALVNVGA AAGMLPTKGLTLPLISYGGSSLLIMSTALVLLLRIDYETRLEKAQAVVRSAR >gi|316918626|gb|ADCU01000015.1| GENE 50 58411 - 59727 1094 438 aa, chain - ## HITS:1 COG:ECs0092 KEGG:ns NR:ns ## COG: ECs0092 COG0771 # Protein_GI_number: 15829346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Escherichia coli O157:H7 # 1 438 1 438 438 752 85.0 0 MVDYQGKKVVIIGLGLTGLSCVDFFMARGVTPRVIDTRLSPPGLDKLPENVERHLGDMNQ EWLLDADLIVASPGIALASPALSVAAEAGVEIVGDIELFCREAQAPIVAITGSNGKSTVT TLVGEMAKSAGWSVGVGGNIGLPALMLLKQECDLYVLELSSFQLETTTSLRAAAATILNV TEDHMDRYPLGLQQYRAAKLRVYENAKVCVVNSDDALTMPIRGADSRCVSFGADVGDYHL NRQQGEIWLRVRGEKILNTREMKITGKHNFTNALAALALADAVGIPRASSLKALTTFTGL AHRFQLSLDHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSSLAQYL QGDNVRLYCFGRDGEQLAALRPEVAEQTETMEQAMRIIATRVKSGDMVLLSPACASLDQF KSFEQRGDEFSRLAKELG >gi|316918626|gb|ADCU01000015.1| GENE 51 59729 - 60811 1041 360 aa, chain - ## HITS:1 COG:STM0125 KEGG:ns NR:ns ## COG: STM0125 COG0472 # Protein_GI_number: 16763515 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Salmonella typhimurium LT2 # 1 360 1 360 360 617 92.0 1e-176 MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFLSLWIGPRMIARLQKMSFGQVVRND GPESHFSKRGTPTMGGLMILTSITISVLMWAYPSNPYVWCVLFVLLGYGVVGFVDDYRKV VRKNTKGLIARWKYFWQSVIALVVSFAMYSIGKGTPATELVVPFFKDVMPQLGLLYILLS YFVIVGTSNAVNLTDGLDGLAIMPTVFVAAGMGLVAWATGNMNFAAYLHIPYLRHAGELV IVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGTIAVLLRQEFLLVIMGGVFVME TLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR >gi|316918626|gb|ADCU01000015.1| GENE 52 60805 - 62181 1175 458 aa, chain - ## HITS:1 COG:YPO0551 KEGG:ns NR:ns ## COG: YPO0551 COG0770 # Protein_GI_number: 16120879 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Yersinia pestis # 1 458 1 458 458 606 70.0 1e-173 MIPVSLQAVALAVNGQLIGADTQISDVVTDTRKLTDGCLFIALKGEKFDAHDFAADAVAK GAGALLVSKRLPIDAPQIVVADTHIALGLLGAWIRQQMPARIIALTGSSGKTSVKEMSAE ILRQCGNVLYTAGNFNNDIGVPLTLLRLEPEHEFAVVELGANHVGEIAYTVNLVKPESAL VNNLAAAHLEGFGSLAGVAKAKGEIFDGLTSNGTAIINADSNDWPHWQEKITHQRVWRFS PQAAEAVDFFASDVRITHQGTEFELHTPFGTVPVILPLPGRHNVANALAATALTMSVGAT LENVRQGLSELKAVPGRLFPIRLNAQQLILDDTYNANVGSMTAAAQVLGSMPGYRVMVVG DMGELGTEEEDCHRQVGIAAREAGIDKVLSVGRLSHLISETSGCGEHFTDKTALIERLKN LLCEHAAITILVKGSRSAAMEQVVRGLSVQEMQENQSC >gi|316918626|gb|ADCU01000015.1| GENE 53 62178 - 63665 1276 495 aa, chain - ## HITS:1 COG:murE KEGG:ns NR:ns ## COG: murE COG0769 # Protein_GI_number: 16128078 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Escherichia coli K12 # 1 495 1 495 495 759 80.0 0 MADRNLRALLAPWVADAPERVLREMTLDSRIAAAGDLFVAIVGHTADGRHYIPQAIAQGV AAVIAEADGEAEDGTIRESHGIPVIYLSQLNQRLSALAGRFYHQPGADLRLIGVTGTNGK TTITQLLAQWGQLLGETSAVMGTVGNGLLGQVHPSENTTGSAVDVQHLLRSLVSQGATLA AMEVSSHGLVQDRVAALPFAASAFTNLSRDHLDYHGDMEHYEQAKWLLFSTHHSGEKIIN ADDEVGQRWLAKSPDAVAVTMEQRLPENWAGRWVSASQVDYHDSGASISFDSSWGKGVLE SRLMGAFNVSNLLVAAATMLALGYPLDVLCKTSSQLQPVCGRMEVFTAPGKPTVVVDYAH TPDALEKALEAARLHCKGQLWCVFGCGGDRDKGKRPLMGGIAEQYADRVVVTDDNPRSEE PRAIMADILNGMLDAGHAQAISGRAEAVTGAIMQAKPDDVILVAGKGHEDYQLVGNRRLD YSDRVTVARLLGVIA >gi|316918626|gb|ADCU01000015.1| GENE 54 63652 - 65415 1326 587 aa, chain - ## HITS:1 COG:YPO0549 KEGG:ns NR:ns ## COG: YPO0549 COG0768 # Protein_GI_number: 16120877 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Yersinia pestis # 1 587 1 587 587 1056 89.0 0 MKAVRPGKLKRQEDQASFVSWRFALLCGCIFIALMGLLGRVAYLQVINPDRLVREGDARS LRTQPILTSRGMISDRAGRPLAVSVPVNAIWADPKEVNEHGGITLDTRWKALADALEMPL DKMAARINANPKGRFVYLARQVNPAMADYIHKLKLPGIFQKQESRRYYPAGQVTAHIIGV TNIDGQGIEGVEKSFDRWLTGQPGERTVRKDRFGRVIEDISSVDSQAAHNLALSIDERLQ ALVYRELNNAVAFNKAESGTAVLVDVNTGEVLAMANSPSYNPNNLADTPKEAMRNRAITD IFEPGSTVKPMVVMTALQHNVVKENSVLNTLPYFVNGHQIKDVARYAELSITGILQKSSN VGVSKLALAMPSSALVETYSHFGLGKATNLGLVGESSGMYPKKQRWSDIERATFSFGYGL MVTPLQLARVYATIGSLGIYRPLSITKVDPPVPGERVFPEPIVRTVVHMMESVALPGGGG TKAAIKGYRIAIKTGTAKKVGPDGRYVDKYIAYTAGVAPASNPRFALVVVINDPQAGKYY GGAVSAPIFGAIMGGVLRTMNVEPDALPTGDKNELANNKKEGSGGRS >gi|316918626|gb|ADCU01000015.1| GENE 55 65475 - 65795 379 106 aa, chain - ## HITS:1 COG:STM0121 KEGG:ns NR:ns ## COG: STM0121 COG3116 # Protein_GI_number: 16763511 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Salmonella typhimurium LT2 # 4 106 19 121 121 156 83.0 7e-39 MIGNERHTLVAVIGGDILRHGKLPLILFIGVLVSAVLVVTTTHKTRLLTAQREQLVLERD ALDIEWRNLILEENALGDHSRVERIATEKLQMQHVDPSQENIVVKQ >gi|316918626|gb|ADCU01000015.1| GENE 56 65792 - 66736 954 314 aa, chain - ## HITS:1 COG:YPO0547 KEGG:ns NR:ns ## COG: YPO0547 COG0275 # Protein_GI_number: 16120875 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Yersinia pestis # 3 314 9 320 320 516 83.0 1e-146 MSEENYQHKTVLLDEAVNGLNLRSNGIYIDGTFGRGGHSRLILSQLGPEGRLLAIDRDPQ AIAAAAEITDPRFSIIHGPFSDMATYVRELGLEGQINGVLLDLGVSSPQLDDAERGFSFM RDGPLDMRMDPTRGLSAAEWLMKAEEEDIAWVLKTFGEERFAKRIARAIVERNRLEPMTR THELATLIANASPFREKHKHPATRSFQAIRIYINSELEEIERALNGALEILSPEGRLSVI SFHSLEDRIVKQFIRHHSRGPQVPAGIPLTEAQLRSQGGRKLKALGKMKPSSDEVSANPR ARSSVLRFAERTVE >gi|316918626|gb|ADCU01000015.1| GENE 57 66739 - 67197 474 152 aa, chain - ## HITS:1 COG:YPO0546 KEGG:ns NR:ns ## COG: YPO0546 COG2001 # Protein_GI_number: 16120874 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 152 1 152 152 249 84.0 1e-66 MFRGATTINLDGKGRLAVPMRYRELLLEESQGQMVCTIDLHQPCLLLYTLPQWEVIEQKL SRLSSMNPVERRIQRLLLGHASECQMDSAGRLLIASTLRQHAGLTKQVMLVGQFNKFELW DEENWYQQVKEDIDAQQTVTEPLSERLQDLSL >gi|316918626|gb|ADCU01000015.1| GENE 58 68047 - 68526 479 159 aa, chain + ## HITS:1 COG:no KEGG:EFER_0402 NR:ns ## KEGG: EFER_0402 # Name: ygaW # Def: putative inner membrane protein # Organism: E.fergusonii # Pathway: not_defined # 6 159 26 179 179 190 64.0 2e-47 MTSFKMELAVMFSPASRARSAAADIFALVVYSFIVGMLIEVFISGMSFNQSLSSRLLSIP VNILIAWPYGVYRDWFIRQSQRCRSKGMAKILADLIAYVSFQSPVYAIILWYVGADGAQI LAAVTSNAVVSMAMGVAYGYFLDYCRRLFKVSGYIKAQA >gi|316918626|gb|ADCU01000015.1| GENE 59 68583 - 69587 811 334 aa, chain - ## HITS:1 COG:YPO0543 KEGG:ns NR:ns ## COG: YPO0543 COG1609 # Protein_GI_number: 16120872 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 332 1 332 336 577 86.0 1e-165 MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGR TRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDA IIVSTALQPEHPFYQRWAKDPLPIIALDRALDPEHFISVVGADREDSEMLAEELRKFPAK SVLYLGALPELSVSFLREQGFRDAWREDPREVQYLYTNSYERDAAGVAFSNWLKNNEMPQ ALFTTSFPLLQGVLDVTLKHHGHLPTDLAIATFGDNELLDFLDCPVLSVGQRHRDIAERV LELVLASLDEPKKPKAGLSRMRRVLLKRGRLNRM >gi|316918626|gb|ADCU01000015.1| GENE 60 69796 - 70287 545 163 aa, chain - ## HITS:1 COG:YPO0540 KEGG:ns NR:ns ## COG: YPO0540 COG0440 # Protein_GI_number: 16120869 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Yersinia pestis # 2 163 3 164 164 258 95.0 3e-69 MRRILSVLLENESGALSRVVGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDAKVLEQI EKQLHKLVDVLRVSELVQGSHVEREIMLVKLQASGYGREEVKRSTDIFRGQIVDVTASLY TVQLVGTSDKLDAFLSAVREVAEIVEVARSGIVGVSRGDKIMR >gi|316918626|gb|ADCU01000015.1| GENE 61 70290 - 72008 1403 572 aa, chain - ## HITS:1 COG:YPO0539 KEGG:ns NR:ns ## COG: YPO0539 COG0028 # Protein_GI_number: 16120868 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Yersinia pestis # 1 572 1 575 575 1019 84.0 0 MEMLSGAEMVVRSLIDQGVKHVFGYPGGAVLDIYDALHTVGGIEHVLVRHEQGAVHMADG FARATGEVGVVLVTSGPGATNAITGIATAYMDSVPMVVISGQVATSLIGNDAFQECDMVG ISRPVVKHSFLVKHTEDIPTILKKAFYLASTGRPGPVVVDLPKDIMNPAIKLPYSYPESV KMRSYNPTLQGHRGQIKRALQTLLAAKQPIIYAGGGVISSGCHEELRELAERLNIPVTTS LMGLGGFPASHAQSLGMLGMHGTYEANMAMHNADVIFAVGVRFDDRTTNNLAKYCPNATV LHIDIDPTSISKTVDADIPIVGDAKEALATFLELLGQKEVKQDFDGLRDWWQSIAQWRAR KCLSYDTTSGRIKPQQVIETLHRLTKGEAYVASDVGQHQMFAALYYGFDKPRRWVNSGGL GTMGFGLPAALGIKLALPEETVICVTGDGSIQMNIQELSTALQYDLPVVVINLNNRFLGM VKQWQDMIYAGRHSQSYMESLPDFVKLAEAYGHVGISIRTPDELESKLEQALAVKNRLVF VDVTIDETEHVYPMQIRGGSMDEMWLSKTERT >gi|316918626|gb|ADCU01000015.1| GENE 62 72476 - 74278 1444 600 aa, chain - ## HITS:1 COG:YPO0537 KEGG:ns NR:ns ## COG: YPO0537 COG1022 # Protein_GI_number: 16120866 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Yersinia pestis # 1 597 1 599 601 865 69.0 0 MINELNKYHLVERIQQQIKHIPHRVALREWSAHGETPYTWQQVGLRVEKLALALCALGVD VQERVAIFAHNSVSWSLIDLAILHLRAITVPVYSTNTAAQTAFVLNDADVRILFVDGQSQ YNAALALRGVCPQLEHIIVMSDSIDMQGCEIACTLDSFAASAQERFLPLLKERIEQADMS DLFTLIYTSGTTGEPKGVMLNYTNMGAQLRLHDERLTVTAEDVSLCFLPLSHVFERAWSF YVMHSGAQNVYLSDTNQVREAMQSVKPTVMCAVPRFYEKIFSAIHEKVAQAKWHKRAMFK CAIWVGEKRFLTERAGCKPNVVLSAMHKLADKLVLSKLRGILGGRVRFLPAAGAKLDDNV ILFFQALGANIKYGYGMTETCATVSCWEENDFRFGSIGKPLPDVEVRIGHENEIQVRGPI VMCGYYNKPLETAATFTEDGWLKTGDAGALDENGNLFITERLKDLMKTSNGKYIAPQMVE GTLAQDRFIEQVAVIADARKFVSALIVPCFESLEEYAKSINLKYHDRLDLLRHSHIVEMF DQRLREMQKGLAKFEQVKRFTLLPEAFSMEQGELTPTLKLRRKIINSRYQMEIESMYLEH >gi|316918626|gb|ADCU01000015.1| GENE 63 74641 - 75594 664 317 aa, chain - ## HITS:1 COG:YPO0535 KEGG:ns NR:ns ## COG: YPO0535 COG0583 # Protein_GI_number: 16120864 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 19 315 20 316 318 375 62.0 1e-104 MSAQSEVMSLAENGSTELVQLRNVDLNLLTVFDAVMQVQNITRAAHALGMSQPAVSNAVA RLKVMFNDELFMRYGRGIQPTHRAYQLFGSVRQALQIVQNELPGSGFNPLISERVFNVAI CSPLDIRLTAKLFNQIKDSASHVQLHLNSSVNENIERKLRYQEKDFLISYSRFESDEYSC EPLFKDEFVLAVSKNHPRINNMVSAQQLLVEQHAVVGLNLFSSLSRGYYESSELARCIAY QGTDMNSVLSVVSKTEMVAIAPRWLVEEYAEHLNLSAVLLSDIERERTCYLSWHHAAERD SGHQWMKSVLSEFGSKF >gi|316918626|gb|ADCU01000015.1| GENE 64 76368 - 77954 1394 528 aa, chain + ## HITS:1 COG:YPO0533 KEGG:ns NR:ns ## COG: YPO0533 COG0119 # Protein_GI_number: 16120862 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Yersinia pestis # 1 528 1 520 520 909 86.0 0 MSQQVIIFDTTLRDGEQALQASLSVKEKMQIAMALERMGVDVMEVGFPVSSPGDFESVQT IARNIKNSRVCGLARCVDKDIDVAAEALRVAEAFRIHVFLATSTLHVESKLKKSFEDVVA MAVHSVKRARNYTDDVEFSCEDAGRTPLDNLCRIVEAAIKAGATTINIPDTVGYTTPYQF GGIITNLYERVPNIDKAIISVHCHDDLGMSVANSITAVQAGARQVEGTINGIGERAGNCA LEEVIMAIRTRSEMLGVHTNIHHQEIYRTSQFVSQMCNMPIPGNKAIVGSNAFAHSSGIH QDGVLKNRENYEIMTPESIGLNQVQLNLTSRSGRAAVKHHMEEMGYREGTDFNLDTLYDA FLKLADKKGQVFDYDLEALAFINKQQEEPEHFRLDYFSVQSGTSVMATASVKLNIGGEIS AEAATGNGPVDAVYQAINRIAGYDIDIVKYQLSAKGQGKDALGQVDIVANYNGRRFHGVG ITTDIVESSALALINVLNNIWRAQQVEKEKQRIHQTQTTSSHSNQEAV >gi|316918626|gb|ADCU01000015.1| GENE 65 77957 - 79048 1191 363 aa, chain + ## HITS:1 COG:YPO0532 KEGG:ns NR:ns ## COG: YPO0532 COG0473 # Protein_GI_number: 16120861 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Yersinia pestis # 1 361 3 363 365 663 87.0 0 MSKTHHIAVLPGDGIGPEIMAQAYKTIDAVRQRFGLRISTSEYDVGGAAIDKHGTPLPAA TIAGCEQASAILFGSVGGPKWEHLPPAQQPERGALLPLRKHFKLFSNLRPARLYEGLEEF CPLRSDIAARGFDILCVRELTGGIYFGQPKGREGQGMHERAFDTEVYHRFEIERIARIAF EAARKRRGKVTSIDKANVLQSSILWREIATEIGKDYPDVALNHMYIDNATMQLIKDPSQF DVMLCSNIFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIA QILSFALLLRYSLNADDAANAVEQAVNKALEQGFRTGDLAGDGQAISTSEMGDVIARFIA QEA >gi|316918626|gb|ADCU01000015.1| GENE 66 79051 - 80463 1434 470 aa, chain + ## HITS:1 COG:YPO0531 KEGG:ns NR:ns ## COG: YPO0531 COG0065 # Protein_GI_number: 16120860 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Yersinia pestis # 2 466 8 472 476 821 88.0 0 MAKTLYQKLFDAHVVYEAKNETPLLYIDRHLVHEVTSPQAFDGLRAMGRPVRQTSKTFAT MDHNVSTQTKDINACGDMARIQMQELMKNCKEFGVQLYDLNHPFQGIVHVIGPEQGMTLP GNTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQGRAKTMKIEIIGDAAEGITA KDIVLAVIGKIGHAGGTGHVVEFCGKAVEALSMEGRMTLCNMAIEMGAKAGLVAPDETTF TYLKGRQFAPQGDNWEKAVEYWRTLKSDAGAQFDAIITLNAGEIAPQVTWGTNPGQVIAI NQPIPTPESFSDPIERASAEKALAYMDLAAGVKLTDVAIDKVFIGSCTNSRIEDLRAAAA IAKGRKVANGVQAIVVPGSGPVKAQAESEGLDKIFIEAGFEWRLPGCSMCLAMNNDRLNP GERCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVSGHFADIRELATAAV >gi|316918626|gb|ADCU01000015.1| GENE 67 80478 - 81095 594 205 aa, chain + ## HITS:1 COG:STM0110 KEGG:ns NR:ns ## COG: STM0110 COG0066 # Protein_GI_number: 16763500 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Salmonella typhimurium LT2 # 11 205 7 201 201 344 81.0 7e-95 MATSTQSGLIKHSGIVVPLDAANVDTDAIIPKQFLQKVTRTGFGQHLFNDWRFLDDAGQQ PNPDFILNQPEFKGASILLTRENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFN NQLLPVTLSEAEIDELFAQVEAAPGMSFTVDLETQTVQAGDKSYSFELDSFRRHCMMNGL DSIGLTLQHEAAISEYEGKLPEFLR >gi|316918626|gb|ADCU01000015.1| GENE 68 81919 - 83391 1295 490 aa, chain - ## HITS:1 COG:NMB0470 KEGG:ns NR:ns ## COG: NMB0470 COG0471 # Protein_GI_number: 15676381 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Neisseria meningitidis MC58 # 7 490 6 488 488 479 61.0 1e-135 MGKLTPLKPIPSLISIAIALIIWFVIPVPEGVSPNAWHLLALFVGTIAAIIGKAMPIGAV SIIAIALVAVTQVTNPGKPTAALDDALSGFSNQLIWLIGISIMISLSLNKTGLGARIGYY FISLFGKKTLGIAYALALAETTLAPVTPSNTARGGGIIHPIMKSIADSFGSKPELGSTEK IGRYLSLVNYNINPVTSAMFITATAPNPLIVNLLLKGTDSTFELTWSMWAIAALVPGIIS LLVMPLIVYWLYPPEIKSTPDAPRFAKDKLRDLGPISLAEKITLGVFALLLFLWAGIPAF LLGSDWTVNPTTAAFIGLSILLASGVLSWDDVLKHKGAWDTVVWFAALVMMATYLGKLGL ISWLSQTVGGAISHLGMGWIGGMILLTLVYVYSHYFFASTTAHITAMFAAFFAAGLALGA PPALLGLVLAFSSSLMMSLTHYGTGTAPIIFGSGYVTLGEWWKTGFVLSVINLLIWMVIG SLWWKWLGYW >gi|316918626|gb|ADCU01000015.1| GENE 69 83585 - 84379 536 264 aa, chain - ## HITS:1 COG:RSc0225 KEGG:ns NR:ns ## COG: RSc0225 COG3541 # Protein_GI_number: 17544944 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Ralstonia solanacearum # 9 231 21 243 281 300 63.0 1e-81 MELRTSCGVSAAMRMRIQQTLCALEEEYQIRILYACESGSRGWGFASTDSDYDVRFIYVH RPEWYLRVEPGRDVIEMPIDDELDVCGWELRKTLGLIKRSNPTLMEWLDSPIVYRNEERA TAALRALLPDYFSGLRGRYHYLSMARKNFRGYLQGEEVRLKKYFYVLRPLLAVRWIEAGK GVPPMRFDQLVAGTVDDADLLDEIAQLLHAKCEASEAKYGPRMKKIHEFIQYELDDNLSR CEVVDNVACSDDVLNRLLFQEVNC >gi|316918626|gb|ADCU01000015.1| GENE 70 84388 - 85524 1116 378 aa, chain - ## HITS:1 COG:PA4582 KEGG:ns NR:ns ## COG: PA4582 COG0330 # Protein_GI_number: 15599778 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Pseudomonas aeruginosa # 1 376 3 379 381 443 62.0 1e-124 MRKNIIIQKGQIGLLTKKGDYQKVLEAGEYRFFDWTNQLAVTVVNLSDSRVEPALAEHLR SYQPEWVERYCTAVDLSEQEIGLRYENDILQEILPPGTRRLYWLNGNQQRIERIEANNVE VPSEIVAALHQPKLRNRTIKGGEGVLLVQVPAWHVGILKIDGATQALLSPGISGYWRFNH AVEAEIVDTRLQVLEVSGQEILTRDKVNLRLNLAANWRYSDVLQSFALVAKPLEHIYREL QFALREAVGTRTLDELLENKQIIDDIVSEQVSRKLVGYGIEVVSLGVKDIVLPGDMKTIL SRVVEAEKLAQANVIRRREETSATRSLLNTAKVMENNPVALRLKELETLERVAERIDKIS VFGGLDQVLNGLIQIKGV >gi|316918626|gb|ADCU01000015.1| GENE 71 86036 - 87613 1121 525 aa, chain + ## HITS:1 COG:PA4581 KEGG:ns NR:ns ## COG: PA4581 COG4650 # Protein_GI_number: 15599777 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Pseudomonas aeruginosa # 1 524 1 531 531 690 66.0 0 MKRRVVIGVLGTVLDKRGKRANRWNKWRPTVGLCQQPDLPIDRLELLYQPRDLGMAQQVS DDIAQLGSTQVCLHQVNLHDPWDFEEVYTAFLDFATHYPFDTDNEEYLIHITTGTHVVQI CWFLLAEARYFPASLLQTSPAPKSQEKTEATPAGVYSIIDLDLSRYSKLTRRFQREQQAS ISFLKSGIATRNTTFNTLIDQIERVALRSTAPILLTGPTGAGKSFLAQRIYQLRQSRHKV SGRFVAVNCATLRGDNAMSTLFGHIKGAFTGALQARSGLLREADGGVLFLDEIGELGLDE QAMLLKAIEEKRFLPFGSDKEVSSDFQLIAGTHRDMRQCVKQGRFREDLYARINMWTFPL PSLAQRREDIEPNLDFELNRYSQEQQAQVRFNKEARQRYLQFACSEQAEWRGNFRELAAS VTRMATLADTGRIDDELVQEEIARLQQNWQKDQPEILPDLPELDLFDRSQLASVISVCRS SDSLSEAGRKLFSVSRQLKKQPNDADRLRKYLARFGLSWESIKGE >gi|316918626|gb|ADCU01000015.1| GENE 72 87619 - 88800 1034 393 aa, chain - ## HITS:1 COG:setA KEGG:ns NR:ns ## COG: setA COG0477 # Protein_GI_number: 16128064 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 392 1 392 392 494 70.0 1e-139 MTSLLTARRRINPIYAAFLIVAFLTGIAGALQAPTLSLFLTTEVKVRPLWVGLFYTVNAI VGIAVSFLLAKRSDRQGDRRKLIMFCCAMAVGNCLLFAFCRSYLLLISAGVFLAALANTG MPQIFALAREYADRSASEVVMFSSVMRAQLSLAWVIGPPLSFMLALNYGFTFMYLIAAAV FILAIVLVTFMLPSMPRTETTGEAVVIPTNAFGDKNVVMLFISSMLMWTCNTMYIIDMPL YITQDLGLPENLAGLLMGTAAGLEIPAMILAGYYVKRFGKRNMMLFAVAAGILFYAGLVL FKFKLALMVLQLFNAVFIGIIAGIGMLYFQDLMPGRAGSATTLFTNSISTGVIMAGVLQG ALAETLGHYAVYWLATALAVVALILCSRVRDVP >gi|316918626|gb|ADCU01000015.1| GENE 73 89026 - 90744 1275 572 aa, chain + ## HITS:1 COG:YPO0524 KEGG:ns NR:ns ## COG: YPO0524 COG4533 # Protein_GI_number: 16120855 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Yersinia pestis # 1 551 1 551 553 815 72.0 0 MATSRLQHQFIRLWQSFQGKSAETTLADLAETLSCSRRHVRTLLNAMQQQGWLHWQAESG RGKRSTLTFQSTGLQVQQLRAEELLDQDHIEQLVQLVGDRSSVRQMLLSQLGRSFRQGKH ILRILYYRPLFNLLPGTPMRRSETHLARQIFSGLTQLNEENGELEPDLAHHWQALTPLHW RFYLRPAIRFHNGRELEMADVIHSLERLREQPLFSHLKSITSPNPYVIDIQISTPDEWLP WLLGSVNAMILPREWKSLPNFTRSPIGTGPYQVVRNTQTQLKIRAYDDYFGFRALIDEVN IWVLPEISEELVHAGVQLQSDETGKDELESRLEEGCYFMLFDQRSAITSDPAVREWLCQV INPIALLNKASKIHQRYWSPAYGILPRWHHNLLISDNEKPAHLTHLTLTVYTKHSEFHAI FLALKPLLADYGVELTMQEISYSRWYEGDAKSDLWLGSANFYMPLEFSIFSMMYELPLLQ HCLSGDLQQDASQWRNNALPMAEWSQRLVQEHQLHPLFHHWLKLHGQHSMRGVRMNTLGW FDFKSAWFAPPAQSNESDIHELTVSTGCEKPR >gi|316918626|gb|ADCU01000015.1| GENE 74 91099 - 92070 831 323 aa, chain + ## HITS:1 COG:YPO0522 KEGG:ns NR:ns ## COG: YPO0522 COG4143 # Protein_GI_number: 16120853 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type thiamine transport system, periplasmic component # Organism: Yersinia pestis # 1 323 10 330 330 506 77.0 1e-143 MLISTAFAVHSAADKPVLTVYTYDSFAAEWGPGPKVKAAFEKECGCELKFVALEDGVSVL NRIRMEGQKSSADVVLGLDNNLVQAAEKTGLFVPSNVDTQTLTVPGGWRNNTFVPYDYGY FAFVYNKNTLKNPPTSLKQLIESPEKWKVIYQDPRTSTPGLGLMLWMQKVYGDQAPQAWQ KLAQKTVTVTKGWSEAYGLFLKGEADLVLSYTTSPAYHIIEEKKDNYAAAEFSEGHYLQV EVAAQLAGSKQPELAHKFMQFITTPAFQNEMPTGNWMYPVIQTTLPQGFEQLNVPAKALE FTPAEVAQNRATWIRSWQAAVSR >gi|316918626|gb|ADCU01000015.1| GENE 75 92046 - 93650 1230 534 aa, chain + ## HITS:1 COG:YPO0521 KEGG:ns NR:ns ## COG: YPO0521 COG1178 # Protein_GI_number: 16120852 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Yersinia pestis # 17 531 1 515 519 683 76.0 0 MASRRQPLIPFWLLPGLFAAIAIIAVATAAFSALWRHAPELDWYSLWQDDYLWHVVRFTF WQAFLSAMCSVFPAILLARALFRRRFIGRQLLLRLCAMTLVLPVLVAVFGILSVYGRQGW LAQICQWLGIDYAFSPYGLQGILLAHIFFNLPLAARLLLQALENIPTEQRQLAAQLGMSS WQQFHFVEWPYLRRQILPAGALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDL SRAALLAMLQLFCCLGLVMLSQKLSGILPVGHTRAIKWRNPQDTLFARWIDGSVILCALL LILPPLFAVVADGLNQAVNRVLVQPILWQATLTSLKIALGAGLLAVLLTMMLLWSSRELV LRQRRWLGQGMELTGMLILAMPGIVLATGFFLLLTDTIGIPQSAYGLVILTNALMAIPYA LKVLENPMRDLAERYNPLCLSLRIQGINRLRLIELRALKRPLSQAMAFACVLSLGDFGVV ALFGNEQFRTLPFYLYQQIGAYRSQDGAVTALLLLILCFLLFTLLERLPGRDKS >gi|316918626|gb|ADCU01000015.1| GENE 76 93647 - 94342 208 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 206 4 217 223 84 28 3e-15 MITLNDLTYLYEHQPMRFSLDVSAGERIAILGPSGAGKSTLLALIAGFLMADKGTVMLDG INHTNTPPSKRPVSMLFQENNLFSHLSIEQNLGLGLDAGLRLNRTQKQRLHEIAQRVGII DCLPRLPSQLSGGQRQRAALARCLLRHQPILLLDEPFSALDPALRGEMLQLLEQVCSEQN LTLLMVSHNLDDAARIASRTLLIADGRFAYDGSTQDLLDGKDPLAAALLGR >gi|316918626|gb|ADCU01000015.1| GENE 77 94544 - 95542 701 332 aa, chain + ## HITS:1 COG:no KEGG:PSPTO_1342 NR:ns ## KEGG: PSPTO_1342 # Name: not_defined # Def: hypothetical protein # Organism: P.syringae # Pathway: not_defined # 14 332 36 351 352 113 26.0 1e-23 MKILYKWKKLALCILLASTTTITACDDNKNTKTTTSENDSQKQVRDKEQHQIVKYNAYID VANAEFITDGFSGDFEKQMQFINDNIENKKPLKNYFAVNDNNIQGKKKGLENALKMEGNL AELDVAAEKYLQALNVLEPLNQELSMYGNTKEYLSDGGKLFMEKEPALFEQLKKVLLAED EFKEQIQILDEKNIKQTFDSAKKESLSYYKIGVIYYGKLISREIKEAISQADNTGLAKLD ENINLMNTLVKGYDKTKTVTGGTCLSSMTLFLASARTISNELKHDRTEYTTVPPVAFSGM ANMQGGSPAQQEANTMNDNLSSVIDSFNTDGC >gi|316918626|gb|ADCU01000015.1| GENE 78 95611 - 96378 650 255 aa, chain - ## HITS:1 COG:YPO0519 KEGG:ns NR:ns ## COG: YPO0519 COG0586 # Protein_GI_number: 16120850 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Yersinia pestis # 1 253 1 253 255 311 66.0 1e-84 MEAYLQHLVTQSVAYSLIAVFLVAFLESLALVGLLLPGTVMMATLGALIGSGQVNFYYAW GVGILACFAGDWISYFIGRAFKDPLHRWSFIKKNKALLDRTEHALHRHSMMTVLIGRFVG PTRPVVPMVAGMLALPPRKFIPPNIIGCITWPPVYFFPGILAGVAIDIPAGSGSTLFKVL LALVVVSIWIAGWLSWRWWREGKRSADKLSQWLTPLRLRIATVTMWGLAAVSFVFMHNHP LMPIYRSLLWKVVQF >gi|316918626|gb|ADCU01000015.1| GENE 79 97527 - 99881 1773 784 aa, chain + ## HITS:1 COG:YPO0518 KEGG:ns NR:ns ## COG: YPO0518 COG0417 # Protein_GI_number: 16120849 # Func_class: L Replication, recombination and repair # Function: DNA polymerase elongation subunit (family B) # Organism: Yersinia pestis # 6 784 5 789 789 1235 75.0 0 MTQSPQQGFVLTRHWRDTPAGVSVELWLATDNGPQKVILPPQKAVAFLPAEQLPQAEKLL HSERHVEIKPLPMKDFHHRPVVGVYCHSYRQLMNLEKTFKEHGITLYEADIRPPDRYLME RFICAPVWFSGHQDTQGVWRNTQLKPNPSYRPTLKLVSLDIETTMHGELYSIGLHGCGQR VVYMLGPENGDASQLDFELIYVNSRPQLLEALNQWIAQHDPDAIIGWNLIQFDLRVLQKH AERYAIPLRLGRGGDVLEWREHGFKQGHFFASATGRLIIDGIEALKSAFWNFPSFSLENV SQTLLGEGKAMDDPYSRMSEIDRRFREDKPALAHYNLKDCELVTRIFDHTHLMTFLLERA TVTGLNADRNGGSVAAFTHLYLPRMHRVGFVAPNQGDLPEEASPGGFVMDSRPGLYDSVL VLDYKSLYPSIIRTFLIDPVGLIEGLRQPDDAHSISGFRGARFARAQHCLPDIVSQIWQG REAAKREKNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHEIMRRTRELIEA EGYPVIYGDTDSTFVWLNRAHDEQQAAAIGQHLITVVNQWWKEHLRTEYGLESALELEYE CHYRRFLMPTIRGAELGSKKRYAGLKGDEMVYKGMETVRSDWTPLAQQFQQELYQRIFLK QPYQEFIRDYATRLMNAEFDDRLVYRKRLRRKLSDYQRNVPPHARAAKIADEYNRELNRP LQYQNGGWISYVITTAGPEPLECQRAPIDYDHYLSRQLQPVADAILPFMQDDFSTLVAGQ LGLF >gi|316918626|gb|ADCU01000015.1| GENE 80 99822 - 99932 70 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLMDDSAFVTPKKDLSELKQSKLTSNQRRKVILHEG >gi|316918626|gb|ADCU01000015.1| GENE 81 100112 - 103018 3401 968 aa, chain + ## HITS:1 COG:YPO0517 KEGG:ns NR:ns ## COG: YPO0517 COG0553 # Protein_GI_number: 16120848 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Yersinia pestis # 1 968 1 968 968 1669 84.0 0 MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPATGENRLYSRNDSPITRVMFNPGDT ITSHDGWQLKIDEVKEENGLLIYIGTRLDTEEANVVMREVLLDSKLTFSKPQDRLFAGQI DRMDRFALRFRARKYQSEQFRLPWSGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVG LGKTIEAGMIIHQQLLAGRAERILIVVPETLQHQWLVEMLRRFNLRFSLFDDARYSEAML DATNPFETEQMVICSLDFVRRNRQRLEQMADASWDLLVVDEAHHLAWSENAPSREYQVIE QLAEHIPGVLLLTATPEQLGQESHFARLRLLDPNRFHDYQEFVSEQQKYRPVADAVTLLL NDGHLTNEELNMLSEMIAEQDIEPLLKAANAGGTGSVDARNELVKMLMDRHGTSRVLFRN TRQGVKGFPQRELHQITLPLPSQYQTAIKVSGIMGSKKTVEARANDMLYPERIYQEFEGE NATWWNFDPRVEWLMNFLTSHRDEKVLVICAQAASAVNLEQVLREREAIRAAVFHEGMTI IERDRAAAYFASQEEGAQVLLCSEIGSEGRNFQFAHHLVMFDLPFNPDLLEQRIGRLDRI GQNHDIKIFVPCLENTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSSYQTLLGYLAAPSQL EGFDDFIKACRTQHDALKAQLEQGRDRLLEMHSNGGDAAQELAEAIADQDNDVGLVNFAL NLFDIVGINQDDQSDNMIILTPSEHMLVPDFPGLPQDGCTVTFDREQALSREDAQFISWE HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLLEAIYVVEAQAPKHLQLTRFLPPTP VRMLLDAKGTNLAAQVEFESFNRQLNSINRHTSSKLVNAVQPNVHAMLQAGEALIGEQAT ALINEAKREADEKLSAELARLESLKAVNPNIRDDELETLEFNRRQVLENLDQAGWRLDAI RLIVVSHQ >gi|316918626|gb|ADCU01000015.1| GENE 82 103018 - 103764 220 248 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 45 210 83 247 287 89 32 1e-16 MASSENHKGVLHNTLINSVASGGDLALPAIKLGEYFPALEPWLHVLYQDDHIIVVNKPSG LLSVPGKAEEHKDSVMTRVQVDFPIAESVHRLDMATSGVIAVALTKAAERELKRQFRERE PKKSYIARVWGHMEHDEGLIDLPLICDWPNRPKQKVCFEHGKSAQTQYQVLSRDADGSTR VKLTPITGRSHQLRVHMLALGHPILGDKFYAHPEAKAMASRLQLHAQELQITHPEFGTPM HFRCEPDF >gi|316918626|gb|ADCU01000015.1| GENE 83 103921 - 105072 1032 383 aa, chain + ## HITS:1 COG:yjiM KEGG:ns NR:ns ## COG: yjiM COG1775 # Protein_GI_number: 16132156 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Escherichia coli K12 # 1 383 8 390 390 663 81.0 0 MSLINELPAIFDHFSDARRQGFLTVLELKEQNIPLVGTYCTFMPQEIALAAGAVVVSLCS TSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAE FKPVHVMQLPNSADGAASRALWRSEILRLQSALEQQFNCTISEQDLRAAITLKNRERAAL SSFYRLGQLNPPALSGSEILKVVYGATFKFDKNTLIDELNALSEKVRSEYQQGKRLEDRP RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEMQVSEEGDVYDALTDKYLAI GCSCISPNTQRLTLLSQMIEEYQVDGVIDVILQACHTYAVESLAIKRHVRQQHDVPYMAI ETDYSNSDIGQLNTRVSAFIEML >gi|316918626|gb|ADCU01000015.1| GENE 84 105082 - 105870 383 262 aa, chain + ## HITS:1 COG:ECs5297 KEGG:ns NR:ns ## COG: ECs5297 COG1924 # Protein_GI_number: 15834551 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Escherichia coli O157:H7 # 1 258 1 255 255 339 68.0 3e-93 MSLSIGIDSGSTATKGILLNSANGGQILRRFLAPTSFRPQEAIEQAWSQLCEGLTERPHL TLTGYGRGLIDFADKQVTEITCHGVGARFLCSEARTIIDIGGQDSKVIHLDEEGKLTDFL MNDKCAAGTGRFLEVISHTLGAQINQLDELVTGVAPHAISSMCTVFAESEVISLRSAGVA PESILSGIVYSMARRSANFIGRLGVHPQVLFTGGVSRCNAFRQHLSDTLNTPVATHSDAQ FAGAIGAALMGCRQKKRRSHAG >gi|316918626|gb|ADCU01000015.1| GENE 85 105860 - 106117 123 85 aa, chain + ## HITS:1 COG:no KEGG:KPK_4859 NR:ns ## KEGG: KPK_4859 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 5 75 4 74 118 89 59.0 3e-17 MQDEFLFLFHSTLGVVRLKKRLQAQNREFKVADIPRQLSSGCGLSIRLSCTATELAQWWV DGETSAIFRCAEGRYVPVSPPSFGQ >gi|316918626|gb|ADCU01000015.1| GENE 86 106159 - 106992 750 277 aa, chain - ## HITS:1 COG:STM0094 KEGG:ns NR:ns ## COG: STM0094 COG1076 # Protein_GI_number: 16763484 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Salmonella typhimurium LT2 # 1 277 1 270 270 400 75.0 1e-111 MQYWGKLIGLVLGLMSGTGFWGVVLGLLIGHMIDKSRQVRSSGYFSNQAQRQALFFSTTF QVMGHLTKSKGRVTEADINLASALMERMQLHGAARTAAQQAFREGKQADFPLREKLRELR SICFGRVDLIRMFLEIQLQAAFADGSLHPNERAVLYVIAEELGFSRVQFEQFLSMMEGGR QFGGGYQQQGQYQQQGGFGGYQRQTGPTLADACKVLGVKPNDDATTIKRAYRKLMSEHHP DKLVAKGLPPEMMEMAKQKAQEIQAAYDLIKKEKGFK >gi|316918626|gb|ADCU01000015.1| GENE 87 107176 - 109554 2231 792 aa, chain + ## HITS:1 COG:YPO0495 KEGG:ns NR:ns ## COG: YPO0495 COG1452 # Protein_GI_number: 16120825 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Organic solvent tolerance protein OstA # Organism: Yersinia pestis # 1 792 1 780 780 1084 68.0 0 MKKSIPTLVATLVWSALYSQNALADLAEQCLLGVPMYNKPLVSGNPNDLPVHIQADKSDA NYPDNAVFSGNVNIEQGNSTLTADQVQLDQKFLKDKPDPLRTVTATGNVNYSDNQVKLKG PNAWSNLNNKDTNVWQGDYQFVGRQGRGTADLMKTRAENRYTILENGTFTSCLPGDNSWS VAGSEIIQDRQEEVAEIWNARFKIGPVPVFYSPYLQLPLGDKRRSGFLIPDFKYSSTDGV EFSLPWYWNIAPQVDATITPHYMENRGLQLQNEFRYLTVAGSGLMELDWLNQDKQYADDR LNKNNISDAENDKKRWLFYWQHSGVMDQVWRFNVDYTKVSDPYYFNDLDSTHGSSTDGYA TQKFSLGYAEQNWNATLSTTQFQVFADAGNSNSYRAEPQLDLNYYKNDIGPFDLHMYGQA VKFTNESDNQPEADRYHFEPTIDLPWSNGWASVNTETKLLATHYQQTVPDSYYTTNRSAA HLADSVNRVMPEFKVDSKVTFDRDMDWAQGYTQTLEPRAQYLYIPYRDQSDIGVYDSTLL QMDYTGLFRDRIYSGLDRIASANQMSTGLTTRIYDDALVERFNASLGQIYYFERSRTGDE TLSTDKDKDTGSLVWAGDSYWKITDHWGIRGGLQYDTRLNSVALGDAIMEYRKDAETMIQ LNYRYASPEYVTAMIPRYASNDLYNQGISQVGTIGSIPIADRWALVAAYYYDTNANQTAD SLVGLQYNTCCWSVGVNYERKITSWDSTASQPNSKYDNKFSFTFALRGLGTNYSLGTADM LQKGILPYQRAF >gi|316918626|gb|ADCU01000015.1| GENE 88 109663 - 110961 1415 432 aa, chain + ## HITS:1 COG:YPO0494 KEGG:ns NR:ns ## COG: YPO0494 COG0760 # Protein_GI_number: 16120824 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Yersinia pestis # 1 432 1 432 434 628 76.0 1e-180 MKNWRTLILGVAFCANTAFAAPQVVDKVAAVVDNGVVLESDVDGLMQSVKLNAREAGQQL PDDATLRHQILERLIMDNIQLQMAKKMGIDINDADVDRAIGNIAQQNHMSLDQMRSRLAA DGINYKTYRDQIRKEMLISEVRNNEVRRRVTILPQEVEALAKQVGAQNGADTELNLSHIL IALPENPSQQQVDDAEQQARQLVDQLNKGADFGKMAVSYSADSQALKGGQMGWGKIQELP SLFAAALQTAKKGDIIGPIRSGVGFHILKVNDLRGGQGNVSVTEVHARHILLRPSPVMTD DQARAKLQEIAQQIKSKQITFDEAARAVSQDPGSALKGGDLGWAVPTMYDPAFRDALMKL QKGELSAPVHSSFGWHLIQLLDTRQVDRTDDAQKDRAYRMLFNRKFAEEAQTWMQEERAS AYVKIIDGSNAQ >gi|316918626|gb|ADCU01000015.1| GENE 89 110951 - 111958 447 335 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 12 335 9 332 346 176 32 5e-43 MPSNSSHDTFRVVITPGEPAGVGPDLVIALAQQAWPAELVVCADPALLLERAQWLKLPLT LREYQPHEPARPQDANTLTILPIALHSQAVAGQLDVNNGTYVVDTLARACDGCLSGEFAA LITGPVHKGIINDAGVPFTGHTEFFADRSHCARVVMMLATEELRVALATTHLPLLEVPAA ITAQTLDEVITILHHDLRTKFGIREPQIYVCGLNPHAGEGGHMGREEIDVIIPTLESLRQ KGLHLIGPLPADTLFQPKYLAHADAVLAMYHDQGLPVLKYQGFGRAVNITLGLPFIRTSV DHGTALDLAATGLADVGSFRTALNLAIKMINNSNE >gi|316918626|gb|ADCU01000015.1| GENE 90 111951 - 112763 740 270 aa, chain + ## HITS:1 COG:YPO0492 KEGG:ns NR:ns ## COG: YPO0492 COG0030 # Protein_GI_number: 16120822 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Yersinia pestis # 1 268 1 268 272 457 84.0 1e-128 MNNRVHQGHLARKRFGQNFLTDQYVIDSIVSAIHPMPGQAVVEIGPGLGALTEPVADRMD KMTVIELDRDLAARLATHPFISSKLNIRQQDAMTVDFGELSQELGQPLRVFGNLPYNIST PLMFHLFTYTGAISDMHFMLQKEVVNRLVAGPNSKAYGRLTVMAQYYCQVIPVLEVPPTA FRPAPKVDSAVVRLIPHATIPHPVKDIRVLSRITTEAFNQRRKTVRNSLGHLFTPEQLTE LGIDPALRAENISVENYCKLANWLCEKSPE >gi|316918626|gb|ADCU01000015.1| GENE 91 112840 - 113217 343 125 aa, chain + ## HITS:1 COG:YPO0491 KEGG:ns NR:ns ## COG: YPO0491 COG2967 # Protein_GI_number: 16120821 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein affecting Mg2+/Co2+ transport # Organism: Yersinia pestis # 1 125 1 125 125 210 81.0 6e-55 MIDSPRVCVQVQSAYAETQSLPDEERFVFAYTITIRNLGRFNVQLLRRYWLITNGNGRQT EVQGEGVIGEQPLILPNNEFQYTSGAIIETPCGTMEGHYEMIDHQGQEFRIAIPVFRLAI PTLIN >gi|316918626|gb|ADCU01000015.1| GENE 92 113275 - 114108 665 277 aa, chain + ## HITS:1 COG:YPO0490 KEGG:ns NR:ns ## COG: YPO0490 COG0639 # Protein_GI_number: 16120820 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Yersinia pestis # 1 271 1 270 289 457 78.0 1e-129 MSTLLIGDVHGCYAELRALLEQADFDPAKDTLWLTGDLVARGPDSLEVLRYVQSLGDSVR MVLGNHDLHLLAVYAGISRNKPKDQITPLLDAPDADSLINWLRRQPILQVDDKLKLVMAH AGISPQWDIATAQLCAREVEAVLSSDSYPLFLNAMYGDMPNSWIDGLTGLQRLRFSTNAL TRMRYCFPGGELDMICKDAPGEAPSPLKPWFDLPSKVLDAGYSIAFGHWASLQGKGTPSQ VYALDTGCCWGGELTMLRWDDKQYFTQPSLRPKEIEQ >gi|316918626|gb|ADCU01000015.1| GENE 93 114731 - 115273 221 180 aa, chain + ## HITS:1 COG:ECs5278 KEGG:ns NR:ns ## COG: ECs5278 COG3539 # Protein_GI_number: 15834532 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 31 179 28 166 167 66 30.0 2e-11 MKNRLWKSTSGLFLLAALSSTASAAGDQTAVMVTANVVASPCVVLSPNLTIPLGNIEAST LESANVYTAWSEMTSTATIKLANCPAGTTEVLMTFTGPPDPNGGVGSFLNMDTGTGAATN VSVQLKPSGSTDPIRNNEVMDIPIETGAALIPLSARLYTKSGGVTPGRVSSVINVAFSYK >gi|316918626|gb|ADCU01000015.1| GENE 94 115294 - 115635 219 113 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFNRACSQWLTLFFPLALSEFGYTEEPSIQGDNAEVNISATITESVCTVINPSSDTNSVH LGKMRSADIHDDCSAGQSMPFYIELVNCPTLQIHKMWRLIPRDMLPHTPLKPE >gi|316918626|gb|ADCU01000015.1| GENE 95 115729 - 116397 326 222 aa, chain - ## HITS:1 COG:no KEGG:ECL_01130 NR:ns ## KEGG: ECL_01130 # Name: not_defined # Def: putative DNA-binding transcriptional regulator # Organism: E.cloacae # Pathway: not_defined # 18 222 5 207 207 95 29.0 1e-18 MREFETNMTVGSSVQPMAKPLKAISRLMSLFRTESVPLVFENEDCIVRLHNPSGELHVLL VVEGLVDAYRTSDELLFATAAAPAIFGMQGSAYRYDMYTFQSNPDSKLETLPLTRAIELV AQHGLLEDLLAYQIYFNDYQAYRNNLLINKSAYEIVCALLFELEKIPADKRAHISVLNFI LARSHLARSGIMKILANLRQGLYINIENGKLISIIRKFPKEY >gi|316918626|gb|ADCU01000015.1| GENE 96 117086 - 117433 98 115 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDKLINKDFSAETFVTFETPDDKFTQQHVAIRQALGENITLLKSDSYFALLSIIENSDKL GVMPQWLYEKFSPSFNVTALDQGKKMPSISIHLIYDKSSPISSIAGDIISVLSAQ >gi|316918626|gb|ADCU01000015.1| GENE 97 118023 - 118565 359 180 aa, chain + ## HITS:1 COG:Z4971 KEGG:ns NR:ns ## COG: Z4971 COG3539 # Protein_GI_number: 15804092 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 EDL933 # 1 180 1 178 178 80 38.0 2e-15 MSFKKTTFCLALSLAGLASASVMAADGTVNFKGKISDAPCSVSIPSSNQVVDLGTVPAAD LNASGLKSTAKNFQIDLLNCSAAAKSVTVTFGGSSPTGKDALFNISSPDGTAAGTVATNV GIEVADSKGVDIKPNVASSSITLTPSIASQSLYFTANYQAYGVATTGDANATSDFTLTYQ >gi|316918626|gb|ADCU01000015.1| GENE 98 118699 - 119391 472 230 aa, chain + ## HITS:1 COG:STM3639 KEGG:ns NR:ns ## COG: STM3639 COG3121 # Protein_GI_number: 16766925 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 8 230 10 232 232 199 45.0 3e-51 MYGKLIISSLALLIASQSAFAAGSGGIVLGATRVVYDANNKEASITINNKNSDQYFLVQS WIDDENGNKKVPFAITPPLFRLDAEKENMMRILKTAGDLPSDRESVFYINVKAIPPVPEN TNAQNTLQLAIKTRIKMFYRPKGLTGNPAESGKQLQWSHQGNDLVVKNPTNYSVSFNEIN LSGKALKDINMVLPKSETHYAWPAGAGNNVTFAFINDYGGVSELISATAN >gi|316918626|gb|ADCU01000015.1| GENE 99 119439 - 122093 2057 884 aa, chain + ## HITS:1 COG:Z4968m KEGG:ns NR:ns ## COG: Z4968m COG3188 # Protein_GI_number: 15804998 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 EDL933 # 21 879 9 857 857 762 46.0 0 MLLKISKKSHSAPSHSLHKESYRYFSLSALTLLIMSANGYAAGGFDPAFLEQIDSSNEVT DLSTYALPEGGQIPGKYVVDIYLNKNPVDHREVTFIAYKEPNANDKTGLIPCFTEEELKD YGIKTDAALAMIKKGTDSPMPAATKDNTDTATQPADSAKCNLLLQAIPSAKTNFDFSNQR LNISVPQLLVSNSARGYVDPSMWDDGIPALLLNYNFTGANDSDDQSNYYLNLRSGLNLGA WRLRNYSTWNDNNGVRQFTNVNTYVQRSIAALKADLTLGDSYSGSDVFDSVQFRGVQLAS DDDMVPDSQKNFAPVIRGIAKTNAQVTVEQNGYMVYQSYVTPGAFEITDLYPSSDGGDLT VKIKEEDGSTQTFIQPYSSVPILQREGHTKFSLTAGQYRNGYGSDKPDFAQFTLIHGFSK GITLYGGMQATENYTAAALGYGQNLGSFGAISVDVTQARTQLPDTNSSQGQSYRFLYAKT FAETDTDLRLVGYRYSTSGFYSLDDSVILNDQNNDYTDYNIRTHKRSRIESSLNQQLGED AGSLYVSASMQDYYDDSSKEQTLQAGYSNTWNGISYNIAYSDNYISNEDQKHDKQISFSV SIQLDRWVKSAWANYSVNHGSDGRVQQMAGVSGTLLDDNNLSYSVSESYANQGEGDSGNA NLNYQGQYGNSNVGYSYSKDTRRVNYGVQGGIVAHSEGITLSQPLGETVALVSASGADNT KILNNIGVKTDFRGYAVVPYISPYRRTRVSLDTTSLGDKVEIEESAKDVIPTRGAVVRAR FNAHVGYRVMMTLTRSDGKSLPFGATVALIDESADKAGNDNANAGIVGEQGVTYLSGLPE KGSLIAQWGKGVNQQCKINYQLSQQDLENSILTAAATCQPGEVK >gi|316918626|gb|ADCU01000015.1| GENE 100 122095 - 123099 456 334 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWNISVLKKIRFNYASILLLPVILFCNTSFADCQTNVPIELPGTTKTIYVSRDYSDPVMR GNYVLSTLNVTFTCQYNDEAPSAGLRTSPTGSFDPSSPFGPDFEGHTAVALTGGGLGIEV YETPEGRSPVWFGSFLSTPNAGFPASQSFNVEFGVDLVSLNNGSMVTAGAHSFSGQLGTL YFKQTTQSIPVIMGAFNLNVIFTSCQLNASEANLSWTNLSSADIISGVVPPQTASVGADC GDVPTPVAITFSSSRGYVNAAQGIVKTDSDGSNNLGLQLSWVSTGQPINMNETTHATIKA QQFDVSAKPVAINSGAPVKSGDYNGTVTMMFSYR >gi|316918626|gb|ADCU01000015.1| GENE 101 123115 - 123639 402 174 aa, chain + ## HITS:1 COG:fimG KEGG:ns NR:ns ## COG: fimG COG3539 # Protein_GI_number: 16132140 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 30 174 29 167 167 63 30.0 2e-10 MKKLLSYGMSFSLFLLAMQSGMATEVNNFTINYSIGVRPATCEVNTSKVDIVFEDAIGAN MLETLGNMTEWNSGHSIELTNCEPGLKINMWMAGTPDQDVQFYKNEGTANNIMIELSGDE KNISYQNGSVQVFQLQPQQTAISIPLKARLLNNGNGAATPGTVRAVVTATFSYN >gi|316918626|gb|ADCU01000015.1| GENE 102 123711 - 124244 327 177 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQYKKLSLLSTFAVVGMISAVNAQAAADTTINITATVTASPCTVKAPSTINIGFTLDASE VATAGVDSIASGTANIALSGCPSTTTSIDATFSGPPVAGDNSGFGMKDSGGTIVTTGSIR LANADTSAVISNTANTYTVTPSGGAATFKLKAYMHSITGSVKPGVYTTPIEVTYAYH >gi|316918626|gb|ADCU01000015.1| GENE 103 124264 - 124791 197 175 aa, chain + ## HITS:1 COG:ydeR KEGG:ns NR:ns ## COG: ydeR COG3539 # Protein_GI_number: 16129462 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 174 1 166 167 84 32.0 1e-16 MRIFNSRLQISAYCITATLLLHAMPCMADADTNLAVNATVTASPCALVATPEVDLGAYTS SNLTTAGSTTTWVPFKVDLEKCPSTSTTVTLTLGGTTDPVYTQYYKNTGTSTNVVIDVVN DADGKALNPGTSTKINIDPKTHTASFPMKAQMVSPQGGATSGTVTGQMELTFFYG >gi|316918626|gb|ADCU01000015.1| GENE 104 124963 - 125886 177 307 aa, chain + ## HITS:1 COG:STM0606 KEGG:ns NR:ns ## COG: STM0606 COG0583 # Protein_GI_number: 16763983 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 2 293 6 297 300 107 25.0 4e-23 MDEKKLDLNLLPIFIEIYIHQSITKAGITLGLSTTAVSNALTKLKSHFGDPLFLREGLNL APTKIAHELFSYLQDDVDKLVRNVNSFGKINNFSQISVHCSPYISTRLLADVSNIIWQKN PDCEIIHRSNFSDTKNNIQGVRLRMNDLFFDLKPNLSRSMINTAVLDDPLCLFCSKQHPR INQLLCGDVSHETFIAFETPDEKFNPQKFHIRKTFGERLTLLKSDSCFALLSIIEDSDKV GVLPKWLYGKFSQSFDVAMIDSSNQLPSASIYMIYNKSNGMSDIAESIVSHLSPTRIAAP VALKNVN >gi|316918626|gb|ADCU01000015.1| GENE 105 125958 - 126440 548 160 aa, chain - ## HITS:1 COG:YPO0486 KEGG:ns NR:ns ## COG: YPO0486 COG0262 # Protein_GI_number: 16120816 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Yersinia pestis # 1 160 1 160 160 278 81.0 4e-75 MNISLIAALAADRVIGMENAMPWHLPADLAWFKRNTLDKPVIMGRKTFESIGRPLPGRHN IVLSSQAGTDDRVTWVVSPEAAIAAAGDVEEVMVIGGGSIYSQFLPLAQRMYLTHVDAEV GGDTYFPDYEPDEWETTFSEFHDADSANSHGYCFEILHKR >gi|316918626|gb|ADCU01000015.1| GENE 106 126563 - 127114 370 183 aa, chain - ## HITS:1 COG:YPO0485 KEGG:ns NR:ns ## COG: YPO0485 COG3610 # Protein_GI_number: 16120815 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 30 183 1 151 151 221 81.0 8e-58 MGDGFVADPSNLYWCGDGDVVVGAKRMDLIDLLLALLQDMILAAVPAVGFALVFNVPVRA LRYCALLGAIGHGSRMLMMHFGINIEWSTLGAAILIGVLGIQWSRRLLAHPKVFTVAAVI PMFPGIYAYTAMISVVKISHRGFSDALFETMVTNFLKASFIVGALSIGLSLPGLWLYRKR PSV >gi|316918626|gb|ADCU01000015.1| GENE 107 127027 - 127803 525 258 aa, chain - ## HITS:1 COG:ECs5324 KEGG:ns NR:ns ## COG: ECs5324 COG2966 # Protein_GI_number: 15834578 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 3 258 22 277 277 407 75.0 1e-113 MDVDSDRQRELTRLCIQCALFLLQHGAESMLVEQLSSRLGIALGAESVESSISANAVVLS TIINGHCMTSTRKNVDRGINMHVVTEVQHIVIMAEHHLLDIKDVRRRFEHIKPLRYPRWL LVLMVGLSCGCFCKLNGGGWDGSVVAFIASAVAMYVRQVLTQRQMHPQINFCITAFVATS VSGLLIQYDPFKTTSTIAMAASVLLLVPGFPLINAVADMFKGHVNTGLARWAMASLLTLA TCIGVVMAMSLWGLRGWI >gi|316918626|gb|ADCU01000015.1| GENE 108 127968 - 128582 533 204 aa, chain + ## HITS:1 COG:YPO0483 KEGG:ns NR:ns ## COG: YPO0483 COG1280 # Protein_GI_number: 16120813 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Yersinia pestis # 1 203 1 203 204 277 77.0 8e-75 MLETTLFVASIATLGMLSPGPDFFLVIKNAARYRRQAGMMTALGVICGVATHMSYCVAGL AVVITTTPWLFNILKYAGAAYLVWIGIHALLSRGGSKIHLDSQAPLNVSLKSAFLQGYLC NLLNPKATLFFLAVFTQVLEVNSGFIEKLWYAGIILGLSFIWWPMLVILIQSAPVRRALA KAQKIIDRLLGVMLIGLGLKVALS >gi|316918626|gb|ADCU01000015.1| GENE 109 128627 - 130513 1008 628 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 7 560 9 569 618 392 38 1e-108 MDNHGMMIEGLIYLGSAALFVPLAVRLGLGSVLGYLIAGCIIGPWGLRLVSDAESILTFA EIGVVLMLFVIGLELDPKRLWTLRASVFGGGSIQMVGCGLVLSLFCYLLGLSWQVALLIG LTLALSSTAIAMQAMSERNLTPSPVGRSSFAVLLFQDIAAIPLVAMIPLLASSGATTTMG AFAMSAAKVVGALAVVILLGRYVTRPLLHFVARSGMREVFSAVALFLVFGFGVLLEMAGM SMAMGAFLAGVLLASSEYRHALESDIQPFKGLLLGLFFIGVGMSIDFGTLFSHPLLIATL LFGFLILKGVLLWLAAPILGVPRKQRALFAVLLGQGSEFAFVVFGAAQMAGVLPAEWAKS LTLAVALSMAVTPILLVIYSRLEKNVKQEERPQDIIDDENASVIIAGFGRFGQIAGRLLL ANDVHTVVLDHDPDHVETLRKFGMKVFYGDATRVDLLESAGAAKAKVLINAIDDVDANLQ LTELAQEHFPHLKIIARARDVDHYYQLRQRGVEFVERELFEGSLRVGRNVLEHLGCGAYE AREKADIFRRYNVQMLEDTVPNYEDVEFRLASLQRAKEMLSQAIEHDKARLTIAQQSGWR GSIDGKSPDLDPMVTIHEEDVPKFQKEA >gi|316918626|gb|ADCU01000015.1| GENE 110 130506 - 131078 329 190 aa, chain - ## HITS:1 COG:yabF KEGG:ns NR:ns ## COG: yabF COG2249 # Protein_GI_number: 16128040 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli K12 # 1 174 1 174 176 244 64.0 1e-64 MILIIYAHPYPRHSHANKRLLDAVSNIPEVKVRSLYDLYPDFNINVAAEQQALSQADLII LQHPMQWYSVPPLLKLWMDKVLEHGWAYGHNGKALEGKDFMWAVTTGGNDRHFDLGDHPT FPVLSQPIQATALYCGMNWLPYFAEHNTFSCDEPALIRASESYRRRLMNYLMLHAETELP STDAEEPTHG >gi|316918626|gb|ADCU01000015.1| GENE 111 131311 - 134535 3515 1074 aa, chain - ## HITS:1 COG:YPO0482 KEGG:ns NR:ns ## COG: YPO0482 COG0458 # Protein_GI_number: 16120812 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Yersinia pestis # 1 1073 1 1073 1077 2044 94.0 0 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA DAIDKAEDRRRFDIAMKKIGLDTARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGTGGG IAYNREEFEEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGAAGFDPKVSLDDPEA LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEERVAEVG INGLSYEFLRQLKRKGFADARLAKLAGVAETEIRKLRHKYNLHPVYKRVDTCAAEFATDT AYMYSTYEEECESNPNNDRPKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN CNPETVSTDYDTSDRLYFEPVTLEDVLEIVAVEKPQGVIVQYGGQTPLKLARALEAAGVP VIGTSPDAIDRAEDRERFQQAVVRLGLKQPANATVSTIEQAIEKGAAIGYPLVVRPSYVL GGRAMEIVYDEIDLRRYFQNAVSVSNDAPVLLDHFLDDAVEVDVDAICDGERVLIGGIME HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQAEKLAMELGVRGLMNVQFAVKDNEVYLI EVNPRAARTVPFVSKATGVPLAKVAARVMAGQTLAQQGITKEVIPPYYSVKEVVLPFNKF PGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGSQSKVKTPGRALLSVREGDKHRVVDL AAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYSYIVNTTAGR QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNSDPTDQVISVQEMHARLKG >gi|316918626|gb|ADCU01000015.1| GENE 112 134554 - 135636 921 360 aa, chain - ## HITS:1 COG:ECs0035 KEGG:ns NR:ns ## COG: ECs0035 COG0505 # Protein_GI_number: 15829289 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Escherichia coli O157:H7 # 1 350 36 381 382 610 83.0 1e-174 MTGYQEILTDPSYSRQLVTLTYPHIGNVGTNASDEESSAVHAQGLIIRDLPLIASNYRST ESLSDYLKRHNVVAIADIDTRKLTRLLREKGAQNGCIITGSVDGSLPDVQLALEKARAFP GLKGMDLAKEVTTRESYAWTQGSWTLMGDLPAAKEASELPFHVVAYDYGVKRNILRMLVD RGCRLTVVPAQTPAEDVLKLNPDGIFLSNGPGDPEPCDYAIRAIKTFLDTDIPVFGICLG HQLLALASGAKTIKMKLGHHGGNHPVKDLDKNVVMITAQNHGFAVDGDNLPQTLRITHTS LFDHTVQGIHRTDKAAFSFQGHPEASPGPHDAAPLFDHFIDLIQNYRSTGSVNTPAVNAK >gi|316918626|gb|ADCU01000015.1| GENE 113 136212 - 137033 903 273 aa, chain - ## HITS:1 COG:YPO0480 KEGG:ns NR:ns ## COG: YPO0480 COG0289 # Protein_GI_number: 16120810 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Yersinia pestis # 1 273 1 273 273 384 75.0 1e-107 MSNSQIRIAVAGAGGRMGRQLISAVANTDGVVLGAAFEREGSSLLGVDAGELAGIGKTGV VVSSSLQDAADSFDVLIDFTRPEGTLSHLEFCVKQHKNMVIGTTGFDDAGKAAIRQAAES IAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGETIAQ ALGRDLKECAVYSREGYTGERDPKSIGFATIRAGDIVGEHTAMFADVGERIEITHKASSR MTFASGAVRAAAWIGTRATGLYDMRDVLSLNEL >gi|316918626|gb|ADCU01000015.1| GENE 114 137547 - 139832 1821 761 aa, chain + ## HITS:1 COG:ygeS KEGG:ns NR:ns ## COG: ygeS COG1529 # Protein_GI_number: 16130768 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli K12 # 9 759 2 752 752 1093 70.0 0 MSLGSPLKRVDAEAKVTGRARYTDDHQMPGMRYAKYVRSPVAHAKVTAIDTSAALAMPGV EAIFTFKDVPELLFPTAGHAWSLEAAKRDVADRSLLTQHVRHFGDGVAIVVARDALTAER AAALVDVTYQELPVITNAQAALAEGATPIHPTGNILKKSDISANQPTEAISAADLQLCAH FQTPVIQHCHMESVTCFAYMEQPDHIVIVSSTQIPQIVRRTVAQALGLPWSNIRVIKPYI GGGFGNKQDVLEEPMAAFLTLKMGGIPVKVELSREECFFASRTRHAFSIDAKLGLNKDGI LTGYQLDVLSNTGAYASHGHSIASAGANKISYLYPRSAFGYSALTHYSNYPAAGAMRGYG APQVAFALECLLDDAAEKLALDAVEVRLLNAARSGDINPVNHKTIYSAGLVECLEKGRDM FEWDARKAECLQQNGDVRRGIGVACFSYGSNTYPVGVEIAGARMLLNQDGTVNLQIGATE IGQGSDTVFAQMAAETLGLPFEHIRVISTQDTDITAYDPGAFASRQSYVAAPAVRQAATE LRSKILAHAELISHQPQWGLTLLDGNVVMAAQPEMVLMSVADVSMHAYYHQEIGAQLLAE ISHKTTTNPPAFGCTFVDLTIDIPLCKVTINKILNMHDSGRILNPQLAEGQVHGGMGMGI GWALFEEMIIDEKTGVVRNPNLLDYKFPTIMDLPDLDCAFVDTYEPQSAYGHKALGEPPI ISPAPAIRNAIRMATGVAINTLPITPKTLFNEFVLAGLIRE >gi|316918626|gb|ADCU01000015.1| GENE 115 139835 - 140713 717 292 aa, chain + ## HITS:1 COG:ygeT KEGG:ns NR:ns ## COG: ygeT COG1319 # Protein_GI_number: 16130769 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli K12 # 1 292 1 292 292 363 63.0 1e-100 MYDIESYHRARNVQHACELLTEHPQARLLAGGTDVLIQLHHLNPKYRHIVDIHDLAELKG ITLDRHNHLRIGSATTFTEIIEHPLIQQHLPLLAEAAATIAGPQVRNVATFGGNICNGAT SADSASPTLALKAELEIATQSGSYKRSIEGFHTGPGKVALQQGEIVVAFHFAPAYYQNIG SSYIKYAMRGAMDIATIGCTAVCRIAEGRFTELRLTYGVAAPTPIRCPQAENCAIGQPIT QQTLAAVSEAVAQDVSPRSSWRAEKSFRLHLIRTLAQRAITLAVERAGGHIQ >gi|316918626|gb|ADCU01000015.1| GENE 116 140710 - 141186 361 158 aa, chain + ## HITS:1 COG:ygeU KEGG:ns NR:ns ## COG: ygeU COG2080 # Protein_GI_number: 16130770 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs # Organism: Escherichia coli K12 # 1 155 1 155 159 206 67.0 1e-53 MKHKNWVDIECQINGKTYQFCLSPAMSLMELLREQGLTSVKQGCGVGECGACTVLIDGVA TDSCLYLAVWADGKQIRTAEGEVRNGEISKVQQAYVNAGAVQCGFCTPGLVMATTALLAK HTSRPLTHEEIRRGLAGNLCRCTGYQMVIRAVDACRDE >gi|316918626|gb|ADCU01000015.1| GENE 117 141446 - 142429 759 327 aa, chain - ## HITS:1 COG:AGc1537 KEGG:ns NR:ns ## COG: AGc1537 COG1506 # Protein_GI_number: 15888182 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 34 256 60 271 321 82 29.0 1e-15 MEGYKYFSKRVMTLMVLVASVFVSACDNSAATPESLSSARAKFKTEIVDTSFQGDGEPAT PPADIFSLVSYPAQDGKMAAFLTPDPHDGKKHPAVIWLVGGYGGIGSDDFFWTEQDRSND QSGSAFRKSGLVMMVPSFRGENANPGKYEMFYGEIDDLESARKYLASQPYVDPNRIYLAG HSTGGTRVLLGSEYLTGFRAAFSLGGIPDLKKRIEGGKMMVAVPFNQNNPEEFRLRSPGE FITSIKSPTFYFEGEEYFWPEFDDLNVVAKEKSIPLHIYKIDGGDHFNIITPITEMIAQK ILQDTEDKVNISFSDGDLRTIQNGISH >gi|316918626|gb|ADCU01000015.1| GENE 118 142487 - 143434 434 315 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Desulfotomaculum acetoxidans DSM 771] # 1 300 1 286 676 171 34 2e-41 MQILLANPRGFCAGVDRAISIVERALEIYGAPIYVRHEVVHNRYVVNSLRERGAVFIEEI SEVPDNTILIFSAHGVSQAVRAEAKARNLTMLFDATCPLVTKVHMEVARASRKGTEAILI GHAGHPEVEGTMGQYSNPEGGMYLVESPEDVWKLQVKNEANLCFMTQTTLSVDDTSDIID ALRERFPQIIGPRKDDICYATTNRQEAVRNLAAEAEVVLVVGSKNSSNSNRLAELAQRAG IPAFLIDSAEDIRKEWLDGVNCIGVTAGASAPDILVQEVIKRLQALGGEGSVEMQGREEN IVFEVPKELRVKLLD >gi|316918626|gb|ADCU01000015.1| GENE 119 143415 - 143885 259 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90022209|ref|YP_528036.1| ribosomal protein S2 [Saccharophagus degradans 2-40] # 5 145 8 147 151 104 38 3e-21 MTQQVQSNSAVLVHFTLQLEDGTQAESTRSSGKPALFRLGDGSLSDALEEHLLGHKVGDK FQFTLQPQDAFGENSPDLVQFFTRRDFADVGVPEAGTIMMFTGRDGSEMPGIVREVACDS VTVDFNHPLAGHPVAFDVEVLEIDPQQGDVDANPAG >gi|316918626|gb|ADCU01000015.1| GENE 120 143891 - 144391 493 166 aa, chain - ## HITS:1 COG:STM0047 KEGG:ns NR:ns ## COG: STM0047 COG0597 # Protein_GI_number: 16763437 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Salmonella typhimurium LT2 # 5 163 1 159 166 276 89.0 1e-74 MVGAMKRPMMSTGLRWLWLVLVVLVIDLGSKYLVLQEFALGETKVLLPSLNLHYARNYGA AFSFLADSGGWQRWFFAGIAIGICVVLLVMMYRSSATQKLNNIAYALIIGGALGNLFDRL WHGFVVDMIDFYVGDWHFATFNLADSAICVGAALIVLEGFLPKKKG >gi|316918626|gb|ADCU01000015.1| GENE 121 144391 - 147192 2959 933 aa, chain - ## HITS:1 COG:YPO0475 KEGG:ns NR:ns ## COG: YPO0475 COG0060 # Protein_GI_number: 16120804 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Yersinia pestis # 1 933 17 938 938 1639 82.0 0 MRGDLAKREPGMLQRWYEQDLYGIIRNAKKGKKTFILHDGPPYANGSIHIGHSVNKILKD IIIKSKGLSGFDSPYIPGWDCHGLPIELKVEQLIGKPGEKFSAAEFRAKCREYAAEQVEG QKADFKRLGVLGDWDHPYLTMAFDTEANIIRALAKIVDNGHLMKGAKPVHWCPDCGSSLA EAEVEYYDKTSPSIDVRFAAVNKDEVLAKFGVKDVEGNVSVVIWTTTPWTMPANRAISLH PDFEYQLVQVDGECLILAADLVESVMKRAGITSWVVLGSCKGADLELQRFQHPFMGFDVP IVLGEHVTLEAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPNGCYLKGTFPGLDGLFV FKANDVVVELLKEHGALLHVEKLNHSYPCCWRHKTPIIFRATPQWFISMDQKGLRKQSLA EIDEIEQVGLKENGLSGWIPAWGKARIESMVANRPDWCISRQRTWGVPMSMFVHKETQEL HPRTTELMEEVAKRVEKDGIQAWWDLDPKDILGADADQYEKVPDTLDVWFDSGSTSFSVV DARPEFHGHTADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSK SIGNTVSPQDVMNKLGGDILRLWVASTDYTGEIAVSDEILKRSADSYRRIRNTARFLLAN LNGFDPKQHMVKPEDMVVLDRWAVERAMEAQKEILVSYENYDFHEVVQRLMQFCSVEMGS FYLDIIKDRQYTTKADSIARRSCQTALYHIAEALVRWMAPIMSFTADELWGYLPGDRAEF VFTEEWYQGLFGLGDSESMNNDFWAELLKVRGEVNKVIEQARNDKRVGGSLEASVTLYAD DDLMAKLNSLEDELRFVLITSGAQVEALANAPADAVQSDVLKGLKVALSKADGQKCPRCW HFSTKIGQSAEHPELCPRCVINVAGHGEQRKFA >gi|316918626|gb|ADCU01000015.1| GENE 122 147333 - 148271 405 312 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 1 306 1 312 317 160 33 4e-38 MELIRGIHNLRARHHGCVLTIGNFDGVHRGHQALLTRLKQEGKRLGLPVMVMIFEPQPLE LFSADKAPARLTRLRDKCHYLADAGVDYLLCVRFNRDFAANSAHDFVKKLLVEKLGVKYL MVGDDFRFGAGREGDYELLKLAGAQFGFTVTNSDSFCEGNKRISSTAVRQALQEDKLDLA ESLLGHPYSISGRVVHGDEVGRTMGFPTANLPLKRLVAPVKGVYAVDVYGLGPTPLPGVA NIGTRPTVAGIRQQLEVHLLDTTMDLYGRHIDVVLRAKLRNEQRFASLDALKQQIANDVV TARAFFGLATPV >gi|316918626|gb|ADCU01000015.1| GENE 123 148680 - 148943 403 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|22127576|ref|NP_670999.1| 30S ribosomal protein S20 [Yersinia pestis KIM] # 1 87 1 87 87 159 91 7e-38 MANIKSAKKRAVQSEKRRKHNASRRSMMRTFLKKVYAAIATGDKAAAQNAFNEMQPIVDR QACKGLIHKNKAARHKSNLVAQINAMQ >gi|316918626|gb|ADCU01000015.1| GENE 124 149012 - 149914 876 300 aa, chain - ## HITS:1 COG:YPO0471 KEGG:ns NR:ns ## COG: YPO0471 COG0583 # Protein_GI_number: 16120800 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 299 1 298 299 542 86.0 1e-154 MRLAHINFNHLYYFWQVCKEGSVVGAAEALFLTPQTITGQIKALEERLGGKLFKRQGRGL VPSELGQLVFRYADRMFMLSQEMLDIVNYRKESNMLFDVGVADALSKRLVSQVLETAVAD HEQIHLRCFESTHEMLLEQLSQHKLDMILSDCPVDSSQQEGLFSVKLGECGVSFFCRQPL PEQSFPACLEQRKLLIPGRRTMLGRKLLNWFNSQGLTVQILGEFDDAALMKAFAQFHDAI FVAPSIYAQDMYANESDNIKEVGRIDNLQEEYYVIFAERMIQHPAVQRVCNKDFSALFSR >gi|316918626|gb|ADCU01000015.1| GENE 125 150151 - 151332 1046 393 aa, chain - ## HITS:1 COG:YPO0470 KEGG:ns NR:ns ## COG: YPO0470 COG3004 # Protein_GI_number: 16120799 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Yersinia pestis # 2 388 1 387 394 484 76.0 1e-136 MVTRAIRQFLRLEAAGGIILIMAAIVALVLANSPLQGLYQQFLDSPVQFRFMALDINKTL LLWVNDALMAIFFLVVGLEVKRELMCGSLASRDKAVFPAIAALGGMLAPALIYLAFNHAD PVTSQGWAIPAATDIAFALGVMALLGKRVPTSLKVFLLALAIIDDLGVIVIIALFYTHEV SLSALGVAAASIAVLGYLNWRGVGKSSVYLLVGAVLWTAILKSGVHATLAGVIVGFMLPI KAKNGKRPAEKLEHSLHPWVAYLILPLFAFVNAGVSLQGVSLGDLTGVLPAGIMMGLFVG KPLGIFLFSWVAVKIGIARLPGGINFRHIFAVSVLCGIGFTMSIFIASLAFVGGAPELAT YSRLGILLGSTASALVGYMLLRRVLPRRAADEE >gi|316918626|gb|ADCU01000015.1| GENE 126 151555 - 152682 1122 375 aa, chain - ## HITS:1 COG:YPO0469 KEGG:ns NR:ns ## COG: YPO0469 COG0484 # Protein_GI_number: 16120798 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Yersinia pestis # 1 375 1 379 379 644 91.0 0 MAKRDYYEVLGVSRDAEEREIKKAYKRLAMKFHPDRNQDTDAEEKFKEVKEAYEILTDAQ KRAAYDQYGHAAFEQGGMGGGGGYGGGADFSDIFGDVFGDIFGGGRRQRATRGADLRYNM ELTLEEAVRGVTKEIRIPTLVECEVCHGSGAKKGTDPVTCPTCHGAGQVQMRQGFFTVQQ PCPHCHGRGQIIKDPCNKCHGHGRVEKSKTLSVKIPAGVDTGDRIRLSGEGEAGEHGAPA GDLYVQVQVKAHPIFEREDNNLFCEVPINFAMAALGGEIEVPTLDGRVKLKIPAETQTGK MFRMRGKGVKSVRGGSQGDLLCRVVVETPVNLNEKQKQLLRELEDSFGDSSSANNSPRSK SFLDGVKKFFDDLTR >gi|316918626|gb|ADCU01000015.1| GENE 127 152806 - 154716 2255 636 aa, chain - ## HITS:1 COG:YPO0468 KEGG:ns NR:ns ## COG: YPO0468 COG0443 # Protein_GI_number: 16120797 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Yersinia pestis # 1 636 1 636 636 1027 92.0 0 MGKIIGIDLGTTNSCVAVMDGTTARVLENAEGDRTTPSIIAYTQDGEILVGQPAKRQAVT NPQNTLFAIKRLIGRRFEDEEVQRDKGIMPFGIVAADNGDAWVEVKGQKIAPPQISAEVL KKMKKTAEDFLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG LDKEVGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL VEEFKKEQGMDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADASGPKHMNIKV TRAKLESLVEDLVNRSMEPLKVALKDAGLSVSDVQDVILVGGQTRMPMVQKKVADFFGKE PRKDVNPDEAVAIGAAVQGGVLTGEVKDVLLLDVTPLSLGIETMGGVMTSLIAKNTTIPT KHSQVFSTAEDNQSAVTIHVIQGERKRAADNKSLGQFNLDGIQPAPRGMPQIEVTFDIDA DGILHVSAKDKNSGKEQKITIKASSGLNEEEIQKMVRDAEANAEADRKFEELVQTRNQAD QLVHGTRKQLEEAGDKLPAEDKTAIEAALAELDTAAKGEDKADIEAKIQTLVQASSKLLE MAQQQAQAGGAQQADTSAQKDDDVVDAEFEEVKDKK >gi|316918626|gb|ADCU01000015.1| GENE 128 155231 - 155830 590 199 aa, chain + ## HITS:1 COG:YPO0467 KEGG:ns NR:ns ## COG: YPO0467 COG1584 # Protein_GI_number: 16120796 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 186 1 186 203 266 83.0 2e-71 MHTNKLANPGPLGLMGFGMTTVLLNLHNAGFFPLTSVIISMGIFFGGFAQILAGLLEYKK GNTFGLTAFTSYGAFWLSLVGILLLPKMGLADASDASFLGTYLALWGIFTLFMFFGTLGA NRILQFVFASLTVLFFLLAYGNITGNAAVLHFAGFEGIVCGASAIYLAMAEVINEQAGRT VLPIGECKCHKANAHPAEL >gi|316918626|gb|ADCU01000015.1| GENE 129 155916 - 157409 890 497 aa, chain - ## HITS:1 COG:nanT KEGG:ns NR:ns ## COG: nanT COG0477 # Protein_GI_number: 16131114 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 482 11 492 506 789 84.0 0 MNNTTQDLPWYRHISKPQWKAFSAAWIGYLLDGFDFVLIALVLTEIQSEFGLTTVEAASL ISAAFISRWFGGLLLGAMGDRYGRKLAMITSIVLFSVGTLACGFAPGFTTMFIARLMIGM GMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVLSAQVYSVVVPVWGWRALFFIG ILPIIFALWLRKNIPEAEDWEKKFGNKQPVKTMVDILYRGPYKVMNVGMTIVASLALYLC FAGDIGNPFAITVLGLLCAAIFISFMVQSSGNRWPTGVMLMVVVLFAFLYSWPIQALLPT YLKTELAYDPSTVAHILFFSGFGAAVGCCVGGFLGDWLGTRKAYVYSLLLSQLLIIPVFA IGGGSLWTLGILLFLQQMLGQGISGILPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPI LGATIAQRLDLGTALASLSFSLTFVVILLIGLDMPSRVQRWLKPEGIRTHDTIDGKPFSG AIGRIPKKALVEPVAHK >gi|316918626|gb|ADCU01000015.1| GENE 130 157496 - 158395 1047 299 aa, chain - ## HITS:1 COG:STM3339 KEGG:ns NR:ns ## COG: STM3339 COG0329 # Protein_GI_number: 16766634 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Salmonella typhimurium LT2 # 1 296 1 296 297 501 81.0 1e-142 MSKHLHGVMPALLTPFNPQQQLDIPSLRRLVQFNIAQGVDGLYVGGSTGEAFIQSAQERE QVLEVVAEEAKGKVTLIAHVGGISTHESQVLAKAAKRYGFDAVSAVTPFYYPFSFAEHCD HYRAIIDSAEGLPMVVYNIPALSGVKLSLDQISTLITLPGVAALKQTSGDLYQMEQVRRA HPDKVIYNGYDEIFLSGLLAGADGGIGSTYNVMGWRYKGIMQALKEGNIARAQALQTECN KVIDVLIKVGVFRGLKTILHYMDVVDTPICRKPFAPVEEQYLPELRQLAQLLSAERTAK >gi|316918626|gb|ADCU01000015.1| GENE 131 158582 - 159346 647 254 aa, chain - ## HITS:1 COG:STM3340 KEGG:ns NR:ns ## COG: STM3340 COG2186 # Protein_GI_number: 16766635 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 254 4 257 263 375 79.0 1e-104 MSTSDDRPIETPEAIGHAMRRRPVSRKKLSDMVEEELEQMIRRREFAEGEQLPSERELMA FFNVGRPSVREALAALKRKGLVQINNGERARVCRPSADTIISELSGMAKDFLTKPDGIAH FEQLRLFFESSLVRYAAEFATDEQIARLGKALEMNSQSLDDNDLFIRSDIEFHRELAEIP GNPIFMVIHVALLDWLIAARPTVSLAELHAHNNVSYQQHIEIYKAICARQPDAADKALKS HLNSVFAAYYARKK >gi|316918626|gb|ADCU01000015.1| GENE 132 159575 - 160909 1213 444 aa, chain - ## HITS:1 COG:YPO0465 KEGG:ns NR:ns ## COG: YPO0465 COG0477 # Protein_GI_number: 16120794 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 2 431 25 452 462 649 82.0 0 MEQHHNRRLNRQDYKTLTLAALGGALEFYDFIIFVFFAAVVSDLFFPVDMPEWLRQVQTF GIFAAGYLARPLGGIIMAHFGDKVGRKKMFSLSILLMALPTLAMGMLPTYQSIGIAAPLL LLLMRVLQGAAIGGEVPGAWVFVAEHVPRKRVGFACGTLTAGLTAGILLGSLVATLLNTV MSQESILAGGWRIPFFLGGIFGLFAMYLRRWLQETPIFVEMQVRKALAEEMPLKTVVKNH RKEVAISMLLTWLLSAGIVVVILMTPTYLQKQFGISPALALQANCLATIALTMGCVIAGR VIDRFGASKTFIVGSLFLAVCSWTFYHSVAVGVSAEQLFLGYALAGFSVGIVGAVPYVMV RAFPAEVRFSGISFSYNVAYAIFGGLTPIFVTLIMKLTPMAPAYYVLALSLVGLLLGLYL QRDLNSEAHAESLLDVSINQQKQS >gi|316918626|gb|ADCU01000015.1| GENE 133 161075 - 161662 683 195 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 [Burkholderia pseudomallei 305] # 6 191 2 191 194 267 72 2e-70 MNALRIGLVSISDRASSGVYQDKGIPALQEWLEQALTTEFTLETRLIPDEQVMIEQTLCE LVDEMGCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHYVPTAILSRQV GVIRKQALIINLPGQPKSIKETLEGVKDENGKSIVHGIFASVPYCIQLLDGPYVETDPRV IAAFRPKSARRETIN >gi|316918626|gb|ADCU01000015.1| GENE 134 161659 - 162315 529 218 aa, chain - ## HITS:1 COG:BMEI1105 KEGG:ns NR:ns ## COG: BMEI1105 COG0637 # Protein_GI_number: 17987388 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Brucella melitensis # 4 211 9 214 227 137 38.0 1e-32 MWRKQFAAVFLDMDGTLLDSGNHAEQVWMQWAQRHGIDNALLGAQIHSQRVQEIVRRLAP HLETQQELEALEQALLEMTQRHHSQLQQGVFELLQALGETPWGVVTQSSQSRAAVQMQQA GMPQPPLMIGAEQVTSGRPDPEPYLLAASYYGVDPRDCLVFESDEAGIKAAQAAGMTVIA ITNRHQRHHLQRADVVISGWRSIILHPQRQGIVIEVVA >gi|316918626|gb|ADCU01000015.1| GENE 135 163030 - 163710 768 226 aa, chain - ## HITS:1 COG:STM2794 KEGG:ns NR:ns ## COG: STM2794 COG1802 # Protein_GI_number: 16766105 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 225 1 225 225 327 78.0 8e-90 MTASLPHPTFDGYQWLKRDIIRGVYQPEEKLRMSLLTNRYGLGVGPLREALSQLVAEHLV TVVSQKGYRVAPMSQAELLDIFDARANMESMLVQLAIERGGDDWEADILARAHMLAKLEA TEASEALLDEWDQRHQAFHTAIVAGCGSQYLLQMRARLFDLAARYRFIWLRETVLSVEML ENKHHEHDQLVNVILARDGKQAGELMRQHLLTPILIIMEAMGGKVA >gi|316918626|gb|ADCU01000015.1| GENE 136 163842 - 165242 980 466 aa, chain - ## HITS:1 COG:STM2793 KEGG:ns NR:ns ## COG: STM2793 COG1113 # Protein_GI_number: 16766104 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Salmonella typhimurium LT2 # 1 466 1 466 466 724 85.0 0 MGQVAETNSLGGGLKSRHVTMLSIAGVIGASLFVGSGVAISQAGPAVLLSYLFAGLLVLL IMRMLGEMAVASPDTGSFSTYAERSIGKWAGYTIGWLYWWFWVLVIPLEANIAAIILNSW LPVVPIWLFSLLITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIVLGTIAITGFYPH VQVSGISRLWDHGGFMPNGFGAVISAMLITMFSFMGAEIVTIAAAESDTPDKHIVRATNS VIWRIAIFYLCSIFVVVALVPWNAPELKTIGSYSSVLQLLHIPHAKLIMDCVILLSVTSC LNSALYTASRMLYSLSHRGDAPAFMGKTNRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVF NFLIASSGAIALLVYLVIAVSQLRMRKILLMRGQEIKLKMWLYPYLTWTVILFITFVLVV MMFRPEQRVEVVSTVLLGIGIICTVPIMTRWKTLFQWQKQPQQSLR >gi|316918626|gb|ADCU01000015.1| GENE 137 165384 - 166667 1159 427 aa, chain - ## HITS:1 COG:gabT KEGG:ns NR:ns ## COG: gabT COG0160 # Protein_GI_number: 16130576 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Escherichia coli K12 # 1 426 1 426 426 780 88.0 0 MSTNKELMQRRGNAVPRGVGQIHPIFAERAENCRVWDVEGREYLDFAGGIAVLNTGHLHP KVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNKRVPGDFAKKTLLVTTGSEAVENAVK IARAATKRSGTIAFSGAYHGRTHYTLSLTGKVNPYSAGMGLMPGHVFRALYPCELHGVSD DDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYSASPDFMKRLRALCDEHGIMLIADE VQSGAGRTGTLFAMEQLGVAADITTFAKSIAGGFPLAGVTGKAEVMDAIAPGGLGGTYAG SPIACAAALAVLDTFDEENLLQRANDVGQKLKEGLLSIAETHREIGDVRGLGAMIAIELF EDGDVHKPNAKLTAEVVARARDKGLILLSCGPYYNVLRILVPLTVSDAQIKQGLDIIAEC FTEAKKN >gi|316918626|gb|ADCU01000015.1| GENE 138 166785 - 168233 1349 482 aa, chain - ## HITS:1 COG:gabD KEGG:ns NR:ns ## COG: gabD COG1012 # Protein_GI_number: 16130575 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 482 1 482 482 854 89.0 0 MQLNDHKLFRQQAFIQGEWRDASHQQTIDVTNPANGQLLGTVPKMGADETRAAIEAANQA LPAWRALTAKERAVILRRWFDLMMANQDDLAKLMTLEQGKPLAEAKGEIAYAASFIEWFA EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK PASQTPFSALALAELAQRAGIPAGVFNVVTGSASEVGNELTGNALVRKLSFTGSTEIGRQ LMQQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG VYDAFAEKLQAAVEKLTLGDGLTQGVTTGPLIDEKAVAKVKEHIEDALSKGARIITGGKP HDLGGNFFQPTILVNVPSSAKVAKEETFGPLAPLFRFNDEADVIAQANDTEFGLAAYFYA RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL >gi|316918626|gb|ADCU01000015.1| GENE 139 168282 - 169541 955 419 aa, chain - ## HITS:1 COG:ECs3521 KEGG:ns NR:ns ## COG: ECs3521 COG0579 # Protein_GI_number: 15832775 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli O157:H7 # 1 408 23 431 444 694 83.0 0 MYDFVIVGGGIIGMSTAMQLIGVYPDARIAVLEKESGPARHQTGHNSGVIHAGVYYTPGS LKAKFCLEGNRATKAFCDETGIRYDTCGKMLVATSALEMERMRALWDRTEANGLERYWLS AEELHEREPNIVGLGGILVPSSGIVSYTEVTAAMAERFRAAGGEIFYNAEVTALQEHAQG VIVSTTQGEYEGSNLITCSGLMADRLVKMLGIDPGFIICPFRGEYFRLAPQHNQIVNHLI YPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDISLSDTLEILGSSGIRSV MRQNLKSGLDEMKNSLCKSGYLKRVQKYCPSLTKNDLQPYPAGVRAQAVSPDGKLIDDFL FVTTARSIHVCNAPSPAATSAIPIGTHIVSKVQALLAGQTHLGRSLTANIKDKTAFAVP >gi|316918626|gb|ADCU01000015.1| GENE 140 169628 - 170605 797 325 aa, chain - ## HITS:1 COG:no KEGG:KPN_00258 NR:ns ## KEGG: KPN_00258 # Name: csiD # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 325 14 338 338 536 78.0 1e-151 MNALTAVKQDISEAKANGQGFTVRPSAQSPRMLELNFDATTIQRFLSLVEEWPVQALEYK SFLRFRVAKILNELCAEQLQPLLLNTILSRSQGALLIGADGIDHVEQADEMVKIATAVAH LIGRSNYDAMSGQFYARFVVKNVDSSDSYLRQPHRVLELHNDGTFVDEVTDYVLMMKIDE QNMQGGNSLLLHLDDWESLDKYFSHPLARRPMRWTAPPSKNVSQDVFHPVFDVDGLGRPV MRYIDQFVQPKDFEEGNWLSELSDALEGSRNIVSVPVPVGKLLLINNLFWLHGRDRFTPH PELRRELMRQRGYISYSTSHYQTGQ >gi|316918626|gb|ADCU01000015.1| GENE 141 171052 - 172005 1116 317 aa, chain - ## HITS:1 COG:ECs0008 KEGG:ns NR:ns ## COG: ECs0008 COG0176 # Protein_GI_number: 15829262 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 570 89.0 1e-162 MTDKLTSLRQLTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDEAIAWAR NQSNDKAQQVVDASDKLAVNIGLEILKLVPGRISTEVDARMSYDTEASVAKAKCLIKMYN DAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVYLISPFVG RILDWYKANTDKKEYAPNEDPGVVSVTEIYEYYKQHGYETVVMGASFRNMGEILELAGCD RLTIAPALLKELSEAQGDVERKLSYTGEIKARPARLTEAEFYWQHNQDPMAVDKLSDGIR KFAVDQGKLEKMIADLL >gi|316918626|gb|ADCU01000015.1| GENE 142 172484 - 173917 848 477 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 [Haemophilus influenzae PittAA] # 1 442 3 440 456 331 39 2e-89 MTDLINFINSILWGSVLIYLLIGTGLFFTIRTGFIQFRHFGHMFSVLKNSNKSDTAGISS FQALCTSLAARVGTGNLTGVAIAITAGGPGAIFWMWVVAIIGMSTSFIESTLAQLYKTKD DQGNYRGGPAYYMEKGLGMRWMGVLFSIFLIIAFGLVFNAVQSNSIAQATAVAFGVQPFY VGIGLVILSGAIIFGGLRSIAKTAELIVPFMAIAYLLLAFWVVGHNLSRMPEVIMLIFRS AFGLQEAAAGAVGYGIAQAMTQGIQRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQM FGVFVDTLVICSATAAIILSSGALEHTSGSISGIELTQRALSSAVGGWGTIFIATAIFFF GFTSIIANYSYAESNLIFLEHNHPAGLMLFRCCTLGMVMFGTLAELPLVWKMADLSMAMM AITNLIAILLLSGVALKLAKDYNHQRSIGRLPTFDISQYPEIQQQVEPGIWDRPKSE >gi|316918626|gb|ADCU01000015.1| GENE 143 174047 - 174826 769 259 aa, chain + ## HITS:1 COG:YPO0462 KEGG:ns NR:ns ## COG: YPO0462 COG3022 # Protein_GI_number: 16120791 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 258 1 256 258 402 79.0 1e-112 MLIIISPAKTLDYESPLATTRFTQPELLDHSAELMEYCRELTPAQIGSLMKISDKLAGLN AARFAEWQPNFTPQNARQAILAFKGDVYTGLHAEDFSEQDFDFAQQHLRMLSGLYGLLRP LDLMMPYRLEMGIRLHNAKGNDLYSFWGDLLTEKLNQQLKEQGDDVLINLASDEYFKAVK PAKLDGQLIKPVFLDEKGGKFKVISFYAKKARGLMSRFIIQNQLTQPDQLKDFNLEGYFF DEEKIDKSGSELIFKRHEA >gi|316918626|gb|ADCU01000015.1| GENE 144 174948 - 176237 1017 429 aa, chain - ## HITS:1 COG:YPO0461 KEGG:ns NR:ns ## COG: YPO0461 COG0498 # Protein_GI_number: 16120790 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Yersinia pestis # 1 429 1 429 429 713 82.0 0 MKLYNLKDHNEQVSFAQAIKQGLGKNQGLFFPLELPEFELTEIDNLLQQDFVTRSANILS AYLGDEFSADVIYRRVKAAFAFPAPVASVEPDIAALELFHGPTLAFKDFGGRFMAQMLQE VAGNEPVTILTATSGDTGAAVAHAFYGLENVRVVILYPQGKISPLQEKLFCTLGGNIQTI AIEGDFDDCQALVKQAFDDEELKKALGLNSANSINISRLLAQICYYFEAVAQLPQEARNQ LVVSVPSGNFGDLTAGLLAKSLGLPIKRFIAATNANDTVPRFLATGQWQPHNTVATLSNA MDVSRPNNWPRVEELFRRKIWQLKELAYGHVSDDVTRQTVRELSQLGYISEPHAAIAYRV LRDTLQPGEFGLFLGTAHPAKFKEVVDEILSSDLPLPAELAERANLPLLSHQMAADFVPL RAFMMQWAK >gi|316918626|gb|ADCU01000015.1| GENE 145 176241 - 177170 724 309 aa, chain - ## HITS:1 COG:YPO0460 KEGG:ns NR:ns ## COG: YPO0460 COG0083 # Protein_GI_number: 16120789 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Yersinia pestis # 1 309 1 309 309 533 81.0 1e-151 MVKVYAPASIGNVSVGFDVLGAAVSPIDGQFLGDCVSVEAADVFSLSAKGSFVSKLPSDP KDNIVYQCWERFCQAIGHELPVAMVLEKNMPIGSGLGSSACSVVAALMALNEFAEQPLDQ TQLLALMGEMEGRISGSVHYDNVAPCYLGGLQLILEENGIISQTVPGFDEWFWVMAYPGI KVSTAEARAILPAQYHRQDCISHGRYLAGFIHACHTRQPVLAAKLMHDVIAEPYRTRLLP GFAQARQAAQDIGALACGISGSGPTLFAICDRQDTAQRMAQWLENNYLQNEEGFVHICRL DNAGARRLG >gi|316918626|gb|ADCU01000015.1| GENE 146 177172 - 179631 2221 819 aa, chain - ## HITS:1 COG:STM0002_1 KEGG:ns NR:ns ## COG: STM0002_1 COG0527 # Protein_GI_number: 16763392 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Salmonella typhimurium LT2 # 1 460 1 460 460 786 85.0 0 MRVLKFGGTSVANADRFLRVADILENNARQGQVATVLSAPAKITNHLVAMVEKTIAGQDA LPNISDAETIFADLLTGLDQAQSGFEYGRLKQLVDAEFAQIKQVLHGISLLGQCPDSVNA AMICRGEKLSIAIMAELLKARGYGVSVINPVEKLLAVGGYLESTVDIAESTRRIADEPIP ADHMVLMAGFTAGNDKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYTCDPRTV PDARLLKSMSYQEAMELSYFGAKVLHPRTIAPIAQFQIPCLIKNTANPQAPGTLIGRESG ADGVPVKGITNLNNMAMINVSGPGMKGMVGMAARVFAVMSRSGISVVLITQSSSEYSISF CIPQRELERAQSALNEEFYLELKDGLLEPLDVTEHLAIISVVGDGMRTMRGISAKFFSAL ARANINIVAIAQGSSERSISVVVNNDSATTAVRVSHQMLFNTDQVIEVFVIGSGGVGGAL IEQIHRQQSWLKNKHIDLRVCGIANSRALLTNVHGIELDRWQSELADAKEPFNLGRLIRL VNEYHLLNPVIVDCTSSQEVADQYADFLSNGFHVVTPNKKANTGSMNYYHQLRQAAAGSR RKFLYDTNVGAGLPVIENLQNLLSAGDELVQFSGILSGSLSFIFGKLEEGMSLSQATLEA KKLGYTEPDPRDDLSGMDVARKLLILAREAGYSMELNDIEVESVLPADFDAGGDTSAFLA HLPQLDDGFAERVEKARAKGAVLRYVGQIVDGRCQVKMVEADGNDPLYKVKNGENALAFY SRYYQPIPLVLRGYGAGNDVTAAGVFADLLRTLSWKLGV >gi|316918626|gb|ADCU01000015.1| GENE 147 180041 - 180727 269 228 aa, chain - ## HITS:1 COG:lasT KEGG:ns NR:ns ## COG: lasT COG0565 # Protein_GI_number: 16132220 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Escherichia coli K12 # 1 228 1 228 228 318 71.0 5e-87 MQIHIVLVAPARPENIGAAARAMKTMGFSSLRIVDSQAYLEPATRWVAHGSGDILDNAQH FNTLEAALADVDFTVATTARSRARYHYYCSPQELTGILQEKQSWTASCAIVFGREESGLS NEELALADILTGVPMVADYPSLNLGQAVMVFCYQLSSLIQNRFETQQLAEQNQLVALRHR VHRLLSALNVEDDQKLSDWLDQRLGLLAQRDTSMLHTLIHDIEKALKK >gi|316918626|gb|ADCU01000015.1| GENE 148 181056 - 181256 65 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHFPSTSTTSLGWSGDVTPYSPGGAKSGAHPNPINSNITAHTAIAIQQNYALLTYIKSNC STLTDL >gi|316918626|gb|ADCU01000015.1| GENE 149 181403 - 182119 913 238 aa, chain + ## HITS:1 COG:ECs5359 KEGG:ns NR:ns ## COG: ECs5359 COG0745 # Protein_GI_number: 15834613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 444 94.0 1e-125 MQTPHILIVEDELVTRNTLKSIFEAEGYIVHEANDGAEMHQILSEFDINLVIMDINLPGK NGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR TMNLGGGTEERKLVESYRFNGWELDINSRSLVSPNGEQYKLPRSEFRAMLHFCENPGKIQ SRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLEE >gi|316918626|gb|ADCU01000015.1| GENE 150 182260 - 183375 1302 371 aa, chain - ## HITS:1 COG:YPO3269 KEGG:ns NR:ns ## COG: YPO3269 COG0566 # Protein_GI_number: 16123426 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Yersinia pestis # 1 371 1 385 388 466 68.0 1e-131 MNDSFNGKNGKVKVMYVRSEDDSKDRDQKSRPEGKGRQGERGGRQGRSAQDGDRRNDRRG GQGRSQENDRSRRPAGANRSEGRSEGRSEGPYDRSPWKTVSRAPNEEDKPDHGGIAGKSF IDPEQLRRQRAEETRVYGENACQALFASRPDAIVRAWFVQSVTPRFREALRWMAANRKAY HVVDDEELTKASGTEHHGGVCFLIKKRNGLDARSYLKTAADTDCVLALEDVGNPHNLGGI MRTCAHFGVKGLMVQDASMLESGAAVRTAEGGAEHIQAIDADGFDGALDEFRRAGYTIVT TSSHKGTTPLTKATLPKKMVLVLGQERDGLSETVMQQGDLSLSIGGTGQVESLNVSVATG ILLAEWWRQNA >gi|316918626|gb|ADCU01000015.1| GENE 151 183646 - 184077 356 143 aa, chain + ## HITS:1 COG:YPO3270 KEGG:ns NR:ns ## COG: YPO3270 COG0526 # Protein_GI_number: 16123427 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Yersinia pestis # 1 140 1 140 145 241 77.0 4e-64 MNTVCPSCQTTNRLPEERIEDQAKCGRCGHELFDGEVINATSATLDKILQDELPVLIDFW APWCGPCQGFAPVFEEVAEERAGQIRCVKVNTEAEPELSARFRIRSIPTIMLYQNGQLVD MLNGAVPKAPFDGWINEQLATKA >gi|316918626|gb|ADCU01000015.1| GENE 152 184381 - 184902 461 173 aa, chain + ## HITS:1 COG:YPO3271 KEGG:ns NR:ns ## COG: YPO3271 COG3148 # Protein_GI_number: 16123428 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 164 73 236 249 211 65.0 6e-55 MMYDTEPMKPSNTGRLIADILPNTAAFQWARTEVDPALLTLLNSPDYQPYVVFPGSYAPE RAVTTLDTSMNAKPPLFIMLDGTWREATKMFRKSPYLDKFPVFSLEAKLESDYTLRESAR DDQHCTAEVAAALLDIAGDSEAALGLQQHFTYFRRQYLLGKPHHREEVTAENI >gi|316918626|gb|ADCU01000015.1| GENE 153 184947 - 187622 1568 891 aa, chain + ## HITS:1 COG:STM2651_1 KEGG:ns NR:ns ## COG: STM2651_1 COG1042 # Protein_GI_number: 16765971 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Salmonella typhimurium LT2 # 1 709 1 709 709 1037 72.0 0 MSQRSLESLLRPKSIAVIGASNKVGRNGHLIMQNLLKGGFSGPVMPVTPRYQAVCGVLAY PDIESLPFAPDLAILCINAKRNIEVIAALGKKGCRAAIVLSSPNAQAQELKSCAQQHNVR LLGPNSLGLLAPWQKMNASFSPVPILPGKLAFISQSAAVSNTILDWAQQREIGFSLFIAL GDSLDIDVDDLLDFLARDSKTSAILIYLEHLHDARRFLSAARSASRNKPILVIKSGRSPQ AQQLLNSVQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLSHMHPLRGEKILIISNGAAP AAMSVDELLRRNGKLATLDEETLTVLRSKMPEDVYLKNPIDLRDDATPARYQVAISTLLD SHCYDAVLIIHAPSAAAPATATAETVIQALKQHPRGKRISVLTNWSGEFSSQEARRLFSE AGIPTYRTPEGAITAFMHMVEYRRNQRQLMETPALPAALIANPTQAHDLIQQAMKEGIYH LDTHEVRSILSHYGLHTLPTWIANDSTEAVHIAEQVGYPVALKLRSPDIPHKSDVQGVML YLRNASEVEQAANAIIDRVKHAYPQARIHGLLVQSMANRAGSQELRILVDNDPVFGPLIM LGEGGGTWDPDHDAAVALPPLNMTLARYLIMQAIKGGKIRGRSPLQPLNIDGLSQLLVQV SDLIVDCPEITRLDIHPVLASADDFTLLDVSLQLMPFAGDAENRLAIRPYPQHLEENVTL RNGATCLLRPILPEDEPLLQQFIQKVTKEDLYYRYFSEINEFTHEDLAKMTQIDYDREMA FVAVIQEEGRDAIIGVTRALSDPDNHEAEFAVLVRSDCNGLGLGKTLLSKMIAYSTQHGL EKLVGITMPNNQGMIGLARKLGFQVDIQIEDGIVNLCLPLGNLTQEHTEFC >gi|316918626|gb|ADCU01000015.1| GENE 154 187755 - 189110 719 451 aa, chain + ## HITS:1 COG:YPO3273 KEGG:ns NR:ns ## COG: YPO3273 COG1502 # Protein_GI_number: 16123430 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Yersinia pestis # 1 431 2 432 452 699 76.0 0 MLSKFKRTKHQQHLAQLPKLPQTVEDVQTLFTPEAFRLALIDAISNASRRIYITALYLEN DDGGRDVLNALYSAKQQHPDLEIYVLVDWHRAQRGRIGAAATNTNADWYCAMADQHPGIS VPIYGVPVNTREALGVLHLKGFIVDDQVIYSGASLNDVYLHRHDKYRYDRYHFIKNSRLA DTMSAYIQNKLLTDPAVQRLDRDDRPKSPEIRNETRQFRHGLRSCGYDVAAIASNDELAV TPLAGLGKHSVLNKTIHHLMCSTEEKVTLCTPYFNMPALLVRNIIYLLRQGKQVEIIVGD KKANDFYIPEDEPFKIIGALPYLYEINLRRFMSRLQRFVDNGQLIVRLWKDEDNTYHLKG MWIDDQWQLITGNNLNPRAWRLDLENAVLIHDPKHQLHDQRQNELECIRTNTHIVRSYLE LETIQQYPLKVRKLIRRLRRIRIDRLISRIL Prediction of potential genes in microbial genomes Time: Wed May 18 15:25:07 2011 Seq name: gi|316918327|gb|ADCU01000016.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.16, whole genome shotgun sequence Length of sequence - 330550 bp Number of predicted genes - 304, with homology - 291 Number of transcription units - 182, operones - 64 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 17 - 76 4.7 1 1 Tu 1 . + CDS 222 - 599 167 ## UTI89_C4570 hypothetical protein + Term 612 - 650 3.6 - Term 604 - 632 1.0 2 2 Op 1 10/0.039 - CDS 641 - 2299 1528 ## COG4147 Predicted symporter 3 2 Op 2 5/0.182 - CDS 2296 - 2607 269 ## COG3162 Predicted membrane protein 4 3 Tu 1 . - CDS 2729 - 4687 1837 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - Prom 4865 - 4924 6.4 + Prom 5346 - 5405 2.5 5 4 Tu 1 . + CDS 5427 - 6731 1282 ## COG1301 Na+/H+-dicarboxylate symporters + Term 6790 - 6840 -0.7 6 5 Tu 1 . - CDS 6814 - 8769 1416 ## COG3284 Transcriptional activator of acetoin/glycerol metabolism - Term 8858 - 8898 9.4 7 6 Tu 1 . - CDS 8930 - 10411 1439 ## COG1538 Outer membrane protein - Prom 10612 - 10671 3.1 + Prom 10500 - 10559 5.7 8 7 Op 1 8/0.052 + CDS 10630 - 11289 668 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 9 7 Op 2 7/0.091 + CDS 11307 - 11732 285 ## COG3151 Uncharacterized protein conserved in bacteria 10 7 Op 3 7/0.091 + CDS 11821 - 12648 574 ## COG1409 Predicted phosphohydrolases 11 7 Op 4 7/0.091 + CDS 12651 - 13235 410 ## COG3150 Predicted esterase 12 8 Tu 1 . + CDS 13344 - 15239 1878 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 15260 - 15300 6.9 + Prom 15284 - 15343 3.4 13 9 Op 1 40/0.000 + CDS 15405 - 16115 578 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 16189 - 16227 1.2 + Prom 16153 - 16212 2.1 14 9 Op 2 1/0.597 + CDS 16339 - 17574 916 ## COG0642 Signal transduction histidine kinase 15 9 Op 3 . + CDS 17600 - 18850 1170 ## COG1653 ABC-type sugar transport system, periplasmic component 16 9 Op 4 . + CDS 18853 - 19389 -9 ## EC55989_0515 hypothetical protein - Term 19371 - 19415 7.6 17 10 Op 1 4/0.234 - CDS 19438 - 19875 501 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Term 19882 - 19917 4.1 18 10 Op 2 13/0.000 - CDS 19921 - 20781 665 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 19 10 Op 3 13/0.000 - CDS 20771 - 21556 899 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 20 10 Op 4 1/0.597 - CDS 21612 - 22085 463 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 22166 - 22225 4.8 21 11 Op 1 7/0.091 - CDS 22277 - 23005 426 ## COG2188 Transcriptional regulators 22 11 Op 2 . - CDS 23005 - 24183 866 ## COG2222 Predicted phosphosugar isomerases - Prom 24225 - 24284 3.8 + Prom 24218 - 24277 3.0 23 12 Tu 1 . + CDS 24439 - 26718 2373 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Prom 26854 - 26913 4.2 24 13 Tu 1 . + CDS 26936 - 27682 658 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 27702 - 27738 4.0 + Prom 27712 - 27771 3.3 25 14 Tu 1 . + CDS 27809 - 29227 1143 ## COG2132 Putative multicopper oxidases + Term 29240 - 29277 4.6 + Prom 29304 - 29363 4.9 26 15 Tu 1 . + CDS 29407 - 31848 1799 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 31861 - 31892 4.8 27 16 Tu 1 . - CDS 31888 - 32727 689 ## COG1414 Transcriptional regulator - Prom 32760 - 32819 10.3 + Prom 32748 - 32807 10.0 28 17 Tu 1 . + CDS 33031 - 36714 3283 ## COG1410 Methionine synthase I, cobalamin-binding domain + Term 36805 - 36856 2.1 - Term 37097 - 37145 2.6 29 18 Tu 1 . - CDS 37231 - 38181 730 ## COG0385 Predicted Na+-dependent transporter - Prom 38213 - 38272 1.8 30 19 Tu 1 . - CDS 38300 - 39649 1267 ## COG0527 Aspartokinases 31 20 Tu 1 . - CDS 40200 - 42002 1353 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters 32 21 Tu 1 . + CDS 42336 - 43985 1516 ## COG0166 Glucose-6-phosphate isomerase + Term 44012 - 44056 8.8 - Term 44007 - 44038 1.5 33 22 Tu 1 . - CDS 44113 - 45360 892 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 45469 - 45528 4.8 + Prom 45348 - 45407 5.4 34 23 Tu 1 . + CDS 45601 - 46008 476 ## COG3223 Predicted membrane protein - Term 46169 - 46203 3.1 35 24 Op 1 20/0.000 - CDS 46255 - 47145 956 ## COG3833 ABC-type maltose transport systems, permease component 36 24 Op 2 19/0.000 - CDS 47162 - 48733 1227 ## COG1175 ABC-type sugar transport systems, permease components - Term 48795 - 48843 2.7 37 24 Op 3 . - CDS 48853 - 50043 1353 ## COG2182 Maltose-binding periplasmic proteins/domains + Prom 50306 - 50365 2.6 38 25 Tu 1 5/0.182 + CDS 50555 - 51664 1130 ## COG3839 ABC-type sugar transport systems, ATPase components 39 26 Op 1 . + CDS 51771 - 53063 1323 ## COG4580 Maltoporin (phage lambda and maltose receptor) + Term 53077 - 53111 6.7 40 26 Op 2 . + CDS 53162 - 54121 781 ## YPO3710 maltose regulon periplasmic protein + Term 54152 - 54183 3.2 + Prom 54216 - 54275 3.6 41 27 Op 1 6/0.117 + CDS 54330 - 54845 399 ## COG3161 4-hydroxybenzoate synthetase (chorismate lyase) 42 27 Op 2 . + CDS 54882 - 55739 631 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases + Term 55768 - 55795 1.5 - Term 55756 - 55783 1.5 43 28 Tu 1 . - CDS 55811 - 58288 2357 ## COG2937 Glycerol-3-phosphate O-acyltransferase - Prom 58470 - 58529 4.1 + Prom 58330 - 58389 4.6 44 29 Tu 1 . + CDS 58473 - 58838 395 ## COG0818 Diacylglycerol kinase + Term 58871 - 58900 2.8 - Term 58855 - 58892 8.0 45 30 Op 1 5/0.182 - CDS 58920 - 60383 1267 ## COG0471 Di- and tricarboxylate transporters 46 30 Op 2 5/0.182 - CDS 60415 - 61335 644 ## COG1767 Triphosphoribosyl-dephospho-CoA synthetase 47 30 Op 3 7/0.091 - CDS 61307 - 61861 607 ## COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) 48 30 Op 4 6/0.117 - CDS 61865 - 63397 1404 ## COG3051 Citrate lyase, alpha subunit 49 30 Op 5 6/0.117 - CDS 63408 - 64316 1155 ## COG2301 Citrate lyase beta subunit 50 30 Op 6 5/0.182 - CDS 64313 - 64558 198 ## COG3052 Citrate lyase, gamma subunit 51 30 Op 7 . - CDS 64606 - 65682 805 ## COG3053 Citrate lyase synthetase - Prom 65907 - 65966 8.4 + Prom 65892 - 65951 8.3 52 31 Op 1 9/0.052 + CDS 66074 - 67735 1142 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism 53 31 Op 2 . + CDS 67704 - 68402 242 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 + Prom 68481 - 68540 7.3 54 32 Tu 1 . + CDS 68568 - 69176 784 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) + Term 69217 - 69244 -0.9 + Prom 69200 - 69259 1.6 55 33 Tu 1 . + CDS 69285 - 70619 813 ## COG0534 Na+-driven multidrug efflux pump + Term 70642 - 70706 0.6 56 34 Tu 1 . + CDS 70965 - 71174 325 ## COG3237 Uncharacterized protein conserved in bacteria + Term 71304 - 71348 11.2 - Term 71298 - 71328 3.0 57 35 Tu 1 . - CDS 71363 - 71872 340 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 71897 - 71956 4.0 - Term 71967 - 72018 13.1 58 36 Op 1 . - CDS 72050 - 72352 304 ## - Prom 72411 - 72470 2.7 59 36 Op 2 . - CDS 72474 - 72635 181 ## - Prom 72668 - 72727 5.9 60 37 Tu 1 . - CDS 72757 - 73362 466 ## COG1309 Transcriptional regulator + Prom 73573 - 73632 6.6 61 38 Tu 1 . + CDS 73691 - 74704 953 ## COG0042 tRNA-dihydrouridine synthase + Term 74734 - 74769 5.1 + Prom 74752 - 74811 2.4 62 39 Tu 1 . + CDS 74864 - 75088 237 ## gi|258638997|ref|ZP_05731728.1| phage shock protein G + Term 75164 - 75197 3.7 - Term 75352 - 75403 6.3 63 40 Tu 1 . - CDS 75517 - 76503 962 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 76540 - 76599 2.6 + Prom 76487 - 76546 7.6 64 41 Op 1 9/0.052 + CDS 76603 - 78012 1325 ## COG0305 Replicative DNA helicase 65 41 Op 2 . + CDS 78093 - 79172 1119 ## COG0787 Alanine racemase + Term 79181 - 79241 12.2 66 42 Tu 1 . - CDS 79238 - 80395 1301 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family - Prom 80529 - 80588 4.2 + Prom 80494 - 80553 4.0 67 43 Op 1 . + CDS 80602 - 81513 641 ## COG2207 AraC-type DNA-binding domain-containing proteins 68 43 Op 2 . + CDS 81545 - 82828 840 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 82861 - 82886 -0.5 - Term 82829 - 82887 2.4 69 44 Op 1 4/0.234 - CDS 82895 - 83221 451 ## COG3171 Uncharacterized protein conserved in bacteria 70 44 Op 2 . - CDS 83221 - 83937 651 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 84016 - 84075 7.1 + Prom 83972 - 84031 4.0 71 45 Op 1 11/0.026 + CDS 84252 - 85316 1098 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 72 45 Op 2 6/0.117 + CDS 85343 - 85615 329 ## COG2924 Fe-S cluster protector protein + Term 85634 - 85673 3.8 73 46 Tu 1 . + CDS 85687 - 86778 889 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Term 86680 - 86717 -0.7 74 47 Tu 1 . - CDS 86833 - 87291 473 ## COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain - Prom 87318 - 87377 2.1 75 48 Tu 1 . - CDS 87404 - 88072 408 ## COG0625 Glutathione S-transferase - Prom 88116 - 88175 5.9 - Term 88143 - 88182 7.5 76 49 Op 1 10/0.039 - CDS 88226 - 89548 1452 ## COG0531 Amino acid transporters - Prom 89606 - 89665 1.8 - Term 89558 - 89608 1.2 77 49 Op 2 . - CDS 89668 - 91830 2093 ## COG1982 Arginine/lysine/ornithine decarboxylases - Prom 91926 - 91985 4.7 - Term 91926 - 91976 -0.8 78 50 Tu 1 . - CDS 92156 - 92260 60 ## - Prom 92341 - 92400 8.9 + TRNA 92855 - 92930 84.1 # Phe GAA 0 0 - Term 93202 - 93230 2.1 79 51 Tu 1 . - CDS 93267 - 94079 521 ## COG2990 Uncharacterized protein conserved in bacteria - Term 94522 - 94560 4.1 80 52 Op 1 4/0.234 - CDS 94561 - 96960 1377 ## COG4458 Uncharacterized protein conserved in bacteria, putative virulence factor 81 52 Op 2 . - CDS 96960 - 99917 1868 ## COG4457 Uncharacterized protein conserved in bacteria, putative virulence factor 82 52 Op 3 . - CDS 99936 - 101261 495 ## Dd586_2050 putative virulence effector protein - Prom 101293 - 101352 2.9 + Prom 101945 - 102004 7.6 83 53 Tu 1 . + CDS 102081 - 102713 568 ## COG3637 Opacity protein and related surface antigens + Term 102772 - 102797 -0.5 + Prom 102813 - 102872 4.7 84 54 Op 1 . + CDS 102911 - 103837 624 ## COG2066 Glutaminase 85 54 Op 2 . + CDS 103852 - 104580 875 ## YE3439 hypothetical protein + Term 104591 - 104634 11.0 - Term 104579 - 104620 10.6 86 55 Op 1 . - CDS 104622 - 105752 714 ## EcE24377A_1167 glucans biosynthesis protein - Prom 105792 - 105851 2.6 - Term 105806 - 105836 0.2 87 55 Op 2 3/0.325 - CDS 105894 - 106694 807 ## COG1349 Transcriptional regulators of sugar metabolism 88 55 Op 3 . - CDS 106732 - 107628 559 ## COG0524 Sugar kinases, ribokinase family - Prom 107796 - 107855 5.0 + Prom 107820 - 107879 3.0 89 56 Op 1 . + CDS 107919 - 108803 754 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 90 56 Op 2 . + CDS 108866 - 109729 891 ## COG0191 Fructose/tagatose bisphosphate aldolase 91 56 Op 3 . + CDS 109753 - 110796 890 ## COG2017 Galactose mutarotase and related enzymes 92 56 Op 4 . + CDS 110823 - 112169 1347 ## COG2407 L-fucose isomerase and related proteins + Term 112190 - 112238 0.4 93 57 Op 1 3/0.325 + CDS 112264 - 114294 1617 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases 94 57 Op 2 3/0.325 + CDS 114352 - 115794 1142 ## COG2211 Na+/melibiose symporter and related transporters + Term 115806 - 115839 -0.3 95 57 Op 3 . + CDS 115886 - 117277 557 ## COG2211 Na+/melibiose symporter and related transporters + Term 117309 - 117352 8.1 + Prom 117305 - 117364 1.7 96 58 Tu 1 . + CDS 117391 - 118080 468 ## ECL_05109 putative porin + Term 118093 - 118126 5.2 97 59 Tu 1 4/0.234 - CDS 118115 - 118834 689 ## COG1349 Transcriptional regulators of sugar metabolism - Term 118844 - 118894 2.0 98 60 Op 1 5/0.182 - CDS 118917 - 119342 327 ## COG4154 Fucose dissimilation pathway protein FucU 99 60 Op 2 4/0.234 - CDS 119344 - 120807 1120 ## COG1070 Sugar (pentulose and hexulose) kinases 100 61 Op 1 3/0.325 - CDS 121025 - 122815 1789 ## COG2407 L-fucose isomerase and related proteins 101 61 Op 2 . - CDS 122866 - 124185 878 ## COG0738 Fucose permease - Prom 124385 - 124444 7.9 102 62 Op 1 5/0.182 + CDS 124793 - 125440 539 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 103 62 Op 2 . + CDS 125479 - 126627 1131 ## COG1454 Alcohol dehydrogenase, class IV + Term 126674 - 126713 8.5 - Term 126660 - 126700 5.7 104 63 Op 1 . - CDS 126806 - 127378 611 ## COG3247 Uncharacterized conserved protein - Prom 127422 - 127481 3.5 - Term 127546 - 127574 1.0 105 63 Op 2 . - CDS 127600 - 128826 1285 ## COG0477 Permeases of the major facilitator superfamily - Prom 128969 - 129028 7.2 106 64 Tu 1 . - CDS 129043 - 129342 337 ## Spro_2188 cupin 2 domain-containing protein + Prom 129489 - 129548 5.2 107 65 Tu 1 . + CDS 129696 - 130613 476 ## COG3781 Predicted membrane protein - Term 130629 - 130657 0.6 108 66 Op 1 . - CDS 130678 - 131148 519 ## ROD_05131 hypothetical protein 109 66 Op 2 . - CDS 131218 - 131400 232 ## 110 66 Op 3 31/0.000 - CDS 131400 - 132407 1035 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 111 66 Op 4 . - CDS 132407 - 133813 1130 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 - Prom 134007 - 134066 2.9 + Prom 133903 - 133962 4.2 112 67 Tu 1 . + CDS 134075 - 135484 1029 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 135489 - 135541 -0.8 113 68 Tu 1 . + CDS 135941 - 137440 1047 ## COG0306 Phosphate/sulphate permeases + Term 137498 - 137532 4.3 - Term 137482 - 137523 5.0 114 69 Tu 1 . - CDS 137570 - 138277 561 ## ECUMN_3470 conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain - Prom 138317 - 138376 5.1 + Prom 138277 - 138336 7.9 115 70 Op 1 . + CDS 138451 - 139164 259 ## G2583_3711 hypothetical protein 116 70 Op 2 . + CDS 139207 - 139950 476 ## B21_02809 hypothetical protein + Prom 139980 - 140039 3.5 117 71 Op 1 . + CDS 140094 - 141425 637 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 118 71 Op 2 . + CDS 141429 - 142256 436 ## ECIAI39_3477 hypothetical protein 119 71 Op 3 . + CDS 142324 - 142884 363 ## COG3054 Predicted transcriptional regulator + Term 142953 - 142997 1.2 + Prom 142941 - 143000 6.4 120 72 Tu 1 . + CDS 143038 - 144084 601 ## COG0795 Predicted permeases + Term 144126 - 144155 -0.9 + Prom 144098 - 144157 3.1 121 73 Tu 1 . + CDS 144384 - 145160 482 ## COG0795 Predicted permeases 122 74 Op 1 . - CDS 145237 - 146409 848 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 123 74 Op 2 . - CDS 146396 - 146656 259 ## S3224 hypothetical protein 124 74 Op 3 2/0.455 - CDS 146688 - 147602 465 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 125 74 Op 4 . - CDS 147599 - 149299 617 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Prom 149541 - 149600 7.8 + Prom 149738 - 149797 4.3 126 75 Tu 1 . + CDS 149820 - 150944 552 ## ECED1_3624 putative DNA-binding transcriptional regulator + Term 150982 - 151013 1.1 127 76 Tu 1 . - CDS 151166 - 151921 244 ## COG2977 Phosphopantetheinyl transferase component of siderophore synthetase - Prom 151944 - 152003 4.1 - TRNA 152059 - 152134 84.1 # Phe GAA 0 0 + Prom 152609 - 152668 8.9 128 77 Tu 1 . + CDS 152829 - 153473 656 ## ETAE_0306 hypothetical protein + Term 153503 - 153550 13.5 - Term 153495 - 153534 7.6 129 78 Op 1 3/0.325 - CDS 153562 - 154137 514 ## COG1309 Transcriptional regulator 130 78 Op 2 7/0.091 - CDS 154197 - 155891 1174 ## COG4232 Thiol:disulfide interchange protein 131 78 Op 3 5/0.182 - CDS 155867 - 156217 309 ## COG1324 Uncharacterized protein involved in tolerance to divalent cations - Prom 156248 - 156307 3.1 - Term 156301 - 156338 8.0 132 79 Tu 1 . - CDS 156359 - 157660 1160 ## COG2704 Anaerobic C4-dicarboxylate transporter - Prom 157817 - 157876 4.8 - Term 157834 - 157874 3.5 133 80 Tu 1 . - CDS 157897 - 159333 1584 ## COG1027 Aspartate ammonia-lyase + Prom 159610 - 159669 4.0 134 81 Tu 1 . + CDS 159696 - 160205 399 ## COG3030 Protein affecting phage T7 exclusion by the F plasmid + Term 160235 - 160270 3.1 + Prom 160262 - 160321 4.2 135 82 Op 1 41/0.000 + CDS 160441 - 160734 394 ## COG0234 Co-chaperonin GroES (HSP10) 136 82 Op 2 . + CDS 160796 - 162439 2351 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 162511 - 162554 10.8 + Prom 162525 - 162584 8.1 137 83 Tu 1 . + CDS 162662 - 163021 294 ## ETAE_0327 hypothetical protein + Term 163042 - 163083 5.6 + Prom 163056 - 163115 4.9 138 84 Tu 1 . + CDS 163171 - 163791 307 ## COG1280 Putative threonine efflux protein + Term 163838 - 163872 2.0 139 85 Tu 1 . - CDS 163863 - 164723 555 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 164807 - 164866 5.1 + Prom 164700 - 164759 8.5 140 86 Op 1 1/0.597 + CDS 164950 - 166779 628 ## COG4289 Uncharacterized protein conserved in bacteria 141 86 Op 2 . + CDS 166826 - 168115 811 ## COG0477 Permeases of the major facilitator superfamily 142 86 Op 3 . + CDS 168175 - 169365 755 ## CKO_04418 hypothetical protein + Term 169377 - 169418 2.5 - Term 169216 - 169259 -0.9 143 87 Op 1 9/0.052 - CDS 169410 - 170885 1232 ## COG3412 Uncharacterized protein conserved in bacteria 144 87 Op 2 10/0.039 - CDS 170920 - 171549 582 ## COG2376 Dihydroxyacetone kinase 145 87 Op 3 . - CDS 171551 - 172621 903 ## COG2376 Dihydroxyacetone kinase 146 88 Tu 1 . - CDS 172724 - 173824 1012 ## COG0371 Glycerol dehydrogenase and related enzymes - Prom 173926 - 173985 4.5 + Prom 174254 - 174313 2.1 147 89 Op 1 5/0.182 + CDS 174342 - 175025 602 ## COG5463 Predicted integral membrane protein 148 89 Op 2 . + CDS 175028 - 176188 1211 ## COG0754 Glutathionylspermidine synthase + Term 176225 - 176262 7.1 - Term 176216 - 176246 3.0 149 90 Op 1 10/0.039 - CDS 176268 - 178487 1755 ## COG1982 Arginine/lysine/ornithine decarboxylases - Term 178515 - 178548 3.7 150 90 Op 2 . - CDS 178580 - 179905 1386 ## COG0531 Amino acid transporters - Prom 180139 - 180198 10.2 + Prom 180028 - 180087 5.8 151 91 Tu 1 . + CDS 180118 - 180342 116 ## + Term 180588 - 180626 0.3 + Prom 180555 - 180614 10.8 152 92 Op 1 . + CDS 180720 - 180953 122 ## 153 92 Op 2 . + CDS 181056 - 181553 213 ## + Term 181633 - 181683 1.4 + Prom 181615 - 181674 2.8 154 93 Tu 1 . + CDS 181787 - 182320 449 ## COG3091 Uncharacterized protein conserved in bacteria + Prom 182363 - 182422 3.6 155 94 Tu 1 . + CDS 182449 - 183159 429 ## COG2356 Endonuclease I + Term 183234 - 183262 2.1 + Prom 183162 - 183221 4.5 156 95 Op 1 2/0.455 + CDS 183283 - 184014 659 ## COG1385 Uncharacterized protein conserved in bacteria 157 95 Op 2 2/0.455 + CDS 184024 - 184977 327 ## PROTEIN SUPPORTED gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme + Prom 185018 - 185077 2.2 158 96 Op 1 8/0.052 + CDS 185159 - 185683 457 ## COG1678 Putative transcriptional regulator 159 96 Op 2 . + CDS 185683 - 186105 388 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) + Term 186121 - 186173 7.1 - Term 186029 - 186056 -0.1 160 97 Tu 1 . - CDS 186141 - 187166 382 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT + Prom 187087 - 187146 4.3 161 98 Op 1 5/0.182 + CDS 187189 - 187902 596 ## COG0325 Predicted enzyme with a TIM-barrel fold 162 98 Op 2 6/0.117 + CDS 187969 - 188523 566 ## COG0762 Predicted integral membrane protein 163 98 Op 3 2/0.455 + CDS 188520 - 188828 247 ## COG1872 Uncharacterized conserved protein + Term 188837 - 188875 8.7 164 99 Op 1 13/0.000 + CDS 188881 - 189474 854 ## PROTEIN SUPPORTED gi|15803493|ref|NP_289526.1| putative deoxyribonucleotide triphosphate pyrophosphatase 165 99 Op 2 . + CDS 189467 - 190597 878 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Term 190755 - 190791 -0.2 - Term 190515 - 190551 -0.6 166 100 Tu 1 . - CDS 190690 - 191724 683 ## COG1509 Lysine 2,3-aminomutase - Prom 191772 - 191831 3.9 + Prom 191687 - 191746 5.6 167 101 Op 1 . + CDS 191769 - 192335 676 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Term 192366 - 192392 1.0 168 101 Op 2 . + CDS 192424 - 192555 85 ## + Prom 192557 - 192616 4.0 169 101 Op 3 . + CDS 192652 - 192783 207 ## + Prom 192820 - 192879 4.2 170 102 Tu 1 . + CDS 192962 - 193279 341 ## COG2076 Membrane transporters of cations and cationic drugs + Term 193302 - 193333 4.1 171 103 Tu 1 . - CDS 193309 - 193857 471 ## COG3040 Bacterial lipocalin - Prom 193881 - 193940 3.5 - Term 193910 - 193946 6.6 172 104 Op 1 10/0.039 - CDS 193968 - 194324 350 ## COG3080 Fumarate reductase subunit D 173 104 Op 2 10/0.039 - CDS 194342 - 194740 516 ## COG3029 Fumarate reductase subunit C 174 104 Op 3 36/0.000 - CDS 194755 - 195489 832 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 175 104 Op 4 . - CDS 195482 - 197281 1594 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 197426 - 197485 6.1 + Prom 197611 - 197670 4.2 176 105 Tu 1 . + CDS 197695 - 198672 924 ## COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) + Term 198708 - 198744 -0.7 - Term 198782 - 198811 -0.3 177 106 Tu 1 . - CDS 199001 - 202318 2871 ## COG3264 Small-conductance mechanosensitive channel - Prom 202352 - 202411 2.5 - Term 202377 - 202421 8.2 178 107 Tu 1 . - CDS 202431 - 203414 951 ## COG0688 Phosphatidylserine decarboxylase - Prom 203454 - 203513 5.7 179 108 Tu 1 . - CDS 203622 - 204659 816 ## COG1162 Predicted GTPases - Prom 204849 - 204908 3.0 + Prom 204604 - 204663 2.1 180 109 Tu 1 . + CDS 204897 - 205442 535 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) + Term 205683 - 205720 -0.9 + TRNA 205734 - 205809 93.7 # Gly GCC 0 0 + TRNA 205865 - 205940 93.7 # Gly GCC 0 0 + TRNA 206000 - 206075 93.7 # Gly GCC 0 0 - Term 206210 - 206262 1.2 181 110 Tu 1 . - CDS 206385 - 207530 596 ## COG1600 Uncharacterized Fe-S protein - Prom 207555 - 207614 1.9 182 111 Op 1 6/0.117 + CDS 207529 - 209037 1101 ## PROTEIN SUPPORTED gi|153825000|ref|ZP_01977667.1| ribosomal protein S15 183 111 Op 2 13/0.000 + CDS 209129 - 209599 494 ## COG0802 Predicted ATPase or kinase 184 111 Op 3 10/0.039 + CDS 209606 - 211369 1073 ## COG0860 N-acetylmuramoyl-L-alanine amidase 185 111 Op 4 12/0.013 + CDS 211424 - 213340 1295 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 186 111 Op 5 15/0.000 + CDS 213364 - 214314 729 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase + Prom 214458 - 214517 5.4 187 111 Op 6 16/0.000 + CDS 214545 - 214850 374 ## COG1923 Uncharacterized host factor I protein + Term 214874 - 214924 11.1 188 112 Op 1 8/0.052 + CDS 214949 - 216229 697 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 189 112 Op 2 21/0.000 + CDS 216300 - 217559 1280 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 190 112 Op 3 11/0.026 + CDS 217563 - 218561 1144 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs + Term 218623 - 218661 6.8 + Prom 218611 - 218670 1.7 191 113 Op 1 6/0.117 + CDS 218690 - 218890 116 ## COG3242 Uncharacterized protein conserved in bacteria + Prom 218908 - 218967 6.1 192 113 Op 2 5/0.182 + CDS 218989 - 220287 1439 ## COG0104 Adenylosuccinate synthase + Term 220310 - 220350 9.0 + Prom 220518 - 220577 4.4 193 114 Op 1 2/0.455 + CDS 220731 - 221108 273 ## COG1959 Predicted transcriptional regulator 194 114 Op 2 7/0.091 + CDS 221150 - 223702 1214 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 + Prom 223709 - 223768 4.2 195 115 Tu 1 . + CDS 223822 - 224556 463 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 + Term 224588 - 224624 2.4 + Prom 224565 - 224624 6.2 196 116 Tu 1 . + CDS 224715 - 226349 954 ## COG1960 Acyl-CoA dehydrogenases + Term 226376 - 226414 2.1 197 117 Tu 1 . - CDS 226360 - 226635 306 ## ETAE_0362 hypothetical protein - Prom 226668 - 226727 6.7 - Term 226711 - 226763 8.5 198 118 Tu 1 . - CDS 226808 - 227116 218 ## ETAE_0363 hypothetical protein - Prom 227144 - 227203 2.1 + Prom 227108 - 227167 2.9 199 119 Tu 1 . + CDS 227296 - 228045 510 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 228119 - 228157 -1.0 - Term 228050 - 228090 3.1 200 120 Tu 1 . - CDS 228194 - 228469 329 ## ETAE_0365 hypothetical protein - Prom 228553 - 228612 3.8 + Prom 228559 - 228618 4.9 201 121 Op 1 10/0.039 + CDS 228846 - 229244 681 ## PROTEIN SUPPORTED gi|157368693|ref|YP_001476682.1| 30S ribosomal protein S6 202 121 Op 2 10/0.039 + CDS 229253 - 229570 148 ## COG2965 Primosomal replication protein N 203 121 Op 3 27/0.000 + CDS 229575 - 229802 385 ## PROTEIN SUPPORTED gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 204 121 Op 4 . + CDS 229842 - 230291 702 ## PROTEIN SUPPORTED gi|238787556|ref|ZP_04631354.1| 50S ribosomal protein L9 + Term 230323 - 230364 9.8 + Prom 230342 - 230401 2.0 205 122 Tu 1 . + CDS 230422 - 230784 254 ## COG3189 Uncharacterized conserved protein - Term 230673 - 230704 -1.0 206 123 Tu 1 . - CDS 230781 - 231419 522 ## COG3061 Cell envelope opacity-associated protein A - Prom 231561 - 231620 6.1 + Prom 231520 - 231579 5.8 207 124 Tu 1 . + CDS 231718 - 232338 835 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 + Term 232475 - 232509 3.1 - Term 232505 - 232541 2.2 208 125 Tu 1 . - CDS 232636 - 233307 741 ## COG2846 Regulator of cell morphogenesis and NO signaling - Prom 233339 - 233398 5.2 + Prom 233291 - 233350 5.5 209 126 Tu 1 . + CDS 233438 - 234241 552 ## COG3570 Streptomycin 6-kinase + Term 234410 - 234454 -0.5 - Term 234233 - 234267 5.2 210 127 Tu 1 . - CDS 234274 - 236223 2008 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 236380 - 236439 6.2 + Prom 236224 - 236283 2.2 211 128 Tu 1 . + CDS 236474 - 237214 629 ## COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase + Term 237239 - 237276 5.0 212 129 Tu 1 . - CDS 237220 - 237777 445 ## COG3054 Predicted transcriptional regulator - Prom 237960 - 238019 3.7 + Prom 237824 - 237883 5.4 213 130 Tu 1 . + CDS 238109 - 238315 286 ## ETAE_0374 hypothetical protein + Term 238363 - 238399 2.1 - Term 238354 - 238381 1.5 214 131 Tu 1 . - CDS 238435 - 239676 1307 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 239835 - 239894 2.8 - Term 239890 - 239921 2.5 215 132 Tu 1 . - CDS 240035 - 240676 568 ## COG0225 Peptide methionine sulfoxide reductase - Prom 240795 - 240854 4.8 + Prom 240742 - 240801 2.8 216 133 Op 1 16/0.000 + CDS 240927 - 242663 1208 ## COG0729 Outer membrane protein 217 133 Op 2 6/0.117 + CDS 242660 - 246589 3415 ## COG2911 Uncharacterized protein conserved in bacteria 218 133 Op 3 . + CDS 246589 - 246942 353 ## COG2105 Uncharacterized conserved protein + Term 246977 - 247007 3.0 - Term 246954 - 247004 11.1 219 134 Tu 1 . - CDS 247018 - 247548 600 ## COG0221 Inorganic pyrophosphatase - Prom 247582 - 247641 4.9 - Term 247564 - 247606 8.1 220 135 Tu 1 . - CDS 247696 - 248700 948 ## COG0158 Fructose-1,6-bisphosphatase - Prom 248759 - 248818 4.3 + Prom 248718 - 248777 4.1 221 136 Tu 1 . + CDS 248869 - 250248 1303 ## COG0773 UDP-N-acetylmuramate-alanine ligase + Term 250272 - 250319 7.1 - Term 250317 - 250346 2.1 222 137 Tu 1 . - CDS 250443 - 250706 379 ## Spro_0467 hypothetical protein + Prom 250370 - 250429 2.4 223 138 Tu 1 . + CDS 250591 - 250851 73 ## 224 139 Tu 1 . - CDS 250842 - 251105 337 ## YE0412 hypothetical protein - Prom 251160 - 251219 4.2 - Term 251491 - 251523 1.4 225 140 Tu 1 . - CDS 251535 - 252005 354 ## COG1438 Arginine repressor - Prom 252031 - 252090 7.4 + Prom 252278 - 252337 4.6 226 141 Tu 1 . + CDS 252473 - 253411 1137 ## COG0039 Malate/lactate dehydrogenases + Term 253426 - 253459 1.2 - Term 253412 - 253445 1.2 227 142 Tu 1 . - CDS 253475 - 253774 176 ## COG3423 Predicted transcriptional regulator - Prom 253878 - 253937 7.4 - Term 253931 - 253962 1.8 228 143 Tu 1 . - CDS 253984 - 254955 893 ## COG0142 Geranylgeranyl pyrophosphate synthase - Prom 255030 - 255089 3.7 + Prom 255091 - 255150 4.8 229 144 Op 1 32/0.000 + CDS 255215 - 255526 507 ## PROTEIN SUPPORTED gi|157368720|ref|YP_001476709.1| 50S ribosomal protein L21 230 144 Op 2 6/0.117 + CDS 255545 - 255802 427 ## PROTEIN SUPPORTED gi|152972109|ref|YP_001337255.1| 50S ribosomal protein L27 + Term 255829 - 255864 6.1 231 145 Op 1 6/0.117 + CDS 255892 - 256833 588 ## PROTEIN SUPPORTED gi|241758620|ref|ZP_04756734.1| 50S ribosomal protein L27 232 145 Op 2 . + CDS 256900 - 258078 814 ## PROTEIN SUPPORTED gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 + Term 258134 - 258162 3.0 - Term 258115 - 258156 6.2 233 146 Op 1 40/0.000 - CDS 258183 - 259226 729 ## COG0642 Signal transduction histidine kinase 234 146 Op 2 1/0.597 - CDS 259253 - 259915 693 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 235 146 Op 3 . - CDS 259961 - 261430 823 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) - Prom 261454 - 261513 3.1 + Prom 261492 - 261551 7.7 236 147 Tu 1 . + CDS 261673 - 262149 548 ## COG0782 Transcription elongation factor + Term 262212 - 262240 2.1 - Term 262191 - 262235 7.8 237 148 Tu 1 . - CDS 262289 - 262582 428 ## PROTEIN SUPPORTED gi|22124594|ref|NP_668017.1| hypothetical protein y0680 - Prom 262612 - 262671 2.7 + Prom 262569 - 262628 3.1 238 149 Op 1 13/0.000 + CDS 262723 - 263349 571 ## COG0293 23S rRNA methylase 239 149 Op 2 7/0.091 + CDS 263397 - 265352 1694 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 265385 - 265424 3.4 + Prom 265374 - 265433 7.7 240 150 Op 1 9/0.052 + CDS 265463 - 266296 719 ## COG0294 Dihydropteroate synthase and related enzymes 241 150 Op 2 . + CDS 266304 - 267641 1337 ## COG1109 Phosphomannomutase + Term 267677 - 267724 6.1 242 151 Tu 1 . - CDS 267592 - 267918 65 ## + Prom 267721 - 267780 3.3 243 152 Tu 1 . + CDS 267863 - 268198 296 ## COG1314 Preprotein translocase subunit SecG + Term 268289 - 268328 2.0 + TRNA 268326 - 268412 70.3 # Leu GAG 0 0 + TRNA 268469 - 268545 86.1 # Met CAT 0 0 + Prom 268693 - 268752 3.4 244 153 Op 1 32/0.000 + CDS 268791 - 269213 363 ## COG0779 Uncharacterized protein conserved in bacteria 245 153 Op 2 20/0.000 + CDS 269235 - 270722 1663 ## COG0195 Transcription elongation factor 246 153 Op 3 32/0.000 + CDS 270747 - 273449 3196 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) + Term 273478 - 273512 5.0 247 153 Op 4 26/0.000 + CDS 273522 - 273932 553 ## COG0858 Ribosome-binding factor A 248 153 Op 5 14/0.000 + CDS 273932 - 274882 899 ## COG0130 Pseudouridine synthase + Term 274947 - 274987 1.2 + Prom 274884 - 274943 1.9 249 153 Op 6 26/0.000 + CDS 275011 - 275280 431 ## PROTEIN SUPPORTED gi|238918427|ref|YP_002931941.1| ribosomal protein S15, putative + Term 275304 - 275333 1.1 + Prom 275337 - 275396 5.9 250 153 Op 7 6/0.117 + CDS 275616 - 277730 179 ## PROTEIN SUPPORTED gi|116618391|ref|YP_818762.1| SSU ribosomal protein S1P + Term 277748 - 277785 7.6 251 154 Tu 1 2/0.455 + CDS 277830 - 278738 703 ## COG4785 Lipoprotein NlpI, contains TPR repeats + Term 278776 - 278806 2.0 + Prom 278764 - 278823 4.1 252 155 Op 1 . + CDS 278910 - 280820 2050 ## COG0513 Superfamily II DNA and RNA helicases 253 155 Op 2 . + CDS 280774 - 280962 80 ## 254 155 Op 3 10/0.039 + CDS 281035 - 282246 1281 ## COG2391 Predicted transporter component 255 155 Op 4 . + CDS 282243 - 282482 304 ## COG0425 Predicted redox protein, regulator of disulfide bond formation + Term 282501 - 282560 4.1 - Term 282403 - 282431 -0.9 256 156 Tu 1 . - CDS 282516 - 283538 869 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - Prom 283693 - 283752 6.3 257 157 Op 1 3/0.325 + CDS 284169 - 285494 1032 ## COG0814 Amino acid permeases 258 157 Op 2 . + CDS 285544 - 286887 910 ## COG3681 Uncharacterized conserved protein 259 158 Op 1 13/0.000 - CDS 287090 - 287968 641 ## COG0826 Collagenase and related proteases 260 158 Op 2 . - CDS 287980 - 288975 935 ## COG0826 Collagenase and related proteases - Prom 289047 - 289106 3.0 + Prom 289097 - 289156 5.2 261 159 Op 1 6/0.117 + CDS 289278 - 289799 487 ## COG3154 Putative lipid carrier protein 262 159 Op 2 . + CDS 289793 - 290311 548 ## COG3153 Predicted acetyltransferase + Term 290328 - 290368 4.6 - Term 290240 - 290285 1.8 263 160 Op 1 . - CDS 290392 - 291699 945 ## COG1457 Purine-cytosine permease and related proteins - Prom 291720 - 291779 1.6 264 160 Op 2 . - CDS 291781 - 292419 337 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 265 160 Op 3 . - CDS 292496 - 292906 348 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 292928 - 292987 5.1 266 161 Tu 1 . - CDS 293237 - 293611 256 ## COG2827 Predicted endonuclease containing a URI domain - Prom 293635 - 293694 3.9 267 162 Tu 1 . + CDS 293680 - 294114 265 ## COG3787 Uncharacterized protein conserved in bacteria + Prom 294153 - 294212 2.6 268 163 Tu 1 . + CDS 294237 - 294866 536 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 269 164 Op 1 3/0.325 - CDS 294851 - 295639 516 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 270 164 Op 2 3/0.325 - CDS 295642 - 296085 417 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 271 164 Op 3 7/0.091 - CDS 296101 - 296664 457 ## COG3709 Uncharacterized component of phosphonate metabolism 272 164 Op 4 6/0.117 - CDS 296664 - 297800 835 ## COG3454 Metal-dependent hydrolase involved in phosphonate metabolism 273 164 Op 5 7/0.091 - CDS 297813 - 298502 243 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 274 164 Op 6 7/0.091 - CDS 298512 - 299318 353 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 275 164 Op 7 8/0.052 - CDS 299315 - 300163 833 ## COG3627 Uncharacterized enzyme of phosphonate metabolism 276 164 Op 8 8/0.052 - CDS 300156 - 301241 1025 ## COG3626 Uncharacterized enzyme of phosphonate metabolism 277 164 Op 9 9/0.052 - CDS 301225 - 301824 401 ## COG3625 Uncharacterized enzyme of phosphonate metabolism 278 164 Op 10 5/0.182 - CDS 301824 - 302297 333 ## COG3624 Uncharacterized enzyme of phosphonate metabolism 279 164 Op 11 3/0.325 - CDS 302298 - 303023 671 ## COG2188 Transcriptional regulators 280 164 Op 12 8/0.052 - CDS 303042 - 303836 873 ## COG3639 ABC-type phosphate/phosphonate transport system, permease component 281 164 Op 13 15/0.000 - CDS 303920 - 304936 765 ## COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component 282 164 Op 14 . - CDS 304972 - 305775 242 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 305848 - 305907 5.2 283 165 Tu 1 . - CDS 306037 - 306516 455 ## COG0602 Organic radical activating enzymes - Term 306630 - 306680 12.3 284 166 Tu 1 . - CDS 306690 - 308828 1929 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 308986 - 309045 3.8 285 167 Tu 1 . - CDS 309221 - 309913 603 ## COG1741 Pirin-related protein + Prom 309945 - 310004 3.8 286 168 Op 1 2/0.455 + CDS 310024 - 310917 997 ## COG0583 Transcriptional regulator 287 168 Op 2 . + CDS 310947 - 311798 320 ## PROTEIN SUPPORTED gi|90020671|ref|YP_526498.1| ribosomal protein S6 + Term 311809 - 311851 3.8 288 169 Tu 1 . - CDS 311847 - 313088 1232 ## COG3633 Na+/serine symporter - Prom 313194 - 313253 9.0 - Term 313400 - 313430 3.3 289 170 Tu 1 . - CDS 313438 - 314409 1052 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance - Term 314764 - 314811 16.3 290 171 Tu 1 . - CDS 314819 - 315541 596 ## COG0518 GMP synthase - Glutamine amidotransferase domain - Prom 315629 - 315688 3.3 + Prom 315459 - 315518 3.0 291 172 Tu 1 . + CDS 315723 - 316646 910 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 316655 - 316691 6.5 - Term 316434 - 316466 2.1 292 173 Op 1 1/0.597 - CDS 316688 - 317725 829 ## COG0673 Predicted dehydrogenases and related proteins 293 173 Op 2 . - CDS 317818 - 318321 526 ## COG1451 Predicted metal-dependent hydrolase - Prom 318426 - 318485 3.2 + Prom 318305 - 318364 2.4 294 174 Tu 1 . + CDS 318480 - 319646 453 ## PROTEIN SUPPORTED gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative + Term 319682 - 319718 5.0 + Prom 319719 - 319778 7.7 295 175 Tu 1 . + CDS 319800 - 320963 1022 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase + Term 321089 - 321144 6.5 - Term 321385 - 321440 4.6 296 176 Op 1 40/0.000 - CDS 321555 - 322913 1004 ## COG0642 Signal transduction histidine kinase 297 176 Op 2 . - CDS 322910 - 323572 774 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 323670 - 323729 3.2 + Prom 323642 - 323701 2.7 298 177 Tu 1 . + CDS 323800 - 324207 522 ## COG3111 Uncharacterized conserved protein + Term 324223 - 324259 7.1 299 178 Tu 1 . - CDS 324262 - 326283 1686 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family - Prom 326369 - 326428 2.4 + Prom 326341 - 326400 2.7 300 179 Tu 1 . + CDS 326482 - 327012 401 ## COG1335 Amidases related to nicotinamidase + Term 327131 - 327172 0.1 + Prom 327158 - 327217 5.9 301 180 Op 1 . + CDS 327344 - 328660 793 ## COG0582 Integrase 302 180 Op 2 . + CDS 328665 - 329279 461 ## YPK_0608 filamentation induced by cAMP protein Fic + Term 329280 - 329317 3.4 303 181 Tu 1 . - CDS 329276 - 329422 153 ## - Prom 329446 - 329505 4.8 304 182 Tu 1 . + CDS 329883 - 330359 268 ## Dd1591_0921 hypothetical protein + Term 330487 - 330519 2.4 Predicted protein(s) >gi|316918327|gb|ADCU01000016.1| GENE 1 222 - 599 167 125 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C4570 NR:ns ## KEGG: UTI89_C4570 # Name: yjaA # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 121 13 138 139 99 43.0 3e-20 MSLIYIQIRTNKITVRNIETQQEITGSALFTTERLLVGQFFPAEKLLRELAQQVMPRFNT PFNRPGLLVHALDMFEGGLSQIEDRVLKEITARTAFRNSGLVVYAGERTLSDMEAKAIFE QYRNN >gi|316918327|gb|ADCU01000016.1| GENE 2 641 - 2299 1528 552 aa, chain - ## HITS:1 COG:YPO0251 KEGG:ns NR:ns ## COG: YPO0251 COG4147 # Protein_GI_number: 16120588 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Yersinia pestis # 6 552 9 551 551 822 84.0 0 MKSRLLMLFVLAAMSFSSYAADAITGAVERQPLNIQAIVMFVIFVGATLYITYWASKRTR SRKDYYTAGGNITGLQNGLAMAGDFMSAASFLGISALVYTSGYDGLIYSLGFLVGWPIML FLVAERLRNLGRYTFADVASYRLQQRPIRTLSACGSLVVVALYLIAQMVGAGKLIELLFG LNYHIAVVLVGVLMVMYVLFGGMLATTWVQIIKAVLLLAGASFMAIMVMKSVGFSFNTLF NQAMEVNPKGAAIMRPGGLVSDPISALSLGLALMFGTAGLPHILMRFFTVSDAKEARKSV FYATGFMGYFYFLTFIIGFGAIVLVGSNPAFKDAAGALIGGTNMAAVHLADAVGGSFFLG FISAVAFATILAVVAGLTLAGASAVSHDLYANVFKQGKATERNELKVSKITVLVLGVVAI GLGILFENQNIAFMVGLAFSIAASCNFPILILSMYWSKLTTRGAMVGGWLGLLTAVVLMI LGPTIWVKVLGHATPIYPYEYPALFSMAAAFIGTWLFSITDNSEAAVQERGRFYSQFVRS QTGVGISQGTSH >gi|316918327|gb|ADCU01000016.1| GENE 3 2296 - 2607 269 103 aa, chain - ## HITS:1 COG:YPO0252 KEGG:ns NR:ns ## COG: YPO0252 COG3162 # Protein_GI_number: 16120589 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 103 1 103 103 150 70.0 6e-37 MNDAIYQRIENNPRFKELVQKRERFAWTLSWIMMILYFGFILLIAFAPGWLGTPISEGSS VTRGIPIGVGLIVVSFVLTGIYVIRANGEFDRLNHQVLQEAGQ >gi|316918327|gb|ADCU01000016.1| GENE 4 2729 - 4687 1837 652 aa, chain - ## HITS:1 COG:YPO0253 KEGG:ns NR:ns ## COG: YPO0253 COG0365 # Protein_GI_number: 16120590 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Yersinia pestis # 1 652 1 652 652 1207 87.0 0 MSQIHKHSIPANIAEHTLINPQMYRELYQRSVKDPDGFWAEYGKIIDWMKPYSKVKNTSF DPGHVSIRWFEDGTLNLAANCLDRHLEERGNQTAIIWEGDNPQESKTVSYRELHHDVCRF GNVLKKLGVKKGDVVAIYMPMVVEAAVAMLACARIGAIHSVIFGGFSPEAVAGRIIDSNS KIVITADEGLRAGRPIPLKKNVDDALKNPNVKSVEHVVVFKRTGKQGEWNSDRDLWWHDL IEQVDANCPPEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDI YWCTADVGWVTGHSYLLYGPLANGAITLMFEGVPNYPGVNRLSQVVDKHQVNILYTAPTA IRALMAEGDKATEGTQRTSLRIMGSVGEPINPEAWEWYFNKIGNSKCPIMDTWWQTETGG FMITPLPGAIELKAGSATLPFFGVQPALVDNGGIPQEGACEGNLVMVDSWPGQARTLFGD HDRFEQTYFSTFKGMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVSHP KIAEAAVVGVPHNIKGQAIYAYITLNHGEEPTPELYTEVRNWVRKEIGPIATPDILHWTD ALPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQSMEVSS >gi|316918327|gb|ADCU01000016.1| GENE 5 5427 - 6731 1282 434 aa, chain + ## HITS:1 COG:YPO0254 KEGG:ns NR:ns ## COG: YPO0254 COG1301 # Protein_GI_number: 16120591 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Yersinia pestis # 1 428 1 428 438 645 90.0 0 MKKFKFTLAWQIVAALILGIIVGAVLHNQEESRVWLVSNILSPAGDIFIRLIKMIVIPIV ISTLIVGIAGVGDAKKLGRIGLKTIIYFEVITTVAIIVGITLANVFQPGHGIDMSTLATV DISQYEKTTEQVQSGSHSLVSTILALIPSNLFASMAKGDILPIIFFSVLFGLGLSSLPKE TKEPLLKVFKAVSESMFKVTHMIMRYAPIGVFGLISVTVANFGFASLVPLAKLVVLVYFA IIFFALVVLGSVAKLCKLNIWTLIKILKDELILAYSTASSETVLPRIIEKMEAYGAPKSI TSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIGQEIVLVLTLMVTSKGIAGVPGV SFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVIAKWEHQFDRKKA KAYEENMLVKAEQF >gi|316918327|gb|ADCU01000016.1| GENE 6 6814 - 8769 1416 651 aa, chain - ## HITS:1 COG:ycgU KEGG:ns NR:ns ## COG: ycgU COG3284 # Protein_GI_number: 16129164 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; K Transcription # Function: Transcriptional activator of acetoin/glycerol metabolism # Organism: Escherichia coli K12 # 29 649 19 639 642 635 51.0 0 MQPDTSSDRWIYFFSHGNLPETMRPAQPIYQSWVRCQKLMQPMPWKMPHRAAGATLRSIC QRKNDLLVLGQAALEDAYEYMESRPCVLQILDESGCLLWQCGHVKTRTALAALGFDIGSY WAEGHIGTNAPALAMRDGNPVQVHGDEHFKQALRAWHCSATPVYDNSGRQRAVIVIACLI ADYAVSDLPLTLAIAREIGNSLHTDALLSETNRHLNELYALLDGVEDGVLAWDHNGCLQY LNHRAAGMLLLDEQNSLGRPLPSLLTLPSLLQHAIQQRLPLNHVEMTFESRKQFIATLLT LKPVPDGEHCGFIALLHPLDQLRRLVNHQLGKVSQTFEQMPAGSLDMRRLLRYGRQAARG QHPILLQGEEGVGKELLAQAIHNASERANSSYIAINCQTLVEGQFAKELLGSDATETDAG LPSKFELANGGTLYLEQIEYLPPEMQSVLLQIIKTGVIMRQNSSRIIPVDVRIIAATGAN LPLLVKQGRFRRQLFYTLQSFELQIPPLRQRQSDIPLLVTHHLNILGQHFHCRYQIDEAV LLQLRDYPWPGNDQELKGVVERAAMICQHNHIRMADLPEHLMTEKLTVEPESPLLTPVMS LEDAERQAIIRAAHAAQGKPHDMARMLGIGRTTLWRKLKQYQLEMEQFKSD >gi|316918327|gb|ADCU01000016.1| GENE 7 8930 - 10411 1439 493 aa, chain - ## HITS:1 COG:STM3186 KEGG:ns NR:ns ## COG: STM3186 COG1538 # Protein_GI_number: 16766486 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 1 493 3 491 491 584 71.0 1e-166 MKKLLPLLIGLSLGGFTTLSHAENLMQVYQQAKESNPDLRKAAADRDVAFEKINESRSPL LPQLGLGADYTYTNGMRDNDGLNSNNYGASLQLTQTIFDMSKWRQLSLTEKQAGIQDVSY QSSEQTLMLNSATAYFNVLRAIDALSYIEANKEAIYRQLDQTTQRFNVGLVAITDVQNAR AQYDLVLANEVTARNNLDNSLEALRQITGQYYGQLDSLNVERFSTTKPENVNSLLQEAEK RNLSLLSARLSQDLAREQIKYAQTGYMPTLDLTASSGVSNTDYNSLSNSQKAQNSNGASS YQGQNTIGLQFNLPLYSGGATNSQVQQAQYNFVGASESLESAHRSVIQNVRSSFNNISAS ISGVEAYRQAVVSAQSSLEATEAGYQVGTRTIVDVLNATTTLYSAKESLSNARYDYLISQ LNIKYALGTLNQNDLMALNGGLTKPVSTTPDIIAPQGKTQADQVNSDYSAAPVAQATPVS STSSSKGKNPFRN >gi|316918327|gb|ADCU01000016.1| GENE 8 10630 - 11289 668 219 aa, chain + ## HITS:1 COG:ECs3922 KEGG:ns NR:ns ## COG: ECs3922 COG0494 # Protein_GI_number: 15833176 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 8 208 8 208 209 323 81.0 2e-88 MSEKNPSPVTFSKNDVEIIARESLYRGFFSLERYRFRHRLFDGSMSGEVVREVFERGHAA VLLPYDPVRDEVVLVEQIRIPALDSSQTPWLLEMVAGMIEPGETVEDVARREAQEEAGIH VQRCKPVLSYLASPGGTSERLSIMVGEIDAEKASGIHGLPEEHEDIRVHVVSRDQAYRWV EEGVIDNAASVIALQWLALHHESLRREWMNPQLGCSSAN >gi|316918327|gb|ADCU01000016.1| GENE 9 11307 - 11732 285 141 aa, chain + ## HITS:1 COG:YPO0665 KEGG:ns NR:ns ## COG: YPO0665 COG3151 # Protein_GI_number: 16120990 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 140 1 140 141 224 77.0 3e-59 MMKRYSPDFPLMMRLCETNYAQLRRLLPRKDEVGESQGYQVNGASYQIKITESTRYTSMA EITQTQPEPGHWGLPSMSVRLYHDAMVAEVCASQQISRFKARYDYPNKKLHQRDEKHQIN QFLADWLHYCLTHGVMAIPVY >gi|316918327|gb|ADCU01000016.1| GENE 10 11821 - 12648 574 275 aa, chain + ## HITS:1 COG:YPO0666 KEGG:ns NR:ns ## COG: YPO0666 COG1409 # Protein_GI_number: 16120991 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Yersinia pestis # 1 275 1 275 275 429 74.0 1e-120 MESLFQLTVARGAPVRILQITDTHLFAGEHETLLGVNTHRSYHAVLEAIHAEARPYDIVV ATGDLAQDHSVAAYQHFANGIATLNKTCLWLPGNHDFQPAMVDTLANAGVNPAKHMLLGD YWQIILLDSQVFGVPHGELSDYQLEWLERTLSLYPQRHALILLHHHPLPSGCTWLDQHSL RNAHMLGEVLQHYPLAKTLLCGHIHQDLDLQWEGRRLLATPSTCIQFKPLCTNFTIDTLS PGWRYLDLHPDGTLTTELHRLDGTEFRPDLDSDGY >gi|316918327|gb|ADCU01000016.1| GENE 11 12651 - 13235 410 194 aa, chain + ## HITS:1 COG:ECs3919 KEGG:ns NR:ns ## COG: ECs3919 COG3150 # Protein_GI_number: 15833173 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 190 1 190 193 308 77.0 5e-84 MPTLLYLHGFNSSPRSAKATALKQWLAVNHPEITMLVPQLPPYPSDAAEMLEEIVMSRSG RPLGVVGSSLGGYYATWLSQCFTLPAVVVNPAVKPYELLIDFLGQNENPYTGQQYVLESR HVYDLKVMQVEPLESPDLLWLLQQTGDEVLDYRQAVAYYALCRQTIEPEGSHSFVGFERF FPQIVDFLELATDY >gi|316918327|gb|ADCU01000016.1| GENE 12 13344 - 15239 1878 631 aa, chain + ## HITS:1 COG:YPO0668 KEGG:ns NR:ns ## COG: YPO0668 COG0187 # Protein_GI_number: 16120993 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Yersinia pestis # 1 631 1 631 631 1210 91.0 0 MTQSSYNADSIEVLSGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHASRVEVIL YPDQSLEVIDDGRGMPVDIHPEEGVPAIELILCRLHAGGKFSNKNYQFSGGLHGVGISVV NALSKRVEVTVRRDGQVYQMAFENGDKVEDLHVTGTCGKRNTGTSVHFWPDEQFFDSPKF SVSRLNHLLKAKAVLCPGVEIVFKDKLNNTEQRWCYQDGLTDYLMEAVNGLITLPEQAFT GSFSGDTEAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEFRN LLPRGVKLSADDIWERCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSAIVKDAFSVWLN QNVQVAEQLAELAISSAQRRMRAAKKVVRKKLTSGPALPGKLADCTAQDLSRTELFLVEG DSAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSDDLSQ LRYGKICILADADSDGLHIATLLCALFVRHFQSLVRGGHVYVAMPPLFRIDLGKEVYYAL DEEEKAGVLEQLKRKKGKPNVQRFKGLGEMNPLQLRETTLDPNTRRLVQLTIDDTDVDQT MAVMDMLLAKKRSEDRRNWLQEKGDLADLDV >gi|316918327|gb|ADCU01000016.1| GENE 13 15405 - 16115 578 236 aa, chain + ## HITS:1 COG:PA3192 KEGG:ns NR:ns ## COG: PA3192 COG0745 # Protein_GI_number: 15598388 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Pseudomonas aeruginosa # 6 232 7 236 242 216 53.0 4e-56 MMLPYSLLLIDDDAEIRSLLTEYFTRAGFSVIALPDGEKLMQTLQQQSVDLIILDVMMPG MDGFTLCRMVRNTSSVPIIMLTAASDETDKVIGLELGADDYLAKPFSARELLARVKALLR RNQIAQSPTAEARYLCFNGWKLDLLRRELIDSQGAAEILSGIEFALLSLFLRFPNKILDR DQISEITRRRENNPLERGIDVQISRLRQRLHDVDRRLLRTIRNQGYMLCCDVSREY >gi|316918327|gb|ADCU01000016.1| GENE 14 16339 - 17574 916 411 aa, chain + ## HITS:1 COG:PA3191 KEGG:ns NR:ns ## COG: PA3191 COG0642 # Protein_GI_number: 15598387 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pseudomonas aeruginosa # 3 408 60 469 473 314 44.0 2e-85 MSSLPRNYRHLVLQQQLELGGSQFFISINSHPLKQQPLADSSNVQRVLALAQSEVLNQQG DRLNSVISLTAANQLRVFNAGVLMVDLPPGWARFGLVTSRGDEPVLALQLALNKDEWLFI AAPLPPPYDQLDLPLFGSRQLGFTLCSMLLVALFGGWLIRRELRPLARLAQGAHQLNTQL DSPPLPEEGSAELVSATRAFNQMQDRLRAYLHNREILFTAISHDLKTPLTRLRLRVEMLD DPPLEKKLEQDLHDLEMMVKGALQSMKDTDIHENMERIDLRHLLAQLMDAHTNISLRGTP HYLFGRPLALKRCINNLVDNGLKYGDRLEISVENYPEHMTLSFRDYGPGIPQAQLENVFK PYYRLHSDTQGSGLGLAIARGIARAHGGDITLYNHPCGGLIAVLRLRRYLQ >gi|316918327|gb|ADCU01000016.1| GENE 15 17600 - 18850 1170 416 aa, chain + ## HITS:1 COG:PA3190 KEGG:ns NR:ns ## COG: PA3190 COG1653 # Protein_GI_number: 15598386 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Pseudomonas aeruginosa # 19 399 25 404 420 348 48.0 1e-95 MKKVLLTTALLTMAMNCSAATVEVLHYWTSESESAALNLLKQELAAKGDTWQDFTVKGGG GESAYSVLQTRMIAGNPPTAALMEGKFIQEWGALGFLSSPYTKEQTEAWDRVLPPLIRQI TQYHGEYVAVPVNNHRINWLWINPKPFNALHLAIPTTWDEFFAAADKLKAAGYIPLAHGG QAWQDATLFENILLGLEGGQFYRDVFEKLDSKAITSDRMIRVLQRFRQLHDDIDPKSAGR PWHESAELLYSGKAAMMIMGDWAKGELMQMGAVPNKDFLCVATPGTEGYFIYGTDSFAIL QQNGNATAVEAQRRLADVLMDPDFQRRFNQLKGSIPVRNDIDMSTFDVCAQQAAKVFKDA EKTNRLLPSMAHSMAVDVQAKEVFFRVLNDFFTHPNQTPEQAVMQLNTALMAVKGY >gi|316918327|gb|ADCU01000016.1| GENE 16 18853 - 19389 -9 178 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0515 NR:ns ## KEGG: EC55989_0515 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 33 139 34 142 163 82 41.0 6e-15 MDSQMRKTFSLLPILLIIIVFISLLVLFAGRFRDTGEVSKTYATYSDIPNDDGIHTWLPD FFPTQAKDIGASTIVEHDYLQVNFRLEKNAASEFDKTFTVQMSDAGIKFLQNEWITHGWC KLAKVPEEGDDEHFYLIGKATGKAGYIYVLTLISPSRYGDSDGETQENMARYCVLKNR >gi|316918327|gb|ADCU01000016.1| GENE 17 19438 - 19875 501 145 aa, chain - ## HITS:1 COG:ECs4014 KEGG:ns NR:ns ## COG: ECs4014 COG2893 # Protein_GI_number: 15833268 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 145 1 144 144 122 44.0 3e-28 MISLIITGHGRFASGLFSAVEQVIGPQEQCVAVDFPPEMSTQQLDEKLTQALASLPQQDG VLFFTDLLGGSPFRSSVILSQALANSDVVAGTNMQMLAEMLMEREEIASIQEFVTQALAC GHQGMLSFREKAAENASAVEIDEGI >gi|316918327|gb|ADCU01000016.1| GENE 18 19921 - 20781 665 286 aa, chain - ## HITS:1 COG:ECs4019 KEGG:ns NR:ns ## COG: ECs4019 COG3716 # Protein_GI_number: 15833273 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 28 286 5 263 263 357 68.0 1e-98 MASEIVNTENTSVPATTAGQDNPPKTVLTRGDITRLGFRSALLQSGFNYERMQATGFASA QSPLLKKIYANDKDALSASMRDNLEFINTNTNAAGFLMGLLISLEERHESRDLIKGLKVA LFGPLAGIGDAIFWFTLLPIVAGVCASFASQGSILGPLIFFVVYAALFLLRVVWTHLGYS LGVRAIDKLRSSSGAISRAATILGVTVIGGLIASYVHLTVTAKIAVTAGHEVSIQEAFFD KVFPNLLPLGYTLLMYYLLRAKKVSPVTLILVTFVLSIALSWLGVL >gi|316918327|gb|ADCU01000016.1| GENE 19 20771 - 21556 899 261 aa, chain - ## HITS:1 COG:agaC KEGG:ns NR:ns ## COG: agaC COG3715 # Protein_GI_number: 16131031 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli K12 # 1 249 1 249 267 336 71.0 3e-92 MHEITLMQGMGLAIMALIVGIDFWLEALYIFRPLIVCTLTGAILGDIQTGLITGALTELA FTGLTPIGGTQPPNPVLAGIMTTVIAHSTGVDAKTAIGLGLPFSFLMQYIILFYYSAFSF FMQKADRYAEEGDTRSLGRLNLLLTSIVAISYAAVTFFCAYVSQGAMQTLVQSMPAWLTH GFEVAGGVLPAVGFGLLLKVMMKTPFIPFFIVGFLFVTFIPVQNLLPVAVLGAAFAVYEY FNEQKKAAATVVVAEDMEDGI >gi|316918327|gb|ADCU01000016.1| GENE 20 21612 - 22085 463 157 aa, chain - ## HITS:1 COG:ECs4018 KEGG:ns NR:ns ## COG: ECs4018 COG3444 # Protein_GI_number: 15833272 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 1 156 1 156 158 201 64.0 4e-52 MATPNILLLRIDNRLVHGQVGVAWSSSLGANLLLVADDGVAQDPLQQQIMSMTAESMGIG IRFFSLQKTIDIIGKASAAQKIFIVCRTPQEARFLIEGGVPIKSVNVGNMHFVEGKRSIT KKVYVDDQDLANLRAIQAKGVDVFIQDTPSDSKHSID >gi|316918327|gb|ADCU01000016.1| GENE 21 22277 - 23005 426 242 aa, chain - ## HITS:1 COG:SPy0715 KEGG:ns NR:ns ## COG: SPy0715 COG2188 # Protein_GI_number: 15674773 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 5 238 1 233 240 98 29.0 1e-20 MHNELEQAAPLYLHIAKDLRERIEAGEFPLDTLLPPEPVLCQQYQCGRVTLRTAVEMLAQ RGFLTKKQGRGTLVTTPAWLADNTLPVGFSEKMTQAGLAHHTQVVRFEQCPVTPEQAQKL GLNASQRVIILERLRFVEQHPALYEITVLPAERFATLNRQHVEQHGLYHTLAHDFNLLSM QAQDDYRPCIAPAPMAALLQLEHQQPCIEIVRLATSHDQPFEFTVSYTNTEHYPLRFRYL RG >gi|316918327|gb|ADCU01000016.1| GENE 22 23005 - 24183 866 392 aa, chain - ## HITS:1 COG:SP0065 KEGG:ns NR:ns ## COG: SP0065 COG2222 # Protein_GI_number: 15900010 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Streptococcus pneumoniae TIGR4 # 9 388 4 382 388 160 28.0 4e-39 MQNSSNTLFSEAEWQSAGGLLTLQSICNQPRLWREGFALVQQHRAEIGRFWQQLADEPRN IILCGAGSSLSAARVAAQWIRQQTGKSIQVLASTDIVVKPELYLENKPTLLVSVTSSGST PESTAVFELAERLIDDCYHLIVANDPQGELPKRSQHHAKTLYIPAPIGTKNGSFAAAAEF TLPIWYLLLIFLPQQWDIAQRALDVYQHGADYFLSQQADKIAAIAKRDAPVVISLGSSSL QFIAADASLKLLEMCNGRQATDDFSTLAFRHGPKLIVNQPVTVVCYLSPDQEILRYDLDM ATELAAQRHPQGKIIGIYAANDERVAQACDEYLHFDSPELTQLPEVFSGLLYVMFAQLLG LLRARQLGVTPDLPSNDGKVAKVCKVTIYGQD >gi|316918327|gb|ADCU01000016.1| GENE 23 24439 - 26718 2373 759 aa, chain + ## HITS:1 COG:YPO0671 KEGG:ns NR:ns ## COG: YPO0671 COG0188 # Protein_GI_number: 16120996 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Yersinia pestis # 1 747 1 747 757 1320 88.0 0 MSDLIHDGSERQALHTFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNN SAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFA AMRYTESRLSKYAEVLLGELGQGTVDYTPNFDGTLQEPKTLPARLPNILLNGTTGIAVGM ATDIPPHNVRELAKALVELIDKPSMTLDDILEHVQGPDYPTEAEIITPREEIRKIYRTGR GSVRMRAIWKKEDGEVVISALPHQTSGAKVLEQIASQMRAKKLPMVEDLRDESDHENPTR LVIVPRSNRVDMDQVMAHLFATTDLEKSYRINMNMIGLDNRPAVKNLLEILTEWLAYRRD TVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIHIIRTEDEPKPKLIERFGISETQAEA ILELKLRHLAKLEEVKIRGEQDELAKERDHLQALLASERKLNTLIKKEIQADAQAYGDDR RSPLQEREEAKAMSEHDFIPSEPVTIVLSEGGWVRSAKGHDIDPTGLSYKAGDSFRAAAR GKSNQPVVFIDSTGRSYALDPTTLPSARGQGEPLTGKLTPPPGATIEQVLMAADDQKLLM ASDAGYGFVCTFNDLVARNRAGKAMITLPENAKALPPIEINGADDMLLAITQAGRMLMFP VNDLPQLSKGKGNKIVSIPSAQAASGEDKLAWLFVLPPQTSITVHVGKRKLVMKPQELQK FRAERGRKGTLLPRGLQRIERVDVEMPEQIKVGPGDSEE >gi|316918327|gb|ADCU01000016.1| GENE 24 26936 - 27682 658 248 aa, chain + ## HITS:1 COG:STM3173 KEGG:ns NR:ns ## COG: STM3173 COG0204 # Protein_GI_number: 16766473 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Salmonella typhimurium LT2 # 1 241 1 241 245 406 78.0 1e-113 MLSIIRVVLVTLYCILACIFGCIYCLFSPRNPRHVATFGHMFGRLSPLFGLKVETRIPAE AKNYGNSIYIANHQNNYDMVTISNAVQTNTVTVGKKSLIWIPFFGLLYWLTGNLLIDRAN RAKAHNTIAQVVNQFRTKTISFWMFPEGTRSRGRGLMPFKTGAFHAAIAAGVPIVPVCAS NTNDKVKLNRWNNGLVIVEMLPPIDVTKYGKDQVRELSAYCHALMEAKINELNAEVAARE AQMREAKS >gi|316918327|gb|ADCU01000016.1| GENE 25 27809 - 29227 1143 472 aa, chain + ## HITS:1 COG:YPO0673 KEGG:ns NR:ns ## COG: YPO0673 COG2132 # Protein_GI_number: 16120998 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Yersinia pestis # 1 471 1 471 474 703 73.0 0 MSLSRRRFIQTSGLALCASALPLRAHASGSQVSLPIPPLLESKRGQPLFLTLQRSHWAFM SGRKVSTWGINGLYLGPTVRVYSGDDVKLIYSNRLPESVSMEISGLQVPGALSGGAARLM SPNVDWSPVLPIRQSAATLWYHANTPGHMAEHVYNGLAGMWLVEDENSKNLPLPNHYGVD DFPVIIQDKRLDNFGTPEYEAPSSGGFYGDSLLVNGVQEPFVEVSRGWVRLRLLNASNAR RYTLTMSDNRPFSVIASDQGYMPAPVIASSLTLAPGERREVLVDMSKGEEVSITAGVAAG IMDRLRGLFEPSSILISTTVLTLRPTGLLPLVTDNLPTRLLSDDMMEGSVVNTRSISLGS ASQPGINGAVWDLHRTDIQAQQGTWERWTVRADTPQAFYIQGAKFLVKSVNNAPPMVEDR GWKDTVWVDGEVSLMVYFPQASSEHFPFIYYSQTLELATRGSVGQLVVNAAQ >gi|316918327|gb|ADCU01000016.1| GENE 26 29407 - 31848 1799 813 aa, chain + ## HITS:1 COG:ynfE KEGG:ns NR:ns ## COG: ynfE COG0243 # Protein_GI_number: 16129545 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 12 813 8 808 808 1367 80.0 0 MNNKEKIHSEGISITRRSLVKGSALGGLALASGALNLPFMRNVQAAPVATPPPDKVTWGM CSVNCGSRCALRLHTRDNEVYWVETDNTGLDEYGDHQVRACLRGRSIRRRMNHPERLNYP MKRVGKRGEGKFKRIGWDEAYDEIANSLKYTVEKYGNEAVYQNYATGVIGGNVTRSSPYA SIIGRLMNCYGGYLSHYGSYSTAQISAAMPYTYGSNDGNSTSDIVNSKLVVMFGNNPAET RMSGGGITYHLEQARERSNAKMIVIDPRYTDTAAGREDEWIPIRPGTDAALVGGIAYVLI SENLVDQPFLDRYCVGYDEKTLPNSAPANGHYKAYILGQGPDGIAKTPEWASRITGIPAE RIIKLAREIGTAKPAYICQGWGPQRQANGEETARAIAMLPILTGNVGIHGGNSGARESTY LITIELMPVLTNPVKTSISVFTWTDAIRRGPEMTAKRDGVRGKDKLDVPIKFIWNYAGNT LINQHSDINKTHEILQDDTLCEKIIVIENFMTSSAKYADILLPDLMTTEQEDIVPNDYAG NMGYLIFSQPATSAKFERKGIYEIMSQIAKRLGSDVEQAFTEGRTQSDWLHYLYAKMQAR DPLLPDYETLRQQGIYKRKDPNGHFVAYQKFRQDPDANPLKTPSGKIEIYSERLAEIAAT WELEKDETISALPVYASTFEGWDDSLRAIYPLQMFGFHYKARTHSTYGNVDVLEAACRQE VWINPIDAQKRGIQNGDKVRVFNKRGTVIINAKVTPRIMPGVSAMGQGAWHQADMAGDKV DHGGCINTLTTMRPSPLAKGNPQHTNLVEIEKV >gi|316918327|gb|ADCU01000016.1| GENE 27 31888 - 32727 689 279 aa, chain - ## HITS:1 COG:STM4187 KEGG:ns NR:ns ## COG: STM4187 COG1414 # Protein_GI_number: 16767437 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 276 1 272 274 409 77.0 1e-114 MATTVPVKRGKKPRATTPAAAPAATGQVQSLQRGLRLLELIAESHGSVALTDLAQQAGLP NSTTHRLLSTMQQQGFVQQVGDLGLWTIASHAFFVGSSFLQSRNLLAIVHPILRRLMEDS GETVNLAVLDVSDFQAVIIDQVQCTQLMRMSAPIGGKLPMHASGAGKAFLSTVSDSHLVE LLHKKGLHSYTPHTRSNPTSLKEELAHIRKQGFSFDDEEHALGLRCIAACIYDEHQEAFA AISISGPVSRITDDRVIEIGALVIKAAKEVTLAYGGRHS >gi|316918327|gb|ADCU01000016.1| GENE 28 33031 - 36714 3283 1227 aa, chain + ## HITS:1 COG:YPO3722_2 KEGG:ns NR:ns ## COG: YPO3722_2 COG1410 # Protein_GI_number: 16123860 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase I, cobalamin-binding domain # Organism: Yersinia pestis # 327 1227 1 900 900 1615 87.0 0 MSTTVERLRHQLSQRILVLDGGMGTMIQGYRLTEEDFRGDRFADWQSDLKGNNDLLVLTK PDIISAIHYDYLEAGADILETNTFNSTRIAMADYHMESLSAEINYEAARLARACADEWTA RTPNKPRYVAGVLGPTNRTASISPDVNDPAFRNISFDQLVEAYRESTRALVEGGVDLIMI ETIFDTLNAKAAIYAVETEFEAMGVELPVMISGTITDASGRTLSGQTTEAFYNSLRHVKP LTFGLNCALGPDELRQYVAELSRIAECFVTAHPNAGLPNAFGEYDLGPKEMAEHIAEWAQ AGFLNIVGGCCGTTPAHIAAISRAVDGVKPRALPDIPVACRLAGLEPLTIDANTLFVNVG ERTNVTGSAKFKRLIKEDKYAEALEVALQQVESGAQIIDINMDEGMLDAEAAMVRFLNLI AGEPDIARVPIMIDSSKWEVIEKGLKCIQGKGIVNSISMKEGEDKFIEHARKVRRYGAAM VVMAFDEVGQADTRARKIEICRRAYKLLTETVGFPPEDIIFDPNIFAVATGIEEHNNYAV DFIEACADIKAELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAG QLAIYDDLPTDLRDAVEDVILNRREDGTERLLDLAEKYRGSKSDDDSNKPQAEWRSWPVK KRLEYSLVKGITEFIEADTEEARLEAERPIEVIEGPLMDGMNVVGDLFGDGKMFLPQVVK SARVMKQAVAYLEPFIEASKEKGTSAGKVLLATVKGDVHDIGKNIVGVVLQCNNYEIIDL GVMVPCDKILKTAREQNVDIIGLSGLITPSLDEMVYVAKEMERQGFDLPLLIGGATTSKA HTAVKIEQNYSGPTTYVSNASRTVGVVAALLSPTQKPDFVARTRKEYETVRIQHGRKKPR TPPVSLEAARENATSLDWSDYTPPVPHRLGVHQVTASIDTLRNYIDWTPFFMTWSLAGKY PRILEDEVVGEEAKRVFADANAMLDDLASSGKLNPRGVYGIFPANRVGDDVEIYSNEFRD EVLVTGHHLRQQTEKTDFANYCLADFVAPKSSGKSDYIGAFAVTGGLEEDALADAYEAQH DDYNKIMVKALSDRLAEAFAEYLHEKVRKVYWGYAANENLSNEELIRENYQGIRPAPGYP ACPEHTEKAAIWTLLDAENTVGMKLTESYAMWPGASVSGWYFSHPESKYFAVAQIQRDQV EDYAQRKGMPVAEVERWLAPNLGYDAD >gi|316918327|gb|ADCU01000016.1| GENE 29 37231 - 38181 730 316 aa, chain - ## HITS:1 COG:STM4195 KEGG:ns NR:ns ## COG: STM4195 COG0385 # Protein_GI_number: 16767445 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Salmonella typhimurium LT2 # 1 301 1 301 313 403 83.0 1e-112 MLALFTRLFPLWAVLLSISAYFTPTTFTGIGPYVSSLLMLIMFTMGVTLKIDDFKRVLSR PAPVAAGIFLHYLVMPLAAFLLAKAFHMPPDLSAGMVLVGSVASGTASNVMIYLARGDVA LSVTISSFSTLVGVFATPLLTRLYVDATISVDIMGMLISILQIVVIPIAAGLAIHHMFSK LVARIEPFLPALSMVCILAIISAVVAGSQSHIASVGLMVIVAVILHNSIGLLSGYWGGRL FGFDESTCRTLAIEVGMQNSGLAATLGKIYFSPLAALPGALFSVWHNLSGSLLAGYWQGR PTGDEKENKKVVSPES >gi|316918327|gb|ADCU01000016.1| GENE 30 38300 - 39649 1267 449 aa, chain - ## HITS:1 COG:YPO3719 KEGG:ns NR:ns ## COG: YPO3719 COG0527 # Protein_GI_number: 16123857 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Yersinia pestis # 4 449 16 461 461 691 82.0 0 MKNTIVAKFGGTSVANADAMQNSANIVLSNPNVRVVVLSASAGVTNLLVELADGCDQEKR HYVIDEIRRIQYSILDSLHQPSVLREEIDRMLENIAMLSEAAALATSPALTDELVSHGEL MSTLLFVELLRQRDVNVEWFDVRKIMRTNDRFGRAEPDTHALYELAQQQLVPRIQDAIVI TQGFIGSESKGRTTTLGRGGSDYTAALLGEALNAARVDIWTDVPGIYTTDPRIVSAARRI SEIGFSEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKDPSAGGTLVCNKTEQPPLFR ALALRRKQTLMTLHSLNMLHARGFLAEVFGILARHNISVDLITTSEVSIALTLDTTGSCT SGASLLTTSLLTELSSLCRVEVEENLALVALIGNKLSSACGVGKEVFGVMEPFNIRMICY GASSHNLCFLVPGENAENVVRALHTNLFE >gi|316918327|gb|ADCU01000016.1| GENE 31 40200 - 42002 1353 600 aa, chain - ## HITS:1 COG:PA3739_1 KEGG:ns NR:ns ## COG: PA3739_1 COG0025 # Protein_GI_number: 15598934 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Pseudomonas aeruginosa # 12 416 13 417 417 395 57.0 1e-109 MELSTPLMLVIIGISSLAAQWLAWRLRIPAILPLLLIGITLGPVTHVIAPDALFGELLFP LVSLSVAIILFEGSLTLRFEEIRGLGGVVRNLVSIGMLVTFAIISVSCWWLLGFSAELSA LVGAVTVVTGPTVIAPLMRVVRPKASINRVLRWEGIVIDPVGAIFTVLVFEFIVLRQNSE AWTHLFVTFGKTVVLGLLIGALFGYVLGIALRKVWIPRYLQNLAVLAVMLSAFGFSNAVA EESGLLAVTVMGIWLANMRDVDISDILAFKEELSAILISALFIILAARLDIGALWAMGWP LVIVLLIVQFVARPLCIAVSTVGSSLRWQEKALLSWIAPRGIVAAAVSSLFALTLQRMNY PEADKLVTVVFAVIIGTVVLQSLTSARLARWLGVQQQKPRGVLIIGANTVARAVAQALMK LKIPVMVTDSSWEYYRQARMDGIPAYYGHAYSEHAENYLDLSDTAQVLALSPNRHQNALA VYHFGHIFGERKVFSIRSSAQLKGRSNGESSRFRRHEILFNHEATYSRLSTLLSKGAVIK ATKLNENFGWVEYLEKHQGVIPLFAQKEDGSLQPVNENSVPAMPCTLVALVQGEHVTPSN >gi|316918327|gb|ADCU01000016.1| GENE 32 42336 - 43985 1516 549 aa, chain + ## HITS:1 COG:YPO3718 KEGG:ns NR:ns ## COG: YPO3718 COG0166 # Protein_GI_number: 16123856 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Yersinia pestis # 1 548 1 548 548 1007 88.0 0 MKNINPSQTAAWHALQQHFEQMKSVQMRDLFAQDADRFSKFSATFDDQMLVDFSKNRITT ETLEKLQALAKETDLQGAIASMFAGEKINRTEDRAVLHIALRNRSNTPIIVDGKDVMPEV NAVLAKMKQFCARVIGGEWKGYTGKTITDVVNIGIGGSDLGPYMVTEALKPYKNHLNMHF VSNVDGTHIAETLKTLNPETTLFLVASKTFTTQETMTNAHSARDWFLKSAGDEAHVAKHF AALSTNGKAVSEFGIDTANMFEFWDWVGGRYSLWSAIGLSIALSIGFDNFEQLLSGAHAM DQHFANTPIEQNLPVQLALIGIWYNNFFGAETEAILPYDQYMHRFPAYFQQGNMESNGKY VDRNGNPVTYQTGPIIWGEPGTNGQHAFYQLIHQGTKLVPCDFIAPAISHNALGDHHSKL LSNFFAQTEALAFGKSREEVEEEFAKAGKTAAEVAHIVPFKVFEGNRPTNSILLREITPY SLGLLIALYEHKIFTQGAILNIFTFDQWGVELGKQLANRILPELNGSEDVKSHDSSTNAL INRFKNWRA >gi|316918327|gb|ADCU01000016.1| GENE 33 44113 - 45360 892 415 aa, chain - ## HITS:1 COG:CPn0528 KEGG:ns NR:ns ## COG: CPn0528 COG1301 # Protein_GI_number: 15618439 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Chlamydophila pneumoniae CWL029 # 13 397 7 393 414 131 26.0 3e-30 MKILRHYGFTICLLLGIILGGLSGIIFGEKAAIVQPVGDLFLNLMFVVIVPLVFLSISSS IAEMKQMARLGKIMGTVFAVFLSTALIAAVIAFIGTQIYNPFQNVDVSTLIAHLPPAPDS HGKSLGEIIVNTFTVPDFLQLFTKSSLLPLIVFSVLLGLATSMSGEKGQPVADFLTAGTT VILRMVKIIMYAAPVGLGCYFAATVGHLGPQIINGYLNAFLLYLMLTVIYFFGANTLYAF VAGGKLGVKVFWSNVLTPAITAVATSSSAACIPANLVATKKMGVPDDIAETVIPLGANTH KDGSVIGGIIKIVFLFTLFHKDMSDPMSIAAIISVAFLVGAVMGAIPSGGMTGELMICSV FGFSPELVGTIMIISTIIDVPATLLNSTGNTVCAMMVTRFVEGKDWLKRRVCIQG >gi|316918327|gb|ADCU01000016.1| GENE 34 45601 - 46008 476 135 aa, chain + ## HITS:1 COG:YPO3717 KEGG:ns NR:ns ## COG: YPO3717 COG3223 # Protein_GI_number: 16123855 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 135 1 135 135 164 76.0 5e-41 MPGSKQSSTIAKILQWILNAGLLMLAVILVVFLGKETFTLGTVLFNASETASSYLLIEGI VIYFLYFEFIALIVKYFQSGYHFPLRYFIYIGITAIIRLIIVDHKSPADTLIYSAAILVL VVALYLANTEKLKRE >gi|316918327|gb|ADCU01000016.1| GENE 35 46255 - 47145 956 296 aa, chain - ## HITS:1 COG:YPO3716 KEGG:ns NR:ns ## COG: YPO3716 COG3833 # Protein_GI_number: 16123854 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Yersinia pestis # 1 296 1 296 296 495 91.0 1e-140 MAMVQPKSQRLRLLFTHLMMLAFICMIMFPLLMVIAISLRSGNFATGSLIPEKISWEHWQ LALGMTVTNADGSITPPPFPVLLWLWNSIKIAVITAVGIVTLSTTCAYAFARMKFKGKSS LLKGMLIFQMFPAVLSLVALYALFDRIGQYVPFLGLNTHGGVIFAYMGGIALHVWTIKGY FETIDNSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV NSYTLAVGMQQYLNPQNYLWGDFAAAAVLSAIPITAVFLLAQRWLVGGLTSGGVKG >gi|316918327|gb|ADCU01000016.1| GENE 36 47162 - 48733 1227 523 aa, chain - ## HITS:1 COG:YPO3715 KEGG:ns NR:ns ## COG: YPO3715 COG1175 # Protein_GI_number: 16123853 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Yersinia pestis # 1 523 1 525 525 830 79.0 0 MSLSHTEYPIAKPDKWWQSDILKWIVIAAMCLFTGYLTIVMYAQGEYLFAMLTLVLLGSG LYIFANRKAYAWRYVYPGLAGMGLFVLFPLICTIAIAFTNYSSTNQLTFERAQSVLMQRQ FTTGKTYGFGLYPEGKQWRLQLADSENGQFYISEPFSFSAQEQRLTMKPESAELTGERAT LRVITQNRQALNNIVAVLPQNGELRMSSLRQFAGTSPLYSLEKDGETLKNNQTGTLYRPN TDIGFYQAVNAQGQWENEQLSPGFTVSIGWKNFMRVVQDEGIRQPFVSIFIWTIIFSVLT VVFTVAVGMVLACVVQWEALKGKAIYRVMLILPYAVPSFISILIFKGLFNQSFGEINMLL SHLFGIKPAWFSDPLTAKSMILIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPM QNFFRITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDMLGTSTPAGYTDLLVSYT YRIAFEGGGGQDFGLAAAIATLIFLLVGALAILNLKASKMNFD >gi|316918327|gb|ADCU01000016.1| GENE 37 48853 - 50043 1353 396 aa, chain - ## HITS:1 COG:ECs5017 KEGG:ns NR:ns ## COG: ECs5017 COG2182 # Protein_GI_number: 15834271 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 674 84.0 0 MTKKSGIRTLALSALATLVLSSSAFAKIEEGKLVIWINGDKGYNGLAEIGKKFEKETGIK VLVEHPDKLEEKYPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIHPSKAFQDKLYPFTW DAVRYNGKLIAYPVAVEALSLIYNKDILPEPPKTWEEIPALDKELRAKGKSAIMWNLQEP YFTWPIIAADGGYAFKYDNGTYNIKDVGVNNAGSQAGLQFIVDLVKNKHINADTDYSIAE AAFNKGQTAMTINGPWAWSNIDKSNINYGVALLPTFKGHPSKPFVGVLSAGINAASPNKE LATEFLENYLMTNAGLEQINKDKPLGAVALKSYQESLEKDPKIAATMQNAQKGEIMPNIP QMSAFWYAERSAIINAVNGRQSVKEALTGAEQRITK >gi|316918327|gb|ADCU01000016.1| GENE 38 50555 - 51664 1130 369 aa, chain + ## HITS:1 COG:YPO3712 KEGG:ns NR:ns ## COG: YPO3712 COG3839 # Protein_GI_number: 16123850 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Yersinia pestis # 1 369 1 369 369 660 88.0 0 MASVALRNVYKAYGDVVISKDVNLEIQDGEFVVFVGPSGCGKSTLLRMIAGLEDITSGEL LIGGKRMNEVPPAERGIGMVFQSYALYPHLSVADNMSFGLKLAGTKKAEITQRVNQVSEV LQLAHLLDRRPKALSGGQRQRVAIGRTLVAEPDVFLLDEPLSNLDAALRVQMRIEISRLH KRLERTMIYVTHDQVEAMTLADKIVVLDGGSVAQIGKPLELYHYPANRFVAGFIGSPKMN FLPVKVTAAEPQRVQIELPNRQQVWLPVEGTNVQVGSNLSLGIRPEHLLPSHDAEVTLEG DVQVVEQLGNETQIHIQIPAIRQNLVYRQNDVVLVDEGAKFAIGLPPERCHLFREDGVAC RRLHKELGV >gi|316918327|gb|ADCU01000016.1| GENE 39 51771 - 53063 1323 430 aa, chain + ## HITS:1 COG:YPO3711 KEGG:ns NR:ns ## COG: YPO3711 COG4580 # Protein_GI_number: 16123849 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Yersinia pestis # 1 430 2 423 423 631 75.0 0 MTLRKVPLALAVASAVLSTQALAVDFHGYARSGIGWTASGGEQQCFKATGAQSKYRLGNE CETYAELKLGQELWKDGDKSFYFDTNVAYSVQQTNDWEATDPAFREANIQAKNVIEWAPG STLWAGKRFYQRHDVHMIDFYYWDISGPGAGLENIDLGFGKLSVAATRNTETGGSNGFSS QEQRDLIKDTANDVYDVRLAGLETNPGGTLELGFDYGRSNLTDGYHRAKDASKDGVMLTA EHTQAIYSGFNKFVVQYATDSMTSNNSGHSEGSSINNNGHMIRILDHGGIDFNDKWALMY VGMYQDIDRDDKNGTTWYTAGIRPMYKWTPIMSTLLEFGYDNVKSQRTGDNNNQYKVTLA QQWQAGDSIWSRPAIRLFATYAKWDEKWGYATKDDTGYSDGVAYNDNNTHKFSRGNDDEV TFGAQMEVWW >gi|316918327|gb|ADCU01000016.1| GENE 40 53162 - 54121 781 319 aa, chain + ## HITS:1 COG:no KEGG:YPO3710 NR:ns ## KEGG: YPO3710 # Name: malM, molA # Def: maltose regulon periplasmic protein # Organism: Y.pestis # Pathway: not_defined # 17 319 7 309 309 334 63.0 2e-90 MKNKMKSKMNNKIKAVMTKNIVALSVAVAMFSAMPLSAQADSTIQPANVVTAPAIPTATL QQLPWEPLVPPVTKTALLNGSSAQLHVGDIQGAVGAFTLPADRGSLEITISSLVDAKKVY APSVMVLDENMRPAAFYPSSYFSYQQPGVMSGDRLEGTLKLTPALGQKQIYLVIYTTSQD LAKTTQMVDPAKAYAAGVGNAVPNIPDPIAIHQSTGTIKIKVKAEQNTGNVMIGGILPMA PKEQPVVVGSSAPVSTPIAAPAKPAQPMLKDTDEYFNSGIRAAVKAGDIDKALKLMNEAE QLGSTTARETFIRSVKGKG >gi|316918327|gb|ADCU01000016.1| GENE 41 54330 - 54845 399 171 aa, chain + ## HITS:1 COG:YPO0310 KEGG:ns NR:ns ## COG: YPO0310 COG3161 # Protein_GI_number: 16120648 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate synthetase (chorismate lyase) # Organism: Yersinia pestis # 8 165 9 166 174 181 58.0 4e-46 MTDRHPSLDVTHWHLIHDVSLTATQQSWLGECQSMTARFERHCGKVTIVPQREGFIGVDS LGEELTQLPDCERFWLREVLLCGDNVPWLFGRTLIPETSLTGEEVSLLTLGTVPLGRYLF KAAELTRDFIQVGEQGELWARRSRLRLSGKPLLLTELFLSESPLYGVNNEL >gi|316918327|gb|ADCU01000016.1| GENE 42 54882 - 55739 631 285 aa, chain + ## HITS:1 COG:YPO0311 KEGG:ns NR:ns ## COG: YPO0311 COG0382 # Protein_GI_number: 16120649 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Yersinia pestis # 3 284 7 288 288 404 81.0 1e-112 MTQTKWQAYCRLMRIDKPIGSLLLLWPTYWALWLAGGQVPSLKLLVVFTLGVFFMRAAGC VVNDFADRRVDGHVKRTAQRPLPSGAVTEKESKALFVILVLISFGLVLTLNAMTIWLSVA GLALAWVYPFMKRFTHLPQVVLGMAFGWSIPMAYAAVSESLPLSCWLLFLANICWTVAYD TQYAMVDRDDDLKIGIKSTAILFGRFDKLIIGLLQLATLLLMVWIGYLNQLSGAYYWGIL LAGALFIHQQKLIAQRERMPCFQAFLNNNYAGLVLFIGIVLSIWS >gi|316918327|gb|ADCU01000016.1| GENE 43 55811 - 58288 2357 825 aa, chain - ## HITS:1 COG:YPO0312 KEGG:ns NR:ns ## COG: YPO0312 COG2937 # Protein_GI_number: 16120650 # Func_class: I Lipid transport and metabolism # Function: Glycerol-3-phosphate O-acyltransferase # Organism: Yersinia pestis # 1 805 1 804 825 1351 83.0 0 MSGWRKVYYKLLNLPLKLLVKSKVIPSEPVAELRLDTTRPVLYVLPYNSKADLLTFRDRC LAQDLPDPLDDNEIDGTILPRYVFIDDGPRVFRYYAPKQESVKLFHDYLDLHRNNPALDI QMIPVSVMFGRSPGREGHNGAPQLRLLNGVQKFFAVIWLGRDSFVRFSNVVSLRYMADEH GTDQTIAQKLARVARMHFSRQRLAAVGPSLPDRQALFNKLLSSKAIEKAVEDEARSKKIS REKAQQNAVALMEEIAANFTYEAVRLSDRVLSWTWNRLYQGINVHNAERVRKLAQDGHEI VYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNK LYSTVFREYLGELFSRGYSVEYFMEGGRSRTGRLLEPKTGTLAMTIQAMLRGGKRPITLV PVYIGYEHVMEVATYAKELRGATKEKESLIQMVRGLRKLRNLGQGYVNFGEPIPINNWLN QHVPEWRESIDPIEAQRPSWLTPTVNAIANTVMVNINKSAAANAMNLCSTALLASRQRAL TREQLLEQLDCYLQLLRNAPYAEDATTPNQTPEELLQHALQMGKFEVEKDNIGELIILPR EQAVLMTYYRNNIQHMLVLPSLIANMVMNHNRISRTELLRQVDLLYPMLKEELFLHHDRS DLPQVIEPIITELCRQQLICAKGDELVMNPGRIRTLQLLAAGVRETLQRYAITFSLLSAN PSISRGALEKESRIMAQRLSVLHGINAPEFFDKAVFATLVGTLRSEGYINDVGDAIPEHT MEIYNLLSAMITPEIKLTIESVSAPEIETLPPAQTEAVKEEEKDD >gi|316918327|gb|ADCU01000016.1| GENE 44 58473 - 58838 395 121 aa, chain + ## HITS:1 COG:STM4236 KEGG:ns NR:ns ## COG: STM4236 COG0818 # Protein_GI_number: 16767486 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Salmonella typhimurium LT2 # 2 120 3 121 122 136 63.0 9e-33 MNSTTGLTRIVKAAGYSVKGLKAAWKHEAAFRQELGLMIVAVVIAAWLDVTIVERILLIG CVTLVVILEIVNSAIEAVVDRIGSEFHELSGRAKDMGSAAVFVALWLSAFIWVSILWGHY M >gi|316918327|gb|ADCU01000016.1| GENE 45 58920 - 60383 1267 487 aa, chain - ## HITS:1 COG:STM0618 KEGG:ns NR:ns ## COG: STM0618 COG0471 # Protein_GI_number: 16763995 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Salmonella typhimurium LT2 # 1 487 1 487 487 807 91.0 0 MSVSKDKIWKLIAPLAVMAIMLLIPVPDGMPPQAWHYFAIFVAMIVGMILEPIPATAISF IAVTICVIASQYVLFDAKELADPAFDASSKALKWGLAGFSSTTVWLVFGAFIFALGYEVT GLGRRIALFMVKFMGKRTLTLGYAIVIIDIMLAPFTPSNTARTGGTVFPVIKNLPPLFKS FPNDPSSRRIGGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVNKIAGIQISWLQWFLSF LPVGLILLIVAPWLSYVLYKPEVTHSEEVSSWAGEALKEMGRLTRKEITLIGLVLLSLGL WVFGGDFIDATAVGMLAVSLMLALHVVPWKDITKYNSAWNTLVNLATLVVMANGLTRSGF IDWFANTMSTHLEGFSPNATVIVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVP MEHLCILLVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISLLLLVGW PILALWS >gi|316918327|gb|ADCU01000016.1| GENE 46 60415 - 61335 644 306 aa, chain - ## HITS:1 COG:ECs0652 KEGG:ns NR:ns ## COG: ECs0652 COG1767 # Protein_GI_number: 15829906 # Func_class: H Coenzyme transport and metabolism # Function: Triphosphoribosyl-dephospho-CoA synthetase # Organism: Escherichia coli O157:H7 # 22 299 21 292 292 395 75.0 1e-110 MMPIKQQPSDCAAIDEHSVAYYSELAYRAMLAEVNLTPKPGLVDRNNCGAHKDMALEDFH RSALAIRQWLPRFIEFGACSANLPAVDVLIGLRPIGIACETDMFRATAGVNTHKGSIFSL GLLCAAIGRLHTLHRLITPELICSTAAAFCRGLTERELQSTINNHKNQPSQTAGQRLFQQ LGLTGARGEAEAGYPLVIQLALPHYRDRLAQGIDPELALLDTLLVLMAHNGDTNVASRGG PSGLSWLQQRAKALLCQGGIRHPSDLRHLHDFDQECIQRNLSAGGSADLLIITWFLAQIS HSNYQH >gi|316918327|gb|ADCU01000016.1| GENE 47 61307 - 61861 607 184 aa, chain - ## HITS:1 COG:STM0620 KEGG:ns NR:ns ## COG: STM0620 COG3697 # Protein_GI_number: 16763997 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) # Organism: Salmonella typhimurium LT2 # 4 179 3 178 183 218 64.0 4e-57 MFYLLPTLATSHTVTLPELLFSRECRQSRQTEWLARHTSTLISFTVVAPGPIKDSVMTRK IFNHGLKALCQRAEQSGWEIKEQASFALATGPEGLLAIDAPARVVKEAMIALEHEQLLGR LWDIDVLNPLGKILSRRDFSLPSRTCLLCNREAALCARERAHPIPDLITRMEALLHDADK AAAV >gi|316918327|gb|ADCU01000016.1| GENE 48 61865 - 63397 1404 510 aa, chain - ## HITS:1 COG:STM0621 KEGG:ns NR:ns ## COG: STM0621 COG3051 # Protein_GI_number: 16763998 # Func_class: C Energy production and conversion # Function: Citrate lyase, alpha subunit # Organism: Salmonella typhimurium LT2 # 1 510 1 509 509 894 88.0 0 MTQKKELLQRQERVSAYARQTESDLPSYKNVSKLNLQAQKPRDKKLCSTLEEAIRRSGLH DGMTISFHHAFRGGDLTINLVMATIAQMGFKNLTLASSSLSDCHAPLVDHIRNGVVSRIY TSGLRGPLAEEISRGLLDEPVQIHSHGGRVHLVESGELNIDVAFLGVPACDPFGNANGYT GKACCGSLGYAKVDAENAKQVVLLTEALLPYPHNPASIMQDQVDLIVQIDQVGDADKIGA DATRMTSNPRELLIARSAADVVVNSGYFKEGFSLQTGTGGASLAVTRFLEDKMRSRDIHA GFALGGITSTIVDLHEKGFIKKLLDVQSFDRAAAESLARNPNHIEISANQYANWGSKGAS VDRLDVVVLSALEVDTHFNVNVLTGSDGVLRGASGGHCDTAVAAALSIIVAPLVRGRIPT LVDEVTTCVTPGSSVDILVTDHGIAVNPARPELADRLKAAGLKVVSIEWLRERAQILTGQ PRAIEFTDRVIAVVRYRDGSVIDVVRQVKE >gi|316918327|gb|ADCU01000016.1| GENE 49 63408 - 64316 1155 302 aa, chain - ## HITS:1 COG:STM0622 KEGG:ns NR:ns ## COG: STM0622 COG2301 # Protein_GI_number: 16763999 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Salmonella typhimurium LT2 # 1 302 1 302 302 478 89.0 1e-135 MTSRIAQERKSRTRRSMLFVPGANAAMVSNSFIYHADALMFDLEDSVVLREKDAARRLVY HALQHPLYQDIETIVRVNALDSEYGVADLEAVVRGGADIVRLPKTDTAQDVIDIENEIAR IEAECGREVGSTGLLAAIESAQGITQAVAIAHASPRLIGIALGAEDYVRNLRTERSPEGV ELLFARCSILQAARSAGIQAFDTVYSDANNEEGFLREAAHIKQLGFDGKSLINPRQIELL HNLYAPTQKEVDHAKLVVEAAEASAREGRGVVSLNGKMVDSPVIERARLVLSRAELSGIR EE >gi|316918327|gb|ADCU01000016.1| GENE 50 64313 - 64558 198 81 aa, chain - ## HITS:1 COG:STM0623 KEGG:ns NR:ns ## COG: STM0623 COG3052 # Protein_GI_number: 16764000 # Func_class: C Energy production and conversion # Function: Citrate lyase, gamma subunit # Organism: Salmonella typhimurium LT2 # 1 80 18 97 98 120 80.0 7e-28 MVRIAPIDTQDIDLQISSSVQKQFGDAIRATVLEILERHDIRGVQLIVDDKGALDCILRA RLETLLVRASDVKNLPWEDRA >gi|316918327|gb|ADCU01000016.1| GENE 51 64606 - 65682 805 358 aa, chain - ## HITS:1 COG:STM0624 KEGG:ns NR:ns ## COG: STM0624 COG3053 # Protein_GI_number: 16764001 # Func_class: C Energy production and conversion # Function: Citrate lyase synthetase # Organism: Salmonella typhimurium LT2 # 1 358 1 358 358 588 78.0 1e-168 MFGNTVFSQVKRSENKKIATIAHFLRENGLSIDSTVEVFITVTRDDQLIACGGIAGNIIK CVAISESVRGEGLALTLATELINLAYEKHCTHLFIYTKTQNEALFKQCGFYTVTSVPNIM VLMENSATRIQRYASYLTTLRHDGNKIGSIVMNANPFTNGHRYLVQQAAAQCDWLHLFLV KEDTSRFPYEDRLELVRAGTSDIKNLTVHRGSEYIISRATFPCYFIKEQGVVDDCYTEID LKIFRQYLAPALGITHRFVGTEPYCEVTAKYNRDMRHWLETPSLSAPPIELVEIERLRYH DTAISASWVRKLLVQKDLPAITPLVPEATRAYLQRLLVPRSENVTDRPQESALATGEK >gi|316918327|gb|ADCU01000016.1| GENE 52 66074 - 67735 1142 553 aa, chain + ## HITS:1 COG:STM0625 KEGG:ns NR:ns ## COG: STM0625 COG3290 # Protein_GI_number: 16764002 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Salmonella typhimurium LT2 # 1 549 1 549 553 901 82.0 0 MFGRPNVKEFRFFSRLAFPLRIFLLLLLVSTLLIAALGKYLSASFEDYLSNHVRDMAMNQ AKIIASIDSVVTAVKNRDTKRLAIIADKLGTGSDFDYVVIGDKNSIRLYHPNPAKIGYPM QWSKPGALARGESYFITGKGSIGMAMRAKTPIFDEHGNVIGVVSLGYLVSKIDSWRLDFL LPMGGVFVLILIILMLLSWMFATHIRRQMLGMEPHQIARVVRQQEALFGSVYEGLIAVDP EGLITAINRNARKMLGLSSPGRQWLGKPISDVVEPAGFFTEQIEEKRQDVICTFNGLSVI ANRAAIRSGNELLGAIISFRSKDEISTLNAQLTQIKQYVESLRTLRHEHLNWMSTLNGLL QMKEYDRALAMVKGESQAQQQLIDSLRGSFDDRQVAGLLFGKAQRARELGLTLNLVEGSQ LRQLPAGLDSTEFAAIVGNLLDNAFDASLKNPQGNKTIELYLSDEGDDVIVEVADQGCGV PESLREAIFEQGVSTKTEDVGEHGIGLYLIASYVGRCGGVITLEDNEPCGTLFSVFIPKV KKTYDTTNNDSNS >gi|316918327|gb|ADCU01000016.1| GENE 53 67704 - 68402 242 232 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 5 224 1 222 226 97 25 5e-19 MTQPITILIVEDETPLAEMHAEFIRHFHGCGQVWLAGNLAQARMMVERFKPDLILLDNYL PDGKGITLLHELTQARFSGGVVFTTAASDMDTVSDAVRCGVFDYLVKPIAYERLGQTLDR YHQRMRMLASNNSASQRQIDDMFNAYARGEHKEELPVGIDALTLDKVQGLFADLDARHTA ETVAQELKLSRTTARRYLEFCAGRHMIMAEIVYGKVGRPQRTYRALETVKNS >gi|316918327|gb|ADCU01000016.1| GENE 54 68568 - 69176 784 202 aa, chain + ## HITS:1 COG:YPO0314 KEGG:ns NR:ns ## COG: YPO0314 COG1974 # Protein_GI_number: 16120652 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Yersinia pestis # 1 202 1 202 202 361 92.0 1e-100 MKALTARQQEVYDLIRDHIEQTGMPPTRAEIAQRLGFRSPNAAEEHLKALQRKGVIEIVS GASRGIRLLMEDETGLPLIGRVAAGEPLLAQEHIEGHYQVDPSLFKPNADFLLRVNGMSM RDIGILDGDLLAVHKTQDVRNGQVVVARIEDEVTVKRLKKQGNIVQLLPENSDFEPIVVD LREQNFTIEGLAVGVIRNGDWI >gi|316918327|gb|ADCU01000016.1| GENE 55 69285 - 70619 813 444 aa, chain + ## HITS:1 COG:STM4238 KEGG:ns NR:ns ## COG: STM4238 COG0534 # Protein_GI_number: 16767488 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Salmonella typhimurium LT2 # 1 438 1 438 441 535 74.0 1e-152 MKLLTPTDKALWILALPMILSNISVPLLGLVDTAVIGHLDSPVYLGGVAVGAMATSFLFM LLLFLRMSTTGLTAQAFGAGDKTALARALVQPLLLALLAGVVIIAVREPLIEGVLRIVGG HQDVLEQARLFMHIRWLGAPATLANLVILGWLLGVQYARAPVILLVVGNLINITLDLWFV VGLSWKVQGAASATVIADYATFLLGIGLVWHVMKLRGLHMEYFRNAWRGNLRRLLALNRD IMLRSLLLQLCFSSLTILGARMGSEIVAVNAVLMNLLTFTAYALDGFAYAVEAHSGQAYG ARDGRRLQSIWHSACRQAGIVAIFFALLYALFGGHIIQMLTSLPDVQALAAHYLPWQILL PLLGVWCYLLDGMFIGATRGTEMRNSMAVAAVGYGLTLFTLPWLGNHGLWLALAVFLSLR GLSLWIVWRRHWRSNTWFEANNIY >gi|316918327|gb|ADCU01000016.1| GENE 56 70965 - 71174 325 69 aa, chain + ## HITS:1 COG:STM4240 KEGG:ns NR:ns ## COG: STM4240 COG3237 # Protein_GI_number: 16767490 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 69 2 70 70 84 82.0 4e-17 MNKDQAGGNWKQFKGTVKEKWGKLTDDDLTVIEGKRDQLVGKIQERYGYQKEAAEKEVKA WEEHNKYRW >gi|316918327|gb|ADCU01000016.1| GENE 57 71363 - 71872 340 169 aa, chain - ## HITS:1 COG:YPO0315 KEGG:ns NR:ns ## COG: YPO0315 COG0735 # Protein_GI_number: 16120653 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Yersinia pestis # 1 169 1 169 169 231 71.0 6e-61 MTTTSLERLLAQAEQICLQRNVRLTPQRMEVLRLMACQKGTISAYDLLDLLRVSEPQAKP PTIYRALDFLLEQGFIHKVESTNSYVMCHHIEEPSHTSALFICHRCGQVTEQTTKEVQEH LEKLAALTGFSLQHSVVEAHGLCRDCGKIESCDSRDTCHHDHSEPKKKK >gi|316918327|gb|ADCU01000016.1| GENE 58 72050 - 72352 304 100 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKTSIVLSAIVALTLTGSAFAQSFSELSPAEQSTLAYSNRNGSSYAHQLMAQQKLEQAGI ERSSINGSATFSQLSTQDQRATIINNLNNSDAYAHQSEIK >gi|316918327|gb|ADCU01000016.1| GENE 59 72474 - 72635 181 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKTMTLTVLMTLALAGSAFAQSFSDMTASEQRATVVNHLNNGSAQAHQVTLNK >gi|316918327|gb|ADCU01000016.1| GENE 60 72757 - 73362 466 201 aa, chain - ## HITS:1 COG:YPO2378 KEGG:ns NR:ns ## COG: YPO2378 COG1309 # Protein_GI_number: 16122601 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 199 1 199 199 211 53.0 9e-55 MNKTTSTTNNTCEHILDVGEELILNLGFTAMGLNELLATAGVPKGSFYHYFKSKEKFGEA MLTRYFSDYVVMLKEKFSDGQKTQRQHLLDYFSHWMTQSCETVCHSKCLVVKLAGEVSDL SEVMREALDSGITRVIAQLQSSIESGVEEGSLAIDESPELLADSLYSLWLGAALRAKVNR SDAPFVSAMQRTERLLKPGTI >gi|316918327|gb|ADCU01000016.1| GENE 61 73691 - 74704 953 337 aa, chain + ## HITS:1 COG:ECs5031 KEGG:ns NR:ns ## COG: ECs5031 COG0042 # Protein_GI_number: 15834285 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Escherichia coli O157:H7 # 7 336 11 345 345 564 79.0 1e-161 MTQNATNLSSAMPFSQSRFSVAPMLDWTDRHCRYFHRKLSRQTLLYTEMVTTGAIIHGKG DYLAYSEEEHPLALQLGGSDPEALAHCARLAEQRGYDEVNLNVGCPSDRVQNGRFGACLM GEAQLVADGIKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFIDIVSGKGECNSFTVHARK AWLSGLSPKENREIPPLDYERVYQLKRDFPHLNIAINGGVKTLEEAKIHLQHLDGVMMGR EAYQSPSILAHVDRELFDSTADVPNSIDVVRSLYPYIERELSNGTYLGHITRHILGLFQS IPGARQWRRHLSENAHKPGAGVEVVEAALQFVSQSRG >gi|316918327|gb|ADCU01000016.1| GENE 62 74864 - 75088 237 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|258638997|ref|ZP_05731728.1| ## NR: gi|258638997|ref|ZP_05731728.1| phage shock protein G [Pantoea sp. At-9b] # 3 63 2 62 88 65 65.0 1e-09 MFEVLFILGFFAVLMVTGVSMLGIIAAMAVATVLMLFGGLFVMVLKLLPWIVLAIVVVWI YRSMQKKPQPRRYY >gi|316918327|gb|ADCU01000016.1| GENE 63 75517 - 76503 962 328 aa, chain - ## HITS:1 COG:YPO0319 KEGG:ns NR:ns ## COG: YPO0319 COG0604 # Protein_GI_number: 16120656 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Yersinia pestis # 1 327 1 327 327 484 77.0 1e-137 MAKRIQFSAHGGPEVLEYVDFDPKDPAAGEVQVSNKAIGINYIDTYIRGGLYPVSQFPSG LGTEASGVVTKVGAGVTSIEVGDRVVYAQSALGAYSSVHNVPAEKVALLPNAISFEQGAA SFLKGLTVHYLLRQTYEIKAGEIFLFHAAAGGVGQIACQWAKALGAKLIGTVGSDAKAER AKQAGAWATINYQTEDIAQRVAELTQGEKVNVVYDSVGKSTWLASLDSLKKRGLMVSFGN ASGPVTGVDLGILNQKGSLYVTRPSLNGYINNHQDLLSASHELFSMIASGAISVDVPDTQ KFALSDARKAHEVLQSRGTQGSSLLIPE >gi|316918327|gb|ADCU01000016.1| GENE 64 76603 - 78012 1325 469 aa, chain + ## HITS:1 COG:YPO0320 KEGG:ns NR:ns ## COG: YPO0320 COG0305 # Protein_GI_number: 16120657 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Yersinia pestis # 1 469 1 468 468 811 91.0 0 MAGNKPTNKSNETPRDRQMEGLKLPPHSLEAEQSVLGGLMLDNERWDNVAERVVANDFYS RPHRLIFTEMQRLLEMSKPIDLITLSESLEQRGELESVGGFAYLAELSKNTPSAANIGAY ADIVRERAVVRDMISVANEIADAGYDPQGRSSEDLLDLAESRVFQIAENRANKDEGPKSV DRILEQTVARIEQLYQTPHDGVTGVDTGYQDLNKKTAGLQRSDLIIVAARPSMGKTTFAM NLCENAAMTQDKPVLIFSLEMPGEQIMMRMLASLARVDQTKIRTGQLDDEDWARISSTMG ILLEKRNMYIDDSSGLTPTEVRSRARRIFREHDGLSLIMIDYLQLMRVPSLSDNRTLEIA EISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDE VYHENSDLKGIAEIILGKQRNGPIGTVRLTFNGQFSRFDNYAGPQYDDE >gi|316918327|gb|ADCU01000016.1| GENE 65 78093 - 79172 1119 359 aa, chain + ## HITS:1 COG:YPO0321 KEGG:ns NR:ns ## COG: YPO0321 COG0787 # Protein_GI_number: 16120658 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Yersinia pestis # 1 359 1 359 359 582 79.0 1e-166 MKAATAVIDRRALRHNFQQIRQFAPHSRLIAVVKANAYGHGLLETAKTLKDADCYGVARI GEALKLRSGGIVKPILMLEGFFSADDLPVLVANNIETAIHSEEQLQALEEAELERPVKVW MKLDTGMHRLGVRPEQADAFYTRLSNCRNVEQPVNIMSHFSRADEPETGMTEAQLACFDA FATGKPGLQSIAASGGILLWTQSHRDMVRPGIILYGVSPLAEPYADHYGLQPVMTLKSSL IAVREHKAGEPVGYNGTWVSQRDTRLGVVAIGYGDGYPRSAPSGTPVLVNGREVPIVGRV SMDMISVDLGPEAKDKVGDEVVLWSAELPVEKIAKYTGISAYELITKLTPRVTMEYVGE >gi|316918327|gb|ADCU01000016.1| GENE 66 79238 - 80395 1301 385 aa, chain - ## HITS:1 COG:YPO0678 KEGG:ns NR:ns ## COG: YPO0678 COG1979 # Protein_GI_number: 16121001 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Yersinia pestis # 1 385 1 385 385 607 76.0 1e-174 MQNFTLHTPTKVLFGKGQIANLRNEVPENARILITYGGGSVKRTGVLDQVHAALKGLHVF EFGGIEPNPSYETLMKCVELVRNEKIDFLLAVGGGSVIDGTKFIAAAADYVGEPWDILET YGSKIEKAIPLAAVLTLPATGSEMNKGAVITRRSTGDKRAFQSPYVMPKFAILDPVVTYT LPAHQVANGVVDAFVHTVEQYLTYPVDAKIQDRFAEGILLTLIEEGPRALAEPENYDVRA NVMWSATMALNGLIGAGVPQDWATHMLGHELTALHGMDHAQTLAVVLPSLLQAKRQQKHA KLLQYAERVWNIREGNEEQRIDAAIAATRKFFEEMGIKTYLKDYGVDATSIPTLLAKLKE HGMTALGENSDITLEDSRKIYEASL >gi|316918327|gb|ADCU01000016.1| GENE 67 80602 - 81513 641 303 aa, chain + ## HITS:1 COG:YPO0679 KEGG:ns NR:ns ## COG: YPO0679 COG2207 # Protein_GI_number: 16121002 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 9 294 10 295 297 382 62.0 1e-106 MLIDERWKQLAQQLSRQITQTGVSASPIENVKIIYADEHHPRTPVMYEPCIIIVLQGHKV GYLGEKVFRYDPTNYLLMTLPLPCECETFATPDEPLIGLSVRVNTSMLQDLLMDIGDGLV AKQRCQSSGVKSVSLDESMFCATERLVDAMENPLQARVLGPQIVREMLFHALCGEGGEAL QALANRHSHFSQIAKALRLIEQQYSDSLNVDLLAQEVNMSVSAFHHNFKAVTATSPLQYI KSFRLHKARMMMLHDGLKASTAAIRVGYESASQFSREYKRFFGNTPSEQMTRYREGGLSI VER >gi|316918327|gb|ADCU01000016.1| GENE 68 81545 - 82828 840 427 aa, chain + ## HITS:1 COG:Cgl0575 KEGG:ns NR:ns ## COG: Cgl0575 COG0596 # Protein_GI_number: 19551825 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Corynebacterium glutamicum # 8 417 19 417 427 273 40.0 5e-73 MIEREYLVAGMQVREHRLDVPLNWFDASDPRRISIFARELSIAGRNADGLPCLLFLQGGP GGKCPRPTSQSGWLAEALKSFRVILLDQRGTGQSSRIESSSIRGSSPQQIADYLRCFRAD SIVADAEHLRKTQFGGRKWSTLGQSFGGFITLTYLSQAPQGLEACYITGGLPAIQPNAEL LYQRTYQKLREKNQIFFSRYPHMRQQINRIADVLSEQEVYLPDGDILTTQRLQTLGIQLG MSEGYESLLWLFDEAFNQDGELSDTFLTQVMNLTGFAEHPLYAVMHESIYADDNSGATNW AAQRVHNTLPEFHAEQRPLLLTGEMIYPWMFAEMQTLRPFQEAVSLLAESERWSPLYDAD RLKANQVPVVAAVYYNDMYVDVGLSLETASHIGNLETWITSEYEHNGLRVGNVFSHLRQM MALRGVA >gi|316918327|gb|ADCU01000016.1| GENE 69 82895 - 83221 451 108 aa, chain - ## HITS:1 COG:YPO0950 KEGG:ns NR:ns ## COG: YPO0950 COG3171 # Protein_GI_number: 16121253 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 108 1 108 108 167 75.0 3e-42 MAKNRSRRLRKKMHIDEFQELGFSVSWNFEEGTGIDIIDSTVDKFIDEAIEPNGLAFDGS GYLAWEGLICLQQIGQCTEEHQKLVKEWLESHGMKNVVVSDLFDVWWD >gi|316918327|gb|ADCU01000016.1| GENE 70 83221 - 83937 651 238 aa, chain - ## HITS:1 COG:YPO0951 KEGG:ns NR:ns ## COG: YPO0951 COG0220 # Protein_GI_number: 16121254 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Yersinia pestis # 1 238 2 239 239 409 78.0 1e-114 MNDVVSPEFDENGRVMRRIRSFVRRQGRLTKGQQFALDNFWPVMGVDFQPQPLDLVALFG RDAPTVLEIGFGMGASLVTMAQQHPEKNFLGIEVHSPGVGACLAAAHEAGITNLRVMCHD AIEVLEEMIPENSLAMVQLFFPDPWHKARHHKRRIVQAPFAQQIKSKLKIGGVFHMATDW ENYAEHMLEVMNNAPGYKNLSSDNTYVPRPDSRPLTKFELRGQRLGHGNWDLMFERVE >gi|316918327|gb|ADCU01000016.1| GENE 71 84252 - 85316 1098 354 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 7 354 11 376 378 427 57 1e-118 MMLAQQFAQSVLTWYDRYGRKTLPWQSPKTPYQVWLSEVMLQQTQVATVIPYFLRFMEKF PDVRALAAAPQDEVLHLWTGLGYYARGRNLHKAAQTIMEKHGGEFPTSFDDVCALPGVGR STAGAILSLSLGQHYPILDGNVKRVLARCYAVEGWPGKKDVENRLWEISEQVTPANGVSQ FNQAMMDLGAMVCTRSKPKCELCPLSSGCIAYANSSWSQYPGKKPKQTIPEKTGYFLMMQ SGDNVWLEQRPNVGLWGGLYCFPQFINEDALREHVASLGIKQPKLHQLTSFRHTFSHFHL DIVPIWFDITQQSHCMDEGTGLWYNLAQPPSVGLAAPVERLLQQLSKEPVSQRS >gi|316918327|gb|ADCU01000016.1| GENE 72 85343 - 85615 329 90 aa, chain + ## HITS:1 COG:YPO0953 KEGG:ns NR:ns ## COG: YPO0953 COG2924 # Protein_GI_number: 16121256 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: Fe-S cluster protector protein # Organism: Yersinia pestis # 1 90 1 90 90 151 84.0 2e-37 MSRTIFCTFLNQEAEGQDFQLYPGELGKRIFNEISKEAWSQWMSKQTMLINEKKLSMMNP DDRKLLEQEMVKFLFEGHDVHIEGYTPPSQ >gi|316918327|gb|ADCU01000016.1| GENE 73 85687 - 86778 889 363 aa, chain + ## HITS:1 COG:YPO0954 KEGG:ns NR:ns ## COG: YPO0954 COG0741 # Protein_GI_number: 16121257 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Yersinia pestis # 1 361 1 361 362 590 81.0 1e-168 MAVKMKKVLALILIAPLLISCSGKKNTQDSEAYIKDTNGFDILMGQFAHNIENIWGINEV LIAGPKDYVKYTDQYLTRSHINFDSGQITIETISPTDPAASLKQAIISTLLMGDDPGSID LYSDVNDIQISKEPFLYGQVLDNTGQPIRWQGRASNFADYLVQHKLMKRTSGLHVIYSVT IQLVPNHLDKRAHKYLGMVRKASEKYGVDESLILAIMQTESSFNPYAVSGSDALGLMQVV QHTAGKDVFVQKGKWGTPSRSYLFDPENNIDTGTAYLAILQNNYLGGIQNPTSRRYAVIT AYNGGAGSVLRVFSSDRNRAVSIINQLTPGDVYETLTNKHPSGESRRYLYKVNNAQKSYR RGK >gi|316918327|gb|ADCU01000016.1| GENE 74 86833 - 87291 473 152 aa, chain - ## HITS:1 COG:BMEII0486 KEGG:ns NR:ns ## COG: BMEII0486 COG0864 # Protein_GI_number: 17988831 # Func_class: K Transcription # Function: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain # Organism: Brucella melitensis # 1 133 20 150 151 129 54.0 3e-30 MQRVTLSLDDDLMAEIDTIIKERNYQNRSEAIRDLARAGLQATAMPTLNDETSNCVAALF YVYDHEARELSKRLTKSFHDHHDLSLASLHVHLDHGSCLEVSLLKGASGKVKGLAEKVIA ERGVRYGKLVVVPGEDYEHQHEHAEGHNHHHD >gi|316918327|gb|ADCU01000016.1| GENE 75 87404 - 88072 408 222 aa, chain - ## HITS:1 COG:STM4267 KEGG:ns NR:ns ## COG: STM4267 COG0625 # Protein_GI_number: 16767517 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 220 1 219 222 236 57.0 2e-62 MITVHHLNNSRSHRVLWTLEELGLPYQIEQYQRDPVTMLAPESLKKIHPLGKAPVMTDGE WTIAESAAILEYLQDTYDHSALLKPQDKPERMQYRYWLHYAEGSLMPLLVMKLIFNRLGK APVPWIIRPIGSLLGKGVQRGYLDQQLATHLRFIENHLSKNNWFAGDHFSLADIQMSFPL EAMNIRTGLDKAPHARGLLKRLHARPAYLRALEKGGPLELMD >gi|316918327|gb|ADCU01000016.1| GENE 76 88226 - 89548 1452 440 aa, chain - ## HITS:1 COG:potE KEGG:ns NR:ns ## COG: potE COG0531 # Protein_GI_number: 16128668 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 439 1 438 439 677 86.0 0 MSTSKGNNKMGVVQLTILTAVNMMGSGIIMLPTKLAEVGTLSIVSWLVTALGSMALAYAF AKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELVGANL TPLGICIATIGVLWLATVANFGGARITGRISGVTVWGVIIPVVGISVIGWFWFSPTMYVQ SWNPHHLPVFEAVGSSIAMTLWAFLGLESACANTDVVDNPERNVPIAVLGGTLGAAVIYI VSTNVIAGIVPNMDLANSTAPFGLAFAQMFTPGVGKIIMALMIMSCVGSLLGWQFTIAQV FKSSADEGYFPKVFSKLTKADAPVKGMIVIVIIQTVLSLMTISPSLNKQFNVLVNLAVVT NIIPYILSMAALVIIQKVAKVNPSKARMANIIAFIGAMYSFYALYSSGEEAMMYGAIVTF LGWTLYGLISPRFEMQDKNV >gi|316918327|gb|ADCU01000016.1| GENE 77 89668 - 91830 2093 720 aa, chain - ## HITS:1 COG:STM0701 KEGG:ns NR:ns ## COG: STM0701 COG1982 # Protein_GI_number: 16764071 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Salmonella typhimurium LT2 # 1 719 1 718 732 1225 78.0 0 MEKLKIAVNNNTSECFSTERETVDINNTNFTDVSAAVISVEDAVSGMLDTIEQTGFGIPI FVAVCCEEELPAEVLPRVTGVFELCDGNVDFYGKQLEASATKYEKEVLPPFFGSLVEYVQ QGNAAFDCPGHQGGQFFRRHPAGRQFFDYFGETLFRSDLCNADVSMGDLLIHEGAPCTAQ MHAAKVFNADKTYFVLNGTSSSNKVVLNALLAPGDLVLFDRNNHKSNHHGALIQAGATPV YLETARNPFGFIGGIDSHCFEEKYLRDLVREVAPERSSEKRPFRLAVIQLGTYDGTIYNA RQVVDKIGHLCDYILFDSAWVGYEQFIPMMNDCSPLLLELNENDPGILVTQSVHKQQAGF SQTSQIHKKDKHIKGQDRYVNHKRMNNAFMMHASTSPFYPLFAALDVNAKMHEGESGKRM WMDCVKVGIETRKLLLKLCKHIRPFVPATIDGRKWEDFDTEEMANDLRFFDFIPGERWHS FEGYAEHQYFVDPCKLMLTTPGINVQTGEYDKFGVPATILANFLRENGIVPEKCDLNSIL FLMTPAEDMAKMQHLVAQIARFERLLEEDAPLADVLPSIYKNYEERYQGYTIRQLCQEMH DLYVSHNVKQLQKEMFRKAHFPKVVMNPQQANIEFVRGNVELVALSQVEGRIAAEGALPY PPGVLCVVPGEIWGGSVQRYFLALEEGINLLPGFAPELQGVYIQQDEDGRKRAYGYVIKQ >gi|316918327|gb|ADCU01000016.1| GENE 78 92156 - 92260 60 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENNNKAMPHIRRVTHLMMMAHRSCFDFHLFNSK >gi|316918327|gb|ADCU01000016.1| GENE 79 93267 - 94079 521 270 aa, chain - ## HITS:1 COG:NMB1357 KEGG:ns NR:ns ## COG: NMB1357 COG2990 # Protein_GI_number: 15677222 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 19 256 64 297 310 110 29.0 4e-24 MCRDYYSSQLLNHVTNTIAHPFIKRPVNKYLNRTWSGKQKLRTAMSTLDMIENSFSHQAL EKIYSPTNEGIVLADIELKSGDFAQLKLMRSKFTREGDLGLYLFNEQQQEVYGLTFSFGD KGELFVSGLQGPASENAAELVKSMTKLMHGMRPKNLLISALYAIAQSLGVSSIVGISNKA HIKSQRLKSSYDSFWLECGGEIDREGWFYLPKSEPERDIETVKSQHRSAFRKREALRGQT TDSVARCLASHAVGQSAVTVPPEAVFSEQS >gi|316918327|gb|ADCU01000016.1| GENE 80 94561 - 96960 1377 799 aa, chain - ## HITS:1 COG:YPO2291 KEGG:ns NR:ns ## COG: YPO2291 COG4458 # Protein_GI_number: 16122515 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria, putative virulence factor # Organism: Yersinia pestis # 4 797 9 841 846 674 46.0 0 MKSLNAKQINSQLQTIAHSVTQAIDWVDNAREHSPRLNIEADSLRVKLYRCHHQLTALQS SPQSPPSIGFWGLSQAGKSHLIHALVANENGRLEIHLAGRTLDFLTHINPGNLDCGIVTR FSRRRGIDNHDYPVELALLKEYEIAKMLVDAFINDFSSEFDYQELDEGVIDEHLAALSAL RQPDIVAGLSEYDVVALWDAVNRRIGSRGKRMNRDFWPSAVRLAPYLSVDHRARLFSLLW NGVDELTSAYASFSHILQRLSCAEKVAVPLSVLVDDMQLPAEGILSPEVLENANSPLDFS VQVCPLINRKTAKPVELSIAELALLTFEITLPLAGAAREPLFQQTDVLDFPGIGRSLERE YEPSSPLNGILQRAKTQGLLERYADNQQLGALMVCTAVGEKTTTQSVGKILAHWTKSTLG DTEQRKPTLIWALTPFDQRVTQNKSYDDAVQRYVGLPGESWGSMLVTDKSGVRRMVDYLA TEVNSETTLRRLNLRLESLRRELADHLLGNWLALDEEEEEKEKLRISQTLLKALQNRTGV HGELLERLLPTRDELRRLYLQLNNQANCAVVSGNHSDSVLPIMHGDPFGIEMNIDLVADF VPETDFVTSEAQTEANFANQAYQYWINHLRNLAENESLLALLGLGKSELELLSQELITAS VRMHIASTLSQALSGIENEGTRVDMLVDRQVSRVLSVLGDFVAWLGFQQIPESLRPDSRV NRGQKLFAKPPAMKTASWGDSLRLTKLSVMPSNNTGFYIYDWLVGLSEVIIQNKGYSSAH ELSQHQQQQIKNIVASIAD >gi|316918327|gb|ADCU01000016.1| GENE 81 96960 - 99917 1868 985 aa, chain - ## HITS:1 COG:YPO2290 KEGG:ns NR:ns ## COG: YPO2290 COG4457 # Protein_GI_number: 16122514 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria, putative virulence factor # Organism: Yersinia pestis # 1 984 1 1021 1023 1397 70.0 0 MLATISDYKHQVALIQNSGIQFLDFALKPNFSSELPGKFVRQTANGPLLRLLHNAETDTY WLPAPAGAQPERVKPESSIPLEHSLRLLNKIWLPLPFFRFNPPRTFLGGPDNWARMQILA LDEPDRDGNTYRLCMAFDTAVYADIHNAESLAPSENDVKTGAGFALAYRSEELGEFLDLT WVDGWLREVFIQQVTQQEDRHSVGIQTALREFEYQAHYLNLLHLLGHQLNVPTIKMNTNT LQEPTVHVDLIMDVGNSHTCGILVEDHLDEHNGLKQTYELQLRDMSQPHYVYNELFDSRV EFAQAEFGKRNFSVESGREQAFIWPSIVRVGREASRMALQRVGTEGSTGLSSPRRYLWDE EPYMHGWRFNSLEQTQQETLATALPLTFLLNDEGQPLYEQPLDERLPVFSAHYSRSSLMT FMLSELLAQALMQINSVAQRLKMTHSAAPRQLRSIILTLPSAMPKPEREIFRRRMVQAIG LVWKSMGWHPADDDFTHENDRVKSTVPVPDVQMEWDEATCGQMVYLYNETQVNFGGRTEE FFASQARADRELAEGETVGKTLHIASIDIGGGTTDLAITQYRLDDGAGSNVKITPRLLFR EGFKLAGDDILLDVIRLYVLPALQTACRKAGVIDADERMAKLFGGEGISVLRQQATLQLF SPIGRAILERYEGYDPLDSGAEIDTTFGELLSQQPTDTVLNYINNDVQRAQPTDAAPFDV LQVPLILKLSKLHAEFLSPRMRITQNLRSLCEVVALYSCDVLLLTGRPSRFPGIQALFRH LQPLPINRILPLEGYHTSEWYPFNKRGRIDNPKSTAAVGAMICLLAVNLRLASFNCKAGD FQPYSTVRYLGMLDNHQALMSNDVCYSDIDLDDPKFVLPSDNVFQMRGPLCLGFRQLDND RWPASPLYRLSITDQQLARKVAGESVLYVKLAVVAMNDEQGPECFALSDVKLDDGSSVPL HHLKLQLNTLSDSAHYWIDSGSVFS >gi|316918327|gb|ADCU01000016.1| GENE 82 99936 - 101261 495 441 aa, chain - ## HITS:1 COG:no KEGG:Dd586_2050 NR:ns ## KEGG: Dd586_2050 # Name: not_defined # Def: putative virulence effector protein # Organism: D.dadantii_Ech586 # Pathway: not_defined # 1 438 1 438 438 379 50.0 1e-103 MAKQLLRSGSLDDFLALGENGQPVYASALQLRETLRLRHQQTIADSLAIPQPNERGDRID WYAPIAGKVTSWIAASDGERASALRQLEHCQQTANALSLKAQNSDKPALRLFGILLAKAM QFPGSNHVFLVDGKPVLTFWGFVNLDKKSRTDAFDCLRAASADTVPEKLAITELPTKPPI TVPSVALANTASQQTSTVDDSLDMSPTSIDAQTTRPRRDWRQLWWLPLALIALGILFVQI RAKGDVAAAKPSEPEVKTAVVATKPALTTKTLVTTTHLPVAHVTSPEPAPAAPIEKKPEI KVEETPVTAAAPNALVMPAEAVKMGSTRFMNGKWRASLDIKTPRTGKPPSLVYQIKNSKG TVKITHGDGISCSANVTTGLMSSGSLVVDSRIKAKCSDGSRYKIPQLICKAGENDVAECK GRYDADTLLPMNMTRIGKSSQ >gi|316918327|gb|ADCU01000016.1| GENE 83 102081 - 102713 568 210 aa, chain + ## HITS:1 COG:STM0306 KEGG:ns NR:ns ## COG: STM0306 COG3637 # Protein_GI_number: 16763689 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Salmonella typhimurium LT2 # 10 210 9 239 239 113 35.0 3e-25 MKKLTSLAVIIGLATSASAFAANSDNTGYYAGAKLGTSLEQIHGQKSATGSSVPRDTKQA GTAGLVFGYNFQNEFNLPIRAELDYSFRDTTDTDHFIKADNTRTHNRVRLQTAMLNGYYD INTDTAFTPYISAGIGYANVNLKNTQGGASHSGNGDNFAWSVGTGVSYAINNHLDLDLGY KYLDAGDATAQASKVKVATHDFTAGVNYYF >gi|316918327|gb|ADCU01000016.1| GENE 84 102911 - 103837 624 308 aa, chain + ## HITS:1 COG:YPO0949 KEGG:ns NR:ns ## COG: YPO0949 COG2066 # Protein_GI_number: 16121252 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Yersinia pestis # 1 308 1 308 308 513 81.0 1e-145 MATKLSNQLLEDILAQVRPLIGQGKVADYIPALAEVPADKLGIAVCTVDGETYQAGDANE RFSIQSISKVLSLTVALSRYAESDIWARVGKEPSGQPFNSLLQLELEQGKPRNPFINAGA LVVCDMLQSRLSAPKQRMLEVVRALSGEPDIVYDARVARSEFEHSDRNAAIAYLMKSFGN FDNDVITVLQTYFHYCALRMSCMELARTFVYLANNGHSPALEEPLINERQNRQINAMMVT SGMYDGAGEFAYRVGMPGKSGVGGGIIAVVPHEMSIAVWCPELDASGNSLAGTAALEILA QRIGRSIF >gi|316918327|gb|ADCU01000016.1| GENE 85 103852 - 104580 875 242 aa, chain + ## HITS:1 COG:no KEGG:YE3439 NR:ns ## KEGG: YE3439 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 2 239 8 245 246 288 65.0 9e-77 MIRKLGLSLLMLTAWQAQAAWECNVKPQDDIIVNPQQVQIVGASGNLTIDKNGNMTRDGK AVTLSTKAQQQAVNLQSGIRKDFPWIDEGAQTRLEKARVSLDKVIVEQVGSDSNIRNRLT KLDSQLKEQMQRILEKRSDGYTFHHQAISKVEQEGQNLVNQTMGGVLQDSINEMGLKQAA NATKSDNPLQAIMGNLGGLQQAIRSEWSKQEDDFKSFGKDVCSRITTLDSQRQALLKELP KA >gi|316918327|gb|ADCU01000016.1| GENE 86 104622 - 105752 714 376 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_1167 NR:ns ## KEGG: EcE24377A_1167 # Name: mdoC # Def: glucans biosynthesis protein # Organism: E.coli_E24377A # Pathway: not_defined # 6 367 7 373 385 297 48.0 6e-79 MAKTIQREHYLDYIRATLMLLGIPFHVSLVYSAHHWVVNSTPESLPLSLFNDFIHAFRMQ VFFVISGYFSCMLYQRYPLKKWLNVRLTRLLIPMATAMVLITLPQFWFILHHTTGISDWA QADLWQKANICVWYLVSHLWFLLTLSLLTVISAPLLNAIVNRALWSKVSTGALLPIFIAL GVGFALLHKLSATLMPTVTGSALFNFLVVNTLMYFPFYLLGAVAFVHIKHKENITRVSFI DGLIAAASVGLYLLNENTQVFAPLQLSVQFCLIFIIGLTMTKVVLTLGHRLLNRESRGVT YFVGASLFIYLVHHPLTIIYGSLMENVHPQPLLGFAVGVTLVVLGSLMLYEIHRRVPLLR YLFSGKPQKPVVNSVK >gi|316918327|gb|ADCU01000016.1| GENE 87 105894 - 106694 807 266 aa, chain - ## HITS:1 COG:STM4025 KEGG:ns NR:ns ## COG: STM4025 COG1349 # Protein_GI_number: 16767290 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 260 1 260 267 402 80.0 1e-112 MSLTELTGNPRHDQLIQLIAQRGYMNIDELAQLLDVSTQTVRRDIRKLSDQGLISRHHGG AGRASSVVNTAFEQREISYTNEKMAIAEAIADYIPDRSTVFITIGTTVEHIARALMNHSH LRIITNSLRVAHILYKNTEFEVMVPGGTLRPHNGGIIGPSAVSFVEGFRADYLITSMGAI EADGSLLDFDVNETTVVKAMMAHSRHILLAADHTKFHASAAVEIGNVGKATALFTDDEPP AALSALLQQQQVELVVTSSAQQEPTL >gi|316918327|gb|ADCU01000016.1| GENE 88 106732 - 107628 559 298 aa, chain - ## HITS:1 COG:yihV KEGG:ns NR:ns ## COG: yihV COG0524 # Protein_GI_number: 16131723 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 1 298 3 300 300 410 71.0 1e-114 MTRIACVGIAVLDRLYYVDKLPTGGGKYVAHDYREIGGGPAATAAVAAARLGANVDFIGR VGDDATGDTLLNELESYGVNTAFTQRYSQARSSQSAILVDAYGERIIINHPSPDLPNDAQ WLTAIDFSQYDMVLADVRWHQGTLTAFTLAKQAGVATLLDADVTPQDIRPLVALADHAAF SEPGLQRMTGENDIQRALQMAENDTNAQVYVTQGKKGCFWLQHGQLQHQAGFHVEVVDTT GAGDVFHGALAVALGRQPDIAASVRYANAVAALKCTQPGGRAGIPDCDQTDSFLTRFV >gi|316918327|gb|ADCU01000016.1| GENE 89 107919 - 108803 754 294 aa, chain + ## HITS:1 COG:STM4023 KEGG:ns NR:ns ## COG: STM4023 COG2084 # Protein_GI_number: 16767288 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 292 1 292 298 447 80.0 1e-125 MAKIAFIGLGQMGLPMANNLLKQGHQLSVFDISTQAMAQLVGKGAQACHSPADAAQNVEF VITMLPNGDLVREVLFGAEGICTTLLPSALVIDMSTIHPLQTDKLIAEMKDRGFSMMDAP VGRTSDHAIAGTLLILAGGTSEQVEYATPVLMGMGSELINAGGPGMGIRVKLINNYMSIA LNALSAEAAVLCEALGLSFDVALKVMSGTPAGKGHFTTSWPNKVLKGDLTPAFMIDLAHK DLGIALDVANQLHVSMPMGAASREVYSQARASGRGRQDWTAILEQVRAASGLKK >gi|316918327|gb|ADCU01000016.1| GENE 90 108866 - 109729 891 287 aa, chain + ## HITS:1 COG:BH3786 KEGG:ns NR:ns ## COG: BH3786 COG0191 # Protein_GI_number: 15616348 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Bacillus halodurans # 1 284 1 287 287 236 44.0 4e-62 MPYVSGKTMIQQAWKHGYAIGAFSAHNAETVRAILLAAQEEQSPVMIQVGQKVISVMGLK PMKEIIDAFMHDITVPVCIHLDHSRSFEQTMQAIQCGFQSVMFDGSHLSFEENVRITRAA SEVAHALNIGMEGEIGKIGGTEDDISVDEKDALITSCDEALRFSEGTDVDYLAVSIGTAH GVYKQEPKLAFGRLQEIREIVKKPIVLHGGSGVPDDQIRQAIALGVAKVNVDTELRQAFT QGLCEVLTNDPEEYALAVSLGHGRDVMKEKVIEKIRLFGSNGKALQF >gi|316918327|gb|ADCU01000016.1| GENE 91 109753 - 110796 890 347 aa, chain + ## HITS:1 COG:TM0282 KEGG:ns NR:ns ## COG: TM0282 COG2017 # Protein_GI_number: 15643051 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Thermotoga maritima # 1 345 5 354 356 276 45.0 5e-74 MTTIQRQHFGEHLGQTVSLFTLSNSQGMRLCVTDYGCIVTQLWAPNRDGKSEDVVMGFDD LASYQAGHPFFGAIAGRCANRIAGGRFNIDGQEYLLATNEAPTGQHLHGGIRGFDKYVWQ AQEDGDGVIFSRTSVDGEEGYPGNLTVCHRIDLTDDNVVTFEFEAQTDKPTLVNLVNHSH YNLRGHTHLIHDQQLKIDADFMTPVDESTMLPTGEIVRVAGTAFDFRNARRLGDAMQQRA AQDFDMNYVLKPTDTDLHPAATMICPHSGRVMEVHTTLPGVQFYNAFKLSNKVWNGKEGH RYQAFSGICLETQAFPDSIHFPHFSNVVLRPGQTYASRTEHRFRVIA >gi|316918327|gb|ADCU01000016.1| GENE 92 110823 - 112169 1347 448 aa, chain + ## HITS:1 COG:TM0951 KEGG:ns NR:ns ## COG: TM0951 COG2407 # Protein_GI_number: 15643713 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Thermotoga maritima # 61 423 68 443 471 94 22.0 4e-19 MSNKAKVGVLALGRNTFDVPYAQEMLQQAWHSLALMDLELVGEPELQFDAESALKALPAL KQADLDLLLILQVTFTDASLTTEVIRDFPVPTAMWSFPEARTGGRLRLNSFCGVNLACHA LSREGIKVQTIHGAPDDASAINELQQLAQAAAIVRRFKQTKVMVIGEHPLGFDACNYNQQ QLEQHFGVQVARQPVLSFIDEVKALPDSVADAPYARRAKDFPNLGEMDQDATRKTLKVYS ALQAKALREGYSGIAVRCWPDFFTDYGCAACGALALMNEDKVPCGCEADMFGVLSSLMAQ WASGNAAFNTDLVDIDPQNNSVVFWHCGQAPIEMADRDGPVQATIHSNRKLPLLSEFALK PGRITLCRITQGEGKLRLMLAGGEMIKAPLAFSGTAGTARLDVDADVYRKRLIDAGMEHH TSLVYGEHRPLLRKVAQLLNLEVVELSE >gi|316918327|gb|ADCU01000016.1| GENE 93 112264 - 114294 1617 676 aa, chain + ## HITS:1 COG:yihQ KEGG:ns NR:ns ## COG: yihQ COG1501 # Protein_GI_number: 16131718 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Escherichia coli K12 # 8 676 11 678 678 1109 76.0 0 MVSQQSGLELQQQHDGFTLIFQNRVLLKHSSESPCLWIGHGKADIDMFRGNFSIKDRLGE KLALIDAEISSTAAGFDIRFSRGDVAQATLNVAIDAHDRLEMKLSNADSENNRMWLRLAA EPQDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQSYVTWQADCKENAGGDYYWTFFP QPTFVSSQKYFCHFDNSCYMNFDFSAPEYHELAIWQDEAVLHFDCADSYITLLEKLTALL GRQPELPDWVYDGVILGIQGGTEVCQKKLDVMREHGVKVSGIWAQDWEGRRVTSFGKRLM WNWRWDSELYPELDKRIPQWKKEGVRFLGYINPYVAIEKELYAEAAEKGYLTKDYNGEDY QVEFGEFYAGVVDLTKPEAYDWYKNVIKKNLIEFGLDGWMADFGEYLPTDTVLHNGVDAE IMHNAWPALWAKCNYDALVETGKLGEILFFMRAGYTGSQKYSVMMWAGDQNVDWSLDDGL ASVIPAALSLAMTGHGLHHSDIGGYTTLFDMKRNKELLMRWCEFCAFTPLMRTHEGNRPD DNWQFDHDIETISQFARMSHIFVALKPYIKQAVKFNSQSGLPVMRPLFLHYEDDAHTYSL KYQYLFGRDLLVAPVYEEGRTDWSLYLPQDNWINLWTGEPHAGGCEVTVAAPMGQPPVFY RADSEWAELFASLKTL >gi|316918327|gb|ADCU01000016.1| GENE 94 114352 - 115794 1142 480 aa, chain + ## HITS:1 COG:yihP KEGG:ns NR:ns ## COG: yihP COG2211 # Protein_GI_number: 16131717 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli K12 # 6 474 5 466 468 770 84.0 0 MVYTWRTTMTQVLNNNNEPAKLLLPLREKIAYGMGDLGSNILLDIGTLYLLKFYTDVLGI PGTYGGIIFLIAKFFTAFTDMGTGIMLDSRTKIGPKGKFRPFVLYAAFPVTLLAIANFIG TGFEITGKTVVATALFMLYGLFFSMMNCSYGAMVPAITKNPNERASLAAWRQGGATLGLL LCTVGFVPVMDLVEGNSQLGYIVAATLFSLVGLFFMWCCYAGVKERYVEAPAAHNAQGSA QKKPGILQSFRAIAGNRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSYMGFF SMGCIFIGVFLMPMAVRKFGKKTVYLGGLAIWIVGDVLNYMYGDTSVTFVLYSCLAFFGS AFVNSLNWALVSDTVEYGEWRTGIRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQIGYVP NIAQAAHTIEGLRELIFIYPAALALTTIVAMGCFYNLNETMYVKIVGEIEARKRDTSPVI >gi|316918327|gb|ADCU01000016.1| GENE 95 115886 - 117277 557 463 aa, chain + ## HITS:1 COG:STM4017 KEGG:ns NR:ns ## COG: STM4017 COG2211 # Protein_GI_number: 16767282 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Salmonella typhimurium LT2 # 4 460 1 453 473 716 78.0 0 MENLEHQDPVTLKLSLREKIAYGMGDFGSNLLLCIGTLYLLKFYTDILGIPAIYGGVIFL IAKFFTAFTDILTGVLVDSRRNIGVKGKFKPFIFYASLPVALLEVANFIHVDVSINLKTV LATVLFMLFGLFYSLMNCSYGAMVPAITKNPHERASLAAWRQGGSTLGLLLCTVGFMPIQ TLFLSQPELGYLVGASVFATCGLLCMWWCHSGVKERYVELVPLHHKPSIFKSFCAIFKNP PLLVLCIANLCTLAAFNIKLAIQVYYTQYVLQDINLLAYMGFFSMGCILIGVLLVPTAVK RFGKKQVYLGGLMLWALGDLLNYFYGSSWGNSSVVFVVFSCMAFFGTAFVNSLNWALVPD TVDYGEWKTGIRAEGSVYTGYTFSRKISAALAGFLPGIMLTQIGYIPNVIQTESVLEGLR RLIFIYPCVLAIIAAITMGLFYKLSEKRFVQIINELNARKLAK >gi|316918327|gb|ADCU01000016.1| GENE 96 117391 - 118080 468 229 aa, chain + ## HITS:1 COG:no KEGG:ECL_05109 NR:ns ## KEGG: ECL_05109 # Name: not_defined # Def: putative porin # Organism: E.cloacae # Pathway: not_defined # 1 229 1 228 228 322 74.0 9e-87 MNKISTAIILASFISGTAYAGAYLETREAYNTASEESEIILRGGYNFDNGSGLMYTNAYN VGKMDQLKHSYNELEGWYPLFRPTENWTISPGVLINSSSAGSGGAAYLDVNYKFLPWFNL TTRYRYNHNNYDTIDTNGEYDKNDTHEMAMYWNFKVSDQFLYTFEPHYFIRVNDFKSKND ESHHWEITNKFSYKIDDNWMPYLELQWLDRWDYYNREQYRIRLGLRYSF >gi|316918327|gb|ADCU01000016.1| GENE 97 118115 - 118834 689 239 aa, chain - ## HITS:1 COG:ECs3665 KEGG:ns NR:ns ## COG: ECs3665 COG1349 # Protein_GI_number: 15832919 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 232 1 232 243 324 70.0 1e-88 MKTDRHQAIVQLIRQHETLTTEDLADLLHVSKETIRRDLNALQAQGKIIRQHGRAKSIKR DTQDSGDPFSARLKSHFTSKADIARQTLPWIDEGMTIALDASSTCWYLAKQLPDIDITVF TNSVRICQELSKREHIQLISSGGLLQRKYACYVNPAIISQLKELEIDLFIFSCEGIDKEG ILWDSNSYNAEFKSLLLKRALQSLLLIDKSKMNRTSEIKIGSINDVEQVISNLEIGEGE >gi|316918327|gb|ADCU01000016.1| GENE 98 118917 - 119342 327 141 aa, chain - ## HITS:1 COG:ECs3664 KEGG:ns NR:ns ## COG: ECs3664 COG4154 # Protein_GI_number: 15832918 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose dissimilation pathway protein FucU # Organism: Escherichia coli O157:H7 # 1 141 1 140 140 219 83.0 2e-57 MLKNISPLISPQLLKTLAEMGHGDEIIFSDAHFPAHSMGPKVIRADGLKVSDLLAAIIPL FELDSYAPPLVMMAAVAGDTLDPSVEQRYLQALTHHEQSELTIERIDRFAFYERAQKAFA IVITGETAKYGNILLKKGVTP >gi|316918327|gb|ADCU01000016.1| GENE 99 119344 - 120807 1120 487 aa, chain - ## HITS:1 COG:fucK KEGG:ns NR:ns ## COG: fucK COG1070 # Protein_GI_number: 16130710 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 469 11 475 482 631 65.0 0 MNNDVVIILDCGATNVRAIAVDAQGIVVAKATTPNASQPATENDQWHVWSLDDILQRFAD CCQRIMPKLGGAKIHAISVTTFGVDGALVDANGELLYPVISWKCPRTAAIMEKIDRYITP GELQTISGIGQFSFNTLYKLIWLKENRPELLEKAHAWLFISSLINQRLTGEFTTDRTMAG TSQLLDVRQETFSDTILQRTGLPIGLFPRIVAAGEHIGHLLPHMAERLGIPAGTPVIATG HDTQFALFGSGAGLDQPVLSSGTWEILMVRTPQVNTSLLPRFIGSTCELDSCEGLFNPGL QWLASGVLEKVRQLYWPNGKLPDVYSQMIAEAANISPGSEGLRMNCQLLDNRSPAGWSGM RLHTERGHFYRSALEGLSWQLQQNLALLENIGGFTSKELLLVGGGSRNTLWNQIKADVLN LPIKVLHDAETTVLGAAMFAWSGVGYYDSPEQARQQVNYRYQSYYPSEQSAEYRELTTSH NPILEGV >gi|316918327|gb|ADCU01000016.1| GENE 100 121025 - 122815 1789 596 aa, chain - ## HITS:1 COG:fucI KEGG:ns NR:ns ## COG: fucI COG2407 # Protein_GI_number: 16130709 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Escherichia coli K12 # 10 596 5 591 591 1095 88.0 0 MNSQHLPIKNLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAQLLSENLRHACGATVEC VIADGCIAGMAESAACEDKFSSQNVGLTITVTPCWCYGSETIDMDPMRPKAIWGFNGTER PGAVYLAAALAAHSQKGIPAFSIYGHDVQDSGDDSIPADVKEKLLRFARAGLAVAGIKGK SYMSLGGVSMGIAGSIVDHNFFESWLGMKVQSVDMTELRRRIDQKIYDEEELELALAWAD ENFRFGPDLNAEQYRRSPESSRAVLRESLLMAMCIRDMMQGNAKLAEQGFVEESLGYNAI AAGFQGQRHWTDQYPNGDTAEALLNSSFDWNGVRKPFVVATENDSLNGVAMLLGHMLTGT AQVFADVRTYWSPEAVKRVTGSELTGHAQHGIIHLINSGSAALDGSCRQLDAQGKPTMKP HWEISQKEADACLQATEWCPAIHEYFRGGGYSSRFLTRGGVAFTMSRVNIIKGIGPVLQI AEGWSVELPQDVHDILDKRTNETWPTTWFAPRLTGKGPFTDVYSVMANWGANHGVLTIGH VGADLITLASMLRIPVCMHNVADGDIYRPSSWGAHGMDIEGQDYRACQNYGPLYKK >gi|316918327|gb|ADCU01000016.1| GENE 101 122866 - 124185 878 439 aa, chain - ## HITS:1 COG:fucP KEGG:ns NR:ns ## COG: fucP COG0738 # Protein_GI_number: 16130708 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Escherichia coli K12 # 1 431 1 433 438 684 83.0 0 MGNVSIQSENYRVASHERKGNYLIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQ AGLIQSAFYFGYFLIPIPAGILMKKLSYKAGIITGLLFYAIGAALFWPAAEGMNYTLFLI GLFIIAAGLGCLETAANPFVTVLGPEETGHFRINLAQTFNSFGAIIAVVFGQGLILSHVP HQSADVLAQMSPEQLAAYNHSLVLAVQSPYMMIVAIVLFVALLIAFTKFPVIQSDAHSGD KGGSLLKSVARLLRIRHWRWAVLAQFCYVGAQTACWSYLIRYAIEELPGTTPGFAANYLT ATMVCFFIGRFSGTWLIRHYAPHKVLAVYAFISMVLCVISAAAGGHVGLIALTLCSMFMS IQYPTIFSLGIKGLDQDTKYGSSIIVMTIIGGGIVTPLMGFVSDAAGNIPTAELIPALCF AIIFIFAKFRSNVLPRVTA >gi|316918327|gb|ADCU01000016.1| GENE 102 124793 - 125440 539 215 aa, chain + ## HITS:1 COG:ECs3660 KEGG:ns NR:ns ## COG: ECs3660 COG0235 # Protein_GI_number: 15832914 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 385 86.0 1e-107 MERDSLAREIIHTCLEMTRLGLNQGTAGNVSVRYHDGMLITPTGIPYENLTESHIVYIDA DGKPEEGKVPSSEWRFHQIAYQTRPEANAVVHNHAVHCTAVSILNRPIPAIHYMIAAAGG STIPCAPYATFGTKKLSEHVAVALKNRKATLLQHHGMIACEVNLQKALWLAHEVEVLAEL YLSTLPIVDPVPVLSDEEIAIVLEKFKTYGLRVEE >gi|316918327|gb|ADCU01000016.1| GENE 103 125479 - 126627 1131 382 aa, chain + ## HITS:1 COG:ECs3659 KEGG:ns NR:ns ## COG: ECs3659 COG1454 # Protein_GI_number: 15832913 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 381 2 382 383 587 79.0 1e-167 MTNRMILNETSWFGRGAVNELVPEVLRRGYGKALIVTDAQLVSCGIVEKVTSKLDAAELE YQIFDEVMPNPTIAVVQRGLAAFDASGADYLIAIGGGSPQDTCKAIGIISANPEFEDVRS LEGVSPTHSPSVPILAIPTTAGTAAEVTINYVITDEENRRKFVCVDPHDIPLVAFIDADM MDGMPASLKAATGVDALTHAIEGYITRGAWELTDTLHLKAIEIIARSLRNSVAGQPEAVE DMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNAAYTGEKYR QIAQAMGADVTHATLEQAREAAIQAVEALNRDVGIPASLKEVGAREEDISDLAQAAFDDV CTGGNPREAKLEEIKALYRQAM >gi|316918327|gb|ADCU01000016.1| GENE 104 126806 - 127378 611 190 aa, chain - ## HITS:1 COG:YPO0590 KEGG:ns NR:ns ## COG: YPO0590 COG3247 # Protein_GI_number: 16120919 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 188 1 188 189 201 65.0 7e-52 MLNIDRKSLLGLDGNFLKKQRTLLLVISFLLLLGGIFCLINPFASGAALSAIVGTLFVLS GIGLIIGMIANRTRNFWPMVAGILMGAAYIIMGYVFITNPAVGIFTMSVILATLFAVGGI IRLTAGFKLRGVNGAWLQIVIGILDLIIAAMFITAGPVMSVTLVTTIVGIEMLFSSFSCF QIAGLFKRQA >gi|316918327|gb|ADCU01000016.1| GENE 105 127600 - 128826 1285 408 aa, chain - ## HITS:1 COG:ECs4432 KEGG:ns NR:ns ## COG: ECs4432 COG0477 # Protein_GI_number: 15833686 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 8 402 5 399 400 528 74.0 1e-150 MNMTGMQNYNRTRWLTLVGTIITQFALGSVYTWSLFNGPLSEKLDEPISRVAFSFGLLSL ALALASSVAGKLQDRFGVRKVTIAAGAVLALGFVLTSHANNLVMLYLSAGVLVGLADGAG YLMTLSNCVKWFPERKGMISACAIGAYGLGSLGFKYIDTHLLATYGLEQTFIIWGGLAMV MVMAGAMLMKDAPKQENSTQNTQGISTAQDYTLAEAVRQPQYWMLALMFLTACMSGLYVI GVAKDIGEGMVHLPAITAASAVTVIAIANLTGRLVLGILSDKMARIRVISLAQVISLIGM GTLLFIPLNESLFFASVACIAFSFGGTITVYPSLVSDFFGLNNLTKNYGLLYLGFGIGSI IGSIIASMFGGFIVTFSVIMTLLVISLVLSATIRMPGQREAHNRLAHI >gi|316918327|gb|ADCU01000016.1| GENE 106 129043 - 129342 337 99 aa, chain - ## HITS:1 COG:no KEGG:Spro_2188 NR:ns ## KEGG: Spro_2188 # Name: not_defined # Def: cupin 2 domain-containing protein # Organism: S.proteamaculans # Pathway: not_defined # 1 96 1 96 101 99 52.0 3e-20 METFKAQTPIEEFAVGVTRRNGILGNGKPATEMTFESGAFSQLRKQPQAITTRIVTGEFE FTVGTDTHLLVSGESLNIPIGTISGCFCLSSGVLVETPL >gi|316918327|gb|ADCU01000016.1| GENE 107 129696 - 130613 476 305 aa, chain + ## HITS:1 COG:yneE KEGG:ns NR:ns ## COG: yneE COG3781 # Protein_GI_number: 16129479 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 305 18 321 321 354 60.0 1e-97 MIVRPQQHWFRRLFVWHGSVLPKILFRLSLNFVFACIAVVCYLWHESLDINLTLAPFSLL GVAIAIFLGFRNNASYARFTEARLLWGNLLITERSLLREVKSLMPDPAEQARYFTALLIA FTYCLKHQLRKTDMHGDLDRLLPASERNSVLNSHSPCNTLLLKMGMWLGEQRRLGRISDI NFHSIDNNLNHLSSILGGCERISNTPIPFAYSLIVHRTVYLFCALLPFALVSDLHYLTPL VSVFISYTFISLDSLAEELEDPFGLAPNDLPLNAISATIEINLREMIEDDEKPTPMKPDH HCLLS >gi|316918327|gb|ADCU01000016.1| GENE 108 130678 - 131148 519 156 aa, chain - ## HITS:1 COG:no KEGG:ROD_05131 NR:ns ## KEGG: ROD_05131 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 151 1 151 156 213 64.0 2e-54 MTEIERILKEEIEKVNKAERRDNRPRFSISFIKKHPGLFVGMYLAYAATLAVMLQSETLA DVTWVMTLLFLGLNLFFFFDVNPRYHYEDIDVLDLRVCFNGEWYNTRMVPDALVDSILQS PQVDDSRKQKLRAIMQKKSELSFYDIFAVGQNRSPV >gi|316918327|gb|ADCU01000016.1| GENE 109 131218 - 131400 232 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAIAQSQEKIMSISEAKTVANPLWKRLLWLVAIWGGSVLALGCVSMLFRLLMTAAGLKSH >gi|316918327|gb|ADCU01000016.1| GENE 110 131400 - 132407 1035 335 aa, chain - ## HITS:1 COG:PA3929 KEGG:ns NR:ns ## COG: PA3929 COG1294 # Protein_GI_number: 15599124 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Pseudomonas aeruginosa # 1 335 1 335 335 426 66.0 1e-119 MGIDLPLIWFAIIIFATLMYIVMDGFDLGIGMLLPVTRDMQERDMMVNTVAPVWDGNETW LVLGGAALFGAFPLAYAVIVDALSIPLTLMLIALIFRGVAFEFRFKALPAHRNFWDKAFI IGSGCATFMQGIVVGAVINGFPVMERTFVGGAFDWLTPFNLFCGVGLMLAYALLGSTWLI MKTSHQLQHKMYRITRPLLLALLTVIGIISLWTPLAHSAISERWFSMPNILFLLPVPILT LVCAGVIWRGTHNNSHYLPFIMTLLLVFLGFSGLGISIWPQIIPPSINIWQAAAPPQSLG FMLVGALFIIPIILVYTFWSYYVFRGKISADEGYH >gi|316918327|gb|ADCU01000016.1| GENE 111 132407 - 133813 1130 468 aa, chain - ## HITS:1 COG:STM0360 KEGG:ns NR:ns ## COG: STM0360 COG1271 # Protein_GI_number: 16763740 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Salmonella typhimurium LT2 # 4 451 3 450 467 714 79.0 0 MFGLDAFHLARIQFAFTVSFHIIFPAITIGLASFLAVLEGLWLKTRHPDYRTLYHFWAKV FAVNFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGW NKVGKELHFFATCMVALGTLMSTFWILASNSWMHTPQGYEIVNNQVVPVDWLAVIFNPSF PYRLLHMTTAAFLSSAFFVGASAAWHLLRGNDTPATRKMLSMALWMALIVAPLQAFIGDM HGLNTLKYQPAKIAAIEGHWDNKPGEATPLILFGLPDMEREETRFKLEVPYLGSLILTHS LDKQVPALTEFAKEDRPNSPLVFWSFRIMAGLGMLMILLGAIGLWLRYKQRLYTSRPFLH FVFWMGPSGLIAILAGWITTEVGRQPWIVHGLMRTKDAVSAHGDLHMSISLLTFFVVYGA VFGVGYAYMMRLIRKGPEPSHSSSDDNGAFPTAAGRIAATPSHQQETH >gi|316918327|gb|ADCU01000016.1| GENE 112 134075 - 135484 1029 469 aa, chain + ## HITS:1 COG:ydcR KEGG:ns NR:ns ## COG: ydcR COG1167 # Protein_GI_number: 16129398 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli K12 # 1 469 1 468 468 598 63.0 1e-171 MAKYEDLVKRIRGQITAEIWQVGDKLPSLREQVVHSGLSLMTVMHAYQILESQGWIVSRP QSGYYVAPQAKFLTPSPSHEPLQRAEAVDINAFIFDVLQASRDSAIVPFGSAYPDPTLFP RQQISKSLTTVARAMTTLSATDNLPPGNEDLRKILAKRYAMQGIRIDPEEIVITAGALES LNLSLQAVTQPGDWVIVENPCFYGALQALERLRLKALSIAAHPEFGIDLAALEQALKTYQ VRACWLMTNIQNPLGCTLSVEKKQKLVALLQKYDVYLIEDDVYGELYAGGEKPLPAKAFD DSGMTMHCSSFSKSLVAGFRVGWVAAGRMARKIQQLQLMSTLSTSAPMQLALANYLATRS YDSHLRRLRRMMEQRKYAAWQSLRAHLPAGVNINYSHGGYFLWIELPANVNATELYHRAL QEKISIAPGQMFSASNQYTNYFRFNVSHEWTDKSEKAVQRLSAIVREMM >gi|316918327|gb|ADCU01000016.1| GENE 113 135941 - 137440 1047 499 aa, chain + ## HITS:1 COG:STM3589 KEGG:ns NR:ns ## COG: STM3589 COG0306 # Protein_GI_number: 16766875 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Salmonella typhimurium LT2 # 1 497 1 496 498 779 85.0 0 MLNLFTGLDLYTGLVLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRPQLAVVMAAVF NFFGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASS SHTLIGAIIGIGLTNALMTGTSVIDALNIPKVIDIFASLIVSPIVGLVCAGGLIFLLRRY WSGTKKRDRIHRVPAERKKKGGKKKPPFWTRIALILSAAGVAFSHGANDGQKGIGLIMLV LVGIAPAGFVVNMNASGYEITRTRDAIGNLEVYFQQHQDQLKLVTDMEQPLPSATPVGTQ PTEFHCHPANTVDALNRVKMMLSGNMDNYSKLSIAQRSQLRRIMLCISDTADKVAKLPNM SRDDQQLLKKLRTDILNTIEYAPIWIIMAVALALGMGTMIGWKRVATTIGEKIGKKGMTY AQGMSAQITAAVSIGLASYAGMPVSTTHVLSSAVAGTMIVDGGGLQRKTVTSILMAWVFT LPAAILLSGALFWVALQFT >gi|316918327|gb|ADCU01000016.1| GENE 114 137570 - 138277 561 235 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_3470 NR:ns ## KEGG: ECUMN_3470 # Name: yghT # Def: conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain # Organism: E.coli_UMN026 # Pathway: not_defined # 1 229 1 229 230 376 79.0 1e-103 MQPINIPIIAVIGSDGSGKSTVCEHLINCVQKYGPAVRIHLGKQAGNVERAVVKLPLMGK ALNKTIKHNKVKSAKKLPGPVPALVIMSFVFRRLLRFRRMLACHRRGLIVLADRYPQIQI PGAYDGTVFPANVTGSRFVLWLAGLERSSFSWMANHKPDLVIKLNVDLDVACARKPDHRR EALAKKIAITPQLTFDGSQLVDIDANKPLDEVLIDAEKAITSFMEARGYRCIENS >gi|316918327|gb|ADCU01000016.1| GENE 115 138451 - 139164 259 237 aa, chain + ## HITS:1 COG:no KEGG:G2583_3711 NR:ns ## KEGG: G2583_3711 # Name: yghS # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 236 1 236 237 375 76.0 1e-103 MSQQNTPIINHTFVRVIAIVGCDGSGKSTLAANLVNNLASQIPTELFYLGQSSGRIGEWI GRLPIIGISFSRYLRAKADCVHERPSAPPGNATTLVIYLLSYWRAYKFRKMLARSQQGHL LITDRYPQVEVPGFRFDGPQLAKTAGGNWWVRTLRKRELKLYHWMASFQPLLLIRLDIDE QTAFSRKPDHKLAVLHEKVVVTPHLTFNGAKILELDGREPADTILNKSLSTIRASLL >gi|316918327|gb|ADCU01000016.1| GENE 116 139207 - 139950 476 247 aa, chain + ## HITS:1 COG:no KEGG:B21_02809 NR:ns ## KEGG: B21_02809 # Name: yghR # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 11 246 17 252 252 366 76.0 1e-100 MHTDKLNEALPEYIPGLIAVVGCDGTGKSTLTADLVKQLKKHWVTERRYLGLVSGEDGDK IKRLPLVGVWLERRLATKSSKTQSMSTKSPALWAALIMFGFSLRRRANLRKAICLAQSGV LVISDRYPQADVSGFHYDGPGIGVERVEEGVKRHLAERERLLYQQMALLRPELIIRLDID IDTAFSRKPDHDYEELRDKIAIMTKIGYNGSRVLELDSRAPYCEVLDKALEAVSSIAVVS QRRSTTI >gi|316918327|gb|ADCU01000016.1| GENE 117 140094 - 141425 637 443 aa, chain + ## HITS:1 COG:yghQ KEGG:ns NR:ns ## COG: yghQ COG2244 # Protein_GI_number: 16130883 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 37 350 12 325 325 511 82.0 1e-144 MKHWFSDGTFRTIIRNSAYLGSSNVVSALLGLIALSCAGKGMTPAMFGVLVIIQSYTKAI SDFIKFQTWQLVVQYGTPALENNNLQQFRDVISFSFGLDIASGAVAVIGGMVLLPFISHS LGLDSDSFWLAMLYCTLIPSMASSTPTGILRAVNRFDLIAVQQATKPFLRALGSVIVYFG DYGFAGFIITWYASNLIGGTMYWWFAARELRRRNIQNALRPRLFESARRIKGAWSFVWAT NFAHSIWAARNSCSTVLVGIILGPAAAGLFKIAMTFFDATGTPAKLLEKSFYPEVMRLDP RTKTPWLLGIKSALLAGGIGIIVALAILVTGGHLISLVFGAKYLQAYDLIQVMLGAIVIS MLGFPQESLLLMAGKQRAFLAAQTVASFSYVVLLVVLSHMFGVIGAAFAYFAGQCLDVLL SLIPTLQAYCNRHLLRFNAVRGE >gi|316918327|gb|ADCU01000016.1| GENE 118 141429 - 142256 436 275 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_3477 NR:ns ## KEGG: ECIAI39_3477 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 275 1 274 274 381 68.0 1e-104 MANKKFSPEVIERLFTAVEEDDVVDSHASLPQIVDLQCSQEVIKNNYALCLQFWEDGVTR KDLLRLILNQLKNGELSEKEQKQYKYIRARYKHLRFAQQLYRKKHQSGFLFSKVTVFLGR FQDGFRNKKKDIITFYGKVLRVYHLNAPVWMFVHCSLRHSQLDTADGFILYCQEQMKTLQ KLVAKPQLTGEEFHDVRKIISQLVSYYDTLRTINPNNQDALQISRFLAAINGLMGDRHDE MVADDMENLKSYDAPSVLDCDLRARLELLLSRYPL >gi|316918327|gb|ADCU01000016.1| GENE 119 142324 - 142884 363 186 aa, chain + ## HITS:1 COG:ytfJ KEGG:ns NR:ns ## COG: ytfJ COG3054 # Protein_GI_number: 16132038 # Func_class: R General function prediction only # Function: Predicted transcriptional regulator # Organism: Escherichia coli K12 # 1 183 1 183 184 229 59.0 2e-60 MALRRLLIASLLLCPLLVSAHNFVIDKPVLPINITDRGELLLNNDDVSYKCWSSIELVGK VRVVQYIAGRTSAKKKNSMLIKAIKNANFPSDRFQPTTIVNTDDVILGSGFFVLGKIEKN KRRYSWAQFIIDSDGLGRKTWQLNEESSTILVLDKFGHIQWAKDGSLTPEEVHRVLSMVQ KLIDEK >gi|316918327|gb|ADCU01000016.1| GENE 120 143038 - 144084 601 348 aa, chain + ## HITS:1 COG:PA3828 KEGG:ns NR:ns ## COG: PA3828 COG0795 # Protein_GI_number: 15599023 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pseudomonas aeruginosa # 11 335 18 351 372 116 28.0 6e-26 MAEIRRLVVIIVGFLIFIFASYSAQRYLTEAANGTLALEVVLDIVFYKVLIALEMLLPVG LYVSVGVALGQLYTDSEITAISAIGASPIRLYKAVMLLAIPLSILVTLMSMYARPWAYAQ IYQLEQQSQSELDVSHLRAKMFNINDSGRMILSEEINPDSNHLTDVLIYTSSGNKTSVYR AKTVDVTNPSPITPSVILHSGTGYTLRHQGTDDSERVYRNLTLDLKPLNLSVDAKRKAKS VIALIRSADPADYAEVQWRESRGVNAFLMALLAISLSRVKPRQGRFSTLLPLTILFTVIF YGGNVCRSLVASGYLSVTPGVWLVPMLMFIGVLVLIARDFSLLQKLFR >gi|316918327|gb|ADCU01000016.1| GENE 121 144384 - 145160 482 258 aa, chain + ## HITS:1 COG:PM0197 KEGG:ns NR:ns ## COG: PM0197 COG0795 # Protein_GI_number: 15602062 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pasteurella multocida # 6 251 108 351 356 102 28.0 6e-22 MALCAGLMLTVSLGAIDEWIASPLEQRALQMKNAAIALDESNDSVGNILWARQGNEFVTV KSLSEDNQPVGVEIFYYRPDRSLESYIYAQKATILDGNIWMLSGINEKRWVSGKETVETK ESLQWKSIFTGMTLKELTMPSSTFSIKQLNQYITYLQNTDQPSIEFKIALWQKLGRAILT LAMILLAIPFTFSVPRSPGLGSRLAIGVIVGLFTYISYQIVVNVGLLFSLNAAIVTLTPP AFILAIALVLVYQFDQRH >gi|316918327|gb|ADCU01000016.1| GENE 122 145237 - 146409 848 390 aa, chain - ## HITS:1 COG:CC1162 KEGG:ns NR:ns ## COG: CC1162 COG0156 # Protein_GI_number: 16125414 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Caulobacter vibrioides # 1 388 1 389 404 416 54.0 1e-116 MGLYDKFSRLASEREQFCTSGINPFGTRIDEVYSATEGRIGNQKVILAGTNNYLGLTFDA QAIADGQDALATQGTGTTGSRMANGSYESHIALEHEIADFFDRPSAIVFSTGYTANLGII SALAGHGSVVLLDADSHASIYDACTLGGAEIIRFRHNDAKDLERRMIRLGDRAREAIIIV EGIYSMLGDVAPLAEIVDIKRRLGGYLIVDEAHSFGVMGATGRGLAEEVGVEQDVDIIVG TFSKSLASIGGFAVGSKAMDVLRYASRPFIFTASPSPSCIASVRSVLKTIAKHPELRQKL WSNSHRLYSGLEKLGYELGSHISPVVPVIIGHKDDGLRIWRELIGLGVYVNLILPPAAPA GITLLRCSVNAAHTDEQIDDIIQAFAKLKK >gi|316918327|gb|ADCU01000016.1| GENE 123 146396 - 146656 259 86 aa, chain - ## HITS:1 COG:no KEGG:S3224 NR:ns ## KEGG: S3224 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 81 1 81 82 111 83.0 1e-23 MLNRKIVMDYTLSCLEGMVESGLDIKPDSDLVNDLGLESIKVMDLLMMLEDRFDISIPIN ILLDVKTPAQLLEALIPYLENTNGPL >gi|316918327|gb|ADCU01000016.1| GENE 124 146688 - 147602 465 304 aa, chain - ## HITS:1 COG:CC1164 KEGG:ns NR:ns ## COG: CC1164 COG0702 # Protein_GI_number: 16125416 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Caulobacter vibrioides # 4 287 8 288 317 118 31.0 1e-26 MNKIVAVTGGTGFIGQHIVNNLLSHGFNVRALTRSARNDTRTNISWVRGSLEDSYSLAEL VDSANFIVHCAGQVRGHNEDVFTQCNVTGSLRLMQAAKESGVCERFLFMSSLAARHPELS WYANSKRVAEQQLTNMASGISLGIFRPTAVYGPGDKELKPLFSGMLRGVLLRFGALETRL SLLHVSDLAEAVSQWLMAEQPQAHSYELCDGVSEGYDWRRIQEIGATVRNGSVRLVGIPL PLLKLVADISTLTGFLAGKEPMLTRCKIRELTHLDWSASNKHLSENINWFPKISLENALR SGLF >gi|316918327|gb|ADCU01000016.1| GENE 125 147599 - 149299 617 566 aa, chain - ## HITS:1 COG:CC1165 KEGG:ns NR:ns ## COG: CC1165 COG0318 # Protein_GI_number: 16125417 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Caulobacter vibrioides # 1 550 11 563 567 458 42.0 1e-128 MRYADFPTLVEALDYAAQGSAGMNFYDRRNQLEAVLEYRDLQSKAIAGARRLLSLNLNKG DRVAIIAETSVGFVEAFFSCQYAGLVAVPLAIPMGVGQRDSYTAKLQGLLASCKPAAIIS SNEWLSLINVVNIDSPTIHILSNEDFNALPEMDIELQLPSPDDIAYLQYTSGSTRFPRGV IITHREVMANLRAISHDGIKLRDGDRCISWLPFYHDMGLVGFLLTPMATQLSVDYLSTQD FAMRPMQWLKLISKNRCTVSVAPPFGYNLCLRRVNDKDLAELDLSCWRVAGVGAEPISAE QLNQFGECFSKAHFDSKAFMPCYGLAENALAVSFGEEAIGTQINEVDRDILENQGRAVAP TKGTRAVSTFVNCGKALPGHLIEIRNEVGMPLPEQEIGHIYISGPSLMSGYFQDLASQRD IKSTGWMDTGDLGYLLNGYLYVTGRIKDLIIIRGRNIWPQDIEYIAEQEPEIHSGDAIAF VTSQEQIILQIQCRVGSEQRRAQIVHSLTARIQSEFGVSADIELLPPHSIPRTSSGKPAR AEAKKRYLTAFANTLSPQMQMADCAQ >gi|316918327|gb|ADCU01000016.1| GENE 126 149820 - 150944 552 374 aa, chain + ## HITS:1 COG:no KEGG:ECED1_3624 NR:ns ## KEGG: ECED1_3624 # Name: yghO # Def: putative DNA-binding transcriptional regulator # Organism: E.coli_ED1a # Pathway: not_defined # 1 374 7 380 380 652 80.0 0 MVRIEKVMNEHDLKDFISFPSTLYKHDPNWIAPLFVERAEHLSKKNPGSEHIKWQAWVAK KDEIVVGRITAQIDTLHRELYGEDTGHFGMIDAIDDCEVFSALFAAAEEWLKSFGARKIT GPFSLNINQESGLLIDGFDTPPCVMMPHGKPYYETNIRQQGYEKGVDLLAYWMRCSELYF SPSLLQLMEQVRKKVTVRCIKRKQFDDEMQVMKEIFNSGWQHNWGFVPFTEHEFATMGAQ LKYLVPDDMIYIAEIDSVPCAFIVGLPNINEAIADLNGRLFPFGWAKLLWRLKISGVRTA RVPLMGVRQEYQFSRIGPIIALLLIEALRDPFAKRKIEALEMSWILESNTGMRTILERIG AMPYKQYRLYEKQL >gi|316918327|gb|ADCU01000016.1| GENE 127 151166 - 151921 244 251 aa, chain - ## HITS:1 COG:YPO1580 KEGG:ns NR:ns ## COG: YPO1580 COG2977 # Protein_GI_number: 16121850 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phosphopantetheinyl transferase component of siderophore synthetase # Organism: Yersinia pestis # 35 237 34 245 246 105 33.0 8e-23 MFTLSTIHTALPFLHRIDVGVVTLLPELRYCQIMYDSHYYQDALFRELEIPFPEILNNAS VKRRAEYAAARYAAKLLLDKEGCHDSVGSASSRAPIWPDGWSGSLSHTDKFAIALMAPLN SALTLGVDIEMLISKSIKKTAHIFTTPLEQTLLAACNISYETALLITFSSKESAFKALYP EVNRSFGFEATRVCQIDMLTRSITLELTQTLSSHRTKGSLLTCYFDLQDDKVITFIAEPT MKLYKANGYFR >gi|316918327|gb|ADCU01000016.1| GENE 128 152829 - 153473 656 214 aa, chain + ## HITS:1 COG:no KEGG:ETAE_0306 NR:ns ## KEGG: ETAE_0306 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 213 1 212 213 269 76.0 6e-71 MKRILTATALSLAMMSTFTWAADSAATVPAATTTVSTNVLTAQQAKEVAKVAQQGFNAMR DVQYARVSLFRGYPDVAQKLVNQANTLLSDDSTNWKEFIKTDKKTPLAGDNYVVINASIS LAEDFVATPEKQKAIDSANAKFKKGDHKGAMEELRLAGVGVTETQYLMPLKQTQQAVKKA QQLLKDGKYYEANLALKGAEDGIITDSVTLVDAN >gi|316918327|gb|ADCU01000016.1| GENE 129 153562 - 154137 514 191 aa, chain - ## HITS:1 COG:YPO0341 KEGG:ns NR:ns ## COG: YPO0341 COG1309 # Protein_GI_number: 16120676 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 191 1 191 191 244 71.0 6e-65 MQRELVLSQVLSLLEQQGLATTTLERLAPQLDIAKEELVRFWPDREALLYDSLRYHAQQI DTWRRQVLLDESLSARDKILARYHVLAECVQQQRYPGCLFIAACSFFPEDDHPIHQLAEQ QKTASYEFTLALLQDIDMDDPEMVAHQMELVLEGCLSRLLVKRQLKDVETARRLAEDILQ IARCRRNGALS >gi|316918327|gb|ADCU01000016.1| GENE 130 154197 - 155891 1174 564 aa, chain - ## HITS:1 COG:YPO0345 KEGG:ns NR:ns ## COG: YPO0345 COG4232 # Protein_GI_number: 16120680 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Yersinia pestis # 1 563 1 589 595 761 68.0 0 MAQRFFTLVFLFLCTLFPAHAALFDSKTQFVPVDQAFAFDFKQQEHKLDLSWQIKSGYYL YRQQIKIEPRQATLNDFTLPTGIEHHDEFYGKTAIFKDALTLNLLLQNADKGASLIVTYQ GCAEAGFCYPPETKTIPLDSVAPLNADASSGITPISEPATPSLPFSPLWALLIGIGIAFT PCILPMYPLISAIILGQDRQQSYRRIFVLSLVYVQGMALTYTLLGMVVAAAGLQFQAAFQ HPYVLIGLSVLFVLLALSMFGMFTLQLPSSLQTRLTLWSNKQRSGSLAGVFVMGALAGLI CSPCTTAPLSAILLYIAQSGNTLAGGGTLYLYALGMGIPLILVTTFGNRLLPRSGPWMQY VKEAFGFVILALPVFLLERILGDEWGLRLWSLLGVAFFGWAFALSLKSSHRFARIMQIAM FGAALICSRPLQDWAFGSTSQTAIAHLPFQKINNISELNHALATAKAENKPVMLDLYADW CVACKEFEKYTFSDPSVRQQLSDTVLLQADVTANNAEHAALLKHLNVLGLPTILFYNAQG QEQPQQRVTGFMQASEFNAHLHNR >gi|316918327|gb|ADCU01000016.1| GENE 131 155867 - 156217 309 116 aa, chain - ## HITS:1 COG:YPO0346 KEGG:ns NR:ns ## COG: YPO0346 COG1324 # Protein_GI_number: 16120681 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tolerance to divalent cations # Organism: Yersinia pestis # 1 115 1 118 119 157 71.0 4e-39 MSDTEKSQPETITDAIVVLCTAPDEACAQQLASLALSEKLAACVTLLPGASSMYYWEGKL EQEYEVQMILKSERSYQEALLNFLKQHHPYQTPELLVLPVHAGDKDYLSWLNASLR >gi|316918327|gb|ADCU01000016.1| GENE 132 156359 - 157660 1160 433 aa, chain - ## HITS:1 COG:STM4325 KEGG:ns NR:ns ## COG: STM4325 COG2704 # Protein_GI_number: 16767574 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Salmonella typhimurium LT2 # 1 433 1 433 433 634 89.0 0 MLVLELVIVLLAIFLGARLGGIGIGFAGGLGVLVLAMIGVKPGNIPFDVISIIMAVIAAI SAMQVAGGMDYLVHQTEKLLRKNPKYITILAPIVTYFLTIFAGTGNISLSALPVIAEVAK EQGIKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGHGVSYIHLLMVVIPSTFLAVL VMSLIVSWCFDSKLSDDPVYQKRLSEGLIELRGDKQVVIKPRAKSSVWLFLLGVVCVVCY AIINSPSLGLVEKPLMNTTNAILIIMLSVATLTTILCRVETDSILNSSTFKAGMSACICI LGVAWLGDTFVQANLEWIKETAGTVIQSHPWLLAVIFFFASALLYSQAATAKALMPMALA LNVSPLTAVASFAAVSGLFILPTYPTLVAAVQMDDTGTTRIGKLVFNHPFFIPGTIGVAL SVIFGFVLGSVML >gi|316918327|gb|ADCU01000016.1| GENE 133 157897 - 159333 1584 478 aa, chain - ## HITS:1 COG:YPO0348 KEGG:ns NR:ns ## COG: YPO0348 COG1027 # Protein_GI_number: 16120683 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Yersinia pestis # 1 478 1 478 478 890 91.0 0 MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAL ANKELHTIPRKIADTIIQACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLE LMGHQKGEYQYLNPNDHLNKCQSTNDAYPTGFRIAVYSSIMKLLDAINQLREGFDRKAKE FENILKMGRTQLQDAVPMTLGQEFKAYSVLLKEEVKNLQRTSELLLEVNLGATAIGTGLN TPEGYSQLAVQKLSEVSGLPCSVAEDLIEATSDCGAYVMVHGALKRLAVKLSKICNDLRL LSSGPRTGLNEINLPELQAGSSIMPAKVNPVVPEVVNQLCFKVIGNDTTVTMAAEAGQLQ LNVMEPVIGQAMFESISILTNGCYNLLEKCINGITANKEVCESYVFNSIGIVTYLNPFIG HHNGDIVGKICAETGKNVREVVLERGLLTEAELDDIFSVENLMHPAYKAKRYTDESEQ >gi|316918327|gb|ADCU01000016.1| GENE 134 159696 - 160205 399 169 aa, chain + ## HITS:1 COG:YPO0349 KEGG:ns NR:ns ## COG: YPO0349 COG3030 # Protein_GI_number: 16120684 # Func_class: R General function prediction only # Function: Protein affecting phage T7 exclusion by the F plasmid # Organism: Yersinia pestis # 2 169 1 192 192 188 55.0 4e-48 MLRWLPLMLIFLFVYIEISIFIKVAAVLGVALTLLLVVLTSCLGASLVRHQGMKTLMQMQ QKMAMGESPAAEMVKSVSLVMAGFLLILPGFFTDFLGLLLILPPVQKHLTLKLLPYFSFS RSGGGFGGGTFYGSQGGNTFDGEFERKDESHPRLDNRLDNEDDQYKNDK >gi|316918327|gb|ADCU01000016.1| GENE 135 160441 - 160734 394 97 aa, chain + ## HITS:1 COG:ECs5123 KEGG:ns NR:ns ## COG: ECs5123 COG0234 # Protein_GI_number: 15834377 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Escherichia coli O157:H7 # 1 97 1 97 97 149 92.0 8e-37 MNIRPLHDRVIVKRKEVESKSAGGIVLTGSAAGKSTRGEIVAVGKGRILENGEVKPLDVK VGDIVIFNDGYGVKAEKIDNEEVLIMSESDILAVVEA >gi|316918327|gb|ADCU01000016.1| GENE 136 160796 - 162439 2351 547 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 547 1 547 547 910 86 0.0 MAAKDVKFGSDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI DKAVVAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG TGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV ISEEIGMELEKATLEDLGQAKRIVINKDTTIIIDGIGDEAAIQGRVGQIRKQIEDATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI RVAGKIAGLKGANEDQNVGIKVALRAMEAPLRQIVINAGEEASVIANNVKAGEGSYGYNA YSEEYGDMIAMGILDPTKVTRSALQYAASIAGLMITTECMVTDLRDDKADMGAAGGMGGM GGMGGMM >gi|316918327|gb|ADCU01000016.1| GENE 137 162662 - 163021 294 119 aa, chain + ## HITS:1 COG:no KEGG:ETAE_0327 NR:ns ## KEGG: ETAE_0327 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 5 119 1 115 115 184 87.0 7e-46 MGKKMRIKGLLGLTAVMLLAGCSSTTQLDTAGQQIKFTDTKPGTECQLLGEVTGSQSNWL SGQGGESSSMRGAANDLRNKAAAMGGNVIYGAVSPSENFWSGFAPLDSKMSGQVYKCPN >gi|316918327|gb|ADCU01000016.1| GENE 138 163171 - 163791 307 206 aa, chain + ## HITS:1 COG:ECs4753 KEGG:ns NR:ns ## COG: ECs4753 COG1280 # Protein_GI_number: 15834007 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 5 205 2 204 206 97 30.0 2e-20 MVGDLLALLTISTTILLGAMSPGQSFVLVARTAVSSSRRGALAVSLGMGVGCMIFAIIAL TGLHSILTLVPWLYTALKTAGGIYLIWLALKIFFRPQTTIDLGSTQGSELNIRRAFITGL MTQLSNPNTALVFGSIFAATLSHKIPVYMYLLLPVLALLIDFVWYGLVAYALSSDRPRRW YLGYRRYLDRLSGCVMAILGVRLIMK >gi|316918327|gb|ADCU01000016.1| GENE 139 163863 - 164723 555 286 aa, chain - ## HITS:1 COG:BH1906 KEGG:ns NR:ns ## COG: BH1906 COG2207 # Protein_GI_number: 15614469 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 31 277 36 288 299 82 24.0 9e-16 MKQQDLLERITLNERFVSFNRMHNMSANYYHWHQCLELLFVSQGYGIVIVDNQQYTAKPG RLFIFPPFRLHKVHVEQDDRNIYHRTTIHVDHTIVESFLAPFPRQQEHFRHICNSQGLAQ VYDLEADADFMERLLAQFDQREPQQSHQLAELSLLLMQMLELLPESMATHPAYTSTNASR VMSWIEQHYAQKFVLDDLAKALNLSKSYTSRVFRQETGGSIQEYLATRRIKRACELLSMS DEPIESIANQTGFSETSYFITTFRNKLGQTPLQYRKLRRLQASFEQ >gi|316918327|gb|ADCU01000016.1| GENE 140 164950 - 166779 628 609 aa, chain + ## HITS:1 COG:SMb20536 KEGG:ns NR:ns ## COG: SMb20536 COG4289 # Protein_GI_number: 16264263 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 56 573 60 574 617 409 40.0 1e-113 MQPTNITLNPSLENKNDTELALKEMVAALSPLMQVERSGLDIANTTTHYGAEIAKMEGFS RVLWGLFPLIHGGGNCEQWEFFIQGIRCGTDPNHPAYWGDISDYDQRCVEMAVYGLGLAL LNKKLLSYFTPKEQENIYLWLNQSAEAEIPDNNWNYFPILVQVGFLKAGLPFNKDAVEKR FSSMEAYYIGNGWYSDGPDRPRDYYISMGFHYYGLLYAKMMEKEDPQRSQELRQRATLFA QDFIWMFARDGSAVPFGRSLSYRFAEAAFWSAAAFSDLNVLDKGTIKGLILRHLRWWMKQ PIFDRDGILSIGYAYPNLIMAEDYNAPGSPYWAFKLFLILALPDSDAFWQEAEKPLPTMN GGHVIHEAVQILTHNDDSRHVWMTTSGQRELNNFVNTDAKYTKFAYSNRFGFTLDRGRYG LSHAGCDSALLLSECDGYYRSRRVCDAILTHDDFIYSRWQAWPDVSVETWLIPVNHWQVR VHHIINERHLEAIDGGFALKYRPLPKVKTEDDRVQITTDDDFCILRSFSRGSAADTVITP PNSHILFADRAIIPVLRTSLERGEHWLMSAIGAFPSEEYKSEINVRLEKHHLSITVNGEN KIILLTVIK >gi|316918327|gb|ADCU01000016.1| GENE 141 166826 - 168115 811 429 aa, chain + ## HITS:1 COG:ECs3241 KEGG:ns NR:ns ## COG: ECs3241 COG0477 # Protein_GI_number: 15832495 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 9 402 8 400 415 238 32.0 2e-62 MKSISEINRGAYYRISTFIFLYFFTWSSSFGLYALWLSQKVGLDSVTIGSVFAINGVFAV ILKPIYGYIMDKIGMSKKLLYFVIVISACMAPFFVYLYLPLLLTHTFVGIVVGALYLSLG WYAGVAASESYADRFSRLYKMEFGQIRMWGSLGWALAASVSGILFNLTPTYNFMVSSITS LLMLLVMVSLKISDEKLKNNNVISNDKIVFSDVIALLKNHKFWMFCLYVAGVAWMMFIAE QQFPRYFVSFFASKEQGNAMYGYLSTAQSGTEFLMMMVIPWVVNRYGAKKTLLMTGCVVG ARLIASGLTSDPIMISFIKPLYGLEISMLLISVFKYIAEHFDKRVNATMYLLGYQAMIYV GSIVVAPPAGYLYDRIGFEHTYLLMGSCALVFTLISAFTLSECHCSRSKPTILPEPSTAE TDAIHGSKA >gi|316918327|gb|ADCU01000016.1| GENE 142 168175 - 169365 755 396 aa, chain + ## HITS:1 COG:no KEGG:CKO_04418 NR:ns ## KEGG: CKO_04418 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 396 1 396 396 570 68.0 1e-161 MLINLIKEPLRPIELNRIDRSALKHQLQLAQSCVLQKLSHNLHAFGDKFPAETCEKGRYK LTENEEWTTSFWTGQLWLAWELSGREEFRLAAEKQVRSFGHRITHRIDTDTHDLGFLYTL SCVSAWRLTGNRDARCFALHAAEALLERYSSTAQIIQAWGDLNDPDQHGRMIIDCNMNLP LLYWASEQTGDPRFAAAAQAHAHQAAKYIIRPDASTYHTYYMDTVSGEPRYGNTHQGYAD DSCWSRGQAWGIYGFLLTYHYTGESEFVEISRRLAHYFLNRLPEDDVCHWDLALLGTDQY RDSSAAAIAVCGLLELLETLPVLDPERAYYEEMALRILSSLTQNYLAGDEDQTDGLLKHS VYHLSGGKGIDECCSWGDYFYLEALVRATRVWKMYW >gi|316918327|gb|ADCU01000016.1| GENE 143 169410 - 170885 1232 491 aa, chain - ## HITS:1 COG:ycgC_1 KEGG:ns NR:ns ## COG: ycgC_1 COG3412 # Protein_GI_number: 16129161 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 135 2 137 149 149 60.0 1e-35 MVNIVVVSHSAKLADGVAELAAQMTQNGCRLVVAAGVDDPDHPIGTDAIKVMQAIEEVFD PSGVLIMMDLGSALLSTETALELLDPEMSARVKACSAPIVEGTLAAVVAASAGASLAEVE REAQSALQAKKAQLGEKEPQAKEMTSESPTLRSDERGVSWKINNPNGLHVRPAAKLATAM APFDAELVLYKLDSVKGNRHADPRSLNQLALLQIRKDDEIRLVAKGSQAEEALAAFKQLA ESNFGENIAPDTIAPDTNAGQILQGKSVMDTQVSAPAFVLPTQDVEVPDRQILSDRIEIE QQRLRQAIAKTLQDLSRLADRTNQLLGKQHAGIFGAHSMLIDDPDLQNSAFSRIASSLCS AEIAWQTELTEMADAYRELDDEYLQARELDVRDILQRTLLHLAGETQEIQNPSVPSILLA RELMPSDTIMLDRRLVQGIVLSQGNALSHSAILANALGIPMIVGVGDSLKRAQEGQKITL NAARGEVILGH >gi|316918327|gb|ADCU01000016.1| GENE 144 170920 - 171549 582 209 aa, chain - ## HITS:1 COG:ECs1704 KEGG:ns NR:ns ## COG: ECs1704 COG2376 # Protein_GI_number: 15830958 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli O157:H7 # 1 205 1 205 210 301 73.0 5e-82 MSLTKQQIVNWLMRCGEVFAEQKDFLTQLDTEIGDADHGLNMNRGFNKVVEKLPSFADKD IGFILKNTGMTLLSSVGGASGPLFGTFFIRASQSTAAKQSLSLSELTQMLKEGVEGVVSR GKAEPNDKTMCDVWWPVVASLEASSQKDLSVPQALDLAVDAARQALEGTITMQARKGRAS YLGERSIGHQDPGATSAWLMMQTLAEVTH >gi|316918327|gb|ADCU01000016.1| GENE 145 171551 - 172621 903 356 aa, chain - ## HITS:1 COG:ycgT KEGG:ns NR:ns ## COG: ycgT COG2376 # Protein_GI_number: 16129163 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli K12 # 1 355 11 365 366 575 76.0 1e-164 MKKLINQVETVLQEQILGLVEAHPELTLHQEPVFVTRADAPVVGKVGILSGGGSGHEPMH CGFIGEGMLDGACPGEIFTSPTPDQMFECGQAIDGGKGVLMIIKNYTGDVLNFETAAELL HDSGTQVGTILVDDDVAVKDSLYTAGRRGVANTVLIEKLLGAAAARGDSLDQLVELGHKL NNEGHSIGIALQACTVPAAGKPSFVLPENVMEFGVGIHGEPGIERREFTTLNQTVDEMFA TLIAHGKYQRTLRSWDRKAGEWKEQTQPKHPLQKGDRVIALVNNLGATPLSELYGVYHRL QHCCTEFGITIERKLVGSYCTSLDMQGISITLLKADTETLSLWDAPVNTPALRWGM >gi|316918327|gb|ADCU01000016.1| GENE 146 172724 - 173824 1012 366 aa, chain - ## HITS:1 COG:STM4108 KEGG:ns NR:ns ## COG: STM4108 COG0371 # Protein_GI_number: 16767374 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 366 1 364 367 422 59.0 1e-118 MLKVIQSPSKYIQGANALQSIGQYAKMLANNYFVIADDFVMKLAGDTVGSSLKQHEVESH FALFGGECSHKEINRLIAELKKHGCKGVIGIGGGKTLDTAKAIAFYQKLPVIVVPTIAST DAPTSALSVIYSEEGEFEEYLMYPTNPDMVIMDTAIIAKAPVRLLVAGMGDALSTYFEAQ ACYDAHAISMAGGESTLAAVTLARLCYETLLEEGYKAKLAVEAGVATTAVERIVEANTYL SGIGFESSGLAAAHAIHNGFTVLEECHHLYHGEKVAFGTLTQLVLQNSSSEQIETVLDFC LQVGLPVTLKEMGVKADDKLEEKIMAVAKASCAEGETIHNMPFKVTPEQVFAAILAADRL GQAWLK >gi|316918327|gb|ADCU01000016.1| GENE 147 174342 - 175025 602 227 aa, chain + ## HITS:1 COG:ygiB KEGG:ns NR:ns ## COG: ygiB COG5463 # Protein_GI_number: 16130933 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 227 12 234 234 254 74.0 1e-67 MKRTKNINRAAFRKSWRFAPVAIAVSAVFMLAGCEKTDETVSLYQNADDCSNANPSMSAQ CKESYQNALKEAEKTAPKYASREDCIAEFGEGQCTQAPAQAGMAPSTNGETQAQPQQSGS FWMPLMAGYMMGRMMGGGAYNQQPLFSSKSATSPANGKFVDATGKSYGPATAGGRTMNVP KTAMAPKPATTSTVTRGGFGESVAKQSAMQRSSAATSSKSGTRSMGG >gi|316918327|gb|ADCU01000016.1| GENE 148 175028 - 176188 1211 386 aa, chain + ## HITS:1 COG:YPO0660 KEGG:ns NR:ns ## COG: YPO0660 COG0754 # Protein_GI_number: 16120985 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Yersinia pestis # 1 385 1 385 386 671 83.0 0 MKRVPISERPDWREKATEYGFQFHTMYGEPYWCEDAFYQFSLAQVEELEETTAELHQMCL KVVEKVIASDELMTKFQIPKHVWEFVRSSWRTQQPSLYSRLDLAYDGVNPAKLLENNADT PTSLYESAFFQWIWLEDQIAAGKLPQDADQFNSLQEKLIERFAELKEAHGFGLLHMACCQ DTDEDRGTVQYLQDCAHEAGLATEFVFIEDIGLGERGQFTDTQDQVISNLFKLYPWEFMM REIFSTKLEDAGVRWLEPAWKSIISNKALLPMLWEMFPNHPNLLPAYFADGNQPELDHYV VKPLFSREGANIRIVENGKEVASVDGPYGEEGMIIQQFHPLPKFGDSYVLIGSWLVNDQP AGMGIREDHSLITQDLSRYYPHVIVD >gi|316918327|gb|ADCU01000016.1| GENE 149 176268 - 178487 1755 739 aa, chain - ## HITS:1 COG:ECs5113 KEGG:ns NR:ns ## COG: ECs5113 COG1982 # Protein_GI_number: 15834367 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 712 1 711 715 1233 80.0 0 MNIIAIMNDLSAYFKEEPLRELHQELEKEGFRIAYPKDRSDLLKLIENNSRLCGVIFDWD KYNLELSAEISELNKLLPIYAFANTYSTLDVNMSDLRLNVRFFEYALGSAQDIATKIRQS TDQYIDTILPPLTKALFKYVKEEKYTFCTPGHMGGTAFDKSPVGSLFYDFFGENTMRSDI SISVSELGSLLDHSGPHRDAEEYIARTFNADRSYIVTNGTSTANKIVGMYSSPAGATILI DRNCHKSLTHLMMMSNVVPVYLRPTRNAYGILGGIPQSEFTRASIEEKVKNTPNATWPVH AVITNSTYDGLFYNTEYIKKTLDVKSIHFDSAWVPYTNFHPIYQGKAGMSGERVPGKIIY ETQSTHKLLAAFSQASMIHVKGEINEETFNEAYMMHTSTSPHYGIVASTETAAAMMRGNA GKRLINGSIERAIRFRKEIRRLRAESDGWFFDVWQPDNIDEVACWPLNPRNEWHGFPNID SDHMYLDPIKVTLLTPGLSPNGTLEDEGIPASIVSKYLDEHGIIVEKTGPYNLLFLFSIG IDKTKALSLLRALTDFKRVYDLNLRVKNVLPSLYNEAPDFYKEMRIQELAQGIHALVKHH NLPDLMYRAFEVLPQLVMTPHDAFQEEVRGNIEPCALDDMLGKVSANMILPYPPGVPVVM PGEMLTKESRPVLSFLQMLCEIGAHYPGFETDIHGVHRDGSTGKYMVVVLKEGADEPGDK PSDTVKKAPGKKPSAAKKK >gi|316918327|gb|ADCU01000016.1| GENE 150 178580 - 179905 1386 441 aa, chain - ## HITS:1 COG:STM2558 KEGG:ns NR:ns ## COG: STM2558 COG0531 # Protein_GI_number: 16765878 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 427 1 427 443 654 83.0 0 MASAKKIGLIACTGVVAGNMMGSGIALLPANLASLGSIAIIGWIVALIGAISLAYVYARL ATKNPQEGGPIAYAGEIGPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPMFNSPIP AGIACIAIVWIFTFVNMLGGAWVSRLTTIGLVLVLIPVIGTGIAGWYWFDMGTYQANWNT SGGTDYHAVIKSILLCLWAFIGVESAAVSTGMVENPKRNVPIATMLGTFLAGIVYIAATQ VIAGMYPASQMAASGAPFAVSASTMVGSWAGPVVSAFTAFACLTSLGSWMMLVGQAGARA AHDGNFPKVYGEMDKDGIPRKGLFLAAIKMTVLMILITVMNASGGKASDLFGELTGIAVL LTMLPYFYSCIDLIRFDGANLKNILSLIASVLGCVFCFIALMGANSFELAGTFIISLIIL MFYSRKMGRDKEASATTGGQS >gi|316918327|gb|ADCU01000016.1| GENE 151 180118 - 180342 116 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVIMGMFYRNDKYEFNYFEWFYVSINIIVILHSCLCMMGHDWSLFSPLPQYYLRCYSAGT CVTSQHCLSRLYLG >gi|316918327|gb|ADCU01000016.1| GENE 152 180720 - 180953 122 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKFLRNSLIGILSLSVVGCANFSGDDFKTLGALVLIVGVVAAIAVSDSGDDSSYDSSNN YDHHDYHHDDKHHHHEH >gi|316918327|gb|ADCU01000016.1| GENE 153 181056 - 181553 213 165 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTKDLVILLLLASVSLKAGAVLPSDFYQTEAGKVFSALLKNDRKNFDSGNKTVFKWSKDI DENTLMSNALSGRKSVEIYAIYSVINNHPDTFSFENFRQKKTSKMDMLKNFSNKFAEDVS AICGRYFKDSKAFSMPSISSTECDARVSNLQQRVEAASEIKSAQR >gi|316918327|gb|ADCU01000016.1| GENE 154 181787 - 182320 449 177 aa, chain + ## HITS:1 COG:YPO0932 KEGG:ns NR:ns ## COG: YPO0932 COG3091 # Protein_GI_number: 16121236 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 10 169 5 164 170 229 70.0 1e-60 MTQRALVSRRLPIALQQAVMQCLRNALARANAQLKTQYPEPKISYQQRGTTAGTAWLQDW EIRLNPVLLLENGQAFIDEVVPHELAHLLVYKQFGKVSPHGREWQWMMGHVLGIEPRRTH KFGVESVSGKTYPYRCACQLHQLTVRRHNKVMRKESEYRCRQCGQVLSFSPGTIAER >gi|316918327|gb|ADCU01000016.1| GENE 155 182449 - 183159 429 236 aa, chain + ## HITS:1 COG:YPO0933 KEGG:ns NR:ns ## COG: YPO0933 COG2356 # Protein_GI_number: 16121237 # Func_class: L Replication, recombination and repair # Function: Endonuclease I # Organism: Yersinia pestis # 22 235 21 234 235 356 80.0 2e-98 MLRKFYYALTLSTLLAYPFSGQAQKINNFTQAKAAAVKVNQDAPGSFYCGCKIEWQGKKG IPDLESCGYQPRKNLNRASRIEWEHVVPAWQFGHQMQCWQDGGRKNCAKIPQYVKIETDL HNLQPAVGEVNGDRNNFMYSQWRGGEGQYGQCPMKVDFKNKQAEPPARARGAIARTYFYM RDQYNIRLSKQQTQLFDVWNRQYPVTMWECLRDQRIANMQGNHNPYVQQACENLKG >gi|316918327|gb|ADCU01000016.1| GENE 156 183283 - 184014 659 243 aa, chain + ## HITS:1 COG:STM3094 KEGG:ns NR:ns ## COG: STM3094 COG1385 # Protein_GI_number: 16766395 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 243 17 259 259 396 81.0 1e-110 MRIPRIYHPERLEAPCEIDLSEEAANHVGRVLRMSEGHEIQLFDGSNQVFVAHIVAASKK NVRVKVQSGVLEDRESPLHLHLGQVISRGEKMEFTIQKSIELGASIITPLISERCGVKLD AERMAKKLGQWQKIAIAACEQCGRNVIPEIRPTMLLEQWCAEQDDSLKLNLHPRANASIN TLPLPVERVRLLIGPEGGLSADEIAMTAGYQFTDILLGPRVLRTETTALTAITALQVRFG DLG >gi|316918327|gb|ADCU01000016.1| GENE 157 184024 - 184977 327 317 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme [Shewanella piezotolerans WP3] # 7 317 6 325 345 130 30 6e-29 MIKLGIVMDPISSINIKKDTSFAMLLEAQRRGYELHYMEMNDLYMYVGEGRARTQLLSVK EDKAGWYEFHGEQDIALSDLDVILMRKDPPFDTEFIYATYILERAEDKGTLIVNKPQSLR DCNEKLFTAWFADLTPDTLVTRKAEHIREFYAKHGDIILKPLDGMGGASIFRVKAEDPNL SVIIETLTEHSSRFCMAQNFLPAIKDGDKRVLVVDGEPVPYCLARIPKSGETRGNLAAGG RGEARPLTESDWAIARKVAPVLKEKGLIFVGLDIIGDRLTEINVTSPTCAREIEAAFPDV SVTGMLMDAIETRISKK >gi|316918327|gb|ADCU01000016.1| GENE 158 185159 - 185683 457 174 aa, chain + ## HITS:1 COG:ECs3824 KEGG:ns NR:ns ## COG: ECs3824 COG1678 # Protein_GI_number: 15833078 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 174 38 211 211 254 68.0 4e-68 MQDSRFKRTVLYVCEHNSEGAMGLVINKPLEQLTLETLLEKLKITPEPRDTKIRLDKPVM YGGPLAEDRGFVLHTPQPDFGSSVAISAECMMTTSRDVLETLGTKDQPKDVLVTLGYCSW DAGQLEQELLDNAWLTVEADANLLFHTPISERWVNAAKKLGVDIRNMATSAGHA >gi|316918327|gb|ADCU01000016.1| GENE 159 185683 - 186105 388 140 aa, chain + ## HITS:1 COG:YPO0937 KEGG:ns NR:ns ## COG: YPO0937 COG0816 # Protein_GI_number: 16121241 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Yersinia pestis # 1 138 1 138 140 233 83.0 1e-61 MGNRTIIAFDFGTKSIGAAIGQEVTGTARPLASFKANEGSPDWSKIEKMLKEWQPDLVVV GLPLNMDGTEQPVTAQARKFANRIHGRFGVQVALHDERLSTVEARAHLFAGGGYRALDKG SVDAASAVIILESWFEQQVV >gi|316918327|gb|ADCU01000016.1| GENE 160 186141 - 187166 382 341 aa, chain - ## HITS:1 COG:YPO0940 KEGG:ns NR:ns ## COG: YPO0940 COG2805 # Protein_GI_number: 16121244 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Yersinia pestis # 2 332 26 357 358 342 55.0 8e-94 MDFCDLLARSVKQNASDLHLCTGYPPVLRIDGALQTLGTEAITSREIESWLTMNLPSEAD VVWRQQHQVDFALNLNGGTRLRVNAFQQLHGPSLALRLIPSTVPTLASLATPEVLQEQLA QGSGLILVCGATGSGKSTTLAAMLNEINHHQPWHIITLEDPLEFIHTPSKSLIQQREIGS HVINFHHALRAALREDPDVILLGELRDAESIRLALTAAETGHLVLATLHTRGAAQAVERL IDVFPAEEKNFVRTQIAGSLRAVLAQQLLPKQGGGRVAAFELLLNTSAVSNLIREDKAHQ IASILQTGQRQGMQSFEQHLTHLENEGKLYKNRKITPDKTG >gi|316918327|gb|ADCU01000016.1| GENE 161 187189 - 187902 596 237 aa, chain + ## HITS:1 COG:YPO0941 KEGG:ns NR:ns ## COG: YPO0941 COG0325 # Protein_GI_number: 16121245 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Yersinia pestis # 3 236 2 232 232 313 71.0 1e-85 MNSNIQQNLEAVRSRISAAAQDCGRSPEEVTLLAVSKTKPVSDIEETIAAGQRAFGENYV QEGVSKIQYFAQTPYADELEWHFIGPLQSNKSRLVAEHFDWIHTVDRVKIAQRLSEQRPA DKAALNVLIQINISDESSKSGIDLEALDALVAQVAEMPNLRLRGLMAIPAPEEDPVKQKA VFDRMEQAFLALKKQYPHIDTLSMGMTHDMAAAITAGSTMVRIGTAIFGARDYGTNT >gi|316918327|gb|ADCU01000016.1| GENE 162 187969 - 188523 566 184 aa, chain + ## HITS:1 COG:YPO0943 KEGG:ns NR:ns ## COG: YPO0943 COG0762 # Protein_GI_number: 16121247 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Yersinia pestis # 1 184 1 184 184 222 79.0 3e-58 MLTLTFLVKTVIDLYVMILLLRIWMQWARTDFYNPLSQFIVKVTQPIVGPLRRVIPSLGP IDSSSLLVAFLLMTIKYPLLLLIQSGEISLSPYNLLFGLISVIKSAGYLVFWVIIIRSIM SWISQGRSPMDYVLLQLTEPLMAPVRRIIPAMGGLDFSAMVVILVLYMLNYLGMDLLGQL WFLL >gi|316918327|gb|ADCU01000016.1| GENE 163 188520 - 188828 247 102 aa, chain + ## HITS:1 COG:yggU KEGG:ns NR:ns ## COG: yggU COG1872 # Protein_GI_number: 16130854 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 7 99 6 98 100 135 77.0 2e-32 MIAMSTDAVKYEKEALVLRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLQKFI AKQFRVAKSQVVIEKGELGRHKQVRISQPQQIPEVVSALRSQ >gi|316918327|gb|ADCU01000016.1| GENE 164 188881 - 189474 854 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803493|ref|NP_289526.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Escherichia coli O157:H7 EDL933] # 1 196 1 196 197 333 82 5e-90 MQKIVLATGNAGKVRELASLLADFGLDVVAQTELGVDSAEETGLTFIENAILKARHAAQI TGLPAIADDSGLAVDVLGGAPGIYSARYAGEEASDRQNLEKLLDALKDVPADQRQAKFHC VLVYLRHAEDPTPLVCHGSWAGEISFAPSGDGGFGYDPIFHVPELGCSAAQLTKEQKIAV SHRGQALKLLLEAMRNA >gi|316918327|gb|ADCU01000016.1| GENE 165 189467 - 190597 878 376 aa, chain + ## HITS:1 COG:YPO0946 KEGG:ns NR:ns ## COG: YPO0946 COG0635 # Protein_GI_number: 16121250 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Yersinia pestis # 1 376 1 376 376 663 82.0 0 MLKLPPLSLYIHIPWCVQKCPYCDFNSHAQKGDIPSTEYVDHLLADLDADVAFTSGREIG TIFIGGGTPSLLSAEGMQRLMDGVRARLPLAPNAEVTMEANPGTVEADRFSAYQRAGINR ISIGVQSFSAEKLTRLGRIHGPEEAKRAAHLAQGLGLRSFNLDLMHGLPDQSLDEALDDL RQAIELNPPHLSWYQLTIEPNTLFGSRPPKLPDDDALWDIFQRGDELLRAAGYQQYETSA YAKPGYQCHHNLNYWRFGDYLGIGCGAHGKITFEDGRILRTAKTRHPRGYMQGRYLDKQH EVGNDDRPFEFFMNRFRLLEPTPRAEFQLYTGLGEAVIRAQLDEALSQNYIVETDEYWQI TEHGKLFLNSLLELFL >gi|316918327|gb|ADCU01000016.1| GENE 166 190690 - 191724 683 344 aa, chain - ## HITS:1 COG:ECs5127 KEGG:ns NR:ns ## COG: ECs5127 COG1509 # Protein_GI_number: 15834381 # Func_class: E Amino acid transport and metabolism # Function: Lysine 2,3-aminomutase # Organism: Escherichia coli O157:H7 # 1 344 1 342 342 521 74.0 1e-147 MAHIVTQNTQSREDWLQQLADVITEPAELLEYLALSDSPEWQKGHDARRLFALRVPYAFA RRMKKGDPNDPLLLQVMTSASEFITTPGYSTDPLEEQDDAIAVPGLLHKYINRALLLVKG GCAVNCRYCFRRHFPYQDNQGNKANWRQALDYIRQQPELDEIIFSGGDPLMAKDHELAWL LDEIEAIPHIKRLRIHSRLPVVIPARITETLTKRFSQSHLQILLVTHINHANEIDRELCD AMTRLKHAGVTLLNQGVLLRGVNDNADTLAALSNALFDAGIMPYYLHVLDRVQGAAHFMV SDDEARVIMRELMTKVSGYMVPKLTREIGGEPSKTPIDLGLRQR >gi|316918327|gb|ADCU01000016.1| GENE 167 191769 - 192335 676 188 aa, chain + ## HITS:1 COG:STM4334 KEGG:ns NR:ns ## COG: STM4334 COG0231 # Protein_GI_number: 16767583 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Salmonella typhimurium LT2 # 1 188 1 188 188 358 94.0 4e-99 MATYSSNDFRPGLKIMFEGEPYAVESSEFVKPGKGQAFARVKMRRLLTGTRVEKTFKSTD SAEGADVVDLNLTYLYNDGEFYHFMNNETFEQLAADEKAIGDNAKWLLDQAECIVTLWNG RPIQVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRS GEYVSRVK >gi|316918327|gb|ADCU01000016.1| GENE 168 192424 - 192555 85 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMKKIIMLALMVVAFAALSGCNTARGFGEDVQHLGGAISRVAS >gi|316918327|gb|ADCU01000016.1| GENE 169 192652 - 192783 207 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIKKSIALVCSLLVLAALAGCNTTRGAGEDVEAGGQAIQRAAQ >gi|316918327|gb|ADCU01000016.1| GENE 170 192962 - 193279 341 105 aa, chain + ## HITS:1 COG:ECs5129 KEGG:ns NR:ns ## COG: ECs5129 COG2076 # Protein_GI_number: 15834383 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 105 51 155 155 136 80.0 9e-33 MSWIILMVAGLLEVVWAIGLKYTHGFSRLTPSIITIAAMIVSMLLLAHAMKTLPAGTAYA VWTGIGAVGAAIMGIVLLGESASLPRILSLCLIVIGILGLKFSSH >gi|316918327|gb|ADCU01000016.1| GENE 171 193309 - 193857 471 182 aa, chain - ## HITS:1 COG:STM4339 KEGG:ns NR:ns ## COG: STM4339 COG3040 # Protein_GI_number: 16767588 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Bacterial lipocalin # Organism: Salmonella typhimurium LT2 # 8 174 8 175 177 227 60.0 8e-60 MSRWSRFAAIVTALLSVGCSTKPPSDVTVISDFQLPEYLGHWYEIARLNHPFERGLDHVT AHYSMRSDGGVKVVNRGYDVEKKQWKESIGKAYFTQTPNIASLKVSFFGPFYGGYNVIEL DKQYRYALICGPNKNYLWILSRTPTLDDAVKQRLLATAQKYGFKTQDLIWVNQSPIDMNS PR >gi|316918327|gb|ADCU01000016.1| GENE 172 193968 - 194324 350 118 aa, chain - ## HITS:1 COG:YPO0357 KEGG:ns NR:ns ## COG: YPO0357 COG3080 # Protein_GI_number: 16120692 # Func_class: C Energy production and conversion # Function: Fumarate reductase subunit D # Organism: Yersinia pestis # 3 118 2 118 118 170 80.0 6e-43 MNNKVYKRSDEPVFWGLFGAGGMWGAIVAPVVILIVGIMLPLGWFPDALTFERALSFSQT FIGRIFWLLMIILPLWCGLHRLHHMMHDLKIHVPAGKWVFYGLAAILSVVALIGVFTL >gi|316918327|gb|ADCU01000016.1| GENE 173 194342 - 194740 516 132 aa, chain - ## HITS:1 COG:YPO0358 KEGG:ns NR:ns ## COG: YPO0358 COG3029 # Protein_GI_number: 16120693 # Func_class: C Energy production and conversion # Function: Fumarate reductase subunit C # Organism: Yersinia pestis # 4 132 2 130 130 167 67.0 5e-42 MTTSTKRKPYVRGMQANWWQKLGFYKFYMLRESSALGNVWFSIVLIYGIFSMKDGAAGWE SFVAFLQNPLVLILNIISLLLAALHTKTWFELAPKAANIVVGDSKMGPGPVIKALWVVTI IVTVVILAVTLL >gi|316918327|gb|ADCU01000016.1| GENE 174 194755 - 195489 832 244 aa, chain - ## HITS:1 COG:YPO0359 KEGG:ns NR:ns ## COG: YPO0359 COG0479 # Protein_GI_number: 16120694 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Yersinia pestis # 1 244 1 244 244 465 87.0 1e-131 MAEMKILKMEVMRYNPEQDAEPHFVTYDVPYDETTSLLDALGYIKDNLAADLSYRWSCRM AICGSCGMMVDRVPKLACKTFLRDYPTGMRVEALGNFPIERDLVVDMTHFIESLEAIKPY IIGNNRKPEDGTNLQTPAQMEKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRY NLDTRDHGQKERMPVLNSDNGVWTCTFVGYCSEVCPKHVDPAAAIQQGKVESAKDFMIAM LKPQ >gi|316918327|gb|ADCU01000016.1| GENE 175 195482 - 197281 1594 599 aa, chain - ## HITS:1 COG:YPO0360 KEGG:ns NR:ns ## COG: YPO0360 COG1053 # Protein_GI_number: 16120695 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Yersinia pestis # 1 598 1 606 607 1097 89.0 0 MQTFNADLAIVGAGGAGLRAAIAAAEANPQLKIALISKVYPMRSHTVAAEGGSAAVTQAH DSFDYHFNDTVAGGDWLCEQDVVDHFVHNCPREMAQLEQWGCPWSRKPDGSVNVRRFGGM KIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVDEGKARGLVAMNMMEGT LVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALDHGVPLRDMEFVQYHPTGLPGS GILMTEGCRGEGGILVNKDGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR AGRTISTPRGDVVYLDLRHLGEKKLLERLPFICELSKAYVGVDPVKEPIPVRPTAHYTMG GIETNQNCETRIQGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEHAVQRSQEATP ANGSALDAQAKDVEARLHALANQEGTESWAKIRDEMGMSMEEGCGIYRTTELMQKTVDKL AELKERFKRVKITDNSSVFNTDLLYTIELGHGLNVAECMAHSAINRKESRGAHQRLDEGC TERDDVNFLKHTLTFKSADGLAPRIEYSDVKITKLQPAKRVYGAEADAQDAKNKEQANG >gi|316918327|gb|ADCU01000016.1| GENE 176 197695 - 198672 924 325 aa, chain + ## HITS:1 COG:YPO0362 KEGG:ns NR:ns ## COG: YPO0362 COG2269 # Protein_GI_number: 16120697 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Truncated, possibly inactive, lysyl-tRNA synthetase (class II) # Organism: Yersinia pestis # 1 325 1 325 325 565 84.0 1e-161 MSETASWQPSAPIANLLKRATIMSTIRRFFSDRGVLEVDTPAMSQATVTDIHLVPFQTHF VGPGAAQGMTLYMMTSPEYHMKRLLAAGSGPIYQLGKSFRNEESGRHHNPEFSMLEWYRP HYDMYRLMNEVDDLLQQVLECDSAETLSYQQAFIRHLDVDPLSADKIQLREVAAKLDLSN VADQEEDRDTLLQLLFTFGVEPNIGRDKPTFVYHFPASQASLAQISTEDHRVAERFEVYY KGIELANGFHELTDAREQRMRFEQDNRKRAALGLPQHPLDENLLAALEHGLPDCSGVALG VDRLIMLALKAERLSEVIAFPVDRA >gi|316918327|gb|ADCU01000016.1| GENE 177 199001 - 202318 2871 1105 aa, chain - ## HITS:1 COG:YPO0363 KEGG:ns NR:ns ## COG: YPO0363 COG3264 # Protein_GI_number: 16120698 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Yersinia pestis # 17 1103 25 1111 1119 1386 71.0 0 MRLITKLLITGLLMLSLPLGANAALNEKQLAQELKQAENNKNAPNQAEIVETLQSALNWL NESKESAQRTQQYQKSISDFPKLTRELRQQLSDESTPPLPASAIPANEAEQQILQISSQL LEVSRQLQQELDRSREISDSLGQVPQKQATARKDLTEAERRLQNLTTTSTPLSQAQSNQL QAEVAARKALVDELELEQLSANNRQELARLQADVLRKRHERLDLQLQDLRNTLNSQRQRE AEQALERTQQLVEQSGDLPRSIAEQLKINQELSRALNQQAARMDDIASQQRIAATQTIQV RQALSTIREQAQWLGVSTALGETLRAQVARLPDMPKPQQLDGDMAKLRVQRLHFENLLNK IEPVADYKQNDGKPLTTAQQRLLQPQLTTQRELLNSLLSGCDSQILELTKLKVANTQLID ALTEIKDATHRYLFWAADVDPLSVAAPLDVIQSLNRLLSLDTLSQLSKAFLMMLTSKETL LPLFGALLLVGFSFYSRRHYQAFMERASSKVGKVTQDHISLTLRTVFWSILVALPLPVLW AALGYGLQNAWPYPMAVAIGDGVTAALPVLWAFMISAAFAHPNGLFIAHFRWEEQQVKRA MRYYRMSIWLIVPLLMALVTFDNMDDRAFAGSLGRACFIMLCVALSLLTTSLKRAGIPLY LNKQGDGENLINHALWWILLCAPLVAAFASLFGYFNTAQILLARLESSVAIWFILLVVYY IIRRWMLIQRRRIAFERAKQRRAERLEKRTKGEEESTPHSVEGSQDIEEPVVDLDAISAQ SLRLVRSILTMVALVSLIWLWSELHSAFAFLENISLWDVTSSAKGVESIQPITLGAVLIA ILVMIVTVQLVKNLPALLELGLLQHLDLTPGTGYAITTITKYLLLLFGGLIGFSMLGIEW AKLQWLVAALTLGLGFGLQEIVANFASGLIILFEKPIRIGDTVTIRDLTGSVTKINTRAT TISDWDRKEIIVPNKAFITEQFINWSLSDAVTRVVLTVPAEASANSQEVTDVLLEAASKC SLVLDTPAPEAYLVDIQQGIQIFELRIYAAEMAHRMPLRHEIHQLILAGFQQHDLKLPFP PFQVSTDTLRQSRNSMRRTFTTGGL >gi|316918327|gb|ADCU01000016.1| GENE 178 202431 - 203414 951 327 aa, chain - ## HITS:1 COG:YPO0364 KEGG:ns NR:ns ## COG: YPO0364 COG0688 # Protein_GI_number: 16120699 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Yersinia pestis # 14 304 1 292 293 460 77.0 1e-129 MSRPNTDLLEEANVLDSIKIKLQYLLPKQGLTRLAGWGANKQAGWLTQAVIKAFVGYYKV NMKEALYPNPEHYKTFNEFFVRPLRNGVRPVADHADGLVLPADGAISQLGKIEQGKILQA KGHDYSLEALLAGNYLLAEEFKDGQFATTYLSPRDYHRVHMPCDGVLREMIYVPGDLFSV NPLTAANVPNLFARNERLICIFDTDFGPMAQILVGATIVGSIETVWSGTVNVTREGIIQR WTYPTAGEGAVALKKGEEMGRFKLGSTVINLFAANRVQFTPTLTSGSNTLMGAEFAHSVT AVPTESVTMQEESEVEPKVQPETPAAE >gi|316918327|gb|ADCU01000016.1| GENE 179 203622 - 204659 816 345 aa, chain - ## HITS:1 COG:STM4349 KEGG:ns NR:ns ## COG: STM4349 COG1162 # Protein_GI_number: 16767598 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Salmonella typhimurium LT2 # 1 345 9 357 358 555 77.0 1e-158 MSKNKLSKGQQRRVQANHQRRLTKTDNKPELDDSLFGEPQEGIVVSRFGKHADVEATDGT QHRCNIRRTIRSLVTGDRVVWRSGAQPGVKGIVEAVHERTSMLTRPDFYDGLKPIAANID QIVIVSAILPELSLNIIDRYLVACETLEIEPLIVLNKIDLLDEEGREFVEEAMNIYRHIG YRVLMVSSQTQEGIVELQDALTDRISIFAGQSGVGKSSLLNALLPELNPILVGAVSDNSG LGQHTTTAARLYHFPQGGDIIDSPGIREFGLWHLDPEQVTLGFIEFRKYLGGCKFRDCKH DNDPGCALREAAEKGEIAEERFDNYHRILESMSQVKTRKNFFNED >gi|316918327|gb|ADCU01000016.1| GENE 180 204897 - 205442 535 181 aa, chain + ## HITS:1 COG:YPO0366 KEGG:ns NR:ns ## COG: YPO0366 COG1949 # Protein_GI_number: 16120701 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Yersinia pestis # 1 180 1 180 181 325 87.0 3e-89 MSGSETNLIWIDLEMTGLNPEVDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLALMDE WNVRTHTGSGLVERVKASTFDEATAAQKTIEFLQQWVPAGVSPICGNSVGQDRRFLFRYM PELEQYFHYRYLDVSTLKELARRWKPEILAGFKKQGTHQALDDIRESVAELAYYREHFIQ L >gi|316918327|gb|ADCU01000016.1| GENE 181 206385 - 207530 596 381 aa, chain - ## HITS:1 COG:YPO0367 KEGG:ns NR:ns ## COG: YPO0367 COG1600 # Protein_GI_number: 16120702 # Func_class: C Energy production and conversion # Function: Uncharacterized Fe-S protein # Organism: Yersinia pestis # 1 381 1 411 411 652 75.0 0 MTHPLDLNQLAQHIKQWGQSLGFQQVGICDTDLSVEEPRLKAWLDKQYHGEMAWMERHGM MRARPHELQLGTLRVISVRMNYLPAHAFFAKTLKNPQLGYISRYALGRDYHKLLRNRLKR LGEMIQEYCEGIDINFRPFVDSAPILERPLAAKAGIGWVGKHSLILNQEAGSWFFLGELL IDLPLPVDKPLEEQCGRCVACMTTCPTGAIVEPYVVDARRCISYLTIELESAIPEEFRPL MGNRIYGCDDCQMICPWNRFSQLTNEDDFSPRQKLHTPKLIELFQWDEPTFLKITEGSAI RRIGHLRWLRNISVALGNAPYEAQIIPLLESRLGMSDVLDEHIVWAVKQQLEKRGENAIE IQTSQQKRLIRAVEKGLPRDA >gi|316918327|gb|ADCU01000016.1| GENE 182 207529 - 209037 1101 502 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|153825000|ref|ZP_01977667.1| ribosomal protein S15 [Vibrio cholerae MZO-2] # 18 498 8 490 490 428 45 1e-118 MTGHYRKQFSSSLSYSAYPADSVRRLEQRAVSELGLSLYQLMERAGYAAFQRARQYFPTT RRWLVLCGHGNNGGDGYVVARLARQSGIQVTLIAVEHSKALPYEAQQAQDAWVGAGGQIF GSTSDFPEDADLIIDGLLGIGLNAAPREPYASLILSANAHPAPILALDIPSGLNADTGQA AGAVIHAQHTQTFIVCKPGVLTGQARDYVGKLHCDALGLSDWLEKQNAPIARLDASLLNT WLHPRRPCSHKGDNGRLVLIGGDRGMAGAIRMAGEAALRSGAGLVRVLTHIEHVSPLLTA RPEMMVQELTDESVNAALDWADVIVIGPGLGQSEWALDAVKALQRFDKPMLWDADALNLL AKSPNVNPLRVLTPHPGEAARLLNCSVADIELDRVKAATRIQQKLGGVVVLKGAGTLMVS ENKVSIADVGNPGMGTGGMGDVLSGIIGGLLAQKLPLYDAACAGCVVHGAAADEIAKAFG ERGLLATDLFVAIRRYVNPDWD >gi|316918327|gb|ADCU01000016.1| GENE 183 209129 - 209599 494 156 aa, chain + ## HITS:1 COG:ECs5144 KEGG:ns NR:ns ## COG: ECs5144 COG0802 # Protein_GI_number: 15834398 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 236 73.0 1e-62 MKNIVLSLPDETATIALGTSLAAACDSATVIYLYGDLGAGKTTFSRGFLQALGHKGNVKS PTYTLVEPYALTPMNVYHFDLYRLADPEELEFMGIRDYFDENAICLVEWPQQGEGFLPKP DLSLHISYQGEGREAAIDAHTPHGELILTRLNGQQG >gi|316918327|gb|ADCU01000016.1| GENE 184 209606 - 211369 1073 587 aa, chain + ## HITS:1 COG:YPO0370_1 KEGG:ns NR:ns ## COG: YPO0370_1 COG0860 # Protein_GI_number: 16120705 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Yersinia pestis # 26 426 18 425 425 451 60.0 1e-126 MRMWKRICTVTWLGMVGLLLSGVVNSAQLTNIQVSNGKNEARVTLSFNGQPTYTYSSQPS SNRVLVNITETKKITSGLPMTFSGENMLSRIRAGNVSGDNTVQLIFDVTRKTKVSASNQG QIVVFTLQYDAPVAAPKPVFTQPRTSTSHSAARSAPATTSSTKGANPFNPTKPTVVTTTE TPAVPVSRRNTRYDGSKIVVAIDAGHGGQDPGAIGGNGLREKNVTLAIAKRLQNLMDADP IFQPVLTRTGDYFISVMGRSDVARKQQANLLISIHADAAPNRSATGSSVWVLSNRRANSE MAGWLEQHEKQSELLGGAGDVLANSGDDKYLSQAVLDLQFGHSQRVGYDVAVQVIRQMQS IGNLHKRRPEHASLGVLRSPDIPSLLVETGFISNAGEERLLGSAAYQEKIAQAIYKGVRN YFVTHPLQNGPKVENRPQRLVSAGSSNPVTEPQRVVSNNRTSNSSASAGATQIHVVKRGE TLLGIANRYGTTMTKLMQQNSLKKEGVWVGQKLKVPAGSNIAATATSTAKSKTASSKPKR VTHTVKRGDTLTKIAASYGVSMSKIQQANKMKSGEVQIGQTLVIPQA >gi|316918327|gb|ADCU01000016.1| GENE 185 211424 - 213340 1295 638 aa, chain + ## HITS:1 COG:YPO0371 KEGG:ns NR:ns ## COG: YPO0371 COG0323 # Protein_GI_number: 16120706 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Yersinia pestis # 1 635 1 632 635 762 64.0 0 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNG CGINKDELALALARHATSKITSLDDLEAIMSLGFRGEALASVSSVSRLTMTSRTAEQNEA WQAYAEGRDMAVTVKPAAHPVGTTVEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL ARFDVTIQLHHNGKMIRQYRAVKEDGQKDRRLGSICGTAFIQHALEIKWEHGDLAIHGWV AGPVGSRQLTEMQYSYVNGRMMRDKLITHAIRQAYQDQLKDDQQPAYVLYLTVDPHQVDV NVHPAKHEVRFHQARLVHDFIYQAVISVLQQSEQPALPEMAADEAPRWEPENRVAAGVNQ FSKTPLREASPAYGHSSTQGQASDKKKPSDNRHFSSGDGYQKREGQLYQRLMQVPEKRMP QSQEIQSSSELFPVVNPRKPELFPQPAPALFEHGESSFGRVLTIYEQHFALLERQHGIAL LNLDAAEIELRRVQLLPGTEGLRPQPLLIPVKLTLSADEIQGVQSCSERLKHLGIDLVLE RQRVTLRAVPLPLRHQNLPQLIPAFLSFLAEQPNAESETISKWLASHLITEREQWTVSQA IQLLAELERLCPELVKSPPSALLHPVDLKPAMVSLQAD >gi|316918327|gb|ADCU01000016.1| GENE 186 213364 - 214314 729 316 aa, chain + ## HITS:1 COG:YPO0372 KEGG:ns NR:ns ## COG: YPO0372 COG0324 # Protein_GI_number: 16120707 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Yersinia pestis # 1 313 1 313 313 521 82.0 1e-148 MTNNANHIYPPAIFIMGPTASGKTALAMALRQRFPVELISVDSALIYRGMDIGTAKPTAK ELAEAPHRLIDIRDPAQSYSAADFRADALREMASITAEGKIPLLVGGTMLYFKALLEGLS PLPAANPQIREQIEKQAQELGWDALHRQLQQVDPVAAARIHPNDPQRLSRALEVFLISGK TLTELTKISGETLPYNVHQFAIAPATREQLHQRIALRFEQMMASGFEAEARKLFERGDLH TDLPSVRCVGYRQMWSYFEGEIDYDEMVYRGICATRQLAKRQMTWLRGWESVQWLDSDKP AQALESVAQVVSASLD >gi|316918327|gb|ADCU01000016.1| GENE 187 214545 - 214850 374 101 aa, chain + ## HITS:1 COG:STM4361 KEGG:ns NR:ns ## COG: STM4361 COG1923 # Protein_GI_number: 16767607 # Func_class: R General function prediction only # Function: Uncharacterized host factor I protein # Organism: Salmonella typhimurium LT2 # 1 101 1 102 102 153 86.0 8e-38 MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS TVVPSRPVSHHSNNPGTGGSSNYHGSNQAPSQSSQDSDDAE >gi|316918327|gb|ADCU01000016.1| GENE 188 214949 - 216229 697 426 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 38 398 48 407 425 273 44 8e-72 MFDRYEAGEQAVLVHVYFSQERDIEDLREFESLVSSAGVEALRVVTGSRKAPHPKYFVGE GKAEEIAQAVQETGASVVLFDHALSAAQERNLEKLCQCRVIDRTGLILDIFAQRARTHEG KLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRDRISLILSRLER VEKQRDQGRRARSRADVPTVSLVGYTNAGKSTLFNHITKADVYAADQLFATLDPTLRRIE VADVGTTVLADTVGFIRHLPHDLVAAFKATLQETRQASLLLHIIDASDARVDENIDAVNT VLAEIEADEIPVLLVMNKIDMLDEFEPRIDRNDENLPVRVWVSAQTGVGIDLLFQALTER LSGEIASFELRLPPAAGRLRSRFYQLQAIEKEWVEEDGSIGLQIRLPIVEWHRLCKREHE LLKYII >gi|316918327|gb|ADCU01000016.1| GENE 189 216300 - 217559 1280 419 aa, chain + ## HITS:1 COG:ECs5150 KEGG:ns NR:ns ## COG: ECs5150 COG0330 # Protein_GI_number: 15834404 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Escherichia coli O157:H7 # 1 417 1 418 419 504 71.0 1e-142 MAWNQPGNNGQDRDPWGGSKNDGGNSGGNNNNGNNNNRGGRDQGPPDLDDIFRKLSKKLG GLGGKGTGSSNSGNPRAPMGGKVVGLAVAAVVVIWAASGFYTIKEAERGVVTRFGKFSHL VQPGLNWKPTFVDEVTPVNVESVRELAASGVMLTSDENVVRVEMNVQYRVTNPEEYLFNV TNADDSLRQATDSALRAVIGKYSMDKILTEGRTIIRTDTQKVLDETIKPYKMGLTVLDVN FQAARPPEEVRAAFDKAIAAREKEQQSIREAEGYVNKVQPEANGKAQRILEDAKAYKDKT ILEAQGDVGRLALLLPEYKASPQITRERLYLETMEHVLENSRKVLIDDKSNNLMVLPLDQ LMRGGKSGTTTTPSTDMDSASPAPSVTKPSSNVDLSGDSVMDQRRANAQRNDTNRQGGE >gi|316918327|gb|ADCU01000016.1| GENE 190 217563 - 218561 1144 332 aa, chain + ## HITS:1 COG:YPO0376 KEGG:ns NR:ns ## COG: YPO0376 COG0330 # Protein_GI_number: 16120711 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Yersinia pestis # 1 329 1 331 334 492 81.0 1e-139 MRKSLLLILIVILVVLYSSLFVVNEGQRGIILRFGKVVRDDENKPLVYAPGLHLKVPFIE SVKMLDARIQTMDNQADRFVTKEKKDLIIDSYIKWRISDFSRYYLATGGGDVLQAEVLLK RKFSDRLRSEIGRLDIKDIVTDSRGKLMEDVREALNTGSVDDAGSEADNAIANAAARVAR ETNGKQPEVNPNSMAALGIEVIDVRIKQINLPAEVSDAIYNRMRAEREAVALRYISQGRE EAEKLRATADYEVTRTLAEAERQGRITRGEGDAVAAKLFADAFSQDPDFFAFIRSLKAYE NSFKNGQDVMVLRPDSDFFKYMKSPNGNAAAK >gi|316918327|gb|ADCU01000016.1| GENE 191 218690 - 218890 116 66 aa, chain + ## HITS:1 COG:YPO0377 KEGG:ns NR:ns ## COG: YPO0377 COG3242 # Protein_GI_number: 16120712 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 65 1 65 66 70 75.0 8e-13 MNSTIWMALGLVLIVEGLGPMLFPRIWRRMIATMAQLPDGVLRRYGGGLVVAGLVIYYML RSRMGG >gi|316918327|gb|ADCU01000016.1| GENE 192 218989 - 220287 1439 432 aa, chain + ## HITS:1 COG:YPO0378 KEGG:ns NR:ns ## COG: YPO0378 COG0104 # Protein_GI_number: 16120713 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Yersinia pestis # 1 432 1 432 432 793 89.0 0 MGKNVVVLGTQWGDEGKGKVVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGI LRENVTSIIANGVVLAPDALMREMTELEARGIPVRERLLLSEACPLILPYHVALDNAREK ARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFNKETFAVKLKEIMEYHNFQLVNYYKVE AVDYQTVLDEVMAVADIITAMVVDVADLLNKAHKKGEFVMFEGAQGTLLDIDHGTYPYVT SSNTTAGGVATGSGVGPRCVDYVLGIVKAYSTRVGAGPFPTELFDEVGEFLCTKGNEFGA TTGRRRRTGWLDAVAVRRAVELNSLSGFCMTKLDVLDGLDEVKICVGYRMPDGREIDTTP LAAEGWEGIEPIYEVMPGWKETTFGVKEHSKLPQAALNYIKRVEEVTGVPVDIISTGPDR EETMILRDPFDA >gi|316918327|gb|ADCU01000016.1| GENE 193 220731 - 221108 273 125 aa, chain + ## HITS:1 COG:ECs5154 KEGG:ns NR:ns ## COG: ECs5154 COG1959 # Protein_GI_number: 15834408 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 125 17 141 141 207 81.0 4e-54 MASLPADQMTNITQVTDVYGVSRNHMVKIINQLSRAGFVTAVRGKNGGIRLGRAAKDIRI GDVVRELEPLTLVNCSHEFCHITTACRLKQVLQKATQAFLAELDQCTLADLIEENSPLYK LLLVE >gi|316918327|gb|ADCU01000016.1| GENE 194 221150 - 223702 1214 850 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 34 730 18 704 730 472 38 1e-132 MSQDPFQEREAEKYASPIPSREFILTHLSQHTTPVSREEIARELNLTSEEDLEALRRRLR AMERDGQLIFTRRQCYALPERLDLKKGTVIGHRDGYGFIRIEGSKDRDDLYLSSEQMKLC IHGDVVLAQVVGTDRKGRREARIVRVLEPKQSQIVGRYFTDAGVGFVVPDDSRLSFDILI PPDSIAGARMGYVVVVELTQRPTRRTKAVGKIVEVLGDNMGTSMAVDIALRTHEIPHTWP EQVEKQVADLSELVPEAAKKGRVDLRDLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVA IADVSYYVRPNTALDHEARSRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMT VSATGRLTSFKFYEAVMSSHARLTYTKVAHILAGDEELREHYRPLVKPLEELHNLYKVLD HAREVRGGIAFETEEAKFIFNAERRIERIEPTVRNDAHKLIEECMILANIAAARFVEKNE EPALYRIHDRPSDDHLTSLRSVLGELGLTLGGGMKPEPKDYADLMDEIADRPDHEMLQTM LLRSMKQAVYDPENRGHFGLALSAYAHFTSPIRRYPDLSLHRAIKYLLAKEHGGDHAGWT KTGGWHYNEEQMLQLGEHCSMTERRADEATRNVADWLKCDFMQDHVGETFTGIISSVTGF GFFVRLDDLFIDGLVHVSALDNDYYRFDNVGQRLIGESSGQTYRLGDKVEIRVDAVHMDE RKIDFVLLSSTRTPRGAGKTEKDRAKRTLREDKAPSRGSRRGGKMPANFEPDSAFRKDKD GKPARAGKAGTGKKDKSVKIDKSGKPAKPAKNAKDKDLTSTKPKAKKVSAKTKKIAAATK AKRAGKKAAE >gi|316918327|gb|ADCU01000016.1| GENE 195 223822 - 224556 463 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 3 243 7 246 255 182 39 1e-44 MSEMIYGIHAVQALLERDPQRFLEVFVMKGREDRRLMPLIAELEQMGIVIQVANRQWLDE KVEGAVHQGIIARVREGRQYQENDLPALLENLDKPPFLLILDGVTDPHNLGACLRSADAA GVHAVIVPRDRSAQLNATAKKVACGAAETVPLIRVTNLARTMRFLQEQNIWIVGTAGEAD HNLYQSKMTGPMALVMGAEGDGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV RQRG >gi|316918327|gb|ADCU01000016.1| GENE 196 224715 - 226349 954 544 aa, chain + ## HITS:1 COG:YPO0383 KEGG:ns NR:ns ## COG: YPO0383 COG1960 # Protein_GI_number: 16120717 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Yersinia pestis # 1 541 5 545 547 751 67.0 0 MTWQTHTVFNQPNPLSNSNLYLSDTPLQEAVVREQAGWDSALLSAVGLQLGSAESLELGR MANANPPELLRYDAAGRRVDEVRFHPSWHMLMQGLTENRVHNLPWQNNAVSGSFAARAAR FLLHSQIEAGTLCPITMTFGAIPLLQKCLPTSMNGWLMGLASNRYDPHSLPAEQKKGLLI GMGMTEKQGGSDVLTNTTQAIALEGQGSGKPYRIVGHKWFFSVPQSDAHLILAQASGGIS CFFVPRILPDGTRNAIRIERLKEKLGNRSNASAEVEFQDATGWLLGDEGDGVRLILQMGS ATRFDCALGSHGLMRRAFTVAFYHALQRQAFGKSLAEQPLMRQVFAKMTLRLEGQTSLLF RLCRSLEMPDVQGERLFGRLMTPAAKFAVCKQGIPFVAEAMEALGGIGYCEESELPRLYR EIPVNSIWEGSGNIMCLDVLRVWRKNPHMEEMLSLELADVKGQNVLLDKAWRNLLKRLHN PSEAEARIISDELFNINAAAQLLRFAPTEVAEAWCQQYHSSDGARVIDNRTQDLLLQRAM GLGC >gi|316918327|gb|ADCU01000016.1| GENE 197 226360 - 226635 306 91 aa, chain - ## HITS:1 COG:no KEGG:ETAE_0362 NR:ns ## KEGG: ETAE_0362 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 90 1 90 91 104 60.0 8e-22 MNRSPVLTTLLLSIGLISATAQSAENVNADLTTGLNQVGVISVQGVVGEPHDVERLIALK ADEQGASYYRILSMDENMPQHTWHVTAALYS >gi|316918327|gb|ADCU01000016.1| GENE 198 226808 - 227116 218 102 aa, chain - ## HITS:1 COG:no KEGG:ETAE_0363 NR:ns ## KEGG: ETAE_0363 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 18 102 18 103 103 102 63.0 3e-21 MKKIKLSLVILFTLFLTACGVMNSKPVPPPAPSSHAQEIRRDQTSTLTRMRTISAQVYGS PMNAQEVLQKQADEAGATYYYVIMVDETGVPGQWYAQAILYK >gi|316918327|gb|ADCU01000016.1| GENE 199 227296 - 228045 510 249 aa, chain + ## HITS:1 COG:yjfP KEGG:ns NR:ns ## COG: yjfP COG1073 # Protein_GI_number: 16132012 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli K12 # 1 249 1 249 249 236 46.0 4e-62 MIEMFDEVVDGLPVLHAAPAGKQGKPLPTLFFYHGFTSSKEVYSYFGYAFAKAGFRVILP EANLHGSRFNGDEAYRMAHFWNILRSNIDELPAIYQHYQRQGLILDDRVGVCGASLGGMT TLGAKMRYPWIRAAASFMGSGYFESLSQTLFPPFDVKTVEDRQRLSAELGFLAEYDVSHQ LEKLADKPLLIWHGLADDLVPAEESRRLIRDLAEHRLLEHIRFETEASIGHKITVSALDV GVQFFSRHL >gi|316918327|gb|ADCU01000016.1| GENE 200 228194 - 228469 329 91 aa, chain - ## HITS:1 COG:no KEGG:ETAE_0365 NR:ns ## KEGG: ETAE_0365 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 90 1 88 89 75 50.0 4e-13 MKSIIALVTTLTLFAATNALAATEITGRQANSLIANQYAVVSVNHDVQNVQEALPQLQQE AVAQGAKYYQVIVMHEPESNGQMHVSAALFR >gi|316918327|gb|ADCU01000016.1| GENE 201 228846 - 229244 681 132 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157368693|ref|YP_001476682.1| 30S ribosomal protein S6 [Serratia proteamaculans 568] # 1 132 1 132 132 266 99 6e-70 MRHYEIVFMVHPDQSEQVPGMIERYSATITNAAGQIHRLEDWGRRQLAYPINKLHKAHYV LLNVEAPQEAIDELETNFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRGDRREDFANE TADDADAGDSEE >gi|316918327|gb|ADCU01000016.1| GENE 202 229253 - 229570 148 105 aa, chain + ## HITS:1 COG:YPO3538 KEGG:ns NR:ns ## COG: YPO3538 COG2965 # Protein_GI_number: 16123684 # Func_class: L Replication, recombination and repair # Function: Primosomal replication protein N # Organism: Yersinia pestis # 1 105 2 106 106 172 81.0 1e-43 MTSNRLVLTGTVCKVPIRKVSPSGIPHCQFVLEHRSIQQEAGFSRQAWCRMPVIVSGQAF QATTHRLTVGSMLTVQGFISSHQGRNGLTKLVLHAEQIELIDSGD >gi|316918327|gb|ADCU01000016.1| GENE 203 229575 - 229802 385 75 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. Sakai] # 1 75 1 75 75 152 100 1e-35 MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIK RARYLSLLPYTDRHQ >gi|316918327|gb|ADCU01000016.1| GENE 204 229842 - 230291 702 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238787556|ref|ZP_04631354.1| 50S ribosomal protein L9 [Yersinia frederiksenii ATCC 33641] # 1 149 1 149 150 275 94 2e-72 MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAD VLAAAEARAAKINELGAVTIASKAGDEGKLFGSIGTRDIADAITAAGVQVAKSEVRLPNG VLRTVGDHEVHFQVHSDVFAQLNVVVVAE >gi|316918327|gb|ADCU01000016.1| GENE 205 230422 - 230784 254 120 aa, chain + ## HITS:1 COG:SSO1867 KEGG:ns NR:ns ## COG: SSO1867 COG3189 # Protein_GI_number: 15898659 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sulfolobus solfataricus # 4 118 1 112 115 89 43.0 2e-18 MSAVIHVARVYDAHPPYPANTFLTDRLWPRGISKARLEGVEWLKTVAPSSDLRHAFHEQR VSWDEFGVLYRAELDANDARDALLAILKRGEPLTLLYGSRDEQHNQAIVLREYLLERVKS >gi|316918327|gb|ADCU01000016.1| GENE 206 230781 - 231419 522 212 aa, chain - ## HITS:1 COG:YPO3533 KEGG:ns NR:ns ## COG: YPO3533 COG3061 # Protein_GI_number: 16123679 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell envelope opacity-associated protein A # Organism: Yersinia pestis # 1 210 18 244 246 171 48.0 1e-42 MLRTWLNLRQRNSPALLEPQDQETERPMSSKLSDKLKVVTQHLYNLWHMPDRFDWMEPLP PFHRRWVIVATVVLLLSLLWPYSDPQDLRYSPEPQQENEVPMQAGMDNNDAPPPPRVENT RQAEQNGWQEYHIQAGQTLAQLFRDNQLNVNDVFAMAQVEGNDKPLSNLKAGQDVEIQHN AQGQVIALKIKTISNEQIEFRREADGSFRRIR >gi|316918327|gb|ADCU01000016.1| GENE 207 231718 - 232338 835 206 aa, chain + ## HITS:1 COG:YPO3532 KEGG:ns NR:ns ## COG: YPO3532 COG0545 # Protein_GI_number: 16123678 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Yersinia pestis # 1 206 1 206 206 334 80.0 8e-92 MSTPSFDSIEAQASYGIGLQVGQQLNESGLEGLQPEALLAGLRDAMEGNAPAVPVEAVHR ALREIHERADAVRREQQKGLAEAGQKFLEENAKNDDVTVTESGLQFKVLEKGEGTIPARQ DQVRVHYTGRLVDGTVFDSSVERGQPAEFPVNGVIPGWIEALTMMPVGSKWQLYIPHNLA YGERGAGAAIPPYSALVFDVELLEIL >gi|316918327|gb|ADCU01000016.1| GENE 208 232636 - 233307 741 223 aa, chain - ## HITS:1 COG:YPO3531 KEGG:ns NR:ns ## COG: YPO3531 COG2846 # Protein_GI_number: 16123677 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Regulator of cell morphogenesis and NO signaling # Organism: Yersinia pestis # 1 223 1 221 221 313 68.0 2e-85 MALRDLSLGELAITIPRATLLFRQHDMDFCCGGKQTLLRVATKKNLNVDELEAALENLKN ELNNETAHNWRNTPLAEITPFIVKRYHDRHREQLPELILMAEKVERVHAEKPACPKGLAK QLNLIYQDLSQHMMKEERILFPLIEQGMGAQAGGPISVMESEHDEAGEQLEVIKFLTNNV VPPEGACNTWQALYAGINEFISDLMEHISLENNLLFPRALRGE >gi|316918327|gb|ADCU01000016.1| GENE 209 233438 - 234241 552 267 aa, chain + ## HITS:1 COG:SMc01228 KEGG:ns NR:ns ## COG: SMc01228 COG3570 # Protein_GI_number: 15965316 # Func_class: V Defense mechanisms # Function: Streptomycin 6-kinase # Organism: Sinorhizobium meliloti # 1 265 1 262 264 239 48.0 4e-63 MFTHWLTLWNLQVDGELIKTHNAQLLPVLCDGAPLMLKLAGVEEERRGAELMQWWNGDGA AQVVARQDDALLMERACGTKNLMSMVKDGQDDEASEIICRVISRLHRARTYQAPPLETLS QRFGALRNAVLQSHDPLLSLCGVMAEQLLSDPLEEVVLHGDIHHGNILNFEARGWLAIDP KGLYGERGYDYANLFCNPELSIATKRPRFLRRLEVVTQTAKIEKQRLLMWIMAHAGLSAA WFLEDDDLDLFAGRMAIAKLAADEMGC >gi|316918327|gb|ADCU01000016.1| GENE 210 234274 - 236223 2008 649 aa, chain - ## HITS:1 COG:YPO3530 KEGG:ns NR:ns ## COG: YPO3530 COG0737 # Protein_GI_number: 16123676 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Yersinia pestis # 1 649 5 655 656 1052 78.0 0 MSARPFSYSLVALLIAGSVQAATVDLRILETSDLHSNMMDFDYYKDQPTEKFGLVRTASL INDARHEATNSVLVDNGDLIQGSPLGDYMASKGLEKGEVHPVYKAMNTLDYTVGNIGNHE FNYGLDYLKKAQAGAKFPYINANVVDAKTGEPIWKPYLIAEKQVKDRDGKMHTLRIGYIG FVPPQIMTWDKANLAGKVKVNDITETARKYVPKMKKEGADLIVAIPHSGLSSLPYQVMAE NSVYYLSQVPDINAIMFGHSHAVFPSKDFADIKGVNLDKGTLNGIPAVMPGQWGDHLGLV DLVINNDQGKWTVEDAKAQARPIYDLANKQSLAAEDASLIKVLKEDHKGTRDFVSQPIGK SNGNMYSYLALIQDDPTVQIVNNAQRAYVEHYIQGDPDLADIPVLSAAAPFKVGGRKNDP ASYVEVEKGQLTFRNAADLYLYPNTLVVVKASGADVKEWLECSAGQYNQIDVNSNKPQEL INWDGFRTYNFDIIDGVNYQVDVSQPARYDGECTLINPKSERIKDLTFNGKPIDPNAQFL IATNNYRAYGGKFAGTGDQHIAFASPDENRAVLADYIRAETKKHGAVTPQVDNNWRLAKI SSQTPLDIRFETSPSEKASKFITENAQYPLTNKGQDNLGFALYQINLQK >gi|316918327|gb|ADCU01000016.1| GENE 211 236474 - 237214 629 246 aa, chain + ## HITS:1 COG:YPO3529 KEGG:ns NR:ns ## COG: YPO3529 COG1218 # Protein_GI_number: 16123675 # Func_class: P Inorganic ion transport and metabolism # Function: 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase # Organism: Yersinia pestis # 1 246 2 247 247 391 79.0 1e-109 MLEQISRLAREAGEAIMAVYQDDKPLNVEHKSDDSPVTAADLAAHRVIRDGLLQLTPDIP LLSEEDPPSWDIRQHWQRYWLVDPLDGTKEFINRNGEFTVNIALIENGIPVMGVVYAPVN DVLYSAEHDKAWKEEKGVREQIHVSNAIPPLVVVSRSHADDELRDYLAQLGDHQTVAVGS SLKFCLVAEGKAQLYPRFGPTNIWDTAAGHAVARAAGAKIHDWQGKTLDYTPAESFLNPG FRVSIF >gi|316918327|gb|ADCU01000016.1| GENE 212 237220 - 237777 445 185 aa, chain - ## HITS:1 COG:STM4405 KEGG:ns NR:ns ## COG: STM4405 COG3054 # Protein_GI_number: 16767651 # Func_class: R General function prediction only # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 183 1 183 185 246 67.0 2e-65 MKLQKHYLLPLLLLSMSVSAHNFQQNQRVAPVGISDRGELNYQNNEFSYKNWNSAQLGGK VRVIQHIAGRTSAKDMNDPLIEAIKKAGLPHDKYQTTTIVNTDDAIIGTGPFVRSSIESS KKEFPWSQFIVDDTGAAKKAWDLQPKGSAIVVLDKQGNVKFAKDGALTPQEVQQVIALLH QLLGS >gi|316918327|gb|ADCU01000016.1| GENE 213 238109 - 238315 286 68 aa, chain + ## HITS:1 COG:no KEGG:ETAE_0374 NR:ns ## KEGG: ETAE_0374 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 68 1 68 68 111 89.0 6e-24 MKIFQRYNPLLVAKYVKTLFRGRLYIKDVGAFEFDMGKVLPPKVRDKRHLSAMSEINRQV TRLQAEMA >gi|316918327|gb|ADCU01000016.1| GENE 214 238435 - 239676 1307 413 aa, chain - ## HITS:1 COG:YPO3526 KEGG:ns NR:ns ## COG: YPO3526 COG1253 # Protein_GI_number: 16123672 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Yersinia pestis # 1 401 36 436 443 708 86.0 0 MADEGDINASRVIALQEQPGYFFTVVQIGLNAVAILGGIVGDAAFSPTFRILFDRFMSPE ISEQVSFVCSFVLVTSCFILFADLTPKRIGMIAPETVAVRIVNPMRFCLLIFRPLVWFFN GLANMIFRLFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHEIIENVFELESRTVPSS MTPRESIIYFDLSESEESIKEKVSTHPHSKFLVCDGAIDHVVGYVDSKDLLNRVLGNQSL VLSSGVQIRNVLIIPDTLTLSEGLESFKTAGEDFAIILNEYALVVGIITLNDVMTTLMGD LVGQGQEEQIIARDENSWLVEGVTPIDDVMRVLDIEEFPQNSNYETIGGFMMYMLRKIPK RTDYVKYAGYKFEVVDIDSYKIDQLLVTRLTERPAPIIPDAAGDLEKAKEANP >gi|316918327|gb|ADCU01000016.1| GENE 215 240035 - 240676 568 213 aa, chain - ## HITS:1 COG:YPO3525 KEGG:ns NR:ns ## COG: YPO3525 COG0225 # Protein_GI_number: 16123671 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Yersinia pestis # 5 213 4 212 212 318 70.0 6e-87 MANTIHHTQTLTAEQALPGRNTPMPIAKTHAVNGHSMTEVPEGMETAIFAMGCFWGVERL FWQQQGVYSTAAGYSGGFTPNPTYREVCSGQTGHAEAVRIVFDPKIISYAKLLELFWENH DPAQGDRQGNDIGSQYRSAIFVLTPQQQAEALTSEARFQKAMREANDSREITTEISAAKP FYYAEDEHQQYLYKNPHGYCGLGGIGVCLPPQL >gi|316918327|gb|ADCU01000016.1| GENE 216 240927 - 242663 1208 578 aa, chain + ## HITS:1 COG:YPO3524 KEGG:ns NR:ns ## COG: YPO3524 COG0729 # Protein_GI_number: 16123670 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Yersinia pestis # 1 578 1 578 578 889 72.0 0 MPRFRVFGFICLFLASPLANAAQVRLKVEGLSGSLEQNVRASLSTIESDEVSNDGRFRAR VDESIRRGLKALGYYQPTIEFDFQDRKPPERPLLIAKVKAGEPVLIAGVDVKIQGQAKDD EAYKELLKTGEPKIGTVLNHGTYDSFKNSLTSIALRRGYFDATMPVHQLGVIEDERKAFW DIDFDSGKRYRFGDVTFEGSQIREEYLRNLVPFKQGEYYTSEELAEFSRRLSATNWFNSV VVSPDFKQVTPEKELPLDAVLSPKVRNTVELGGGYATDVGPRVQATWKRPWVNSYGHSFE TSLNLSAPEQTADFSYKIPLLKNPIEQYYLLQGGFKRTDLNDTEEDTTTLNVARYWDLSS GWQRSVNLRWSLNHFTQGEVTNNTMLLYPGIMLNRTRSRGGLMPVWGDSQRYSFDVSDTT WGSDVDFAVVQAQQVWIRTLAEKHRFVVRGNVGWIETNDFEKVPPNLRFFAGGDRSIRGY KYKSISPEDSSGKLTGASKLATGSLEYQYNVTGKWWGATFVDSGEAVNDIKRSNFYTGAG VGVRWESPVGPIKLDFAVPVGDKDNHDLQFYIGLGPEL >gi|316918327|gb|ADCU01000016.1| GENE 217 242660 - 246589 3415 1309 aa, chain + ## HITS:1 COG:YPO3523 KEGG:ns NR:ns ## COG: YPO3523 COG2911 # Protein_GI_number: 16123669 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 1308 1 1305 1305 1700 65.0 0 MRRIIKFSLIFLLVVVLLVVGLIGTVISTPGLHFVINSAARWVPGLDIAGVTGGWRNLTL TGVSYQMPGVKVKAGEFHLAVDVGCLKKSELCLNALTANQIDVAINTQELAPSEPAPEET NSEPLTELKAPYPVAIRLLRINNVHVTVDDTAISLDEFRTGAEWRDRGLTLLPTHIQSLL VALPKTPATPVQDQVVAVAIKDKPVTQAAMDAASESAKQAASDAAEHVAKQVVKPEQAKA DAQKEVQAEAEKAAPEKPLGEVLAELFAKPLLPDLPELRLPLDLTVKRISGDQLRVTGDS DIVVNTLLVRAVTKDSALRLHTLEVRSPQGNVSMHGQATLSDQWPMDFRLNADLNVDPVK GEKLKLGIKGNLRDVLTLDANLSGPLKATLAAETQLAKAGLPLALTLESPGVQWPLTGAS EYQAKNIRVRLNGSGKAYALSMRTDVSGNEIPAAKITLDGKGTDQQFNLNRLRVAALQGN TDLSALVDWSKAISWKSKLTLDGINTAKQWPEWPAKLNGKIETQGSLYGGNWQLRVPVLQ LAGNVKQNQVDVRGNLTGNQAGQWKIPEMHIGLGRNKIDITGELSDKWALDAVIDAPRLD GNLPGLAGTAKGTLKLRGNLKAPQVLADLTASGLQWQTLTINRVKLDGDVRSAEQIEGNL NVRVEQLKQDDFLISLLTLDAKGSEKQHQLQLKINGDPISGQLALKGSFDRATERWQGTL NDTRFDTPVGEWRLTRPIALDYLNAQQKISVGPHCWLNPNAEVCVPKTIEAGASGNASVV LNRFDLAMIKPFLGPDTALNGVFTGRADVSWKEGEALPEAKVTLSGKGVKVQQVVQGNPL PIAFDTLNLNAALNHGRAQLDWLIKIAGNGQLDGNVQVADPQGRRNLSGNVNIKNISLAM LNPALMSGEKAQGMLNAALRLGGNAQQPQIYGRMALDKVDIDGQFMPFDITDGNLAVNFE GMSSALQGVIKTSRGQLNLTGNADWRVIDAWRAQIAVKGDRVRVTVPPMVRLDVSPDIVF EATPKMFALNGSVAIPWARITVQELPESAVSVSSDEVMLNNDRQPIKPATASIPINSNLN ISIGPNVRLDAFGLKARLQGDLKMVQDEHGLGLNGQVNIPEGRFAAYGQDLLIRKGELIF SGPPEQPLLNIEAIRNPDATEDDVTAGVRVTGLADQPKLEVFSDPAMSQQMALSYLLRGQ GLESSGTDSNAMTSMLIGMGVAQSGKLVGKIGETFGVSNLSLDAQGVGDSSQVVVSGYVL PGLQVKYGVGIFDSLATLTLRYRLMPKLYLEAVSGLDQALDLLYQFEFE >gi|316918327|gb|ADCU01000016.1| GENE 218 246589 - 246942 353 117 aa, chain + ## HITS:1 COG:YPO3522 KEGG:ns NR:ns ## COG: YPO3522 COG2105 # Protein_GI_number: 16123668 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 117 1 117 118 194 78.0 3e-50 MRIIVYGSLRRKQGNSHWMTNAMLLGEHELEGYEMYDLGHYPAVVPGEGKVFCEVYRITS SILAELDDLKSNSKDYRRELIKTPFGSAWIYIYLYSVEGLPRIKCGDWLKRGQECDE >gi|316918327|gb|ADCU01000016.1| GENE 219 247018 - 247548 600 176 aa, chain - ## HITS:1 COG:ECs5204 KEGG:ns NR:ns ## COG: ECs5204 COG0221 # Protein_GI_number: 15834458 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 340 94.0 8e-94 MSLINVPAGKDLPEDIYVVIEIPANADPIKYEVDKETGCLFVDRFMSTAMFYPCNYGYIN HTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKMTKEYDH VKDVNDLPELLRAQISHFFEHYKDLEKGKWVKVEGWDNAEAAKAEIVASFERAKNK >gi|316918327|gb|ADCU01000016.1| GENE 220 247696 - 248700 948 334 aa, chain - ## HITS:1 COG:YPO3520 KEGG:ns NR:ns ## COG: YPO3520 COG0158 # Protein_GI_number: 16123666 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase # Organism: Yersinia pestis # 1 333 1 333 337 614 90.0 1e-176 MKTLGEFIVEKQQDFPHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGE VQMKLDLYANEKLKAALKARGEVAGIASEEEDDIVIFEGDRANNGKYVVLMDPLDGSSNI DVNVSVGTIFSIYRRITPIGQPVTEEDFLQPGNRQVAAGYVVYGSSTMLVYTTGNGVHAF TYDPSLGVFCLSHERVRFPEKGNMYSINEGNYIKFPLGVKKYIKYCQEQDEATQRPYTSR YIGSLVADFHRNLLKGGIYIYPSTASHPSGKLRLLYECNPMAFLAEQAGGKATDGFRRIL DIAPEKLHQRAPFFVGTSSMVEDAERFMSDFPDA >gi|316918327|gb|ADCU01000016.1| GENE 221 248869 - 250248 1303 459 aa, chain + ## HITS:1 COG:YPO3519 KEGG:ns NR:ns ## COG: YPO3519 COG0773 # Protein_GI_number: 16123665 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Yersinia pestis # 1 454 1 454 460 824 85.0 0 MRIHILGICGTFMGGLALLARTLGHEVTGSDANVYPPMSTLLEKEGITLMEGYDPSHLDP APDLVIIGNAMTRGNPCVEMILEQGIPYVSGPQWLHDEVLRHRWVIAVAGTHGKTTTAGM VTWILEECGYEPGFVIGGVPGNFDVSARMGNSPFFVIEADEYDCAFFDKRSKFVHYCPRT LILNNLEFDHADIFDDLKAIQKQFHHLVRLVPGKGRIISPASDANLKQVMAMGCWSEQEL SGEDGTWNARKLNPDASYFEVLLDGDVVGEVNWGLVGEHNMHNGLMAIAAARHVGVLPAD ACRALDSFINARRRLELRGEAFGVKVYDDFAHHPTAILATLSALRSKVGGTARILAVLEP RSNTMKMGVSKNDLAPALGRADEVFLFQPHHIPWLVTEVAEACVQPAHWSADIDVLVDMI AKTAQPGDYILVMSNGGFEGIHSKLLKALEHKQEISEQE >gi|316918327|gb|ADCU01000016.1| GENE 222 250443 - 250706 379 87 aa, chain - ## HITS:1 COG:no KEGG:Spro_0467 NR:ns ## KEGG: Spro_0467 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 87 1 87 87 94 68.0 1e-18 MKIKTTVAALGLLSMVSFGAFAAQSISAEQASSMQSLGTITTSGIDGSPSDIKAQLSDKA DAKGATAYHIIEARIDGNYHATAEIYR >gi|316918327|gb|ADCU01000016.1| GENE 223 250591 - 250851 73 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPNDCIEEACSALMDCAANAPKETIERRPKAATVVLIFMIIFLFYFCRSTSILDSMTIFF LVTAVVNDFDWRSFMLRLAGEAESYL >gi|316918327|gb|ADCU01000016.1| GENE 224 250842 - 251105 337 87 aa, chain - ## HITS:1 COG:no KEGG:YE0412 NR:ns ## KEGG: YE0412 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 87 1 87 87 93 65.0 2e-18 MKIKTSIAALAILSSLSFGAFAAQLVDNAQASNMQPIGTISVSGVSAAPSDIRAALSAKA DAQGATAYRVVEARNEGSFHATAEIYK >gi|316918327|gb|ADCU01000016.1| GENE 225 251535 - 252005 354 156 aa, chain - ## HITS:1 COG:YPO3517 KEGG:ns NR:ns ## COG: YPO3517 COG1438 # Protein_GI_number: 16123663 # Func_class: K Transcription # Function: Arginine repressor # Organism: Yersinia pestis # 1 156 1 156 156 276 91.0 9e-75 MRTPTKQEDLIKAFKALLKEEKFSSQGEIVQALQDEGFENINQSKVSRMLTKFGAVRTRN AKMEMVYCLPAELGVPTTSSPLKNLVLDVDYNDSVVVIHTSPGAAQLIARLLDSLGKSEG ILGTIAGDDTIFTTPAKGFSVEQLHDAILSLFDQEL >gi|316918327|gb|ADCU01000016.1| GENE 226 252473 - 253411 1137 312 aa, chain + ## HITS:1 COG:YPO3516 KEGG:ns NR:ns ## COG: YPO3516 COG0039 # Protein_GI_number: 16123662 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Yersinia pestis # 1 312 1 312 312 523 89.0 1e-148 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG EDARPALEGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLIEQVASTCPKACIGIITNP VNTTVAIAAEVLKKAGVYNKDKLFGISTLDVIRSNTFVAELKGKNPAEVEVPVIGGHSGV TILPLLSQIPGVTFSEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR AMQGESNVVECAYVEGDGKYARFFAQPLLLGKEGIVERKSIGSLSAFEQKALEGMLEVLH KDIELGENFVNK >gi|316918327|gb|ADCU01000016.1| GENE 227 253475 - 253774 176 99 aa, chain - ## HITS:1 COG:STM3306 KEGG:ns NR:ns ## COG: STM3306 COG3423 # Protein_GI_number: 16766601 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 9 93 7 91 95 106 64.0 9e-24 MTESQCHEDWHHADIIAALHKRKITLSGLSRASGLSSTTLSNALTRPWPKGEFIIAQALG IHPSEIWPSRYYDVATHQPIDRQLLMRARRSNKNKTADD >gi|316918327|gb|ADCU01000016.1| GENE 228 253984 - 254955 893 323 aa, chain - ## HITS:1 COG:STM3305 KEGG:ns NR:ns ## COG: STM3305 COG0142 # Protein_GI_number: 16766600 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Salmonella typhimurium LT2 # 1 321 1 321 323 521 84.0 1e-148 MNLEQITELTAQDMADVNATILQQLNSEVSLINQLGYYIISGGGKRIRPMIAVLSARALN YTGDKHITVAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRSF QMMTSLQSLRVLELMSEATNVIAEGEVLQLMNVNDPNITEENYMRVIYSKTARLFEAAAQ SSAILAGATHEQEIALQDYGRYLGTAFQLIDDLLDYDADGKTLGKNTGDDLNEGKPTLPL LHAMQNGSPERSAMIRKAIEEGNGRHLLEPVLETMHEVGSLTYTRQRAEEEADKAISALD VLPESPYKEALIGLANMAVDRKF >gi|316918327|gb|ADCU01000016.1| GENE 229 255215 - 255526 507 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157368720|ref|YP_001476709.1| 50S ribosomal protein L21 [Serratia proteamaculans 568] # 1 103 1 103 103 199 92 9e-50 MYAVFQSGGKQHRVSEGQTIRLEKLDIATGETVEFDQILMVANGEDIKIGVPFVSGGKVK AEIVAHGRGEKVTIVKFRRRKHHRKQQGHRQWFTDVKITGISA >gi|316918327|gb|ADCU01000016.1| GENE 230 255545 - 255802 427 85 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|152972109|ref|YP_001337255.1| 50S ribosomal protein L27 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] # 1 85 1 85 85 169 97 2e-40 MAHKKAGGSTRNGRDSEAKRLGVKRFGGEAVLAGSIIVRQRGTKFHAGNNVGCGRDHTLF ALADGKVKFEVKGPKNRKFISIVAE >gi|316918327|gb|ADCU01000016.1| GENE 231 255892 - 256833 588 313 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|241758620|ref|ZP_04756734.1| 50S ribosomal protein L27 [Neisseria flavescens SK114] # 9 304 8 302 311 231 41 3e-59 MESNQNVRVGICLALTTAIFWGALPIAMKQVLQVMEPYTIVWYRFLIASVGLFFILYSRK QLPPMRVFKHRRWLVLLIIATFGLLGNFVLFSSSLQYLSPTASQVIGQLSPVGMMFASVL ILKEKMRITQVIGACMLITGLLLFFNVSLKEIFTQLTAYTLGVILGVGAATVWVSYGVAQ KVLLRRLASQQILWLLYTLCAICLFPLAKPAVIFQLDGWQLACLIFCGANTLIGYGALAE AMARWQAAQVSAVVTLTPLFTLMFSDLLALVWPDLFLSPSLNTVGYIGAFVVVAGAMFSA VGHRWWPRRAEQN >gi|316918327|gb|ADCU01000016.1| GENE 232 256900 - 258078 814 392 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 [Roseobacter sp. AzwK-3b] # 1 321 1 315 345 318 52 2e-85 MKFVDEAAIHIEAGDGGNGCVSFRREKYIPRGGPDGGDGGDGGDVYLLADENLNTLIDYR FEKSFRAERGQNGQSRDCTGKRGNDITIKVPVGTRVVDLDTGEVLGDMTRHAQKLMVGKG GWHGLGNTRFKSSVNRAPRQKTMGTKGDKRDLKLELLLLADVGMLGLPNAGKSTFIRAVS AAKPKVADYPFTTLVPSLGVVRMDHEKSFVVADIPGLIEGASEGAGLGIRFLKHLERCRV LLHLIDLAPIDESDPIENAKVIINELGQYSEKLSQKPRWLVFNKIDILDPEEAKQRAQAI ADALGWEDKHYLISAANREGVNALCWDVMHFLDTQPRDAEVEEEKEKAKKAEFMWDDYHR EQLEQAEAEADEDWDDDWDEDDDEGVEIIYQK >gi|316918327|gb|ADCU01000016.1| GENE 233 258183 - 259226 729 347 aa, chain - ## HITS:1 COG:YPO3508 KEGG:ns NR:ns ## COG: YPO3508 COG0642 # Protein_GI_number: 16123654 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 8 340 18 348 355 430 68.0 1e-120 MLALILLITQLASALWLWHESREQISFLVNETLSARARDAHVEKEIREAIASLLVPSLVM MSFTLILSAIAISWIIRPLNKLQQRLDKRSADNLTPITLDSNMLEIAAVTGTLNQLFSRL SHTIQQERLFTADAAHELRTPLAGIRLHLELLEQSGVSEARALVTRIDQLMHTVEQLLML SRAGQNFASGHYQSIDISKDVIPPLEVELVEMLKLRNQRLEIDIPARAEVLGDAVLIRLM LRNLVENAHRYSPENSTIRIVALCNEKGVELRVIDQGPGIDESKAGELTQAFRRMDQRYG GSGLGLNIIIRIIQLHQGKLTLKNVDSAAGSGLIASCWLPHNVLAKF >gi|316918327|gb|ADCU01000016.1| GENE 234 259253 - 259915 693 220 aa, chain - ## HITS:1 COG:YPO3507 KEGG:ns NR:ns ## COG: YPO3507 COG0745 # Protein_GI_number: 16123653 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Yersinia pestis # 1 218 1 218 220 313 75.0 2e-85 MKILIVEDDELIQQGLAKALGNESYACDCASTAAQAKSLQQVGQYSLIILDLGLPDLDGA SLLRQWRRSGVDVPVLVLTARDAIEDRVEGLDAGADDYLVKPFALVELQARVRALIRRFQ GHSDNLLQVENIILNLSTQQVLFDGSQIELTPKEFALLSRLMMRAGQTVNREILQQDLYS WQDDLSSNTLEVHIHNLRRKLGKERIKTVRSVGYRLESQL >gi|316918327|gb|ADCU01000016.1| GENE 235 259961 - 261430 823 489 aa, chain - ## HITS:1 COG:YPO3506 KEGG:ns NR:ns ## COG: YPO3506 COG2027 # Protein_GI_number: 16123652 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Yersinia pestis # 13 489 1 482 482 800 81.0 0 MTVTLLCSYPGIMQFSRIISGLACALAFSTQAAPVQDYTQYLPDGANLALLVQKIGSPTP AIDFHGQQMALPASTQKVITALAALLQLGPDYRFSTTMETRGSISDGKLKGDLIVRFGGD PTLRRQHIRNMVTALKKQGINEITGDILIDTSVFASHDKAPGWPWNDMTQCFSAPPAAAI VDRNCFSISLYSAPKAGDNAFIRVASYYPVHMFSEVRTLAKGSPDAQYCELDVVPGELNR FTVTGCLTQRSEPLPLAFAIQDGASYAGAIVKDELRQAEIQIDGNLRRQTTPNTAATILA QTQSAPLSSLLHTMLKKSDNMIADTIFRTIGHERLGVPGTWRAGADSVRQILRQKAGINL GNTILVDGSGLSRHNLISPATMMQVLQYIAQNDQQLNIISMLPLAGHDGTLQYRGGLHEA GVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVPPQDQKIRRAPLVRFESR LYRDIYQNN >gi|316918327|gb|ADCU01000016.1| GENE 236 261673 - 262149 548 158 aa, chain + ## HITS:1 COG:YPO3505 KEGG:ns NR:ns ## COG: YPO3505 COG0782 # Protein_GI_number: 16123651 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Yersinia pestis # 1 158 1 158 158 248 82.0 2e-66 MNQIPMTLRGAEKLREELEYLKGTRRPQIIADIADAREHGDLKENAEYHAAREQQGFCEG RIQEIEAKLSNANVIDVTKIPNTGRVIFGCTVSVENLDTEDKQTYSIVGDDEADFKQNRI SVNSPIARGLIGKEQGDIVVIKTPGGEVEFEILKVEYI >gi|316918327|gb|ADCU01000016.1| GENE 237 262289 - 262582 428 97 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|22124594|ref|NP_668017.1| hypothetical protein y0680 [Yersinia pestis KIM] # 1 97 1 97 97 169 86 1e-40 MNLNNKQKQHLKSLAHPLKPVVQLGNNGLTEGVLAEIEQALAHHELIKVKIAAEERDTKT LIADAIVRETGACQVQLIGNVLVIYRPSQERKISLPR >gi|316918327|gb|ADCU01000016.1| GENE 238 262723 - 263349 571 208 aa, chain + ## HITS:1 COG:ECs4058 KEGG:ns NR:ns ## COG: ECs4058 COG0293 # Protein_GI_number: 15833312 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 23S rRNA methylase # Organism: Escherichia coli O157:H7 # 2 207 3 208 209 370 88.0 1e-103 MGKKRSASSNRWMHEHFSDKYVIQAQKKGLRSRAWFKLDEIQSTDKLFKPGMTVVDLGAA PGGWSQYVVTQIGNSGRVIACDILPMDPIVGVDFLQGDFRDELVLKALTDRVGEDKVQVV MSDMAPNMSGTPSVDIPRSMYLVELALEMAKDVLAPGGSFLVKVFQGEGFDEYLTQIRSL FTKVKIRKPDASRARSREVYIVATGRKL >gi|316918327|gb|ADCU01000016.1| GENE 239 263397 - 265352 1694 651 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 1 642 1 635 636 657 53 0.0 MSDMAKNLILWLVIAVVLMSVFQSFGPSESNSRRVDYSTFLTEVNQDQVREVRINGREIN VTKKDSGKYTTYIPVNDPKLLDSLLTKNVKVVGEPPEEPSFLATIFISWFPMLLLIGVWI FFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLRDPSRF QKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMF EQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDASVIARGTPGFS GADLANLVNEAALFAARTNKRVVSMVEFEKAKDKIMMGAERRSMVMTEEQKESTAYHEAG HAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPQGDAISYSRQKLESMISVAYGGRLAEE LIYGVENVSTGASQDIKQATTIARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVSKTKHM SDETARIIDQEVKALIERNYARTRQLLEENMDIMHAMKDALMKYETIDAPQVDDLMARRE VRPPAGWEEDQNNRSDNNGGAPQAPVNKPAEEQLNTPSSDDNITTGNTGEK >gi|316918327|gb|ADCU01000016.1| GENE 240 265463 - 266296 719 277 aa, chain + ## HITS:1 COG:ECs4056 KEGG:ns NR:ns ## COG: ECs4056 COG0294 # Protein_GI_number: 15833310 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Escherichia coli O157:H7 # 1 276 16 291 297 424 77.0 1e-119 MQLKAQGLTLDLTYPQVMGILNVTPDSFSDGGKHNGRDAALRHAEAMISAGATIIDVGGE STRPGAAEVSTEEELDRVVPTVELIARYFDVWISVDTSKAEVITASANAGATLINDIRSL SEPGALEAAAQSGLPVCLMHMQGDPKTMQHKPVYTDVVAEVDSYLASQIERCMAAGIDKS RLLLDPGFGFGKNLEHNYQLLAHLAHFHHFGLPLLVGMSRKSMVGQLLKVGPTQRVAGSL ACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAKG >gi|316918327|gb|ADCU01000016.1| GENE 241 266304 - 267641 1337 445 aa, chain + ## HITS:1 COG:YPO3500 KEGG:ns NR:ns ## COG: YPO3500 COG1109 # Protein_GI_number: 16123646 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Yersinia pestis # 1 445 1 446 446 756 87.0 0 MSERKYFGTDGIRGKVGDCPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLES ALEAGLAAAGLSASFTGPMPTPAVAYLTRTFRAEAGIVISASHNPYYDNGIKFFSIDGTK LPDEVEEAIEAEMEKPLTCVESAELGKANRIVDAAGRYIEFCKSTFPTELSLSSLKIVVD CANGATYHIAPSVLRELGATVIAIGCEPDGMNINKECGATDVRQLQARVLAEKADVGLAF DGDGDRVMMVDHLGNKVDGDQILYLTARENLRQGNLRGGAVGTLMSNMGLELALKQLGIP FARAKVGDRYVLEMMAAKGWRLGAENSGHVIILDKTTTGDGIVAGLQVLAAIVRNHMTLH DLCSGMKLLPQVLVNVRFSGNHDPLQAESVKAVTAQVEAQLNGRGRVLLRKSGTEPLIRV MVEGEDDAQVTEMANRIADAVKAAG >gi|316918327|gb|ADCU01000016.1| GENE 242 267592 - 267918 65 108 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MATKPIDTSRKITKRASYIVVPVFLAGFPQPKASTIKADENKSTEAGVNTTQCCQAVQEQ FMMRSSIEEKTSKTLSFTGFSSHNPMRFYCTALIQPLLLRRQYDLPFL >gi|316918327|gb|ADCU01000016.1| GENE 243 267863 - 268198 296 111 aa, chain + ## HITS:1 COG:YPO3499 KEGG:ns NR:ns ## COG: YPO3499 COG1314 # Protein_GI_number: 16123645 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Yersinia pestis # 1 111 1 111 111 160 81.0 4e-40 MYEALLVIFLLVSIGLVAMVMLQQGKGADMGASFGAGASATLFGSNGSGNFMTRTTAVLA TLFFVLSLVLGNLSGQQGKKGSEWENLGTPVKTEQPAAPAAPAAPSSDIPH >gi|316918327|gb|ADCU01000016.1| GENE 244 268791 - 269213 363 140 aa, chain + ## HITS:1 COG:ECs4051 KEGG:ns NR:ns ## COG: ECs4051 COG0779 # Protein_GI_number: 15833305 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 140 13 152 152 254 90.0 2e-68 MISAPVEALGFELVGIEFIRSHHSTLRIYIDSDEGINVDDCADVSHQVSAVLDVEDPITV AYNLEVSSPGLDRPMFTADHYVRFMGEEVSLVLRMAVQNRRKWQGIIKAVEGEMITVTVD GKDEVFALSNIQKANLVPHF >gi|316918327|gb|ADCU01000016.1| GENE 245 269235 - 270722 1663 495 aa, chain + ## HITS:1 COG:YPO3497 KEGG:ns NR:ns ## COG: YPO3497 COG0195 # Protein_GI_number: 16123643 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Yersinia pestis # 1 494 1 494 495 821 92.0 0 MNKEILAVVEAVSNEKSLPREKIFEALETALATATKKKYEQEIDVRVCIDRKTGDFDTFR RWVIVDEVTQPTREITLDAAQFEDPALQLGEYVEDQIESVTFDRITTQTAKQVIVQKVRE AERAMVVDAFRQHQGEIVTGVVKKVSRDNISLDLGSNAEAVIGREDMLPRENFRPGDRIR GVLYDVRPEARGAQLFVSRSRPEMLVELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKT NDKRIDPVGACVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE DKHTMDIAVEASNLAQAIGRNGQNVRLAAQLSGWELNVMTVDDLQAKHQAEAHAAIDTFT KYLDIDEDFATLLVEEGFSTLEELAYVPEQELLAIDGLDEDTVDALRERAKNALTTLALA QEESLGDQKPAEDLLALEGLDRGIAFKMAARGVCTLEDLAEQGIDDLADIEGLNSEKAGE LIMAARNICWFGDSE >gi|316918327|gb|ADCU01000016.1| GENE 246 270747 - 273449 3196 900 aa, chain + ## HITS:1 COG:YPO3496 KEGG:ns NR:ns ## COG: YPO3496 COG0532 # Protein_GI_number: 16123642 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Yersinia pestis # 1 899 1 883 884 1217 85.0 0 MTEVTVKSLAAEIQTSVDRLVQQLADAGIKKSENDSVSPQERETLLAHLNREHGSASGKL TLQRKTRSTLNVPSTGGKSKAVQIEVRKKRTYVKGDAAAEQAEAEAQAQREAEEQARRET EEKAKREAEEKAKRIAEDQAKRNLEEQAKREAADKAKRGAAESEKVTNQNTDEKTKAAHA EKARREAEAAALKRKAEEEALRKLEEDAKRVSEEARKMAEANEGKAPEAETTEDASDYHV TTSHHAREAEDENDRQVEAGRARARTATKATKQKKGNKLSESKADREEARAQTRGGKGKR KPSTLQQGFNKPAQAVNRDVIIGETITVAELANKMAVKGSQVIKAMMKMGAMATINQVID QETAQMVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDY IRSTKVASGEAGGITQHIGAYHVQTDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVA ADDGVMPQTIEAIQHAKAAKVPVVVAVNKIDKPEADMDRVKNELSQYGVMPEEWGGESQF IPVSAKAGTGIDDLLDAILLQAEVLELKAVRSGMASGVVIESFLDKGRGPVATVLVQEGT LNKGDIVLCGFEYGRVRAMRDEMGREVTSAGPSIPVEILGLSSVPAAGDEATVVRDEKKA REVALYRQGKFREVKLARQQKSKLENMFANMSEGEVSELNIVLKSDVQGSCEAISDALLG LSTDEVKVKIVGSGVGGITETDATLAAASNAIILGFNVRADASARRVIEAESLDLRYYSV IYNLIDEVKQAMSGMLAPEYRQEIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRV LRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRSGDMIEVFEIIEVKRTIE >gi|316918327|gb|ADCU01000016.1| GENE 247 273522 - 273932 553 136 aa, chain + ## HITS:1 COG:STM3285 KEGG:ns NR:ns ## COG: STM3285 COG0858 # Protein_GI_number: 16766583 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Salmonella typhimurium LT2 # 1 123 1 124 133 187 83.0 5e-48 MAKEFSRTQRVSQEMQKEIAIILQREVKDPRIGMVTVSGVEVSRDLAYAKVFVTFLNDSD PNAVRVGLKALHEASGFIRMLIGKAMRLRVVPELTFSYDNSLVEGMRMSNLVTSVVKNDE ERRAASGNASGNTEEE >gi|316918327|gb|ADCU01000016.1| GENE 248 273932 - 274882 899 316 aa, chain + ## HITS:1 COG:YPO3494 KEGG:ns NR:ns ## COG: YPO3494 COG0130 # Protein_GI_number: 16123640 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Yersinia pestis # 1 311 1 311 324 462 74.0 1e-130 MSRPRRRGRDINGVLLLDKHQGLSSNDVLQKVKRIYNANKAGHTGALDPLATGMLPICLG ESTKFSQFLLDADKRYRVIARLGQRTNTSDADGEVVQERPVEFSQEQLDAALEQFRGDSQ QVPSMYSALKYQGKPLYEYARQGIEVPREARDITVYELQFIRWENDELELEIHCSKGTYI RTIIDDLGEVLGCGAHVIYLRRVQVSNYPSERMVTLEQLQQMVAAAEEASIEPKTVLDPL LLPMDTAASHLPEINLTDVVAAYVLQGQPVQVQGLLAEGMVRINVGEKRRFIGVGEVDDQ GRLAPRRLVVEERVPE >gi|316918327|gb|ADCU01000016.1| GENE 249 275011 - 275280 431 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238918427|ref|YP_002931941.1| ribosomal protein S15, putative [Edwardsiella ictaluri 93-146] # 1 89 1 89 89 170 96 6e-41 MSLSVEAKAQIVADFGRDANDSGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMV SQRRKLLDYLKRKDVARYTSLIERLGLRR >gi|316918327|gb|ADCU01000016.1| GENE 250 275616 - 277730 179 704 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116618391|ref|YP_818762.1| SSU ribosomal protein S1P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] # 466 690 39 265 396 73 28 9e-12 MLNPIVRKFQYGQNTVTLETGMMARQATAAVMVTMDDTAVFVTVVGAKKAKEGQSFFPLT VNYQERTYAAGRFPGGFFRREGRPGEGETLIARLIDRPIRPLFPEGFLNEVQVVATVVSV NPQVSPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTTDELQESKLDLVVA GTEGAVLMVESEAQLLSEDQMLGAVVFGHEQQQVVIENIKALAAEAGKPRWEWTAPAVNE ALHARVAALAEARIGDAYHITEKQARYAQIDQIKADVIAALQAEDESLNAGEIADVLGSL EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER DAQNIDGLTGEQTDRFLLHYNFPPYSVGETGMMGSPKRREIGHGRLAKRGVLAVMPKQDE FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDENFVVLSD ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA INAPRGDISEFAPRIHTIKINPEKIKDVIGKGGSVIRALTDETGTTIEIEDDGTVKIAAT DNEKAKHAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEASAPEQAAAPAAE >gi|316918327|gb|ADCU01000016.1| GENE 251 277830 - 278738 703 302 aa, chain + ## HITS:1 COG:YPO3489 KEGG:ns NR:ns ## COG: YPO3489 COG4785 # Protein_GI_number: 16123635 # Func_class: R General function prediction only # Function: Lipoprotein NlpI, contains TPR repeats # Organism: Yersinia pestis # 9 302 1 294 294 530 90.0 1e-150 MLVFGSWEMKPILRWCYVATAILLAGCSNLDWRKDEVLAIPLQPSLQQEVMLARMEQILA SRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNF DAAYEAFDSVLELDPTYNYARLNRGIALYYGGRYSLAQDDLQAFYQDDPNDPFRSLWLYL VEREIDPKKATASLEQRYNKANRNQWGWNIVEFYLGTINQKTLMTRLQEDATDNTSLAEH LSETDFYLGKHYLSLGDKSSASALFKLTVANNVHNFVEHRYALLELALLGQEQDDLSESD QQ >gi|316918327|gb|ADCU01000016.1| GENE 252 278910 - 280820 2050 636 aa, chain + ## HITS:1 COG:STM3280 KEGG:ns NR:ns ## COG: STM3280 COG0513 # Protein_GI_number: 16766578 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Salmonella typhimurium LT2 # 1 636 18 646 646 907 82.0 0 MAEFETSFADLGLAAPIIQALTDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF SLPLLHNIDPSLKAPQVLVLAPTRELAVQVSEAMADFAKHMNGVNVVALYGGQRYDVQLR ALRQGPQIVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIPAQ HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSITTRPDISQSYWTVFGMRKNEALVRFL EAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDILI ATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI ERIMKLTIPEVEIPNAELLGQRRLAKFAAKVQQQLESSDLDKYRDLLTKLQPEDELDMET LAAALLKMAQGERPLILPPDPVMERRPRREFRDRDDRNERGGDRFARRGDREPREAREGA PRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPK GMPGDLLSHFTRTRILNKPLNMQLMGDAPAREPRRERPAGDRGGRSAGGERRSFGGRDGA PRRDDRRGNSDRSAAPRGPRRDDAAQPPRRRTTNDA >gi|316918327|gb|ADCU01000016.1| GENE 253 280774 - 280962 80 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMQHSRHVVVLLTTRNNAVLNSMTKPTSGLAFFMSIIPPGGLLHGSSLISLFLAFEIRFI GV >gi|316918327|gb|ADCU01000016.1| GENE 254 281035 - 282246 1281 403 aa, chain + ## HITS:1 COG:STM1965 KEGG:ns NR:ns ## COG: STM1965 COG2391 # Protein_GI_number: 16765303 # Func_class: R General function prediction only # Function: Predicted transporter component # Organism: Salmonella typhimurium LT2 # 1 390 21 410 421 636 84.0 0 MSWQNFKQQYLIKFWAPLPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGHVLQLFGAHP EQWGYFKVIGLEGSPLERIDGMMIIGMFGGCFAAALWANNVKLRMPQHRIRILQAILGGM IAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAVGSYFGARFTLLPMFRIPVKLQKV SAASPLTQKPDQAKRRFRLGMIIFFAVVAWGGLTAMNAPKLGLAMLFGVGFGLLIERAQI CFTSAFRDLWITGRTHMAKAIIIGMAVSAIGIFSYVQMGLAPKIMWAGPNAIIGGVLFGF GIVLAGGCETGWMYRAVEGQVHFWWVGLGNIVGATILAYYWDDLAPSLATSYDKINLLQT FGPLGGLLVTYLMLLAAFLLVVAWEKRFFRTKNQVNNAVKEIA >gi|316918327|gb|ADCU01000016.1| GENE 255 282243 - 282482 304 79 aa, chain + ## HITS:1 COG:ECs2669 KEGG:ns NR:ns ## COG: ECs2669 COG0425 # Protein_GI_number: 15831923 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 5 79 3 77 77 132 93.0 1e-31 MKPTDIVPDYRLDMVGEPCPYPAVATLEAMPNLKVGEILEVVSDCPQSINNIPLDAKNHG YTVLDIQQDGPTIRYLIQR >gi|316918327|gb|ADCU01000016.1| GENE 256 282516 - 283538 869 340 aa, chain - ## HITS:1 COG:YPO3484 KEGG:ns NR:ns ## COG: YPO3484 COG2141 # Protein_GI_number: 16123630 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Yersinia pestis # 6 338 18 350 351 509 76.0 1e-144 MAAKNVPFSVLDLSPIPTGATARDAFHRSLSLAQHAEDWGYHRYWLAEHHNMTGIASAAT SVLIGYIAGGTQTIRVGSGGVMLPNHAPLVIAEQFGTLESLYPGRIDLGLGRAPGSDQRT MMALRRSLHGEIDDFPQDVAELQRYFGEVAAGQHVQAVPGQGLHIPIWLLGSSLYSAQLA AKLGLPFAFASHFAPDMLHQALAMYRSQFQPSKALAQPYAIVCINVVAADSERDARFLFT SMQQQFINLRRGEPGPLPAPVTDISAYWSAGEQYGVEQALRMSVVGDPLQVKNGLEALLR ETQADEVMVNGQIFDHQARLRSFEIVAEIKQQLNAAERIS >gi|316918327|gb|ADCU01000016.1| GENE 257 284169 - 285494 1032 441 aa, chain + ## HITS:1 COG:STM3239 KEGG:ns NR:ns ## COG: STM3239 COG0814 # Protein_GI_number: 16766538 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 1 441 1 443 443 704 88.0 0 METATENSSVVVNDYPSDSRGGMTESEWKAATKFDSTDAGWIIMSIGMAIGAGIVFLPVQ VGLMGLWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALY FVMLVIWMFVYSTAITNDSASYLHTFGVTDGLLSENPFYGLVLICILVAISSRGEKLLFK LSSFMVLTKLLVVAALGVSMVGMWHLYNVGSLPPMGLLIKNAIITLPFTLTSILFIQTLS PMVISYRSKEKSREVARFKALRAMNIAFGVLFVTVFFYAVSFTLAMGHDEAVKAYEQNIS ALAIAAQFFPGSWATVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRRMPAEKINE KWVQNGIMLFAILLAWSAIILNAPVLSFTSICSPIFGMVGCLIPAYLVYKVPALHKYKGT SLTIIIITGLLLCVSPFLAFS >gi|316918327|gb|ADCU01000016.1| GENE 258 285544 - 286887 910 447 aa, chain + ## HITS:1 COG:yhaN+M KEGG:ns NR:ns ## COG: yhaN+M COG3681 # Protein_GI_number: 16132252 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 16 446 7 435 436 501 68.0 1e-141 MSKYESENLLCTESRDELWNEFIRAVQQEVKPAVGCTEPVSLALAAAIAASYLPEPVERI EARVSPNLMKNGMGVTVPGTGMVGLPIAAAVGATGGDPKAGLEVLKHATPQAVEAGKSLL ASGGVSVSIQQPCEHILFSQVTVLGATESACVTIADGHTNVIKIVKNGEVLFDARLHSDE SSDAPCAEGYCLKKASLRQVFDFAVNVPLERIHFILEAATLNKALSLEGLSKQYGLHIGA TLQRQRDRGLLARDLLSDIMIRTSSASDARMGGAVMPAMSNSGSGNQGITATMPVVVVAE YLGADEAQLTRALMLSHLTAIYIHSQLPTLSALCAATTAAMGAAAGIAWLIEGRYEPVAM AISSMIGDVSGMICDGASNSCAMKVSTSVSAAYKAVLMALDDSCVTGNEGIVTDDVDRSI ANLCALACHSMQQTDTQIIEIMAKKAS >gi|316918327|gb|ADCU01000016.1| GENE 259 287090 - 287968 641 292 aa, chain - ## HITS:1 COG:YPO3480 KEGG:ns NR:ns ## COG: YPO3480 COG0826 # Protein_GI_number: 16123626 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Yersinia pestis # 1 291 1 291 292 507 80.0 1e-144 MKYSLGAVLYYWPKNEIETFYQAAAQSEADIIYLGETVCSKRREMKVADWLDVAKQVAHS GKQVVISTLALLQAPSELNELKRYVENGDFLIEANDLGTVNMAAERKLPFVAGHALNCYN AVTLRLLQKQGMVRWCMPVELSHDWLKNVMDQCESLGIRNKFEVEVLSYGHLPLAYSARC FTARSEDLPKDQCETCCIKYPQGRRVLSQENQQVFVLNGIQTQSGYCYNLGNNQLEMQGL VDIVRLSPESMDTLNVLSQFRANERGLEPLTLENRADCNGYWQRVAGLELIQ >gi|316918327|gb|ADCU01000016.1| GENE 260 287980 - 288975 935 331 aa, chain - ## HITS:1 COG:ECs4039 KEGG:ns NR:ns ## COG: ECs4039 COG0826 # Protein_GI_number: 15833293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 621 88.0 1e-178 MELLCPAGNLPALKAAIDNGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSYVHNHKRK LHIAINTFAHPDGYARWERAVDMAAQLGADALILADLAMLEYAAERYPQVERHVSVQASA TNDEAIRFYKQHFDVSRVVLPRVLSIHQVKQLARTSEVPLEVFAFGSLCIMAEGRCYLSS YLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYEEGENAGYPTLCKGRYLVDG EKYHALEEPTSLNTLELLPDLMGANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCQKDPE GYKAEQSWMDSLGAMAEGTQTTLGAYHRKWQ >gi|316918327|gb|ADCU01000016.1| GENE 261 289278 - 289799 487 173 aa, chain + ## HITS:1 COG:YPO3477 KEGG:ns NR:ns ## COG: YPO3477 COG3154 # Protein_GI_number: 16123623 # Func_class: I Lipid transport and metabolism # Function: Putative lipid carrier protein # Organism: Yersinia pestis # 1 173 1 173 173 243 75.0 9e-65 MLEQLRARLVRQGPAFLSVPLKFTPFALQRQVLEQLLGWQFRQALADDELEFLEQRWLKV EVRDLGLKWFVTVNEGKLQVSQHQDADVSFSADANDLILIAARKEDPDTLFFQRRLRIEG DTELGLYVKNLMDAIDLDAMPKPLRFGLLQLAEFVDAGMKEVSTSATQEVSPC >gi|316918327|gb|ADCU01000016.1| GENE 262 289793 - 290311 548 172 aa, chain + ## HITS:1 COG:ECs4037 KEGG:ns NR:ns ## COG: ECs4037 COG3153 # Protein_GI_number: 15833291 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli O157:H7 # 1 166 1 166 167 207 64.0 8e-54 MLIRVEIPVDAAGIDRLLRNAFPSSEEAELVHRLREDGLLTLGVVATDEEGGVIGYAAFS PVYVDGEDRQCVGLAPVVVDEAHRRQGLAEQIIYEGLDSLNEFGYSAVVVLGEPAYFSRF GFQNAAQQGLRSHLPGTEDSFLVYPLAGGEMENCKGVVEYSAPFGRSESTTV >gi|316918327|gb|ADCU01000016.1| GENE 263 290392 - 291699 945 435 aa, chain - ## HITS:1 COG:BH1882 KEGG:ns NR:ns ## COG: BH1882 COG1457 # Protein_GI_number: 15614445 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Bacillus halodurans # 3 429 9 434 445 142 27.0 2e-33 MIKIEDYPLSRVPQDKRVSFLSVAIVHMGMLTALDQFMLGAVLGNSMTLTDAFTAILIGS VIFGIVTYGLGLAGMREGISGSLLARWCGFGRLGSVLIGVVVAVSLLGWFGIQNAIFAKS LDFALNHKLGFGWAAALSGSFLTILVAFGFKALRIAARIAVPMFISLVAYISFNVLSGHN LPEIMQLLPPGEPLSISAGITIVVGGAIVASLMTPDLTRYSKNRKHVLGVTILTIVAGEF IINGLAILIAKTLGTADVVTIMAQAAGGAGLLVVVFSTLRVNDLNLYSSSLGIVNAVEGL TGKKLKYISTTLVIGILGTTLSVLGILDRFVDFLTVLGVVFPPIIGIMLVDYFVVRSHRK ILDLSRSEGKLPDDVQTPAIGWIAIIASIVGSIVGLVTEWGIPTINSLLAASLIYWLATL AVNRSQKTVEPEKVL >gi|316918327|gb|ADCU01000016.1| GENE 264 291781 - 292419 337 212 aa, chain - ## HITS:1 COG:PA1347 KEGG:ns NR:ns ## COG: PA1347 COG2197 # Protein_GI_number: 15596544 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Pseudomonas aeruginosa # 3 201 29 218 230 66 28.0 3e-11 MMEHLSEPWGIKDRQSRHIYMNKAAYLYTNTPLDFDIEGKLDNEFPAHWAEFSPEFIEHD KRTEESQDRVTVIETHYWYGKDFLMPFISEKLPIYNDKKELIGVMWNAKPLNSLSPLKYI NHQKPSILTTETNSETFTRAELDVIFLMLQRLSVKEIAKIYNISTKTIENRIYTIYQKCD VHTQQQFEEFCQFEQLDNYIPDRLVAKGIQFI >gi|316918327|gb|ADCU01000016.1| GENE 265 292496 - 292906 348 136 aa, chain - ## HITS:1 COG:STM1857 KEGG:ns NR:ns ## COG: STM1857 COG0454 # Protein_GI_number: 16765198 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 134 1 136 139 86 39.0 1e-17 MKINVTDAPNPQDEEYVIDSLWAHNSKTEAVDIHPLFLTVTDDNGEIVGGLVARTWWGGL EVQYLWVSDKYRKCGYGRQLMVRAEAEASKRGCHMAYVDTFDFQARGFYEKLGYRVYGNL DGYAKKFTRHYLAKEI >gi|316918327|gb|ADCU01000016.1| GENE 266 293237 - 293611 256 124 aa, chain - ## HITS:1 COG:STM3271 KEGG:ns NR:ns ## COG: STM3271 COG2827 # Protein_GI_number: 16766569 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Salmonella typhimurium LT2 # 8 101 7 95 105 108 69.0 2e-24 MTTEPHETLWYLYLIRTASGALYTGITTDVERRYQQHQTGRGAKALRGKGPLQLAFSDLV GEQGQALRLEHRIKQLNKKQKERLVAEKPALLEVWLEAILSGKSAVSGRRLSSTQLSAKQ TTKQ >gi|316918327|gb|ADCU01000016.1| GENE 267 293680 - 294114 265 144 aa, chain + ## HITS:1 COG:YPO3467 KEGG:ns NR:ns ## COG: YPO3467 COG3787 # Protein_GI_number: 16123613 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 8 141 10 143 147 168 58.0 3e-42 MTTDKEHICRFLNAQHVLTLATCWEGEMWCANCFYVFDEVRMALYFMTETRTRHGGMLLN NPKVAGTIAHQTKTIALIRGLQFSGEAVQLQGEEEQRARSLYYQQFPAARLMSAPVWQLS LHQIKMTDNKLGFAKKIHWERDPE >gi|316918327|gb|ADCU01000016.1| GENE 268 294237 - 294866 536 209 aa, chain + ## HITS:1 COG:YPO3466 KEGG:ns NR:ns ## COG: YPO3466 COG0702 # Protein_GI_number: 16123612 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Yersinia pestis # 2 206 3 207 212 197 51.0 1e-50 MKTLLLGATGLVGSELLKLLEQDPGISKIYAPTRKPLPPSEKLVNPVADDLCATMATWTT PIDIAFCCLGTTRKDAGSDAAFRYVDYTLVVECGSVALKNGCQHYVVVSALGANPQSSFL YSRTKGEMEKALELQAWQFLTILRPSMLQGGRSKPRLLEQISEPIFKLLPEKWKAVEASA VAMAMLKSARNPPPYRLQIIESEQIQKYA >gi|316918327|gb|ADCU01000016.1| GENE 269 294851 - 295639 516 262 aa, chain - ## HITS:1 COG:ECs5075 KEGG:ns NR:ns ## COG: ECs5075 COG1235 # Protein_GI_number: 15834329 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Escherichia coli O157:H7 # 3 250 2 249 252 350 64.0 1e-96 MSTLKLTFLGTGGAQQVPAFGCECAACLRAQQQPSYRRKPCSAMLEYNGALTLLDAGLHD LTERFTPTQISQFLLTHYHMDHVQGLFPLRWGMGAAIPVYGPPDELGCDDLFKHPGMLDF NHRLNAFEPFYLQELQVTPLPLNHSKLTFGYLLATPDRRIAYLTDTAGLPESTLNVLRHQ PPEIIIIDCSYEPRAFTPKNHNDLNTVVELQKEIGCQKIWLTHISHQFDLWMMENALPKG IEAARDGLTLTAKADGYDYAYF >gi|316918327|gb|ADCU01000016.1| GENE 270 295642 - 296085 417 147 aa, chain - ## HITS:1 COG:phnO KEGG:ns NR:ns ## COG: phnO COG0454 # Protein_GI_number: 16131919 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 6 144 6 144 144 169 62.0 2e-42 MSDIILRPATALDEAAVYRLICELEQCEFDSVAFAKGYAMNLANPHVHYTLATRGHEILG FIGIHLQYHLHHVNWIAEIQELVISPQARGAGVGKALLRWAENIACELGAEQIELSTRAT RHDAHRFYLREGYLHTHFRFVKPLSEL >gi|316918327|gb|ADCU01000016.1| GENE 271 296101 - 296664 457 187 aa, chain - ## HITS:1 COG:phnN KEGG:ns NR:ns ## COG: phnN COG3709 # Protein_GI_number: 16131920 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized component of phosphonate metabolism # Organism: Escherichia coli K12 # 1 177 2 175 185 191 58.0 6e-49 MGKLIYLVGASGSGKDSLLQALRKQQTIPLLVAHRYITRACNAGSENHIELSETEFMQRR SQGLFALNWQANQHYYALGIEIDQWLAQGINVVVNGSRAHLPFARERYGNAMLAVCLQVS PNILRQRLQARGRETPQQIEQRLQRARDYQLAENAGCYYLNNNDGLSHTVQAFLRLMVET TPVSVSA >gi|316918327|gb|ADCU01000016.1| GENE 272 296664 - 297800 835 378 aa, chain - ## HITS:1 COG:ECs5078 KEGG:ns NR:ns ## COG: ECs5078 COG3454 # Protein_GI_number: 15834332 # Func_class: P Inorganic ion transport and metabolism # Function: Metal-dependent hydrolase involved in phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 592 76.0 1e-169 MIINNVKLVLENEVVTGSIEVQDGVIRTVADSDSRLPEALDGNGGWLLPGLIELHTDNLD KFFTPRPKVSWPAHSAMSSHDALMVSSGITTVLDAVALGDVRDGGDRLDNLEKMINAVID SQQRGMNRAEHRLHLRCELPHHSTLPLLQQLIEKRGVSLVSLMDHSPGQRQFVNPQKYRE YFQGKYHLSDEQMDTYEREQLENAERWSQPNRHAIAELCRSRCIALASHDDATEAHADES HKLGSVIAEFPTTAEAAHASHQRGLQVMMGAPNIVRGGSHSGNVAAHELASLGVLDILSS DYYPASLLDAAFSVAACDSNAFTLPQAISLVTRNPAKALGLSDRGILAEGKRADLVLAQR HGEHVHVNHVWREGIRVF >gi|316918327|gb|ADCU01000016.1| GENE 273 297813 - 298502 243 229 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 7 229 2 214 245 98 29 3e-19 MTTTTRLRVENLSKTFVLHHQNSIHLPVLAGASLEVHSGECVVLHGHSGSGKSTLLRSLY ANYLPDEGSIWVNHQGEWLDMVQAPARQILAVRRKTIGWVSQFLRVIPRISALEVVMQPM LELGFKRQACEQKAAALLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFVVDYPILLLDE PTASLDTTNSAAVVSLIDEAKARGAAIVGIFHDEAVRNHVADRLHVMTE >gi|316918327|gb|ADCU01000016.1| GENE 274 298512 - 299318 353 268 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 10 267 4 267 329 140 33 6e-32 MNNTDSIFSAPESDLPLLSVNNLTHLYAPGKGFSDVTFDLYPGEVLGIVGESGSGKTTLL KAISARLTPQQGSIRYLSTQGVRDLYAMSESDRRRLLRTEWGVVHQHPLDGLRPHVSAGG NIGERLMAVGQRHYGNIRAEAMRWLEDVEIPATRIDDLPTTFSGGMQQRLQIARNLVTHP RVVFMDEPTGGLDVSVQARLLDLLRTLVVDLQLAVVIVTHDLGVARLLAHRLLVMKQGKV VESGLTDRVLDDPHHPYTQLLVSSVLQN >gi|316918327|gb|ADCU01000016.1| GENE 275 299315 - 300163 833 282 aa, chain - ## HITS:1 COG:ECs5081 KEGG:ns NR:ns ## COG: ECs5081 COG3627 # Protein_GI_number: 15834335 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 5 282 4 281 281 516 89.0 1e-146 MTNVLTGYNFGYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASV IGESDTLKVIDQGADDTTNAVSIRRFFQRVTGVKTTETTADATLIQTRHRIPETPLREDQ IIIYQVPMPEPLRFIEPRETETRKMHALEEYGVMQVKLYEDIARFGHIATTYDYPVKVNN RYVMAPSPIPKFDNPKMNMMPALQLFGAGREKRIYAVPPFTKVESLDFDDHPFSVQKWDQ PCAICGSKQSYLDEVVLDDQGARMFVCSDTDFCRQHSEANAQ >gi|316918327|gb|ADCU01000016.1| GENE 276 300156 - 301241 1025 361 aa, chain - ## HITS:1 COG:ECs5082 KEGG:ns NR:ns ## COG: ECs5082 COG3626 # Protein_GI_number: 15834336 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 353 1 352 354 551 80.0 1e-156 MYVAVKGGEKAIAAAHRLQEQKRRGSTQFDELNVDQIEQQLALAVDRVMTEGGIYDRQLA ALAIKQASGDLVEAIFLLRAYRTTLPRLAISNALDTDEMRLERRISAVYKDLPGGQVLGP TYDYTHRLLDFTLLANGEMPNVEQVSEAEEIPCPHVFSMLAQQNLAREEHDDGHEPDDIT RNPPVYPCSRASRLQQLARGDEGYLLALGYSTQRGYGRNHPFAGEIRSGFVKLSITPEEL GFSVDVGELLLTECEMVNGFVAEQDTPPHFTRGYGLVFGMSERKAMAMALVDRALQAPDY QEQVKGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLNRLQQEFNDRQENAH D >gi|316918327|gb|ADCU01000016.1| GENE 277 301225 - 301824 401 199 aa, chain - ## HITS:1 COG:ECs5083 KEGG:ns NR:ns ## COG: ECs5083 COG3625 # Protein_GI_number: 15834337 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 193 1 193 194 247 66.0 9e-66 MTLMTAFTLPVQDAQHHFRRLLKAMSEPGVIVSLNNTPEGWQPLNSATTSVLLTLSDQDT PVWLAPELCSETACQNLRFHTGAVLATEPSQATFTVVNDQVRAKQLNDFAQGEDVSPEAS ATVIVEVKSLSGGHMLRLTGPGILEERMIAPQISDVVLNALTERLHAFPLGCDFIFTCGE RLLAIPRTTHVEVFDVRSR >gi|316918327|gb|ADCU01000016.1| GENE 278 301824 - 302297 333 157 aa, chain - ## HITS:1 COG:ECs5084 KEGG:ns NR:ns ## COG: ECs5084 COG3624 # Protein_GI_number: 15834338 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 9 157 2 149 150 154 57.0 6e-38 MDASHTHAHFSLAERQRWMATLAHSQPDDLNPLWDVMHFPHVEWKNIRSAETGLVQIQAR AGARGQRFFLGDATLTRAVIQLECGTYGYSYLLGRDKLHAERCALIDALLQKREHAPHLL ENLINPLAALQQERHQQRAQEIAASRVDFFTLVRGDN >gi|316918327|gb|ADCU01000016.1| GENE 279 302298 - 303023 671 241 aa, chain - ## HITS:1 COG:phnF KEGG:ns NR:ns ## COG: phnF COG2188 # Protein_GI_number: 16131928 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 241 1 241 241 359 75.0 2e-99 MHLSRHPTSYPTRYQEIAALLELELRQNYQCGDYLPAEHQLAEHYDVNRHTLRRAIDELV VRGWVQRRQGVGVLVLMRPFDYPLHSQARFSQNLLEQGSHPTSERLISVLRPTVSHIADA LGMEEGQQVIHLRTLRRVNGVPVCVIDHFLPDLTWWGALQQFTSGSLHDYIQQHLGCELS RTQTRISARRAQAKESRLLEIATHAPLMCVRTLNHREGQSQPAEYSVSLTRADMIELTME H >gi|316918327|gb|ADCU01000016.1| GENE 280 303042 - 303836 873 264 aa, chain - ## HITS:1 COG:ECs5086 KEGG:ns NR:ns ## COG: ECs5086 COG3639 # Protein_GI_number: 15834340 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 264 18 276 276 421 85.0 1e-118 MQTTQSTAPAVPEQKRSWFSLFTWAILIAVLAWSWHGAEMAPLTLFRDAGNMATFAADFF PPDFSQWQQYLGEMLVTLQIAVWGTALSIVLSIPLGLMSAENLVPWWIYQPTRRLMDACR AINEMVFAMLFVVAVGLGPFAGVLALFIHTTGVLAKLFSEAVEAIEPGPIEGVKATGANK LEEIIYGVLPQVMPLWISYSLYRFESNVRSATVVGMVGAGGIGVTLWEAIRGFQFQQTCA LMVFIIVTVSLLDFMSQRLRKHFI >gi|316918327|gb|ADCU01000016.1| GENE 281 303920 - 304936 765 338 aa, chain - ## HITS:1 COG:phnD KEGG:ns NR:ns ## COG: phnD COG3221 # Protein_GI_number: 16131931 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, periplasmic component # Organism: Escherichia coli K12 # 8 338 4 338 338 524 80.0 1e-149 MTYKVACKTVAALAFSVCTLFGTAHADDQAPALNFGIISTESQQNLKPQWDPFLKDMEKT LGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRANGQVFAQTVAADGSPGYW SVLIVNKDSPINNVQEMLAKKKDLTFGNGDPNSTSGYLVPGYYVFAKNNTAASDFKRTVN ANHETNALAVANKQVDVATNNTENLDRLKITAPEKFKDLKVIWKSPLIPGDPIVWRKNLP EETKQKIYGFFMNYGKTPEEQQVLKGLSWAPFRPSSDLQLVPIRQLSLFKQSQTIKANAG LNPADKATKTAALQAQMDDLDRLSSALNAMNSLKTATQ >gi|316918327|gb|ADCU01000016.1| GENE 282 304972 - 305775 242 267 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 243 1 226 305 97 28 5e-19 MSPIIRVTNLSKTFAGQQALHSVGLEVQQGQMVALLGPSGSGKSTLLRHLSGLITGDRRD DSHIELLGRTIQKQGRLASDIRSSRSHIGYIFQQFNLVNRLTVMENVLIGALGATPFWRT CCGWFTQEQKQQAMQALTRVGMASFAQQRVSTLSGGQQQRVAIARALMQKAKVILADEPI ASLDPESARIVMETLLDINQKDGITVVVTLHQVDYALRYCERVIALRQGHVFYDGASAHL QREQIEHLYRGVNRVDVPNPEAEAVAA >gi|316918327|gb|ADCU01000016.1| GENE 283 306037 - 306516 455 159 aa, chain - ## HITS:1 COG:ECs5214 KEGG:ns NR:ns ## COG: ECs5214 COG0602 # Protein_GI_number: 15834468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Escherichia coli O157:H7 # 6 159 1 154 154 301 89.0 3e-82 MGKPSMNFHQYYPVDVVNGPGTRCTLFVSGCVHECPGCYNKSTWRLNSGLPFTQEMEDQI INDLNDTRIRRQGLSLSGGDPLHPQNVPFILKLVQRVRAECEGKDIWVWTGYKLDELNAA QQEVVDLINVLVDGKFVQDLKDPMLIWRGSSNQVIHKLR >gi|316918327|gb|ADCU01000016.1| GENE 284 306690 - 308828 1929 712 aa, chain - ## HITS:1 COG:YPO3454 KEGG:ns NR:ns ## COG: YPO3454 COG1328 # Protein_GI_number: 16123600 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Yersinia pestis # 1 712 1 712 712 1350 88.0 0 MKPIVIKRDGCQVPFDEQRIKEAVVRAAQAAGVDDTDYCATVARVVAMQMADLERVDIHV IQNAVENQLMAGNYKQLARAYIEYRHDRDVSREQRGRLNQEIRGLVEQSNAALLNENANK DSKVIPTQRDLLAGIVAKHYATQHILPRDVVLAHERGEIHYHDLDYSPFFPMFNCMLIDL KGMLTNGFKMGNAEIERPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASF EKHRQTAAEWNIPDADGYAKTRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS WESRLIQQSILKNRIAGLGKNRKTAVFPKLVFAIRDGLNHKFGDANYDIKQLALECASKR MYPDILNYDQVVKVTGSFKTPMGCRSFLGVYEENGEMIHEGRNNLGVISLNLPRIALEAK GDEAAFLKLLDERLELSKKALMTRIARLEGIKARVAPILYMEGACGVRLKADDNIADIFK NGRASISLGYIGIHETINALFGNQTHVFDDEALRAKAVAIVARLQQATDSWKEETGYGFS LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKLDFEAPYPPL ASGGFICYGEYPNLQHNLKALEDVWDYSYSRVPYYGTNTPIDECYECGFTGEFECTSKGF TCPKCGNHDSAKVSVIRRVCGYLGSPDARPFNAGKQEEVKRRVKHLNNGQIG >gi|316918327|gb|ADCU01000016.1| GENE 285 309221 - 309913 603 230 aa, chain - ## HITS:1 COG:yhaK KEGG:ns NR:ns ## COG: yhaK COG1741 # Protein_GI_number: 16131001 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Escherichia coli K12 # 1 230 1 233 233 328 66.0 4e-90 MITQRKAQNCGHADYGWLKSRYTFSFGHYFDPKLMGYASLRVLNQDVLAPGASLQPRTFP RVDVLNIILDGDVEYRDSEGSHTQAHTGDVVLLATQGNISYSEHNLNSDKPLTRMQLWLN VCPERENDEIQRLTLTEEPYRLLASPEGDNGSLQLRQQVWIHHLDLKPGEKHTLPLHGSR AYVQSIHGSYKTQDSTELLACGDGAFINDEENLTLTAVTPLRALVIDLPV >gi|316918327|gb|ADCU01000016.1| GENE 286 310024 - 310917 997 297 aa, chain + ## HITS:1 COG:ECs3987 KEGG:ns NR:ns ## COG: ECs3987 COG0583 # Protein_GI_number: 15833241 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 296 1 296 298 483 86.0 1e-136 MSKDRALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHR TKFTNVGRMLLERGRILLEAADKLTTDAEALSRGWETHITVVCEALVPATQLFPLVDKLA KKANTQLSLMTEVLAGAWERLEQGRADIVIAPDMHFRSSSEINVRKLYKIMSVYVAAPEH PIHLEPEPLSDAVRVKYRGIAVADTARERPVLTVQLLDKQQRLTVSTIADKRQALIDGLG VATMPYPLVEQDIAEGRLRVVSAEYSHETDIIMAWRRDSMGEAKSWLLREIPKLLSR >gi|316918327|gb|ADCU01000016.1| GENE 287 310947 - 311798 320 283 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020671|ref|YP_526498.1| ribosomal protein S6 [Saccharophagus degradans 2-40] # 3 283 4 286 293 127 26 4e-28 MDRRRALWLMHGATVLFGISGIFGKLIASSAAVLVFGRAIFALAAMSLLLMKLKRLPWRD LDLRSVGRLCACGALLCAHWVTFFIAVKVGGVAVGTLGFACFPAFVAILEGLLYREKLSS SEYVLILLVTIGLVLVTPSFNFENSATEGLLWGVLSGLIYAILALANRHSAASVNGTQVC WWQNLAVIVLLLPFTYHELPQVSAMDWVWIACLGLICTGLAYSLFISSLQALKARMAAMI IALEPVYAILIAWALFHEVPSLRMVSGGLLIILAVAWSARRKS >gi|316918327|gb|ADCU01000016.1| GENE 288 311847 - 313088 1232 413 aa, chain - ## HITS:1 COG:YPO0584 KEGG:ns NR:ns ## COG: YPO0584 COG3633 # Protein_GI_number: 16120913 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Yersinia pestis # 1 410 5 415 422 525 78.0 1e-149 MEKQSGFMRFITRGSLVGQILVGLVLGILLASIAPNAAIEVGLLGSLFVSALKAVAPILV FVLVAASIANHKAGQRTNMRPILFLYLLGTFSAALVAVLLSFAFPSTLTLVAGNTDITPP GGIVEVLRSLLMNVVDNPFRALTTGNFIGILAWAIGLGVALRHASDTTKLVVSDLSYGIT FIVRVVIRFAPLGIFGLVASTLAETGFDALWGYAQLLAVLIGAMLLVALVLNPLIVFWKI RRNPYPLVFTCLRESGLTAFFTRSSAANIPVNMELAKKLKLHEDTYSVSIPLGATINMAG AAITITVLTLAAVHTLGITVDLPTALLLSVVASICACGASGVAGGSLLLIPLACSLFGIN NDLAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAACQAEEAKELAKQPELS >gi|316918327|gb|ADCU01000016.1| GENE 289 313438 - 314409 1052 323 aa, chain - ## HITS:1 COG:STM3224 KEGG:ns NR:ns ## COG: STM3224 COG0861 # Protein_GI_number: 16766523 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Salmonella typhimurium LT2 # 2 322 1 322 322 461 80.0 1e-130 MINSIGSPLLWGSFAVIVVIMLAVDLLLQGRRGAATMTLRQAAIWSLVWVSLSLLFNAGL WWYLSETMGRAVADKQALAFLTGYLIEKALAVDNVFVWLMLFSYFSVPPNLQRRVLVFGV LGAIVLRTIMIFAGSWLVTQFQWILYVFGAFLLFTGVKMALAKEDDGDIGDKPLVRWIRS HLRMTDKIENEHFFTRRNGVLFATPLLLVLILVELSDVIFAVDSIPAIFAVTTDPFLVLT SNLFAILGLRAMYFLLAGVAERFSMLKYGLSVILVFIGFKMLIMDLYHIPIAVSLSVVAG ILVLTLVINVLVNRRNDRLKSQI >gi|316918327|gb|ADCU01000016.1| GENE 290 314819 - 315541 596 240 aa, chain - ## HITS:1 COG:RSc0213 KEGG:ns NR:ns ## COG: RSc0213 COG0518 # Protein_GI_number: 17544932 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Ralstonia solanacearum # 6 237 3 234 238 196 45.0 4e-50 MAEFEVKPFVILQTGDAPDVIRQQHGGFTDMFLQQGEINPASVVVVNLPAGEQLLSPEHY RGAIITGSAAMVTELLPWSEQAAVWLRDAVGMGLPIFGACYGHQLLAHALGGEVGYHPQG MEIGTLEIELLPEAKNDPALQYYPPRFYANLIHSQTVLRLPEGAIALARSAQDPHQIIRY RDNVMSTQFHPEFNGPIMHSYMSWIAELEPEHQTKYLDIQRRTSNTPVSQSLLREFVSGL >gi|316918327|gb|ADCU01000016.1| GENE 291 315723 - 316646 910 307 aa, chain + ## HITS:1 COG:yijE KEGG:ns NR:ns ## COG: yijE COG0697 # Protein_GI_number: 16131781 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 296 12 307 312 395 78.0 1e-110 MSVAGKTDPLAFVGLVLLTLIWSYSWIAMKQVTLYIGAFDFTALRCVFGAILLLVVLKLR GRGMKPTPFLYTLAIAVLQTCGMVGLAQWALISGGAGKVAILTYTMPFWVVIMAALFLGE RMRRVQYLAIVVAAIGLCLVLQPWKLTGESLKSAVLAILSGISWGASAIVAKRLYQRYPK VDLLSLTTWQMVYGAIIMSVIAWLVPERPIVWDPYVYFALSYSAILATALAWTLWLFVLK NLPAGIAGLSTLAVPVCGVLFSWWLLGENPGSVEGSGIVLIVLALAVLSFGGKRPIKAPI QQVKSSR >gi|316918327|gb|ADCU01000016.1| GENE 292 316688 - 317725 829 345 aa, chain - ## HITS:1 COG:YPO0585 KEGG:ns NR:ns ## COG: YPO0585 COG0673 # Protein_GI_number: 16120914 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Yersinia pestis # 1 334 1 328 331 461 67.0 1e-130 MIRFAVIGTNWITQRFIDAAHATGKMQLTAVYSRHLAQAYTFGEPNKAQYFFDSLDDLGS CEHVDAVYIASPNSFHYPHTLAMLQHKKHVICEKPLASNLQEVESMIACAHENQVVLFEA FKTAYLPNFSVIQQALPRLGKLRKVFLNYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDI GYYCLASAISLFGEPETLTASATLLDSGVDAHGHVGMNYSANHANGEFDVVLFHSKVSNS DIPSEIQGEDGTLVIEKISECQKVTFTPRGGQPEIISQPQHENTMYYEAEVFAKLVQYQS VEHAGINVSRSTAKILTQIRALTGVEFPADAAIPPETVVVPNTRG >gi|316918327|gb|ADCU01000016.1| GENE 293 317818 - 318321 526 167 aa, chain - ## HITS:1 COG:YPO0586 KEGG:ns NR:ns ## COG: YPO0586 COG1451 # Protein_GI_number: 16120915 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Yersinia pestis # 1 167 1 167 169 253 79.0 1e-67 MTSLTYLAGYPEHLQTQVRQLLDQQRLGTVLLQRYPQPHQLTTDRALYQYTTDLKNQFLR NAPQINKVGYDSKIQMLKHALGLHTAISRVQGNKLKAKAEIRVATVFKNAPEAFLRMIVV HELAHLREKDHNKAFYNLCCHMEPAYHQLEFDTRMYLTHLELVGALY >gi|316918327|gb|ADCU01000016.1| GENE 294 318480 - 319646 453 388 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative [marine gamma proteobacterium HTCC2148] # 17 381 17 368 371 179 33 2e-43 MSQLEPISGFFEENGLELERYPQQSDDPTLQAWEAADEYLLQSFELPQTEGRPVIVFNDA FGALACALHGQPLYSVSDSYVSQLATRHNLGLNGMDDDTVTLLDSLAPLPESPALVLIKV PKALALLEHQLRALREVVAPDTVIIAAAKARDIHTSTLQLFETILGDTHTSLAWKKARLI HCKVAERNPAPAQPTTVWPLDLCGTDEPYQMHNHASVFSRSNLDIGARFFLEHLPKDIEG SIADLGCGNGVIGLKALELNPNADMLFCDESYMAVASAQMNVEVNRPEDMDRCAFRVGNG FSGVDGGSLNAVLCNPPFHQQHSITDQVAWDMFVGAKRCLKIHGTLYIVGNRHLDYFHKL KRLFGNCTTIETNKKFVVLKATKLPPRR >gi|316918327|gb|ADCU01000016.1| GENE 295 319800 - 320963 1022 387 aa, chain + ## HITS:1 COG:BH1665 KEGG:ns NR:ns ## COG: BH1665 COG0079 # Protein_GI_number: 15614228 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Bacillus halodurans # 51 370 37 347 369 162 32.0 7e-40 MDRRTLLKSSGAILGGLTLSGLINRAQAATPVKAAEISFPTEQHPLLLNFNENSLGMSVQ AKQAVVDCLPTAFRYPDAARAELIEQLAGQFNLKTENVTLGNGSSETIQAAVQAIVLQAQ QQQKKVQVIVPDPTFNYAELYAKPLGADIVKVPLNDKLEFDLATMKQKADGFSGKSIVYL CNPNNPTATITPAATIESWIKNAPADTFFIVDEAYAEFVNDPRFKSAIGLVQSGQKNLIV TRTFSKIYALAGLRIGYGIAAPSVIAEVENFVSLDNTNAAGAVAALASLKDKTFVALSRK SIDLSRQIVTSMLDELNLEYVPSQANFIFHKVNGDVKTYQERMKQQNVYVGREFPPAVGW SRLTLGTPQEMQVFVSVLKSFRAKGWV >gi|316918327|gb|ADCU01000016.1| GENE 296 321555 - 322913 1004 452 aa, chain - ## HITS:1 COG:ZygiY KEGG:ns NR:ns ## COG: ZygiY COG0642 # Protein_GI_number: 15803568 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 6 451 7 449 449 530 61.0 1e-150 MKSLTLSLRLRLIIGFILLITITWVCASLLAWNQTRNNIDELFDTQQMLFAKRLTALNIS DLTVKSPQLPRSKKIVRHSHGDLDDDALTFAIFTTDGKMVLNDGDNGPDLQYHYRRDGFT DDQLQGDKDLWRLVWLTTPDGKYRVVVGQEWDYRHDMAIDIVKAQLVPWIIALPIMILLL IWLVTRELAPLKRLAKRLHQRQPEDETPLPLLSLPSEVKPLVEALNSLFARTGEMLVRER RFTSDAAHELRSPLAALKVQTEVAQLAGDDTAMREHALTNLTEGIDRATRVVDQLLTLSR LDSLSGLDDVQEIAIADILQTGVMDNYHKAQANGVELMLDIRQTPPPRRAQPLLLALLVR NLLDNAIRYSPRGSTVKITLTATHFSVEDNGPGVSPEYLKRIGERFFRPPGQEKTGSGLG LSIVQRIATLHGMTASFSDGESGGFRVEVAFT >gi|316918327|gb|ADCU01000016.1| GENE 297 322910 - 323572 774 220 aa, chain - ## HITS:1 COG:STM3177 KEGG:ns NR:ns ## COG: STM3177 COG0745 # Protein_GI_number: 16766477 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 219 1 219 219 342 76.0 2e-94 MRVLLIEDDKLIGDGIKAGLIKMGFSVDWFTEGKQGLNALDSAPYDAVVLDLSLPGMDGL DILRKWRQNGHDEPVLILTARDALEQRVAGLQQGADDYLCKPFALIEVAARLQALIRRRH GQVQTTLTHGPVSLDPINLTVTHEGEAIYLKPKEFALLELLLRNEGRVLPRPLIEEKIYN WDDDVSSNAIEVHIHHLRKKFGSSFIRTVHGIGYTLGEAT >gi|316918327|gb|ADCU01000016.1| GENE 298 323800 - 324207 522 135 aa, chain + ## HITS:1 COG:ECs3906 KEGG:ns NR:ns ## COG: ECs3906 COG3111 # Protein_GI_number: 15833160 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 134 1 128 130 166 64.0 1e-41 MKKTAALLAILAVCSAPVLAQNGGFVDPNAPATQTTQTTQAAGGFNGPSAGAMTVEKAKT MSDDTWVTLRGNIEQRIGGDHYTFRDASGTMNVDIDHKRWNGQTITPKDTVELQGKIDKD WNSVELDVKQITKVK >gi|316918327|gb|ADCU01000016.1| GENE 299 324262 - 326283 1686 673 aa, chain - ## HITS:1 COG:YPO0589_1 KEGG:ns NR:ns ## COG: YPO0589_1 COG1902 # Protein_GI_number: 16120918 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Yersinia pestis # 1 355 1 355 355 580 78.0 1e-165 MNHYPHLLAPLDLGFTTLKNRVLMGSMHTGLEEHPNGSARLAAFYAERARAGVGLIVTGG ISPNQHGVVHAGASIFDHENQIPHHKIITDAVHQAGGKIALQILHTGRYSYQPQPHAPSA IQAPINPYPPIEMTEDMIQQTLSDFAQCARLAQHAGYDGVEIMGSEGYLINQFLAARTNQ RDDEWGGDFIRRMRFAVECVRRVRAAVGREFIIIYRLSMLDLVEEGSDWKEIEQLAVQVE HAGATLINTGIGWHEARIPTIATMVPRAGFSWVTRRLMGKVSIPLITTNRINHPDVAEAV LADGCADMVSMARPFLADPAFVQKAASGRVDEINVCIGCNQACLDQIFEHKLTSCLVNPR ACHETELVLTATEKPKRLAVVGAGPAGLAFATTAAQRGHHVTLFDADNQIGGQFNIAKQI PGKEEFHETLRYFKRLLIIHNIQQRLGQRVEAADLSEFDEVILATGIVPRHLDLPGSDMP HVLSYTQVLRDKLPVGKRVAIIGAGGIGFDTAEYLSQFGQSTSLNSAAFAEEWGIDLQLK QRGGLAKDGMHPTHSPRKIYLLQRKTSKVGEGLGKTTGWIHRVSLQKRGVIMINGAQYHH IDEHGLHLIRDGQIECLPVDNVIICAGQESQQALLAPLQNMGKTVHLIGGADVARELDAR RAIDQGTRLALTI >gi|316918327|gb|ADCU01000016.1| GENE 300 326482 - 327012 401 176 aa, chain + ## HITS:1 COG:L125244 KEGG:ns NR:ns ## COG: L125244 COG1335 # Protein_GI_number: 15674036 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Lactococcus lactis # 2 149 16 167 176 83 32.0 2e-16 MSRVLLVVDMQKGVFSTPRMDRIGRVERINQLSRAAERVIFILHNEADLPLGSDEWELLP ELYQPEGSIYVDKTACDAFYRTTLADELAALDAKHITICGCATDYCVDTTIKNAASRGYA LTIAGDAHTTADRGSLKAEHLIPYFNEVWATLAIPGNRIEVKTTADILQEWGHSAG >gi|316918327|gb|ADCU01000016.1| GENE 301 327344 - 328660 793 438 aa, chain + ## HITS:1 COG:CC2681 KEGG:ns NR:ns ## COG: CC2681 COG0582 # Protein_GI_number: 16126915 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Caulobacter vibrioides # 4 416 22 415 432 161 31.0 3e-39 MAANLTETAIRGLKTKSMSYYEWSNSAQRGTGRLGVKVQPSGSKIFYFRYYVEKGKKEKF IQLGIWPEMKLVTANELAKKYGAWLVEGKEPQQELEQQRLAAQHIMQIHRSQGSFEELVH GYVNKMKLDNKRTWADVLKRLEKECYTVIPRETKAKDVTPLQIKTILSGIIQRDAVVHAN RIRSYLMAAFNYGLKADNDPMNTSVGITFGLEVNPVSAIPKQSSAEKVGDTWLTLEELRF VMEQFAQATNVGPLMQHLIRFCVYAGGQRPFEMIASQWSAIDWQQKTLLVIADVSKNKRE HLIPLTESALLELDSVKELTKESSSPYIFPLSTNNERPVRTDSLARSIMYFRAFNLEFKV FTARDLRRTCKTLMGEAGISKEIRDRIQNHALNDVSSKHYDRYDYLTEKRRALETWEDRI NHYQQQTESNVVSLFGRR >gi|316918327|gb|ADCU01000016.1| GENE 302 328665 - 329279 461 204 aa, chain + ## HITS:1 COG:no KEGG:YPK_0608 NR:ns ## KEGG: YPK_0608 # Name: not_defined # Def: filamentation induced by cAMP protein Fic # Organism: Y.pseudotuberculosis_YPIII # Pathway: not_defined # 1 204 1 204 204 364 88.0 1e-100 MAKYELNSAEELYQPGSGDLVLANKLEITDEEEMEALESGLLLMLYEQLFIEGQPPAALA FEHISCWHRQWLGNVYDWAGRLRNANLTKDGFQFAAADRIPLLLDGFEKQFLSRSGELKF LTRPELVRYLAECHVEFILNHPFREGNGRLSRLLCDVLSVLAGKGLLDYSLWDEHKAFYF KAIQAGVSGNYSPMMQLVSDILPD >gi|316918327|gb|ADCU01000016.1| GENE 303 329276 - 329422 153 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKKQITKTQIYRAVASSTAIETGVSVQKIEQQLKKNQERAKAVGLAR >gi|316918327|gb|ADCU01000016.1| GENE 304 329883 - 330359 268 158 aa, chain + ## HITS:1 COG:no KEGG:Dd1591_0921 NR:ns ## KEGG: Dd1591_0921 # Name: not_defined # Def: hypothetical protein # Organism: D.zeae # Pathway: not_defined # 3 140 125 255 336 64 29.0 1e-09 MCRYTYNGYAHGYWRIKATSVTRFADDHYVLVDMDTFKQNNNVAGAIAVYGRNDWDYLIF PDKIYRDKSEIFFDSNELSLQSKESIPDEKKEKKTRISRAERVALYVMLKEHYLDGNGEV NFSKIAGMLSITAKKQGVNVSFNDDTIANWIKRIENED Prediction of potential genes in microbial genomes Time: Wed May 18 15:27:51 2011 Seq name: gi|316918316|gb|ADCU01000017.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.17, whole genome shotgun sequence Length of sequence - 9531 bp Number of predicted genes - 11, with homology - 9 Number of transcription units - 7, operones - 1 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 2 - 61 3.6 1 1 Tu 1 . + CDS 114 - 269 95 ## + Term 397 - 429 2.4 + Prom 304 - 363 5.3 2 2 Tu 1 . + CDS 478 - 714 202 ## Dd1591_0922 phage transcriptional regulator, AlpA + Prom 1636 - 1695 6.5 3 3 Tu 1 . + CDS 1870 - 2289 186 ## SPAB_03316 hypothetical protein + Term 2486 - 2519 2.1 + Prom 2308 - 2367 5.4 4 4 Tu 1 . + CDS 2546 - 3244 201 ## SG0293 hypothetical protein 5 5 Op 1 11/0.000 + CDS 3591 - 3857 311 ## COG2801 Transposase and inactivated derivatives 6 5 Op 2 11/0.000 + CDS 3932 - 4708 252 ## COG2801 Transposase and inactivated derivatives 7 5 Op 3 11/0.000 + CDS 4751 - 5017 274 ## COG2801 Transposase and inactivated derivatives + Prom 5069 - 5128 3.1 8 5 Op 4 11/0.000 + CDS 5347 - 5850 157 ## COG2801 Transposase and inactivated derivatives + Prom 5995 - 6054 3.0 9 5 Op 5 . + CDS 6269 - 6463 142 ## COG2801 Transposase and inactivated derivatives - Term 7128 - 7162 0.9 10 6 Tu 1 . - CDS 7289 - 7453 66 ## - Prom 7495 - 7554 2.5 11 7 Tu 1 . + CDS 7732 - 8322 -61 ## BAA_2339 glycosyl transferase, group 2 family Predicted protein(s) >gi|316918316|gb|ADCU01000017.1| GENE 1 114 - 269 95 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLKEHYLDGNGEVNFSKIAGMLSITAKKQGVNVSFNDDTIANWIKRIENED >gi|316918316|gb|ADCU01000017.1| GENE 2 478 - 714 202 78 aa, chain + ## HITS:1 COG:no KEGG:Dd1591_0922 NR:ns ## KEGG: Dd1591_0922 # Name: not_defined # Def: phage transcriptional regulator, AlpA # Organism: D.zeae # Pathway: not_defined # 1 78 1 78 78 116 79.0 2e-25 MSTTSIIPTPEQRLKILHVYGEKGDRLVREKERKYITTISRSTAWKLEKAGKFPRRKSLG AKSCGWLLSDLLYWINKK >gi|316918316|gb|ADCU01000017.1| GENE 3 1870 - 2289 186 139 aa, chain + ## HITS:1 COG:no KEGG:SPAB_03316 NR:ns ## KEGG: SPAB_03316 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Paratyphi_B # Pathway: not_defined # 1 136 274 414 417 100 36.0 2e-20 MFITPDSPIITEETFKSASQISQWLLNHSITKIEATREPTDAEKLMRYFDENIINNGSYD FRRNHIIKKGPYSVRCSEKLNPALDKLENDGMVQLFQSGGVNYIKVIGSTISPLKLAEAL GVPIADSGSITMNKLPRVE >gi|316918316|gb|ADCU01000017.1| GENE 4 2546 - 3244 201 232 aa, chain + ## HITS:1 COG:no KEGG:SG0293 NR:ns ## KEGG: SG0293 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Gallinarum # Pathway: not_defined # 1 202 1 202 277 237 58.0 2e-61 MKSQYSLSSEEIDELVAIAFSMYSSPINPDILNALLKMVYDMLEQHNRIFAIRTDLRFAQ SHVPGEPDLPLCFQRDNVQAITRFSESLKSQLRADHHRSMRPGNPTLPSYGWCRERDTGE HPHYHLVLLFNRDVYTYLGNYQERDADNMATRIQKAWCSAIGLHHDDYATLAEFPPNPVY RFSRNDALERSPVYWDFLVRLAYLAKTRTKDNYGGYRNFGTSQCVRLGGLAC >gi|316918316|gb|ADCU01000017.1| GENE 5 3591 - 3857 311 88 aa, chain + ## HITS:1 COG:STM2765 KEGG:ns NR:ns ## COG: STM2765 COG2801 # Protein_GI_number: 16766077 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 1 88 1 88 88 135 87.0 1e-32 MRKARFTEHQIIAVLKSVEAGRTVRDVCREAAISEVSYYNWKAKYGGMEAADIKKIKDLE DENRRLKQMFADLSLECRALKDVIEKKL >gi|316918316|gb|ADCU01000017.1| GENE 6 3932 - 4708 252 258 aa, chain + ## HITS:1 COG:STM2764 KEGG:ns NR:ns ## COG: STM2764 COG2801 # Protein_GI_number: 16766076 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 25 179 1 155 155 267 81.0 2e-71 MLSLSRTVFFYQPDTRRDEPVVQALTEAAERYPRYGFKKLFQVIRRQGHAWDHKRIHRIY CLLKLNFRRKGKQRLPVRNPAPLAIPEALNQCWSIDFMHDALVCGRRFRTFNVVDDFNRE ALKIEIDLNIPAQRVVRVLDRIVANRGYTLKMRMDNGPELVSVALAQWAEEHGVMLEFIK PGKPTQNAFIERFNRTYRTEVLDFYLFRTLDEAREITEHWLMEYNSERPHESLNNLTPEE YRLMAENDLFPSFSTVVK >gi|316918316|gb|ADCU01000017.1| GENE 7 4751 - 5017 274 88 aa, chain + ## HITS:1 COG:YPCD1.93 KEGG:ns NR:ns ## COG: YPCD1.93 COG2801 # Protein_GI_number: 16082776 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 88 1 88 88 134 98.0 3e-32 MKKTRYTEEQIAFALKQAETGTRVEEVCRKMGISEATFYNWKKKFGGMGVTELRRLRQLE EENQRLKRLVADLSLDKEMLQDVIRKKF >gi|316918316|gb|ADCU01000017.1| GENE 8 5347 - 5850 157 167 aa, chain + ## HITS:1 COG:YPCD1.94 KEGG:ns NR:ns ## COG: YPCD1.94 COG2801 # Protein_GI_number: 16082777 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 5 167 107 269 269 313 91.0 1e-85 MLVADQCWSMDFVADNLFNGRRIRALTIVDNFSRECLAIEVGQGLRGENVVAVLERLKLS WGRVPQRLQTDNGSEFISKSMDRWAYENQVTMDFSRPGKPTDNAFIESFNGSLRDECLNV HWFLSLEDAQEKIECWRQEYNHFRPHSSLNNLTPAEFARSHQKGPDL >gi|316918316|gb|ADCU01000017.1| GENE 9 6269 - 6463 142 64 aa, chain + ## HITS:1 COG:PA0978 KEGG:ns NR:ns ## COG: PA0978 COG2801 # Protein_GI_number: 15596175 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Pseudomonas aeruginosa # 1 56 212 267 275 62 53.0 2e-10 MERVFRSLKSEWIPKGGYGYFSHAVSDINQWINGYYNAYRPHTNNGGLPPCLHEEKWKQV IPVS >gi|316918316|gb|ADCU01000017.1| GENE 10 7289 - 7453 66 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYQLFPQFCRLRRKRVYSQTCHRIGLVPSFGYVKNQSIDRDIIYQVPSFAQKTP >gi|316918316|gb|ADCU01000017.1| GENE 11 7732 - 8322 -61 196 aa, chain + ## HITS:1 COG:no KEGG:BAA_2339 NR:ns ## KEGG: BAA_2339 # Name: not_defined # Def: glycosyl transferase, group 2 family # Organism: B.anthracis_A0248 # Pathway: not_defined # 3 141 216 370 406 90 35.0 3e-17 MPRYAFYCAQSYHDAAVQDEKNRSELYSRSIEWYLLRLKLSGFTEERYFSLLRIGLIHER SGRISDAIPFLLEAFEENPLRAESLYHLARIYRSLGKNNLAFRFAKMAKEIKKPIGNFLF LDNVIYDNWIDYEIMVNAIEIGLYPIAYHSARELLTFGTNPSATSKATEIINFLISRSLI TVVDQDIIKKSTKNSV Prediction of potential genes in microbial genomes Time: Wed May 18 15:28:11 2011 Seq name: gi|316918312|gb|ADCU01000018.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.18, whole genome shotgun sequence Length of sequence - 3894 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 955 - 1662 47 ## Kvar_0797 type IV pilus assembly PilZ - Prom 1697 - 1756 7.3 + Prom 1769 - 1828 10.1 2 2 Op 1 23/0.000 + CDS 1882 - 2277 342 ## COG2963 Transposase and inactivated derivatives 3 2 Op 2 . + CDS 2280 - 3116 154 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|316918312|gb|ADCU01000018.1| GENE 1 955 - 1662 47 235 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0797 NR:ns ## KEGG: Kvar_0797 # Name: not_defined # Def: type IV pilus assembly PilZ # Organism: K.variicola # Pathway: not_defined # 9 223 10 224 234 89 32.0 8e-17 MHQLDINDKYEKIAILRDEMKKKTSGVMVVEGGEVGVARISNVGVGVDSFSFYCEDSFII NEVIELKLYSDIGQINILSKSIGRYGAQGEYMEASIPIKMIITQRRKERRFTLRKIDNFY CYGKFRNGESYRYDISDISLGGCALISFQPNMRFLVDGGILKNSVISLPKKVSLNISLRI ASISYNTIIHDDKIINFVTKISCEFLFQNDYQRNTINQVILDLTNNIRKGHNRYY >gi|316918312|gb|ADCU01000018.1| GENE 2 1882 - 2277 342 131 aa, chain + ## HITS:1 COG:yi21_g3 KEGG:ns NR:ns ## COG: yi21_g3 COG2963 # Protein_GI_number: 16129938 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 14 131 19 136 136 164 75.0 4e-41 MSNTNANFEMTGILLGQEVRKRKTPQEKIAIIQQTMEPGMNVSHVARLHGIQPSLLFKWK KQYQEGSLTAVAAGEEVVPASELTAALKQVRELQRLLGKKTMEVEILKEAVEYGQSRKWI AHAPLLPKDGE >gi|316918312|gb|ADCU01000018.1| GENE 3 2280 - 3116 154 278 aa, chain + ## HITS:1 COG:ECs1564 KEGG:ns NR:ns ## COG: ECs1564 COG2801 # Protein_GI_number: 15830818 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 274 16 288 301 343 62.0 2e-94 MVSRTMGVSRAQLSLRINRSADWQDRRCNRRNEEADAEILSAILNIISDMPSYGYRRVWG ILRKQRRTEGQPPVNAKRLYRIMSEHNLLLLHHKPERPKREHKGKIAVAESDMRWCSDGF EFGCDNGEKLRVTFALDCCDREAIDWAASTGGYDSSTVQDVMLRSVEKRFGDRLPDTAVQ WLTDNGSAYTAYETRRFARELNLEPCTTAVSSPQSNGMAERFVKTMKEDYIAFMPKPDVR TALRNLAVAFTHYNENHPHSALGYHSPREYRRQRTSLT Prediction of potential genes in microbial genomes Time: Wed May 18 15:28:16 2011 Seq name: gi|316918308|gb|ADCU01000019.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.19, whole genome shotgun sequence Length of sequence - 4081 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.000 - CDS 665 - 1954 166 ## COG2200 FOG: EAL domain - Prom 1981 - 2040 3.5 - Term 2625 - 2659 1.0 2 1 Op 2 . - CDS 2831 - 3721 571 ## COG3468 Type V secretory pathway, adhesin AidA 3 1 Op 3 . - CDS 3709 - 4068 147 ## CPF_2923 cell wall surface anchor family protein Predicted protein(s) >gi|316918308|gb|ADCU01000019.1| GENE 1 665 - 1954 166 429 aa, chain - ## HITS:1 COG:PA2133 KEGG:ns NR:ns ## COG: PA2133 COG2200 # Protein_GI_number: 15597329 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Pseudomonas aeruginosa # 159 397 23 259 285 115 33.0 2e-25 MFNNRFQSTDFIIIWISNLGDIAAAFGPETHLQCISVVRQRLIDGGLPAVAIELQDEVVT IDLSMLPTNVLSEVTHVENYSTDRQEDKLAQFLFAIVGAECIDTIQGQVYLRVEVKFLRI NGTQYGFTDRSSFLAEQSTRRPALVPGILTAWCQRFRSDMKHAANLLNGLRNGSLILVFQ PIVHFINGETVCIYSEALLRHIAEPTYAPEDAINALERLKLISHLDYSVVSTILQLLRYQ PNQHIAANISAVSLNNNAFWHHLIEQLEEMPDIASRLILEITETAEISKISDAIRLLGLL KKTGVRIALDDVGTGMTTLEFIAIAHADIIKIDRSVLQRSSISCSGVESSELANLVCLCK NYAGLVVVEGIETSEQLNQAIGPARANGVQGYLISRPEVQAGWMKTAPCHVVDVYNQFLS SQLEVILRN >gi|316918308|gb|ADCU01000019.1| GENE 2 2831 - 3721 571 296 aa, chain - ## HITS:1 COG:STM3757_2 KEGG:ns NR:ns ## COG: STM3757_2 COG3468 # Protein_GI_number: 16767041 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Salmonella typhimurium LT2 # 1 296 193 496 496 206 38.0 4e-53 MFNMTLHDRIGESGLVKTTAEDELASSLWIRSTGKRTESNSSGQLDTRIYDTTIELGGDI ARWDTNQQRYHLGLMAGYGNSNNKTTSSVTDYQSKGKLSGYSVGMYLTWFENALDNSGWY TDSWLRWNDFNASVSGDQLSKEDYKLRGITGSLESGYAWRVAGNDKTSFWLTPQAQVTYL GVTSNDFTEKTGTNIKGNKDAVESRLGVRASTTTHTSGTFIQPYVELNYRNLNRLQSPNL DGQRAAAIGGKNSFETKAGVETTISDNTRLWANVSYVTGNKDFNSYQGMIGINVKF >gi|316918308|gb|ADCU01000019.1| GENE 3 3709 - 4068 147 119 aa, chain - ## HITS:1 COG:no KEGG:CPF_2923 NR:ns ## KEGG: CPF_2923 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: C.perfringens_ATCC13124 # Pathway: not_defined # 2 87 622 707 746 86 50.0 2e-16 MKPGQQVKPGLRVKPGLQVKPGLRVKPGQQVKPGQQVKPGLRVKPGQQVKPGLRVKPGLR VKPGLRVKPGLRVKPGLRVKPGQQVKPVLRAELAAIPLYYGQRVQAMPRMPGVLIICLI Prediction of potential genes in microbial genomes Time: Wed May 18 15:29:54 2011 Seq name: gi|316918029|gb|ADCU01000020.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.20, whole genome shotgun sequence Length of sequence - 311285 bp Number of predicted genes - 284, with homology - 267 Number of transcription units - 180, operones - 59 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 2225 - 2284 9.2 2 2 Op 1 . + CDS 2461 - 2673 131 ## NT01EI_2881 hypothetical protein 3 2 Op 2 . + CDS 2725 - 3372 143 ## Dd1591_1976 transposase IS4 family protein + Term 3402 - 3439 0.4 + Prom 3769 - 3828 5.2 4 3 Tu 1 . + CDS 3892 - 4764 468 ## COG3596 Predicted GTPase + Term 4784 - 4828 15.2 + Prom 4770 - 4829 3.0 5 4 Tu 1 . + CDS 4849 - 5670 596 ## JW2614 hypothetical protein + Prom 5809 - 5868 1.9 6 5 Tu 1 . + CDS 5907 - 6620 269 ## COG2378 Predicted transcriptional regulator + Term 6716 - 6768 -0.0 + Prom 6684 - 6743 1.8 7 6 Tu 1 . + CDS 6783 - 7244 332 ## ECO111_0314 hypothetical protein - Term 7236 - 7291 10.1 8 7 Tu 1 . - CDS 7379 - 7555 138 ## + Prom 7267 - 7326 3.4 9 8 Tu 1 . + CDS 7554 - 7940 245 ## ECO103_5083 hypothetical protein + Term 7959 - 7992 4.5 + Prom 7969 - 8028 1.8 10 9 Op 1 . + CDS 8172 - 8651 296 ## COG2003 DNA repair proteins + Prom 8658 - 8717 2.2 11 9 Op 2 . + CDS 8740 - 9060 222 ## JW0234 toxin of the YkfI-YafW toxin-antitoxin system + Term 9125 - 9163 4.0 + Prom 9062 - 9121 5.9 12 10 Tu 1 . + CDS 9174 - 10007 386 ## XBJ1_1836 hypothetical protein + Term 10066 - 10117 1.4 - TRNA 10110 - 10185 93.9 # Met CAT 0 0 + Prom 10236 - 10295 4.1 13 11 Tu 1 . + CDS 10325 - 10819 403 ## COG3663 G:T/U mismatch-specific DNA glycosylase + Term 10847 - 10873 0.1 - Term 10828 - 10869 5.6 14 12 Op 1 31/0.000 - CDS 10887 - 12719 2092 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Prom 12875 - 12934 2.3 15 12 Op 2 8/0.093 - CDS 12988 - 14736 1396 ## COG0358 DNA primase (bacterial type) - Prom 14787 - 14846 2.1 - Term 14891 - 14931 4.2 16 13 Tu 1 . - CDS 14952 - 15167 357 ## PROTEIN SUPPORTED gi|15803607|ref|NP_289640.1| 30S ribosomal protein S21 - Prom 15230 - 15289 3.9 + Prom 15137 - 15196 3.5 17 14 Tu 1 . + CDS 15406 - 16461 674 ## PROTEIN SUPPORTED gi|229879751|ref|ZP_04499249.1| (SSU ribosomal protein S18P)-alanine acetyltransferase + Term 16478 - 16520 10.4 - Term 16471 - 16502 4.1 18 15 Tu 1 . - CDS 16508 - 17167 386 ## COG0344 Predicted membrane protein - Prom 17212 - 17271 3.7 + Prom 17174 - 17233 4.0 19 16 Tu 1 . + CDS 17321 - 17677 412 ## COG1539 Dihydroneopterin aldolase + Term 17756 - 17785 1.2 + Prom 17749 - 17808 2.1 20 17 Tu 1 . + CDS 17864 - 18634 717 ## COG1968 Uncharacterized bacitracin resistance protein + Term 18659 - 18693 3.3 - Term 18647 - 18681 3.3 21 18 Tu 1 . - CDS 18698 - 19975 1118 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Prom 20046 - 20105 5.3 - Term 20070 - 20111 4.3 22 19 Tu 1 . - CDS 20120 - 20737 537 ## COG3103 SH3 domain protein - Prom 20879 - 20938 4.9 - Term 20866 - 20905 6.1 23 20 Op 1 21/0.000 - CDS 20958 - 22223 1179 ## COG0306 Phosphate/sulphate permeases 24 20 Op 2 . - CDS 22276 - 22956 719 ## COG1392 Phosphate transport regulator (distant homolog of PhoU) - Prom 23003 - 23062 2.9 + Prom 23023 - 23082 5.3 25 21 Tu 1 . + CDS 23104 - 24420 1092 ## COG3025 Uncharacterized conserved protein 26 22 Op 1 . + CDS 24545 - 27388 2092 ## COG1391 Glutamine synthetase adenylyltransferase + Prom 27392 - 27451 4.7 27 22 Op 2 . + CDS 27474 - 27719 208 ## CJA_3183 CcdB antidote CcdA 28 23 Tu 1 . + CDS 27824 - 28039 141 ## 29 24 Tu 1 . - CDS 28097 - 29026 803 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 29060 - 29119 2.3 + Prom 29048 - 29107 3.1 30 25 Op 1 1/0.791 + CDS 29134 - 30564 1286 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 31 25 Op 2 . + CDS 30595 - 31839 1044 ## COG0531 Amino acid transporters + Term 31887 - 31916 2.1 - Term 31870 - 31910 6.8 32 26 Tu 1 . - CDS 31929 - 32204 433 ## COG2960 Uncharacterized protein conserved in bacteria 33 27 Tu 1 . + CDS 32710 - 33363 859 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase + Term 33381 - 33423 11.3 - Term 33370 - 33411 5.6 34 28 Tu 1 . - CDS 33425 - 34198 749 ## COG0428 Predicted divalent heavy-metal cations transporter - Prom 34225 - 34284 2.7 + Prom 34189 - 34248 3.7 35 29 Tu 1 . + CDS 34451 - 35236 849 ## COG3384 Uncharacterized conserved protein + Term 35252 - 35286 7.4 36 30 Tu 1 . - CDS 35352 - 36572 965 ## COG0477 Permeases of the major facilitator superfamily - Term 36744 - 36784 4.1 37 31 Op 1 5/0.279 - CDS 36804 - 38639 1670 ## COG4264 Siderophore synthetase component 38 31 Op 2 5/0.279 - CDS 38636 - 39238 451 ## PROTEIN SUPPORTED gi|227380191|ref|ZP_03863647.1| acetyltransferase, ribosomal protein N-acetylase 39 31 Op 3 1/0.791 - CDS 39235 - 40575 1071 ## COG3486 Lysine/ornithine N-monooxygenase - Prom 40692 - 40751 4.3 - Term 40714 - 40749 3.8 40 32 Tu 1 . - CDS 40765 - 42939 2047 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 41 33 Tu 1 6/0.186 - CDS 43396 - 43773 181 ## COG3152 Predicted membrane protein - Prom 43818 - 43877 3.8 42 34 Tu 1 . - CDS 43880 - 44269 193 ## COG3152 Predicted membrane protein - Prom 44318 - 44377 2.7 43 35 Tu 1 . - CDS 44383 - 45174 399 ## COG4114 Uncharacterized Fe-S protein - Prom 45336 - 45395 4.6 44 36 Tu 1 . - CDS 45445 - 46080 413 ## COG2199 FOG: GGDEF domain - Prom 46168 - 46227 8.9 45 37 Tu 1 . + CDS 46798 - 47100 195 ## - TRNA 47204 - 47290 66.7 # Leu CAG 0 0 - TRNA 47340 - 47426 66.7 # Leu CAG 0 0 - TRNA 47461 - 47547 69.2 # Leu CAG 0 0 46 38 Tu 1 . - CDS 47787 - 48827 257 ## PROTEIN SUPPORTED gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative - Prom 48993 - 49052 5.1 + Prom 48931 - 48990 3.1 47 39 Op 1 8/0.093 + CDS 49036 - 49446 242 ## COG3050 DNA polymerase III, psi subunit 48 39 Op 2 1/0.791 + CDS 49415 - 49882 290 ## PROTEIN SUPPORTED gi|91774768|ref|YP_544524.1| SSU ribosomal protein S18P alanine acetyltransferase + Prom 49892 - 49951 4.8 49 40 Tu 1 . + CDS 50042 - 51631 1771 ## COG4108 Peptide chain release factor RF-3 + Term 51673 - 51701 1.0 50 41 Tu 1 . + CDS 52156 - 52770 765 ## COG2823 Predicted periplasmic or secreted lipoprotein + Prom 52811 - 52870 3.5 51 42 Tu 1 . + CDS 52898 - 53059 236 ## COG5487 Small integral membrane protein 52 43 Op 1 . + CDS 53171 - 53359 120 ## Spro_0655 hypothetical protein 53 43 Op 2 4/0.326 + CDS 53370 - 54584 820 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily 54 43 Op 3 2/0.628 + CDS 54581 - 55396 381 ## COG0084 Mg-dependent DNase + Prom 55488 - 55547 4.6 55 44 Tu 1 . + CDS 55612 - 56889 1379 ## COG1972 Nucleoside permease + Term 56902 - 56940 7.6 56 45 Tu 1 . - CDS 56932 - 57465 436 ## ETAE_0439 hypothetical protein - Term 57479 - 57516 6.2 57 46 Op 1 4/0.326 - CDS 57587 - 59086 1404 ## COG2721 Altronate dehydratase 58 46 Op 2 3/0.465 - CDS 59105 - 60580 1311 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Prom 60626 - 60685 4.8 - Term 60653 - 60681 2.1 59 47 Tu 1 . - CDS 60690 - 62102 1263 ## COG1904 Glucuronate isomerase - Prom 62319 - 62378 3.4 + Prom 62587 - 62646 1.6 60 48 Tu 1 . + CDS 62728 - 64023 1392 ## COG0477 Permeases of the major facilitator superfamily + Term 64053 - 64085 3.0 + Prom 64042 - 64101 2.8 61 49 Tu 1 . + CDS 64209 - 64982 621 ## COG2186 Transcriptional regulators + Term 64987 - 65038 2.1 62 50 Tu 1 . + CDS 65346 - 65741 365 ## COG0239 Integral membrane protein possibly involved in chromosome condensation + Term 65754 - 65803 -1.0 63 51 Op 1 . + CDS 66165 - 66494 117 ## ETAE_0431 putative lipoprotein 64 51 Op 2 . + CDS 66587 - 67264 604 ## COG0586 Uncharacterized membrane-associated protein 65 51 Op 3 . + CDS 67266 - 67667 291 ## ETAE_0429 hypothetical protein + Term 67672 - 67714 9.2 + Prom 67721 - 67780 5.8 66 52 Tu 1 . + CDS 67931 - 68320 427 ## ROD_47901 hypothetical protein + Prom 68369 - 68428 1.9 67 53 Op 1 7/0.140 + CDS 68457 - 68762 391 ## COG4575 Uncharacterized conserved protein 68 53 Op 2 . + CDS 68762 - 69163 368 ## COG5393 Predicted membrane protein 69 53 Op 3 . + CDS 69160 - 69453 225 ## YE3717 hypothetical protein + Prom 69515 - 69574 5.8 70 54 Tu 1 . + CDS 69755 - 70150 436 ## COG2259 Predicted membrane protein + Term 70204 - 70240 6.2 + Prom 70179 - 70238 2.0 71 55 Tu 1 . + CDS 70286 - 71272 906 ## COG0435 Predicted glutathione S-transferase + Term 71401 - 71435 3.1 72 56 Tu 1 . - CDS 71533 - 72261 356 ## COG1180 Pyruvate-formate lyase-activating enzyme 73 57 Tu 1 . + CDS 72266 - 72457 78 ## + Term 72468 - 72505 -0.1 - Term 72310 - 72341 3.2 74 58 Tu 1 . - CDS 72368 - 73930 1287 ## ECUMN_5004 hypothetical protein - Prom 74142 - 74201 3.6 75 59 Tu 1 7/0.140 + CDS 74376 - 75155 857 ## COG0274 Deoxyribose-phosphate aldolase + Term 75181 - 75238 2.2 76 60 Tu 1 4/0.326 + CDS 75388 - 76710 1434 ## COG0213 Thymidine phosphorylase 77 61 Op 1 9/0.093 + CDS 76819 - 78042 1326 ## COG1015 Phosphopentomutase + Term 78050 - 78093 9.0 78 61 Op 2 . + CDS 78137 - 78871 890 ## COG0813 Purine-nucleoside phosphorylase + Term 78898 - 78926 2.3 - Term 78886 - 78914 2.3 79 62 Tu 1 . - CDS 78994 - 80244 730 ## ESA_00658 hypothetical protein - Prom 80264 - 80323 3.6 + Prom 80223 - 80282 2.5 80 63 Tu 1 . + CDS 80399 - 81442 610 ## PC1_0654 hypothetical protein + Term 81480 - 81511 3.4 - Term 81460 - 81506 13.7 81 64 Tu 1 . - CDS 81534 - 82940 1282 ## COG0477 Permeases of the major facilitator superfamily - Prom 83110 - 83169 6.2 + Prom 82873 - 82932 1.7 82 65 Tu 1 . + CDS 82977 - 83204 93 ## + Term 83207 - 83241 -0.8 - Term 83250 - 83280 0.2 83 66 Tu 1 . - CDS 83317 - 84471 1339 ## COG0192 S-adenosylmethionine synthetase 84 67 Tu 1 . - CDS 84675 - 84812 57 ## - Prom 84978 - 85037 3.0 + Prom 85308 - 85367 4.3 85 68 Op 1 . + CDS 85515 - 87491 1899 ## COG1166 Arginine decarboxylase (spermidine biosynthesis) + Term 87549 - 87577 1.0 + Prom 87497 - 87556 5.8 86 68 Op 2 . + CDS 87621 - 88520 693 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) + Term 88578 - 88623 12.0 + Prom 88563 - 88622 2.7 87 69 Tu 1 . + CDS 88675 - 89595 915 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family + Term 89619 - 89652 5.2 88 70 Tu 1 . - CDS 89643 - 89795 62 ## + Prom 89989 - 90048 11.4 89 71 Op 1 . + CDS 90090 - 90791 429 ## Maqu_2145 hypothetical protein 90 71 Op 2 8/0.093 + CDS 90828 - 91442 420 ## COG1704 Uncharacterized conserved protein 91 71 Op 3 . + CDS 91453 - 92421 337 ## COG1512 Beta-propeller domains of methanol dehydrogenase type + Term 92490 - 92526 2.3 + Prom 92545 - 92604 3.3 92 72 Op 1 5/0.279 + CDS 92767 - 93360 314 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 93 72 Op 2 16/0.000 + CDS 93409 - 95820 2094 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 94 72 Op 3 12/0.023 + CDS 95833 - 96735 833 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 95 72 Op 4 . + CDS 96728 - 97387 699 ## COG2864 Cytochrome b subunit of formate dehydrogenase + Term 97402 - 97443 3.0 + Prom 97497 - 97556 5.0 96 73 Tu 1 . + CDS 97647 - 98567 483 ## COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain + Term 98639 - 98667 2.3 + Prom 98728 - 98787 4.7 97 74 Op 1 . + CDS 98811 - 100088 1061 ## COG0439 Biotin carboxylase 98 74 Op 2 . + CDS 100122 - 100706 557 ## COG1335 Amidases related to nicotinamidase 99 74 Op 3 4/0.326 + CDS 100728 - 101741 861 ## COG0309 Hydrogenase maturation factor + Term 101877 - 101920 2.0 + Prom 101884 - 101943 3.1 100 75 Op 1 . + CDS 101973 - 104291 1443 ## COG0068 Hydrogenase maturation factor 101 75 Op 2 . + CDS 104296 - 105624 848 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases + Term 105627 - 105660 -1.0 102 75 Op 3 . + CDS 105719 - 106678 795 ## Ccel_0416 protein of unknown function DUF6 transmembrane + Term 106715 - 106753 5.1 103 76 Tu 1 . - CDS 106759 - 107511 832 ## COG0501 Zn-dependent protease with chaperone function - Prom 107570 - 107629 6.4 - Term 107659 - 107692 3.2 104 77 Tu 1 . - CDS 107701 - 108456 769 ## COG0501 Zn-dependent protease with chaperone function - Prom 108501 - 108560 5.9 + Prom 108614 - 108673 2.5 105 78 Tu 1 . + CDS 108708 - 110702 1934 ## COG0021 Transketolase + Term 110723 - 110766 10.8 + Prom 110829 - 110888 5.7 106 79 Op 1 26/0.000 + CDS 111025 - 112068 459 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 107 79 Op 2 9/0.093 + CDS 112109 - 113272 1296 ## COG0126 3-phosphoglycerate kinase + Term 113280 - 113316 7.1 + Prom 113327 - 113386 2.3 108 80 Tu 1 4/0.326 + CDS 113414 - 114493 1092 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 114532 - 114587 16.2 109 81 Tu 1 . + CDS 114881 - 115747 1000 ## COG0668 Small-conductance mechanosensitive channel + Term 115764 - 115792 0.7 + Prom 116176 - 116235 3.7 110 82 Tu 1 . + CDS 116287 - 116904 563 ## COG1279 Lysine efflux permease + Prom 116953 - 117012 5.6 111 83 Tu 1 . + CDS 117074 - 117793 732 ## COG2968 Uncharacterized conserved protein + Term 117816 - 117845 2.1 - Term 117804 - 117833 2.1 112 84 Tu 1 . - CDS 117858 - 118751 795 ## COG0583 Transcriptional regulator - Prom 118793 - 118852 3.0 + Prom 118868 - 118927 3.3 113 85 Tu 1 . + CDS 118960 - 119619 737 ## COG0120 Ribose 5-phosphate isomerase + Term 119697 - 119730 5.4 + Prom 119923 - 119982 4.0 114 86 Tu 1 . + CDS 120051 - 121289 1061 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Term 121310 - 121351 10.4 - Term 121302 - 121334 5.0 115 87 Tu 1 . - CDS 121445 - 121948 221 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 116 88 Tu 1 . - CDS 122409 - 122738 342 ## COG3027 Uncharacterized protein conserved in bacteria - Prom 122796 - 122855 3.8 + Prom 122780 - 122839 3.0 117 89 Tu 1 . + CDS 122928 - 123506 563 ## COG3079 Uncharacterized protein conserved in bacteria + Term 123520 - 123555 4.1 + Prom 123654 - 123713 3.2 118 90 Op 1 8/0.093 + CDS 123826 - 125148 1245 ## COG0006 Xaa-Pro aminopeptidase 119 90 Op 2 8/0.093 + CDS 125164 - 126342 991 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases + Prom 126350 - 126409 1.9 120 91 Tu 1 5/0.279 + CDS 126429 - 127634 1031 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases + Term 127812 - 127848 -0.4 121 92 Op 1 18/0.000 + CDS 128116 - 129213 1170 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) + Prom 129293 - 129352 6.6 122 92 Op 2 12/0.023 + CDS 129372 - 129758 589 ## COG0509 Glycine cleavage system H protein (lipoate-binding) + Term 129817 - 129871 6.3 123 93 Tu 1 . + CDS 129907 - 132789 2993 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain + Term 132822 - 132869 11.0 - Term 132806 - 132856 5.6 124 94 Tu 1 . - CDS 132885 - 133757 345 ## COG0583 Transcriptional regulator - Prom 133779 - 133838 4.1 125 95 Op 1 3/0.465 + CDS 133861 - 134643 612 ## COG3527 Alpha-acetolactate decarboxylase 126 95 Op 2 . + CDS 134673 - 136349 1314 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] + Term 136376 - 136418 2.6 127 96 Tu 1 . - CDS 136483 - 136617 85 ## - Prom 136756 - 136815 4.2 128 97 Tu 1 . + CDS 136875 - 138275 913 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 129 98 Tu 1 . - CDS 138458 - 139108 644 ## COG1272 Predicted membrane protein, hemolysin III homolog - Prom 139149 - 139208 6.5 + Prom 139594 - 139653 4.6 130 99 Tu 1 . + CDS 139756 - 140640 805 ## COG3248 Nucleoside-binding outer membrane protein + Term 140657 - 140700 3.7 + Prom 140666 - 140725 2.2 131 100 Tu 1 . + CDS 140844 - 141668 840 ## COG0169 Shikimate 5-dehydrogenase - Term 142154 - 142209 6.5 132 101 Tu 1 . - CDS 142333 - 143319 874 ## COG0354 Predicted aminomethyltransferase related to GcvT - Prom 143353 - 143412 3.0 + Prom 143580 - 143639 3.8 133 102 Op 1 . + CDS 143694 - 143960 267 ## COG2938 Uncharacterized conserved protein 134 102 Op 2 . + CDS 143941 - 144354 160 ## Spro_3897 hypothetical protein + Term 144362 - 144398 2.1 - Term 144350 - 144384 1.1 135 103 Tu 1 . - CDS 144403 - 144921 550 ## COG0716 Flavodoxins - Prom 145040 - 145099 3.8 + Prom 145027 - 145086 3.5 136 104 Op 1 8/0.093 + CDS 145126 - 146025 586 ## COG4974 Site-specific recombinase XerD 137 104 Op 2 7/0.140 + CDS 146054 - 146770 771 ## COG1651 Protein-disulfide isomerase 138 104 Op 3 5/0.279 + CDS 146776 - 148509 1463 ## COG0608 Single-stranded DNA-specific exonuclease + Term 148539 - 148576 6.2 139 105 Op 1 8/0.093 + CDS 149168 - 150049 876 ## COG1186 Protein chain release factor B 140 105 Op 2 1/0.791 + CDS 150059 - 151576 1791 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 151592 - 151659 7.7 + TRNA 151909 - 151982 78.8 # Gly CCC 0 0 + Prom 151909 - 151968 76.6 141 106 Tu 1 . + CDS 152146 - 153324 404 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 142 107 Tu 1 . + CDS 154133 - 156160 438 ## AHA_2063 hypothetical protein + Prom 156512 - 156571 2.2 143 108 Tu 1 . + CDS 156697 - 157152 127 ## plu4461 hypothetical protein + Term 157333 - 157376 4.6 144 109 Tu 1 . - CDS 157942 - 158193 315 ## Dd586_2860 protein of unknown function DUF1471 - Prom 158261 - 158320 3.0 145 110 Tu 1 . - CDS 158331 - 159107 527 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases - Prom 159143 - 159202 4.4 + Prom 159113 - 159172 3.7 146 111 Tu 1 . + CDS 159256 - 160149 451 ## COG0583 Transcriptional regulator + Term 160209 - 160244 -0.9 147 112 Op 1 2/0.628 - CDS 160184 - 161173 1007 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 148 112 Op 2 . - CDS 161200 - 162051 706 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 162075 - 162134 1.9 149 113 Tu 1 . - CDS 162960 - 164024 854 ## LF82_p248 hypothetical protein - Prom 164048 - 164107 5.6 150 114 Op 1 1/0.791 - CDS 164132 - 164716 258 ## COG0716 Flavodoxins 151 114 Op 2 1/0.791 - CDS 164726 - 165487 660 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 152 114 Op 3 . - CDS 165465 - 165944 290 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Prom 165980 - 166039 1.8 153 115 Op 1 . - CDS 166049 - 166699 244 ## Dd586_2855 hypothetical protein 154 115 Op 2 . - CDS 166751 - 167407 373 ## COG0716 Flavodoxins 155 115 Op 3 40/0.000 - CDS 167472 - 168929 678 ## COG0642 Signal transduction histidine kinase 156 115 Op 4 . - CDS 168944 - 169624 654 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 157 115 Op 5 . - CDS 169639 - 170805 836 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 158 115 Op 6 . - CDS 170856 - 171062 109 ## - Prom 171084 - 171143 5.0 + Prom 170811 - 170870 2.7 159 116 Tu 1 . + CDS 171061 - 172110 841 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 172120 - 172156 7.3 - Term 172198 - 172235 1.5 160 117 Tu 1 . - CDS 172241 - 173443 451 ## COG0477 Permeases of the major facilitator superfamily - Prom 173468 - 173527 3.7 161 118 Tu 1 . - CDS 173599 - 174210 217 ## Pecwa_1393 hypothetical protein 162 119 Tu 1 . - CDS 174928 - 175461 305 ## Pecwa_1391 hypothetical protein 163 120 Op 1 . - CDS 175562 - 175774 233 ## COG3311 Predicted transcriptional regulator 164 120 Op 2 . - CDS 175873 - 176454 151 ## PC1_2879 hypothetical protein - Prom 176624 - 176683 8.2 165 121 Op 1 . + CDS 177072 - 177824 333 ## PC1_2881 hypothetical protein + Term 177870 - 177905 5.0 + Prom 177826 - 177885 2.9 166 121 Op 2 . + CDS 177924 - 178787 556 ## COG3596 Predicted GTPase + Term 178817 - 178854 8.4 167 122 Tu 1 . + CDS 178881 - 179705 504 ## JW2614 hypothetical protein + Prom 179821 - 179880 4.2 168 123 Op 1 . + CDS 179914 - 180624 263 ## COG2378 Predicted transcriptional regulator 169 123 Op 2 . + CDS 180650 - 181186 524 ## SG0278 hypothetical protein 170 123 Op 3 . + CDS 181228 - 181665 353 ## Dd586_2898 hypothetical protein 171 123 Op 4 . + CDS 181732 - 182142 345 ## SG0277 hypothetical protein + Term 182172 - 182209 10.1 172 124 Op 1 . + CDS 182220 - 182456 203 ## JW5023 hypothetical protein + Term 182499 - 182531 2.2 173 124 Op 2 . + CDS 182542 - 183000 281 ## EcSMS35_0307 antirestriction protein 174 124 Op 3 . + CDS 183012 - 183491 420 ## COG2003 DNA repair proteins 175 125 Op 1 . + CDS 183746 - 184063 244 ## JW2626 antitoxin of the YpjF-YfjZ toxin-antitoxin system 176 125 Op 2 . + CDS 184084 - 184407 234 ## JW2627 toxin of the YpjF-YfjZ toxin-antitoxin system + Term 184501 - 184536 0.2 177 126 Tu 1 . - CDS 185090 - 185794 463 ## - Prom 185926 - 185985 5.6 - Term 186136 - 186168 2.5 178 127 Tu 1 . - CDS 186202 - 186603 141 ## - Prom 186687 - 186746 3.6 - Term 187223 - 187254 -1.0 179 128 Op 1 . - CDS 187313 - 187840 93 ## 180 128 Op 2 10/0.093 - CDS 187827 - 188528 447 ## COG3121 P pilus assembly protein, chaperone PapD 181 128 Op 3 . - CDS 188521 - 190860 771 ## COG3188 P pilus assembly protein, porin PapC - Prom 190988 - 191047 4.9 182 129 Tu 1 . - CDS 191134 - 191649 411 ## ROD_p1171 putative fimbrial protein - Prom 191813 - 191872 5.7 - Term 192182 - 192229 -0.4 183 130 Op 1 . - CDS 192381 - 192722 244 ## 184 130 Op 2 . - CDS 192742 - 193548 100 ## - Prom 193782 - 193841 8.2 185 131 Tu 1 . + CDS 194467 - 194625 63 ## + Term 194875 - 194927 -0.4 186 132 Op 1 . - CDS 194696 - 196426 1711 ## COG2268 Uncharacterized protein conserved in bacteria 187 132 Op 2 . - CDS 196463 - 196933 133 ## ROD_35931 hypothetical protein - Prom 197130 - 197189 7.0 + Prom 197112 - 197171 2.9 188 133 Tu 1 . + CDS 197195 - 197374 116 ## + Term 197454 - 197490 1.8 - Term 197279 - 197325 -0.0 189 134 Op 1 9/0.093 - CDS 197449 - 198408 780 ## COG0583 Transcriptional regulator 190 134 Op 2 . - CDS 198377 - 199558 716 ## COG0477 Permeases of the major facilitator superfamily - Prom 199579 - 199638 2.0 191 135 Op 1 . - CDS 199745 - 201400 479 ## COG3307 Lipid A core - O-antigen ligase and related enzymes 192 135 Op 2 . - CDS 201403 - 202077 438 ## ROD_35031 putative transcriptional regulator 193 135 Op 3 4/0.326 - CDS 202091 - 202639 243 ## COG3539 P pilus assembly protein, pilin FimA 194 135 Op 4 4/0.326 - CDS 202658 - 203716 567 ## COG3539 P pilus assembly protein, pilin FimA 195 135 Op 5 7/0.140 - CDS 203716 - 204327 383 ## COG3539 P pilus assembly protein, pilin FimA 196 135 Op 6 10/0.093 - CDS 204349 - 205110 457 ## COG3121 P pilus assembly protein, chaperone PapD 197 135 Op 7 6/0.186 - CDS 205158 - 207632 1859 ## COG3188 P pilus assembly protein, porin PapC - Prom 207727 - 207786 1.9 198 136 Op 1 4/0.326 - CDS 207813 - 208355 415 ## COG3539 P pilus assembly protein, pilin FimA - Term 208386 - 208426 6.2 199 136 Op 2 . - CDS 208434 - 208976 470 ## COG3539 P pilus assembly protein, pilin FimA - Prom 209121 - 209180 10.4 + Prom 209500 - 209559 4.7 200 137 Tu 1 . + CDS 209740 - 209961 253 ## Spro_3367 putative outer membrane lipoprotein + Term 209984 - 210054 5.0 - Term 209984 - 210023 4.4 201 138 Op 1 . - CDS 210047 - 210238 209 ## LF82_2523 uncharacterized protein YaiA - Prom 210259 - 210318 2.2 202 138 Op 2 . - CDS 210334 - 211254 651 ## COG0583 Transcriptional regulator - Prom 211311 - 211370 4.9 + Prom 211270 - 211329 3.1 203 139 Op 1 . + CDS 211419 - 212681 1016 ## COG0019 Diaminopimelate decarboxylase + Prom 212789 - 212848 5.0 204 139 Op 2 . + CDS 212912 - 215038 1756 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains + Term 215049 - 215097 14.0 + Prom 215152 - 215211 4.1 205 140 Tu 1 . + CDS 215349 - 215813 444 ## ETAE_2909 hypothetical protein + Term 215820 - 215872 12.1 206 141 Op 1 4/0.326 - CDS 215869 - 216897 812 ## COG0309 Hydrogenase maturation factor 207 141 Op 2 13/0.023 - CDS 216912 - 218027 1001 ## COG0409 Hydrogenase maturation factor 208 141 Op 3 8/0.093 - CDS 218041 - 218337 385 ## COG0298 Hydrogenase maturation factor 209 141 Op 4 11/0.023 - CDS 218328 - 219443 692 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 210 141 Op 5 . - CDS 219461 - 219802 311 ## COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) - Prom 219846 - 219905 1.9 211 142 Tu 1 . - CDS 219912 - 222194 1387 ## COG0068 Hydrogenase maturation factor - Prom 222289 - 222348 2.4 212 143 Tu 1 1/0.791 - CDS 222420 - 224681 1979 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Term 224717 - 224778 2.5 213 144 Tu 1 . - CDS 224803 - 225348 397 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 - Prom 225480 - 225539 4.4 - Term 225711 - 225752 7.1 214 145 Op 1 . - CDS 225757 - 226020 287 ## COG4104 Uncharacterized conserved protein 215 145 Op 2 . - CDS 226032 - 226922 415 ## Pput_2114 hypothetical protein 216 145 Op 3 . - CDS 226942 - 227382 221 ## Pput_2114 hypothetical protein - Prom 227599 - 227658 7.1 217 146 Tu 1 . - CDS 227793 - 228155 117 ## Pput_2114 hypothetical protein - Prom 228390 - 228449 4.4 - Term 228468 - 228505 -0.9 218 147 Op 1 . - CDS 228662 - 231550 834 ## Pput_2115 hypothetical protein 219 147 Op 2 . - CDS 231537 - 232751 464 ## PputGB1_3235 hypothetical protein 220 147 Op 3 . - CDS 232755 - 234845 1087 ## COG3501 Uncharacterized protein conserved in bacteria 221 147 Op 4 . - CDS 234855 - 235343 156 ## COG3519 Uncharacterized protein conserved in bacteria - Term 236797 - 236842 12.0 222 148 Op 1 5/0.279 - CDS 236868 - 238544 1616 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 223 148 Op 2 . - CDS 238593 - 239012 394 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Term 239756 - 239807 6.3 224 149 Op 1 . - CDS 239933 - 240460 593 ## COG0680 Ni,Fe-hydrogenase maturation factor 225 149 Op 2 . - CDS 240453 - 240908 430 ## NT01EI_3276 hypothetical protein 226 149 Op 3 6/0.186 - CDS 240908 - 241732 781 ## COG3260 Ni,Fe-hydrogenase III small subunit 227 149 Op 4 5/0.279 - CDS 241729 - 242286 439 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 228 149 Op 5 7/0.140 - CDS 242303 - 244006 1856 ## COG3261 Ni,Fe-hydrogenase III large subunit 229 149 Op 6 10/0.093 - CDS 244080 - 245015 1026 ## COG0650 Formate hydrogenlyase subunit 4 230 149 Op 7 4/0.326 - CDS 245026 - 246933 1573 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 231 149 Op 8 . - CDS 246930 - 247463 266 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 - Prom 247616 - 247675 3.2 - Term 247782 - 247832 6.4 232 150 Op 1 . - CDS 247877 - 248734 281 ## 233 150 Op 2 2/0.628 - CDS 248818 - 249816 757 ## COG1609 Transcriptional regulators 234 150 Op 3 . - CDS 249856 - 250863 774 ## COG1609 Transcriptional regulators - Prom 251006 - 251065 3.5 + Prom 251401 - 251460 3.8 235 151 Op 1 5/0.279 + CDS 251611 - 253779 1704 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 236 151 Op 2 . + CDS 253776 - 254984 1143 ## COG0477 Permeases of the major facilitator superfamily + Term 254997 - 255034 6.1 237 152 Tu 1 . - CDS 255034 - 256074 994 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 256244 - 256303 3.5 + Prom 256311 - 256370 4.9 238 153 Tu 1 . + CDS 256501 - 257922 1227 ## COG1785 Alkaline phosphatase + Term 257927 - 257967 0.1 + Prom 257996 - 258055 6.4 239 154 Tu 1 . + CDS 258132 - 258962 483 ## ETAE_2886 hypothetical protein + Term 258973 - 259015 3.2 - Term 258968 - 258997 1.4 240 155 Tu 1 . - CDS 259026 - 259742 780 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance - Prom 259770 - 259829 5.2 241 156 Tu 1 . - CDS 259844 - 260530 616 ## COG3066 DNA mismatch repair protein - Prom 260628 - 260687 6.0 242 157 Op 1 7/0.140 + CDS 261243 - 261776 359 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 243 157 Op 2 . + CDS 261789 - 264035 1930 ## COG3605 Signal transduction protein containing GAF and PtsI domains + Prom 264039 - 264098 6.7 244 158 Tu 1 . + CDS 264212 - 264556 264 ## COG2919 Septum formation initiator 245 159 Op 1 19/0.000 + CDS 264686 - 265393 295 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 246 159 Op 2 8/0.093 + CDS 265467 - 265940 572 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 247 159 Op 3 8/0.093 + CDS 265944 - 266990 918 ## COG0585 Uncharacterized conserved protein 248 159 Op 4 13/0.023 + CDS 266971 - 267732 552 ## COG0496 Predicted acid phosphatase 249 159 Op 5 11/0.023 + CDS 267726 - 268358 549 ## COG2518 Protein-L-isoaspartate carboxylmethyltransferase 250 160 Op 1 8/0.093 + CDS 268843 - 269832 452 ## COG0739 Membrane proteins related to metalloendopeptidases 251 160 Op 2 . + CDS 269885 - 270871 1070 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 270930 - 270964 4.0 - Term 270905 - 270965 11.2 252 161 Tu 1 . - CDS 270976 - 273498 2447 ## COG0249 Mismatch repair ATPase (MutS family) - Prom 273645 - 273704 3.8 + Prom 273767 - 273826 4.4 253 162 Tu 1 . + CDS 273856 - 274953 943 ## COG2951 Membrane-bound lytic murein transglycosylase B + Term 274961 - 274998 7.1 + Prom 275063 - 275122 6.0 254 163 Tu 1 . + CDS 275231 - 275992 250 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 276125 - 276184 5.6 255 164 Op 1 27/0.000 + CDS 276283 - 277470 1009 ## COG0845 Membrane-fusion protein 256 164 Op 2 . + CDS 277537 - 280641 2735 ## COG0841 Cation/multidrug efflux pump + Term 280680 - 280721 7.1 + Prom 280658 - 280717 2.2 257 165 Op 1 12/0.023 + CDS 280837 - 281325 301 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 258 165 Op 2 14/0.023 + CDS 281398 - 282450 1110 ## COG0468 RecA/RadA recombinase 259 165 Op 3 5/0.279 + CDS 282517 - 282957 258 ## COG2137 Uncharacterized protein conserved in bacteria + Term 282967 - 283006 3.2 + Prom 282963 - 283022 1.7 260 166 Tu 1 . + CDS 283092 - 285719 2630 ## COG0013 Alanyl-tRNA synthetase + Term 285733 - 285790 11.6 + Prom 285751 - 285810 7.3 261 167 Tu 1 . + CDS 285973 - 286158 203 ## PROTEIN SUPPORTED gi|167855109|ref|ZP_02477881.1| 30S ribosomal protein S1 + Term 286161 - 286218 3.4 + TRNA 286519 - 286611 72.5 # Ser GCT 0 0 + TRNA 286616 - 286692 85.1 # Arg ACG 0 0 + TRNA 286747 - 286823 85.1 # Arg ACG 0 0 + TRNA 286878 - 286954 85.1 # Arg ACG 0 0 + TRNA 287146 - 287222 85.1 # Arg ACG 0 0 + Prom 287488 - 287547 3.3 262 168 Op 1 6/0.186 + CDS 287654 - 288220 477 ## COG0637 Predicted phosphatase/phosphohexomutase 263 168 Op 2 5/0.279 + CDS 288247 - 288648 336 ## COG1238 Predicted membrane protein 264 168 Op 3 6/0.186 + CDS 288719 - 290290 1419 ## COG2918 Gamma-glutamylcysteine synthetase + Term 290365 - 290409 0.9 + Prom 290366 - 290425 5.2 265 169 Tu 1 . + CDS 290447 - 290962 578 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis + Term 290984 - 291034 4.4 - Term 290983 - 291009 -0.7 266 170 Op 1 4/0.326 - CDS 291029 - 292330 1106 ## COG4536 Putative Mg2+ and Co2+ transporter CorB 267 170 Op 2 . - CDS 292400 - 293191 682 ## COG4137 ABC-type uncharacterized transport system, permease component - Prom 293221 - 293280 4.3 + Prom 293253 - 293312 2.6 268 171 Op 1 23/0.000 + CDS 293359 - 294720 1373 ## COG0541 Signal recognition particle GTPase + Term 294748 - 294790 8.2 + Prom 294750 - 294809 5.6 269 171 Op 2 12/0.023 + CDS 294891 - 295139 395 ## PROTEIN SUPPORTED gi|238791383|ref|ZP_04635022.1| 30S ribosomal protein S16 270 171 Op 3 30/0.000 + CDS 295158 - 295691 200 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 + Prom 295722 - 295781 3.0 271 171 Op 4 33/0.000 + CDS 295935 - 296525 466 ## COG0336 tRNA-(guanine-N1)-methyltransferase 272 171 Op 5 . + CDS 296589 - 296945 566 ## PROTEIN SUPPORTED gi|22124807|ref|NP_668230.1| 50S ribosomal protein L19 + Term 296974 - 297008 5.2 - Term 297016 - 297058 3.9 273 172 Tu 1 . - CDS 297078 - 297815 183 ## PROTEIN SUPPORTED gi|163803113|ref|ZP_02196997.1| 50S ribosomal protein L9 - Prom 297881 - 297940 6.6 - Term 297982 - 298022 9.1 274 173 Tu 1 . - CDS 298037 - 299380 1082 ## COG2704 Anaerobic C4-dicarboxylate transporter - Prom 299458 - 299517 5.9 275 174 Op 1 . - CDS 299561 - 299911 226 ## Dd586_3171 hypothetical protein 276 174 Op 2 . - CDS 299973 - 300722 519 ## COG3279 Response regulator of the LytR/AlgR family - Prom 300783 - 300842 6.2 + Prom 300771 - 300830 5.2 277 175 Op 1 7/0.140 + CDS 300937 - 302019 758 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 278 175 Op 2 . + CDS 302025 - 303146 1019 ## COG0287 Prephenate dehydrogenase + Term 303164 - 303205 5.0 - Term 303159 - 303186 1.5 279 176 Tu 1 . - CDS 303212 - 304363 809 ## COG0077 Prephenate dehydratase - Prom 304566 - 304625 6.2 - Term 304598 - 304625 1.5 280 177 Tu 1 . - CDS 304655 - 305008 462 ## PROTEIN SUPPORTED gi|146312717|ref|YP_001177791.1| translation inhibitor protein RaiA - Prom 305034 - 305093 5.0 - Term 305273 - 305313 4.3 281 178 Tu 1 . - CDS 305334 - 306071 811 ## COG4105 DNA uptake lipoprotein + Prom 306092 - 306151 2.7 282 179 Op 1 11/0.023 + CDS 306203 - 307183 1024 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 283 179 Op 2 7/0.140 + CDS 307180 - 307914 468 ## COG1496 Uncharacterized conserved protein + Prom 307959 - 308018 4.7 284 180 Tu 1 . + CDS 308091 - 310664 1883 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 310695 - 310733 6.9 Predicted protein(s) >gi|316918029|gb|ADCU01000020.1| GENE 1 2 - 2147 493 715 aa, chain - ## HITS:1 COG:no KEGG:Oant_4504 NR:ns ## KEGG: Oant_4504 # Name: not_defined # Def: outer membrane autotransporter # Organism: O.anthropi # Pathway: not_defined # 31 659 6 631 1012 463 50.0 1e-129 MNKIYKLVWNVAHGEWVVCSELGRKTKLGSLRSSLIIGALLLSQNAISAECSTNANGTIT VNNSINTAGCSVESIGSEIGNTSIWNTGILQYSQGVNRNITILNDLSFTIKGSAGIAVGG TSPAYVSTFDASNKTIDLTIANLDTNAAKPEGDNIAKVGVGSSHGATVKIGTMNLTMLSL PNGTSYSERFEHYGVVAGSSVNAGEQENFNGMYSRALFDNLDINMASTNNTGFLASSYPL VVGIRAIQGASRNSGNGAAGYVSVSDTLNLNIKNGKNDAIGIYISGSEINNVTPQVHLHD SNIKIVSSSSRANAIRLGKSAAIGTGEGQLYSSGKMFLDTTEAPNDASIDIIWQGALLDA NENTSRTEIKSGKEAITISGNASQATAKTITNFNNLIVNKTGNNGSDLINVAGGQNLYQL SVRGEDSNLISNNGKDAYILDVAGSASSASNVLFNFSQGRMQGLINTSNASKLDVNIADD ATWQLEKNASSTTASFTTLNLNNSSLIAHDVNNGNSTGNNSISSFTLKGNVLAKNSEIDM ANGVAGDHLTIDGNFTTGGNTWLMDSYLTGEGVSTNNGGDGKSYTDTVTITGDTIDRGYD YVWINNLNMNKPTGQESLELIKVNGQSDGEFLLQRRVVKGNYEYLLNKHSDDGAWYLESF AMKGETGATGETGATGETGATGETGATGETGATGETGATGETGATGETGATGETG >gi|316918029|gb|ADCU01000020.1| GENE 2 2461 - 2673 131 70 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_2881 NR:ns ## KEGG: NT01EI_2881 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 70 1 70 391 102 70.0 4e-21 MSARSLCRNFFKNILEPLHLYRQKALIEATSAVINGASLTLTSIGRHLTGTASVKNKIKR VDRLLGNTHL >gi|316918029|gb|ADCU01000020.1| GENE 3 2725 - 3372 143 215 aa, chain + ## HITS:1 COG:no KEGG:Dd1591_1976 NR:ns ## KEGG: Dd1591_1976 # Name: not_defined # Def: transposase IS4 family protein # Organism: D.zeae # Pathway: not_defined # 1 208 89 297 397 211 48.0 2e-53 MSRAVILIDWSAYHASRFQLLQASLACDGRSLPLMSYVVPSSQTANPEVHEYFLESLAEC FTPETHVIVITDAGFQGWWFQQVSSRGWTYICRVLGNHYYNVGDGWEKVINSGIKTSTTA TYLGEGLLGRSKKAQHEGHFYLYKSKPKGRKFKRSKERAPRPSVTTKAHTVGKSPWFIFT NSTEFSPKQVMKLYSRRMQIEQNFQDEKILTEDSG >gi|316918029|gb|ADCU01000020.1| GENE 4 3892 - 4764 468 290 aa, chain + ## HITS:1 COG:ykfA KEGG:ns NR:ns ## COG: ykfA COG3596 # Protein_GI_number: 16128238 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli K12 # 9 290 10 288 288 311 54.0 8e-85 MHELPIPAAIERALSGLPPAIRNRILERLQSLTDYEPVIGIAGKSGAGKSSLCNALFSGE VSPVSDVLACTRDALRFRLKADKHSLMIIDLPGAGESEVRDRQYAELYQSLLPEMDLVLW VIKADDRALSVDEKFYREVIGPYRDKVLFVVSQVDRFEPLPQGASAFDSPSVPQRHNLSL KLEDIRQRFAPIHPLCAVSARTRWGIAAMVSVMMACLPDKATSPVTSRLHKSLRTENIRG QARERFGRTVGDMLDTVARSSAVSAPTRNVIQAIRDIVVRVARSLWDFFF >gi|316918029|gb|ADCU01000020.1| GENE 5 4849 - 5670 596 273 aa, chain + ## HITS:1 COG:no KEGG:JW2614 NR:ns ## KEGG: JW2614 # Name: yfjQ # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 272 1 272 273 504 91.0 1e-141 MTRLASRFGAANLIRRDRPLTHEELFRVVPSVFCEDKHQSRSERYTYIPTISLLDSLQKE GFQPFFACQTRVRDPGRREHTKHMLRLRRAGQITGKQVPEIILLNSHDGSSSYQMLPGLF RAVCQNGLVCGETFGEVRVPHKGDVVSQVIEGAYEVLGIFDRVEEKRDAMQSLMLPPPAQ QALAQAALTYRFGEDHQPVTASQVLAPRRWQDESNDLWTTYQRIQENLIKGGLSGRNITG KRTHTRAVRGIDGDVKLNRALWVIAETLMEQIA >gi|316918029|gb|ADCU01000020.1| GENE 6 5907 - 6620 269 237 aa, chain + ## HITS:1 COG:yfjR KEGG:ns NR:ns ## COG: yfjR COG2378 # Protein_GI_number: 16130552 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli K12 # 1 230 1 230 233 257 61.0 1e-68 MTQAERRHDRLAVRLSLIICRLVTGETLSVTKLAAEFGVSVRTLRRDFHERLMYLDLEYH QGHCRLRSGNSGAQGEFDVLTFAHRTGLADAFPGFDRRLAGALLNADDMPCLVWQPANAI PPSGSLTFYRLVSAISTRQRVILLAEGMRCEGLAPYRLISLYGHWYLVGELQGRIAVYPL ENIHTVTVLRATFIPHKDFSLLSTRPDFIQALPHFDSVRDALSLTCHADTSSHHCAE >gi|316918029|gb|ADCU01000020.1| GENE 7 6783 - 7244 332 153 aa, chain + ## HITS:1 COG:no KEGG:ECO111_0314 NR:ns ## KEGG: ECO111_0314 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 17 151 172 306 312 163 52.0 2e-39 MKKMIAVLALSSGLGFSLPSLARSDIPPDTIWSFKDPKGRVLWDVCGGKNSTCSIVLAAT NRVAIVNRKSTNGCALGDFYVVAKPEKGWNQYDTGTCSSNAYFSKGTMNNGQYRTIDVRL NGELVKRFPIEYWSLSKSFSNGNRPKWTKDKTN >gi|316918029|gb|ADCU01000020.1| GENE 8 7379 - 7555 138 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKLLVHMLGIALAGAAQSIMLVASITGISLIGISILVSQKLSISKLRQLAPRYLRYE >gi|316918029|gb|ADCU01000020.1| GENE 9 7554 - 7940 245 128 aa, chain + ## HITS:1 COG:no KEGG:ECO103_5083 NR:ns ## KEGG: ECO103_5083 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 126 32 157 157 157 57.0 1e-37 MGVTEYIITSPEKTVLNVSCTTNPDEEDNLQHSVYITLPGGKGANSHEEDKTITLVTGDS QYPVPSSLGWRGADNAWFSFIEALSQASKFDIYINDDKVGSFSPSAENIRKELDGINECK DIRYQEAQ >gi|316918029|gb|ADCU01000020.1| GENE 10 8172 - 8651 296 159 aa, chain + ## HITS:1 COG:yfjY KEGG:ns NR:ns ## COG: yfjY COG2003 # Protein_GI_number: 16130559 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli K12 # 1 159 2 160 160 229 73.0 2e-60 MENTVDFSSPSLPLHVQRTVDKAFELLSHYLHQPGVAFTSTSAVRDWLCLRMAGCEREEF MVLYLNHQNQLLAWETLFTGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDIAPSQS DKVITQRLIQALGLVDVRVLDHFIVGGRHIASFAENGLL >gi|316918029|gb|ADCU01000020.1| GENE 11 8740 - 9060 222 106 aa, chain + ## HITS:1 COG:no KEGG:JW0234 NR:ns ## KEGG: JW0234 # Name: ykfI # Def: toxin of the YkfI-YafW toxin-antitoxin system # Organism: E.coli_J # Pathway: not_defined # 1 104 1 104 113 163 73.0 1e-39 MKTHPAINPRVAKPCPPPVAVWQMLLTRLLDQHYGLRLDDTPFINESVIQEHIDAGITLM DAINFLVERYELIRTDRKGFTWQDQTPFLTAIDILRARRATSLINT >gi|316918029|gb|ADCU01000020.1| GENE 12 9174 - 10007 386 277 aa, chain + ## HITS:1 COG:no KEGG:XBJ1_1836 NR:ns ## KEGG: XBJ1_1836 # Name: not_defined # Def: hypothetical protein # Organism: X.bovienii # Pathway: not_defined # 1 276 1 276 277 516 90.0 1e-145 MQTEPDVLTDHSELILSTNIERTVSGRDAALVQIEQLIQQLDAVSRLTSEVGGGTAQDWA MKSGHRYDSWLTEPSEKAMPAITRNIDRSIWRDLMLKSGMMALMDAQARDQLHKTLEEGD LPAISEANILSTFKQLHLNKRDVFERGIINVFKGLSWDYKTNSPCSFGKKIIINNLVTHN RWGFSLNWGWRRDQLADLERMLFLLDGKPIPDNRGDITTRLMDHIRDNPSKDVYEDNLFS IRYFQKGTGHITFKRCDLTEKMNDIVATHYPEMLAAG >gi|316918029|gb|ADCU01000020.1| GENE 13 10325 - 10819 403 164 aa, chain + ## HITS:1 COG:ygjF KEGG:ns NR:ns ## COG: ygjF COG3663 # Protein_GI_number: 16130964 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Escherichia coli K12 # 1 163 1 163 168 228 66.0 4e-60 MIQDIIAPDLRVVFCGINPGLSSAHQGFHFANPTNRFWKVIHLAGFTQRQLAPQDEKHLL DTGCGITALVSRPTVTAAEVTREELRAGGEALEEKILSYQPQSIAILGKQAYTQAFGIRK VDWGRQDKTIGNTQIWVLPNPSGLSRITVDELVASYRVLNEALG >gi|316918029|gb|ADCU01000020.1| GENE 14 10887 - 12719 2092 610 aa, chain - ## HITS:1 COG:STM3211 KEGG:ns NR:ns ## COG: STM3211 COG0568 # Protein_GI_number: 16766511 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Salmonella typhimurium LT2 # 1 610 46 660 660 962 90.0 0 MEQNPQSQLKLLVTKGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP DADDLMLAENIADEDAAEAAVQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA KRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDIITGFVDPNAEEDLAPTATN VGSELSSEDLNDDDEEEDEDDDSEDDNSIDPELARQKFSELREQYEKTRVAIKTHGRSHA KAAEEILNLSEVFKQFRLVPKQFDYLVNNMRQMMDRVRTQERLIMKLCVEQSKMPKKNFI TLFTGNETNTTWFDAALAMAKPWGEKLKDVREDVERSLQKLHQIEEETGLTIEQVKDINR RMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRR GYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEEL AERMMMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLRSA TRDVLSGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSR SEVLRSFLDD >gi|316918029|gb|ADCU01000020.1| GENE 15 12988 - 14736 1396 582 aa, chain - ## HITS:1 COG:YPO0644 KEGG:ns NR:ns ## COG: YPO0644 COG0358 # Protein_GI_number: 16120969 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Yersinia pestis # 1 581 1 581 582 989 81.0 0 MAGRIPRVFINDLLARTDIVDLVDARVKLKKQGKNYHACCPFHNEKTPSFTVNADKQFYH CFGCGAHGNAIDFLMNYDRLEFVESVEELATMAGLEIPYEAGTGPSQIERHQRQNLYQLM DGLSDFYQQALRQPSSQSAQQYLMQRGLSQEIIDHFAIGYAPAGWDNALKRFGRDPASRT ALNDAGMLVNNENGRTYDRFRDRVMFPIRDRRGRVIAFGGRILGDGTPKYLNSPETDIFH KGRQLFGLYEAQQRHPELARLLVVEGYMDVVALAQFGIDYAVASLGTSTTSEHIQLMFRT TDTVVCCYDGDNAGREAAWRALETALPFLSDGRQLKFMFLPDGEDPDTLVRKEGTAAFEQ RIEQAQPLSAFLFDTLMPQVDLSTPDGRTKLSALALPLIGQIPGETLRLYLRQFLGQKLG ILDDSQLEKLLPRQAETGNSYQQPQLKRTTMRILIGLLVQNPSLAAEVPTLEGLREHPLP GLPLFIELVETCLAQPGLTTGQLIELYRDNKYAQQLETLATWNHMVVEDMVHQTFVDTLG SLYDSMLEQRQEELIALDRTQGLNADQRRELWALNQALAKKT >gi|316918029|gb|ADCU01000020.1| GENE 16 14952 - 15167 357 71 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803607|ref|NP_289640.1| 30S ribosomal protein S21 [Escherichia coli O157:H7 EDL933] # 1 71 1 71 71 142 100 2e-32 MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKL ARENARRTRLY >gi|316918029|gb|ADCU01000020.1| GENE 17 15406 - 16461 674 351 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229879751|ref|ZP_04499249.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Slackia heliotrinireducens DSM 20476] # 10 347 433 779 781 264 45 3e-69 MRHLSCWRKVVGAAMRILGIETSCDETGIAIYDDEQGILANQLYSQIKLHADYGGVVPEL ASRDHVRKTIPLIQAALKEANLTAKDLDGVAYTAGPGLVGALLVGATVGRALAFAWDLPA VPVHHMEGHLLAPMLEDNPPAFPFVALLVSGGHTQLISVTGMGQYELLGESIDDAAGEAF DKTAKLLGLDYPGGPMLSKMAQQGEAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRNNE ADEQTRADIARAFEDAVVDTLAIKCKRALEQTGFKRLVMAGGVSANRTLRARLAEMMKKR GGEVFYARPEFCTDNGAMIAYAGMVRLKSGVNADLSVSVRPRWPLAELPAV >gi|316918029|gb|ADCU01000020.1| GENE 18 16508 - 17167 386 219 aa, chain - ## HITS:1 COG:YPO0647 KEGG:ns NR:ns ## COG: YPO0647 COG0344 # Protein_GI_number: 16120972 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 202 1 202 216 349 86.0 2e-96 MSATALGMIILAYLCGSISSAIVVCRVAGLPDPRENGSGNPGATNVLRIGGKTAAAAVLI FDVLKGMLPVWLAYKFDVAPLYLGLTAIAACLGHIYPVFFHFRGGKGVATAFGAIAPIGW DLTGLMTVTWLLTVLLSGYSSLGAIVSALVAPFYVWWFTPQFTFPVAMLSCLILMRHHDN IQRLWRGQESKIWKKLKKPTKEADPTSEDSASEKKHTDQ >gi|316918029|gb|ADCU01000020.1| GENE 19 17321 - 17677 412 118 aa, chain + ## HITS:1 COG:YPO0648 KEGG:ns NR:ns ## COG: YPO0648 COG1539 # Protein_GI_number: 16120973 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Yersinia pestis # 1 118 1 118 119 185 82.0 2e-47 MDIVFIEELTVITTIGVYDWEQTIRQKLVFDIELAWDNRKAALSDDVSDCLSYADVSEAV IKHVEPNQFALVERVAEEVAVMLMDRFNSPWVRIKVSKPGAVAHAKSVGVQIERGKRI >gi|316918029|gb|ADCU01000020.1| GENE 20 17864 - 18634 717 256 aa, chain + ## HITS:1 COG:YPO0649 KEGG:ns NR:ns ## COG: YPO0649 COG1968 # Protein_GI_number: 16120974 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Yersinia pestis # 2 256 19 272 272 375 84.0 1e-104 MLPSFLPVSSTGHMIIVGHWLGFEGDKAKTFEVIIQLGSILAVVVMFWRRLFGLIGIHFG QPPLHEGKTQGHLTLGHIILAMIPAVVMGLVFHDAIKTLFAPRTVVYALVVGGFLLLAAE WLKPKQPRAVGLDDITYRQAFMIGCFQCLALWPGFSRSGATISGGMLMGVSRFAASEFSF ILAVPMMMGATALELYKSLPFLSVADLPMFAVGFVTAFIVALIAIKTFLSVIKRISFVPF AIYRFIVAAVVYMVFL >gi|316918029|gb|ADCU01000020.1| GENE 21 18698 - 19975 1118 425 aa, chain - ## HITS:1 COG:YPO0650 KEGG:ns NR:ns ## COG: YPO0650 COG0617 # Protein_GI_number: 16120975 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Yersinia pestis # 10 414 1 405 412 627 76.0 1e-179 MWGISEEVSLKIFLVGGAVRDKRLNLPVYDRDWVIEGATPEELIAQGFEQVGKDFPVFLH PKSHEEYALARTERKSGRGYTGFVTYFAPDVTLEQDLLRRDLTINAMAESADGTLIDPYG GLDDLNNKVLRHVSDAFHEDPLRVLRVARFAARFAHLGFHVAAETMALMTQMTTDNELQN LTPERVWRETEKALMTQSPQIYFQVLRDCGALAILFPEIDNLFGVPAPEKWHPEIDTGIH TLMALAMAAKLTEEIDVRFATLTHDLGKGLTPPELWPHHHGHGPAGVKLVEALCQRMRVP NAVRELAKIVAEYHDLIHTVEKLRPVTLLKLFDSIDVWRKPHRLDQMIMTSEADARGRTG FENNPYPQGDYLRAAYKVAEGVSVRDVVDAGFKGQQIREELQQRRLHALKTWKQEASSQE DTNSR >gi|316918029|gb|ADCU01000020.1| GENE 22 20120 - 20737 537 205 aa, chain - ## HITS:1 COG:ECs3938 KEGG:ns NR:ns ## COG: ECs3938 COG3103 # Protein_GI_number: 15833192 # Func_class: T Signal transduction mechanisms # Function: SH3 domain protein # Organism: Escherichia coli O157:H7 # 1 205 1 206 206 252 69.0 3e-67 MHKFRLVCLTLLAACFTLNAHAEEKRYISDELNTYVHSGPGNQYRIVGTLNAGEEVELLS VNADNKYGQVRDAKGRTVWLPMEQLSTEPSLRSRVPELEQQVKTLTDKLTNIDNSWNQRT AEMQQKVANSDNTINGLKSENQNLKEQLASAQKKMSVIDTQLDDKKRAIFMEWFLYGGGV AGGGLLLGLLLPRLIPRRKKDRWMN >gi|316918029|gb|ADCU01000020.1| GENE 23 20958 - 22223 1179 421 aa, chain - ## HITS:1 COG:VC2442 KEGG:ns NR:ns ## COG: VC2442 COG0306 # Protein_GI_number: 15642438 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Vibrio cholerae # 1 420 14 431 433 528 73.0 1e-149 MAIIADHGTLLILIAAFFGLLMAIGIGANDVANAMGTSVGARAITVRQAIIIAMIFEFAG AYLAGGEVTQTIRNGIIDTSAFSAQPDVLIFGMMSSLLAAGIWLILASMMGWPVSTTHSI IGAIIGFACVSVGPDAVEWGGVKGIVGSWIITPLISGVVAYGIFLSAQRLIFNTDKPFAN ARRYGPIYMFLTSLVILLVTIKKGLKHVGLHLTNGETWLISIALSVLVMVGGYFYLARKS FVDNADEEDHFRGVEKVFSLLMVITACAMAFAHGSNDVANAIGPLSAIVAIVHDPIALAS TSPIVWWILPLGGIGIVIGLALMGRRVMETVGSGITDLTPSRGFAAQFATASTVVIASGT GLPISTTQTLVGAVLGVGFARGIAALNLNVVRNIVASWIITLPAGAGLSIVLFYILQALF G >gi|316918029|gb|ADCU01000020.1| GENE 24 22276 - 22956 719 226 aa, chain - ## HITS:1 COG:VC2441 KEGG:ns NR:ns ## COG: VC2441 COG1392 # Protein_GI_number: 15642437 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate transport regulator (distant homolog of PhoU) # Organism: Vibrio cholerae # 1 225 3 227 228 290 64.0 2e-78 MPVNTILGLFAKSPLKPLQEHASRVHECCSLLVPFFQATAQQQWDEAQHIRELISTLEKQ ADVLKREIRLKLPRGLFLPVDRSDMLDLVTQQDRLANRAKDIAGRVIGRNLQVPQQMQAD FMVYLQRCLDATTQANKVIHELDELLETGFRGREASLVEQMVMELDHIEDDTDHQQILLR QALLVLEPQHNPIDVMCLYQVMEWIGSLADESLRVGSRLEMMLARG >gi|316918029|gb|ADCU01000020.1| GENE 25 23104 - 24420 1092 438 aa, chain + ## HITS:1 COG:YPO0652 KEGG:ns NR:ns ## COG: YPO0652 COG3025 # Protein_GI_number: 16120977 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 5 436 1 432 435 442 53.0 1e-124 MTEAMTVEIELKFIATPEVAEQLSARLAPWPNVHTAAQKLTNIYYETSENTLRGYDMGLR VRGYGDRYEMTLKTAGKTIGGLHQRPEFNVELKGADLDIRLLPPEVWPKGCDVDALQAAL SPVFSTHFAREKWVVTYRSSEIEVALDQGEVKAGELSEPLYEIELELKSGSREDLLAFAQ EITAEGGLRLGSLSKAARGYHLAKGNPQREIVPLGILKVAPKASVEQGMTDAFTFALRHW QANEEVWLQGDRKAQKTVLEAVELLRQIFVLFGGLVPRKASTELRAGLTALEEQLATPRL DAQKVCFSPLYLNTQLALTCWIATAGWRSFVNEKTQTKLNASFKRFADIMLGRAGAELKE AFDHVHHGGEYQDKYTRLVRQLLSFHVLSGAYPDEDVTQYLSGWQTLQQAIIQKQEAYIE STRKHAMDQPVFWLNGTH >gi|316918029|gb|ADCU01000020.1| GENE 26 24545 - 27388 2092 947 aa, chain + ## HITS:1 COG:YPO0653 KEGG:ns NR:ns ## COG: YPO0653 COG1391 # Protein_GI_number: 16120978 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Yersinia pestis # 8 944 3 944 951 1328 74.0 0 MSAFASRPLPSLLQAQATQISERLAVSSPEELCALALSDFMSENFITHPEWWQQLHDTPP TSNEWQNYANWLDEQLVNALDEASLMRGLRLFRRHMLARISWMQSLNLCETSDTLRQLSE LAETLIITARDRLYQTCCAEWGTPCNSQGEPQPLLILGMGKLGGGELNFSSDIDLIFAYP ESGVTQGGRRELDNAQFFTRLGQRLIKALDQPTVDGFVYRVDMRLRPFGDSGPLVLSFAA LEDYYQEQGRDWERYAMVKARLMGGSEDAYSQELRRTLRPFVFRRYIDFSVIQSLRNMKS MIAREVRRRGLKDNIKLGAGGIREIEFITQVFQLIRGGREPSLQQRALQPSLRAIGQLGL LQPEQVESLLSSYLFLRRLENLLQAINDEQTQTLPTDELNRARLAWGMGFGDWPELMAQR DQHMRSVRLIFNELIGDDEGNEGGETAPSEQFAALWQDSLDESELDPFTPQLEGESRQLL LRCINDFRNDVDKRTIGPRGREVLGQLMPELLGEVCAREDAVRVLQRLTPLLLNIVTRTT YLELLVEYRAALSQLIRLCAASPMVATQLARYPLLLDELLDPNTLYQPVPQDAYQDELRQ YLMRVPADDEEQNLEALRQFKHAHQLRIAASDISGALPVMKVSDHLTYLAEAMIDAVVQQ AWTHMVARYGQPTHLQGREGRGFAVLGYGKLGGWELGYSSDLDLVFLLDCPSDVMTSGER SIDGRQFYLRLAQRIMHLFSTRTSSGILYEVDARLRPSGASGMLVSTVESFAEYQRNEAW TWEHQALVRARPVYGDTQIHQQFDAIRHEILCRPRVGDTLKIEVREMREKMRQHLGGKHR EMFDIKADEGGITDIEFIAQYLVLNYAAQEPRLTRWSDNVRIFELMANYNIMPDDEAAAL TKAYVTMRDAIHHLALQEQSGTVGLDMFVAEREQVRQSWAKWLGEKI >gi|316918029|gb|ADCU01000020.1| GENE 27 27474 - 27719 208 81 aa, chain + ## HITS:1 COG:no KEGG:CJA_3183 NR:ns ## KEGG: CJA_3183 # Name: ccdA # Def: CcdB antidote CcdA # Organism: C.japonicus # Pathway: not_defined # 11 81 63 133 133 71 50.0 9e-12 MKRKTLLTGSKKAVNVSIDQGLIQQAKALNINLSAVMEDALQRAVIAKGQQQWLANNRQS IAAYNQDVEEHGVFSDGLRSF >gi|316918029|gb|ADCU01000020.1| GENE 28 27824 - 28039 141 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVIPLGLRNPSSPLAEQERLILSFKIEGQEVLLMTPQMSGVALSQLGEQVDDLNYCRDDI VGAMDFLVFGY >gi|316918029|gb|ADCU01000020.1| GENE 29 28097 - 29026 803 309 aa, chain - ## HITS:1 COG:STM1155 KEGG:ns NR:ns ## COG: STM1155 COG1560 # Protein_GI_number: 16764511 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Salmonella typhimurium LT2 # 8 309 5 306 306 429 67.0 1e-120 MADNHVYPKFERELLHPRYWLTWLGLGVLYILVLLPYPWLFKLGTWLGRTAMKFMKRRVK ISLRNLELCFPEMSESERKERVAKNFESVGMGLIETGMAWFWPTWRINRWCKAEGLENIT KAQQEGKGVLLIGLHFLTLELGARIFGVHNPGVGVYRPNDNKVVDWMQTWGRLRSNKYML DRKDVKGMIRALKEGEIVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTYILARMGKPAII PFNAIRAEDGSGYTMIIQPRLEDFPLENETVAAAAMNKVVEQEILRAPNQYMWMHRRFKT RPKGMPSRY >gi|316918029|gb|ADCU01000020.1| GENE 30 29134 - 30564 1286 476 aa, chain + ## HITS:1 COG:rfaE KEGG:ns NR:ns ## COG: rfaE COG2870 # Protein_GI_number: 16130948 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Escherichia coli K12 # 1 473 1 473 477 790 84.0 0 MKVTLPDFRHANVLVVGDVMLDRYWYGPTSRISPEAPVPVVKVDTVEERPGGAANVAMNI ASLGANARLVGLTGIDDAARALSAKLGEVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLD FEEGFSSIDPQPIFDRIQHVLPKLGALILSDYAKGALNSVQQMIQLARAANVPVLIDPKG TDFERYRGATLLTPNLSEFEAVVGRCKTDEELVERGLQLMREFELTALLVTRSEQGMTLL QHDQPPLHMPTQAQEVYDVTGAGDTVIGVLATCIAAGTSLEEACFLANAGAGVVVGKLGT STVSPIELENAIRGRSETGFGVMSQDELKVAVANARQRGEKVVMTNGVFDILHAGHVSYL ANARKLGDRLIVAVNSDASTKRLKGEERPVNALAQRMIVLAALEAVDWVISFEEDTPQRI ISEILPDLLVKGGDYKPEDIAGGKEVIAAGGEVRVLNFEDGCSTTNIIKTIRQGHE >gi|316918029|gb|ADCU01000020.1| GENE 31 30595 - 31839 1044 414 aa, chain + ## HITS:1 COG:ECs5122 KEGG:ns NR:ns ## COG: ECs5122 COG0531 # Protein_GI_number: 15834376 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 409 1 409 418 536 77.0 1e-152 MSGLKQELGLAQGVGLLSTSLLGTGVFAVPALAALVAGDDSLWAWPILIVLVFPIAIGFA ALGRHFPSAGGAAHFVGMAFGPHMARVTGWLFLSVIPVGLPAALQIAAGFWQAMFGWHGW QLLLVEVGTLGAVWFLGTRGAGSSANLQTLIAALVVALVAAIWWRGGISPAEIPFPQPSD VSPSNLFSALAVMFWCFVGLEAFAHLASEFKHPERDFPRALIIGLLLAGIVYWGCTVAVL HFNAFGAEKAAAASLPGIVVQLFGQKALWVACIIGYLACFASLNIYTQSFARLVWSQAQL KQNSRLAKLSARQAPVNALNVVLGCCLICAVGIFTLGIALDELIIYANGIFIMIYLLCML AGCRLLKGRSRLMAAIGGVLCLLLLYMVGWKSAYAMVMLAALWAFLPKRAVAGA >gi|316918029|gb|ADCU01000020.1| GENE 32 31929 - 32204 433 91 aa, chain - ## HITS:1 COG:YPO0656 KEGG:ns NR:ns ## COG: YPO0656 COG2960 # Protein_GI_number: 16120981 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 80 1 80 93 106 83.0 1e-23 MIDPKKIEQIARQVHESMPKGLREFGDDVEKKIRQILQAQFNRMDLVNREEFDVQTQVLM RTREKLALMEQRLSALEEKLAATETTTKDAE >gi|316918029|gb|ADCU01000020.1| GENE 33 32710 - 33363 859 217 aa, chain + ## HITS:1 COG:ECs3929 KEGG:ns NR:ns ## COG: ECs3929 COG0108 # Protein_GI_number: 15833183 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 217 1 217 217 355 86.0 3e-98 MNQTLLSDFGTPMERVERALTALREGRGVMVLDDENRENEGDMIFPAETMTEEQMAMTIR HGSGIVCLCITEERRLQLDLPMMVSNNTSHYGTAFTVTIEAAEGVTTGVSAKDRLTTVRA ASAEGAKPSDLHRPGHVFPLRAQNGGVLTRRGHTEATIDLVTLAGFRSAGVLCELTNDDG TMARAPEVIVFANKHNMPVVTIDDLVAYRQSQEKKAS >gi|316918029|gb|ADCU01000020.1| GENE 34 33425 - 34198 749 257 aa, chain - ## HITS:1 COG:STM3190 KEGG:ns NR:ns ## COG: STM3190 COG0428 # Protein_GI_number: 16766490 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Salmonella typhimurium LT2 # 1 257 1 257 257 321 77.0 8e-88 MSVPLILTLLAGGATFVGALLAIVGQKPSNRVLAFALGFAAGIMLLISLMEMLPAALDTQ GMSPMLGYGMFIIGLVGYFLLDRMLPHQHAHDLMDAPKAGKTRNLRRTAMLLTLGISLHN FPEGIATFVTASSDLELGMGIALAVAIHNIPEGLAVAGPVYAATGSKTKALWWASISGFA EILGGLLAFFLLGPAISPVFMASIMAMVAGIMVALSVDELMPLAKEIDPQNNPSYGVLCG MTVMGFSLTLLQSSPLG >gi|316918029|gb|ADCU01000020.1| GENE 35 34451 - 35236 849 261 aa, chain + ## HITS:1 COG:YPO0659 KEGG:ns NR:ns ## COG: YPO0659 COG3384 # Protein_GI_number: 16120984 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 260 1 260 260 424 77.0 1e-119 MTTSRMPALFLGHGSPMNVLEENDYTAAWRELGRTLPRPKAIIAVSAHWFTRGTFVTAME QPRTIHDFGGFPQALFDTQYPAPGAPDLARRVQQLLEPEMVHLDHSEWGLDHGTWGVLIK MYPDADIPVIQLSIDGTQPAAYHFALGKKLSALRDEGVMIVASGNVVHNLRMVKWQGDAE PYPWAFSFDNFVRENLAYKGEDHPLVNFMQHEGAELSNPSPEHFLPLLYVLGAWDGEEPI RVPVDGIVMASLSMLSVVVGE >gi|316918029|gb|ADCU01000020.1| GENE 36 35352 - 36572 965 406 aa, chain - ## HITS:1 COG:YPO4048 KEGG:ns NR:ns ## COG: YPO4048 COG0477 # Protein_GI_number: 16124166 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 3 406 4 407 409 461 63.0 1e-129 MPSYIAASKLTRRAVLFPLALVLFEFATYIAHDMIQPGMIHVVRDFNADVSWVPTSLTAY LFGGMMLQWLLGPLSDRIGRRPVMLTGVMLFVVACIATLFTTSIEQFILMRFIQGISLCF IGAVGYAAVQEAFDQTLSIKLMALMANVALIAPLIGPLAGAAFIQFAPWKSMFAVFALVA FVAWLGLWKGMPETAQSQGEKLRLKSLLADYRQVFGNLRFVCGAASIGFSALPLLAWVAI SPVILIDGEGLTPVAYGWLQVPIFMALIAGNLVLARIAGKMPIEKPLWLGAPPIIAGLAL AAFGTVFTPHAYLWTIAGLSLYAFGTGLINAGLYRLTLFASNMRKGTVAAALGMTTIGIY ALGIELAKRIYLWAGSGVFNVYGLISGLVWLGLMWVFLRKKPDAPA >gi|316918029|gb|ADCU01000020.1| GENE 37 36804 - 38639 1670 611 aa, chain - ## HITS:1 COG:YPO1532 KEGG:ns NR:ns ## COG: YPO1532 COG4264 # Protein_GI_number: 16121805 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Siderophore synthetase component # Organism: Yersinia pestis # 11 611 8 610 614 763 61.0 0 MTAHTQFSHLPLSEQNRHVIAHLTPELWSKANRLHVRKAIAEFAHERLITPKCIRHEASP EELADYQLAAPQGDVVYHFRARRLALEHWAIDAESLRKTQAGVEQELDSLSFIIEFKDVL GIPQEMLPTYMEEITSTLYSSAFKHLREGVLIEQLLDADFQTLEGAMMEGHPAFVANNGR IGFDAFDYQAYAPEAAAPINFVWLAAHKSKAHFASIEELSYQQLLEEELTPSVVDDFRQQ LMAQDLDPTDYIFMPVHPWQWQNKLTGIFAPDIAKRELVYLGIGDDNYQAQQSIRTFFNT SNSRKRYVKTALSILNMGFMRGLSPYYMATTPGINEWLAELIDNDACLRDYGFRMLREVA TIGYHNHYYESAVSGDTPYKKMMAALWRESPLALIQPNQRVMTMAALLHQDREGNALLPA MIQASGLETGEWLKRYLQSYLSPLLHCLYTYDLAFMPHGENLILVLENHTPVHVFMKDIA EEIVVMDPDANLPEKAKRVAVFVPDELKILSIFTDVFDGFFRFMAAILHEQGSYPQEQFW HRVAECVTDYQQAHPELAERFARYDMFSPAFTHSCLNRLQLANNRQMINLSDPSQNLKFA GQLDNPLVVFK >gi|316918029|gb|ADCU01000020.1| GENE 38 38636 - 39238 451 200 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227380191|ref|ZP_03863647.1| acetyltransferase, ribosomal protein N-acetylase [Kribbella flavida DSM 17836] # 5 185 6 188 193 178 48 2e-43 MSYVFEHQVAEVGDFALRPLDAIQDAELLHSWVSQPYARYWGMMEQSVEQVRDFYLDLLK HHPDGAFIGLYQGKPAFLLERYQAIHDPVGQCYPAQSSDYGMHILVAPADKPLSGFTWAV FQTIVAFMFSDERVARIVVEPDVRNEKIHRLNKRAGFVYQHQIELANKTAWLAFCDRDQH AAALRHDAQYHSVSRQETHA >gi|316918029|gb|ADCU01000020.1| GENE 39 39235 - 40575 1071 446 aa, chain - ## HITS:1 COG:YPO1530 KEGG:ns NR:ns ## COG: YPO1530 COG3486 # Protein_GI_number: 16121803 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Lysine/ornithine N-monooxygenase # Organism: Yersinia pestis # 15 440 2 426 432 632 68.0 0 MTQFSLSSQTGAATQPYDFIAIGIGPFNLGLACLTQPLSQVNALFLDQNTGFDWHPGMML ESAHLQTPFMADLVTLADPTHPLSFLNYIKQQGRLYSFYIRESFFLMRKEYNQYCRWATE RLSNLRFNTKVERVEYDQDSHCYHVHCSDTRNGQKLKFETRRLVLGTGPSPVIPDCCQPM AERMVHSGQYLHHKEELQTRRSITVVGSGQSAAEIYYDLLSEIDKYGYQLNWVTRAPRFF PLEYTKLTLEMTSPEYVDYFHQLPAEKRDQLNMQSQQLYKGINSSLINDIFDLLYIKRLD GHVNTRLFTNTALTGVQNTTKSKTLNLALHQHEQDQHFAINSEAVILCTGYRHQPPAFLQ PIHDRIAWDEKGRYDVARNYSIDTQHNEIFVQNAELHTHGFVTPDLGMACYRNSWILREI TGTEHYPIEEQIAFQQFAAPQTGDLL >gi|316918029|gb|ADCU01000020.1| GENE 40 40765 - 42939 2047 724 aa, chain - ## HITS:1 COG:STM0191 KEGG:ns NR:ns ## COG: STM0191 COG1629 # Protein_GI_number: 16763581 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Salmonella typhimurium LT2 # 60 724 68 729 729 404 36.0 1e-112 MKYNAFICSSLKAALPIGCLFLPLSAFAATEADTATSGNEDKIVVSAKASLPPLGSYENT GTKSDLTAQDTPQTINTVEGQELDERGISSLNEALRYVSGVTTENRGGAITRFDEFTIRG FKNSENYLDGLQLPYNEWNIQGQVDTYMLDRIEVMKGPASVLYGNASPGGIVNMISKKPQ KIQNTDVEFDTGSDNRREGKIDSTGQIGDSDVSYRFVGLAGASDGQAEGSKNERYLLAPS LRWDIDDNNSLLVQAFLQNDPKAGVYTSLPGEGTFKYSPYGKLPTDVYLGDHNWEAYKRK QESVGYQYDHRFNDDWSFTQKARFMHITAYQENTYSTGLAADGRTLGRRMYMTDESMDSF NIDNQIAGKFDTAFLRHNVLLGFDYQWQNNKTEYQDAVAPSIDIFDRDNSEINRGNIAWD PSLATNVRYSMHQNGYYWQDSIDLDKLTILAGGRYDQYEKRTYGLQYGADTDETFSQSKY TQRYGAMYHFDNGISPYVAYSEGFEPLAGRNKSGGSYKPETSKMWEGGVKFATPSQNTIF TAAVFDIKKENALTSNPNGVDPYEKYQSGEIESKGYEFEIRTSPLENLLLTANYAYTDVK ITEDANKSLIGNRPVQTAKDNASAWANYTIDDTFLRGLTIGAGIRYIGRMEANQSNTEQL PAVTLYDMAASYELGNLTPALDNATLKMAVNNITDKRYVASCYDSNNCWFGAERSVVVGV KYSF >gi|316918029|gb|ADCU01000020.1| GENE 41 43396 - 43773 181 125 aa, chain - ## HITS:1 COG:PA0563 KEGG:ns NR:ns ## COG: PA0563 COG3152 # Protein_GI_number: 15595760 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 1 121 1 115 117 127 55.0 6e-30 MEWFLKVVKENYANFNGRARRKEYWMFTLFSSIISIVLFVLMSIFSDSMLVIIFSILSIL YSLVILIPSLAVIARRLHDTNHSGWFYFIALIPLVGPIIMLITLCKEGTRGDNQYGADPK AGDLI >gi|316918029|gb|ADCU01000020.1| GENE 42 43880 - 44269 193 129 aa, chain - ## HITS:1 COG:ECs3986 KEGG:ns NR:ns ## COG: ECs3986 COG3152 # Protein_GI_number: 15833240 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 118 1 114 118 114 49.0 4e-26 MNWYINVLKNYATFNGRARRREYWMFSLFHTLILVLILYISMTFETDVSGFTAILFILYM LVTLIPHLAVLVRRLHDTNQSGWFYFISFVPFVGPIVLLIFLCKEGTKGDNHYGLDPKIE QLKNNFIIQ >gi|316918029|gb|ADCU01000020.1| GENE 43 44383 - 45174 399 263 aa, chain - ## HITS:1 COG:YPO1528 KEGG:ns NR:ns ## COG: YPO1528 COG4114 # Protein_GI_number: 16121801 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein # Organism: Yersinia pestis # 26 260 18 250 259 212 43.0 6e-55 MKITALTEFDTYLPAVFPAFPPEAEELTALFSQHYPHFLTTFLIDETASSHDLSAMQWSA TGTYAKLMSRYQHEHYAEFPDKSPEAKPLESLWAQWYFGLLVPPMMLLLLQHSAPLDPHI RQFKVRFHDSGRPEAFIYYPKLMSGETRNSTPLQRIVSLVERHLHPAVNAIARQGVLNAK LMWSNIGYVMHWYLGELRPLLGDATFSQLEHALFFTAAFPNGQENPLYRTVLMRNGTIQR RTCCQRYKLPKMKECGDCPLNLE >gi|316918029|gb|ADCU01000020.1| GENE 44 45445 - 46080 413 211 aa, chain - ## HITS:1 COG:YPO0425 KEGG:ns NR:ns ## COG: YPO0425 COG2199 # Protein_GI_number: 16120758 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Yersinia pestis # 3 209 176 380 390 182 45.0 3e-46 MTRILFVLALPIIALSLHRVITRRREAFTRQLVNQLERDKARFSDLSMIDPLTTLLNRRG LEFQFHHMSNDCATEHKDFVVMIDIDFFKLYNDHYGHQYGDTALTAIAQIIKEAVRSRDL AVRYGGEEFLLILRDASETLAIQICEHIRSHVEQLALINEYQPNGYSVVTISAGLSEMYN NNLENAIARADQALYLSKQKGRNRVSLQKVA >gi|316918029|gb|ADCU01000020.1| GENE 45 46798 - 47100 195 100 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVRFMLIVSIALLVVWGISLWAWRSLSGIWGISLPTLVLPLLIVSNLNLSFLKGMMVLAM LTTLAMLFNPRLRDYILLPSGLALAGGLATISLNYNYFGV >gi|316918029|gb|ADCU01000020.1| GENE 46 47787 - 48827 257 346 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative [marine gamma proteobacterium HTCC2148] # 78 335 106 369 371 103 29 8e-21 MSLFTPASEVILRHSEEFEPRRVLFAGDLQDTLPAQFEAAEVRVHTNQYHHWQQLSRTMG ERCQFGLTADADLVADCDTLIYYWPKSKQEAQFQLQNLFSLMPVGTELFIVGENRAGVRS AEGIIETFGPLVKIDSARRCGLYHGRLEKQCDFNLEDWWENYQTGSLTIATLPGVFSRDG LDIGSHLLLSSLEPHMKGKVLDVGCGAGVLSAAMAKMSPKVKLTLTDVSAAALESSRATL AANDIQGEVIASNVYSDVNGRFDMIISNPPFHDGMQTSLTAAETLIRGAAKQLQIGGELR IVANAFLPYPQLLDDVFGSHEVLAQTGRFKVYSARLGRAAIAKKKR >gi|316918029|gb|ADCU01000020.1| GENE 47 49036 - 49446 242 136 aa, chain + ## HITS:1 COG:YPO0428 KEGG:ns NR:ns ## COG: YPO0428 COG3050 # Protein_GI_number: 16120761 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, psi subunit # Organism: Yersinia pestis # 1 134 1 134 145 146 58.0 9e-36 MASRRDLLLQQLGITQWVLRRPTALHGEIAVSVSGSTRLLIVSAEPISPDDILLCDVLKA LMLSPEQAVILTPDQYAMLRDSEKYHVWWLGETSTTERDGVMLHSPALSALYHNSGAKRA LWQQICHDEQHFFPQG >gi|316918029|gb|ADCU01000020.1| GENE 48 49415 - 49882 290 155 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|91774768|ref|YP_544524.1| SSU ribosomal protein S18P alanine acetyltransferase [Methylobacillus flagellatus KT] # 2 154 1 153 153 116 39 1e-24 MMNNISSLKGEISPLTEADFNAAFEIERASHAFPWTEKTFLSNHGERYYNLKLECDGVLA AFAITQVVLDEATLFNIAVAPTQQRKGLGRGLLEALISDLEEKGIVTLWLEVRDSNRAAI ALYESLGFNEVSVRRHYYPTADGREDARIMALPLG >gi|316918029|gb|ADCU01000020.1| GENE 49 50042 - 51631 1771 529 aa, chain + ## HITS:1 COG:YPO0430 KEGG:ns NR:ns ## COG: YPO0430 COG4108 # Protein_GI_number: 16120763 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Yersinia pestis # 1 529 1 529 529 1001 91.0 0 MSPSEYAREVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWM EMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVE DRTRKLMEVTRLRDTPILTFMNKVDREIRDPMELLDEVENELRIVCAPITWPIGCGKSFK GVYHLYKDETYLYQTGKGHTIQEVRIVKGLDNPDLDAAVGDDLAEQLRGELELVKGAAAE FDKDDFLNGELTPVFFGTALGNFGVDHMLDGLVEWAPAPMPRKTDTREVSASEEKFTGFV FKIQANMDPKHRDRVAFMRVVSGRYEKSMKLRQVRTGKDVVISDALTFMAGDRSHLEEAY AGDIIGLHNHGTIQIGDTFTQGEDMKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLS EEGAVQVFRPIHNNDLIVGAVGVLQFEVVVARLKSEYNVEAIYESVNVSTARWVECDDVK KFEEFKRKNELNLALDGGDNLAYIAPTMVNLNLASERYPEVKFRKTREH >gi|316918029|gb|ADCU01000020.1| GENE 50 52156 - 52770 765 204 aa, chain + ## HITS:1 COG:YPO0431 KEGG:ns NR:ns ## COG: YPO0431 COG2823 # Protein_GI_number: 16120764 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Yersinia pestis # 1 203 1 203 204 187 68.0 2e-47 MKNTKFARSMMAIVLGSVLVSGSAMAEETLMQKAQSAADSTGAKIDSSMKKVDGYMDDSG ITAKVKSALVDAKDIKSNDISVNTSKGVVTLNGFVSSQDQAERAVTLAKGVEGVKSVSDK LHVKDSTKSSVKGYASDTAITSEVKAKLLADDLVPSRNVKVETQDGLVQLSGTVKTKAQS DRAESVASAIEGVKSVKNDLTVKQ >gi|316918029|gb|ADCU01000020.1| GENE 51 52898 - 53059 236 53 aa, chain + ## HITS:1 COG:YPO0432 KEGG:ns NR:ns ## COG: YPO0432 COG5487 # Protein_GI_number: 16120765 # Func_class: S Function unknown # Function: Small integral membrane protein # Organism: Yersinia pestis # 1 52 1 52 53 59 94.0 2e-09 MFRWGIIFLIIALIAAALGFGGLAGTAAWAAKVVFVVGIILFLVSLFTGRRRP >gi|316918029|gb|ADCU01000020.1| GENE 52 53171 - 53359 120 62 aa, chain + ## HITS:1 COG:no KEGG:Spro_0655 NR:ns ## KEGG: Spro_0655 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 56 1 56 61 66 58.0 3e-10 MNGDIVVGKWKQIRGQVRSTLAEWLGHDGEWLAGNNDCLLGLLQEDYGIAQDRVSSEDVK IH >gi|316918029|gb|ADCU01000020.1| GENE 53 53370 - 54584 820 404 aa, chain + ## HITS:1 COG:YPO0433 KEGG:ns NR:ns ## COG: YPO0433 COG4667 # Protein_GI_number: 16120766 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Yersinia pestis # 1 330 2 333 423 519 74.0 1e-147 MGYRIPITLGNIEPLAYKPYQPGKIALVCEGGGQRGIFTAGVLDEFLRARFNPFDLYLGT SAGAQNLSAFVCGQPGYARRVITRYTTSIDFFNPLRFVRGGHLIDLDWLIEATANDLPLA MDYAEQHLGDDRQLLMCASRSEDFAPTYFPAKRDNWLEVIKASSAIPGFYRWGVELDGVS YHDGGISDAIPVREAHRRGADTIVVIRTVPSQMFYTPKWMRRMEAMLGESSLQQMVKMLQ YHEKSYRRIQRFIEKPPGKVRVFEIYPPKPLASHALGSKVAALNADYHLGRRCGRYFLAT VGHWLLPRENHPNTSKKLASRRLLQPSDTIAPEVPIVAASHSAAKAGILLPEPQTNMVAE KSLILPDSVHLDKSTRQKGADPEGSVTPANQQHTDKPTSQDSTS >gi|316918029|gb|ADCU01000020.1| GENE 54 54581 - 55396 381 271 aa, chain + ## HITS:1 COG:yjjVm KEGG:ns NR:ns ## COG: yjjVm COG0084 # Protein_GI_number: 16132266 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli K12 # 13 267 4 258 259 313 61.0 2e-85 MSEGMDEMGRHIRFIDTHCHFDFPPFSGNESDSIALAYAQGVRHIIVPTISAERFQRVLT LVNLHPMLFAAVGLHPLYIEQHIEQDVEHLSDVLASKPNRLVAVGEIGLDLFMDNPQLER QLAILRAQLKLAKHHDLPVILHSRRSHDQLSRELRAVNLSRGGVVHGFSGSLSQAQAFIK LGYFIGVGGTITYDRAHKTRQVIAELPLSTLLLETDAPDMPLSGYQGQPNRPERVRKVFE ALCELRPEPSAMIAETIWQNTCRLFGISASF >gi|316918029|gb|ADCU01000020.1| GENE 55 55612 - 56889 1379 425 aa, chain + ## HITS:1 COG:YPO0435 KEGG:ns NR:ns ## COG: YPO0435 COG1972 # Protein_GI_number: 16120768 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Yersinia pestis # 3 425 1 423 423 595 91.0 1e-170 MQLIMSVVGMAVLILIAVLISSNRRAINLRTVAGAFLIQVVIGAFVLYVPAGRDVLGAMS SGVANVIAYGNQGISFIFGGLVSDKMFEVFGGGGFVFALRVLPVIVFFSSLIAVLYYLGI MQIVIRLLGGGLQKVLGTSRTESLSATANIFVGQTEAPLVVRPYISTMTQSELFAVMCGG LASVAGSVLAGYAQMGVPLEYLIAASFMAAPGGLLFAKLIVPETEKTHDKTDAAELIAEE DRPANVIDAAASGAASGMQLALNVGAMLLAFIALIALINGMLGGIGGWFDYPQLSLELIL GWVFSPIAYLIGVPWNEAQIAGSFIGQKIIVNEFVAFMNFGEYLKADAEVAAAGLQVLSD HTKAIISFALCGFANLSSVAILLGGLGSMAPTRRHDIARFGLKAVAAGTLSNLMSATIAG FFLAL >gi|316918029|gb|ADCU01000020.1| GENE 56 56932 - 57465 436 177 aa, chain - ## HITS:1 COG:no KEGG:ETAE_0439 NR:ns ## KEGG: ETAE_0439 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 172 1 172 173 257 73.0 1e-67 MSSYEWFAQGVGVVAFLVGITTFFNRNELRFKYQLSIYSAIIGLHFFLMGAHSASAAAEL NAVRTVISTRTRSNWVMLVFIVLTLGFGGYSLQHAMELLPIIGTVASTWALFRTRGLTTR CVMWCSTACWVTHNIWLGSIGGSLIEGSFLLMNGFNIIRFHRMQRRGIDPFKVEKKA >gi|316918029|gb|ADCU01000020.1| GENE 57 57587 - 59086 1404 499 aa, chain - ## HITS:1 COG:YPO0581 KEGG:ns NR:ns ## COG: YPO0581 COG2721 # Protein_GI_number: 16120910 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Yersinia pestis # 4 499 1 496 496 858 81.0 0 MQNMQSVIKIHPLDNVAVALRDLSAGETIDVESLSIVLPADIARGHKFALTPIAQGDMIV KYGLPIGHALTAIAAGEHIHSQNAKTNLNDLDQYQYQPDFANLPAQMADREVQIYRRKNG DVGIRNELWILPTVGCVNGMARQMLTRFMKETGDAEGIDGAYLFTHPFGCSQLGDDHINT CTMLQNMVRHPNAGAVLVVGLGCENNQIAAFRETLGEYDAERVHFMVCQQQDDEVEAGIE HLHQLYQVMRNDRRESGKLSELKFGLECGGSDGLSGITANPLLGRFSDYVIANGGTSVLT EVPEMFGAERILMSRCRDEATFKKTVEMVNNFKQYFIEHNQPIYENPSPGNKAGGITTLE EKSLGCTQKAGQSQVIDVLRYGERLKASGLNLLSAPGNDAVATSALAGAGCHMVLFSTGR GTPYGGFVPTVKLATNTEIATKKPHWIDFDAGQLLHGKTMDQLLISFVDMIVDIANGHQT RNEINDFRELAIFKSGVTL >gi|316918029|gb|ADCU01000020.1| GENE 58 59105 - 60580 1311 491 aa, chain - ## HITS:1 COG:YPO0580 KEGG:ns NR:ns ## COG: YPO0580 COG0246 # Protein_GI_number: 16120909 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Yersinia pestis # 1 488 1 483 483 775 75.0 0 MQTLNRRDFPGRQHPDKVIQFGEGNFLRAFVDWQLDLLNEHTDLNAGVVVVRPLNSDFPP SLSTQDGLFTTIIRGLNEQGEAVRESRIIRSVNREINMYQDFDAYLALAHDANIRFVFSN TTEAGISYVPEDKLTDTPPASFPAKLTRLMYERFCHFDGAADKGWVLLPCELIDYNGEAL RELVLRYAQQWDLPSSFVQWLEQNNTFCSTLVDRIVTGYPRGEVEALTEELGYQDAFLDT AEHFYLFVIQGPQSLAQELRLDAFAKNHKPLNIRIVDDIKPYKERKVAILNGAHTALVPV AFLAGLNTVGESMNDVQVTEFVEKAISQEIMPVLDLPADELKSFADAVLSRFRNPFIQHQ LLSIALNGMTKYRTRILPQVIAYQHKTGKLPQRLCFALAALIAFYRGERNGETYPLQDDA HWLERYRTGWDAVQAGSQNLNDLVHTILSDADHWGQDLNQIPEMTQTIAGYLQQIDQQGM RSAVSSLSAVA >gi|316918029|gb|ADCU01000020.1| GENE 59 60690 - 62102 1263 470 aa, chain - ## HITS:1 COG:YPO0579 KEGG:ns NR:ns ## COG: YPO0579 COG1904 # Protein_GI_number: 16120908 # Func_class: G Carbohydrate transport and metabolism # Function: Glucuronate isomerase # Organism: Yersinia pestis # 2 470 1 469 469 842 84.0 0 MMSQFLTEDFLLDTEFARRLYHDYAAEQPIFDYHCHLPPEQIAQDYRFKNLYDIWLKGDH YKWRAMRTNGVAERLCTGDASDREKFQAWAETVPHTIGNPLYHWTHLELRRPFGITGTLL SGNTADDIWNRCNALLERDEFSARGIMKQMNVKMVGTTDDPIDDLSHHKAIALDRSFDVK VLPSWRPDKAFNIDAAIFPEYMQKLSAAADVDIRKFSDVCDALKIRMDHFAAHGCKVSDH ALDVVMYGEADETTLNGILARRLEGKMPTEQEVAQFKTAVLLFLGAEYQKRGWVQQYHIG ALRNNNSRMFETVGPDIGFDSIHDAPVAFALSRLLDAQSRSTSLPKTILYCLNPRDNEVI GTMIGNFQGEGMAGKMQFGSGWWFNDQKDGMQRQMTQLAQLGLLSRFVGMLTDSRSFLSY TRHEYFRRILCQMIGRWVEDGEAPADIELLGNMVKNISFDNAKNYFAIEL >gi|316918029|gb|ADCU01000020.1| GENE 60 62728 - 64023 1392 431 aa, chain + ## HITS:1 COG:YPO0577 KEGG:ns NR:ns ## COG: YPO0577 COG0477 # Protein_GI_number: 16120906 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 419 2 420 434 721 90.0 0 MRKIKGLRWYMIALVTVGTVLGYLTRNAIAVAAPTLQDTMHITTQQYSYIIAAYSACYTI MQPVAGYVLDVLGTKVGYALFAILWAVFCMGTALASSWGGLAIARGAVGMAEAAMIPAGL KASSEWFPAKERSIAVGYFNVGSSIGGMIAPPLVVWAIVAHSWEMAFIITGALSLIWAIC WLIFYKHPKDQKKLSDEERDYILSGQEAHHQTNNAKRMSAWEILRNRQFWGIALPRFLAE PAWGTFNAWIPLFMFKAYGFNLKEIAMFAWMPMLFADVGCVLGGYLPPLFQKYFKVNLIV SRKLVVTMGAFLMIGPGMIGLFTSPYAAIALLCVGGFAHQSLSGALITLSSDVFGRNEVA TANGLTGMAAWTASTLFALVVGALADTIGFSPLFAALAVFDLLGALVIWTVLQNRTAEEV EIEANRQKATV >gi|316918029|gb|ADCU01000020.1| GENE 61 64209 - 64982 621 257 aa, chain + ## HITS:1 COG:YPO0576 KEGG:ns NR:ns ## COG: YPO0576 COG2186 # Protein_GI_number: 16120905 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 255 1 254 264 425 84.0 1e-119 MEFTEPRRLYQQLAAELKQRVESGVYPVGEKLPAERFIAEEMNVSRTVVREAIIMLEVEG YVEVRKGSGIHVISNQPKTLIQPNSNIQFASAGPFELLQARQLIESNIAEFAATQVTKQD IVALMEIQEHARQEDRFRDSEWDLKFHVQVALATQNSAMATIVEQMWSQRIHNPYWLKLH EHIDDVSIDSWCEDHDKILKALMRKDPYGAKVAMWQHLENTKQMLFQATTDDFEFNVDRY LFAENPVVHLDGVTNGK >gi|316918029|gb|ADCU01000020.1| GENE 62 65346 - 65741 365 131 aa, chain + ## HITS:1 COG:VC0060 KEGG:ns NR:ns ## COG: VC0060 COG0239 # Protein_GI_number: 15640092 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Vibrio cholerae # 7 126 6 125 126 84 46.0 4e-17 MSYGLTLLIVAFGGAVGAITRFQITTWFSGWFGTSFPYATLTVNVVGCFIMGVLVAALNT GTLIAPHWRPLIAVGFLGALTTFSTFSFDTFALFTEGFWLRAALNVILNLVLCMLAVAAG YALLTRGSMPG >gi|316918029|gb|ADCU01000020.1| GENE 63 66165 - 66494 117 109 aa, chain + ## HITS:1 COG:no KEGG:ETAE_0431 NR:ns ## KEGG: ETAE_0431 # Name: not_defined # Def: putative lipoprotein # Organism: E.tarda # Pathway: not_defined # 11 99 60 149 154 78 50.0 8e-14 MQLTGESERSLSRKSNTRKLTALLRVHLKSCSEQGRIAPTLPDASLPAHSDTAFFDVTRQ YRDKGISLALLRTLQLPPHQNRLGGWKESNILYRGKLTYDQPDAEAYVG >gi|316918029|gb|ADCU01000020.1| GENE 64 66587 - 67264 604 225 aa, chain + ## HITS:1 COG:YPO0574 KEGG:ns NR:ns ## COG: YPO0574 COG0586 # Protein_GI_number: 16120903 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Yersinia pestis # 1 218 1 218 232 323 80.0 2e-88 MDMINELIHALWQQDYETLANPSLVWTIYGILFVILFLENGLLPAAFLPGDSLLILVGVL IAKGTMGFAMTVCVLTTAASLGCWVGYIQGRWLGNTRLVQKWLSHLPAHYHQRSHHLFHK HGLSALLVGRFLAFVRTLLPLIAGLSGLSSTRFQFFNWMSGFLWVMILTTLGYVLGKTPL FLRYEDQLMFLLMMLPLVLLVFGLVGSLVVLWRKKHSTTQPEQRK >gi|316918029|gb|ADCU01000020.1| GENE 65 67266 - 67667 291 133 aa, chain + ## HITS:1 COG:no KEGG:ETAE_0429 NR:ns ## KEGG: ETAE_0429 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 7 119 11 123 137 133 63.0 2e-30 MTLLLIQRLGWKRALLLLALIIGVFAWWIAPHLTHKETTLQISATQAGLATPDGFFVYQK LDEHGISIKSITPDSNGLLVHLAKPEQQEEAMQVLQSVLPRGYSIAYKTHRRSLFQSSES DVKDPPRQARLNS >gi|316918029|gb|ADCU01000020.1| GENE 66 67931 - 68320 427 129 aa, chain + ## HITS:1 COG:no KEGG:ROD_47901 NR:ns ## KEGG: ROD_47901 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 21 124 15 118 122 75 50.0 4e-13 MTFKKTAILAITVATFGLLSTAANASAVTCASKQQSIEEQIQYAQQHNNTHRVAGLQKAL SEVKSHCTEAGLRSELQNNVKEKQQKVAERQQELVEAQQTGKADKISKKEKKLDEARAEL KEAQQALGQ >gi|316918029|gb|ADCU01000020.1| GENE 67 68457 - 68762 391 101 aa, chain + ## HITS:1 COG:YPO0570 KEGG:ns NR:ns ## COG: YPO0570 COG4575 # Protein_GI_number: 16120899 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 101 1 101 101 135 80.0 1e-32 MANDSTSEQLRAELKSLADTLEEVLNSSTDKPKAELEKIRAKAESALQGSRARLNAAGEK VAAQTKEIADRADSYVHDNPWTGVGIGAAVGVVLGVLLARR >gi|316918029|gb|ADCU01000020.1| GENE 68 68762 - 69163 368 133 aa, chain + ## HITS:1 COG:YPO0569a KEGG:ns NR:ns ## COG: YPO0569a COG5393 # Protein_GI_number: 16120898 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 3 131 2 130 131 144 72.0 4e-35 MSADNTTSQGPARGVLSTAQRIVTIIVGMVETRLRLAVVELEEEKANVIQLLMMAGVTLL FTAFGLMTLLVLLFLAIDPVHRLMALGITTAVLLGLALIGAIWTITKARRSTLLGATRRQ LEIDRELLEEDRK >gi|316918029|gb|ADCU01000020.1| GENE 69 69160 - 69453 225 97 aa, chain + ## HITS:1 COG:no KEGG:YE3717 NR:ns ## KEGG: YE3717 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 4 93 2 91 94 85 51.0 7e-16 MSRNRQELALEKARLLRQIQQQRLDLAGERRSWLQLTAKFDHRVSAVMRLRKFMLLGSSL LALYGARHPAKTARWTRRAFSVWGIVKVIRNAFYPKA >gi|316918029|gb|ADCU01000020.1| GENE 70 69755 - 70150 436 131 aa, chain + ## HITS:1 COG:ECs3983 KEGG:ns NR:ns ## COG: ECs3983 COG2259 # Protein_GI_number: 15833237 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 131 30 160 160 199 85.0 1e-51 MSNKLENIALLAARILMPILFITAGWGKITGYAGTQQYMEAMGVPGALLPLTILLELGGG LAILFGFLTRTTALFTAGFTLLTAFLFHSNFADGVNQLMFMKNLTIAGGYLVLAVSGPGA FSIDRLLNKKW >gi|316918029|gb|ADCU01000020.1| GENE 71 70286 - 71272 906 328 aa, chain + ## HITS:1 COG:STM3233 KEGG:ns NR:ns ## COG: STM3233 COG0435 # Protein_GI_number: 16766532 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 327 1 327 328 538 75.0 1e-153 MGQLVEGIWQDVWYDTKSTGGRFKRSNAQFRNWITPDGSLGPNGESGFAAEKDRYHLYVS LACPWAHRTLLVRKLKGLESLIPVSVVSPLMLENGWTFETNFPAATGDELYHHDFLYQLY LQADPYYTGRVTVPVLWDKQTQTIVSNESSDIIRMFNTAFDEIGAKPGDFYPQELRTEID ELNSWIYDTVNNGVYKAGFATAQDAYDESVSAVFTSLDKLENILSRQRYLTGTRLTEADL RLWTTLVRFDPVYVTHFKCDWQRISDYPNLYSFLRDIYQIPGVKETVNLEHIRHHYYRSH KTINPTGIISIGPKQDLEAPHGRDKPFS >gi|316918029|gb|ADCU01000020.1| GENE 72 71533 - 72261 356 242 aa, chain - ## HITS:1 COG:yjjW KEGG:ns NR:ns ## COG: yjjW COG1180 # Protein_GI_number: 16132196 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli K12 # 2 242 47 287 287 327 65.0 1e-89 MCDNCGDCVTTCPHQALSLVSGKVQWDADVCQQCDTCLQTCTQHSSPMTQSYSVNALLIQ VKRNAPFINGVTISGGEATLQLPFLCDFFAAIKSSQELAHLTCLVDSNGDLSETGWQKLL PWIDGAMLDLKAWDNECHRALTGRDNYRIKQSILWLAKRGKLSELRLLVIPEHSDHLQHA DELAEFILSLGDVPVRLNAFHHHGVRGEASGWKSATQQDIETLAEALTQRGVKQITRPAL YL >gi|316918029|gb|ADCU01000020.1| GENE 73 72266 - 72457 78 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVYGLWQFLQRRLHPCRKMARRLPGPSTQENGKILLTEAHRLFMAYHSWLALHDTGVFGC FFT >gi|316918029|gb|ADCU01000020.1| GENE 74 72368 - 73930 1287 520 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_5004 NR:ns ## KEGG: ECUMN_5004 # Name: yjjI # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 15 520 11 516 516 855 78.0 0 MTNSIDTTSLPSFLQRCQQIATSETLSPEQKRHFLALEAENALPYPSLPPEARQALDDSV ICDMFEGHAPYKPRYVLPDYVKFLAQGSEYLELEPAQDFDDALNMLCILYHHVPSVTSMP VFLGHLDSLLLPYVGILTENELYIRIKRFWRYLDRTLPDAFMHANIGPSDNILTRLILRV DAELKQVAPNLTFIYDPQITPQSLLLQAASNICECSKPHIANGPIHDSIFTKNGYGIVSC YNSLPLAGGGNTLVRINLKQVALRSESSEDFFTHQLPYYCRQQIEIINARTDFLYNKSNF FTQSFLVSEGLIDPQRFVPMFGIYALAEAVNILMEKDGLTGSYGENDAANQLGYRISNQL AEFVAQTPVQHGWKQRAMLHAQSGISSDIGTTPGARIPYGTEPDPVTHLMTVAPHHAYYT SGISDILTLEETIKRNPEAMMQLCLGGFAAGMREFSANVCGNDLVRITGYMVRLSDIEKF KAEGSRLNTTWLGEEAAKNTGIMQRQPRVISHEQTMRFGK >gi|316918029|gb|ADCU01000020.1| GENE 75 74376 - 75155 857 259 aa, chain + ## HITS:1 COG:YPO0436 KEGG:ns NR:ns ## COG: YPO0436 COG0274 # Protein_GI_number: 16120769 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Yersinia pestis # 1 259 1 265 265 384 78.0 1e-106 MTDLKVAAKRALQLMDLTTLNEDDTDEKVIALCHQAKSPVGNTAAVCIYPRFIPIARKTL REQGTPEIHIATVTNFPHGNDDIAIALAETKAAIAYGADEVDVVFPYRALMAGNEQVGFD MVKVCKDACNEAGVLLKVIIETGELKDAALIRKASEISIKAGADFIKTSTGKVPVNATLE SAEIMMTVIRDMGVSKTVGFKPAGGVRTAEDAAEYLALAGRLLGDDWADSRHFRFGASSL LASLLKTLGYDTKGTGSAY >gi|316918029|gb|ADCU01000020.1| GENE 76 75388 - 76710 1434 440 aa, chain + ## HITS:1 COG:STM4568 KEGG:ns NR:ns ## COG: STM4568 COG0213 # Protein_GI_number: 16767809 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Salmonella typhimurium LT2 # 1 440 1 440 440 723 85.0 0 MFLAQEIIRKKRDGHALSEEEIRFFINGIRDNTISEGQIAALAMTIFFHDMVMPERVALT MAMRDSGTVLDWKALNLDGPIVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHT GGTLDKLEAIPGFDIFPDDARFRKIISEVGVAIIGQTNSLAPADKRFYATRDITATVDSI PLITASILAKKLAEGLDALVMDVKVGSGAFMPTFELSEALAQSIVGVANGAGCKTTALLT DMNQVLASSAGNAVEVRESVQFLTGEYRNPRLLEVTMALCVEMLISGNLAADQQDARNKL QAVLDNGKAAEVFGRMVAAQGGPADFVERYDSYLPKATLSKPVFAEHSGIITAMDTRELG MSVVGLGGGRRRATDSIDYSVGLTDMVRLGDNVDAQRPLAIVHASDEASWQQAAQAVRSA IVLGDKAPAENPVVYRRITE >gi|316918029|gb|ADCU01000020.1| GENE 77 76819 - 78042 1326 407 aa, chain + ## HITS:1 COG:YPO0439 KEGG:ns NR:ns ## COG: YPO0439 COG1015 # Protein_GI_number: 16120770 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Yersinia pestis # 1 407 1 407 407 769 91.0 0 MKRTFIMVLDSFGIGASEDAERFGDVGSDTLGHIADACARGEADIGRKGPLTLPNLSRLG LGKAAEESTGRFPQGLDKNAEIIGAYGYASELSSGKDTPSGHWEIAGVPVLFDWGYFSDH ENSFPQELLDILVKRGNLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIAC HEETFGLDRLYELCEIAREELTKGGYNIGRVIARPFVGDKPGEFKRTGNRHDLAVEPPAP TMLKKLVDEKGGEVVSIGKIADIYANVGITQKVKATGIDALFDATLVEMEKAGDNTIVFT NFVDFDSSYGHRRDVAGYAAALELFDRRLPEMLKLVKDDDIIIFTADHGCDPTWAGSDHT REHIPVLVYGPKVKPGSLGHRETFADIGQTVANYFGLSPMDYGKSMF >gi|316918029|gb|ADCU01000020.1| GENE 78 78137 - 78871 890 244 aa, chain + ## HITS:1 COG:STM4570 KEGG:ns NR:ns ## COG: STM4570 COG0813 # Protein_GI_number: 16767811 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Salmonella typhimurium LT2 # 1 239 1 239 239 436 91.0 1e-122 MATPHINAEMGDFADVVLMPGDPLRAKHIAETFLQDVRQVNSVRGMLGFTGTYKGRKISV MGHGMGIPSCSIYAKELITDFGVKKIIRVGSCGAVRMDVKLRDVVIGMGACTDSKVNRLR FKDHDYAAIADFDMVRNASDAAKAKGINARVGNIFSADLFYTPDPSMFDVMDKYGILGVE MEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAEERQTTFNDMIEIALESVLLGDAEE AAAK >gi|316918029|gb|ADCU01000020.1| GENE 79 78994 - 80244 730 416 aa, chain - ## HITS:1 COG:no KEGG:ESA_00658 NR:ns ## KEGG: ESA_00658 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 36 416 24 401 401 340 49.0 6e-92 MLHGTYRHMRSSMAKKSIFSSFIPAGVMLPLIMCTAPVFAASFDCENAGNSIEHAICDTT SLSALDSSLNESYQIAMSNLPTTQANELRTAQRNWIKQRNGCAANPERLESCLQKSMAQR DRELQEIAGQATSTLDNIIRGIPANPAIAAQKLALYRSPLASAWLVYLHQFEPSSQITDA EAAQRYQQAVKGLGSSWAGELLHDIEKDPATTKNSATLTLLRMTIEQNENHYREIINGKE REYAHCFIFKRQGKAAYDTFGALYGSSLDGNAPICSPQGDLFQRPAWKQLNDAMATIVDK ASLDMGTIRSASYADWRMFDLHVTVSPRDFLKSEPNMTTANSPESEIQAWNDKEWPKQER DAVLNAANEARKTTAQWLVTEQHFTKTDAEKAANAIVQDWLTMRLNFIGESPLSDE >gi|316918029|gb|ADCU01000020.1| GENE 80 80399 - 81442 610 347 aa, chain + ## HITS:1 COG:no KEGG:PC1_0654 NR:ns ## KEGG: PC1_0654 # Name: not_defined # Def: hypothetical protein # Organism: P.carotovorum # Pathway: not_defined # 6 343 8 350 355 322 52.0 1e-86 MKRIHKLTLLLAAVSSMPAWAASGVSFDHKDWEVTCDNTLTCRAAGYSTEEQPSGSILFT RKAGPNTPISGEVILAEVESADKTPKKLTMWIDDKFEGEAKAGKNDIWHLSAVQNQKLIR ALKGTGKVEFRGAPDPFILSGDGAYAVMLKMDDVQGRIGTPDAMVKKGDKPEDSVLAAIP APVIQAGQTETGKERPLTAPELAALKPKLVSTLTPDDGCDRLQPSPDDTAESDEGITLTP LDKTHALLSTLCWRAAYNEGYGYWVIDNALKEKPVMVTDSGTSYDAGVISLSQKGRGPAD CMSMASWVWDGQAFRQSKVADTGMCRYIRLGGTWDLPTFIADVKPAR >gi|316918029|gb|ADCU01000020.1| GENE 81 81534 - 82940 1282 468 aa, chain - ## HITS:1 COG:STM3091 KEGG:ns NR:ns ## COG: STM3091 COG0477 # Protein_GI_number: 16766392 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 11 467 6 462 464 709 81.0 0 MSTTVSTHPGRKARSNASLTFFVCFLAALAGLLFGLDIGVIAGALPFISETFQITSSQQE WVVSSMMFGAAVGAVGSGWLNFRIGRKYSLMIGAVLFVVGSLCSAFAPDVEILIVSRVLL GLAVGIASYTAPIYLSEIAPEKIRGSMISMYQLMITIGILAAYLSDTAFSYTGAWRWMLG VITIPAVLLLIGVFFLPDSPRWLAARGSDEKARRVLEKLRDTSEQAKNELDEIRESLKVK QSGWALFVNNKNFRRAVYLGVLLQVMQQFTGMNVIMYYAPKIFDLAGFASTSQQMWGTVI VGLVNVLATFIAIGLVDRWGRKPTLILGFIVMALGMGTLGTMMNIGISSVFAQYFAVIML LIFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNSLGSA HTFWVYAGLNIIFIFITLALIPETKNISLEHIERNLMQGKPLRKIGSK >gi|316918029|gb|ADCU01000020.1| GENE 82 82977 - 83204 93 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLRIYGLNVSAPDHRNVIVYTSVVFTAIVNGCVVMDLFTVNMDYSIEFYDFLSMVCDGYI FVLMFIKYTLIIFLV >gi|316918029|gb|ADCU01000020.1| GENE 83 83317 - 84471 1339 384 aa, chain - ## HITS:1 COG:ECs3818 KEGG:ns NR:ns ## COG: ECs3818 COG0192 # Protein_GI_number: 15833072 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Escherichia coli O157:H7 # 1 384 1 384 384 722 91.0 0 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTN AWVDIEELTRKTVAEIGYVSSDMGFDANSCAVLSAIGKQSPDINQGVDRTDPLEQGAGDQ GIMFGYATNETEVLMPAPITYAHRLMERQAEVRKNGTLPWLRPDAKSQVTFLYDDGKIAG IDAVVLSTQHSDSISLPDLQEAVMEEIIKPVLPPEWLSSNTKYFINPTGRFVIGGPMGDC GLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVS YAIGVAEPTSIMIETFGTEKISTEQLTLLVREFFDLRPYGLIQMLDLIQPIYRQTAAYGH FGREHFPWEKTDKAALLREAAGLK >gi|316918029|gb|ADCU01000020.1| GENE 84 84675 - 84812 57 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQNEILLKTVSERLRRCKGSVLDINSAHLIKARSKNDWNVMAGLA >gi|316918029|gb|ADCU01000020.1| GENE 85 85515 - 87491 1899 658 aa, chain + ## HITS:1 COG:YPO0929 KEGG:ns NR:ns ## COG: YPO0929 COG1166 # Protein_GI_number: 16121234 # Func_class: E Amino acid transport and metabolism # Function: Arginine decarboxylase (spermidine biosynthesis) # Organism: Yersinia pestis # 3 658 4 659 659 1198 87.0 0 MSNELSQRPQEAAGHHHLRSMQEVAMNDRNASKMLSTYNVAYWGGNYYDVNELGHISVCP DPDVPEARVDLTQLVEKLQKESNQRLPALFCFPQILQHRLRSINAAFKRARESFGYEGGY FLVYPIKVNQHRRVIESLVNSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYI RLALIGEKLGHKVYLVIEKMSEIKLVMEEAERLNVVPRLGVRARLSSQGSGKWQSSGGEK SKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQLANIRDIATGVRESARFYVELHKL GVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWGIGDACNEHGLPHPTVITE SGRAVTAHHTVLVSNVIGVERNEFHAPIAPAEDAPRALQSLWATWEEMQDSGTKRSLREW LHDSQLDLNDVHSQYAHGILDLTQRAWAEQQYLTICSQIQEHLDPSNRAHRPIIDELQER MADKLYVNFSLFQSMPDAWGIDQLFPVLPLSGLDQAPERRAVLLDITCDSDGAIDHYIDG DGIATTMPMPQYDPENPPLIGFFMVGAYQEILGNMHNLFGDTASVDVFVFEDGSVEVQDS DEGNTVAEMLEYVQLDPEVLLTRFRDQVRKTDLAPELQTQFLDEFESGLYGYTYLEDE >gi|316918029|gb|ADCU01000020.1| GENE 86 87621 - 88520 693 299 aa, chain + ## HITS:1 COG:NMB1824 KEGG:ns NR:ns ## COG: NMB1824 COG0613 # Protein_GI_number: 15677660 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Neisseria meningitidis MC58 # 4 266 2 251 278 71 27.0 2e-12 MEKIDLHMHSHYSDDADYPVAELIARCLREGVTTLAVTDHNSAFSFAESIKWRSDSLNII SGIEIDCTFQGRNFHLLGYGFTPSDDFSLVYENFNNIQRELVPVKLTKLRELGFFIDDEH LVRLANGRLPQEEQMGEAILEDERNADNPLLLPYRSGGERADMPLINFYWDFFGPNKACY QPVTYPALEDMADLIRNNGGIPVIAHIGANQKEEHEAMLELMLESGVAGIEVFSSYHDEA LAQRLYNFACEQGAYVTCGSDFHGRNKPKIEVGTCQYNREQLAEIQRFIDVVSKGSHQA >gi|316918029|gb|ADCU01000020.1| GENE 87 88675 - 89595 915 306 aa, chain + ## HITS:1 COG:ECs3812 KEGG:ns NR:ns ## COG: ECs3812 COG0010 # Protein_GI_number: 15833066 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 551 89.0 1e-157 MSTLGNKPDNSLVSNAFGFLRFPLNFQPYDSDADWVITGVPFDMATSGRAGGRHGPAAIR QVSTNLAWEGNRWPWNFDLRDRLNVVDCGDVVFSFGDAQDMSDSLQAHTEKLLESGKRCL TFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGSKFDHGTMFFHAPNEGLIDPNH SVQIGIRTEFDRDNGFTVLDAAQVNDRGVDDVLAQIKQIVGDMPVYLTFDIDCLDPAFAP GTGTPVIGGLTSDRALKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQ ADKKGE >gi|316918029|gb|ADCU01000020.1| GENE 88 89643 - 89795 62 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCKIIAVHPMHYAQILCLQNHKVGESVFASTSRPISMKIYLLLPQRAQQN >gi|316918029|gb|ADCU01000020.1| GENE 89 90090 - 90791 429 233 aa, chain + ## HITS:1 COG:no KEGG:Maqu_2145 NR:ns ## KEGG: Maqu_2145 # Name: not_defined # Def: hypothetical protein # Organism: M.aquaeolei # Pathway: not_defined # 37 233 8 203 204 149 40.0 8e-35 MDFFVKKVLGLFFCVGCILLILAGYMLYSSMQFQKTALRAEGVVTEVRYERSSDSKGSYH PVVAFNTNQNKRIVFESSTGSSSYRGTEGNSIEVLYAADAPENAEINDALSQWIAPIILG GMGIVFAGIGFVPFLIMRVRSRQGARLLHEGVPIDAQIIGVELNQAIQFNGLSPYRIKSQ WLDKNTNQVFVFYSDNIKFDPSSYIQSESITVYIDKNNPKKYHMDISLLPKIA >gi|316918029|gb|ADCU01000020.1| GENE 90 90828 - 91442 420 204 aa, chain + ## HITS:1 COG:PA0537 KEGG:ns NR:ns ## COG: PA0537 COG1704 # Protein_GI_number: 15595734 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 20 204 18 202 202 220 60.0 1e-57 MNKLTLFRLLCSFWIIFALSGCGYDDIQSDDENVNATWAEVLNQYQRRADLVPNLVASVK GYATHESEVFAQIAEARAKIGGLPNMQQAPQDEQSIKQFQQAQASMSSALSRLLVVNEKY PDLKSDQLYTNLMVQLEGTENRIAVARHRYVQAVQTYNTRIRTFPNNLTASWKGYKPKLT FQPENIESISTAPKIDFSTPSTAK >gi|316918029|gb|ADCU01000020.1| GENE 91 91453 - 92421 337 322 aa, chain + ## HITS:1 COG:ECs3635 KEGG:ns NR:ns ## COG: ECs3635 COG1512 # Protein_GI_number: 15832889 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Escherichia coli O157:H7 # 9 160 5 156 224 162 52.0 6e-40 MRFFGYGMILLLSLMSGSLFAKEIPIPALTQRVTDLTDTITNSESAQLSDQIVNFENKTG HQLAVLVVKTTGEETIEQYATRVFEQWKLGDKKRDDGLLLLIAKQDHTLRLEVGYGLEGE MTDVDAANVLDRYIVPLFKKNQFAQGISSGIEQVTFKLTGVKTADRSAAEGVSAATTHNR TNTASDNTRRTISHMPSSPYGVYVWIVGILLLLKLNAKSSKVILPALWGGIGMGVGNVVY QFVCLLLKPTPFKLSSLEPMFSVFFGIFMFIVFLILPFLKGWSSVQPSRRKSGWESKRSS SSSSTFGGGGGSSGGGGASSRW >gi|316918029|gb|ADCU01000020.1| GENE 92 92767 - 93360 314 197 aa, chain + ## HITS:1 COG:STM1570 KEGG:ns NR:ns ## COG: STM1570 COG0243 # Protein_GI_number: 16764914 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 3 197 1 195 1015 374 89.0 1e-104 MAMDVSRRQFFRICAGGMAGTTAAVLGFTPSLALAESRNYKLLRAKETRNSCTYCSVGCG LLMYSLGDGAKNAKSTIFHIEGDPDHPVNRGALCPKGAGLLDYVHSENRLRYPEYRAPGS DKWQRISWDDAFERIAKLMKNDRDKNFETTNAEGVTVNRWLSTGMLCASAASNETGMLTQ KFARSLGMLAVDNQARV >gi|316918029|gb|ADCU01000020.1| GENE 93 93409 - 95820 2094 803 aa, chain + ## HITS:1 COG:STM1570 KEGG:ns NR:ns ## COG: STM1570 COG0243 # Protein_GI_number: 16764914 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 802 213 1014 1015 1506 88.0 0 MTNHWVDIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIY APIRSGTDITFLSGVLLYLISNNKINAEYVKHYTNASLLVRDDFTFEDGLFSGYDESKRQ YDKTTWNYQFDENGYAKRDDTLQHPRCVWNLLKEHVSRYTPDVVENICGTPQADFLKVCE VLASTSAADRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSTSLPGYLTLPSEKQTTLETYLAANTPKATLPGQVNYWGNYPKFFVSLMKAF YGDAAQKENNWGFDWLPKWDQSYDVMKYFQMMDQGKVTGYICQGFNPVASFPDKNKVVES LSKLKYLVIIDPLVTETSNFWQNHGEMNAVDTASIQTEVFRLPSTCFAEEDGSIANSGRW LQWHWKGADAPGEARNDGEILAGLYHRLRTMYQNEGGAGAEPLLKMGWRYEQPDHPESEE VAKENNGYALADLYDANGTLLAKKGQLLDTFALLRDDGTTASACWIYAGSWTSKGNQMAN RDNSDPSGLGNTLGWAWAWPLNRRIIYNRASADPMGNPWDPKRMLIEWNGSKWVGNDIPD YNTAAPGSGVGPFIMQPEGLGRLFAIDKMAEGPFPEHYEPFETPLGTNPLHPNVISNPAA RLYESDAKRMGEKTEFPYVGTTYRLTEHFHTWTKHARLNAIVQPEQFVEISKGLAKAKGI THGDTVKVSSKRGFIKAKAVVTRRLSTLRVNGQDVETIGIPIHWGFEGVARKGFVANTLT PFVGDANSQTPEYKAFLVNVEKV >gi|316918029|gb|ADCU01000020.1| GENE 94 95833 - 96735 833 300 aa, chain + ## HITS:1 COG:STM1569 KEGG:ns NR:ns ## COG: STM1569 COG0437 # Protein_GI_number: 16764913 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Salmonella typhimurium LT2 # 1 300 1 294 294 553 86.0 1e-157 MSMQSQDIIKRSATNALTPPPQARDYKEEVAKLIDVSTCIGCKACQVACSEWNDIRDEVG HCVGVYDNPADLSAKSWTLMRFSEVEQNGKLEWLIRKDGCMHCTDPGCLKACPSAGAIIQ YANGIVDFQSEHCIGCGYCIAGCPFNIPRLNPDDNRVYKCTLCVDRVSVGQEPACVKTCP TGAIHFGSKKEMLEVASERVEKLKKRGFEQAGIYNPEGVGGTHVMYVLHHADKPELYHNL PKDPKIDMAVGLWKGVLKPLSVAGFIATFAGLIYHYIGIGPNKEVSDEEESDDEKGNHHE >gi|316918029|gb|ADCU01000020.1| GENE 95 96728 - 97387 699 219 aa, chain + ## HITS:1 COG:STM1568 KEGG:ns NR:ns ## COG: STM1568 COG2864 # Protein_GI_number: 16764912 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 215 1 215 218 367 84.0 1e-102 MSKSKMIVRTKFIDRACHWTVVICFFLVALSGIALFFPTLQWLTQTFGTPQMGRIMHPFF GVLIFVALMFMFFRFVKHNIPEREDVPWVVNIVEVLKGNEHEVADVGKYNAGQKMMFWSI MSLIFVLLVTGIIIWRPYFAQHFPIELVRYSLLIHAAVAIVLIHAILIHMYMAFWVKGSI KGMVEGKVSRRWARKHHPRWYREIEAKEAEKAKEDKPHD >gi|316918029|gb|ADCU01000020.1| GENE 96 97647 - 98567 483 306 aa, chain + ## HITS:1 COG:AGc453 KEGG:ns NR:ns ## COG: AGc453 COG4977 # Protein_GI_number: 15887614 # Func_class: K Transcription # Function: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 299 9 309 327 232 41.0 6e-61 MSVDVYFLVLPNMMVLDIVGPSETLQLAGDHFKIHYISPKQSVRCSTGMMVGDLKPLPET LPNGSLLVLPGVTNSLVDFDTEEALTALEWLKGWRGKVSRQELSIVCICSGALLAARAGL LDGIQCTTHHDILDRLRALAPAALVKENRIFIEDKGVCTCAGIMAGIDLALHLVHRFCSP QEAMRVAREMVVYFPRAGEDAQMSPWLRFRHHHHPVIHRAQDIIAISPEKNWNIEELAAL IHVSSRHLSRLFRQHLGISVREFHEQMRLAIAQQYIQSGMGVEKAALVAGFSSARQLRRA KMRAEE >gi|316918029|gb|ADCU01000020.1| GENE 97 98811 - 100088 1061 425 aa, chain + ## HITS:1 COG:YPO4021 KEGG:ns NR:ns ## COG: YPO4021 COG0439 # Protein_GI_number: 16124144 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Yersinia pestis # 17 419 5 408 414 195 31.0 1e-49 MESNISQSAVVSQQFAVIVDPFSSGALLAAEFKKRGLECIALISQKNIPAVFAGSYRRDD FFMEIRFDGNVKKISNVLRQLDIRAVVSCLETSVALADRVANLLDVPGNNVFTSERRRDK FAMGEAVRAAGLRAPLQKMSASEDEIIRWVAEHKVFPVVVKPVNSAGSDCVTICHDLDEV KFACSLILGKLNKFEQENTFVLVQEFLDGHEYVVDTVTLNGQTVTCNVFVYEKVAANNVA FVYRAIRALELDDPIAQKLIAYNDQVLKALDIHQGAGHSEIIISNGEPVLVEVGARMHGG NIPAVVQKCAKWSQIELLVDSYIDHPSFHRRAKEPLHLDRKILIHFYISGEGGKVKAIRG QSVVENLPSYFDAFWYVKPGESIAETVDLYTCPLKVILTHDNAQQIEEDKRLLLKLEQEN LIFEV >gi|316918029|gb|ADCU01000020.1| GENE 98 100122 - 100706 557 194 aa, chain + ## HITS:1 COG:MK0504 KEGG:ns NR:ns ## COG: MK0504 COG1335 # Protein_GI_number: 20093942 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Methanopyrus kandleri AV19 # 5 177 3 175 177 96 38.0 3e-20 MKKIAVLTNDLQYDLVEKNPERVAAVEAFKERFVSFMNNMREMGHIIVHLQLVNLPDDPN VERYNGFLPVQKGTHGAEIISEFLHPADIVVEKNKDSGFYETELDNILKQNDVDTVIITG MQTQICVQTTAADAFFRGYNVWVPTDGVVSARDEDKERALTWLAGYCATVCSSDEILHTL VDKGHLPRKEVKIP >gi|316918029|gb|ADCU01000020.1| GENE 99 100728 - 101741 861 337 aa, chain + ## HITS:1 COG:aq_1019 KEGG:ns NR:ns ## COG: aq_1019 COG0309 # Protein_GI_number: 15606316 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Aquifex aeolicus # 6 337 3 332 332 261 41.0 1e-69 MNQQDKIVLDHGTGAKLSQDLIRTMTELLGDVHIGKMEDSAVLNIGNNRIAMTTDSFVVS PVFFGNGDIGKIAVCGTVNDLAVMGAKPLFITLAMIIEEGFLIEDLKRIIMSIRDTAREA GVKIVAGDTKVVGRGEADKIFLNTTGIGTFEREPLSMLNVRSGDKIILSGNIGDHSIHLL SIREGLGFEQRVKSDCAPLNNIIEALLSSSLASAVVSMRDVTRGGFSEVMHEYSQSTGHV VCCDEARLPIQAETRMAADMLGVNPIHLANEGCLCLFVRSEHADEVVNFLREFEQSKNAT VVGEVSVEAGCQVLMRQSDGDSYTLEQLVGAELPRLC >gi|316918029|gb|ADCU01000020.1| GENE 100 101973 - 104291 1443 772 aa, chain + ## HITS:1 COG:CAC0810 KEGG:ns NR:ns ## COG: CAC0810 COG0068 # Protein_GI_number: 15894097 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Clostridium acetobutylicum # 1 767 1 752 762 636 41.0 0 MYTHKQIRVNGVVQGVGFRPFVHKIALINDLLGWVLNDSQGVLIEVQGSVENYAKFKRQL LEDKPPMASIISCVETSFETNHETGAIKYTSFLIKESLEKLNTTTIVPPDANVCPDCIRE MFDRTNRRYLYPFINCTNCGPRFSLIEDMPYDRKNTTMASFTMCDSCLAEYQDVADRRYH AQPNACPDCGPRAWLADTAGQEILHPEPLAQARRMLRDGQILAVKSLGGFHLSVDATQEN AIKLLRQRKRRDDKPFAIMVKDMATVRRFCEVSSEEERYLQSHQRPIVILKKRSDCSLPD AIAPANPSLGVMLPSAPLHYLLLDDTALPALVMTSANRSGNPIVFRNEEAVAELGQIADV FLFHNRDIHTRVDDSLVRLVSTRDGETLTTFVRRSRGYAPYPVNVAQTLRPIMAVGAELK TTLALSKGEQVYLSQHIGDLKNDKAFDAHELCGKTLGHLLDIQPTAWAADMHPQFRSTRH LEESSDLPLYRVQHHHAHMASCMAENGLQGKTIGVVFDGTGYGDDGTIWGGEFLLGDYKS AHRIASLHPFGLPGGDKAVKEPYRVALSLLFETFGDDARHLPLPFLSELQADQINVLMTM LSRGINTVKTSSMGRLFDGVSALIGVRSKIEYEAQAAIELEGLLDRDLSSAEIFAYSFVG DQGVIRLDYRPMIAEIVGCLINGSQDAAHLSRRFHATIVAATHRLCQLLSEAYNTSQFVL SGGVFMNEYLLANTYTALKNSGFRPFVQQQVPANDGGIALGQLMVANAQMES >gi|316918029|gb|ADCU01000020.1| GENE 101 104296 - 105624 848 442 aa, chain + ## HITS:1 COG:all0396 KEGG:ns NR:ns ## COG: all0396 COG0160 # Protein_GI_number: 17227892 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Nostoc sp. PCC 7120 # 2 438 42 478 493 445 50.0 1e-125 MAPFDHDLSRQFGIESNARTYSRTINCNIVRGQGSLLFDEHGHRYIDCLAGAGTLATGHN HPEIVSCLTSFLTSGQILHGLDMVTPAKRIFSEKVIVAFPEQWRNDLKIQFCGPTGADAA EAAIKLFKTATGRSNIIAFHGAYHGMTCGALSITGNLKVKDPIQNLMPGVHFLPYPYLFR SPYGVGDEETIDISLHHIRQTLVDPESGISKPAAMIVEAIQGEGGCIPAPLRWLKGLREI CTELDIPLILDEVQSGIGRSGAMFAFELADIQPDAVLLSKAIGGGLPMSLLVYHQKYDRW APGAHTGTFRGNQLAMIAGTATLEIIEREQILEQTKLKGAVLMHMLEGLKARHASIGDVR GTGLMVGIELVDVGGECDKFGRFPPNGDLATRVKRRCFEHGLIVETGGRHGAVVRLLPAL TIETALLEEAVCILDQALGDER >gi|316918029|gb|ADCU01000020.1| GENE 102 105719 - 106678 795 319 aa, chain + ## HITS:1 COG:no KEGG:Ccel_0416 NR:ns ## KEGG: Ccel_0416 # Name: not_defined # Def: protein of unknown function DUF6 transmembrane # Organism: C.cellulolyticum # Pathway: not_defined # 13 307 8 301 726 146 28.0 1e-33 MGNVDSQKGSRFGVGYILVFNLLSGIQAVYLSGLLQKANLFATITITFFFVSVFFLVVSL FYKEKKKIPTAPAAKFYNVLAINLTTAGSWLGFFVALKYIEPAVVSALANAIGPMLTLFI TVKIAKSDKLSRAEIFSAIGVFVCMLLMIRSTMNGTSALGNISRDHAIIGIGMAFLCGLS MVLNTIFSKRLNNQGVKPHSIMTFRFVLIVLVGVYIAGYDEIMATLHQYWLTLLIVAMLG NVLPLYILQVGISKVPPLVVSFALVLAPLFYFLSQQFSARIAFSAETLIFILCSLMFLSY GIIAKSKAKAMAEKALLAE >gi|316918029|gb|ADCU01000020.1| GENE 103 106759 - 107511 832 250 aa, chain - ## HITS:1 COG:ECs0992 KEGG:ns NR:ns ## COG: ECs0992 COG0501 # Protein_GI_number: 15830246 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 4 250 13 262 262 313 68.0 2e-85 MKLKTIIAIAVTTALLAGCKNINTQMMAQSGAQAVQAATLSDDDAKAIANKSCKEMDSQS QIASSKSKYTKRLNKIAKAMGNNINGTPVNYKVYMTEDVNAWAMANGCIRVYSGLMDMMT DEEVEGVLGHEMGHVALGHSLKAMKVAYGTIAARTAVASTSGVAAELSQTQLADLGEALI NSQFSQHQESEADDFSYDYLKKRKLNTLGLATSFEKLAQLEGGRKGSMFDSHPPSTERAQ HIRERIAADK >gi|316918029|gb|ADCU01000020.1| GENE 104 107701 - 108456 769 251 aa, chain - ## HITS:1 COG:YPO0927 KEGG:ns NR:ns ## COG: YPO0927 COG0501 # Protein_GI_number: 16121232 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Yersinia pestis # 3 251 2 250 250 355 79.0 4e-98 MNKITLPLIALTASAFLSGCQNMNAEGLMQSGAQAFQAATLSDAQVKALSEQSCAEMDSK NQIAPADSTYAKRLATISKALGSDINGTPVNYKVYVTKDVNAWAMANGCVRVYSGLMDMM NDNEVEGVLGHEMGHVALGHSRKAMQVAYATTAARTAIAASSGIGAQLSQSQLADLGEKL VNSQFSQKQESEADDYSFDLLKKRGINPIGLATSFDKLASQEAGRQSSMFDDHPSSQARA QHIRDRIAAEQ >gi|316918029|gb|ADCU01000020.1| GENE 105 108708 - 110702 1934 664 aa, chain + ## HITS:1 COG:YPO0926 KEGG:ns NR:ns ## COG: YPO0926 COG0021 # Protein_GI_number: 16121231 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Yersinia pestis # 1 664 1 664 664 1212 88.0 0 MSSRKELANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWRDYMNHNPTNPNWADRDRF VLSNGHGSMLIYSLLHLTGYDLPITELENFRQLHSKTPGHPEYGYTPGVETTTGPLGQGI ANAVGMAIAERTLAAQFNRPGHEIVNHHTYAFLGDGCMMEGISHEVCSLAGTLKLGKLTA FYDDNGISIDGHVEGWFTDNTAERFEAYGWHVIRGVDGHNSDAIKAAIEDARKVTDKPSL LMCKTTIGFGSPNKAGSHEAHGAPLGAAEIEATRKALGWNYAPFEIPQEIYSQWDAKEAG KAKESAWDQKFAAYKAAFPELAAEFKRRVSGELPANWAEESKKFIDHLQANPAKIASRKA SQNALEAFGKVLPEFLGGSADLAPSNLTMWSGSKPLNEDLAGNYIHYGVREFGMSAIMNG IALHGGFLPYGATFLMFMEYARNAVRMAALMKIRNIFVYTHDSIGLGEDGPTHQPVEQMA SLRVTPNMNTWRPCDQVESAVAWQFAIQRNDGPSALIFSRQNLAQMDRTPEQVANISRGG YILKDCAGQPELIFIATGSEVELAMNAAEQLTAEGRKVRVVSMPATEVFDKQDAAYRESV LPAAVTARVAVEAGIADFWYKYVGLNGAVVGMTTFGESAPAELLFKEFGFTVDNVVAKAK ALLK >gi|316918029|gb|ADCU01000020.1| GENE 106 111025 - 112068 459 347 aa, chain + ## HITS:1 COG:YPO0922 KEGG:ns NR:ns ## COG: YPO0922 COG0057 # Protein_GI_number: 16121227 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Yersinia pestis # 1 336 1 336 338 594 86.0 1e-169 MTIRIAINGFGRIGRSVLRALYESGRRVEMSVVAINELADAEGMAHLLKYDTSHGRFAWD VRQERDTMWVGGDIIRLLHEKQIANLPWSELGVDIVLDCSGVYGSRADGEAHIAAGAKKV LFSHPGSHDLDATVVYGVNQQELQPEHHIVSNASCTTNCIIPVIKLLDDAFGIESGTVTT IHSSMNDQPVIDAYHSDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTI NVTAIDLSVSVQAAVKVSDVNHLLQKAASTSFRGIVDYTELPLVSTDFNHDPHSAIVDGT QTRVSGQHLIKTLVWCDNEWGFANRMLDTTLAMFQAVSSTAQRPVLL >gi|316918029|gb|ADCU01000020.1| GENE 107 112109 - 113272 1296 387 aa, chain + ## HITS:1 COG:YPO0921 KEGG:ns NR:ns ## COG: YPO0921 COG0126 # Protein_GI_number: 16121226 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Yersinia pestis # 1 387 1 387 387 680 93.0 0 MSVIKMTDLDLAGKRVLIRSDLNVPVKEGKVTSDARIRASLPTIEAALKQGARVMVTSHL GRPTEGEYNEEYSLLPVVNYLKDHLKSPVRLAKDYLDGVDVAEGELVVLENVRFNKGEKK DDETLSKKYAALCDVYVMDAFGTAHRAQASTHGVGKFAPIACAGPLLSAELEALGKALGN PARPMVAIVGGSKVSTKLTVLDSLSKIADKLIVGGGIANTFVAAQGHNVGKSLYEADLVG EAKKLLTTCDIPVPTDVRVATEFSETAAATLKSVNDIKDDEQILDLGDASAHELAEILKN AKTILWNGPVGVFEFPNFRKGTEIVAQAIADSEAFSIAGGGDTLAAIDLFGIADKISYIS TGGGAFLEFVEGKKLPAVVMLEERAKQ >gi|316918029|gb|ADCU01000020.1| GENE 108 113414 - 114493 1092 359 aa, chain + ## HITS:1 COG:YPO0920 KEGG:ns NR:ns ## COG: YPO0920 COG0191 # Protein_GI_number: 16121225 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Yersinia pestis # 1 359 1 359 359 703 94.0 0 MSKIFDFVKPGVITGDDVQKVFQIAKENNFALPAVNCVGTDSINAVMEAAAKVRAPVIVQ FSNGGAAFIAGKGVKTDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWL DGLLDAGEKHFAATGKPLFSSHMIDLSEESLEENIEICSKYLTRMSKIGMTLEIELGCTG GEEDGVDNSHMDSSALYTQPEDVDYAYTKLNAISPRFTIAASFGNVHGVYKPGNVQLTPK ILHNSQEYVSKKHNLPHNSLNFVFHGGSGSTAAEIKEAVSYGVVKMNIDTDTQWATWEGI LNYYKKNEGYLQGQLGNPEGADKPNKKYYDPRVWLRAAQTSMIARLELAFDELNCKDVL >gi|316918029|gb|ADCU01000020.1| GENE 109 114881 - 115747 1000 288 aa, chain + ## HITS:1 COG:YPO0919 KEGG:ns NR:ns ## COG: YPO0919 COG0668 # Protein_GI_number: 16121224 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Yersinia pestis # 1 286 1 286 289 405 75.0 1e-113 MKDLNVVDGINNAGNWLVKNQDLLIHYAVNIIAAIVIFIVGSIIAKIVSGTITRLMKARG VDLTVAHFLSALVRYGIMAFTIIAALGRLGVQTASVIAVIGAAGLAVGLALQGSLSNFAA GVLLVLFRPFRTGEFVDLGGVSGTVKDVQIFSTTMLTADNKTIVVPNGKIIAGNIINYSR EPNRRVDITVGVAYDADIDIVKKVLGDIVAADSRIMHDQGVTIRLNEMAASSLNFVVRAW TTNANYWPVYFDLMENFKRGLDANKIGIPFPQMDVHLYQAAVRKAEGE >gi|316918029|gb|ADCU01000020.1| GENE 110 116287 - 116904 563 205 aa, chain + ## HITS:1 COG:ECs3794 KEGG:ns NR:ns ## COG: ECs3794 COG1279 # Protein_GI_number: 15833048 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Escherichia coli O157:H7 # 1 203 1 203 211 257 71.0 8e-69 MFSVFLQGFALSAAMILPLGPQNTFVLSQGIRRQYHLMIACLCALSDIVLICGGIFGGSA LLSQSPLLLMLVTWGGVAFLLWYGWGAFRAALAKQGIQTGTEVMQQSRWRIVVTMLAVTW LNPHVYLDTFVVLGSLGGQLAVDARSWFAFGAVSASALWFFSLALLAAWLAPWLSTPKAQ RVINLLVACVMWVIALQLARSGLQL >gi|316918029|gb|ADCU01000020.1| GENE 111 117074 - 117793 732 239 aa, chain + ## HITS:1 COG:YPO0917 KEGG:ns NR:ns ## COG: YPO0917 COG2968 # Protein_GI_number: 16121222 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 237 1 239 259 299 69.0 3e-81 MKLKALAMVAMMGLSALPTLSQAADIPEGPHLATSGTSSVSATPDIATLTFQVTASAKDA ASAKTQVDERVAKYFDFLKTNGIEKKDISAANLSTQPEYDYLKDGKSVLKGYRADRSVQV TLRQLDKLNGLLDGALKANLNEIRSVELGVAKPDNYREQARQEAIKNAVNQAQSLAKGFG VTLGPVYSIRYHVSNYQPAPVSRMYMAADSMPKTSAAQTYEQQTIQFDDQVDVVFSLNK >gi|316918029|gb|ADCU01000020.1| GENE 112 117858 - 118751 795 297 aa, chain - ## HITS:1 COG:YPO0916 KEGG:ns NR:ns ## COG: YPO0916 COG0583 # Protein_GI_number: 16121221 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 297 1 297 302 528 90.0 1e-150 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPRPT EQGQRLLALLHQVELLEEEWLGNDSSTDGPLLLSLAVNADSLATWLLPALKPVLADSPLR LNLQVEDETRTQERLRRGEVVGAVSIQPQPLPSCLVDRLGALDYLFVASPTFAARYFPNG VNRSSLLKAPAVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLALQGTTCCMI PHLQIEKELKDGSLINLTPGMVQRRMLYWHRFAPESRMMRRVTDALLTYGHHVLRQD >gi|316918029|gb|ADCU01000020.1| GENE 113 118960 - 119619 737 219 aa, chain + ## HITS:1 COG:ECs3785 KEGG:ns NR:ns ## COG: ECs3785 COG0120 # Protein_GI_number: 15833039 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Escherichia coli O157:H7 # 1 218 1 218 219 352 87.0 3e-97 MTQDELKKAVGWEALKYVKPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVSSSDASTEKL KSLGITVFDLNDVDSLDIYVDGADEINGHMQMIKGGGAALTREKVVAAVAKKFICIVDAS KQVDILGKFPLPVEVIPMARSYVARELVKLGGQPEYRQGVLTDNGNVILDVHNLKIMDAI ALEKQINAIAGVVTVGLFANRGADVALVGSADGVKTIVL >gi|316918029|gb|ADCU01000020.1| GENE 114 120051 - 121289 1061 412 aa, chain + ## HITS:1 COG:YPO0914 KEGG:ns NR:ns ## COG: YPO0914 COG0111 # Protein_GI_number: 16121219 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Yersinia pestis # 1 412 1 413 413 714 85.0 0 MAKVSLEKDRIKFLLVEGVHQSTVDNLRAAGYTNIEYHKGALDSESLKSSIRDAHFVGIR SRTHLTEDIFAAAEKLIAVGCFCIGTNQVDLVAAAKRGIPVFNAPFSNTRSVAEMVLGEL LLLLRGIPTANACAHRGEWNKQAVGCFEARGKKLGIIGYGHIGTQLGILAEGIGMNVFFY DIENKLPLGNAQQVRHLSDLLNMSDVVSLHVPETRSTKDMIGADELALMKPGSILINASR GTVVDIPALCNALSSKHLSGAAIDVFPTEPATNSDPFNSPLCEFDNVLLTPHIGGSTQEA QENIGAEVAGKLAKYSDNGSSLSAVNFPEVSLPMHEENVSRLLHIHENRPGVLTQINQIF AEEGVNIAAQYLQTNAQIGYVVIDIETETERAEAALQRMKEIAGTIRARLLY >gi|316918029|gb|ADCU01000020.1| GENE 115 121445 - 121948 221 167 aa, chain - ## HITS:1 COG:YPO0913 KEGG:ns NR:ns ## COG: YPO0913 COG0212 # Protein_GI_number: 16121218 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Yersinia pestis # 4 162 45 198 198 218 69.0 4e-57 MSLPQIQHAQTLSLFLSFDGELNTRPLIEQLWQAGKSVYLPVLHPFSRGNLLFLRYAPDT EMTRNYFGIDEPRLDVRQVLPLHRLHIVFTPLVAFDELGQRLGMGGGFYDRTLQEWQTAH AKHCGPYPIGLAHDCQKVDTLPSQEWDVPLPEIITPTMHYRWSSLMI >gi|316918029|gb|ADCU01000020.1| GENE 116 122409 - 122738 342 109 aa, chain - ## HITS:1 COG:YPO0912 KEGG:ns NR:ns ## COG: YPO0912 COG3027 # Protein_GI_number: 16121217 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 109 1 109 109 153 92.0 6e-38 MSAQPVDIQIFGRSLRVNCPPEQQEALNQAAEDLNQRLQDLKVRTRVTNTEQLVFIAALN VCHELAQERLKTRDYASNMEQRIRMLQQTIEQALLEQGRITDRQGAQFE >gi|316918029|gb|ADCU01000020.1| GENE 117 122928 - 123506 563 192 aa, chain + ## HITS:1 COG:YPO0911 KEGG:ns NR:ns ## COG: YPO0911 COG3079 # Protein_GI_number: 16121216 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 192 1 192 192 266 69.0 2e-71 MSIEITVPEYSVFTQALQQQGVGLTPAEMHGLISGILCGGNQNDNWRTMVHDLTNEGEAF SQSLAQPLQAAYQHTRDTLEDDGFGFQLLLPDGDDVTVFDRADALSGWVNHFLLGLGMMQ KNLGKIKGEVGEVIDDLRSIAQLGYEEDEDQEELEQSLEEVAEYVRMAAMLCHSEFSQEK PNAAEVQKPTLH >gi|316918029|gb|ADCU01000020.1| GENE 118 123826 - 125148 1245 440 aa, chain + ## HITS:1 COG:YPO0910 KEGG:ns NR:ns ## COG: YPO0910 COG0006 # Protein_GI_number: 16121215 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Yersinia pestis # 1 434 1 434 437 746 80.0 0 MTPQEFQRRRQAVLAQMAPGSAALFFAAPECTRSADSEYPYRQNSDFWYLTGFNEPEALL ILIKSDETHNHSVLFNRVRDLTAEIWFGRRLGQEAAPAKLGIDRALPYGDIEEQLHLLLN GLDVVYHAQGQYDFADQITFAALEKLRRGVRQNFRAPATLIDWRPWVHEMRLFKSQEEIA AMRRAGEITALGHIRAMEKCRPGMFEYQLEGEILHEFTRNGARYPSYNTIVGGGENGCIL HYTENECELKDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTKPQREIYDLVLASMDKAFE IFAPGRSIREANEATVRVMVEGLVKLGVMKGDVDQLIADQAHRQFFMHGLSHWLGLDVHD VGDYGSSARERVLEPGMVLTCEPGLYIAPDADVPVEYRGIGIRIEDDILITEDGFEVLTK DVVKQADDIEALMAQAKAAR >gi|316918029|gb|ADCU01000020.1| GENE 119 125164 - 126342 991 392 aa, chain + ## HITS:1 COG:YPO0909 KEGG:ns NR:ns ## COG: YPO0909 COG0654 # Protein_GI_number: 16121214 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Yersinia pestis # 1 392 1 392 392 523 69.0 1e-148 MKMIIVGGGMAGATLALAVSALSAGRIQVEVVEAVSPDSRQHPGFDARAIALAYGTCQQL ERIGVWQALKACATPIERVHVSDQGHAGFVGLDALDYQIPYLGQVVELHQAGSRLFQLLE KAPGVTLHCPAKVVGVERQKDSARIALDNGSHLTGELLVAADGSSSALAQHCNVDWRSED YGQIAVIANVTTALPHQGKAFERFTRNGPLAMLPMSEGRCSLVWCHSANEQDNVDSWSDS EFLCQLQKAFGWRLGAMIKAGKRHSYPLRLTLAQQHISHRLALVGNAAQTLHPIAGQGFN LGLRDVISLAETVVQAEQQGHDIGSYQVLSQYQRRREPDQRATIGVTDGLIHLFANRLAP LVAGRNLGLMAMELVPSLRETLARRTLGWVER >gi|316918029|gb|ADCU01000020.1| GENE 120 126429 - 127634 1031 401 aa, chain + ## HITS:1 COG:ECs3777 KEGG:ns NR:ns ## COG: ECs3777 COG0654 # Protein_GI_number: 15833031 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 597 73.0 1e-170 MQSFDVVIAGGGMVGLATAAALQGSGLRIAVVEHRIPELAELAPEPALRVSAINAASERL LQHLGVWQDILALRASAYQGMEVWDSDSFGRIAFRAQEYGHTHLGHIIENSVIQQALWNK VARQSEVTMIAPATFQQVAWGENEAFITLNDGQMLTARLVIGADGAQSWLRQHADIPLTF WDYGHHALVATIKTEQPHDGCARQVFRPNGILAFLPLEDEHLCSIVWSVGPEEARRLEAL SDSDFNRELAVAFDTRLGLCEVVSPRQSHPLVGRYARSFAAHRLALVGDAAHTIHPLAGQ GVNLGFMDAAELASEIKRLQRQGKDIGRYMYLRRYERSRKHSAAVMLTAMQGFRQLFDGD NPAKKLLRDVGMMLADNLPGLKPRLVQHAMGLADLPDWLQK >gi|316918029|gb|ADCU01000020.1| GENE 121 128116 - 129213 1170 365 aa, chain + ## HITS:1 COG:STM3055 KEGG:ns NR:ns ## COG: STM3055 COG0404 # Protein_GI_number: 16766356 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Salmonella typhimurium LT2 # 1 363 1 363 364 634 82.0 0 MAKQTPLFDQHVACGARMVDFHGWMMPLHYGSQIDEHHAVRQDAGMFDVSHMTIVDLRGP RTREFLRYLLANDVAKLTVPGKALYTGMLNASAGVIDDLIVYFLEEEYFRLVVNSATREK DLAWITEHAEPYHVDITVRDDLALIAVQGPQAQERAATLFSDAQKQAISGMKPFFGAQAG DYFIATTGYTGENGYEIALPVGEAPEFWQKLVKAGVKPCGLGARDTLRLEAGMNLYGQEM DEGVSPLAANMGWTIAWSPEDRDFIGREALEQQRENGTEQLVGLVMTEKGVLRNELPVRF TDTNGNLQEGVITSGSFSPTLGVSIALARVPAGIGDEAIVQIRNREMPVRVVKPGFVRNG KSLIN >gi|316918029|gb|ADCU01000020.1| GENE 122 129372 - 129758 589 128 aa, chain + ## HITS:1 COG:YPO0906 KEGG:ns NR:ns ## COG: YPO0906 COG0509 # Protein_GI_number: 16121211 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Yersinia pestis # 1 128 1 128 128 181 78.0 3e-46 MSNVPTELKYTASHEWVRAEGEGVYSVGITEHAQELLGDMVFIDLPEVGTSFDAGDDCAV AESVKAASDIYAPISGEIVSINDELEGAPELVNSAPYSEGWLFRIKASDESQIADLLDAA AYESSIED >gi|316918029|gb|ADCU01000020.1| GENE 123 129907 - 132789 2993 960 aa, chain + ## HITS:1 COG:YPO0905_2 KEGG:ns NR:ns ## COG: YPO0905_2 COG1003 # Protein_GI_number: 16121210 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Yersinia pestis # 468 960 2 494 494 933 92.0 0 MTQTLSQLENSESFIARHIGPSAQQQQEMLETVGARSLRDLIEQIVPSDIQLPTPPAVGD AVTEHQALAELKAIAGQNQRYKSFIGMGYHGVLMPPVIQRNMLENPGWYTAYTPYQPEVS QGRLEALLNFQQLTQDLTGLELASASLLDEATAAAEAMALAKRASKLKNANRFFVAADVH PQTLDVVRTRAETFGFDVIVDDAEKVLDHQDVFGVLLQQVGTYGELHDYTALMNELKNRK VITCVAADPMALVLLAAPGKLGADVVFGSAQRFGVPMGYGGPHAAFFGCRDEFKRSMPGR IIGVSRDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVYHGPVGLKRI ADRIHRLTDILAAGLKQKDVTIRNHSWFDTLTVVVKDKAEVLARALSFGFNLRSDIPGAV GISLDEATSREDVEALFAVLLGDNHGLDIDTLDTLVSEECEGSIPSHMLRTDPILTHPVF NRYHSETEMMRYMHRLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPP EQALGYQIMISQLSQWLVQLTGYDAVCMQPNSGAQGEYAGLLAIRRYHESRNEATRHVCL IPSSAHGTNPASAQMAGMSVVVVACDDSGNIDLHDLRAKAEQAGDELSCIMVTYPSTHGV YEETIREVCQIVHQFGGQVYLDGANMNAQVGITTPGYIGADVSHLNLHKTFCIPHGGGGP GMGPIGVKSHLAPFVPGHTIVQIDGLTTQQGAVSAAPFGSASILPISWMYIRMMGAEGLK KASQTAILNANYIATRLKSAYPILYTGRDGRVAHECILDIRPLKEQTGISEMDIAKRLID FGFHAPTMSFPVAGTLMVEPTESESKAELDRFIDAMLAIRAEIERVSSGEWTLADNPLVN APHIQAELVANWEHAYSRELAVFPTESTRENKYWPTVKRLDDVYGDRNLFCSCVPISEYE >gi|316918029|gb|ADCU01000020.1| GENE 124 132885 - 133757 345 290 aa, chain - ## HITS:1 COG:STM3121 KEGG:ns NR:ns ## COG: STM3121 COG0583 # Protein_GI_number: 16766421 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 279 1 279 292 236 44.0 4e-62 MELRHLRYFVAVAQTGHFTRAAEQLGISQPPLSQQIQKLEHEVGTPLIKRLTRGIELTET GKTLYKDACEIIKLTDAALERARNVARGISGSVNIGFACSTAFNPTVFSLLRRFRENYPK MHLQPQEKDMSALMNALEEGNLDFAFIRLPCERSKDFMCRVIDTEKMMVALPRTHPLSQN KSLSLLDLKDEPLITFPREVAPSLYDQTINACEEAGFTPLLGQQSPQLTSAISMVGGGFG FALVPASLSKIDEKNVVCLESRRALPTSDIAIAWRRGDSGHVILHLLNLL >gi|316918029|gb|ADCU01000020.1| GENE 125 133861 - 134643 612 260 aa, chain + ## HITS:1 COG:VC1589 KEGG:ns NR:ns ## COG: VC1589 COG3527 # Protein_GI_number: 15641597 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alpha-acetolactate decarboxylase # Organism: Vibrio cholerae # 8 259 9 260 261 294 54.0 1e-79 MKAHHSDCSCVADIAETAKQLYRKHPERVIYQTSLMSALLSGVYEGETTMADLLKHGDFG LGTFNHLDGEMIAFNRNIFQLRGDGSARKAKPEQKTPFAVMTFYQPTEEYRINRLHSRDE IHQVIDKMLTSQNAFCALRIDGVFHNVETRTVPEQHRPYKPMQEAIEAQPTYHIEQRKGV LIGFLTPNYMQGINVAGYHEHFITEERDCGGHVLDYQVESGVLTFGTIDKLLIDFPHDDD FMQADLCPANLDTAIRSVES >gi|316918029|gb|ADCU01000020.1| GENE 126 134673 - 136349 1314 558 aa, chain + ## HITS:1 COG:VC1590 KEGG:ns NR:ns ## COG: VC1590 COG0028 # Protein_GI_number: 15641598 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Vibrio cholerae # 6 549 3 547 567 660 59.0 0 MKKSDSNKAWQCGADLIVAQLEAQGVKHVFGIPGAKIDRVFNSLVDSNIETIPVRHEANA AFMAGAVGRLTGKAGVALVTSGPGCSNLITGVATATSEGDPLVALGGAVKRADHLKQVHQ TMDTVTMFRPVTKYSAEVTSASALPEVLANGFRAAEFGRPGASFISLPMDILNEPVNSRV LTTQHPTLGAAPFESVAQVARRLEKAKNPVILLGLMASQPRNAEAIRRFLHKSGLPVTST YQAAGVIDQAHFHRFAGRVGLFNNQAGDRLLRNADLVMTIGYSPIEYEPAQWNNDESALV HVDIMPAETDSDYQPDIELVGDIADTLDLLSEHIHATLDLSRDAVAILEERRQQRELLAQ KGRSLTQFAIHPLRLVRAMQDIVNSDVTLCVDMGSFHIWIARYLYSFRARQVLISNGQQT MGVALPWAIGAALVDPSRKVVSVSGDGGFMQSSMELETAVRLGVNLLHIIWVDDEYNMVA IQEDKKYHRTSGVKFGPIDFKVYAEAFGAKGFAVTSSETLESTLRAAMDVQGPAVVAVPV DYSDNALLMSQLNMSEMF >gi|316918029|gb|ADCU01000020.1| GENE 127 136483 - 136617 85 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MISVSNRMLNQHNKMIKLDLFKVTQEIAHWISATFALENFIQNK >gi|316918029|gb|ADCU01000020.1| GENE 128 136875 - 138275 913 466 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 4 464 3 447 456 356 41 7e-97 MEFITQLVNQVNSLLWDELLIFLLCGTGIYYTLRLGFIQIRHFKSGFKALFSGISLSGAK ADKQGMSSFQAVATAIAGQVGTGNLAGPATAIIAGGPGAIFWMWVSSFLGMATIYAEAML AQKFRSKDKNGQVVGGPAYYIEKGLNCKWLACIFSVLVIIALGFIGNMVQSNSIAAAFNS SLGVPGWVIGIILALITGVVIMGGISSIASFTEKVVPIKAVFYLLGTLVILVHNAHYILP AFKSIFVAAFNPTAVLGGGAGIAIQQAMRFGIARGLFSNEAGMGSTPHAHAVAKVERPEQ QGYIAMMGVFVVCVIVTLTALAIITSGMSMWELDGKTQANFLGVFTGQGIAVTQQAYTYV YGYFGSLFISVSLFFFAFSTIVGWYYYGEMNIRYLFNSQRAVRAYQLMVIAFIFIASFFK VELVWNMADMFNGLMVLPNLIALILLSPIVIKMSKLVGGKVAVNPD >gi|316918029|gb|ADCU01000020.1| GENE 129 138458 - 139108 644 216 aa, chain - ## HITS:1 COG:ECs3771 KEGG:ns NR:ns ## COG: ECs3771 COG1272 # Protein_GI_number: 15833025 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Escherichia coli O157:H7 # 1 216 1 216 219 286 77.0 2e-77 MAKANIVQQGYSLAEEVANSISHGVGFILGIVGLVLLLVQAVGTGADATAITSYSLYGGS MILLFLASTLYHAISHQRAKRWLKVFDHCAIYLLIAGTYTPFLLVGLDSTLAKWLMAVIW GIALFGIIFKLAFAHRFEVLSLITYLTMGWLSLIVIYQLATKLAWGGVTLLAIGGIVYTL GVIFYVSKRIPYNHAIWHAFVLGGCACHFFAIYLYV >gi|316918029|gb|ADCU01000020.1| GENE 130 139756 - 140640 805 294 aa, chain + ## HITS:1 COG:Ztsx KEGG:ns NR:ns ## COG: Ztsx COG3248 # Protein_GI_number: 15800140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Nucleoside-binding outer membrane protein # Organism: Escherichia coli O157:H7 EDL933 # 1 294 1 294 294 441 83.0 1e-123 MKKIILAAGTVLALSSSVTAVAADNNSEYLSDWWHQSVNVVGSAHTRFGPQLRDDTYLEY EAFAKKDWFDFYGYVDAPMFFGGDSTSRGIWNHGSPLFMEIEPRFSIDKLTGTDLSFGPF KEWYFANNYIYDMGRNSDNRQSTWYMGLGTDIDTGLPMSLSMNVYAKYQWQNYNASNENE WDGYRFKVKYFVPITEVLGGNLSYIGFTNFDWGSDLGKDSGYSNIDGKRTRTSNSIASSH ILALNYDHWHYSFVARYFHNGGQWNDGTELNFGKGNFDVKSTGWGYYLVAGYNF >gi|316918029|gb|ADCU01000020.1| GENE 131 140844 - 141668 840 274 aa, chain + ## HITS:1 COG:STM3859 KEGG:ns NR:ns ## COG: STM3859 COG0169 # Protein_GI_number: 16767143 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 271 1 271 272 416 76.0 1e-116 MTKYLNKDTQVCMSLAARPSNFGTRFHNYLYDALDLDYLYKAFTTKDIQAAIGGVRALGI RGCAISMPFKEDVIPLVDEMDASAKAIDSVNTIVNTDGHLKAYNTDYLAIAQLLAQYAVS NDQVFALRGSGGMAKAVACALKDAGFKRGSIVAKNEKTGQQLAALYGYEWRADMQGVTAE VLINATPIGMSGGADADKFAYSEDEINSANVVFDVVALPSETPMIRYAKTQGKTVISGAE VFAIQAVEQFVLYTGIRPDHELFLAAAKYARESA >gi|316918029|gb|ADCU01000020.1| GENE 132 142333 - 143319 874 328 aa, chain - ## HITS:1 COG:YPO0898 KEGG:ns NR:ns ## COG: YPO0898 COG0354 # Protein_GI_number: 16121204 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Yersinia pestis # 1 328 1 328 330 435 65.0 1e-122 MTLNSLFAPRQPVASSHLPLTIMLLNDWQLVNVTGPDAGKYLQGQLTVDVAALTEQEHTL CGHCDAKGKMWSDLRLFHRAEGFSYLLRRSVAENQIVELKKYAVFSKLTIAADTDAVVLG VAGFKAASALAPLFSQLPDSTTPVVAHEETTLLYLAQPEDRYLVITSTSMAEALVEKLQG SAQFNDSQQWVELDIEAGQPVIDVENSGQLIPQATNLQALNGICFKKGCYTGQEMVARAK YRGANKRALYWLQGSASRVPQAGEDLELKLGENWRRTGTVLTAIQLNDGILNVQAVLNND LEADSVLRVRDDEGGMLTIQALPYSLVE >gi|316918029|gb|ADCU01000020.1| GENE 133 143694 - 143960 267 88 aa, chain + ## HITS:1 COG:YPO0897 KEGG:ns NR:ns ## COG: YPO0897 COG2938 # Protein_GI_number: 16121203 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 88 1 88 88 151 80.0 2e-37 MDIENKSRIHWACRRGMRELDISIMPFFEHEYDSLSDTDKQTFVRLLECDDPDLFNWLMN HGSPKDPELAHMVKLIQTRNKDRGPMAL >gi|316918029|gb|ADCU01000020.1| GENE 134 143941 - 144354 160 137 aa, chain + ## HITS:1 COG:no KEGG:Spro_3897 NR:ns ## KEGG: Spro_3897 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 1 131 1 130 140 138 57.0 6e-32 MDQWRCDVRVSWRTQLLLLVTHGTLVLLILLAPWPENYSIYWLILLTLVVFESIRSQKQI AKVQGELNFLAENRISWQHQEWELCKTPWISDFGALLPLKSLKDQDKRKRLWIAADSLTP EAWSHLRRSLMQMRHDA >gi|316918029|gb|ADCU01000020.1| GENE 135 144403 - 144921 550 172 aa, chain - ## HITS:1 COG:ECs3767 KEGG:ns NR:ns ## COG: ECs3767 COG0716 # Protein_GI_number: 15833021 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 170 1 170 173 271 78.0 4e-73 MKIGLFYGSSTCYTEMAAEKIRDILGTELVDLHNIKDVPIQRMEDYDILILGIPTWDFGE IQEDWEAVWDALPSLKLQNKIIAMYGMGDQLGYGEWFLDALGMLHDRLLPLGVQFVGYWP TEGYEFTSPKPVIDDGKLFVGLALDEANQYDLSDQRLEKWCEQIMLEIAELL >gi|316918029|gb|ADCU01000020.1| GENE 136 145126 - 146025 586 299 aa, chain + ## HITS:1 COG:YPO0892 KEGG:ns NR:ns ## COG: YPO0892 COG4974 # Protein_GI_number: 16121197 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Yersinia pestis # 1 299 1 299 299 498 85.0 1e-141 MHEQDQALIEQFLDALWLERNLAENTLASYRLDLRSLAEWLAHHHSDLLLAQVSDLQDFL AERVDGGYKATSSARLLSAMRRLFQYFYREKMRSDDPTTLLSSPKLPQRLPKDLTEAQVD TLLQTPCIENPIELRDKAMLEVLYATGLRVSELVGLTLADVSLRQGVVRVIGKGNKERLV PLGEEAVYWIEYYLEYGRPWLLNGQTIDVLFPSNRTQQMTRQTFWHRIKHYAVLAGIDSS RLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA >gi|316918029|gb|ADCU01000020.1| GENE 137 146054 - 146770 771 238 aa, chain + ## HITS:1 COG:YPO0891 KEGG:ns NR:ns ## COG: YPO0891 COG1651 # Protein_GI_number: 16121196 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Yersinia pestis # 1 238 1 238 238 338 69.0 4e-93 MKKGLIWLSLLAASVTGAAHAGDAEIQQSLKTLGVQKADIQPSPVAGLQTVFTDNGVLYV TSDGKHILQGPMYDVSGAVPVNVTNQILIGRLQKLVPEMIVYKAPKEKHVITVFTDITCG YCHKLHSQMKEYNALGITVRYLAFPRQGLSSQAEKDMQSIWCMADRRKAFDAALSGESTQ PATCNVDIKKHYELGVQFGVQGTPAIVLNDGTVIPGYQGPKEMLAMLDAQAAMSKAKG >gi|316918029|gb|ADCU01000020.1| GENE 138 146776 - 148509 1463 577 aa, chain + ## HITS:1 COG:YPO0890 KEGG:ns NR:ns ## COG: YPO0890 COG0608 # Protein_GI_number: 16121195 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Yersinia pestis # 1 576 1 576 577 937 80.0 0 MIVSTQLRRREAVENHELPEDLHPLLRRVYANRGILNVQELERSVKGLLSYQKLSGIERA VELLHQALSEHQRIVIVGDFDADGATSTALSMLALRSMGAANVQYLVPNRFEDGYGLSPE VVEQAAAMGAELIMTVDNGISSHAGVDNAHDRGIKVLVTDHHLPGETLPAADAIVNPNLN DCDFPSKSLAGVGVAFYLMLALRKHLHEHGWFEKHGISAPNLADLLDLVALGTVADVVAL DTNNRILVHQGLNRIRAGKCRVGIRALLEISNRDARQLVASDLGFALGPRLNAAGRLDNM SVGVELLLCEDMPQARALASDLDSLNVTRREIEQGMQVEALQICSELERTTVEMPYGLAL YHPEWHQGVVGILASRIKERFYRPVIAFAPAGDGILKGSGRSIHGLHMRDALERIDSQNP GLIMKFGGHAMAAGLSLEEARFDEFRLRFAELVGEWLDASQLEGVIWSDGELAMDELSLP TAELLRDGGPWGQAFPDPTFDGKFKILQQRLVGERHLKLMVEPVGGGPLLDGIAFNVDTT LWPDPSVREVELAYKLDINEYRGNRSVQLMIQHLWPR >gi|316918029|gb|ADCU01000020.1| GENE 139 149168 - 150049 876 293 aa, chain + ## HITS:1 COG:YPO0889 KEGG:ns NR:ns ## COG: YPO0889 COG1186 # Protein_GI_number: 16121194 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Yersinia pestis # 1 293 74 366 366 518 90.0 1e-147 MTQGLDDVSGLLELAIEADDEETFNEAVVELDQLDAKLAQLEFRRMFSGEYDSADCYIDI QAGSGGTEAQDWASMLLRMFLRWAEAKGFKTEIIEESDGEVAGLKSATVKISGEYAYGWL RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ HVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYEYEMQKKNAEKQVMED NKSDIGWGSQIRSYVLDDSRIKDLRTGVETRNTQAVLDGDLDRFIEASLKAGL >gi|316918029|gb|ADCU01000020.1| GENE 140 150059 - 151576 1791 505 aa, chain + ## HITS:1 COG:YPO0888 KEGG:ns NR:ns ## COG: YPO0888 COG1190 # Protein_GI_number: 16121193 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Yersinia pestis # 1 505 1 505 505 878 83.0 0 MSEQQSQGAEQALDLNNEMQSRREKLAALRKEGIAFPNDFRRDATSDKLHSLYDEKDKAE LEDLNVEVSVAGRMMTRRIMGKAAFVTLQDMGGRIQLYVARDDLPEGLYNDQFKKWDLGD IIGARGKVFRTQTGELSIHCTEIRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEES RETFRIRSKTLAAIRSFMVNKGFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEDLFRT LTQEVLGSSIVQYGDQTFDFGKPFIKMTMKESINHYRPDIKMEDLDDLEKATKIAESLGI KIEKSWGLGRIQCEIFDETAEKNLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGG REIGNGFSELNDAEDQAERFQDQVRAKDEGDDEAMFYDEDYVTSLEHGLPPTAGLGIGID RMMMLFTNSHTIRDVILFPAMRPIK >gi|316918029|gb|ADCU01000020.1| GENE 141 152146 - 153324 404 392 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 10 388 14 402 406 160 28 7e-38 MKLTARQVETAKPKDKPYKLSDGGGLYLLVNPNSKRYWRLKYRSLGKEKLLAIGVYPDVS LAEARSKREDAKRTLAAGNDPSLERKIEKLSRQQDAENSFEAITREWYQRRYDRWSVSYR EEMLRTFEKDVFPYIGHRPIKDIKPMELLAVLSKIEARGATEKVRKVRQRCGEVWKYAVV TGRAEYNPASDLASAVAPHEKEHYAFLTQDELPEFLRTLNTYAGSVIVKIAMQLLILTGV RPGELRQAEWQEFDFERKVWNVPAERMKMRRPHLVPLSSQAIDLLNQLKPMTGAGALLFP GRNNPKKPMSDMALTVLVRRIGYAGRATGHGFRHTMSTILHEQGFNSAWIELQLAHVDKN SIRGTYNHVQYLEGRREMMQWYADFIASKNQS >gi|316918029|gb|ADCU01000020.1| GENE 142 154133 - 156160 438 675 aa, chain + ## HITS:1 COG:no KEGG:AHA_2063 NR:ns ## KEGG: AHA_2063 # Name: not_defined # Def: hypothetical protein # Organism: A.hydrophila # Pathway: not_defined # 1 667 142 809 821 882 63.0 0 MVTSAVFCLSATALQLFGFEPGLFIYAAGTLLTLISSLALFPLGQRLFNFFDLNQLARSE ILPRIARHIEGASNSKNSISLANHHSKAAHSAFEQLNYIDDRMGLEKVGLCDNLPAINDD YSALLLHYLNQKHKINHQSYWYPRRQKHKQWFFAGDSATTMALQTRSQLTADEEVNYDWL ESEIINRLIGHIELALNVGDFKLGLDLISRFSSRVYTYARQFHFDIGMSELRRMKVLIEE YFSSSDILDSNEAIVMRVGIADTWAALGSNLCLETLRRIITFEQELREFFQKDIWTERSL LSLPAFLQIDLAFIIERIEFEKEIEGQRLSKPRYVQQLVVQKLLQKYAKILPEICDFHAS LVPDFVSSMIKMKMPEAATQVILGSLHNHWKLPRWFEDISLLLDRYREFEHYPEKQYALP EINIADILGRLTSTQNEAVAFLGRSDIVRHILDQEQNEELPDHFGQIYFELAEACIQALE QNDENKLSKVFPMFMFLSLQASETKFVDPKLDVNDEFRLHLRSSVINDLMSVLGFAILYS AYFDNEKLSEAVLNSFRALIERIPDKQQYFKRMMILSNPYNFSFRASPRDMIRNKWKMTF EHRARHDGFSDQMGRSRGVHHKNKVVREFLSSHSDASHLFCALEILPQLNPIDFKIDYHV TSLARSLDVKYEGGL >gi|316918029|gb|ADCU01000020.1| GENE 143 156697 - 157152 127 151 aa, chain + ## HITS:1 COG:no KEGG:plu4461 NR:ns ## KEGG: plu4461 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 1 151 180 330 330 207 65.0 9e-53 MLSKQNRILAVLDKHQFDSTKFFAQVTHENPYPKKHFDFHIWKNIQERTLYSATRKTGWN ARNYDSNKRSDFFLCYQLIRFRRNQLVLRDYILLQLGKELTKAGRELNLDFYVSISPGSD LPQIDELDDLESKLSKEEISFTEVLDYCYER >gi|316918029|gb|ADCU01000020.1| GENE 144 157942 - 158193 315 83 aa, chain - ## HITS:1 COG:no KEGG:Dd586_2860 NR:ns ## KEGG: Dd586_2860 # Name: not_defined # Def: protein of unknown function DUF1471 # Organism: D.dadantii_Ech586 # Pathway: not_defined # 1 83 1 84 84 79 58.0 5e-14 MKSLLITSLVMGFISVNAASAAQEINHADGKEKIGVVSASNAYTLDELSNTLSRKADEQG ATSFKILSATGDNKLHGVAEIYK >gi|316918029|gb|ADCU01000020.1| GENE 145 158331 - 159107 527 258 aa, chain - ## HITS:1 COG:Cgl1024 KEGG:ns NR:ns ## COG: Cgl1024 COG0702 # Protein_GI_number: 19552274 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Corynebacterium glutamicum # 39 211 1 166 178 162 49.0 8e-40 MKILVAGATGSIGLHVVNTAIEMGHQPVALVRNKRKVKLLPRGTDVFYGDVSMPETLTEL PKDIDAIIFTLGSDGQGRIGARAIDYGGVRNILRIFKDTPVRIGLMTTIGVTERLSTWNQ HTEVHDWKRRSERLVRASGHPYTIVRPGWFDYNNDDEHRIVMLQGDRRHAGTPEDGVISR EQIAQVLVSALTNDEAKNKTFELVAERGEAQQDLTPLFADLQTDDPQKNDGVLDIDNMPL REEPECIINELNLYSKNN >gi|316918029|gb|ADCU01000020.1| GENE 146 159256 - 160149 451 297 aa, chain + ## HITS:1 COG:YPO2807 KEGG:ns NR:ns ## COG: YPO2807 COG0583 # Protein_GI_number: 16123005 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 297 1 297 297 516 85.0 1e-146 MLKENFNELQIFLVVARERSFTKAAGKLGVSQSALSHAMKALEERLNIRLLTRTTRSVAP TEAGERIIACLEPRIADLEQELESLVQLNGTASGNIRLSAGEHAARSLVWPKLKPFLREY PEINLELVVDNGFVDIVEGRFDAGIRLGESVDKDMIAVRIGPDMRMAVVGAPSYFAENPA PETPHELQNHRCINMRLPTAGGLYHWEFEKEGKPLRVRVEGQVTFNLQAERIDAALSGFG IACIPEDRVQDYIKSGELIQVLQDWCPSFPGYYLYYPSRKQHPPAFALMIDALRYSE >gi|316918029|gb|ADCU01000020.1| GENE 147 160184 - 161173 1007 329 aa, chain - ## HITS:1 COG:YPO2806 KEGG:ns NR:ns ## COG: YPO2806 COG0667 # Protein_GI_number: 16123004 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Yersinia pestis # 1 329 1 329 329 589 90.0 1e-168 MQKRILGKSGLEVSALGLGCMGLSHGYGPATNTRQAIELIRAAVERGVTFFDTAEVYGPF LNEEVVGEALKPFRDRVVIATKFGFTFGDDNKQQILNSRPEHIREAVEGSLRRLKTDVID LLYQHRVDPDVPIEDVAGTVKDLIAEGKVKHFGLSEAGAQTIRRAHAVQPVTALQSEYSL WWREPEQEILPLLEELGIGFVPFSPLGKGFLTGAIKPGTTFGKDDYRSTVPRFAEQAIEA NEKLVSLLGELAAGKGVTSAQIALAWLLAQKPWIVPIPGTTKLHRLEENLGAADIILSQD DSRQITQALETIKIVGERYSPEHQARVGR >gi|316918029|gb|ADCU01000020.1| GENE 148 161200 - 162051 706 283 aa, chain - ## HITS:1 COG:YPO2805 KEGG:ns NR:ns ## COG: YPO2805 COG0656 # Protein_GI_number: 16123003 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Yersinia pestis # 1 283 15 297 297 544 92.0 1e-155 MQTVKLNNGVEMPLLGFGVFQMSDAAECERAVIDAIDTGYRLIDTAASYQNETQVGNALK QSGIARDELFVTTKLWLQDTHYEGAKAQFERSLNRLQLDYVDLYLIHQPYGDVHGAWRAM EELQQAGKIRAIGVSNFHPDRLADLIAFNKVAPAVNQIEVNPFNQQLHAVPWNQSRGIQP EAWAPFAEGKNGLFQHPVLTAIGQKYGKSVGQIVLRWIFQRGIVSLAKSVRKERMEENIN ILDFELSSEDMLQITALDTATSAFFSHRDPAMVEWLTGRKLDV >gi|316918029|gb|ADCU01000020.1| GENE 149 162960 - 164024 854 354 aa, chain - ## HITS:1 COG:no KEGG:LF82_p248 NR:ns ## KEGG: LF82_p248 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_LF82 # Pathway: not_defined # 8 354 2 348 348 682 95.0 0 MKTILKTLAICVMAGGLVAQSVYADPLVIQEQGSFSAGGTIITTPGTFDAKKPLDSAGQT YHGDHASVFYQIPENPHKYPIVMLHGAGQFSRTWESTPDGREGFQNIFLRRGFSTYLVDQ PRRGSAGRTTVEGTVSPKPDEQMWFNQFRVGVWPEYFKGVQFSHDKEALNQYFRQMTPNT GPFDINVISDAMSAVVDKSGPAILFTHSQGGGPGWYTAMKNDKVKAIVAFEPGSGFVFPE KELPAPMPSAFDTLKGEPVPMEQFMALTKIPILIIYGDNIPDKPVAMPAQDSWRVRLAMA REWRDVVNKHGGDVTVTHLPEVGIKGNTHFPFSDLNNVQIADLVSKFLKEKNLQ >gi|316918029|gb|ADCU01000020.1| GENE 150 164132 - 164716 258 194 aa, chain - ## HITS:1 COG:MA0407 KEGG:ns NR:ns ## COG: MA0407 COG0716 # Protein_GI_number: 20089301 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Methanosarcina acetivorans str.C2A # 37 192 6 175 179 109 34.0 3e-24 MEHDPNRRMLITALAGLTLANASLATASTGKANVQGKSRVLVAYFSRSGNTRVIAGVIHR SLHTDLFEIEPATPYPEDYFQTVEQAKNERERGIKPALKNSVADISRYETVYLGFPIWGT SVPPVVQTFLSNHNLTGKLLIPFITHGGYGKGDSDDILASLAPTARREKPLVIECDQERR TTETVTHWLETIRS >gi|316918029|gb|ADCU01000020.1| GENE 151 164726 - 165487 660 253 aa, chain - ## HITS:1 COG:XF1766 KEGG:ns NR:ns ## COG: XF1766 COG0599 # Protein_GI_number: 15838367 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Xylella fastidiosa 9a5c # 39 252 43 256 260 255 66.0 5e-68 MNNTTPIKVLAAAVLLTFGFGLAAYAVPVNEGVSKMNHEQTVSDTLSARQQAIPLIAALM ASSQMDKLNAALNQALDAGLTINEAKEILVQLYAYTGFPRSLNALNELMKVVEARKQRGI EDVEGKEPVAPIPVGDELRRVGTANQTKISGAPVQGPLFDFAPVINQFLQTHLFGDIFAR DNLDWQSRELATVGALAATPGVESQLLSHTRASMRVGLTASQLRQLAQVLREHGENDAAT RAEMALQQALASH >gi|316918029|gb|ADCU01000020.1| GENE 152 165465 - 165944 290 159 aa, chain - ## HITS:1 COG:AGl997 KEGG:ns NR:ns ## COG: AGl997 COG1917 # Protein_GI_number: 15890615 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 27 156 20 149 151 144 56.0 5e-35 MIRHLRYLGLLLPFFTFSSWAAEQNPTVHIAPAGSQNAVYGSAENFTGRVRVDPLFKPDN DISVSGAYVTFEAGARSAWHTHPAGQRLIVTSGVGLTQQEGQPMQIIRAGDVVSCPAGVK HWHGAAPGSAMTHLAITGIVDGKSVNWMEKVTDEQYHAH >gi|316918029|gb|ADCU01000020.1| GENE 153 166049 - 166699 244 216 aa, chain - ## HITS:1 COG:no KEGG:Dd586_2855 NR:ns ## KEGG: Dd586_2855 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii_Ech586 # Pathway: not_defined # 1 211 15 225 228 245 67.0 7e-64 MTLLLLVLMGFHLHGEIVHEWAGIIFTLLIMLHLYLNRHRLWSLSPNIPLTMQRVNRVIN AVTFVVILTAIVSGIMLSRHILLELPFHNPANWVRKVHMTSVHWGMLILALHIGLHWKML ASFFCRILNISGSSHVANVIMPGVFSLIALLGLYGLLHQDYLDYLLIKVDFSFFDYDESA LLFYFRYLAIIVLFALMTRFLLWLFIFRKCKAMSPQ >gi|316918029|gb|ADCU01000020.1| GENE 154 166751 - 167407 373 218 aa, chain - ## HITS:1 COG:YPO2003 KEGG:ns NR:ns ## COG: YPO2003 COG0716 # Protein_GI_number: 16122245 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Yersinia pestis # 34 211 51 228 235 241 61.0 1e-63 MRIRKVFSGFLAMMVMGFLGQPAFSSENSSAPSRTLIIYFSQPEEMKPGAVDGFSGASVL QKNTPETGSTQFVAQLIQKQTHGDLYRIETATPYPRQHDALLRVAEKEQQTNARPSLKTP LPDLSNYDTIYVGYPIWWYTMPMVIYSLFEQNDFAGKTVIPFTTHGGSRLADSLRQIARM QPLARLVTRALSISRNDVSGPDVPAQVEQWVKQVQPQR >gi|316918029|gb|ADCU01000020.1| GENE 155 167472 - 168929 678 485 aa, chain - ## HITS:1 COG:YPO2000 KEGG:ns NR:ns ## COG: YPO2000 COG0642 # Protein_GI_number: 16122242 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 1 455 3 457 463 649 74.0 0 MPKRSISVHLALMFALSALLIVSVIGILLRSSLHDSLQKQMHNELLFRESLMSPWITART SADGWSTLANKFTVLTNSEGERVRYWIVSDNPRFSMGGTPPVGVEWSSLQEGFNKVPGAS EGACSLFLLVKTIPANGERPELRYIVAIDSTPYMGTLNAFTRTLLIIAALGVVIVALLGY IVSRIGLRPVGALSKEAQHLAPGDHGQRLNTRALPEELQQLASSFNGVLERQEIAWRQLD SFNADVAHELRTPLTNLIGQTQLGLSRRRSHDELEELLGSNLEELERMTSIVNDMLFLSH AHAGEHASQLTQVSLREETLKTAEYVEPSFAEKQLSLDVEGDVTAHIDRRLFHRSLANLL ENSARHSPSNSTVTVRLSEKGHQACVEVSNPGDPIAPEHLHRLFERFYRVDTSRARSDTH HGLGLSIVRAVAIMHRGDVFARSEKGINTFGLTFAKQPEPIRTKEPMSERPLSKPADKIV REPSV >gi|316918029|gb|ADCU01000020.1| GENE 156 168944 - 169624 654 226 aa, chain - ## HITS:1 COG:YPO2001 KEGG:ns NR:ns ## COG: YPO2001 COG0745 # Protein_GI_number: 16122243 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Yersinia pestis # 1 226 1 226 230 363 84.0 1e-100 MRLLLVEDEEKTSTYLNRALSESGFTVDVSADGAEGLHYALEFDYDAIILDVMLPGMDGY RVLEGVRAAKQTPVLMLSARGSVDERVKGLRLGADDYLPKPFSLIELVARIQALVRRRAT DGADITQLQIHDLHLDLLARRVFRAGTRLELTAKEFSLLSLLARHQGEILSKMMIAEQIW DMNFDSDANVVEVAIKRLRAKVDAPFDVKLLHTVRGMGYVLEVRPE >gi|316918029|gb|ADCU01000020.1| GENE 157 169639 - 170805 836 388 aa, chain - ## HITS:1 COG:TM1006 KEGG:ns NR:ns ## COG: TM1006 COG0667 # Protein_GI_number: 15643766 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Thermotoga maritima # 55 377 5 328 333 338 53.0 1e-92 MKNQNAPTMPERRKLLVAGAGIAAASLIPHVSAASQTSQVDSSRQLSQRNAAPGKRKLGK LEVSAVGLGVQNMSRKYDTSVPWRPEMINVIHRAFDEGVTFFDAAEAYGPFEVEKILGEG VAPFRDKIVIATKFGWNIDQQTGKRLPGLNSRPEHIRQVVDNMLKRLRTDRIDLLYQHRV DPQIPIEDVAGVVKDLMVQGKVMHWGLSEMGINTLRRAHAALPVTAVQSEYSMLWRGPEK QVLSVCEELGIGFVPWSPLGVQFLTGWIDENTRFAAGDFRATETRFSPENLPHNLQLVEL LKSWAIRKNAAPGQIALAWLLARKPWIVPIPGTTNKDHMLQNTAATGVSLTSAEMTELTR SLDAITIQGQRLPDAVQVYSDVEAPMKS >gi|316918029|gb|ADCU01000020.1| GENE 158 170856 - 171062 109 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVSPDECRPGYAGSRNQICRLRLGGEGCQHRDREITFLSGNGPDRDGQMFLTTLSDNCQL YVGNQGAE >gi|316918029|gb|ADCU01000020.1| GENE 159 171061 - 172110 841 349 aa, chain + ## HITS:1 COG:YPO2002 KEGG:ns NR:ns ## COG: YPO2002 COG1073 # Protein_GI_number: 16122244 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Yersinia pestis # 2 349 19 363 363 506 77.0 1e-143 MKFTLISAMLITAMAGATSVNAADYKKNPFTLVYDGAITENVEGKVNIHPVKYDLHGIQI AANVYTPANYDPAKKYPAVVVAHPNGGVKEQVAGLYAQRLADQGYITITADAAYQGASGG MPRSVDKPANRIEDIHGMADYISQYPGVDTARLGLLGICGGGGYSLVAAETDKRFKSIAT ISMFNSGLVRRNGFQDSQLDTIQLRLQQASDARAQEAAGGEVLYSGDANLTDEQIAKLPF ALYRQGYEYYWKTHAHPNSTFKYTTSSLMDLMSFDVTDHINLINKPLLMIAGTKADTLYM TEDAFAKATGTKDKELFLIDGATHIETYWVPKYVDQAMQKLDVFFTKNI >gi|316918029|gb|ADCU01000020.1| GENE 160 172241 - 173443 451 400 aa, chain - ## HITS:1 COG:RSc0216 KEGG:ns NR:ns ## COG: RSc0216 COG0477 # Protein_GI_number: 17544935 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 18 400 13 399 409 295 46.0 9e-80 MLNQQAQTQPVTANKTGLSFLLILSALMAVTSLSTDIYLPAMPVMAKDLQGDAELTITGF LIGFCIAQLIWGPISDRYGRRLPLFIGLVLFIIGSVGCALSTDIVQVVFWRVFQALGACT GPMLARAMIRDLFSRTRAAQMLSTLMIIMAIAPIAGPLIGGQMIKVTSWHAIFWLLAIIG ILMLMSLFWLPETLPAEKRSQASVTRAFHNYYALLTNARYMRFTLCLTFYYVAAYAFITG SPFVYITYFGVDPQHYGWLFAVNIVGLMAVSMVNRRLVHRYPLEALLRNAVFIATIAAIV LAVTTGLGIGGITVIVGTVFVFFSMNGIIAATSTACALDAVPNVAGSASALMGALQYGSG IISSLLLALFSDGTPWTMGWIIAVFTAASALMALTIPIKK >gi|316918029|gb|ADCU01000020.1| GENE 161 173599 - 174210 217 203 aa, chain - ## HITS:1 COG:no KEGG:Pecwa_1393 NR:ns ## KEGG: Pecwa_1393 # Name: not_defined # Def: hypothetical protein # Organism: P.wasabiae # Pathway: not_defined # 1 202 1 202 203 289 71.0 3e-77 MFDNIWLDRRHAPFNTTYLQRILRVINNATAEHARTMAVRVDLRLPDNMLINRQGLISRF IESLDAKIAARYRSKLKQGKRTYPCHLRNAWVREVGELNLKSHYHIVLFVNNDTFNSLGS YKEDGTGLASLIREAWLSALQLSHRSEHWTLAHFPSNPLYYLDINSSSYTAVYDQLMFRL SYFAKERTKSYSREERSFGCSQY >gi|316918029|gb|ADCU01000020.1| GENE 162 174928 - 175461 305 177 aa, chain - ## HITS:1 COG:no KEGG:Pecwa_1391 NR:ns ## KEGG: Pecwa_1391 # Name: not_defined # Def: hypothetical protein # Organism: P.wasabiae # Pathway: not_defined # 1 177 1 177 177 219 59.0 3e-56 MNNSPLLNHYQAWLDDFTRVNLFHGLCQQHITQWHRLAITASPIPGSSVTEVVIPQCLLP VTRTGRLGSCTAASSLTKRTDYTLLPGVLLSECYRLGKSRLADQLQMLFRLNIQPGMRQA LTLLCWCELATGKDMEEWYALHLPLPDTLTQWLAVKQRTYRGLKTLTDGYIRATQPM >gi|316918029|gb|ADCU01000020.1| GENE 163 175562 - 175774 233 70 aa, chain - ## HITS:1 COG:Z1188 KEGG:ns NR:ns ## COG: Z1188 COG3311 # Protein_GI_number: 15800709 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 9 58 15 64 65 70 60.0 8e-13 MTVKPTLLEDRFVDMAFITRLLGVSDKWIYRLIKDGIFPKPIKLGRSSRWLQSEVEAWLQ ARIDASRPQR >gi|316918029|gb|ADCU01000020.1| GENE 164 175873 - 176454 151 193 aa, chain - ## HITS:1 COG:no KEGG:PC1_2879 NR:ns ## KEGG: PC1_2879 # Name: not_defined # Def: hypothetical protein # Organism: P.carotovorum # Pathway: not_defined # 5 190 5 190 193 158 42.0 1e-37 MQRYYPHLKKVIPNDFLLNLINHHLNQILACHSKILAFRMDFDYQRGTNRFIRNSSIEIQ DDLRELTQAMITLPGVIGSFWVLEWTSEGAVHAHAIFYLNGQKHQKSFPFILQAGELWHQ ITYGEGKCQRCKPKEYHQDNINNVVEYRNNEAINSLRRIISYLTKEDQKYGYLIWGCNEV PAPARQGRPRTAK >gi|316918029|gb|ADCU01000020.1| GENE 165 177072 - 177824 333 250 aa, chain + ## HITS:1 COG:no KEGG:PC1_2881 NR:ns ## KEGG: PC1_2881 # Name: not_defined # Def: hypothetical protein # Organism: P.carotovorum # Pathway: not_defined # 5 242 57 294 297 134 34.0 3e-30 MVKYWSAEDFFEKSRREVEGKLIPFSELEWIDCERSLSFVANYIHAEYKLYTNNNTPSLL DITLPEWSLDSDKGGVNYDGLILLIDYQCRVSSFNNIRSTLERLKRSWLRIQKKFGNPFW FSSARYDAKYLADYQWVMSYFDKNKMINGNVVFWFEKNLNLKVHSIFDQWVEDKSDAEGE LFIIKTKKAWGQKKFRDSVANKKVLNTYISKDSKRQLDYLASQNEMKINELIEMLINDAY AKAKLKSWEN >gi|316918029|gb|ADCU01000020.1| GENE 166 177924 - 178787 556 287 aa, chain + ## HITS:1 COG:yfjP KEGG:ns NR:ns ## COG: yfjP COG3596 # Protein_GI_number: 16130550 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli K12 # 1 287 3 289 289 480 81.0 1e-135 MKQFDALQSLQQPLSGLPQWASERILQQINQLTHYEPVIGIMGKTGAGKSSLCNALFAGD ISPVSDVAACTRKPLQFRLQLGKRFMTIIDLPGVGESELRDAEYAALYREQLPRLDLVLW LIKADDRALAVDEHFYLQVIGEAYRHKVLFVISQSDKVEPTSGGEKLSTEQKQNISRKIC LLHELFQPVNPVCAVSVRLQWGLRVMAEWMIHCLPREASSPVAVQLSDPLRTDAINKKAR DDFGETVGSVLDTVSSMPLIPSPVRTVIQSVRDIVVSVARAVWNFFF >gi|316918029|gb|ADCU01000020.1| GENE 167 178881 - 179705 504 274 aa, chain + ## HITS:1 COG:no KEGG:JW2614 NR:ns ## KEGG: JW2614 # Name: yfjQ # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 273 1 273 273 503 91.0 1e-141 MSRLATRFGASNLIRRDRPLTREELFRVVPSVFSEDKHESRSERYTWIPTITVLENLQRE GFQPFFACQTRVRDPGRREHTKHMLRLRRVGQITGKQVPEIILLNSHDGTSSYQMLPGLF RAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYEVLGIFDRVEEKRDAMQSLMLPPPAQ QALAQAALTYRFGEDHQPVTAPQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGWNAKG GRTHTRAVRGIDGDVKLNRALWVMAEAMLSGFQS >gi|316918029|gb|ADCU01000020.1| GENE 168 179914 - 180624 263 236 aa, chain + ## HITS:1 COG:yfjR KEGG:ns NR:ns ## COG: yfjR COG2378 # Protein_GI_number: 16130552 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli K12 # 1 231 1 232 233 234 56.0 7e-62 MTQAERRHDRLAVRLSLIISRLVAGETLNMARLAAEFGVSVRTLRRDFRERLMYLDLEYR RGQCRLRSTGGGVQGELDALTFAHRAGLADIFPGLDRRLAGMLLTAGGMPCLVWQPPQSV SPASSLVFYRLVSAITACQRVLLLAEGERCDGLAPYRLISFDGCWYLTGELNGYITVHPL ATIHAVTVLNTTFTPLKRLSQLTTQAGFIRALPHFSCIREVLSPGPSEEEPGNTLI >gi|316918029|gb|ADCU01000020.1| GENE 169 180650 - 181186 524 178 aa, chain + ## HITS:1 COG:no KEGG:SG0278 NR:ns ## KEGG: SG0278 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Gallinarum # Pathway: not_defined # 1 176 1 176 179 269 80.0 4e-71 MTWHYEKNGIRHDNVTEGDITGLIMRGELTASTLVWRQGMTEWQPISATPLASALLHSTT PPALPGNRIPGGVVWTLAFAPFIGYALELWTAGLNGMSFDEAYEAVSGGQYWFITLLLNI ALGYLDERRLRKAEVDTTTFGKLAWLVPFYLWRRAKTLGQKPAYFWVWLVMLGLTVWA >gi|316918029|gb|ADCU01000020.1| GENE 170 181228 - 181665 353 145 aa, chain + ## HITS:1 COG:no KEGG:Dd586_2898 NR:ns ## KEGG: Dd586_2898 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii_Ech586 # Pathway: not_defined # 22 143 9 130 133 177 64.0 1e-43 MKTLIKILGITGSLLLCTEVQAQPYNRTLPAVVNDNNGNIFWCDAHRQVTGKCEAMSVDR LGGMVTVRSAPFKDCEGGLWGWITIMRNDVSKGFTITPDKKFGLTVKDLCRPGTVVTFKP NQKKPEYDDLVALYQGKELFRYRRF >gi|316918029|gb|ADCU01000020.1| GENE 171 181732 - 182142 345 136 aa, chain + ## HITS:1 COG:no KEGG:SG0277 NR:ns ## KEGG: SG0277 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Gallinarum # Pathway: not_defined # 5 120 1 121 137 66 32.0 4e-10 MLKMMTSAVPALILSLAAFSASAAQLPASLMDKDNPGQEYWCQGNDINTSMCSLTGVSDD HKFALIQDLPGPACEDLSFGIIDLVFNTGLNIPYDGGDCKGDVKAGFVRGTKDNALYVKI VRGSQTLRLYKVQTGY >gi|316918029|gb|ADCU01000020.1| GENE 172 182220 - 182456 203 78 aa, chain + ## HITS:1 COG:no KEGG:JW5023 NR:ns ## KEGG: JW5023 # Name: ykfF # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 72 1 72 79 117 76.0 1e-25 MSESHMLPPGPFTRQLAEAVIRRYHNISIEDDQGSHFRLVVRDSEGRMVWRAWCFEPDAG EELNRYIRKSGILRASSS >gi|316918029|gb|ADCU01000020.1| GENE 173 182542 - 183000 281 152 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_0307 NR:ns ## KEGG: EcSMS35_0307 # Name: not_defined # Def: antirestriction protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 152 1 152 152 301 94.0 4e-81 MTTQTQCELMPANEPQFDLTATPVPDEQRLDFWPLYFGTIPQWITLEPRIFAWMDRFCDE YSGGIWSFYTLSNGGAFMAPDAEGDDKWHLFNGMNGNGAEMSAEAAGIAVCLIEYSHHAC RTECDAMTEHYYRLRDYALLHPESSAILRIID >gi|316918029|gb|ADCU01000020.1| GENE 174 183012 - 183491 420 159 aa, chain + ## HITS:1 COG:yfjY KEGG:ns NR:ns ## COG: yfjY COG2003 # Protein_GI_number: 16130559 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli K12 # 1 159 2 160 160 271 93.0 3e-73 MEQSLIPLAPVLPLTAQRMVKRALTLLDRHLRETGVAFISTQAARDWLTLKMAGLEREEF MVLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSLA DKTITQHLVQALQLVDIRVPDHLIVGGAQILSFAEHGLL >gi|316918029|gb|ADCU01000020.1| GENE 175 183746 - 184063 244 105 aa, chain + ## HITS:1 COG:no KEGG:JW2626 NR:ns ## KEGG: JW2626 # Name: yfjZ # Def: antitoxin of the YpjF-YfjZ toxin-antitoxin system # Organism: E.coli_J # Pathway: not_defined # 1 105 1 105 105 200 88.0 1e-50 MSNTTWGLLRDITPSLGARLVQEGNRLHYLTDRASITGQFSDAECLKLDVAFPHFISQME SMLTTSEMNPRHAHCVTLYHNGFTCEADTLGSCGYVYIAIYPTQR >gi|316918029|gb|ADCU01000020.1| GENE 176 184084 - 184407 234 107 aa, chain + ## HITS:1 COG:no KEGG:JW2627 NR:ns ## KEGG: JW2627 # Name: ypjF # Def: toxin of the YpjF-YfjZ toxin-antitoxin system # Organism: E.coli_J # Pathway: not_defined # 1 107 1 107 109 184 82.0 7e-46 MKNLPATISRAAKPSLSPVAVWQMLLTRLLEQHYGLTLNDTPFSEETVIKEHIDAGITLA DAVNFLVDKYELVRIDRRGFSWQEQTPYLTIIDIMRARRVLGLMSRN >gi|316918029|gb|ADCU01000020.1| GENE 177 185090 - 185794 463 234 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCANDDNEHEGFKHIYLALQEKRTHIQYTTQKALKLQRYMLNLASHQKQVGEDAYRALNH LYVYRRHIEKIQASPETAPPLNMNKMLLLANELGFTADRIQKTTLDSANAMARIANSFLM TILKSQHYQWREKVYLSVLRRSDNVPTDDEFHCALGQWYHGDGRRDFGHLPAYSALGDAH RKLHEISVQLAKEGFKSMDWSDITQRLDEFESASQQVIYTIDKLDEQILALLEQ >gi|316918029|gb|ADCU01000020.1| GENE 178 186202 - 186603 141 133 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNFESNLGGATSNVDTYTFHMVVDFVRELNVNIAAAPDAIDFGILSNTQSAQRDINITFN GLPSKSSVMVDYVFSGLPAWAKASVLDDVSAQVTSETITANSGDRITRTLKIESPQAQTG DIDGRLTINAALN >gi|316918029|gb|ADCU01000020.1| GENE 179 187313 - 187840 93 175 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTLNKAVRLAFSSLLTLLAAGHQGAQAATSASATVTIKATFSSQPCTLTMPSTVHLGGLL NGTQSYNPVKIDINCPTPTNTVIYGEQIGSAMVGGNASRMEMTGPVGVTGTPAQFWLSTE GKEIDLTGDGATDETKGFCAGMDNRSCTLTPSTLVVQDTPRGQTTATIRFNINYV >gi|316918029|gb|ADCU01000020.1| GENE 180 187827 - 188528 447 233 aa, chain - ## HITS:1 COG:PSLT016 KEGG:ns NR:ns ## COG: PSLT016 COG3121 # Protein_GI_number: 17233481 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 8 233 4 230 230 265 57.0 5e-71 MNNRKKVLLRTVLAAVLGTTLVSSAMAAFTLNGTRFIYEEGKKNISFEVSSSSQETYGGQ VWIDNVSQNKADVFMVPSPPFFKVGPQGKQIVRLMNVNPALPSDRESLFRLNVQEIPPKP KETDGSVLAIAMNTQVKLIYRPKSLTDGRKEAEKQLTLVSRDGSVWIKNPTPYYFAVTKV KSQGKDVKLSSEAQRALAQLAPYSEASTGHSGLNEVSVEALNDWGGAVSYDVK >gi|316918029|gb|ADCU01000020.1| GENE 181 188521 - 190860 771 779 aa, chain - ## HITS:1 COG:PSLT017 KEGG:ns NR:ns ## COG: PSLT017 COG3188 # Protein_GI_number: 17233482 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 3 779 51 802 802 720 50.0 0 MKYPAGQYYIDVSLNGARIGRTELTISPDDEQTGLLCLSPEWLQNAGIFFKPEAYQDTFD TVRGCYQLGRKDSTKVSFDLGSQSLDFGIPQAWLAEKNDASRWDYGISGLRLKYNGNFNQ NVQTRNNNGYGDDSLNAYGSFNTSLNVGRWILSSDMNAARNAGISEFTTNDLTLSTAISQ IKGDLLLGRSQTKTELFNDFGFYGAALRSNSNMRSWQTRGYAPVITGVASSASRITVSQG GYTIYSRVVPSGPYRLDDINSTSNGNLVVTVEDNSGHKTVTEYPVATLPSLLRPGDYNYN LAVGQRNDSNRLSEAFSSGNGTFGLASLDWGLSSTTLNMATLLHSGYQAAGIGVTQSMGM WGALALSVNGSRAEYDDGSRRQGVSATAKYAKSFTNKTDIQLLTYRYQSPGYTEFASWDP KYGDRRKIYDPDGLGLNDHYVWFDGREKARYEARLSHRMDNIYVSGSFWQQSYWNRDKDA IGASLSASTTILDGISLYLSGNYSRSAWSTTDEYSGSLGVSIPFTLGGVRHYSSNSVGYS RYSGTSFNTSTSATLNERLNYSVNAGTDERSNNTAGASVSYAFDRMQTNLAVSKSRDTTT LSGNVSGSAIATAPTGLLLTKESSDTVAVVRIKDTPGVTFNGSLPTNGNGSTVLYLTGYN PTNISINPENVPDSAELLNTSYEVVPTEKAIIYREFGFQNVQRYIVRVRDAHGNVLTGGS ATTEQGLDAGFITNNGVLLMNLLATPKTITVSQSNGKQCRFSASGLKENIVTVQEIRCE >gi|316918029|gb|ADCU01000020.1| GENE 182 191134 - 191649 411 171 aa, chain - ## HITS:1 COG:no KEGG:ROD_p1171 NR:ns ## KEGG: ROD_p1171 # Name: not_defined # Def: putative fimbrial protein # Organism: C.rodentium # Pathway: not_defined # 10 171 11 172 172 101 46.0 1e-20 MKKNLLAVSALALAVMSGSAMAVNEIQFLGVVTDTTCDLTPSVNGGVNSLVQLGSVTKNA ISTTPVDFVLKADPAATGCGNLTGKATIGWNGPFNSEGLKAQGGAATDAVTLISTKNAQT TAVQSITQSHLSIDFDATKLTTDGAQFTATLKGGNDVGDYNSTAAYVVAYN >gi|316918029|gb|ADCU01000020.1| GENE 183 192381 - 192722 244 113 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRTHEENDLSAMSKITQGELTPGEVDIRLFRLLSTVCVMHSPSIRQSLEDVLVHGKSRS EACEANGVAQSYFSVKYRHMQMVSRTVARICALIYEEGHTMTGSSLTHIETRK >gi|316918029|gb|ADCU01000020.1| GENE 184 192742 - 193548 100 268 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIYSKNWTHQVAIEYTYRSIKQTRIIIQGTRDTDILVSYAINTQPNFLIIDDAPRNAVAL TLALRQQCPDTAIIFMQDEFLFSDKIVVKYFDGIALKKYDALMNDPPCLLLAEYHCLLST LREEVNLTKLPSWRTQGVSEALQSIKQLMHVHFSHLIASPRAQEVVLGWLVKGVEPITAG RLLGCSSKVVYHYRLMAMKVLGIQNRTRDFIASLTVTAGPVSYYPMREHRPALVSSPPPL PSHEQVKIKTSSDEKQGLANIQEYGVTV >gi|316918029|gb|ADCU01000020.1| GENE 185 194467 - 194625 63 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNMNCRSHSWDKEKHPHQHHGGLSPSEKINEKGRQRCTDFVNYYILRMVHAI >gi|316918029|gb|ADCU01000020.1| GENE 186 194696 - 196426 1711 576 aa, chain - ## HITS:1 COG:ECs3933 KEGG:ns NR:ns ## COG: ECs3933 COG2268 # Protein_GI_number: 15833187 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 4 544 5 542 553 683 81.0 0 MFEMDNIPYWGFVSFGVLIILLVIGIIFSRLYERASAEQSFVRTGLGGLKVVMSGGAIVL PIFHELIHINMNTLKLEVSRSMKDSLITKDRMRVDVVVAFFVRVKPTIEGIATAAQTLGQ RTLSPEDLRILIEDKFVDALRATASQMTMHDLQDTREHFVQGVQNTVAEDLTKNGLELES VSLTNFNQTSKEFFDPNNAFDAEGLTKLTQETERRRRERNEVEQDIEVAVREKNRDAMSR KLEIEQQESFMTFDQEQQVKTRSAEQSANIAVFEAERRREAEQSRISTERQIQEAEIARE QAVRTRKVEAEREIRIKEIEQQQVTEIAAQDKDIAIASKSEQQSQAQARANDALAEAVRA EEHVVTTRETAEADRAKQVALIVAKQSAETEAVQLTLKAQAEKEAAEMQAAAIIKLAEAT LKKGLAEAEAQRALNDAVNILSDNQTSLKFKLALLQSLPSIIEKSVEPMKSIDGIKIIQV DGLNRSGSAAAGSSSEPSTGGGSNLAEQAMTAALSYRTHAPIVDSLLREVGLSGGSLAAL TAALPHGLGDAALTANDLPVQEDVPVVDSENHPRPA >gi|316918029|gb|ADCU01000020.1| GENE 187 196463 - 196933 133 156 aa, chain - ## HITS:1 COG:no KEGG:ROD_35931 NR:ns ## KEGG: ROD_35931 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 2 156 56 209 209 141 45.0 9e-33 MQALSWLHIGKLPLLVMLVLLLGSFAIIGISGQYLMISLLQKPLPAGLMALIAFVLSLPT LHFIGRWLAPYLPKDESFAVSEDSFVGSMALVTQSAEQPGMSAECKIVDTYGQSHYLLIE PENPDVIFTRGERVLIIAKITSARFLASKNPWPNLL >gi|316918029|gb|ADCU01000020.1| GENE 188 197195 - 197374 116 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKDNFQGMFAAETSMVKIAFVKYQKLTLGLEKYFTLRLDIKIKQSLSILSRYKSEIFTT >gi|316918029|gb|ADCU01000020.1| GENE 189 197449 - 198408 780 319 aa, chain - ## HITS:1 COG:STM3848 KEGG:ns NR:ns ## COG: STM3848 COG0583 # Protein_GI_number: 16767132 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 318 1 318 319 515 85.0 1e-146 MKKSISSLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAASKSLSKLRSWFGDPLFVNTPL GLTPTPLMISMEHPLAEWMQMSNLLLDKPHNETPHGLKFELVAESPLMMIMFNSLSQQIY QRYPQATIKVRNWDYDALDAITRGEVDIGFTGRESHPRSREQLSLLPLSIDYEVLFSDLP WVWLREDHPALQEEWNLETFLRYPHISICWEQSDTWALDDVLQEVGHKRNIALSLPGFEQ SLFMAAQPGHSLISTAPLYCQRYNQLHQLPLVARPLPFDEALREKLMVPFTLLWHKRNSH NPKIIWLRETLKALYKNLT >gi|316918029|gb|ADCU01000020.1| GENE 190 198377 - 199558 716 393 aa, chain - ## HITS:1 COG:ECs4647 KEGG:ns NR:ns ## COG: ECs4647 COG0477 # Protein_GI_number: 15833901 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 527 78.0 1e-149 MTRFLICSFILVLLYPTGIDMYLVGLPRIAADLSASESQLHIAFSVYLTGMGCAMLFAGK IADRSGRKPVAIVGSVIFIIASSLCSLAQDSLLFLTGRFIQGIGAGSCYVVAFAILRDTL DDRRRAKVLSLLNGITCIVPVLAPVFGHLIMLKFPWQSLFYTMMTMGFLACMLSLFVLKE TRPESASASSPSQITAESLLTRVFLSRLAITTLSVSVILTFVNTSPVLLMEIMGFERGEY AMIMALTAGVSMAVSFSTPFALDVFKPRTLMITSQGLFLVAAVVLSLANSNTVALFGLTL ICAGFSVGFGVAMSQALGPFSLRAGVASSVLGIAQVCGSSFWIWLAAIIGIDALNMLIAI LIVCSIVSLSLIMLVTLKSPVPNHEEIHQQSRS >gi|316918029|gb|ADCU01000020.1| GENE 191 199745 - 201400 479 551 aa, chain - ## HITS:1 COG:VC0393 KEGG:ns NR:ns ## COG: VC0393 COG3307 # Protein_GI_number: 15640420 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Vibrio cholerae # 23 537 37 567 597 156 26.0 9e-38 MRRISLRAGYYSALVPALFFGGIVMTVYLPNMGGSGLSLPLNILSWIALCCFALLIIQAP KVWQRYRRSASLFWLYAGCVVLVIRALLTPLPWFNDALIVAIGIVAGLSFYRLLLQLPWR RQHLFAILSTLWIASVLQCVIAVIQLFHLKAAAWWEFSPAQLRPYGIFQQVNVLASFIAC GIAATLLLLLYRSKTTRWKRVLLHISLTLQGFVLYACQSQIGYLSTALVILACLGLFWSQ RFIIFAAIISLVAGGILSFAVHVWLQFPTVVHTDSTHTRLLIWQHSGRLFSMHPLFGWGV GSFESVFLHQFGGQITNVGIRTVSHPHNEILLWLVEGGIFAAVGMLMLLIAIITLWLNGG RLQRAMLLTASPIALHMMTEFPLYQSAPHWILLIVLLRCADRPYSTSTMPMFMKGIRGGM IFFTVFAAGVLIQTLYLQNQLTTVERNGTQYELPSRAVWQTVLQQDRYEYDRQMGELLRF NHVQDINALRNVEQWAADYTLRHPDNNLYAVRIQIATYLNDPVQAEQLTNEARWLFPADP RWTVNRNTEQP >gi|316918029|gb|ADCU01000020.1| GENE 192 201403 - 202077 438 224 aa, chain - ## HITS:1 COG:no KEGG:ROD_35031 NR:ns ## KEGG: ROD_35031 # Name: not_defined # Def: putative transcriptional regulator # Organism: C.rodentium # Pathway: not_defined # 1 218 1 216 220 117 32.0 4e-25 MELQLCIFDSDVSFVQGIKAIIDTKNISTQSTLEYFDRDFQKLVDHLATPIWGNKQQIIL CDIASLPEARFKALSLLRHQYLKGEQRQLIMLVEEGQVPLLSALFTELPLASWFCKKEPP QELVNMLEHLRLTSFSAPYYSSMIRKSIEHYRNQAFSVPRYGITHTEWWLMEEILKGQSL TQIALNSGISVKSVSYRKRRLMKKLNVTSTVSLAQTFRHLTGFA >gi|316918029|gb|ADCU01000020.1| GENE 193 202091 - 202639 243 182 aa, chain - ## HITS:1 COG:yfcP KEGG:ns NR:ns ## COG: yfcP COG3539 # Protein_GI_number: 16130268 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 13 181 11 178 179 75 29.0 7e-14 MPQRHQLYGAAIFLLLSGPIYAQTELIGGDMRFHGTVEALPCSVKPGGDKIGVNFKQIST KDLYSNKTSPPVPFTIPLENCSDAVFKTVSVTFSGIESTELPNHLIINPVSPSSASGVAI GLKESNGSAIELNKPTTAENIANGSMDLTFQAWVAGEPTALQNGDITLGPFTATANYTLT YQ >gi|316918029|gb|ADCU01000020.1| GENE 194 202658 - 203716 567 352 aa, chain - ## HITS:1 COG:STM0174 KEGG:ns NR:ns ## COG: STM0174 COG3539 # Protein_GI_number: 16763564 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 36 352 32 359 359 90 25.0 7e-18 MKKVNQFSRRWSTALILAALAYTSSAQAWIEGEVVPNSGTHTYDFDLETMDISNNVIGGT ISKSWDLGGNFGVTEYCTQRINDARYYSTTSTMTPSTSNPGYYRLNEYFDVKVEVWIAGN RSEYVTSPFTDETNRYSESCRPPSSRFNNVRSGSKGKITFRITKPVINGIVLVDHELVKV FGRRGLLSAGVLSGEALSTINIRSGIITVPDKCIINQGTPISVEFGAIPNTSEKLNGNNY VQQVPIQVQCKGGSFDTGYLNIKLGIQSAGSGVASFNSDYLGTNGANDRRDLGIVIKDSS GSTVVPNQFYDVPGFNNNQGVWNLTAAPIAKPGSIIPEGEFDAAATVVAQFQ >gi|316918029|gb|ADCU01000020.1| GENE 195 203716 - 204327 383 203 aa, chain - ## HITS:1 COG:Z4971 KEGG:ns NR:ns ## COG: Z4971 COG3539 # Protein_GI_number: 15804092 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 EDL933 # 3 190 2 165 178 67 26.0 1e-11 MKQFRLPIIVLAAMPLMLQAAPTFRQDFSHVEGENGVVHFSGNVYVAPCVLDPQSREQYI DLGDISARLFHQSGDRSKLIPFTLRLRDCLRGASQSASDITSHSVGQPPQRYTSGEQAVS LRLEGESSPINQDLLRIQGAVKGAGIRLLDDKGHALALNQKANTWLLSPGDNELQLNAAL ESTQSSISAGDFRSLLRLIMEYQ >gi|316918029|gb|ADCU01000020.1| GENE 196 204349 - 205110 457 253 aa, chain - ## HITS:1 COG:YPO0699 KEGG:ns NR:ns ## COG: YPO0699 COG3121 # Protein_GI_number: 16121020 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Yersinia pestis # 1 248 1 238 239 227 47.0 2e-59 MNKLTVKRWLSTLCLFSAITGSAHAGISLDRTRLIITGNDRSASANLSNTSPDIPFLAQS WVEDAEGKKITSPLVVLPPLQRINGGQKGVARVTKTNGIDDLPQDRESLFYLNVREIPPK PTKPNVLQLAMQSRIKLFYRPSAIVPKSKGEIWQNQVVFHKQSGNRMTIENPTPYYITII GLAQKTVKEGGGKLTQFPGVLVAPKSSLDIDVTNSAVSSFAMMYINDYGGHPELKYSCQG SVCKALPADQQPR >gi|316918029|gb|ADCU01000020.1| GENE 197 205158 - 207632 1859 824 aa, chain - ## HITS:1 COG:YPO0698 KEGG:ns NR:ns ## COG: YPO0698 COG3188 # Protein_GI_number: 16121019 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Yersinia pestis # 8 823 5 822 826 699 44.0 0 MLYSPKTKKNLLAVLIALFCYSDRVAADPMVEFNTDVLDASDRKNVDLKRFSSDNYVVPG NYLLDIRVNGQAVSQQNVIYRATANNADTSFVCLTPEQVDFLALKKEAQEKIHHVDPQCL DIKAIPGVELNNHEGILDITVPQAWMKYNDPDWVPPERWDDGVAGLVFDYSLSGQMTHQL KEGDSTHSLSAYGQTGFNAGAWRMRGEYQANYDNDGQHNLDWNQVYAYRPLPSLASKLTV GEIYLNSQVFDTVRFTGINMISDERMLPPSLQGYAPEIHGIAKSNAKVTVSQSGRVIYET TVPAGPFNIQDLRSSVRGTLDVKVEEQDGSVSTFQVNTANIPYLTRPGYVRYNTSIGKPS RYNHQLEGPAFYVGDFSWGISNAWSLYGGTMLTGNDYNAWSLGLGRDLNVLGALSADVTQ SISRVPDQDSQKGMSFKLSYAKTFDEYNSAITFAGYRFSQKTFRSLSQYLDERYQKYDNV GREKEMYTITGNKTFWADNPDWATTMFLTYTHQNYWDRSGQDRYGITLGRSFRLAGVNGI TANVSAWRSDYQGRRDDSFALSLSIPIGDSRWMGYDLQNSAGSTTQLASYSDNSDYNNLW RVRAGLGQNDRAAMDGYYQHRSQMAELNANLSYQQSRYVSVGGTMRGGFTATQYGAALHN SSATLDTARIMVDTSGIAGVPLNGKHAWTNSQGVAVVPDVVSYNSFDTRIDVDALDEDIE ASKAISTTTLTEGAIGYQRFAVAQGEKMMALIRLADGSFPPFGSEIVNRDGVSVAMVMDN GMAWIAGVTPGEKLSANWNGKSQCQLKIPDHNLNSSKQLLLPCQ >gi|316918029|gb|ADCU01000020.1| GENE 198 207813 - 208355 415 180 aa, chain - ## HITS:1 COG:ECs2113 KEGG:ns NR:ns ## COG: ECs2113 COG3539 # Protein_GI_number: 15831367 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 22 180 31 187 187 69 32.0 3e-12 MFIRSWLYIAIGVIPILAHAQTGNITPGSLSMKGELIEAACVIDPLYREQWIEFGNISAR DIAQGSGVLLTKNFNIKLTGCALASVIKPGSYYHSANVTFTGIPDSSDNQLLAIDGEARG FAIQLADTHGEILTLGKNTPDYALMDGDNILNFSASLVSTGRNIRAGDFYATARFFMDYL >gi|316918029|gb|ADCU01000020.1| GENE 199 208434 - 208976 470 180 aa, chain - ## HITS:1 COG:YPO2759 KEGG:ns NR:ns ## COG: YPO2759 COG3539 # Protein_GI_number: 16122963 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Yersinia pestis # 10 179 7 175 176 76 32.0 3e-14 MKTNKLAIIAALAAGMTSMTAFAAYTGSPTTGEIQFQGELVNSACGLAPSSSPVVVDFGQ IPTSALANGQQAGNIQKNIELQDCDTTVAKTATVTYNPNTINTADNTLAAFTSGTASGAG IGLKDNASNNVVWGQKMTPVQLVNGTNKIPFVAYLKADNASGAVTPGAFQSTVNFQIDYQ >gi|316918029|gb|ADCU01000020.1| GENE 200 209740 - 209961 253 73 aa, chain + ## HITS:1 COG:no KEGG:Spro_3367 NR:ns ## KEGG: Spro_3367 # Name: not_defined # Def: putative outer membrane lipoprotein # Organism: S.proteamaculans # Pathway: not_defined # 1 73 1 73 73 97 89.0 1e-19 MKKLIAIVLFSTLLAGCATESPCVPSYDSEGRLVHTNTCMKGTTQDNWETAGAIAGGAAA VAGLTLGIIALTK >gi|316918029|gb|ADCU01000020.1| GENE 201 210047 - 210238 209 63 aa, chain - ## HITS:1 COG:no KEGG:LF82_2523 NR:ns ## KEGG: LF82_2523 # Name: yaiA # Def: uncharacterized protein YaiA # Organism: E.coli_LF82 # Pathway: not_defined # 1 63 1 63 63 69 68.0 3e-11 MAGKPPYPRHAEIVEIRKGTQGATEIWYELRADHPRPNTLISEHPTHQEALDAKTRYEDE KKE >gi|316918029|gb|ADCU01000020.1| GENE 202 210334 - 211254 651 306 aa, chain - ## HITS:1 COG:YPO0797 KEGG:ns NR:ns ## COG: YPO0797 COG0583 # Protein_GI_number: 16121109 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 291 1 295 313 412 71.0 1e-115 MSAISLRQIEIFHAVMTTGNLTEAAALLNTSQPTVSRELARFEKLLQMSLFDRVRGRLRP TAQGLQLFEEVQRSYYGIERIVDAATHIRQFQQAQLSIACLPAFSQSLLPNVCRTFLGEY QDVSLNVIPQESPLLEEWLSAQRYDLGLTENTYTPPGTERRTLATLNEICVLPSNHPLLS KKRLTPQDFEEQRYISLSPNDGYRQTLDALFHREQVSRQMVVETHSAASICAMVCQGVGV SIVNPLTALDFVGCGVEIRPFSVDVPFTVSLIVPKHRPSSALVEAFIAHLEGYISEVYLR LKGSFP >gi|316918029|gb|ADCU01000020.1| GENE 203 211419 - 212681 1016 420 aa, chain + ## HITS:1 COG:YPO0796 KEGG:ns NR:ns ## COG: YPO0796 COG0019 # Protein_GI_number: 16121108 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Yersinia pestis # 1 420 1 420 420 697 79.0 0 MPRSLNDRTTSLNADNLITLPSRFGGPVWVYDGEIIKQQIEKLREFDVIRFAQKACSNIH ILRLMHQQGVKVDSVSLGEIERALLAGFQPGGSPSQIVFTADVLDEATIARVVELNIPVN AGSADMLKQLGERSAGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWFEELPQALALIKQ YDLELIGLHMHIGSGVDYQHLAQVCDTMVRQVIELGHDIQAISAGGGLSIPYQKGDESIN VSHYYGLWNDARERIARHLGHPVHLEIEPGRYLVAESGVLVAQVRAVKNMGSRHFVLVDA GFNDLMRPAMYGSYHHISLLPADGRDVTAQPRVESVIGGPLCESGDVFTQKAGGEVETRS IPAAQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGESRLIRRRQTIEELLALEMV >gi|316918029|gb|ADCU01000020.1| GENE 204 212912 - 215038 1756 708 aa, chain + ## HITS:1 COG:ECs3587 KEGG:ns NR:ns ## COG: ECs3587 COG3604 # Protein_GI_number: 15832841 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Escherichia coli O157:H7 # 1 704 6 686 692 662 51.0 0 MNPVWQDMLHQATQTLLAQRTLSELMQALHGLSFSVIRFDRVNILRLDPLHNRITHYGYE PESKQMQCSNDVLLAEGPGGKVWADQQPICCQREQFIQQFPQVSELAQYRSLNVYYQLPL TTPRQRLGGIEFIKHGNQQFSESELALALPLSDVVASVLENILEREHVQLEEESLRRERD HYRILVDVTNAVTSKLELDALAAEVSKEIHRFFGIDYIGLSIFDEQEDRFKAYVACYQSG KPVLREQKYLPLEGSLAQQVVQSEEMLLMDLQDSTRLAPQDRQLAQMLEFGHQTICQLPL VFGNKVLGVLKLAQCQPAIFSDNNLKLLRQIAARIAIAVDNALAYGEISRLKDSLVHENR YLTEQIRQDSDFGEIVGQSAAIKSVLEQVEMVASSDCSVLILGETGTGKELIAQAIHNLS SRNQKRMVKMNCAAIPSGLIESDLFGHEKGAYTGATSQRMGRFELANKSSLFLDEVGDIP LELQPKLLRVLQEREIERLGGNKVIPVDVRLIAATNRDLKQMVLDREYRSDLYYRLNVFP IVIPPLRERPEDIPLLVKFFTRKIAKRMNRTIDSIPTETIRMLCDLPWPGNIRELENIIE RAVILTRGPVLNLQLNELQYHLSPPLVNKPAREIPSSSSTWTMPKASKPAEKVPHEQDGE LSERERILNALRETNGIVAGPRGAAARLGLKRTTLISRMQRLGISAKD >gi|316918029|gb|ADCU01000020.1| GENE 205 215349 - 215813 444 154 aa, chain + ## HITS:1 COG:no KEGG:ETAE_2909 NR:ns ## KEGG: ETAE_2909 # Name: prp40 # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 154 1 153 156 215 69.0 3e-55 MKVSELTEKSLYIHDKNEKLMAQWALYKSSLIKAATSSKLKIFHEFSCGDGDSVNFTVFD HFMVEVKLADEFYSKKIQYGLRMNDEQGEDHFVEISHSTIDENGLIDGTVNNRSMDAVLE HYLDKIHDLYETLYQAMNTNQPVRELLVGKLGAH >gi|316918029|gb|ADCU01000020.1| GENE 206 215869 - 216897 812 342 aa, chain - ## HITS:1 COG:ECs3586 KEGG:ns NR:ns ## COG: ECs3586 COG0309 # Protein_GI_number: 15832840 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 21 342 1 322 322 463 72.0 1e-130 MSEWSKDDVITMAHGSGGRAMQQLLDTLFLPLFSNPALDEREDQARLPLSIFNQHGDRLA FTTDSYVIDPIFFPGGDIGKLAVCGTANDLAVSGAQPKYLSCGFILEEGLPLLDLEKIVR SMAATAKAANIQIVTGDTKVVQRGAADKIFINTAGIGAIPNDIHWGASEIQPGDKLIVSG TLGDHGATILNLREQLGLEAELISDCAVLAPLIAPLRNIPGVRALRDATRGGVTAIMHEF ANASGCGIDVIEQSLPVKNAVRGICELLGLEPLNFANEGKLVIAVAPEAEQAVLDSLHAH PLGVDAATIGDVTEGKQVRLTGMYGTSRLLDLPHSEPLPRIC >gi|316918029|gb|ADCU01000020.1| GENE 207 216912 - 218027 1001 371 aa, chain - ## HITS:1 COG:hypD KEGG:ns NR:ns ## COG: hypD COG0409 # Protein_GI_number: 16130636 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli K12 # 1 368 1 368 373 540 69.0 1e-153 MQFVDEFRNPELAKKLVQRITERVRSLPSHCRLPLQLMEVCGGHTHAIFKFGLDQLLPPE IEFVHGPGCPVCVLPMGRIDECVEIANQPDVIFCTFGDAMRVPGRHGSLLDAKRKGADVR IVYSPLDALTLAQQNPDKEVVFFGLGFETTMPSTAVTLQQAKALGLKNFTVFCQHITITP TLRSLLQQPDVRIDGFLAPGHVSMVIGAHPYEFICEDFHKPLVITGFEPLDILQALDMLV AQIAEERCSVENQYRRIVPDHGNAIAQKVLDDVFVTKDSSEWRGLGEIAHSGVGLSPAYA QFDAELRFHPQEQKVADDPRARCGDVLTGRCKPADCPLFGEGCNPQNAFGALMVSSEGAC AAFYQYRRGLE >gi|316918029|gb|ADCU01000020.1| GENE 208 218041 - 218337 385 98 aa, chain - ## HITS:1 COG:STM3143 KEGG:ns NR:ns ## COG: STM3143 COG0298 # Protein_GI_number: 16766443 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Salmonella typhimurium LT2 # 1 76 1 76 82 119 75.0 9e-28 MCLGIPGQVVAVGDDIHQMATVDVCGVKREVNIALVCEGSPQDMLGQWVLVHVGFAMSIL DEAEAKDTLDALMAMQEVEEDVGYFLRNGEPAPQVSEK >gi|316918029|gb|ADCU01000020.1| GENE 209 218328 - 219443 692 371 aa, chain - ## HITS:1 COG:hypB KEGG:ns NR:ns ## COG: hypB COG0378 # Protein_GI_number: 16130634 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Escherichia coli K12 # 117 371 35 290 290 377 72.0 1e-104 MCTTCGCAAGEQRIEGDDHHHDHEHAHGHTHPHGDHHHDHEHHHEHAHGHHHDHEHHGHE HHGHHHHAQDEHPQTVVVHHHYHHTGDVHHHHYNYVLASDAELHLHDHQHKHKNKNKNKG KHQHIHEEKFVPEQQDNDLHYGKGEAGSHAPGMTQRRMLQIEQDVLGKNNHLAEHNREHF TQQHIAALNLVSSPGSGKTTLLTETLKRIADRYSCAVIEGDQQTTNDAERIRATGVPAIQ VNTGKGCHLDAQMVHDAMHRLDLPDHSLLFIENVGNLVCPASFDLGERHKVAVLSVTEGE DKPLKYPHMFAASSLMIINKIDLLPYLHFDVEACIANAKRVNPQITVIQLSATSGEGMDA WLAWLETNVCA >gi|316918029|gb|ADCU01000020.1| GENE 210 219461 - 219802 311 113 aa, chain - ## HITS:1 COG:STM3144 KEGG:ns NR:ns ## COG: STM3144 COG0375 # Protein_GI_number: 16766444 # Func_class: R General function prediction only # Function: Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) # Organism: Salmonella typhimurium LT2 # 1 113 1 113 113 150 65.0 6e-37 MHELTLCQSAFDIIEQQAKANNVKRVTGVWLEIGALSCIEESAVHFCFDIVCRGSVAEGC KLHITTQPAQAWCWDCSQSITVSAHDAGCPHCQSHNLRVDSGDSMQIKQIEIE >gi|316918029|gb|ADCU01000020.1| GENE 211 219912 - 222194 1387 760 aa, chain - ## HITS:1 COG:STM2842 KEGG:ns NR:ns ## COG: STM2842 COG0068 # Protein_GI_number: 16766148 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Salmonella typhimurium LT2 # 2 750 11 741 746 812 57.0 0 MLRVKGKVQGVGFRPFVWQLAQRLKLQGEVSNDAQGVLIALRLPADVAYFCHLLRQECPP LARIDSISEHEWTGGELPDEFCIVESGKGKMDTQIVPDAATCPECLREMSDPDNRRFGYP FINCTHCGPRFTIIHRMPYDRPFTAMASFPLCPTCAQEYQNPANRRFHAQPTACADCGPH LWCSNRAGGQPFTGQQAWKELIDVLLNGGIAAIKGIGGFHLACDASNPQAIQLLRERKRR PAKPLAVMLPNEHWVRAFCRDDVSADLLSLLKSPAAPIVLLPKSSLVLDGIAPGLDEVGV MLPSNPVHHLLLQKIGRPLVMTSGNANGLPPALSNQQALHELTGIADIWLLHNRDIVQRA DDSVIRWHTNGSEMLRRSRGFVPDSFDLPEDFRHLPSIAAVGGDLKNTFCLLKGNRAVLS QHLGDLSDERVQQQFTQTWELLHQIYQFVPEALACDLHPAYASTQLAQRWAEKAALTCLP IQHHHAHLVACMAEHNIALDTPPLVGLALDGIGYGTDDSLWGGECLRVDYRQMQRLGGLP AVALPGGDLAARQPWRNLLAQLLRFVPHWQQYPEAQFILSQPWQILQRAVERNLNSPLAS STGRLFDAAAAALNICAEAISVEGEAACRLEALAQQAKSKNAPISLPLDEQNNLDMAVFW QQWLSWQAPPEERAYAFHAALAQGLADLVRVHAEAENCRTIVMSGGVLHNRLLRQLLHQN LADFTLLLPQKLPAGDGALALGQAVIAAVQLSDARTIAKT >gi|316918029|gb|ADCU01000020.1| GENE 212 222420 - 224681 1979 753 aa, chain - ## HITS:1 COG:YPO0344 KEGG:ns NR:ns ## COG: YPO0344 COG0243 # Protein_GI_number: 16120679 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Yersinia pestis # 32 739 3 708 715 1071 69.0 0 MNSPIVNNQIVVNNLDVVNNNVAVNDVVGKSKVVTVCPYCGAGCKINLCIENGKIVRAEG ANGVTNQGELCLKGYFGWDFLNDTKLLTPRLNEPMIRREKGGKFEVVSWDEAIRYTAQRL KEIKQKYGAKSIMHTGSSRGTGNETNYVMQKFARAVTGNNNVDCCARVCHGPSVAGLQQT LGNGAMSNSISDIENSQCLLVFGYNCADSHPIVARRVIKAKEKGAKIIVCDPRKIETARI ADQHLQMKNGTNMALVNAFAHVLIEENLYDKSYVANFTEGFEEYRKIVADYSPEAVEKLV GIPAEDIRQAMRTYAAAPSATIMWGMGVTQFGQAVDVVKGLSGLALLTGNLGRPNVGVGP VRGQNNVQGACDMGVLPNEFPGYQSVTDPEIRAKFAKAWGINVEDMDPDVGYRITEVPHL ALEGKVKAYYIMGEDPLQTEADLGLVRKGFEALEFVVVQDIFMTKTAEQADVILPATSWG EHGGIFSCADRGFQRFGKAIEAKGNVKRDWEIISLLATEMGYPMYYNSNEEIWDELRELC PLYYGATYEKIGEMGHIQWPCPTLDHPGTPYLYKDNHFDTPTGKGQLFATAWRAPAEVPD ADYPLVLCTVREVGHYSCRSMTGNCVALQTLADEPGFVQIHPEDARRMGILDQQIIWVES RRGKVISRCNYNERINKGAIYMTYQWWIGACNELTQDNLDPVSKTPETKYCAVRVEPIID QDWAETYASQTYNEMKSRLRHHVEDAERRMAHA >gi|316918029|gb|ADCU01000020.1| GENE 213 224803 - 225348 397 181 aa, chain - ## HITS:1 COG:STM2843 KEGG:ns NR:ns ## COG: STM2843 COG1142 # Protein_GI_number: 16766149 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Salmonella typhimurium LT2 # 1 181 1 181 181 230 68.0 1e-60 MNRFVIADPKKCIGCRTCEVACVMAHREDSELHNLSKDNFTPRIHVIKGQNVSTAILCRQ CEDAPCANVCPNGAISRQKDFIYVSQEKCIGCKTCVVACPYGTMEVVTSPVVRQNGASAM MVSSKAEANKCDLCHTRENGPACVETCPTNALKLIDRNAMQDLINEKRRRAALDTTIDFM F >gi|316918029|gb|ADCU01000020.1| GENE 214 225757 - 226020 287 87 aa, chain - ## HITS:1 COG:RSp0765 KEGG:ns NR:ns ## COG: RSp0765 COG4104 # Protein_GI_number: 17548986 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 2 83 3 85 89 62 48.0 3e-10 MKPLIVLGDKTNHGGTVVTADAGFTQDGIAVAGHGDMVVCPILGHTPSTIIASGSGFTLN GKQAAHDGDQTSCGAKLIASHFTVKHG >gi|316918029|gb|ADCU01000020.1| GENE 215 226032 - 226922 415 296 aa, chain - ## HITS:1 COG:no KEGG:Pput_2114 NR:ns ## KEGG: Pput_2114 # Name: not_defined # Def: hypothetical protein # Organism: P.putida_F1 # Pathway: not_defined # 23 272 19 286 292 77 26.0 9e-13 MIKTSEVTYDFPERKYKVEDAWIGNQLISISDNCLEIQTATLAFESIMGRFWFQAMLFTA IYFSSGFSHFFVLVLIPIIIIMLFIGGKAIINIKENSNIVFNRSTRMVHAHHRGKDLSTQ WSSLLWDSQININNVAKIYFIFPHRNEDNTVSVDYVELSNDQRSVLHGVTTFINAFMQQG HEGLRVPKSYEWSRVFSTKVTLSPSEIWQHYAPWPFRRRYCDRVEMNTKIIFWPVWTFLL FPLLSLFALSWWLMCKVFKVSPAAVPYDAYQGDNSQRFTPQFAAKQIKPFEKYKTV >gi|316918029|gb|ADCU01000020.1| GENE 216 226942 - 227382 221 146 aa, chain - ## HITS:1 COG:no KEGG:Pput_2114 NR:ns ## KEGG: Pput_2114 # Name: not_defined # Def: hypothetical protein # Organism: P.putida_F1 # Pathway: not_defined # 22 129 183 286 292 62 33.0 4e-09 MHHRNANGISITRHIEIDDEWNVKLIIDYIKSFTSQGPNNLIIPTEYEWADREKINIAFS PLKALIHYAPWPFCGKITVPLEKALKIYMWPFYVLIYFPLNIMASFLWYPFTKIFNIKPH PVPEEAYEGDDSIRVTPEMAAKGIMP >gi|316918029|gb|ADCU01000020.1| GENE 217 227793 - 228155 117 120 aa, chain - ## HITS:1 COG:no KEGG:Pput_2114 NR:ns ## KEGG: Pput_2114 # Name: not_defined # Def: hypothetical protein # Organism: P.putida_F1 # Pathway: not_defined # 3 103 190 286 292 63 34.0 3e-09 MNYINNFIRNGHSELPIPTKLAWTDIGCSNVSISPCKALRHYAPWPFCSKITDPEENALK IYMWPLYTFIMFPINMFFALLWYLFTKIFNIKPHPVPEEAYEGDDSIRVTPEMAAKGIRP >gi|316918029|gb|ADCU01000020.1| GENE 218 228662 - 231550 834 962 aa, chain - ## HITS:1 COG:no KEGG:Pput_2115 NR:ns ## KEGG: Pput_2115 # Name: not_defined # Def: hypothetical protein # Organism: P.putida_F1 # Pathway: not_defined # 2 940 4 991 996 422 30.0 1e-116 MATTDNVVSAKPCTSAKGRIPLVPVRYGIVPKKPDDPQQFAWEGCGFTLEEGFTCIAELH CSKYTLRALRGGYVYTYMSSPEKGKKLIIHEHEGNGLYQELLIQNLEQYGSTNSYASGNI SHNIWIEADATEVWVGYSPHLWTQKQVSDILSSIASRQLFMQPVDPAELVNCSESFSTQK NIMPLAALEQWVEEYKPADIRIDMSWSQGECYQTDLYTLKSMAGYFKQYAPKVPAVIALL DAEGIGIDTGSIAKLYAHQTADVKAQGSGSNLPLALQLNVSKLQRPSEDFYQKNAISELI FNTLISLSASKGDESLVDGERDLSHYMLLTDESRSKGGHRFAKRIDQQKFMAFLEEKKQV QDDLEIMIKRARLSAIDHHAWLKSTEQQYQYMRLSIACALSSYDRYFKASAYSLELSIAM IIDGAGFPLPGQEDKDPRSTLFMDWINDANSPLNQALLAYRPFEKDASTAGVWVSAPDLI IQTISKKLSFIKATQGTDIIAKNIQTTLLKLTKGRKSWDKIASLTKHVEQAIEENNATKL LGVLRSRYNITSDVIEAVPAIKNLEVLTESNMLAISESTKASIFSGPNRRNLKVITETEI RAKYNENYVAGKRSALFSVAIVSPGVLIFASIYLFSALKTCQEKPTAINISSFMAAGLGE LATINAALVSVKNLAVRESLDAGIAVAGEYYVKLIPRLLASDVAGLTFGWGAIIFTFITD ILKSIKNQTDGKYFRLGSAFLMLFGSALLLHIGGLISTMALIPIIGWVILGITLIGVGIW LGLEADERNHTPYEAWVNRTEFGILMADENSDRDLHRWGSLSETLQEYFNIRYKPIMVDA TLAQYLKHPTVYSQWLPEEIISNKFGMQPPKFVLYFPDYIKGISDIRDISTGYLIEEAPQ TNGGILLRFSKNDSSPNGGQARLDLKYQPNTGDTNEMVIISENKMDPELYMRSIPSITYY RP >gi|316918029|gb|ADCU01000020.1| GENE 219 231537 - 232751 464 404 aa, chain - ## HITS:1 COG:no KEGG:PputGB1_3235 NR:ns ## KEGG: PputGB1_3235 # Name: not_defined # Def: hypothetical protein # Organism: P.putida_GB1 # Pathway: not_defined # 29 307 20 304 310 79 22.0 2e-13 MSLRTNKRETSNALNTQELKATLCGYPVYLLLQPRIIEHLTYNGLQKHDDVFPPAPSLIE IIKQSDPYILYHWIWEDTRYDREREKGPLLIEVTENTATLEQFIALWGQHHAGLIVHSAN PIDELVSHLAAVSTLVMSNGHCVRFNWLPNSLDDILSAMTAKKRDRLIGPLQNVYYYHSG NSQYPWRKYQSQYRETLFTPVLKLTSREIKRISLAKHQKSDALLARELLICSDSAEEHYP RALQLVKTCQHQLQKFNIQRQEHVQRFIHTFFAHMIQMNHERSVCVLANLQQPVVDRLDA LDYLIHNPLGYFTSEYFYHLLMSDWLLIPENKQRYFYDATNAVLTTYRPPEQNVSESQIR EQFLQSYGTSIQLAKHIVQNNLPPLSVRREAQRLLSGDLFYGNH >gi|316918029|gb|ADCU01000020.1| GENE 220 232755 - 234845 1087 696 aa, chain - ## HITS:1 COG:YPO0764 KEGG:ns NR:ns ## COG: YPO0764 COG3501 # Protein_GI_number: 16121079 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 5 588 34 641 741 439 38.0 1e-123 MKRKTGLFFTCKIGGLAAETFDVAEFHLNEELCALFTLTLTLVSPRNDIDLDQQLLQQAS LTINVDNEEQRTITGVVASAERGDSGFRRTFYYLTIRPEMWAMTLNQDSRIYQLQSVPDI LRALLQKNNVQSNCTQLQDTHQTREYVTQKRESDFDFFHRLSSEEGIMYWFDNKGLCYSD THLGMLVATSLTYNPHPKSAIQGDIIHSLRFGAHMHPEQTIHKDRNYHRPSYALKQQAST RSGGHYSVFESYGRFQQDAEAAPLVRYRMEQLQANAQMGTAHSNCIKLMPGRIFTIIEHP VESMNDRWQIVAIDHHGKMPEALEEEDNGGGTTLTNQFTFVPGRNDWRPAYRYRPQADGD EVATVVGPSGEEIYVNEDGCIRVYFHWDRYNNADEKASCWIRVAQGWNGNGFGMMAIPRV GQEVIVSYLNGDIDRPIVTGCTYNGKNRPPYPLPGNKTKMVLRSKTYKGGGYNELSFEDA TDNEQVYIRAQKNQLNTVNNDETTQIGHDRSETVGNDEVVNVNHDRKNITGHDETWEVGN DRRTTITHDDYLVVTRNQKIEINKDYIANIGNHRKEQVTANYQIDTGGNYTHRVVGESLH DASKKLQQKSPQILHDASEKIVLRGPAGKITLDAKGITLEGNIFLKGLVAATMGAAPSFS GAPSQSPEEGKPFDDMCSMQPDGSCPLDDCPCEKEK >gi|316918029|gb|ADCU01000020.1| GENE 221 234855 - 235343 156 162 aa, chain - ## HITS:1 COG:ECs0229 KEGG:ns NR:ns ## COG: ECs0229 COG3519 # Protein_GI_number: 15829483 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 11 162 465 616 616 100 36.0 1e-21 MTGEEIPNELSVTNITPCSQGYSGITDSHQHWRLLSLLSFNYLVLKDTSHLKDLLRQFDF HQQSNLTQSEFIQRSIEGITSAVTKPMDWLVKGSPNRGVSVTLTLNPDCYANVGEMYQFA VSLSYVLSVSQNTNSFIHLDVINQRTNERWHIGHVQGHHPML >gi|316918029|gb|ADCU01000020.1| GENE 222 236868 - 238544 1616 558 aa, chain - ## HITS:1 COG:fdhF KEGG:ns NR:ns ## COG: fdhF COG0243 # Protein_GI_number: 16131905 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 556 157 713 715 874 73.0 0 MSNSIVEIEDTQCIFVFGYNAADSHPIVARRIIKAKAKGAKIIVCDPRFIETARIADIHV PLKNGSNIALLNALAHVIIEENLHDREFIEQHTEEFETFRDLVMPYTPESVEEITGISAQ MIRETARMYAKAPTATILWGMGVTQFYQGVETVRTLTSLALLTGNLGKAHVGVGPVRGQN NVQGACDMGALPNTYPGYQYVTDEAAREKFAKAWGVPSLPANIGHALSEVPHNIDHGLIK AHYVMGEDPLQTEPDLATIRRTFEKLDILIVQDIFMTKTAAIADVVLPATSWGEHEGVYT AADRGFQRFYKAVEPEGDVKRDWEIISLMSTAMGYPMHYNNTQEIWDELRELCPIYYGAT YEKMADLAYIQWPCPTLDSPGTSYLYEGGNFDTPNGKGQFYTCEWRPPIDKVSDEFPMVL ATVREVGHYSCRSMTGNCKALAALADEPGYIQINTADAERFGIRDQELVWVRSRQGKVIT RAAVSDRPNKGAVYMTYQWWIGACNELVAENLSPITKTPEYKYCAVSVDAIKDQEEAEQY VVREYDNIKRRLRVAAEG >gi|316918029|gb|ADCU01000020.1| GENE 223 238593 - 239012 394 139 aa, chain - ## HITS:1 COG:ECs5061 KEGG:ns NR:ns ## COG: ECs5061 COG0243 # Protein_GI_number: 15834315 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 139 1 139 715 256 82.0 8e-69 MKKVITVCPYCASGCKINLVVDNGRIIRAEGANGVTNQGELCLKGYYGWDFIHDTKILTP RLKSPMIRRERGGKLENVSWEEAIEFASSRLLAVKEKYGPDAIMTTGSSRGPGNETNYVM QKFARAAIGTNNVDCCARV >gi|316918029|gb|ADCU01000020.1| GENE 224 239933 - 240460 593 175 aa, chain - ## HITS:1 COG:ECs3573 KEGG:ns NR:ns ## COG: ECs3573 COG0680 # Protein_GI_number: 15832827 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 14 168 3 156 156 209 66.0 2e-54 MANSLQENIRPVKNLLLCVGNSMMGDDGAGPLLAEKVTAHPVEGWAVIDGGTSPESYSHA IREMKPERLIIVDATEMGLEPGEIRIIDEKDIAELFIVTTHNLPLSYLIEQLREDVPDIT FVGIQPAIVAFYAPMMQPVKDAVDTVYQRLSHWGEQGGFELLVACEDEFGVSSQS >gi|316918029|gb|ADCU01000020.1| GENE 225 240453 - 240908 430 151 aa, chain - ## HITS:1 COG:no KEGG:NT01EI_3276 NR:ns ## KEGG: NT01EI_3276 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 14 151 11 147 147 186 66.0 2e-46 MSDHAHHQPYHEQDPMVVFYSLSRKFVQKKEDEDRTPQEAKEVIYYSLAIGHHLGVIDCL KTCLECPLSGYRAWVAKLPEESTARRKLEGLPRYGEICIDSTHTHMLACALDKARPQMNE QEQTWTDALIAALQMIENEPAIYLMVKRRDG >gi|316918029|gb|ADCU01000020.1| GENE 226 240908 - 241732 781 274 aa, chain - ## HITS:1 COG:STM2847 KEGG:ns NR:ns ## COG: STM2847 COG3260 # Protein_GI_number: 16766153 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III small subunit # Organism: Salmonella typhimurium LT2 # 13 268 2 252 255 385 71.0 1e-107 MSQIITQQPVNNSPIIGPRDANGLPVPITVDEQIAKLKSTLLKDIRRSAYVYRVDCGGCN GCEIEIFSALTPLFDTERFGIKVVPSPRHADILLFTGAVTRSMRIPAIRAYESAPDPKIV ISYGACGCSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATIYGFAMALGLLDQKLKG EHHQQSEDEQATILHPAIPQQLRVMIDREARRMSGYRYGRQIADKFMDLLAQQNDLTVEA RVAQFLAHENDPRLTEIISRLQAVCHDAARGGNV >gi|316918029|gb|ADCU01000020.1| GENE 227 241729 - 242286 439 185 aa, chain - ## HITS:1 COG:STM2848 KEGG:ns NR:ns ## COG: STM2848 COG1143 # Protein_GI_number: 16766154 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Salmonella typhimurium LT2 # 1 181 1 178 180 196 54.0 2e-50 MLKLLKTAFKHRDATVAYPAKPMQVDPNFRGKPEYNPEQCIACGACTAACPANALTMETN AREGTRTWSLHLGRCIFCARCEEVCPTAAIKLTPEFELAVWNKNDLFQTAEFKVCNCVEC GAPYAAQKEIDYAMALLVQAGNLTEEQAEERRPQFETCPNCKRKHNITHSARITLGRHLT QEAAQ >gi|316918029|gb|ADCU01000020.1| GENE 228 242303 - 244006 1856 567 aa, chain - ## HITS:1 COG:ECs3577_2 KEGG:ns NR:ns ## COG: ECs3577_2 COG3261 # Protein_GI_number: 15832831 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III large subunit # Organism: Escherichia coli O157:H7 # 158 567 1 412 412 783 87.0 0 MNQQKTGQHYIQELRQQFPTAILDESWQTDTQATITIKTNMLPEVVEFLYYKQGGWLSVL FGNDERPLCGSYAVYYVLSMETGTKCWITVKALVDERTLEFPSVTPRVPAAVWGEREVRD MYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPAPTTDVETYPFINESKSGKIV PIGPLHITSDEPGHFRLFVDGEDIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCG ICGFAHSTAYTTSVENAMGIQVPERAQAIRSILLEVERLHSHLLNLGLSCHFVGFDSGFM QFFRVREKSMKMAEILTGARKTYGLNLIGGIRRDLLKDDMIKTRILAAEMRAEVKTLVDI LFSTPNMEQRTVGVGRLDPQIARDFSNVGPMIRASGHARDTRVDHPFAGYDLLPMEIHTE TGCDVISRVKVRVNEVFTALNMIDFGLDNLPGGPLSVEGFTYIPNRFALGFSEAPRGDDI HWSMTGDNQKLYRWRCRAATYSNWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDRVTLVD VRKRKSVTVPYKEIERYGLERKDSPLK >gi|316918029|gb|ADCU01000020.1| GENE 229 244080 - 245015 1026 311 aa, chain - ## HITS:1 COG:STM2850 KEGG:ns NR:ns ## COG: STM2850 COG0650 # Protein_GI_number: 16766156 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 4 # Organism: Salmonella typhimurium LT2 # 11 311 7 307 307 369 70.0 1e-102 MSSLSILVLALIQALALLALAPLFSGISRVLRAKIHSRKGPDIFQDYRDIFKLFKRQNIS PAASGVFFQMMPYVMVGTMLTIATALPVVTVISPLAPIGDLITVVYLFAVARFFFAIAGL DTGSTFTGIGASRESMLGILVEPILMLGLWVTALLAGSTNLGVMSFHVLEWNVNSSLALV LALLACAFATFIEMGKLPFDMAEAEQELQEGPLTEYSGSAFAVLKLGISLKQLVVLQLFI GVFVPWGQMTTFSAGALVLAIVAAIIKLLVGIALIALFENSVARLRFLKTSYTTWAGFGL AAAAFLSWLIA >gi|316918029|gb|ADCU01000020.1| GENE 230 245026 - 246933 1573 635 aa, chain - ## HITS:1 COG:hycC KEGG:ns NR:ns ## COG: hycC COG0651 # Protein_GI_number: 16130630 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli K12 # 1 635 1 605 608 404 42.0 1e-112 MNTVELLSFALSIYLISALLSLVLGSTGSGWLGARVAALGAFVAGAAGTWSACQGLTFTP EIVSANVFNHTPVLFNTLNSLMLLLTSVVSLLCAIYAFSYLKSYIPKKAALIGCLMNMLS AAISLLVLTDNAVMFVALLELMTLFTALLVWQAQDAKARKAASLYWLMSRLGTVFIIAAF WILYRHSGTLALSEFHLATLSRGLASWVFVLGLLGFGIVSGLVPLHGWIPQVHSSAPSHA ATLVSSVMLKVGLFGLLKLSIDWLGMPQLWWGAALMIIGALTAFIGGLYALMEHDIKRLL AYHTVENIGIILLGLSACVLGLALGKPTLAVLGLMAGLFHLVNHTLFKGVLFLGAGAVIR STGTKDIEKLGGVARRMPLTATAMLIGLMSMAALPPLNGFVSEWFTYQTLFSLSHSSTLS MRIIAPLVMVVLAITGALAVMCVAKIFGVTFLGAPRSEGAANAGCAPASMLFSPVLLAIG CLAFGIGAPWVLPYMLKIAAGSLGLMLDPHQMTQGAVMISGTTNTTLLSTLMIAILLLAF PIIPLLLVGMYKNARLPRRRHGDAWACGYGHEAGMVVTATGFAQPLRVMFAPVYRLRQVF NPAPLFGGLLREGAMRIYPALAVIELALLLVAIFA >gi|316918029|gb|ADCU01000020.1| GENE 231 246930 - 247463 266 177 aa, chain - ## HITS:1 COG:ECs3580 KEGG:ns NR:ns ## COG: ECs3580 COG1142 # Protein_GI_number: 15832834 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli O157:H7 # 2 173 29 200 203 194 61.0 1e-49 MYGLQTEPRLVVVKNSRDSVPVMCHQCEDAPCAQVCPVNAITHTNDSIQLNESLCVSCKL CGIACPFGAITMNGSKPLHIPANSNTPMALPAPPNKRGISPFLDWYPGIRSIAVKCDLCQ FSEQGPACVRACPTHAIMLVDDNQLALASAAKRQNAMDAMDADLMMFSSFAEGSDAQ >gi|316918029|gb|ADCU01000020.1| GENE 232 247877 - 248734 281 285 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGFPIIAQINAIAQLNENEDLSEHCYNLFQSFCDQTFWILGEHKPISNGKSEFSGIFHIL PETGDKIIYSYLSVDENTQPEYLPAIQESDNSAQWTPVNGFVILKLATMERFALVATENS DNYAILEHGQIMSLIVTAKEKNEKIELNQPQKTITVLDMPRDFCRQLYLYCRGQKEIYTC RLALANVTESTSGLDNFTLLMLLDCGDKERTHKHFAEIKKNYMSLLPMNIELIFLTADNS PRFNKLAKLIHDAKPFYSKQDSQGFFAKLKRRLRHPLPIALVFKE >gi|316918029|gb|ADCU01000020.1| GENE 233 248818 - 249816 757 332 aa, chain - ## HITS:1 COG:STM3012 KEGG:ns NR:ns ## COG: STM3012 COG1609 # Protein_GI_number: 16766314 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 329 2 331 340 413 63.0 1e-115 MITMLDVSLRAGVSKATVSRVLNGTGQVKESTRIAVFKAVEELGYRPNLLAQALANQTSN TIGLVVSNFDGPYFGRLLRQAAHLIEASGKHMIVTDGHDTPEGEREAVHLLIDRRCDAII LYTRFMEEPALMQLISQHHALMVINRDLPQARDRCVFFEQQQAASEVVKYLITQGHRQIA CITAPINTPTAQSRLAGYKDALEQNQITYHDSLVTLGDSSVAGGYHACCELLARQQPFTA LFACNDDMAVGALRALHQAGKRVPEDVSLFGFDDEPSAEYLQPSLSTVYLPIDKMISTAI TQALRLSSGEIVEPVEPFVGELKVRESVAKIK >gi|316918029|gb|ADCU01000020.1| GENE 234 249856 - 250863 774 335 aa, chain - ## HITS:1 COG:YPO0795 KEGG:ns NR:ns ## COG: YPO0795 COG1609 # Protein_GI_number: 16121107 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 332 1 332 340 548 84.0 1e-156 MATIKDVARLAGVSVATVSRVINNSPKASDSSRAAVMSAMEQLQYHPNANARALAQQATE TIGLIVSDVSDPFFGAMVKAVEQVAYATGNFLLIGNGYHNIDKERQAIEQLIRHRCAALV VHSKMIPDEELAHLMKQIPGMVLINRTLPGFETRCVALDDRYGAWLATRHLIQQGHKHIA CICSNHPISDAHDRLQGYLDALHEHGIPVDDKLIAYGSPDEIGGEQAMTELLGHGKTLTA VTCYNDPMAAGALSVLSDNSIDVPGKISLIGFDDVLISRYLRPRLTTIRYPVVAMATQAA ELALALSKQLPLPETTNMFSPTLVCRHSVSTPRLV >gi|316918029|gb|ADCU01000020.1| GENE 235 251611 - 253779 1704 722 aa, chain + ## HITS:1 COG:YPO0793_2 KEGG:ns NR:ns ## COG: YPO0793_2 COG0318 # Protein_GI_number: 16121105 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Yersinia pestis # 198 717 1 520 521 854 79.0 0 MIYRFFSALFRFLFRIKITGLEHSFKHDKLLITPNHVSFLDGALMALYLPVRPVFAVYSS IADSRYMRFISKYVDIVALDPTKPMAIKHLIRMVEQGRPVVIFPEGRITVTGSMMKIYDG AAFVAARSGAAIIPVRIEGAEFTPFGRLRGLFKVRWFPQISINILPPTHLAMPDAPRARE RRVLAGERLHDIMMKARMDSQPRHTLYQAYLAAMTRYGASKPIIEDIAFKEDSYRSLLKK SLGVSRILERFTAPGEHVGMLLPNATITAAAIIGATLRNRVPALLNYTAGVNGVKNAMLA ANIKTIVTSRQFLEKGKLTHLPEQVVEANWVYLEDLKDTVTRDDKIWIIKHLMCPAKAML PQKPDDAALILFTSGSEGYPKGVVHSHASLLANVEQIRTVADFTPADRFMSALPLFHAFG LTVGLLTPLMTGSRVFLYPSPLHYRVVPELVYDRNCTVLFGTSTFLGNYARFAHPYDFAR LRYVVAGAEKLSPNTAQIWQDKFGIRILEGYGVTECAPVVAINVPMSTKVGSVGRILPSM EARLIKMTGIEQGGRLQLRGPNIMKGYLRVENPGVLEMPQAENADGVMEAGWYDTGDIVT LDDKGYCVIRGRVKRFAKLAGEMVSLESVEQLALKISPDHEHAASSRSDSSKGEALVLFT TDPELSRDRLLKQARESGVPELAVPRDIRFLKPLPLLGSGKVDFVTLRQLAENKETADGE TV >gi|316918029|gb|ADCU01000020.1| GENE 236 253776 - 254984 1143 402 aa, chain + ## HITS:1 COG:YPO0792 KEGG:ns NR:ns ## COG: YPO0792 COG0477 # Protein_GI_number: 16121104 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 393 1 393 406 496 75.0 1e-140 MTDAAHSTGPLLNRSMKAVILAQFFSAFGDNALLFATLAVIKQQLYPDWSQPVLQMAFVA TYIVLAPFVGQFADSFSKGQVMMVANSLKLLGALAICFGFNPFLGYALVGIGAAAYSPAK YGILGEITSGDQLVKANGLMEASTIVAILIGSVAGGMMADLNVIAALALCVLVYGAAVVA NGFIPKLTPAHPARSWNPVRMVSIFGDACRVLWSNQEARFSLIGTSLFWGAGVTLRFLLV LWVPVVLNITDNTTPTLLNAMVAVGIVIGAGAAAKLVTLTTVKRCLPAGVLIGVVVAWFA MQSSPSLSYVLLVLVGICGGFFVVPLNALLQERGKHTVGAGNAIAVQNLGENTAMLLMLG LYSLVVKVGVPVVGIGVGFGVVFALAIVGVWGWDVVRRKRSA >gi|316918029|gb|ADCU01000020.1| GENE 237 255034 - 256074 994 346 aa, chain - ## HITS:1 COG:YPO0790 KEGG:ns NR:ns ## COG: YPO0790 COG0667 # Protein_GI_number: 16121102 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Yersinia pestis # 1 346 1 346 346 584 83.0 1e-167 MQYHRIPHSSLEVSELGLGTMTFGEQNSEADAHAQLDLAIASGINLIDTAEMYPVPPRPE TQGLTESYIGSWLAKRGNREKIVLATKITGPVRNNDSGIRPDQALDRKNIRAALDDSLKR LNTDYIDLYQLHWPQRPTNCFGQLGYRYTEQKPVVTILETLEALSEQVRAGKIRYIGVSN ETPWGVMRYLQLAEKHDLPRIVSIQNPYSLLNRSFEVGLAEISQYEGVELLAYSCLGFGT LSGKYLNGAKPATARNTLFSRFTRYTSKQTEAAVAEYVQLAKKHALDPAQMALAFVRQQP FVASTLLGATTLEQLKSNIESRNLVLDEEVLKAIEEIHGRFTYPAP >gi|316918029|gb|ADCU01000020.1| GENE 238 256501 - 257922 1227 473 aa, chain + ## HITS:1 COG:ECs0433 KEGG:ns NR:ns ## COG: ECs0433 COG1785 # Protein_GI_number: 15829687 # Func_class: P Inorganic ion transport and metabolism # Function: Alkaline phosphatase # Organism: Escherichia coli O157:H7 # 15 473 36 494 494 685 78.0 0 MASKKIFPLSLVSLMMLMPPSHAANPPIADLSARAAQGDITQFGGARRMTQDQTTALIAS LSNKTAKNVILLIGDGMGDSEITSARNYAEGAGGQFKGIDALPLTGQYTHYSLNKKTHKP DYVTDSAASATAWSTGVKTYNGALGVDVNGKSHRTLLEIAKAAGKATGNVSTAELQDATP AAQASHVTSRKCYGPSKTLELCPGNALENGGEGSITEQLLKTRADVTLGGGAKTFSETVN AGDWKGKTLMQQAEGSGYQVVTDLDGLNKISVANQQKPVLGLFADGNMPVRWQGPKATYH GNLDNPPVSCTVNPERSASTPTLAQMTEKAISLLEKNKNGFFLQVEGASIDKQDHAANPC GQFGETVDLDEAVQKALDFARKDGNTLVIVTADHAHSSQIIAPESKAPGLTQALTTKDGA IMAISYGNSEEESQEHTGSQLRIAAYGPHAGNVVGLTDQTDLFFTMRDAMGLK >gi|316918029|gb|ADCU01000020.1| GENE 239 258132 - 258962 483 276 aa, chain + ## HITS:1 COG:no KEGG:ETAE_2886 NR:ns ## KEGG: ETAE_2886 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 13 273 15 278 280 259 51.0 7e-68 MKENSPVDGKAYIEGDVEEHLRFYRLCGIMAAATAVFITLLMVLLFPESMYEESYRIACI VFGPVTLVLILGMFKYPVACSWILFVTFHSMLLYAFFDGTTFNLVISTLFSLFFLLGAVA MTQFSFGAVRPLWLAQRGWKPITSLCLLSVLVTLISSGYALRWIELKKEDPLQWIEYRRE MLNRYVNAAPQDDLQDSTFKLRRVRLEGKTLVFVFRVLPQQDQIVEVALAEHTKEHFASH CREKGIREYNMKVMYVYHVGQLEHIFVRDKKDCDKT >gi|316918029|gb|ADCU01000020.1| GENE 240 259026 - 259742 780 238 aa, chain - ## HITS:1 COG:STM3006 KEGG:ns NR:ns ## COG: STM3006 COG0861 # Protein_GI_number: 16766308 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Salmonella typhimurium LT2 # 1 233 2 234 237 317 83.0 1e-86 MFEWIVDPNAWLALGTLTILEIVLGIDNIIFLSLVVAKLPKAQQNKARRIGLLAAMGMRL CLLASIAWVIRLTHPLFTLLDHPVSTRDLILLLGGLFLIYKAIKEIHETIEGGGEDMTSN VHSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARPIGEFVAR HPSVKMLALSFLILVGFTLILESFGIHVPKGYIYFAMFFSMTVEALNLLRSKKEKTSE >gi|316918029|gb|ADCU01000020.1| GENE 241 259844 - 260530 616 228 aa, chain - ## HITS:1 COG:YPO0789 KEGG:ns NR:ns ## COG: YPO0789 COG3066 # Protein_GI_number: 16121101 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair protein # Organism: Yersinia pestis # 1 228 1 228 228 346 76.0 2e-95 MTTPQLPTAAPENVQQLLNRAQSLAGYTLGELASKAAVAIPRDLKRDKGWVGMLLELYLG ASAGSKPEQDFPEIGVELKTIPIDRSGKPLETTFVCVAPLTGNSGITWESSHVRHKLQRV LWIPVEGERQIPLEQRRVGSPLLWTPSAEEDEQLKRDWEELMDMIVLGKVERITARHGEV LQIRPKAANSRALTEATGEHGEPIHTLPRGFYLKKNFTAALLARHFLL >gi|316918029|gb|ADCU01000020.1| GENE 242 261243 - 261776 359 177 aa, chain + ## HITS:1 COG:YPO0786 KEGG:ns NR:ns ## COG: YPO0786 COG0494 # Protein_GI_number: 16121098 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Yersinia pestis # 1 177 1 175 175 310 89.0 1e-84 MIDDDGYRPNVGIVICNRQGQVLWARRFGQNSWQFPQGGINPGETAEQAMYRELFEEVGL GRKDVKILASTRNWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLMCNESEINMQRSSTPE FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFSPVVMPLQEVTPPTARTSPAYRRKRG >gi|316918029|gb|ADCU01000020.1| GENE 243 261789 - 264035 1930 748 aa, chain + ## HITS:1 COG:YPO0785 KEGG:ns NR:ns ## COG: YPO0785 COG3605 # Protein_GI_number: 16121097 # Func_class: T Signal transduction mechanisms # Function: Signal transduction protein containing GAF and PtsI domains # Organism: Yersinia pestis # 1 736 1 736 748 1185 82.0 0 MLTRLREIVEKVAAAASLTDALEVLVNETCQAMDTEVCSIYLADNDRQCYYLMATRGLKK PRGRVVTLAFDEGIVGLVGRLAEPINLADAPSHPSFKYVPKVKEERYRAFLGVPIIYRRQ LLGVLAVQQRESRQFNETEESFLVTLATQLAGILSQAQLNGLFGRLRQNRIRAIAASPGI AVGEGWMDVSQPSLEQVFQASTLDSASERERMTQALEDASAEFRRFSKRFTANSQKDSAA IFDLYSHLINDARLKRELMNEIDAGSVAEWAVKQVIERFAEQFANLQDPYMRERASDLRA LGQRLLFHLDDNATGINQWPERFILVADELTATILAEVPQERMLGVVVRDGAANSHAAIL VRAMGVPTVMGADIQPTLLHERQLIVDGYRGEVLVAPDPVLVHEYQRLVNEEIVLSKMAE DDAEKPAQLKSGERVQVMLNAGLSAEHEQRQDSRVDGVGLYRTEIPFMLQSGFPSEEEQV AQYQGMLQINPNKPVTLRTLDIGADKQLPYMPISEENPSLGWRGIRITLDQPEIFLVQVR AMLRANAASGNLNILLPMVTSLSEVDEAKRLIERAGREVEEMIGYALPKPRIGVMLEVPS LIFLLPFLAERVDFISVGTNDLTQYLLAVDRNNTRVASLYDSLHPAMLRVLQQVVQECDR LNLPISVCGEMAGDPMGALLLVGMGYRNLSMNGHSVPRIKYLLRTIELEDASFLAQRVLE SQMSTEVRHLTAAFMERRGLGGLIRGGL >gi|316918029|gb|ADCU01000020.1| GENE 244 264212 - 264556 264 114 aa, chain + ## HITS:1 COG:YPO3362 KEGG:ns NR:ns ## COG: YPO3362 COG2919 # Protein_GI_number: 16123512 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Yersinia pestis # 16 101 16 101 106 149 86.0 2e-36 MGKLTLLLLILLGWLQYSLWIGKNGIHDYVRVKEDVAAQQANNGKLKSRNDQLFAEIDDL NGGQEAIEERARNELGMIKPGETFYRLVPDQSKRNGGTTQSSPMPSSSSSTARN >gi|316918029|gb|ADCU01000020.1| GENE 245 264686 - 265393 295 235 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 14 235 6 227 234 118 34 3e-25 MSAPDESPLFSVVAVVPAAGVGSRMRSTCPKQYLSIDGKTILEHSVAALLRHADVERVVV SISPDDGYFYNLPLANDPRVQVVYGGAQRADSVFAGLQAATDAHWVLVHDAARPCLHQDD LSNLLALRHTSKVGGILAAPVRDTMKRAEAGINSIAHTVDREALWHALTPQLFPRELLMM CLARALNEGANVTDEASALEYCGYHPLLVSGRSDNIKVTRPEDFALAQFYLSQRT >gi|316918029|gb|ADCU01000020.1| GENE 246 265467 - 265940 572 157 aa, chain + ## HITS:1 COG:YPO3360 KEGG:ns NR:ns ## COG: YPO3360 COG0245 # Protein_GI_number: 16123510 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Yersinia pestis # 1 155 1 157 162 280 92.0 5e-76 MRIGHGFDVHKFGGEGPLIIGGVRIPYEFGLLAHSDGDVALHAATDALLGAAALGDIGKL FPDTDPAFKGADSRALLREAYRRIRAKGYRLGNLDITIIAQAPKMAPHIPQMRVNLAEDL ECHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKE >gi|316918029|gb|ADCU01000020.1| GENE 247 265944 - 266990 918 348 aa, chain + ## HITS:1 COG:YPO3359 KEGG:ns NR:ns ## COG: YPO3359 COG0585 # Protein_GI_number: 16123509 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 343 1 343 349 488 69.0 1e-138 MDFDALHYLHGRPQGTGVLKAFPEDFFVSEDLGFEPDGEGEHLLVRIRKEGCNTQFVADN LARFAKIPQRSVSYAGLKDRHAVTEQWFCLHLPGKESPDLSQFILEGCQVVRSARHLRKL RIGTLKGNTFRLVLRHITDRDDVEQRLQAIATEGAPNYFGAQRFGRGGNNLIQAAKWSRG EIQVRERAKRSFYLSAARSAMFNQITNMRLAQDLQRQVMLGDAMQLTGRGSWFVANAEEL ESLQQRTDGGELQITAALPGDNDLGTRDLAAQFEQQAIADYADLLALVKRERVESARRAM LVKPQEMSWSWWDDATVEVEFALPAGCFATSIVRELFNQENPNADLAE >gi|316918029|gb|ADCU01000020.1| GENE 248 266971 - 267732 552 253 aa, chain + ## HITS:1 COG:YPO3358 KEGG:ns NR:ns ## COG: YPO3358 COG0496 # Protein_GI_number: 16123508 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Yersinia pestis # 1 253 2 254 254 418 80.0 1e-117 MRILLSNDDGVMAPGIQTLAAALREFAQVQVVAPNRNRSASSNSLTLESPLRIETLTNGD ISVIDGTPTDCVYLGVNALMRPHPEIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPA LAVSLDGFQHYDTAAQVTCRLLKALAQYPLRTGRILNVNVPDLPLEQVKGIKVTRCGSRH PADKVIHQQDPRGRDLYWIGPPGEKQDAGPDTDFAAVEQGYVSITPLQVDLTAYHAQDLL SSWLEQTKVGEEW >gi|316918029|gb|ADCU01000020.1| GENE 249 267726 - 268358 549 210 aa, chain + ## HITS:1 COG:YPO3357 KEGG:ns NR:ns ## COG: YPO3357 COG2518 # Protein_GI_number: 16123507 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-L-isoaspartate carboxylmethyltransferase # Organism: Yersinia pestis # 1 210 1 208 208 311 75.0 5e-85 MVDRRVLTLLQQLMQQGIGDERVLKALAEVPREKFIDEAMSHKAYDNTALPIGLGQTISQ PYMVARMTELLRVGPEAKVLEIGTGSGYQTAVLAHLVQHVFSVERIKSLQWQAKRRLKQL DLHNVSTRHGDGWQGWASRGPFDAIIVTAAPPEIPEALLAQLADGGRLVLPVGEFDKTQH LRYVQRRGHDFLVESIEPVRFVPLVQGELA >gi|316918029|gb|ADCU01000020.1| GENE 250 268843 - 269832 452 329 aa, chain + ## HITS:1 COG:YPO3356 KEGG:ns NR:ns ## COG: YPO3356 COG0739 # Protein_GI_number: 16123506 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Yersinia pestis # 2 329 4 333 333 398 72.0 1e-111 MGSTMMKWRQVAACTLITLWLAGCTSDNSSAPISSVNGGGNDRMLSNAGNNNGGAQTGDG GRIIYNRSYQNIPKGSYNGGTYTVKRGDTLFYIAWISGNDFRDLAEKNNIPAPYSLNVGQ TIKLDANSNSGGMLAANDGTSGVPTQPSSGQIKSTGVDSQSTTAYSDNSGKQNVGKMLPA STATATTTAAATVPNSSASSVSSSAPVGTWRWPTDGKIIDNFSSAEGGNKGVDIAGSRGQ SVVATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMG STGTSSVRLHFEIRYKGKSVNPLRYLPQR >gi|316918029|gb|ADCU01000020.1| GENE 251 269885 - 270871 1070 328 aa, chain + ## HITS:1 COG:rpoS KEGG:ns NR:ns ## COG: rpoS COG0568 # Protein_GI_number: 16130648 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli K12 # 1 328 1 330 330 515 90.0 1e-146 MSQNTLKVNELNEEVDFDENGEEAFDEKVLVEEPTEVDSSDELMAQAVSQRVLDATQLYL GEIGYSPLLTAEEEVFFARRALRGDDASRRRMIESNLRLVVKIARRYSNRGLALLDLIEE GNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTA RELSHKLDHEPSAEEIAEQLDRPVTDVSRMLRLNERITSVDTPLGGDSEKALLDILTDEN ESGPEDTTQSDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERV RQIQVEGLRRLREILQAQGLSIEALFRE >gi|316918029|gb|ADCU01000020.1| GENE 252 270976 - 273498 2447 840 aa, chain - ## HITS:1 COG:YPO3354 KEGG:ns NR:ns ## COG: YPO3354 COG0249 # Protein_GI_number: 16123504 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Yersinia pestis # 1 840 13 851 851 1427 86.0 0 MMQQYLKLKAQHPDILLFYRMGDFYELFYDDAKRASQLMDISLTKRGASAGEPIPMAGIP HHAVENYLAKLVQLGESVAICEQIGDPATTKGPVERKVVRIVTPGTISDEALLKERQDNL LAAIWQDARGFGFATLDISSGRFRVAEPADLETMAAELQRTNPAELLYPEDFASMALIEN RRGLRRRPLWEFELDTARQQLNLQFGTRDLNGFGVEQATQALRAAGCLLQYVKDTQRTTL PHIRGITIERQQDGIIMDAATRRNLELTQNLSGGVENTLAAILDCTVTPMGSRMLKRWVH MPSRDHKALNNRQQAIEALQPLVDDLQPLLRQVGDLERILARLALRTARPRDLARMRYAF QQLPEIQALIGGHATPHIAKLAEQAGQFEELRELLERAVVETPPVLVRDGGVIAPGYNDE LDEWRALADGATDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVSRGQSHLVPIHYVRR QTLKNAERYIIPELKEYEDKVLTSKGKALALEKRLYEELFDLLLPHLADLQQSATALAEL DVLSNLAERADTLNYVRPELSDKAGIKIVGGRHPVVEQVLKEPFIANPLSLSPQRRMLVI TGPNMGGKSTYMRQAALIVLMAHIGSFVPAEKAVIGPVDRIFTRVGAADDLASGRSTFMV EMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLASRIKAMTLFATHYFEL TTLPEKLEGVYNVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPRDVIKRARQK LKELETLSAQTGNSQIDGSQLQLLAEPESSPAVEALEELDPDTLTPRQALDWLYRLKGMM >gi|316918029|gb|ADCU01000020.1| GENE 253 273856 - 274953 943 365 aa, chain + ## HITS:1 COG:YPO2957 KEGG:ns NR:ns ## COG: YPO2957 COG2951 # Protein_GI_number: 16123139 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Yersinia pestis # 1 362 7 367 370 585 78.0 1e-167 MRYLTALLPIVVLLSACSSKPKPSNDVTETTPPTAKGGFLLEPSHSGQVQLGDFAYDPAM NRFVDKMVSEHGFDRQQLHDVLAQTKRLDYVLNLMDRQAPTTRPPAGPNGAWLRYRGKFI TPDNVQNGVVFWNQYQNALQRAQQVYGVPPEIIVGIIGVETRWGRVMGKTRIIDALATLS FAYPRRAEYFSGELETFLLMAREEGDDPLSLKGSFAGAMGYGQFMPSSFKSYAVDFNGDG HINLWDPEDAIGSVANYFKAHGWQSGKKVAVPANGQAPTLENGFKTNYTISALAEAGLSP QSSLDGYQQASLLRLDMGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGEAVGQAARQG SVFQN >gi|316918029|gb|ADCU01000020.1| GENE 254 275231 - 275992 250 253 aa, chain + ## HITS:1 COG:STM4295 KEGG:ns NR:ns ## COG: STM4295 COG2207 # Protein_GI_number: 16767545 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 250 1 250 253 206 42.0 5e-53 MKLRCQECCAVVLTTQNTEISINNEKITDVKGNSLILLSCKNNSLEINHFDNQCVAYISR ETINNYLTFLKRDITKVCHEARRSPDYFVEPCRAPKIFAEAASLSQQEDLDDISRVRKNS LLFTVLSVFLAHRRFLPFLIKVSQNDVRTQVYTIIQSNISKGWALGSIASSLCMSASVLK KRLREENTSYTKIITDCRMRFAAEQLTIYHQSIAQVSAQCGYSSTSYFISVFKKYYGTTP LNYIRKYSSKMQG >gi|316918029|gb|ADCU01000020.1| GENE 255 276283 - 277470 1009 395 aa, chain + ## HITS:1 COG:YPO3132 KEGG:ns NR:ns ## COG: YPO3132 COG0845 # Protein_GI_number: 16123294 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Yersinia pestis # 17 393 11 386 395 444 64.0 1e-124 MFIKSLFVRSICTSRYAFILALSAGFLLAGCRDDNKTAVLPERPTVGVVTQKDAPLQITT ELPGRTEAFRVAEVRPQVGGIILKRHFVEGSNITAGASLYQIDPAPYHASYDSAAADLAQ AKAAAHIAQLTANRDRSLWAKKYISQQQLDSAVADMRQANATVTAAQAALELARINLAYT KVIAPISGRIGGSRVTEGALVTPDQSQALAVIQQLDPIYVDVTQSSNDFLRLKQELASGS LAQTDGKASVTLLLANGKTYPLTGTLEFSDVTVDESTGSLTLRAVFPNPHGDLLPGMFVR ARLDEGVRPHALLVPQQGLTRNARGEATVLVVGVDDRVENKIVNAAQAIGSHWLVTGGLS AGDRVIVSGLQRIRPGMQVVAQEAHLSDTWGESHQ >gi|316918029|gb|ADCU01000020.1| GENE 256 277537 - 280641 2735 1034 aa, chain + ## HITS:1 COG:YPO3133 KEGG:ns NR:ns ## COG: YPO3133 COG0841 # Protein_GI_number: 16123295 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Yersinia pestis # 1 1034 1 1034 1050 1587 78.0 0 MAKFFIDRPIFAWVIAIILMMAGALAIWNLPVAQYPTIAPPSVVISANYPGADAKTVQNS VTQIIEQNMNGIDNLMYMSSTSDSSGSASVTLTFQSGTDPDIAQVQVQNKLQLAMPLLPQ EVQQQGISVEKSSSSFLMVAGFISEDNTMSQPDIADYVASNIQDPLSRTEGVGDVQLFGS QYAMRIWLDPHKLNNFHLTPLDVIDQIKVQNNQIAAGQLGGMPAVAGQELNASIIAQTRL QSPQEFGKILLKVQPDGSRVLLRDVAKVELGSENYSTQARFNGKPAAGLGIKLATGANAL DVANNIKAELVKLQPFFPQGLKVVYPYDTTPFVKISINEVVKTLLEAVVLVFLVMYLFLQ NLRATLIPTIAVPVVLLGTFAILDVFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVL EEEGLSAKEATKKSMDQIQSALVGIALVLSAVFVPMAFFGGATGAIYRQFSVTIVSAMVL SILVAIILTPALCATILKPVTPGTSHNKGGFFGWFNRLFNKFTHHYTDSVDHMLVKTGRY MAIYLLVVVGMGVLFIQLPTGFIPEEDQGIALTSVQLPAGATQQRTDKVLAQVTDYFLKK EQRDVESVFTVSGFGFSGQGQNNGLAFVSLKPWSERQGEENRVTAILARAAVAFGQIKDA LVFPFNLPAISGLGTSTGFDFELIDQGNLGHEKLTEARNELLGMAAQHPEMLTGVRPNGM EDTPQFKVTIDQEKALAQGVSLADINQTLSSAFGGTYVNDFIDNERVKKVYVQAQAPYRM LPENIDSWYVRSASGQMVPFSSFASAHWEYGSPRLERYNGLPSMEILGEATRGKSSGEAM AMMEALAAKLPNGVGYDWTGMSYQERLSGNQAPALYAISLVVVFLSLAALYESWSIPFSV MLVVPLGIIGALLAVTLRSMNNDVYFQVGLLTTIGLSVKNAILIVEFAKDLIDREGKNVH EATLEAVRMRLRPILMTSLAFILGVLPMAISTGAGSAAQNAVGTGVIGGMISATALTIFL VPVFFVVIERRFAR >gi|316918029|gb|ADCU01000020.1| GENE 257 280837 - 281325 301 162 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 16 157 758 898 904 120 49 6e-26 MTDDVLLELSVTLGERLKGIGATLTCAESCTGGLIAKAITDISGSSSYFERGYVTYSNEA KHEMLGVTHESLQLYGAVSEAVVNEMAQGALKVAHADFAVSVSGIAGPDGGSVAKPVGTV WFGFAAKDGRAYAIRQYFPGGRLQVRQLAAEFALRVLIEKFL >gi|316918029|gb|ADCU01000020.1| GENE 258 281398 - 282450 1110 350 aa, chain + ## HITS:1 COG:VC0543 KEGG:ns NR:ns ## COG: VC0543 COG0468 # Protein_GI_number: 15640565 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Vibrio cholerae # 1 328 59 386 412 540 80.0 1e-153 MDENKQRALAAALGQIEKQFGKGSIMRLGDTQTLDIDSVSTGSLSLDVALGIGGLPMGRV VEIFGPESSGKTTLTLSVIASAQAAGKTCAFIDAEHALDPIYAGKLGVQVDDLLISQPDT GEQALEICDALVRSGAVDVIVVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTAN IKNANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAIKDGDEVVGNE TRVKVVKNKVAPPFRQAEFQILYGAGISKESELIDLGVKHKLVDKSGAWYAYNGDKIGQG KSNSMKYLQENPAIRAELDTKLRELLLSHAAAENANHKPSADEELLEDDA >gi|316918029|gb|ADCU01000020.1| GENE 259 282517 - 282957 258 146 aa, chain + ## HITS:1 COG:YPO3306 KEGG:ns NR:ns ## COG: YPO3306 COG2137 # Protein_GI_number: 16123459 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 143 1 184 187 160 50.0 7e-40 MTETLNRAMRLLAQRDHSETELRRKLAAQDVSEEDVEQAIAYCHEHHWLDDRRFAERYLV MRSQKGYGVQRIQQELGMKGIARELIHDAFASSDIDWCALAKQTAHRKFGQTLPQEWKEK AKVQRFLLYRGFFQEEIYAVFSNLSD >gi|316918029|gb|ADCU01000020.1| GENE 260 283092 - 285719 2630 875 aa, chain + ## HITS:1 COG:ECs3554 KEGG:ns NR:ns ## COG: ECs3554 COG0013 # Protein_GI_number: 15832808 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 875 1 875 876 1484 84.0 0 MSKSTAEIRQAFLDFYHSKGHQIVESSSLVPNNDPTLLFTNAGMNQFKDVFLGIDKRSYS RATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENW FNLPKEKLWVTVYETDDEAFNIWADEVGVPRERIIRIGDNKGAPFASDNFWQMGDTGPCG PCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMG LERIAAVLQHVNSNYDIDLFRTLIAATAKVTGATDLSSKSLRVIADHIRSCAFLVSDGVL PSNEGRGYVLRRIIRRAVRHGNMVGAKETFFYKLVAPLIEVMGPAADELKRQQSMVEQVL KTEEEQFARTLERGLALLDDELSKLSGDTLDGETAFRLYDTYGFPLDLTADVCRERNLKV DEIGFERAMEEQRRRARESSGFGADYNSMIRVDGASKFSGYDHNQQHSSVTALFRDGQAV DVLNAGEEGVVVLNETPFYAESGGQVGDKGELTAQGVSFVVTDTQKYGQAIGHQGKVAQG SVKVGDSVEATIDEARRSRIRLNHSATHLLHAALRQVLGDHVSQKGSLVSDRNLRFDFSH FEAMKPEQIRQVEDIVNAQIRRNLPIETNIMDLEDAKAKGAMALFGEKYDESVRVLSMGD FSTELCGGTHARQTGDIGLFRITSEAGTAAGVRRIEAVTGEGAIAVMHQDADALREAASL VKSDAHSVAEKIRAVMDKTRQLEKELQQLKDQQAAQESASLSSKAVDVKGVKLLVSQLDN VEAKMLRTMVDDLKNQLGSGVVVLATTAEGKVSLVAGVTKDLTDKVKAGELIGMVAQQVG GKGGGRPDMAMAGGSDATALPQALAGVEAWVADKL >gi|316918029|gb|ADCU01000020.1| GENE 261 285973 - 286158 203 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855109|ref|ZP_02477881.1| 30S ribosomal protein S1 [Haemophilus parasuis 29755] # 1 52 1 52 61 82 69 1e-14 MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQTT Y >gi|316918029|gb|ADCU01000020.1| GENE 262 287654 - 288220 477 188 aa, chain + ## HITS:1 COG:YPO3303 KEGG:ns NR:ns ## COG: YPO3303 COG0637 # Protein_GI_number: 16123456 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Yersinia pestis # 1 188 1 188 188 293 74.0 9e-80 MYDRFQGLIFDMDGTLLDTEPTHRRAWRQVLGQYGMTYDENAMVALNGSPTWRIAQIIIE NNQADMDPHHLAALKTAAVESMLLDSVKPLPLIDVVLAYKGKKPMAVGTGSEHRMADALL RHLGLHDCFQAIVGADDVTRHKPEPDTFLRCAELIGVAPKDCVVFEDADFGIQAAQRANM AWVDVRKL >gi|316918029|gb|ADCU01000020.1| GENE 263 288247 - 288648 336 133 aa, chain + ## HITS:1 COG:YPO3302 KEGG:ns NR:ns ## COG: YPO3302 COG1238 # Protein_GI_number: 16123455 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 132 10 141 142 147 65.0 7e-36 MFASSFTSATLLPGNSEIVLTAFLLAGQVSPWWLVLTAIVGNILGGLTNVIIGRLLPDVK PQRGVQLSLRWLQRYGAVTLLLSWVPIIGDLLCVLAGWLRMPWVPVAFYLSIGKAVRYVA LAWLTLQGMSWWS >gi|316918029|gb|ADCU01000020.1| GENE 264 288719 - 290290 1419 523 aa, chain + ## HITS:1 COG:YPO3301 KEGG:ns NR:ns ## COG: YPO3301 COG2918 # Protein_GI_number: 16123454 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Yersinia pestis # 1 523 1 519 519 818 74.0 0 MIPDVSKALTWLESHPDALNGIRRGIERETLRVTPEGQLAASGHPEALGKALTHPWITTD FAESLLEFITPVDASIDHMLSFLTDIHRYVARNLGSERMWPMSMPCFISKEEDIVLAQYG TSNVGQFKTLYREGLKNRYGALMQTISGVHYNFSLPIEFWREWAGVEDAESGKEQISAGY FRLIRNYYRFGWVIPYLFGASPAICSSFLNGRETNIPFEQNGHMLYLPYATSLRLSDLGY TNKSQNDLGITFNNLPDYVTALKKAIHTPSAEFAKLGVKVDGRYRQLNANVLQIENELYA PIRPKRVTKGDESPSDALLRGGIEYIEVRSLDINPFTAIGVNADQSRFLDLFLIWCVLAD APEMSSDELLCTRKNWNRVILEGRKPGQTIGIGCNDQRQPLAKVGKELFADLQRVAEVLD SINGNKQYQQVCTKLVAGFDDASLTYSAQVLEQMMEKGVGGFGRELSERYRQELSSQPLE VLSEAQLHQQVEESIKRQAQMEAQDSMPGAMGFEEYLHLHAGR >gi|316918029|gb|ADCU01000020.1| GENE 265 290447 - 290962 578 171 aa, chain + ## HITS:1 COG:luxS KEGG:ns NR:ns ## COG: luxS COG1854 # Protein_GI_number: 16130599 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Escherichia coli K12 # 1 171 1 171 171 303 84.0 1e-82 MPLLDSFTVDHTRMAAPAVRVAKNMKTPHGDNITVFDLRFCHPNQEILPERGIHTLEHLF AGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPEESRVADAWKAAMEDVLKVTDQRKI PELNEYQCGTFSMHSLQEAHDIARHILEKGVGVNHNDDLALPKEKLAELHI >gi|316918029|gb|ADCU01000020.1| GENE 266 291029 - 292330 1106 433 aa, chain - ## HITS:1 COG:YPO3298 KEGG:ns NR:ns ## COG: YPO3298 COG4536 # Protein_GI_number: 16123451 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorB # Organism: Yersinia pestis # 1 417 2 417 427 647 81.0 0 MEHVSTGTLITILVIMVIVSAYFSASETGMMTLNRYRLRHLSKQGLRSARRVEKLLKHPD RLISLVLIGNNLVNILASALATVVGIRLYGDAGVAIATGVLTFIVLVFAEVLPKTFAALY PERVAFPSSVLLLPLQKIMMPLVWLLNGITRILLRLCGIRSTAHPSDAVSKDELRSIVNE SNSQISRRNQDMLISVLDLEKVTVDDIMVPRNEIVGIDINDDWKSILRQLTHSPHGRIVL YRGSLDDSIGMLRVREAYRLMIEKKEFNKENLLRAADEIYYIPESTHLSVQLLKFQRNKE KMGIVVDEYGDIKGLVSVEDILEEIVGDFTTSMSPSLAEEVMPQSDGSVLVDGTANIREL NKAFNWTLPADGPRTMNGMLLEELEDIPLPGAHVNIGPYHIQILDVQDNMIKQVRVSSVK RKKADEESERYSS >gi|316918029|gb|ADCU01000020.1| GENE 267 292400 - 293191 682 263 aa, chain - ## HITS:1 COG:YPO3297 KEGG:ns NR:ns ## COG: YPO3297 COG4137 # Protein_GI_number: 16123450 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Yersinia pestis # 1 262 35 296 297 350 79.0 2e-96 MPAFAILAMIAYLLSLGLIIPSLVQNNRAYRRLALLFAGIALISHAVALQARIFDVSTGQ NLSLLNIGSIVSLMICFVMTVVASRDRGWFLLPIVYSFALINLGLASFVPGEFITHLETT PSLMLHIGLALFSYATLIIAALYALQLALLDYLLKNKKLTFTADMPPLMSIERKMFHITQ VGVVLLTLTLCTGMLYMDNLFSKENVHKAVLSILAWFVYVLLLWGHFREGWRGRRVVWFS LLGAFLLTMAYFGSRLLQEVMVS >gi|316918029|gb|ADCU01000020.1| GENE 268 293359 - 294720 1373 453 aa, chain + ## HITS:1 COG:YPO3296 KEGG:ns NR:ns ## COG: YPO3296 COG0541 # Protein_GI_number: 16123449 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Yersinia pestis # 1 453 1 453 453 733 92.0 0 MFENLSDRLSRSLRNISGRGRLTEENIKDTLREVRMALLEADVALPVVRDFINRVKESAV GHEVNKSLTPGQEFVKIVKNELTNAMGEVNTELNLAAQPPAVVLMAGLQGAGKTTSVGKL GKFLKEKHKKKVLVVSADVYRPAAIKQLETLAQGVGIDFFPSDVKEKPIEIVSRALQHAK QKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAINPVETLFVVDAMTGQDAANTAKAFNEAL PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFYPDRVASRILGMGDV LSLIEDIESKVDRAQAEKLAQKLKKGDGFDLTDFMDQLKQMRNMGGMTSMLAKMPGMGQL PENVKSQMDDKLLVRMEAIISSMTLKERANPEIIKGSRKRRIAQGSGMQVQDVNRLLKQF DEMQRMMKKMKKGGLSKMMRGMKGMMPPGFPGR >gi|316918029|gb|ADCU01000020.1| GENE 269 294891 - 295139 395 82 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238791383|ref|ZP_04635022.1| 30S ribosomal protein S16 [Yersinia intermedia ATCC 29909] # 1 82 1 82 82 156 93 8e-37 MVTIRLARGGAKKRPFYQVVVTDSRNARDGRFIERVGFFNPLAAGQAEALRLDLDRVSHW VGLGATVSDRVAALIKEAKKAA >gi|316918029|gb|ADCU01000020.1| GENE 270 295158 - 295691 200 177 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 5 172 1 160 179 81 30 3e-14 MSKQLTNPVVLGKLGSSYGIRGWLRVFSSTEDAESIFEYQPWFIQQAGQWQHVELESWKR HNQDLVIKIKGVDDRDAANALTNREIVVEESQLPELEDGDYYWKDLMGCQVVTTAGYELG KIIDMMETGSNDVMVVKANLKDAFGIKERLIPFLDGQVIKKVDLATHIVEVDWDPGF >gi|316918029|gb|ADCU01000020.1| GENE 271 295935 - 296525 466 196 aa, chain + ## HITS:1 COG:STM2674 KEGG:ns NR:ns ## COG: STM2674 COG0336 # Protein_GI_number: 16765989 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Salmonella typhimurium LT2 # 1 194 60 253 255 321 88.0 6e-88 MLMMVQPLREAIHAAKAAAGEGAKVIYLSPQGRKLDQQGVCELATNEKLILVCGRYEGID ERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHQASAEEDSFADGLLDCP HFTRPEVLEGMAVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLESLALTDEQAKLLAE FRKEYRLEQQDHEGNV >gi|316918029|gb|ADCU01000020.1| GENE 272 296589 - 296945 566 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|22124807|ref|NP_668230.1| 50S ribosomal protein L19 [Yersinia pestis KIM] # 1 115 1 115 115 222 98 1e-56 MSNIIKQIEQEQMKQDVPAFRPGDSLEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFT VRKISNGEGVERVFQTHSPVIDSITVKRRGAVRKAKLYYLRERTGKSARIKERLGAKA >gi|316918029|gb|ADCU01000020.1| GENE 273 297078 - 297815 183 245 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803113|ref|ZP_02196997.1| 50S ribosomal protein L9 [Vibrio campbellii AND4] # 8 245 9 254 254 75 25 3e-12 MPLCLSILSALTSSAAFADTSLFTAMDDPSTAKKSFDGNVQAGYNSQSGNSESSNLLANT TMTWFNPETAYSLWGTANNTKSGDTRSSEKYQAGARSRYNLSPDNYMFGQGSWLNDRYAG YDSRSTGTLGYGRQMLATPSQNLRVEFGPGVRHDEYHGGGRETQALAYAAGNYAYQLTKN TQFTQGVSVMANDDTTVNSETALNVGINDDFSLRLSYNMVYNTEPPASAPKKTDTSTAIT LQYNL >gi|316918029|gb|ADCU01000020.1| GENE 274 298037 - 299380 1082 447 aa, chain - ## HITS:1 COG:ZdcuB KEGG:ns NR:ns ## COG: ZdcuB COG2704 # Protein_GI_number: 15804715 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 EDL933 # 37 446 38 443 446 431 56.0 1e-120 MITLQFAIIILCLLLGTRYGGMGLGLISGIGLFCLTFIFGLEPGKPPVEVILTILAVIGC ASVLQTAGGLNVMMQFAERLLRKHPQHITILAPLTTWTLTFLCGTGHVVYTMFPIISDIA LKKGIRPERPMAVASVASQMAITASPVSVAVVSLVSILGAAHGIGHAYSILEILAISVPA SLCGVIVAALWSLRRGKDLDKDPEFQAKVSDPKQREFIYGNSETLLNQKFSKHAYWSTWI FFAAILVVVLLGAFSDLRPSYEIKGVMKPLSMNLVIQMMMLIAGAIILMACKVKPADISS GAVFKAGMVAIFSVFGVAWMSDTFFQAHMQDLKVVLEDVVKSQPWTYAIVLFLVSKLVNS QAAALTAIAPMGLQLGVDPKMLIAFFPAAYGYFVLPTYPSDLACIGFDRSGTTRIGKFII NHSFIIPGFIGVITSCIVGYALVTSFM >gi|316918029|gb|ADCU01000020.1| GENE 275 299561 - 299911 226 116 aa, chain - ## HITS:1 COG:no KEGG:Dd586_3171 NR:ns ## KEGG: Dd586_3171 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii_Ech586 # Pathway: not_defined # 28 109 28 109 121 101 53.0 8e-21 MNKYLLISCLVLASCSQYPGRIDKGSVWFNAGFDDASSGKVVRDNDALTEWYGDPEVDRA AYLDGYNHGAHRLCQGSVIEQWGAQGKPFPASCDSAVNIAELRLKWQQGLNKTFPR >gi|316918029|gb|ADCU01000020.1| GENE 276 299973 - 300722 519 249 aa, chain - ## HITS:1 COG:YPO3287 KEGG:ns NR:ns ## COG: YPO3287 COG3279 # Protein_GI_number: 16123442 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Yersinia pestis # 12 248 1 237 238 360 75.0 1e-99 MVKCALHHGGHMLKVIIVDDEQPARDELNELLSNKPGIEVIAQCGNALEAIPAIHKLQPD VIFLDIQMPRISGLELVSMLDPDTMPYIVFVTAFDEYAIQAFEKHAFDYLLKPIDSSRLN KTLERLQKGAIVKQNLHPFSEPPLKHIPCHGLNRIFLLKLEEVEYLSSELSGIHVVGINQ SGYTQLTLKTLEEKTPFVRCHRQYMVNADQLREIQLLDNGSAEVITHTGKKIPVSRRYLK NLKERLGIT >gi|316918029|gb|ADCU01000020.1| GENE 277 300937 - 302019 758 360 aa, chain + ## HITS:1 COG:YPO3286 KEGG:ns NR:ns ## COG: YPO3286 COG0722 # Protein_GI_number: 16123441 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Yersinia pestis # 3 358 1 356 356 583 80.0 1e-166 MIMQKDALNNVHISGEQILITPEELKNRFPLSTQLQEQIAASRQDIANILEGKDHRLLVV CGPCSIHDTDAALDYARRLQSISAELRDQLYIVMRVYFEKPRTTVGWKGLINDPHMDGSF DVETGFIKARELLLSLVEMGLPLATEALDPNSPQFLGDLFSWSAIGARTTESQTHREMAS GLSMPVGFKNGTDGSLGTAINAMKAASMAHRFVGINQSGQVCLLQTQGNPHGHVILRGGK TPNYSAEHVAECEAQMQKAGLRPALMIDCSHANSNKDFRRQSAVAESVIEQISAGNQSII GIMLESNIFEGNQSSEQPRSEMKYGVSVTDACIDWGTTDHLLRDMHQKLGATLRSRSAGE >gi|316918029|gb|ADCU01000020.1| GENE 278 302025 - 303146 1019 373 aa, chain + ## HITS:1 COG:YPO3285_2 KEGG:ns NR:ns ## COG: YPO3285_2 COG0287 # Protein_GI_number: 16123440 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Yersinia pestis # 100 373 1 274 274 485 86.0 1e-137 MVAELTALRDQIDEVDKGLLDLLARRLQLVAEVGEVKSRYGLPIYVPEREASMLASRRKE AELLGVPPDLIEDVLRRVMRESYSSENDKGFKSLKPDLRPVVIVGGHGQMGRLFEKLLQL SGYEVRILEQEDWPQAESLCADAGMVIVSVPIHLTEQVIDRLPQLPHDCVLVDLASVKNK PLQAMLAAHQGPVLGLHPMFGPDVGSLAKQVVVYCDGRQPEAYQWLLEQLQVWGARLHRI SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELVMVGRLFAQDP QLYADIIMSSENNLALIKRYYKRFGEAIALLESHDKAAFIDSFKKVEHWFGDYAQHFQAE SRSLLRQANDSRK >gi|316918029|gb|ADCU01000020.1| GENE 279 303212 - 304363 809 383 aa, chain - ## HITS:1 COG:ECs3462_2 KEGG:ns NR:ns ## COG: ECs3462_2 COG0077 # Protein_GI_number: 15832716 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Escherichia coli O157:H7 # 105 383 1 279 282 445 77.0 1e-125 MTTDNPLLAIREQISAVDSKLLALLSERRELAAAVARAKQKSHRPIRDKERERELLNSLT EQGKVLNLDSHYITRLFQLIIEDSVLTQQALLQHQYNHTTQKSARIAFLGPKGSYSHLAA RQYAARHFELLIECGCHRFQDIFNHVETGQADFAVLPIENTSSGSINEVYDLLQHTSLSI VGELTIPIDHCILVAGDTHLIDIKTVYSHPQPFQQCSQFLNAYPNWKIEYCESTAAAMEK VAALNSPHAAALGSEAGGSLYGLQPLEQNLANQQQNITRFIVLARKAIEVTSQVPAKTTL IMATGQQSGALVEALLVFRDHSIVITKLESRPINGNPWEEMFYLDVQANMNDAAMKAALK DLQAITRSQKILGCYPSENVVPV >gi|316918029|gb|ADCU01000020.1| GENE 280 304655 - 305008 462 117 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|146312717|ref|YP_001177791.1| translation inhibitor protein RaiA [Enterobacter sp. 638] # 1 108 1 108 113 182 83 1e-44 MTISITSKQMEITTAIRQHVEDRLSKLEKWQTHLINPHIILSKEPKLYVADATINTPNGQ LIASAKHEDMYAAINELIAKLERQLNKVQHKGEARRASASVKDANLEEANLAEEDVE >gi|316918029|gb|ADCU01000020.1| GENE 281 305334 - 306071 811 245 aa, chain - ## HITS:1 COG:YPO3278 KEGG:ns NR:ns ## COG: YPO3278 COG4105 # Protein_GI_number: 16123435 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Yersinia pestis # 1 243 1 243 243 402 90.0 1e-112 MTRMKYLVAAATLSLALAGCSSSKDAVPDNPPSEIYATAQQKLQDGNFKAAITQLEALDN RYPFGPYSQQVQLDLIYAYYKSADLPMAQASIDRFMRLNPTHPNIDYVLYMRGLTDMALD DSALQGFFGIDRSDRDPEHARQAFRDFSQLVQRYPNSQYSADATKRLVYLKDRLAKYELS VAQYYTKRGAYVAVVNRVENMLRNYPDTQATRDALPLMENAYKQMNLTAQADKVAKIIAE NPAKA >gi|316918029|gb|ADCU01000020.1| GENE 282 306203 - 307183 1024 326 aa, chain + ## HITS:1 COG:YPO3277 KEGG:ns NR:ns ## COG: YPO3277 COG0564 # Protein_GI_number: 16123434 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Yersinia pestis # 1 325 1 325 325 572 88.0 1e-163 MAQQVELTATVTESQLGHRLDQALAELFPDYSRSRIKEWILDDRVKVNGKIINKPKEKVL GGEEIAIDALIEEEARWEPQNIPLDIVYEDSDILVINKPRDLVVHPGAGNPDGTILNALL YYYPEIVDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVEALQAREITREYEAVAIGTMT AGGTVEEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM AHISHPLVGDPLYGGRPRPPKGASEEFITILRGFDRQALHATMLRLYHPISGIQMEWHAP LPQDMVDLITALQADTEEFKDEMDWL >gi|316918029|gb|ADCU01000020.1| GENE 283 307180 - 307914 468 244 aa, chain + ## HITS:1 COG:ECs3456 KEGG:ns NR:ns ## COG: ECs3456 COG1496 # Protein_GI_number: 15832710 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 243 1 242 243 314 62.0 1e-85 MSSLIVPTWSAPENVVAFNTSRKGGVSFPPYDGLNLGTHVGDDAVIVAENRRLLTEMSGA PSEPFWLEQVHGVRVLRLNADSDRTDNQADASYTDVAGQVCTVMTADCLPVLFCNRQGTE VAAAHAGWRGLCQGVLEQTLACFRSAPEDIIAWFGPAIGPEMFEVGAEVREAFMLQDADA EQAFVAREDKYLADIYQLARLRLHRAGVHEISGGDLCTVSDKSRFFSYRREPVTGRMAAL IWFR >gi|316918029|gb|ADCU01000020.1| GENE 284 308091 - 310664 1883 857 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 857 1 811 815 729 46 0.0 MRLDRLTSKFQLALADAQSLALGRDNQFIEPVHLMSALLNQEGGTVRPLLTSAGVNTANL RQELEQAISRLPQVEGAGGDVQPSNELIRVLNLCDKLAQKRNDTFISSELFVLAALEDRG NLGDILKAAGATTQKVSTAIEQMRGGEKVDDANAEDQRQALKKYTVDLTERAEQGKLDPV IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL DMGSLIAGAKFRGEFEERLKAVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLK PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELH HHVQITDPAIVAAANLSHRYIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRII QLKLEQQALNKESDDASKKRLEMLNEELEHKEREYSELEEEWKAEKASLSGTQNIKAEIE QAKISLEQARRVGDLAKMSEIQYGKLPDLEKQLEAATQSEGKTMKLLRNKVTDVEIAEVL ARWTGIPVSRMLESERAKLLRMEDDLHERVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGS FLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQDRFGQLDYGEMKELVMSVVSHHFRPEFINRIDETVVFHPLDQKNIKAIARIQLE RLYQRLEEKGYSVTITDAALEQLSKAGFDPVYGARPLKRAIQQEIENPLAQQILSGKLIP GKAITLDVDGDQIIAKQ Prediction of potential genes in microbial genomes Time: Wed May 18 15:36:10 2011 Seq name: gi|316917754|gb|ADCU01000021.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.21, whole genome shotgun sequence Length of sequence - 307040 bp Number of predicted genes - 278, with homology - 271 Number of transcription units - 156, operones - 60 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 1132 - 1191 3.3 2 2 Op 1 32/0.000 + CDS 1261 - 2292 824 ## COG1135 ABC-type metal ion transport system, ATPase component 3 2 Op 2 22/0.000 + CDS 2285 - 2938 682 ## COG2011 ABC-type metal ion transport system, permease component + Prom 2944 - 3003 1.6 4 2 Op 3 . + CDS 3048 - 3863 945 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 3895 - 3931 7.6 + Prom 3892 - 3951 4.1 5 3 Op 1 . + CDS 3977 - 4396 315 ## SG0248 outer membrane lipoprotein 6 3 Op 2 6/0.161 + CDS 4393 - 5100 543 ## COG1720 Uncharacterized conserved protein + Prom 5139 - 5198 2.3 7 4 Tu 1 . + CDS 5222 - 6940 1771 ## COG0442 Prolyl-tRNA synthetase + Term 6965 - 6996 4.1 - Term 6953 - 6984 4.1 8 5 Tu 1 . - CDS 7020 - 7529 357 ## COG3045 Uncharacterized protein conserved in bacteria - Prom 7600 - 7659 5.3 + Prom 7501 - 7560 4.9 9 6 Tu 1 . + CDS 7741 - 8619 717 ## COG2207 AraC-type DNA-binding domain-containing proteins 10 7 Tu 1 . - CDS 8616 - 9263 622 ## COG0406 Fructose-2,6-bisphosphatase - Prom 9304 - 9363 3.2 + Prom 9230 - 9289 2.6 11 8 Tu 1 . + CDS 9316 - 9849 488 ## COG1986 Uncharacterized conserved protein + Term 9880 - 9915 0.4 - Term 9809 - 9845 3.1 12 9 Op 1 4/0.304 - CDS 9917 - 10243 295 ## COG2973 Trp operon repressor 13 9 Op 2 . - CDS 10338 - 12266 1515 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 12410 - 12469 5.0 - Term 12423 - 12449 -0.7 14 10 Tu 1 . - CDS 12528 - 12740 233 ## COG1278 Cold shock proteins - Prom 12764 - 12823 3.6 + Prom 13226 - 13285 4.0 15 11 Tu 1 . + CDS 13305 - 14972 1904 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 14984 - 15024 6.8 - Term 14978 - 15006 3.0 16 12 Tu 1 . - CDS 15040 - 15921 581 ## COG0583 Transcriptional regulator - Prom 15983 - 16042 3.0 + Prom 15947 - 16006 2.3 17 13 Tu 1 . + CDS 16065 - 17066 935 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases + Term 17081 - 17115 5.0 18 14 Op 1 . - CDS 17111 - 17968 821 ## Ent638_0663 putative periplasmic protein 19 14 Op 2 . - CDS 17985 - 19763 864 ## SG0159 hypothetical protein - Prom 19805 - 19864 2.0 - Term 20237 - 20275 -0.6 20 15 Op 1 1/0.536 - CDS 20292 - 21533 1152 ## COG3172 Predicted ATPase/kinase involved in NAD metabolism - Prom 21563 - 21622 3.6 - Term 21566 - 21609 0.4 21 15 Op 2 5/0.268 - CDS 21626 - 23008 1277 ## COG1066 Predicted ATP-dependent serine protease - Prom 23045 - 23104 2.8 - Term 23120 - 23177 12.6 22 16 Tu 1 . - CDS 23188 - 24213 726 ## COG0560 Phosphoserine phosphatase - Prom 24277 - 24336 1.9 + Prom 24172 - 24231 1.7 23 17 Tu 1 . + CDS 24277 - 24981 443 ## COG3726 Uncharacterized membrane protein affecting hemolysin expression + Term 25010 - 25050 2.1 24 18 Tu 1 . - CDS 25496 - 26365 812 ## COG0313 Predicted methyltransferases - Prom 26418 - 26477 3.0 + Prom 26341 - 26400 3.3 25 19 Op 1 10/0.036 + CDS 26428 - 28470 1721 ## COG3107 Putative lipoprotein 26 19 Op 2 11/0.018 + CDS 28428 - 28841 255 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 27 19 Op 3 11/0.018 + CDS 28878 - 29468 348 ## COG0279 Phosphoheptose isomerase 28 19 Op 4 . + CDS 29479 - 30075 591 ## COG2823 Predicted periplasmic or secreted lipoprotein + Term 30107 - 30137 3.0 - Term 30094 - 30124 3.0 29 20 Op 1 3/0.357 - CDS 30164 - 30901 672 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 30 20 Op 2 2/0.411 - CDS 30898 - 31551 638 ## COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis - Prom 31658 - 31717 3.5 31 21 Tu 1 . - CDS 31944 - 34286 2317 ## COG0642 Signal transduction histidine kinase - Prom 34310 - 34369 4.5 32 22 Tu 1 . - CDS 34588 - 35490 617 ## COG1242 Predicted Fe-S oxidoreductase - Prom 35616 - 35675 5.5 33 23 Op 1 21/0.000 + CDS 36183 - 40640 4196 ## COG0069 Glutamate synthase domain 2 34 23 Op 2 . + CDS 40655 - 42073 1213 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 42118 - 42146 1.0 + Prom 42111 - 42170 5.6 35 24 Op 1 5/0.268 + CDS 42264 - 42944 382 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 36 24 Op 2 3/0.357 + CDS 42901 - 43839 296 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 37 24 Op 3 1/0.536 + CDS 43852 - 44322 361 ## COG2731 Beta-galactosidase, beta subunit + Term 44375 - 44423 8.0 + Prom 44388 - 44447 2.7 38 25 Tu 1 . + CDS 44499 - 45380 690 ## COG1737 Transcriptional regulators + Term 45413 - 45442 2.1 - Term 45393 - 45437 10.5 39 26 Op 1 13/0.018 - CDS 45452 - 45934 426 ## COG2969 Stringent starvation protein B 40 26 Op 2 6/0.161 - CDS 45952 - 46593 690 ## PROTEIN SUPPORTED gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase - Term 46877 - 46904 1.5 41 27 Op 1 59/0.000 - CDS 46940 - 47332 648 ## PROTEIN SUPPORTED gi|50119267|ref|YP_048434.1| 30S ribosomal protein S9 42 27 Op 2 5/0.268 - CDS 47348 - 47791 745 ## PROTEIN SUPPORTED gi|238896727|ref|YP_002921472.1| ribosomal protein L13 - Prom 47950 - 48009 4.2 43 28 Tu 1 . - CDS 48068 - 49216 875 ## COG1485 Predicted ATPase - Prom 49253 - 49312 5.0 + Prom 49411 - 49470 5.2 44 29 Tu 1 . + CDS 49500 - 49895 514 ## COG3105 Uncharacterized protein conserved in bacteria + Term 49905 - 49941 6.5 + Prom 49911 - 49970 3.1 45 30 Tu 1 6/0.161 + CDS 50070 - 51401 1294 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 51447 - 51487 7.1 + Prom 51437 - 51496 3.1 46 31 Tu 1 . + CDS 51523 - 52599 932 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 52628 - 52671 4.3 - Term 52616 - 52659 4.3 47 32 Op 1 11/0.018 - CDS 52679 - 53938 1254 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase - Term 53959 - 53992 2.2 48 32 Op 2 6/0.161 - CDS 54005 - 54259 321 ## COG5007 Predicted transcriptional regulator, BolA superfamily - Prom 54290 - 54349 10.0 - Term 54490 - 54528 5.2 49 33 Op 1 10/0.036 - CDS 54559 - 54873 299 ## COG3113 Predicted NTP binding protein (contains STAS domain) 50 33 Op 2 13/0.018 - CDS 54873 - 55514 679 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component 51 33 Op 3 16/0.000 - CDS 55531 - 56070 506 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 52 33 Op 4 23/0.000 - CDS 56075 - 56857 727 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 53 33 Op 5 . - CDS 56862 - 57692 279 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 57878 - 57937 2.2 + Prom 57938 - 57997 4.3 54 34 Op 1 6/0.161 + CDS 58144 - 59127 683 ## COG0530 Ca2+/Na+ antiporter 55 34 Op 2 13/0.018 + CDS 59203 - 60189 876 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 56 34 Op 3 11/0.018 + CDS 60216 - 60782 592 ## COG1778 Low specificity phosphatase (HAD superfamily) 57 34 Op 4 12/0.018 + CDS 60779 - 61357 470 ## COG3117 Uncharacterized protein conserved in bacteria 58 34 Op 5 19/0.000 + CDS 61326 - 61955 654 ## COG1934 Uncharacterized protein conserved in bacteria 59 34 Op 6 17/0.000 + CDS 61962 - 62687 296 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 + Prom 62725 - 62784 3.5 60 34 Op 7 11/0.018 + CDS 62820 - 64253 1267 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 61 34 Op 8 11/0.018 + CDS 64277 - 64564 412 ## PROTEIN SUPPORTED gi|188532471|ref|YP_001906268.1| putative sigma(54) modulation protein 62 34 Op 9 8/0.071 + CDS 64659 - 65150 376 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) + Prom 65152 - 65211 3.5 63 35 Op 1 7/0.107 + CDS 65293 - 66144 877 ## COG1660 Predicted P-loop-containing kinase 64 35 Op 2 . + CDS 66154 - 66426 379 ## COG1925 Phosphotransferase system, HPr-related proteins + Term 66451 - 66491 6.1 - Term 66487 - 66523 5.0 65 36 Tu 1 . - CDS 66622 - 67722 935 ## COG3203 Outer membrane protein (porin) - Prom 67834 - 67893 4.8 - Term 67848 - 67906 1.8 66 37 Tu 1 . - CDS 67937 - 69856 1536 ## COG3711 Transcriptional antiterminator - Prom 69994 - 70053 6.5 - Term 70200 - 70241 7.1 67 38 Op 1 . - CDS 70305 - 71045 709 ## SeHA_C4848 hypothetical protein 68 38 Op 2 1/0.536 - CDS 71058 - 72173 991 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 69 38 Op 3 . - CDS 72163 - 73296 618 ## COG3964 Predicted amidohydrolase 70 38 Op 4 . - CDS 73364 - 74011 869 ## YE3782 putative inner membrane protein 71 38 Op 5 . - CDS 74030 - 74806 752 ## YE3783 hypothetical protein - Prom 74839 - 74898 7.3 72 39 Op 1 . - CDS 74992 - 75378 196 ## PANA_3486 hypothetical protein 73 39 Op 2 . - CDS 75382 - 75744 501 ## VSAL_I0110 hypothetical protein 74 39 Op 3 . - CDS 75741 - 76094 298 ## AHA_3910 transcriptional regulator - Prom 76259 - 76318 3.7 75 40 Tu 1 . + CDS 76524 - 76934 423 ## COG0782 Transcription elongation factor + Term 77060 - 77092 2.0 76 41 Tu 1 . + CDS 77111 - 78217 727 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases - Term 78083 - 78115 1.4 77 42 Op 1 . - CDS 78268 - 78786 345 ## COG3658 Cytochrome b 78 42 Op 2 2/0.411 - CDS 78789 - 79181 647 ## COG3783 Soluble cytochrome b562 - Prom 79219 - 79278 3.6 - Term 79929 - 79983 5.2 79 43 Tu 1 . - CDS 80212 - 81552 1513 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs + Prom 81810 - 81869 5.6 80 44 Op 1 9/0.036 + CDS 81906 - 82073 69 ## COG1724 Predicted periplasmic or secreted lipoprotein 81 44 Op 2 . + CDS 82096 - 82506 347 ## COG1598 Uncharacterized conserved protein + Prom 82532 - 82591 4.8 82 45 Tu 1 . + CDS 82611 - 83168 814 ## COG3028 Uncharacterized protein conserved in bacteria + Term 83213 - 83243 2.3 - Term 82966 - 83000 -0.6 83 46 Op 1 . - CDS 83248 - 83526 355 ## COG2732 Barstar, RNAse (barnase) inhibitor 84 46 Op 2 . - CDS 83532 - 83990 326 ## ETAE_2972 guanine-specific ribonuclease N1 and T1 - Prom 84065 - 84124 5.3 - Term 84196 - 84241 2.9 85 47 Tu 1 . - CDS 84250 - 85740 1279 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 85778 - 85837 3.8 - Term 85833 - 85865 3.1 86 48 Op 1 . - CDS 85918 - 86955 641 ## COG1609 Transcriptional regulators 87 48 Op 2 . - CDS 86986 - 88701 1404 ## COG4146 Predicted symporter - Prom 88784 - 88843 8.2 + Prom 88825 - 88884 5.8 88 49 Op 1 . + CDS 88919 - 90670 1110 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 89 49 Op 2 . + CDS 90680 - 91471 725 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 90 49 Op 3 1/0.536 + CDS 91471 - 92355 586 ## COG2017 Galactose mutarotase and related enzymes 91 49 Op 4 . + CDS 92348 - 93220 500 ## COG3386 Gluconolactonase 92 49 Op 5 4/0.304 + CDS 93222 - 94091 838 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 93 49 Op 6 1/0.536 + CDS 94118 - 94885 820 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 94 49 Op 7 . + CDS 94895 - 95782 597 ## COG0730 Predicted permeases - Term 95818 - 95853 6.1 95 50 Tu 1 . - CDS 95875 - 97254 1291 ## COG0513 Superfamily II DNA and RNA helicases - Prom 97350 - 97409 2.8 - Term 97407 - 97438 4.1 96 51 Tu 1 . - CDS 97467 - 97730 342 ## PANA_3687 YhcN - Prom 97813 - 97872 3.4 - Term 97866 - 97913 13.4 97 52 Op 1 8/0.071 - CDS 97921 - 99324 1349 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 98 52 Op 2 . - CDS 99368 - 100690 778 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 100720 - 100779 4.6 99 53 Tu 1 . - CDS 100832 - 101392 308 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 - Prom 101527 - 101586 6.4 - Term 101633 - 101664 1.8 100 54 Op 1 8/0.071 - CDS 101679 - 102374 612 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 101 54 Op 2 9/0.036 - CDS 102368 - 103240 717 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 102 54 Op 3 3/0.357 - CDS 103237 - 103896 612 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 103 54 Op 4 6/0.161 - CDS 103910 - 105436 1047 ## COG1070 Sugar (pentulose and hexulose) kinases 104 54 Op 5 . - CDS 105509 - 106846 1205 ## COG0477 Permeases of the major facilitator superfamily - Prom 106891 - 106950 3.5 105 55 Op 1 . - CDS 106966 - 107937 658 ## ECS88_3996 hypothetical protein 106 55 Op 2 3/0.357 - CDS 107977 - 108444 214 ## COG2731 Beta-galactosidase, beta subunit 107 55 Op 3 . - CDS 108457 - 109455 909 ## COG2055 Malate/L-lactate dehydrogenases - Prom 109532 - 109591 8.9 + Prom 109536 - 109595 7.7 108 56 Tu 1 . + CDS 109753 - 110574 618 ## COG1414 Transcriptional regulator + Term 110651 - 110706 4.1 109 57 Tu 1 . - CDS 110600 - 111217 375 ## PAU_00477 hypothetical protein - Prom 111289 - 111348 2.9 - Term 111290 - 111323 0.5 110 58 Tu 1 . - CDS 111375 - 112334 522 ## COG3440 Predicted restriction endonuclease - Prom 112371 - 112430 7.7 - Term 112475 - 112517 7.0 111 59 Tu 1 . - CDS 112548 - 113165 444 ## PAU_00477 hypothetical protein - Prom 113270 - 113329 3.3 + Prom 113797 - 113856 4.6 112 60 Tu 1 . + CDS 113884 - 114795 632 ## COG0583 Transcriptional regulator + Prom 114840 - 114899 3.8 113 61 Op 1 . + CDS 114925 - 116043 1035 ## COG1816 Adenosine deaminase 114 61 Op 2 . + CDS 116059 - 117315 1096 ## COG3069 C4-dicarboxylate transporter + Term 117333 - 117374 6.3 + Prom 117744 - 117803 5.5 115 62 Tu 1 . + CDS 117842 - 118546 720 ## COG1285 Uncharacterized membrane protein + Prom 118564 - 118623 1.6 116 63 Tu 1 . + CDS 118647 - 119534 733 ## COG1741 Pirin-related protein + Term 119616 - 119671 1.1 - Term 119516 - 119565 2.6 117 64 Tu 1 . - CDS 119578 - 121137 1296 ## COG0840 Methyl-accepting chemotaxis protein - Prom 121161 - 121220 2.8 + Prom 121227 - 121286 3.5 118 65 Tu 1 . + CDS 121439 - 122938 1295 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 122974 - 123008 4.3 - Term 122961 - 122994 4.1 119 66 Tu 1 . - CDS 123015 - 125330 2317 ## COG3733 Cu2+-containing amine oxidase 120 67 Tu 1 . - CDS 125707 - 126618 774 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 126685 - 126744 2.9 121 68 Op 1 . - CDS 126758 - 127858 946 ## Spro_0988 hypothetical protein 122 68 Op 2 . - CDS 127872 - 128060 64 ## 123 68 Op 3 . - CDS 128094 - 128303 92 ## 124 68 Op 4 5/0.268 - CDS 128308 - 129093 863 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 125 68 Op 5 4/0.304 - CDS 129108 - 130694 783 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 126 68 Op 6 8/0.071 - CDS 130723 - 131928 1223 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase 127 69 Op 1 4/0.304 - CDS 132055 - 133197 1224 ## COG1960 Acyl-CoA dehydrogenases 128 69 Op 2 . - CDS 133249 - 134772 1228 ## COG1292 Choline-glycine betaine transporter - Prom 134924 - 134983 2.9 + Prom 135229 - 135288 7.8 129 70 Op 1 29/0.000 + CDS 135482 - 136255 707 ## COG2086 Electron transfer flavoprotein, beta subunit 130 70 Op 2 9/0.036 + CDS 136267 - 137214 848 ## COG2025 Electron transfer flavoprotein, alpha subunit 131 70 Op 3 12/0.018 + CDS 137276 - 138568 1099 ## COG0644 Dehydrogenases (flavoproteins) 132 70 Op 4 4/0.304 + CDS 138565 - 138852 268 ## COG2440 Ferredoxin-like protein + Prom 138919 - 138978 1.6 133 71 Tu 1 . + CDS 139019 - 140278 1236 ## COG0477 Permeases of the major facilitator superfamily + Term 140310 - 140347 2.7 - Term 140295 - 140335 7.1 134 72 Tu 1 . - CDS 140344 - 141318 611 ## COG0657 Esterase/lipase - Prom 141343 - 141402 4.7 + Prom 141572 - 141631 5.7 135 73 Tu 1 . + CDS 141781 - 142185 273 ## NT01EI_2969 DNA-binding transcriptional activator CaiF + Term 142197 - 142244 10.5 + Prom 142363 - 142422 5.4 136 74 Op 1 33/0.000 + CDS 142454 - 143482 534 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 137 74 Op 2 35/0.000 + CDS 143482 - 144471 805 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 138 74 Op 3 8/0.071 + CDS 144471 - 145220 230 ## PROTEIN SUPPORTED gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 139 74 Op 4 3/0.357 + CDS 145242 - 146063 860 ## COG0500 SAM-dependent methyltransferases 140 74 Op 5 2/0.411 + CDS 146060 - 146920 186 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 + Prom 146924 - 146983 2.2 141 75 Op 1 . + CDS 147018 - 148991 1897 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 142 75 Op 2 . + CDS 149141 - 149788 376 ## COG2258 Uncharacterized protein conserved in bacteria + Term 149795 - 149839 7.8 143 76 Tu 1 . - CDS 149850 - 150743 548 ## COG0583 Transcriptional regulator - Prom 150905 - 150964 3.4 + Prom 150749 - 150808 4.5 144 77 Tu 1 . + CDS 150830 - 151615 698 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 145 78 Tu 1 . - CDS 151718 - 152731 577 ## COG0583 Transcriptional regulator - Prom 152889 - 152948 6.3 + Prom 152865 - 152924 3.8 146 79 Op 1 11/0.018 + CDS 153077 - 153985 263 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 147 79 Op 2 3/0.357 + CDS 153982 - 154587 253 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase + Term 154611 - 154639 2.3 148 79 Op 3 . + CDS 154647 - 156098 715 ## COG0471 Di- and tricarboxylate transporters + Term 156128 - 156162 5.2 - Term 156120 - 156146 -0.7 149 80 Tu 1 . - CDS 156239 - 157000 579 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 157027 - 157086 1.5 150 81 Tu 1 . - CDS 157170 - 157703 141 ## COG1988 Predicted membrane-bound metal-dependent hydrolases - Prom 157832 - 157891 6.2 - Term 158070 - 158102 2.0 151 82 Tu 1 . - CDS 158139 - 159260 1047 ## COG2850 Uncharacterized conserved protein - Prom 159287 - 159346 3.8 - Term 159377 - 159419 12.4 152 83 Tu 1 . - CDS 159438 - 161315 1424 ## COG0754 Glutathionylspermidine synthase - Prom 161461 - 161520 5.1 - Term 161528 - 161563 7.4 153 84 Tu 1 . - CDS 161577 - 162497 686 ## COG0657 Esterase/lipase - Prom 162734 - 162793 3.5 - Term 162781 - 162837 -0.2 154 85 Op 1 5/0.268 - CDS 162864 - 163505 247 ## COG3381 Uncharacterized component of anaerobic dehydrogenases 155 85 Op 2 7/0.107 - CDS 163492 - 166002 1641 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 156 85 Op 3 . - CDS 166050 - 167183 545 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit - Prom 167362 - 167421 4.0 157 86 Tu 1 . + CDS 167374 - 168849 606 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 169006 - 169062 -0.4 - Term 169467 - 169526 0.3 158 87 Tu 1 . - CDS 169546 - 170343 526 ## SBO_4355 hypothetical protein - Prom 170385 - 170444 2.9 - Term 170380 - 170420 4.1 159 88 Op 1 . - CDS 170487 - 171332 746 ## plu0136 hypothetical protein - Term 171348 - 171381 2.1 160 88 Op 2 . - CDS 171419 - 171805 194 ## EcE24377A_3353 hypothetical protein 161 88 Op 3 . - CDS 171862 - 172221 220 ## EcolC_3445 hypothetical protein 162 88 Op 4 . - CDS 172246 - 172467 239 ## EcolC_3444 hypothetical protein 163 88 Op 5 . - CDS 172481 - 172960 224 ## COG2003 DNA repair proteins 164 88 Op 6 . - CDS 172972 - 173421 373 ## EcolC_3442 antirestriction protein 165 88 Op 7 . - CDS 173454 - 174275 569 ## ECO103_5084 hypothetical protein - Prom 174510 - 174569 4.5 - Term 174424 - 174486 11.7 166 89 Tu 1 . - CDS 174573 - 175559 236 ## - Prom 175683 - 175742 5.5 167 90 Tu 1 . + CDS 176198 - 176839 201 ## PMI3479 hypothetical protein 168 91 Tu 1 . + CDS 176946 - 177161 241 ## COG3311 Predicted transcriptional regulator + Prom 177307 - 177366 2.4 169 92 Tu 1 . + CDS 177403 - 177903 168 ## ECS88_2074 hypothetical protein - Term 177773 - 177807 -0.3 170 93 Op 1 . - CDS 178045 - 178338 150 ## 171 93 Op 2 . - CDS 178343 - 178774 262 ## CYA_1992 S24 family peptidase (EC:3.4.21.-) + Prom 178978 - 179037 8.2 172 94 Op 1 . + CDS 179062 - 179649 483 ## CKR_2303 hypothetical protein 173 94 Op 2 27/0.000 + CDS 179691 - 181298 1338 ## COG0286 Type I restriction-modification system methyltransferase subunit 174 94 Op 3 11/0.018 + CDS 181298 - 182485 551 ## COG0732 Restriction endonuclease S subunits 175 94 Op 4 . + CDS 182544 - 185459 2141 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases + Term 185463 - 185502 10.7 + Prom 185607 - 185666 8.0 176 95 Op 1 . + CDS 185763 - 186158 149 ## Sputcn32_3526 hypothetical protein 177 95 Op 2 . + CDS 186158 - 186988 99 ## EC55989_3314 hypothetical protein + Prom 187004 - 187063 4.7 178 96 Op 1 5/0.268 + CDS 187157 - 188797 333 ## COG1401 GTPase subunit of restriction endonuclease 179 96 Op 2 . + CDS 188801 - 190237 250 ## COG4268 McrBC 5-methylcytosine restriction system component + Term 190388 - 190423 5.1 - Term 190168 - 190208 2.2 180 97 Tu 1 . - CDS 190431 - 190907 179 ## Pecwa_0460 hypothetical protein 181 98 Op 1 . - CDS 191336 - 191752 301 ## - Term 191761 - 191795 6.0 182 98 Op 2 . - CDS 191807 - 192694 568 ## COG3596 Predicted GTPase - Prom 192798 - 192857 4.7 - Term 192849 - 192895 -0.8 183 99 Tu 1 . - CDS 193037 - 193327 230 ## gi|183597546|ref|ZP_02959039.1| hypothetical protein PROSTU_00824 - Prom 193368 - 193427 6.3 - Term 193348 - 193399 3.3 184 100 Tu 1 . - CDS 193452 - 194723 384 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 - Term 194882 - 194909 0.1 185 101 Tu 1 . - CDS 195058 - 195321 61 ## - Prom 195371 - 195430 2.8 - Term 195359 - 195401 -0.5 186 102 Tu 1 . - CDS 195437 - 195901 206 ## COG1396 Predicted transcriptional regulators - Prom 195944 - 196003 4.0 + Prom 195965 - 196024 3.3 187 103 Tu 1 . + CDS 196168 - 196638 223 ## UTI89_C0291 hypothetical protein - Term 196629 - 196671 6.8 188 104 Op 1 . - CDS 196688 - 197536 257 ## GAU_0079 hypothetical protein 189 104 Op 2 . - CDS 197550 - 198110 267 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 198142 - 198201 2.4 + Prom 198235 - 198294 1.7 190 105 Tu 1 . + CDS 198320 - 198751 138 ## Clim_1762 hypothetical protein + Prom 199350 - 199409 3.7 191 106 Op 1 . + CDS 199502 - 200080 167 ## gi|290511296|ref|ZP_06550665.1| conserved hypothetical protein + Prom 200091 - 200150 2.8 192 106 Op 2 . + CDS 200177 - 200728 285 ## AB57_2683 hypothetical protein + Term 200738 - 200780 7.3 193 107 Tu 1 . + CDS 201082 - 201414 136 ## ECH74115_5790 nipsnap family protein + Term 201662 - 201703 0.5 - Term 201476 - 201519 7.3 194 108 Tu 1 . - CDS 201551 - 203455 667 ## COG0582 Integrase - Prom 203650 - 203709 4.6 - TRNA 203545 - 203629 79.1 # Leu CAA 0 0 + Prom 203715 - 203774 3.8 195 109 Tu 1 . + CDS 203953 - 204360 355 ## COG4460 Uncharacterized protein conserved in bacteria + Term 204372 - 204402 3.0 - Term 204359 - 204389 3.0 196 110 Tu 1 . - CDS 204416 - 205336 1052 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 205402 - 205461 3.9 + Prom 205516 - 205575 5.8 197 111 Tu 1 . + CDS 205663 - 206814 625 ## COG1680 Beta-lactamase class C and other penicillin binding proteins + Term 206843 - 206873 2.1 - Term 206825 - 206868 2.4 198 112 Op 1 22/0.000 - CDS 206889 - 207959 886 ## COG0795 Predicted permeases 199 112 Op 2 . - CDS 207959 - 209059 840 ## COG0795 Predicted permeases + Prom 209487 - 209546 4.3 200 113 Tu 1 . + CDS 209735 - 211246 1372 ## COG0260 Leucyl aminopeptidase + Prom 211276 - 211335 3.0 201 114 Op 1 5/0.268 + CDS 211375 - 211824 363 ## COG2927 DNA polymerase III, chi subunit 202 114 Op 2 . + CDS 211853 - 214708 3132 ## COG0525 Valyl-tRNA synthetase + Term 214739 - 214775 8.0 - Term 214725 - 214761 8.0 203 115 Op 1 4/0.304 - CDS 214797 - 215975 1279 ## COG0183 Acetyl-CoA acetyltransferase 204 115 Op 2 4/0.304 - CDS 215987 - 217309 985 ## COG2031 Short chain fatty acids transporter 205 115 Op 3 21/0.000 - CDS 217306 - 217971 665 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 206 115 Op 4 1/0.536 - CDS 217968 - 218633 590 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit - Prom 218711 - 218770 5.4 - Term 218786 - 218841 11.4 207 116 Op 1 13/0.018 - CDS 218902 - 220296 1119 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 208 116 Op 2 . - CDS 220293 - 222167 1004 ## COG0642 Signal transduction histidine kinase - Prom 222207 - 222266 5.7 + Prom 222500 - 222559 4.5 209 117 Tu 1 . + CDS 222655 - 223158 397 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 223174 - 223207 4.1 - Term 223028 - 223078 -0.0 210 118 Op 1 1/0.536 - CDS 223197 - 224594 938 ## COG0833 Amino acid transporters 211 118 Op 2 1/0.536 - CDS 224641 - 225744 1048 ## COG3457 Predicted amino acid racemase 212 118 Op 3 1/0.536 - CDS 225746 - 227167 1096 ## COG0531 Amino acid transporters - Term 227173 - 227209 8.0 213 118 Op 4 . - CDS 227224 - 228621 1356 ## COG0019 Diaminopimelate decarboxylase - Prom 228717 - 228776 6.5 + Prom 228674 - 228733 6.9 214 119 Tu 1 . + CDS 228815 - 230260 959 ## COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains + Term 230276 - 230311 6.5 - Term 230264 - 230299 2.7 215 120 Tu 1 . - CDS 230354 - 231982 1343 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 232130 - 232189 7.8 - Term 232159 - 232198 7.5 216 121 Tu 1 . - CDS 232225 - 232656 712 ## COG3076 Uncharacterized protein conserved in bacteria - Prom 232758 - 232817 5.9 + Prom 232737 - 232796 7.3 217 122 Tu 1 . + CDS 232833 - 233840 836 ## COG0078 Ornithine carbamoyltransferase 218 123 Tu 1 . - CDS 233880 - 234356 440 ## COG2731 Beta-galactosidase, beta subunit - Prom 234389 - 234448 7.8 219 124 Op 1 9/0.036 - CDS 234498 - 236147 1337 ## COG0366 Glycosidases 220 124 Op 2 . - CDS 236205 - 237620 1226 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 237759 - 237818 2.1 221 125 Tu 1 . - CDS 237847 - 239031 515 ## COG0738 Fucose permease - Prom 239090 - 239149 5.6 + Prom 239036 - 239095 10.8 222 126 Tu 1 . + CDS 239170 - 239880 404 ## COG1737 Transcriptional regulators + Term 239881 - 239917 1.0 - Term 239869 - 239905 5.0 223 127 Op 1 2/0.411 - CDS 239913 - 241292 1088 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 224 127 Op 2 . - CDS 241306 - 242877 1004 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 242904 - 242963 4.4 - Term 243297 - 243353 3.2 225 128 Op 1 8/0.071 - CDS 243471 - 244670 1024 ## COG0247 Fe-S oxidoreductase 226 128 Op 2 9/0.036 - CDS 244667 - 245938 1237 ## COG3075 Anaerobic glycerol-3-phosphate dehydrogenase 227 128 Op 3 . - CDS 245928 - 247583 1359 ## COG0578 Glycerol-3-phosphate dehydrogenase - Prom 247726 - 247785 6.4 228 129 Tu 1 . + CDS 248031 - 249386 1355 ## COG2271 Sugar phosphate permease + Term 249406 - 249447 7.1 + Prom 249434 - 249493 2.9 229 130 Tu 1 . + CDS 249531 - 250607 1191 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Term 250633 - 250664 4.1 230 131 Tu 1 . + CDS 251005 - 251283 396 ## + Prom 251300 - 251359 2.9 231 132 Tu 1 . + CDS 251487 - 252098 509 ## COG0625 Glutathione S-transferase + Term 252117 - 252149 -1.0 + Prom 252112 - 252171 1.6 232 133 Op 1 7/0.107 + CDS 252201 - 253604 1163 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 233 133 Op 2 . + CDS 253601 - 255469 1650 ## COG3276 Selenocysteine-specific translation elongation factor 234 134 Tu 1 . + CDS 255655 - 257190 1338 ## COG1012 NAD-dependent aldehyde dehydrogenases + Prom 257264 - 257323 6.4 235 135 Tu 1 . + CDS 257344 - 258537 891 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component - Term 258547 - 258580 6.1 236 136 Tu 1 . - CDS 258603 - 258989 547 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 259026 - 259085 5.3 - Term 259063 - 259105 2.1 237 137 Op 1 19/0.000 - CDS 259185 - 259649 511 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 238 137 Op 2 . - CDS 259665 - 260600 843 ## COG0540 Aspartate carbamoyltransferase, catalytic chain - Prom 260836 - 260895 4.5 - Term 260675 - 260703 3.0 239 138 Tu 1 6/0.161 - CDS 260947 - 262908 1653 ## COG1289 Predicted membrane protein - Term 262921 - 262967 7.8 240 139 Op 1 . - CDS 263000 - 263923 874 ## COG1566 Multidrug resistance efflux pump 241 139 Op 2 . - CDS 263943 - 264146 200 ## ROD_45731 hypothetical protein + Prom 264419 - 264478 7.2 242 140 Tu 1 . + CDS 264560 - 265480 679 ## COG0583 Transcriptional regulator - Term 266060 - 266098 7.2 243 141 Op 1 4/0.304 - CDS 266165 - 267610 1487 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs 244 141 Op 2 4/0.304 - CDS 267618 - 268466 811 ## COG0388 Predicted amidohydrolase 245 141 Op 3 5/0.268 - CDS 268471 - 272274 2480 ## COG3164 Predicted membrane protein 246 141 Op 4 8/0.071 - CDS 272317 - 273786 1385 ## COG1530 Ribonucleases G and E 247 141 Op 5 7/0.107 - CDS 273776 - 274369 528 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 248 141 Op 6 19/0.000 - CDS 274416 - 274904 465 ## COG2891 Cell shape-determining protein 249 141 Op 7 22/0.000 - CDS 274904 - 275980 876 ## COG1792 Cell shape-determining protein 250 141 Op 8 2/0.411 - CDS 276138 - 277181 1226 ## COG1077 Actin-like ATPase involved in cell morphogenesis - Prom 277223 - 277282 5.4 251 142 Tu 1 . - CDS 277623 - 279524 1206 ## COG2200 FOG: EAL domain - Prom 279669 - 279728 3.9 + Prom 279702 - 279761 5.9 252 143 Tu 1 . + CDS 279820 - 280797 903 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases + Term 280850 - 280882 1.0 + Prom 280870 - 280929 3.8 253 144 Op 1 13/0.018 + CDS 280968 - 281969 753 ## COG2041 Sulfite oxidase and related enzymes 254 144 Op 2 1/0.536 + CDS 281999 - 282598 513 ## COG2717 Predicted membrane protein + Prom 282676 - 282735 3.1 255 145 Op 1 9/0.036 + CDS 282841 - 283293 402 ## COG0757 3-dehydroquinate dehydratase II 256 145 Op 2 27/0.000 + CDS 283386 - 283847 505 ## COG0511 Biotin carboxyl carrier protein 257 145 Op 3 6/0.161 + CDS 283859 - 285208 1364 ## COG0439 Biotin carboxylase + Term 285231 - 285270 2.1 + Prom 285272 - 285331 6.3 258 146 Op 1 4/0.304 + CDS 285366 - 285608 331 ## COG3924 Predicted membrane protein 259 146 Op 2 3/0.357 + CDS 285598 - 287055 1185 ## COG4145 Na+/panthothenate symporter 260 146 Op 3 . + CDS 287066 - 287947 1415 ## PROTEIN SUPPORTED gi|227114012|ref|ZP_03827668.1| ribosomal protein L11 methyltransferase + Term 287962 - 288006 4.5 261 147 Tu 1 . - CDS 287975 - 288454 341 ## COG4405 Uncharacterized protein conserved in bacteria - Prom 288581 - 288640 3.3 262 148 Op 1 12/0.018 + CDS 288765 - 289769 1080 ## PROTEIN SUPPORTED gi|145637283|ref|ZP_01792944.1| ribosomal protein L11 methyltransferase 263 148 Op 2 . + CDS 289751 - 290047 392 ## COG2901 Factor for inversion stimulation Fis, transcriptional activator + Prom 290369 - 290428 2.7 264 149 Tu 1 . + CDS 290459 - 291955 1326 ## COG4690 Dipeptidase + Term 291975 - 292012 0.5 + Prom 292086 - 292145 2.9 265 150 Tu 1 . + CDS 292209 - 292940 625 ## COG2186 Transcriptional regulators + Term 293018 - 293060 2.9 + Prom 292971 - 293030 2.5 266 151 Op 1 2/0.411 + CDS 293062 - 293961 442 ## COG3734 2-keto-3-deoxy-galactonokinase 267 151 Op 2 2/0.411 + CDS 293958 - 294608 429 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 268 151 Op 3 1/0.536 + CDS 294605 - 295480 347 ## COG3386 Gluconolactonase 269 151 Op 4 21/0.000 + CDS 295503 - 296903 1032 ## COG0477 Permeases of the major facilitator superfamily 270 151 Op 5 . + CDS 296937 - 298283 733 ## COG0477 Permeases of the major facilitator superfamily 271 152 Op 1 2/0.411 + CDS 298415 - 300124 1418 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 272 152 Op 2 3/0.357 + CDS 300127 - 301023 580 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 273 152 Op 3 . + CDS 301039 - 301812 191 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 301844 - 301871 -0.1 + Prom 302059 - 302118 5.1 274 153 Tu 1 . + CDS 302191 - 302607 350 ## ETAE_3157 hypothetical protein + Term 302616 - 302652 0.9 - Term 302647 - 302681 4.3 275 154 Op 1 8/0.071 - CDS 302702 - 304138 1130 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 276 154 Op 2 3/0.357 - CDS 304178 - 305689 1222 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 305830 - 305889 5.2 277 155 Tu 1 . - CDS 305930 - 306406 408 ## COG1737 Transcriptional regulators - Prom 306562 - 306621 2.9 278 156 Tu 1 . - CDS 306672 - 306887 68 ## SbBS512_E3230 putative IS1 encoded protein Predicted protein(s) >gi|316917754|gb|ADCU01000021.1| GENE 1 506 - 1069 491 187 aa, chain - ## HITS:1 COG:YPO1074 KEGG:ns NR:ns ## COG: YPO1074 COG0241 # Protein_GI_number: 16121375 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Yersinia pestis # 1 187 1 187 188 317 78.0 1e-86 MAQLVPAIFLDRDGTINVDHGYVHESDNFQFIDGVIDAMAELKKMGFALVLVTNQSGIAR GMFTEDQFMHLTEWMDWSLADRGVDLDGVYYCPHHPEGTVEEFRQACDCRKPQPGMLLSA QEELNIDMSASYIVGDKIEDLLAGEAAGVATKILVRTGKPVTPEAESKADFVINSLADLP KVIKQRF >gi|316917754|gb|ADCU01000021.1| GENE 2 1261 - 2292 824 343 aa, chain + ## HITS:1 COG:YPO1073 KEGG:ns NR:ns ## COG: YPO1073 COG1135 # Protein_GI_number: 16121374 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Yersinia pestis # 1 343 1 343 343 558 83.0 1e-159 MIKLTNITKVFQQGQRQIKALSDVSLHVPAGQIYGVIGSSGAGKSTLIRCVNLLERPTSG TVLVGDQDMTALSESALTKARRQIGMIFQHFNLLSSRTVAGNIALPLELDNTPRDEITRR VSELLDLVGLSDKKDAYPANLSGGQKQRVAIARALASNPQVLLCDEATSALDPATTRSIL ELLKDINRRLGLTILLITHEMDVVKRICDQVAVISDGQLIEQGTVGEVFSHPKTPLAQQF IHSTLHLDIPDDFAARMTPDRKPDTQPLLRLEFTGQSVDAPLISQAVRRFNVDISILSSQ MDYAGGVKFGVMLAELHGDDADALSAIEFFKNHQVKVEVLGYV >gi|316917754|gb|ADCU01000021.1| GENE 3 2285 - 2938 682 217 aa, chain + ## HITS:1 COG:STM0246 KEGG:ns NR:ns ## COG: STM0246 COG2011 # Protein_GI_number: 16763635 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 217 1 217 217 293 90.0 2e-79 MSEAMMWLMGRGIWETVVMTFVSGFFGFVIGLPVGVLLYITRPGQIWENAKLYSLLSALV NIFRSIPFIILLVWMIPFTRIIVGTSIGLQAALVPLTVGAAPFIARMVENALLEIPTGLI EASRAMGATPMQIISKILLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYG YIGYDATVMNTVLVLLVILVYLIQFSGDRIVKAVSHK >gi|316917754|gb|ADCU01000021.1| GENE 4 3048 - 3863 945 271 aa, chain + ## HITS:1 COG:yaeC KEGG:ns NR:ns ## COG: yaeC COG1464 # Protein_GI_number: 16128190 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli K12 # 1 271 1 271 271 479 92.0 1e-135 MSLKFKSIAVVGALLGSLALAGCGQEEKDPNHIKVGVIVGAEQQVAEVAQKVAKDKYGLD VELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQIKDRGYKLVPVGSTFVYPIAGYSKK IKSLSELQDGSQVALPNDPTNLGRSLLLLQKVGLIKLKDGIGLLPTVLDVTENPKKLKLV ELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIFVEDKDSPYVNLIVAREDNKDA ENVKKFVQAYQSDEVYEAANKIFNGGAVKGW >gi|316917754|gb|ADCU01000021.1| GENE 5 3977 - 4396 315 139 aa, chain + ## HITS:1 COG:no KEGG:SG0248 NR:ns ## KEGG: SG0248 # Name: rcsF # Def: outer membrane lipoprotein # Organism: S.enterica_Gallinarum # Pathway: Two-component system [PATH:seg02020] # 1 139 1 134 134 148 62.0 6e-35 MRALPLCLLAASLALSGCSLLHTKSETKTPVEPVKTQTNTTKTTKTTQQRARPVKVYENA EDLVGKPFRDLGEVTGSVCQATAQDAAPNLATARKRMQIKASTMKANAVLLHQCEIVTDT PSCYQQAVCKGSALNVSQQ >gi|316917754|gb|ADCU01000021.1| GENE 6 4393 - 5100 543 235 aa, chain + ## HITS:1 COG:YPO1069 KEGG:ns NR:ns ## COG: YPO1069 COG1720 # Protein_GI_number: 16121370 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 233 1 233 235 367 77.0 1e-102 MSQFSFNTIGLIRSPYKEKFAIPRQPGLVEDGGGELELIAPYNQPESVRGLEEFSHLWIM FVFHQTMDGGWRPTVRPPRLGGNMRMGVFATRSTFRPNPIGMSLVELKSVETQGSKVCLK LGSLDLVDGTPVIDIKPYLPFAESQPQARGGFAQNAPLADMCVVFSDVAQQQILQQRSRY PHLERFIRQVLAQDPRPAYRKGENEERVYAVHLLDFNVRWHVKDGITEVIDLNSV >gi|316917754|gb|ADCU01000021.1| GENE 7 5222 - 6940 1771 572 aa, chain + ## HITS:1 COG:YPO1068 KEGG:ns NR:ns ## COG: YPO1068 COG0442 # Protein_GI_number: 16121369 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Yersinia pestis # 1 572 1 572 572 1015 86.0 0 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWMPTGLRVLKKVENIVREE MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDMVRN EISSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFVMKDAYSFHTSQESLQETYDKMFAA YSKIFSRMDLDFRPVQADTGSIGGNASHEFQVLAQSGEDDVVFSSESDFAANIELAEAVA PKGERAAPTEELRIVDTPNAKTIAELTEQFNLPIEKTVKTLLVHATKESGHTLVALLVRG DHELNEVKAEKLEMVASPLTFATEAEIRTVVNAGPGSLGPINMAVPVVADRTVAMMSDFG AGANIDGKHYFGINWERDLPLPLVADIRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTK YTEALKATVQGEDGRNQLMTMGCYGIGVTRVVAAAIEQNHDERGIIWPDAIAPFQVAILP MNMHKSFRVKDLAESLYNSLRSKGIDVIMDDRKERPGVMFADMELIGVPHTVVIGDRNLD SDEIEYKNRRNGEKQMIKTGEIEDFLLAQIKR >gi|316917754|gb|ADCU01000021.1| GENE 8 7020 - 7529 357 169 aa, chain - ## HITS:1 COG:YPO0457 KEGG:ns NR:ns ## COG: YPO0457 COG3045 # Protein_GI_number: 16120786 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 5 155 7 155 155 256 83.0 1e-68 MNKYFVGICFSVAAAFTSAHAEQIGSVDTVFKILGPDHKIVVEAFDDPDIKNVTCYISRA KTGGIKGGLGLAEDTADAAISCQQVGPIAISEKIKNKKSDGEVVFRKRTSLVFKKLQVVR FYDPARNALVYLTYSDKVVDGSPKNAISAVPIMPWATPETSVSAAPAAQ >gi|316917754|gb|ADCU01000021.1| GENE 9 7741 - 8619 717 292 aa, chain + ## HITS:1 COG:YPO0456 KEGG:ns NR:ns ## COG: YPO0456 COG2207 # Protein_GI_number: 16120785 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 1 289 1 288 288 437 75.0 1e-122 MDQASIIRDLLSWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKEVTGQAIGAYIRARRLS KAAVALRLTSRPILDIALQYRFDSQQTFTRAFKKQFNQTPALYRRAEDWHAYGMCPPIRL GLSNLVQPEFITLPSTSLVGITQCYTCTLEQISKVRTELRSQFWHDFLHDVKNLPPVLYG LHHSRASLEKDDEQEVLYTTALEIQHLPPDVTKEVQSITLLGGEYAQFCYNGPAEGFQDF ILGLYGTTLPTLNLVRRKGYDIERFHPQADSSQRPPQHICCEYLIPIRREED >gi|316917754|gb|ADCU01000021.1| GENE 10 8616 - 9263 622 215 aa, chain - ## HITS:1 COG:ECs5353 KEGG:ns NR:ns ## COG: ECs5353 COG0406 # Protein_GI_number: 15834607 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 309 73.0 3e-84 MTQVYLIRHGETEWNAERRIQGQSNSPLTELGELQARQVAARLSQMGITHVIASDLGRTR QTGLAIAEACGCELILDSRLRELHMGVLEERLLDSLTPEEEKWRKQMVDGTPDARIPEGE SMAELATRMRAALNSCLDLPAGSQPALVSHGIALGALLGTILGLPPYAERRLRLRNCSLS RVDYQQSPWLAPGWVVESAGDIHHLDRPALDEIQR >gi|316917754|gb|ADCU01000021.1| GENE 11 9316 - 9849 488 177 aa, chain + ## HITS:1 COG:YPO0454 KEGG:ns NR:ns ## COG: YPO0454 COG1986 # Protein_GI_number: 16120783 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 172 1 172 180 263 73.0 1e-70 MYHVVAATTNPAKIKAISLAFDDVFGHDQYRIEGVEVDSGVPEQPIGNHETRTGSRHRVM CARQVCPEADFWVGIEAGIEENMTFAWMTIENHHMRGESRSASLMLPEVILQGIAEGRAL GSEMKGITGVSDIGRREGAIGVFTNGILTRTSVYHQALVLALVPFHNEIFQQNCVKK >gi|316917754|gb|ADCU01000021.1| GENE 12 9917 - 10243 295 108 aa, chain - ## HITS:1 COG:YPO0453 KEGG:ns NR:ns ## COG: YPO0453 COG2973 # Protein_GI_number: 16120782 # Func_class: K Transcription # Function: Trp operon repressor # Organism: Yersinia pestis # 5 108 21 124 125 122 74.0 2e-28 MINRSLTDPALSAQENDDWQRFVELLRQAFAEDLQGPMLQLFLTPDERTALATRVRIIEE LMKGEISQRELKSQLGAGIATITRGSNSLKTAPADLKAWLEQQLLSDK >gi|316917754|gb|ADCU01000021.1| GENE 13 10338 - 12266 1515 642 aa, chain - ## HITS:1 COG:YPO0452 KEGG:ns NR:ns ## COG: YPO0452 COG0741 # Protein_GI_number: 16120781 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Yersinia pestis # 7 642 4 639 639 917 71.0 0 MVMADNWRAWGIGLCLVAVSGSSFADSLDAQRQRYLQVKQAWDSNQMMTVNQLMPTLRDY PLYPYLEYRQLTQDLGQATTIEIKDFIARNPTLPPAKSLPARYVNELSRRQDWTGLLVFS PQPPKPIAARCNYYYAQYATGHQKTAWDGARDIWLSGQSLPTNCDKLFDAWKASGDQTPL TVLERMRLALKKGNNGLVSFLAKQLPADYKTMGDALASLQADPRNVEAFARNVGPTDFTR DATEIAFSSLARQDADSARAMLPTLVRLQKIDAKQRQAMEDSIAWRLMGNDATTEDIQWR DNVIKNSNSASLIERRVRLALGNGNKKEIRTWLALLPQDVRDKDEWRYWNATVMIEDGKR SEGESILRALTQQRGFYPMVAAQKLGITYPLQVEVANKPTAALTKDPAIDRIRELMYWNM DNTARSEWVSLVSSKSKQDQAALARYAYEQNWADLSVQATITAKLWDHLEERFPMAWPQQ FRQATEDKGISQSYSMAIARQESAWNPKAQSPVGASGLMQVMPKTAEHTAQMFNLSNYMN SSQLLDPVTNIQIGTSYLEYVYQSLGRNRILSSAAYNAGPSRVNTWLGNTGGRVDAVAFI ESIPFSETRGYVKNVLAYDAYYRYFMKRPTKILTDAEWERRY >gi|316917754|gb|ADCU01000021.1| GENE 14 12528 - 12740 233 70 aa, chain - ## HITS:1 COG:YPO3643 KEGG:ns NR:ns ## COG: YPO3643 COG1278 # Protein_GI_number: 16123785 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Yersinia pestis # 1 70 1 70 70 113 84.0 9e-26 MSNKMTGLVKWFNADKGFGFISPADGSKDVFVHFSAIQSDSYKSLDEGQSVEFTIENGAK GPAAANVVAL >gi|316917754|gb|ADCU01000021.1| GENE 15 13305 - 14972 1904 555 aa, chain + ## HITS:1 COG:ECs5349 KEGG:ns NR:ns ## COG: ECs5349 COG0488 # Protein_GI_number: 15834603 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 555 1 555 555 1018 91.0 0 MAQYVYTMHRVGKIVPPKRHILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDTEIE GEARPQPGIKIGYLPQEPKLNPEQTVREAVEEAVGEVKRALTRLDEVYALYADPDADFDK LAKEQGELEAIIQSHDGHNLDNQLERAADALRLPAWDAQIANLSGGERRRVAICRLLLEK PDMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITHDRYFLDNVAGWILELDRGEGIPW EGNYSSWLEQKDQRLAQEASAEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNNV EYQKRNETSELFIPPGPRLGDKVLEVQNLSKSYGDRLLIEDLSFSLPKGAIVGIIGPNGA GKSTLFRMISGKEQPDSGTIDLGETVVLASVDQFRDSMDDKKTVWEEVSNGQDIMRIGNF EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETL RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGA EALEPHRIKYKKMTK >gi|316917754|gb|ADCU01000021.1| GENE 16 15040 - 15921 581 293 aa, chain - ## HITS:1 COG:mlr7606 KEGG:ns NR:ns ## COG: mlr7606 COG0583 # Protein_GI_number: 13476319 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 1 284 7 293 299 181 37.0 1e-45 MALFALVVECGSFTSAALRAGLPKSSVSQRVSNLEQQLGLRLLNRTTRQLNLTFAGERYL VHCREMIQAAERADLSLQRLKDNPSGRLRITAPAGIGATLLAHVCSDFRLSYPEVSLEIF ISDVMRDLVQEGFDVALRTGKPQDSSLVGRRLGYSPRYLLASPSYLAQHPELEHPKQLER HQCIAHRAWHEWVLQRGGEFYRWELPMDHAADNLLYVRECVLAGAGITLLPAFLSQELVE QGRLVRVLPQWEAEGNELYLVYPSRKLNSPALDRFIEMALNHASFAEYNQALR >gi|316917754|gb|ADCU01000021.1| GENE 17 16065 - 17066 935 333 aa, chain + ## HITS:1 COG:BH0738 KEGG:ns NR:ns ## COG: BH0738 COG0604 # Protein_GI_number: 15613301 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Bacillus halodurans # 26 332 28 337 339 300 50.0 4e-81 MTITAIAVNPASPQEFTVIHPQISAPTDYDLLVEVKAVSINPVDTKVRANLIKNGLEQPR ILGWDASGVVISVGSKVSGFSIGDEVWYAGDITRPGSNSTQQLIDSRIVSRKPKSMNWAQ AAAMPLTTLTAWEGLFERLKVQDADADKTLLIIGGAGGVGSLAISLAALNSKVKVIATAS NKSSAQWCLERGADLTVDWHDLKSGLAEQNIKQVDYIFCLNDTDGHWAAISDLIAPQGQI CTIVENSHPLDQSALKMKSAALHWEFMYTRSMFNTPDIAEQGKILHQVAVLVDEGKLQGT LSDTLQGFSIENLEKAHNKVAEGRMRGKMVIEF >gi|316917754|gb|ADCU01000021.1| GENE 18 17111 - 17968 821 285 aa, chain - ## HITS:1 COG:no KEGG:Ent638_0663 NR:ns ## KEGG: Ent638_0663 # Name: not_defined # Def: putative periplasmic protein # Organism: Enterobacter_638 # Pathway: not_defined # 20 282 18 262 264 295 57.0 2e-78 MSKIRYFLIAASMLALPLSALAQQVFEQPEQAAQALVKAIADNDSEALKNILGDDWRQYL PEDSVEQTAVDRFLRDWQVSHHIEQQGDSAYLNVGDNNWQLPLPMVKIHNGWSFDMQKAA DEIDTRHIGRNELSAIGAMSAFVDAQKEYWAHGMNQYAQKIISSDGKKDGLYWPVKEGEA PSPLGPAFGQDHPGTDYHGYYYRILSAQGASAKGGELSYLDNGKMTKGFAMLAWPVAYGH SGIMSFMVNQDGVVYQRDLGIDSDALARKISLFDPDKNWQVVQSH >gi|316917754|gb|ADCU01000021.1| GENE 19 17985 - 19763 864 592 aa, chain - ## HITS:1 COG:no KEGG:SG0159 NR:ns ## KEGG: SG0159 # Name: yacH # Def: hypothetical protein # Organism: S.enterica_Gallinarum # Pathway: not_defined # 1 564 1 513 540 310 42.0 1e-82 MSMSFKPSMIALLCGIGVVAVAGTVLVKNGYISWQQPKAAETQPETPPVAPAVKTFTQPQ LDQLVAPIALYPDPVLAQILMASTYPSNVVQAVQWSRDNPKAQGDSAVKLVANQPWDPSV KSLVALPQLLALMGENPEWVQNLGDAFLAQPDDVMNTVQKLRQAAQKNGSLTSNAQQKVI VQPAKNTVSGHSASKSTTVVESQPQTIIIQPTNPQVVYVPSYNPNVVYGTWATPAYPPVY LPPPPGEVFTNSLVSGIGFGIGVATTYALFSSLDWGDDHHDDHHHDDDHHHDDHHDDGHH DDYHGGGNYHQGNNYVNNSHVNINVNNYNHITGGNIGGATQWQHNPAYRGGVPYHDPATS QKFISGATQANVGGSSAKKVDLSSLHTQDGNPSVLSGQTHSPASQNLKAIAQRDNLRGFD NGTTHMTGTDGQRQNAAAVFNQQTQHHSSGVATANQPDQRRHNAESVLHERAQPSAPARQ SIHPSVNPSVNQHPVAAKNSGEQRPAHSNQMGETHFSAAQNHSQQHNNPQTVNQFNQQQH ANLFSGNASSAPNWHQQQERGNQSLQRMNSAPTHHAPSRPLPEPNNLPLHRR >gi|316917754|gb|ADCU01000021.1| GENE 20 20292 - 21533 1152 413 aa, chain - ## HITS:1 COG:nadR_3 KEGG:ns NR:ns ## COG: nadR_3 COG3172 # Protein_GI_number: 16132207 # Func_class: H Coenzyme transport and metabolism # Function: Predicted ATPase/kinase involved in NAD metabolism # Organism: Escherichia coli K12 # 224 408 1 185 187 353 90.0 3e-97 MSQFDYLKTAIKQKGCTLQQVADASGMTKGYLSQLLNEKIKSPSAQKLEAIHRFLDIEFP RKAKSVGVVFGKFYPLHTGHIYLIQRACSQVDELHVILCHDEPRDRDLFENSAMSQQPTV SDRLRWLLQTFKYQKNIRIHSFDEQGIEPYPHGWKVWSDGMKAFMTENGITPSVIYSGDS QDAPVYHEFFGMETMLIDPERSFMNISGGQIRHDPFRYWEYIPTEVKPFFVRTVAILGGE SSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEMALQYSDYDKIALGHAQYIDFAVK YANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLIILLENNTPWVADGLRSLG SSAERREFQELLEQMLRKNNMEFVRVESSDYDERFLRCVELVKQMLGENTDQA >gi|316917754|gb|ADCU01000021.1| GENE 21 21626 - 23008 1277 460 aa, chain - ## HITS:1 COG:YPO0443 KEGG:ns NR:ns ## COG: YPO0443 COG1066 # Protein_GI_number: 16120774 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Yersinia pestis # 1 460 1 460 460 842 92.0 0 MAKAIKRAFVCNECGADYPRWQGQCSACQAWNSITEVRLAASPAVARAERLSGYAGDAGV SKVQKLSEISLEALPRFSTGFAEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLS QQMKTLYVTGEESLQQVAMRAHRLGLPTDGLNMLSETSIEQICLIAEQEQPKLMVIDSIQ VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGEEITSGSSV MVVWEGTRPLLVEIQALVDTSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV NVVGGVKVTETGADLALLMSLVSSLRDRPLPQDLVVFGEVGLAGEVRPVTSGQERISEAA KHGFKRAIVPHANMPKKPLPNMQVFGVKKLSDALDVLQDL >gi|316917754|gb|ADCU01000021.1| GENE 22 23188 - 24213 726 341 aa, chain - ## HITS:1 COG:YPO0442 KEGG:ns NR:ns ## COG: YPO0442 COG0560 # Protein_GI_number: 16120773 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Yersinia pestis # 17 339 1 323 326 521 78.0 1e-148 MLGFVVAIEVFKGVVVMPNSLTYCDLPAEIYRWPGLPLSLSGDEVMPLDYRAGHTGWLLY GRNLDKTALCAFQRRLGAAMVVVTAWCIEDYQVIRLAGNLPARAKKLADEQGLDIATLGK IPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGVGEEVSAVTERAMRGELDFKASLRERVG KLKDTDVSVLETVRATLPLMPGLSSLIRKLQSLDWHVAIASGGFTYFADHLRDRFELVDA VSNHLEVKDGKLTGKVIGPIVDAQYKADTLLKLAEKLEIPLSQTVAIGDGANDLKMIQAA GLGVAFHAKPKVYAQASVAIRHADLMGVLCVLSASLKHEER >gi|316917754|gb|ADCU01000021.1| GENE 23 24277 - 24981 443 234 aa, chain + ## HITS:1 COG:YPO0441 KEGG:ns NR:ns ## COG: YPO0441 COG3726 # Protein_GI_number: 16120772 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein affecting hemolysin expression # Organism: Yersinia pestis # 1 215 1 215 233 287 76.0 1e-77 MVKAKIKFRLHRTAIVLICLALLVLLMQGASYFSLSHQMARSEQVEELAQTLAEQVSDRL IPLMNTGNDDPDSEKITQILNRLTEHSRILDASVYDVDGTMVARSGEKVAVRDRLALDGK RAGSYFNHQIVQMISTKDGPIGFLRMTLDTHVLATESQQVDNTTNLLRLMMLLSLAIGII LARSLLQTRRSRWQQSPYLLTANTPVEEDPEEQSDADSTTESPQSSAKDQKKHL >gi|316917754|gb|ADCU01000021.1| GENE 24 25496 - 26365 812 289 aa, chain - ## HITS:1 COG:YPO3547 KEGG:ns NR:ns ## COG: YPO3547 COG0313 # Protein_GI_number: 16123691 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Yersinia pestis # 1 288 1 289 299 476 87.0 1e-134 MNQDDQAVISAATLYVVPTPIGNRGDITQRALDTLKAVDLIAAEDTRHTGLLLQHFAINA RLFALHDHNEQQKADQLIAKLQEGQSIALVSDAGTPLINDPGYHLVRRCREAGIRVVPLP GACAAITALCASGIASDRFCYEGFLPAKTKSRKDTLLALLEEPRTLIFYESTHRLIDSLK DMVEVMGRDRYVVLARELTKTWENIHGAPVGELLDWVLEDDMRRRGEMVLIVEGHKADED ALPAEALRTLALLQKELPLKKAAALAAEIHGVKKNALYKYALENAEGDK >gi|316917754|gb|ADCU01000021.1| GENE 25 26428 - 28470 1721 680 aa, chain + ## HITS:1 COG:YPO3548 KEGG:ns NR:ns ## COG: YPO3548 COG3107 # Protein_GI_number: 16123692 # Func_class: R General function prediction only # Function: Putative lipoprotein # Organism: Yersinia pestis # 1 679 1 656 657 754 65.0 0 MLSSLIVRTKSGRIIPVVLAAMLMAGCPGRAPQTPAADIQAEATSSSEYYLQQMQQSSDD NKADWQLLAIRALIREGKLPQAAELLGKLPQELTDVQRQEQHLVSAELYIAQKNMPNASA ILSKLNIDSLSDSQKARYYQAVIDASQGKASLPVIRAYIAQEPLLNDKQRVQNINGTWAA LTQLTQADLNSLVINADENILQGWLDLLRLYQDNKQDPSLLKAAIKDWQTRYPNNPASKV LPTALDNVLNFKQASTSNVALLLPMNGQAQVFANAIQAGFNAAKNGAITQSAPTQPQPAA APSDANATQPTTTDPNANGAVSTSGAQPAAETAPTAQADADGMPIAPIVPPSASNAQIKV YDTSSQPLPALLAQAKQDGATLVVGPLLKENVDQLSTTSTPLNVLALNQPEQVQNNPNIC YFALSPENEARDAAKHIWEQGKRSPLILAPRGSLGDRVAKAFAQEWQQLGGSTVLQQGFG STGELRQAINGGSGIRMTGQPVSVAAASQPQSVTIAGLTIPAPPADAGAVSTSSGNVDAV YIIATPAELTLIKPMIDLANGSRNGLGLYASSRSYQAGSGPDFRLEMDGLQFSDIPLLAG GNPALLQQAASQFKNDYSLVRLYAMGADAWVLANHFSQMRQIGGFQLNGSTGVLSADSNC VINRKLPWLQYRSGTIVPMQ >gi|316917754|gb|ADCU01000021.1| GENE 26 28428 - 28841 255 137 aa, chain + ## HITS:1 COG:YPO3549 KEGG:ns NR:ns ## COG: YPO3549 COG0792 # Protein_GI_number: 16123693 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Yersinia pestis # 21 133 2 114 117 151 65.0 3e-37 MASVPLRNHRSDAIVGKPKSNRRQIGAQYELLARQYLERAGLRFYAANVTLRGGELDLIM CDGDIWVFIEVRYRKSSLYGDAAASVSYTKQRRLLRSAAIWLAERDGSFETTDCRFDVLA ITGSQLQWLPNAFTATE >gi|316917754|gb|ADCU01000021.1| GENE 27 28878 - 29468 348 196 aa, chain + ## HITS:1 COG:ECs4030 KEGG:ns NR:ns ## COG: ECs4030 COG0279 # Protein_GI_number: 15833284 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 360 96.0 1e-100 MLERIKGCFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFA ASMINRYETERPSLPAIALNADNVVLTAIGNDRLHDEVYAKQVRALGHAGDVLLAISTRG NSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGQQDVEIRIPSHRSARIQEMHMLTVN CLCDLIDNTLFPHQDD >gi|316917754|gb|ADCU01000021.1| GENE 28 29479 - 30075 591 198 aa, chain + ## HITS:1 COG:ECs4031 KEGG:ns NR:ns ## COG: ECs4031 COG2823 # Protein_GI_number: 15833285 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Escherichia coli O157:H7 # 12 198 6 191 191 228 78.0 7e-60 MTKRSPLTRCFPIALVVMSALLLQGCIAAAVVGSAAVATKTATDPRSVGTQVDDGTLEAR VSNALGKDEQLKKEARIVATAYQGTVLLTGQAPSADLGARAKQIAMGVDGTNAVYNEIRT GKPVSLGTASSDTWITTKVRSQLLTSDAVKSSNVKVTTENGEVFLLGLVTQEEGQAAAKT ASQVSGVKHVTTAFTILK >gi|316917754|gb|ADCU01000021.1| GENE 29 30164 - 30901 672 245 aa, chain - ## HITS:1 COG:YPO3552 KEGG:ns NR:ns ## COG: YPO3552 COG0744 # Protein_GI_number: 16123696 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Yersinia pestis # 18 245 14 241 241 330 72.0 1e-90 MSKGRGQKHGLLGRVRIWSQSVILGVIGVWLAGIVIFAFLPVPFSAVMVERQFGAWITGD FGYVAHQDWVPMDEISPYMALAVIAAEDQKFPQHWGFDLGAIESVIDGSEKGDKPVRGAS TISQQTSKNLFLWDGRSWIRKGLEAGLTLGTEVVWTKRRILTVYLNIVEFGPGVFGVEEA ARRYFHKPASRLTASEAALLAAVLPNPHRFSVKAPSGYVLRRQQWILRQMRQLGGESYLK QNKLN >gi|316917754|gb|ADCU01000021.1| GENE 30 30898 - 31551 638 217 aa, chain - ## HITS:1 COG:YPO3553 KEGG:ns NR:ns ## COG: YPO3553 COG3155 # Protein_GI_number: 16123697 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in an early stage of isoprenoid biosynthesis # Organism: Yersinia pestis # 1 217 1 217 217 312 72.0 4e-85 MKRVGVVLSGCGVFDGAEIHESVLTLLALDRAGAQVHFFAPDKPQMHVINHLTGEESSES RNVLVESARIARGNIKPLSQADAGELDALIVPGGFGAAKNLSSFATQGAECSVDAELQRL VQQMQQAGKPLGFICIAPALLPKLLGVHTRLTIGNDPDTAEAIDAMGGEHVVCPVDDIVV DLDQKVVTTPAYMLANSIGEAAQGIEKLVARVLELAE >gi|316917754|gb|ADCU01000021.1| GENE 31 31944 - 34286 2317 780 aa, chain - ## HITS:1 COG:YPO3555_1 KEGG:ns NR:ns ## COG: YPO3555_1 COG0642 # Protein_GI_number: 16123699 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 1 525 1 524 524 843 83.0 0 MKQIRVLAQYYVDLMVKLGLVRFSILLASVLVILAIVVQMAVTMLLRGEVESIDVVRSVF FGLLITPWAVYFLSVVVEQLEESRQRLSKLVNKLEEMRYRDLELNQQLKNNISQLNQEIA EREKAEDARLQVLDTLQHEIDQREQAQIELEQQSALLRSFLDASPDLVYYRNENEEFSGC NRAMELLTGKSEKQLIGLKPEDVYDEDIAKKVIETDEKVFRHNVSLTYEQWLVYPDGRKA CFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALENASRDKTTFISTISHELRTPLNG IVGLSRILLDTELNQEQLNYLKTIHVSAITLGNIFNDIIEMDKLERRKVQLDNQPIDFTG FLTDLENLSGLLVQPKKLDFTLEHQPNLPHKILADGTRLRQILWNLIGNAVKFTQKGGVN VKVWRETGGKLFFEVKDSGIGIPQDEQDKIFAMYYQVKDQNGGKPATGTGIGLAVSKRLA QNMGGDIVVRSTPGEGSCFTLSIDAPVVEEALSPQPEDEELPLPALHVLLVEDIELNVIV ARSVLEKLGNSVDVAMTGQQALDMFTPGEYDLVLLDIQLPDMTGLDIARSLCENYGDDDL PPLVALTANVLKDKKEYLDAGMDDVLSKPLSVPALTAMIKKFWDEAPKAKEKKVESKKVT QNTEDLLDTDMLQQYIDLVGPQLIYQSLDMFEKMMPGYLAVLESNMTARDQKGITEEGHK IKGAAGSVGLRHLQQVAQQIQTSSLPAWWDNVQEWVDELKHEWRHDVKVLRDWADKATKK >gi|316917754|gb|ADCU01000021.1| GENE 32 34588 - 35490 617 300 aa, chain - ## HITS:1 COG:ECs4090 KEGG:ns NR:ns ## COG: ECs4090 COG1242 # Protein_GI_number: 15833344 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 300 1 300 309 500 77.0 1e-141 MQLQQLVNMFGADLQRRYGEKIHKLTLHGGFNCPNRDGTLGRGGCTFCNVASFADEQMQR QSIAEQLAAQARKVNRANRYLAYFQAYTSTYAEVCTLKNMYEEALQQADMVGICVGTRPD CVPDSVLDLLSEYRDKGYEVWLELGLQSAQDKTLKRINRGHDFTCYQKTTRAARERGLKV CSHLIVGLPGEGKEECMRTLEQVVNTGVDGIKLHPLHIVTGSTMAKAWQAGRLRELPLTE YVTIAGEMIRHTPMDIVYHRISASARRPTLLAPLWCENRWTGMVELNRYMLEFGGQASGL >gi|316917754|gb|ADCU01000021.1| GENE 33 36183 - 40640 4196 1485 aa, chain + ## HITS:1 COG:YPO3557_2 KEGG:ns NR:ns ## COG: YPO3557_2 COG0069 # Protein_GI_number: 16123701 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Yersinia pestis # 378 1168 1 794 794 1467 88.0 0 MLYDASLEKDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQ KPDRFFRMVAEERGWRLAKNYAVGMIFLSQDESEARASRRIVEEELQNETLSVIGWREVP INSDVLGEIALSSMPRIEQIFVNAPAGWRPRDMERRLFVARRRIEKRIEDKDFYVCSLSN LVTIYKGLCMPADLPRFYLDLADLRLESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGEI NTITGNRQWARARTYKFKTPLIPDLQDAAPFVNETGSDSSSLDNMLELLLSGGMDIVRSM RLLVPPAWQNNPDMDADLRAFFDFNSMHMEPWDGPAGIVMSDGRFAACNLDRNGLRPARY VITKDKLITCASEVGIWDYQPDEVLEKGRVGPGELMVIDTRSGRILHSAETDDDLKSRHP YKEWMERNVKRLVPFEDLPDDQVGQRELNDDELLTFQKQFGYSSEELDQILRVLGENGQE ATGSMGDDTPFAVLSSRPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLSTSIGREMNVFS EAEGQAHRLNFKSPILLYSDFTQLTTQDSEHYRAETLDLTFDPQQTDLQQAIHALCEEAE QKVRGGAVLLVLSDRNISAERLPVPAPMAVGSIQQRLVEKNLRCDANIIVETASARDPHH FAVLLGFGATAIYPYLAYETLAKLADSHAIDKKYRDVMLNYRNGINKGLYKIMSKMGIST IASYRCSKLFEAVGLHREVSNLCFPGVVSRIGGAGFSDFQQDLQNLSKRAWLKRKPLDQG GLLKFVHDGEYHMYNPDVVNTLQAAVKSGEYEDYQKYAKLVNERPVSTLRDLLQITPKGE TIAVDSVEPASELFKRFDTAAMSIGALSPEAHEALAEAMNGLGGFSNSGEGGEDPARYKT NKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVP GVTLISPPPHHDIYSIEDLAQLIFDLKQVNPKALISVKLVSEPGVGTIATGVAKAYADLI TIAGYDGGTGASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIK AAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDEKLRRNHFHGLPERVANYFQ FIARETRELMAELGVTRLVDLIGRTDLLLELDGFTAKQNKLDLSALLKTAEPKPDKAVYC TESNPSFDKGLLNKELLAQVQANIEAKQSKTVFFDIRNTDRSVGASLSGAIAEQHGDQGL ASDPIKAQFTGTAGQSFGVWNAGGVELTLTGDANDYVGKGMAGGKIVVRPPVGSAFRSHE ASIIGNTCLYGATGGKLFAAGRAGERFAVRNSGAITVVEGIGDNGCEYMTGGIVCVIGRT GINFGAGMTGGFAYVLDEDGEFRKRVNPELVEVLSMDQLAIHEEHLRGLITEHVQLTGSS RGEEILAHWPEWAPKFALIKPKSSDVKALLGHRSRSAAELRVQAQ >gi|316917754|gb|ADCU01000021.1| GENE 34 40655 - 42073 1213 472 aa, chain + ## HITS:1 COG:YPO3558 KEGG:ns NR:ns ## COG: YPO3558 COG0493 # Protein_GI_number: 16123702 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Yersinia pestis # 1 472 1 472 472 889 88.0 0 MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSETQAKSQADRCLSCGNPYCEWKCP VHNYIPNWLKLANEGRIMEAADLAHQTNSLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIG NIERYINDKALAMGWKPDMSHVQPTGKRVAVIGAGPAGLACADVLARNGVQAVVFDRHPE IGGLLTFGIPAFKLEKEVMTKRREIFTGMGIEFRLNTEVGKDVPISELLNEYDAVFLGVG TYQSMRGGLENEDASGVFDALPFLIANTKQLMGYDASEEEPYISMEGKRVVVLGGGDTAM DCVRTSIRQGATQVTCAYRRDEENMPGSKREVKNAREEGVEFMFNLQPLSLELNSSGRVC GVKMVRTELGEPDAAGRRIAQPIAGSEHVLDADAVVMAFGFRPHSMSWLAEHDVNLDKQG RIIAPEGSHNAFQTSNPKIFAGGDAVRGSDLVVTAIAEGRKAAEGIMSYLEV >gi|316917754|gb|ADCU01000021.1| GENE 35 42264 - 42944 382 226 aa, chain + ## HITS:1 COG:STM1129 KEGG:ns NR:ns ## COG: STM1129 COG3010 # Protein_GI_number: 16764486 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Salmonella typhimurium LT2 # 1 226 1 226 226 336 80.0 2e-92 MSLLADLEQRVREQGGLIVSCQPVPDSPMDRPEIVTAMAQAAVSAGAVAIRIEGITNLKA VRPHISVPIIGIVKRDLEDSPVRITPYLSDIDALAEAGADIIAFDATFRSRPVEIDDLLA RIRHHGLLAMADSSTREEGLECQQKGVEFIGTTLSGYTGGEIPDEPDLTMVSELSNAGCR VIAEGRYNSPALAAKAIEQGAWAVTVGSAITRIEHICQWFSQAIKR >gi|316917754|gb|ADCU01000021.1| GENE 36 42901 - 43839 296 312 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 18 307 1 319 319 118 28 2e-25 MNISANGLAKPLSANWELMMNILAIDIGGTKLAAALINADQQISQRQEISTPASSSPQAL TTALTQLVSHYQGQAHCVAVASTGIIDNGILTALNPDNLGGLNQFPLQNTLENLTKLPCY LLNDAQAAAWAEYSQLAEQFRHIVFITVSTGVGGGIVINGKLLTGPHAFAGHIGHSLADP NGPRCGCGRTGCVEAIASGRAIAAAAQLELQGKNARQIFAEAQNGNPQAQRLVENSAQSI CQLIANLKALLDTECIVLGGSVGLASGYLQQVKQQLSLLPTPFHVPIVAAHYQHDAGLIG AALFAAQAHSVQ >gi|316917754|gb|ADCU01000021.1| GENE 37 43852 - 44322 361 156 aa, chain + ## HITS:1 COG:YPO3019 KEGG:ns NR:ns ## COG: YPO3019 COG2731 # Protein_GI_number: 16123198 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Yersinia pestis # 13 154 8 149 151 148 50.0 4e-36 MILGKISDLSVQTGLSSSLRAIIKQALTRDLATLDAGRYIIDGEDIFINVMAFDTSAAES KRYELHREYLDIQILLSGTERIDFGLEGSAQQPDIYHEDDDYQLCDSLEQRQTLHMVPGM FAIFLPNEPHKPGCMVNDSQKIKKAVIKVHHTLLAN >gi|316917754|gb|ADCU01000021.1| GENE 38 44499 - 45380 690 293 aa, chain + ## HITS:1 COG:STM1127 KEGG:ns NR:ns ## COG: STM1127 COG1737 # Protein_GI_number: 16764484 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 293 1 293 293 441 81.0 1e-124 MESQALRLKPGKILDTLGAMQNSLTRVAQRIAHYILQSPLRVTQLSIAELSRETQAGEAT VIRFCRTLGYKGFQDFKMDLAIELATSDAEASSPLLDAEIAASDDAHTIGRKLQNTINNV LSETLNLLDMQQVSLVVDALRNSQSVYIFGVGSSGITAEDMKHKLMRIGLRVDAVTNNHF MYMQATLLKAGDVAIAISHSGDSNETVHALKLAKQAGATTVALTHNLGSPLSETADFSLI NGNRQGTLQGDSMGTKTAQLFVIDLLYTLLVQAAPEQARETKLRTMAALNLSK >gi|316917754|gb|ADCU01000021.1| GENE 39 45452 - 45934 426 160 aa, chain - ## HITS:1 COG:YPO3560 KEGG:ns NR:ns ## COG: YPO3560 COG2969 # Protein_GI_number: 16123704 # Func_class: R General function prediction only # Function: Stringent starvation protein B # Organism: Yersinia pestis # 1 160 6 171 171 192 68.0 3e-49 MSPRRPFLLRAFYEWLLDNQLTPHLVVDVNRHGVMVPMEFARDGQIVLNIAPRAVGNLEL GDDAVRFNARFGGVPRNVYVPISAVMAIYSRENGAGTMFEPEPAYENEMPLMSVEDEEAS SEPSMTVIDGNLPDSSTESDDDGDEPTPPPRGRPSLRVVK >gi|316917754|gb|ADCU01000021.1| GENE 40 45952 - 46593 690 213 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase [Haemophilus influenzae R2866] # 1 203 1 203 212 270 64 5e-71 MAVAANKRSVMTLFSGPTDIFSHQVRIVLAEKGVSVEIEQVEMDNLPQDLIDLNPYRTVP TLVDRELTLYESRIIMEYLDERFPHPPLMPVYPVARGESRLMMHRIENDWYSLLHKIEKG TAQEADNARKQLREELLAIAPVFTQKPFFMSDEFSLVDCYLAPLLWRLPVLGIELSGAGS KELKIYMTRVFERDAFLASMTEAEREMRLHTRG >gi|316917754|gb|ADCU01000021.1| GENE 41 46940 - 47332 648 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50119267|ref|YP_048434.1| 30S ribosomal protein S9 [Pectobacterium atrosepticum SCRI1043] # 1 130 1 130 130 254 99 4e-66 MAETQYYGTGRRKSSAARVFIKPGSGNIVINQRSLEQYFGRETARMVVRQPLELVDMVGK FDLYITVKGGGISGQAGAIRHGITRALMEYDESLRGELRKAGFVTRDARQVERKKVGLRK ARRRPQFSKR >gi|316917754|gb|ADCU01000021.1| GENE 42 47348 - 47791 745 147 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238896727|ref|YP_002921472.1| ribosomal protein L13 [Klebsiella pneumoniae NTUH-K2044] # 1 147 21 167 167 291 96 1e-78 MGKLLMKTFTAKPETVKRDWYVVDADGKTLGRLATELARRLRGKHKAEYTPHVDTGDYII VLNAEKVAVTGNKRSDKIYYHHTGHIGGIKQATFEEMIARHPERVIEIAVKGMLPKGPLG RAMYRKLKVYAGNEHNHAAQQPQVLDI >gi|316917754|gb|ADCU01000021.1| GENE 43 48068 - 49216 875 382 aa, chain - ## HITS:1 COG:YPO3564 KEGG:ns NR:ns ## COG: YPO3564 COG1485 # Protein_GI_number: 16123708 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Yersinia pestis # 11 382 5 375 375 564 74.0 1e-160 MPSNRTTSVMTPAMLYQQALDAGDYQPDAVQRQTVDALTIIQQALIEKENATPPSESGGL RGRLQRLWGKPTSKQQVPVQGLYMWGGVGRGKTWLMDMFFHSLPGERKLRLHFHRFMLRV QEELVALQGHENPLEIIADGFKAETDVLCFDEFFVSDITDAMLLGTLLQALFARGITLVS TSNIPPDNLYYNGLQRARFLPAIDLIKQYCTVMNVDAGIDYRLRTLTQAGLYFSPMNNET RHHMDEMFAKLAGNVGEINPVLEINHRPLPALCRSSGVLAVEFSVLCEDARSQLDYIALS RSYHTVFLHHVKKMDKLNENAARRFLALVDEFYERHVKLIISAELSMFEIYQGEHLKFEY QRCLSRLQEMQSEDYLRLEHLP >gi|316917754|gb|ADCU01000021.1| GENE 44 49500 - 49895 514 131 aa, chain + ## HITS:1 COG:STM3347 KEGG:ns NR:ns ## COG: STM3347 COG3105 # Protein_GI_number: 16766642 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 126 3 129 134 184 79.0 4e-47 MTWEYALIGLVVGIVIGAVAMRFGNRKLRQQQVLQNELEKSKNELEQYRQELVSHFAHSA ELLDNMANDYRQLYQHMAKSSNNLLPDMPPQDNPFRYRLTEADNDQAPVEFPPRDYSEGA SGLLRAERRDK >gi|316917754|gb|ADCU01000021.1| GENE 45 50070 - 51401 1294 443 aa, chain + ## HITS:1 COG:YPO3566 KEGG:ns NR:ns ## COG: YPO3566 COG0265 # Protein_GI_number: 16123710 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Yersinia pestis # 2 443 1 457 457 557 70.0 1e-158 MMKKKSLLLSTLALSMGLTMLSAPIANATLPPIVAGQNVPSLAPMLEKVLPAVVSVHVEG MQNTKPTPETKGGERQFEGLGSGVIIDAAKGYVLTNNHVISNATTIKVQLNDGREYVAKL IGRDEQSDIALIQLTDAKNLTAIKIADSDKLRVGDFAVAVGNPFGIGQTATSGIVSALGR SGLNLEGLENFIQTDAAINRGNSGGALINLNGELIGINTAILAPGGGNVGIGFAIPSNMA QSLSAQLIKYGEVKRGVLGIRGREMTADLAQAFKLEAQRGAFVNEVLPNSAAAKAGIKAG DVITALDGNPLSSFAELRAKIGSAAPGTVLKLGLLRNGKPLVIPVTLENSGVTTTQAENI SPALQGATLSDGDVKGTPGIKIDDVVKGSVAAQMGMHKGDLIIGVNSERIRDIASLRKAL AANPPVIALHMLRNGEGLYLLIR >gi|316917754|gb|ADCU01000021.1| GENE 46 51523 - 52599 932 358 aa, chain + ## HITS:1 COG:ECs4108 KEGG:ns NR:ns ## COG: ECs4108 COG0265 # Protein_GI_number: 15833362 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Escherichia coli O157:H7 # 1 355 1 352 355 447 68.0 1e-125 MFTKILRSVFLGFVVAIILLIAVPSLRPAGLFSLFKTASFEESPVSYNSAVKRAAPAVVN VYNGSMSNNGQGNNGLAIKTLGSGVIMDSKGYILTNKHVVSGADQIVVALQDGRVFEAML VGSDTLTDLAVLKIEATNLPVITINPSRVPHIGDVVLAIGNPYNIGQTTTQGIISATGRV GLSTYGHQNFLQTDASINHGNSGGALVNTLGELVGINTLSLDKSNDGETPEGIGFAIPTA LSSKIMAKLIRDGRVIRGFIGVSGREIAPARNQPQANAMERIQGIIVRDVAANGPAANAG IQPGDIVLNVDGKPAVSAAETMDQVAEIRPGTVVPVIIMRNGERMTLSVTIEEFPNVD >gi|316917754|gb|ADCU01000021.1| GENE 47 52679 - 53938 1254 419 aa, chain - ## HITS:1 COG:YPO3569 KEGG:ns NR:ns ## COG: YPO3569 COG0766 # Protein_GI_number: 16123713 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Yersinia pestis # 1 419 1 420 420 742 91.0 0 MDKFRVQGPTRLSGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLSQL GVRVERNGSVHVDASNVNELCAPYDLVKTMRASIWALGPLVARFGYGQVSLPGGCAIGAR PVDLHITGLEQLGAEIKLEEGYVKASVDGRLKGAHIVMDKVSVGATVTIMSAATLAEGTT VIENAAREPEIVDTANFLNTLGAKISGAGTDRITIEGVARLGGGVYRVLPDRIETGTFLI AAAVTRGKIICRNTRPDTLDAVLAKLREAGADIEVGEDWISLDMHGERPKAVTVRTAPHP GFPTDMQAQFSLLNLVAEGTGVITETIFENRFMHIPELIRMGAHAEIEGNTAICYGVEKL SGAQVMATDLRASASLVIAGCVAEGTTIVDRIYHIDRGYDRIENKLSALGANIERVKGE >gi|316917754|gb|ADCU01000021.1| GENE 48 54005 - 54259 321 84 aa, chain - ## HITS:1 COG:YPO3570 KEGG:ns NR:ns ## COG: YPO3570 COG5007 # Protein_GI_number: 16123714 # Func_class: K Transcription # Function: Predicted transcriptional regulator, BolA superfamily # Organism: Yersinia pestis # 1 84 4 87 87 147 88.0 4e-36 MDNNEIKDVLMNALSLQEAHVTGDGSHFQVIVVGEQFAGMSRVKKQQTVYAPLMEYIADN RIHALSIKAFTPEEWQRDRKLNAL >gi|316917754|gb|ADCU01000021.1| GENE 49 54559 - 54873 299 104 aa, chain - ## HITS:1 COG:YPO3571 KEGG:ns NR:ns ## COG: YPO3571 COG3113 # Protein_GI_number: 16123715 # Func_class: R General function prediction only # Function: Predicted NTP binding protein (contains STAS domain) # Organism: Yersinia pestis # 3 95 2 94 100 79 48.0 2e-15 MAANVLQWRSEEDTLKLIGILDRDSLMSFWDDRHTLLEGKKRLDLSGLERVDSAGLAMLV HVQNTDATGASQIVITGVSERLRTLIALYNLNDILLTDSVLLAS >gi|316917754|gb|ADCU01000021.1| GENE 50 54873 - 55514 679 213 aa, chain - ## HITS:1 COG:YPO3572 KEGG:ns NR:ns ## COG: YPO3572 COG2854 # Protein_GI_number: 16123716 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Yersinia pestis # 1 212 1 207 207 330 77.0 1e-90 MFKRILMVALLVVAPISSTLANAAVDQTNPYKLMDAAAKQTFDRLKNEQPKIKQDPNYLR TIVHEELMPYVQVKYAGALVLGQYYRGATPAQREAYFKAFQSYLEQAYGQALAMYHGQTY NIAPERALGDATIVPIRVTIIDPQGRPPVRLDFQWRKNSQTGNWQAFDMIAEGVSMITTK QNEWASILRQNGVDGLTKQLISSAQQPITLDQK >gi|316917754|gb|ADCU01000021.1| GENE 51 55531 - 56070 506 179 aa, chain - ## HITS:1 COG:YPO3573 KEGG:ns NR:ns ## COG: YPO3573 COG1463 # Protein_GI_number: 16123717 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Yersinia pestis # 1 179 1 184 185 271 72.0 5e-73 MQTKKSEIWVGVFMLIALCAVVFLCLQVANVKSLGNEPTYRIYATFDNIGGLKARSPIKI GGVVIGRVADITLDPKTYLPRVAMDINEQYNNIPDTSSLAIRTSGLLGEQFLALNVGFED PEMGTAILKDGGTIQDTKSAMVLEDLIGQFLYKSGNDDANKKDSASGDATAPTEAPAAH >gi|316917754|gb|ADCU01000021.1| GENE 52 56075 - 56857 727 260 aa, chain - ## HITS:1 COG:YPO3574 KEGG:ns NR:ns ## COG: YPO3574 COG0767 # Protein_GI_number: 16123718 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Yersinia pestis # 1 260 1 260 260 413 88.0 1e-115 MLLNALASFGRRGINVCASFGRAGLMMFNALIGKPEFAKQWPLLRKQLYSVGVQSLLIII VSGLFIGMVLGLQGYLILTTYSAEASLGMMVALSLLRELGPVVTALLFAGRAGSAVTAEI GLMKATEQISSMEMMAVDPLRRIVAPRFWAGIISMPLLTAIFVAVGIWGGSVVGVDWKGI DSGFFWSAMQGSVDFHTDLVNCMIKSVVFAITIMWIALFNGYDAIPTSEGISRATTRTVV HSSLAVLGLDFVLTALMFGN >gi|316917754|gb|ADCU01000021.1| GENE 53 56862 - 57692 279 276 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 8 247 1 242 245 112 28 2e-23 MNQQATNLVEINGMSFSRGNRQIFTDITMTVPKGKITAIMGPSGIGKTTLLRLIGGQIRP DKGEIWFDGQNIPSLSRHKLFDARKKMSMLFQSGALFTDLTVFDNVAFPLREHTQLPESL IRTTVLMKLEAVGLRGAGGLMPSELSGGMARRAALARAIALDPEMILFDEPFVGQDPITM GVLVKLIDELNHSLGITCVVVSHDVPEVLSIADYAYIVADQRVVAQGGSKELNSNTDPRV RQFLDGIADGPVPFRYPAGDYRSALLGLAPLGSGSK >gi|316917754|gb|ADCU01000021.1| GENE 54 58144 - 59127 683 327 aa, chain + ## HITS:1 COG:YPO3576 KEGG:ns NR:ns ## COG: YPO3576 COG0530 # Protein_GI_number: 16123720 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/Na+ antiporter # Organism: Yersinia pestis # 1 319 1 317 324 370 74.0 1e-102 MLLATLLLIVGLILLVYGADRLVYGAAAIARSFGVPPMIIGMTIVGIGTSLPELTVSLTA VMNNQLNTAVGTVIGSNIANILLILGSAALLRPLSVRSDILRRELPLMLGVTILCGFVLY DNQLSLLDGVILLLTFTAFIWLMLKMARLAMREGNDPLTDEQMAELPKDTSNTVALLWIA LGLIILPLSAKMIVDNSTVIARYFGVSELVIGLTIIAIGTSLPELATSIAGAIKGEHDIV LGNIIGSNIFNILIVLGVPALISQGDTHFDPSAFGRDYWVMLGVSVVLTALCIRRKHKIG RMAGALLLCGFIAYVALLFMPHPINLY >gi|316917754|gb|ADCU01000021.1| GENE 55 59203 - 60189 876 328 aa, chain + ## HITS:1 COG:YPO3577_1 KEGG:ns NR:ns ## COG: YPO3577_1 COG0794 # Protein_GI_number: 16123721 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Yersinia pestis # 1 212 1 212 212 364 84.0 1e-100 MSHLDLQPGFDFQRVGKQVLQTEREGLAQLDQYINEDFTKSCEAILSCLGKVVVMGMGKS GHIGRKIAATLASTGTPAFFVHPGEASHGDLGMVSSHDIVLAISNSGESHEIQALIPVLK RQKVKLICMTNNPDSSMGKAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLQ ARGFTAEDFALSHPGGALGRKLLLRVSDIMHTGSELPHVSRDASLRDALLEITRKNLGLT VICDDLMKIEGIFTDGDLRRIFDLGVDLNNAKIADVMTSGGIRIRPNALAVDALNLMQAR HITSLLVADGDQLIGVVHMHDMLRAGVV >gi|316917754|gb|ADCU01000021.1| GENE 56 60216 - 60782 592 188 aa, chain + ## HITS:1 COG:YPO3578 KEGG:ns NR:ns ## COG: YPO3578 COG1778 # Protein_GI_number: 16123722 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Yersinia pestis # 8 188 7 187 187 274 76.0 8e-74 MNEQGMNIATCYGPVARKIMDCAAEIRLVICDVDGVLSDGLIYMGNNGEELKAFNVRDGY GIRCLITEGIHVAIITGRQSKLVADRATTLGIEHLYQGQSDKLIAFEKILADLNLQPHQV SYIGDDLIDWPVMAKVGLSVAVADAHPILLQRAQYVTRISGGRGAVRELCDLILQSQGKL DEAKGLSI >gi|316917754|gb|ADCU01000021.1| GENE 57 60779 - 61357 470 192 aa, chain + ## HITS:1 COG:ECs4078 KEGG:ns NR:ns ## COG: ECs4078 COG3117 # Protein_GI_number: 15833332 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 192 1 191 191 238 64.0 4e-63 MSKTKRWVILLLTIIALALIGWNLTENDSDTSQVAVNNQEPTYRSQHTLTVVYDPTGKLS YKLVAEDVQHFSEDKTSWFTHPVLTTYDQDTLPTWSIRADKAKLTDDRMLYLYGNVEVNS LTTTSQLERITTDNAQVNLVTQDVSSDDEVTLYGSNFTSHGLKMRGNMREKTARLIDKVK TYYEIQNKPQNP >gi|316917754|gb|ADCU01000021.1| GENE 58 61326 - 61955 654 209 aa, chain + ## HITS:1 COG:STM3318 KEGG:ns NR:ns ## COG: STM3318 COG1934 # Protein_GI_number: 16766613 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 184 1 182 184 253 74.0 2e-67 MKFKTNHKILSLIVAGTLLTASVPALALTGDTEQPIHIDSAQQSLDMQGNTVTFTGDVVV TQGTIKINADKVVVIRPNGAQGKEVVEGYGNPVTFYQMQDNGKPVSGHGQKLRYELDKDF VILTGNAFLQQVDSSIKGDKITYLVKQQQMEAFSDKGKRVTTVLIPSQLQDKGGKAAATP APAKPKAQNEPAASKGKSPFSQSSQTKSN >gi|316917754|gb|ADCU01000021.1| GENE 59 61962 - 62687 296 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 7 225 15 231 312 118 32 2e-25 MATLIAENLAKAYKGRRVVENVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGRI EIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVYNNLMAVLEIRDDLTKEQRADRADE LMEEFHIAHLRDNLGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKKII EHLRDRGLGVLITDHNVRETLDVCERAYIVNQGNLIAHGTPSEILDDEQVKRVYLGEEFR L >gi|316917754|gb|ADCU01000021.1| GENE 60 62820 - 64253 1267 477 aa, chain + ## HITS:1 COG:ECs4081 KEGG:ns NR:ns ## COG: ECs4081 COG1508 # Protein_GI_number: 15833335 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Escherichia coli O157:H7 # 1 477 1 477 477 725 82.0 0 MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQQALESNPLLEQDDTHDEIETST EEVNEELDTREQLEQPDMPEELPLDATWDEIYTAGTPSGTGTDYSDDELPIYQGETTQSL QDYLMWQVELTPFSDTDLAIATAIVDAVDDTGYLTSSLDDILESMGDELVMMDEIEAVLK RVQRFDPVGVAARDLRDCLLVQLSQFADDTPFLSEARLIVDKHLDLLANHDFRNLMRSTK LKEDVLKAAMQLIQTLDPRPGLSINTGESDYVIPDVLVHKHQGHWVVELNQDSVPRLKIN QHYVSLGAQTRSDSDTQFIRSNLQEAKWLIKSLESRNDTLLKVSRCIVEQQQAFFDNGAE YMKPMVLADIAQQVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVSTEDGGEASSTAI RALVKKLVAAENPAKPLSDSKLATLLADQGIMVARRTVAKYRESLSIPPSNQRKQLV >gi|316917754|gb|ADCU01000021.1| GENE 61 64277 - 64564 412 95 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|188532471|ref|YP_001906268.1| putative sigma(54) modulation protein [Erwinia tasmaniensis Et1/99] # 1 95 1 95 95 163 82 9e-39 MQLNITGHHVEITEALREFVTTKFAKLEQYFDRINQVYVVLSVEKIQHIAEATVHINGGE LHATSEQTDMYAAIDTLVDKLARQLNKHKDKLKQH >gi|316917754|gb|ADCU01000021.1| GENE 62 64659 - 65150 376 163 aa, chain + ## HITS:1 COG:YPO3585 KEGG:ns NR:ns ## COG: YPO3585 COG1762 # Protein_GI_number: 16123727 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Yersinia pestis # 10 163 1 154 160 244 81.0 4e-65 MAGLNEEDEMSNDLTMPLTSVLSPECTRNAVHCSSKKRALEIISELAAAQLNLPPQVVFD AILTRERMGSTGIGNGIAIPHGKLEEDTLRAIAVFIHLEQPISFDAIDNQPVDLLFALLV PADQCKTHLQTLAIMAQKLADKGVCRRLRSAQSDDELYKIITE >gi|316917754|gb|ADCU01000021.1| GENE 63 65293 - 66144 877 283 aa, chain + ## HITS:1 COG:STM3323 KEGG:ns NR:ns ## COG: STM3323 COG1660 # Protein_GI_number: 16766618 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Salmonella typhimurium LT2 # 1 283 1 283 284 531 94.0 1e-151 MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVELLPNLARSLADRGTSAAVSIDVRNM PESPEVLETAMDNLPDSFSPQLLFLDADRNTLIRRYSDTRRLHPLSTKNLSLESAIDEES DLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV FDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRK >gi|316917754|gb|ADCU01000021.1| GENE 64 66154 - 66426 379 90 aa, chain + ## HITS:1 COG:ECs4085 KEGG:ns NR:ns ## COG: ECs4085 COG1925 # Protein_GI_number: 15833339 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 122 77.0 2e-28 MTVKQTVEIRNRLGMHARPAMKLFELVQGFDAEVLLRNESGVEAEASSVIALLMLDSAQG GHIEVQAEGPDEDKALEAVVSLFEAGFDED >gi|316917754|gb|ADCU01000021.1| GENE 65 66622 - 67722 935 366 aa, chain - ## HITS:1 COG:STM1530 KEGG:ns NR:ns ## COG: STM1530 COG3203 # Protein_GI_number: 16764875 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 23 366 24 372 372 403 64.0 1e-112 MKISKAVVIVSILSVSGLAHAAEIYNHDGNKLDLNLKADGLHYFSKDKSADGDQSYIRFG FRGETQINDQLTGYGQWEYQVMANTPETQNDAYTRLGFAGLKYGNFGSIDYGRNYGVLYD IASWTDMLPEFGDNTYEAEDNFMTNRSSGLLTYRNSGFFGLVDGLNVAAQYQGKNGACTS DGGCSNGTSGRSISEQNGDGYGMSMTYDLGWGISAGAAYTNSNRTLQQQRSTLANGKRAE AWTAGMKYDANNVYIAATYAQTRNMTYFSGSRLQGVANKTDNWELVAQYQFDNGLRPSLA YLQSRGESIGRYGDMDLVKYADVATTYYFNKNMSAYVDYKINLLDSNNRAGLNSDNIVAT GLVYQF >gi|316917754|gb|ADCU01000021.1| GENE 66 67937 - 69856 1536 639 aa, chain - ## HITS:1 COG:STM4448_1 KEGG:ns NR:ns ## COG: STM4448_1 COG3711 # Protein_GI_number: 16767694 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Salmonella typhimurium LT2 # 2 512 1 511 513 509 52.0 1e-144 MIQFPYPRLNQVFDALREETLPQEELARRFAVSTRTVRTDITTLNDILSQYGAQFVHLRG SGYRLEILDAECFAALQQRSQASPRIPRRAKDRVTHLLLRFLAQGDPLKLDDVADSWFVS RASLQSDMADVREMIGKYGLTIESKAHYGMKLFGSENAVRACLANLLFQYPESDELFSEL RGKVLPEIDITQLREQLHLTMRQYQIRLTDEGEQQLLIYCGIILHRIRTGFLLDNLDVSD VEAVFTQAARDVAYYLEERFGCGIPETEVAYLSVQIAARRITDASRLENAVGDENHALVK HILNFINEHYNYDLRGDTQLSSDLLSHIATMMTRAKYQINIPNPLLEHIKQHYPLAYDVT LAAVSSWGKNMPYTITDNEIGYLVLHIGVGLERHYDIGYERHPQALLVCDSGMSTLRLLE TKLKREFPQLIVNQIDSLREYEKLEQIEEDFVISMVKVPEKNKPVVTVAPFPTSFQLEQL AKLVLVDRTKPYMLEKFFDASHFCVLEQPISQTELFANICQQLEEEGYVEADFRSSLVER ESIVSTMLGEGIALPHSLGLLAKKTVIYTVLAPQGVRWGNNETAYVIFLLAISKQDYEEA MAIYDLFVTFMRERTVGRLLSSTHFEQFRAIAMDCLSRS >gi|316917754|gb|ADCU01000021.1| GENE 67 70305 - 71045 709 246 aa, chain - ## HITS:1 COG:no KEGG:SeHA_C4848 NR:ns ## KEGG: SeHA_C4848 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 246 1 246 246 391 78.0 1e-107 MQLAPKFYKNRVCLNVLAGSKENAREIYEAAEGYVLVGVLSKDYPDVSSAVADMKEYSAL INNALSVGLGAGDPNQSLMVSQISAQVQPQHVNQVFTGVGTSRGMLGQNESVVNGLVSPT GIVGQVKISTGPLSSQGPDAIVPVESAIALLQDMGSSSVKYFPMGGLKCREEFGYLAKAC AAQKFWLEPTGGIDLNNFEEILKIALDAGVEKVIPHIYSSIIDKTTGNTRPEDVAQLLGM VKGLLG >gi|316917754|gb|ADCU01000021.1| GENE 68 71058 - 72173 991 371 aa, chain - ## HITS:1 COG:STM4446 KEGG:ns NR:ns ## COG: STM4446 COG1921 # Protein_GI_number: 16767692 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Salmonella typhimurium LT2 # 6 371 3 367 372 499 72.0 1e-141 MSANQSIYKKYNLKTVINTSGRMTILGVSTPREDVVEAVNFGLNHYFEVKDLINKTGRYI ADLLGVEDAVVVSCASAGIAQSVAAVIVKDNLYRLENLHAHSHDVPSEIVVPKGHNVNFG APVGTMVQLGGGTLREAGYANECSPAQLAAAITPKTAAILYIKSHHCVQKSMLDVAQAAE VAKTYQLPLIVDAAAEEDLQSYYQAGADLVIYSGAKAIEGPTSGLVIGRKQYVEWVKLQS NGIGRAMKVGKEGILGLTQAITSYMTLEKENGQQMVDKMSAFIDNLNSLKGIQAKVVWDS AGRDIARTEISFDHAALGITTQEIVDRLKNGDPAIYFRGYKANEGKIEVDVRSVNAEQLH IVYECIKALFN >gi|316917754|gb|ADCU01000021.1| GENE 69 72163 - 73296 618 377 aa, chain - ## HITS:1 COG:STM4445 KEGG:ns NR:ns ## COG: STM4445 COG3964 # Protein_GI_number: 16767691 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Salmonella typhimurium LT2 # 1 375 1 373 377 462 61.0 1e-130 MYDLIIKQGKCADGSVIDVAVNDGKIAALGELSEMISAEKTIDLQGRYFLSAGWIDAHTH CYPSSPIYSDEPDLIGVASGVTTVIDAGSTGADDIDEFYRLTRSARTNVFAFLNISRIGL LRQNELGDMNDIDDVLAHKAISEHQGFVVGIKARMSSSVVQQNGIQPLIRAKEIQAYNGS LPLMVHIGNNPPNLDEIADLLTHGDIITHCYNGKPNRILTPKGELRSAVKRALDRGVLLD VGHGSASFSFDVAEIAIKQGIYPNTISSDIYCKNRIKGPVYSLAYVMSKFLLVGLSLSQV IDCVTKNTAHALRLSNKGRLEVGCDADFTIFDVVDQAQVFADSEQQNRSGQNLILPLAAI VAGQIMLTQDGETRNVC >gi|316917754|gb|ADCU01000021.1| GENE 70 73364 - 74011 869 215 aa, chain - ## HITS:1 COG:no KEGG:YE3782 NR:ns ## KEGG: YE3782 # Name: not_defined # Def: putative inner membrane protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 215 2 216 217 313 93.0 2e-84 MDEKLKNNFWYADWSFPIFVGLLSAGVFAGTHMYYLYGIGAFNEVAFVSMLRAGIDTGSY GAVAAFGASFLFARIIEGSLVGILDIGGAIQTGVGLGVPALLLGAGFVYPVENFGASLVT GLAIGLAIGYLIILARKFTINQSNSTYGADVMMGAGNASGRFLGPLIILSAITASIPIGV GSLLGALLFYLWQKPITGGAILGAMILGSIFPVAI >gi|316917754|gb|ADCU01000021.1| GENE 71 74030 - 74806 752 258 aa, chain - ## HITS:1 COG:no KEGG:YE3783 NR:ns ## KEGG: YE3783 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 258 1 258 258 410 90.0 1e-113 MFLIILLKSIIIGGLVGVGVGAGAARMFHAPTVQGMGAFRTLGELNSCEGDPASHFSFGL GFFFNAWASSVAAGAFTQDVDHRIIPNWGAAVLLMKNRDLATTMHDPKKMAIACGIIGVI VVAFLNSTASAVPEALQITAVKVLVPAANLLVNTVMPVIFWLAAIDAGRRSGFWATIFGG LAQLIMGNAVPGLVLGILIGKGVEESGWNKVTKIMMAVIVLLFVLSGFFRGFDMKMLESF HMGVPVWLDQIHNTLSGK >gi|316917754|gb|ADCU01000021.1| GENE 72 74992 - 75378 196 128 aa, chain - ## HITS:1 COG:no KEGG:PANA_3486 NR:ns ## KEGG: PANA_3486 # Name: not_defined # Def: hypothetical protein # Organism: P.ananatis # Pathway: not_defined # 1 98 1 98 98 108 57.0 7e-23 MKDNITTTVTVSGRSDTKQKAFAAALSSIQGTLLRESKKVFLRIEPVDIKVVKAEEKITM EKFLFFFLPRKKYLYSITLDVTVNMTTVDTDKIEFKSVNTLNHSKCSKTINSTYEGGNFA NGTDQLQK >gi|316917754|gb|ADCU01000021.1| GENE 73 75382 - 75744 501 120 aa, chain - ## HITS:1 COG:no KEGG:VSAL_I0110 NR:ns ## KEGG: VSAL_I0110 # Name: not_defined # Def: hypothetical protein # Organism: A.salmonicida_LFI1238 # Pathway: not_defined # 1 120 1 120 120 165 84.0 6e-40 MTAIKVVIGDRLGKGQKVGQGVEAAGGVAVVIPGVAADMKLGDVMKKEEANLGISFCGSG GAGAITAQTKHGYKAKYGMRSIEEGVTAINEGYNVLGFGFMDKEELGQKLVEAYNKKYGS >gi|316917754|gb|ADCU01000021.1| GENE 74 75741 - 76094 298 117 aa, chain - ## HITS:1 COG:no KEGG:AHA_3910 NR:ns ## KEGG: AHA_3910 # Name: not_defined # Def: transcriptional regulator # Organism: A.hydrophila # Pathway: not_defined # 3 116 7 120 120 137 69.0 1e-31 MAEQQLLVDERILAEETDTTLEKVISLLSDKGIYPNEVQKQMLFSHVKAMVLRSHTGEAL PEVDISLFDEISPLSLSLAEQVVSWFNNLAYEEAHLLSVHFEVAKENELSCVTGESS >gi|316917754|gb|ADCU01000021.1| GENE 75 76524 - 76934 423 136 aa, chain + ## HITS:1 COG:STM0616 KEGG:ns NR:ns ## COG: STM0616 COG0782 # Protein_GI_number: 16763993 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Salmonella typhimurium LT2 # 1 136 1 136 136 192 72.0 2e-49 MSRPAIILNELDAARLDTLLEQPAFASLPVAEALNNELDRAEMLSPENMPADVVTMNSRV KFRDLSSKEEHVRTLVYPASLKDSAAELSVMAPIGAALLGLRVGDAIQWELPNGQTTHIE VLELQYQPEAAGEYHR >gi|316917754|gb|ADCU01000021.1| GENE 76 77111 - 78217 727 368 aa, chain + ## HITS:1 COG:SMa0025 KEGG:ns NR:ns ## COG: SMa0025 COG1305 # Protein_GI_number: 16262465 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Sinorhizobium meliloti # 1 365 22 370 375 283 42.0 5e-76 MNRRRFIHLSAAVSLIASTMMSVGYAASNDTVPNNETKDWQHYRVTTQVDIPATHEAVQL WLPLPDTRLGDYQRAQTPHWKVSADGKAKLILVKPYNALVLHVSWPAKAAQHSITMTQSI STRDRHIDLQTPPANPVKLSAQEMALYLQPTRYLPTDGIVAKTANQIIQGRGENNIDRAK MIYDWVVANTQRDPKTLGCGDGNVKQMLDSGNLSGKCADINALFVALARSVGIPARDAYG VRLGKSSMGFNSLGKDGDITKAQHCRAEFYMEGYGWIPVDPADVRKVMLEEQAGGLPFSD PKVQKANKWMFGGWEMNWMAYNHAHDLKLPGDAEQAAYLMYPQAQIGEQKLDGLKPDTFK YSISSVKR >gi|316917754|gb|ADCU01000021.1| GENE 77 78268 - 78786 345 172 aa, chain - ## HITS:1 COG:RSc2354 KEGG:ns NR:ns ## COG: RSc2354 COG3658 # Protein_GI_number: 17547073 # Func_class: C Energy production and conversion # Function: Cytochrome b # Organism: Ralstonia solanacearum # 9 172 11 172 175 88 36.0 7e-18 MTRGLEMRWDAMVRFTHWGVALGFLLNRLHVTKPGSDWHQVIGLAVASLVILRIIWGFTL AKGPARLSAMIPTPTSLKYHFHELKNRSVPTHLHHNPLGAIGIWLFWILLPLVALTGWAQ DTDFIDLYPVDDWHYWLVNTVTVLVCIHILAVIAMSVWLRKDLVRAMLPGKK >gi|316917754|gb|ADCU01000021.1| GENE 78 78789 - 79181 647 130 aa, chain - ## HITS:1 COG:YPO3694 KEGG:ns NR:ns ## COG: YPO3694 COG3783 # Protein_GI_number: 16123833 # Func_class: C Energy production and conversion # Function: Soluble cytochrome b562 # Organism: Yersinia pestis # 1 130 1 128 128 109 52.0 9e-25 MRKTLLVLASAAMMMGSSLVYAAGEDVGDAMDTIASNYKIALKADNPQEFKKALEGMKAG AQEAQKGTPPKLEKEPADGAKMTDFRHGLDILIGQINDAEKLADAGQFEQAKAAAEKFKD TRNTYHKKYK >gi|316917754|gb|ADCU01000021.1| GENE 79 80212 - 81552 1513 446 aa, chain - ## HITS:1 COG:YPO3692 KEGG:ns NR:ns ## COG: YPO3692 COG0312 # Protein_GI_number: 16123831 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Yersinia pestis # 1 446 1 446 446 737 82.0 0 MKVITQVAEQRKTLENAVAQALELAKAGADAAEVAVTKTTGISISTRFGEVENVEFNSDG ALGITVYHQQRKGSASSTDLSPDAIARTVQAALDIARYTSPDPFAGPADKELLAFDAPDL DLFHPAELDAERGIELAARAEQSSLKFDPRITNTEGGSFNSHYGIKVFGNSHGMLQSYSS SRHSLSSCVIAEHDGDMERDYAYTIARDINDLKSPEWVGEECARRTLSRLAPRRLPTMEA PVMFAAEVATGLFGHLVGAISGSSVYRKSTFLLDSLGKQILPEWLTINEQPHLLKGMAST PFDSEGVRTVERNIVENGVLQTWLMTSYSARKLGMQSTGHAGGIHNWRIKGQGLGFEDML KKMGTGFLVTELMGQGVSGVTGDYSRGAAGFWVENGEIQYPVSEVTIAGNLKDMWSNLVT LGDDIELRSNIQCGSALLEAMKIAGE >gi|316917754|gb|ADCU01000021.1| GENE 80 81906 - 82073 69 55 aa, chain + ## HITS:1 COG:CC3184 KEGG:ns NR:ns ## COG: CC3184 COG1724 # Protein_GI_number: 16127414 # Func_class: N Cell motility # Function: Predicted periplasmic or secreted lipoprotein # Organism: Caulobacter vibrioides # 2 55 6 59 62 59 51.0 1e-09 MLIAEIMADGCILKRVKGSHHHFTHPNKTGLVTIPHPKKDLPANTVKSIRQQAGL >gi|316917754|gb|ADCU01000021.1| GENE 81 82096 - 82506 347 136 aa, chain + ## HITS:1 COG:YPO3369 KEGG:ns NR:ns ## COG: YPO3369 COG1598 # Protein_GI_number: 16123519 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 132 1 133 135 74 34.0 6e-14 MLYPIAIESGDQHHAYGVTVPDLPGCFSAGDTLDEAIANAKQAIISHIELLVEMEADFPM PSKIEDLSNKAEYQEYIWAIVEVDVTRLMGGAEKINVTLPKSLIARIDRVVALHPEYKSR SGFLAQAALEQVTVIK >gi|316917754|gb|ADCU01000021.1| GENE 82 82611 - 83168 814 185 aa, chain + ## HITS:1 COG:YPO3691 KEGG:ns NR:ns ## COG: YPO3691 COG3028 # Protein_GI_number: 16123830 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 185 1 182 182 223 78.0 1e-58 MQKHPDEDWLDEVPENDIDKDEDDEIIWVSKSEIKRDAEALKDLGAELVDLGKNALDKIP LDADLRAAVELAQRIKKEGRRRQLQLIGKMLRQRDPEPIQIALDKLNNRHNQQVALFHKL EQIRDRLIYEGDDAISLVLELYPQADRQQLRSLIRNAKKEKATNKPPKSARQIFQYLREL SEENE >gi|316917754|gb|ADCU01000021.1| GENE 83 83248 - 83526 355 92 aa, chain - ## HITS:1 COG:YPO3690 KEGG:ns NR:ns ## COG: YPO3690 COG2732 # Protein_GI_number: 16123829 # Func_class: K Transcription # Function: Barstar, RNAse (barnase) inhibitor # Organism: Yersinia pestis # 1 92 1 92 93 98 65.0 3e-21 MNKVKFDFNHIADLPAFYRQFSHEFSLDSEFGNNLDALWDAVTGGIKLPVEIDFVNFNGH KKRRFAALVLLFEEAEEELEGALRFNMLEKTV >gi|316917754|gb|ADCU01000021.1| GENE 84 83532 - 83990 326 152 aa, chain - ## HITS:1 COG:no KEGG:ETAE_2972 NR:ns ## KEGG: ETAE_2972 # Name: not_defined # Def: guanine-specific ribonuclease N1 and T1 # Organism: E.tarda # Pathway: not_defined # 10 152 15 154 154 188 65.0 5e-47 MAKRLWTGLLIILALSGVAFLNSQAAVSSHEGKSASVSTSESIEQLTQQDRVVSYLREHQ RLPDFYITKKQARAEGWDASAGNLCSAVPGRAIGGDRFSNREKRLPQKAKRVWREADINY HCGRRQADRLIYSNDGLIYITRDHYRTFTKME >gi|316917754|gb|ADCU01000021.1| GENE 85 84250 - 85740 1279 496 aa, chain - ## HITS:1 COG:ECs3522 KEGG:ns NR:ns ## COG: ECs3522 COG1012 # Protein_GI_number: 15832776 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 17 494 2 481 482 548 54.0 1e-155 MSTAVILEAEVNPLHEKLKKNEFFKTGYFIAGQWQDASNTYEVTNPATGEVVAKVANAGQ KETQAAIRAASEALPAWRKTTAKQRSEILQNWYHLIVENKPFLAELMVAEQGKPLKEAMG EVDYAASFIQWFAEEAKRANGEIIPPVKPGSRIWATREPIGVVAAITPWNFPLAMLTRKL GPALAAGCTGLIKPANETPLCAFALLALAQKAGVPDGVLNAVSGDTLAISDAIMASKDVR KISFTGSTGVGKTLVRNAAETMKKVSMELGGNAPFIVFEDADLEAAIKGIMANKFRNAGQ VCVCINRIYLHDSIYDTFVSRLADEIRKLKVGNGMDEGVSVGPLVSEKGVDKVEQHVKDA LENGGKVMVGGQRHALGGNFFQPTLIAEANEDMLMASEETFGPVAACYRFKTEEEVIKRA NDTPFGLAAYFYTQNLSRVFRVSELLESGMIGINECSVSTEVAPFGGVKESGLGREGSTL GLEEFMEVKTLHLGNL >gi|316917754|gb|ADCU01000021.1| GENE 86 85918 - 86955 641 345 aa, chain - ## HITS:1 COG:VC0289 KEGG:ns NR:ns ## COG: VC0289 COG1609 # Protein_GI_number: 15640317 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 6 330 4 324 332 180 31.0 3e-45 MRQRSRQIIKLDDVAQQAGVSPSTVSLYIRYPEKVSERTGAKIQHAIDQLGYVHNKIASQ FTGGRSSSMAVVLPSLANIIFSRVIQQIERTVSEQGYQLSIASHDHNLEKEEAQVRAILQ WSPAVIAIAGADHKPETLKMLENSGVPVVQMWQVDGSNFSAQVGNDHIHIGYEAARFLVE SGCKKLGYFTTRFAEDIRARKRYEGFCHALAELGVSVTLVDIPRTENIYQASRETLTKTL IKERGMDGIFCTSDAIASALLMEACDRGIRVPDQLSILGFGDFPSSAWMSPVSLSSVNLN ADVIATRTAEMMLKMGSDENYHGEVCDVGFEIMPRGSTKLPIYTA >gi|316917754|gb|ADCU01000021.1| GENE 87 86986 - 88701 1404 571 aa, chain - ## HITS:1 COG:BH2222 KEGG:ns NR:ns ## COG: BH2222 COG4146 # Protein_GI_number: 15614785 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Bacillus halodurans # 5 560 4 558 580 399 43.0 1e-111 MVMVMTLSTFVLFLLIVALYSYRKTRGVSESGVDGFFLAGRGLSGYFIAGSLLLSNLSAE QLVGLNGNAYRFDISGMAWESTAAIAIIAMALFFLPRFLRRGITTMPHFLEERFDITTRR MVSIMLLVGYAVMANPCSLYLGAITMDELFDFQQITALSTQSSIAVLSLAMGAIGGIYAT AGGLKAVAVSDTISGVILLVAALLIPILGLVAIGDGALWDGARKLIADHPEQFNAIGGKN ASVPFSTIFTGMLCANLFYWCTNQMIIQRALGARSLAESQKGVLLAGIIKLLVPVVMVLP GLIAFNLFGGTLNHADFAYPALVKAVLPWWLTGMFAAAIFGTVTSHFNSIINSSATLFVI DLYGPISGCKDEKKLVRVGKIASIFFSLVSVVIAPLLLNTPNGIFDLMRRFTGFYSVPII AIVLVGFLTRRVPACAAKFTLIFHIVAYGIYTFAGLDKSLSLHFIHVMGILFVLEVGMML ILGIVKPADFHPPATNLNPIPMKKWKYANLTSVMMIAALISIYITLSPAGIADPAGIPQS YPFLIAAVWAVALMLIYWMKRRHHRSLSAAT >gi|316917754|gb|ADCU01000021.1| GENE 88 88919 - 90670 1110 583 aa, chain + ## HITS:1 COG:AGl1769 KEGG:ns NR:ns ## COG: AGl1769 COG0129 # Protein_GI_number: 15890998 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 15 583 6 574 574 659 55.0 0 MFNHDHLKRREISALRSQRWYAPNTIRAFAHRQRSQQMGYRREEFLGKPVIGIINTWSDM STCHTHLRERAEAVKRGIWAAGGFPVELPALSMGEVMVKPTTMLYRNFLAMETEELLRQH PIDGVVLLGGCDKSTPALLMGAISMDIPAIFCPAGPMSSGKWHGQVTGAGTHTKKYWDQL RLGAITQHDWIELEGAMTRSIGTCNTMGTASTMTSIADAMGFTLPGASSIPAADSRHPQM ASLCGETIVDMVWYDHKPSNWLKRENFLNGIAAYLSLGGSTNAAIHLIAMANRAKVQLTL DDMAELARHIPVLANLFPSGEKLMEEFYFAGGLLAQLSKITDFLHQESVGVTNQPVSQWL ENAHCYDDDIIRNLDNPIVPLSQGCALTVLRGNLCPNGAVMKSSAASPALRHHRGPALVF DTHQQLSDCIDDPDLDVTKDSVIILRNAGPVGAPGMPEWGNLPIPKKLLQQGVTDMVRIS DCRMSGTHYGTCILHVAPEAAVGGPLALVQTGDLIELNIDAGTLNMLVDDTTLARRRADF QPTHRVFQRSWAALYQQHVTQADEGCDFDFLQAGSDVPEPPIF >gi|316917754|gb|ADCU01000021.1| GENE 89 90680 - 91471 725 263 aa, chain + ## HITS:1 COG:STM1106 KEGG:ns NR:ns ## COG: STM1106 COG3836 # Protein_GI_number: 16764464 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Salmonella typhimurium LT2 # 2 260 3 259 263 182 40.0 8e-46 MNIFKQAITSGSVQLGTWMMTGSDTVAEAMATVGFDFLVLDQEHVAVDTLDAIRIDRAIR SVNPRITPLYRLAGNETVLIKRALDGGAMSLMIPFINTVEEAQKAIESAYYPPYGKRGFA AMHRASIWGSNPDFVAQGRDDLCLILQMETPEAIGNIAEIAKLEGVTGFFIGPGDLSAAM GYPGNPSHPEVQAMIKKGVDACVRLGKPCGIVGGNPELANKYQSMGFRFVALASDMSFLL ARAKEQLAAIRGISLTISGGEVY >gi|316917754|gb|ADCU01000021.1| GENE 90 91471 - 92355 586 294 aa, chain + ## HITS:1 COG:CC3323 KEGG:ns NR:ns ## COG: CC3323 COG2017 # Protein_GI_number: 16127553 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Caulobacter vibrioides # 5 288 4 278 281 141 34.0 2e-33 MVTLIEKSCGNLTLSVAPELGGAIAALNWRDCAILRPLQINGELRANLCGSYPLIPWSNR IAQSQFSFAGQTWQVAKNFGDHPHAIHGNGWQAAWKVTSESSNSILLEMTHDASEAWPWP YHAIQLMELSEHALRVSMTYINQAETSVPVGLGFHPFFAHASECEICFVAKKVWLNDASA LPSQESEIPKEWDYNTFRQPQFGSVDNCFTGWNGSAQIRWPRRDITATVSSDTVTNAVLF IPGAERNVVAIEPVSNINNAINLLPVGSDDRAMRLLPSGERFTVSMEIRIAEHA >gi|316917754|gb|ADCU01000021.1| GENE 91 92348 - 93220 500 290 aa, chain + ## HITS:1 COG:STM2668 KEGG:ns NR:ns ## COG: STM2668 COG3386 # Protein_GI_number: 16765983 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconolactonase # Organism: Salmonella typhimurium LT2 # 1 289 1 289 302 437 69.0 1e-122 MHKPEPLFDYQGHLPECPTWDSSTQSLYWTDILQKEIHCYRPESNQHQVIAMPEEVGCFA LREQGGFIVAMRTGIWLTDKQGSLQQKICDNPNNPQLARFNDGGTDPHGRFYAGTYWGPR DYNGALLCRVDAALKTTVIQCDILGANGLAFSPDGRWMYTSDTPNHVIYRTALDEQGQLG ERQVWKRFSLGNGRPDGAAMDSEGCYWTALFDGYRIARFSPQGELLEEHPLPVRCPTMVC FGGSQMNTLFITTTRENMSQQELLERPLSGAIFTLQVSATGIPKPKFKEN >gi|316917754|gb|ADCU01000021.1| GENE 92 93222 - 94091 838 289 aa, chain + ## HITS:1 COG:ECs4003 KEGG:ns NR:ns ## COG: ECs4003 COG2084 # Protein_GI_number: 15833257 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli O157:H7 # 4 278 8 284 299 134 32.0 1e-31 MKTIGFIGLGLMGEAMSKNIVEKFDGEVLVYDLNPKAVENLVVSGATAATSIAQIAQQAD VIISMVPRSEHVRSVYQEMLPHLHSGQITIDMSTIEPSVSEAIAKEVAKTGAIMLDAPVV KSVPAAVKAELGIYIGGDKQAWEQVHHILAMMGCNQIHMGPNGRGLVMKMIHNVMVAGIQ NSVNEMLTAAAAFDIQWPDMHQAISYGGATNFYLNSKIDSLIAANFAPAFSLQNMAKDVN IMKSMMNESGLHLPGVDVIKAVYDQGLNTGIGSEDFCATLKVVRSQSQA >gi|316917754|gb|ADCU01000021.1| GENE 93 94118 - 94885 820 255 aa, chain + ## HITS:1 COG:mll7191 KEGG:ns NR:ns ## COG: mll7191 COG1028 # Protein_GI_number: 13475991 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mesorhizobium loti # 9 251 10 256 258 226 46.0 2e-59 MNYQENVQYQSLKNKVVAITGGASGIGEELVRAYVNQGAKVAFMDFNREAGETLALELGC LFLECDVTNIEQLKSCFVQIAGKIGDVDILINNAGSDDHHKIDDITEEYFNNRINVNLRH QLFAIQAVIPGMTQKGSGSIINMGSINWMRGRPGRVCYSLSKAAIHGFTRTLSQELGARG IRVNSLVPGAIRTAKQDAMWAKLDPSAVNQFIELQALKIRLDGTHCARLALFLGSEESCG CTGQDFVVDAGLSLN >gi|316917754|gb|ADCU01000021.1| GENE 94 94895 - 95782 597 295 aa, chain + ## HITS:1 COG:ECs4801 KEGG:ns NR:ns ## COG: ECs4801 COG0730 # Protein_GI_number: 15834055 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 290 1 290 291 390 81.0 1e-108 MDFFTLLTPDGVPLETFSILVVVGVMFLYTFVGICAGFGGGLTSMPLITMVLPLKMAAPM SVIVGTGTALYATWLSRKETDWKSAAVLIIFSLLGIPVGLYALSYLPDHIMKIGLGGFII LYSFYSLFIPRLPVYDKRWIAAPMGAVAGALGAAFSTNGPPVVMYGMLRNLGPAAFRGTL NAFFTANNIAIIGGLTTSGILTISTVKLVVLCIPTMILGSIVGQYVHKRISVKVFRIMVF LLLIASGAMLIKGATGISALAALLPVFSVLVIFQVLFGKKVAAIRAADEAAKSAT >gi|316917754|gb|ADCU01000021.1| GENE 95 95875 - 97254 1291 459 aa, chain - ## HITS:1 COG:YPO1776 KEGG:ns NR:ns ## COG: YPO1776 COG0513 # Protein_GI_number: 16122030 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Yersinia pestis # 2 459 3 460 460 707 76.0 0 MTQSFASLSLPAAQLENLAELGYASMTPVQAAALPAILEGRDVRAQAKTGSGKTAAFGIG LLQQIDVTQFTTQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPISHQLDSLV HAPHIVVGTPGRIQEHLRKKSVSLDAMKVLVLDEADRMLDMGFADAIDDVISYTPTARQT LLFSATYPQGIERISARVQREPVTIETGDVSALPDIEQQFYETSRGEKLLLLQALLSNLQ PASCVVFCNTKRDCQDVYDALSGQDISVLALHGDLEQRERDQVLVRFSNRSCRVLVATDV AARGLDIKELEMVVNYELSFDPEVHVHRIGRTARAGQKGLAVSFVAPSEMVRAHALEDYI GLKPNWLSADKMMASPMKPLEAEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAADVGKI DMFPIHAYVAIRKAAAKKAYKQLQEGKIKGKSCKVRIYK >gi|316917754|gb|ADCU01000021.1| GENE 96 97467 - 97730 342 87 aa, chain - ## HITS:1 COG:no KEGG:PANA_3687 NR:ns ## KEGG: PANA_3687 # Name: yhcN # Def: YhcN # Organism: P.ananatis # Pathway: not_defined # 1 87 43 131 131 102 69.0 4e-21 MKAIKAITAAILVSSVSFGALAAEEITKEEAAKYTKIGTVSTTAETTSPMDAKEVLSKLA DEKGGKYFVIIAGREHGKISATAEVYK >gi|316917754|gb|ADCU01000021.1| GENE 97 97921 - 99324 1349 467 aa, chain - ## HITS:1 COG:BS_yckE KEGG:ns NR:ns ## COG: BS_yckE COG2723 # Protein_GI_number: 16077410 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Bacillus subtilis # 4 467 9 477 477 475 51.0 1e-134 MSQFPKGFLWGAATAAYQVEGGHDADGKGLSVWDVFSHQPGTTHEGTNGDVAADHYHRFK EDVALMAELGMTSYRFSISWSRVLPQGTGEVNEAGISFYSNLIDELLRHNIRPMITLYHW DLPQALQDKFGGWAGRDIVDAFDEYARLCYQRFGDRVDLWSTFNETIVFIGMGYFTGQHP PKLKDPTLGIQACHHVFLANARAVKSFREMGINGQIGFVNVLQPNDPISQEPEDLRAWEI AEGIYTHWLYDPVLKGEYPQDMLAMAQTAFGVPEFHPGDAELLKDNIVDFIGLNYYKREM VARNDDVQGFDLNTSGQKGSGGGMGFKGLFKIVKNPNGVYTDWDWEIYPQGLTDAIGRIR HRYGEVPIYITENGLGAKDPIVNGAVLDQPRIDYLREHIRAVGNAIEQGADVRGFYPWSF IDLLSWLNGYQKQYGFVYIDRENNLTRKKKLSFEWYQKVIHSNGEEL >gi|316917754|gb|ADCU01000021.1| GENE 98 99368 - 100690 778 440 aa, chain - ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 1 424 4 427 446 402 49.0 1e-112 MNISQSLFSFIENRISPIAGRISSQRHIMAIRDGFISAMPFMIVGSFLLVFVYPPFSAES SWSFARSWLALSGKYESQILTPFNMTMGIMSVYISAAIAYNLARSYQLDPFMTAMLALMG FLLVSAPQVNGNMPTVALGGVGIFTAVIVAVYVTELTRFLKLRNIGIRLPEQVPANIKQS FDLLIPILAVIITLYPLSLLIQEIFNQLLPQAIMALFQPLISAADSLPAILLAVLICHLL WFAGIHGSAIVSGMLQAFWLTNLGLNQTELAAGLPLTHIMTEAFWNFLIVIGGLGATFGL ILLFMRSKSAHLRAMGKLSLVPSMFNINEPVIFGTPIVMNPTFFIPFILAPMVNAVVAYL AVTTNLIPHMISLVPWTSPAPIGAAWAMGWDFRVSVLVLLLMALSAVIYYPFFKVYEKQL LAQECVESTRQQTRVQTAQR >gi|316917754|gb|ADCU01000021.1| GENE 99 100832 - 101392 308 186 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 68 185 59 174 175 123 48 1e-26 MLFRKLTLAVIFCLGTFTVQVASAFDLPSYFKSDKLLETPKIPHHSKAMTHFARVNNTGV GDVNHSMVKNVILQNYRHWEGVKYLWGGDSKYGIDCSAFTRRVLSQLKINLPRTTSEQIH SGNQVSKQQLKIGDLVFFKTSSVTRHVGIYVGNGQFIHASKSMGVTTSRLDENYWQRSYE TSVRVI >gi|316917754|gb|ADCU01000021.1| GENE 100 101679 - 102374 612 231 aa, chain - ## HITS:1 COG:STM3677 KEGG:ns NR:ns ## COG: STM3677 COG0235 # Protein_GI_number: 16766962 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Salmonella typhimurium LT2 # 1 231 1 231 231 382 80.0 1e-106 MLEQLKQQVLAANLALPHHHLVTFTWGNVSAIDRESGLVVIKPSGVEYDGMQAKDMVVVD LRSGNVVEGDKKPSSDTATHLALYRAFPHIGGIVHTHSRHATIWSQAGLDLPAWGTTHAD YFYGPIPCTRLMKREEIAGDYEHETGEVIIETFTQRDIDPMQVPAVLVHSHGPFAWGKDA ADAVHNAVVLEECAYMGIFSRQLTPGISAMQQSLLDKHYLRKHGANAYYGQ >gi|316917754|gb|ADCU01000021.1| GENE 101 102368 - 103240 717 290 aa, chain - ## HITS:1 COG:sgbU KEGG:ns NR:ns ## COG: sgbU COG3623 # Protein_GI_number: 16131453 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli K12 # 6 290 13 297 297 488 82.0 1e-138 MNIAKRVHPLGIYEKALPKTLSWSERLALAKSCGFDFVEMSVDETDERLARLDWSTAQRS ALVSAMLESGIAIPSMCLSAHRRFPFGSHDENVRQQAREIMTKAIQLARDLGIRTIQLAG YDVYYEEQDEGTLQRFTEGLTWAVEQAAGAQVMLAVEIMDTEFMNSITKWKKWDRLLSSP WFSVYPDVGNLSAWGNDVSAELALGIDSIAAIHLKDTYPVTASSQGQFRDVPFGEGCVDF VGIFRTLKQLNYRGSFLIEMWTEKAQEPVLEIIKARQWIEARMLEGDFVC >gi|316917754|gb|ADCU01000021.1| GENE 102 103237 - 103896 612 219 aa, chain - ## HITS:1 COG:STM3675 KEGG:ns NR:ns ## COG: STM3675 COG0269 # Protein_GI_number: 16766960 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Salmonella typhimurium LT2 # 1 218 1 218 220 302 73.0 4e-82 MSRPLLQLALDHTSLNAALQSVNALKNSVDIIEAGTILCISEGLQAVRQLRQLCPEHTIV ADLKVADAGETLATEAFNAGADWMTVICAAPLATVVKAHQIAQSRGGEIQIELFGNWTLD DAKAWRAAGVRQAIYHRGRDAQASGQSWSQQDLDRMQQLSDLGLELSITGGITPQDLSLF SDISVRAFIAGRALSEATNPAQVAQEFHQQINAIWGERA >gi|316917754|gb|ADCU01000021.1| GENE 103 103910 - 105436 1047 508 aa, chain - ## HITS:1 COG:lyxK KEGG:ns NR:ns ## COG: lyxK COG1070 # Protein_GI_number: 16131451 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 6 501 2 492 498 735 70.0 0 MNATSTEYWLGIDCGGTYLKAGLYDRQGAELCISRQALPVISEHPGWAERDMSALWQSCI DTIANVLRQSGVSGQQVQGIGISAQGKGLFLLDKNEKPLGNAMLSSDRRAIEVVSQWQRD GLPELLYPLTRQTLWTGHPVSLLRWVKLHQPERYRQIGSVMMAHDYLRFCLTGERACEET NISESNLYNMTLGGYDPQLTELLGISEVNSAIPPVVGSAEISGRVTEEVAAKTGLCVGTP VVGGLFDVVSTALCAGLQDEFTLNAVMGTWAVTSGLAPEICQHEAHPYVYGRYANALSSD EKNYIVHEASPTSSANLEWLTQQLGGLGFEEINRLVAALPKAGSDVMFLPFLYGSNAGLD MTAGFYGLQSLHHRGHLLQAVYEGVIFSHMTHLNRMRERFTQVKKLRVTGGPAHSKVWMQ MLADVSGLPIELPQVEETGCLGAALAALVGCGVYSDFKQAQGQLSHDIQRIEPDDAAWSA YQHKFTRYQYLIEALQTYHVRCSSLNKS >gi|316917754|gb|ADCU01000021.1| GENE 104 105509 - 106846 1205 445 aa, chain - ## HITS:1 COG:YPO2535 KEGG:ns NR:ns ## COG: YPO2535 COG0477 # Protein_GI_number: 16122753 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 17 443 10 443 443 480 58.0 1e-135 MNSNSDTLNKNNIPEDIPRQRWLRIIPPILIACIISYMDRVNIAFAMPGGMDADLGITAS MAGLAGGIFFIGYLFLQVPGGKIAVHGSGKKFIGWSLVAWVVISVLTGLVTNQYQLLFLR FALGVAEGGMLPVVLTMISNWFPDAERGRANAIVIMFVPIAGIITAPLSGWIITALDWRW LFIIEGLMSIAVLVLWVVAVCDRPQEARWISEKEKTWLIDTLAEEQRAIAGKEVKNASLS AVLSDKTMWQLIALNFFYQTGIYGYTLWLPTILKELTHTSMGQVGMLAILPYIGAMAGMF LFSSLSDRTGKRKLFVFLPLLGFAVCMFLSVTLKQHIWWSYAMLVGCGVFLQSAAGVFWT IPAKLFSAEMAGGARGVINALGNLGGFCGPYAVGLLITYYNKDAGVYCLALSLALAALLA LLLPAKCDVPTQSTAQLPKGKRSAA >gi|316917754|gb|ADCU01000021.1| GENE 105 106966 - 107937 658 323 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3996 NR:ns ## KEGG: ECS88_3996 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 318 1 303 306 394 60.0 1e-108 MKQNNGFIVGAYPCAPSFHQREEALESAFWRGLADIEGIRGIEQPCLEDLHPYGDDYLFQ HIPSDWQIVVTAVMETMRRRGKNSGFGLASSDTEQRLACVDYYRHILDKINRANDRFGMQ KVLALEIQSAPLAGSDNVMLAAECFADSMRQIASWEWPCELVIEHCDAMNTPDARKGFLP LEQEIAVIDCLKSELGKEVGVALNWARSAIEGRNTELPMQHLRASQQSGALKALMFSGTT CGGAYGDWQDLHAPFAPFSGAEVHCAESLMTVALAAEMFNAAPLDSLSFAGIKLLEIDPQ ASVEHRIAILRDGIKALNIASKN >gi|316917754|gb|ADCU01000021.1| GENE 106 107977 - 108444 214 155 aa, chain - ## HITS:1 COG:yiaL KEGG:ns NR:ns ## COG: yiaL COG2731 # Protein_GI_number: 16131447 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli K12 # 1 155 1 155 155 233 72.0 1e-61 MIFGHISNENPCNLPEAIQRALQFLRSTDFSQQEAGEVEIDGRDIYAQIIDMTTRPKAEN RPEVHRRYIDIQFLAWGEEIIGVAADRGNNKISESLLAERDIIFYHGAENESEITMTPGS YAIFFPQDVHRPACIKNKATPIRKVVVKVALTALN >gi|316917754|gb|ADCU01000021.1| GENE 107 108457 - 109455 909 332 aa, chain - ## HITS:1 COG:yiaK KEGG:ns NR:ns ## COG: yiaK COG2055 # Protein_GI_number: 16131446 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 1 332 1 332 332 605 87.0 1e-173 MRVSFEQLKQEFERVLLARGVQAETASECATMFAQTTESGVYSHGVNRFPRFIQQLDAGD IIPEAQAKRILALGAIEQWDAQRSIGNLTAKKMMDRAMSLASDHGIGLIAVRNANHWMRG GSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLIVAIPGNPITMVDMSMSMFSY GMLEVNRLAGRELPVDGGFDDEGNLTREPGVIEKNRRILPMGYWKGSGLSIVLDMIATLL SDGASVAEVTEDNSDEYGISQIFIAIEVDRLIEGATRDAKLQRIMDYVTSAERSNPDVAI RLPGHEFTHLLAENRRNGITIDDSVWAKIQAL >gi|316917754|gb|ADCU01000021.1| GENE 108 109753 - 110574 618 273 aa, chain + ## HITS:1 COG:STM3667 KEGG:ns NR:ns ## COG: STM3667 COG1414 # Protein_GI_number: 16766952 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 14 273 7 266 266 449 85.0 1e-126 MKTKEKETDIEPSKEKPAGSQSLFRGLQLIEILSNYPNGCPLAHLSELAQLNKSTVHRLL QGLQSCGYVTPAPAAGSYRLTTKFIAVGQKALSSLNIIHVAAPHLEALNINTGETINFSS REDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMGKIYMAYGHHDYVESYWKSHQDEI QPLTRNTITQQDKMYQELEQIRQQGMAMDREENELGVSCIAVPIFDIHHRVSYSVSISLS TAKLGLIGEQNLLKPLKETAAAISRELGLSTYE >gi|316917754|gb|ADCU01000021.1| GENE 109 110600 - 111217 375 205 aa, chain - ## HITS:1 COG:no KEGG:PAU_00477 NR:ns ## KEGG: PAU_00477 # Name: not_defined # Def: hypothetical protein # Organism: P.asymbiotica # Pathway: not_defined # 15 198 1 184 192 149 40.0 5e-35 MNSAVPFLSRVWHWLTMPREPVGYQPGQMLKLVARDFRPYPCERLSLRCLSISLPQGMTV EVHEKATALFRSFVVCSHFYIQGVTGLQHPVRMKVRNGNVFGQGGIRFRCKARNDDSQRL LAVLNCYPQIFTALEQLHFRQLNLWSEQGRWRLEIEHFAASEVISQVPVERRYQKLHHDQ RQQLLNVMQMFEQLMTRVAIEGVAA >gi|316917754|gb|ADCU01000021.1| GENE 110 111375 - 112334 522 319 aa, chain - ## HITS:1 COG:NMA1036 KEGG:ns NR:ns ## COG: NMA1036 COG3440 # Protein_GI_number: 15793992 # Func_class: V Defense mechanisms # Function: Predicted restriction endonuclease # Organism: Neisseria meningitidis Z2491 # 177 316 220 364 372 85 33.0 1e-16 MMRYWWVNHKQTVKHEVDGGFLWSPKTKKGNAKNRFYDNLCIASPGDKVVSYANKMIAYV GVVTDFAISASKPEFGAAGKLWDNDGWLLPVDWQKFNAPVSPLQILDQLRPCLEVDGIFS PIRLDNAHGYQHIYLTEIGKPAFEVVCAAGDGTTYLETKKTRVEPIPLREKLDDEIEKQV IADKALSDTIKEQLVKARRGQGDFRRNLQGVEPYCRITKINTPSLLIASHIKPWRCCESG NERLDGNNGLLLAPHVDWLFDKGLITFTDTGDVLVSPNISENELSKLGLDNMSKRNVGAF NDEQRVYLEFHRNNIFLNK >gi|316917754|gb|ADCU01000021.1| GENE 111 112548 - 113165 444 205 aa, chain - ## HITS:1 COG:no KEGG:PAU_00477 NR:ns ## KEGG: PAU_00477 # Name: not_defined # Def: hypothetical protein # Organism: P.asymbiotica # Pathway: not_defined # 19 203 5 189 192 124 36.0 1e-27 MNSEVQVVNNLWRWLSGQRDPIGYQPGRVLHLVEKNLQPFECKRVSDRVLHVACPQGLEV EVEERVVTSFRSYSVTCHFHLRGDTGLQQQIHIQAKNTDILGRGDTRFSAKTHNDDSRRL MAVLDCYPEITDALDCLNFRRLNLRSEAGKWQLEIELFAATELVGPRPVCSGYQRLPYAQ RHLMLDVMQMFQKMMDRVTVQGVAA >gi|316917754|gb|ADCU01000021.1| GENE 112 113884 - 114795 632 303 aa, chain + ## HITS:1 COG:yjiE KEGG:ns NR:ns ## COG: yjiE COG0583 # Protein_GI_number: 16132148 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 289 11 297 303 188 36.0 9e-48 MDTGWLEDFLALAELRNFSRAAQRRNITQPAFGRHIRALEESVGQKLVDRSSTPVTLTPA GYQFRLIAHSMVNQLQEGIQKMNGLPSEMINPVRFCAPHSLSSPFLLDLIEQIDHTTPFS VDILRVDFAVESLIEGASDFLLAFDTHALLQPPFTNLLLGKGELLLVSAADNHGQPLFTP DENNHQPMPYLRYSPDSYSARMVERLMPQQPFACQPVFESSLCDLHRQMALRGKGLAWLP DCQIEDELKQGKLIAVDRKRWHIPYQIRLYRNQAQLHQRAEAFWQSLSQQIALGKTFWAP LHC >gi|316917754|gb|ADCU01000021.1| GENE 113 114925 - 116043 1035 372 aa, chain + ## HITS:1 COG:SPBC1683.02 KEGG:ns NR:ns ## COG: SPBC1683.02 COG1816 # Protein_GI_number: 19111850 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Schizosaccharomyces pombe # 10 346 4 339 339 125 27.0 2e-28 MTPSTQTITLTEFFTTFPKVDLHYHLLGGVRLATMLDLAQKYGVPLTEAEAKSYYRRYQH ETSVVKGGIAALNFLYPLLRSAEDYYRVTYEVAEDAAATGIRHLELFWNPSDTALTYAEV TEAMSAAMQKAAEQWDIRALFIPSINREKSPEEAVAMVEAVLQYPHPLVPGIGIDYKEND APIEHFWKAYRKAKQGGLRLTGHCSEFGLHWRNVETGLDLIHLERIDHGYTVLDNPELTA RCVRENVPFTVVPSNTYYLKKWPDASQWRQNHPIRHMALAGMNIIPATDDWHMHNTNGAE CYRVMVEEFGFDLDGVRQLMLNGIDACWQPEEIKQQWRQSWAEEFDTLRSKLNQEPHINA AQHISYHRPHTA >gi|316917754|gb|ADCU01000021.1| GENE 114 116059 - 117315 1096 418 aa, chain + ## HITS:1 COG:PM1299 KEGG:ns NR:ns ## COG: PM1299 COG3069 # Protein_GI_number: 15603164 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 11 418 13 431 432 286 45.0 6e-77 MLTITAGVIILLLTIVLLIKKQDTRTVLLFSGMLMCLISLEPMAAMNSFAEKMVSEGLIQ AILSAIGFATVMKFTGCDRHLVRLLSAPLKHVGLFLIPGTILLTTFVQLALPSAAGAAAA AGITMIPLQLAAGIHPVMAAASVLAGTFGASLLNPGSPHMALVAKIVGGDVMNIIGDRVM TVVWLGLIIMVGMTITAILRKEHKGYHSRLDAEDPQEGPINVLAALMPLVPIALLMLGAF GGVSWLKMGVPQAVMWGVLATLAVTRTHPGKVVPAFFDGMGKAYSDVFGIIICAGVFVAG LTSVGLIDAAKSALIDFPEAARFGGTIGPFLMAVVIGSGDATAYAFNEAITPHAAEFGMN PTNLGTAAAFASYLGRTASPLSAAAIVVAGMAGVSPIELIKRTAPVMLIGLVLLIILI >gi|316917754|gb|ADCU01000021.1| GENE 115 117842 - 118546 720 234 aa, chain + ## HITS:1 COG:RSc1461 KEGG:ns NR:ns ## COG: RSc1461 COG1285 # Protein_GI_number: 17546180 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Ralstonia solanacearum # 8 227 16 235 240 196 52.0 3e-50 MNFTLHYETFTILLVAFLLGAIIGYERQYRQRTAGLRTNTLVATSAAIFVHLAMSIDGAG GAVRVISYVVSGVGFLGAGTIMKEGLNIRGLNTAATLWGSAAVGACAGAGMIADACMATF FVVASNTLLRPMVNMINRQPLTDEHGDATYEICVIALENDQREALSLVKKTLKAENCFMS HLDVEPFGDDDVEITVSLIPASVSADDLDNLVNVLLDERLIKQAYYSRIGGSSS >gi|316917754|gb|ADCU01000021.1| GENE 116 118647 - 119534 733 295 aa, chain + ## HITS:1 COG:PA1205 KEGG:ns NR:ns ## COG: PA1205 COG1741 # Protein_GI_number: 15596402 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Pseudomonas aeruginosa # 10 295 24 309 315 317 54.0 2e-86 MDSSFNSTSLQRITSRIKDVGGIPVSRAIPVKERRLIGAWCFLDHAGPSVLKNSTGGFRV APHPHTCLQTFTWMLEGEVLHRDSLGYEQIIRPGQVNLMTAGHGIAHTEESVPGFTRLHA AQLWIALPEAVKDMPPRFDHYPTLPVWDADGIRHTLLAGNYASFHAPTLCFSELLGVDLY TPDGSNTQLKLQPDFEYGLFVLEGEINIEGERFGENELAYIGTQHTRLNVTLAPKTRLLF LGGEPLGEQVLMWWNFVGRSKEELRQSIAEWNQDTGRFGTVQGFDGERTLSPEMP >gi|316917754|gb|ADCU01000021.1| GENE 117 119578 - 121137 1296 519 aa, chain - ## HITS:1 COG:STM3152 KEGG:ns NR:ns ## COG: STM3152 COG0840 # Protein_GI_number: 16766452 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Salmonella typhimurium LT2 # 1 519 3 515 547 288 40.0 2e-77 MLKNISLRTGLLVLLLLITLLLLVVSALGLITIHRDRAALVELNQIQGTELNSLNGSNTQ TLIARANASLAVRKIEIGLLDEGAALSRKIVQNIKDSQQQMQRFAEISRQTERNTDLDQR VLSTYQSYIKQGIEPMLAALNKQYTDEYYEVLENKLTPLSIGFSHAINEFNTYAQGAVEQ RLQDSETSESRMRLLILVVALLTLVMVVTSWLVLRLMLLKPLDATIGHLEVVAAGDLTQP LLPASSKELNRLTQAIETMQQSLRKSVSEVRETSEQIDIGSRELAAGNLNLSQRTEESAA SLEQTAASMEQLTATVKLNADNAEQAHQLARKVSDTADRGSEAVCYVMEKMDEIAESSGR IADILEVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSGQAAKEIRSL ISTSQTRVSEGAKMAYQAGETMDEISGEVMRVTGLMKEISGASKEQSRGIEQVNLAVTQM DEVAQQNAALVEEAAAATRSLETQSQQLMMSMAAFRVSA >gi|316917754|gb|ADCU01000021.1| GENE 118 121439 - 122938 1295 499 aa, chain + ## HITS:1 COG:feaB KEGG:ns NR:ns ## COG: feaB COG1012 # Protein_GI_number: 16129346 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 499 2 500 500 769 75.0 0 MPDNKVAILDSVSRFLDRQHGLYINGKWQESTADERLAIYNPADGAQISSSADANAEDVS RAVTSAHQAFHSGVWAQRLPAERERILLRYADLVEQHAEELAQLETLEQGKSINISRAFE VGCTLNWMRYTAGLTTKITGQTMDVSIPMPAGAKYMAYTRKEPIGVVAGIVPWNFPLMIG IWKVMPALAAGCSIVIKPSETTPLTLLRMAELASEAGIPDGVFNIVTGKGSVCGKALTEH PLVAKVSFTGSTPVGKGIARAAADRLTRVTLELGGKNPAIVLKDADQQQVIEGLMAGSFL NQGQVCAASSRIYIEEPIFDSLVAGFEQAVKSLSVGPGMDASTQINPLVSRQHRDKVASY LQDAKAKNAELISGAAGPDTQGFYIPPTLVINPDAALNLAREEVFGPVVNLIRVKNAEEA LHQANDTDYGLTASLWTTSLQTAMAYTPRIQAGTVWVNSHTLIDANMPFGGVKQSGTGRD FGTDWLDAYTETKTVCVRY >gi|316917754|gb|ADCU01000021.1| GENE 119 123015 - 125330 2317 771 aa, chain - ## HITS:1 COG:tynA KEGG:ns NR:ns ## COG: tynA COG3733 # Protein_GI_number: 16129347 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Cu2+-containing amine oxidase # Organism: Escherichia coli K12 # 28 764 14 750 757 1213 77.0 0 MFRKTVFSKTALHKKTMTKKRLPVAIALALGVLTSAGWQTTAQAHGAAAHMVPMEKTLEE FGADVQWDDYARMFILSKDGAYIKVKPDTNEAIVNGKPLKLAVPIVFRNKVAYMSEDFIN EVFQSGLDQTFAIEKRAHPLNPLSADEIKTAVDVIKASDNYRDNFRFTEISLREPPKDEV WQFVLAGKTVEQPRQANVTVLDGKHVVESVIDLKDKKVVSWTPIKDAQGMVLLDDFSTVQ SVINASTDFAAVLKKRGINDPSKVITTPLTVGYFDGKDGLTQDQRLLKVVSYLDVGDGNY WAHPIENLVAVVDLEQKKIIKIEEGPVIPVPMAPRPFDGRDRKAPEIKPLEIVEPEGKNY TITGNTIHWQNWDFHVGLNSRVGPIISTVTYNDQGKKRKIMYEGSLGGMIVPYGDPDIGW YFKAYLDSGDYGMGTLTSPIARGKDAPSNAVLIDQTIADYTGKPMTIPRAMAIFERYAGP EYKHQEMGQPNVSAERRELVVRWISTVGNYDYIFDWVFHQNGTIGIDAGATGIEAVKGVK ARTMQDPTAKDDTKYGTLIDHNIVGTTHQHIYNFRLDMDIDGENNSLVELNPDVKPNDRS SPRTSTMQVDQVDVKSEKDAAQKFDPSTIRLLSNTNITNKMGNPVSYQLIPYAGGTHPIA KGANFGKDEWIYHRLSFMDKQLWVTRYNADERYPEGKYPNRSIHDTGLGQYSSDNQSIEN TDNVVWLTTGTTHVARAEEWPIMPTEWVHALLKPWNFFSETPTLDLSGKKE >gi|316917754|gb|ADCU01000021.1| GENE 120 125707 - 126618 774 303 aa, chain - ## HITS:1 COG:feaR KEGG:ns NR:ns ## COG: feaR COG2207 # Protein_GI_number: 16129345 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 9 303 6 301 301 309 53.0 3e-84 MTTSSQLKDADFEVWLAQINQACGRFAAKTLGEGFSGSVQEFRSGALRLSVVDIAQTKLY RTPQEIAQSDGSYFYTVFQLSGHSEMEQEGQRALLSAGDITLIDAAKPSTFTFSETSSQI SLLLPRGYLERNLQFADLRCAQRLAAGAPMVRLSQQLVQESMRNSALDQQESEAVLDAVA TLLRPALIARDDDAPQDKVFHRTLSFIDKHIQSESLRPEWIASEVGVSVRSLYRMFARKG LVVAQYIKNRRLDLCANALRSAPVRQKLSDIGYSWGFADHSHFSTAFKMRFGVTPGEYRK QYR >gi|316917754|gb|ADCU01000021.1| GENE 121 126758 - 127858 946 366 aa, chain - ## HITS:1 COG:no KEGG:Spro_0988 NR:ns ## KEGG: Spro_0988 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 9 365 7 364 367 576 81.0 1e-163 MANFRALGLRPLGLLTLLVLAGCSTKTTQTPTPRPAQVKAQLVDLIPSNVRDRQGWATDI AAAFTAQDIPPTPENLCAVIAVTEQESTFQADPQVPGLGKIAWKEIDRRADQMHIPNFLV HTALLIKSPNGKSYSERLDKARSEKELSAIFDDFINMVPMGQKLFGNLNPVRTGGPMQVS IAFAEAHAKGYPYKVDGTIRREVFSRRGGVYFGTMHLLGYPANYPQPIYRFADFNAGWYA SRNAAFQRAVSRLTGIKLALDGDLINYGTDKPGSTELAVRSLGKRLDMSDSTIRRALEKG DSIDFEKTSLYKQVYALAEKSGGKKLPREILPGITLESPKITRQLTTAWFAKRVDGRWQK CMAKAR >gi|316917754|gb|ADCU01000021.1| GENE 122 127872 - 128060 64 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDYCRNDSVSTYRSQIFYGINELLLVSIFITTEFTTTEIKRLHQQNLDPPFYLRYRSLSQ SL >gi|316917754|gb|ADCU01000021.1| GENE 123 128094 - 128303 92 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTLKPDSQNKEGGMTRKAGMQSLLGSRYVTCPGCRQRIRGQLYSMLNQCQTWCPRCKKNV DSCVTSCEK >gi|316917754|gb|ADCU01000021.1| GENE 124 128308 - 129093 863 261 aa, chain - ## HITS:1 COG:STM0070 KEGG:ns NR:ns ## COG: STM0070 COG1024 # Protein_GI_number: 16763460 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Salmonella typhimurium LT2 # 1 261 1 261 261 427 84.0 1e-119 MSESLHIKRNGYILEITLDRPKANAIDAKTSFAMGEAFIAFRDDPELRVAIITGAGERFF SAGWDLNAAAEGEAPDADFGPGGFAGLTELFNLDKPVIAAVNGYAFGGGFELALAADMIV CAQHASFSVPEAKLGIVPDSGGMLRLPKLLPPAIAMEMMMTGRSMDADEALRWGVVNAVV ESEQLMEKARELAEQIAANAPLAVAAIKEIYRETSELSVEEGYRHARSGKLKHYPSVLHS EDALEGPQAFAEKRDPVWKGR >gi|316917754|gb|ADCU01000021.1| GENE 125 129108 - 130694 783 528 aa, chain - ## HITS:1 COG:STM0071 KEGG:ns NR:ns ## COG: STM0071 COG0318 # Protein_GI_number: 16763461 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Salmonella typhimurium LT2 # 1 523 1 516 517 764 67.0 0 MDMIGKRNLRQAWDDLAELYGNKTALIVERLATEHQQREASQYSYTELNNEINRTANLFY SLGITKGNKVALHLNNCAEFIFCWFGLAKIGAIVVPINANLLRDESAYIINQCEATLVVT SAEFYSIYADLKQQGSSSLRQIMLIDNNAEALLASDVLYFQQMKKCQPNTLLSSVEINSE DTAEILFTSGTTSSPKGVVITHHNLLFAGYYTAWQCALRSDDIYLTPMPAFHIDCQCTAA MPTFTVGATFVLLEKYSARAFWGQVCQYRATVTECIPLMMKTLMMQPIMPWERQHNLREV LFYLNLSEQEKEAFIQRFGVRLLSSYGMTETIVGVIGDRPGDKRRWPSIGRVGMGYEAQI RDAQGLEMPTGKVGEMWVKGIPGKTLFKEYYKLPQESTKALTAEGWLRTGDYGYVDEEGF FYFVERSCNMIKRSGENISCVELENIISTHPKIMDVAVIGLKDSIRDEAIKAVVVLNDGE FMTEKEFFTFCGNNMAKFKVPSFFEIRESLPRSCSGKVIKKSLVEVSS >gi|316917754|gb|ADCU01000021.1| GENE 126 130723 - 131928 1223 401 aa, chain - ## HITS:1 COG:STM0072 KEGG:ns NR:ns ## COG: STM0072 COG1804 # Protein_GI_number: 16763462 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Salmonella typhimurium LT2 # 1 401 4 404 405 709 84.0 0 MSMPTFGPLSGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAYGDTIRVQPNYPQLSR RNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDDILWEHNPKLIIAHL SGFGQYGTPEYTNLAAYNTIAQAFSGYLIQNGDKDQPMPAFPYTADYFSGLTVTTSALAA LYKMQKTGIGESIDVAMYEVMLRMGQYFMMDYFNGGEVCPRMTKGKDPYYAGCGLYKCQD GYIVMELVGVNQIQEMFKDMGIANLLGTPEIPEGTQLIHRVECPFGELVEDKLDEYLAGK PYEEALARFAELNIASAKVLTIPELESNPQYIARESITTWDTIDGRTYKGPNVMPKFKNN PGQIWRGMPTHGMDTATILASIGYSEADIEALVAKGLAKAD >gi|316917754|gb|ADCU01000021.1| GENE 127 132055 - 133197 1224 380 aa, chain - ## HITS:1 COG:ECs0042 KEGG:ns NR:ns ## COG: ECs0042 COG1960 # Protein_GI_number: 15829296 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli O157:H7 # 1 380 1 380 380 734 91.0 0 MNFALSDEQELFVSGIRDLMAQENWEAYFAECDRNSQYPERFVKELADMGIDSLLLPEEH GGLDAGFVTLAAVWAELGRLGAPTYVLYQLPGGFNTVLREGTQEQIDKIMAFRGTGKQMW NSAITEPGAGSDVGSMQTSYTRKNGKVYLNGSKCFITSSAYTPYIVVMARDAASPDKPVF SEWFVDMSKPGVKVNKLEKLGLRMDSCCEILFDNVELEEKDMFGREGNGFNRVKEEFDHE RFIVALTNYGTAFCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLFEA AWKSDNGLMTSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGDHRITRFWRDLRVDRVS GGSDEMQILTLGRAVLKQYR >gi|316917754|gb|ADCU01000021.1| GENE 128 133249 - 134772 1228 507 aa, chain - ## HITS:1 COG:STM0074 KEGG:ns NR:ns ## COG: STM0074 COG1292 # Protein_GI_number: 16763464 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Salmonella typhimurium LT2 # 4 506 2 503 505 751 75.0 0 MSTEKSKRKIGIEPKVFFPSLIIVALLCYLTMRDLNASNIVINSVFNYITTEWGWAFEWY MVVMFIGWFWLIFGPFAQRRLGEEAPEFSTVSWIFMMFASCTSAAVLFWGSIEIYYYVSS PPFGLTPFSNPAKDLGLAYSLFHWGPLPWATYSFLAVAFGYFLFVKKIDVVRPSGTLVPL FGEKRCNGIIGTVIDNLYLVALILAMGTSLGLATPLVTECIQYLFGVPHTLQLDALIISC WVIFNAVCVAFGLQRGVKVASDVRNYLSLILLAWVFIIGASSFTINYFTDSVGVLLNNFT RMLFYTDAVGKSGFPQAWTVFYWAWWIVYGIQMCIFLARISKGRTVRQLCLGMVGGLTAS TWLLWTILGSNTLSLINNGKINIPQIIEQHGVARAIIDSWALLPFSTLTMWAFFILCFLA TVTLINACSYTLAMSTCRGANGYDEPPIWVRVGWSVLVGIIGIILLALGGLKPIQTAIIA GGCPLFFVNILITISFLKDAKATHWKY >gi|316917754|gb|ADCU01000021.1| GENE 129 135482 - 136255 707 257 aa, chain + ## HITS:1 COG:STM0075 KEGG:ns NR:ns ## COG: STM0075 COG2086 # Protein_GI_number: 16763465 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Salmonella typhimurium LT2 # 1 256 1 256 256 313 67.0 2e-85 MKIIACYKLIPEEQDITVNGDGSLNLSKADAKISQFDLNAIEAATALKQQNSDIQIIAMS VGGEALANAKGRKDVLSRGPDELVVVSDAGLEKMLPHQTATMLAAAAKKTGFDVILCGDG SADLYAQQVGLLLGEALGVAAINGVSRILSLSETNIQIERTLEDEVETLTIPLPAVLSVS TDINTPQIPSMKAILGAAKKPVTAWQPADLELGEIAPYTTLLSVQAPQQKARGRIIIEGD SDEQISEFAEHLRKVIS >gi|316917754|gb|ADCU01000021.1| GENE 130 136267 - 137214 848 315 aa, chain + ## HITS:1 COG:fixB KEGG:ns NR:ns ## COG: fixB COG2025 # Protein_GI_number: 16128036 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Escherichia coli K12 # 1 315 1 313 313 372 61.0 1e-103 MSKFSTVWVFSDTKSHLPELMSGARELGELIHVVSQSDEQSALAFRLGANAVYSLGEQPD DRIIEDYADTLVQAIRSQSHSSRALLLLPATRRCKTLAARLGARLAAGVVNDAAELSLED GCPVATHMVYGGLAFGKEKITTDYAVVTLASGVFAPAQEDSARSGNAQTLEFIAPAHAII CESRRVKQGESVDLGKARLVVSVGRGIGSQENIAIAAALSNAIGAELGCSRPVAENEKWM DRERYVGISGIMIKPDLYLALGISGQIQHMVGANGAQILMAINKDKNAPIFQYADYGIVG DLMKIVPALTEKLKR >gi|316917754|gb|ADCU01000021.1| GENE 131 137276 - 138568 1099 430 aa, chain + ## HITS:1 COG:STM0077 KEGG:ns NR:ns ## COG: STM0077 COG0644 # Protein_GI_number: 16763467 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Salmonella typhimurium LT2 # 1 430 1 428 428 606 71.0 1e-173 MSEDVFDAIIVGAGLSGCVAALVLAREGANVLVIERGNHAGAKNVTGGRLYAHSLERIIP DFATQAPVERRITHEKISFLTDDSAVTLDYHHARAAEPAQESYSVLRGKFDPWLMEQAEA AGAQFVPGIRVDKLIQRDGKVIGVEADGDILEANAVILAEGVNALLAEQLGMVQKQVSAK HVAVGVKELIELPRELIEARFSLTDNEGAAWLFAGTPSDGQMGGGFLYTNGDSLSLGIVV GLHHIASAGKSVPQMLEDFKQHPVVRPLIAGGKTLEYAAHVVPEAGINMQPKLVGNGVLI AGDAAGMCMNLGFTIRGMDMAIASGEAAARAVLEAKTNNDFSERGLSVYLKLLEELPVMK DLRHYRKVPAMLENPRMFTQYPQMVANIMADMFTVNGQPPQPMRKMIMRHCKEIGYLNLL KDGIKGVTAL >gi|316917754|gb|ADCU01000021.1| GENE 132 138565 - 138852 268 95 aa, chain + ## HITS:1 COG:STM0078 KEGG:ns NR:ns ## COG: STM0078 COG2440 # Protein_GI_number: 16763468 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Salmonella typhimurium LT2 # 1 95 1 95 95 151 69.0 4e-37 MTEPVNVDVKLGINKFHVDEGHPHIIIREHPDMAAFHTLTLACPAGLYKLQPDGTIRFDY AGCLECGTCRILCKDSVLDEWNYPRGSFGVEYRYG >gi|316917754|gb|ADCU01000021.1| GENE 133 139019 - 140278 1236 419 aa, chain + ## HITS:1 COG:yaaU KEGG:ns NR:ns ## COG: yaaU COG0477 # Protein_GI_number: 16128039 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 418 20 437 443 602 73.0 1e-172 MLWGSGGPFLDGYVLVIIGIALEQLTPVLKLDAQWVGLVGIATLVGLFIGTSLFGYVADV LGRRLMFIIDIIAIGVISAATMFVTSPLELVILRFLIGIVIGADYPIATSMIAEFSTTRQ RAFTMGFIAAMWYIGATAADLVGYLLYDVANGWRWMLGSAVIPCIIILLGRFELPESPRW LIRKGRVEECRALMFKLFGENVVFDNEETQETRYSQIFTRRHLTSILFVAIIWTCQVIPM FGIYTFGPQIISLLGLNEGKEAVLGNVVISLFFLIGCIPAMYWLNSIGRRPLLIGSFAIM TLALAVLGVVPDPSITLIVSAFALYAFFSGGPGILQWLYPNELFPTHIRASAVGAAMSLS RIGTVISTFALPLFMQQHGIAMTMLAGAGVSLFGMVISIFLAPETRGLSLDKTSQMELY >gi|316917754|gb|ADCU01000021.1| GENE 134 140344 - 141318 611 324 aa, chain - ## HITS:1 COG:aes KEGG:ns NR:ns ## COG: aes COG0657 # Protein_GI_number: 16128460 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Escherichia coli K12 # 1 320 1 319 319 427 61.0 1e-119 MKPVNKVNVLEKISSEMREVLCIQKEHAIPISPDSDNSTIRLAYIEERKYWNLHGPQMMK IIHEKVMTTHGEIETRIYYPYSETSAVIFYLHGGGFIVGNLDTHDRIMRLLAHYSGCNVI GIDYTLSPESKFPQAIEETVDICRHFHQHAADYHLNMRSIGFAGDSAGAMLAIASGLWLR DRGIDCGKVQGILLYYGLYGLQDSASRRLYGGEWDGLTGPDIAMYQNAYLASDDDKESPY YCIFNNDLSQKMPACFIASAEFDPLIDDSIALYRTLSEHQQPCRYQMYPGTLHAFLHYSR MMESADQALRDGAIYFREQLQLAL >gi|316917754|gb|ADCU01000021.1| GENE 135 141781 - 142185 273 134 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_2969 NR:ns ## KEGG: NT01EI_2969 # Name: not_defined # Def: DNA-binding transcriptional activator CaiF # Organism: E.ictaluri # Pathway: not_defined # 1 134 5 145 145 185 67.0 4e-46 MCREYVQEPLYLLVARWAMQQQRWISSREIADKFNLTPCKAINLVSYILSAVDEIDCQTK TIPNHLEGRGCQCQRMIQVDHIDDQITERIKNAINTDGDDNDSTSMPRMTIPVPPSELNQ EQKWKWMLSKGQRK >gi|316917754|gb|ADCU01000021.1| GENE 136 142454 - 143482 534 342 aa, chain + ## HITS:1 COG:ECs1699 KEGG:ns NR:ns ## COG: ECs1699 COG0614 # Protein_GI_number: 15830953 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 340 1 338 340 315 52.0 1e-85 MQITRRTLIGYLFSGIALSLTPFSAQAANTLLAPFGTLPAPKKTHRVLSAGAPADLLLLA LAPKMLLGLSSFDLSVSGGDLLSAEIKKLPRLGRLSGRASTLSLEKILALNPDIIIDCGS ADETFRSLAKRTAAQTGIPYVLVDGKLQDSADQLRQVGALLGVSERAEKQALLAERFLHD ASNFAQQSRQQTRFYSARGTTGLETGLKGSLHTEAVEQLGLINVASDASQHGLSQVSFEQ LLLWEPDIILTQDANTYDYIIHNALWKNLKAVRNGQVLLLTGLPFGWLDSPPGINRLLGM RRLQAHFDAKIQADWANDLHQFFQLFYHTDLSAAQLQPLLEV >gi|316917754|gb|ADCU01000021.1| GENE 137 143482 - 144471 805 329 aa, chain + ## HITS:1 COG:ECs1698 KEGG:ns NR:ns ## COG: ECs1698 COG0609 # Protein_GI_number: 15830952 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 # 17 318 15 314 326 314 63.0 2e-85 MGQAKNIALFSCGILFAILLALMVGKYPLTPAELLGLMTHSNTAQADPRAAIVFWQIRLP RILAALMIGAGLSSAGTAYQGMFRNPLVSPDILGVSAGAGMGACVAMWLGLPIVMVQLLA FAGGMLAVTLTCLIAHMAKRHDPVLSLVLVGIAIGTMCGAVISLIKILADPYTQLPSITF WLLGGLSTITQYDLYSTAPVLLLGMLPLLLLRWRMNLLSLPDDESRTMGVNVKRLRLTFI ICATLITASAVSIAGIIGWIGLVVPHICRLVTGDNYQRLFPISMLGGGLLLLLTDTLARS VFASELPLGILTSLIGAPFFLLLLLRGGR >gi|316917754|gb|ADCU01000021.1| GENE 138 144471 - 145220 230 249 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] # 3 212 1 205 205 93 32 1e-17 MAMVVFNNVALGYHHQPVLHNVSFTLQRGEMCCLLGANGCGKTTLMRTLLGLLPVLHGEI ALAGKPLPQWSAAKLAQKVAYVPQAHNGPFSYSVIDMVTMGRSAHLGLFASPNLRDRQLA LDTLETLGIAHLEQRRFPTLSGGERQLVLIARALVQQPELLVMDEPAASLDFGHQITLLK RIRQLKTAGITLLMSTHHPMHAKAVADTIVTLSPQVGALQGTPQQMLNSASLSRLYQVST EEIETHLGI >gi|316917754|gb|ADCU01000021.1| GENE 139 145242 - 146063 860 273 aa, chain + ## HITS:1 COG:ECs1696 KEGG:ns NR:ns ## COG: ECs1696 COG0500 # Protein_GI_number: 15830950 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 214 1 214 214 292 66.0 4e-79 MLIDEIDFAALYQQQLTLAQRTEKAPEHWDKRAEKMAVTCANPQDPYLVQLIAKMDFSNA KTLLDVGCGPGSVCLNVADKLEHVYGIDYSKGMLDVAEKRARAMQLENVTLTRRAWEESW DDLPQCDIAVASRSTLVGDLRRAMQKIHQSARLRVYTTHTVSPSFVNAEVQRVIGRPVIE LPNYIYAVNVLYQLGIHARVDFIRGPNCQGNTDTFERFYESTSWSLGTLNDEEQQRLFDY YTHQKKHDLTIASSTRDWALISWEKNASSLEAL >gi|316917754|gb|ADCU01000021.1| GENE 140 146060 - 146920 186 286 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 13 269 19 270 286 76 25 1e-12 MIFIPDSQLDQWLMDDIHGGDLTTRALGIGARSGVMRFHHRQGGCISGIDTARRMLLRLG LNVEQHLYDGDIASADEILLTAKGRAQALHQGWKAVQNLLEWSCGVSDYLYRMCQILQRY SPNGKIACTRKTIPGTQLLAQQAVIAAGGIIHRAGCSETILLFANHRRFCDSPNNWQSMI TTLRQQAPEKSIIVEADTPEDAKAVLLGQSNGLPDILQLDKFSPQEIVEIKAFGQKQAPN CRLSLAGGINLNTISEFAQTGVPLLVTSAPYYAPPADIKVRLTPTN >gi|316917754|gb|ADCU01000021.1| GENE 141 147018 - 148991 1897 657 aa, chain + ## HITS:1 COG:ECs1693 KEGG:ns NR:ns ## COG: ECs1693 COG1629 # Protein_GI_number: 15830947 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 # 1 657 3 656 656 903 70.0 0 MRKTTLCTAVTLCMTGGFTTGDVQAADDDVMTVWSSPVGNTSEILDQETITKLDKRNVAD ALSVIPGVSLQKSGGRNELQVRVRGFDNRQVPVFYDGVPIYVPYDGNLDLGRFLTANLAS LEVSKGYTSLLQGPNQMGGSINLTTEKPKKELEGNISYRQGWARGKDNAFDTNASLGMKG DLGYLQISGSQFKQRFSGLPDSVDNPVAGKDGKRTNSESDDKRGIVKLGFTPRENDEYTF TYIKQDGEKQNPPYAGDSGQKPKYWQWPEYDKESYYYQGTTKLGDIFTLKSRAYRDTFKN TLLMYNSLSDLKNKKGSYSHYDDYTDGAGLQLSADLRERDQLSFAAHWKEDVHREQGERN APYDRYKDRTWSLSSEYQWAVDDQWDVVAGISYDWRDSLEGMKHEKDGSITHYDNNNQNA FNWQAMTKYNFENRDAIALSVSDRSRFPTLKERYTTSRPAFGQTALVNPNLKAERARSVD LTYTGYINENWGYEASVYYNRISDAILTQNIDADTVQNRNSGRVDYTGLDLGVNGLIADQ VKIGLSYSLIHSDVKDKEVGKVTGLPTQTVMGWVTYTPWQPLSLTLSEEARSSSYSNSDG SQKAAGFAVTNVRADYEIVKGLSVNASVNNVFDTAYAYTEGFVEEGRNYWAGIEYKF >gi|316917754|gb|ADCU01000021.1| GENE 142 149141 - 149788 376 215 aa, chain + ## HITS:1 COG:BMEI0281 KEGG:ns NR:ns ## COG: BMEI0281 COG2258 # Protein_GI_number: 17986564 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Brucella melitensis # 26 211 27 212 242 125 36.0 5e-29 MNNQQPLATLKFILCNQLLADGTRQKRLVEGRVYINSHGIETQDGLREHFDDPECAIMNY ALEHYDFWRTRYPTQADAFALPGIFGENFATTGLTEQTICIGDIYQMGNAVVQVSWGRVA CNTMATRLDDAQAPDLMHQQSRNGWFYRVLQTGEVQAGTTITLIERPHADWTLSRVQNII FNPNALATDLEAVSKIEQLAAIWKNEAVERLNKMP >gi|316917754|gb|ADCU01000021.1| GENE 143 149850 - 150743 548 297 aa, chain - ## HITS:1 COG:PA1223 KEGG:ns NR:ns ## COG: PA1223 COG0583 # Protein_GI_number: 15596420 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 21 297 21 297 297 342 64.0 6e-94 MSNLRRLDLNLLVTLDALLTEHNVTRVAEKLNFSQPSISVHLSKLRDIFDDPLLLPGPRG MLPTAKAESLREPLRVALSALESVVAPTKPFEPITAKNTWTVSAADYGESTVVLPVLTGL RSVAPNTRLSVIELAPAKIAKQLEMGEIDIAFHVSDEASPELHRKTLFSERYVLAGRQGH PQLSPAITPAQFCALDHVIVSPSGGGFCGVTDDALEQAGLMRRVVLSVPHFLFVKSVLAS TDLVAMLPLRLAVASPELQYIEPPLAIAGYEMSMLWHERSHRDPAHRWLRDFIARSV >gi|316917754|gb|ADCU01000021.1| GENE 144 150830 - 151615 698 261 aa, chain + ## HITS:1 COG:PA1224 KEGG:ns NR:ns ## COG: PA1224 COG2249 # Protein_GI_number: 15596421 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Pseudomonas aeruginosa # 1 257 1 257 259 374 66.0 1e-103 MNVLIVYAHPEPKSLNGSLKNFTIEHLKNTGHDVQVSDLYAMNWKSALDASDAKTRRDDS YFDASLDSKYAFENGLQSDDIALEQRKLMWADAVIFQFPLWWFSMPAIMKGWVERVYAYG FAYGVGEHNDQHWGDRYGEGTLVGKRAMLMVTAGGWEPHYSERGINGPINDILFPIQHGI LHYPGFDVLPPFVVYHTSKVNTDNFPAICNQLGQRLDDLWHTQPIAFRKQNHGDYNIPQL TLKEDIAPEVTGFAAHIVTKQ >gi|316917754|gb|ADCU01000021.1| GENE 145 151718 - 152731 577 337 aa, chain - ## HITS:1 COG:ygiP KEGG:ns NR:ns ## COG: ygiP COG0583 # Protein_GI_number: 16130956 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 35 331 1 297 310 476 75.0 1e-134 MLFNKAKDVLSYNENRLGYSVNAAQEMRRMDNQTVLNQYPLPKDLQVLVEIVRCGSFSAA AESLGQTPAFVTKRIQILENIFGTKLLNRSARGVALTDSGKQCYEQGLNILTQLQKLMDD LGQTKTQPAGMVRIGCSFGFGRSHIAPAITQLMQLYPELQIHFELFDRQIDLSRDNIDID IRINDEIPDNYIARLLAKNKRILCASPKYFEKRNPPQTLTELLEHDCLITKERDSTAGIW ELECEHEKKTVKISGHLSSNSGEIILRWALEGKGIMMRSEWDVVPFLNSGKLIRVLPEYS QSANIWAVYQKPLYQSAKLRVCVDFLTQYCHDAFSEK >gi|316917754|gb|ADCU01000021.1| GENE 146 153077 - 153985 263 302 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 24 297 21 294 508 105 28 9e-46 MNEQKKQESINKLTQIVANFTAMISTRMPDDVVDKLKALREAETSSMGKIIYHTMFDNMQ KAIDLNRPACQDTGEIMFFVKVGTRFPLLAELQAILKQAVEDATVKAPLRHNAVEIFDEV NTGKNTGSGVPWVTWDLVPDGTDAEIEVYMAGGGCTLPGRSKVLMPSEGYEGVVKFVFEN ISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPIGTRHPNPKAAELELRLEEGLNRL GIGPQGLMGNSSVMGVHIESAARHPSTIGVAVSTGCWAHRRGTLLVHADLTSESISHTRG SL >gi|316917754|gb|ADCU01000021.1| GENE 147 153982 - 154587 253 201 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 2 182 314 493 508 102 31 9e-46 MKKILTTPISADDLTDIRVGDVIYLTGTLVTCRDVCHRRLIELKRPIPYDLRGKAIFHAG PIVRKNEDKWEMVSIGPTTSMRMETFEKEFIEQTGVRLIVGKGGMGPLTEEGCKQHKALH VIYPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEFGPLIVSIDTHGNNLIAENKK IFAERREPIVNEICEHVHYIK >gi|316917754|gb|ADCU01000021.1| GENE 148 154647 - 156098 715 483 aa, chain + ## HITS:1 COG:ygjE KEGG:ns NR:ns ## COG: ygjE COG0471 # Protein_GI_number: 16130959 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli K12 # 7 482 7 486 487 662 81.0 0 MPFFRNYWRYLAPLIVTLILASFPTPSGLELHAWLFFSVFMGIIVGLILEPIPGAVVAMV GIAIIAVLSPWLLFSPIQMSQTGFKFTTKALSWAVSGFSNSVIWLIFAAFMFGTGYEKTG LGRRIALILVNKMGHKTLFLGYAIMLSELILAPVTPSNSARGAGIIYPIIRNLPPLYDSQ PNSRSSRNIGSYIMWMGITADCVTSAIFLTAMAPNLLLIGLMKSATGMSISWGNWFLGML PLSIGLVLLVPWLAYIIYPPVLKSGHQVPQWAKEELVAMGPLCRKEKRMLILMAAALLLW IFGGAYIDAAMVGYSVVAIMLVTNIITWDDIISNKSAWSVFFWLASLITLATGLNDTGFI PWFGQRLSQGLSTYSPTLVMIALIVVFYLLRYFFASATAYTSALAPMMIAAAIGIPAIFC LMVGAAIGLGSILTPYATGPSPIYYGSGYLPTTDYWRLGAIFGVIFLLLLLITGFLWMPF VFT >gi|316917754|gb|ADCU01000021.1| GENE 149 156239 - 157000 579 253 aa, chain - ## HITS:1 COG:AF1706 KEGG:ns NR:ns ## COG: AF1706 COG0596 # Protein_GI_number: 11499296 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Archaeoglobus fulgidus # 1 122 7 123 238 67 36.0 4e-11 MKSFFISSLNAHLRYQDLPGNGLPIIFIHGLGCASSYEYPRVVMEPIFRQRRIILLDLLG AGYSDRPAAFSYSTSDHARIISMLIDTLDLPECDVYGHSMGGSIAIEVAAMLPHKVKTLV VSEPNFDSGGGFYSRLIAEQTEGEFVRVGYSRVLEKEKTPWLGCVSATAPYALHRGASSL VTGVEPTWRELIYSLSMKRWMIFGENSLPDVDQFELPKHGIQVLTIPHAGHSMSWENPEG LAKALCQAFSLAE >gi|316917754|gb|ADCU01000021.1| GENE 150 157170 - 157703 141 177 aa, chain - ## HITS:1 COG:ybcI KEGG:ns NR:ns ## COG: ybcI COG1988 # Protein_GI_number: 16128511 # Func_class: R General function prediction only # Function: Predicted membrane-bound metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 172 1 173 173 224 76.0 8e-59 MPTIVTHAAVPLCLGLGLGRKIIPTRLLFAGMVLSMLPDADVLSFKLGVAYANEFGHRGF THSLLFAFFVPILCLLGTRWFRASILRVWSFLTVSLLSHSLLDSVTTGGMGVGWLWPWSD ERFFAPWQVIKVAPFALSRYLTPSGFAVIYSELQWVWLPGFVFIGVLFLIRKIGMLR >gi|316917754|gb|ADCU01000021.1| GENE 151 158139 - 159260 1047 373 aa, chain - ## HITS:1 COG:ycfD KEGG:ns NR:ns ## COG: ycfD COG2850 # Protein_GI_number: 16129091 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 372 4 375 376 512 66.0 1e-145 MAYQLNLNWPEFLEKYWQKKPVVLKNAFPNFVDPITPDELAGLAMEPEVDSRLVSQKNGE WQASNGPFEHFDGLGESGWSLLAQAVNHWHAPSAELVRPFRVLPDWRLDDLMISFSVPGG GVGPHIDQYDVFIIQGMGSRRWRVGDKLPMRQFCPHPALLHVDPFEPIIDEDLEPGDILY IPSGFPHDGFTHETALNYSVGFRGPNGRDLISSFADYALENDLGGEHYSDPDLTCREHVG RIEDYEVDRLRGMMIEMLNQPEDFKQWLGRFATTPRHELDIAPAEPAYEPDEILDALLGD EVLTRLSGLRVLNIGDSFFVNSEPMDAVEPEAADALCRYTTVGKKELGDALNNPAFVAEL TDLVNQGYWYFDE >gi|316917754|gb|ADCU01000021.1| GENE 152 159438 - 161315 1424 625 aa, chain - ## HITS:1 COG:STM3139_2 KEGG:ns NR:ns ## COG: STM3139_2 COG0754 # Protein_GI_number: 16766439 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Salmonella typhimurium LT2 # 233 618 1 385 387 634 75.0 0 MCVNTTEKHAPFGTLLGYAPGGVAIYSSNYESLNDLEQMDDASFRHYLDKEYMGYKWQCV EFARRFLYLNYGTVFTDVRMAYEIFSLRYLRQVVNDNILPLQAFPNGCERPPVAGSLLIW QQGGEFEHTGHVAIITQVLDNKIRVVEQNVIHHPLPAGQQWTRELPLTYRDGKYAIQDTF NDTEILGWMTQTADDRHSLPQPQTPAPYLAIHCERVENHGQFAGTWLNEQDPLEHTYVQA NGGHTLNADPYRYFAVSRSAEQELIHATNELHLMYLHATDKVLKDDNLLALFDIPEALWP RLRLSWQRRRHHMITGRLDFCMDERGLKVYEYNADSASCHAETGLILDKWAQQAGEVAGS DPGEYLLDALANTWKHSDATPFVHILQDHDAEESYHAQFMQRALTKAGFESKILHGLDEL HWAESGQLVDGENRPVSCVWKTWAWETALDQLREESEADHAALPIRTGHPKNAVRLIDVL LRPEVMVFEPLWTVIPSNKAILPVLWSLFPHHRYLLDADFELNAELEQSGYAVKPIAGRC GNNIGLISHEDRVLDETSGKFAEQKNIYQQLWCLPKVAGRYIQLCTFTVGGHYGGVCVRS ETGLVIKKESDIDPLRIIDDKDFIL >gi|316917754|gb|ADCU01000021.1| GENE 153 161577 - 162497 686 306 aa, chain - ## HITS:1 COG:STM4032 KEGG:ns NR:ns ## COG: STM4032 COG0657 # Protein_GI_number: 16767297 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Salmonella typhimurium LT2 # 1 303 1 303 309 443 68.0 1e-124 MALEPAIAELVADFITKGRPSSRHQTFDERRAGYIASTVLAGEIEQRVTVEDRDIAGISL RVVSPLNAEGKLTAVIYYHGGCFVSGGFATHDNQLRQLAFLSGCRVIAVQYRLAPEHTYP AAHDDAERAADLIWQYADELNIERSQITLAGDSAGGHLALITALRLRDANRWLPQRLVLI YPMIDATASSESYKRNGDDYVLTRDTLLSGFEAYFPQTELMHPEVSPLWRDDFLGLPPVH ILTAEYDPLCDDGEVLFARMTEQGVSCSAQRYLGVIHGFFQLGGISPTARNAMRDIAAKI SSPYPL >gi|316917754|gb|ADCU01000021.1| GENE 154 162864 - 163505 247 213 aa, chain - ## HITS:1 COG:VC1720 KEGG:ns NR:ns ## COG: VC1720 COG3381 # Protein_GI_number: 15641724 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Vibrio cholerae # 1 197 2 208 220 92 36.0 5e-19 MQLFDDMARQRAQIYRWFSLLLFQELSDEALAGLRDKNNLALMNGLKFIPELLLPTRQFQ RRLCAALKRKARQQELAADFASLFLLPSPTGVSPYAGHYPHTTPSEERRIMRQWLVELAL VPKNNEATDHIAIQLALMAALIEVDPHSEILLAQQYHFLHQHLLVWLPLFSKRSYQRDNF GFYAAAIGLLLRFIQLDIEWIIDSFPMRDSNEG >gi|316917754|gb|ADCU01000021.1| GENE 155 163492 - 166002 1641 836 aa, chain - ## HITS:1 COG:torA KEGG:ns NR:ns ## COG: torA COG0243 # Protein_GI_number: 16128963 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 828 1 837 848 998 56.0 0 MDFNDFSPSRRRFITGVLAVGAANILAPQPLLSRVWAADEKPDLWIQSGSHFGAFEARVS NGEWIDTRPFKHDKFPCGMLKAVREIVYNPSRTRYPMVRLDWLRHRDRSDRSQRGDNRFV RVSWDQALDLVYQELERVQKHYGSSGVFTGLADWQMVGKLHKAGGAMDRGLGLHGSYVTT VGDYSAAAAQVILPHVIGSLEVYEQQTSLPLVIENTNTIVLWGCDPIKNLQIEYLVPDHD PFGYWLQIKERVAQGKMRVISVDPVRNKTQNYLNGEQLALNPQTDVALMLGIAHTLYQEK IYDSAFIKDYCVGFEQFLPYLLGEGDKQPKDAEWAAKICGLDADQIREFARLLVKGRTQF MGGWCAQRMHHGEQYPWMLVVLASMVGQIGLPGGGVGFGWHYNGGGTITSLGPVLSGLGS IANPLPPIHAADFRGASEHIPVSRLIDCLLSPGKQVAFNGETLMYPDIKMAIYSAANPFH AQQDRNRMIEAWKKLETVVVLDHQWTASCRFADIVLPVTTRYERNDVEQFGTHSNKGLMA IRQIVKPQFEARHDFDVFRGLCQRFGRDDVYSEKRDEMQWIKAIYQEGVKQGEATGVPMP DFDTFWNGEGYIEYPAGQPWVRHGDFREQPDLNPLGTPSGLIEIYSKTIADFHYEDCPGH PVWMEPFERSHGGKGAEKYPLHLQSCHPDKRLHSQLCSSEDFRKTYSVAGREPLYISPKD AKSRGLKAGDVARVFNDRGQVLVGVVISSDYASGVVRIHEGAWYSPLVGGKAGTLCTYGD PNVLSADIGTSQLAQGPSAHTALVQVERYREELPAVTGFGGPLEVISENGGTHAAI >gi|316917754|gb|ADCU01000021.1| GENE 156 166050 - 167183 545 377 aa, chain - ## HITS:1 COG:STM3823 KEGG:ns NR:ns ## COG: STM3823 COG3005 # Protein_GI_number: 16767108 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Salmonella typhimurium LT2 # 5 377 14 385 394 362 48.0 1e-100 MSWIRKKTLWLFIAGAAAMLMLVWGGWQGVHQTSTTEFCLSCHSMSSVGQEYKASIHFKN ASGVRAECKDCHIPPGIIPTLVRKTEAINDIYHEFVSPSINTPQKFESKRAELAQREWKR MSENRSAACKSCHAYDAMDHSKQSANAAAQMTPAALKDSNCIDCHKGIAHHKPNTSNGFR DQYKMLVQQSSSLPNASTLYALSEKSLSATVDGSADKALLMPATEVAVLQKQGNKVQIQI VGWRESSGRGRVITQYLGKRVFAAVLDPSLMPAVKILKTEVDPISHQEWQQISVAAWTSN DGFTASIEPVWQYADQMLQSTCSACHSVPPTTRYNANGWIAGLKAMSAYYRLNQQEERTL LKYLQTHASDTSESSPH >gi|316917754|gb|ADCU01000021.1| GENE 157 167374 - 168849 606 491 aa, chain + ## HITS:1 COG:alr4738 KEGG:ns NR:ns ## COG: alr4738 COG1167 # Protein_GI_number: 17232230 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Nostoc sp. PCC 7120 # 4 478 5 476 490 239 33.0 1e-62 MQEIELDRQCDIPLQLQIFQYYYQAITHGECIAGDMLPSIRELSRRLKIARITVTLAYEK LVANGYIKSRPGVGYHVCFARPVKPVGRKIPYFKGPAPTSLVPAEVPVDLYSQPAAEVYC KMGIPDPNAFPWSSWRKWNNAPSNLKEQLVTRYHSPQGLLSLRQEIVRYLRFSRGVDTQS ENIIITNGVQEGLSLLSQLFVLNKLATKTTPCHVVTESPCYSGAWHIFNYHGATITAVNV DKHGLCVAQLPEHPTQLCYVTPSHQYPLGCRLSLSRRKALLLWAQRVGAYVIEDDYDSAF SYEENPLPALKTMDTQDRVIYAGTFSKTLGPGIRLGYLVCPDALLPAVKNMKGLSNSGSN WLLQQFLADFMHSQVFYTHLSKLACEYEVRQRVLLKGLQHLFPQGKIWGHYAGLHLTLMT SLSPEIIQQLRARCLLSAVRFDTLHELKNGSEDVWAGHNAETAIFFGFGGLNATQLQKVL MVIEQELPFLT >gi|316917754|gb|ADCU01000021.1| GENE 158 169546 - 170343 526 265 aa, chain - ## HITS:1 COG:no KEGG:SBO_4355 NR:ns ## KEGG: SBO_4355 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 111 265 6 160 160 258 87.0 2e-67 MTQNNIKQLRTQLSITQRELAYMVGTSQQQIQRIETGKVAAKLGLAQTICNALDKPLNIV FPESDQLINDFHKKRRKTDEDLETIATSGIEMDSGLWTVKLWLQGQQDYLLLPISAADKR RFYYYFQEKNAPNTERFFVLDSSEYRYALNMREVVFHQFLSDGFAPIMSEEEDDYEDDYF NVHITLVNGGPVIPLSVEPDAPQNEEADDIGQLNAFFEKLDCEPETTDRYMLTDEDGEDA FIRIGSIAMVRVVLDALEPVEEDEE >gi|316917754|gb|ADCU01000021.1| GENE 159 170487 - 171332 746 281 aa, chain - ## HITS:1 COG:no KEGG:plu0136 NR:ns ## KEGG: plu0136 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 8 281 4 277 277 431 74.0 1e-119 MAGNNVNEPEVLTGHTDVICSTSIERIVTGRNAALTRIQSLISELDDISILTHDIGGGTA QEWGMREGHRYDCWFTEKTDKAMKAMTRNIDRRIWRELMNKSGMLSLMDAQARDEWHKSL EKDDIPAISEDNILSTFQQLHQSKGEVFERGVINVFKGLSWDYETNNPCYFGKKIIVNNL VKYDKWGYSLSWGWRRDQLADLERMLFLLDGKTIPDNRHDVTIRLMNFIRDNPRQQVFGD DLFTIRLFQKGSGHITFKRMDLVEKMNDIIAKHYPGMLAAK >gi|316917754|gb|ADCU01000021.1| GENE 160 171419 - 171805 194 128 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_3353 NR:ns ## KEGG: EcE24377A_3353 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 9 122 10 123 125 164 70.0 7e-40 MQTKLPFMRAASSRPSPVDVWQTLLTCLLEHHYGLTLNDTPFSDEQVIQQHIDAGISLAD ALNFIVEKYELVRTDRPGFSIREQSPFITAIDILRARKATGLMNRGTYKEVTAITRGQHP QASTSGKR >gi|316917754|gb|ADCU01000021.1| GENE 161 171862 - 172221 220 119 aa, chain - ## HITS:1 COG:no KEGG:EcolC_3445 NR:ns ## KEGG: EcolC_3445 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ATCC8739 # Pathway: not_defined # 1 118 1 118 119 178 77.0 6e-44 MSKKTTLTTHDISEPWWGLRRSISPCFGARLVQMGNRLHYLADRANFDCQFCDADLRHLD QAFPVLMKQLELMLTSGELNPRHQHGVTLYAKGLTCEADTLGSHGYVYIAIYPAPVTTE >gi|316917754|gb|ADCU01000021.1| GENE 162 172246 - 172467 239 73 aa, chain - ## HITS:1 COG:no KEGG:EcolC_3444 NR:ns ## KEGG: EcolC_3444 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ATCC8739 # Pathway: not_defined # 1 73 1 73 73 133 89.0 2e-30 MKIISKRQAMAIYHQHPHSRLFRFCTGKYKWSGSICHYAGRKVDDISGVLAVFAERRQDR NGPYVVLRSVSLN >gi|316917754|gb|ADCU01000021.1| GENE 163 172481 - 172960 224 159 aa, chain - ## HITS:1 COG:yfjY KEGG:ns NR:ns ## COG: yfjY COG2003 # Protein_GI_number: 16130559 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli K12 # 1 159 2 160 160 164 55.0 6e-41 MEKQLPLFAYELTASAQQTIREALTLLERQLREPGASFTSSSSVRDWLRLHLTMEEREAF VLLLLDNQHRLITHETLFKGTISHTEVHPREVVKTTLKYNAAAVIVAHCHPSCHAEPSQS DRRVTERLRNALDLVGVRLLDHLVIGGMDIVSFAERGWL >gi|316917754|gb|ADCU01000021.1| GENE 164 172972 - 173421 373 149 aa, chain - ## HITS:1 COG:no KEGG:EcolC_3442 NR:ns ## KEGG: EcolC_3442 # Name: not_defined # Def: antirestriction protein # Organism: E.coli_ATCC8739 # Pathway: not_defined # 17 149 23 156 156 239 82.0 3e-62 MDKRISLPPEVTEPFILTATVVPDEERLRFWPQRFGSIPQWITLEPRIFAWMDRLCVDYS GGVWNFYTLSNGGAFMAPEESDGLWSLFNILNGNGAEMSAEAAGIAACLMAYSHHACRTE CDAMTEHYYRLRDYALNHPECNAIMHIID >gi|316917754|gb|ADCU01000021.1| GENE 165 173454 - 174275 569 273 aa, chain - ## HITS:1 COG:no KEGG:ECO103_5084 NR:ns ## KEGG: ECO103_5084 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 273 1 273 273 479 86.0 1e-134 MKLASRFGRVNQIRRDRPLTREELMSHVPSVFSEEKHESRSERYTYIPTITLLESLKREG FEPFFACQTRVRDQSRREHTKHMLRLRRAGQLTGHQVPEIILLNSHDGSSSYQMLPGLFR GVCTNGLVCGQSFGEVRVPHKGDVVEKVIEGAYEVLGIFDRVEEKRDAMQSLMLPPPAQQ VLAQAALAYRFGEDHQPVTAAQVLSPRRYEDRSNDLWTVYQRVQENLMKGGLPGRTAQGK CSRTRAVNGIDGDVKLNRALWVMTENMLALSDR >gi|316917754|gb|ADCU01000021.1| GENE 166 174573 - 175559 236 328 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAGKNRMIVNFSSKKLRDLIVEIAEKNHMSHSKVIEKLVSFRLFESNGDPVIDAFCDASK TVMEQQQKNDGEFNVALRTPYIKHNVRLYKVFGDLSGKFSITVNHINNEKLNALNFEKEL RKLIEDKINGTKPHEWEGVFDSARITFADLWLIFFNKINVEYKVERRGSNFSEVSVKYKA SDVCCIPFSFNKHASLKEKYCNAMNHLDFSSVRYHTFKSVATKGWCRNKYSHLLFIHQSS SSDKGGFFIGVQYEKNDVTFSDESPRSPFVHPEGTHMYTEKDSAEDLYSLHRYAPYSDVN PELKISIYHEPANIKIQNLNPELKSKIK >gi|316917754|gb|ADCU01000021.1| GENE 167 176198 - 176839 201 213 aa, chain + ## HITS:1 COG:no KEGG:PMI3479 NR:ns ## KEGG: PMI3479 # Name: not_defined # Def: hypothetical protein # Organism: P.mirabilis # Pathway: not_defined # 12 212 7 195 195 128 38.0 1e-28 MSKKTSGKNVSNQHYARRITETIDKALEYYPRLLAVRFDLRFPDEEERLDCPTRYYDYPD VISRFIDSVKSQIAEDIKRKRKAGKGSLTCKMRYFWVREINQEESKHHYHVVLLLNKDAY PWPGKRHTETSFDRYSVFQKVINAWIRAIKRTDSDKDFHGLIHLPVSGFYQLNRNNPDFK ADYEELTERAMYLAKERSKDKSDGYRNFGCSQN >gi|316917754|gb|ADCU01000021.1| GENE 168 176946 - 177161 241 71 aa, chain + ## HITS:1 COG:Z1188 KEGG:ns NR:ns ## COG: Z1188 COG3311 # Protein_GI_number: 15800709 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 1 61 2 64 65 78 60.0 4e-15 MTTQNNNTSLLNDKMVDMAFITRFTGLTDKWFYKLIKDGEFPKPIKLGRSSRWMQSEVEA WVQQRISQSRK >gi|316917754|gb|ADCU01000021.1| GENE 169 177403 - 177903 168 166 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2074 NR:ns ## KEGG: ECS88_2074 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 9 134 33 161 165 77 36.0 2e-13 MHKSTLHNLKLYLALDSDGHYVISKEMKNASDAQWFCPSCSCPVKLRNNIPGEDAWFVHN PDEATKPLLANCGYLNTEIKRRVFILRLRTMIDELETLTATRYWFCVWCKAHYEGEKHCK ACNTGIYSISHGDWCWNYNHKENTPEISDHTAININHHHQTACIPS >gi|316917754|gb|ADCU01000021.1| GENE 170 178045 - 178338 150 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSHKKEHTVMVNNVLRELARQQGQTAEAVLEQLFCRASIVNTGLLNESFREAFRQHYPGE PFNHVTWCPFCQCFDLMQRSEPMVQDEACWTFSSTQF >gi|316917754|gb|ADCU01000021.1| GENE 171 178343 - 178774 262 143 aa, chain - ## HITS:1 COG:no KEGG:CYA_1992 NR:ns ## KEGG: CYA_1992 # Name: not_defined # Def: S24 family peptidase (EC:3.4.21.-) # Organism: Cyanobacteria_CYA # Pathway: not_defined # 22 85 9 71 218 68 50.0 5e-11 MESYQNKMTWGEPPLPKGPEHFGERLKTVIGKQSVASFARDCGVSEASMRKYLKTDTVPG IDSVAMIAACTGRSLTWLITGEGDPFTDNARQKCFSEEEIKKWWTLIFDALDTDDKYSVI KAFQQGGLNAVFNSEVMTGKRKG >gi|316917754|gb|ADCU01000021.1| GENE 172 179062 - 179649 483 195 aa, chain + ## HITS:1 COG:no KEGG:CKR_2303 NR:ns ## KEGG: CKR_2303 # Name: not_defined # Def: hypothetical protein # Organism: C.kluyveri_NBRC # Pathway: not_defined # 48 192 44 187 191 72 32.0 9e-12 MKNEPVPYSTVASFTPGAHVSRIRQNDEAKACRFYATEQFMSDCWQPGNTMNGDKEQVVR PTQAVLSVRTGDVVISLIHRKAAIVSPEHAGRLLSNNYVRVEVDSRKVVPAWFVWHFNES RESRRQQALATQGSTFVLRLSLTEVRQFTATLPPLNKQKAIGGLYLATIEKRHYQERLAA LNEQQILSQLSDMIQ >gi|316917754|gb|ADCU01000021.1| GENE 173 179691 - 181298 1338 535 aa, chain + ## HITS:1 COG:alr0499 KEGG:ns NR:ns ## COG: alr0499 COG0286 # Protein_GI_number: 17227995 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Nostoc sp. PCC 7120 # 12 528 11 537 537 699 65.0 0 MSPQIEAQNLSELQSRLWNIADTLRGKMNADEFRDYCLGFIFYKYLSEKFVTYANKILKE DGIKYNELTAEHPAYQDIIDAVKDDSIQTLGYFLPPTDLFHTMAQRVAKDQKGAGEGFIL EDLATTLRNIEQSTLGTDSADDFSNLFEDLDLGSSKLGNTAKAKNELIGKVITELDKLSF NLSEASSDILGDAYEYLIGQFASGAGKKAGEFYTPQPVSTLLAKIVTTHKLKLKNVYDPT CGSGSLLLRVKREASSVGKIYGQEMNRTTYNLARMNMILHGVHYADFEIMQEDTLEHPQH THLKFDAIVANPPFSAKWSASPLFMNDDRFAQYGKLAPSSKADMAFVQHMFYHLEDDGTM AVVLPHGVLFRGAAEGHIRKFMIEQQNCIDAVIGLPANIFYGTSIPTCVLVLRKCRKHND GILFIDASNDFEKVKTQNRLLPEHIDKIADTYNDWKALEKYSHIATLEEIRNNDYNLNIP RYVDTFEAEDEIDLNAVAKEIRNLEGKVGEIDKVIAGFCKELGIDAPFAKVKEGK >gi|316917754|gb|ADCU01000021.1| GENE 174 181298 - 182485 551 395 aa, chain + ## HITS:1 COG:SA0392 KEGG:ns NR:ns ## COG: SA0392 COG0732 # Protein_GI_number: 15926110 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Staphylococcus aureus N315 # 207 394 20 208 403 171 50.0 3e-42 MVPKLRFSEFSGEWENDLFGRIVTNKSSKYNPSTESKDLPCLEMDSISQEDGRILHIYSA KQQVSIKNKFSAGDVLFGKLRPYLKKYILAPFDGACSSEIWVLNGLTINNSFLFCYIQTK KFIEAANKSSGSKMPRADWSVISSEMMFFPLKEEQNKIAEFLSSVDEKIMLLNKQYDLLC QYKKGMMQKIFSQELRFKDDNENSFPQWSILQLKDIAIRVTRKNKENNNTILTISGKDGL VDQMTYFNKQIASKNVTGYFLIKKGEFAYNKSYSQGYPMGAIKMLSNYEKGVVSTLYICF KLNDEQSCGFYQHYFESGLQNRAIEKVAQEGARNHGLLNIGVNDFFDIELQVPSLAEQDK IAHFLSAIEDKIAIKRAELDMLKNWKQGLLQQMFV >gi|316917754|gb|ADCU01000021.1| GENE 175 182544 - 185459 2141 971 aa, chain + ## HITS:1 COG:SA0189 KEGG:ns NR:ns ## COG: SA0189 COG0610 # Protein_GI_number: 15925899 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Staphylococcus aureus N315 # 1 926 1 891 929 706 44.0 0 MATQSEYELETQLVNQLVGMHYELVNVTDETSMKANLRKQIEIHNRLEAAPLTDSEFNRV FLHLTKGNEVIDRARILRDRYQLLRDDGTEKWLSFINKDEWCQNEFQVTRQVKQFNAEQN TRKTRFDVTLLINGLPLVQIELKRRGLGLKEAFNQIDRYHRDAFWVGSGLFQYVQLFIIS NGVDTKYYANNRANHFEQTFFWTDEKNEPIKSLEKFTEAFLKVCHIAKMITHYTVLNETR KCLMAMRPYQYYACEAMIRHVKDNLHLQGKPRNGYIWHTTGSGKTLTSFKASQVIMSMPE VDRVIFVVDRRDLDYQTAKEFNSFAKDSVDTTNNTSTLIKQLKANNSKLILTTIQKLNNA ITHEGYKAHLEHLRKERIVFIFDECHRSQFGDTHKAIVSFFENAQLFGFTGTPIFADNVN ITNGVKQTTEMLFDKCLHKYVIVDAIRDENVLRFAVEYVGTYRRKETSNEIDIDVEDIDT KEVMESDIRLGKITDYILAHHNAKTRSREFTAMFCVGSVDMLIKYYKLFKDKQAELQQTD LGYKPLRIATIFTYSANEADKSDKEAVNDLLDEEDISLPQGGKIDISSRDHLDSFIKDYN TLYGTSYSANDSQSFYNYYKNIAQRTKEKGIDILLVVNMFLTGFDSPALNTLYVDKNLRY HGLIQAFSRTNRILNEKKSHGNIVCFRNLKKATDDAIALFSNKDASSVVLVKPFEEYLSD YQAAVDTLLTLTPTVESVDSLPDEKAQLAFVTAFRDMMRLKNILESFADFDEVSKPLSDQ TLADYTSKYLDIYDKVKKRTGKDKVSILDEVDFEVSLIHRDEINVGYILRLLAGIQAMPP EAQQEQKKKVMDIVDSDVTLRSKRELIDNFIEENLLHVSHDEDITQTFETYVEREKRKAV ATLCSEEKLDESKVAALLDNYLFTDVTPREDEVARALTWTPKILERKTVLKRVYDKVCGV IDTFINGMRGF >gi|316917754|gb|ADCU01000021.1| GENE 176 185763 - 186158 149 131 aa, chain + ## HITS:1 COG:no KEGG:Sputcn32_3526 NR:ns ## KEGG: Sputcn32_3526 # Name: not_defined # Def: hypothetical protein # Organism: S.putrefaciens # Pathway: not_defined # 1 129 56 184 185 169 71.0 4e-41 MLIPILLTWISLLLSSRLGKDEFKEGEVVSVEHANNSFLPSYLGYFFVALSITSWSALFF VYAVLFIFTFMSQALYFNPLFLLFRYEFYNIKNKSGASIFLISRHKYKTPKEIKIPVAFR INNYTFIERKK >gi|316917754|gb|ADCU01000021.1| GENE 177 186158 - 186988 99 276 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3314 NR:ns ## KEGG: EC55989_3314 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 276 1 276 276 353 64.0 4e-96 MNNIFAKVKGPRKKPFFKLVSDYTLFDALDLSTLSLIPYNPDHNLDEDSWFKIENFSQQS FCLSCIKDEFDSKDFDDLTKQYFAKISYIFSHQNEDFYFQKITPSLFIKRKTIAFGESAE IEENEGRLIVNHIPDAVYLKERNILLFRNLATISSIFKGIDILYKEATEEEVKSFLSESF IVLSTDYDVEKVSKPNRKRIALAMDTLAAMPVEDRGEMLNYINDYCAEKLKYDTTESKFE VSSEEELKYLLYGIEQRFYTTRFGNEKRLANSIQRL >gi|316917754|gb|ADCU01000021.1| GENE 178 187157 - 188797 333 546 aa, chain + ## HITS:1 COG:SP1251 KEGG:ns NR:ns ## COG: SP1251 COG1401 # Protein_GI_number: 15901112 # Func_class: V Defense mechanisms # Function: GTPase subunit of restriction endonuclease # Organism: Streptococcus pneumoniae TIGR4 # 221 546 263 619 643 179 34.0 9e-45 MKSRLKNLYKHLIENHKHELKGWHDAYREFYEQVGQIRERIKSGKELSPSDEIFLKQLIF ERSNGIASRGQSVLSNENFDGFIKNKDFIAILQQFILNPNREELKKFECTWSEHGKSNNP VLINRVAAACTLEVSTTVDSAKFNQVFSWLTHEGIIPAYPAENNQDWFSKNVFLMKIIKN EFNDELRNNETDEFYLSQFVWVLYENLSNPFSLKKQIVKYGPPGTGKTYQARQQTSLLFD IWKEEFAPNSSLTHSSQIELIQFHPSFSYEDFMEGLRPVLDNNGKAQLTLINGVFKEFCR NAGKWEMDIERLDLNRDWESITIGELRTYQNKLSGGHWEYIFEISDFSKLIADAVPPFFF IIDEVNRAELSRVFGELMYCLEYRGIKGSVKTQYANLNNQQTGMLHTAQGYQFFIPTNIY LIGTMNTIDRSIESFDFALRRRFRWEEVTPDTRLLRYHLSQFCKAWTPLADNLERLNTQI TKEPLLGADYQIGHAYLMNLKYARSLTVTEVRSRIWDDCIRPLLQEYLRGSNESELIDSF AKAFGI >gi|316917754|gb|ADCU01000021.1| GENE 179 188801 - 190237 250 478 aa, chain + ## HITS:1 COG:SP1250 KEGG:ns NR:ns ## COG: SP1250 COG4268 # Protein_GI_number: 15901111 # Func_class: V Defense mechanisms # Function: McrBC 5-methylcytosine restriction system component # Organism: Streptococcus pneumoniae TIGR4 # 100 460 65 438 442 88 26.0 3e-17 MWLFDIIKDGTLVDNRSYFANNGIFTNKSLGESISLNFKTKGQRTNIKNDESTIWHFLNS VSHDVENKLNNNLANALILFNDREYEHNTDDGFITVNGTDSRNFTLNTGNLIGFVKRGEY SLKVGSRFGNAFLRYIIADADGFLEMENIGGENHTEGYEWLLAYLWNIKLKKAYRLGIPK TYITKKERNSRIRGTIDTIDYFRNNTSGKYLCTYREHSYDSPATSLFIKAYETIEHQSFC KHTRNIYNAFITANLGVRRSRQEILRTPYFTNPFYNDYNILIDLSKKIINQEGSDFGYQQ ESSAFFFDISMLFEYFIRKILKRSGIRMLSKFERNYEIPTGAFGSYVRKIEPDLVFENDG GMYVFDVKYKTFDPQFGVKREDIFQLHTYIGQYGNGGLIKGCGFIYPISENRWNALNMDK THGVISDEIHQQGKDIHFYLLFLKIPNNSAPEFNKRMSEECHMFIENINTKVLKNENR >gi|316917754|gb|ADCU01000021.1| GENE 180 190431 - 190907 179 158 aa, chain - ## HITS:1 COG:no KEGG:Pecwa_0460 NR:ns ## KEGG: Pecwa_0460 # Name: not_defined # Def: hypothetical protein # Organism: P.wasabiae # Pathway: not_defined # 1 153 1 157 175 129 45.0 3e-29 MENINTLKAKIDTKVTKFVLLSVVTGGIYPMMWLYLNQPKLTEHIHNDFVAKDYPLWLAI VTGFGWLLTDISYSVSESETVLDHIATLLSVASTVMIIVWAFKAKTALQAYALNEFKFEL KMNPFYTFIFSIYYIVYCINDMESELQKHNIIYSKQIS >gi|316917754|gb|ADCU01000021.1| GENE 181 191336 - 191752 301 138 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKILGGAMLLAAGMFSISVYANPDNSCDGEQTIFDAYTVKGGKHVGVCYVYGNIRYVYG KDDNPEILINVPREKVDFSLSGNGDQSVTIPNGEYRYEIGEYLRGGPFIQVWKGSKFITE IKLNGANFENNIEQYINN >gi|316917754|gb|ADCU01000021.1| GENE 182 191807 - 192694 568 295 aa, chain - ## HITS:1 COG:ykfA KEGG:ns NR:ns ## COG: ykfA COG3596 # Protein_GI_number: 16128238 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli K12 # 8 294 7 288 288 258 48.0 1e-68 MEYKEKGGFNPVKDALEILPENIRESISRRINEVINYEPVIGIMGKTGAGKSSLCNAIFK GDICAVSDVEACTRETQEVRIQFGKRAIRLIDIPGVGESAVRDGEYEKLYRELLPKLDLV LWVIKGDDRAFSADEHFYKNVLKPAGGEEKTLFVLNQVDKIEPFREWDVQNAQPSPAQKK NILDKKTYITHRLGFTDHPVIAVAASEGYNVTQLVEAMVRALPKHAQSGVASQVREEHKT KNVIEEATEGFGDTVDRVIDEFIDASLPKPVASVVKAAKKAVVSGLKKAWNFFFG >gi|316917754|gb|ADCU01000021.1| GENE 183 193037 - 193327 230 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|183597546|ref|ZP_02959039.1| ## NR: gi|183597546|ref|ZP_02959039.1| hypothetical protein PROSTU_00824 [Providencia stuartii ATCC 25827] # 5 96 7 94 94 92 63.0 1e-17 MTTICPQCGSDRVSERNIGRKAGGIAGGVAGALSGAGTGAAIGSVVPVVGTATGAVIGAI LGRFVAGATAGAVTGASLDGVLFDQYECRDCEHTFD >gi|316917754|gb|ADCU01000021.1| GENE 184 193452 - 194723 384 423 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 14 402 16 402 406 152 28 2e-35 MALTDTKVRCAKPEEKEYSLVDGDGMSLLVKPNGSKYWRFRFRFGGKQHLMAFGVYPEIS LADARKKREEARRLVAAGIDPREHKRAVKEEQAKEIITFEKVAREWLATNQKWSEDHANR VKKSLEDNIFPAIGTRNIAELGTRDLLAPIKAVELSGRLEVASRLQQRTTAIMRYAVQSG LIDYNPAQEMAGAVASGNRQHRPALELKRIPELLEKIDGYTGRPLTRWATELTLLIFIRS SELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRGSKMRTPHLVPLSKQALAILKQIKQ FCGEHELIFIGDHDPRKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLIESGLWSK DAVERQMSHMERNSVRAAYIHKAEHLDERKLMLQWWADFLDSNREKSISPFDFAKINNPM LTR >gi|316917754|gb|ADCU01000021.1| GENE 185 195058 - 195321 61 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRVRYVGVTVAFQFDSNGLIHINNIGLNVFYEQGLPGLDCFKIRTQWRLLNAHIADKRSF LPTRQTSINIKRQVWHVDVLCRHEHSV >gi|316917754|gb|ADCU01000021.1| GENE 186 195437 - 195901 206 154 aa, chain - ## HITS:1 COG:ECs5252 KEGG:ns NR:ns ## COG: ECs5252 COG1396 # Protein_GI_number: 15834506 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 277 92.0 6e-75 MKKTLRIQFGERVKELRIATGMSQEAFADRCGFARSYMSRIERGGSNASLDAIEVLAGAL NVEPWRLLVSDLSEDTDPELLVPYAADGSCFHPGLASTRDGSFGVGDKASQKRFGTFSEA LEYLRSMETAKWRRPNASGNWGIVSAVRWDKLRK >gi|316917754|gb|ADCU01000021.1| GENE 187 196168 - 196638 223 156 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C0291 NR:ns ## KEGG: UTI89_C0291 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 156 10 165 165 258 78.0 6e-68 MVAGAALSWASYSVVAHVTSKRQISTLRAIAWGTLGTLSLVLGVCAFSAVGAEHQTARKD IVCSDDNPECYAKTHHNPVRECKQVMDKKATFRHVWQESEAQPVFNTYLWHDENKRTIQM FGQQAKAINSLGMLTPLQYFCIFNANTGEVIAASFE >gi|316917754|gb|ADCU01000021.1| GENE 188 196688 - 197536 257 282 aa, chain - ## HITS:1 COG:no KEGG:GAU_0079 NR:ns ## KEGG: GAU_0079 # Name: not_defined # Def: hypothetical protein # Organism: G.aurantiaca # Pathway: not_defined # 1 279 1 276 277 297 52.0 2e-79 MAYTATVIPVMIASPGDVTEERRIIREVIHEWNDINSALSKVMLIPIGWETHTSPELGMR PQELINQRLLVDCDLLIGAFWTRLGSPTGDEASGTVEEIHKHLDAGKPAMIYFSSKPVVL DTVDMGQYDALKAFKQECMQQGLIETFNESTDFKHKLYKQLTLTLTNNSYLKNIINSYRS EGTDNLKQESPKMLLSEDATFVLKMACEDESGGILILEHLDGTDIHVGGQSLGGENAREV AKWKSALDELKSNELISSRDYKGVQFEVTHKGWTLFESLKNK >gi|316917754|gb|ADCU01000021.1| GENE 189 197550 - 198110 267 186 aa, chain - ## HITS:1 COG:ECs5249 KEGG:ns NR:ns ## COG: ECs5249 COG1961 # Protein_GI_number: 15834503 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Escherichia coli O157:H7 # 1 186 3 188 191 286 85.0 2e-77 MAIFGYGRVSTSQQDTENQRLELEQAGWAFDFWFTDVVSGKTPAMQRKAFSELLGKIRDD ETLVVAKLDRLGRDAIDVLQTVRVLSDRGIRVIVHQLGNTDLTSAAGKLLLSMLAAVAEM ERDLLIERTQAGLTRAKAEGRKLGRPSKIAPEARGAIVVKKNSGTSVSALAREYGVSRAT IAAIVD >gi|316917754|gb|ADCU01000021.1| GENE 190 198320 - 198751 138 143 aa, chain + ## HITS:1 COG:no KEGG:Clim_1762 NR:ns ## KEGG: Clim_1762 # Name: not_defined # Def: hypothetical protein # Organism: C.limicola # Pathway: not_defined # 7 141 10 139 143 75 31.0 7e-13 MLDSLLPYLPFAGVVIGAFLQYVFTRQIEYKRALRDMKTKSYMDYLKGVCEQAQALNIPD KKIADERRSEAFIKVADAKARICLYGSKRVIEAFAEFERLGASMATKPQRDAFISMTVEM RKDTGLASMPSGEDLTLVLLGAR >gi|316917754|gb|ADCU01000021.1| GENE 191 199502 - 200080 167 192 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290511296|ref|ZP_06550665.1| ## NR: gi|290511296|ref|ZP_06550665.1| conserved hypothetical protein [Klebsiella sp. 1_1_55] # 15 189 1 175 176 303 80.0 4e-81 MPLSSYYQAQPDGYVRFDWRGNSIEGEFFSYEECGRDIDPKWGYIRPFDRVIRQQLIDNL QATHGVDLQTFTSQGDLITCDAFATHKNLQESHQLIIESFDFVDESELTTHKQIIGSCRV DLLRRQYIVGSNLKEPKESLDSLNAEFLRWVTPFYTPLRYERKWFTKHRRRLLRIGWLVA VTVVAYLYYIGQ >gi|316917754|gb|ADCU01000021.1| GENE 192 200177 - 200728 285 183 aa, chain + ## HITS:1 COG:no KEGG:AB57_2683 NR:ns ## KEGG: AB57_2683 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 21 147 3 126 162 99 39.0 7e-20 MNKVMMKTVLASLVVSSITVLTGCVTSPDMEAAKQPLGSIVSVVNVPGVKKDALYSSSKI WVAKAFTDSNSVIQYADKEEGSIVGKGNVKYPCDGFNDCLANEDVRYKFTMKIDTKDDKA RITFDDIHIYRPAHVTSGIAFPAIDSPNMTVGGQAKAKKALNDIVEQYKREIVTESSSAS KDW >gi|316917754|gb|ADCU01000021.1| GENE 193 201082 - 201414 136 110 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_5790 NR:ns ## KEGG: ECH74115_5790 # Name: not_defined # Def: nipsnap family protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 110 1 110 110 208 93.0 6e-53 MRTVEILQYTLRKGSGAAFHAIMQEISVPLHQSHGIDVVSFGNSLHDLDCYYLIRAFDSA ESMTAVLDAFYASADWRSGPREDIVGSIENCIKTVISLPQESVEELRVQS >gi|316917754|gb|ADCU01000021.1| GENE 194 201551 - 203455 667 634 aa, chain - ## HITS:1 COG:ECs5242_2 KEGG:ns NR:ns ## COG: ECs5242_2 COG0582 # Protein_GI_number: 15834496 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 430 632 1 203 205 366 85.0 1e-101 MSHRYKLYRRTSGIYVVRISIPQRFRRYAGQCEIHTSTGTHDLHEAKQKSALLLAVWYQT LQEYEQLDYRTLSDCAPLLAGEGMISLANFSQSIELPVAQLIQAVMNRNLPAFWLATGQV GFYVETLSEAELDPLDGSYVLNYGEEQGIEGVAKGYLQLTAQPAHLRNIISDGYSEASVF KTVGSEAKGGWFFTSNCPVIKPDTLLINKIHAESLRLDWLAKSTPPAISVSHAAPLTVSA ITNEYVHRKHYAKNLSWLCSEYVKHRSKGKVSESAISDIRNYFAFMIEAMGDIQLEKLDR DFFRAYESKLRTIPANRNLVKAKYEVKTLDELIVKAAECGDKLMTEESVRKYINGLYGAM KWAVDDGKLLKSPCENFFPRDDKDERDQDHTDVFEPNEVKAIFSLPWFMAGTGERNAQGR FHQYCPFHYWAPLLGLLTGARVNEIAQLLLDDILAEDDVYYLNLESDSESGKKLKNANAR RKIPIHSTLIDLGFIDYVNALKNAGYVRLFPELKPHKTKGYGRPVSSWFNESLLARRLNV KRNRTKSFHSFRHSVSTLLKEKGVSPELRAQLVGHVRGETETEVRYSKDLKPIHMIEVVE KIDFSLPELAKFNIPDGLDAVRDALRRKRSKQAD >gi|316917754|gb|ADCU01000021.1| GENE 195 203953 - 204360 355 135 aa, chain + ## HITS:1 COG:STM2910 KEGG:ns NR:ns ## COG: STM2910 COG4460 # Protein_GI_number: 16766216 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 5 129 2 122 126 110 42.0 8e-25 MSSNNPYIVEVIESHELIQQWFANTPVEADVCERLLSHFSPSFTMVGVSGHALSYSALCA FFQANGGAKQGLKIEVSAIEIISEWENGAVLSYQEQQSLPDQAASLRYSTVVFEKDLQGK VLWRHLHETKANNGT >gi|316917754|gb|ADCU01000021.1| GENE 196 204416 - 205336 1052 306 aa, chain - ## HITS:1 COG:STM0837 KEGG:ns NR:ns ## COG: STM0837 COG1376 # Protein_GI_number: 16764199 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 306 1 306 306 429 68.0 1e-120 MKMSIRALFTVLLAATACMQSAFAVVYPLPANNSRLIGENIQVKVPDDSKLPLEHFAAQY QMGLSNMLEANPGVDTYLPKPGMTLTIPHQLILPNAPREGIIINSAEMRLYYYPKGSKTV VVLPIGIGELGRDTPMNWVTSVQRKKAGPTWTPTKKMHEEYAANGEILPQVFPAGPDNPM GLYALYIGRLYAVHGTNANFGIGLRVSHGCVRLRDDDIKYLFDNVPVGTRLQFINEPVKA TVEPDGSRYIEVHNPLSTTEQQFNSDAPVPVVLTDAINKVIADPSVQTSAVDNAIAARSG MPIKIN >gi|316917754|gb|ADCU01000021.1| GENE 197 205663 - 206814 625 383 aa, chain + ## HITS:1 COG:YPO1224 KEGG:ns NR:ns ## COG: YPO1224 COG1680 # Protein_GI_number: 16121513 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Yersinia pestis # 1 382 1 388 388 499 66.0 1e-141 MDKRVLKFFPATLLAVACALIPISAFAQQPEPLASQVVDGYAEHIFYNSGAAAMALVAID NNQQVFRSFGETRPGNDIRPRKDSLIRIASLTKLMTSEVLVKLADERKVSLYDPLRKYAP KGMRVPSYSANQPIVLMNLASHTSGLPREQPGGVPHRDVFTWPTKSDRWQWLKSAKITVP PGVRASYSNLAFDLLADALAQATGKSYPSLLKEKVTQPLGMKDTTYTPSPEQCSRMIVPA RGASPCQNSLAAIGSGGIYSTPEDMQRWMQQFLSSATQPRSPYAQQLLKMYYQREKLTMI KGMDVPGKAAALGLGWVYMAPQNGLPGIIQKTGGGGGFITYMALIPEKNVGVFVVVARTE LSKFTNMSDGVNQLVSELAQKNQ >gi|316917754|gb|ADCU01000021.1| GENE 198 206889 - 207959 886 356 aa, chain - ## HITS:1 COG:STM4480 KEGG:ns NR:ns ## COG: STM4480 COG0795 # Protein_GI_number: 16767725 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Salmonella typhimurium LT2 # 2 356 4 360 360 513 77.0 1e-145 MLGVLDRYIGRTIFSTIMATLFMLVSLSGIIKFVDQLRKVGQGDYSAAGAGLYTLLSVPK DIEVFFPMAALLGALLGLGMLAQRSELVVMQAAGYTRMQIASSVMKTAIPLVILTMAIGE WVAPQGEQAARNYRAQQMYGGSLLSTQTGLWAKDGTDFIFIQRVTGEKSIQGVSIYSFDN ERHLQKLRYANSATFEGHQWKLSQVEESNLTDSKRITGSQTLNGVWKTNLTPDKLGVVAM SPDSLSISGLYHYVKYLKQSGQESSRYQLNMWSKIFAPLSVAVMMLMALSFIFGPLRSVP MGVRVLTGISFGFFFYVLDEIFGPLSLVYSVPPVLGAILPSLLFLLISVYMLLRKS >gi|316917754|gb|ADCU01000021.1| GENE 199 207959 - 209059 840 366 aa, chain - ## HITS:1 COG:YPO3440 KEGG:ns NR:ns ## COG: YPO3440 COG0795 # Protein_GI_number: 16123588 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Yersinia pestis # 1 362 1 362 364 481 72.0 1e-135 MIIIRYLVRETFKSQIAILFILLLIFFCQKMVRILGAAVDGEIPTNLVLSLLGLGVPEMA QLILPLSLFLGLLMTLGKLYTESEIVVMHACGLGKGVLIKTAMILAFITGAFALVNAFWV SPWSSFHSDEVMAEAKANPGLASMVEGQFQPSKDGNYVLFVGDVKGKKFENVFLAQLRPN GTQRPSVVVADTGHMEGRPDGSQQVVLDTGTRYEGTALLRDFRITDFVNYEAVIGHQAVV LNPSNADQAPMQALWDSNEKDFRAEFHWRITLVFSVFVMALMVVPLSVVNPRQGRVLSML PAMLLYLIFFLLQSSLRSNAAKGKIDPFIWVWVVNGFYLLLAIALNIWDTLPMRRIRARM TGKGVA >gi|316917754|gb|ADCU01000021.1| GENE 200 209735 - 211246 1372 503 aa, chain + ## HITS:1 COG:YPO3441 KEGG:ns NR:ns ## COG: YPO3441 COG0260 # Protein_GI_number: 16123589 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Yersinia pestis # 1 503 1 503 503 959 92.0 0 MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKVGQTL LLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGR NTYWKVRQAVETAKETLYTFDQLKSNKAEPRRPLRKMVFNVPTRRELTSGERAIQHGLAI AAGIKAAKDLGNMPPNICNAGYLASQARQLADSFSPNVSTRVIGEQQMKELGMNAYLAVG QGSQNESLMSVIEYKGSKNPDAKPIVLVGKGLTFDSGGISIKPADSMDEMKYDMCGAASV YGVMRMAAELQLPLNIVGVLAGCENMPGGRAYRPGDILTTMNGQTVEVLNTDAEGRLVLC DVLTYVERFEPDVVIDVATLTGACVIALGHHLTGLMANHNPLASELISASEQAGDRAWRL PMMDEFQEQLDSNFADMANIGGRPGGAITAACFLSRFTRKYSWAHLDIAGTAWRSGKAKG ATGRPVAMLSQFLLNRAGLNGDD >gi|316917754|gb|ADCU01000021.1| GENE 201 211375 - 211824 363 149 aa, chain + ## HITS:1 COG:YPO3442 KEGG:ns NR:ns ## COG: YPO3442 COG2927 # Protein_GI_number: 16123590 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, chi subunit # Organism: Yersinia pestis # 1 149 1 149 149 231 76.0 3e-61 MKQATFYLLEHHQPDGELDAVEALACDLAAEQWRSGKRILIACQSQEQAVKLDEALWARD PHQFVPHNLAGEGPHYGAPVELSWPGKRGNAPRELMICLQTEFADFATAFHEVIDFVPYE DALKQLARERYKIYRSVGFQLTTATPPTH >gi|316917754|gb|ADCU01000021.1| GENE 202 211853 - 214708 3132 951 aa, chain + ## HITS:1 COG:YPO3443 KEGG:ns NR:ns ## COG: YPO3443 COG0525 # Protein_GI_number: 16123591 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Yersinia pestis # 1 951 15 965 965 1760 88.0 0 MEKTYNPQDIEQPLYEHWEQQGYFKPNGDTSKESFCIMIPPPNVTGSLHMGHAFQQTIMD TMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGRDAFIDKIWQWKEE SGGTITRQMRRLGNSVDWERERFTMDDGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLR TAISDLEVENRETKGSMWHLRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDP RYKDLIGKFVVLPLVGRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGRRHALPMINI LTFDGDIRDEAEVLDTNGEETDVYSNEIPEQFRGMERFAARRAVVKACEDAGLLVEIKPH DLTVPYGDRGGVVIEPMLTDQWYVRTAPLAKVAIEAVEQGEIQFVPKQYENMYYSWMRDI QDWCISRQLWWGHRIPAWYDNEGNVFVGRDEDEVRRENNLSADVELKQDDDVLDTWFSSG LWTFSTLGWPEQTEALKTFHPTNVLTSGFDIIFFWIARMIMLTMHFVKDENGKPQVPFKT VYVTGLIRDDEGQKMSKSKGNVIDPLDMIDGISLPELLEKRTGNMMQPQLAEKIAKRTEK QFPEGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEDQD CGLNGGEMVLSLADRWILSEFNQTVKAYREALDNYRFDLAANILYEFTWNQFCDWYLELT KPVMNGGSEAELRGTRHTLVTVLEALLRLAHPVIPYITETIWQRVKGLKGITADTIMLQP FPEFDASQVDEKALADLEWIKQAIIAVRNIRAEMNIAPSKPLELLLRECSADAQRRVQEN LSFIKSLARLESITVLPAGDKGPVSVTKLVDGAELLIPMAGLIDKDAELDRLAKEVAKIE AEIGRIEAKLSNEGFVARAPEAVVAKEREKMNGYADAKAKLIEQQAVIAAL >gi|316917754|gb|ADCU01000021.1| GENE 203 214797 - 215975 1279 392 aa, chain - ## HITS:1 COG:atoB KEGG:ns NR:ns ## COG: atoB COG0183 # Protein_GI_number: 16130161 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 392 1 393 394 483 72.0 1e-136 MENVVIVSATRTAVGSFNGSLSSIPAVSLGEIVIREALNRAGLDVNLVDEVIMGNVLQAG LGQNPARQAALKAGIGHQVPAYSVNKVCGSGLKCVALAAQAIRAGDARAVVAGGMENMTR APYLLESQARWGYRLGDGQVYDVILRDGLMCATEGYHMGITAENVAKEYGISREEQDRIA FSSQQKASLAIANGCFEKEITPVVIKNKKGDQIFSTDEHPRMTSLDKLASLKPAFTSEGT VTAGNASGINDGAAALVVMSESMAKEQGLTPLARIRSYASGGVAPALMGMGPVPATLLAL KNGGLSLSDIDLIEANEAFAAQFGAVGKTLGLNEDKVNVNGGAIALGHPIGASGARILVT LLHALAARDKTLGLATLCIGGGQGIAMVVERI >gi|316917754|gb|ADCU01000021.1| GENE 204 215987 - 217309 985 440 aa, chain - ## HITS:1 COG:atoE KEGG:ns NR:ns ## COG: atoE COG2031 # Protein_GI_number: 16130160 # Func_class: I Lipid transport and metabolism # Function: Short chain fatty acids transporter # Organism: Escherichia coli K12 # 1 440 1 440 440 667 82.0 0 MIGRISRAMSAVVSRYLPDPLIFAMLLTMIMFIIGLSCTPHSAIQMVQMWGDGFWNLLGF GMQMALIIVTGHALASSAPVKRLLRTVASMAKTPVQGVMLVTFFGLVACVINWGFGLIVG AMFAREVARRVPGSDYPLLIACAYIGFMTWGGGLSGSMPLLAATPGNPVEHIAGLIPVSH TLLSGANIFITGTLIVLLPFITRMMMPKAGSVVSIDPALLAEEPDFQKTLSADATIAEKM EESRIITLIISALGICYLVMYFWNNGFNLTINIVNLLFMIAGLLLHKTPMAYMRAVTAAA RSTAGILVQFPFYAGIQLMMEHSGLGGMITQWFIEIANKDTFPVMTFFSSALINFAVPSG GGHWVIQGPFVIPAAQALGADLGKATMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMG YCVTVLLLTCPIFIIGLVFF >gi|316917754|gb|ADCU01000021.1| GENE 205 217306 - 217971 665 221 aa, chain - ## HITS:1 COG:HI0773 KEGG:ns NR:ns ## COG: HI0773 COG2057 # Protein_GI_number: 16272714 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Haemophilus influenzae # 1 214 1 216 223 307 73.0 9e-84 MNAKELIARRVALELKDGNVVNLGIGLPTEVVNYLPDGIEITLQSENGFLGLGPVTEACP NLVDAGGKPCGLRAGAAMFDSAFSFALIRGGHVDASILGGLQVDQQGNLANWMVPEKMVP GMGGAMDLVTGARHVIIAMEHCAKDGSAKILPLCTLPLTATNCVDMIVTELAVFAFSEGA LILKEHAPGVSLETIVEKTGARFSVASDFKEMPIQINEGAL >gi|316917754|gb|ADCU01000021.1| GENE 206 217968 - 218633 590 221 aa, chain - ## HITS:1 COG:atoD KEGG:ns NR:ns ## COG: atoD COG1788 # Protein_GI_number: 16130158 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Escherichia coli K12 # 1 218 1 218 220 306 70.0 2e-83 MKNKKISLADVIPYFHDGMTIMFGGFMGVGTPPLLIEALLESGVKDLTIIGNDTAFVDTG VGPLISSGRVKKVIASHIGTNPETGRRMIAGEMLVELVPQGTLIERIRCGGAGLGGFLTP TGVGTVVEEGKQKIVQNGVEYLLELPLRADLALVHAHTADCSGNLTYQLTARNFNPIIAL AADLVIAQADQMVDVGSILPDQVITPGALIDYVVVSPEVCS >gi|316917754|gb|ADCU01000021.1| GENE 207 218902 - 220296 1119 464 aa, chain - ## HITS:1 COG:atoC KEGG:ns NR:ns ## COG: atoC COG2204 # Protein_GI_number: 16130157 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli K12 # 1 464 1 457 461 557 62.0 1e-158 MSQPCRILIVDDEKNVLRMLNTVFSQEGNQVFCADNGQDALAIFEQERPDVVLMDIRMPT MNGLEALQRMREKWLDTPIILMTAYAAVETAVEALRLGAFDYVIKPFELDELKLLINRAL QLRNMKQEINILHRELSDSYHCDKILTNNPKMMELCRTIAKVAQSHANVLVTGESGTGKE LIAKAIHYNSPRSKQPFIKVNCGALPESLLESELFGHEKGAFTGAQMQRQGLFERAHQGT LLLDEIGEMPLNLQVKLLRVLQEQEFERVGGSQTIKIDVRIVAATNRDLSDMIEQGEFRR DLYYRLNVMHLYSLPLRERPEDILLLARYFLQKFSAENNKDIIGFDVSAIRMLENYPWLG NVRELANAVEHAVIMSTGYMIFVDDLPIGFQQEMIQDTAVVENNPKMTELLDKPIKLKES LKQYEKEIIERVLEIYQGNRIDTAKALGISRRALMYKLQEYSIN >gi|316917754|gb|ADCU01000021.1| GENE 208 220293 - 222167 1004 624 aa, chain - ## HITS:1 COG:atoS_3 KEGG:ns NR:ns ## COG: atoS_3 COG0642 # Protein_GI_number: 16130156 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 347 616 1 270 278 290 54.0 8e-78 MRLHRNIIMNWLLRQYFTLGNRLFPATLRARMICLAVFMVFLPILVMSYFVEKNGRTALI EEKQNKLYSIAHLLDDALGDDLTLYATASRQERIAALNKVLADRTEKITRAFPNVGAGYY HRDVDAIITYAPQALYGSKVGVSIAQDHPGRTVMKSGKAEIKSGSQVRGDVLNAMIPIRR KGEVIGYIWANEFSNDIDKQAWAMDASIISVISIGLISSLFLILSFSRRLSRDVDLIKER LSKLPFDLNTKMPPLKGEMEGIADKINHLAYALKEAKTLNELIIESAADGMISVDVNGRI IMCNPAAVNITGYSLVELFDHDYAAIFEKDEYRSPLLDTLKHGVEHVGVEVSYPAKERVL QIKASSSQLRNSDDEIIGALVIFTDLTEQKEMQRHIAQAERLATLGELMAGVAHEVRNPL TAISGFIQYLKQGESDPQRIEYIDIIIHEVRSINKVIQQLLDFARPQSRLFQEVSINQII KETLVLVQTNGVNSRIDFSISLDETLPALEVDASGLKQVFLNLLINAVQSIPAKGEISIE TTRLTMEKIQITIKDTGGGMSDDVQKKIFMPFFTTKSQGTGLGLSIVQRIINDHSGDVII ESKIHQGTKVMIILPLKRNNGNLL >gi|316917754|gb|ADCU01000021.1| GENE 209 222655 - 223158 397 167 aa, chain + ## HITS:1 COG:YPO3444 KEGG:ns NR:ns ## COG: YPO3444 COG0454 # Protein_GI_number: 16123592 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Yersinia pestis # 1 167 1 167 167 260 73.0 9e-70 MTTATHIHLLVRPMTPSDNSDIAQVIREVSAECGLTADKGYTVSDPNLDHLFDVYSQPRS AYWVVELDGKVVGGGGIAPLEGADITLCELQKMYFLPVLRGKGLAKQLALQAMDFARENG FTQCYLETTASLTAAIALYEKLGFQHIDEALGSTRHVDCEVRMLRDL >gi|316917754|gb|ADCU01000021.1| GENE 210 223197 - 224594 938 465 aa, chain - ## HITS:1 COG:STM2357 KEGG:ns NR:ns ## COG: STM2357 COG0833 # Protein_GI_number: 16765684 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 453 1 453 468 560 67.0 1e-159 MSRMQEVPPPQEGTTLRRTLKRRHLLMMSLGGTIGTGLFIGIAEPLHTVGPLGTLLAYLI AGSVMMMTMMCLGELSCAFPHSGSFQHYALMFLPHPIWSYAIGWLYWLSWVFSLAADLTA AGLIAHQFMPDIPVYYFCLGILLLLTAVNLLSANVFGECEYWLSAIKVFAIIFFILIGLY LIIQMYNQTPWQPTLKTADGWFPHGVWSIFICMTIVVYSFQGVELVGNAAGETESPQKVL PKVIKGIGVRIILFYVLAISILALVYPYNHPIRGVSPFVWVFERVGLPSAGTLMLIVILS AALSAANSAIYASSRMLWSMAKDGFAPKVFASVNMQGVPAKGILFTAAIALVSLLTKYIS AQTLYLYLIASTGQVGCLAWMVIAWCQYRFRKQVNAGLYPQETIKYRSPFFPWIAWISIV LNAAVILGTWFSPQGMSMLVAEGVLLIIILASYRWRERLECSSLN >gi|316917754|gb|ADCU01000021.1| GENE 211 224641 - 225744 1048 367 aa, chain - ## HITS:1 COG:STM2358 KEGG:ns NR:ns ## COG: STM2358 COG3457 # Protein_GI_number: 16765685 # Func_class: E Amino acid transport and metabolism # Function: Predicted amino acid racemase # Organism: Salmonella typhimurium LT2 # 1 365 1 365 367 641 81.0 0 MYMPTLEIDLKKLTENARVEKEMLAAHGIEVMAVNKVFDGCIETAQAVLDGGINVIAESR TYNLKKIRATGCTTCLLRSPCLSEIEDVVRYADISLNSEPVVMQALSDEAQRQGKIHQVL LMIDMGDLREGIWFAHYEQILATVKLIKELPGLALYGLGTNFNCYGTVLPTVKNGEDFLE IAKRIETDSGVKIEHLSAGNCTSYHLLDKGIWPAGLNHLRIGGLHEFGIEYVDMKYLDAF HHSGKDVGKACSDMYMLHAEIIELNSKPTVPVGELGVDAFLQPKSFTDHGTRKRALLAFG RQDVPAENCVPQDDAISVLGQTSDHTLVDIEDSQQPLKVGDIVSFELDYTGLLMACQTRG VQRRFKY >gi|316917754|gb|ADCU01000021.1| GENE 212 225746 - 227167 1096 473 aa, chain - ## HITS:1 COG:STM2359 KEGG:ns NR:ns ## COG: STM2359 COG0531 # Protein_GI_number: 16765686 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 467 1 467 473 808 90.0 0 MSNSNSSLLGIKDIVFMNVIAILSLRQIPNVAPYGASAMLLWVIAAFCLFFPLAMVCGEL STGWPKDGGIFVWIKEAFGKRIAWIVVVCFLFSCVLFFPLMLQFGFTALGYMFSDSLAES KVFIGVGSMVIFWLLTLLNIRGMQWTKIINSVSAWCGVFIPSSILILLAVVWLCTGHEMQ TDYATAANWIPDLSHWDTIVFLSSMMFAFAGLEVAPMIAGRTRNPQRDFPRAMAVSAVVI VGIYMVGTWALNTLLPAGNTDIVAGVMQAMRSAADTLHMPWLLPVMAICMFFGALGQINS WLVGPIYMLQEASREDNLLGERIGKLHPKYQTPAFALVMQALIVTVLCFSTFVSPSVAAA YWMLTALTTITYFIPYLVMFPAFYRLRITQPDTPRSFKIPGRVLPVLLPALGFISIAFAV CLLFIPPSQIDMGSYFQYAGKIIGGALLAVIVAEVIYHRAQKRNAKLLAGEVK >gi|316917754|gb|ADCU01000021.1| GENE 213 227224 - 228621 1356 465 aa, chain - ## HITS:1 COG:STM2360 KEGG:ns NR:ns ## COG: STM2360 COG0019 # Protein_GI_number: 16765687 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Salmonella typhimurium LT2 # 1 465 1 465 465 862 87.0 0 MSDNIVKNYNQLRQNVIEQDRRFTSHNGKLCFEGVDVEALAKKYGTPFYVFSEPEIVRNI KEIEQAFSAHANTKTFFASKTCSVMGVLKAIKDAGICAEANSLYEVRKCLEIGFSGSQIV FNGVVKKPEDLEYAIDNELYLINVDSLYELDHIDEISRRLKKTANVCVRVEPNVPSATHA ELVTAFHAKSGLDLEQAEETCRRILQMPYVKLRGLHMHVGDQVPESEPFAKATKVLVDES RRLEEVLGIKFDLINVGGGIPVPYKYDEENGDPLKDNMYAGITAQDFADAVIREVHKWRT DVEICIEPGRKVTGSAAVLLTDVSCEKRKTNYDLEGNVECHVEWKFVDAGYSVLSDSQHF DWFFYVYNASRITEPHDQYIKLAGPLCDGGDYFHMGVKGEEFLLPHDTQIGDVVVFLDAG AYTIESQTVYNNRPRTAVVMIDNQGKDRLIRREDTYEDMVKYDIF >gi|316917754|gb|ADCU01000021.1| GENE 214 228815 - 230260 959 481 aa, chain + ## HITS:1 COG:STM2361 KEGG:ns NR:ns ## COG: STM2361 COG3829 # Protein_GI_number: 16765688 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains # Organism: Salmonella typhimurium LT2 # 1 479 1 475 475 681 70.0 0 MPPLDPELQHALEMFSRFFDLIHQPLAIINREGKYVYYNQESADLDGYTVEQALGHHMLD VYPKMKESQSTMLHSLKQGVEYIGHYQVYYNAKGQAVDYQHTTAPLYGSSGEMVGVIEIG RNMSSVRRLQEQVVELNQLLYSNRAENTHDIITENAAMLALIDKGKRLAVNDIPVVIVGE TGTGKELFARLIHRCSKRAKKPFIALNCGALPPTLIESTLFGTVKGAFTGAENSQGYLEL ADGGTLFLDELNAMPIEMQSKLLRFLQDKSFWKLGGNHEIHSNVRIVAAMNESPTQLIKQ NRMRADLFYRLGVGMLALPPLASRPEDILLLSRYFIDKYRDDVEHDIQGISEKACSILLK RSWPGNVRMLENTIVRSMIMQERDGPLENIAYDEECPELFPESSTAREVPAEQLHTLESF ASNGDLVSQVAQFEQHLITRALNHANGNVAEAAKKLGLSRTTLHYKIKKYAIRLGVLSNG A >gi|316917754|gb|ADCU01000021.1| GENE 215 230354 - 231982 1343 542 aa, chain - ## HITS:1 COG:YPO2182 KEGG:ns NR:ns ## COG: YPO2182 COG4166 # Protein_GI_number: 16122412 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Yersinia pestis # 19 542 20 545 545 566 53.0 1e-161 MAANRHKIQRNIWLTLGLMGMCGPALAAIIPAGTELATKQELVRNNGSEPASLDPHKVES DVEFNIISDFFDGLVGIKHDGSIEPRLAERWENKDNRVWTFHLRPDIKWSNGEPITAQDM VFSWRRLVDPKTVSPYGSYLNNMHVANAAEIVAGKQSPDTLGIKALDDKTVQVTLNQPVA YFLSMLAHNSLVPINQKTVEKYGDKWTQPGNFVSSGAYTLSQWVVNEKVVGERNKNYWDD AHTVINRVTYLPIASETADINRYKAGEIDIAYPVPQIQFKALKAQLGEQVHVEPNLATYY YQFNTTKAPFNDPRVRLALNLGLDKDIIAEKVLGQGQRPAWMTSQDTTGGVTFKKPDYAS WTHEQRISEAKKLLKEAGFSEAKPLSFDLLYNTSESHQRIAIAASSMWKKNLGVEAKLQN QEWKTMLDTMHSRAYDLVRYAWIADYDDASTFLNNFRTGDSQNTTGFSNADFDEAMKQAA MAGSLEQRGQFYQKAEDVLAQNVPAIPVYQYVVVKLVKPYVGGYHTNNLGYFYTKDMYIK KH >gi|316917754|gb|ADCU01000021.1| GENE 216 232225 - 232656 712 143 aa, chain - ## HITS:1 COG:YPO3445 KEGG:ns NR:ns ## COG: YPO3445 COG3076 # Protein_GI_number: 16123593 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 143 1 143 143 169 78.0 1e-42 MANPELLEEQREETRLIIEELLDDGSDPDALYTIEHHLSADNFELLEKAAVEAFKLGYEV TDAEELEVEDGTLLMCCDVISEVGLNAEVIDTQVEQLMNLAEKMNVNYDGWGTYFEDPNG EEGDEDDEDDAEGVDEDDNGVRH >gi|316917754|gb|ADCU01000021.1| GENE 217 232833 - 233840 836 335 aa, chain + ## HITS:1 COG:YPO3446 KEGG:ns NR:ns ## COG: YPO3446 COG0078 # Protein_GI_number: 16123594 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Yersinia pestis # 1 335 1 335 335 560 79.0 1e-159 MSQLYQHHFLRLLDFTPADIAYLLTLAAELKQAKKAGNEPQTLKGKNIALIFEKDSTRTR CSFEVAAYDQGANVTYLGSNGSQIGHKESIKDSARVLGRMYDAIQYRGWGQEVVETLAQY AGVPIWNGLTDEFHPTQILADLLTIQEHMPNKPLSQVKLAYLGDARNNMGNSLLEGAALM GMELRLVAPKACWPEAELVAQCQAIADKTGAKLVLTEDLAEGVKDADFLYTDVWVSMGEP KEVWKERIAQLLPYQVNMNVIKLTGNPQVKFLHCLPAFHDDQTAVGKQMAEQYGLHGGME VTDEVFESEHSIVFDEAENRMHTIKAVMVATLGKL >gi|316917754|gb|ADCU01000021.1| GENE 218 233880 - 234356 440 158 aa, chain - ## HITS:1 COG:YPO3447 KEGG:ns NR:ns ## COG: YPO3447 COG2731 # Protein_GI_number: 16123595 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Yersinia pestis # 1 155 1 152 152 195 60.0 4e-50 MITGNVNHLALLPYLPAKLKQAIQYVMENINVDSALGRFDIDGENQFVMVFNDSTSPAEE RRQEYHGRYLDIQIVLAGQEKMTFSNLAAPEGQGEWLEGSDIAFLPLDQQGLEEKSIIMN PGDFVVFYPGELHKPMCSSGDNAPVKKAVVKILVKSLA >gi|316917754|gb|ADCU01000021.1| GENE 219 234498 - 236147 1337 549 aa, chain - ## HITS:1 COG:YPO3696 KEGG:ns NR:ns ## COG: YPO3696 COG0366 # Protein_GI_number: 16123835 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Yersinia pestis # 1 548 1 553 555 815 72.0 0 MSETLPWWQNGVIYQIYPKSFQDSTGTGTGDLNGIISRLDYLEKLGVSALWLTPVYPSPQ IDNGYDVADYCAINPDYGTMADFERLVEQAHQRGMRIVMDMVFNHTSTQHPWFVAAQDPA NEKHHFYIWRDGKADALPNNWRSKFGGDAWQWSESADQYYLHLFAPEQADLNWEHPPVRE ALKSVCHFWADKGVDGLRLDVINLVSKQQDFPDDLQGDGRRFYTDGPRIHEFLGEFGRDV FKPRGLMTVGEMSSTQLEHCQRYAALDGSELSMTFNFHHLKVDYPGGEKWTLARPDFIEL KKIFAYWQQGMHNKAWNALFWCNHDQPRIVSRFGDEGELRVTAAKMLAMVLHGMQGTPYI FQGEEIGMTNPGFTRIEQYRDVESLNMFRELSAQGRESVELLAILATKSRDNSRTPMQWS ADKNAGFTQGTPWIEPAGNFAEINAQAAMADKNSVYYCYQALIELRKQLPLLTHGDYVDL LPDHPSLWCYRRSHQGRALYVLANLSAQSQSLTLEMTLPKEGCMLMGNYPQQDDIPALLQ PYESIYWLM >gi|316917754|gb|ADCU01000021.1| GENE 220 236205 - 237620 1226 471 aa, chain - ## HITS:1 COG:YPO3697_2 KEGG:ns NR:ns ## COG: YPO3697_2 COG1263 # Protein_GI_number: 16123836 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Yersinia pestis # 95 471 2 378 378 617 89.0 1e-176 MSKVKQDQVDRLITLVGGRGNIATVSHCLTRLRFVLNDPALASPKKIEELPMVKGCFTNA GQFQVVIGMDVGDWYQALISTAHVDASDKEQAKKAARQNMSWWEIAISHFAEIFFPLLPA LISGGLILGFRNVIGDIPLVDGQPLTALHPAWKTIYDFLWLLGEAIFFYLPVGVCWSTVK KMGGTPILGIVLGVTLVSPQLMNSYMLGQQLPDVWNFGWFTIEKVGYQAQVIPSMLAGLA LGWIETRLKRLIPDYLYLVVVPVTSLLLAVFLAHTLIGPFGRMIGDGVAWCVKSVMTGSF APIGAALFGFLYAPLVVTGVHQTTLAIDMQMVQSMGGTPVWPIIALSNIAQASAVLAIIF VSRKANEREISVPAAISAYLGVTEPAMYGINLKYRFPMLCAMIGGACAGLICGLFGVMAN GIGVGGLPGILSIQPRFWGIYAVAMVVAVVVPLVLTILVYKRKEKRGELPV >gi|316917754|gb|ADCU01000021.1| GENE 221 237847 - 239031 515 394 aa, chain - ## HITS:1 COG:BMEII1053 KEGG:ns NR:ns ## COG: BMEII1053 COG0738 # Protein_GI_number: 17989398 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Brucella melitensis # 5 380 25 406 412 185 32.0 1e-46 MEKNLATLGSTFFLWGLITAINSTLVLFFYHYFNLSWPQAMLINVLFYVAPFVTCLPCSS LIASLGYRYVLRASLSLVMGGCLLLSYALSQYFLSLSMCAVFVIATGVAALQVVANPYLT LLSKEHKRVGNLSLASAVNSLGTTLAPLCIAFALQYSPIDYVSHKEPIRWIWLGLAIFSG MLIMITFLIKIPDVMQPKSIERKFVQLWQNKSFVFSACAIFTYVGVEVTLGTNTISYLTS IGQWDAEVAISLISFYWGGALIGRFLFGFLAHKVSLRKAFFTVTITSALLVFLAIVLNNT IGGYLLLLIGFANSIMYPIIFSHSMKTVPQLANLAAGILIMAGIGGAVVPYLQAMLVEII ALRFSFLLPFALYLLLACWGAKYLDSQSPSATGG >gi|316917754|gb|ADCU01000021.1| GENE 222 239170 - 239880 404 236 aa, chain + ## HITS:1 COG:CAC3424 KEGG:ns NR:ns ## COG: CAC3424 COG1737 # Protein_GI_number: 15896665 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 10 215 5 213 235 63 26.0 3e-10 MDIKNIFRDTVLNNTEIGVLQYIQANPEKCIQEGIRSVAERCYSNPSTLVRLAKKLKFNG WLEMVYFIKFNITLPKLDVTNDVNFMNIRPQEKLESLLQKLAKERVLIHGSGFSQLIAQY IYNKFLVTGVNASLALWPDYEILEQKNANKFDSVWIISKSGRSSSALSWVKALEQKNIDL VCFTGDHESPLAQAADISFIIHDPQKYDDDIYWSNPFFGYCILGFEHLLKLWFNQR >gi|316917754|gb|ADCU01000021.1| GENE 223 239913 - 241292 1088 459 aa, chain - ## HITS:1 COG:SMb21463 KEGG:ns NR:ns ## COG: SMb21463 COG1486 # Protein_GI_number: 16265037 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Sinorhizobium meliloti # 1 450 1 450 461 295 39.0 1e-79 MKLTVLGGGGVRSAFLAKSLAYNAHRIGLEKVVFLDSSEDNLSIFGEIARYIFETIRPDI EFSLTTDPVSALQGANYVITTLRVGGDESRIRDERIALDHNTLGQETTGAGGFAMAMRSI PAILDYCRLIEEHAASDAILFNFTNPSGLVTEAIIKSGFKRRVYGICDAPSELIRELPAI LDCEESELQVECYGLNHFSWFTHFTVRGEDVTDRLISSPDLYSKTAMQYFSPELVRLCDK QLLNEYLYYYYYKEEALQAIKDSGETRGEQIARINHEMRQDLRRIDVKTNPAEAFDIWMR HYLRRENSYMQNESQQEKFHTREPLTLQQFIEEPDSGGYAGVALDILEAVNSNTTKRIVV SISNNDTLDFLQPDDVIEISCDLSKEGLKPVKPIHVPTAQKNMISCVKEYERLAVEAILN QDRTLAVRALMAHPLVGSWSLAEKLVAAYLQGPQFQNWK >gi|316917754|gb|ADCU01000021.1| GENE 224 241306 - 242877 1004 523 aa, chain - ## HITS:1 COG:CAC3425_1 KEGG:ns NR:ns ## COG: CAC3425_1 COG1263 # Protein_GI_number: 15896666 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Clostridium acetobutylicum # 4 421 1 415 440 319 39.0 7e-87 MSGIRQRTLESMQQFSRAMIGAVLFLPVIGLILAFSSILTNPTLISETSFLHQLGQLLGD TFWPLFGNLGLLFCVGISYGLAKDKKTEVALVSVMCFIMFLGANHSWLEHTNAIADKING EYYGTGQTQLLGFVVVDMGIFLGIILGCTIAWVHNKVSSIELPGALSMYGGAKLTLIAMT PVVIVYAIAFTWFWPIMTHGITAMTGFMKNAGVAGVFVYGFFEKFLIPTGLHHFVWSPFQ LTQIGGSLTVDGQTVSGTQAIFLAYMRHPDLTPVMNDALRFSQQGMTTIFGLSGAALAFY HTAKPEKKMLAKAVLLPAIITSILTGITEPIEFTFLFISPLLWFIHATLTAASQAICDLL SVRPWGASGLIEFLAYNLPLPVSLTRWPLYVLIGIGQFIAYYVIFRTIVVKLKLKTPGRE DDDEVKLYNKKDYQEKIQQGKSGKETQIGEIIKGLGGKQNIISIDNCFTRLRVAIHDLNL VDDAVLKTTGANGVVRNRNEVQVIYGVKVGQVRSKVDTWLADN >gi|316917754|gb|ADCU01000021.1| GENE 225 243471 - 244670 1024 399 aa, chain - ## HITS:1 COG:YPO3824 KEGG:ns NR:ns ## COG: YPO3824 COG0247 # Protein_GI_number: 16123959 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Yersinia pestis # 3 399 7 415 415 721 83.0 0 MSLHADNSFENCIKCTVCTTYCPVAKVNPNYPGPKQAGPDGERLRLKDPLLYDDALKYCT NCKRCEVACPSDVKIGDIIQRAKANYSQHKPTLRDAILSHTDLMGTLSTPFAPIVNMTTG LKPVRKLLDKALKIDHRRELPKYSLGTFRHWYKKQAAEQAKFADQVAFFHGCFVNYNHPQ LGKDLVSVFNAMGIGVQLLKREKCCGVPLIANGFIEQAKKQARVNAESLTDAVIGKGIPV VATSSTCAFTIRDEYPHVLDVDTTQVREHVELATRYLYRLLDGGRELKLKSTPMKIAYHT PCHMEKMGWTPYTLALLQMIPGVELTVLDSQCCGIAGTYGFKKENYETSQGIGAGLFRQI EESGVDLVVTDCETCKWQIEMSTSKKCEHPISLLARAIA >gi|316917754|gb|ADCU01000021.1| GENE 226 244667 - 245938 1237 423 aa, chain - ## HITS:1 COG:YPO3825 KEGG:ns NR:ns ## COG: YPO3825 COG3075 # Protein_GI_number: 16123960 # Func_class: E Amino acid transport and metabolism # Function: Anaerobic glycerol-3-phosphate dehydrogenase # Organism: Yersinia pestis # 1 418 1 419 424 460 60.0 1e-129 MKFDTVMIGGGLAGLLCGIRLAEAGQKCAIVSSGQSALHFSSGSLDLLCQLPDGSPVEQP FAALEALFSQAPQHPYSLMGHDAVVRYAAESERLLERSGLALVGSCQQNHLRVTPLGTRR TTWLSPNEVPVSALEESLPWKRVLVAGIEGFLDFQPHLVANSLAEQGIETKIAELTLPAL DRLRNNPSEFRAVNIARVLDLPDNQQLLIEELNRLAQQVDAIIMPACVGMEQADALEHLR SRVKTPLLLLPTLPPSVLGMRLHHLLRRRFQALGGVIMPGDAALRADLDEGKEVRIYTRN HTDIPLRAHNVVLASGSFFSNGLKADFNGVTEPVFGLDVISESARANWSQENMFAPQPYL QFGVKTDSQLRPTIDGQPVNNLRVIGAVLGGYDPIQQGCGAGVSMLTALHAAELILAKAE GAL >gi|316917754|gb|ADCU01000021.1| GENE 227 245928 - 247583 1359 551 aa, chain - ## HITS:1 COG:YPO3826 KEGG:ns NR:ns ## COG: YPO3826 COG0578 # Protein_GI_number: 16123961 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Yersinia pestis # 1 551 1 551 551 904 83.0 0 MLQSPATQETDVIIIGGGATGAGIARDCARRGLRCILLERHDIATGATGRNHGLLHSGAR YAVTDGESARECIEENKILKRIARHCVERSDGLFITLPEDDLGFQSGFIEACQKAGIDAQ AIDPKEALRLEPAANPALIGAVRVPDGTVDPFRLTAANMLDAREHGAQVLTYHEVSGLLR HADRITGVRVIDHKSRESYEIHAQIVVNAAGIWGQHIAEYADLRVRMFPAKGALLILGHR INNMVINRCRKPADADILVPGDTISLIGTTSTHIDYDQIDNMIVTPEEVDILIREGEKLS PKLARTRILRAYAGVRPLVASDDDPSGRNVSRGIVLLDHAVRDGLEGFITITGGKLMTYR LMAEWATDKVCEKLGITAACTTATEALPGSQHSAEETLRKVISLPATIRGSAVYRHGDRA DRMLAGDRLSNSLVCECEAVTAGEVRYAVDSLTVNNLVDLRRRTRVGMGTCQGELCACRA AGLLNRFKVTTPKQSIDQLSHFLNERWKGVRPIAWGDALRESEFTAWVYQGLCGMEAPTV NQSVQENDNEI >gi|316917754|gb|ADCU01000021.1| GENE 228 248031 - 249386 1355 451 aa, chain + ## HITS:1 COG:STM2283 KEGG:ns NR:ns ## COG: STM2283 COG2271 # Protein_GI_number: 16765610 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Salmonella typhimurium LT2 # 1 449 1 449 452 828 93.0 0 MLSIFKPAAHVKRLPDAQVDPTYRRLRWQIFMGIFFGYAAYYLVRKNFTLAMPYLIEQGF SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSI AVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGSIVSVWNCAHNVGGGLPPLLFLLGM AWFNDWHAALYMPAIAAILVALIAFGLMRDTPQSCGLPPIEEYKNDYPDDYSEKAEEELT AKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEY AGIPGTLLCGWMSDKVFRGNRGATGVFFMVLVTIATIVYWMNPAGNPGVDMACMIIIGFL IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVM IGGSILAVILLLIVMINEKKHHEQIAANRGN >gi|316917754|gb|ADCU01000021.1| GENE 229 249531 - 250607 1191 358 aa, chain + ## HITS:1 COG:STM2282 KEGG:ns NR:ns ## COG: STM2282 COG0584 # Protein_GI_number: 16765609 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Salmonella typhimurium LT2 # 1 353 1 354 356 593 81.0 1e-169 MNLRFNTIMAGLLLSGTLAMSAQAADKVVIAHRGASGYLPEHSLPSKAMAYAQGADYLEQ DLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIK DGKRVQSYPGRFPMGKSDFRIHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHQQEGKD ISTKVLQVLKQYGYTGKNDNVYLQCFDPNELKRIKNELEPKMGMDLKLVQLIAYTDWNET YEKKPDGTWVNYDYDWMFKPGAMKQIAQYADGIGPDYHMLVGKDATKENPKLTAMVTDAH AVKMVVHPYTIRVDALPDYVSNGDQLYDLIYNKAGVDGVFTDFPDKGVQFLEKQGQHK >gi|316917754|gb|ADCU01000021.1| GENE 230 251005 - 251283 396 92 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNKYLLAIAGASLLSFSAFSSAADEIKHSDMEKYTKIGDVSAEVRDGTMDDIVKKLEKKA EEKDADAYRITSVGTEGMGDIARGTAEIYKKK >gi|316917754|gb|ADCU01000021.1| GENE 231 251487 - 252098 509 203 aa, chain + ## HITS:1 COG:STM3684 KEGG:ns NR:ns ## COG: STM3684 COG0625 # Protein_GI_number: 16766969 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Salmonella typhimurium LT2 # 1 201 1 200 202 255 61.0 4e-68 MKLIGSYTSPYVRKIFILLLEKGLTFEFVNDIPWESTTHVPQYNPLGKIPALVTADGEIF YDSPIIAEYVDLLDASPKFLPEDRQQALRIRQLEALSDGICDAAVLLVQEMMRPANKQNS DWIIRQRSKIDRGLDALEKHAKDGKWLNGPQMTLADVATGCCLGYLNFRRVAPNWCVNRP ELVKLAERLFKRESFTRTEPPVS >gi|316917754|gb|ADCU01000021.1| GENE 232 252201 - 253604 1163 467 aa, chain + ## HITS:1 COG:YPO4054 KEGG:ns NR:ns ## COG: YPO4054 COG1921 # Protein_GI_number: 16124170 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Yersinia pestis # 1 461 1 460 462 595 67.0 1e-170 MSADSQTLYSQIPSVDTLLRDDTFQPLLKTYGTQLVTKTLRELQQQARDRIRAEQQLPAW CDNWELAVAHQLSASQKNALQQVFNLTGTVLHTNLGRALLAEQAIDATALAMRHSVTLEY DLDGAGRGHRDRAIANRLCELTGAEDACIVNNNAAAVLLMLAALANNKQVIVSRGELVEI GGAFRIPDVMRQAGCELAEVGTTNRTHLKDYRQAINENTALLMKVHTSNYAIQGFTSAVN EAELVALGRETGIPVITDLGSGSLINMACYGLPAEPMPQALIADGVDLVSFSGDKLLGGP QAGIIVGKRKLIEQLQNHPLKRALRCGKMTLAALDATLQLYQQPEKLAQSLPTLRHMTRP ESAIRACAERLLPPLQRHFAEQFNVAITPCQSQIGSGSLPIDRLPSVAITFMPHSGKGGE LDALSQQWRALPCPVIGRIGEGKLWLDLRCLEDEEGLLLALLQELRP >gi|316917754|gb|ADCU01000021.1| GENE 233 253601 - 255469 1650 622 aa, chain + ## HITS:1 COG:ECs4467 KEGG:ns NR:ns ## COG: ECs4467 COG3276 # Protein_GI_number: 15833721 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Selenocysteine-specific translation elongation factor # Organism: Escherichia coli O157:H7 # 1 622 1 614 614 769 62.0 0 MIIATAGHVDHGKTTLLQALTGVDADRLPEEKRRGMTIDLGYAYLPLENGTVLGFIDVPG HEKFLANMLAGIGGIPHALLVVACDDGVMAQTREHLTLLRLAGKPALTVALTKADRVDSE RINEVHEQVTELLNQMGWRDAPIFVTAASQGDGIEALRTHLITLTEAPAHLDKRFRLAID RAFSVKGAGLVVTGTALAGHVSVGDSLWLTGCDRPVRVRGIHAQNQPSENAHAGQRIALN LSGEVNKDQINRGDWLLAQRPSEAASTRILVALDPIAPIQHWQPLHLHHAASHITGRISL LEEQSPESVVQLAELVLDSPLWLVENDTLIVRDISARTTLGAARVLQISSPRRGKRLPVF LNWLQQLANAKSDAEVLALRLPKGTLSIPNFAWERQLTTEHCSELFHSDDLLVVGDYALS NELANQFQQRLLDTLALFHEQHNDQMGVGRARLRRMALPVEPESLVFTLINQLLANKLIV NSRGWLHLPQHGLTMTPAQQALWENVEPLMQDAPWWVRDLANELKVDENEMRQLLRQAAL QGYITAVVKDRYYRTERMHQFADLIRAMDATQGSTSAADFRDRLGVGRKLAIQILEFFDR SGFTRRRGNDHLLRDSALFSDE >gi|316917754|gb|ADCU01000021.1| GENE 234 255655 - 257190 1338 511 aa, chain + ## HITS:1 COG:STM3680 KEGG:ns NR:ns ## COG: STM3680 COG1012 # Protein_GI_number: 16766965 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 511 1 512 512 912 83.0 0 MTNHALDTLTPGSGQSPLKLKSHYDNFIGGKWVAPVEGEYFTNLTPVTGQALCEVASSSK KDVDLALDAAHAAKDAWGKTSVQQRASVLFKIADRMEQNLELLAHAETWDNGKPIRETLN ADVPLAIDHFRYFASCIRAQEGGISEIDSDTVAYHFHEPLGVVGQIIPWNFPLLMACWKM APALAAGNCIVLKPAKLTPMSVLIMMELIGDLLPEGVLNVVNGAGGEIGEYLATSPRIAK VAFTGSTEVGQQIMGYAAKNVIPVTLELGGKSPNIFFADVMDKEDSFFDKALEGFAMFAF NQGEVCTCPSRALVQESIYERFMERAIKRVESIRSGNPLDTNTQMGAQVSSGQMDTILKY IELGKKEGARVLTGGGKRALEGGLGSGYYLEPTILFGKNSMRVFQEEIFGPVLAVTTFKN QAEALELANDTDYGLGAGVWTRNGTVAYQMGRGIQAGRVWTNCYHAYPAHAAFGGYKQSG IGRETHKMMLEHYQQTKCLLVSYGDKPQGFF >gi|316917754|gb|ADCU01000021.1| GENE 235 257344 - 258537 891 397 aa, chain + ## HITS:1 COG:YPO2675 KEGG:ns NR:ns ## COG: YPO2675 COG1226 # Protein_GI_number: 16122880 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Yersinia pestis # 18 387 17 386 391 395 53.0 1e-110 MKKLFHKFIALFKPHWCLAVLVAVYGYFFMRPVMLRAFDYVPSAISTFSSWKDTLSVVGL LEIPQFVLGFGLILMAFGLLLRARVAWAFSLLLLLVTGTLSFLAPQGSLGLFFYAVILSL LLIVYWRRFDHASLAAGGLFALVSFASLLLYAVFGSLYLGGEFAPPILDMPTAFYFSVVS MSTVGFGDIVPHTATARLFTVSVIVMGITVFATSISAIIGPVIGGNLKRLVKGRISHVMR KNHFIIAGATPLALSVYLGLKQRGDALTVIVPPNVSHEYPPDTDLIIGDPSSAKVLIEAG AAKAKFILALRDDDAENAFIVLAAKEVANANTKTISVVNASKHLQKIKRVQPDMVFSLQL LGSELLVRTLSGEPIDDKLITELFFGNTSSVKDVEKG >gi|316917754|gb|ADCU01000021.1| GENE 236 258603 - 258989 547 128 aa, chain - ## HITS:1 COG:ECs5220 KEGG:ns NR:ns ## COG: ECs5220 COG0251 # Protein_GI_number: 15834474 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli O157:H7 # 1 128 14 141 141 209 89.0 1e-54 MSRIISTENAPAAIGPYVQGVDLGSMIITSGQIPVNPKNGQVAEDVSAQARQSLENVQAI VEAAGLKVSDIVKTTVFVKDLNDFATVNATYEAFFSEHNAPFPARSCVEVARLPKDVKIE IEAIAVRR >gi|316917754|gb|ADCU01000021.1| GENE 237 259185 - 259649 511 154 aa, chain - ## HITS:1 COG:ECs5221 KEGG:ns NR:ns ## COG: ECs5221 COG1781 # Protein_GI_number: 15834475 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 244 79.0 3e-65 MTHDNKLQVEAIKRGTVIDHIPAQVGFKLLTLFKLTETDQRITIGLNLPSNAQGRKDLIK IENVFLTEEQVNQLSLYAPKATVNRIDNYEVVLKLTPTLPEQIDHVLDCPNSNCISRSEP VSSSFKVRVRQDEVLLKCKYCEKEFEHHAVMQNA >gi|316917754|gb|ADCU01000021.1| GENE 238 259665 - 260600 843 311 aa, chain - ## HITS:1 COG:YPO3588 KEGG:ns NR:ns ## COG: YPO3588 COG0540 # Protein_GI_number: 16123730 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Yersinia pestis # 1 309 1 309 311 547 88.0 1e-155 MANPLYNKDIISINDLNRDELELVLRTAASLKAHPQPELLKHKVIASLFFEASTRTRLSF ETSMHRLGASVVGFSDSSNTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFC GSIPVVNAGDGSNQHPTQTLLDLFTIQETQGRLNNINIAMVGDLKYGRTVHSLTQALAKF EGNRFYFIAPDALAMPAYILKMLDEKEIQYSLHTSIEEVIPELDILYMTRVQKERLDPSE YVNVKSQFVLRASSLEGARDNMKVLHPLPRIDEITNDVDSTPYAYYFQQAGNGIFARQAL LALVLNAELNF >gi|316917754|gb|ADCU01000021.1| GENE 239 260947 - 262908 1653 653 aa, chain - ## HITS:1 COG:YPO3686 KEGG:ns NR:ns ## COG: YPO3686 COG1289 # Protein_GI_number: 16123827 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 7 652 6 651 651 941 71.0 0 MNNGGMFLRLRFACKLAFAIVLALFLGFHLNLETPRWSVLTAAIVAAGPAFAAGGEPFSG AIRHRGWLRIIGTFIGSIGGLLIMMLFIRAPLVMMLLCCAWAGVCTWISSLVRIENSYAF GLAGYTALIIVVTTATEPLLSPLYAVERCSEIVLGIVCAVLADIIFSPRSIKSDIDRVVS SLIVDQFRLLQMCVRPDEREVIDKSWNDLVKGTNALNGMRGNLMLESTRWVRVNRRLKAL NTVSLTLITQACETFFISTNAPERIPSEMQVLILEPVETIGDVHKRMKQLRQLLSMQPTG SVPLTISSWIGAATRYLLLAKGVHTNSSISSVEENILEGEYVVKPASAERHHAMINGLRT WAATSIGALFWLWTGWTSGSGCMVMIAVVTALAMRTPNPRMASIDFLLGTMMALPIGALF YMLILPATQQSMLLLCISLGLMAFVIGLEVQKRRLGSLGTLASTINIMVLSNPMTFPVSS FLDNAIGQVIGCFVAMVVLFLIRDRSKARTGRALLNGFVYSAVSALTTNQARRNENHLPA LYQQLFQLLNMFPNDIAKYRLALTLIIAHQRLRNAPIPVNQELSDFHKQIRATANKVISA GSDTKRRGYFFRLLEELNEYQQRLVHYQAPYTVTIPVKRLADMLDKYQHALID >gi|316917754|gb|ADCU01000021.1| GENE 240 263000 - 263923 874 307 aa, chain - ## HITS:1 COG:YPO3685 KEGG:ns NR:ns ## COG: YPO3685 COG1566 # Protein_GI_number: 16123826 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Yersinia pestis # 2 307 6 311 311 434 74.0 1e-121 MIRMTRIAITVVIVILAAIAVFKAWAFYTESPWTRDAKFTADVVAIAPDVSGLLSDVPIH DNQLVKKDQILFVIDRPRYQEALNQAEADVRYYQTLVAEKAKEAGRRVRLGVQAMSQEEI DQSSNVLATVRQQLAKAQSTRDLAKLDLERTVVRAPADGWVTNLNVHQGEFINRGATAVA LVKKGTFYILAYMEETKLDGIKRGDRVEITPLGSNRILYGTVDSISAGVNNKSSTADSKG LATVDSNLEWVRLAQRVPVKILLDGNEQESPYPAGTTATVVVSNQQDVERKSSSPIVQLL HRLREFG >gi|316917754|gb|ADCU01000021.1| GENE 241 263943 - 264146 200 67 aa, chain - ## HITS:1 COG:no KEGG:ROD_45731 NR:ns ## KEGG: ROD_45731 # Name: aaeX # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 67 13 79 79 77 80.0 2e-13 MGLLPVMVVFGLSFPPVFFELLVALLLFLLFRRVLQPTGIYDFVWHPALFNTALYCCLFY LITCLFV >gi|316917754|gb|ADCU01000021.1| GENE 242 264560 - 265480 679 306 aa, chain + ## HITS:1 COG:YPO3683 KEGG:ns NR:ns ## COG: YPO3683 COG0583 # Protein_GI_number: 16123824 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 303 1 303 303 515 80.0 1e-146 MERLKRMAVFAKVVECGSFTSAGRQLEMSVSSISQTISKLENELNIKLLNRSTRSIGLTE AGKIYYQGCRKMLLEAQEVHEQIYAFNNTPTGTLRIGSSSTMAQNVIAPMTARMLREYPG LSIDLVTGVPAPDLIADGLDLVVRVGALQDSSLFSKRLGSMPMVVCAAKSYLQQQGTPEK PSDIASFSWLTYSVRPDSEFELIAPEGQTLRLSPQGRFVTNDSQTLIRWLCAGVGIAYVP LMWIIDEIKRGEVEILFSRYQSDPRPVYALYTQKDKLPLKVQVCINYLTEYFAKVGEIYQ DYRQGA >gi|316917754|gb|ADCU01000021.1| GENE 243 266165 - 267610 1487 481 aa, chain - ## HITS:1 COG:YPO3672 KEGG:ns NR:ns ## COG: YPO3672 COG0312 # Protein_GI_number: 16123815 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Yersinia pestis # 1 481 1 481 481 801 87.0 0 MSLTFVSEQLLAANKLSHQDLFSVLGTLAERQLDYADLYFQSSYHESWVIEDRIIKDGSY NIDQGVGVRAISGEKTGFAYADQITLNALNQSAQAARSIVREQGNGKVHTLGNIPHSLLY PAIDPLQSLPREEKIALLHRVDNVARAEDPRVQEVSASITGVYELILVAATDGTLAADVR PLVRLSVSVLVEEDGRRERGSSGGGGRSGYEYFLEMVDGDVRADAFAKEAVRMALVNLSA VAAPAGSMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDDG TISGRRGSLAIDDEGVPGQYNVLIENGILKGFMQDKMNARLMGLAPTGNGRRESYAHLPM PRMTNTYMLAGKSTPQDIISSVEYGLYAPNFAGGQVDITSGKFVFSTSEAYLIENGKITK PVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDSMTVGGT A >gi|316917754|gb|ADCU01000021.1| GENE 244 267618 - 268466 811 282 aa, chain - ## HITS:1 COG:YPO3671 KEGG:ns NR:ns ## COG: YPO3671 COG0388 # Protein_GI_number: 16123814 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Yersinia pestis # 1 280 1 280 289 437 75.0 1e-123 MRNANIALLQLCSGDNIRSNLAQIEQQLKQLNSNIKLVMTPENALLFADSKAYHQQAEQE GTGPLQDAIRDMARRYGVWILVGSMPLVSREDSKQITASSLLFDDQGELKARYDKLHMFD VDIKDTHGHYRESDTYQHGQHLTVVDTPVGKLGMTICYDLRFPGLFQALRDKGAEIISVP AAFTRVTGESHWEILLRARAIETQCYILAPAQVGRHGATRRTWGHTMAVDGWGNVIEQNA DLVMPIKVKVNTHSLENIRTQMPVAQHNRFQPKLVNPLDKQE >gi|316917754|gb|ADCU01000021.1| GENE 245 268471 - 272274 2480 1267 aa, chain - ## HITS:1 COG:YPO3670 KEGG:ns NR:ns ## COG: YPO3670 COG3164 # Protein_GI_number: 16123813 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 1266 1 1303 1307 1469 55.0 0 MRRLSGYLLATLVTLTVLVALIVSGLRLALPHLERFRPQIVEKIEQYSGVPMKIGSLDAS WQSFGPTLDVRDISLAQPKGNIRIQRVTVALDVWQSLLHWRWQFRDLTFYHLNANSNEPF SRSSSGSDGFESDTLTNIFLYQFDHFILRDSKVTFPSPSGTRIQLNIPNLTWLNTATRHR AEGQVMFSTQEGQHGNLQVRMDLHDKNGLLSDGQVYLQADEIEMKPWLSRWVNRNTGLHS AKFSLASWLTVTDGEIQGGHLVLKQGEANWSTADKQHDLTVDNLNLQVGRVAGGWTFDIP QLNLATDGVAWPKGSLSAMYRPENTRFIGPDQPEELRLRATDLQLERIGPILPTLAFLTP DAIGRWDDIRPKGHISYAGVDIPLQQPERSRFIGAWQDVSWQAWKLLPGVNHFNGSVSGS TMNAGLHFSLKDSVLPYGDMFRAPLEVSHASGYTSFINNDKGWSLSGDNLDIQAKSLWAT GEFKYQSPKEGQPWLSILSGIRLYDAAQAWRYFPEPLMGTHLVDYLTGALEGGKVDNATL VYAGNPHYFPYQHNEGQFQVFVPLRDATFRFQPEWAPLSNLAIDLNFLNDGLWMDAPHTK LGDVDGTDITAVIPVYHKEKLLVDAKVSGSGKAVHEYFKTSPLADSVGAALDELEVGGNV SGRLHLDIPLDGKATRASGDVTFKNNALLIKPLDSSFTQLNGSLHFDNGNLTSSPMNASW FGQPVNFTFSTAEGEQDFGVDVALNADWQPAKLPWMPTALAKDVSGSAPWNTKVAIKLPH KGHPSYDVQVNADLKNVSSHLPSPLDKARGEALPLVVNAKGDLNGFMLSGSLGPKNHFNS QLILQKHGVKLARAAWSDNSRKVPALPESESLTLNLPALDGEEWLAALAPALSDKSKTSG SSFSYPQVVNLSTPQLILAGQTWHQLTVSASKLANGTHISAKGREINGVADLDNNNVLRA NLAYLYYNPEWSTATSAPSEAPQVPSTVKKISFSQWPSMILRCQDCWMMGQRLRQVNADL TPRGDQLVLSNGLINTGNTQLTLTGTWNQSGDKDHTTLKGRLKGANVTNSSDYFGFASPL KNSPFDIHFDVNWMGEPWSPQVNSLNGTLSSKLGKGEIDNAGGGRAGQLLRLVSFDALLR KLKLDFSDTFGQGFYYDSIRGNGKFKNGILSTNDLLVDGLAADIAMDGSVNFVTRRIDMQ AVVAPEISATVGVATAFVINPVVGAAVFAASKVLAPLWNKISLIRYNITGSLDHPTINEV LRQPKEK >gi|316917754|gb|ADCU01000021.1| GENE 246 272317 - 273786 1385 489 aa, chain - ## HITS:1 COG:YPO3669 KEGG:ns NR:ns ## COG: YPO3669 COG1530 # Protein_GI_number: 16123812 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Yersinia pestis # 1 489 1 489 489 858 91.0 0 MTAELLVNVTPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDI GLDKAAFLHASDIMPHTECVAGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLT TDITLPSRYLVFMPGASHVGVSQRIEGEAERNRLKSIVSEYCDEQGGFIIRTAAEGIDDE ELAQDAAFLKRLWTKVMERKRRNKTKCKLYGELALAHRVLRDFAGAALDRIRVDSRLNFD SLTEFTREYIPEMTSKLELYAGKQPIFDLYDVENEIQRSLDRRVELKSGGYLIIDQTEAM TTVDINTGAFVGHRNLDETIFNTNVEATQAIARQLRLRNLGGIIIIDFIDMSSEDHRRRV LHSLEQALSKDRAKTSINGFSQLGLVEMTRKRTRESIEHVLCSDCPTCRGRGTVKTVETV CYEILREIVRVHHAYDSDRFLVYASPAVGEALKSEESHSLAEVEIFVGKQVKVQIEPLYN QEQFDVVMM >gi|316917754|gb|ADCU01000021.1| GENE 247 273776 - 274369 528 197 aa, chain - ## HITS:1 COG:YPO3668 KEGG:ns NR:ns ## COG: YPO3668 COG0424 # Protein_GI_number: 16123811 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Yersinia pestis # 1 197 1 197 197 269 72.0 2e-72 MDSIYLGSGSPRRRELLALMDIPFERLIIDVEEQRQPEEAPLEYVCRLAQDKARAGVEAA PEDKPVLGADTIVVLDRQVLEKPRDREHAAQMLRQLSGRTHQVITAVSLADRQHQLYCHV ITDVTFRALSEQDIHDYIASGEPMDKAGAYGIQGKGGCFVRSIAGSYHAVMGLPLVETQE LLEQFMALRDVRRDHDS >gi|316917754|gb|ADCU01000021.1| GENE 248 274416 - 274904 465 162 aa, chain - ## HITS:1 COG:YPO3667 KEGG:ns NR:ns ## COG: YPO3667 COG2891 # Protein_GI_number: 16123810 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Yersinia pestis # 1 162 1 162 162 207 79.0 8e-54 MSGYRSQGRWVIWLFFLLAFVLQIMPWPDELMMFRPNWLALFLIYWVMALPHRVNVGTGF VLGLIWDLILGSTLGIRALAFSLLAYLVAFKFQLFRNMALWQQALMVVLLTAAMDIVVFW GEFVIANASFRPEVFWSSVVNGVLWPWLFLLMRKVRRRFAVQ >gi|316917754|gb|ADCU01000021.1| GENE 249 274904 - 275980 876 358 aa, chain - ## HITS:1 COG:YPO3666 KEGG:ns NR:ns ## COG: YPO3666 COG1792 # Protein_GI_number: 16123809 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Yersinia pestis # 1 307 1 307 331 479 84.0 1e-135 MKPIFSRGPSLQLRLFLAVVVAIGLVVADSRFGTFLHIRSYLDTAVSPFYYLSNGPRQIL DNVSNTLATREQLELENRALRQELLLKNSDTLLLGQFKQENARLRELLGSPLRQDEHKMV TQVISTLPDPYSDQVVIDKGSNSGVYFGQPIISDKGVVGQVVAVGKMTSRVLLICNASHA LPIQVLRNDIRVLAAGNGCTDDLQLEHLPANTDIRVGDVLVTSGLGGRFPEGYPVAVVSS VKVDNQRAYTVIKARPTAGLQRLRYLLLLWGADRNGTMPLPPDEVHRVANERLMQMMPQV LPTPSEMGPQQPAPAVGITPPGTTAVAPTTPAAPANNSAAPAVSPSATSLPARTQGGR >gi|316917754|gb|ADCU01000021.1| GENE 250 276138 - 277181 1226 347 aa, chain - ## HITS:1 COG:YPO3665 KEGG:ns NR:ns ## COG: YPO3665 COG1077 # Protein_GI_number: 16123808 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Yersinia pestis # 1 347 1 347 347 643 98.0 0 MFKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHEAK QMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQYFIKQVHSNSFMRPSPRVLVCVPVGATQ VERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNG VVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHGIGSAYPGDEVHEIEVRGRN LAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALL RNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE >gi|316917754|gb|ADCU01000021.1| GENE 251 277623 - 279524 1206 633 aa, chain - ## HITS:1 COG:YPO3664_3 KEGG:ns NR:ns ## COG: YPO3664_3 COG2200 # Protein_GI_number: 16123807 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Yersinia pestis # 394 631 1 238 245 311 63.0 2e-84 MRITTKLFAFITVLVALAMLLMLLGSTYSFFNQSHTHAERQLNALATTIDQLLLTEPRDN VKKWLPVVMRSSGVSEIIVHNDAHQVYQLKLPNTYNVWDTLTNQRYVEATLMHHPGYSLK MVYIDPTASYTRSLETMFPVTISICLMIVVLLFSYRWLREQTLGLEKLERRARKILAGER ENAVRGDVHEFPPNASSAIDRLLSDLADAREERGRVDTLIRAFAAQDSRTGLNNRLFFDN QLTTQLEDEGAHGVVMVIRVPDWESLAGLHGKREREEFRYSLVNMLSTSVMRYPSGLLAR YFQNNFAVLLPHRSLKEAEGFAAQLINSISAIPPANGIDIEEVLHIGISLYHYGQSTEQV MDQAEQAARNAALQGSNGWFVDDNPVPEVVRGSVKWRTLLEQTLARGGPTLLHKEAIDVN GDVHHHDILPYIYDGGQALPSAEYYPLVQQLGMAESYDRQMLLQIIPLLRHFSAEKLAFP VSIDSLLQRSFQRWLRDTLLQNEKALRQRIFFELAEADVSQHIDRLRPVVRLLQGLGCHI VISQAGLKVVSTSYIKQLQVTLVKLHPGLVRNIHKRVENQLFVQSLTGACEGTSAQVFAA GVRTKEEWLVLKEKGIAGGQGDFFAKPRPVSRV >gi|316917754|gb|ADCU01000021.1| GENE 252 279820 - 280797 903 325 aa, chain + ## HITS:1 COG:YPO3663 KEGG:ns NR:ns ## COG: YPO3663 COG0604 # Protein_GI_number: 16123806 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Yersinia pestis # 1 325 1 325 325 504 75.0 1e-143 MKALVLEQLDGKTIANIQTLKTDDLPAGDVLVDVQWSSLNYKDALAITGKGKIIRNFPMV PGIDFAGTVHHSEDPRFHVGQSVILTGWGVGENHWGGLSEQARVSSEWLVALPYGLDARK AMIIGTAGFTAMLCVMALEDGGVTPDSGEILVTGASGGVGSTAVALLSRLGYRVVAVSGR ESNEEYLKSLGAERVLPRSDFTADSRPLEKQIWAGAVDTVGDKVLAKVLAQMDYNSTVAA CGLAGGYQLPTTVMPFILRNVRLQGVDSVMTPHERRTEAWLRLADLLPESFYQQAATEVT LENAAETAAALMDNKVTGRTLVKVR >gi|316917754|gb|ADCU01000021.1| GENE 253 280968 - 281969 753 333 aa, chain + ## HITS:1 COG:YPO3662 KEGG:ns NR:ns ## COG: YPO3662 COG2041 # Protein_GI_number: 16123805 # Func_class: R General function prediction only # Function: Sulfite oxidase and related enzymes # Organism: Yersinia pestis # 6 333 39 366 366 552 79.0 1e-157 MAKFPKFTEAEVTPESVFHQRRSVLKALGITAASLALPHAAQADLLSWFKGHDRPAAPAG KPLQFSQPAQYQAKLALTPEDKVTGYNNYYEFGLDKADPAANAGTLKTEGWKIRIDGEVA KPLTLDMDDIYKHFALEERIYRMRCVEAWSMVIPWVGFELGKLLKMAEPTSKARYVAFQT IYDPDNMPGQKDRFIGGGLKYPYIEGLRLDEAMHPLTLLTTGVYGKELPPQNGAPLRLTV PWKYGFKGIKSIVSIRLTHDEPPTTWNTSAPDEYGFYANVNPHVDHPRWSQASERFIGSG GILDVKRQPTLLFNGYAEQVASLYKGMDLRTFF >gi|316917754|gb|ADCU01000021.1| GENE 254 281999 - 282598 513 199 aa, chain + ## HITS:1 COG:STM3378 KEGG:ns NR:ns ## COG: STM3378 COG2717 # Protein_GI_number: 16766673 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 3 199 2 199 199 226 71.0 2e-59 MKRITLKQVQILKVLIWLAASLPLLWLVFAATQGLLSADPAKDIQHFTGRMALKLLLATL LITPLARYGKQPLLIRCRRLLGVWCFVWASIHLASYTILELGLDFSLLGSELIKRPYLTL GIISWLILLALAATSTQWAMRKMGSNWQKLHNFVYIVAILAPIHYLWSVKTLSPLPIFYA IGAVILLAFRYQKIRQWWR >gi|316917754|gb|ADCU01000021.1| GENE 255 282841 - 283293 402 150 aa, chain + ## HITS:1 COG:YPO3660 KEGG:ns NR:ns ## COG: YPO3660 COG0757 # Protein_GI_number: 16123803 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Yersinia pestis # 1 150 1 150 150 218 84.0 3e-57 MADKFNILLLNGPNLNLLGTREPDKYGSTTLPEIVGHLEQAANTLNVSLSHLQSNAEFEL IDRIHAARGNTDFILINPAAFTHTSVAIRDALLAVQIPFIEIHLSNVHAREPFRHHSYLS DIAVGVICGLGADGYEFALQAAVNRLKKFN >gi|316917754|gb|ADCU01000021.1| GENE 256 283386 - 283847 505 153 aa, chain + ## HITS:1 COG:ECs4127 KEGG:ns NR:ns ## COG: ECs4127 COG0511 # Protein_GI_number: 15833381 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Escherichia coli O157:H7 # 1 153 1 156 156 189 82.0 2e-48 MDIRKIKKLIELVEESGISELEISEGEESVRISRAPAAGSMPMMQPYYAAAPAQAAAPVA AAPAAAPAAEAPAAISGHIVRSPMVGTFYRTPSPDAKSFVEVGQKVNAGDPLCIVEAMKM MNQIEADKSGVVKAILVENGQPVEFDEPLVVIE >gi|316917754|gb|ADCU01000021.1| GENE 257 283859 - 285208 1364 449 aa, chain + ## HITS:1 COG:accC KEGG:ns NR:ns ## COG: accC COG0439 # Protein_GI_number: 16131144 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Escherichia coli K12 # 1 449 1 449 449 847 95.0 0 MLDKIVIANRGEIALRILRACKELGIKTVAVHSTADRDLKHVLLADETVCIGPAPSVKSY LNIPAIISAAEITGAVAIHPGYGFLSENADFAEQIERSGFIFIGPRAETIRLMGDKVSAI SAMKKAGVPCVPGSDGPLGDDMVKNKAIAKRIGYPVIIKASGGGGGRGMRVVRGDKDLEQ SIIMTKAEAKAAFSNDMVYMEKYLENPRHIEIQVLADGQGNAIYLAERDCSMQRRHQKVV EEAPAPGITPELRRYIGERCSKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVT EMITGVDLIKEQLRIAAGQPLSIKQHEVQVRGHAVECRINAEDPDTFLPSPGKITRFHAP GGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALAELIIDGIKTNVEL QQKIMNDENFQHGGTNIHYLEKKLGLQEK >gi|316917754|gb|ADCU01000021.1| GENE 258 285366 - 285608 331 80 aa, chain + ## HITS:1 COG:STM3381 KEGG:ns NR:ns ## COG: STM3381 COG3924 # Protein_GI_number: 16766676 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 79 1 79 80 108 70.0 2e-24 MDARFLQANREARWALWLTIAYLVLWIVAAYVPNSLQGITGLPHWFEMACLLLPLAFILL CWAMVRLIFKDIPLGNNDAD >gi|316917754|gb|ADCU01000021.1| GENE 259 285598 - 287055 1185 485 aa, chain + ## HITS:1 COG:YPO3657 KEGG:ns NR:ns ## COG: YPO3657 COG4145 # Protein_GI_number: 16123799 # Func_class: H Coenzyme transport and metabolism # Function: Na+/panthothenate symporter # Organism: Yersinia pestis # 1 473 1 473 484 724 87.0 0 MQTDVILPLVGYLLLVFGLSVYAYRRRQKGNFLNEYFIGDRSMGGFVLAMTLTATYISAS SFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGVLGKKFAILARKYNAVTLNDMLYARYKS RLLVWVASLSLLVAFIGAMTVQFIGGARLLETAAGIPYDTGLLIFGISIALYTSVGGFRA SVLNDAMQGLVMLLGTIILLAGVIHAAGGLHAAVDTLQNIDPKLVSPQGADDILSAPFMA SFWILVCFGVIGLPHTAVRCISYKDSKAVHRAIVIGTIVVGILMFGMHLAGALGRAILPD LKVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSATIVKDLYLGMRPQAL KNEKRLARMSSLSTLILGLLLLLAAWRPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERA NAHGALSSMISGAICYAVLATADWHIFSLHPIVPSLLISLAAFGIGNFFGERGETVPAAT ELNSK >gi|316917754|gb|ADCU01000021.1| GENE 260 287066 - 287947 1415 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227114012|ref|ZP_03827668.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] # 1 293 1 293 295 549 89 1e-155 MPWIQIKINTTGNQAESLSDALMESGAVSVTFQDTHDNPVFEPLPGETLLWGDTDVIGLY DAETDMKEIVAILENDPALGKGFHHKIEQIEDKDWEREWMDNFHPMQFGRRLWICPSWRD VPDPTAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLEGKTVIDFGCGSGILAIAALKLG AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPADLSADVVVANILAGPLRELA PLISDLPKSGGHLGLSGVLATQALSVAEAYEDKFIIDPVAELEEWCRITGIRR >gi|316917754|gb|ADCU01000021.1| GENE 261 287975 - 288454 341 159 aa, chain - ## HITS:1 COG:YPO1693 KEGG:ns NR:ns ## COG: YPO1693 COG4405 # Protein_GI_number: 16121953 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 29 149 16 126 129 97 43.0 1e-20 MDSEIALFWLKIVQQHPELEGRIYHAEHFGTPGDLAQQLSELIVSGEKYATCGALDEYWH EGMTIPTAGYLTIVLDGHEKPVAAIETTQISLRRFRDVDAIFAAAEGEGDKSLAYWRQAH QAFFETSQLAIGKTFSEDMWLVCEHFRVLGVAETTTAPI >gi|316917754|gb|ADCU01000021.1| GENE 262 288765 - 289769 1080 334 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145637283|ref|ZP_01792944.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittHH] # 1 325 1 324 326 420 63 1e-116 MRIGHIELKNRLIAAPMAGITDRPFRTLCYEMGAGMAVSEMLSSNPEVWQTDKSRLRMVH LDEPGIRAVQIAGCDPDDMAAAAKINADSGAQIIDINMGCPAKKVNRKLAGSALLQYPDL VGKILSAVVNAVDVPVTLKIRTGWSPEHRNCVEIAQLAERCGIQALTIHGRTRACLFNGE AEYDSIRTVKQSVSIPIIANGDITDPHKARAVLDYTGADALMIGRAAQGRPWIFREIQHY LDTGELLPPMPLEEVKHLLLGHVQELHNFYGSGKGFRIARKHVSWYLQEHAPCDQFRRTF NAIEDASEQLEALEAYFENLSVKKELTELCSNNA >gi|316917754|gb|ADCU01000021.1| GENE 263 289751 - 290047 392 98 aa, chain + ## HITS:1 COG:ECs4133 KEGG:ns NR:ns ## COG: ECs4133 COG2901 # Protein_GI_number: 15833387 # Func_class: K Transcription; L Replication, recombination and repair # Function: Factor for inversion stimulation Fis, transcriptional activator # Organism: Escherichia coli O157:H7 # 1 98 1 98 98 162 98.0 2e-40 MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKGYFAQLNGQDVNDLYELVLAEVEQ PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN >gi|316917754|gb|ADCU01000021.1| GENE 264 290459 - 291955 1326 498 aa, chain + ## HITS:1 COG:STM1094 KEGG:ns NR:ns ## COG: STM1094 COG4690 # Protein_GI_number: 16764452 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Salmonella typhimurium LT2 # 6 482 2 475 489 456 48.0 1e-128 MFFFKKCVVALSINIALISSGFACTTLLAGNEATTDGSVFVARSADSDALKAQHFVIHPA QKNQTGVYSTKAHNGANDFSYSLPKNSLRYTTVPNWKTQLHGATGFNELGVGVSGTESIF ASPKALAVDPYVEDKGITEDDIPDILLSQAKTAREAVALLGNIIETHGAGEGFGVAVVDE HEVWYLETGSGHQWMAQRVPNDKYFATGNQGRLQQYDAKDPNVMGSKNLIEFATEKGLYN PKTDGEFNFSKAYTRDDERDRTYNDPRVWTIQKIFNPSVNQDVSAGRQFPVLLTPEKKLS LDDVKAVLSNHYDGTKHDPYSNGLNGKEPWRPISVFRTYESHVMQVRPWLPKEIGEVTYV GLGMADLTAFVPYYSGLQAYPQNYAQGTDKADSDSIYWKYRKLQTLVMTDYPKLAPIVKK AYHDWEINVADEQKAMESKYLKMAKTDKAGADKMLNEFNLRVMADAEKLTENLTNEIFTL RTKDIQSDIFFANAAKKD >gi|316917754|gb|ADCU01000021.1| GENE 265 292209 - 292940 625 243 aa, chain + ## HITS:1 COG:mll7079 KEGG:ns NR:ns ## COG: mll7079 COG2186 # Protein_GI_number: 13475898 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 7 223 26 240 268 130 38.0 2e-30 MNKPASSVSESITRDLALRIIRGELAEGMAIPGEHELAQQYEASRTSVRNALQVLGAKGM LLIQAKRRSTVTPREQWSFLDAEVLSWLENVGIESELVEQLMLTRLIFEPDVAAMAALNA NGHDLAAIEDAWHTMQLGQKNNSAEQFERGDLAFHTAVLRACHNPFLASVGNALSAAMLL SFKHTLEDDLQLTQDAVQQHRDLLEAIRLKQADQARQSMRHILLSAAHKHIWREIPEKYQ HFF >gi|316917754|gb|ADCU01000021.1| GENE 266 293062 - 293961 442 299 aa, chain + ## HITS:1 COG:SMa0705 KEGG:ns NR:ns ## COG: SMa0705 COG3734 # Protein_GI_number: 16262825 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-galactonokinase # Organism: Sinorhizobium meliloti # 6 292 22 317 324 159 36.0 5e-39 MNNYWIAIDWGTSNFRAFLMNNNQCIDTINAHCGLLSVPDRQFDTALLPLITPWLMKHPN LPILMAGMVGSQQGWQEVPYVALPASYQCFAQQTAQVTTSWGSPCRIVAGASGANAFGLP DVMRGEEVQLIGLAAQYSQEQHLVILPGTHSKHATIAHDHILHFNTFMTGEIYAVMLNHS LLGRDLPESDEDHHTFALGVQNAQKAPNLSNALFSARTLKLDGSITPAQVASYLSGLLIG SELSALPGKQAWIVGSALLTKRYTRAASLLGITLTPANGDDCFIHGMTTIYQSLTGALA >gi|316917754|gb|ADCU01000021.1| GENE 267 293958 - 294608 429 216 aa, chain + ## HITS:1 COG:BMEII0358 KEGG:ns NR:ns ## COG: BMEII0358 COG0800 # Protein_GI_number: 17988703 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Brucella melitensis # 4 212 1 207 210 166 43.0 4e-41 MNYMNFALRWQQCSLPLVAILRGVTPHEAQGVAETLLECGFTYLEVPLNSPQPLESIAIM AKTIGSKGFVGAGTVLTEHQVHQVAEAGGQLIISPNMEPSVIRAACELGLISMPGIATPS EAFTALRTGASALKLFPAELVTPTIAKAMSVVLPAETVCLPVGGINPDSEQMRSYLNSGA RGFGLGGGLYQSGISLATLRERAMAYRHAWQQANQK >gi|316917754|gb|ADCU01000021.1| GENE 268 294605 - 295480 347 291 aa, chain + ## HITS:1 COG:AGpA685_2 KEGG:ns NR:ns ## COG: AGpA685_2 COG3386 # Protein_GI_number: 16119692 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconolactonase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 17 287 1 277 279 104 32.0 2e-22 MIANALQDLSIIGDYRALLGESPVWCFRSQSLIWVDILQRRLLRYWPQQGEKIEIHELPF LCSAALLTEESEQFLLVTAQGVMLYDYSQQSHRQLCPWPEDEQTRPNEAAIAPDGSLWFS TMDVTARSPIGSWYRYEYGGAQPEKMLSDQHVPNTLAWLGSYVWFVDTFRHRFCRSAAHR ISTQTLSEWPIEDLLADGSALTLDGMLLNACWGSACLTAYRLDAAAPQWLTTHPLPVTQP TSCAFGGPDLHDLYITSASDGLAMPSKTEGALLRYRTPYTGQQATLFNLKK >gi|316917754|gb|ADCU01000021.1| GENE 269 295503 - 296903 1032 466 aa, chain + ## HITS:1 COG:STM3091 KEGG:ns NR:ns ## COG: STM3091 COG0477 # Protein_GI_number: 16766392 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 17 464 15 462 464 576 68.0 1e-164 MTTHSISQSTPHTNRQTLLICFLAALAGLLFGLDMGVIAGALPFLAKEFALSSHQQEMVV SIMMLGAALGALCSGPLCTRIGRKKTLLIGSVLFVVGSIGCALAPDLSTLVISRFLLGAA VGVASFVAPLYLSEIAPEHIRGSMISLYQLMITIGILAAFLSDTALSASGNWRWMLGIIT IPALILFFGVLTLPESPRWLMMKDKHALAEKVLLLLRSTREEAHSELEAIRESVQVRQRG WQLFRANSHFRRSTYLGVLLQFMQQFTGMTVIMYYAPKIFAIAGFASTEQQMWGTVIAGL TNVLATFIAIGLVDRWGRKPILKLGFSVMAICMASMGYMFFVGITSATEQYTAVTLLLIF IVGFAMSAGPLIWVLCSEIQPLAGRDFGVTCSTMANWIANMIIGATFLTLIDTIGSAGTF WLYAGLNVVCIVLTLLFVPETKNISLENIEKNLMTGLPLRSIGSAL >gi|316917754|gb|ADCU01000021.1| GENE 270 296937 - 298283 733 448 aa, chain + ## HITS:1 COG:RSc2352 KEGG:ns NR:ns ## COG: RSc2352 COG0477 # Protein_GI_number: 17547071 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 18 440 26 441 442 408 54.0 1e-113 MTALDITNTSENEKKIAAVYNKITRRLIPFLILCYFFAYLDRVNVGFAKLHMQDALNFSD TVYGVGAGIFFIGYFLFELPSNLLMQRFGPRFWIARIMISWAILSALMIFVQTPTQFYVL RFLLGVAEAGFFPGIVFYLTLWFPSWRSARTLGLFILVTPLSTIIGSPLSGFILKFFDGV DGLHNWQWLFVVEAIPSFLLAFVVLRYLNNDVKSARWLSTEEKQIVADDLETDRLRNLIA NEGKPPQNLKMMFRNGYVWLLALIFFSFNIGYYGINFWLPSIIKSSGVNDDFHIGLLAAL PYVFGAVFMVWNSRHSDLCCERRWHIAIPAILGAVGLTLSAYCSGSTLWMMAWICLAMSG TLALIPTYISLPGTLLSGTAAAAGIALVNSVGNLAGFFGPTVLGWLKDNTGSTNVGLYIL AAFLLLCAPLMFLLPAKLVNPRRNAGRS >gi|316917754|gb|ADCU01000021.1| GENE 271 298415 - 300124 1418 569 aa, chain + ## HITS:1 COG:MJ1276 KEGG:ns NR:ns ## COG: MJ1276 COG0129 # Protein_GI_number: 15669462 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Methanococcus jannaschii # 18 563 14 558 561 468 47.0 1e-131 MSGCKSCGTCGDGHFNPVLSGDDGALKRALYKSMGHTDEQLRRPVIAVVNSYTNATAGHA NLNELTAEVLKGIDEAGGVGMVFGTIAPCDGIAEGHLGMRYILAAREVITSSIEVMMRAH RFDGMVLLGSCDKIVPAMLMAAARLDIPAILVNGGPMYPAEYKGKHWDGNIVTEAIGWKR RGEIDEAEFRHIEDIAEPGPGSCTMYGTANTMCCISEVLGMSLPGSSTLPAVSQERRECA FRTGQTAVDLVKRGVNARQIITPQSIRNAMIYLLATGGSTNAILHLQAIHYEGEYGHLPL SDFDKLSHHVPLVASLYPASEYDMIDFWEAGGVAAVEKEIASLMDLNALTVSGQCKAEWL AQVPVSQRPEVIHTLAIPVRNEAGVAVLHGNLSPLGCVVKPAAVPEHLMIFTGPAVVFNS EQESVDAILSGDIASGSVLVLRYEGPKGGPGMPEMYKPMKCLEGMGLSDSCALITDGRFS GSNRGLFVGHISPEASDGGDLALVENGDTITINIPTRELTLNIDEATLAERRKHWVPLEK QVPRGFLRLYRRWALPAAQGAVLADRDEE >gi|316917754|gb|ADCU01000021.1| GENE 272 300127 - 301023 580 298 aa, chain + ## HITS:1 COG:MK1607 KEGG:ns NR:ns ## COG: MK1607 COG0329 # Protein_GI_number: 20095043 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Methanopyrus kandleri AV19 # 7 243 5 243 300 96 27.0 6e-20 MYQSADICGVNPIAAMPFSPQGELDVPSFSRMLEHLATTGIQGLTLFGIASEFPKLDDGE RLQLSNQFLSDLRGSGIFRAISVTDHSTEVAVKRARDYQKRGADALMLLPPFFLQPSPEA ISHHIFSVLEAVDIPVMVQYAPGETGLAITPEQLADVATRYPHAVFKIECNPPVDYTQKF LQQAPQASVLNGYAGLYMLQMLEAGGKGVMPGCSFSEIYVRIYQLWQNGDKAAAQELHKQ LLPWIQRWMTHCEYIIQVEKTILQRRGIITSDYCRHPGWTLTDQDRAMIDNFISTFSL >gi|316917754|gb|ADCU01000021.1| GENE 273 301039 - 301812 191 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 9 251 4 240 242 78 26 4e-13 MSTSAQQPRIIIVTGASQGIGHAIAQTFLKQGDIVIGCAFSSIEKAPHAKELLDLYPEHF HYYSVDITRTESIAEFIASVEQRFGRLDVLVSNAGKNVFKGIDCELEDWHHNLDLNLRSH WYMAKSCRSMLEKSKGVILVMTSNHAFSTMPGCAPYNITKRALLSLVQSLTIEWGPAIRS VGIAPGFIDTAGNQVWFDSHGDGEKARLETIAKHPVGRIGTSEEVGELCLFLASPAAGFI AGTTIIMDGGRSALMQD >gi|316917754|gb|ADCU01000021.1| GENE 274 302191 - 302607 350 138 aa, chain + ## HITS:1 COG:no KEGG:ETAE_3157 NR:ns ## KEGG: ETAE_3157 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 137 4 137 138 134 52.0 8e-31 MKKTLLALFVLAPFASIAAPTPQPMIGNYHAVGYTTCGGYKVLSSAISNENVMVLQITDP ITKASQIFYGDRSSDETEKVPYVLSNYDASTQKFTPDPSNTTIQFGIKMGNPGKPGNDLY NLTMGGQTYVCKQFTIFS >gi|316917754|gb|ADCU01000021.1| GENE 275 302702 - 304138 1130 478 aa, chain - ## HITS:1 COG:YPO1254 KEGG:ns NR:ns ## COG: YPO1254 COG2723 # Protein_GI_number: 16121541 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Yersinia pestis # 1 478 1 478 478 850 81.0 0 MKQQRLPDDFLWGGAVAAHQVEGGWDQGGKGLSIVDVLSSGAHGVDRVITDGIQDGYLYA NHEAVDFYHRYKGDIALFAEMGFKCFRTSIAWSRIFPNGDELEPNEAGLQFYDDMFDELL KYGIEPVITLSHFEMPWHLVKEYGGWKNRKIVDFFVRFSEVVIKRYQHKVKYWMTFNEIN NQRNWKTPLFGYCCSGVIYTNEPNPEECMYQVLHHQFVASALVVKLGHDINPELKIGCMI AMVPLYPYSCHPDDVMYAQEAMRERFLFGDVHMRGYYPSYILKEWERKGYHIEMQPGDEQ VLRAGCADYIGLSYYMSNAVQANSAGTGTALAGFEGSVPNPHVKASEWGWQIDPVGLRYT LNILYERYQKPLFIVENGFGAIDKPSADGQIHDDYRIAYLKSHIEQMKKAVIDDGVELMG YTPWGCIDCVSFTTGQYSKRYGFIYVDKHDDGSGTQQRAKKQSFDWYKQVIESNGEQL >gi|316917754|gb|ADCU01000021.1| GENE 276 304178 - 305689 1222 503 aa, chain - ## HITS:1 COG:BH0296_2 KEGG:ns NR:ns ## COG: BH0296_2 COG1263 # Protein_GI_number: 15612859 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus halodurans # 98 489 1 352 368 263 38.0 6e-70 MAINYADSAKEIVKLIGSDNNVISVTHCATRLRFVLKDNAQADKETLKRVKGVITVIESG GQLQVVIGNHVGDAYQEVLKLIHVDENAAVSAPNVGIVSRLMDIISSIFAPFLYPLAACG VLQGLISLFAVLGWMDPASGTYRILNFVSWTGFTFLPVMVAYTAAKKFNVNPFTAVIAAC ALVCPDYMNMLTANKILLVNSADPAMQALMKEAVNNPQIARVLTDVVGIPLSADPLTFLG MPVQYLSYTSAVIPIILMVWMMSYVQRFFERILPLVIRNLFTPMFCLAIIVPLTLLVFGP IGNMIGGAIGGVYNTLYHLSPAVAGFVVGALWTPLVTLGVHWGITPVTVGNYATLGYDTF TGLQASAVFGMAGAVLGVYLKSKDAEMKRVALSAGMTGLFGITEPAIYGVALRLKRPMVC ACMAGAVGGAIAGSFNAVSWSYCIPGIAVLPVFFKEGHLPQFLGFVLSISVAFVLGAIFT WFAGFKEDIPSAEVKTSSQPEAV >gi|316917754|gb|ADCU01000021.1| GENE 277 305930 - 306406 408 158 aa, chain - ## HITS:1 COG:YPO1253 KEGG:ns NR:ns ## COG: YPO1253 COG1737 # Protein_GI_number: 16121540 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 154 86 239 246 215 66.0 3e-56 MSFFKSIHNDEFEALITRTAEQIAEADRIIFVGAGTSGTLGKYGARFFSNVGKFSNYIDD PYYPISSDMYKNAIAVILSVSGETPEILKLASQFSLHQCKIISITNSETSSLARMADFNL SYHMPQILIASEYNITTQVPVIYMLEAIGKKLAKNLST >gi|316917754|gb|ADCU01000021.1| GENE 278 306672 - 306887 68 71 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E3230 NR:ns ## KEGG: SbBS512_E3230 # Name: not_defined # Def: putative IS1 encoded protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 35 71 1 37 37 65 97.0 8e-10 MAENRVEANAHNAGGCPASNAIHGHINDFLVRTGLRSGVSELQLPCFTAVRAEIALMSGS AFAVTHHPVSS Prediction of potential genes in microbial genomes Time: Wed May 18 15:39:34 2011 Seq name: gi|316917711|gb|ADCU01000022.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.22, whole genome shotgun sequence Length of sequence - 56099 bp Number of predicted genes - 43, with homology - 42 Number of transcription units - 29, operones - 11 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 175 - 441 147 ## COG1662 Transposase and inactivated derivatives, IS1 family - Term 266 - 305 -0.7 2 2 Tu 1 . - CDS 376 - 543 94 ## gi|194427442|ref|ZP_03059991.1| 2,3-diketo-L-gulonate-binding periplasmic protein YiaO - Prom 571 - 630 3.2 - Term 598 - 654 6.8 3 3 Tu 1 . - CDS 668 - 1981 1084 ## YE1296 glucose-1-phosphatase/inositol phosphatase - Prom 2029 - 2088 3.1 + Prom 1924 - 1983 6.8 4 4 Tu 1 . + CDS 2208 - 2543 270 ## NT01EI_3511 hypothetical protein - Term 2556 - 2594 6.6 5 5 Op 1 23/0.000 - CDS 2725 - 3414 571 ## COG1346 Putative effector of murein hydrolase 6 5 Op 2 . - CDS 3411 - 3851 394 ## COG1380 Putative effector of murein hydrolase LrgA - Prom 3883 - 3942 6.1 + Prom 3907 - 3966 5.0 7 6 Tu 1 . + CDS 3995 - 4912 302 ## PROTEIN SUPPORTED gi|30995401|ref|NP_438934.2| transcriptional regulator + Term 4985 - 5018 3.0 - Term 4972 - 5006 3.2 8 7 Tu 1 . - CDS 5106 - 6752 1318 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters - Prom 6882 - 6941 5.8 - Term 6924 - 6961 6.2 9 8 Op 1 . - CDS 7007 - 8374 1274 ## COG2252 Permeases 10 8 Op 2 . - CDS 8367 - 8552 87 ## 11 8 Op 3 4/0.300 - CDS 8628 - 9944 1063 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 12 8 Op 4 2/0.600 - CDS 9981 - 11441 322 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 11512 - 11571 6.5 - Term 11493 - 11536 -1.0 13 9 Op 1 12/0.000 - CDS 11598 - 14474 2109 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 14 9 Op 2 2/0.600 - CDS 14476 - 15252 857 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs - Term 15278 - 15310 5.4 15 10 Op 1 1/0.600 - CDS 15319 - 16647 1162 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 16 10 Op 2 3/0.500 - CDS 16650 - 19757 2831 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Prom 19865 - 19924 6.0 - Term 19893 - 19934 2.1 17 11 Tu 1 . - CDS 20123 - 20764 291 ## COG2068 Uncharacterized MobA-related protein - Prom 20856 - 20915 6.0 + Prom 20547 - 20606 4.4 18 12 Op 1 . + CDS 20799 - 21602 457 ## AHA_2168 hypothetical protein 19 12 Op 2 . + CDS 21637 - 23229 1078 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 20 13 Op 1 . - CDS 23284 - 24216 1081 ## COG0549 Carbamate kinase 21 13 Op 2 4/0.300 - CDS 24261 - 25649 866 ## COG0044 Dihydroorotase and related cyclic amidohydrolases - Term 25670 - 25712 10.2 22 14 Op 1 4/0.300 - CDS 25732 - 26949 1133 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 23 14 Op 2 2/0.600 - CDS 27025 - 28224 1091 ## COG1171 Threonine dehydratase - Term 28257 - 28292 6.5 24 14 Op 3 . - CDS 28304 - 29491 1190 ## COG0078 Ornithine carbamoyltransferase - Prom 29521 - 29580 2.0 25 15 Tu 1 . + CDS 30033 - 31781 970 ## COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 26 16 Tu 1 . - CDS 31868 - 32197 299 ## ETAE_3182 hypothetical protein - Prom 32221 - 32280 4.8 27 17 Tu 1 . - CDS 32439 - 32978 667 ## COG0629 Single-stranded DNA-binding protein - Prom 33138 - 33197 3.7 28 18 Tu 1 . + CDS 33407 - 36343 2759 ## COG0178 Excinuclease ATPase subunit + Term 36371 - 36409 9.2 - Term 36354 - 36402 12.1 29 19 Op 1 4/0.300 - CDS 36443 - 36790 364 ## COG2315 Uncharacterized protein conserved in bacteria 30 19 Op 2 . - CDS 36783 - 37211 340 ## COG0432 Uncharacterized conserved protein - Prom 37343 - 37402 6.2 - Term 37348 - 37384 3.3 31 20 Op 1 . - CDS 37416 - 37889 310 ## VIBHAR_05920 hypothetical protein 32 20 Op 2 4/0.300 - CDS 37886 - 39157 818 ## COG1972 Nucleoside permease - Prom 39192 - 39251 4.5 - Term 39183 - 39225 -0.8 33 21 Op 1 8/0.100 - CDS 39290 - 40228 930 ## COG2313 Uncharacterized enzyme involved in pigment biosynthesis 34 21 Op 2 . - CDS 40225 - 41343 690 ## COG0524 Sugar kinases, ribokinase family - Prom 41522 - 41581 4.6 - Term 41713 - 41746 4.1 35 22 Tu 1 . - CDS 41768 - 42958 1004 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase - Prom 43044 - 43103 2.3 + Prom 42949 - 43008 3.5 36 23 Tu 1 . + CDS 43196 - 44026 667 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 44128 - 44165 -0.3 37 24 Tu 1 . - CDS 44076 - 46394 2154 ## COG1032 Fe-S oxidoreductase - Prom 46495 - 46554 4.4 + Prom 46402 - 46461 3.3 38 25 Tu 1 . + CDS 46669 - 47628 644 ## COG1609 Transcriptional regulators + Term 47872 - 47918 -0.8 39 26 Tu 1 . - CDS 47625 - 49343 1100 ## COG4579 Isocitrate dehydrogenase kinase/phosphatase - Term 49403 - 49437 -0.7 40 27 Op 1 7/0.100 - CDS 49466 - 50776 1328 ## COG2224 Isocitrate lyase 41 27 Op 2 5/0.100 - CDS 50838 - 52436 1322 ## COG2225 Malate synthase - Prom 52560 - 52619 11.5 - Term 52722 - 52766 0.2 42 28 Tu 1 . - CDS 52802 - 53731 705 ## COG1897 Homoserine trans-succinylase - Prom 53791 - 53850 1.5 43 29 Tu 1 . - CDS 53881 - 55182 1001 ## COG0477 Permeases of the major facilitator superfamily - Prom 55256 - 55315 6.2 - 5S_RRNA 55454 - 55581 100.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. - LSU_RRNA 55685 - 56099 97.0 # EU285524 [D:3075..6064] # 23S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. Predicted protein(s) >gi|316917711|gb|ADCU01000022.1| GENE 1 175 - 441 147 88 aa, chain + ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 88 80 167 167 171 100.0 3e-43 MATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARL GRKSLSFSKSVELHDKVIGHYLNIKHYQ >gi|316917711|gb|ADCU01000022.1| GENE 2 376 - 543 94 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|194427442|ref|ZP_03059991.1| ## NR: gi|194427442|ref|ZP_03059991.1| 2,3-diketo-L-gulonate-binding periplasmic protein YiaO [Escherichia coli B171] # 6 55 286 335 335 64 58.0 2e-09 MFTHIALSTLNGLELMVYNYVIKNKDKVMGNDSNLLIVFYVQIMPDDFVMQLHRF >gi|316917711|gb|ADCU01000022.1| GENE 3 668 - 1981 1084 437 aa, chain - ## HITS:1 COG:no KEGG:YE1296 NR:ns ## KEGG: YE1296 # Name: not_defined # Def: glucose-1-phosphatase/inositol phosphatase # Organism: Y.enterocolitica # Pathway: Glycolysis / Gluconeogenesis [PATH:yen00010] # 6 435 5 432 433 543 60.0 1e-153 MKKITKGFFALSTLALLLPLGAQAAEPSNATPEGYQLEQVLIFSRHGIRAPLVGYGDILA ESTPHQWPVWKTEGGLLTPKGAEVETLFGKYMRDWLAQTGILPAKGCPTAGSVFVYANSL PRTIDTAKSFVSGAFPECSLKVNHQEKVGTMDPTFNPIITAKVTDEFKQKAIESINQHAG PGGIDGLNERLKPNYAVLQQVMDYGQSKVCSEKKTCSLADQPNTVNIVQDKEPGITGPLR VGTGASDGFMLQYYEGYPLKDVAWGQITDEKQWQQLEEIKNLYHETLFGSSAVAQNAAAP LMRFVSATLVGTPDTNALAADAHKAKVAVLVGHDSNIASLLAAMKTAPYDLPKQYEKTPI SGKIVFQRWHDKKDNRDLMKIEYVYQSTDQIRNATPLSLPTPAQRVILQIDGCKIDANGF CPMDDFKAAIAKDIKGE >gi|316917711|gb|ADCU01000022.1| GENE 4 2208 - 2543 270 111 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_3511 NR:ns ## KEGG: NT01EI_3511 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 110 1 110 111 158 71.0 6e-38 MYLRPDEVAQVLEKTGFIRDCVTDKAYGFHKGEHYVYVNREARMGRTALVIHPALGQKSL KFAHPAEPLRSSVAYTRFPQDPHAVETAFIGIPHGFTSRARLSQYLEKMFQ >gi|316917711|gb|ADCU01000022.1| GENE 5 2725 - 3414 571 229 aa, chain - ## HITS:1 COG:STM4272 KEGG:ns NR:ns ## COG: STM4272 COG1346 # Protein_GI_number: 16767522 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 295 72.0 5e-80 MSSLTISILCLLMTLGLYFANKKIYRRLHSIWMMPLVLTPLILVLFLVITHVSYQDYMGE NHWLLWLLGPATIAFAVPVYENMAIIRRHWMSLSAGVITATIVAVCSSVWLARLFTLSEE VQRSLAVRSITTPFALEAAKQMGGQPDLVALFVVITGVFGMAIGDILFLRLAVRSGMAKG AGLGASSHGAGTAKAYEIGQTEGVVSSLVMMLAGVVTVVLAPLIGHLMW >gi|316917711|gb|ADCU01000022.1| GENE 6 3411 - 3851 394 146 aa, chain - ## HITS:1 COG:STM4271 KEGG:ns NR:ns ## COG: STM4271 COG1380 # Protein_GI_number: 16767521 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Salmonella typhimurium LT2 # 1 130 1 130 136 128 66.0 4e-30 MSLALRSRAPFVLSRLQVPVQVALYAGLFLVAQWVVVQFHLPLPANIVGMLMLLAMIVLR VLPIKWVKAGSRWLLAEMLLFFVPAVVAVVNYASLLMIEGWRIFAVIAVSTMLTLGLTAL VVDKVYRFEIYMQRKKQTAAHKRDIA >gi|316917711|gb|ADCU01000022.1| GENE 7 3995 - 4912 302 305 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|30995401|ref|NP_438934.2| transcriptional regulator [Haemophilus influenzae Rd KW20] # 1 269 1 274 301 120 28 1e-26 IMDVRTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLRNLEDELGCSLIIREGRRLHLTD SGQAVYQRGLAILDQFSQLKAELEDIGTLKRGQLKLGIPPMVGTQMAGLISEFRQNYPGI ELIISEFGGLTVEQALLSGELDLALTALSGDIDPAIASLPLFSHPLCVLLPRSEVWLGRT SIHMEELAEQNILIYNEDFALYKQLMQAFAAHNVSPQIAVRSGQWDFLAAMVQANVGIAI LPEPICQRLDPKTLLWLPLEPKLMWELGLIWCEGRYLSHSAQAWIARCREFWPNGVMHPE WITLK >gi|316917711|gb|ADCU01000022.1| GENE 8 5106 - 6752 1318 548 aa, chain - ## HITS:1 COG:YPO3630 KEGG:ns NR:ns ## COG: YPO3630 COG0025 # Protein_GI_number: 16123772 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Yersinia pestis # 1 547 1 547 549 790 80.0 0 MEIFFTILILILVVSLSGVVTRMLPFQIPLPLMQIAIGALLAWPHFGLHVDFDPELFLVL FIPPLLFADGWKTPTREFLHHGREILGLALVLVLITVVGVGYFLHILLPEVPLVAAFALA AVLSPTDAVALGGIVGKGRIPKTIMGVLEGEALMNDASGLVALKFAIAVAMGTMVFTVGG ATLEFLKVAIGGLLAGVAVTWLYSKSLRVMSRWSGDDPATQIVLLMLLPFASYLIAEHAG VSGILAAVAAGMTISQSGVIRNAPLTMRLRANSVWAMLEFVFNGMVFIMLGLQLPGILES SIIQAERDPTIQTWYLFADVALVYAVLLVLRFLWLWCMRRLSLRFMKRNPLQFASYSLRD LWIASFAGVRGAITLAGVLSIPLFLTDGTPFPGRYQLVFIATGVILFSLIVGVVILPLLL KGMEVTDSNTYRDEETMAKSVTAEVAIESLKKMQERLEVDTEENIDPQLLTEVSSRVIGS LRRRISTKENAEEMRKVENLERRFRLTALRAERGELYHLRATQKISNETLQKLLHDLDLL EALLVEKS >gi|316917711|gb|ADCU01000022.1| GENE 9 7007 - 8374 1274 455 aa, chain - ## HITS:1 COG:ECs3757 KEGG:ns NR:ns ## COG: ECs3757 COG2252 # Protein_GI_number: 15833011 # Func_class: R General function prediction only # Function: Permeases # Organism: Escherichia coli O157:H7 # 1 455 1 455 455 630 88.0 1e-180 MSSNASQEGSAGKSGGSLDAYFKISARGSSVRQEVLAGLTTFLAMVYSVIVVPSMLGKAG FPPAAVFVATCLVAAFGSLLMGLWANLPMAIGCAISLTAFTAFSLVLGQHISIPVALGAV FLMGVLFTLISVTGIRSWILRNLPMGIAHGTGIGIGLFLLLIAANGVGLVIKNPIEGLPV ALGAFTSFPVMMSLLGLAIIFGLEKLKVPGGILLVIIGISIVGLIFDPSVKYQGLFALPS LTAEDGSSLIFSLDIMGALKPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIIN GGKALTADSVSSIISSFVGASPAAVYIESAAGTAAGGKTGLTATVVGILFLLILFLSPLS YLVPGYATAPALMYVGLLMLSNVSKLDFNDFVDAMSGLVCAVFIVLTCNIVTGIMLGFTT LVVGRIFSNEWRKLNIGTVIIAIALVAFYAGGWAI >gi|316917711|gb|ADCU01000022.1| GENE 10 8367 - 8552 87 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTDVLDGVIVCFAVFVALISTANGYRKVTVIRKTQVQAFIILNKIIVIMRNVKTLRGHQY V >gi|316917711|gb|ADCU01000022.1| GENE 11 8628 - 9944 1063 438 aa, chain - ## HITS:1 COG:ygfP KEGG:ns NR:ns ## COG: ygfP COG0402 # Protein_GI_number: 16130785 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 437 2 438 439 800 84.0 0 MSEQKSLKAIRGNFLDIVKTVEQPEEIESHLRFIEDGLMLVRSGKVEWFGQWEEGKHLIP EGIRVRDYSGKMIVPGFIDTHIHYPQSEMVGAYGEQLLEWLNKHTFPAERRYNDIEYARE MSAFFIKQLLRNGTTTALVFGTVHPESVDALFEAAHNINMRMIAGKVMMDRNAPDYLLDT AETSYTQSKALIERWHRNGRLLYAITPRFAPTSTPEQLAMAQRLREEYPDTYLHTHLCEN KDEIAWVKSLYPDRKNYLDVYHHYGLTGKNSVFAHCVHLEEQEWDCLRDSGSSIAFCPTS NLYLGSGLFNLKKAWHKQIKVGMGTDIGAGTTFNMLQTLNEAYKVMQLQGWRMSAYEAFY LATLGGAKALGLDDIIGNFNVGKEADFVVLEPTATPLQQLRYDNSVTLMDKLFVMMTLGD DRSIYRTYVDGQLVYERT >gi|316917711|gb|ADCU01000022.1| GENE 12 9981 - 11441 322 486 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 28 481 7 445 447 128 26 6e-29 MSDVQQVADKTVKQEHPYASDSELIYHLDDKPPLHEMLIGAVTHLLAIFVPMVAPALIVG TALGLSPEITAYLVSMAMIASGIGTFIQVNRFGRVGSGLLSIQSVNFSFVTVMIALGGSM KKEGLDEQAIISSLLGVAFVGAFLVVASSQVLPYLKRVITPTVSGVVVLMIGLSLIKVGI IDFGGGLPAKGDGSFGSYQNLGLGFLVLCVVIGFNCCQNALLRMGGIAIGLVVGYICALF MGIVDFSTLKDLPLITIPQPFKYGFSFDFHAFLVAATIYLLSILEAVGSITATAIISERP IVGEEYDKRLSGGVLADGLVSVIACALGSLPLTTFAQNNGVIQMTGVASRHVGKYIAAIL VILGLFPVIGRFFTTIPAPILGGAMTLMFSMIALAGIKIILCGGMDRRETLIVATALGIG LGVSYDPQIFRVLPDSVYVLFENPICAGGVTAIILNLLIPHVKKYGQEDELEELIKPVTE NFTQAK >gi|316917711|gb|ADCU01000022.1| GENE 13 11598 - 14474 2109 958 aa, chain - ## HITS:1 COG:ECs3754_2 KEGG:ns NR:ns ## COG: ECs3754_2 COG1529 # Protein_GI_number: 15833008 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli O157:H7 # 160 956 1 797 797 1411 83.0 0 MNIRFTLNGTPRTLSCEPGDNVQKILFNLGLHSVRNSDDGFGFAGSDAIIFDGVIVNASL LIAAQLDGSVVRTAESLGTWNQLSPVQQAMVDVGIVQSGYNDPAAALILTDLLERISSPS RSQIDDALSGLFSRDAGYQQFYQVVELAQARMSDPFCQREIAPEFRDDLQVVGKLCPKVD SAKMVQAKPCYVEDRIPENACVIKMLRSPHPHALITHLDVSKAEALPGVVHVITHLNCPD IYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALAALALIDVSFEVLQPV MSIDEAMAEDAPLVHDEPIVYVNGAPADLEVQNRGSATRGEHMIINFPIGAKPHKNIAAG VHGRIGDVEKGFAQADVVIERTYESTQAQQCPTETHICFTYMDGERLVIHASTQVPWHVR RQVARLVGLKQNKVHVIKERVGGGFGSKQDILLEEVCAWATCVTGRPVYFHYTREEEFIS NTTRHVAKVKVKIGATKEGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSLPLYPCDNVN FQVTTYYSNICPTGAYQGYGAPKGNFALTMALAELAEQLDIDLLDMIELNRVTEGQELKI LGAIGEGKMPTSVPTAASCALEPILRKGRELMNWGENKAPQGDWRIGQGVAIIMQKSGIP DIDQANCMVKLESDGTIIVHSGGADIGTGLDTVVTKLTAEVLCCPLADVHVISGDTDHAL FDKGAYASSGTCFSGNAAKKAAENLKEKIRFHGAQMLGEPIEDVTIVAPSIVRGKQGEVS FAEIAHKAETGTGFGTLVATASYITPDFAFPFGANFAEVAVNVRTGEIRLDKFYALLDCG TPVNPELALGQIYGASMRAIGHSLTEKLIYDKTGNPITRDLQTYGAPKIGDIPRDFRAFL VPSDDKVGPFGAKSISEIGVNGAAPAIATAIHDACGVWLREWHFTPEKILRGLNKLEA >gi|316917711|gb|ADCU01000022.1| GENE 14 14476 - 15252 857 258 aa, chain - ## HITS:1 COG:ECs3753 KEGG:ns NR:ns ## COG: ECs3753 COG1319 # Protein_GI_number: 15833007 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli O157:H7 # 1 257 1 257 259 304 60.0 9e-83 MIEQFYRPESVKQALELKRQFQDQAVYFGGGSKLNATPTKTTKKIAIDLSKLGLNKVSWQ QGQLHIGAQIKLQALIDTPLIPESLRNALGFIYSRHLRNQASLAGEAVAKQKERVLLPVL YALDAQVITATGETLSLEEYVCHDRDDLLLEVILPDPYRRCATRKVARSAAGLAVVTAAV ALTSKGEMKIALDGVSEQPIRLRDVESRGLSDDALEKAVSDVIHPRADIGGSEAYKRYIA GVVVAELLADCQQMSEEK >gi|316917711|gb|ADCU01000022.1| GENE 15 15319 - 16647 1162 442 aa, chain - ## HITS:1 COG:Z4218 KEGG:ns NR:ns ## COG: Z4218 COG0402 # Protein_GI_number: 15803416 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 EDL933 # 1 442 23 464 464 714 76.0 0 MLILKNVTAVQFEPASVQHGVDIAVEGALIKEVGHQLTAKYPQAQVKDMQGKLVMPGIVC AHNHFYSGLSRGIMANIAPSPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCT AVIDHHASPNYIAGALNTLRKGFIKAGLRGMTCFETTDRNGGNKELQAGVEENIAFAQQI DSAKKRGDEPYLVEAHIGAHAPFTVSDAGLDMLREAIKATGRGLHIHAAEDSYDVSHSHD KYGKDLIVRLAEHDLIDAKTLVAHGLYLSPADIEIINQQDAFLVHNARSNMNNHVGYNHR IGEYRNLALGTDGIGSDMFEELKFAFFKHRDAGGPLWPDSFTRFLWNGNRLLERNFSARF GCLEAGYKADLTVCDYPEPTPLAAQNIGGHLAFGMGAGSVKSVMVEGRFVYENGQFPFDV APIYAEANKVAERLWKRMDSLA >gi|316917711|gb|ADCU01000022.1| GENE 16 16650 - 19757 2831 1035 aa, chain - ## HITS:1 COG:ygfK_2 KEGG:ns NR:ns ## COG: ygfK_2 COG0493 # Protein_GI_number: 16130780 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 453 1035 1 582 582 995 79.0 0 MGDIMRPVPFEELLTRVFAEYHESRSIFGIPEQQFYRKDNDRLIKVFGETCETPMGPAAG PHTQLAQNIIVSWLTGGRFIELKTVQILDRLELDKPCIDAEDECFNTEWSTEFTLQKAHD EYLKAWFVLHLLEAIFDPRTPGEAKSFIFNMSVGYNLEGIKQPPMQNFIHNMMDSAQHPK YAEYQSILASFIGDKDFTQRLALESRSAQLSTLPQQIPAQMVHGVTLSTMHGCPPNEIEA ICRYMLEEKALNTFVKLNPTLLGYPRVREILDTCGFDYIGLKEESFEHDLKLEQAISMLQ RLIALGKEKQLSFGVKLTNTLGTINHKGALPGEEMYMSGRALFPLSINVAAVLSRAFNGE LAISYSGGASKFNIREIFDTGIRPITMATDLLKPGGYLRQLECMRELDQSDTWGMTKVDV DRLEALAKKAVSMEYTQKHWKAQDRIDAGGPLPMTDCYVAPCVTACAIKQDIPEYIRLLG EQRYADALELIYQRNALPAITGHICDHQCQYNCTRLDYDSALNIRELKKVALEKGWDEYK QRWHKPAGSGSKHPVAVLGAGPAGLSAGYFLARAGYQVTLFEREANAGGVVKNIIPQFRI PAETIQHDIDFVAAHGVKFEFGCDPELTVDKLMQQGFSYVFVGIGTDKNSGVKLAGDNRN VYKSLPFLRSYNRGDKLSLGRHVAVVGAGNTAMDCARAALKVPGVEDVTVIYRRTLNEMP AYREEYEEAVEDGVKFMFLTNPEQFDADGTLVARVMELGEPDEKGRRRPVATDKTIKLQM DALITAIGEQADCAALGAMGVPLNAEGWPAVANDTGETTRPNVFLIGDVQNGPSSIVAAI GTARRATDEVLKRENIRSHHHDKQWSNVDPAEIYQRKGAISVVMVDKEEREAFVAQEAQR CLECNYICSKCVDVCPNRANVSIAVPGFHDRFQTLHLDAYCNECGNCAQFCPWEGKPYKD KITIYSLPEDFTNSTNPGFYVDEQNVSVRQGKQIWHLHIDEHGQLDEVPAELEDMCRIIS HVHNHHHYLLGRVEV >gi|316917711|gb|ADCU01000022.1| GENE 17 20123 - 20764 291 213 aa, chain - ## HITS:1 COG:ygfJ KEGG:ns NR:ns ## COG: ygfJ COG2068 # Protein_GI_number: 16130779 # Func_class: R General function prediction only # Function: Uncharacterized MobA-related protein # Organism: Escherichia coli K12 # 25 204 4 182 192 208 54.0 6e-54 MNHKLGKHQRAVISSIVDMSPRENVDCIITAAGLSSRMGQWKMMLPYNGGTILDSSIENA RQFCQRIILVVGYRGEELLARYNNESDITVIINNNYASGLFSSIQAAGKNVNTEYCFITH GDIPCLNREIYHQIWLKRGPYALLPCHQGTPGHPVLLPKKIIQQACMDDVTTTSMREFLL AGEYRYLNMNQPQTVMDIDTPEAYQLLLGTSHD >gi|316917711|gb|ADCU01000022.1| GENE 18 20799 - 21602 457 267 aa, chain + ## HITS:1 COG:no KEGG:AHA_2168 NR:ns ## KEGG: AHA_2168 # Name: not_defined # Def: hypothetical protein # Organism: A.hydrophila # Pathway: not_defined # 3 260 12 267 282 235 50.0 2e-60 MIPNIDVLFNDVVSNVQNKRAYLISLIGAGGKTSTLFWLAQFFAQQGLSVLITTTTRMYR PESSQANPIIIEKDYWPTLLQQAKVPTRLPKIVALFTEYNADTQKVSGITPEQADELNRA HLFDIILVEADGAHQKPLKAPAGHEPCIPLSSNCVIALTGGSVINRPADPEHIHRWPIFA AVCGIKAGDVLQLSVFEKFISHPEGMFKGAPKHPLRIWLINQLYQIDNALLDALNGLLES QPELSAIWVGAIQEHPPITHQLRQSHK >gi|316917711|gb|ADCU01000022.1| GENE 19 21637 - 23229 1078 530 aa, chain + ## HITS:1 COG:yqeB KEGG:ns NR:ns ## COG: yqeB COG1975 # Protein_GI_number: 16130777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Escherichia coli K12 # 1 526 1 526 541 733 71.0 0 MNIFAQAARLEEENKPFALAQIIESRGSTPRHSGQMLVLADGSIFGTIGGGMVERLVIEQ ALEALSERKARVFHGRMARNGQDAVGSDCGGAMSVYIDVHGLRPRLILIGAGHVNRAIAQ AAAPLGFDLHVADTYASSLDPALFPAGTTLVHADSFSAVIEKLNIEKENFVIIATNNQDK EALDVLIEKPLCYLGLLASRRKVQTFTQALRQQGVSAALIERLHAPIGYNIGAETPEEIA VSILAEVLQVKNQAAGGLKQDDVRLKRDKLVVIRGSGDIATGVALRLFHSGFHVLMLDIA KPTVIRRTVAFAQAIFDGEACVEGVTARKANGIDEAFSILDRGEIPVLVDEKASYLDELK PRFLVDAILAKQNLGTHKDMAPITVALGPGFNAGHDCDAVIETNRGHYLGRVIYQGYTQP NTGIPGNISGHTTRRVIRAPASGIMHCCVALGDLVKEGDVMAHIGEAPVFAPLTGMVRGL LSEGLEVCEGFKIGDIDPRGAEADYMTVSDKARAIGGAVLEAMMKLDRKH >gi|316917711|gb|ADCU01000022.1| GENE 20 23284 - 24216 1081 310 aa, chain - ## HITS:1 COG:yqeA KEGG:ns NR:ns ## COG: yqeA COG0549 # Protein_GI_number: 16130776 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 1 308 1 308 310 488 84.0 1e-138 MKKKIVLALGGNALGEGLAEQMQAVKSTAKAIVDLIAHGHQVVVTHGNGPQVGMINQAFE AAAKTEAHTPMLPMSVCVALSQGYIGYDLQNALREELLDRGLQTPVATIITQVIVDAKDP AFANPTKPIGSFFSQEEAELLTRNGYIMKEDAGRGYRRVVASPKPVDIVEKETVQAMLEA GQVVITVGGGGIPVLREGNHLRGAGAVIDKDWASAKLAEMIDADMLIILTAVEKVAINFG KPNEQWLDQLSIADAQRFIEEGHFAKGSMLPKVEAAVSFAESRAGRQALITVLSKAQQGI EGKTGTVIAN >gi|316917711|gb|ADCU01000022.1| GENE 21 24261 - 25649 866 462 aa, chain - ## HITS:1 COG:ECs3746 KEGG:ns NR:ns ## COG: ECs3746 COG0044 # Protein_GI_number: 15833000 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Escherichia coli O157:H7 # 1 462 5 465 465 728 72.0 0 MKKLIINGVVVNADGETRQDLLIENGIISHMAEHISSEDADELIDAEGCYVMPGGIDVHT HFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPAGCNLHHQLKAYHQYAAGKAVV DYSFHGVIQHIDDEILNEMSSMVHEEGISSFKLYLTYNYKLGDADVLRALQQLHRVGALA TVHPENDAAIALRRKQYLSEGKTSPMYHALSRPLECEAEAISRMINLAQLAGNVPLYIVH LSNGLGLDYLRLARAHHQPVWVETCPQYLLLDERCYQQEDALKFILSPPLRNHQEQDKLW CGITDGAIDTVATDHCSFPYHQRISMSDGNFTLCPNGLPGVENRMQLLFSEGVMTGRISP ARFVQLTSANPARLFGLWPQKGNLAVGADADVVIIDPQKTTTIEHTHLHDNADYSPYEGF RCRGEIITTLCRGANVFQAGKFTGQAGYGRFIHRQPFAQPSM >gi|316917711|gb|ADCU01000022.1| GENE 22 25732 - 26949 1133 405 aa, chain - ## HITS:1 COG:ECs3745 KEGG:ns NR:ns ## COG: ECs3745 COG0624 # Protein_GI_number: 15832999 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli O157:H7 # 1 400 1 400 403 761 88.0 0 MAKQVPFEMVLEKAYQYKDEMTRFLRDMIAIPSESCDEKLVVQCIKKEMEKVGFDKVEID PMGNILGYIGHGPHLIAMDAHIDTVGIGNIKNWTFDPYQGMEDDELIGGRGASDQEGGMA SMVYAGKIIKDLGLEDQYTLLVTGTVQEEDCDGLCWQYIIEQSKIRPEFVVSTEPTDCQI YRGQRGRMEIRVDVQGISCHGSAPERGDNAIFKMGPILNELKELSHNLGNDEFLGKGTLT VSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALEEIRALPAVKASKAVVSMYNYDRP SYTGLVYPTECYFPTWKVEEDHITVKTLSKAYEGLFNKKPVVDKWTFSTNGVSIMGRHGI PVIGFGPGKEPEAHAPNEKTWKDHLVTCAAMYAAIPLSYLDELKK >gi|316917711|gb|ADCU01000022.1| GENE 23 27025 - 28224 1091 399 aa, chain - ## HITS:1 COG:ECs3744 KEGG:ns NR:ns ## COG: ECs3744 COG1171 # Protein_GI_number: 15832998 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 395 1 394 398 689 82.0 0 MSVFSLKVDIAQNRFFNGETSPLFSRVEAQKARAFHKKITGYQPTPLRSLEELAQLFGVS KILVKDESQRFGLNAFKMLGGAYAIARLLCEKYQIDINEFSFEKLKATLTEKMTFATTTD GNHGRGVAWAAQQLGQNAVIYMPKGSARERVDHIRNLGAECIVTDMNYDDTVRLTMKTAQ ERGWEVVQDTAWEGYTKIPTWIMQGYSTLADEAVEQMQAMGVQRPTHVFLQAGVGAMAGG VLGYLVDVFGAEKLHSVIVEPDLADCVFRSGLKGEIVNVGGDMATIMAGLACGEPNPLGW PLLRNCATQFISCQDKVAALGMRVLGNPLGKDPRIVSGESGAVGLGVLAAVHHHPKREEL MQELGLNHDSVVLLISTEGDTDVKHYREVVWEGKHPACS >gi|316917711|gb|ADCU01000022.1| GENE 24 28304 - 29491 1190 395 aa, chain - ## HITS:1 COG:ECs3743 KEGG:ns NR:ns ## COG: ECs3743 COG0078 # Protein_GI_number: 15832997 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Escherichia coli O157:H7 # 1 395 2 396 396 745 90.0 0 MRTVNELIKDINALKSNLHEKDFLLTWEQSPEELKLVLDLAEALKTMRAENIATKIFNSG LGISVFRDNSTRTRFSYASALNLLGLTQQDLDEGKSQIAHGETVRETANMISFCADAIGI RDDMYLGAGNAYMREVGAALDEGYEQGVLPQRPALVNLQCDIDHPTQSMADLAWLQEHFG SLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVAVAK QNAESSGGSFRQVNSMAEAFKDADIVYPKSWAPYKVMEERTELLRANDHDGLKALEKQCL AENAKHKDWHCTEEMMKHTKGGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEA SWKPYIIAAMIVARKFSKPGLVLEQLLKEAQKRIK >gi|316917711|gb|ADCU01000022.1| GENE 25 30033 - 31781 970 582 aa, chain + ## HITS:1 COG:ygeV KEGG:ns NR:ns ## COG: ygeV COG3829 # Protein_GI_number: 16130771 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli K12 # 1 579 11 589 592 870 72.0 0 MQIQPTILRFTKMLASVLQLEVEIVDANMTRVSGTGPYGKFFGRKLNSNSRLLRYVLDTK QEKVVIHSRFDPVCEGCTSKDSCKEKAFLGIPIIFQNACIGVISLVAFTPEQQERIKDNI HEFSDYVRHISNLFVSKLLENQGGSDGINKILMSLIENMDQGVLVIDNENKAKFANPTAL KQLNATQEQIIGKTFNIRPLTFQQNYTSGHLQHIISFDEQQELIIGQLHDIQDHQLFLMA FHQSHSPMNVDFNPDDPRIEHLVGECRPIRILKRLITRVAPSPSSILIVGESGTGKEVVA RAIHQLSDRNNKPFIAINCAAIPDQLLESELFGYVKGAFTGASANGKIGLIQAANNGTLF LDEIGDMPLTLQAKLLRAIESREVQPIGSSKPISVDIRIISATNQNLEQYIADGKFREDL YYRLNVIPMTLPPLRERQGDIELLAHYFLNLHTKRIGIVYPGMAPEVMSLLKLYRWPGNV RELSNLMEYLINVVPSGEVIDISLLPPNLVNGQVTRTYREDIPYQSAAACEEHGATGLED MERQMIREALSRHNNKKQAADELGIGIATLYRKIKKYELTSL >gi|316917711|gb|ADCU01000022.1| GENE 26 31868 - 32197 299 109 aa, chain - ## HITS:1 COG:no KEGG:ETAE_3182 NR:ns ## KEGG: ETAE_3182 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 109 2 109 109 92 62.0 7e-18 MIRRISWIAGAGAWLLPLVLLLWQWLTEGQNQAALSPEAYNAWKMSVLFADFSFAGALSL FAVLLGAMALAKTQENEILHPGKRMLELLILALPMMLCLFIMGILLVHG >gi|316917711|gb|ADCU01000022.1| GENE 27 32439 - 32978 667 179 aa, chain - ## HITS:1 COG:ECs5041 KEGG:ns NR:ns ## COG: ECs5041 COG0629 # Protein_GI_number: 15834295 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Escherichia coli O157:H7 # 1 179 1 178 178 226 78.0 2e-59 MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSETWRDKQTGEQKEKTEWHRVVL FGKLAEVAGEYLRKGSQVYIEGALQTRKWTDQAGVEKYTTEIVVNVGGTMQMLGGRQGGG APMGGGQAQGQQGGWGQPQQPQGNQFSGGSQPAARPQSAPAAQPQSNEPPMDFDDDIPF >gi|316917711|gb|ADCU01000022.1| GENE 28 33407 - 36343 2759 978 aa, chain + ## HITS:1 COG:YPO0324 KEGG:ns NR:ns ## COG: YPO0324 COG0178 # Protein_GI_number: 16120661 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Yersinia pestis # 36 978 1 943 947 1759 91.0 0 MGALWAFPYTAISANGQKCTADKPNEMGSSSGKSLMDKIEIRGARTHNLKNINLTIPRDK LIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISI EQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLTQPEG KRLMLLAPIVKDRKGEHTKTLENLAAQGYIRARIDGEVCDLSDPPKLELQKKHSIEVVVD RFKVREDMAQRLAESFETALELSGGSAIVADMDDSKAPELLFSANFACPICGYSMRELEP RLFSFNNPAGACPTCDGLGVQQYFDPDRVVQNAELSLAGGAIRGWDRRNFYYFQMLKSLA DHYHFDVESPFESLDAKTQKAVLYGSGKESIEFKYINDRGDITVRNHPFEGVLHNMERRY KETESSAVREELSKFISNRSCASCHGTRLREEARHVFVENTTLPEISDLSIGNALEFFRD IKLQGQCAQIAEKILKEIGDRLKFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGL VGVMYVLDEPSIGLHQRDNERLLETLVHLRNLGNTVIVVEHDEDAIRAADYVIDIGPGAG VHGGEVVAQGSVDEIMAVPESLTGQFLSGKREIAVPSERVPADATKVLKLIGASGNNLKD VTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATLSEPAPYRAVEGMEHFDKV IDIDQSPIGRTPRSNPATYTGIFTPVRELFAGVPESRARGYNPGRFSFNVKGGRCEACQG DGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKSIHEVLDMTIEEAREFFDAVPA LARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKLSRELSKRGTGQTLYILDEPTTGLHF ADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGGGGGQILVSGTPETVA ECEQSHTARFLKPLLKKK >gi|316917711|gb|ADCU01000022.1| GENE 29 36443 - 36790 364 115 aa, chain - ## HITS:1 COG:ECs5039 KEGG:ns NR:ns ## COG: ECs5039 COG2315 # Protein_GI_number: 15834293 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 115 1 115 118 137 59.0 4e-33 MNNSAFLQYCMAKPGAEQSVQNRWRANQVKVGGVMFAMVDHIEGRPAVALKMSCEQAAQL RSEHKDIVPSPNLNKAHWSTIFLDGTLNDSLLYKLVDGSYSLALNHVGEQTRQGL >gi|316917711|gb|ADCU01000022.1| GENE 30 36783 - 37211 340 142 aa, chain - ## HITS:1 COG:ECs5038 KEGG:ns NR:ns ## COG: ECs5038 COG0432 # Protein_GI_number: 15834292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 138 1 138 138 218 72.0 3e-57 MWYQHTIVLHAKPRGFHLITDEIIEKLPQLASVNVGILHLLLQHTSASLTLNENCDPTVR DDMERHFMRTVSEDAPYEHDYEGADDMPAHIKSSLLGTTLTLPICKGKLQLGTWQGIWFG EHRVHGGSRRIVATIQGDIVHE >gi|316917711|gb|ADCU01000022.1| GENE 31 37416 - 37889 310 157 aa, chain - ## HITS:1 COG:no KEGG:VIBHAR_05920 NR:ns ## KEGG: VIBHAR_05920 # Name: not_defined # Def: hypothetical protein # Organism: V.harveyi # Pathway: not_defined # 3 148 45 191 206 119 44.0 5e-26 MMKSETRLLLCLALSTGVLSGVWAWLAEQFVLMSWIGFLGCTTYFAIPSKGLAGLCRGMA ANISGASWAAIAIALTTSTGFSYAAVITGAISFMMCAQSRLRTLCFVPGSFIGACALFGS QSGWLSVVLTLCLGGIFGFLMQSSGTWMANRWSSVYN >gi|316917711|gb|ADCU01000022.1| GENE 32 37886 - 39157 818 423 aa, chain - ## HITS:1 COG:yeiJ KEGG:ns NR:ns ## COG: yeiJ COG1972 # Protein_GI_number: 16130099 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Escherichia coli K12 # 1 417 1 416 416 497 72.0 1e-140 MDLLRSLFGIVILLLIAFIFSNNRKKISLRTVGAALLLQVILGAVMLYIPAGKWLVNSIA AGVNKVISYSDAGSSFIFGGLVGPKMNVLFDGAGFVFAFHVLPAIIFITSLISILYYIGV MGWVINILGYVFQKMMRVSKVEAFAAVTTIFLGQNELPAVLKPFISKMNRNELFTVICSG MASIAGSMLVGYAGLGVPIEYLLAASLMAIPGGILFARMLSPATEASQVEFSQMSFSDKR PASVIEAAASGAMLGLKIAVGVATVVMAFVALIALINGIVGGVGGLFGWSGVSLESLLGY IFSPLAYIMGVSWDNSALAGGLIGQKLAINEFVAYVNFSPYLKDAAGVLDPKTIAVISFA LCGFANFGSIAVVVGAFSAVAPERASDIARLGLRALLAATLSNLMSATIAGLFIGLGALA IAS >gi|316917711|gb|ADCU01000022.1| GENE 33 39290 - 40228 930 312 aa, chain - ## HITS:1 COG:ECs3057 KEGG:ns NR:ns ## COG: ECs3057 COG2313 # Protein_GI_number: 15832311 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized enzyme involved in pigment biosynthesis # Organism: Escherichia coli O157:H7 # 6 312 6 312 312 453 78.0 1e-127 MKNNVMTNEYLDISPEVAEALANNRPVVALESTIISHGMPYPQNAETALAVEQQIRENGA VPATIAIINGRMKAGLSREEIELLGKEGHNVAKVSRRDLPFIVAAGKNGATTVASTMIIA EMAGIHVFATGGIGGVHRGAEQTFDISADLQELAKTNVAVICAGAKSILDLGLTTEYLET HGVPLIGYRTQVLPAFFCRTSPFSVSIQLDEPEQIAKAMATKWQSGLEGGMVIANPIPEQ FAMPEAKINAAIEQAVQESVEQGIHGKDSTPFLLARVAELTGGDSLHSNIQLVFNNAKLA AQIARCYQETAA >gi|316917711|gb|ADCU01000022.1| GENE 34 40225 - 41343 690 372 aa, chain - ## HITS:1 COG:ECs3058 KEGG:ns NR:ns ## COG: ECs3058 COG0524 # Protein_GI_number: 15832312 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 63 369 1 307 313 384 59.0 1e-106 MFKNKQVSNMTSREKQILQLLRRDPLIPQQEIADVLGISRSGVAGHIMNLMKKGYIKGKG YILSEHSYVVTVGSTNMDVCGYSASKLVYEDSNPGKIKCTPGGVGRNIAQNIALLGRECH LISVVGDDFYGDTLLEQAKLAGVHIDSFHKLHGESTSTYVSLLDESGEMLVAINDMRILE KLTPALLATSKDLIQHAGVLVVDCNLTEDALAWLFSHAGSVPIFVDTVSAFKAPKIRNWL SHIHTLKPNRLEAEILSGMTITGPQDAPAVATWFHEQGVQRIALSMGPAGVYYSEIDGQS GWSSPLPVNIVNVTGAGDAMMAGLASCWLEDMTLAESIRFAQGCSALTLSSEFTNNPNLS NGSVQKLLELQS >gi|316917711|gb|ADCU01000022.1| GENE 35 41768 - 42958 1004 396 aa, chain - ## HITS:1 COG:YPO0322 KEGG:ns NR:ns ## COG: YPO0322 COG1448 # Protein_GI_number: 16120659 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Yersinia pestis # 1 396 1 396 397 629 75.0 1e-180 MFQHVDAYAGDPILSLMDTFKQDPRADKVNLSIGLYYDEEGTIPQLKAVAAAEELLNARA GAASLYLPMEGLAPYRSAIQSLLFGDSHSMVAQNRIATVQTIGGSGALKVGADFLKHYFP DSEVWVSDPTWENHIAIFSGAGFKVHQYPYFDPETLGVNFDAMLNTLNQLPARSIVLMHP CCHNPTGSDLTNEQWDRVVEVAKARELIPFLDIAYQGFGAGMEEDAYAIRAMAQAELPCL VSNSFSKIFSLYGERVGGLSVVCESPEAANRVLGQLKATVRRIYSSPPNFGAQVVATVLN DPKLKAMWLEEVESMRLRIIEMRRTLVDGLKAVLPQRNFDYLMSQRGMFSYTGLSAKQVD RLREEFGVYLIASGRMCVAGMNHANALRIAQSFAAV >gi|316917711|gb|ADCU01000022.1| GENE 36 43196 - 44026 667 276 aa, chain + ## HITS:1 COG:YPO0676 KEGG:ns NR:ns ## COG: YPO0676 COG0656 # Protein_GI_number: 16120999 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Yersinia pestis # 1 273 1 273 277 449 78.0 1e-126 MSTQPLIKLSDGHAMPQLGLGVWQATNEQVVTAIETALETGYRSIDTAAIYGNEEGVGKA LAASNISRDELFITTKLWNSDQSNPAKALEESLQKLRLDYVDLYLIHWPAPAQDKYVSAW KSLIDLKKQGLIKSIGVCNFNIPHLQRLIDETGVSPTVNQIELHPLMQQKPMHAWNATHH IATESWSPLAQGGEGVFDTEIIHKLAQKYGKSPAQIVIRWHLDSGLIVIPKSVTPKRIRE NFGVFDFKLDKEELSQIAKLDCGKRLGPDPDTFEKI >gi|316917711|gb|ADCU01000022.1| GENE 37 44076 - 46394 2154 772 aa, chain - ## HITS:1 COG:ECs3900 KEGG:ns NR:ns ## COG: ECs3900 COG1032 # Protein_GI_number: 15833154 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 748 1 736 739 1274 82.0 0 MSSISLIQPERDLFSYTPYWAECYGTAPFLPMSREEMDTLGWDSCDIVLVTGDAYVDHPS FGMAIVGRMLEAQGFRVGIIAQPDWTSKEDFMRLGKPNLFYGVTAGNMDSMINRYTADRK LRHDDAYTPNNESGKRPDRATLVYTQRCKEAFSDVPVILGGIEASLRRIAHYDYWSDTVR RSVLVDSKADMLMYGNGERPLVEVAHRLASGEPISSIVDVRNTAVMRKEALPGWSGVDST RLDKPGRIEPIPNPYGDDLACAPDAGKKKDDDVQPITVRAPKPKPWEKTYVLLPSYEKVK NDKVLYAHTSRILHHETNPGCARALMQKHGDRYIWINPPAIPLSTEEMDSVFALPYQRVP HPSYGSARIPAYEMIRFSINIMRGCYGGCSFCSITEHEGRIIQSRSEDSIIREIEEIRDK VPGFTGVISDLGGPTANMYMLRCQSPRAEQTCRRASCVYPEICQHMDTNHEPTIKLYRRA RDLEGVKKILIASGVRYDLAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMG SYHRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKNRFRLDQVQNFYP SPLANSTTMYHTGKNPLGKVDYKSEDVVVPKGDRQRRLHKALLRYHDPANWPMIRTALEE MGMKHLIGARRECLVPAPTLEEQREARRGYQRNMRPAMTKHTGAPAKPEQRNAKPKAIRS DASAAGRDKSHDKAASAGKPFKGKPQTAKSGANRPSTGTSAGRKASRVAKGK >gi|316917711|gb|ADCU01000022.1| GENE 38 46669 - 47628 644 319 aa, chain + ## HITS:1 COG:YPO3698 KEGG:ns NR:ns ## COG: YPO3698 COG1609 # Protein_GI_number: 16123837 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 311 1 313 317 386 61.0 1e-107 MSNRLTIKDIARLSGVGKSTVSRVINKEPGVKPETRARVEEIINQQNFAPSKSARAMRGQ TDKVVAIIVSRLDSNAENQAVRAMLPMLYAQGYDPILLESQFEPERVQEHLTVLSRRHVD GILLFGFTGLNESMLLPWRDKLVVLAWEYEQLTSVRYDDSGAVTLLMDALLAKHHKNIAF VGVKLSDATTGGRRYKTYQILCQKHQLTSSSALGELTYQSGYQLAQQVICPETTAIICAS DTIALGVSKYLQERSRDDVVVCGMGNNSLLEFLYPQTFSIDLGYAEGGRLAVKQLLTLLH NPESHRHITVPCVLRTPAN >gi|316917711|gb|ADCU01000022.1| GENE 39 47625 - 49343 1100 572 aa, chain - ## HITS:1 COG:YPO3724 KEGG:ns NR:ns ## COG: YPO3724 COG4579 # Protein_GI_number: 16123861 # Func_class: T Signal transduction mechanisms # Function: Isocitrate dehydrogenase kinase/phosphatase # Organism: Yersinia pestis # 1 572 1 572 575 917 77.0 0 MAIGMEQLIAQTILQGFDAQYGRFLEITAGAQQRFEKANWAAIQQAMKKRIHLYDHHVGL VVEQLRRMTGPLCHDAEFLARVKTVYTEMLPEYPRFEIAESFFNSVYCRLFNHRELTPDK LFVFSSQPERHWREFPRPLARTFKPDNGWRFLISDLLTELPLRLPWEDRARDVNYIVGHL ENTFSAETLNCSRLQVANELFYRNKAAWLVGKLHTPEGVYPFLLPIHHNEAGALFVDTCL TRLDEASIVFGFARSYFMVYAPLPAALVDWLREILPGKTTAELYMAIGCQKHGKTEYYRE YLKHLAESKEQFIIAPGIRGMVMLVFTLPSFDRVFKVIKDTFAPQKEVDPARVQACYQLV KEHDRVGRMADTQEYENFVIEKWRISPDLMEELQKEVPEKLEDLGDRIVIRHLYIERRMI PLNIYLEQADERQLHDAIEEYGNAIKQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEIC YMTEVNFRDIPPPRYPEDEMASEPWYSISPNDVFPEEFQHFLCGDARIRRLFAEMHGDLF TANYWRSLQQRINNGMVDDVFAYRRKRRFAQR >gi|316917711|gb|ADCU01000022.1| GENE 40 49466 - 50776 1328 436 aa, chain - ## HITS:1 COG:YPO3725 KEGG:ns NR:ns ## COG: YPO3725 COG2224 # Protein_GI_number: 16123862 # Func_class: C Energy production and conversion # Function: Isocitrate lyase # Organism: Yersinia pestis # 1 436 1 435 435 784 88.0 0 MSTSRNQQIQQLEQDWKTNPRWEGITRPYSANDVVNLRGSVNPECTLAQKGAAKLWELLH GGSRKGYVNCLGALTGGQALQQAKAGVEAIYLSGWQVAADANLASSMYPDQSLYPVNSVP AVVERINNSFRRADQIQWANGIEPGDSKFTDYFLPIVADAEAGFGGVLNAFELMKSMIEA GAGGVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLVIARTDADAA DLITSDCDSYDSAFVTGERTVEGFFRTHAGIEQAISRGLAYAPYADLVWCETSTPDLDAA KRFADAIHAQYPGKLLAYNCSPSFNWKKNLDDQTIARFQDELSAMGYKYQFITLAGIHSM WFNMFDLAHAYANGEGMKHYVEKVQEREFAAQKQGYTFASHQQEVGTGYFDKVTNVIQGG ASSVTALTGSTEEQQF >gi|316917711|gb|ADCU01000022.1| GENE 41 50838 - 52436 1322 532 aa, chain - ## HITS:1 COG:aceB KEGG:ns NR:ns ## COG: aceB COG2225 # Protein_GI_number: 16131840 # Func_class: C Energy production and conversion # Function: Malate synthase # Organism: Escherichia coli K12 # 1 531 1 532 533 915 81.0 0 MTQQAIDTELAFSQRFGSNERQILTDGAVEFLTDLVARFAPQRDKLLAARKVQQQAIDRG ELPDFISETDSIKSSNWKIRGIPSDLQDRRVEITGPVERKMVINALNANVKVFMADFEDS LAPNWDKVIEGQVNLRDAVNGTISFTNEAGKIYQLKPNPAVLIARVRGLHLPEKHVTWQG EPIPGGLFDFALYFFHNYKALLEKGSGPYFYLPKTESYHETAWWSEIFSFTEDRFDLPRG TIKATVLIETLPAVFQMDEILHSLRDHIVGLNCGRWDYIFSYIKTLKNHSDRVLPDRQSV TMEKPFLSAYSRLLIKTCHKRGAFAMGGMAAFIPSKDAERNAWVMDKVRADKELEANNGH DGTWVAHPGLADEVMQVFGRVLGDRQNQLDVTRSQDEPITAQQLLEPCPGERTEEGMRAN IRVAVQYIEAWISGNGCVPIYGLMEDAATAEISRTSIWQWIHHGKTLSNGLQVTPVLFRQ LLKEEMQVIRQELGDARFDSGRFDEAARLMERITTSSELIDFLTLPGYELLN >gi|316917711|gb|ADCU01000022.1| GENE 42 52802 - 53731 705 309 aa, chain - ## HITS:1 COG:YPO3727 KEGG:ns NR:ns ## COG: YPO3727 COG1897 # Protein_GI_number: 16123864 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Yersinia pestis # 1 309 1 309 309 560 85.0 1e-159 MPIRVPDELPAVSFLRNENVFVMPSSRAATQEIRPLKVLVLNLMPKKIETENQFLRLLSN SPLQIDVQLLRIDSRESKNTPAEHLDNFYCNFEDIKDQNFDGLIVTGAPLGLVDFCDVAY WPQIEQIVHWAKEHVTSTLFVCWAVQAALNVLYGLPKLTRETKLSGVYHHQTLQPLALLT RGFDETFLAPHSRYADFPVDVLREYTDLDILAESEQAGAYLFATKDKRMAFVTGHPEYDA HTLSGEYFRDVAAGLTPDVPVNYFPDDNPENSPKASWRSHGHLLFTNWLNYYVYQITPFD LRYMNPTLE >gi|316917711|gb|ADCU01000022.1| GENE 43 53881 - 55182 1001 433 aa, chain - ## HITS:1 COG:STM2654 KEGG:ns NR:ns ## COG: STM2654 COG0477 # Protein_GI_number: 16765974 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 433 1 433 433 602 74.0 1e-172 MADTTPALTGQNSGEQDARKRIFAIVGASSGNLVEWFDFYVYSFCALYFAPVFFPSGDST TQLLQTAGVFAAGFLMRPIGGWVFGYIADKHGRRTSMMISVCMMCCGSLVIACLPTYASI GNWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGKRGFYASFQYVTLIGGQLLALLV LVVLQQTLSTEELRSWGWRVPFVLGALLAVVALYLRRSLHETSSKETRKRKDAGTLSGLW NNKKAFLMVLGFTAGGSLSFYTFTTYMQKYLVNTAGMDAKMASGIMTAALFVFMLLQPIF GGLSDKVGRRNSMIAFGALASLLTVPILTTLQDVTNPYLAFVMIVLALTIVSLYTSIGGL LKAEMFPPEVRALGVGLSYAVGNALFGGSAEYVALSMKAAGIETAFFWYVSGMCFIAMLV SLLLHKKGQEIKM Prediction of potential genes in microbial genomes Time: Wed May 18 15:43:08 2011 Seq name: gi|316917549|gb|ADCU01000023.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.23, whole genome shotgun sequence Length of sequence - 155769 bp Number of predicted genes - 166, with homology - 157 Number of transcription units - 77, operones - 32 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 2 Tu 1 . - CDS 1158 - 1301 72 ## - Prom 1329 - 1388 1.9 3 3 Tu 1 . + CDS 1278 - 1505 71 ## 4 4 Op 1 8/0.000 - CDS 1424 - 2242 617 ## COG0169 Shikimate 5-dehydrogenase 5 4 Op 2 6/0.062 - CDS 2248 - 2817 471 ## COG0009 Putative translation factor (SUA5) 6 4 Op 3 7/0.000 - CDS 2824 - 3366 221 ## COG0551 Zn-finger domain associated with topoisomerase type I 7 4 Op 4 8/0.000 - CDS 3397 - 3870 435 ## COG2922 Uncharacterized protein conserved in bacteria 8 4 Op 5 . - CDS 3842 - 4975 566 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake - Prom 5065 - 5124 2.0 + Prom 4978 - 5037 3.1 9 5 Op 1 26/0.000 + CDS 5077 - 5586 493 ## COG0242 N-formylmethionyl-tRNA deformylase 10 5 Op 2 20/0.000 + CDS 5614 - 6561 657 ## COG0223 Methionyl-tRNA formyltransferase + Term 6577 - 6615 8.6 + Prom 6611 - 6670 4.6 11 6 Op 1 8/0.000 + CDS 6716 - 8008 914 ## COG0144 tRNA and rRNA cytosine-C5-methylases 12 6 Op 2 17/0.000 + CDS 8064 - 9440 1195 ## COG0569 K+ transport systems, NAD-binding component 13 6 Op 3 . + CDS 9512 - 10894 691 ## COG0168 Trk-type K+ transport systems, membrane components 14 6 Op 4 . + CDS 10968 - 11375 423 ## COG1970 Large-conductance mechanosensitive channel + Term 11391 - 11427 6.6 - Term 11377 - 11417 4.5 15 7 Op 1 2/0.438 - CDS 11463 - 11639 184 ## COG3036 Uncharacterized protein conserved in bacteria 16 7 Op 2 . - CDS 11650 - 12111 317 ## COG0789 Predicted transcriptional regulators 17 7 Op 3 . - CDS 12130 - 12489 310 ## Kvar_0410 DnaJ-like protein - Prom 12520 - 12579 4.5 - Term 12581 - 12620 4.1 18 8 Op 1 50/0.000 - CDS 12634 - 13020 628 ## PROTEIN SUPPORTED gi|238921418|ref|YP_002934933.1| 50S ribosomal protein L17, putative 19 8 Op 2 26/0.000 - CDS 13061 - 14050 1039 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 20 8 Op 3 36/0.000 - CDS 14076 - 14696 1019 ## PROTEIN SUPPORTED gi|238921420|ref|YP_002934935.1| 30S ribosomal protein S4 (BS4) 21 8 Op 4 48/0.000 - CDS 14727 - 15116 667 ## PROTEIN SUPPORTED gi|37528521|ref|NP_931866.1| 30S ribosomal protein S11 22 8 Op 5 . - CDS 15133 - 15489 571 ## PROTEIN SUPPORTED gi|197287090|ref|YP_002152962.1| 30S ribosomal protein S13 - Prom 15535 - 15594 4.9 - Term 15565 - 15606 8.2 23 9 Op 1 . - CDS 15636 - 15752 194 ## PROTEIN SUPPORTED gi|45440088|ref|NP_991627.1| 50S ribosomal protein L36 24 9 Op 2 53/0.000 - CDS 15786 - 17117 1254 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 25 9 Op 3 48/0.000 - CDS 17125 - 17559 704 ## PROTEIN SUPPORTED gi|238921423|ref|YP_002934938.1| 50S ribosomal protein L15, putative 26 9 Op 4 50/0.000 - CDS 17563 - 17742 292 ## PROTEIN SUPPORTED gi|50122933|ref|YP_052100.1| 50S ribosomal protein L30 27 9 Op 5 56/0.000 - CDS 17749 - 18249 818 ## PROTEIN SUPPORTED gi|50122934|ref|YP_052101.1| 30S ribosomal protein S5 28 9 Op 6 46/0.000 - CDS 18264 - 18617 552 ## PROTEIN SUPPORTED gi|16762859|ref|NP_458476.1| 50S ribosomal protein L18 29 9 Op 7 55/0.000 - CDS 18627 - 19160 850 ## PROTEIN SUPPORTED gi|157372761|ref|YP_001480750.1| 50S ribosomal protein L6 30 9 Op 8 50/0.000 - CDS 19174 - 19566 634 ## PROTEIN SUPPORTED gi|22127873|ref|NP_671296.1| 30S ribosomal protein S8 31 9 Op 9 50/0.000 - CDS 19600 - 19905 495 ## PROTEIN SUPPORTED gi|85060243|ref|YP_455945.1| 30S ribosomal protein S14 32 9 Op 10 48/0.000 - CDS 19919 - 20458 895 ## PROTEIN SUPPORTED gi|1173052|sp|P46178|RL5_BUCAK RecName: Full=50S ribosomal protein L5 gi|632227|pir||JC2278 ribosomal protein L5 - pea aphid symbiont bacterium gi|710617|dbj|BAA06587.1| ribosomal protein L5 33 9 Op 11 57/0.000 - CDS 20473 - 20787 514 ## PROTEIN SUPPORTED gi|157148885|ref|YP_001456204.1| 50S ribosomal protein L24 34 9 Op 12 50/0.000 - CDS 20798 - 21169 619 ## PROTEIN SUPPORTED gi|16762853|ref|NP_458470.1| 50S ribosomal protein L14 - Prom 21241 - 21300 6.5 - Term 21271 - 21310 8.1 35 10 Op 1 50/0.000 - CDS 21334 - 21588 413 ## PROTEIN SUPPORTED gi|15803838|ref|NP_289872.1| 30S ribosomal protein S17 36 10 Op 2 50/0.000 - CDS 21588 - 21779 291 ## PROTEIN SUPPORTED gi|16762851|ref|NP_458468.1| 50S ribosomal protein L29 37 10 Op 3 50/0.000 - CDS 21779 - 22189 695 ## PROTEIN SUPPORTED gi|188535271|ref|YP_001909068.1| 50S ribosomal protein L16 38 10 Op 4 61/0.000 - CDS 22203 - 22904 1179 ## PROTEIN SUPPORTED gi|15833433|ref|NP_312206.1| 30S ribosomal protein S3 39 10 Op 5 59/0.000 - CDS 22922 - 23254 538 ## PROTEIN SUPPORTED gi|123444093|ref|YP_001008063.1| 50S ribosomal protein L22 40 10 Op 6 60/0.000 - CDS 23269 - 23547 479 ## PROTEIN SUPPORTED gi|37528539|ref|NP_931884.1| 30S ribosomal protein S19 41 10 Op 7 61/0.000 - CDS 23562 - 24386 1416 ## PROTEIN SUPPORTED gi|22127863|ref|NP_671286.1| 50S ribosomal protein L2 42 10 Op 8 61/0.000 - CDS 24406 - 24708 464 ## PROTEIN SUPPORTED gi|156932234|ref|YP_001436151.1| 50S ribosomal protein L23 43 10 Op 9 58/0.000 - CDS 24705 - 25310 978 ## PROTEIN SUPPORTED gi|157372775|ref|YP_001480764.1| 50S ribosomal protein L4 44 10 Op 10 40/0.000 - CDS 25321 - 25950 1016 ## PROTEIN SUPPORTED gi|227328949|ref|ZP_03832973.1| 50S ribosomal protein L3 45 10 Op 11 . - CDS 25983 - 26294 514 ## PROTEIN SUPPORTED gi|15603281|ref|NP_246355.1| 30S ribosomal protein S10 46 11 Tu 1 . + CDS 26708 - 27421 174 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 47 12 Op 1 9/0.000 - CDS 27426 - 27902 522 ## COG2193 Bacterioferritin (cytochrome b1) 48 12 Op 2 2/0.438 - CDS 27975 - 28172 74 ## COG2906 Bacterioferritin-associated ferredoxin - Prom 28196 - 28255 5.3 - Term 28269 - 28304 5.8 49 13 Op 1 30/0.000 - CDS 28330 - 29514 1656 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 50 13 Op 2 51/0.000 - CDS 29585 - 31699 1946 ## COG0480 Translation elongation factors (GTPases) - Prom 31724 - 31783 2.2 51 13 Op 3 56/0.000 - CDS 31793 - 32263 765 ## PROTEIN SUPPORTED gi|227112096|ref|ZP_03825752.1| 30S ribosomal protein S7 52 13 Op 4 7/0.000 - CDS 32360 - 32734 646 ## PROTEIN SUPPORTED gi|22127853|ref|NP_671276.1| 30S ribosomal protein S12 - Prom 32816 - 32875 5.5 - Term 32776 - 32812 -0.9 53 13 Op 5 10/0.000 - CDS 32877 - 33164 123 ## COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur 54 13 Op 6 13/0.000 - CDS 33183 - 33542 316 ## COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur 55 13 Op 7 6/0.062 - CDS 33552 - 33941 348 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction 56 13 Op 8 6/0.062 - CDS 33941 - 34663 600 ## COG2964 Uncharacterized protein conserved in bacteria - Prom 34738 - 34797 5.0 - Term 34811 - 34854 11.0 57 14 Tu 1 . - CDS 34871 - 35689 892 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Prom 35880 - 35939 4.2 + Prom 35839 - 35898 3.7 58 15 Tu 1 . + CDS 35962 - 36195 230 ## COG2900 Uncharacterized protein conserved in bacteria + Term 36211 - 36254 3.3 - Term 36204 - 36241 1.7 59 16 Tu 1 . - CDS 36265 - 36861 540 ## COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 - Prom 36890 - 36949 4.2 60 17 Op 1 3/0.312 - CDS 36969 - 37163 125 ## COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 61 17 Op 2 7/0.000 - CDS 37190 - 39004 1061 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 62 17 Op 3 . - CDS 39001 - 39555 430 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 39669 - 39728 3.7 + Prom 39617 - 39676 5.0 63 18 Tu 1 . + CDS 39707 - 41635 1859 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 64 19 Op 1 5/0.188 - CDS 41714 - 42562 676 ## COG2175 Probable taurine catabolism dioxygenase 65 19 Op 2 7/0.000 - CDS 42559 - 43407 637 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 66 19 Op 3 6/0.062 - CDS 43404 - 44186 760 ## COG4525 ABC-type taurine transport system, ATPase component 67 19 Op 4 1/0.531 - CDS 44197 - 45195 1059 ## COG4521 ABC-type taurine transport system, periplasmic component - Prom 45283 - 45342 3.0 - Term 45365 - 45406 4.2 68 20 Tu 1 . - CDS 45410 - 46015 551 ## COG1280 Putative threonine efflux protein - Prom 46096 - 46155 2.9 69 21 Op 1 5/0.188 + CDS 46138 - 47097 777 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold 70 21 Op 2 . + CDS 47094 - 47330 316 ## COG3089 Uncharacterized protein conserved in bacteria + Prom 47337 - 47396 2.8 71 22 Op 1 . + CDS 47438 - 49285 934 ## XCC2749 hypothetical protein 72 22 Op 2 . + CDS 49321 - 50190 794 ## COG3954 Phosphoribulokinase + Term 50364 - 50393 -0.2 - Term 50196 - 50241 4.2 73 23 Tu 1 . - CDS 50256 - 50663 303 ## COG1765 Predicted redox protein, regulator of disulfide bond formation 74 24 Op 1 4/0.312 + CDS 50993 - 51625 682 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 51636 - 51668 4.7 75 24 Op 2 . + CDS 51669 - 53747 1091 ## COG1289 Predicted membrane protein + Prom 53791 - 53850 4.7 76 25 Tu 1 . + CDS 53906 - 54178 102 ## + Term 54383 - 54414 -0.9 77 26 Tu 1 . - CDS 54235 - 55458 1110 ## COG4992 Ornithine/acetylornithine aminotransferase - Prom 55510 - 55569 7.1 + Prom 55466 - 55525 6.3 78 27 Op 1 1/0.531 + CDS 55681 - 57210 1448 ## COG0433 Predicted ATPase + Prom 57214 - 57273 2.5 79 27 Op 2 . + CDS 57307 - 57888 469 ## COG0512 Anthranilate/para-aminobenzoate synthases component II - Term 57877 - 57912 0.2 80 28 Tu 1 . - CDS 58055 - 58621 525 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Prom 58746 - 58805 4.7 81 29 Op 1 10/0.000 + CDS 58960 - 59265 359 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 82 29 Op 2 13/0.000 + CDS 59329 - 60654 1174 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 83 29 Op 3 2/0.438 + CDS 60684 - 61028 338 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 84 29 Op 4 2/0.438 + CDS 61025 - 62332 1401 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 85 30 Tu 1 . + CDS 62566 - 63549 585 ## COG1609 Transcriptional regulators + Prom 63609 - 63668 3.2 86 31 Tu 1 . + CDS 63749 - 64933 1177 ## COG0477 Permeases of the major facilitator superfamily + Term 64958 - 64989 2.4 - Term 64946 - 64977 2.4 87 32 Op 1 6/0.062 - CDS 65002 - 66285 1122 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 88 32 Op 2 . - CDS 66275 - 67546 1177 ## COG1457 Purine-cytosine permease and related proteins - Prom 67583 - 67642 4.5 + Prom 67641 - 67700 5.7 89 33 Op 1 14/0.000 + CDS 67930 - 70482 2561 ## COG1251 NAD(P)H-nitrite reductase 90 33 Op 2 3/0.312 + CDS 70479 - 70814 369 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases + Prom 70956 - 71015 1.9 91 34 Op 1 3/0.312 + CDS 71103 - 71918 720 ## COG2116 Formate/nitrite family of transporters + Term 71929 - 71962 6.1 92 34 Op 2 . + CDS 71989 - 73371 1352 ## COG0007 Uroporphyrinogen-III methylase + Prom 73591 - 73650 7.8 93 35 Tu 1 . + CDS 73858 - 74037 213 ## SFV_3375 hypothetical protein - Term 74259 - 74292 2.9 94 36 Op 1 6/0.062 - CDS 74315 - 75319 1075 ## COG0180 Tryptophanyl-tRNA synthetase 95 36 Op 2 9/0.000 - CDS 75339 - 76055 448 ## COG0546 Predicted phosphatases 96 36 Op 3 6/0.062 - CDS 76057 - 76740 669 ## COG0036 Pentose-5-phosphate-3-epimerase 97 36 Op 4 6/0.062 - CDS 76780 - 77592 405 ## COG0338 Site-specific DNA methylase - Prom 77623 - 77682 2.2 - Term 77676 - 77711 5.8 98 37 Op 1 7/0.000 - CDS 77738 - 78835 681 ## COG3266 Uncharacterized protein conserved in bacteria 99 37 Op 2 20/0.000 - CDS 78917 - 80002 870 ## COG0337 3-dehydroquinate synthetase 100 37 Op 3 8/0.000 - CDS 80044 - 80562 581 ## COG0703 Shikimate kinase - Prom 80668 - 80727 3.9 101 37 Op 4 . - CDS 80885 - 82198 493 ## COG4796 Type II secretory pathway, component HofQ 102 37 Op 5 . - CDS 82113 - 82304 104 ## - Prom 82430 - 82489 2.1 - Term 82324 - 82365 1.1 103 38 Op 1 . - CDS 82551 - 83066 311 ## 104 38 Op 2 . - CDS 83053 - 83625 310 ## 105 38 Op 3 . - CDS 83613 - 84455 426 ## HDEF_2260 PilM-like ATPase type IV pilus biogenesis protein - Prom 84562 - 84621 2.5 + Prom 84471 - 84530 2.5 106 39 Tu 1 . + CDS 84576 - 87146 2160 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein + Term 87177 - 87216 4.4 - Term 87165 - 87202 3.1 107 40 Op 1 . - CDS 87225 - 87791 637 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 108 40 Op 2 . - CDS 87724 - 87936 66 ## - Prom 88150 - 88209 3.6 + Prom 88131 - 88190 8.5 109 41 Op 1 . + CDS 88246 - 90360 1066 ## ETAE_3269 hypothetical protein + Term 90410 - 90438 1.0 110 41 Op 2 4/0.312 + CDS 90456 - 91148 587 ## COG1011 Predicted hydrolase (HAD superfamily) 111 41 Op 3 3/0.312 + CDS 91211 - 91627 424 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 112 41 Op 4 3/0.312 + CDS 91713 - 92594 897 ## COG1281 Disulfide bond chaperones of the HSP33 family + Prom 92663 - 92722 3.0 113 42 Tu 1 . + CDS 92853 - 94472 1590 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) + Term 94495 - 94523 1.0 - Term 94408 - 94445 3.0 114 43 Op 1 40/0.000 - CDS 94543 - 95931 1011 ## COG0642 Signal transduction histidine kinase 115 43 Op 2 . - CDS 95928 - 96647 924 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 96768 - 96827 6.3 + Prom 96764 - 96823 5.4 116 44 Tu 1 1/0.531 + CDS 97060 - 97536 446 ## COG0782 Transcription elongation factor + Prom 97551 - 97610 4.4 117 45 Tu 1 4/0.312 + CDS 97641 - 99977 2442 ## COG2183 Transcriptional accessory protein + Term 100146 - 100191 -0.9 + Prom 100504 - 100563 4.9 118 46 Op 1 22/0.000 + CDS 100665 - 100949 203 ## COG1918 Fe2+ transport system protein A + Term 100964 - 101004 4.0 119 46 Op 2 . + CDS 101063 - 103378 1754 ## COG0370 Fe2+ transport system protein B 120 46 Op 3 . + CDS 103417 - 103665 246 ## ETAE_3285 hypothetical protein - Term 103758 - 103796 8.9 121 47 Tu 1 . - CDS 103863 - 104633 555 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Prom 104591 - 104650 2.0 122 48 Op 1 5/0.188 + CDS 104678 - 105361 -2 ## COG1040 Predicted amidophosphoribosyltransferases 123 48 Op 2 . + CDS 105420 - 105995 791 ## COG0694 Thioredoxin-like proteins and domains + Term 106022 - 106072 3.4 - Term 105934 - 105974 -0.5 124 49 Tu 1 . - CDS 106075 - 106830 591 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 106857 - 106916 5.2 - Term 106905 - 106946 3.0 125 50 Tu 1 . - CDS 106967 - 108031 980 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 108240 - 108299 10.4 + Prom 108248 - 108307 10.0 126 51 Op 1 11/0.000 + CDS 108474 - 109874 1413 ## COG3037 Uncharacterized protein conserved in bacteria 127 51 Op 2 13/0.000 + CDS 109893 - 110198 341 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 128 51 Op 3 8/0.000 + CDS 110210 - 110677 537 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) + Prom 110680 - 110739 1.7 129 51 Op 4 9/0.000 + CDS 110799 - 111455 653 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 130 51 Op 5 8/0.000 + CDS 111466 - 112326 834 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 131 51 Op 6 . + CDS 112326 - 113012 564 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 132 51 Op 7 . + CDS 113040 - 113603 469 ## COG3477 Predicted periplasmic/secreted protein + Term 113738 - 113780 -0.1 - Term 113639 - 113669 -0.2 133 52 Op 1 5/0.188 - CDS 113685 - 114488 739 ## COG0561 Predicted hydrolases of the HAD superfamily 134 52 Op 2 . - CDS 114505 - 115530 819 ## COG2267 Lysophospholipase - Prom 115646 - 115705 1.8 135 53 Tu 1 . - CDS 115707 - 115952 79 ## - Prom 116025 - 116084 2.8 + Prom 115686 - 115745 4.9 136 54 Tu 1 . + CDS 115833 - 116936 1112 ## COG0136 Aspartate-semialdehyde dehydrogenase + Term 116942 - 116980 5.6 137 55 Tu 1 . - CDS 116988 - 118682 1490 ## COG3275 Putative regulator of cell autolysis - Prom 118719 - 118778 7.1 + Prom 119049 - 119108 9.1 138 56 Tu 1 . + CDS 119159 - 119662 385 ## PROTEIN SUPPORTED gi|229877854|ref|ZP_04497362.1| acetyltransferase, ribosomal protein N-acetylase 139 57 Tu 1 . - CDS 119642 - 120280 170 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 120320 - 120379 6.1 + Prom 120858 - 120917 4.1 140 58 Tu 1 . + CDS 121003 - 121587 408 ## ECL_02072 hypothetical protein 141 59 Op 1 . - CDS 121653 - 122363 301 ## COG3121 P pilus assembly protein, chaperone PapD 142 59 Op 2 . - CDS 122335 - 123642 934 ## YE0158 hypothetical protein 143 59 Op 3 10/0.000 - CDS 123653 - 126232 1625 ## COG3188 P pilus assembly protein, porin PapC 144 59 Op 4 7/0.000 - CDS 126273 - 126986 141 ## COG3121 P pilus assembly protein, chaperone PapD - Term 126996 - 127029 6.1 145 59 Op 5 . - CDS 127035 - 127574 468 ## COG3539 P pilus assembly protein, pilin FimA - Prom 127750 - 127809 5.4 + Prom 128846 - 128905 3.5 146 60 Tu 1 . + CDS 128993 - 131701 2368 ## COG0474 Cation transport ATPase + Term 131727 - 131760 4.5 + Prom 131712 - 131771 2.0 147 61 Tu 1 . + CDS 131906 - 132481 674 ## ROP_53400 hypothetical protein - Term 132248 - 132278 -0.9 148 62 Tu 1 . - CDS 132528 - 133724 1028 ## COG2081 Predicted flavoproteins - Prom 133906 - 133965 4.3 + Prom 133925 - 133984 3.9 149 63 Tu 1 . + CDS 134048 - 135541 1382 ## COG0306 Phosphate/sulphate permeases + Term 135564 - 135596 4.0 - Term 135550 - 135582 4.0 150 64 Tu 1 . - CDS 135594 - 136907 1030 ## COG0733 Na+-dependent transporters of the SNF family - Prom 137120 - 137179 4.2 151 65 Tu 1 . - CDS 137272 - 137607 344 ## ETAE_3349 universal stress protein 152 66 Tu 1 . + CDS 138331 - 138768 540 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 138807 - 138837 4.1 153 67 Tu 1 . - CDS 138973 - 139173 147 ## - Prom 139289 - 139348 3.8 + Prom 139695 - 139754 5.7 154 68 Tu 1 . + CDS 139838 - 141316 1500 ## COG3104 Dipeptide/tripeptide permease + Term 141339 - 141369 3.0 + Prom 141401 - 141460 4.3 155 69 Tu 1 . + CDS 141500 - 142843 1364 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 142871 - 142911 4.1 - Term 142861 - 142895 4.3 156 70 Tu 1 . - CDS 142909 - 144081 1053 ## COG1680 Beta-lactamase class C and other penicillin binding proteins - Prom 144143 - 144202 3.8 + Prom 144048 - 144107 4.1 157 71 Tu 1 . + CDS 144296 - 145162 431 ## COG0583 Transcriptional regulator + Prom 145208 - 145267 3.7 158 72 Tu 1 . + CDS 145471 - 146823 515 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 146846 - 146884 4.1 - Term 146734 - 146775 -0.9 159 73 Op 1 . - CDS 146888 - 147538 480 ## COG2095 Multiple antibiotic transporter 160 73 Op 2 4/0.312 - CDS 147540 - 148847 831 ## COG0531 Amino acid transporters 161 73 Op 3 4/0.312 - CDS 148847 - 149785 798 ## COG2066 Glutaminase - Prom 149849 - 149908 2.2 162 74 Op 1 7/0.000 - CDS 149995 - 151584 1182 ## COG0531 Amino acid transporters 163 74 Op 2 . - CDS 151698 - 153098 1353 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins - Prom 153346 - 153405 7.5 + Prom 153204 - 153263 7.0 164 75 Tu 1 . + CDS 153411 - 153728 317 ## ECS88_3922 acid-resistance protein + Prom 153800 - 153859 3.2 165 76 Tu 1 . + CDS 153953 - 155203 856 ## COG0004 Ammonia permease + Prom 155219 - 155278 7.7 166 77 Tu 1 . + CDS 155384 - 155707 396 ## ETAE_2870 acid-resistance protein Predicted protein(s) >gi|316917549|gb|ADCU01000023.1| GENE 1 637 - 1203 375 188 aa, chain + ## HITS:1 COG:ECs4145 KEGG:ns NR:ns ## COG: ECs4145 COG0663 # Protein_GI_number: 15833399 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli O157:H7 # 1 178 73 250 256 273 71.0 2e-73 MSLSVRPYLSLHPKIANRVFIDPTSTIIGAVDLADDVSIWPLVAIRGDVNYISIGARSNI QDGTVIHVTHKSENTPEGLPTIIGEDVTVGHKAMLHGCTIGNRVLVGMGSIILDGAIIED DVIIGAGSLVSPGKRLVSGYMYFGSPARQIRPLSEEEKMGLLYSANNYVRWKDDYLSQPE IHIQPSSL >gi|316917549|gb|ADCU01000023.1| GENE 2 1158 - 1301 72 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVEDPVNHDPLALFRSLRWDLEDLAEQKILNEDYNDDGWIWISGCER >gi|316917549|gb|ADCU01000023.1| GENE 3 1278 - 1505 71 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIHRILYHSFKLVYIDSAAYLKTIARCGKEDSSLLRIPFFLVWKLYRLVHRDDSSRMTLS TDAISGITPFHSKNA >gi|316917549|gb|ADCU01000023.1| GENE 4 1424 - 2242 617 272 aa, chain - ## HITS:1 COG:YPO0246 KEGG:ns NR:ns ## COG: YPO0246 COG0169 # Protein_GI_number: 16120585 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Yersinia pestis # 2 269 3 270 273 357 64.0 9e-99 MKQFAVFGNPIKHSKSPRIHQLFSQQTGIALNYETRLAPVDDFSKSIHAFFAGGGIGANI TTPFKEQAYELSDELTERASLAGAVNTLKLLDDGRLLGDNTDGIGLLSDLERLGMIAPEA TVLLLGAGGAARGVIQPLLSLDCDLTIANRTYSRAEELAKVFSHLGNIDAAEFNELSGRR FDLIINATASGIHGEIPQISTEVIDENTACYDMFYQKGLTPFLSWAKQHDANQIADGFGM LVGQAAHAFLLWNGVMPEIASVLNVMREESSR >gi|316917549|gb|ADCU01000023.1| GENE 5 2248 - 2817 471 189 aa, chain - ## HITS:1 COG:yrdC KEGG:ns NR:ns ## COG: yrdC COG0009 # Protein_GI_number: 16131163 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Escherichia coli K12 # 5 189 6 190 190 270 70.0 2e-72 MKKEQESSLANVLNALKNEKVVAYPTEAVFGLGCDPDSELAVHALLDLKQRQWEKGLILI AANYEQLQPYVDDAKLSGERREEVFSYWPGPVTWVMPAKPTTPQWLRGRFSTIAVRVSDH PLVQTLCLQFGKPLVSTSANLSGLEPCRTAQEVRLQFGNAFPVVDAEVGGRLNPSEIRDA LTGELFRQG >gi|316917549|gb|ADCU01000023.1| GENE 6 2824 - 3366 221 180 aa, chain - ## HITS:1 COG:STM3403 KEGG:ns NR:ns ## COG: STM3403 COG0551 # Protein_GI_number: 16766692 # Func_class: L Replication, recombination and repair # Function: Zn-finger domain associated with topoisomerase type I # Organism: Salmonella typhimurium LT2 # 1 180 1 180 180 271 73.0 3e-73 MSQATLLAVKNTENCPDCGAELVIRSGKHGPFLGCSRYPECQFIRPLKPQADGHVVKILD GQLCPKCGSTLVLRQGRYGMFIGCSEYPECDHTEVIDKPDTTSIICPQCQQGKLLQRKSR YGKVFHACDRYPECQFAINLKPVEGECSYCHYPLLIEKRTAQGIKLFCASKLCGKAVVTE >gi|316917549|gb|ADCU01000023.1| GENE 7 3397 - 3870 435 157 aa, chain - ## HITS:1 COG:ECs4150 KEGG:ns NR:ns ## COG: ECs4150 COG2922 # Protein_GI_number: 15833404 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 204 73.0 4e-53 MFDVLMYLFETYIHTASGMQVDQDKLTDDLTRAGFEREDIYSALGWLEKLAMMQEADALP YISCADPHVMRIYTDEEMIRLDSACRGFLLFLEQIQVLTPETREMVIDRVMALDADQFDL EDLKWVVLMVLFNVPGHEHAYEQMEELLFEVNEGYLH >gi|316917549|gb|ADCU01000023.1| GENE 8 3842 - 4975 566 377 aa, chain - ## HITS:1 COG:Zsmf KEGG:ns NR:ns ## COG: Zsmf COG0758 # Protein_GI_number: 15803813 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Escherichia coli O157:H7 EDL933 # 13 377 5 374 374 351 52.0 1e-96 MQAAQGTDMHAQETWLRLSRLQKIALPQCIHIVKRFANETPNILLLRKLGLTSAQAQKFL SSEHLEVDLSWLAQQGNYLIAYDDSRYPEKLKNIANPPAVLFVKGNVECLSQAQIAVVGS RRYSDYGETCATYFAGELAASGLVITSGLALGIDGIAHRACLESLGTTIAVLGCGIAQLY PTCHEHLAARIVENNGAIISEFPPSTRARSEYFPRRNRIISGLSDGVLIIEAAEKSGSLN TARCAIEQGKDVFAIPGSIDSLQSAGANWLIQQGAYLVAHPNDIIEQLGGLHWLPNPHVE IIYPERDDVELPFADVLANVEYEVTSVDVVAERVGQPVPEVVVALLDLELAGWIKAVSGG YVRLKRASHVRRINVPV >gi|316917549|gb|ADCU01000023.1| GENE 9 5077 - 5586 493 169 aa, chain + ## HITS:1 COG:YPO0242 KEGG:ns NR:ns ## COG: YPO0242 COG0242 # Protein_GI_number: 16120580 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Yersinia pestis # 1 169 1 169 170 271 86.0 4e-73 MAVLQVLHFPDERLRTVAQPVKEVTPEIQRIVDDMFDTMYAEEGIGLAATQVDVHQRIIV IDVSENRDQRLVLINPELLSSDGETGIEEGCLSVPEHRALVPRAERVKIRALDRDGKPFE LEADDLLAICIQHEMDHLIGKLFVDYLSPLKRQRIRQKLEKLYKQQARG >gi|316917549|gb|ADCU01000023.1| GENE 10 5614 - 6561 657 315 aa, chain + ## HITS:1 COG:ECs4153 KEGG:ns NR:ns ## COG: ECs4153 COG0223 # Protein_GI_number: 15833407 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Escherichia coli O157:H7 # 1 314 1 314 315 508 79.0 1e-144 MSDSLRIIFAGTPDFAARHLDALLSSQHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQHN LPVFQPVSLRPEDNQKLVSDLNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRG AAPIQRALWAGDAETGVTIMQMDVGLDTGDMLHKVSCPITAQDTSATLYDKLAEMGPQGL LATLAELANGTATPEKQDEALVTYAEKLSKEEARLNWTLSAAQLERCVRAFNPWPVSFFM IDGQPVKVWQSQAIAAEQNQAPGTIISADKHGIAVATAEGALLMTQLQPSGKKSMSAQDL LNSRREWFIPGNCLE >gi|316917549|gb|ADCU01000023.1| GENE 11 6716 - 8008 914 430 aa, chain + ## HITS:1 COG:YPO0240 KEGG:ns NR:ns ## COG: YPO0240 COG0144 # Protein_GI_number: 16120578 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Yersinia pestis # 1 429 1 428 429 665 77.0 0 MKNTPYNLRAIAAKALGSVLDQGQSLSTVLPALSKEVSEKDRALLQELCFGVLRVLPQLE WYIQQLMAKVLTGKQRPLHYLIMVGIYQLVYTRIPPHAALAETVNGAVALKRPQLKGLIN GVLRQFQRQEDQLKERAQNNECRFLHPSWLLKRLQQAYPQQWESIVDANNQRPPMWLRVN RLHHSRDEYLALLAKAEINAFAHPQFPDAICLEEASPVGRLPGFEQGWVTVQDASAQHCV DLLDPQNGEQILDLCCAPGGKTTHILEAAPKAHVLAVDVDENRLRRVKENLHRLQQQAEV KCGDGRYPEKWCGDKQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAALQKEIIEA IWPHLKSGGVMVYATCSVLPEENAQQMREFLSRHPEAQLMITGDQKNPGQQHLPHAQDGD GFFYAKLIKA >gi|316917549|gb|ADCU01000023.1| GENE 12 8064 - 9440 1195 458 aa, chain + ## HITS:1 COG:YPO0239 KEGG:ns NR:ns ## COG: YPO0239 COG0569 # Protein_GI_number: 16120577 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Yersinia pestis # 1 458 1 458 458 805 91.0 0 MKIIILGAGQVGGTLAENLVGENNDITIVDTNSDRLRQLQDKFDLRVVQGHGSHPRVLRE AGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSTEYIRENERLFNAEAVPID HLISPEQLVTDYVYRLIEYPGALQVVNFAEGKVSLAVVKAYYGGPLVGNALASLKEHMPH IDTRVAAIFRQDRPIRPQGSTIIEAGDEVFFVAASQHIRAVMSELQRLEKPYKRIMIVGG GNVGAGLAHRLEKDYSVKLIERNQQRAAELAEMLHDTIVFYGDASDQELLTEEHIDQVDV FIALTNDDEANIMSAMLAKRLGAKKVMVLIQRSAYVDLVQGSVIDIAISPQQATISALLG HVRKADIVSVSSLRRGVAEAIEAIAHGDESTSKVVGRKVEEIKLPPGTTIGAIVRGDDVI IANSESKIEQGDHVIMFLTDKKFITDVERLFQPSPFFL >gi|316917549|gb|ADCU01000023.1| GENE 13 9512 - 10894 691 460 aa, chain + ## HITS:1 COG:VC0042 KEGG:ns NR:ns ## COG: VC0042 COG0168 # Protein_GI_number: 15640074 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Vibrio cholerae # 1 459 22 480 481 521 57.0 1e-147 MYIPTIYALFTGSGGVSEFLQSVIITHVIAIILIAQGRGQKFYLRIRDMFLTTTLAWITA CCFGALPFVFIKHIAFTDAFFETMSGLTTTGSSVLSHLNQMEPSVLLWRSLLQWMGGVGF IVMAVAILPFLDVGGMRLFHTESSDWSEKSSPRMKDVAKSIMGVYVVLTFLCYFGFRYAG MDNFDAVNHAFATISTGGFSTNDLSMAAYSKLAQWNATLFMFLGSLPFLLFVQCIRQRSG KPLWRDQQLVGFTRFVIIVGMIITLWLWHKNIFSFTDSLRIAFFNLINILSTTGYSLGNF DLWTPLTTVIFASVMLLGGCSGSTAGGIKMFRIQICFETLHIEVRKLIHPNAIFPRRYNN RPITNEVSRSVIAFMMAFIGITIVIAGILGMSGVDTLSAITGAMTAMANVGPGMGPVIGP SGNFASLPDIAKWALSIGMLLGRLEVMTVIVLMFPAFWRT >gi|316917549|gb|ADCU01000023.1| GENE 14 10968 - 11375 423 135 aa, chain + ## HITS:1 COG:YPO0238 KEGG:ns NR:ns ## COG: YPO0238 COG1970 # Protein_GI_number: 16120576 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Yersinia pestis # 1 134 1 135 137 209 83.0 1e-54 MSLLKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPPLGLLIGGVDFKQFHWV IRAAEGATPAVVMNYGQFIQNIFDFVIVAFAIFLAIKLMNKMRRQEAEEPAAPPAPTTEE KLLTEIRDLLKQQQK >gi|316917549|gb|ADCU01000023.1| GENE 15 11463 - 11639 184 58 aa, chain - ## HITS:1 COG:STM3411 KEGG:ns NR:ns ## COG: STM3411 COG3036 # Protein_GI_number: 16766700 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 56 1 56 89 82 73.0 2e-16 MTKYQHTKGIITDNAIQALLHDPLFKPRVEKNSKGKGSYTRKAKHGKKGSWEAVGKIH >gi|316917549|gb|ADCU01000023.1| GENE 16 11650 - 12111 317 153 aa, chain - ## HITS:1 COG:YPO0236 KEGG:ns NR:ns ## COG: YPO0236 COG0789 # Protein_GI_number: 16120574 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 1 141 1 141 141 213 77.0 1e-55 MYRIGQLAKLAGVTPDTVRYYEKQKMMDHEVRTEGGYRLYTDHDLQRLRFIRYAKQLGFT LESIRELLSIRVDPKHHTCQESKSIVDARLLEVESKIHELELMRQSLRRLSDACCGKAHT STYCSILEALEQGAAERLMRIDLRGYYPKPSYC >gi|316917549|gb|ADCU01000023.1| GENE 17 12130 - 12489 310 119 aa, chain - ## HITS:1 COG:no KEGG:Kvar_0410 NR:ns ## KEGG: Kvar_0410 # Name: not_defined # Def: DnaJ-like protein # Organism: K.variicola # Pathway: not_defined # 1 118 1 118 122 152 64.0 5e-36 MFLVDEWAERHINAALKRGELNNLSGEGKPLVLDDDSHVPAELRAGYLLLKNAGCLPPEI EQRNEAATIASILRGLSREHPDYSELNKKLALLEFRLRQAGMSTDFLHAEYVEHFAQRF >gi|316917549|gb|ADCU01000023.1| GENE 18 12634 - 13020 628 128 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238921418|ref|YP_002934933.1| 50S ribosomal protein L17, putative [Edwardsiella ictaluri 93-146] # 1 128 1 128 128 246 97 5e-64 MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSV ANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSV SDAEATAE >gi|316917549|gb|ADCU01000023.1| GENE 19 13061 - 14050 1039 329 aa, chain - ## HITS:1 COG:YPO0234 KEGG:ns NR:ns ## COG: YPO0234 COG0202 # Protein_GI_number: 16120572 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Yersinia pestis # 1 329 1 329 329 609 98.0 1e-174 MQGSVTEFLKPRLVDIEQLSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVQGKDEVILTLNKSGIGPVTAADITHDGD VEIVKPQHVICHLTDENASISMRIKIQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEESIRRAATILAEQLEAFVDLRDVRQP EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL TEIKDVLASRGLSLGMRLENWPPASIADE >gi|316917549|gb|ADCU01000023.1| GENE 20 14076 - 14696 1019 206 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238921420|ref|YP_002934935.1| 30S ribosomal protein S4 (BS4) [Edwardsiella ictaluri 93-146] # 1 206 1 206 206 397 98 1e-109 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQK VRRIYGVLERQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLVSH KAVVVNGRVVNIASYQVSPNDVVSVREKAKKQSRVKAALELAEQREKPTWLEVDAAKMEG VFKRNPERSDLSADINEHLIVELYSK >gi|316917549|gb|ADCU01000023.1| GENE 21 14727 - 15116 667 129 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|37528521|ref|NP_931866.1| 30S ribosomal protein S11 [Photorhabdus luminescens subsp. laumondii TTO1] # 1 129 1 129 129 261 99 1e-68 MAKAPIRARKRVRKQVSDGVAHVHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP FAAQVAAERCAEAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG CRPPKKRRV >gi|316917549|gb|ADCU01000023.1| GENE 22 15133 - 15489 571 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|197287090|ref|YP_002152962.1| 30S ribosomal protein S13 [Proteus mirabilis HI4320] # 1 118 1 118 118 224 95 2e-57 MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICEATGIAENVKISELSEEQIDKLRDEV AKYTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK >gi|316917549|gb|ADCU01000023.1| GENE 23 15636 - 15752 194 38 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|45440088|ref|NP_991627.1| 50S ribosomal protein L36 [Yersinia pestis biovar Microtus str. 91001] # 1 38 1 38 38 79 97 1e-13 MKVRASVKKLCRNCKIVKRNGVVRVICSVEPKHKQRQG >gi|316917549|gb|ADCU01000023.1| GENE 24 15786 - 17117 1254 443 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 12 440 16 444 447 487 56 1e-136 MAKQPGLDYQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTI IEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPALAEIKKEGEAGRRKISQYT RYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITE RGIGNGISIIIFAGIVAGLPPAIGHTIEQARQGDLHFLLLLLVAVLVFAVTFFVVFVERG QRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGW NWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGE QTAKYIDKVMTRLTLIGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQV QTLMMSSQYESALKKANLKGYNR >gi|316917549|gb|ADCU01000023.1| GENE 25 17125 - 17559 704 144 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238921423|ref|YP_002934938.1| 50S ribosomal protein L15, putative [Edwardsiella ictaluri 93-146] # 1 144 1 144 144 275 95 7e-73 MRLNTLSPAEGSKHASKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRR LPKFGFTSRKAMITAEVRLSEIALVEGDVIDLNTLKAANVVGPQIEFAKVMLSGEINRAV TLRGLRVTKGARAAIEAAGGKIEE >gi|316917549|gb|ADCU01000023.1| GENE 26 17563 - 17742 292 59 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50122933|ref|YP_052100.1| 50S ribosomal protein L30 [Pectobacterium atrosepticum SCRI1043] # 1 59 1 59 59 117 100 4e-25 MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAVRGMVNAVSYMVKVEE >gi|316917549|gb|ADCU01000023.1| GENE 27 17749 - 18249 818 166 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50122934|ref|YP_052101.1| 30S ribosomal protein S5 [Pectobacterium atrosepticum SCRI1043] # 1 166 1 166 166 319 98 4e-86 MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAI QKAMEKARRNMMNVALNSGTLQHPVKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGV HNVLAKAYGSTNPINVVRATIDGLASMKSPEMVAAKRGKSVEEILG >gi|316917549|gb|ADCU01000023.1| GENE 28 18264 - 18617 552 117 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16762859|ref|NP_458476.1| 50S ribosomal protein L18 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 117 1 117 117 217 95 3e-55 MDKKSARIRRATRARRKLKELGATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAISE QLKYTGNKDAAIAVGKTIAERALEKGIKGVSFDRSGFQYHGRVQALADAAREAGLQF >gi|316917549|gb|ADCU01000023.1| GENE 29 18627 - 19160 850 177 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157372761|ref|YP_001480750.1| 50S ribosomal protein L6 [Serratia proteamaculans 568] # 1 177 1 177 177 332 95 8e-90 MSRVAKAPVVIPAGVEVKLNGQVISIKGKNGELTRTVHDAVEVKHADNALTFAPREGFAN AWAQAGTTRALLNAMVVGVTEGFTKKLQLVGVGYRAAVKGNSVNLALGFSHPVEHALPAG ITAECPSQTEIVLKGADKQLIGQVAADLRAYRRPEPYKGKGVRYADEVVRTKEAKKK >gi|316917549|gb|ADCU01000023.1| GENE 30 19174 - 19566 634 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|22127873|ref|NP_671296.1| 30S ribosomal protein S8 [Yersinia pestis KIM] # 1 130 1 130 130 248 98 9e-65 MSMQDPIADMLTRIRNGQAANKVAVTMPSSKLKVAIANVLKEEGFIEDFKIEGDTKPVLE LVLKYFQGKAVVESIQRISRPGLRIYKKKDELPKVMAGLGIAVVSTSKGVMTDRAARQAG LGGEIICYVA >gi|316917549|gb|ADCU01000023.1| GENE 31 19600 - 19905 495 101 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|85060243|ref|YP_455945.1| 30S ribosomal protein S14 [Sodalis glossinidius str. 'morsitans'] # 1 101 1 101 101 195 96 1e-48 MAKQSMKAREVKRVKLADKFFAKRVELKAIISNVNASDEDRWDAVLKLQTLPRDSSPSRQ RNRCRQTGRPHAFLRKFGLSRIKVREAAMRGEIPGLKKASW >gi|316917549|gb|ADCU01000023.1| GENE 32 19919 - 20458 895 179 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|1173052|sp|P46178|RL5_BUCAK RecName: Full=50S ribosomal protein L5 # 1 179 1 179 179 349 97 5e-95 MAKLHDYYKDEVVKQLMSEFGYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAI SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLISIAVPRIRDFRGLSAK SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDDEGRALLTAFNFPFRK >gi|316917549|gb|ADCU01000023.1| GENE 33 20473 - 20787 514 104 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157148885|ref|YP_001456204.1| 50S ribosomal protein L24 [Citrobacter koseri ATCC BAA-895] # 1 104 1 104 104 202 99 8e-51 MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPALNQPGGIVE KEAAIQVSNIALFNAATGKADRVGFRFEDGKKVRFFKSNSETIK >gi|316917549|gb|ADCU01000023.1| GENE 34 20798 - 21169 619 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16762853|ref|NP_458470.1| 50S ribosomal protein L14 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 123 1 123 123 243 100 5e-63 MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKA VVVRTKKGVRRPDGSVIRFDGNACVILNNNSEQPIGTRIFGPVTRELRNEKFMKIISLAP EVL >gi|316917549|gb|ADCU01000023.1| GENE 35 21334 - 21588 413 84 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803838|ref|NP_289872.1| 30S ribosomal protein S17 [Escherichia coli O157:H7 EDL933] # 1 84 1 84 84 163 94 4e-39 MTDQIRTLQGRVVSDKMEKSVVVTIERMVKHPMYGKFIKRTTKLHVHDENNECGIGDVVE IRECRPLSKTKSWTLVRVVEKAVL >gi|316917549|gb|ADCU01000023.1| GENE 36 21588 - 21779 291 63 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16762851|ref|NP_458468.1| 50S ribosomal protein L29 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] # 1 63 1 63 63 116 96 5e-25 MKAQELREKSVEELNTELLSLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLTEK AGA >gi|316917549|gb|ADCU01000023.1| GENE 37 21779 - 22189 695 136 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|188535271|ref|YP_001909068.1| 50S ribosomal protein L16 [Erwinia tasmaniensis Et1/99] # 1 136 1 136 136 272 100 8e-72 MLQPKRTKFRKVHKGRNRGLAQGTDVSFGTFGLKAVGRGRLTARQIEAARRAMTRAVKRQ GKIWIRVFPDKPITEKPLEVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLA AAKLPIKTTFVTKTVM >gi|316917549|gb|ADCU01000023.1| GENE 38 22203 - 22904 1179 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15833433|ref|NP_312206.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. Sakai] # 1 233 1 233 233 458 99 1e-128 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK >gi|316917549|gb|ADCU01000023.1| GENE 39 22922 - 23254 538 110 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|123444093|ref|YP_001008063.1| 50S ribosomal protein L22 [Yersinia enterocolitica subsp. enterocolitica 8081] # 1 110 1 110 110 211 100 1e-53 METIAKHRHARSSAQKVRLVADLIRGKKVSQALETLAYTNKKAAGLVKKVLESAIANAEH NDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR >gi|316917549|gb|ADCU01000023.1| GENE 40 23269 - 23547 479 92 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|37528539|ref|NP_931884.1| 30S ribosomal protein S19 [Photorhabdus luminescens subsp. laumondii TTO1] # 1 92 1 92 92 189 97 9e-47 MPRSLKKGPFIDLHLLKKVEKAVESGDKKPIKTWSRRSTVFPNMIGLTIAVHNGRQHVPV FVADEMVGHKLGEFAPTRTYRGHAADKKAKKR >gi|316917549|gb|ADCU01000023.1| GENE 41 23562 - 24386 1416 274 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|22127863|ref|NP_671286.1| 50S ribosomal protein L2 [Yersinia pestis KIM] # 1 274 1 274 274 550 97 1e-155 MAIVKCKPTSPGRRHVVKVVNPELHKGKPYAPLLEKLSKSGGRNNNGRITTRHIGGGHKQ HYRLVDFKRNKDGVPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGV DAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVARDGAYVTLRLRSGE MRKVPSDCRATLGEVGNAEHMLRVLGKAGASRWRGVRPTVRGTAMNPVDHPHGGGEGRNF GKHPVSPWGLQTKGKKTRSNKRTDKFIVRRRSKK >gi|316917549|gb|ADCU01000023.1| GENE 42 24406 - 24708 464 100 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|156932234|ref|YP_001436151.1| 50S ribosomal protein L23 [Enterobacter sakazakii ATCC BAA-894] # 1 100 1 100 100 183 93 5e-45 MIREERLLKVLRAPHVSEKASMVMEKTNTIVLKVAKDATKAEIKAAVKKLFEVEVDAVHT LVVKGKVKRHGQRVGRRSDWKKAYVTLKEGQNLDFIGGAE >gi|316917549|gb|ADCU01000023.1| GENE 43 24705 - 25310 978 201 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157372775|ref|YP_001480764.1| 50S ribosomal protein L4 [Serratia proteamaculans 568] # 1 201 1 201 201 381 98 1e-104 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW RQKGTGRARSGSVKSPIWRSGGVSFAAKPQDHSQKVNKKMYRGALKSILSELVRQDRLIV VEKFSVEAPKTKLLAQKLKDMALEDVLIVTGEVDENLFLAARNLYKVDVRDVTGIDPVSL IAFDKVVMTADAVKQVEEMLA >gi|316917549|gb|ADCU01000023.1| GENE 44 25321 - 25950 1016 209 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227328949|ref|ZP_03832973.1| 50S ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum WPP14] # 1 209 1 209 209 395 97 1e-109 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLDNDGYCAVQVTTGAKKANRV SKPEAGHFAKAGVEAGRTLREFRLNEGEEFTVGQSISVEIFADVKKVDVTGTSKGKGFAG TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRV DAERNLLLVKGAVPGATGGDLIVKPAVKA >gi|316917549|gb|ADCU01000023.1| GENE 45 25983 - 26294 514 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15603281|ref|NP_246355.1| 30S ribosomal protein S10 [Pasteurella multocida subsp. multocida str. Pm70] # 1 103 1 103 103 202 100 8e-51 MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKD ARDQYEIRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG >gi|316917549|gb|ADCU01000023.1| GENE 46 26708 - 27421 174 237 aa, chain + ## HITS:1 COG:XF2537 KEGG:ns NR:ns ## COG: XF2537 COG1989 # Protein_GI_number: 15839126 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Xylella fastidiosa 9a5c # 96 230 134 269 287 95 43.0 5e-20 MAPFADNIEHILSGMPFRILISLLFAFVCGCVTRFVWNRLPSKILRVNTDSLEHPHLPFY NLCRGSTNEFIFYGLLFTGICIFTSSDFTKLPLIWLISWFLTTLSIIDLRHYLLPDILTL PFLWLGLLYNAYSHTVRPSDAIAGAAIGYLSIWLLFWIVKLRMHKHGIGLGDAKLLAALG AWTGKDNVTWICLWASLGGIVWWALRTIYSNDKNHPLPFGPCLAIPGWVVIADILRL >gi|316917549|gb|ADCU01000023.1| GENE 47 27426 - 27902 522 158 aa, chain - ## HITS:1 COG:bfr KEGG:ns NR:ns ## COG: bfr COG2193 # Protein_GI_number: 16131215 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Escherichia coli K12 # 1 158 1 158 158 251 87.0 3e-67 MKGDKKVITHLNKLLGNELVAINQYFLHARMFKNWGLTRLNDVEYHESIDEMKHADRYIE RILFLEGLPNLQDLGKLNIGEDVEEMLRSDLKLELDGAKNLREGIAYCDSVHDYVSRDLM IDILSDEEKHIDWLETELDLIQRLGIQNYLLAQVKEEA >gi|316917549|gb|ADCU01000023.1| GENE 48 27975 - 28172 74 65 aa, chain - ## HITS:1 COG:YPO0205 KEGG:ns NR:ns ## COG: YPO0205 COG2906 # Protein_GI_number: 16120544 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin-associated ferredoxin # Organism: Yersinia pestis # 1 57 1 57 64 79 63.0 2e-15 MYVCLCNGISDKTIRHAIRKYQPSSLHHLRKIVPLGTECGKCIRQAREIFDEETAVIQSD FINVA >gi|316917549|gb|ADCU01000023.1| GENE 49 28330 - 29514 1656 394 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 393 1 406 407 642 78 0.0 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGSARAFDQIDNAPEEKARG ITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHI LLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIIRGSALKALE GEAEWEAKIVELAETLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVG EEVEIVGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVLAKPGSIK PHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMI VTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVMS >gi|316917549|gb|ADCU01000023.1| GENE 50 29585 - 31699 1946 704 aa, chain - ## HITS:1 COG:ECs4191 KEGG:ns NR:ns ## COG: ECs4191 COG0480 # Protein_GI_number: 15833445 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Escherichia coli O157:H7 # 1 704 1 704 704 1363 96.0 0 MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG ITITSAATTAFWSGMAKQFEPHRVNIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ PQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVGQIKTRLGANPVPLQLAIGAEEGFT GVVDLVKMKAINWNDADQGVTFEYEDIPADMAELAEEWHQNLIESAAEASEELMEKYLGG EELTEEEIKKALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPIDVPAINGMLD DGKDTPAERHANDDEPFAALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKSARERF GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAV EPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE ANVGKPQVAYREAIRAKVTDIEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDI KGGVIPGEYIPAVDKGIQEQLKSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIA FKDGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLRGQESNVTGVVIHAEVPL SEMFGYATQLRSLTKGRASYSMEFLKYDDAPSNVAQAVIEARGK >gi|316917549|gb|ADCU01000023.1| GENE 51 31793 - 32263 765 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227112096|ref|ZP_03825752.1| 30S ribosomal protein S7 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] # 1 156 1 156 156 299 98 6e-80 MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAEAIVYTALETLAQRSGKSELE AFEVALDNVRPAVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRL ANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW >gi|316917549|gb|ADCU01000023.1| GENE 52 32360 - 32734 646 124 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|22127853|ref|NP_671276.1| 30S ribosomal protein S12 [Yersinia pestis KIM] # 1 124 1 124 124 253 100 4e-66 MATINQLVRKPRSMKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNG FEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQSRSKYGVK KPKA >gi|316917549|gb|ADCU01000023.1| GENE 53 32877 - 33164 123 95 aa, chain - ## HITS:1 COG:yheL KEGG:ns NR:ns ## COG: yheL COG2168 # Protein_GI_number: 16131222 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in oxidation of intracellular sulfur # Organism: Escherichia coli K12 # 1 95 1 95 95 89 47.0 1e-18 MLHTLAKSPTAADLTTLCAIAGNNDAILLLQDGVLCGLVNTHSLEKLISASTSLYALKAD VIARGLSARISSNIVLLDYNQFVELSVKHPQQLSW >gi|316917549|gb|ADCU01000023.1| GENE 54 33183 - 33542 316 119 aa, chain - ## HITS:1 COG:YPO0198 KEGG:ns NR:ns ## COG: YPO0198 COG2923 # Protein_GI_number: 16120537 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in the oxidation of intracellular sulfur # Organism: Yersinia pestis # 2 119 4 121 121 151 60.0 3e-37 MKRLAFVFTQPPHTTSSGREGLDALLAASAFSEDIQVFFVGDGVFQLLPDQKPAEILCRD YVATFGVMSLYDIEEVFICSESLEERGLLGFESWIIDVQVRTAAQIRQNLEQRDVVLTF >gi|316917549|gb|ADCU01000023.1| GENE 55 33552 - 33941 348 129 aa, chain - ## HITS:1 COG:ECs4196 KEGG:ns NR:ns ## COG: ECs4196 COG1553 # Protein_GI_number: 15833450 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Escherichia coli O157:H7 # 2 129 1 128 128 181 75.0 3e-46 MLSFSLFVTGPAYGTQAASSAYQFAQAVIASGHHLVSVFFYREGVSNANQLTSPASDEFD LVRGWQSLAQEHGVVLNVCVAAALRRGVVSHDEATQLGLPASNLQDGFVLSGLGALAEAA LTCDRIMQF >gi|316917549|gb|ADCU01000023.1| GENE 56 33941 - 34663 600 240 aa, chain - ## HITS:1 COG:ECs4197 KEGG:ns NR:ns ## COG: ECs4197 COG2964 # Protein_GI_number: 15833451 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 240 5 244 244 412 87.0 1e-115 MSNTLMPGDTSELDLLDERPFSQTDHEILKSYEAVVDGLAMLIGSHCEIVLHSLEDLKCS AVRIANGEHTGRKIGSPITDLALRMLHDMAGEDSSVSKAYFTRAKSGVLMKSVTIAIRNK EQRVIGLLCINMNLDVPFSQIMETFIPKASQDVASSVNFASSVDDLVAQTLEFTIEEVNA DRSVSNNAKNRQIVLNLHEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDLQGSDR >gi|316917549|gb|ADCU01000023.1| GENE 57 34871 - 35689 892 272 aa, chain - ## HITS:1 COG:YPO0195 KEGG:ns NR:ns ## COG: YPO0195 COG0545 # Protein_GI_number: 16120534 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Yersinia pestis # 1 269 1 265 266 340 78.0 2e-93 MKSFFKVTVLATTMALALNASAFAADAAKATDAAPTATNSKFKNDDQQAAYALGASLGRY MENSLKEQEKLGIKLDKDQLIAGVQDAFAGKSKLTDQEIEGTLQGFEARVKASAQAKMEQ DAKANADAGKKFRDAFAKEKNVKTTKTGLMYQVDKEGTGAEPKDSDTVVVNYKGTLTDGT EFDNSYSRGEPLSFRLDGVIPGWTEGLKHIKKGGKIKLVIPPELAYGKTGVPGIPANSTL VFDVELLDVKAAPKADVDAAKAAAKAEAKAGK >gi|316917549|gb|ADCU01000023.1| GENE 58 35962 - 36195 230 77 aa, chain + ## HITS:1 COG:YPO0194 KEGG:ns NR:ns ## COG: YPO0194 COG2900 # Protein_GI_number: 16120533 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 77 1 77 77 65 61.0 2e-11 MQPSALDREELESRFEMLESRLAFQEMTIEELNQTVIALQLEMNKYREQMHLLVDKLKAA QPSMMAHPSEETPPPHY >gi|316917549|gb|ADCU01000023.1| GENE 59 36265 - 36861 540 198 aa, chain - ## HITS:1 COG:STM3455 KEGG:ns NR:ns ## COG: STM3455 COG1047 # Protein_GI_number: 16766744 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 2 # Organism: Salmonella typhimurium LT2 # 1 147 1 147 196 249 92.0 2e-66 MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLEAALEGHAEGDSFDV HVGANDAYGNYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITEVDDDHVVVD GNHMLAGQNLNFHVEVIAIREATAEELEHGHVHGEHDHHHEHGEGCCGGHGHDHGHDHGE EGGCCGGNGKGNGGCGCH >gi|316917549|gb|ADCU01000023.1| GENE 60 36969 - 37163 125 64 aa, chain - ## HITS:1 COG:STM3456 KEGG:ns NR:ns ## COG: STM3456 COG3529 # Protein_GI_number: 16766745 # Func_class: R General function prediction only # Function: Predicted nucleic-acid-binding protein containing a Zn-ribbon domain # Organism: Salmonella typhimurium LT2 # 1 64 3 66 66 86 60.0 1e-17 MKKRFIAGATCPACKAQDTLVVWRENNIEHAECVKCGHQLSQPEADVSEHVQHNNQMIGI FKPE >gi|316917549|gb|ADCU01000023.1| GENE 61 37190 - 39004 1061 604 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 8 563 9 571 618 413 38 1e-114 MTEEGSLLPAILLFLFAAVVAVPIARRIGIGTVLGFLIAGIAIGPWGLGFIRDVDEILHF SELGVVFLLFIIGLELNPSKLWSLRRSIFGVGAGQVLLTAAILGGLLLLTDFSWQAAVIG GIGLAMSSTAMALQMMREKGMNRNEGGQLGFSVLLFQDMAVIPALALIPVLVGSSNKDTD WAFIAMKVGALLGMLIGGRYLLRPIFRYIAATGVREIFTAAALLVVLGSAMFMDALGVSM AMGTFIAGVLLAESEFQHELEIAIEPFKGLLLGLFFISVGMALNLGVLYTHLPEVLMGVA ILVVVKGGVLYLLARIAGIRRSVRMQFAAVLSQGGEFAFVLFSAASTQKLLQGDQMALLL VIVTLSMVTTPLLMQLVDRILEKRYNPSDESEETPFVEDDDPQVIIVGFGRFGQVIGRLL MANKMRITVLERDVSAVSVMRRYGYKVYYGDATELELLRAAGAEKAEAIVITCNEPEDTL AVVHLCQQHFPHLKILARARGRVEAHELLMAGVSQFSRETFSSALELGRKALMELGMHPH QAHRAQQHFRRLDMRMLRELMPHHQGDVTQISRVKEARRELEDIFQREMQHERRQMNDWD EEEL >gi|316917549|gb|ADCU01000023.1| GENE 62 39001 - 39555 430 184 aa, chain - ## HITS:1 COG:YPO0190 KEGG:ns NR:ns ## COG: YPO0190 COG2249 # Protein_GI_number: 16120529 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Yersinia pestis # 1 181 2 182 183 312 82.0 2e-85 MSQPPKVLLLYAHPESQDSVANRVLLQPAQQLEHVTVHDLYAHYPDFFIDIHHEQKLLRE HQVIVFQHPLYTYSCPALLKEWLDRVLTRGFASGVGGNALRGKYWRSVVTTGEPEGAYQM GGYNRYTMDEVLRPFELTAGMCHMHWMSPMVVYWARRLKPDVLQSHAKAYGQWLESPLAG GGSL >gi|316917549|gb|ADCU01000023.1| GENE 63 39707 - 41635 1859 642 aa, chain + ## HITS:1 COG:STM3459 KEGG:ns NR:ns ## COG: STM3459 COG0488 # Protein_GI_number: 16766748 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Salmonella typhimurium LT2 # 1 633 1 631 635 1026 82.0 0 MIVFSSLQIRRGTRVLLDNASATVNPGQKVGLVGKNGCGKSTLLSLLKGEMTADAGSFNF PGNWALAWVNQETPALDIPALEYVLDGDREFRQLEAELNDANERNDGNAIALIHGKLDAI QAWTIRSRASSLLHGLGFSQSQLEEPVKSFSGGWRMRLNLAQALICRSDLLLLDEPTNHL DLDAVIWLERWLKSYTGTLILISHDRDFLDPIVDKILHIEQEQLFEYTGNYSSFEQQRAT KLSQQQSMYESQQQRVAHLQSYIDRFKAKASKAKQAQSRVKMLERMELIAPAHVDNPFHF SFREPESLPNPLLRMEKVSAGYGDKTILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAG ELAPQKGEIGLAKGVKLGYFAQHQLEYLRADESPLQHLTRIAPRETEQQLRDYLGGFGFR GDKVTEHTARFSGGEKARLVLALVVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL VVVSHDRHLLRSTTDDLYLVHDGQVEPFAGDLEDYQQWMIDLQRQQAQQDSNKTEGETSG NSAQARKDQKRRAAEFRTQTQPIRKHIMKMEQQMEKLSAQLATLEEKLSDSDLYDISRKA ELTECLQQQNQTKAALEEAEMEWLDGQEKLEAMTLAFEAEND >gi|316917549|gb|ADCU01000023.1| GENE 64 41714 - 42562 676 282 aa, chain - ## HITS:1 COG:YPO0185 KEGG:ns NR:ns ## COG: YPO0185 COG2175 # Protein_GI_number: 16120526 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Probable taurine catabolism dioxygenase # Organism: Yersinia pestis # 1 281 1 281 282 447 78.0 1e-126 MNERLTIQPLSPAIGAVVSNLNLSRPLSDAQFEQLYHALLKHQVLFAREQVITPLQQREL ASRFGDLHIHPVYPHAAGVEEIIELDTHHDNPPDNDNWHTDVTFIENPPLGAILAAKRVP EVGGDTLWSSGIAAYEALSPQLKVLLSGLQAEHDFEKSFPEHKHLRSEEEHQRWLQAKRQ HPPLLHPVVRTHPVSGRQALFVNEGFTTRLVGIPQQEGEALLQFLFRHTTKPEFQVRWRW QQDDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKPFYRG >gi|316917549|gb|ADCU01000023.1| GENE 65 42559 - 43407 637 282 aa, chain - ## HITS:1 COG:YPO0184 KEGG:ns NR:ns ## COG: YPO0184 COG0600 # Protein_GI_number: 16120525 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Yersinia pestis # 1 282 1 284 284 354 76.0 1e-97 MSIHSTLKNDTREVANKVAVSRGRKVRVPSNVVVSAFTLLVILAVWWAVTALHLISPLFL PAPQQVLKQWVSISTQGFMDATLGQHLAASLSRILIALLAAVVIGVPVGIAMGLNPTVRG ILDPIIEIYRPVPPLAYLPLMIIWFGIGETSKILLIYLAIFAPVTLAAAAGVRSVEQVRV RAAQALGASRWQVLWYVVLPNALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMIQSA GEFLATDVVIAGISVIAFIAFALELGLRALQRRLTPWHGVKK >gi|316917549|gb|ADCU01000023.1| GENE 66 43404 - 44186 760 260 aa, chain - ## HITS:1 COG:YPO0183 KEGG:ns NR:ns ## COG: YPO0183 COG4525 # Protein_GI_number: 16120524 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type taurine transport system, ATPase component # Organism: Yersinia pestis # 1 251 1 251 255 388 78.0 1e-108 MLSVNHLSASYDGKKVLDDISLQIASGQLVVVLGPSGCGKTTLLNLVAGFSQPDAGSISL SGRNVSGPSAERGVVFQNEGLLPWRNVLANVAFGLQLQGVAREERTSIALRMLRWVGLEG YERHFIWQLSGGMRQRVGIARALAADPQLLLLDEPFGALDAFTREQMQELLLGVWRKTGK QILLITHDIEEAVFLASELILLSPGPGRIVERLALNFGQRYADGEPCRAIKSDPAFIERR EYVLSRVFEQRTPHVQEAWL >gi|316917549|gb|ADCU01000023.1| GENE 67 44197 - 45195 1059 332 aa, chain - ## HITS:1 COG:YPO0182 KEGG:ns NR:ns ## COG: YPO0182 COG4521 # Protein_GI_number: 16120523 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type taurine transport system, periplasmic component # Organism: Yersinia pestis # 22 332 37 347 353 454 81.0 1e-128 MMSKTFSLRGVAAFLSLTLAATSAYALDVTVAYQTSAEPAKVAQADNTFAKASGANVDWR KFDSGSSVVKALASGDVQIGNIGSSPLAAAVSQGLPIEVFLLASQLGNSEALVVKKEIKS PQDLIGKRIAVPFVSTTHYSLLAALKHWGIKPDQLNILNLQPPAIAAAWQRGDIDGAYVW APAVNELAKTGSVLTDSEQVGQWGAPTLDVWVVRKDFAQQHPDVVTAFARTTLAAQKAYL AEPDHWLKESQNIDKLAKLSGVPQEQVPGLVKGNRYLPVAEQVSELGQPVDKAIYDTAVF LQQQGKIPQVAKDYRRFVNNQFVKQVQAEPQS >gi|316917549|gb|ADCU01000023.1| GENE 68 45410 - 46015 551 201 aa, chain - ## HITS:1 COG:YPO0181 KEGG:ns NR:ns ## COG: YPO0181 COG1280 # Protein_GI_number: 16120522 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Yersinia pestis # 1 201 1 200 200 265 83.0 6e-71 MELGLFLSMLGFLWVAAITPGPNNMLLTSSGANFGFMRSIPLMLGIMLGMQSLLLLVAFG VGSLLLVYPALHTTLKILGSAYLLYIAWKIASSSYEKLDPNAVKVKKPVNWYQGWLLQFL NPKAWLMGLGAVASFSLAGSGYNHSIIAISIAMFMVNLVSGIIWLGFGTVIGRLLNSRRA WFTFNISMGLLTAACVLLIWH >gi|316917549|gb|ADCU01000023.1| GENE 69 46138 - 47097 777 319 aa, chain + ## HITS:1 COG:YPO0180 KEGG:ns NR:ns ## COG: YPO0180 COG0429 # Protein_GI_number: 16120521 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Yersinia pestis # 1 317 8 324 326 485 76.0 1e-137 MRGISNPHLQTILPRLFRRKVLLQPHWQRLALPDGDFIDLAWSEPPEQAQHKPRVVLFHG LEGSFYSPYAHGLLHAWKEAGWLGVVMHFRGCSGEPNKMNRIYHSGETEDARFFLNWLRE THGAVPTAAVGVSLGGNMLAYYLGQEGANATLDAAVVVSAPLMLEPCSYRLEQGFSRVYQ NYLLGQLKQNAQRKLERYPNTLPLDLKALKNLKRIRDFDDVITSRIHGFDNATDYYRRCS ALPLLPRITVPLLIIHAKDDPFMTPEVIPRPEDLPSNIEYQLTEFGGHVGFISGSFKKPQ MWLEQRIPDWLAPHLEKAQ >gi|316917549|gb|ADCU01000023.1| GENE 70 47094 - 47330 316 78 aa, chain + ## HITS:1 COG:YPO0179 KEGG:ns NR:ns ## COG: YPO0179 COG3089 # Protein_GI_number: 16120520 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 78 1 78 78 110 70.0 8e-25 MIIPWENLATDTLDSLIESFVLREGTDYGVHEKSLTQKVEDVRRQLKNGEAVLVWSELHE TVNIMPKGQFRDTPEEYE >gi|316917549|gb|ADCU01000023.1| GENE 71 47438 - 49285 934 615 aa, chain + ## HITS:1 COG:no KEGG:XCC2749 NR:ns ## KEGG: XCC2749 # Name: not_defined # Def: hypothetical protein # Organism: X.campestris # Pathway: not_defined # 18 600 16 595 618 318 36.0 6e-85 MSLLAAHHSKTQVSPSDLPIKTRIVIVLVCLIQGCLLYLCNHFSDREWMIPHSSALLYTQ VLSGSLPLIFVMSVNTLRDKILWKALLAYTAIFVAMTAWIKWNDVGVRDYGSLFGTFYLA LFLIVFVTLPWLQARINNPSSSIDYSELHGNIWKNTITAVLTLLISGLMWGILSLGAGLF KLIGIDFFYELFFRHEIFMYLANGLIVAIGVLISRTHPKLIITVRNLLSLMVKGLLPLLS FFALIFIFSLPFTGIDALTDKWSSATTLLTTMSLLLALLVNAIYLSSDGIDKKPYPNLIR YIINGSLLVLPIYAILSTYYLGQRIVQYGWTPDRLRASVVVGLSLCLTLAYASAVVRKNN IWLHSLGSINKKMMWLIAVIVVLCNSPIIDPYRISVNDQMNRYSTGKVSPDDLDLIMLRF DSGRRGNDALQALRSDIKFVSDPRRKLKLEKTLLQTTRWGSYGDDDKKPYAAFTPEIARK NIQLAAGTPSPESTWWESLPKDIGREEHIDDCYLMANACVVTTLDLNNDGNKEHVLCNFS DPKEPFCQVYTYKKQGWVIAAHIDFNFRDTLNKNTLDTAKLKNIILGGQLKAVPKEWSDI QIQDTTIDVSYYDLR >gi|316917549|gb|ADCU01000023.1| GENE 72 49321 - 50190 794 289 aa, chain + ## HITS:1 COG:prkB KEGG:ns NR:ns ## COG: prkB COG3954 # Protein_GI_number: 16131234 # Func_class: C Energy production and conversion # Function: Phosphoribulokinase # Organism: Escherichia coli K12 # 1 289 1 289 289 534 88.0 1e-152 MSAKHPIIAVTGSSGAGTTTTSVAFRKIFQQFHLKAAELEGDSFHRYTRPEMDAAIRKAR EQGRHISYFGPEANDFSFLEQSFIEYGQHGRGRSRKYLHTYDEAVPYNQVPGTFTPWEPL PEPTDVLFYEGLHGGVVTQQHNVAQHVDLLVGVVPIVNLEWIQKLVRDTGERGHSREAVM DSVVRSMEDYIGYITPQFSRTHINFQRVPTVDTSNPFAAKAIPSSDESFVVIHFQGLDNI DFPYLLAMLQGSFISHINTLVVPGGKMGLAMELIMTPLVQRLIEGKKIE >gi|316917549|gb|ADCU01000023.1| GENE 73 50256 - 50663 303 135 aa, chain - ## HITS:1 COG:YPO0176 KEGG:ns NR:ns ## COG: YPO0176 COG1765 # Protein_GI_number: 16120517 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Yersinia pestis # 1 130 1 130 135 234 90.0 5e-62 MQARVKWVEGMTFLGESASGHQILMDGNAGDKAPSPMEMVLMSAGGCSAIDVVSILQKGR LDVRDCEVKLTSERREEAPRLFTHINLHFIVTGKGLTDKAVERAVALSAEKYCSVALMLG QAVNITHSFETIVVE >gi|316917549|gb|ADCU01000023.1| GENE 74 50993 - 51625 682 210 aa, chain + ## HITS:1 COG:ECs4208 KEGG:ns NR:ns ## COG: ECs4208 COG0664 # Protein_GI_number: 15833462 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 1 210 1 210 210 416 99.0 1e-116 MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM ILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQ MASRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS RETVGRILKMLEDQNLISAHGKTIVVYGTR >gi|316917549|gb|ADCU01000023.1| GENE 75 51669 - 53747 1091 692 aa, chain + ## HITS:1 COG:STM3467 KEGG:ns NR:ns ## COG: STM3467 COG1289 # Protein_GI_number: 16766755 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 692 1 692 695 933 66.0 0 MWRRFIYHPEVNYALRQTLVLCLPVLFGLLTGNLQLGLMFSLVPACCNIAGLDTPHKRFI KRLIVGGSLFAFSSFLLQQCLLWQIPLPLIMLGLALLLGVNGEISPLHARLLPAALVASI FTLSMAGTVPIWHGPLLYIVGTIWYGAFTWFWFLLWKGQPIRENLSQLYTQLGDYMDAKY SLLTQHIDPETALPPLLQRQQKVMDLITQLYQQMHMLSLVHNPEYKRLLRYFQVALDLQE HITVSLSQPDEVQSLVAKSQAEAILRRNAQVISERLRTVAGDILYHRYPKHFSMDNELAA LEKLANQHPDNPVGKFCYYHFSRVARLLVRQRPLYQRNLMSTQQRLPFWPALRAYLSFKS VALRNAARLGITLAAGSSLGMLFHLPKPYWVLLTTMLVIQNGYNATRVRIQHRALGTFAG LIIAAGLLQLDLPLNATLACMLVITIAAYLVLRKNYGLAVIGFTVTAVYTLQLLQLNGLH FLVPRLIDTVLGCILAFASTIWLWPQWQSGLLRKNAHQALEAYQDELRLLLSPEPKATDL AYARMKVNQAHNAVFTSLNQAMQEPGFDSRYLTDMRLWITHSQFIVEHLNAMTILARDHY MLTENLAQDYLQRCEIALQLCQQRLEHDGPTLSNNAAVFQSDEQETSGMPVTQIEVHLRR IIAHLRAMHTISSIAWRQRPHHGIWMSRRLRD >gi|316917549|gb|ADCU01000023.1| GENE 76 53906 - 54178 102 90 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFTTLSVISVMPLAYFIGTFSQRLNSNLCYSYMIAELATTSTVAIQSSSSATQQKYIDGL KSIPNYGYESNCNDMTAAVKRLSQSVKDAK >gi|316917549|gb|ADCU01000023.1| GENE 77 54235 - 55458 1110 407 aa, chain - ## HITS:1 COG:STM3468 KEGG:ns NR:ns ## COG: STM3468 COG4992 # Protein_GI_number: 16766756 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Salmonella typhimurium LT2 # 3 404 4 405 405 632 74.0 0 MAKQQAVARDTFEKVMLPIYAPADFVPVRGMGSRVWDQQGREYVDFAGGIAVTALGHCHP ALVAALHEQGEKLWHVSNVFTNEPALRLAQKLIDATFAERVFFANSGAEANEAAFKLARY YASSKISPYKSKIIAFHHAFHGRTLFTVSVGGQPKYSDGFGPKPADIVHVPFNDLDAVKA VIDDHTCAVVLEPVQGEGGVMPATESFLKGVRELCDRHQALLVFDEVQSGMGRTGKLFTY MHYGVTPDILTTAKALGGGFPISAMLTTNEIASAMHVGTHGTTYGGNPLACAVAEAALDV INTPEVMAGIEERHSLFVEALANINAKYNVFTQVRGMGLLLGAELSPEYHGKARDILHAA AAEGLMLLNAGPDILRFAPSLVVEFADIHEGMMRLEKAIGAVIAKKS >gi|316917549|gb|ADCU01000023.1| GENE 78 55681 - 57210 1448 509 aa, chain + ## HITS:1 COG:YPO0168 KEGG:ns NR:ns ## COG: YPO0168 COG0433 # Protein_GI_number: 16120511 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Yersinia pestis # 15 509 23 512 513 733 80.0 0 MSAPLTIAKNQNVTLHLLPALANRHGLITGATGTGKTVTLQKMAEQFSRIGVPVFLADVK GDLSGIAAAGTLSEKLQKRLDALQVADWSPQACPVVPWDIFAEKGHPIRATVSDLGPLLL SRLLDLNDVQSGVLQLVFKIADDNNLLLLDMKDLRAVVQFVGDNAKQFTTEYGNISTASI GAIQRGLLTLDQQGANHFFGEPMLDINDLMRCDANGMGVINLLAADKLINQPKLYSVFLL WLLAELFEQLPEVGDVAQPKLVFFFDEAHLLFNDAPAALLDKIEQVVRLIRSKGVGIYFV TQNPLDIPDNVLGQLGNRVQHALRAFTPRDQKAVKAAAQTLRANPEFSTEVAITELGVGE ALVSFLDEGGRPTIVERAMVIAPESRMGPLTADELNHAINHSPLYGRYDETIDRESAYEK ITQQGFSTVDSGDENASAADVKKPEASAQEGGGLMGSLNEILFGTTGPRGGKKDGVVQTA AKSMARQVGSSLGRQILRGVLGSIMGGRK >gi|316917549|gb|ADCU01000023.1| GENE 79 57307 - 57888 469 193 aa, chain + ## HITS:1 COG:YPO0169 KEGG:ns NR:ns ## COG: YPO0169 COG0512 # Protein_GI_number: 16120512 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Yersinia pestis # 1 190 1 190 191 311 76.0 5e-85 MLLLIDNYDSFTYNLYQYFCELKADVVVRRNDELTLEHIESLAPSHLVISPGPCTPDEAG ISLAAIQHFAGKIPLLGVCLGHQALGQVFGAKVVRARQVMHGKTCAIRHTNSGVFHGLNN PLTVTRYHSLILEKETLPDCLEITAWSENNGEQDEIMGVRHRTLDVEGVQFHPESILSEQ GHELLQNFLRRQK >gi|316917549|gb|ADCU01000023.1| GENE 80 58055 - 58621 525 188 aa, chain - ## HITS:1 COG:ECs4214 KEGG:ns NR:ns ## COG: ECs4214 COG0652 # Protein_GI_number: 15833468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Escherichia coli O157:H7 # 1 188 1 190 190 295 78.0 3e-80 MFKRVLVTLAALFSLTVLAPAALAANSHVLLSTTAGNIEIELDSQKAPVSVKNFLDYVNS GYYNNTIFHRVIPGFMVQGGGFTADMQQKTTNAPIKNEADNGLRNLRGTIAMARTAEKDS ATSQFFINVADNAFLDHGQRDFGYAVFGKVTKGMDVVDKIAQVRTENVGPYQNVPSKPIV ITSVKVLP >gi|316917549|gb|ADCU01000023.1| GENE 81 58960 - 59265 359 101 aa, chain + ## HITS:1 COG:VC1281 KEGG:ns NR:ns ## COG: VC1281 COG1440 # Protein_GI_number: 15641294 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Vibrio cholerae # 1 100 1 100 101 97 52.0 4e-21 MKKILLCCAAGMSTSMLVQRMNTEATKRDIEVDIQAVPAAEFEQRIQDTDVVLLGPQVKY ELARFSAIAQPFGKPVAVIDMMDYGMLRGDKVLDKALALIA >gi|316917549|gb|ADCU01000023.1| GENE 82 59329 - 60654 1174 441 aa, chain + ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 1 434 4 437 446 442 54.0 1e-124 MSFYASLMRVVESHIAPLAGKIGSQRHIIAIRDGFISAMPFLIIGSIMLIIANPPFDAQT TSSFGQAWLSFAKAHWDTITMPFFMTMGLMSVFVTVGTAYSLAKSYGIDGLTAALLALMA FLLAAAPQLENKMALDYLGGQGVFTALICAIWSVELIRLLKKYNITIRMPEQVPPAIARS FELLYPVVGILLTVYPVSLFMQSEFNLLLPAAVMQVFQPLIAVGDTLPAILLALLIANLL WFAGIHGDNIVTGLLNPIFMANIAANAALMTHGMETTQILTAPYWSFYVCIGGSGSTLVL AILYLRSRSIHLRTIGKLSVVPAIFNINEPLLFGSPVVMNPTLFIPLIVVPMVNAILAYV ALHLDLVQKMVAIAPWTAPAPLGAMISAAWDYKALILVLVLMVIDILIWYPFFKVYEKQL LAQENEQAQEMAAAAETQPQP >gi|316917549|gb|ADCU01000023.1| GENE 83 60684 - 61028 338 114 aa, chain + ## HITS:1 COG:STM1314 KEGG:ns NR:ns ## COG: STM1314 COG1447 # Protein_GI_number: 16764665 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Salmonella typhimurium LT2 # 2 100 16 114 115 85 48.0 2e-17 MDFEQTIMELLVHSGSARSSALMALQRARAGDFVGAQEMMDESRAATREAHGIQTTLIGM DEGCGKLQINLITVHAQDHLMNAMVIQDLAGDMIELYRRLPEESAMQDQEESLA >gi|316917549|gb|ADCU01000023.1| GENE 84 61025 - 62332 1401 435 aa, chain + ## HITS:1 COG:YPO0166 KEGG:ns NR:ns ## COG: YPO0166 COG1486 # Protein_GI_number: 16120509 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Yersinia pestis # 1 435 1 435 437 697 78.0 0 MIPIKIAIIGGGSSYTPELVEGIIQRSEQIPLSELALVDIEAGHHKVDIIADLTRRMLAR NGLEHVKVTVHFSPDDAIRGASFVLTQLRVGQLPARAADERLGLKFGLIGQETTGVGGFA KALRTIPVMLNIARKVEQLAPDAWIINFTNPAGIVTEAVSRYTKAKIIGLCNVPVTMHHM IAKMLQRPYQDVQLRFAGLNHMVWVHQVTADGQDQTQRVIDMLCDGAALTMNNIKEEPWP PEFLRALGAIPCPYHRYFYQTRSMLKDEMAEASEGGTRAEQVMKVEKELFELYADPHLDH KPEQLSFRGGSFYSEVALELICAIHNNLGTRLVVNTPNHGAIRDLPDDAVIETDCIVDAQ GAHPLAFGSLPVSMVGLTQEVKSFERLTIEAAVHGDRKSALLALVTNPLIGDAALASPLL DEVLAVNKEYLPQFN >gi|316917549|gb|ADCU01000023.1| GENE 85 62566 - 63549 585 327 aa, chain + ## HITS:1 COG:YPO0165 KEGG:ns NR:ns ## COG: YPO0165 COG1609 # Protein_GI_number: 16120508 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 324 1 325 328 450 71.0 1e-126 MTTLEDVAARAGVSRATVSRVVNGDSNVREKTRLMVEMAIAELGYSPHPAARALASSQSQ TLGLVTTSYRGGFFGALMDNVQSEAESHRKQLLVTQGKNSAENEWQAIQRLYNLRCDGLI LHVRALSDEQLRQLAQQGKAFTILDRLVSGLEDRCIAFDHNHASQMATNRLIELGHTKIA CISGSSFRPSSQLRRQGFLDAMQAAGLQPVACLEGDYDMQSGYQMADKLLQSHHPTAIYC CNEEMAIGALLAITEHRLNIPNDISLICYDSGERAAFVRPALTSLHFPITDMARHATERL IDPKCAPEVFIPTIVDRGSVIARKGNL >gi|316917549|gb|ADCU01000023.1| GENE 86 63749 - 64933 1177 394 aa, chain + ## HITS:1 COG:YPO0163 KEGG:ns NR:ns ## COG: YPO0163 COG0477 # Protein_GI_number: 16120506 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 393 1 393 394 573 81.0 1e-163 MTNSNRIRLTWISFFSYALTGALVIVTGMVMGNIAEYFNLPISSMSNTFTFLNAGILVSI FLNAWLMEIIPLKRQLIFGFVLMILAVAGLMVGHSLVMFSLCMFVLGVVSGITMSIGTFL ITHIYEGRQRGSRLLFTDSFFSMAGMVFPIVAATLLANHVTWYWVYACIGVLYLAIFVLT LMSDFPVLGKKKDDQSEPVAKEKWGIGVLFLSIAALCYILGQLGFIQWVPEYASKHFNMS IEEAGALVSNFWTAYMVGMWIFSFILRFFDLQRIVTVLAALSTVMMYLFVTTEQVGMLSM YILGLGFVSSAIYTTLITLGSLQTKVSSPKLVNFILTCGTIGTMLTFIVTGPIVAKSGAH AALATANGLYLVVFVMCLLLGFVTRHRLHGHSTK >gi|316917549|gb|ADCU01000023.1| GENE 87 65002 - 66285 1122 427 aa, chain - ## HITS:1 COG:ECs0390 KEGG:ns NR:ns ## COG: ECs0390 COG0402 # Protein_GI_number: 15829644 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 1 427 1 427 427 819 90.0 0 MSNNLLQAVINARLAGKEGLWQIRLHDGKISAIEAQSGVLPVSPNNLDAEQGLVLPPFVE PHIHLDTTQTAGQPSWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHV RTHVDVSDATLTALKAMLEVKHEVAPWVDLQIVAFPQEGIMSYPNGEALLEEALRLGADV VGAIPHFEFTREYGVESLHKTFALAKKYDRLIDVHCDEIDDEQSRFVETVAALAHREDMG ARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGVTRVK EMLESGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGINLITHHSAK TLDLKDYGVDVGNSANLIVLPADSGFDAVRRQVPVRYSVRNGAVIACTQPAKTTLHLEQS EAVDFKR >gi|316917549|gb|ADCU01000023.1| GENE 88 66275 - 67546 1177 423 aa, chain - ## HITS:1 COG:codB KEGG:ns NR:ns ## COG: codB COG1457 # Protein_GI_number: 16128321 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Escherichia coli K12 # 1 423 1 419 419 641 94.0 0 MSQDNNYSQGPVPQSARKGVLALTFVMLGLTFFSASMWTGGALGTGLSYHDFFLAVLLGN LLLGIYTSILGYIGAKTGLTTHLLARFSFGVKGSWLPSLLLGGTQVGWFGVGVAMFAIPV GKATGLDINLLIAISGLLMTVTVFFGISALTVLSVIAVPAIACLGGYSVWLAVHGMGGLD ALKAVVPAEPLDFNVALALVVGSFVSAGTLTADFVRFGRNAKLAVLVSMVAFFLGNSLMF IFGAAGAAALGMADISDVMIAQGLLLPAIVVLGLNIWTTNDNALYASGLGFANITGMSSK TLSIINGIIGTLCALWLYNNFVGWLTFLSAAIPPVGGVIIADYLMNRRRYEHFATARMMS VNWVAILAVALGIAAGHWLPGVVPVNAVLGGALSYLVLNPILNRKTATTAVSTITNAEAN GVE >gi|316917549|gb|ADCU01000023.1| GENE 89 67930 - 70482 2561 850 aa, chain + ## HITS:1 COG:YPO0161 KEGG:ns NR:ns ## COG: YPO0161 COG1251 # Protein_GI_number: 16120504 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Yersinia pestis # 1 847 1 846 848 1546 84.0 0 MSKLRLAIIGNGMVGHRFIEELLEKAEPNQFEITVFCEEPRVAYDRVHLSSYFSHHTAEE LSLVREGFYQKHNVNVLVGERAITINRNEKIIYSNSGRTIHYDKLIMATGSYPWVPPIKG SEGQDCFVYRTIEDLNAIEACARRSKRGAVVGGGLLGLEAAGALKNLGVETHVIEFAPVL MAEQLDPMGGQQLREKIERMGVRVHTSKNTQEIVHSGSEARKTMRFADGTELEIDFIVFS TGIRPQDKLAHQCGLATARRGGIVINDQCQTSDPDVYAIGECASWNDRTFGLVAPGYKMA QVTVDHLLGKENGFHGADMSAKLKLLGVDVGGIGDAHGRTEGARSYVYLDESQEIYKRII VSADNKRLLGAVLVGDTSDYGNLLQLTLNDIELPEHPDSLILPAHAGKGKPAIGVESLPE TAQICSCFDVSKGDIIKAVNAGCHTVAAIKSATKAGTGCGGCIPLVTQVLNAELAKQGIE VNNHLCEHFAYSRQELYHLIRVEQIKSFSELLAKYGKGYGCEVCKPTVGSLLASCWNDYV LQPDLTPLQDTNDNFLANIQKDGTYSVIPRSAGGEITPEGLMAIGEIAREYNLYTKITGS QRIGMFGAQKDDLPAIWSKLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGFGVE LENRYKGIRTPHKMKFGVSGCTRECSEAQGKDVGIIATENGWNLYVCGNGGMKPRHGDLL AADLDRETLIKYLDRFMMFYIRTGDKLQRTSVWLESLEGGIDYLRSVIIDDKLGMNALLE QEMTRLREKVICEWTETVNTPAAQVRFAHFINSDQRDPNVQIVPERAQHRPARPDERIPV TLIATEEANA >gi|316917549|gb|ADCU01000023.1| GENE 90 70479 - 70814 369 111 aa, chain + ## HITS:1 COG:YPO0160 KEGG:ns NR:ns ## COG: YPO0160 COG2146 # Protein_GI_number: 16120503 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Yersinia pestis # 1 108 1 108 108 182 78.0 1e-46 MSQWINVCPLNDILPGTGVCALVGSHQVAVFRPYQDEQVFAISNIDPFAGSSVLSRGLIA EHQGELWVASPLKKQHFRLVDGYCLEDETHSVPHFKTRLVDGFVQVQAMGE >gi|316917549|gb|ADCU01000023.1| GENE 91 71103 - 71918 720 271 aa, chain + ## HITS:1 COG:YPO0159 KEGG:ns NR:ns ## COG: YPO0159 COG2116 # Protein_GI_number: 16120502 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Yersinia pestis # 5 259 1 255 268 405 85.0 1e-113 MEASMFTDTINKCATNAARIVRLNKDNPFGFWISSAMAGAYVGLGIILIFTLGNMVEPAL RPLLMGATFGIALTLVIIAGSELFTGHTMFLTLGVKAGTISGSQWLAILPQTWLGNLIGS IFVAVLYYYGGGNLLPVDSSLVHTAALAKTTAPAAVLFFKGALCNWLVCLAIWMALRTEG AGKFLAIWWCLLAFIASGYEHSVANMTLFALSWLGNHSESFTLSGIGHNLLWVTLGNTLS GAVFMGLGYWYATPRAQRPVAEVSAQQNQTA >gi|316917549|gb|ADCU01000023.1| GENE 92 71989 - 73371 1352 460 aa, chain + ## HITS:1 COG:cysG_2 KEGG:ns NR:ns ## COG: cysG_2 COG0007 # Protein_GI_number: 16131246 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Escherichia coli K12 # 211 455 1 245 247 411 81.0 1e-114 MDYLPIFCQLQQKACLLVGGGEVAERKARLLMDAGADITVNAKEFTPQFDLWAKDGKLKQ AHGEFSPALLEGVWLVIAATDDENVNDLVFQQASERQIFCNVVDAPKRASFIMPSIIDRS PLMVAVSSGGKSPVLARLLREKLEAILPQHLGQLARLAGDLRQQVKDKFSTITLRRRFWE RLFAHDRLAQSLANQDAAMVDKHLTDLFEQPLEQRGEVVLVGAGPGDAGLLTLKGLQQIQ QADVVVYDRLVSDDIMNLVRRDAERIFVGKRAGYHCVPQDEINQILLRNARNGKRVVRLK GGDPFIFGRGGEELEVLADDSIAFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHA KKDTSLDWANLAAEKQTLVFYMGLNQAAEIEAQLIKHGMSKSMPIALVENGTSVQQKVVT GELSALGELALQVESPSLIIVGTVVSLRDKLNWFSAATKK >gi|316917549|gb|ADCU01000023.1| GENE 93 73858 - 74037 213 59 aa, chain + ## HITS:1 COG:no KEGG:SFV_3375 NR:ns ## KEGG: SFV_3375 # Name: yhfL # Def: hypothetical protein # Organism: S.flexneri_8401 # Pathway: not_defined # 3 53 1 51 55 87 80.0 1e-16 MKMNKFIKLSIVAAVLSTLTACTGHIDNKAKNCSYDYLFHPAISISKMIGGCGDVDSQK >gi|316917549|gb|ADCU01000023.1| GENE 94 74315 - 75319 1075 334 aa, chain - ## HITS:1 COG:ECs4226 KEGG:ns NR:ns ## COG: ECs4226 COG0180 # Protein_GI_number: 15833480 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 629 91.0 1e-180 MSKPIVFSGAQPSGELTIGNYMGALRQWVQMQDEYDCIYCIVDQHAITVRQDAQQLRKAT LDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWVLNCYTYFGELSRMTQFKDKSARYAEN INAGLFDYPVLMAADILLYQTTQVPVGEDQKQHLELSRDVAARFNALYGDIFKVPEPFIP KSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVIKKIKRAVTDSDEPAVVRYDVVNK AGVSNLLDILSGVTGKSIPELELEFEGKMYGHLKGAVADAVSGMLTELQERYNRFRNDEA FLQQVMRDGAQKARARAQETVKKVYDAIGFVAQP >gi|316917549|gb|ADCU01000023.1| GENE 95 75339 - 76055 448 238 aa, chain - ## HITS:1 COG:YPO0156 KEGG:ns NR:ns ## COG: YPO0156 COG0546 # Protein_GI_number: 16120499 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Yersinia pestis # 14 237 4 227 232 271 64.0 8e-73 MNSSASAGFSPRLFEKIQAVAFDLDGTLVDSASGLSAAMDKAMKELGLPVPGLARVKNWI GNGADMLVNRALVWADKEPTDALCQRARAAFDFYYASTVETGSQLYPQVKETLAALSHKG YLLAVITNKPTPFVRPLLASLGIDGYFSHIVGGDDVVKKKPHPAPLYLVLAQTGVLASEL LFVGDSRNDIQAAHAAGCPSVGMTYGYNYGEPIERSEPSCVLNQFSELLPLIGLPPLS >gi|316917549|gb|ADCU01000023.1| GENE 96 76057 - 76740 669 227 aa, chain - ## HITS:1 COG:STM3483 KEGG:ns NR:ns ## COG: STM3483 COG0036 # Protein_GI_number: 16766771 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Salmonella typhimurium LT2 # 1 223 1 223 225 380 86.0 1e-106 MKQYLIAPSILSADFARLGEDTAKVLASGADVVHFDVMDNHYVPNLTIGPMVCKALRDYG ITAPIDVHLMVKPVDRIIPDFAEAGASIISFHPEASEHVDRSLQLIKSLGCKAGLVFNPA TSLSYLEYVMDKVDVILLMSVNPGFGGQSFIPATLDKLRQVRKLIDASGRDIRLEVDGGV KVDNIGAIAAAGADMFVAGSAIFGHPDYEQIITQMRGEIAKATAQSE >gi|316917549|gb|ADCU01000023.1| GENE 97 76780 - 77592 405 270 aa, chain - ## HITS:1 COG:YPO0154 KEGG:ns NR:ns ## COG: YPO0154 COG0338 # Protein_GI_number: 16120497 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Yersinia pestis # 1 270 1 271 271 431 76.0 1e-121 MKKNRAFLKWAGGKYPLVDEIRRYLPAGKRLIEPFVGAGSVFLNTDYEEYLLADINADLI NLYNIVKTQPDNFVRDAKVMFSGEFNQSEMFYALRAEFNQSVDPYRRAVLFLYLNRHCYN GLCRYNSRGEFNVPFGRYKKPYFPEAELYWFAQKAQKATFVCEHYTQSMGQAVEGTVVYC DPPYAPLSATANFTAYHTNSFSMTDQMKLAEVASNLSSRQKIPVLISNHDTELTRQWYAQ ADLFVVSARRTISSKVGGRNKVDELLALYS >gi|316917549|gb|ADCU01000023.1| GENE 98 77738 - 78835 681 365 aa, chain - ## HITS:1 COG:YPO0153 KEGG:ns NR:ns ## COG: YPO0153 COG3266 # Protein_GI_number: 16120496 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 16 365 14 329 329 172 50.0 9e-43 MEEEEFKPDEDLKPDASDRRPTRTRKARPAAPKLAVSRQHMMMGIGILVLLVLIIGIGSA LKSPTKSETAQQPSNGGTRDISLSGSSSLSNNTASNTTDEHDGSGVNNSGMIDHSADSGS ATASQPQDVSVPPISGTPTQAAPVQGQQGQQRIDLAGNNMSDALTQQQGQVDSAVQGVDG GVNASTLPTAPATLGSGSVVSKPSSTTTGAVQNIRPVQTKPVATSKPHSGKTTAAKTPTN VANVAKPSANTAKVPTKPVTNSGAVSSAVSGANTSLKGAPASHYTLQLSSASRSESLNAF AKKQNLSHYWVYETTRNGKPWYVLVSGSYSSPAEAKRAVSTLPAEVQAKNPWVRPMAQVQ KDLKK >gi|316917549|gb|ADCU01000023.1| GENE 99 78917 - 80002 870 361 aa, chain - ## HITS:1 COG:STM3486 KEGG:ns NR:ns ## COG: STM3486 COG0337 # Protein_GI_number: 16766774 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Salmonella typhimurium LT2 # 1 360 1 360 362 600 81.0 1e-171 MERITVTLGERSYPITIASGLFEEPASFLPLKAGDQAMLVTNETLAPIYLDRVRHALEQT GVRVDQVILPDGEQYKTLSVMEQVFTALLQKPHGRDTTLIALGGGVIGDLTGFAAACYQR GVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDIDCLKTLPARELAS GLAEVIKYGIILDGEFFVWLEEHLDALLNLEPTAMAYCIRRCCELKAEVVAADETEQGVR ALLNLGHTYGHAIEAEMGYGNWLHGEAVAAGMMMAAHTARRLGQFSEADVARVRTLITRA GLPISGPKSMTPESYLPHMMRDKKVLAGELRLVLPIAIGQSEVRAGVAHEIVLAAIADCR D >gi|316917549|gb|ADCU01000023.1| GENE 100 80044 - 80562 581 172 aa, chain - ## HITS:1 COG:ECs4232 KEGG:ns NR:ns ## COG: ECs4232 COG0703 # Protein_GI_number: 15833486 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Escherichia coli O157:H7 # 1 172 68 240 240 296 94.0 1e-80 MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIERRTGADVSWVFDVEGEEGFR DREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKR PLLQVDTPREVLEDLAKERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN >gi|316917549|gb|ADCU01000023.1| GENE 101 80885 - 82198 493 437 aa, chain - ## HITS:1 COG:YPO0150 KEGG:ns NR:ns ## COG: YPO0150 COG4796 # Protein_GI_number: 16120493 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component HofQ # Organism: Yersinia pestis # 45 426 1 372 374 350 53.0 3e-96 MKRLKYGCCYGCLLWALAFASWATKIRDDTPITLAFSDAPLVNVLQALADNQHLNLIVSE DVKGNTSLKLVDVPWKRAMQAIARLHELSIEQTGNILFVQTMAVVDKRQERVHNKQLQEN AQRPISLTIALQQADVDAVVKNLTQQKGGLLSAQGTVSADPRTNTILVRDLPENTRAVQA WIDELDQPVSQVQLTAHIVTINRESLNELGVRWGTAGSDETTSSDSDSSNFRLNQFNMGL PAEGRSFNAGFQIARIGGRLLELELSALEQEDNVEIIASPHLMATNLQTASIKQGTEIPY EVSSGASGSTSIEFKEAVLGMEVTPRVMRNGKITLTLQITQNMPGRSIKQGDGEALAIDK QEIKTQVTLSDGDTVILGGIFQRQTTHGKTQVPKLGDIPLLGALFRDSTDASKRRELVIF ITPKLVKTETPSSLLRK >gi|316917549|gb|ADCU01000023.1| GENE 102 82113 - 82304 104 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKTLKAKVMPNIQPSGGRLFIRLVVLLRVLQMEQGNEEIKIWMLLWLPAVGVGLCLMGYK NTR >gi|316917549|gb|ADCU01000023.1| GENE 103 82551 - 83066 311 171 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKINSGALEPLICWLCMLSPRRFYFVLLAACLICLIGGRLGLTALAQWMESSTWTAKNGA EMHQERMIKDVLSQRTLLLKISVDTLLLKPLATQCTDLPVGERFAQQINWQKDKNTQEPN SGRWQMNATLNFTQLMQLIDRLAQCARPIMQIELHSEPEMISGQLLVGELS >gi|316917549|gb|ADCU01000023.1| GENE 104 83053 - 83625 310 190 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEQINLCPWYAALRTNRLRKCAQCAIATAILLALVACYVSYSAYRHMHHWRMDIAIYQQR TQRLQQQKTQLLMWSSQAKTQLSQYQRYEKGRESGLQLLALLVDMQRYVPAQIWFTRLSL QSDQLELEGTALTPEAIAVFIERFSKVDSAAGLHLLKMADSGQGQQSFLLQGKIVGWQSD NTQGRSHEDQ >gi|316917549|gb|ADCU01000023.1| GENE 105 83613 - 84455 426 280 aa, chain - ## HITS:1 COG:no KEGG:HDEF_2260 NR:ns ## KEGG: HDEF_2260 # Name: pilM_4 # Def: PilM-like ATPase type IV pilus biogenesis protein # Organism: H.defensa # Pathway: not_defined # 1 271 1 273 278 144 33.0 4e-33 MFARTWQLGIDIQPRTLCAVAITFHRKGWQLKRWWQFSSPINVVESGRLRQSDWLNHLLS ELRSQLPSNTSVRIGLSPEIIMQQSISMPDADVPPSLQQNLLDLAAEKSLLLPRSEFACD YSRQPSSPKDWLMTAVRQQDMQDWMAPLANAGLAPSIADITPCAMRRSAALSRQSPTALL LHVGESVLTWAAPFSQSLAFGYIPREVGEEHSSVVERVTSHAAQYDVPAHSMLCCGAVQS SGWSPFSALTFLQPPLPAQPEMFALAIGLALCAERTSWSR >gi|316917549|gb|ADCU01000023.1| GENE 106 84576 - 87146 2160 856 aa, chain + ## HITS:1 COG:YPO0145 KEGG:ns NR:ns ## COG: YPO0145 COG5009 # Protein_GI_number: 16120488 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Yersinia pestis # 1 856 1 851 851 1448 81.0 0 MKFVKYLIILAVCCILLGAAAVFGLYKYVEPQLPDVATLKDVRLQTPMQVYSADGYLIAQ YGEKRRVPLPLKQVPPQMVNAFIATEDSRFFEHHGVDPVGIFRAASVALFTGHASQGAST ITQQLARNFFLSPERTLMRKIKEAFLAIRIEQLLTKDEILDLYLNKIYLGYRAYGVGAAA QVYFGKTVDQLTLSEIAMIAGLPKAPSTFNPLYSHDRALARRNVVLSRMLDEKYITRAEY DQARNEPLEARYHGPEIDFSAPYLSEMVRQEMVKQYGENAYTDGYKVYTTVTKRLQLAAQ SALRNNVIAYDMRHGYRGPSNVLWKVGQPTWSREQIINSLKTLPTYGPLLPAVVTESNAD EATVMLANGTNVTLPMATVRWARPFKTDRIQGPTPRRVNDVIQAGQQIWVRQDEDQKWWL AQVPDVNSALVSLNPQDGAVKALVGGFDFNQSKFNRVTQALRQAGSNIKPFLYTAAMDKG LTLATILNDLPISRWDAGAGTDWRPKNSPPTYAGPIRLRQGLGESKNVVMVRAMRAMGVD YAAEYLQRFGFPAQNIAHTESLALGSASFTPMQLVRGYAAFANGGYLIDPYFITKILDGE DKVIFEAKPKVVCESCNLPVIYGQTPKSVALTDDNVENVAVSQSGNANSTVPMPQLEQVT AAQASQDSDQQYAPHIISTPLAFLMHDALNSNIWGEPGGGWMGTGWRAGRDLKRHDIGGK TGTTNSSKDAWFSGYGPDIVTSVWIGFDDHRRDLGRTTASGAIKDQISGGEGGAKSAQPA WDDFMKAALEGVPEQKMAPPPGIVSVTIDKYTGKLSSGGAGSKSEYFIDGTQPTEYSVQE AGTTVTDSGGESHELF >gi|316917549|gb|ADCU01000023.1| GENE 107 87225 - 87791 637 188 aa, chain - ## HITS:1 COG:STM3494 KEGG:ns NR:ns ## COG: STM3494 COG0494 # Protein_GI_number: 16766782 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Salmonella typhimurium LT2 # 1 183 12 194 198 271 77.0 3e-73 MEKLPQKPKILSVETIARSRLFNVESVDLEFSNGVRRVYERMRPSEREAVMIVPILGDDL LLIREYAVGIESYELGFPKGLIDPGEDVFQAANRELMEEAGFGAEHFTFMHKLTMAPSYF SSRMNIVLAENLFPERLEGDEPEQMPVVRWPIARMMELLEDPDFREARNVSALFLVRELL ATRTSKAD >gi|316917549|gb|ADCU01000023.1| GENE 108 87724 - 87936 66 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQDEMNTVICIYKVRYGFQIYRMSGPMPVLLAVAESYLIAEKPLIRGHHGKTPTKAKNSQ RGNYRTLTFV >gi|316917549|gb|ADCU01000023.1| GENE 109 88246 - 90360 1066 704 aa, chain + ## HITS:1 COG:no KEGG:ETAE_3269 NR:ns ## KEGG: ETAE_3269 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 32 703 1 672 673 873 63.0 0 MSAPVIASILLSLCLLIAGCVYWFKMKKSALLTTSFPFIKTKLRKLQKDELQAIEQYINK LESSSSSSQASLPVAQHRLMPQGDRVYPLTHAITRYELTTDDPNKRRYYLDNIEVHLPVF WEQYIADDNQLEVIKTHSIPLVISINGHSLVDATQEDFLPPPDNTSSASIRQTESEKVEL QGVRKETLQEYQLSQQGGIRESVVIVIALLMLYTSLISPNAVMPWLLTTATGLIAWGIWR LYSRPSERDLKEVHCIRGIPKRWGLFGESNIGQINNVSLGTLDLIYPAHWQNYIQKDLGQ KTDIEMYLNRQVVRQGRFLSLHDEVKNFPLQRWGRNIVLMSGALLTLALLLSTQPLSIPF KLSSAWLHGNHTVDVNNVKSLAALPLHVGDSLNIQGTGMCHVPDSYQEGTRYPFMPFDCS AIYWSNATPMAAPASDVIDNAAALLSTVNRQLNANNEEQKVNPGLANAIQKSGMILLDDF ADIVLRTEDLCAQESECTRLKNSLVNLGNSRSWNALLKKAQNGGLDGVNVLLRPASAQLL SNIVNSAVSSFYYRETHQAAQSLSATPPGGFLIISDEGKQLVNHPQPAISLYDYTAIDQW RELESLSQQLLSTPFKASGVITEISTDANGTRHIMLHSEPDGLTLWRYILTCILLLAVAL IIVVNAMMFMFRIQKSMNRIPDIQRYYDQCINHSIMPFDTPPRR >gi|316917549|gb|ADCU01000023.1| GENE 110 90456 - 91148 587 230 aa, chain + ## HITS:1 COG:YPO0141 KEGG:ns NR:ns ## COG: YPO0141 COG1011 # Protein_GI_number: 16120484 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Yersinia pestis # 9 230 3 224 226 369 78.0 1e-102 MSLIPNQQPDFNWQEIETVLLDMDGTLLDLEFDSYFWLNLVPQTLSERRGIELDEAKKLI RNEYNAVQHTLNWYCFDYWSERLDLDIYQMTTEVGARARLRQDTQPFLEALRESGRKTIL LTNAHPHGLAVKLEHTGLDQHLDLLFSTHTFGYPKEDQRLWQAIQKRTGFNPATTLFVDD AEPILDAAQSYGIRYCLGVRNPDSSMAEKQFSRHPSMNDYRTLLPAFQLR >gi|316917549|gb|ADCU01000023.1| GENE 111 91211 - 91627 424 138 aa, chain + ## HITS:1 COG:YPO0140 KEGG:ns NR:ns ## COG: YPO0140 COG1188 # Protein_GI_number: 16120483 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Yersinia pestis # 11 134 10 133 135 172 79.0 2e-43 MKGKNEQDDSAIRLDKWLWAARFYKTRAIAREMVDGGKVHYNGQRGKPSKIVEIGAEIKL RQGNDDRTIVVTALTAQRRGAADAQQLYEETAASIENREKVALARKMNALTMPHPDRRPD KKERRTLLKFKNDQASSE >gi|316917549|gb|ADCU01000023.1| GENE 112 91713 - 92594 897 293 aa, chain + ## HITS:1 COG:YPO0139 KEGG:ns NR:ns ## COG: YPO0139 COG1281 # Protein_GI_number: 16120482 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Yersinia pestis # 1 289 1 290 293 420 71.0 1e-117 MSNHDQLHRYLFENMAVRGELVTASHTFQQMLENHSYPAPVQTLLGELLVATSLLTATLK FDGDITVQIQGDGPLKMAVINGNNQQEMRGVARLQGDIAEGSSMREMLGNGVMVITITPN EGERYQGVVGLEGETLAECLEAYFMQSEQLPTRLFIRTGEHNGTACAAGMLLQIMPAQPN NVEDLSHLAQLTATVKSEELFGLPANEVLYRLYHQEEVTLYEPQDVTFRCTCSRERSASA LLTVPVEELNHMLEEDGNIDMHCEYCGNHYVFDKIDIESLFAGGQSHNEDCVH >gi|316917549|gb|ADCU01000023.1| GENE 113 92853 - 94472 1590 539 aa, chain + ## HITS:1 COG:YPO0138 KEGG:ns NR:ns ## COG: YPO0138 COG1866 # Protein_GI_number: 16120481 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Yersinia pestis # 1 539 1 539 539 1013 89.0 0 MHKKGLTPQDLAEYGITDAAEIIYNPSYDLLFQEETAPDLKGYERGTVTNLGAVAVDTGI FTGRSPKDKYIVRDDVTRDTVWWSDQGKGKNDNHPLSVEVWQHLKSLVTKELSGKRLFIV DAFCGANSDTRLSVRFITEVAWQAHFVKNMFIRPTDEELANFKPDFIVMNGAKCTNPQWK EQGLNSENFVAFNLTERIQLIGGTWYGGEMKKGMFSIMNYLLPLKNIASMHCSANVGEKG DVAIFFGLSGTGKTTLSTDPKRQLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIY HAITRDALLENVVVLEDGSVDFNDGSKTENTRVSYPIYHIHNIVKPVSKAGHAKKVIFLT ADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLSLHPTKY AEVLVKRMQAAGAQAYLVNTGWNGTGKRISIKDTRAIIDAILSGEIDNAETFTLPIFNLA VPTALPGVNPDILDPRDTYASKEQWQEKAEDLAQRFVTNFDKYTDTPAGAALVKVGPKV >gi|316917549|gb|ADCU01000023.1| GENE 114 94543 - 95931 1011 462 aa, chain - ## HITS:1 COG:YPO0137 KEGG:ns NR:ns ## COG: YPO0137 COG0642 # Protein_GI_number: 16120480 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 1 445 1 446 450 789 86.0 0 MRRLRFSPRSSFARTLLLIVTLLFVSLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTD KLQLEDGTQLEVPPAFRREIYRELGISLYTNSAAEESGLRWAQHYQFLSQQMAQQLGGPT DVRVEISKNTPVVWLKTWLSPDIWVRVPLTEIHQGDFSPLFRYTLAIMLLAIGGAWLFIR IQNRPLVELEHAAIQVGKGHIPPPLREYGASEVRSVTRAFNQMAAGVKQLADDRTLLMAG VSHDLRTPLTRIRLATEMMSSEDGYLAESINKDTEECNAIIEQFIDYLRTGQEMQTEVCD LNGILAEVVAAESGYERVIDTDFAEGELLVDAHPLSIKRAVVNMVVNATRYGNGWIKVSS GTEGKKAWFQVEDDGPGIAPEQLAHLFQPFVRGESARTTSGTGLGLAILQRIIDGHSGSL DIGTSERGGLRIRALLLTPELTPEPSHSVKNSHKKKDKEPHH >gi|316917549|gb|ADCU01000023.1| GENE 115 95928 - 96647 924 239 aa, chain - ## HITS:1 COG:ECs4247 KEGG:ns NR:ns ## COG: ECs4247 COG0745 # Protein_GI_number: 15833501 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 446 99.0 1e-125 MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPG EDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVL RRQANELPGAPSQEDAVISFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPL SRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA >gi|316917549|gb|ADCU01000023.1| GENE 116 97060 - 97536 446 158 aa, chain + ## HITS:1 COG:greBm KEGG:ns NR:ns ## COG: greBm COG0782 # Protein_GI_number: 16132230 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Escherichia coli K12 # 1 157 1 157 158 265 87.0 3e-71 MKTQLITRGGYEKLKQELDYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR RVRYLTKCLEQLRIVDYSPQQDGKVFFGAWVEVENDEGTIKRFRIVGYDEIFGQKDYISI DSPMARALLKKEVGDAVTVMTPAGEAVWYVNEIEYPKA >gi|316917549|gb|ADCU01000023.1| GENE 117 97641 - 99977 2442 778 aa, chain + ## HITS:1 COG:STM3504 KEGG:ns NR:ns ## COG: STM3504 COG2183 # Protein_GI_number: 16766792 # Func_class: K Transcription # Function: Transcriptional accessory protein # Organism: Salmonella typhimurium LT2 # 1 762 1 761 775 1277 85.0 0 MNDSLSRIIASELQARPEQVDSAIRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLETRLV YLRELEERRATILKSIDDQGKLTEQLAGAINGTMSKTELEDLYLPYKPKRRTRGQIAIEA GLEPLADSLWQDPQQEPDTLAANFVDADKGVADTKAALDGARYILMERFSEDAALLAKVR NYLWKNAHLVSKVVEGKEEEGAKFRDYFNHHEPIANVPSHRALAMFRGRNEGVLQLSLNA DPQFDEAPRESYCEQIIIDHLGLRLNNAPADAWRKAVVNWTWRIKVLLHLETELMGTLRE RAEDEAINVFARNMHDLLMAAPAGMRATMGLDPGLRTGVKVAVVDGTGKLVATDTIYPHT GQAAKAAAVVAALCIKHNVELVAIGNGTASRETERFYLDVQRQFPEVKGQKVIVSEAGAS VYSASELAAQEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR KLDAVVEDCVNAVGVDLNTASVPLLARVAGLTRLMAQNIVGWRDENGRFSNREQLLKVSR LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATRQSLQELMGNPTELRNLK ASEFTDERFGVPTVTDIIKELEKPGRDPRPEFKTATFADGIETMNDLQPGMILEGSVTNV TNFGAFVDIGVHQDGLVHISSLADKFVDDPHKVVKAGDIVKVKVMEVDMQRKRIALTMRL DEQPGEGGSRRGSAERTTERQRPANGNARPARNDKKQDSGNNSAMGDALAAALGKLKR >gi|316917549|gb|ADCU01000023.1| GENE 118 100665 - 100949 203 94 aa, chain + ## HITS:1 COG:ECs4250 KEGG:ns NR:ns ## COG: ECs4250 COG1918 # Protein_GI_number: 15833504 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Escherichia coli O157:H7 # 3 74 2 73 75 96 69.0 8e-21 MHQLIPGHQYKIIGFSPLISPAYRQKLLSLGFLPGSPFSVVRIAPLGDPIEVKSRRVSLV LRKKDLELLTIESMPLDDKTKTSVMTPQITANGA >gi|316917549|gb|ADCU01000023.1| GENE 119 101063 - 103378 1754 771 aa, chain + ## HITS:1 COG:YPO0132 KEGG:ns NR:ns ## COG: YPO0132 COG0370 # Protein_GI_number: 16120475 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Yersinia pestis # 1 771 1 771 771 1174 77.0 0 MKQLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGHFTTQEHQVKLVDLPGT YSLTTISEQTSLDEQIACHYILSGDADLIINVVDASNLERNLYLTLQLLELGIPCIIALN MLDIAHSQQIEIDIEALSHRLGCPVIPLISTRASGIVELKKAIDLPPTCAVEALVEYPPL LLGQVDRLSQAMPDTLAVQQRRWLALQLLEGDIYSSTRASNALKILPEVQETLKRTLNED PALIIADSRYQSITDICDSVSNTTTALPNILTEKLDRIILNRWLGIPIFLLVMYIMFVLA INIGGALQPLFDVGSSTIFVQGLQWLGYTLHFPEWLTIFLAQGVGGGINTVLPLVPQIGM MYLFLSFLEDSGYMARAAFVVDRMMQALGLPGKSFVPLIVGFGCNVPSVMGARTLDAPRE RLITVLMAPFMSCGARLAIFAVFSAAFFGQGGALVVFSLYMLGIVMAILTGLMLKHTIMR GEASPFVMELPVYHVPHLKSLLLQTWQRLKGFVLRAGKVIIIVSIFIGALNSFSFSGKAV DSINDSALASVSKVMTPLLQPIGVHSDNWQATVGLVTGAMAKEVVVGTLNTLYTAEQIHE EEFDPAAYSLIGGLEEAVGETWQSLKDTFSLSVFANPIEASKGDGEMESGSMGVMGSKFG SASAAYAYLIFVLLYVPCVSVMGAIARESSRGWMTFSILWGLNVAYSLATVFYQVANFTS HPQYSSIAIALVVIFNALVLVALRRSRDRVSVRLVNDPASCCCNTSKGSCH >gi|316917549|gb|ADCU01000023.1| GENE 120 103417 - 103665 246 82 aa, chain + ## HITS:1 COG:no KEGG:ETAE_3285 NR:ns ## KEGG: ETAE_3285 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 82 2 83 83 119 73.0 4e-26 MASLLKVRDTVALHGRIELNQLCREVNGSPAMVLAMLERLEQMGCVEKVEDIDNGCVSGS CKGCPETSKNCETVVYKTKGVH >gi|316917549|gb|ADCU01000023.1| GENE 121 103863 - 104633 555 256 aa, chain - ## HITS:1 COG:YPO0129 KEGG:ns NR:ns ## COG: YPO0129 COG0596 # Protein_GI_number: 16120472 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Yersinia pestis # 1 249 1 249 258 374 69.0 1e-104 MNELYWHTCGEGDRDLVLLHGWGLNAEVWRCILPRLSTQFRVHLVDLPGYGRSQGFGALT LAQMSDLVIRQAPEKAIWLGWSMGGLVASDIALRYPERVSALITVSSSPCFTAREGWPGI KNEVLSGFQHQLSEDFKRTVERFLALQTLGTESARQDARILKDVVLTQQMPSVEVLNGGL DILRTEDLREQIAGLSMPLLRIYGYLDGLVPRKVAALLDESCPKSESVVIQKSAHAPFVS HPAEFCEVVETWVRGA >gi|316917549|gb|ADCU01000023.1| GENE 122 104678 - 105361 -2 227 aa, chain + ## HITS:1 COG:ECs4254 KEGG:ns NR:ns ## COG: ECs4254 COG1040 # Protein_GI_number: 15833509 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Escherichia coli O157:H7 # 1 227 17 243 243 212 51.0 6e-55 MFIISARCWICQLPLRVPIQGICSFCTSASLNTLSVCPRCGLPNGDPKRVCGRCIQKPPY WQQLIFVSDYQPPLSQLIHRLKYQGKWQIGSALARLMLLSYLDARRTRLLPTPDLVTIIP LHRQRQWRRGFNQSDRLAKPLARWLQCPYSPELLKRTRNTRPQQSLSAVRRRRNLRNAFT CQQNPSGKHILLVDDVFTTGSTIGEVSRLLIAQGAKSIQVVCLCRTL >gi|316917549|gb|ADCU01000023.1| GENE 123 105420 - 105995 791 191 aa, chain + ## HITS:1 COG:YPO0127_2 KEGG:ns NR:ns ## COG: YPO0127_2 COG0694 # Protein_GI_number: 16120470 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin-like proteins and domains # Organism: Yersinia pestis # 97 191 1 95 95 182 91.0 3e-46 MIRITEAAQEHFAKLLANQEAGTQIRVFVINPGTPTAECGVSYCPPDAVEANDTKLDFEK LSAYVDDVSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVDDDAPLIERVEYVLQSQIN PQLAGHGGKVTLMEITEDGIAILQFGGGCNGCSMVDYTLKEGIEKELLQKFPELKGVRDL TEHERGEHSYY >gi|316917549|gb|ADCU01000023.1| GENE 124 106075 - 106830 591 251 aa, chain - ## HITS:1 COG:ECs5167 KEGG:ns NR:ns ## COG: ECs5167 COG1349 # Protein_GI_number: 15834421 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 397 78.0 1e-110 MTESQRHQLLLEMLQQTGFVTVEQVIDRLQVSPATARRDINKLGESGKLKKVRNGAEAVS QNRVAWTPMNIHQAQNHEEKVRIARAASQLVKPGESIVINCGSTAFTLGREICGKDAQVI TNYLPLANFLIEQEHDSVVIMGGQYNRSQAITLAPQEGESSLYAGHWMFTSGKGLTAEGL YKTDMLTAMAEQKMLNYVGKLVVLVDSSKVGQRAGMLFSRAEQIDIVITGKAADEKVIEQ LKAQGVEVILV >gi|316917549|gb|ADCU01000023.1| GENE 125 106967 - 108031 980 354 aa, chain - ## HITS:1 COG:STM4382 KEGG:ns NR:ns ## COG: STM4382 COG2220 # Protein_GI_number: 16767628 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Salmonella typhimurium LT2 # 1 354 1 354 354 717 93.0 0 MSKIESISRESWILSTFPEWGSWLNEEIEQEKVVPGTFAMWWLGCTGIWLKSEGGANICV DFWCGTGKQSHGNPLMKDGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLSTHDHN DHIDVNVAAAVMQNCDSSVPFIGPQTCVDLWVGWGVPRERCIVMKPGDVVKIKDVEILAL DAFDRTALITLPANEKAAGVLPDGMDKRAVNYLFKTPGGNLYHSGDSHYSNYYAKHGNEH KIDVALGSYGENPRGITDKMTSSDILRMAESLKTKVVIPFHHDIWSNFQADPQEIRVLWE MKKDRLKYGFKPFIWQVGGKFTYPLDKDNFEYHYPRGFDDCFTIEPDLPFKSFL >gi|316917549|gb|ADCU01000023.1| GENE 126 108474 - 109874 1413 466 aa, chain + ## HITS:1 COG:STM4383 KEGG:ns NR:ns ## COG: STM4383 COG3037 # Protein_GI_number: 16767629 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 464 12 476 476 743 90.0 0 METLYNIFTIFFNQVMTNAPLLLGIVTCLGYLLLRKSATVIIKGTIKTIIGFMLLQAGSG ILTSTFKPVVAKLSEVYGINGAISDTYAAMMATVERMGDAYSWVGYAVLLALALNILYVL FRRITGIRTIMLTGHIMFQQAGLIAVFFYIFGYPMWTTIVCTAILVSLYWGITSNMMFKP TQDVTDGCGFSIGHQQQFAAWIACKVAPYLGKKEESVEDLKLPGWLNIFHDNIVSTAIVM TVFFGAILCSFGIDTVQQMAGKTHWTIYILQTGFQFAVAIFIIIQGVRMFVAELSEAFNG ISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVGIGSSIMIIPGFIPM FFSNATIGVFANHYGGWRAALKVCLIMGMIEIFGCVWAVKLTGLSAWMGMADWSILAPPI MQGLTFGLWFMGVIIAIALIYMFFAGRSLRAEEDAEKAALNKSSAN >gi|316917549|gb|ADCU01000023.1| GENE 127 109893 - 110198 341 101 aa, chain + ## HITS:1 COG:ECs5170 KEGG:ns NR:ns ## COG: ECs5170 COG3414 # Protein_GI_number: 15834424 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Escherichia coli O157:H7 # 1 101 1 101 101 180 90.0 5e-46 MTVRILAVCGCGQGSSMIMKMKVDQFLTQQNIDHSVNSCAVGEYKSELSGADIIIASTHV ADEITVTGNKYVVGVRNMLSAADFGPKLMDVIKEHFPKDIK >gi|316917549|gb|ADCU01000023.1| GENE 128 110210 - 110677 537 155 aa, chain + ## HITS:1 COG:STM4385 KEGG:ns NR:ns ## COG: STM4385 COG1762 # Protein_GI_number: 16767631 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Salmonella typhimurium LT2 # 1 152 1 152 154 281 91.0 3e-76 MKLRDSLAQNHSIRLQAEASTWQEAVKIGVDLLVQADVVEPRYYQAILDGVERFGPYFVL CPGLAMPHGRPEEGVKKTGFSLVTLKTPLSFNHEDNDPVDILITMAAVDAHTHQEVGIMQ IVNLFEDEANFDRLRACRTEQDVLDLIDRANAVQA >gi|316917549|gb|ADCU01000023.1| GENE 129 110799 - 111455 653 218 aa, chain + ## HITS:1 COG:STM4386 KEGG:ns NR:ns ## COG: STM4386 COG0269 # Protein_GI_number: 16767632 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Salmonella typhimurium LT2 # 4 218 2 216 216 397 93.0 1e-111 MSHSLPMLQVALDNQTLDDAYKTTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKI VLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDTAKEFNGDVQIELTGYWT WEQAAEWRSAGIQQVVYHRSRDAQAAGVAWSDADIASIRRLADMGFKVTVTGGLALEDLP LFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAQLWG >gi|316917549|gb|ADCU01000023.1| GENE 130 111466 - 112326 834 286 aa, chain + ## HITS:1 COG:ECs5173 KEGG:ns NR:ns ## COG: ECs5173 COG3623 # Protein_GI_number: 15834427 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli O157:H7 # 1 280 1 280 284 502 87.0 1e-142 MLQKAVPLGIYEKALPAGEDWLPRLQLAAELGFDFVEMSLDESDVRLARLDWSREQRLAL VNAIAQTGVRVPSMCLSAHRRFPLGSEDDAVRDQGLEIMRKAICLAQDVGIRVIQLAGYD VYYQTANNATRERFRDGLKQSVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWF QLYPDIGNLSAWDNDVQMELQAGSGHIVAVHVKDTQPGKFKNVPFGTGVVDFERCFATLK ESGYSGPYLIEMWSETAANPIMEVKAARDWVKQRMANAGLAVEEVA >gi|316917549|gb|ADCU01000023.1| GENE 131 112326 - 113012 564 228 aa, chain + ## HITS:1 COG:ECs5174 KEGG:ns NR:ns ## COG: ECs5174 COG0235 # Protein_GI_number: 15834428 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 400 83.0 1e-112 MQSLKQQVFDANMALPHYGLVTFTWGNVSAIDRERGIVIIKPSGVPYDTMKADDMVVVDL QGNIVEGNYRPSSDTPTHLELYRRYPHLGGIVHTHSTHATAWAQAGLSIPALGTTHADYF FGDIPCTRALTIDEVAGDYELNTGKVIVETLGDTNPMHTPGIVVYQHGPFAWGKDALDAV HNAVVMEEVAKMAWIACGINPHIRPIDHYLMNKHFSRKHGPNAYYGQQ >gi|316917549|gb|ADCU01000023.1| GENE 132 113040 - 113603 469 187 aa, chain + ## HITS:1 COG:ECs0317 KEGG:ns NR:ns ## COG: ECs0317 COG3477 # Protein_GI_number: 15829571 # Func_class: S Function unknown # Function: Predicted periplasmic/secreted protein # Organism: Escherichia coli O157:H7 # 5 182 2 200 204 237 59.0 8e-63 MSVKDLFVQTDPARRRYGVATLVGFAAGIMSAFVKWGAEVPLPPRTISDGRAEFNPPYLF LRDYLGVDPTSTVYTFSEHIINPVMVTHILFSLVFAIGYCIVAERFPKVKMWQGVMAGII CTIAVHGISFPLLGLTPPLSQLPADEYLSEIFGHIVWFWAIELIRRDLRNRITHEPDAEV PLDAPYR >gi|316917549|gb|ADCU01000023.1| GENE 133 113685 - 114488 739 267 aa, chain - ## HITS:1 COG:YPO3829 KEGG:ns NR:ns ## COG: YPO3829 COG0561 # Protein_GI_number: 16123964 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Yersinia pestis # 1 267 1 267 269 470 81.0 1e-132 MYHIVASDMDGTLLSPAHTLTPFARETLQQLTQLGVNFVFATGRHHIDIAQVRDSLGISA FMITSNGARVHNTAGELIFSHNVDEDIARDLYTIVHDDPEILTNVYRNDDWFMNRESPEQ REFFQESVFHYQVFEPALLPTDGICKVYFTSETHEKLLPLEEAINARWGDRVNVSFSLPT CLEVMAGGVSKGHALEYVAKLLGYTLKDCIAFGDGMNDMEMLSMAGKGCIMRDSHQRLKD ALPNLEVIGSNVDDAVPHYLRKMYLDK >gi|316917549|gb|ADCU01000023.1| GENE 134 114505 - 115530 819 341 aa, chain - ## HITS:1 COG:YPO3830 KEGG:ns NR:ns ## COG: YPO3830 COG2267 # Protein_GI_number: 16123965 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Yersinia pestis # 7 332 9 334 337 453 64.0 1e-127 MSALTQSWLQRENEFAAFTTGPLLDFWQQRQEDVFMGVDDVSIRFVRFTSEQHTRVILIS PGRIESYMKYPELAYDLFHSGYDVVIVDHRGQGKSGRMLEDHHRGHVVRFDDYVDDLEIL WQQEILSKPYQRRFALAHSMGGAIMALFLARKPQGVDAAALCSPMTGIKLPMPLWLAKRI TDWAERYPTMRDNYALGTGHWRPLPFIVNELTHSRVRYRRFLRYYADYPELQVGGPTYHW VRESIQAGERAIAQAKNIVTPLLLLQAGGDRVVTNASHFAFCQALSKAGNPPYGGVPHII QGARHEILFERDAQRSEALNAILDFYALHTDSQAETAANPS >gi|316917549|gb|ADCU01000023.1| GENE 135 115707 - 115952 79 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLGCGEENRANGVEVALFNHALHENGADHSAPTDKTNVFHMLSYLGGFYINKKLNKTLKP PVCAVGLAPLTKLTKCVTMRK >gi|316917549|gb|ADCU01000023.1| GENE 136 115833 - 116936 1112 367 aa, chain + ## HITS:1 COG:YPO3949 KEGG:ns NR:ns ## COG: YPO3949 COG0136 # Protein_GI_number: 16124077 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Yersinia pestis # 1 367 1 367 367 677 88.0 0 MKNVGFIGWRGMVGSVLMQRMIEERDFDAIRPVFFSTSQHGQPAPTFTGQQGTLQDAYDI DALTALDIIITCQGGDYTNDIYPKLRASGWQGYWIDAASSLRMNEDSVIILDPVNHDVIH DALDRGIKTFAGGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMG MLHNSVAKELQNPASAILDIERKVTELGRSGTLPTDNFGVPLAGSLIPWIDKALDNGQSK EEWKGQAETNKILATKEIIPVDGLCVRVGALRCHSQAFTIKLKKDVEIPEIEQILASHND WVKVVPNDRELSMRELTPAAVTGTLSTPVGRLRKLNMGPQYLSAFTVGDQLLWGAAEPLR RMLKFVL >gi|316917549|gb|ADCU01000023.1| GENE 137 116988 - 118682 1490 564 aa, chain - ## HITS:1 COG:YPO3943 KEGG:ns NR:ns ## COG: YPO3943 COG3275 # Protein_GI_number: 16124071 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Yersinia pestis # 1 558 1 558 565 877 79.0 0 MGVSQIDLILSLLQQMCVYLVIAYLLSKTPLFIPLMQVTIRLPHKLVCYLTFSMFCIMGT YFGLHIDDSIANTRAIGAVLGGVLGGPSVGFLVGLTGGLHRYSMGGMTAMACMISTVVEG LVGGLLHRYMLKNNRLDLLFQPLVIAAITFLAECLQMLIILIVARPFWEAEELVENIALP MMITNTVGAAMFMQILLDRRAIFEKYTSAFSSKALQIAARAEGVMRQGFNPKNSMKVARV LYEELGVGAVAITDREKLLAFIGIGDDHHLVGAPITSHHTHRAIELDQVVYADGNEVAYQ CSITPNCKLGSTLVIPLRGEDNRVVGSIKLYEPKNKLFSSINRTLGEGIAHLLSAQILAG KYEQQKQLLVQSEIKLLHAQVNPHFLFNALNTLSAVIRRDPNHARKLVLSLSTFFRKNLK RSSDEVTLGDEIEHVKAYLEIEKARFADHLMIDFDIDESLLNERLPAFSLQPIVENAIKH GTSQLFGVGEVRLHSWCDGEDILISIEDNAGLYQSKPRGDGLGMNLVDRRIKARYGERFG VSVETEADKFTRIVVRVPKSVAEV >gi|316917549|gb|ADCU01000023.1| GENE 138 119159 - 119662 385 167 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229877854|ref|ZP_04497362.1| acetyltransferase, ribosomal protein N-acetylase [Sphaerobacter thermophilus DSM 20745] # 1 167 1 167 179 152 49 7e-36 MIEIIIRAATPLDVEELHKLHTHPQVYAQTLQLPYATTEIWEKRLVHTPVGHYHLVAVCE DRIVGCISLEAYQRPRMRHSGTFGMSVHYDFQGQGVGRKLMTAMVELADKWLDLKRIELT VYTDNAGAIALYKKFGFEIEGTSRGYAYRDGQYVDVFHMARLRTLTH >gi|316917549|gb|ADCU01000023.1| GENE 139 119642 - 120280 170 212 aa, chain - ## HITS:1 COG:ZrcsB KEGG:ns NR:ns ## COG: ZrcsB COG2197 # Protein_GI_number: 15802770 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 EDL933 # 67 202 71 207 216 68 33.0 7e-12 MLRVALVETSYVDAMGIYSCLKGIKVKCQLFDLCSQFISEQRLKPFDALIIEIVPFEYGL SGALDTLQLLKVSFPNLPVIVLTRSEDPYVLSRVMSYKTYTLLSKQEPLSVLREAIMHHL FSGAVVRSDAIRRFLEKSMGQDSVQITRSEERVMSCLQQGQSIGEIARRLKVSEKTISGH KRSAMRKLGLTNHANFCRYLVSHKAVLVGERT >gi|316917549|gb|ADCU01000023.1| GENE 140 121003 - 121587 408 194 aa, chain + ## HITS:1 COG:no KEGG:ECL_02072 NR:ns ## KEGG: ECL_02072 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 3 190 96 283 294 115 32.0 6e-25 MFFLRVGGRLNVSKSEKDKRILLFNPTEKGLNETRRYLANSLAIFPELLPNYRLEKNHLD SYEGLEKFFIRCAELFFNDVIVSNILPDSQIFLLKDAGHMIFIRLYLEALKQKENPGVAT TISYSKIAKETSVSRTHLRRIVDAAAKKSLMTPHENMTLTLHDSFITLAEEYMGLYFAFV LYCLEINPSDEISI >gi|316917549|gb|ADCU01000023.1| GENE 141 121653 - 122363 301 236 aa, chain - ## HITS:1 COG:YPO3881 KEGG:ns NR:ns ## COG: YPO3881 COG3121 # Protein_GI_number: 16124014 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Yersinia pestis # 14 236 19 248 248 170 43.0 2e-42 MRRFLSVFSSFIGGVFFILLASESTQAAVNAEATRVVFNDGETEASLQLVNKNSYPVVVQ AWSDNGDPQSTPDKSTSPILVLPAVFKLQPEEMKSLRLMVIDSTLPKERESMYWLNIYEI PPRMSGESTQKVTIALRTQMKLFLRPSGISHLQESVGNKIRFQRQNGVLNIENPTQYYLS IIGVTIRNIPLDIGVLPPKSHRQIPLPPTLNTMNETISFSLINDEGNSWDYTRAIK >gi|316917549|gb|ADCU01000023.1| GENE 142 122335 - 123642 934 435 aa, chain - ## HITS:1 COG:no KEGG:YE0158 NR:ns ## KEGG: YE0158 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 18 435 37 455 455 459 56.0 1e-127 MFGIKVRAGMISTFFLLMMSSSAIAQCTKITAQSQLSSTNDGVGALWYGSLDYNNGSLGL PSVVDISTSNDFQPDGTLLASSVAPFTSYAVNSGYVSEQVLFRCDAADAGKVYEVYATNG DAVYAGMYDDGSITGVAPKAYATYVRNIAIRFTNMETGEFYDKIWKSRPLTGLDTDSQGR LLVKAKNFSAVQTEIFRLNYARSGTNNAASYLYAYTQPNAYIAFRGPGITGPADGADSQT SFPGWYGTWPASIGLYNYVTFRRGATCKVSNFTPVVTLPAINISALQAGEVSQSPFTLDF QCQSAATSGLKTGQIALGFLAPPASVAAATKYGLITSGAANYLLDEQYGAAGHARGVGVK IYRSNQPMQFLTTDTTKTTGWSPILGGDQTLVDSNTAQGINSYTETFMAQLEKFGGDELT AGSYQAHAQILIRIQ >gi|316917549|gb|ADCU01000023.1| GENE 143 123653 - 126232 1625 859 aa, chain - ## HITS:1 COG:YPO3879 KEGG:ns NR:ns ## COG: YPO3879 COG3188 # Protein_GI_number: 16124012 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Yersinia pestis # 25 856 37 873 875 822 51.0 0 MNHRKIASWVTYALFPMSVCSWAAENSQYTFDESLFLGGDFGKGLKRFNADNNTPAGKYS VDIYLNGRFIQRDSVDFVNNLAQKESEPCLSREFYVQSGVNESALPQGDELAKSQCKSPE TLLKGASWSFDQPRLRLDLYIPQALLTRSPRDAVPVESWDAGESLMFLNYSTNYYQSRYR SGSGGTSQYGFLGLKSGINLGLWQLRQQSSATYSQSPSRSRYQWQSLQTYMQRPIAALDS NLMIGQSYSGGSLFGSMAYNGVKLETDQRMWPQSRRGYAPEIRGTAQTNARVVVSQNGRT IYETNVPQGPFVIDDLSSTHYEGDLKVEIIEADGRSSTFTVPFSAVPDSMRPGVSRYNAV VGRARDYGDTQNLFGDFTYERGISNSFTGNLGLRIADDYQAILAGGVWSHWLGAFGLNTT WSHAQIDDNQSQSGWRVQASYSRTFDYTGTNVALAGYRYSTEGYRELSDVLGERASKKHG SNNVFKSDTLNQRNQFTAMINQSLGDYGSLYLSGSVMDYYDNQSRNTQLQVGYSNSWKNI SYNLAISRQQSVYRNQIDMDGSEQGRSRSYLGNTENLITLTFSIPLSFGGRDNYISTSLS HADSSGNSGQTSVSGMLDDAGTLNYSVYAGYQQNRESQAGSTKNWGANLQKNSAFGTLNG SYSASSDYTQWGVGGRGAAVIHRGGITLGPYLSETFGLVEAKGAKGALVKNGQGARIDSN GYAIVPSLTPYRYNTISLDPKGINKHTELKSTQSRVIPYAGAAVKASFDTLSGYGVLIKA KINGTEALPMGASVLDDQNNVVGMSGQASLIYARVRERQGILTVKWGDSPQEMCRVSYVL PESSEQQELVSVAGQCVVH >gi|316917549|gb|ADCU01000023.1| GENE 144 126273 - 126986 141 237 aa, chain - ## HITS:1 COG:YPO3878 KEGG:ns NR:ns ## COG: YPO3878 COG3121 # Protein_GI_number: 16124011 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Yersinia pestis # 21 237 25 243 243 212 48.0 4e-55 MLFVRNVIAGCTFALLWIVAAQASVVMTGNRVIYPAQNKEVNIQLTNHDDFPNVIQVWMD SGNEDSTPDTGQAPFIITPPFFKMAAKAGQTVRLMFSGGVLPQDRESIFYLNFLQIPPRE AKSSSNQMLIMLRNRVKVFYRPAGIATSPADIAQNVKPKIIQQGNSYVLEVNNNSGYYLS ISGASILSENKVTQLGSRMIAPFSTERWPLSHRFSNSALTINYINDQGAKITQRYQL >gi|316917549|gb|ADCU01000023.1| GENE 145 127035 - 127574 468 179 aa, chain - ## HITS:1 COG:YPO3877 KEGG:ns NR:ns ## COG: YPO3877 COG3539 # Protein_GI_number: 16124010 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Yersinia pestis # 1 178 1 175 176 149 57.0 3e-36 MNKTILPIAFIAGCFVSSSAMAISANTITFQGEVTAQTCSVSINGNDASPIVLLPTVAAT ELANPGDVAGQTVFTLGVTGCTKNDAADTNIKTVFVGNNVTNSGNLGNTGGAGNVELQIL KSTQDTAGINLTSPQSVDGLVLKKGDTEATHDFAVQYYATAAATAGTVAGSLQYAISYQ >gi|316917549|gb|ADCU01000023.1| GENE 146 128993 - 131701 2368 902 aa, chain + ## HITS:1 COG:YPO1661 KEGG:ns NR:ns ## COG: YPO1661 COG0474 # Protein_GI_number: 16121926 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Yersinia pestis # 5 902 4 899 899 1423 80.0 0 MAQMIEQTAEKRSRKNNKKATYLIAEESVVSLDATLSNLSSNLNGLEEEDARERLLETGP NQVAHEKVPPALVQLISAFNNPFIFVLMVLAAISFFTDYWLPLQRGEETDLIGVIIILIM VSLSGLLRFWQEFRTNKAADALKSMVRTTATVLRRAHPAAKTECKEIPLQDLVPGDIILL SAGDMVPADVKLIESRDLFISQAVLTGEAIPIEKYDVTASVSQKSCDTGSSEGDLLELSN ICLMGTNVASGTAKAVVVATGAKTYFGSLAKSIVGTRSQTSFDRGVNSVSWLLIRFMLVM VPVVLLINGFTKGDWADAALFALAVAVGLTPEMLPMIVSSNLAKGAIAMSRRKVVVKRLN AIQNFGAMDVLCTDKTGTLTQDRIILEHHIDINGRENKEVLQLAWLNSYHQSGMKNLMDK AVIRFGRARPEVEAMARFSKIDELPFDFIRRRLSIVVSDEHRRHTLICKGAVEEMLAIAT HISDDGNILPLDEKARAELLQLATHYNEQGFRVLMVGTRDLGIDGCVFPLSNSDERDLVI CGLLTFLDPPKASAAEAITALRENGVMVKVLTGDNPIITSKICRDVGLEPGEPLLGSEIE GMSDEQLSLLAEQRTVFAKLTPLQKSRVLKALQGNDHTVGFLGDGINDAPALRDADVGIS VDTGTDIAKESADIILLEKDLMVLEEGVITGRETFGNIIKYLNMTASSNFGNVFSVLVAS AFIPFLPMLAIQLLLQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSS IFDITTYAIMWFVFAANSIEHQALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPV MLTTGLIMALGIYIPFSPLGTWVGLQPLPWQYFPWLVGTLFSYCVVTQLMKRFYIRRFGQ WF >gi|316917549|gb|ADCU01000023.1| GENE 147 131906 - 132481 674 191 aa, chain + ## HITS:1 COG:no KEGG:ROP_53400 NR:ns ## KEGG: ROP_53400 # Name: not_defined # Def: hypothetical protein # Organism: R.opacus # Pathway: not_defined # 1 191 1 190 192 248 61.0 1e-64 MQAFWEDRLIIADLMTGWMHRDLAEWDKMLELFHTDGTIEVTWFEGLFTDFVKGSQRMGG SALVTKHLISSPMIEFHGDKAIAETNAMIVIENAQMRLGATVHNRFYDWVEKRNGVWKIT RRQAIYDFGSFNFPQGIIDIDTACANKYPIAYAPLAYLLEKSGFPVEREFATKGSHLETT MKDEGQAWLKG >gi|316917549|gb|ADCU01000023.1| GENE 148 132528 - 133724 1028 398 aa, chain - ## HITS:1 COG:YPO3966 KEGG:ns NR:ns ## COG: YPO3966 COG2081 # Protein_GI_number: 16124094 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Yersinia pestis # 1 396 1 395 398 682 82.0 0 MENFDVVIVGAGAAGLFCAAQAGQLGQRVLVVDNGKKAGRKILMSGGGRCNFTNMYAEPA AYLSQNPHFCKSALARYTQWDFIELVSRYQIAYHEKTLGQLFCDDSAEQIVDMLLKECEL GQVTLRLRSEILSVERLDSGEFSLQLNGEQVNCRSLVIASGGLSMPGLGATPFGYKIAEQ FGLNVLPTRAGLVPFTLHKPLLDHLQTLSGVAVPSVVTAESGTSFRESILFTHRGLSGPA ILQLSSYWQAGEKVTINLLPDCDLAAFLDAERTEHPNQSLKNTLAKQLPKRLVECLQTLG QIPDVTLKQLNAPQQVQIVETLQEWQVVPNGTEGYRTAEVTLGGVDTHELSSKTMQAHKV PGLFFIGEVVDVTGWLGGYNFQWAWSSAWACAQAVANV >gi|316917549|gb|ADCU01000023.1| GENE 149 134048 - 135541 1382 497 aa, chain + ## HITS:1 COG:YPO3967 KEGG:ns NR:ns ## COG: YPO3967 COG0306 # Protein_GI_number: 16124095 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Yersinia pestis # 1 496 1 498 498 776 82.0 0 MLHLFAGLDFHTGLMLVLALLFVLFYEAINGFHDTANAVATVIYTRALRSQIAVVMSGIF NFLGVMLGGLSVAYAIVHLLPTDLLLNVGSTHGLAMMFSLLLAAIIWNLGTWYFGLPASS SHTLIGAIIGIALTNALMTNTSVVDALNIPKMIEIFLSLILSPLIGLVLAGLMVFALRRY WSGTKKRRRIHMTPAEREKIDGKRKPPFWTRIALILSAVGVSFSHGANDGQKGIGLLMLV LIGVAPAGFVVNMDATGYDITRTRDAITHLEQYYQKHQEALPHIVGIEEHQPVAPTTGNN DFHCDSSRALIAIDHSKALLNNLQRYDELSVDQRNQMRRLLMCVADTAGKVAKLPETDAQ DKRFLNDLRKDLLETVEYAPMWIIVAVALALSLGTMIGWRRVATTIGEKIGKKGMTYAQG VSAQMTAAISIGVASYTGMPVSTTQVLSSAVAGTMIVDGGGVQSKTIKSILLAWVLTLPV AIVLSGGLYWLALTFVV >gi|316917549|gb|ADCU01000023.1| GENE 150 135594 - 136907 1030 437 aa, chain - ## HITS:1 COG:BS_yocR KEGG:ns NR:ns ## COG: BS_yocR COG0733 # Protein_GI_number: 16078994 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Bacillus subtilis # 2 433 4 439 445 273 40.0 4e-73 MSQQWSSRIGHILAAAGSAIGIGAIWKFPYVSATNGGGAFLIVFLVFSFTLGLAVFMAET LLGSHTREGVVKAFKQLAGRHWGWVGVLGVTCSWCIFSFYSVVGGWTVGYTFMAGAGKLN ITDSSQLNSLFTDFISNPYLPVITHLLFAALTCYVVLGGVQRGVEKAVKVMMPLLFLIML VLIVVGMTLPGSSAGLKMFLYPDFSHLTGKSVLDALGLAFFSLSIGLGIHVTYGAYLPDS RGIGRSSVWVVTLSCLVCVLAGLMIFPALSSAGLDPAAGPGLTFMTMPVFFAHLPGGSIL AVAFFLLLLVAALSSSISLLENIVAFAQGRWGWSRRNASLIITASIMLAGIPVTLSFGEL SGFTLAGKTLFDVLDFLTSNLMMPLFGIIICLVFGWSPRAATLVPQDISPFWRACLRITW RYIGPLFIGIILIRGLM >gi|316917549|gb|ADCU01000023.1| GENE 151 137272 - 137607 344 111 aa, chain - ## HITS:1 COG:no KEGG:ETAE_3349 NR:ns ## KEGG: ETAE_3349 # Name: uspB # Def: universal stress protein # Organism: E.tarda # Pathway: not_defined # 1 111 1 111 111 184 85.0 6e-46 MINTVALFWALFLVCVINMLRYYSSLRALLVVLRGCDPLLYQYVDGGGFFTSHGQPSKQV RLVRYIQAQRYLDHHDDEFIRRCERLRRQFVLTSGLCGLVVVCLCAMAIWY >gi|316917549|gb|ADCU01000023.1| GENE 152 138331 - 138768 540 145 aa, chain + ## HITS:1 COG:ECs4367 KEGG:ns NR:ns ## COG: ECs4367 COG0589 # Protein_GI_number: 15833621 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 144 1 144 144 259 93.0 2e-69 MAYKHILVAVDLSPESNILVEKAVSMARPYDAKVSLIHVDVNYSDLYTGLIDVNLGDMQK RISDETHHALTELSQNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVLCGHHQDFWSKLM SSARQLINTVHIDMLIVPLRDEDED >gi|316917549|gb|ADCU01000023.1| GENE 153 138973 - 139173 147 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPIVVRSVKTGMMRRGHPRSGLEGGAKLGGRGAAIGPRLGRLHGGQVDLGALGVRNITPS YFHSFR >gi|316917549|gb|ADCU01000023.1| GENE 154 139838 - 141316 1500 492 aa, chain + ## HITS:1 COG:STM3592 KEGG:ns NR:ns ## COG: STM3592 COG3104 # Protein_GI_number: 16766878 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Salmonella typhimurium LT2 # 1 490 1 489 489 768 86.0 0 MNKPAPVGLLQQPKPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFA ALVYGLISIGGYVGDHLLGTKRTMVLGAIVLALGYFMTGLSLHKPDLIFIALGTIAVGNG LFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLLSLSLAPIIADKYGYAVTYNLCG IGLVVALLVYFCCRGMVRDIGSEPDSKPMNLKNLLLVLIGTVVMVYVCAWLMHNVKVANI VLIVLSIIVIFFFFREAFKQNKSDRNRMYVAFVLMIEAVLFYILYAQMPTSLNFFAINNV HHEILGFAINPVSFQALNPFWVVVASPILASLYTRFGAKGKDLTMPAKFTLGMFLCSLGF LTAAAAGLWFADAQGLTSPWFIVLVYLFQSLGELMISALGLAMVAALVPQYLMGFILGMW FLTQAAAFLLGGYVATFTAVPEGISDPLQTLPIYTGVFSKIGIATFIIAIIMAAMVPWLN RMMNTKPEAQNA >gi|316917549|gb|ADCU01000023.1| GENE 155 141500 - 142843 1364 447 aa, chain + ## HITS:1 COG:STM1299 KEGG:ns NR:ns ## COG: STM1299 COG0334 # Protein_GI_number: 16764650 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 447 1 447 447 811 87.0 0 MEQPRSLEHFLTTVQQRDPNQPEFLQAVREVMTTLWPFLEQNPHYRDAALLERLIEPERV IQFRVTWVDDRGQVQVNRAWRVQFSSAIGPFKGGMRFHPSVNLSILKFLGFEQTFKNALT TLPMGGGKGGSDFNPKGKSDGEIMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMA GMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTDAMLKRHGLGFEGMRVAVSGS GNVAQYAIEKAMALGARVITASDSNGTVVDEAGFTTEKLARLCQIKSQQDGRIADYAKEF GLTYLEGQQPWGVSVDIALPCATQNELDAPAARILIANGVKAVAEGANMPTTIEATDLFL EAGVLFAPGKAANAGGVATSGLEMAQNAARMGWKAEKVDLRLHHIMLDIHQACVEYGGED KQTHYVRGANIAGFVKVADAMLAQGVL >gi|316917549|gb|ADCU01000023.1| GENE 156 142909 - 144081 1053 390 aa, chain - ## HITS:1 COG:SMb21600 KEGG:ns NR:ns ## COG: SMb21600 COG1680 # Protein_GI_number: 16264788 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Sinorhizobium meliloti # 31 387 30 387 396 379 50.0 1e-105 MRKKMQNTLKLLSVITCLAATAQGALAANIDESKIKDTVDDLIQPLMQKNNIPGMSVAVT VNGKNYIYNYGLAAKQPQQSVTENTLFEVGSLSKTFAATLASYAQVSGKLSLDQSVSHYV PELRGSSFDHVSVLNVGTHTSGLQLFMPEDIKNTTQLMAYLKAWKPADAAGTHRVYSNIG TGLLGMIAAKSLGVSYEDAIEKTLLPQLGMHHSYLKVPADQMENYAWGYNKKDEPVHVNM EILGNEAYGIKTTSSDLLRYVQANMGQLKLDANAKMQQALTATHTGYFKSGEITQDLMWE QLPYPVSLPNLLTGNDMAMTKSVATPIVPPLPPQENVWINKTGSTNGFGAYIAFVPAKKM GIVMLANKNYSIDQRVTVAYKILSSLEGNK >gi|316917549|gb|ADCU01000023.1| GENE 157 144296 - 145162 431 288 aa, chain + ## HITS:1 COG:AGl3463 KEGG:ns NR:ns ## COG: AGl3463 COG0583 # Protein_GI_number: 15891848 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 283 2 286 292 320 57.0 2e-87 MRSHLPLNALRAFEASARHLSFTRAGLELSVTQAAVSQQVRMLEARLGTQLFKRLPRGLE LTDEAHVLLPVLSDAFSQIETVLKQFEGGHFHEVLTVAAVGTFAVGWLMPRLQSFYTEHP FVELRLLTNNNLVNLAGEGLDFAIRFGTGMWPTTHNAELFSAPLSVLCTPSVAQRLQHPE NLAKEILMRSYRAEEWNSWFLAAGIEPIRVNGPIFDSSRLMVEAAIQNAGVALAPARMFE HELQNGLLVSPFDIEVEVGSYWLTWLKSKPMTPAMQLFHQWLLIQAKD >gi|316917549|gb|ADCU01000023.1| GENE 158 145471 - 146823 515 450 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 5 444 4 442 458 202 32 6e-51 MIKHYDYLAIGGGSGGIASINRAAMYGQKCALVEAKYLGGTCVNVGCVPKKVMWHAAQIA EAIHLYGPDYGFDTTVNKFDWGKLIESRTAYIDRIHQSYERGLGNNKVDVIHGFAKFIDA HTIEVNGETITADHILIATGGRPSRPNIPGAEYGINSDGFFELDALPKRVAVVGAGYIAV EIAGVLNGLGAETHLFVRKHAPLRTFDPMIVETLVEVMNAEGPQLHTQSVPKSVTKNSDG SLTLALENGKEFEVDCLIWAIGREPANDNINLAAAGVKTNEKGYITVDKYQNTNVKGIYA VGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEEQAK EQHGEENVKVYKSAFTAMYTAVTQHRQPCRMKLVCVGKDEKIVGIHGIGYGMDEMLQGFA VALKMGATKKDFDNTVAIHPTGSEEFVTMR >gi|316917549|gb|ADCU01000023.1| GENE 159 146888 - 147538 480 216 aa, chain - ## HITS:1 COG:aq_540 KEGG:ns NR:ns ## COG: aq_540 COG2095 # Protein_GI_number: 15606002 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Aquifex aeolicus # 1 208 6 212 214 62 24.0 8e-10 MEAWLVQFLLLYVTFLAMFSPPATMTAAAILLGGIPNTALRRVAWRVAWEYVFVMMIVIW LGNYMLTALGLSTHALTATGGAALLFQGWPLMTRGTKAEQSNALLNSESPRNVNDLAVVP LLFPLSIGGGTIAVGISSAAHSNTLDGLLMLSAVILAMAPTIAVTFLASGPLHGRLSTGA MDTLARISGIILVTLSLQLLVSGITGLVITAIHMLS >gi|316917549|gb|ADCU01000023.1| GENE 160 147540 - 148847 831 435 aa, chain - ## HITS:1 COG:ybaT KEGG:ns NR:ns ## COG: ybaT COG0531 # Protein_GI_number: 16128470 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 12 430 10 428 430 385 57.0 1e-106 MMGEPPVSASKNKSLSIFNVAALGIGAMVGAGIFALLGQAALLVHSATWLSFAAGGVIAL FSGYAYSCLGAFYPSRGGIIDFFRHGLPSTTLANMLSLLYLVTLALTIAMVARAFGAYAL QLFHEHSTSNGLQEAYAGGIILVLALVNMASSNAVGRTELVLVAIKLGILLVLIAAGLMT IKPQLLQIHQAPSTNEFLSSVGMTFFAYAGFGMMANASDKVANPRRTMPRAFMIAICLTI VLYILLSLVLLGNVSAADLAKYADTAVAQAAYPILGRLGFTVVSIGALLATASAINATLF SAFNIMYSMGDNKTLPALFKQTLWHQATYGNVLAVLAVLILAIALNLNSLANVASATFLI CYLAVFVVAWRLRHKINASPVLVLLGMILMLLVFIGFMSSLLIQGAKEVAIVVGALLVCW LLALNAKRQQRLSGR >gi|316917549|gb|ADCU01000023.1| GENE 161 148847 - 149785 798 312 aa, chain - ## HITS:1 COG:ybaS KEGG:ns NR:ns ## COG: ybaS COG2066 # Protein_GI_number: 16128469 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Escherichia coli K12 # 3 311 2 310 310 486 77.0 1e-137 MTIDPSRLQQAVANAYSQYSTLAGGENASYIPYLASVPSQLSALAIVTVDGEAFSQGDAD FRFALESISKVCSLALALEDVGPSEVQDKIGADPTGLPFNSVIALELHNGKPLSPLVNAG AMSTVSLVNASDRENRWARILDIQQKLAGAPIALSDEVNHSEQTTNFHNRAIAWLLYSAG AMYCDPMEACDVYTRQCSTLFNTVELATMGATFAAGGINPRTKKQVLTASNTPFILAEMT MEGMYGSSGDWAYTVGLPGKSGVGGGILAVVPGVMGIAAFSPPLDPTGNSVRGQKMVASV AQELGYNLYRGC >gi|316917549|gb|ADCU01000023.1| GENE 162 149995 - 151584 1182 529 aa, chain - ## HITS:1 COG:BMEII0909 KEGG:ns NR:ns ## COG: BMEII0909 COG0531 # Protein_GI_number: 17989254 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Brucella melitensis # 14 502 19 509 510 595 63.0 1e-170 MSDNNISSTAKPSASAKKLGIATLAIMNIVAVVSLRGLPAEAEYGLSSIFYYLFAAVFFL IPVSLVAAELATGWPEKGGVFRWVGEAFGPRWAFLAMFMLWIEVTVWFPTALTFSAVSLA FIGPDQKWDEALSADKFFVLGIVLFVYWLATFIAFKGVGTFAKVSKWGGIIGTIIPAVIL IVLGFSYLIFGGAPQIKLSWDEVIPDFTNFDNIVLAASIFLFYAGMEMNAIHVKDVENPK RNYPIAIMLAALGTVLIFVLGTLAIAFVIPQSDISLTQSLLVAYDTMFKWAGIEWLGPVV AFALAIGVLAGVVTWVAGPSSGLLIVAKAGYLPRWWQHTNKNGMATHILLLQALLVSLLA ILFVVLPSVQAAYQIMSQLTVILYLIMYMLMFSSAIYLRYSQPNRPRPYRIPGGDIGMWI IGGAGLVGSILAFVFSFIPPSQISVGSPTEYVGILIALTIFFAVLPFLIYLIRKPHWRDE NSDFAPFTWQVESGHPGIQNVSSAHTGDVVTAPVKTTEPAILPAVTPKP >gi|316917549|gb|ADCU01000023.1| GENE 163 151698 - 153098 1353 466 aa, chain - ## HITS:1 COG:ECs4397 KEGG:ns NR:ns ## COG: ECs4397 COG0076 # Protein_GI_number: 15833651 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Escherichia coli O157:H7 # 1 466 1 466 466 905 89.0 0 MAKKEVADFRSELLDSRFGSEAIRNISEGKIFPKDEMREDVAFQIISDELFLDGNARQNL ATFCQTWDDDNVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMMADLWNAPVPANGQAVG TNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTNKPNLVCGPVQICWHKFARYWDVELREI PMQPGQLFMDPKRMVEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKLQADTGLDIDM HIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEAALPEELV FKVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQSASYQVAGYLADAIAKL GPYEFICSGGPEEGIPAVCFRVKEGANPGYTLLDLSERLRLRGWQVPAFTLSGEMSDVVV MRIMCRRGFEMDFAELLLEDFKASLKYLGEHPSLQGIATQNSFNHT >gi|316917549|gb|ADCU01000023.1| GENE 164 153411 - 153728 317 105 aa, chain + ## HITS:1 COG:no KEGG:ECS88_3922 NR:ns ## KEGG: ECS88_3922 # Name: hdeA # Def: acid-resistance protein # Organism: E.coli_S88 # Pathway: not_defined # 22 105 27 110 110 112 71.0 6e-24 MNKKTLLISMVCLMGFSAIGHAAENKKPVKSWTCEDFLALDESFKPTAIGFAEALNKKDK PEDAVLDVDGTEKVIPLVIEACKQNPKESFAQKVKSEWKKVKKDM >gi|316917549|gb|ADCU01000023.1| GENE 165 153953 - 155203 856 416 aa, chain + ## HITS:1 COG:MA3918 KEGG:ns NR:ns ## COG: MA3918 COG0004 # Protein_GI_number: 20092714 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Methanosarcina acetivorans str.C2A # 11 414 2 402 404 411 58.0 1e-114 MSHIAIAFHQIDVGNTAFMLLCTSLVMLMTPGLAFFYGGLVSRKDVLTIMFQSFVSMGWT AILWFVVGYSLCFGPTINGIIGDPSYYAFLNNVHPSTMYTGNSGGIPLIVHIGYQMMFAI ITPALITGAFANRVTFRAYLIFLTLWLLFVYCPFVHMVWSPNGLFARWGVLDFAGGIVVH ATAGFAALAAALYVGKRAISSGGSHSVPFIALGAGLLWFGWYGFNAGSELQVNTVTVSAF FATDIAAATAAVTWLIIEYCHTKKPNFVGFLTGSIAGLATITPAAGYVSLQAAALIGIIA SLVCYFMVGLMRKYLDDALDVFGVHGMGGVVGSILLGVFATQLWNPAGASGLLDGNVNFF FKQVVVVVFASVWSFIVTYGILWSIGRFTPVRVKREYQIAGIDEEQLGENAYPADK >gi|316917549|gb|ADCU01000023.1| GENE 166 155384 - 155707 396 107 aa, chain + ## HITS:1 COG:no KEGG:ETAE_2870 NR:ns ## KEGG: ETAE_2870 # Name: hdeB # Def: acid-resistance protein # Organism: E.tarda # Pathway: not_defined # 20 102 33 115 120 104 53.0 1e-21 MNKYSVPLLVGLISSGLLMANVAKAAQDVTPTNMTCQEFLNMNSKSYSPIVFWILNKDTD FSGGDYVDWHETETLATPKAVELCKKSPSTKVESLKETLENAVKKVE Prediction of potential genes in microbial genomes Time: Wed May 18 15:45:45 2011 Seq name: gi|316917391|gb|ADCU01000024.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.24, whole genome shotgun sequence Length of sequence - 196806 bp Number of predicted genes - 161, with homology - 152 Number of transcription units - 104, operones - 33 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 50 - 679 543 ## ETAE_3372 hypothetical protein - Prom 868 - 927 5.3 - Term 1282 - 1323 -0.9 2 2 Tu 1 . - CDS 1356 - 2267 525 ## COG0583 Transcriptional regulator - Prom 2335 - 2394 5.0 3 3 Tu 1 . + CDS 2736 - 3713 625 ## COG1295 Predicted membrane protein + Term 3727 - 3774 5.2 4 4 Tu 1 . - CDS 3768 - 4661 590 ## COG0583 Transcriptional regulator - Prom 4682 - 4741 4.9 + Prom 4677 - 4736 3.1 5 5 Tu 1 . + CDS 4816 - 5985 1197 ## COG2814 Arabinose efflux permease + Prom 6152 - 6211 2.1 6 6 Tu 1 . + CDS 6260 - 6793 167 ## COG2134 CDP-diacylglycerol pyrophosphatase + Prom 6829 - 6888 6.2 7 7 Tu 1 . + CDS 6911 - 7561 606 ## COG2323 Predicted membrane protein - Term 7561 - 7595 7.0 8 8 Op 1 . - CDS 7604 - 7852 387 ## COG2261 Predicted membrane protein 9 8 Op 2 . - CDS 7919 - 8413 579 ## Spro_3520 putative cell envelope integrity inner membrane protein TolA - Term 8468 - 8506 1.0 10 9 Tu 1 . - CDS 8527 - 10578 1513 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis - Term 10638 - 10664 -1.0 11 10 Tu 1 . - CDS 10681 - 11364 507 ## COG2200 FOG: EAL domain - Prom 11587 - 11646 3.9 + Prom 11702 - 11761 3.1 12 11 Tu 1 . + CDS 11831 - 12031 313 ## COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog + Term 12073 - 12110 -0.6 + Prom 12097 - 12156 4.9 13 12 Tu 1 . + CDS 12223 - 13167 848 ## COG0524 Sugar kinases, ribokinase family - Term 13175 - 13221 13.2 14 13 Tu 1 . - CDS 13230 - 14765 1314 ## COG0612 Predicted Zn-dependent peptidases - Term 15034 - 15077 7.1 15 14 Tu 1 . - CDS 15118 - 16401 1349 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 16554 - 16613 7.4 - Term 16442 - 16474 0.8 16 15 Tu 1 . - CDS 16693 - 18669 1601 ## COG2200 FOG: EAL domain - Term 18912 - 18963 15.3 17 16 Op 1 4/0.205 - CDS 19002 - 22508 3115 ## COG0457 FOG: TPR repeat 18 16 Op 2 . - CDS 22481 - 23686 740 ## COG3405 Endoglucanase Y 19 16 Op 3 . - CDS 23689 - 25983 1782 ## Spro_0149 cellulose synthase regulator protein 20 17 Op 1 1/0.436 - CDS 26096 - 28636 1486 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 21 17 Op 2 . - CDS 28660 - 29415 533 ## COG1192 ATPases involved in chromosome partitioning 22 17 Op 3 . - CDS 29415 - 29612 247 ## SARI_04013 hypothetical protein - Prom 29640 - 29699 6.4 23 18 Op 1 . + CDS 29901 - 31463 934 ## YE4077 hypothetical protein 24 18 Op 2 . + CDS 31460 - 31681 170 ## 25 18 Op 3 . + CDS 31668 - 33335 1258 ## Spro_0143 hypothetical protein + Term 33363 - 33393 2.6 - Term 33708 - 33741 3.1 26 19 Op 1 44/0.000 - CDS 33767 - 34774 787 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 27 19 Op 2 44/0.000 - CDS 34771 - 35751 584 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 28 19 Op 3 49/0.000 - CDS 35771 - 36676 949 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 29 19 Op 4 38/0.000 - CDS 36688 - 37707 380 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 - Prom 37825 - 37884 2.9 30 19 Op 5 . - CDS 37887 - 39515 1652 ## COG0747 ABC-type dipeptide transport system, periplasmic component 31 20 Tu 1 . + CDS 40091 - 40579 537 ## COG2606 Uncharacterized conserved protein - Term 40600 - 40632 4.1 32 21 Tu 1 . - CDS 40653 - 42215 1328 ## COG0840 Methyl-accepting chemotaxis protein - Prom 42369 - 42428 3.3 - Term 42405 - 42441 2.5 33 22 Tu 1 . - CDS 42480 - 44117 1312 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 44332 - 44391 2.4 - Term 44337 - 44377 4.2 34 23 Tu 1 . - CDS 44410 - 45264 759 ## COG0345 Pyrroline-5-carboxylate reductase - Prom 45286 - 45345 2.4 - Term 45344 - 45391 12.8 35 24 Tu 1 . - CDS 45428 - 45685 273 ## - Prom 45818 - 45877 2.7 - Term 45970 - 46013 7.0 36 25 Tu 1 . - CDS 46015 - 46524 465 ## COG1443 Isopentenyldiphosphate isomerase - Prom 46562 - 46621 3.6 + Prom 46577 - 46636 5.5 37 26 Tu 1 . + CDS 46658 - 47071 334 ## COG3602 Uncharacterized protein conserved in bacteria + Term 47082 - 47128 11.1 - Term 47076 - 47110 3.3 38 27 Tu 1 . - CDS 47140 - 48501 1217 ## COG0531 Amino acid transporters - Prom 48644 - 48703 7.7 - Term 48643 - 48677 0.1 39 28 Tu 1 . - CDS 48749 - 49036 99 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 49108 - 49167 3.0 - Term 49735 - 49765 3.3 40 29 Tu 1 . - CDS 49833 - 52109 2139 ## COG1982 Arginine/lysine/ornithine decarboxylases + Prom 52525 - 52584 8.4 41 30 Tu 1 . + CDS 52628 - 53173 364 ## COG1437 Adenylate cyclase, class 2 (thermophilic) 42 31 Tu 1 . + CDS 53516 - 54499 399 ## ECL_02376 lysine-N-methylase 43 32 Tu 1 . - CDS 54707 - 55135 585 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 55163 - 55222 4.2 - Term 55240 - 55274 5.2 44 33 Op 1 3/0.308 - CDS 55300 - 57594 2051 ## COG1882 Pyruvate-formate lyase 45 33 Op 2 3/0.308 - CDS 57678 - 58823 756 ## COG0282 Acetate kinase - Term 58882 - 58930 9.3 46 34 Op 1 4/0.205 - CDS 58946 - 60271 1249 ## COG0814 Amino acid permeases 47 34 Op 2 . - CDS 60344 - 61336 476 ## COG1171 Threonine dehydratase - Prom 61493 - 61552 13.5 48 35 Op 1 . - CDS 62183 - 62779 413 ## COG2094 3-methyladenine DNA glycosylase 49 35 Op 2 . - CDS 62819 - 63901 803 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 63666 - 63725 3.5 50 36 Tu 1 . + CDS 63809 - 64570 196 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 64586 - 64630 5.2 + Prom 64593 - 64652 3.4 51 37 Tu 1 . + CDS 64774 - 65742 823 ## COG0835 Chemotaxis signal transduction protein - Term 65759 - 65808 2.0 52 38 Tu 1 . - CDS 65848 - 66732 303 ## COG0657 Esterase/lipase - Prom 66885 - 66944 6.5 - Term 67398 - 67430 -0.9 53 39 Op 1 . - CDS 67521 - 67883 169 ## COG1445 Phosphotransferase system fructose-specific component IIB 54 39 Op 2 . - CDS 67899 - 68762 266 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 68800 - 68859 5.1 55 40 Tu 1 . - CDS 68893 - 69843 704 ## COG0176 Transaldolase - Prom 69875 - 69934 1.8 56 41 Op 1 . - CDS 69981 - 70298 285 ## COG1445 Phosphotransferase system fructose-specific component IIB 57 41 Op 2 . - CDS 70332 - 71582 1270 ## CD0209 putative sugar-phosphate kinase 58 41 Op 3 . - CDS 71601 - 72653 981 ## COG1299 Phosphotransferase system, fructose-specific IIC component 59 41 Op 4 . - CDS 72697 - 75213 1482 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 60 42 Tu 1 . + CDS 75202 - 75372 88 ## + Prom 75489 - 75548 6.5 61 43 Op 1 . + CDS 75572 - 76225 280 ## COG0637 Predicted phosphatase/phosphohexomutase 62 43 Op 2 . + CDS 76242 - 78233 1817 ## COG0021 Transketolase - Term 78382 - 78417 -0.6 63 44 Tu 1 . - CDS 78635 - 79627 828 ## COG3943 Virulence protein - Prom 79661 - 79720 1.6 64 45 Tu 1 . - CDS 79760 - 79930 139 ## plu0136 hypothetical protein - Prom 79950 - 80009 1.6 - TRNA 80165 - 80255 75.7 # SeC(p) TCA 0 0 + Prom 80293 - 80352 5.4 65 46 Tu 1 . + CDS 80428 - 81003 570 ## COG0693 Putative intracellular protease/amidase + Term 81010 - 81049 3.0 + Prom 81006 - 81065 3.8 66 47 Op 1 3/0.308 + CDS 81194 - 82651 518 ## PROTEIN SUPPORTED gi|90020673|ref|YP_526500.1| ribosomal protein L9 67 47 Op 2 . + CDS 82638 - 84962 1777 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases + Term 84984 - 85020 7.4 - Term 84971 - 85008 8.2 68 48 Op 1 1/0.436 - CDS 85013 - 86173 858 ## COG2807 Cyanate permease 69 48 Op 2 . - CDS 86197 - 86655 548 ## COG0590 Cytosine/adenosine deaminases - Prom 86683 - 86742 3.0 - Term 87516 - 87549 3.7 70 49 Tu 1 . - CDS 87665 - 89323 1541 ## COG2985 Predicted permease + Prom 89631 - 89690 3.2 71 50 Tu 1 . + CDS 89767 - 90417 563 ## EFER_0928 hypothetical protein + Term 90442 - 90483 8.4 - Term 90430 - 90469 7.1 72 51 Tu 1 . - CDS 90476 - 91456 808 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 91582 - 91641 4.6 - Term 91599 - 91640 9.7 73 52 Tu 1 . - CDS 91667 - 91789 69 ## - Prom 91810 - 91869 4.9 74 53 Op 1 14/0.000 - CDS 91935 - 93356 1330 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 75 53 Op 2 5/0.154 - CDS 93403 - 94479 940 ## COG3852 Signal transduction histidine kinase, nitrogen specific - Prom 94505 - 94564 4.2 - Term 94655 - 94711 -0.9 76 54 Tu 1 . - CDS 94739 - 96148 1368 ## COG0174 Glutamine synthetase + Prom 96220 - 96279 5.9 77 55 Tu 1 . + CDS 96515 - 98338 1872 ## COG1217 Predicted membrane GTPase involved in stress response + Term 98371 - 98401 3.0 78 56 Tu 1 . - CDS 98436 - 100067 1084 ## COG0840 Methyl-accepting chemotaxis protein - Prom 100205 - 100264 3.4 + Prom 100283 - 100342 4.5 79 57 Op 1 2/0.359 + CDS 100366 - 100953 612 ## COG1011 Predicted hydrolase (HAD superfamily) 80 57 Op 2 7/0.077 + CDS 101029 - 101982 524 ## COG1295 Predicted membrane protein 81 57 Op 3 5/0.154 + CDS 101992 - 102429 424 ## COG1490 D-Tyr-tRNAtyr deacylase 82 57 Op 4 . + CDS 102511 - 103440 757 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 83 58 Tu 1 . - CDS 103492 - 104724 1227 ## COG0477 Permeases of the major facilitator superfamily - Prom 104746 - 104805 4.7 + Prom 104883 - 104942 5.5 84 59 Tu 1 . + CDS 104998 - 105993 469 ## COG3274 Uncharacterized protein conserved in bacteria 85 60 Tu 1 . - CDS 106105 - 107286 928 ## COG1609 Transcriptional regulators - Prom 107323 - 107382 3.0 - Term 107352 - 107388 7.2 86 61 Tu 1 . - CDS 107400 - 108875 1319 ## COG0477 Permeases of the major facilitator superfamily - Prom 108913 - 108972 7.8 87 62 Op 1 11/0.000 + CDS 109210 - 110571 1342 ## COG2115 Xylose isomerase + Term 110590 - 110624 6.0 88 62 Op 2 . + CDS 110648 - 112117 1006 ## COG1070 Sugar (pentulose and hexulose) kinases + Term 112139 - 112187 3.4 + Prom 112265 - 112324 2.5 89 63 Tu 1 . + CDS 112411 - 113319 809 ## COG0685 5,10-methylenetetrahydrofolate reductase + Term 113389 - 113418 2.1 - Term 113377 - 113406 2.1 90 64 Tu 1 . - CDS 113431 - 113751 433 ## COG3060 Transcriptional regulator of met regulon - Prom 113882 - 113941 6.5 + Prom 113928 - 113987 4.0 91 65 Op 1 5/0.154 + CDS 114027 - 115190 909 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 92 65 Op 2 . + CDS 115247 - 117682 2452 ## COG0527 Aspartokinases + Term 117815 - 117866 6.3 93 66 Tu 1 . - CDS 118307 - 121021 2006 ## COG2909 ATP-dependent transcriptional regulator - Prom 121067 - 121126 3.6 - Term 121216 - 121251 -0.5 94 67 Tu 1 . - CDS 121257 - 121478 79 ## + Prom 121302 - 121361 8.2 95 68 Op 1 7/0.077 + CDS 121561 - 123969 2261 ## COG0058 Glucan phosphorylase 96 68 Op 2 5/0.154 + CDS 123981 - 126140 1556 ## COG1640 4-alpha-glucanotransferase + Term 126304 - 126345 -0.9 + Prom 126224 - 126283 3.4 97 69 Op 1 9/0.000 + CDS 126472 - 128691 1506 ## COG0296 1,4-alpha-glucan branching enzyme 98 69 Op 2 7/0.077 + CDS 128675 - 130654 1217 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 99 69 Op 3 17/0.000 + CDS 130720 - 132003 897 ## COG0448 ADP-glucose pyrophosphorylase 100 69 Op 4 10/0.000 + CDS 132050 - 133480 1073 ## COG0297 Glycogen synthase 101 69 Op 5 . + CDS 133575 - 136022 1685 ## COG0058 Glucan phosphorylase + Prom 136155 - 136214 3.1 102 70 Tu 1 . + CDS 136266 - 137108 248 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 137255 - 137314 7.8 103 71 Tu 1 . + CDS 137425 - 137712 214 ## 104 72 Tu 1 . - CDS 137794 - 139281 1382 ## COG0578 Glycerol-3-phosphate dehydrogenase - Prom 139355 - 139414 4.9 - Term 139331 - 139389 15.1 105 73 Op 1 . - CDS 139524 - 139922 363 ## COG1396 Predicted transcriptional regulators 106 73 Op 2 . - CDS 139909 - 140097 122 ## PputGB1_3777 hypothetical protein - Prom 140228 - 140287 3.3 - Term 140396 - 140445 5.1 107 74 Op 1 6/0.103 - CDS 140470 - 141228 663 ## COG1349 Transcriptional regulators of sugar metabolism 108 74 Op 2 4/0.205 - CDS 141262 - 142098 669 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) - Prom 142131 - 142190 4.1 109 75 Tu 1 . - CDS 142251 - 142580 374 ## COG0607 Rhodanese-related sulfurtransferase - Prom 142608 - 142667 4.4 + Prom 142584 - 142643 5.0 110 76 Tu 1 . + CDS 142854 - 143288 297 ## + Term 143491 - 143547 4.1 111 77 Op 1 4/0.205 - CDS 144122 - 144865 597 ## COG0584 Glycerophosphoryl diester phosphodiesterase 112 77 Op 2 21/0.000 - CDS 144900 - 145976 1007 ## COG3839 ABC-type sugar transport systems, ATPase components 113 77 Op 3 38/0.000 - CDS 145981 - 146826 705 ## COG0395 ABC-type sugar transport system, permease component 114 77 Op 4 35/0.000 - CDS 146823 - 147710 559 ## COG1175 ABC-type sugar transport systems, permease components - Term 147728 - 147781 9.7 115 78 Op 1 . - CDS 147791 - 149113 1292 ## COG1653 ABC-type sugar transport system, periplasmic component 116 78 Op 2 . - CDS 149031 - 149195 56 ## - Prom 149277 - 149336 5.1 117 79 Op 1 18/0.000 - CDS 149389 - 150090 261 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 118 79 Op 2 19/0.000 - CDS 150142 - 150912 290 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 119 79 Op 3 24/0.000 - CDS 150909 - 152180 1230 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 120 79 Op 4 . - CDS 152177 - 153103 1006 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components - Prom 153132 - 153191 2.8 121 80 Tu 1 . + CDS 153136 - 153408 69 ## - Term 153231 - 153272 2.7 122 81 Tu 1 . - CDS 153401 - 154513 1286 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 154609 - 154668 4.4 + Prom 154635 - 154694 7.0 123 82 Tu 1 . + CDS 154931 - 155344 354 ## NT01EI_3698 hypothetical protein + Term 155383 - 155412 -0.3 - Term 155184 - 155237 1.5 124 83 Op 1 6/0.103 - CDS 155348 - 156484 1228 ## COG1929 Glycerate kinase 125 83 Op 2 4/0.205 - CDS 156495 - 157763 1256 ## COG2610 H+/gluconate symporter and related permeases - Prom 157842 - 157901 2.4 126 84 Tu 1 . - CDS 157918 - 159045 714 ## COG3835 Sugar diacid utilization regulator - Prom 159109 - 159168 3.2 - Term 159119 - 159149 4.3 127 85 Tu 1 . - CDS 159180 - 160031 1074 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Prom 160170 - 160229 7.7 - Term 160246 - 160293 10.1 128 86 Op 1 28/0.000 - CDS 160309 - 161286 1087 ## COG2177 Cell division protein 129 86 Op 2 9/0.000 - CDS 161279 - 161947 338 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 130 86 Op 3 . - CDS 161953 - 163764 750 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 - Prom 163816 - 163875 4.9 + Prom 163738 - 163797 3.7 131 87 Op 1 6/0.103 + CDS 163975 - 164556 386 ## COG0742 N6-adenine-specific methylase 132 87 Op 2 . + CDS 164572 - 164844 335 ## COG3776 Predicted membrane protein + Term 164856 - 164895 7.4 - Term 164719 - 164749 1.1 133 88 Op 1 . - CDS 164884 - 165243 356 ## PANA_3728 YhhM 134 88 Op 2 . - CDS 165240 - 165560 319 ## COG4517 Uncharacterized protein conserved in bacteria - Prom 165805 - 165864 5.4 + Prom 165762 - 165821 7.8 135 89 Tu 1 . + CDS 165843 - 166469 649 ## COG3714 Predicted membrane protein + Term 166718 - 166762 -0.9 136 90 Op 1 4/0.205 - CDS 166667 - 167998 1085 ## COG3048 D-serine dehydratase 137 90 Op 2 . - CDS 168011 - 169348 1208 ## COG2610 H+/gluconate symporter and related permeases - Prom 169416 - 169475 2.3 138 91 Tu 1 . + CDS 169572 - 170519 713 ## COG0583 Transcriptional regulator - Term 170398 - 170432 -0.3 139 92 Tu 1 . - CDS 170516 - 171187 478 ## COG2258 Uncharacterized protein conserved in bacteria - Prom 171227 - 171286 5.0 - Term 171255 - 171288 4.5 140 93 Tu 1 . - CDS 171315 - 171941 593 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent - Prom 171994 - 172053 5.8 + Prom 172399 - 172458 5.2 141 94 Tu 1 . + CDS 172511 - 173404 341 ## COG4714 Uncharacterized membrane-anchored protein conserved in bacteria - Term 173398 - 173440 3.1 142 95 Tu 1 . - CDS 173580 - 174386 545 ## COG1526 Uncharacterized protein required for formate dehydrogenase activity - Prom 174485 - 174544 2.1 143 96 Op 1 5/0.154 + CDS 174680 - 175267 372 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 144 96 Op 2 16/0.000 + CDS 175316 - 177730 2063 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 145 96 Op 3 12/0.000 + CDS 177743 - 178681 663 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 146 96 Op 4 9/0.000 + CDS 178678 - 179310 621 ## COG2864 Cytochrome b subunit of formate dehydrogenase + Term 179394 - 179425 2.4 + Prom 179463 - 179522 1.7 147 96 Op 5 . + CDS 179545 - 180474 881 ## COG3058 Uncharacterized protein involved in formate dehydrogenase formation + Term 180493 - 180526 1.0 + Prom 180558 - 180617 4.4 148 97 Op 1 . + CDS 180763 - 181515 605 ## Spro_0060 xylose isomerase domain-containing protein 149 97 Op 2 4/0.205 + CDS 181517 - 182458 844 ## COG0524 Sugar kinases, ribokinase family 150 97 Op 3 3/0.308 + CDS 182529 - 183824 1072 ## COG0477 Permeases of the major facilitator superfamily 151 97 Op 4 . + CDS 183828 - 184802 730 ## COG1052 Lactate dehydrogenase and related dehydrogenases 152 98 Tu 1 . - CDS 184935 - 186308 1092 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 186413 - 186472 2.6 - Term 186353 - 186392 -0.3 153 99 Tu 1 . - CDS 186491 - 187030 536 ## COG3078 Uncharacterized protein conserved in bacteria - Prom 187203 - 187262 3.5 + Prom 187560 - 187619 5.6 154 100 Tu 1 . + CDS 187781 - 188431 663 ## COG0218 Predicted GTPase + Term 188453 - 188483 2.1 - Term 188479 - 188518 8.1 155 101 Tu 1 . - CDS 188738 - 191539 2832 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains - Prom 191725 - 191784 5.8 + Prom 191906 - 191965 5.2 156 102 Tu 1 . + CDS 192065 - 192919 351 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 192924 - 192951 1.5 - Term 192905 - 192946 10.6 157 103 Op 1 5/0.154 - CDS 192962 - 193585 625 ## COG0526 Thiol-disulfide isomerase and thioredoxins 158 103 Op 2 5/0.154 - CDS 193617 - 194603 406 ## COG2334 Putative homoserine kinase type II (protein kinase fold) - Term 194605 - 194667 7.5 159 103 Op 3 . - CDS 194691 - 194960 259 ## COG3084 Uncharacterized protein conserved in bacteria - Prom 195091 - 195150 6.0 + Prom 195042 - 195101 5.6 160 104 Op 1 11/0.000 + CDS 195126 - 195710 232 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 161 104 Op 2 . + CDS 195707 - 196225 332 ## COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein + Term 196237 - 196267 3.0 - 5S_RRNA 196329 - 196456 100.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. Predicted protein(s) >gi|316917391|gb|ADCU01000024.1| GENE 1 50 - 679 543 209 aa, chain - ## HITS:1 COG:no KEGG:ETAE_3372 NR:ns ## KEGG: ETAE_3372 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 13 209 1 197 197 266 65.0 4e-70 MNSLSTSSSELEVINLDNAVIGILSDDPMFATGLKSILKKIAPLGQGAVVDSDRTKFIMV DLDSLNQSIFHLVRSLSGLRAYDLYRIVFWTSNQAEHTLNFVRLIDNASFINKKAPLESV EQAVKQVLSGGRFVTQEVQHTFQTSNGPGRVTEETFTILDDMMSGMRVKCIAAKLNTADK SIYSKLRQFRERLSLLRKSDFLSFIHDIS >gi|316917391|gb|ADCU01000024.1| GENE 2 1356 - 2267 525 303 aa, chain - ## HITS:1 COG:VC2485 KEGG:ns NR:ns ## COG: VC2485 COG0583 # Protein_GI_number: 15642481 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Vibrio cholerae # 4 293 25 312 321 90 25.0 4e-18 MLDIDVSVIRIFLTVMDTRSVTLAAELLNSSTASVSRALKKMRDSFNDPLFIRTKKGLEP TALAYNITPNLAQALNSIQSAVSVSTSLHHGDNRQTRLKLSLSPMLEYYLTSILQQQGYP FDSVALTNETHDGDLTKDITRLRTRKIDISFTPQKYADWMITNVPLFDVFPVVMCRKGHP RIKAGFNLKQLENEEYLSPTMWPSLFEDNIVLNPHNKAPIYSSTSVLNLMMMAATTDYIL VCGRIFAHQFEKLVDVQILDFPHAKPMGTIYAHYHKSRAADANIIELIQQIRVGEQAQLE NEN >gi|316917391|gb|ADCU01000024.1| GENE 3 2736 - 3713 625 325 aa, chain + ## HITS:1 COG:YPO3985 KEGG:ns NR:ns ## COG: YPO3985 COG1295 # Protein_GI_number: 16124112 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 20 321 30 331 360 474 82.0 1e-134 MPNDIDAKSSTASVTKQVTKTIHKANCFVTWFKAIPSVAHIIRAVDRFNDRLGSQFGAAI TYFSFLSLIPILMVSFAAVGFVLASNPDLLTELINKIVSSISDPNLANTLKNTVNTAIQQ RTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNPQDQEKFYFRYLRDFISLTGLV IALIVSLSFTSIAGAAQASIVKALGLDGIEWLRPVMTAIALSISIMANYLLFLWIFLVLP RHKPKKKALLRGTLIAAIGFEVIKFVMTWTLPSLARSPSGAAFGSVIGLMAFFYFFARLT LFCAAWIATADYAGDKTVERKAPQD >gi|316917391|gb|ADCU01000024.1| GENE 4 3768 - 4661 590 297 aa, chain - ## HITS:1 COG:PA1859 KEGG:ns NR:ns ## COG: PA1859 COG0583 # Protein_GI_number: 15597056 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 292 1 292 295 358 64.0 5e-99 MKTTTEELVAFVAVVDAGSLTGAAEQLGQTPSGISRALGRLEQKLETTLLNRTTRRIDLT EEGRIFLDRARAILEAIEEAEEQLALQRHRPAGRLRINAASPFMLHVVVPLIDEFTARFP EIVLELNTSDQIIDLLEQRTDVAIRIGTLQDSSLHARPIGRSRLKVLASPSYLQKHGTPQ QVTDLSGHRLLGFTQPQSLNQWPLKQSQCASFAVTPDIAASSGETLRHLAISGRGIVCLS DFMTHQDIAEGRLVPILTEHTLETYQSIHAVYYRNSQLSARIRCFLDFLAERYPLHR >gi|316917391|gb|ADCU01000024.1| GENE 5 4816 - 5985 1197 389 aa, chain + ## HITS:1 COG:RSc1153 KEGG:ns NR:ns ## COG: RSc1153 COG2814 # Protein_GI_number: 17545872 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Ralstonia solanacearum # 1 386 1 386 400 479 79.0 1e-135 MPLALFALTISAFAIGTTEFVIVGLIPTIATDLQVSLPSAGLLVSLYALGVAIGAPVLTA LTGRMPRKTLLIGLMVLFTLGNLLAWKAPGYTSLMTARVLTGLAHGVFFSIGSTLATSLV PKEKAASAIAIMFTGLTVALVTGVPLGTFIGQHFGWHETFLAVSLLGIVALIGSLIFVPN GLKHTPPASIARQLTILKQPRLLMVYAKTALGYGGNFVAFTFLAPILQQVSGFSAGAVTW VMLIYGVSVAAGNLWGGRLADRMGPIKALQIIFLLLAAVLAVFSFTAHSPILALITVLFW GAVAFGNVPGLQVYVVQQAERYAPHAVDVASGLNIAAFNLGIAGGAWVGGMVVENYGLMV TPWIGAIVVLLAFGMTRWSGALDKRACAQ >gi|316917391|gb|ADCU01000024.1| GENE 6 6260 - 6793 167 177 aa, chain + ## HITS:1 COG:ECs4843 KEGG:ns NR:ns ## COG: ECs4843 COG2134 # Protein_GI_number: 15834097 # Func_class: I Lipid transport and metabolism # Function: CDP-diacylglycerol pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 169 79 247 251 191 52.0 6e-49 MPTAKITGIESPLLLKPQQPNYFAAAWQQRPWLSKRYGSPVPDNVLSLTVNSEYGRSQNQ LHIHMSCTKPQVRQQINRLIPSLSNQWQPIKNGINSHRYWARKLEKSELSHSSPFILLAN GLPAAREDMGAFGLALLPVDDGSFVLLATQREWWKMNLASIEEIQDHRCISLYTSRR >gi|316917391|gb|ADCU01000024.1| GENE 7 6911 - 7561 606 216 aa, chain + ## HITS:1 COG:FN0036 KEGG:ns NR:ns ## COG: FN0036 COG2323 # Protein_GI_number: 19703388 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 7 208 8 208 210 112 31.0 4e-25 MEYYGYVLVKFILGFAIVITHLNFSGKTQLSQMTPVDFIGNFVLGGIIGGVIYSDAIPLY QYIIVLLIGVCLISLLNAISKHVYFFRSVTIGDPIPIIKKGRFLMENILAKKNKIDILNV SSQLHAQGIHSFQEINYAQIEPSGQLTVVCEGAQMPSIILMKDGRLRSYELNQIEKDEAW MQQELERCGIKAEDVFIAEFWDGKLMFILRNGEIVR >gi|316917391|gb|ADCU01000024.1| GENE 8 7604 - 7852 387 82 aa, chain - ## HITS:1 COG:YPO1181 KEGG:ns NR:ns ## COG: YPO1181 COG2261 # Protein_GI_number: 16121476 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 82 26 107 107 103 85.0 8e-23 MGILSWIIFGLIAGILAKWIMPGKDGGGFIVTVILGVVGAVVGGYISTFFGYGKVDGFNF GSFMVAVIGALVVLFIYRKIRS >gi|316917391|gb|ADCU01000024.1| GENE 9 7919 - 8413 579 164 aa, chain - ## HITS:1 COG:no KEGG:Spro_3520 NR:ns ## KEGG: Spro_3520 # Name: not_defined # Def: putative cell envelope integrity inner membrane protein TolA # Organism: S.proteamaculans # Pathway: not_defined # 1 163 1 163 171 102 60.0 5e-21 MNVWNKVLLASLFGLVVAGCDDSTKVDANLDKAKDNAEQIKDAADNKADQITDAAKQQAD KLKKEADAQAEQLKDKAKAIKSEAEKRADAITDDAKAKANSLEKQAKQQSDQIVEQAKNI KDSAISGANDLSADAQTKTQAIKDSMKQNPPAQSGSAPATNGNQ >gi|316917391|gb|ADCU01000024.1| GENE 10 8527 - 10578 1513 683 aa, chain - ## HITS:1 COG:ZyhjG KEGG:ns NR:ns ## COG: ZyhjG COG2982 # Protein_GI_number: 15804068 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Escherichia coli O157:H7 EDL933 # 1 683 6 691 691 822 59.0 0 MTRTKKTLSWLAGIVALVIVGIVIFVITFDWNRLKPTINQKVSTELNRPFAIRGNLGVDW SRPADETGWRSWVPWPHVHAEDIVLGNPADIPAVSMVSLERVDASLSPLALLGKQIYIPR IKLKQPDASLRRLANGKNNWTFELANASNEGQPKDQKSAWSFKIDDIVFDQGKIAYDDAM IGAKFKATIDPLGKPLPFSEVVGDSSSAKKVASKKAPDYVFGWKVDGTYNDESLSGSGKI GGMLALRDPDGLFPLQADVRSGKTRVAVAGTLSDPLNLGALDLRLQFSGQSLSQLHKLTG IVLPDTPPYSTDGHLSAELKRAKGAIYRYQNFNGKIGDSDIHGSLTYQMSKPRPSLSGEL VSNQLRFADLAPLIGADSNQEKASRGEKATQPSDKVLPRDKFDTKQWSTMDANVKFTAKR IEHGESLPLSDLYTHLSLNNGTLLMDPLRFGVAGGNLNSTIRLEGKRTPMRGTADLHARG FQLQKLLPNVESMRRSLGQLNGDAKISGTGNSVADLLGTSNGDVRLLVNDGVISRNLMEI AGLNVGNYLVGKLFGDDEVKINCAAADIGIKNGLAATRLFVFDTENAVINISGNVNLATE RMDLSIDPESKGMRVLTLRSPLYVKGTFKHPDVGVKAGPLIARGVAAVALGAVVAPAAAL LALISPSEVDSNQCGGMLKGMKK >gi|316917391|gb|ADCU01000024.1| GENE 11 10681 - 11364 507 227 aa, chain - ## HITS:1 COG:YPO3988 KEGG:ns NR:ns ## COG: YPO3988 COG2200 # Protein_GI_number: 16124115 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Yersinia pestis # 2 225 51 274 276 278 60.0 8e-75 MYTFQPIYCTSGVLLAIELLTAVHHPENPDCRLSPEDYFEHISESLRQDVVLEQLRLIYQ WHGFIQQCDLLVSVNVDGQTLQSLQLQPEARELLDHMPYLRFEMVEHAYAALTMPIQSLE DVHRLWLDDFGSGLANFSSLMECRYEFVKLDRALFSFLRESHEGIRLFYALVALMSRYAK GVIVEGVETSQEWTLVKRSEACAAQGYYLSRPNPFDFLHQLPMRFSE >gi|316917391|gb|ADCU01000024.1| GENE 12 11831 - 12031 313 66 aa, chain + ## HITS:1 COG:YPO3989 KEGG:ns NR:ns ## COG: YPO3989 COG1942 # Protein_GI_number: 16124116 # Func_class: R General function prediction only # Function: Uncharacterized protein, 4-oxalocrotonate tautomerase homolog # Organism: Yersinia pestis # 1 64 1 64 66 100 85.0 6e-22 MPFVNIKITREGATAEQKEALIAGVTQLLVDTMGKNPATTVVIIEEVETDNWGIGGKSVT ELRKKK >gi|316917391|gb|ADCU01000024.1| GENE 13 12223 - 13167 848 314 aa, chain + ## HITS:1 COG:STM3612 KEGG:ns NR:ns ## COG: STM3612 COG0524 # Protein_GI_number: 16766898 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 8 314 2 309 309 483 76.0 1e-136 MTTASHSSAKIAVIGECMIELSQKGADLSRGFGGDTLNTSVYLSRQVPESKLAVHYVTAL GTDTFSDEMLNAWQHEGVKTELTQRLENKLPGLYFIETDASGERTFYYWRNDAAARYWLD SDSAEAICDQLAQFDYLYLSGISLAILNDNSRERLLTLLKRCRANGGKVIFDNNYRPRLW QSVEQTQSTYTAMLSCTDIAFLTLDDEDLLWGAKPVDEVIARTHALGVSEVVIKRGADSC IVSAAGQTVDVPAVKLPKDKVIDTTAAGDSFSAGYLSVRLLGGEPAAAAQRGHQTASTVI QYRGAIIPQDAMPR >gi|316917391|gb|ADCU01000024.1| GENE 14 13230 - 14765 1314 511 aa, chain - ## HITS:1 COG:YPO3991 KEGG:ns NR:ns ## COG: YPO3991 COG0612 # Protein_GI_number: 16124118 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Yersinia pestis # 1 474 1 473 499 613 67.0 1e-175 MQGTKIRLMVGGLLLAAASSTVHSEALQPDPAWQEGKLDNGFSWQLLATPQRPSDRIELR MIVSTGSLVESSQQVGFAHLLPRLALTHSDNFTASQLQSFWQQSIDPQRPLPPAVSSYDY TAYNLSLPNNRPELLKDALQWLANTAGKLQIDNNTVISALQSPENLVATLPSDVNDPWWR LRLKGSTLLGHEPGQGPNRPVDTQLLKSFYQQWYTPDAMTLYVVGNVDSRSLSEQINKAF AELKGKRETPATLPTLAPLPNTPINLIADNAQQDTLSITWDVPWQPIRDSQVLQRYWKSD FAREALFSHLQQVLANSDLKGSVNLMFDCQVQYQRSQCAIHLATTQANLNKALSFIATEM SAVHDDGITQQEFDTIVAQKKDQLTKLFATYARTDTDILMSQRLRSQQSGVVDISPETYQ KLRQDFLATLTLDDLNQELHNQLSREPTLILRQPRGEPEENVKALRDVYSSIMGLNMEDA AAAADAIPEDTSSAPASQTDPAAKEEPTSAQ >gi|316917391|gb|ADCU01000024.1| GENE 15 15118 - 16401 1349 427 aa, chain - ## HITS:1 COG:dctA KEGG:ns NR:ns ## COG: dctA COG1301 # Protein_GI_number: 16131400 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Escherichia coli K12 # 1 417 1 417 428 637 87.0 0 MKKNIFKSLYFQVLLAISLGILLGHFYPDLGAQMKPLGDGFVKLIKMIIAPVIFCTVVTG IAGMESMKAVGRTGAIALLYFEVVSTIALIIGLVIVNIVQPGAGMNVDPAALDAKAVAVY ADQAAQQGLVAFIMDIIPGSVIGAFASGNILQVLLFAVMFGFALHHLGEKGQMMFNFIDS FSKVIFGIINMIMKLAPIGAFGAMAFTIGKYGVGTLVQLGQLIVCFYITCVLFVVFVLGS IAKATGFSIFRFIAYIKEELLIVLGTSSSESALPRMLDKMEKVGCKKSVVGLVIPTGYSF NLDGTSIYLTMAAVFIAQATNSHMDIWHQITLLVVLLLSSKGAAGVTGSGFIVLAATISA VGHLPVAGLALILGIDRFMSEARALTNLIGNGVATIVVAKRVRQLDENQMRAVLGKKDRS ATQTQTL >gi|316917391|gb|ADCU01000024.1| GENE 16 16693 - 18669 1601 658 aa, chain - ## HITS:1 COG:YPO3996_3 KEGG:ns NR:ns ## COG: YPO3996_3 COG2200 # Protein_GI_number: 16124123 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Yersinia pestis # 398 656 2 263 270 256 45.0 1e-67 MAMVSIVALITICIFVVIQLFHFVDQRKEDYVQQLENLAHSVREPLSEAMLNMDAVRAQK ILDSLVPIGILSRADVMLPNELQALKGRFPQARAVPEAVMQIFDLPVQVSMPLYGTERNI AARQPSSYLVLQADSFRIYQFILSTLSTMVSTYLLLALILTVAISWCMNRLLVYPLRALA QELRSMPLDAPNFHQLTPPPLHGDDELGLLVRNYNRNQQALEKAHQAMSRMSTRNPVTNL PNMTLFVPLLEQHLLVCRKENSGIVVINICTLQEAMGVLDAAQRDMLLNSLICRLKACVS DSDMLAQINQDRFVVLVRNVEMPHSLTLFAKNVMDIITQPLDLGAIAIRPTACIGISLYQ PDPKQPIDAKRDAEQLLSQASSAMNVAAREGKNQILFFEPTLAQKAKDRLTKETEIMSAL TQGDFSLYLQPQIDLRTGRLAGAEALIRWNRQDGELMLPSEFIPLAEEVGGIEALGEWVI TESMEILSTWQKQNIGVPISLNVSGVQIANLGYVELLERMLLEYQLDPHMLHLEVTETAY ISNITQAAEMLARLRKIGIKIALDDFGMGYAGLNYLQHLPVDIIKIDKNFVDQIPHDDAL VRIVASIAEVLALDVVAEGVESHTQCEWLLKHGIYYAQGYWFSPALPQDEFERKYFLI >gi|316917391|gb|ADCU01000024.1| GENE 17 19002 - 22508 3115 1168 aa, chain - ## HITS:1 COG:ZyhjLm KEGG:ns NR:ns ## COG: ZyhjLm COG0457 # Protein_GI_number: 15804991 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Escherichia coli O157:H7 EDL933 # 5 1167 2 1154 1154 1242 57.0 0 MRKYRNFSLSGLSLSIGLSLASMTGVSVAADTVVSPQQWLLEQIRVGEASHRDDLVKQSL YRLELIDPNNPDVIAARMRLALRQGDQQLAQQQLDKLKTLAPNSEAYKQAKMNMALTTPE GRQQLQQARLLATAGHVPEAIEAYQKLFDGTPPSVDLAVEYLRVVARQPGQEANVINQLE TLRKSNPGNGELQRTLASMLLGTNQTQKAYAVLEKMAANDSTRGDAADLWMGSINQQPVS AQSVAALQRYLTVFGQDPSAADARKKLADQQKLLTDPAYVARTRGLAMVDSGKGGVAIPD LQKALVAKPNDADVLGALGQAYARQDNRPKALEYFQRALKADSTGYDRDKWLSLIKSNQY WLAIQSGDKALKANQLDSAQQKYQQARGIDNTDSYAPLGLGDVAVARKDDASAERYYQQA LRLDSTNSSAVRGLVGIYQRQSPAKALAYLDSLSRGQRNAMQGAINSIQSDVLQQQAQAL EQQQQWAGAASKLQQALKLSPNDVWLTYRLAKDLHAAGRTDDADRAFSTLAQQLPGDPQQ VYAHALYLSSTDRDRAALALVDSLPKSKWDTDIHELSDRLHFGETLQKAQDLRDAGHEDE AITYLRQQPANTQVDLTLADWAMEREDYTVALAGYRDVLLREPNNASAHLGEIEAFIAQG ELEQARSQLQALQQEKPADAPSMNTERRVADAWASVGDMSKAQEIFDRITPQAAKSSGQA GALVMRDAARFEQKQGHPDKALDYYRDAMVTSGIAPSKSQDNDTFTRLTRNDEKDDWLKR GVRSDAADLYRQQDVNVTLDHDYARSSGTGGYSDLTANTTMLQMDAPLYDGRMFLRTDIV DMQAGSFKGGTYKEKFGTCYVNGCKPGNSQNSTGASLAAGWKNANWEGDFGTTPMGFDVV DWAGGLSYSSDWNHIGWTVNAHRRPISSSLLAFGGQKDDQTGTTWGGVRRTGVGISGSYD RGEANGVWADLSADQLTGKNVEDNSSIRWMAGYYYKLINENNRRFTVGLSNMIWHYDKDL SGYTLGQGGYYSPQQYVSFGVPVNYRQRTENWSWELGGSVSWSHSKTSTTDRYPIKNLLP EPDKKNNKYTDKYDTDSGSSSSGVGYTLRAIIERRVTSNWFIGAGVDIQQAKDYTPSHGL IYIRYSAAGWQGDMDLPPTPLTPYADFK >gi|316917391|gb|ADCU01000024.1| GENE 18 22481 - 23686 740 401 aa, chain - ## HITS:1 COG:ECs4411 KEGG:ns NR:ns ## COG: ECs4411 COG3405 # Protein_GI_number: 15833665 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase Y # Organism: Escherichia coli O157:H7 # 32 389 7 360 368 452 63.0 1e-127 MFGWIKARILSASPLAGRGAESGGWQIGAIGGLLLLSSLATHAVAACDWPEWQQFKQNYI SEQGRVIDPSSPKKITTSEGQSYGLFFALVANDRAAFDNILQWTQNNLAQGDLSARLPAW LWGRKDKNQEGKEEWGVLDTNSASDSDLWIAYSLMEAGRLWKVRSYQSLGVLLLQRIARE EVVHLPGFGVMLLPGRVGFAHPPVWTINPSYLPPQLMARMAHFHGPWAALHKNNQRLLLA SSPKGFVPDWIDWRKGKGWEATPDKPNVSGYDAIRVYLWAGMMADEDPNKAVLIKQWQPM ATITADLGYPPERVNVATGKATGYGNSGFSAALLPFLAGSQAQAVQRQRVKDNPLSDDAY YSYVLTLFGQGWDQQRYRFNLKGELLPHWDSSTCVSIATSH >gi|316917391|gb|ADCU01000024.1| GENE 19 23689 - 25983 1782 764 aa, chain - ## HITS:1 COG:no KEGG:Spro_0149 NR:ns ## KEGG: Spro_0149 # Name: not_defined # Def: cellulose synthase regulator protein # Organism: S.proteamaculans # Pathway: not_defined # 1 764 1 769 769 1031 67.0 0 MNKKIFWLTAVALGISTLVHAEPVSPVIGTENTDANVATSETVAAQPQVVAVPTRDVNLT FAKIAPAPGSMHLRGVDPTGQFEFGVRSDEVVSNAMLNLEFTPSPALLPVESQVKVFLND QLMGVLPISKEQLGKKNSAQVPIDPRYITDFNRVRLEFVGNHREICGNPASNAVWLDVSN ASSVDLTYQGLPLKNDLSYFPEPFFDARDYSALTLPIVFAGQPDLAEQRAAGVLASWFGS KAQWRGQNFPVLFNQLPEKHAVVFATNDKRPDFLRDYPAVDGPVVEMISHPDNPYVKLLL VLGRDDKDLMTAVRGIAQGNILFRGASVEVEGVKTLAPRIPYDAPNWVRTDRPMTFSELQ TYAEQLQSSGLEPSPISVTLNLPPDLFLIRSTGIDMRMKYRYTSPLTADGSRMGIYLNNQ FIEAYNLVPEKEKGALLMRLPLFQGLIDKNTDVSIPALKLGASNQLRFDFDYANPISGGS LNNCVTSQPIPNTVAIDGNSTIDFSGYRHFMAMPDLRSFVNAGFPFSRLADLSETEVVVG KQPTPSQVTAMLNALGSIGAQTGFPALNVSLTDDWAQVKDKDSDVLLIGTIPEALKNDDK IDLLVDATQSWIKMPMRKPNLDTIMPEASSMKPDSRTTIRSDGAMAAVIGFQSPYHDQRS VVALLADSPRGYGLLNEAMIDSGKKAAMSGSVVVIRESGVNSMRVGDIYYVGHLPWWERL WHMFATHPILVAVMSAVSVVLIAIVLWRLLRILRRRRLSPDERD >gi|316917391|gb|ADCU01000024.1| GENE 20 26096 - 28636 1486 846 aa, chain - ## HITS:1 COG:yhjO KEGG:ns NR:ns ## COG: yhjO COG1215 # Protein_GI_number: 16131405 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 3 841 28 870 888 1297 70.0 0 MRPARQALVDRYYQYRQSASALGSVLGCFWLTVAWFFLKLESPRWQQIRAQQTTLFPHID TQRPRPLDIVRYAIQSLWLIVFFSGRNTKEWGIRALIKKWHNGYHDWLKSLPEKMQEHGA DESEQAFNRLGQGIRRLVLGVMCVVSALLALLCISQPFDLSSQFVFVVLLWGIAMIVRRI PGRFSSLMMIVLSLTVSCRYIWWRYTSTLNWDDPVSLICGLLLLAAETYAWVVLVLGYFQ TIWPLNRQPAPMPEDIKSWPTIDIMVPTYNEDMSVVKPTIYAALGIDWPKEKLNIWLLDD GGREEFREFAEQVGVKYVARTTHEHAKAGNINNALKQATGEFVAIFDCDHVPTRSFLQLT LGWFFKDKKLGMMQTPHHFFSPDPFERNLGRFRRTPNEGTLFYGLLQDGNDMWDATFFCG SCAVLRRSALDEVGGIAVETVTEDAHTSLRLHRRGWTSAYIRIPQAAGLATESLSAHIGQ RIRWARGMVQIFRLDNPLLGKGLKLAQRICYANAMLHFLSGIPRLIFLTAPLAFLLMHAY IIFAPALAIALYVIPHIVHSSLTNSKIQGKYRHSFWSEIYETVLAWYIARPTTVALLNPH KGKFNVTAKGGLVEHQHVDWVITRPYLILVLLNFAGLILGIWRMSFGPQDEIWTVAMSMA WVFYNMIILGGAVAVSVETKQVRQSHRVEIAMPAAIARKDGHIFPCTLRDYSDGGVGVEL REGSVLNDGENITLMLKRGQQEYSFPAKVTRVFGQKAGLRMDNMSVAQHIEFIQCTFARA DTWALWQDSFAQDKPVESLLDILKLGFRGYQSLADYAPPILRSVFIGFTTLVTWTVSFIP RGVSKA >gi|316917391|gb|ADCU01000024.1| GENE 21 28660 - 29415 533 251 aa, chain - ## HITS:1 COG:STM3620 KEGG:ns NR:ns ## COG: STM3620 COG1192 # Protein_GI_number: 16766906 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Salmonella typhimurium LT2 # 1 249 1 249 250 281 58.0 7e-76 MAVIALQGLRGGVGTTSITAALAWGLQQLGESVLVIDMTPANLLRMHFNTDFAHSQGWAR AEFDGIAWQDAALRYTELLDFLPFGQINGDEHAQFFTDVTRWIDWSRNINALRASGRYNW ILLDVPSGMHPLAQHFTSLADSVINVIVPDTNCHIRLHQQPLPQGVFLLANQLVATSQLQ EDIYQLWLQSLPSLLPMVIHRDEAMAEASAVKQPLGEYYPHSLAAEEIMTLANWCLLHFD AEGNAADGMIP >gi|316917391|gb|ADCU01000024.1| GENE 22 29415 - 29612 247 65 aa, chain - ## HITS:1 COG:no KEGG:SARI_04013 NR:ns ## KEGG: SARI_04013 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_arizonae # Pathway: not_defined # 12 59 11 60 62 63 58.0 2e-09 MNDKRINLIAKDPTFTFQNDIAALSNAFAIPKINYVDISRQEHMNEVIRRWPLLAELTQL TGRVR >gi|316917391|gb|ADCU01000024.1| GENE 23 29901 - 31463 934 520 aa, chain + ## HITS:1 COG:no KEGG:YE4077 NR:ns ## KEGG: YE4077 # Name: bcsE # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 517 1 516 519 533 51.0 1e-150 MALSFSLGVHQLWDELLIMQAPGLYWISADREVDAKSFCQQVISSQPAETRAALISVKCP PQDIIGANYTLGPNKLPIYSLPEKRKALFQFTEDLMRGLHPKNRLLVLFTPSGIWEQLQP YELTEWMRDTTRWLRQQNCTLLIIDYGKSANSQRTMLQSQHRTLCGLASLRWLQDLHRYD VAYWCNQNGVTAQQDVSVYFDERGWHAHEDTPQAPQPRNDEQIYMAHKAVLEGAPPLSEN WHLFESNLALFNAAYAAQACTLVFQLSNSDQIDTLAREIHSLRRQRGKAIKLVVRESTTC LRFSDERLLLACGANLIIPHNAPLSRCLTMLESVQGHTYPRHVPSDIDLLIEAMRPLNLK GYIPYNTFCETLMSLMNNTLLPEDSKGILIALRPVPGLRTEQVLTICRTRRFGDLVTIDE NRLTLFLSSCRINDLDIALSHIFPLPVDEVFTNRMVWYQDKLIIAELQQMQSNKPSNWHL SDRITPLVNRKNSESAAEHPLRHSPQPIRLLLTPSQERVE >gi|316917391|gb|ADCU01000024.1| GENE 24 31460 - 31681 170 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMNSMDILQIIIVCAVILLPLGYYLRKKLPHILQSIRQVLFTPRYLKSEGILRRNTRLQR NTSVTVDRKNDQK >gi|316917391|gb|ADCU01000024.1| GENE 25 31668 - 33335 1258 555 aa, chain + ## HITS:1 COG:no KEGG:Spro_0143 NR:ns ## KEGG: Spro_0143 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 3 555 2 550 550 807 70.0 0 MTKNSNSTNTLTDLWHYWRGLGGWNFYFLLKFALLWFGYLNFDALSNLIFLAFLLFPLPN VRLHRWRNWIAIPIGIGLFYHDTWLPGINSIMSQGSQLAGFSASYLLDLVNRFINWKMIG AGFVMLVGYLFISQWIRVTVFVVGALVWLNVLQIAGPAFSLTPDTTSANATTAAAESSDA STNSAGVNSDLPAQTAPPDNKNLSAYLDAFYASEQQRQTQFPTALPADAQPFDLLIINIC SLAWSDVDSVGLQDHPLWKHFDILFKNFNSATAYSGPASIRLLRASCGQPSHKELYSAAG QQCYLMDNLAKLGFGQRLIMDHSGKFGNYLEDLRKDAGLQTPLESQAGISHELTSFDGEP IFNDLEVLQRWQQTVEKSGDARTATFFNLIPLHDGNRMVGSSKSADYKPRAQKLFDQLDA FLTQLEKSNRKVMVVVVPEHGAALVGDKMQMSGLRDIPSPSITHVPVGIKFIGMKAPQPT EIIVDQPSSYLALSELVARSVDGKIFTESSVNWQALLKGLPQTAPVSENDNAIVIQYQGK PYIRLNGGDWVPYPQ >gi|316917391|gb|ADCU01000024.1| GENE 26 33767 - 34774 787 335 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 12 328 11 329 329 307 48 2e-82 MSHATLNKQAPLLQAIDLKKHYPVKKGLFGAERLVKALDGVSFTLERGKTLAVVGESGCG KSTLGRLLTMIEIPTGGELYYQGQDLLKPDATAEKLRRQKIQIVFQNPYASLNPRKKVGA ILEEPLTINTSLSAVERREKALAMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLNP DVVIADEPVSALDVSVRAQVLNLMMDLQQEMGLSYVFISHDLSVVEHIADEVMVMYLGRC VEKGPKDAVFNNPRHPYTQALLSATPRLNPDMRRERIKLTGELPSPLNPPPGCAFNARCR RAFGTCKQLQPQLKQYGEQLIACFAVDQDEAAESA >gi|316917391|gb|ADCU01000024.1| GENE 27 34771 - 35751 584 326 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 13 314 28 324 329 229 41 7e-59 MALLDVNELSVHFGEKEAPFRAVDRISYSVNQGEVVGIVGESGSGKSVSSLAIMGLIDFP GRVTASSLSFNNIDLQKISEKERRQIVGAEVAMIFQDPMTSLNPCYTVGFQIMEALKVHQ GGNRSTRRQRAIDLLTLVGIPDPGSRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEP TTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVEAGTAQE IFRTPRHPYTQALLRALPEFAADKARLASLPGVVPGKYDRPNGCLLNPRCPYANDLCRQV EPELKDINGRRAKCHTPLDDAGRPTL >gi|316917391|gb|ADCU01000024.1| GENE 28 35771 - 36676 949 301 aa, chain - ## HITS:1 COG:YPO4001 KEGG:ns NR:ns ## COG: YPO4001 COG1173 # Protein_GI_number: 16124126 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Yersinia pestis # 12 301 11 300 300 452 92.0 1e-127 MSNVTTTSSGISAPKPMTPFQEFWHYFKRNKGAVVGLVYIVIVLILAIGANVLAPHLPAE QFRDALLKPPVWQDGGSWKFILGTDDVGRDVLSRLIYGARLSLLVGCLVVVLSLILGVIF GLLAGYFGGVVDAVIMRIVDIMLALPSLLLALVLVAIFGPSIVNASLALTFVALPHYVRL TRAAVLVEVNRDYVTASRVAGAGAMRQMFINILPNCLAPLIVQASLGFSNAILDMAALGF LGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPRLK Q >gi|316917391|gb|ADCU01000024.1| GENE 29 36688 - 37707 380 339 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 63 333 40 310 320 150 30 3e-35 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVTIMAGERGISAERHAQMMTEMGLDK PLYQQYFIYVKDVLHGDLGTSLKSRTPVWVEFVPRFKATLELGICAMLFAIAVGIPVGVL AAVKRGSIFDHTAVGISLTGYSMPIFWWGIMLIMLVSVQFNLTPVSGRIDDSVFLDDSYP LTGFMLIDTLLWGEPGDFKDAVMHMILPAIVLGTIPLAVIVRMTRSSMLEVLSEDYIRTA RAKGLGRMRVIIVHALRNALLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR RDYPVVQGGVLLVAIMIILVNLLVDVLYGVVNPRIRHKK >gi|316917391|gb|ADCU01000024.1| GENE 30 37887 - 39515 1652 542 aa, chain - ## HITS:1 COG:YPO4003 KEGG:ns NR:ns ## COG: YPO4003 COG0747 # Protein_GI_number: 16124128 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Yersinia pestis # 13 542 6 535 535 952 85.0 0 MSSYKNTSTHRGKKIGALKLGIGLVALALAAGAQAKTLVYCSEGSPEGFNPQLFTSGTTY DASSVPLYNRLVEFKTGTTEIQPGLAEKWEISPDGKTYTFHLRKGVKWQGSKLFTPTRDL NADDIVFSFMRQKDEKNPYYKVSGGTYEYFQGMGLGELISKVEKVDDNTVRFELTRPESP FLADLAMDFASILSAEYADAMMKAGTPEKIDLEPLGTGPFQLVQYQKDSKILYKPFKDYW GPKPKIDRLVFSITPDASVRYAKLQKNECQVMPYPNPADIDRMKQDKSITLMEQPGLNVG YLSYNVEKKPLDNVKVRQALTMAVNKEAIIEAVYQKAGQPAKNLIPPTMWSYNDKITDYA YDPAKAKELLKEAGLADGFAIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVKAKIVTYE WGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATLFSCQSAKDGSNYSRWCYKPFEDLIQP ARAESDHEKRTELYKQAQVVMHDQAPALIIAHSTVYEPVRKEVKGYVVDPLGKHHFDQVS LD >gi|316917391|gb|ADCU01000024.1| GENE 31 40091 - 40579 537 162 aa, chain + ## HITS:1 COG:STM1282 KEGG:ns NR:ns ## COG: STM1282 COG2606 # Protein_GI_number: 16764633 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 3 158 8 163 172 224 71.0 7e-59 MSIATFDRLSALLNEQQARYRVVEHPTAGKSEEVAKIRGTQLGQGAKALLCHVKGNGIKQ HVLAILPADKQADLSAVAHGIGGTRASLASPVEVDTLTDCVFGAIPPFSFHPDLLLVADP LLFERFDELAFNAGTLERSMILNTQDYQRIAQPKLVSFVKQE >gi|316917391|gb|ADCU01000024.1| GENE 32 40653 - 42215 1328 520 aa, chain - ## HITS:1 COG:YPO1675 KEGG:ns NR:ns ## COG: YPO1675 COG0840 # Protein_GI_number: 16121939 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Yersinia pestis # 78 518 96 518 557 318 48.0 1e-86 MSKHLTVRGGLAIIMLVYTLLLLMISIIGIQSVRQINQKLAVVNQVQAEELSPLAASFNA TLRARTAGALSMRQMEMGKLAAADDSRQRAEKLISESDAAMQKFTDLKKLTPRGAQLSAE LENSYQIYVSQALRPMLQALKANDSAKYYALLEDQLRNLSANFDRDLRDFRAFADEVGQK ALQDAQNDYQRDLIIISCAFAFSLLIGALCWVALRKIILHPLDRLDAHVSLIADGDLSQD LESEGKSEIAKLGRRLRSMQTSLADTVSQVRDASVQVEVGARELTAGNRNLSQHTEELAA SLEETAASMEQLTATVKQNADNAEQANHLAGNVSHTADKGAEIVSEAITRMQGISTSSQK IADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQSAKEIKTL IEDSARRVKEGSSMVTSAGETMAEIATEIRQVTTLMGEISEASHEQSRGIEQVNQAISQM DQVAQQNAALVEESAAATGSLEEQSGHLMQSMSVFKLAQN >gi|316917391|gb|ADCU01000024.1| GENE 33 42480 - 44117 1312 545 aa, chain - ## HITS:1 COG:YPO4013 KEGG:ns NR:ns ## COG: YPO4013 COG2194 # Protein_GI_number: 16124136 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Yersinia pestis # 7 544 17 553 563 805 68.0 0 MQALLLAIYVGIFLNIPVFLRRFDEVKEGLHFSKWMTGSLEVLVVLLFTFFVLRVCSLGG RRFFQIAATLITLISVAASYYMTAFNVVIGYGIIISVFSPGDLGLFSEVVGWKFLLWFIA ASIIPLAVIWLGSGRNTLLEQLKTPGKRISSLAVMAAIVAVVWVPLNMMGTAQKKIDQKN NVDMPSYGGVVAHSYLPSNWLAAFGLYAYTALDERQDEADLLDPAAKFTYVAPEGIDDTY IVFIIGETARWDHMGVLGYERDTTPQLAKEPNLAAFRGESCDTSTKLSLRCMFVREGGTE NNAQRTLKEQNIFSVLHHIGFSSELFAMQSEIWFYNNTDADNFSFRELIAAEHRNDGKPV DDMLLVEELKNSLQKHPNGKHLVVLHTSGSHYLYTQRYPRSYAKFQPECMGVDDSCTKEQ LMNSYDNSILYTDNMIKSVIDQVRDKKALVFYASDHGESISDNEHFHGTPREMAPPEQFR VPLMVWASDKFLASGDNAKMFAQVQKQAKQGQTHRHVELYDSILGCLGYTSPDGGINENN NWCRF >gi|316917391|gb|ADCU01000024.1| GENE 34 44410 - 45264 759 284 aa, chain - ## HITS:1 COG:proC KEGG:ns NR:ns ## COG: proC COG0345 # Protein_GI_number: 16128371 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Escherichia coli K12 # 16 283 1 268 269 317 64.0 2e-86 MSNGIVEESIVGINIVDKKIGFIGCGNMGKAILGGLVASKLVPAENITVYNRSAKSVEAI SQEFGSRGANSADEVAKEADVLIVGVKPNMMANILGEIRDALKPNAIIVSIAAGVTLETL EFALKDGQKVVRVMPNTPALVNAGMSSITPNKQVSEDESALIVEIFSSFGRAEIVPEYLI HSVVGVSGSAPAYVFMFIEAMADAAVLGGMPRAQAYQFAAQAVMGSAKMVLETGKHPGEL KDMVCSPGGTTIEAVKVLEQKGLRAAVMDAMQSCMAKSEEMSRR >gi|316917391|gb|ADCU01000024.1| GENE 35 45428 - 45685 273 85 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSIKNLAVVLALSVTAFAASAADLSSAPTSDMQKMGVVSVSGATTLDGLEARVAAKAEQ AGASSYRIISTTGNNRMHATAELYK >gi|316917391|gb|ADCU01000024.1| GENE 36 46015 - 46524 465 169 aa, chain - ## HITS:1 COG:STM3039 KEGG:ns NR:ns ## COG: STM3039 COG1443 # Protein_GI_number: 16766340 # Func_class: I Lipid transport and metabolism # Function: Isopentenyldiphosphate isomerase # Organism: Salmonella typhimurium LT2 # 4 156 6 161 181 103 36.0 2e-22 MIEVILVDESDMPVGRMEKLAVHQQGLLHRAISVYVFNDHQELLLQRRAVGKYHAGGQWS NTCCGHPFPGEDTQEAAMRRLYQEMGMACALHESFELSYRLDVGGGLIEHELAHVFIGHS NVVPQLNSEEADAFAYHPLEEIIEQMALEPERFTPWFRLCLPKVIERLG >gi|316917391|gb|ADCU01000024.1| GENE 37 46658 - 47071 334 137 aa, chain + ## HITS:1 COG:SMc01649 KEGG:ns NR:ns ## COG: SMc01649 COG3602 # Protein_GI_number: 15966014 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 1 133 1 132 134 125 52.0 3e-29 MSGIKEITQLLASMEPALNPNTFVFCTSQNLTLEQASKLNPLGLFFEAEGLTLILPRENA QAVGLNISSNFRQITLTVHSSLDAVGLTAAIATELAENGISANVVAAYYHDHIFVPEGDA QRALAALVALQQRCALA >gi|316917391|gb|ADCU01000024.1| GENE 38 47140 - 48501 1217 453 aa, chain - ## HITS:1 COG:ECs5097 KEGG:ns NR:ns ## COG: ECs5097 COG0531 # Protein_GI_number: 15834351 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 440 1 440 445 725 92.0 0 MSTDSESHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALALSMVY AKMSSLDPSPGGSYAYARRAFGPFLGYQTNVLYWLACWVGNIAMVVIGVGYLSYFFPALK DPMVLTVTCVAVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA AWNVSGQGTFGAIQSTLSVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYV LSTTAIMGMIPNAALRVSASPFGDAARLALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQT AKAAADDGLFPPIFAKVNKAGTPVAGLLIVGVLMTICQFGSISPNAAKEFGLVSSVTVIF TLVPYLYTCAALLLLGHGHFGKYRAVYIAVVTVAFIYCIWAVVGSGAQEVMWSFVVLMVI TAMYALNYNRLHKNPYPLDGTNPDGSLKATSNN >gi|316917391|gb|ADCU01000024.1| GENE 39 48749 - 49036 99 95 aa, chain - ## HITS:1 COG:STM4295 KEGG:ns NR:ns ## COG: STM4295 COG2207 # Protein_GI_number: 16767545 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 95 159 253 253 141 72.0 4e-34 MHKEWSLTSVASCLCLSPSSLKKKLKNEDTTYSKIITDCRMRYAAEQLLVFNKNISQVSS LCGYSSTSYFISVFKEYYGVTPLNYVHRSRDRMTA >gi|316917391|gb|ADCU01000024.1| GENE 40 49833 - 52109 2139 758 aa, chain - ## HITS:1 COG:STM4296 KEGG:ns NR:ns ## COG: STM4296 COG1982 # Protein_GI_number: 16767546 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Salmonella typhimurium LT2 # 1 756 2 755 756 1346 82.0 0 MKVLIVESEFLHQDTYVGAAVERLADELVRQDVEVLKATSFDDGYAILSANEAIDCLMFS RSMDDSAEQVLAQQLLNKLHERQENVPVFLLSDREKATQELSREMMEQIDEFAWILEDTA DFIAGRAVAAMKRYHQQLLPPLMSALMKYSDVHEYSWAAPGHQGGVGFTKTPAGRFYHDY YGENLFRTDMGIERTSLGSLLDHTGAFGESEKNAARVFGADHSYSVVVGTSGSNRTIMQA CMTEDDVVVIDRNCHKSIEQGLILTGAKPVYMLPSRNRYGIIGPIYPQQMQPEVIKEKIA NSPLTKDKIGQQPSYSVVTNCTYDGVCYNAKDAQGLLEKTTDRIHFDEAWYGYARFNPMY HNHYAMRGEPTENDRNGPTLFATHSTHKLLNALSQASYIHVRDGRGSVDFSRFNQAYMMH ATTSPLYAICASNDVAVSMMDGNSGLSLTQEVINEAVDFRQAMARLYKEFTQDGDWFFKP WNQEIVTDPATGKQMAFEDAPAELLASEQSCWVMNPGDNWHGFKDLPENWSMLDPIKVSI LAPGMGDDGELQEKGVPAALVTAWLSRHGIVPTRTTDFQVMFLFSMGVTKGKWGTLVNTL LSFKRHYDANTPLSQVLPELVDDYPEVYGKLGLRDLGDKMFAYLRKNNPGAKLNAAYSGL PEAVMTPRQAYQSIVANKVEMVAIDGLVNRIAANSIIPYPPGIPMLLSGENFGGEDSPQI GYLRALQAWDHEFPGFEHETEGTEIINGVYHVMCVRTE >gi|316917391|gb|ADCU01000024.1| GENE 41 52628 - 53173 364 181 aa, chain + ## HITS:1 COG:YPO1178 KEGG:ns NR:ns ## COG: YPO1178 COG1437 # Protein_GI_number: 16121473 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate cyclase, class 2 (thermophilic) # Organism: Yersinia pestis # 4 178 3 177 179 183 51.0 2e-46 MRHDHFIGKYEAELKFHLSEPDAFLQRITAAGAQPFHLDNREIDCYYELPGFPLINHGVS MCIREMQPSGIKLWIVKGPDASECEAINIEDCEKVASMVKKLGFVPSLRMEKNRSIYFLG RYHITIDHLPTLGHFAEIAIMTDDESALPSLLQELQQKAQALGLNESMREKRSYRQMLSQ T >gi|316917391|gb|ADCU01000024.1| GENE 42 53516 - 54499 399 327 aa, chain + ## HITS:1 COG:no KEGG:ECL_02376 NR:ns ## KEGG: ECL_02376 # Name: not_defined # Def: lysine-N-methylase # Organism: E.cloacae # Pathway: not_defined # 2 326 82 404 405 241 36.0 4e-62 MLNADKLCTIHAEMGPNALSMTCNTFPRLKRQYANETLLSLTMACPEVVNQVLFQPDSML VNEHEKLIVETAIRIKQKGVNADRSQTSQLINLFCSHLIMADSPTIEDNLLAIVHLILYL QQIKYEVETNVENLDSLFLSLQNQLASGEITKQRKQISSSASMKLMLLSVFGTAIQQLRR GRNFMVQNHLNLAAYLELDKEPNEAKVQEKFTVLNMQWEKVLANSCLSEEHVVKNYILYH MYNNAFPGDEMGDILRKYYLMIADYFYLKTQISMISMTRDVTQEEIMQLFGSFHMVYNHN HNLAKELNAYVDQINANDDLSCLLLLN >gi|316917391|gb|ADCU01000024.1| GENE 43 54707 - 55135 585 142 aa, chain - ## HITS:1 COG:ECs1997 KEGG:ns NR:ns ## COG: ECs1997 COG0589 # Protein_GI_number: 15831251 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 142 25 168 168 113 42.0 9e-26 MYKSILVPVDIEEDILTQNALRHVEYLAKMADADVHFLYVLPDAQAFVTAYSFGIKEFEN KAVTYAEEKIRELIQGVDLPKDRMSYTIRFGTPRDEALQQADEMGADLIIVGSHRPSVKT YLLGSNAAGIVRHAKVNVMVIR >gi|316917391|gb|ADCU01000024.1| GENE 44 55300 - 57594 2051 764 aa, chain - ## HITS:1 COG:ECs3994 KEGG:ns NR:ns ## COG: ECs3994 COG1882 # Protein_GI_number: 15833248 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli O157:H7 # 1 764 1 764 764 1365 83.0 0 MNIDLDVCENIFTDAWSGFSGSQWKEEINVRDFIQNNYTPYEGDESFLSTATEATTKLWE KVMEGVRLENATHAPVDFDDNIATTITAHAPGYIHQDLEKIVGLQTEKPLKRALFPFGGI NMIESSFEAYNRKLDPNFKYLFTDIRKTHNQGVFDVYSPEMLRCRKSGVLTGLPDGYGRG RIIGDYRRVALYGIRYLIRERELQFADLQGKLEKGIQLEQVIRQREELAEQKRALQQIQE MAAKYGFDISRPAQNAQEAIQWLYFGYLAAVKSQNGGAMSLGRTSTFLDIYLERDLKNGV INEQEAQQLIDHFIMKIRMVRFLRTPEFDTLFSGDPIWATEVIGGMGLDGRTLVTKNSYR YLNTLETMGPSPEPNLTILWSERLPKAFKAYAANLSIATSSLQYENDDLMRPDFDSDDYA IACCVSPMVVGKQMQFFGARANLAKTLLYCINGGVDEKLKIQVGPKVPAMTDEILDYDKV MASLDSFMDWLAVQYITALNVIHYMHDKYSYEAALMALHDRDVVRTMACGIAGLSVAADS LAAIKYAKVRPIRDESGLAIDFAIEGEYPQFGNNDQRVDDIACDLVERFMKKIQKLPTYR DAEPTQSILTITSNVVYGQKTGNTPDGRRAGTPFGPGANPMHGRDRKGAVASLTSVAKLP FKYAKDGISYTFSIVPGALGKDEFIRKNNLVGLIDGYFHHEEHVEGGQHLNVNVMNREML LDAIENPDKYPSLTIRVSGYAVRFNALTREQQQDVISRTFTSSL >gi|316917391|gb|ADCU01000024.1| GENE 45 57678 - 58823 756 381 aa, chain - ## HITS:1 COG:STM3242 KEGG:ns NR:ns ## COG: STM3242 COG0282 # Protein_GI_number: 16766541 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Salmonella typhimurium LT2 # 6 381 27 402 402 482 63.0 1e-136 MQGNNCDVMMSGIVDNVGIENTSMTIDKTISINLKTGSYEDALNSIVRELEKRKLSEAIS CVGHRIAHGGEAFSDATLINDEVLEEITNVSSLAPLHNYANLEGIMAARHIFPDLPHVAV FDTAFHQSLKPEAYTYALPQQYFKKYGVRRYGFHGTSHRYVAQQAIEQLGLDENNSGIIV AHLGNGASICAVQNGKSVDTSMGMTPLEGLVMGTRSGDVDFGALAYLADKTGKTLDDLMF MVNKESGLLGISGLSSDLRVLQKAYEEGHEGAQLAINVFVHRLARHIGGHAASLTKLDAL IFTGGIGENSELIRKLTLDHLAVFGLKIDDVKNHIRRTGDAEIVTSSSSKVIAAVIPTNE EKMIALDAMRVSSTAENIAFA >gi|316917391|gb|ADCU01000024.1| GENE 46 58946 - 60271 1249 441 aa, chain - ## HITS:1 COG:STM3243 KEGG:ns NR:ns ## COG: STM3243 COG0814 # Protein_GI_number: 16766542 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Salmonella typhimurium LT2 # 2 440 3 442 443 675 83.0 0 MTTDSVTYAKQGSTWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILIMLVLAYPI AFLCHRALARLCLSGSNISGNITDTVEEHFGKTGGVIITFLYFFAICPLLWIYGVTITNT FMTFWENQLQLMPLNRGLVALVLLMAMAFIIFFGKNLMVKVMSFLVFPFIASLVLISLSL IPYWNASVFEQVNASSISLLGHDGILVNVWLGIAIMVFSFNFSPIVSSFVESKREEYEPE FGAQFTEDRCSKIISRASMLMVAVVMFFAFSCLFTLSPAMMADAKAQNIPVLSYLANHFS SMSGGKSTFSTVLEYGASLIALVAIFKSFFGHYLGTLEGMNGLIVKFACKGDKKKYSAGK LNMISMFFIMGSTWVVAYVNPNILDLIEAMGAPIIASLLCLLPMYAVRKVPALAKYKGKP ENYFVTIVGLLTILNIFYKLV >gi|316917391|gb|ADCU01000024.1| GENE 47 60344 - 61336 476 330 aa, chain - ## HITS:1 COG:ECs3997 KEGG:ns NR:ns ## COG: ECs3997 COG1171 # Protein_GI_number: 15833251 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 326 1 326 329 456 76.0 1e-128 MKIYNNLPVTLNDIIEAQQRIKGHVYKTGMPKSNYLSERCNGTIHLKFENMQRTGSFKIR GAFNKLSSLSREEREQGVIACSAGNHAQGVSLSCAMLGIDSKVVMPCCAPSSKVAATADY SAEVILHGNSFNDTISKAQELIEAENRIFIPPYDDVKVIAGQGTIGLEILEDLYDVDNVI VPIGGGGLISGIAIALKSINPTINIIGVQAVNVHGMAKSFHEGQFLSHRTTGTIADGCDV ATPGKLTYEIVKELVTDIVVVTEEEIKRGMIDLIQRNKIVTEGAGALASAAILSGKLKGY IENKKTVSLISGGNIDLSRISEITGLNHVH >gi|316917391|gb|ADCU01000024.1| GENE 48 62183 - 62779 413 198 aa, chain - ## HITS:1 COG:CAC2969 KEGG:ns NR:ns ## COG: CAC2969 COG2094 # Protein_GI_number: 15896222 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase # Organism: Clostridium acetobutylicum # 3 196 2 191 205 172 47.0 5e-43 MKKLALDFYSADVITVAKRLIGCYLVRELEEGTIIGRINEVEAYDGAIDKACHAYGGKRT VRNEPLFRAGGIAHVYFVYGMHNCLNVVSGVMDEPAAVLLRGIDIVQGADLAAFNRYGKR MEELTKAQIKNLSNGPGKLCSALSVDRTFDYEPLSGSRLYICGQIRDFQKLPVTVTASKR IGIDYAEEAVDFLWRFTG >gi|316917391|gb|ADCU01000024.1| GENE 49 62819 - 63901 803 360 aa, chain - ## HITS:1 COG:SMb21385 KEGG:ns NR:ns ## COG: SMb21385 COG2207 # Protein_GI_number: 16264711 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Sinorhizobium meliloti # 112 360 44 292 311 203 41.0 4e-52 MNSALGEINDGAATQTTTATGNNSDFNILFHDKISSINDEFMIGEERDSGVPVIGVLLPN RILLRAMSMTEELLALLAKHTFSSHEQTPFHTALPSVTLVRASNGRYPRYILHRPALCMV LQGTKRTVFGDTPFDYSAGQALVVTTTMPGVSRIIEADALHPYLGIIVEFDMVILRDVFI QLSQRPIQKNEASHAAFVVDTNESLYRCVLRGLRLLDTPDAIPVLHTGFMQELCYWLLTG PNGVDIARVIMGDGHSAGVLSALALLRDKYTESLSLDALAKAANLSRSAFHRKFKDLTGM SPLDYQKQLRLLEARQLLLAHNNTAEAIAFQVGYNSPNQFSREYSRMFGLSPRKDALALR >gi|316917391|gb|ADCU01000024.1| GENE 50 63809 - 64570 196 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 253 4 242 242 80 28 7e-14 MKQNIKVAVITGGSRGLGRSTVINLAKRGVHSIFTFNSGEQEAKEVTQAATEAGAKAIAI HLNTANIAGFDAFSTQVKNALAELNTDKFNYLVNNAGISNHTPFMQVTEEELDLQFQVNF KGVFFLTQKLLPLLRDGGQIVNISSGVTRFVNPNSVAYATVKGAIEVFTRYMAHDLGPRN ISVNTVAPGAIQTDFSGGVVRDNPEINQLVSNMTALGRPGLPDDIGKMLASFLSDDNHWV NAQRIEVSGGMRL >gi|316917391|gb|ADCU01000024.1| GENE 51 64774 - 65742 823 322 aa, chain + ## HITS:1 COG:STM2314_1 KEGG:ns NR:ns ## COG: STM2314_1 COG0835 # Protein_GI_number: 16765641 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis signal transduction protein # Organism: Salmonella typhimurium LT2 # 1 189 1 189 189 266 68.0 3e-71 MDSFQKDIDERANLALSNKFELLLFRLGTSQHESKSELYGINVFKLREIVPMQKINRAAG MMSPLLGVVNIRDQIMPVIDLPAALGCTPETGLNLLLITEYARSTQAFAVESVDNIIRLD WSQVHAADSGVSSRNITSIASMEDENGNKDLALVLDVEQILYDIIPSGRDVDVDAIEEKI YALKPGALAIVAEDSKVARSMLEQGLKGMGIPALMHTTGLEAWEKIQSIAAEAKAAGQPI TDRIGLVLTDIEMPEMDGFTLTRNIKNEPALKHIPVVIHSSLSGSANEDHVRKVGANGYV AKFDVAELSAVIHKALADVAES >gi|316917391|gb|ADCU01000024.1| GENE 52 65848 - 66732 303 294 aa, chain - ## HITS:1 COG:SA0610 KEGG:ns NR:ns ## COG: SA0610 COG0657 # Protein_GI_number: 15926332 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Staphylococcus aureus N315 # 18 278 50 306 347 166 33.0 4e-41 MIPDISVLPDDYTKYTNNVTRVGDLHYPSKYGSSDFDIYYPSQSTFKASLPVIIWVHGGA FISGDKRNVESIVSMLASAGYVVIAMNYQLAPEARYPTPVLQVYELLNYLPSLALAYPQI DDKRVFLAGDSAGAQISAQSVLAMSNAKMRRELNITQSIPENIIRGVLLFCGPYSVEKTL AIDSPLIKQAFDTIGSAYLGKELWRQSKELEQFDIITNVTSKFPPTFIADGNYMSFSDQG KALADTLKNKNVPVQTTFFNGSRVIPHQYQVDFSRPEAWFTFFKAKGFLHQYSE >gi|316917391|gb|ADCU01000024.1| GENE 53 67521 - 67883 169 120 aa, chain - ## HITS:1 COG:VC1823 KEGG:ns NR:ns ## COG: VC1823 COG1445 # Protein_GI_number: 15641825 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Vibrio cholerae # 10 98 1 89 99 93 49.0 1e-19 MSSQKGTSKINILAVTACTTGVAHTYMAAEILEKLARKYDFNIKIETQGVLGIKNKLLES DIAQTDLVIVAADIVIDEPARFSGCRVINVKISSLLMDSSSLLVNIKKILHYSKGKTLDI >gi|316917391|gb|ADCU01000024.1| GENE 54 67899 - 68762 266 287 aa, chain - ## HITS:1 COG:STM4117 KEGG:ns NR:ns ## COG: STM4117 COG2207 # Protein_GI_number: 16767382 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 22 276 22 269 283 167 34.0 2e-41 MSAFIQSILSEYSSIYANSSAVFVANGRAEPPGMAYRLPLPRLELTVKGVMTMLVPKGTD KIMRFEQPVGTITYIPANGWNLPDWSTPVISLSLVLSRQDIGFSMINWDGHQFKEVEKFA LQHASVNIRDHILQLTEELAWSQDTTSETFSHLVLALANNIYDQLSQTTSNHINVSLIDD IKCYIDNNFDQSVSRDSVAAFFNISPSYLSRLFTRSSEVKFNEYLTQTRIAKSRLLLINT TLKIREISAKSGFIDNNYFCKVFKLINECTPMEYRKINRNHSLTNKS >gi|316917391|gb|ADCU01000024.1| GENE 55 68893 - 69843 704 316 aa, chain - ## HITS:1 COG:ECs3326 KEGG:ns NR:ns ## COG: ECs3326 COG0176 # Protein_GI_number: 15832580 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 312 1 312 316 391 62.0 1e-108 MNQLDQLKQHTVIVADSGDIDSILQYQPQDATTNPSLIYKAAQLPQYRTLLSDAIASVGE SYPNNAARAAAIADYLAVSIGTLILKRIPGRISTEVDARLSWDTEACINKARHLIRLYQQ QGVGKERVLIKLAATWQGIRAAAVLEKEGIQCNLTLLFSFAQARACADADVFLISPFVGR IYDWHQKNNPSQATTPENDPGVQSVRKIYQFYKMHGYRTIVMGASFRTPAQVLALNGCDR LTVSPALLAQLQNSNDCIAQPIVYNGDVAAKPAPLSEAEFNWLHHQDPMAVDKLAEGIRL FAVDQNNLEALIIELL >gi|316917391|gb|ADCU01000024.1| GENE 56 69981 - 70298 285 105 aa, chain - ## HITS:1 COG:STM4113 KEGG:ns NR:ns ## COG: STM4113 COG1445 # Protein_GI_number: 16767378 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 102 1 102 106 112 64.0 1e-25 MTILIAVTACPTGVAHTYMAAEALQTAAQKKGWSIKVETQGASGIENELNSADIENADMV ILTNDISIKNESRFNHKKIVRVGSNTAVRHADKIMVKIAENLGIE >gi|316917391|gb|ADCU01000024.1| GENE 57 70332 - 71582 1270 416 aa, chain - ## HITS:1 COG:no KEGG:CD0209 NR:ns ## KEGG: CD0209 # Name: not_defined # Def: putative sugar-phosphate kinase # Organism: C.difficile # Pathway: not_defined # 1 413 6 418 421 464 53.0 1e-129 MKNSLKQYVDYIVKGGKSSMLGIGPMSPALIQACFELGKEKDLPLMFIASRNQVDTDEFG AGYVNNWDQFRFAADLKAIAEKVGFDGDYFLCRDHGGPWQRDKERKDHIPEDQAMALARR SYEVDMDAGFDLLHIDPTKDPYVVGKAIDIEIVLQRTIDLIQFCEDYRKEKGLKQFYYEV GTEETNGGLTSIEAFEAFIIELNKRLDDAGLPRPLFIVGQTGTLTRLTRNVGHFNDIQAN QLSDISCQYGVGLKEHNGDYLSDDVLLKHPGLGITAMNVAPAYGTWETRAYLKLHEVEKD LAEKALIPTASNFKTVLTKACVLSHKWEKWITEEHKNKSEEQIFSEPDLLKEILELSGHY NYEKDDVVVEMKKMFANLSQFGVEPQRYVINKIKDIIQNEAECFNMPGLTSRVSEA >gi|316917391|gb|ADCU01000024.1| GENE 58 71601 - 72653 981 350 aa, chain - ## HITS:1 COG:STM4112 KEGG:ns NR:ns ## COG: STM4112 COG1299 # Protein_GI_number: 16767377 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Salmonella typhimurium LT2 # 1 341 4 344 359 285 51.0 6e-77 MLSLLKNTKRHFMTGVSYMIPFVVAGGVLLALAVMFSGKAAVPDHGFLKAMSDIGIAGLS LFIPILAGFIAYSMVEKPGIAPGAIGGYLANQMGAGFLGGMLAGIIAGLVVWMLLQIIAR LKVPDFLRMVLPIFVIPLVGTFLTGIAIYYVVGDPVAWIMKSLSVWLAGMQGASFVVLGI ILGCMITFDMGGPVNKTAFFFAVALISTNPQLMAAVAVPACTPPLGMALATFFFKGIFND EEREAGKPAFVMGCIGISEGAIPFAAADPMRVIPANMIGGAVGSVLALWFGATNAAPWGG LIVLPVVGNPIGYVIAVIAGAAATAIAVKVLKTVMKPRVKEQQDFDISFD >gi|316917391|gb|ADCU01000024.1| GENE 59 72697 - 75213 1482 838 aa, chain - ## HITS:1 COG:ptsA_1 KEGG:ns NR:ns ## COG: ptsA_1 COG1080 # Protein_GI_number: 16131785 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli K12 # 152 679 29 555 565 462 46.0 1e-129 MAEQLIYACKLKEGIHARPAGHIERLCNTFSADISWSNSRTGITANAKSALALVGTDTLF QDECKITLSGDDEFDACVQLADLLEKISLQEETHTEETPDVDLSLPRTLRETHPVYIRGT RISGGIAIARSVVSKSITFCQLESLAPVGYLGEKAELALFQQGIENLKNEKVTQLENACG VERDIIEAHLSIVNDITFAGQVTEYICQQHNAFSAVISAAIAFCDILNNSSSKYIKERVL DVMDITLQLLSKINSDIHLPHSRIELVESSILVADSLTPGKFMALDKTRLAGMVLSNTGK TSHTAILARSLGIPTITDLDDNAPSFDPDKLMVLDGNLGLLIPSPTNAVLRYYQSDIDAK TQKQKQMLAQVINPATTADGRRIEVAANIGSDLEAARAFSNGAEGIGLFRTELAFMDRAV PPTEDELTQQYIDVIKHANNQPVIFRTIDIGGDKPLEYLNIQPEENPFLGYRAIRIYPEF ITLFKTQLSAILRASASGYARIMIPMIASVEEVVWCREVLESVKIDLRANHIKFDENIEM GVMLEVPSVLFAVPEIARYADFFSVGSNDLTQYLFAADRGNTRVEHVYDNFSPAFLRALK FAVDEVHRQGRWIGICGELAANLQLLPLLIGMGFDELSMSSAAIPTIKSEIASMKQEQCG DLLQQALALGSSAEVRQILENPNVKITTSLPIISESCILNNLDLQNRNEVIKMLTDNLWL QDRTHNPEKLAEDVWAREDSFPTAVGYGFAIPHTKSDFITNSTISIAKLQKPIQWGEQQV NIIIMLTIRKSSTDNEHMKYFSQLARKIMNEDFRNEISRSNTKNDIYKVVAQAISTAI >gi|316917391|gb|ADCU01000024.1| GENE 60 75202 - 75372 88 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSHNYSALRIFSDIIFHVTHASILVGQKLFLHSKIVTFAVVEFYNSKSVIAISVL >gi|316917391|gb|ADCU01000024.1| GENE 61 75572 - 76225 280 217 aa, chain + ## HITS:1 COG:YPO2562 KEGG:ns NR:ns ## COG: YPO2562 COG0637 # Protein_GI_number: 16122780 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Yersinia pestis # 1 188 3 190 220 207 55.0 1e-53 MHCKALLFDLDGTLVTSLNFVEHSWTRWAEMHGLCALEVRNFLHGKPAISTLRHFLPQAS EAELHHQFLALEEYEATHTEGIEALPGASTFLTRLNELEIPWGIVTSGSMKVAAARIRQT GLPLPPVLITSENIIHGKPHPQPFLLGAERLGIQPEQCAAFEDSLAGLQSVWAAGCQAVE VKTAHSVPHNLGQIPALEDYCSIRISPRYDHFFLSFQ >gi|316917391|gb|ADCU01000024.1| GENE 62 76242 - 78233 1817 663 aa, chain + ## HITS:1 COG:STM3076 KEGG:ns NR:ns ## COG: STM3076 COG0021 # Protein_GI_number: 16766377 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Salmonella typhimurium LT2 # 1 663 1 663 663 1241 90.0 0 MTTRQELSNAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLNHNPQNPAWADRDRF VLSNGHGSMLIYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGV ANAVGMAIAERTMAAQFNRPGHNIVDHFTYTFMGDGCMMEGISHEVCSLAGTLGLGKLVA FYDDNGISIDGHVEGWFTDDTAKRFEAYGWHVVRGVDGHDADAIKRAVEEAKAVTDKPSL LMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTRAQLGWKYAPFEIPSEIYAQWDAKEAG QAKEAAWNEKFAAYAKAFPQEAAEFTRRMKGDMPAEFAAKAQEFIKNLQANPAKIASRKA SQNTIEAFGYLLPEFLGGSADLAPSNLTIWSGSKAINEDLAGNYIHYGVREFGMTAIANG IALHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPIEQLA ALRVTPNMSTWRPCDQVESAVAWKYAVERHDGPTALIFSRQNLAQQDRTEQQLADIARGA YVLKDCAGQPELILIATGSEVELAVAAWDQLSAEGIKARVVSMPSTDAFDKQDPAYREAV LPKAVAARVAIEASIADYWYKYVGLNGAVVGMTTFGESAPAEQLFEEFGFTVENVVKQAK AVL >gi|316917391|gb|ADCU01000024.1| GENE 63 78635 - 79627 828 330 aa, chain - ## HITS:1 COG:STM3755 KEGG:ns NR:ns ## COG: STM3755 COG3943 # Protein_GI_number: 16767039 # Func_class: R General function prediction only # Function: Virulence protein # Organism: Salmonella typhimurium LT2 # 1 330 16 345 345 587 96.0 1e-167 MFASDDGEVRVECRFEQETLWLSQATIASLYQITPQAVTQHIKAIYEEGELEQNATCKSY LQVQQEGGRQVSRNRLHYSLPVILAVGYRVRSPRGTQFRQWATQTLQEYLIKGFVMDDER LKNPPVGSSAVPDYFDEMLERIRDIRASERRVYLRVREIFALAADYQPSLKETTQFFQTI QNKLHFACTGHTAAELIHLRADASQPHMGLTSYKGEEVHKGDVTVAKNYLTQDEVSELNR VVNMWLDFAEDQARRRQQVFLRDWQDKLDQFLQFNDREVLQGAGTVSKKMADEKTQAEYS QFAEQQRRLKEAEGEKDIAALLQWKTEPKK >gi|316917391|gb|ADCU01000024.1| GENE 64 79760 - 79930 139 56 aa, chain - ## HITS:1 COG:no KEGG:plu0136 NR:ns ## KEGG: plu0136 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 1 56 222 277 277 113 92.0 2e-24 MDFVRDNPHQQVFEDDLFTIRYFQKGSGHITFKRLELVEKMNDIVAKHYLGALPAK >gi|316917391|gb|ADCU01000024.1| GENE 65 80428 - 81003 570 191 aa, chain + ## HITS:1 COG:STM1931 KEGG:ns NR:ns ## COG: STM1931 COG0693 # Protein_GI_number: 16765272 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Salmonella typhimurium LT2 # 3 184 2 183 185 243 63.0 1e-64 MSKKVAVLLAKGFEEAEAIMTIDVLRRLNISVTTLACQDMLEITSYHNIRMFADALLERN MDETFDAVVIPGGPEGTVNLAANPLVVEFIRRHDEAGKWICPICSAAARVLGGNHLLKGR RYTCSGELYQDVKDGIYVDEKIVEDGNLLSGKGLGVAFDFAFHLGWKLTGDSANVDFQVD HIYYDFWRTRA >gi|316917391|gb|ADCU01000024.1| GENE 66 81194 - 82651 518 485 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020673|ref|YP_526500.1| ribosomal protein L9 [Saccharophagus degradans 2-40] # 6 461 9 519 522 204 30 3e-51 MSNHILSMREKIGYGLGDAASHIVFDNVMFYMMFFYTDIFGIPAGFVGTMFLVARALDAI SDPVMGLVADRTRTRWGKFRPYVLFAAIPFGIVCVFAYSTPDLSLTAKMVYAACTYTLLT LMYTVVNIPYCALGGVITADPTQRISLQSYRFVLATAGGMLSTVLMMPLVNFVGKGNQAF GFQGGIAILALVAVFMLAICFATTKERISDEGAIQGSMREDLRDIMRNDQWRIVGLLTIF NILAVSVRGGAMMYYVTYVLGAPPEGSALFNLLSLLHNPPVFTVFLTVYCVGNLFGSAAA KPLTDWKCKVSVFWWTNAILTVLSVAMFFVPIGANITMFVFIFIIGILHQLVTPIQWVMM SDTVDYGEWKSGKRLTGISFAGTLFVLKLGLALGGALIGWMLAGSGYQSGAATQNSATMA SIIALFTLVPAICYFLSAVIAARLYTLRTPFINRILKELAAGVRRNEQEFNQEMKTSEDL SHENQ >gi|316917391|gb|ADCU01000024.1| GENE 67 82638 - 84962 1777 774 aa, chain + ## HITS:1 COG:STM3749 KEGG:ns NR:ns ## COG: STM3749 COG1501 # Protein_GI_number: 16767034 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Salmonella typhimurium LT2 # 1 763 1 764 772 1266 75.0 0 MKISDGNWLIQEGLSLIHPLYVFEVEQHDREMIVYAAPRDASVRSAQLDTPLFTLRLFSP QEGVIGVRIAHFAGRVERGPQYPLTHSTEHLIRMEDTHSFAALHSGNLSVRVTKGENWAL DFLRSGERITGSVAKSNGYVQNAKEGKTHLYERLDLGVGETVYGLGERFTAFVKNGQNVE TWNRDGGTSTEQAYKNIPFYLTNRGYGVLVNHPECVSFEIGSEKVSKVQFSVEGEYLEYL IFDGPTPKQVLDRYTRLTGRPALPPAWSFGLWLTTSFTTNYDEKTVNSFIDGMAERNLPL HVFHFDCFWMKAFQWCDFEWDAETFPDPQGMLKRLKARGLKICVWINPYIGQKSPLFKEG MEKGYLLKRPNGDVWQWDKWQPGQGIVDFTNPAACDWYANHLKRLIHMGVDCFKTDFGER IPTDVVWHDGSCPQKMHNHYAFIYNKLVYEVLQQTLGKDEAVLFARSASVGAQQFPVHWG GDCYANYESMAESLRGGLSLGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH GSKSYRVPWAYDDQACDVVRFFTEWKCRLMPYLYAASAQARETGSPVMRAMMLEFPDDPG CDYLDRQYMLGDSLLVAPVFSENGDVSVYLPTGRWTHLYTNQEVTGGWRKERHDFNSLPL YVRPNSLIAIGNNSQKPDYDYADGTVFHLFVLEDGALAQAVIPAADGSTQFTLSVRREGK QLHVSSTGNARNWSLCLRNIHSVSAATNGSVQSDEMGIIIIPQQGCGELTVSLK >gi|316917391|gb|ADCU01000024.1| GENE 68 85013 - 86173 858 386 aa, chain - ## HITS:1 COG:ECs0394 KEGG:ns NR:ns ## COG: ECs0394 COG2807 # Protein_GI_number: 15829648 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Escherichia coli O157:H7 # 1 381 1 380 384 442 74.0 1e-124 MLLVLVLIGLNMRPLLTSIGPLLPQLREASGMSFTAVSLLTALPVVAMGVLALAGGWVDR HFSERNSVALSLLAIAVGALLRELAPQSLLLLSSALLGGIGIGIIQAVMPAVIKRTFQRR MPLVMGLWSAALMGGGGLGAALTPWLAEHSDVWHRSLAWWALPALVALIGWWPQSKSLNQ PIKSSQLAQPLRLHLSPRAWTLGLYFGLINGGYTSLIAWLPPYYMQLGATAQFSGSLLAL MTVGQAAGALILPMFARKQDRRSLLMAALTLQLIGFCGFIWLPLQMSVLWAVVCGFGLGG AFPLCLVLALDHSPQPAIAGRLVAFMQGIGFIVAGLSPYLSGLLRSLSGNFLLDWMFHAV LVVGLMLLTLRFVPSHYPREWALSRH >gi|316917391|gb|ADCU01000024.1| GENE 69 86197 - 86655 548 152 aa, chain - ## HITS:1 COG:PA2499 KEGG:ns NR:ns ## COG: PA2499 COG0590 # Protein_GI_number: 15597695 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Pseudomonas aeruginosa # 3 152 2 151 151 153 50.0 9e-38 MSSHDEYLQRALALAAESVEQGGRPFGAVIVRNGEVVAEAVNTIHLNGDPTAHAELNGIR DVSTRHGSTALRECVVYASGQPCPMCLSAMYLTGVQAVYFANGNQDGEDYKLSTAAIYQQ LQLPLEQQTLPIHHLPQLNGRKLYERWAQKQS >gi|316917391|gb|ADCU01000024.1| GENE 70 87665 - 89323 1541 552 aa, chain - ## HITS:1 COG:YPO4083 KEGG:ns NR:ns ## COG: YPO4083 COG2985 # Protein_GI_number: 16124194 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Yersinia pestis # 1 552 1 552 552 839 83.0 0 MSDIALTVSMLALVAVLGLWIGNWRIYGVGLGIGGVLFGGIVVGHFAQSYDLSLNGDMLH FIQEFGLILFVYTIGIQVGPGFFSSLRVSGLRLNGFAILMVVLSGIVTALVHKIFDVPLP VILGVFSGAVTNTPALGAGQQILTDLGSDPALVDKMGMGYAMAYPFGICGILLVMWILRL IFRISVDAEAKDFDSKNGLKHELLQTMNISVRNPNLAGLPIRDVPIINSDEIVCSRLKRG EHLMVPMPNTILELGDLIHLVGQRQDLENARLVIGDQVDTSLSTRGTELQVSRVVVTNEK VLGKKIRDLNLKQKYDVVISRLNRSGVELVASSNASLQFGDILNLVGRPESIDQVADIVG NAQQKLQQVQMLPVFIGIGLGVLLGSIPLFIPGFPAALKLGLAGGPLVVALILGRIGSIG KLYWFMPPSANLALRELGIVLFLSVVGLKSGGNFIDTLVNGDGVSWIGYGILITAIPLLT AGILARAMAKMNYLTICGMLAGSMTDPPALAFANGLHPTSGAAALSYATVYPLAMFLRIM SPQLLAVIFWTM >gi|316917391|gb|ADCU01000024.1| GENE 71 89767 - 90417 563 216 aa, chain + ## HITS:1 COG:no KEGG:EFER_0928 NR:ns ## KEGG: EFER_0928 # Name: inaA # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 1 216 1 216 216 308 70.0 1e-82 MASKKELDEFQRWWATEGDWVEEPNERRKGMSGVQRIERDGKTLYVKRQVAHLFHSLRYP FGRPTIVREIQVINELAAAGVIVPKIVYGKALQINGEWRALLVTEDMKDFVSIGDWYEQN MHLDCSPEVKAEMFKQIAVAFKKMHSVNRQHGCCYVRHIYVKSRGEVLAGFLDLEKSRRR WVRQKAVLHDFKQLEKYLSPIPPEDWQKVKEQYYSL >gi|316917391|gb|ADCU01000024.1| GENE 72 90476 - 91456 808 326 aa, chain - ## HITS:1 COG:YPO4078 KEGG:ns NR:ns ## COG: YPO4078 COG1052 # Protein_GI_number: 16124190 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Yersinia pestis # 1 323 1 323 326 471 70.0 1e-132 MKPAIVLYKTLPADLRQKLNQYFNVTAFDELSHQTYPAFLQALKNAEGLIGSGGRIDADL LAQAPKLRAVSTISVGYDNFDVDEMTRRHILLMHTPTVLTETVADTLMGLMLATARRIPE LDAWVRAGHWNDSLDAKYYGTDVHHKTIGILGMGRIGMALAQRAHFGFGMKVLYNTRTPN LEANQKYAAQHCDLDTLLTQSDFVCITLPLTPQTHHMIGREQLDKMKKSAILINAGRGPV VDEDALVEALKDGTIHAAGLDVFEREPLPKDSELMTLKNVVLAPHIGSATHETRYGMAEC AVDNLIAALTGTAKENCVNPQVVHKK >gi|316917391|gb|ADCU01000024.1| GENE 73 91667 - 91789 69 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIDSLLAMISHGTELSAAAGHTSQTAFAAVLCAALFNFFG >gi|316917391|gb|ADCU01000024.1| GENE 74 91935 - 93356 1330 473 aa, chain - ## HITS:1 COG:YPO0022 KEGG:ns NR:ns ## COG: YPO0022 COG2204 # Protein_GI_number: 16120375 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Yersinia pestis # 4 473 2 470 470 847 91.0 0 MTTQQGIVWIVDDDSSIRWVLERALTGAGMRCVTFENGNQVLDALATQTPDVLLSDIRMP GMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERA ISHYQEQQQPARSQPVNDPAADIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELV AHALHRHSPRGKAPFIALNMAAIPKDLIESELFGHEKGAFTGANQIRQGRFEQADGGTLF LDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDL FHRLNVIRVHLPPLRERREDIPRLARHFLKVAATELGVEAKVLHPDTELALTRLPWPGNV RQLENTCRWLTVMAAGQELLVQDLPSELFETSVPETTGGTSPSGHWSALLAQWAEHALRS GHQDLLSEAQPEMERILLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME >gi|316917391|gb|ADCU01000024.1| GENE 75 93403 - 94479 940 358 aa, chain - ## HITS:1 COG:YPO0023 KEGG:ns NR:ns ## COG: YPO0023 COG3852 # Protein_GI_number: 16120376 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrogen specific # Organism: Yersinia pestis # 16 358 7 349 349 584 87.0 1e-166 MADQSLTDAQTARKQPDSGQILNSLITCVLLLDRNLAVHYANPAAQQLLAQSSRKLFGTP LPDLLGYFSLNVRLMHDSLHAGQGFTDNEVTLVIDGHAHIMALTAQPMSDDFILLELSPM DSQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLAKALPDQSLTEYTKVI IEQADRLRNLVDRLLGPQRPGQHVTQSIHQVAERVCQLVSLECPDNVTLVRDYDPSLPEL EHDPEQIEQVLLNITRNALQALGNAGGTITLRTRTAFQLTLHGERYRLAARIDIEDDGPG IPAHLHDTLFYPMVSGREGGTGLGLSIARNLIDQHQGKIEFNSWPGHTEFSVYLPIRK >gi|316917391|gb|ADCU01000024.1| GENE 76 94739 - 96148 1368 469 aa, chain - ## HITS:1 COG:YPO0024 KEGG:ns NR:ns ## COG: YPO0024 COG0174 # Protein_GI_number: 16120377 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Yersinia pestis # 1 469 1 469 469 914 93.0 0 MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNADFFEEGKMFDGSSIGGWKG INESDMVLMPDASTAVLDPFFEEPTLIIRCDILEPGTMQGYDRDPRSISKRAEDFLRSSG IADTVLFGPEPEFFLFDDIRFGSSIRGSHVAIDDIEGAWNSSTKYEGGNKGHRPAVKGGY FPVPPVDSSQDIRSTMCLTMEDMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYK YVVHNVAHAFGKTATFMPKPMFGDNGSGMHCHMSLSKNGTNLFAGDKYGGLSEMALYYIG GVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEVR FPDPAANPYLCFAALLMAGLDGIANKIHPGDAMDKNLYDLPPEEAKEIPTVAGSLDEALA CLDADREFLTRGGVFTDDAIDAYIALRQEEMERVRMTPHPVEFELYYSV >gi|316917391|gb|ADCU01000024.1| GENE 77 96515 - 98338 1872 607 aa, chain + ## HITS:1 COG:YPO0026 KEGG:ns NR:ns ## COG: YPO0026 COG1217 # Protein_GI_number: 16120379 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Yersinia pestis # 1 606 1 606 607 1108 91.0 0 MIENLRNIAIIAHVDHGKTTLVDKLLQQSGTFGEREEATERVMDSNDLEKERGITILAKN TAINWKDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANG LKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHNDMA DDMTPLYQAIVDHVSPPQVEADAPFQMQISQLDYNNYVGVIGIGRIKRGKIKPNQQVTLI DSEGKTRNGKVGKVLTHMGLERIEADVAEAGDIIAITGLGELNISDTICEVGNVEALPAL SVDEPTVTMYFCVNTSPFCGKEGKYVTSRQILERLQKELVHNVALRVEETEDADAFRVSG RGELHLSVLIENMRREGFELAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMG ERKGDVKNMVPDGKGRIRLDYIIPARGLIGFRTEFMTMTSGTGLLYSTFSHYDDVRPGDI GQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHTRSNDLTVNCLTG KKLTNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPVSVRIRKRHLTENDRRRA ARGPKED >gi|316917391|gb|ADCU01000024.1| GENE 78 98436 - 100067 1084 543 aa, chain - ## HITS:1 COG:ECs2595 KEGG:ns NR:ns ## COG: ECs2595 COG0840 # Protein_GI_number: 15831849 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli O157:H7 # 1 520 1 514 533 300 39.0 7e-81 MFKNLKIRTGLLLLLAVFAILQLAASGMGIYFINQNDKDINFLETTANEQKVLSDSRDAV LRLRSIIDSTFIQLTNRMPVNVPQVVKALRHELQTSQQNFELFMKIPGLTMEQPELGKIM KKAQEDQVASALTNIGIFENFTTPEQLQKSMADYQDARQKARSGYDEKYKNYEQLRQENL VKISNISKASYRISILVMCAILVVVALLFLAAYFWLDRILVKPLSKVSGYFEQIGKGDLR HTIEVENNNEIGRLCASLQEMQYELIETVKSIRDGVESINIGTQEISAGNTDLSSRTEEQ ASALAQTAASMEQISSTVKLNADNAVQASSMIQASATIANEGEQQMKEMNSKMHVIKTNA QKMGDIISVIDSIAFQTNILALNAAVEAARAGEAGRGFAVVASEVRNLAQRSAQSAKEIN SLISESSHHIQEGAELADKTGLTIAEMTGAITKASTMMDSISYASEEQSRGVEQIRVAIT QMDQVTQQNAALVEQVATTATNVEELSGSLSNAVAVFQIKGMNDKLSAKQTAAKVTDLDE NWI >gi|316917391|gb|ADCU01000024.1| GENE 79 100366 - 100953 612 195 aa, chain + ## HITS:1 COG:YPO0027 KEGG:ns NR:ns ## COG: YPO0027 COG1011 # Protein_GI_number: 16120380 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Yersinia pestis # 1 195 1 195 196 304 74.0 7e-83 MLYIFDLGNVIVDIDFKRVLGVWSKYSGVPLATLSERFKMGEVFQQHERGTITDEEFAEK LCAEMGIALSFEQFELGWQSIFVGLRPEVIEQMKKLRSYGNRVVVLSNTNRLHSNYWPKH YPEVEAASDHMYLSQDLGMRKPEAEIYRYVLEQEHCPASDAVFFDDNEENVTAARALGIK SILVTDNKVVPEYFA >gi|316917391|gb|ADCU01000024.1| GENE 80 101029 - 101982 524 317 aa, chain + ## HITS:1 COG:YPO0028 KEGG:ns NR:ns ## COG: YPO0028 COG1295 # Protein_GI_number: 16120381 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 29 313 14 293 294 375 69.0 1e-104 MFNRSGSNFVVWALFSGGVMSLFSRQSAKSCVSFGRLLWARVNHDRVSMMAGSLAYISLL SLVPLVTVIFSLFAAFPMFGEVSEQLKHFIFTNFVPAAGDVVQSYLEQFVANSSKMTAVG AVGLIVTALLVISSVDGALNHIWRSRTQRPIVYSFAIYWMVLTLGPILVGASMAISTYLL SIRWLAMAGVYSLVDQVLRIFPLLLSCASFWLIYCVVPTQRVPARDALCGAIVAGLLFEL GKKAFGLYVTMFPSYQLIYGVLAVIPILFVWVYWSWCIVLLGAEITVSLSEYRAMHQRER REESKQIQLTSPENDKE >gi|316917391|gb|ADCU01000024.1| GENE 81 101992 - 102429 424 145 aa, chain + ## HITS:1 COG:YPO0029 KEGG:ns NR:ns ## COG: YPO0029 COG1490 # Protein_GI_number: 16120382 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Yersinia pestis # 1 145 1 145 145 234 83.0 3e-62 MIALIQRVTQASVVVEGNTVGEIGPGLLVLLGVEKDDNEQKAQRLRDKVLGYRIFSDEND KMNLNVTQAGGSVLVVSQFTLAADTQKGMRPSFSGGAAPDEAERLYEYFVGQCRETGINT QTGQFAADMKVSLLNDGPVTFWLQV >gi|316917391|gb|ADCU01000024.1| GENE 82 102511 - 103440 757 309 aa, chain + ## HITS:1 COG:YPO0032 KEGG:ns NR:ns ## COG: YPO0032 COG0454 # Protein_GI_number: 16120385 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Yersinia pestis # 1 307 1 307 307 574 88.0 1e-164 MYHLRVPVTEQELKDYYQFRWEMLRKPLHQPVGSERDAYDAMAHHQMVVDESGKPVAIGR LYINADNEASIRFLAVDPAVQAKGLGTLVAMTLESVARQEGVKRVVCSAREDAVEFFAKL GFENQGEITAPQTTPVRHFLMIKPVATLDDILHRPDWCAQLQKAWYENIPLSEKMGVRIS QYTGQRFVTTMPESGNQNPHQTLFAGSLFSLATLTGWGLIWLLLRERHLGGTIILADAHI RYSAPITGRPRAVADLSSVSGDLDRLARGRKARVQLSVNLYGDEHAGAVFEGTYMVLPAT EDDEEGNIQ >gi|316917391|gb|ADCU01000024.1| GENE 83 103492 - 104724 1227 410 aa, chain - ## HITS:1 COG:ECs0922 KEGG:ns NR:ns ## COG: ECs0922 COG0477 # Protein_GI_number: 15830176 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 405 1 405 410 586 79.0 1e-167 MQKSLSAAGRLGRQALLFPLCLVLYEFTTYIGNDMIQPGMLTVVQEFNVGQEWVPTSMTA YLAGGMFLQWLLGPLSDRIGRRPVMLTGVAYFVVTCLAILLAQTIEQFTLLRFLQGVSLC FIGAVGYAAIQESFDEAVCIKITALMANVALIAPLLGPLAGAAWVHVFPWQMMFVMFAAL AAFAFYGLWRAMPETATRRGEKLSLQALGSDYKQVLSNRHFLCGALATGFASLPLLAWIA QSPVIIISGEGLSSYDYGLLQVPVFGALILGNFTLAKLTSKRSVRSLIKLGAWPMMFGLA LAAIATVHASHAYLWMTAGLSIYAFGIGIANAGLYRLTLFSSDMSKGTVSAAMGMLSMLI FTVGIELTKHAYLLGGNSWFSLFNLMSGIIWLTLVVLFLRNKQVGMPQAA >gi|316917391|gb|ADCU01000024.1| GENE 84 104998 - 105993 469 331 aa, chain + ## HITS:1 COG:YPO4045 KEGG:ns NR:ns ## COG: YPO4045 COG3274 # Protein_GI_number: 16124163 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 331 1 330 330 375 62.0 1e-104 MSQKIIWIDNLRAVACLMVVMIHSTTYYVTNGFSIGLFNWDVANILNSASRVCVPLFFMI SGYLFFGEKSAQGRHVLHVLRCLLFYSALGLLYISTLTHINPWLSVRYFLVKPVFYHLWF FYAILALYIISPLISVRAVSARYLVVVVAVLAVIANPNLPAYSYAGIKLLPVNLHISGDM FYYLLYALMGRALGMLHTERARISWGAALIFIGCVLAIAFSTYRQTQHNGGFTDTYYMYC GPLVFIASCAILLFFKNNFNHSQAGWMAFISRHSLAIYGFHAFFIHFIRTHHFDIRSWPL LDIFLVFGLALAGSLACSWGLGKIDRKGWVS >gi|316917391|gb|ADCU01000024.1| GENE 85 106105 - 107286 928 393 aa, chain - ## HITS:1 COG:YPO4034_1 KEGG:ns NR:ns ## COG: YPO4034_1 COG1609 # Protein_GI_number: 16124154 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 254 1 254 265 473 88.0 1e-133 MFAKRYRITLLFNANKAYDRQVVEGVGEYLQASQCDWDIFIEEDFRCRIDNIKDWLGDGV IADFDDREIEALLRGVDVPIVGVGGSYHREEDYPPVSYIATDNHALVESAFMHLKEKGIN RFAFYGLPSSSGKRWAQEREYAFRQLVATEQYQGVVYQGLETTPDNWQYAQNRLADWVQT LPPQTGIIAVTDARARHLLQVCEHLDIAVPEKISVIGIDNEELTRYLSRVALSSVAQGTR QMGYRAAKMLHQLLSSDSPIAPQRILVPPMRVVERRSTDFRSLRDPSVIQAMHFIRHHAC KGIKVEQVLDAVGMSRSNLEKRFKDETGHTIHAVIHEEKLDRARNLLIATSLSINEISQM CGYPSLQYFYSVFKKGYQMTPKDYRDRYGDNMA >gi|316917391|gb|ADCU01000024.1| GENE 86 107400 - 108875 1319 491 aa, chain - ## HITS:1 COG:ECs5014 KEGG:ns NR:ns ## COG: ECs5014 COG0477 # Protein_GI_number: 15834268 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 491 1 491 491 761 79.0 0 MKQHYNSSYIFRITLVATLGGLLFGYDTAVISGTVDSINQVFVQPQGLGEAAANSLLGFC VASALIGCIIGGAMGGYLSNRFGRRNSLMIAALLFLISAIGSAWPELGLSDINPDGGIPV YLAGYIPEFVIYRIIGGVGVGLASMLSPMYIAEVAPADIRGKLVSFNQFAIIFGQLMVYC VNYSIARSGDALWLNSIGWRYMFASEAIPAILFFGLLFTVPESPRWLIARGQTQRAGDVL TRIMGKLQADVALKNITRSLNNPEHTSGRLMMFGAGVIVIGIMLSVFQQFVGINVVLYYA PEVFKTLGASTDIALLQTIIVGVINLTFTVIAIMTVDKFGRKPLQIIGALGMSLGMFGLG TAFYAQLSGVVALASMLFYVAAFAMSWGPVCWVLLAEIFPNAIRSKALAIAVAAQWIANY FVSWSFPMMDKNSYLVAHFHNGFSYWIYGVMGILAALFMWKFVPETKGKSLEELESLWTY RPRAQEQDIKL >gi|316917391|gb|ADCU01000024.1| GENE 87 109210 - 110571 1342 453 aa, chain + ## HITS:1 COG:STM3661 KEGG:ns NR:ns ## COG: STM3661 COG2115 # Protein_GI_number: 16766946 # Func_class: G Carbohydrate transport and metabolism # Function: Xylose isomerase # Organism: Salmonella typhimurium LT2 # 15 452 1 438 440 831 89.0 0 MEGLITLNLFEGITMQAYFDQLERVRFEGTNSTNPLAFRHYNPDEIVLGKRMEDHLRFAA CYWHTFCWNGADMFGIGSFDRPWQQPGEALAQAKRKADVAFEFFHKLNVPYYCFHDIDVS PEGASLKEYINNFAVMTDVLAEKQETSGVKLLWGTANCFTNPRYGAGAATNPNPEVFAWA ATQVCQAMQATKKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVDHKHKIGFQ GTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAGHTFHHEIANA IALGIFGSVDANRGDAQLGWDTDQFPNSVEENALIMFEILKAGGFTTGGLNYDAKVRRQS TDKYDLFYGHIGAMDTMALSLKIAAKMIEDGELDRRVAKRYAGWNGEFGQQILQGKLSLD AIAQYAQQNQLAPQHQSGHQELLENVVNRYIFG >gi|316917391|gb|ADCU01000024.1| GENE 88 110648 - 112117 1006 489 aa, chain + ## HITS:1 COG:YPO4039 KEGG:ns NR:ns ## COG: YPO4039 COG1070 # Protein_GI_number: 16124159 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Yersinia pestis # 1 482 1 482 484 692 74.0 0 MYLGIDLGTSGVKAILLSEDGKVIASHGEPLQVNRPHPLWSEQNPDAWWQATDAAIQALG QHRSLSAVRAIGLTGQMHGATLLDKQHKILRPAILWNDGRSAQECLELEQCVPNSRQITG NLMMPGFTAPKLKWVAKHEPEIFAQVDKVLLPKDYLRWKMSGVFASDMSDAAGTMWLDVG KRDWSDELLAATGLKRSHMPALFEGSQITGELLSTLAERWHMPVVPIIAGGGDNAAGAVG VGLYQSGQAMLSLGTSGVYFAVSDGFLSNPESAVHSFCHALPNTWHLMSVMLSAASCLDW VAKLTGIRSVAELLKEVENSTPAEAPLWFLPYLSGERTPHNNPEAKGAFWGLTHEHQRAD LCRAVLEGVGYALADGMDVLHATGLKPHSITLIGGGARSAYWRQMLADISGQTLEYRTGG DVGPALGAARLAQIALHPNTPLADLLPELPLEQMHKPDAARHACYQKRRKVFRELYKVLE PLTAQTMSM >gi|316917391|gb|ADCU01000024.1| GENE 89 112411 - 113319 809 302 aa, chain + ## HITS:1 COG:STM4105 KEGG:ns NR:ns ## COG: STM4105 COG0685 # Protein_GI_number: 16767371 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Salmonella typhimurium LT2 # 1 294 1 294 296 567 90.0 1e-161 MSFFHANQREALNQSLAELHGQINVSFEFFPPRTSEMEDTLWQSIDRLSSLKPKFVSVTY GANSGERDRTHSIIKGIKERTGLEAAPHLTCVDATRDELRTIAQDYWNNGIRHIVALRGD LPAGGGKPDMYACDLVSLLKEVGDFDISVAAYPEVHPEAKSPQADLINLKRKIDAGANRA ITQFFFDVESYLRFRDRCVATGIDVEIVPGILPVSNFKQLQRFATMTNVRVPHWMTNMFE GLDDDAETRKMVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGVRPEIHAPI TA >gi|316917391|gb|ADCU01000024.1| GENE 90 113431 - 113751 433 106 aa, chain - ## HITS:1 COG:YPO0114 KEGG:ns NR:ns ## COG: YPO0114 COG3060 # Protein_GI_number: 16120460 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulator of met regulon # Organism: Yersinia pestis # 3 106 2 105 105 196 94.0 8e-51 MAAEWNGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLC EAFLHAFTGQPLPNDADLRKERSDEIPEAAKLLMREMGIDPDTWEY >gi|316917391|gb|ADCU01000024.1| GENE 91 114027 - 115190 909 387 aa, chain + ## HITS:1 COG:metB KEGG:ns NR:ns ## COG: metB COG0626 # Protein_GI_number: 16131777 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Escherichia coli K12 # 1 385 1 385 386 661 84.0 0 MTYKQATLAVRSGLNDDEQYGCVVPPIHLSSTYNFTDFNEPRAHDYSRRGNPTRDVVQRA LAELEGGAGAVMTSSGMSAIHLVCTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGAYNVL FVDQGDAQALAAALEQKPKLVLIETPSNPLLRVVDIAAICSAAKAAGALTVVDNTFLSPA LQQPLKLGADLVLHSCTKYLNGHSDVVAGTVIAKSPEHVTELAWWANNIGVTGGAFDSYL LLRGLRTLNPRIQLQQQNALKIVDFLKQQPLVKKLYHPSLPENQGHEIACRQQSGFGAML SFELDGDEALLRRFLNALQLFTLAESLGGVESLISHAGTMTHAGMAPEARKAAGISESLL RVSVGIEDSDDLISDLEQAFQKANRQR >gi|316917391|gb|ADCU01000024.1| GENE 92 115247 - 117682 2452 811 aa, chain + ## HITS:1 COG:YPO0116_1 KEGG:ns NR:ns ## COG: YPO0116_1 COG0527 # Protein_GI_number: 16120461 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Yersinia pestis # 12 449 12 449 449 707 79.0 0 MSAQPVAGQAVGRQLHKFGGSSLADVKCYLRVAGIMAEYSFPGDMMVVSAAGSTTNQLIS WLRLSQTDRISAHQVQQALRRYQSELITGLLPAELAEPLVARFTSDLERLATLLDEPMCD ATYAEVVGHGEIWSARLMSALLNVKGMESEWLDARDFLRAERSAQPQVDEGRSYPLLQQL LAQHPNKRLVATGFISRNDAGETVLLGRNGSDYSATQIGSLAGVSRVTIWSDVAGVYSAD PRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSASDIDLQLRCSYQPEQGSTRIE RVLASGTGAKIVTSHDEVCLIELNVPQSHDFENVRQEVDRVLKRSQLRPLATGVHRDRHM IQLCYTAEVVGSALKLLEESGVPGLLQLREGLALVALVGAGVCKNPLHSHRFYQQLKDQP IEFFCQSEDSISLVAVLRRGPTEALIQGLHTSLFRAEKRVGLVLMGKGNIGSRWLELFAR EQENISARSGFEFVLAGVVDSSRSLLNYEGLDASRALAFFDDEAQEMDEENLFLWMRAHP YDDLVVLDVTASESLAQQYRDFASYGFHVISANKLAGASGSDEYRQIRDAFEKTGRHWLY NATVGAGLPVNYTVRDLRDSGDSILSISGIFSGTLSWLFLQFDGTVPFTDLVDQAWQQGL TEPDPRVDLSGQDVMRKLVILAREAGYDIEPNQVRVESLVPAGCESGSIDHFFENGEDLN EQMIQRLEAANELGLVLRYVARFDANGKARVGVEAVRPEHPLAALLPCDNVFAIESRWYR DNPLVIRGPGAGRDVTAGAIQSDLNRLAALL >gi|316917391|gb|ADCU01000024.1| GENE 93 118307 - 121021 2006 904 aa, chain - ## HITS:1 COG:YPO0123 KEGG:ns NR:ns ## COG: YPO0123 COG2909 # Protein_GI_number: 16120468 # Func_class: K Transcription # Function: ATP-dependent transcriptional regulator # Organism: Yersinia pestis # 1 902 1 902 903 1399 80.0 0 MLIPSKLSRPVRLQNTVVRERLLTKLASAGNYRLVLVNGPAGYGKTTLLAQWAEENTNLG WFSLDESDNQPERFASYLIAALQQATGGHCHKSEAMSQKHQYATLSALFAQLFIELSDWH SPLCLVIDDYHLITNAQIHEAMRFFLRHQPDNLTVMLLSRTLPPLGIANLRVREQLLEVG TKQLAFNHQEASQFFNHRLKSPLPDIESHQLCDEVEGWPTALQLIALSVRQSTTTAQESA RRLAKINASHLSDYLVDEVLDRVDASTRNFLLRCSVLRSMNDALLVRLTGEDNGQQQLEE LERQGLFIHRMDADGEWFCFHPLFANFLRQRCQWELAADLPDLHRRAAQGWLDQGFPAEA IHHALAAGDVDMLRDVLLQHAWELFHQSELSLLEECLNALPYEKLIQNPRLALLQAWLAQ SQHRYSEVNTLLERAEHEMNVQNIVIDAAMLAEFDALRAQVAINDGLPDEAEKLAVEALK HLPISSYYSRIVTSSVIGEVHHCKGDLSRALPMMQQTEQVARRHQAYHYALWAMLQQSEI LIAQGFLQAAYETQEKAFELIDEQHLEQLPMHEFLLRIRSQVLWSWMRLDEAEEAARKGL AVLANYEPQQQLQCLAMLAKCSLARGDLDNANQYLRRCENLLQSGHYHRDWQTNADKPRV IAWQMTGDRAAASQWLMQAEKPSRADNHFLQGQWRNIARVQILLGRYEEAEVVLDELNEE ARRLRLVSDLNRNLLLCNLLYWNTDRKSEALRVLIEALNLANRTGFVSHFVIEGEVMAQQ LRQLLQLNTLPELDQHRAQRILRDINQHHRHKFAHFDESFVERLLNHPQVPELIRTSPLT QREWQVLGLIYSGYSNEQIASELDVAATTIKTHIRNLYQKLGVAHRQEAVQQAQNIMKMM GYGV >gi|316917391|gb|ADCU01000024.1| GENE 94 121257 - 121478 79 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRGGGAGRSQNCDPYLLSVVQQMEKSSFDNLNVTPKTQFLYKKPTTKLLRIDMKCEEAE NICFGVSKETSVT >gi|316917391|gb|ADCU01000024.1| GENE 95 121561 - 123969 2261 802 aa, chain + ## HITS:1 COG:STM3514 KEGG:ns NR:ns ## COG: STM3514 COG0058 # Protein_GI_number: 16766802 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Salmonella typhimurium LT2 # 1 802 1 797 797 1254 75.0 0 MSHIPFDKDVFLAALTRQWQHFGLTASSQMTEHQWWQAVSAAIAEQLSALPQPKALAKSD LRHVNYLSMEFLIGRLTANNLINLGWYDAVEKALAKHDVLLSDLLEQETDPALGNGGLGR LAACFLDSMATVEQPATGYGLCYQYGLFRQSFSDGHQMEAPDNWERESYPWFRHNSALNV DVNFGGKLIKQKDGNVLWQPALTLRGEAWDLPILGYHNGVSQPLRLWQATHAHPFDLTKF NDGQFLKAESDGIEAAKLTKVLYPNDNHQAGKRLRLMQQYFHCACSVADILRKHHLAGRK LADLPKYEVIQLNDTHPTIAIPELLRVLLDEHQMSWDDAWAITSNTFAYTNHTLMPEALE CWDERLVRSLLPRHFDIIKQINARFKKQVQKQWPGDEAVWSKLAVHHNKQVRMANLCVVG GFAVNGVAQLHSDLVVKDLFPEYYQLWPNKFHNVTNGITPRRWLKQCNPALAGLIDSTLK TEWSNNLDALKTLEPYADDANFRQKYQSIKRENKIALAKYVKNVMGLELNVDAIFDVQIK RLHEYKRQHLNLLHILALYHELRDNPQANRVPRVFLFGAKAAPGYYLAKNIIYAINKVAE KINNDPLMKGRLQVAFIPDYRVSVAELMIPAADISEQISTAGKEASGTGNMKLALNGALT VGTLDGANVEIAQEVGEENIFIFGQTVEQVKATLAKGYQPKAIYRKDKQLKLILDELAKG HYSNGDKHAFEPMLHSLLDGGDPYLVLADFADYCRAQQEVDVLYRDQDKWTRATILNTAR VGMFSSDRSIRDYQQRIWQAKR >gi|316917391|gb|ADCU01000024.1| GENE 96 123981 - 126140 1556 719 aa, chain + ## HITS:1 COG:YPO0126 KEGG:ns NR:ns ## COG: YPO0126 COG1640 # Protein_GI_number: 16120469 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Yersinia pestis # 19 717 2 696 698 1028 69.0 0 MKEKTTPPMEQITQHQQDERKLLESLAAQAGIAASYINAHGQQQAISTETKQRLLEAMHP FTPTQVGSPVPPVVVFTQGRPCHLNLQTVGEYTWTLTLESEPADKQARTGVHNGKVQRRK NLTLPRDLPLGYHQLTLRDEQQAWTCQIIVTPTRCFEPDALLTGRKLWGACVQLYTLRSD NNWGIGDFGDLKQMVLNVAKRGGAFVGLNPIHSLYPANPESASPYSPSSRRWLNVAYIDV NQVEEFKHSAEAQAWWNNAETQLRLSEARASEWVDYTSVITLKLNALQRAYPEFTKQKSS SKRLKAFQHFVQQGGESLYQQAAFDALHAHLSAQDPTMWGWPVWPDNLRNADSSGVAEFC HQHADKVDFYLWLQWLAYCQLSECFEVCQQQKMPIGLYRDLAVGVAEGGAETWGENGLYC LKASVGAPPDILGPLGQNWGLPPMDPHVMAARAYQPFIDMLRANMTCCGALRIDHVMSML RLWWIPYGETADKGAYVRYPVDDLLAILALESQRNHCMVIGEDLGTVPVEIIAKLRDCGV YSYKVLYFEHDQDNSFRAPQSYTVQAMATITTHDLPTLRGYWQADDLHLGRELGLYPDLD VLRQLHADREAAKQGLLNGLHQYGCVPKKVGHRANHLAMSPTLNRGLQRYVADSASALLG LQPEDWLDMEKPVNIPGTSDQYPNWRRKLTHTLEEMFNDPNVNLLIRDLDKRRRKVSAE >gi|316917391|gb|ADCU01000024.1| GENE 97 126472 - 128691 1506 739 aa, chain + ## HITS:1 COG:YPO3942 KEGG:ns NR:ns ## COG: YPO3942 COG0296 # Protein_GI_number: 16124070 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Yersinia pestis # 1 723 1 723 727 1124 73.0 0 MSVLPSSQMMHQLLSGQCADPFSILGMHNTSKGLVVRALLPDATSVQVLDRKTMRKVAEL ERIDERGFFSGLLPRRKAPFDYLLRVEWNDHQQIIEDPYRFGPLLGEIDNWLLTEGKHLR PYERLGAHPTHLADISGVSFAVWAPNAHRVSVVGEFNFWDGRRHPMRIRQESGIWELFIP GVHAGQLYKFELIDANGKTVLKADPYAFEAQMRPDTASLITQLPPKVPTDEKRSAANQLN APISIYEVHLGSWRRHSDNNFWLSYREMAEQLVPYVKEMGFTHLELLPINEHPFDGSWGY QPLGMYAPTRRFGTPEDFRYFMDKAHEAGINVLLDWVPGHFPSDIWGLAEFDGTDLYEYS DPREGYHQDWNTLIYNYSRYEVRNFLAGNALYWMERYGIDGLRVDAVASMIHRDYSRKEG EWIPNCFGGNHNLEAIDFLRYTNKTIGEQRPGAVTMAEESTDFPGVTLPPDANGLGFHYK WNMGWMHDTLDYMKLDPVHRKYHHNLMTFGLLYAWSENFVLALSHDEVVHGKRSMLDKMP GDAWQKFANLRAYYGFMWAHPGKKLLFMGCEFAQGREWNFETSLDWHLLEGEDNWHNGVQ RLVRDLNHCYRDYPALHRWDCDSRGFSWRVVDDHENSVFAFVRRDEVGNEVLVVSNFTPV PRSYYRIGVEYAGHYSEILNTDSFYYHGSNSGNQGGIDSQPVGSHGCEHSIELTVPPLAT LYLQLTPPLQEELIDAETR >gi|316917391|gb|ADCU01000024.1| GENE 98 128675 - 130654 1217 659 aa, chain + ## HITS:1 COG:glgX KEGG:ns NR:ns ## COG: glgX COG1523 # Protein_GI_number: 16131305 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Escherichia coli K12 # 2 658 4 657 657 817 60.0 0 MLKPGKPGPLGAHITPEGINFALFSSHATRVELCIFDKSGHQESYELPARSGDVWHGLLT GAKAGLEYGYRVHGDWRPEKGQRFNPAKLLIDPYARVLTGTLPLDERLSGGLNEPDWRDN RDVVPHCIVSEEAYDWGNDRPPNVLWGDTIIYEAHVRGLTQQHPDIPEELRGSYAALSHP VMIEYFKRLGITALELLPVQLHADEPRLQKIGLTNYWGYNVLAPFAIEPSFHSGSAKTTP LSEFRDAVKALHAAGIEVILDIVFNHTAELDETGPMVSLRGIDNRSYYWRNSHGALENWT GCGNALRLTQPHSVQWVMDCLRYWVEECHVDGFRFDLGTILGRNADFHRHAPLFITIAQD PVLARVKFIAEPWDIGPNGYQLGHFPLTFSEWNDRYRDEIRQFWLWGNISAGVFAERFAA SSQLFRHHGRAPSSSINQITAHDGFTLHDLVSFNDKHNLANGEENRDGTNSNYSNNHGVE GLDANEDIQRHRNRSQRALLATLLLSQGAPMLLAGDEMGHSQQGNNNAYCQDNEIAWLDW SCADVALTEYTASLIQLRKRIPALCANRWWDENDGSVRWLNANAKPLTTEEWQSQSPTLL QVQLSGDWLMIVNPAQHDVEIGLPAGHWQVSAPFKMLTAGSNSAQAIMPAHSVCVLTRS >gi|316917391|gb|ADCU01000024.1| GENE 99 130720 - 132003 897 427 aa, chain + ## HITS:1 COG:ECs4275 KEGG:ns NR:ns ## COG: ECs4275 COG0448 # Protein_GI_number: 15833529 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Escherichia coli O157:H7 # 1 427 1 425 431 720 79.0 0 MVKSENQNQLMLARQLPQKSVALILAGGRGSRLKDLTKTRAKPAVHFGGKFRIVDFALSN CINSGIRRIGVITQYHSHTLVQHIQRGWSFLNESMNEFVDLLPAQQRDASEHWYKGTADA VYQNLDIIRRYHAEFVVILAGDHIYKMDYSRMLIDHVESGAECTVACIPVPRHEASEFGV MEVGDDNKILQFLEKPQNPPAMPGSEDMSLASMGIYVFNAEYLYQLLEEDMSLADSFHDF GKDLIPKITAQGKAWAHPFTLSCVTSTDDDTVQPYWRDVGTLDAYWRANLDLASVTPELD MYDKRWPIRTYMESLPPAKFVQDRSGSHGMTMNSLVSGGCIISGSVVVHSVLFPRVRVNS FCTIDSSVLLPDVNIGRSCRLRRCIIDRACVLPEGMVIGENVEEDSKRFYRSEGGIVLVT REMLARL >gi|316917391|gb|ADCU01000024.1| GENE 100 132050 - 133480 1073 476 aa, chain + ## HITS:1 COG:YPO3939 KEGG:ns NR:ns ## COG: YPO3939 COG0297 # Protein_GI_number: 16124067 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Yersinia pestis # 1 476 1 476 476 745 76.0 0 MYVLHVCSELFPLLKTGGLADVVGAMPAAQIAQGANVRVLLPGFPALKEGIPETHEVATL DTFAGRITLRFGHFQGVGIYLIDAPHLYDRPGSPYHDQAMYAYSDNHRRFGLLGWVAAEL ASGCDHYWRPQVVHAHDWHAGLACAYLAARGRPARSVFTVHNLAYQGLFSAHHMAELYLP QDFFQIYGLEFYGQISFLKAGLFYADHVTTVSPTYAKEITRPEFAYGMEGLLQQLLREGR LSGILNGVDDAIWNPATDELIANPYQRENLKDKAVNKQHLQTAMGLDVDPEKPIFAVVSR LTSQKGLDLVLEALPTLLKGGGQLALLGAGDAPLQEAFLAAAAAYPGQVGVQIGYHEAFS HRIIAGADVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVNDCSLENLSEGSASG FVFNECDAKDLSNALRRAFVLWTRPTLWRYVQRQAMAQNFSWEKAAVSYLDLYNRL >gi|316917391|gb|ADCU01000024.1| GENE 101 133575 - 136022 1685 815 aa, chain + ## HITS:1 COG:YPO3938 KEGG:ns NR:ns ## COG: YPO3938 COG0058 # Protein_GI_number: 16124066 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Yersinia pestis # 1 815 1 815 815 1402 83.0 0 MTSPFSYTSPVVSVEALKHSIAYKLMFVVGKDPSIATQHDWLNATLFAVRDRIVERWLRS TRAQFSQDVRQVYYLSMEFLLGRTLSNALMAIGVYDEIKQALDEMGLDLEELIDEEIDPG LGNGGLGRLAACFLDSMATLALPARGYGIRYEYGMFKQNIVNGQQAESPDNWLEYGNAWE FVRHNTRYRVRFGGRIQQEGNRTRWLETEEVLALAFDQIIPGFDTDATNTLRLWSARASN EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILHR HWQTHHTLENLAEKIAIHLNDTHPVLSIPELMRLLIDDHKFEWEAAWVIIVQVFSYTNHT LMSEALETWPVDMLGKILPRHLQLIFQINDHFLKDVKEQYPDDDALLSRVSVIDETNGRR VRMAWLAVIASHKVNGVSELHSELMVQSLFADFARLFPNRFCNKTNGVTPRRWLALANQP LSKVLDENIGQRWRTDLSQLNELLPHIDYPTFIRDIQQAKLHNKKQLALYVAQKLNVVLD PNALFDVQIKRIHEYKRQLLNVLHVITHYNRILQEPEKDWTPRVKIFAGKAASAYYNAKQ IIHLINDVAKVINNDERIKGKLKVIFIPNYGVSLAQMIIPAADLSEQISTAGTEASGTSN MKFALNGALTIGTLDGANVEMLDHVGEENIFIFGNTTEQVEALRNNGYNPRQIYEQDPEL NQALTQIATGAFSPDDSRRYASLFDSLVNFGDHYQLLADYRSYIDTQDKVDELYKNRDEW TRRTVMNIANMGYFSSDRMIQEYADEIWNIKPVKL >gi|316917391|gb|ADCU01000024.1| GENE 102 136266 - 137108 248 280 aa, chain + ## HITS:1 COG:ECs0337 KEGG:ns NR:ns ## COG: ECs0337 COG2207 # Protein_GI_number: 15829591 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 4 277 16 293 296 103 28.0 4e-22 MDSKTCRNILYWVERNIYTGASIAQLVDVIGMSRRTLEVKFRQNYGISLGAYIFRRKMTR AAVTLKFSRLPITEIAIGLHYHSGQSFSRAFQRFFGKSPTAYRNDITWNTHILQFTFLYA LPDFRAEIIFWDEPRFITGNKINYKARTNIDDRSFIDNIRGYANEHLNNDADSIWVTTSI NDISCITTSRDDLVCVEATVGITVENEEECSMTIPKGQYAMFSFHGSWEDYYLFSKLIFI KSLAEHDLQWANNTSILNIHSLCNENHKIHCDMYIPILKI >gi|316917391|gb|ADCU01000024.1| GENE 103 137425 - 137712 214 95 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MENNHEEKHVNKRHAKLGKLIPGQVDIRLFRLLSMVCVMHSPSIRQSLEDVLVHGKNRRE ACESNGVAQSYFSVKYRHMQMVSHTVAQICNFTGE >gi|316917391|gb|ADCU01000024.1| GENE 104 137794 - 139281 1382 495 aa, chain - ## HITS:1 COG:YPO3937 KEGG:ns NR:ns ## COG: YPO3937 COG0578 # Protein_GI_number: 16124065 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Yersinia pestis # 32 491 1 460 473 809 83.0 0 METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAKDLACATSSASSKLIHGGLRYLEHYE FRLVSEALAEREVLLKLAPHIAFPMRFRLPHQPHLRPAWMIRTGLFLYDHLGKRTSLPSS KGLRFGPDSVLKSSLTRGFEYSDCWVDDARLVLLNAQEVVVRGGEVRTRTQVTRAYRENG LWVVEAKNADTGETLTWRAKGLVNATGPWVKHFFDDGLELKSPYGIRLIKGSHIVVPRVH NQPQAYILQNEDHRIVFVIPWMDEFSIIGTTDVEYHGDPHDVKIDDNEVNYLLKVYNDHF KKQLGKEDIVWTYSGVRPLCDDESDSPQAITRDYTLDVHDQDGKAPLLSVFGGKLTTYRK LAEHALEKLSGYYENCGPAWTKNAVLPGGDLGTDRDSYAAQLRRRFTWLPEALARRYART YGTRTEQLLGTAQSLEDLGEHFGHNLYEAELRYLIAEEWVVELDDAIWRRTKLGMWLDEG QKQRVAEWIREHRVN >gi|316917391|gb|ADCU01000024.1| GENE 105 139524 - 139922 363 132 aa, chain - ## HITS:1 COG:YPO0881 KEGG:ns NR:ns ## COG: YPO0881 COG1396 # Protein_GI_number: 16121188 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 1 131 2 132 132 146 56.0 8e-36 MICPECGSVNTVKEYRDMPYTYKGQTIIVKAVGADWCLNCGEGVVFTEESIRIDSIMGDF NKQVNASIIEPEFVIAMRKKLNLSQSEAGEIFGGGVNAFSRYETGKALPHVSTIKLLKLL DKHPELLAEIRD >gi|316917391|gb|ADCU01000024.1| GENE 106 139909 - 140097 122 62 aa, chain - ## HITS:1 COG:no KEGG:PputGB1_3777 NR:ns ## KEGG: PputGB1_3777 # Name: not_defined # Def: hypothetical protein # Organism: P.putida_GB1 # Pathway: not_defined # 1 57 42 98 98 70 56.0 1e-11 MYRIVSELSTQDFHKSMTTYENHRVWQDVYHCHLDKVSLYVKLTVIDEVLIVSFKELNDD MS >gi|316917391|gb|ADCU01000024.1| GENE 107 140470 - 141228 663 252 aa, chain - ## HITS:1 COG:YPO0120 KEGG:ns NR:ns ## COG: YPO0120 COG1349 # Protein_GI_number: 16120465 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Yersinia pestis # 1 252 1 252 252 463 91.0 1e-130 MKQTQRHDAIIDLVRQQGYVSTEELVEHFAVSPQTIRRDLNDLAEQNKIQRHHGGAALPS SSVNAAYHDRKIMWSDEKARIAQHVASLIPDGATLFIDIGTTPEAVAHALLNHRNLRVVT NNLNVATLLMGKEDFRLILAGGEVRTRDGGIMGEATLDFISQFRLDYGILGISGIDMDGS LLEFDYHEVRTKRAIIENSRCVILVTDHSKFGRNAMVNLGNMDLIDYLFTDEQPPASIQK IIEQHEVQLEIC >gi|316917391|gb|ADCU01000024.1| GENE 108 141262 - 142098 669 278 aa, chain - ## HITS:1 COG:YPO0121 KEGG:ns NR:ns ## COG: YPO0121 COG0705 # Protein_GI_number: 16120466 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Yersinia pestis # 1 275 1 275 278 348 62.0 5e-96 MVRIISLSNPRLAQAFIDYMATQGVRLELEVHNDEVVLWLADDSRQAQVEQELTRFLQEP LHPRYQAASWHSGSTHSGLKYSNFSYLKSFTRQTGPLTVGITAICVVVYLFMVVLGDAAV MNWLAWPVDSSQYLQVWRWVSHAFLHFSAVHIIFNLMWWWYLGGQVEKRLGAGKLLQIAL VSAFMSGWAQSLFSGSNFGGLSGVVYALMGYVWWCGERSPQMGVNMPRGLMVISVLWLVA GHFDWFGMSVANGAHIAGLVIGLLMAFWDTHHQRKNNA >gi|316917391|gb|ADCU01000024.1| GENE 109 142251 - 142580 374 109 aa, chain - ## HITS:1 COG:YPO0122 KEGG:ns NR:ns ## COG: YPO0122 COG0607 # Protein_GI_number: 16120467 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Yersinia pestis # 1 108 19 126 127 154 69.0 5e-38 MEQFVAISVEQAQQKLQQPDVVLVDIRDPQSYAAGHAAGAFHLTNATLQNFMQNNEFDTP VMVMCYHGNSSRGAAQYLLHQGFEEVYSIDGGFEAWVRAYPQQVETSSL >gi|316917391|gb|ADCU01000024.1| GENE 110 142854 - 143288 297 144 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNTRLRLLLPALLLSPMALQLLSTDANAQSAVMQQQQKMIQQQQQRFQNQSNTFNQQQLR NTQTQIQRDNQAQQLHQLNENMRLNADQQWQNNNQQRMLNNQNRQQRQQQLQLNQMDQQK KANNQRMLNQQNTVDQNKKNNGGY >gi|316917391|gb|ADCU01000024.1| GENE 111 144122 - 144865 597 247 aa, chain - ## HITS:1 COG:YPO3792 KEGG:ns NR:ns ## COG: YPO3792 COG0584 # Protein_GI_number: 16123926 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Yersinia pestis # 1 246 1 246 249 368 74.0 1e-102 MTIKWPYPKIVAHRGGGKLAPENTLAAIDIGAEYGHKMIEFDAKLSADGEIFLLHDDNLE RTTNGWGVAGDLPWEKLVSLDAGGWYGREFRDEPLPLLSQVADRCLELGLSANIEIKPTT GVESETGRVIALAAKNLWSTHPIAPLLSSFSVESLEAAQQAVPELPRGLLLEKWDGEWLA MTTRLGCVSLHIDHNELTAERVSDIKAAGLRILVYTVNSPKRARELLDWGVDCICTDRID VIGADFG >gi|316917391|gb|ADCU01000024.1| GENE 112 144900 - 145976 1007 358 aa, chain - ## HITS:1 COG:YPO3793 KEGG:ns NR:ns ## COG: YPO3793 COG3839 # Protein_GI_number: 16123927 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Yersinia pestis # 1 358 1 357 357 517 73.0 1e-146 MARLKLQTVSKSYDGKNAIIKGIDLDVADGEFIVMVGPSGCGKSTLLRMVAGLEETTSGD IYIGDDRVTHKEPKDRGVAMVFQNYALYPHMSVFDNMAYGLKIRGLGKELIRAKVEEVAA ILELQTLLNRKPSELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLELQQL HRRLKTTSLYVTHDQVEAMTLAQRVIVLNKGVAEQIGTPTEIYHRPASRFVAGFMGAPAM NLLDGCISTDGLFFQINDGPQLRFEQPISALAGQTLTLGIRPEHLRRAAEHESGSEFMVN QLELLGADNLAHSRWGDHGVILRLPHQDLPELGCSLQVVLPHENLHFFDITTGLRIEP >gi|316917391|gb|ADCU01000024.1| GENE 113 145981 - 146826 705 281 aa, chain - ## HITS:1 COG:YPO3794 KEGG:ns NR:ns ## COG: YPO3794 COG0395 # Protein_GI_number: 16123928 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Yersinia pestis # 1 281 1 281 281 409 79.0 1e-114 MIENRKGLDMFCHIMLILGVIVILFPLYVAFVAATLDKQQVFDVPMTLIPGSQLWHNITQ VWQQGVGSAGAPFGIQLMNSFIMALVITVGKIAVSMLSAFAIVYFRFPLRNLFFWLIFIT LMLPVEVRIFPTVEVMANLNLMDSYTGLTLPLMASATATFLFRQFFMTLPHELLEAARID GAGPMRFFRDVVFPLSKTNLAALFVITFIYGWNQYLWPLLITSDPAMGTAVAGIKSAISS GESATQWQLVMAALLMTLLPPLLVVLGMQRWFVRGLVDSEK >gi|316917391|gb|ADCU01000024.1| GENE 114 146823 - 147710 559 295 aa, chain - ## HITS:1 COG:YPO3795 KEGG:ns NR:ns ## COG: YPO3795 COG1175 # Protein_GI_number: 16123929 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Yersinia pestis # 1 295 1 295 295 411 80.0 1e-115 MSSRTPAFKRSWLPYALVAPQLLITAIFFLWPAGEALWYSVQSLDPFGLSSEFVGWQNFI TLWHDPYYLSAFRTTLWFSGLVTFFGLVLSLFFAALVNHILRGRRFYQTLFILPYAVAPT IAAVLWMFLFNPGLGLVSHFLGVMGYSWNHAQNSGQAMFLVVLASVWKQVSYNFLFFLAA LQSVPKSLLEAAAIDGAGPIRRFFHIVLPLISPVSFFLLVVNLVYAFFDTFPVIDAATGG GPGQSTTTLIYKIYREGFAGLDLSSSAAQSVVLMLIVVALTMIQFRYVERKVRYQ >gi|316917391|gb|ADCU01000024.1| GENE 115 147791 - 149113 1292 440 aa, chain - ## HITS:1 COG:YPO3796 KEGG:ns NR:ns ## COG: YPO3796 COG1653 # Protein_GI_number: 16123930 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Yersinia pestis # 1 440 1 439 439 704 78.0 0 MMNMTIKRSMCSLAVIFCFSAPALAVTEIPFWHSMEAELGTEVDSLAQRFNQSQDEYKIV PVYKGDYEQSLAAGIAAFRAGKAPAILQVYEVGTATMMQAKQAVKPVYQVFKEAGIPFDE SQFVPTVAGYYADNATGQLLSQPFNSSTPVLYYNKDAFKKAGLNPDEPPKTWQELATDAA KLRASGMSCGYASGWQGWVQLENFSAWNGVPFATENNGFGGPSARLEFNQPLQVKHIQLL SDMLKKGDFSYFGRKDEPTAKFYNGDCGMMTGSSGSLANIKQYAKFNYGVAFMPYDADAK NAPQNAIIGGASLWVMNGKKPETYKGVAEFFQFLAKPEIAAEWHQKTGYLPITTAAYELT KQQGFYDKNPGADVATRQMLNKPPLAFTKGVRLGNMPQIRTVVDEELEGVWTGKKTPQQA LDEAVSRGNQLLERFEKSAK >gi|316917391|gb|ADCU01000024.1| GENE 116 149031 - 149195 56 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSWYIPKIRRSLSLNVYGDNTHLTGIWHDEYDNKAQHVQFSSDILLQCTCISGD >gi|316917391|gb|ADCU01000024.1| GENE 117 149389 - 150090 261 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 223 1 229 245 105 28 2e-21 MLTLENVSAHYGKIQALHNVSIHIQQGEIVTLIGANGAGKTTLLGTLCGEPRATAGRIHF LGQDITDWQTARIMREAIAIVPEGRRVFSRMTVEENLAMGGFFADRHQYQERIARVYDLF PRLHERRIQRAGTMSGGEQQMLAIGRALMSQPKLLLLDEPSLGLAPIIILQIFDTIQQLR EEGMTIFLVEQNANQALKLADRGYVLENGHVVLEDSGAALLANSAVRSAYLGG >gi|316917391|gb|ADCU01000024.1| GENE 118 150142 - 150912 290 256 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 6 246 1 230 245 116 27 9e-25 MSTQPLLLVNNLCMRFGGLLAVNNVALILNQGEIVSLIGPNGAGKTTVFNCLTGFYRPTS GSIKLRDRELAGLAGQQIARMGVVRTFQHVRLFKEMTVVENLLVAQHQHLKSGVFAGLLK TPKFRRAEADALERAAVWLERVGLLEFANRQAGNLAYGQQRRLEIARCMVTRPELLMLDE PAAGLNPKETDELNELIADLRRHHQVSVLLIEHDMKLVMDISDRIYVVNQGTPLAQGSPE EVRNNPDVIRAYLGEA >gi|316917391|gb|ADCU01000024.1| GENE 119 150909 - 152180 1230 423 aa, chain - ## HITS:1 COG:YPO3806 KEGG:ns NR:ns ## COG: YPO3806 COG4177 # Protein_GI_number: 16123940 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Yersinia pestis # 1 415 1 415 428 646 86.0 0 MKQLNLVNAIISTITMFVLASFIMGVQLGLDGTHLVVNMADSIRWEWIAAGCVVVFFFQL MRPLIQQGLKKVSGPTLVLPSLDGSTPKQKLVLMLILIAAVVWPFVVSRGTVDIATLTLI YVMLGLGLNVVVGLSGLLVLGYGGFYAIGAYTYALLNHYYGIGFWESLPIAGIVAAAFGL LLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTFFGLEFNRSVR DGGWGSFHEFFGLKYDPSDRIIFLYLVALLLVVITLFVINRLLRMPLGRAWEALREDEIA CRSLGLSPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFVESAFVLAIVVLGGMG SQFAVILAAVILVVSRELMRDLNEYSMLLLGALMVLMMIWRPQGLLPMKRPQLKFATRKG GQV >gi|316917391|gb|ADCU01000024.1| GENE 120 152177 - 153103 1006 308 aa, chain - ## HITS:1 COG:YPO3807 KEGG:ns NR:ns ## COG: YPO3807 COG0559 # Protein_GI_number: 16123941 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Yersinia pestis # 1 308 1 308 308 471 93.0 1e-133 MSEQFLYFIQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAA LMMLGIDASWLLIGAAFIVAIVITSAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQN YVSLTQGSRDLALPRLVTGQWTLGESNGFSASISTMQIIIWVVTFLAMLALTLFIRYSRM GRACRACAEDLKMASLLGISTDRVISLTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGM KAFTAAVLGGIGSIPGAMIGGLILGVAEALTSAYLSTEYKDVVSFALLIVVLLVMPTGIL GRPEVEKV >gi|316917391|gb|ADCU01000024.1| GENE 121 153136 - 153408 69 90 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMLQRCSNPARQNLGVRFRPPIYRAFIDNLGVWAKTAREWSPHSHALFEMPFSLWANMRH VWHFRPSRRHSVGVAYSTKASTKIRTVRTI >gi|316917391|gb|ADCU01000024.1| GENE 122 153401 - 154513 1286 370 aa, chain - ## HITS:1 COG:YPO3808 KEGG:ns NR:ns ## COG: YPO3808 COG0683 # Protein_GI_number: 16123942 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Yersinia pestis # 1 370 1 371 371 634 85.0 0 MSINKGKVFLTGCIALAMSSSVMAKDIKVAIVGAMSGPVAQYGDMEFTGAKQAIADINAK GGVNGDKLVGVEYDDACDPKQAVAVANKVINDGIRYVIGHLCSSSTQPASDIYEDEGVLM ITPAATNADLTTRGYKLIMRTTGLDSDQGPTAAKYILNTIKPQRIAVVHDKQQYGEGLAR SVKDALEKSNVKPVLFEGITAGDKDFSTLVAKLKKDNVDFVYFGGYYPEMGQILRQAKQA GLKAKFMGPEGVGNSSLSNIAGDASEGMLVTLPQRYDQVPANKAIVDSLKAKKLDPTGPF VWTTYAALQSLTTGMERSKSEEPADIIKNLKSQPVDTVMGPLSWDDKGDLKGFEFGIFEW HADGSSTSVK >gi|316917391|gb|ADCU01000024.1| GENE 123 154931 - 155344 354 137 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_3698 NR:ns ## KEGG: NT01EI_3698 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 1 124 1 122 130 159 65.0 3e-38 MKLTIERLMALNPDDIRDLGKVWPEQQPEIWQAWLDDGHALFAARFNDRLLGAVKVCADR QKGFATLHDLCVREVTRRRGVGLYLVEDTMRQLPEINVWQLAASEVPGVGLEEMNAFMAA CGFNFCELNSGEQGWQN >gi|316917391|gb|ADCU01000024.1| GENE 124 155348 - 156484 1228 378 aa, chain - ## HITS:1 COG:YPO3980 KEGG:ns NR:ns ## COG: YPO3980 COG1929 # Protein_GI_number: 16124107 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Yersinia pestis # 1 377 1 377 378 587 88.0 1e-167 MKIVIAPDSFKESLSAMQVAEAIEQGFSEIFPQAEYIKLPMADGGEGTVESMVAATGGER VHVNVTGPLGLPVNGFFGWMGDGETAVIEMAAASGLHLVAPEQRNPLVTTSFGTGELILA ALNHGARKIILGIGGSATNDGGAGMMQALGAHFHDIDGKELHVGGAALAQLASVDLSQLD ARLAQTDILVACDVDNPLCGAKGASAVFGPQKGATPERVKLLDAALQHYGEKIELATGKS VLNVAGAGAAGGMGAALFGLLNARLQPGIEIVTEALKLADAVQGADLVITGEGRIDSQTI HGKTPVGVARVAKRYDIPVIAIAGGMTPDYSVVHQHGLDAVFSVLNRIQTLPEALEGARE NVRVTARNVAAVWKMGRG >gi|316917391|gb|ADCU01000024.1| GENE 125 156495 - 157763 1256 422 aa, chain - ## HITS:1 COG:YPO3979 KEGG:ns NR:ns ## COG: YPO3979 COG2610 # Protein_GI_number: 16124106 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Yersinia pestis # 1 422 1 422 422 545 95.0 1e-155 MTTVSALGAIVALVVSIVLILRKVPPAYGMIAGALAGGLVGGADLIQTISLMITGAQGIT NAVLRILGAGILAGVLIESGAANTIAETIVRKVGEKRALLALAVATMLLTAVGVFIDVAV ITVSPIALAIAHRADISKMAILLAMIGGGKAGNVMSPNPNTIAAADSFHVPLTSLMVAGI IPGLFGLVLAYFLAKRLKHRGSKVEAHELVVGKHDAALPAFGAAIAAPLVAIILLALRPI AGIAIDPLVALPVGGLIGAVVMGQWKHTNQYMVSGLSRMAPVAIMLLGTGTLAGIIANSG LKDVLITGLTASGMPSYLLAPISGALMSMATASTTAGTAVASAVFSSTLIGMGISALAGA AMIHAGATVLDHMPHGSFFHATGGSVNMQVHERLKLLPYETAVGLMIAFVSTMMFGVFNL AG >gi|316917391|gb|ADCU01000024.1| GENE 126 157918 - 159045 714 375 aa, chain - ## HITS:1 COG:YPO3978 KEGG:ns NR:ns ## COG: YPO3978 COG3835 # Protein_GI_number: 16124105 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sugar diacid utilization regulator # Organism: Yersinia pestis # 1 375 1 375 375 568 80.0 1e-162 MPNSYLKEDTARQIVSRAMSIIDYSVNVMNEHGVIIASGDPSRLHQRHEGAVLALTENRM VIIDDAVASRLKGVKPGINLPIIFRQRMVGVIGISGEPEKVQAYAELVRMAAELILEQAE MLEQNQWEKRYREQLASQLIMERGSVASMASMAAYLGLDLSLPRIALIVSLHEQEHIRQR ELLETLSNHNHETLVMMHGFDRIVVLLPLNISRSDDNDAAIKKGLRKLHVQLQSRFHVNI YVGGLFAGDDGVRRSYLSAQALQEMAQRQKLNQAVLYYRDHFLPVLLNGFADSWQAEELG LAWQALRQADAKGVLCHTLRCYFVQNCDLSQTSKQLHIHVNTLRYRLQKIEDITSLKINE LNSILQLYIGMQIYR >gi|316917391|gb|ADCU01000024.1| GENE 127 159180 - 160031 1074 283 aa, chain - ## HITS:1 COG:YPO3811 KEGG:ns NR:ns ## COG: YPO3811 COG0568 # Protein_GI_number: 16123945 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Yersinia pestis # 1 283 1 285 285 453 87.0 1e-127 MTKEMQTLTLVPQGSLEAYVRAANTYPMLTAEEEKELGERLHYEGDLDAAKQLILSHLRF VVHVARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEMGVRLVSFAVHWIKAEIHEYVLRN WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVSEKDVLEMESRMAAQDM AFDMSNDDDESSPAAPVLFLQDKSSDFANDIEDDNWDSHAADKLTLAMEGLDERSQHIIR ARWLDDDNKATLQELADQYGVSAERVRQLEKNAMKKLRAAIEA >gi|316917391|gb|ADCU01000024.1| GENE 128 160309 - 161286 1087 325 aa, chain - ## HITS:1 COG:YPO3812 KEGG:ns NR:ns ## COG: YPO3812 COG2177 # Protein_GI_number: 16123946 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Yersinia pestis # 17 325 9 317 317 521 84.0 1e-148 MAKAPNRSATRAKTPDKAKALRGGWREQWRYAWINTLADMMRQPLATLLTVMVIAISLTL PSVCYLVYKNVSEAAAQWYPTPQLTVYLDKALDDDAAEQVMTVLKGEEGVDKVNYLSREE ALGEFRNWSGFGGALDMLEENPLPAVAIITPKMNFESSETLNTLRDRVAAVKGVDEVRMD DSWFARLAALTGLVGQVAAMIGILMIVAVFLVIGNSVRLSIFSRRDTINVMKLIGATDGF ILRPFLNGGALLGFCGAILSLILSQAMVWQLGSAVAKVASVFGTTFVLHGLGWDECLLLV LVSAMIGWIAAWLATVQHLRRFTPQ >gi|316917391|gb|ADCU01000024.1| GENE 129 161279 - 161947 338 222 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 213 4 217 223 134 36 2e-30 MIRFEQVSKAYLGGRQALQGVDFHLRQGEMAFLTGHSGAGKSTLLKLICGIERPSAGHIL FGGHDISRLRNSEVPFLRRQIGMIFQDHHLLMDRTVYDNVSMPLIISGASSEDIRRRVSA ALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDEALSEGILRLF EEFNRVGVTVLMATHDMGLIARRRYRMLTLSQGRMDGGISHG >gi|316917391|gb|ADCU01000024.1| GENE 130 161953 - 163764 750 603 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 304 600 21 321 336 293 48 4e-78 MAKDKKRGFFSWLGFGRQEEQPEKAQEDIQQTPPEAEETKQHQADASSEHKTAPEQLDDK LPERESDHADSVETPGEWDASVAPEHAAENLPHAEPHVPHETSSKVLADELVKTTEHLAT SHEHRADAQDAEVFAEQVVELTRAHHEEPEIVEEVPEPQRTPTSAEVTAENIIHASEPLE SHHEAHHGGEHLEHDAEVFAEQVITLTEAAHPHVHQEPVIDEPYIEELVEQEIAEDDVIK PEPTIVEPEPESIDVIAEIARSEEVVDLDTDDVEEPNVEDTQADARPVVQHEQERPTKEG FFARLKRSLLKTKQNLGSGFFGLFRGKKIDDDLFEELEEQLLIADVGVETTSKIIKSLTE HASRKELKDAESLYGKLKEEMGEILSTVDKPLDVSGRTPFVILMVGVNGVGKTTTIGKLA RQFQAEGKSVMLAAGDTFRAAAVEQLQVWGERNNIPVIAQHTGADSASVIFDAIQAAKAR NVDVLLADTAGRLQNKAHLMEELKKIVRVMKKLDEDAPHEVMLTIDASTGQNAVSQAKLF NEAVGLTGITLTKLDGTAKGGVIFAVADQFGIPIRYIGVGEGIEDLRPFKADDFIEALFA RED >gi|316917391|gb|ADCU01000024.1| GENE 131 163975 - 164556 386 193 aa, chain + ## HITS:1 COG:YPO3816 KEGG:ns NR:ns ## COG: YPO3816 COG0742 # Protein_GI_number: 16123950 # Func_class: L Replication, recombination and repair # Function: N6-adenine-specific methylase # Organism: Yersinia pestis # 1 190 11 200 220 287 73.0 9e-78 MAKKPASQSSGQIRIIGGLWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVINDARCLDC FSGSGALGFEAVSRYAAHATLLEADRMVAAQLKKNVALINTDKVTVQNTDALKWLSQPGT PYQVVFLDPPFRKGLLAETITLLENNGWLAEDASIYVEAEVESAAADVPANWTLHREKVA GQVAYRLYLRSAP >gi|316917391|gb|ADCU01000024.1| GENE 132 164572 - 164844 335 90 aa, chain + ## HITS:1 COG:yhhL KEGG:ns NR:ns ## COG: yhhL COG3776 # Protein_GI_number: 16131338 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 84 1 84 89 114 71.0 5e-26 MGINIGRLLMLCVWGFMLVNIVHPYTRPLNIFMNVALVFMVLMHGLQVTMLKTTLTKDQP KISKWQEVRIFLFGVFELLAWQKKNTPPKK >gi|316917391|gb|ADCU01000024.1| GENE 133 164884 - 165243 356 119 aa, chain - ## HITS:1 COG:no KEGG:PANA_3728 NR:ns ## KEGG: PANA_3728 # Name: yhhM # Def: YhhM # Organism: P.ananatis # Pathway: not_defined # 3 114 2 113 118 114 54.0 1e-24 MSKPPLIFVVIVAVIVVFAAQRFMQQRRQNAINDAAPINTQQVEVSAKREFPAPNRRSRQ REVIAGEDMRYEVYFKPLIGGSELKFIVPETTYHQIDKGAVGKLSTQGTRFVGFEADVK >gi|316917391|gb|ADCU01000024.1| GENE 134 165240 - 165560 319 106 aa, chain - ## HITS:1 COG:YPO3818 KEGG:ns NR:ns ## COG: YPO3818 COG4517 # Protein_GI_number: 16123953 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 106 1 106 106 166 76.0 9e-42 MSGQQPLYRIQFMNNGKNYQLYVRELVQSNLFGFIEIADFVFDTQSAVLVDPSEEKLKSE FSGVSRSFIPVQAVIRIDAVTERGSARISDLGDNVTTFPYLPGKKP >gi|316917391|gb|ADCU01000024.1| GENE 135 165843 - 166469 649 208 aa, chain + ## HITS:1 COG:STM3575 KEGG:ns NR:ns ## COG: STM3575 COG3714 # Protein_GI_number: 16766861 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 208 1 208 208 210 64.0 1e-54 MSWAFLAVFFSGWLFVDASYRGPCWQRWVFKPVTLLLLLLLAWSAPNIQANGYLILLGLL ATLAADALLLLPRERVLYAIGAFFLSHLLYTISFASALTVSFYLPMLAVLIIIGLVLTAT IWTRLEDMRWPVVTYIAMTLLMVWMAGDQYFARGTDFGFSLLVGASLLLLSNVVWLINRY RFSFRAADAIIAASYFGGHFLIVRSLYL >gi|316917391|gb|ADCU01000024.1| GENE 136 166667 - 167998 1085 443 aa, chain - ## HITS:1 COG:ECs3245 KEGG:ns NR:ns ## COG: ECs3245 COG3048 # Protein_GI_number: 15832499 # Func_class: E Amino acid transport and metabolism # Function: D-serine dehydratase # Organism: Escherichia coli O157:H7 # 1 442 1 442 442 674 76.0 0 MNTFEIENLVEQYPLVKQLINLDEVTWFNPKTTTLAEGLPYVGLTQDDVAQAEARLKRFA PYLCLAFPETQKTQGIIESDVVAIPAMQQALEQRYQQKIAGQLMLKKDSHLPISGSIKAR GGIYEVLTHAEKLAIEAGMLSETDDYSVLYSDKFRQFFSQYSIAVGSTGNLGMSIGIMSA KLGFSVSVHMSADARAWKKQKLRDHGVNVVEYAQDYGVAVAQGRKEAESDPRCFFIDDEN SRTLFLGYAVAGGRLRQQFTEMDIRVDAEHPLFVYLPCGVGGGPGGVAFGLKLAFGDHVH CFFAEPTHSPCMLLGIHTGLHDEISVQDIGIDNITAADGLAVGRASGFVGRAMERLLDGF YTLSDQEMYNLLGILNQQQGIQLEPSALAGMPGAVRVCGSTEYLNAHALDKQKMQNATHL VWATGGGMVPTEEMAKYLAAAKI >gi|316917391|gb|ADCU01000024.1| GENE 137 168011 - 169348 1208 445 aa, chain - ## HITS:1 COG:dsdX KEGG:ns NR:ns ## COG: dsdX COG2610 # Protein_GI_number: 16130297 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli K12 # 1 445 1 445 445 629 84.0 1e-180 MDSQIWVVGTLLTSIIIIILTIVKFKIHPFLALLLASFYVGVLMGMNPLEMVNAIEGGIG GTLGFLAAVIGLGTILGKMMEVSGAAERIGITLQKCRWLSPDVIMVLVGLVCGITLFVEV GVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVTNALGADIGTVIV YGLFVGLVASLIGGPLFLKFLGHRLPFKQVPAAFSELEVRKEEDLPSLGATLFTVLLPIV LMLIKTAAELNMAKGSALYNFFEFIGNPITAMFIAAFVAYYVLGIRQHMSMSKLLSKTED GFSSIANILLIIGAGGAFNGILKASGLADTLAVLLSNMHMHPILLAWLVAIILHAAVGSA TVAMMGATAIVAPVLPLYPDVSPEVITLAIGSGAIGCTIVTDSLFWLVKQYCGATLSETF KYYTVATFIASLIALATTFLLSYIV >gi|316917391|gb|ADCU01000024.1| GENE 138 169572 - 170519 713 315 aa, chain + ## HITS:1 COG:STM3800 KEGG:ns NR:ns ## COG: STM3800 COG0583 # Protein_GI_number: 16767086 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 9 307 7 304 307 436 69.0 1e-122 MNIGQKYITRNKLLNGYQLSKLYTFEVAARHESFALAAEELSISPSAVSHRINQLEEELG FKLFQRFHRRIALTPDGERVFWALKSSLSYLNQEILEIKSQELSGTLTVYSRPSIAQCWL VPKLADFAQKYPAISLNILTGNEMVNFSGAGIDLAIYFDDKPPEKLACQHLMNESMVPVC SPEYAERHDLVGKPFNLRQCTLLHDRQAWSYDSDQSEWHSWAQHFKVDIAEDQRSMGFDR SDLAVIAAMNHVGIAMGRKKLVNKRLATKELITPFPEFEMQCEQRYYISTLSERQWPKIN AFIQWLKIMAEANEG >gi|316917391|gb|ADCU01000024.1| GENE 139 170516 - 171187 478 223 aa, chain - ## HITS:1 COG:STM4056 KEGG:ns NR:ns ## COG: STM4056 COG2258 # Protein_GI_number: 16767322 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 222 22 244 250 313 64.0 2e-85 MHYPTIYVGTIVPYEGSKPSAIGKRQITGGVMLHRLGLDGDEQAEKKVHGGPDRALCHYP REHYHFWRQQYPQQAEQFCAPALGENISTEGMTEENVFIGDIYRWGDAFIQVTQPRSPCY KLNYHMDIEEFSVQMQETGRCGWLYRIVGEGGVSEDQPLELVSRNSGISVAEAISICFHM PFDEEEYRRLMCAAGISASWSKTLQMRVLSGKIEDMNRRLLGA >gi|316917391|gb|ADCU01000024.1| GENE 140 171315 - 171941 593 208 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 207 1 201 201 233 54 6e-60 MSYTLPSLPYAYDALEPHFDKQTMEIHHSKHHQAYVNNANAALESLPELAKLTAEELIAQ LDKVPTEKRTALRNNAGGHANHSFFWKGLKLGTELKGDLKAAIERDFGSVDKFKEEFEKA AATRFGSGWAWLVLKDDGKLAVVSTANQDSPLMGEAVSGASGYPIAGLDVWEHAYYLKYQ NRRPDYIKAFWSVVNWDEAAKRFAEAKK >gi|316917391|gb|ADCU01000024.1| GENE 141 172511 - 173404 341 297 aa, chain + ## HITS:1 COG:RSc2523 KEGG:ns NR:ns ## COG: RSc2523 COG4714 # Protein_GI_number: 17547242 # Func_class: S Function unknown # Function: Uncharacterized membrane-anchored protein conserved in bacteria # Organism: Ralstonia solanacearum # 56 293 66 294 303 126 34.0 4e-29 MAHILSRKYSKALTKIALIIGLLSTCAHAELTSNLKNLERKLHYQQGAINLLNGSITINT GDKFRYLSPQDSEKVLVDGWGNPPSGELGLGMLVPVDLSPLEERGWGAEITFEDDAYISD DDAKTIDYDKVLKDMQQQTSVGNIERQHQGYDPIYLLGWAEAPHYDQSSHIIYWAQRLSL NPTASDEAVNYYIRNLGRKGVLNINIIADKKDLPAVKKSAPDLLKVASFTEGNRYEDHHF WDTTSSYSLAALVAGGAAVTAKKAGLIGLIIIFLKKFFVVILAAVAGLWKAISGKKK >gi|316917391|gb|ADCU01000024.1| GENE 142 173580 - 174386 545 268 aa, chain - ## HITS:1 COG:YPO4060 KEGG:ns NR:ns ## COG: YPO4060 COG1526 # Protein_GI_number: 16124174 # Func_class: C Energy production and conversion # Function: Uncharacterized protein required for formate dehydrogenase activity # Organism: Yersinia pestis # 9 268 15 274 274 416 75.0 1e-116 MSFLNNNPVNGVRQTMVQQRGQLHTSQSDWVAEEVPVALVYNGISHVVMMASPKDFEAFA LGFSLSEGIIRTPQDIYGMDVVPACNGVEVQIELSSRCFMSLKERRRSMAGRTGCGVCGV EQITDVVRPLEPLPFTQTFDLENLDNALRQLRSVQHIGDLTGCTHAAAWIDPLGELQGGC EDIGRHVALDKLLGIRAKQPWTQGAVLVSSRASYEMVQKAAMCGVEILFAVSAATTLAID VADKCNLTLVGFSKPGRGTVFTHPQRLR >gi|316917391|gb|ADCU01000024.1| GENE 143 174680 - 175267 372 195 aa, chain + ## HITS:1 COG:ECs4820 KEGG:ns NR:ns ## COG: ECs4820 COG0243 # Protein_GI_number: 15834074 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 195 1 195 1016 388 92.0 1e-108 MQVSRRQFFKICAGGMAGTTAAALGFAPAVALAETRQYKLLRARETRNTCTYCSVGCGLL MYSLGDGAKNAKESIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKYPEYRAPGSDK WQRLTWDDAFDRIAKLMKEDRDANFIPTNEQGTTVNRWLSTGMLCASASSNETGYLTQKF SRALGMLAVDNQARV >gi|316917391|gb|ADCU01000024.1| GENE 144 175316 - 177730 2063 804 aa, chain + ## HITS:1 COG:STM4037 KEGG:ns NR:ns ## COG: STM4037 COG0243 # Protein_GI_number: 16767302 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 804 213 1016 1016 1498 87.0 0 MTNHWVDIKNANLIVVMGGNAAEAHPVGFRWAMEAKIHNKAKLIVIDPRFTRTASVADFY TPIRSGTDIAFLSGVLLYLISNNKINAEYVKNYTNASLLVREDYAFDDGLFSGYNEEKRT YDKTTWNYQLDENGFAKRDDTLQDPRCVWNMLREHVSRYTPEVVENICGTPKADFLTVCE YIAETSAVDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSTSLPGYLNLPSEKQTDLETYLAATTPKPTLPGQVNYWGNTPKFFVSLMKSF YGDKAQKENNWGFDWLPKWDKGYDVLQYFEMMSQGKVNGYLCQGFNPVASFPNKNKVVKS LSKLKFLVTIDPLNTETSTFWQNHDEFNDVDPSQIQTEVFRLPSTCFAEENGSIVNSGRW LQWHWKGADAPGEALNDGEILAGIFLRLREMYAKEGGALPEQVLNMTWDYLTPENPAPEE VARENNGKALADLVDPTTGAVLVKKGQQLSSFAQLRDDGTTSSGCWIFAGSWTPEGNQMA RRDNSDPSGLGNTLGWAWAWPLNRRILYNRASADPSGKPWDPKRQLLEWDGAKWSGIDIP DYSTAAPNSGVGPFIMQPEGMGRLFAIDKMAEGPFPEHYEPFETPLGTNPLHPNVVSNPA ARVFKDDLAAMGKADKFPYVGTTYRLTEHFHYWTKHALLNAILQPEQFVEIGEKLAEKKG IKHGDTVKVSSNRGYIKAKAVVTKRIRTLKVDGKDIDTIGIPIHWGYQGVAKKGFIANTL TPFVGDANTQTPEFKAFLVNVEKV >gi|316917391|gb|ADCU01000024.1| GENE 145 177743 - 178681 663 312 aa, chain + ## HITS:1 COG:YPO4057 KEGG:ns NR:ns ## COG: YPO4057 COG0437 # Protein_GI_number: 16124173 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Yersinia pestis # 1 284 1 286 323 555 91.0 1e-158 MAYQSQDIIRRSATNSLTPPPEARNHQEEVAKLIDVTTCIGCKACQVGCSEWNDIRDEVG HNVGVYDNPADLTAKSWTVMRFSEVEENGKLEWLIRKDGCMHCADPGCLKACPSEGAIIQ YANGIVDFQSEHCIGCGYCIAGCPFDVPRMNKEDNRVYKCTLCVDRVAVGQEPACVKTCP TGAIHFGTKEAMKELAAGRINELHTRGFANAGLYDPAGVGGTHVMYVLHHADKPELYHGL PKDPTISPTVQFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRVHDEEEGEIDGKVDDIK PEVDQHEKEERK >gi|316917391|gb|ADCU01000024.1| GENE 146 178678 - 179310 621 210 aa, chain + ## HITS:1 COG:YPO4056 KEGG:ns NR:ns ## COG: YPO4056 COG2864 # Protein_GI_number: 16124172 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Yersinia pestis # 1 209 1 209 224 340 85.0 9e-94 MRKEKPIQRYSAPERINHWIVAFCFIVVSISGLGFFFPSFNWLMYIMGTPQLARILHPFF GVVMFASFLIMFFRYWKHNLINREDITWAKNIHKIAMNEEVGDTGRYNFGQKCVFWAAIG SLILLLASGVVIWRPYFADAFSIPVIRVALMVHSFAAVLLIVVIMVHIYAALWVKGTITA MVEGWVPAAWAKKHHPRWYREVRAKEQERK >gi|316917391|gb|ADCU01000024.1| GENE 147 179545 - 180474 881 309 aa, chain + ## HITS:1 COG:YPO4055 KEGG:ns NR:ns ## COG: YPO4055 COG3058 # Protein_GI_number: 16124171 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in formate dehydrogenase formation # Organism: Yersinia pestis # 1 309 1 309 309 491 74.0 1e-138 MSIKIVPKEQLGAEREKTGGLDNIPPVLFANLKSLYSRRAERLRQLAENNPLGDYLNFAA AIAEAQQKALHDNPLTLDLTQTLTNAAALGKPPLDTSIFPRSHHWHTLLQALIAELMPDA PEHIQPVLENLAKTSDSELEIMAKDLFAGNFGVVGSDKAPFIWAALSLYWAQMATQMPGK AKAEYGENRQYCPVCGSMPVASVIHMGTTNGLRYLHCNLCESEWHVVRVKCTNCEQTRDL NYWSLDSENAAVKAESCGDCGTYLKMVYQEKDPKVEPVADDLATLVLDAKMEEEGFGRSS INPFLFPGE >gi|316917391|gb|ADCU01000024.1| GENE 148 180763 - 181515 605 250 aa, chain + ## HITS:1 COG:no KEGG:Spro_0060 NR:ns ## KEGG: Spro_0060 # Name: not_defined # Def: xylose isomerase domain-containing protein # Organism: S.proteamaculans # Pathway: not_defined # 1 249 1 249 250 308 63.0 1e-82 MKREIVVVTAAYGWDKVNELGGQANLLPIIAESGANGVEIRRELLSQAELQTLGDLTKQI ARHQLFAVYSVPEGLFTPDGLLNPALEQRLHEAIELNARLVKFSLGHYQPGYDFTALNAL LKKYDVPLVVENDQTADCGTLSPLNAFFAAVQDCHSPIRMTFDMANWDWVNEDAEIAAQK LAHMVHYVHVKAAEKRVQGWCAVELDNSDGRWKPLLSQLPNQVMRGIEFPLEGDDLTAIT RHYVNLLRAN >gi|316917391|gb|ADCU01000024.1| GENE 149 181517 - 182458 844 313 aa, chain + ## HITS:1 COG:PA2261 KEGG:ns NR:ns ## COG: PA2261 COG0524 # Protein_GI_number: 15597457 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Pseudomonas aeruginosa # 4 311 2 307 316 333 56.0 2e-91 MKTSQLDVITYGEAMTMFVANETGELDQAMQFTKRIAGAELNVSIGLSRLGMNVGWVSRV GDDSFGHFTLATLEQEGIDHQCVIVDQRFPTGFQLKSKAENGTDPKVEYFRKGSAASHLS VHDFDRTYFSQARHLHLSGVAAALSTDSLELANHAAKEMRAMGKTISFDPNLRPVLWPSQ QVMCEKLNALAFQADWVLPGLKEGQILTGKQTPEDIADFYLSRGVKAVIIKLGPDGAWFK TADGHQQHVAAIRVENVIDTVGAGDGFAVGVISALLEGKALPEAVMRGNKIGALAVQAIG DSEGLLTRAQLGE >gi|316917391|gb|ADCU01000024.1| GENE 150 182529 - 183824 1072 431 aa, chain + ## HITS:1 COG:PA2262 KEGG:ns NR:ns ## COG: PA2262 COG0477 # Protein_GI_number: 15597458 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 1 412 1 412 435 551 70.0 1e-156 MSKSTIAPKRWWYIMPVIFITYSMAYLDRANFSFASAAGINEDLGITKGMASLLGALFFL GYFFFQIPGAIYAERRSVRKLVFWCLILWGMCATLTGLVSNIPALAAIRFALGVVEAAVM PAMLIYISNWFTKAERSRANTFLILGNPVTVLWMSVVSGYLIHAYGWREMFIFEGFPAVI WAFCWWVLVKDKPEQVGWLSESEKAALQAKLLEEQQGIKAVRNYGEAFRSRNVIILCAQY FAWSIGVYGFVLWLPSILRHGSDMGMVEAGWLSAVPYLAATIAMIVVSWASDKMQNRKLF VWPLLLIGALAFIGSYLVGANHFWWSYTLLVIAGAAMYAPYGPFFAIIPEMLPRNVSGGA MALINSMGALGSFFGSWFVGYLNGSTGSPAASYVFMAGALLVAVWLTLIVKPSDAQKKVA VKSAPAVSQGK >gi|316917391|gb|ADCU01000024.1| GENE 151 183828 - 184802 730 324 aa, chain + ## HITS:1 COG:YPO4078 KEGG:ns NR:ns ## COG: YPO4078 COG1052 # Protein_GI_number: 16124190 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Yersinia pestis # 1 323 1 323 326 419 65.0 1e-117 MKQSVVLYKKIPTDLQLRLEKHFDVRFFDGINNANRAEVIRALESADGMIGASVPVRTDL LDHAPKLKAISTISVGYDQFDVDDLTRRKIVLMHTPTVLTETTADTVFTLILMTARRALE MAEMVKAGKWTRSIGVDSYGVDVHHKTIGILGMGRIGSALARRAHAGFGMNVLYWNDRPN TQVEQEFNARRCELDELLAKSDFVCITLPYSEQTHKLINTERLAKMKPSAILINGARGKI VDQTALIKALKNGTIRAAGLDVFEVEPLPVDSELLQLPNVVALPHIGSATEETRYNMAAC AVDNLITALTGKVTENSVNAHLLT >gi|316917391|gb|ADCU01000024.1| GENE 152 184935 - 186308 1092 457 aa, chain - ## HITS:1 COG:ZhemN KEGG:ns NR:ns ## COG: ZhemN COG0635 # Protein_GI_number: 15804452 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Escherichia coli O157:H7 EDL933 # 1 457 3 459 459 764 79.0 0 MSEQAIVWDLALIQKYNYSGPRYTSYPTALEFSESFTEAEFAHAVARYPERALSLYVHIP FCHKLCYFCGCNKIVTRQTHKADEYLDKLALEISQRAPMFAGRKVSQLHWGGGTPTYLDK TQISRLMRMLRDAFDFLPDAEISIEVDPREIELDVLDHLRQEGFNRLSMGVQDFNKEVQK LVNREQDEQFIFDLINRAKAIGFTSTNIDLIYGLPKQTPESFSYTLQKVAELNPDRLSVF NYAHMPKLFAAQRKIKDEDLPSADSKLSILQETIAMLTDSGYQFIGMDHFAHANDELAIA QREGKLHRNFQGYTTQGDSDLLGLGVSAISMIGDSYAQNRKVLKEYYADVQDHGHALWRG ISMTEDDCLRRDVIKNLICNFRLDYSHVERQYGIVFADYFADDLKLLAPLVDDGLVDVTS TRIEVTPRGRLLIRNICMCFDIYLRKQARMQQFSRVI >gi|316917391|gb|ADCU01000024.1| GENE 153 186491 - 187030 536 179 aa, chain - ## HITS:1 COG:YPO0020 KEGG:ns NR:ns ## COG: YPO0020 COG3078 # Protein_GI_number: 16120373 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 179 1 188 188 137 60.0 1e-32 MSPANKTPKAKTSAPKQKRKTRVELDLEARARKRQKKHRGNKSGGRANPETANKKTTDSA KAIDPRIGSKVPVPLVATEVKKPKAKAPKPEVKKRLSPEEELTQLENDPRLDALLIRLDD GEELNKEEQTYVDNMLDRIDELMEELGIELGDEDDEVDEEEPKEDIVKLLKRGNPKDVF >gi|316917391|gb|ADCU01000024.1| GENE 154 187781 - 188431 663 216 aa, chain + ## HITS:1 COG:YPO0019 KEGG:ns NR:ns ## COG: YPO0019 COG0218 # Protein_GI_number: 16120372 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Yersinia pestis # 1 216 1 216 216 374 85.0 1e-104 MNRKTYNYHVTHFVTSAPDIRALPADIGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKT PGRTQLINLFEVTDGVRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRNCLKGLVVLMDI RHPLKDLDQQMIQWAVDVNLPVMLLLTKADKLASGARKAQLNMVREAVLPFMGDIQVETF SSLKKFGVDKLSEKLNTWFSEIEPETLSEEEEESGE >gi|316917391|gb|ADCU01000024.1| GENE 155 188738 - 191539 2832 933 aa, chain - ## HITS:1 COG:YPO0017_2 KEGG:ns NR:ns ## COG: YPO0017_2 COG0749 # Protein_GI_number: 16120370 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Yersinia pestis # 288 933 1 645 645 982 77.0 0 MAEIPENPLILVDGSSYLYRAYHAFPPLTNRAGEPTGAMYGVLNMLRSLMLQYQPSHVAV VFDAKGKTFRDELFAEYKSHRPPMPDDLREQIEPLHKMVQAVGLPLLAVSGVEADDVIGT LAQAAEKAGRHVLISTGDKDMAQLVTPNITLINTMNNTILGPQEVCDKYGVPPELIIDFL ALMGDSSDNIPGVPGVGEKTAQALLQGIGSLKQIYSDLDKVATLSFRGAKTMGAKLELNK DQADLSYLLATIKTDVELDVTCDDLKLKPMDTAQLHELFSRYEFKRWLEDAETGSWLSGE KKAPAARKSAKDDTETAVTAVEETTAILSQENYLTVLDDAALDSLIASLKAAKIFAFDTE TDSLDVLTTNLVGLSFATAPSVAAYIPVGHDYLDAPDQLDRDDVLAKLKPVLEDANLLKV GQNLKYDQGVMARYGIELQGIAFDTMLESYDLDSVAGRHDMDSLAERHLNHKTITFEEIA GKGKSQLTFNQIALEQATPYAAEDADVTLQLHLKLWPQLEKEAGLKKVFTDIDMPLVPVL SRMERTGVLIDSNILGKHSQELAIRLDELEKKAHEAAGEPFNLSSPKQLQAILFEKQKLP VVKKTPGGAPSTNEEVLAELSEQGFELPTIILEHRGLAKLKSTYTDKLPQMINPATGRVH TSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPQGYKIVAADYSQIELRIMAH LSGDKGLLTAFAAGKDIHRATAAEVFGLKLEDVTSEQRRSAKAINFGLIYGMSAFGLARQ LNIARGEAQRYMDLYFERYPGVLEYMERTRQQAAEQGYVETLDGRRLYLPEIHSRNGMRR KGAERAAINAPMQGTAADIIKRAMISVDAWLLQQKEPLVRMIMQVHDELVFEVHESVIEQ TVEKVRELMEQSLELAVPLKVDVGTGENWDQAH >gi|316917391|gb|ADCU01000024.1| GENE 156 192065 - 192919 351 284 aa, chain + ## HITS:1 COG:ECs4785 KEGG:ns NR:ns ## COG: ECs4785 COG0204 # Protein_GI_number: 15834039 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Escherichia coli O157:H7 # 1 275 28 302 310 430 69.0 1e-120 MVTILCSVPITLAGVLKLLLPIPIVWRYIASFADFMMWCWCEGLSILMKLNYGLNWEVYG LEDLSKENWYLVISNHKSWTDIVVLCVLLRNHIPMNKYFLKQQLAWIPFVGLACWALDMP FMKRYSRSHLLKHPELRGKDIEATRRSCEKFRIRPTTIVNFVEGTRSTKEKRIKSHSPYR NLLPPKAAGIAFTLNALGQQFDRVLNVTLLYPDNNRSPFLDLLCGRMKRIVVHVETLSVS SEMHGDYFNDKVFKRKFQLWLNNLWQQKDQLIDHLKKVYASPSK >gi|316917391|gb|ADCU01000024.1| GENE 157 192962 - 193585 625 207 aa, chain - ## HITS:1 COG:YPO0015 KEGG:ns NR:ns ## COG: YPO0015 COG0526 # Protein_GI_number: 16120369 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Yersinia pestis # 1 207 1 207 207 331 78.0 6e-91 MKKILLALVGIAMAFGASAAQFSEGDQYVKLDKSITGEPQVLEFFSFYCPHCYEFEEVYH VSDAVRKGLPEGVKMTKYHVEFLGPLGKQLTQAWAVAMALGVEDKITQPMFEAVQKTQSV QSPEDIRNVFIKAGVSAADYDGALNSFVVKSLVVQQEKAAEDLQLRGVPAIFVNGKYMVK NDGLDTSSMDSYVQQFSNVVNFLLKQK >gi|316917391|gb|ADCU01000024.1| GENE 158 193617 - 194603 406 328 aa, chain - ## HITS:1 COG:YPO0014 KEGG:ns NR:ns ## COG: YPO0014 COG2334 # Protein_GI_number: 16120368 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Yersinia pestis # 1 328 1 328 328 489 69.0 1e-138 MTNPAFSFQTLTPDLILDAIESTGIRIDSGLTELNSYENRVFQLMDEDRQRYVVKFYRPE RWSDGQIDEEHVFARELANAEIPVVAPLSLHGQTLHHFAGYAFTLFPSVGGRQYEIDNDD QLEWVGRYMARIHQVGKQQLFSERPTIGLDEYLYQPRDVLERTPLLPAKLKPAFLAALNS LIVEVEQYWTTDWAPVRLHGDCHPGNILWRDGPLFVDLDDARNGPVVQDLWMLLHGERQE QLIQLDILLEAYGEFADFDTQQLKLIEPLRAMRMVHYLAWVARRWQDPAFPKSFPWMVDE SFWLRQTSAFMEQVKLLRAPPLQLMPMY >gi|316917391|gb|ADCU01000024.1| GENE 159 194691 - 194960 259 89 aa, chain - ## HITS:1 COG:YPO0013a KEGG:ns NR:ns ## COG: YPO0013a COG3084 # Protein_GI_number: 16120367 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 89 1 89 89 160 85.0 7e-40 MKCHRVNELIELIHPAWQQEPDLNLVQFLQKLADEAGFKGNLGELTDDILIYHLKMRNSS STEAIPGLKKDYEEDFKTAILRARGVIKD >gi|316917391|gb|ADCU01000024.1| GENE 160 195126 - 195710 232 194 aa, chain + ## HITS:1 COG:YPO0013 KEGG:ns NR:ns ## COG: YPO0013 COG0746 # Protein_GI_number: 16120366 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Yersinia pestis # 3 193 22 213 213 209 52.0 2e-54 MHDIEGVILAGGRASRMGGDDKGLVMLNGKPLYQYVLETLKPQVKTLSISANRNLPIYQQ SGLKVFTDTLRDYPGPLAGMLSGLQQSKHEWVMFAPCDVPFIPSDIVQYLWMQRDGHKAA YIHDGNRAHPTIALLSRELISPLMKYLEQGERKLMIFLEQCNAQQVTYLAQDCFINFNTH EECQRCEHKLKEQE >gi|316917391|gb|ADCU01000024.1| GENE 161 195707 - 196225 332 172 aa, chain + ## HITS:1 COG:YPO0012 KEGG:ns NR:ns ## COG: YPO0012 COG1763 # Protein_GI_number: 16120365 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein # Organism: Yersinia pestis # 6 170 7 171 176 240 70.0 1e-63 MKTQIPLLGIAAYSGTGKTTLLKKLIPQLNARGIRIALIKHTHHDMDVDTPGKDSYELRK AGAEQTLVASDKRWALMTETPEQKPLDLQFLASKIDPERCDLILVEGFKHEAISKIALYR ASVGKPFTGIIDKHVLVLASDGHVDCDIPQLDINKTEKIADFIEQWLKQLKP Prediction of potential genes in microbial genomes Time: Wed May 18 15:48:29 2011 Seq name: gi|316917221|gb|ADCU01000025.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.25, whole genome shotgun sequence Length of sequence - 180957 bp Number of predicted genes - 171, with homology - 166 Number of transcription units - 98, operones - 36 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - SSU_RRNA 1 - 321 99.0 # HAFRR16SA [D:1..1500] # 16S ribosomal RNA # Hafnia alvei # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Hafnia. + Prom 681 - 740 7.4 1 1 Op 1 5/0.214 + CDS 847 - 1539 610 ## COG2186 Transcriptional regulators 2 1 Op 2 . + CDS 1551 - 2990 774 ## COG0477 Permeases of the major facilitator superfamily + Term 2991 - 3036 7.1 3 2 Op 1 13/0.000 - CDS 2965 - 3966 665 ## COG1609 Transcriptional regulators 4 2 Op 2 8/0.024 - CDS 3994 - 4917 813 ## COG0524 Sugar kinases, ribokinase family 5 2 Op 3 16/0.000 - CDS 4974 - 5861 898 ## COG1879 ABC-type sugar transport system, periplasmic component 6 2 Op 4 21/0.000 - CDS 5886 - 6866 1061 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 7 2 Op 5 9/0.024 - CDS 6873 - 8378 1511 ## COG1129 ABC-type sugar transport system, ATPase component 8 2 Op 6 4/0.262 - CDS 8386 - 8805 436 ## COG1869 ABC-type ribose transport system, auxiliary component - Prom 8868 - 8927 5.7 - Term 8998 - 9060 8.0 9 3 Tu 1 . - CDS 9084 - 10952 1234 ## COG3158 K+ transporter - Prom 11079 - 11138 5.2 + Prom 11023 - 11082 5.1 10 4 Op 1 7/0.095 + CDS 11199 - 12722 1046 ## COG0714 MoxR-like ATPases 11 4 Op 2 . + CDS 12724 - 14178 915 ## COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain - Term 14099 - 14149 4.2 12 5 Tu 1 . - CDS 14182 - 15174 1092 ## COG2502 Asparagine synthetase A - Prom 15201 - 15260 4.8 + Prom 15238 - 15297 6.2 13 6 Op 1 4/0.262 + CDS 15329 - 15790 391 ## COG1522 Transcriptional regulators + Prom 15800 - 15859 1.9 14 6 Op 2 5/0.214 + CDS 15881 - 16324 333 ## COG0716 Flavodoxins + Prom 16548 - 16607 6.6 15 7 Op 1 24/0.000 + CDS 16711 - 18600 1571 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division + Term 18613 - 18643 3.0 + Prom 18624 - 18683 8.3 16 7 Op 2 3/0.405 + CDS 18731 - 19351 524 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division + Prom 19794 - 19853 6.3 17 8 Op 1 8/0.024 + CDS 19993 - 20373 316 ## COG3312 F0F1-type ATP synthase, subunit I 18 8 Op 2 40/0.000 + CDS 20439 - 21218 777 ## COG0356 F0F1-type ATP synthase, subunit a 19 8 Op 3 37/0.000 + CDS 21269 - 21508 281 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 20 8 Op 4 38/0.000 + CDS 21574 - 22044 611 ## COG0711 F0F1-type ATP synthase, subunit b 21 8 Op 5 41/0.000 + CDS 22059 - 22592 526 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 22 8 Op 6 42/0.000 + CDS 22605 - 24146 1581 ## COG0056 F0F1-type ATP synthase, alpha subunit 23 8 Op 7 42/0.000 + CDS 24206 - 25069 931 ## COG0224 F0F1-type ATP synthase, gamma subunit 24 8 Op 8 42/0.000 + CDS 25103 - 26482 1386 ## COG0055 F0F1-type ATP synthase, beta subunit 25 8 Op 9 6/0.167 + CDS 26503 - 26922 434 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 26937 - 26974 5.5 + Prom 27029 - 27088 6.0 26 9 Tu 1 9/0.024 + CDS 27196 - 28563 1215 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) + Term 28751 - 28785 2.1 + Prom 28569 - 28628 2.0 27 10 Tu 1 2/0.667 + CDS 28795 - 30627 1734 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 30639 - 30666 1.5 + Prom 30691 - 30750 5.6 28 11 Op 1 39/0.000 + CDS 30824 - 31888 950 ## COG0226 ABC-type phosphate transport system, periplasmic component 29 11 Op 2 38/0.000 + CDS 31952 - 32938 1137 ## COG0573 ABC-type phosphate transport system, permease component 30 11 Op 3 41/0.000 + CDS 32940 - 33827 935 ## COG0581 ABC-type phosphate transport system, permease component 31 11 Op 4 32/0.000 + CDS 33901 - 34677 324 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 32 11 Op 5 1/0.738 + CDS 34692 - 35420 564 ## COG0704 Phosphate uptake regulator + Term 35608 - 35638 -0.7 + Prom 35743 - 35802 3.0 33 12 Op 1 31/0.000 + CDS 35846 - 36679 856 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 36692 - 36737 5.2 34 12 Op 2 17/0.000 + CDS 36751 - 37491 486 ## COG0765 ABC-type amino acid transport system, permease component 35 12 Op 3 . + CDS 37493 - 38227 652 ## COG0765 ABC-type amino acid transport system, permease component 36 13 Op 1 . - CDS 38248 - 38913 391 ## COG0637 Predicted phosphatase/phosphohexomutase 37 13 Op 2 . - CDS 38984 - 40759 1039 ## COG1001 Adenine deaminase - Prom 40791 - 40850 5.1 + Prom 40739 - 40798 5.9 38 14 Tu 1 . + CDS 40979 - 42316 1292 ## COG2252 Permeases + Term 42334 - 42364 4.3 - Term 42322 - 42352 4.3 39 15 Tu 1 . - CDS 42362 - 42928 605 ## COG0431 Predicted flavoprotein - Prom 42964 - 43023 2.1 40 16 Tu 1 . - CDS 43029 - 43760 366 ## COG2091 Phosphopantetheinyl transferase - Prom 43953 - 44012 4.5 41 17 Op 1 . + CDS 43797 - 44024 131 ## 42 17 Op 2 . + CDS 44090 - 44650 207 ## COG0398 Uncharacterized conserved protein + Term 44656 - 44682 1.7 - Term 44639 - 44676 5.4 43 18 Op 1 10/0.000 - CDS 44688 - 46052 1561 ## COG0486 Predicted GTPase - Prom 46079 - 46138 5.7 - Term 46081 - 46121 7.5 44 18 Op 2 22/0.000 - CDS 46142 - 47776 1514 ## COG0706 Preprotein translocase subunit YidC - Prom 47839 - 47898 3.4 - Term 47961 - 47994 3.1 45 18 Op 3 . - CDS 47999 - 48358 232 ## COG0594 RNase P protein component 46 18 Op 4 . - CDS 48374 - 48514 229 ## PROTEIN SUPPORTED gi|37528715|ref|NP_932060.1| 50S ribosomal protein L34 - Prom 48610 - 48669 5.3 47 19 Op 1 16/0.000 + CDS 49289 - 50689 1181 ## COG0593 ATPase involved in DNA replication initiation 48 19 Op 2 18/0.000 + CDS 50714 - 51814 1005 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) + Prom 51891 - 51950 1.9 49 19 Op 3 9/0.024 + CDS 51973 - 53049 766 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 50 19 Op 4 1/0.738 + CDS 53080 - 55494 2648 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 55507 - 55553 8.5 + Prom 55502 - 55561 3.4 51 20 Tu 1 . + CDS 55638 - 56453 716 ## COG0561 Predicted hydrolases of the HAD superfamily - Term 56343 - 56384 -0.3 52 21 Tu 1 . - CDS 56507 - 56701 107 ## + Prom 56993 - 57052 6.7 53 22 Op 1 1/0.738 + CDS 57177 - 57875 585 ## COG2186 Transcriptional regulators 54 22 Op 2 2/0.667 + CDS 57872 - 58774 407 ## COG3734 2-keto-3-deoxy-galactonokinase 55 22 Op 3 1/0.738 + CDS 58758 - 59375 497 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 56 22 Op 4 7/0.095 + CDS 59372 - 60520 917 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily + Prom 60580 - 60639 2.0 57 23 Tu 1 . + CDS 60753 - 62045 849 ## COG0477 Permeases of the major facilitator superfamily + Prom 62142 - 62201 3.1 58 24 Tu 1 . + CDS 62233 - 63516 870 ## YE4166 hypothetical protein - Term 63511 - 63548 0.4 59 25 Tu 1 . - CDS 63557 - 63814 146 ## COG5645 Predicted periplasmic lipoprotein - Prom 64006 - 64065 2.1 + Prom 63971 - 64030 3.9 60 26 Tu 1 4/0.262 + CDS 64245 - 64658 525 ## COG0071 Molecular chaperone (small heat shock protein) + Term 64698 - 64738 -1.0 + Prom 64682 - 64741 3.0 61 27 Tu 1 . + CDS 64787 - 65257 556 ## COG0071 Molecular chaperone (small heat shock protein) + Term 65289 - 65319 3.0 + Prom 65299 - 65358 6.6 62 28 Tu 1 . + CDS 65439 - 66722 921 ## COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase + Term 66745 - 66774 3.5 - Term 66733 - 66762 3.5 63 29 Tu 1 . - CDS 66787 - 67155 427 ## Spro_0077 hypothetical protein - Prom 67191 - 67250 3.1 - Term 67234 - 67270 7.3 64 30 Op 1 7/0.095 - CDS 67271 - 67918 433 ## COG3722 Transcriptional regulator 65 30 Op 2 11/0.000 - CDS 67991 - 69148 1336 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Term 69171 - 69200 1.1 66 30 Op 3 . - CDS 69268 - 71253 1687 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component - Term 71655 - 71692 5.0 67 31 Tu 1 . - CDS 71713 - 72432 697 ## ETAE_0011 hypothetical protein - Prom 72495 - 72554 4.1 - Term 72526 - 72572 4.2 68 32 Op 1 19/0.000 - CDS 72581 - 74650 2074 ## COG0751 Glycyl-tRNA synthetase, beta subunit 69 32 Op 2 . - CDS 74658 - 75590 888 ## COG0752 Glycyl-tRNA synthetase, alpha subunit - Prom 75630 - 75689 6.3 70 33 Tu 1 . - CDS 75754 - 76281 292 ## COG5571 Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion - Prom 76331 - 76390 5.3 + Prom 76332 - 76391 5.9 71 34 Op 1 5/0.214 + CDS 76503 - 77081 395 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) 72 34 Op 2 2/0.667 + CDS 77124 - 77537 453 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 77626 - 77658 -1.0 + Prom 77557 - 77616 2.7 73 35 Tu 1 . + CDS 77740 - 78399 213 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 + Term 78414 - 78449 4.0 + Prom 78428 - 78487 2.9 74 36 Tu 1 . + CDS 78518 - 79537 864 ## COG1609 Transcriptional regulators 75 37 Tu 1 . - CDS 79538 - 79789 273 ## COG0425 Predicted redox protein, regulator of disulfide bond formation + Prom 79898 - 79957 3.9 76 38 Op 1 . + CDS 80054 - 80719 604 ## COG1738 Uncharacterized conserved protein 77 38 Op 2 . + CDS 80790 - 81248 318 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 81250 - 81309 2.8 78 38 Op 3 . + CDS 81343 - 81918 565 ## ETAE_0023 hypothetical protein + Term 81926 - 81968 2.4 - Term 81918 - 81952 5.9 79 39 Tu 1 . - CDS 81960 - 83636 1016 ## EFER_3948 hypothetical protein - Prom 83672 - 83731 5.6 - Term 83701 - 83761 15.4 80 40 Tu 1 . - CDS 83773 - 85185 316 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 85349 - 85408 10.0 + Prom 85338 - 85397 8.4 81 41 Tu 1 . + CDS 85419 - 86633 1122 ## COG0786 Na+/glutamate symporter + Term 86642 - 86695 11.0 82 42 Op 1 4/0.262 - CDS 86688 - 88769 1803 ## COG1200 RecG-like helicase 83 42 Op 2 5/0.214 - CDS 88772 - 89464 576 ## COG0566 rRNA methylases 84 42 Op 3 18/0.000 - CDS 89469 - 91568 1672 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 85 42 Op 4 25/0.000 - CDS 91588 - 91863 467 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 86 42 Op 5 . - CDS 91918 - 92541 587 ## COG0194 Guanylate kinase - Prom 92594 - 92653 3.8 + Prom 92598 - 92657 2.9 87 43 Tu 1 . + CDS 92813 - 94546 583 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 88 44 Tu 1 . - CDS 94473 - 95090 686 ## COG2860 Predicted membrane protein - Prom 95198 - 95257 7.0 89 45 Tu 1 . - CDS 95291 - 96223 709 ## COG0583 Transcriptional regulator 90 46 Tu 1 . - CDS 96338 - 97207 763 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases + Prom 97200 - 97259 3.4 91 47 Op 1 3/0.405 + CDS 97431 - 97907 440 ## COG3238 Uncharacterized protein conserved in bacteria 92 47 Op 2 . + CDS 97911 - 98378 301 ## COG3238 Uncharacterized protein conserved in bacteria + Term 98411 - 98454 12.3 - Term 98406 - 98435 0.4 93 48 Tu 1 . - CDS 98463 - 99326 1051 ## COG1561 Uncharacterized stress-induced protein - Prom 99352 - 99411 4.7 + Prom 99431 - 99490 5.0 94 49 Tu 1 . + CDS 99531 - 100247 755 ## COG0689 RNase PH + Term 100256 - 100285 2.1 + Prom 100275 - 100334 2.2 95 50 Tu 1 . + CDS 100358 - 100999 714 ## COG0461 Orotate phosphoribosyltransferase + Term 101026 - 101058 3.0 - Term 101012 - 101044 3.0 96 51 Tu 1 . - CDS 101064 - 101660 422 ## COG1309 Transcriptional regulator 97 52 Op 1 5/0.214 - CDS 101761 - 102219 403 ## COG0756 dUTPase 98 52 Op 2 . - CDS 102197 - 103411 846 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase - Prom 103439 - 103498 4.6 + Prom 103605 - 103664 2.1 99 53 Tu 1 . + CDS 103734 - 104279 248 ## COG2003 DNA repair proteins + Prom 104299 - 104358 3.2 100 54 Op 1 16/0.000 + CDS 104518 - 104754 401 ## PROTEIN SUPPORTED gi|123440464|ref|YP_001004458.1| 50S ribosomal protein L28 101 54 Op 2 5/0.214 + CDS 104766 - 104933 280 ## PROTEIN SUPPORTED gi|15804177|ref|NP_290216.1| 50S ribosomal protein L33 + Term 104949 - 104986 6.4 + Prom 104968 - 105027 5.7 102 55 Tu 1 . + CDS 105051 - 105860 582 ## COG0266 Formamidopyrimidine-DNA glycosylase - Term 105807 - 105852 -0.5 103 56 Op 1 6/0.167 - CDS 105864 - 106343 377 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 104 56 Op 2 . - CDS 106355 - 107566 748 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase - Prom 107621 - 107680 2.2 105 57 Op 1 5/0.214 + CDS 108123 - 109145 214 ## COG0859 ADP-heptose:LPS heptosyltransferase 106 57 Op 2 . + CDS 109142 - 110266 657 ## COG0438 Glycosyltransferase 107 57 Op 3 . + CDS 110259 - 111056 437 ## c4454 lipopolysaccharide core biosynthesis protein RfaP 108 57 Op 4 . + CDS 111096 - 112103 224 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 109 57 Op 5 . + CDS 112132 - 112857 441 ## B21_03433 hypothetical protein + Prom 113087 - 113146 4.5 110 58 Tu 1 . + CDS 113278 - 113646 68 ## ROD_41931 lipopolysaccharide core biosynthesis protein RfaZ + Prom 113704 - 113763 6.7 111 59 Tu 1 . + CDS 113824 - 114861 197 ## COG0859 ADP-heptose:LPS heptosyltransferase - Term 114763 - 114806 9.2 112 60 Tu 1 6/0.167 - CDS 114809 - 115915 692 ## COG3307 Lipid A core - O-antigen ligase and related enzymes - Prom 115956 - 116015 5.5 113 61 Op 1 11/0.000 - CDS 116061 - 116993 528 ## COG0859 ADP-heptose:LPS heptosyltransferase 114 61 Op 2 6/0.167 - CDS 117023 - 118072 848 ## COG0859 ADP-heptose:LPS heptosyltransferase 115 61 Op 3 . - CDS 118107 - 119036 966 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 119223 - 119282 5.1 116 62 Op 1 9/0.024 + CDS 119347 - 120543 1026 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 117 62 Op 2 . + CDS 120557 - 121582 1041 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 121628 - 121663 3.4 - Term 121611 - 121654 1.7 118 63 Tu 1 . - CDS 121655 - 123187 674 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 123243 - 123302 2.8 - Term 123283 - 123332 4.8 119 64 Op 1 3/0.405 - CDS 123353 - 124270 395 ## COG2861 Uncharacterized protein conserved in bacteria 120 64 Op 2 4/0.262 - CDS 124330 - 125691 1208 ## COG4942 Membrane-bound metallopeptidase 121 64 Op 3 . - CDS 125701 - 127245 1501 ## COG0696 Phosphoglyceromutase - Prom 127268 - 127327 2.3 122 65 Tu 1 . - CDS 127444 - 127626 125 ## - Prom 127729 - 127788 3.7 + Prom 127525 - 127584 4.9 123 66 Op 1 7/0.095 + CDS 127625 - 128062 543 ## COG0607 Rhodanese-related sulfurtransferase 124 66 Op 2 9/0.024 + CDS 128080 - 128328 342 ## COG0695 Glutaredoxin and related proteins 125 66 Op 3 7/0.095 + CDS 128391 - 128864 573 ## COG1952 Preprotein translocase subunit SecB 126 66 Op 4 6/0.167 + CDS 128885 - 129883 1142 ## COG0240 Glycerol-3-phosphate dehydrogenase + Prom 129913 - 129972 2.9 127 67 Tu 1 . + CDS 130095 - 130916 769 ## COG1045 Serine acetyltransferase 128 68 Op 1 . - CDS 130983 - 131456 325 ## COG0219 Predicted rRNA methylase (SpoU class) 129 68 Op 2 40/0.000 - CDS 131499 - 132869 1321 ## COG0642 Signal transduction histidine kinase 130 68 Op 3 . - CDS 132866 - 133564 877 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 133503 - 133562 2.7 131 69 Tu 1 . + CDS 133716 - 134189 500 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein + Term 134229 - 134259 3.0 - Term 134054 - 134088 1.3 132 70 Tu 1 . - CDS 134271 - 135998 864 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Prom 136197 - 136256 3.1 133 71 Tu 1 . + CDS 136044 - 136151 59 ## + Prom 136156 - 136215 4.2 134 72 Tu 1 . + CDS 136332 - 137234 621 ## COG0053 Predicted Co/Zn/Cd cation transporters + Prom 137394 - 137453 4.7 135 73 Tu 1 . + CDS 137570 - 138532 1008 ## COG0205 6-phosphofructokinase + Term 138533 - 138569 1.2 + Prom 138618 - 138677 6.7 136 74 Tu 1 . + CDS 138738 - 139727 911 ## COG1613 ABC-type sulfate transport system, periplasmic component + Term 139749 - 139776 1.5 - Term 139737 - 139764 1.5 137 75 Tu 1 . - CDS 139796 - 140563 764 ## COG0149 Triosephosphate isomerase - Prom 140621 - 140680 2.9 138 76 Tu 1 . - CDS 140690 - 141370 328 ## ETAE_3448 hypothetical protein + Prom 141453 - 141512 4.6 139 77 Tu 1 . + CDS 141671 - 142102 270 ## COG3152 Predicted membrane protein + Term 142113 - 142146 2.1 - Term 142100 - 142133 2.1 140 78 Op 1 . - CDS 142155 - 142901 778 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 141 78 Op 2 . - CDS 142904 - 143527 545 ## COG2345 Predicted transcriptional regulator - Prom 143673 - 143732 7.8 + Prom 143892 - 143951 4.5 142 79 Tu 1 . + CDS 143975 - 145126 1074 ## COG0477 Permeases of the major facilitator superfamily - Term 145129 - 145171 7.2 143 80 Tu 1 . - CDS 145183 - 146193 1122 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins - Prom 146237 - 146296 4.9 - Term 146723 - 146769 -0.1 144 81 Op 1 18/0.000 - CDS 146778 - 148286 1441 ## COG0554 Glycerol kinase - Term 148332 - 148365 2.1 145 81 Op 2 . - CDS 148372 - 149217 785 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 146 81 Op 3 . - CDS 149229 - 149429 63 ## 147 82 Tu 1 . + CDS 149740 - 149982 425 ## COG3074 Uncharacterized protein conserved in bacteria + Term 150013 - 150041 3.0 - Term 150001 - 150029 3.0 148 83 Tu 1 7/0.095 - CDS 150056 - 150541 597 ## COG0684 Demethylmenaquinone methyltransferase - Prom 150567 - 150626 5.4 149 84 Tu 1 6/0.167 - CDS 150673 - 151590 851 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase - Prom 151679 - 151738 5.2 - Term 151686 - 151725 8.4 150 85 Op 1 24/0.000 - CDS 151758 - 153089 1224 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 151 85 Op 2 7/0.095 - CDS 153101 - 153550 599 ## COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit - Term 153651 - 153682 4.1 152 86 Op 1 . - CDS 153718 - 154593 587 ## COG3087 Cell division protein - Prom 154718 - 154777 1.8 153 86 Op 2 . - CDS 154826 - 155836 949 ## COG1609 Transcriptional regulators - Prom 155993 - 156052 6.7 154 87 Tu 1 . - CDS 156132 - 158327 1370 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase - Prom 158379 - 158438 4.2 + Prom 158427 - 158486 7.8 155 88 Tu 1 . + CDS 158584 - 158799 356 ## PROTEIN SUPPORTED gi|227113215|ref|ZP_03826871.1| 50S ribosomal protein L31 + Term 158817 - 158850 3.8 - Term 158874 - 158903 2.1 156 89 Tu 1 . - CDS 159056 - 160783 1449 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 160941 - 161000 8.8 - Term 161094 - 161128 4.3 157 90 Tu 1 . - CDS 161143 - 163740 2342 ## COG2352 Phosphoenolpyruvate carboxylase - Prom 163833 - 163892 4.1 158 91 Tu 1 . - CDS 164049 - 165197 735 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Prom 165245 - 165304 4.8 + Prom 165244 - 165303 7.3 159 92 Op 1 8/0.024 + CDS 165356 - 166378 671 ## COG0002 Acetylglutamate semialdehyde dehydrogenase 160 92 Op 2 2/0.667 + CDS 166411 - 167190 681 ## COG0548 Acetylglutamate kinase 161 92 Op 3 16/0.000 + CDS 167260 - 168474 1339 ## COG0137 Argininosuccinate synthase + Term 168580 - 168618 2.0 + Prom 168545 - 168604 3.8 162 92 Op 4 . + CDS 168631 - 170004 1341 ## COG0165 Argininosuccinate lyase + Term 170029 - 170055 1.7 - Term 170015 - 170043 2.1 163 93 Op 1 4/0.262 - CDS 170066 - 171514 1392 ## COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes - Term 171530 - 171558 1.3 164 93 Op 2 . - CDS 171604 - 172338 871 ## COG0678 Peroxiredoxin - Prom 172474 - 172533 3.4 + Prom 172305 - 172364 5.1 165 94 Tu 1 . + CDS 172490 - 173416 910 ## COG0583 Transcriptional regulator 166 95 Tu 1 . - CDS 173399 - 174799 434 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 175028 - 175087 4.9 + Prom 174904 - 174963 3.4 167 96 Op 1 . + CDS 175043 - 175711 489 ## COG1309 Transcriptional regulator 168 96 Op 2 . + CDS 175733 - 176122 330 ## ETAE_3473 hypothetical protein + Term 176175 - 176205 3.0 - Term 176162 - 176192 3.0 169 97 Tu 1 . - CDS 176220 - 177323 1134 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Prom 177350 - 177409 4.8 170 98 Op 1 2/0.667 + CDS 177703 - 179607 1297 ## COG4206 Outer membrane cobalamin receptor protein 171 98 Op 2 . + CDS 179552 - 180412 574 ## COG0796 Glutamate racemase Predicted protein(s) >gi|316917221|gb|ADCU01000025.1| GENE 1 847 - 1539 610 230 aa, chain + ## HITS:1 COG:YPO0010 KEGG:ns NR:ns ## COG: YPO0010 COG2186 # Protein_GI_number: 16120363 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 229 1 229 229 347 73.0 1e-95 MQLNAQQQAAQRNLSYLLAEKIGQRILSGEYQAGSILPGELELGDIYGVSRTAVREAVKM LAAKGMVLPRPRIGTRVMPSSNWNFLDQELLTWWLTRENFEHVKEHFLVLRTALEPQACL LAALHASDEQKAELSALMEEMRELNTRFDRERWIKVDVQFHQLIYKASANPFLTSFANLF SSVYQSYFRAITGDEVIKLSLHQDIVDAILTGNSMTAFISCQALLGQKDE >gi|316917221|gb|ADCU01000025.1| GENE 2 1551 - 2990 774 479 aa, chain + ## HITS:1 COG:STM3887 KEGG:ns NR:ns ## COG: STM3887 COG0477 # Protein_GI_number: 16767171 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 2 461 3 462 475 636 75.0 0 MTKTARSMAGLPWIAAMAFFMQALDATILNTAIPSIARSLDRSPLAMQSAIISYTLTVAM LIPVSGWVADKFGTRKVFIFAVSLFSLGSLSCALSGSLAMLVCSRVLQGIGGAMMMPVAR LALLRAYPRSELLPVLNFVTMPGLIGPVVGPMLGGWLVTVATWHWIFLINIPIGVAGIFY ARRYMPDFTAPTRRFDYVGFLVFGLSLVCLSTGMELFGENVLPMVYAWLILFAGVALLFI YVLHARVHPQPLIDLPLFKTRTFSIGIIGNVASRLGTGCIPFLMPLMLQVGFGYSAIIAG CMMAPTAIGSIIAKSTVTGVLRRFGYRKTLVCVTMIIGVMIAQFSLQTPDMPLWMLVLPL FLLGMVMSTQFTSMNTISLGDLTDKNASAGNSVLAVTQQLSISFGVAVSAAVLRFYDSLS FGSLVDHFHYTFITMGIVTILSALIFLMLRPTDGDALIKGRKAQLRRKSRETKSAQQNP >gi|316917221|gb|ADCU01000025.1| GENE 3 2965 - 3966 665 333 aa, chain - ## HITS:1 COG:ECs4695 KEGG:ns NR:ns ## COG: ECs4695 COG1609 # Protein_GI_number: 15833949 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 329 1 329 330 479 68.0 1e-135 MTTMKDVARLAGVSTSTVSHVINNNRFVSDSVRDKVLSAVKELNYAPSALARSLKLNQTR TIGMLVTTSNNPFFAEVVRGVERSCYERGYSLILCNTEGDVSRMNQSLETLLQKRVDGLL MMCTESYRPAREMLSRYPSLPTVMMDWAVFDGPNDVIQDNSFFGGQIATRHLLERGYTKI ACIAGPKDKTPAWERLEGFRHEMQMAGIPIPDEYVIFSDFEFSGGVNAMNQLLALPEPPH AVFTGNDAMAVGVYQALYRAGLKVGEDVAVIGYDDIEMSQYLSPPLTTIHQPKDELGELA VDTLLHRLMNLSLEPQTLVLTPELMVRDSVGQI >gi|316917221|gb|ADCU01000025.1| GENE 4 3994 - 4917 813 307 aa, chain - ## HITS:1 COG:YPO0008 KEGG:ns NR:ns ## COG: YPO0008 COG0524 # Protein_GI_number: 16120361 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Yersinia pestis # 1 305 1 305 308 433 78.0 1e-121 MQKGKLVVLGSINADHILNIEHFPRPGETVLGQQYKVAFGGKGANQAVAAGRSGADISFI ACVGQDDIGERICQQLSSDNIDTQAIGAIEGQTTGVALIFVNQDGENVIGISAGANAAVT PVYLSRHQKLIENADALLMQLESPLETVIAAAKLAREHNTQVILNPAPARELPDELLSNI DVITPNETEAEKLTGIAVKDDLGAQSAADILHQKGIKTVLITLGSRGVWLSQNQQGKTIP GFKVKAVDTIAAGDTFNGALVTALLEGVEINAAVRFAHAAAAIAVTREGAQPSVPWRKEI DSFLQSH >gi|316917221|gb|ADCU01000025.1| GENE 5 4974 - 5861 898 295 aa, chain - ## HITS:1 COG:ECs4693 KEGG:ns NR:ns ## COG: ECs4693 COG1879 # Protein_GI_number: 15833947 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 295 1 295 296 419 83.0 1e-117 MNMKKLATLISAAALSATLSANAMAQDTIALVVSTLNNPFFVSMKDGAQKEADKLGYKLV ILDSQNNPAKELANVQDLTVRGTKLMLINPTDSDAVGNAILMANQAKIPVITLDRAANKG EVVSHIASDNVAGGKAAGEFIAKKLGDNAKVIQLEGIAGTSAARERGDGFKKAQEEHKFN MLASQPADFDRTKGLNVMQNLLTAHPQVQAVFAQNDEMALGALRALQTAGKSDVLVVGFD GTADGVKAVQRGKLGATVAQQPEQIGVIGVETADKVLKGEKVPANIPVELKLVTE >gi|316917221|gb|ADCU01000025.1| GENE 6 5886 - 6866 1061 326 aa, chain - ## HITS:1 COG:ECs4692 KEGG:ns NR:ns ## COG: ECs4692 COG1172 # Protein_GI_number: 15833946 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 323 1 319 321 427 85.0 1e-120 MNTQTTQKQGGFSKDQLKTLLLEQKSLIALLVLIAVVSSMSPNFFTLNNLFNILQQTSVN AIMAVGMTLVILTSGIDLSVGSLLAVTGAVAASIVGLEVNAFIAVFAALALGAAIGGCTG VIVAKGKVQAFIATLVMMLLLRGVTMVYTNGSPINTGFSDAADLFGWFGIGRPLGIPTPI WLMVIVFALAWYMLHHTRLGRYIYALGGNESATRLSGISVDRVKIIVYSLCGLLSALAGV IEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIMGTLIGALILGFLNNGLNLLG VSSYYQMIVKAVVILLAVLVDNKSNK >gi|316917221|gb|ADCU01000025.1| GENE 7 6873 - 8378 1511 501 aa, chain - ## HITS:1 COG:rbsA KEGG:ns NR:ns ## COG: rbsA COG1129 # Protein_GI_number: 16131617 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Escherichia coli K12 # 1 501 1 501 501 830 85.0 0 MQPLLALKGIDKSFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYQKDAGT QHFLGKEVVFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRLGCIDWKKMYA EADKLLARLNIRYSSHRLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESL FKVINELKAEGRGIVYISHRLKEIFEICDDVTIFRDGQFIAERPVSELQEDSLIEMMVGR KLEEQYPRLNQPRGELRLQVKGLYGPGVENVSFDLYRGEILGVSGLMGAGRTELMKILYG ALPRKQGFVMLDGREVVTHSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFS RANGSLKHTEEQEAVSDFMRLFNVKTPSMDQPIGLLSGGNQQKVAIARGLMTRPKVLILD EPTRGVDVGAKKEIYQLINQFKQEGLSIILVSSEMPEVLGMSDRILVMHDGHLSGEFPIE QATQEVLMAAAVGKQYGVKQE >gi|316917221|gb|ADCU01000025.1| GENE 8 8386 - 8805 436 139 aa, chain - ## HITS:1 COG:STM3881 KEGG:ns NR:ns ## COG: STM3881 COG1869 # Protein_GI_number: 16767165 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Salmonella typhimurium LT2 # 1 139 1 139 139 189 69.0 1e-48 MKKGTLLNSEISYLISRLGHTDAIVVGDAGLPIPDSTQRIDLALTHGVPGFLQVVGVITQ EMQVEKAVIAQEMPSNNSVIHEQLLDHLKQLEQHQGNTITVEYVSHEQFKALSSASKAVI RSGECSPYANVLLYSGVTF >gi|316917221|gb|ADCU01000025.1| GENE 9 9084 - 10952 1234 622 aa, chain - ## HITS:1 COG:YPO0006 KEGG:ns NR:ns ## COG: YPO0006 COG3158 # Protein_GI_number: 16120359 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Yersinia pestis # 1 622 1 622 622 1023 85.0 0 MSSEHKRSLTTVTLAAIGVVYGDIGTSPLYTLRECFSGHYGFSVEPEIVFGFLSLIFWMQ ILIVSLKYLTFVMRADNAGEGGILTLMSLAGRNTAPKVTAILVILGLIGGSFFYGEVVIT PAISVMSAIEGLEIAAPSLDPYIVPLSILVLTILFFIQKHGTGSIGKLFAPVMVLWFLTL AILGARSIIDNPQVLTALNPKWAIGFFVEHRSMAFFALGAVVLSITGVEALYADMGHFGK KPIRLAWFFFVIPSLILNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATFATVIA SQAVISGVFSLTRQAVRLGYLPPMRIIHTSDMEAGQIYIPAINWALYISVVIVIASFEHS SNLAAAYGIAVTGTMVLTSILCCTVAVKNWHWNRFVVMILLAGLLCMDIPLFTANALKFF SGGWLPLALGLVMFIIMTTWKSERFRLLRRLHEHGNSLEAMIASLEKSPPVRVQGTAVYM SRAMNVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVTIEQLSPTFWRVVASY GFKETPNVEEIFHRCGLEGLPCRMMETSFFMSHESLILGNRPWYLKARGKLFMALSRNAL QAADQFEIPPNRVIELGTQVEI >gi|316917221|gb|ADCU01000025.1| GENE 10 11199 - 12722 1046 507 aa, chain + ## HITS:1 COG:YPO0005 KEGG:ns NR:ns ## COG: YPO0005 COG0714 # Protein_GI_number: 16120358 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Yersinia pestis # 6 495 1 490 517 655 71.0 0 MNGTIMTQSSQLAERISRLSHALENGLYERQEAIRLCLLAALCGESVFLLGPPGIAKSLI ARRLKFAFRHARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYLRLTHGYLPEAEIVFLDE IWKAGPAILNTLLTAINERRFRNGDSEDPIPMRLLVTASNELPEADSSLEALYDRMLIRL WLDKVQEKQNFRALITSSQDENANPVPEALSISDEEFYAWQPQIGKVTLPTHCFELIYQL RQRINTLDDAPYISDRRWKKALRLLQACAFFSGRSELAPLDLILLKDCLWHDFASRQMLN QQIQQMLTDQAYQQQNLLLQLQQAEANWLQSQRDQSQQQAMTLPVKSGLFNRKQVHSLPD DFPVGKVTLMLFKPLKIHDMQVTHIVTDSGDLSRWLQKGGEFRAKLNGIGFALPVDITLD DKHQLQVRDVSYQSTMLSLPGKRNGDVPADVQEKIQQIENTLAEQRRLFASHQPCLFVSS DWLAQIEASLAGIDEKLRTLKTTLKGA >gi|316917221|gb|ADCU01000025.1| GENE 11 12724 - 14178 915 484 aa, chain + ## HITS:1 COG:YPO0004 KEGG:ns NR:ns ## COG: YPO0004 COG2425 # Protein_GI_number: 16120357 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Yersinia pestis # 1 484 1 488 488 590 62.0 1e-168 MPSLEAVEAFLVVNENELMQDFLIGLMAAPQLAVFFEKFPRLRTILEGDLPSWRRRLEQR IKDTSVPDDLAREFTLYQHQLGLQSSDFFQQLPNTLATLREQESPFIYEADSLCPEGSAP RSISFQTLFLQRWRLSLIARTLTLHHQVLDEERELLQAELQQRMQISGALEPVLVDNENA AGKLWDLSRGELHHGDYQLMVQYGDFLAQQPELKKLAEQLGRSRASTAEDKQSTEQETAR VMVREPAIMPEEVSGIHQSDDILRLLPTELSMLGMDELEFEFYRRLLEKRLLSYRLQGDV WREQEFQRPITYQKTHQQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALLRVALADNRRCY IMLFSSSVVQYELTADSGIDQAIRFLSQRFRGGTDLAQCLSYTVAMMKQSAWKQADAVVI SDFIAQRLPEEMVKQIRQLQQNNSHCFHAVAMSEHGKPGIMKIFDHIWRFNTGIKGRLLR RWKR >gi|316917221|gb|ADCU01000025.1| GENE 12 14182 - 15174 1092 330 aa, chain - ## HITS:1 COG:STM3877 KEGG:ns NR:ns ## COG: STM3877 COG2502 # Protein_GI_number: 16767161 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Salmonella typhimurium LT2 # 1 330 1 330 330 522 77.0 1e-148 MKKQFIQKQQQISFVKSSFSRQLEKQLGLIEVQAPILSRLGDGTQDNLSGCEKAVQVKVK TLPQDTFEVVHSLAKWKRKTLGMHDFGPGEGLYTHMKALRPDEDRLTPIHSVFVDQWDWE RVMGDGQRTPEFLKETVRKIYAAMKATEAEVAAEFGIEPSLPEEIHFIHSETLLRRFPDL DAKGRERAIAKEFGAVFLIGIGGKLSHGKPHDVRAPDYDDWTSVGEEGFAGLNGDIVVWN PVLEDAFELSSMGIRVDADTLKRQLSLTDDEERMKLEWHQSLVRGEMPQTIGGGIGQSRL VMLMLKQKHIGQVQCGVWAPEVREQVDALL >gi|316917221|gb|ADCU01000025.1| GENE 13 15329 - 15790 391 153 aa, chain + ## HITS:1 COG:YPO0002 KEGG:ns NR:ns ## COG: YPO0002 COG1522 # Protein_GI_number: 16120355 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 153 1 153 153 258 87.0 3e-69 MAEIYQIDNLDRGILNALMENARTPYAELAKVFNVSPGTIHVRVEKMKQAGIITGACIQV SPKKLGYDVCCFIGIILKSAKDYPSALARLESLEEVVEAYYTTGHYSIFIKVMTRSIDAL QHVLINKIQTIDEIQSTETLISLQNPIMRDITP >gi|316917221|gb|ADCU01000025.1| GENE 14 15881 - 16324 333 147 aa, chain + ## HITS:1 COG:YPO0001 KEGG:ns NR:ns ## COG: YPO0001 COG0716 # Protein_GI_number: 16120354 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Yersinia pestis # 1 146 1 146 146 228 76.0 3e-60 MADITLISGSTLGSAEYVAEHLAEKLEEQGYSTETLHGPELDEVPLQGIWLVVTSTHGAG ELPDNLQPLFEQIETQQPDLTRVRFGAVGIGSSEYDTFCGGIKIVDRVLIASGAQRIGEV LEIDVTKHEIPEDPAEIWLTNWVKVIN >gi|316917221|gb|ADCU01000025.1| GENE 15 16711 - 18600 1571 629 aa, chain + ## HITS:1 COG:YPO4130 KEGG:ns NR:ns ## COG: YPO4130 COG0445 # Protein_GI_number: 16124238 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Yersinia pestis # 1 629 1 629 629 1142 89.0 0 MFYPDIFDVIIIGGGHAGTEAAMASARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV KEVDALGGLMATAIDHGGIQFRILNSSKGPAVRATRAQADRVLYRQAVRTALENQPNLMI FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPA IALSRRLRELPLRVNRLKTGTPPRIDARTIDFSVLAPQYGDNPSPVFSFMGNASQHPEQM PCYITHTNERTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNAHQIFLEPE GLTSNEIYPNGISTSLPFDVQMQIVRSMEGMENARIVRPGYAIEYDFFDPRDLKPTLESK FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRFANEDEGWSPRRDQAYLGVLVDDLCTL GTKEPYRMFTSRAEYRLMLREDNADLRLTAIGRELGLVDDVRWTHFNQKLENIERERQRL REIWVHPNSEQVAELNTLLKAPLSREANGEDLLRRPEIDYTKLTQLAPFAPALDDEKAAE QVEIQVKYEGYIARQQEEIEKHLRNENTLLPADLDYSLVSGLSNEVIAKLNDHKPSSIGQ ASRISGITPAAISILLIWLKKQGLLRRSA >gi|316917221|gb|ADCU01000025.1| GENE 16 18731 - 19351 524 206 aa, chain + ## HITS:1 COG:YPO4129 KEGG:ns NR:ns ## COG: YPO4129 COG0357 # Protein_GI_number: 16124237 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Yersinia pestis # 1 206 1 206 206 333 82.0 9e-92 MQKQLDTLLAQAGISLTDQQKQQLLGYVGLLDKWNKAYNLTSVRDPKEMLVRHILDSIVV NPFLQGNRFIDVGTGPGLPGIPLAIVRPESHFTLLDSLGKRVRFLRQVQHELKLTNIEPV QSRVEAFLPEPPFDGVISRAFASLQDMLSWCHHLPKPESGRFYALKGVRPDDELSQLPNG VELVSVERLHVPTLDGERHLVILKTN >gi|316917221|gb|ADCU01000025.1| GENE 17 19993 - 20373 316 126 aa, chain + ## HITS:1 COG:YPO4128 KEGG:ns NR:ns ## COG: YPO4128 COG3312 # Protein_GI_number: 16124236 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit I # Organism: Yersinia pestis # 1 122 1 122 127 128 65.0 2e-30 MSVTLFNGKAARKLLALQLLTFVLFGIGFATKEISWGYSAVLGGLSAWLPSVVFMLFALR HQAHTPAGGRVAWSFAIGEALKVVSTIVLMIVSLGWFKAALFPLGLTYIAVLVVQIVAPA MIGRSN >gi|316917221|gb|ADCU01000025.1| GENE 18 20439 - 21218 777 259 aa, chain + ## HITS:1 COG:YPO4127 KEGG:ns NR:ns ## COG: YPO4127 COG0356 # Protein_GI_number: 16124235 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Yersinia pestis # 2 259 3 274 274 402 83.0 1e-112 MSAGEISTPQEYIGHHLTQLQIGTGFWSINIDSMFFSVVLGLLFLVIFRKVAKNATSGVP GKLQCAVELVVGFVDSSVRDMYHGKSKVIAPLALTVFVWVFLMNLMDLLPIDFLPYIGEH VLGLPALRVVPTADVNITLSMALGVFILILFYSIKMKGVGGFVKELTMQPFNHPVFIPIN LILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWVLNVPWAIFHILIITLQ AFIFMVLTIVYLSMASEEH >gi|316917221|gb|ADCU01000025.1| GENE 19 21269 - 21508 281 79 aa, chain + ## HITS:1 COG:BU003 KEGG:ns NR:ns ## COG: BU003 COG0636 # Protein_GI_number: 15616633 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Buchnera sp. APS # 1 79 1 79 79 95 82.0 2e-20 MENLSMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLV DAIPMIAVGLGLYVMFAVA >gi|316917221|gb|ADCU01000025.1| GENE 20 21574 - 22044 611 156 aa, chain + ## HITS:1 COG:STM3869 KEGG:ns NR:ns ## COG: STM3869 COG0711 # Protein_GI_number: 16767153 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Salmonella typhimurium LT2 # 1 156 1 156 156 197 91.0 7e-51 MNLNATILGQAIAFILFVWFCMKYVWPPIMDAIEKRQKEIADGLSSAERAKKDLDLAQAN ATDQLKKAKADAQVIIEQANKRKAQIIDEAKVEAEQERNKIVAQAQAEIDAERKRAREEL RKQVATLAIAGAEKIIERSVDEAANSDIVDKLVAEL >gi|316917221|gb|ADCU01000025.1| GENE 21 22059 - 22592 526 177 aa, chain + ## HITS:1 COG:YPO4124 KEGG:ns NR:ns ## COG: YPO4124 COG0712 # Protein_GI_number: 16124232 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Yersinia pestis # 1 177 1 177 177 265 81.0 3e-71 MSEFITVARPYAKAAFDFAVEHQNVDRWQQMLAFCAEVTRNENVAEMLSGALAPETLSNL FIELCGDQLDESGQNFIKVMAENGRLLVLPEVLQQFNTLRDALEATVDVEVTSASTLSEE QLNKISAAMEKRLSRKVKLNCKIDKSVMAGVVIRAGDLVIDGSIRSRLERLADVLQS >gi|316917221|gb|ADCU01000025.1| GENE 22 22605 - 24146 1581 513 aa, chain + ## HITS:1 COG:STM3867 KEGG:ns NR:ns ## COG: STM3867 COG0056 # Protein_GI_number: 16767151 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Salmonella typhimurium LT2 # 1 513 1 513 513 943 94.0 0 MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGIIRVHGLADVMQGEMIALPGNRY AIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGEPIDGKGP VDNDGFSAVEAIAPGVIERQSVDQPVQTGYKSVDAMIPIGRGQRELVIGDRQTGKTALAV DAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGALANTIVVVASASESAALQYLAPY AGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLER AARVNAEYVEAYTKGEVKGATGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESNLF NAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQ LNHGQKVTELLKQKQYAPMSVAEQSLVLFAAERGYLEDVELAKIGSFEAALMAYVEREHA DLMQQINQTGAYNDEIEGKLKGILDTFKATQSW >gi|316917221|gb|ADCU01000025.1| GENE 23 24206 - 25069 931 287 aa, chain + ## HITS:1 COG:YPO4122 KEGG:ns NR:ns ## COG: YPO4122 COG0224 # Protein_GI_number: 16124230 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Yersinia pestis # 1 287 1 287 287 521 94.0 1e-148 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKTQDRMAASRPYAETMRKVIGHLALGN LEYKHPYLEERDIKRVGYLVVSTDRGLCGGLNINLFKKLLTDMKSWSEKGVEVDLALIGS KAASFFGSVGGNIVAQVTGMGDHPSLSELIGPVKVMLQAYDEGRLDKLYVVSNKFINTMS QEPQILQLLPLPPSDDGELKKKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVGGASAV >gi|316917221|gb|ADCU01000025.1| GENE 24 25103 - 26482 1386 459 aa, chain + ## HITS:1 COG:YPO4121 KEGG:ns NR:ns ## COG: YPO4121 COG0055 # Protein_GI_number: 16124229 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Yersinia pestis # 1 459 1 460 460 865 96.0 0 MATGKIIQVIGAVVDVEFPQDAVPKVYNALEVKGGAKLVLEVQQQLGGGVVRCIAMGTSD GLRRGLDVVDLEHPIEVPVGKATLGRIMNVLGEPIDMKGDIGEEDRWAIHREAPSYEELS NSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVG ERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLF IDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPA DDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGV QSILQRYQELKDIIAILGMDELSEDDKLVVARARKIQRFLSQPFFVAEVFTGSPGKFVSL KDTIRGFKGILDGDYDHLPEQAFYMVGTIEEAVEKAKKL >gi|316917221|gb|ADCU01000025.1| GENE 25 26503 - 26922 434 139 aa, chain + ## HITS:1 COG:STM3864 KEGG:ns NR:ns ## COG: STM3864 COG0355 # Protein_GI_number: 16767148 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Salmonella typhimurium LT2 # 1 139 1 139 139 233 91.0 1e-61 MAMTYHLDVVSAEQKMFSGLVQKIQVTGSEGELGVFPGHAPLLTAIKPGMVRIVKQHGEE EFIYLSGGILEVQPSSVTVLADTAIRGQDLDEARAMESKRKAEEHINNSHGDVDYAQASA ELSKAIAKLRVIELTKKAM >gi|316917221|gb|ADCU01000025.1| GENE 26 27196 - 28563 1215 455 aa, chain + ## HITS:1 COG:YPO4119 KEGG:ns NR:ns ## COG: YPO4119 COG1207 # Protein_GI_number: 16124227 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Yersinia pestis # 1 455 1 455 456 776 85.0 0 MSNSSLSVVILAAGKGTRMYSDLPKVLHPLAGKPMVQHVIDTALKLGAQNVHLVYGHGGD LLKDKLSDQPLNWVLQAEQLGTGHAMQQAAPHFSDDEDVLMLYGDVPLISEETLQRLLAA KPQGGIGLLTVKLVDPTGYGRIVRENDNVVGIVEHKDATAEQHKINEINTGILVASGRDL KRWLGKLDNNNAQGEYYITDIIALAHQEGNKIEAVHPDRLSEVEGVNNRLQLSALEREYQ SEQAQKLLLAGVMLLDPARFDLRGELIHGRDISIDTNVIIEGNVKLGDRVRIATGCVLKD CVIGDDCEISPYTVIENATLAAECTVGPFARLRPGADLAEKAHVGNFVEMKKARLGKGSK AGHLSYLGDAEIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTIGNGVT IAAGTTVTKDVAEKELVLSRVKQTHIQGWKRPVKK >gi|316917221|gb|ADCU01000025.1| GENE 27 28795 - 30627 1734 610 aa, chain + ## HITS:1 COG:YPO4118 KEGG:ns NR:ns ## COG: YPO4118 COG0449 # Protein_GI_number: 16124226 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Yersinia pestis # 1 610 1 609 609 1048 86.0 0 MCGIVGAVAQRDIAEILLEGLRRLEYRGYDSAGLAVVDNQGHMQRIRRVGKVQALSDAVV DSPMTGGTGIAHTRWATHGEPTEQNAHPHVSEHIAVVHNGIIENYESLRTLLIERGYHFT SETDTEVIAHLTHWEQQQSGGSLLEVVQRVIPQLRGAYGTVVMDGRHPDVLVTARSGSPL VIGCGMGENFIASDQLALLPVTRRFIFLEEGDIAEVTRRTVKIFDKDGNAVERAEIESNV QYDAGDKGAYRHYMQKEIYEQPLAIKNTLEGRFSHGKVDLSELGEKADTLLAQVEHIQII ACGTSYHSGMVARYWFESLAGVPCDVEIASEFRYRKSAVRKNSLIITLSQSGETADTLAA LRLSKEIGYLGSLAICNVASSSLVRESDLALMTKAGTEIGVASTKAFTTQLTVLLMLVAR IGRLHTMPEKVEQDIVHALQALPARIEQMLSMDQGIEDLAEDFMDKQHALFLGRGDQYPI AMEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVVVIAPNNELLEKLKSNIEEVRA RGGLLYVFADKDAGFTDSEGMRIISLPHVEEVIAPIFYTVPLQLLSYHVALIKGTDVDQP RNLAKSVTVE >gi|316917221|gb|ADCU01000025.1| GENE 28 30824 - 31888 950 354 aa, chain + ## HITS:1 COG:YPO4117 KEGG:ns NR:ns ## COG: YPO4117 COG0226 # Protein_GI_number: 16124225 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Yersinia pestis # 15 354 7 346 346 533 82.0 1e-151 MRSLVVTKKMVTNKTVAAIVAATCSLTTMSAFAATSLTGAGATFPAPVYAKWADTYQKET GNKVNYQGIGSSGGVKQIIAKTVDFGASDAPLTDDKLAADGLFQFPTVIGGVVLAVNIPG LKSGELTLDGKTLGDIYLGNIKKWNDPAITKLNPGLKLPDTNIAVVRRADGSGTSYVFTN YLAKVNPDWKSKVGAGSTVNWPTGLGGKGNDGVAAFIQRLPGSIGYVEYAYVKQSKLAYT KLISADGDAVLPTEESFSNAAKGADWSKSFAQDLTNQKGANAWPISSTTFILVHKEQQKP EQGEAVLKFFDWAYKNGGKEASALDYAPLPSSVVEQIRAAWKTNVKDSSGKALY >gi|316917221|gb|ADCU01000025.1| GENE 29 31952 - 32938 1137 328 aa, chain + ## HITS:1 COG:YPO4116 KEGG:ns NR:ns ## COG: YPO4116 COG0573 # Protein_GI_number: 16124224 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Yersinia pestis # 18 328 8 318 318 492 90.0 1e-139 MADHPLSKPSLPKKESKIKPPSKNGDVIFGALVKLAALITLLLLGGIIVSLFIASLPSIQ KFGFSFLWSKEWDAPAEQFGALVPIYGTIVTSIIALVIAVPVSFGIALFLTELAPNWLRR PLGVAIELLAAIPSIVYGMWGLFVFAPLFAEYFQTPVGDVLSGIPIVGELFAGPAFGIGI LAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVMSRIVLPFTKNGVIGG IMLGLGRALGETMAVTFVIGNTYQLDSASLFMPGNSITSALANEFAEAESGLHTAALMEL GLILFVITFIVLALSKLMILRLDKNEGR >gi|316917221|gb|ADCU01000025.1| GENE 30 32940 - 33827 935 295 aa, chain + ## HITS:1 COG:STM3855 KEGG:ns NR:ns ## COG: STM3855 COG0581 # Protein_GI_number: 16767139 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Salmonella typhimurium LT2 # 1 294 1 294 296 468 89.0 1e-132 MATIDMHDAQSLANSRRKMQAWRRQKNRIALFLSMATMVFGLFWLVWILFSTITKGVDGM SIALFTEMTPPPNSEGGGLANAIAGSGLLILWATVIGTPLGIMAGIYLAEYGRKGWLANF IRFINDILLSAPSIVVGLFVYTIVVAKMQHFSGWAGVIALALLQIPIVIRTTENMLKLVP DSLREAAYALGTPKWKMISAITLKASVSGIITGVLLAIARIAGETAPLLFTSLSNQFWST DMSQPIANLPVTIFKFAMSPFAEWQQLAWAGVLLITLCVLLLNILARVVFAQKKR >gi|316917221|gb|ADCU01000025.1| GENE 31 33901 - 34677 324 258 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 254 1 263 329 129 31 9e-29 MSIVTDTTNSKIQVRDLNFYYGKFHALKNISLDIEKNKVTAFIGPSGCGKSTLLRTFNKM FQLYPEQRAEGEILLDGQNILTDNSDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFE KLSRAEMDERVQWALTKAALWNESKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDE PCSALDPISTSKIEELITELKEDYTVVIVTHNMQQAARCSDHTAFMYLGELVEFSDTDTL FTAPAQKQTEDYITGRYG >gi|316917221|gb|ADCU01000025.1| GENE 32 34692 - 35420 564 242 aa, chain + ## HITS:1 COG:YPO4113 KEGG:ns NR:ns ## COG: YPO4113 COG0704 # Protein_GI_number: 16124221 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Yersinia pestis # 1 235 1 235 240 429 94.0 1e-120 MDNLNLNKHISGQFNAELEHIRTQVMTMGGMVEQQLSDAITAMHNQDGELAKRVIEGDKK VNMMEVAIDEACVKIIAKRQPTASDLRLVMAIIKTISELERIGDVADKICRTALEKFSHQ HQPLLVSLESLGRHTVQMLHDVLDAFARMDLDEAVRIYREDKKVDQEYEGIVRQLMTYMM EDTRTIPSVLTALFCARSIERIGDRCQNICEFIFYFVKGQDFRHLGGDELDQLLAKDGNK PS >gi|316917221|gb|ADCU01000025.1| GENE 33 35846 - 36679 856 277 aa, chain + ## HITS:1 COG:YPO4111 KEGG:ns NR:ns ## COG: YPO4111 COG0834 # Protein_GI_number: 16124219 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Yersinia pestis # 18 273 24 279 284 416 85.0 1e-116 MKQRVLVLSLLASLSAVSGFAHADKLDDIQKAGVVRVAVFDSNPPFGYVDPQTKKLVGYD VDVADAIGKALGVKVELRATNPANRIPLLASKKVDLIAANFTITPERAKEVNFSVPYFRT GQKFIARKGVLKQPDDIAKLRIGADKGTVQEITLRDKYPTAKVISYDDTPLAFAALRNGN VQAITQDDAKLVGLLANVPDAAKADFEISPFSITKEYQGIGLPKGEDRLTDKVNTALENL EKEGQAEKIYDRWFGPETKSAQPRGDFKIGPVETSKS >gi|316917221|gb|ADCU01000025.1| GENE 34 36751 - 37491 486 246 aa, chain + ## HITS:1 COG:YPO4110 KEGG:ns NR:ns ## COG: YPO4110 COG0765 # Protein_GI_number: 16124218 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Yersinia pestis # 1 239 1 239 245 315 73.0 6e-86 MNGQSFYDFILAPQYLHWLWSGFLITLVISACTIVLSTILGLILAALRDSSSRWLSLPVI AYSSVFRNTPLLVQLFFWYFGAGQLLPSVVMQWLNTPHEWMFDGWTIAWPSFEFLAGLVG LTLYSAAFISEEIRAGIRGVASGQKQASQALGLSLWQSMRYVVLPQAVKIALPPLLGQYM NIIKNSSLTMAIGVAELSYASRQVETETLKTFQAFGVATLLYVLIIALMEGWGMWYQQRR RMQERY >gi|316917221|gb|ADCU01000025.1| GENE 35 37493 - 38227 652 244 aa, chain + ## HITS:1 COG:YPO4109 KEGG:ns NR:ns ## COG: YPO4109 COG0765 # Protein_GI_number: 16124217 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Yersinia pestis # 1 244 1 251 251 336 77.0 3e-92 MDFTIIHDNLSYLLWGQFPDGPLGGAALTLLMSLIAGLASAILGTLLGVALAMSRGWLGA VLATVLGFFRAIPVIMLIFWTYFLLPIVFGVDIPEITTVVCALALIASSYLAHAIAAGIH AVGRGQWQAGLSLGLNRWQVLGNVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVSELT FLATQVNNRSMVYPMEVFMFVAGVYFVMCLALDLAANHLSRRFTSQNVVVKRRWWQLKPA LPAS >gi|316917221|gb|ADCU01000025.1| GENE 36 38248 - 38913 391 221 aa, chain - ## HITS:1 COG:STM3852 KEGG:ns NR:ns ## COG: STM3852 COG0637 # Protein_GI_number: 16767136 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Salmonella typhimurium LT2 # 1 221 1 221 221 300 61.0 1e-81 MTPISCIFFDCDGTLVDSEYLCSKAYVHMFAHYGVHLSLDRVFKEFKGVKLYEIIERIKQ EHEFESDRDEMEQIYRDEVARLFKTELKPIPHAESLLAQITVPMCTTSNGPVSKMQNSLG STGMLGYFGDRLYSGYDIQSWKPDPDLMFHAANEMGVDIKACILVDDSPSGVQSGIAAGI PVFYYCGDAHNPVIEHPLVTSFDDLRQLPELWRARGWSLTK >gi|316917221|gb|ADCU01000025.1| GENE 37 38984 - 40759 1039 591 aa, chain - ## HITS:1 COG:ECs4602 KEGG:ns NR:ns ## COG: ECs4602 COG1001 # Protein_GI_number: 15833856 # Func_class: F Nucleotide transport and metabolism # Function: Adenine deaminase # Organism: Escherichia coli O157:H7 # 3 582 4 582 588 785 67.0 0 MESINNKHTQSLSREEMIRLLAVSRGDEAADCIIDNVRILDLINGGEISGPIVICNNSIA GVGSAYAGAVAHKRIDANNAVAVPGFIDSHLHIESSMMTPVTFESATLPLGVTSIVCDPH EIVNVMGEQGLEWFLRCAEQAQQNQFVQISSCVPALSGSDINGAEFPLSEMLKYRDHSHV LGLAEMMNFPGVIAGDSDIMDKLDAFRHLTLDGHSPMLSGKNLNGYLAAGIENCHETLAL QEGREKLSLGMALMIREGSAARNLDTLAPLISEFSSPQCMLCTDDRNPWEIAHEGHINAL IYRLINQHNIPAHVAYRVASWSAARHFGLKRLGLIAPGKRADIVLLSDVQQVVIQQVIVG GKVVDAQRLKETCEQKHQQTQPPVQNTIRRNPVNAAELALPLEVGVSYRAIQIIPNELIT CTLPVTWLGEKFDHDDVCHIAVMERYGHQKIPARGLLQNFGLQRGAMAATVSHDSHNIVV IGHHPRDMAVAVNQLIANGGGLCVADEGEVKSHLALPIAGLMSDKSAADIADDISHLKAA CRACGVTLNEPFIQMAFLSLPVIPSLKLTSLGLFDVDRFAFTETRFSSPSD >gi|316917221|gb|ADCU01000025.1| GENE 38 40979 - 42316 1292 445 aa, chain + ## HITS:1 COG:YPO4107 KEGG:ns NR:ns ## COG: YPO4107 COG2252 # Protein_GI_number: 16124215 # Func_class: R General function prediction only # Function: Permeases # Organism: Yersinia pestis # 4 443 2 441 442 663 90.0 0 MNNSTSNSAQGQGLFERVFKLQEHGTTAKTEMIAGITTFLTMVYIVFVNPQILGAAGMDT QAVFVTTCLIAAFGSIFMGLLANLPVALAPAMGLNAFFAFVVVGAMGLTWQVGMGAIFWG AVGLLLLTIFRIRYWMIANIPMSLRVGITSGIGLFIAMMGLKNAGIIVSNTDTLVAVGSL TSHSVLLGALGFFIIAILSSRNFHAAVLVSIVVTTLIGWALGDVHYTGLFSMPPNVTSVV GQVDLAGALNVGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADKNGKFPRMKQALYVDSI SSVVGSFFGTSSVTAYIESTSGVSVGGRTGLTAVVVGILFLLVIFLSPLAGMVPAYAAAG ALIYVGVLMTSSLARVKWDDLTEAVPAFITAVMMPFSFSITEGIALGFISYCIMKLGTGR WREISPCVVIVALLFVLKIVFVDAH >gi|316917221|gb|ADCU01000025.1| GENE 39 42362 - 42928 605 188 aa, chain - ## HITS:1 COG:ECs4650 KEGG:ns NR:ns ## COG: ECs4650 COG0431 # Protein_GI_number: 15833904 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Escherichia coli O157:H7 # 1 187 1 186 188 277 73.0 7e-75 MSDKPLKIVTLLGSLRKGSYNAIVANALPDLAPKDVTIEALPSIRDIPLYDADLQQDEGF PAQIEAIAEEIRQADGVIIVTPEYNYSVPGGLKNAIDWISRLPNQPLAGKPVAIQTSSMG PIGGARCQYHLRQILVFLDCQVMNKPEFMGGVIQSKVDEQKGILTDTSTIEFLGKQLSAF ADYVRRVG >gi|316917221|gb|ADCU01000025.1| GENE 40 43029 - 43760 366 243 aa, chain - ## HITS:1 COG:yieE KEGG:ns NR:ns ## COG: yieE COG2091 # Protein_GI_number: 16131580 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Escherichia coli K12 # 1 243 5 250 253 137 33.0 2e-32 MENHFAWWYLSNRPLDVYRLTEDLIATSLHYSPKRRERFLHGRALLAELMFQLYGYEKLP RLAIAPSGRPCFVDPTLPDFSLGYAGGVVAVMLGSNGKVGMDVEVIRARQGGFIHLQQQH LTSSEKIWIDGQADRLEATTQLWAIRESVLKISGLGTSGLQTLRLQPNAGKLRSTATPQV ETISAIQGEIAWACSKSPTLGQLNYWLMDKNNQLINITAEKNTELKESTTYLRFTSHSPI QTL >gi|316917221|gb|ADCU01000025.1| GENE 41 43797 - 44024 131 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLPNNYSVSVSGLWIIYLSRVFSHSILCELCGSALIKLTNSLLALGKPMAYWSAENKMGM RSYDAKEGLSGESLG >gi|316917221|gb|ADCU01000025.1| GENE 42 44090 - 44650 207 186 aa, chain + ## HITS:1 COG:ECs2456 KEGG:ns NR:ns ## COG: ECs2456 COG0398 # Protein_GI_number: 15831710 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 2 177 52 227 252 191 59.0 8e-49 MLQQWISVHGWIGIIAYVLLFVIASLFLFPGSVLVIAGGIVFGTFYGTIISLFAATLSSS LSFLLARYLGRSWLLQRFSGNKKFEQIEQGIQHYGVDFLIFTRLIPLFPYNIQNYAYGLT GIPFWRYCMISCLTILPGTFIFTLMASELAENGVTLEVTMKLVLCGVVLFVLTQITRRVF SKRFAK >gi|316917221|gb|ADCU01000025.1| GENE 43 44688 - 46052 1561 454 aa, chain - ## HITS:1 COG:YPO4103 KEGG:ns NR:ns ## COG: YPO4103 COG0486 # Protein_GI_number: 16124211 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Yersinia pestis # 1 454 1 454 454 791 91.0 0 MSQSDTIVAQATPPGRGGVGILRISGRQAEEVAMALLGKLPKPRYADYLPFKDADGSVLD QGIALYFPGPNSFTGEDVLELQGHGGPVILDLLLKRILLMPNVRIARPGEFSERAFLNDK LDLAQAEAIADLIDASSEQAARSAVNSLQGAFSNRVNQLVEALTHLRIFVEAAIDFPDEE IDFLSDGKIEAQLNGVMGELQAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWNEIEQADRVL FMVDGTTTDAIEPATIWPEFMARLPKTLPITVVRNKADVTGETLGLSEVNGYSLIRLSAR TGEGIDVLRDHLKQSMGFTSNMEGGFLARRRHLQALETAAMHLEQGKEQLLSAYAGELLA EELRLAQQALSEITGEFTSDDLLGRIFSSFCIGK >gi|316917221|gb|ADCU01000025.1| GENE 44 46142 - 47776 1514 544 aa, chain - ## HITS:1 COG:YPO4102 KEGG:ns NR:ns ## COG: YPO4102 COG0706 # Protein_GI_number: 16124210 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Yersinia pestis # 1 543 1 546 546 915 85.0 0 MDSQRNLLLIALLFVSFMIWQAWQTDNNPQPTAQTAGQTANTTTADASSQAVPESGQGKL ITVKTDVLSLTINTRGGDIEQANLLAYPATLGSDKPFELLETTPDFIYQAQSGLTGKNGP DNPANGDRPLYTADQTNFELVNGQDELRIPLTYTAKDGVVYTKTFVLKRGDYAIGVDYKV KNSSAQPLDLTLFGQLKQSIDLPKHRDTGSSNFALHTFRGAAYSSSDDKYQKYAFDKDPL NITTKGGWVAMLQQYFATAWIPQTNSTNQFYTANLGNGLSAIGFKGEPVVVAPGTEKNLN ATLWVGPEIQSDMAAVAPHLDLTVDYGWLWFISQPLFKLLKFIHSFIGNWGFSIIVITFI VRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERIGDDKQRMSQEMMALYKSEKVNPLGGCL PLVIQMPIFLALYYMLMGSVELRQAPFALWIHDLAAQDPYYILPILMGITMFFIQKMSPT TVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTILQQQLIYRGLEKRGLHSRD KKKS >gi|316917221|gb|ADCU01000025.1| GENE 45 47999 - 48358 232 119 aa, chain - ## HITS:1 COG:YPO4101 KEGG:ns NR:ns ## COG: YPO4101 COG0594 # Protein_GI_number: 16124209 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Yersinia pestis # 1 119 1 119 119 192 87.0 2e-49 MVKLAFPRELRLLTPNHFNFVFQQPQRAGTPQITILGRMNTLGHPRIGLTVAKKYVKRAH ERNRIKRLTRESFRLSQHSLPAMDFVVIAKKGVQELDNRALTEILEKLWRRHCRQARVS >gi|316917221|gb|ADCU01000025.1| GENE 46 48374 - 48514 229 46 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|37528715|ref|NP_932060.1| 50S ribosomal protein L34 [Photorhabdus luminescens subsp. laumondii TTO1] # 1 46 1 46 46 92 100 9e-18 MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRTRLTVSK >gi|316917221|gb|ADCU01000025.1| GENE 47 49289 - 50689 1181 466 aa, chain + ## HITS:1 COG:YPO4097 KEGG:ns NR:ns ## COG: YPO4097 COG0593 # Protein_GI_number: 16124206 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Yersinia pestis # 1 466 1 462 462 882 95.0 0 MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNIN GLLNDFCGSDAPVLRFEVGTKPATAAIPVQSPVMASVSAPVIQTAARNVAPMRPSWDNSP AQPELSYRSNVNPKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHL LHAVGNGIMARKANAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFA NKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELET RVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVRE ALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALAKELTNHS LPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS >gi|316917221|gb|ADCU01000025.1| GENE 48 50714 - 51814 1005 366 aa, chain + ## HITS:1 COG:YPO4096 KEGG:ns NR:ns ## COG: YPO4096 COG0592 # Protein_GI_number: 16124205 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Yersinia pestis # 1 366 1 366 366 671 90.0 0 MKFIVEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVEDGHLLLTGTDLEMEMIARVPLA QEHETGATTVPARKFFDICRGLPDGAEITVVLDGDRMLVRSGRSRFSLSTLPAADFPNLD DWQSEVEFTLPQATLKKLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC SMPIGQSVPSHSVIVPRKGVMELSRLLDGGETPLRLQIGSNNIRAHVGGFIFTSKLVDGR FPDYRRVLPKNPDKTLKAGCDELKQAFARAAILSNEKFRGVRLYVSHNQLKITANNPEQE EAEEILDVNYEGTDLEIGFNVSYVLDVLNALKCEDVHMLLTDSVSSVQIEDAASQSAAYV VMPMRL >gi|316917221|gb|ADCU01000025.1| GENE 49 51973 - 53049 766 358 aa, chain + ## HITS:1 COG:YPO4095 KEGG:ns NR:ns ## COG: YPO4095 COG1195 # Protein_GI_number: 16124204 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Yersinia pestis # 1 358 1 357 361 615 87.0 1e-176 MALTRLTIRDFRNIESADLAPAEGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQAGRV IRHDQNEFVLHGRIDTGAERELSVGLSKSRAGDSKVRIDGSDGHKVAELAQMLPMQLITP EGFTLLNGGPKFRRAFLDWGCFHSDPGFFVAWSNLKRLLKQRNAALRQVTRYSQLRPWDQ ELIPLAERISALRAQYSAAIAEDISATCAQFLPEFALTFSFQRGWDKESDYVELLERQFE RDRALTYTAVGPHKADFRIRAEGTPVEDLLSRGQLKLLMCALRLAQGEYLTRHSGRRCLY LIDDFASELDTGRRRLLADRLKATGAQVFVSAVSAEQVSDMVDEKGKMFRVEQGKIAV >gi|316917221|gb|ADCU01000025.1| GENE 50 53080 - 55494 2648 804 aa, chain + ## HITS:1 COG:YPO4094 KEGG:ns NR:ns ## COG: YPO4094 COG0187 # Protein_GI_number: 16124203 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Yersinia pestis # 1 803 1 803 804 1427 88.0 0 MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDII VTIHSDNSVSVQDDGRGIPTGLHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV SVVNALSEKLELVIRREGKVHEQTYAHGVPQFPLKVVGDTETTGTTVRFWPSMETFSNHT EFQYDILAKRLRELSFLNSGVSIRLRDKRDNREDHFHYEGGIKAFVEYLNKNKTPIHPNV FYFSTVKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNSYMEKE GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVETQMNELLAEY LQENPGDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPAHSEL YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKKG KQEQYIKDDDAMDQYQLSIALDGAELHINADAPAMSNEHLEKLVTEHYQVQKLIGRMERR YPKALLNQLIYHPTLVEADLSDQAKVQQWIESLVNTLNEKEVHGSTYSAIVTENRERQMF EPSLRIRTHGVDTDYPLDFDFIHGAEYRRICNLGGTLRDMIEDGAFVMRGERRQPITSFE QALEWLVKESRRGLAIQRYKGLGEMNPEQLWETTMDPQSRRMLRVTVKDAVAADQLFTTL MGDAVEPRRAFIEENALRAANLDF >gi|316917221|gb|ADCU01000025.1| GENE 51 55638 - 56453 716 271 aa, chain + ## HITS:1 COG:YPO4093 KEGG:ns NR:ns ## COG: YPO4093 COG0561 # Protein_GI_number: 16124202 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Yersinia pestis # 1 268 1 268 269 330 58.0 1e-90 MSIKLIAIDLDGTLLNNDRAVAPAVKQAILAAKAQGVHILLATGRPFIGAQQYLRELGLD KAGCYCLCNNGGLIVHAENGEPLFETLLDFSDYLYLESLSHQIGSHFHALDHHKLYTANR DISKHTVQESFITGIPLYFCPVDEMDKNTRFPKVMMIDDPEVLEKAIARIPPEAYERYTI VRSSPNFLEILNKDADKGKGVAQMAEYLNIPRENVMCIGDHGNDLAMVKYAGVGVAMGNA EPSIKEAAQFVTTTNQEDGVAVAINKFVFEK >gi|316917221|gb|ADCU01000025.1| GENE 52 56507 - 56701 107 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAIAVRSVKTEMMKRGHPRSGLVGGAKPGCKAAAIEPPCSDADTMLRRYSVLWAYETFHR TDGN >gi|316917221|gb|ADCU01000025.1| GENE 53 57177 - 57875 585 232 aa, chain + ## HITS:1 COG:STM3830 KEGG:ns NR:ns ## COG: STM3830 COG2186 # Protein_GI_number: 16767115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 6 232 3 229 229 351 80.0 7e-97 MNKTELSKTDRIIVEMGRQIISGKYVPGAALPAEAELCEEFQTSRNIIREVFRALTAKRL VEVKRYRGAFVAPRNQWNYLDTDVLQWVLANDYDPRLISALSEVRNLVEPSIARWAAERA TSSELAVIEAALNDMTMNHQDFDAFNEADIRFHEAVLSSVHNPVLQQLSVAISSLQRAVF ERTYMPDEDNMPRTLREHQTLYDAIRHQNADAAEKAALAMIASSTRRLKDET >gi|316917221|gb|ADCU01000025.1| GENE 54 57872 - 58774 407 300 aa, chain + ## HITS:1 COG:STM3829 KEGG:ns NR:ns ## COG: STM3829 COG3734 # Protein_GI_number: 16767114 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-galactonokinase # Organism: Salmonella typhimurium LT2 # 1 299 1 291 292 279 50.0 5e-75 MSENFIAIDWGSTNLRAWLYVQGLCVDFLSSESGVTRLQGQTPQQVFSHLMQPWFQDYGD LPAIMAGMVGSNAGWQVVPYLSCPVALGEVTQHLTTIRSPNSSVIHIIPGLCINRPDNSN VMRGEETQIIGAHQLHKSSRYLMPGTHSKWVQMSGDYVDDFRTVITGELHYLLLQHGLIG IGIGEQHVSQDAFQQGLDIGFNDAGVIRNLFEVRAAHLLGKRSKGTVSDWLSGVLIGNEI AQMQQTYALHASDNVTLIGSPKLNERYATALNFAGIAYQTIDGDIAFQTGIRSIANALGY >gi|316917221|gb|ADCU01000025.1| GENE 55 58758 - 59375 497 205 aa, chain + ## HITS:1 COG:RSc2752 KEGG:ns NR:ns ## COG: RSc2752 COG0800 # Protein_GI_number: 17547471 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Ralstonia solanacearum # 1 201 3 203 213 238 62.0 5e-63 MPWVTKLPLIAILRGIKPQEVEEHITALLTAGFDAIEIPLNSPEWEKSISLAVKLFGHRA LIGAGTVLKGEQVDLLHSINSKLIVTPNTSPDVIRRAVGYQMQVCCGCATATEAFQAIEA GAQALKIFPSAAFGSDYVKALKAVLPETVPVFAVGGVTPENLHEYLNAGCVGAGLGSDLY RVGQDVQRTAQQAQAYVKAYKDAVK >gi|316917221|gb|ADCU01000025.1| GENE 56 59372 - 60520 917 382 aa, chain + ## HITS:1 COG:dgoA_2 KEGG:ns NR:ns ## COG: dgoA_2 COG4948 # Protein_GI_number: 16131560 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 382 96 477 477 677 81.0 0 MKITKLTTYRLPPRWMFLKIETDEGIVGWGEPVIEGKAKSVEAAVHELGEYIIGQDPARI NDIWQTLYRGSFYRGGPILMSAISGIDQALWDIKGKALGVPVYQLLGGLVRDKIKAYSWV GGDRPADVIDGIKKLMAGGFDTFKLNGCEEMGIIDNARKVDAAIAVVAEIRAKFGNTIEF GLDFHGRVDAPMAKILIKELEPYRPLFIEEPVLAEQAEYYPRLAAQTHLPIAAGERMYSR FDFKRVLADGGLAIVQPDLSHAGGITECFKIAAMAEAYDVALAPHCPLGPIALASCLHLD FVARNAVLQEQSMGIHYNQGAELLDYVVNKEDFNMVDGYFSPLMKPGLGVEINEEKVIAC SKNPPDWHNPVWRYSDGAVAEW >gi|316917221|gb|ADCU01000025.1| GENE 57 60753 - 62045 849 430 aa, chain + ## HITS:1 COG:dgoT KEGG:ns NR:ns ## COG: dgoT COG0477 # Protein_GI_number: 16131559 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 3 429 17 444 445 653 79.0 0 MSDITLSSAPTKRRYLTLLMIFVTVVICYVDRANLAVASAHIQAEFGISKSEMGYLFSAF AWTYTLCQIPGGRFLDRVGAKTTYFVAIMGWSIGTLFQGFANGLVSLITLRAVTGMFEAP AFPTNNRIVTSWFPEQERASAVGFYTSGQFVGLAFLTPLLIWLQEMTSWHWVFIVTGAVG ILWAALWRFVYQPPRKSKYANQAELDHIANGGGMIDGDVAAGKKMAAPLTISDWKLVFHR KLVGVYIGQFAIASTLWFFLTWFPNYLTQEKHITALTAGFMTTVPFMAAFVGVILSGVVA DKLLKSGKSIGFARKTPIICGLLLSTCIMGANYTNDPVWIMILMALAFFGNGFASITWSL ISSLAPMRLIGLTGGVFNFIGGLGGITVPLVVGYLAQYYGFAPSLTYIAVVALMGALSYI LLVGDVKRID >gi|316917221|gb|ADCU01000025.1| GENE 58 62233 - 63516 870 427 aa, chain + ## HITS:1 COG:no KEGG:YE4166 NR:ns ## KEGG: YE4166 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 6 427 11 432 433 643 71.0 0 MSRYAEKQLTFDPRGHQLTNINVWTPDSEWLAYDVRPSGSSFTGLCIERVRVADGQVDVV YRAQHGAHVGVVTVSPQQPTRYVFIHGPEHPDSHWHYDFHHRRGVIVSEPDRELAETLDA MDITEPYTAGALRGGTHVHVFSPDATRLSFTYNDHVMHEKDVALDQRNVGIALPLHAVNV PKQHPREYDGSHFCVLVSQTTPQPLAGSDQISRAYEEGWIGDEGYLKPDGTRQRWALAFI GDTVAQDGQKIPEIFVVDLPAQDSAYAEAGEYPLQGTADRLPAPPASVQQRRITFTHQRK YPGLATTPRHWLRSSPNGDEIAFLMHDDAGIVQLWTVSPNGGNPRQITHGKHSVQSALSW HPNGESLFFAMDNSIVRCSAKSGEITRLTLRSEQPPCAESVVVSPDGKKVAYMREIDGWP QLFVVNL >gi|316917221|gb|ADCU01000025.1| GENE 59 63557 - 63814 146 85 aa, chain - ## HITS:1 COG:YPO4086 KEGG:ns NR:ns ## COG: YPO4086 COG5645 # Protein_GI_number: 16124197 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Yersinia pestis # 1 80 24 104 112 87 54.0 8e-18 MTRVGPNQGYYSGAKNDVKMLKHEDTGWAMTPLLALDLPLSAVVDTLLLPYDYYRSDSNP EDESPRARVLRNEQASGVNNIAPSH >gi|316917221|gb|ADCU01000025.1| GENE 60 64245 - 64658 525 137 aa, chain + ## HITS:1 COG:YPO4085 KEGG:ns NR:ns ## COG: YPO4085 COG0071 # Protein_GI_number: 16124196 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Yersinia pestis # 1 137 1 137 137 224 83.0 3e-59 MRNFDLAPLYRSAIGFDRLFNLIESGQNQSNGGYPPYNVELVDDNHYRISIAVAGFAEHE LDITAQSNTLIVKGSHQPSDKERTYLYQGIAERNFERKFQLAEHIQIKGANLENGLLYID LERIVPETLQPRKIEIK >gi|316917221|gb|ADCU01000025.1| GENE 61 64787 - 65257 556 156 aa, chain + ## HITS:1 COG:YPO4084 KEGG:ns NR:ns ## COG: YPO4084 COG0071 # Protein_GI_number: 16124195 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Yersinia pestis # 1 150 1 152 154 224 78.0 4e-59 MRNHDLSPLLRQWIGFDKLANAMQSGLEPQGFPPYNIEKSDDNHYRISLALAGFKQSELD IEVEGPRLTVRGNPAQSEKPVEYLHQGLVCKAFDLTFTLAEHLTVDGAKFENGLLNIDLV RNVPEALQPQRIAIGGHTTPPALEQSQASDVETSNQ >gi|316917221|gb|ADCU01000025.1| GENE 62 65439 - 66722 921 427 aa, chain + ## HITS:1 COG:YPO4082 KEGG:ns NR:ns ## COG: YPO4082 COG3977 # Protein_GI_number: 16124193 # Func_class: E Amino acid transport and metabolism # Function: Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase # Organism: Yersinia pestis # 1 415 1 415 421 761 86.0 0 MTFSVFGDKFTRYAGITRLMDDLNDGLRTPGAIMLGGGNPAKIPQMTDYFTQLCADMLRE GKLTDALCNYDGPQGKDALLQALAKMLRDEFGWQIEAQNIALTNGSQSAFFYLFNLYAGR FADGSRRRVLFPLAPEYIGYADAGLDEDLFVSAKPTIELLPEGQFKYHVDFEHLNISDDV GLICVSRPTNPTGNVLTDEELIRLDAMAQQRNIPLLIDNAYGLPFPGIIFSDVNPLWNPN IILCMSLSKLGLPGSRCGIVIADEKIISAISNMNGIISLSPGSLGPAVALEMIERGDLLR LSNEVIKPFYRQRVEQTIEVLRRYLPEERCLIHKPEGAIFLWLWFVDLPISTEILYQRLK QRGVLMVPGHYFFPGLEHEWPHTHQCMRMNYVPELDQIEKGVQILAEEVERAHREDAGKK KRYVGKR >gi|316917221|gb|ADCU01000025.1| GENE 63 66787 - 67155 427 122 aa, chain - ## HITS:1 COG:no KEGG:Spro_0077 NR:ns ## KEGG: Spro_0077 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 3 122 22 137 137 119 63.0 3e-26 MKEKAEIKRLSDKLDALRRKEAGLLLQEIDTVTTHALDENRSEQEKLAAEIERLRAVQAS HFSAKAQQLLKMPFSREITKKEQADMGSLKKAVRGIEVVHPMTALGREMGLKVVTGYAKK EF >gi|316917221|gb|ADCU01000025.1| GENE 64 67271 - 67918 433 215 aa, chain - ## HITS:1 COG:ECs4477 KEGG:ns NR:ns ## COG: ECs4477 COG3722 # Protein_GI_number: 15833731 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 17 215 4 193 195 212 59.0 5e-55 MRTTAQPEIKEHLPKTEAPENPRLSEREASIMATIEEADLYKNQAFENRILERLNARQTV SGFIQATVGLLAEAVDLLIIQAFRKDDYAVKYAVEPLLEGSGPLADLPVRLKLIYALGVI SRDEYEDVELLLALNNELKHENKIYSFTDDEILGPINMLHCMTTLPPQPTLHLPEEVVDD SLANMQEQRYQQMVRSTLVLSITDLVTRLCHKKAF >gi|316917221|gb|ADCU01000025.1| GENE 65 67991 - 69148 1336 385 aa, chain - ## HITS:1 COG:YPO4067 KEGG:ns NR:ns ## COG: YPO4067 COG0246 # Protein_GI_number: 16124181 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Yersinia pestis # 1 384 1 384 387 547 72.0 1e-155 MKAIHFGAGNIGRGFIGKLLADAQAELTFADVNQPLVDQLAHQQSYQVNVVGENARVEQV NRVSAIHSNSPDAIQQIAQADIITTAVGPQVLSKIANTLAQGLIVRYNSGNHQPMNIIAC ENMVRGTSQLKQHVLLAIPAELHAWVEEHIGFVDSAVDRIVPPSAAANDDPLEVTVETFS EWIVDSTQFKGQLPQIAGMESTANLMAYVERKLFTLNTGHAITAYLGQLAGYQTIREAIL DPAIRDVVKGAMEESGAVLIKRYSFDPEQHSAYIEKILGRFENPYLHDDVERVGRQPLRK LSENDRLIKPLRGTLEYGLPNNNLLMGIAAALSYRSHQDPQAQEMAYLLNEKGITHTVKQ VCGLEDQPELVAQIANVYNAMQRQA >gi|316917221|gb|ADCU01000025.1| GENE 66 69268 - 71253 1687 661 aa, chain - ## HITS:1 COG:YPO4068_1 KEGG:ns NR:ns ## COG: YPO4068_1 COG2213 # Protein_GI_number: 16124182 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Yersinia pestis # 1 482 1 470 479 711 80.0 0 MLSPDIKVKVQNFGRFLSNMVMPNIGAFIAWGLITALFIPTGWLPNETLAKLVGPMITYL LPLLIGYTGGRLIGGERGGVVGAITTMGVIVGADMPMFMGAMIAGPLGGWAIKHFDRWVD GKIKSGFEMLVNNFSAGIIGMLLAILAFMAIGPLVESLSKILAAGVNIMVQNNLLPLTSI FVEPAKILFLNNAINHGIFSPLGIQQATETGKSIFFLIEANPGPGLGVLLAYMFFGKGSA KQSAGGAAIIHFFGGIHEIYFPYVLMNPRLILAVILGGMTGVFTLTLFNAGLVSPASPGS IFAVLLMTPKSSLVGVILSILASTLVSFLTSAMLLKRARVGDEESNGLAEATRRMQGMKQ QSKSGGKISGTQPQPVMQAVTLDLSKDLHHVRKIIVACDAGMGSSAMGAGVLRKKVKDAG LNHISVANCAINSLPDDVDLVITHQDLTERAMRHAPQAMHISLSNFLDSGLYTDLTTRLL AAKLPHAANDNRLINQTIIAANDDSFESIEREENLFKLSADNIFLNLTAENKEQAIRFAG EMLVSGGYVEPDYIDAMLAREALTTTYLGESIAVPHGTVEAKDRVLRTGIVICQYPQGVR FGDEPDDVARLVIGIAARNNEHIQVIARLTNALDDEGVIEKLAQTTSVQEILDLLSGEQA A >gi|316917221|gb|ADCU01000025.1| GENE 67 71713 - 72432 697 239 aa, chain - ## HITS:1 COG:no KEGG:ETAE_0011 NR:ns ## KEGG: ETAE_0011 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 239 1 239 239 290 66.0 4e-77 MSLAVTKQAQRWLMPIFAVIMAFQLAGCGDNDKEQRKAFIDYLQNTVMRGSITVPTLSED QKQKLGNYVSDYAILVTFSQNFSRSMDSSLNPLFTTIDQIRVPQDYLLKRDDLRQESGAL NLLGQQIQSAKSTADTARAALKQPDDVKAIYDQAFAKVVTDPANAVMPIIPMAASLSQDL IQVGDFLQSIGTQARFDNQSIQLQTQQQVDQYNQLMTSIAAKHQELLNAKNRNAAIFQN >gi|316917221|gb|ADCU01000025.1| GENE 68 72581 - 74650 2074 689 aa, chain - ## HITS:1 COG:YPO4071 KEGG:ns NR:ns ## COG: YPO4071 COG0751 # Protein_GI_number: 16124184 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Yersinia pestis # 1 689 1 689 689 1162 86.0 0 MTQQTFLVEIGTEELPPKALRSLAESFAANFTAELDNADLAHGEVTWYAAPRRLALKVAA LHESQPDREIEKRGPAIAQAFDAEGKPTKAAEGWARGCGITVDQAERLTSDKGEWLLFRA HQKGQSAQQLLPTLVTNALGKLPIPKLMRWGNNDTQFVRPVHTVTLLLGSEVIPATILGI PSDRVIRGHRFMGEPQFTIDNADQYPQILMERGKVIADYETRKAIIKRDSEQAAQKIGGI ADMSESLLEEVTSLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYDAAGKLLPN FIFVTNIESKDPQQIISGNEKVVRPRLADAEFFFKTDRKQRLEDNLPRLETVLFQQQLGT LRDKTNRIEALSGWIAEQIGADVNLATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHD GENEEVAVALNEQYQPRFAGDALPESLVACSVAIADKMDTLAGIFGIGQHPKGDKDPFAL RRAALGVLRIIVEKKLPLDLVTLTEEAARLYGQKLTNANVVDDVVDFMLGRFRAWYQEEG HSVDTIQAVLARRPTKPADFDARMKAVSHFRTLPEAAALAAANKRVSNILAKSTEVLADR VHASVLKEAAEIKLATHLVVLRDKLEPLFAEGRYQEALSELAALREPVDDFFEQVMVMAE DEQVRINRLTLLSKLRDLFLQVADISVLQ >gi|316917221|gb|ADCU01000025.1| GENE 69 74658 - 75590 888 310 aa, chain - ## HITS:1 COG:STM3656 KEGG:ns NR:ns ## COG: STM3656 COG0752 # Protein_GI_number: 16766941 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Salmonella typhimurium LT2 # 1 301 1 301 303 610 96.0 1e-175 MQKFDTKTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRALGPEPMATAYVQ PSRRPTDGRYGENPNRLQHYYQFQVVIKPSPENIQELYLGSLKELGLDPLVNDIRFVEDN WENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSV YDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFSCFEQYEKEAKMLLELEKPL PLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCK KSDDSKLENI >gi|316917221|gb|ADCU01000025.1| GENE 70 75754 - 76281 292 175 aa, chain - ## HITS:1 COG:STM0570_2 KEGG:ns NR:ns ## COG: STM0570_2 COG5571 # Protein_GI_number: 16763947 # Func_class: N Cell motility # Function: Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion # Organism: Salmonella typhimurium LT2 # 53 175 123 243 243 87 37.0 2e-17 MIKPLVIVFLMGSILLSSPALSYDLKDIFFNHDDEIVGDIVPIDRASTSIEPGFSTHWVG SNSLASAALNPTTQQQVGTLGWRLDSNLELFTPYAEISYQRLSSNESYKPAGEFSAPQSL FSRDIPNQEAHWIDVTVGANIPLSGNMAAFAELSQTNRLNNNEQFMYNIGVSANF >gi|316917221|gb|ADCU01000025.1| GENE 71 76503 - 77081 395 192 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 11 189 3 181 185 156 40 5e-37 MSQTFEDQKIRCGWVSADPLYISYHDEEWGQPVYEDAHLFELLCLEGQQAGLSWITVLKK RENYRRAFHHFDPRKVAAMTDADIDALMQDAGLIRHRLKLDAIVVNARVYMKMLQEGESF SQFLWSFTDGKPVLNRPDTLANVPAKTEVSDLMSKALKKKGFKFIGSTICYAFMQASGMV NDHVKTCFCGKC >gi|316917221|gb|ADCU01000025.1| GENE 72 77124 - 77537 453 137 aa, chain + ## HITS:1 COG:STM3643 KEGG:ns NR:ns ## COG: STM3643 COG0454 # Protein_GI_number: 16766929 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 128 14 141 146 133 53.0 9e-32 MALWLVSTTEAHPFISSHYWRESEAVVRDTYLPHALTWVAENDGEIVGFISVLEMQFIGA LFVDKRFHGKGIGPLLMQHVKMIFPQLMLEVYTENQRALRFYRHEGFEIQDTQLNEDTQH MTAIMLWEKRPGAWLED >gi|316917221|gb|ADCU01000025.1| GENE 73 77740 - 78399 213 219 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 113 214 243 344 347 86 37 7e-16 MSKSRLCIAGAVCAALLLSGCTTNPYTGESEAGKAGVGAGLGALVGAGVGVLSSSKHDRG KGALIGAAAGAALGGGAGYYMDVQESKLRDKMRGTGVSVTRQGDNIILNMPNNVTFDSSS STLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSQDLNMRLSQQRADSVASALIVQG VEASRVRTQGMGPANPIASNSTAEGKAQNRRVEITLSPM >gi|316917221|gb|ADCU01000025.1| GENE 74 78518 - 79537 864 339 aa, chain + ## HITS:1 COG:PA2259 KEGG:ns NR:ns ## COG: PA2259 COG1609 # Protein_GI_number: 15597455 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 337 6 336 340 287 45.0 2e-77 MSSQGSRATISDVAKAAKTGKTSVSRYLNGEQHLLSDDLKKRIEQAIQRLNYRPSQMARS LKGGQTRLIGMIIADITNPYSVDVLRGVEEACRVQGFTLLVCNTNNEINQEQHYLELLSS YRVEGLVVNAVGMREEALSKLQQSLLPMVLIDRKIPDFSCDMVGLDNHRAATEATQHLLE QGFEAVMFLSEPLGLVNTRLERLHAFQKAMQEHPELTACHAEVVLNKGELLDQTLTQFCH QHRGMRKAIMSANGALTLQVARSLRRLGLNWGSDIGLLGFDELEWAELAGVGITTLKQPT YQIGYAALELLVKRIQGDGQPTVEQKYPGELIVRGSTSR >gi|316917221|gb|ADCU01000025.1| GENE 75 79538 - 79789 273 83 aa, chain - ## HITS:1 COG:YPO3821 KEGG:ns NR:ns ## COG: YPO3821 COG0425 # Protein_GI_number: 16123956 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Yersinia pestis # 1 80 1 80 84 151 93.0 2e-37 MTDLFANPDKTLDALGLRCPEPVMMVRKTVRHMDDGQTLLIIADDPATTRDIPGFCRFMD HQLIAQETEQTPYRYLVRKGSAS >gi|316917221|gb|ADCU01000025.1| GENE 76 80054 - 80719 604 221 aa, chain + ## HITS:1 COG:YPO3822 KEGG:ns NR:ns ## COG: YPO3822 COG1738 # Protein_GI_number: 16123957 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 216 1 216 222 309 81.0 3e-84 MFDFTPQQRMKALCWLSVFHVLIITSSNYLVQLPISIFGFHTTWGAFTFPFIFLATDLTV RVFGAPLARRIILAVMAPALLISYCISALFFQGEWQGFAALSSFNVMVARIAVASFMAYV LGQILDVHVFNRLRQRSAWWVAPTASTLFGNISDTLAFFFIAFYHSTDPFMAANWVEIAL VDYTFKLLISLVFFLPMYGVMLNVVLKYLSTHRSEPQPQLN >gi|316917221|gb|ADCU01000025.1| GENE 77 80790 - 81248 318 152 aa, chain + ## HITS:1 COG:VC0106 KEGG:ns NR:ns ## COG: VC0106 COG0454 # Protein_GI_number: 15640138 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Vibrio cholerae # 6 145 4 143 143 130 46.0 7e-31 MPAITVKHSNIEEIHFLYSLLPEFSALHNRQDLINRLNNKETCALVAYKEEKPVGFKLGY ALNDTTFYSWLGGVLPDYRRDGIAQVLLHTQENWALNHGYQYIEVKTRNCFPAMLIMLIK NGYQLTALEQAENLADNRVRLVKCLTHGTNNK >gi|316917221|gb|ADCU01000025.1| GENE 78 81343 - 81918 565 191 aa, chain + ## HITS:1 COG:no KEGG:ETAE_0023 NR:ns ## KEGG: ETAE_0023 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 191 1 191 191 201 61.0 8e-51 MRNLVKFVGVGLLVAGLAACDGQSTDSANSAAKGSTSAEASVPAGENISLLDGKVTFTLP AGLTDQSGKLGSQSNSMHVYANKSGQQAVIVIMAPLPSDSLSTLSGRLVEQQKARDPSLN VLSDKSIEVSGQPAQEVNSVQTAKGQVSYSSIVLAKAGDQLMTMQVALPGENQQEAASIA KGVVNTLKIKE >gi|316917221|gb|ADCU01000025.1| GENE 79 81960 - 83636 1016 558 aa, chain - ## HITS:1 COG:no KEGG:EFER_3948 NR:ns ## KEGG: EFER_3948 # Name: yicH # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 1 558 1 558 569 545 48.0 1e-153 MKFIGKILLTLLAIIIALVIVAYVIAQTTWGARQISAWVNENTQYRLSLGKIHHDIREPS EVILNNVTLATDGQPPFLRAEKVSLSLGIRQFTAPKHFDSVTLENGSLSLSAPPKALLPI QAESLRLANMQLQQNDSQQKLNASQVNGYISPWQPTAGQILGNNNQFQFSAGKVLINDVP AQNVLLQGSFKQGLLTINRAGADIAQGQMTSDGVRKADGSWQINNLRLGNIHWQTNKSID AFFAPLEQLPTVTFGKVSVTDAKLEGAGWALSDLDAELDGITWSKGDWQSEKGTIAFNAN DIVVGNVHFVEPIFSADLSNAGVAIRQLSTRWEGSLLRASGNWHRNDKRLTIDDMTIVGL EYTLPQNWREIWQTPLPAWLNDVIVTKFSGSRNLLVDINPEFPFQITALDGFGSNIRLVH NRLLGLWDGQATFNASGATFNKVDLQRLSITLNANDQQIAVSELSALSQKGILEASASLN QTGRQLTLDMKGQAVPANQLVEWGWPALPLSGDVNMQLELQGVLTGEAPLKPSVNATLNV QSASGQQLTQKMVNGVVN >gi|316917221|gb|ADCU01000025.1| GENE 80 83773 - 85185 316 470 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 33 469 7 421 447 126 25 8e-28 MTTPSTEFDQVHSSTAKPATTTAPVKSELIYRLEDRPPLPQTLFAACQHLLAMFVAVITP ALLICQALGLPAQDTQHIISMSLFASGLASILQIKTWGPVGSGLLSIQGTSFNFVSPLIM GGMALKNGGADIPTMMATLFGTLMLASCTEIILSRFLHLARRIITPLVSGVVVMIIGLSL IQVGLVSIGGGYGAMNDHTFGAPSNLMLAGSVLVVIILLNRQRNPYLRVSSLVIAMAVGY ALAWATGMLPDTGNMEKTTSLLMVPTPLYYGLGIDWNLLIPLMLVFMVTSLETIGDITAT SDVSEQPVSGPLYMKRLKGGVLANGLNSMLSAVFNTFPNSCFGQNNGVIQLTGVASRYVG FVVALMLIVLGLFPAVAGFVQHIPEPVLGGATIVMFGTIAASGVRIVSREPLNRRAIMIM ALSLAVGLGVSQQPLILQFAPDWMKTLLSSGIAAGGITAIVLNLVFPHED >gi|316917221|gb|ADCU01000025.1| GENE 81 85419 - 86633 1122 404 aa, chain + ## HITS:1 COG:YPO0035 KEGG:ns NR:ns ## COG: YPO0035 COG0786 # Protein_GI_number: 16120388 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Yersinia pestis # 1 404 1 404 404 577 86.0 1e-164 MIHLDVYGTLVAATLVLLLGRQMVQKIPFLTKYTIPEPVAGGLLVALGFLLLKQTMGFEV SFDMSLKDPLMLAFFATIGLNANLASLRKGGKALSIFIFVVVGLLLVQNAIGIGMAKMLG LDPLMGLLAGSITLSGGHGTGAAWSKVFSERYGFENATEVAMACATFGLVLGGLIGGPVA RYLVKHSSTPNGTPDDTEVPTAFEKPYSGRMITSLVLIETLAMIAICLTAGHFIADFLRG TSFELPTFVCVLFVGVVLSNTMHAIGFYRVFERAVSVLGNVSLSLFLAMALMSLKLWELA SLALPMLAILLAQTLVMALYAIFVTYRVMGKNYDAAVLAAGHCGFGLGATPTAIANMQAI TDRFGPSHLAFLVVPMVGAFFIDIVNAIVIKLYLMLPVFPAVMG >gi|316917221|gb|ADCU01000025.1| GENE 82 86688 - 88769 1803 693 aa, chain - ## HITS:1 COG:YPO0036 KEGG:ns NR:ns ## COG: YPO0036 COG1200 # Protein_GI_number: 16120389 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Yersinia pestis # 1 693 1 693 693 1108 83.0 0 MKGRLLDAIALTSLAGVGASQAGKLAKIGLENIQDLLLHLPLRYEDRTRLYAIKDLLPGL FATVEGEVLRTDISFGRRRMMTSQISDGTGMLTMRFFNFNAAMKNSLSPGKHVLAYGEIK RGNLGAEIIHPEYKIQGETENVELQEALTPVYPTTEGIRQATLRKLTDQALSLLDTVPIA ELLPDELRRGLMSLPDALRMLHRPPPHMQLADLEHGKHPAQRRLILEELLAHNLSMLAVR AGAQSHKALSLSADDRLKNLMLASLPFKPTAAQERVVADIEADMAKPVPMMRLVQGDVGS GKTLVAALAALRTIAHGKQVALMAPTELLAEQHANNFRQWFEPLGLKVGWLAGKQKGKAR QTQMEAIASGEVDMIVGTHAIFQDQVQFSGLALVIIDEQHRFGVHQRLALWEKGEEQGFH PHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDSRRTDIIERVKNACL KEGRQAYWVCTLIEESEMLEAQAAEATAEELKLLLPEIKVALVHGRMKAAEKQEVMRAFK AGETQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKT PLSQTAQKRLQVLRDSNDGFVIAQRDLEIRGPGELLGTKQTGSAEFKVADLLRDQALIPE VQRIARHIHQNYPEHAQALIERWLPERSRYTNA >gi|316917221|gb|ADCU01000025.1| GENE 83 88772 - 89464 576 230 aa, chain - ## HITS:1 COG:STM3743 KEGG:ns NR:ns ## COG: STM3743 COG0566 # Protein_GI_number: 16767028 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Salmonella typhimurium LT2 # 1 227 1 227 229 353 79.0 1e-97 MTPQRYARICQMLATRQPDLTVCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPGKTMRTM VSTAAGSNSWVSVKTHPDISSAVSTLKAEGMQILATNLSSTAVDFREIDYTRPTCILMGQ EKYGITAEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYQREHSPLSD EDQQRLLWEGGYPVLANVAKRKKLPRPRIDDEGQIDAPQAWWDAMQATKG >gi|316917221|gb|ADCU01000025.1| GENE 84 89469 - 91568 1672 699 aa, chain - ## HITS:1 COG:YPO0038 KEGG:ns NR:ns ## COG: YPO0038 COG0317 # Protein_GI_number: 16120391 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Yersinia pestis # 1 699 1 702 702 1320 93.0 0 MYLFESLNLLIQKYLPEEQIKRLKQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMR LDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFR KMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHLKT ELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLTEAGIECHVNGREKHL YSIYRKMHLKEQRFHSIMDIYAFRVIVKDVDTCYRVLGQAHSLYKPRPGRVKDYIAIPKA NGYQSLHTSLIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEGESSTTAQIRAQRWMQS LLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHAC VGARVDRQPYPLSQALHSGQNVEIITAPGARPNAAWLNFVVSSKARAKIRQMLKNLKRDD SVSLGRRLLNHALGNGRKLSDLPPENIQRELDRMKLHSMDDLLAEVGLGNAMSVVVAKNL LGDPQQTGTSTGRKLPIKGADGVLLTFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIR GYQKEPEKFMAVEWDKDIEQEFIAEIKVDMFNHQGALANLTAAINATASNIQSMNTEEKD GRVYSAFIRLTTRDRVHLANIMRKIRIMPDVIKVNRNRN >gi|316917221|gb|ADCU01000025.1| GENE 85 91588 - 91863 467 91 aa, chain - ## HITS:1 COG:ECs4524 KEGG:ns NR:ns ## COG: ECs4524 COG1758 # Protein_GI_number: 15833778 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Escherichia coli O157:H7 # 1 91 1 91 91 110 96.0 6e-25 MARVTVQDAVEKIGNRFDLVLVAARRARQMQSGGKDPLVPEENDKYTVIALREIEEGLIN NQILDVRERQEQQEQEAAEIQAVTAIAEGRR >gi|316917221|gb|ADCU01000025.1| GENE 86 91918 - 92541 587 207 aa, chain - ## HITS:1 COG:YPO0040 KEGG:ns NR:ns ## COG: YPO0040 COG0194 # Protein_GI_number: 16120393 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Yersinia pestis # 1 207 1 207 207 358 88.0 5e-99 MVQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSISHTTRAKRPGENHAEHYYFVSHD EFRQMIEEDAFLEYAEVFGNYYGTSRKAIEQILSTGVDVFLDIDWQGAQQIRKKMPQSRS IFILPPSKDELDRRLRGRGQDSDEVIAKRMAQAVAEMTHYAEYDYLIVNDDFDLALSDLK TIIRAERLRLGRQKMRHDALITKLLAD >gi|316917221|gb|ADCU01000025.1| GENE 87 92813 - 94546 583 577 aa, chain + ## HITS:1 COG:YPO0041 KEGG:ns NR:ns ## COG: YPO0041 COG0272 # Protein_GI_number: 16120394 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Yersinia pestis # 20 511 23 515 567 426 43.0 1e-119 MAWNILMVLVAWLISSLCRSWAQPPCPDWAAERATHEISALQQQMAKWDEAYFLQGSSPV SDEIYDQMAQRLKSWKQCFLTNSSSSNSALEPTSPRNTLSHPVAHTGLNKLENEAAVRDW LKGKESVWIQPKIDGVAVTLHYQHGRLKSMISRGDGLIGQDWTKASASISAIPKKIPDDE AYTVLQGELFLKVTDHQQKRDGGINARSKVAGAMRLKFLSSETANQLEIFIWGYPDGPAE MPQRLNKLARLGFPLAEQYTHAVTDVVDVEKWREYWYQQPLPFVTDGIVLHMAQQPASVL WRPSPPGWAAAWKYPLKSSVTEVKDVQFSIGRSGRINAVLLLEPVTVDDKRVSRVSLGSV MRWQQWDVQPHDQVSVVLAGQGTPHLEKVIWRSPERVIVNAPDRGKYHSLSCWHYAPGCE QQFIARVVWMAQSLGITGVGEAFWRELAQSGELSDLDDVLALTEHRLVSRGMGINRAQRL SAAIERIKLVPSGAWLRALGMPSTLADCGWEYTGCKLSVTQNKQYRQIWQDKEWLGLMER LRLQGVAAFNPFSVSDLAADSQIPVVPNGSAVPVDER >gi|316917221|gb|ADCU01000025.1| GENE 88 94473 - 95090 686 205 aa, chain - ## HITS:1 COG:ECs4521 KEGG:ns NR:ns ## COG: ECs4521 COG2860 # Protein_GI_number: 15833775 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 205 19 223 223 249 74.0 3e-66 MLLSILYIVGITAEAMTGALAAGRRQMDMFGVIIIASATAIGGGSVRDMLLGHYPLSWVK HPENIVIVAVAAIVTTWAAPLMTHLRKLFLVLDAVGLVVFSIIGAQVALEMGHGPIIASI AAVVTGVFGGVLRDLFCNRIPLVFQKELYAGISFAAAWLYMGLLYIAIPQDLTVMITLFA GFTARLLALRFRLGLPVFDYQQPDH >gi|316917221|gb|ADCU01000025.1| GENE 89 95291 - 96223 709 310 aa, chain - ## HITS:1 COG:RSp0910 KEGG:ns NR:ns ## COG: RSp0910 COG0583 # Protein_GI_number: 17549131 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 11 308 6 305 309 223 38.0 3e-58 MQAFNELSIKSLRLFVAVIDYGSFSAVARNEGIAPSSISRQMQQMEQALNQQLLYRHTRA VTATESGRLLATYARRVLEQLEEAEQALQEKKLEPAGLVRINAPVVFGRLHIAPYIPELC HKHPKLCVELVQTDNFIDPMQDASDLLFRIGILSDSNLQGRVLAQQNYRIAASPEYLRRF GVPSSPEELEHHNCLVFKGFAGAQRWFFQCKNQWVPYNLHGSLTGNNADSLLDAAIQGLG IVVFPTWLLGDALKDGRLVSLMEKYPVSTRLEPQQLAALYPQSRRLPLKVRVVIDFFVQK FGTPAYWDNI >gi|316917221|gb|ADCU01000025.1| GENE 90 96338 - 97207 763 289 aa, chain - ## HITS:1 COG:PA2199 KEGG:ns NR:ns ## COG: PA2199 COG2084 # Protein_GI_number: 15597395 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Pseudomonas aeruginosa # 1 287 1 289 291 283 50.0 3e-76 MKIAFLGLGSMGQPMAQNLLKAGYEVKVWNRSAAAVEPLVANGASSCKTPADIAECEMVI SMLADDHITHDVMVTQGALSALDKNAVYINMATVSNDLTREMTAYCAERGLHYIAAPVLG RVDVAAAGNLNILAAGEPEQLARALFDVLGQKTWHFGDKPEQASTVKLAANFMLATVIES VGESTALVKAHGIEPKNFIDMLTSTLFSAPVYKNYGGMIAEERYTPAGFKLTLGLKDVRL AQQAAEEKNVPMPFASVLRDNFIDAIAQGDGNLDWSALANVSARRSGLK >gi|316917221|gb|ADCU01000025.1| GENE 91 97431 - 97907 440 158 aa, chain + ## HITS:1 COG:all7167 KEGG:ns NR:ns ## COG: all7167 COG3238 # Protein_GI_number: 17233183 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Nostoc sp. PCC 7120 # 17 155 34 174 177 61 29.0 6e-10 MTASGLCEPGSIKRAGYIPLVIMAGMGLSVEAGLLGPLGEEVGHLWATLSIFGVGAALLF LLSLLTGKPSEHRPFSTLPRWQLIGGLLGPVYVIMLTLATPIIGVAMTMIAILSGQVAKS LLIDHFGWFGIPRKRVGIQRLFALALIVAALVLIAEGA >gi|316917221|gb|ADCU01000025.1| GENE 92 97911 - 98378 301 155 aa, chain + ## HITS:1 COG:all7167 KEGG:ns NR:ns ## COG: all7167 COG3238 # Protein_GI_number: 17233183 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Nostoc sp. PCC 7120 # 10 143 37 173 177 60 29.0 9e-10 MFSHIVMLALVVIAGAVLSMQAAINGRLGESVGVIRSSQLTFVVGAVLSGLLIFFFEPPH TQTLLTVPKWQLAGALFGMFYMLVMVASVPKVGVATATVAVICGQLSMGMMIDTFGWFGN QAIGFSMSRMAALICLALALVLIYRSNREEEQSVV >gi|316917221|gb|ADCU01000025.1| GENE 93 98463 - 99326 1051 287 aa, chain - ## HITS:1 COG:YPO0043 KEGG:ns NR:ns ## COG: YPO0043 COG1561 # Protein_GI_number: 16120396 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Yersinia pestis # 1 287 1 287 287 409 87.0 1e-114 MIRSMTAYARREIKGNWGSAAWELRSVNQRYLETYIRLPEQFRSLEPVVRERLRTRLTRG KIECNLRFELDPSAQSSMILNEKLAKQLVEAANWVKMQSDEGEINPLEVLRWPGVMSAAE QDLDVISTELMAALELAIDDFIDAREREGNALKAMIEQRLEGVSAEVAKVRQQMPEILQW QRERLVSKLEEAQVQLENNRLEQELVLMAQRVDVAEELDRLEAHVKETYVILKKKEAVGR RLDFMMQEFNRESNTLASKSINADVTASAIELKVLIEQMREQIQNIE >gi|316917221|gb|ADCU01000025.1| GENE 94 99531 - 100247 755 238 aa, chain + ## HITS:1 COG:YPO0044 KEGG:ns NR:ns ## COG: YPO0044 COG0689 # Protein_GI_number: 16120397 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Yersinia pestis # 1 238 1 238 238 380 88.0 1e-105 MRPEGRTAEQIRPLKLTRHYTKHAEGSVLVEFGETKVLCNATVEEGVPRFLKGQGQGWVT AEYGMLPRSTHSRMAREAAKGKQGGRTMEIQRLIARSLRAAVDLKKLGEFTITLDCDVIQ ADGGTRTASITGACVALADALNALVAAGKLKANPMKGMVAAVSVGIVDGQAVCDLEYVED SAAETDMNVVMLEDGRMIEVQGTAEGEPFSHEELLQLLALARGGIDKIIQAQKAALEN >gi|316917221|gb|ADCU01000025.1| GENE 95 100358 - 100999 714 213 aa, chain + ## HITS:1 COG:STM3733 KEGG:ns NR:ns ## COG: STM3733 COG0461 # Protein_GI_number: 16767018 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Salmonella typhimurium LT2 # 1 213 1 213 213 388 91.0 1e-108 MKAYQRQFIEFALSKQVLKFGEFTLKSGRTSPYFFNAGLFNTGRDLALLGRFYAEALVDS GIEFDLLFGPAYKGIPIATTTAVALAEHHDRDLPYCFNRKEAKSHGEGGTLVGSPLVGKV MLVDDVITAGTAIRESMEIIQAHNAQLAGVLISLDRQERGRAEISAIQEVERDYGCKVIS IITLKDLISYLEEQPDMAKSLASVKAYREEYGV >gi|316917221|gb|ADCU01000025.1| GENE 96 101064 - 101660 422 198 aa, chain - ## HITS:1 COG:YPO0046 KEGG:ns NR:ns ## COG: YPO0046 COG1309 # Protein_GI_number: 16120399 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 198 1 198 198 306 91.0 2e-83 MAEKENTKRNRREEILQALAQMLESSDGSQRITTAKLAANVGVSEAALYRHFPSKTRMFD SLIEFIEDSLITRINLILQDEKETFNRLRLILLLILGFAERNPGLTRIMTGHALMFEQDR LQGRINQLFERIEAQIRQVLKERKIREGQGFAHDETLLAGQLLAFCEGMLSRFVRSEFRY RPTQEFDLRWPLLASQLQ >gi|316917221|gb|ADCU01000025.1| GENE 97 101761 - 102219 403 152 aa, chain - ## HITS:1 COG:STM3731 KEGG:ns NR:ns ## COG: STM3731 COG0756 # Protein_GI_number: 16767016 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Salmonella typhimurium LT2 # 3 152 2 151 151 262 85.0 1e-70 MKKKIDVKILDPRIGEQFPLPTYATPGSAGLDLRACLDEAVILAPGETTLLPTGLAIHIE DPSLAAIILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMVSVWNRGQTTFTIEPGERVAQM VLVPVVQADFNLVESFEDSERGAGGFGHSGRQ >gi|316917221|gb|ADCU01000025.1| GENE 98 102197 - 103411 846 404 aa, chain - ## HITS:1 COG:YPO0048 KEGG:ns NR:ns ## COG: YPO0048 COG0452 # Protein_GI_number: 16120401 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Yersinia pestis # 1 403 2 404 405 605 75.0 1e-173 MTALTGKRIVLGISGGIAAYKCPEIVRRLRERGAEVRVVMTKGAEAFITPLTLQAVSGYP VSDDLLDPAAEASMGHIELGKWADLVVLAPATADLIARIAAGMANDLLSTVCLATAAPIA VAPAMNQQMYRAAATQENLNTLERRGLLLWGPDSGSQACGDVGPGRMLDPMVLVGMIQEH FAQQQDLTQYSFLISAGPTREALDPVRFITNHSSGKMGFSIAAAAAKRGAKVTLVSGPVN QKTPAGVARIDVESALEMKNAVLTQVPAHQIFISCAAVADYRAEQICDEKIKKQGDEITL KLVKNPDIVASVAALKEHRPYVVGFAAETQNVEEYAKQKLARKNLDMICANDVSQAGQGF NTDTNALHLFWPQGDKPLPLSNKSLLGHYLIDEIVSHYEEKNRR >gi|316917221|gb|ADCU01000025.1| GENE 99 103734 - 104279 248 181 aa, chain + ## HITS:1 COG:YPO0049 KEGG:ns NR:ns ## COG: YPO0049 COG2003 # Protein_GI_number: 16120402 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Yersinia pestis # 1 181 42 222 222 230 60.0 1e-60 MALSSQLIREFGSIYALMQADYDIFCTKPGLGISRYAQLQAVMELSKRFLHRQLTEQSVI TRPELTALYLQNVFSGYEREAFFVLFLDNQHRVIRSEEMFSGTINCVDVYPREIVRGALK VNAVALILAHNHPSGIAEPSAADRVLTERVVKACALLDIRVLDHMVIGHGQSVSFAERGW L >gi|316917221|gb|ADCU01000025.1| GENE 100 104518 - 104754 401 78 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|123440464|ref|YP_001004458.1| 50S ribosomal protein L28 [Yersinia enterocolitica subsp. enterocolitica 8081] # 1 78 1 78 78 159 98 1e-37 MSRVCQVTGKRPVAGNNRSHAMNATKRRFLPNLHSHRFWVEGEKRFVTLRVSAKGMRVID KKGIETVLAEIRARGEKY >gi|316917221|gb|ADCU01000025.1| GENE 101 104766 - 104933 280 55 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804177|ref|NP_290216.1| 50S ribosomal protein L33 [Escherichia coli O157:H7 EDL933] # 1 55 1 55 55 112 100 1e-23 MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK >gi|316917221|gb|ADCU01000025.1| GENE 102 105051 - 105860 582 269 aa, chain + ## HITS:1 COG:YPO0052 KEGG:ns NR:ns ## COG: YPO0052 COG0266 # Protein_GI_number: 16120405 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Yersinia pestis # 1 268 1 268 269 433 76.0 1e-121 MPELPEVETSRRGIEPYLVGNSIEHLVVRQPKLRWPVSDELLRLSDKPVLSVQRRAKYLL IELADGWIIVHLGMSGSVRILPADEPPQKHDHVDMILSSGMMLRYTDPRRFGAWLWCKDL DSSNVLAHLGPEPLSDEFNGDYLFRKSRSKKTAVKAWLMDNKVVVGVGNIYASESLFTAR ISPDRPAGDLTQADAEVLVATIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRA GEACRVCGEKILSGKHGQRTTFFCPRCQK >gi|316917221|gb|ADCU01000025.1| GENE 103 105864 - 106343 377 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 2 159 3 160 164 149 45 6e-35 MEKRAIYPGTFDPMTNGHLDLVTRAASMFDHVILAIAASPSKKPMFTLEERVALATQVTA HLPNVEVLGFSELMAHFAQHQNAHILVRGLRAVSDFEYEMQLANMNRHLMPTLESVFLMP SKEWSFISSSLVKEVARHGGDIAPFVPEQIAQALGEKLA >gi|316917221|gb|ADCU01000025.1| GENE 104 106355 - 107566 748 403 aa, chain - ## HITS:1 COG:YPO0055 KEGG:ns NR:ns ## COG: YPO0055 COG1519 # Protein_GI_number: 16120408 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Yersinia pestis # 1 403 23 425 425 688 83.0 0 MRGRKAPAYRKRWAERYGFCSNKMLSGGIMLHSVSVGETLAAIPLVRALRHRYPTLPITV TTMTPTGSERVQSAFGKDVQHVYLPYDLPGSINRFLDRVNPKLVLIMETELWPNLITALN KRQIPLVIANARLSARSAKGYAKLGGFIRDILRRITLIAAQNQEDGERFISLGLKPSQLA VTGSLKFDISVTPQLAAKAVTLRRQWAPHRQVWIATSTHEGEEDILIEAHKQLLKHFPEL LLILVPRHPERFNDAIELTQQAGLSYITRSSGEIPSTKTQVVIGDTMGELMLLYGIADLA FVGGSLVERGGHNPLEPAAHAIPVLMGPHTINFKDICARLEQADGLITVTDAASLVKEVT TLLTDEDYRNYYGRHAVEVLYQNQGALQKLLHLLEPYLPVKTH >gi|316917221|gb|ADCU01000025.1| GENE 105 108123 - 109145 214 340 aa, chain + ## HITS:1 COG:STM3723 KEGG:ns NR:ns ## COG: STM3723 COG0859 # Protein_GI_number: 16767008 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Salmonella typhimurium LT2 # 1 326 7 331 344 464 67.0 1e-130 MLLTTPVISTLKQNYPDAQIDVLLYEDTMPILSENPEINALYGIKNRKTPTLERLKNVFA TIGVLRKNHYDLVVNLTDQWPVAFLVRCLQTKNKISLQFQHRRSVLWTSCFRESVPPQGS HIVERNLSTLAPLGLKKVVTETTMGYQPEHWNNIQNKLSELGVDSHRYVVIQPTARQVFK CWDEEKFSAVIDSLEARGYRVVLTSGPSAGDITCVNKIKNHCQNKPVTELAGKTSFPELA ALIDHAALFIGVDSAPMHISAALKTPIICLFGATDHRFWRPWSDNFIMFWAGDYQPMPKR EDLDRHHKYLSCIPASEVIEATEKLLKSSSNESMSRNGSL >gi|316917221|gb|ADCU01000025.1| GENE 106 109142 - 110266 657 374 aa, chain + ## HITS:1 COG:rfaG KEGG:ns NR:ns ## COG: rfaG COG0438 # Protein_GI_number: 16131502 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli K12 # 1 371 1 371 374 518 64.0 1e-147 MNIAFCLYKYFPYGGLQRDFLRIALACQARGHHIRVYAMSWEGERPEQFEYIQVPTSAHT NHGRNKEYSDWVSQELQRNPADVIVGFNKMPGLDYYYAADVCYAEKVEQEKGFLYRLTSR YKHYAEFERAVFSNDSRTELLMLTGKQIADFKKHYQTKPERFHIVPPGISLDRKYDYRPA NAREDFRQRNHTEQDELLILQVGSDFKRKGVDRTLRAVAALPAEIKAKTKLIVVGQDKPK RYQALAEKLGIASQVAFYSGRDDIPELMAAADILMHPAYQESAGIVLIEAIAAGLPVITT ETCGYAHHVASAECGVVISEPFEQNALNGALARGLGNKQLRATWSEHAKKYADSEDLYSL PERAADLILGGKND >gi|316917221|gb|ADCU01000025.1| GENE 107 110259 - 111056 437 265 aa, chain + ## HITS:1 COG:no KEGG:c4454 NR:ns ## KEGG: c4454 # Name: rfaP # Def: lipopolysaccharide core biosynthesis protein RfaP # Organism: E.coli_CFT073 # Pathway: Lipopolysaccharide biosynthesis [PATH:ecc00540]; Metabolic pathways [PATH:ecc01100] # 1 265 4 268 268 412 73.0 1e-114 MIELKEPLTTLWKGKDPFVEVEKLQGEVFRALETRRTLRFSLADKSYFIKIHYGTTLKEV LKNLISFRIPVLGADREWKAIHRLYQLDVDTMTGVGFGQTGINPLTRKSFIITEDLAPTI SLEDYCADWAQNPPDFGIKRMLIKRLATMVRKMHRGGVNHRDCYICHFLLHLPFNGEESQ LKLSVIDLHRSQIRSHVPKRWRDKDLIGLYFSSSNIGLSKKDILYFLKIYFDAPLRTILV QEKALLEKAIVKSERIKERTIRKSL >gi|316917221|gb|ADCU01000025.1| GENE 108 111096 - 112103 224 335 aa, chain + ## HITS:1 COG:rfaI KEGG:ns NR:ns ## COG: rfaI COG1442 # Protein_GI_number: 16131498 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Escherichia coli K12 # 1 333 4 337 339 341 51.0 1e-93 MFFNEEQYIKEVITYSGNNGCDNSHSLNIAYGTDKNFLFGCAVSITSILIENKDLDFSFH VFTDSFTEDDRTKFKALSEQYKTNISIYLVNAANLKSLPENKLWTYAIYFRFIIADYFSD KLERIVYVDSDVVCNGSIRDLSTLSLDGVVAAGVTERDESWWRQRAETLGDRQIANGYFN TGVLVINVPEWKRLDVSTLAMKSLNDQNIRSKLTYYDQDVLNMVLAGRVLFLDKIYNTQF SLNYELKKNCENPITESTVFIHYIGPTKPWHEWAQYPSATPFYQAKKRSPWDTVPLMKPK SSSQFRYCAKHKFNQHKSFEGIYFYFMYFIKKMLG >gi|316917221|gb|ADCU01000025.1| GENE 109 112132 - 112857 441 241 aa, chain + ## HITS:1 COG:no KEGG:B21_03433 NR:ns ## KEGG: B21_03433 # Name: ybl155 # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: Lipopolysaccharide biosynthesis [PATH:ebl00540]; Metabolic pathways [PATH:ebl01100] # 1 229 1 229 230 275 62.0 8e-73 MIVSKNIKNFKVYIKDNNEIYENIFRDFLNNNLDVIKVFRSIEDTKVSLINTPHGKFVFK VFAPKEKKAERFFKSFVKGDYYLNLLLQTDRVRNEGVTFPNDFYLLAEKKIFNYASVFIM LIEFVDGVELSDVQDFDENIRTEIQSKMIELHQHNMVSGDPHKGNFILSQDGVRIIDLSG KACNAKRKAKDRIDMERHLNIRNTVNDFAYFSVIYRNNLRQKIKAIKAKVKMFLGLKKRK V >gi|316917221|gb|ADCU01000025.1| GENE 110 113278 - 113646 68 122 aa, chain + ## HITS:1 COG:no KEGG:ROD_41931 NR:ns ## KEGG: ROD_41931 # Name: rfaZ, waaZ # Def: lipopolysaccharide core biosynthesis protein RfaZ # Organism: C.rodentium # Pathway: not_defined # 2 119 139 255 269 167 70.0 9e-41 MRNKNILIDVPVSKRRRLVGFSLDISDGYCSCHTVAYAAIQIAYSLRYTKIICSGLDLVD SCSRFYDKNGEPSMPSELSRDLGKIIPFFIFMKDNVKDINIYNLSNNTAIDYKIIPYLDV NN >gi|316917221|gb|ADCU01000025.1| GENE 111 113824 - 114861 197 345 aa, chain + ## HITS:1 COG:rfaK KEGG:ns NR:ns ## COG: rfaK COG0859 # Protein_GI_number: 16131494 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli K12 # 1 317 46 356 357 170 31.0 3e-42 MRDNNKLGDMIIFTPLFRECHRLGLEVSVVTGAVCAELIKENKNIKHIFVCKEKFFNMFS LALKLRKKKYDLVIDPLNEVHSYRSIMMMQVINPKHILGFNKAGKYKTYDISLPEDLSLN RHTSERTKSILRLLKPNIDLDEVDMSYDLPIPKDADAIVRQYLERFSGRTTVLLNPFGAL KTRKFSTAKINAIVDIIKQKIENPVIIISGLESEIKHIEIDGVEKTPFTRYIHATSLVKQ VDYIVSVDTSIVHAATAFNKPIVAFYPMSKTQINSQPSTWGPNSEYAIQILSDTRNVEDI PDDKIKCAIENMLSMRKLKNGPTGPFFYINSLRSIFLRVRREECR >gi|316917221|gb|ADCU01000025.1| GENE 112 114809 - 115915 692 368 aa, chain - ## HITS:1 COG:STM3713 KEGG:ns NR:ns ## COG: STM3713 COG3307 # Protein_GI_number: 16766998 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Salmonella typhimurium LT2 # 1 362 40 404 404 270 41.0 4e-72 MISAAIYITGLVYIIQQRKKIFSILKNNLFLSLAIFTVAMIYAITISVEPSLSLKRASNS IFEKLFLVSIMIAMVLHREDNKKIAHMLVLALATTLVILTGTELHQYIEEYKVGIIPFTS FEHRRISDTLIFIFPAILTLWTIPGAKYKTIFFVLAAIFAILMLGTLQRGTWLSLLVPAL IWAIAKREWKLPLLAALVIGVGLFTVHQKDPQQVKTLFHKLQQTDSSGRYENGTQGAALD LILENPIKGYGFGNDLYHHVYNKRSPSYPDWRFKESIGPHNLTLSIWFAGGVIGVAALYY LLASALVSSIKGYRENNGPAQDAFLILTLILIGDFIVRGAFETVRIENIAVIIGILLALH AKKYYVEN >gi|316917221|gb|ADCU01000025.1| GENE 113 116061 - 116993 528 310 aa, chain - ## HITS:1 COG:YPO0056 KEGG:ns NR:ns ## COG: YPO0056 COG0859 # Protein_GI_number: 16120409 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Yersinia pestis # 1 306 11 316 321 513 79.0 1e-145 MGDVLHTLPALTDAMHAIPDIKFDWVVEEGFAQIPSWHPAVDRVIPVAIRRWRKNWFGAA TRQERCDFKREVQRRTYDAVIDAQGLIKSAALITRIAKGPRHGQDCQSAREPFASWFFNH RYNISKKMHAVERTRELFAVSLGYTKPQSRGNYAIAQRFLEHLPADHGSYLVFLHATTRD DKHWPEEHWRELIALVEPTGIKIKLPWGAEHEHQRALRLAEGFGHVEVLPRLSLEQVAEV LAGAKAVVSVDTGLSHLAAALDRPNITLYGPTDPGLIGGYGENQVACCSQDKSLANLAAS TVFSSLAKNL >gi|316917221|gb|ADCU01000025.1| GENE 114 117023 - 118072 848 349 aa, chain - ## HITS:1 COG:YPO0057 KEGG:ns NR:ns ## COG: YPO0057 COG0859 # Protein_GI_number: 16120410 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Yersinia pestis # 1 343 1 343 354 556 78.0 1e-158 MKILVIGPSWVGDMMMSQSLYRTLKAEHPDAKIDVMAPNWCRPLLARMPEVNEAIAMPLG HGALALGERYRLGKSLRDSNYDRAYVLPNSFKSALVPFFARIPVRTGWKGEMRYGLLTDV RQLDKAAFPLMVERYVALAYPSQQIKSAKDLPQPLLWPALSVADEEIAETAAAFNLTDHR PIIGFCPGAEFGPAKRWPHYHYAALAQKLIDQGYQIALFGSAKDHEAGEEICHALTEDAR EYCLNVAGQTNLDQAVILIAACQAIVTNDSGLMHVAAALNKPLVALYGPSSPDFTPPLSD KAKVIRLITGYLKIRKGDANQGYHQSLIDIQPDAVMQALNELLPKDTQL >gi|316917221|gb|ADCU01000025.1| GENE 115 118107 - 119036 966 309 aa, chain - ## HITS:1 COG:YPO0058 KEGG:ns NR:ns ## COG: YPO0058 COG0451 # Protein_GI_number: 16120411 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Yersinia pestis # 1 307 1 308 310 546 85.0 1e-155 MIIVTGGAGMIGSNIVKALNNIGYSDILVVDNLKDGTKFVNLVDLEITDYMDKEDFIASV VAGDDFGDIDAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHFCLERQIPFLYASSAATY GLTEQFTEEREFEGPLNVYGYSKFLFDQYVRQILPQAESQICGFRYFNVYGPREGHKGSM ASVAFHLNNQINNGEDPKLFEGSDGFKRDFIYVGDVADVNLWFWQKGISGIFNCGTGRAE SFQAVADAVVAYHQKGSISYIPFPDKLKGRYQGFTKADTTKLRAAGYDKPFKTVAEGVSE YLAWLNKKA >gi|316917221|gb|ADCU01000025.1| GENE 116 119347 - 120543 1026 398 aa, chain + ## HITS:1 COG:YPO0059 KEGG:ns NR:ns ## COG: YPO0059 COG0156 # Protein_GI_number: 16120412 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Yersinia pestis # 5 398 10 403 403 700 87.0 0 MSADFYQQLTQQLETTRAEGLYKNERIITSAQQADIAVADGRHVINFCANNYLGLANHPA LIEAAKKGMDSHGFGMASVRFICGTQDSHKQLEQRLAEFLGMEDSILYSSCFDANGGLFE TLLGPEDAIISDALNHASIIDGVRLCKAKRYRYANNDMTELRAQLEMAKADGARHILIAT DGVFSMDGVIADLKSVCDLADEYGALVMVDDSHAVGFVGENGRGTHEYCEVMGRVDIITG TLGKALGGASGGYTAGRKEVIEWLRQRSRPYLFSNSLAPAIVAASIKVLELLADGDELRN RLWSNARLFREKMSAAGFTLAGADHAIIPVMLGDAKLAQEFANELLKEGIYVTGFFFPVV PKGQARIRTQMSADHTPEQIERAVAAFIRIGKQLGVIA >gi|316917221|gb|ADCU01000025.1| GENE 117 120557 - 121582 1041 341 aa, chain + ## HITS:1 COG:YPO0060 KEGG:ns NR:ns ## COG: YPO0060 COG1063 # Protein_GI_number: 16120413 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Yersinia pestis # 1 341 1 341 341 675 92.0 0 MKALSKLKAEEGIWMTDVPKPELGHNDIMIKIRKTAICGTDVHIYNWDEWSQKTIPVPMV VGHEYVGEIVAIGQEVKGYKIGERVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNRTGA FAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGIMAA AVCKHVGARNVVITDVNEYRLELARKMGVTRAVNVSKENLTDVMSELGMTEGFDVGLEMS GAPPAFRAMLSTMNHGGKIAMLGIPPSDMAIDWNQVIFKGLFIKGIYGREMFETWYKMAA LLQSGLDLSPIITHRFGIDDFQKGFDAMRSGQSGKVVLSWD >gi|316917221|gb|ADCU01000025.1| GENE 118 121655 - 123187 674 510 aa, chain - ## HITS:1 COG:yhbX KEGG:ns NR:ns ## COG: yhbX COG2194 # Protein_GI_number: 16131064 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 6 507 42 544 547 508 49.0 1e-144 MAPNIHMSYRIVTFTLSLLFLKAIRSSPLRLILAIPFLFLCSADISLSLYSWFTFKTPFN DGFAVSTLESNPSEMIAMLGVYLRFVIVCLALLVLFIFAVRPIPGKMPSKKITGTLILII CLIALVSSLKFVKKRPVNEGAISELKVAARFTTYMPFFNISYFLTAMQESQILKNISGAT PHYTLTVKDTGIDTYVLIIGESERARNMSIYGYKKPTTPQLESQKPYLKLFTQAISGVPF TSVAVPMALSADNIHNHDLKNYADNVINLANQAGFHTTWLSAQTAFGNYGSSVAGIAMNA KDKLYIKGYDKELIPHLKTALAKPGHDKKLIILHLYGSHEPACARYPSNEAIFDKNGDID ACYDNSVLYTDSLFGEIFSLLKQKNASVFYFSDHALERDPKQSAPYFHGGITPSQEAYHV PMFIWYSPVLEPRYQQEIGQVDSVYSTSYNDAAIATWLGITDASRGIFSNVNDVVNKFKN DSTVLDNLYQKLDYHSLRKTAQEPLPESSR >gi|316917221|gb|ADCU01000025.1| GENE 119 123353 - 124270 395 305 aa, chain - ## HITS:1 COG:STM3706 KEGG:ns NR:ns ## COG: STM3706 COG2861 # Protein_GI_number: 16766991 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 11 304 11 306 320 379 67.0 1e-105 MRFFNAVTSALFIFICSAASAYAGKLAIVIDDFGYRPQEENKILQMPLAISVAVLPTAPH AREMATKAHAQGREILIHLPMAPISKQPLEKDTLQPSMSEAEIQRIIHQAVNSVPYAVGM NNHMGSLMTSNLQGMQKVMRTLEQYHFLYFLDSMTIGNSQVTNASAGTGIKVIKRRVFLD DSQNEASIRQQFNRAIQIARKNGSAIAIGHPHPSTVRVLQQMLPSLPADIVLVRPSSLLN GASVPDKKPAPTQQKPRNPFRGVKQCITKKAPEKVYATAMFDAISSSLANSAPIKFIQDR WQYWH >gi|316917221|gb|ADCU01000025.1| GENE 120 124330 - 125691 1208 453 aa, chain - ## HITS:1 COG:YPO0063 KEGG:ns NR:ns ## COG: YPO0063 COG4942 # Protein_GI_number: 16120414 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Membrane-bound metallopeptidase # Organism: Yersinia pestis # 29 453 25 450 450 456 69.0 1e-128 MRGKDQFHESKVALALKTGKNIGDKQTCLSPLPTALRMLPILCASFIYAGAWFSSFPAIA ADDNKQQLKSIQQDIAEKEKAVKQQQQQRSSLQDQLKAQEKIIAQASRSLRETQSELAAL SANVTKLTASIKKLQSQENKHLQLLEHQLDMAFRLGKHTGIQVLLSGEESQRSERILAYF GYLNEARQKNIDKLNQTRTELASEKKALEAAQNQQKAILITQQQAQQQLESARIQRQKTL SSLESALAKDQQQLSEMKANESRLRDQIAKAEREAKARAEREAREAAKLQAQMKAKEEQA KKKGTTYKYKPTESERSLIARTGGLGRGNGQALWPVRGRTIHSFGETLQGELRWKGMVIA ASEGSEVKAIADGRVLLADWLQGYGLVVVVEHGKGDMSLYGYNQSALVNVGAQVRAGQPI ALVGNSGGQGQPALYFEIRRQGQAVNPLPWLGR >gi|316917221|gb|ADCU01000025.1| GENE 121 125701 - 127245 1501 514 aa, chain - ## HITS:1 COG:YPO0064 KEGG:ns NR:ns ## COG: YPO0064 COG0696 # Protein_GI_number: 16120415 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Yersinia pestis # 1 514 1 515 515 891 85.0 0 MSSAKKPMVLVILDGYGYREETQDNAILNAKRPVMDRLWKEYPHTLISASGLDVGLPDGQ MGNSEVGHVNLGAGRIVYQDLTRLDKEIKDGDFFANEVLVGAVDKAVSLGKAVHIMGLMS PGGVHSHEEHILAMVELAAKRGAEKIYLHAFLDGRDTPPRSAENTLKRFTEKFAELGKGR IASLIGRYYAMDRDNRWDRVQLAYDLLTEAKGEFTAENAVAGLEAAYARDENDEFVKPTV IKAAGEPDAIMEDGDALIFMNFRADRARQITRTFVNADFDGFKRNKVVNFSNFVMLTEYA ADIKAACAYPPSSLENTFGEWLMKHDKTQLRISETEKYAHVTFFYNGGVEEPFKGEDRIL INSPKVATYDLQPEMSSAELTEKLVAAINSGKYDAIICNYPNGDMVGHTGIYDAAVKAVE TLDHCVGQVVEAVQNVGGQLLITADHGNAELMRDQVTGAAYTAHTNLPVPLIYVGKPAKA VEGGKLSDIAATMLTMMDMEVPKEMTGKPLFIVE >gi|316917221|gb|ADCU01000025.1| GENE 122 127444 - 127626 125 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGCNDSRQLRDKIKVSEYTCAVRQLQPEDLLLKTNLRHNPKFFIIQTGFTCPKCGTETII >gi|316917221|gb|ADCU01000025.1| GENE 123 127625 - 128062 543 145 aa, chain + ## HITS:1 COG:YPO0065 KEGG:ns NR:ns ## COG: YPO0065 COG0607 # Protein_GI_number: 16120416 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Yersinia pestis # 3 145 2 144 144 225 73.0 2e-59 MQMQEIMQFVSAHPILSVAWIVLFVAVLVTTFKSRFSKVKEITRGEATLLINKEDAIVVD TRSREDFRKGHLANSLNLTPSDLKNGSFGELDKHKTQPVIVVCANGMSSRESGEHLVKAG FERVYTLKDGIAGWSGENLPLARGK >gi|316917221|gb|ADCU01000025.1| GENE 124 128080 - 128328 342 82 aa, chain + ## HITS:1 COG:YPO0066 KEGG:ns NR:ns ## COG: YPO0066 COG0695 # Protein_GI_number: 16120417 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Yersinia pestis # 1 82 1 82 82 150 86.0 5e-37 MANIDIYTKATCPFCHRAKALLQSKGAQFHEIAIDNDPKKREEMIERSGRTTVPQIFING QHIGGCDDLHALDAKGGLEPLL >gi|316917221|gb|ADCU01000025.1| GENE 125 128391 - 128864 573 157 aa, chain + ## HITS:1 COG:STM3701 KEGG:ns NR:ns ## COG: STM3701 COG1952 # Protein_GI_number: 16766986 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecB # Organism: Salmonella typhimurium LT2 # 1 153 1 152 155 271 89.0 5e-73 MSEQNNSEMSFQIQRVYTKDISFEAPNAPAVFQKEWQPEVKLDLDTASTQLADGVFEVVL RVTVTASLGEETAFLCEVQQAGIFTISGIEGTQMAHCLGAYCPNILFPYARECITSLVSR GTFPQLNLAPVNFDALFMNYLQQAEGAEGAEQQPLDA >gi|316917221|gb|ADCU01000025.1| GENE 126 128885 - 129883 1142 332 aa, chain + ## HITS:1 COG:YPO0068 KEGG:ns NR:ns ## COG: YPO0068 COG0240 # Protein_GI_number: 16120419 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Yersinia pestis # 1 329 8 336 339 580 88.0 1e-165 MTVIGAGSYGTALAITLARNGHQVVLWGHDPKHINALDAARCNQAFLPDVPFPDTLKLET DLAKAMAASRDVLVVVPSHVFGEVLRQLKPYLRADSRIVWATKGLEAETGRLLQDVAREA LGPDIPLATLSGPTFAKELAAGLPTAIALSSTDAQFTEDLQQLLHCGKSFRVYSNPDFIG VQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLTEMSRLGVALGADPTTFMGMSGLG DLVLTCTDNQSRNRRFGIMLGQGIGVQEAQDKIGQVVEGYRNTKEVMALAQRYGVEMPIT EQIYQVLYCHKDAREAALTLLGRARKDEKTSR >gi|316917221|gb|ADCU01000025.1| GENE 127 130095 - 130916 769 273 aa, chain + ## HITS:1 COG:YPO0070 KEGG:ns NR:ns ## COG: YPO0070 COG1045 # Protein_GI_number: 16120421 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Yersinia pestis # 1 273 1 273 273 481 88.0 1e-136 MSIEELEQIWQCIKTEARGLAECEPMLASFYHATLLKHENLGSALSYILANKLANAIMPA IAIREVVEEAYRADTNMTDYAARDILAVRQRDPAVDKYSTPLLYLKGFHALQAYRIGHWL WSQDRKALAIYLQNQISVVFGVDIHPAARIGCGIMLDHATGIVIGETAVVENDVSILQSV TLGGTGKEGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLHPIPAHTTAAGVP ARIVGRPESEKPSMDMDQLFNGAHDGFEFGDGI >gi|316917221|gb|ADCU01000025.1| GENE 128 130983 - 131456 325 157 aa, chain - ## HITS:1 COG:YPO0071 KEGG:ns NR:ns ## COG: YPO0071 COG0219 # Protein_GI_number: 16120422 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Yersinia pestis # 1 157 1 162 162 295 89.0 2e-80 MLNIVLFEPEIPPNTGNIIRLCANTGFKLHLIEPLGFTWDDKRLRRAGLDYHEFATLKKH HDYQAFLDSEQPERLFALTTKGTPAHSAVSYQAGDYLVFGPETRGLPAYILDALPAQQKI RIPMLASSRSMNLSNAVSVVVYEAWRQLGYEGALLKE >gi|316917221|gb|ADCU01000025.1| GENE 129 131499 - 132869 1321 456 aa, chain - ## HITS:1 COG:YPO0073 KEGG:ns NR:ns ## COG: YPO0073 COG0642 # Protein_GI_number: 16120424 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 1 454 1 454 458 734 85.0 0 MINSLTARIFAIFWLTLALVLMVVLMLPKLDSRQLTSLLDSERRQGIMLEQHVEAELAVD PANDLMWWRRLFRAIDKWSPPGQRLLLVTSEGRVIGAQRNEMQIVRNFIGQSDNADQPKK KKYGRLEMLGPFPIRDGEDNYQLYLVRPASSPQSDFINLMFDRPLLLLLVTMLISSPLLL WLAWSLASPARKLKNAADDVASGNLKQHPELEAGPQEFLATGASFNQMVSALERMVNAQQ RLISDISHELRTPLTRLQLATALMRRRHGEYNELSRIEMEAHRLDSMINDLLALSRNQHK TELEREHLKADELWDDVLENAKFEAEQVGKTLEIISPPGPWPLFGSHAALDSAFENIVRN ALRYSHHKIAVTFSCDNQGITIHVDDDGPGVAPEDREQIFRPFYRTDEARDRESGGTGLG LAIVETVVEQHNGWVKAEDSPLGGLRLTLWLPLYTR >gi|316917221|gb|ADCU01000025.1| GENE 130 132866 - 133564 877 232 aa, chain - ## HITS:1 COG:ECs4838 KEGG:ns NR:ns ## COG: ECs4838 COG0745 # Protein_GI_number: 15834092 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 232 1 232 232 375 90.0 1e-104 MNKILLVDDDRELTSLLQELLDLEGFSVVVAHDGEQALELLDSSIDLLLLDVMMPKKNGI DTLKEVRQHHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSNW NEQQQSNESNAPTLEVDHLLLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVSREH LSQEVLGKRLTPFDRAIDMHISNLRRKLPERKDGQPWFKTLRGRGYLMVSVS >gi|316917221|gb|ADCU01000025.1| GENE 131 133716 - 134189 500 157 aa, chain + ## HITS:1 COG:YPO0075 KEGG:ns NR:ns ## COG: YPO0075 COG3678 # Protein_GI_number: 16120426 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Yersinia pestis # 1 149 1 160 162 119 51.0 2e-27 MRKVTSLAMTFMLAMASTAAFAEGSQHNGMLYQSMDHNRMFDGVNLSEHQRQQMRDLMQL ARHDLPRVDIAEAETMHNLVTAEKFDEAAVRQLAEKMAQESINRQVEMAKIRNQMYNLLT PEQKAQLNERYQQRIANWQQQIATMQNTSALKLGTKE >gi|316917221|gb|ADCU01000025.1| GENE 132 134271 - 135998 864 575 aa, chain - ## HITS:1 COG:NMA0408 KEGG:ns NR:ns ## COG: NMA0408 COG1368 # Protein_GI_number: 15793413 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Neisseria meningitidis Z2491 # 32 569 7 549 550 311 35.0 2e-84 MGQSRSPVSSQQSNSSTLNRFKQNPKTCLYCLFLVIVAVVILAGNTPSAGYPLITALSAF VFIVGMFYLLSGRSIFALSITSLLVIVLQFINQLKVHYYKDHLMFPDIYLATDPSNTATL LHYPLAGLALLGLVIWLIITLVVTWRATARNVSHRVWWRSIGMMILASALVALCVTRYQH VWATTLPGGTGVVSNLVMSASEVEYEPPSFNSESSAYFKQQAAALNLPLANHSQHPDIIV LLQESTVDPRLYSLPDPKLLPRFTMFEQEGNVKAHTPMRVQTFGGGTWLSEFALLTGLRS DDFGAMKNSVFYSAVDHVNDSLFKQMKNNGYYTIVLTPFNKSAYNAGHAYHEMGIDQILQ PQELGYPGKLEDNLWHITTADMLKYVKQIMAKKTDKPLFIYALTMYEHGPYDEKHSDDYH LTHYVKKSGSAGEFSHYVEKIKTSDTALADFFQFVDTRNKPTIFMHFGDHQPAIDWSNGY TTTMSDPMHFTQFSLRDNTGAPAVSDLGRMTDIAFLGGMVLEHANLSVSPFYRANIEMRH LCKGELNDCTNTKLVESYKHYIYSELHAASGDSNP >gi|316917221|gb|ADCU01000025.1| GENE 133 136044 - 136151 59 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLRHSMACKSMRLKYGQNIVDRQFTGTAVRAIKD >gi|316917221|gb|ADCU01000025.1| GENE 134 136332 - 137234 621 300 aa, chain + ## HITS:1 COG:STM4061 KEGG:ns NR:ns ## COG: STM4061 COG0053 # Protein_GI_number: 16767327 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Salmonella typhimurium LT2 # 1 291 1 291 300 474 82.0 1e-134 MEQQYARLVKTAALGATVTATVLLIIKTLAWWHTGSVSLLASLVDSIVDIAASLTNLLVV RYSLQPADEEHTFGHGKAESLAALAQSMFISGSALFLFLTGFQHLINPEPMTDPGLGIGV TIIALACTMVLVTFQRWVVRKTRSQAVRADMLHYQSDVMMNGAILISLGLSWYGFTRADS LFALGIGVYILYSALRMGYEAVQSLLDRALDDDERQAIVDIVHAWPGVSGVHDLRTRQSG PTRFIQLHIEMDDNLPLIHAHEIAEQVEQAILQRFPGSDVIIHQDPCSVVPDTRKGHWEV >gi|316917221|gb|ADCU01000025.1| GENE 135 137570 - 138532 1008 320 aa, chain + ## HITS:1 COG:ECs4841 KEGG:ns NR:ns ## COG: ECs4841 COG0205 # Protein_GI_number: 15834095 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Escherichia coli O157:H7 # 1 320 1 320 320 553 85.0 1e-157 MIKKIGVLTSGGDAPGMNAAIRGVVRAALAKGLEVYGIEDGYLGLYEGRMKQLDRSSVSD MINRGGTFLGSARFPEFRDDKVREKAVDNMRKVGLDALVVIGGDGSYMGAKRITEMGFPC IGLPGTIDNDVAGTDYTIGYFTALETVVEAIDRLRDTSSSHQRISIVEVMGRYCGDLTLA AAIAGGCEFIVLPEVEFKREDLVNEIKAGIIKGKKHAIVAITEHICDIDELAKHIEQETG RETRATVLGHIQRGGAPVAYDRILASRMGAYSIELLLQGYGGRCVGIQNEKLVHHDIIDA VENMKRPFKGDWLETAKMLY >gi|316917221|gb|ADCU01000025.1| GENE 136 138738 - 139727 911 329 aa, chain + ## HITS:1 COG:sbp KEGG:ns NR:ns ## COG: sbp COG1613 # Protein_GI_number: 16131755 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 329 1 329 329 565 84.0 1e-161 MRKFGIGLSLLLVATGALAKDIQLLNVSYDPTRELYQQYNEAFSKYYKQETGDNVTIRQS HGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKAWIKRLPDNSAPYTSTIVFLV RKGTPKQIHDWNDLIKPGVSVITPNPKTSGGARWNYLGAWGYALENNNNDQAKAKEFVKA LYKNVEVLDSGARGATNTFVERGIGDVLIAWENEALLAQHELGKDQFEIVTPSVSILAEP TVSVVDKVVDKRGTRQVADEYLKYLYSPEGQTIAAKNYYRPRDEAIAKQYSQQFPQLKLF TVDQLFGGWQKAQKEHFATGGEFDQISQR >gi|316917221|gb|ADCU01000025.1| GENE 137 139796 - 140563 764 255 aa, chain - ## HITS:1 COG:YPO0085 KEGG:ns NR:ns ## COG: YPO0085 COG0149 # Protein_GI_number: 16120436 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Yersinia pestis # 1 246 1 246 255 372 80.0 1e-103 MRQPLVMGNWKLNGSHHMVNELILALRNELSAVANCDVAIAPPTIYLDQAAHTLAGSRIA LGAQDVGINASGAFTGETSAQMLKDVGAKYIIIGHSERRTYHKESDEFIAEKFAAVKEAG LIPVLCIGETDAENEAGKTQEVCARQLDAVLKTMGAQVFKGAVIAYEPVWAIGTGKSATP AQAQAVHKFIRDHIAKHNAEAAEEVIIQYGGSVNAANAAELFTQPDIDGALVGGASLKAD AFAVIVKAAAEAKTA >gi|316917221|gb|ADCU01000025.1| GENE 138 140690 - 141370 328 226 aa, chain - ## HITS:1 COG:no KEGG:ETAE_3448 NR:ns ## KEGG: ETAE_3448 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 38 226 26 208 209 203 58.0 4e-51 MKKTSCYTSKAFFAILILWYAGSSFSVSAAQEEGRILSDELPAAPYLLPNAPTFDLTLVQ FRAKYNIENPTLIINEYRAISVKNEETAITRAASKINDYLYSSVVLEKGTGKIKSLQITY IPPVSIKNDKENGKDGKKLDKSDDKVSRESRELAINYMAAIMRHFSPTLTFDQCTAKVSS LLNKGKGQLYFAQNDGAMRYVVSDSAEKGITFAVEPIKLSLSDNAA >gi|316917221|gb|ADCU01000025.1| GENE 139 141671 - 142102 270 143 aa, chain + ## HITS:1 COG:YPO0087 KEGG:ns NR:ns ## COG: YPO0087 COG3152 # Protein_GI_number: 16120438 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 138 1 138 144 191 74.0 4e-49 MTIQKWCFSFNGRIGRRDFWIWMGLWALLLVIIFSIAGSGWISLQTAAFGLVFSLWPTAA VLVKRLHDRNKSGWWALLVVVAWMLAAGNWSMLAEIWQWGVGRFIPTLIGVMMLIDCGSF IGTKGDNRFGPEPTPVDFKNAGR >gi|316917221|gb|ADCU01000025.1| GENE 140 142155 - 142901 778 248 aa, chain - ## HITS:1 COG:YPO0088 KEGG:ns NR:ns ## COG: YPO0088 COG1018 # Protein_GI_number: 16120439 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Yersinia pestis # 1 248 1 248 248 412 78.0 1e-115 MAEWVTGTITQVQHWTENLFSITLQAPVHNFTAGQFAKLGLDIDGERVQRAYSYVNAPSD NNLEFYLVTVPDGKLSPRLHSLQAGDTLQVTEEAAGFFVLDEVPDCKTLWMLATGTALGP YLSILQEGKDLERFENIVLVHATRLAQDLSYLPLMQQLEQRYNGKLRIQTVVSRENAAGS LQGRVPALIEDGSLEAAVGLKIDAEESHVMLCGNPQMVRDTQQVLKDSRGMRKHLRRKPG HITSEHYW >gi|316917221|gb|ADCU01000025.1| GENE 141 142904 - 143527 545 207 aa, chain - ## HITS:1 COG:VC2666 KEGG:ns NR:ns ## COG: VC2666 COG2345 # Protein_GI_number: 15642661 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Vibrio cholerae # 1 205 1 205 205 189 47.0 4e-48 MKTPELIMLQLKSLGPQSAKMLADRISITTMGIRQHLQQLEQRELVCYEEARTKVGRPTR YWSLTTKGHSQFPDRHQDLSRVILGAAQQLFGDEGVEKLINVREDSLFQRYATELEKYPE GEERFQALARLRQNDGYMAELEVEDDAVVLIENHCPIGVAAHNCGNLCNSELSLLHRLLG PNYQIDRVEHIISNSRRCAYRITPREL >gi|316917221|gb|ADCU01000025.1| GENE 142 143975 - 145126 1074 383 aa, chain + ## HITS:1 COG:STM3798 KEGG:ns NR:ns ## COG: STM3798 COG0477 # Protein_GI_number: 16767084 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 9 383 20 394 394 476 74.0 1e-134 MLILLVAVGQMAQTIYVPSIADMARDLGVRSGAVQGVMAAYLLTYGGSQLIYGPISDRVG RRPVILAGMGIFIIGALWALLSTNLDMLVMASALQGMGTGVAGVMARTMPRDLYEGPSLR YANSLLNMGILVSPLLAPVIGGMLDSVLGWRACYGFLLLLCVCVAFSMYRWLPETRPANA PRKNMFASYKMLLTNGSFGCYLIMLVGGLAGVAVFEACSGVLMGGVLGLSGIVVSILFIL PIPAAFFGAWYAGRQGKSFSTLMWHSVISCLLAGVMMWIPGWFGIMNIWTLVVPAALFFF GAGMLFPLATTGAMEPFPFLAGAAGALVGGLQNVGSGAMAWFSALLPQTGQFSLGMLMTA MAVMILLCWLPLAHKMQQQGHMV >gi|316917221|gb|ADCU01000025.1| GENE 143 145183 - 146193 1122 336 aa, chain - ## HITS:1 COG:glpX KEGG:ns NR:ns ## COG: glpX COG1494 # Protein_GI_number: 16131763 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Escherichia coli K12 # 1 331 1 331 336 531 85.0 1e-151 MKRELAIEFSRVTEAAALAGYKWLGRGDKNAADGAAVNAMRIMLNQVDIDGEIVIGEGEI DEAPMLYIGERVGTGNGDQVDIAVDPIEGTRMTAMGQSNALAVMAVGDKGTFLRAPDMYM EKLVVGPQAKGVIDLNRPLAENLRLVAEKLEKPLHELTVITLAKPRHDAVIAEMQTLGVK VFAIPDGDVAASILTCMPESEVDVMYGIGGAPEGVVSAAVIRALDGDMHGRLIARHNVKG DTPENRALGEQELKRCAEMGIEAGKVLRLDEMARNDNVVFSATGITKGDLLEGIYRKGNM ATTETLLVRGKSRTIRRIRSTHYLDRKDPKICELII >gi|316917221|gb|ADCU01000025.1| GENE 144 146778 - 148286 1441 502 aa, chain - ## HITS:1 COG:ECs4851 KEGG:ns NR:ns ## COG: ECs4851 COG0554 # Protein_GI_number: 15834105 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Escherichia coli O157:H7 # 3 502 2 501 502 924 89.0 0 MTTEKKYIVALDQGTTSSRAVVLDHDANIISVSQREFEQIYPKAGWVEHDPMEIWATQSS TLVEVLAKADISSDQIAGIGITNQRETTIVWEKETGKPIYNAIVWQCRRTADICEKLKKA GMEEYIRHNTGLVVDPYFSGTKVKWILDHVEGSRERAKRGELLFGTVDTWLVWKMTQGRV HVTDYTNASRTMMFNIHTLEWDERMLEVLDIPREMLPTVHPSSEIYGQTNIGGKGGTRIP IAGIAGDQQAALYGQLCVQEGMAKNTYGTGCFLLMNTGKEAVPSKHGLLTTIACGPRGEV NYALEGAVFIGGASIQWLRDEMKLINDAADSEYFATKVKDSNGVYVVPAFTGLGAPYWDP YARGAIFGLTRGVNSNHIIRATLESIAYQTRDVLDAMQADSGTRLKALRVDGGAVANNFL MQFQSDILGTRVERPAVLEVTALGAAYLAGLAVGFWSDLEELRSKATIEREFRPSIETVE RNYRYSGWKKAVSRAQAWEEHD >gi|316917221|gb|ADCU01000025.1| GENE 145 148372 - 149217 785 281 aa, chain - ## HITS:1 COG:YPO0091 KEGG:ns NR:ns ## COG: YPO0091 COG0580 # Protein_GI_number: 16120440 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Yersinia pestis # 1 281 1 282 282 473 88.0 1e-133 MSQTASSTLKGQCIAEFLGTALLIFFGCGCVAALKLAGASFGQWEISIIWGLGVAMAIYL TAAISGAHLNPAVTIALWLFACFDKRKVIPYIIAQVAGAFCAAALVYGLYQNLFVDFEQA HQIVRGSVASLDQAGVFSTYPNPHISVGQAFLVETVITAILMCLILALTDDGNGIQRGPL APLLIGILIAVIGASMGPLTGFALNPARDFGPKAFAYLAGWGEVAFTGARDIPYFLVPIF GPIVGACIGAFGYRSLIGRHLPCDVCKLEDEPATKTEQRKA >gi|316917221|gb|ADCU01000025.1| GENE 146 149229 - 149429 63 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MICVSGQITKKFGKKSTEYADSLIFMTKYTHFDFAISRFCSLTINLQQAQKKYMRACFTP PTIIRR >gi|316917221|gb|ADCU01000025.1| GENE 147 149740 - 149982 425 80 aa, chain + ## HITS:1 COG:YPO0093 KEGG:ns NR:ns ## COG: YPO0093 COG3074 # Protein_GI_number: 16120442 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 79 1 79 79 73 83.0 1e-13 MSFEVFEKLEAKVQQAIDTITLLQMEIEELKEQNTQLNQEVQQAAGSREALVRENEQLKE EQTAWQERLRSLLGRMDEVN >gi|316917221|gb|ADCU01000025.1| GENE 148 150056 - 150541 597 161 aa, chain - ## HITS:1 COG:ECs4856 KEGG:ns NR:ns ## COG: ECs4856 COG0684 # Protein_GI_number: 15834110 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Escherichia coli O157:H7 # 1 161 1 161 161 282 89.0 2e-76 MKYDTSELCDIYHEDVNVVEPLFSNFGGRTSFGGQITTVKCFEDNGLLYELLEENGRGRV MVIDGGGSVRRALINAELARLATQNEWEGIVVYGAVRQVDDLEELDIGIQAMAAIPAGAD GEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEEPLDLE >gi|316917221|gb|ADCU01000025.1| GENE 149 150673 - 151590 851 305 aa, chain - ## HITS:1 COG:YPO0104 KEGG:ns NR:ns ## COG: YPO0104 COG1575 # Protein_GI_number: 16120451 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Yersinia pestis # 1 305 1 305 305 402 75.0 1e-112 MSSSTTISRPRAWLESLRLRTLPLALASIVTGSAIAAWQNTFKVEIALLALLTAAMLQIL SNLANDYGDAVKGSDTEERIGPLRGMQKGVITQAQMKRALGITVVLTVLSGIALIAVACQ KPQDIIGFLILGLMAIVAAITYTVGTRPYGYMGLGDISVLVFFGWLSVAGTYYLQAGTFD SVVMLPATACGFLATAVLNINNLRDIENDAINGKNTLAVRLGPIKARYYHVGLLVGSVVC LALFALLYLKSAFGWLFVLAIPMLYKHGHYVFTHRTPEAMRPMLESMVKSALLTNVLFAI GTVLS >gi|316917221|gb|ADCU01000025.1| GENE 150 151758 - 153089 1224 443 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 4 443 8 466 466 476 53 1e-133 MSEMTPREIVSELDSYIIGQHSAKRAVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTG VGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAMKMVRMQSIEKNR YRAEEMAEERILDVLIPPAKNNWGQPEQSAEPSAARQSFRKKLREGQLDDKEIELELAAS PVGVEIMAPPGMEEMTNQLQSMFQNLGGQKQKARKIKIKEAFKLLIEEEAAKLVNPEELK EQAINAVEQNGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLIEGCTVSTKHGMVKTD HILFIASGAFQVSSPSDLIPELQGRLPIRVELQALTTEDFERILTEPSASLTEQYQALMA TEGLTINFTADGVRHIAEAAWRVNESAENIGARRLHTILERLVEEISFEASDMSGQTVTI DAEYVRNHLDELVADEDLSRFIL >gi|316917221|gb|ADCU01000025.1| GENE 151 153101 - 153550 599 149 aa, chain - ## HITS:1 COG:ECs4859 KEGG:ns NR:ns ## COG: ECs4859 COG5405 # Protein_GI_number: 15834113 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease HslVU (ClpYQ), peptidase subunit # Organism: Escherichia coli O157:H7 # 1 149 28 176 176 265 91.0 2e-71 MKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELFERKLELHQGHLVKAAVELAKDWRTDR MLRKLEALLAVADENASLIITGNGDVIQPENDLIAIGSGGPYAQAASRALLENTELSARE IVDKALGIAGDICIYTNQFHTIEELDSKA >gi|316917221|gb|ADCU01000025.1| GENE 152 153718 - 154593 587 291 aa, chain - ## HITS:1 COG:YPO0107 KEGG:ns NR:ns ## COG: YPO0107 COG3087 # Protein_GI_number: 16120454 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Yersinia pestis # 1 291 33 281 281 217 53.0 2e-56 MVVLAMGVLVTFAAGLYFLTHHKPDSDELLPTQAKHAGNGLPPKPEERWRYIKELENRQV GVATPTQPSSSASATQNQQPQLTAEQRQLLDQMQSDMRQQPTQLSEVPYNDQMQTARRTP QNSRMPDQTYTQQQPVTTTQPRNPFSQQNTTTTQPTQPRQTQTEPTRPARTTPPAQTAQQ PVQQPHKEKPAPVTSVAEQPTAAKEAKQEKAPEKENSQKWLVQCGSFRSTDQAESVRAQL AFGGVESRITAGGGWNRVLLGPYSSRAAADKMLQRLKGEGMSGCIALSAGG >gi|316917221|gb|ADCU01000025.1| GENE 153 154826 - 155836 949 336 aa, chain - ## HITS:1 COG:YPO0108 KEGG:ns NR:ns ## COG: YPO0108 COG1609 # Protein_GI_number: 16120455 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 2 335 8 341 342 542 80.0 1e-154 MSAATMKDVAEHAGVSTATVSRALMNPEKVSAATRQKVEQAVLAVGYSPHALARSSKRNE SRTILVIVPDICDPFFAEVIQGVERTAAEHGYLVLLGDCAQQQQQEKTFVNLIITKQIDG MLLLGSNVPFDASKEEQKNLPPMVMANEFAPELELPTVHIDNLTAAFEAVLYLHELGHHR IACIAGPESMPLSKYRLRGYIQALRRCGIAEEKSFIERGDFTYEAGAQAMLALMSLPQPP TAIFCHSDVMAIGALSQAKRMGLRVPDDVSLVGFDDIKLAQYCDPPLTTVSQPRYQIGRE AMLLLLEQLHSRSVVSGSRLLDSEFIVRGSTSAPKR >gi|316917221|gb|ADCU01000025.1| GENE 154 156132 - 158327 1370 731 aa, chain - ## HITS:1 COG:YPO0110 KEGG:ns NR:ns ## COG: YPO0110 COG1198 # Protein_GI_number: 16120456 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Yersinia pestis # 1 731 1 732 732 1171 78.0 0 MPVVHVALPVPLSRTFDYLLPTGITPIAGARVSVPFGQRKMIGIITGFGEHSELPLENLK SVHQVLDNESLFSSRMWHMLRWAADYYHYPIGEVLFHALPVMLRQGKPAQHGQLWQWVIT EQGKATPPETLKRAPKQQRALATLLQRPLYRHQVTECDLNEAALQSIKTKGLAELRAESP ELHDWHANYAVNGERLKLNTEQATAVGAIRSEDNQFSAWLLAGVTGSGKTEVYLSVIENI LAQGRQALVLVPEIGLTPQTIARFRERFNAPVDVLHSGLNDSERLAAWLRARNGESAIVI GTRSALFTPFARLGVIIIDEEHDGSYKQQEGWRYHARDLAVFRAHQENIPIVLGSATPAL ETLHNVELGKYRRLRLTQRAGNAKPAAQHLLDLKGLPLKAGLAQPLLQRMKQHVDAGNQV ILFLNRRGFAPALLCHECGWIAECQRCDHYYTLHQQQHHLRCHHCDSQKPIPRQCPQCGS TNLLPVGLGTEQLEAELTTLFPDTPITRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM LAKGHHFPNVTLVALLDVDGALFSADFHSAERFAQLYTQVSGRAGRAGKQGEVILQTHHP EHPLLLTLLNQGYDAFAEQALKERKSVFLPPYTSHIMVRADDHDNQNAPQFLQQLRNLLE ASPLRDESFWILGPVPALQPKRGGRFRWQLLLQHPSRARLQKIVKGTLPLISTLPAVKRV KWTLDVDPTDN >gi|316917221|gb|ADCU01000025.1| GENE 155 158584 - 158799 356 71 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227113215|ref|ZP_03826871.1| 50S ribosomal protein L31 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] # 1 71 1 71 71 141 88 2e-32 MKQGIHPNYVAITATCSCGNVIKTHSTAGRDLNLDVCSNCHPFYTGKQRDVATGGRVDRF NKRFSVPGTKK >gi|316917221|gb|ADCU01000025.1| GENE 156 159056 - 160783 1449 575 aa, chain - ## HITS:1 COG:STM4118 KEGG:ns NR:ns ## COG: STM4118 COG2194 # Protein_GI_number: 16767383 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Salmonella typhimurium LT2 # 10 575 11 577 577 885 75.0 0 MTSSPNADKAFSWKALFWVLLFFWFFSTVLQAVILVTGYSGSNGIRDSLLYSSLWLIPVF LFPNKTRIISAVIGIILWAASICSLAYYIIYGQEFSQSVLFVMFESNTSEAGEYFSQYFS LHLALILLAYTAVCVFLWTRLRPVYIPSFWRYVIPAAIFYGLIVNPMVYNMLIQKRSFED SLPRLTSRMEPAAPWQMITGYFEYRSQLASLQALLKENSSLPPLANLTDASGNAPRTLVL VIGESTQRGHMSLYGYPRETTPQLDELHKTDKNLTVFNDVVTSRPYTIEILQQALTFANE KNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMTKRNTMLTLFSQQTDKQYYLNQQRTQSA RQYDGDVLQPFKEVMADPAPKKFIVVHLLGTHINYKFRYPEGFDKFNGTEGVPPGLSQDQ IDSYNQYDNANLYNDYVVSSLIKDYSATNPNGFLLYFSDHGEEVYDTPPHNIQGRNEASP TRHMYSIPFILWTSPSWQQSHPRDFASMTDRKYSSSELIHTWSDLAGLKYDLFNPERSLV NPNFVETTRWIGNPYEKKGLHDYDKLPFGDQVGNQ >gi|316917221|gb|ADCU01000025.1| GENE 157 161143 - 163740 2342 865 aa, chain - ## HITS:1 COG:YPO3929 KEGG:ns NR:ns ## COG: YPO3929 COG2352 # Protein_GI_number: 16124059 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Yersinia pestis # 1 865 14 878 878 1515 86.0 0 MLGKLLGDTIKEALGENILDRVETIRKLSKSSRSGNDASRQELLTTLQNLSNDELLPVAR AFSQFLSLTNTAEQYHSISPHGEAASNPEVMAQLFTRLKSNNLSDEQIKKAVDELSIELV LTAHPTEITRRTLIHKLVEVNNCLSQLDHSDLADYERNQIMRRLRQLVAQSWHTDEIRKN RPSPIDEAKWGYAVVENSLWEGVPAFLREFNEQLENSLGYQLPVEAVPVRFTAWMGGDRD GNPNVTAEVTRHALLLSRWKATDLFLRDIAVLVSELSMTECTPELRALAGGDDVQEPYRE LMKKLRTQLTETQAYLAAKIKGERVTRPDNLLVKNEQLWEPLYACYQSLKACGMGIIANG QLLDTLRRVHCFGVPLVRIDVRQESTRHSEALAELTRYLGLGDYESWSEADKQAFLIREL NSKRPLVPRQWEPSAETKEVFDTCSVIAEAPQGSIAAYVISMARTPSDVLAVHLLLKEAG CPYLLPVAPLFETLDDLNNAEDVMTQLLNIDWYRGFIQGKQMVMIGYSDSAKDAGVMAAS WAQYRAQEALVNVCEKAGVALTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQG EMIRFKLGLPQVTISSLSLYTNAILEANLLPPPAPKQEWRDLMDEMSDVSCDMYRGYVRE NKDFVPYFRSATPELELGKLPLGSRPAKRKPNGGVESLRAIPWIFAWTQNRLMLPAWLGA GAALQAAVDGGKQSTLETMCRDWPFFSTRIGMLEMVFAKSDLWLAEYYDQRLVDEALWPL GKQLRDQLSKDIKVVLTISNDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRSMS EPDANVEQALMVTIAGVAAGMRNTG >gi|316917221|gb|ADCU01000025.1| GENE 158 164049 - 165197 735 382 aa, chain - ## HITS:1 COG:argE KEGG:ns NR:ns ## COG: argE COG0624 # Protein_GI_number: 16131795 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli K12 # 1 381 1 381 383 663 81.0 0 MNMKLPPFIELYRALIATPSISATDSALDQSNEALINLLAGWFGDLGFRVEVQPVPHTRN KFNLLASIGQGRGGLMLAGHTDTVPFDDGRWTRDPFTLTEHDNKLYGLGTADMKGFFAFI LDALRDIDASKLSKPLYILATADEETTMAGARYFAATTHLRPDCAIIGEPTSLKPVRAHK GHLSEAIRITGQSGHSSDPARGVNAIELMHDSIGHLLTLRNTLKDRYHHDAFNIPYPTMN LGHIHGGDAPNRICACCELHMDIRPLPGMTLNDIDELLNQALAPVSEKWPGRLTIEHLHV PIPGYECPVHAPLIQVIEGLLGERAEVVNYCTEAPFIQEVCPTLVLGPGSIDQAHQPDEF LATSFIQPTRELIGQVVNHFCR >gi|316917221|gb|ADCU01000025.1| GENE 159 165356 - 166378 671 340 aa, chain + ## HITS:1 COG:YPO3927 KEGG:ns NR:ns ## COG: YPO3927 COG0002 # Protein_GI_number: 16124057 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Yersinia pestis # 8 340 2 334 334 556 81.0 1e-158 MPNAQSQLNGLIVGASGYTGAELAVYLQRHPAMNITGLTVSAQSSDAGKLLSDLHPQLKG IVDLPLQPMGDVAQMAKGVDVVFLATAHEVSHDLAPQFLQAGCVVFDLSGAYRVNQASFY QDYYGFTHQHADWLDKAVYGLAEWRAEDIKQAQLVAVPGCYPTASQLALKPLIDANLLDL NQWPVINAVSGVSGAGRKASMTTSFCEVSLQPYGIFTHRHQPEIATHLGTPVIFTPHLGN FPRGILATITCKLSVGVTVEQVKAAYQQAYAEKPLVRVYDQGVPAIKNVAGTPFCDIGFA LQGEHLIIVSAEDNLLKGAAAQAVQCMNIRFGFNETQSLL >gi|316917221|gb|ADCU01000025.1| GENE 160 166411 - 167190 681 259 aa, chain + ## HITS:1 COG:ECs4888 KEGG:ns NR:ns ## COG: ECs4888 COG0548 # Protein_GI_number: 15834142 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 380 83.0 1e-106 MNNPLIIKLGGVLLDSEEAMQRLFQALVAYRQSHQRPLVIVHGGGCLVDDLMKQLHLPVV KKNGLRVTPADQIGIITGALAGTANKTLLACAKKHHISAVGLSLGDGDMVEVSQLSEELG HVGKAKAGSPALVTTLLATGYLPIISSVGITAEGELMNVNADQAATALAATLGADLILLS DVSGILDGKGQRIEEMTAAKAEQLIAQGIITDGMVVKVNAALDAARSLGRPVDIASWRHA EKLPALFNGVPVGTRILAN >gi|316917221|gb|ADCU01000025.1| GENE 161 167260 - 168474 1339 404 aa, chain + ## HITS:1 COG:VC2642 KEGG:ns NR:ns ## COG: VC2642 COG0137 # Protein_GI_number: 15642637 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Vibrio cholerae # 12 404 12 403 404 610 75.0 1e-174 MATQGISKIVLAYSGGLDTSAIIPWLKENYGDCEVIAFVADIGQEREDLVGVEEKALRSG ASSCYIADLREEFIKDYVYPVLKTGALYEGTYLLGTSMARPLIAKAQVELALKLGADALC HGATGKGNDQVRFETTYTALAPQLKVVAPWREWDLRSREALLDYLKVRDIPTTASLEKIY SRDANAWHISTEGGVLESPWNAANQDCWVWTNSPEDAPNESELVTVGVEKGEVVSVNGKK MSPFACLEALNVLGAKHGVGRIDIVENRLVGIKSRGCYETPGGTIMMAALRGVEQLVLDR DSFKWREQLGQEMSYVVYDGRWFAPLRESIQSAADSIAKDVNGEVVIKLYKGQATAIQKK SGNSLYNEEFATFGEDDVYDHSHAGGFIRLFSLSSRIRALNEKK >gi|316917221|gb|ADCU01000025.1| GENE 162 168631 - 170004 1341 457 aa, chain + ## HITS:1 COG:YPO3924 KEGG:ns NR:ns ## COG: YPO3924 COG0165 # Protein_GI_number: 16124055 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Yersinia pestis # 1 457 1 457 457 813 90.0 0 MALWGGRFSQAADQRFKQFNDSLRFDYRLAEQDITGSVAWSKALVTVNVLTVEEQQKLED ALGILLEEVQADPEAILASDAEDIHSWVETQLINKVGDLGKKLHTGRSRNDQVATDLKLW CKNEIGELLQAVQQLQQALIVTAEANQDAVMPGYTHLQRAQPVTFAHWCLAYAEMLARDE SRLHDTLKRLDVSPLGCGALAGTAYPIDREQLAGWLGFSSATRNSLDSVSDRDHVLELLS DASIGMVHLSRFAEDLIFFNSGEANFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQ GALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWMDCLHMAALVLDGIQVKRPRCQEAA EQGYANATELADYLVAKGVPFREAHHIVGEAVVGAIKQGKALEALSLSELQKFSSVIGDD VYPILSLQSCLDKRSAKGGVSPHQVAQAIADAKQRLL >gi|316917221|gb|ADCU01000025.1| GENE 163 170066 - 171514 1392 482 aa, chain - ## HITS:1 COG:YPO3917 KEGG:ns NR:ns ## COG: YPO3917 COG1249 # Protein_GI_number: 16124049 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes # Organism: Yersinia pestis # 1 482 1 487 487 851 84.0 0 MKELNVDVAVIGGGTAGLGAYRAAKLSTPSVVMIEGGPFGTTCARVGCMPSKLLIAAAEA VHQIERAPGFGVHPQGEIKIDGREVMARVKRERDRFVGFVMEGVISIPDSDKILGYARFI DDNTLQVDDHTRIVAKRIVIATGSRPTWPAPWNELGDRLIINDDVFNWNDLPESVAVFGP GVIGLELGQALHRLGVQVKVFGVGGAVGPLTDSDVRDYARRALGEEFYLDPDVKVEIMQR EGDRVFIRYQDLDGKPQEIMVDYVLAATGRRPNVDNLAIENTSLELDARGVPVADRLTMQ TSVPHIFIAGDASNQLPLLHEASDQARIAGDNAGSYPEIKPGLRRSSISVVFSDPQIAMV GSTYRELSQKYGACGCFEVGEVSFENQGRSRVMLRNKGLLHVYGEQGTGKFLGAEMMGPE VEHIAHLLAWAHQQGMTIDQMLDMPFYHPVIEEGLRTALRDLQSKLRIGDTETERCMRCP GE >gi|316917221|gb|ADCU01000025.1| GENE 164 171604 - 172338 871 244 aa, chain - ## HITS:1 COG:YPO3916_1 KEGG:ns NR:ns ## COG: YPO3916_1 COG0678 # Protein_GI_number: 16124048 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Yersinia pestis # 1 170 1 170 171 338 93.0 7e-93 MFTSQEGKKIPQVTFHTRQGDQWIDVTTDDLFKDKTVIVFSLPGAFTPTCSSSHLPRYNE LAPIFHEKGVDSILCVSVNDTFVMNAWKADQKAEHITFVPDGNGEFTKGMNMLVEKADLG FGPRSWRYSMLVRNGVVEKMFVEPNKPGDPFEVSDADTMLKYLAPDFKVQASVSLFTKPG CPYCAKAKQMLQDRGIQYEEIVLGKDATTVSLRAVTGRATVPQVYIGGQHIGGSDDLEVY LQQA >gi|316917221|gb|ADCU01000025.1| GENE 165 172490 - 173416 910 308 aa, chain + ## HITS:1 COG:YPO3915 KEGG:ns NR:ns ## COG: YPO3915 COG0583 # Protein_GI_number: 16124047 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 308 1 305 305 513 86.0 1e-145 MNIRDLEYLVALSEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA GLLLVDQARTVLREVKVLKEMASQQGEAMSGPLHIGLIPTVAPYLLPQIIPTLHQTFPKL EMYLHEAQTQQLLAQLDSGKLDCAILALVKETEAFIEVPLFDEPMKLAVYNGHPLASKDK IAMSELSGEHLLMLEDGHCLRDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLL PALAVPPERERDGICYLQCYKPEPKRTIALVYRPGSPLRARYEQLAEVIREHMQGVMKQQ CSVLEQAV >gi|316917221|gb|ADCU01000025.1| GENE 166 173399 - 174799 434 466 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 7 453 4 443 458 171 28 2e-41 MQQHYSFDAIVIGSGPGGEGAAMGLVKQGARVAVIERHFSVGGGCTHWGTIPSKALRHAV SRIIEFNQNPLYSDNSRILKSTFPDILRHADSVINQQTRMRQGFYERNHCQLFSGDAEFI DANTISVSYPDGTRDTLSAKNIIIACGSRPYHPSGVDFKHPRIYDSDSILQLNHEPQHII IYGAGVIGCEYASIFRGLSVKVDLVNTRDRLLAFLDQEMSDALSYHFWNNGVVIRHNEEF EQIEGVEDGVIMHLKSGKKVKADCLLYANGRTGNTDALKLENVGLEADGRGLLKVNSMYQ TAISHIYAVGDVIGYPSLASAAYDQGRIAAQAIMQGEANVHLVEDIPTGIYTIPEISSVG KTEQELTAMKVPYEVGRAQFKHLARAQIAGMSVGSLKILFHRETKQILGIHCFGERAAEI IHIGQAIMEQKGEGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF >gi|316917221|gb|ADCU01000025.1| GENE 167 175043 - 175711 489 222 aa, chain + ## HITS:1 COG:ECs4894 KEGG:ns NR:ns ## COG: ECs4894 COG1309 # Protein_GI_number: 15834148 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 207 20 226 234 335 92.0 4e-92 MGVRAQQKERTRRSLIEAAFNQLSAERSFASLSLREVSREAGIAPTSFYRHFRDVDELGL TMVDESGLMLRQLMRQARQRIAKGGSVIRTSVATFMEFIGNNPNAFRLLLRERSGTSAAF RAAVQREVQHFIAELADYLEIENHMPRSFTEAQAEAMVTIVFSAGAEALDIDMEHRRLLE ERLVLQLRMISKGAYYWYRREQEKAHIAHLHENVGQQAQPQE >gi|316917221|gb|ADCU01000025.1| GENE 168 175733 - 176122 330 129 aa, chain + ## HITS:1 COG:no KEGG:ETAE_3473 NR:ns ## KEGG: ETAE_3473 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 1 111 1 111 136 169 78.0 3e-41 MIKSRLDVGTLVLSLVAGLSISGSFAALFSSVVPFSVFPLLALVLSVYCLHQRYLNCSMP EGMPVLSSSCFLLGLLMYSAIVRVEYPEIGSNFMPTILCIVLVFWIAYRIKAFKKNAEPD SDKDFHDPE >gi|316917221|gb|ADCU01000025.1| GENE 169 176220 - 177323 1134 367 aa, chain - ## HITS:1 COG:ECs4896 KEGG:ns NR:ns ## COG: ECs4896 COG2265 # Protein_GI_number: 15834150 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 598 78.0 1e-171 MTPNTLPTDQYDAQLTEKITRLANMMTPFAAPEIEAFRSPASHYRMRAEFRVWHDESDLY HIMFDQQTKQRIRVDQFPAASELINRLMTVMMDELRPNQVLRFKLFQIDYLSTMNNKVVV SLLYHRKLDEEWKAQAEALRDRLRTQGFDIQLIGRATKTKICLDQDYVDECLPVAGRDMV YRQVENSFTQPNAAVNIKMLEWALDVTKNSKGDLLELYCGNGNFSLALARNFNRVLATEI AKPSVAAAQFNISANHIDNVQIIRMAAEDFTQAMNGVREFKRLEGIDLKSYQCETIFVDP PRSGLDDDTLRMVQAYPRILYISCNPETLSANLETLHETHQVKRLALFDQFPYTHHMECG VLLEKRR >gi|316917221|gb|ADCU01000025.1| GENE 170 177703 - 179607 1297 634 aa, chain + ## HITS:1 COG:YPO3910 KEGG:ns NR:ns ## COG: YPO3910 COG4206 # Protein_GI_number: 16124042 # Func_class: H Coenzyme transport and metabolism # Function: Outer membrane cobalamin receptor protein # Organism: Yersinia pestis # 1 634 1 625 625 658 55.0 0 MTIKKNALMAALSVTAFSGWAQDTSDTRSDSSANSNDDVVVTASRFAQPVSTVLAPTDIV TRDDIDRWQAKTLNDVMRRLPGVDIVQNGGMGQSSTMYIRGTSASQVLVLVDGIPVARPG ISNTADFNQIPISLVQRVEYIRGPRSAVYGSGAMGGVINVITQTDKEGAQINAGVGSKGF QQYDGSVRQKVSDNTKVTLAGSYESTKGFNVQPGSTYAPDRDDDGYRNKTFWGGVDHQFS NELSGFARGYGYTNNSDYDLGSPPFTPAYSANEGQTYNHTYDAGLRFLSGAYSSQLTGSY QKVKDYNYSSEYGRYHDGSTLDDMDQRNIQWGNTYSLEHGQISAGVDWQQQRLTSSDTSK SDIYKRDNTGLYLSGQQKLGDVTVEASGREDKDEQFGWHGTWQTAAGWEFTPGYRTTLSY GTGFLAPSLGQQFGSTRFNIDSNPNLKPEASKQWEAGLEGLTGPLDWRLSAYHYKIENLI TYYSAPNANAGSYDNIDSATIKGVEWTGSIDTGIFTHQVTLQYMDPRNDKTDEVLARRAK RQAKYQLDWTMFNVDMDVSYQYYGRRYDNNTSKYNTTQQVLPSYSTVDISASYPVTSHLT VRGRIANLLDKDYETAYGYQTAGREYYLTGSYTF >gi|316917221|gb|ADCU01000025.1| GENE 171 179552 - 180412 574 286 aa, chain + ## HITS:1 COG:YPO3909 KEGG:ns NR:ns ## COG: YPO3909 COG0796 # Protein_GI_number: 16124041 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Yersinia pestis # 1 286 1 287 287 394 70.0 1e-110 MATKPQVENIISPVVTPSNDVATAKPTALVFDSGVGGLSVYQEIRSLLPDLHYIYAFDNQ GFPYGEKDEAFIIERVVKTVAEVQKRHPLSIVIIACNTASTITLPALRERFSFPIVGVVP AIKPAAKLTRNGVVGLLATKATVQRSYTHDLIARFATDCDIKMLGSSELVVLAEAKLHGE VIDHAVLKKILRPWLSMAEPPDTVVLGCTHFPLLREELAAVLPDGTRLVDSGAAIARRVA WLIANQENTLSTEDDVAYATKTNSDTEALLPVLHRMGFSELRELSI Prediction of potential genes in microbial genomes Time: Wed May 18 15:50:17 2011 Seq name: gi|316917114|gb|ADCU01000026.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.26, whole genome shotgun sequence Length of sequence - 125178 bp Number of predicted genes - 107, with homology - 105 Number of transcription units - 58, operones - 25 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 126 - 359 58 ## YPK_3346 hypothetical protein - Prom 585 - 644 80.4 + 5S_RRNA 231 - 358 100.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. + TRNA 444 - 520 90.5 # Asp GTC 0 0 + TRNA 568 - 643 87.1 # Trp CCA 0 0 - Term 638 - 671 4.5 2 2 Tu 1 . - CDS 836 - 1690 455 ## COG0583 Transcriptional regulator - Prom 1724 - 1783 3.6 + Prom 1686 - 1745 4.9 3 3 Tu 1 . + CDS 1786 - 2124 311 ## COG3085 Uncharacterized protein conserved in bacteria + Term 2130 - 2158 2.1 - Term 2118 - 2146 1.3 4 4 Tu 1 . - CDS 2151 - 3677 572 ## COG0606 Predicted ATPase with chaperone activity - Prom 3921 - 3980 3.4 + Prom 3867 - 3926 5.4 5 5 Tu 1 . + CDS 4036 - 5265 926 ## COG0477 Permeases of the major facilitator superfamily + Term 5268 - 5309 2.6 6 6 Op 1 7/0.115 + CDS 5638 - 7284 1538 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 7 6 Op 2 5/0.346 + CDS 7281 - 7556 195 ## COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit 8 6 Op 3 5/0.346 + CDS 7624 - 8556 1140 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 9 7 Op 1 8/0.077 + CDS 8728 - 10578 1773 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 10 7 Op 2 . + CDS 10581 - 12140 1285 ## COG1171 Threonine dehydratase 11 8 Tu 1 . - CDS 12161 - 13042 670 ## COG0583 Transcriptional regulator - Prom 13084 - 13143 4.2 + Prom 13077 - 13136 7.2 12 9 Tu 1 . + CDS 13254 - 14735 1759 ## COG0059 Ketol-acid reductoisomerase + Term 14741 - 14799 2.6 - Term 14735 - 14776 5.0 13 10 Op 1 . - CDS 14791 - 15072 341 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 14 10 Op 2 2/0.654 - CDS 15120 - 15500 175 ## COG0251 Putative translation initiation inhibitor, yjgF family 15 10 Op 3 . - CDS 15497 - 16483 594 ## COG1171 Threonine dehydratase - Prom 16519 - 16578 7.5 + Prom 16475 - 16534 8.7 16 11 Op 1 . + CDS 16564 - 17235 573 ## COG2964 Uncharacterized protein conserved in bacteria 17 11 Op 2 . + CDS 17318 - 19342 1679 ## COG0210 Superfamily I DNA and RNA helicases + Term 19350 - 19396 -0.7 - Term 19369 - 19398 -0.3 18 12 Op 1 4/0.462 - CDS 19422 - 20915 1339 ## COG0248 Exopolyphosphatase 19 12 Op 2 . - CDS 20922 - 22211 953 ## COG0513 Superfamily II DNA and RNA helicases - Prom 22332 - 22391 4.9 + Prom 22242 - 22301 3.0 20 13 Tu 1 . + CDS 22380 - 22706 353 ## COG0526 Thiol-disulfide isomerase and thioredoxins 21 14 Tu 1 . + CDS 23143 - 24402 1114 ## COG1158 Transcription termination factor + Term 24424 - 24459 6.0 + Prom 24454 - 24513 3.1 22 15 Op 1 5/0.346 + CDS 24685 - 25779 680 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 23 15 Op 2 4/0.462 + CDS 25807 - 26841 867 ## COG3765 Chain length determinant protein + Term 26885 - 26915 1.1 24 16 Op 1 10/0.038 + CDS 26927 - 28057 617 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 25 16 Op 2 4/0.462 + CDS 28054 - 29316 1110 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 26 16 Op 3 . + CDS 29313 - 30377 973 ## COG1088 dTDP-D-glucose 4,6-dehydratase 27 16 Op 4 4/0.462 + CDS 30434 - 31162 318 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 28 16 Op 5 6/0.154 + CDS 31167 - 32297 1176 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 29 16 Op 6 . + CDS 32297 - 33547 902 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 30 16 Op 7 . + CDS 33544 - 34629 891 ## Spro_0170 4-alpha-L-fucosyltransferase 31 16 Op 8 . + CDS 34626 - 36002 1002 ## Spro_0171 putative common antigen polymerase 32 16 Op 9 . + CDS 36008 - 36748 652 ## COG1922 Teichoic acid biosynthesis proteins + Term 36762 - 36788 -0.7 + TRNA 37005 - 37081 91.0 # Arg CCG 0 0 + TRNA 37170 - 37245 84.9 # His GTG 0 0 + TRNA 37261 - 37347 69.2 # Leu CAG 0 0 + TRNA 37435 - 37511 92.7 # Pro TGG 0 0 + TRNA 37604 - 37680 92.7 # Pro TGG 0 0 - Term 38331 - 38359 3.0 33 17 Op 1 11/0.038 - CDS 38382 - 39587 1169 ## COG3071 Uncharacterized enzyme of heme biosynthesis 34 17 Op 2 10/0.038 - CDS 39590 - 40768 976 ## COG2959 Uncharacterized enzyme of heme biosynthesis 35 17 Op 3 23/0.000 - CDS 40790 - 41530 336 ## COG1587 Uroporphyrinogen-III synthase 36 17 Op 4 . - CDS 41527 - 42486 1041 ## COG0181 Porphobilinogen deaminase - Prom 42508 - 42567 4.8 37 18 Tu 1 . + CDS 42790 - 45339 1792 ## COG3072 Adenylate cyclase + Term 45345 - 45394 8.2 + Prom 45762 - 45821 6.5 38 19 Tu 1 . + CDS 45874 - 46554 388 ## SeSA_A4268 oligogalacturonate-specific porin + Term 46735 - 46773 7.1 - Term 46721 - 46761 8.3 39 20 Tu 1 . - CDS 46818 - 47138 373 ## COG1965 Protein implicated in iron transport, frataxin homolog + Prom 47126 - 47185 4.7 40 21 Op 1 . + CDS 47232 - 47435 216 ## 41 21 Op 2 4/0.462 + CDS 47510 - 48334 748 ## COG0253 Diaminopimelate epimerase 42 21 Op 3 10/0.038 + CDS 48367 - 49071 651 ## COG3159 Uncharacterized protein conserved in bacteria 43 21 Op 4 8/0.077 + CDS 49068 - 49979 680 ## COG4973 Site-specific recombinase XerC 44 21 Op 5 5/0.346 + CDS 49979 - 50707 642 ## COG1011 Predicted hydrolase (HAD superfamily) 45 22 Tu 1 . + CDS 50793 - 52955 2003 ## COG0210 Superfamily I DNA and RNA helicases + Term 53043 - 53076 -0.4 46 23 Tu 1 . - CDS 53014 - 53487 460 ## Ent638_2080 hypothetical protein - Prom 53566 - 53625 3.7 + Prom 53661 - 53720 4.5 47 24 Tu 1 . + CDS 53965 - 54915 1062 ## COG0598 Mg2+ and Co2+ transporters 48 25 Tu 1 . - CDS 54966 - 55856 719 ## COG2962 Predicted permeases - Prom 55881 - 55940 2.4 49 26 Tu 1 . - CDS 55991 - 56461 443 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism - Prom 56500 - 56559 2.2 + Prom 56544 - 56603 5.5 50 27 Op 1 5/0.346 + CDS 56649 - 57527 791 ## COG2829 Outer membrane phospholipase A + Term 57561 - 57602 1.1 51 27 Op 2 . + CDS 57623 - 59461 1582 ## COG0514 Superfamily II DNA helicase + Term 59468 - 59500 0.2 52 28 Tu 1 . - CDS 59535 - 60377 860 ## COG2961 Protein involved in catabolism of external DNA - Prom 60574 - 60633 2.3 + Prom 60402 - 60461 2.9 53 29 Op 1 5/0.346 + CDS 60601 - 62643 2074 ## COG0339 Zn-dependent oligopeptidases 54 29 Op 2 . + CDS 62648 - 63397 736 ## COG0500 SAM-dependent methyltransferases + Term 63417 - 63454 6.1 55 30 Tu 1 . - CDS 63453 - 63731 285 ## - Prom 63795 - 63854 3.9 + Prom 63796 - 63855 4.2 56 31 Op 1 40/0.000 + CDS 63920 - 64636 676 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 57 31 Op 2 . + CDS 64637 - 66106 1101 ## COG0642 Signal transduction histidine kinase 58 31 Op 3 . + CDS 66178 - 66801 604 ## COG1280 Putative threonine efflux protein + Term 66819 - 66869 13.2 - Term 66815 - 66850 3.4 59 32 Op 1 . - CDS 66911 - 69031 1214 ## Spro_0225 hypothetical protein 60 32 Op 2 . - CDS 69018 - 70235 615 ## Spro_0226 hypothetical protein - Prom 70424 - 70483 2.6 - Term 70407 - 70451 8.2 61 33 Op 1 4/0.462 - CDS 70485 - 71822 1437 ## COG2610 H+/gluconate symporter and related permeases 62 33 Op 2 1/0.731 - CDS 71822 - 72391 374 ## COG3265 Gluconate kinase - Prom 72485 - 72544 2.3 - Term 72464 - 72513 -0.8 63 34 Tu 1 2/0.654 - CDS 72550 - 73545 781 ## COG1609 Transcriptional regulators - Prom 73575 - 73634 5.1 - Term 73605 - 73643 2.5 64 35 Tu 1 1/0.731 - CDS 73657 - 74574 595 ## COG1609 Transcriptional regulators 65 36 Op 1 8/0.077 - CDS 74675 - 76054 964 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 66 36 Op 2 10/0.038 - CDS 76065 - 77375 1040 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 67 36 Op 3 . - CDS 77392 - 77697 395 ## COG1440 Phosphotransferase system cellobiose-specific component IIB - Prom 77864 - 77923 4.3 - Term 77887 - 77920 2.1 68 37 Tu 1 . - CDS 77942 - 78637 665 ## COG1741 Pirin-related protein - Prom 78739 - 78798 3.9 69 38 Tu 1 . + CDS 79200 - 81248 1989 ## COG2217 Cation transport ATPase + Term 81279 - 81325 9.5 + Prom 81357 - 81416 5.8 70 39 Op 1 . + CDS 81439 - 82560 992 ## Spro_0208 hypothetical protein 71 39 Op 2 . + CDS 82560 - 83702 825 ## SeAg_B4057 outer membrane protein 72 39 Op 3 . + CDS 83699 - 84835 723 ## ETAE_0140 hypothetical protein + Prom 84920 - 84979 2.8 73 40 Tu 1 . + CDS 85006 - 85872 748 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 74 41 Tu 1 . - CDS 85784 - 86791 672 ## COG0583 Transcriptional regulator - Prom 86993 - 87052 3.8 + Prom 86841 - 86900 3.5 75 42 Tu 1 . + CDS 87063 - 89339 2296 ## COG0620 Methionine synthase II (cobalamin-independent) + Term 89364 - 89408 8.1 + Prom 89392 - 89451 4.0 76 43 Tu 1 . + CDS 89603 - 90457 531 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 90579 - 90616 0.2 77 44 Op 1 2/0.654 - CDS 90471 - 90815 319 ## COG1445 Phosphotransferase system fructose-specific component IIB 78 44 Op 2 11/0.038 - CDS 90841 - 91728 330 ## COG1180 Pyruvate-formate lyase-activating enzyme 79 44 Op 3 4/0.462 - CDS 91694 - 93991 1636 ## COG1882 Pyruvate-formate lyase 80 44 Op 4 7/0.115 - CDS 94060 - 94380 417 ## COG1445 Phosphotransferase system fructose-specific component IIB 81 44 Op 5 . - CDS 94402 - 95754 1048 ## COG1299 Phosphotransferase system, fructose-specific IIC component - Prom 95823 - 95882 1.8 + Prom 95561 - 95620 3.1 82 45 Op 1 2/0.654 + CDS 95814 - 98315 1956 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 83 45 Op 2 . + CDS 98332 - 98994 771 ## COG0176 Transaldolase + Term 99020 - 99050 3.0 - Term 99007 - 99037 3.0 84 46 Tu 1 . - CDS 99070 - 99831 840 ## COG2820 Uridine phosphorylase - Prom 99929 - 99988 4.2 + Prom 100080 - 100139 6.2 85 47 Tu 1 . + CDS 100170 - 101006 651 ## COG0412 Dienelactone hydrolase and related enzymes + Term 101066 - 101090 -1.0 + Prom 101048 - 101107 2.8 86 48 Op 1 1/0.731 + CDS 101134 - 101919 616 ## COG2365 Protein tyrosine/serine phosphatase + Prom 101958 - 102017 1.5 87 48 Op 2 1/0.731 + CDS 102077 - 103885 1729 ## COG1966 Carbon starvation protein, predicted membrane protein + Term 103908 - 103946 6.7 + Prom 103896 - 103955 3.5 88 49 Tu 1 1/0.731 + CDS 104006 - 104536 436 ## COG0586 Uncharacterized membrane-associated protein + Prom 104566 - 104625 3.6 89 50 Tu 1 5/0.346 + CDS 104658 - 106190 1368 ## COG1322 Uncharacterized protein conserved in bacteria + Prom 106207 - 106266 2.8 90 51 Op 1 7/0.115 + CDS 106294 - 107049 360 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 91 51 Op 2 10/0.038 + CDS 107063 - 107680 497 ## COG3165 Uncharacterized protein conserved in bacteria 92 51 Op 3 6/0.154 + CDS 107677 - 109311 1454 ## COG0661 Predicted unusual protein kinase + Term 109347 - 109392 -0.9 + Prom 109351 - 109410 7.3 93 52 Op 1 16/0.000 + CDS 109446 - 109715 178 ## PROTEIN SUPPORTED gi|90022866|ref|YP_528693.1| ribosomal protein L25 94 52 Op 2 28/0.000 + CDS 109719 - 110273 307 ## COG1826 Sec-independent protein secretion pathway components 95 52 Op 3 2/0.654 + CDS 110277 - 111065 633 ## COG0805 Sec-independent protein secretion pathway component TatC + Term 111080 - 111114 6.6 96 53 Op 1 . + CDS 111128 - 111910 394 ## COG0084 Mg-dependent DNase 97 53 Op 2 . + CDS 111925 - 112947 1248 ## COG0113 Delta-aminolevulinic acid dehydratase + Term 112981 - 113016 6.1 - Term 112969 - 113003 2.4 98 54 Tu 1 . - CDS 113027 - 113515 317 ## COG0250 Transcription antiterminator - Prom 113667 - 113726 6.0 + Prom 113610 - 113669 3.3 99 55 Tu 1 . + CDS 113769 - 114494 768 ## COG3340 Peptidase E + Prom 114565 - 114624 3.9 100 56 Op 1 6/0.154 + CDS 114647 - 116155 1166 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 101 56 Op 2 . + CDS 116204 - 116905 744 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases - Term 116956 - 116988 2.1 102 57 Op 1 20/0.000 - CDS 117028 - 118206 1030 ## COG0183 Acetyl-CoA acetyltransferase 103 57 Op 2 . - CDS 118217 - 120421 2096 ## COG1250 3-hydroxyacyl-CoA dehydrogenase - Prom 120477 - 120536 6.0 + Prom 120520 - 120579 1.9 104 58 Op 1 2/0.654 + CDS 120624 - 121955 1198 ## COG0006 Xaa-Pro aminopeptidase 105 58 Op 2 4/0.462 + CDS 121955 - 122569 407 ## COG1739 Uncharacterized conserved protein 106 58 Op 3 6/0.154 + CDS 122631 - 124082 1058 ## COG0168 Trk-type K+ transport systems, membrane components 107 58 Op 4 . + CDS 124126 - 124665 483 ## COG4635 Flavodoxin Predicted protein(s) >gi|316917114|gb|ADCU01000026.1| GENE 1 126 - 359 58 77 aa, chain - ## HITS:1 COG:no KEGG:YPK_3346 NR:ns ## KEGG: YPK_3346 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis_YPIII # Pathway: not_defined # 1 44 118 161 180 82 90.0 5e-15 MPGSSLLSHGETPHYHRRYGVSLLSSAWGQVGPPRYRRQANSVNQPATYIAILSQLIQSL NKLTLCLSLSTKTPSVL >gi|316917114|gb|ADCU01000026.1| GENE 2 836 - 1690 455 284 aa, chain - ## HITS:1 COG:YPO3904 KEGG:ns NR:ns ## COG: YPO3904 COG0583 # Protein_GI_number: 16124036 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 10 276 1 281 293 287 56.0 2e-77 MINIFVGETVDSELLKTFLEVSRTRHFGKAAESLYLTQSAVSFRIRQLETQVGADLFTRH RNNIQLTEAGERLVPYAEKLMETWLLAKKDVLKSRQHKELSIGAPAMMWEALLISWLTGV YCQKPEILLETRIGQRHTHVRQLHERHLDLLITTEIPKMEELSTEKVGEFSLQLLATAEG SEAKNLPYIRLEWGADFSRFDEQLVSSNKPPILTTSSISIASQIMSQTGGRAFFPVNWGQ SGFYIDESQEALMRPIYAVWLHNSDRKEEIKFLTQSLAAFYQKS >gi|316917114|gb|ADCU01000026.1| GENE 3 1786 - 2124 311 112 aa, chain + ## HITS:1 COG:ECs4699 KEGG:ns NR:ns ## COG: ECs4699 COG3085 # Protein_GI_number: 15833953 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 178 81.0 2e-45 MAESFSTNHRFFDNKHYPRGFSRHGDFTIKEAQVLERFGYAFNELDLGTREPQTEEEELF VAVCRGERQPATEAEKIWSKYIARIRRPKRFHTLSGGKPQMDTVEEYTDSDD >gi|316917114|gb|ADCU01000026.1| GENE 4 2151 - 3677 572 508 aa, chain - ## HITS:1 COG:YPO3902 KEGG:ns NR:ns ## COG: YPO3902 COG0606 # Protein_GI_number: 16124034 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Yersinia pestis # 1 507 1 506 507 635 67.0 0 MSVAMINTRAAIGVQAPAVSVEAHISTGLPGFTLVGLPEATVKEAKDRVRSAIINCGFTF PAKRITVNLAPADLPKEGGRYDLPIAIAILIASEQLSATSVEGLELLGELGLSGALRRIQ GAIPAAMAAQRDQRKLIGPAENEEELGLLGEQQPHLIADNLLQVCDFLSGDLKLLTPRGT QLSAMPSNNKDMRDIIGQEQARRALEIAATGGHNLLLLGPPGTGKTMLASRLNSILPPLT KEEALESAAVASLVHQSTTGQSCYQRPFRTPHHSASMAALIGGGSLPRPGEISLAHNGVL FLDELPEFERRVLDALREPLESGEACISRALAKVTFPARVQLVAAMNPSPTGHYKGIHAR TPPQQILKYLSRLSGPFLDRFDLSIEVPLLPAGVLSIQKTTGESSEMVRQRVCLAREVQY KRSGKLNAHLAGKEMDRVCGLSQPDAAFLEQALEKMGLSVRAWHRILKVARSIADLAQCE NINRSHIAEALSYRSMDRLIQHLHQALQ >gi|316917114|gb|ADCU01000026.1| GENE 5 4036 - 5265 926 409 aa, chain + ## HITS:1 COG:STM0356 KEGG:ns NR:ns ## COG: STM0356 COG0477 # Protein_GI_number: 16763736 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 4 394 7 397 417 575 75.0 1e-164 MFGWSSQQRNVAIASFLSWTLDAFDFFILVFLLSDIAAAFHVGMEQVTLAILLTLAVRPI GALLFGRAAEKYGRRPILMVNILFFSIFELLSAAAPSLTTFLVLRVLYGVAMGGIWGVAS SLAMETIPDRSRGLMSGIFQAGYPFGYLLAAVVYGSLFELVGWRGMFVIGAIPIVLLPFI YFKVPESPVWLAARERKESTALLPVLKSHWKLCIYLVLLMAAFNFFSHGTQDMYPAFLKI QHGFDPKTVSIIAISYNIASIIGGVFFGVLSEKIGRKKAIIIAAALALPVIPLWAFSGGS LMLGIGAFLMQFMVQGAWGVIPTYLNELVPANTRAVLPGFVYQLGNLIASVNATLQATIA ESHGQNYGLAMAIIAGSVAVVIIVLISFGRDTQGASLGRKISSEETTIK >gi|316917114|gb|ADCU01000026.1| GENE 6 5638 - 7284 1538 548 aa, chain + ## HITS:1 COG:YPO3901 KEGG:ns NR:ns ## COG: YPO3901 COG0028 # Protein_GI_number: 16124033 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Yersinia pestis # 1 548 1 548 548 915 84.0 0 MNGAQWVVQALRAQGVDKVFGYPGGAIMPVYDALYDGGVEHLLCRHEQGAVIAAIGYARS TGKPGVCIATSGPGATNLITGLADAMLDSVPIVAITGQVGSALIGTDAFQEIDVLGLSLA CTKHSFLVESLEALPSIMAEAFAVATSGRPGPVLIDIPKDIQLAEGELAAHLSAVSEVMA PCQEELQQARELLAKARKPMLYVGGGVGMAQAVPALRDFVNATGVPAVVTLKGLGAPDAN HPCYLGMLGMHGTKAANLAVQQCDLLIAVGARFDDRVTGKLNAFAPHAKVIHMDIDPAEM SKLRQAHVELCGDLNQMLPALSQPLSIGEWQYDVISLKAEHPWRYDHPGQAIYAPLFLKQ LSDRKPAEAVVTTDVGQHQMWTAQHMQFARPENFITSSGLGTMGFGIPAAVGAQMARPDD MVICVSGDGSFMMNVQELGTIKRKNLPVKIILLDNQRLGMVRQWQQLFFDGRYSETNLSD NPDFIMLASAFGISGQTITRKDQVDAALDTLLNSEGPYLLHVSIDELENVWPLVPPGAGN ESMMEKIS >gi|316917114|gb|ADCU01000026.1| GENE 7 7281 - 7556 195 91 aa, chain + ## HITS:1 COG:YPO3900 KEGG:ns NR:ns ## COG: YPO3900 COG3978 # Protein_GI_number: 16124032 # Func_class: S Function unknown # Function: Acetolactate synthase (isozyme II), small (regulatory) subunit # Organism: Yersinia pestis # 8 89 3 85 85 99 74.0 1e-21 MMQLTSSQHQLAIQARFRPEVLERVLRVIRHRGFQVCAMNMAQMLDSDSVSIELTVSSQR PINLLSSQLNKLMDVASVEIQPQTARQQAVC >gi|316917114|gb|ADCU01000026.1| GENE 8 7624 - 8556 1140 310 aa, chain + ## HITS:1 COG:YPO3899 KEGG:ns NR:ns ## COG: YPO3899 COG0115 # Protein_GI_number: 16124031 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Yersinia pestis # 3 308 2 307 308 582 89.0 1e-166 MTTKKADYIWFNGEMVPWAEAKVHVMSHALHYGTSVFEGVRCYDTNNGPAVFRHREHMQR LRDSAKIYRMPVSYSVDELMEACRETLRKNNLTSAYIRPLVFVGDVGMGVNPPEGYKTDV IIAAFPWGAYLGADALDQGIDAQVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGY QEGIALDVHGYVSEGAGENLFMVKDGIIFTPPFTSAALPGITRDAIIKLAKNAGFEIREQ VMSRESLYLADEVFMSGTAAEITPVRSVDGIQVGIGRCGPVTKQIQEAFFGLFTGKTEDQ WGWLDLVNAK >gi|316917114|gb|ADCU01000026.1| GENE 9 8728 - 10578 1773 616 aa, chain + ## HITS:1 COG:YPO3897 KEGG:ns NR:ns ## COG: YPO3897 COG0129 # Protein_GI_number: 16124030 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Yersinia pestis # 1 616 1 616 616 1098 88.0 0 MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLV AEQIEASGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCIS NCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGANPNVSDAD SEQIERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHVDRKDLFLNAGKRIV ELTKRYYEQDDERVLPRNIANKAAFENAMTLDIAMGGSTNTVLHLLASAQEGEVDFTMTD IDRLSRKVPHLCKVAPSTQKYHMEDVHRAGGVMGILGELDRAGLLNREVNNVLGMTLPET LATYDVMVTEDESVKKMYTAGPAGIRTTKAFSQECRWDSLDTDRQEGCIRTREFAYSQDG GLAVLYGNIAEDGCIVKTAGVEKESLIFRGPAKVYESQDAAVDAILGGKVVAGDVVVIRY EGPKGGPGMQEMLYPTTYLKSMGLGKSCALITDGRFSGGTSGLSIGHVSPEAASGGIIAL VQDGDMIDINIPQRGIKLDILESELANRREEELARGDAAWTPKARERQVSFALRAYAMLA TSADRGAVRDKSKLGG >gi|316917114|gb|ADCU01000026.1| GENE 10 10581 - 12140 1285 519 aa, chain + ## HITS:1 COG:ECs4706 KEGG:ns NR:ns ## COG: ECs4706 COG1171 # Protein_GI_number: 15833960 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 7 519 2 514 514 863 84.0 0 MTSSAKAQKEVLPEQPCGAEYLRAVLRAPVYEVAQVTPLQTMTKLSERIGNTVLVKREDR QPVHSFKLRGAYAMIAGLNEEQKSHGVVTASAGNHAQGVALSASRLGIKSTIVMPVSTAD IKVDAVRGFGGEAVLYGANFDEAKAYAIELAKSKNLTFVPPFDHPAVIAGQGTLAMELLQ QDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIGVEAEDSACLRAALDAGHPVDLARV GLFAEGVAVKRIGDETFRLCREYLDDVITVDSDAICAAVKDLFEDVRAVAEPSGALALAG LKKYVQQHQIQGERLAHVLSGANLNFHGLRYVSERCELGEQREALLAVTIPEQQGSFLKF CQLLGGRSVTEFNYRYADADSACIFVGVRLTRGVAERQEILALLQNGGYQVVDLSDDEMA KLHVRYMVGGRPSKPLQERLYSFEFPESPGALLKFLSTLGTHWNISLFHYRSHGTDFGRV LAAFERADSDPNFESRLHELGYECHDETDNPAFRFFLKG >gi|316917114|gb|ADCU01000026.1| GENE 11 12161 - 13042 670 293 aa, chain - ## HITS:1 COG:YPO3889 KEGG:ns NR:ns ## COG: YPO3889 COG0583 # Protein_GI_number: 16124022 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 293 1 293 293 444 79.0 1e-125 MDLRDLKLFIHLAESRHFGRTAHAVHVSPSTLSRQIQRLEEELGQPLFLRDNRDVRLTSA GEQFKIFAQQTLLQYQQLRNALGQTGPALTGELRLFCSVTAAYSHLPSVLDRFRALHPLV EIKLTTGDAADAVSKIQSDEADLGIAGRPETLPTSIEFTKIGEIPLRLIAPALPCHIRSL ALAEQPDWSQIPFILPQHGPSRQRIDLWFRRQKISNPQIYATVSGHEAIVSMVALGCGIA LLPDVVLNNSPESIRARITELEHVSMVAPFELGVCVQKKRLEEPLIHAFWQLL >gi|316917114|gb|ADCU01000026.1| GENE 12 13254 - 14735 1759 493 aa, chain + ## HITS:1 COG:YPO3888 KEGG:ns NR:ns ## COG: YPO3888 COG0059 # Protein_GI_number: 16124021 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Yersinia pestis # 1 493 1 492 492 907 93.0 0 MANYFNTLNLRQQLAQLGKCRFMGREEFADEAGYLKGKKVVIVGCGAQGLNQGLNMRDSG LDVSYALRAEAIAEKRASWRKATENGFKVGTYEDLIPQADLVVNLTPDKQHSAVVKAVQP LMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPE NDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKL VADGTDPAYAEKLVQFGWETITEALKQGGITLMMDRLSNPAKLRAYALSEQLKGIMAPLF QKHMDDIISGAFSSGMMADWAEDDIKLLTWREETGKTAFETAPQFEGKIAEQDYFDQGVL MIAMVKAGVELAFETMVASGIIEESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYG NYLFANAAVPLLKEKFMSSLQTGDLGKAASTATAVDNAQLRDVNEAIRNHPIEAVGHKLR GYMKDMKRIAVAG >gi|316917114|gb|ADCU01000026.1| GENE 13 14791 - 15072 341 93 aa, chain - ## HITS:1 COG:STM3910 KEGG:ns NR:ns ## COG: STM3910 COG0760 # Protein_GI_number: 16767186 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Salmonella typhimurium LT2 # 1 92 1 92 93 166 91.0 7e-42 MAKNAAALHILVKEEKQALDLLEQLKNGGDFEKLAKKHSICPSGRKGGHLGEFKQGAMVP AFDKVVFSCPLLEPYGPLHTQFGYHIIKVLYRN >gi|316917114|gb|ADCU01000026.1| GENE 14 15120 - 15500 175 126 aa, chain - ## HITS:1 COG:RSp1515 KEGG:ns NR:ns ## COG: RSp1515 COG0251 # Protein_GI_number: 17549734 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Ralstonia solanacearum # 2 121 5 126 130 91 36.0 4e-19 MKIIHSDKLPAPRGHYSPAVLSGNHLYISGQLPISLDNPQPRGDLAEQAHIVFSNIDALL ATENIDKCHLINVQIYLCDVALWPELNRLYAEWMGDHRPARTVVPCSALHYGALLEVSAI AEITLS >gi|316917114|gb|ADCU01000026.1| GENE 15 15497 - 16483 594 328 aa, chain - ## HITS:1 COG:RSp1516 KEGG:ns NR:ns ## COG: RSp1516 COG1171 # Protein_GI_number: 17549735 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Ralstonia solanacearum # 3 322 1 320 323 365 64.0 1e-101 MPLLTMTVSADDVREAAKILQGAAHRTPVLTSTQANAITGANLFFKCENYQRVGAFKFRG AYNAISHLTQEQKKRGVVAFSSGNHAQAMALAARELEVPVTIVMPHDAPAAKLAATRGYG AEVIIYNRQKEDREAIAADLAAKRGLSIIPPYNHPHVIAGQGTSALELFEEVGELDFLFV CTGGGGLLSGCAIAANHLAPDCRVFGVEPEAGNDVQQSLRSGERVSIPVPDTIADGAQTQ CVGELTFPIIRNFVEDILTVSDQQLCNQMRFFMERMKMVVEPTGCLAAAAAMSGNIDIRG ARVGIIVSGGNVDAESYGDFIKRGQSLS >gi|316917114|gb|ADCU01000026.1| GENE 16 16564 - 17235 573 223 aa, chain + ## HITS:1 COG:RSp1517 KEGG:ns NR:ns ## COG: RSp1517 COG2964 # Protein_GI_number: 17549736 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 10 217 2 208 214 212 55.0 5e-55 MKNNESSTAEVLSENQLLLREGAKIAKALGEMFAPTCEVVLHDLTNPMHSIVAIEQPLSG RKIGDPSTEMGLARIRDPHYPDVVQNYANRFPDGRPAKSTSIGLRNSQGEFVAALCLNMD VSLLDSVQRVLSQLTSVDSEHAPTQESLRSSFGSKDVKRAIEDYAAAMSSQPRALSAPQR KVLIRHLATSGLLQLRGAAKIVADELGISRASVYNALKVEPTR >gi|316917114|gb|ADCU01000026.1| GENE 17 17318 - 19342 1679 674 aa, chain + ## HITS:1 COG:YPO3872 KEGG:ns NR:ns ## COG: YPO3872 COG0210 # Protein_GI_number: 16124005 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Yersinia pestis # 1 671 1 671 673 1172 86.0 0 MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRECGYQARHIAAVTFTNKAA REMKERVAQTLGRKEARGLMISTFHTLGLEIIKREYKALGMKANFSLFDDQDQLALLTDL TEQWLEKDKDLLKQLISTISNWKNDLIDPQQAATHAFSERDKIFVHCYQLYDAQLKACNV LDFDDLILLPTLLLRSNEEVRERWQQRIRYLLVDEYQDTNTSQYELVKLLVGNRARFTVV GDDDQSIYSWRGARPQNLVLLKEDFPALQVIKLEQNYRSSQRILKSANILIANNPHVFEK RLFSELGYGEELKIITANNEDHEAERVVGELIAHHFINKTSYSDYAILYRGNHQSRVFEK MLMQNRIPYRISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPRREIGPATLQK LGEWANHRGISLFRASFDFGLSQTLTGRGLESLQRFTHWMQEVSALSEREPIAAVRDLIH GVDYESWLFETSPSPKAAEMRMKNVNQLFSWMTEMLEGSDIDEPMTLTQVVTRFTLRDMM ERGESEDEADQVQLMTLHASKGLEFPYVYLVGMEEGLLPHQSSIDEDNVDEERRLAYVGI TRAQKELVFTLCRERRQYGELVRPEPSRFLLELPQDDLNWETERKVVSPQERMQKGQANV ANIRAMLAKAKGGS >gi|316917114|gb|ADCU01000026.1| GENE 18 19422 - 20915 1339 497 aa, chain - ## HITS:1 COG:ECs4712 KEGG:ns NR:ns ## COG: ECs4712 COG0248 # Protein_GI_number: 15833966 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Escherichia coli O157:H7 # 1 493 1 493 494 686 72.0 0 MRSSASLYAAIDLGSNSFHMLVVREVAGSIQVLARIKRKVRLAAGLDSENQLSDEAMQRG WQCLRLFSERLQDIPREQIRVVATATLRIAKNAQQFITQAEEILGRPVQVISGEEEARLI YQGVAHTTGGSAQRLVVDIGGGSTELAAGTGATADVLHSLQMGCVTWLERYFNDRNLTQE NFDRAGLAAREMLLPVVDSLKQHGWQICVGASGTVQALQEIMVAQGMDERITLNKLLQMR QRAIQCGKLEELEIEGLTLERALVFPSGLSILIAIFETLEIESMTLSGGALREGLVYGML DLPVEQDIRSRTIRNIQRRYQLDIEQAERVSLLAESFVLQLSKSWQIDSRSAELLHWACL LHEVGLSVDFKQSTQHAAYLIRNIDLPGFTPAQKKLLAALLQNQNGMLDMTALSQQNAVP QEIAHRLCRILRLAIIFASRRRDDTMPLLNLKAEGDKLHVVLPAGWLQAHPLRAENLHQE SLWESYVHWTLLVEEIE >gi|316917114|gb|ADCU01000026.1| GENE 19 20922 - 22211 953 429 aa, chain - ## HITS:1 COG:YPO3869 KEGG:ns NR:ns ## COG: YPO3869 COG0513 # Protein_GI_number: 16124004 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Yersinia pestis # 1 427 1 426 428 778 87.0 0 MSKTHLTEQKFADFALHPTVVKALESKGFHNCTPIQALALPLTVNGRDVAGQAQTGTGKT LAFLASTFHYLLTHPVAENRKTNQPRALIMAPTRELAVQIHSDAEALAHETGLKLGLAYG GDGYDKQLKVLESGVDILIGTTGRLIDYAKQGHIDLGCIQVVVLDEADRMFDLGFIKDIR WLFRRMPATNQRLNMMFSATLSYRVRELAFEHMNNAEYIEVEPEQKTGHRIKEELFYPSN EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD DFTKGNLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGYSITLA CEEYVLNLPAIEAYIEHSIPVSKYNSEALLTDLPAPKRLTRPRSNNGQRRSSGPRRNNGS MRQSRKRTS >gi|316917114|gb|ADCU01000026.1| GENE 20 22380 - 22706 353 108 aa, chain + ## HITS:1 COG:ECs4714 KEGG:ns NR:ns ## COG: ECs4714 COG0526 # Protein_GI_number: 15833968 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 108 19 126 127 200 87.0 4e-52 MSDKIVHLSDNSFDTDVLKAEGPILVDFWAEWCGPCKMIAPILDEIATEYEGKLTIAKLN IDENPATAPKFGIRGIPTLLLFKNGAVAATKVGALSKTQLKEFLDANL >gi|316917114|gb|ADCU01000026.1| GENE 21 23143 - 24402 1114 419 aa, chain + ## HITS:1 COG:ECs4716 KEGG:ns NR:ns ## COG: ECs4716 COG1158 # Protein_GI_number: 15833970 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Escherichia coli O157:H7 # 1 419 1 419 419 806 98.0 0 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD GFGFLRSGDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP KAGKTMLLQNIAQSIAYNHPDCTLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS >gi|316917114|gb|ADCU01000026.1| GENE 22 24685 - 25779 680 364 aa, chain + ## HITS:1 COG:YPO3866 KEGG:ns NR:ns ## COG: YPO3866 COG0472 # Protein_GI_number: 16124001 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Yersinia pestis # 1 362 1 362 365 519 81.0 1e-147 MNLLDMSMSLLLIFLFSFAFLFFARKVAKKIGLVDKPNYRKRHQGLIPLVGGISVYAGIC FTFLFFQPYIPHAKLYLICAGILVLVGALDDRFDISVKFRATVQALIAIAMMVYGGLYLM TLGHVLGPWELNLGPFGYVVTLFAVWAAINAFNMVDGIDGLLGGLSCVTFAAMGILLFQD HQGDLALWCFAIIAAILPYIVLNLGILGRRYKVFMGDAGSTLIGFTVIWILLQSTQGKSH PMNPVTALWMIAIPLMDMIAIMYRRLRKGMSPFSPDRQHIHHLIMRAGFTSRQAFVLITV AAALLAAIGVLGERLQFMPEWGMLALFLLAFFMYGYCIKRAWRVARYIKRMKRRLRNAAQ RKKA >gi|316917114|gb|ADCU01000026.1| GENE 23 25807 - 26841 867 344 aa, chain + ## HITS:1 COG:YPO3865 KEGG:ns NR:ns ## COG: YPO3865 COG3765 # Protein_GI_number: 16124000 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Yersinia pestis # 2 342 8 349 353 500 73.0 1e-141 MSNQNEMPVENELDIRGLCRTLWQGKAWIIGVAAAFAIVAILVSFLMKQEWSATAITDKP TVNLLGGYYSQQQFLRNLDQRIGGNQTLEPSIADEAYNEFIMQLAAYDTRRDFWLKSKYY QERKEGDVKADAALLDEMVNNIVFIPRDDAKKTNDSVKLIAETAADANTLLRQYVDFASQ QAASHLNEEIQGAWAARTISLKAQVKRQEEVASAIYQREVKGLEQGLKIAQQQGISSSRT DTPAEQLPAADLFMLGRPMLQARLEALQASGPSYDLDYDQNRAMLNTLNVGPTLDSKFQT YRYLRTPEEPVKRDSPRRGFMLVMWGAIGALVGAGVALVRRTRP >gi|316917114|gb|ADCU01000026.1| GENE 24 26927 - 28057 617 376 aa, chain + ## HITS:1 COG:YPO3864 KEGG:ns NR:ns ## COG: YPO3864 COG0381 # Protein_GI_number: 16123999 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Yersinia pestis # 1 376 1 376 376 657 82.0 0 MKVLTVFGTRPEAIKMAPLVHALAKDSAFEAKVCVTAQHREMLDQVLNLFEITPDYDLNI MRPGQGLSEITCRILEGLKPVLEDFKPDVVLVHGDTTTTMAASLAAFYQRIPVGHVEAGL RTGNLYSPWPEEANRTLTGHMAMFHFAPTETSKQNLIREAISDTNIFITGNTVIDALIWV RDRVLGNEELKKSLDLRYPFLDKTKKLILVTGHRRESFGGGFERICSALAEIARSHPDVQ VVYPVHLNPNVSEPVNRILRGIDNVILIEPQDYLPFVYLMNHAYMILTDSGGIQEEAPSL GKPVLVMRDTTERPEAVTAGTVRLVGTDTKKILEQVSRLLTDDEEYHAMSRAHNPYGDGH ACQRILEALKNHQVTL >gi|316917114|gb|ADCU01000026.1| GENE 25 28054 - 29316 1110 420 aa, chain + ## HITS:1 COG:YPO3863 KEGG:ns NR:ns ## COG: YPO3863 COG0677 # Protein_GI_number: 16123998 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Yersinia pestis # 1 420 1 420 420 739 86.0 0 MSFETISVIGLGYIGLPTAAAFSSRQKKVIGVDVNQHAVDTINRGAIHIVEPDLDKVVKQ AVDGGFLRAVTTPEAADAFLIAVPTPFKGDHEPDMVYVESAAKSIAPVLKKGDLVILEST SPVGATEQMVAWLAESRPDLSFPHQAGESADVNIAYCPERVLPGKVMVELIQNDRVIGGM TPKCSARASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICDTQGINV WELIALANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPQQARLIHTARLVNDGKPIWVV DRVKAAVADCLSQSGKRAAEIKIACFGLAFKPDIDDLRESPAMEIAHMIAEWHAGQTLVV EPNIEQLPKKLIGHADLVTTADALRQADVIVMLVDHKQFKAVPAAQVTQSYIVDTKGVWQ >gi|316917114|gb|ADCU01000026.1| GENE 26 29313 - 30377 973 354 aa, chain + ## HITS:1 COG:YPO3862 KEGG:ns NR:ns ## COG: YPO3862 COG1088 # Protein_GI_number: 16123997 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Yersinia pestis # 1 353 1 353 355 647 86.0 0 MKRILVTGGAGFIGSAVVRHIIADTNNSVVVVDKLTYAGNLESLTPVSDSDRYAFEQVDI CNRTELDRVFAQYQPDYVMHLAAESHVDRSIDGPAAFIETNIVGTYTILEAARQYWNGLD EQRKSAFRFHHISTDEVYGDLHGTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGF PTIVTNCSNNYGPYHFPEKLIPLIILNALAGKPLPVYGNGAQIRDWLYVEDHARALYLVV TEGVIGETYNIGGHNERKNIDVVKTVCTLLEELVPSKPDGVEHYADLITYVTDRPGHDMR YAIDAAKIERELGWRPQETFESGIRKTVEWYLANESWWKRVQDGSYAGERLGLQ >gi|316917114|gb|ADCU01000026.1| GENE 27 30434 - 31162 318 242 aa, chain + ## HITS:1 COG:YPO3860 KEGG:ns NR:ns ## COG: YPO3860 COG0454 # Protein_GI_number: 16123995 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Yersinia pestis # 24 242 1 221 222 245 61.0 6e-65 MCVRANIEPLAWESEYFQLRSAKLAFSSTAPQLTTADLQPFDIVQAKIPANQLVLADDLA NLGFRLVEGEIDLSLSTGLEQIGTRNANSAGTTIFGSRIAVPEDIPWLRAQAAQAFALSR FRAPWYQAGDSARFYAEWVEKAVLGTFDHQCLLVLNTQMKPAGFVTLRALANGEARIGLL AVAPEAAGLGIGKQLMQLAQNWCRDNNLSCLHVATQTGNIPALRLYIRSGAVIESSAYWL YR >gi|316917114|gb|ADCU01000026.1| GENE 28 31167 - 32297 1176 376 aa, chain + ## HITS:1 COG:wecE KEGG:ns NR:ns ## COG: wecE COG0399 # Protein_GI_number: 16131647 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Escherichia coli K12 # 1 375 1 375 376 705 86.0 0 MIPFNAPPVVGTELEYMQAAMSSGKLCGDGGFTRRCQQWMEQRFGSSKVLLTPSCTASLE MAALLLDIQPDDEVIMPSFTFVSTANAFVLRGAKVVFVDLRPDTMNIDETKIEAAITDKT RAIVPVHYAGVACEMDTIMALAKKYNLFVVEDAAQGVMSTYKGKALGSIGHIGCFSFHET KNYTAGGEGGATLINDPALIERAEIIREKGTNRSQFFRGLVDKYTWRDIGSSYLMSDLQA AYLWAQLEAAEKINQRRLQLWQNYYDAFLPLAQKGKVELPSVPNDCQQNAHMFYLKLRDI DQRSDFINYLKEAEIMSVFHYIPLHECPAGERFGRFEGKDVYTTKESERLARLPLFYNMS DVNQRTVISTIQSFFG >gi|316917114|gb|ADCU01000026.1| GENE 29 32297 - 33547 902 416 aa, chain + ## HITS:1 COG:YPO3858 KEGG:ns NR:ns ## COG: YPO3858 COG2244 # Protein_GI_number: 16123993 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Yersinia pestis # 1 416 1 416 418 592 80.0 1e-169 MSLAKASLWTAGSTLIKIGVGLLVVKLLAVSFGPSGVGQAGNFRQMVTVLGVLSGAGIFN GITKYVAEYHQQPERLKAVVGTSSSMILGFSTLLAVVFLLAAEPISVGLFGHADYQPIVR AVAFIQMGIAYANFFMAVLKGFRDARGNALSIIGGSLLGVVAYYLCYAFGGYPGALAGLA LVPAIVVIPASFMLFKRRHIPLSYFRLGWDKAIASNLGKFTIMALITSVTLPVAYVMMRN LLARYYSWDEVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLVSKHDISREISRSLLFV LPAVAAASFTVWLLRDFAIWLLFSNKFIAMRDLFAWQLVGDVLKVGSYVFGYLVIAKASL RFYVMTEVSQFILLTGFSHWLIPQHGALGAAQAYMATYIVYFLLCTSVFLIYRRRA >gi|316917114|gb|ADCU01000026.1| GENE 30 33544 - 34629 891 361 aa, chain + ## HITS:1 COG:no KEGG:Spro_0170 NR:ns ## KEGG: Spro_0170 # Name: not_defined # Def: 4-alpha-L-fucosyltransferase # Organism: S.proteamaculans # Pathway: not_defined # 1 360 1 360 361 585 76.0 1e-166 MTTLIHVLGSDIPHHNLTVLRFFNDVLSERVPKEQARHFMVAARDASAFSAFEQLDITVW PDKKTLAEAVITRAKADRSVRFFMHGQFNPTLWIALLTGKIKSSQVAWHVWGADLYEDAT SWKFRLFYQLRRVAQGRVGHVFATRGDLIHYQQRHPRVPASLLYFPTRMDPALTLENPQK SVNGPLTILVGNSGDRTNRHREALEAIKEQFGTDNRIIIPMGYPANNAEYIAQVKQAAEQ LFPAENVQLLTQQVAFGDYLDILRRCDLGYFIFNRQQGIGTLCLLIQFGVPFVLSRKNPF WQDLAEQHLPVLFYGDSLDANVAREAQRQMNVVDKSQIAFFNPNYIDGWQQALEIAAGEH V >gi|316917114|gb|ADCU01000026.1| GENE 31 34626 - 36002 1002 458 aa, chain + ## HITS:1 COG:no KEGG:Spro_0171 NR:ns ## KEGG: Spro_0171 # Name: not_defined # Def: putative common antigen polymerase # Organism: S.proteamaculans # Pathway: not_defined # 1 455 1 452 458 666 83.0 0 MTLAQLGGLSLVYFFSVVFVLFLTYKEFRRVRFNFNVFFSLLFLLTFYFGFPLTCMLVFR FDVTVVPVEYLLYAQLSATAFYAIYYVTYKTRLRPVQKVQTERSMFSINRVEAHLTWILL ALIAIGTVGVFFMNNGFLLFKLHSYSQIFSSDVSGVALKRFFYFFIPAMLVVYFLKQDQR AWLFFLVSTVAFGILTYVIVGGTRANIIIAFALFLFIGIVRGWITLWMLAAAGVLGIVGM FWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLGLLLQNYDKIDFQGLAPIIRDFYVF IPSWMWPGRPDQVFNTANYFTWEVLNNHSGLAISPTLIGSLVVMGGVAFIPLGAIAVGLI IKWFDWLYEKGKREANRYKAAIMQAFCFGAVFNIIVLAREGMDSFVSRVVFFCLIFGLCL LIAKLLYWLFDSAGLIRQRVRRSRMPRVTSPARKVLQG >gi|316917114|gb|ADCU01000026.1| GENE 32 36008 - 36748 652 246 aa, chain + ## HITS:1 COG:YPO3855 KEGG:ns NR:ns ## COG: YPO3855 COG1922 # Protein_GI_number: 16123990 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Teichoic acid biosynthesis proteins # Organism: Yersinia pestis # 1 246 1 246 246 394 76.0 1e-110 MQTTNPIPKYDIRGIELWGFRDMPQFLEHLFDDGELKTGTLVAINAEKVMTAEVDKPLRD LIDAAEYKYCDGISMVRAIRRKYPGAQLSRVAGADLWEALMQRAGEKGTPVFLIGGKPEI LAETEAKLRQQWNVNIVGSQDGYFKPEERTALFERIRASGAKIVTVAMGSPKQEILMRDC RNVYPGALYMGVGGTYDVFTGHVKRAPKVWQNLGLEWLYRLLAQPTRWRRQFKLLKFLGY YYGGRL >gi|316917114|gb|ADCU01000026.1| GENE 33 38382 - 39587 1169 401 aa, chain - ## HITS:1 COG:YPO3852 KEGG:ns NR:ns ## COG: YPO3852 COG3071 # Protein_GI_number: 16123987 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Yersinia pestis # 14 395 14 395 406 556 72.0 1e-158 MLKVLLLFIILIAGIVLGPMFAGHQGYVLIQTDTYNIETSVTTLVIMLILLIVVLFAIEW ILRRVFRTGARTRGWFVGRKRTRARKQTREGLMKLAEGDYTQVEKLLSRNADHAEQPVVN YLLAAEAAQQRGDELRVNQYLERASEVADSNQLPVDITRVRIQLARGENHAARHGVDALL NVAPRHPEVLRLAEQAYVRTQAYQSLLEILPSLAKANVYNDDEIQQLQLKAYIGLMNERM ANGGSLGLKSWWNDQSRKTRHETALQVAMIEHLIECNDHDTAQQILVDGLKRKFDERLVL LMPKLKSGNPEQLEKLLNQQIKQHGASALLNSTLGQLLMRHGEWQQASEAFRAALKQRPD AYDYAWLADVLDKLHRPEEAAQMRRDGLLLTLKQDQPANPA >gi|316917114|gb|ADCU01000026.1| GENE 34 39590 - 40768 976 392 aa, chain - ## HITS:1 COG:YPO3851 KEGG:ns NR:ns ## COG: YPO3851 COG2959 # Protein_GI_number: 16123986 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Yersinia pestis # 1 384 1 371 374 437 70.0 1e-122 MTEPTTPSEKVEEKNTATEHEIQPASNLNNNISSEQVAKTVKKESAKGPVLGAIAIVLVI ALGAGLYYHGHQQALAQQAENNELSDQLTALHNEQAQEKLRINALINQQNKALSVADQLQ TSQSQQLKELEAKVAAISGSDAKNWLLAQADFLVKLAGRKLWSDQDVTTAGALLKSADES LAEMNDPSLIDVRRALTEDISSLASVSQIDFDGIILKLNQLSNQVDDLRLADNNSDEAPM DEDDGEVSSSLNEWRQNLVKSWHNFMSEFITVRRRDSSAEPLLAPNQDVYLRENIRSRLL VAAQAVPRHQNEVYQQSLETVSTWVRAYFDVNDPTTKAFLSQLDELSQQSINMDVPTELK SQPLLEKLMQTRVRNLMATPSVPAAAPTAQGE >gi|316917114|gb|ADCU01000026.1| GENE 35 40790 - 41530 336 246 aa, chain - ## HITS:1 COG:YPO3850 KEGG:ns NR:ns ## COG: YPO3850 COG1587 # Protein_GI_number: 16123985 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Yersinia pestis # 1 246 1 246 249 320 68.0 1e-87 MSILVTRPSPAGEALVNRLRTLGRAAYHVPLIDFTPGSGLTTLPTQLQRLASGDLVFALS QHAVRYAHPYLQRNGMTWPRELSYFAIGRPTALRLHTASGLPVGYPRPPETSESLLLLPE LRDIAGKRALILRGNGGRELLAETLTQRGVNVTLCECYQRCAIHYNGAEQSAHWQRQGIS TLVVTSGEMLQQLYDLVPDYDRIMWLLHCRLIVVSERLATLAQALGWKDIQVAESADNDA LIRALQ >gi|316917114|gb|ADCU01000026.1| GENE 36 41527 - 42486 1041 319 aa, chain - ## HITS:1 COG:STM3938 KEGG:ns NR:ns ## COG: STM3938 COG0181 # Protein_GI_number: 16767209 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Salmonella typhimurium LT2 # 5 318 4 317 318 477 79.0 1e-134 MQENTSQPNQTLRIATRQSPLALWQAYYVRDHLQAHWPDLTVELVPMVTRGDVLLDTPLA KVGGKGLFVKELELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEREDPRDAFVSPKYA RLEDLPEGSIVGTSSLRRQCQLREIRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAAAGL KRLELEERIRYALPPEQSLPAVGQGAVGIECRLNDTRTQALLAPLNDIDTATRVSAERAM NTRLEGGCQVPIGSYSELNGDEIWLRALVGKPDGTLIIRGERRGPRAKAAELGVSLAEEL LERGAREILEDVYQGQTPR >gi|316917114|gb|ADCU01000026.1| GENE 37 42790 - 45339 1792 849 aa, chain + ## HITS:1 COG:YPO3848 KEGG:ns NR:ns ## COG: YPO3848 COG3072 # Protein_GI_number: 16123983 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate cyclase # Organism: Yersinia pestis # 1 849 1 850 850 1506 84.0 0 MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHYHHPLMPGYLDGNVPHG ICFYTPDENQQTYLHEIDFRSPGFIAADNPGQLPITGVYSMGSTSSIGQSCSSDLDIWVC HQSWLDGDERNRLQQKCTRLEKWAASLGVEVSFFLIDENRFRHNESGSLGGEDCGSTQHI LLLDEFYRTAVRLAGKRILWNMVPSEEEAHYDEYVMSLYSQGALTPNEWLDLGGLSSLSA EEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYPNAELLAITIKQRLHKGEIVSFGLD PYCMMLERVTHYLEQINDTARLDLARRCFYLKVCEKLSRSRACVGWRREILSQLVESWGW DQERIEVLDDRANWKIERVREAHNELLDAMMQSYRNLIRFARRNNLSVSASPQDIGVLTR KLYAAFEALPGKVTLVNPQISPDLSEKNLTFIHVPIGRANRTGWYLYNQAPTIDTIISHQ PLEYNRYLNKLVAWAYFNGLLTADTKLHIKSNNNLCDINKLQELVHDVSQHFPIRLPAPS PKALYSPCEIRHLAIIVNLENDPTAAFRNQVVHFDFRKLDVFSFGQQQQCLVGSIDLLYR NSWNEVRTLHFSGEQAVLEALKTILGKMHQDAAPPESVEVLCYSQHLRGLIRTRLQQLVS ECIDLRLSSTRLEPGRFKAVRVAGQTWGLFFERLSVSVQKLENAVEFYGAISNNKLHGLS IQVETEQVHLPAVVDGYASEGIIQFFFEDGDNEGFNIYILDETNRVEVYHHCEGSKEELV RDVSRFYSSSHDRFTYGSSFINFNLPQFYQIVNVDGRSQVMPFRANTLPQCNVNDDNDGT PLKQQFQLH >gi|316917114|gb|ADCU01000026.1| GENE 38 45874 - 46554 388 226 aa, chain + ## HITS:1 COG:no KEGG:SeSA_A4268 NR:ns ## KEGG: SeSA_A4268 # Name: not_defined # Def: oligogalacturonate-specific porin # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 226 1 223 223 246 57.0 6e-64 MKKIAFLLLPLLSSTASAVMVDLRHEYLDDSKANYDRVYISHRFDNGFGFAVEAKTRSGG DDQERPFSEFGDNGDEYTLSYQFSASDFVIQPGFVLETASSTAIYKPYLRVQYNINEQWW VAGRYRYEYSRNTDSGSEVDKDDGHMNRGDVWLGYNVGNLGFEINALYKKSDLVIYNNDK DDYEYNFRTSYKIDNVTPYVEVGNVSVSSSSEDRQTRFRVGMAYTF >gi|316917114|gb|ADCU01000026.1| GENE 39 46818 - 47138 373 106 aa, chain - ## HITS:1 COG:YPO3847 KEGG:ns NR:ns ## COG: YPO3847 COG1965 # Protein_GI_number: 16123982 # Func_class: P Inorganic ion transport and metabolism # Function: Protein implicated in iron transport, frataxin homolog # Organism: Yersinia pestis # 1 103 1 103 106 168 78.0 3e-42 MNDTEFHQLADKLMLNIEEAIDAYEGDADIDYETNGGVMTLTFENGSKIVINRQEPLHQI WLATKAGGYHFNFRDTGWICDRSGEEFYALLSTACSAQSGEEIKIS >gi|316917114|gb|ADCU01000026.1| GENE 40 47232 - 47435 216 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKQFRLALVAFSLFGLAGCGLKGPLYFPPADAPAAKQSQPDTQTNAPAANQGANTPSNI AGVEQGQ >gi|316917114|gb|ADCU01000026.1| GENE 41 47510 - 48334 748 274 aa, chain + ## HITS:1 COG:ECs4739 KEGG:ns NR:ns ## COG: ECs4739 COG0253 # Protein_GI_number: 15833993 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Escherichia coli O157:H7 # 1 274 2 275 275 501 85.0 1e-142 MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLSDRHNGVGFDQMLIVEPPYDPDLDFHY RIFNADGSEVGQCGNGARCFARFVRLKGLTNKREIRVSTQNGRMVLKVSDDELVTVNMGE PIFEPSKIPFKAVKAEKTYIMRAAEHTILCGAVSMGNPHCVLQVDDVETALVETIGPVLE SHERFPERVNVGFMQVINRNQIKLRVYERGAGETQACGSGACAAVAVGIQQGLLDENVQV DLPGGRLQIRWKGPDNPLFMTGPATHVYDGFIHL >gi|316917114|gb|ADCU01000026.1| GENE 42 48367 - 49071 651 234 aa, chain + ## HITS:1 COG:YPO3844 KEGG:ns NR:ns ## COG: YPO3844 COG3159 # Protein_GI_number: 16123979 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 232 1 232 234 313 71.0 1e-85 MSDIEDRVLDNLALNDAQVMEYLLQNPEFFIRNARNVEQMQVPHPVRGAVSLVEWQLNRQ RQHIFNLEEEITLLMEQASANEVLFNRLLELQGHLAGADSLSDFLQRFNRWARSLGLAGA NIRLFSDKWYLNAPSDFAHLALSRNDFEMMRIQRLGNQNHYLGTLNGPELLLVLPQAKMV GSVALSLMGEFGDLGLIIFSSRDSHHYQQGQGTVLLDQLALLMPGLISRWIERQ >gi|316917114|gb|ADCU01000026.1| GENE 43 49068 - 49979 680 303 aa, chain + ## HITS:1 COG:YPO3843 KEGG:ns NR:ns ## COG: YPO3843 COG4973 # Protein_GI_number: 16123978 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerC # Organism: Yersinia pestis # 1 303 1 303 303 445 71.0 1e-125 MSVETQTLALPVEAFLRFLRVERQLSPHTIESYHHQLMAIIEIVSASGLRDWRQLDSNQV RMITARSKRMGLEAASIALRLSSLRSFLDWQVSQGVMSVNPAKGISAPKQARHLPKNLDV DDVNRLLEIDSSDPLAVRDRTMLEVMYGAGLRLSELVGLDCRHMNMASGEVWVLGKGSKE RKLPIGRTAIHWLEQWLPLREIYDPVDDAVFVSKLGKRISVRSVQKRFAEWGVKQGVTSH INPHKLRHSFATHMLESSGDLRAVQELLGHANLTTTQIYTHLDFQHLAKVYDAAHPRAKR GKS >gi|316917114|gb|ADCU01000026.1| GENE 44 49979 - 50707 642 242 aa, chain + ## HITS:1 COG:STM3950 KEGG:ns NR:ns ## COG: STM3950 COG1011 # Protein_GI_number: 16767220 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Salmonella typhimurium LT2 # 5 242 1 238 238 302 63.0 5e-82 MYSNLHFYRPLKAIAAFTFDLDDTLYDNHPVIMRTERESLAFLQQNFEPLREWQSADWQH LRAELRAKDPEICHDVTAWRWQAVYLALTRGGFSEAQASAGADSAMEHFAHWRSQITVPE STHTTLRALAEKVPLAAITNGNADPTLFGLADYFAFILRSGPDGRSKPHDDMYRTAQQRL NVPMTHILHVGDDLTTDVAGAIRSGMQACWINDRERSLTTASDSRLLPHVEISRLDSLTA LI >gi|316917114|gb|ADCU01000026.1| GENE 45 50793 - 52955 2003 720 aa, chain + ## HITS:1 COG:uvrD KEGG:ns NR:ns ## COG: uvrD COG0210 # Protein_GI_number: 16131665 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli K12 # 1 720 1 720 720 1301 87.0 0 MDVSDLLNSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSDDQL RLLKRIVKALNLDEKQWPPRQGMWYINNKKDDGLRPQHIESYGNPVEQTWLRVYQAYQEA CDRAGLVDFAELLLRAHELWLNKPQILNHYRERFTNILVDEFQDTNRIQYAWIQMLAGNT GKVMIVGDDDQSIYGWRGAQVENIQRFLDDFPGAETIRLEQNYRSTSNILKAANALIENN DGRLGKKLWTEDGDGEKISLYCAFNELDESRFVVNRIKAWQDNGGSLNDCAILYRSNAQS RVLEEALLQVAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAYERVVNTPTRGIGD RTLDVIRQAARDRQLTLWQATHELIQEKVFAGRASGALQRFIELIDALASDTADMPLHVQ TDRVVRDSGLRQMYEQEKGEKGQTRIENLEELVTATRQYSYEDEDEDLLPLQAFLSHAAL EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY VGVTRAMRKLTITYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVTRPVKHASMG TPISANDSGFKLGQRVKHATFGEGTVINLEGSGEHSRLQIAFQGEGIKWLVAAYAKLEAM >gi|316917114|gb|ADCU01000026.1| GENE 46 53014 - 53487 460 157 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2080 NR:ns ## KEGG: Ent638_2080 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 153 1 153 158 261 81.0 4e-69 MKQITFDDLKQQSATAAAAPRLRAHRNFHPELSDPVQRLAIAMEPGTYIRPHRHPHTFEL LLPLSGRFLVLNFDENGTVTRRVVLGEECVALEMDAGTWHSVLSLDNGGVIFEVKHGGYV PVSEQDSAPWAPAEGETGTQELMTWYAQAQIGDRYCG >gi|316917114|gb|ADCU01000026.1| GENE 47 53965 - 54915 1062 316 aa, chain + ## HITS:1 COG:YPO3837 KEGG:ns NR:ns ## COG: YPO3837 COG0598 # Protein_GI_number: 16123972 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Yersinia pestis # 1 316 1 316 316 567 93.0 1e-161 MLSAFRLDNSRLSRLELDDTEDLTSSLWVDLVEPEEDERQRVQDELGQSLATRPELDDIE ASARFFEDEDGLHIHSFFYYEDAEDHAGNSTVAFTIRDGRLYTLRERELPAFRLYRMRAR NQMLADGNAYELLLDLFETKIEQLADEIENIYSDLEKLSRVIMEGHQGDEYDEALSTLAE LEDIGWKVRLCLMDTQRALNFLVRKARLPASQLEQAREVLRDIESLLPHNESLFQKVNFL MQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSYGMNFEFMPELKWSFGYPGAIGLML LAGLAPYLYFKRKNWL >gi|316917114|gb|ADCU01000026.1| GENE 48 54966 - 55856 719 296 aa, chain - ## HITS:1 COG:STM3955 KEGG:ns NR:ns ## COG: STM3955 COG2962 # Protein_GI_number: 16767225 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Salmonella typhimurium LT2 # 1 293 1 293 294 412 77.0 1e-115 MDSQQTRHGILFALAAYFIWGIAPAYFKLIQQVPPTEILTHRVIWSFFFMLVLLSLSKNW SKVRALAKTPAKIGLLALSACLIGGNWLLFIWAVNNNHMLEASLGYFINPLVNVLLGVVF LGERFRRMQWIALALAVCGVLIQLWKFGSVPVISLGLAFSFAFYGLIRKKIAVDAQTGML IETLWLLPIAAIYLFGIADSATSHLSANPISLNLLLIAAGIVTTIPLLFFTAAATRLRLS TLGFFQYLGPTLMFILAITFYNEQMTQDKLVAFGFIWAALLLFILDALYTQRKLRS >gi|316917114|gb|ADCU01000026.1| GENE 49 55991 - 56461 443 156 aa, chain - ## HITS:1 COG:YPO3835 KEGG:ns NR:ns ## COG: YPO3835 COG2050 # Protein_GI_number: 16123970 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Yersinia pestis # 1 156 1 156 156 222 70.0 3e-58 MSPTFLTREKASALISEIFVYHMPFNRSLGLELQRFEADYAELVFDSKEMLVGNAHQKIL HGGVIASVLDVCAGLVCVGSALLRHDEITQEELLARLSKMGTIDMRVDYLRPGRGERFTA SGSLLRAGNKVAVARVELHNEQNLHIASATATYMVG >gi|316917114|gb|ADCU01000026.1| GENE 50 56649 - 57527 791 292 aa, chain + ## HITS:1 COG:YPO3834 KEGG:ns NR:ns ## COG: YPO3834 COG2829 # Protein_GI_number: 16123969 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane phospholipase A # Organism: Yersinia pestis # 5 292 5 292 292 439 72.0 1e-123 MRMGWMMLAGLLAVPAAVQAEEATVKQVHDKPLVKGSIIANMLLEHDNPFTLYPYDTNYL LYTETSDVNKEAIQSYDWADDARKDEVKFQLSLAFPLIRGIAGDNSVLGMSYTQRSWWQA FNRSASSPFRETNYEPQLFVGWSTDYQLGDWTLRDIETGFNHQSNGRSDPTSRSWNRVYA RLMAQNGNFQAQIKPWYRIPESSSKDDNPDITKYMGYYEAQIGYQWGESILTAKGHYNWN TGYGGGELGWSYPLTKSVRFYTQLFSGYGESMIDYNFNQTRFGVGIMLNDFM >gi|316917114|gb|ADCU01000026.1| GENE 51 57623 - 59461 1582 612 aa, chain + ## HITS:1 COG:YPO3833 KEGG:ns NR:ns ## COG: YPO3833 COG0514 # Protein_GI_number: 16123968 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Yersinia pestis # 1 612 1 610 610 1063 83.0 0 MATAAVINAEMLAEQVLRDTFGYQQFRPGQQTIINAAIAGRDCLVVMPTGGGKSLCYQIP ALVMDGLTLVVSPLISLMKDQVDQLQANGVSAACLNSTQNREQQQEVYAGCRSGAIKLLY IAPERLMMDNFLDQLPHWNPSLLAVDEAHCISQWGHDFRPEYSALGLIKQRFPDIPVIAL TATADDATRNDIERLLSLNDPLVQVSSFDRPNIRYTLIEKFKPLDQLIRFVQEQRGKSGI IYCNSRAKVEDTTARLQSRGFSVGAYHAGLDHEHRSSVQDAFQRDDLQIVVATVAFGMGI NKPNVRFVVHFDIPRNIEAYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPEGQQ KEIERHKLNAMNAFAEAQTCRRLVLLNYFGEGRQESCGNCDICLDPPKRYDGLEDAQKAL SAIARVGQRFGIGYVVEILRGANNTRIREFGHDKLKVYGLGRDHTTEHWVSVLRQLIHLG LVTQNIAMHSALQLTESARPVLRGEVPLQLAVPRVINLKSRSSSSHASKNYGGNYDRKLF AKLRKLRKAIADEENIPPYVVFNDATLLEMAEQMPIRASELLSINGVGQRKLDRFGAPFM TLIREHVDGDDE >gi|316917114|gb|ADCU01000026.1| GENE 52 59535 - 60377 860 280 aa, chain - ## HITS:1 COG:YPO3976 KEGG:ns NR:ns ## COG: YPO3976 COG2961 # Protein_GI_number: 16124103 # Func_class: R General function prediction only # Function: Protein involved in catabolism of external DNA # Organism: Yersinia pestis # 1 280 1 280 280 492 85.0 1e-139 MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHSGAGRYQLSGEHAEKTGE YLEGIARIWQRDDIPAELEAYLSAVKHFNRGEQLRYYPGSPLIARQLLRDFDKIHLTELH PTDFPLLRNEFAKDERAKVMKADGYQQLKSQLPPLSRRGFVLIDPPYEMKTDYQDVVKGI QEGYKRFATGVYALWYPVVLRQQIKRMTRDLQDTGIRRILQIELAVRPDSDQRGMTASGM IVINPPWKLEQQMRDVLPWLHKVLVPEGTGHAKVEWIVPE >gi|316917114|gb|ADCU01000026.1| GENE 53 60601 - 62643 2074 680 aa, chain + ## HITS:1 COG:YPO3975 KEGG:ns NR:ns ## COG: YPO3975 COG0339 # Protein_GI_number: 16124102 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Yersinia pestis # 1 680 1 680 680 1174 83.0 0 MTNPLLTPFELPPFSKIKPEDIVPAVKAALADCRAEVERVVAQDAPFTWDNLCQPLAEVD DRLSRIFSPVSHLNSVQNSPELREAYEQCLPLLSEYGTWVGQHEGLYQAYRSLKEGAGFA VLTKPQKKAVENSLRDFELSGIGLPKEKQQRYGEIMARLSELGSAFSNNVLDATMGWSKL ITDEKELSGLPESAMAAAKALAESKEKEGWLLTLDIPSYLPVMTYADNRELRHEMYQAFT TRASDQGPNAGQWDNSEIMAETLQLRHELAQLLGFKSYADKSLATKMAENPQQVLAFLND LAERARPQGAQELAELREFTRKHYDVTELEAWDITYYSEKQKQHLYSISDEQLRPYFPEQ RVLSGLFEVVKRIYGITAKERHDVDVWNSEVRFFELYDETGELRGSFYLDLYAREHKRGG AWMDDCVGRLRRADGSLQKPVAYLTCNFNRPIGDKPALFTHNEVTTLFHEFGHGLHHMLT TIETAGVSGINGVPWDAVELPSQFMENWCWEPEALAFISGHYQTNEPLPQEMLDKMLAAK NYQAALFILRQLEFGMFDFRLHTEFDPAQGARILETLKEVKALVAVMPSPSWGRFPHAFS HIFAGGYAAGYYSYLWAELLSADAFSRFEEEGIFNVDTGRAFLDNILSQGGSDEPMNLFK NFRGREPKIDAMLRHYGIKG >gi|316917114|gb|ADCU01000026.1| GENE 54 62648 - 63397 736 249 aa, chain + ## HITS:1 COG:ECs4369 KEGG:ns NR:ns ## COG: ECs4369 COG0500 # Protein_GI_number: 15833623 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 245 1 245 250 377 80.0 1e-104 MSIQLLLEEGADSGALSHLAERWGLVHDPEAMMALVLTPEHLELRKLDEPKLGAIFVDFV AGAMAHRRKFGGGRGEAVAKAVGIKGSYVPSVVDATAGLGRDAYVLASVGCHVRMLERHP VVAALLDDGLQRGYADPEIGGWLQERLTLLHASSIDALKDLTPAPEVVYLDPMYPHKQKS ALVKKEMRVFQSLVGADLDADALLAPARALATKRIVVKRPDYAPPLADVPAHAATTTKNH RFDIYTPLK >gi|316917114|gb|ADCU01000026.1| GENE 55 63453 - 63731 285 92 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKLITTVMCSALLMGTGFAFAADSTSTSDKSMHNDPHKMDHTSKKPQEMKKQHLDAMQK GEAPKQDEMSKDQMDKQPMKSGDTMKKTSSGY >gi|316917114|gb|ADCU01000026.1| GENE 56 63920 - 64636 676 238 aa, chain + ## HITS:1 COG:TM1655 KEGG:ns NR:ns ## COG: TM1655 COG0745 # Protein_GI_number: 15644403 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Thermotoga maritima # 5 235 12 244 247 215 47.0 6e-56 MEGMKRILIVEDDSHIADLLALHLRDEGYQIEHAADGIAGMSMLEQGGWDALILDLMLPG IDGLDICRRARSMTRYTPIIMISARSSEVHRVLGLELGADDYVAKPFSMVELAARVKALF RRQEAMSRNLQMDAGRLDMAGLTIDPIARAVWMNQQPIDLTPREFDLLYFFAKNPDKVFS RLQLLDQVWGYQHDGYEHTVNTHINRLRIKIEADPSEPQYILTVWGSGYKFTASGAGN >gi|316917114|gb|ADCU01000026.1| GENE 57 64637 - 66106 1101 489 aa, chain + ## HITS:1 COG:BS_resE_4 KEGG:ns NR:ns ## COG: BS_resE_4 COG0642 # Protein_GI_number: 16079368 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 265 488 42 266 269 146 36.0 1e-34 MNRLSLSQRLTLVFALLLVACCAVSGWLQVRSNTQYSQQVIQRLSVNLAQHITENNKLLG PQGLNPASVKKLFDQLMSVNPSVEVYLLDKQGHIIGDAAPEGRIKRRDVNLKSINALMQG QSMPVLGDDPRSIDGQKVFSVAPLQVDGKTEGYLYVVLLGEDYARLADDARMGSAALTAF WSMGLIMLFGSLAGWLAFRWVTKPVRQLTRQVIKLEQEGLDYARVMALSVPDADVKSNEV TQLRRAFVLMAKRIAEQWKTLAEQDQQRREFIANISHDLRTPLTSLHGYLETLSVKSSSL SDAERKRYLDIALAQSLKVGRLAQELFELARLEYGVVKPQKERMSFSELLQDIFQKFELT AETRQIRLSADVPKGLPLVNADIYMMERVLTNLLDNAIRHTPSGGYIAVKLWHQDGQMWV QLTDSGTGIPEELKAGLFERPSLLSGVRRQSAGGLGLMIVKRMLQLHDGDIMLVNENEQG ACFRLMLPV >gi|316917114|gb|ADCU01000026.1| GENE 58 66178 - 66801 604 207 aa, chain + ## HITS:1 COG:YPO3832 KEGG:ns NR:ns ## COG: YPO3832 COG1280 # Protein_GI_number: 16123967 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Yersinia pestis # 1 206 2 206 206 281 74.0 8e-76 MMLFLTVALVHLVALMAPGPDFFFVSQTAVSRSRAEAMQGVVGITLGIVIWAAVALMGLH LLLMKMAWLHSIITVGGGLYLTWMGYQLLKSARAKGQLDNSDEVNVTLPARGKTFLRGFL TNLSNPKAVIYFGSVFSLFVGDNVSTPERVGLFVMIVAETFVWFSIVASVFALPVMRRGY QRLAKWIDGVAGVLFIGFGLHLIFSRS >gi|316917114|gb|ADCU01000026.1| GENE 59 66911 - 69031 1214 706 aa, chain - ## HITS:1 COG:no KEGG:Spro_0225 NR:ns ## KEGG: Spro_0225 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 35 702 27 680 685 573 51.0 1e-162 MLRLSLFAWKRRCKTLLSLSLALATTLMPFAPANACGPHFYNRLLVERNKTLLNMPEGNF AFETSLFADFDKTLPIWKKPVEIATEEEIKAQMSAKELRTANIIAQMRASISLEQADALS KGLTPEERLYTLGAVAFNLVDTSNAADYFTQVLALPENEQRVYGLAAQYSLGRALMDDYI TDSQESSLLSRADSADHVKLQLALAAFQKVIDRVKSDEPDDALLSLSSLGQQAAIHFWLG DIATSIHLYAQQSVQGDPSGSASLHIIANILMKPQNEKLLKKAIKDPLVQQLLAIQLFSD SGSGLDDEHSHEKSQITTKILALISSSAGTGFKGSDSLAAIAYRSGKYDMAATLLKNSGD SALSWWLRAKMALRNGDMKAATAAYAKTVESFPPSDRGTVDEPSLIEQRVCLVSGEQGIL ALNRGDYLQAMALFYRGKYIYRADLLDIAERVLTLDELKGFVDKNVHTIADILPKPIDED EKTYYIGPIMTPDAELREVLARRLMRAKRYDEALPYFQTTQHRQWAKQFIDNLNTAQNPK IEKRVRAQAYYQSALILRDQGLELTSYAMTPDYAIYRSIYSYVGDTYDLSWQQDKNIPND VIQPQSWITPNEAARAKAALPKTNNQFLHYRWKAAELASKSADLLSPKSQAYTAVLCHAR SWIKNRDREGGAKLYRRYTKTGTYYSQVVHSQSSFKCPKPDFTHQG >gi|316917114|gb|ADCU01000026.1| GENE 60 69018 - 70235 615 405 aa, chain - ## HITS:1 COG:no KEGG:Spro_0226 NR:ns ## KEGG: Spro_0226 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 28 405 32 405 405 405 56.0 1e-111 MVALFCSILFSLYRNPSSGTSGENLTPWDQQAYIWQRVWTPQHQDALLQSHELFSSLRVL GLQLNRDEGLRKIAVDTQMLRQDGRPVWLVVRLDGQLQHIDSSLVFENLLNQLHQWQQSG LSVTGVEIDYDSPSSKLVVYQQFLKLLRTRLPQDLQLSLTLLPTWLDSPYLPALVQQADQ SVLQVHAVLSPEKGLFDAELAASWIKRYSNVTQKPFYVALPAYGIGLAGFQDQQPVVESE SSLYIAGQMQEISVQPQTMADFLSQLRLQHIPHLKGLIWFRLPLEGDRRAWSMPTLKAVI LQQALTVQWIVDAHAQPAESGQTDALYNLVLRNKGQIDSVMPKEITISSDRCQIADAVGT YRLDSGDQPLRFIRIQSQQLRASRSQAIGWARCTQLAPGDIHVTP >gi|316917114|gb|ADCU01000026.1| GENE 61 70485 - 71822 1437 445 aa, chain - ## HITS:1 COG:STM3541 KEGG:ns NR:ns ## COG: STM3541 COG2610 # Protein_GI_number: 16766827 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Salmonella typhimurium LT2 # 1 442 1 442 446 578 80.0 1e-164 MSTFTLVFTAVGSVLLLLFLVMKARMHAFVALMLVSIGAGIFSGMPLDMIAKTMEKGMGG TLGFLAIVVALGAMFGKILHETGALDQIAAKLLSSFGEKRAHYALGIAGLVCALPLFFDV AIVLLIGVVFAVARRTNGNVVKLAIPLFAGVAGAAAFLLPGPTPMLLASQMGADYGWMIL IGLCAAIPGMILAGPLFGNFISKYVTLDLPADIQEPSLDKSKLPSFGFSLALVLFPLVLV GMKTIGARFVETGTELHKWLEFIGHPFTAILLACLVAIYGLAIRRGMSKEKVMEVCSAAI QPAGIILLVTGAGGVFKQILVDSGVGPALGNSLIGAGLPIAVACFVLAAAVRVIQGSATV ACLTTVGLVLPVIGELGYNGAQMAALSICIAGGSIVLSHVNDSGFWLFGKFTGATEAQTL KTWSIMETILGTTGAVVGMIFFAAM >gi|316917114|gb|ADCU01000026.1| GENE 62 71822 - 72391 374 189 aa, chain - ## HITS:1 COG:STM3542 KEGG:ns NR:ns ## COG: STM3542 COG3265 # Protein_GI_number: 16766828 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Salmonella typhimurium LT2 # 11 189 1 175 177 256 70.0 2e-68 MVFRPLSGVEMSEQKPQHHVFILMGVSGSGKSAVATSVAQQLGAGFLDGDFLHPRANIKK MSEGHALNDEDRTPWLKAVNDAIFAMQRTNDVSLIVCSALKKRYRDMLRDGNKNVSFIYL KGDFDLIESRLLARKGHFFKPQMLVSQFEALEEPTSDEHDVHAVDISLPLDGVVENTITT IKSVISQGS >gi|316917114|gb|ADCU01000026.1| GENE 63 72550 - 73545 781 331 aa, chain - ## HITS:1 COG:YPO3955 KEGG:ns NR:ns ## COG: YPO3955 COG1609 # Protein_GI_number: 16124083 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 1 331 1 331 331 543 81.0 1e-154 MKKKRPVLQDVADKVGVTKMTVSRYLRNPEQVSAALQTKIAVALDELGYIPNRAPDILSN STSRAIGVLLPSLTNQVFADVIRGIESVTDAHGYQTMLAHYGYRQEKEEERLLSLLSYNV DGLILSERSHTARTRKMIEVSGVPVVEMMDCVTPCIDIAVGFDNFEAARQMTQAIIDRGH RKVVYFGARQDERTVIKQHGYEAAMNHAGLEPRSVMIPRGSSYSVGSELLREALERYPDM DSIFCTNDDLAAGAAFECQRLGLRIPQDMAIAGFHGHDIGQVMTPKLASVLTPRQRMGQI AAERMLARLRGETISSQMVDVGFTLLYGGSI >gi|316917114|gb|ADCU01000026.1| GENE 64 73657 - 74574 595 305 aa, chain - ## HITS:1 COG:STM3012 KEGG:ns NR:ns ## COG: STM3012 COG1609 # Protein_GI_number: 16766314 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 288 2 306 340 116 33.0 7e-26 MATINDVSRLAQVSKATVSRVLSGSRGVKEESRLAVLKAAEALNYAPNLIAQSLSTQTTG CIGVVCAMETIQQAAHYLQALEKQMRLHKKHLLLRFATDAASVQHALSELGRGLCDAMII IGARFTLPPLDDTIVLIDCLDAEGGSRIEFDHEFAAHTASQYLVSQGRRQLALLNYDQSD AADQTLQGYRSALEFNLIPYNRQLVTQCSPSMKVALQSLLNSGVAFNGLLLRDNNDAQQA KELLQAFNRDVPRQVMIFSLDGSMSLPGQPAIEYPLESLAQRALELIVGSRDAGHSYVVR GALVA >gi|316917114|gb|ADCU01000026.1| GENE 65 74675 - 76054 964 459 aa, chain - ## HITS:1 COG:STM3775 KEGG:ns NR:ns ## COG: STM3775 COG2723 # Protein_GI_number: 16767059 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Salmonella typhimurium LT2 # 1 459 1 459 460 745 74.0 0 MTHSFPTGFWWGSASSAPQTEGNSLGSGKSATVWDHWFSQQPNRFHQQVGPQDTSTFYQH WRDDIALLKQVGHNSFRTSISWARLIPNGRGAVNPDAVSFYNQIIDEMLAQGITPFINLF HFDMPMVMQQQGGWENREVVDAYAEYAATCFHLFGDRVKHWFTFNEPVVPVEGGYLYDFH YPNVVDFKRAATVAYHTMLAHAQAVQRYRQLDQGGDIGIILNLTPSYPRSENPADVKAAN IADLMFNRSFLDPALLGKYPDELVDLLKMHHQLPECRDGDRELLAQGVVSLLGINYYQPR RIKSRDSMVNPESPFMPEWFFDNYEMPGRKMNPYRGWEIYEKGVYDILANLRTQYGNPRC FISENGMGVENEQRFVEHGQVQDDYRIEFIREHLQWVYKAIQEGSRCLGYHMWTFIDNWS WCNAYKNRYGFVQLDLATQTRKIKKSGQWFAKVSQENGF >gi|316917114|gb|ADCU01000026.1| GENE 66 76065 - 77375 1040 436 aa, chain - ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 1 425 4 428 446 427 49.0 1e-119 MSLYQSMVSVIEQKIAPLAGSIGQQKYVIAIRDGFLAALPFMIIGSFMLVFIFPPFDADT QWGFARGWLNFSLKYRAELMLPFNLSMGVMTFFISVGIGASMGKHYKLDPIMTGLLAFMA FLIVAAPYKDDHISTQYFSGQGIFTAIITAIYASEMYALLKRKNITIRLPKEVPTGVARS FEILIPVVIIVATLHPLNLLVESMTGMIIPEAIMHLLAPLVSASDSLPAILLSVLLCQIL WFAGIHGALIVTGIMNPFWMTNLALNQTALATGAPLPHIYLQGFWDHYLLIGGVGSTLPL AFLLLRSKAIHLRTIGKMGVVPSFFNINEPILFGAPIIMNPVFFLPFILVPMINATFAWT ATKLGWVAQVVSMTPWTTPAPIGASWAANWALSPVIMCLICMVLSAAMYYPFLKAYERTL LKQEEDKQANELALNS >gi|316917114|gb|ADCU01000026.1| GENE 67 77392 - 77697 395 101 aa, chain - ## HITS:1 COG:lin2831 KEGG:ns NR:ns ## COG: lin2831 COG1440 # Protein_GI_number: 16801891 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 100 1 100 101 95 52.0 1e-20 MKKIMLCCAAGMSTSLLVKKMLTSAQERGLDVEIKAFGAGEFDDQFEHYQVILLGPQVKY MLSGLAQKAEPKGIPVAAIDMMDYGMQRGDKVLDFALSLID >gi|316917114|gb|ADCU01000026.1| GENE 68 77942 - 78637 665 231 aa, chain - ## HITS:1 COG:yhhW KEGG:ns NR:ns ## COG: yhhW COG1741 # Protein_GI_number: 16131311 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Escherichia coli K12 # 1 231 1 231 231 377 78.0 1e-105 MIYIRKANDRGHANHGWLDSWHSFSFADYYDPDFMGFSALRVINDDRIAAGEGFPTHPHK DMEILTYVMEGAVAHQDSMGNKEQVNAGEFQIMSAGTGIRHSEFNAYQDRDLHLYQIWII PDQKNLTPRYEQKAFDVPQGRQLVLSPDARDGSLKVFQDMTLTRWALLKDEQSVYQMQAD RRVWIQVVKGNVSINGQHVSTADGVAIWDEAAISIHADDKAEILLFDLPAV >gi|316917114|gb|ADCU01000026.1| GENE 69 79200 - 81248 1989 682 aa, chain + ## HITS:1 COG:YPO3820 KEGG:ns NR:ns ## COG: YPO3820 COG2217 # Protein_GI_number: 16123955 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Yersinia pestis # 1 680 91 785 788 797 67.0 0 MDCPSCAKKIETAVSGIPGVNHAAVLFATEKLVVDAGHDVSKKVQTAVENAGFVLLGVNG TTPPPENSFWKEYGLLISLVVLMVVSYGIEQFSPALGRIAFIATTLVGLAPVVRQAWKLT RSGTPFAIETLMSIAAVGALFIGATEEAAMVLLLFMIGELLESYAANRARKGVSALMALV PEEAIVIENGQRKTVAVSSLLPGQIIEVAPGARMPADAELLADGVSFDESALTGESVPVE RQSGEKVAAGSLVVDRVCQLRVVSEPGNNAIDRILQLIEEADERRAPIERFLDRFSRYYT PAIMLFSLLVIVVPPLFFAQPWDTWIYRGLTMLLIGCPCALVISTPAAITSGLAAATRRG ALIKGGAALEQLGRVTTIAFDKTGTLTQGTPQVTDVVALGNVDSVRVLTLAAAVEVGSHH PLAQAIVRKVTEQKLGQLTADERQAKAGIGVEGYINGELIQVMAPSKLAQNALSEAALAQ VHELESAGKTVVVVVQAQLPVGLIALSDTLRADAVEAIAQLKRMGISGVMLTGDNPRAAA AIASQLGIDFRASLLPADKVEAVTALSRKADTAMVGDGINDAPAMKAASIGIAMGSGSDV ALETADAALTHNRLTGLPEIIALSRATHANIRQNITIALGLKAIFMVTSLLGLTGLWLAV LADSGATALVTANALRLLRKTK >gi|316917114|gb|ADCU01000026.1| GENE 70 81439 - 82560 992 373 aa, chain + ## HITS:1 COG:no KEGG:Spro_0208 NR:ns ## KEGG: Spro_0208 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 3 373 5 356 356 468 62.0 1e-130 MKNSTLLALIPVAMMSSFAFADLPESDDATQAMIDQAATPKFLLPQQNVSGESTVSATAT KLGKKKAISSASSSYLPFWGDEARALGYELPEPFGVSVSYMNIRQNINVDSIAFNGLGLG SGSNFIALPSNLFDIKVGKTRQKSETETMKLDAWVLPFMNVYGIIGHTKGSSISNVSVDS DPSNFKGLSNTLNRIISNVIHGMNQNGTLKDIDFKLDFKGTTYGAGTTLVGGYGDWFSMV DINYTQTRFDILDGSIDAFTLSPRVGYRFSIPAIDALHMGPSKLNVWVGSMYQDVQQEFK GNLNDLNMPAELQKLMAMANEDGKGRFDVKQHLQSPWNVLLGAQYEITRNFNLITEFGFA ERNSFFVSGEYRF >gi|316917114|gb|ADCU01000026.1| GENE 71 82560 - 83702 825 380 aa, chain + ## HITS:1 COG:no KEGG:SeAg_B4057 NR:ns ## KEGG: SeAg_B4057 # Name: not_defined # Def: outer membrane protein # Organism: S.enterica_Agona # Pathway: not_defined # 7 380 10 379 379 484 63.0 1e-135 MRGIAGLCLVSCLSISTLVQAGDLLPSRQQVDGWLVGLGADNQFDSSKGIDWGVMPGPFY TPELGLGVGVAVVGMYRPDETDHVSQNSTLSLSGFASSTGAFGIGLDNYSFFADDAWRFY LSGALNDMPTYYWGSGFSAGRNDSDKQKYTSQEFSAKPDLLYRIAANTYLGVGWSFSSVH AASIQDKDKGTLEREKAGTSVLSSGASATFTYDTRDFVANPRHGQLVNITYTHYAPELGS DTRFDELDSRYALYHALDEDNVLAWEVDGRFTQGDVPWNMLPLLGSNNRMRGYYEGRYRD RNVVSTQVEYRRKLDWRNGVVGWLGTGTMGPRASDLGQSRWLPSVGVGYRFEFKPRMNVR LDLGVGKGSTGFYFQVGEAF >gi|316917114|gb|ADCU01000026.1| GENE 72 83699 - 84835 723 378 aa, chain + ## HITS:1 COG:no KEGG:ETAE_0140 NR:ns ## KEGG: ETAE_0140 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 24 378 23 377 377 426 61.0 1e-118 MNVVKYGLITGILLSSSCFSQIKLPIVPDLSTSPLQQATRAWPTVEMLSAPDGLRPCCAF GYNLKAQALGIPVPLYQLNNVVEADGLGEHHYNDSLLGAVANLMGISSEQDGLLYTAHGG FIDIAHVRDTADMTLFLFSQIWPRLGQEQTIVLSEELAQRHIQLFAFTPPQNEAERFTLA AYLSSYLAFQVAAWHEIAQWYGFESVPGFSEGISAFSPEDLYSNLLGARLAASLILQGHS SSVEQFNLSMQAILPAALHQLGAVSAKDTRFQFDMLDGNWWDSHRAVPEKFLVLKRNYLT DDDRIPTPIPSESTASLRLRLPAEWAGFQMKDLGELRLLSGRSMKQLPKPDEYYTFRDFP ALALHARAEDAGQLAEMK >gi|316917114|gb|ADCU01000026.1| GENE 73 85006 - 85872 748 288 aa, chain + ## HITS:1 COG:YPO3790 KEGG:ns NR:ns ## COG: YPO3790 COG0697 # Protein_GI_number: 16123924 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Yersinia pestis # 1 280 1 280 299 363 71.0 1e-100 MILLLLTTVLWAFSFSLIGVYLAGQVDGWFAVLVRVALAALVFLPFLRFRGVQAKQALLY MALGACQLGVMYLFYYQSFLYLSVPEVLLFTIMTPIYVTLIYDLMQGNRLRWGYLFSALL AVLGALIIRYNPLSPQFLLGFGLIQGANICFAIGQVGYKRLMEISPMPQRNAFSWFYLGA LCIALPAWLIFGHHQMMPTTSLQWGILIWLGIGASGMGYFMWNYGATQVDAGTLAIMNNV LIPAGLLVNLAIWQQHPDWIRLIAGGAVIALSLWVHRRWIVRREETAR >gi|316917114|gb|ADCU01000026.1| GENE 74 85784 - 86791 672 335 aa, chain - ## HITS:1 COG:YPO3789 KEGG:ns NR:ns ## COG: YPO3789 COG0583 # Protein_GI_number: 16123923 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 332 1 317 317 506 78.0 1e-143 MIELKHLRTLQALRNTGSLAAAAAQLHQTQSALSHQFSDLEERLGYRLFVRKSQPLRFTV QGEIMLRLAEQVLPQIQQALKACNEPHQSALRIAIECHSCIQWLTPALDKFREHWPDVSV DFHSGVTFDPQPALQQGELDLVMTSDILPRSHLHYTPMFDYEVRLVLAPDHPLANKAEIT PQDLAEETLLIYPVQRQRLDVWKHFLQPAGITPALKSVDNTLLLIQMVAAHMGIAALPHW VVENVERQGLVVTKPLGEGLWSRLYSAVRDGEQNQPVTEAFIHSARRHACEHLPFVRDAE IYHSKIANGLSPHDEQSSADAPIAKARSPRHQQSA >gi|316917114|gb|ADCU01000026.1| GENE 75 87063 - 89339 2296 758 aa, chain + ## HITS:1 COG:YPO3788 KEGG:ns NR:ns ## COG: YPO3788 COG0620 # Protein_GI_number: 16123922 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Yersinia pestis # 1 755 1 755 758 1361 86.0 0 MSVINHTLGFPRVGLRRELKKAQESYWAGNISQNELLAVGKELRARHWQQQQDAGVDLLP VGDFAWYDHVLTTSLLLGNVPARHQNADGSIDLDTLFRIGRGRAPTGEPAAAAEMTKWFN TNYHYMVPEFTQGQSFSLGWQQLLEEVDEALALGHNVKPVLLGPVTYLWLGKVKGAQFDR LELLKDILPVYQQVLKALAERGIEWVQIDEPALVLELPQEWLDAYQPAYQALAGQVKLLL TTYFEGISHNLDIIRALPVQGLHVDAVHGNDDLSVLHNTLPQEWVLSIGAINGRNVWRAD VGQWFERIQPLVSQRQIWIGSSCSLLHSPIDLNVETRLDAEVKSWFAFALQKCAELALLT KAVNDPTAENLQSLTDYSAPIRARRSSTRVHNAQVEKRLAAITARDSARNQPYEERAKAQ RARFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRVDGNNYRTGISEHIKQAISEQERLGL DVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPVIIGDISRPEAITVEWA KYAQSLTDKPVKGMLTGPVTILCWSFPREDVTREIIAKQIALALRDEVEDLEKAGIGIIQ IDEPALREGLPLRRSDWQAYLEWAVDAFRLNAAVAQDDTQIHTHMCYCEFNDIMDSIAAL DADVITIETSRSDMDLLEAFKEFEYPNEIGPGVYDIHSPNVPSVEWIEDLLRKAAQNIPA ERLWVNPDCGLKTRAWPETRQSLANMVKAAQRLRELEA >gi|316917114|gb|ADCU01000026.1| GENE 76 89603 - 90457 531 284 aa, chain + ## HITS:1 COG:STM4117 KEGG:ns NR:ns ## COG: STM4117 COG2207 # Protein_GI_number: 16767382 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 3 284 4 278 283 378 67.0 1e-105 MREITHALTLWLQQPDRQGQVYFAGNQQPAPELAYQVNFPRLELVLEGQQKMKWEDVQEG AAEHILQAGDALFVPAGGWNSPAWKMPVTTLSILFGKQQLGFSLLSWDGEQYQDLGKQNV ARRGPRVGSFLLQALNELTWNQRDQSTACFIVKSLISHCLDLLGSQVQTASRSQALFDAV REHLDEFYREPLTRESVAQAFYISPNYLSHLFQKAGGIGFNEYLNYTRLEQAKHLLKRYD MKVKEVAHACGFVDSNYFCRLFRKTTERSPSEYRRQYRSQLLDK >gi|316917114|gb|ADCU01000026.1| GENE 77 90471 - 90815 319 114 aa, chain - ## HITS:1 COG:STM4116 KEGG:ns NR:ns ## COG: STM4116 COG1445 # Protein_GI_number: 16767381 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Salmonella typhimurium LT2 # 5 111 8 114 117 148 70.0 3e-36 MTIKLVAVTGCISGVAHTYMAAERLEKICQHEKWQVKIETQGALGIENALTEHDIRSADV VLLIADIELEGAERFAHCRCVHSSISTFLRLPEKTLSAVKKIITSPQDTHIDIS >gi|316917114|gb|ADCU01000026.1| GENE 78 90841 - 91728 330 295 aa, chain - ## HITS:1 COG:pflC KEGG:ns NR:ns ## COG: pflC COG1180 # Protein_GI_number: 16131790 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli K12 # 1 295 1 292 292 384 62.0 1e-107 MTSFAVRHISSSKPISAGRLSDNMARIFNIQRYSLNDGGGIRTVVFFKGCPHTCPWCANP ESMSSRIHTVRREAKCLHCQPCLNNADECPATAMERIGRDISLENLLKEVLKDDVFFRTS GGGVTLSGGEVLMQAPFALQFLTRLKELGINTAIETAGDANEEMLLKVAQRCDLVLFDLK IMDTEQAKNVLNMHQPRVLKNFARLIAAGIPVIPRVPLIPGYTLEHNNFHAILDFLAPFN LPEIHLLPFHQFGESKYQLLNRPYAMKNVATPSERDVELIRQLAINAGYHVITGG >gi|316917114|gb|ADCU01000026.1| GENE 79 91694 - 93991 1636 765 aa, chain - ## HITS:1 COG:ECs4880 KEGG:ns NR:ns ## COG: ECs4880 COG1882 # Protein_GI_number: 15834134 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli O157:H7 # 1 765 1 765 765 1346 85.0 0 MTARIERLKAAMFANPREISLERALLYTVSHQQTEGEPTILRRAKATAHILDHVEISIRA DELIAGNRTVKPRAGIVSPEMDPYWLLKELEQFPTRPQDRFEISNEDKQIYREQLFPYWE KRSMKDFINEQMTDEVKTAVKTQIFSINQTDKGQGHIIIDYPRLLKNGLGQLVGEMRSLT AQHPDNAFYQAALLLLEASQRHILRYSALAQEMSFACSDALRREELANIAEISRTIATER PRGFYQACQLFWYMNIILQYESNASSLSLGRFDQYMLPFYQTSLQQGEEPQFLQELLESL WIKCNDIVLLRSTSSARYFAGFPTGYTILLGGLTETGRSAVNPLSFLCLDAYQNTQLPQP NLGVRVNELIDRPFLLKTAETIRIGTGIPQIFNDEVVVPAFLNRGVSLEDARDYSVVGCV ELSIPGKTYGLHDIAMFNLLKVMEIVLLENEGNANLSYDDLLEQIRHKICHYVKLMAQGS NICDIGHRDWAPVPLLSSFISDCLHNGKDITEGGARYNFSGVQGIGIANLSDSLHALKGI VFDQQRLSFDELIATLKANFATPEGEQIRARLINRFEKYGNDIDVVDNISADLLRFYCKE VETYRNPRGGQFTPGSYTVSAHVPLGAVVGATPDGRYAGEQLADGGLSPMLGQDAQGPTA VLKSVSKLDNYLLSNGTLLNVKFTPSTLEGQSGLNKLADFLGAFTKLKLQHIQFNVVNAE TLRAAQAKPQDYAGLVVRVAGYSAFFVELSKEIQDDIIRRTAHQL >gi|316917114|gb|ADCU01000026.1| GENE 80 94060 - 94380 417 106 aa, chain - ## HITS:1 COG:STM4113 KEGG:ns NR:ns ## COG: STM4113 COG1445 # Protein_GI_number: 16767378 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 106 1 106 106 162 91.0 1e-40 MTKIIAVTACPSGVAHTYMAAEALERAALAKGWECKVETQGSIGLENELTAEDVASADMV ILTKDIGIKFEERFQGKTIVRVNISDAVKRADVIMGKIESHLSQTA >gi|316917114|gb|ADCU01000026.1| GENE 81 94402 - 95754 1048 450 aa, chain - ## HITS:1 COG:STM4112 KEGG:ns NR:ns ## COG: STM4112 COG1299 # Protein_GI_number: 16767377 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Salmonella typhimurium LT2 # 91 434 1 344 359 537 88.0 1e-152 MRLWDKNAKHWTNVIISQKCDDAHIPNYDGKYVSIIDKFAPDRIFPHIVQISSKCQFSPL SALRQIAYCGNLFPVMPPTAANKVHALENAMKELVQILKNTRQHLMTGVSHMIPFVVAGG ILLAVSVMLYGQGAVPNAATDPNLKKLFDIGVAGLTLMVPFLAAYIGYSIADRSALAPCA IGAWVGNSFGAGFFGAIIAGIIGGIIVFYLKKIPVPKILRSVMPIFVIPIIGTLLTAGIM MWGLGEPVGALTSSLTHWLQGMQQGSIVVLAIIMGLMLAFDMGGPVNKVAYAFMLICVAQ GVYSVVAIAAVAIAVPPLGLGFATLIGRKYYNAEEKEAGKAALLMGCVGVTEGAIPFAAA DPLRVIPSIMLGSACGAVTAALLGAQCYAGWGGLIVLPVVEGKLGYIVALAVGMVVTALC VNVLKSLAAKKQAKKTETKEDDLDLDFEIN >gi|316917114|gb|ADCU01000026.1| GENE 82 95814 - 98315 1956 833 aa, chain + ## HITS:1 COG:ptsA_1 KEGG:ns NR:ns ## COG: ptsA_1 COG1080 # Protein_GI_number: 16131785 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli K12 # 123 687 1 565 565 842 75.0 0 MPQVLKFTCDLPNGVHARPASHIETLCNQFTARIEWFNLRTGRQGDAKSALSLIGTDTLQ GDECHISIEGVDAEQAFLRISTFIKDEFPHCDASLPQSSESQEEALPQSLTHLNPNVIRA RTVCGGIAQGILLRLSTMDLKHLGELPASRGVEEEQGALDLGLSRLLKSLDLQLLDDNGT TSAVLEAHRSLLSDHSLRAQILEQIVKGASCAQAIVAAEEHFCQQFSSSASEYLRERALD VRDVCFQLLQQIYGSQRFPSQTALQQSSICMADELTPSQFLELDKSLLKGLLLSNGGSTS HTVILARSFNIPTLVGVDAEALAAYVGQEVQIDGDLGLVAVDMSPEVQRYYQLEAQVQQR IREQQRAYLSTQGRSADGVRLEVAANIAHSIEAAPAFSNGAESVGLFRTEMLYMDRAQAP SENELYNIYCQALEGAEGRSIIVRTMDIGGDKPVEYLKIPAENNPFLGYRAVRIYQEFIS LFHTQLRSILRASAHGSLKIMIPMISSMEEILWVKDQLAEVKQKLRTEQIPFDEKIPLGI MLEVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTKHYNSLNPAFLRALDHA VREVHRQGKWIGLCGELGAKGSVLPLLLGLGLDEISMSAPSIPATKARLAQLDSRECRLL LNRAMACRTSLEVEHLLAQFRMTQQDAPLISVNCISLNNDWCSKEEVIKGMTDNLLLAGR CRYPRKLEADLWAREAVFSTGLGFGFAIPHTKSEHIEQSTISVARLPQPVIWGDEEAQYI IMLTLNKHAAGDQHMRIFSRLARRIMHEEFRSALVGASDASDVANLLARELDI >gi|316917114|gb|ADCU01000026.1| GENE 83 98332 - 98994 771 220 aa, chain + ## HITS:1 COG:STM4109 KEGG:ns NR:ns ## COG: STM4109 COG0176 # Protein_GI_number: 16767375 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Salmonella typhimurium LT2 # 1 220 1 220 220 304 72.0 9e-83 MELYLDTSDIAEVARLARIFPLQGVTTNPSIIAKGGQPVWDVLPQLRDALGGSGILFAQV MGRNAEQMVTEAKQLTERVSGLVVKIPVTPEGLAAIKQLKALGIPTLGTAVYSAAQGLLA ALAGADYVAPYVNRIDAQGGDGIKTVQELQSLLEMHAPHAKVLAASFKTPRQALDCLLVG CEAITLPLDVAQQFLASPAVDAAVVKFEQDWQGAFGSLCL >gi|316917114|gb|ADCU01000026.1| GENE 84 99070 - 99831 840 253 aa, chain - ## HITS:1 COG:STM3968 KEGG:ns NR:ns ## COG: STM3968 COG2820 # Protein_GI_number: 16767238 # Func_class: F Nucleotide transport and metabolism # Function: Uridine phosphorylase # Organism: Salmonella typhimurium LT2 # 1 253 1 253 253 454 91.0 1e-128 MSNSDVFHLGLVKSDLKGATLAIVPGDPERVEKIANLMDNPVKLASHREFTSWRAELDGK SVIVCSTGIGGPSTSIAVEELAQLGIRTFLRVGTTGAIQPHINVGDVLVTTGSVRLDGAS LHFAPMEFPAVADFTCTTALVDAAKAVGATTHIGVTASSDTFYPGQERYDTFSGRVVSRF KGSMKEWQEMGVMNFEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPNAETMKKTESH AVKIVVEAARRLL >gi|316917114|gb|ADCU01000026.1| GENE 85 100170 - 101006 651 278 aa, chain + ## HITS:1 COG:ECs4760 KEGG:ns NR:ns ## COG: ECs4760 COG0412 # Protein_GI_number: 15834014 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Escherichia coli O157:H7 # 11 276 26 291 293 412 71.0 1e-115 MKTEDLITLITSPSSFSPAAGTIASTSIHTDSEGLHAGFTTIPSQGDDLPAYLAKPLHAE GPLPVVLVVQEIFGVHEHIQDICRRLAKQGYLAIAPELYFRQGEASDYTDIPSLFQHLVS KVPDKQVLGDLDHAAHWATRHGGDASRLFITGFCWGGRITWLYAAHNPQLKAGVAWYGRM VGDKTLTSPKHPVDVAAELSAPMLGLYGGLDDSIPQETVETMRQSLRAANAIAEIIVYPE AGHAFNADYRASYNAEAANDGWQRMLAWFATYGGNKVE >gi|316917114|gb|ADCU01000026.1| GENE 86 101134 - 101919 616 261 aa, chain + ## HITS:1 COG:YPO3785 KEGG:ns NR:ns ## COG: YPO3785 COG2365 # Protein_GI_number: 16123919 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Yersinia pestis # 1 260 1 276 276 330 61.0 2e-90 MTATIFLHPSLAPLEGGVNFRDMGGYLAADGRRVKRGRLFRSGALDRLTDKDLSYLQDVP IKNILDYRDADEVSTKPDVLWDAVRYINLPANPLSTEVNANLEKLTSEALESFDANAFML ELYRRLPFSNHAYQLLSTLLQSGEEGAIVQHCAVGKDRTGVGSALVLFALGADEATVMED YLLTETTLAPFRSQMLDYLSVKLNEKALGQFSYVLSAREEFLVTALDAIKARYSTIDSWL EQEYGLNMQVRSQLQQQFLEP >gi|316917114|gb|ADCU01000026.1| GENE 87 102077 - 103885 1729 602 aa, chain + ## HITS:1 COG:YPO3784 KEGG:ns NR:ns ## COG: YPO3784 COG1966 # Protein_GI_number: 16123918 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Yersinia pestis # 1 593 3 595 605 1038 91.0 0 MQHAITFVIATLCILTICYRLYGIFFVKKVLRADDNEVTPSHTFEDGKDYVPTKKWVNFG SHFAAIAAAGPLVGPVLAAQFGYLPGFLWLLIGCVVGGAVHDTVVLFASMKHQGKSLSEV AKSELGPIAGWCTGLAMLFIITITMAGLSMVVVHALERNPWGTFAVFMTIPIAIGVGLWE RVTGSMKGATYVGIAAIMACVFFGPHIQNTTFGEWLTFKATTVSLLLPAYAFFATALPVW MLLTPRGYLSSFMKIGVFGALVIGVIFINPEIQFPAVTQFIHGGGPVLAGPVWPFISITI ACGAISGFHAFIGSGTTPKQIDKWSDILPVGFGAMLAECVVGVMALIAATSLHPADYFAI NSSAEAWAGLGMDVVNLPKLSEEIGLDLYGRTGGAVTLAVGMTDIFIRVPWFSSLASYFF QFVIMFEAVFILTAVDSGTRVARYLLQDFLGDLWAPLKRTDWLPGSIFCSVIACALWGYL LNSGDINSVWALFGVSNQLMASVGLIIGATIILRLATKRAYMLTCVIPLAYLFVTVNYAG YWMIKNVYFNSAAKGYNIFNGTISIIMMVLGVIILISALRKWRELWSVRGKELRAEQTTA TA >gi|316917114|gb|ADCU01000026.1| GENE 88 104006 - 104536 436 176 aa, chain + ## HITS:1 COG:YPO3783 KEGG:ns NR:ns ## COG: YPO3783 COG0586 # Protein_GI_number: 16123917 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Yersinia pestis # 1 175 1 175 176 209 73.0 2e-54 MTLDSIIQIVVEFVRNHEHWAIPIVFILAFGESLAFLSLLLPATVILLGLGALIGESGIA FWPLWIAASTGAFIGDWVSYWVGDRYQHQVEHMWPLSRHPQMMARGHTFFERWGTWGVFI GRFFGPLRAVVPLVAGICGMPQRYFQLANLLSAILWGFAMLAPGAFGIQWLNGWLD >gi|316917114|gb|ADCU01000026.1| GENE 89 104658 - 106190 1368 510 aa, chain + ## HITS:1 COG:YPO3782 KEGG:ns NR:ns ## COG: YPO3782 COG1322 # Protein_GI_number: 16123916 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 55 496 33 473 477 587 80.0 1e-167 MDSSIFYGVAGAVVGMLVGWLIASLRIQQQRLTLEGDLRLHQQEIAQYQQEQQTLIQQRQ QQELQQREKDQELRMLHSQLAATQEKLNQQSVWRNECEQLNQELRALREVNSAQEAELRE VTIRLEETRLGAEEKQRLLVNSEQRLSAQFENLANRIFEHSGKRVEEQNRQSLNSLLSPL REQLDGFRRQVQDSFGQESRERHTLAHEIRNLQQLNAQMAREAVNLTKALKGDNKTQGNW GEVVLSRVLEASGLREGYEYQTQVSVQVGTNSRMQPDVVVRLPQGKDVVVDAKMSLVAYE RYFNAEDDMVRELALQEHVASVKGHIRQLGRKDYQQLPGLRSLDYVLMFIPVEPAFLAAI DREPELISEALRHNIMLVSPTTLLVALRTISNLWRYEHQSQNAQKIAERASKLYDKMRLF VDDMESLGQSLDKSQASYRQAMNKLAQGRGNLIGQVESFRTLGVEVKRPISPSLADEARL ENEPEDEEFADPAEQAIQQPTIRVANGLDD >gi|316917114|gb|ADCU01000026.1| GENE 90 106294 - 107049 360 251 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 28 250 1 221 221 143 34 5e-33 MVDQTPETTHFGFKTVATAEKAGKVAQVFHSVAAKYDLMNDLMSFGIHRVWKRFTIDCSG VRRGQKVLDLAGGTGDLAAKFSRIVGEQGEVVLADINDSMLKIGREKLRNLGVIGNINYV QANAEALPFPDNHFDCITIAFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPLLEPLN KAYDAYSFHILPKIGELVAHDSESYRYLAESIRMHPDQETLKSMMDDAGFENTTYFNLTG GIVALHRGYKF >gi|316917114|gb|ADCU01000026.1| GENE 91 107063 - 107680 497 205 aa, chain + ## HITS:1 COG:STM3971 KEGG:ns NR:ns ## COG: STM3971 COG3165 # Protein_GI_number: 16767241 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 6 204 3 201 201 228 58.0 4e-60 MLTPLLNPLFTGAIETALNRMLYRDRALNNARQRLTGKVLGVFVNEINSPLYLVFSDNRL DVLGAWEGDTECCVKTRLSVLPELRDRQQLTALIRSGDLVVEGDIQVVQQFIGLMDLAEW DPAELLAPYTGDVVAQGMSMFIRKGAHFVVTGSQRQRQYIGQAVTEEWRLAPGVLEAAWF SEEVDAVSHQLESLETRLSLLEDKI >gi|316917114|gb|ADCU01000026.1| GENE 92 107677 - 109311 1454 544 aa, chain + ## HITS:1 COG:YPO3779 KEGG:ns NR:ns ## COG: YPO3779 COG0661 # Protein_GI_number: 16123913 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Yersinia pestis # 1 542 1 542 543 942 85.0 0 MTPSELCRFYLIVRVFLAYGLDELIPKMRITLPLRMGRHLLFWMRNKHKDKPLGERLRLA LQELGPVWIKFGQMMSTRRDLFPPMIADQLALLQDRVAPFDGALARKQIEDSMGGPLEQW FDDFDQNALASASIAQVHTAKLKENGQEIVLKVIRPDILPIIKADVRLMYRLAGWVPKLM PDGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEGSPMLYVPEIYSDYCRENVL VMERIYGIPVSDLPALHAQNTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSFEHP ENPQYIGIDCGIVGSLNKDDKRYLAENFIAFFNRDYRKVAELHVDSGWVPRDTNIEDFEF AIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLYP QLDLWTTAKPFLETWLRDQVGIPAIIRALKEKAPFWAEKLPELPELFYDSLQQHKVLQQS VDRVFAQLDKQRNRHGRSRYLFGIGATLLLSGTILVAAKIPVWPAWIIAGGCVAWIVGWR YTRQ >gi|316917114|gb|ADCU01000026.1| GENE 93 109446 - 109715 178 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90022866|ref|YP_528693.1| ribosomal protein L25 [Saccharophagus degradans 2-40] # 1 88 3 76 83 73 46 6e-12 MGGISIWQLLIIAVIVVLLFGTNKLRTLGSDLGASIKGFKKAIGDEDKTPPSTNANNSAA PQDADFKSLSEQQPEVKKEESKSQNKEQV >gi|316917114|gb|ADCU01000026.1| GENE 94 109719 - 110273 307 184 aa, chain + ## HITS:1 COG:ECs4767 KEGG:ns NR:ns ## COG: ECs4767 COG1826 # Protein_GI_number: 15834021 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Escherichia coli O157:H7 # 1 155 1 154 171 149 64.0 2e-36 MFDIGFSELLLVMVIGLVVLGPERLPVAVRTVAGWIRALRSLAASVQNELSQELKLQELQ DSLKKAESAGLQNLTPELKASMDELKEAAESMKRSYQTQVTEPVAKAAETIHKPDVSDPE AFHDEVDADLREDERKRAEAVKVDATNAASVEPVATEDVLVSTEQQTVKAPEQPVPSHST TSDR >gi|316917114|gb|ADCU01000026.1| GENE 95 110277 - 111065 633 262 aa, chain + ## HITS:1 COG:ECs4768 KEGG:ns NR:ns ## COG: ECs4768 COG0805 # Protein_GI_number: 15834022 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 384 76.0 1e-107 MAVDDTQPLISHLIELRKRLLNSIICILVVFLALVYFSNDIYHLIASPLIKQLPQGASMI ATDVASPFFTPIKLTMMVSVFISAPMILYQIWAFVAPALYKHERRLLMPLLFSSSLLFYL GMAFAYFIVFPLAFGFFAKTAPAGVTIATDINNYLDFVMALFMAFGVSFEVPVAIILLCW SGVTTPEELKKKRPYVIVGAFVVGMLLTPPDVFSQTLLAIPMCILFEIGVFFARFYVGKR RPRDDDEDEGSEEDTDEQPKQG >gi|316917114|gb|ADCU01000026.1| GENE 96 111128 - 111910 394 260 aa, chain + ## HITS:1 COG:ZtatD KEGG:ns NR:ns ## COG: ZtatD COG0084 # Protein_GI_number: 15804431 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli O157:H7 EDL933 # 1 260 5 263 264 363 64.0 1e-100 MLDIGVNLTSGQFAKDVDQVIERARKASVNALMVTGTDVQESQRSIALAREYPAYCWATA GMHPHNASSWNSQTATQISALAAMPEVVAVGECGLDFDRNFSTPAEQERAFSAQLALAAD LNKPLFLHCRSAHDRFIALLRPWLAKVPGAVVHCFTGSREELHECLDLGLYIGITGWVCD ERRGLELRAMLPEIPTERLLLETDAPYLLPRDLETKPKSRRNEPCYLPHIVSQVAGWRQQ DVEWLKQVTENNARQLFRLA >gi|316917114|gb|ADCU01000026.1| GENE 97 111925 - 112947 1248 340 aa, chain + ## HITS:1 COG:YPO3771 KEGG:ns NR:ns ## COG: YPO3771 COG0113 # Protein_GI_number: 16123907 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Yersinia pestis # 1 340 1 340 340 620 89.0 1e-177 MSYAFPGAFPGRRLRRVRRHDFSRRLVAENVLTVDDLIYPVFVMEGKNHQEEVSSMPGVH RMTIDLLVKEAEAIAKLGVPVLSLFPVIGADKKSLHAEEAYNPDGLVQRAVRALKDAVPE LGLLTDVALDPYTTHGQDGIIDADGYVINDITKEILVRQALSHAEAGAEIVAPSDMMDGR IGAIRDQLEAQQMVNTQIMAYSAKYASCYYGPFRDALGSSGNLKGGNKKTYQMDPANSDE ALQEVAQDLQEGADMVMVKPGMPYLDMVRRVKDTFGVPTFAYQVSGEYAMHMAAIQNGWL QEKPAIMESLICFKRAGADGVLTYFAKRVAQWLHDAEMNR >gi|316917114|gb|ADCU01000026.1| GENE 98 113027 - 113515 317 162 aa, chain - ## HITS:1 COG:ECs4770 KEGG:ns NR:ns ## COG: ECs4770 COG0250 # Protein_GI_number: 15834024 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 236 67.0 1e-62 MESWYLLYCKRGQLERAKEHLSRQEIPCFTPMITLEKIVRGKRTQVKEPMFPNYMFIELD PERVHTTTVQSTRGVSHFVRFGALPVTIPFKVIKQLMMAPPTECVDPDTPAPGDTVVITS GAFEGFEAIYTEADGEKRAILLLNLLNKPVQQSVENTDFEKL >gi|316917114|gb|ADCU01000026.1| GENE 99 113769 - 114494 768 241 aa, chain + ## HITS:1 COG:ECs4939 KEGG:ns NR:ns ## COG: ECs4939 COG3340 # Protein_GI_number: 15834193 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Escherichia coli O157:H7 # 1 200 1 199 229 161 44.0 8e-40 MELFLLSNGKVSGESELLGYAKGPIQSMLLSKKIRSAVLVPYAVIRGDYDARAAELENSL GIKVTSLHHSSDPVKTIEEAECILVSGGNTWLLNQMLHEKGLVVPIQRAVREREIPYIGW SAGCNVATPSIRTTNDMPVRNSVVLPALGLFPVQINPHYIDAHLSGHMGETRDERIAEFC AINPSEYVIALREGSLLHVAGDELEYYSVKAQGFKVFRHNQETQEYFDTQALAEMVPFRC R >gi|316917114|gb|ADCU01000026.1| GENE 100 114647 - 116155 1166 502 aa, chain + ## HITS:1 COG:YPO3769 KEGG:ns NR:ns ## COG: YPO3769 COG0043 # Protein_GI_number: 16123905 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Yersinia pestis # 1 490 4 493 498 960 92.0 0 MKYRDLREFLSLLEQRGELKRISQPIDPYLEMTEIADRTLRAGGPALLFENPKGYDIPVL CNLFGTAKRVALGMGQEDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNMPTK RLNSAPCQELVWQGDDVDLGRIPVMHCWPEDAAPLISWGLTITRGPHKERQNLGIYRQQV LGKNKVIMRWLSHRGGALDFQEWCQAHPGERFPVSVALGADPATILGAVTPVPDTLSEYA FAGLLRGNKTEVVKCISNDLEVPASAEIVLEGYIEPGEMAPEGPYGDHTGYYNEIDNFPV FTVTHITQRRNPIYHSTYTGRPPDEPAVMGLALNEVFVPILQKQFPEIVDFYLPPEGCSY RMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVCDDDINARDWNDVIWAITTRMDP ARDTVMIENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIVMDEKVRTRIDA IWDELAILEDNHTDAMKSRKPD >gi|316917114|gb|ADCU01000026.1| GENE 101 116204 - 116905 744 233 aa, chain + ## HITS:1 COG:YPO3768 KEGG:ns NR:ns ## COG: YPO3768 COG0543 # Protein_GI_number: 16123904 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Yersinia pestis # 1 233 1 233 233 389 80.0 1e-108 MTTLSCKVTSVEAITDTVYRVRLVPEAPVSFRAGQYLMVEMDERDKRPFSMASTPLEKDF IELHIGASEINLYAMAVMDRILKDRVVNVDIPHGEAWLREEGDRPLVLIAGGTGFSYTRS ILMMALAQKPEREIAIYWGGRESKYLYDLAELEALQEQHPQLKVIPVVEQPEDGWNGRTG TVLSAVLQDYGSLADYDIYIAGRFEMAKIARERFCAEREAKADHMFGDAFAFI >gi|316917114|gb|ADCU01000026.1| GENE 102 117028 - 118206 1030 392 aa, chain - ## HITS:1 COG:YPO3767 KEGG:ns NR:ns ## COG: YPO3767 COG0183 # Protein_GI_number: 16123903 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Yersinia pestis # 6 392 1 387 387 641 84.0 0 MENRSIENVVVIDAVRTPMGRSKGGAYRQVRAEDLSAHLMRALLSRNPNVDAKEIDDIYW GCVQQTLEQGFNIARNAALLAELPHTVPANTVNRLCGSSMQAIHDAARAIMVGDAQISMI GGVEHMGHVPMSHGVDFHPGLSRTVAKAAGMMGLTAEMLAKMHKISREMQDEFAARSHQR AYAATTSGAFKNEIVPTAGHDADGVLKMLFNDEVIRPETTVASLSALKPAFDPVNGTVTA GSSSALSDGASAMLLMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPATQLALKRA GLSISDIGQFELNEAFAAQTLPCLKDLGLLDVLDEKVNLNGGAIALGHPLGCSGSRISTT LLNLMERRDVQFGLATMCIGLGQGIATVFERV >gi|316917114|gb|ADCU01000026.1| GENE 103 118217 - 120421 2096 734 aa, chain - ## HITS:1 COG:YPO3766_2 KEGG:ns NR:ns ## COG: YPO3766_2 COG1250 # Protein_GI_number: 16123902 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Yersinia pestis # 313 720 3 410 419 654 79.0 0 MLYQGENLHVNWLEDGIAELVFDAPAAINKLDTKTVASLGAALDVLEKQPQLRGLLVRST KAAFIVGADITEFLSLFAAPTEKLTEWLNFANSVFNRLEDLPVPTITAVNGYALGGGCEC VLATDFRIATPDIRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIGAEQALK VGLVDAVVPQDKLISGALNMLRQAIDGQLDWQAYRQPKLEPLKLSPIESLMSFTTAKGMV MQTAGKHYPAPITAVKTIEAAAGLKRTEALKLETASFVPLTRTTQARALVGIFLNDQFVK GKAKKLAQSGQVPTHAVVLGAGIMGGGIAYQSALKGVPVLMKDISEKSLQLGMNEAGKLL NKQLERGKINGLKMAQIISTIQPTLNYAGIEQAQIVVEAVVENPKIKAAVLAEAESLIKP DAVLASNTSTIPIDQLAASLQRPENFCGMHFFNPVHRMPLVEIIRGAKTSEQTIGTVVAY ATKMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQVDKVMEKQFGWPMGPAYL LDVVGIDTAHHAQAVMAQGFPQRMSKNYRDAVDVMFDAQRFGQKNGVGFYRYDQDSKGKP RKVQDEQTPLLLAEVAPSNENFSDEEIIARMMIPMINEVVRCFEEKIVASPAEADMALVY GIGFPPFHGGAFRYLDTIGTTQYVEMAQRYQHLGELYQVPAGLRAKAETNATYYPAAAPI ETDTAIGTNAAQQA >gi|316917114|gb|ADCU01000026.1| GENE 104 120624 - 121955 1198 443 aa, chain + ## HITS:1 COG:YPO3765 KEGG:ns NR:ns ## COG: YPO3765 COG0006 # Protein_GI_number: 16123901 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Yersinia pestis # 1 442 1 442 443 750 78.0 0 METLASLYSEHMETLQQRTREVLARHQLDGLLIHSGELLSLFLDDRDYPFKVNPQFKAWI PVTQVPNCWLWVDGVNKPKLWFYSPVDYWYSVEPLPEAFWTAHVEMTALRKADDIANLLP TARERVAYIGYVPQRAQTLGIKAENINPQPVLDYLHYHRAYKTGYEQACMREAQKTAVVG HQAALEAFQSGMSEFDINQAYLTATGHRDTDVPYDNIVALNEHAAVLHYTTLQHKLPSEV RSFLLDAGAEYNGYAADLTRTYAAKSDSDFAALVSDMNKEQQALIATLKCGVRYTDYHVQ MHQRLAKLLKKHHILKDISEEAAVEQGLTCPFLPHGLGHPLGLQVHDVAGFMQDEKGTHL AAPEMYPFLRCTRIMEPGMVMTIEPGLYFIDSLLAPWKEGQFSKHFDWARIDSFRPYGGI RIEDNVIFHEKSVENMTRDLHLD >gi|316917114|gb|ADCU01000026.1| GENE 105 121955 - 122569 407 204 aa, chain + ## HITS:1 COG:STM3985 KEGG:ns NR:ns ## COG: STM3985 COG1739 # Protein_GI_number: 16767255 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 5 200 4 199 204 255 66.0 3e-68 MSQPYLIPAEAFSFSEEIKKSRFITLLAHTQGSEAAKAFIAQVKSEHPDARHHCWAFVAG APDNSQLLGFSDDGEPSGTAGKPMLAQLMGSHIGEVTAVVVRYYGGIRLGTGGLVKAYGG GVQQALKLLPVERKVPQAEYTLQCDYGLLTQVETVIAQAGGEILQSDYAVEVSLTVSLPV LVVDDVAEKLRNMSRGSLQLHQTS >gi|316917114|gb|ADCU01000026.1| GENE 106 122631 - 124082 1058 483 aa, chain + ## HITS:1 COG:YPO3762 KEGG:ns NR:ns ## COG: YPO3762 COG0168 # Protein_GI_number: 16123899 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Yersinia pestis # 1 482 1 482 483 773 92.0 0 MHFRAIIRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFFVALTIGTLLWWPQRKQ KHELKPREGFLIVVLFWTVLGSVGALPFLFSERPNLSVTDAFFESFSGLTTTGATTLVGL DNLPKAILFYRQMLQWLGGMGIIVLAVAILPILGVGGLQLYRAEMPGPLKDNKMRPRIAE TAKTLWFIYVLLTVACAVALWGAGMDVFDAISHSFSTIAIGGFSTHDASIGYFNSPTINT IIAVFLLISGCNFSLHFALLSGRSLKVYWRDPEFRMFIFVQLTLVAVCTLVLWWHNVYQT GLQTVNQAFFQVVSMATTAGFTTDSIAHWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRIL LLFLQGSRELKRLVHPNAVYTIKLGNRALPERILEAVWGFFSAYALVFIISMLAIIATGV DDFSAFAAVVATLNNLGPGLGVVADNFTSMNDAAKWVLVVTMLFGRLEVFTLLVLFTPTF WRN >gi|316917114|gb|ADCU01000026.1| GENE 107 124126 - 124665 483 179 aa, chain + ## HITS:1 COG:YPO3761 KEGG:ns NR:ns ## COG: YPO3761 COG4635 # Protein_GI_number: 16123898 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism # Function: Flavodoxin # Organism: Yersinia pestis # 1 173 1 173 177 248 69.0 4e-66 MKTLVLYSSHDGQTKAIASSIASTLSETLECDVMDLALSMDINLANYQSVVIGASVRYGH FQRSLYKFTKQNVAQLNTMPSAFFAVNLTARKPEKRTPQTNAYTRKFLLATPWQPKQCAV FAGALRYPRYGWLDKAMIKLIMKMTGGETDTSKEVEYTDWQDVTRFAKDFVRLSSSAAR Prediction of potential genes in microbial genomes Time: Wed May 18 15:51:33 2011 Seq name: gi|316917084|gb|ADCU01000027.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.27, whole genome shotgun sequence Length of sequence - 35134 bp Number of predicted genes - 31, with homology - 31 Number of transcription units - 14, operones - 9 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 724 - 783 1.8 1 1 Op 1 17/0.000 + CDS 807 - 2426 1339 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) + Term 2455 - 2485 3.0 2 1 Op 2 . + CDS 2489 - 3772 1226 ## COG0151 Phosphoribosylamine-glycine ligase + Term 3783 - 3823 3.0 3 2 Op 1 . - CDS 3816 - 4469 480 ## Spro_0291 hypothetical protein - Term 4472 - 4509 4.2 4 2 Op 2 6/0.333 - CDS 4548 - 4820 366 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 4928 - 4987 3.4 5 3 Op 1 4/0.667 - CDS 5010 - 5600 612 ## COG3068 Uncharacterized protein conserved in bacteria 6 3 Op 2 4/0.667 - CDS 5675 - 6364 539 ## COG1515 Deoxyinosine 3'endonuclease (endonuclease V) 7 3 Op 3 5/0.667 - CDS 6380 - 7444 1106 ## COG0407 Uroporphyrinogen-III decarboxylase 8 3 Op 4 . - CDS 7493 - 8272 613 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding + Prom 8252 - 8311 3.0 9 4 Tu 1 . + CDS 8351 - 8866 406 ## COG3160 Regulator of sigma D + Term 8922 - 8983 10.4 + Prom 9005 - 9064 2.6 10 5 Op 1 8/0.000 + CDS 9193 - 11142 1586 ## COG0422 Thiamine biosynthesis protein ThiC 11 5 Op 2 3/0.667 + CDS 11142 - 11804 550 ## COG0352 Thiamine monophosphate synthase 12 5 Op 3 5/0.667 + CDS 11797 - 12549 394 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 13 5 Op 4 16/0.000 + CDS 12546 - 12746 232 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis 14 5 Op 5 5/0.667 + CDS 12748 - 13527 559 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 15 5 Op 6 . + CDS 13530 - 14660 728 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes + Term 14823 - 14859 3.3 - Term 14882 - 14910 1.0 16 6 Op 1 58/0.000 - CDS 14935 - 19155 4205 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit - Term 19227 - 19260 2.7 17 6 Op 2 28/0.000 - CDS 19298 - 23326 4110 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 - Prom 23457 - 23516 3.4 - Term 23576 - 23615 8.2 18 7 Op 1 47/0.000 - CDS 23655 - 24020 543 ## PROTEIN SUPPORTED gi|197286615|ref|YP_002152487.1| 50S ribosomal subunit protein L7/L12 19 7 Op 2 43/0.000 - CDS 24087 - 24584 768 ## PROTEIN SUPPORTED gi|157368524|ref|YP_001476513.1| 50S ribosomal protein L10 - Term 24828 - 24876 9.2 20 7 Op 3 55/0.000 - CDS 24914 - 25618 1083 ## PROTEIN SUPPORTED gi|22124396|ref|NP_667819.1| 50S ribosomal protein L1 21 7 Op 4 45/0.000 - CDS 25622 - 26050 694 ## PROTEIN SUPPORTED gi|132650|sp|P09763|RL11_SERMA RecName: Full=50S ribosomal protein L11 gi|47256|emb|CAA31095.1| unnamed protein product - Prom 26153 - 26212 5.2 - Term 26142 - 26186 9.1 22 8 Op 1 46/0.000 - CDS 26224 - 26769 671 ## COG0250 Transcription antiterminator 23 8 Op 2 . - CDS 26771 - 27154 460 ## COG0690 Preprotein translocase subunit SecE - Prom 27372 - 27431 3.1 + Prom 27086 - 27145 2.4 24 9 Tu 1 . + CDS 27220 - 27708 85 ## SARI_04182 hypothetical protein - Term 27388 - 27417 2.1 25 10 Tu 1 . - CDS 27442 - 28626 1667 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 28700 - 28759 6.8 - TRNA 28743 - 28818 88.7 # Thr GGT 0 0 - TRNA 28826 - 28900 64.8 # Gly TCC 0 0 26 11 Tu 1 . + CDS 29024 - 29200 84 ## gi|289176548|emb|CBJ83357.1| conserved hypothetical protein - TRNA 29025 - 29109 69.7 # Tyr GTA 0 0 - TRNA 29131 - 29206 96.1 # Thr TGT 0 0 + Prom 29276 - 29335 4.3 27 12 Op 1 . + CDS 29584 - 30126 491 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 30136 - 30176 1.4 + Prom 30172 - 30231 3.9 28 12 Op 2 . + CDS 30351 - 31298 674 ## COG1072 Panthothenate kinase + Term 31318 - 31372 9.5 - Term 31316 - 31346 4.3 29 13 Op 1 6/0.333 - CDS 31384 - 32343 691 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 30 13 Op 2 . - CDS 32340 - 33377 607 ## COG0812 UDP-N-acetylmuramate dehydrogenase - Prom 33442 - 33501 2.6 31 14 Tu 1 . - CDS 33519 - 34466 530 ## COG4607 ABC-type enterochelin transport system, periplasmic component - Prom 34492 - 34551 5.5 - 5S_RRNA 34697 - 34824 100.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. Predicted protein(s) >gi|316917084|gb|ADCU01000027.1| GENE 1 807 - 2426 1339 539 aa, chain + ## HITS:1 COG:YPO3728 KEGG:ns NR:ns ## COG: YPO3728 COG0138 # Protein_GI_number: 16123865 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Yersinia pestis # 15 539 5 529 529 931 88.0 0 MHSSSQNTSSASAYRPIRRALLSVSDKAGIVEFAQALSSRGVELLSTGGTARLLAEAGLP VTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDDIMSHHDIKPIDMVVVNLYPFAQ TVARPDCSLADAVENIDIGGPTMVRSAAKNHKDVAIVVNNRDFDAIINEMDSNEGSLTHA TRFDLAIKAFEHTAAYDGMIANYFGTMVPPYYGNTEEPSGRFPRTLNLSYIKKQDMRYGE NSHQDAAFYIEENVTEASVATANQLQGKALSYNNIADTDAALECVKEFSEPACVIVKHAN PCGVAVGGSILDAYERAYKTDPTSAFGGIIAFNRELDAETAQAIISRQFVEVIIAPHISE PALELLAAKQNVRVLACGEWNARQNGLDFKRVNGGLLVQDRDLGMVKESDLRVVTTRQPS EQEMRDALFCWKVAKFVKSNAIVYARDKMTIGIGAGQMSRVYSAKIAGIKAADEGLEVAG SVMASDAFFPFRDGIDAAASVGITCVIQPGGSIRDDEVIAAANEHGIAMIFTDMRHFRH >gi|316917084|gb|ADCU01000027.1| GENE 2 2489 - 3772 1226 427 aa, chain + ## HITS:1 COG:YPO3729 KEGG:ns NR:ns ## COG: YPO3729 COG0151 # Protein_GI_number: 16123866 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Yersinia pestis # 1 425 1 426 428 704 84.0 0 MNILIIGNGGREHALAWKAAQSPLADKVYVAPGNAGTALEPALENVDISATDISGLLAFA KSHDIGLTIVGPEAPLVIGVVDAFQAEGLKIFGPSQAAAQLEGSKAFTKDFLARHRIPTA EYRNFTDIEPAISYIRSQGAPIVIKADGLAAGKGVIVAMTLEEAEAAVHDMLAGNAFGDA GHRIVVEEFLEGEEASFIVMVDGKNVLPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVT DEIHQRVMDEVIWPTVHGMAKEGNPYSGFLYAGLMISAQGHPKVIEFNCRFGDPETQPIM LRMRSDLVELCLAGAEGKLNEKESLWDERDALGVVLAAGGYPESYRTGDVIHGLPINSPE GEKVFHAGTQLVGSDVVTQGGRVLCATALGHGIKQAQQNAYQLAEQISWEGSFYRKDIGY RAIQRTQ >gi|316917084|gb|ADCU01000027.1| GENE 3 3816 - 4469 480 217 aa, chain - ## HITS:1 COG:no KEGG:Spro_0291 NR:ns ## KEGG: Spro_0291 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 9 217 4 212 212 228 51.0 1e-58 MAALLFAAGLAVTLSGCSSDTSSPRFTATGYIADQGMMRIWRKDDAKHQPLAIMSVYSPL KGKGTIISYYAYQDGNLNLVRQTIQGGEKDVLELRLDEKGELSYMQRQIGDQRQLLTPDD IARSQYQSRHMVEISEALRVGNVRLIQGRWENSRFTNCAGETQLLKLEDWQLKWIESRAS HSSLPLGIAWLDAPEGQQLLLVANEDFCSWEPTVDTL >gi|316917084|gb|ADCU01000027.1| GENE 4 4548 - 4820 366 90 aa, chain - ## HITS:1 COG:YPO3731 KEGG:ns NR:ns ## COG: YPO3731 COG0776 # Protein_GI_number: 16123868 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Yersinia pestis # 1 90 1 90 91 140 95.0 6e-34 MNKTQLIDVIAEKADLSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRNERTG RNPQTGMEIKIAAANVPAFVSGKALKDAVK >gi|316917084|gb|ADCU01000027.1| GENE 5 5010 - 5600 612 196 aa, chain - ## HITS:1 COG:YPO3732 KEGG:ns NR:ns ## COG: YPO3732 COG3068 # Protein_GI_number: 16123869 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 196 1 196 196 335 84.0 4e-92 MLRNPIHKRLEKLESWQHLTFIASLCERMYPNYQAFCLQTGFGDPMVYRRILDLIWETLT VKDAKVNFDNQLEKLEEAIPSADDYDIYGVYPAIDACIALGEAVHSRLSGEMLEHAITVS ETSLRTVGMLEMTQAGREMTDEELKELPAMQDELDIQWEIFRLLVECEERDLELIKGLRS DLREAGVSNIGVNLAQ >gi|316917084|gb|ADCU01000027.1| GENE 6 5675 - 6364 539 229 aa, chain - ## HITS:1 COG:nfi KEGG:ns NR:ns ## COG: nfi COG1515 # Protein_GI_number: 16131828 # Func_class: L Replication, recombination and repair # Function: Deoxyinosine 3'endonuclease (endonuclease V) # Organism: Escherichia coli K12 # 1 218 3 220 225 335 72.0 5e-92 MDMKALREEQLEKASQIIRTDDLGFEQPTLIAGADVGFEQGGDVTRAAIAVLRYPSLELV EYQIARIETQMPYIPGFLSFREYPALIKAWEMLQHRPQLVVVDGQGISHPRRLGVASHFG LLADVPTIGVAKSRLCGQFASLSDSVGAIQPLNDKQEQIGWVWRSKARCNPLFISTGHRI SLPTALHFIQSCMRGYRLPEPTRWADAIASNRPAFQRWLLQHSDNNAQI >gi|316917084|gb|ADCU01000027.1| GENE 7 6380 - 7444 1106 354 aa, chain - ## HITS:1 COG:hemE KEGG:ns NR:ns ## COG: hemE COG0407 # Protein_GI_number: 16131827 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Escherichia coli K12 # 1 354 1 354 354 673 89.0 0 MTELKNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPITCKADVEKLPVPDPEDE LGYVMNAVRTIRKNLAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATMHL LLDKIADSVILYLNAQIKAGAQSVMIFDTWGGVLTPRDYREFSLNYMHKIVDGLIRENEG RRVPVTLFTKGGGQWLEAMAETGCDALGLDWSTDIADARRRVGDKVALQGNMDPSMLYAP AARIEQEVSTILEGFGHGTGHVFNLGHGIHQDVPPEHAGTFVEAVHRLSGKYHR >gi|316917084|gb|ADCU01000027.1| GENE 8 7493 - 8272 613 259 aa, chain - ## HITS:1 COG:YPO3736 KEGG:ns NR:ns ## COG: YPO3736 COG2816 # Protein_GI_number: 16123873 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Yersinia pestis # 1 257 1 257 260 405 72.0 1e-113 MEQQLKDDDTGWWVISREGKVWLPRGELPFGTAQQWQLSTKKAHQIGEWEGHPMWLLEES RSQDMTSVRQLIDVDRGLFQLVGRGVQLAEFFRSHTFCGYCGHEMYTSRSEWACMCPHCR QRYYPQIAPCIIVAIRRGDEILLAQHKRHRNGIHTVLAGFVEVGETLEEAAAREIMEESN VRIKNLRYVASQPWPFPHSLMMAFMADYAGGELKHDPKELLNANWYRYDNLPQLPPPGTV ARRLIEDTVAQCRDEAESE >gi|316917084|gb|ADCU01000027.1| GENE 9 8351 - 8866 406 171 aa, chain + ## HITS:1 COG:YPO3737 KEGG:ns NR:ns ## COG: YPO3737 COG3160 # Protein_GI_number: 16123874 # Func_class: K Transcription # Function: Regulator of sigma D # Organism: Yersinia pestis # 1 156 1 156 169 217 67.0 9e-57 MLNRLEHLTQRVGGSHELIDQWLQARKELLVAYCALVGIKPNKEKHTPLNEKALENFCHS LVDYLSAGHFHVYDRIVELVGGDDSPHMAVTKKIYPALHDNTKLIMAFHDRFTDDELNEE ECLALHDALSHIGETLAARFALEDNLIQIAYDIWQANTPAADNDDSLARPA >gi|316917084|gb|ADCU01000027.1| GENE 10 9193 - 11142 1586 649 aa, chain + ## HITS:1 COG:STM4164 KEGG:ns NR:ns ## COG: STM4164 COG0422 # Protein_GI_number: 16767418 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Salmonella typhimurium LT2 # 11 638 4 625 631 1140 86.0 0 MSMNNNETIRTPLSRREQRAEAQSFIDHLRGEAYPNSQRIYLTGSRSDIRVPMREIQLSP TLLGGSKDNPQYEPNEPIPVYDTAGPYGDPHAGLDVRSGLKPLRDRWIAERDDTESLEQL SSAYTQQRLADEGLDHLRFENLPQPRRAKSGKCVTQLHYARQGIITPEMEFIAIRENMGR ERIRGEVLRQQHPGQNFGALLPKDITAEFVRSEVAAGRAIIPSNINHPESEPMIIGRNFL VKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGT VPIYQALEKVNGIAENLNWEIFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVS RGGSIMAKWCLSHHKENFLYERFREICQICAAYDVALSLGDGLRPGSIQDANDEAQFAEL HTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGY DHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGA QIRDNAMSKARFEFRWEDQFNLALDPHTARAYHDETLPQESGKVAHFCSMCGPKFCSMKI SQEVRDYAAKQEASAPQPVEIGMAQMSEAFRAKGSEIYHTTSDLQTEKN >gi|316917084|gb|ADCU01000027.1| GENE 11 11142 - 11804 550 220 aa, chain + ## HITS:1 COG:STM4163 KEGG:ns NR:ns ## COG: STM4163 COG0352 # Protein_GI_number: 16767417 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Salmonella typhimurium LT2 # 12 211 6 205 211 285 72.0 5e-77 MAPLTHSRTAPFPSTEQRLGLYPVVDSVEWIERLLKAGVRTIQLRIKDQRENAVETDIAQ AIALGRHYQARLFINDYWQLAIKHRAYGVHLGQEDLDTADLSAISAAHLRLGLSTHDDIE MDRALSYRPSYIALGHIFPTQTKLMPSAPQGLVDLKRQVARIPDYSTVAIGGINIDRVPA VLECGVGSVAVVSAITQAQDWLAATDTLLQLIENRRANDA >gi|316917084|gb|ADCU01000027.1| GENE 12 11797 - 12549 394 250 aa, chain + ## HITS:1 COG:STM4162 KEGG:ns NR:ns ## COG: STM4162 COG0476 # Protein_GI_number: 16767416 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Salmonella typhimurium LT2 # 2 247 1 245 252 330 64.0 1e-90 MLSDQDFMRYSRQLLLEEIGPQGQEKLSTSSVLIVGLGGLGTPAAMYLAAAGIGKIILAD GDRLHISNLQRQILYRTDDLGRSKAETAKHHLRELNPQVELITLPEHLECASLAKAIAHA DLILDCSDNMPTRQAVNAACVAQAKPLISGSAVGFGGQLMVIEPPYDQGCYRCLWPDDIE PQRNCRNAGVLGPVVGVIGTLQALEAIKMLAGIPSALSGKLRLFDGRQQSWRTFSLKRSP TCPVCGGIAA >gi|316917084|gb|ADCU01000027.1| GENE 13 12546 - 12746 232 66 aa, chain + ## HITS:1 COG:STM4161 KEGG:ns NR:ns ## COG: STM4161 COG2104 # Protein_GI_number: 16767415 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Salmonella typhimurium LT2 # 1 66 1 66 66 58 51.0 2e-09 MKIMVNDEYVTLSAATSVESLLLQLGRHQQGTALALNQTILPRENWATQQLAEGDEVVVF QAIAGG >gi|316917084|gb|ADCU01000027.1| GENE 14 12748 - 13527 559 259 aa, chain + ## HITS:1 COG:YPO3742 KEGG:ns NR:ns ## COG: YPO3742 COG2022 # Protein_GI_number: 16123879 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Yersinia pestis # 1 257 63 329 333 398 77.0 1e-111 MLQIADKTFSSRLFTGTGKFSSADKMLASLHESGSQLITMAMKRVDLKSGNDAILAPLLQ LGANLLPNTSGAKTAEEAIFAAKLAREALGTHWIKLEIHPDVRYLLPDPIETLKAAEILV EEGFVVLPYCGADPVLCKRLEEVGCAAVMPLGSPIGSNQGIITRDFLQIIIEQAKVPVIV DAGIGAPSHASAAMELGADAVLVNTAIAVARDPIAMAKAFRLAVEAGRIAYQSGLGRQSF QANATSPLTGFLHTMKQDT >gi|316917084|gb|ADCU01000027.1| GENE 15 13530 - 14660 728 376 aa, chain + ## HITS:1 COG:STM4159 KEGG:ns NR:ns ## COG: STM4159 COG1060 # Protein_GI_number: 16767413 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Salmonella typhimurium LT2 # 1 375 1 375 377 651 80.0 0 METFTQRWQQLDWDDIGLRINSKTNADVERALQTFRPDREDMLALLSPAAAHYLEPMARK AQQLTRQRFGNTVGFYVPLYLSNLCANDCTYCGFSMSNRLKRKTLDAEEIERECTAIRAM GFDSLLLVTGEHQAKVGMDYFRQHLPQIRRHFSSLMMEVQPLAQDEYAELKTLGLDGVMV YQETYHPSVYAQHHLKGNKQDFFWRLETPDRLGKAGIDKIGIGALIGLSDNWRTDCFMVA EHLTWLQQTYWQSRYSISFPRLRPCTGGIEPASIMDEAQLVQTICAFRLFAPEIELSLST RESPAFRDNVVPLAINNVSAFSKTQPGGYADNHPELEQFTPHDARTPAQVANVLLSSGLQ PVWKDWDGYLGRGTHR >gi|316917084|gb|ADCU01000027.1| GENE 16 14935 - 19155 4205 1406 aa, chain - ## HITS:1 COG:ECs4911 KEGG:ns NR:ns ## COG: ECs4911 COG0086 # Protein_GI_number: 15834165 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Escherichia coli O157:H7 # 1 1405 1 1405 1407 2613 93.0 0 MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL PSRIGLLLDMPLRDIERVLYFESYVVVEGGMTNLERRQILTEEQYLDALEEFGDEFDAKM GAEAIQGLLKNMDLEAECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP VMLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLSGPKEAERIYRAG LASLHARVKVRITQTEKNAEGEWVTTTGLVDTTVGRAILWMIVPQGLPYSIVNQPLGKKA ISKMLNTCYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKVEIISEAEAE VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTELVINSKGEEERQVSFN SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR KGLADTALKTANSGYLTRRLVDVAQDLVVIEDDCGTHNGIVMTPVIEGGDVKEPLRDRVL GRVTAEEVLKPGTADILVPRNTLLNEKWCDLLEEHSVDIIKVRSVVSCETDFGVCAHCYG RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGHLKL NNAKFVLNSDKKLVITSRNTELKLIDEFGRTKESYKVPYGSVMAKGDGAEVNGGETVANW DPHTMPVVSEVSGFIRFTDIIDTQTITRQTDELTGLSSLVVLDSAERTGSGKDLRPALKI VDAKGNDVLIPGTDMAAQYFLPGKAIVQLEDGAQIHAGDTLARIPQESGGTKDITGGLPR VADLFEARRPKEPAILAEITGVISFGKETKGKRRLVITPLDGSEPYEEMIPKWRQLNVFE GERVERGDVVSDGPESPHDILRLRGVHAVTRYITNEVQDVYRLQGVKINDKHIEVIVRQM LRKATIESAGSSEFLEGEQVEFSRVKIANRELEANGKIAATYSRDLLGITKASLATESFI SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRARRKAQGEAPV VPQVSAEEATANLAELLNASMRGDDE >gi|316917084|gb|ADCU01000027.1| GENE 17 19298 - 23326 4110 1342 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 2 1342 6 1390 1392 1587 58 0.0 MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQHGLEAAFRSVFPIQ SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNFTTEQILELFFDKVVFEIRDNKLQME LVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDGITLIEVPVEYIAGKVVAKD YIDENTGELICAANMELSLDLLAKLSQAGYKRIETLFTNDLDHGAYISETIRVDPTSDRL SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLLREEIEGSGIL SKDDIIEVMRKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS LGDLDMLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRDGIVT DEIHYLSAIEEGNYVIAQANSNLDDEGRFIEDLVTCRSKGESSLFSRDQVDYMDVSTQQV VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR GGVIQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCISQMPCVNLGEPIERG DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTSIHIQELACVS RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK LLRAIFGEKASDVKDSSLRVPNSVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL TEELQILEAGLFARIHDVLVSGGVEAEKLAKLPRDRWLELGLADEAKQNQLEQLAEQYDE LKSDFEKKLDAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGEKINAMLKQQQEVAK LREFIQKAYDLGDNTRQTVDLSTFTDDEVMRLAENLKKGLPIATPVFDGAKEKEIKELLT LGGIPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMP ESFNVLLKEIRSLGINIELEDE >gi|316917084|gb|ADCU01000027.1| GENE 18 23655 - 24020 543 121 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|197286615|ref|YP_002152487.1| 50S ribosomal subunit protein L7/L12 [Proteus mirabilis HI4320] # 1 121 1 121 121 213 95 1e-54 MSISKDDILNAVSEMSVMDVVELISMMEEKFGVSAAAAVAVAAGPAEAAEEKTEFDVILK AAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKSLEEAGAEVEV K >gi|316917084|gb|ADCU01000027.1| GENE 19 24087 - 24584 768 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157368524|ref|YP_001476513.1| 50S ribosomal protein L10 [Serratia proteamaculans 568] # 1 165 1 165 165 300 93 8e-81 MALNLQDKQAIVAEVIEVAKGAHSAVIADSRGVTVDKMTELRKAGREAGVYMRVVRNTLM RRIVEGTPFECLKDTFVGPTLVAFSMEHPGAAARLFKDFAKANAKFEVKAAAFEGELIPA AQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAALRDQKEAA >gi|316917084|gb|ADCU01000027.1| GENE 20 24914 - 25618 1083 234 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|22124396|ref|NP_667819.1| 50S ribosomal protein L1 [Yersinia pestis KIM] # 1 234 1 234 234 421 92 1e-117 MAKLTKRMRVIRDKVDVTKQYDITEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVR GATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLAEQIKKGEMNFDVVIASPDA MRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHSTIGKVDF DSNQLKENLEALLVALKKAKPATAKGVFIKKISLSTTMGAGVAIEQGSLTAVAN >gi|316917084|gb|ADCU01000027.1| GENE 21 25622 - 26050 694 142 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|132650|sp|P09763|RL11_SERMA RecName: Full=50S ribosomal protein L11 # 1 142 1 142 142 271 98 3e-72 MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVIT VYSDRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKVTSAQVREIAETKAADMTGS DVEAMIRSIEGTARSMGLVVED >gi|316917084|gb|ADCU01000027.1| GENE 22 26224 - 26769 671 181 aa, chain - ## HITS:1 COG:YPO3752 KEGG:ns NR:ns ## COG: YPO3752 COG0250 # Protein_GI_number: 16123889 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Yersinia pestis # 1 181 1 181 181 336 97.0 1e-92 MSEAPKKRWYVVQAFSGFEGRVAQSLREHIKLHNMEELFGEVMVPTEEVVEIRGGQRRKS ERKFFPGYVLVQMVMEDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGD KPRPKTMFEPGEMVRVSDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEK G >gi|316917084|gb|ADCU01000027.1| GENE 23 26771 - 27154 460 127 aa, chain - ## HITS:1 COG:STM4147 KEGG:ns NR:ns ## COG: STM4147 COG0690 # Protein_GI_number: 16767401 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Salmonella typhimurium LT2 # 1 127 1 127 127 173 88.0 5e-44 MSANTDAQGSGRGLQALKWLVVAVLLIVAIVGNFLYRDVSLPLRAMAVVLIIAIAGAVAL LTTQGKATVAFAREARTEMRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVS FITGLRF >gi|316917084|gb|ADCU01000027.1| GENE 24 27220 - 27708 85 162 aa, chain + ## HITS:1 COG:no KEGG:SARI_04182 NR:ns ## KEGG: SARI_04182 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_arizonae # Pathway: not_defined # 105 162 1 58 398 88 72.0 8e-17 MGILQETNAISAVTSSKKERNQTNDPLFGTIRRTIRAHLTCNYDAKTTDEIGSSITSVEK GHQMMPFYRVSRQILFDDFSNNTCTNGTATFTDCEAQTIVHCDWVDQANNHLNVVAWHYH FHAFWQFDSTGHVSSTEVELWTITFEERSMTAAFVFAQNINF >gi|316917084|gb|ADCU01000027.1| GENE 25 27442 - 28626 1667 394 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 394 1 407 407 646 78 0.0 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGSARAFDQIDNAPEEKARG ITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHI LLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYEFPGDDTPIIRGSALKALE GEAEWEAKIVELAETLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVG EEVEIVGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVLAKPGTIK PHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIQMI VSLIHPIAMDDGLRFAIREGGRTVGAGVVAKVIE >gi|316917084|gb|ADCU01000027.1| GENE 26 29024 - 29200 84 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|289176548|emb|CBJ83357.1| ## NR: gi|289176548|emb|CBJ83357.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004] # 1 58 1 56 65 84 79.0 3e-15 MVVGEGFEPSKSETADLQSAPFGRSGTPPLGVALLDGAGYRNRTGDLLITSQLLYQLS >gi|316917084|gb|ADCU01000027.1| GENE 27 29584 - 30126 491 180 aa, chain + ## HITS:1 COG:YPO3757 KEGG:ns NR:ns ## COG: YPO3757 COG0454 # Protein_GI_number: 16123894 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Yersinia pestis # 1 179 1 180 183 241 63.0 4e-64 MKIVLINDATLPVYRKELALLLTDAVANGASLGYDTQIDHYDAECYFHSLRPLVAKGELL LWIARDEHRVVGTVQLALCQKPNGRNRAEVQKLIVHSSARRLGVGHQLMTVLEKAALQAN RGLLYLDTQAGSVAEAFYRTEGYRCMGEIPDYACTPDGQYHPTAIYYKRLFAVTQSAKAS >gi|316917084|gb|ADCU01000027.1| GENE 28 30351 - 31298 674 315 aa, chain + ## HITS:1 COG:YPO3758 KEGG:ns NR:ns ## COG: YPO3758 COG1072 # Protein_GI_number: 16123895 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Yersinia pestis # 2 315 3 316 316 562 86.0 1e-160 MKKDQSLATPYLQFNRQQWAALRNSVPLTLTEEQIANLKGINEDLSLEEVAQIYLPLSRL LNFYFSSNVRRQAVLEQFLGTNGPRIPYIIGIAGSVAVGKSTTARVLQALLSRWPEHRKV ELLTTDGFLHPNKVLQERGLMKKKGFPQSYDIQNLVRFVSEIKSGAPRVTAPQYSHLIYD IVPDSCKVIEQPDILILEGLNVLQSGMDYPHDPHRVFVSDFVDFSIYVDAPEELLQGWYI NRFLKFRQGAFSNPDSYFHHYSQLPESEAVEIATGLWKEINGLNLKQNILPTRERASLIM TKGGNHAVESVRLRK >gi|316917084|gb|ADCU01000027.1| GENE 29 31384 - 32343 691 319 aa, chain - ## HITS:1 COG:YPO3759_2 KEGG:ns NR:ns ## COG: YPO3759_2 COG0340 # Protein_GI_number: 16123896 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Yersinia pestis # 84 318 1 235 236 367 75.0 1e-101 MKDISVPLRLVNILSDGEFHSGEHLGEVLGMSRAGINKHIQTIRDWGIDVFTVPGKGYSL PAPMQLLDEDEITEQLQDGRVTVLPVVDSTNQYLLDRIHDLRSGDACVAEYQQAGRGRRG RHWFSPFGANLYLSMFWRLEQGPAAAMGLSLVIGIVMAEVLRELGAPDVKVKWPNDLYLN DKKLAGILVELTGKTGDAANIVIGAGINLSMRSPDTSIVNQQWINLQEAGVQINRNELVA RLLKRLRDTLVDFETRGLSPFVERWRELDNFIDRPVNLLIGEQKIYGIARGIDAQGALLL DRDGEIQPFIGGEISLRGA >gi|316917084|gb|ADCU01000027.1| GENE 30 32340 - 33377 607 345 aa, chain - ## HITS:1 COG:ECs4899 KEGG:ns NR:ns ## COG: ECs4899 COG0812 # Protein_GI_number: 15834153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Escherichia coli O157:H7 # 7 345 4 342 342 479 65.0 1e-135 MSNSHTSLAEFTTFGINAQAKNIITATSPDALAEAWRGAVERQEPVLILGDGSNVLFLED FIGTILLNRIKGISVADDEHSWRLHVGAGENWHELVSYSLEQGMSGLENLALIPGCAGSA PIQNIGAYGIEFQKVCEYVDVLNLRTNESFRLTADECQFGYRESVFKHSYRDGYAIVAVG LRLEKQWHPVLNYGDLAKLSPETVTPKQVFDSVCHMRMTKLPDPKKTGNAGSFFKNPVVS AAVAAQIKSEFPEAPMYPQASGEMKLAAGWLIDRCELKGFQVGGAAVHQHQALVLINLDC ATSGDVVELARAVRNRVAQKFGVWLEPEVRFISEVGEVNAVEVLS >gi|316917084|gb|ADCU01000027.1| GENE 31 33519 - 34466 530 315 aa, chain - ## HITS:1 COG:BS_yclQ KEGG:ns NR:ns ## COG: BS_yclQ COG4607 # Protein_GI_number: 16077451 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, periplasmic component # Organism: Bacillus subtilis # 50 315 48 315 317 179 38.0 4e-45 MKNISVVILTSILSLSSYSAVAKEPEKSVIAHVTSATANTLSITHAAGVTKVHKNPQRVV IFDFGTYDSLDKLGLTNRVVGLPKSIPSYIKDKVSPAVSVVGGMKEPDLKAIELLQPDLI IITGRQGGSYDALSAIAPTISLTISPKDYLMSVNKNAELLGAIFGKKEEAKNQINLLSQQ LTSIKTEKEPSQLSALTLIHNDDRFAVIHQPIIFDVLGMKPAKVIQKERADKKKRVPLTT HEIAQANPDVIFIVDRSAAIGATPLNKMQFEDAELRSTAAFKNGKVVYLTPDLWYLSGGG LESTAAQMTEVANAL Prediction of potential genes in microbial genomes Time: Wed May 18 15:51:49 2011 Seq name: gi|316917068|gb|ADCU01000028.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.28, whole genome shotgun sequence Length of sequence - 10376 bp Number of predicted genes - 15, with homology - 14 Number of transcription units - 9, operones - 3 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 801 - 1016 98 ## + Prom 795 - 854 4.7 2 2 Tu 1 . + CDS 1015 - 1413 143 ## COG3039 Transposase and inactivated derivatives, IS5 family + Term 1646 - 1681 1.3 3 3 Op 1 . - CDS 1540 - 3423 701 ## COG3451 Type IV secretory pathway, VirB4 components 4 3 Op 2 . - CDS 3433 - 3726 270 ## ROD_p2491 putative conjugal transfer protein TriB 5 3 Op 3 . - CDS 3736 - 4404 226 ## pYptb0004 TriA protein 6 3 Op 4 . - CDS 4425 - 4649 260 ## Ctu_2p00170 hypothetical protein - Term 4664 - 4699 3.2 7 3 Op 5 . - CDS 4728 - 5264 190 ## COG0250 Transcription antiterminator - Prom 5291 - 5350 7.8 + Prom 5250 - 5309 6.6 8 4 Tu 1 . + CDS 5443 - 5805 107 ## COG1396 Predicted transcriptional regulators 9 5 Tu 1 . + CDS 6300 - 7229 483 ## Ctu_3p00150 hypothetical protein + Prom 7725 - 7784 5.7 10 6 Op 1 10/0.000 + CDS 7806 - 8048 83 ## COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain 11 6 Op 2 . + CDS 8041 - 8325 238 ## COG3668 Plasmid stabilization system protein 12 7 Op 1 . - CDS 8456 - 8683 121 ## HDEF_1399 partitioning protein 13 7 Op 2 . - CDS 8723 - 9343 354 ## COG1192 ATPases involved in chromosome partitioning - Prom 9375 - 9434 6.6 + Prom 9345 - 9404 5.2 14 8 Tu 1 . + CDS 9596 - 10120 338 ## COG1040 Predicted amidophosphoribosyltransferases 15 9 Tu 1 . - CDS 10111 - 10374 198 ## COG1662 Transposase and inactivated derivatives, IS1 family Predicted protein(s) >gi|316917068|gb|ADCU01000028.1| GENE 1 801 - 1016 98 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMNPVPWLQMTNMISYQGLVRTFPKRMGINLFKIKRTFLGESRKLFWSRDRRDFLSNYAL SLLRKKCRYQK >gi|316917068|gb|ADCU01000028.1| GENE 2 1015 - 1413 143 132 aa, chain + ## HITS:1 COG:yi52_g6 KEGG:ns NR:ns ## COG: yi52_g6 COG3039 # Protein_GI_number: 16129935 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Escherichia coli K12 # 1 104 13 116 338 211 100.0 2e-55 MSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETM LRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTPSVAEQEGQLIETEAT GAPQKHHHTLNQ >gi|316917068|gb|ADCU01000028.1| GENE 3 1540 - 3423 701 627 aa, chain - ## HITS:1 COG:BMEII0028 KEGG:ns NR:ns ## COG: BMEII0028 COG3451 # Protein_GI_number: 17988372 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Brucella melitensis # 104 561 10 477 831 309 36.0 9e-84 MVTLNKALTRPAMLFGIPMVPLVIVSGAIILLAIYLTKLLLLFLPVSWFVMNQMARKDAH VFGLAFLKLKTRGNKTCNTHYGATAFLANDYDAVDITEFINTMRLNERVTLTKHIPYSSH IHENVIKTRGSDLIATWEIGGTAFECDTEENLDILSGQFNNLIKSFEGRPVTFYVHNIRE TYHDHFDGHSGNDFADTVSERYYSTIENHPFRHNRLFFTACYMPFVGLDKVERKRMSDGQ KQHALDSALKEMLEICQTVGTSLSRFTANQLGAYEENGRVFSSQLSFYRRLLSGVWQKTA VTRTPFYETLGTTDLFFTGDAGQSNNVNGKTFFRGLEVKDYAPESFTGIMNVLLYAPCDY VITQSFTCMAKDEAQKHIKQTVKRLRSTEDDAISQQEDLFVALDMLQAGHIAFGKYHFSL MVSAPGTERLIKDTNSLINAFTDLGITPTLSTLSLPAAYLAQMPGVYTLRPRLVPISSQN FAELASFHNFYTGKRDKNPWGEALCVLKTPSGGAYYMNLHNSMLNKDDFNEKNLGNTSVI GTAGSGKTMLMAFIQVMMQKYRQPRSFSPQAKTQRLRGLRANDAKNHANSVSSLFILKLI GTAFTATSVVMVGLRDGSAWKKEIILR >gi|316917068|gb|ADCU01000028.1| GENE 4 3433 - 3726 270 97 aa, chain - ## HITS:1 COG:no KEGG:ROD_p2491 NR:ns ## KEGG: ROD_p2491 # Name: triB # Def: putative conjugal transfer protein TriB # Organism: C.rodentium # Pathway: Bacterial secretion system [PATH:cro03070] # 19 97 30 108 108 86 58.0 3e-16 MKTLRSIKNAPAYLAAVAASAAMSSPAFADGFAKAETLLEKISSGLTGLAIVTITIAVIW VGYKVLWDGKSLHDCKGIIIGGILIASGAEIGALLMS >gi|316917068|gb|ADCU01000028.1| GENE 5 3736 - 4404 226 222 aa, chain - ## HITS:1 COG:no KEGG:pYptb0004 NR:ns ## KEGG: pYptb0004 # Name: triA # Def: TriA protein # Organism: Y.pseudotuberculosis # Pathway: Bacterial secretion system [PATH:yps03070] # 1 221 1 201 205 248 57.0 1e-64 MISSAVLLTLAMQCAPTIHPDTSHDVARVESGLNPFAIGVVGQKKGLFPSNINDALDHID QLKAKGKNYSVGLMQINQANFSRYGVTAKQLFNPCTNLTVFEKIITDCYLRGGTLKRALS CYYSGNFDTGQKPEAAFSKTSYVQRMGYKPAQKYVVPSSKADQEKQNATPGNAAPTPQIR YPKGIVRGDLITSDAQASPNQATPVSFPSQVVRGEFVVTTSK >gi|316917068|gb|ADCU01000028.1| GENE 6 4425 - 4649 260 74 aa, chain - ## HITS:1 COG:no KEGG:Ctu_2p00170 NR:ns ## KEGG: Ctu_2p00170 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 1 65 1 64 71 76 64.0 3e-13 MPKKKLGEPTSTSVIYIGQQRYQLLAKHAREISYLSNTNIKTTTFLHYLIDEFTKKGHAS LLNQLQKAPPAEEE >gi|316917068|gb|ADCU01000028.1| GENE 7 4728 - 5264 190 178 aa, chain - ## HITS:1 COG:YPO3770 KEGG:ns NR:ns ## COG: YPO3770 COG0250 # Protein_GI_number: 16123906 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Yersinia pestis # 28 126 1 97 162 65 35.0 5e-11 MFMSTLVLVSAKLARRKMGACAHKDGNMNLWYVLYCKAQDVGKITKRVNGLGVSVFCPRY VRVSHRTDCNSVRIEEKVLFPNYLFLSFDINKIHTSTISSIPGAVGFIRFGSDACTVPQK VISAIECARLIALNNDDQAIECRNISSTLLLKIQEISLIKSIEQRQVAFSHLLQSSNP >gi|316917068|gb|ADCU01000028.1| GENE 8 5443 - 5805 107 120 aa, chain + ## HITS:1 COG:STM2748 KEGG:ns NR:ns ## COG: STM2748 COG1396 # Protein_GI_number: 16766060 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 84 23 106 118 68 41.0 3e-12 MVPKRLREAREAAGISQEKLSQLIDIDGKNSRSRLSSYEVGRTEPPFSLVVKIARLLDYP EYYFYTVDDDMAKNMLEVHRNRVNPEENLQYYTLEENKKLRKQNEEARKLLKQLNECLKD >gi|316917068|gb|ADCU01000028.1| GENE 9 6300 - 7229 483 309 aa, chain + ## HITS:1 COG:no KEGG:Ctu_3p00150 NR:ns ## KEGG: Ctu_3p00150 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 17 308 10 301 303 381 65.0 1e-104 MLAGVNNQTNSTQQNPDKRHRGEHSTACKCPLPLYVRPAHYKPLSKQHGRALRNLMSQDK TSGAWVIRRRVSADPIFTFLRPVADRKRAFREVRRRLLDALFVLFVNKADLATGIVTINI TKLAEELSPRNEDGQIIPETAVTVSRVSRLIDELARFGIVLAPETEWDYVNGCRFPKHII MTEEGWRLTGVDMDKLRAEQEERLRAIEDGILQPGEAMTVKEARKRWYERCRHQTILSRR TRAIEGKQRRKLAELPFDERKRQVAERIFRDMKGDIHHLTPQQFEKMVWTQLYQLELVNM EQPGTAPPH >gi|316917068|gb|ADCU01000028.1| GENE 10 7806 - 8048 83 80 aa, chain + ## HITS:1 COG:ECs0461 KEGG:ns NR:ns ## COG: ECs0461 COG3609 # Protein_GI_number: 15829715 # Func_class: K Transcription # Function: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 80 1 80 80 92 76.0 2e-19 MARTTSVTIGEQLDSFISRLIDSGRYGSASEVMRSALRLLEQQETNDEVVRQAVIAGLES GESSLSLRDIAAQRKLRHRV >gi|316917068|gb|ADCU01000028.1| GENE 11 8041 - 8325 238 94 aa, chain + ## HITS:1 COG:ECs0462 KEGG:ns NR:ns ## COG: ECs0462 COG3668 # Protein_GI_number: 15829716 # Func_class: R General function prediction only # Function: Plasmid stabilization system protein # Organism: Escherichia coli O157:H7 # 1 92 1 92 93 110 57.0 7e-25 MYKLTERAAEDFAGIYDYTLLKFGEAQADHYTDALEAFFETLAGMPDMGRDYNTVPGVMR IEFQRHAIFYTVRDTDILIARILHQQMNHKRHLL >gi|316917068|gb|ADCU01000028.1| GENE 12 8456 - 8683 121 75 aa, chain - ## HITS:1 COG:no KEGG:HDEF_1399 NR:ns ## KEGG: HDEF_1399 # Name: not_defined # Def: partitioning protein # Organism: H.defensa # Pathway: not_defined # 1 73 1 74 76 107 82.0 1e-22 MALTKQHTSKTMSFGEHRDLEKVVNSTPTGKQKRVNVNFDEEIHIRFKAACAKQGTSITD VIKDLVDNWLKENDS >gi|316917068|gb|ADCU01000028.1| GENE 13 8723 - 9343 354 206 aa, chain - ## HITS:1 COG:RSc2605 KEGG:ns NR:ns ## COG: RSc2605 COG1192 # Protein_GI_number: 17547324 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Ralstonia solanacearum # 3 202 2 208 212 94 30.0 1e-19 MKIIAFLNPKGGSGKTTAAINVSSCLASSGKKIAVVDTDPQMSLTNWNKAEKAAFDVYTA ASEKDVYQVRKDLAEYDFVIIDGAGSLSVITSAAVMVSDLIIIPVTPSPLDFSAAGSVVT VLEAQAYNRPVEARFLITRKIEQATMLNVLKDSIAQTGIKPFKTAITQRQSYVKSVMEGE SVFDTNDGAAKGEIAILTREILESFE >gi|316917068|gb|ADCU01000028.1| GENE 14 9596 - 10120 338 174 aa, chain + ## HITS:1 COG:NMA0604 KEGG:ns NR:ns ## COG: NMA0604 COG1040 # Protein_GI_number: 15793594 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Neisseria meningitidis Z2491 # 7 151 4 147 187 87 32.0 1e-17 MEVNIKDITGNWDHGVVLDKHSKFSVVTGQNEWGHNIYDTTRTEVGEAVYQLKYKSDWTQ VQPLAKYLYAKAYPLFQKVGFILPMAASNVRARQPVTEVAQALAQLAGVPCFDDLLLKAP GGVSLKNLNTKQEKVDAIGGSFSINPVISNEGKCIRRQLLLPGHVFNVLMLHQT >gi|316917068|gb|ADCU01000028.1| GENE 15 10111 - 10374 198 87 aa, chain - ## HITS:1 COG:YPO0963 KEGG:ns NR:ns ## COG: YPO0963 COG1662 # Protein_GI_number: 16121266 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Yersinia pestis # 1 87 32 117 118 120 75.0 5e-28 KTLCKLLKLLSGFSVAFWCTDGYRAYNEKLPKAKHIVGKLYTQRIERENLTLRNRLKRLN RKTLGYSKLAEMHDRIIGTFIEREHYV Prediction of potential genes in microbial genomes Time: Wed May 18 15:52:07 2011 Seq name: gi|316917065|gb|ADCU01000029.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.29, whole genome shotgun sequence Length of sequence - 2119 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 137 - 430 197 ## EpC_pEp050050 mobilization protein 2 1 Op 2 . + CDS 420 - 1955 431 ## ASA_pAsa205 mobilization relaxase Predicted protein(s) >gi|316917065|gb|ADCU01000029.1| GENE 1 137 - 430 197 97 aa, chain + ## HITS:1 COG:no KEGG:EpC_pEp050050 NR:ns ## KEGG: EpC_pEp050050 # Name: mobC # Def: mobilization protein # Organism: E.pyrifoliae # Pathway: not_defined # 1 90 6 94 107 72 45.0 3e-12 MTATEHQRLLERCDRIHLAEWLRQLGLGEHTARKRPVPEVAPELLRLVSGMGNNLNQIAR RLNQSDSLTPSERVSLLSILNSLDRQLGELLEQHRAR >gi|316917065|gb|ADCU01000029.1| GENE 2 420 - 1955 431 511 aa, chain + ## HITS:1 COG:no KEGG:ASA_pAsa205 NR:ns ## KEGG: ASA_pAsa205 # Name: mobA # Def: mobilization relaxase # Organism: A.salmonicida # Pathway: not_defined # 1 487 1 460 486 324 45.0 4e-87 MLVKIHSRGSGSGSGPVDYLLGKDRQRDQATVLRGEPDRVCELIDSCDFARSYTSGVLSF QEPDIADSEKSRLMDEWEHTLMTGLDRDQYNCLWVEHRDKGRLELNFVIPNIELQSGKRL QPYFDRADRPRVNAWQTLTNDRLGLRDPNDPLNRRALTQASDLPRDKQQAAEKITDGLMN LMQQGAIRSREDVVKQLESYGLSIARETKSSISIADPDGGRNIRLKGMIYERDFKFSEGL RGEIEAAGAGYRAEREARVREAGNVYQRGLEIKFAEHQQRYPRAERQTDEHSQTLHPERS GLDIPVRRTADHDTGRDNLVSGNGHHFAPERNGQLQSATGEPESPERRRGSDLQGRQAEE HLSGGTAGESTWHRDIHIESRKHRDEVHREIIPSDATETPQRVFITEDRQNHDRDGKAAS ERIRKFTDKLRATATGVAGQLQQFATHVRDYLAGAGAQRQGMSELEQSGERLVRAGRTLE QRSEPINTLVKQHERELQKERQATCYHGLSR Prediction of potential genes in microbial genomes Time: Wed May 18 15:52:16 2011 Seq name: gi|316917061|gb|ADCU01000030.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.30, whole genome shotgun sequence Length of sequence - 1900 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 4 - 177 204 ## HDEF_1138 hypothetical protein 2 1 Op 2 . + CDS 179 - 463 368 ## COG2944 Predicted transcriptional regulator + Prom 465 - 524 2.0 3 2 Tu 1 . + CDS 659 - 1588 495 ## ETA_32360 replication initiation protein A + Term 1791 - 1831 3.1 Predicted protein(s) >gi|316917061|gb|ADCU01000030.1| GENE 1 4 - 177 204 57 aa, chain + ## HITS:1 COG:no KEGG:HDEF_1138 NR:ns ## KEGG: HDEF_1138 # Name: not_defined # Def: hypothetical protein # Organism: H.defensa # Pathway: not_defined # 1 57 54 110 110 95 94.0 5e-19 MATGNQGKSGSARVIYFLATAEVIYLVMAYPKSTKDSLTDAEKAELKKLTQRLKDEV >gi|316917061|gb|ADCU01000030.1| GENE 2 179 - 463 368 94 aa, chain + ## HITS:1 COG:STM4033 KEGG:ns NR:ns ## COG: STM4033 COG2944 # Protein_GI_number: 16767298 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 16 86 6 76 84 58 38.0 4e-09 MSFFDELKASLEEAVEIKNGTKSPARVTRYEMADIKAIRENLNITQSEMAKVLGTSLDTI KSWETGRRNPTGLAAKVLATIQANPKFFHELAAH >gi|316917061|gb|ADCU01000030.1| GENE 3 659 - 1588 495 309 aa, chain + ## HITS:1 COG:no KEGG:ETA_32360 NR:ns ## KEGG: ETA_32360 # Name: not_defined # Def: replication initiation protein A # Organism: E.tasmaniensis # Pathway: not_defined # 1 250 1 250 291 477 90.0 1e-133 MNNAALELFNDRLPHKPYFSDDLHFGVRIAGKERAILAKYIQFNQPHAMFWLGFDVDRIG AAIDWSDRNAPAPTLTITNPENGHAHLLYALKTSIRTAPDGKMKPLRYAAAVENALRKKL GADTGYSGLICKNPNHSHWKIAVWQPELYTLDWLADSLDLNAANDKEIVADYGLGRNCTL FDKTRKWAYRAIRQGWPEYEQWLQACHERACAYNLQFAAPLDKNEVTGIARSIAKWTSKN FSEASFIEYIKKTHASDIQKKRGAKGGVLSHSGGRPKGSCNVDSYNFRKDWESLGISRAT FYRRMKNDK Prediction of potential genes in microbial genomes Time: Wed May 18 15:52:22 2011 Seq name: gi|316917058|gb|ADCU01000031.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.31, whole genome shotgun sequence Length of sequence - 1637 bp Number of predicted genes - 3, with homology - 2 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 224 86 ## EpC_pEp050050 mobilization protein - Term 741 - 783 0.1 2 2 Tu 1 . - CDS 869 - 1105 115 ## - Prom 1144 - 1203 8.6 + Prom 1153 - 1212 3.1 3 3 Tu 1 . + CDS 1256 - 1633 65 ## Smlt0644 putative transmembrane sulfatase protein Predicted protein(s) >gi|316917058|gb|ADCU01000031.1| GENE 1 2 - 224 86 74 aa, chain - ## HITS:1 COG:no KEGG:EpC_pEp050050 NR:ns ## KEGG: EpC_pEp050050 # Name: mobC # Def: mobilization protein # Organism: E.pyrifoliae # Pathway: not_defined # 1 63 6 68 107 68 53.0 7e-11 MTATEHQRLLERCDRIHLAEWLRQLGLGEHTARKRPVPEVAPELLRLVSGMGNNLNQIAR RLNQSDSLTPSERV >gi|316917058|gb|ADCU01000031.1| GENE 2 869 - 1105 115 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIADIIKTANGTTFTFHPILFISDMFASASGGMYSPIDMTLPICTLIIIANISINIKANP LNMLVIFMCSIVNIKAII >gi|316917058|gb|ADCU01000031.1| GENE 3 1256 - 1633 65 125 aa, chain + ## HITS:1 COG:no KEGG:Smlt0644 NR:ns ## KEGG: Smlt0644 # Name: not_defined # Def: putative transmembrane sulfatase protein # Organism: S.maltophilia # Pathway: not_defined # 1 109 178 291 571 91 40.0 8e-18 MSPYEMDSIKLKYKKNEVTKNSYSHALINGDRKNILVIFVEGMSSLVISKDLTPNIYKLR ENGISFSNYYNHTAATFRGLRGQLTSSYQMTGGYYKDKTGIGQSNKRDIDTKFNNMITLQ INNLT Prediction of potential genes in microbial genomes Time: Wed May 18 15:52:33 2011 Seq name: gi|316917057|gb|ADCU01000032.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.32, whole genome shotgun sequence Length of sequence - 4001 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 6 - 82 90.5 # Asp GTC 0 0 + Prom 87 - 146 4.8 1 1 Tu 1 . + CDS 167 - 382 68 ## YPK_3346 hypothetical protein - 5S_RRNA 168 - 295 100.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. - LSU_RRNA 399 - 3306 96.0 # CP000826 [D:300559..303468] # 23S ribosomal RNA # Serratia proteamaculans 568 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia. - TRNA 3556 - 3631 57.0 # Glu TTC 0 0 2 2 Tu 1 . + CDS 3738 - 3968 90 ## B21_03839 hypothetical protein - 5S_RRNA 3771 - 3832 93.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + 5S_RRNA 3899 - 3998 91.0 # AE017194 [D:4654188..4655695] # 5S ribosomal RNA # Bacillus cereus ATCC 10987 # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group. Predicted protein(s) >gi|316917057|gb|ADCU01000032.1| GENE 1 167 - 382 68 71 aa, chain + ## HITS:1 COG:no KEGG:YPK_3346 NR:ns ## KEGG: YPK_3346 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis_YPIII # Pathway: not_defined # 1 44 118 161 180 81 90.0 8e-15 MPGSSLLSHGETPHYHRRYGVSLLSSAWGQVGPPRYRRQANSVNQPAAYIAILSQLIQSL NKLTLRLSLST >gi|316917057|gb|ADCU01000032.1| GENE 2 3738 - 3968 90 76 aa, chain + ## HITS:1 COG:no KEGG:B21_03839 NR:ns ## KEGG: B21_03839 # Name: ybl205 # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 11 76 1 66 66 125 96.0 3e-28 MWTLHLTLSLGKEVIQPQVPLRLPCYDFTPVMNHKVVSALPKVKLPTSFATHSHGVTGGV YKARERIHRSILIYDY Prediction of potential genes in microbial genomes Time: Wed May 18 15:52:41 2011 Seq name: gi|316917056|gb|ADCU01000033.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.33, whole genome shotgun sequence Length of sequence - 2328 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - SSU_RRNA 110 - 1628 99.0 # AY572428 [D:1..1519] # 16S ribosomal RNA # Hafnia alvei # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Hafnia. Prediction of potential genes in microbial genomes Time: Wed May 18 15:52:42 2011 Seq name: gi|316917052|gb|ADCU01000034.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.34, whole genome shotgun sequence Length of sequence - 2017 bp Number of predicted genes - 3, with homology - 2 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 21 - 344 135 ## ECO111_p5-03 putative mobilization protein 2 - Prom 481 - 540 4.4 2 2 Tu 1 . - CDS 793 - 981 68 ## - Term 1279 - 1324 4.3 3 3 Tu 1 . - CDS 1400 - 1810 232 ## Spro_0530 entry exclusion protein 2 - Prom 1902 - 1961 10.3 Predicted protein(s) >gi|316917052|gb|ADCU01000034.1| GENE 1 21 - 344 135 107 aa, chain - ## HITS:1 COG:no KEGG:ECO111_p5-03 NR:ns ## KEGG: ECO111_p5-03 # Name: not_defined # Def: putative mobilization protein 2 # Organism: E.coli_O111_H- # Pathway: not_defined # 4 107 5 107 115 125 66.0 4e-28 MSDKRTKMLTLWVTPEEHERLLARCDSPRLATWMREVCLEEKPTRTSKPLPTLAPELLRQ LAGMGNNLNQIARRLNSGEWSAHDRVQVVAALMALERELQLLREQAR >gi|316917052|gb|ADCU01000034.1| GENE 2 793 - 981 68 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSYSTAPVDNGHSTAPLKKSVAVQQQPRPKHVTAGKGVSPEREQGAGKYAFSADSPEQGR VP >gi|316917052|gb|ADCU01000034.1| GENE 3 1400 - 1810 232 136 aa, chain - ## HITS:1 COG:no KEGG:Spro_0530 NR:ns ## KEGG: Spro_0530 # Name: not_defined # Def: entry exclusion protein 2 # Organism: S.proteamaculans # Pathway: not_defined # 8 135 8 136 137 100 41.0 2e-20 MKALNTVIAVAVFSFSLVGCSQHLSSAERHAKHFVYAEKSDFDPSYQTRMQESARLSVPF FDQFYQQGKKDKLAGVSREQAQQQSDYFSSPAFLDAIQRESEFAGKKYSQSQNQKWRLLM SQEAAGAYLDGYEGRK Prediction of potential genes in microbial genomes Time: Wed May 18 15:52:51 2011 Seq name: gi|316917048|gb|ADCU01000035.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.35, whole genome shotgun sequence Length of sequence - 1290 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 447 - 1289 326 ## EpC_pEp050040 mobilization protein A Predicted protein(s) >gi|316917048|gb|ADCU01000035.1| GENE 1 447 - 1289 326 280 aa, chain - ## HITS:1 COG:no KEGG:EpC_pEp050040 NR:ns ## KEGG: EpC_pEp050040 # Name: mobA # Def: mobilization protein A # Organism: E.pyrifoliae # Pathway: not_defined # 1 280 205 490 504 108 35.0 2e-22 VRQAKNSISLASPDGGQNLRLKGAIYGQDFRFSEGLRAEIDKAGEHYRSESRARVQSARE RYQYGVALKRAENQQRYPRAELNDALDGVEKLVIDRGWSVGDVVSGRERAVVARDTDTGE RAVDDRTVGYVEKVEHEDVGHSVSRGYERSLFGVTEGRESEPELDVRGRDTAGCQIGEEV NTDDSIRAGIIERLRGVTAELRDAATSVVGKLQRVAADVHDYFRTGGNLERAEHPLVSES EQVARAGKRLEWSGAELKQASVEYQRQIRRDSPRFKGLEL Prediction of potential genes in microbial genomes Time: Wed May 18 15:52:56 2011 Seq name: gi|316917044|gb|ADCU01000036.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.36, whole genome shotgun sequence Length of sequence - 1665 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 136 - 402 147 ## COG1662 Transposase and inactivated derivatives, IS1 family - Term 227 - 266 -0.7 2 2 Op 1 . - CDS 413 - 574 179 ## COG0251 Putative translation initiation inhibitor, yjgF family 3 2 Op 2 . - CDS 599 - 1399 579 ## COG0384 Predicted epimerase, PhzC/PhzF homolog - Prom 1599 - 1658 1.6 Predicted protein(s) >gi|316917044|gb|ADCU01000036.1| GENE 1 136 - 402 147 88 aa, chain + ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 88 80 167 167 171 100.0 3e-43 MATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARL GRKSLSFSKSVELHDKVIGHYLNIKHYQ >gi|316917044|gb|ADCU01000036.1| GENE 2 413 - 574 179 53 aa, chain - ## HITS:1 COG:PA3123 KEGG:ns NR:ns ## COG: PA3123 COG0251 # Protein_GI_number: 15598319 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pseudomonas aeruginosa # 1 52 1 52 125 67 57.0 7e-12 MSSNLQRFASDLPFPFAKAVRAGDFLFLSGQVSMSPDGKPLYGSVTDQSENIR >gi|316917044|gb|ADCU01000036.1| GENE 3 599 - 1399 579 266 aa, chain - ## HITS:1 COG:PA2770 KEGG:ns NR:ns ## COG: PA2770 COG0384 # Protein_GI_number: 15597966 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Pseudomonas aeruginosa # 1 264 1 257 259 305 59.0 6e-83 MQIEIFQVDAFTSQIFGGNPAAVCPLEQWVEDEVLQKIAAENNLSETAFFVQKSDIIELR WFTPLVEVDLCGHATLATAWVLFNQRGATQDTLRFATRSGVLSVSRDGEFLAMDFPAKKP ELIDVPEGLAQALSLNTPIRQVYKADDYIVLVDSPEIVEALRPDFSLLAQYQVRGVVVTA AGHDCDFVSRWFGPNVGVNEDPVTGSAHTCLAPIWAEKLRRDDLSAQQGGCRKGQLGCRL YTNAEGEDRVIIRGQAVLYLHGIISV Prediction of potential genes in microbial genomes Time: Wed May 18 15:52:57 2011 Seq name: gi|316917041|gb|ADCU01000037.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.37, whole genome shotgun sequence Length of sequence - 1134 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 239 - 298 5.4 1 1 Tu 1 . + CDS 347 - 661 322 ## SeHA_A0017 colicin Ib protein + Term 672 - 706 4.5 - Term 488 - 521 1.6 2 2 Tu 1 . - CDS 678 - 986 89 ## gi|49176959|ref|YP_025354.1| alveicin A immunity protein - Prom 1021 - 1080 4.7 Predicted protein(s) >gi|316917041|gb|ADCU01000037.1| GENE 1 347 - 661 322 104 aa, chain + ## HITS:1 COG:no KEGG:SeHA_A0017 NR:ns ## KEGG: SeHA_A0017 # Name: not_defined # Def: colicin Ib protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 7 104 529 626 626 112 55.0 4e-24 MDVEKAAKNISKFSKGLGWVGPAIDITDWFTELYKAVKTDNWRSLYVKTETIAVGLAATH VTALAFSAVLGGPIGILGYGLIMAGVGALVNETIVDEANKVIGI >gi|316917041|gb|ADCU01000037.1| GENE 2 678 - 986 89 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|49176959|ref|YP_025354.1| ## NR: gi|49176959|ref|YP_025354.1| alveicin A immunity protein [Hafnia alvei] # 1 102 10 111 111 177 100.0 2e-43 MFWGYFMAACILYASYGDDEPKIIALRIFGLASAILFPFSRFLIEKAALRYTKKEFWKTG FFKDGVPKTYLMTLYFIFIFMTSIPIGVLSVCFEIKNVTAKI Prediction of potential genes in microbial genomes Time: Wed May 18 15:53:05 2011 Seq name: gi|316917037|gb|ADCU01000038.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.38, whole genome shotgun sequence Length of sequence - 1073 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 239 196 ## gi|288995481|emb|CAZ68175.1| MobD protein + Prom 304 - 363 3.6 2 2 Op 1 1/0.000 + CDS 384 - 716 248 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system 3 2 Op 2 . + CDS 718 - 1002 368 ## COG2944 Predicted transcriptional regulator Predicted protein(s) >gi|316917037|gb|ADCU01000038.1| GENE 1 3 - 239 196 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288995481|emb|CAZ68175.1| ## NR: gi|288995481|emb|CAZ68175.1| MobD protein [Rahnella sp. WMR66] # 1 78 1 78 78 68 79.0 1e-10 MTEMEKQLLSALESLQTSYEQQQQAWQDSYSSLQRMFETTSQALERNDRVCLNLSNQVNG LYEQVERLSNDLSRLTRS >gi|316917037|gb|ADCU01000038.1| GENE 2 384 - 716 248 110 aa, chain + ## HITS:1 COG:VCA0468 KEGG:ns NR:ns ## COG: VCA0468 COG2026 # Protein_GI_number: 15601229 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Vibrio cholerae # 7 109 5 108 110 67 35.0 8e-12 MSHTIEFIETPMFTRQIMQIATDDELKELQKELIESPDKGDLIQKTGGLRKIRMATGNQG KSGSARVIYFLATAEVIYLVMAYPKSTKDSLTDAEKAELKKLTQRLKDEV >gi|316917037|gb|ADCU01000038.1| GENE 3 718 - 1002 368 94 aa, chain + ## HITS:1 COG:STM4033 KEGG:ns NR:ns ## COG: STM4033 COG2944 # Protein_GI_number: 16767298 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 16 86 6 76 84 58 38.0 4e-09 MSFFDELKASLEEAVEIKNGTKSPARVTRYEMADIKAIRENLNITQSEMAKVLGTSLDTI KSWETGRRNPTGLAAKVLATIQANPKFFHELAAH Prediction of potential genes in microbial genomes Time: Wed May 18 15:53:10 2011 Seq name: gi|316917035|gb|ADCU01000039.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.39, whole genome shotgun sequence Length of sequence - 1054 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 236 - 271 4.1 1 1 Tu 1 . - CDS 358 - 528 83 ## gi|281604048|gb|ADA77030.1| sulfatase - Prom 763 - 822 4.2 Predicted protein(s) >gi|316917035|gb|ADCU01000039.1| GENE 1 358 - 528 83 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|281604048|gb|ADA77030.1| ## NR: gi|281604048|gb|ADA77030.1| sulfatase [Shigella flexneri 2002017] # 1 56 451 506 506 80 71.0 3e-14 MFLGDSLFEENKNKNKNNCTSAIGDKYIKTCNEKVEIEANKETIESIKQLQYFGER Prediction of potential genes in microbial genomes Time: Wed May 18 15:53:15 2011 Seq name: gi|316917033|gb|ADCU01000040.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.40, whole genome shotgun sequence Length of sequence - 1049 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed May 18 15:53:15 2011 Seq name: gi|316917031|gb|ADCU01000041.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.41, whole genome shotgun sequence Length of sequence - 1028 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 129 - 188 3.5 1 1 Tu 1 . + CDS 366 - 1026 428 ## PMI1908 colicin Predicted protein(s) >gi|316917031|gb|ADCU01000041.1| GENE 1 366 - 1026 428 220 aa, chain + ## HITS:1 COG:no KEGG:PMI1908 NR:ns ## KEGG: PMI1908 # Name: not_defined # Def: colicin # Organism: P.mirabilis # Pathway: not_defined # 26 220 373 562 564 186 49.0 7e-46 MREASDEVINSNLNQGHGVGEAARAERDYREKVKNAINDNSPNVLQDAIKFTADFYKEVF NAYGEKAEKLAKLLADQAKGKKIRNVEDALKSYEKHKANINKKINAKDREAIAKALESMD VEKAAKNISKFSKGLGWVGPAIDITDWFTELYKAVKTDNWRSLYVKTETIAVGLAATHVT ALAFSAVLGGPIGILGYGLIMAGVGALVNETIVDEANKVI Prediction of potential genes in microbial genomes Time: Wed May 18 15:53:19 2011 Seq name: gi|316917029|gb|ADCU01000042.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.42, whole genome shotgun sequence Length of sequence - 963 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 131 - 190 10.0 1 1 Tu 1 . + CDS 213 - 963 198 ## EAMY_1045 hypothetical protein Predicted protein(s) >gi|316917029|gb|ADCU01000042.1| GENE 1 213 - 963 198 250 aa, chain + ## HITS:1 COG:no KEGG:EAMY_1045 NR:ns ## KEGG: EAMY_1045 # Name: not_defined # Def: hypothetical protein # Organism: E.amylovora # Pathway: not_defined # 78 126 45 93 145 64 65.0 4e-09 MSGGDGKGHNSGAHDSGGSINGTSGKGGPSSGGASDNSGWSSENNPWGGGNSGMIGGSQG GNGANHGGENTSSNYGKDVSRQIGDAIARKEGINPKIFTGYFIRSDGYLIGITPLVSGDA FGVNLGLFNNNQNSSSENKGWNGRNGDGIKNSSQGGWKIKTNELTSNQVAAAKSVPEPKN SKYYKSMREASDEVINSNLNQGHGVGEAARAERDYREKVKNAINDNSPNVLQDAIKFTAD FYKEVFNAYG Prediction of potential genes in microbial genomes Time: Wed May 18 15:53:26 2011 Seq name: gi|316917027|gb|ADCU01000043.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.43, whole genome shotgun sequence Length of sequence - 949 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 309 - 467 94 ## - Prom 549 - 608 10.7 Predicted protein(s) >gi|316917027|gb|ADCU01000043.1| GENE 1 309 - 467 94 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRHIKNTQQRKLFKKTQASKNKLSPTINNHNYNMVVIIGRAADLVFWHILTY Prediction of potential genes in microbial genomes Time: Wed May 18 15:53:30 2011 Seq name: gi|316917024|gb|ADCU01000044.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.44, whole genome shotgun sequence Length of sequence - 923 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 434 236 ## ASA_pAsa205 mobilization relaxase 2 1 Op 2 . - CDS 431 - 754 135 ## ECO111_p5-03 putative mobilization protein 2 - Prom 862 - 921 1.6 Predicted protein(s) >gi|316917024|gb|ADCU01000044.1| GENE 1 2 - 434 236 144 aa, chain - ## HITS:1 COG:no KEGG:ASA_pAsa205 NR:ns ## KEGG: ASA_pAsa205 # Name: mobA # Def: mobilization relaxase # Organism: A.salmonicida # Pathway: not_defined # 1 144 1 144 486 218 79.0 5e-56 MIVKFHARGTGKGSGPVDYLLGKDRARVDAKLLRGASEEVIALIDSSPYAKKYTSGVLSF AEADLASETKQKVMDSFERALLPGLDADQYSVLWVEHRDKGRLELNFVIPNIELQRGKRL QPYFDRADRPRIDAWQTVVNAQLG >gi|316917024|gb|ADCU01000044.1| GENE 2 431 - 754 135 107 aa, chain - ## HITS:1 COG:no KEGG:ECO111_p5-03 NR:ns ## KEGG: ECO111_p5-03 # Name: not_defined # Def: putative mobilization protein 2 # Organism: E.coli_O111_H- # Pathway: not_defined # 4 107 5 107 115 125 66.0 4e-28 MSDKRTKMLTLWVTPEEHERLLARCDSPRLATWMREVCLEEKPTRTSKPLPTLAPELLRQ LAGMGNNLNQIARRLNSGEWSAHDRVQVVAALMALERELQLLREQAR Prediction of potential genes in microbial genomes Time: Wed May 18 15:53:36 2011 Seq name: gi|316917021|gb|ADCU01000045.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.45, whole genome shotgun sequence Length of sequence - 921 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 176 - 209 0.8 1 1 Tu 1 . - CDS 274 - 453 127 ## gi|49176959|ref|YP_025354.1| alveicin A immunity protein - Prom 488 - 547 4.7 2 2 Tu 1 . - CDS 631 - 888 175 ## gi|49176964|ref|YP_025356.1| putative mobilization protein MobD Predicted protein(s) >gi|316917021|gb|ADCU01000045.1| GENE 1 274 - 453 127 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|49176959|ref|YP_025354.1| ## NR: gi|49176959|ref|YP_025354.1| alveicin A immunity protein [Hafnia alvei] # 1 54 10 63 111 98 96.0 1e-19 MFWGYFMAACILYASYGDDEPKIIALRIFGLASAILFPFSRFLIEKAALRYNEKRILEN >gi|316917021|gb|ADCU01000045.1| GENE 2 631 - 888 175 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|49176964|ref|YP_025356.1| ## NR: gi|49176964|ref|YP_025356.1| putative mobilization protein MobD [Hafnia alvei] # 1 85 1 85 85 88 100.0 2e-16 MTALEQELLSAFEALQQSYVMQQQAWSESYSALQQMFTTTSAQAETLNAQNIRLSQSLSR LLEQVSDLSGQVQSLSRQVSSIKGR Prediction of potential genes in microbial genomes Time: Wed May 18 15:53:45 2011 Seq name: gi|316917018|gb|ADCU01000046.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.46, whole genome shotgun sequence Length of sequence - 884 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 528 323 ## PMI1908 colicin + Term 539 - 573 4.5 - Term 355 - 388 1.6 2 2 Tu 1 . - CDS 545 - 853 89 ## gi|49176959|ref|YP_025354.1| alveicin A immunity protein Predicted protein(s) >gi|316917018|gb|ADCU01000046.1| GENE 1 1 - 528 323 175 aa, chain + ## HITS:1 COG:no KEGG:PMI1908 NR:ns ## KEGG: PMI1908 # Name: not_defined # Def: colicin # Organism: P.mirabilis # Pathway: not_defined # 2 175 391 564 564 187 54.0 1e-46 QIKFTADFYKEVFNAYGEKAEKLAKLLADQAKGKKIRNVEDALKSYEKHKANINKKINAK DREAIAKALESMDVEKAAKNISKFSKGLGWVGPAIDITDWFTELYKAVKTDNWRSLYVKT ETIAVGLAATHVTALAFSAVLGGPIGILGYGLIMAGVGALVNETIVDEANKVIGI >gi|316917018|gb|ADCU01000046.1| GENE 2 545 - 853 89 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|49176959|ref|YP_025354.1| ## NR: gi|49176959|ref|YP_025354.1| alveicin A immunity protein [Hafnia alvei] # 1 102 10 111 111 177 100.0 2e-43 MFWGYFMAACILYASYGDDEPKIIALRIFGLASAILFPFSRFLIEKAALRYTKKEFWKTG FFKDGVPKTYLMTLYFIFIFMTSIPIGVLSVCFEIKNVTAKI Prediction of potential genes in microbial genomes Time: Wed May 18 15:53:54 2011 Seq name: gi|316917016|gb|ADCU01000047.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.47, whole genome shotgun sequence Length of sequence - 861 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 51 - 861 340 ## ASA_pAsa205 mobilization relaxase Predicted protein(s) >gi|316917016|gb|ADCU01000047.1| GENE 1 51 - 861 340 270 aa, chain + ## HITS:1 COG:no KEGG:ASA_pAsa205 NR:ns ## KEGG: ASA_pAsa205 # Name: mobA # Def: mobilization relaxase # Organism: A.salmonicida # Pathway: not_defined # 1 270 1 270 486 332 69.0 1e-89 MIVKFHARGTGKGSGPVDYLLGKDRARVDAKLLRGASEEVIALIDSSPYAKKYTSGVLSF AEADLASETKQKVMDSFERALLPGLDADQYSVLWVEHRDKGRLELNFVIPNIELQRGKRL QPYFDRADRPRIDAWQTVVNAQLGLHDPNDPLNQRALVTANSLPREKQAAAEAITHGLLR RIDAGEIKNRADVVEALRDAGFSVVRQAKNSISLASPDGGQNLRLKGAIYGQDFRFSEGL RAEIDKAGEHYRSESRARVQSARERYQYGV Prediction of potential genes in microbial genomes Time: Wed May 18 15:53:58 2011 Seq name: gi|316917015|gb|ADCU01000048.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.48, whole genome shotgun sequence Length of sequence - 834 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 647 - 774 100.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. Prediction of potential genes in microbial genomes Time: Wed May 18 15:53:59 2011 Seq name: gi|316917011|gb|ADCU01000049.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.49, whole genome shotgun sequence Length of sequence - 821 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 7/0.000 + CDS 3 - 176 87 ## COG3677 Transposase and inactivated derivatives 2 1 Op 2 . + CDS 230 - 598 139 ## COG1662 Transposase and inactivated derivatives, IS1 family 3 2 Tu 1 . - CDS 589 - 819 109 ## Dd703_0501 hypothetical protein Predicted protein(s) >gi|316917011|gb|ADCU01000049.1| GENE 1 3 - 176 87 57 aa, chain + ## HITS:1 COG:YPO0964 KEGG:ns NR:ns ## COG: YPO0964 COG3677 # Protein_GI_number: 16121267 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 53 35 87 91 96 88.0 9e-21 CKRTFQLDYAYRACQPGMKEQIVDLAMNNAGIRDTARALHISINAVVRTLKNSHPGM >gi|316917011|gb|ADCU01000049.1| GENE 2 230 - 598 139 122 aa, chain + ## HITS:1 COG:YPO0963 KEGG:ns NR:ns ## COG: YPO0963 COG1662 # Protein_GI_number: 16121266 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Yersinia pestis # 5 122 1 117 118 169 78.0 2e-42 MWSFVGNKKRQRWLWYAWEPRLKRIIAHVFGSRSKKTLCKLLKLLSGFSVAFWCTDGYRA YNEKLPKAKHIVGKLYTQRIERENLTLRNRLKRLNRKTLGYSKLAEMHDRIIGTFIEREH YV >gi|316917011|gb|ADCU01000049.1| GENE 3 589 - 819 109 76 aa, chain - ## HITS:1 COG:no KEGG:Dd703_0501 NR:ns ## KEGG: Dd703_0501 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii # Pathway: not_defined # 1 55 99 153 180 103 87.0 2e-21 VAQALAQLAGVPCFDDLLLKAPGGVSLKNLNTKQEKVDAIGGSFSINPVISNEGKCIRRQ LLLPGHVFNVLMLHQT Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:01 2011 Seq name: gi|316917009|gb|ADCU01000050.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.50, whole genome shotgun sequence Length of sequence - 818 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 817 259 ## CKO_pCKO2p07158 hypothetical protein Predicted protein(s) >gi|316917009|gb|ADCU01000050.1| GENE 1 1 - 817 259 272 aa, chain + ## HITS:1 COG:no KEGG:CKO_pCKO2p07158 NR:ns ## KEGG: CKO_pCKO2p07158 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 270 104 386 511 211 50.0 2e-53 ELNFVIPNIELQRGKRLQPYFDRADRPRIDAWQTVVNAQLGLHDPNDPLNQRALVTANSL PREKQAAAEAITHGLLRRIDAGEIKNRADVVEALRDAGFSVVRQAKNSISLASPDGGQNL RLKGAIYGQDFRFSEGLRAEIDKAGEHYRSESRARVQSARERYQYGVALKRAENQQRYPR AELNDALDGVEKLVIDRGWSVGDVVSGRERAVVARDTDTGERAVDDRTVGYVEKVEHEDV GHSVSRGYERSLFGVTEGRESEPELDVRGRDT Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:06 2011 Seq name: gi|316917006|gb|ADCU01000051.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.51, whole genome shotgun sequence Length of sequence - 793 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 187 186 ## SeHA_A0017 colicin Ib protein + Term 198 - 232 4.5 - Term 14 - 47 1.6 2 2 Tu 1 . - CDS 204 - 512 89 ## gi|49176959|ref|YP_025354.1| alveicin A immunity protein - Prom 547 - 606 4.7 Predicted protein(s) >gi|316917006|gb|ADCU01000051.1| GENE 1 2 - 187 186 61 aa, chain + ## HITS:1 COG:no KEGG:SeHA_A0017 NR:ns ## KEGG: SeHA_A0017 # Name: not_defined # Def: colicin Ib protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 2 61 567 626 626 73 55.0 2e-12 SLYVKTETIAVGLAATHVTALAFSAVLGGPIGILGYGLIMAGVGALVNETIVDEANKVIG I >gi|316917006|gb|ADCU01000051.1| GENE 2 204 - 512 89 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|49176959|ref|YP_025354.1| ## NR: gi|49176959|ref|YP_025354.1| alveicin A immunity protein [Hafnia alvei] # 1 102 10 111 111 177 100.0 2e-43 MFWGYFMAACILYASYGDDEPKIIALRIFGLASAILFPFSRFLIEKAALRYTKKEFWKTG FFKDGVPKTYLMTLYFIFIFMTSIPIGVLSVCFEIKNVTAKI Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:14 2011 Seq name: gi|316917003|gb|ADCU01000052.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.52, whole genome shotgun sequence Length of sequence - 785 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 284 143 ## gi|49176961|ref|YP_025353.1| alveicin A bacteriocin toxin - Prom 307 - 366 10.0 + Prom 316 - 375 10.9 2 2 Tu 1 . + CDS 466 - 784 122 ## Spro_0530 entry exclusion protein 2 Predicted protein(s) >gi|316917003|gb|ADCU01000052.1| GENE 1 2 - 284 143 94 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|49176961|ref|YP_025353.1| ## NR: gi|49176961|ref|YP_025353.1| alveicin A bacteriocin toxin [Hafnia alvei] # 1 92 1 92 408 103 98.0 4e-21 MSGGDGKGHNSGAHDSGGSINGTSGKGGPSSGGASDNSGWSSENNPWGGGNSGMIGGSQG GNGANHGGENTSSNYGKDVSRQIGDAIARKEASI >gi|316917003|gb|ADCU01000052.1| GENE 2 466 - 784 122 106 aa, chain + ## HITS:1 COG:no KEGG:Spro_0530 NR:ns ## KEGG: Spro_0530 # Name: not_defined # Def: entry exclusion protein 2 # Organism: S.proteamaculans # Pathway: not_defined # 8 103 8 104 137 80 42.0 2e-14 MKALNTVIAVAVFSFSLVGCSQHLSSAERHAKHFVYAEKSDFDPSYQTRMQESARLSVPF FDQFYQQGKKDKLAGVSREQAQQQSDYFSSPAFLDAIQRESEFAGK Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:25 2011 Seq name: gi|316917000|gb|ADCU01000053.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.53, whole genome shotgun sequence Length of sequence - 768 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 16 - 282 147 ## COG1662 Transposase and inactivated derivatives, IS1 family - Prom 428 - 487 2.0 2 2 Tu 1 . + CDS 465 - 680 68 ## SbBS512_E3230 putative IS1 encoded protein Predicted protein(s) >gi|316917000|gb|ADCU01000053.1| GENE 1 16 - 282 147 88 aa, chain - ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 88 80 167 167 171 100.0 3e-43 MATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARL GRKSLSFSKSVELHDKVIGHYLNIKHYQ >gi|316917000|gb|ADCU01000053.1| GENE 2 465 - 680 68 71 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E3230 NR:ns ## KEGG: SbBS512_E3230 # Name: not_defined # Def: putative IS1 encoded protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 35 71 1 37 37 65 97.0 8e-10 MAENRVEANAHNAGGCPASNAIHGHINDFLVRTGLRSGVSELQLPCFTAVRAEIALMSGS AFAVTHHPVSS Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:28 2011 Seq name: gi|316916999|gb|ADCU01000054.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.54, whole genome shotgun sequence Length of sequence - 701 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 77 - 152 57.0 # Glu TTC 0 0 - SSU_RRNA 292 - 698 99.0 # FJ222589 [D:1..1536] # 16S ribosomal RNA # Rahnella sp. N2-2 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Rahnella. Predicted protein(s) Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:29 2011 Seq name: gi|316916997|gb|ADCU01000055.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.55, whole genome shotgun sequence Length of sequence - 680 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 674 526 ## YPO3944 putative invasin Predicted protein(s) >gi|316916997|gb|ADCU01000055.1| GENE 1 2 - 674 526 224 aa, chain - ## HITS:1 COG:no KEGG:YPO3944 NR:ns ## KEGG: YPO3944 # Name: not_defined # Def: putative invasin # Organism: Y.pestis # Pathway: not_defined # 3 201 542 740 3013 114 50.0 2e-24 MWQMTGQQPLSVAILTVTADNAKANGTATNAVQAKVTDANGNVVPSVAVTFAANNGATIT TASANTDENGIATTTLTNITAGISKVTATINDSSQTVDTTFVADDGTATIIAGALTVTAD NAKANGTATNAVQAKVTDANGNVVPSVAVTFAANNGATITTASANTDENGLATTTLTNIT AGISKVTATINGNSQTVDTTFVADDGTATIIAGALTITIDGAKA Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:33 2011 Seq name: gi|316916996|gb|ADCU01000056.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.56, whole genome shotgun sequence Length of sequence - 633 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 198 - 257 3.0 1 1 Tu 1 . + CDS 378 - 633 92 ## ASA_pAsa206 mobilization protein Predicted protein(s) >gi|316916996|gb|ADCU01000056.1| GENE 1 378 - 633 92 85 aa, chain + ## HITS:1 COG:no KEGG:ASA_pAsa206 NR:ns ## KEGG: ASA_pAsa206 # Name: mobB # Def: mobilization protein # Organism: A.salmonicida # Pathway: not_defined # 1 78 1 78 154 68 46.0 5e-11 MDKIFDLAKDFEQKSTKQASTIEANPAHVFKAHENAINTALHSSGQRISSAIQEQSLTMR WMVLKSWLSIGVGLLVMLCLGGSVL Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:35 2011 Seq name: gi|316916994|gb|ADCU01000057.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.57, whole genome shotgun sequence Length of sequence - 616 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:36 2011 Seq name: gi|316916992|gb|ADCU01000058.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.58, whole genome shotgun sequence Length of sequence - 604 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 50 - 343 197 ## EpC_pEp050050 mobilization protein - Prom 511 - 570 3.3 Predicted protein(s) >gi|316916992|gb|ADCU01000058.1| GENE 1 50 - 343 197 97 aa, chain - ## HITS:1 COG:no KEGG:EpC_pEp050050 NR:ns ## KEGG: EpC_pEp050050 # Name: mobC # Def: mobilization protein # Organism: E.pyrifoliae # Pathway: not_defined # 1 90 6 94 107 72 45.0 3e-12 MTATEHQRLLERCDRIHLAEWLRQLGLGEHTARKRPVPEVAPELLRLVSGMGNNLNQIAR RLNQSDSLTPSERVSLLSILNSLDRQLGELLEQHRAR Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:38 2011 Seq name: gi|316916991|gb|ADCU01000059.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.59, whole genome shotgun sequence Length of sequence - 589 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:39 2011 Seq name: gi|316916989|gb|ADCU01000060.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.60, whole genome shotgun sequence Length of sequence - 547 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 1 - 546 96.0 # EF451155 [D:45016..47943] # 23S ribosomal RNA # Paenibacillus polymyxa # Bacteria; Firmicutes; Bacillales; Paenibacillaceae; Paenibacillus. Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:39 2011 Seq name: gi|316916987|gb|ADCU01000061.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.61, whole genome shotgun sequence Length of sequence - 529 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed May 18 15:54:40 2011 Seq name: gi|316916985|gb|ADCU01000062.1| Enterobacteriaceae bacterium 9_2_54FAA cont1.62, whole genome shotgun sequence Length of sequence - 528 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 528 371 ## ESA_00987 hypothetical protein Predicted protein(s) >gi|316916985|gb|ADCU01000062.1| GENE 1 3 - 528 371 175 aa, chain - ## HITS:1 COG:no KEGG:ESA_00987 NR:ns ## KEGG: ESA_00987 # Name: not_defined # Def: hypothetical protein # Organism: E.sakazakii # Pathway: not_defined # 2 174 591 761 1027 75 36.0 9e-13 ESTTTDAQGEAHVAVKNSAAGTVTITATAQGKSGSTVGTFEAIPVASVNVSMLINHQLAN NSAEDTAHVVVKDSAGNLMPNVAVAWSLSDSTTAAITQQSTTTDAQGEAHVAVKNSAAGT VTITATAQGKSGSTVGTFEAIPVASVNVSMLINHQLANNSAEDTAHVVVKDSAGN