Prediction of potential genes in microbial genomes Time: Tue Jul 5 12:05:56 2011 Seq name: gi|237663596|gb|GG668922.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD1, whole genome shotgun sequence Length of sequence - 742477 bp Number of predicted genes - 741, with homology - 713 Number of transcription units - 368, operones - 194 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 9 - 84 75.5 # Asp GTC 0 0 + TRNA 130 - 202 75.3 # Phe GAA 0 0 + TRNA 208 - 288 72.8 # Tyr GTA 0 0 + TRNA 293 - 366 68.8 # Trp CCA 0 0 + TRNA 403 - 475 65.0 # His GTG 0 0 + TRNA 490 - 561 67.6 # Gln TTG 0 0 + TRNA 587 - 657 71.3 # Cys GCA 0 0 + TRNA 671 - 754 62.3 # Leu CAA 0 0 - Term 656 - 726 31.6 1 1 Op 1 . - CDS 772 - 1032 288 ## gi|227518309|ref|ZP_03948358.1| hypothetical protein HMPREF0348_1292 - Prom 1261 - 1320 4.5 2 1 Op 2 6/0.023 - CDS 1327 - 2136 319 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 3 1 Op 3 . - CDS 2195 - 3952 1156 ## COG4986 ABC-type anion transport system, duplicated permease component - Prom 4062 - 4121 5.1 + Prom 4212 - 4271 5.1 4 2 Tu 1 . + CDS 4497 - 5009 410 ## EF1055 tunicamycin resistance protein, putative + Term 5018 - 5066 10.2 + Prom 5139 - 5198 7.9 5 3 Op 1 . + CDS 5278 - 6876 1404 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family 6 3 Op 2 . + CDS 6876 - 7301 611 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 7316 - 7374 13.7 - Term 7311 - 7351 2.1 7 4 Tu 1 . - CDS 7356 - 9026 1441 ## COG2508 Regulator of polyketide synthase expression - Prom 9058 - 9117 6.9 8 5 Op 1 . + CDS 9407 - 11068 1742 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 9 5 Op 2 1/0.287 + CDS 11096 - 12319 1088 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 10 5 Op 3 . + CDS 12316 - 13533 1256 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases + Prom 13687 - 13746 4.0 11 6 Op 1 . + CDS 13768 - 14247 463 ## PROTEIN SUPPORTED gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 12 6 Op 2 . + CDS 14323 - 14745 445 ## COG2764 Uncharacterized protein conserved in bacteria + Term 14988 - 15032 6.1 - Term 14976 - 15019 1.6 13 7 Tu 1 . - CDS 15024 - 15662 626 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 15683 - 15742 6.5 - Term 15719 - 15779 11.7 14 8 Op 1 . - CDS 15783 - 15929 236 ## EF1067 hypothetical protein - Prom 15951 - 16010 4.2 15 8 Op 2 . - CDS 16060 - 17097 471 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase - Prom 17270 - 17329 6.1 + Prom 17235 - 17294 5.2 16 9 Tu 1 . + CDS 17317 - 18480 1305 ## COG0153 Galactokinase + Prom 19398 - 19457 60.3 17 10 Op 1 1/0.287 + CDS 19499 - 20992 1406 ## COG4468 Galactose-1-phosphate uridyltransferase 18 10 Op 2 . + CDS 20999 - 22003 891 ## COG1609 Transcriptional regulators + Term 22004 - 22052 8.2 19 11 Tu 1 . + CDS 22085 - 22249 217 ## EF1073 hypothetical protein + Prom 22279 - 22338 1.5 20 12 Op 1 . + CDS 22435 - 22716 131 ## EF1073 hypothetical protein 21 12 Op 2 . + CDS 22780 - 23052 358 ## EF1074 hypothetical protein + Term 23054 - 23088 1.6 22 13 Op 1 . + CDS 23115 - 23621 632 ## EF1075 acetyltransferase 23 13 Op 2 6/0.023 + CDS 23670 - 24110 485 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 24116 - 24175 9.2 24 14 Tu 1 . + CDS 24303 - 25457 1251 ## COG0477 Permeases of the major facilitator superfamily + Term 25478 - 25531 12.2 + Prom 25491 - 25550 8.5 25 15 Op 1 . + CDS 25570 - 25671 129 ## 26 15 Op 2 . + CDS 25704 - 25988 108 ## + Term 26087 - 26130 6.1 + Prom 26148 - 26207 7.9 27 16 Op 1 . + CDS 26228 - 27544 1322 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 28 16 Op 2 . + CDS 27549 - 27938 507 ## EF1081 hypothetical protein + Prom 27946 - 28005 2.3 29 17 Op 1 . + CDS 28025 - 28207 282 ## EF1082 hypothetical protein 30 17 Op 2 . + CDS 28225 - 28530 380 ## EF1083 hypothetical protein 31 17 Op 3 . + CDS 28583 - 29014 453 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins 32 17 Op 4 . + CDS 29085 - 29327 262 ## EF1085 hypothetical protein + Prom 29458 - 29517 6.1 33 18 Tu 1 . + CDS 29697 - 30143 453 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 30152 - 30200 8.2 34 19 Tu 1 . - CDS 30082 - 30348 123 ## + Prom 30188 - 30247 7.0 35 20 Op 1 . + CDS 30283 - 30996 695 ## COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 36 20 Op 2 . + CDS 31067 - 31462 319 ## EF1089 hypothetical protein + Term 31498 - 31551 17.1 - Term 31484 - 31538 17.3 37 21 Tu 1 . - CDS 31648 - 33069 1230 ## EF1090 hypothetical protein - Prom 33197 - 33256 5.3 + Prom 33184 - 33243 9.8 38 22 Op 1 . + CDS 33397 - 36708 3139 ## COG4932 Predicted outer membrane protein 39 22 Op 2 . + CDS 36712 - 38142 1431 ## EF1092 cell wall surface anchor family protein 40 22 Op 3 . + CDS 38139 - 40022 2196 ## EF1093 cell wall surface anchor family protein + Term 40158 - 40186 -0.9 + Prom 40100 - 40159 3.9 41 23 Tu 1 . + CDS 40257 - 41111 798 ## COG3764 Sortase (surface protein transpeptidase) - Term 40982 - 41020 1.5 42 24 Tu 1 . - CDS 41225 - 41470 112 ## EF1095 hypothetical protein - Prom 41523 - 41582 8.5 + Prom 41487 - 41546 5.9 43 25 Tu 1 . + CDS 41665 - 41868 395 ## COG2155 Uncharacterized conserved protein + Term 41919 - 41958 5.2 44 26 Tu 1 . + CDS 42227 - 42739 519 ## EF1097 hypothetical protein + Term 42976 - 43038 16.6 45 27 Tu 1 . - CDS 42859 - 43077 127 ## gi|257415712|ref|ZP_05592706.1| predicted protein - Term 43497 - 43545 10.1 46 28 Tu 1 . - CDS 43550 - 43855 381 ## EF1098 hypothetical protein - Prom 43876 - 43935 11.9 47 29 Tu 1 . + CDS 44190 - 45299 1022 ## EF1099 collagen adhesin protein + Prom 45301 - 45360 80.3 48 30 Op 1 . + CDS 45557 - 46018 210 ## EF1099 collagen adhesin protein + Term 46022 - 46071 7.8 + Prom 46053 - 46112 1.6 49 30 Op 2 . + CDS 46143 - 47738 1459 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 50 31 Tu 1 . + CDS 47808 - 48542 581 ## COG0500 SAM-dependent methyltransferases + Term 48603 - 48644 -0.8 - Term 48489 - 48531 -0.1 51 32 Tu 1 . - CDS 48539 - 48940 535 ## EF1102 hypothetical protein - Prom 48963 - 49022 6.3 - Term 48997 - 49035 3.0 52 33 Tu 1 . - CDS 49050 - 50402 1381 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 50509 - 50568 12.0 - Term 50514 - 50572 14.3 53 34 Tu 1 . - CDS 50573 - 50758 236 ## EF1104 hypothetical protein - Prom 50793 - 50852 9.5 - Term 50886 - 50940 18.0 54 35 Tu 1 . - CDS 50985 - 51245 198 ## EF1105 hypothetical protein - Prom 51442 - 51501 10.1 + Prom 51378 - 51437 9.9 55 36 Op 1 17/0.000 + CDS 51597 - 52358 899 ## COG0247 Fe-S oxidoreductase 56 36 Op 2 13/0.000 + CDS 52371 - 53843 1364 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain 57 36 Op 3 . + CDS 53836 - 54555 870 ## COG1556 Uncharacterized conserved protein + Term 54563 - 54617 10.7 + Prom 54628 - 54687 6.7 58 37 Tu 1 . + CDS 54776 - 55324 613 ## COG0681 Signal peptidase I + Term 55345 - 55400 13.5 + Prom 55350 - 55409 5.2 59 38 Tu 1 . + CDS 55435 - 55647 301 ## EF1112 exonuclease RexB + Prom 55926 - 55985 80.4 60 39 Op 1 8/0.000 + CDS 56015 - 59374 3202 ## COG3857 ATP-dependent nuclease, subunit B 61 39 Op 2 . + CDS 59367 - 61493 2091 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 62 39 Op 3 . + CDS 61535 - 63160 1421 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 63 39 Op 4 1/0.287 + CDS 63230 - 63574 466 ## COG1733 Predicted transcriptional regulators + Term 63819 - 63866 12.2 + Prom 63815 - 63874 8.9 64 40 Op 1 40/0.000 + CDS 63894 - 64940 1413 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 65 40 Op 2 . + CDS 64948 - 67371 2848 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit + Term 67387 - 67432 14.1 - Term 67459 - 67512 7.5 66 41 Op 1 17/0.000 - CDS 67567 - 68232 735 ## COG0765 ABC-type amino acid transport system, permease component 67 41 Op 2 31/0.000 - CDS 68244 - 68957 549 ## COG0765 ABC-type amino acid transport system, permease component 68 41 Op 3 16/0.000 - CDS 69003 - 69830 1134 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 69 41 Op 4 . - CDS 69865 - 70596 636 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 70705 - 70764 8.9 + Prom 70779 - 70838 4.2 70 42 Op 1 2/0.126 + CDS 70861 - 71688 757 ## COG0796 Glutamate racemase 71 42 Op 2 . + CDS 71681 - 73036 470 ## PROTEIN SUPPORTED gi|165937309|ref|ZP_02225873.1| non-canonical purine NTP pyrophosphatase RdgB 72 42 Op 3 . + CDS 73049 - 73561 564 ## COG0622 Predicted phosphoesterase + Term 73607 - 73662 18.1 - Term 73593 - 73649 18.3 73 43 Tu 1 . - CDS 73655 - 74419 572 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 74463 - 74522 6.3 + Prom 74514 - 74573 4.6 74 44 Op 1 . + CDS 74613 - 75680 1096 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 75 44 Op 2 2/0.126 + CDS 75698 - 76156 431 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 76 44 Op 3 . + CDS 76169 - 77656 1501 ## COG3037 Uncharacterized protein conserved in bacteria 77 44 Op 4 . + CDS 77671 - 77970 416 ## EF1128 phosphotransferase enzyme II, B compnent SgaB 78 44 Op 5 9/0.000 + CDS 77984 - 78622 897 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 79 44 Op 6 8/0.000 + CDS 78627 - 79487 626 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 80 44 Op 7 . + CDS 79477 - 80187 669 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Term 80245 - 80296 13.1 + Prom 80236 - 80295 10.0 81 45 Op 1 . + CDS 80445 - 80933 688 ## COG0517 FOG: CBS domain + Prom 80935 - 80994 3.2 82 45 Op 2 6/0.023 + CDS 81014 - 81715 928 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase 83 45 Op 3 . + CDS 81752 - 82921 1251 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 82928 - 82974 10.3 - Term 82916 - 82962 10.3 84 46 Tu 1 . - CDS 82967 - 83887 925 ## COG0668 Small-conductance mechanosensitive channel - Prom 84016 - 84075 5.1 + Prom 83956 - 84015 14.5 85 47 Op 1 . + CDS 84057 - 84419 172 ## EF1137 hypothetical protein 86 47 Op 2 . + CDS 84496 - 85320 1063 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 85340 - 85378 5.0 - Term 85321 - 85370 8.7 87 48 Tu 1 . - CDS 85371 - 86093 783 ## COG2071 Predicted glutamine amidotransferases - Prom 86122 - 86181 5.4 - Term 86156 - 86187 3.1 88 49 Tu 1 . - CDS 86236 - 86616 460 ## PROTEIN SUPPORTED gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 - Prom 86647 - 86706 3.0 + Prom 86592 - 86651 5.7 89 50 Tu 1 . + CDS 86759 - 87205 371 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 87215 - 87263 11.0 - Term 87196 - 87255 16.3 90 51 Op 1 3/0.080 - CDS 87269 - 88081 1014 ## COG0561 Predicted hydrolases of the HAD superfamily 91 51 Op 2 1/0.287 - CDS 88100 - 89470 1353 ## COG1078 HD superfamily phosphohydrolases 92 51 Op 3 . - CDS 89467 - 90318 800 ## COG0095 Lipoate-protein ligase A - Prom 90376 - 90435 5.5 + Prom 90315 - 90374 8.1 93 52 Op 1 . + CDS 90614 - 91051 668 ## COG4506 Uncharacterized protein conserved in bacteria + Term 91053 - 91098 1.1 94 52 Op 2 5/0.023 + CDS 91128 - 91745 904 ## COG3343 DNA-directed RNA polymerase, delta subunit + Term 91757 - 91794 6.4 + Prom 91823 - 91882 7.6 95 53 Tu 1 . + CDS 92053 - 93663 1983 ## COG0504 CTP synthase (UTP-ammonia lyase) + Term 93671 - 93713 9.1 - Term 93704 - 93743 11.1 96 54 Op 1 7/0.000 - CDS 93747 - 96083 2407 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 97 54 Op 2 . - CDS 96125 - 96742 343 ## COG3331 Penicillin-binding protein-related factor A, putative recombinase - Prom 96919 - 96978 4.4 + Prom 96654 - 96713 9.1 98 55 Tu 1 . + CDS 96805 - 97347 568 ## COG4474 Uncharacterized protein conserved in bacteria 99 56 Tu 1 . - CDS 97365 - 97472 59 ## - Prom 97561 - 97620 4.7 + Prom 97350 - 97409 2.2 100 57 Tu 1 . + CDS 97441 - 97851 508 ## COG3599 Cell division initiation protein + Term 98009 - 98045 -0.3 101 58 Tu 1 . - CDS 97874 - 98053 138 ## - Prom 98079 - 98138 2.2 + Prom 98354 - 98413 7.1 102 59 Op 1 1/0.287 + CDS 98565 - 99728 1343 ## COG0116 Predicted N6-adenine-specific DNA methylase 103 59 Op 2 . + CDS 99746 - 101242 1651 ## COG2317 Zn-dependent carboxypeptidase 104 59 Op 3 6/0.023 + CDS 101275 - 101991 907 ## COG3935 Putative primosome component and related proteins 105 59 Op 4 . + CDS 102006 - 102653 711 ## COG0177 Predicted EndoIII-related endonuclease + Term 102674 - 102719 14.0 + Prom 102737 - 102796 7.3 106 60 Op 1 . + CDS 102827 - 103591 785 ## COG2188 Transcriptional regulators 107 60 Op 2 . + CDS 103588 - 104886 1342 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Prom 104953 - 105012 11.1 108 61 Op 1 . + CDS 105056 - 106009 1064 ## COG1446 Asparaginase 109 61 Op 2 10/0.000 + CDS 106029 - 106358 532 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 110 61 Op 3 . + CDS 106377 - 107732 1465 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 111 61 Op 4 . + CDS 107750 - 108268 609 ## EF1161 hypothetical protein + Term 108285 - 108342 12.9 + Prom 108306 - 108365 3.3 112 62 Op 1 . + CDS 108386 - 110767 1974 ## COG1199 Rad3-related DNA helicases 113 62 Op 2 . + CDS 110764 - 111729 1093 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 114 62 Op 3 . + CDS 111751 - 112434 628 ## EF1164 HD domain-containing protein - Term 112403 - 112445 10.1 115 63 Tu 1 . - CDS 112451 - 112945 678 ## COG1666 Uncharacterized protein conserved in bacteria - Prom 112969 - 113028 4.3 + Prom 113093 - 113152 4.9 116 64 Tu 1 . + CDS 113178 - 114134 990 ## COG1284 Uncharacterized conserved protein + Prom 114161 - 114220 6.9 117 65 Tu 1 . + CDS 114337 - 115206 1358 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 115225 - 115259 5.2 + Prom 115232 - 115291 11.2 118 66 Op 1 1/0.287 + CDS 115380 - 116672 1670 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 119 66 Op 2 9/0.000 + CDS 116687 - 117961 1089 ## COG1158 Transcription termination factor 120 66 Op 3 . + CDS 118031 - 118330 532 ## PROTEIN SUPPORTED gi|227518426|ref|ZP_03948475.1| ribosomal protein L31 + Term 118363 - 118402 8.4 121 67 Tu 1 . - CDS 118599 - 118817 104 ## - Prom 118945 - 119004 8.6 + Prom 118431 - 118490 13.0 122 68 Op 1 1/0.287 + CDS 118721 - 119758 509 ## COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 123 68 Op 2 . + CDS 119748 - 120494 448 ## COG1922 Teichoic acid biosynthesis proteins 124 68 Op 3 . + CDS 120495 - 121088 326 ## EF1174 hypothetical protein 125 68 Op 4 . + CDS 121153 - 121551 389 ## COG0615 Cytidylyltransferase + Term 121552 - 121607 7.0 + Prom 121600 - 121659 4.2 126 69 Op 1 . + CDS 121692 - 122753 740 ## EF1176 hypothetical protein 127 69 Op 2 . + CDS 122746 - 122958 258 ## EF1177 hypothetical protein + Term 122967 - 123012 7.6 + Prom 123056 - 123115 7.1 128 70 Op 1 . + CDS 123185 - 124063 1102 ## COG1940 Transcriptional regulator/sugar kinase + Prom 124068 - 124127 4.6 129 70 Op 2 . + CDS 124154 - 124402 486 ## EF1180 hypothetical protein + Term 124415 - 124465 18.3 - Term 124398 - 124458 19.2 130 71 Op 1 . - CDS 124460 - 125194 785 ## COG0778 Nitroreductase - Term 125212 - 125262 10.4 131 71 Op 2 . - CDS 125278 - 125736 729 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis - Prom 125822 - 125881 10.2 + Prom 125703 - 125762 8.3 132 72 Op 1 3/0.080 + CDS 125943 - 127010 1163 ## COG0136 Aspartate-semialdehyde dehydrogenase 133 72 Op 2 9/0.000 + CDS 127044 - 127916 913 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 134 72 Op 3 . + CDS 127947 - 129635 1772 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily + Term 129651 - 129701 13.0 + Prom 129674 - 129733 5.3 135 73 Op 1 2/0.126 + CDS 129760 - 131142 1314 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 136 73 Op 2 1/0.287 + CDS 131177 - 131818 845 ## COG4470 Uncharacterized protein conserved in bacteria 137 73 Op 3 3/0.080 + CDS 131824 - 132594 1062 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 138 73 Op 4 . + CDS 132597 - 133235 473 ## COG4478 Predicted membrane protein + Term 133237 - 133290 9.6 + Prom 133262 - 133321 6.3 139 74 Op 1 . + CDS 133362 - 133931 708 ## EF1190 hypothetical protein 140 74 Op 2 . + CDS 133924 - 134784 1207 ## COG1307 Uncharacterized protein conserved in bacteria + Term 134785 - 134845 17.0 + Prom 134787 - 134846 6.0 141 75 Tu 1 . + CDS 134938 - 135603 914 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 135609 - 135675 15.9 + Prom 135618 - 135677 6.6 142 76 Op 1 8/0.000 + CDS 135777 - 136481 1065 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 143 76 Op 2 4/0.046 + CDS 136488 - 138317 1921 ## COG5002 Signal transduction histidine kinase 144 76 Op 3 . + CDS 138317 - 139624 1058 ## COG4863 Uncharacterized protein conserved in bacteria 145 76 Op 4 . + CDS 139624 - 140478 705 ## EF1196 hypothetical protein 146 76 Op 5 . + CDS 140535 - 141341 882 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I + Term 141365 - 141420 12.2 + Prom 141468 - 141527 6.6 147 77 Op 1 7/0.000 + CDS 141552 - 142466 913 ## COG0701 Predicted permeases 148 77 Op 2 . + CDS 142485 - 143351 865 ## COG3689 Predicted membrane protein + Term 143357 - 143403 11.1 - Term 143345 - 143391 11.1 149 78 Op 1 12/0.000 - CDS 143403 - 143894 447 ## COG3610 Uncharacterized conserved protein 150 78 Op 2 . - CDS 143909 - 144661 719 ## COG2966 Uncharacterized conserved protein + Prom 144894 - 144953 11.1 151 79 Op 1 6/0.023 + CDS 145097 - 145366 484 ## COG4472 Uncharacterized protein conserved in bacteria 152 79 Op 2 7/0.000 + CDS 145372 - 145785 415 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 153 79 Op 3 . + CDS 145823 - 146128 518 ## COG3906 Uncharacterized protein conserved in bacteria + Term 146142 - 146187 8.0 - Term 146397 - 146436 7.5 154 80 Tu 1 . - CDS 146466 - 146528 228 ## - Prom 146552 - 146611 9.1 + Prom 146339 - 146398 10.6 155 81 Tu 1 . + CDS 146628 - 147476 979 ## MPTP_1291 Cro/CI family transcriptional regulator + Term 147503 - 147550 13.1 - Term 147490 - 147537 6.1 156 82 Op 1 3/0.080 - CDS 147550 - 148719 1437 ## COG0281 Malic enzyme 157 82 Op 2 . - CDS 148751 - 150076 1444 ## COG3493 Na+/citrate symporter - Prom 150102 - 150161 6.7 + Prom 150144 - 150203 8.8 158 83 Op 1 9/0.000 + CDS 150224 - 151774 1566 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism 159 83 Op 2 . + CDS 151755 - 152447 468 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 + Term 152507 - 152566 7.5 + Prom 152453 - 152512 9.0 160 84 Tu 1 . + CDS 152632 - 153975 1855 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases + Term 153982 - 154033 9.4 + Prom 154005 - 154064 8.9 161 85 Op 1 . + CDS 154161 - 154826 1042 ## PEPE_0980 cell surface protein 162 85 Op 2 . + CDS 154813 - 155841 992 ## PEPE_0979 cell surface protein 163 85 Op 3 . + CDS 155858 - 156202 285 ## gi|227518468|ref|ZP_03948517.1| hypothetical protein HMPREF0348_1451 164 85 Op 4 . + CDS 156195 - 158306 1814 ## PEPE_0977 hypothetical protein + Term 158365 - 158406 10.1 + Prom 158397 - 158456 6.7 165 86 Tu 1 . + CDS 158494 - 159957 1074 ## PEPE_0981 hypothetical protein + Term 160067 - 160116 6.1 + Prom 160086 - 160145 9.3 166 87 Op 1 . + CDS 160200 - 160295 158 ## 167 87 Op 2 . + CDS 160308 - 161141 950 ## COG1131 ABC-type multidrug transport system, ATPase component 168 87 Op 3 . + CDS 161145 - 161846 521 ## gi|227518472|ref|ZP_03948521.1| hypothetical protein HMPREF0348_1455 + Term 161872 - 161930 17.7 - Term 161858 - 161917 16.3 169 88 Tu 1 . - CDS 161919 - 162827 1157 ## COG1316 Transcriptional regulator - Prom 162895 - 162954 6.4 + Prom 163011 - 163070 7.7 170 89 Op 1 3/0.080 + CDS 163105 - 164757 1927 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 171 89 Op 2 . + CDS 164769 - 165473 827 ## COG3527 Alpha-acetolactate decarboxylase + Term 165500 - 165550 16.3 + Prom 165548 - 165607 11.9 172 90 Tu 1 . + CDS 165631 - 166713 997 ## EF1215 hypothetical protein + Term 166775 - 166832 15.2 - Term 166763 - 166820 8.2 173 91 Tu 1 . - CDS 166827 - 167546 709 ## EF1216 hypothetical protein - Prom 167571 - 167630 12.6 + Prom 167529 - 167588 8.1 174 92 Tu 1 . + CDS 167795 - 168199 518 ## EF1217 putative lipoprotein + Term 168216 - 168271 11.1 + Prom 168201 - 168260 7.0 175 93 Op 1 36/0.000 + CDS 168407 - 169243 953 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 176 93 Op 2 8/0.000 + CDS 169236 - 170015 765 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 177 93 Op 3 13/0.000 + CDS 170054 - 171094 1126 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 178 93 Op 4 . + CDS 171121 - 172185 1388 ## COG0687 Spermidine/putrescine-binding periplasmic protein 179 93 Op 5 . + CDS 172206 - 173945 1689 ## COG1001 Adenine deaminase 180 93 Op 6 . + CDS 173929 - 175257 1343 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases + Term 175329 - 175380 10.1 + Prom 175354 - 175413 9.2 181 94 Tu 1 . + CDS 175463 - 176332 853 ## EF1224 Cro/CI family transcriptional regulator + Term 176409 - 176449 5.1 + Prom 176442 - 176501 10.6 182 95 Op 1 2/0.126 + CDS 176552 - 177487 924 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 183 95 Op 2 1/0.287 + CDS 177514 - 178122 681 ## COG0431 Predicted flavoprotein 184 95 Op 3 . + CDS 178141 - 179397 1368 ## COG0431 Predicted flavoprotein + Term 179637 - 179672 5.2 + Prom 179624 - 179683 7.0 185 96 Op 1 . + CDS 179809 - 181299 687 ## EF1228 hypothetical protein 186 96 Op 2 . + CDS 181241 - 181924 349 ## EF1229 hypothetical protein 187 96 Op 3 . + CDS 181945 - 182040 181 ## + Term 182056 - 182105 14.2 + Prom 182051 - 182110 6.4 188 97 Tu 1 . + CDS 182248 - 183072 971 ## COG1408 Predicted phosphohydrolases + Term 183076 - 183108 4.0 + Prom 183268 - 183327 10.9 189 98 Op 1 7/0.000 + CDS 183364 - 184275 958 ## COG4209 ABC-type polysaccharide transport system, permease component 190 98 Op 2 14/0.000 + CDS 184290 - 185171 637 ## COG0395 ABC-type sugar transport system, permease component 191 98 Op 3 . + CDS 185189 - 186787 1985 ## COG1653 ABC-type sugar transport system, periplasmic component 192 98 Op 4 . + CDS 186844 - 187437 394 ## EF1235 hypothetical protein 193 98 Op 5 . + CDS 187430 - 188347 815 ## COG3458 Acetyl esterase (deacetylase) 194 98 Op 6 . + CDS 188328 - 189092 639 ## COG3568 Metal-dependent hydrolase 195 98 Op 7 1/0.287 + CDS 189097 - 191247 2470 ## COG1472 Beta-glucosidase-related glycosidases 196 98 Op 8 2/0.126 + CDS 191265 - 194540 2841 ## COG3459 Cellobiose phosphorylase 197 98 Op 9 . + CDS 194556 - 195521 967 ## COG1609 Transcriptional regulators + Term 195532 - 195579 8.4 198 99 Op 1 . - CDS 195554 - 196084 549 ## EF1241 hypothetical protein - Prom 196179 - 196238 5.5 - Term 196237 - 196286 1.4 199 99 Op 2 . - CDS 196355 - 197068 839 ## COG2188 Transcriptional regulators - Prom 197094 - 197153 9.9 + Prom 197111 - 197170 6.6 200 100 Op 1 1/0.287 + CDS 197311 - 198744 1710 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 201 100 Op 2 . + CDS 198769 - 199818 1252 ## COG0673 Predicted dehydrogenases and related proteins + Term 199837 - 199896 16.4 + Prom 200049 - 200108 7.0 202 101 Tu 1 . + CDS 200292 - 200750 503 ## COG2707 Predicted membrane protein + Term 200831 - 200897 31.6 - Term 200753 - 200819 30.0 203 102 Op 1 . - CDS 200891 - 201232 435 ## EF1247 hypothetical protein - Term 201252 - 201295 1.4 204 102 Op 2 . - CDS 201306 - 201569 431 ## EF1248 hypothetical protein - Prom 201619 - 201678 3.0 - Term 201666 - 201706 1.1 205 102 Op 3 . - CDS 201725 - 202996 1337 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP - Prom 203034 - 203093 80.4 206 103 Tu 1 . - CDS 203137 - 203571 482 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP - Prom 203600 - 203659 8.0 + Prom 203690 - 203749 5.7 207 104 Op 1 . + CDS 203791 - 204450 712 ## EF1250 hypothetical protein 208 104 Op 2 . + CDS 204514 - 204621 172 ## + Term 204650 - 204685 2.7 + Prom 205330 - 205389 3.7 209 105 Op 1 9/0.000 + CDS 205430 - 206419 1188 ## COG2984 ABC-type uncharacterized transport system, periplasmic component 210 105 Op 2 13/0.000 + CDS 206444 - 207331 1104 ## COG4120 ABC-type uncharacterized transport system, permease component 211 105 Op 3 . + CDS 207383 - 208096 209 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 208102 - 208136 2.0 - Term 208089 - 208122 1.0 212 106 Op 1 12/0.000 - CDS 208129 - 208590 468 ## COG3610 Uncharacterized conserved protein 213 106 Op 2 . - CDS 208602 - 209378 725 ## COG2966 Uncharacterized conserved protein - Prom 209408 - 209467 6.6 + Prom 209351 - 209410 10.9 214 107 Tu 1 . + CDS 209610 - 209816 223 ## EF1258 hypothetical protein - Term 209776 - 209826 6.2 215 108 Tu 1 . - CDS 209834 - 210613 1032 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 210770 - 210829 7.1 + Prom 210732 - 210791 6.1 216 109 Op 1 40/0.000 + CDS 210828 - 211547 891 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 217 109 Op 2 . + CDS 211547 - 213016 1370 ## COG0642 Signal transduction histidine kinase + Term 213018 - 213066 10.2 - Term 213006 - 213053 11.6 218 110 Op 1 . - CDS 213055 - 213606 602 ## EF1262 hypothetical protein 219 110 Op 2 . - CDS 213621 - 214322 429 ## EF1263 hypothetical protein - Prom 214354 - 214413 5.4 - Term 214375 - 214422 10.7 220 111 Tu 1 . - CDS 214428 - 216536 1946 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Prom 216605 - 216664 7.2 + Prom 216569 - 216628 6.7 221 112 Tu 1 . + CDS 216795 - 217967 1100 ## COG1092 Predicted SAM-dependent methyltransferases + Term 217978 - 218038 19.1 - Term 217974 - 218015 5.1 222 113 Tu 1 . - CDS 218034 - 218951 975 ## COG1039 Ribonuclease HIII - Prom 219147 - 219206 3.5 223 114 Tu 1 . + CDS 219176 - 221590 2088 ## COG0474 Cation transport ATPase + Term 221591 - 221649 14.9 + Prom 221593 - 221652 8.0 224 115 Tu 1 . + CDS 221732 - 223618 1715 ## COG4932 Predicted outer membrane protein + Term 223654 - 223686 -0.2 + Prom 223659 - 223718 4.8 225 116 Op 1 32/0.000 + CDS 223824 - 224297 590 ## COG0779 Uncharacterized protein conserved in bacteria + Prom 224312 - 224371 2.3 226 116 Op 2 22/0.000 + CDS 224441 - 225640 787 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 227 116 Op 3 8/0.000 + CDS 225661 - 225960 496 ## COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination 228 116 Op 4 10/0.000 + CDS 225950 - 226255 495 ## PROTEIN SUPPORTED gi|29375842|ref|NP_814996.1| ribosomal protein L7A family protein 229 116 Op 5 32/0.000 + CDS 226268 - 228664 2689 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 230 116 Op 6 . + CDS 228689 - 229039 609 ## COG0858 Ribosome-binding factor A + Term 229041 - 229100 15.0 231 117 Tu 1 . + CDS 229122 - 229352 75 ## gi|227518536|ref|ZP_03948585.1| hypothetical protein HMPREF0348_1519 + Term 229373 - 229421 13.0 232 118 Op 1 . - CDS 229412 - 229885 524 ## EF1276 hypothetical protein 233 118 Op 2 . - CDS 229932 - 230414 556 ## COG1396 Predicted transcriptional regulators - Prom 230635 - 230694 11.6 + Prom 230395 - 230454 6.3 234 119 Op 1 . + CDS 230632 - 230766 208 ## 235 119 Op 2 . + CDS 230797 - 231567 685 ## EF1279 DNA replication protein, putative 236 119 Op 3 . + CDS 231586 - 232428 780 ## COG1484 DNA replication protein 237 119 Op 4 . + CDS 232431 - 232523 194 ## 238 119 Op 5 . + CDS 232516 - 232887 326 ## EF1282 hypothetical protein 239 119 Op 6 . + CDS 232907 - 233314 589 ## EF1283 RinA family transcriptional regulator + Prom 233335 - 233394 4.2 240 120 Op 1 . + CDS 233560 - 233952 456 ## EF1284 structural protein, putative 241 120 Op 2 . + CDS 233965 - 234477 909 ## EF1285 major tail protein 242 120 Op 3 . + CDS 234510 - 234869 480 ## EF1286 hypothetical protein + Term 234877 - 234917 7.5 243 121 Op 1 . + CDS 234962 - 235255 261 ## EF1287 hypothetical protein 244 121 Op 2 . + CDS 235245 - 238178 3509 ## COG5412 Phage-related protein 245 121 Op 3 . + CDS 238180 - 239106 1216 ## EF1289 tail protein, putative 246 121 Op 4 . + CDS 239119 - 240576 1276 ## EF1290 structural protein, putative 247 121 Op 5 . + CDS 240609 - 242378 1732 ## EF1291 hypothetical protein 248 121 Op 6 . + CDS 242402 - 242797 432 ## COG4824 Phage-related holin (Lysis protein) + Term 242882 - 242932 14.4 + Prom 242853 - 242912 2.3 249 122 Tu 1 . + CDS 242943 - 244040 1287 ## COG5263 FOG: Glucan-binding domain (YG repeat) + Term 244046 - 244092 11.1 + Prom 244105 - 244164 4.9 250 123 Tu 1 . + CDS 244194 - 244319 143 ## COG0130 Pseudouridine synthase + Prom 244321 - 244380 80.3 251 124 Op 1 12/0.000 + CDS 244624 - 245370 787 ## COG0130 Pseudouridine synthase 252 124 Op 2 . + CDS 245396 - 246346 613 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 253 124 Op 3 . + CDS 246346 - 246942 602 ## COG3153 Predicted acetyltransferase + Term 246953 - 247005 17.2 + Prom 246995 - 247054 5.8 254 125 Op 1 3/0.080 + CDS 247092 - 247433 307 ## COG1695 Predicted transcriptional regulators 255 125 Op 2 . + CDS 247420 - 247761 468 ## COG4817 Uncharacterized protein conserved in bacteria 256 125 Op 3 . + CDS 247787 - 248047 334 ## EF1299 hypothetical protein + Term 248104 - 248138 -0.8 + Prom 248121 - 248180 7.0 257 126 Op 1 2/0.126 + CDS 248206 - 249381 948 ## COG0772 Bacterial cell division membrane protein 258 126 Op 2 . + CDS 249347 - 250420 800 ## COG0772 Bacterial cell division membrane protein + Term 250504 - 250568 11.8 - Term 250492 - 250555 13.3 259 127 Op 1 9/0.000 - CDS 250556 - 251443 795 ## COG0583 Transcriptional regulator 260 127 Op 2 . - CDS 251467 - 252342 810 ## COG0583 Transcriptional regulator - Prom 252367 - 252426 6.3 + Prom 252717 - 252776 2.8 261 128 Op 1 . + CDS 252821 - 252910 98 ## 262 128 Op 2 . + CDS 252879 - 255539 2478 ## COG0474 Cation transport ATPase + Term 255592 - 255634 3.1 + Prom 255633 - 255692 5.3 263 129 Tu 1 . + CDS 255747 - 256931 1175 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Term 256945 - 256988 6.1 + Prom 257048 - 257107 7.8 264 130 Op 1 21/0.000 + CDS 257157 - 258200 1165 ## COG1420 Transcriptional regulator of heat shock gene 265 130 Op 2 29/0.000 + CDS 258255 - 258794 834 ## COG0576 Molecular chaperone GrpE (heat shock protein) 266 130 Op 3 . + CDS 258854 - 260683 2484 ## COG0443 Molecular chaperone + Term 260703 - 260754 7.4 + Prom 260719 - 260778 2.5 267 131 Op 1 . + CDS 260798 - 260920 118 ## EF1309 hypothetical protein 268 131 Op 2 . + CDS 260975 - 262144 1543 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 262261 - 262313 14.2 + Prom 262289 - 262348 12.3 269 132 Op 1 . + CDS 262383 - 263117 748 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases + Prom 263127 - 263186 5.6 270 132 Op 2 6/0.023 + CDS 263215 - 265407 195 ## PROTEIN SUPPORTED gi|229231694|ref|ZP_04356122.1| SSU ribosomal protein S1P 271 132 Op 3 . + CDS 265410 - 265895 326 ## COG3091 Uncharacterized protein conserved in bacteria + Term 265901 - 265943 9.6 + TRNA 265964 - 266050 56.4 # Leu GAG 0 0 + Prom 266266 - 266325 70.4 272 133 Tu 1 . + CDS 266446 - 267663 1113 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 267666 - 267723 17.0 - Term 267654 - 267711 19.5 273 134 Tu 1 . - CDS 267729 - 267905 306 ## EF1315 hypothetical protein - Prom 268097 - 268156 4.6 + Prom 267858 - 267917 6.5 274 135 Op 1 . + CDS 268083 - 268910 928 ## EF1316 Cro/CI family transcriptional regulator + Prom 268925 - 268984 3.1 275 135 Op 2 . + CDS 269011 - 270159 1556 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase + Term 270167 - 270213 7.8 - Term 270161 - 270196 5.0 276 136 Op 1 . - CDS 270202 - 270588 611 ## EF1318 hypothetical protein 277 136 Op 2 . - CDS 270602 - 271261 707 ## EF1319 hypothetical protein - Prom 271314 - 271373 6.0 + Prom 271233 - 271292 5.7 278 137 Op 1 36/0.000 + CDS 271422 - 272123 344 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 279 137 Op 2 . + CDS 272133 - 274769 2233 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Prom 274872 - 274931 6.2 280 138 Op 1 . + CDS 274962 - 275486 587 ## EF1322 hypothetical protein 281 138 Op 2 . + CDS 275503 - 276972 2149 ## COG2268 Uncharacterized protein conserved in bacteria + Term 276987 - 277026 6.0 282 139 Tu 1 . + CDS 277119 - 277352 378 ## EF1324 hypothetical protein + Term 277364 - 277420 7.1 + TRNA 277449 - 277529 72.8 # Tyr GTA 0 0 + TRNA 277539 - 277610 67.6 # Gln TTG 0 0 283 140 Tu 1 . + CDS 277765 - 277944 248 ## EF1325 hypothetical protein + Term 277958 - 278012 14.0 - Term 277948 - 277996 14.1 284 141 Tu 1 . - CDS 278000 - 278608 572 ## COG1309 Transcriptional regulator - Prom 278716 - 278775 8.4 + Prom 278660 - 278719 8.3 285 142 Tu 1 . + CDS 278787 - 283034 3515 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) + Term 283060 - 283109 6.1 + Prom 283154 - 283213 7.3 286 143 Tu 1 . + CDS 283241 - 283948 875 ## COG2188 Transcriptional regulators + Prom 283950 - 284009 3.5 287 144 Tu 1 . + CDS 284052 - 284120 119 ## + Term 284319 - 284358 3.2 + Prom 284221 - 284280 6.0 288 145 Op 1 . + CDS 284477 - 284542 117 ## + Term 284565 - 284598 4.0 289 145 Op 2 . + CDS 284611 - 285744 688 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 290 145 Op 3 . + CDS 285708 - 286508 224 ## EF1330 hypothetical protein 291 145 Op 4 . + CDS 286531 - 287475 265 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 292 145 Op 5 . + CDS 287453 - 288211 176 ## EF1332 hypothetical protein 293 145 Op 6 . + CDS 288220 - 288933 213 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 294 146 Tu 1 . - CDS 289661 - 290275 126 ## EF1335 sensor histidine kinase, putative - Prom 290326 - 290385 8.3 + Prom 290218 - 290277 7.9 295 147 Tu 1 . + CDS 290438 - 290608 187 ## gi|315166691|gb|EFU10708.1| hypothetical protein HMPREF9517_02719 - Term 290856 - 290923 31.1 296 148 Tu 1 . - CDS 291099 - 291803 389 ## COG3279 Response regulator of the LytR/AlgR family - Prom 291829 - 291888 9.8 + Prom 292276 - 292335 2.7 297 149 Op 1 . + CDS 292380 - 292811 273 ## EF1337 hypothetical protein + Prom 292817 - 292876 6.3 298 149 Op 2 . + CDS 292980 - 293894 630 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 294124 - 294190 30.0 299 150 Op 1 . - CDS 294179 - 294631 587 ## EF1339 hypothetical protein - Prom 294657 - 294716 8.3 300 150 Op 2 . - CDS 294828 - 295328 619 ## EF1340 pheromone cAM373 precursor lipoprotein - Prom 295360 - 295419 10.6 + Prom 295225 - 295284 7.2 301 151 Tu 1 . + CDS 295327 - 295419 95 ## - Term 295384 - 295445 8.1 302 152 Tu 1 . - CDS 295447 - 297786 2503 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component + Prom 297706 - 297765 8.6 303 153 Tu 1 . + CDS 297932 - 298420 485 ## EF1342 MarR family transcriptional regulator + Term 298425 - 298463 5.4 - Term 298412 - 298451 8.1 304 154 Op 1 20/0.000 - CDS 298458 - 299321 715 ## COG3833 ABC-type maltose transport systems, permease component 305 154 Op 2 19/0.000 - CDS 299325 - 300668 977 ## COG1175 ABC-type sugar transport systems, permease components - Prom 300693 - 300752 5.5 - Term 300696 - 300743 7.0 306 154 Op 3 . - CDS 300754 - 302004 1640 ## COG2182 Maltose-binding periplasmic proteins/domains - Prom 302149 - 302208 13.2 + Prom 302108 - 302167 6.8 307 155 Op 1 . + CDS 302189 - 302263 85 ## 308 155 Op 2 7/0.000 + CDS 302264 - 304030 1561 ## COG0366 Glycosidases 309 155 Op 3 7/0.000 + CDS 304058 - 305683 1598 ## COG0366 Glycosidases 310 155 Op 4 . + CDS 305685 - 307298 1436 ## COG0366 Glycosidases + Term 307316 - 307367 12.0 + Prom 307371 - 307430 10.2 311 156 Tu 1 . + CDS 307469 - 308050 649 ## COG3548 Predicted integral membrane protein 312 157 Tu 1 . + CDS 308526 - 311135 2708 ## COG0474 Cation transport ATPase + Prom 311585 - 311644 6.0 313 158 Op 1 28/0.000 + CDS 311734 - 312849 1681 ## COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 314 158 Op 2 24/0.000 + CDS 312852 - 313829 1314 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit + Prom 313852 - 313911 1.6 315 158 Op 3 30/0.000 + CDS 313972 - 315591 1987 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 316 158 Op 4 . + CDS 315599 - 317005 786 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 317040 - 317092 8.6 - Term 318621 - 318654 2.3 317 159 Tu 1 . - CDS 318660 - 319646 795 ## COG4936 Predicted sensor domain - Prom 319815 - 319874 5.7 + Prom 319662 - 319721 8.1 318 160 Op 1 . + CDS 319807 - 320946 1390 ## COG0371 Glycerol dehydrogenase and related enzymes 319 160 Op 2 . + CDS 320959 - 321204 192 ## EF1359 hypothetical protein 320 160 Op 3 . + CDS 321113 - 321358 248 ## EF1359 hypothetical protein 321 160 Op 4 10/0.000 + CDS 321359 - 322342 1435 ## COG2376 Dihydroxyacetone kinase 322 160 Op 5 . + CDS 322355 - 322957 851 ## COG2376 Dihydroxyacetone kinase + Term 322971 - 323020 9.1 + Prom 322997 - 323056 10.6 323 161 Tu 1 . + CDS 323096 - 323863 757 ## EF1362 hypothetical protein + Term 323867 - 323916 15.6 - Term 323854 - 323904 15.0 324 162 Tu 1 . - CDS 323936 - 325087 1430 ## COG3425 3-hydroxy-3-methylglutaryl CoA synthase - Prom 325169 - 325228 6.6 + Prom 325054 - 325113 6.8 325 163 Tu 1 . + CDS 325273 - 327684 2665 ## COG1257 Hydroxymethylglutaryl-CoA reductase + Term 327692 - 327729 7.3 326 164 Op 1 . - CDS 327704 - 328756 873 ## COG0628 Predicted permease 327 164 Op 2 . - CDS 328773 - 329978 988 ## COG1434 Uncharacterized conserved protein - Prom 330045 - 330104 8.3 - Term 330080 - 330111 2.1 328 165 Tu 1 . - CDS 330134 - 330334 333 ## COG1278 Cold shock proteins - Prom 330367 - 330426 5.1 - Term 330574 - 330618 9.1 329 166 Tu 1 . - CDS 330632 - 331753 1194 ## EF1368 hypothetical protein - Prom 331882 - 331941 6.9 330 167 Tu 1 . - CDS 332092 - 332442 381 ## COG1396 Predicted transcriptional regulators - Prom 332467 - 332526 6.0 + Prom 332542 - 332601 4.0 331 168 Tu 1 . + CDS 332634 - 333056 434 ## COG0477 Permeases of the major facilitator superfamily + Term 333300 - 333333 -0.4 332 169 Tu 1 . + CDS 333415 - 334305 714 ## COG0477 Permeases of the major facilitator superfamily + Term 334313 - 334366 16.2 + Prom 334359 - 334418 4.0 333 170 Op 1 1/0.287 + CDS 334510 - 335184 823 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 334 170 Op 2 3/0.080 + CDS 335194 - 336513 1293 ## COG4109 Predicted transcriptional regulator containing CBS domains 335 170 Op 3 . + CDS 336527 - 337480 926 ## PROTEIN SUPPORTED gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B + Prom 337507 - 337566 7.6 336 171 Tu 1 . + CDS 337594 - 337932 402 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism + Term 337955 - 338007 13.3 - Term 337943 - 337992 11.9 337 172 Tu 1 . - CDS 337993 - 338304 397 ## EF1375 hypothetical protein - Prom 338445 - 338504 8.2 + Prom 338326 - 338385 7.9 338 173 Op 1 . + CDS 338447 - 339628 687 ## COG4767 Glycopeptide antibiotics resistance protein 339 173 Op 2 . + CDS 339691 - 341040 1548 ## COG0513 Superfamily II DNA and RNA helicases + Term 341062 - 341110 13.4 + Prom 341367 - 341426 10.6 340 174 Tu 1 . + CDS 341587 - 342270 472 ## EF1378 transcriptional regulator, putative + Term 342311 - 342362 3.0 341 175 Tu 1 . + CDS 342616 - 345258 3452 ## COG0013 Alanyl-tRNA synthetase + Term 345319 - 345366 9.4 + Prom 345317 - 345376 5.2 342 176 Op 1 9/0.000 + CDS 345461 - 346177 901 ## COG2384 Predicted SAM-dependent methyltransferase 343 176 Op 2 . + CDS 346161 - 347279 1294 ## COG0327 Uncharacterized conserved protein 344 176 Op 3 . + CDS 347309 - 348538 1739 ## COG2195 Di- and tripeptidases + Term 348549 - 348609 1.8 + Prom 348600 - 348659 6.3 345 177 Op 1 . + CDS 348684 - 348950 263 ## COG3326 Predicted membrane protein 346 177 Op 2 . + CDS 348970 - 349998 864 ## COG0392 Predicted integral membrane protein + Term 350003 - 350047 13.4 + Prom 350028 - 350087 10.1 347 178 Op 1 . + CDS 350139 - 350714 386 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 348 178 Op 2 . + CDS 350730 - 351554 666 ## COG2116 Formate/nitrite family of transporters 349 178 Op 3 . + CDS 351544 - 352125 534 ## EF1387 hypothetical protein 350 178 Op 4 23/0.000 + CDS 352113 - 352601 661 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 351 178 Op 5 2/0.126 + CDS 352613 - 353911 1088 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 352 178 Op 6 . + CDS 353914 - 356634 2439 ## COG3383 Uncharacterized anaerobic dehydrogenase 353 178 Op 7 5/0.023 + CDS 356652 - 357854 859 ## COG0303 Molybdopterin biosynthesis enzyme 354 179 Op 1 6/0.023 + CDS 358868 - 359350 390 ## COG0315 Molybdenum cofactor biosynthesis enzyme 355 179 Op 2 . + CDS 359356 - 360321 770 ## COG2896 Molybdenum cofactor biosynthesis enzyme 356 179 Op 3 . + CDS 360324 - 360758 364 ## COG2258 Uncharacterized protein conserved in bacteria 357 179 Op 4 3/0.080 + CDS 360751 - 361233 244 ## PROTEIN SUPPORTED gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 358 179 Op 5 1/0.287 + CDS 361237 - 362208 921 ## COG0303 Molybdopterin biosynthesis enzyme 359 179 Op 6 23/0.000 + CDS 362227 - 363027 918 ## COG0725 ABC-type molybdate transport system, periplasmic component 360 179 Op 7 6/0.023 + CDS 363036 - 363707 590 ## COG4149 ABC-type molybdate transport system, permease component 361 179 Op 8 . + CDS 363704 - 364708 784 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component + Term 364776 - 364813 1.7 + Prom 364711 - 364770 6.1 362 180 Tu 1 . + CDS 364830 - 366932 2491 ## COG2217 Cation transport ATPase + Term 366946 - 366983 3.1 363 181 Op 1 . - CDS 366929 - 367021 58 ## 364 181 Op 2 . - CDS 367053 - 367238 75 ## gi|229545914|ref|ZP_04434639.1| hypothetical protein HMPREF0349_1131 - Prom 367273 - 367332 3.6 + Prom 367110 - 367169 5.5 365 182 Op 1 . + CDS 367201 - 367644 581 ## EF1402 hypothetical protein 366 182 Op 2 3/0.080 + CDS 367664 - 368212 452 ## COG1286 Uncharacterized membrane protein, required for colicin V production 367 183 Op 1 3/0.080 + CDS 368323 - 370689 2940 ## COG1193 Mismatch repair ATPase (MutS family) + Prom 370696 - 370755 7.1 368 183 Op 2 4/0.046 + CDS 370787 - 371101 564 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 371133 - 371186 11.0 + Prom 371180 - 371239 8.2 369 184 Tu 1 . + CDS 371266 - 373062 1694 ## COG0322 Nuclease subunit of the excinuclease complex + Term 373071 - 373123 9.6 + Prom 373065 - 373124 4.9 370 185 Tu 1 . + CDS 373214 - 373471 287 ## EF1407 hypothetical protein + Prom 373477 - 373536 6.0 371 186 Op 1 9/0.000 + CDS 373576 - 374475 276 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 372 186 Op 2 . + CDS 374468 - 375730 1129 ## COG1668 ABC-type Na+ efflux pump, permease component + Term 375750 - 375802 14.2 373 187 Tu 1 . - CDS 375766 - 376764 1009 ## COG1609 Transcriptional regulators - Prom 376873 - 376932 8.9 + Prom 376809 - 376868 8.8 374 188 Tu 1 . + CDS 376906 - 378300 1567 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases + Term 378305 - 378351 11.2 375 189 Tu 1 . - CDS 378326 - 378760 573 ## EF1412 hypothetical protein - Prom 378824 - 378883 4.0 + Prom 378962 - 379021 2.0 376 190 Tu 1 . + CDS 379048 - 380544 1224 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 380551 - 380601 15.7 - Term 380543 - 380583 10.1 377 191 Tu 1 . - CDS 380585 - 381871 1139 ## COG2081 Predicted flavoproteins - Prom 381928 - 381987 4.5 + Prom 381927 - 381986 5.4 378 192 Op 1 . + CDS 382009 - 383355 1665 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 383356 - 383407 9.2 + Prom 383374 - 383433 8.1 379 192 Op 2 . + CDS 383537 - 384886 1917 ## COG0166 Glucose-6-phosphate isomerase + Term 384895 - 384963 24.0 - Term 384883 - 384949 24.2 380 193 Op 1 . - CDS 384952 - 385131 230 ## EF1490 hypothetical protein 381 193 Op 2 . - CDS 385190 - 385633 578 ## COG1780 Protein involved in ribonucleotide reduction - Prom 385738 - 385797 10.6 + Prom 385697 - 385756 9.1 382 194 Op 1 . + CDS 386005 - 386328 541 ## EF1492 V-type ATPase, subunit F 383 194 Op 2 16/0.000 + CDS 386318 - 388297 2007 ## COG1269 Archaeal/vacuolar-type H+-ATPase subunit I 384 194 Op 3 . + CDS 388325 - 388798 813 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 385 194 Op 4 . + CDS 388815 - 389396 906 ## EF1495 V-type ATPase, subunit E 386 194 Op 5 13/0.000 + CDS 389413 - 390414 1022 ## COG1527 Archaeal/vacuolar-type H+-ATPase subunit C 387 194 Op 6 12/0.000 + CDS 390404 - 390715 417 ## COG1436 Archaeal/vacuolar-type H+-ATPase subunit F 388 194 Op 7 16/0.000 + CDS 390733 - 392514 2262 ## COG1155 Archaeal/vacuolar-type H+-ATPase subunit A 389 194 Op 8 16/0.000 + CDS 392507 - 393883 1825 ## COG1156 Archaeal/vacuolar-type H+-ATPase subunit B 390 194 Op 9 . + CDS 393888 - 394523 700 ## COG1394 Archaeal/vacuolar-type H+-ATPase subunit D + Term 394537 - 394584 3.2 391 194 Op 10 . + CDS 394598 - 394918 453 ## EF1501 hypothetical protein + Term 395006 - 395075 24.0 - Term 395003 - 395054 12.4 392 195 Op 1 . - CDS 395067 - 395657 617 ## EF1502 beta-lactamase, putative 393 195 Op 2 . - CDS 395602 - 396009 280 ## EF1502 beta-lactamase, putative 394 195 Op 3 . - CDS 396104 - 397984 1603 ## COG3855 Uncharacterized protein conserved in bacteria - Prom 398038 - 398097 6.7 + Prom 397806 - 397865 8.0 395 196 Op 1 . + CDS 398067 - 398165 64 ## 396 196 Op 2 . + CDS 398200 - 399492 1391 ## COG0019 Diaminopimelate decarboxylase + Term 399504 - 399541 1.1 + Prom 399494 - 399553 7.2 397 197 Tu 1 . + CDS 399638 - 400630 845 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 400635 - 400672 1.5 398 198 Tu 1 . - CDS 400646 - 401179 328 ## EF1506 hypothetical protein + Prom 401368 - 401427 4.5 399 199 Op 1 . + CDS 401467 - 401850 230 ## EF1507 hypothetical protein 400 199 Op 2 . + CDS 401819 - 402301 160 ## EF1508 hypothetical protein + Prom 402336 - 402395 5.6 401 200 Tu 1 . + CDS 402514 - 403053 482 ## EF1509 hypothetical protein + Term 403090 - 403137 9.1 - Term 403068 - 403134 15.1 402 201 Tu 1 . - CDS 403151 - 403495 619 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme - Prom 403624 - 403683 9.8 + Prom 403564 - 403623 5.8 403 202 Op 1 1/0.287 + CDS 403771 - 404835 1067 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 404 202 Op 2 . + CDS 404852 - 406228 1029 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases 405 202 Op 3 . + CDS 406246 - 407898 1571 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 407913 - 407944 1.1 + Prom 407976 - 408035 10.5 406 203 Op 1 7/0.000 + CDS 408208 - 409041 882 ## COG3711 Transcriptional antiterminator 407 203 Op 2 . + CDS 409078 - 411075 2574 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 408 203 Op 3 . + CDS 411115 - 411210 57 ## + Prom 411213 - 411272 5.2 409 203 Op 4 . + CDS 411335 - 411919 755 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 411922 - 411989 17.4 + Prom 411950 - 412009 5.0 410 204 Op 1 . + CDS 412048 - 414384 2399 ## COG0474 Cation transport ATPase + Term 414493 - 414545 13.1 + Prom 414540 - 414599 4.0 411 204 Op 2 . + CDS 414701 - 416389 1600 ## COG0358 DNA primase (bacterial type) + Term 416527 - 416593 30.0 + Prom 416806 - 416865 2.9 412 205 Op 1 . + CDS 416894 - 418000 1482 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 418013 - 418056 11.5 + Prom 418061 - 418120 4.5 413 205 Op 2 . + CDS 418152 - 420227 2376 ## EF1523 hypothetical protein + Term 420241 - 420289 11.0 414 206 Op 1 . + CDS 420301 - 421182 525 ## PROTEIN SUPPORTED gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains + Prom 421184 - 421243 8.2 415 206 Op 2 . + CDS 421298 - 421747 481 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 421972 - 422037 19.0 - Term 421741 - 421800 2.2 416 207 Tu 1 . - CDS 422045 - 423055 1135 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 423124 - 423183 5.7 + Prom 423219 - 423278 4.5 417 208 Tu 1 . + CDS 423343 - 424659 1786 ## COG0536 Predicted GTPase + Term 424663 - 424707 7.1 + Prom 424703 - 424762 11.3 418 209 Op 1 . + CDS 424798 - 425100 326 ## EF1528 hypothetical protein 419 209 Op 2 . + CDS 425127 - 426425 1547 ## COG1455 Phosphotransferase system cellobiose-specific component IIC + Term 426440 - 426494 17.0 + Prom 426515 - 426574 10.2 420 210 Op 1 . + CDS 426650 - 427189 610 ## EF1531 TetR family transcriptional regulator + Prom 427236 - 427295 4.7 421 210 Op 2 . + CDS 427332 - 427706 511 ## COG5294 Uncharacterized protein conserved in bacteria + Term 427808 - 427871 2.2 - Term 427711 - 427777 30.0 422 211 Tu 1 . - CDS 427888 - 428637 822 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 428778 - 428837 7.1 + Prom 428740 - 428799 8.3 423 212 Op 1 . + CDS 428819 - 429910 1245 ## COG3589 Uncharacterized conserved protein + Term 429939 - 429988 10.2 + Prom 430019 - 430078 8.9 424 212 Op 2 . + CDS 430105 - 431034 1103 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 431066 - 431123 17.5 + Prom 431116 - 431175 6.1 425 213 Op 1 . + CDS 431203 - 432093 1026 ## COG4974 Site-specific recombinase XerD 426 213 Op 2 21/0.000 + CDS 432167 - 432952 874 ## COG1354 Uncharacterized conserved protein 427 213 Op 3 12/0.000 + CDS 432949 - 433554 803 ## COG1386 Predicted transcriptional regulator containing the HTH domain 428 213 Op 4 . + CDS 433558 - 434274 955 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Term 434287 - 434330 7.1 + Prom 434347 - 434406 5.1 429 214 Op 1 . + CDS 434617 - 435282 533 ## COG3601 Predicted membrane protein + Term 435287 - 435343 11.3 + Prom 435378 - 435437 6.3 430 214 Op 2 . + CDS 435463 - 436869 1178 ## COG4640 Predicted membrane protein + Term 436870 - 436920 17.3 - Term 436749 - 436788 -0.1 431 215 Tu 1 . - CDS 436892 - 437110 242 ## COG1141 Ferredoxin - Prom 437154 - 437213 6.8 + Prom 436894 - 436953 5.4 432 216 Op 1 4/0.046 + CDS 437146 - 438180 713 ## COG4955 Uncharacterized protein conserved in bacteria 433 216 Op 2 . + CDS 438187 - 439623 1283 ## COG0514 Superfamily II DNA helicase 434 216 Op 3 . + CDS 439699 - 440325 753 ## EF1546 LysM domain-containing protein + Term 440402 - 440455 11.3 + Prom 440459 - 440518 5.0 435 217 Op 1 21/0.000 + CDS 440562 - 441242 804 ## COG0283 Cytidylate kinase + Prom 441248 - 441307 7.8 436 217 Op 2 3/0.080 + CDS 441356 - 442567 2025 ## PROTEIN SUPPORTED gi|29376111|ref|NP_815265.1| 30S ribosomal protein S1 + Term 442590 - 442644 15.3 + Prom 442655 - 442714 4.3 437 218 Tu 1 . + CDS 442741 - 444051 1725 ## COG1160 Predicted GTPases + Term 444186 - 444227 -0.1 + Prom 444087 - 444146 6.6 438 219 Tu 1 . + CDS 444299 - 444574 179 ## PROTEIN SUPPORTED gi|148826039|ref|YP_001290792.1| 50S ribosomal protein L35 + Term 444587 - 444622 7.1 + Prom 444589 - 444648 6.4 439 220 Op 1 . + CDS 444881 - 445921 850 ## EF1552 hypothetical protein 440 220 Op 2 4/0.046 + CDS 445931 - 447187 1743 ## COG0457 FOG: TPR repeat 441 220 Op 3 . + CDS 447197 - 447736 570 ## COG5582 Uncharacterized conserved protein + Term 447905 - 447971 30.0 - Term 447751 - 447819 30.4 442 221 Tu 1 . - CDS 447967 - 448851 958 ## COG1284 Uncharacterized conserved protein - Prom 448871 - 448930 2.1 + Prom 448781 - 448840 8.0 443 222 Op 1 3/0.080 + CDS 448975 - 449325 458 ## COG1694 Predicted pyrophosphatase 444 222 Op 2 1/0.287 + CDS 449318 - 450097 949 ## COG0289 Dihydrodipicolinate reductase 445 222 Op 3 . + CDS 450040 - 451314 1227 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 446 222 Op 4 . + CDS 451314 - 451688 463 ## COG5496 Predicted thioesterase + Prom 451691 - 451750 3.9 447 222 Op 5 . + CDS 451778 - 452233 606 ## EF1560 hypothetical protein + Term 452242 - 452287 11.3 + Prom 452627 - 452686 2.5 448 223 Op 1 . + CDS 452722 - 453588 837 ## COG0169 Shikimate 5-dehydrogenase 449 223 Op 2 . + CDS 453625 - 453783 347 ## EF1562 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54) + Prom 453785 - 453844 80.3 450 224 Op 1 3/0.080 + CDS 453919 - 454662 947 ## COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 451 224 Op 2 7/0.000 + CDS 454685 - 455761 1216 ## COG0337 3-dehydroquinate synthetase 452 224 Op 3 1/0.287 + CDS 455763 - 456929 1426 ## COG0082 Chorismate synthase 453 224 Op 4 6/0.023 + CDS 456963 - 458057 1020 ## COG0287 Prephenate dehydrogenase 454 224 Op 5 5/0.023 + CDS 458070 - 459350 1344 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 455 224 Op 6 2/0.126 + CDS 459370 - 459876 577 ## COG0703 Shikimate kinase 456 224 Op 7 1/0.287 + CDS 459884 - 460732 816 ## COG0077 Prephenate dehydratase + Term 460745 - 460798 11.4 + Prom 460783 - 460842 5.7 457 225 Op 1 . + CDS 460876 - 462048 979 ## COG1316 Transcriptional regulator 458 225 Op 2 . + CDS 462124 - 462972 916 ## COG1307 Uncharacterized protein conserved in bacteria + Term 462973 - 463027 14.5 + Prom 463031 - 463090 8.9 459 226 Op 1 . + CDS 463166 - 463360 237 ## EF1571 hypothetical protein 460 226 Op 2 . + CDS 463372 - 463848 445 ## EF1572 hypothetical protein + Prom 463905 - 463964 9.4 461 227 Op 1 . + CDS 463992 - 464258 289 ## EF1573 hypothetical protein 462 227 Op 2 . + CDS 464294 - 466348 2229 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters + Term 466355 - 466407 9.0 - Term 466343 - 466394 1.2 463 228 Tu 1 . - CDS 466400 - 466495 85 ## - Prom 466581 - 466640 2.2 + Prom 466354 - 466413 8.9 464 229 Op 1 1/0.287 + CDS 466459 - 468348 2154 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 465 229 Op 2 16/0.000 + CDS 468366 - 469313 1194 ## COG0207 Thymidylate synthase 466 229 Op 3 . + CDS 469331 - 469825 608 ## COG0262 Dihydrofolate reductase 467 229 Op 4 . + CDS 469849 - 471018 1126 ## COG1600 Uncharacterized Fe-S protein + Term 471146 - 471181 -1.0 - Term 470986 - 471023 2.4 468 230 Tu 1 . - CDS 471032 - 471652 668 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 471676 - 471735 6.2 + Prom 471721 - 471780 6.0 469 231 Op 1 4/0.046 + CDS 471803 - 472045 418 ## COG4224 Uncharacterized protein conserved in bacteria 470 231 Op 2 . + CDS 472117 - 474111 2584 ## COG0021 Transketolase + Term 474120 - 474174 15.3 - Term 474107 - 474162 11.7 471 232 Tu 1 . - CDS 474164 - 475354 1099 ## COG0477 Permeases of the major facilitator superfamily - Prom 475472 - 475531 8.0 + Prom 475458 - 475517 6.9 472 233 Tu 1 . + CDS 475709 - 476569 1023 ## COG1705 Muramidase (flagellum-specific) + Term 476595 - 476638 10.3 + Prom 476677 - 476736 10.2 473 234 Op 1 . + CDS 476798 - 477730 1048 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Term 477747 - 477791 1.1 + Prom 477784 - 477843 6.0 474 234 Op 2 . + CDS 477869 - 478312 570 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 478372 - 478414 9.2 + Prom 478435 - 478494 8.5 475 235 Tu 1 . + CDS 478610 - 479950 1682 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases + Term 479966 - 480003 7.3 - Term 479954 - 479991 7.3 476 236 Tu 1 . - CDS 479998 - 480606 704 ## COG1051 ADP-ribose pyrophosphatase - Prom 480821 - 480880 11.0 + Prom 480700 - 480759 4.8 477 237 Op 1 1/0.287 + CDS 480813 - 481283 336 ## COG0456 Acetyltransferases 478 237 Op 2 . + CDS 481303 - 481830 524 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 479 238 Tu 1 . - CDS 481885 - 482703 758 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 482887 - 482946 8.5 + Prom 482687 - 482746 7.1 480 239 Op 1 35/0.000 + CDS 482840 - 484588 225 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 481 239 Op 2 1/0.287 + CDS 484581 - 486359 232 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 486369 - 486413 5.1 + Prom 486361 - 486420 3.1 482 240 Tu 1 . + CDS 486448 - 486873 457 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 486933 - 486974 5.2 + Prom 486917 - 486976 8.2 483 241 Tu 1 . + CDS 487013 - 488023 1230 ## EF1596 putative lipoprotein + Term 488069 - 488107 5.4 + Prom 488242 - 488301 10.0 484 242 Tu 1 . + CDS 488326 - 489762 1393 ## COG0753 Catalase + Term 489777 - 489832 7.4 - Term 489912 - 489970 -0.7 485 243 Tu 1 . - CDS 489975 - 491408 1284 ## COG0415 Deoxyribodipyrimidine photolyase - Prom 491434 - 491493 4.0 - Term 491484 - 491527 5.6 486 244 Tu 1 . - CDS 491541 - 492386 658 ## EF1599 transcriptional regulator Cro/CI family protein - Prom 492414 - 492473 5.1 + Prom 492386 - 492445 7.5 487 245 Tu 1 . + CDS 492468 - 492530 127 ## + Term 492541 - 492584 10.1 - Term 492642 - 492688 11.3 488 246 Op 1 9/0.000 - CDS 492695 - 494623 2153 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 489 246 Op 2 . - CDS 494640 - 496313 1478 ## COG0366 Glycosidases - Prom 496371 - 496430 8.0 + Prom 496365 - 496424 10.5 490 247 Op 1 5/0.023 + CDS 496544 - 498016 1003 ## COG1621 Beta-fructosidases (levanase/invertase) 491 247 Op 2 . + CDS 498035 - 499015 843 ## COG1609 Transcriptional regulators + Term 499020 - 499049 1.4 - Term 499008 - 499037 1.4 492 248 Tu 1 . - CDS 499075 - 499236 215 ## EF1605 hypothetical protein - Prom 499264 - 499323 4.8 - Term 499293 - 499334 2.1 493 249 Op 1 8/0.000 - CDS 499346 - 500755 1487 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 494 249 Op 2 . - CDS 500755 - 502635 1777 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 502796 - 502855 9.5 - Term 502858 - 502908 11.7 495 250 Tu 1 . - CDS 502918 - 504378 1333 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Prom 504503 - 504562 6.8 + Prom 504465 - 504524 4.7 496 251 Tu 1 . + CDS 504559 - 505110 601 ## COG4843 Uncharacterized protein conserved in bacteria - Term 505076 - 505126 10.6 497 252 Op 1 . - CDS 505169 - 506053 794 ## EF1610 hypothetical protein 498 252 Op 2 2/0.126 - CDS 506125 - 507051 1269 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase - Prom 507077 - 507136 7.5 - Term 507079 - 507142 12.2 499 253 Op 1 11/0.000 - CDS 507147 - 507911 678 ## COG1180 Pyruvate-formate lyase-activating enzyme - Term 507927 - 507961 2.0 500 253 Op 2 . - CDS 507988 - 510234 2444 ## COG1882 Pyruvate-formate lyase - Prom 510287 - 510346 9.7 - Term 510457 - 510502 14.6 501 253 Op 3 . - CDS 510524 - 511885 1403 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 511941 - 512000 80.4 502 254 Op 1 24/0.000 - CDS 512100 - 513098 1150 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 503 254 Op 2 2/0.126 - CDS 513111 - 515168 2536 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit - Prom 515292 - 515351 7.7 504 255 Op 1 . - CDS 515373 - 515801 525 ## COG1832 Predicted CoA-binding protein - Prom 515824 - 515883 8.0 505 255 Op 2 2/0.126 - CDS 515889 - 516332 551 ## COG4766 Ethanolamine utilization protein 506 255 Op 3 . - CDS 516345 - 517445 1704 ## COG3192 Ethanolamine utilization protein 507 255 Op 4 . - CDS 517458 - 517721 434 ## COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein 508 255 Op 5 . - CDS 517734 - 518333 502 ## EF1620 hypothetical protein 509 255 Op 6 . - CDS 518348 - 518974 692 ## COG4869 Propanediol utilization protein 510 255 Op 7 . - CDS 518987 - 519550 307 ## EF1622 hypothetical protein - Term 519560 - 519608 10.0 511 255 Op 8 2/0.126 - CDS 519618 - 519908 531 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein - Prom 519930 - 519989 5.4 - Term 519953 - 519994 -0.5 512 256 Op 1 2/0.126 - CDS 520032 - 521510 1624 ## COG1012 NAD-dependent aldehyde dehydrogenases 513 256 Op 2 4/0.046 - CDS 521501 - 522019 755 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 514 256 Op 3 6/0.023 - CDS 522033 - 522686 971 ## COG4816 Ethanolamine utilization protein 515 256 Op 4 8/0.000 - CDS 522700 - 523611 1228 ## COG4302 Ethanolamine ammonia-lyase, small subunit 516 256 Op 5 5/0.023 - CDS 523629 - 524993 1676 ## COG4303 Ethanolamine ammonia-lyase, large subunit 517 256 Op 6 2/0.126 - CDS 525011 - 526435 1527 ## COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition - Term 526456 - 526515 -0.7 518 256 Op 7 3/0.080 - CDS 526526 - 527959 1205 ## COG3920 Signal transduction histidine kinase 519 256 Op 8 . - CDS 527960 - 528532 709 ## COG3707 Response regulator with putative antiterminator output domain 520 256 Op 9 . - CDS 528560 - 528907 457 ## COG4810 Ethanolamine utilization protein - Prom 528927 - 528986 6.7 - Term 528930 - 528988 12.2 521 257 Tu 1 . - CDS 529067 - 530197 1098 ## COG1454 Alcohol dehydrogenase, class IV - Prom 530305 - 530364 9.7 - Term 530484 - 530522 -0.7 522 258 Op 1 . - CDS 530684 - 531265 749 ## COG2096 Uncharacterized conserved protein 523 258 Op 2 . - CDS 531262 - 531717 566 ## COG4917 Ethanolamine utilization protein 524 259 Op 1 35/0.000 - CDS 531847 - 532614 220 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 525 259 Op 2 33/0.000 - CDS 532611 - 533618 1122 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 526 259 Op 3 . - CDS 533611 - 534570 1238 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 534591 - 534650 3.7 + Prom 534920 - 534979 7.5 527 260 Tu 1 . + CDS 535123 - 535776 725 ## COG0344 Predicted membrane protein - Term 535743 - 535793 16.3 528 261 Op 1 . - CDS 535795 - 536670 1028 ## COG2017 Galactose mutarotase and related enzymes 529 261 Op 2 4/0.046 - CDS 536704 - 537486 885 ## COG4465 Pleiotropic transcriptional repressor 530 261 Op 3 24/0.000 - CDS 537507 - 538910 1348 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 531 261 Op 4 4/0.046 - CDS 538925 - 539473 811 ## COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit 532 261 Op 5 5/0.023 - CDS 539502 - 540401 956 ## COG4974 Site-specific recombinase XerD - Prom 540498 - 540557 8.0 - Term 540540 - 540591 4.1 533 262 Tu 1 . - CDS 540613 - 541920 1508 ## COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation - Prom 541940 - 541999 4.8 - Term 542098 - 542166 20.6 534 263 Op 1 . - CDS 542312 - 544222 1976 ## COG0550 Topoisomerase IA - Prom 544285 - 544344 5.0 535 263 Op 2 . - CDS 544407 - 545060 537 ## COG1266 Predicted metal-dependent membrane protease - Prom 545080 - 545139 2.1 536 264 Op 1 2/0.126 - CDS 545151 - 546014 804 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 537 264 Op 2 8/0.000 - CDS 546075 - 546842 1188 ## COG0164 Ribonuclease HII 538 264 Op 3 . - CDS 546844 - 547695 874 ## COG1161 Predicted GTPases - Prom 547899 - 547958 4.4 - Term 547845 - 547890 2.1 539 265 Tu 1 . - CDS 547971 - 548912 992 ## COG1893 Ketopantoate reductase - Prom 549006 - 549065 7.3 + Prom 548986 - 549045 10.2 540 266 Tu 1 . + CDS 549089 - 549979 825 ## COG0583 Transcriptional regulator 541 267 Tu 1 . - CDS 549988 - 551040 1267 ## COG3641 Predicted membrane protein, putative toxin regulator - Prom 551063 - 551122 3.8 - Term 551105 - 551153 7.3 542 268 Op 1 24/0.000 - CDS 551184 - 552482 1599 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 543 268 Op 2 . - CDS 552506 - 552748 318 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit - Prom 552791 - 552850 80.4 - Term 552758 - 552826 20.7 544 269 Op 1 28/0.000 - CDS 552966 - 553688 1108 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 545 269 Op 2 5/0.023 - CDS 553710 - 554696 1194 ## COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 546 269 Op 3 2/0.126 - CDS 554713 - 556122 832 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 547 269 Op 4 3/0.080 - CDS 556128 - 557210 1080 ## COG3426 Butyrate kinase 548 269 Op 5 . - CDS 557229 - 558050 745 ## COG0280 Phosphotransacetylase - Prom 558077 - 558136 8.7 + Prom 558089 - 558148 8.5 549 270 Tu 1 . + CDS 558333 - 559367 1026 ## COG1434 Uncharacterized conserved protein + Term 559373 - 559412 10.0 - Term 559361 - 559400 10.0 550 271 Op 1 . - CDS 559427 - 560149 586 ## EF1665 hypothetical protein - Prom 560175 - 560234 7.9 551 271 Op 2 . - CDS 560254 - 560952 502 ## EF1666 hypothetical protein - Prom 560974 - 561033 9.0 + Prom 560998 - 561057 4.3 552 272 Tu 1 . + CDS 561203 - 561997 876 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 562011 - 562059 13.3 + Prom 562040 - 562099 9.6 553 273 Op 1 3/0.080 + CDS 562126 - 562554 571 ## COG1846 Transcriptional regulators 554 273 Op 2 3/0.080 + CDS 562565 - 562720 252 ## COG0346 Lactoylglutathione lyase and related lyases + Term 562721 - 562778 23.4 + Prom 562722 - 562781 44.7 555 274 Op 1 7/0.000 + CDS 562822 - 563598 961 ## COG0346 Lactoylglutathione lyase and related lyases 556 274 Op 2 . + CDS 563611 - 564213 534 ## COG0400 Predicted esterase + Term 564221 - 564265 13.1 - Term 564208 - 564253 14.1 557 275 Op 1 1/0.287 - CDS 564293 - 564790 638 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 558 275 Op 2 . - CDS 564705 - 565241 436 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 565275 - 565334 8.9 559 276 Op 1 36/0.000 - CDS 565359 - 566642 1418 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 560 276 Op 2 . - CDS 566643 - 567323 288 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 567399 - 567458 3.4 - Term 567450 - 567510 11.2 561 277 Op 1 . - CDS 567516 - 568247 519 ## EF1674 hypothetical protein 562 277 Op 2 . - CDS 568249 - 568545 263 ## EF1675 ABC transporter, ATP-binding protein - Prom 568638 - 568697 80.3 563 278 Op 1 8/0.000 - CDS 568699 - 569226 511 ## COG1131 ABC-type multidrug transport system, ATPase component 564 278 Op 2 . - CDS 569223 - 569591 448 ## COG1725 Predicted transcriptional regulators - Prom 569625 - 569684 8.7 - Term 569657 - 569706 14.2 565 279 Tu 1 . - CDS 569740 - 570183 475 ## EF1677 putative lipoprotein - Prom 570203 - 570262 2.9 - Term 570248 - 570299 11.2 566 280 Op 1 . - CDS 570304 - 570858 543 ## COG0681 Signal peptidase I 567 280 Op 2 1/0.287 - CDS 570876 - 572309 1641 ## COG0793 Periplasmic protease - Prom 572345 - 572404 4.5 - Term 572362 - 572400 5.4 568 281 Op 1 2/0.126 - CDS 572406 - 572624 289 ## COG4479 Uncharacterized protein conserved in bacteria 569 281 Op 2 1/0.287 - CDS 572630 - 573145 624 ## COG0225 Peptide methionine sulfoxide reductase 570 281 Op 3 3/0.080 - CDS 573162 - 573806 691 ## COG4698 Uncharacterized protein conserved in bacteria 571 281 Op 4 2/0.126 - CDS 573808 - 574707 973 ## COG2755 Lysophospholipase L1 and related esterases - Term 574720 - 574760 4.4 572 282 Tu 1 . - CDS 574811 - 575653 1024 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 575722 - 575781 7.7 + Prom 575648 - 575707 4.8 573 283 Tu 1 . + CDS 575785 - 576438 718 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 576453 - 576491 9.5 + Prom 576535 - 576594 7.3 574 284 Tu 1 . + CDS 576632 - 576829 270 ## EF1686 hypothetical protein + Term 576893 - 576929 8.2 - Term 576871 - 576928 15.6 575 285 Op 1 7/0.000 - CDS 576935 - 577447 831 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 576 285 Op 2 3/0.080 - CDS 577450 - 579762 2225 ## COG0608 Single-stranded DNA-specific exonuclease - Prom 579838 - 579897 3.1 - Term 579831 - 579878 7.4 577 286 Op 1 . - CDS 579917 - 580384 669 ## COG5416 Uncharacterized integral membrane protein 578 286 Op 2 4/0.046 - CDS 580401 - 581189 894 ## COG0300 Short-chain dehydrogenases of various substrate specificities 579 286 Op 3 . - CDS 581190 - 582131 1026 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III - Prom 582158 - 582217 8.6 - Term 582297 - 582337 5.1 580 287 Tu 1 . - CDS 582346 - 582912 656 ## EF1692 hypothetical protein - Prom 582936 - 582995 6.6 - Term 582990 - 583022 2.4 581 288 Op 1 19/0.000 - CDS 583033 - 583278 400 ## COG1837 Predicted RNA-binding protein (contains KH domain) 582 288 Op 2 . - CDS 583290 - 583583 493 ## PROTEIN SUPPORTED gi|227518885|ref|ZP_03948934.1| ribosomal protein S16 - Prom 583604 - 583663 4.0 583 289 Tu 1 . - CDS 583712 - 584515 740 ## EF1695 acetyltransferase - Prom 584613 - 584672 8.2 + Prom 584501 - 584560 10.5 584 290 Op 1 . + CDS 584657 - 585211 794 ## COG0431 Predicted flavoprotein + Term 585225 - 585277 13.5 + Prom 585219 - 585278 9.9 585 290 Op 2 . + CDS 585332 - 586084 767 ## COG0789 Predicted transcriptional regulators + Term 586086 - 586144 18.0 - Term 586065 - 586134 19.1 586 291 Op 1 8/0.000 - CDS 586159 - 587577 1884 ## COG0541 Signal recognition particle GTPase 587 291 Op 2 . - CDS 587582 - 587920 448 ## COG2739 Uncharacterized protein conserved in bacteria - Prom 587943 - 588002 4.3 588 292 Tu 1 . - CDS 588004 - 588468 534 ## COG1683 Uncharacterized conserved protein + Prom 588446 - 588505 3.1 589 293 Op 1 40/0.000 + CDS 588631 - 589341 897 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 590 293 Op 2 . + CDS 589338 - 591101 1520 ## COG0642 Signal transduction histidine kinase + Term 591171 - 591239 31.3 591 294 Tu 1 . - CDS 591218 - 592072 1096 ## COG0226 ABC-type phosphate transport system, periplasmic component - Prom 592099 - 592158 9.3 592 295 Tu 1 . - CDS 592183 - 593361 1434 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 593439 - 593498 8.6 - Term 593470 - 593517 11.2 593 296 Op 1 5/0.023 - CDS 593523 - 596213 2922 ## COG0383 Alpha-mannosidase 594 296 Op 2 . - CDS 596225 - 597451 1373 ## COG3538 Uncharacterized conserved protein - Prom 597550 - 597609 9.7 + Prom 597584 - 597643 9.2 595 297 Tu 1 . + CDS 597672 - 598718 954 ## COG1609 Transcriptional regulators + Term 598847 - 598915 31.2 - Term 598770 - 598836 30.0 596 298 Op 1 . - CDS 598898 - 599830 887 ## COG0583 Transcriptional regulator 597 298 Op 2 . - CDS 599849 - 600547 590 ## COG3338 Carbonic anhydrase - Prom 600595 - 600654 5.2 - Term 600689 - 600740 -0.6 598 299 Op 1 9/0.000 - CDS 600745 - 601377 874 ## COG0461 Orotate phosphoribosyltransferase 599 299 Op 2 5/0.023 - CDS 601379 - 602092 835 ## COG0284 Orotidine-5'-phosphate decarboxylase 600 299 Op 3 13/0.000 - CDS 602082 - 603020 1012 ## COG0167 Dihydroorotate dehydrogenase 601 299 Op 4 3/0.080 - CDS 603017 - 603808 807 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases - Term 603861 - 603908 4.2 602 300 Op 1 24/0.000 - CDS 603916 - 607098 3525 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 603 300 Op 2 7/0.000 - CDS 607098 - 608177 1064 ## COG0505 Carbamoylphosphate synthase small subunit 604 300 Op 3 15/0.000 - CDS 608180 - 609463 1554 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 605 300 Op 4 6/0.023 - CDS 609472 - 610398 1044 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 606 300 Op 5 7/0.000 - CDS 610412 - 611692 1069 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 607 300 Op 6 4/0.046 - CDS 611709 - 612245 846 ## COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase - Term 612365 - 612406 7.1 608 301 Op 1 15/0.000 - CDS 612587 - 613492 350 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 609 301 Op 2 . - CDS 613479 - 613955 499 ## COG0597 Lipoprotein signal peptidase 610 301 Op 3 . - CDS 613961 - 614665 752 ## EF1724 CBS domain-containing protein - Prom 614697 - 614756 4.4 611 302 Tu 1 . - CDS 614770 - 616440 1940 ## COG2759 Formyltetrahydrofolate synthetase - Prom 616487 - 616546 6.3 + Prom 616528 - 616587 6.3 612 303 Tu 1 . + CDS 616619 - 616825 276 ## COG1278 Cold shock proteins + Term 616903 - 616957 9.2 613 304 Tu 1 . - CDS 616930 - 617391 277 ## EF1727 EbsA protein - Prom 617437 - 617496 6.2 + Prom 617325 - 617384 7.2 614 305 Tu 1 . + CDS 617492 - 617899 513 ## COG0328 Ribonuclease HI - Term 617833 - 617875 -0.7 615 306 Tu 1 . - CDS 617881 - 617964 61 ## 616 307 Op 1 . - CDS 618029 - 618523 622 ## COG2606 Uncharacterized conserved protein 617 307 Op 2 . - CDS 618541 - 619248 571 ## COG0710 3-dehydroquinate dehydratase - Prom 619335 - 619394 5.3 - Term 619374 - 619422 7.0 618 308 Op 1 35/0.000 - CDS 619458 - 621242 193 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 619 308 Op 2 . - CDS 621242 - 622993 209 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Prom 623093 - 623152 3.6 - Term 623114 - 623162 7.0 620 309 Tu 1 . - CDS 623191 - 623409 363 ## COG3763 Uncharacterized protein conserved in bacteria - Prom 623445 - 623504 8.0 - Term 623548 - 623593 7.2 621 310 Op 1 . - CDS 623603 - 624496 1253 ## COG0648 Endonuclease IV 622 310 Op 2 . - CDS 624507 - 624974 430 ## EF1737 hypothetical protein 623 310 Op 3 . - CDS 624974 - 625636 572 ## EF1738 hypothetical protein - Prom 625659 - 625718 6.1 624 311 Tu 1 . - CDS 625817 - 627079 727 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Prom 627203 - 627262 8.3 625 312 Tu 1 . + CDS 627291 - 629675 2473 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Term 629686 - 629726 8.4 - Term 629721 - 629768 13.5 626 313 Tu 1 . - CDS 629780 - 630781 1311 ## COG1609 Transcriptional regulators - Prom 630845 - 630904 5.8 + Prom 630746 - 630805 7.5 627 314 Tu 1 . + CDS 630996 - 632099 1405 ## COG0006 Xaa-Pro aminopeptidase + Term 632108 - 632165 17.2 - Term 632097 - 632149 17.4 628 315 Op 1 3/0.080 - CDS 632220 - 632807 1105 ## COG4980 Gas vesicle protein 629 315 Op 2 . - CDS 632823 - 633254 626 ## COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain - Prom 633285 - 633344 7.2 - Term 633373 - 633421 3.4 630 316 Op 1 3/0.080 - CDS 633432 - 634328 1354 ## COG1210 UDP-glucose pyrophosphorylase 631 316 Op 2 . - CDS 634340 - 635362 1404 ## COG0240 Glycerol-3-phosphate dehydrogenase 632 316 Op 3 10/0.000 - CDS 635431 - 636267 829 ## COG0682 Prolipoprotein diacylglyceryltransferase 633 316 Op 4 . - CDS 636282 - 637217 1013 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism - Prom 637304 - 637363 8.5 + Prom 637341 - 637400 6.3 634 317 Tu 1 . + CDS 637427 - 638389 823 ## COG0322 Nuclease subunit of the excinuclease complex - Term 638371 - 638419 11.1 635 318 Op 1 . - CDS 638425 - 638781 287 ## EF1751 hypothetical protein 636 318 Op 2 4/0.046 - CDS 638781 - 639104 449 ## COG1983 Putative stress-responsive transcriptional regulator - Term 639116 - 639171 8.5 637 318 Op 3 . - CDS 639179 - 640780 2198 ## COG3595 Uncharacterized conserved protein - Prom 640914 - 640973 4.7 - Term 640903 - 640940 -0.7 638 319 Op 1 32/0.000 - CDS 640990 - 641667 735 ## COG0704 Phosphate uptake regulator 639 319 Op 2 7/0.000 - CDS 641682 - 642458 284 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 640 319 Op 3 41/0.000 - CDS 642451 - 643260 306 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 641 319 Op 4 38/0.000 - CDS 643277 - 644161 1021 ## COG0581 ABC-type phosphate transport system, permease component 642 319 Op 5 39/0.000 - CDS 644161 - 645081 1053 ## COG0573 ABC-type phosphate transport system, permease component - Prom 645118 - 645177 4.3 643 319 Op 6 . - CDS 645204 - 646058 1118 ## COG0226 ABC-type phosphate transport system, periplasmic component - Prom 646117 - 646176 10.3 - Term 646184 - 646232 11.2 644 320 Op 1 28/0.000 - CDS 646234 - 647118 933 ## COG2177 Cell division protein 645 320 Op 2 4/0.046 - CDS 647111 - 647797 357 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 647828 - 647887 8.8 646 321 Op 1 . - CDS 647903 - 648886 989 ## COG1186 Protein chain release factor B 647 321 Op 2 . - CDS 648930 - 649004 64 ## - Term 649027 - 649068 6.4 648 322 Op 1 7/0.000 - CDS 649081 - 651618 3018 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 651689 - 651748 6.6 - Term 651820 - 651861 8.9 649 322 Op 2 6/0.023 - CDS 651874 - 652425 669 ## PROTEIN SUPPORTED gi|116333275|ref|YP_794802.1| ribosome-associated protein Y (PSrp-1) - Prom 652493 - 652552 4.5 - Term 652443 - 652488 3.1 650 323 Op 1 6/0.023 - CDS 652564 - 653199 325 ## COG1040 Predicted amidophosphoribosyltransferases 651 323 Op 2 . - CDS 653240 - 654556 629 ## COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) - Prom 654720 - 654779 7.1 + Prom 654527 - 654586 5.7 652 324 Tu 1 . + CDS 654828 - 655544 421 ## COG3910 Predicted ATPase - Term 655815 - 655864 13.3 653 325 Tu 1 . - CDS 655868 - 656203 455 ## COG1440 Phosphotransferase system cellobiose-specific component IIB - Prom 656254 - 656313 6.1 654 326 Tu 1 . - CDS 656324 - 656611 333 ## EF1770 hypothetical protein + Prom 656670 - 656729 10.4 655 327 Op 1 . + CDS 656753 - 657415 704 ## COG1739 Uncharacterized conserved protein 656 327 Op 2 . + CDS 657405 - 657638 428 ## EF1772 hypothetical protein + Prom 657644 - 657703 2.8 657 327 Op 3 1/0.287 + CDS 657723 - 658487 247 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Prom 658538 - 658597 2.0 658 328 Tu 1 . + CDS 658633 - 659136 431 ## COG4708 Predicted membrane protein 659 329 Op 1 . - CDS 659454 - 660188 457 ## EF1775 hypothetical protein 660 329 Op 2 . - CDS 660209 - 660538 319 ## EF1776 hypothetical protein - Prom 660574 - 660633 8.9 - Term 660605 - 660652 4.2 661 330 Op 1 17/0.000 - CDS 660667 - 661914 1416 ## COG0151 Phosphoribosylamine-glycine ligase 662 330 Op 2 . - CDS 661933 - 662082 203 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) - Prom 662179 - 662238 80.4 663 331 Op 1 10/0.000 - CDS 662354 - 663568 1338 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 664 331 Op 2 21/0.000 - CDS 663565 - 664137 320 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 665 331 Op 3 13/0.000 - CDS 664134 - 665165 764 ## PROTEIN SUPPORTED gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 666 331 Op 4 10/0.000 - CDS 665167 - 666606 1334 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 667 331 Op 5 . - CDS 666582 - 668057 1471 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain - Prom 668195 - 668254 80.3 668 332 Op 1 9/0.000 - CDS 668256 - 668858 610 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 669 332 Op 2 23/0.000 - CDS 668855 - 669529 544 ## COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 670 332 Op 3 15/0.000 - CDS 669530 - 669781 359 ## COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component 671 332 Op 4 1/0.287 - CDS 669795 - 670508 592 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase - Prom 670592 - 670651 9.2 - Term 670626 - 670654 -0.0 672 333 Op 1 29/0.000 - CDS 670660 - 671784 959 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 673 333 Op 2 . - CDS 671777 - 672265 513 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase - Prom 672294 - 672353 8.7 - Term 672375 - 672407 2.5 674 334 Tu 1 . - CDS 672438 - 673304 1113 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs - Prom 673327 - 673386 3.8 + Prom 673192 - 673251 8.4 675 335 Tu 1 . + CDS 673454 - 674329 333 ## PROTEIN SUPPORTED gi|90022317|ref|YP_528144.1| ribosomal protein S15 + Term 674382 - 674431 11.5 - Term 674361 - 674423 13.1 676 336 Op 1 . - CDS 674427 - 676067 1646 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 677 336 Op 2 . - CDS 676130 - 676450 415 ## EF1792 hypothetical protein - Prom 676479 - 676538 6.4 678 337 Tu 1 . - CDS 676584 - 677603 1060 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 677643 - 677702 6.5 679 338 Tu 1 . - CDS 677794 - 678246 708 ## COG4876 Uncharacterized protein conserved in bacteria - Prom 678272 - 678331 5.1 + Prom 678377 - 678436 6.3 680 339 Tu 1 . + CDS 678467 - 679036 671 ## EF1796 putative lipoprotein + Term 679062 - 679120 8.6 681 340 Tu 1 . - CDS 679083 - 679727 535 ## EF1797 hypothetical protein - Prom 679756 - 679815 10.8 - Term 679802 - 679840 6.2 682 341 Tu 1 . - CDS 679848 - 680999 931 ## COG0628 Predicted permease - Prom 681030 - 681089 4.6 - Term 681170 - 681224 13.2 683 342 Op 1 . - CDS 681240 - 684635 3874 ## EF1800 hypothetical protein 684 342 Op 2 . - CDS 684656 - 685213 462 ## EF1800 hypothetical protein - Prom 685246 - 685305 5.4 - Term 685258 - 685309 13.2 685 343 Op 1 4/0.046 - CDS 685363 - 685770 528 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 686 343 Op 2 13/0.000 - CDS 685790 - 686599 957 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 687 343 Op 3 13/0.000 - CDS 686586 - 687485 1254 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 688 343 Op 4 1/0.287 - CDS 687499 - 687978 538 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 689 343 Op 5 . - CDS 687975 - 689759 1760 ## COG1874 Beta-galactosidase 690 343 Op 6 3/0.080 - CDS 689822 - 690763 938 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 691 343 Op 7 . - CDS 690779 - 691810 1276 ## COG3684 Tagatose-1,6-bisphosphate aldolase 692 343 Op 8 7/0.000 - CDS 691797 - 692969 1348 ## COG2222 Predicted phosphosugar isomerases 693 343 Op 9 . - CDS 692981 - 693712 624 ## COG2188 Transcriptional regulators - Prom 693907 - 693966 9.4 - Term 693940 - 693995 17.1 694 344 Op 1 . - CDS 694034 - 694165 66 ## gi|315036698|gb|EFT48630.1| hypothetical protein HMPREF9501_00532 695 344 Op 2 5/0.023 - CDS 694098 - 695000 676 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 696 344 Op 3 . - CDS 694990 - 695835 810 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases - Prom 695929 - 695988 11.6 - Term 696219 - 696275 5.2 697 345 Op 1 . - CDS 696336 - 698396 1766 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 698 345 Op 2 9/0.000 - CDS 698438 - 699826 1054 ## COG0477 Permeases of the major facilitator superfamily - Prom 699945 - 700004 4.2 - Term 700114 - 700180 11.1 699 345 Op 3 . - CDS 700208 - 701062 711 ## COG0583 Transcriptional regulator - Prom 701171 - 701230 5.9 700 346 Tu 1 . + CDS 701454 - 702284 610 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I + Term 702382 - 702430 4.6 - Term 702364 - 702424 11.5 701 347 Op 1 . - CDS 702432 - 703286 881 ## COG3591 V8-like Glu-specific endopeptidase 702 347 Op 2 . - CDS 703335 - 704864 1493 ## COG3227 Zinc metalloprotease (elastase) - Prom 705070 - 705129 36.6 - Term 705079 - 705129 16.3 703 348 Op 1 . - CDS 705131 - 706429 825 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 704 348 Op 2 . - CDS 706426 - 707154 312 ## EF1821 agrBfs protein - Prom 707177 - 707236 4.8 705 348 Op 3 . - CDS 707243 - 707974 522 ## COG3279 Response regulator of the LytR/AlgR family - Prom 708024 - 708083 6.5 - Term 708237 - 708297 2.0 706 349 Op 1 . - CDS 708393 - 710351 1942 ## COG1705 Muramidase (flagellum-specific) 707 349 Op 2 . - CDS 710433 - 716033 5739 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases - Prom 716054 - 716113 3.9 708 350 Tu 1 . - CDS 716140 - 716223 62 ## - Prom 716358 - 716417 7.5 - Term 716505 - 716555 16.2 709 351 Op 1 . - CDS 716564 - 716950 218 ## EF1825 hypothetical protein 710 351 Op 2 . - CDS 717007 - 718023 1319 ## COG1064 Zn-dependent alcohol dehydrogenases - Prom 718061 - 718120 6.0 + Prom 718407 - 718466 2.1 711 352 Op 1 . + CDS 718538 - 719518 832 ## COG1641 Uncharacterized conserved protein 712 352 Op 2 . + CDS 719533 - 720243 810 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) - Term 720262 - 720318 4.4 713 353 Op 1 13/0.000 - CDS 720447 - 721289 969 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 714 353 Op 2 13/0.000 - CDS 721291 - 722142 752 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 715 353 Op 3 9/0.000 - CDS 722176 - 722673 559 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 716 353 Op 4 . - CDS 722688 - 723119 466 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 717 354 Tu 1 . + CDS 723700 - 723987 275 ## EF1833 hypothetical protein + Term 724031 - 724067 4.1 - Term 724168 - 724224 1.1 718 355 Op 1 4/0.046 - CDS 724233 - 724748 619 ## COG0698 Ribose 5-phosphate isomerase RpiB 719 355 Op 2 . - CDS 724774 - 725202 620 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 725370 - 725429 8.7 + Prom 725328 - 725387 10.6 720 356 Op 1 13/0.000 + CDS 725425 - 725919 415 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 721 356 Op 2 10/0.000 + CDS 725921 - 726223 433 ## COG3414 Phosphotransferase system, galactitol-specific IIB component + Prom 726227 - 726286 7.5 722 356 Op 3 . + CDS 726318 - 727721 1300 ## COG3775 Phosphotransferase system, galactitol-specific IIC component + Term 727735 - 727772 7.1 - Term 727721 - 727758 7.1 723 357 Tu 1 . - CDS 727762 - 728514 734 ## COG1349 Transcriptional regulators of sugar metabolism - Term 728762 - 728819 12.5 724 358 Op 1 . - CDS 728850 - 729695 819 ## LCAZH_1904 hypothetical protein 725 358 Op 2 . - CDS 729709 - 729840 79 ## - Prom 729861 - 729920 1.6 726 358 Op 3 . - CDS 729931 - 730509 453 ## COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism - Prom 730547 - 730606 8.9 + Prom 730631 - 730690 10.3 727 359 Tu 1 . + CDS 730937 - 731638 604 ## COG0726 Predicted xylanase/chitin deacetylase - Term 731698 - 731766 22.1 728 360 Op 1 . - CDS 731812 - 732228 358 ## EF1844 hypothetical protein 729 360 Op 2 . - CDS 732244 - 732327 135 ## - Prom 732406 - 732465 4.1 730 361 Op 1 . - CDS 732493 - 732660 110 ## gi|227519032|ref|ZP_03949081.1| hypothetical protein HMPREF0348_2015 731 361 Op 2 . - CDS 732584 - 732688 113 ## - Prom 732714 - 732773 11.3 - Term 733179 - 733221 11.9 732 362 Op 1 . - CDS 733386 - 734564 803 ## COG0582 Integrase - Prom 734605 - 734664 2.1 733 362 Op 2 . - CDS 734667 - 734978 159 ## EF1848 hypothetical protein - Prom 735115 - 735174 6.2 734 363 Op 1 . - CDS 735327 - 735572 58 ## EF1849 hypothetical protein 735 363 Op 2 . - CDS 735566 - 735967 369 ## EF1850 hypothetical protein - Prom 735990 - 736049 1.9 736 364 Tu 1 . - CDS 736535 - 738370 1346 ## COG1874 Beta-galactosidase - Prom 738463 - 738522 7.3 - Term 738438 - 738495 1.5 737 365 Tu 1 . - CDS 738542 - 739804 802 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 739837 - 739896 7.6 + Prom 739841 - 739900 12.7 738 366 Op 1 . + CDS 739942 - 740166 164 ## EF1853 hypothetical protein 739 366 Op 2 . + CDS 740163 - 740327 127 ## gi|227519041|ref|ZP_03949090.1| hypothetical protein HMPREF0348_2024 740 367 Tu 1 . - CDS 740421 - 741713 1178 ## COG3328 Transposase and inactivated derivatives - Prom 741828 - 741887 5.4 - Term 741738 - 741802 5.4 741 368 Tu 1 . - CDS 741986 - 742246 131 ## gi|227519043|ref|ZP_03949092.1| hypothetical protein HMPREF0348_2026 - Prom 742318 - 742377 9.6 Predicted protein(s) >gi|237663596|gb|GG668922.1| GENE 1 772 - 1032 288 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227518309|ref|ZP_03948358.1| ## NR: gi|227518309|ref|ZP_03948358.1| hypothetical protein HMPREF0348_1292 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_1292 [Enterococcus faecalis TX0104] hypothetical protein HMPREF9499_00336 [Enterococcus faecalis TX0012] # 1 86 1 86 86 147 100.0 2e-34 MTTMLAIIGTVVIITVQVIEYNMTEIHIPTAGTFNDDDAEPPHSSVTLVFIRTILITLSL NFPSHFFEMVFLCIRENNKQKRLLNH >gi|237663596|gb|GG668922.1| GENE 2 1327 - 2136 319 269 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 16 227 1 212 245 127 34 9e-28 MISLYLSNKTMENKELLSIKSVYKEFEIEGHSEHLKVLENIDLTVKTNEFLSIIGQSGTG KSTLLRSIAGLLRTTRGEITFEDKIINEPDANIGMVFQHFALFPWLTVEKNISFGLENRK EISREQINKRVSNLIEMIGLTGFEKAYPRELSGGMKQRVGFARALAIEPSLLLLDEPFSA LDIITASQLSNDLLEIWLNNQIATKSIVMITHDVQQAVQLSDRVVLMDANPGRIAKIYSI DIPRNQRSPKTTIDIVEQITEEMVRRIHL >gi|237663596|gb|GG668922.1| GENE 3 2195 - 3952 1156 585 aa, chain - ## HITS:1 COG:XF0411 KEGG:ns NR:ns ## COG: XF0411 COG4986 # Protein_GI_number: 15837013 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type anion transport system, duplicated permease component # Organism: Xylella fastidiosa 9a5c # 64 583 62 581 584 300 35.0 5e-81 MKAVTASSKKNTLLAKSIGNLTLLIILGIFIFIIVFSWLKMNRPLHTLPSEEFLATPSKT DDFLSPSNLFYFSIRTMFRMIVGMAWSFLFSFVFGILAVKYKTARRVILPLVNFLESVPL LGFLTFTTAWLLGLFPGNVMGAEAVAIFAIFTGQAWNIMLTLYQIMEVIPSDLVNVTDQF KYNAWEKFWRLEFVYSIPGLLWNVIISQTAAWFALVASEQASVAFPKETNLYLPGIGSYI QVALNRADFKSCLWAVFALLINVVILNFLVFQPLVRATYYFKYETDVESTTPPKSIIYHL LKKATLTKYFSKAFVKFSHFWIYDLPKVWYFFKLDYLYRLLAKLRHFFKTLWYVSLTIVG VYCSIKLYHFLPHQDFSMIPRLTLYTTLRVTLAMVVAGIIFTPLAIWVANDNRRLSIVQP IGQILGSIPSNVYTPFIVLIISMGFNKLEWWILPLIMVGCQWYFFFNVIAGYLAIPDDIR DVTKLFKLSKWQWWTKFLIPSILPYLITAIINAAGAAWNADIAAESIQWGKKSIDVTGLG QYIAANDGVKDKSALGTLAMCFVVGLCIVFVWQPLYRAAKQKFHY >gi|237663596|gb|GG668922.1| GENE 4 4497 - 5009 410 170 aa, chain + ## HITS:1 COG:no KEGG:EF1055 NR:ns ## KEGG: EF1055 # Name: not_defined # Def: tunicamycin resistance protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 170 1 170 170 329 98.0 2e-89 MIIWLNGAFGAGKTTIAHELQQKLPNAIIYDPEIIGSALMELVPEEMKENDFQEYQEWRC WNAHLLKRMSKESGRPIIVPMTLYKKEYEEELIGYLRRAGIDVYHFLLAVEKEEILQRLL KRNDGTFEWGKNKLPEVLEGFRQIQFTEIFRNHSADTTEIVASILNRITE >gi|237663596|gb|GG668922.1| GENE 5 5278 - 6876 1404 532 aa, chain + ## HITS:1 COG:L91569 KEGG:ns NR:ns ## COG: L91569 COG1914 # Protein_GI_number: 15673064 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Lactococcus lactis # 3 310 2 306 314 447 77.0 1e-125 MKNSEEHEPKQRHHLIEYANGPSLEEINGTIDVPKNMSFWKTLFAYSGPGALVAVGYMDP GNWSTSITGGQNFQYLLMSIILISSLIAMLLQYMAAKLGIVSQMDLAQAIRARTSKTLGI VLWILTELAIMATDIAEVIGGAIALYLLFHIPLGLAVFITVFDVLLLLLLTKIGFRKIEA IVVALIVVIFVIFAYQVALSNPVWGDVIKGLVPSAEAFSTSHAVNGQTPLTGALGIIGAT VMPHNLYLHSSVVQSRKIDRKDKADIQRALRFSTWDSNIQLTMAFFVNSLLLIMGVAVFK SGSVKDPSFFGLFDALSNPAVMSNSILAHIAGSGILSILFAVALLASGQNSTITGTLTGQ IIMEGFIHMRVPIWLRRMVTRLLSVIPVLICVLMTSGKSTVEEHIAINNLMNNSQVFLAF ALPFSMLPLLMFTDSRVEMGKHFKNSWLIKLLGWVSVIGLIYLNMKGLPDQIEGFFGDNP TASQITLADNIAYVIIALVILLLVWTVVELYKGDKRYAQQLAAMEQQVEEVK >gi|237663596|gb|GG668922.1| GENE 6 6876 - 7301 611 141 aa, chain + ## HITS:1 COG:L103195 KEGG:ns NR:ns ## COG: L103195 COG0589 # Protein_GI_number: 15674218 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Lactococcus lactis # 2 141 4 144 145 64 26.0 5e-11 MKFSKIMVGVEESPDALKAFHYAIQKAKEEQAELVIVSILEEKEINVYQSLDKNYWQEQL AKLEKQTEKYQQEALANGIDKVSVIVNEGNPGELIINKLIPLNKPDLLIIGSKSTSKLKS FFGSQAAYMARYAPISVMIIR >gi|237663596|gb|GG668922.1| GENE 7 7356 - 9026 1441 556 aa, chain - ## HITS:1 COG:BS_yunI KEGG:ns NR:ns ## COG: BS_yunI COG2508 # Protein_GI_number: 16080295 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Bacillus subtilis # 2 552 1 528 531 150 23.0 6e-36 MMTVNDLLHAEELPGLTLLTHETNLDAPILQANILENPDAFDWLTPGEILLTTGYIFKDQ PCLQKRLIQELANMNCAALGFKVQRYFNEVPQEMIQLANDVGLPILSIPYNYNFSQIISL VNRRVNQPDETISQHSVHMHNKFYTIIKAGGKSTQLLEVLSAAIQAPVMLLDERFQIMNH FDLPDAPTRITSILNNATLKKQFETALKAQNNELLLFYKEPLTVEFSLANHQLSLRILPI KKKNLSLSYLVIWQTTKKLQTIDLLSVEVCAHYLLPQLQLESSENLTTRQKIGALFQDLI QEKNTNPQAWQEFSNYLQLNEKDTFSLLLVAIEQLEQLFNPTIQMNSIGHQLNHILEGYR QKITAFPTQTGFILLLENPAQEEATYLAQTTHLAKNLLEQLMKLNPKLSFKLAIGPTVKK ITDLCDSYKLAQETFHLAQASQELQQRTILNYDDLFFYRLMIETLTKQAKQKIYQRLIEP LEKEDQKHESSLLETINTYFQSNKNISLTATNMYVHRNTIIYRLKKIEEILHLTLEFPDS SLQLSLAVYLYKQKLL >gi|237663596|gb|GG668922.1| GENE 8 9407 - 11068 1742 553 aa, chain + ## HITS:1 COG:lin2300 KEGG:ns NR:ns ## COG: lin2300 COG4166 # Protein_GI_number: 16801364 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Listeria innocua # 18 552 22 557 559 402 39.0 1e-112 MKKLKMLGCVGLLLALTACQAGTGNSADSNKAAEQKIAISSEAAISTMEPHTAGDTTSTL VMNQVYEGLYVLGKEDELELGVAAEEPAISEDETVYTFKIREDAKWSNDDPVTANDFVYA WQQVASPKSGSIHQALFFDVIKNAKEIALEGADVNTLGVKALDDKTLEITLERPTPYLKS LLSFPVLFPQNEKYIKEQGDKYATDAEHLIYNGPFKLKEWDNASSDDWTYEKNDTYWDAE KVKLTEAKVSVIKSPTTAVNLFDSNELDVVNKLSGEFIPGYVDNPAFLSIPQFVTYFLKM NSVRDGKENPALANNNIRKALAQAFDKESFVKEVLQDQSTATDQVIPPGQTIAPDGTDFT KLAAKKNNYLTYDTAKAKEFWEKGKKEIGLDKIKLEFLTDDTDSAKKAAEFFQFQLEENL DGLEVNVTQVPFTIRVDRDQTRDYDLELSGWGTDYRDPLTVMRIFTSDSTLGGVTFKSDT YDQLIQETRTTHAADQEARLNDFAQAQDILVNQETVLAPIYNRSISVLANQKIKDLYWHS FGPTYSLKWAYVN >gi|237663596|gb|GG668922.1| GENE 9 11096 - 12319 1088 407 aa, chain + ## HITS:1 COG:yahJ KEGG:ns NR:ns ## COG: yahJ COG0402 # Protein_GI_number: 16128309 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli K12 # 3 398 56 454 460 289 39.0 6e-78 MLLKNCKLETGFSTVNQRIVATETASYDIRIENEVCTAVAPQLRPLESETVIDVNQQLVL PALREMHIHIDKTYFGGPWKACRPLTKGILTRIEEETWLLPEQLPTSLERACQVIEQYIQ QGHYHIRSHCNVDPSIGTKHIEITKEAFSRYEQYVTHEIVAFPQHGLLRSQVEPLMREAL RMGATHVGGVDPALVDRHVDHSIAKIFELATTFNKKIDVHLHARDTLGLYEFNKFVDYTE QAKMFGEVTLSHALALGGLEEAAIRDIAQKFIETGIDLTSTVPIGMPTMPIPTLVEQGVK ISVAHDSLTDHWSPFGSGNTIEKLNTAAQRFKISDEYRLNRLWGLASNFVTPLDPNGQRV WPNVGDSADFLLFNAESTAHVIARQQPIQQLILKGQLVEAVQKGERE >gi|237663596|gb|GG668922.1| GENE 10 12316 - 13533 1256 405 aa, chain + ## HITS:1 COG:yahJ KEGG:ns NR:ns ## COG: yahJ COG0402 # Protein_GI_number: 16128309 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli K12 # 7 405 55 454 460 231 34.0 3e-60 MTASIVYLNNVRLETGFAKDHHELTYTKTARYTLAIQEGKIQAIIPQNQVTEKQQGTDLN GQLAIPAFQESHNHLDKTYLSLGWRASQPVKNLKERLADEASELKLLAPSTEQRATAMIE KLIGYGASYIRTHVNIDPYVELENFWGVKRALEKYAHVIDYDIVVFPQHGLLKNPHTVLL MREALKNGGTMVGGLDPAGIDYAIEESLETIFDLAEEFQVGIDIHLHDTGEVGVYTIDKF LDILEERKFTQRTAISHAFALLDVRPAEKEKLYQRLATHQTAIMSTIPYDPRYLLPPIDV LRQAGVSVHLGSDGFFDSWSSNVSGDLFEKLRNFCEMTGKITEEQLTQAYVHGCGKEAPF SFEEERLWFTEGDEANFIFTEAASTAEVIARKPQKRQIMLKGQWV >gi|237663596|gb|GG668922.1| GENE 11 13768 - 14247 463 159 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 [Streptococcus pneumoniae R6] # 6 157 3 154 165 182 59 2e-44 MTEQTRENKKAAYELCLQQLSGLLEIETDAIANLANSSALLAQTLPDTVFAGYYLYKDEE LVLGPFQGKVSCTRIKMGKGVCGESAEKQATLIVDNVKTHANYISCDSAAMSEIVVPMVK NHQLVGVLDIDSGVTNSYDAVDQLYLEKFVTLLLEKSDF >gi|237663596|gb|GG668922.1| GENE 12 14323 - 14745 445 140 aa, chain + ## HITS:1 COG:lin1207 KEGG:ns NR:ns ## COG: lin1207 COG2764 # Protein_GI_number: 16800276 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 2 135 3 133 135 142 50.0 2e-34 MLELYINFKGEAKEAIAFYEDVFDTKCQNLMTFGEAPEDPEHPINDEIKDLVMNASIIIE GTYVMISDVPDMFGFEVTEGNNLSLVVSTDDDEKIDRLFKRLSEGGTVTMPLSETFWSKK YGSLKDQFGIHWMFNYYEED >gi|237663596|gb|GG668922.1| GENE 13 15024 - 15662 626 212 aa, chain - ## HITS:1 COG:L1734467 KEGG:ns NR:ns ## COG: L1734467 COG0110 # Protein_GI_number: 15673662 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Lactococcus lactis # 1 195 1 193 203 212 50.0 4e-55 MKQNDFDYMQMLKGELYYAPTILPENKSTKGKVLAQKINQLPIDNVKEIVALEKELLGKT GNELYINPPLHVDYGRHIEVGENFYANMDCIFLDVNKIIFGDNVMVGPRASFYTAGHPID PTIRTAELEFGTPIIVEDNVWIGGSATILPGVTIGKNAIVAASAVVTKDVPANTIVGGNP AKVIRKIDENDQQFWTEKQRQYQIAKKQFFHE >gi|237663596|gb|GG668922.1| GENE 14 15783 - 15929 236 48 aa, chain - ## HITS:1 COG:no KEGG:EF1067 NR:ns ## KEGG: EF1067 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 48 20 67 67 91 100.0 1e-17 MYAIKFFHGYLTADGKRTRDKSGCLVYHSEKEAQKLADKIGGRVKKIG >gi|237663596|gb|GG668922.1| GENE 15 16060 - 17097 471 345 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 9 344 14 343 345 186 33 2e-45 MTISTESFGQGMLLYTLTNKNGVTLKATDFGARIVALDVPLTKNESRSLVLGFPSADEYL SKDLYFGATIGRTAGRIADGSFELAGKTYQTMINTPTQTTLHGGTPGFESKKWHSEIQEA QVNPSVKFWLESPAGENGFPGNLTVSVTYTLTEENEWQIEYQATTDEQTLFNPTNHVYFN LTGNPAIPIDAHELQINAQKYVPLDERVLPLGELASVDQTAFDLQKPKKLAEIFSSNDEQ IQKMNGFDHPFILTNHDLINPDVILKSPTKDITLEMFTDQPSVVIFSANFADNGPDIQGQ KLVNHGALTFETQVCPGAERFPLFGSITLSPEQEFHSTTRFKLIY >gi|237663596|gb|GG668922.1| GENE 16 17317 - 18480 1305 387 aa, chain + ## HITS:1 COG:SP1853 KEGG:ns NR:ns ## COG: SP1853 COG0153 # Protein_GI_number: 15901681 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Streptococcus pneumoniae TIGR4 # 3 386 8 391 392 459 61.0 1e-129 MEELLMNRFVEIFGEKGTACYFAPGRINLIGEHTDYNGGHVFPAAITLGTFGVARKRDDQ KIRMFSDNFKEVGLIEFSLEDLTYSDSDDWANYPKGVLNYLIESGHNIDSGLDVLFYGTI PNGAGLSSSASIELLMGTICNDLYALHCPMLELVQIGKKVENEFIGVNSGIMDQFAVGMG EKDQAILLDTNNMHYEMVPAKLGEYTIVIMNTNKRRELADSKYNERRAECEEAVRLLQKE LSIEFLGELDSETFEQYQALIGDPTLIKRARHAVTENERTLLAKQALTEGDLEEFGLLLN ASHRSLKEDYEVTGIELDTLVACAQEQPGVLGARMTGAGFGGCSIALVPKQNIDAFIEAV GQSYQDKIGYAADFYPASIDDGARKLF >gi|237663596|gb|GG668922.1| GENE 17 19499 - 20992 1406 497 aa, chain + ## HITS:1 COG:SP1829 KEGG:ns NR:ns ## COG: SP1829 COG4468 # Protein_GI_number: 15901658 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose-1-phosphate uridyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 9 494 5 488 491 534 54.0 1e-151 MMKESSKWIAAFVEIIIENGDWTETDRYYLTNRIAKLVGCDFFEQPEAVACEQEPLRVVE HLLNIAQANHQIDDSITEAEQLEAELMDFITPTPTIINRKFMDYYQESPRKATDYFYQLC KTNNYIKTKAIAKNIIFPMDSPYGKLEITINLSKPEKDARKILAEKKMSQKKYPACMLCM ENEGYYGRVNYPARTNHRIIRLNLEDEAWGFQYSPYAYYNEHAIFLDQQHREMKIEKKTF QRLLKITELFPEYFVGSNADLPIVGGSILSHDHYQAGRHTFPMDLAPMETRFSLKKYPEI TAGILKWPMSVIRLQSDHQEELVEAAELILTKWRNYSDERVSVRAYSEDGTPHHTITPIA RRKGSLFELDLVLRDNNVSEEFPDGIFHPHPEVQHIKQENIGLIEVMGLAILPPRLAQEL REVEKYLLKQPNQIAESHRAWADELSQQTITEANVKEVIQQGIGTIFVQILTDAGVFKRD EEGRRAFERFIQCIEND >gi|237663596|gb|GG668922.1| GENE 18 20999 - 22003 891 334 aa, chain + ## HITS:1 COG:SP1854 KEGG:ns NR:ns ## COG: SP1854 COG1609 # Protein_GI_number: 15901682 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 4 329 1 331 335 242 40.0 6e-64 MRNIVTIKDIAEQVGVSSATVSRVLNYDETLSVSDETKKKIFETAETLNYKKRARKKQAG KKKIRFVQWFSDPEELDDIYYLSIRLGVEKRAEELGFLLVKESLTNLSQKRFDGTIALGK FDEKQVADLAALGAPLLFVDFDAMAFDQNSIVVDFTGSVKTIVQEFLAQGHQKIGMLSGQ EYTKESRVALVDPRFVAFKETLKDLDLYHQEWVVEAAFSVEEGYQAMKDFIEKADTRPTA FFAASDTLAIGAMRALQEAAIRVPEDISIIGFNDISVAKYVSPTLTTVKVHTEWMGELAV ETMKELCLNTPPVPRKIIVGTEFIQRDSTKHSSK >gi|237663596|gb|GG668922.1| GENE 19 22085 - 22249 217 54 aa, chain + ## HITS:1 COG:no KEGG:EF1073 NR:ns ## KEGG: EF1073 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 50 1 50 164 99 100.0 6e-20 MQPKLIILRGNSGSGKTTIANALHQCLKEQSLLISQDVVRREMLRVKDETVFWT >gi|237663596|gb|GG668922.1| GENE 20 22435 - 22716 131 93 aa, chain + ## HITS:1 COG:no KEGG:EF1073 NR:ns ## KEGG: EF1073 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 93 72 164 164 160 93.0 2e-38 MIVEGIFQKAIYHSFFQEILPLFEGNVQVYYFDISFEETLKRHSQRNKNQEFGVVEMKRW WLPEDYLELAGEQRLSEQLSEKQIIRQILADIQ >gi|237663596|gb|GG668922.1| GENE 21 22780 - 23052 358 90 aa, chain + ## HITS:1 COG:no KEGG:EF1074 NR:ns ## KEGG: EF1074 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 90 1 90 90 176 97.0 4e-43 MDYQERLKNLPPEVMTAFSESFIFLISNDKVQHFPARDLTQAEMIQRVKEKLGEAVTWSL WQGFVIAVNSEKTCVAVLPKYHQLDGFENE >gi|237663596|gb|GG668922.1| GENE 22 23115 - 23621 632 168 aa, chain + ## HITS:1 COG:no KEGG:EF1075 NR:ns ## KEGG: EF1075 # Name: not_defined # Def: acetyltransferase # Organism: E.faecalis # Pathway: not_defined # 1 168 1 168 168 326 98.0 2e-88 MSELVVIREMQEKDILALDTQFVQQGWPSRQEILMNYLEEQLVKQRTVFVAEKKATLLGY VTLLPLAKEGPFKNLYPEIADFNVFLPFQKQGVGRLLLSRAENVAKSYADTVSLGVGLHP GYGAAQRLYIKQGYVPDGSGVWFQNKQLKPNDRCVNDDELVLYLSKKL >gi|237663596|gb|GG668922.1| GENE 23 23670 - 24110 485 146 aa, chain + ## HITS:1 COG:SP1023 KEGG:ns NR:ns ## COG: SP1023 COG0454 # Protein_GI_number: 15900894 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 142 1 141 143 124 45.0 4e-29 MIRKMKPTDAAVLTIINKEQLGYEVPVDVTCKQIEKLLLASDREFLYVYEETKTGKILGY VHAQLYETIYSQTLLNVLGLAVAKEAEGRGIGKQLMTKLETEAKKYNLSAIRLNSGEQRT AAHQFYEHIGYVSDKKQKRFIKYLDT >gi|237663596|gb|GG668922.1| GENE 24 24303 - 25457 1251 384 aa, chain + ## HITS:1 COG:L125116 KEGG:ns NR:ns ## COG: L125116 COG0477 # Protein_GI_number: 15672105 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 1 381 1 381 387 501 81.0 1e-142 MTKKNSMMYLAISNLFLVFLGVGLVIPVIPQLKEEMHFSGTTMGMMISIFAIAQLITSPI AGVLSDKIGRKKMIATGMLVFSISELLFGLAQAKSGFYISRGLGGIAAALLMPSVTAFVA DMTTISERPKAMGLVSAAISGGFIIGPGVGGFIAYLGIRAPFFAAAFLAFIGFILTLTVL KEPEKRILAAVEAKKGSFMDILRNPMFTLLFVIILISSFGLQAFESIYSIMATINFGFTT SEIAIVITVSGILALICQLFFFDAIVQKIGEMGLIQLTFFASAIFIAVIAFTKNNLVVVF STFIVFLSFDLFRPAVTTYLSKHAGDQQGTINGLNSTFTSFGNILGPMAAGALFDINHFF PYYVSAVILLGTGFLSLFLNRNKM >gi|237663596|gb|GG668922.1| GENE 25 25570 - 25671 129 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLVVLIAVSRIVCYAFPDYFDVRATHTQTWKG >gi|237663596|gb|GG668922.1| GENE 26 25704 - 25988 108 94 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLLKYISSFIWMLCSLGIIYAILRMITSVSKTDFSGNGTKIYLILIVLYTLGTIGLGML VSKKWFYFLIIFISLCVLSPIILILILNYTNLLK >gi|237663596|gb|GG668922.1| GENE 27 26228 - 27544 1322 438 aa, chain + ## HITS:1 COG:pli0067 KEGG:ns NR:ns ## COG: pli0067 COG0389 # Protein_GI_number: 18450349 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Listeria innocua # 4 431 6 426 426 388 47.0 1e-108 MKFDYEKEPSRDILCIDCKSFYASVECAERGLDPLKTMLVVMSNAENAGGLVLSASPMAK KVLGVSNVTRKNQVPAHPDLYVVPPRMNLYMKKNQEINNLYKKFVADEDHSVFSVDESFL DVTASLSYFHCETAYKMARIIQRVVYNHVGIYVTVGIGDNPLLAKLALDNGAKHSPDFIA EWRYDRVPDTVWQLPSLTDFCGIGRRMAKRLNRLGIDSVYELAQANPHLLQETFGVMGLQ LYAHSWGIDRTFLGKKAQHKAEKSFGNSQILPRDYARRDQIELVLKELTEQVAARLRKAH CQTECITVYVGYSKGQIDREGRTGWRKQQTIPATNNTKVLITYVLALFREHYLAGTDVRQ LGLSYGKLVWNESLQLDLFSEPEEQISEMELNYLIDKIRQKFGFQALIHASSLLEGATAI HRSGLVGGHAGGNVGLGG >gi|237663596|gb|GG668922.1| GENE 28 27549 - 27938 507 129 aa, chain + ## HITS:1 COG:no KEGG:EF1081 NR:ns ## KEGG: EF1081 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 129 1 129 129 230 96.0 1e-59 MKRTKKEFTPYNEYHDRPFELKWATAFALGELQEGIEASDEYSKRAFERLPQQTTEEIEE YLEQSLKNNQVLEIQLNTLDDYGRVQPPIVGVFEGMSSMEYAKVGNTHILFEDIRHIKSH EFTKWSSLD >gi|237663596|gb|GG668922.1| GENE 29 28025 - 28207 282 60 aa, chain + ## HITS:1 COG:no KEGG:EF1082 NR:ns ## KEGG: EF1082 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 60 1 60 60 82 98.0 8e-15 MGHHLKGHHGKKTNANGGFLTKLLAGGALVGVGKKLYDNREKIKELLSDDKEKSNDTENK >gi|237663596|gb|GG668922.1| GENE 30 28225 - 28530 380 101 aa, chain + ## HITS:1 COG:no KEGG:EF1083 NR:ns ## KEGG: EF1083 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 101 1 101 101 156 98.0 3e-37 MVKDAAYIIEEITTILEGTYFVITKKANKRRMCLHVSDTAKEFLRCQREYETFLEQQFDY ATMFLETCTEDVSVEIQTGLLEETNYQALTVEKLQQIATKM >gi|237663596|gb|GG668922.1| GENE 31 28583 - 29014 453 143 aa, chain + ## HITS:1 COG:BH3184 KEGG:ns NR:ns ## COG: BH3184 COG0589 # Protein_GI_number: 15615746 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Bacillus halodurans # 3 143 1 141 147 102 38.0 3e-22 MSVYQHILVALDGSDQSEKAFHEAVRIAKEEQATLYLATIINDAEFTTSPFSFEELYDLE KHKSEEMLTEKAKQASEIGVKTVKKIVELGSPKRYLANTISENYAIDLIVIGATGRGAIQ RTLIGSTTDYVVNHALCNVLVVR >gi|237663596|gb|GG668922.1| GENE 32 29085 - 29327 262 80 aa, chain + ## HITS:1 COG:no KEGG:EF1085 NR:ns ## KEGG: EF1085 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 80 1 80 80 107 100.0 2e-22 MKTKIGKTVILSAFLFTSFLLLSGCTSAGEEMEKTIDRQKEKVDKTVDKQKHKNENSMES YDEKVDRSLDSQEDKIDTTE >gi|237663596|gb|GG668922.1| GENE 33 29697 - 30143 453 148 aa, chain + ## HITS:1 COG:BS_bltD KEGG:ns NR:ns ## COG: BS_bltD COG0454 # Protein_GI_number: 16079713 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Bacillus subtilis # 1 141 1 148 152 124 43.0 5e-29 MKIHFEKVTSNNRKAVENLQVFAEQQIFIESMAENLKESDQFPEWESAGIYDGNKLIGYA MYGRWQDGRVWLDRFLIDQRFQGQGYGKAACRLLMLMLIEKYQTNKLYLSVYDTNSSAIR LYQQLGFVFNGELDTNGERVMEWTHQNK >gi|237663596|gb|GG668922.1| GENE 34 30082 - 30348 123 88 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHAVRHWKTKTTNNIMEKFYFHPYPPVTLFSKQIELNLPFYLLKVNKWSQLKEKGETKCA MAFVSPVLSTYSDVSIPLPAHHSYLIHH >gi|237663596|gb|GG668922.1| GENE 35 30283 - 30996 695 237 aa, chain + ## HITS:1 COG:SSO1074 KEGG:ns NR:ns ## COG: SSO1074 COG2761 # Protein_GI_number: 15897941 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis # Organism: Sulfolobus solfataricus # 1 206 3 208 225 91 29.0 1e-18 MKIEFFHDVICSFCFPMSDRMHEIQQEFPEIELIHRSFALGWSANDFETMFGSRAAVKEE VLTHWVHANQNDSKHRFNIEGMRKQRFDFPTSKNALLAAKAAGYIGNQDTYWLLFDKLQE GLFMRSLNIEEPEVIEELVKETTIDFALWKEAVASEAVWTAVQEDFALASAYGLQGVPAL IINQKYLINGAVPKQKISQTIQKILAEEKQQQPLVSLTPSSEESASCEFKEGTWTCH >gi|237663596|gb|GG668922.1| GENE 36 31067 - 31462 319 131 aa, chain + ## HITS:1 COG:no KEGG:EF1089 NR:ns ## KEGG: EF1089 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 131 1 131 131 225 100.0 4e-58 MFNAYREYWNNITTMNASATRAQYWWPQLINYLVLGIYSAITGVYRYIEVTPNDGTIIKE WNTVTIIFFLLTALIWLANFTVRARRLHDRDHSNWWILFYLLPFIGTLVIFITLILPSKS HTRWPVNQSEI >gi|237663596|gb|GG668922.1| GENE 37 31648 - 33069 1230 473 aa, chain - ## HITS:1 COG:no KEGG:EF1090 NR:ns ## KEGG: EF1090 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 473 1 473 473 851 99.0 0 MIRFLEKNYRKMEEIIRVLSISDKWMTKKELAKYIGSSESTFIRYIEEIKQRWGESLTIK TSHKLGYRLENFNASLYLNVLTDMAKTSTTTQLLHEFIQNPGKTIEYYCDTINISRSSFA RKLKQCNQVLETYSLRVIVDQGYQLTSQTEELPLRIFTTFFFLMYYGHYELPYQLDKQEI KQLMRRNQCQLNIISMDNSYEHDFFIMYFIVDLLREHQGFQQRFQKKTDKKSPIKMEDYL LLSRHFTGLSRETYREVLRYFQRGAFQQYYSEDQEVISQRIRENLKFNAFSQIEQLTEEV VDFAVHLLTCLYLFSQLVPFDTSELTQRATFFTRQIHFTQLHLYARLKAELHFFSALLET NLLNYSSSYIFWLLNTFPEINQSFDSKKILIISDMGLNHSQYIGNYVHDILALHRIRSNT LAITEEQLGDHQLEEFDLIITNQPIIETSVPSILINDAILFSNKRELLDLLNF >gi|237663596|gb|GG668922.1| GENE 38 33397 - 36708 3139 1103 aa, chain + ## HITS:1 COG:BH0361 KEGG:ns NR:ns ## COG: BH0361 COG4932 # Protein_GI_number: 15612924 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Bacillus halodurans # 743 1033 1087 1356 1661 72 29.0 4e-12 MITDENDKTNINIELNLLNQTEQPLQREIQLKNAQFMDTAVIEKDGYSYQVTNGTLYLTL DAQVKKPVQLSLAVEQSSLQTAQPPKLLYENNEYDVSVTSEKITVEDSAKESTEPEKITV PENTKETNKNDSAPENTEQPTATEEVTNPFAEARMAPATLRANLALPLIAPQYTTDNSGT YPTANWQPTGNQNVLNHQGNKDGGTQWDGQTSWNGDPTNRTNSYIEYGGTGDQADYAIRK YARETTTPGLFDVYLNVRGNVQKEITPLDLVLVVDWSGSMNENNRIGEVQKGVNRFVDTL ADSGITNNINMGYVGYSSDSYNNNAIQMGPFDTVKNPIKNITPSSTRGGTFTQKALRDAG DMLATPNGHKKVIVLLTDGVPTFSYKVSRVQTEADGRFYGTQFTNRQDQPGSTSYISGSY NAPDQNNINKRINSTFIATIGEAMALKQRGIEIHGLGIQLQSDPRANLSKQQVEDKMREM VSADENGDLYYESADYAPDISDYLAKKAVQISGTVVNGKVVDPIAEPFKYEPNTLSMKSV GPVQVQTLPEVSLTGATINSNEIYLGKGQEIQIHYQVRIQTESENFKPDFWYQMNGRTTF QPLATAHEKVDFGVPSGKAPGVKLNVKKIWEEYDQDPTSRPDNVIYEISRKQVTDTANWQ TGYIKLSKPENDTSNSWERKNVTQLSKTADESYQEVLGLPQYNNQGQAFNYQTTRELAVP GYSQEKIDDTTWKNTKQFKPLDLKVIKNSSSGEKNLVGAVFELSGKNVQTTLVDNKDGSY SLPKDVRLQKGERYTLTEVKAPAGHELGKKTTWQIEVSEQGKVSIDGQEVTTTNQVIPLE IENKFSSLPIRIRKYTMQNGKQVNLAEATFALQRKNAQGSYQTVATQKTDTAGLSYFKIS EPGEYRMVEQAGPLGYDTLAGNYEFTVDKYGKIHYAGKNIEENAPEWTLTHQNHLKPFDL TVHKKADNQTPLKGAKFRLTGPDTDIELPKDGKETDTFVFENLKPGKYVLTETFTPEGYQ GLKEPIELIIREDGSVTIDGEKVADVLISGEKNNQITLDVTNQAKVPLPETGGIGRLWFY LIAISTFVIAGVYLFIRRPEGSV >gi|237663596|gb|GG668922.1| GENE 39 36712 - 38142 1431 476 aa, chain + ## HITS:1 COG:no KEGG:EF1092 NR:ns ## KEGG: EF1092 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 476 1 476 476 865 99.0 0 MKNARWLSICVMLLALFGFSQQALAEASQASVQVTLHKLLFPDGQLPEQQQNTGEEGTLL QNYRGLNDVTYQVYDVTDPFYQLRSEGKTVQEAQRQLAETGATNRKPIAEDKTQTINGED GVVSFSLASKDSQQRDKAYLFVEAEAPEVVKEKASNLVVILPVQDPQGQSLTHIHLYPKN EENAYDLPPLEKTVLDKQQGFNQGEHINYQLTTQIPANILGYQEFRLSDKADTTLTLLPE SIEVKVAGKTVTTGYTLTTQKHGFTLDFSIKDLQNFANQTMTVSYQMRLEKTAEPDTAIN NEGQLVTDKHTLTKRATVRTGGKSFVKVDSENAKITLPEAVFIVKNQAGEYLNETANGYR WQKEKALAKKITSNQAGEFSVKGLKDGQYFLEEISAPKGYLLNQTEIPFTVEKNSYATNG QRTAPLHVINKKVKESGFLPKTNEERSIWLTIAGLLIIGLVAIWLFYQKQKRGERK >gi|237663596|gb|GG668922.1| GENE 40 38139 - 40022 2196 627 aa, chain + ## HITS:1 COG:no KEGG:EF1093 NR:ns ## KEGG: EF1093 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 627 1 625 625 1107 99.0 0 MKQLKKVWYTVSTLLLILPLFTSVLGTTTAFAEENGESAQLVIHKKKMTDLPDPLIQNSG KEMSEFDKYQGLADVTFSIYNVTSEFYEQRAAGASVDAAKQAVQSLTPGKPVAQGTTDAN GNVTVQLPKKQNGKDAVYTIKEEPKEGVVAATNMVVAFPVYEMIKQADGSYKYGTEELAV VHIYPKNVVANDGSLHVKKVGTAENEGLNGAEFVISKSEGSPGTVKYIQGVKDGLYTWTT DKEQAKRFITGKSYEIGENDFTEAENGTGELTVKNLEVGSYILEEVKAPNNAELIENQTK TPFTIEANNQTPVEKTVKNDTSKVDKTTPNLDGKDVAIGEKIKYQISVNIPLGIADKEGD ANKYVKFNLVDKHDAALTFDNVTSGEYAYALYDGDTVIAPENYQVTEQANGFTVAVNPEY IPTLTPGGTLKFVYFMHLNEKADPTKGFKNEANVDNGHTDDQTPPTVEVVTGGKRFIKVD GDVTATQALAGASFVVRDQNSDTANYLKIDETTKAATWVKTKAEATTFTTTADGLVDITG LKYGTYYLEETVAPDDYVLLTNRIEFVVNEQSYGTTENLVSPEKVPNKHKGTLPSTGGKG IYVYLGSGAVLLLIAGVYFARRRKENA >gi|237663596|gb|GG668922.1| GENE 41 40257 - 41111 798 284 aa, chain + ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 22 284 1 259 279 180 40.0 3e-45 MKSKKKRRIIDGFMILLLIIGIGAFAYPFVSDALNNYLDQQIIAHYQAKASQENTKEMAE LQEKMEKKNQELAKKGSNPGLDPFSETQKTTKKPDKSYFESHTIGVLTIPKINVRLPIFD KTNALLLEKGSSLLEGTSYPTGGANTHAVISGHRGLPQAKLFTDLPELKKGDEFYIEVNG KTLAYQVDQIKTVEPTDTKDLHIESGQDLVTLLTCTPYMINSHRLLVRGHRIPYQPEKAA AGMKKVAQQQNLLLWTLLLIACALIISGFIIWYKRRKKTTRKPK >gi|237663596|gb|GG668922.1| GENE 42 41225 - 41470 112 81 aa, chain - ## HITS:1 COG:no KEGG:EF1095 NR:ns ## KEGG: EF1095 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 79 1 79 97 65 73.0 5e-10 MRAKLFLILRNRVLSRVVFVILFLHVFFTTNDFTVLLLLLLLNYLLTLEDSAKKTEKSKL GRNLNSRLIGPLSLFIQGLLF >gi|237663596|gb|GG668922.1| GENE 43 41665 - 41868 395 67 aa, chain + ## HITS:1 COG:CAC0976 KEGG:ns NR:ns ## COG: CAC0976 COG2155 # Protein_GI_number: 15894263 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 61 1 60 69 57 57.0 5e-09 MKYLDIIALILLIVGGLNWLLVGAFNFDLVATISGGATTPLAKIIYIIVGICAIYSIKFL APLFREP >gi|237663596|gb|GG668922.1| GENE 44 42227 - 42739 519 170 aa, chain + ## HITS:1 COG:no KEGG:EF1097 NR:ns ## KEGG: EF1097 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 170 1 170 170 288 99.0 7e-77 MELQVTKKAKFFCLAMALLMTLGIFISAGTSVYASDQLEDSEVEAVAKGLEEMYANGVTE DNFKNYVKNNFAQQEISSVEEELNVNISDASTVVQARFNWNALGSCVANKIKDEFFAMIS ISAIVKAAQKKAWKELAVTVLRFAKANGLKTNAIIVAGQLTLWAVQCGLS >gi|237663596|gb|GG668922.1| GENE 45 42859 - 43077 127 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257415712|ref|ZP_05592706.1| ## NR: gi|257415712|ref|ZP_05592706.1| predicted protein [Enterococcus faecalis AR01/DG] predicted protein [Enterococcus faecalis ARO1/DG] # 1 72 1 72 72 124 97.0 3e-27 MDAGSTPAVSIFRKVEKNKKELKPYKIKVLALFFYKQKKARYLPLHFLSHYLSKTTSFSF SIGDFGYCIEHG >gi|237663596|gb|GG668922.1| GENE 46 43550 - 43855 381 101 aa, chain - ## HITS:1 COG:no KEGG:EF1098 NR:ns ## KEGG: EF1098 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 101 1 101 101 174 100.0 1e-42 MKNSYFDGGLATYIGTSILATLITVFTLGICAPWGICMMYNWKIKHTVIDGKRLYFDGTA MQLFGHWIKWLLLTIITLGIYGFWLNIRLQQWITKHTHTLS >gi|237663596|gb|GG668922.1| GENE 47 44190 - 45299 1022 369 aa, chain + ## HITS:1 COG:no KEGG:EF1099 NR:ns ## KEGG: EF1099 # Name: not_defined # Def: collagen adhesin protein # Organism: E.faecalis # Pathway: not_defined # 1 365 1 365 674 640 96.0 0 MTKSVKFLVLLLVMILPIAGALLIGPISFGAELSKSPIVDKVELDHTTLYQGEMTSIKVS FSDKENQKIKPGDTITLTLPDALVGMTENDGSPRKINLNGLGEVFIYKDHVVAIFNEKVE SLHNVNGHFSFGIKTLITNSSQPNVIETDFGTATATQRLTIEGMTSTENGQIERDYPFFY KVGDLAGESNQVRWFLNVNLNKSDVTEDISIADRQGSGQQLNKESFTFDIVNDKETKYIS LAEFEQQGYGKIDFVTDNDFNLRFYRDKARFTSFIVRYTSTITEAGQHQATFENSYDINY RLNNQEATNEKNTSQVKNVFVDGEASGNQNVEMPTEESLDIPLETIEEWEPKIPTLEQAT ETTEENLAS >gi|237663596|gb|GG668922.1| GENE 48 45557 - 46018 210 153 aa, chain + ## HITS:1 COG:no KEGG:EF1099 NR:ns ## KEGG: EF1099 # Name: not_defined # Def: collagen adhesin protein # Organism: E.faecalis # Pathway: not_defined # 1 153 522 674 674 219 94.0 3e-56 MSPTEEENPDESETLGTIAPIIPEKPSVTTEDNGTTETAESSQPEVHVSPTKEITTTEKK QPSTETTVETNKTITSKNQPQILNAPLNTLKNEGSPQLAPQLLSEPIQKLNEANGKRELP KTGTTKTPFMLIAGTLASTFAVLGVSYLQIRKN >gi|237663596|gb|GG668922.1| GENE 49 46143 - 47738 1459 531 aa, chain + ## HITS:1 COG:jhp0343 KEGG:ns NR:ns ## COG: jhp0343 COG1132 # Protein_GI_number: 15611411 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Helicobacter pylori J99 # 2 529 9 543 551 157 25.0 7e-38 MTKKIWSHFQKSFTWYILIGVIVSLCSALAIYFFQQLLDHYQKSFQLGLLVAYGTTIILI PLLSYCEQKPKAYLTNGIYFYLKKLSLIKMSKISYEEYLKLGAGALLQKVEVGAAAGRNI HLNFYGRLFRELIPETLFNLFFIALIDKKLLPAILIGYVIVFILTKILLKTLQKMKEKTL ISEEAMNATLIRGMTELVTFRINRKYKKEIENYALMAEENSQNITKMTMIHEFFFGFFAL LVALIKVSIVVLSFTNVVTLSLGGLVAIVMYIDRIYTPIAIFNVLFVQYNLDKVAYQRLE DFYKKEDDPDLAVSGKALPEIQTISLKDVCFSVDSQTIMSQQNRQFSMNKTYGLIGKSGT GKSTLIKLILGLLKPTEGKVYVNQFPLTQFNLEDYYEKVFYLSQDVPIFQGTLKENIVFN QEISDEQVIEAMYRFQLGELYERLPEGLNTIVSEKGMNFSGGEKQRIAFTRLAFTQAEIL ILDEATSALDEKTEEKVLQEVQKFTHNKLTILVTHRPKTLRFVDEIIDLNE >gi|237663596|gb|GG668922.1| GENE 50 47808 - 48542 581 244 aa, chain + ## HITS:1 COG:L103246 KEGG:ns NR:ns ## COG: L103246 COG0500 # Protein_GI_number: 15673455 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Lactococcus lactis # 1 233 1 242 247 147 39.0 1e-35 MNNNEQELAEFWDEFAEEYEEIQQESPFPIARELRDFLVQEGIFPCQTFLDIAGGTGRYL PFFQEQVTEYTLADISQRMLEIAEAKAQSNVVFLHQSQERLIETGKKFQVVFSAMNPALD TPEKVNALCQLSEEWCLIFRLVEEQDSLFSPFEQESNPQLNWMAQYKAFLKKEQRPFFTK KFFFEASEAISKDFFRSYFEEQWSVPILEQRVQEIFGSHEIKQNQRTIIYELIVIPCKKT ISDY >gi|237663596|gb|GG668922.1| GENE 51 48539 - 48940 535 133 aa, chain - ## HITS:1 COG:no KEGG:EF1102 NR:ns ## KEGG: EF1102 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 133 1 133 133 241 100.0 6e-63 MKKIGAILFIGLFIVGGYTGYRYYADTYKGEKAYAQVPLEIPERKQTVDDNQKSIDGQYS LHYRLTFVKSNGKTQVMDYERTDKNPQPLEPNAYIEATISKKRIIQSPVKIDKKEIPEKA FAQLNNRKTTSDN >gi|237663596|gb|GG668922.1| GENE 52 49050 - 50402 1381 450 aa, chain - ## HITS:1 COG:L18622 KEGG:ns NR:ns ## COG: L18622 COG1113 # Protein_GI_number: 15672791 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Lactococcus lactis # 3 443 2 441 446 541 71.0 1e-154 MSETQQTTLKKQLSSRHITMLALGGAIGAGLFKGSGEAIGIAGPSVLIAFLIGGAVLFIV MSGLGKLVLDGGDTHHGLSGLVRPFLGAHSADFIDWVYYSMWTINIIAEAVAAASFLQLW FPNIPAWFFVFILAILTTLINLYSVRLFAETEYWLAFAKISVIILLIIFGVYLVGQQMLG SGVFPTLQSITDHGGFAPHGMKGIVNSLLVVIYSYGGSELIAITVSEADDPKKAIPKAIR GVMGRIISFYIIPLFLLLIIFPWNTLAGTTVSPFVMVFEKMNIPFAADIVNFVIILALFS SINSGVYASSRLLYFRLKDKKGPMSKLAVLNKHQVPQRSVFFCASVLYLGVILSYFVGDE LFGYLAGSLSYTVLLIWILISAAAFVLSLKRGSLFEKSINLLALIILGLIFIGILFTNSL GVTLLTGLLYFVIFFSYRKKNDSFLLSDES >gi|237663596|gb|GG668922.1| GENE 53 50573 - 50758 236 61 aa, chain - ## HITS:1 COG:no KEGG:EF1104 NR:ns ## KEGG: EF1104 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 61 1 61 61 72 98.0 7e-12 MSAKRFIQLFICYTISMIVAILLTDLFNFSSPIAYLVVASIIGYVVITVPLTIMTLLKNK N >gi|237663596|gb|GG668922.1| GENE 54 50985 - 51245 198 86 aa, chain - ## HITS:1 COG:no KEGG:EF1105 NR:ns ## KEGG: EF1105 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 77 1 77 101 82 89.0 6e-15 MFISFNMFILLIVATILMIFLIIYLTVTGNDKNNKKKQKKEVKRTTPTLNKKTAVPPSQK PNVVTDVAKKERAGKASRTTNTATNH >gi|237663596|gb|GG668922.1| GENE 55 51597 - 52358 899 253 aa, chain + ## HITS:1 COG:L174321 KEGG:ns NR:ns ## COG: L174321 COG0247 # Protein_GI_number: 15673715 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Lactococcus lactis # 1 245 1 246 256 363 72.0 1e-100 MKVSIFSTCVVDLLFPNVGQAMVEVLERYGCETVLPTSQTCCGQPTYNSGYVTESTTTLK NQIDSFDGADYVVGPAGSCVGMMKEYHKFLADDPIYGPKAQRLAERTYEFSQFLYRVLGV KDVGATLYGKATYHRSCHMTRILNERESPFVLLDHVKGLEMIPLGHLENCCGFGGTFSVK IPAISEQMVTEKMNDVIDTGAEILISADMGCLMNIGGKFNRDGKKIKIMHIAEVLNHEVD EARMDQPQIISVG >gi|237663596|gb|GG668922.1| GENE 56 52371 - 53843 1364 490 aa, chain + ## HITS:1 COG:L175101 KEGG:ns NR:ns ## COG: L175101 COG1139 # Protein_GI_number: 15673716 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Lactococcus lactis # 1 487 1 490 490 773 72.0 0 MGLSTSNKPLSERIEESKKDVFMQKAVAKAQDAQWEKREGAREVLGNWPQWRELGEQIRQ HTIQYLPDYLEEFSDNVAKRGGKVFFAQTADEANEYVKQVVLEKKAKKIVKSKSMVTTEV DIDPMLLGLDDVSVMETDLAEFILQMDDWDEPSHIVFPSIHKNREQIRQVFAKKLGYQGD NDPVNLARCAREVMRKFFLEAEIGITGCNFAIADSGLINLNTNEGNADLTISIPKTQIVL MGMERIVPTMREAEVLDNLLARSAVGQNLTTYVTFAGQKNADESDGPEEFHVVILDNGRS KALGTAFQPVLQCIRCGSCLNVCPVYRHIGGHGYGSIYPGPIGAVLSPILGGYKQFGELP YASSLCGACTETCPVKIPLHELLIEHRKVMTDDLKMKHGFEDFQMRMVGKATGSPAMFKA AMKVDHAAAGILSKQKEITVENMYNHGGYLDKGPGLVKGWTDVRDLPRPPKSSENFRSWF KKHQEGEKND >gi|237663596|gb|GG668922.1| GENE 57 53836 - 54555 870 239 aa, chain + ## HITS:1 COG:L176579 KEGG:ns NR:ns ## COG: L176579 COG1556 # Protein_GI_number: 15673717 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 6 238 5 226 227 214 49.0 1e-55 MTNEAIQNREPFLQNLREKLGVEKQPVSAHPFEPVNHLPEEQLADKTPAELLTIVKERVE TIHTNLVETTQENLLTTIQQIVAEFGGGNLLLPTDARFEAYGLADLAKSLEAVSVKQWQP GSEQREANIQTAAQANIAIAFAEFLLAESGTIVVESNAGQGRALHFLPKHYISIIPFSKL VPRSTQPAAFYTEKIEKGEKIGSAIHFISGPSNSGDIEMQLVVGLHGPLEVCYVVVMDR >gi|237663596|gb|GG668922.1| GENE 58 54776 - 55324 613 182 aa, chain + ## HITS:1 COG:lin1308 KEGG:ns NR:ns ## COG: lin1308 COG0681 # Protein_GI_number: 16800376 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Listeria innocua # 23 163 26 179 188 146 53.0 2e-35 MSLKSKELIKTVVFFACLALGLFLLRQFVFTPVVVRGHSMDPTLADGERVITLKNTEINR FDIITFPAPDEPDKNYIKRVIGLPGDTIAYKDDTLYINGKEVDEPYLDEFKKALTDGQPL TGDFSLKEKVPADSYFVLGDNRRNSKDGRVIGFIHKKDILGEVKFVMWPFSRFGPIPEVS KQ >gi|237663596|gb|GG668922.1| GENE 59 55435 - 55647 301 70 aa, chain + ## HITS:1 COG:no KEGG:EF1112 NR:ns ## KEGG: EF1112 # Name: rexB # Def: exonuclease RexB # Organism: E.faecalis # Pathway: not_defined # 1 58 1 58 1196 110 100.0 1e-23 MSVQFIRGTAVADLEAPLIQATKQWLEEDAQHEVFYLVPNHIKFEQEIQVLQKLRQLQTT TSDSITSLAS >gi|237663596|gb|GG668922.1| GENE 60 56015 - 59374 3202 1119 aa, chain + ## HITS:1 COG:lin2369 KEGG:ns NR:ns ## COG: lin2369 COG3857 # Protein_GI_number: 16801432 # Func_class: L Replication, recombination and repair # Function: ATP-dependent nuclease, subunit B # Organism: Listeria innocua # 1 1117 69 1157 1157 550 31.0 1e-156 MAWYYLQHTPFYSADVLSDAGAAMIFRKILVEAEEELQIFRGEINKPGFIQQLFQLYQEM REGNIEIAELYPFLEKQTENPKGQDLQLKFQDLTLIFTRFQLQMSQYGYESAEIIQHLSE YLQTVDLSNVQFVISGYQQFTARELKLIEVLMAQAGSVKVALLLDKQYPHDLPDPRSLFY EAGQTYHQLYQLARQKQIPILSDYVEKKEVLITNPDLQGLNDYWIQSQEHLPPLSTADWR GDGLFLWRAENVKEELTHVATEIRRLVVEEGYRYKEIQVLTRDLDCYENLLEPIFAEHEI PVYVDRDMAMDRHPLVEWIESLFAIHSYNYRYRDVLRFLRTELFMPMNQLATSEESLTDW LNQRNAWRRKVDITENVVLAYGYEGYYWSQEKDWEFIRYDFEAEEQEDVATMEEESNAIR QSLQRLLPSYFQAMISAKTGLEAATVFYHFLLQSGVATQLKMWRLQAIEAGQLETARNHE QTWDALMSLLDEYVTVYGESSFDFTTFQEIFVSGLEGLHYSKVPTAIDQVQVRAMDLTRP GAAKVTFAIGMTEEIFPQKIENKTLLSDEERQTINDTLTENQYLRGTTGRKIAQEPYVAY LVFSSARERLYLTYPSVKDTAQEVKPSPYFKNIQKDLNLPVFEKNETTIFDDETTSLAHI STYRTLIGELTRLKRQRKETQEGLLPFWLNMEKALMNQSIAPLAKQVFESLTHQNIPEKI DEVLAEPLYGKDIYTSVSRMESFYRCQYQYFSRYGLRLKERDVFGLSPAATGEFFHEALD QFFKLLIMNQRNLSELTDQEVNLLAEEVLNSILGDARFSVLTTSSRMNYIRYQLSQTIKK VSWALKRQSQRSGMTTVQTEVLFGQIAAKKGISGLELPLKNQGKIHVRGKIDRIDQLVTP ESTYLGVIDYKSSHRKFNMTEAYYGLAMQMLTYLDVALMDAVQLVGQEAKPAGSLYLHVH NPTLSYEGKDDIEQQMLKKYQFDGLLMKDPDLLDHLDTSLQAKQSSLLFPIEESAKEQIK PGRRQEDKFVTEPELGALLSHNRNKFIEAGNQIIGGEVQLNPAYQGKERIACRYCPFRSV CDFDVMLKENNYHRIENLSKEEIMARLLNKDEEGATEDE >gi|237663596|gb|GG668922.1| GENE 61 59367 - 61493 2091 708 aa, chain + ## HITS:1 COG:BS_addA KEGG:ns NR:ns ## COG: BS_addA COG1074 # Protein_GI_number: 16078127 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Bacillus subtilis # 8 681 5 673 1232 452 40.0 1e-127 MSKTIPLRPANEQFTDSQWQAVFDGDENILVSASAGSGKTTVLVRRVIEKVKSGVDIDRL LIVTYTEAAAREMKERIQVALQKAMNEEQDPERRRHFSRQIALLPTANISTLHAFCLTVI RRFYYLIDIDPVFRMLTDETETLLLKEDVWDALREQFYAENQEAFYQLTANFSNDRSDDG LTNLIFSFYEFAKANPDPEAWINGLTQAYEVGDQLGESKLFQTYLKPLAVETLQRTLQRY EEMVTLTEGEEKLQKIWYLAQNEKEQTKQFLQFLERNDLESAYNLTELLSFDRYPTVRAE ELKPTAEQAKQLREQNKKALNDLKKQLFTLSPDAMKQVLKEATPIVQEMAHVGKQFMEAY GAEKRLKNLVDFNDLEHYTLAILAKNQADGWHASEASVYYREKFDEVLVDEYQDINQLQE SILYWLRRPLSTEGNLFMVGDVKQSIYSFRLADPTLFIEKYNQYGQGKEGKRIILAENFR SRKDVLDFTNLVFSQLMDERVGQIAYDESAALVHGFDQFSEAADYSTELLIYEKKATESV EFPELQSPELLIEDKTEGELYVTALKIRELIDQNFLIYDKKLKTDRPITYQDIVLLTPTK KNNLTILDVFKSLEIPVQVNDAQNYFQATEIRTMIALLQLIDNPYQDIPLAAVLRSPIVG LKENELVLIRLANKETSYYEAFLTFNQKMEPTMEEAVVQEKLYVLLNH >gi|237663596|gb|GG668922.1| GENE 62 61535 - 63160 1421 541 aa, chain + ## HITS:1 COG:BS_addA KEGG:ns NR:ns ## COG: BS_addA COG1074 # Protein_GI_number: 16078127 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Bacillus subtilis # 1 531 713 1232 1232 318 38.0 2e-86 MLWTIYRETAYLDYVGGLPVGKQRQANLYALVDRAAAYEKTTFRGLFQFVRFIEKMQEKD KDLAEPVVLSEENAVRVMTIHASKGLEFPVVFVLDMTKEFNVSDLNERYIFEENLGVGIR YLQPEERVMYDTLPFLAIKQVRLRKLLSEEMRKLYVALTRAEQKLFLVGSYKDQAAMWKE WLKVGDVETLVLPAENRLQSKSSLMNWVGMTLVRHQKADEYQQEVVVSNVPQVKKHPANF HIQWFNEEQLRAAIQQLQLPERQAEDLAEKAQLSADKINRGLARLSFNYPFEVATRTTSY QSVSEIKRVFDDPDNKEIGKIEVREDNTIQAQPLIVNRMIEGDLSKPKFLDTVQAPSAAE IGTATHYLLQLIDLSKQPSYEEVRAVQERLVENKLILPAIAEKMNLEQIVAFFDTALGKQ LIQHHQTVRREQPFSMLIEAEELIQNYPETTQDDLLIHGIIDGYIELDNQCILYDYKTDH VKGTSPQAISEIVERYRGQMNLYRRALQEATHKEVSHVYLILLNGGVIIDMQTGNVVDFI K >gi|237663596|gb|GG668922.1| GENE 63 63230 - 63574 466 114 aa, chain + ## HITS:1 COG:lin1183 KEGG:ns NR:ns ## COG: lin1183 COG1733 # Protein_GI_number: 16800252 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 6 109 2 104 107 101 52.0 4e-22 MEKVKTESFVLCPKFEKSFSILGKKWNGLIIDVLLERGPQRFGELKEKIPMLSDRVLVER LKELEAEGIITKAVRCGEGNRLEYFLTEKGEDLQLAMEQIQHWAEKWVKDEECS >gi|237663596|gb|GG668922.1| GENE 64 63894 - 64940 1413 348 aa, chain + ## HITS:1 COG:L0354 KEGG:ns NR:ns ## COG: L0354 COG0016 # Protein_GI_number: 15673911 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Lactococcus lactis # 1 344 1 344 346 539 72.0 1e-153 MTLQAQLEALRDNTLKEIAQVATLKELNQIRVETLGKKGPITEVLRGMKNLSPEERPVVG GFANEIRDLLTEAIEARKVVLENEALNAALKEESLDVTLPGKQMPQGTRHILTQVMEEIE DIFLGMGYQVVEGYEVESDHYNFERMNLPKDHPARDMQDTFYISDEMLIRTHTSPVQART MEKHDFSKGALRMISPGKVFRRDTDDATHSHQFHQIEGLVVDKNVTMGDLKGTLEVMMKK MFGEDRKIRLRPSYFPFTEPSVEVDVSCFKCGGAGCNVCKHTGWIEILGAGMVHPDVLQM SGIDPTEYSGFAFGLGPDRVAMLRYGVNDIRNFYQNDLRFLNQFKVKE >gi|237663596|gb|GG668922.1| GENE 65 64948 - 67371 2848 807 aa, chain + ## HITS:1 COG:SP0581_2 KEGG:ns NR:ns ## COG: SP0581_2 COG0072 # Protein_GI_number: 15900491 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Streptococcus pneumoniae TIGR4 # 149 807 1 655 655 677 55.0 0 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKKGKMRGEVSNGMI CSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSMR GVAYEVGAIYRQTPQFNDPELKEDASDNVENYVTVTVEDSQDAPAYQIRVIKDVTIAESP QWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATATEELITL DGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSKQF NLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEAQVAVTLE RINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIYGY DHLPSTLPSGETVAGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMKESQT TRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNLPTEE NHLALALTGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISYQATTAIPEMHPGR TAWIYLEGEVVGFVGQVHPTTAKAYDIPETYVAELNLQQLVAIEAGGVTYEAVSKFPAVS RDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGEKLGAGKKSMAYSLTFVNAEA TLVDEEINRSMEKVEKALIEKHQVEVR >gi|237663596|gb|GG668922.1| GENE 66 67567 - 68232 735 221 aa, chain - ## HITS:1 COG:SP0607 KEGG:ns NR:ns ## COG: SP0607 COG0765 # Protein_GI_number: 15900515 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 5 220 2 217 219 249 64.0 2e-66 MPFSEEMRQLLTANNFQFLFNGLKLTLYISFVSIILSTIFGTILAVLRNQTHGPLKLLAS IYVEVVRNIPNLLWIYVIFLIFKIKSTPAGIVSFTVFTTAALAEIIRGGLNGVDKGQIEA ARSQGFSNWQILYHIVLPQAIRNVLPAIVSQFVTVIKDTSFLYSVIALQELFGKSYILMG RYAQTGQVFTIYGIVALIYFIINFSISQFSRWLSRNWAKSY >gi|237663596|gb|GG668922.1| GENE 67 68244 - 68957 549 237 aa, chain - ## HITS:1 COG:SP0608 KEGG:ns NR:ns ## COG: SP0608 COG0765 # Protein_GI_number: 15900516 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 17 236 4 224 225 254 60.0 1e-67 MFLLANISWLEEGPFALYRWEALFQDWRIFGQAFLYTILLSLGAILVAFALGIFFGSLSA TKSKLLHAISRVYVEFFQNTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGLYHGAYI SEVVRSGIGAVPRGQFEAAYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTV AIISGADVMFAANSWSSVNLNYIPAFALAGFLYFILCFPLANLARKMEEKNKKAYSR >gi|237663596|gb|GG668922.1| GENE 68 69003 - 69830 1134 275 aa, chain - ## HITS:1 COG:SP0609 KEGG:ns NR:ns ## COG: SP0609 COG0834 # Protein_GI_number: 15900517 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 42 274 18 247 254 241 54.0 1e-63 MKKQNKWLAGLSLLVLAGIIVGCGSGNNDSTSKSASSNKTVTVEQLKKAGKIKVGVKEDI PNFGYMNPDTNKNEGMEPDIARLIAKEITGSEENVEFVGVTAKTRGPLLDNGELDMVIAT FTITDERKKTYNFTTPYYTDEIGFLVRKEDNFSSMKDLDGKTIGVAQSATTKENLEKKAQ EEGIKFTYQELGSYPELKTALTSKRIDAFSVDKSILSGYVDGKTEILKDGFSPQEYGITT KKANTELNDYLNGLIEKWEKDGTLEKIYQDWGLKN >gi|237663596|gb|GG668922.1| GENE 69 69865 - 70596 636 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 249 51 2e-64 MISLEHVNKYFGEHHVLKDITLNVEQGEKIVIIGPSGSGKSTLIRCMNQLEKVNDGSVVI DNIDITKPKAPIQKVRQKVAMVFQNFNLYAHKTIIDNLTLAPIKVMGVSKDEAVRTGMEY LERVGLADKASAYPSQLSGGQQQRVAIARALNMHPEIILFDEPTSALDPEMIQEVLDVMV DLSKQNITMVCVTHEMGFARQVADRVIFMDQGQIIEQGTPEHFFTSTENPRAKEFLSKII HNG >gi|237663596|gb|GG668922.1| GENE 70 70861 - 71688 757 275 aa, chain + ## HITS:1 COG:lin1200 KEGG:ns NR:ns ## COG: lin1200 COG0796 # Protein_GI_number: 16800269 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Listeria innocua # 6 270 2 265 266 324 58.0 1e-88 MRMSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEM ADFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGT LGTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVESNQYRSSVAKKIVAETLQALQLKGL DTLILGCTHYPLLRPVIQNVMGNHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQPHEF YTTGSAKMFEEIASSWLGIENLKAQQIHLGGNEND >gi|237663596|gb|GG668922.1| GENE 71 71681 - 73036 470 451 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|165937309|ref|ZP_02225873.1| non-canonical purine NTP pyrophosphatase RdgB [Yersinia pestis biovar Orientalis str. IP275] # 231 438 5 213 223 185 48 3e-45 MIRHDSRAPKELRKITIETNVFKHPEGSVVISFGDTKVICSATVEEKVPPFLRGGGTGWV AAEYSMLPRATNTRNIRESAKGKLTGRTMEIQRLIGRSLRAVVDLEKLGERSVVVDCDVI QADGGTRTASITGAFVALRLAVNHLLMTGALAEDPIKEHLAAVSVGILPDGYCVLDLDYA EDSNAAVDMNIVMTESGEFVEIQGTGEEATFSGDELNAMLFYGKTGIEELIAYQKEALYA LASEEVPSQDSEEKVIVIATRNPGKAKEFSSIFGEKGYTVKTLLDYPNLPDVEETGRTFE ENARLKAETIAEILQKPVLADDSGLIVDALGGMPGIYSARFAGEPTNDASNNAKLLHELT GVPKEKRQARFHCTLVFAEPKKESLVVEAEWPGEVGTIPRGEGGFGYDSLFYVAELGKTA AELSGEEKNKVSHRGQAVAKLKEQWEEWLKK >gi|237663596|gb|GG668922.1| GENE 72 73049 - 73561 564 170 aa, chain + ## HITS:1 COG:lin1203 KEGG:ns NR:ns ## COG: lin1203 COG0622 # Protein_GI_number: 16800272 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Listeria innocua # 1 168 1 168 174 159 47.0 3e-39 MKILVVSDNHGDRDCLVDLVNHYEGQVDALFHCGDSELEPTDELWQKLIVVQGNCDFYDE FPKTVTKKVGDQVIYMTHGHLANVRMGLTTLALQAEEAGATIALFGHTHVLGAERHNNIL FVNPGSIRLPRGPVQEKTYAIIESTPEQYLVQYYNKEHQPLERLKATFTK >gi|237663596|gb|GG668922.1| GENE 73 73655 - 74419 572 254 aa, chain - ## HITS:1 COG:BS_glcR KEGG:ns NR:ns ## COG: BS_glcR COG1349 # Protein_GI_number: 16080683 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus subtilis # 9 251 4 249 258 103 32.0 4e-22 MKSSLETIEKRQQNILALLQKNKQMTTYKLADALNVSLSTIRRDLNVLETKNDIIRKYGY CIYNDQNQKDFDQSGPELLKQAIARVACSYLSDYDTVFINSSSTALNILHYLKADHLTIV TNNLKIATKPHVSQYNYILTGGELRFPKEVLVGDIAINTITATHADVCVIGCSGVSLEHG VTTKIFNEAKINELMIKQTTKVKILVADHRKIGLTSKFKIADITAFDCLITDKHCSSTLI TELRKTGLKVIQVD >gi|237663596|gb|GG668922.1| GENE 74 74613 - 75680 1096 355 aa, chain + ## HITS:1 COG:ECs5168 KEGG:ns NR:ns ## COG: ECs5168 COG2220 # Protein_GI_number: 15834422 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Escherichia coli O157:H7 # 1 355 3 356 356 483 62.0 1e-136 MSKSIHEITKESWLKATFPEWGTYLNEEINQTTVLQGTVALWWLGCTGIWLKTHENTNIL CDLWCGTGKQTHGNGLMKNGHQMMRMSGCQKMQPNLRTQPFVIDPFEIKEVDALVVTHIH SDHLDIHTAAAVHQNCPKALFIGPKEVVKTWQHWGVPAEKTRVIEPGQEIKVNDVNVVAL EAFDRTALITSDDPENTFKGKMPQDMNELAVNYLFETSGGTVYHAGDSHYSNLFAKHGNQ YAIDVCLGAYGENPRGITDKITSVDMLRMAESLNAKVVIPVHYDIWSNFMADPKEIMEIW KFKKDRLHYQFKPYIWQVGGKFVYPDDKDNLEFNFDRGFDDVFVKENDTPFPSFL >gi|237663596|gb|GG668922.1| GENE 75 75698 - 76156 431 152 aa, chain + ## HITS:1 COG:lin2929 KEGG:ns NR:ns ## COG: lin2929 COG1762 # Protein_GI_number: 16801988 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Listeria innocua # 21 149 20 146 148 80 37.0 1e-15 MLTYFWEQELIHYSDKEPVSWQEAIQESCLILLQKHIIDQSYVDEIIQCVETFGPYIIIA PEVAMPHSSEESAGVFGTAISFTKFKQAVTFAGDQEAKTATLFFTLAAQNPAEHLENIQQ LMDLLMTDGVIADLLETNTLMDFKEVMEKYQL >gi|237663596|gb|GG668922.1| GENE 76 76169 - 77656 1501 495 aa, chain + ## HITS:1 COG:SP2038 KEGG:ns NR:ns ## COG: SP2038 COG3037 # Protein_GI_number: 15901859 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 11 473 10 469 485 394 47.0 1e-109 MGEFLLNSWTYFATNVLTQPAYLIGFIVLLGYLLLRRPFYECLAGFLKATVGYFILSVGS GGLVNNFRPILVGLKERFNLQAMVTDPYFGQNAVDAGLMKTFGRTFGDVMILLLIAFIMN ILLVRFQKYTKLRAVFTTGNVQIQQAATAFWILLFCFPNLGRIEVLIFMGLILGCYWAVA SNLTVGITQELTEGAGFAVAHQQMFGIFIFAKLAEWLKKRDQKKHRSEKVDKKLEDIELP GFLSIFNENMVATSILMLFFFGIILLVLGQDYLIQAKFMQEGQSFFFYIMTTSLNFAVYL AILQLGVRTFVDELTQSFQGISNTILPGAVPGIDVAATFGFGSPNAVTIGFLFGALGQFL MIGLLILLKSPTIVIAGFIPLFFDNAVIAVYANNRGGVKAACLFPFLSGLIQVGGSALFA TWIGLSQYGGYLGMFDWATAWPLFTIIMKVLGYVGVAVVVIGLLIIPQLQYRKNPEGYFM IVNDYEQYAKKFQEN >gi|237663596|gb|GG668922.1| GENE 77 77671 - 77970 416 99 aa, chain + ## HITS:1 COG:no KEGG:EF1128 NR:ns ## KEGG: EF1128 # Name: sgaB # Def: phosphotransferase enzyme II, B compnent SgaB # Organism: E.faecalis # Pathway: Ascorbate and aldarate metabolism [PATH:efa00053]; Phosphotransferase system (PTS) [PATH:efa02060] # 1 99 1 99 99 170 97.0 1e-41 MRILVSCANGSGTSLMMMRSVEKAMKELGVPITKIHHCAISEGKSSASQYDVVFTPVNFL QMFQQAEKRGVTVIGIKNVMSAKEIQEKYMASEHYQKSE >gi|237663596|gb|GG668922.1| GENE 78 77984 - 78622 897 212 aa, chain + ## HITS:1 COG:SP2035 KEGG:ns NR:ns ## COG: SP2035 COG0269 # Protein_GI_number: 15901856 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Streptococcus pneumoniae TIGR4 # 4 211 6 220 221 255 60.0 4e-68 MKRPNLQIALDHNSLEDALADCMKVGEIVDIIEVGTILCLQEGQKAIRCLKRMFPNKTIV ADTKCADAGGTVARNVAQAGADFMTVICCATLPTMAAAQKEVRELQVELYGNWTMQQARQ WRELGINQVIYHQSRDALLAGGSWGEKDLNKVQELIDLGFEVSVTGGLTVETLELFQTMA VATFIAGRGITESKNPEQAAKDFQKKIDQIWK >gi|237663596|gb|GG668922.1| GENE 79 78627 - 79487 626 286 aa, chain + ## HITS:1 COG:sgbU KEGG:ns NR:ns ## COG: sgbU COG3623 # Protein_GI_number: 16131453 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli K12 # 3 283 16 295 297 301 53.0 1e-81 MARIGLYEKALPQNLTWAERLTWAKKLGFDFLEMSIDESDERLARLAWTPSQLQELSQLM VKEDFFIHSLCLSGHRRFPLGSLNKETREKGREILSQAIRLAHQLNIRVIQIAGYDVFYE EKTAETREFFLQGLKKGVEEAAQYGVILAVEIMDDPFMNSIQKFLEIKEQIPSPFLHVYP DLGNLSAWPENNPAVELEKGIAEIAAIHLKDTFAVTDTFEGKFREVTFGEGCVDFTGLLK TLKRLNYSGPFLIEMWNETDLNFQEKIQAAQQYLYPKLAEVGYYEQ >gi|237663596|gb|GG668922.1| GENE 80 79477 - 80187 669 236 aa, chain + ## HITS:1 COG:SPy0179 KEGG:ns NR:ns ## COG: SPy0179 COG0235 # Protein_GI_number: 15674384 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Streptococcus pyogenes M1 GAS # 7 236 5 233 234 298 61.0 6e-81 MNNKAIIQAMKQRVYEANLALPKLGLVKLTWGNVSEINRSLGIIVIKPSGVKYQEMTKEQ MVVTDLNGQLLETNALKPSSDLPTHLYLYQKMPEIGAIAHTHSLNSVTWAQAGRALPPYG TTHADTFYGAVPCTRALSESEIKENYEEETGKVIVETFHEQELDPLAVPGVLVYGHGPFT WGMTPEKAVENSLILDEICSMARLTETINPDVEPIDHFLLDKHYLRKHGISAYYGQ >gi|237663596|gb|GG668922.1| GENE 81 80445 - 80933 688 162 aa, chain + ## HITS:1 COG:L110441 KEGG:ns NR:ns ## COG: L110441 COG0517 # Protein_GI_number: 15673261 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Lactococcus lactis # 1 149 1 147 153 107 38.0 1e-23 MIGTAVKELLLEKQETFLVPAENVANVMCLNPLSHAALVLSKVRYSKIPVLDKGDRFVGL IGLTDVVDKMFDLTSVDFEKLNEFTVADVMEVNVPVIGESWDLEEVLHLLVDASFLPVVD DNQRFKGIITRKEILKAVNHMAHELEKHHLVLPKSEEEMKVI >gi|237663596|gb|GG668922.1| GENE 82 81014 - 81715 928 233 aa, chain + ## HITS:1 COG:BS_ykuQ KEGG:ns NR:ns ## COG: BS_ykuQ COG2171 # Protein_GI_number: 16078482 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Bacillus subtilis # 1 233 4 236 236 287 69.0 1e-77 MDAYEIIQYIGDAKKQTPVKVTLKGQLKEVTFPETIKVFNNCKTGTLFGDWADVKPFLEA NKEKIEDYVVENDARNSAIPFLDLKDINARIEPGALIREKVEIGDQAVIMMGAILNIGAV VGAGTMIDMGAVLGGRATVGKHCHIGAGTVLAGVIEPPSAAPVVIENEVVIGANAVVLEG VRVGEGAVVAAGAVVVEDVPAHTVVAGVPAKVIKQIDDKTKSKTEILEELRKL >gi|237663596|gb|GG668922.1| GENE 83 81752 - 82921 1251 389 aa, chain + ## HITS:1 COG:SP2096 KEGG:ns NR:ns ## COG: SP2096 COG1473 # Protein_GI_number: 15901911 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Streptococcus pneumoniae TIGR4 # 19 385 3 371 376 452 58.0 1e-127 MAAFDYPQNEGVAFVEQEELIAIRRQLHQIPEIGLEEKETQAFLLNEIDKMKQPYLQVRT WQTGILVFIEGKNPQKTIGWRADIDGLPIQEEVVSAFQSKRLGFMHACGHDFHMTIGLGV LKELSQQQPDNNFLFLFQPAEENEAGGMLMYEDHAFGEWLPNEFYALHVNPDLPVGTIST RVGTLFAATCEVNITLKGKGGHAAFPHQANDMVLAATNLIQQAQTIVSRNVDPVVGAVVT FGTFHAGTACNVIAEEATLSGTIRTLTAETNEQTQRRIREISEGIAQSFQCEVTVHLDQK GYLPVVNEPACTTNFIEYMSKQATVQFQQAPVAMTGEDFGYLLSKVPGTMFWLGVASPYS LHSAKFEPNEEALLFGVEAVSGFLKSLDN >gi|237663596|gb|GG668922.1| GENE 84 82967 - 83887 925 306 aa, chain - ## HITS:1 COG:SPy1897 KEGG:ns NR:ns ## COG: SPy1897 COG0668 # Protein_GI_number: 15675710 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Streptococcus pyogenes M1 GAS # 45 299 19 270 281 198 42.0 9e-51 MLILGLASTETVDSSAPDLAEATVKKVSALQRFWNNINWDAIVATLIEKSLSILFLIFLF FIIQRIGKYLIDRTYANYSKKQHFSESRLKTLHTLIINAFQYTLFFFFIYSLLTIVGVPV GSLLAGAGIAGVAIGLGAQGFMNDLITGFFIILEQQMDVGDYIRLLALNIEGTVTSVGLR TTQIKAVDGTVHFIPNRNITTISNLSRANMQVLIDVRINPEEGYEKICEVITEVNETLKE KYIESIQTGPDIFGMVDLGNGNFAVRTTMYVLNGKQFAVKEEFLAQYIKALTEAGFTIPN TPIIAK >gi|237663596|gb|GG668922.1| GENE 85 84057 - 84419 172 120 aa, chain + ## HITS:1 COG:no KEGG:EF1137 NR:ns ## KEGG: EF1137 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 30 120 1 91 91 160 98.0 1e-38 MKVSIEWAKNDLLSKLPVTIFIDERCATRLTADKRRTFIFHNPVALRLGSRFFSSQIIEI AESCTLKVSFNWSCVYLFCIWLLAVKLWIGSVSGRTIVVVALIGVLTYWRRYLLKIKKMT >gi|237663596|gb|GG668922.1| GENE 86 84496 - 85320 1063 274 aa, chain + ## HITS:1 COG:lin0819 KEGG:ns NR:ns ## COG: lin0819 COG0656 # Protein_GI_number: 16799893 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Listeria innocua # 1 274 1 274 274 372 63.0 1e-103 MTLDKTKKLANGNEMPRLGLGVWRVEDGSEATNSVKWALEAGYRLIDTAAVYKNEAGVGE GIRQSGIPREEIFVTTKLWNEDQGYENAIKAFDKSLEKLGLDYVDLYLIHWPVAGKYKES WKALEEIYASGRAKAIGVSNFHQHHLEDLLTEANVVPMVDQIELHPTLTQEPLRKYLAEN KIAVEAWSPLGQGNLLSEPVLVKIGEKYGKSAAQVIIRWHLQNDIIVIPKSVHEKRIQEN FAVFDFELTPEEITAINQLNKDHRFGADPDNFDF >gi|237663596|gb|GG668922.1| GENE 87 85371 - 86093 783 240 aa, chain - ## HITS:1 COG:lin1909 KEGG:ns NR:ns ## COG: lin1909 COG2071 # Protein_GI_number: 16800975 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Listeria innocua # 3 239 2 237 244 210 45.0 2e-54 MTKKIIGIAGNQLLQAAEVFHGNQVTYTPQGFVSAVQAAGGVPLVLPIGPKELAATYIQQ IDKLLLAGGQDVAPEFYGQEPHIKLEETNRDRDEFELALIEEALKQNKPIFAVCRGMQLV NVALGGTLYQDLSMYPQWSVKHGQQPTQPIFATHRIDVEPDSQLSNIYGTTGQVNSYHHQ ALHTLGKDLRVTAWSSDGLAEAVESTNEEQPLLAVQWHPELMYARDAKSQALFNYFVQKL >gi|237663596|gb|GG668922.1| GENE 88 86236 - 86616 460 126 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 [Streptococcus pneumoniae SP3-BS71] # 1 126 1 126 126 181 65 4e-44 LTMKMAHTCVRVKDLEASLDFYQKAFNFEESRRRDFPENKFTLVYLTLPGDDYELELTYN YDHEAYDLGNGYGHIAISTDDLEGLHEKHQAAGLTVTDLKGLPGTAPSYYFVVDPDGYKI EVIRER >gi|237663596|gb|GG668922.1| GENE 89 86759 - 87205 371 148 aa, chain + ## HITS:1 COG:L99869 KEGG:ns NR:ns ## COG: L99869 COG0494 # Protein_GI_number: 15674214 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Lactococcus lactis # 4 144 5 144 146 160 56.0 5e-40 MKTPTFGKREETLTYQTRYAAYIIVSKPENNTMVLVQAPNGAYFLPGGEIEGTETKEEAI HREVLEELGISVEIGRYLGEADEYFYSNHRQTAYYNPGYFYVANTWRQLSEPLERTNTLH WVAPEEAVRLLKRGSHRWAVEKWLAAAS >gi|237663596|gb|GG668922.1| GENE 90 87269 - 88081 1014 270 aa, chain - ## HITS:1 COG:SP1291 KEGG:ns NR:ns ## COG: SP1291 COG0561 # Protein_GI_number: 15901151 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pneumoniae TIGR4 # 1 269 1 268 268 277 53.0 1e-74 MSIKLVAIDIDGTLLNSQHKITPRVKEALQKANEQGVRIVLCTGRPLPGVKEQLDELALY GENDFVITYNGSLVQATKDNTIISRYTLSYEDFLEIEMYSRKVGAHLHTIDDSAIYTANR NIGKYTIHEASLVNMPLKYRTVDEMTPEMNIIKMMMIDEPEVLDPAIAKLPLHFTEKYTT VKSTPFYYEIMNKNASKGNALAKLADHLGLNKDEVMAIGDNENDLSMIDYAGIGVAMGNA TENVKTIADVHTTSNDEDGVAQIIEKMVLI >gi|237663596|gb|GG668922.1| GENE 91 88100 - 89470 1353 456 aa, chain - ## HITS:1 COG:SP1290 KEGG:ns NR:ns ## COG: SP1290 COG1078 # Protein_GI_number: 15901150 # Func_class: R General function prediction only # Function: HD superfamily phosphohydrolases # Organism: Streptococcus pneumoniae TIGR4 # 13 449 3 426 434 538 62.0 1e-152 MTIPYKEQRLPIEKVFRDPVHNYIHVQHQVILDLINSAEVQRLRRIKQLGTSSFTFHGAE HSRFSHSLGVYEITRRICEIFQRNYSVERLGENGWNDDERLITLCAALLHDVGHGPYSHT FEHIFDTNHEAITVQIITSPETEVYQILNRVSADFPEKVASVITKQYPNPQVVQMISSQI DADRMDYLLRDAYFTGTEYGTFDLTRILRVIRPYKGGIAFAMNGMHAVEDYIVSRYQMYV QVYFHPVSRGMEVILDHLLHRAKELFENPEFDYDLQASLLVPFFKGDFTLQEYLKLDDGV LSTYFTQWMDVPDSILGDLAKRFLMRKPLKSATFTNEKESAATIAYLRELIEKVGFNPKY YTAINSSYDLPYDFYRPNKDRHRTQIELMQKDGSLVELATVSPLVAALAGQSQGDERFYF PKEMLDQGNKKHYDLFDETYREFSSYIHNGALVLKK >gi|237663596|gb|GG668922.1| GENE 92 89467 - 90318 800 283 aa, chain - ## HITS:1 COG:SPy1220 KEGG:ns NR:ns ## COG: SPy1220 COG0095 # Protein_GI_number: 15675184 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Streptococcus pyogenes M1 GAS # 28 240 33 248 283 194 46.0 2e-49 MSTTFPLHTESFMLLDSGCLTNSDYFLPFALTDVLTTFSGMQHQPIIHFWQLDQAMILGM KDTRVPHLKEGIASLQENDYSVVVRNAGGLGVIADSGILNVSLILPNNSEHKLSIDAAYE LMWAWLRQSFPEKEIDAFEITTSYCPGTYDLSIGGQKFAGIAQRRVKDGIAVMIYISVNG NQLARGEVVRDFYLAGLQEQFGENGYPPVDPAVMANLETLIETPLTIDAVKTRLIEALPQ QFEKSIDPNLTEPIITSEWFQTNLTVQLEKMAQRNALIKGEIV >gi|237663596|gb|GG668922.1| GENE 93 90614 - 91051 668 145 aa, chain + ## HITS:1 COG:SA0563 KEGG:ns NR:ns ## COG: SA0563 COG4506 # Protein_GI_number: 15926284 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 9 143 9 137 142 58 33.0 4e-09 MDLSTGVPVSIQLKTIVQQGNEQKDFFFDLEGQLVKMGDTLYIRYKEELLEDTEPTPVTI KIEPDGHVQLIRAGELRMRLRFGYQEKLDTSYRTPYGLLQISTFTHNLRVSLKDQPMSGK ILVDYDLYSQTERIGEYHLELEFTA >gi|237663596|gb|GG668922.1| GENE 94 91128 - 91745 904 205 aa, chain + ## HITS:1 COG:SPy1895 KEGG:ns NR:ns ## COG: SPy1895 COG3343 # Protein_GI_number: 15675708 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, delta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 171 1 170 191 116 55.0 3e-26 MEINVFEGLNKKELSMIEVAHAILEQHADVMDFSDLVNQIQNYLGKSDSEIRDQLAQFYT DLNIDGSFISLGDNRWGLRSWYPIDSIDEEVTHGLEEDEEDAPRRRKRKKVNAFITNPND EDVIDYNDDDPEDAELTNDDEEDILYDDEEDEDEEIKAYNSDLQEIGADSDDDEEDIPQI EEDLTIIDDDDVEDEDDFDDEYSEE >gi|237663596|gb|GG668922.1| GENE 95 92053 - 93663 1983 536 aa, chain + ## HITS:1 COG:SP0494 KEGG:ns NR:ns ## COG: SP0494 COG0504 # Protein_GI_number: 15900408 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Streptococcus pneumoniae TIGR4 # 2 532 3 533 535 878 79.0 0 MTKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINVDPGTMSPYQHGEVF VTDDGAETDLDLGHYERFIDINLNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITN EIKEKIMRAAKMTDADVIITEVGGTVGDIESLPFLEALRQMKADMGSDNVMYIHTTLIPY LKAAGEMKTKPTQHSVKELRSLGIQPNILVVRTELPVSQNTKNKLAQFCDVNPEAVIESR DVETLYSIPLALQAQNMDQIVCDHLKLDAPAADMTEWRALEEKVLNLKKKTKIALVGKYV ELPDAYISVVEALKHAGFDFDSDIEIDWVDSQELTAENVAERIGSADGILVPGGFGDRGI EGKIEAIRFARENDVPFLGICLGMQMACVEFGRNVVGLEDAGSAETNPDVTNNIIDLMAD QENIENLGGTLRLGLYPCKLKKGTKTAAAYGNEDVVQERHRHRYEFNNKYRQLFEENGLV FSGVSPDNRLVEIVEIPEKQFFVACQFHPELISRPNRPQRLIKGFVGAALANKESK >gi|237663596|gb|GG668922.1| GENE 96 93747 - 96083 2407 778 aa, chain - ## HITS:1 COG:SP0369 KEGG:ns NR:ns ## COG: SP0369 COG0744 # Protein_GI_number: 15900292 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Streptococcus pneumoniae TIGR4 # 41 697 17 662 719 624 53.0 1e-178 MPTANSGSRAARHASNTSSKSSYKKKTQPPKKKKRLVLKIFLGLLIAGMVAFLAGVGLFW FYARQAPKLEDDKLNATVSSKLYDINNEIFEDLGAEKRELIQPNDVPQLLKDAIVSVEDR RFYKHIGVDPIRIIGSALSNVKNGGLQGGSTLTQQLIKLSYFSTKESDQTLKRKAQEAWM AVRLEREKSKEEILTYYINKVYMANGFYGMETAAENYYGKHLSELDLPQTALLAGMPQAP NSYDPYTKPDTAKERRDVVLYTMYDNKKISKAEYEKAKATPIDEGLVPLKASDDNRKVVD NYVKEVINEVKAKTGKNVYTDGLDIYTNLDMNAQKQLYDIVNSDQYVAFPDDKMQVASTV IDVASGQVRAQIGGRHIPDDVQLGNNLAVNTQRDVGSTVKPIMDYGPAIENLNYSTGRLM VDKPTKYPGTDIDVFNSDLTYQGVITMRRAIMGSRNTTAVQTFDEVGKENIMPFIKGLGI DYKNLEASNAISSNTSDVDGDKYGISSLKLAAAYAAFANNGIYNKPYYVNKVVFNDGTSV DYQPDGKRAMKDSTAYMMTDMLKDVLNGGTGFNGAIPGLIQAAKTGTSNYTDEDLARMGT TEKGIAPDSTFVGYTTHYAVSVWTGYNDRNTPIYQEYYGIASDVYREIMSYLSQNVSNDD WVQPDSVVRVGNELYVKDAYEVPNVQVLPSTTSSAPQPESSSTVESSSTKEAESSSSSSS ESAPSSSEAPPSTEQPASSSSAEQPATSEQPPEPSSSSSQEPPQPPESSSKPDENKAA >gi|237663596|gb|GG668922.1| GENE 97 96125 - 96742 343 205 aa, chain - ## HITS:1 COG:SPy1648 KEGG:ns NR:ns ## COG: SPy1648 COG3331 # Protein_GI_number: 15675520 # Func_class: R General function prediction only # Function: Penicillin-binding protein-related factor A, putative recombinase # Organism: Streptococcus pyogenes M1 GAS # 9 200 2 191 199 208 55.0 7e-54 MTFHYPNGIPYNHHEAQSPKKQVKKKRPVEFGNRGMDFEEAINQSNQYYLLNKQAVVHKK PTPVQIVKVDYPKRSAAVIKEAYFRQASTTDYNGVYQGRYIDFEAKETKNTKSFPFKNFH QHQIDHMEQCIAQQGICFVLLWFSSLKRCFFFSGENLITHWKNQTVTGKKSMPLALIEKE GIELSFGIAPRIPYLDAVEQYIQTH >gi|237663596|gb|GG668922.1| GENE 98 96805 - 97347 568 180 aa, chain + ## HITS:1 COG:BH1768 KEGG:ns NR:ns ## COG: BH1768 COG4474 # Protein_GI_number: 15614331 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 4 175 1 172 189 153 43.0 2e-37 MEMIKTLYVTGYRSFELGIFQGKDPKITVIKNVLKKELASYIETGVEWILISGNLGVELW TAEVVGELKTEYPEVQLGLLYPFKDFGNNWNEQNRELLTKAESLADYINSVSHQPYQSPA QLKMHTKFLLEHSGGSLLIYDKEYPGKTEYFLKDAQHFSEREPYDIRLITMDDLQNSVID >gi|237663596|gb|GG668922.1| GENE 99 97365 - 97472 59 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLGLYTKFAMFTPHLFIYDRKFHSSTNTIVTKNS >gi|237663596|gb|GG668922.1| GENE 100 97441 - 97851 508 136 aa, chain + ## HITS:1 COG:lin2002 KEGG:ns NR:ns ## COG: lin2002 COG3599 # Protein_GI_number: 16801068 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division initiation protein # Organism: Listeria innocua # 9 106 13 111 113 88 54.0 3e-18 MANLVYSPKDILQKEFKTKMMNGYDPIEVDEFLDNVIKDYEAYNKELLSLQEENSRLMAK LDQLSKAQPTPRVAQEVPKSAAVTNFDILKRLSNLEREVFGKKLDETPSTPVTPSAPSMT TEPANHDVDNAQTRQF >gi|237663596|gb|GG668922.1| GENE 101 97874 - 98053 138 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MISLSTNTTSISACASMDFPQLAKANRDHPKITNLFRRTAKIYTLQQVSAILTNAFCSS >gi|237663596|gb|GG668922.1| GENE 102 98565 - 99728 1343 387 aa, chain + ## HITS:1 COG:lin2000 KEGG:ns NR:ns ## COG: lin2000 COG0116 # Protein_GI_number: 16801066 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Listeria innocua # 5 387 2 382 382 533 68.0 1e-151 MTKEKTFKLVATAASGLEALVGKELRDLGIPCEVENGRAVFEGTVETIATANLWLRTADR IKIVVGEFNAYSFDELFEKVKALPWEDYLPLDAEFPVAGKSIKSKLYSVPDCQAITKKAI VNRLREVYHRPATVPLTETGALFKLEVALLKDKVTLTLDTTGPSLFKRGYRIEKGGAPLK ENMAAALVMLTNWRKDRPFYDPVCGSGTICIEAALIGHNIAPGFNRSFTCETWDWVDPAI FEKVRNEAEAKADYDVELDICGSDVDGRMIEVARANAEEVGLGDSITFKQLALKDFTTEK EYGVMVANPPYGERLGEEESVRRLYKEMGHVFRPLTTWSKYILTSDLAFEEYYGAKATKK RKLYNGALRTDLFQYWGTRPPRKPRED >gi|237663596|gb|GG668922.1| GENE 103 99746 - 101242 1651 498 aa, chain + ## HITS:1 COG:lin1999 KEGG:ns NR:ns ## COG: lin1999 COG2317 # Protein_GI_number: 16801065 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent carboxypeptidase # Organism: Listeria innocua # 3 496 6 499 502 498 49.0 1e-141 MKEAVFLQEVKEIQLLKNALTLLDWDSSTGMPEKSSPFRGEVEGYLTGLYFERSIGPVIQ EALAYFETRPEELSELGKLVFEKVKEEYALNKNVPAERMQEYVKVLNQAHTDWLKARAAQ DFGLLEETLTKVVAFQKEFIPYWQKEEKTPYDVLLNQFEPGMTVEKLDQVFDQVKQGIQE IRTVLAEKGTPPRTDFLSRKMTKEQQRRFVIGVVEQLGYDFSKGRLDDTVHPFMTALNRN DARITTRWEENNFSMATFGVIHEAGHGMYEQNFDPKFDFTPLSEGASMGIHESQSLFNEI IIGSNRAFWQKQYPFFQECAEGTFDDITFEDFYASLKETKASLIRIDSDSLTYPLHIIIR YEIEKMLFNGSLEVADLPKVWNEKYQEYLGVSPENDLEGVLQDVHWSGGSFGYFPSYALG YMYAAQLFHAMKQELSVDEILASEDYSDIRKWLTQHIHQYGASRKPNQLIYDATGEELNP SYLIDYMKAIYFDVYHVQ >gi|237663596|gb|GG668922.1| GENE 104 101275 - 101991 907 238 aa, chain + ## HITS:1 COG:BS_dnaD KEGG:ns NR:ns ## COG: BS_dnaD COG3935 # Protein_GI_number: 16079292 # Func_class: L Replication, recombination and repair # Function: Putative primosome component and related proteins # Organism: Bacillus subtilis # 9 232 11 230 232 124 35.0 2e-28 MLSIREYLEAGETTISNLLFDHYQKIGLKDDEFLFLLQLFRSQNAGDLFPDLMAIAETMG KTPDTIYKLLNQLVSRGFIRIETQQNQKGQMMDTYDLLPVFQKIQLFLQTSKEKQVVANH EDEIKQLYQGFEKEFGRPLSPIELEMIGQWLNTDHYSPELIRLALREAVLNQAYSLKYID RILLAWERKNITTKEQVAADQKKRKDSMIQNEIEQQGQAQESLPKVTLHNWLNPEDSE >gi|237663596|gb|GG668922.1| GENE 105 102006 - 102653 711 215 aa, chain + ## HITS:1 COG:BH1698 KEGG:ns NR:ns ## COG: BH1698 COG0177 # Protein_GI_number: 15614261 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Bacillus halodurans # 1 213 1 213 218 288 64.0 6e-78 MLSKEKTMEAIEIMYEMFPNAECELKHKNPFELLIAVILSAQATDVSVNKATPGLFAAFP TPEALAAAPVEEIIAKIKTIGLYRNKAKNIKACAQQLLERFNGEVPQTRDELVSLPGVGR KTANVVMGDAFGEPAFAVDTHVERVSKRLRICKLNANVTEVEQTLMRKVPKELWVKTHHT MIFFGRYHCLARAPKCEACPLLYMCQEGKERMKGK >gi|237663596|gb|GG668922.1| GENE 106 102827 - 103591 785 254 aa, chain + ## HITS:1 COG:BH3917 KEGG:ns NR:ns ## COG: BH3917 COG2188 # Protein_GI_number: 15616479 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 7 229 26 251 261 122 31.0 5e-28 MTENAPKFKQISAEIEKKIRDGLYVSAQKLPSEYDLAKEYNCSRLTIRKAIDDLIRKNIL VKRHGKGSYVMSQAKIQSGRAGLQGFTEAAKAYGKKSQTEVISFEEVVHPAEKIREALQV GKNEAIYELIRRRMLDGEPMTVEKIYLPQAYVQGHTKQDFEGSLFCLIEKNVEIAYSHQE IEAILVEEEISELLNVPVGQPLLQVHSITYALDATPILYDVSLYRADRYTFKNTLTRYSP SENNQVELGGSWNE >gi|237663596|gb|GG668922.1| GENE 107 103588 - 104886 1342 432 aa, chain + ## HITS:1 COG:CAC2723 KEGG:ns NR:ns ## COG: CAC2723 COG0624 # Protein_GI_number: 15895980 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Clostridium acetobutylicum # 2 429 3 463 465 260 34.0 4e-69 MKIKEEIAAQKDLFYEDLNKIIAIRSVKGSPKKEAPFGEGPKRALEETLKLAERYGFQTE IVNDAVGYAQWGTAEEYLGIIGHLDVVPEGSGWSVPPFQLTKKNQRLYGRGILDNKGPIL ACLYGMKLLKELGYQPKKTIRLMFGTDEESGSGDIPLYLEKENAPVFGFTPDCKYPVVYG ERGIVNYEITTTIPDDSSEQIGHIMGDQAKDHVPDQLSVVIAGKTTAITGKRAPSNAPEL GKNAITLLAQKISEEQLVKGNLLQYFDWLTASFHEKHYGEGVALDFKDQDSGQLILTPYA LEKRGQQLVLSLAVRYPVSITENEVTTQLTKALFPESEVTVIRRLPSTLFPKDERNVQKL TKVYEQITGLDGTPVTTTGATYARFMPNIVAFGPSFPGQKGIAHNQDEYMDEKDLLLNLE IYMQAMIALTEA >gi|237663596|gb|GG668922.1| GENE 108 105056 - 106009 1064 317 aa, chain + ## HITS:1 COG:CC2359 KEGG:ns NR:ns ## COG: CC2359 COG1446 # Protein_GI_number: 16126598 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Caulobacter vibrioides # 4 281 20 313 327 142 33.0 9e-34 MTWGAIATWRMAHDGLLKATEELQQGGAAGTAVEQLIKEVEDYPFYKSVGYGGLPNEEGI LEMDAAYMDGDTFAIGAVAGITDVKNPISVAKALSKEKFNSFRVGAGATKYSMLHGFERK NMLTERANQWWQKRLKEIQENQLNPYDGHDTVGAITLDQTGSMAAGTSSSGLFMKKAGRV GDSPLSGSGFYVDSEIGGAAATGLGEDLMKGCLSYEIVRLMGEGRSPQQACDQAVYAFHE KLTQRYGKAGAFSLVAMNKQGDWGVATNVEFTFTVGTDMQQPEIYIANPGKNHTTEIQPI SQEWLAAYEKRIKAPIE >gi|237663596|gb|GG668922.1| GENE 109 106029 - 106358 532 109 aa, chain + ## HITS:1 COG:CAC0384 KEGG:ns NR:ns ## COG: CAC0384 COG1440 # Protein_GI_number: 15893675 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Clostridium acetobutylicum # 5 104 3 100 102 79 46.0 1e-15 MSKKQIYLFCDAGMSTSIMVNKMMEVVEKHQMPLMITAFPIARAQEVVEAEKPVAILLGP QVRFLLEKTKEQFAPQGIPVAAIAPEIYGMMDGEKALKEALRLIKQNKK >gi|237663596|gb|GG668922.1| GENE 110 106377 - 107732 1465 451 aa, chain + ## HITS:1 COG:BS_licC KEGG:ns NR:ns ## COG: BS_licC COG1455 # Protein_GI_number: 16080909 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Bacillus subtilis # 1 430 1 433 452 340 40.0 5e-93 MQKFLDWLERVLTPLAKVIGENKYLVAIRDGFLLSTPLLIVGSVFLLIANFPLPQWDTWM SHLLGKDWATMMSVPASASFDVMTILAVVGIAYSLGKQFNVDAMQAGIIALVSFFIVTPY QTLFTPENSSKVYEVTSLPLKWMGSSGLFLGMIVALIATRLFVAIVRKGWTIKMPEGVPP TVVKSFEALIPSFLVVTLMFLVNWLAALTSYGNLQDVIFEFLQTPLLSLGNTLGAMSIAY LFLHFFWFFGINGGSVVGAVFNPVLRALSVENLQAFKDGHEIPNIITGQFQDMFATFGGA GSTLSLIIVMVLFCKSQRIKKLSQLSLIPGVFGINEPIIFGLPIVLNPILLIPFVLVPAI NIIIAYFAMDWGLVPLTNGIQLPWTTPPIISGFLVSGWQGSILQALLLVLGMFIYYPFIR VMDDQYLREEWKAQEEESEEIDFDSFDFDDL >gi|237663596|gb|GG668922.1| GENE 111 107750 - 108268 609 172 aa, chain + ## HITS:1 COG:no KEGG:EF1161 NR:ns ## KEGG: EF1161 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 172 1 172 172 324 100.0 1e-87 MKKILLVLNHSLAGFGSDEQAQLKPSGKKAPLGPGVTLLPFLQKQGAEIVATLYCGDQYY LENEEEVAKKFIGFAKKFHADAVLCGPAMHYPNFGEMAARLACKFNAAGIPAIAAMAEEN PAVSHYYQQVPIVKMPKKGGIGLNNSFKQMAQLVVAKANGKETKQLEETSCF >gi|237663596|gb|GG668922.1| GENE 112 108386 - 110767 1974 793 aa, chain + ## HITS:1 COG:lin0195 KEGG:ns NR:ns ## COG: lin0195 COG1199 # Protein_GI_number: 16799272 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Listeria innocua # 6 785 5 779 779 763 47.0 0 MKSTRKIAVRQVVEFILRRGSIDSRHVSEHTPQEGSRLHRMLQKEAGSLYQKEVSLKIEV PLNGHNYCVEGRADGIFVKETGQVVIDEIKTSEPAFEELPPEKVELFWYQVMCYGHMYCQ QEQLSEITLQLTYYQTTTKQITRQERHFTEAALAEFFTDLMKRYEQWVIFKEEWRILRNK SLKNLSFPYGEYRKGQRELAVAVYKTILSKQRLFVEAPTGTGKTMSTLFPAMKAIGEEEG ERIFYLTAKTITRQVAEDAVKALSEKQAQTKSITLTAKDKICFLTERNCTPEHCPFADGY YDRLNEGLWDLLQHENHLTREVIERYAQKHQLCPFELSLDASLWCDLIIGDYNYLFDPTV YLRRFFEEPQSAEENIFLVDETHNLVNRSREMYSAAISRNAVLQIQKRLQKESVQLKRAC QKVLTTFDDIEAICEEKDTDFFAQRAPIDSLVKQIHRLTEVIAEWLPENQHIEELASILS FYFDCLSYLRISEYYDNGFYTSISLRNYDCVVKQFCVDPAYLLSQRLDKGKASILFSASL TPLNYYQEVLGGGEESLRYRIPYPFPEENQLLMIGSHLQTTYKNREKSYPQISELLGKLS ETKTGNYLIFFPSYAYMDDVYQVFSQRYPQVKTQIQGTDLNEKEREAFLAEFKENPQETF IGFCVLGGIFSEGIDLKGTRLIGTIIVSVGLPQMNPEQELIRTFYQEERGQGFQFAYQIP GMNKVLQAAGRVIRDARDKGFVLLLDERFELPSVQRFFPPHWLAYRKAKTNEQLIQQVKQ FWLKNKENKGGNK >gi|237663596|gb|GG668922.1| GENE 113 110764 - 111729 1093 321 aa, chain + ## HITS:1 COG:L142722 KEGG:ns NR:ns ## COG: L142722 COG0252 # Protein_GI_number: 15672718 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Lactococcus lactis # 1 320 2 322 323 358 58.0 6e-99 MKTILVLHTGGTISMSKVAGGSVAPNEKNPLMEQEALFSGKVHLVVEDIFNIPSPHMTLE RMFQLKERIQKAYSEPIDGVVITHGTDTLEETAYFLDITLEKKIPIVLTGAMRSSNEIGS DGLYNFISAIWTACSDESYDKGVLVVMNDEIHTARYVTKTHTTNVATFRTPTFGPIGTIA KERAFFAKEVLPQEVCDVSSVKGNVHVVKAYAGMGERMFELLNTPETDGLVIEALGAGNL PPETLPALQKMLDNGIPVVLVSRCSNGIAEDIYDYAGGGVGLKKMGVVFARGLNGPKARI RLIVGLNSEKNPTELKEFLEQ >gi|237663596|gb|GG668922.1| GENE 114 111751 - 112434 628 227 aa, chain + ## HITS:1 COG:no KEGG:EF1164 NR:ns ## KEGG: EF1164 # Name: not_defined # Def: HD domain-containing protein # Organism: E.faecalis # Pathway: not_defined # 1 227 1 227 227 414 97.0 1e-114 MKLFERIHQDTEIRQIYDAIGQMEDEEAGWAYHNWLHVNNVVAMTKMILKQLAVSEEYLE AAKIAALLHDVGALQGKAGHALRGKQFAEAYFRKQKICLPYQEEILSSIENHSNGFDSEE LMTLALIISDKLDITTSRVAKAGYFVPGMRQLQFLKKIEIMLSEQEVCVSFTAEEELDLE ELNAFYFMPKVFKAIAAFSEKIQRRPIVLLNNQEWPVPKPKNPSTVH >gi|237663596|gb|GG668922.1| GENE 115 112451 - 112945 678 164 aa, chain - ## HITS:1 COG:BS_yitK KEGG:ns NR:ns ## COG: BS_yitK COG1666 # Protein_GI_number: 16078166 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 3 164 2 163 163 171 58.0 4e-43 MAAKEASFDVVSEVNMEEVKNAIQIALKELKNRFDFKGSIADIKLENDKLVVVAEDDYKV EQVKDILFGKLVKRNVPIKNIHFSESEKALGGTARQYGDLISGIDKENAKKINTAIKNSG IKVKSQIQEDKIRVTGKSRDDLQKVMALLRELDLPMALEFNNYR >gi|237663596|gb|GG668922.1| GENE 116 113178 - 114134 990 318 aa, chain + ## HITS:1 COG:lin2365 KEGG:ns NR:ns ## COG: lin2365 COG1284 # Protein_GI_number: 16801428 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 12 293 9 290 300 249 46.0 4e-66 MSRLVSTYQRNESIKKIAVMAITALTSAVGLNFFLIPAKVFSAGMNGIAQIIATLLYTNL GIHINTGIFILFLNIPVFILGFVKLGKQSTILSFINVIGISVVTMFVPIVTVTTNPLMNA IMGGVLVGVGAGLSLKMGFNTGGMDIISLILSKTTGKTVGNFMFLLNGIIVLLAGFVFNW ESALYTIISIYCLSQVVDMIHTSHQKVTAMIVTTRPEAVALEVSQQIARGMTLLPSIGGY SGAEGRMIMMVITRYELYDLEQAVYSIDENAFVNILPTQSVLGRFANEDEQRIFHSTGTF PELQSYKVKRYPPKKKLK >gi|237663596|gb|GG668922.1| GENE 117 114337 - 115206 1358 289 aa, chain + ## HITS:1 COG:SP0605 KEGG:ns NR:ns ## COG: SP0605 COG0191 # Protein_GI_number: 15900513 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Streptococcus pneumoniae TIGR4 # 1 289 1 293 293 388 71.0 1e-108 MPVVSGAEFLKAARKGGYAVGGYNTNNLEWTQAILEAAEAKKAPVLIQTSMGAAKYMGGY KVAKDMITNLVDSMNITVPVAIHLDHGDYEAALECIEVGYTSIMFDGSHLPFEENLKLAK DVVEKAHAKGISVECEVGSIGGEEDGIIGTGELADIEECKQMVATGIDYLACGIGNIHGQ YPENWKGLAFDHLQAIAEAVGSDVPLVLHGGSGIPQEQIEKAISMGISKVNVNTEFQLSF AKATREYIEAGKDLEGKGFDPRKLLAPGKAAIIKDAEEHIDWFGSANKA >gi|237663596|gb|GG668922.1| GENE 118 115380 - 116672 1670 430 aa, chain + ## HITS:1 COG:L113067 KEGG:ns NR:ns ## COG: L113067 COG0766 # Protein_GI_number: 15672294 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Lactococcus lactis # 1 418 1 420 421 544 68.0 1e-154 MKKIVINGNRPLKGEVTISGAKNSVVALIPAAILADSPVTLDGVPDIQDVHSLIEILEIM GAKITFENNTLIIDPTEVVSVPMPKGKINSLRASYYFMGSLLGRFGEGVVGLPGGCYLGP RPIDLHIKGFEALGAHVTNEHGAMYLRTDEAGLQGTRIFMDMVSIGATINVMLAAVKAKG KTIIENAAREPEIIDIATLLNNMGAKVRGAGTDVIRIEGVEELHGCRHSIIPDRIEAGTY LAMAAAMGEGIKVRNVIYEHLESFIAKLQEMGVKMTIEEDMIEVHPSHDLKMTTVKTYPY PGFATDLQQPLTPLLLKAQGTGEIIDTIYAQRNKHIPELVRMGADASVEGNMIILNGPNQ LHGAEVVASDLRAGACLVTAGLMAEGTTTIYNVEYILRGYDHIIEKLTALGADIQMLETE EQEGPFEVDQ >gi|237663596|gb|GG668922.1| GENE 119 116687 - 117961 1089 424 aa, chain + ## HITS:1 COG:BH3781 KEGG:ns NR:ns ## COG: BH3781 COG1158 # Protein_GI_number: 15616343 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Bacillus halodurans # 1 419 5 423 423 609 71.0 1e-174 MAELENSTLKDIYAYAKEFKIPYYSQMNKKELSLAVIRAQAEKQGFFFMEGILDIVSQDG YGFLRPINYGPSAEDIYISSSQIRRFGLRNGDKVAGKARPPKESERYYGLMHVESVNGKD PEEAKERPHFPALTPLYPEKQLTLETTAGRLSTRMIDVFAPIGFGQRGLIVAPPKAGKTS VLKEIANGITENHPDVELILLLIDERPEEVTDLERSVKGDVVSSTFDQQPQNHTRVAELV LDRAMRLVEDKRDVVILMDSITRLARAYNLVVPPSGRTLSGGIDPAAFFKPKRFFGAARN IEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLSRELAERRIFPAIDIKKSSTR KEELLMTPEQLEETWKLRNNMSGDSLEYTDQFIKMLKRTQNNQQLFEVFHDVSFGKQIKR NPKR >gi|237663596|gb|GG668922.1| GENE 120 118031 - 118330 532 99 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227518426|ref|ZP_03948475.1| ribosomal protein L31 [Enterococcus faecalis TX0104] # 1 99 1 99 99 209 100 2e-52 MDQGKGAKKRMKQDIHPNYQPVVFMDSTTGFKFLSGSTKGSSETVEWEDGNTYPLLRVEV TSDSHPFYTGRQKFTQADGRVDRFNKKYGLKDENANPDA >gi|237663596|gb|GG668922.1| GENE 121 118599 - 118817 104 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIDNFLYKVLLSFRDSVVLIVQLNVHHFLGNSLCTQFLLFYVCMVSVLILLSTIVLALLY PFTTNSFLIKKI >gi|237663596|gb|GG668922.1| GENE 122 118721 - 119758 509 345 aa, chain + ## HITS:1 COG:lin1075 KEGG:ns NR:ns ## COG: lin1075 COG1887 # Protein_GI_number: 16800144 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC # Organism: Listeria innocua # 60 339 89 381 383 140 34.0 5e-33 MSFPRNDGHLIEQLEQHYHGMIIVLYTKNCQSYAASLNQKGIKTILFDKKTLLITTAISY LKSAPLIFVDNYFPELAILKNEQVVIQLWHANGALKQFGWGAYHTNQRSRKDQIRFQKVY DKMNYFVVNSLKMEAIFRNNYRLENAQFCHFGSPRLAYLEKLEIGETNQNNKILYAPTYR EELNEMMLVINQAIKAFSAMPKFHFYMKLHPSIQLDAIELPRNVSIWEKHIFESFSEIDY LITDYSSVVFEYMHVKEQPNILFFCPDLEKYALNPGIEPDFFEYLPGPLVENEKQLIVAL SNFSINSYKDNIARINEEWNQYQSKESINKIVELVERILGGFCEK >gi|237663596|gb|GG668922.1| GENE 123 119748 - 120494 448 248 aa, chain + ## HITS:1 COG:BS_tagA KEGG:ns NR:ns ## COG: BS_tagA COG1922 # Protein_GI_number: 16080628 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Teichoic acid biosynthesis proteins # Organism: Bacillus subtilis # 5 244 1 241 256 159 38.0 5e-39 MKSKVRTEYIGGLPVDVLTHQEIMDDLESYLKAKEKMIVTSVNPQISLLAFEYPEVKLYL KRATHRIADGIGVVKASKLTGGSIRERVTGIDVMDNFLEYANQHKERIFLYGAKQEVVEA AAKNIQQQYPGIVISGILHGYTKKKQQEIVEQINKAEPRFVFVALGSPKQEIFLEQTIDH LTANVFLDVGGTFDVLAGSVKRAPEFYINHNLEWLYRCLTMKRYDRLMQIPKYIYLTIKY RNNKSRGQ >gi|237663596|gb|GG668922.1| GENE 124 120495 - 121088 326 197 aa, chain + ## HITS:1 COG:no KEGG:EF1174 NR:ns ## KEGG: EF1174 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 197 1 197 197 304 95.0 2e-81 MIILFIWENDVDTTFYIVKIGKDEKFILRVPPIHKLSEFVQNNQWNSLIEELRRLSSYEV NEYIIIKKAMLFSYLFEDDKEIVISNQSERHLIDQNGKEWFLPKGKVAVNQEVLAEYLRF SHSDSERSFEHQEHIFRLTKIKLLKDKNPLKLQKQLKQLKKATTTSFSIKSLSKLLVIYT ATENKKFDRKTIKVNQK >gi|237663596|gb|GG668922.1| GENE 125 121153 - 121551 389 132 aa, chain + ## HITS:1 COG:BS_tagD KEGG:ns NR:ns ## COG: BS_tagD COG0615 # Protein_GI_number: 16080627 # Func_class: M Cell wall/membrane/envelope biogenesis; I Lipid transport and metabolism # Function: Cytidylyltransferase # Organism: Bacillus subtilis # 1 128 1 126 129 157 62.0 3e-39 MKKILTYGTFDLLHYGHINLLKKAKQQGDYLIVGLSTDAFNLEKKKQSYFSYEKRKQLLE AIRYVDLVIPETSWKQKVSDIAEFKIDTLVMGDDWQGAFDFLEVETTAKVLYLPRTPEVS TTQIKKELYYNE >gi|237663596|gb|GG668922.1| GENE 126 121692 - 122753 740 353 aa, chain + ## HITS:1 COG:no KEGG:EF1176 NR:ns ## KEGG: EF1176 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 353 1 354 354 627 98.0 1e-178 MSRKKVGVFCLFLFFTFFIIVPKVEATEEMKTKFTVTPVLPENQVSGTSSYYDLILAPKQ SSTIVLDIKNKTDEKLSIVLTLANASTNDNGLIVYNDFDKPLDSSLKVPLTDLVTLENEE VSVPPHQTVSAKMKVKGLDQPIKGVVLGGVYAHLKDEKEEETQTTGLTSRYGFNVAIAMR SAENAPLTEVNQLKLTKVTPTIALGAKSLKAVIQNPYAAIFPEVRLEGQVIKKGSSKKIA QRTLKNVRFAPNSSMNFHLDLGKQPLDAGTYIFTGRAILQQDEQQSWPFQQEFTINTREA KKLNQEATVKWVLPTWWLPTFYTLLVITIGAICSVIWRNNYQKTSEKESENNG >gi|237663596|gb|GG668922.1| GENE 127 122746 - 122958 258 70 aa, chain + ## HITS:1 COG:no KEGG:EF1177 NR:ns ## KEGG: EF1177 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 70 1 70 70 90 98.0 2e-17 MASWFWLSGGLAVICFMFFLFSLLTSMSFIQHAKEPRSILKETLLSWLMLLLSGGWIAIG LLLYFSLKNQ >gi|237663596|gb|GG668922.1| GENE 128 123185 - 124063 1102 292 aa, chain + ## HITS:1 COG:CAC1523 KEGG:ns NR:ns ## COG: CAC1523 COG1940 # Protein_GI_number: 15894801 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Clostridium acetobutylicum # 5 284 2 281 288 342 56.0 5e-94 MTEKLLGSIEAGGTKFVCGVGTDDLTIVERVSFPTTTPEETMKKVIEFFQQYPLKAIGIG SFGPIDIHVDSPTYGYITSTPKLAWRNFDLLGTMKQHFDVPMAWTTDVNAAAYGEYVAGN GQHTSSCVYYTIGTGVGAGAIQNGEFIEGFSHPEMGHALVRRHPEDTYAGNCPYHGDCLE GIAAGPAVEGRSGKKGHLLEEDHKTWELEAYYLAQAAYNTTLLLAPEVIILGGGVMKQRH LMPKVREKFAELVNGYVETPPLEKYLVTPLLEDNPGTIGCFALAKKALMAQK >gi|237663596|gb|GG668922.1| GENE 129 124154 - 124402 486 82 aa, chain + ## HITS:1 COG:no KEGG:EF1180 NR:ns ## KEGG: EF1180 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 82 1 82 82 88 100.0 8e-17 MADLKGRFDDAKDKVEGTAKEAQGKVTDDKGKELEGKAQSTFADVKDKARDAGDDLKEGA EKLTDKVKEGFEDLKDKFSKDK >gi|237663596|gb|GG668922.1| GENE 130 124460 - 125194 785 244 aa, chain - ## HITS:1 COG:lin0323 KEGG:ns NR:ns ## COG: lin0323 COG0778 # Protein_GI_number: 16799400 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Listeria innocua # 1 242 1 242 245 270 54.0 2e-72 MNQTIEQLLSHRSVRHFKKQALTDKQKQQLITAAQAGSSSNFLQAYTIIEIKDLELRREL GRLANCEDYVVNTGVFYVFVADLYRHATILSKEGQSLEPLKTPESLLVAAVDTTIAAQNM AIAAESMDLGICYIGGIRNDLDTVAKRLSLPELTVPLFGLTIGVPETLNGVKPRMPFENI LSENHYQSDKLTDMHAYDELLKDYYASRSSNAQTADWSQKSLSYFSYNRRPEVKTFLQKQ GFDV >gi|237663596|gb|GG668922.1| GENE 131 125278 - 125736 729 152 aa, chain - ## HITS:1 COG:SP0340 KEGG:ns NR:ns ## COG: SP0340 COG1854 # Protein_GI_number: 15900270 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Streptococcus pneumoniae TIGR4 # 4 150 7 157 160 177 55.0 4e-45 MARVESFELDHNTVKAPYVRLAGTEQNGDALVEKYDLRFLQPNKDALPTGALHTLEHLLA VNMRDELKGIIDISPMGCRTGFYMIMWDQHSPQEIRDALVNVLNKVINTEVVPAVSAKEC GNYKDHSLFAAKEYAKIVLDQGISLDPFERIL >gi|237663596|gb|GG668922.1| GENE 132 125943 - 127010 1163 355 aa, chain + ## HITS:1 COG:L66199 KEGG:ns NR:ns ## COG: L66199 COG0136 # Protein_GI_number: 15673604 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Lactococcus lactis # 4 350 3 348 358 469 67.0 1e-132 MGKEYHVAVVGATGAVGTRMIELLAETSLPIASVRLLASKRSAGQEIQFKGQPLIVEELV PESFEGIDLALFSAGGGISEKFAPEAVKRGAVVVDNTSHFRMAKDVPLVVPEVNPEALKN HQGIIANPNCSTIQMMVALEPIRQAFGLERIIVSTYQAVSGAGIRAINELKEQAEDFLEG KPVSEWSAEILPASSDKKHYPIAFNALPQIDVFSEAGYTYEEWKMMNETKKIMGDNKLKV VATCVRIPVISGHSESVYIEVKQADASVSAIQELMAQAPGVILQDEPSEQLYPQALNSVN QKETFVGRIRQDVDVKNGFHLWIVSDNLLKGAAWNSVQIAETLHEMNLLRVPEND >gi|237663596|gb|GG668922.1| GENE 133 127044 - 127916 913 290 aa, chain + ## HITS:1 COG:L0093 KEGG:ns NR:ns ## COG: L0093 COG0329 # Protein_GI_number: 15673602 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Lactococcus lactis # 3 288 10 295 297 378 65.0 1e-105 MDLTNATIITAMVTPFQESGEIDFDKLPQLVDYLLANHTEGVILAGTTGESPTLTHEEEL QLFQRIIELIDGRIPIICGVGTNDTRDSVAFVKELATIAGIDAVLAVVPYYNKPNQEGMY QHFKTIAEASELPIILYNVPGRTAACLEVETTLRLAQLEKIVAIKECAGLDAITELIERA PKDFLVYTGEDGLAFATKALGGQGVISVASHVFGSSMYEMYQALDQGNLPEAAKIQRQLL PKMNALFSVPSPAPVKAALNHLGIPVGNLRLPLVACTPEEEQRIIRTLEI >gi|237663596|gb|GG668922.1| GENE 134 127947 - 129635 1772 562 aa, chain + ## HITS:1 COG:SP0613 KEGG:ns NR:ns ## COG: SP0613 COG0595 # Protein_GI_number: 15900521 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Streptococcus pneumoniae TIGR4 # 1 552 1 552 553 696 60.0 0 MSTIKIVPLGGVRENGKNMYVAEVEDEIFVLDCGLQYPENELLGIDVVIPDFTYLEENSE RIAGVFLTHGHADAIGALPYLLSKIQVPVFGTELTIELAKLSVNSHAETKKFKDFHVIDP HTEIDFGQATVSFFKTTHTIPDSIGVSIKTKEGNIVYTGDFKFDQSAIEMYQTDYGRLAE IGKEGVLALLSDSSNAENPAQVASEAQIADEVFDTIRYWEGRIIVACVASNLQRVQQVLN AADRSGRKVVLTGQDFERIIRTAMKLEKLQLPSEDLLVKPKEMKKYAPEQLLILETGRMG EPIKSLQKMANNTHGVVRIEEGDLVYITTTPTTAMETTVAKTEDIVYRAGATVKQISDNL RVSGHANPNDLQLMLNLMKPKYFIPVQGEYRQLAAHADLAHEIGMPYKDIFITGRGDILE YTKGKMSVAGSTTAENIMIDGIGVGDIGNIVLRDRRILSEDGIFVAVVTINRREKRIVSP AKITSRGFVYVKTSKDLMKESSNIVTEIVEKHLESDDFEWSKLKQEIRENLSRYLFEQTK RRPVILPVIMEATQRKRPKNNA >gi|237663596|gb|GG668922.1| GENE 135 129760 - 131142 1314 460 aa, chain + ## HITS:1 COG:lin2502 KEGG:ns NR:ns ## COG: lin2502 COG0737 # Protein_GI_number: 16801564 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Listeria innocua # 1 457 2 457 463 306 35.0 4e-83 MEEIVLFHTNDLHSHFENWPKIRRLVKAKRSLYQKEGKTVVTIDLGDFSDRCHPLTEATD GRANVAIMNTLAYDLVTIGNNEGIGNSKKQLEHLYDQATFEVVLANLEDPKTQTLPDFCQ AYKIMTTKEGTKLGFIGLTAPFPLTYNPNGWTIKQVETVLPQLITEVAPQCDVLILLSHL GIDTDFMIAANYPEIQVILGSHTHHLFKDGEKINHVQLAAAGKYGQYMGEVHLFVDADTK QVTSYAKTIETASLEEQATDAKEIAGYLTEGHRLLQAQQIAQIPETLSTDLRQPYAFITV ALKALKEAGQTEAAVLNNGLFLADLPEGIINADQLHEALPHPMHLIKVTLKGSDMSRLIR EMEKSRQFLRKFPIRGMGFRGKIFGELCYDGIRFERNSQTVFWQGKPIQPEQKYTLTTVD HFQFVPFFPTIELVGEVEFLFPDVLRTVVANYLHAHYPIK >gi|237663596|gb|GG668922.1| GENE 136 131177 - 131818 845 213 aa, chain + ## HITS:1 COG:lin2501 KEGG:ns NR:ns ## COG: lin2501 COG4470 # Protein_GI_number: 16801563 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 55 141 3 89 91 127 65.0 1e-29 MTDKKTTEKKETETETETAATFTEELTAVLEEIKEEPVKEKKKGEIVTIVNETDIQIGER EYRIVKNHRDAFDPERLGERFSEVLARYDYIVGDWGYEQLRLRGFFDTSNRRAAPDQRID TLEDYLYEYCNFGCAYFVIERTGERKEKTTHRRRRHKKNNRSNAFVEEKSAPANKNSKPV IRTRKEENKKTTTPKQPSPKKSGKGFTIRQREE >gi|237663596|gb|GG668922.1| GENE 137 131824 - 132594 1062 256 aa, chain + ## HITS:1 COG:SP1407 KEGG:ns NR:ns ## COG: SP1407 COG0647 # Protein_GI_number: 15901261 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Streptococcus pneumoniae TIGR4 # 5 256 3 254 257 318 64.0 8e-87 MKKDYQGYLIDLDGTIYLGKEPIPAGKRFVEQLQEKDLPFLFVTNNTTKSPETVAQRLAN EFDIHVPASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVV GLDTELSYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVY IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTL PTPPTYVVDSLDEWTF >gi|237663596|gb|GG668922.1| GENE 138 132597 - 133235 473 212 aa, chain + ## HITS:1 COG:SPy1044 KEGG:ns NR:ns ## COG: SPy1044 COG4478 # Protein_GI_number: 15675040 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 10 196 3 192 210 100 36.0 1e-21 MMRSKLRLRETLGLICLFLTIVALSITITINFRPLYLFDIQHLNILKDVEVDRVTLIKNY DHLMMYLNNPFEKTLVFPDFPMSDSAAFHFYEVKKLFLLCYGVLLVTLLPSVLYLKYLVK NQRLWTLIRPFQWGMFLPVLFGFFMLIGFDQFFIAFHGLFFNNDAWLFNPLTDPIINALP EAYFMHCFILFFVLLEGLFLIGILIGKRSLKK >gi|237663596|gb|GG668922.1| GENE 139 133362 - 133931 708 189 aa, chain + ## HITS:1 COG:no KEGG:EF1190 NR:ns ## KEGG: EF1190 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 189 1 189 189 329 99.0 4e-89 MDEIEKSLQDWGQQLENVHLPRWHELPDIELYMDQVITLIEKYLSPLITLEKHTLLTSSM VNNYVKHGLIPAPVKKRYNQKHLAFLIAITLLKQVLTLPEIKQGILFQGATVGIREAYNL FCQEQERAIYVIAAQAQEKEVQAKSQEPMGIEYLAVKAATMSFATKMFSEKVIELEQEYL KEMDEMTHE >gi|237663596|gb|GG668922.1| GENE 140 133924 - 134784 1207 286 aa, chain + ## HITS:1 COG:CAC1624 KEGG:ns NR:ns ## COG: CAC1624 COG1307 # Protein_GI_number: 15894902 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 4 281 2 277 280 214 41.0 2e-55 MNKEKIALLVDSGTDVPEALVKQYGMYVLPLQIIYPEKTYTDKVDITPEEVYQRLEKEIP STSLPDGATIQAIFDKIKEAGYEKVLAVTISSGLSGTYNVVRLLGEQTEGLDVFVLDTKN IGIGAGIQAIRAAELIETGLGWQELQQKLTEEVANAKVFFNVATLEYLQKGGRIGLVTSI LGNALKLNPIISCNEEGIYYTVAKSRGRKKSLDKTFELVTNFIGEAPRFRLAVAHGAAEE EAKAMMERLKAAFPQAEEIYFGTISPALVVHTGPGLLGVGIQLLND >gi|237663596|gb|GG668922.1| GENE 141 134938 - 135603 914 221 aa, chain + ## HITS:1 COG:SP1778 KEGG:ns NR:ns ## COG: SP1778 COG0580 # Protein_GI_number: 15901607 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Streptococcus pneumoniae TIGR4 # 1 221 1 222 222 194 58.0 1e-49 MKKAIAECLGTFILVFFGTGTAVLGNGMEGIGTTGIALAFGLTIVAAAYSIGTISGAHLN PAVSLGMWLNKRITTMELIYYVVGQIVGGLIASFALLSILKGAGKSIENLGQNGVGELSV AGALTVEIILTFIFVLVVMTVTSAKKGNASLAGIVIGLTLTMIHLVGIPLTGTSVNPARS IAPAVFAGGSALSELWIFIVAPLIGGLLAALVAKFVLDTEE >gi|237663596|gb|GG668922.1| GENE 142 135777 - 136481 1065 234 aa, chain + ## HITS:1 COG:lin0315 KEGG:ns NR:ns ## COG: lin0315 COG0745 # Protein_GI_number: 16799392 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Listeria innocua # 2 234 4 237 237 357 81.0 1e-98 MKKILVVDDEKPISEIVKYNLVKEGYEVFTAYDGEEALEKVEEVEPDLIILDLMLPKMDG LEVAREVRKTHDMPIIMVTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRGA TNAKEAEVTTQSELTIGDLTIHPDAYMVSKRGEKIELTHREFELLYYLAKHIGQVMTREH LLQTVWGYDYFGDVRTVDVTVRRLREKIEDSPSHPTYLVTRRGVGYYLRNPEQE >gi|237663596|gb|GG668922.1| GENE 143 136488 - 138317 1921 609 aa, chain + ## HITS:1 COG:lin0316 KEGG:ns NR:ns ## COG: lin0316 COG5002 # Protein_GI_number: 16799393 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 4 609 3 610 610 526 46.0 1e-149 MKKKVHFFQSVNFKIALSFILLLLIAIQIIGGYFIRELEATTISDFKKNMDSQVVQLSNT LSTQMSNKDLERSDVDANLKKALSDFSNADISEARIVDDKGIIRATNDLNQQNIIGKKND YRDLNDFTSKKYQALDNDKRVYVNVQPIQSPTGETVIGVLYVKSNLENKYQEITNTASIF FTASIIAAAISIIVTLLIARSITKPIGEMREQAIRIARGDYAGKVEVHGKDELGQLAETF NQLSERIEEAQETMEAERNRLDSVLTHMTDGVIATDRRGKVITINEMALSLLNVKNENVI GTSLLELLDIEEDYTLRKLLEEPDELLIDRSTSDREEDQMIIRVDFTMIRRESGFITGLV CVLHDVTEQEKNERERREFVSNVSHELRTPLTSMRSYIEALSEGAWENPEIAPNFLKVTL EETDRMIRMINDLLNLSRMDSGNTHLQLEYVNFNELINFVLDRFDMMIENEQKNYKIRRE FTKRDLWVELDTDKVIQVLDNILNNAIKYSPDGGVITCRLVETHNNVVFSISDQGLGIPK KDLGKVFERFYRVDKARARAQGGTGLGLAISKEVIRAHNGSIWVESTEGEGSTFYISLPY EPYEEDWWE >gi|237663596|gb|GG668922.1| GENE 144 138317 - 139624 1058 435 aa, chain + ## HITS:1 COG:lin0317 KEGG:ns NR:ns ## COG: lin0317 COG4863 # Protein_GI_number: 16799394 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 12 420 12 429 440 62 21.0 1e-09 MKLSEWITRIGLILMVILSIYFSVNIWLNSAKKIPEMKSGSQVTTAVNEKAIGDVYLPLQ LIRITDGKAMQSNRETLISNVQNDIKMATFGKLTQVVTKNAEQLKRYNQMDQGIELLYQG PFLISDYASIYNLSINFTNFNELTDQYFTKIQLDFNENKIRFLDYDQANVYEAPMTVNKA RLLGIINKEGLQYQDVSENTLTKQGQCYLTNDMKLKKYSYILASQPVTRFRNAFFNETED IQTNEDSQDLTYTSKEERLFAEEKLGKIDFKGTLPEENKRDSIYNQSFSYVKRLGTNMGN LRYFDRTKDSVNYRTFVEGFPVFSNDLKGQVDIRITNNDGAAPSVTINTSVNTIQVPIPS EEEVTLESTEKLIKRLETAGAKKEKIQSAVIGYTWQTIEEVKQVVDLSPEWYVLYNNNWY TATDLVKQLPSLEVG >gi|237663596|gb|GG668922.1| GENE 145 139624 - 140478 705 284 aa, chain + ## HITS:1 COG:no KEGG:EF1196 NR:ns ## KEGG: EF1196 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 284 1 284 284 525 100.0 1e-148 MDFKRIEWIFFLAFLGLNIFLFGIYREGQQEESNVSSSSQTESIESRLEKDNISYKGTLS SERLEGYYLSGEQTNFSAALKIQREKNKNFLRNGLQIADNTLTSVPSKNYFIDPKKIDKD LSTFLNEKNALLFGDEYQYLPEFSHLKEPTAEIVAAQSYKGIPFRDDTAKLSILADTSGE LWKISKYSQTHIENIEELRDKTDLYSNRDAIDTLYMNNRIPSNSKITFIKLAYSRIYKIR EKNVYVPVWFVGISTGEDSVEIEQVNAVSNTIITNNTVPKVEKH >gi|237663596|gb|GG668922.1| GENE 146 140535 - 141341 882 268 aa, chain + ## HITS:1 COG:SP1225 KEGG:ns NR:ns ## COG: SP1225 COG1235 # Protein_GI_number: 15901087 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Streptococcus pneumoniae TIGR4 # 3 268 2 269 269 377 69.0 1e-104 MDSEFAFNISVLASGSTGNSLFIETNQKKVLVDAGLSGKKITSLLAEVNRKPEDLDAILV THEHRDHIHGVGVLARKYKLDVYANEKTWQAMDPMIGKVDVAQKHIFEMGKVLTLGDMDI ESFGVSHDAIAPQFYRFHRNNRSFVVLTDTGYCSDHIRGTIENADAYLVESNHEIEILRA GPYPWSLKQRILGDKGHLSNDDGALVMADVLGDKTKRIYLGHLSKENNTKLHARMAMEST LKQKDLGVGEAFKVYDTDPDSASELFQI >gi|237663596|gb|GG668922.1| GENE 147 141552 - 142466 913 304 aa, chain + ## HITS:1 COG:SPy0576 KEGG:ns NR:ns ## COG: SPy0576 COG0701 # Protein_GI_number: 15674665 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Streptococcus pyogenes M1 GAS # 1 304 3 297 300 290 53.0 4e-78 MFQFLPNSVLQMSTIFLSIIIEALPFVMLGCLISGALHVFLTPERVKKVLPKNKFLSICV GSFLGFFFPSCECGIVPIVHQFVKKDVPTHTAFAFMLTAPIINPIVLFSTYVAFSGATKF VIWRVLGSMIVAWVIGIWLAYFRKESILTEKELAQIKEEQVAHTHEHVDEARSFWKNGWS ALTHSIDEFFDTGRYLIFGSLLAAIMQTYIPTGALMQLGHSKILAILVMLVIAATLSLCS EADAFIGSSLLSLFGTGPIVAFLVFGPMVDIKNLLMMKRYFKMSFIVQFVLIVALVVTIY AAVV >gi|237663596|gb|GG668922.1| GENE 148 142485 - 143351 865 288 aa, chain + ## HITS:1 COG:lin0922 KEGG:ns NR:ns ## COG: lin0922 COG3689 # Protein_GI_number: 16799993 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 1 288 1 279 279 267 48.0 1e-71 MIRFIILIGYMGLMMYLQISGELNQYINIHYNYLAVLSMVLAFIMAIVQLILWNQADPSM QKKHEDMHHHGGHEHHGHQHNLEKPSQRGLAYLLLSLPLIVGLLFPTVSLDTTIVEAKGF NFPVSKESVGDPDMQTQYLKPDTSMYFNKTDYDKQMAKAMKQYDGQSVISITDENYLEIM ELIYNYPSQFAGKRISYKGFVYNSKREESVDQFVFRFGIIHCVADSGVFGLLVHFPEHTQ FQNNDWVTITGTVELSYYPPFKRQIPTVQVEKVKADQAPKNQYVYRSF >gi|237663596|gb|GG668922.1| GENE 149 143403 - 143894 447 163 aa, chain - ## HITS:1 COG:lin0586 KEGG:ns NR:ns ## COG: lin0586 COG3610 # Protein_GI_number: 16799661 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 5 151 7 152 152 157 55.0 7e-39 MLGIVLVQFIFSFLASAAFAIIINVPRRSLVACGLTGSVSWMLYWVIVEVFSGNAALGSL IGAVGVAAVSYLFSKILKMPVTIFNIPGIVPLVPGGLAYQAVRNIVIGNYEKGAYFTVQA VMIAGAIALGLVASEVFNQNIRSFREKRESLGFIRRKRNKIKK >gi|237663596|gb|GG668922.1| GENE 150 143909 - 144661 719 250 aa, chain - ## HITS:1 COG:lin0587 KEGG:ns NR:ns ## COG: lin0587 COG2966 # Protein_GI_number: 16799662 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 249 1 249 250 241 52.0 1e-63 MTPAHLDLLLETCLLAGKIMIESDAEMYRVEDTMSRIALASGNYRMVSYVTQTGLFVGID GTSTIRMVQVMKRGIDLEKISRVNQLSRAYVAGDFSLEELLNKLKVIDSEHRHFPISARI VSAAVVSATIMILFGGVWSDLFLTFLIGGCGYSLYYFSLKFLKIKFLSEFLASLFIGAAA ILSVKLGLGQSQDLIIIGCVMPLVPGVQITNALRDLLAGHYLSGVSRGTEALMTSGMIGF GIAFVFQLFY >gi|237663596|gb|GG668922.1| GENE 151 145097 - 145366 484 89 aa, chain + ## HITS:1 COG:SPy2114 KEGG:ns NR:ns ## COG: SPy2114 COG4472 # Protein_GI_number: 15675864 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 89 1 89 89 128 73.0 2e-30 MGFTDETVRFDFDDNRKKAISETLETVYRALEEKGYNPINQIVGYLLSGDPAYIPRYQDA RNLIRRHERDEIMEELTKYYLANHGIDIK >gi|237663596|gb|GG668922.1| GENE 152 145372 - 145785 415 137 aa, chain + ## HITS:1 COG:SPy2113 KEGG:ns NR:ns ## COG: SPy2113 COG0816 # Protein_GI_number: 15675863 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Streptococcus pyogenes M1 GAS # 1 133 4 136 139 191 71.0 3e-49 MGLDVGSRTVGVAVSDLLGWTAQGIEIIRINEEEENFGFERLGELVKEYEVTKFVVGLPK NMNNSIGPRAEASMAYGDKIQELFQLPVDYQDERLTTVQAERFLVEQADASRAKRKKVID KLAAVMILQNYLDAHSR >gi|237663596|gb|GG668922.1| GENE 153 145823 - 146128 518 101 aa, chain + ## HITS:1 COG:SPy2112 KEGG:ns NR:ns ## COG: SPy2112 COG3906 # Protein_GI_number: 15675862 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 4 98 3 100 101 96 71.0 1e-20 MTEHNHDHDHEGHEHITLVDEQGNETLYEILLTVDGQEEFGKNYVLLYPAGIPEDEDVEL QAYSYVENAEGTEGDLQQIETDAEWDMIEEVFNTFMAEEEE >gi|237663596|gb|GG668922.1| GENE 154 146466 - 146528 228 20 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFDLLALLTGISVRGNAPHQ >gi|237663596|gb|GG668922.1| GENE 155 146628 - 147476 979 282 aa, chain + ## HITS:1 COG:no KEGG:MPTP_1291 NR:ns ## KEGG: MPTP_1291 # Name: not_defined # Def: Cro/CI family transcriptional regulator # Organism: M.plutonius # Pathway: not_defined # 1 281 1 281 281 426 81.0 1e-118 MRVAGEKIKTARKKKKLSQAELAKGICTQATISNIENKNVCDSLDIFSSVCLRLDLQVEE CIEGSSEKKLESLLNKVEELCFYFKHDEAYDLLKDYPDDIESSNRILETKFFYYKGITSL LGKKNNSEALFYLHRGSEISRDINIYNILSMNAIGILYELEDDIEKAKVYYDKSLQLLSE FKLDYPLEQCRIYYNTAKFYSLIKDYAKSIELSDKGIEINRTHSSIYSLDCLLYEKAFNK QMLGLDAVEDYRIAYYFTRFFENKKLLAYIEKDMQEFNISFK >gi|237663596|gb|GG668922.1| GENE 156 147550 - 148719 1437 389 aa, chain - ## HITS:1 COG:SPy1110 KEGG:ns NR:ns ## COG: SPy1110 COG0281 # Protein_GI_number: 15675092 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Streptococcus pyogenes M1 GAS # 8 385 7 385 388 549 75.0 1e-156 MSTKDVKELAIEQAKKFGGKLEVCPKVPIETKADLGIAYTPGVAAVSSAIHEKKERAYEL TTKKNTVAVISDGSAVLGLGNIGPEAAMPVMEGKAALFKRFAGVDSIPLVLDTQDTEEII QTVKFLAPTFGGINLEDISAPRCFEIEQRLIDELDIPVFHDDQHGTAIVVLAALYNSLKL INKKIEDIHVVINGGGSAGLSITRKFLAAGVKHIIIVDRTGILSETDTALPPHHAEIAKL TNREHRTGDLATALEGADVFVGVSAPGVLKPQWIQQMNEQPVIFAMANPVPEIFPDEALA AGAYIVGTGRSDFPNQINNVLAFPGIFRGALDARAKKITIEMQIAAAKGIAKLIPDNELT PTNIIPDPFQEGVAKVVAESVRNAVKETN >gi|237663596|gb|GG668922.1| GENE 157 148751 - 150076 1444 441 aa, chain - ## HITS:1 COG:SPy1109 KEGG:ns NR:ns ## COG: SPy1109 COG3493 # Protein_GI_number: 15675091 # Func_class: C Energy production and conversion # Function: Na+/citrate symporter # Organism: Streptococcus pyogenes M1 GAS # 15 441 20 442 443 616 79.0 1e-176 MEKKLHATAANETDWRNKLTKTRIGSVTLPVYLVTASIILVTALLEQLPVNMLGGFAVIL TMGWLLGTIGGNIPILKHFGGPAILSLLVPSIMVFFNLLNQNVLDSTDILMKQANFLYFY IACLVCGSILGMNRKILVQGLMRMIVPMALGMILAMGVGTLVGTLLGLGWKHSLFYIVTP VLAGGIGEGILPLSLGYSAITGLPSEQLVGQLIPATIIGNFFAIMCSGLLSRLGEKRPEL SGQGQLIKITNSDDLSDALEEDKAPIDVKLMGAGVLIACTLFITGGLLQHLTGFPGPVLM IVVAAFLKYLNVVPKETQRGSKQLYKFISGNFTFPLMVGLGMLYIPLKDVVGMLSWQYFV VVISVVFTVIATGFFVSRFMNMNPVEAAIVSACQSGMGGTGDVAILSTANRMNLMPFAQV ATRLGGAITVITMTAIFRMLF >gi|237663596|gb|GG668922.1| GENE 158 150224 - 151774 1566 516 aa, chain + ## HITS:1 COG:SPy1107 KEGG:ns NR:ns ## COG: SPy1107 COG3290 # Protein_GI_number: 15675090 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Streptococcus pyogenes M1 GAS # 1 509 1 507 513 328 36.0 2e-89 MKRGGKLWCFLSVIFIATLIIMITFFYGVTTVQTIKEVRKNQEQALLAVGEQLAIEPNVI EALKNDHYSDELEAYTVRLGEIHQLDFIVIMNMQGIRLTHPDHQKIGKHFEGGDEVRALK GEEHLSVSQGSLGESLRGFVPVYDQGKQIGVVAMGIKMTSLSQLIERTKNDYTVSVLLSV GFGFILAIVVSYYLKKQLHDLEPREIARLLEERNAMLEETKDAILVIDTDQNILLANIEA TKMYHNITNSEENLLGKKLSALVLSPEKLVVHSKTEQFYRQNGQDYFVSIAPINVRKKTI GHVIFLKNATETFVVAEQLVSTTTYASALQSQSHEFMNKMHVIYGLVDLEDYEALKHYLA DLLKPEKEFAQRLAILVRNPILAGFLSGERIKFAEIKTQLAIEIYPEIPPNKRDEDTQNL IAIYRYIHRFLMEQPLPEEIIETIDYQPGSLTTTYSFAYPKEQLERFEQEFFTSYLARLL ENAEATLTWENQQNNWLVLRINVHYEGAEENEPIDY >gi|237663596|gb|GG668922.1| GENE 159 151755 - 152447 468 230 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 1 229 1 223 226 184 44 5e-45 MNLLIIEDDPMVAYIHQKYLEKLIHQPTIFTVATIAEGLQLTKEKQPALVLLDVHLKDGN GLTYLATIRDEKIDTEVILITAANELENVKRSLHLGVLDYLVKPFSFERFQQSIENYQKK AAQFTLETEELSQTKVDQLFHSSQTNARKNEQDIQNLSLEKGLTQATLQLLLKKIDEFTD YFTIQELSEASQLSHVSVRKYVLFLEKNNLLESKNSYLKVGRPYQSYRRI >gi|237663596|gb|GG668922.1| GENE 160 152632 - 153975 1855 447 aa, chain + ## HITS:1 COG:pli0044 KEGG:ns NR:ns ## COG: pli0044 COG0446 # Protein_GI_number: 18450326 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Listeria innocua # 1 445 1 445 454 363 45.0 1e-100 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSCGMQLYLEGKVKDVNSVRY MTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDI PGKDLDNIYLMRGRQWAIKLKQKTVDPEINNVVVIGSGYIGIEAAEAFAKAGKKVTVIDI LDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVV AVGVRPNTAWLKGTLELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALAT NARKQGRFAVKNLEEPVKPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGKETKAVTVVE DYLMDFNPDKQKAWFKLVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYA DFFFQPAFDKPWNIINTAALEAVKQER >gi|237663596|gb|GG668922.1| GENE 161 154161 - 154826 1042 221 aa, chain + ## HITS:1 COG:no KEGG:PEPE_0980 NR:ns ## KEGG: PEPE_0980 # Name: not_defined # Def: cell surface protein # Organism: P.pentosaceus # Pathway: not_defined # 1 221 1 217 217 198 52.0 1e-49 MKKQILASVALSALTLSIAGQAVYANEANLQDTQADVTLKAGSGKDVKPVVDPTGDTDEN PATGAEGALSIPYASSISFGEQEIQQGDATYFAQNEKPFVQVNDTRGGAEGWALSASISE FKGVTNQNVLKGAQLTLANGQVTTESNQSEAPTIASNSLTLNDSLQPVMSAEKGKGAGAW AALFQGEKGKNENVKLFVPRAGVEAQAYTATITWGLSDAPA >gi|237663596|gb|GG668922.1| GENE 162 154813 - 155841 992 342 aa, chain + ## HITS:1 COG:no KEGG:PEPE_0979 NR:ns ## KEGG: PEPE_0979 # Name: not_defined # Def: cell surface protein # Organism: P.pentosaceus # Pathway: not_defined # 9 342 14 350 352 292 48.0 1e-77 MRQRKTLKRWGTFIPIFFLSLVSWLVLWSAPASAEENQINFEAEAILPETQQSSVSYYDL KVSPGSTQEFKLRLKNVSDQPIKVRVDANNGLTNKNGALDYSQHGKKLLGSPTFEELISP SQTVELQGKETKEVSFQLNVPKNGFEGTILGGFYCYELTDGKEKEIKGFSLTNKFAYTIG AKLVVENKKMEPAFQLTKVKPGLENGYLTLFATIENTEPVLMSQLKMNAFVTKKGKSEKI RELSKQISVAPRSQFELPISWNDEALKKGLYELTIQLEDQNSKKWTLKKAFEIKGEDEKL NEEAVKVTRPASNILLYLVIGSCILIILALFIYILKLRQNKS >gi|237663596|gb|GG668922.1| GENE 163 155858 - 156202 285 114 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518468|ref|ZP_03948517.1| ## NR: gi|227518468|ref|ZP_03948517.1| hypothetical protein HMPREF0348_1451 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis Merz96] predicted protein [Enterococcus faecalis E1Sol] predicted protein [Enterococcus faecalis AR01/DG] cell wall surface anchor family protein [Enterococcus faecalis R712] cell wall surface anchor family protein [Enterococcus faecalis S613] LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis DAPTO 512] LPXTG-motif cell wall anchor domain protein [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF0348_1451 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis Merz96] predicted protein [Enterococcus faecalis E1Sol] predicted protein [Enterococcus faecalis ARO1/DG] cell wall surface anchor family protein [Enterococcus faecalis R712] cell wall surface anchor family protein [Enterococcus faecalis S613] LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis DAPTO 512] LPXTG-motif cell wall anchor domain protein [Enterococcus faecalis DAPTO 516] # 1 114 1 114 114 186 100.0 3e-46 MKKRSGYLVFMLALFFLASANSVHAQQVDSEVGITFYQKNYKDQVVPFEKITPVNEAKQP NRETINSDKGLINQLLPNTGEKQQLELLTIGLLLISIILFVVARRRKKGWKADE >gi|237663596|gb|GG668922.1| GENE 164 156195 - 158306 1814 703 aa, chain + ## HITS:1 COG:no KEGG:PEPE_0977 NR:ns ## KEGG: PEPE_0977 # Name: not_defined # Def: hypothetical protein # Organism: P.pentosaceus # Pathway: not_defined # 40 702 30 680 681 402 35.0 1e-110 MNKIAKTSFVFIITLIGFALGPQIGEATELVKKISNHTKLSDYGYFKALPGVYTPASHTF VMQSGAETEVIPLEGNVNSSQLTVDENSPAGSAMIRNVGWYQGKKVSIKVSLLKNLSNRA GGTIFFEKERFLTLSLLGDVKVTYEFFDEENQPIQVTTAVNTYDLSKKYYFGVQFPLQSL YSSNPTNIFSRTWNDESGGYWVTYHNETETDAINSQKQQLQILTRPKEKLTFIYRNWNNN QPLEIPYRTDFVAKPEFGGALANSLTLEKPQPVSELKAQQIMPNVAEDRKLSNLEVRFNL TNLLQSQQYEPGNINIQNFNGEDVTALFSQEMQGEELVLTALQPQDSRLTATTLLYTVAV KWREDAQAVDNRFIDTEGNLTLPYTIQTKATNRDKVFNQATEGMLKVNYNSKVNLLFVDE NNQPLKEPMSQPGILTQAFDVSSEYPEIPGYYPVKNPVEQDQGTFKQEEQTIVHRYRKNL EFQLKNSGEAIPVSRFTKEAEVAYSLKHEAGKTIRVMARFGGEEQLVKEYPTAPETVGDQ VKMMIPDNWLDQEVEFYAMNETGQVSNNEKKIVSLEKGPQLKLPNVLSFGQQEIPVKDSY VKLPQEAELAITDESQLDKSQWKVKVKMQQMMKNQNNQTLSKGLSFIKEGKRTPINDVEQ TIASGSGSQMLNLANTFELTLVPSDVAGSYQGQLVWNLEDAPI >gi|237663596|gb|GG668922.1| GENE 165 158494 - 159957 1074 487 aa, chain + ## HITS:1 COG:no KEGG:PEPE_0981 NR:ns ## KEGG: PEPE_0981 # Name: not_defined # Def: hypothetical protein # Organism: P.pentosaceus # Pathway: not_defined # 226 482 6 262 263 279 55.0 2e-73 MHTFLTKSSQKKIRLFNYLLEKNKWRTIADLKDLLNVSSKSILLYVEELSDIFKQFNGKI VLKNENNQRFYMYKDANFPIYNVYLHYYRQSYNFNLIDYMYKYPDRNLEDYADAQFTSVS TVFRYAKLLVKYFKRYQMTFHTFSLELENQESMSRSFYYYFYWQSSRTGDWPFTISEKLI KQYIEQFEEVYDIELLRLPKRIFSYWLAIVLERAPQKRVELLDEIKQVADSDKAFPLVKM WLKKCNLSLPEEEIYFIYRIIYSFGVIDGNPRYEVSHALAHKLHHTTSYQAVLLLNNLTQ KDYQFQLDLSDSELIFNFVAFHERSQFFFGNTDLFFNQSYINEIKRQNTEIAQLMENFHR DLQEQATKEVKEILKNWEQLFLNYYYVLDYYDLLLKKLTPIKILIADDLHHTHRLWLMNK IKNYFGKAYPLAFYDYEVDASEVDLVISNYYFDTKGTTLLLMKNIPTERNWRNLEKILYK ITHCNDK >gi|237663596|gb|GG668922.1| GENE 166 160200 - 160295 158 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVAFGMVVISVKLIGIGLFCYYELKAEKNCS >gi|237663596|gb|GG668922.1| GENE 167 160308 - 161141 950 277 aa, chain + ## HITS:1 COG:SA1745 KEGG:ns NR:ns ## COG: SA1745 COG1131 # Protein_GI_number: 15927505 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Staphylococcus aureus N315 # 1 273 1 284 290 170 37.0 3e-42 MQLENISKTIDKKEILTNISITVEPGEIVGLIGPNGAGKTTTMKIMSGLIVNFQGKVVGQ ERIGVLIDGPKYFPNRTARENLNYFRALSKESYSVDYVESLFDMKNYGKKKVKDFSLGMK QRLGMALALINKNELLILDEPMNGLDPDGVQATIQTLKHLAKELHIGIVISSHILGDLDK LCDRAYFIKNGAIIQTVTLGKEVSVYQFTFDEENEDKVSEISALFDGVEQRHPLWLISEA DYPLFLKELVLNDIIPLEMKKHALNLEDVYFSLVEGE >gi|237663596|gb|GG668922.1| GENE 168 161145 - 161846 521 233 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518472|ref|ZP_03948521.1| ## NR: gi|227518472|ref|ZP_03948521.1| hypothetical protein HMPREF0348_1455 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_1455 [Enterococcus faecalis TX0104] # 1 233 1 233 233 342 100.0 1e-92 MKVKAVLKQDIQRRIFWFSGNYLIMFAILGLVPPFLNYFFGDMFDVNDYISAMNFINSLL LPILVVSFVVDDQGSRISDYYFKTRQGRHLYLFSLLICGLCLGLLAGFLLIGVCALLSMV LSVAVSWKVLTVLLASYILLPLFYLVLGITMYLFFHIQGVTLTIFNLVFVMIVPILINIG ASTIGWVVLLQSPFYILTFLGMGSGTMDELFYCLVSILVLYGINHWKILRIDF >gi|237663596|gb|GG668922.1| GENE 169 161919 - 162827 1157 302 aa, chain - ## HITS:1 COG:BS_lytR KEGG:ns NR:ns ## COG: BS_lytR COG1316 # Protein_GI_number: 16080618 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 22 300 24 304 306 247 42.0 2e-65 MSKGKKIFAIIFGIILVLFLAVVGMGAKLYWDVSKSMDKTYETVERSKKSQVNLNNKEPF SVLLLGIDTGDDGRVEQGRSDTTIVATVNPRDKQTTLVSLARDTYVDIPGQGKQDKLNHA YAFGGASLAMDTVENYLNIPINHYVSINMAGLKELVNAVGGIEVNNNLTFSQNGYDFTIG KISLDGEQALSYSRMRYEDPNGDYGRQERQRKVIEGIVQKVLSLNSVSNYQEILTAVSDN MKTDLSFDDMKKIALDYRSAFGKVKQDQLQGTGFMQDGVSYQRVDEQELNRVQQELKNQL NN >gi|237663596|gb|GG668922.1| GENE 170 163105 - 164757 1927 550 aa, chain + ## HITS:1 COG:SA2008 KEGG:ns NR:ns ## COG: SA2008 COG0028 # Protein_GI_number: 15927787 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Staphylococcus aureus N315 # 5 547 8 551 554 695 64.0 0 MSKKGSDIIVESLINHEVPYIFGIPGAKIDGVFDALVDKGPELILARHEQNAAFMAQGIG RLTGEPGLVIATSGPGASNLATGLVTATAEGDPVLALAGQVKRSDLSKLTHQSMNNAALF SPITKFSTEIQDPETLSENIANAYRIAKTAKKGATFLSIPQDVTDSPVTGEAIKPLSAPK LGHASAETIAALAERIKQAKLPVLLLGMRASARKVTAAIRELVAITGLPVVETFQGAGII SKELEEHFFGRVGLFRNQPGDRLLKRSDLVIAIGYDPIEYEARNWNAEKDARVIVIDEVQ MEIDQYMQPEEELIGDMSKNILKLSEAFSEPILTEDAQDYLETLQEKLTIKEVKTSTIEN RLHPLEIVQTLQEKTTNEMTVTVDVGSHYIWMARHFRSYEPRHLLFSNGMQTLGVALPWA ISAALVRPNTQIISVSGDGGFLFSAQELETAVRLKQNIVHIIWNDGSYDMVKFQEEMKYN RSSGVDFGPVDFVKYAEAFGAKGVRVHSQAEFAAALEEGMQTEGPVIIDVPVDYSDNQEL GKTLLPDQLY >gi|237663596|gb|GG668922.1| GENE 171 164769 - 165473 827 234 aa, chain + ## HITS:1 COG:SA2007 KEGG:ns NR:ns ## COG: SA2007 COG3527 # Protein_GI_number: 15927786 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alpha-acetolactate decarboxylase # Organism: Staphylococcus aureus N315 # 6 234 5 234 234 233 51.0 3e-61 MSEQYVYQHGTLGGLMESLMAGTAEIGTLLTQGDFGIGTLEGSNGEIILLDGILYHANQT GEITILEGEELTPYAAVTRFQEDGAFPVSTETDENIKAQILEKISPNFFAAIKISGLFAK MHVRVAPKQEKPYPPFVEAARNQPEFTAENIQGTVVGFFTPKLFHGASAAGFHLHFISED HQFGGHILDFGIKQGTVSWMEAAELRQHFPVHDADYRNKEIDIAKALSAIEEAE >gi|237663596|gb|GG668922.1| GENE 172 165631 - 166713 997 360 aa, chain + ## HITS:1 COG:no KEGG:EF1215 NR:ns ## KEGG: EF1215 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 360 1 360 360 655 99.0 0 MDTLYRSWQLSGWLYHDIFVIIVAIIFIVISGILVISLIRRRSTRRLVPYALILLVYFAV VHFAGLIFFGMFRSVTIEEKSATFYSEKTKGLTSIERMIIPNGRTNGISTSNSLFQVISV NSQTGERMWSKRLGWRDYLIGQTDQYVVLNNADNEAIYLLDTKTGKKQFSEADLVKKFPE LKDYLSSDFVDYRFMDNRYLYIYGLNNRYYQLDLKNWQLKQDPTFKEVFQTQEAPKWTVD SNESQIGQELSSEERTTVQGKLEEQLIAPVLLGKKDEENYYVLSYKKRQSIQAIVGLYNW QKKTYEWQTPLLLTKENVPIEAFQVEDALFIKVPRYLYKINLNNGNQEYQFDYRWGQVIR >gi|237663596|gb|GG668922.1| GENE 173 166827 - 167546 709 239 aa, chain - ## HITS:1 COG:no KEGG:EF1216 NR:ns ## KEGG: EF1216 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 238 1 238 239 454 95.0 1e-126 MNKKNLLTYQSMTVLFLVFSLFTFDPSVSFATRSGKTPVSVELELGGLPGDESVDDTVDP DLENPNTSFDLLFIPKEFTFETQAISGDLTAVPIRPSEGNTHTMRHFGMGDVRGALTGWH VTAEIPHMRNEAHSLLGIITFQLTGGYARYDKTLRRFFMTNTMYGLDFSEDPAAPDFPTN PIIIGNGATLMSNAGDRKGQGMWSGRMTDISLAIQTPVSQLFPGAYTGSIIWNLISGPA >gi|237663596|gb|GG668922.1| GENE 174 167795 - 168199 518 134 aa, chain + ## HITS:1 COG:no KEGG:EF1217 NR:ns ## KEGG: EF1217 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 134 1 134 134 233 96.0 1e-60 MSKCLGLLMILFVLSGCSGSRDSQQEVVIEKSANNDKVRQFVDQKNPHLGTQLEAESYTK QEAIEFLQNGLGIPTNDSAFHYTFKQSNKGSYVVQIRSEKNSVSKENELFGYYQVYQDGI IVKMMEKDQTFQEN >gi|237663596|gb|GG668922.1| GENE 175 168407 - 169243 953 278 aa, chain + ## HITS:1 COG:AGl889 KEGG:ns NR:ns ## COG: AGl889 COG1176 # Protein_GI_number: 15890561 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 21 257 74 310 326 175 39.0 9e-44 MNKKVPYLIVAPGLVLLLFFLMIPLITSILPTIFTDHGLTLNQYVTFFKDDYNVSIFWRT IRVSLIVTGISIVLGIPTAYFIAGVSKKWRGFLMAMTLFPLLTNSVIRSFAWINILGKNG VVNTLLLKTGLIEQPLNLLYTEFAIIIGSVYLFLPTMIMTLVGVMENIEGEMLEAAETLG ANPMTAFRKIVLPLSIPGTIVGSILVFTGTLTAYTTPQLLGGNQKMMMSTFLYQKANTLG DWQSASVLAFIMILTTLIVMKGLDMVAKKVDRREANHA >gi|237663596|gb|GG668922.1| GENE 176 169236 - 170015 765 259 aa, chain + ## HITS:1 COG:SMb21275 KEGG:ns NR:ns ## COG: SMb21275 COG1177 # Protein_GI_number: 16264527 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Sinorhizobium meliloti # 10 256 10 256 259 189 44.0 6e-48 MRKQKGLSVIAILVFLFLFLPLCLIVVTSFGTAAAIQFPIKGFTLDWYAKALQSETFMDS FKLSLLIGVLATVLALIVGIPASYALARYSVRGRNFIKSFFLSPTVIPGIVVGYTLFQYI VIKLGLPVFQGLLMGHFLISLPYIIRVVGSSMEQLDYSMEEVAWTLGCTRLRAFIQIVLP NVSSGIFAAFMLAFVNSFNNVPVSMFLSGPGVTMLPTSLLSYMEYNYDPTVSAISVLLML LTMGLMFLIEKTLGLASIA >gi|237663596|gb|GG668922.1| GENE 177 170054 - 171094 1126 346 aa, chain + ## HITS:1 COG:SMb21276 KEGG:ns NR:ns ## COG: SMb21276 COG3842 # Protein_GI_number: 16264528 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Sinorhizobium meliloti # 3 346 6 340 342 298 45.0 7e-81 MTFVDLKDIRVSYDGKQDILKDLNISMEKGELVSLLGPSGCGKTTTLRVIAGLIKPNDGQ FFVDQEELTKVPVHKRNFGMVFQSYALFPHLTIAENVAFGLKLRKESKQTMDQKVAEMLK VCGLESLGDRYPKQLSGGQRQRVALARALIIEPKLLLLDEPLSNLDAKLRVAMRIEIKRI QQQLGITTVFVTHDQEECFSISDKVAIMNNGVIEQYDSPETIYRLPRTKFVAEFIGFENF FSVEKMEAGHYRTQTDQIVKTTNPEPNVTTTVATIRPEDIEIVSEAATNTVAGTVAVRTF LGKSYQYEVETALGTLLVNGTSEQLYETNETIHLAFPAEKLVILEK >gi|237663596|gb|GG668922.1| GENE 178 171121 - 172185 1388 354 aa, chain + ## HITS:1 COG:AGl890 KEGG:ns NR:ns ## COG: AGl890 COG0687 # Protein_GI_number: 15890562 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 10 354 6 340 340 143 29.0 7e-34 MKKRVILGTLVAATLLMTACGNSEATTKSESKGGSNALVVSTFGLSEDIVKKDIIAPFEK ENEAKVTLEVGNSADRFTKLKNNPNAGIDVIELAQANAAQGGKEGLFEKITEKEVPNLSQ LTPGAKEVFESGAGVPIAVNSIGIVYNKEKLGKEIKNWDDLWSADLKGKISVPDVATTAG PLMLYVASEHAGQDITKDNGKAAFEAMKELKPNVVKTYSKSSDLANMFQSGEIEAAVVAD FAVDIIQGAAENVTYVVPESGTYANYNTVNIPKKAQNKETAFKFVNARISEESQKAKAIS LNEGPTNQQVTLSEKEAKNKTYGAIAERAKTVDFNFINSQLADWIDQWNRTMNQ >gi|237663596|gb|GG668922.1| GENE 179 172206 - 173945 1689 579 aa, chain + ## HITS:1 COG:CAC0887 KEGG:ns NR:ns ## COG: CAC0887 COG1001 # Protein_GI_number: 15894174 # Func_class: F Nucleotide transport and metabolism # Function: Adenine deaminase # Organism: Clostridium acetobutylicum # 5 562 19 569 570 270 30.0 5e-72 MNVDVLLKNVWLYQTVTQTFVQRNVAIKNDKFYYIYEEENVNLQPKKTINAENQWMIPGL IDAHMHIESSMTTPTIFSKAVVRYGVTTVIADAHEMANVFGLEGLKAFMAAETELDIFHA IPSSVPSTTPELETTGGIIGLAEVAELLKEPKVICLGEAMNFKGISYEPDSLIRQIIDLC QKQRPTMPLEGHCPKIEDQELADFLYSGITSDHTHQFPKTLKEKIEAGVFIQFQNKSITP ENIQVIVDNDFYNYASIITDDVMADDLLKGHLNENVKKAVQAGLPIEKAIYMATYTPAKR MGLHDRGEIAPGKKADFLLLNDLESFDINTVYKSGKVVFEKGEPFHYPEKIEEFPAAYQQ TIQCKKLTEEDLLLKVATTKETVRCNVIQKQEIGTFTERITKEIPVENGLLQWQKANCAL LIVMERYGKNGNISFSLMDQPLSEKGAIATTWAHDHHNLMVMGNTIEDILLAQNELLAMQ GGYLVASDQQVMATCPLPIGGILSQAPIEQLGAALQKVRQAMQALGYQNMNEIMSFSTLS LPVSPAIKVTDFGMMDTKSQRFYPLVFPEDGVLLHENTH >gi|237663596|gb|GG668922.1| GENE 180 173929 - 175257 1343 442 aa, chain + ## HITS:1 COG:MA1276 KEGG:ns NR:ns ## COG: MA1276 COG0402 # Protein_GI_number: 20090140 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Methanosarcina acetivorans str.C2A # 4 436 15 440 442 257 35.0 4e-68 MKTLIKNVHILTMDEQFSEIKAGYLVIEEDTIVELAPMTTLDEKRMAANQVIDGQNGILM PGMINTHTHVGMIPFRSLGDDVPDRLRRFLFPLEQFMTKELVGCSSDYAIAEMLLSGITS FCDMYYFEDEIAKSCEKMSVRALLGETIIDMPTCDSPEPSGGLFYAETFIRKWQGHPLIT PMLAPHAPNTNSPEVLAKIIELSRRYQVPVTMHVAEMTYEMAEFEKAYQKTPIAFLEELG YLSEPFILAHCILATDEDLASLAATNGKARVAHCIGANTKSAKGVAPIKQMLDQGIIVGL GTDGPSSGNTLDLFTQMRMVANFHKTAHQDRSLFPAKEIVYLATMGGAKTVGLAEQVGSL EVGKKADITLIETQSVNMFPIFDAYSALVYSANASNVEAVWVNGQQLVANKELQQANLKE IKEKLYQAMNTFVKEAKKRAAL >gi|237663596|gb|GG668922.1| GENE 181 175463 - 176332 853 289 aa, chain + ## HITS:1 COG:no KEGG:EF1224 NR:ns ## KEGG: EF1224 # Name: not_defined # Def: Cro/CI family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 289 6 294 294 535 99.0 1e-150 MNIQRFIEKRKARGLSQSELAKGICTQVTVSRFEKNGQVPTLKILIQLCNRLELPLGELF PRVGIKQPEILEKMEEAEFFLITSEHDQLQTILKNIPFDEIKDSQLLLEYYYLQGFVMIF QNASLMDCLFTFEKLLFEEQKYTSDIYRLLAFTGIGMAYAKEGEIEKAEFYFNKVFKEIY LYTIQSMEDTWRVLNVVFHCGVFYAEKGDLETSDALLEYAISICSDNHVTYYLARAAFQL AKNALAEEKPQEQILELLQDARAYAKINKNRILLEAIQTLKETILSKNN >gi|237663596|gb|GG668922.1| GENE 182 176552 - 177487 924 311 aa, chain + ## HITS:1 COG:SPy1138 KEGG:ns NR:ns ## COG: SPy1138 COG1477 # Protein_GI_number: 15675115 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Streptococcus pyogenes M1 GAS # 1 302 1 303 312 300 51.0 2e-81 MQQSQTIYLMGTVIDVFVDHEEPEKILEEVHQRLITYEQRFSANDSTSELMAVNQQAGKK PVSVHPELYQLIALGKKHSCDPASHLNVTIGPLVQTWRIGFKDARVPSEKEIKACLKKIN PEKIHLNPLKQTVFLEEEGMKLDLGALAKGYIADLLITYLKEVHVTSALINLGGNIVTLG PSTHQNKKWRIGIRNPQESRETISLLVEVANQSVVTSGIYERSLTEAGRVYHHLLDPTTG YPLETEMASITIISDASVDGEIWTTRLFGYPIPEALEILNQLDGIEGVIITQDQQILYSS GLADTLHIIHS >gi|237663596|gb|GG668922.1| GENE 183 177514 - 178122 681 202 aa, chain + ## HITS:1 COG:SP1471 KEGG:ns NR:ns ## COG: SP1471 COG0431 # Protein_GI_number: 15901321 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Streptococcus pneumoniae TIGR4 # 1 202 1 201 201 247 60.0 1e-65 MKKIIGLVGTNSEQSTNRQLLQFMQHYFAQEADIELVEIVDFPMFNKPEDKVLPEIVKTV AEKIEAADGVIISTPEYDHAVPASLMNALSWLSYGIFPFVDKPVMITGASYGTLGSSRAQ AHLRQILDAPELKARIMPSSEFLLAHSLQAFDENNALKDSEQIDKLAGLFADFCVFIEIT EQLKHAHAQNKKEAENFSWETI >gi|237663596|gb|GG668922.1| GENE 184 178141 - 179397 1368 418 aa, chain + ## HITS:1 COG:SP1472_1 KEGG:ns NR:ns ## COG: SP1472_1 COG0431 # Protein_GI_number: 15901322 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Streptococcus pneumoniae TIGR4 # 1 187 1 187 187 258 65.0 2e-68 MKLIGIVGSNADSSYNRLLLQYIGKEFYKMFDLEILEIKDIPMFNQSKDQTNSVLIQNMN RKILQADGVIIATPEHNHTIPAGLKSVLEWLSFKIHPLENKPVMIVGCSYYDQGTSRAQL HLRQILDAPGVNAIVMPGNEFLLGKAKEAFDENGNLIAEGTRQFLESTLQKFVEFIDVIS KLEGAKPKDLPEDLHAKGTIETTIEGVDMAADDWVEQAAEAVQAVEGDTYVKLDRGILTV DQLNYFLKSMPMELTYADSNNQFLYYNKKMAAEEMFAKRQPGQVGNPLANCHPPKALKNV EWVIQQLRSGKTDAIRVHVPMHGPDTYVVHNYQAMYDDNGNYAGINEYILDFKPIVDWYL KQTGQELVGGKNVDAVSGASKKEAPETADSVSSASVHEEESAIEKPTVDSVSSASIKE >gi|237663596|gb|GG668922.1| GENE 185 179809 - 181299 687 496 aa, chain + ## HITS:1 COG:no KEGG:EF1228 NR:ns ## KEGG: EF1228 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 496 1 496 496 939 99.0 0 MTTLLDELLDQEFRDKLLIYQTFMNSEGPLLKEEFYGYFDLSTQKLESLCRQINYECTQI SSRSQILFPAKGLISAQKLSQIDYQALRKYYFDQSLMAKLLLDVGLYQKHTIQEFSQIHF MSKSKIYAFSYKLNLILANWRIKLKSTGLVGEEKNIRSFCFQCLYYFYGSNQERLPNILL ENSPGIKRFINDLQLMYQRTFSLNQSAQLFILLTIQRFRVFSDHVVDSFTEVHVPSCLQH AFEKIYTSETPLFKEDFGKETSYIFLFLSLNEYIDSPIVFPDKLTMLDEFIDHMNSVIPF FEKRITVETKEKLKLICYRWDRLYFSVAAFIPAKQSSFFEERFPQIHRALDGFIQKTESL HQKRFLMYERVHLYYDFMFCLLNDRSFCAIEKTIHVFVDFSGGEDYNRFIAKIIASFNYM DVMIDHKLTLETDLYLSDFYSSKVRCRQLTWRHLPETKDWQVFAEVVRELRKGETQKNEH YGRDPIEMWREQEYEG >gi|237663596|gb|GG668922.1| GENE 186 181241 - 181924 349 227 aa, chain + ## HITS:1 COG:no KEGG:EF1229 NR:ns ## KEGG: EF1229 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 226 1 226 227 407 98.0 1e-112 MSTMGETQSRCGENKNTKDSQLRQAGNYKDLTGQKFGELTVVAPTAKRKEGLIVWACRCS CGSYTEASRRQLIRGYRTKCAHHRYQTMLKKNYHELVVVRIESIQQTMKAYCLCSCGQAC WVRCENLLNGHTKSCGHRKKKDYRQRVAGVIPGKLQSKRPKNNSSGHKGVSQTASGKWLA YISLKGKRHNLGIFTKKSEAILARKLAERRLFQPILQQEIVTTNKEV >gi|237663596|gb|GG668922.1| GENE 187 181945 - 182040 181 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLAGLFSVTGMILLGILFCLIGYQTFRKHHH >gi|237663596|gb|GG668922.1| GENE 188 182248 - 183072 971 274 aa, chain + ## HITS:1 COG:L42411 KEGG:ns NR:ns ## COG: L42411 COG1408 # Protein_GI_number: 15673582 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Lactococcus lactis # 2 271 3 277 278 239 44.0 3e-63 MVKKIGLSIMLLFFFLIIALPIYAWKIEPNLVHVNQVTLGKKNQREPLNVVQLSDIQVSE FYETKRLDKVIKKVNREKPDIIVFTGDLFDNYAKNPQQKEPMIEKLKQLQATIGKYAVWG NHDYGGGASGVYDEVMEASGFTVMKNQGETVTLADGRRLFIGGLDDSLLGNPSVSETLSY RETYDYALLMTHEPDVADAFIGTGTQLVLAGHSHGGQIWIPFYPITNVLAEKYTRGLYQL DQETQLYVNTGLGTTAIHARFGVIPEITHFTIYI >gi|237663596|gb|GG668922.1| GENE 189 183364 - 184275 958 303 aa, chain + ## HITS:1 COG:BH2112 KEGG:ns NR:ns ## COG: BH2112 COG4209 # Protein_GI_number: 15614675 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type polysaccharide transport system, permease component # Organism: Bacillus halodurans # 4 299 39 335 337 225 41.0 6e-59 MKKLKKFYDQRQLHWMVLPGVAFMIVFNYIPIYGIIIAFKNYTIVDTVSSAPWVGLENFR IIMEDSFFWEAVRNTLAISLMKLFLGFAIPIILAVMIFEMRDGHLKKVIQTISYIPHFFS WIVLGGMLISWLSTNGFINQVMMSLGLMNQGVNHLLDPDKYWWIAVLSDLWKEVGWGTIL YLAGMSRIDPTFYEAARIDGASKLTQIRTITLPLLAPIISLNLILNVSGLLGSNLDQTLV LMNAQNQNKSEVINSFVYRMGLTQGDFSYATAVGLGISVISIVLLVITDRITRKMNNGRS VIL >gi|237663596|gb|GG668922.1| GENE 190 184290 - 185171 637 293 aa, chain + ## HITS:1 COG:BS_lplC KEGG:ns NR:ns ## COG: BS_lplC COG0395 # Protein_GI_number: 16077779 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus subtilis # 6 292 10 294 295 220 41.0 3e-57 MIKRKSKENKWFYFFNTLILVLFSLLIIVPIWNILVSSVSSSSGLAGKGLVLWPKGFTLE NYRKVFSDSSIPRAFLISVLKTVIGASTHTLFCAIVAYGLSKSRLVGRNIYTTMGVITMY FGGGMIPTYLLIKSLGLLDTFWVYIIPALFSYYDVVILMNFFREIPPSLEESAKIDGASE FQIFYKIFLPLTKPALATIILFNGVGQWNDFMTTKLYITKEYLYPLQMKIYEIIVQSNLS TMTESGSTDMVVQATTRGVQLATIVITTIPILIIYPLLQKHFIGGMMAGAVKE >gi|237663596|gb|GG668922.1| GENE 191 185189 - 186787 1985 532 aa, chain + ## HITS:1 COG:BH1913 KEGG:ns NR:ns ## COG: BH1913 COG1653 # Protein_GI_number: 15614476 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 90 420 76 411 551 96 25.0 1e-19 MKKVLGGLLVATAVVSLAACSGGEKKASSDVSIKDRYELDEKTPAWKLDKKKEPTKIKWY INSDWTALPFGKDVTTAQIKKDLNVDIEFISGDDSKLNAMISSGDMPDIVTLTEKTGQAA LKADSWAYSLNDLAKKYDPYLMKVVNQDTFKWYALEDGKTYGYPNYSNTKADYESGNIPV NDNFVIREDVYNALGKPDVSTPENFEKVMQQIKEKYPEMTPMGFTTVGDGAGPFLDKLQD FLGVPLEDKNGKYYDRNLDKEYLEWLKTFNDVYRAGNISDDSFTDDGATFDEKVKQGNYA TMLVAGTSGQGGNFTEFMKKSGTRYIAIDGPSSTSGRKPTLNQTGISGWLSNYITKDAKD PAKVTQLFTYLIDEPGQILTKYGVEGVTYAYNDQGKIDYLPEVKKLEQTDNDAYNKKYGI SRFLYFNNDRVNKLKVPMESALTQMQEWGKGKLVPHFVIENINPDAGTPEARANEAIETK LNTTVISMIRAKDDKAFDKSLEDYKAFLKSNKWDAIEKIKSEKMAENRDKLK >gi|237663596|gb|GG668922.1| GENE 192 186844 - 187437 394 197 aa, chain + ## HITS:1 COG:no KEGG:EF1235 NR:ns ## KEGG: EF1235 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 197 1 197 197 252 99.0 5e-66 MNKLFAYEGWYYRIFSFIANLIIINFLFLITCITGIFSGVGLIALYRTIYRLYREKDIPV LRTFWTALKNNIMRGFILTGVLFVAFLLGGIVVTSLFKIATSLGFLAIFLLSFVALFLTS FLFLFSVFNWSVKKTLGETVYVVLSNSANAIILFILPLLTFVFFYKLNLFLYIALGFGTT AFLQVAFFQKVLGVEHE >gi|237663596|gb|GG668922.1| GENE 193 187430 - 188347 815 305 aa, chain + ## HITS:1 COG:TM0077 KEGG:ns NR:ns ## COG: TM0077 COG3458 # Protein_GI_number: 15642852 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acetyl esterase (deacetylase) # Organism: Thermotoga maritima # 3 297 23 324 325 163 33.0 5e-40 MNEYFEFWQKTKEELQKIPLDIHRRVIDYPLENVQVEQVDFLSFLGERIFGYLLLPKTAG KQPIVIDCLGYMNHIQEPWQFAHWTQIGCACFVIDNRGQGGLTKDRVPYQTIWHEAPMGR GFLDKEDWYQRRLFADHLRSVEVVRTFTEINQDQIILRGGSQGGGVVLMVNSLVDFPILA TFADVPSHSCLENRVAEGTGSYQIIHQYLQEHPQAHEKIAAVLPYFDSRHFVSQIKNPVF ASVGSHDPICPMKDFFPSYHQIKARKAVRVYWKKGHGGGETTQIRREMRQIQQLLQEVKN ENSYV >gi|237663596|gb|GG668922.1| GENE 194 188328 - 189092 639 254 aa, chain + ## HITS:1 COG:lin0348 KEGG:ns NR:ns ## COG: lin0348 COG3568 # Protein_GI_number: 16799425 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Listeria innocua # 3 247 4 252 257 168 35.0 9e-42 MKIATYNVRVDTEYDQDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQVRDLKAYTTFTC LSAEREGDGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPEAGCPRIALWGLFKET TQNTPFLVINVHLDHISAHARLAGMTVILEELHDKIAQYPTLLMGDFNAESGEEVHQLVQ KKFQDSKNLATHYGPRGTFQNFTYTKPWAELEEIDYIYVKGWQVQQTASLTDSIDGRFPS DHFPLEAEVCIEER >gi|237663596|gb|GG668922.1| GENE 195 189097 - 191247 2470 716 aa, chain + ## HITS:1 COG:lin1840 KEGG:ns NR:ns ## COG: lin1840 COG1472 # Protein_GI_number: 16800907 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Listeria innocua # 1 712 1 717 723 634 47.0 0 MKENQLIQLVEEMTIDEKINQLLQLAAAFYSDKAEEKTGPMSELGLSQETIDTAGTTLGV SGANEAKRVQKEYMQNHRLNIPTLLMADIIHGFRTIFPIPLALGSTWDEAAVEKMAEISA KEAAVSGLHVTFSPMVDLVRDPRWGRVMESTGEDPLLNSRLAAAMVRGYQGENLKEDNWR VAACVKHFAAYGGALAGRDYNTVDMSERQLREMYLPGYKAGLDAGAKLVMTSFNTVDGIP ATGNQWLFRDVLRNEFGFEGVVISDWGAIKELIPHGVAKDEKQAAELAIKAGVDIEMMTT CYPDYLKELLEEGRIAETLIDEAVMRILKLKNELGLFENPYRGADEQAEAEVILSKEHRE IAKKIAQKSMVLLKNENILPFTPQEKIALVGPGAQSQDILGAWSWQGKKEEAISLMAGAK KLTTNLLVAQEPFDYFEPTAAAIEEALTLASQADKVVVALGETDWMSGEAASRSDIRLPE KQLAVVAQIIEKNPNVVVTVYSGRPLDLQGIDVAKGIVQAWQPGTEGGNALAEILWGQYN PSGRLSMSFPETVGQVPIFYNVDNTGRPYESAPEEKYVSKYLDVSNYAKYPFGFGLSYSH FSYQPIQLSALTFTKEQPITVSVLVRNDSPIAGEETVQFYVRDLVGQVVRPIKELKDFQK VWLEPKEEKEVQFLLSEDMVRYVHSDNQVTSDAGEFIVMIGGNSRDVQTATVTLNE >gi|237663596|gb|GG668922.1| GENE 196 191265 - 194540 2841 1091 aa, chain + ## HITS:1 COG:lin1839 KEGG:ns NR:ns ## COG: lin1839 COG3459 # Protein_GI_number: 16800906 # Func_class: G Carbohydrate transport and metabolism # Function: Cellobiose phosphorylase # Organism: Listeria innocua # 3 1086 4 1078 1086 863 43.0 0 MQIKKLKQADTVATFLETGDLKELNSCGMMINQLEGNPLDGSMNQLYLRIITGDTINYRP MIGSNSQSDFYLSDNQLTWRGEFEAVRYQVDFRLGPSNQWFWRVNVTGTGLVDIVYGQDI GLATKGAVQSNEAYVSQYLDHHIWQEGEELVVLSRQNQPQNEKFPALIQGSFQKLVGYST DGYQFFGRSFKQTNTPEALGKRYLANEVYQYEFAYTALQTEAVQLTNESKEFVFYGAVTE THPQALAEPFLSKEDLQAIYETVTFDSLEETQDFPPKLLGEPITGNPLTEEELAALYPIQ TQIEKVAGQTYSFFTENYHHVVLQEKEIAMERAHGHILLSGKGLTVDEPLLSTTVYMYGI FNSQVVLGNTTMNKLMSNSRNALNVMKRSGQRIYILENGLWRLLTMPSAFEMGLNSATWY YKLPKVTIRVRTFTSPDSRVIQLEVTSQKDAYMWAVSNHLLLGPEEVLTYQLEQTGKTLR VTGNHSATENYYPELTYALTVDKSFQVTDSTLFGGAEADLLVLAIEKTQKFSLLITGSIE DQSLVNSPLDFEKAESQYLAFINGLLHHFELTHTDSSVQQMNQLTRWYTHNMLVHYLSPH GLEQYGGAAWGTRDVSQGPTEFFFATQQPKIVASIIQHLFENQFEDDGNWPQWFMFDRYE EQKASESHGDIIVWPLKVVTDYLEQTADYSILATEIPYTSRKDNHKTKETASLFEHLKKE INYIEQHFLPETFLSCYGDGDWDDTLQPYDNRLKEQMASSWTVALTYQVLKKFAALITEI DATYSQHLTILVAGIKNDFQKYMLADETIPGFIYMETPETFEQMIHPNDQKTGIQYRLLP MTRSMLAELLTPEQVSHHLEIIEKELTFPDGVRLMNKPANYRGGVSTNFKRAEQAANFGR EIGLQYVHAHIRYTEAMAKIGQRDKTWQALMQINPVQLKEVVHNAELRQANAYFSSSDGD FKTRYESQENFGKLKDGSIGVKGGWRIYSSGPGIYLNQLITAVLGIRQKAQSVVFDPMLP EKLSGLTLTYQLFDKPVTYKFYPNQSAKIVIDGQEVPFKFEENPYREGGMEVQKDEVLSL LNEASVIEIYH >gi|237663596|gb|GG668922.1| GENE 197 194556 - 195521 967 321 aa, chain + ## HITS:1 COG:lin1838 KEGG:ns NR:ns ## COG: lin1838 COG1609 # Protein_GI_number: 16800905 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 1 317 1 317 321 363 58.0 1e-100 MVGIKDIAKKAGVSISTVSYALNGSSKVTEETRTRIQAIAEELNYVPNMAARTLKRRQTN IIGVYLADYGGSFYGELLEGIKKGLALFDYEMIVCSGKKSHLFIPEKMVDGAIILDWTFP TKEIEKFAERGHSIVVLDRTTEHRNIRQVLLDNRGGATQAIEQFVNVGSKKVLLLSGPEK GYDSQERLAVSTRELTRFGIPYEIIQGDFTEPSGYAAAKKILSQPQTEPVDVFAFNDEMA IGVYKYVAETNYQMGKDIRMIGFDNSELGAFVQPRLATIAYSKHRWGMVAAEKIIHLMRG EAAESEHIYTRFIEGESFPSE >gi|237663596|gb|GG668922.1| GENE 198 195554 - 196084 549 176 aa, chain - ## HITS:1 COG:no KEGG:EF1241 NR:ns ## KEGG: EF1241 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 12 176 12 176 176 317 100.0 1e-85 MSLLVLSTLLSACSTVSGSPASQSAPAPDEVLATSIGTYENRTLLVPDGRLALTALHKGK DYQGKPMFYVLFELTNTTEKTQNIQLMIQSFMEVSQTVHGKAQNLQYAVLTDSPFQDKLD RLADEINPGETIQGAYPYEFINENKPVHFKFRDRLLSLDEPIASEEITITEKSLVR >gi|237663596|gb|GG668922.1| GENE 199 196355 - 197068 839 237 aa, chain - ## HITS:1 COG:lin0390 KEGG:ns NR:ns ## COG: lin0390 COG2188 # Protein_GI_number: 16799467 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 1 234 1 235 237 167 39.0 1e-41 MRTNTRYKEIYASIKQDIEAGVYPINQKLPQGRLLAEKYQVSELTITKALHLLVQEGYVV RRRGSGSFVQDFQNRTITKFSPLTGTYSTYDGKVESVVLGFATEVPEPWVTEKLSITEEE LVYKIIRLRIIEDVPSIIEYTWMPVALIPNLTMKELKVSIYQYISEQLHQKIQSARVSIS GIRPSALEKKYLNLTDNDFLMRAEQIAYLGNGHIFEYSIANHIPSEFTFETVLIAEK >gi|237663596|gb|GG668922.1| GENE 200 197311 - 198744 1710 477 aa, chain + ## HITS:1 COG:L179659 KEGG:ns NR:ns ## COG: L179659 COG2723 # Protein_GI_number: 15672157 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Lactococcus lactis # 1 475 1 475 478 739 73.0 0 MEHHQLKAFPQDFLWGSASAAYQVEGAWNEDGKGASVWDEFVRLPGKTFKETTGDLAVDH YHRFKEDVALMKQQGLKAYRFSIAWTRILPEGRGQINQAGLKFYSDLIDELLAAGIEPMV TLYHWDLPAVLQKEYGGWESRKIIADFVAYAKILFDAFRGKVRYWISLNEQNVFTSLGYQ LAVHPPGVTDNKRMYEANHIANLANAAVINAFHELEMPGKIGPSFAYTPVYAVDAHPANV LAAENAEDLLSHFWLDVYLWGEYPIAALNYLQEQGVAPTIKEGDLALLRSAKPDFLGINY YRTDTVAANPLDGVGIGKMNTTGEKGSETESGVPGLFKKVNNPYVERTNWDWAIDPQGLR IALRRLASRYQVPILITENGLGEYDTLTEDKQIHDTYRIDYLRSHIQAIQEAITDGVSVI GYCTWSYTDLLSWLNGYQKRYGFVYVDQDETQKGSLERIPKDSYYWYQKVIETNGLI >gi|237663596|gb|GG668922.1| GENE 201 198769 - 199818 1252 349 aa, chain + ## HITS:1 COG:ECs4289 KEGG:ns NR:ns ## COG: ECs4289 COG0673 # Protein_GI_number: 15833543 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli O157:H7 # 1 348 1 345 345 351 51.0 1e-96 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTTDLNEL LTDPEIELITICTPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVM PYQNRRFDGDYLAMKQVVEQGFLGEINEVETHIDYYRPGSITEQGPKENGSFYGLGIHLM DRMIALFGRPDQVTYDIRNNEVSEAVDNYFDVDLHYGSKLKVKVKTNHSVASPYPRFIVH GSNGSFIKYGEDQQENDLKAGIMPDAPGFGEDSPMYYGEVTYRNGNGDWIKKQIKTPVGD YGRYYDAVYETLRNGAPQLVTKEQALTNIEILEAGFLNPSPSVYRLKEN >gi|237663596|gb|GG668922.1| GENE 202 200292 - 200750 503 152 aa, chain + ## HITS:1 COG:lin1603 KEGG:ns NR:ns ## COG: lin1603 COG2707 # Protein_GI_number: 16800671 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 2 142 4 144 153 113 56.0 1e-25 MESWLFLLLIALIAFVAKNQSLLIASVVVLALKALPNSAKIMSWLSDKGINLGVTIISIT ILVPIATGQIGLKDLIQSFKTPMGWLGILCGILVAVLSSKGVGLINQSPEITVALVFGTI LGVVFLKGIAAGPIIASGMMYVIITTFQAFQH >gi|237663596|gb|GG668922.1| GENE 203 200891 - 201232 435 113 aa, chain - ## HITS:1 COG:no KEGG:EF1247 NR:ns ## KEGG: EF1247 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 113 1 113 113 221 100.0 6e-57 MSLTISEEVKQRLAPFLTETNTFLLVANDGSNPYSSAEGCCMIGDRFIIVPVDQAEAPYT ETIANDSFHVYTSTYDQMFLTGHLQLVIHPNAGTITLKNESGILDSNVDIYQH >gi|237663596|gb|GG668922.1| GENE 204 201306 - 201569 431 87 aa, chain - ## HITS:1 COG:no KEGG:EF1248 NR:ns ## KEGG: EF1248 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 87 1 87 87 110 98.0 1e-23 MVFLHIIFGMFAFIGALGLGVAFRDSFTELSTPKKAAIILSYVGAIGSTVLGFTSATKNP FVLAATVVLVVAFSVALFKKSSKETSK >gi|237663596|gb|GG668922.1| GENE 205 201725 - 202996 1337 423 aa, chain - ## HITS:1 COG:SPy1013 KEGG:ns NR:ns ## COG: SPy1013 COG1293 # Protein_GI_number: 15675016 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Streptococcus pyogenes M1 GAS # 2 412 149 544 550 342 48.0 6e-94 MSQNSYRSLLPGATYIEPPKPMGLNPLTASKEEVFALLSTAPELNGRYLQQHFQGLGKDT ADELSARLLAQPNEKMAIWTEFWSSVTEAVVPTLTVTEKKEYFTPIPYQSLAGEQTTYPT LSELLDAFYSGKAEKDRVKQQGGELIRKIENELKRNQKKLKKLQQTLADTENAENYRRDG ELLTTFMAQVPKGATEVELPNYYEENAPLRISLNPALSPNQNAQKYFQKYQKLKNAVRVV KTQIQQTQQEISYLESVVAQLEIATPMDIEVIREELIEQGYLKRKKNKKQKQPKKSQPDL FYATDGTPILVGKNNLQNDQLTLRTAKKTDYWLHAKDIPGSHVIIRDAHPSEETLTEAAL LAAYFSKYRLSSQVPVDYVQVKHVHKPNGAKPGYVIYENQRTLYVTPTEESIKKIQQNKD STS >gi|237663596|gb|GG668922.1| GENE 206 203137 - 203571 482 144 aa, chain - ## HITS:1 COG:SP0966 KEGG:ns NR:ns ## COG: SP0966 COG1293 # Protein_GI_number: 15900843 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Streptococcus pneumoniae TIGR4 # 1 142 1 142 551 163 54.0 7e-41 MSFDGVFTHSMVHELTETLVSGRISKIHQPYENEVVLVIRAKGKNHKLLLSAHPSYARIQ LSTITYSNPETPPNFVMMLRKFLDGAILETIQQIENDRVIHFTFSKRDELGDLQNIVLIV ELMGRHSTIVLVNQSSGKILELAS >gi|237663596|gb|GG668922.1| GENE 207 203791 - 204450 712 219 aa, chain + ## HITS:1 COG:no KEGG:EF1250 NR:ns ## KEGG: EF1250 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 219 5 223 223 320 98.0 2e-86 MEELKEAFYELRQRKLLMITAIVALVLIIGSIIFIPTMQKNIRAAQVESLVAGPIKSEKV SVLDYKTADKKIQETGAMSVMFAKPSGKQYDQMVKLFNSDKMNEFHRSLYIYPLIYNAGK AQEQYNVSGDEITLVFFENGKEKTRTVVEKSMDLKTQLIPELNRLPMAGVLKDQQKAAQE AEKEAAKNAETQTTTSTTGVAQSTKTTTESTDTVPETGE >gi|237663596|gb|GG668922.1| GENE 208 204514 - 204621 172 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MALVISMTILVSLWLIQSQKQAVKVPVKIERNRNN >gi|237663596|gb|GG668922.1| GENE 209 205430 - 206419 1188 329 aa, chain + ## HITS:1 COG:SP1069 KEGG:ns NR:ns ## COG: SP1069 COG2984 # Protein_GI_number: 15900938 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 1 325 11 339 344 296 52.0 3e-80 MKNKRLTFVVSLLAIYLIGAFFVNQKVTNSKKETVTVGVLQFVSHPALDEIYKGVEEGLK ENGYDKGKNLEIIFQNGQADQSKLAIMSQQLVQKKADVLIGIATPAAQALANTTQEIPII LGAITDPVSAGLVKDNQKPGGNITGVSDQSPLSAQMDLLKELVPAAKKIGILYASSEENS RYQVAEAQKAAEDKGLTVKTYAVPSSNEIAQTVQVMTKETDVIYIPTDNTIANAMQTVVG EANRTKTPIIPSVDTMVEQGGLATVGINQHALGVQAGKMAAEVLSGKSQPATTPIYTFNT GDTIINEKQAQKLGITIPAELAKKSKLIN >gi|237663596|gb|GG668922.1| GENE 210 206444 - 207331 1104 295 aa, chain + ## HITS:1 COG:SP1070 KEGG:ns NR:ns ## COG: SP1070 COG4120 # Protein_GI_number: 15900939 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 283 1 280 288 294 62.0 1e-79 MIVSAIGQGMLWALLGLGIFMTYRILNFPDMTTEGSFPLGGAVCVTAITTGVSPFVATLL GVGAGMLAGLVTGLLFTKGKIPIILAGILVMSGLNSVILFVMKSPNKSLLNQPKIQDVFQ KMALPDYYDTIFLGISVLAVVMILLLFFFNTSLGQAYIATGDNEEMARSIGIQTDRMKIL GLVLSNGLIGLSGALIAQNDGYADVSKGTGVIVIGLASLIIGEVLFGELTFGERLMAIVV GSIIYQLLILLVIKLGFDTTYLKIFSAVILAICLMIPQLKKALRLHGFSDKGETK >gi|237663596|gb|GG668922.1| GENE 211 207383 - 208096 209 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 7 220 38 248 329 85 29 5e-15 MKKKVILDHVNLAIYPGDFITVLGGNGAGKSTLFNSLAGTLTLTEGQFLIEGVNRTNLSE VKRAKSLARVFQDPKMGTAPRMTVAENLLLAMKRGQKRPLTLRKINEQRALFTKICQEVG NGLENHLDTPTGNLSGGQRQALSLLMATITKPELLLLDEHTAALDPKTSKQLMHLTEQRI EEGNLTCLMITHRMEDALRYGNRLIVLQKGKIVQDLNAAEKAQLTLQDLLLFFEEVE >gi|237663596|gb|GG668922.1| GENE 212 208129 - 208590 468 153 aa, chain - ## HITS:1 COG:lin0586 KEGG:ns NR:ns ## COG: lin0586 COG3610 # Protein_GI_number: 16799661 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 3 142 7 145 152 122 45.0 4e-28 MELIFHLLFSFLATVTFGIITNIPRKALVACGITGMTGWMIYYVLTQTFDTSQTFANFLG TVGLGIASIFFSRYKKMPMIIFYIPSLVPLVPGGPAYQAVRSILLGNIDDGLQLILKVVF TAAAIAAGFMVTSLLERIVKRFFPKRLFRLVKK >gi|237663596|gb|GG668922.1| GENE 213 208602 - 209378 725 258 aa, chain - ## HITS:1 COG:lin0587 KEGG:ns NR:ns ## COG: lin0587 COG2966 # Protein_GI_number: 16799662 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 10 258 2 250 250 233 47.0 3e-61 MKGAIPLVNSEKRKQLIIDTCILAGKIMLESGSEVYRTEDTITRIAANAGEPESVCYTTA TGIFVGFRSSNYTQLENIPQRSINLEKVSLVNQLSREFAQKEITLPELYQRLTLLETDTP TFSISLRLLAAGIVSCTLMYIFGGTWQDFIATFFVGVIGYTSYLFTQKLFQVPYLDSFAA AFVIGLLAYLAVHFHLAVNIDNIIIGAVMPLVPGVAITNSFRDILAGHLISGTARGTEAI FIAGSVGLGIALIFKLFM >gi|237663596|gb|GG668922.1| GENE 214 209610 - 209816 223 68 aa, chain + ## HITS:1 COG:no KEGG:EF1258 NR:ns ## KEGG: EF1258 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 68 1 68 68 111 100.0 8e-24 MDNQWLLYGISSVVLIILIRRTILSGNIVLSCLLGAILLIQVVGVALCAQQKKKNEHTKE LPSSKVHQ >gi|237663596|gb|GG668922.1| GENE 215 209834 - 210613 1032 259 aa, chain - ## HITS:1 COG:lin2311 KEGG:ns NR:ns ## COG: lin2311 COG0561 # Protein_GI_number: 16801375 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 3 259 2 256 256 239 46.0 5e-63 MDKMKAIAFFDLDGTLLDGTSQITPEITAAVAALKDNQILPLIATGRTLCEIQPIMKASG IDSAIVMNGQFIHYEGKTIYSDEFTTEECVSLHEHVKQRGHELAFYNERRIFCTGHTGTV KQAYDYIHSAVPEIDPTGYENDAVNMMLVLSQHGDDDEYYYERFPELTFYRNGPFSIDIV RKGVSKGSGVKNLFNTLGLNGIPTYAFGDGINDLALFEACDYGIAMGNAREELKEKATFI STKNTENGIVNGLKKFDLL >gi|237663596|gb|GG668922.1| GENE 216 210828 - 211547 891 239 aa, chain + ## HITS:1 COG:BS_yclJ KEGG:ns NR:ns ## COG: BS_yclJ COG0745 # Protein_GI_number: 16077443 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus subtilis # 1 235 1 226 227 267 60.0 1e-71 MNILMIEDNESVSEMMQMFFLNEGWEATFKDDGKEGLATFLASPEKWDMITLDLNLPSMD GMAVCREIRKVSANVPIIMLTARDSESDQVIGLEMGADDYVTKPFSPLTLIARMKALHRR AEVAEAAHDTSENTDETFDVITDHFKMNTKTRETYLDNQLIEGLTPKEFDLLYTLAKKPR QVFSREQLLELVWDYQYFGDERTVDAHIKKLRQKIEKVGPQVIQTVWGVGYKFDDSGVA >gi|237663596|gb|GG668922.1| GENE 217 211547 - 213016 1370 489 aa, chain + ## HITS:1 COG:BS_yclK KEGG:ns NR:ns ## COG: BS_yclK COG0642 # Protein_GI_number: 16077444 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 1 482 4 467 473 326 40.0 8e-89 MKYLYQQLLAFIGVIALIILIVGTSFTQLTKRTMQENNYEQLYGYAESALETRDFFINVA GVSDRDVLSYSFQLTERVLQKQDVQFVFINKDREVQYPPVDSTKKLDFSLIDKNWDQIMK GNRVYATENIDIYGARNTSSYVMLPVYASNQSSDKKVIIGSLVITQPAKNVDRSVQSVTQ NLIKGFIFSGVIALLLSYLFATFQVKRINRMRKATKEITSGNFDIQLPVHDKDEFDDLAE DFNKMAASLKESQEEINRQEERRRQFMADASHEMRTPLTTINGLLEGLQYNAIPENQKEN AIKLMQNETARLIRLVNENLDYEKIRTNQIQIVVKKFNGKEALENIVTQLTAKAEAAGNQ LYLDTTEPIDVYADYDRFVQVVVNIVQNAIQFTENGEIHLALEKGYLETIVRISDTGIGM TEEQILNIWDRYYKVDPSRKNTKYGESGLGLPIVQQLVRLHKGKINVESELGKGTTFIIS FPDVEITEN >gi|237663596|gb|GG668922.1| GENE 218 213055 - 213606 602 183 aa, chain - ## HITS:1 COG:no KEGG:EF1262 NR:ns ## KEGG: EF1262 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 183 1 183 183 306 98.0 3e-82 MNVTPSFKKTTEKKSSFDALALREVYGIIYSAPEQELALADFFQTNQLTITRLSSSETFL PYLPLEENLFIASTIKERDRKVVLTEAFQVFQLEPALLGRSFTSFTTFEKIKMRIIQLLL SKTSTLVIDDIFSSLTIGQRQEILPQLKIAVQKRNKRLLFLTKDPQIIDSPYVHPLSLHA LLN >gi|237663596|gb|GG668922.1| GENE 219 213621 - 214322 429 233 aa, chain - ## HITS:1 COG:no KEGG:EF1263 NR:ns ## KEGG: EF1263 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 233 1 233 233 363 99.0 4e-99 MRSVRYATASSFYHKKITLITALFFFLFSFLLTGLFNLIDFEKEFLRTMPDFVDIEKQTS YHYQLIQYYWHLYLGSVIFFGVTFLLLMYVTLRIKKEEIHTWYHMHFSNMYVTKQLLLEL CLPALLGIFSFLLFTLMFQETYNTVLWAARDAILQWSHLETPAFLAKSTDQDVTITNIQH LGIQTIQAFSFDFKSMQSLYTIRNCFVNCLILLGIPLVCGTPFTLIYLRTHQK >gi|237663596|gb|GG668922.1| GENE 220 214428 - 216536 1946 702 aa, chain - ## HITS:1 COG:SPy0807 KEGG:ns NR:ns ## COG: SPy0807 COG1368 # Protein_GI_number: 15674849 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Streptococcus pyogenes M1 GAS # 3 694 18 712 736 735 55.0 0 MKKLFKTNILNTRLGLFSLIAILLWLKNLFAYAVDFHLRLENINEYFILLINPIATTVFL LAIALYVRRKKASYITMMIIYFLMSLLLFSNVVYYREFTDFITVNTMLGAGKVASGLGES ALRLFRPYDVIYFLDFIIIGVLLLTKKIKTDARPVRARVAVSVTLLSVVFFLFNLFMAET ERPQLLGRQFSRDYIVKFLGLNAFTVYDGITTYQTNQVRAEASANDMKQVEDYVKQQYAA PDDSKFGIAKGKNVIYIHLESFQQFLVNYKLKDENGVEHEVTPFINSLYNSKSTFSFDNF FHQVGQGKTSDAETLLENSLFGLDQGSLFTQVGGKNTFEAAPDILKQTQGYTSAAFHGNA GNFWNRNETYKRLGYDYFFDASYYDVNSDNSFQYGLHDKPFFNQSVQYLEHLQQPFYSKF IAVSNHYPYSQFTNDEAGFPIAKTSDETINGYFATANYLDKAVEEFFNYLKSSGLYENSV IVLYGDHYGVSNSRNQNLAELVGKTKADWNDFDNANMQRVPYMIHVPGQENGGVNHTYGG QVDALPTLLHLLGVDTKNYIQLGQDLFSKQHNQIVAFRNGNVVTPKYTILGSSIYDTKTG TLITEPTEEVKKEVADLKAKATKQLETSDQITNGDLLRFYTNSGLKPVNPEDYDYKNQLQ QLEAIEKEKGEKSTSVYSKNNNKSTVDEYHTDSYQGYQKTGK >gi|237663596|gb|GG668922.1| GENE 221 216795 - 217967 1100 390 aa, chain + ## HITS:1 COG:L52686 KEGG:ns NR:ns ## COG: L52686 COG1092 # Protein_GI_number: 15672238 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferases # Organism: Lactococcus lactis # 2 390 3 389 389 442 59.0 1e-124 MKLQVTKKAEHKFKKGYPLIQKEDLQQVPAPLPTDWLTLIDSKGQHLAEGYLGEQNKGIG WLLSWHGPINQSFFQQLFEISREKRTSFKKDSLTTAYRLFNGEGDGIGGLIIDRYADYAV FSWYNETLYQKKAELLTAFRTVYPDIIGAYEKIRFSTKNLPESQFLYGEQAPEPLLVTEN GVQFATYLNEGLMTGIFLDQKEVRGRLVDGFAVGKTVLNMFSYTGAFSVAAAMGGAVATT SVDLAKRSLPKTTEQFEVNHLNLAAQKIIVMDVFDYFKYASRKGLSYDMIILDPPSFARN KKKVFSVAKNYGELVKDSIDILTDKGTLIASTNAANLSLAKYQKMVITALQEKNVRYKIT DTYQLPADFQVNPNFPEGNYLKVLFIEIEK >gi|237663596|gb|GG668922.1| GENE 222 218034 - 218951 975 305 aa, chain - ## HITS:1 COG:lin1191 KEGG:ns NR:ns ## COG: lin1191 COG1039 # Protein_GI_number: 16800260 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HIII # Organism: Listeria innocua # 4 304 3 305 308 257 47.0 2e-68 MAQNHVIKVSKKTLAEMTTVYQPNRLNKTVPYTVFVAKVGTTTITAYQSGKVMFQGPQAE KEAARWEGTSTTPQKKVSAQTTTLPADFGNWSVIGSDEVGNGSYFGPVTVCAAYVDKSMI SKLKALGVRDSKELTDPQIIQLSHVIKELIPYKLLIVEPKKYNEIQPNYNAVHMKVALHN QAIYLLLQELAPTKPEGILIDQFTPENNYRKYVRNEKNQVTEKLFFVTKGEQYHVAVAAA SIISRAAFLEELDKESAELGFSVPSGAGSKSDQVAARILKKGGLDLLANYAKLHFANTQK AQKLL >gi|237663596|gb|GG668922.1| GENE 223 219176 - 221590 2088 804 aa, chain + ## HITS:1 COG:L168650 KEGG:ns NR:ns ## COG: L168650 COG0474 # Protein_GI_number: 15672557 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 28 794 4 772 775 718 50.0 0 MRRKKEMQENEPIAVTANAERYYPEDKQGLTAAQVEERKRKGLVNAAVDTEFITTKQIVI NNVFTYFNLIFVVLGVLLMLVQSYKNMTFLPVVIINTVIGIYQEIKSKKVLDSLNILNAT KVTVVRDGQEQEISPDELVLDDVVLFKSGEQISGDAIVLSGEVRVNESLLTGESDEITKV ADSQLLSGSFIVSGSCYARIDKIGAEAYVHQLTLEAKSIKKGEQSEMVGSINRLVKWVGI IIIPIGCVLFFQSYFINHQGLHDSIVSMEAALIGMIPEGLYLLTTVALAASTMRLAKRGV LLHNMKSIESLARVDVLCVDKTGTITENTMEVQELVPVVSIENDGTDLTNVEKLIGDFCR TMSADNDTMKAMKEFFVTNNQREAVSYTSFSSVEKFSSVTFPEATYILGAPEMILRDNYE MYQSEVEHYTSQGYRLLVFGKYLGEFQETLAAEVQPLGYILLWNPIRKEAKATFEYFAEQ NVAIKVISGDNPLTVSNVAQAAGIIGAENYVDARTLTTMEAQTEALEKYTVFGRVTPEQK KQFVLLLKKLDHTVAMTGDGVNDILAMKEADCSIAMASGNQATAQASQVVLLDSDFSTMP EVVFEGRQVVNNIERSSSLFLVKNIFSLLMSVFAMIFAVTYPLQPTQVTLISLFTIGIPS TFLALEPNHRRIEGKFLFNVLSKAIPGGLTDMLVVGALLICGDILALQKTDISTTATLLL VSVGFMVLYKISSPMNRYRKRVMIGCLIGMVITSISMKNLFSLTSVSPTALLLLAILFFA ADSTFQHLSTISEKVQLWFYKKRH >gi|237663596|gb|GG668922.1| GENE 224 221732 - 223618 1715 628 aa, chain + ## HITS:1 COG:lin0203 KEGG:ns NR:ns ## COG: lin0203 COG4932 # Protein_GI_number: 16799280 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Listeria innocua # 58 603 43 562 586 126 26.0 1e-28 MKKRSFVYWGMFFILLSTLITPFLKLETGYAQTEPTSTSETNQISATPNVVPRKQVGNIV TAIQLTDKEGNPLGTINQYTDIYLRIEFNLPDNTVNSGDTSVITLPEELRLEKNMTFNVV DDTGTVVAIAQTDVANKTVTLTYTDYVENHANISGSLYFTSLIDFENVENESKIPIYVTV EGEKIFAGDLDYQGEGDDVNEKFSKYSWFIEDDPTEIYNVLRINPTGQTYTDLEVEDVLK TESLSYMKDTMKIERGQWTLDGNAIWQFTPEEDITDQLAVQYGPDDRNFSVHFGNIGTNE YRITYKTKIDHLPEKGETFTNYAKLTENQTVVEEVEVSRVSQTGGGEANGEQYVVEIHKE DEAGQRLAGAEFELIRNSTNQTVAKITTDQNGTAIVKGLLKDNYTLVETKAPTGYQLSQN KIPITPEDFGKNLVALKTVVNHKISYQPVAASFLAGKVLLGKPLKDAEFQFELLDEKGTV LETVSNDTLGKIQFSPLTFETPGNYQYTIREVNTQQTGVSYDTHNLQVQVTVEALLGNLV ATTQYDGGQVFTNHYTPEKPIESTTPPTSGTTDTTTNSTTETTSITIEKQAIRNKELPKT GETKENAFLFLGSLLLIQGLFIYFKTKK >gi|237663596|gb|GG668922.1| GENE 225 223824 - 224297 590 157 aa, chain + ## HITS:1 COG:lin1358 KEGG:ns NR:ns ## COG: lin1358 COG0779 # Protein_GI_number: 16800426 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 157 1 155 155 172 57.0 2e-43 MSSAVETVTKLVTPILEEQNFELVEVEFVKEGKNWFLRVFIDKEGGIDIEECAFVSEKLS EKLDAMDPDPIPQAYFLEVSSPGAERPLKKESDYEQAVGKYIHISLYQAVDGEKQIEGTL VHLDSEQLTLSVKIKTRVKEMTFERKNIAKARLAIQF >gi|237663596|gb|GG668922.1| GENE 226 224441 - 225640 787 399 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 372 9 372 537 307 44 5e-82 MSKEMLNALDVLEAEKGIPKDTVIEALQAALVSAYKRHYGQASNVEVEFEPKKGNIHVYA VKEVTEEVFDSQLEVSLKDAVALNGAYEIGDKIRFEVTPKDFGRIAAQTAKQVILQRVRE AERTIIYNEFSEYENDIMQGIVERQDRRYIYVNLGKIEAVLSKQDQMPNEFYQPHDRIKV YVSRVENTSKGPQVFVSRSHPDLLKRLFEQEIPEVYDGIVEIVSVAREAGDRSKVAVRST DPNIDPVGTCVGPKGQRVQAIVNELKGENMDIVEWNEDPAIYISNALNPAQVLDVIFDPE NSKACTVVVPDYQLSLAIGKRGQNARLAAKLTGHKIDIKSESDMAEFYEQQANQEVAEVA EEMDEAIIHSDMTADDYENLAAEEAVVEAEITEELPEQE >gi|237663596|gb|GG668922.1| GENE 227 225661 - 225960 496 99 aa, chain + ## HITS:1 COG:L175136 KEGG:ns NR:ns ## COG: L175136 COG2740 # Protein_GI_number: 15672747 # Func_class: K Transcription # Function: Predicted nucleic-acid-binding protein implicated in transcription termination # Organism: Lactococcus lactis # 1 94 1 94 108 96 53.0 1e-20 MKKRKIPMRKSVVSGEMKPKKELVRITRSKEGEVALDPTGKLPGRGAYVDLDPAEVQKAW DKKILDRVLETKLSDEFYQELLDYVTHQKARKELFGDGK >gi|237663596|gb|GG668922.1| GENE 228 225950 - 226255 495 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29375842|ref|NP_814996.1| ribosomal protein L7A family protein [Enterococcus faecalis V583] # 1 101 1 101 101 195 100 4e-48 MENKTKILNLLGLAMRAGKLVTGEELTLKDIRANKAKFVFVAQDASENTRKKIKDKSSYY NVPVSELFSQFELSQAIGRPRMVIGVTDAGFATKIKELLKG >gi|237663596|gb|GG668922.1| GENE 229 226268 - 228664 2689 798 aa, chain + ## HITS:1 COG:lin1362 KEGG:ns NR:ns ## COG: lin1362 COG0532 # Protein_GI_number: 16800430 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Listeria innocua # 1 798 1 781 782 844 60.0 0 MGKKRIYELAKEMNKASKDVVDKAHQLGMDVKNHMGAISSEQETKLRQAFGGGSTVNTQS KATNNQKQQTTQNKPANKKPMNNKPGEQRNNQNRPNNQSTNGQQRNNNNQNRHGQSNTQN RSNQTNTNNQNRNTQNNNGSTTNQNRTSQNNNGGNNQNRGGQNRNNNFGGGQNRNNRNNF NNQNRNRFNKKGKKGKHQQESAKPAVPARKFRELPDVLEYTEGMNVADIAKKIHREPAEI IKKLFMMGVMVNQNQALDKDTIELLAVDYGMEPQEKVQVDIADIDKFFEPEAVVEENLTT RPPVVTIMGHVDHGKTTLLDTLRHSRVTSGEAGGITQHIGAYQLDIDGKPITFLDTPGHA AFTSMRARGASITDITILVVAADDGVMPQTIEAINHAKAAKVPIIVAVNKIDKPGANPDH VKQELSEHELIPEEWGGDTIFVNISAKFNQNIDELLENILLIAEVEDLKADPTQKAIGTV IEARLDKGKGPVATLLVQQGTLHVGDPIVVGNTYGRVRVMTNDMGRRDKEAGPATPVEIT GLNDVPQAGDRFVVFEDEKTARQAGEERAKRALLEQRSASSRVTLDNLFESLKEGELKEV NIIVKADVQGSAEAVSASLQKIDVEGVRVKIVHAAVGAINESDVTLAAASNAIIIGFNVR PTPQAKQQAEQEEVDIRLHRIIYKALEEIETAMKGLLDPEFEEKITGQMTVRELYKVSKV GTIAGCYVTEGFIRRDSGVRVIRDGIVIYEGKLASLKRFKDDVKEVKLGFECGAMIENFN DLRVDDAIEGFIMEEIKQ >gi|237663596|gb|GG668922.1| GENE 230 228689 - 229039 609 116 aa, chain + ## HITS:1 COG:SPy1719 KEGG:ns NR:ns ## COG: SPy1719 COG0858 # Protein_GI_number: 15675570 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Streptococcus pyogenes M1 GAS # 1 113 3 115 118 135 61.0 2e-32 MANYRDRRVGQEIMREVNDILNKRIRDPRVQGITITDVRVTGDLQQATIYYSLLSDLASE QQKAQQGLDKAKGLIRKELGQRLTLYKTPELIFERDESVQYGNHIDELIRKLNQGE >gi|237663596|gb|GG668922.1| GENE 231 229122 - 229352 75 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518536|ref|ZP_03948585.1| ## NR: gi|227518536|ref|ZP_03948585.1| hypothetical protein HMPREF0348_1519 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_0227 [Enterococcus faecalis HH22] hypothetical protein HMPREF0348_1519 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_0227 [Enterococcus faecalis HH22] hypothetical protein HMPREF9507_00843 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9506_03040 [Enterococcus faecalis TX0309A] # 1 76 1 76 76 117 100.0 2e-25 MKRIVVFYKNGDRYLKEMGSGKSSLYFFLFFFVLHSMREHIIQFIGFWPSFIFVLILVPN LMLGVGHINHWYKKRS >gi|237663596|gb|GG668922.1| GENE 232 229412 - 229885 524 157 aa, chain - ## HITS:1 COG:no KEGG:EF1276 NR:ns ## KEGG: EF1276 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 157 1 157 157 283 100.0 2e-75 MNDYEKLVSSIQKDVTVLEIDLYNQTGCYGLYRNGKIYIEKTLSTRQKKNILAEEYGHYQ TSVGTILNQNCTENRKQELKARNVALEQLVTLDDLIRCSEAGLSNHYSCAEFLEIDVETL KNVITYYRQKYGATYLYKGRIFEFRDYSVMVLNTGLT >gi|237663596|gb|GG668922.1| GENE 233 229932 - 230414 556 160 aa, chain - ## HITS:1 COG:FN2065 KEGG:ns NR:ns ## COG: FN2065 COG1396 # Protein_GI_number: 19705355 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 4 78 7 79 155 59 45.0 3e-09 MNIFAVRLKEALTAKNIKPSDLAKKTGIGKSSISDWLAGRYEAKQDKVYRIADALDINEA WLMGQEVPMEKNASTIDRIYKKLEPQRQAIVYQFAEQQLHEQQTQAEILSFPRRDEMTLA AHAGDPEKIFSKEEIEKIHDYLDEIDAKYQQSISSDKKED >gi|237663596|gb|GG668922.1| GENE 234 230632 - 230766 208 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRNYKKTLSDMLLLAIILLISSVSIKIGAIVIGMIGLMELLTE >gi|237663596|gb|GG668922.1| GENE 235 230797 - 231567 685 256 aa, chain + ## HITS:1 COG:no KEGG:EF1279 NR:ns ## KEGG: EF1279 # Name: not_defined # Def: DNA replication protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 256 1 256 256 503 100.0 1e-141 MAERRMFAKTIIDSDAFLDMPLSSQALYFHLAMRADDDGFINNPKKLQRMVGCGEDDLKL LMVKKFILVFESGVIVIKHWKIHNYIRSDRYKPTLYQEEKNQIVEKNSKAYTFKAESSVG GQPADYQRLPQESIVQSKLGQSQGSSSENDCLKMIYHFYEENGFGTLASKTSQDFKYWLQ DFIQKGASQEEACQLILHALGIAVDRNKRNYGYVNAILKSWEQQNYLSVHEVLVNDKKQV LEHAPQMTEEYQELGF >gi|237663596|gb|GG668922.1| GENE 236 231586 - 232428 780 280 aa, chain + ## HITS:1 COG:L0312 KEGG:ns NR:ns ## COG: L0312 COG1484 # Protein_GI_number: 15673401 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Lactococcus lactis # 48 275 62 291 294 103 30.0 3e-22 MHATDQTFQILLSQLLEKVEDRCPECGSEQYVWQQKNKDGTERCAPTCWSCGYKMLKKHE QQANQQRSQESFMARTQKFFHQGSLIADDALRQCRLTNYQTTELETRQAKERALAAVSAI VEGKPIHVIFSGKPGVGKSHLAISILVEVLERSAYQKYCLFVSYSELLEKLKMSMNESAK SQAKAQAYITRMKKADVLVLDDLGAELGIKNKVSTDFNNDILNRILEARQNKATIFTTNF SGKQLVEAYGTRIISRLMKHANGYVFQYKDTTDKRMRSVK >gi|237663596|gb|GG668922.1| GENE 237 232431 - 232523 194 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLTIIIGFIFWTMTLMLGYLIGEREGRKHE >gi|237663596|gb|GG668922.1| GENE 238 232516 - 232887 326 123 aa, chain + ## HITS:1 COG:no KEGG:EF1282 NR:ns ## KEGG: EF1282 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 123 1 123 123 213 100.0 3e-54 MSNLTKRKKDLFEMKSVVFKDISKQQSEKAQKRKRLLQLMNQYPDWASQKNKLIMQEIQE LGQAIGNWSMDQSRPIQSIKAASFTKSEYLYLIWLGYSDEAIRHGLDMSKECYFIYRLTL LNE >gi|237663596|gb|GG668922.1| GENE 239 232907 - 233314 589 135 aa, chain + ## HITS:1 COG:no KEGG:EF1283 NR:ns ## KEGG: EF1283 # Name: not_defined # Def: RinA family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 135 1 135 135 250 100.0 1e-65 MRTSTFNYIKDILADFYKTEEYIRQREEELRHPYQEADLNAGIRGQGLHSVVTERMAITI AMDRRLWNLERNRDIIKNCLAEADEQTRVIIEELYMKKRPSLTLIGLAQQLFISKSQAYK LRNHFFEAVADELGM >gi|237663596|gb|GG668922.1| GENE 240 233560 - 233952 456 130 aa, chain + ## HITS:1 COG:no KEGG:EF1284 NR:ns ## KEGG: EF1284 # Name: not_defined # Def: structural protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 130 1 130 130 249 100.0 3e-65 MNEAEQELYEALVAICQTSGFLLLEELPTDLPDQPFVYLGDSKELPKPTKSAILGEIELI MHVYGALSERQQISTIKGTILRQATSNLKRTAHFNWGIKHQEVKAQMVKDTKQMKKTIWH AVLPLHMQFY >gi|237663596|gb|GG668922.1| GENE 241 233965 - 234477 909 170 aa, chain + ## HITS:1 COG:no KEGG:EF1285 NR:ns ## KEGG: EF1285 # Name: not_defined # Def: major tail protein # Organism: E.faecalis # Pathway: not_defined # 1 170 1 170 170 313 100.0 2e-84 MGEVMQGKDRILLVRRLDEAATKKAMKPLFQIEHEWEFSRESSGTQTKDGVANAVSGLEV TLSLSGLASRDDENLYMKDAVEDGILMEFWDVDLKGEKNAEGKYPAIYAQGYVNSWSLPA NVEELVEIETEASINGKPQDGFATVEADIIAEAQYAFQDTVPDKAPQPGE >gi|237663596|gb|GG668922.1| GENE 242 234510 - 234869 480 119 aa, chain + ## HITS:1 COG:no KEGG:EF1286 NR:ns ## KEGG: EF1286 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 119 1 119 119 207 100.0 9e-53 MNLEINGKTIEVKFTIGAIRELDKRYQIENGAAKFGMGISSAMIYLRQYNPVILVDIMEA LQSGQLKIGKSEIEAWLMTQDVKKLSDDLLKEMGKQPLTKPMIDQFSKEAKKAEAQATN >gi|237663596|gb|GG668922.1| GENE 243 234962 - 235255 261 97 aa, chain + ## HITS:1 COG:no KEGG:EF1287 NR:ns ## KEGG: EF1287 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 97 26 122 122 137 100.0 1e-31 MSEFELRMIAFNLAEVDEERKRHELAYLNVKAQATNKKGKPVFESFKSFYDYEKRVAEVL AANQPQRTKLNERKKTQLATVAERLRRYREGRRVDGE >gi|237663596|gb|GG668922.1| GENE 244 235245 - 238178 3509 977 aa, chain + ## HITS:1 COG:BH0012 KEGG:ns NR:ns ## COG: BH0012 COG5412 # Protein_GI_number: 15612575 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Bacillus halodurans # 610 976 137 509 509 127 29.0 1e-28 MENDKEKTPLSEAKKSLAGVQQALKSMSGEYALLSGYLGKISAGVNQSATVMNTFKTVMQ QSGETVKKTGDETAKAADQMNTALTDSAEQAGEAAKKAGKETSDGFTNAQNNMLSFGTAM TSAVSLPMLNVLKTAMGVGAGVSGEFQGMQGLIMASAGGISDSLQGELQGALTQMNQSFE AAAQVIQSVMAPGMEILVQVVITVVKGITALVNLFIKLPKPVQVFIVAIMGILAAIGPML IMVTMAQLKFQQFSAGLALVQGNIGKLGGGLSKLSASFSALGGGPLILIVAAVLAAVAAF IYFYKTNETFRNSINSLASAIQGAVSAAFGKLVGLLQQIQPAFQQVMAVFKQFFAVGLEK MATIFSTIGRVLAGVFASGLQLGSNLLGQFGGTFDKAGLAVGLLVKVLTKVALAALGISG PFGLIISLIVSFVTAWMKTGDLSAGGITQVFDNLGNTITSVTTMLATNLPKVIQLFTTVL TSILGKITEAIPSIVTALSSLITLIVGAIVANLPVLIEAATQIITTLIQGITTVLPMLIE VGLSLLMTLVNAIVTALPTITTAAINIITTLVTAFVTALPMLVTAGVSIITALVNAFVTM LPLILTAGLQILMALITGIMTILPQLIQSALTIILALVTALIGALPQIISAGVKLLMALI QGIISILPTLVAAAITLILTLVNALIGALPQIISAGVKLLMALIQGIISILPQLVTAAIT LITALMGALINALPQLLSAGIQLIQALINGVLSLLGALLSAAGTLISQMITKIGSYFGQL LASGGQLVENIKNGVTNAANQVKNAIGSVIEGAWQAIQGWFSKFTDAGANIVGMIADGIT GAIGKAKEAIDGVVSKIRNFLPFSPAKEGPLSDLHKLNFGGTIATGIYAGETAVSRAMAS ILDLPLLNDFALDLAGRGNFTATIDHRLENDAYNRPLFVTVESTLDGKVVAATTAPYLAT ELQRQQVKQNNRLGRRG >gi|237663596|gb|GG668922.1| GENE 245 238180 - 239106 1216 308 aa, chain + ## HITS:1 COG:no KEGG:EF1289 NR:ns ## KEGG: EF1289 # Name: not_defined # Def: tail protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 308 1 308 308 622 100.0 1e-177 MYKFVDTNQATHSTPLPSEALNFNGQFLEKVIPGYQTLSVSGRELVPSEIESYQLGIRDG KRHVYARIPERELTVKYRLSAVNNEAFRDAFNHLNVALFTEKDVSIWFNDEPEMLWFGSK SSVSDVPEGVNQVTGTFTLLLSDPYKYTRSDATSVMWGSPTITFQANYLMGNTGSGAFDF PILIEGGAYWGSTMITFQNRAYTMGDLGKEVRPIEIYPTVEGLKVKPTIILTGTGRGVWI KTRNDTINLGDFDRSEIIIDTENFYLTKNGAPMIRPMNDFYLYPNEPLYIQAKDSDFRLT IRYPNRFV >gi|237663596|gb|GG668922.1| GENE 246 239119 - 240576 1276 485 aa, chain + ## HITS:1 COG:no KEGG:EF1290 NR:ns ## KEGG: EF1290 # Name: not_defined # Def: structural protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 485 1 485 485 964 100.0 0 MLMALDLKRTYTAILDNAYQVSYEKIENKIGSLDFTMPLDDPKNEFIAEMQWVELTDNEN EYIGLYRVMPTTIKKDANNNQIHYSATEALCTLGDTVLFGCHEIKNKTTKEAIQFLLNKQ KTKHWVLKKCDFSRKLTYKWENENGLVEPLFSIPADFEEEYLWQWNTEVYPFELSLVKPP TEPVARIQEGYNMQGFEIERNPKMLINRIYPLGSGEGVNKVNIRSVNQGVPYLENKAAID RYGLLESIWVEQRFSDPKALKENALRMLEEWTKPQVSWVVTAADLIKLTDQPLAIDRLRL GTVIMINTNEFGSVNLRIKKESKKDVFGAPQDIQLELGNLQETIHSTMTAFSRKQEINET YAQGATTLLNRSIQGELSKTQPVELNLYFDEDILYINTAELTFKATAKGPSHSVTNIDLV VDGKKLPQLSLQQQRLNILSYLRKTTDEKIERGNHTLQFFSHQPLWLDASVICRVYIQSQ LGGQF >gi|237663596|gb|GG668922.1| GENE 247 240609 - 242378 1732 589 aa, chain + ## HITS:1 COG:no KEGG:EF1291 NR:ns ## KEGG: EF1291 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 589 1 589 589 1064 100.0 0 MSVEHIEELDTLNQGRLKINAILDQSNASAEKVDAYQVQLTNGISEAKNIADEAGKEAVQ IATDAGNQANETANQAMNNAKTAIMIAGNAVSTANNNKQEFDTLRNDFDQLVAEAGDSNP EIVQARTDTQGIKQATLANRLQIDLNDRMTKADGISLLAKPTTVKMKLDFNGKTAGNTAT NANSYSTDFTAKILKKPTEVWEEVSQADYNKMASRDDEGVKTGSTQSGVIPQQLAAFNLV EAAKKLIPQMFETVTTDEAVAFIRQNVQFFTINQRVKAAAPNNQTIKIATYLPTTDNWVT QIQESAKEFGDFSIQINDQNFITDEGFIYLMSYTDSSNGVTPASLEVDYVGLHIGLSVDA QAVLAKSGFVQAEQLNTHMENQDNPHQVTAEQVGLGNVENYGFASDSEAVAGTLTSKYMH PKNVAEAIKGQAVTQTGDQEIAGVKNFVTMPTVNGVPLESSRMAIYEASGVGEVEAKYQA AFNKDNMKFVLIRVGNRVDAFVRCNLSDPTKLNNNLVKVFTVPTGYTLSTKITKGIWNLA LTAMQYTFPQPNCAGLYEMGNQGILFGANRAGNIYLQGSWYTDDPFPTK >gi|237663596|gb|GG668922.1| GENE 248 242402 - 242797 432 131 aa, chain + ## HITS:1 COG:lin0175 KEGG:ns NR:ns ## COG: lin0175 COG4824 # Protein_GI_number: 16799252 # Func_class: R General function prediction only # Function: Phage-related holin (Lysis protein) # Organism: Listeria innocua # 15 124 12 122 140 66 36.0 9e-12 MERYLNTITMLLSIFGGIVVRLLGGLDQLLDVFLFLIIVDFITGWIKAIATKELSSRIGM LGIAKKVTMLFVVAVAVRVEKVVGNNLPIREMVLIFYIANEGLSFFENIATFIPMPKKLK ELFIQLKNKDD >gi|237663596|gb|GG668922.1| GENE 249 242943 - 244040 1287 365 aa, chain + ## HITS:1 COG:SP1937 KEGG:ns NR:ns ## COG: SP1937 COG5263 # Protein_GI_number: 15901761 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 50 200 26 177 318 83 36.0 8e-16 MFKKLMIQLALVIGLSLTIPMTACAYTIEADPINFTYFPGSASNELIVLHESGNERNLGP HSLDNEVAYMKRNWSNAYVSYFVGSGGRVKQLAPAGQIQYGAGSLANQKAYAQIELARTN NAATFKKDYAAYVNLARDLAQNIGADFSLDDGTGYGIVTHDWITKNWWGDHTDPYGYLAR WGISKAQLAQDLQTGVSETGETVIIQPGKPNAPKYQVGQAIRFTSIYPTPDALINEHLSA EALWTQVGTITAKLPDRQNLYRVENSGHLLGYVNDGDIAELWRPQTKKSFLIGVDEGIVL RAGQPSLLAPIYGIWPKNTRFYYDTFYIADGYVFIGGTDTTGARIYLPIGPNDGNAQNTW GSFAS >gi|237663596|gb|GG668922.1| GENE 250 244194 - 244319 143 41 aa, chain + ## HITS:1 COG:lin1365 KEGG:ns NR:ns ## COG: lin1365 COG0130 # Protein_GI_number: 16800433 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Listeria innocua # 1 36 1 36 304 75 88.0 2e-14 MDGILPLWKERGMTSHDCVFKLRKILHTKKIGHGGTPETPS >gi|237663596|gb|GG668922.1| GENE 251 244624 - 245370 787 248 aa, chain + ## HITS:1 COG:BH2410 KEGG:ns NR:ns ## COG: BH2410 COG0130 # Protein_GI_number: 15614973 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Bacillus halodurans # 1 248 61 302 304 218 45.0 6e-57 MVDSGKTYEGEITLGFATTTEDVSGEIVEKKLVTAPLSTEQIDQAMAEMTGEITQIPPMF SAVKVNGKRLYEYARNGEEVERPQRKAMIYSFERTSEPIFNESAHTQSWRFKVVCGKGTY VRTLSVDTGKKLGYPAHMSDLTRTASGGLQAAQCLTLEEVAKQMAAETIDQCLLPIETAV EQFPRIDLSDELYQKVKNGMRLHKKELGIKAMPESLVALFYQNQVVSLYMPHPTHDKLLK PSKVLRNN >gi|237663596|gb|GG668922.1| GENE 252 245396 - 246346 613 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 1 310 1 312 317 240 41 8e-62 MQVIQLHHPYEPNQIPNEEVVMVLGFFDGVHKGHQKVIETGKKIAEEKGLKLAVMTFNQH PSIVFQKVLPENMKYLTSLEQKERLMANLGVDILYIVEFTSAFAQLKPQDFVDQYIVNLN SAVAVSGFDYTYGPKEIAGVKQLPTYAQGRFEVVTVPKEEMTGAKISSTRIREKMEAGEM EEVTELLGYIYETEGTVVHGDARGRLLGFPTANVKVKSTVRLPRIGVYAVQIEVGGKWYV GMGSIGHNDTFGEGRDLTVEVYILDFHQDIYGEQVVVRWNHYLRDQVKFNGAEALIDQLK QDERDTADYFQQSEDK >gi|237663596|gb|GG668922.1| GENE 253 246346 - 246942 602 198 aa, chain + ## HITS:1 COG:MA1701 KEGG:ns NR:ns ## COG: MA1701 COG3153 # Protein_GI_number: 20090553 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Methanosarcina acetivorans str.C2A # 1 198 17 207 217 119 34.0 4e-27 MKIRQEKPAEYQAVERLTYQAFKELNLTENWRPTEHFIVHLLRESADFIPELSLVSETDQ GKLTGHIMSSKAKLRLPDHTEKAVLTVGPLSVHPEAQNTGVGSALIKHSVQKAKELGIGG LIILGHPTYYTKFGFVPATTFQITLPEKETSEALLALELLPGYFGTSGGEWHFSTCFAYP ETHPAELEAFEAELGINE >gi|237663596|gb|GG668922.1| GENE 254 247092 - 247433 307 113 aa, chain + ## HITS:1 COG:lin0727 KEGG:ns NR:ns ## COG: lin0727 COG1695 # Protein_GI_number: 16799802 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 4 103 5 104 110 115 63.0 2e-26 MKQTELLKGILEGLVLAIIQRKETYGYEITKILNDQGFTEIVEGTVYTILLRLEKNQWVI AEKKPSEKGPMRKFYRLTSSGEAELADFWQRWTLLSKQVNKMKKNGGIEHVKF >gi|237663596|gb|GG668922.1| GENE 255 247420 - 247761 468 113 aa, chain + ## HITS:1 COG:lin0728 KEGG:ns NR:ns ## COG: lin0728 COG4817 # Protein_GI_number: 16799803 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 14 108 11 104 107 73 39.0 1e-13 MSNFKALIKKVVGDKKEYKEYKRRIAALPVEYRQVFQEIEKYAWHFSDHSGANMFNALTD LLDLFEEGAANGTPIKNITGEKVGDFAETIVNEVAGKWTDKQKEKLNHQFSKQ >gi|237663596|gb|GG668922.1| GENE 256 247787 - 248047 334 86 aa, chain + ## HITS:1 COG:no KEGG:EF1299 NR:ns ## KEGG: EF1299 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 86 1 86 86 129 100.0 4e-29 MVENFFKEGKLLVIPKKNAKKVQVFQRVANQFEFGKEYTEKEVNQRLREIYEDYALLRRY LVDYQYLERDKFGKIYQKCEQHTKII >gi|237663596|gb|GG668922.1| GENE 257 248206 - 249381 948 391 aa, chain + ## HITS:1 COG:SPy0609 KEGG:ns NR:ns ## COG: SPy0609 COG0772 # Protein_GI_number: 15674690 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Streptococcus pyogenes M1 GAS # 11 378 23 405 434 208 36.0 1e-53 MNLRTLGLTKILLTFIILSIIGALMIYSASSYDLLMQGVKPTAVFIKQGIIMCLSWVLMF VIYKVRLEVLFNKKIAIGLLLVSVLLLLMVRLPFFGVAANGAQRWISLFGIQFQPSELCN FAIIYYLSCYLGEKENGLTTKQLRKQWLFVLVVAFLVLIQPKVGGAILILVIGSVLIFSA SIHAKFSVIAAGIVVASAALLSKIIIFLGDHRYLPHFFAHVYDRLVVLKNPFLSFHDRGF QPSMAYLAMYNGGFWGTGLANGMVKKGGLPEGQTDFIFAVIVEELGLIGGLLLLFLLLFL AASILRSSCVIKNHCYGLFLLGVGTLILAQTAINIGGVLGLIPMTGIPLPFVSYGGTSYL IFSVALGIVIKIIANERRQLNGQYKKIQLTS >gi|237663596|gb|GG668922.1| GENE 258 249347 - 250420 800 357 aa, chain + ## HITS:1 COG:L115706 KEGG:ns NR:ns ## COG: L115706 COG0772 # Protein_GI_number: 15672878 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Lactococcus lactis # 3 357 7 363 414 225 38.0 1e-58 MVNTKKFNLHLNYDLLLPIFLLTLLSSGVQYWIAVNEGKDGTVPALKQLFFIFVGYAGMF LASRLSQKFIWKVAPFFYGFSLILMSALYFSYDKGMYLLTGTKRWLDLGFIKFQPSEIAK IAFILMLAKIIVQHEQQDWSDKWRSDKQLLKKIVAVSVPVFFLMAVQKDFGTSLVFVTII LSLLVISGIDRKILIIIFSALATLGVVLILLVFTEWGHKVLFFLHFKQYQLDRILAWIHP YDYVDKISYQQVQGLLAIGSGGLFGKGVHGIEVYVPVRESDMVFTFIGEAWGFVGSATVV FLYFYLFYQVLVAGLRSNSRFCMYICVALIFSLVFQTVENIGAVIGLLPLKGIPFRF >gi|237663596|gb|GG668922.1| GENE 259 250556 - 251443 795 295 aa, chain - ## HITS:1 COG:ECs0391 KEGG:ns NR:ns ## COG: ECs0391 COG0583 # Protein_GI_number: 15829645 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 6 244 6 241 299 84 27.0 3e-16 MELFRLHYFLELCKVKQFTKAAENLAISQAALSKQIKILEATLGAELFNRQGQTTTLTPA GLILEKYCWRITNELVSIEEELKEINHSSNHIYVATYLCDLEYKLNDLLMTTLTDRSSNL QVHTIITENILQSLETMDADFGISFADLPLPEHIGKIDLFTANYQFILRNDHPALAKATT EEILKELTMYPFVRLNTEFSEQNKLTNWLDTTFSNFSPEKVIQVDTLSLITHLVSHSDSF AIVPEYTNIQLLDNSIHTLTYQELPKRNMAVYYLKERYMSRQLQQLLAECQKQFQ >gi|237663596|gb|GG668922.1| GENE 260 251467 - 252342 810 291 aa, chain - ## HITS:1 COG:cynR KEGG:ns NR:ns ## COG: cynR COG0583 # Protein_GI_number: 16128323 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 247 1 247 299 94 29.0 2e-19 MKLQQLEYFMAVSKYASFTLASQKLHTSQPYLSTQLKELERELGASLILRDKKHCRLSPA GEVVAKRTEMIFALIKEAQEEINELVTQGSTTTIRIGTNLIDIDKAFGEVLLLFNQSYPY VSIDFKYYYDLETALETDLIDIGIGIFLDTSIPLEKELIYTESYLLCVNKNHPLAHADSV TIDEIRSLPFAAYSDQVYEKKVFKRWERKINWENRQIVIELPSLHLVLDMVQREKACSIL PYSLTDELNRRNLVGIPLEDSPERAIYLVQNNHHGHCEAHRYLFEQLRYLF >gi|237663596|gb|GG668922.1| GENE 261 252821 - 252910 98 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEDEPIVNSSQPQINEVKENGKENASLGP >gi|237663596|gb|GG668922.1| GENE 262 252879 - 255539 2478 886 aa, chain + ## HITS:1 COG:L85514 KEGG:ns NR:ns ## COG: L85514 COG0474 # Protein_GI_number: 15673239 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 20 886 33 910 910 922 53.0 0 MEKKMRHLGHDYSYKKFAHSEVEKVLQRFGSTWDGIKHQDIEELQERYGRNKIMNEKKAS RLRLFIKSYITPFTLVLLALATISFFTEYVYAAPEEKDVTGVLIMLAMVILSGTMSFVQS VKSSNAVEKLQNMIKVTATVIRDKKQMEIPIEEVVCGDLVQLSAGDMIPADLRLIQSKDL FVSQSSLTGESFPIEKHATHQKDSDQIDTEYDNLLFLGTNVISGTGLGIVIKVGNQTLFG RMASDNGEEQQQTSFETGINKTTWVLIRFMLVITPTVFLINGLTKGDWAEALMFAIATAV GLTPEMLPMIVTTNLVKGSREMAKEGTIMKNVNAIQNFGGMDVLCTDKTGTLTQDKVILE YHYNIGCQEDQKVLDLAFLNSYFQTGLRNLMDNAVIQAATQESDIQSDDFYKVDEIPFDF NRRRMSVIIKEFKTRETRLITKGAVEEMLLVCTQVLLNGEIVPLTETLRQKITKDVEALN RDGLRVLAIADKKVEAAEWEYTTKDESELILQGYLAFLDPPKETAAAAIHALHQHNVAVK VLTGDNQYVTHSVCKEVGLAGEKIITGNELQQLNQEELRKTVQAYNIFAKITPDQKVRIV NALTENGQTVGFLGDGINDAGAMRAADVGISVDTAVDVAKESADVILLRKDLMVLEKGIL SGRRVFTNTMKYVKLTASSNFGNVFSVIPASIFLPFLPIAPIQSLLLNLIYDTSCMSVPW DKVDEEYVEKPKKWEPKSIGNFMRWFGPTSSIFDIVTYLFMYFIVCPAILGGSFFELNGA DQLLFIGIFHAGWFIESLWSQMLVLHFLRTEKMPFLQSSASGIMTLVTTAGIVLGTVLPF TAFGAELGFVGLSPSYFLYLIPTIVAYLALVAFIKVLYVKRYGQLL >gi|237663596|gb|GG668922.1| GENE 263 255747 - 256931 1175 394 aa, chain + ## HITS:1 COG:lin1513 KEGG:ns NR:ns ## COG: lin1513 COG0635 # Protein_GI_number: 16800581 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Listeria innocua # 17 389 13 385 385 426 54.0 1e-119 MTKTNQLSTSTPMFDRSAYIHIPFCEHICYYCDFNKVFLEGQPVDEYIQSLLKEIQLTQA LYPEQEMKTIYIGGGTPTSLSAKQLDVLLKGVREQLTFDDRNEFTVEANPGDLTQEKLQV MKNYGVNRLSMGVQTFDDRLLKKIGRKHTAADVYETMKFLEKENFTNVSIDLIYALPGQT LESFRDTLTRALALDLPHYSLYSLILENKTMFMNWVRQGRLQLPEEEIEAQMFDETIEAM EKKGRHQYEVSNFALTGKESQHNLAYWNNDHYYGFGAGASGYLGQTRYKNHGPIQHYLKP LRENQLPIVETEELTRLNQIEEELFLGLRKKVGISKQKFQQKFQEPIEAIYGEVIQRLIK EELLIEEADILRLTKKGLFVGNNVFEAFLLSEKE >gi|237663596|gb|GG668922.1| GENE 264 257157 - 258200 1165 347 aa, chain + ## HITS:1 COG:lin1512 KEGG:ns NR:ns ## COG: lin1512 COG1420 # Protein_GI_number: 16800580 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Listeria innocua # 1 343 1 341 345 265 40.0 9e-71 MITERQQNILRLIIQNYTNTGLPVGSKKLMEDGIASSSATIRNDMKALEEYGLLAKTHSS SGRIPSMAGYRYYVDHLLQPTQVEENELRRIRQSFGKEFHEINDIIRQSAEILSELTSYT AFSLGPEVKERKLTGFRMVPLNDRQVLAIIVTDKGNVENQVFAIPAAVSSQDLEKMTQII NDKLVGQPLLTVYHRLRTEIPMILHRYFQTPEGMMNLFDEMLGHAFEEKVFVGGRMNLLD FGIKQDIEQLKSVYSFMQNSDELTHLLNGSATTENPIVFRIGSEIGNNLLEDMSMITATY EVSGHGKGTIALLGPTSMPYSKIFGLVDTFRHELASQLGDYYRFLGN >gi|237663596|gb|GG668922.1| GENE 265 258255 - 258794 834 179 aa, chain + ## HITS:1 COG:SP0516 KEGG:ns NR:ns ## COG: SP0516 COG0576 # Protein_GI_number: 15900430 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Streptococcus pneumoniae TIGR4 # 25 177 24 172 174 132 55.0 3e-31 MSKKEEKQEELQEEMEAVDAAGVSEVEVEATEIENLKAELSEMEDKFLRARAEIANMSNR NKNERELLVRYRSQDLGKKILPSIDNLERAMAIEVSDEQGESLKKGISMVLESITVALKE EGIEEIPAMGETFDPNLHQAVQTVPASEETPADTIVEVLQKGYKLQDRVLRPSMVIVAQ >gi|237663596|gb|GG668922.1| GENE 266 258854 - 260683 2484 609 aa, chain + ## HITS:1 COG:BS_dnaK KEGG:ns NR:ns ## COG: BS_dnaK COG0443 # Protein_GI_number: 16079601 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Bacillus subtilis # 1 607 1 607 611 857 81.0 0 MSKIIGIDLGTTNSAVAVLEGGEAKIIANPEGNRTTPSVVSFKNGEIQVGEVAKRQAVTN PNTISSIKRHMGEAGYKVDVEGKSYTPQEVSAMILQYLKGFAEDYLGEKVEKAVITVPAY FNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKDEKILVFDLGGGTFDVSIL ELGDGVFDVLSTAGDNNLGGDDFDNKIIDYMVAEFKKENGIDLANDKMALQRLKDAAEKA KKDLSGVTSTQISLPFITAGEAGPLHLEMNLTRAKFDELTSDLVERTKVPVRQALKDAGL NPSEIDEVILVGGSTRIPAVVEAVRKETNKEPNKSVNPDEVVAMGAAIQGGVITGDVKDV VLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAA DNKTLGRFQLTDIPAAPRGVPQIEVSFDIDKNGIVNVRAKDLGTQKEQTITIKSSSGLSD DEIERMVKDAEANAEADKQRKEEVDLRNDADALLFTVDKTLKELEGKVDAEEVKKAEDAR DELKAAIEANDIEQMKAKRDSLNEIVQNLTVKLYEQAAQQQAQENPEAAQGGADDVVDAD FEEVNGDDK >gi|237663596|gb|GG668922.1| GENE 267 260798 - 260920 118 40 aa, chain + ## HITS:1 COG:no KEGG:EF1309 NR:ns ## KEGG: EF1309 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 40 1 40 40 62 100.0 5e-09 MKELWYDYNDVKQAENTYSQLVTLIQGVTDNPTRETESNR >gi|237663596|gb|GG668922.1| GENE 268 260975 - 262144 1543 389 aa, chain + ## HITS:1 COG:L0272 KEGG:ns NR:ns ## COG: L0272 COG0484 # Protein_GI_number: 15674206 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Lactococcus lactis # 6 380 5 379 379 474 71.0 1e-133 MATKRDYYEVLGLAKGASDDEIKKAYRKLSKKYHPDINKEADAEEKFKEVSEAYEVLSDP QKKAAYDQYGHAGTDPNYGGGAGGFGGFGGGGFSSSGFGGFEDIFDSFFGGGGGRSVDPN APRQGADLQYTIQLKFEEAIFGVEKEIKYNREDTCATCGGNGAKPGTHPETCHKCHGSGT INVERQTPLGRMMSRQTCDVCHGTGKEIKEPCPTCHGTGHEKKAHTVKVNVPAGVEDGQQ MRLANQGEAGTNGGPYGDLYVVFRVEDSDIFDRDGAEIYYDLPVSFVQAALGDEVTVPTV HGDVKLKIPAGTQTGTNFRLRGKGAPRLRGGGNGDQHVKVKLITPKNLNEEQKDALRAFA KAGGQNVTEQQEEGFFDKMKDAFGGKKKK >gi|237663596|gb|GG668922.1| GENE 269 262383 - 263117 748 244 aa, chain + ## HITS:1 COG:lin0658 KEGG:ns NR:ns ## COG: lin0658 COG0639 # Protein_GI_number: 16799733 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Listeria innocua # 1 235 1 235 235 194 40.0 1e-49 MKPYVYVISDIHGQADLFDALLTDYDPVEHQLVLIGDLNDRGSDSKACFLKGKELVEQHG AVYLRGNHEEYFLQFLQNPEDWFAGYVRNGGKETIESLLHPGATAEYSPTEMALMIRSRY PELIDFLTKRPLYFEWQHYLFVHAGVDLTMEDWRQTAPKDFLWIREPFHQGKNNTGKTIV FGHTITPMLHGDMQTTDLWQSDGKIGIDGGAIFGGSVHGVIFNEKGIVQDIEYQKRTPAW QPEF >gi|237663596|gb|GG668922.1| GENE 270 263215 - 265407 195 730 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231694|ref|ZP_04356122.1| SSU ribosomal protein S1P [Cryptobacterium curtum DSM 15641] # 651 720 204 272 403 79 60 2e-13 MAEAYNEEVVALLQKELTTYRSKQITTVLTLLNEGNTVPFIARYRKEMTGSLDEVQIREI EERYHYLQNLKKRKEEVLRLIEEQGKLTKELKTDIQKAVKMQQVEDLYRPYKQKRRTKAT IAKEKGLEPLADWLLSLPENADILAKAATFINEEKEVATAEIALQGAHEILAERISDEPK YRIWLRDYMVKHAQYVSVVKDEEKDEKRTYEMYYDFAEPVSKMVPHRVLATNRGEKEDIL KVSLVADETKINDYFQRQLIGKQATSLAAPYIEAAYLDSYKRFIGPAIEREIRNELTEKA DEQAIAIFGENLRNLLLQSPLKGKVVLGFDPAYRTGCKLAVVDETGKVLAIQVIYPHKPA TAAKREAAGPAFKKIIEDYQVDMVAIGNGTASRESELFVAEQLKAVKRDVFYVIVNEAGA SVYSASEVARKEFPDLQVEERSAVSIARRLQDPLAELVKIDPKAVGVGQYQHDVSQKRLA EQLDFVVETAVNQVGVDVNTASAQLLQHISGLNKTTAQNLVTYRDENGVFTARNQVKKVP RLGPKAFEQAIGFLRIPNGKNVLDNTGIHPESYPVAQAILEKAEIASKELGTAEAIEKLK QLPVNQLATELEVGSETLTDIIASLIQPGRDMRDEMSAPLLRKDVLTMEDLKPGMEMQGT VRNVIDFGAFVDIGVKQDGLVHISKLSTKFVKHPTDVVAVGDVVTVWVEDVDLKKGRISL TMLPRADRKE >gi|237663596|gb|GG668922.1| GENE 271 265410 - 265895 326 161 aa, chain + ## HITS:1 COG:SPy0581 KEGG:ns NR:ns ## COG: SPy0581 COG3091 # Protein_GI_number: 15674669 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 14 152 3 139 145 146 50.0 2e-35 MKESQPVLMTDQALQTLVEKISIVFFQKPFLHQATFNRRLKTTGGRYHLASHHLDFNPTV FLKYGQEELEKVIKHELCHYHLHLAGKGYQHKDKDFKELLAKTGGARYAPPLVERKKAVF HQYQCQSCGEVILRKRRIDTTRYVCGKCHGRLSWQAKKEQI >gi|237663596|gb|GG668922.1| GENE 272 266446 - 267663 1113 405 aa, chain + ## HITS:1 COG:L162604 KEGG:ns NR:ns ## COG: L162604 COG0436 # Protein_GI_number: 15672142 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Lactococcus lactis # 1 404 1 404 404 669 76.0 0 MRNFKKSDKLNNVSYDVRGPVLEEAERMQEEGIRILKLNTGNPAPFGFDAPNEIVRDMIV NVRDSEGYSDSKGIFSARKAIEQYCQLKKFPNVTINDIYTGNGVSELITMCMQGLLNNGD EVLVPMPDYPLWTASVSLAGGTPVHYICDEQAEWYPDIDDIKSKITSNTKAIVIINPNNP TGALYPKELLLEIVEVARQNDLIIYSDEIYDRLVMDGLVHVPIATLAPDLFVVTLNGLSK SHRVAGFRCGWMVLSGDKSRVKGYIEGLNMLASMRLCSNVLSQQIIQTALGGYQSVDGLL LPGGRIYEQREFIYNAINDIPGLSAVKPKAAFYIFPKIDTAKFDIYDDEKFVLDFLHKHH ILLVHGGGFNWQQPDHFRIVYLPKMEDLKTTADKMREFLSTYKQK >gi|237663596|gb|GG668922.1| GENE 273 267729 - 267905 306 58 aa, chain - ## HITS:1 COG:no KEGG:EF1315 NR:ns ## KEGG: EF1315 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 58 1 58 58 93 100.0 3e-18 MAEEKKVHFIWEKTNYSGFVEKEYENSYLIVVANPSPDMEEKYTNRMIISKKACETAE >gi|237663596|gb|GG668922.1| GENE 274 268083 - 268910 928 275 aa, chain + ## HITS:1 COG:no KEGG:EF1316 NR:ns ## KEGG: EF1316 # Name: not_defined # Def: Cro/CI family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 275 1 275 275 493 100.0 1e-138 MNSLGAVIKEIRKNRKLTQKMLSEDICSQSVLSRIENNEELPNVLVMQQLCDRLGVTVDQ IMRYKSGDVHVVTYSFEKMAEYFRHKKYQLLLNYLKENRIEEQLYLDTDWQKYYYYLGSC ELFVLNDYEKAIASLRKGLSFTYKADKLNVSDLEIQLISCLGATYGYMGNRVEAERFLSL SIHYFNQLPNERSNAELTKIFFNYADFLFKNYTEKDAEIYVDQGITWARKKNSYYYLSEL LNLKYLVLMRKNKHEEAERYLNLAQQMKNVESGNL >gi|237663596|gb|GG668922.1| GENE 275 269011 - 270159 1556 382 aa, chain + ## HITS:1 COG:SPy1694 KEGG:ns NR:ns ## COG: SPy1694 COG1820 # Protein_GI_number: 15675552 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Streptococcus pyogenes M1 GAS # 1 382 1 382 382 484 63.0 1e-137 MKTFIFADKFFLKSDVKGPGYLEITDGIFGNYTKDEPQGDVKIIREEGKWIAPGLVDTHI HGYMNHDVMDNDAEGIKVMSEGLLSCGVTSFLPTTLTSSKERLTDVARTIGQVYQEVPGA KIQGIYFEGPFFTEEHKGAQNPSYFGDPDLDTFHEWQEASGGIIKKIALAPERNGVKEFV ETVTDEGVVVALGHSNATLEEADVAVEAGASVFVHAYNGMRGLNHREPGMVGALLTLQHV FSELICDGHHVHPQAAEVLMEKAGHDHVALITDCMMAGGMPDGNYNLGEFPVVVAEGTAR LDTGNLAGSILKLKEAIKNVVDWGIATPAQAIMMASLVPAISCKIDDQCGMIANGRDADF IVLEPTMELAATYLDGVERYRA >gi|237663596|gb|GG668922.1| GENE 276 270202 - 270588 611 128 aa, chain - ## HITS:1 COG:no KEGG:EF1318 NR:ns ## KEGG: EF1318 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 128 1 128 128 197 100.0 1e-49 MDFEQLKETLPDAKPQTFLQAILSQPQEEDAELTFSEEIDEQFVENCKFLASPETISETD VEHWREQEFLVVAQSLDGDYLAGTLEQTFVIPSSLYKEDIEQFDKQLIDFFIAYENKEIT SAILPKEL >gi|237663596|gb|GG668922.1| GENE 277 270602 - 271261 707 219 aa, chain - ## HITS:1 COG:no KEGG:EF1319 NR:ns ## KEGG: EF1319 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 219 1 219 219 380 100.0 1e-104 MANRKKKPPFNSTIMLIGALIILILGAVGVKVPDALQDLFNVQPQTTTPSSTPAPKGDNP GPIENGKATFSAEELKDNSNGWITYHSLDRLKRATGADALLKPAMVNTGTSANKDIRPAG FISGKANHSRGHLIGRQMGGSGDDPRNLTTLYQNPVNTPYMTKYENQIRAALNRGETVRY RVTPVYNGNDLLAEKIILEAKSLKTNSPIDFSVTILNKQ >gi|237663596|gb|GG668922.1| GENE 278 271422 - 272123 344 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 218 2 219 245 137 37 1e-30 MAYIEVKNEYKRYQMGETTITANDGISFEVEKGEVAVILGPSGAGKSTVLNILGGMDSCD EGEIIIDGTDIAQFSEKQLTTYRRNDVGFVFQFYNLVPNLTAKENVELASQIVADALDST NVLQSVGLGERLDNFPAQLSGGEQQRVTIARAIAKKPKLLLCDEPTGALDYETGKQILTI LQNTARETGTTVLIITHNSAIAEMADRVIRINDAKVREMTVNDQPKLVAEIEW >gi|237663596|gb|GG668922.1| GENE 279 272133 - 274769 2233 878 aa, chain + ## HITS:1 COG:L111162 KEGG:ns NR:ns ## COG: L111162 COG0577 # Protein_GI_number: 15673086 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Lactococcus lactis # 8 876 7 894 896 583 37.0 1e-166 MKKTALIKTSLREIRQSTTRFLSIMGIIFLGVMVFVGLKATGPDMIKTANNYYQKEQLPD ARIISTMGLEKKDLTTLQSLKDVETVVPRYTIDATIGPQNNAVKLFGYRKNQAGSVNYQV VDGRLPKQTNEIALDTLAKTRYDYKMGDKITLNDAAIKEKGLKQTHFTVVGFINSPEYID NTSRGTTTVGSGTLNFFGVVSEKAFDSQRYPELLISFRSLKHQNTYSSDYEKKREQALNQ VKEALKNRPEEQVAALRDSAQPDINQGRQALETGKQALAQLEQQPGIPAEMLEKQKDELA KQEQLLAEKETELANLKAPTYYYFTREDNPGFSEYQDNADRISSLATLFPLFFFLIAALV SLTTMTRMVEEKRMEIGSLKALGYRNREIASIFITYATVASLTGALLGLAVGYYLFPKII FDAYGQMYNIPDLVTPWYLNYSLWGIIVALACTVGAALVTLRIDLLSTPATLLRPKAPKA GQRILLERIRPLWQRMSFIQKVTARNLFRYKRRMLMTVIGIAGCMGLLIVGFGLRDSIVD VATIQFNKIWHYQAVVTFKEQTTPEETKEYQETLRKMDGLNKTIPLYSEIFKTKGKGAPT QNITLYVPQDPSKMADFQLFNDRVTGEKYSLNDDGVIINEKLAKLFGYKVGDQLNLENSD NQTYHVKIAAIAENYTGHFVYMTPKLYQTMTKQKPEYNTEFLLFDKKLSSKQETSIGEAL TKQPKVLNITFLTAMKGSFDDMLKSLDIVIWVLIAVSGSLALIVLYNLTNINVSERIREL STIKVLGFYDREVTTYVYRENIILTFIGIIVGCFFGKILHQYILATVEVDLIMFSPIIHW PSYLYSAVITMCFTLFVMVIMHRKLKKINMIEALKSNE >gi|237663596|gb|GG668922.1| GENE 280 274962 - 275486 587 174 aa, chain + ## HITS:1 COG:no KEGG:EF1322 NR:ns ## KEGG: EF1322 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 174 1 174 174 305 100.0 5e-82 MLEGLPLETVYFYALVGSAVLAFLLIIFGDVFNFDGPVDPMLIIPWIAFTSLFGYLGEEL TAVNSWLILIVSGILSTIIVFFLNFYVLVPLKNSEATISISEKDMEGRVATVITPIPVRG MGEIQLKSVTGSLSRPAAFYVPQEVAAPRGSEVLIIELKERVCYVIPYEGSLKI >gi|237663596|gb|GG668922.1| GENE 281 275503 - 276972 2149 489 aa, chain + ## HITS:1 COG:BS_yuaG KEGG:ns NR:ns ## COG: BS_yuaG COG2268 # Protein_GI_number: 16080153 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 473 3 486 509 532 68.0 1e-151 MGILLPIIIAVLVLLMLLIVFVSKYQTAKPDEALIISGSYLGSKNVHVDEGGNKIKIVRG GGAFVLPVFQRSNRISLLSSKLDVSTPEVYTEQGVPVMCDGTSIIKIGSSVEEIATAAEQ FLGKTTEELENEAREVLEGHLRSILGSMTVEEIYQNRDKFSQSVQEVASVDLAKMGLVIV SFTIKEVRDKNGYLDSLGKPRIAQVKRDADIAEAEALKETRIKKAEAEKESQQAELQRQT EIAEASKEKELKLALYKQEQDIAKAKADQAYNLESARAQQHVVEQEMEVKVVERQKQIEL EEKEITRREKQYDSEVKKKADADRYAREQEALAQKAREVAEAEAERFKVEALAEAEANKT RLTGQAQAEAILARGAAEAEAKQKIADAFKEYGEAAVLSMVMEMLPQLMKEAAQPLGNID KISVVDTGAGGENSGANRITNYATNLLAGTQETLKETTGLDVKELIENFSKKGTSNSVNY HATEGSEKE >gi|237663596|gb|GG668922.1| GENE 282 277119 - 277352 378 77 aa, chain + ## HITS:1 COG:no KEGG:EF1324 NR:ns ## KEGG: EF1324 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 77 1 77 77 119 100.0 3e-26 MSKKNKDIEVRVEEEKAQYNGANVLMNKLFIGKKEIGRVIPQNDKKFIIEIDGKQEGTAK NLDEAFETIIRQWNLSE >gi|237663596|gb|GG668922.1| GENE 283 277765 - 277944 248 59 aa, chain + ## HITS:1 COG:no KEGG:EF1325 NR:ns ## KEGG: EF1325 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 59 1 59 59 93 100.0 2e-18 MNFKEKITEMVENVYDLARDGKYDVKVDLIPRKKGNIKSGVKVTSSRNTAHNIKWRSKN >gi|237663596|gb|GG668922.1| GENE 284 278000 - 278608 572 202 aa, chain - ## HITS:1 COG:L108801 KEGG:ns NR:ns ## COG: L108801 COG1309 # Protein_GI_number: 15674221 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Lactococcus lactis # 1 202 1 202 204 198 48.0 6e-51 MAKKTDLRVQRTRKMIIEAFFKLVETKGYEAVTIQDIADEAMINRATFYAHFKDKQHLYD AIFTFTLSAFTAILDSQQLVNGNRVRVKHIEELLTQLYINIQENKSFFLTIMDNNFNEHF RKRLAEIIEEKYATIFSQLRITENDIDVPIDFVIEYMTSIFIGTLHWWITSETDMTPNHL AQLVIKLVGNGHLTVLGIELEK >gi|237663596|gb|GG668922.1| GENE 285 278787 - 283034 3515 1415 aa, chain + ## HITS:1 COG:L104115_1 KEGG:ns NR:ns ## COG: L104115_1 COG1924 # Protein_GI_number: 15674220 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Lactococcus lactis # 2 633 4 634 634 909 70.0 0 MVMRAGIDVGSTTVKLVFLNKQNQSIFTKYERHFSDVKAATERILKEGLARIGADQPVTM SITGSGGMGLAEVLGIPFVQEVIACTRTVETIIPETDVAIELGGEDAKITFFDGALEQRM NGSCAGGTGAFIDQMAVLLKTDANGVNELAKNYQTIYPIASRCGVFAKTDVQPLINEGAA KEDIAASIFQAVVNQTIAGLAAGRKIKGKVAFLGGPLFFMSELRKRFVETLAIQTEDVIF PEQPQLFVAMGAALYSEDAAECTLEELIQRLVNSQATDLQPSDTLPPLFNSAEDLADFRE RHAQAQATEKPLSQHTGVTFLGIDAGSTTTKVTLIDEDGHLLFSFYGNNQGQPLETTMTV LKSLYQQLPEEVFIGKAAVTGYGEQLIKNALKVDIGEVETMAHYKAANHFQPGVDFILDI GGQDMKAMTIKNGVLSSIQLNEACSSGCGSFIETFAQSLKYNVKDFALAALESQAPVDLG SRCTVFMNSKVKQVQKEGASVGDISAGLSYSVIKNAIYKVIKVRRPEELGEKIVCQGGTF YNEAVLRAFEKISGREVVRPSIAGLMGAYGAALIALDAYEIGEETTLLSLEELAAFTSEK EFTHCGLCENNCQLTVTVFSDGRQFITGNRCERGARIKIKREERKVNLVDYKYRKLFKYR PLRENKAFRGRLGIPRVLNMYENYPLWHTFFTDLGFRVELSPRSNKQIYEQGLETIPSDT VCYPAKMAHGHIQALIDAQVPIIFYPGVVFEQQETVEADNHFNCPIVQSYPDVIRNNVDA IREGQVDYRNPYLNLANEAAVAKVLAENFADLGISLEEIQTALHHGYQELAAFKKEIQEK GEETLAMLTEKGQRGIVLSGRPYHLDPEINHGIAEVITQEGFHVLTEDSISHLGDVQNLR VVNQWVYHSRLYAAAKVVAKTKNLELVQLNSFGCGLDAVTTDQVEEIMDRSGKIYTVLKI DEGANLGAIRIRLRSLKAAVNEREKQQFVPHMQMEEPEKIVFTKQMKKTHTLLLPMLSPI HQSGLVDVALQASGYHVVCLPAQDKEAVNVGLKYVNNDACYPAIISIGQLVEALESGQYD LDNVSVLMTQTGGGCRATNYIPLLRKALNDAGFSQVPVVSVSMGNKGVESNPGFKFTLPM IKRLVVAFLYGDLFERVVYRTRPYETEKGMVDQLHQDWLKRVEANVRNGSLTQFNHFMKK IIRTFDEIPLQEIKKPKVGVVGEILVKYSPTANNDIVRLLEEEGAEAVVPDIVGFMNYSL YNQIWKYENMGMSKQSKRLAEFAIKIIELVEKPMDKALRKSVRFDGIHSIYDMAADASKI LSIGNHTGEGWFLTAEMIELLKHEVNNIVCMQPFGCLPNHIVGKGVVKELRRQYPQANIA AVDYDPGVSLVNQLNRIRLMMATANKLLKEENVKR >gi|237663596|gb|GG668922.1| GENE 286 283241 - 283948 875 235 aa, chain + ## HITS:1 COG:L0151 KEGG:ns NR:ns ## COG: L0151 COG2188 # Protein_GI_number: 15673419 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 3 235 4 235 235 264 56.0 1e-70 MVQNIPIYIQIHDKIKEDIEKGVWSIGDRLPSERELALKFDVSRMTLRQAIQTLADEGIL ERKIGSGTYVARKKVQETMTGTTSFTEITLSQNRVPSSRTVSYFVAKPSSSEMEKLQLGP EDSILRMERIRFADDIPICFEVASIPYSLVSQYGKSEITNSFYKTLEAKSGHKIGHSNQT ISAVQASEQIAEYLEIKRGDAILRVRQVSYFENGLPFEYVRTQYAGSRFEFYLEK >gi|237663596|gb|GG668922.1| GENE 287 284052 - 284120 119 22 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLSGRIQIKISESISIQINIE >gi|237663596|gb|GG668922.1| GENE 288 284477 - 284542 117 21 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKINVRKADTVDATAWWIII >gi|237663596|gb|GG668922.1| GENE 289 284611 - 285744 688 377 aa, chain + ## HITS:1 COG:BH1419 KEGG:ns NR:ns ## COG: BH1419 COG0476 # Protein_GI_number: 15613982 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Bacillus halodurans # 118 271 21 173 340 104 37.0 3e-22 MKYKYPRIKPIYPLYQLNKERFRVGAQLGITIEFDDDEGQFWTLSNLLDGVRSFDEVVTE MKRKYPELTVKDIEEGIDFLNDEGLIEETFPGRMIEDRYLANVNYFSRYCKADDDRFEIQ EKINNLKILLLGLGGGGSNILTLLAGLGPKMIRMVDYDRVEASNLGRQLLYREADIGEKK TVVAKRAINEMNSNINVETVDKKIIDVNDVVELTEGIDIIVCAIDEPPFLIHRIVNEAIV KVGLPCVFGASQVSRGRVYTVIPQKTGCFDCMNLNFSKNDPKFVEQFVGFRNIQFAPPSI AYGPGIFQLTASIVDELIRVVTRYAEPKSLGTQYEINYEDGNSFTHKTWPRFESECPTCG KGDVSQWEIFQYYQEKK >gi|237663596|gb|GG668922.1| GENE 290 285708 - 286508 224 266 aa, chain + ## HITS:1 COG:no KEGG:EF1330 NR:ns ## KEGG: EF1330 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 266 1 266 266 429 100.0 1e-119 MGNISILSREEIGRDYTEARTLKRKLNNGDWVYVSEVLNELVENKIMIKKADQRDDYKPL FVEPKNILFKSSSFLIDVNGIVAFTISIFLFVIKGSPFGSAVNVLFTNPLKFLLIAILVS IVSTTFHEFMHIIFSRNSRKINLNIVKAVATIPMTHVWTWSRFGRITAITSGMSSDAIFL LVFLIMNNKSVGVNSIAASILITRILWQFIIIQKTDINILISFVVDNPFYFEEVAIMKLI IIKVISISVLVMIIWLWFQPVINQFN >gi|237663596|gb|GG668922.1| GENE 291 286531 - 287475 265 314 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 275 1 261 311 106 27 2e-21 MNQQLELHSLSKKYKKSESYANDNINLRFNKGEITAIAGHNGAGKTTMLNQIIGITKSTK GSITFNGLSFARDSKIAREYVSMMPQLHAPLAGITMAQSVESIIRIRGGSQKIAEEECIK ILKELKIDGWKDIPGQKLSGGLRRLTSFAMAVVYPSPIIVLDEPTNDVDPIRRQKIWRYL KKLSNKGHIIIVVTHNILEVEKYADRYILMNHGKVLEDKNLKKQSIKINDRNYMTVNFLN LSDLKSVIVPSAIQTNINDEELMIEMELENSQVLEAVDWVMKLVIERKVQNYKVSPKSLN ETYGELIDENDKKL >gi|237663596|gb|GG668922.1| GENE 292 287453 - 288211 176 252 aa, chain + ## HITS:1 COG:no KEGG:EF1332 NR:ns ## KEGG: EF1332 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 56 252 1 197 197 326 99.0 5e-88 MKMIKNYRRKSMIKELFALVGWSLLRHKYLLPVFTLTQVFLSLAIVYGLALLIPDVNNQT AIYLSSGATTLGIIAVGCVLAAQIVSTAKQEGIVDYQRTLPVSRLNILISDFIIWGMASL PGVFMSFLAAYLRFDVQIRFSMKALAILSLIQLCMISIGFALAYWLTPNVVGLATQIIMI GGLLFSPITYPTDRLPSALVNFFEFLPFVPSSNLIRSLFYEQNTVNVSNIIVVCFWFVLT TLLSLISLSRRD >gi|237663596|gb|GG668922.1| GENE 293 288220 - 288933 213 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 4 217 12 230 312 86 28 2e-15 MQTININNLYKKVSDTFNLKVDQLDLEVGKIYGLVGPNGAGKTTLMKCLCSLLRPDSGIL KIDNRQVEIADPKILLQVGTNFVNSDSLNGFMLEDIYNDHAFYYKLKNLLMIETLLMDVG LNVNKKRKFNTMSLGMKQRFLLGLATAHNPSLVLLDEPFNGLDPDGVELFIENVKTLSEN RVLIISSHILRDMETFLDDVIFIEKGNVQEPKSMVEIREEYREGLKEYYDEQKRKHD >gi|237663596|gb|GG668922.1| GENE 294 289661 - 290275 126 204 aa, chain - ## HITS:1 COG:no KEGG:EF1335 NR:ns ## KEGG: EF1335 # Name: not_defined # Def: sensor histidine kinase, putative # Organism: E.faecalis # Pathway: not_defined # 1 204 233 436 436 366 99.0 1e-100 MEYRILNEIKRNRTNVLKLKHDLKNQYLTILGLIENEEVNEAIDYIKSSFDILEPPTKTY AADGVLNYLLNEKLAEARKNQINVDHQIFVSKNIKINNDVLTIVIGNIIDNAIQASKRIK PIDRYVNIIIKQVNNDLFIEVSNNYNSEEIFTRKHRKNKGLGMKNIDDLLQQLGGIQRHW TKERRYFVTIVIFNVYKGNKCGDN >gi|237663596|gb|GG668922.1| GENE 295 290438 - 290608 187 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315166691|gb|EFU10708.1| ## NR: gi|315166691|gb|EFU10708.1| hypothetical protein HMPREF9517_02719 [Enterococcus faecalis TX1341] # 6 55 1 50 87 75 98.0 8e-13 MIIDSMGIGNKITINDKFVDNSDFASLTIENLSMTIQATPIKVVIVIEVMKKVGLP >gi|237663596|gb|GG668922.1| GENE 296 291099 - 291803 389 234 aa, chain - ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 1 208 2 211 234 108 30.0 6e-24 MKVAICDDNPTLTEKINTMLFNYNPNIFETYTYYNPLKLVNQLDQENFDFFILDIEMSEM SGIDLAKKIRERDILSPIVFLTSYKEYMEEVFQVQTFDYLLKPPTEDRLHQVLEKLRQQL EKKRNYFVFSSNKVTYKIPTKDIIYFEKDKRQVLIHTVGEIYKPYMSTNQINEQLDTNFV QVHSSFIINCAYIKELGKNFLLMDSKEKCIEIPISRRFKAAAHKSIVMSMRGKI >gi|237663596|gb|GG668922.1| GENE 297 292380 - 292811 273 143 aa, chain + ## HITS:1 COG:no KEGG:EF1337 NR:ns ## KEGG: EF1337 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 143 1 143 143 270 100.0 2e-71 MLQKYIEILTRDEVIFRKKPDGTEVNYFLFPEFEIHINSLPGKTVQGWHKHHEIEEVLLV QSGKVKIEELENQQIISRICAEGELIRMHKSLHRISNPDTLSASFTVFRFVPQGQNQQEC IKNDKEEFSDAAVQRLLKINDSL >gi|237663596|gb|GG668922.1| GENE 298 292980 - 293894 630 304 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 303 1 306 306 247 43 8e-64 MYDVIIIGAGPAGMTAALYASRSNLSVLMIERGAPGGQMNNTAEVENYPGFDSIMGPELA YKMYENVEKFGTENAYGIVMGIEDHGSYKEVICDDKSYEAKAVIIATGCEHRKLGVKGEE EFAGRGVSYCAVCDGAFFKNKRLVVVGGGDSAVEEAIYLTQFASEVVIVHRRDELRAQKI IQDRAFANEKISFVWDTVVEEIVGNEMVVTGVKARNVKTDEVSEIEANGVFIYVGLDPLT EPFKKAGITNEAGWIETDQEMRTKIPGVYAIGDVREKTLRQITTAVGEGGIAGQQVFNYI EELK >gi|237663596|gb|GG668922.1| GENE 299 294179 - 294631 587 150 aa, chain - ## HITS:1 COG:no KEGG:EF1339 NR:ns ## KEGG: EF1339 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 150 1 150 153 285 100.0 4e-76 MVYTVDFKEVATIGLESSPVAPALAGLRANEARYFWNKYKHRFTTVPASEAPETLAWIEK ILLERELHFPYKPLEISSFTLDGIKMAYVFYENGLAVNVMYTLAEEGKRAVGFKLSDGMA IPAEFEGKFKFARQKSKLAGTIRGSYFVIK >gi|237663596|gb|GG668922.1| GENE 300 294828 - 295328 619 166 aa, chain - ## HITS:1 COG:no KEGG:EF1340 NR:ns ## KEGG: EF1340 # Name: not_defined # Def: pheromone cAM373 precursor lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 166 1 166 166 291 100.0 8e-78 MLKKPFLLFFSLLGAIFILASCGIGKDAVTDTKYKVSLQQAAEIYEKEAGNSKPLVNVQF DTEPASDYSYIFTNDTETLYVNPETGKVTKNTEANQLGENETAFSAAEVKELGAVNDVLA KAKKEVGGLSPRILTWKLTKNNNKLVYTVDVKTTTADEKVTLDANK >gi|237663596|gb|GG668922.1| GENE 301 295327 - 295419 95 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLPRFFLLSIHNHLVYGGFIKITNKKIIL >gi|237663596|gb|GG668922.1| GENE 302 295447 - 297786 2503 779 aa, chain - ## HITS:1 COG:L119891_1 KEGG:ns NR:ns ## COG: L119891_1 COG1136 # Protein_GI_number: 15672696 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Lactococcus lactis # 1 287 3 289 290 232 42.0 2e-60 MLELKEIKKYYTVGGTTTKALDGVSVAFRKQEFVAILGPSGSGKTTMLNVIGGLDNYDSG DLIINGKSTKNFKEADWDAYRNNSIGFIFQSYNLISHQGILDNVELGMTLSGISKAERRQ KAEDALIRVGLKDHIHKKPSQLSGGQMQRVAIARALANDPDILLCDEPTGALDSETSLQI MALIQELSKEKLVIMVTHNPELAHEYADRIIEFSDGQIRHDSRPHIEHEKKEPFELKRTK MKFTTALRLSFNNIRTKKGRTFLTAFASSIGIISIAIVLSLSTGFQKQIDKTQSETLAQF PITISKIATDQDPESFNNQDKKGTFPKEKEVTAKISDADRAQHTNLIDQKFIDYVNHIDP ELSNNIGYTRLVNMNLLREINGKAQAVKFSNDAPDGQSNAMASMMAAQTGVGVSAFPKQL ENGKNNFLKDNYSLLEGNYPEKETDVVLIVDSNNTTNINALKNLGFDVKDNQKIAFSDIV GTKMKLANNNAFYTKLPTGNFIPNQDLQAVYDNPENTELTISGILRIKDSSTMNLLAPGI AYSDALSTNMIAKNKTSDIVKAQEASNTNVMTNETLDASAKENLLSYLGANEIPSSIMIY PNDFKSKDKILDYLDAYNKGKDKKDQIIYSDLAGTMTRLTGGLMDAITYVLIAFAGISLV TSMIMIGIITYTSVIERTKEIGILKALGARKKDITRVFDAETAILGVASGILGVVIAFLA TFPINAVLYNLTDLENVATLNPIHGIILIVISTILTMIGGHIPARMAAKKDAAVALRAE >gi|237663596|gb|GG668922.1| GENE 303 297932 - 298420 485 162 aa, chain + ## HITS:1 COG:no KEGG:EF1342 NR:ns ## KEGG: EF1342 # Name: not_defined # Def: MarR family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 162 1 162 162 252 100.0 3e-66 MDKEKHSSNLDISVFTEIFSYMSQLLFKDLDLEDLKLTKLDMLILLIVATNEGISMTELA NQVGTSKVQVSRSIAGLEERAIVQRRHNQENRRVVNVYTTKEGEKLFKQKENQVKQQLSE TLSVLSLEDYQEVNQHFLAVMKILSNYQALRRKTCKENNAKK >gi|237663596|gb|GG668922.1| GENE 304 298458 - 299321 715 287 aa, chain - ## HITS:1 COG:SPy1296 KEGG:ns NR:ns ## COG: SPy1296 COG3833 # Protein_GI_number: 15675249 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Streptococcus pyogenes M1 GAS # 8 286 2 278 278 327 67.0 1e-89 MAKAKSYQKKQRTALTSVYIILTILAVFWMFPIVWIILTSFRGEGGAFVPYIIPKTFTLE NYKVLLTNQTGNFPFVRWFLNTLFVSIASCLLSTFITIAMAYALSRLRFRLRKPFLKVAL VLNMFPGFMSMIAVYYILKALNLTESLFALILVYSAGSALGFYIAKGFFDTIPMALDESA MIDGANKWQIFTKITLPLSKPIIVYTSLTAFMGPWMDFIFAKVIMGDKVENYTVAIGLFS MMTKSTANSLFMAFTAGCVLIAIPITILFILMQRFYVEGVTSGSVKG >gi|237663596|gb|GG668922.1| GENE 305 299325 - 300668 977 447 aa, chain - ## HITS:1 COG:SPy1295 KEGG:ns NR:ns ## COG: SPy1295 COG1175 # Protein_GI_number: 15675248 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Streptococcus pyogenes M1 GAS # 10 447 11 450 453 541 67.0 1e-154 MFKKKKAQTSFREVFKKGDFATKLSFLVMGAANFANKQWLKGIIFLTAEIGFIYWLIRNG FHALMMLGTLGTQQQGLVYDDSLGIEVLKEGDNSMLLLLFGIAAILVCLSLIILYVINLK SARHLYELKTAGKKIPTTMDDLRSLLNERFHATLMTIPLLGVLFFTILPLLYMISIAFTN YDHNHLPPKNLFTWVGLANLGNVITGDMASTFFPVLGWTLIWAVFATATCFFFGIILALL INTKGLKYKAFWRTIFVITMAVPPFVSLLIMRNLLNGSGPINALLLNWGLIDSSIPFLTD PNWAKLTIIVVNMWIGIPATMLISTGIIQNLPEDQIEAARIDGANKWQIFKSITFPQILF VMTPALIQQFIGNINNFNVIYLLTGGGPANSNFYGAGSTDLLVTWLYKLTVDTMDYNLAS VIGILIFILSAVFSLIAYTRTNSFKEA >gi|237663596|gb|GG668922.1| GENE 306 300754 - 302004 1640 416 aa, chain - ## HITS:1 COG:L128695 KEGG:ns NR:ns ## COG: L128695 COG2182 # Protein_GI_number: 15673665 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Lactococcus lactis # 4 415 3 410 410 280 41.0 3e-75 MKANWKKILMGGILLSASAVLLTACGGAEKTKAENESGSANKAAGDVKLWVDTEYMGVFK KVVADFEKENPDIKVNLTAGNSADAKKDIAKDPKAAADVFMMPHDQIGQMAEAGLIYPNT KYEKEVKENNIDSAVAGVTWKDKVYAYPYAVESQVLYYNKDTYSPEEIKTWKSLTEKGKI GTNFGEDGANYIFGPLFMSNGDYLYGENGEDPKGTNFNNQQGIEVLQWIADQKNNPGVIQ SNTEALSNLGSGKTDAFLSGPWSKNDVEKALGDKMGAAAYPTIDFGNGEKQMKAFLGVRS FAVNQQTQAPLAAMTLANYLTSEKAQMTYFKEIGFVPSNKKLQTNEEITQDTVAKAILEM AQPTHSVVMPKIPEIVSFWPAMDAVINDTYKGNIKPADYQAKLDKLVQDTSKEAKE >gi|237663596|gb|GG668922.1| GENE 307 302189 - 302263 85 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQSFALKCVRVLENTRKATIKGEN >gi|237663596|gb|GG668922.1| GENE 308 302264 - 304030 1561 588 aa, chain + ## HITS:1 COG:L128694 KEGG:ns NR:ns ## COG: L128694 COG0366 # Protein_GI_number: 15673664 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Lactococcus lactis # 1 587 1 584 584 710 57.0 0 MNTAAIYHRPESEFAYLYTEETMHIRLRTAKGDIASVQLVQGDPYLLGKEKWYQQSLTME KLVSTELYDYWFIALSAKFKRLSYAFTLVGADGLRAFYGEHGIYPLEEKYLEMANNYFRM PYFHEIDRFKAPEWVKETVWYQIFPERFANGDLANDPEGTLPWGSKRPDRQDFFGGDLQG VLDHLDYIEDLGVNGLYFCPIFEAFSNHKYDTIDYLKIDPAFGDGATFKRLVEECHRRGI KIMLDAVFNHMGDTSPQWQDVLKNGQDSIYADWFHVNEFPASYEESADFEEASNITYDTF AFTPHMPKLNTANPEVQAYLLEIARYWIEEYDIDAWRLDVANEVDHAFWKKFRQTCDDAK EDFYILGEIWHSSQSWLQGDEFHAVMNYAYTDAIMGYFVKQELSLEKMLSEMNNQLMLYR QQTNQMQFNVLDSHDTPRLLHETKEDKELMRQVLAFTYIQPGVPCLYYGDEIGMTGDMDP DCRRCMVWEENQQDLDLKEFVKSLIALRKKYAAVFSGGTIDWTGTSFETGLIRLACRLEE QTIYGIFNTGQETQFVDRTDREVLLSSSIEIASEQIMVLPKGFLLYQA >gi|237663596|gb|GG668922.1| GENE 309 304058 - 305683 1598 541 aa, chain + ## HITS:1 COG:SP0342 KEGG:ns NR:ns ## COG: SP0342 COG0366 # Protein_GI_number: 15900272 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Streptococcus pneumoniae TIGR4 # 1 539 1 534 535 686 62.0 0 MEKHWWQEVVVYQIYPRSFKDSNGDGIGDLPGIIEKLDYLETLGIGAIWLSPVYQSPNDD NGYDISDYEAIMTEFGTMADMDRLIEEAKKRKIEIIMDLVVNHTSDEHRWFIEAKKSKEN PYRDYYVWADPASDGGAPNRLKSAFSGSAWTFDEASGQYYLHLFSKKQPDLNWGNQQMRQ SVYEMMNFWIDKGIGGFRLDVIDLVGKIPGEEITANGPHLHRYLQEMNAATFGGKELLTV GETWGATPEIAKMYSSPERHELSMIFQFEHMSLDQQPGKEKWDLQPMEVAKLKQVFAKWQ TELGNDGWNSLFWNNHDLPRMISRWGNDQEYWLESSKLFAILLHMMKGTPYIYQGEEIGM TNTPITDIREARDIETINMYHEYLEKGYSKEEILLKINTKGRDNARRPMQWTAEKNAGFT TGTPWIDVNPNYQTINVAAALADKNSLFYTYQEMIRLRKEHPLIVWGNFELLETVEEVIS FYRTYGEERWLVVTNFSDKVQPFSADVSVEQVMIENMPTDVTALADYSLAPWQAFVVKVS Q >gi|237663596|gb|GG668922.1| GENE 310 305685 - 307298 1436 537 aa, chain + ## HITS:1 COG:L128691 KEGG:ns NR:ns ## COG: L128691 COG0366 # Protein_GI_number: 15673660 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Lactococcus lactis # 9 537 13 544 545 615 57.0 1e-176 MDQWWKNAVGYQIYPRSFKDSNGDGIGDLQGIIEKLPYLKELGVDFLWLNPIYTSPNVDN GYDIADYQGIQPEFGTMEDFQELLDQAHQLGLKIILDLVVNHTSDQHPWFVEAKKSLDNP YREYYLWADATPDRMPNEWQSFFGGSTWTYDEGTKQAYFHVFAKEQPDLNWKNPKVREEI YAMIRWWLDLGIDGFRLDAISHIQKEPWDFKITTNPWAPFMNVKGIEDYMLDLKVIFAEY DIMTVGEASGVSSKKAVEWTNDAGYLNMIFELEHNVREGKPGEERLNILGYKKVMARWQK HLGTEGWNALYVENHDNPRINSILGNETSHSAKAIGTIALLLRGTPFIYQGQEIGMVNYP FQQIDELDAKDSHNHYRLLIESGYDAKQALKEVAHWTRDHSRTPMQWTSQEASSFTSGHP WLAIHPNFKEINVADQETDAQSVLNYYKKLIALRKDNPVFTDGQFELLAPNHPSVFAFLR KTTEATALVIVNLSGEKCQFDLPNKLLGRKWQQLLGNQDFTVKKRMQLAPYQAGVFQ >gi|237663596|gb|GG668922.1| GENE 311 307469 - 308050 649 193 aa, chain + ## HITS:1 COG:L85237 KEGG:ns NR:ns ## COG: L85237 COG3548 # Protein_GI_number: 15672844 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Lactococcus lactis # 1 187 1 184 188 129 38.0 3e-30 MPKTRVEAFTDAVIAIILTLLILELKIPEKADWSALTQSGHKIIIYLISFVTLLIYWNNH HHLFQSVRKIDGRVLWMNNFLILTLTFFPFVTGWVGEHPFSWPPQALYGLVVLGADVAYY LVVRALIQANGPKSEVQRLFGHYPKLTLSIVLNIIALIVGKMVAPIAVLIIDTIVLVMWF IPERKAEIKEILK >gi|237663596|gb|GG668922.1| GENE 312 308526 - 311135 2708 869 aa, chain + ## HITS:1 COG:lin2836 KEGG:ns NR:ns ## COG: lin2836 COG0474 # Protein_GI_number: 16801896 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Listeria innocua # 17 869 13 856 856 897 54.0 0 MNKKTMDMRKATKDQELRKLALLSERELMMELRTSEKGLSNEDAEKRLEEFGPNEVSAQK PTPAIILFLSAFKDPFVYVLALLMVVSTLTKDFEAAIVMGVMILASVLIAFIQEYRSQKA SLDLKELIENTAAVTREGITKEIPMDEIVPGDIVTLATGDMIPADAVLIWTKDLFVNQSS LTGESMPVEKFVDAGVDRQQTEVSALDMQDLVFMGTDVLSGQGKAIILKTGQHTFFGDIA KNATTQRGKTSFDLGLAKVSKFLLRMVMILFPIVFLINGLTKGAWGEAFFFAIAVAVGLT PEMLPMIVTSNLAKGALSLSKHKVIVKELAAIQNLGGMDVLCTDKTGTITEDRVVLVQHL NPLGDLSDEVLNLAYLNSSYQTGWKNLMDIAVINFYEEHQWKTPFKNVTKIDEIPFDFSR RRLTVVVNADDHQLMITKGAVEEMEEVCTHAQINGEIVPLSTAVREELRRVNVQMNKQGM RVLAVAVKKDVHKEAVYSVEDEKEMTLIGFMGFLDPAKESAVSAIRSLHEHGVNVKVLTG DNDIVAKKVCKDVGIEVSHVLLGSQIEAMTDEELRAQVEETNLFAKLNPMQKSKIIELLQ AKGHTVGFMGDGINDAPALRKADVGISVDTAADITKDASSIILLEKSLNVLESGVIEGRK VFSNMMKYIKITISSNFGNVFSILVASAFLPFLPMLSLQLLIQNLIYDVAQLTIPWDNVD EEELLSPVRWETNGLAKFTVCIGPVSSIFDILTYLVMWFVFSANSLATQHLFQTGWFMVG LVSQTLVVHMVRTRKIPFIQSRASMPVMLSSLGAILLGFLIVATPIREVFDFVKLPANYW PWFFGIIIAYMLTVEVAKRLYIKITKEWI >gi|237663596|gb|GG668922.1| GENE 313 311734 - 312849 1681 371 aa, chain + ## HITS:1 COG:lin1044 KEGG:ns NR:ns ## COG: lin1044 COG1071 # Protein_GI_number: 16800113 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit # Organism: Listeria innocua # 1 371 1 371 371 527 70.0 1e-149 MAKAKKQKPIDFKELMAKVDADFPTFQILDQDGKIVNEDLVPDLSDEELVELMTRMVWSR VLDQRSTALNRQGRLGFFAPTAGQEASQLASQFAMEKEDYLLPGYRDVPQLVQHGLPLRE AFLWSRGHVAGNYYAEDLNALPPQIIIGAQYIQAAGVALGLKKRGKENVVFTYTGDGGSS QGDFYEAINFAGAYQANGVFIIQNNGFAISTPREKQTAAKTLAQKAVAAGIPGIQVDGMD PLAVYAIAKEARDWSAAGNGPVLIETLTYRYGPHTLSGDDPTRYRSKEMDDEWVQKDPLT RFRKYLTDKGLWSEAKEEEIIEKTKEEIKVAIAEADKAPKQKVSDFLKNMFEVQPQTIKE QIAFYEAKESK >gi|237663596|gb|GG668922.1| GENE 314 312852 - 313829 1314 325 aa, chain + ## HITS:1 COG:lin1045 KEGG:ns NR:ns ## COG: lin1045 COG0022 # Protein_GI_number: 16800114 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Listeria innocua # 1 325 1 325 325 498 76.0 1e-141 MAQKTMIQAITDALALELEKDENVLIFGEDVGNNGGVFRATEGLQEKFGEDRVFDTPLAE SGIGGLAFGLALQGYRPVPEIQFFGFVFEVFDEIVGQMARTRYRMGGTRNMPITVRAPFG GGVHTPELHSDNLEGLIAQSPGVRVVIPSNPYDAKGLLISSIRSNDPVVYLEHMKLYRSF REEVPDEAYEVPLDKAAVTREGTDVSIITYGAMVREAIKAADSLAKDNISAEIIDLRTVA PLDVETIINSVEKTGRVVVVQEAQKQAGVGAMVVSEISERAVLSLEAPIGRVSAPDTIFP FGQAENIWLPNAKDIEAKAREIVEF >gi|237663596|gb|GG668922.1| GENE 315 313972 - 315591 1987 539 aa, chain + ## HITS:1 COG:lin1046 KEGG:ns NR:ns ## COG: lin1046 COG0508 # Protein_GI_number: 16800115 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Listeria innocua # 1 538 1 543 544 580 63.0 1e-165 MAYQFKLPDIGEGIAEGEIVKWFVKPGDTINEDDTLLEVQNDKSVEEIPSPVTGTVKNIV VPEGTVANVGDVLIEIDAPGHEDNDAAPAAPAQEQTPAQPAAVPTTEAAGGFFQFKLPDI GEGIAEGEIVKWFVKAGDTINEDDSLLEVQNDKSVEEIPSPVTGTVKNIVVPEGTVANVG DVLVEIDAPGHNSAAPSVAAPATDAPKAEASAPAASTGVVAAADPNKRVLAMPSVRQYAR EKDVDITQVTATGKGGRVIKADIDAFVSGGSQAAPATEAAATEAAPKAEAAAPKAAPKAF TSDLGEMETREKMTPTRKAIAKAMVNSKHTAPHVTLHDEVEVSKLWDHRKKFKDVAAANG TKLTFLPYVVKALTSTVQKFPILNASIDDAAQEIVYKNYFNIGIATDTDHGLYVPNVKNA NTKSMFAIADEINEKAALAIEGKLTAQDMRDGTITISNIGSVGGGWFTPVINYPEVAILG VGTIAQEPVVNADGEIVVGRMMKLSLSFDHRIVDGATAQKAMNNIKRLLADPELLLMEG >gi|237663596|gb|GG668922.1| GENE 316 315599 - 317005 786 468 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 11 468 5 458 458 307 36 7e-82 MVVGDFAIELDTVVIGAGPGGYVAAIRAAEMGQKVAIIEREYIGGVCLNVGCIPSKALIA AGHHYQEAQDSSTFGVTAKGVELDFAKTQDWKDNTVVKSLTGGVGMLLKKHKVEIIEGEA FFVDENTLRVIHPDSAQTYSFNNAIVATGSRPIEIPGFKFGGRVLDSTGGLNLKEVPKKF VIIGGGVIGAELGGAYANLGSEVTILEGSPSILPTYEKDMVKVVTDHFKKKNVTIVTSAM AKEAVDNGDSVTVKYEVNGKEESVEADYVMVTVGRRPNTDDLGLEQAGVEIGERGLIPVD NQGRTNVKNIFAIGDIVPGAALAHKASYEAKIAAEAISGKKVAVDYKAMPAVAFTDPELA SVGMTVAEAKEAGIEAKGYKFPFAGNGRAISLDKTEGFMRLVTTVEDNVIIGAQIAGVGA SDMISELALAIESGMNAEDIALTIHPHPSLGEITMDTAELALGLPIHI >gi|237663596|gb|GG668922.1| GENE 317 318660 - 319646 795 328 aa, chain - ## HITS:1 COG:lin1114_1 KEGG:ns NR:ns ## COG: lin1114_1 COG4936 # Protein_GI_number: 16800183 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Predicted sensor domain # Organism: Listeria innocua # 15 117 13 115 149 107 42.0 4e-23 MTVELKNILDLEKWEKLQESLALSTRLAIILVDYKGRPVTKHSQVQPFCQLVRHSPELSK LCEKCDARGGLEAVRTGQPFIYRCHFNIVDMAIPIIVDDQYVGAIMAGEVLLEDHQEELE QVLTMNDAFIQEFLVTHQELYQQYPVLELADLEKSATLIADLSQYIISEAIKKDYLINTY KQSLQISSRKEELEPLNMIQKDIQQTLLTAQLTPSSAYQTKNKQLQPVLDALWENKSLRL NLQELADLVHLTPTYLSRLLKEEFGIPFSQFYRQLKITWAKQLLLETDKTIAQISEDLGF VEDSYFVRIFKQETGETPLKYRKRKNRA >gi|237663596|gb|GG668922.1| GENE 318 319807 - 320946 1390 379 aa, chain + ## HITS:1 COG:gldA KEGG:ns NR:ns ## COG: gldA COG0371 # Protein_GI_number: 16131783 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Escherichia coli K12 # 1 372 14 375 380 283 42.0 5e-76 MRKALILPTKYVQGEDELLNLGYFVSTFGKKALLIANPADVDRVRPQLEETAKKFDITFV EGGFSGEVTREETKRLQNVGQKEQADCIIGLGGGKAIDASKVVAEGENLIIVPTIAAQDA PTSHSAVLYHEDGSFDDYAYFKQSPSVVMVDTKVVAKAPTRFLVAGMGDALSTYFEARAT HNSYSRVNASLPMGSREGLTPAASGTYAALAMAKLCWENLQEDGLKAKLACDANVVTESL NKIIETNILLSGLGFESGGLAAAHAIHNGMTVLPGAHSYLHGEKVAFATIAQLVLEDAAK DELEAVLDFSASVGLPLTLSDIGVDEITYEEALEVAKIACIPEESIHSMPFPIVVEEVAN AIIVADKVGQEYKTRHKLD >gi|237663596|gb|GG668922.1| GENE 319 320959 - 321204 192 81 aa, chain + ## HITS:1 COG:no KEGG:EF1359 NR:ns ## KEGG: EF1359 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 67 1 67 132 125 97.0 6e-28 MKADILLVSHSKMITDGIKEMIEQMNASEEITIHSLGGTSDGSLGSDPMKIIDTINEADS DREFFNFCRFRQCRFKFRISF >gi|237663596|gb|GG668922.1| GENE 320 321113 - 321358 248 81 aa, chain + ## HITS:1 COG:no KEGG:EF1359 NR:ns ## KEGG: EF1359 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 13 81 64 132 132 128 100.0 6e-29 MTRLTKRTLTENFLIFADLGSAVLSSELAFDMLEEDQQKHYHLVDAPLVEGAFASAITAG VSDDLTQILAEAQNAGKKGWN >gi|237663596|gb|GG668922.1| GENE 321 321359 - 322342 1435 327 aa, chain + ## HITS:1 COG:L45677 KEGG:ns NR:ns ## COG: L45677 COG2376 # Protein_GI_number: 15672230 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Lactococcus lactis # 15 327 1 315 316 382 62.0 1e-106 MKKIINEPGKIVEEMLQGIVKSYGNLVHQVEDSRVIARNDSNKQVGLVSGGGSGHEPAHA GFVGDGMLNAAVLGDVFTSPTPDQILTGIQAADQGAGVLLIVKNYTGDILNFEMAKDMAD MEDIHVEMVVVDDDIAVEDSTYTAGKRGVAGTVLVHKILGHHARQGASLEELVSLGEKIV SATKTIGVALKAATVPEVGKPGFTLPEDEIEFGVGIHGEPGYRREKIQPSKELAKELVEK TLSSYEQQPQTVGVLVNGMGGTPLMEQFVFMNDVLTLLEDKGVQVTFHKVGNYMTSIDMQ GLSLTMIDLATKDWQTALESNVTTISW >gi|237663596|gb|GG668922.1| GENE 322 322355 - 322957 851 200 aa, chain + ## HITS:1 COG:lin2844 KEGG:ns NR:ns ## COG: lin2844 COG2376 # Protein_GI_number: 16801904 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Listeria innocua # 11 196 11 194 198 194 53.0 9e-50 MELTVKDIQTWLDNYSKVIEEKKDYLSELDTPIGDGDHGNNMARGMAEYKIAFDKKVPTT ITETFKVLSMALISKVGGASGPLYGTAFMNMTKATKDLETISSPEQLKEIVQQGLAGIQM RGKAEPGDKTMVDVWAPVAEVIGTEQFNEEKIEQFAEATKDWVAKKGRASYLGERAIGHI DPGAASSALLFEELVKVINQ >gi|237663596|gb|GG668922.1| GENE 323 323096 - 323863 757 255 aa, chain + ## HITS:1 COG:no KEGG:EF1362 NR:ns ## KEGG: EF1362 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 255 1 255 255 438 100.0 1e-121 MKKHVIVGCLLIVSSMFVSACGNSSDVTTEKTSVTKQVEATGQSTSSSVDQTKYDAIITE AKKLTAEGQYKESEEKLATIPVSDLGKPHYSIVKETVEKLNNQNSEGLKRQEEVAVEKQT KSSPAPTGSLKPIPDEFAKWATTYLFYYPRGDQKQAGLIIEANGAVTQTNTNGEIYTGKA EISGASGTILSYDTTSYRPTTQPATKSITPNVKITVTWNNGGGVDVYYGYVSYSQRLALT DGIAVTDGVKEVWLS >gi|237663596|gb|GG668922.1| GENE 324 323936 - 325087 1430 383 aa, chain - ## HITS:1 COG:L13187 KEGG:ns NR:ns ## COG: L13187 COG3425 # Protein_GI_number: 15673554 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxy-3-methylglutaryl CoA synthase # Organism: Lactococcus lactis # 1 382 1 382 384 497 65.0 1e-140 MTIGIDKISFFVPPYYIDMTALAEARNVDPGKFHIGIGQDQMAVNPISQDIVTFAANAAE AILTKEDKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEACYGATAGLQL AKNHVALHPDKKVLVVAADIAKYGLNSGGEPTQGAGAVAMLVASEPRILALKEDNVMLTQ DIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMG KKALLAKISDQTEAEQERILARYEESIVYSRRVGNLYTGSLYLGLISLLENATTLTAGNQ IGLFSYGSGAVAEFFTGELVAGYQNHLQKETHLALLDNRTELSIAEYEAMFAETLDTDID QTLEDELKYSISAINNTVRSYRN >gi|237663596|gb|GG668922.1| GENE 325 325273 - 327684 2665 803 aa, chain + ## HITS:1 COG:L10433 KEGG:ns NR:ns ## COG: L10433 COG1257 # Protein_GI_number: 15673552 # Func_class: I Lipid transport and metabolism # Function: Hydroxymethylglutaryl-CoA reductase # Organism: Lactococcus lactis # 393 801 4 409 410 491 62.0 1e-138 MKTVVIIDALRTPIGKYKGSLSQVSAVDLGTHVTTQLLKRHSTISEEIDQVIFGNVLQAG NGQNPARQIAINSGLSHEIPAMTVNEVCGSGMKAVILAKQLIQLGEAEVLIAGGIENMSQ APKLQRFNYETESYDAPFSSMMYDGLTDAFSGQAMGLTAENVAEKYHVTREEQDQFSVHS QLKAAQAQAEGIFADEIAPLEVSGTLVEKDEGIRPNSSVEKLGTLKTVFKEDGTVTAGNA STINDGASALIIASQEYAEAHGLPYLAIIRDSVEVGIDPAYMGISPIKAIQKLLARNQLT TEEIDLYEINEAFAATSIVVQRELALPEEKVNIYGGGISLGHAIGATGARLLTSLSYQLN QKEKKYGVASLCIGGGLGLAMLLERPQQKKNSRFYQMSPEERLASLLNEGQISADTKKEF ENTALSSQIANHMIENQISETEVPMGVGLHLTVDETDYLVPMATEEPSVIAALSNGAKIA QGFKTVNQQRLMRGQIVFYDVADPESLIDKLQVREAEVFQQAELSYPSIVKRGGGLRDLQ YRTFDESFVSVDFLVDVKDAMGANIVNAMLEGVAELFREWFAEQKILFSILSNYATESVV TMKTAIPVSRLSKGSNGREIAEKIVLASRYASLDPYRAVTHNKGIMNGIEAVVLATGNDT RAVSASCHAFAVKEGRYQGLTSWTLDGEQLIGEISVPLALATVGGATKVLPKSQAAADLL AVTDAKELSRVVAAVGLAQNLAALRALVSEGIQKGHMALQARSLAMTVGATGKEVEAVAQ QLKRQKTMNQDRAMAILNDLRKQ >gi|237663596|gb|GG668922.1| GENE 326 327704 - 328756 873 350 aa, chain - ## HITS:1 COG:lin0948 KEGG:ns NR:ns ## COG: lin0948 COG0628 # Protein_GI_number: 16800017 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Listeria innocua # 1 332 1 330 348 277 50.0 3e-74 MSLYQKFIQNERLRRFCVLALIIFVLYLSRSMITTILLTFIFTYLAVRLVHFVQRYMKIP TIVIVLLTYALVVFLIYLAITKYVPVLVNQTTQMINSVVDFYQSPHTDTNQVLQFIDQYL EKSNLLSQLQNGASMILRYIQDIGAVGLSFVMSFILSFFFMIEKKQMADFSKLFLKSDFD WFFQDIYYFANKFVNTFGVVMEAQFFIAVVNTVITTLALAIIGFTQLPSLAIMIFILSLV PVAGVIISCIPLSFIAYSQGGLNDVIYILALITIVHLFESYVLNPKFMSSKTELPIFYTF VILLVSERLFGVWGLIVGIPVFTFFLDVLKVKPIRGLKRLPNVKKNSSAE >gi|237663596|gb|GG668922.1| GENE 327 328773 - 329978 988 401 aa, chain - ## HITS:1 COG:lin1003 KEGG:ns NR:ns ## COG: lin1003 COG1434 # Protein_GI_number: 16800072 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 66 401 10 344 344 208 40.0 1e-53 MQFYGDLTFLGVYLLGLFFIPSWRKKKKEHDWLPWMFGWTVFMFFSYVLYLEIIRGTAFF LIPIAFFGLFALFYFKEKRRLLNGTLFNIFLVVLATYLGITAIRTNNYFLITLAIIALLA IFIALALGLYALIIFLYWNAVVVMRKEGRSLGNLLTLLLAIGLTLLLIYNFFFQSLLPTW LSLPLTIAPFILTYFAFVFYNFLTVSTLYQFNQPKYTQDYIVVLGSGLINGEIVPPLLQA RINKAIQFYKAQNRATLNPPKIVMSGGQGPDELLPESVAMKMYALTQGIPDDDILVEAHS KNTLENMRFSKETMIEDFGNANFQAIFTTNNYHLFRAGLFARMAGLKADGIGAKTAFYFL PNAFIREFIAIVVMYKRRHIIVCGLAAIGMVMLFLTGLIIQ >gi|237663596|gb|GG668922.1| GENE 328 330134 - 330334 333 66 aa, chain - ## HITS:1 COG:lin1401 KEGG:ns NR:ns ## COG: lin1401 COG1278 # Protein_GI_number: 16800469 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Listeria innocua # 1 66 1 66 66 98 81.0 3e-21 METGTVKWFNSDKGFGFITAENGNDVFVHFSAIQGDGFKTLEEGQAVTFEIEEGQRGPQA TNVTKA >gi|237663596|gb|GG668922.1| GENE 329 330632 - 331753 1194 373 aa, chain - ## HITS:1 COG:no KEGG:EF1368 NR:ns ## KEGG: EF1368 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 373 1 373 373 709 100.0 0 MANQKKDSLSTLFSEEVHGPFVTFLFNTHVAHQNVEKDSLVLKNFAKAAKTRFEKKFPEE KWSVFQEKIDALLADASFWRNGTASVSIILSPENTFVQRLDVPVDDQYYVDTIPYLLGLV KDKQFNYHYYLLALNRDSMKLYKVDHTTVTPVELPKDAPTDVVTALGDELTGGNLNFSTQ GSSNGSKEGVAYHSINTKDKEVEIDWVNYYQAVDTFLKDQLDNPEKLPLYLYALPENQTL FKKIAKNPYYDCSISVAASPAQATIQDIRSASEKIAAELTEKETASYNKLLDRKFLDQFT DISPAAADGKISHLFIATSLFVTENNEMSSEEYDRRKLLNTIAYQVIQNGGQVFVLDQKA APDEKSLAAILRY >gi|237663596|gb|GG668922.1| GENE 330 332092 - 332442 381 116 aa, chain - ## HITS:1 COG:lin2607 KEGG:ns NR:ns ## COG: lin2607 COG1396 # Protein_GI_number: 16801669 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 1 100 1 97 107 68 38.0 3e-12 MTLISRIKQLAQSKQLTLAQLERNVGISNGQIRRWDTSSPKVENLLKIADYFSVSLDYLM GRTQQTEINHQAPMKSTQKELHIHITTEELTEEEITQLEEEANRFLRFRKFEMTNS >gi|237663596|gb|GG668922.1| GENE 331 332634 - 333056 434 140 aa, chain + ## HITS:1 COG:L184516 KEGG:ns NR:ns ## COG: L184516 COG0477 # Protein_GI_number: 15672362 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 21 140 8 129 467 129 59.0 2e-30 MEKIKSYQEDSEVQKNRWWILVSVAMFTFMSTLDSSIVNIALPTISKEMSVPMNQAEWVV SIYLMVVCACLLLFGKIGDSFGKIKVYRIGTVIFTIGSLLCGFNQSLSFLLFARVVQSIG ASMTMATNSGIITEVFPLTS >gi|237663596|gb|GG668922.1| GENE 332 333415 - 334305 714 296 aa, chain + ## HITS:1 COG:CAC3668 KEGG:ns NR:ns ## COG: CAC3668 COG0477 # Protein_GI_number: 15896900 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 1 291 177 467 486 193 37.0 3e-49 MGLVTILIGEKFLPKDITKTKEKIDFSGFACIAIAIMTFFGGIFLGQESGFGSLQSYLLF IIAVIALGLFIMVERKRKSPLIKFAIFKNKIFTLSLLSAVLIFASNFFVNVVIPFYLQDA RKLSASYAGLLMMVFPLLMVVGAPLSGYLTDKIGPGILTFGGLLLLCCTSLMYMFLDMNS PIWYYVIATAIMGLGNALFQSPNNTMVMSSVEKQDLGVAGSMNSFARNLGMVIGIALSTT ILYRGMSEAYGERVTTYLANRPDIFIVGMRETFFVAFLLCVAAFILTILRFRKTTK >gi|237663596|gb|GG668922.1| GENE 333 334510 - 335184 823 224 aa, chain + ## HITS:1 COG:BH3178 KEGG:ns NR:ns ## COG: BH3178 COG2220 # Protein_GI_number: 15615740 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Bacillus halodurans # 1 222 1 224 226 223 51.0 3e-58 MELIGHGHSCIEIRLNDGTNLLFDPFINGNPLADVSLADLHPDYILITHGHSDHIGDMLA IAQANKATIIAIAEVAMYAQSQGVKAHGMNLGGRYVFPFGSVKFVPALHSSGYEIDGVMT YMGEASGIILEAEDKKIYHAGDTALFSDMRLFAKDKSIDVAFLPIGDNYTMGPEDALEAI AYLNPEITIPIHYNTFPVIQQNPAIFVEQVVGGKVLNPGETILV >gi|237663596|gb|GG668922.1| GENE 334 335194 - 336513 1293 439 aa, chain + ## HITS:1 COG:lin1611 KEGG:ns NR:ns ## COG: lin1611 COG4109 # Protein_GI_number: 16800679 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing CBS domains # Organism: Listeria innocua # 1 438 1 437 437 489 57.0 1e-138 MATKHDQILKHIEDLPIGDRISVRSIAKSLSVSEGTAYRAIKDAENIGLVSTIQRVGTIR IERKLKKHIEKLTFGEVVRIIEGDVLGGSSGLDKVLNKFVIGAMTETAMTRYITPGSLMI VGNRQGVQKLALENGAAVLITGGFETSEEIAQLADRLGMPVLRTTYDTFTVATMINRALS DQLIKKDILLVSDIYTALEKTNYLLTTQTIADYQALSESTHHSRFPVVNKKLRLVGIVTA KDVIGKSEHLTVDKVMTKDPNVVKKMMSVASVSHQMIWDGLEVMPVVEDDLALVGIVSRQ DVMKAMQLVQRQPQIADTISDQISGEVMPVEENGKETTRFRFSVAPQMVNSVGTISFGVL SEIISNVTQRTMLMNQKRNVLIEQVNLHYLRLIQLESELDIRPRILEIGRRSAKLDIEVY LENVIVAKAIVVCQVMERT >gi|237663596|gb|GG668922.1| GENE 335 336527 - 337480 926 317 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B [Streptococcus pneumoniae SP18-BS74] # 1 308 1 306 311 361 59 4e-98 MDVVKEIMAAIKQYETIIIHRHQRPDPDAIGSQVGLAELLRASFPEKNIYQVGGPVEGLE FLAEMDVITDDVYRGALVIVTDTANAPRISDARFSLGDQLIKIDHHPNDEPYGDLVWVNT NASSCSEIIVDFWQQHLAELTMTDNAARLLYAGIVGDTGRFLYPSTSAHTLAVAAQLRTF NFNAADLNRELDQMPLKVAKLAGYIYQNLEIDANGAARVVLPQSILNSYDIVDSETAAIV SMPGKIEDVLSWAIFVEQPEGYYRVRLRSKGPIINTIAKKHHGGGHPLASGANARDAAEI EVIYQEIQAACQEWAQK >gi|237663596|gb|GG668922.1| GENE 336 337594 - 337932 402 112 aa, chain + ## HITS:1 COG:lin0389 KEGG:ns NR:ns ## COG: lin0389 COG2824 # Protein_GI_number: 16799466 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Listeria innocua # 4 111 3 110 111 174 81.0 3e-44 MTEQLPNCPECGSAYAYEDRGLFICPECGHEWSPTEEVAEEGLVVKDSNGNLLADGDSVT VIKDLKVKGASGAIKQGTKVKNIRLVEGDHNIDCKVDGFGPMKLKSEFVKKN >gi|237663596|gb|GG668922.1| GENE 337 337993 - 338304 397 103 aa, chain - ## HITS:1 COG:no KEGG:EF1375 NR:ns ## KEGG: EF1375 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 103 1 103 103 157 100.0 1e-37 MLQPYFAFGVPLFLLVLYLLFALIHRQTTIHYLRFILLLISTFLMVFSFQVLQESWTINP ETLKDAAYSPQWLWIPLGIGLILTLYNAWHGLRTMIKYKTDKH >gi|237663596|gb|GG668922.1| GENE 338 338447 - 339628 687 393 aa, chain + ## HITS:1 COG:L188881 KEGG:ns NR:ns ## COG: L188881 COG4767 # Protein_GI_number: 15673730 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Lactococcus lactis # 1 241 1 236 354 168 43.0 2e-41 MAVYSEPIKWAIIIFPFLAFFISGALLIYEYRKYGSFVWTRAMILYSFVFYLLCAYFLVI LPLPSRAEVAQYTGPTMELRPFHFISGILNETVFSIKDPSTYLPALKQHAVLEPLFNVLL VLPFGVYLRYYFKCSFLKTVLASFLLSLFFELTQLSGLYFIYPRSYRLADVNDLINNTVG GIVGYWLTPLFTFLLPTREEIDATSYEKGQTVSLLRRFFAWGIDWLVIGFVQGLLVFGLN FIPAYKNWATNYPIFSDRMWFFIMVFAVFIVMMKLTNGQTLGKKVVRIRVVETGHEKIRL KALFVRYGYLYFVYGLISIYLANATELLNSSNRMLQMVSLLLYLFCLILYLLFLINVLLT LIRKKRRLFYEKASHTYTVSTLEVAKTKESAGE >gi|237663596|gb|GG668922.1| GENE 339 339691 - 341040 1548 449 aa, chain + ## HITS:1 COG:L0340 KEGG:ns NR:ns ## COG: L0340 COG0513 # Protein_GI_number: 15672392 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Lactococcus lactis # 4 447 3 445 446 552 62.0 1e-157 MPSFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPL MDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLK HQQPHVVIGTPGRILDMMNEQALKVHTAFAFVVDEADMTLDMGFLAEVDQIAGRLPEKLQ MLVFSATIPEKLRPFLKKYLENPVIEHIKPKAVISETIDNWLISTKGKNSNKIIYQLLTI GHPYLAIVFANTKQRVDEITDYLKDQGLKVAKIHGDITPRERKRVMRQVQNLDYQYVVAT DLAARGIDIEGVSHVINAEVPHELDFFIHRVGRTGRNGLNGTAITLYSPADDEAITQIEQ LGVSFKPKEIKNGEIVETYDRNRRTKREKSREELDPTLIGLVKKKKKKIKPGYKKKINWA IEDSNKKKRKIERRQKDRSARKAKKNSSN >gi|237663596|gb|GG668922.1| GENE 340 341587 - 342270 472 227 aa, chain + ## HITS:1 COG:no KEGG:EF1378 NR:ns ## KEGG: EF1378 # Name: not_defined # Def: transcriptional regulator, putative # Organism: E.faecalis # Pathway: not_defined # 1 227 1 227 227 398 99.0 1e-109 MRRILVLTKNILVEQTFQQQLQHLNYEVFCTNCCEETIEHELTFFNYFDAIVLSETLSQN DCLRLLGSLSSLEKPIYRRSQSMCNKREAEIWQERGIIRWLGLKDSLEDIREKIDTVDQS FAEVTAELLDDQVKKIRFTKNEQRFLKILYQHAHEGLDRDQICRLLWQKEPDASTKSQLS FVCKRVKQKFSDAGMNEEIITTSWGKGYQINEQILPYLEQTLFETAQ >gi|237663596|gb|GG668922.1| GENE 341 342616 - 345258 3452 880 aa, chain + ## HITS:1 COG:lin1539 KEGG:ns NR:ns ## COG: lin1539 COG0013 # Protein_GI_number: 16800607 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Listeria innocua # 1 877 1 874 879 1134 65.0 0 MKELTSSQVRQMYLDFFKSKGHSVEPSASLVPVNDPTLLWINSGVATLKKYFDGSVVPEN PRITNAQKSIRTNDIENVGKTARHHTMFEMLGNFSIGDYFKNEAIHWAWEFLTGAEWLAF DPEKLYVTVYPKDTEAKRIWRDEVGLSEDHIIDVEDNFWDIGAGPSGPDTEIFYDRGEEF LDIPEDDPENYPGGENERYLEIWNLVFSEFNHTPEDTYEPLPHKNIDTGMGLERVVSIIQ DAPTNFETDLFMPIIHAVEALGTNVKYGDAPQTDVSFKVIADHIRALSFAIGDGALPSNE GRGYVLRRLLRRAVMHGKKLGINEAFLYKLVPVVGEIMVSYYPEVLQQKDFIEKVVRTEE ERFHETINEGLSMLNEVIKEVKDAKGDTLDGKIIFKLYDTFGFPVELTEEVAEDEGLKVD HAGFETEMEAQRERARSARSKETSMGVQSALLTDIKVESKFVGYTELTHDSELFVIIQGD ALVNEASAGTAELIFAETPFYAEMGGQIADRGYVKNTAGEVVANVVDVKKAPNGQFLHKV EVLAPLAEGQIYQLQVDERMRTRILKNHTATHLLHRALKDVLGEHANQAGSLVAPGHLRF DFTHFGQVTSEELARMEAIVNEKIWEAIPVVTIETDIDTAKNMGAMALFGEKYGKEVRVV NIGDYSIELCGGTHVANTEDIGIFKIVSESGIGAGVRRIEAVTSKEAYQLLQEEERQLKE IATLVKSPQLKEVVTKTEQLQQQLRDLQKENEQLAGKLANQQAGDIFKDVKDINGVRYIA AQVNVKDMNQLRQLADQWKQKELSDVLVLATAQDEKVSLLAAMTKDMNGKGLKAGDLIKA IAPKVGGGGGGRPDMAQAGGKNPAGIADALAEVENWLANA >gi|237663596|gb|GG668922.1| GENE 342 345461 - 346177 901 238 aa, chain + ## HITS:1 COG:lin1490 KEGG:ns NR:ns ## COG: lin1490 COG2384 # Protein_GI_number: 16800558 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Listeria innocua # 1 232 1 233 234 201 48.0 1e-51 MNENQLSKRLATVGDLIPRGSRLADIGSDHAYLPVALMLENKLSFAVAGEVVEGPYQSAK TQVSKSNLTDKIIVRLANGLDAIEPEDQIDVISICGMGGTLIRDILEAGRKKNRLTGKER LVLQPNIGEPTLRRWLMANDYSIIDETIVEENRKLYEIIVAEKTEQSVSYTDQELLFGPV LIKKQGPVFTKKWQRELKQRKTVLAQLAKASGEHIEKQAKLQQDQQLIEEVLANGCER >gi|237663596|gb|GG668922.1| GENE 343 346161 - 347279 1294 372 aa, chain + ## HITS:1 COG:SP1609 KEGG:ns NR:ns ## COG: SP1609 COG0327 # Protein_GI_number: 15901449 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 8 130 6 128 265 161 59.0 2e-39 MAVNGKTLIRRFNDYCPEWLAETGDPVGLHIGTLDKPIENVMVTLDVRPEVVAEAIEKQV DLIIAKHPPIFRPVKRLTTDNFQEKMYADLLKHDIAVYAAHTNMDIIDNGLNDWFCELLG IKQTTFLTKTHTVPYKKLAVFVPIDEAPQMREALGLAGAGSQGDYSKTSYSLIGTGRFTP TQGANPTIGEIGQESVVQEAKIEVIFPETKQEQVLAAMLQAHPYEEPAYDVYTIENQSKE FGLGRVGVLDKPVRFSYFVQQVKEAFQLDGLRVIAKDDTKMIQRVAICGGSGEKFYHDAL RKQADVYITGDVYYHTAHDMIAEDLPVIDPGHYIEALCKPKLVELMNQWKQENEWAVSIF ESEANTNPFRFK >gi|237663596|gb|GG668922.1| GENE 344 347309 - 348538 1739 409 aa, chain + ## HITS:1 COG:L60596 KEGG:ns NR:ns ## COG: L60596 COG2195 # Protein_GI_number: 15673792 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Lactococcus lactis # 2 407 3 408 413 536 66.0 1e-152 MYENLLPRFLRYVKTETRSDATSTTTPSTQTQVAFAQTLKKELEELGMSDVIYNETNGFV IATLPSNVEKDVRSIGFIAHMDTADFNAVNVSPQIVENYDGESTIPLDKEGKFTLNTKDF PNLKNYRGETLITTDGTTLLGADDKSGIAEIMTAMEYLINHPEIKHGTIRVAFGPDEEIG VGADKFDVAQFNVDFAYTMDGGPVGELQFETFNAAQAEITIQGKNVHPGTAKNTMINALQ LGIDFHNALPADEVPEKTAGEEGFYHLAAFAGTPEEATMTYIIRDHNREIFEARKAKIKE IQQTLNAPFDEERIKVDLFDQYYNMREVIEKDMSIVEIAKQAMEELSIQPIIEPVRGGTD GSKISYLGIPTPNIFAGGENMHGRFEFVSLQAMEKATNVIIKIAELNAK >gi|237663596|gb|GG668922.1| GENE 345 348684 - 348950 263 88 aa, chain + ## HITS:1 COG:MA2252 KEGG:ns NR:ns ## COG: MA2252 COG3326 # Protein_GI_number: 20091091 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Methanosarcina acetivorans str.C2A # 1 68 1 70 90 57 43.0 4e-09 MLQGIVIIYFLVINLVLFSMMGYDKKQAKRGNWRIPERRLLTIGLVGGGLGGLMGQKKFH HKTQKPVFALCYSIGVIAMISCIYLTFK >gi|237663596|gb|GG668922.1| GENE 346 348970 - 349998 864 342 aa, chain + ## HITS:1 COG:lin2698 KEGG:ns NR:ns ## COG: lin2698 COG0392 # Protein_GI_number: 16801759 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Listeria innocua # 11 332 14 341 357 65 21.0 2e-10 MKGKVKIGLNMLLMIIVLGVIFYVMDNSLSDIFAQLMETSWLVLIAVIFFGVVYQFAEGR SIKEIARYFNKDFTTVDGFFTSCYVAFYRIISFGTGTLLSEIYFYKKKGIPVSKSVGITA LHMIMYKAAVIFLAIIGLIIQFSLFYENAPKMIPFILAGVILTLVIIAALLILSSSLKLQ VLLVKFANRWFKRPKLRDWVDNCNLQIYSLRAAVQTITQDRSALLRIFSWNVFKLLFWYI IPYIVLVENHPNIDLLLVMSFTSFAVILSGVIPTPAGIGPFEFVYLLLFKPLVGNVDAVA SVLLYRFGSFVLPFLIGLVYVAIEKRKSLRIEIEEIKRQTDE >gi|237663596|gb|GG668922.1| GENE 347 350139 - 350714 386 191 aa, chain + ## HITS:1 COG:BH3017 KEGG:ns NR:ns ## COG: BH3017 COG0746 # Protein_GI_number: 15615579 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Bacillus halodurans # 7 189 5 197 198 81 30.0 9e-16 MAKIIADCTAVLLCGGKSSRMGFDKALLKIQGQYVILQTAEKLMELFEEVILVTNDSQKF PKAFRKCTIIQDMYLGKGPLGGIVTAMNYTQKAEVFVIACDIPTFSPKLVYQLASKRGQN QVTIFDFEGRQEPLFGFYRCSCLPTFQKQLAQNNYQIRQEFERLSVKTVQLSKENQLKNV NRKEELSQWYR >gi|237663596|gb|GG668922.1| GENE 348 350730 - 351554 666 274 aa, chain + ## HITS:1 COG:lin0912 KEGG:ns NR:ns ## COG: lin0912 COG2116 # Protein_GI_number: 16799984 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Listeria innocua # 1 267 1 268 270 230 49.0 2e-60 MDFFSSEEIVASLGDKAEMKGKLSFVRLCILGIMAGFCIALGYLAFIRITGTAPTEWGSF NNFLGGALFPVGLIALTFVGGELATGNMMVMTLGVLQKKVRVGALCYNWIVVLLTNCLGG FLVAYLFGHIVGLTEGAFLDKTVAVAQAKIADPPLVAFVSGIGCNIFVCLAVYLGALAKS YLGKMFGLWFPVMVFVVCGFQHVVANAFIIPAAIFSQSTTISWWDYLQNTLWVFLGNAVG GSLFMAVPLIFMTKPATVKPRVEKTIQTEELYGN >gi|237663596|gb|GG668922.1| GENE 349 351544 - 352125 534 193 aa, chain + ## HITS:1 COG:no KEGG:EF1387 NR:ns ## KEGG: EF1387 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 193 1 193 193 358 100.0 1e-97 MAIEIPNMIQIGSTGRNSGKTTLAEALIKQYQEVYPIYGLKIITISGQRGVCQRGTKGCG ICTSITAGYELVEEQETIGNKDTMKLLAAGCQKVFLLKVFQENLAEAIQQFLKAVPAQAL IICESNSLRNVVQPGLFLMMNNQNRQKESAKKVIDKADFCLLSAEIPKKLRIYYQGEQLQ VSLKRGNKKECVH >gi|237663596|gb|GG668922.1| GENE 350 352113 - 352601 661 162 aa, chain + ## HITS:1 COG:TM0012 KEGG:ns NR:ns ## COG: TM0012 COG1905 # Protein_GI_number: 15642787 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Thermotoga maritima # 8 157 25 175 176 84 28.0 9e-17 MCALSLIEKEAIILENDADPQRILNILIELQFASEEGYIDQETAQLVAEHLHLTEARVYE IVSFYAILKTEPQAKYVLKICNSTPCHYTGGAMVAEVLETILEVPENQPTPDGLFMYHSI PCIGACDLGPVIKIKDTVFSQLTEEKIYQLIQHLQNDCYEGL >gi|237663596|gb|GG668922.1| GENE 351 352613 - 353911 1088 432 aa, chain + ## HITS:1 COG:TM0228 KEGG:ns NR:ns ## COG: TM0228 COG1894 # Protein_GI_number: 15643000 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Thermotoga maritima # 8 417 112 516 545 354 44.0 2e-97 MLKRNQPMLLERMGKMQSATDVAEYCKYDGFDGLKRAISLSDEEILNELDIAHLRGRGGA AYPLGKKWRHLYHAKGTTKYIVCNADEGEPGTFKDKVLLSEDPLSVIEGMIIAGYLFSAK AGYIYMRGEYRRIQKTFQEALDNARQAGFLGENILGIEGFNYDITIISGAGAYICGENSA LLNSIEGKTGRPRVKPPHLADVGLYLQPTLVNNVESFASVPVILREGGQAFLEMGTADGG GTKLICLSGHIKNRGLYEVNLGTPLEEIIYGEQYGGGSATGRALKFIHFGGQSGPIGAVA TLRDCLYSYEDLWAHDLSVGSGAIVVMDDSVNVVDYLVHVAAFFAHESCGKCTPCRLGTT RILELLSKFNRNEATASDLPRLEKMLTHVTRLSACGLGQSVANPMKSALALFPEEFETTA ETEIYATSKGGW >gi|237663596|gb|GG668922.1| GENE 352 353914 - 356634 2439 906 aa, chain + ## HITS:1 COG:AGl347 KEGG:ns NR:ns ## COG: AGl347 COG3383 # Protein_GI_number: 15890285 # Func_class: R General function prediction only # Function: Uncharacterized anaerobic dehydrogenase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 905 30 946 973 749 42.0 0 MKTKLHTQTVTLSIDNQEVTVPKGTTILEAAKGLGVEIPTLCHLKELAPDGSCRMCVVEV EGGRRGGLTTACTAHCQEDMVVATHSEKVADSRRFILDLLLSNHKLECFSCGKNGDCQLQ QYALDYGIDVTSFTEGKRMPCHQEDTSNPFFSYDPEKCIMCRRCARVCQLRQGRDVLSIA NRGFETKMMPSYGQAFDQSICESCGNCVSSCPTGALTAKDTKEYRKWETQKIPTTCPHCG TGCQMNLLVKNNRLVGVEPLDGPANKNLLCVKGKFASYKFVGSGDRLTEPLIKRNGIFEP ASWEEALTLVSSKFNEIKAENGPDALAGFSCSRATNEDNYVFQKMVRAAFGTNNVDNCAR VCHSASVHGLAQTLGSGAMTNPIADITEDVDMILLVGSNPEEAHPVIGAQIRQAIQRGTQ VVVVDPRKINLVKDSALHLQVQAGTNVAFANGMMHVILKEGLADRHFIEERTEGFLDLEK MVADYTPEKVAEICHIHPEDLIQAARMYAKAEKAPIIYCLGVTEHSTGTEGVMSMSNLAM LVGKVGKPGCGVNPLRGQNNVQGACDMGCMPYDFPGYQKVNNPEVIDKFEKAWHVPLNRN TGLTSTKVLPAATAGSVKGLYIFGEDPIVTDPDTGHVRQALESLDFLVVQELFMTETAAY ADVVLPGISYAEKDGTFTNTERRVQRVRKAVEPRGQAREDYEIFCEVMTRMGYPCAYESA KEIMEEISAVTPSFGGINYERLEKESLQWPCRSLTDPGTPIMHVGSFARGKGLFKAIPYK QAQELPDEEYPYLMSTGRMLYHYNTRAMTGRTEGINQIANHSYIEINAVDAQALGIQEGD KVEVHSRRGKIETYAAVGNRVFPQEVFMTFHFPDGNVNEITNAVFDDIATIPEYKVCAVA IKPVNK >gi|237663596|gb|GG668922.1| GENE 353 356652 - 357854 859 400 aa, chain + ## HITS:1 COG:BH3021 KEGG:ns NR:ns ## COG: BH3021 COG0303 # Protein_GI_number: 15615583 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Bacillus halodurans # 2 384 8 396 423 187 33.0 2e-47 MIELEEAREKMTQHMKSQCETEEVALLDSLGRISGETIFAETAIPHFPRAGMDGYAVRAV ETRGATAESPSCLKVVGSLVAGDSMFYCNQTNNCAIKITTGAFIPTDFDAVVPQEWTDFG QDHVKIFRSVTAGQNYAEIGEDIAFQQKILAKHQQINSRMIGLLAMQGIDKVVVLKRMKV GILATGSELVSLEEPLSVGKIYNSNLYMLAAFVKASGNEVIHLDHCSDDPEELAKRLIEI SPKLDVLITCGGVSVGEKDNLPLAIKRIGGTELFHFVNMKPGTPVMGSQFQETLILSVSG NPFAAMVNLHLFYWTLLATFFNCVELNLKERTVILAHELTPSRLRRFYRAKEIDGTVNLV TKSHLSSNLSNTLETNCLLEQPAGVLLKKGALVKVYYWQT >gi|237663596|gb|GG668922.1| GENE 354 358868 - 359350 390 160 aa, chain + ## HITS:1 COG:BS_ydiG KEGG:ns NR:ns ## COG: BS_ydiG COG0315 # Protein_GI_number: 16077663 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Bacillus subtilis # 2 150 8 159 170 144 51.0 5e-35 MNTQGEVHMVDISEKNDTERTALAYGEIHMLEATAEAIQTQMIKKGEVLQVARVAGITAA KRTFEWIPLCHLVALTKCEIQFDWRNQTCLEVRCFTKTVGSTGVEMEALTGVQAALLTIY DMCKAIDRGMTMTNIGLLEKNGGRSGHFIRSSIKSKESDE >gi|237663596|gb|GG668922.1| GENE 355 359356 - 360321 770 321 aa, chain + ## HITS:1 COG:lin1039 KEGG:ns NR:ns ## COG: lin1039 COG2896 # Protein_GI_number: 16800108 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Listeria innocua # 1 321 4 333 333 246 39.0 3e-65 MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEDIK KVKLTGGEPLVRPNLLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGLDGINISLD TLDPEEFREITRVGQLRNVLAGLEQAIDVGLPNIKINTVARKELSEATIVELAEIAKKET VHLRFIEMMPIGLGKEHPGKQQEEVEAILTKYYGTLQPYQKPLGNGPASYYALKDFKGKI GFISALGHCFCETCNRIRITADGHLKTCLHSADGYSLKEALAMEQTAELLGIIKSGIACK PEKHLFLEQQGEQRFMSQIGG >gi|237663596|gb|GG668922.1| GENE 356 360324 - 360758 364 144 aa, chain + ## HITS:1 COG:CAC1991 KEGG:ns NR:ns ## COG: CAC1991 COG2258 # Protein_GI_number: 15895261 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 4 144 3 143 145 130 46.0 7e-31 MKTGEIIAINISPRRGTQKKEIPEVNLIKGFGLENDAHGGNWHRQVSLLSFEEITAFNEK GARVGNGAFGENIIVSGIDLRQLPVGTKMKIGDSELVVTQIGKECHKHCQIYARVGDCIM PREGIFAVVVTEGHIKKGDQLDVV >gi|237663596|gb|GG668922.1| GENE 357 360751 - 361233 244 160 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 [Burkholderia pseudomallei 305] # 4 150 2 169 194 98 39 5e-19 MFKVGIVTLSDRCFQGLAVDQSGPLIREQLPALYQVTKQTILPDEENQLVELLQEWSKTC DLILTTGGTGLSERDRTPEATLRVAERIIPGISEGLRQLSLEKTPFAMLSRGVSVQRGRT LIVNLPGSPKSVTEHLHFLLPVLPHALDLITNKKIIHDEE >gi|237663596|gb|GG668922.1| GENE 358 361237 - 362208 921 323 aa, chain + ## HITS:1 COG:SMc00519_1 KEGG:ns NR:ns ## COG: SMc00519_1 COG0303 # Protein_GI_number: 15965501 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Sinorhizobium meliloti # 8 323 10 320 340 102 27.0 1e-21 MKTIRTEEAVGLPLSHDITRIDYGKTKEVCFKKGHIVVQEDIPILLSLGKKQLFVSLDPA EIHEEEAATFLYNLLTDDSCQPSEVHEGKIVAKASTRGLLKVNREKLIALNEIEGLALST KVTNIEVQKDEKVAAFRVIPLTISKSQLEKARQLSTSEPLISVKPFKKIRVGIVTTGSEV YTGLVEDAFYPVLKAKFSAYPLVTIVKQEIVDDQPQKITVAIKKMLAQGVDLIVCTGGMS VDPDDLTPLAIKQTGAEIVTHGTPVLPGSMFLLAYKGEQTIIGLPGGVLFSEKTVFDLLL PRLMAKEVIKKSEIIDLSYGGYL >gi|237663596|gb|GG668922.1| GENE 359 362227 - 363027 918 266 aa, chain + ## HITS:1 COG:BS_yvgL KEGG:ns NR:ns ## COG: BS_yvgL COG0725 # Protein_GI_number: 16080391 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Bacillus subtilis # 4 262 3 257 260 159 38.0 6e-39 MSKQKKAVFLLSLFSLVALIAACTNQPQKETVSTKKEEITLAAAASLESVMEKKIIPAFE KEHPDIQVTGTYDSSGKLQMQIEKGLKADVFFSASTKQMNALVAEKLINKKSVVPLLENQ LVLIVPNQDQAKWHDFSDLKKAQMIAIGDPASVPAGQYAEEGLKALGAWSYVEKHASFGT NVTEVLEWVANASAEAGLVYATDAATNSKVAIVAAMPEAVLKKPIIYPVGKVAASKKQKS ADAFLNFLQSQQCRKYFENIGFKLTK >gi|237663596|gb|GG668922.1| GENE 360 363036 - 363707 590 223 aa, chain + ## HITS:1 COG:alr2433_1 KEGG:ns NR:ns ## COG: alr2433_1 COG4149 # Protein_GI_number: 17229925 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Nostoc sp. PCC 7120 # 1 216 3 216 223 165 45.0 8e-41 MDVRPILLSFQTAIIAILFTFILGTGVAYIVFRLKNRKLKILLNSLFTLPLVLPPTVFGF FLLTIFGVQQPVGQFLLDFFAIQVVFSWPATVIAAVAVSFPLMYRSALTAFEQMDSELLA VAQTLGFSESRYFRKIALPLSMNGLLAGGVLAFARGLGEFGATTMLAGNIAGKTRTLPLA IYSAVASGDWRLANQYVVIMLLLCLIILFFTEFFSQRAWRRSE >gi|237663596|gb|GG668922.1| GENE 361 363704 - 364708 784 334 aa, chain + ## HITS:1 COG:sll0739_2 KEGG:ns NR:ns ## COG: sll0739_2 COG1118 # Protein_GI_number: 16331977 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Synechocystis # 5 269 40 311 395 233 45.0 3e-61 MRLIVDIQKELKSHTLQIQFETKTQTTGILGASGCGKSMLLKCIAGVETADKGQIVLNDQ VLFDTEKKINLSPQQRKIGLLFQQYALFPHLSVVENLTCVTKDLQLVTQLLASFHLTKVQ QQYPSQLSGGQRQRVAFARMLAAQPAYLLLDEPFSALDAPLKEELQIELQQRLSNLNQHA LIVSHSLDELYKLCQSLVIITKNQTLFGATNQLFNQPQTIEAAKLTGCKNIWPVKRIDAH RVQVIGWQQTLMVTQEVPISCHSIGIRAHDFTTEPQATNQIEVHHLQTLSAPFEQSAWFQ HQQTKIWWKGSNRLNPKVITQLSIPPTAIMPLCL >gi|237663596|gb|GG668922.1| GENE 362 364830 - 366932 2491 700 aa, chain + ## HITS:1 COG:BS_yvgW KEGG:ns NR:ns ## COG: BS_yvgW COG2217 # Protein_GI_number: 16080402 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Bacillus subtilis # 1 694 4 700 702 684 52.0 0 MQKSYKLEGLDCASCADKIEKSVQKIHGVEKARVDFMAEKMTLEVESGHDLEVENEARAV IGKLESDVKVISLKDVKEEEGRNPNKNRLIRIIIAFVLFLALIIIKPSNNWVALASYLVV YVLIGGDIVKRAVTNIFRGEVFDENFLMSVATIGAFFIGEYPEAVAVMLFYQVGEWFQSA AVDQSRKSIAKLMDIRPDSANLLVNGQIKAVAPDTIEIGQQILVKPGEKVPLDGQIIDGS SMVDTSALTGESVPRTVKVGDEILGGFINKNGALTINVTKKFGDSTVSKILDLVENASSK KAPAENFISKFARYYTPVVVVLAILLAVIPPFIFPDTSINEWVYRALTFLVISCPCALVI SVPLSFFGGIGGASKLGVLIKGSNYLEILANTETIVFDKTGTLTKGNFVVQNITSVVLPE EELLRLTATAEQLSTHPIAISIKESYGKETVPATAIEEVAGHGIKATIEGKTVLVGNAKL MKQFGIEAPEVKEAGTLIFVAIDNQFAGYLVIADQLKPDAISAIKELKAEGVKQTVMLTG DNQQVAEAIAKEVGVDKVYAELLPDGKVDRLEELLKASSPKNKVAFVGDGMNDAPVLARA DVGIAMGGLGSDAAIEAADVVIMNDEPSRIASAIKLSRKTLRIVKQNIIFAIAVKIIVLA LGALGLASMQAAVFADVGVTIIAVLNAMRCLRVEKMKDNN >gi|237663596|gb|GG668922.1| GENE 363 366929 - 367021 58 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEQKVKVIFVPRSKPDNQLKTFVSAVLFKA >gi|237663596|gb|GG668922.1| GENE 364 367053 - 367238 75 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|229545914|ref|ZP_04434639.1| ## NR: gi|229545914|ref|ZP_04434639.1| hypothetical protein HMPREF0349_1131 [Enterococcus faecalis TX1322] hypothetical protein HMPREF9509_01699 [Enterococcus faecalis TX0411] hypothetical protein HMPREF0349_1131 [Enterococcus faecalis TX1322] hypothetical protein HMPREF9509_01699 [Enterococcus faecalis TX0411] hypothetical protein HMPREF9496_01076 [Enterococcus faecalis TX4000] # 13 61 1 49 49 81 100.0 2e-14 MIALYRVFSFDAMLRFPPVNQSILAYCTMKKKRSAIFVQILSYYMPQSEKFKDFFTRTLA I >gi|237663596|gb|GG668922.1| GENE 365 367201 - 367644 581 147 aa, chain + ## HITS:1 COG:no KEGG:EF1402 NR:ns ## KEGG: EF1402 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 147 1 147 147 190 100.0 1e-47 MASNEKTRYKAIIADHTYTIIGQESKQHMDLVTKIVNEQLAEIKHLSPQTDTEQASVLLA INAISDQLKKQEYALKLEKQVADLKQKTIRLAELENRVRRMEIIEEEARDVLKKNGQEDV EIHNHVEAQQILNENRKQQIQNKGVSE >gi|237663596|gb|GG668922.1| GENE 366 367664 - 368212 452 182 aa, chain + ## HITS:1 COG:BH3108 KEGG:ns NR:ns ## COG: BH3108 COG1286 # Protein_GI_number: 15615670 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Bacillus halodurans # 1 177 1 175 179 105 33.0 5e-23 MLTILILLLLAFGFYTGAKRGLILQVLYSVGYLISYFVARTYYKEVASHLELYIPYPSVT PTSKLVFFNQEISLDLDKAFYSAVAFLLLLFAGWLVVRFLAIFLHGLTFIPVLKQVNGLL GGVLSVLVLYVGLFLVLATASMIPSDIVQNQFRSSGLARGIVKNTPILTKQAYELWVEPI TK >gi|237663596|gb|GG668922.1| GENE 367 368323 - 370689 2940 788 aa, chain + ## HITS:1 COG:lin1195 KEGG:ns NR:ns ## COG: lin1195 COG1193 # Protein_GI_number: 16800264 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Listeria innocua # 1 788 1 785 785 727 53.0 0 MNQRILSTLGFDKVKQQLLQFIVTAQGTNEVSELLPIADENKIQSWLNETQDGLKVQRLR GGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELTRFFDELSENEVDFERLY MWREQLEVLPELNRQLKQAIDDDGYVTDEASPALKAIRQNIRRSEQTIREELDSIIRGKN ARYLSDALVTMRNERYVIPVKQEYKNIFGGVVHDQSASGQTLFIEPKQILEMNNRLRQQQ IAERNEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQANH VVFKQARHPLLNPEKAVANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPI PVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGT DPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRL LIGVPGRSNAFEISKRLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEAR HYVDESAALHKELKEAYQVFFEEREKELQKARKEANKIIAEAEENAETIISDIRKMQLES GQQGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQRGTL LKDNGKGQWQVQLGILKMNVSEEDMTPVAPQKEAKPRVTTVRSAESSHVGTQLDLRGKRY EEALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEFAPQNQGGN GATVVKFQ >gi|237663596|gb|GG668922.1| GENE 368 370787 - 371101 564 104 aa, chain + ## HITS:1 COG:SPy1835 KEGG:ns NR:ns ## COG: SPy1835 COG0526 # Protein_GI_number: 15675662 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Streptococcus pyogenes M1 GAS # 1 102 1 102 104 149 74.0 1e-36 MTQAITDKDFATETDEGLVLIDFWATWCGPCRMQAPILEQLSEEYDEDEVKIVKMDVDEN PATPASFGIMSIPTLLLKKDGEVVEKAVGVHTKDQLQAMIAKHL >gi|237663596|gb|GG668922.1| GENE 369 371266 - 373062 1694 598 aa, chain + ## HITS:1 COG:lin1197 KEGG:ns NR:ns ## COG: lin1197 COG0322 # Protein_GI_number: 16800266 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Listeria innocua # 2 588 3 590 603 855 71.0 0 MNERIKNKLALLPDQPGCYLMKDKNGTIIYVGKAKILKNRVRSYFRGSHDTKTERLVSEI DDFEYIVTESNIEALLLEINLIHKNNPKYNIMLKDDKTYPFIKITNEKYPRLMITRKVLK DKALYFGPYPDVNAANETKKLLDRLFPLRKCNPSQKTPCLYYHLGQCLCPYAFDVDPQVY KDMVEEIKGFLSGGHTEIQDRLQEKMAYAAAHMEFEKAAEFRDQIKAIETVMTRQKMTNV DLIDRDVFGYAVDKGWMCVQVFFVRQGKLIERDVSIFPFYDDASEAFLTFIGQFYQENEH FVPKEVLIPDDIDKESVEALLATKVLQPQRGEKKKLVKLASKNAAVALNEKFDLIVRKQE RTIGAVEKLGNAMNIPAPIRIEAFDNSNIMGTNPVSAMVVFIDGRPAKNEYRKYKIKTVQ GPDDYASMREVIYRRYSRVLKEGLPFPDLILIDGGKGQVDVAKDVLANQLGVDIPVAGLA KNDKHKTSELLFGPNLEVVPLERNSQEFFLLQRIQDEVHRFAITFHRQLRSKNSFASKLD NIEGLGPKRKKNLLKEFKSLKNITAASVEELRKAGLPETVAKNVYRHLHQETTSEIEK >gi|237663596|gb|GG668922.1| GENE 370 373214 - 373471 287 85 aa, chain + ## HITS:1 COG:no KEGG:EF1407 NR:ns ## KEGG: EF1407 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 85 1 85 85 165 100.0 7e-40 MKILTPVYQIKFKKVPNQLLIDERLMNELGRWLNRTGRIWACQSSKSAKEFKNTFYESTG LSANEVYISAETDGLFRLAENKASD >gi|237663596|gb|GG668922.1| GENE 371 373576 - 374475 276 299 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 2 290 5 298 311 110 26 9e-23 MLEVKELVKTFGDFKAVDHVSFTIPDGKILGLIGQNGAGKTTTFRLILNFLTQDSGSVLW NGQPLNEKEYNIIGYLPEERGLYPKITIEDQLIYFASLRGKTKKEIEPKIDFWMEKFQVK GKKTDKVKSLSKGNQQKVQLIATLIHEPKLIILDEPFSGLDPVNAELLKDGIIELKNQGS CVIFSSHNMDNVEKICDHLVMLKNGRMVLDGQVHEIRQQFGRTKLFLESPLSVEEVAATA GVKEAHLRQDGVLEATLENAEVGKVLFDKATANGYIPMFNQQPPTLEEIFKMKVGGQDE >gi|237663596|gb|GG668922.1| GENE 372 374468 - 375730 1129 420 aa, chain + ## HITS:1 COG:SP1716 KEGG:ns NR:ns ## COG: SP1716 COG1668 # Protein_GI_number: 15901550 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: ABC-type Na+ efflux pump, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 411 1 397 399 202 32.0 1e-51 MSKFWIIATDVYKKNVKSLSFLIMILAPFLLVGIVYLAGSLASGFSGDTTIGLVSENQAL VKELTKNKTEDFSFKAVSSEKKAQEQLKDEKIDAYLLLDTTDNQISGQLYSERSLGNATE MLIPQMLNQLQTMANANRLNLTAEQVAMLNQQATFKKAKISFDENGKIKTGEDNTGIQMA LAMGITILLFVFISSYSSIIAQEIASEKGTRIMEVILSSTKAQTHFYGKLTGVILVALTQ IFIYGVAFVLGYSQLKNLDFMKSLLSGISPQSIFSSTFIFTLGFFIIGILVFAVLAALCG SLVSKPEDTAKAVQPIMYIGLIGYMIGITFGTNDPQNIVVKVTSFIPLISSYIMPVRLAT ETASTMEAIVSLVILAVFGIILTIFSARLYKSNVLVYSEGGMIQSLKQSISILKNEQKHK >gi|237663596|gb|GG668922.1| GENE 373 375766 - 376764 1009 332 aa, chain - ## HITS:1 COG:lin0539 KEGG:ns NR:ns ## COG: lin0539 COG1609 # Protein_GI_number: 16799614 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 1 321 1 321 322 266 42.0 5e-71 MTSIIDVAKVAGVSKSTVSRLISGKGYVSADSQEKILKAMKELNYTPNYVARNLRAGATK TIGFLAPSYLGSLGIFLNRFISIAKKYNYSVTLFFTDGDQQKEIDALNQLKYKQLDGLFL LTRTNEWSVIEPYSAYGPLATWHRIDSPNIYSSYIDHYSGYYRSLEYLQQQGYQKIGHVL GNPENLNTHARKRAMKDFYENTQAPWQTEWLINDQYTNHSGRKIAHYWQQLTDKPEALAF YNDHVAAEFISELENLNYAVPRDVAVIGFDNSYVSELMHITTVDYAIQYQAENSFIYLYN QLNQTNIPEKKLTVRLVERRTVPKKDPADQSL >gi|237663596|gb|GG668922.1| GENE 374 376906 - 378300 1567 464 aa, chain + ## HITS:1 COG:lin0540 KEGG:ns NR:ns ## COG: lin0540 COG1486 # Protein_GI_number: 16799615 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Listeria innocua # 1 440 1 439 440 629 67.0 1e-180 MTRGALKIATIGGGSSYTPELIEGYIKRKDELPIKEIWLVDIEAGKEKLEIVGAMAKRMI KAAGLDWEVHLTLDREAALKGADFVSTQFRVGLLDARIKDERIPLSHGVLGQETNGAGGM FKAFRTIPVILAIIDDMKRLCPDAWLVNFTNPAGMVTEAAIKHGGWKKTVGLCNVPIGHR KQAAEMLGIPEEDLFFKFAGINHFHWHRVWDKEGQERTQELIDLIYGPKQEQESHLKNIF DAPFHYEQLKDLGMLPCGYHRYYYIEDEMLKHSIEEYERGETRAQVVKETEGRLFELYKD PKLDYKPKELEERGGTHYSDAACEMIASIYNDKRTDMVVSTENNGTITDLPYDCVVEVSG PVTAHGHEPYNWGAFPPAARGIIQNMKAMEETVIRAAINGDYGAALHAFTINPLVPGGVM AKTLLDELLIAHKAHLPNFADAINKIEETQPETVTYVAELMKSN >gi|237663596|gb|GG668922.1| GENE 375 378326 - 378760 573 144 aa, chain - ## HITS:1 COG:no KEGG:EF1412 NR:ns ## KEGG: EF1412 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 144 1 144 144 240 100.0 1e-62 MKITLTRKTSAWGALRYFTFYKNGVHQGKLFTNVPIEIEADPGDVLTFYEGWFQFYRRIE VTEDTKEITIINSKKLQHVFYTCVVLFLILTLLFLSAQKLSTFIIAEILIYSGIQWLFRQ QTYHFTVKKKTESFASYSKKSIAH >gi|237663596|gb|GG668922.1| GENE 376 379048 - 380544 1224 498 aa, chain + ## HITS:1 COG:BH1900 KEGG:ns NR:ns ## COG: BH1900 COG0488 # Protein_GI_number: 15614463 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus halodurans # 20 497 2 478 538 280 36.0 4e-75 MRTQDSFVSEMKEEGKMKKLSIHLKDVSIHFSGKPILEIDELFVYENEKIGIIGKNGAGK STLLNLIMGKIQSDKGKVQRLNDFHYLAQVAEEITNESEKTDKNCLLNQKNQKLSGGEKV QKRLATLFSEYPTGVILDEPTTHLDKEHRQLLVADLTYYYGTVLFVSHDRFFLNQLAEKI WEVSDGHVKEYLGNYDAYCRQKELEQQTQYNVYHQYQKEKKKLQESYAKKQAQAQKSSHV SKKQKQKQIKPSRLAGSKQKDTVQKALQKQAKAINARIDRLPDVAQAKQERKIIFPTNNQ FSLYNPYPIRIENLTFAYENRTILNQVNVQIPLNEKIALCGKNGAGKSTFLQQIEARHPA IYFSPKVRLGTYHQLDYRLKNDEPLLTYLLKRTNYSEKIVRSLLYRLGFQQENLQTKISS LSGGEAIKITLAQLFIEPNNIILLDEPTNFLDLDTIQALEEFISAYQGTVIFTSHDETFV EKVATRTIYLENGKIIDK >gi|237663596|gb|GG668922.1| GENE 377 380585 - 381871 1139 428 aa, chain - ## HITS:1 COG:L56208 KEGG:ns NR:ns ## COG: L56208 COG2081 # Protein_GI_number: 15672240 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Lactococcus lactis # 2 420 6 422 423 520 62.0 1e-147 MKKFDVIIVGAGTSGMMATIAAAEAGAQVLLIEKNRRVGKKLLMTGGGRCNVTNNRPAEE IISFIPGNGKFLYSAFSQFDNYDIMNFFESNGIHLKEEDHGRMFPVTDKSKSIVDALFNR INELGVTVFTKTQVTKLLRKDDQIIGVETELEKIYAPCVVLTTGGRTYPSTGATGDGYKL AKKMGHTISPLYPTESPIISEEPFILDKTLQGLSLQDVNLTVLNQKGKPLVNHQMDMLFT HFGISGPAALRCSSFINQELTRNGNQPVTVALDVFPTKSFEEVLKNVDYMIEEQPNKVAK NAFHSLIPERLLTFYLEKLAIEEVPAKQLTEKQRLSFVELLKDFQFTVTKTLPLEKSFVT GGGISLKEVTPKTMESKLVNGLFFAGELLDINGYTGGYNVTAAFVTGHVAGSHAAEIAEY TYLPIEEV >gi|237663596|gb|GG668922.1| GENE 378 382009 - 383355 1665 448 aa, chain + ## HITS:1 COG:lin0569 KEGG:ns NR:ns ## COG: lin0569 COG0334 # Protein_GI_number: 16799644 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Listeria innocua # 3 448 14 458 458 554 65.0 1e-157 MDAKQYVKNIQEKIHQLDQGQTEYLQAVDEFLPTVEGFLEKNPQYIEANVLGVLIEPERI FQFRVPWQDDQGNWHVNRGYRVQYNSAIGPYKGGLRFHPSVNLSVMKFLAFEQIFKNSLT GLPIGGGKGGSDFDPKGKSDAEVMRFCQSFMTELQKHIGPSTDVPAGDIGVGAREIGYLF GMYKRLRNYDAGVLTGKPLGYWGSQARTEATGYGTVYFVKHLLADKNDTFEGKKVAVSGS GNVAIYAMEKATELGATVITCSDSSGFVYDPEGIDVALVKELKEKNRERISKYVETRKGA TYYDKESVWNFETAYDIALPCATQNEINEKQAAILVKNGVKVVAEGANMPCTLEAVAVFA KSAVIYCPGKAANAGGVAVSALEMSQNAERLAWSFEKVDGMLDQIMQNIYETCRDTANEY QARDNFVLGANIAGFEKVAAAMLSQGLV >gi|237663596|gb|GG668922.1| GENE 379 383537 - 384886 1917 449 aa, chain + ## HITS:1 COG:SP2070 KEGG:ns NR:ns ## COG: SP2070 COG0166 # Protein_GI_number: 15901889 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Streptococcus pneumoniae TIGR4 # 1 449 1 449 449 684 74.0 0 MSHIQLDYSKLAPFVADHELEYMQTQVTAVDKALREGTGAGNDFTGWIDLPENYDKEEFA RIKKAAAKIQSDSEVLVVIGIGGSYLGARAAIEFLTHSFNNLLSKEERKAPQIFFAGNSI SSTYLADLINVIGDRDFSVNVISKSGTTTEPAIAFRVFKELLINKYGKEEANKRIYATTD RAKGAVKVEADAEGWETFVIPDDVGGRFTVLTPVGLLPIAVSGADIDRLMEGANDARKEY GATSDLKENQAYQYAALRNILYRKGKTTEMLINYEPGMHYFSEWWKQLYGESEGKDGKGI FPAAADFSTDLHSMGQYVQEGMRNLFETVVKIENPRHSISIPEQNEDLDGLGYLQGKEID FVNTKAFEGTLLAHTDGGVPNMIVKVPTMDAYSLGYVMYFFEIAVGISGYLNGVNPFDQP GVEAYKRNMFALLGKPGFEELAKDLNARL >gi|237663596|gb|GG668922.1| GENE 380 384952 - 385131 230 59 aa, chain - ## HITS:1 COG:no KEGG:EF1490 NR:ns ## KEGG: EF1490 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 59 1 59 59 85 100.0 5e-16 MRNTWLAEQLQSISEEPNSFIIEETIKYIEQLEDDNESLQVALEGTIWSPKKWNEPLEK >gi|237663596|gb|GG668922.1| GENE 381 385190 - 385633 578 147 aa, chain - ## HITS:1 COG:SPy1984 KEGG:ns NR:ns ## COG: SPy1984 COG1780 # Protein_GI_number: 15675774 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Streptococcus pyogenes M1 GAS # 1 145 4 144 160 138 47.0 3e-33 MNIRYISISGNTRSFVQRLTTYSEEQHQHNEKNPTITFKEISENSPLEVETEPFFTFVPT YLDGGDGINNGNTEILTEVMREYLAFENNYRYCSGVVGSGNKNFNHQYCLTAKQYAEQFN FPFLADYELRGTQADIERIYAILKENQ >gi|237663596|gb|GG668922.1| GENE 382 386005 - 386328 541 107 aa, chain + ## HITS:1 COG:no KEGG:EF1492 NR:ns ## KEGG: EF1492 # Name: not_defined # Def: V-type ATPase, subunit F # Organism: E.faecalis # Pathway: not_defined # 1 107 1 107 107 112 100.0 4e-24 MVQEVLEQIKAAEDAVEEHRQQAKMNCRLYEEQKQERLAELRQESEEAVEKVLTDSLATQ EKMLQLEKEQLLDETKRTEQALHERYEANKEQVIDSIIERVKDVYGS >gi|237663596|gb|GG668922.1| GENE 383 386318 - 388297 2007 659 aa, chain + ## HITS:1 COG:SP1322 KEGG:ns NR:ns ## COG: SP1322 COG1269 # Protein_GI_number: 15901176 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit I # Organism: Streptococcus pneumoniae TIGR4 # 1 659 1 662 663 357 35.0 4e-98 MAVSKMEKMTIIAAAEKEAAILQAIQGLQIVEVKRIFHSPEEEQALKSQYSFLQAEQSTE QLRKYETMLQQLQELLLFLTRSSGKGLKIKRKVYTLEELEQTFDEETLQSYLTELKNIQE SLKQIQTDRQGLEAEEELLGRWQYLDVLPHKQQLKSSYVVHGSINLANKASFLSALSQWP TVYFEEIYQSMHHSYFTLVYLKEHQQSVTELLNQYSFEPLQYRYDVPPKEAYQQVKERYE ILQKEEKALKQQLASYHDFYETFCLAEEVLLAVIQREQARQHLLNASSFFILQTWIPVEE KAEILTAIEEKVPKDEIALTFENPTKAEIETDIPVKLANNKLVQPFEMLTEMYSLPKYEE VDPTPAMMPFYLVFFGMMVADIGYGLLMLLLSIIALKAFVLPRGMKRFADFFLILSFPTI IWGFIYGSFFGAALPPIMFGIKSPFPILSTTEDVNTILILSVIFGFIQLVVGLMINGIQL SKQKRYLDSINESYAWLGILFGLALLVVGKLVVKNEGLFTAGAILASLSAIAIIVIPMIQ SKAKLKGLAKGLYGLYGVTGYVGDLVSYTRLMALGIAGGSIASAFNMLVEFMPPVARFSV GILLLIVLHALNIFLSLLGAYVHGARLQYVEFFGKFYTGGGRAFNPLKTKEKYVNVEKK >gi|237663596|gb|GG668922.1| GENE 384 388325 - 388798 813 157 aa, chain + ## HITS:1 COG:SP1321 KEGG:ns NR:ns ## COG: SP1321 COG0636 # Protein_GI_number: 15901175 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Streptococcus pneumoniae TIGR4 # 10 156 12 158 158 142 60.0 3e-34 MMDYLINNNGGIVFAVLGMAMATIFAGIGSAKGVGFTGEAAAALTTEQPEKFGQALILQL LPGTQGLYGFVIAFLIYINLGNDMSMVQGLNYFVAALPIAFAGLFSGIAQGRVAAAGIQI LAKKPEHATKGIIYAAMVETYAILGFVISFLLVLNVK >gi|237663596|gb|GG668922.1| GENE 385 388815 - 389396 906 193 aa, chain + ## HITS:1 COG:no KEGG:EF1495 NR:ns ## KEGG: EF1495 # Name: not_defined # Def: V-type ATPase, subunit E # Organism: E.faecalis # Pathway: Oxidative phosphorylation [PATH:efa00190]; Methane metabolism [PATH:efa00680]; Metabolic pathways [PATH:efa01100] # 1 193 1 193 193 254 100.0 2e-66 MDAIEKIISEIKQQGKQEVEAYVTSEQTRIDQEFQAAQQEILLKQEHEIEKRQQQLLKEF KQRQQRQTLEIRQDALNKKQAYLNQLFDEVVLKMSEWSAEEFQQFMKAQLGSLELTGKAT ILLGEYSQTKVTQEWLTALSDATVQWELSEEVVPKESGFIVAKDGLDYNFLFSALVEEIQ KTEGFKVAEKLFS >gi|237663596|gb|GG668922.1| GENE 386 389413 - 390414 1022 333 aa, chain + ## HITS:1 COG:SPy0151 KEGG:ns NR:ns ## COG: SPy0151 COG1527 # Protein_GI_number: 15674361 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit C # Organism: Streptococcus pyogenes M1 GAS # 4 330 2 331 332 122 29.0 1e-27 MRKPTYHQINPLIRLKETELLSEQQFQQLLEAETVEDVKNMLKSTVYQPYLTETFEEKFD YHSSEALGSLYRWLYEMAPEPAVVTLYTMRFTFHNLKILTKAERTGKDFDYLYLEDGRYS LNTVKSAIHTKNSSELEPALLEVIRDVFAYLEEGGLPQAIDILYDRAFLQQQRKLADELG YEELTKEVIAFIDLTNLSTMARGIVQHQNSNFLSTVLSSAGSITKKELLTYAEKSLVEFT AFVRTTNYGQLLEKIINKETNELNLLAFEKLKDDYLTSMYENGRTVAFGPLPLLAFLNAK EVEWKNLRLILVGKHSGFSNEKIRERMRKVNGV >gi|237663596|gb|GG668922.1| GENE 387 390404 - 390715 417 103 aa, chain + ## HITS:1 COG:FN1737 KEGG:ns NR:ns ## COG: FN1737 COG1436 # Protein_GI_number: 19705058 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit F # Organism: Fusobacterium nucleatum # 3 103 5 105 105 99 48.0 1e-21 MGYKIGVIGDKNSILPFKLFGFEVHHAISEMQVREAIETMAKNKFGVIFITEEASTLAEE TIERYKEQVTPAIILIPSHNGTIGIGLSEIEKNVEKAIGQNIL >gi|237663596|gb|GG668922.1| GENE 388 390733 - 392514 2262 593 aa, chain + ## HITS:1 COG:SPy0154 KEGG:ns NR:ns ## COG: SPy0154 COG1155 # Protein_GI_number: 15674362 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit A # Organism: Streptococcus pyogenes M1 GAS # 1 590 1 591 591 853 71.0 0 MQIGKIVKVSGPLILAENMSDASIQDICHVGDLGVIGEIIEMRGDVASIQVYEETTGIGP GEPVISTGEPLSVELAPGLIAEMFDGIQRPLDTFQEVTHSNFLGRGVKIDALDREKKWTF EPTVAVGEEVSAGDIVGVVQETPIIQHKIMVPFGVSGTIAEIKAGDFAIDETVYSVETAK GTESFSMMQKWPVRRGRPILEKLSPKVPMVTGQRVIDTFFPITKGGAAAVPGPFGAGKTV VQHQIAKWADVDLVVYVGCGERGNEMTDVLNEFPELIDPTTGESLMNRTILIANTSNMPV AAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGS RLAEYYERAGQVIALGKDHREGSITAISAVSPSGGDISEPVTQNTLRVVKVFWGLDSQLA QKRHFPSINWLQSYSLYSTEVGQYLDLELQGNWAAMVAEGMRILQEESQLEEIVRLVGID SLSDKDRLTLETAKSLREDYLQQNAFDDVDTFTSRTKQAKMLQLILTFGEEGQKALSLGT YFSELMAGTVEIRDRIARSKYLPEEELEKLDRLQAEIKTTIKEIIAEGGMTND >gi|237663596|gb|GG668922.1| GENE 389 392507 - 393883 1825 458 aa, chain + ## HITS:1 COG:SPy0155 KEGG:ns NR:ns ## COG: SPy0155 COG1156 # Protein_GI_number: 15674363 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit B # Organism: Streptococcus pyogenes M1 GAS # 1 454 3 456 471 763 81.0 0 MIKEYRTINEVVGPLMIVEKVAGVKYEELIEVRMQNGEIRQGQVLEINGDKAMVQIFEGT SNINIRDSKVRFLGHPLELGVSPDMMGRVFDGLGRLKDNGPELLPEKKLDINGEVINPVA RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGLPHKELAAQIARQANVLNSEEEFAVV FAAIGITFEEAEYFMEDFRQTGAIDRSVLFMNLANDPAIERIATPRMALTAAEYLAYEKG MHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLYTNLATLYERAGRIRGSKGSVTQ IPILTMPEEDKTHPIPDLTGYITEGQIILSRELYKSGIQPPIDVLPSLSRLKDKGTGEGK TRGDHAATMNQLFSAYAQGKQAKELAVILGESALSDVDKIYAAFAQRFEEEYVNQGFDTN RSIEETLDLGWELLSMLPRTELKRIKEDMLDQYLTEGK >gi|237663596|gb|GG668922.1| GENE 390 393888 - 394523 700 211 aa, chain + ## HITS:1 COG:FN1733 KEGG:ns NR:ns ## COG: FN1733 COG1394 # Protein_GI_number: 19705054 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit D # Organism: Fusobacterium nucleatum # 1 207 1 206 211 196 56.0 3e-50 MARLNVNPTRMELSRLKKQLTTATRGHKLLKDKQDELMRRFIALVKENNELRIQVEQEVT DALSNFVLANATLNEAFIEELVAIPAEKVELEIIEQNILSVPVPKMIFDYDESVQEAPLD YGYVNSNSELDQAFAKISSILPKLLALANVEKTCQLLSKEIEKTRRRVNALEYMTIPQLE ETIYYIQMKLEENERGEITRLIKIKSMNKEN >gi|237663596|gb|GG668922.1| GENE 391 394598 - 394918 453 106 aa, chain + ## HITS:1 COG:no KEGG:EF1501 NR:ns ## KEGG: EF1501 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 106 1 106 106 194 100.0 8e-49 MKNEERRKAIALNCQKYESDYARLVEPINELLLNLGAAISEEAAKQIILNVKRYHHGVKY LPECHLDESNQFIEDGLEALKKGDLGNGALQLFGAGLNFASFAAKA >gi|237663596|gb|GG668922.1| GENE 392 395067 - 395657 617 196 aa, chain - ## HITS:1 COG:no KEGG:EF1502 NR:ns ## KEGG: EF1502 # Name: not_defined # Def: beta-lactamase, putative # Organism: E.faecalis # Pathway: not_defined # 9 196 126 313 313 365 99.0 1e-100 MPTRLLLVKKKWTDLIPYNAEEDYEEGTGIIAYNIQPEYPLKTLQEYAITYSDNIAKNML YDTLGGDAKAKREMYQRYLHKTPSIEEPQFSSEDALVILQKLYTEKATKPDYQAIYDSMK QSVFHERMETPTTQGKVAHKIGSYDEFIHDMGILETPHPFALAIFTKGPDNAKSAAFIAS VTDKLWQLQVSEYPNQ >gi|237663596|gb|GG668922.1| GENE 393 395602 - 396009 280 135 aa, chain - ## HITS:1 COG:no KEGG:EF1502 NR:ns ## KEGG: EF1502 # Name: not_defined # Def: beta-lactamase, putative # Organism: E.faecalis # Pathway: not_defined # 1 128 1 128 313 244 100.0 1e-63 MKKQQLSLYGTIFFLCFFLIVGFFFSSRGEDYAKESEQKVTIDSAKHEKHTKDKEENNSA NTVFFDKINDLLVASVKEFEGTVGISYLDLETGEQRSVNGQHEFYTASTIKVPLTMLVAD TVASGQKKMDRPDSL >gi|237663596|gb|GG668922.1| GENE 394 396104 - 397984 1603 626 aa, chain - ## HITS:1 COG:BS_fbp KEGG:ns NR:ns ## COG: BS_fbp COG3855 # Protein_GI_number: 16081071 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 7 619 47 662 671 663 53.0 0 MATLNRDQQIEEIINLEAILNLPKGTEHFVSDLHGEFEAFDHILRNGSGRIREKVQFLFK QELNAHQMDELCFIIYYPEEKLTLLENESALSYEWWLLTIRRLVEIVRSSSMKYTRSKVR KALPETYGYILEELIYQYDETTTKNGYYQQIIEKIILLGEAKRFVTELAYLIQRLIIDHL HVIGDIYDRGPAPDKIMDRLMSYHSLDIQLGNHDMIWLAAYSGSLACLANVVRICARYGN LDLLEERYAIDLTALKKFSLETYKENPAFAPKKNPYRALTEAEKQVAMRVQQAIAIIQEK LEGQIIGRRPDFNLAHRLRLDKIQGETITFDECRYTLINSCFQTVSEEQPYQLTREEKQI IDDLLTQFQSSPRLTKHMRFLMEKASLYLVYNQNLLIHGCLPLNADGTFQAYTFKGHSYS GKALVDFFQEMLEEAYAQPASTDDYATDCLWYLWCGEGSSLFGKRAMKTFERYFLAEKET HYEEKNPYYSLRDTVEVCERILDEFEVTGENRHIINGHTPVKRTKGESPIKANGTLLVID GGFSKSYQTITGIAGYTLLYNSFGLQLTAHKSFSSKETAILNNQDIHSIKQVIDRPLQRL LVKDTTIGKELLKQSQALQKQMKQNQ >gi|237663596|gb|GG668922.1| GENE 395 398067 - 398165 64 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPIIVGYLAKKSNRRKSEKNVENYRKLLGFML >gi|237663596|gb|GG668922.1| GENE 396 398200 - 399492 1391 430 aa, chain + ## HITS:1 COG:BS_lysA KEGG:ns NR:ns ## COG: BS_lysA COG0019 # Protein_GI_number: 16079395 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Bacillus subtilis # 2 429 3 430 439 531 58.0 1e-150 MLFGTAKMNRENHLEIGGCDTVKLAQKFGTPLFVYDVAHIRAQARGFKQTLNQLGIKNKV VYASKAFSCLAIYQVLKEEDIACDVVSGGELFTALKGGMEPAEIEFHGNNKTPEELRYAL DNKIGTIVIDNFYEIDLLEELLATRNQTQKVLFRVSPGVDAETHDYILTGQEDSKFGFDV ASGQATEALVRLLSNPSFDVQGVHCHIGSQIFAVEGFLAAVEKMFTILEDWRQVHQFTAR VLNMGGGFGVQYTQQDEPLAPATFVEKIVYSLKGHCEQLGYPLPELWIEPGRSLIAEAGT TIYTVGAQKEVPGVRHFVSVDGGMGDNIRPALYQAVYDGFLANRDGHDSVKEVTVVGKYC ESGDVLLRDILLPEVKAGDLLAISSTGAYGYSMASNYNRNPRPAVVFVEDGQAKLVARRE TYEDMTTLDC >gi|237663596|gb|GG668922.1| GENE 397 399638 - 400630 845 330 aa, chain + ## HITS:1 COG:SPy1892 KEGG:ns NR:ns ## COG: SPy1892 COG1073 # Protein_GI_number: 15675706 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Streptococcus pyogenes M1 GAS # 105 320 91 305 308 204 50.0 2e-52 MKWLLGLLIIFAIIGVVFSFYIANYFLKIALLKDNPWYHKKGHRLLNPDNFQERETRYTK IEEQQKQEGEAFWTESFAEDRWLKIKDETLYARCFIPYPDNHRWAICVHGYRSNGKRDMA YTALRFAEEGYNVLVPDLRAHGKSSGNKIGMGWLDRLDLLSWLSEVLAIDMEAEIILVGG SMGAATVMMASGEKLPTNVRGLIVDCGYTSVYDEFKYVLHESFHLPAFPILTIANQLALN NYGFQLKTASSVRQLHKNTLPTFFIHGTGDRFVPMTMFEENLAATQGIKKGLIVAKAPHL SSSVYEPENYYSSIFEFLEENCPAVKTISD >gi|237663596|gb|GG668922.1| GENE 398 400646 - 401179 328 177 aa, chain - ## HITS:1 COG:no KEGG:EF1506 NR:ns ## KEGG: EF1506 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 177 1 177 177 281 100.0 1e-74 MEMYQVIRYFLNEMEKKIWHALLTLVLFCLYISIFDVPFTIKNTFIGRLLFPKAFMNAGS ANLIFYLISFFGFLWSIFIFAYLLNKTRLKLLNKTFPYLLEILEVCILPLVILFAYIYIY LRVHGEGFSYIRESLLQQELTYSMKWFLCLGSLAPLFFFLSTLNLTKRVRQKKDMES >gi|237663596|gb|GG668922.1| GENE 399 401467 - 401850 230 127 aa, chain + ## HITS:1 COG:no KEGG:EF1507 NR:ns ## KEGG: EF1507 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 127 1 127 127 241 100.0 9e-63 MAEITVKTISEKDDLKKLFLGQEYDQQQPVKNILKARTSNVHIEKYEVVEDVFLKLTGKA TAHKDIMNSFWTTYKIMLQLVYPDFFRPAEVIGENQESYLEKPSEQNFLAVNSKYPPHDS GPIFNLF >gi|237663596|gb|GG668922.1| GENE 400 401819 - 402301 160 160 aa, chain + ## HITS:1 COG:no KEGG:EF1508 NR:ns ## KEGG: EF1508 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 160 1 160 160 305 100.0 3e-82 MIPDRYLTYFDQVFPDYLPNPVPKKYTWNEFLLDNFTKFERVHQDPQLKRFAELTHSIGN ITVVPLGFNSGRSLSFKDYWDYSLEQLSIFLASFHSWESYVHTYEMQPFLNEQYQPVALW KNHLKKDSFILPQNIEEINEYLVQVNQRIEKRGQRIVNRL >gi|237663596|gb|GG668922.1| GENE 401 402514 - 403053 482 179 aa, chain + ## HITS:1 COG:no KEGG:EF1509 NR:ns ## KEGG: EF1509 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 179 1 179 179 360 100.0 2e-98 MQFTLLNQENQAYWEATYIEAFPEEERLPFDQLLMSSQAGKFHLFVIQEADENVGILLNS PIAPEATYVFFFAIDQHHRNKRLGSTVLALLKTRYPKGVLLESEEIGKNAANEAQREKRY QFYERNGVLDTGYLIMDRGLTFHIMFAGASGFGGTQLQFLLDFHPVAKIWKKPSIDGIR >gi|237663596|gb|GG668922.1| GENE 402 403151 - 403495 619 114 aa, chain - ## HITS:1 COG:L106356 KEGG:ns NR:ns ## COG: L106356 COG2151 # Protein_GI_number: 15672865 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Lactococcus lactis # 9 114 6 110 110 149 73.0 1e-36 MSEQPQQRSTEEVEAIKEDILTALETVIDPELGIDIVNLGLIYEVEFAEETGDTVIKMTL TTMGCPLADVLTEQIHGVLKDIPEVNNIEVKLVWYPAWTTDKMSRYARIALGIR >gi|237663596|gb|GG668922.1| GENE 403 403771 - 404835 1067 354 aa, chain + ## HITS:1 COG:FN1586 KEGG:ns NR:ns ## COG: FN1586 COG4948 # Protein_GI_number: 19704907 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Fusobacterium nucleatum # 1 352 13 365 375 277 43.0 3e-74 MKIKQVHVRASKIKLKETFTIALGTIESADSAIVEIETEEGLVGYGEGGPGIFITGETLA GTLETIELFGQAIIGLNPFNIEKIHEVMDKISAFAPAAKAAIDIACYDLMGQKAQLPLYQ LLGGYDNQVITDITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTGIEADIARVKAIREAV GFDIKLRLDANQAWTPKDAVKAIQALADYQIELVEQPVKRRDLEGLKYVTSQVNTTIMAD ESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCMAEETTIG ITAAAHLAAAQKNITRADLDATFGLETAPVTGGVSLEAKPLLELGEAAGLGISH >gi|237663596|gb|GG668922.1| GENE 404 404852 - 406228 1029 458 aa, chain + ## HITS:1 COG:TM0007 KEGG:ns NR:ns ## COG: TM0007 COG1305 # Protein_GI_number: 15642782 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Thermotoga maritima # 5 455 1 438 438 316 41.0 5e-86 MKYDLKYLSVPLPEEIQRVKEFGDFASADIAIDFWLTKELPQALKERLIIEKDVIKMMRM NEYPHSFAKADQMMRDTFQDYQTEELIRLKETGLVDWVYIDGEPYFQLRFLANLIKTNAA YVARLREAESNQLEILRKKELKENIEQMQKNGGRKVRTTIKATIQVKKEFERPGERVRVH LPLPKACQQQSEIEILATSPEATYIAAEDAPQRTLCFETILKENQTFTVEYCYVNRMVYQ QLEENNVDKMQPSFDLEEQLPHIRFTPYLRNLADEIVGDESNPLKKARLIYDFVTTKIHY SFMREYFTISNISEYAATNLKGDCGVQAILFITLCRIAGIPAKWQSGLYVSTHYTGCHDW AQFYIKPYGWLFADLSFGGGAYRDGDRQRWNHYFGNLDVFRMVANSEIQADFQPAKMQLR ADPIDNQRGEFEYENEGLPYACLIVSQERLSMEELPFD >gi|237663596|gb|GG668922.1| GENE 405 406246 - 407898 1571 550 aa, chain + ## HITS:1 COG:lin0200 KEGG:ns NR:ns ## COG: lin0200 COG4166 # Protein_GI_number: 16799277 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Listeria innocua # 2 550 3 549 549 552 52.0 1e-157 MKKLKMMGIMLFVSTVLVGCGTTAETKIDEKATEKTSVSKKVLNLMENSEIGSMDSIFTQ DEASINAQSNVFEGLYQLDEKDQLIPAAAKEMPEISEDGKRYTIKLREDGKWSNGDAVTA NDFVFAWRKLANPKNQANYFFLLEGTILNGTAITKEEKAPEELGVKALDDYTLEVTLEKP VPYFTSLLAFSPFFPQNEAFVKEKGQAYGTSSEMIVSNGPFLMKNWDQSAMSWDFVRNPY YYDKEKVKSETIHFEVLKETNTVYNLYESGELDVAVLTGDFAKQNRDNPDYEAIERSKVY SLRLNQKRNEKPSIFANENVRKALAYALDKKSLVDNILADGSKEIYGYIPEKFVYNPETN EDFRQEAGALVKTDAKKAKEYLDKAKAELNGDVAIELLSRDGDSDRKVAEFIQGQLQETL PGLTINVKTVPLNNAIELMRKGDYELSVGMWGPDYQDPMTFLESSVSGNRMNYSSPTFDQ LIEEATTKYANEPETRWQTLIKAEKVLVEEDAALIPLYQEARSQLVRPGVKGIQYHNFGA TSTYKYAYKE >gi|237663596|gb|GG668922.1| GENE 406 408208 - 409041 882 277 aa, chain + ## HITS:1 COG:BS_sacT KEGG:ns NR:ns ## COG: BS_sacT COG3711 # Protein_GI_number: 16080858 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 274 1 272 276 187 38.0 2e-47 MKIKKVLNQNAVLVLDEGQEKVAVGKGVGFNKTKNDVLSRQLVERMFVMEPEGLKKLQVL LSQIEDKYFLASEEIIQHAETVLGEKLNEHINIGLSDHIAFAAENIQNNIIVRNKLLSEI EILYSEEFAIAQWAVEYLTQTLEIPFSYDEAGYIAIHIHSARSGRTDNSKSIREVTIVSE IIHLIEQELAIDIHDDKNSLSYSRLVNHLRLFIHRFQQNQYAVLDEEILEVVKKKYAESY EISKKVQVLLMRNFHYQVPNEELGYLSIHIERLRMTK >gi|237663596|gb|GG668922.1| GENE 407 409078 - 411075 2574 665 aa, chain + ## HITS:1 COG:YPO2628_1 KEGG:ns NR:ns ## COG: YPO2628_1 COG1263 # Protein_GI_number: 16122841 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Yersinia pestis # 3 401 5 406 410 454 58.0 1e-127 MKAYMQRMGRSLMLPVAVLPAASLLVGIANWIVGTIGASPATTFLMNGGLAILNNLALLF AVGLALGMSKDKDGSAALAGLVAYLVPKTVLAPASIQAIKGFKDIAEVNPAFNSMDNNVF VGIVAGLVAAAMYNRFSGVKLPMALSFFSGKRLVPIMSAISMLAISAVLFFFWPVVYNGL VAFGKGISSLGFVGAGLYGFFNRLLIPTGLHHALNSVFWFDVAGINDIGNFLAGQQALDT GKAIVGQTGMYQAGFFPVMMFGLPAGAFAIYQCARPEKKKVTASLMLAAGFAAFFTGVTE PLEFSFMFVAWPLYVLHAVFTGISLAFAAFMHWTAGFAFSAGFVDFFLSLKNPVANHPMM LVVQGLVFAAIYYFGFRFAITKFNLMTPGREEGDGEETPDVAEGDNKFASLARRIYDGLG ADANVTSIDNCTTRLRLTVKDTGKVDQAKIKATGVPGVKVIDDTNIQVIVGTEVQFVADE MQRLYNHQAPATPVKETPVSQSVVEEKAPVSTKETELYSVANGKVIPISEVPDDVFSAKM MGDGFAVVPTDGEVSTPVAGKITSIFPTKHALGIQTDSGIEVLLHMGLDTVELQGGPFTL HVEEGQVVKQGDKIATIDLAALEQAGKKSDLIVVFTNQDIVAQYDLQKAGQTTSMNDVIG NVTVK >gi|237663596|gb|GG668922.1| GENE 408 411115 - 411210 57 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKFDKITCYSILGENVQSCEVTVCSQKSYFY >gi|237663596|gb|GG668922.1| GENE 409 411335 - 411919 755 194 aa, chain + ## HITS:1 COG:SPy1147 KEGG:ns NR:ns ## COG: SPy1147 COG0741 # Protein_GI_number: 15675124 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Streptococcus pyogenes M1 GAS # 2 194 12 197 199 156 45.0 2e-38 MLLLFVGLVAGLGYLGYKIHQNVETVMTFEKQVEAEVKKNKIPEYKTLALAIIYTESKGK SGDIMQSSESVYGQQEVIETPEESIAHGVKFLAEALAKAKEAGCDEWTGVQAYNYGLDYI QFVKERGGKHTTELAEEYSREVLSPLLGNDQNTKYRYYRWQALVYNGGYLYQNGGNMFYA EIVKMNRWFIEKLN >gi|237663596|gb|GG668922.1| GENE 410 412048 - 414384 2399 778 aa, chain + ## HITS:1 COG:SP1623 KEGG:ns NR:ns ## COG: SP1623 COG0474 # Protein_GI_number: 15901459 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pneumoniae TIGR4 # 10 770 8 778 778 673 48.0 0 MLNKVDLKKGLSTEEVAKQKELGLQNNYEENVAKSTKDIIFDNVMTLFNFLNFAIAVCLL FVGAYSNLAFLAIIIVNMSIGIFQEIHARNLVQKLSIVAKENVHVVRNGVQQEIDTKELV MEDIVIISAGEQVPSDMEVIDGKVEANEALLTGESDLIEKEIGDTLLSGSFIVSGQAYAR VIHVGAENYAVKITQEAKVHKPIQSELVNSIRKVSKFTSWVIIPLGIILFVEAFWLRDAG IKTSVVASSAALLGMLPKGLVLLISIALTTGVIKLAKKRILVQDMYSIETLAHVDTLCLD KTGTITEGKMKVQKAIILHDKYEELFPQIIGSYLSESTDNNITMQAIRDHYEVSNRFGAK EVLAFSSERKWGAIEFPEIGTVYLGAPERLVDDSRLPEAVFTAQENGYRVLMLAIAEQQP LNETKMPYLEPLAILEIDDPIRQNAKETLAYLKEEGIDLKVISGDNPVTVSNIARRAGLP GYESYIDLSTKTTEAEVREAVQQYTVFGRVSPQQKRTIVRELKDTEHVVAMTGDGVNDVL ALREADCSIAMAEGDGATRQISNLVLLDSDFTTLPDVLFEGRRVVNNVTRVSSVFFIKTI YSFILSIICALTAIAFPFIPIQVTLIDLAIEGYPAFFLSFEGDKRKVVGKFLPTALKNAS VNALLVVANIIAVYLIGQNQGFSSLDTTTLMYYLLVGISCMAVVRACLPLNPLRIFLVFS TIIGIYVAAMLFHNILEIGFLTSQTMGLFFIMMAINIVVRVTIGFVQMKRAGKTIKDL >gi|237663596|gb|GG668922.1| GENE 411 414701 - 416389 1600 562 aa, chain + ## HITS:1 COG:lin1492 KEGG:ns NR:ns ## COG: lin1492 COG0358 # Protein_GI_number: 16800560 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Listeria innocua # 4 554 3 553 626 441 43.0 1e-123 MAQRIPQEVIEEVRHRTNIVDIIGQYVQLKKSGKNYMGLCPFHEERSPSFSVAEDKQIFH CFGCGKGGTVFNFLQEIEGISFPESVKRVADLEHLSVDFDWSEPREVADTPENQQRRSLL QLHSKAAELYHHILVNTKIGEPALNYLLERGLTQELIETFQIGFAPQKRDFLSQVFKNEQ LDETLFEPSGLFVQRDNGTFLDRFYQRIMFPINDPQGNVIAFSGRLLKTADFPGDEMPKY LNSPETTLFNKRETLFNFDRARKEIRKENTVLLFEGFMDVIAAWQSGVKSGVASMGTSLT NEQIRRLERVAKEVVICYDGDNAGVQATNRAIQLLQENSHFDLSIVSIPEKLDPDEYVRK YGAEAFQNLANHGRETVFSFKMNYHRLTRNMNNEKEQLDYVNELLRELTNVQSPLERDRY LNQIAQEFQLSVHSLEEQFNQLKQEQRSVQRQERQQFYQDEMMPPPMEEPVFEENHVQNK LPLTQVQKAERSLLFRLMNEQGVRQTIQQLPDFSFAHDEYQELYFLLESYATLHQSFDIA DFINFLQDNQTKQLAIEIAYPS >gi|237663596|gb|GG668922.1| GENE 412 416894 - 418000 1482 368 aa, chain + ## HITS:1 COG:lin1491 KEGG:ns NR:ns ## COG: lin1491 COG0568 # Protein_GI_number: 16800559 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Listeria innocua # 10 368 17 374 374 494 79.0 1e-139 MEKETSKKYEAAVAAFIKENKPKGTVVYDDLANQLATPYTLDAEAMEKLIQKVEDAGISV VDENGDPSEHSLKKDEKEAEKAQAEDLSAPTGVKINDPVRMYLKEIGRVQLLTAAEEVEL ALKIEEGDQEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKG FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEIG AEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPAEHAAYELLKEQL EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS KQLKDFLE >gi|237663596|gb|GG668922.1| GENE 413 418152 - 420227 2376 691 aa, chain + ## HITS:1 COG:no KEGG:EF1523 NR:ns ## KEGG: EF1523 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 691 1 691 691 905 100.0 0 MTKKCPKCGNEFDAELTTCPTCGYSLTDTTVDKEEAETTSTNIDFETQENEEHEDQLNEN IEWSELKDMSLGHVMELFGESPEEESNDDKKEESTEDNLIVSDSEDVSGLEASLQEGASE ETHDSVEESIPATEETPTHSTEEKLATDEAVNLEETTEETTEETTTVEAETAEVSETVKS EEEALTEISGTEVISTTSEEEIFSQPPIEDQDVTPNETLQAYIQAHRADTEMSENPSEET AETQELENSGEAVLTQAETPTESISDSEEGLTSAASLEAPSDADATEGKVSDSGVIPPMN ETGNAQPAPAPKKPSKKVVFVALAVVLLAGGSAWAYHDQTQKAAAQEAAALTKKTDTLKD ELAAFYTTKEQVFIKPDMVTVSPEKLSKQVAEIKDSEEYSQLNKQIQTLKEKQQTIQQIN QLFEAPIVNGNELKPAILAADQPISVKKLTGNDPFDQLMNQAIDQANQQYNQLQKAKKAV EVIYKDGKTTNQLNRDTYQAAKAEVDKVTSDKLKKELVKQVTTADQALTKVEEEQKRIAE EQAAAEQAKQAEEQAKQAAAAKKEDAKKEETAKTEANGYTAPNSDGVYTSPLYAPDAADI ADSSNPAWTWAPGVKEKVLDTVIARGYVVPGGYSLEPAKIVNGEGYYNLYATNNQSKLLE GTTEKNVHMYLVTINAKTGWFKGNASRNAGQ >gi|237663596|gb|GG668922.1| GENE 414 420301 - 421182 525 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains [Anoxybacillus flavithermus WK1] # 14 284 10 281 285 206 41 1e-51 MRELLATTFTGIVVDENEQFYFVQKNGITFRLKKEEGTHAIGEAVEGFGYLNQKQEPALT TTIPTVRIGSYGFGTVTGTRRDLGVFVDVGLPDKDVVISLDELPTMRELWPKKEDRVMVT LKVDSKDRIWGELADEKVFKAMAKRGNAEMQNQNLTGHVYRLKLAGTYILTDDLYIGFIH PSERFQEPRLGEKVVGRVIGVRPDGVLNLSLKPRSHEVISDDALMILTFLERANDHQIPF TDKSSPDEIKQTFGISKAQFKRALGHLMKQKLIKQEDGKTILIGSLEQSKEKN >gi|237663596|gb|GG668922.1| GENE 415 421298 - 421747 481 149 aa, chain + ## HITS:1 COG:lin2070 KEGG:ns NR:ns ## COG: lin2070 COG0735 # Protein_GI_number: 16801136 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Listeria innocua # 9 148 7 146 152 201 70.0 3e-52 MDSTAALKKTKKQLHESGFKLTPQREATVLVLLENEKDHLSAEEIYFLVKQKSPEIGLAT VYRTLEILTDLKVVDKVSFNDGLARYDLRKEGAKHFHHHLLCLECGTIEEVEEDLLGEVE QIVESRYHFLVKDHRLTFHGICQSCQSKH >gi|237663596|gb|GG668922.1| GENE 416 422045 - 423055 1135 336 aa, chain - ## HITS:1 COG:ECs2022 KEGG:ns NR:ns ## COG: ECs2022 COG0057 # Protein_GI_number: 15831276 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 4 336 3 333 333 457 69.0 1e-128 MTVKVGINGFGRIGRLAFRRIKEVSDDIEVVAINDLTSPTMLAHLLQFDSTHGTYPGTVT ATENGIVVDGEETRVYAEPDASKIPWVKENGVDIVLECTGFYTSEEKAQAHLDAGVKRVV ISAPAGAMKTIVYNVNDDTLDANDKIISAGSCTTNCLAPMAYFLNNEFGIEVGTMTTVHA YTSTQMLLDGPVRGGNLRAARSAADNTIPHSTGAAKAIGLVIPELNGKLQGHAQRVPVVD GSLTELVSILKTKVTADQVNEAMKKHTIDNPSFGYDDREIVSGDIIGTTEGSIFDPTQTE VTTAGDFQLVKTVAWYDNEYGFTCQMIRLLEKFANL >gi|237663596|gb|GG668922.1| GENE 417 423343 - 424659 1786 438 aa, chain + ## HITS:1 COG:SP1079 KEGG:ns NR:ns ## COG: SP1079 COG0536 # Protein_GI_number: 15900948 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Streptococcus pneumoniae TIGR4 # 3 438 1 434 434 610 77.0 1e-174 MSMFLDQVTIDVKAGKGGDGMVAFRREKYVPDGGPAGGDGGRGGDVVLVVEEGLRTLMDF RFNRHFKATPGENGMSKGMHGRGSEDLLVKVPPGTTVRDAETGALIGDLIENGQTLVVAK GGRGGRGNIRFASPRNPAPEIAENGEPGQERKIELELKVLADVGLVGFPSVGKSTLLSVI SSARPKIGAYHFTTLVPNLGMVTTSDGRSFAAADLPGLIEGASQGVGLGTQFLRHIERTR VILHVIDMSGMEGRDPYEDYLAINKELASHNLRLMERPQIIVANKMDMPEAEENLAKFKE QLAKERTDEYADELPIFPISGVTRKGIEPLLNATADLLEVTPEFPLYEDEVVEEETVRYG FQPEGPEFTIDREPDASWVLSGEKLEKLFEMTNFDHDETVMRFARQLRGMGVDEALRARG AKDGDIVRIGNFEFEFVE >gi|237663596|gb|GG668922.1| GENE 418 424798 - 425100 326 100 aa, chain + ## HITS:1 COG:no KEGG:EF1528 NR:ns ## KEGG: EF1528 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 100 1 100 100 139 100.0 3e-32 MENNQAMVPKFSVKSAGFLFSMGLLCGVLLPSVLLWTFSLPFNIGAMIFLPVGIAFALAY SHYFIETKTGFCKRFIWLFLISLILLELISYLWLIKGVIF >gi|237663596|gb|GG668922.1| GENE 419 425127 - 426425 1547 432 aa, chain + ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 1 426 6 428 446 275 38.0 9e-74 MLDKLTVWIENHLAGPMAKIANQRHLRAVRDGIIATLPLIIVGSFFLIIAFPPLPESWGI TQFLTSNAATILLPYRMTMYIMALYATFGIGASLAKSYNLDQVSGGILATIAFLLTLVPV AIPEEASKAAGVSGFVLPMANLGGAGMFVGIVTSIIAVEIYRVTDKSKFKITMPDNVPPA VARSFESLTPTLIVMLLIGSITYYLGFDWHTFVGNLVGPLVQAADSLLSVLLLVFLTTFF WFFGIHGASIVGSLARPLWLQLLEENTTAKAAGEALPRIAAEPFYQWFIWIGGAGATIGL AILLAFRAKSEYGSKLGKAILAPSIFNINEPVIFGVPIVLNPILMIPFIFAPMVLATIAW FATKLGLVSEVVFTAPWTLPGPIGAFMATGGDWRAAVLNIVLILVAILIYYPFFVAYDKN ELAKEQGKQIEE >gi|237663596|gb|GG668922.1| GENE 420 426650 - 427189 610 179 aa, chain + ## HITS:1 COG:no KEGG:EF1531 NR:ns ## KEGG: EF1531 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 179 1 179 179 310 100.0 2e-83 MVRTKVYTKEKILNVAEKILVDKGFSNLTARNIADAMGISTQPIYLEFVNMDDLKRTLIK SLFHRMQLFYKADVGASDPVIALGLNFILFAQKHQKIYTALFMKAHGYEEELQQMLQTFF EERLLLDKKYVQMDKGKFVELFPKMVVIYLGLATAVTMKTIDLTKNQEIQLLSQLLIEE >gi|237663596|gb|GG668922.1| GENE 421 427332 - 427706 511 124 aa, chain + ## HITS:1 COG:SA0358 KEGG:ns NR:ns ## COG: SA0358 COG5294 # Protein_GI_number: 15926072 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 1 102 5 100 122 61 37.0 4e-10 MKFIKFLVVTAIVIGGGLFGAKFYAEKNSGELAGVLDQLNPLVKEGNVYVKTKKADSVNG YGIASYTQVAADEEGKTREITFTADHELKTDHYLKVSNKGAHINTYEEVKQDQVPEKALQ AIQK >gi|237663596|gb|GG668922.1| GENE 422 427888 - 428637 822 249 aa, chain - ## HITS:1 COG:lin2475 KEGG:ns NR:ns ## COG: lin2475 COG0652 # Protein_GI_number: 16801537 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Listeria innocua # 57 243 4 193 194 238 62.0 7e-63 MKHKKMLAVASVAAFTLLLAGCNTTNNKGTTATSDSVAKSSESKTKDSVDLNSLDLPQLD DKVAEDQDLVQMVTSMGNIEIKLFPKQAPKTVENFMKHAKDGYYDGLTFHRVINNFMIQG GDPSGDGTGGNSIWNKPFEDEFSNQLYNIRGALSMANAGPNTNGSQFFIVQNTDDQSDGL LYDDYPKAIIDAYKKGGYPSLDKKHTVFGQVTKGMDIVDKIAKVEVGANDKPKTDVKIEK INILQEAKK >gi|237663596|gb|GG668922.1| GENE 423 428819 - 429910 1245 363 aa, chain + ## HITS:1 COG:L176316 KEGG:ns NR:ns ## COG: L176316 COG3589 # Protein_GI_number: 15672155 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 363 1 363 364 574 76.0 1e-164 MGKLGISIYPERSTFEKDKAYLDLAHKYGFKRVFTSLLQINDDREKVLAEFKKVVDYANQ LGMEVMVDINPALFEQLGISYDDLSFFHDMGAYGIRLDLGFTGQEEANMTRNPYGIKIEI NMSSGTSYVDNIMAYSPNTENLLGSHNFYPHRYTGLGYEHFVYCSEKFRKYNLNTMAFVN SHDATFGPWPTQDGLCSLEDHRDLEIATQVKHLVLTGLIDDISVGNAYASEAELAAMAEA FHAPYPSIKVDTEPEITEDERIALFDNLHSYRGDRSDYVLRSTMTRVYYKDRPFPAHTTR DIVRGDVLIDNVGYGQYKGETQIALKEMKNDGRVNVVGRISDDERFLLEFLKPWSSFKLI ENK >gi|237663596|gb|GG668922.1| GENE 424 430105 - 431034 1103 309 aa, chain + ## HITS:1 COG:lin2180 KEGG:ns NR:ns ## COG: lin2180 COG1073 # Protein_GI_number: 16801245 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Listeria innocua # 7 306 11 317 319 289 47.0 5e-78 MNRWLKILIALIVVIAIGLIAAGLYFYNYAVVPGKKDFINENTPGSKVVQTPEGAWFKDD KNRQEWSITSEDGLRLKAIYLPADKKSNRTVIMAHGYMGSAETMSVFAKMYHDWGYNVLA PDARGHGKSQGDYIGFGWPDRKDYVQWIEKVLTENGQQEQITLYGVSMGAATVMMTSGEK LPDNVKAIVEDCGYSTVNQELQYQLKELFNLPSFPLVNVTSGITKLRAGYFFGEASAVKQ LQKNHLPMLFIHGENDTFVPFSMLDEVYNATQGPKEKYVVPGAEHAKAYNKNPEKYKETV AAFLDKYIK >gi|237663596|gb|GG668922.1| GENE 425 431203 - 432093 1026 296 aa, chain + ## HITS:1 COG:BS_ripX KEGG:ns NR:ns ## COG: BS_ripX COG4974 # Protein_GI_number: 16079408 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Bacillus subtilis # 1 296 1 296 296 317 53.0 2e-86 MEEQLVDYLHYLQIERGLSNNTRRSYERDLKKYVAFLQEQGLHSWDEVDRYMITEFLQSL HEEQQASASVIRMISSLRGFHQFLRQERLSEHNPMQHIDSPKKVQKLPSTLSVDEVTRLI ETPDTSKPLGMRNRAILEVMYATGLRVSELIEIKLGDLHLSIGLLQTIGKGDKERIIPLG DYAIQWIERYMNEARPQLIKNHPNETHLFVNHHGEPLSRQGIWKNLKQIVREAQIEKNIT PHTLRHSFATHLLENGADLRIVQELLGHADISTTQIYTHITKQRMADVYKEHFPRA >gi|237663596|gb|GG668922.1| GENE 426 432167 - 432952 874 261 aa, chain + ## HITS:1 COG:lin2065 KEGG:ns NR:ns ## COG: lin2065 COG1354 # Protein_GI_number: 16801131 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 242 1 239 249 194 48.0 2e-49 MQEINLKLDVFEGPLDLLLHLIQKLEIDIYDIPITAVTEQYMSYIHAMQTLELEVAGEYL VMAATLMAIKSQMLLPKQELEIIDDEDFFEEEDPREALVAQLLEYRKFKYAATVLHEKEE ERKLYYTKEPMDMDDYKEEDTTLPPNQINTIDLFLAFHAMLEKKKNRQPVETTVASDDVS IEEKISAISERMRQVQKGKAVSFDSFFDSYSKQEIVTTFMALLELMKTGAIYAEQENNYS EILLFNTETQQEDTTEVEETQ >gi|237663596|gb|GG668922.1| GENE 427 432949 - 433554 803 201 aa, chain + ## HITS:1 COG:SPy0367 KEGG:ns NR:ns ## COG: SPy0367 COG1386 # Protein_GI_number: 15674517 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Streptococcus pyogenes M1 GAS # 1 175 1 175 183 162 50.0 4e-40 MTLVSQIEAILFVVGEEGIGLEELAYLLEKSTAKTYEELTKLKEHYASDNKSALNILEVG NHFVLTTKKKYASLLKKYAQSPMSNALSQAALETLSIIAYKQPISRIEIDEIRGVQTSGS IQKLVARQLIEEKGRVDGPGRAILYGTTKYFMDYFGLKSLDELPDIQQMEDELEEELPMD LFFDRYQETNPMSETTEGEEA >gi|237663596|gb|GG668922.1| GENE 428 433558 - 434274 955 238 aa, chain + ## HITS:1 COG:SP1874 KEGG:ns NR:ns ## COG: SP1874 COG1187 # Protein_GI_number: 15901702 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Streptococcus pneumoniae TIGR4 # 3 237 2 236 240 285 63.0 7e-77 MERLQKAIAHAGVTSRRKAEELIVKGRVKVNGQVVKELGTQVSKQDTVEVDGVPIYQEEY GYYLFYKPRGVISAVSDDKGRKVVTDYFTDVTERIYPVGRLDYDTSGLLLLTNDGSFSQK LTHPKHEVDKVYVAKIKGVPTKRDLLPLAKGIRIDGKRTAPANFQILSADIKTGSSVVEL TIHEGRNHQVKKMFQAVGFPVQKLKRERYGELTLQGLRPGQYRDLTKKEISQLLNQAK >gi|237663596|gb|GG668922.1| GENE 429 434617 - 435282 533 221 aa, chain + ## HITS:1 COG:lin2059 KEGG:ns NR:ns ## COG: lin2059 COG3601 # Protein_GI_number: 16801125 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 22 216 3 192 203 114 34.0 2e-25 MTKKRIKKFVEDGSLIGGFQMNNKVQKMVSIAMLAAIGTVLQFVAFPIMPAFSFLKIDFS DIPILLGMFLYGPLAGVITAFVRSLLHLFLTGLAPQNMVGDFASFLASSIFTLPIFYFFG KKKNIRTNRIVGLVSGILALTIFMSIANYFVITPIYLQLYGVTTQQFLGTSLASYVAIGI VPFNLIKGLLVSGVFLVLHAKLLPWLSKKQHTIQKKTPLTK >gi|237663596|gb|GG668922.1| GENE 430 435463 - 436869 1178 468 aa, chain + ## HITS:1 COG:BS_yvbJ KEGG:ns NR:ns ## COG: BS_yvbJ COG4640 # Protein_GI_number: 16080441 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 4 432 4 434 605 105 20.0 3e-22 MKKCKNCRHVNRDTESFCEECGAPLMNESMHQEENQAQPSMNKGNESTPLRSKRSWIWAF LFVFIVLGAGSYFLGTHYFSKEQQISYFIEAIENGDAQELSKKMRTNESEFQVNPQSIKP LITYYQKNPTELKKLEKALLKDKKLHGLTIRETSQTAFFFHRYQFILTPVSVQLTTNQRG VTLAMNGREVGTSDSTTYQKELGPLAPGQYTFTATVKDSTGEPVITEEYRLLEEENYISS IPLDFKRMNFVVESNLPDADIYINDRKVGTLTNGSKTIGPLFWSKGMTIQLKKTINGEEI QTSKETIGENDFVEALSDNPTLQLNFPLASDYDARKALETFYQAFAKQVKSHTDSTEFAK KYLVGGENNPQFPSFIEALERLREKKSTDGSPDFEVTINTLQLDGKENYHVNYYLEAKNS KAKENGLRYEWINGLNDQIHLVKEPLKEGQLQFVSIDEQTLAWLEKIL >gi|237663596|gb|GG668922.1| GENE 431 436892 - 437110 242 72 aa, chain - ## HITS:1 COG:L176167 KEGG:ns NR:ns ## COG: L176167 COG1141 # Protein_GI_number: 15673687 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Lactococcus lactis # 1 70 1 67 67 66 42.0 1e-11 MQSRLVPEKCIACGLCQVYAPNIFDYDDHGIVLFKDEPHARQQFIPENERENVLKAYRKC PTRAIEISKNEC >gi|237663596|gb|GG668922.1| GENE 432 437146 - 438180 713 344 aa, chain + ## HITS:1 COG:BH1606 KEGG:ns NR:ns ## COG: BH1606 COG4955 # Protein_GI_number: 15614169 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 21 337 26 347 359 84 25.0 2e-16 MEATFILALLSHGYKVRASTLYHLLKGKRTSSVLIYGFLYDCLRFIGWWPTISEQAYFQF LEKLSKAKQIQYHEETNEIQLTKEGQLFLKEHHFSLLDYPAIDLYRFGRSDRESWQLIQF AVQVTSYLSFEEKQYIPLLSTPIPQLYLKRWLQQDKKEQRVQSIKEELLRGFELLPEAES DYLVAQLSGYQQTGKVPQQLTSHKTALEQRLWHTQAVHHLLQLIMYGGNYPALQTLVWPY LEKNLNQSMQETQRLLTEGKTLQEIAEQRKIKPSTIHDHLLELAIQGQLQASVYLEKEAM LQNLAQTEQDPRLWVYRDWRAQEATLSYLDFRLYQIQQIWQEKE >gi|237663596|gb|GG668922.1| GENE 433 438187 - 439623 1283 478 aa, chain + ## HITS:1 COG:lin2056 KEGG:ns NR:ns ## COG: lin2056 COG0514 # Protein_GI_number: 16801122 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Listeria innocua # 1 468 1 460 467 345 42.0 1e-94 MTLEQELFTQFGYAAFKPGQKEVITNLLDGMNTLAVLPTGTGKSLCYQFVGQKLEGLTVI VSPLLSLMEDQMRQLQRQGIKGAVALNSTLQYSEKRYILAKMFQYDYLFLSPEMLLQQEV LSVLQRQKIALFVVDEAHCVYQWGVDFRPEYSKLDLVQKQLDFPLTLALTATATPVVQHA IIKQLFSHGSYQEVLSSVNRKNIGLFVKETSEKEEVLLDYLSKTAGKIIIYCATRNKTEQ ISQLIQAKTSFKVAYYHGGLEASERSRLQEQFIDNQIDILCATNAFGMGIDKPDVRGVIH FDLPDSLENYLQEIGRAGRDGQKSWALLLYKKGDEFIHRFFLEETRANRATLKSLIEGEE QAGLLENATELQQKWVQGYLAKDYSFEELEHRLEEKEKDRQAQLRGMLTYIETTTCRRTL IQTYFQEPIVKQSPETCCDNCALFFDIYQDSIVKSNKTSNQNEEGWRSKFLKLFKERD >gi|237663596|gb|GG668922.1| GENE 434 439699 - 440325 753 208 aa, chain + ## HITS:1 COG:no KEGG:EF1546 NR:ns ## KEGG: EF1546 # Name: not_defined # Def: LysM domain-containing protein # Organism: E.faecalis # Pathway: not_defined # 1 208 1 208 208 169 100.0 6e-41 MSKKDKKKNQAREPWEQSIYEPDQNGGGSRLAKRQQQRGNSLFLTVLVILLLLIIAIPIG TFLWMMQDKKPNESASKNSQPSSSLVQSSSKEKKKESTSKSVESSEPASSQPAENTTPSS SDAAAQQQQDQQAQQQQQQQQEQQQQQEAQNQQQQQAQNQQPVYDTVQSGEGARQVAERN GMTLEQILALNPGIDTSVFYPGQPLRIK >gi|237663596|gb|GG668922.1| GENE 435 440562 - 441242 804 226 aa, chain + ## HITS:1 COG:SP1603 KEGG:ns NR:ns ## COG: SP1603 COG0283 # Protein_GI_number: 15901443 # Func_class: F Nucleotide transport and metabolism # Function: Cytidylate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 215 1 216 223 240 63.0 1e-63 MGKISIAIDGPASSGKSTVAKILAKQLNYVYCDTGAMYRAITYLALQNQIDIQAEEPLVA LCVNHTISFQQAENGQRVFIDGHEVTEAIRQPDVTNAVSAVSKHAKVREEMVALQQKIGQ AGGVVMDGRDIGTAVLPKAEVKIFLVASVEERAERRFKENQEKGIETDFETLKAEIERRD YLDSTREVSPLVQASDAVKIDTTGLTIEEVVAAIQNVIKQKGFELF >gi|237663596|gb|GG668922.1| GENE 436 441356 - 442567 2025 403 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29376111|ref|NP_815265.1| 30S ribosomal protein S1 [Enterococcus faecalis V583] # 1 403 1 403 403 784 100 0.0 MTDFEDKQVANNETMEDAMNSVQEVSVGDIVKGEVLAIEDKQVVVGIEGAGVEGVVPAKE LSTLPVEDVHELVKVGDVLDLVVITSIGKDKENGSYLLSKRRLDAKKVWEEIEQDFQAGK VIEAPVTNVVKGGLVVDVGVRGFVPASMVEDHFVADFSEYKGQTLAFKIIEIEPSENRLI LSHKAVVEAEKESKKEELLSSLHDGDVVEGKVARLTDFGAFIDLGGVDGLVHVSEIAHQH VGKPSDALTVGEDVQVKILSINPEEGRISLSIKETLPGPWTDIETKAAAGTVLDGTVKRL TSFGAFVEVFPGVEGLVHISQISHKHIATPHEVLHEGDQVQVKVLEVNPEEHRIALSIKA LEPKPESQEEPKEEQEYELPEENTGFTMGDILGDALSDAKEEE >gi|237663596|gb|GG668922.1| GENE 437 442741 - 444051 1725 436 aa, chain + ## HITS:1 COG:SP1709 KEGG:ns NR:ns ## COG: SP1709 COG1160 # Protein_GI_number: 15901543 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Streptococcus pneumoniae TIGR4 # 1 436 1 436 436 689 78.0 0 MANPTIAIVGRPNVGKSTIFNRIAGVRISIVEDTPGVTRDRIYTTGEWLGREFSIIDTGG IDLGDEPFMDQIKHQAEIAIDEADVIIFVASGREGITDADELVAKILYRSNKPVILAVNK VDNPEMRNDIYEFYALGLGDPFPVSGSHGLGIGDVLDEAVKHFPNTSEEEDEDTIKFSLI GRPNVGKSSLINAILGEDRVIVSDIEGTTRDAIDTYFESEEGQKFLMIDTAGMRKRGKVY ESTEKYSVMRAMRAIERSDIVLMVLNAEEGIREQDKRVAGYAHEAGRGIIIVVNKWDTVK KDTNTMRDFEAEIRDEFQYLDYAPIIFVSALTKQRLNKLPELIETVSMNQNLRIPSALLN DVVMDAVAINPTPTDKGKRLKIFYATQVAVKPPTFVIFVNEEELMHFSYARFLENQIRKA FTFEGTPIKIIPRRRK >gi|237663596|gb|GG668922.1| GENE 438 444299 - 444574 179 91 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148826039|ref|YP_001290792.1| 50S ribosomal protein L35 [Haemophilus influenzae PittEE] # 4 91 6 93 96 73 38 2e-11 MANKAELIENVASSTGLTKKDATAAVDAVFSTIQETLAKGEKVQLIGFGNFEVRERAARK GRNPQTGQEIQIAASKVPAFKPGKALKDAVK >gi|237663596|gb|GG668922.1| GENE 439 444881 - 445921 850 346 aa, chain + ## HITS:1 COG:no KEGG:EF1552 NR:ns ## KEGG: EF1552 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 346 1 346 346 689 100.0 0 MKYNYSRGENKVAIIYGETFASVLKKRPVTTESIVVLANQRYYDLFSEKINYAFGEQLGL NWYICRNDVHCNDLSELESVLRFLADWPENQDVLLIGLGNEGVLQLTAFLHQVSKCSSKC WLMPVSVQALRQGLLPSVTIQQAQHATMHIENHSEEILFDSTLTNKKGAAPLIDLLVFIR ASLVCDYAYLQMLYQTYPDKKRLNQTSFNGILDELLSFYEQAGEKVDQFGRVFEAAFATT ENGHLLSGPMKRLLGLLLQVLWSQQVNHFDFQFKNFIIWFIRLGFPVAFPKEILSADYAE QVLLHTETLGPPMVLEKIGQLGAALKPTPDQLLTTIERYQEILKEI >gi|237663596|gb|GG668922.1| GENE 440 445931 - 447187 1743 418 aa, chain + ## HITS:1 COG:SPy1012 KEGG:ns NR:ns ## COG: SPy1012 COG0457 # Protein_GI_number: 15675015 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Streptococcus pyogenes M1 GAS # 1 412 1 406 415 239 40.0 7e-63 MSYSEKMVQALQAENLAEAQLMFEEALKKDDENTLADLGETLLSLGFLEEAKQIFQQLLE QFPDADGLNIPLAEIAIENNEIDDAFIYLEKIPETSDSYVQSLLVTADLYQVLGIPEVSE AKLKEAANLMPEEPLIQFALGELYFTNGQFVEAITRYQSIVESGTAQISAISLNERLGSS YSMLGDFEEAVPYLEAAVKEEQTDDRLFQLAFTYLQLHENQKAIALFQQLKTLNPHYQSL YLYLAEALQEEEQLEEAKAVIEEGIAENPFQVELYQFASENAYRLHDIAGAENWLLKALE LGEKTDESRLTLSNLYITEERFEEVITILNDLEETDHPYAEWNLAKAYNELEDFAVAKVH YEQAAQELSHEPEFLKEYALFLREEGELEKAKHLLYHYLEHEPGDVDMQSVLADMEER >gi|237663596|gb|GG668922.1| GENE 441 447197 - 447736 570 179 aa, chain + ## HITS:1 COG:lin2035 KEGG:ns NR:ns ## COG: lin2035 COG5582 # Protein_GI_number: 16801101 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 3 179 5 179 181 120 39.0 2e-27 MFVSLSEKKKFLTWLVNTAPFGRREVLWILNYLLTHDAILNNVHFVENVEKTDRGIRVVA DGLGKEPLLLFIQAQEFTDPEQIFHEIRMNWRKALYLECVFPEAWQTSQYLSVLEDNPFA PWNEQVDQEVARAIDQYFKQEEQTQRMALLKAQIDDALETGNKEAFLELSDELNRLKQQ >gi|237663596|gb|GG668922.1| GENE 442 447967 - 448851 958 294 aa, chain - ## HITS:1 COG:SPy2153 KEGG:ns NR:ns ## COG: SPy2153 COG1284 # Protein_GI_number: 15675895 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 14 279 16 281 290 282 52.0 4e-76 MEEQRFYFKDVLFIVLGSCIYAFGLVTFNIANDLAEGGVTGITLILRALFHFNPAYTTLL INIPLLLIGGKILGKRSLYYTLIGTVSLSVFLWFWQKFPVEINLDHDLLIAALLAGLAAG FGSGLVYRVGGTTGGTDVIARIFEKYFGISMGRSLLLFDVAVLLLSLTYIDVKRMMYTLI VSFVFSRVVDSVLDGAYAAKGILIVSNHSEEIGQSLMASLERGVTYLNGEGAYSQVEKRV LYTVVSPREIMEVKRIANEIDEKAFVSIINVHEAIGEGFTYAKPSKQRRFKLKQ >gi|237663596|gb|GG668922.1| GENE 443 448975 - 449325 458 116 aa, chain + ## HITS:1 COG:SA1292 KEGG:ns NR:ns ## COG: SA1292 COG1694 # Protein_GI_number: 15927040 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Staphylococcus aureus N315 # 7 110 2 105 105 121 65.0 3e-28 MSESEQRSLQSMQTEVDDYIQQFKTGYFSPLGQMARLTEEVGELAREVNHYYGEKQKKAD EKPKTVSEELGDVFFVLISMANSLEIDLTEVFEENMAKFNKRDRYRFERKDGKTHD >gi|237663596|gb|GG668922.1| GENE 444 449318 - 450097 949 259 aa, chain + ## HITS:1 COG:SP1555 KEGG:ns NR:ns ## COG: SP1555 COG0289 # Protein_GI_number: 15901398 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Streptococcus pneumoniae TIGR4 # 2 259 3 255 255 327 63.0 1e-89 MIKIIVAGFKGRMGSTATQMVLETADFELVGVYDPHEAQETVSFNDETAIPVFQRLEEVL AVKPDVWIDFTVPEAAYPNTRFALEHGMAPVVGTTGFTEEQINELTNLSREKAIGGLIAP NFAIGAVLMMQFAQKAAQYFPDVEIIELHHDNKLDAPSGTAIKTAEMIQEVRPAKKQGNP QEVESIPGARGADFEGLRIHSVRLPGLVAHQQVQFGSVGEGLTIRHDSYDRRSFMTGVAL ACRQVVQRTELLYGLEQML >gi|237663596|gb|GG668922.1| GENE 445 450040 - 451314 1227 424 aa, chain + ## HITS:1 COG:SP1554 KEGG:ns NR:ns ## COG: SP1554 COG0617 # Protein_GI_number: 15901397 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Streptococcus pneumoniae TIGR4 # 24 418 1 394 394 351 49.0 1e-96 MSASGTENRTTLRIGTDAMKLTTIPNEFKEAAPVIREINAQGFEAYFVGGSVRDALLNKP IHDVDIATSAYPEEIKQIFKRTVDVGIEHGTVLVLMEDQQYEVTTFRTESTYQDFRRPDE VTFVRSLKEDLKRRDFTINALALDSTGEIIDLFDGIEDLTNQTIRAVGNPHERFHEDALR MMRGLRFASQLDFKIEEKTLAAIAEFHPLLEKISVERITIEFVKMLLGVNRQGGLAPFIE TECYQYCPKLREQGAGLFRLMDLPARQIETEAEAWTLLIQSLNLPEAEIRSFLKAWKLSN QLIQNVSQLVRGLRFRLSNDWQPMMLYELGEESAVLVERLLYYYQQESQVQVTKELVKAL PIHQRHELAITGKDLLAVLEETPGKWLGELIAEIEQHVVEGSLENKQEVLLSFAKKQRSK GEKA >gi|237663596|gb|GG668922.1| GENE 446 451314 - 451688 463 124 aa, chain + ## HITS:1 COG:SPy1339 KEGG:ns NR:ns ## COG: SPy1339 COG5496 # Protein_GI_number: 15675277 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Streptococcus pyogenes M1 GAS # 5 123 3 121 121 70 30.0 1e-12 MPTEMFTKEFLVKESQTAKMLGSGDLEVLGTPALAAMIEQTAKEAVKDQLSVGETTVGTV LELRHLFPSAVGATIVVTMTSIEQTAHKIRYEFVAYEGERQIAKGSHQRAVVEIDSFLKR ITKD >gi|237663596|gb|GG668922.1| GENE 447 451778 - 452233 606 151 aa, chain + ## HITS:1 COG:no KEGG:EF1560 NR:ns ## KEGG: EF1560 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 151 1 151 151 301 100.0 7e-81 MAREMTGLKFYFRNGETWTIDRRFIGDLWIKHITTSFGRIHGSEFVEIHPCEGFKIEIFQ EGDHVQTHDINLGGLELGMFSRALKYEDIERMEILYKNGTPDLVYFPYKDKTDEGLDNIY QSTKVSEKTKNLYIVIDPTQTVDDVYAEELK >gi|237663596|gb|GG668922.1| GENE 448 452722 - 453588 837 288 aa, chain + ## HITS:1 COG:lin0493 KEGG:ns NR:ns ## COG: lin0493 COG0169 # Protein_GI_number: 16799568 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Listeria innocua # 2 282 7 287 291 277 48.0 2e-74 MKEITGATRLAGLFAKPSQHSISPLIHNTAFQNLGVDARYLAFDVGQETLPQAIEAIRTF HMLGANLSMPNKVAAVSYMDELSPTAQLVGAINTIVNKDGKLYGDSTDGTGFMWSLKEKK VDVFQNKMTILGTGGAALSIIAQAALDGVKEIAVYNRKSAGFNDSQKKLANFTERTNCVI HLNDLADTEKLAKDVAESVLLVNATSVGMHPHAHSSPIENYAMIQPKLFVYDAIYNPRET QLLKEARLRGAETSNGLDMLLYQGAAAFEQWTGQKMPVSVVKRKIENR >gi|237663596|gb|GG668922.1| GENE 449 453625 - 453783 347 52 aa, chain + ## HITS:1 COG:no KEGG:EF1562 NR:ns ## KEGG: EF1562 # Name: not_defined # Def: 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54) # Organism: E.faecalis # Pathway: Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:efa00400]; Metabolic pathways [PATH:efa01100]; Biosynthesis of secondary metabolites [PATH:efa01110] # 1 51 1 51 341 91 100.0 9e-18 MIVIMKENATEKQMKQVIDLVTGAGLTTQTSQDNGKTVIGLIGDTEKLVEAS >gi|237663596|gb|GG668922.1| GENE 450 453919 - 454662 947 247 aa, chain + ## HITS:1 COG:PAB0297 KEGG:ns NR:ns ## COG: PAB0297 COG2876 # Protein_GI_number: 14520663 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Pyrococcus abyssi # 2 232 28 258 265 278 59.0 6e-75 MTMMAGPCSIESLDQIRECARIAKAGGATILRGGAFKPRTSPYAFQGLEEEGLKYIRQAA DELDMQVITEVMDEANLELVAKYSDILQIGARNMQNFKLLQAVGKTGKPIGLKRGIAGTI DEWLNAAEYIAAQGNFNVIFIERGIRTYETATRNTLDLSAVPLIKKLSHFPIIVDPSHGV GIWDLVPPMARAGVASGADGLIVEIHPDPANAWSDGPQSLNEKTYLRMMKEVHIIEKAMK EINALED >gi|237663596|gb|GG668922.1| GENE 451 454685 - 455761 1216 358 aa, chain + ## HITS:1 COG:L0060 KEGG:ns NR:ns ## COG: L0060 COG0337 # Protein_GI_number: 15673738 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Lactococcus lactis # 1 354 1 356 356 399 56.0 1e-111 MKLTVTLPTHSYDLTIETGALDKIGTWVRSLWQPQRVAIITDETVNKLYGAAVEKELQAA GFETSLIAVAAGEQSKSLEIAQLLYDFLAEQQLTRSDGLIALGGGVVGDLAGFVASTYMR GIHFLQVPTTLLAQVDSSIGGKTAVNTKKAKNLVGTFAQPDGVLIDPNTLKTLEPRRVRE GIAEIVKSAAIADVELWHRLSSLENEQDLVAHAEEIITACCKIKRDVVEEDELDLGLRLI LNFGHTIGHALENTAGYGVIAHGEGVSLGMIQITQVAEQQGLSPLGTTQELVTMLEKFHL PVTTDRWSEERLYQAITHDKKTRGGQIKIIVLEKIGQAKIVSLPTEEIRAFLNREGGI >gi|237663596|gb|GG668922.1| GENE 452 455763 - 456929 1426 388 aa, chain + ## HITS:1 COG:SPy0810 KEGG:ns NR:ns ## COG: SPy0810 COG0082 # Protein_GI_number: 15674852 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 388 1 388 388 497 62.0 1e-140 MRFITAGESHGPELTAIIEGLPAGLPLSSEEINRELARRQGGYGRGGRMKIEKDQVRITS GIRHGKTLGSPVTLIVENKDWKNWTSVMSVEPVPEKQKKIRRVSKPRPGHADLVGGMKYQ HDDLRNVLERSSARETTMRVAIGAVAKKLLAELDIQVAGHVAVLGGIEATIPENLTIREI QERSEQSAVRVLDPSVEEKMKELIDQTKKNGDTIGGVVEVLVGGVPAGLGSYVQWDRKLD AKIAQAVVSINAFKGAEFGIGFEMAQRPGSQVMDEIVWDESTGYTRTSNNLGGFEGGMTN GMPIIVRGVMKPIPTLYKPLQSVNIDTKEPYKASVERSDSTAVPAASVVCEAVVATEVAK AMLEKFDSDSFEQMKEAVKRYRLYTQNF >gi|237663596|gb|GG668922.1| GENE 453 456963 - 458057 1020 364 aa, chain + ## HITS:1 COG:lin2038 KEGG:ns NR:ns ## COG: lin2038 COG0287 # Protein_GI_number: 16801104 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Listeria innocua # 1 362 1 365 367 377 52.0 1e-104 MKKRILIVGLGLIGSSLALCIKKGHPNSEIIGFDNQAEATEFAKKTGLIDEIAESLTSGA RRAEIIFLCSPVKATLVQLEELNQLSLETALITDVGSTKVEINQLATKLNMKNFIGGHPM AGSHKSGVTAADERLFENAYYIFTDDHGEKNKQIQELQTLLKGTHAKFITMPAQEHDEIT GALSHLPHIVAAALVNESQQLNTTYPRAQQLAAGGFRDITRIASSDATMWTDILLSNRLV LLDLLENWQKEMTTVCQWLTEKNAPAIRNFFDKAKETRAQLPIHKEGAIPAFYDLFVDVP DQPGIIAEITQILGEADLSLTNIKILETREEIYGILQLSFKNQPDCQAAKQILSKKTNYT CYEK >gi|237663596|gb|GG668922.1| GENE 454 458070 - 459350 1344 426 aa, chain + ## HITS:1 COG:SP1371 KEGG:ns NR:ns ## COG: SP1371 COG0128 # Protein_GI_number: 15901225 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 424 1 424 427 525 62.0 1e-149 MQLRTNVKHLQGTLMVPSDKSISHRSIMFGAISSGKTTITNFLRGEDCLSTLAAFRSLGV NIEDDGTTITVEGRGFAGLKKAKNTIDVGNSGTTIRLMLGILAGCPFETRLAGDASIAKR PMNRVMLPLNQMGAECQGVQQTEFPPISIRGTQNLQPIDYTMPVASAQVKSAILFAALQA EGTSVVVEKEKTRDHTEEMIRQFGGTLEVDGKKIMLTGPQQLTGQNVVVPGDISSAAFFL VAGLVVPDSEILLKNVGLNQTRTGILDVIKNMGGSVTILNEDEANHSGDLLVKTSQLTAT EIGGAIIPRLIDELPIIALLATQATGTTIIRDAEELKVKETNRIDAVAKELTILGADITP TDDGLIIHGPTSLHGGRVTSYGDHRIGMMLQIAALLVKEGTVELDKAEAVSVSYPAFFDD LERLSC >gi|237663596|gb|GG668922.1| GENE 455 459370 - 459876 577 168 aa, chain + ## HITS:1 COG:SP1370 KEGG:ns NR:ns ## COG: SP1370 COG0703 # Protein_GI_number: 15901224 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Streptococcus pneumoniae TIGR4 # 5 162 4 157 158 131 44.0 6e-31 MESIVLIGFMGAGKTTIGQSLANKLKMPHLDLDTALIEKIGRSIPDYFEKYGEAAFREQE TQLLKELSKNTAVLSTGGGIVVGPENRSLLKSFQQVIYLHATPEELLKRITEDTENQRPL AIERSSKEIITLFESRKNFYEECAKMTIDTTNRSPEEIINEILQQLKE >gi|237663596|gb|GG668922.1| GENE 456 459884 - 460732 816 282 aa, chain + ## HITS:1 COG:SP1369 KEGG:ns NR:ns ## COG: SP1369 COG0077 # Protein_GI_number: 15901223 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Streptococcus pneumoniae TIGR4 # 1 280 1 275 282 276 51.0 3e-74 MKVGYLGPIGSFTYSATLAAFPEATLMPYASIPACLKAIEQQEVAWSIIPIENTIEGTVN ASIDYLYHQAQLPVQAELVLPIQQQLMVAKENQAIWQQSQKILSHPQALAQSQMFLEKNF PEAILEATPSTAYAAKYIAEHPELPFAAIAPKLSAEMYDLTIVEKNIQDLSVNQTRFWVL GSENLAISFPLSEKKITLAITMPSNVPGSLHKVLSVFSWRGINLSKIESRPLKTKLGEYF FLMDLVKDQPEKLIEAALTELELIGAEIKILGDYPIYVLSTL >gi|237663596|gb|GG668922.1| GENE 457 460876 - 462048 979 390 aa, chain + ## HITS:1 COG:lin0463 KEGG:ns NR:ns ## COG: lin0463 COG1316 # Protein_GI_number: 16799539 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 88 388 6 308 309 260 45.0 3e-69 MSRVDRYKHIHEKSRPAEHKKTFNPRKSMGEHREEEPEELAESLQEPVYEDSYTEDSRRS ERRHQTDSGGGNGSDQPPRGKKDKKPKKKRKKSKTKRFFKWLVILLILLFAYSTVMFLKG KSAAEHDDSLPQEKVETFNGVKSSNGAKNILILGSDTRGEDAGRADTIMVLQLNGPSKKP KLISFMRDTFVDIPGVGPNKINAAYAYGGAELVRETLKQNFNLDTKYYAKVDFQSFEKIV DSMFPKGVKIDAEKSLNLDGVDIEKGQQVMDGHVLLQYARFRMDEEGDFGRVRRQQQVMS AVMSQMKNPMTLLRTPESLGKLVGYMSTDVPVSFMLTNGPSLLIKGKAGVESLSVPVPDS WNFGESSYAGSILEVDEQKNADAIEKFLNE >gi|237663596|gb|GG668922.1| GENE 458 462124 - 462972 916 282 aa, chain + ## HITS:1 COG:lin2658 KEGG:ns NR:ns ## COG: lin2658 COG1307 # Protein_GI_number: 16801719 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 2 280 4 281 283 239 45.0 5e-63 MKIAIVTDSTAYLPERIKDHPNLFVIPIPVILDGKIYNEGIDIEADEYYALLNNSKEFPT TSQPALGEVLELYKSIAEQGYDTIISIHLSSGISGFVHTLHGLTDEIPGVALYPYDSKIT SMPMGHMVEAALDLTEEKASLEEIFAKLDLIRDNTYAYLIVEDLNNLVRGGRLTNGAALI AGLLKIKPILTFEDGKIVLFEKIRSTKKAFARAEKIIGERNAGIEAPVKLYVIHANNRIV AEKEQAKLQKLYPNAEIEIGHFGPVIGTHLGEKAIGLAISAQ >gi|237663596|gb|GG668922.1| GENE 459 463166 - 463360 237 64 aa, chain + ## HITS:1 COG:no KEGG:EF1571 NR:ns ## KEGG: EF1571 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 64 1 64 64 72 100.0 7e-12 MKRNIALLQSEKMKKVQALANYYQESIDLPPGKNREAVIKKINESKKEIKEINDILTDIQ KKKK >gi|237663596|gb|GG668922.1| GENE 460 463372 - 463848 445 158 aa, chain + ## HITS:1 COG:no KEGG:EF1572 NR:ns ## KEGG: EF1572 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 158 1 158 158 287 100.0 1e-76 MIIDGFTLLLFLFVVVMYGYFYFVRKSIVIPAAKHPTTKYLVAFFSLMILANAFSAGDKI EMIRSVLYILIIFSFLYDARGFAEDCIITHPFDNRGTAFKDIEKIVLVQKPNGIRLGYLK KGRRGVVLRFSAPLEEMVLFLSTRMNEEAEIDIIVNED >gi|237663596|gb|GG668922.1| GENE 461 463992 - 464258 289 88 aa, chain + ## HITS:1 COG:no KEGG:EF1573 NR:ns ## KEGG: EF1573 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 88 23 110 110 97 98.0 2e-19 MSEEFEKCVADLKKKYQAIPEEKRQHFAERMQKKNFLRYKKIELIKGELLRLEARRAQLE LCERSSELEEVEKKIILKKKKLLKCFDR >gi|237663596|gb|GG668922.1| GENE 462 464294 - 466348 2229 684 aa, chain + ## HITS:1 COG:L187315 KEGG:ns NR:ns ## COG: L187315 COG0025 # Protein_GI_number: 15672365 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Lactococcus lactis # 1 666 2 662 680 437 39.0 1e-122 MEFTFLIIVFALSITFSNIFNRIVPVIPLPIVQIIVGVLIGLTKMGQEIEFEPEVFLVMI IAPLLFREGELINLKAMMKNFGMILFLAFFGVLITLVGVGWTLHMILPTLPLAACFAFGA ALGPTDAVAVGSLSGRIDIPERSMNILSGEGLINDASGVTAFQFALAALLTGSFSPVEAA GTLVISSIGGAVVGIVLVLLKQQIVHLLETAVAKDVTGYLLIELLLPFIAYLISELIGVS GIIAAVIAGIMQASSLKKVSLFEAELSNVGESIWSMIEFTLNALVFLFLGIELSQVFSPI WIDQQYSNWFLLLVVLIISAVVFLIRFLAIFSVYTLQHGLKKVKNAMNEMLILTFGGVKG TVSLATIFILPTAINGEHFKERPLLLFITACVILVTLIGGILVLPFLTDSETEVENEESV EIDLLRDVIDVLKQQNEENPRGEMNAVIENYQDRLKELYTEQLSAERKQEVQELRTLIVS IERDGLEESLKQGEISVRSYRMYQRLITRMQRSIAKQLLSIVGFWLLFARQIISILLHPK LFFNRGEASEEEKELRNEELENIRQVFLRNSQVILKSLDNLRGVYDDDLIDFFIDGRLDL AHKFEKGEFIDSYIVHTETDYVKDLLLGFQEERRMIDHYEQSERISIIEANELRKNVNLL ESYSISGEVNNVPLKRFVKNFNKE >gi|237663596|gb|GG668922.1| GENE 463 466400 - 466495 85 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFWLNLLLLILSPTLPTPSILVLLIVSKIGL >gi|237663596|gb|GG668922.1| GENE 464 466459 - 468348 2154 629 aa, chain + ## HITS:1 COG:lin1989 KEGG:ns NR:ns ## COG: lin1989 COG0488 # Protein_GI_number: 16801055 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Listeria innocua # 1 629 1 630 630 637 54.0 0 MKELKVTDLTKTYGEKTLFDHLSFLIHEKDRIGLIGINGTGKTSLLNIIAGVDSGDGDLA AIQQPSDYQIGYLSQNQTFDENITIAEAVFQGDSPIIKAVKNYELALAALSENGLDEGVQ RRYTQAEEAMNKQDAWTADTNAKIILQKLGIPTLEKKIGELSGGQLKRVSLAQVLIEAPD LLLLDEPTNHLDYETIEWLENFLNNYRGAVLMVTHDRYFLDRVTNRIFELSFGKLYEYKG NYETYVMEKAERERVAVEQEEKRKRLFKQELAWMRAGVQARGTKQQARIDRFQDLKENLH QVQTNGTLEADFATQRLGKKVLEIKEGNYAIDHKQLLKDFNLLIQANDRIGITGKNGAGK STLLNILAGRIPLESGLYSIGETVRIGYYTQQNEEMDPNQRMIAYLQEAAEEVKRSDGSS VGVAEMLERFLFPRFMHGTLIGKLSGGEKRRLYLLKLLISQPNVLLLDEPTNDLDIDTLT ILEDYIQTFKGAVIAVSHDRYFLDKTMDKLLVFQGNGQILSFYGTMSEYLANQKEQEKVK EKPLNKPVKEASTEKKEKTKLTYMEQKEWATIEEDITQLETKLETLTEEMNHQGDDFVRL QELQEAVTATEQLLEEKMNRWEYLSEYAD >gi|237663596|gb|GG668922.1| GENE 465 468366 - 469313 1194 315 aa, chain + ## HITS:1 COG:lin1988 KEGG:ns NR:ns ## COG: lin1988 COG0207 # Protein_GI_number: 16801054 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Listeria innocua # 5 315 4 314 314 478 71.0 1e-135 MEEAYLALGKKILEEGHFKEDRTGTGTYSLFGYQMRFDLAKGFPLLTTKRVPFGLIKSEL LWFLKGDTNIRYLLERNNHIWDEWAFERYVKSADYQGPDMTDFGHRVLQDPAFAEQYKEE HQKFCDAILNDAEFAEKYGELGNIYGAQWRHWETKDGSFIDQLANVIEMIKTNPDSRRLI VSAWNPEDVPSMALPPCHTMFQFYVNEGKLSCQLYQRSADVFLGVPFNIASYALLTHLIA HETGLEVGEFVHTLGDAHLYQNHVEQMQEQLSREVRSFPTLVLNPDKASVFDFDMEDIKV EGYDPHPTIKAPIAV >gi|237663596|gb|GG668922.1| GENE 466 469331 - 469825 608 164 aa, chain + ## HITS:1 COG:BH3450 KEGG:ns NR:ns ## COG: BH3450 COG0262 # Protein_GI_number: 15616012 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Bacillus halodurans # 1 164 1 162 163 148 45.0 5e-36 MLAAIWAQDEQGVIGKEGKLPWHLPNDLKFFKEKTIHNTLVLGRATFEGMGCRPLPNRTT IVLTSNPDYQAEGVLVMHSVEEILAYADKYEGVTVIGGGSVVFKELIPACDVLYRTMIHE TFEGDTFFPEIDWSVWEKVATVPGVVDEKNLYAHDYETYHRNDK >gi|237663596|gb|GG668922.1| GENE 467 469849 - 471018 1126 389 aa, chain + ## HITS:1 COG:lin0933 KEGG:ns NR:ns ## COG: lin0933 COG1600 # Protein_GI_number: 16800004 # Func_class: C Energy production and conversion # Function: Uncharacterized Fe-S protein # Organism: Listeria innocua # 4 371 13 374 380 401 53.0 1e-111 MPTLKEKIIQESQRLGIDKIGFTHAEPFIELEDSLHEQRERGYNSGFEHQNVEERIYPEK TFEHPKSIISIALAYPTKAQEKMPRDEKRGQFARASWGIDYHHILQDRLQKLIAFIEEQA ATEAEKEHWRFRPQVDTGEYVDTAVAQRAGLGFIGKNGLLITEEFGSFVYLGEVTTNIQF EPDEPVPNGCGDCTRCITGCPTGALLGDGRMNAQKCLSYQTQTKGMMPEDYRKKMRNVIY GCDICQLVCPYNKGKDFHFHEEMEPKIEEVYPKLAPLLTISNKEFKQQFGHLAGSWRGKK PLQRNALIALANLGGREAIPQIILCLNDQRPVIRGTAAWSLGQLAKREPEQSLEALNYLL SVETEEEVIEEAQKAIHLLTSKKGSRSTE >gi|237663596|gb|GG668922.1| GENE 468 471032 - 471652 668 206 aa, chain - ## HITS:1 COG:lin1340 KEGG:ns NR:ns ## COG: lin1340 COG1974 # Protein_GI_number: 16800408 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Listeria innocua # 4 204 2 202 204 246 62.0 3e-65 MAKRTETRQLEVLKYIYEQVELKGYPPTVREIGKAVDLSSTSTVHGHLARLEKKGLILRD PTKPRAIELTPEGLEKIGIQPTTIPMLGVVTAGEPILAVEEASDFFPLPPDLRTEENALF MLTIRGESMINAGILDGDQVIVRKQSNANNGDIVIAMTDEDEATCKRFFREVDHIRLQPE NDALAPILLDNVTILGKVVGLYRNHI >gi|237663596|gb|GG668922.1| GENE 469 471803 - 472045 418 80 aa, chain + ## HITS:1 COG:SP1473 KEGG:ns NR:ns ## COG: SP1473 COG4224 # Protein_GI_number: 15901323 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 2 79 1 78 85 76 64.0 1e-14 MLSKEKIARINELANKAKVEELSAKEKVEQQELRKEYLEAFRGGMRHHIEGMKVVDQEGT DVTPEKLKKIQREKGLHNRK >gi|237663596|gb|GG668922.1| GENE 470 472117 - 474111 2584 664 aa, chain + ## HITS:1 COG:SPy1676 KEGG:ns NR:ns ## COG: SPy1676 COG0021 # Protein_GI_number: 15675539 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Streptococcus pyogenes M1 GAS # 2 664 53 711 711 928 70.0 0 MFDKTDQLGVNTIRTLSIEAVQKANSGHPGLPMGAAPMAYALWTKHLKVNPTTSRNWVDR DRFVLSAGHGSAMLYSLLHLSGYNVTIDDLKNFRQWDSKTPGHPEVHHTDGVEATTGPLG QGIAMAVGMAMAEAHLAATYNRDSFPIMDHYTYAICGDGDLMEGVSQEASSMAGHMKLGK LIVLYDSNDISLDGPTSKAFTENVGARYEAYGWQHILVKDGNDLDEIEAAIEAAKAETDK PTLIEVKTVIGYGAPKEGTSSVHGAPIGEEGITAAKAVYGWEYPDFTVPEEVAARFKETM IGEGQKAEEAWNEMFKNYEHAHPELAKQFKEAFANQLPEGWEQELPKYELGTSAASRVTS KETIQAISKVVPSFWGGSADLSASNNTMVAAEKDFEPGQYEGRNIWFGVREFAMAAAMNG IQLHGGSHVYGGTFFVFTDYLRPAIRLAALQKVPVTYVLTHDSVAVGEDGPTHEPIEQLA SVRCIPNVHVIRPADGNETVAAWRIAMTSTETPTILVLSRQNLPVLEGTLEHASDSVQKG AYVLSPQKGEQPAGILIATGSEVNLAVEAQAKLAEEGIDVSVVSMPSFDLFEKQSAEYKE SVLPKAVTKRVAIEAAASFGWERYVGTEGKTITIDHFGASAPGGLVLEKFGFTPENVVNT YKSL >gi|237663596|gb|GG668922.1| GENE 471 474164 - 475354 1099 396 aa, chain - ## HITS:1 COG:CAC0560 KEGG:ns NR:ns ## COG: CAC0560 COG0477 # Protein_GI_number: 15893850 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 3 394 43 430 441 285 42.0 1e-76 MKKQQSGLTNQVTFLLALTCGVVVANMYYIQPIGTQIAQAFQVSIGSIGFVTMLTQLGYA LGLLFLVPLGDVVDRRKLIIRVAALSSLSLSAAFFAPSFLLFALSSFFIGLLSIVAQIII PYAAVMAGPANRGKVTGRMLGGLLTGILLSRTISGFIASAASWRTVYLIAVIFVLALVVL LQLKLPKTVIHTQTSNRLTYLGSLKSLPKLIKSQPLLREATVNGFFMFATFSIFWSTLIF FVSSPAYYWGPKEVGILAIFGLSGAFVAPIIGRLSDYYPERKIVLIGLLMQFGSFILLFL GGTHVVLLILAIIVLDIGTQFGQVANQTRVQNLGEEASNRNNTVFMFFYFIGGSLGSLIG TLMWQNYGWSGVTLTGIGFQLFALFFHFMLFAPKKK >gi|237663596|gb|GG668922.1| GENE 472 475709 - 476569 1023 286 aa, chain + ## HITS:1 COG:lin2838_1 KEGG:ns NR:ns ## COG: lin2838_1 COG1705 # Protein_GI_number: 16801898 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Listeria innocua # 52 205 154 308 340 147 60.0 2e-35 MSEQLTRSSKHIQKALKKQKAYKRATAVAGTSMILAPVVGAAVPAQAESSQQAFINEIGN SAAAVANSNDMYASVMIAQALLESSYGSSGLASAPNYNLFGVKGSYNGQSVYMPTKEYLD GQWVTVTAAFRSYNSYAESFQDHANVIRSTAFGDTYHYSGVWKSNTSSYRDATAALAGSY ATDPGYAEKLNWLIEAYNLTQYDWGAPVAQTTSYSDTTGTVDTTIDTAASATATAETVAS QSYTVANGDTLWDIAARFGTTVDNLMSLNGLTLDSVLSVGQTIQIG >gi|237663596|gb|GG668922.1| GENE 473 476798 - 477730 1048 310 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 8 308 6 306 308 408 67 1e-112 MTKGYVKSVTELIGQSPVVKLKRMVPEGAADVFVKLEFFNPGGSVKDRIALSMIQQAEAD GRLKPGQTIIEPTSGNTGIGLAMVGAALGYPVKIVMPDTMSIERRKLMQAYGADLLLTPG AEGMKGAIAKATALAEEHGYFMPLQFNNPANPMVHEQKTGKEIVDVFGKRGLDAFVSGVG TGGTVTGVGHELKRIFPDIEIVAVEPTESPVLEGGEPGPHKIQGIGAGFVPEVLDTTVYQ KVAAVSSEDALETARLMGPKEGILVGISAGAAIKAAIDLAVELGAGKRVLALVPDNGERY LSTALYEFPE >gi|237663596|gb|GG668922.1| GENE 474 477869 - 478312 570 147 aa, chain + ## HITS:1 COG:lin1791 KEGG:ns NR:ns ## COG: lin1791 COG0735 # Protein_GI_number: 16800859 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Listeria innocua # 1 146 3 148 148 207 63.0 4e-54 MDNVLVKNALAELKEANIRITPQRYAILEYLIENHTHPTADEIYRALEDHFPNMSVATVY NNLRLFTEIGFVQEMSYGDASSRFDFSSKKHYHVICQKCGKIVDFHYPGLEDVEMAASKL TGFEINEHRLELYGLCPDCQQAQQENV >gi|237663596|gb|GG668922.1| GENE 475 478610 - 479950 1682 446 aa, chain + ## HITS:1 COG:SPy1150 KEGG:ns NR:ns ## COG: SPy1150 COG0446 # Protein_GI_number: 15675127 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 2 442 3 454 456 367 43.0 1e-101 MKVVVVGCTHAGTSAVKSILANHPEAEVTVYERNDNISFLSCGIALYVGGVVKNAADLFY SNPEELASLGATVKMEHNVEEINVDDKTVTAKNLQTGATETVSYDKLVMTTGSWPIIPPI PGIDAENILLCKNYSQANVIIEKAKDAKRVVVVGGGYIGIELVEAFVESGKQVTLVDGLD RILNKYLDKPFTDVLEKELVDRGVNLALGENVQQFVADEQGKVAKVITPSQEFEADMVIM CVGFRPNTELLKDKVDMLPNGAIEVNEYMQTSNPDIFAAGDSAVVHYNPSQTKNYIPLAT NAVRQGMLVGRNLTEQKLAYRGTQGTSGLYLFGWKIGSTGVTKESAKLNGLDVEATVFED NYRPEFMPTTEKVLMELVYEKGTQRIVGGQLMSKYDITQSANTLSLAVQNKMTVEDLAIS DFFFQPHFDRPWNYLNLLAQAALENM >gi|237663596|gb|GG668922.1| GENE 476 479998 - 480606 704 202 aa, chain - ## HITS:1 COG:L167097 KEGG:ns NR:ns ## COG: L167097 COG1051 # Protein_GI_number: 15672146 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Lactococcus lactis # 1 192 1 188 200 140 44.0 2e-33 MDYLNTYKRLLALADAGLFYGKDAFDQERYQELRELTLQLISATGHEATVLPDLEKILTK EEGYPTPKVDVRGLIKKENRFLLVEDLRTKEWSLPGGYAEIGCSPKENIEKEVLEETGLV VTAKELLAVYDTDKRKDIPQLFQYYKMIFSCDILENHPFEKNIETSNCAYFSLDNLPSLS IKRTTKEQLMALMNQTTGALSD >gi|237663596|gb|GG668922.1| GENE 477 480813 - 481283 336 156 aa, chain + ## HITS:1 COG:SP0640 KEGG:ns NR:ns ## COG: SP0640 COG0456 # Protein_GI_number: 15900546 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 80 155 5 80 81 77 48.0 7e-15 MKEFTIIREKNADKKTQAAQEVLFNLPEWFGLEKETRKYIDIASTLPMWVAKDVENKILG FITLSETSKDTVEIHCMAVKKRYHRKGIGKLLIESVETYSKNNYFFIQVKTVDEGNYSVY DHTIRFYESLGFKRLEVFPTLWDAWNPCLILIKQLI >gi|237663596|gb|GG668922.1| GENE 478 481303 - 481830 524 175 aa, chain + ## HITS:1 COG:BS_paiA KEGG:ns NR:ns ## COG: BS_paiA COG0454 # Protein_GI_number: 16080268 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Bacillus subtilis # 1 171 1 171 172 152 45.0 2e-37 MSVFIRECTVADVPELEAICQETFADTYGDGENEKDLQAHYERKFSPAVLESEILHKDSQ YFFAFYNNELAGYVKLNHGDAQITYQHPQALQVERIYIRKSFKRLGLGKHLITKAIELAE EAEKETVWLGVWEHNHPAQKFYQSLGFVKTDEHDFYMGNERHTDYTMTKQLKEST >gi|237663596|gb|GG668922.1| GENE 479 481885 - 482703 758 272 aa, chain - ## HITS:1 COG:lin0157 KEGG:ns NR:ns ## COG: lin0157 COG2207 # Protein_GI_number: 16799234 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Listeria innocua # 5 271 5 271 277 221 43.0 2e-57 MNYTNSRTFNPEILYAFDPWNEETHPYNCHHHEFLEISILLEGESEYIVQGQQYHATAGT VFLFNPRTEHGEQQKAGTYSHQLHIGISNLYLEGLARNVFPNKSALLDLSHLHGAFLEKA WQIVHELNHQEVESALQIKALVIELLVYILRSLAVDQENKIETRLSKTEKRKRNLVNHTI YYLETHHDEEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSL SVKEVAKTVGYEDAYHFSKLFKKYYGKSPSQF >gi|237663596|gb|GG668922.1| GENE 480 482840 - 484588 225 582 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 295 557 247 507 563 91 27 8e-17 MNSFEWIWQYAKKNKNKLLLAVIFVVINAILIVIIPLLSGRIVDQVINQGKTEELVPILG IMIGVTVIRTVVRYSYQVLFESVGQSALFDLRKDMYVKLQELDFDFFNHTRVGDIMARMT GDTDAIRHFVSWVTYNLLECILWFIAAVIVMGTINWQLMLALILITPLIFLLTQKMSKES HPVFFEIRESFSRLNSMVEENIGGNRVVKAFSQEPYEIEKFNKHNEDYKKWNMASADVSK KYLPWLDGFAGSLNVIALVLGGLFVIQGRMTIGDLVAFNGFLWMLNMPMRMSGWLINDVQ RFTASSIKIRQLLATKPKIPIAREKEAEPIQGYVTFDHVSFHFSDDPETPILSDVSFSAK PGETIGILGETGSGKTTLVNLIARFYDPTKGTVYIDGKDAKSYSVRKLRENISMVMQDVF LFSNTIEDNIAFGNTLANLEQVQMMAEIADAHSFISRMPEGYATIVGERGVGLSGGQKQR ISLARALTKDPAILILDDTTSAVDMETESKIQKELGRLTEKKTTFIIAHRISSVREANLI LMMEKGRVVESGTHSELVEQKGKYFDVYQKQLGLTKEGESRG >gi|237663596|gb|GG668922.1| GENE 481 484581 - 486359 232 592 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 336 574 6 251 329 94 28 1e-17 MARNTFDVDETLEKEFNWSHYKRLGAYIKPYKKAVFKTLFVIILANLASMLGPYFTKIAI DQVIPQKNLSLLLILGAIFLFSLVIIGWCMRYRIYAITEIGQDILKDMRFSIFEHLQKLP FSYFDSRPHGKILIRVVNYINTLSDLLSNGLINLISDLFNVIITLIFMLFIDVKLTLYSL LLLPVLFVMVLFIQGKQRKAYQELSNKQSNLNAYIHESISGIKITQSFAREDENFQIFNE VSEEYRQSFMKAVRVQYLLWPAVQNISVITTCFIYFVGIRQLGVSVTTGTLIAFIGYINN FWNPVINIGNFYNSLITATAYLERIFETMDVVPEIQDAPHAIELPPIKGTVDFQHVYFRY EEGKNILTDVSFHIEPGQTIALVGPTGAGKTTIINLLSRFYDVNEGAVKIDGYDVRDVTL RSLRKQMGVMLQDTFIFSGTIIENIRYGNLAATEEEVIQAAKIVRAHDFIKDLKDGYETV VEERGSTLSAGQRQLISFARALLADPKILILDEATSSIDTKTEELLQEGLQQLLKGRTSF IIAHRLSTIKNSDKIFYIDGGRIVEEGSHDQLMAKHALYHHLYQSQYDLLKS >gi|237663596|gb|GG668922.1| GENE 482 486448 - 486873 457 141 aa, chain + ## HITS:1 COG:SP0740 KEGG:ns NR:ns ## COG: SP0740 COG0494 # Protein_GI_number: 15900635 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pneumoniae TIGR4 # 1 138 1 142 151 89 38.0 2e-18 MNRNFEVELTTLCMIRNQKNEILVQERQKKDWPGWTFPGGHVEKNEGMETAMVRELLEET GLVLKPQLVGVAEWLNDCSGARELATLFIAETADELPEETEQPLFWVTEKELREGPLAGS LAELFPVFFGEKQFYFKNNTA >gi|237663596|gb|GG668922.1| GENE 483 487013 - 488023 1230 336 aa, chain + ## HITS:1 COG:no KEGG:EF1596 NR:ns ## KEGG: EF1596 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 336 1 336 336 530 100.0 1e-149 MLKRKVGIVAGVFCSALLLTGCGKSAKDEFIQGIGNQNAQESGVWDFSMSISDMKFSQED GAQTNPMIGMLITQIKDASLSGKIQVDAKKEKAFNLEMKLKAMGMDVPISLVGSLDNEGK EPKLYLATDMMEYIVAVADSMTDGAIDSSQLDTEKLKGKYIDLLAMNEESTKEWQDTIKE YQESEKERKQSAKEYKEFLEGLDKDTFEKKGDTITHTFTKKELQKLIKITTETSEKGKEQ DPFEKVKDVSAKVSVNTKENKTNMLINVKPQQDKNVDMGLESLSSKISITQKAKKATISM PKKENILSEQEVEKIFSDSTSMTGLSTEDTTVAINQ >gi|237663596|gb|GG668922.1| GENE 484 488326 - 489762 1393 478 aa, chain + ## HITS:1 COG:BS_katA KEGG:ns NR:ns ## COG: BS_katA COG0753 # Protein_GI_number: 16077947 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Bacillus subtilis # 1 474 1 475 483 660 67.0 0 MKNQHLTTSQGSPVGDNQNSLTAGEFGPVLIQDVHLLEKLAHFNRERVPERVVHAKGAGA HGIFKVSQSMAQYTKADFLSEVGKETPLFARFSTVAGELGSSDTLRDPRGFALKFYTDEG NYDLVGNNTPIFFIRDAIKFPDFIHSQKRNPRTHLKSPEAVWDFWSHSPESLHQVTILMS DRGIPLSFRHMHGFGSHTFKWVNAAGEVFFVKYHFKTNQGIKNLESQLAEEIAGKNPDFH IEDLHNAIENQEFPSWTLSVQIIPYADALTMKETLFDVTKTVSQKEYPLIEVGTMTLNRN PENYFAEVEQVTFSPGNFVPGIEASPDKLLQGRLFAYGDAHRHRVGANSHQLPINQAKAP VNNYQKDGNMRFNNGNSEINYEPNSYTETPKEDPTAKISSFEVEGNVGNYSYNQDHFTQA NALYNLLPSEEKENLINNIAASLGQVKNQEIIARQIDLFTRVNPEYGARVAQAIKQQA >gi|237663596|gb|GG668922.1| GENE 485 489975 - 491408 1284 477 aa, chain - ## HITS:1 COG:lin0597 KEGG:ns NR:ns ## COG: lin0597 COG0415 # Protein_GI_number: 16799672 # Func_class: L Replication, recombination and repair # Function: Deoxyribodipyrimidine photolyase # Organism: Listeria innocua # 1 466 1 461 467 527 56.0 1e-149 MKRVIWFRRDLRLQDNKALAHALQNSAADELILLFQMNPQQFIQESANHNAFFASLASFK ERIDQEAHLQIMVGEPLDLFSRLKRKLPDWQAIYFNEDTCGFGAKRDQQAMRFFEENNIQ SFSFQDAYLHGSEEIKKNDGSKYQVFTPYYNKWKEAPKETPIPVSYTAEKIFSACLFPEE EAAYREQIARIPLTHYSVGEETARRRLNTFIDQKLQSYENKRDFPYQDQTSHLSTFLRTG ELSIRTIWQELASVPSSLSKETFKKELAWRDFYNMIYSAFPQQKEEAIQEKFRYIQWTND PEMFVKWQKGETGYPIIDAAMRQLNQTGWMHNRLRMITASFLVKNLHIDWRWGEKYFQKM LIDYDAANNIGGWQWAASTGTDAVPYFRIFNPIIQSKKFDNDGQFIKKYVPELKQVPQKY IHQPNLMNEALQTQYHVHLGENYPKPIVDYASSKKQTLFLYEASKEIHQEMNNPRFQ >gi|237663596|gb|GG668922.1| GENE 486 491541 - 492386 658 281 aa, chain - ## HITS:1 COG:no KEGG:EF1599 NR:ns ## KEGG: EF1599 # Name: not_defined # Def: transcriptional regulator Cro/CI family protein # Organism: E.faecalis # Pathway: not_defined # 1 281 1 281 281 491 100.0 1e-137 MKVAGDKIKQARKLKKITQSELANGICTQATISNIENRNLCDSLDIFSSICLRLDLEVEE CMMISEEKKIENLLNKVEDLSLRLFHLEAYNLLQEVPEGLILSNNELTTKLLYYKGITCL LGKKDKAEALFYLYRGAEIDRKVNIYNILSLNALGTLYELEKDMRKAQVYYEKSLQELEQ FKLECSLERCRIYYNSAKFYSEMKDYQKSVILSEKGIQICRDKHSIYLLDYLLYEKAFNK QMLGEDTADDYRQAYYFTQFFGNTEVLQYIEKDMKAFNISY >gi|237663596|gb|GG668922.1| GENE 487 492468 - 492530 127 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFDLLALLTGTSTYGNVPHV >gi|237663596|gb|GG668922.1| GENE 488 492695 - 494623 2153 642 aa, chain - ## HITS:1 COG:SPy1815_2 KEGG:ns NR:ns ## COG: SPy1815_2 COG1263 # Protein_GI_number: 15675645 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pyogenes M1 GAS # 103 456 13 360 385 239 38.0 1e-62 MAENYQQAAKDIIQLIGMDNIISVTHCQTRLRFILKDHEQVDGKQLEKIDLVKGVFYNGG QYQVILGTGIVTKVYDEIEKLGINVVSKAEQTAILKNNETGMRKTMRILSEIFIPIVPVI AATGLFLGLKGVIFNDTFLQLFGASVANIPESFQQIVSVITDTVFAFLPALIVWSTFKAF NATPVIGIVIGLMMVSPILPNAYAVATPDSGVKAIMAFGFIPVVGAQGSVLSAIAAGIIG AKIELFFRKKMPNILDQIFTPFMTMLITFLIMILGIGPILHTVELGMVDVVQWLIGLPLG LGGFVIGASYPLMVLIGIHHTLTMVETSLLANTGFNALITICAMYGFANVGSCLAFAKKA QDSKVKSTAIGSMLSQLFGVSEPVLFGLLIRWNLKPLLCVLFTSGLGGAILAIFHIQSNS YGLAVIPSFLMYIYSAHQLVIYLLVALLSVGVCYALTSLFAIPQEVLISDKVIEEEEREV FEMQHNTLDEQLFSPVTGYAMNLTAVNDPVFSSEMMGKGLAIMPTANKVYAPADGLLNLV AETGHAYGIQTDAGAEVLIHIGIDTVTLGQEVFQTQVTQGHRVKKGDLLGTFDRKAIKEA GLDSTVMVIITNTSSYLSVEPMMSDHNEITPEQIILNLNTPN >gi|237663596|gb|GG668922.1| GENE 489 494640 - 496313 1478 557 aa, chain - ## HITS:1 COG:BH3868 KEGG:ns NR:ns ## COG: BH3868 COG0366 # Protein_GI_number: 15616430 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus halodurans # 1 510 1 507 553 432 43.0 1e-121 MNRNWWQKEVAYQIYPRSFSDSNNDGIGDLQGIIQKLDYLENLGITLIWLSPMYPSPMAD NGYDISDYYGISSDFGTMADFDELIEEAKKRNIKVILDLVVNHTSDEHAWFQDVLKNPQS RFRDFYIIKEGREAPTNWRSNFGGSVWEKLPGEDAYYFHAFHKKQPDLNWENPELRKEIY QMIRFWLNKGIAGFRVDAINFIKKDLTWTNLPADGADQLAKVTKASRNMPGMSDFLNELK EKAFAGFDIVTVAEAAGVNYLNLSEFIGETGYFDMIFDFKWADLDVKSGSEWFYRIDWSW NDLRTLIFKQQEAMQEAGWSANFIENHDQPRATTKYLKEQAQQPNAVKTFGAMYFFLRGT PFIYQGQELGMTNFERGSIDEFDDISSIDQYYRAIKEGFTPKEALSLVNLRSRDNARTPF PWNDSMYGGFSSVKPWLGMVDNYKEINAEAEIKNSQSIFHFYKRMIAFRQKSPYTDILLY GTFEGLSNLPDNVIAYKRKLNEKTIYAFFNFGEAVPIPHYLVNGTVIFDTQSEEREQLVQ QGTLLKSYQGLLITINE >gi|237663596|gb|GG668922.1| GENE 490 496544 - 498016 1003 490 aa, chain + ## HITS:1 COG:SP1724 KEGG:ns NR:ns ## COG: SP1724 COG1621 # Protein_GI_number: 15901557 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Streptococcus pneumoniae TIGR4 # 7 486 2 478 484 457 46.0 1e-128 MSSIMNQWTDELRYAPYSSWTSAHLENLTSIIAQSSWRFKYHIQPQTGLLNDPNGFSYFN NQWHLFYQAFPFGSVHGLKSWAHLTSSDLIHWDYEGIALYPDSEYDSHGVYSGSALTIDN QLCLFYTGNVRDQTWQRFAYQNIAWLNSLGAITKESTPFLPIDPNYSSHFRDPMVFPYQE GLVLLIGASDLNGQGKIVVYFSKDRNVHNFHQLGELTFTNQELGYMVECPNLVFIDGQPV LLFCPQGLSPSVKSYQNIYPNMYTLAETFDLENLSLVQAGPFENLDEGFDVYATQAFNAP DGRALAVSWIGLPEITYPSDVEGWANGLSLVKELTIHNGKLFQYPVSETEMLRQSATTLS NGCHFLSTASFELEVDIPKNEIAFIRLLANETGSKGLLITIDTIHGKITLDRTFAGQSFA EKYGTIRETKIRKNKSVQLTIFVDCSVAEIYVNKGEKTMTGRFFPDKAQQYLHLSKTAKA CFYELENTNN >gi|237663596|gb|GG668922.1| GENE 491 498035 - 499015 843 326 aa, chain + ## HITS:1 COG:SP1725 KEGG:ns NR:ns ## COG: SP1725 COG1609 # Protein_GI_number: 15901558 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 320 1 315 321 335 54.0 5e-92 MVVKLTDVAKLAGVSPTTVSRVINNYGYLSQKTIDKVHQAMEELNYQPNGLARSLQGKST QLIGLVFPSVSHPFFGELIETLERKLFVQGYKVILCDSEKDPEKERAYLRMLAANKVDGV ITGSHNLAINEYENVSLPIVSFDRFLAPGIPIVSSQNFQGGQKATEALFASGAQKIAIIT GANNTGAPSDYRLAGYKQTMEKYGAEKTILQIDNGTSTTLKNLEIERLLQNKTVDGIFCT DDLTAITVMNIAQKLKISIPEELKVIGYDGTKLIKRIAPQLSTIVQPIDEMCDVMIDLLL RRMKDPDVALEENYPIPIQLSLSESC >gi|237663596|gb|GG668922.1| GENE 492 499075 - 499236 215 53 aa, chain - ## HITS:1 COG:no KEGG:EF1605 NR:ns ## KEGG: EF1605 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 53 1 53 53 75 100.0 5e-13 MNNYDLWKWAAGKRTEKNKNETYSAKNWWYVLLMLGVFVGIMLLYYLISVLWN >gi|237663596|gb|GG668922.1| GENE 493 499346 - 500755 1487 469 aa, chain - ## HITS:1 COG:CAP0010 KEGG:ns NR:ns ## COG: CAP0010 COG2723 # Protein_GI_number: 15004715 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Clostridium acetobutylicum # 2 465 6 466 469 419 45.0 1e-117 MVKQFKNDFLWGASSSAFQIEGAWNEDGKGLTVADYNSFKKSAVQADTKVASDFYHRFKE DIALMKELGLKTYRFSLSWARIIPTGDGEINQAGIDFYNAVIDTLLENDILPFVTLYHFD LPFALVEKYNGWADRRCVSAFQRYAQVCYQAFGDRVKNWQVTNEQNLMIRVDERMNMYDV APENVEKIRAQMDYHMFVAHALATNDCHQLVAGGKVGPSVSSTMTYPSSNKPEDVWAARM NDNFKTNYALEMYCFGEYPGYYQEYLTKCGIYPETQPEDQAILKAAKPDFIALNYYRTLV ASYLPTDEQHPLGTKEKDIDFDLYGYFKIEKNQHLKTSKYGAQIDPTGLRLVLNDYYRQY RLPLIITENGLGTPDHLTEDGKIHDDYRIAYLHDHIAACHAAISDGVELFGYCPWSVMDI LSSHQGFKKRYGFIYVNREDHELKDLRRIKKDSFYWYQSVIKNNGLSEE >gi|237663596|gb|GG668922.1| GENE 494 500755 - 502635 1777 626 aa, chain - ## HITS:1 COG:BH0296_2 KEGG:ns NR:ns ## COG: BH0296_2 COG1263 # Protein_GI_number: 15612859 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus halodurans # 98 472 2 367 368 300 45.0 7e-81 MDYQAIAKEILKDVGGKDNIVDVTHCYTRLRFVLKDTKQANKEALLQTEGVISVVESGGQ YQVVLGNKVAHVYNALEPLLAQQLTTKTSTKEKNSLGNRILNTVAAIFTPVVPAIAASGM LKGILAIAVMVANNFYQVDLKPLNTYIILSAASDALFYFMPVILGYSAAKVFKTNEYIAM VIGATLCYPTIVSLMTEESAVTLFGLHVTKANYVSTVIPIILAIFMLAYVQRFLEKVIPE VLKIIMVPTLSLLLMIPATLLLFGPIGIYLGDGVNWLYYYIMNLSPILLGGFIGGIWCVL VIFGAHRGLVPIGINDVARTGRQNLLAFAGAANFSQAGAAFGVFVRTKNKDLKAVAASAT VTALFGITEPAIYGANLRLKKPMIYAVASGAAGGALMGWGGSYGTAFANQGLLTIPVYAE AGTKAFICYLLGCGIAFFGAFLLTIFLGFNDLPLDESRQEPSFKTEAGTVKEKQRIQAPV QGQLVSLDQINDEVFASQQMGKTLAIYPTEEQIVSPGNGQVTALYPTHHAIGLKLDNGAE ILLHIGINTVELKGRAFETFVKVGERVRLGQKLLSFDKQIIQAAGYDPTVLVIVTNTAEM AVIETTKQTEITPQTNLFFMQVKEQN >gi|237663596|gb|GG668922.1| GENE 495 502918 - 504378 1333 486 aa, chain - ## HITS:1 COG:L186875 KEGG:ns NR:ns ## COG: L186875 COG1502 # Protein_GI_number: 15673156 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Lactococcus lactis # 11 486 18 487 487 566 56.0 1e-161 MKIFVWILLFLLVINVIAALITVFRKPRSISSVLAWMMTLIFLPGIGFIIYLFCGRGIDG QEVFKLSDDEKQMVQRIKEKVDVDNKKAGRDKRYDLLYDAKVLNRYFRNMDASPLAKRNS LQLFTDGQEKFQALFEDIRAAKETVHVEYYAFFNDTIGNQFLDVLIEKLHEGVEVYLIYD PWGSPGANKKFFARYVDAGGKVAPFITSRDMIRKTRLNYHLHRKIVVIDGKIGWTGGFNV GDQYLNVTEKFGYWRDTHIRLVGTAVFSLQEIFIMDWNASVKYPEERMTYHEKYFKLPED HEVEHLSLQVVSDGPDSEEEILKSGFVRMIFSAEKSVWIQTPYLIPDDSMINALLVAVRS GVDVRIMIPCMPDHPFIYRATQYYANYLHKRGIKIYIYDSGFIHAKTMVIDDELAMVGTT NQDIRSYSLNFEVSTFIYNPDIAWMLAQVFEEDIEKSVLLTDEIIKKQGYWLRFKQNFSR LLSPVL >gi|237663596|gb|GG668922.1| GENE 496 504559 - 505110 601 183 aa, chain + ## HITS:1 COG:SA1727 KEGG:ns NR:ns ## COG: SA1727 COG4843 # Protein_GI_number: 15927485 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 7 177 11 179 200 174 52.0 7e-44 MVVDLKMLAMIFIINFAYITLNTIRFMLTMKGYRVIAPLVSMAEITIYVLGLSMVLNRLD NPLNLLVYALGYAVGISVGIKIEDYLALGYIMVSVILPSTTEQFHLPETLREHGYGVTQS VAYGREGERMVLEILSPRKNERTLYKLINQLEPRAFIISYEPKFISGGFWTKKVRKRNDA ISH >gi|237663596|gb|GG668922.1| GENE 497 505169 - 506053 794 294 aa, chain - ## HITS:1 COG:no KEGG:EF1610 NR:ns ## KEGG: EF1610 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 294 1 294 294 538 100.0 1e-151 MNDLAIYYHSPQQTKQYNHLLNQSLFFPLVTFMYEHREERIILRQLKAAFATEAKLEQFL SEMIDCQLIIRENRQYRLNFPIYTAAEVASLPLAEDELPKFKGTVTEQLFWLAESFWPQV FPEEEDYFFGVSGGLTFYQKQRLASAQLSIITLEKEKTEVPTMPRYFDYLGKEQSLPEAF SALYDLLGDVNPEYYLSQARRVIKQALRGRKVSTVPNIFQESLHLTQVITIDQDHLKLLL PVATEQAEPLEAQSDILAFYYEKIANRSAIERLVFMQQLIEQLGTNSLSYLRIN >gi|237663596|gb|GG668922.1| GENE 498 506125 - 507051 1269 308 aa, chain - ## HITS:1 COG:SP1534 KEGG:ns NR:ns ## COG: SP1534 COG1227 # Protein_GI_number: 15901378 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Streptococcus pneumoniae TIGR4 # 1 308 1 310 311 377 66.0 1e-104 MSKILVFGHQNPDTDAIGAAISFAYLQKELGKETEAVALGTPSEETQYALDYFNIEAPRV VTEAASETNQVMLVDHNEFQQSISDIAEVNILAVVDHHRIANFETADPLYYRAEPVGCTS TIIYKMFKENNVTIPAQIAGMMVSAIISDTLLFKSPTCTQEDIDAAHALADIAEINLEGY GLDLLKAGTNLSDKSAEVLLDLDAKSFPMNGKTVRVAQVNTVDLAEVLDRQAELEAAMAA ENAANNYDLFVLIITNILDSDSELLAIGAEQAKIEAAFNVTLVNNRAFLPGVVSRKKQVV PQLTEVFN >gi|237663596|gb|GG668922.1| GENE 499 507147 - 507911 678 254 aa, chain - ## HITS:1 COG:SP1976 KEGG:ns NR:ns ## COG: SP1976 COG1180 # Protein_GI_number: 15901799 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pneumoniae TIGR4 # 5 254 11 261 264 355 64.0 3e-98 MTTPVTGRIHSTENFGTVDGPGVRFIVFTQGCRMRCQFCHNPDTWKIGSGGRVVTTDEVL EEALRFRSYWGEKGGITVSGGEPLLQMDFLIDLFKKAKAQGIHTTLDTCGKPFTREEPFI SQFDELMKYTDLLLFDIKHIDNEQHKLLTTQSNDNILEMATYLSEIDKPVWIRHVLVPQR SDYDEYLIRLDAFIKTLNNVDKVEVLPYHTMGKYKWEELGIPYPLEGIEPPKNDRVENAK KLLHVEDYQGYLAR >gi|237663596|gb|GG668922.1| GENE 500 507988 - 510234 2444 748 aa, chain - ## HITS:1 COG:lin1443 KEGG:ns NR:ns ## COG: lin1443 COG1882 # Protein_GI_number: 16800511 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Listeria innocua # 2 748 3 743 743 953 61.0 0 MKQWEGFKGDKWRTSVDTRDFIQNNYTEYKGDDSFLEPIAPSTDKLWTKLQELFEIQHEK NGVYDMDSDIPATITSHEPGYLIKEEEKIVGLQTDVPLKQAFMPFGGIKMANNALVSNGY ETDEEMTKIFTEYRKTHNQGVFDAYTAEMRLARKNKIITGLPDAYGRGRIIGDYRRIALY GIDYLMEQKKKDHDNTGNKEMTDDVIRLREEISEQYRALNDLKQMAASYGFDISRPAANA QEAIQWLYFGYLGAIKSQNGAAMSIGRISAFLDIYIQRDLEAGLITEFEAQEMIDHLIMK LRMVKFARTPEYNQLFSGYPIWATLSIAGMGIDGRSLVTKNDFRILHTLTNMGPSPEPNL TVLYSSHLPEGFRTYAAKIAKESSSIQFENDDLLRENWGSDDCAIACCVSATVMGKDMQF FGARANLAKAVLYAINGGVDEKTKMQVAPKYRPMTGDKLDYHEFMERYKDILDWLAELYV NTLNIIHYMHDKYAYEAPQLALMDTDLQRTFATGIAGISHATDSIMAIKHGEVEVIRDED GMAIDYVPTKEFPTYGNDNEEADAMANWILDYFMTQIKRQHTYRNSKPTTSLLTITSNVV YGKATGNTPDGRRAGKPLAPGANPSYQDGKFLGEKNGLLASLNSTARLEYTIALDGISNT QTINPNGLGKDDDTRINNLRNVLDGYFDKGGYHLNVNVFTNELLLDAQAHPEKYPNLTIR VSGYAVKFRDLTPEQQADVISRTSHDRL >gi|237663596|gb|GG668922.1| GENE 501 510524 - 511885 1403 453 aa, chain - ## HITS:1 COG:lin1326 KEGG:ns NR:ns ## COG: lin1326 COG0188 # Protein_GI_number: 16800394 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Listeria innocua # 3 435 371 798 818 402 50.0 1e-112 MDKARKREHIVAGLIKALSILDKVIATIRGSKDKKDAKKNLVSDYAFTEEQAEAIVTLQL YRLTNTDITDLQEEAKTLEQQIAELLNILNNEKELFSVMKKELREVKKQYGNPRLTQIEE EIQEIKIETAVLVAQEDVVVTVTHEGYIKRSSIRSYTASKPEEIGMKEGDFLLYAGEVNT LDHLLLVTNKGNMIYRPVHELPDLRWKEIGEHISQTILNLAIDESIIAVYPYKELSPTKT FVFITKAGMIKQTKMADFEPWRTYKSRPTSCMKLKSDQDEITNVYLTNDQDLLDVFLVSN RGFGLRYPLYEVPVVGSKAAGVKSMNLKEDDYVVNGLLVHSEGDTPIVIVTQRGGVKRML AQELTQLGRAKRGLMVLRELKKNPHRVVFMSESTDLDLLVTTQKGTQEVIQSKNYPISER TSNGSFVIDEQKDGQVMEVHEMHSAVIEEEQTN >gi|237663596|gb|GG668922.1| GENE 502 512100 - 513098 1150 332 aa, chain - ## HITS:1 COG:SPy0910 KEGG:ns NR:ns ## COG: SPy0910 COG0188 # Protein_GI_number: 15674931 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Streptococcus pyogenes M1 GAS # 7 332 4 329 819 543 77.0 1e-154 MEKRQEVQELTLEEVMGDRFGRYSKYIIQERALPDIRDGLKPVQRRILFSMNKDGNTFDK GFRKSAKSVGNIMGNYHPHGDISIYEAMVRLSQDWKLREVLIEMHGNNGSMDGDPPAAMR YTEARLSQLSGELLKDIDKNTVDFVWNFDDTEKEPTVLPAKYPNLLVNGSTGISAGYATE IPTHNLAEIIDGTVYLIDHPNASLEKLMEYIPGPDFPTGGILQGKAEIKKAYETGRGKVI LRAKTKIEPLKGGKQQIVISEIPYEVNKATLVKKMDEIRLNKKVDGIAEVRDESDRTGLQ IVVELKKDVNAEGILNYLFKNTELQINYNFNI >gi|237663596|gb|GG668922.1| GENE 503 513111 - 515168 2536 685 aa, chain - ## HITS:1 COG:L0290 KEGG:ns NR:ns ## COG: L0290 COG0187 # Protein_GI_number: 15672961 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Lactococcus lactis # 7 643 6 641 644 962 77.0 0 MAKKINNEYNDASIQVLEGLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNAVDEALSGYGN EINVTIQKDNSICVADSGRGMPTGMHASGIPTVEVIFTVLHAGGKFGQGGYKTSGGLHGV GASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKIGKTKKRNGTSVTFLPDDTIF STTNFSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYEEGIKEFVAYLNEEKDT LTPVVYFSGAKEGIEVELAYQYNDGYSENVLSFVNNVRTKDGGTHEVGMKTSMTKAYNEY ARKVGLLKEKDKNLEGSDFREGLAAVLSIRVPENLLQFEGQTKGKLGTPLARTVVDNVVG EQMGFYLQENSEMSQSLIRKAIKAREAREAARKAREESRNGKKRKKGESLLSGKLTPAQS RNPKKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTEKAKMQDILKNEEINTMIY TIGAGVGPEFSIEDCNYDKIIIMTDADTDGAHIQVLLLTFFYRYMKPLIEAGKVYIALPP LYKVSKGTGKKSVIEYAWTDGELAEVIDKVGKGYMLQRYKGLGEMNAEQLWETTMDPETR TLIRVRIDDAAQAERRVTTLMGDKVEPRRKWIEQHVQFTLEEDGSILDRSEEDTSAPTGE SLLDAEKTKEAEQTDDTEISLFDIE >gi|237663596|gb|GG668922.1| GENE 504 515373 - 515801 525 142 aa, chain - ## HITS:1 COG:L158834 KEGG:ns NR:ns ## COG: L158834 COG1832 # Protein_GI_number: 15672137 # Func_class: R General function prediction only # Function: Predicted CoA-binding protein # Organism: Lactococcus lactis # 3 136 4 138 145 159 57.0 2e-39 MTFENPSQNQIFDILKQAKNIAVVGLSNKPDRTSYKIAEILQQHGYRVLPVNPVLKGETV LGETVYGTLTEIPEKIDIVDVFRRSEFLPEVAAETLKTEAPVFWAQLGLENEEAANLLLN EGRQVIMDRCIKIELAKMADAE >gi|237663596|gb|GG668922.1| GENE 505 515889 - 516332 551 147 aa, chain - ## HITS:1 COG:lin1151 KEGG:ns NR:ns ## COG: lin1151 COG4766 # Protein_GI_number: 16800220 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Listeria innocua # 1 147 1 148 148 207 68.0 7e-54 MTELNREMIETLVRQIVTEKLMPTKQVDPSGIMSIKLPEIDVTEDDRLDTGNPADIVYTK DLFSLEESPRLGCGLMVMKDTTFDWTLEYDEIDYIISGQLDILIDGRKISATAGEIILIP KSSKIQFSVTGDARFVYVTYPADWQSQ >gi|237663596|gb|GG668922.1| GENE 506 516345 - 517445 1704 366 aa, chain - ## HITS:1 COG:lin1150 KEGG:ns NR:ns ## COG: lin1150 COG3192 # Protein_GI_number: 16800219 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Listeria innocua # 1 360 1 360 373 445 79.0 1e-125 MSINEIIMYIMVLFMIIGGIDKCIGNKLGLGEQFEEGIMAMGSLALSMVGIITLAPVLAN LLSPIVVPVYELLGADPAMFATTLLANDMGGFALAQQLANDPQAGLFAGAILGAMMGPTL VFTIPVALGIIQKDDQQFLATGVLSGIITIPFGLLAGGLTAGMPLSLIIPNLIPIIIVAA LIILGLWLAPKGMIKGFQIFGQGVVIVAIFGLVVGAIQLLLGITVIPGIAPVTEGIEVVG GIALTLAGAFCLVAVITKVFNKPLMKLGKVLGMNEVAAAGMVATLANNIPMFQMLKDMDN RGKIINIAFAVSASFVLGDHLGFTAGVAKEMIFPMIVGKLVGGITAIFVAIFMANRMLGK PETEVK >gi|237663596|gb|GG668922.1| GENE 507 517458 - 517721 434 87 aa, chain - ## HITS:1 COG:lin1148 KEGG:ns NR:ns ## COG: lin1148 COG4576 # Protein_GI_number: 16800217 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Listeria innocua # 1 83 1 84 89 92 59.0 1e-19 MLLGKVTGSLWSTRKDEKLNGWKFMMVDILNQEDEKQGFLIAADNAGAGVGDKVLISQGN AARISAEDPNVPIDAMIVGVIDSTAEE >gi|237663596|gb|GG668922.1| GENE 508 517734 - 518333 502 199 aa, chain - ## HITS:1 COG:no KEGG:EF1620 NR:ns ## KEGG: EF1620 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 199 1 199 199 361 100.0 1e-98 MNVSEMENLIQQITDQICQQLLSSSYSVALAEAKEAFPEEMFVRFPDVNWVTKEQKLARG LVVKRLTISQVNAIAHLQETDELVKNILAFLFEGKPVLVLTPIPSVSKNSRLKYRLKQTI QENVDMCQQFGLIFYHDSENYAVFQAACQKQLRSLAETKRTYITEKQLIRMTESGVSLSK NAYLTPLAKDYARKHQLLT >gi|237663596|gb|GG668922.1| GENE 509 518348 - 518974 692 208 aa, chain - ## HITS:1 COG:lin1146 KEGG:ns NR:ns ## COG: lin1146 COG4869 # Protein_GI_number: 16800215 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Propanediol utilization protein # Organism: Listeria innocua # 4 208 6 208 213 270 65.0 2e-72 MDSMNEIVEEVVKRIQQQQQNTFEVEASGRHVHLSRQEIDALFGPGYQLTKVKDLSQPGQ FVCKERITVAGPKGLFQNVVILGPERSESQVEVSMTDTRILGINAPVRESGKTEGTPGVT LMNGSAVVTLSHGLIVAKRHIHMTPEDALKNKVSNSQIVQVKVEGTRPLIFDDVVVRISP RFATYMHIDYDEANACGLTKGARGYILK >gi|237663596|gb|GG668922.1| GENE 510 518987 - 519550 307 187 aa, chain - ## HITS:1 COG:no KEGG:EF1622 NR:ns ## KEGG: EF1622 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 8 187 1 180 180 307 100.0 1e-82 MTVITEDMLRIKRLKKELEDGTDFVFPVGSFLTPAAKSYLREHRINSSFSSTNPLLSEVH SVKASSQKQEHLSKETIYEIRHLSHLLYLPFLTNEALSTEGWLYFEQQQQWLEKFILEQS LVMEPVILESKVTILTNQQRQWRYSSKEIQLQLDKIILQLKGESQLFGLFQAWATELIST MAEISRN >gi|237663596|gb|GG668922.1| GENE 511 519618 - 519908 531 96 aa, chain - ## HITS:1 COG:lin1144 KEGG:ns NR:ns ## COG: lin1144 COG4577 # Protein_GI_number: 16800213 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Listeria innocua # 1 92 1 92 94 113 91.0 8e-26 MSSTNALGMIETRGLVGAVEAADAMVKAANVTLIGKEQVGGGLVTVMVRGDVGAVKAATD AGAAAAERVGELLSVHVIPRPHTEVDAILPHATTEL >gi|237663596|gb|GG668922.1| GENE 512 520032 - 521510 1624 492 aa, chain - ## HITS:1 COG:lin1143 KEGG:ns NR:ns ## COG: lin1143 COG1012 # Protein_GI_number: 16800212 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Listeria innocua # 1 491 1 485 486 639 68.0 0 MELVDKDLRSIQETRNLIRKAKEAQQVLATFSQKQIDAIVQAVSEATFNQREKLAKMANE ETGFGIYEDKIIKNAFASKVVYDEMKDKATVGVIHDDAAKKVTEIAVPVGVIAGLIPSTN PTSTVIYKALISLKAANSIVFSPHPNALKSIIETVEIIQKAAIAAGAPEGCVSVIKTPTM QATSELMKNKETNLILATGGNAMVKAAYSSGTPAIGVGPGNGPAYIERSANVPHAVKQIM DSKTFDNGTICASEQSIIVETVNREAVKEELIKQGAYFLSPAEADKLAKFILRPNGTMNP QIVGRSVQHIASLVGLSIPKDRRLIVAEETHVGLKYPFSREKLAPIIAFYTVENWEAACA LSIEILKGEGAGHTMGIHTENKEVIREFGLRKPVSRLLVNTSGTLGGIGASTNLVPALTL GCGAVGGSSTSDNIGVENLFNLRRVAYGVRDLEEIRQEFGQTSTTSVATSCETTNQEELV NAVVAQVLARLN >gi|237663596|gb|GG668922.1| GENE 513 521501 - 522019 755 172 aa, chain - ## HITS:1 COG:lin1142 KEGG:ns NR:ns ## COG: lin1142 COG4577 # Protein_GI_number: 16800211 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Listeria innocua # 2 169 4 165 165 116 45.0 2e-26 MKALGMVEVKGFLGAISVADAALKAADVTLLKAEIINGGLTTVELIGDVAAVQAAVEVGT EVAKELNCLIAHHVISRVDAQTEVILSDPEPKSAPEPMEQVEVIEEEIETPDLEEHTGTR QKLETQRVVDLRKQAYKMNLSSLKKSEIKFANKEALIQAIMAEIERSEDEWN >gi|237663596|gb|GG668922.1| GENE 514 522033 - 522686 971 217 aa, chain - ## HITS:1 COG:lin1141 KEGG:ns NR:ns ## COG: lin1141 COG4816 # Protein_GI_number: 16800210 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Listeria innocua # 1 217 1 217 217 290 76.0 2e-78 MKNDRLGANVLSMKVIPNVDPALAKELSLKPEHRSLGIVTSDCDDVTYVALDEATKAADV TVVYGKSMYAGAANASTKLAGEVIGIIAGPSPAEVNSGLSVITQVIEEEASFYSANEDDS IVYFAHVVSRTGSFLSEQANIPEGEAIAYLIAPPLEAMVGLDAAMKAADVQMGVFYGPPS ETNFGGALLTGSQSACKAACSAFEQVIQNIADNPLSY >gi|237663596|gb|GG668922.1| GENE 515 522700 - 523611 1228 303 aa, chain - ## HITS:1 COG:lin1140 KEGG:ns NR:ns ## COG: lin1140 COG4302 # Protein_GI_number: 16800209 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, small subunit # Organism: Listeria innocua # 1 300 1 293 293 405 72.0 1e-113 MNEKELKEMIAGILTEMVADNQAVSTATVTAEEKPVTTHVTETTEIEEGLIPDITEVDLR KQLLLKNAVDPEALLKMKAFSPARLGVGRAGTRYMTSSTLRFRADHAAAQDAVFSDVSED LVKEMNFISTKTICNSKDEYLTRPDYGRQFDEENSEIIRKNTTPKAKIQMVVGDGLSSAA IEANIKEVLPAIKQGLNMYNLDFDNVVFVKYCRVPAMDKIGEITDADVVCLLVGERPGLV TAESMSAYIAYKPTVGMPEARRTVISNIHKGGTPAVEAGAYIAEIIKKMLDKKKSGIDLK EAE >gi|237663596|gb|GG668922.1| GENE 516 523629 - 524993 1676 454 aa, chain - ## HITS:1 COG:lin1139 KEGG:ns NR:ns ## COG: lin1139 COG4303 # Protein_GI_number: 16800208 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, large subunit # Organism: Listeria innocua # 1 454 1 454 454 753 79.0 0 MILKTKLFGKVYQFTSVKEVLAKANEEKSGDKLAGVAANSAEERVAAKVVLSELSLNDLF NNPVVDYDEDEVTRIIIDQVNMRIFESIKHWTVAELREFILSSETTDFDIKRISRGLTSE MIAAVCKLMSNMDLIVGAKKINIEKTANTTIGRPGTFSNRLQPNHPTDNVDGIMASVMEG LSYGAGDALIGLNPVDDSTESVKRILNKFEEFRSEWEIPTQTCVLAHVTTQMEAMRQGAP TGLVFQSIAGSEKGNTAFGLNAEILAEAQDLALHSGQAAGPNVMYFETGQGSELSSEANF GADQVTMEARCYGLAKKFDPYIVNTVVGFIGPEYLYDSKQVIRAGLEDHFMGKLTGISMG CDVCYTNHMKADQNDMENLAMLLATAGCTYIMGIPHGDDVMLNYQTTGFHETATIRETLG LRPIKEFEEWMEKMGLMENGKLTSRAGDASVFIK >gi|237663596|gb|GG668922.1| GENE 517 525011 - 526435 1527 474 aa, chain - ## HITS:1 COG:lin1138 KEGG:ns NR:ns ## COG: lin1138 COG4819 # Protein_GI_number: 16800207 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition # Organism: Listeria innocua # 4 474 3 473 473 560 60.0 1e-159 MSKETLLTVGIDLGTSTTQLVLSELTVENFASAFTVPRISISDKKVIYRSDIIFTPLLNQ SEIDAEPIKAFVAEQYRQAGIHKQDIQMGAVIITGETARKSNANNVLRALSGYAGDFVVA TAGPDLESIIAGKGAGAQTYSETKRKPVVNLDIGGGTTNLAVFKDGEVIDTACFDIGGRL IKLDQQQKITYIAPKIQEIINKKGLTLHLGDQATEQNLLPIISELVAVLENSIGLGTQSP FYQLLVTNHPLRKGEELPIVTFSGGVADCLNTTSTNLFKYGDIGLLLGKYLRKSLIFSEK EVLESAETIRATVVGAGSHTAEISGSTIAYREQILPVKNIPILKLAQEDETLTVTELGQR IQEKLNWHRIEETPQIALAIRGMSNPTFADIQRYGQGIVEGLASLVAEQIPIIVMVDEDM AKALGHALSAHLPKDYPFICLDSVKVENGDYVDIGLPVAEGAVLPVIVKTLVFN >gi|237663596|gb|GG668922.1| GENE 518 526526 - 527959 1205 477 aa, chain - ## HITS:1 COG:lin1137 KEGG:ns NR:ns ## COG: lin1137 COG3920 # Protein_GI_number: 16800206 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 2 472 3 479 485 409 48.0 1e-114 MKRLEQLCHQYTNLSESDIKELQRTARYLSSTTLYQSADVFIDVYKEMSQQALVVYHKPP AKTTSLYSGDVVGMEALLKNEPGVLRTMQTSLNSIGLLAVTQENRLIKQNIYPIRNEHRT IGVIIVEIAADEEIQADLQKEELNNCQLAKVAKSTSQVDALFIDQLAEAVLIFDAAGHLL ITNHNAQELYRKLGYRDNIIGMSYDNLSIDYTTFEYVLYQMKYKMSNQPIESKTTYLNYY FKVRKVWLASEEQLIMIIQDNTEFKEKEAEIISKSVAIREIHHRVKNNLQSVVSLLRIQE RRTQSPEAKKVLHESVNRIMAIAATHELLSKQVKDDVALRQTLEAVMYNFRHLFQGAQPI EMMMDVDPAIMVSSEQMVTISLVVNELLQNIFDHAFEPQTSGVVKLSGTLDNKMITITVT DNGKGYDVHQSNETSLGLMIVKSYVKDKLKGKITIESNKQGTKTCFYFEQNTSDVVH >gi|237663596|gb|GG668922.1| GENE 519 527960 - 528532 709 190 aa, chain - ## HITS:1 COG:lin1136 KEGG:ns NR:ns ## COG: lin1136 COG3707 # Protein_GI_number: 16800205 # Func_class: T Signal transduction mechanisms # Function: Response regulator with putative antiterminator output domain # Organism: Listeria innocua # 1 190 4 193 193 241 69.0 8e-64 MDGRIVIVDDEPITRLDIRDIVIEAGYEVVGEAADGFEAIEVCKKTQPDLVLMDIQMPIL DGLKAGKKIVQDQLASSIVFLSAYSDVQNTDKAKKLGALGYLVKPLDEKSLIPTIEMSIE RGKQTQLLLSQIDKLSLKLEERKIIEKAKGILVKENHISEEEAYQMLRTLSMNKRARMSE IAELIVMDDE >gi|237663596|gb|GG668922.1| GENE 520 528560 - 528907 457 115 aa, chain - ## HITS:1 COG:lin1108 KEGG:ns NR:ns ## COG: lin1108 COG4810 # Protein_GI_number: 16800177 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Listeria innocua # 2 115 5 116 116 151 73.0 2e-37 MEEKQRMIQEYVPGKQVTLAHIIASPNKEIYTKLGLPEGTSNALGILTITPSEAAIIAVD IATKSGDIQIGFIDRFSGSVVISGDVSSVEAALQAVIEGLQQILNFSVTCKITRT >gi|237663596|gb|GG668922.1| GENE 521 529067 - 530197 1098 376 aa, chain - ## HITS:1 COG:lin1135 KEGG:ns NR:ns ## COG: lin1135 COG1454 # Protein_GI_number: 16800204 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Listeria innocua # 1 376 1 378 379 408 55.0 1e-113 MKTIHFPTELWVGEGALANLETLHDRRVFIVTDPFMVDSGFVNEVTKHLTKSEWQIFSDI IPDPPIDKIAAGIKHLATFQGDTILALGGGSAIDAAKAMKFFGKRTLQTQIAEFIAVPTT SGTGSEVTNFSVITVAETGTKIPLVTDEIQPEIAILDTNLVMSVPPKITADTGMDVLTHV IEAYVSTEANPISDALCEKVVRLVFDNLEIAFNEGSNQQARENMHLASCMAGMAFNVTSL GLNHGIAHAAGARLHVPHGRMNAMLLPEVIAYNSGLANGKVTNEPTAKRYAQLANCLNDT QTTNARIGVQQFIRQIKQLRQKLNMPATFSDYGLPKEEVQAAIPKIAEGALMDGCTKTNP VQPTAAEVTKILNSIL >gi|237663596|gb|GG668922.1| GENE 522 530684 - 531265 749 193 aa, chain - ## HITS:1 COG:lin1172 KEGG:ns NR:ns ## COG: lin1172 COG2096 # Protein_GI_number: 16800241 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 190 1 188 188 209 55.0 2e-54 MKIYTKTGDKGMTKLVGSSTVAKDSDRVESYGTIDELNSWVGYIISQLPQENQEIKEELE ALQHLLFDAGTDLSTPIEAQRPFKLQKASVHWLEQRIDFYTAQSPDIDRFILPGGTPAAS MVHVARTIARRAERIIVRLNWTAKINEEVLIFTNRLSDYFYALARCLNVQAQRPDVFYER SEMVFHKIKEDGL >gi|237663596|gb|GG668922.1| GENE 523 531262 - 531717 566 151 aa, chain - ## HITS:1 COG:lin1109 KEGG:ns NR:ns ## COG: lin1109 COG4917 # Protein_GI_number: 16800178 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Listeria innocua # 5 147 1 143 143 163 56.0 1e-40 MEVTMKRIILMGAIGCGKTTLCQALQGKELIYDKTQAVEFHTEMIDTPGEFILHRQYYNA LNVTAAEADVIGLVQSAVETQQVFSPGFGSIFPKEIIGILTKIDLAQDSQQLEIVRQQLK SAGATRIFEISSVEKIGLQELVDYLEEDEAE >gi|237663596|gb|GG668922.1| GENE 524 531847 - 532614 220 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 226 1 226 245 89 29 3e-16 MIELKKTAVTLQQTPILKDISLVFPTGSKTCILGPNGCGKTTLLKTIAGLVPYSGSVLID GQEVHGQKRKELATKVAMMSQFTTVAFDYTVYETVLMGAYRQQAQRFLPIVSKQEKERVL YYLERTGLLPLKDKVVNQLSGGQQQRVFLAKLFVQDPEIILLDEPNNHLDIRYQQELIQQ LNEWSAQEGKTLIGVFHDIRLALTLSEKIVFMKQGKVAAQGDFQTLASKEFLQTIFETDI VSYFQKQHKVWETIQ >gi|237663596|gb|GG668922.1| GENE 525 532611 - 533618 1122 335 aa, chain - ## HITS:1 COG:BS_yvrB KEGG:ns NR:ns ## COG: BS_yvrB COG0609 # Protein_GI_number: 16080370 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Bacillus subtilis # 18 330 29 346 353 202 41.0 1e-51 MSKKTCLILMLLISMSMLFLGIKIGSVQISLTDLLQILVKKTVSEDGILEGIIWNVRLPR VVMAYLVGAGLAVSGTVMQSLLGNPLASSYTLGVSAGASLGAALIMVTGVTASILGAFLL PLTGFIFGLATVFLVLLFTQTMDSQMSNQTVVLVGMIMTLFVGAILTLITALFQDYLKQL VFWQMGSFSGSNWQKIAIYCPILLVSSLFLWFDANALDVLGLGEEHAMLAGVEVKTAKLR IILLASLLAGSAVSFVGVIGFVDLIAPHIVRRYLGATHRWLIPGSAILGGTIMVLGDTIA RTILSPREIPIGAVTALIGAPFFLYIYFKKRGVAA >gi|237663596|gb|GG668922.1| GENE 526 533611 - 534570 1238 319 aa, chain - ## HITS:1 COG:BS_yvrC KEGG:ns NR:ns ## COG: BS_yvrC COG0614 # Protein_GI_number: 16080371 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Bacillus subtilis # 21 315 20 314 314 154 32.0 2e-37 MKKFTLTMMTLGLVATLGLAGCGKQEKKATTSSEKTEVTLPTKDRSGKEITLPKEATKII SLVPSTTEVIEDLGKTDQLIAVDTQSSTMMTDLKKLPQMDMMAVDAEKLIALKPQIVYVN DINLASSESVWKQVEDAGITVVNIPTSTSIKAIKEDVQFIADSLSEHEKGQKLIKTMDQE IDEVAKIGKTIKKPKTVLFEVAALPDIYSFGNGTFLNEMIETIGAKNVLANEKGWLPVTE EAAIAAKPEVILTNVNYMKDPAKEILARKNWESVPAVQNKEVFEIDNMSSSLPNNHITKA LKQMAKAVYPEEYKDLKDE >gi|237663596|gb|GG668922.1| GENE 527 535123 - 535776 725 217 aa, chain + ## HITS:1 COG:SP0851 KEGG:ns NR:ns ## COG: SP0851 COG0344 # Protein_GI_number: 15900736 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 1 205 1 204 213 196 53.0 2e-50 MKIVILLLVAYLLGSIPSGVWIGKLFFKKDIRQFGSGNTGTTNTFRVLGKPAGITVLLMD ILKGTLATSLPYLFGLQGVNPLFFGVAAVLGHTFPIFANFKGGKAVATSAGMLLAYSPTF FIYSALIFVICLYLTSMVSLTSMISAVLITLSTIILPFTVPAILPTFNWLLTVIAIALTT FIFVRHRENIQRIKNGTESRLSFGLRAKKIKKKAVNK >gi|237663596|gb|GG668922.1| GENE 528 535795 - 536670 1028 291 aa, chain - ## HITS:1 COG:lin1322 KEGG:ns NR:ns ## COG: lin1322 COG2017 # Protein_GI_number: 16800390 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Listeria innocua # 3 290 2 289 290 254 43.0 1e-67 MTVQIENEFLIATFAEEGAELVSLQSKETGIEYIWQGNPEFWARHAPVLFPIVGRLKEDT YMYQNQAYHLTQHGFARDQVFDVIEKGGEEVSFSLKSTKETKKKYPFDFELVITYTLEHQ ELTVNYQVEYTGKEEMYFGIGGHPAFNVPLESSLTFEDYYLSFSPKKSRTQIPLAGPFID LANKTLAQTNTSFDLTHQLFENDAMIFETKGQTAITIATDESDHQVTLSYPEMPFVGIWS PTPKEAPFVCIEPWCGIADAVDATGQLAEKFGINKLPANELFKTQYMISVK >gi|237663596|gb|GG668922.1| GENE 529 536704 - 537486 885 260 aa, chain - ## HITS:1 COG:SPy1777 KEGG:ns NR:ns ## COG: SPy1777 COG4465 # Protein_GI_number: 15675618 # Func_class: K Transcription # Function: Pleiotropic transcriptional repressor # Organism: Streptococcus pyogenes M1 GAS # 1 260 1 259 260 273 56.0 2e-73 MATLLEKTRQVNELLQKNNLFDVQAELPYNKMAMILGDILESNAYIISSSGDLLGYTEKL DVNNARIKNMFKEKKFPQGYTEAVDMLKVTEANIPIDSDLTAFPFESRELYPFGLTTIVP LYGAGKRLGTIILARVEKSFNEDDLVLAEYSATVVGMQILYHQSRTIEAEVRSATAVQMA INTLSYSELKAVHAIFEALDGEEGRLTASSIADEIGITRSVIVNALRKLESAGIIESRSL GMKGTYLKVLNQQFIKELEK >gi|237663596|gb|GG668922.1| GENE 530 537507 - 538910 1348 467 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 7 467 9 466 466 523 59 1e-147 MNELNKTPKEIVKELDQYIVGQQAAKKSVAVALRNRYRRLQLEENMQQDITPKNLLMIGP TGVGKTEIARRLAKIVNAPFVKVEATKFTEVGYVGRDVESMVRDLVENAIQIVEKQQYSR VYAQALKKANQRLVKVLVPGIKKEQKQAGGNQFEQMMNMFNMAQQQQEAQEEVTEDIRTN RRTILEQLEKGLLDNREVTIEIEEPKKTMPAMNNGLEQMGIDLNETLGALSPKKKIERTV TVKEAQELLVKEESAKIVNDADIHSEAIRLAESSGIIFIDEIDKITSKSQQNSGEVSREG VQRDILPIVEGSQVNTKYGPLQTDHILFIASGAFHLSKPSDLIPELQGRFPIRVELDDLT ADDFVSILTEPNNALIKQYVALIGTENVSVIFTKEAIERLAHIAYDVNRDTDNIGARRLH TILERLLEDLLYEAPDMQMGEITITEAYVNEKLNDIVQNEDLSRYIL >gi|237663596|gb|GG668922.1| GENE 531 538925 - 539473 811 182 aa, chain - ## HITS:1 COG:lin1317 KEGG:ns NR:ns ## COG: lin1317 COG5405 # Protein_GI_number: 16800385 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease HslVU (ClpYQ), peptidase subunit # Organism: Listeria innocua # 5 182 2 179 179 244 71.0 9e-65 MVESQFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVA DAFTLEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGE VITPDDGILAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVE EL >gi|237663596|gb|GG668922.1| GENE 532 539502 - 540401 956 299 aa, chain - ## HITS:1 COG:lin1316 KEGG:ns NR:ns ## COG: lin1316 COG4974 # Protein_GI_number: 16800384 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Listeria innocua # 2 299 3 300 300 312 54.0 5e-85 MEEKNWPELFARYLIVERGYSEKTKKAYQEDIQHFFSFLKTSGNDNYLTVEHLDVRAYLS ELYDQEYSRNSISRKIASLRSFYQFLLKNEAIQENPFSYVHMKKKQLRLPRFFYEKEMDA LFESAQGEQPLDLRNQALLEVLYGTGIRVSECANLTVDAVDFQASVLLVHGKGNKDRYVP FGSFAQDALKDYLENGRALLMTKYQKKHPYVFVNHHGEQITPTGIEYVLNQLIKKSSLNA EIHPHMLRHTFATHLLNNGADMRTVQELLGHANLSTTQIYAHVTKESLQKNYRTFHPRA >gi|237663596|gb|GG668922.1| GENE 533 540613 - 541920 1508 435 aa, chain - ## HITS:1 COG:lin1315 KEGG:ns NR:ns ## COG: lin1315 COG1206 # Protein_GI_number: 16800383 # Func_class: J Translation, ribosomal structure and biogenesis # Function: NAD(FAD)-utilizing enzyme possibly involved in translation # Organism: Listeria innocua # 1 434 1 434 434 650 73.0 0 MTKKVTIIGAGLAGSEAAWQVANAGVPVDLYEMRPVKKTPAHQTENFAELVCSNSLRGNS LTNAVGVLKEEMRRLNSIIIGSADQTAVPAGGALAVDRDSFSETITEKIKSHPLITIKNE EITDIPEGIVIIATGPLTSESLSQKIQEFNGSEGFYFYDAAAPIIDKSTIDMDKVYLKSR YNKGEAAYLNCPMTEEEFNAFHEALVNAEVVPLRTFEKEKFFEGCMPIEVMAQRGIKTML FGPMKPVGLEDPKTGKRPYAVIQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGLEN AEFVRYGVMHRNSFMNSPELLKPTYQSKKRDDLFFAGQMTGVEGYVESAASGLLAGINAA RLAKGEEPIEFPRETTLGSMAYYITHAEGKHFQPMNANFGLFPELPERIRDKKERYEAIA NRALDVQAQVIQSLD >gi|237663596|gb|GG668922.1| GENE 534 542312 - 544222 1976 636 aa, chain - ## HITS:1 COG:L0298_1 KEGG:ns NR:ns ## COG: L0298_1 COG0550 # Protein_GI_number: 15673212 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Lactococcus lactis # 4 574 26 589 589 805 71.0 0 MAYKYLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLPKSKMGIDIENNYEPHYISIRG KGDVIKSLKAAAKKAEKVYLAADPDREGEAIAWHLAYLLGLDLKDKNRVVFNEITKEAVK AAFKEPRTINVDLVDAQQARRILDRLVGYSISPILWRKVKKGLSAGRVQSVALKMIIDRE NEIREFKPEEYWSIDGNFQKGRKKFKANFWGVDGKKKKLPNAEAVKEITSRIDGKDYDVT KVEKKERKRNPALPFTTSSLQQEAARKLNFRTRKTMMVAQQLYEGIALGKQGTVGLITYM RTDSTRIADSAKAEAAEFIEKTYGDEFSAHGGRKAKNTQGAQDAHEAVRPSSVLRTPDEM KKYLDKDQLKLYTLIWSRFVASQMTPAILDTMKVTLQQNGVTFIANGSKVKFKGFMQVYV EGRDDGKEDKENILPELVEGDVVKSVDIEPKQHFTQPPARFSEATLIRTLEENGVGRPST YAPTLETIQRRYYVKLTNKRFEPTELGEIVNSLVSEFFPQIVDTHFTATMETDLDKVGEG QEKWVEVVDRFYKPFEKELTNAEEKIEKIQIKDEPAGFDCELCGHPMVIKLGRYGKFYAC SNFPDCRNTKAIVKEIGVTCPVCHEGQVIERKSKNS >gi|237663596|gb|GG668922.1| GENE 535 544407 - 545060 537 217 aa, chain - ## HITS:1 COG:SP0288 KEGG:ns NR:ns ## COG: SP0288 COG1266 # Protein_GI_number: 15900222 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Streptococcus pneumoniae TIGR4 # 19 217 19 216 230 79 29.0 7e-15 METVVRKRWLFGMQLLGFLILDQIPLMMVSVVQFSTENFWFRFVSGLVAVGLGAYFVYLF VAFLKKKKLIIWTFLGIKETLPVVLLGLVIIFCVGIFGDFLLRLEGLETTSNQQSVEEIV QSIPKGLILIFAGVIGPIFEEGIFRVGIQAFFKPASKIGILVSSILFALVHTPTDIGSFV IYWGMGLALSWVYLRTGRFEAAVLTHFIWNVLGILML >gi|237663596|gb|GG668922.1| GENE 536 545151 - 546014 804 287 aa, chain - ## HITS:1 COG:SP1266 KEGG:ns NR:ns ## COG: SP1266 COG0758 # Protein_GI_number: 15901126 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Streptococcus pneumoniae TIGR4 # 81 287 79 284 286 219 52.0 5e-57 MEILQRQLLFKLAVCQGIGNLGILKVLQEAIAQKRVDFSSTEIIRIAEIKKYRELFEQSW LHHTIHSEALYIRQCQHQFMTILDAVYPKLLREIYNPPAILFYRGNLQLLSRRKIGIVGA RYATSYGLRVTEALVPKIVKEGFTIVSGLAKGIDSRSHEMAIQNGGQTIGILGTGLDVYY PYEKKELQQTMKQNQLVLTEYVNGSGPKKYHFPARNRIIAGLSLGVCVMEARKNSGSLIT AQAAMDYGREVFAVPGSIFQSFSTGCHELIQDGAKCVQTIDDICEEL >gi|237663596|gb|GG668922.1| GENE 537 546075 - 546842 1188 255 aa, chain - ## HITS:1 COG:SPy1162 KEGG:ns NR:ns ## COG: SPy1162 COG0164 # Protein_GI_number: 15675138 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Streptococcus pyogenes M1 GAS # 5 254 4 256 263 269 56.0 5e-72 MAKESIQAIKEALLTVTDATDERLASWREDERSGVQQAIKQWERRQLAKEKEWQLFKEMS QFEEAAYKKGHRLIAGIDEVGRGPLAGPVVTAAVILPKDCQLLGLNDSKKLSAKKRETLY NQIQEQAVAIGLGIADQGVIDQINIYQATKQAMKMAIDDLAFTPDYLLIDAMQLDVPQPQ ESLIKGDARSISIAAASIIAKVTRDRLMEEYDELYPGYGFKNNAGYGTKEHLLGLEKYGV TPIHRRTFAPIKDMI >gi|237663596|gb|GG668922.1| GENE 538 546844 - 547695 874 283 aa, chain - ## HITS:1 COG:L128951 KEGG:ns NR:ns ## COG: L128951 COG1161 # Protein_GI_number: 15673276 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Lactococcus lactis # 1 275 1 275 282 323 54.0 2e-88 MTIQWFPGHMAKARREVSEKIKYVDIVFELVDARLPLSSRNPMMDQIVQQKPRLVLLNKG DLADNDQNKKWQHYFQKKGYQTLVINAQQNKGINKIVPAAKEALKEKLAREQAKGLKPRA IRAMCIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRSGSQLELLDTPGILWPKF EDEEIGKKLALTGAIKDQLLHLDDLAIYGLEFFARFYPQRLTERYGLTEEELFLPAPEQL MLISQKRGFRDDYNRASEMIILEIRSGKLGTYTLDRWEELGDE >gi|237663596|gb|GG668922.1| GENE 539 547971 - 548912 992 313 aa, chain - ## HITS:1 COG:L157055 KEGG:ns NR:ns ## COG: L157055 COG1893 # Protein_GI_number: 15673305 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Lactococcus lactis # 1 313 1 312 312 407 62.0 1e-113 MKIIIAGAGAMGSRFGLMLHQAGNDVIFVDGWPEHIEAIRKNGLVADFNGEVVTAKIPIY PQTEVASIDFTADLVILFTKAMQLAGMLEALEHFLNKNTKVLCLLNGIGHEDIIKKYVPY ENILLGNTMWTAGLEGPGKVKLFGNGSIDLQNLGAQSEQAAEAVIKVLNNAGLNARYSEN ILSSIYKKACVNGTMNGLCTLLDCNMADFGETEQADQIVQQIVNEFLAVAEAEQVTLDKQ AVLQQIRSCYNRETIGLHHPSMYQDLITNHRLTEIDYINGAIVRKGKVYGIATPYCQFLT ELIHCKENLLHAK >gi|237663596|gb|GG668922.1| GENE 540 549089 - 549979 825 296 aa, chain + ## HITS:1 COG:SA2330 KEGG:ns NR:ns ## COG: SA2330 COG0583 # Protein_GI_number: 15928121 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Staphylococcus aureus N315 # 1 295 4 292 295 117 25.0 4e-26 MNIQLLKYFIEIVNTRSLSAAARNLFVTQPTLSLALKKMESELGTALFDHSDQPFQLTDT GVYLYEHGQEVVFQFDQLVTDIREMNQKPVKKQLRLGLTTLFAVQFMKEISRFLTTHPHV NLILQQDGSPKLQTMLANKEIDMGLISFPNTLPEIIHIEPLETTTKGYHVYVVVPESNPL SQYEKLTFKDLKDQRFSSLSDNFMIGRLLLDRTRSFGYEPNIILHNDDLQVLLYSLQKNN SICLLPIEYYEVGKSQGLKWIPLKDKFDYFPIGIALRRDFSLTEDVRDFIQIIKEN >gi|237663596|gb|GG668922.1| GENE 541 549988 - 551040 1267 350 aa, chain - ## HITS:1 COG:SPy0851 KEGG:ns NR:ns ## COG: SPy0851 COG3641 # Protein_GI_number: 15674884 # Func_class: R General function prediction only # Function: Predicted membrane protein, putative toxin regulator # Organism: Streptococcus pyogenes M1 GAS # 15 350 12 352 352 249 49.0 6e-66 MPTDKLDAQLTPRIFFNKVLAGTASGTIIALIPNAVLGAILKYFAEYKIIEMIIHAAQIF QLATPLIIGGLIAFQFGLTPQKMMIAGGAAFAGSGVIKFNSEVKGFIGAGTGDIINIMIT ASVAVLLLLVIDKKFGSVEIIALPIVVGVGAGLFGMLIYPYVTQITVAIGKVINNFTDFQ PIIMSILIACSFAALIISPITTVAIGLAIQLNGLSAGAAAMGIAATTVVLVINSWNVNQS GVTLAVSLGGMKMMMPNLFKYPIILIPCLFTATISAIPVVLFNISGTPQSAGFGLVGLVG PLASLDAGLGILPLLFSWFVVPIVAGLFSKFLFEKVLKIYDSKIVFAYQG >gi|237663596|gb|GG668922.1| GENE 542 551184 - 552482 1599 432 aa, chain - ## HITS:1 COG:lin1411 KEGG:ns NR:ns ## COG: lin1411 COG0508 # Protein_GI_number: 16800479 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Listeria innocua # 1 428 1 411 416 372 49.0 1e-103 MATKEIKMPHLGESVTEAAIVQWLVKPGDSVKRYDPLMEVVSDKVTTEVPSDFDGVVKEF LISLDTDVPIGTAVMTLETEETTEETEVATLAPVKEASAEQAQEHETAETTSTATSHQKN NGRYSPAVLKIAQEKKIDLTQVTGTGRDGRITRKDVTNFTPTQARTPEKTVSPGTSPSIS EEPVASQNESAATASPTETSTDKIVSADPVRKAIAKKMVQSVNEIPHAWLMVEADVTNLV QLRNSLKDEFKQQEGLSLSFFPFFAKAVIQALKKNPKINTSWDDGSIIYHKDVNLSIAVT TDEHLYVPVIQQADNYSIAGLAKEINRLAQEVRQGTLASKEMQGGTFTLNNTGTLGSVQS MGIINHPQAAILQVESINKRLVPTADGGFKVADMVNLCLSIDHRILDGQQAGKFLRDVKD NLAKYNADTDIY >gi|237663596|gb|GG668922.1| GENE 543 552506 - 552748 318 80 aa, chain - ## HITS:1 COG:BH2762 KEGG:ns NR:ns ## COG: BH2762 COG0022 # Protein_GI_number: 15615325 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Bacillus halodurans # 1 80 248 327 327 112 68.0 2e-25 MAAAKKTGKVLLVTEDNKEGSVMSEIAAMISEDALFDLDAPIQRLAGPDCPSMPYALPLE REFLINEEQVLAAMKELAEF >gi|237663596|gb|GG668922.1| GENE 544 552966 - 553688 1108 240 aa, chain - ## HITS:1 COG:lin1410 KEGG:ns NR:ns ## COG: lin1410 COG0022 # Protein_GI_number: 16800478 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Listeria innocua # 1 238 1 237 327 304 59.0 1e-82 MAEMTYLEAINLGISEEMARDEKVVIFGEDVGGDKGGVFGVTKGLAAKYGDERCFNTPLT EGLIGGLAVGLGLMGYRAIGEFQFADYILPATNQLLSEARTMRYRTKGDWTAPIVYRTPY GGGVRGGLYHSQSTEKVFCGQPGLRVVTPSNPYDAKGMIKAAIRSDDPVIFYEHKRLYRL LKDEVPADDYIVPIDKANVVRTGSDLTVISYGMTLQLALAAAEKLAAEGIDAEIVDVRAS >gi|237663596|gb|GG668922.1| GENE 545 553710 - 554696 1194 328 aa, chain - ## HITS:1 COG:lin1409 KEGG:ns NR:ns ## COG: lin1409 COG1071 # Protein_GI_number: 16800477 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit # Organism: Listeria innocua # 4 326 3 325 331 322 53.0 6e-88 MKALKKSGLSKEELIQAYREVLRGRRLDERLWQLTRIGKTSFNISGQGAEVAQVAMAMAF DPQKDYFLPYYRDMTACLVWGMTSKDILMGSFGKEVDPSSHGRQMPNHYGSKEHNIVSFS STVSTQMPLATGVGYAAQLQKADFVALTTTGEGSANQGEVQEAMNFAGVKKLPVIFVVEN NEYAISVPIEEQYANKRMADRAKAYGFEGVTVDGSDFTEVYLAFKEAVKAARGKKGPKLI ELMVSRLTSHSADDDQSVYRSKEEIEEMKKNDAVKLFEKQLLEEGYLTDEDIAKIDEEIR AEINQATDEAEAMPDPVPTSILEEVYAK >gi|237663596|gb|GG668922.1| GENE 546 554713 - 556122 832 469 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 6 468 5 457 458 325 38 3e-87 MAEQTDLLILGGGTGGYVAAIRAAQKGLNVTIVEKYKLGGTCLHKGCIPTKALLRSAEVF DTLKQAASFGIETEAASIDFSKIQQRKEGIIEQLHKGVEGLCKKNKIKILAGEGAILGPS IFSPVSGAVAVTFNDPTREEEIIVPKNVIIATGSSSKTLPNLPLDEEFILSSDGMLELEE LPESIAIIGGGVIGVEWASLLNSLGVNVTIIEFLDRLLINESATISKELKKRLEQRGINI LLGSKVQEAKVTGQKVQVEVAGQETLTVDKVMVAIGRQPNINKLGLQNTSVKYTDKGIEV NEFYQTTEGHIYAIGDCIDTLQLAHVAMKEGELAVQHLLGETVEPLNYTNVPRGVYTNPE IASVGYTRETLPAEKEVVIGTFNFNGNGKSLVYGETDGFIEVIRDKKTDDLLGVSMIGPH VTDLIAEASTAMYLDAAPIEIGEAIHAHPTMTEVLQEAALDTYGLAIHK >gi|237663596|gb|GG668922.1| GENE 547 556128 - 557210 1080 360 aa, chain - ## HITS:1 COG:lin1407 KEGG:ns NR:ns ## COG: lin1407 COG3426 # Protein_GI_number: 16800475 # Func_class: C Energy production and conversion # Function: Butyrate kinase # Organism: Listeria innocua # 4 352 5 355 355 351 49.0 1e-96 METVLVINPGSTSTKLALFANHDCLAEETLRHSVQELAPFENVVSQTSFRKQMIAEFLET HNIIQLAAVVGRGGLLKPIPGGTYLVDQQMLEDLRTERFNTHASNLGAILANEFAEKYHV PAFIVDPVVVDELQPLARISGLKGIQRRSVGHALNQKAVARKIAEDLGKTYEQSNFIVVH LGGGISLGAHQKGRMVDVVNGLDGEGPYTPERSGALPLVEFAQWILEQELTISQVKKLIA GNSGLKSYLGETDLRHIQAQIAAGDQTANYYLKGMCYQIAKSIGEMAVVLEGTIDAIILT GGAAYSQTVVQEISQKVTWIAPIKVYPGEMEMAALYEGVNRVLTGEEQALNYSEAKIEQE >gi|237663596|gb|GG668922.1| GENE 548 557229 - 558050 745 273 aa, chain - ## HITS:1 COG:lin1406 KEGG:ns NR:ns ## COG: lin1406 COG0280 # Protein_GI_number: 16800474 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Listeria innocua # 2 273 16 286 288 191 41.0 1e-48 MITVSIAGGSQPEILQLVKKALKEAEQPLQFIVFDTNENLDTENLWKYVHCSDEAAVAQE AVSLVATGQAQILLKGIIQTHTLLKEMLKSEHQLKNKPILSHVAMVELPAGKTFLLTDCA MNIAPTQATLIEIVENAKEVAQKLGLHHPKIALLSAAENFNPKMPSSVLAKEVTAHFNDQ QEATVFGPLSLDLATSEEAVAHKRYSGPIMGDADILVVPTIDVGNCLYKSLTLFGHAKVG GTIVGTKVPVVLTSRSDSTESKFHSLRFAMRQV >gi|237663596|gb|GG668922.1| GENE 549 558333 - 559367 1026 344 aa, chain + ## HITS:1 COG:L171552 KEGG:ns NR:ns ## COG: L171552 COG1434 # Protein_GI_number: 15672559 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 19 311 19 308 310 342 66.0 8e-94 MALLLFFLFIALLGFGILKINNRSILGGITLASGTLLSLVTLLFIGLDKIYLHFKNGDLI TLAIAYLLIPAVFIGICLYFIFNSRTMQTKEGKSVTAKLSAGLGLNLLIALPAFLYLLSV GTAQIPYVLFLFLLFLLLMDLLLTFLFAAYVLYSWMYQMIPLKKAVDYIIVLGSGIRSEE VPPLLKSRLDKGIEYYEKNPTAKFVVSGGQGPDEPVAEAFAMKKYLLSQNIPAEAILMED QSTTTYENMLFSKAIIQADWQKMPSDSKQPSVIFSTNNYHVLRGAMYAHRVGLKAEGVGA PTALYFLPTALIREYIALLVHDKRIVLFVFLLVTLLLGISILPI >gi|237663596|gb|GG668922.1| GENE 550 559427 - 560149 586 240 aa, chain - ## HITS:1 COG:no KEGG:EF1665 NR:ns ## KEGG: EF1665 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 240 1 240 240 411 100.0 1e-113 MNANRLKLLMMGLMVLDHISYFVPPEWALIFHVITRCVGVFFGYMAVEGFNYTRNVYRYN GRLYIWAAIMFVGNTLLNHLVNNPAVAVHNNIFFTLALGVSMLIVTKAMLEMPKISLKIV LLISILAILGIGAMFAEGGIVMLPFMLITYLARKRLVLRNCLYGALALFFLVTSFQWLGD WPTTIEMLAYNSDFMFITVLPFISLYNGERGSKAPFFKYLFYGFYPLHLWLIALIANYVH >gi|237663596|gb|GG668922.1| GENE 551 560254 - 560952 502 232 aa, chain - ## HITS:1 COG:no KEGG:EF1666 NR:ns ## KEGG: EF1666 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 232 1 232 232 374 100.0 1e-102 MKKQYYWNIPDNLLNSLKQRKKLYNFYKNEQNKARELVENCQSVLFPELVASLNKIDERI KLLIFYQNLEDCELSEEEIITVIEREYFVTFYETIEEPTTEIISSHSMYYLLQQPTKEML WDLDFSNMLKQGQLVDLMDYQKLTKCYQKLQNQAKNLIEKLNKETFYTFYSQLLLIDCQC KLLIEEALLKEESLMTVDECLTAIKQEIRKIHFEQFKYQHYLFEDLSLRYQV >gi|237663596|gb|GG668922.1| GENE 552 561203 - 561997 876 264 aa, chain + ## HITS:1 COG:BS_yvaG KEGG:ns NR:ns ## COG: BS_yvaG COG1028 # Protein_GI_number: 16080412 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Bacillus subtilis # 1 264 1 264 264 274 54.0 1e-73 MDLHLTNKLALITGSTKGIGKAIAIEMAREGTDVIINGRNEAEVTKVVKEIQTMFPDTHP QAGTADISIESQRATLLEKFPKVDILVNNMGIFEPMEYWDIDDATWEKFFTVNVLSGNAL AKAYLPKMLAQDFGRIIFIASEEAVMPSGEMPQYSMTKTMNLSLAKSLSNLTVGTHVTVN TVMPGSTLTEGVEKMLEDMYADSDIPKEDWEKDFMKNHRSRSQIQRLIRPEEIGRFVTFV ASPDSSSFSGEALRIDGGLVPTIF >gi|237663596|gb|GG668922.1| GENE 553 562126 - 562554 571 142 aa, chain + ## HITS:1 COG:SA2308 KEGG:ns NR:ns ## COG: SA2308 COG1846 # Protein_GI_number: 15928099 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Staphylococcus aureus N315 # 1 141 1 141 144 124 44.0 7e-29 MNQQQEALKAYIGLLRTSHRLEQLAKQDVTCYDLNITEFSVLELLLHKGPQTIQKIKEKI LIASSSTTYVIDQLHKKGYVTRTPSEKDRRITYVELTEAGKTLIEEIFPTHAKRIAEAFE QLSSEELTLLQKTLRKITNETK >gi|237663596|gb|GG668922.1| GENE 554 562565 - 562720 252 51 aa, chain + ## HITS:1 COG:SA2307 KEGG:ns NR:ns ## COG: SA2307 COG0346 # Protein_GI_number: 15928098 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Staphylococcus aureus N315 # 1 50 1 50 319 87 82.0 6e-18 MKKEDQLLGIHHVTAMTSDAEKNYHFFTDVLGMRLVKKTVNQDDIYTYHTS >gi|237663596|gb|GG668922.1| GENE 555 562822 - 563598 961 258 aa, chain + ## HITS:1 COG:SA2307 KEGG:ns NR:ns ## COG: SA2307 COG0346 # Protein_GI_number: 15928098 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Staphylococcus aureus N315 # 1 257 63 319 319 346 63.0 2e-95 MTFFDFPNNPKGLKGTNTISRTGFRVPSDAALTYYENRFNEFAVKHTGISEEFGKKVLRF WDFDDQAYQLISDELNQGVAAGTPWKKGPVPTEFAIYGLGPVEIAISYFHEFKEVFEEIL GFHVVAQEGNRYLLEVGQGGNGAQVVLVDDDTSSQAQQGYGEVHHVAFRLADRKSLGTWQ ALFDHLGLQNSGYVDRYYFESLYVRIGHILVELATDEPGFMGDEPYETLGEKLSLAPFLE NRREYIESVIKPFNTKRA >gi|237663596|gb|GG668922.1| GENE 556 563611 - 564213 534 200 aa, chain + ## HITS:1 COG:SA2306 KEGG:ns NR:ns ## COG: SA2306 COG0400 # Protein_GI_number: 15928097 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Staphylococcus aureus N315 # 1 184 1 184 197 217 55.0 1e-56 MHSIFKKGHPEAPVFVLLHGTGGDETSLLPIAQELNKQATVLSIRGDVSENGMNRYFKRL AEGHYDLEDLEKRGEALHKFIQQAANEHQFSLDKIIFIGYSNGANIAIQLLLTHPDSYHQ AVLYHPMFPVELTNQPDLTDTSVLLSLGEHDPIVPLPESMRVIQLFQNHGATVQEVWTQS HQLTYQEIKETQTWLAHLSS >gi|237663596|gb|GG668922.1| GENE 557 564293 - 564790 638 165 aa, chain - ## HITS:1 COG:lin0622 KEGG:ns NR:ns ## COG: lin0622 COG0604 # Protein_GI_number: 16799697 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Listeria innocua # 6 161 154 309 313 210 67.0 8e-55 MRVQVAGGVGTYAIQLAKEAGAHVITTASAKNHTLLKKIGADEVIDYHTTNFAEVLTDVD LVFDTMGGEVQKNSFAVLKPNTGRLVSIVGIEDKQLAAEKNISAESIWLQPNGEQLQKIA DLMAAGKVKSIIGEVFPFSRQGIYDAHALSETHHAVGKIVVQMAE >gi|237663596|gb|GG668922.1| GENE 558 564705 - 565241 436 178 aa, chain - ## HITS:1 COG:lin0622 KEGG:ns NR:ns ## COG: lin0622 COG0604 # Protein_GI_number: 16799697 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Listeria innocua # 1 156 1 156 313 253 77.0 1e-67 MKAVVINQYGSKEVLEEAEVTLPELSEHQVLVKEYATSINPIDWKLREGYLKQMFDWSFP IILGWDVAGVITEVGSQVTDWQVGDKVFSRPETTRFGTYAEVTIVDDHLLAKIPETISFE EAAAVPLAGLTAWQALFDHGHLKEGEIVLIHAGAGGRWGRYLCDSTSKRSGRTCHHDR >gi|237663596|gb|GG668922.1| GENE 559 565359 - 566642 1418 427 aa, chain - ## HITS:1 COG:CAC3584 KEGG:ns NR:ns ## COG: CAC3584 COG0577 # Protein_GI_number: 15896818 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 1 424 1 438 440 119 25.0 1e-26 MKFRDILKSASTNLMRNKGRTVLTIIAIFIGAFTIALTTGVNIGVNDYIDKQVGSVGGAN QLFIQPKMEMNVGNGTEPSKYNPEKKTSTIQQQSMLAEKDIEKIKKISDVTSVEPMKSVA IDYIKGADKHKYVFSATSALDEMTIDLAAGRKVSQTSQDFEINLSPEYVKALGYTSSKAA VGETVQLGISSSLKGQEQVIEAKIVGVRNASVIQNGLSLMNKALIDKVVSINQADLPEHL KNQYAMIIAEVKKDSTPEQIKDIKKDLDKAGYLATTVEDEIGMIRNIINAITGVLTMFGA IALLAASFGIINTLYMSVQERTREIGLMKAMGLSNGKVFTIFSVEAALIGFFGSILGILG AVGVGNLVNRLATDSFLKALTGFKLIQFSLPSSLTIILVIMFIAFLAGTLPARRAAKLDP IESLRYE >gi|237663596|gb|GG668922.1| GENE 560 566643 - 567323 288 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 3 202 4 199 223 115 35 4e-24 MAVIEAKNIKKSYGKNETKFDALKGVDLKVEKGESVAIIGKSGSGKSTFMHILALLDQPT SGDIYLNGKNVTSIRKKVLNKTRNEEFGFVFQQFFMNAKDTVLNNVLLPLKIGGISGSKR KKMALDALKAVGLEDKVQNKANNLSGGQKQRVCIARALVNNPQIIFADEPTGNLDSATGK KIEELLFDLNKNKGITLIIVTHDPDLAARCDRQVHVRDGLIVGGDE >gi|237663596|gb|GG668922.1| GENE 561 567516 - 568247 519 243 aa, chain - ## HITS:1 COG:no KEGG:EF1674 NR:ns ## KEGG: EF1674 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 243 1 243 243 354 100.0 2e-96 MKFKTALRYRVIYQVRSLAIYFGFYALFGILFPLIGLLFSNDVNTVSSDAVIPCLVFMGI LSFLGMNTDFKLFIQNGLSRWTIFLVNFVSNAILSLVGSLAVLVLIKVFSGNFISHFQLS MKLIDVYAQGNFFMSWLLFFILLMLSGSLGLLAGVFNDRIDGVKKLIVLLLLLMIPILLG TIAQLGGAPMRLRMLHILQTMVGYQSTGFTVLPLLLTISCFVGINLGLAYLLNKHREIKR VNA >gi|237663596|gb|GG668922.1| GENE 562 568249 - 568545 263 98 aa, chain - ## HITS:1 COG:no KEGG:EF1675 NR:ns ## KEGG: EF1675 # Name: not_defined # Def: ABC transporter, ATP-binding protein # Organism: E.faecalis # Pathway: not_defined # 1 98 187 284 284 183 98.0 2e-45 MIEEIANLLEDIIIIDQGKLIRAESIETILKNGRIVSGPKEQVERYTQSLEILGMDTLGG AVTAYVYGDLPTEKAEVQIAPLNLQTYFVQLTNRKKEK >gi|237663596|gb|GG668922.1| GENE 563 568699 - 569226 511 175 aa, chain - ## HITS:1 COG:BH3493 KEGG:ns NR:ns ## COG: BH3493 COG1131 # Protein_GI_number: 15616055 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 2 175 4 177 283 115 35.0 4e-26 MSLRVESVSKKYHQKQALDNISITFEKETIYGLLGRNGAGKSTLLNIINNRSFATSGSVK LAGETVTDNEAALTHIYLMSEDNLFPPQLKIKDIFKTTEGFYGSFDWSLAEQMLSDFDLD GKKTFKKLSTGYRSIAKLIVALSVPCEYIFLDEPVLGLDANHRELFYTYLIETYS >gi|237663596|gb|GG668922.1| GENE 564 569223 - 569591 448 122 aa, chain - ## HITS:1 COG:BH3492 KEGG:ns NR:ns ## COG: BH3492 COG1725 # Protein_GI_number: 15616054 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 119 1 119 129 113 46.0 8e-26 MEFNFSGEKPLFQQVADQIAEGIFNGAYLEGEQIPSTTEISKSYQINPATVLKGMNLLVE RQLIEKKRGIGMFVLPGAQERVRSARKEEFLNKEVLEVVAEAKKLGITAEQLKQLIERGY DA >gi|237663596|gb|GG668922.1| GENE 565 569740 - 570183 475 147 aa, chain - ## HITS:1 COG:no KEGG:EF1677 NR:ns ## KEGG: EF1677 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 147 1 147 147 169 100.0 4e-41 MIRKTILASSILGVGLLIGACGNQTQTQMNSTNTSESSQPKVTESSRKSSESASNNEGVS SDSSKSTSSTTESEILKGLAEEKTLKEKIPSLNQTTIKKVTDNEYKRILVMEEKATGTTY KSILIKKQNRLKIVNETTDELLYNGTL >gi|237663596|gb|GG668922.1| GENE 566 570304 - 570858 543 184 aa, chain - ## HITS:1 COG:lin1310 KEGG:ns NR:ns ## COG: lin1310 COG0681 # Protein_GI_number: 16800378 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Listeria innocua # 27 182 25 179 180 137 44.0 1e-32 MKKKRDYVGYLMYFLKILVPAIVAVFILRGFFLIPVRVDGHSMQKTLNQGDMIVMEKFSA IKRFDVVVFKTDTGSILIKRVIGLPGEAVRYENDQLYVNNQPIAEPYLTKNRKKDHETMP YTTNFDSKELLMQEKLPKDSYFVLGDNRRMSKDSRSFGAIHADQILGKAQFVYYPLTHMK IIPK >gi|237663596|gb|GG668922.1| GENE 567 570876 - 572309 1641 477 aa, chain - ## HITS:1 COG:lin1965 KEGG:ns NR:ns ## COG: lin1965 COG0793 # Protein_GI_number: 16801031 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Listeria innocua # 9 470 31 491 496 301 38.0 1e-81 MKNKRTVPFYQYIISLLCVAFLAGGSSYIYFDHRVKKMSQEGAITNADLSKVQDLYNEIS TNYVGEVDKNELVEGALKGMSEAIGDPYSTYLNESAANDLSESLSGDFEGIGATMTMKDG EPVVAEAPVADSPAEKAGIKEGDIIEKVDGTATKGMKLAEVVSKVRGKKGTSVELTIQRE GETKNISIKRGKIPVKTVTGELDKNDAQIGSIKITSFGKKTYQELKETITNLRDKGAKSF VIDVRQNPGGLLDQAERMASMFLKNGETIVQFEDKKGRTMKEVASKELDGGFKVKEPVAV IIDGNSASASEIFAAALHESANVPLIGTKTFGKGTVQTVKDLNDQTEIKLTVLKWLTPKG EWINEKGIEPTIKADYPEYAYLKLIPRDKTLKEGDQSEDIQNLNAILAVLAYPVDENNAN YTAETKAAVSDLQQKNGLPVTGEIDNETATKIEATLGKLILENDAAYDTAVKEIQKN >gi|237663596|gb|GG668922.1| GENE 568 572406 - 572624 289 72 aa, chain - ## HITS:1 COG:lin1971 KEGG:ns NR:ns ## COG: lin1971 COG4479 # Protein_GI_number: 16801037 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 68 1 69 77 72 60.0 1e-13 MRRSFYHYLMTLKGPAKDSETDFANEAAKDIQFPKQTEDYHELSSYLEMNADYLSNMDIF DELWEKYLENNK >gi|237663596|gb|GG668922.1| GENE 569 572630 - 573145 624 171 aa, chain - ## HITS:1 COG:SPy0466 KEGG:ns NR:ns ## COG: SPy0466 COG0225 # Protein_GI_number: 15674584 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Streptococcus pyogenes M1 GAS # 3 170 2 169 169 243 70.0 1e-64 MEEKAIFAGGCFWCMVQPFDTQPGIISVVSGYTGGHVPNPTYEQVLTHTTGHTEAVEITF DPAIISYEQLVDIYWQQTDPTDAFGQFQDRGDNYRPVIFYRSQEQKEIAEKSKERLANSG RFTEPIVTTIEPAAPFYPAEEYHQDFYKKDALRYGLSHQRRSEFIEEKWSD >gi|237663596|gb|GG668922.1| GENE 570 573162 - 573806 691 214 aa, chain - ## HITS:1 COG:SPy1491 KEGG:ns NR:ns ## COG: SPy1491 COG4698 # Protein_GI_number: 15675395 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 23 209 8 193 195 125 37.0 8e-29 MNEEKPKTSKSIKKTQPTNLKRNPWKIAFLVLVGLIIGSVAFVTFRATQVREPDLKKIPA IVEKEGEPVVTIQSKKQQVNKLIDFYLADFQKGSEIKYKFYLENDALLNGTFQVLGHDIP FYLYFDPYVMANGNVQLKAKSLSIGTLGLPIKEVLKFAKRSYKLPKWVEINPDDQTVLLR LDQFRMQNGLFVRAEKINLVDDDIRMNIYLPKEK >gi|237663596|gb|GG668922.1| GENE 571 573808 - 574707 973 299 aa, chain - ## HITS:1 COG:SPy1492 KEGG:ns NR:ns ## COG: SPy1492 COG2755 # Protein_GI_number: 15675396 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Streptococcus pyogenes M1 GAS # 23 280 27 273 286 257 49.0 2e-68 MKKQTQHILLTVLTPILIALGVFTLLSVAIPKAKPLLKQEKVATTAQKNQKEVIHYTAIG DSLTEGIGDLTNSGGFVPIVADDLKEHYNLNGVQTDNFGKNGDRSDQILKRIKEKPEIQK GLASADVITLTVGGNDLMKVISSNIFDLKVSSFNRPQKAYQRRVRRLLEEIREYNEKAPI YVLGIYNPFYLNFSEITEMQEIVDNWNQATEEMVQEQKRAYFIPINDLLYKGRGDEVGVT GGDSETTGSSASKEDLNNLLYEEDRFHPNNLGYQIMAGAVRDEMVKTEKEWITKSEGSE >gi|237663596|gb|GG668922.1| GENE 572 574811 - 575653 1024 280 aa, chain - ## HITS:1 COG:SP1112 KEGG:ns NR:ns ## COG: SP1112 COG1307 # Protein_GI_number: 15900979 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 276 1 274 279 285 53.0 1e-76 MTNVKIVTDSSCTMEKSLRDELNIHMMPLSIMVDGVVYPDDDHLPGEKFMDMMANAKALP KTSQPPIGEFVELYDRLGEDGSEVISIHMTKGLSGTVEAARQASNLSSSKVTVIDSDFTD QGLSFQVIQAAKLAQAGAGVPEILAEIERVKQNTKLYIGISTLDNLVKGGRISRTTGLLS NIFNMKVVMDFENTELIPVAKGRGVKTFNKWFDELKSELSKIPNVRQIGISHADGLELAN GFKEGLQAIFKDMDIPVLHTNPVIATHTGKNAFAIMYYTD >gi|237663596|gb|GG668922.1| GENE 573 575785 - 576438 718 217 aa, chain + ## HITS:1 COG:L97827 KEGG:ns NR:ns ## COG: L97827 COG1272 # Protein_GI_number: 15672479 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Lactococcus lactis # 1 216 1 215 217 194 54.0 9e-50 MEKTHFSKKYLIVNEVLNAVTHGIGAGLSIAGLVILLVKGARLGSPIHVVSYAIYGSMLI LLFLSSTLFHSLIFTRAKKVFQVFDHSSIFLLIAGSYTPFCLISIGGWLGWTLFSLVWLI AIVGIVYKSLTLHKQETVKNISTIIYIVLGWLCIIAARPLYESLGFTGTALLVAGGVSYT LGAAFYSLKNVRFMHVVWHLFVMLAAILMYFSVLFYT >gi|237663596|gb|GG668922.1| GENE 574 576632 - 576829 270 65 aa, chain + ## HITS:1 COG:no KEGG:EF1686 NR:ns ## KEGG: EF1686 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 65 1 65 65 103 100.0 3e-21 MEAIRRVGFLFFVLVIGIFLGTLGLRLAFMIVTPLFILWFMSWDEKRYTRTRKQQQARYV YRKFP >gi|237663596|gb|GG668922.1| GENE 575 576935 - 577447 831 170 aa, chain - ## HITS:1 COG:L22735 KEGG:ns NR:ns ## COG: L22735 COG0503 # Protein_GI_number: 15672615 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Lactococcus lactis # 1 170 16 185 185 253 72.0 1e-67 MDLRDYIASIPDYPEKGIVFRDISPLMANGDAYREATKQIVDYAKEKRIDMVVGPEARGF IVGCPVAYELGVGFAPVRKKGKLPRETIEVTYDLEYGSDTLTLHKDAITPGQRVLICDDL LATGGTIKATIELVEQLGGIVVGCAFLIELMDLHGRDKIDGYDIVTLMEY >gi|237663596|gb|GG668922.1| GENE 576 577450 - 579762 2225 770 aa, chain - ## HITS:1 COG:SPy0926_1 KEGG:ns NR:ns ## COG: SPy0926_1 COG0608 # Protein_GI_number: 15674946 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Streptococcus pyogenes M1 GAS # 1 571 1 570 580 537 50.0 1e-152 MKKSNYQWQLQTKTELPVEFIEQLKKEEINPLIGQLLWHRNIRTEEALRKFLHPTIEDIY DPFLMHDMEKAVARIQQAVEAGEQILVYGDYDADGITSTTVMKEAIELVGGMVQYFLPNR FVHGYGPNKDVFAEQIEQGVQLIVTVDNGVAGHEAINYAMAQGVDVIVTDHHELPEQLPE AYAIVHPRHPQGDYPFGDLAGVGVAFKVATALLGELPIELLDLVAIGTIADLVSLTDENR TFVKMGLQMIQTGDRIGLDVLLQEAGVKKEAVSEESIGFTIGPRLNALGRLGEAAPGVEL MTTFDEEQALEIAKYIDQQNNERKDIVTTIAKEALDLIDPNAPVHILAKQGWHEGVLGIV AGRIMQETGKPTIILAIDESGTTAKGSGRSISALNLYEALNEVREQFTHFGGHHMAAGMT LPVENIPFVQEHLAHFIEKNQIDMANGQELLISESLAVSQATTTFIDQLRILAPFGTDNT VPTFVFKEITPTQIRQIGADNAHLKFQMNQEGAQLDAIAFQMGPQADELAQGTADVAGQL SINEWNGRKKPQLMVTDFAVLGRQLFDFRGKNNQTKPIPSEATAYLLFDEKNQKFISDPT ANIIVWSNQEELVEAVSQNQIEQLVFVDCPVEAITVKEIVEATEIQRIYMMFISPEEAYL NGMASREQFATLYKFILQQKEVNLRSQLSKVANYLNIQEKLLIFMIQVFFDLGFVTIESG VLNSIEKPDNRPLTESQVYQQRLKKIKTEEFLLYSDCQTIQQWLWNEEDK >gi|237663596|gb|GG668922.1| GENE 577 579917 - 580384 669 155 aa, chain - ## HITS:1 COG:BS_yrvD KEGG:ns NR:ns ## COG: BS_yrvD COG5416 # Protein_GI_number: 16079817 # Func_class: S Function unknown # Function: Uncharacterized integral membrane protein # Organism: Bacillus subtilis # 1 77 1 77 107 62 40.0 3e-10 MKNQWRVILGLVLVLIVVIFAVLNNQAVPVNFGFTKISGPLILIILGSAIIGALVGLLTS TTTIWNQRKELKAVQKELDIYKNDMDKLVKEETEKVQRSFDNQLADLQAKQAAAPQVSEP VVNEQTSNTEVDVTPVSGSRIDRYVKPRVNEEEQK >gi|237663596|gb|GG668922.1| GENE 578 580401 - 581189 894 262 aa, chain - ## HITS:1 COG:SP0675 KEGG:ns NR:ns ## COG: SP0675 COG0300 # Protein_GI_number: 15900576 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Streptococcus pneumoniae TIGR4 # 8 262 4 251 251 233 45.0 2e-61 MDLTNKVVVVTGGSAGLGEQICYEAAKQGAVVVVCARRINLIGKVREQCAVLSGREAFSY QLDIADPESVERVVEAISAEVGPIDVLVNNAGFGLFENFVEIDLAVARQMFDVNVLGMMT FTQKVAIKMIEAGQGHIINVASMAGKMATAKSTVYSATKFAVLGFSNALRLELKPLGVAV TTVNPGPIQTEFFDKADPTGTYLAAVDKIVLDPTKLAKEVVGSMGTSRREINRPFVMEAA ARFYTLFPHLGDFIAGNILNKK >gi|237663596|gb|GG668922.1| GENE 579 581190 - 582131 1026 313 aa, chain - ## HITS:1 COG:L18686 KEGG:ns NR:ns ## COG: L18686 COG1234 # Protein_GI_number: 15672612 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Lactococcus lactis # 1 299 1 300 307 343 58.0 3e-94 MEIQFLGTGAGVPAKHRNVTGIALKLLDERNAVWLFDCGEGTQLQILKSSIRPRKIEKIF ITHLHGDHIFGLPGLLSSRSFQGGTEPLEIYGPVGIADFVKTSLRVSQSRLSYPLKFIEL TKENDVIFKDKQFTVRCNILDHGITSFGYRIEEAAHEGELQVEKLQALGIPSGPLYGKLK RGETIVFDGQEINGQAFVGERKPGRIVTILGDTRKTKNSVTLARRADVLVHESTFNKHEA KMAKAYFHSTSQQAAEVAKEAQVKQLILTHISARYLTKEAYQLQEEAQEIFPNTKIVKDM DIIEIPFANEGGA >gi|237663596|gb|GG668922.1| GENE 580 582346 - 582912 656 188 aa, chain - ## HITS:1 COG:no KEGG:EF1692 NR:ns ## KEGG: EF1692 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 188 1 188 188 330 100.0 3e-89 MAKRIIIMNFDIESKSYQAFSEIKKMQAERQLKGEQMAVVTHVNDGQHQFKINDFIDFTG NNHTSKDSMIGMLVGILGGPLGILFGWFAGSMYGASKDAKEIQEAQTVFEHVIQKIDEGQ TGLLLIAEEEDNRPLNQLVMFDLGGEITRLDLEEVQQEINDANEVANEAKQSWQAKKEQH KEATSKEE >gi|237663596|gb|GG668922.1| GENE 581 583033 - 583278 400 81 aa, chain - ## HITS:1 COG:L9737 KEGG:ns NR:ns ## COG: L9737 COG1837 # Protein_GI_number: 15673550 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Lactococcus lactis # 3 75 4 75 79 83 65.0 8e-17 MADVKELILTIVRPLVSQPEAVSLEIEESTDFLEYNLTVAKEDIGRIIGKQGRVAKAIRT IVYSVRIDGPKKVRLNILDGK >gi|237663596|gb|GG668922.1| GENE 582 583290 - 583583 493 97 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227518885|ref|ZP_03948934.1| ribosomal protein S16 [Enterococcus faecalis TX0104] # 1 97 1 97 97 194 100 6e-48 MEVYLIMAVKIRLKRMGSKKSPFYRIVVADSRSPRDGRFIETVGTYNPLKDPAEVVLKED LVLDWLSKGAQPSDTVRNILSKEGVMKKHHEAKNVKK >gi|237663596|gb|GG668922.1| GENE 583 583712 - 584515 740 267 aa, chain - ## HITS:1 COG:no KEGG:EF1695 NR:ns ## KEGG: EF1695 # Name: not_defined # Def: acetyltransferase # Organism: E.faecalis # Pathway: not_defined # 27 267 1 241 241 443 100.0 1e-123 MNKKINWRRQLTQLEKQTLTELKNKEMIKQGTFYKLEQTFPEESAYTYYGLYRKEQTIQA YIVGYCFDGETLEATIVAPNVGPFFEELVQELEKQAALWGMKEVFLVMDDKQSVGLNYFN RQGIVPAFSEQYLVFQRETYSQALAKLTLLRPQVADLDSLARLLEGTPLPEDLQRTLIYK ENNQLLATLRLDHFENEWGIYGFVVTKTQRGRGLGRQVLQSALRMILENSASATIFLEVE TENQAALHLYQTEGFQVRNQYNYYQIL >gi|237663596|gb|GG668922.1| GENE 584 584657 - 585211 794 184 aa, chain + ## HITS:1 COG:NMB1796 KEGG:ns NR:ns ## COG: NMB1796 COG0431 # Protein_GI_number: 15677635 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Neisseria meningitidis MC58 # 1 181 3 187 190 157 42.0 2e-38 MTKKIGIFVGSLRKDSFNKLVAKTMADLFPADFEPVFINIGDLELYNQDLDDEGTPTEAW TTFREEVKQVDGVMFVTPEYNRSVPAVLKNALDVGSRPYGESVWDKKPGLVVSVSPGAIS GFGANHHLRQSLVFLNVPTLQQPEAYIGGITNLIGEDGKIIDGTVGFLQSIVDAYVDFFN RLTA >gi|237663596|gb|GG668922.1| GENE 585 585332 - 586084 767 250 aa, chain + ## HITS:1 COG:BH0408 KEGG:ns NR:ns ## COG: BH0408 COG0789 # Protein_GI_number: 15612971 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 239 1 234 255 154 40.0 1e-37 MEYTIKKMASLSGVSARTLRYYDEIGLLQPARINSSGYRIYGQAEVNRLQQILFYRELDL KLDEIKEILEQPDFNVEQALYEHQQKLLEKRNEIDRLLASVQQTLHHYKGEINMSDQQKF EAFKQQKVQENEEKYGKEIREKYGNETIEQANKKYLNLTEKDMQAMQNVEKDLFSKLAMY QKSPKLTSQLAQEIFQLHKDWLMYSWSSYSPEAHKGLGLMYVGDERFTSYYEQHGAGFAE ALNAIIQNYA >gi|237663596|gb|GG668922.1| GENE 586 586159 - 587577 1884 472 aa, chain - ## HITS:1 COG:SP1287 KEGG:ns NR:ns ## COG: SP1287 COG0541 # Protein_GI_number: 15901147 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Streptococcus pneumoniae TIGR4 # 1 463 1 510 523 590 64.0 1e-168 MAFESLTNRLQQAMSKIRRKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKRVRERA VGVEVLESLSPAQQIVKIVDEELTKTLGSETVELNKSPKIPTVIMMTGLQGAGKTTFTGK LAKHLMKTENARPLLIAGDVYRPAAIDQLKVLGQQLEVPVFDMGTDANPVEIVRQGLALA KEKKNDYVLIDTAGRLHIDEALMDELKQIKELADPNEILLVVDAMTGQDAVNVADSFNEQ LGITGVVITKMDGDTRGGAALSIRAVTGAPIKFVGSGEKLTDLEIFHPDRMSSRILGMGD MLTLIEKAQQDYDEKKAEELAQKMKENSFDFNDFIEQLDQVMGMGPIEDLLKMIPGMSNM PGIENVKVDPKDVARKRAMVLSMTPAERENPDLLNPSRRRRIAAGSGNSVVEVNRMIKQF KESKKMMQQMSKGDMNIPGMDQMLGGGVKGKLGKMAMNRMMKKNKKKKKKKR >gi|237663596|gb|GG668922.1| GENE 587 587582 - 587920 448 112 aa, chain - ## HITS:1 COG:SP1288 KEGG:ns NR:ns ## COG: SP1288 COG2739 # Protein_GI_number: 15901148 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 111 1 107 110 108 66.0 2e-24 MEMEKTNRMNALFEFYSTLLTEKQMNYMELYYADDFSLGEIAEEYEVSRQAVYDNIKRTE KILEEYEKKLHLYSNYVVRKEFLEQLQQYVQETYPKDSEIKKYIEQIQEIEE >gi|237663596|gb|GG668922.1| GENE 588 588004 - 588468 534 154 aa, chain - ## HITS:1 COG:lin2433 KEGG:ns NR:ns ## COG: lin2433 COG1683 # Protein_GI_number: 16801495 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 146 1 146 147 159 57.0 2e-39 MIGISSCLGGICCRYDGKSQEQEALKQLVTNGKAIMICPEVLGELPIPRPPAEIIGGDGF DVWANTAYVYTDNGEDVTETFKAGAQRAYQKLKALQITTLILKEKSPSCGSQLIYDGQFS GIKKAGVGVATAYFIQQGMTVYSEETWQLADISF >gi|237663596|gb|GG668922.1| GENE 589 588631 - 589341 897 236 aa, chain + ## HITS:1 COG:BH3157 KEGG:ns NR:ns ## COG: BH3157 COG0745 # Protein_GI_number: 15615719 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 2 235 3 236 239 270 54.0 2e-72 MKKVLVVDDEPSILTLLTFNLEKEGYQVTTSEDGKNGFELALSNQYDFIILDVMLPGMDG LEITKALRREKIDTPILILTAKDEQVDKIIGLEIGADDYLTKPFSPREVLARMKAIFRRL KPTTTETLQEDTPKAPLVIGEIRVDEQNYEVFVRNQPIELTPKEFELLVYFMKRKDRVIN RETLLERIWQYDFAGQSRIVDVHISHLRDKIEPDPKRPVYLVTVRGFGYRFQEPKR >gi|237663596|gb|GG668922.1| GENE 590 589338 - 591101 1520 587 aa, chain + ## HITS:1 COG:lin2643 KEGG:ns NR:ns ## COG: lin2643 COG0642 # Protein_GI_number: 16801705 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 10 584 16 587 591 253 30.0 6e-67 MKKRLRIEYFLVAAVMLLLFVGSIAATNFFFQKEMVAQQETYLRRKNTLLTDQLPPSVFE KGQLTNQQQLLVTHALDDAEERVTLLQKNGTVFFDSSQNEPLESHKKRPEIAAVLSGATY GSALRKSKTLNKELLYVATPVLKSGEIVGIIRISEQTALFSKNIQSFRRYIIFTFGILFL LITLFIFLLLRQKNQPLVTVLPILKRMLKHPDENRSIIQQSSEWNELYETINLLSQQVSQ TYKAYTSADEQFHELLDELMIGVFIIDTQGRLRLLNPKMQEMLGLSAKNMQSNYLEVIQD ADLIHLIHQVVAEKNSLHQEITVTQGPTPLRLDLSLRYLDDQSANDYQVLGIAYDLTRVR QLEKMQKDFVSNVSHELKTPVTSLLGFTETLIDGAKEDPEVLNQFLHIMQKDAQRLQQLI QEILELSRGSATIPYAEQEITLEKFITEILGSYQQQLAAKQLKTVVHGLPESQFFTKYEL FYPIVKNLIENAIQYSQENGQITISYAIENQQLRLSVQDTGIGISQKDQERIFERFYRVD KARSRHSGGTGLGLAIVQNYTELLGGKIAIDSHLGLGTTFTITLLAS >gi|237663596|gb|GG668922.1| GENE 591 591218 - 592072 1096 284 aa, chain - ## HITS:1 COG:lin2642 KEGG:ns NR:ns ## COG: lin2642 COG0226 # Protein_GI_number: 16801704 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Listeria innocua # 1 283 1 288 302 347 65.0 2e-95 MKKRVIAATMLSLGLLLTGCGAQGGTTEKSSEADSNKPVKIVAVGSTALQPLVDAAKDQF TQEHPNYTVSVQGGGSGTGLSQVADGAVTIGNSDVFAEEKDGVDASKLVDHRVAVVGMGP VVNKEVGVKNLTKQQLIDVFTGKVKNWKEVGGKDQEIVVINRANGSGTRATFEKWGLDGA KPVQSQEQDSSGTVRKIVEQTPGAISYLAFSYMDDSTVALSIDGVEPKEEHVKDNSWKIW SYEHMYTKGEPNKEVKAFLDYMVTDDVQKTIVKDLGYLAITDMS >gi|237663596|gb|GG668922.1| GENE 592 592183 - 593361 1434 392 aa, chain - ## HITS:1 COG:SP0035 KEGG:ns NR:ns ## COG: SP0035 COG0436 # Protein_GI_number: 15899981 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 385 1 386 389 514 66.0 1e-145 MDLTNRFNRQVNKIAVSLIRQFDEQVSGIEGILKLTLGEPDFNTPEHVKKAAKEAIDANF SHYTGMSGLLDVREAAAYFMKEKYHLTYQPATEILVTVGATEAISASLLAILEQGDKVLL PAPIYPGYEPIITLAGAEPVYLDTRDNDFVLTPEMIEAAMAEHGEQVKAIILNYPSNPTG VTYNRQELQAIADVLKKYDIFVISDEIYSELTYDESHVSIAEMLRDQTILINGLSKSHAM TGWRIGFIFAPAILTAEIIKVHQYLVTAAATVSQKAAVRALIEGMHDAEIMKEEYRKRRD FVYEQMTQLGFEVARPNGAFYIFAKIPTGYEQDSMKFCIDLAQKEAVALIPGISFGPEAE GYVRISYASDMDKLTTAMERIAHYMATQRVTH >gi|237663596|gb|GG668922.1| GENE 593 593523 - 596213 2922 896 aa, chain - ## HITS:1 COG:L130682 KEGG:ns NR:ns ## COG: L130682 COG0383 # Protein_GI_number: 15673480 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Lactococcus lactis # 1 891 1 891 899 1083 60.0 0 MTKKKVYIVSHSHWDREWYLPYEEHHMRLIELVDNVLDLIENDPEFNSFHLDGQTIILDD YLQVRPEKKEAVKKAVQAGKLKIGPFYILQDDFLISSESNVRNMLIGHLESQKWGAPVQL GYFPDTFGNMGQTPQMMQLANLPAAAFGRGVKPIGFDNQVLESDYSSQYSEMWWEGPDQT KIFGLLFANWYSNGNEIPSEKEAAIAFWKQKLADVERYASTNHLLMMNGVDHQPVQRDIT KAIALANELFPEYEFIHSNFDDYLKAVQEELPEDLGTVTGELTSQETDGWYTLANTSSAR VYLKQWNTKVQRQLENIAEPLAAMAYEVTGDYPHDQFDYAWKTLLQNHPHDSICGCSVDE VHRGMMTRFENANDVGHFLADEATRQLTEAIDTSVFPEKAHPFVLFNTSGYQKTEVVTVE VEIERLPFYTGKPEDLYHELKQKATPDYQVIDPTGKAVASRIVKEDVRFGYDLPKDAFRQ PYMAKYLTVELSVKEMAPFSWDSFALIQGETKAFEGSLLAQPATNEMENEFIQVKIENNG SLTIADKKTGETFSKLLTFEDTGDIGNEYIFFKPTEDQGITTENVTAEITNKENSPVKAS YQIKQTVMLPVAADERLEEEQKAVREFRERLAQRSTTLRPFEITTMVTMIKESNQLFFET TINNQIKDHRLRVLFPTGMVTETHEADSIYEVVTRPNQVSDTWENPTNPQHQQAFVNVHD QNKGVTIFNEGLNEYEVLADGTIAVTLIRCVGELGDWGYFATPEAQCQGEYTFKYGLSLH GKPEERFATYQQAYSAQIPFTAATTARHEGKLAPNHVYLTTAEGPIGWTAVKRQEQTNHL VVRGFNLTAQNIPCELHKETQPATCLTNVLEEPLTPAIEVDAPLRPFEIRTWRFEK >gi|237663596|gb|GG668922.1| GENE 594 596225 - 597451 1373 408 aa, chain - ## HITS:1 COG:L133416 KEGG:ns NR:ns ## COG: L133416 COG3538 # Protein_GI_number: 15673481 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 10 408 30 431 431 621 72.0 1e-178 MKHIKIGQKNFQAAFANTLLTTVKRQEDGTTFLLTGDIPAMWLRDSTAQVRPYLVIAKED EDLAQMIAGLVKRQFRYICIDPYANAFNETDNHAGHQTDKTEMNGWIWERKYEIDSLCYP VQLAYLLYKNTGMTEQFNSDFVEGVKKILNVFTTEQDHAQSPYLFERDTWRQEDTLVEAG KGTPVGKTGMTWSGFRPSDDACQYGYLVPSNMFAVVILGYIQEIFSDVLEDATIGAIAKK LQEEIEEGIQTFGRTKNQNNETIYAYEVDGLGNASVMDDSNVPNLVAAPYLGYCSTEDEQ YLTTRQTLLSKENPYFYEGKYAKGIGSSHTPENYVWPIALAMEGMTTKDKAEKERILDLL VATDAGTHLMHEGFDVDNPENYTREWFSWANMMFCELVMDYFDIRVEK >gi|237663596|gb|GG668922.1| GENE 595 597672 - 598718 954 348 aa, chain + ## HITS:1 COG:L0146 KEGG:ns NR:ns ## COG: L0146 COG1609 # Protein_GI_number: 15673482 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 1 342 1 340 345 298 45.0 1e-80 MKQPLYQQIIDYLQNEIDSGRLPVGAQVPTEKELSAQFNVSRITSKRALTELETQGVIQR HQGKGSFVQAPKHPLHTSLNKVLFLLPFADDLSVGNFYSGLAPTIQAAGLEVFMTSPNFL REKNAADIVNEFAGLVYYAATSNDYLDLLFELALMNFPVVVLDKKIHDLPFATIQSDNFA GGKTATERLIGLGHTKIGYILSGSPALQSVRQRYLGYLQALKEANLAFHTAITETNLLDE HNFKQYFEAHQLTAVVCDNDFSALHCLRNCKNLGIHVPEELSIIGFDDIQAAAFVEPPLT TMAQDFKEMGKLAGEVLLQTMQQDLQIIEDIQVPVTLIERETISTVSK >gi|237663596|gb|GG668922.1| GENE 596 598898 - 599830 887 310 aa, chain - ## HITS:1 COG:SPy0824 KEGG:ns NR:ns ## COG: SPy0824 COG0583 # Protein_GI_number: 15674863 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 298 1 298 304 231 41.0 1e-60 MNIQQMKYVAAIANNGSFREAAKKLFITQPSLSNSIRELEEELGISLFLRTNKGAFLTEE GMVFLEQAEKVLVQMELLENRYRETVTSERFSISSQHYDFLGEVIAKVLKKYGDQYKDFR VFETTTLKVIEDVKGFHSELGIIYLNEQNSVSIERYLEQANLAYEVISTFNTHIFLGNHH PLAKQKEIHLEELVPYPQVRFNQEGSNFSYFSEDLVEIPEQESVIHTTDRGTLMNLLVET NAYASGSGVVTGFTKKEIRLVPLAPALENRICLLFPKNREISPIGRYFIKELKALFKKEV DTKTFSTKEC >gi|237663596|gb|GG668922.1| GENE 597 599849 - 600547 590 232 aa, chain - ## HITS:1 COG:BH0360 KEGG:ns NR:ns ## COG: BH0360 COG3338 # Protein_GI_number: 15612923 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Bacillus halodurans # 8 228 47 270 275 126 34.0 4e-29 MKKIKNMDVEWSYTGNDGPEHWHTLCDWFAEGAKFAYQSPIALEKESAETVNSQITFHYK KEEFTEKEFKNTFHFVPPNTESYVMFENVAYHLTDIHFHMPSEHLLSGKQYPLEFHLVHM NDAGENLVVGCLFTITEEENRFSEANHPMDWENGTHQQWFNPSIFLPEERLHYHYVGSLT TPPTKGPVKWFVFDTIQKMDQAFLNKIKEGMLAFNNRPLQPLNGRKIYFSND >gi|237663596|gb|GG668922.1| GENE 598 600745 - 601377 874 210 aa, chain - ## HITS:1 COG:lin1945 KEGG:ns NR:ns ## COG: lin1945 COG0461 # Protein_GI_number: 16801011 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Listeria innocua # 4 210 3 209 209 272 66.0 3e-73 MTKVAKKIAKDLLDIEAVFLNPNEPFTWASGIKSPIYCDNRITMSYPAVRKEIAEGLAAK IKETFPEVEVIAGTATAGIPHAAWVADILGLPMVYIRSKAKDHGKGNQIEGRISEGQKMV VIEDLISTGGSVLEAAEAAEREGATVLGVAAIFTYELPKGTANFADKQMTLLTLTNYSTL IDAALEANYIEEKDVTLLQEWKKDPENWGK >gi|237663596|gb|GG668922.1| GENE 599 601379 - 602092 835 237 aa, chain - ## HITS:1 COG:L181692 KEGG:ns NR:ns ## COG: L181692 COG0284 # Protein_GI_number: 15673327 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Lactococcus lactis # 3 235 4 236 237 283 62.0 1e-76 MHDRPIIALDFPTQKEVAVFLEKFPKEEALFVKVGMELFYAEGPAIVRWLKEQGHDVFLD LKLHDIPNTVEKAMTNLAKLGVAITNVHAAGGVRMMQAAKEGLIKGTQPGAKVPELIAVT QLTSTSEEEMHHDQLINVPLETSVIHYAKCAEKAGLDGVVCSALEARGIQEATKQTFICL TPGIRPAGSAVGDQQRVVTPQHAREIGSTYIVVGRPITQAENPYEAYQEIKKDWSEK >gi|237663596|gb|GG668922.1| GENE 600 602082 - 603020 1012 312 aa, chain - ## HITS:1 COG:L182555 KEGG:ns NR:ns ## COG: L182555 COG0167 # Protein_GI_number: 15673328 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Lactococcus lactis # 4 309 5 311 311 443 74.0 1e-124 MMKNPLAVSIPGLTLKNPIIPASGCFGFGEEYANYYDLDQLGSIMIKATTPQARYGNPTP RVAETPSGMLNAIGLQNPGLEVVMQEKLPKLEKYPNLPIIANVAGACEEDYVAVCAKIGQ APNVKAIELNISCPNVKHGGIAFGTDPEVAFQLTQAVKKVASVPIYVKLSPNVTDIVPIA QAIEAGGADGFSMINTLLGMRIDLKTRKPILANQTGGLSGPAIKPVAIRLIRQVASVSQL PIIGMGGVQTVDDVLEMFMAGASAVGVGTANFTDPYICPKLIDGLPKRMEELGIESLEQL IKEVREGQQNAR >gi|237663596|gb|GG668922.1| GENE 601 603017 - 603808 807 263 aa, chain - ## HITS:1 COG:SP0963 KEGG:ns NR:ns ## COG: SP0963 COG0543 # Protein_GI_number: 15900840 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Streptococcus pneumoniae TIGR4 # 8 263 1 250 250 261 48.0 7e-70 MQRKQEMMTIVAQKQLAPRIYQLDLQGELVKEMTRPGQFVHIKVPRADLLLRRPISINQI DHSNETCRLIYRVEGAGTEVFATMKAGEQLDILGPLGNGFDITTVAAGQTAFIVGGGIGI PPLYELSKQLNEKGVKVIHFLGYASKEVAYYQQEFMALGETHFATDDGSFGAHGNVGRLL SEALAKGRIPDAVYACGANGMLKAIDSLFPTHPHVYLSLEERMACGIGACYACVCHKKGD TTGAKSVKVCDEGPIFKASEVIL >gi|237663596|gb|GG668922.1| GENE 602 603916 - 607098 3525 1060 aa, chain - ## HITS:1 COG:SP1275 KEGG:ns NR:ns ## COG: SP1275 COG0458 # Protein_GI_number: 15901135 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Streptococcus pneumoniae TIGR4 # 1 1060 1 1058 1058 1682 80.0 0 MPKRTDIKKIMVIGSGPIIIGQAAEFDYAGTQACLALKEEGYEVVLVNSNPATIMTDKEI ADHVYIEPITLEFVSRILRKERPDALLPTLGGQTGLNMAMELSESGILDELNVELLGTKL SAIDQAEDRDLFKQLMEELEQPIPESEIVNTVEQAVAFAKRIGYPIIVRPAFTLGGTGGG MCDTEEELRQIAENGLKLSPVTQCLIEKSIAGFKEIEYEVMRDSADNAIVVCNMENFDPV GIHTGDSIVFAPSQTLSDYEYQMLRDASLKIIRALKIEGGCNVQLALDPHSFNYYVIEVN PRVSRSSALASKATGYPIAKLAAKIAVGLTLDEMKNPVTGTTYAEFEPALDYVVSKIPRW PFDKFEKGARELGTQMKATGEVMAIGRNIEESLLKAVRSLEIGAYHNELAELSHVSDLEL TKKMVHAQDDRLFYLSEAIRRGYSIEELQSLTKIDLFFLDKLLHIIEIETALESHVDNVA VLKEAKQNGFSDRKIAALWGQTEQAIADFRRANQIVPVYKMVDTCAAEFESHTPYFYSTY EVENESNVSKKPSVLVLGSGPIRIGQGVEFDYATVHSVKAIQAAGYEAIIMNSNPETVST DFSVSDKLYFEPLTLEDVMNVIDLENPIGVIVQFGGQTAINLAEPLTKQGVKILGTTIED LDRAENRDLFEQALQELAIPQPPGDTATSAEEAVVIADRIGYPVLVRPSYVLGGRAMEIV ENQKDLEDYMRHAVKASPEHPVLVDSYLLGQECEVDAICDGETVLIPGIMEHIERAGVHS GDSMAVYPPQYLSQEIQATIADYTKKLALGLNCVGMMNIQFVIHENRVYVIEVNPRASRT VPFLSKITGIPMAQVATKAILGEKLTDLGYQDGLYPESKQVHVKAPVFSFTKLQKVDTYL GPEMKSTGEVMGSDYYLEKALYKAFEASGLHLPSYGAVLFTIADETKEEALEIAKRFSAI GYSLVATEGTADFLAKHQLPVKKVTKISNPEGETVLDVIRNGNAQVVINTMDKNRSSANQ DGFSIRREAVEHGIPLFTSLDTANAILKVLESRAFTTEAI >gi|237663596|gb|GG668922.1| GENE 603 607098 - 608177 1064 359 aa, chain - ## HITS:1 COG:SPy0833 KEGG:ns NR:ns ## COG: SPy0833 COG0505 # Protein_GI_number: 15674869 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Streptococcus pyogenes M1 GAS # 2 356 3 356 360 566 70.0 1e-161 MKRLLILEDGTVFEGKAFGAEGNVVGEVVFTTGMTGYQEAITDQSFNGQMITFTYPLVGN YGVNRDDYESIAPTCKGVIVKEHARVASNWRQQMTLDEFLKRKGIPGISGIDTRALTRKL RSAGTMKGSIIDAVDDLPHAFDQLKATVMPKNQVAQVSTTKPYPSPGIGRNVVVVDFGLK HSILRELSKRQCNLTVLPYNTTAEEILELSPDGVMLTNGPGDPKDVPEAIEMIQAIQGKV PIFGICLGHQLFSLANGADTYKMKFGHRGLNHPVREIATGRIDFTSQNHGYAVDEATIDP EKLLVTHVEVNDGTVEGVRHRDYPAFTVQYHPDAAPGPHDGLHLFDEFMELMDAWKEQN >gi|237663596|gb|GG668922.1| GENE 604 608180 - 609463 1554 427 aa, chain - ## HITS:1 COG:BH2538 KEGG:ns NR:ns ## COG: BH2538 COG0044 # Protein_GI_number: 15615101 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Bacillus halodurans # 1 425 1 424 428 483 59.0 1e-136 MKTLIKNGKIIKKENQLIEAALWLENGVIHAIGESFDEADFEQVFDANGQLITPGLVDVH VHFREPGFTYKETIKTGSKAAARGGFTTVCAMPNLNPVPDTAEKLSEVYDLIQKDAVVKV LQYAPITEELRSEVLTNQKALKEAGAFAFTNDGVGVQTAGTMYLAMKEAAALNMALVAHT EDESLLFGGVMHEGEVSKKLGLPGILSATEASQIARDITLAKETGVHYHVCHVSTEESVR VIRDAKKAGIHVTAEVSPHHLILVDEDIPGDEGFWKMNPPLRGLADRQALIDGLLDGTID CIATDHAPHGLEEKQQSFLNAPFGIVGSETAFQLIYTNFVETGIFTLEQVIDWMAVKPAE IFGLNAGTLTIGAPADIAVFDLATAAPIDAEAFESMAVNTPFTGWTVKGKTLMTFVDGAL AWSEEAQ >gi|237663596|gb|GG668922.1| GENE 605 609472 - 610398 1044 308 aa, chain - ## HITS:1 COG:SPy0832 KEGG:ns NR:ns ## COG: SPy0832 COG0540 # Protein_GI_number: 15674868 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Streptococcus pyogenes M1 GAS # 1 307 1 307 311 424 65.0 1e-118 MIITSERISLKHLLTAEALTDREVMGLIRRAGEFKQGAKWHPEERQYFATNLFFENSTRT HKSFEVAEKKLGLEVIEFEASRSSVQKGETLYDTVLTMSAIGVDVAVIRHGKENYYDELI QSKTIQCSIINGGDGSGQHPTQCLLDLMTIYEEFGGFEGLKVAIVGDITHSRVAKSNMQL LNRLGAEIYFSGPEEWYDHQFDVYGQYVPLDEIVEKVDVMMLLRVQHERHDGKESFSKEG YHLEYGLTNERATRLQKHAIIMHPAPVNRDVELADELVESLQSRIVAQMSNGVFMRMAIL EAILHGKA >gi|237663596|gb|GG668922.1| GENE 606 610412 - 611692 1069 426 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 13 426 5 427 447 416 49 1e-114 MSEKEFRNEDAVLDIKDRPQAFHWVGLSLQHLFTMFGATVLVPILVGIDPGIALVSSGLG TMVYLITTKGKIPAYLGSSFAFIAAMQMLMKSDGYPAIAQGAMTTGLVYLIVSLIIKKIG SDWLDKILPPIVVGPVVMVIGLGLAANAANNAMYNNNVYDFKYIAVALITLGLTIFYNMF FKGFLGLIPILLGIVSGYLVALAFGIIDLTPIKEAAWFALPNFEVPFVQYEPKLYLNAIT TMAPIAFVTMTEHIGHLMVLNKLTKRNFFQDPGLSKTLMGDGLAQIVAGFVGGPPVTSYG ENIGVLAITRVHSVFVIGGAAVFAVALGFVGKLSALILSIPGPVISGISFVLFGVIAASG LKILIDNKINFDKKKNLLIASVILVIGIGGLVFKVGTFELSSMALATVLGIVLNLILPEN ARSEEQ >gi|237663596|gb|GG668922.1| GENE 607 611709 - 612245 846 178 aa, chain - ## HITS:1 COG:BH2541 KEGG:ns NR:ns ## COG: BH2541 COG2065 # Protein_GI_number: 15615104 # Func_class: F Nucleotide transport and metabolism # Function: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase # Organism: Bacillus halodurans # 6 175 5 177 180 199 63.0 2e-51 MPKKEVVDAVTMKRALTRISYEIIERNKGIQDIVLVGIKTRGIYIAQRLAERLKQLEDID VPVGELDITLYRDDVKDMEEPELHSSDVPVSIEGKEVILVDDVLYTGRTIRAAMDAVMDL GRPRKISLAVLVDRGHRELPIRADYVGKNIPTSKTEEIIVEMEERDGADRIMISKGNE >gi|237663596|gb|GG668922.1| GENE 608 612587 - 613492 350 301 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 37 285 38 279 285 139 35 2e-31 MEQINVTIQTEKGRIDKVLSEHLPNHSRSQIQQWLKEKHVTVNGETVRANYKVTAGDEIV VTIPEPEVLDMVAEDIPLTIVYEDNDVIVVNKPQGMVVHPSAGHPKGTLVNALLHHADHL SAINDVVRPGIVHRIDKDTSGLLMVAKNDQAHESLAKQLKEKTSLRKYVALVHGVIPHDK GEINAPIGRSKVDRKMQAVIEGGKEAVTHFTVLERFDAFTLVELQLETGRTHQIRVHMKY IGYPLAGDPLYGPKKTLPGNGQFLHAKLLGFTHPTTGEQLVFEAPLPEVFEKTLHQLRNN H >gi|237663596|gb|GG668922.1| GENE 609 613479 - 613955 499 158 aa, chain - ## HITS:1 COG:SP0928 KEGG:ns NR:ns ## COG: SP0928 COG0597 # Protein_GI_number: 15900808 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Streptococcus pneumoniae TIGR4 # 7 147 9 149 153 125 50.0 3e-29 MLVVYFLISALLVGLDQWSKYLTVQNISLGETKEFIPGFLSLTHLRNTGAAWSLLEGKMI FFYVITVIVSVVIIYLLIKNYKKSIWYSVGLSFVLAGAIGNFIDRVRLGYVVDMLQTDFM NFPIFNVADSTLVVGVICIFIYLILDEKAAKEGKNGTN >gi|237663596|gb|GG668922.1| GENE 610 613961 - 614665 752 234 aa, chain - ## HITS:1 COG:no KEGG:EF1724 NR:ns ## KEGG: EF1724 # Name: not_defined # Def: CBS domain-containing protein # Organism: E.faecalis # Pathway: not_defined # 1 234 1 234 234 432 100.0 1e-120 MGERADTFLAHFNRIEKWMRERLNNPVNMGFSEMTRRLSRKEKGQIAQFEEDLLQMAQLR NAIVHERIADDFVIAEPNEWAVQRIETIEQALTKPEKVVPKFAKRVTAFEITTSLETLLT IIAKKQYSQFPIYEKGVFKGLITVRGIGVWFAIESTKGEVHIANRTVRELLASNYKRSNY QFVSIEATVFEVEQMFREQPRLEAVLISKSGHPNGELVGIVRPRDLASIHREKE >gi|237663596|gb|GG668922.1| GENE 611 614770 - 616440 1940 556 aa, chain - ## HITS:1 COG:SP1229 KEGG:ns NR:ns ## COG: SP1229 COG2759 # Protein_GI_number: 15901091 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 556 1 556 556 768 69.0 0 MKTDINIAQAATLKPIQEIAETIGLSEDSLELYGKYKAKIDFPTLQSLEAQPEGKLILVT SINPTPAGEGKSTVTIGLGDALNQINKKTVIALREPSLGPVMGIKGGATGGGYAQVLPME EINLHFTGDMHAITTANNALAALLDNHLQQGNELKIDSRRVIWKRAVDLNDRALRQVVVG LGGPFQGVPREDGFDITVASEIMAILCLAQNLTDLKERLSRIIVAYNDQREPVTVKDLNV AGALTLLLKDALKPNLVQTIEGTPAFVHGGPFANIAHGCNSILATKTALHLGDYVVTEAG FGGDLGGEKFLDIKVPSLGKAPDAVVIVATIRALKMHGGLAKDQLAEENLPALQKGFANL EKHIQNMQRYDVPVVVAINEFTQDTEKEIQLLKEACQALGVPVELTSVWAQGGAGGTNLA KTVVAEIEADTKQFQPLYNPRQTIEEKIQAIVQTIYGGEQAIFSPKAQKQISDFTKNGWD QLPICMAKTQYSLSDDPQKLGRPEGFTITIRELVPKIGAGFIVALTGDILTMPGLPKVPA ALNMDVDETGQASGLF >gi|237663596|gb|GG668922.1| GENE 612 616619 - 616825 276 68 aa, chain + ## HITS:1 COG:lin1992 KEGG:ns NR:ns ## COG: lin1992 COG1278 # Protein_GI_number: 16801058 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Listeria innocua # 1 65 1 65 66 80 66.0 7e-16 MQKGIVKWFDNRKGYGFIVYNEEDEIFVHFTAIEGDGFKSLDENQSVEFEIMEGNRGLQA AHVKKIDN >gi|237663596|gb|GG668922.1| GENE 613 616930 - 617391 277 153 aa, chain - ## HITS:1 COG:no KEGG:EF1727 NR:ns ## KEGG: EF1727 # Name: ebsA # Def: EbsA protein # Organism: E.faecalis # Pathway: not_defined # 1 153 1 153 153 274 100.0 1e-72 MKKQKFYWQPELASTIIYWSCTFCILFISLILALENNGPYLISNLVMVPFFVFAYLGIAR SFNMTETSLIVRDVLWFRKKALPLSQIEKVTYNEKSIEIFSSEFKEGSKVFLMKKKTIPL FLEALKVKKPELKVAEDHSLGLHKKEEKNKSES >gi|237663596|gb|GG668922.1| GENE 614 617492 - 617899 513 135 aa, chain + ## HITS:1 COG:BS_ypdQ KEGG:ns NR:ns ## COG: BS_ypdQ COG0328 # Protein_GI_number: 16079258 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Bacillus subtilis # 4 128 5 127 132 98 40.0 3e-21 MLRIYVDAATKGNPGESGGGIVYLTDQSRQQLHVPLGIVSNHEAEFKVLIEALKKAIANE DNQQTVLLHSDSKIVVQTIEKNYAKNEKYQPYLAEYQQLEKNFPLLLIEWLPESQNKAAD MLARQALQKFYPNKK >gi|237663596|gb|GG668922.1| GENE 615 617881 - 617964 61 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEFLLHVFNYQINKGKALSKQCYFLLG >gi|237663596|gb|GG668922.1| GENE 616 618029 - 618523 622 164 aa, chain - ## HITS:1 COG:lin0783 KEGG:ns NR:ns ## COG: lin0783 COG2606 # Protein_GI_number: 16799857 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 8 161 3 156 158 161 53.0 5e-40 MAKKKTQQKTNAMRMVEQHKVPYKEYEFAWSEDHLSAESVAESLGIEKGRIFKTLVTVGN KTGPVVAVIPGNQELDLKKLAKASGNKKVEMLHLKDLEATTGYIRGGCSPIGMKKQFPTY LAEEAQQYSAIIVSAGKRGMQIELAPEAILSLTNGQFAEITTKE >gi|237663596|gb|GG668922.1| GENE 617 618541 - 619248 571 235 aa, chain - ## HITS:1 COG:lin0494 KEGG:ns NR:ns ## COG: lin0494 COG0710 # Protein_GI_number: 16799569 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Listeria innocua # 2 228 20 245 252 213 48.0 3e-55 MVPIVAPTAEDILAEATASQTLDCDLVEWRLDYYENVADFSDVCNLSQQVMERLGQKPLL LTFRTQKEGGEMAFSEENYFALYHELVKKGALDLLDIELFANPLAADTLIHEAKKAGIKI VLCNHDFQKTPSQEEIVARLRQMQMRQADICKIAVMPQDATDVLTLLSATNEMYTHYASV PIVTMSMGQLGMISRVTGQLFGSALTFGSAQQASAPGQLSVQVLRNYLKTFEQNK >gi|237663596|gb|GG668922.1| GENE 618 619458 - 621242 193 594 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 355 579 12 233 318 79 27 4e-13 MEEKYQSEWSRELPMKEQLTIVQRLFRFAKPFRRMFYTAILFAFGLSIINILLPRVIQVF MDNYLTPKTATMQVILTFAAIYFFGVIVKSIVWFFQWYLYSMASLKTYQYIRVKLFEKLH TLGMRYFDQTPAGSTVSRVTNDTETLFEFWYVFLMVITGIFAVISSFFAMFQLSPEISFY CLIFLPILLVVIWYYQKFSSKLYRSMREKLSQLNTKLNEYISGMQIIQQFRQEKRLEKEF EETNDDYLKTRVAMIRMNSLLLSPIINLLYTLAIALALTMFGIDALHSPVEAGMIYAFVT YVQAFFNPMTQMMDFLSIFTDGIVAGSRILKIMDTEELTPQQSVGANGEIIRGKIEFRNV TFSYDGKNEVLKNISFVANPGETVALVGHTGSGKSSIINVLMRFYEFYEGQILIDDRDIR DFPMTELREKMGLVLQDAFMFYGDIAGNIRLLNPNITDEQIKQAAEFVQADKFIHTLPNT YHAKVIERGASYSSGQRQLISFARTIVTDPKILVLDEATANIDTETEGLIQEGLAKMRQG RTTIAIAHRLSTIRDANLILVLDKGQIVERGTHETLLAEGGLYADMYQLQSTEV >gi|237663596|gb|GG668922.1| GENE 619 621242 - 622993 209 583 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 352 560 37 251 329 85 28 5e-15 MSIFKKLGWFFKQEKKSYIIGVFSLMMVALVQLVPPKVIGVVVDEIVNKEIRLTKIIVWV ALLIGAGLAQYLFRYIWRMHIWGSAARLEKELRTQLFHHFTKMDSIFYQKYRTGDLMAHA TNDLNAIQNVAGAGILTFADSVITGGTTIIAMVLFVDWRLTLIALLPLPLLAVTSRVLGS KLHDAFRDSQAAFSAINDKTQESITGIKVIKTFGQEKEDLADFTEKIDDAIVKNKRTNFL DALFDPFITLIIGVSYVLTIIIGGRFIMEGTISLGQLVSFIAYIGMLVWPMFAIGRLFNV LERGNASYDRVNELLHEKTHIIERKDAIKTMAQGTISMKIDSFSYPKEETVALENIQFSL QEGETLGIVGKTGAGKTTILKLLMREYDQYQGTISFGKHNIKNYTLDALMGAMGYVPQDH FLFSMTVRDNIRFAKPHLEQAAVEQAAALAFINQEIKAFPEGYDTMVGERGVSLSGGQKQ RISIARALIVEPELLILDDALSAVDAKTEEAILSNLKETRQEKTTIITAHRLSSVMHAKE ILVLDEGKIIERGTHPELLAQKGWYQRMWEKQQLEAKIEGSES >gi|237663596|gb|GG668922.1| GENE 620 623191 - 623409 363 72 aa, chain - ## HITS:1 COG:BS_yneF KEGG:ns NR:ns ## COG: BS_yneF COG3763 # Protein_GI_number: 16078854 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 3 72 2 72 72 67 64.0 9e-12 MATGWVVLIAVIALLVGAAGGFFLARKYMQDYFKKNPPVNEDMLRMMMASMGQKPSEKKV RQMMQQMKNQGK >gi|237663596|gb|GG668922.1| GENE 621 623603 - 624496 1253 297 aa, chain - ## HITS:1 COG:lin1487 KEGG:ns NR:ns ## COG: lin1487 COG0648 # Protein_GI_number: 16800555 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Listeria innocua # 3 294 4 295 297 432 72.0 1e-121 MLLGSHVSMSGKKMLLGSAEEAASYGSTTFMIYTGAPQNTRRKPIEEMNIEAGQAFMKEH NLSNIVVHAPYIINLGNTIKTENFGFAVDFLRQEIERAQALGATQITLHPGAHVGAGPEA GIKQIVKGLNEVLWKEQIPQIALETMAGKGTEIGRTFDELAAIIDGVTLNDKLSVTLDTC HINDAGYNVKDDFDGVLVEFDKIIGLDRLKVIHVNDSKNPMGSHKDRHANIGFGTIGFEA LNGVVHHEKLTALPKILETPYVGEDKKNKKAPYGFEIAMLKNQTFDPELLEKIQGQN >gi|237663596|gb|GG668922.1| GENE 622 624507 - 624974 430 155 aa, chain - ## HITS:1 COG:no KEGG:EF1737 NR:ns ## KEGG: EF1737 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 155 1 155 155 300 100.0 1e-80 MAQSIETVTAYIETVEPNWRIAYQQVLDVVSQNLPAGFELTMQYGMPTFVVPLSVFPEGY LNRGDEPLPFISLGATKRQVALYHMGLMGNEAVRSWFQEAYQEQVSTKLNMGKSCLRFTN PKRIPYELIGELVTKITLEEWLQQYQHYQKKKKNY >gi|237663596|gb|GG668922.1| GENE 623 624974 - 625636 572 220 aa, chain - ## HITS:1 COG:no KEGG:EF1738 NR:ns ## KEGG: EF1738 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 220 1 220 220 380 100.0 1e-104 MKSIVEKLNLTKYQQLVILNRPQGEYLSEFASAAQQLPSEPVELIFAFVKTMAEFQEIVS MVIEGQHLVENGLLYVAYPKKGNKMYPTFVHRDEIFPTLQVNEADGYIKGSTLKFNRMVS LDETFTVVGMKNVLKKLAKNQTSSAVGDYVQYLPEIEALVQTEPAAAATFAALTPGYQKE WARYVFSAKRAETRKKRQTEMLVILKEGYKTKALYQQRKK >gi|237663596|gb|GG668922.1| GENE 624 625817 - 627079 727 420 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 3 419 7 415 418 284 39 5e-75 MNSAFFEELKARGLVYQVTDEEALQKQLNEESVKLYIGFDPTADSLHIGHLLPILMLRRF QQNGHVPIALVGGGTGMIGDPSFKDAERSLNTLDTVKAWSESIKGQLSRFIDFEDEKNPA ILANNYDWLGELSLIDFLRDVGKNFTINYMMSKESVKRRIETGISYTEFAYQLLQAYDFL KLYETEGCLLQLGGSDQWGNITSGIELLRREQEVQGFGLTMPLITKADGTKFGKTEGNAV WLDAEKTSPYEFYQFWINTDDRDVVKFLKYFTFLTLDEIATIEEEFTANPGQRAAQKALA KEVTTLVHGEAAYHQAVKISEALFSGDIQSLTAEEIKQGFKDVPTYEVQPEDQLSLVDLL VTSKIEPSKRQAREDVQNGAIYVNGERRQDLAAELTETDKIEGQFTVIRRGKKKYFLLKY >gi|237663596|gb|GG668922.1| GENE 625 627291 - 629675 2473 794 aa, chain + ## HITS:1 COG:SPy0097 KEGG:ns NR:ns ## COG: SPy0097 COG0744 # Protein_GI_number: 15674320 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Streptococcus pyogenes M1 GAS # 27 774 28 768 770 712 50.0 0 MKNNSSNNKQKPTTSSGGNVFLLILNVIIRVFQSLVVFGVILIVLGGSLGLGIGMGYFAF LVEDTQPPTKEELQKEISDITEVSKMTYADGTPIANIKSDLIRTRINGDQMSPLLKKAII STEDEYFEEHHGVVPKALVRALISDATGIGGSSGGSTLTQQLVKQQILTDETTFKRKANE ILLALRIEKYFSKDEIVTTYLNVSPFGRNNKGENIAGVEEAAKGLFGKSAKDLNLPQAAF IAGLPQSPIVYTPYTNTGALKDDLSLGMKRKDFVLFSMYREKAISQKEYEEAKAYDLKKD FLPTEQANVNTEGYLYYTVLDKAVEIVMDLDMKKAKVNRDDLDQVGLDQYEEQARREIQS QGYTIQSTIDQNIYNTMQTAVANYGYLLDDGTADVNGNTMIETGNILMDNATGRILGFIG GRNFDINQNNHAFNADRQVGSTIKPISVYGPAIDQGIIGSESRLANYPTTYADGREFVNS TNVDLNQFVTVRNALNWSFNIPVVHVNNELRKKMGDDNFSYNHYLSKMNYPASDAWAYES APLGSVETNVVTQTNGFQALANKGKYQKAYMIEKITDNSGHVVYEHKDEGTQVYSPATAS IMNDLLRSVVDSANTTKFKPTLAGLNPHLASADWVGKTGTTDEFKDSWLIVSTPTVTLSS WAGHDLPAPMTMTSGDNNGNYMANLANALYYANPELFGIGQKFELDPSVIKSKVSEFTGE KPGSITYNGAKFNTPGKTTTSYYAKDGAPQSTYKFGIGGTDSNYASYWGNLAPRATTNNN NNNNKNNDNKKNNN >gi|237663596|gb|GG668922.1| GENE 626 629780 - 630781 1311 333 aa, chain - ## HITS:1 COG:SPy0514 KEGG:ns NR:ns ## COG: SPy0514 COG1609 # Protein_GI_number: 15674618 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 6 333 7 333 333 410 67.0 1e-114 MEKQTITIYDVAREANVSMATVSRVVNGNPNVKPATRKKVLEVIDRLDYRPNAVARGLAS KKTTTVGVIIPDVSNAFFASLARGIDDVATMYKYNIILANSDGDDQKEVTVLNNLLAKQV DGIIFMGHRITDDIRGEFSRSKTPVVLAGSIDPDEQVGSVNIDYTEATKDATATLAKNGN KKIAFVSGALIDPINGQNRMKGYKEALAENGLSYNEGLVFESEYKFKAGINLAERVRNSG ATAAFVTDDELAIGLLDGMLDAGVKVPEEFEIITSNNSLLTEVSRPRLSSITQPLYDIGA VSMRLLTKLMNKEEIEEKTVVLPYGIDQKGSTK >gi|237663596|gb|GG668922.1| GENE 627 630996 - 632099 1405 367 aa, chain + ## HITS:1 COG:lin1613 KEGG:ns NR:ns ## COG: lin1613 COG0006 # Protein_GI_number: 16800681 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Listeria innocua # 3 367 2 365 365 389 52.0 1e-108 MNQEKIADLKNWMHQEKIDFTYISDPGHIAYFSGYESEPHERVLALFIAADDQSFLFTPA LEVEDAEKSSWTYPVYGYLDSENPWEKIAALLNKRTQGTPRFALEKQALSLARFDQLKTY FPASDFSHDVTPLIEKLQLIKTEPEIQRLLEAGSWADVAFEIGFKAIQAGVAEQEIVAEI EYQLKRQGIRSMSFDTLVLTGKNGASPHGVPGETKIEPHDLVLFDLGVVHNGYCSDATRT VSYLEPSDFQKEIYGIVLEAQLAATEAVKPGVTAGELDDIARGVITKAGYGEYFNHRLGH GIGTTVHEYPSLVHGNDLVIEEGMCFSIEPGIYIPGKVGVRIEDCLHVTKTGSEPFTKTT KELQIIQ >gi|237663596|gb|GG668922.1| GENE 628 632220 - 632807 1105 195 aa, chain - ## HITS:1 COG:BH3244 KEGG:ns NR:ns ## COG: BH3244 COG4980 # Protein_GI_number: 15615806 # Func_class: R General function prediction only # Function: Gas vesicle protein # Organism: Bacillus halodurans # 7 130 9 136 140 62 37.0 6e-10 MAKKGGFFLGAVIGGTAAAVAALLLAPKSGKELRDDLSNQTDDLKNKAQDYTDYAVQKGT ELTEIAKQKAGVLSDQASDLAGSVKEKTKDSLDKAQGVSGDMLDNFKKQTGDLSDQFKKA ADDAQDHAEDLGEIAEDAAEDIYIDVKDSAAAAKETVSAGVDEAKETTKDVPEKAAEAKE DVKDAAKDVKKEFKG >gi|237663596|gb|GG668922.1| GENE 629 632823 - 633254 626 143 aa, chain - ## HITS:1 COG:SPy0587 KEGG:ns NR:ns ## COG: SPy0587 COG4768 # Protein_GI_number: 15674673 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain # Organism: Streptococcus pyogenes M1 GAS # 6 140 6 133 135 94 48.0 9e-20 MSGGEIAALIAAVAFVVLVIFLVLVLYKVSQVVSKIEDTIDETNTTIKVVTSDVNVLSRQ VEGLLVKSNELLTDVNQKVATIDPLFTAVADLSESVSELNTSSKHLITKVGTVGKGTAKA GLVSKVGGSAFRAMRSKNKKTNN >gi|237663596|gb|GG668922.1| GENE 630 633432 - 634328 1354 298 aa, chain - ## HITS:1 COG:SP2092 KEGG:ns NR:ns ## COG: SP2092 COG1210 # Protein_GI_number: 15901907 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 2 293 4 299 299 457 80.0 1e-128 MKVKKAVIPAAGLGTRFLPATKAMAKEMLPIVDKPTIQFIVEEALASGIEDILIVTGKAK RPIEDHFDSNVELENNLKEKNKTDLLKLVEETTDVNLHFIRQSHPKGLGHAVLQAKAFVG NEPFVVMLGDDLMEDKVPLTKQLMDDYEQTHASTIAVMKVPHEDTSKYGIINPEKEIEKG LYNVENFVEKPKPEEAPSDLAIIGRYLLTPEIFDVLENQKPGAGNEIQLTDAIDTLNKTQ RVFAREFKGERYDVGDKFGFMKTSIEYGLTHPEVKDNLREYIINLGAQLAKKEQPKEK >gi|237663596|gb|GG668922.1| GENE 631 634340 - 635362 1404 340 aa, chain - ## HITS:1 COG:L0016 KEGG:ns NR:ns ## COG: L0016 COG0240 # Protein_GI_number: 15673320 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Lactococcus lactis # 3 336 4 337 341 440 67.0 1e-123 MKQKVAVLGPGSWGTALAQVLAENGHEVCIWGNKPEQIDEINTKHTNKHYLPELILPTSI QATTDLATALVDVDAVLFVVPTKAIRSVAQEVAQHLKTKPIIIHASKGLEQGTHKRISEV IAEEIPAEKRQGIVVLSGPSHAEEVAVHDITTITAASENLADAVYVQELFMNDYFRIYTN DDVIGVETGAALKNIIALGAGAIHGLGFGDNAKAAIMTRGLAEISRLGVAMGANPLTFIG LSGVGDLIVTCTSVHSRNWRAGNLLGKGHKLDEVLENMGMIVEGVSTTKAAYELAQQLEV EMPITETIYNVLYNDEDVQQAAKEIMLRDGKTENEFTLDF >gi|237663596|gb|GG668922.1| GENE 632 635431 - 636267 829 278 aa, chain - ## HITS:1 COG:BS_lgt KEGG:ns NR:ns ## COG: BS_lgt COG0682 # Protein_GI_number: 16080552 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Bacillus subtilis # 6 270 8 266 269 250 50.0 3e-66 MMLAQVNSIAFRLFGIPVYWYAIIIVSGIALAVWLSSREAVRVGLKEDDVFDFMLWGLPA AIVGARLYYVAFQWQDYVDNPIEIFFTRNGGLAIYGGLIGGGLALFFFTRHRFISTWTFL DIAAPSVILAQAIGRWGNFMNHEAYGPATTRQFLENLHLPTFIIDNMNINGTYHQPTFLY ESVWNVLGFIVLVLLRKKPHFLKEGEVFLGYIIWYSFGRFFIEGLRMDSLYAFSNIRVSQ LLSLVMFVAAIVIVIVRRRNPNLKFYNREKQKKKITTS >gi|237663596|gb|GG668922.1| GENE 633 636282 - 637217 1013 311 aa, chain - ## HITS:1 COG:SPy0584 KEGG:ns NR:ns ## COG: SPy0584 COG1493 # Protein_GI_number: 15674671 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Streptococcus pyogenes M1 GAS # 1 308 1 306 310 369 61.0 1e-102 MTEVVKIYQLVENLSLEVVYGDEESLNRTIKTGEISRPGLELTGYFNYYSHDRLQLFGSK EITFAERMMPEERLLVMRRLCAKDTPAFIVSRGLEIPEELITAAKENGVSVLRSPISTSR LLGELSSYLDGRLAVRTSVHGVLVDVYGLGVLIQGDSGIGKSETALELIKRGHRLIADDR VDVYQQDELTVVGEPPKILQHLIEIRGIGIIDVMNLFGASAVRGFMQVQLVVYLEAWEKD KKYDRLGSDDAMVEIANVDVPQIRIPVKTGRNVAIIIEVAAMNFRAKTMGYDATKTFEER LTRLIEENSGE >gi|237663596|gb|GG668922.1| GENE 634 637427 - 638389 823 320 aa, chain + ## HITS:1 COG:CAC3468 KEGG:ns NR:ns ## COG: CAC3468 COG0322 # Protein_GI_number: 15896707 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Clostridium acetobutylicum # 5 138 3 139 373 132 48.0 1e-30 MKEYLKEKAHQLPLTPGVYLMKDATDTIIYVGKAKKLKNRVSSYFINSNQHSRKTMRLVK QIIDFDVLHTDTELDALLLECQLIQQYRPRYNRQMNAYEQYSYVSVAVNERQLEIKLLNI PTKENCFGPYSIRRKLNRLKIILDSIYDLVPTNYWHQTFQKESAIPTELFQQELFDFFHN QGREPIKRIAQQMQEAAEKQAFEKAAKLKEDWLFLTRFANQNQRISQANQRDWQLMWLPC QKKIKYYLIYQGLVVATRVVTKQTFQKYSPLELAKKIMPKKPPKTIEHYSKQQVDFLNIL YGYISRHPECHLENLTIEKA >gi|237663596|gb|GG668922.1| GENE 635 638425 - 638781 287 118 aa, chain - ## HITS:1 COG:no KEGG:EF1751 NR:ns ## KEGG: EF1751 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 118 1 118 118 154 100.0 9e-37 MTYFQRLVVNTLTFISLSVVFPGMIHVRGIMPAIIAAFVLSILNMLVKPVLTILSLPFTL LTFGLFSFVVNAAILQMTSFFVGEMNFGFSSFWAAVLMAVIMSIVNTIVTDHNLSKYE >gi|237663596|gb|GG668922.1| GENE 636 638781 - 639104 449 107 aa, chain - ## HITS:1 COG:MA4346 KEGG:ns NR:ns ## COG: MA4346 COG1983 # Protein_GI_number: 20093134 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Methanosarcina acetivorans str.C2A # 1 61 111 169 183 60 45.0 7e-10 MKRKLTKSPNNVVLTGSLAGIADWLGIDPTIIRVVYVLLSFFSAGFPGILLYIALAVLIP SGRTGSDRGYGHQNPYNRNVRNENPYAANKKQRKEAEKIDDDEWSDF >gi|237663596|gb|GG668922.1| GENE 637 639179 - 640780 2198 533 aa, chain - ## HITS:1 COG:lin2630 KEGG:ns NR:ns ## COG: lin2630 COG3595 # Protein_GI_number: 16801692 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 213 530 107 414 416 178 32.0 2e-44 MKERERVLELVKKGILTSEEALILLENMATEKDEKQIEKAAEKVDTQNIGTTNKEDQVAD LMNALEKGESEGPTVDSFEENTQDSAEKDRENLERILDELATKANRASAELDEVNAEIAG IKEEIKEVAEEIGTLDTKEELDALTEDEQVQRKDLHVLLAQLEEKLATQSTEKTALEEEL KNIRKEQWKGQWNDTKEKVSSQFSEEWKDQATDTFNQVGGKVAEVGGQVGEFLKKTFNSF SDTMNDNVEWKDIKMKVPGVATTKFEHEFNYPNPQASLIDVKVANGTVVFKTWDQEDVKV EAKIKLYGKMAGDSPMEAFLERSDIDVDDETISFQVPNKRVKADLTFYLPKRTYDHVSVK LLNGNVLVEELTAKDVYTKSTNGTIMFKKIDATMLEIEGVNGEIKVLEGTILDNIIETVN GDVSISAAPESLSVSLINGDIRITAKEKTLRRVEASSANGNIKLALPNDLGVEGQVKTNL GSINSRLTDIEVVREKKDRGNQQLHFRRVLEESMAQINASTTTGSIFLKDTDK >gi|237663596|gb|GG668922.1| GENE 638 640990 - 641667 735 225 aa, chain - ## HITS:1 COG:SP1395 KEGG:ns NR:ns ## COG: SP1395 COG0704 # Protein_GI_number: 15901249 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 217 1 217 217 234 57.0 9e-62 MLRTQFEEELLNLHNQFYEMGMMVSSAVHKSVKAYINHDKKLAQEVIDRDIEINDMEVKL EKKSFEMIALQQPVTTDLRMIITVMKASSDLERMADHAVSIAKSTIRLKGETRIPEIEKE ISDMSDYVKKMVDNVLIAYVKTDQKDARMIAQMDDRTNEYFDSIYKHAVEAMKANPETVI SGTDYLHVAQYLERIGDYVTNICEWIVYLATGKITELNSNRDEQF >gi|237663596|gb|GG668922.1| GENE 639 641682 - 642458 284 258 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 254 1 263 329 114 27 1e-23 MVRRSKMGKEIISSKDLHLYYGKKEALKGIDLTFNQGELTAMIGPSGCGKSTYLRCLNRM NDLIPDVTITGSVVYKGKDIYGPKTDNVELRKEIGMVFQQPNPFPFSVYENVIYGLRLKG VKDKQVLDEAVETSLKAAAVWEDVKDKLHKSALSLSGGQQQRVCIARVLAVEPDIILLDE PTSALDPVSSGKIENMLLTLKEKYTMIMVTHNMSQASRISDKTAFFLQGDLIEFNDTKKV FLNPKEKQTEDYISGKFG >gi|237663596|gb|GG668922.1| GENE 640 642451 - 643260 306 269 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 26 256 5 231 245 122 34 3e-26 MKEYNLNDTHLLQLDSQKDPIALHTEDLHVFYGDNEAIKGVDLQFEKNKITALIGPSGCG KSTYLRSLNRMNDGIANSRVTGKIMYKDVDVNTKEVDVYEMRKRIGMVFQRPNPFSKSIY ENITFALKQHGEKDKKKLDEIVETSLKQAALWDQVKDNLNKSALALSGGQQQRLCIARAI AMKPDILLLDEPASALDPISTGTVEETLVNLKDDYTIIIVTHNMQQAARISDYTAFFYMG KVIEYDHTRKIFTRPKIQATEDYVSGHFG >gi|237663596|gb|GG668922.1| GENE 641 643277 - 644161 1021 294 aa, chain - ## HITS:1 COG:SPy1243 KEGG:ns NR:ns ## COG: SPy1243 COG0581 # Protein_GI_number: 15675203 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 294 1 294 295 407 72.0 1e-113 MNAKKADKIATGILYAVSGVIVLILAALLIYILARGIPHISWEFLTQPSRAYQVGGGIGI QLFNSLYLLLITMIISIPISLGAGIYLSEYAKKNWLTDLIRTSIEILSSLPSVVVGLFGF LIFVVQIGYGFSILSGALALTFFNLPLLTRNVEESLKAIHYTQREAGLALGLSRWETVKK VILPEALPGILTGVILSSGRIFGEAAALIYTAGQSAPALDFSNWNPLSVSSPISIFRQAE TLAVHIWKINTEGTMPDGAAVSAGASAVLILVVLLFNFGARFIGNRLYKRMTSA >gi|237663596|gb|GG668922.1| GENE 642 644161 - 645081 1053 306 aa, chain - ## HITS:1 COG:SPy1244 KEGG:ns NR:ns ## COG: SPy1244 COG0573 # Protein_GI_number: 15675204 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 2 301 4 303 311 376 74.0 1e-104 MEDVQKKLLTKSKRAKMEQRGKFISFLCIALIVAVVVSIFYFVASKGLATFFKDKINVFD FLFGTNWNPSDIGADGKPMVGALPMIAGSFIVTFLSAIVATPFAIGAAVFMTEISPKKGA KFLQPVIELLVGIPSVVYGFIGLSVIVPFVRSIFGGTGFGILAGTFVLFVMILPTVTTMT VDALKAVPRHYREASLALGATRWQTIYKVVLRAAVPGILTAVVFGMARAFGEALAIQMVI GNAAVMPTSLTTPASTLTSILTMGIGNTIMGTVENNVLWSLALILLLMSLLFNIVIRIIG KRGALK >gi|237663596|gb|GG668922.1| GENE 643 645204 - 646058 1118 284 aa, chain - ## HITS:1 COG:SP1400 KEGG:ns NR:ns ## COG: SP1400 COG0226 # Protein_GI_number: 15901254 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 1 282 1 285 292 322 56.0 6e-88 MKKRLLLFIGLASILTLTGCAKWIDRGESITAVGSSALQPLVETASEEYQSQNPGRFINV QGGGSGTGLSQVQSGAVDIGNSDLFAEEKKGIKAEDLIDHKVAVVGITPIVNKNVGVKDI SMENLKKIFLGEVTNWKELGGKDQKIVILNRAAGSGTRATFEKWVLGDKTAIRAQEQDSS GMVRSIVSDTPGAISYTAFSYVTDEVATLSIDGVQPTDENVMNNKWIIWSYEHMYTRKNP SDLTKEFLDFMLSDDIQERVIGQLGYIPVSKMEIERDWQGNVIK >gi|237663596|gb|GG668922.1| GENE 644 646234 - 647118 933 294 aa, chain - ## HITS:1 COG:L2 KEGG:ns NR:ns ## COG: L2 COG2177 # Protein_GI_number: 15672955 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Lactococcus lactis # 1 294 1 311 311 310 50.0 2e-84 MIRTFFSHLFESIKSLKRNGWMTVASASAVTITLVLVGIFMGVIFNATKLADDIEKNVTV SVFVDIGTKQNEMKTLEKQLKGLDNVEDISYSNKDQQLKKIQEQMGDAWNLFEGDSNPLY DVYYVRAKTPEDTKDIAKQAAKFPSVFKADYGGVNSDKIFKIAQTVRTWGLAAAALLLFV AVFLISNTIRITILSRQKEIQIMRLVGAKNSFIRWPFFLEGAWIGLIGAIVPVIIMTLGY HQVYNMFNPQLLRSNYSLIRPEDFIWKVNLLMIATGMIIGSLGSVISMRRFLKI >gi|237663596|gb|GG668922.1| GENE 645 647111 - 647797 357 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 215 4 219 223 142 36 4e-32 MIEMKDVMKKYSNGTTAIRNISVEIDQGEFVYVVGPSGAGKSTFIRLMYREEKATKGNLT VAGHDLMKIKNKEVPYLRREIGIVFQDYKLLPKKTVYENVAYAMQVIGRRPREIKKRVME VLDLVGLKHKVRVFPSELSGGEQQRVSIARAIVNTPKVLIADEPTGNLDPENSWEIMKLL DRINAQGTTVVMATHNSTIVNTIRHRVIAIENGRIIRDQVEGEYGYDD >gi|237663596|gb|GG668922.1| GENE 646 647903 - 648886 989 327 aa, chain - ## HITS:1 COG:lin2653 KEGG:ns NR:ns ## COG: lin2653 COG1186 # Protein_GI_number: 16801714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Listeria innocua # 1 326 1 326 327 454 71.0 1e-127 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEEIDELTVMFELQQEEYDAEIQEELE ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN YETGNVQAVMDGDLDGFIDAYLKQRLS >gi|237663596|gb|GG668922.1| GENE 647 648930 - 649004 64 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENPEIRTLLDEMTQKITSFRRSL >gi|237663596|gb|GG668922.1| GENE 648 649081 - 651618 3018 845 aa, chain - ## HITS:1 COG:SPy1805 KEGG:ns NR:ns ## COG: SPy1805 COG0653 # Protein_GI_number: 15675639 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Streptococcus pyogenes M1 GAS # 1 845 1 837 839 1102 68.0 0 MANFLKKMIENDKKELRRLEKIADKIDAHASAMEQLSDEQLREKTDEFKARYQKGETLDE LLPEAFAVVREAAKRVLGLFPYRVQLMGGIVLHDGNIPEMRTGEGKTLTATMPVYLNALS GEGVHVVTVNEYLATRDSNEMGELYNFLGLSVGLNINSKSSDEKREAYNCDITYSTNNEL GFDYLRDNMVVYRSQMVQRPLNYAIVDEVDSILIDEARTPLIISGQAEKSTALYTRADNF VKRLKEDEDYKIDIQSKTIGLTEAGIEKAEQTFGLDNLYDIENTALTHHLDQALRANYIM LLDIDYVVQDNKVLIVDQFTGRIMDGRRYSDGLHQAIEAKEGVEIEDETKTMATITFQNY FRMYKKLAGMTGTAKTEEEEFREIYNIQVIQIPTNRPIIRDDRPDLLYPTLESKFNAVVE DIKERYHKGQPVLVGTVAVETSELLSDKLNAAKIPHEVLNAKNHFKEAEIIMNAGQKGAV TIATNMAGRGTDIKLGLGVLELGGLAVIGTERHESRRIDNQLRGRAGRQGDPGVSQFYLS LEDDLMKRFGSERIKTFLERMNVQEEDAVIQSKMFTRQVESAQKRVEGNNYDTRKNVLQY DDVMREQREVIYAQRQEVIMEENDLSDVLMGMVKRTIGRVVDSHTQLEKEEWNLDGIVDF AASTLVHEDTISKKDLENKSAEEIKDYLVARAQEVFEEKSQQLNGQEQLLEFEKVVILRV VDTKWTDHIDAMDQLRQSVGLRAYGQNNPLVEYQTEGYSMYNNMVGSIEYEVTRLFMKSE IRQNVQREQVAQGQAEHPETEQDAAAQSNTSAKRQPVRVDKKVGRNDLCPCGSGKKFKNC HGRNA >gi|237663596|gb|GG668922.1| GENE 649 651874 - 652425 669 183 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116333275|ref|YP_794802.1| ribosome-associated protein Y (PSrp-1) [Lactobacillus brevis ATCC 367] # 1 183 1 183 186 262 69 2e-68 MFRYNVRGENIEVTEAIRDYVEKKVGKLERYFSDSPEATVHVNLKVYTEKTAKVEVTIPL PYLVLRAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRETGRNNTKAAVFLVGEETE ETPSELDIVRTKRLSLKPMDSEEAVLQMNMLGHNFFIFEDAETNGTSIVYRRKDGKYGLI ETD >gi|237663596|gb|GG668922.1| GENE 650 652564 - 653199 325 211 aa, chain - ## HITS:1 COG:L0319 KEGG:ns NR:ns ## COG: L0319 COG1040 # Protein_GI_number: 15673071 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Lactococcus lactis # 13 211 30 216 216 128 38.0 9e-30 MLLRFNKWMSPSLCQHCQAKFQKLPMTGTCFGCSRVSQERYCFDCQRWQLLYPEYSFHNA ALFHYDEGMQEWMERYKFQGDYRLRMCFNEEINFYFQQQSADYIIPVPLSEKRMQERGFN QVIGLLEAADVPYSPFLIRKEENVPQSKKTRKERMQLQQPFAIQKENQKKLKKCSVILVD DIYTTGRTLFHAAAVINDCYPKSLNTFTLAR >gi|237663596|gb|GG668922.1| GENE 651 653240 - 654556 629 438 aa, chain - ## HITS:1 COG:lin2657 KEGG:ns NR:ns ## COG: lin2657 COG4098 # Protein_GI_number: 16801718 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) # Organism: Listeria innocua # 58 436 57 438 439 317 43.0 3e-86 MEDLHGRKIIIEETERSIQTKLVYLPTMLERSPLTIQCQRCGEVVSKKENRLATNVYYCH ACIQLGRVTSCQKFCHLPERPNSPRTVFFEWSGQLTKGQQAISVELCETAKARENRLVWA VTGAGKTEMLFAVLHQTLQEGGRIALASPRVDVCLELFPRIQAVFPHEAIALLHGNSQES YRYTKLVICTTHQLLKFHQAFDLLIVDEVDSFPFVNNEHLYYGVRNARKKRSSLVYLTAT PTKELRKLLQQKKLAASILPARYHRRPLPVPRRFWVQSWQRLSSKNIKIIAHHLKRLLVR NSVLLFCPSISLIHQLHALIAERFSDKEVVAVYGSDELRLEKVQAMRQQKTDILITTTIL ERGVTFDAVSVIVYGANHRVFTSSTLVQIAGRVDRRQEFNYGEVLFLHDGETRDMKEAIR QIKQMNRLASKRGMLDGL >gi|237663596|gb|GG668922.1| GENE 652 654828 - 655544 421 238 aa, chain + ## HITS:1 COG:MA0995 KEGG:ns NR:ns ## COG: MA0995 COG3910 # Protein_GI_number: 20089872 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Methanosarcina acetivorans str.C2A # 23 236 31 250 251 199 47.0 5e-51 MENIFLKRLEFKAFEEDSVFSKIEGLNKFNSLNFKKPITFFSGENGTGKSTLLEAIAVNW GFNPEGGSINFNFSTKDTHLDLHNYLTVGKSVKRATDGFFLRAESFYNVATYAENIDLDF SEYGDKSLHHQSHGESFLNLVNHRFRGNGLYLLDEPEAALSPQRQLALMISIKKLIDEGS QFIIVSHSPILLAMPDSQIISFDKDSPLEITYEESMPYEITSLFLNNKNRILSHLFAE >gi|237663596|gb|GG668922.1| GENE 653 655868 - 656203 455 111 aa, chain - ## HITS:1 COG:lin2831 KEGG:ns NR:ns ## COG: lin2831 COG1440 # Protein_GI_number: 16801891 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 4 104 2 100 101 115 63.0 2e-26 MSKKTIMLVCSAGMSTSLLVTKMQKAAFNQGLDAHIFAASASEAETNLENNPVDVLLLGP QVRYMKSDFEKRLSPKGIPTDVISTSDYGLMNGEKVLEQALGLLAQADKKE >gi|237663596|gb|GG668922.1| GENE 654 656324 - 656611 333 95 aa, chain - ## HITS:1 COG:no KEGG:EF1770 NR:ns ## KEGG: EF1770 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 95 1 95 95 177 100.0 1e-43 MVHTRQKKYDTITHYLKTNGGSQVTLTFTQFDELLFPHSGLPKTAKTDVDWWANDYKHPE KGAYGWLNASYQVVQVNLEKEYVVFNKLLKSAWYV >gi|237663596|gb|GG668922.1| GENE 655 656753 - 657415 704 220 aa, chain + ## HITS:1 COG:L98095 KEGG:ns NR:ns ## COG: L98095 COG1739 # Protein_GI_number: 15673073 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 6 210 3 207 209 223 53.0 3e-58 MLESYITVKQDGFSEIEIKKSRFICSVKRVTSEEEAKAFIAAIKKEHWKANHNCSAFVIG EKNDIQRSSDDGEPSGTAGVPMLEVLKKKELINVVAVVTRYFGGIKLGTGGLIRAYSHAL SHTLDEIGLVIGKLQQELLITIAYPLLGKAQAFLEHSPYTLKETIYTESIQLICLVDEQA TETFIAEMTDLLNGQLTIEKGATSYHELPFNEKGAQANDI >gi|237663596|gb|GG668922.1| GENE 656 657405 - 657638 428 77 aa, chain + ## HITS:1 COG:no KEGG:EF1772 NR:ns ## KEGG: EF1772 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 77 1 77 77 148 100.0 7e-35 MTFEEVLPQIKAGKKAVRKGWSGFELFIELRDEIGTSEGEFLQVTPYFLIKTSDEGYSMF SPTPCDVLAEDWVIVEA >gi|237663596|gb|GG668922.1| GENE 657 657723 - 658487 247 254 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 249 4 238 242 99 30 2e-19 MPKEFETKRVLVTGAASGIGQAQAIAFAEQGAEVIGIDLDETGLKQTAALVDPDSAKSFT YFVGDVSSPSFVQATMKQIVKNNGQIDILLNTAGILDDYRPSLETSEALWDQILATNLKS VFLVTNAILPYFLQQKKGVIVNMASIAGLVAGGGGAAYTASKHAIIGYTKQLSYDYAKLG IRANAIAPGAIQTPMNAADFAGEGEMAAWVARETPAGRWAQPQEVAKLSLFLASDDADYI HGTVMTIDGGWTMK >gi|237663596|gb|GG668922.1| GENE 658 658633 - 659136 431 167 aa, chain + ## HITS:1 COG:lin0860 KEGG:ns NR:ns ## COG: lin0860 COG4708 # Protein_GI_number: 16799934 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 21 164 10 154 162 91 40.0 8e-19 MNHSSNPQTSTWSATALAKMALVTALYVVVTVLLAPLSFGPIQLRLAELFNYLGVFNKRY IWSITLGVAIANTASPLGIIDIVIGSAGTCAVLWIAYFATKNQQNLLIKLMLTAILFALS MFTVAGPLTFFYQLPFWYTWLTVGLGELLSMTVGGILIYVLNKKYSL >gi|237663596|gb|GG668922.1| GENE 659 659454 - 660188 457 244 aa, chain - ## HITS:1 COG:no KEGG:EF1775 NR:ns ## KEGG: EF1775 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 244 1 244 244 476 100.0 1e-133 MRKLILVFVGCAMAFCLWPNQAAAVAGGYGGGRVESPSGGNPSNGFSPSGDGSRSYVHHN ETGTSNTTPLEGLISTVFFVLFGGTMIWQRRRRNQPVDEGAFQEMWAALPGTSKEKKALL KEIQQTFLEIQQAWDQENLSVVKDNYTEKLYQKHLAVLQANQQVGIRNHVKKVKVAPASN YHHISETSFSLMLHFSCIDYEEDTQSGRVLSGYKHQKQYFSQLWYFDYNPSLGKWQADFI QPKG >gi|237663596|gb|GG668922.1| GENE 660 660209 - 660538 319 109 aa, chain - ## HITS:1 COG:no KEGG:EF1776 NR:ns ## KEGG: EF1776 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 109 1 109 109 195 100.0 5e-49 MRNKQIEKVSQGLFIVTSVLAVCLLLLSAVVYPDLPAHVPIHVNFWGEGNSFGPRSSIFM WPAVLFGLSIYQRSYQSVQPYGRWLKVLLIIVNLGALFSILRLFIHLLI >gi|237663596|gb|GG668922.1| GENE 661 660667 - 661914 1416 415 aa, chain - ## HITS:1 COG:BH0634 KEGG:ns NR:ns ## COG: BH0634 COG0151 # Protein_GI_number: 15613197 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Bacillus halodurans # 1 414 1 417 428 435 55.0 1e-122 MNILVIGRGGREHAIAKKLQQEDKVKTVYCAPGNPGMSGDNIRTVPIGEEQQTELIQFAK DNQIDWTFVGPETPLIEGIVDAFQAAGLLIFGPTKAAAIIEGSKSFAKDFMQKYQIPTAE YRVFRRLAPALEYIEQQGVPIVIKADGLAAGKGVVVAETKAAAKRALVAMMEDQQFGASG QTVVIEEFLQGEEFSLMAFVSNEKVYPMVIAQDHKRIFDGDAGPNTGGMGAYTPVPQVPE EAVQQAISQVLKPTAKGMVAEKRPFQGILYAGLIQTATGPKVIEFNARFGDPETQVVLAR LESPLSEIISSLLVKEQPTIAWNELASVGVVVAAEGYPNQYKTNLPLPEMSGATIYYAGV TRSEQALVSAGGRIFLAEATASTLEEARKKVYQTLDNYSFPGMYYRKDIGVKGLI >gi|237663596|gb|GG668922.1| GENE 662 661933 - 662082 203 49 aa, chain - ## HITS:1 COG:SA0925 KEGG:ns NR:ns ## COG: SA0925 COG0138 # Protein_GI_number: 15926659 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Staphylococcus aureus N315 # 1 49 445 493 493 83 79.0 1e-16 MADSVEYAAQHGIQAIIQPGGSIKDQASIDLANHYGIAMIFTGTRHFKH >gi|237663596|gb|GG668922.1| GENE 663 662354 - 663568 1338 404 aa, chain - ## HITS:1 COG:SP0050 KEGG:ns NR:ns ## COG: SP0050 COG0138 # Protein_GI_number: 15899995 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Streptococcus pneumoniae TIGR4 # 1 404 1 408 515 511 65.0 1e-145 MTKRALISVSDKTGVTTFAAGLVANGFEIISTGGTRTVLEEAGVPTLAIDDITGFPEMLD GRVKTLHPNIHGGLLAKRGNQAHQKALTEQGIHFIDLVVVNLYPFKETILKPAISEAEAI EMIDIGGPSMLRSAAKNYQDVTAVVDPSDYEQVLSEISSTGTSQLATRKRLAAKVFRHTA AYDALIADYLTTQVGETEPEKQTLTYERKQTLRYGENSHQQATFYQSVVPVSLSIASARQ LHGKELSYNNIRDADAALRIASEFTEPTVVAVKHMNPCGIGTGKTILAAYRQAFEADPVS IFGGIVVLNRPVDQATAAEMHQIFLEIIIAPSFEEEALALLSQKKNLRLLTLDFHAQEKK AVELVSVMGGLLIQEQDTVVENDQAWQVVTERQPTPAERDALNF >gi|237663596|gb|GG668922.1| GENE 664 663565 - 664137 320 190 aa, chain - ## HITS:1 COG:BS_purN KEGG:ns NR:ns ## COG: BS_purN COG0299 # Protein_GI_number: 16077719 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Bacillus subtilis # 2 185 3 186 195 210 49.0 1e-54 MKIAVFASGNGSNFEAIAAAFSQKKIAGHLSLVFCDQPEAYVLTRAQKRKIPVVCFSPSD FSSRGQYEEQVLKHLKEHQIDLIVLAGYLRIIGKTLLEAYPKRIVNIHPSLLPSFPGLHG IEEAFHYGVKITGITIHYVDSGVDTGPIIFQTTTKIDTEDTVDTLAEKIHALEHEWYPKI ISQIVKETMK >gi|237663596|gb|GG668922.1| GENE 665 664134 - 665165 764 343 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 [Marinobacter algicola DG893] # 5 320 10 320 354 298 49 2e-79 MENAYSKAGVNVEAGYEVVERIQKHSQKTQRTGTLGMLGGFGGCFDLSSYKLKEPVLVSG TDGVGTKLLLAIEEQKHETIGIDCVAMCVNDVVAQGAEPLYFLDYLALGTVNPAKVEAIV AGVAAGCCEANAALIGGETAEMPDMYEADAYDVAGFAVGIAEKSQLLTPSNVKEGDFLIG LPSSGLHSNGYSLVRNIFFKKHSFKTTDKLPELAPKTLGEELLTPTKIYVKELLPLLKAG LVHGAAHITGGGFLENLPRMFSSALAAEIQLNSWPVLPIFKLIQKYGEIPPEEMYEIFNM GLGMILAVSPEHVEKVQELLPEAFEIGRLVPRKTKAVIFKEAL >gi|237663596|gb|GG668922.1| GENE 666 665167 - 666606 1334 479 aa, chain - ## HITS:1 COG:SPy0026 KEGG:ns NR:ns ## COG: SPy0026 COG0034 # Protein_GI_number: 15674270 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Streptococcus pyogenes M1 GAS # 1 476 1 476 484 705 70.0 0 MSYEAKSLNEECGIFGIWGHPDAAQVTYFGLHSLQHRGQEGAGIVANNSGKLDGHRDLGL LAEVFQKQEQLNALEGTAAIGHVRYATAGTGSVDNIQPFLFKFYDSQIGLAHNGNLTNAK RLRKQLEREGAIFHSNSDTEILMHLIRKSTAASFLDKLKESLNLVKGGFAYLLLTETMMI AALDPNGFRPLSIGQMNNGAYVVASETCALETVGARFIQDVAPGEVVIISDEGLKIEVFT TEVQPAICAMEYIYFARPDSNIAGVNVHTARKRMGKNLAIESPVAADMVIGVPNSSLSAA SGYAEEAQIPYELGLVKNQYVARTFIQPTQELREQGVRMKLSAVRGVVKGKKVILVDDSI VRGTTIRRIIHLLKEAEAQEVHVRIASPPLKYPCFYGIDIQTRDELIAANYSIEEIKEQI GADSLAFLSEAGLIDGIQLNYDAPYSGLCMAYFNGDYPTPLYDYEEQYQASLKKETRRN >gi|237663596|gb|GG668922.1| GENE 667 666582 - 668057 1471 491 aa, chain - ## HITS:1 COG:L173921 KEGG:ns NR:ns ## COG: L173921 COG0046 # Protein_GI_number: 15673512 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Lactococcus lactis # 1 488 251 739 739 630 64.0 1e-180 MEKLLLEACLDLIKNHQDILIGIQDMGAAGLVSSSAEMASKAGSGLILELDKVPQRETQM SPYEMLLSESQERMLICVEKGAEQQVCELFQTYDLEAVAIGSVTDDGQYRVFHGGKIVAD VPVDALAEEAPVYQKAYQEPERMRAFKKLAPFIPEITNSTELLKRLLQQPTIASKKSVYE TYDSQVQTNTVVQPGSDAAVLRVRGTNKALAMTTDCNSRYLYLNPEIGGQIAVAEAARNI VASGAQPLAITDCLNYGSPDKPESFWELWTSADGIAAACRQLGTPVISGNVSLYNETDGQ AIYPTPMIGMVGVIEDVSQITTQAFKQVDDLIYLIGETHADFNGSEIQKIQLGRIEGQLR SFDLKEEKANQELVLKAIQVGLVASAHDCAEGGVAVALAESAFANELGLQVTLPLKKEYL FAETQSRFILSVSPQHQEAFETLIGRKAQHIGKVTETGLVIHALDDVINCSTKEAKALWE DAIPCLMKQKA >gi|237663596|gb|GG668922.1| GENE 668 668256 - 668858 610 200 aa, chain - ## HITS:1 COG:BH0629 KEGG:ns NR:ns ## COG: BH0629 COG0046 # Protein_GI_number: 15613192 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Bacillus halodurans # 4 197 6 199 743 323 75.0 1e-88 MMNEPTPKEIKETRLYAEWGLTDEEYHQIETILQREPNYTETGLFSVMWSEHCSYKNSKP VLKKFPTEGPQVLQGPGEGAGIVDIGDGLAVVFKAESHNHPSAVEPYEGAATGVGGIIRD IFSMGARPIALLDSLRFGELTDARTRYLFQEVVAGISGYGNCIGIPTVGGEIAFEPCYQG NPLVNAMCVGLIRHDEMLAS >gi|237663596|gb|GG668922.1| GENE 669 668855 - 669529 544 224 aa, chain - ## HITS:1 COG:L176360 KEGG:ns NR:ns ## COG: L176360 COG0047 # Protein_GI_number: 15673513 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain # Organism: Lactococcus lactis # 1 218 1 220 223 302 66.0 3e-82 MKLAVIVFPGSNCDADLLWAVKEVMGIDAEFVRHDATSLAKFDGVLLPGGFSYGDYLRCG AIARFSPIINEVIRFATEGKMVFGTCNGFQILTEIGLLPGTLLRNDSLRFICKSVPLKVN THTKFTSEYPENVSIHLPVAHGEGNYYCDEKTLKELKEKNQIVFTYQEKVNGSLANIAGI CNEQGNVLGMMPHPERAMEELLGSTDGRSFFASIIKNFGKELSQ >gi|237663596|gb|GG668922.1| GENE 670 669530 - 669781 359 83 aa, chain - ## HITS:1 COG:BH0627 KEGG:ns NR:ns ## COG: BH0627 COG1828 # Protein_GI_number: 15613190 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component # Organism: Bacillus halodurans # 1 77 1 78 84 79 53.0 2e-15 MYFVKVYVTYKESILDPQGEAVKEAVHRLGFTEVAEIRVGKYFEMHVQQTEAIEEKIEQI CDQLLANVNMESYRFEILSLEEI >gi|237663596|gb|GG668922.1| GENE 671 669795 - 670508 592 237 aa, chain - ## HITS:1 COG:BS_purC KEGG:ns NR:ns ## COG: BS_purC COG0152 # Protein_GI_number: 16077713 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Bacillus subtilis # 3 233 5 235 241 261 57.0 6e-70 MEKKALVYTGKAKKLYQTENAAVLFVEYLDQATALNGQKKDKVLGKGALNNQITSLIFEH LQQQKIPNHFIKKVSEHEQLIQVVEMIPLEVVVRNYAAGSFSKRLAIEEGTKLVTPIIEF YYKEDRLDDPFINEDHIQFLKVATPAEIVEIKALALQINQALSQLFQRLNICLIDFKIEI GRTKANQLLLADEISPDTCRLWDLNTNEHLDKDVYRRELGEIVPVYEEVLQRLLTAN >gi|237663596|gb|GG668922.1| GENE 672 670660 - 671784 959 374 aa, chain - ## HITS:1 COG:lin1886 KEGG:ns NR:ns ## COG: lin1886 COG0026 # Protein_GI_number: 16800952 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Listeria innocua # 18 371 19 373 374 380 52.0 1e-105 MNKPLKVGATIGIIGGGQLGRMLVMSGKKMGFQMIVLDPTLNSPAGQVADRQIVAAFDQI SALTELAELSDVITYEFENIEVASLEKAIPLEKLPQGTELLKITQNRLLEKTFLQSIGCK IAPFAEVKSQKELPQAIEKIGFPCVLKTIQGGYDGKGQVVLKCEEDFSQATKLLANATCE LEKWVPFTKELSIIVAGNKHGYQSFPVSENIHRKNILHESIVPARISENVQQKAAELAQY IAEELNLSGVLAIEMFLTDSEELYVNELAPRPHNSGHYSIEACSFSQFDAHIRGISNWGI GLPQLLQSVVMVNLLGEHLEKSYQLCTSKPTWQVHYYGKAESKVGRKMGHVTITTPCLSE TLKEIETVGIWNVT >gi|237663596|gb|GG668922.1| GENE 673 671777 - 672265 513 162 aa, chain - ## HITS:1 COG:BS_purE KEGG:ns NR:ns ## COG: BS_purE COG0041 # Protein_GI_number: 16077710 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Bacillus subtilis # 1 161 1 161 162 219 70.0 1e-57 MKPLVAVIMGSTSDWATMKAACLVLEELKIPYEKRVISAHRTPDLMFRFAEESRTKGLKV IIAGAGGAAHLPGMVAAKTTLPVIGVPVKTRTLNGIDSLLSIVQMPGGVPVATTAIGSAG ATNAGLLAAEILSIDDLQLAERIQARRQSLEKAVMESGEQLE >gi|237663596|gb|GG668922.1| GENE 674 672438 - 673304 1113 288 aa, chain - ## HITS:1 COG:Cgl2775 KEGG:ns NR:ns ## COG: Cgl2775 COG0330 # Protein_GI_number: 19554025 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Corynebacterium glutamicum # 19 286 46 323 325 232 42.0 6e-61 MEEKKTFYMSGYVGIASLLVILIAGIGLFIYGASHTNGVLVVLGIILLVGAILFLSSLTI VSPNQAKAILFFGRYLGTIKENGLFITIPFTQKMNISLKVRNFNSSLLKVNDSDGNPIEI SAVIVFRVVDTAKALFNVDYYQDFVEIQSETAIRHVATQYPYDTFSDNDVTLRGNTEQIS EELTKELQERLAVAGVEVIETRLNHLAYATEIASSMLQRQQAKAILAARQTIVEGAVSMT QMALEQIEEGQEINFTDERKVQLINNLLVSIITDKGTQPVINTGDVSS >gi|237663596|gb|GG668922.1| GENE 675 673454 - 674329 333 291 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90022317|ref|YP_528144.1| ribosomal protein S15 [Saccharophagus degradans 2-40] # 13 248 239 475 500 132 35 2e-29 MRYLSKDILEEVITQRPSDSYKSNFGRVVLIGGNRQYGGAIIMSTEACINSGAGLTTVIT DVKNHGPLHARCPEAMVVGFEETVLLTNVVEQADVILIGPGLGLDATAQQILKMVLAQHQ KQQWLIIDGSAITLFSQGNFSLTYPEKVVFTPHQMEWQRLSHLPIEQQTLANNQRQQAKL GSTIVLKSHRTTIFHAGEPFQNTGGNPGMATGGTGDTLAGIIAGFLAQFKPTIETIAGAV YLHSLIGDDLAKTDYVVLPTKISQALPTYMKKYAQPHTAPDSELLEQKRSR >gi|237663596|gb|GG668922.1| GENE 676 674427 - 676067 1646 546 aa, chain - ## HITS:1 COG:lin0200 KEGG:ns NR:ns ## COG: lin0200 COG4166 # Protein_GI_number: 16799277 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Listeria innocua # 1 545 1 549 549 474 46.0 1e-133 MKKYLKITMVCILLVGFLAGCTNKNENKKKQKNTKEAVQLMSPSELTTLNTSVLLDFPDA IVQTAAFEGLYSLDEQDQLVPAVAKALPMISEDGKTYTISLRKEAVWSNDDPVTAHDFEY AWKKMIDPKNGFVYSFLIVETIQNGAEISAGKLAPNELGVTAVDDYTLKVTLKEPKPYFT SLLAFPTFFPQNQKVVEQFGADYGTASDKVVYNGPFVVKDWQQTKMDWQLAKNNRYWDHQ NVRSDIINYTVIKETSTALNLFEDGQLDVATLSGELAQQNKNNTLYHSYPTATMNYLRLN QKRKGQATPLANENLRKALALGIDKENLVNNIIADGSKALHGAITEGFVANPTTGLDFRQ EAGNLMVYNKEKAQSYWKKAQAELGEKVNVELMVTDDGSYKKIGESLQGSLQELFPGLTI ELTALPTEAALNFGRESDYDLFLIYWTPDYQDPISTLMTLYKGNDRNYQNPVYDKLLDEA ATTYALEPEKRWATLIAAEKEVIETTAGMIPLSQNEQTVLQNDKVKGLNFHTFGAPLTLK NVYKEK >gi|237663596|gb|GG668922.1| GENE 677 676130 - 676450 415 106 aa, chain - ## HITS:1 COG:no KEGG:EF1792 NR:ns ## KEGG: EF1792 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 27 106 1 80 80 152 100.0 3e-36 MLIKSAESEEMTIFFDKENQPNAQVQMGIITLQPGEKRPLAGYARHEQDEYSYVISGEAH TILEDGQDLVGKAGQAQLIEAGEGHINYNNGLEPAVVVWMLVERTK >gi|237663596|gb|GG668922.1| GENE 678 676584 - 677603 1060 339 aa, chain - ## HITS:1 COG:lin0977 KEGG:ns NR:ns ## COG: lin0977 COG0115 # Protein_GI_number: 16800046 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Listeria innocua # 5 339 4 338 339 542 75.0 1e-154 MEKANLDWNNLGFSYIKTPFRYISYWRDGKWEEGTLTDNNQLTISEGSPALHYGQQCFEG LKAYQCADGSVNLFRPDENAKRLQKSCARLLMPQVPVETFVSACQEVVKANLAYLPPYGT GGTLYLRPYMIGVGDNIGVAPAKEYIFSIFCVPVGSYFKNGLAPTNFIVSEYDRAAGRGT GAAKVGGNYAASLLPGAEAHEKEFSDCIYLDPYTHTKIEEVGAANFFGITKDGTFITPKS ASILPSITKYSLLTLAKERLGMTALEGDVYIDRLADFSEAGACGTAAIISPIGGIQNGTD FHVFYSETEVGPVTKQLYDELVGIQFGDKEAPEGWIVKV >gi|237663596|gb|GG668922.1| GENE 679 677794 - 678246 708 150 aa, chain - ## HITS:1 COG:BS_ydaT KEGG:ns NR:ns ## COG: BS_ydaT COG4876 # Protein_GI_number: 16077505 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 143 1 143 150 96 40.0 2e-20 MPWNMNDYPTSMKNLAPLIRKKAIDIGNALLADGYPDDRAIPIAISQAEKWYQEASAADK KAFEQEANPTKQDSHKQDKHAGKLLTAAVNVKYKDGQWLVISDSAEKASNTFTHKQEAIE RAQEIARNKQTKLKIYKQDGTLQETKEYTE >gi|237663596|gb|GG668922.1| GENE 680 678467 - 679036 671 189 aa, chain + ## HITS:1 COG:no KEGG:EF1796 NR:ns ## KEGG: EF1796 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 189 15 203 203 283 100.0 2e-75 MKMSKVLTTVLTATAALVLLSACSSDKKTDSSSSSKETANSSTEVVSGASISAKPEELEM ALSDKGNWIVAATDNVTFDKEVTVAGTFHDKGKDSNDVYRKLALYSQDDNKKVTAEYEIT VPKLIVSSENFNIVHGTVKGDIEVKANGFTLNGTKVNGNITFDKQEYKDSADLEKDGATV TGEVTVANN >gi|237663596|gb|GG668922.1| GENE 681 679083 - 679727 535 214 aa, chain - ## HITS:1 COG:no KEGG:EF1797 NR:ns ## KEGG: EF1797 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 214 1 214 214 400 100.0 1e-110 MQFLKKYGGYFLVLGVLLDFFTPYYVGFKDQGYNQLTEVISLLGDVNSPVRENFNRLTII AGMLMLASLPRIYAIFSRKTKKGAWLVVAMIGAYGLFDCIFSGLFSVDTSSAGTVAAALH NGGSAVGYTGFLLLSGVLTIIYSKYGSQKNKNLFGFLFILCMLAAGLYGLARIPQLQQVK PFNYLGLWQRVSSFCNYLPMLALCLQTKTNDKFD >gi|237663596|gb|GG668922.1| GENE 682 679848 - 680999 931 383 aa, chain - ## HITS:1 COG:SP0873 KEGG:ns NR:ns ## COG: SP0873 COG0628 # Protein_GI_number: 15900756 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Streptococcus pneumoniae TIGR4 # 26 382 15 364 369 96 27.0 7e-20 MKKYNVDWNYWVVRFLFVMALIVGYLLITNYQHFVHSVSGLLGILSPFITGFVIAYLLSG SQKKIEGLLKIPLPVVKKAKHGLSVLLLYLIILFIFVLTLNYIVPLLISNLVDLANSLPT FYDHMVQFVMSLEDKGILKTAAIEKYLNSVLKDLSPERFLNQWTQALFSLGTLTKNVSSF FLNAFLTLIISIYALVFKQSILTFVEKAAHKLLSEKVYKQTQTWLSTTNKIFYKFISCQF LDACIIGVSSTILLSILNVKFAVTLGILLGICNMIPYFGSIFASIVAGVITLFTGGVTQA ITVLLVLLILQQIDGNIIGPRIMGDALNVNPILIIVSITIGGAYFGVLGMFLAVPVAAII KIIVSEWLNESKENDKIVDSIES >gi|237663596|gb|GG668922.1| GENE 683 681240 - 684635 3874 1131 aa, chain - ## HITS:1 COG:no KEGG:EF1800 NR:ns ## KEGG: EF1800 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 1131 194 1324 1324 2160 99.0 0 MANGDKIPTEAGHVGVRLWYDKKIVNYDYFKNGPVDSIPEIVPEVTQIAPVKVFTKIGVA PKLPKQVKVTYNTGKEANEAVRWNEIDPDAYKEPGTFEVDGTLENTNIKAKASIVVAKDN EAEKGDKISSADLTAVVDPQFPRIIRYEDPQSNQVIFNGQHEKIDQVMIDGKAYKATAEK QKSEANQAVYNVAVPEIGLRFTTTLTVSEGQELAMKLSDIREEGTKIHTISIPNQGLISV NSTDEGATFAGVVMNTGTNANNGNKNGDTIQDLTTTSQEETKKYMYGFLNTANYAASFWT NAYGDGSVDGSDNNRIHKQTKEAATGFVTTLSSGAWTYRPFDAPEDYTTGETPEVKVKFS KDSNDDNRVDWQDAAIGFRSIMNNPMGAEKVPELVNQRIPFNFASQATNPFLVTLDESKR IYNLTDGLGQMNLLKGYQNEGHDSAHPDYGAIGQRPGGEQALNQLIDEGHKLNAVFGVHI NDTESYPEAKGFNEELVDPTKRGWDWLDPSYFIKQRPDTLSGRRYERFKELKQKAPNLDY IYVDVWGNQGESGWASRQLSKEINSLGWFTTNEFPNALEYDSVWNHWSAEKDYGGTTTKG FNSTIVRFIRNHQKDTWIISDNPLLGGAEFEAYEGWVGKTNFNTYRQKTFAINVPTKFLQ HYQITNWETTTAADGQIYGTIKLANGAEKVTVTQADANSPRSITLNETEVLKGDAYLLPW NVNGQDKLYHWNPKGGTSTWSLDKKMQGKTNLHLYELTDQGRIDKGAIATTNNQVTIQAE ANTPYVIAEPDSIEPMTFGTGTPFKDPGFNEANTLKNNWKVFRGDGEVKKDANGDYVFSS EKERTEIKQDINLPKPGKYSLYLNTETHDRKATVTVKIGGKKYTRTVNNSVAQNYIQADI NHTSRKNPQYMQNMRIDFEIPDNAKKGSVTLAVDKGNSVTKFDDLRIVERQTDIMNPDKQ TVIKQDFEDTQAVGLYPFVKGSAGGVEDPRIHLSERNEPYTQYGWNGNLVSDVLEGNWSL KAHKQGAGLMLQTIPQNIKFEPNKKYTVQFDYQTDGENVFTAGTINGELKNNNDFKPVGE LTSTAADGQTKHYEAEIIGDASGNTTFGIFTTGADKDFIMDNFTVTVESKK >gi|237663596|gb|GG668922.1| GENE 684 684656 - 685213 462 185 aa, chain - ## HITS:1 COG:no KEGG:EF1800 NR:ns ## KEGG: EF1800 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 178 1 178 1324 313 99.0 2e-84 MKHGKIKRFSTLTLLASATILVPLSTSAEETTNSSTETSSSMVEPTATEEKLWQSDFPGG KTGEWQDVIGKTNRELAGESLAISRDAAAGNNAVSLNLDSPKLADGEVETKFKYTAGSGR TGVIIRGNTKDSWVFVGYNANGKWLVESPNSWNDSISGPTLNEDTNYLLKVRYVGEKLLS GLTPR >gi|237663596|gb|GG668922.1| GENE 685 685363 - 685770 528 135 aa, chain - ## HITS:1 COG:SP0064 KEGG:ns NR:ns ## COG: SP0064 COG2893 # Protein_GI_number: 15900009 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 1 135 1 134 134 170 64.0 7e-43 MSEHLVLVSHGRFCEELKKSAEMIMGPQETISTVALLPEEGEADFLEKFEAITESLEDFV VFADLLGGTPCNILSKKIMQGASFDLYTGMNLPMVISYVNASLLAIEGDYVKESAESIVK VNELLLNVAVDDEDE >gi|237663596|gb|GG668922.1| GENE 686 685790 - 686599 957 269 aa, chain - ## HITS:1 COG:SP0063 KEGG:ns NR:ns ## COG: SP0063 COG3716 # Protein_GI_number: 15900008 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Streptococcus pneumoniae TIGR4 # 1 265 1 265 271 351 64.0 1e-96 MTKSNYKLTKEDFKQINRRSLFTFQLGWNYERMQGSGYLYTILPQLRKIYGDDTPELKEV MKTHTQFFNTSNFFNTIITGIDLAIEEKEGIAGKQTVSGLKTGLMGPFAAIGDSIFAALI PTIFGALAANMAINGNPTGIFIWIVAQIAVMVFRWKQLEFAYREGISLVTTMQHRLTALT DAATLLGVFMVGALVATMVNVKLSWAPSIGDVTLNMQNNLDMILPRLLPAGIVGGVYWML GKKNMTSTKAIFIVLIVCVALSALGVISK >gi|237663596|gb|GG668922.1| GENE 687 686586 - 687485 1254 299 aa, chain - ## HITS:1 COG:SP0062 KEGG:ns NR:ns ## COG: SP0062 COG3715 # Protein_GI_number: 15900007 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Streptococcus pneumoniae TIGR4 # 3 298 2 300 301 288 52.0 9e-78 MNILWWQILLLTLYAGYQILDELQIYSSLSAPVFAGLFAGLVMGDIKAGLIIGGSMQLTV LGVGTFGGASKIDANSGTILATAFSVSLGMNPEQAIAAIAVPVASLMIQLDILARFANTY FAHRIDKMVEDMNYKGIERNFLMGALPWSLSRMIPVFLALAFGGGLVQKVVSVLNGDLKW LGDGLSVAGAVLPAVGFAILLRYLPVKKHFPYLILGFTVTALLGTIFTNMQLLGTSVASV VKDFSGVFNALPMLAVALIGFALAAISYKNGQMIPSGPAAKKEHAANDSDEGEIEDDEI >gi|237663596|gb|GG668922.1| GENE 688 687499 - 687978 538 159 aa, chain - ## HITS:1 COG:SP0061 KEGG:ns NR:ns ## COG: SP0061 COG3444 # Protein_GI_number: 15900006 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 1 157 1 157 158 226 75.0 2e-59 MSIIGVRIDGRLIHGQVANLWATKLNISRIMVVDDEVAGNAIEKSGLKLATPAGVKLSVL PVEKAAQNILAGKYDSQRLLIVVRKPDRLLKLVELGVPIKEINVGNMSQTNETRSITKSI NVVDQDIEVFKELNAKGVHLIAQMVPSDKAEDFMSLITK >gi|237663596|gb|GG668922.1| GENE 689 687975 - 689759 1760 594 aa, chain - ## HITS:1 COG:SP0060 KEGG:ns NR:ns ## COG: SP0060 COG1874 # Protein_GI_number: 15900005 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 1 590 1 591 595 844 67.0 0 MDRFEIKEEFLLNGQSFKILSGAIHYFRVDPSDWHHSLYNLKALGFNTVETYVPWNLHEP QKGTFHFEGILDLERFLKLAQELGLYAIVRPSPYICAEWEFGGFPAWLLNEPGRMRSNNP TYLKHVAEYYDVLMEKIVPHQLANGGNILMIQIENEYGSFGEEKAYLRAIRDLMIARGVT APFFTSDGPWRATLRAGSMIEDDILVTGNFGSKAKENFGMMQAFFEEHGKKWPLMCMEFW DGWFNRWKEPIIKRDPQELAESVREALALGSINLYMFHGGTNFGFMNGCSARGTIDLPQI TSYDYDAPLDEQGNPTEKYFALQKMLHEEYPALPQAEPLVKESFAQTAIPLTNKVSLFAT LETISQPVVSVYPQTMEQLGQNTGYLLYRTSIEKDAAEEKLRVIDGRDRLQLFVNQVHQA TQYQTEIGEDIYVTLPQENNQIDILMENMGRVNYGHKLFADTQKKGIRTGVMADLHFMTQ WQQYCLPMTSCEQVDYSREWQPDQPSFYQYHVELAEVKDTFIDVSKFGKGIVFVNQTNLG RFWNVGPTLSLYIPKGLLKEGQNEIVIFETEGTYQPEIQLVKEPLYKEMKEGLQ >gi|237663596|gb|GG668922.1| GENE 690 689822 - 690763 938 313 aa, chain - ## HITS:1 COG:SA1995 KEGG:ns NR:ns ## COG: SA1995 COG1105 # Protein_GI_number: 15927773 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Staphylococcus aureus N315 # 1 311 1 310 310 305 50.0 7e-83 MIVTVTMNPSIDISYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLG GFHGAFIANELKKANIPQAFTSIKEETRDSIAILHEGNQTEILEAGPTVSPEEISNFLEN FDQLIKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDSLRQVLQGPWKPY LIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRV KIPTIQAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAGMANAQERMTGHVDVENVK KHLMNIQVVEIAK >gi|237663596|gb|GG668922.1| GENE 691 690779 - 691810 1276 343 aa, chain - ## HITS:1 COG:SA1994 KEGG:ns NR:ns ## COG: SA1994 COG3684 # Protein_GI_number: 15927772 # Func_class: G Carbohydrate transport and metabolism # Function: Tagatose-1,6-bisphosphate aldolase # Organism: Staphylococcus aureus N315 # 20 337 7 325 326 402 63.0 1e-112 MTINNTTFGGGTMLTLTAGKKAAMDRLSTQEGIISALAIDQRGALKKMIKALDVEPTDAQ IETFKELVSKELTPYASAILLDPEYGLPAAKARDTEAGLLLAYEKTGYDATTPGRLPDLL ADWSVLRLKEEGADAIKFLLYYDVDEDPEINHQKHVFIERLGSECAEEDLPFYLELVSYD AQIADATSLEYAKVKPHKVNEMMKEFSKPQYKVDVLKVEVPVNMNFVEGFAPAETAYTKE EAANYFLEQSQATDLPFIFLSAGVSTELFQETLRFAKEAGSTFNGVLCGRATWKNGVKPF VEAGETAACDWLKTEGRENIESLNEVIAATASSWHAKVQVNEG >gi|237663596|gb|GG668922.1| GENE 692 691797 - 692969 1348 390 aa, chain - ## HITS:1 COG:SPy0716 KEGG:ns NR:ns ## COG: SPy0716 COG2222 # Protein_GI_number: 15674774 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Streptococcus pyogenes M1 GAS # 1 389 1 389 399 443 56.0 1e-124 MFTAEKEELEQLGAEITTREIRQQPELWQETVTLYHENQTALENFLKEVQAKAQGKRTRV IFTGAGTSQYVGDTVVPYLRAHGDTQAFSFESIGTTDIVAKPEDYLIKDEPTLLVSFARS GNSPESLAAVEVANQVVETIHHLAITCAEEGQLAQISQKEENSFLFLMPTRSNDGGFAMT GSFSCMTLGTLLLFDQTAFEQKQDYVTALIKLGEEVLSREEELNEIVNLDFERIVYVGSG SLAGLTREAQLKILELTAGKVATIFDSSMGFRHGPKSFINEKTIMFGFVNNTPYTRDYDL DILEEVHGDEIAAGVFAIAQPGKRNFSGSTIEYSAETALLPDGYLALADIMVAQTVALLT SIKVGNKPDTPSPTGTVNRVVKGVTIYDYK >gi|237663596|gb|GG668922.1| GENE 693 692981 - 693712 624 243 aa, chain - ## HITS:1 COG:SPy0715 KEGG:ns NR:ns ## COG: SPy0715 COG2188 # Protein_GI_number: 15674773 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 6 242 3 239 240 229 52.0 4e-60 MENAFKNKALYHQLVDLLQERIETCMIPHDKLPSERELTAQYGVSRTTVRLALQELENRG SIYRRHGKGTFVSDIKKEAADLAGAYSFTEQMKGLGRKPHTRILSFEKLEADKFICQHLN LSLGEAVFKLSRLRIADNEPLMVEDTYLPVKFFLSLTDQLLRSKPLYDLFSEDFKQTVRL ADEELYASIASKEDAKLLMIPEGAPVLHLARQTYNMKNEIIEFTLSVARADQFHYQIRHI RNS >gi|237663596|gb|GG668922.1| GENE 694 694034 - 694165 66 43 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315036698|gb|EFT48630.1| ## NR: gi|315036698|gb|EFT48630.1| hypothetical protein HMPREF9501_00532 [Enterococcus faecalis TX0027] # 1 43 48 90 90 73 93.0 3e-12 MSTHSINIYLIRKLVEGLNMLNNEYCHGFRKISYLLVVARTKQ >gi|237663596|gb|GG668922.1| GENE 695 694098 - 695000 676 300 aa, chain - ## HITS:1 COG:BS_gspA KEGG:ns NR:ns ## COG: BS_gspA COG1442 # Protein_GI_number: 16080894 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Bacillus subtilis # 1 291 1 275 286 235 41.0 1e-61 MENRKELAIVSCCNTNFVPHLAAMFVSILENSPSAAAVHFYVIDDNINFESKQLLYFTIK HTQINAELTFLKINPHFFKNVVTSERIPKTAYYRIAIPELFRGSQIERLLYMDCDMIALD DVAKLWTVDLGENIIAAVEDAGFHQRLEKMAIPAESMCYFNSGLLLIDVKKWLNLDVTTK VLRFIEENPDKLRFHDQDALNAVLHDRWTLLHPKWNAQGYILSKAKKHPTIYGEKQYEET RRAPSIIHFTGHVKPWTKEFQWYTKRYYDQYANRTAFRCVNTFNQYLSYTKISRRIEYAQ >gi|237663596|gb|GG668922.1| GENE 696 694990 - 695835 810 281 aa, chain - ## HITS:1 COG:BS_gspA KEGG:ns NR:ns ## COG: BS_gspA COG1442 # Protein_GI_number: 16080894 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Bacillus subtilis # 1 272 1 271 286 214 41.0 1e-55 MRKNQKIVPIVTASDENYAPYLNVMMTTVLENCHAERPVHFYVIDDGLSLSSKKALRETV SSNSQNATVEFLTADKEVYQNFLVSDHITTTAYLRISLPSLLQKYSYKKVLYLDADTLVL DDIVQLYDTPLVNQTIGAVIDPGQAYALKRLGIHSSDYYFNSGVMIIDIDRWNEKAITQK TIQYLEENGDRIVYHDQDALNAVLYEDWLALEPRWNMQTSLVFNRHEAPNEAYQKLYTAG NQEPAIIHFTGHDKPWNTLENHPYTALYLNKLKKVGARNGK >gi|237663596|gb|GG668922.1| GENE 697 696336 - 698396 1766 686 aa, chain - ## HITS:1 COG:lin0927 KEGG:ns NR:ns ## COG: lin0927 COG1368 # Protein_GI_number: 16799998 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Listeria innocua # 4 647 12 643 653 548 45.0 1e-155 MKKINNRLGLFLFFVLLFWAKTILAYYLDFSLGVKGSLQREILWFNPVATTLLLFGFSLY FKKHKTFMLSLTLLNVLNTLILYLNIIFYREFTDFITIQSVFGFSKVSEGISGDLLALMR VHDVFYWLDTLVLLVLVFYSFKQRRNHQVFVTKPINRRLAISISCLSVLLFSVNLFLSET DRPQLLQRIFDRNYIVKYLGLDAFTAIDGVKTAMSNEVRAEASSNELPEIMKFTKQNNLP LNPQYAGIAKGKNVFVIHLESFQQFLINMKVQGQEVTPFLNQLYQNKATISFDNFFHEVG QGKTSDAENMLETGTFGLPQGSLFTQLGSDNTFEAAPAVLGQKGYTTAVFHGNVGSFWNR DHVYKNLGYQYFFDRSYFSKDDKMLGYGILDKQLLRESASELEHLQQPFYAKFLTVTNHT PYYTDDQNFPFPKLNTGNSIVDDYVRTAHYLDQSLEQFFHYLQTTSLYNHSIFVIYGDHF GISDANNKDLCKAFNRDPKTWTNYDNAQLQRVPLMFYMPGYTQGKIMHEYGGEIDVLPTL YHLLGVDDKNYIHFGTDLLSPQYKQVVPFRNGDFVTPQFSYLGGEIYNNQGKKLDQVPAD LKAEVTKDNDWVKKSLSLSDKLNQENLLRFYKPQGFQEVQPKDYNYDVAFEKNKVLEVEK QKNAQSTSLFSQNGNQTTVQNYPTTP >gi|237663596|gb|GG668922.1| GENE 698 698438 - 699826 1054 462 aa, chain - ## HITS:1 COG:mll2542 KEGG:ns NR:ns ## COG: mll2542 COG0477 # Protein_GI_number: 13472297 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 14 421 14 421 505 209 32.0 7e-54 MIDRKKVILYTCCMSLFVVTMDVTVVNVALPSIQSDFHTNLSTLQWVTDGYTLMVASLLL LSGSTADRIGRKRVLQLGLACFGLASFLCGISQTPGQLIAFRMLQGIGGSMLNPVAMSII TQVFTEKLERAKAIGLWGSVTGISLGMGPIIGGLIVSYFSWRYVFFVNVPIIAAAIILTQ KFVPESKVEKTVKNDFVGQALMILFLFSSIYSIIGLPRKGLFAPDILSTGIIGCLAIVIF FIYEYNIDNPLINPRFFLSIPFTSASFLAIFGFIIYNGYLFLNTLYLQEMRGFSPLEAGL STIPLAFVSFLVAPRAGEMVGRIGTKRPIMLCGISMLAVSFLQLFVTKTTPMIILFIIYI FLGIGFGMLNSPITITAIEGMPLSQSGTAAAIAVTCKQIGNSLGVALPSLLITKPITSSL TRTPFTNVWLLFGCCAIAIIFLSYLSNSPLAKKSLRRVRFYF >gi|237663596|gb|GG668922.1| GENE 699 700208 - 701062 711 284 aa, chain - ## HITS:1 COG:BS_yclA KEGG:ns NR:ns ## COG: BS_yclA COG0583 # Protein_GI_number: 16077430 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 1 227 1 238 290 69 26.0 5e-12 MTIEKLEYFYTIAKYNSISKAASELHVSKSTLSASLKDLESELGHLLFNRNGNSLTLNSY GDKIVQSVYIILNEAKKMKLNLHEMIENPVMRLGFGNTSLMYKVTENEDQLNRFWECYHG SSFELLNKLENHELDFVITSADVNSPVLKKEQLIELKMYLCVSREIKQEIEEEGFSCLTN YPFLFLPHHLDHLEATKSVLEMLQLTSPLVCCYDTLMLTRLIEKSKGVYAVISLRKEQLQ EIDSKLFFLPIERKQKFYLYRNVSSSVFVQPGQIKATLQKLLET >gi|237663596|gb|GG668922.1| GENE 700 701454 - 702284 610 276 aa, chain + ## HITS:1 COG:PH1607 KEGG:ns NR:ns ## COG: PH1607 COG1235 # Protein_GI_number: 14591382 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Pyrococcus horikoshii # 1 272 1 245 249 63 26.0 6e-10 MKINYLGTGAAERIPGIFCNCKLCKYAREKKGREIRTQTQLIIDDVLLIDFPGDSYLHLL QYDLCFADFDSLLISHWHSDHFYGEDLAYRMSGYALDIPNRLTVYGNEAVKTFYQRAFDL EGRQDDTRLHYQVIQPYKCFTIANYTIYPLPAQHGNFSEDCFIFVIDDGKDAFLSTHDTG YFTSEMFEYLEKSHLLLSIVSLDCTSQTNETGNSHMNWEENLKLIAELKERKLVTDKTIY VANHFSHNGGLSYAEMAALSQKHEIITSYDGLEILT >gi|237663596|gb|GG668922.1| GENE 701 702432 - 703286 881 284 aa, chain - ## HITS:1 COG:SA0901 KEGG:ns NR:ns ## COG: SA0901 COG3591 # Protein_GI_number: 15926635 # Func_class: E Amino acid transport and metabolism # Function: V8-like Glu-specific endopeptidase # Organism: Staphylococcus aureus N315 # 43 272 64 280 342 80 27.0 3e-15 MKKFSIRKISAGFLFLILVTLIAGFSLSANAEEYIVPAESHSRQKRSLLDPEDRRQEVAD TTEAPFASIGRIISPASKPGYISLGTGFVVGTNTIVTNNHVAESFKNAKVLNPNAKEDAW FYPGRDGSATPFGKFKVIDVAFSPNADIAVVTVGKQNDRPDGPELGEILTPFVLKKFESS DTHVTISGYPGEKNHTQWSHENDLFTSNFTDLENPLLFYDIDTTGGQSGSPIYNDQVEVV GVHSNGGIKQTGNHGQRLNEVNYNFIVNRVNEEENKRLSAVPAA >gi|237663596|gb|GG668922.1| GENE 702 703335 - 704864 1493 509 aa, chain - ## HITS:1 COG:BS_nprE KEGG:ns NR:ns ## COG: BS_nprE COG3227 # Protein_GI_number: 16078534 # Func_class: E Amino acid transport and metabolism # Function: Zinc metalloprotease (elastase) # Organism: Bacillus subtilis # 56 490 75 521 521 176 31.0 8e-44 MKGNKILYILGTGIFVGSSCLFSSLFVAAEEQVYSESEVSTVLSKLEKEAISEAAAEQYT VVDRKEDAWGMKHLKLEKQTEGVTVDSDNVIIHLDRNGAVTSVTGNPVDQVVKIQSVDAI GEEGVKKIIASDNPETKDLVFLAIDKRVNNEGQLFYKVRVTSSPTGDPVSLVYKVNATDG TIMEKQDLTEHVGSEVTLKNSFQVAFNVPVEKSNTGIALHGTDNTGVYHAVVDGKNNYSI IQAPSLVALNQNAVDAYTHGKFVKTYYEDHFQRHSIDDRGMPILSVVDEQHPDAYDNAFW DGKAMRYGETSTPTGKTYASSLDVVGHEMTHGVTEHTAGLEYLGQSGALNESYSDLMGYI ISGASNPEIGADTQSVDRKTGIRNLQTPSKHGQPETMAQYDDRARYKGTPYYDQGGVHYN SGIINRIGYTIIQNLGIEKAQTIFYSSLVNYLTPKAQFSDARDAMLAAAKVQYGDEAASV VSAAFNSAGIGAKEDIQVNQPSESVLVNE >gi|237663596|gb|GG668922.1| GENE 703 705131 - 706429 825 432 aa, chain - ## HITS:1 COG:SP0527 KEGG:ns NR:ns ## COG: SP0527 COG2972 # Protein_GI_number: 15900441 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Streptococcus pneumoniae TIGR4 # 186 423 187 430 446 90 28.0 8e-18 MILSLLATNVLLVSSFIVFVFLRVTLIKIECKIPLLSLLIVINLCSFAALMLGYSWLIYA LTVVIFTGFLLIHKKRFSIFKAIFLSVFTLLMVSFINYTEQTILSVFFQQIYQNKLLWIA SNVLLLLINIWIALKIPNSVFLRLNRVLENSRIFFGCLLLLLILLLLFVFLISPEISPDF MRGFVTVNSSKLELLISVGLFLILIGLVIEAYLEEQRINTQLLNNLTIYTEKIESINEEL AMFRHDYKNLLYSLQIAISYEDILEIKRIYEETIAPTKKIIDNEEFELMKLNRLKNMELK ALISMKINTAKQAKLKVIVDVPEVFILDTSIDLVVVIRLLAILLDNAIENSAKSELKMFA ISIFNKNETQEFVITNSVQAEFDFKVMKKTKFSSKSNPEEHGWGLLYVKEIVDFSDQFDL QTSFNEGAELAS >gi|237663596|gb|GG668922.1| GENE 704 706426 - 707154 312 242 aa, chain - ## HITS:1 COG:no KEGG:EF1821 NR:ns ## KEGG: EF1821 # Name: agrBfs # Def: agrBfs protein # Organism: E.faecalis # Pathway: Two-component system [PATH:efa02020] # 1 242 1 242 242 445 100.0 1e-124 MLIDWILKNIMDMDQEDQSGKTQWTKYYLTVYFSGLFNLLMILILSVLFGTLSETFIVYV VLIFLRPVAGGWHAKTKWLCRLESIVIYVAIPFVLKNSSVSLPFIYKILLMCLLVVLFYW YAPQGTAIEPVQPSDLNVLKKQSLIRVCLLILCSLFVKEKIASVILYGLVIQGLMILPVT KNLIEGSVFMKFGKKIIKNVIEKRVAKVSDGVGTKPRLNQNSPNIFGQWMGQTEKPKKNI EK >gi|237663596|gb|GG668922.1| GENE 705 707243 - 707974 522 243 aa, chain - ## HITS:1 COG:SPy0245 KEGG:ns NR:ns ## COG: SPy0245 COG3279 # Protein_GI_number: 15674427 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Streptococcus pyogenes M1 GAS # 1 241 2 239 246 119 30.0 5e-27 MAIYILEDQIIQAKALEVLLTNILHSRNIYNETIHLFSRSDELLQVAHQDAQLNIFFLDI QMNNHIQAGFEVAKEIRKTDSESLIVFISTHTELVLTSYKYMVSALQFIQKNVDFLDFQK EVETCVDAYIQQKENIKTKSEYIIINLKASSIKMDINDIYFFQTEYDHRVSMVGKNFKRE FYGTLSKIEQLHPDLIRVHQSIIINKKYASKLNYKTHLLTMRDGTEVPVSRRYYTQVKAL FLT >gi|237663596|gb|GG668922.1| GENE 706 708393 - 710351 1942 652 aa, chain - ## HITS:1 COG:SA2437_1 KEGG:ns NR:ns ## COG: SA2437_1 COG1705 # Protein_GI_number: 15928230 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Staphylococcus aureus N315 # 338 507 310 478 502 156 52.0 1e-37 MKRKKIKNQLLVLTSILVLLSLEVAPVVTLAAELPSSSLQTALSSETTITSEEKVTETTE TTVATSTTSTSSSSSESSSSTDTTTESTSQSTTETTTTNTSSETKKEPTEPTVSSEITQP VEQSQPPQVPVTKQEPEEPIQVPEANNNFVEENQAVSLNPSLKVDEIASSNLKGYELPLL SSFGEKKRAVVVAEALRHVGKTKKEFNLTEQALTSSFLAQKIYQQLFKIDIGSTPQEQMT FGKVRSIEEAEPGDLIFWQTAEGKTLQNGVYLGQGKYLIAAAESDSKEKPEVIAQLENIY TAKQQPDSKEEKRLVVTNPFKEFILTEYGKEVLATYGASFEMQKSEQTTAFIKKIGETAR ELGEKYDVFASVMIAQAILESGSGESQLAKEPYYNLFGVKGSFQGNSVSFSTKEADQRGQ LYTISAGFRDYGGYNDSLQDYVQLLRQGIDGNQDFYKPAWRSEAKNYLQATRFLTGKYAT DKQYDNKLNSLIAVYNLTQFDLPKTVDGLIIQSKNKLSEAEQQQMHFPVYDGINYNRSGS YPVGQCTWYVYNRFKQLGTSVDEFMGNGSDWGRKGRALGYQVSSLPKAGRAISFQPGVAG ADNQYGHVAFVEAVTSDGIIISESNVINDQTISYRVLPNVIAYSSGVTYIGA >gi|237663596|gb|GG668922.1| GENE 707 710433 - 716033 5739 1866 aa, chain - ## HITS:1 COG:SSO3022 KEGG:ns NR:ns ## COG: SSO3022 COG1501 # Protein_GI_number: 15899728 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Sulfolobus solfataricus # 486 754 405 667 731 157 34.0 2e-37 MNKEYQGKKIYGKKHWLTFLLVSSSVLAFHSFVTMDSQVVDAQEQTAKEDVADSATSVGA IVSIEKAEKNFVITYASGKKAQISILNDHLFRYHLDPTGKFEEYPTPNDPKHVAKITAKT MADYGTQAFEQTNVTDSGNQFILENNGLKIMFEKESALMKVLDKKKNQVILEETAPLSFK NDKATQTLKQSSQENYFGGGTQNGRFTHKGTAIQIVNTNNWVDGGVASPNPFYWSTAGYG VVRNTWKPGNYDFGSHDPQKTTTTHEGTDFDAFYFFNDSSAGILKDYYELTGKPALMPEY GFYEAHLNAYNRDYWVKVAEGTAGAVKFEDGNFYKEYQPGDLGNLNGTLESLNGEKENYQ FSARAVIDRYKKNDMPLGWFLPNDGYGAGYGQTDSLDGDVQNLKEFTEYAQANGVEVGLW TQSNLHPADPKNPKKGERDIAKEVSVAGVKALKTDVAWVGYGYSFGLNGVEDAANVFVKE TDGAVRPMIVSLDGWAGTQRHAGIWTGDQTGGQWEYIRFHIPTYIGTSLSGQPNVGSDMD GIFGGKNKEINIRDFQWKTFTPVQLNMDGWGSNPKTPFAFDQEATDLNRAYLKLKSMMMP YNYSIAKESVDGLPMVRAMALEFPNEGTAYTKDSQYQYMWGPNLLVAPIYNGNQDEAGNS IRDGIYLPDEKQVWVDLFTGEKYQGGRVLNGVKTPLWKVPVFVKDGSIIPMTNPNNNPKE IQRDQRSFLIYPNGTTSFNMYEDDGISTSYEAGQSATTKINSQGPKSNEKGDLTVTIEPT KGSYKDFVDERSTTLDLLASEAPESVTAMVGGTEVTLKQAANKEEFLAGTNLYYFDKEFQ VNQYLSEASGEKLNQSALSVKLAKQSVTAKDVQITVKGFINKGTVDGGNTTVDDQLTIPA NVAINEEKTTPSSLTLQWDQVTEATSYEVERDGTVFGNIQTNTATFDGFSFLSEHTFRVR AVGKNGVSEWSEPIKGKTQDDPYKETINQVKATSNLPEQPGAELKKLTDKDLSTGWHTNW STGIANPSDGNFLSLKFDLGAEYQMDKIEYLPRDNAGNGNILQLQYRTSKDGANWTEFSE PINWKQDALTKTIETKDQAYRFVEMKVLKSVGNFGSGREMLFYKQPGTEGILHGDITNDG TIDENDAMSYRNYTGLESVDSDFNGYVEKGDLNKNGVIDAYDISYVLRQLDGGIEIPDVE EIAGGLSLAVVNENGKDTYLPGDTLTFILKGQDLKNINALSTKMSFDSSKFELVGQPATT NNTQQMENYSKYRKHSNDVENLYLVLSNQGNKQLLNGSMDLVTFKVKVKETTRVKRATTV EQPLQFDMSQGLLVGQGFQQATLSDFSVTVKPTELVDKELLQALITLNQARVEKEYTPET WAIFKPILDEAVAVLANEQATQTDVSAAAENLEKAASQLEKMPDVANKADLEKAIQEGLA KKPSDGQEFTEETKKVLEESLAAAQKVFAQEKVTQEEIDQATKTLREAIAQLKEQPVAVD KETLKEQIAQARGRKPEEGYQFTKETEKQLQEAIQAAEAIVAKETATKEEVSEALNALET AMAQLKEVPLVNKDQLQEVVKRAQQVTPSEGHQFTASSLQELQKALLAAKNTLKNPAANQ KMIDEAVAELTSAIDGLQEEVLVTDKKALEAMIAKAKAIKPSAGKEFTSESKARLTEAID QAEGILADKNARQEQIDIAEKNVKTALDSLEEQVLQTDKTKLKELLQKAETLKPKAGKQF TKASQEALAEAIKQAKALVEDPNATQEAVDKCLSILSQAIEAMAEEPISSNSTGNNGNHS TVSGTGGVTSQGKGTATGGTTTKTTTSGTLPKANEVVSPIWSISGFLLIVSIGLGKLFFK NKKEQN >gi|237663596|gb|GG668922.1| GENE 708 716140 - 716223 62 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFSFNILLKGCVYEGVTETDFLTVSVN >gi|237663596|gb|GG668922.1| GENE 709 716564 - 716950 218 128 aa, chain - ## HITS:1 COG:no KEGG:EF1825 NR:ns ## KEGG: EF1825 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 128 1 128 128 209 100.0 2e-53 MFANLTLRERRLLKQAQVGATISFILLFVPILTIILLHTSDLLAKWLGIVGVIMVLPLLY FAWQILKIAYKDQKDNPTPPLWVPKVYGIGLSINPYHRFGKLIFILLAVLIVGIIISLLF TPASQINH >gi|237663596|gb|GG668922.1| GENE 710 717007 - 718023 1319 338 aa, chain - ## HITS:1 COG:SA0562 KEGG:ns NR:ns ## COG: SA0562 COG1064 # Protein_GI_number: 15926283 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Staphylococcus aureus N315 # 3 336 2 336 336 435 68.0 1e-122 MYKAIVAAKGKTTKIVEKESRPLKDNEARLKMEVCGVCHTDLHVKNADFGDVSGCTLGHE GIGIVTEVGKDVTSLKIGDRASVAWFYEGCGHCEYCTSGRETLCRSVKNAGYTVDGAMAE ECIVTDGYAVKVPENLASEPASSITCAGVTTYKAIKESGIRPGQWLMISGLGGLGNLALQ YAKHVFNAKVVAVDVNDNQLAFAKEMGADLLINPVKDPDFAAQLQKEIGGVHAAVVTAVA KSAFNGAVDAVRAGGTVVAVGLPVETMDLSIPRLVLDGIHVVGSLVGTRQDLREAFQFGA EGKVVPVCQTRQPEEINAIFEEMEQGKIRGRMVIDFRS >gi|237663596|gb|GG668922.1| GENE 711 718538 - 719518 832 326 aa, chain + ## HITS:1 COG:CAC0774 KEGG:ns NR:ns ## COG: CAC0774 COG1641 # Protein_GI_number: 15894061 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 4 317 108 414 420 200 38.0 3e-51 MNDRFVCSLIEKSDLSNFVKKHSKNVFYDIAKAEAAVHQQTIDTIHFHEVGAIDSIVDIV GFFILWEQLEIEQVYSTPITDGSGTITIAHGVMPIPVPAVMELRKETNLIIQQDFEIKTE LVTPTGLAIFKELSPLFVAPEQRLIEKIGYGFGKRETGKFNALRGSIFTETHSKKKRTEH HDQVLKIETNIDNQTPEQLGYVMDLLLEHGALDVFFTPIHMKKNRSAILLTVLTTTEEKE YFTELLFKHTSTIGMRFQTMERSVMDRSFKILETPFGKVHIKKNHYHGLLKESIEYQDCE RIAKQYNFTIEEVYRLVQTLNNKTID >gi|237663596|gb|GG668922.1| GENE 712 719533 - 720243 810 236 aa, chain + ## HITS:1 COG:L0015 KEGG:ns NR:ns ## COG: L0015 COG0580 # Protein_GI_number: 15673226 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Lactococcus lactis # 4 236 7 242 245 148 36.0 7e-36 MFHHILSEFMGTALMIVFGVGVHCDDVLKRTKYAGSGHMFAITTWAFGISVVLFVFGGVC INPAMALAQAILGMIPWSYFIPYVIAEMLGGICGAVIVYIMYADHFKLSADSVDPIAIRN IFSTNPNQRNLPRNYFVETFATFIFLTSILAIAHSYETQLPIAVGLLVWAIGMGLGGTTG FAMNQARDLGPRIAYQLLPIKNKTNNDWQYGLIVPGTAPFLGAIFATLFVKFFLKF >gi|237663596|gb|GG668922.1| GENE 713 720447 - 721289 969 280 aa, chain - ## HITS:1 COG:CAC1460 KEGG:ns NR:ns ## COG: CAC1460 COG3716 # Protein_GI_number: 15894739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Clostridium acetobutylicum # 4 280 1 277 277 320 56.0 1e-87 MEELKANKLDQKTLKHSFHLWFWGALTCFSQQHMQTFGYLSSMLPIIKKLYPKHEDQVKA IQAYTAFFNTNPMLGTVIVGVTASMEEARASKNEIDGETINDMRAGLMGPIAGIGDSLVD GTLIPILLGISLGMSTGGSPIGAIFYIIVWTLISYFGQRFLYFRGYHFGDKAVSFLVGKE GAAVRVAIGVIGSMVVGGVLASWVNVTTSLKLIGADGKVFLKLQDKIDSIYPGLLTILVT LFCWWLMSKKHVSAIWTMLILVVISLVGVLLGVFNPGLTY >gi|237663596|gb|GG668922.1| GENE 714 721291 - 722142 752 283 aa, chain - ## HITS:1 COG:CAC1459 KEGG:ns NR:ns ## COG: CAC1459 COG3715 # Protein_GI_number: 15894738 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Clostridium acetobutylicum # 1 283 1 281 281 281 57.0 7e-76 MTINWIQAAILGLFACLCSNSCMAGQAVGNYTIGRPLVGGLVCGIILGDLKLGIACGVAM QLVYIALVTPGGTVSADVRAISYIGIPLAMVAISTKGLDPLGGSAADLAKSVGTLVGTIG TVLFYSVAALNLVWQSFGWKDIKKGKLDHLYAINFGWPWISHLLFSFLPTVILTYFGATA VTAMRDALPMDGLAMKTLFTVGGMLPCVGIAILLRQIVNKNIDFVPFFVGFTLAASLKLN LVSITIIALLFAVIFYKIALIKNNTKLVDSTGSLTNDDEEEDI >gi|237663596|gb|GG668922.1| GENE 715 722176 - 722673 559 165 aa, chain - ## HITS:1 COG:CAC1458 KEGG:ns NR:ns ## COG: CAC1458 COG3444 # Protein_GI_number: 15894737 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Clostridium acetobutylicum # 1 165 1 163 164 193 58.0 1e-49 MSISFVRIDDRMIHGLITLRWTKEMPCDGIIAVNDKAASNPILKEAYKAAAQDKKTFIWT MAHFFDVKDKVLASKSKYFLITKSPLDMKKILVDWHFVPSEVKMINVGPGNDREGTIKLG DNQSFTAEEAAAFEEIEKAGYKVDFALLPDQRIGSWAHFKAKFGY >gi|237663596|gb|GG668922.1| GENE 716 722688 - 723119 466 143 aa, chain - ## HITS:1 COG:CAC1457 KEGG:ns NR:ns ## COG: CAC1457 COG2893 # Protein_GI_number: 15894736 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Clostridium acetobutylicum # 1 143 1 142 142 110 40.0 8e-25 MTYLVLVSHGDFARGLKNSLGMFAGDEIEKVRVFGLQPGESTDNFGKRFLCEVEKLPQET RLIVLADIVGGSPLATICKVLDKQKMLENSLIVGGVNFPMALNALLLKETSELSDLKKMI VADACHGIRELTITEGDVTEEDI >gi|237663596|gb|GG668922.1| GENE 717 723700 - 723987 275 95 aa, chain + ## HITS:1 COG:no KEGG:EF1833 NR:ns ## KEGG: EF1833 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 81 1 81 95 85 100.0 5e-16 MSAKEKTMKYGLVGLFLGILLLAHLDLLAENLSYLLLGLLLLLVAYLILVKKFYFFSNLI PKNTTDINLGKKYGTASGIGSLVIGIILIILGLFL >gi|237663596|gb|GG668922.1| GENE 718 724233 - 724748 619 171 aa, chain - ## HITS:1 COG:SP1192 KEGG:ns NR:ns ## COG: SP1192 COG0698 # Protein_GI_number: 15901057 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Streptococcus pneumoniae TIGR4 # 1 171 1 171 171 277 77.0 7e-75 MKIAIGCDHIVTDTKIAVSDFLKAKGYEILDVGTYDFTRTHYPIFGKKVGEAVMSNQADL GICICGTGVGITNAVNKVPGIRSALVRDMTTALYAKEELNANVIGFGGKITGEFLICDIA AAFIEAHYHPTEDNEQLIEKINQVEKQHPEQQDAHFFDEFLDKWQRGVYHD >gi|237663596|gb|GG668922.1| GENE 719 724774 - 725202 620 142 aa, chain - ## HITS:1 COG:SA1997 KEGG:ns NR:ns ## COG: SA1997 COG0698 # Protein_GI_number: 15927775 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Staphylococcus aureus N315 # 1 141 1 141 142 159 60.0 2e-39 MRVILGSDLDGIKLKAEMKQYLLQEKVEVIDKSESASEDFIEATLAVAHEVLKDTESLGI VFDGYGAGSFMTAAKIKGMIVAELSDERSAYMAREHNNARMITVGAKIVGTELAKNIIKE FLTGHYAGGRHQIRVDMLNKMA >gi|237663596|gb|GG668922.1| GENE 720 725425 - 725919 415 164 aa, chain + ## HITS:1 COG:CAC2958 KEGG:ns NR:ns ## COG: CAC2958 COG1762 # Protein_GI_number: 15896211 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Clostridium acetobutylicum # 5 156 6 155 164 110 38.0 1e-24 MVIKTSIFSLDTTYISNKKTQEEVFEEVYLDLLKKKLVTPDFLTNLLEREHNYPTGLSLT PIDPALPNIAIPHTESTFVRTTRIIPIKLKQSLSFHNMIIPDETLSVSFLFMILNENGIE QTGLLATIMDFINTTDRSSLLAFFQCEDKEEVYRFLQKNFKGEI >gi|237663596|gb|GG668922.1| GENE 721 725921 - 726223 433 100 aa, chain + ## HITS:1 COG:SPy1710 KEGG:ns NR:ns ## COG: SPy1710 COG3414 # Protein_GI_number: 15675563 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Streptococcus pyogenes M1 GAS # 1 95 1 95 101 139 69.0 1e-33 MIKILAACGAGVNSSHQIKSALETELSKRGYQVSCDAVMIKDINQEMLSHYDIFAQIAKT DLGFPITIPVVDAGAILYRIPAMAEPVYQQMESIIHSLNK >gi|237663596|gb|GG668922.1| GENE 722 726318 - 727721 1300 467 aa, chain + ## HITS:1 COG:CAC2956 KEGG:ns NR:ns ## COG: CAC2956 COG3775 # Protein_GI_number: 15896209 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Clostridium acetobutylicum # 1 464 1 465 470 585 69.0 1e-167 MNTIIDLANTIFKPLIDLGAAPLMTIVLTLIALCFKVKPTRALEGGLKLGIALTGISAII GILTTAFSDAMASFVERTGISLNITDVGWAPLATITWGSPYTLYFLLIMVIVNVIMLILN KTNTLDVDIFDIWHLSIVGLFAIFCGANLIIATILVIFIGVLKIINSDLMKPTFNDLLNA PDTNPMTTTHMNYMMNPIIMVFDKIFDKLFPWLDKYDFDAAKLNSKIGFWGSKFAIGIYL GIFVGLLAGQTPTQIFSLSFTAAVCLELFSLIGTWFIAAVEPLSQGITDFASNKLKGRTL NIGLDWPFLAGRAEIWAAANVLAPIMLLEAIVLPGNKLLPLGGIIAMGVTPALLVVTRGK LIRMIIIGAIELPLFLWSGTLIAPFVTETAKKVGAFPAGLNNNTLISHTTMEGPMEKFLG YLVGNASQGQLEFILYACLALVAYLLIFIWYAKQMKKRNIIYAQKAQ >gi|237663596|gb|GG668922.1| GENE 723 727762 - 728514 734 250 aa, chain - ## HITS:1 COG:SA1998 KEGG:ns NR:ns ## COG: SA1998 COG1349 # Protein_GI_number: 15927776 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Staphylococcus aureus N315 # 1 249 1 250 251 224 50.0 2e-58 MLKEERLNAIVSLVDQKGAIKVTEIMERLNVSDMTVRRDLTELEAAGRLKRVHGGASSLN TYRPHELSHADKQIINSVEKKEIVQKALSLIHEEETIFLGPGTTIELLAEAMEFKHLRVV TNCLPVFETLSKKKNALTIYLVGGEMRLLTKSFFGEIANKALEEMHFHKAFFSCNALKDN KIMTATIEEGQTQAIALDNSIEKYLLMDTSKVEKQDFYSFYQLEEVTAVVTNKDKFDTSK VLEKVVRVIY >gi|237663596|gb|GG668922.1| GENE 724 728850 - 729695 819 281 aa, chain - ## HITS:1 COG:no KEGG:LCAZH_1904 NR:ns ## KEGG: LCAZH_1904 # Name: not_defined # Def: hypothetical protein # Organism: L.casei_Zhang # Pathway: not_defined # 20 160 66 211 214 114 44.0 5e-24 MSTESKSSTTQSNSSASTKTENQLWSVQKKAQLQQFMADWGQRMNQTYKEYIPGNLINFN GVQAPDGLVGNVTMQPAIGQHPIYLEWSENGQVKDGYALVAVYSDAETQPEMQKHLYLFT IVNNQPLVLVTMQNQGDPYGYLYFGATDNAELRAGFEKIVGAPSITKEQIPNISVNPWSS KEEAIDFYEGMYKNTANEISTQIDWHNYQRANWREVETKGDTLTLHFANAGGAGGSYTQF TKVGTNTVVVSFDGNAAYPDNPSSVLLVQNSDYKVLRTLNQ >gi|237663596|gb|GG668922.1| GENE 725 729709 - 729840 79 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKIILIGLLLSILSGCSSNKSGDSTASKSSKPTATSEMKAQQ >gi|237663596|gb|GG668922.1| GENE 726 729931 - 730509 453 192 aa, chain - ## HITS:1 COG:L132126 KEGG:ns NR:ns ## COG: L132126 COG1713 # Protein_GI_number: 15673861 # Func_class: H Coenzyme transport and metabolism # Function: Predicted HD superfamily hydrolase involved in NAD metabolism # Organism: Lactococcus lactis # 5 187 10 192 197 167 45.0 1e-41 MDHQQVLKNEIKQYLVSKNCEKTYYHCMEVGEYAYQLGEKYLTSPEKVSIAGYLHDISAV YPNNQRISVAQKYGIELNETEMAFPMIIHQKISKSIAKMDFGIEDNEILSAIECHTTLKK NYSDIDLVLFVADKIKWDQEGKPPYLDGLLQALNCSLENAAYFYIDYILKHDIKVVHPWL WDAYNQLNLIIK >gi|237663596|gb|GG668922.1| GENE 727 730937 - 731638 604 233 aa, chain + ## HITS:1 COG:CAC0090 KEGG:ns NR:ns ## COG: CAC0090 COG0726 # Protein_GI_number: 15893386 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Clostridium acetobutylicum # 1 232 55 292 293 144 36.0 1e-34 MTISSKKYAYSADKIRKYITGEEPYKGEKLVFLTFDDGVNNQITPQVLDTLKKYNVHATF FLVGNTLTSENQKIVKREVAEGHSIGFHSSTHDYATLYPNGIVNTKEIQAEIATMENSLK KILGETFQTTLWRYPGGHMSWGGTEKSDELFKQLGIHWIDWNAMVGDAEPLDRQPTTVAE MLAFHQHSLEVYPDYNIRVVLMHDSVDKELTKQALPQLIEFYQANGYQFGVLY >gi|237663596|gb|GG668922.1| GENE 728 731812 - 732228 358 138 aa, chain - ## HITS:1 COG:no KEGG:EF1844 NR:ns ## KEGG: EF1844 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 138 1 138 138 213 100.0 3e-54 MKKIGYFSCIIFFMFLVGCSNNKKENGNLLNASSFPLILTTIIEKEEDLTKGSIFFNKDK TMTLEKEYLVNPNNEDTKKTSRTEKKVYKNIKIQENKESYEIIGQLDKKTKKIEFKKVDE GKRISDAEGNVYGDFGGK >gi|237663596|gb|GG668922.1| GENE 729 732244 - 732327 135 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEATLPMVQARRKELSILMNNSYSNFM >gi|237663596|gb|GG668922.1| GENE 730 732493 - 732660 110 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227519032|ref|ZP_03949081.1| ## NR: gi|227519032|ref|ZP_03949081.1| hypothetical protein HMPREF0348_2015 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_0820 [Enterococcus faecalis HH22] predicted protein [Enterococcus faecalis Merz96] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] hypothetical protein HMPREF9492_02132 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_01504 [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF0348_2015 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_0820 [Enterococcus faecalis HH22] predicted protein [Enterococcus faecalis Merz96] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] hypothetical protein [Enterococcus sp. 7L76] hypothetical protein HMPREF9492_02132 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_01504 [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF9507_00276 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9506_02282 [Enterococcus faecalis TX0309A] # 1 55 1 55 55 82 100.0 8e-15 MFAIVLRVVILLITVKIVDYFANTPEVQIQRKLPEFEKVPPYDPRDNSFLIQIIL >gi|237663596|gb|GG668922.1| GENE 731 732584 - 732688 113 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEELEWNNFYVCYSFEGSDSFNNCQDSRLLCEYS >gi|237663596|gb|GG668922.1| GENE 732 733386 - 734564 803 392 aa, chain - ## HITS:1 COG:SA1835 KEGG:ns NR:ns ## COG: SA1835 COG0582 # Protein_GI_number: 15927603 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Staphylococcus aureus N315 # 27 390 30 381 390 110 29.0 6e-24 MENMSRFKKHITATGKITWYFQAFRTTRRGFNSKREAQLAYLEMVKQHRNKQKRLASNDK FSVVSQKWFEYYRSLNEQKVATYDKREEQVKILNRWIGGKKLSSLSSEELQKFLFILKEK GIDGVNVGYAKNSLQSLVQVLNMVFNYCKKKNLINENPMKFVKMPKYQLSLKDLKESVNS LEDKFLTVDELRAFLNYGIVYEELPMSVLFHVLFYTGCRVSEALALQPQDIDFERNEILF YKQTAVKGKSKDFRIETTKTVSSARRVPVTPLVMEKLQELIDVLNKTKRNSNFVVDETYL FVYLDPGKRGVPYRREYVNDHVKRCVERCGINKDFHTHLARHTMASLVAEYCSWDVLKDR LGHTDSTTSKIYRHLTSTEKLKPLTAFNSLEG >gi|237663596|gb|GG668922.1| GENE 733 734667 - 734978 159 103 aa, chain - ## HITS:1 COG:no KEGG:EF1848 NR:ns ## KEGG: EF1848 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 12 103 12 103 103 177 100.0 2e-43 MSKNNNKSNSSELEKYLFHPEKIEDSNNKMKRINQLPLVLTNKDLKEQFQISDSTLNRLI KLGDFPSCWFGIRGHYLRDDILEWVKKGNEEYFCDQFRLLRLL >gi|237663596|gb|GG668922.1| GENE 734 735327 - 735572 58 81 aa, chain - ## HITS:1 COG:no KEGG:EF1849 NR:ns ## KEGG: EF1849 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 81 1 81 81 145 100.0 4e-34 MVDKQRNQHYPLVPISIILSALKEDPISIKMILKHYHGYITKLCLKNGFNEVGQFITYVD EYMLRQLEIKLIEAILKFKVN >gi|237663596|gb|GG668922.1| GENE 735 735566 - 735967 369 133 aa, chain - ## HITS:1 COG:no KEGG:EF1850 NR:ns ## KEGG: EF1850 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 133 1 133 133 243 100.0 3e-63 MQQNNNEISTQHQFDAYCKKVLRNEAKSIRKRNDKIKENEEPLNDLNEGKYSQTHLDEQD VYFLFGMEILISDQKLSAAIDQLSDTRKKIVLLYYFAGFNDTEIGKIFNMSTSGIWYQRT KAVEQLKMEYGLW >gi|237663596|gb|GG668922.1| GENE 736 736535 - 738370 1346 611 aa, chain - ## HITS:1 COG:SP0060 KEGG:ns NR:ns ## COG: SP0060 COG1874 # Protein_GI_number: 15900005 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 1 593 1 590 595 631 52.0 1e-180 MQTFEIKEEFLVDGKPTKLISGAIHYFRMTPAQWEDSLYNLKALGANTIETYIPWNLHEP VEGVYDFEGMKDIVAFVSLAQELGLMVILRPSVYICAEWEFGGLPAWLLKEHVRLRSTDP RFIAKVRTYFSVLLPKLVPLQVTHGGPVIMMQVENEYGSYGMEKEYLRQTKQVMEEFGID VPLFTSDGAWEEVLDVGTLIEEDVFVTGNFGSHSKENATVMKAFMAKHDKKWPIMCMEYW DGWFNRWGEPIIKRDGQDLANEVKDMLALGSLNLYMFHGGTNFGFYNGCSARGVLDLPQV TSYDYDALLTEAGEPTEKYFHVQRAIKEVCPEVWQAEPRRKTFGSLGTFPVQNSVSLLAV KDQMMTAQETMYPITMEEAESGYGYMLYSVNLKNYHHENKLKVVEASDRLHLFADGSLQT IQYQENLREEVMIKGTPEKEWIELDVLVENLGRVNYGFKLNGPTQVKGIRGGIMQDIHFH QGYRQYALTLSADQLKKIDYTAGKNPAQPSFYQAEFTLTDLADTFIDCRSYGKGVVIVNG INLGRYWQRGPIHSLYCPKEFLKKGTNEIVIFETEGIEINELIFCGQPIVKKLLTNDFSE IGSNIHNHIDS >gi|237663596|gb|GG668922.1| GENE 737 738542 - 739804 802 420 aa, chain - ## HITS:1 COG:lin2856 KEGG:ns NR:ns ## COG: lin2856 COG1455 # Protein_GI_number: 16801916 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 9 392 8 388 454 300 42.0 3e-81 MSEKIMNTIQNKVLPIATKIGNQRFLVALRDSFMGTMPVIMTGSVAILLNAFLVDFPMQF GYEKITDYFQWLVDINNLISKGSISIVSLLFIYCLGVNIAKIYKTDTLSSGLVALSSFII SISNSMTSTYNLSNNNNIDLTTLFTDVEGITVTGNSLNVTISGLLPGTQINSNGYFTAII IGFLSSIIFCKLMNKNWTIKLPDTVPPAIAKPFLSIIPALVSLYIIAILTFLLNRITGKI LTDVIYEILQRPMLGLSQSFFVVILVAFLVQFFWFFGIHGGNVMAPIMEGVFGVALLVNL EAYQNNETIPYVWTSVSYGSFVWYATLGLLIAIFWVSKNSHYKEVAKLGIMPVLFNIGEP VMYGLPTVLNPILFIPFLLCPAVMSSVAYLVTDFKLGFSSNTKCNLGNTTGLIWILFDRI >gi|237663596|gb|GG668922.1| GENE 738 739942 - 740166 164 74 aa, chain + ## HITS:1 COG:no KEGG:EF1853 NR:ns ## KEGG: EF1853 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 74 1 74 74 131 100.0 7e-30 MEDFWYHNKSVSAPISLSQCGYESYHPNSSIRNYIVQQKWIFHYVLSGKGFLEVEAQHFE LIEHDIFFFFKVKK >gi|237663596|gb|GG668922.1| GENE 739 740163 - 740327 127 54 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519041|ref|ZP_03949090.1| ## NR: gi|227519041|ref|ZP_03949090.1| hypothetical protein HMPREF0348_2024 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_0829 [Enterococcus faecalis HH22] hypothetical protein HMPREF0349_0777 [Enterococcus faecalis TX1322] predicted protein [Enterococcus faecalis ATCC 4200] predicted protein [Enterococcus faecalis T8] predicted protein [Enterococcus faecalis Merz96] predicted protein [Enterococcus faecalis HIP11704] predicted protein [Enterococcus faecalis CH188] transcriptional regulator, AraC family [Enterococcus faecalis R712] transcriptional regulator, AraC family [Enterococcus faecalis S613] msm operon regulatory protein [Enterococcus faecium E1636] hypothetical protein HMPREF9514_01721 [Enterococcus faecalis TX0855] hypothetical protein HMPREF9521_01336 [Enterococcus faecalis TX2134] hypothetical protein HMPREF9515_00135 [Enterococcus faecalis TX0860] hypothetical protein HMPREF9509_02029 [Enterococcus faecalis TX0411] hypothetical protein HMPREF9512_01350 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9492_02141 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_01512 [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF0348_2024 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_0829 [Enterococcus faecalis HH22] hypothetical protein HMPREF0349_0777 [Enterococcus faecalis TX1322] predicted protein [Enterococcus faecalis ATCC 4200] predicted protein [Enterococcus faecalis T8] predicted protein [Enterococcus faecalis Merz96] predicted protein [Enterococcus faecalis HIP11704] predicted protein [Enterococcus faecalis CH188] transcriptional regulator, AraC family [Enterococcus faecalis R712] transcriptional regulator, AraC family [Enterococcus faecalis S613] msm operon regulatory protein [Enterococcus faecium E1636] hypothetical protein HMPREF9509_02029 [Enterococcus faecalis TX0411] hypothetical protein HMPREF9515_00135 [Enterococcus faecalis TX0860] hypothetical protein HMPREF9521_01336 [Enterococcus faecalis TX2134] hypothetical protein HMPREF9514_01721 [Enterococcus faecalis TX0855] hypothetical protein HMPREF9492_02141 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9512_01350 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9493_01512 [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF9496_01510 [Enterococcus faecalis TX4000] hypothetical protein HMPREF9500_02044 [Enterococcus faecalis TX0017] hypothetical protein HMPREF9495_01300 [Enterococcus faecalis TX2141] hypothetical protein HMPREF9513_00593 [Enterococcus faecalis TX0645] hypothetical protein HMPREF9507_00268 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9511_01912 [Enterococcus faecalis TX0630] hypothetical protein HMPREF9506_02273 [Enterococcus faecalis TX0309A] hypothetical protein EF62_2200 [Enterococcus faecalis 62] # 1 54 1 54 54 82 100.0 1e-14 MKYYTDKKEPWTLIWLGIQGDKTSEFLKETTLLNTHTVSLTKNINKKHTIENSM >gi|237663596|gb|GG668922.1| GENE 740 740421 - 741713 1178 430 aa, chain - ## HITS:1 COG:RSc0252 KEGG:ns NR:ns ## COG: RSc0252 COG3328 # Protein_GI_number: 17544971 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 24 399 31 405 416 281 39.0 2e-75 MARKKRNPDAEKLAESILNAYQPESVDDMQDALKDVFGPLFEKMLQGELNNHLGYDAHSK EPKEHDNRRNGYGTKTLKTSFGEVAIDVPRDREASFEPELIPKRKRDVSDIEGKVLSMYA RGMSQRDIAATVEAIYGFDISHEMISDITDAVLPELEEWQARPLAKCYAFLFVDCMYVTL RENYEAKEYAVYTILGYDLKGNKEILGLWLNQTESKNRWMQVFDELKARGVEDVFFISMD GVSGLEEGAKAIFPSVIVQRCIVHLVRNALRYIPSKDYKEVCRDMKKFYGASSLNAAHAA FGSFQNRWSHYSGAVDVWKRNFAHVEQLFDYGSAIRKIMYTTNAVESVHSSFRKVTKKGA FSNENALLKLLYLRTKELHAKWSGGRIQNWAMVLKQLMINETFSSRMKSMRFTFRNNGRF IQLCVRSKFI >gi|237663596|gb|GG668922.1| GENE 741 741986 - 742246 131 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227519043|ref|ZP_03949092.1| ## NR: gi|227519043|ref|ZP_03949092.1| hypothetical protein HMPREF0348_2026 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0349_0775 [Enterococcus faecalis TX1322] predicted protein [Enterococcus faecalis ATCC 4200] predicted protein [Enterococcus faecalis Merz96] predicted protein [Enterococcus faecalis HIP11704] predicted protein [Enterococcus faecium 1,231,408] hypothetical protein EfaeD_14121 [Enterococcus faecium DO] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] hypothetical protein HMPREF9514_01719 [Enterococcus faecalis TX0855] hypothetical protein HMPREF9521_01334 [Enterococcus faecalis TX2134] hypothetical protein HMPREF9515_00133 [Enterococcus faecalis TX0860] hypothetical protein HMPREF9509_02027 [Enterococcus faecalis TX0411] hypothetical protein HMPREF9512_01352 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9492_02143 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_01514 [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF0348_2026 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0349_0775 [Enterococcus faecalis TX1322] predicted protein [Enterococcus faecalis ATCC 4200] predicted protein [Enterococcus faecalis Merz96] predicted protein [Enterococcus faecalis HIP11704] predicted protein [Enterococcus faecium 1,231,408] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] hypothetical protein HMPREF9509_02027 [Enterococcus faecalis TX0411] hypothetical protein HMPREF9515_00133 [Enterococcus faecalis TX0860] hypothetical protein HMPREF9521_01334 [Enterococcus faecalis TX2134] hypothetical protein HMPREF9514_01719 [Enterococcus faecalis TX0855] hypothetical protein HMPREF9492_02143 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9512_01352 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9493_01514 [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF9496_01508 [Enterococcus faecalis TX4000] hypothetical protein HMPREF9500_02042 [Enterococcus faecalis TX0017] hypothetical protein HMPREF9495_01303 [Enterococcus faecalis TX2141] hypothetical protein HMPREF9513_00595 [Enterococcus faecalis TX0645] hypothetical protein HMPREF9507_00266 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9511_01910 [Enterococcus faecalis TX0630] hypothetical protein HMPREF9506_02271 [Enterococcus faecalis TX0309A] # 1 86 1 86 86 84 100.0 3e-15 MKKIDLINMIGMLIGILVNIVIFTDWLGVLFSNLIPILIIGICGIILSILELFESRNTMN RIFACIILIVNLLPMVYFTFLYFALG Prediction of potential genes in microbial genomes Time: Tue Jul 5 12:21:06 2011 Seq name: gi|237663595|gb|GG668923.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD2, whole genome shotgun sequence Length of sequence - 492313 bp Number of predicted genes - 533, with homology - 510 Number of transcription units - 215, operones - 129 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 13 - 72 6.3 1 1 Op 1 25/0.000 + CDS 191 - 1195 996 ## COG0438 Glycosyltransferase 2 1 Op 2 . + CDS 1242 - 2465 1362 ## COG0438 Glycosyltransferase + Term 2469 - 2524 11.9 3 2 Tu 1 . + CDS 2538 - 3428 1091 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases + Prom 3442 - 3501 7.0 4 3 Tu 1 . + CDS 3529 - 3759 310 ## EF2888 hypothetical protein + Term 3783 - 3834 8.7 + Prom 4048 - 4107 4.5 5 4 Op 1 4/0.043 + CDS 4149 - 4589 508 ## COG1846 Transcriptional regulators 6 4 Op 2 . + CDS 4605 - 5570 1067 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 7 4 Op 3 . + CDS 5623 - 5850 545 ## EF2884 acyl carrier protein + Prom 5878 - 5937 2.1 8 5 Op 1 3/0.106 + CDS 5987 - 6943 1082 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 9 5 Op 2 26/0.000 + CDS 6976 - 7905 1086 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 10 5 Op 3 11/0.000 + CDS 7909 - 8646 214 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 11 5 Op 4 4/0.043 + CDS 8665 - 9900 1553 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 12 5 Op 5 4/0.043 + CDS 9902 - 10390 626 ## COG0511 Biotin carboxyl carrier protein 13 5 Op 6 4/0.043 + CDS 10394 - 10819 576 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 14 5 Op 7 4/0.043 + CDS 10827 - 12197 1476 ## COG0439 Biotin carboxylase 15 5 Op 8 10/0.000 + CDS 12292 - 13158 848 ## COG0777 Acetyl-CoA carboxylase beta subunit 16 5 Op 9 . + CDS 13160 - 13948 1025 ## COG0825 Acetyl-CoA carboxylase alpha subunit + Term 13955 - 14005 3.1 + Prom 13952 - 14011 10.2 17 6 Op 1 6/0.000 + CDS 14170 - 14697 615 ## COG2179 Predicted hydrolase of the HAD superfamily 18 6 Op 2 2/0.170 + CDS 14694 - 15803 1375 ## COG1161 Predicted GTPases 19 6 Op 3 7/0.000 + CDS 15827 - 16138 286 ## PROTEIN SUPPORTED gi|15901580|ref|NP_346184.1| hypothetical protein SP_1748 20 6 Op 4 9/0.000 + CDS 16156 - 16815 619 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 21 6 Op 5 6/0.000 + CDS 16793 - 17383 890 ## COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism + Prom 17459 - 17518 3.5 22 6 Op 6 6/0.000 + CDS 17619 - 17768 175 ## COG0799 Uncharacterized homolog of plant Iojap protein 23 6 Op 7 3/0.106 + CDS 17770 - 18510 816 ## COG0500 SAM-dependent methyltransferases + Term 18532 - 18570 -0.7 + Prom 18519 - 18578 4.6 24 7 Op 1 . + CDS 18600 - 19778 999 ## COG1323 Predicted nucleotidyltransferase + Prom 19782 - 19841 3.4 25 7 Op 2 . + CDS 19865 - 20584 1043 ## COG0217 Uncharacterized conserved protein + Prom 20920 - 20979 21.4 26 8 Tu 1 . + CDS 21118 - 21936 587 ## EF2864 hypothetical protein + Term 22088 - 22122 4.3 27 9 Tu 1 . - CDS 22546 - 23490 1336 ## EF2863 endo-beta-N-acetylglucosaminidase - Prom 23550 - 23609 5.9 - Term 23601 - 23640 8.1 28 10 Tu 1 . - CDS 23648 - 24229 670 ## COG1434 Uncharacterized conserved protein - Prom 24260 - 24319 9.5 + Prom 24117 - 24176 5.6 29 11 Op 1 . + CDS 24420 - 25205 592 ## EF2861 aminoglycoside 6-adenylyltransferase + Prom 25207 - 25266 2.9 30 11 Op 2 . + CDS 25361 - 26806 1452 ## COG1376 Uncharacterized protein conserved in bacteria + Term 26864 - 26910 6.0 + Prom 26882 - 26941 6.5 31 12 Tu 1 . + CDS 26971 - 27150 291 ## COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog + Prom 27379 - 27438 6.5 32 13 Tu 1 . + CDS 27547 - 29484 2655 ## COG0441 Threonyl-tRNA synthetase + Term 29492 - 29550 20.8 + Prom 29533 - 29592 14.7 33 14 Op 1 . + CDS 29651 - 31786 2308 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 + Prom 31805 - 31864 5.8 34 14 Op 2 . + CDS 31912 - 32061 267 ## PROTEIN SUPPORTED gi|29377324|ref|NP_816478.1| ribosomal protein L33 + Term 32074 - 32121 8.3 + TRNA 32157 - 32246 62.4 # Ser CGA 0 0 + Prom 32171 - 32230 80.4 35 15 Op 1 . + CDS 32336 - 32587 440 ## EF2797 hypothetical protein + Term 32624 - 32676 4.2 + Prom 32596 - 32655 5.4 36 15 Op 2 . + CDS 32843 - 33907 607 ## EF2796 hypothetical protein 37 16 Tu 1 . - CDS 33970 - 35472 912 ## BBPR_0060 hypothetical protein - Term 35834 - 35882 5.4 38 17 Tu 1 . - CDS 36008 - 36583 626 ## COG3152 Predicted membrane protein - Prom 36606 - 36665 8.4 + Prom 36663 - 36722 5.7 39 18 Op 1 . + CDS 36749 - 37519 828 ## COG1073 Hydrolases of the alpha/beta superfamily + Prom 37528 - 37587 4.0 40 18 Op 2 4/0.043 + CDS 37607 - 38149 572 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 41 18 Op 3 3/0.106 + CDS 38160 - 38870 703 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 42 18 Op 4 5/0.000 + CDS 38888 - 39106 447 ## COG4483 Uncharacterized protein conserved in bacteria 43 18 Op 5 2/0.170 + CDS 39107 - 40078 1106 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 44 18 Op 6 . + CDS 40094 - 40498 565 ## COG0607 Rhodanese-related sulfurtransferase 45 19 Op 1 . - CDS 40839 - 41237 478 ## gi|227519431|ref|ZP_03949480.1| hypothetical protein HMPREF0348_2414 46 19 Op 2 . - CDS 41258 - 41941 574 ## gi|227519432|ref|ZP_03949481.1| hypothetical protein HMPREF0348_2415 - Prom 41963 - 42022 8.1 47 20 Op 1 . + CDS 42251 - 42601 563 ## COG3189 Uncharacterized conserved protein 48 20 Op 2 . + CDS 42615 - 44453 1479 ## EF2785 hypothetical protein + Term 44493 - 44541 15.7 - Term 44474 - 44535 21.3 49 21 Tu 1 . - CDS 44616 - 44783 366 ## EF2784 hypothetical protein 50 22 Op 1 . + CDS 45987 - 47201 1199 ## COG4468 Galactose-1-phosphate uridyltransferase 51 22 Op 2 30/0.000 + CDS 47273 - 49033 1896 ## COG2812 DNA polymerase III, gamma/tau subunits 52 22 Op 3 . + CDS 49054 - 49368 570 ## COG0718 Uncharacterized protein conserved in bacteria + Term 49391 - 49452 19.0 + Prom 49450 - 49509 3.4 53 23 Op 1 1/0.234 + CDS 49703 - 50233 492 ## COG4732 Predicted membrane protein 54 23 Op 2 6/0.000 + CDS 50217 - 51035 771 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 55 23 Op 3 11/0.000 + CDS 51032 - 51667 537 ## COG0352 Thiamine monophosphate synthase 56 23 Op 4 . + CDS 51664 - 52494 982 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase + Term 52500 - 52547 14.2 - Term 52488 - 52535 14.2 57 24 Tu 1 . - CDS 52587 - 52943 370 ## COG1733 Predicted transcriptional regulators - Prom 52991 - 53050 8.6 + Prom 52939 - 52998 2.7 58 25 Tu 1 . + CDS 53088 - 54260 1323 ## COG2814 Arabinose efflux permease + Term 54294 - 54336 4.2 - Term 54281 - 54323 5.1 59 26 Tu 1 . - CDS 54330 - 55691 1222 ## COG0477 Permeases of the major facilitator superfamily - Prom 55740 - 55799 5.7 - Term 55715 - 55767 10.0 60 27 Tu 1 . - CDS 55855 - 56640 686 ## EF2771 hypothetical protein - Prom 56781 - 56840 7.8 + Prom 56750 - 56809 6.5 61 28 Op 1 4/0.043 + CDS 57014 - 57577 666 ## COG4721 Predicted membrane protein 62 28 Op 2 . + CDS 57574 - 58932 1065 ## COG1122 ABC-type cobalt transport system, ATPase component 63 28 Op 3 . + CDS 58923 - 59576 365 ## EF2768 hypothetical protein 64 28 Op 4 . + CDS 59588 - 60250 853 ## COG0819 Putative transcription activator + Term 60259 - 60302 5.2 + Prom 60295 - 60354 4.4 65 29 Tu 1 . + CDS 60426 - 61022 631 ## COG0353 Recombinational DNA repair protein (RecF pathway) + Prom 61144 - 61203 4.5 66 30 Op 1 4/0.043 + CDS 61231 - 61869 828 ## COG0125 Thymidylate kinase 67 30 Op 2 2/0.170 + CDS 61889 - 62218 482 ## COG3870 Uncharacterized protein conserved in bacteria 68 30 Op 3 7/0.000 + CDS 62220 - 63170 818 ## COG0470 ATPase involved in DNA replication 69 30 Op 4 5/0.000 + CDS 63287 - 64126 940 ## COG1774 Uncharacterized homolog of PSP1 70 30 Op 5 2/0.170 + CDS 64119 - 64466 409 ## COG4467 Uncharacterized protein conserved in bacteria + Term 64492 - 64552 17.5 + Prom 64476 - 64535 5.2 71 31 Op 1 . + CDS 64578 - 65450 987 ## COG0313 Predicted methyltransferases 72 31 Op 2 4/0.043 + CDS 65465 - 66127 214 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 73 31 Op 3 . + CDS 66111 - 66869 791 ## COG0390 ABC-type uncharacterized transport system, permease component + Term 66878 - 66926 7.1 + Prom 66878 - 66937 2.0 74 32 Tu 1 . + CDS 66995 - 68113 1338 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Term 68096 - 68153 17.0 75 33 Op 1 12/0.000 - CDS 68158 - 68754 536 ## COG0602 Organic radical activating enzymes 76 33 Op 2 . - CDS 68787 - 70970 1901 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 71067 - 71126 10.5 + Prom 71173 - 71232 6.9 77 34 Op 1 36/0.000 + CDS 71376 - 72143 290 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 78 34 Op 2 . + CDS 72133 - 74229 1625 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 74234 - 74277 9.4 + Prom 74340 - 74399 11.1 79 35 Op 1 . + CDS 74433 - 74582 161 ## EF2750 hypothetical protein 80 35 Op 2 6/0.000 + CDS 74597 - 76117 1727 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 81 35 Op 3 7/0.000 + CDS 76114 - 77319 1199 ## COG1696 Predicted membrane protein involved in D-alanine export 82 35 Op 4 6/0.000 + CDS 77352 - 77588 502 ## COG0236 Acyl carrier protein 83 35 Op 5 . + CDS 77588 - 78862 1269 ## COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) + Term 78923 - 78982 2.0 + Prom 78989 - 79048 10.0 84 36 Op 1 . + CDS 79075 - 80157 1317 ## COG1363 Cellulase M and related proteins 85 36 Op 2 . + CDS 80178 - 80969 760 ## EF2743 hypothetical protein + Term 80974 - 81028 12.2 + Prom 81029 - 81088 3.7 86 37 Op 1 2/0.170 + CDS 81114 - 81854 1058 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III 87 37 Op 2 . + CDS 81887 - 82891 1110 ## COG0095 Lipoate-protein ligase A + Term 82898 - 82932 5.3 + Prom 83271 - 83330 7.2 88 38 Tu 1 . + CDS 83505 - 84194 866 ## COG4122 Predicted O-methyltransferase + Term 84213 - 84269 17.5 + Prom 84351 - 84410 10.7 89 39 Op 1 2/0.170 + CDS 84435 - 84998 704 ## COG0450 Peroxiredoxin + Term 85024 - 85072 8.5 90 39 Op 2 . + CDS 85095 - 86777 1798 ## COG0492 Thioredoxin reductase + Term 86827 - 86872 11.1 - Term 86815 - 86859 6.3 91 40 Tu 1 . - CDS 86877 - 87467 253 ## gi|227519478|ref|ZP_03949527.1| hypothetical protein HMPREF0348_2461 - Prom 87487 - 87546 3.2 - Term 87515 - 87561 3.4 92 41 Op 1 . - CDS 87588 - 88121 531 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 93 41 Op 2 . - CDS 88155 - 88910 752 ## COG0708 Exonuclease III - Prom 88991 - 89050 7.8 94 42 Op 1 . + CDS 89117 - 90031 862 ## COG0673 Predicted dehydrogenases and related proteins 95 42 Op 2 . + CDS 90103 - 91005 1250 ## COG0812 UDP-N-acetylmuramate dehydrogenase + Term 91013 - 91061 18.8 - Term 90997 - 91053 20.1 96 43 Op 1 . - CDS 91079 - 91717 612 ## COG0517 FOG: CBS domain - Prom 91770 - 91829 7.3 97 43 Op 2 . - CDS 91930 - 92052 84 ## - Prom 92111 - 92170 3.9 + Prom 91797 - 91856 6.3 98 44 Op 1 . + CDS 92003 - 92155 267 ## PROTEIN SUPPORTED gi|29377208|ref|NP_816362.1| ribosomal protein L33 99 44 Op 2 . + CDS 92176 - 92346 291 ## EF2730 preprotein translocase, SecE subunit + Term 92392 - 92432 1.1 + Prom 92391 - 92450 7.4 100 45 Op 1 . + CDS 92471 - 93016 773 ## COG0250 Transcription antiterminator + Term 93063 - 93114 8.2 + Prom 93056 - 93115 3.3 101 45 Op 2 . + CDS 93135 - 94013 981 ## COG4814 Uncharacterized protein with an alpha/beta hydrolase fold + Term 94020 - 94064 12.4 - Term 93997 - 94060 21.1 102 46 Tu 1 . - CDS 94106 - 94828 387 ## EF2727 phosphosugar-binding transcriptional regulator, putative - Prom 94875 - 94934 13.9 + Prom 94608 - 94667 5.6 103 47 Op 1 . + CDS 94906 - 96534 1635 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 104 47 Op 2 . + CDS 96548 - 97651 1150 ## COG1363 Cellulase M and related proteins 105 47 Op 3 . + CDS 97648 - 98493 948 ## COG2362 D-aminopeptidase + Term 98498 - 98554 15.0 - Term 98484 - 98542 4.2 106 48 Op 1 9/0.000 - CDS 98558 - 99430 1092 ## COG1760 L-serine deaminase 107 48 Op 2 . - CDS 99453 - 100121 657 ## COG1760 L-serine deaminase - Prom 100356 - 100415 4.4 + Prom 100228 - 100287 5.2 108 49 Tu 1 . + CDS 100497 - 101993 1503 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 109 50 Op 1 55/0.000 + CDS 102116 - 102538 679 ## PROTEIN SUPPORTED gi|29377197|ref|NP_816351.1| ribosomal protein L11 + Prom 102567 - 102626 2.7 110 50 Op 2 43/0.000 + CDS 102650 - 103339 1156 ## PROTEIN SUPPORTED gi|29377196|ref|NP_816350.1| 50S ribosomal protein L1 + Term 103370 - 103415 10.0 111 51 Op 1 47/0.000 + CDS 103661 - 104161 786 ## PROTEIN SUPPORTED gi|227519497|ref|ZP_03949546.1| 50S ribosomal protein L10 112 51 Op 2 . + CDS 104224 - 104592 573 ## PROTEIN SUPPORTED gi|227519498|ref|ZP_03949547.1| ribosomal protein L7/L12 + Term 104617 - 104649 4.0 - Term 104605 - 104635 3.6 113 52 Tu 1 . - CDS 104640 - 105470 684 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 105540 - 105599 5.9 + Prom 105524 - 105583 8.7 114 53 Op 1 . + CDS 105619 - 107118 1581 ## COG0531 Amino acid transporters 115 53 Op 2 . + CDS 107096 - 110173 3152 ## COG3250 Beta-galactosidase/beta-glucuronidase + Term 110180 - 110228 5.1 + Prom 110219 - 110278 6.7 116 54 Tu 1 . + CDS 110354 - 110602 381 ## COG2261 Predicted membrane protein 117 55 Tu 1 . - CDS 111098 - 112468 1542 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Prom 112505 - 112564 10.1 + Prom 112355 - 112414 7.8 118 56 Op 1 . + CDS 112600 - 113400 824 ## COG2137 Uncharacterized protein conserved in bacteria 119 56 Op 2 . + CDS 113390 - 114574 1246 ## COG1194 A/G-specific DNA glycosylase + Term 114575 - 114628 8.6 + Prom 114629 - 114688 5.1 120 57 Op 1 . + CDS 114755 - 115879 998 ## COG1316 Transcriptional regulator + Prom 115966 - 116025 9.7 121 57 Op 2 . + CDS 116071 - 116502 506 ## EF2702 hypothetical protein + Term 116506 - 116555 15.1 - Term 116494 - 116542 7.3 122 58 Op 1 . - CDS 116547 - 117071 702 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 123 58 Op 2 . - CDS 117088 - 117909 940 ## COG1051 ADP-ribose pyrophosphatase - Prom 117942 - 118001 7.7 - Term 117986 - 118042 17.1 124 59 Op 1 4/0.043 - CDS 118072 - 119259 1642 ## COG3853 Uncharacterized protein involved in tellurite resistance 125 59 Op 2 . - CDS 119279 - 119959 758 ## COG4915 5-bromo-4-chloroindolyl phosphate hydrolysis protein - Prom 120191 - 120250 6.1 + Prom 120201 - 120260 9.4 126 60 Op 1 . + CDS 120362 - 120946 584 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 127 60 Op 2 . + CDS 120943 - 121239 379 ## EF2695 hypothetical protein 128 60 Op 3 . + CDS 121255 - 121950 1014 ## COG0775 Nucleoside phosphorylase + Term 121960 - 122012 18.0 - Term 121943 - 122003 21.2 129 61 Op 1 6/0.000 - CDS 122018 - 122284 257 ## COG2827 Predicted endonuclease containing a URI domain 130 61 Op 2 . - CDS 122274 - 123008 875 ## COG4123 Predicted O-methyltransferase - Prom 123041 - 123100 6.5 + Prom 123003 - 123062 5.9 131 62 Tu 1 . + CDS 123197 - 123823 760 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 123854 - 123901 4.0 + Prom 123923 - 123982 7.8 132 63 Op 1 28/0.000 + CDS 124007 - 125143 1055 ## COG0420 DNA repair exonuclease 133 63 Op 2 1/0.234 + CDS 125148 - 128285 3321 ## COG0419 ATPase involved in DNA repair 134 63 Op 3 . + CDS 128305 - 131502 3339 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family + Term 131510 - 131556 7.1 - Term 131497 - 131543 7.1 135 64 Tu 1 . - CDS 131555 - 132268 520 ## COG1011 Predicted hydrolase (HAD superfamily) + Prom 132268 - 132327 7.3 136 65 Op 1 . + CDS 132444 - 132530 107 ## 137 65 Op 2 . + CDS 132596 - 132964 408 ## COG1132 ABC-type multidrug transport system, ATPase and permease components + Term 132965 - 133027 7.3 138 66 Op 1 . - CDS 133039 - 134451 862 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 139 66 Op 2 . - CDS 134510 - 134821 163 ## SPs0878 hypothetical protein 140 66 Op 3 . - CDS 134909 - 135373 395 ## EF1276 hypothetical protein 141 66 Op 4 . - CDS 135391 - 135834 322 ## COG1396 Predicted transcriptional regulators - Prom 135966 - 136025 8.1 + Prom 135914 - 135973 7.4 142 67 Op 1 . + CDS 136005 - 136223 325 ## gi|227519527|ref|ZP_03949576.1| hypothetical protein HMPREF0348_2510 143 67 Op 2 . + CDS 136254 - 136412 214 ## gi|315162229|gb|EFU06246.1| conserved domain protein 144 67 Op 3 . + CDS 136447 - 136590 144 ## - Term 136332 - 136375 1.5 145 68 Tu 1 . - CDS 136556 - 137158 389 ## gi|227519530|ref|ZP_03949579.1| hypothetical protein HMPREF0348_2513 - Prom 137186 - 137245 6.5 + Prom 136961 - 137020 6.1 146 69 Tu 1 . + CDS 137232 - 137402 294 ## gi|257081758|ref|ZP_05576119.1| predicted protein + Term 137506 - 137561 -0.4 - Term 137460 - 137502 4.7 147 70 Tu 1 . - CDS 137527 - 138060 230 ## gi|227519533|ref|ZP_03949582.1| hypothetical protein HMPREF0348_2516 - Prom 138101 - 138160 7.8 148 71 Tu 1 . + CDS 138214 - 138348 223 ## gi|227519534|ref|ZP_03949583.1| hypothetical protein HMPREF0348_2517 + Prom 138398 - 138457 2.6 149 72 Op 1 . + CDS 138492 - 138653 262 ## gi|227519535|ref|ZP_03949584.1| hypothetical protein HMPREF0348_2518 150 72 Op 2 . + CDS 138658 - 138972 309 ## gi|227519536|ref|ZP_03949585.1| hypothetical protein HMPREF0348_2519 151 72 Op 3 . + CDS 138969 - 139196 261 ## EF2843 hypothetical protein 152 72 Op 4 . + CDS 139199 - 139468 208 ## CTC01073 hypothetical protein 153 72 Op 5 . + CDS 139546 - 139983 395 ## SPH_0086 hypothetical protein 154 72 Op 6 . + CDS 140003 - 140755 707 ## SPH_0087 hypothetical protein + Term 140771 - 140807 4.1 + Prom 140903 - 140962 5.4 155 73 Op 1 . + CDS 140983 - 141798 302 ## CLL_A2281 hypothetical protein 156 73 Op 2 . + CDS 141795 - 142115 235 ## gi|227519542|ref|ZP_03949591.1| hypothetical protein HMPREF0348_2525 157 73 Op 3 . + CDS 142105 - 142617 343 ## ELI_3127 prophage LambdaCh01 158 73 Op 4 . + CDS 142620 - 142874 255 ## gi|227519544|ref|ZP_03949593.1| hypothetical protein HMPREF0348_2527 159 73 Op 5 . + CDS 142871 - 143326 254 ## gi|227519545|ref|ZP_03949594.1| hypothetical protein HMPREF0348_2528 160 73 Op 6 . + CDS 143346 - 143651 557 ## SH1788 hypothetical protein 161 73 Op 7 2/0.170 + CDS 143741 - 144394 324 ## COG0286 Type I restriction-modification system methyltransferase subunit 162 73 Op 8 . + CDS 144391 - 145335 555 ## COG0582 Integrase + Prom 145338 - 145397 2.2 163 74 Tu 1 . + CDS 145567 - 145920 188 ## gi|227519549|ref|ZP_03949598.1| possible gp44 + Prom 145944 - 146003 1.8 164 75 Op 1 . + CDS 146037 - 146567 377 ## EF2828 ArpU family transcriptional regulator 165 75 Op 2 . + CDS 146614 - 146679 93 ## + TRNA 146828 - 146901 67.6 # Arg TCT 0 0 + Prom 146829 - 146888 78.7 166 76 Op 1 . + CDS 147062 - 147250 155 ## gi|227519551|ref|ZP_03949600.1| hypothetical protein HMPREF0348_2534 167 76 Op 2 . + CDS 147243 - 147557 369 ## gi|227519552|ref|ZP_03949601.1| hypothetical protein HMPREF0348_2535 + Prom 147649 - 147708 2.8 168 77 Op 1 . + CDS 147870 - 148577 463 ## gi|227519554|ref|ZP_03949603.1| hypothetical protein HMPREF0348_2537 169 77 Op 2 . + CDS 148574 - 148840 239 ## gi|227519555|ref|ZP_03949604.1| hypothetical protein HMPREF0348_2538 170 77 Op 3 . + CDS 148911 - 148988 81 ## 171 77 Op 4 . + CDS 149058 - 149549 340 ## Sca_0492 hypothetical protein 172 77 Op 5 . + CDS 149552 - 151243 1227 ## COG4626 Phage terminase-like protein, large subunit 173 77 Op 6 . + CDS 151254 - 151421 187 ## gi|227519558|ref|ZP_03949607.1| hypothetical protein HMPREF0348_2541 174 77 Op 7 . + CDS 151436 - 151618 200 ## gi|227519559|ref|ZP_03949608.1| hypothetical protein HMPREF0348_2542 175 77 Op 8 . + CDS 151652 - 152815 849 ## JDM1_0502 phage portal protein, HK97 family 176 77 Op 9 . + CDS 152802 - 153521 631 ## COG0740 Protease subunit of ATP-dependent Clp proteases 177 77 Op 10 . + CDS 153524 - 154705 1289 ## BcerKBAB4_3589 hypothetical protein 178 77 Op 11 . + CDS 154782 - 155063 168 ## Sca_0497 hypothetical protein 179 77 Op 12 . + CDS 155047 - 155424 320 ## LMHCC_1370 gp8 180 77 Op 13 . + CDS 155421 - 155813 369 ## JDM1_0507 gp9 protein 181 77 Op 14 . + CDS 155810 - 156205 288 ## JDM1_0508 GP10 protein 182 77 Op 15 . + CDS 156238 - 156831 848 ## spyM18_0379 putative major tail protein 183 77 Op 16 . + CDS 156905 - 157378 711 ## COG5492 Bacterial surface proteins containing Ig-like domains + Term 157394 - 157427 2.1 184 78 Tu 1 . + CDS 157435 - 157782 471 ## gi|315573869|gb|EFU86060.1| conserved hypothetical protein + Prom 157873 - 157932 1.7 185 79 Op 1 . + CDS 158004 - 162755 4613 ## COG5283 Phage-related tail protein 186 79 Op 2 . + CDS 162755 - 163654 617 ## EF0349 tail protein, putative 187 79 Op 3 . + CDS 163657 - 164781 645 ## EF0350 hypothetical protein 188 79 Op 4 . + CDS 164792 - 165847 1167 ## EF0351 structural protein, putative 189 79 Op 5 . + CDS 165858 - 166649 507 ## EF0352 hypothetical protein + Term 166672 - 166707 3.4 190 80 Op 1 . + CDS 166725 - 166979 368 ## EF0353 holin, putative 191 80 Op 2 . + CDS 166982 - 167188 360 ## EF0354 holin, putative 192 80 Op 3 . + CDS 167191 - 167412 377 ## EF0355 endolysin, putative + Prom 167714 - 167773 80.3 193 81 Op 1 . + CDS 167847 - 168011 163 ## EF0355 endolysin, putative + Term 168058 - 168089 2.5 + Prom 168076 - 168135 6.8 194 81 Op 2 . + CDS 168267 - 168713 527 ## COG3600 Uncharacterized phage-associated protein 195 81 Op 3 . + CDS 168688 - 169152 181 ## Selsp_2097 hypothetical protein + Term 169156 - 169198 6.1 + TRNA 169197 - 169270 89.6 # Met CAT 0 0 - Term 169415 - 169450 4.3 196 82 Op 1 . - CDS 169482 - 170249 465 ## SaurJH9_1877 hypothetical protein 197 82 Op 2 . - CDS 170278 - 170721 209 ## LEGAS_0833 hypothetical protein - Prom 170742 - 170801 7.7 - Term 170773 - 170814 -0.9 198 82 Op 3 . - CDS 170848 - 171096 215 ## EF1489 hypothetical protein - Prom 171206 - 171265 80.4 + Prom 171191 - 171250 80.3 199 83 Tu 1 . + CDS 171279 - 172616 246 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 172623 - 172654 3.4 - Term 172611 - 172642 3.4 200 84 Tu 1 . - CDS 172660 - 173670 927 ## COG0180 Tryptophanyl-tRNA synthetase - Prom 173859 - 173918 10.7 + Prom 173845 - 173904 7.0 201 85 Tu 1 . + CDS 174030 - 174428 403 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family + Term 174442 - 174487 3.4 + Prom 174673 - 174732 5.1 202 86 Tu 1 . + CDS 174771 - 175433 870 ## COG4862 Negative regulator of genetic competence, sporulation and motility + Term 175534 - 175602 13.5 + Prom 175465 - 175524 80.3 203 87 Op 1 7/0.000 + CDS 175667 - 176845 681 ## COG4469 Competence protein 204 87 Op 2 . + CDS 176893 - 178704 2259 ## COG1164 Oligoendopeptidase F + Term 178713 - 178757 13.2 - Term 178694 - 178752 15.9 205 88 Op 1 1/0.234 - CDS 178796 - 179455 631 ## COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 206 88 Op 2 . - CDS 179519 - 180097 671 ## COG4116 Uncharacterized protein conserved in bacteria - Prom 180121 - 180180 3.6 + Prom 180023 - 180082 6.5 207 89 Op 1 6/0.000 + CDS 180294 - 180968 691 ## COG2357 Uncharacterized protein conserved in bacteria 208 89 Op 2 7/0.000 + CDS 180981 - 181778 679 ## COG0061 Predicted sugar kinase 209 89 Op 3 1/0.234 + CDS 181786 - 182679 261 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 210 89 Op 4 . + CDS 182710 - 184071 1562 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) + Term 184138 - 184182 9.2 - Term 184125 - 184170 10.0 211 90 Tu 1 . - CDS 184189 - 184818 803 ## COG3142 Uncharacterized protein involved in copper resistance + Prom 184859 - 184918 3.2 212 91 Tu 1 . + CDS 184948 - 185793 639 ## COG0500 SAM-dependent methyltransferases + Term 185990 - 186029 0.3 + Prom 185952 - 186011 11.6 213 92 Tu 1 . + CDS 186106 - 186612 581 ## COG0219 Predicted rRNA methylase (SpoU class) + Term 186688 - 186744 11.1 + Prom 186623 - 186682 4.9 214 93 Op 1 1/0.234 + CDS 186830 - 187039 165 ## COG0406 Fructose-2,6-bisphosphatase 215 93 Op 2 1/0.234 + CDS 187036 - 187473 509 ## COG0406 Fructose-2,6-bisphosphatase 216 93 Op 3 . + CDS 187500 - 190109 2883 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member + Term 190120 - 190164 13.2 - Term 190102 - 190158 13.1 217 94 Tu 1 . - CDS 190176 - 191135 849 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Prom 191158 - 191217 6.1 218 95 Op 1 . - CDS 191445 - 192575 436 ## COG0582 Integrase 219 95 Op 2 . - CDS 192587 - 193003 169 ## gi|227519605|ref|ZP_03949654.1| hypothetical protein HMPREF0348_2588 220 95 Op 3 . - CDS 193065 - 193850 475 ## gi|227519606|ref|ZP_03949655.1| hypothetical protein HMPREF0348_2589 221 95 Op 4 5/0.000 - CDS 193868 - 194347 288 ## COG2856 Predicted Zn peptidase 222 95 Op 5 . - CDS 194363 - 194797 437 ## COG1396 Predicted transcriptional regulators - Prom 194833 - 194892 8.8 + Prom 194830 - 194889 8.2 223 96 Op 1 . + CDS 195090 - 195308 344 ## gi|227519609|ref|ZP_03949658.1| hypothetical protein HMPREF0348_2592 224 96 Op 2 . + CDS 195320 - 195637 351 ## gi|227519610|ref|ZP_03949659.1| hypothetical protein HMPREF0348_2593 225 96 Op 3 . + CDS 195657 - 195935 327 ## LCABL_09620 hypothetical protein + Prom 196237 - 196296 43.6 226 97 Tu 1 . + CDS 196337 - 196495 129 ## EF2037 antirepressor, putative + Term 196540 - 196583 -0.3 - Term 196504 - 196534 1.3 227 98 Tu 1 . - CDS 196535 - 196717 150 ## EF2036 hypothetical protein - Prom 196754 - 196813 9.5 + Prom 196499 - 196558 8.0 228 99 Op 1 . + CDS 196771 - 196965 183 ## gi|227519614|ref|ZP_03949663.1| hypothetical protein HMPREF0348_2597 229 99 Op 2 . + CDS 196956 - 197141 291 ## gi|227519615|ref|ZP_03949664.1| hypothetical protein HMPREF0348_2598 230 99 Op 3 . + CDS 197184 - 197507 354 ## gi|227519616|ref|ZP_03949665.1| hypothetical protein HMPREF0348_2599 231 99 Op 4 . + CDS 197507 - 197734 207 ## EF2843 hypothetical protein 232 99 Op 5 . + CDS 197734 - 197832 183 ## 233 99 Op 6 . + CDS 197829 - 198104 295 ## gi|227519618|ref|ZP_03949667.1| hypothetical protein HMPREF0348_2601 + Term 198145 - 198182 -0.9 234 100 Op 1 . - CDS 198066 - 198320 86 ## gi|315168764|gb|EFU12781.1| hypothetical protein HMPREF9517_00575 235 100 Op 2 . - CDS 198380 - 198442 62 ## - Prom 198471 - 198530 4.2 + Prom 198430 - 198489 6.7 236 101 Op 1 3/0.106 + CDS 198515 - 199456 800 ## COG5377 Phage-related protein, predicted endonuclease 237 101 Op 2 . + CDS 199459 - 200349 1011 ## COG3723 Recombinational DNA repair protein (RecE pathway) 238 101 Op 3 . + CDS 200363 - 201325 566 ## EF2130 DnaD domain-containing protein 239 101 Op 4 . + CDS 201325 - 201624 418 ## SH1788 hypothetical protein 240 101 Op 5 . + CDS 201642 - 202067 325 ## COG4570 Holliday junction resolvase 241 101 Op 6 . + CDS 202064 - 202825 613 ## EF1437 hypothetical protein 242 101 Op 7 . + CDS 202818 - 202961 60 ## + Prom 203175 - 203234 5.0 243 102 Op 1 . + CDS 203399 - 203605 254 ## EF2123 hypothetical protein 244 102 Op 2 . + CDS 203609 - 203803 364 ## gi|257415553|ref|ZP_05592547.1| predicted protein 245 102 Op 3 . + CDS 203816 - 204040 309 ## EF2121 hypothetical protein 246 102 Op 4 . + CDS 204007 - 204096 105 ## 247 102 Op 5 . + CDS 204093 - 204332 398 ## gi|227519629|ref|ZP_03949678.1| hypothetical protein HMPREF0348_2612 248 102 Op 6 . + CDS 204333 - 204611 399 ## EF2120 hypothetical protein 249 102 Op 7 . + CDS 204624 - 205079 388 ## EF2119 hypothetical protein 250 102 Op 8 . + CDS 205079 - 205582 609 ## EF2118 hypothetical protein 251 102 Op 9 . + CDS 205589 - 205738 163 ## + Term 205786 - 205819 3.1 + Prom 206390 - 206449 80.3 252 103 Tu 1 . + CDS 206552 - 206740 82 ## EF2024 ArpU family transcriptional regulator + Term 206752 - 206805 0.6 + Prom 207650 - 207709 4.8 253 104 Tu 1 . + CDS 207797 - 207883 62 ## + Term 207965 - 207997 3.1 + Prom 208187 - 208246 7.0 254 105 Tu 1 . + CDS 208450 - 208680 241 ## EF2021 hypothetical protein + Prom 209657 - 209716 80.4 255 106 Op 1 . + CDS 209768 - 210313 435 ## EF2017 terminase, large subunit, putative 256 106 Op 2 . + CDS 210326 - 211861 1266 ## SPs0431 hypothetical protein 257 106 Op 3 . + CDS 211839 - 212765 739 ## COG5585 NAD+--asparagine ADP-ribosyltransferase + Prom 212771 - 212830 2.5 258 107 Op 1 . + CDS 212893 - 213507 828 ## LACR_2103 hypothetical protein 259 107 Op 2 . + CDS 213525 - 214460 1227 ## SPs0436 major head protein (phage associated) 260 107 Op 3 . + CDS 214460 - 214522 86 ## 261 107 Op 4 . + CDS 214531 - 214902 218 ## Spy49_0775 hypothetical phage associated protein SpyM3_1428 262 107 Op 5 . + CDS 214899 - 215180 210 ## MGAS2096_Spy1458 phage protein 263 107 Op 6 . + CDS 215177 - 215521 417 ## MGAS2096_Spy1457 phage protein 264 107 Op 7 . + CDS 215526 - 215876 271 ## GALLO_0460 phage unknown protein 265 107 Op 8 . + CDS 215891 - 216532 902 ## LEGAS_1582 phage major tail protein 266 107 Op 9 . + CDS 216553 - 216735 382 ## gi|227519645|ref|ZP_03949694.1| hypothetical protein HMPREF0348_2628 + Term 216753 - 216792 7.0 267 108 Op 1 . + CDS 216807 - 217280 410 ## GALLO_0462 phage unknown protein 268 108 Op 2 . + CDS 217322 - 217591 84 ## gi|227519647|ref|ZP_03949696.1| hypothetical protein HMPREF0348_2630 269 108 Op 3 . + CDS 217600 - 221481 3699 ## MGAS2096_Spy1452 phage protein 270 108 Op 4 . + CDS 221494 - 222333 677 ## SPs0445 hypothetical protein 271 108 Op 5 . + CDS 222356 - 225280 2283 ## SEQ_2046 phage protein 272 108 Op 6 . + CDS 225292 - 225612 462 ## gi|227519651|ref|ZP_03949700.1| hypothetical protein HMPREF0348_2634 273 108 Op 7 . + CDS 225615 - 225884 440 ## gi|227519652|ref|ZP_03949701.1| hypothetical protein HMPREF0348_2635 274 108 Op 8 . + CDS 225925 - 226155 294 ## gi|227519653|ref|ZP_03949702.1| hypothetical protein HMPREF0348_2636 275 108 Op 9 . + CDS 226148 - 226387 302 ## COG5546 Small integral membrane protein 276 108 Op 10 . + CDS 226409 - 227152 791 ## SH2336 hypothetical protein + Term 227298 - 227337 5.2 + Prom 228113 - 228172 2.2 277 109 Tu 1 . + CDS 228205 - 228738 364 ## lmo2277 hypothetical protein + Term 228837 - 228883 9.8 + TRNA 228759 - 228832 90.2 # Met CAT 0 0 + Prom 228761 - 228820 76.8 278 110 Tu 1 . + CDS 228933 - 229139 195 ## gi|227519657|ref|ZP_03949706.1| hypothetical protein HMPREF0348_2640 - Term 228830 - 228866 0.4 279 111 Tu 1 . - CDS 229106 - 230074 310 ## BPUM_0553 hypothetical protein - Prom 230120 - 230179 6.5 + Prom 230383 - 230442 9.6 280 112 Op 1 . + CDS 230583 - 231089 453 ## COG4708 Predicted membrane protein + Term 231145 - 231190 -0.4 + Prom 231225 - 231284 7.2 281 112 Op 2 . + CDS 231327 - 232532 1112 ## COG2348 Uncharacterized protein involved in methicillin resistance + Term 232540 - 232595 10.1 - Term 232528 - 232581 13.5 282 113 Op 1 3/0.106 - CDS 232588 - 233223 678 ## COG4684 Predicted membrane protein 283 113 Op 2 3/0.106 - CDS 233227 - 233781 573 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 284 113 Op 3 . - CDS 233778 - 234551 962 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 285 113 Op 4 . - CDS 234567 - 235559 1444 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 235648 - 235707 5.5 + Prom 235687 - 235746 7.3 286 114 Op 1 4/0.043 + CDS 235823 - 236365 655 ## COG1396 Predicted transcriptional regulators 287 114 Op 2 30/0.000 + CDS 236391 - 237476 1356 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 288 114 Op 3 36/0.000 + CDS 237495 - 238301 848 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 289 114 Op 4 25/0.000 + CDS 238301 - 239137 821 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 290 114 Op 5 . + CDS 239134 - 240207 1297 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Term 240234 - 240286 17.3 + Prom 240275 - 240334 6.6 291 115 Tu 1 . + CDS 240357 - 241040 563 ## EF2648 hypothetical protein + Prom 241063 - 241122 6.2 292 116 Op 1 6/0.000 + CDS 241149 - 242441 1320 ## COG2610 H+/gluconate symporter and related permeases 293 116 Op 2 1/0.234 + CDS 242463 - 243611 1476 ## COG1929 Glycerate kinase + Term 243672 - 243740 12.2 + Prom 243620 - 243679 3.8 294 117 Tu 1 . + CDS 243753 - 244766 851 ## COG3835 Sugar diacid utilization regulator + Prom 244789 - 244848 8.4 295 118 Tu 1 . + CDS 244889 - 245791 1050 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase + Term 245809 - 245863 2.7 + Prom 245845 - 245904 4.8 296 119 Tu 1 . + CDS 245935 - 246645 791 ## COG3597 Uncharacterized protein/domain associated with GTPases + Term 246824 - 246860 4.1 - Term 246855 - 246897 13.5 297 120 Op 1 16/0.000 - CDS 246930 - 248639 1993 ## COG4176 ABC-type proline/glycine betaine transport system, permease component 298 120 Op 2 1/0.234 - CDS 248632 - 249822 1455 ## COG4175 ABC-type proline/glycine betaine transport system, ATPase component - Prom 249962 - 250021 12.4 - Term 249973 - 250014 3.6 299 121 Op 1 . - CDS 250023 - 250655 585 ## COG2188 Transcriptional regulators 300 121 Op 2 . - CDS 250670 - 252616 1936 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Prom 252735 - 252794 6.3 301 122 Tu 1 . + CDS 252830 - 253480 821 ## COG2344 AT-rich DNA-binding protein + Term 253487 - 253535 11.1 - Term 253474 - 253522 9.2 302 123 Op 1 . - CDS 253523 - 254176 594 ## COG1266 Predicted metal-dependent membrane protease 303 123 Op 2 . - CDS 254195 - 254371 220 ## EF2636 hypothetical protein - Prom 254575 - 254634 6.7 + Prom 254519 - 254578 6.3 304 124 Op 1 41/0.000 + CDS 254604 - 254888 418 ## COG0234 Co-chaperonin GroES (HSP10) 305 124 Op 2 . + CDS 254946 - 256571 1605 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 256593 - 256628 5.3 + Prom 256767 - 256826 12.6 306 125 Op 1 . + CDS 256876 - 257595 702 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 307 125 Op 2 . + CDS 257619 - 258074 509 ## EF2629 hypothetical protein 308 125 Op 3 . + CDS 258059 - 258205 98 ## 309 125 Op 4 . + CDS 258222 - 259769 1345 ## COG1705 Muramidase (flagellum-specific) + Term 259814 - 259876 27.1 + Prom 259849 - 259908 7.7 310 126 Op 1 . + CDS 259988 - 260398 215 ## COG2246 Predicted membrane protein 311 126 Op 2 5/0.000 + CDS 260476 - 261960 1421 ## COG1488 Nicotinic acid phosphoribosyltransferase 312 126 Op 3 . + CDS 261963 - 262790 1171 ## COG0171 NAD synthase + Term 262794 - 262838 9.0 + Prom 262871 - 262930 80.3 313 127 Op 1 . + CDS 263092 - 264897 1947 ## COG2217 Cation transport ATPase + Prom 264908 - 264967 2.9 314 127 Op 2 5/0.000 + CDS 264989 - 265273 382 ## COG3592 Uncharacterized conserved protein 315 127 Op 3 . + CDS 265263 - 265538 415 ## COG2388 Predicted acetyltransferase + Term 265554 - 265602 12.7 + Prom 265597 - 265656 4.9 316 128 Tu 1 . + CDS 265706 - 265942 363 ## COG1314 Preprotein translocase subunit SecG + Term 265972 - 266021 12.4 + Prom 266007 - 266066 5.5 317 129 Op 1 4/0.043 + CDS 266097 - 266861 850 ## COG1647 Esterase/lipase 318 129 Op 2 10/0.000 + CDS 266861 - 269230 1620 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 319 129 Op 3 . + CDS 269243 - 269707 592 ## COG0691 tmRNA-binding protein 320 129 Op 4 . + CDS 269786 - 269887 67 ## + Prom 269890 - 269949 2.9 321 130 Op 1 40/0.000 + CDS 270010 - 270729 629 ## COG0356 F0F1-type ATP synthase, subunit a 322 130 Op 2 37/0.000 + CDS 270778 - 270999 417 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K + Term 271010 - 271063 4.0 323 130 Op 3 38/0.000 + CDS 271137 - 271667 736 ## COG0711 F0F1-type ATP synthase, subunit b 324 130 Op 4 41/0.000 + CDS 271654 - 272196 676 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 325 130 Op 5 42/0.000 + CDS 272225 - 273781 2203 ## COG0056 F0F1-type ATP synthase, alpha subunit 326 130 Op 6 42/0.000 + CDS 273797 - 274705 1073 ## COG0224 F0F1-type ATP synthase, gamma subunit + Term 274714 - 274763 8.1 327 130 Op 7 42/0.000 + CDS 274780 - 276186 1891 ## COG0055 F0F1-type ATP synthase, beta subunit 328 130 Op 8 . + CDS 276203 - 276622 639 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 276628 - 276656 -0.0 + Prom 276716 - 276775 6.1 329 131 Tu 1 . + CDS 276812 - 277048 176 ## EF2606 hypothetical protein + Prom 277050 - 277109 6.2 330 132 Op 1 . + CDS 277151 - 278452 1733 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 331 132 Op 2 . + CDS 278466 - 278642 310 ## EF2604 hypothetical protein + Term 278656 - 278705 8.5 + Prom 278682 - 278741 9.5 332 133 Op 1 . + CDS 278770 - 279138 437 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 333 133 Op 2 . + CDS 279143 - 280312 1432 ## COG0628 Predicted permease + Term 280318 - 280360 9.1 - Term 280305 - 280347 9.1 334 134 Tu 1 . - CDS 280374 - 281000 809 ## COG1182 Acyl carrier protein phosphodiesterase - Prom 281121 - 281180 8.7 + Prom 281078 - 281137 16.2 335 135 Op 1 7/0.000 + CDS 281302 - 282144 925 ## COG3711 Transcriptional antiterminator + Prom 282208 - 282267 1.9 336 135 Op 2 8/0.000 + CDS 282307 - 284187 2242 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 337 135 Op 3 . + CDS 284212 - 285657 1635 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 285731 - 285780 15.5 + Prom 285674 - 285733 5.7 338 136 Tu 1 . + CDS 285839 - 286408 659 ## COG0194 Guanylate kinase + Term 286413 - 286471 9.1 + Prom 286456 - 286515 9.3 339 137 Op 1 . + CDS 286556 - 286765 333 ## COG1309 Transcriptional regulator 340 137 Op 2 . + CDS 286842 - 287231 264 ## EF2594 TetR family transcriptional regulator 341 137 Op 3 . + CDS 287252 - 288979 185 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 342 137 Op 4 . + CDS 288976 - 289074 229 ## 343 137 Op 5 . + CDS 289092 - 290846 212 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Prom 290904 - 290963 7.7 344 138 Tu 1 . + CDS 291032 - 291877 944 ## COG2514 Predicted ring-cleavage extradiol dioxygenase + Term 291927 - 291972 0.3 + Prom 291921 - 291980 3.8 345 139 Op 1 . + CDS 292007 - 293050 861 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 346 139 Op 2 . + CDS 293092 - 294063 1211 ## COG1482 Phosphomannose isomerase + Term 294069 - 294109 7.0 - Term 294057 - 294096 -0.8 347 140 Op 1 . - CDS 294118 - 294663 493 ## EF2588 hypothetical protein 348 140 Op 2 . - CDS 294666 - 295640 837 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase - Prom 295784 - 295843 5.5 - Term 295826 - 295874 8.5 349 141 Op 1 10/0.000 - CDS 295877 - 296566 968 ## COG3442 Predicted glutamine amidotransferase 350 141 Op 2 . - CDS 296559 - 297911 1539 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase - Prom 297964 - 298023 11.5 - Term 298059 - 298105 8.0 351 142 Tu 1 . - CDS 298117 - 298755 663 ## COG2964 Uncharacterized protein conserved in bacteria - Prom 298897 - 298956 5.8 + Prom 298936 - 298995 11.1 352 143 Op 1 1/0.234 + CDS 299157 - 300491 1620 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 353 143 Op 2 1/0.234 + CDS 300522 - 303527 2872 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 354 143 Op 3 . + CDS 303557 - 304930 1030 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 355 143 Op 4 4/0.043 + CDS 304954 - 306147 1227 ## COG1171 Threonine dehydratase 356 143 Op 5 . + CDS 306153 - 307463 1546 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 357 143 Op 6 8/0.000 + CDS 307502 - 308695 1501 ## COG0078 Ornithine carbamoyltransferase + Prom 308858 - 308917 2.3 358 143 Op 7 . + CDS 308937 - 309881 1119 ## COG0549 Carbamate kinase 359 143 Op 8 . + CDS 309896 - 310276 434 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 310303 - 310349 -0.5 + Prom 310282 - 310341 6.5 360 144 Op 1 . + CDS 310370 - 311689 404 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 311704 - 311743 5.3 361 144 Op 2 . + CDS 311783 - 312142 307 ## COG2005 N-terminal domain of molybdenum-binding protein 362 144 Op 3 6/0.000 + CDS 312139 - 313146 859 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family + Term 313177 - 313218 -0.9 + Prom 313168 - 313227 6.0 363 144 Op 4 1/0.234 + CDS 313267 - 315840 2300 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 364 144 Op 5 . + CDS 315854 - 316435 705 ## COG2068 Uncharacterized MobA-related protein 365 144 Op 6 . + CDS 316449 - 317597 1136 ## COG0520 Selenocysteine lyase 366 144 Op 7 . + CDS 317613 - 318635 926 ## COG0709 Selenophosphate synthase 367 144 Op 8 . + CDS 318651 - 319238 686 ## EF2566 hypothetical protein 368 144 Op 9 . + CDS 319259 - 319516 169 ## EF2565 hypothetical protein 369 144 Op 10 . + CDS 319504 - 320259 451 ## EF2564 hypothetical protein 370 144 Op 11 . + CDS 320223 - 321053 816 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family + Term 321235 - 321272 0.9 + Prom 321156 - 321215 8.2 371 145 Op 1 . + CDS 321294 - 321752 613 ## COG0716 Flavodoxins 372 145 Op 2 5/0.000 + CDS 321808 - 322647 932 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 373 145 Op 3 . + CDS 322640 - 324058 1469 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 374 145 Op 4 . + CDS 324079 - 327612 3707 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit + Term 327618 - 327655 6.4 - Term 327604 - 327643 6.0 375 146 Tu 1 . - CDS 327649 - 329064 1065 ## COG0168 Trk-type K+ transport systems, membrane components + Prom 329316 - 329375 7.3 376 147 Tu 1 . + CDS 329434 - 330951 2106 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 330965 - 331012 10.3 + Prom 331005 - 331064 4.8 377 148 Op 1 3/0.106 + CDS 331178 - 331762 554 ## COG1435 Thymidine kinase 378 148 Op 2 32/0.000 + CDS 331774 - 332847 1436 ## COG0216 Protein chain release factor A 379 148 Op 3 10/0.000 + CDS 332840 - 333673 239 ## PROTEIN SUPPORTED gi|169796031|ref|YP_001713824.1| putative adenine-specific methylase 380 148 Op 4 1/0.234 + CDS 333717 - 334739 1277 ## COG0009 Putative translation factor (SUA5) 381 148 Op 5 5/0.000 + CDS 334815 - 336053 1467 ## COG0112 Glycine/serine hydroxymethyltransferase + Term 336099 - 336150 6.3 + Prom 336100 - 336159 6.8 382 148 Op 6 . + CDS 336185 - 336814 909 ## COG0035 Uracil phosphoribosyltransferase + Term 336825 - 336868 7.1 + Prom 336840 - 336899 9.8 383 149 Tu 1 . + CDS 336920 - 337192 283 ## EF2548 hypothetical protein + Term 337341 - 337378 1.2 384 150 Tu 1 . - CDS 337266 - 337502 234 ## EF2547 hypothetical protein - Prom 337678 - 337737 74.3 + TRNA 337661 - 337733 75.8 # Thr CGT 0 0 - Term 337732 - 337777 15.3 385 151 Op 1 9/0.000 - CDS 337783 - 338109 310 ## COG4392 Predicted membrane protein 386 151 Op 2 . - CDS 338096 - 338803 740 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 387 151 Op 3 . - CDS 338800 - 338901 138 ## - Prom 339007 - 339066 9.8 + Prom 338893 - 338952 8.7 388 152 Op 1 . + CDS 339017 - 339568 549 ## COG1396 Predicted transcriptional regulators + Prom 339589 - 339648 4.5 389 152 Op 2 . + CDS 339681 - 341012 779 ## EF2507 hypothetical protein + Term 341182 - 341249 29.3 390 153 Tu 1 . + CDS 341389 - 341595 272 ## EF2505 cell wall surface anchor family protein 391 154 Tu 1 . + CDS 341728 - 344616 2960 ## COG4932 Predicted outer membrane protein + Prom 345518 - 345577 80.3 392 155 Op 1 . + CDS 345758 - 346048 229 ## EF2505 cell wall surface anchor family protein + Prom 346107 - 346166 2.0 393 155 Op 2 . + CDS 346245 - 346946 554 ## EF2504 hypothetical protein 394 155 Op 3 . + CDS 346947 - 348383 1122 ## EF2503 hypothetical protein + Term 348513 - 348566 17.4 + Prom 348549 - 348608 9.8 395 156 Op 1 . + CDS 348666 - 348746 155 ## 396 156 Op 2 . + CDS 348751 - 349194 439 ## gi|227519776|ref|ZP_03949825.1| hypothetical protein HMPREF0348_2759 + Prom 349316 - 349375 7.1 397 157 Op 1 1/0.234 + CDS 349403 - 350590 1158 ## COG0772 Bacterial cell division membrane protein 398 157 Op 2 4/0.043 + CDS 350615 - 350974 423 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 399 157 Op 3 . + CDS 350971 - 351294 547 ## COG0509 Glycine cleavage system H protein (lipoate-binding) + Prom 351623 - 351682 8.0 400 158 Op 1 32/0.000 + CDS 351709 - 352746 1342 ## COG1135 ABC-type metal ion transport system, ATPase component 401 158 Op 2 22/0.000 + CDS 352739 - 353425 807 ## COG2011 ABC-type metal ion transport system, permease component 402 158 Op 3 . + CDS 353440 - 354258 1103 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Prom 354518 - 354577 9.0 403 159 Op 1 32/0.000 + CDS 354606 - 355421 731 ## COG0020 Undecaprenyl pyrophosphate synthase 404 159 Op 2 . + CDS 355418 - 356218 954 ## COG0575 CDP-diglyceride synthetase + Term 356256 - 356306 17.1 + Prom 356464 - 356523 9.1 405 160 Op 1 5/0.000 + CDS 356692 - 357861 781 ## COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 406 160 Op 2 11/0.000 + CDS 357880 - 359346 899 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 407 160 Op 3 1/0.234 + CDS 359415 - 361925 2464 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 408 160 Op 4 . + CDS 361993 - 364446 2373 ## COG0812 UDP-N-acetylmuramate dehydrogenase 409 160 Op 5 . + CDS 364464 - 364862 476 ## EF2488 putative lipoprotein 410 160 Op 6 . + CDS 364921 - 366060 1257 ## COG0562 UDP-galactopyranose mutase 411 160 Op 7 26/0.000 + CDS 366086 - 367429 1113 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 412 160 Op 8 . + CDS 367429 - 368241 701 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component + Term 368253 - 368304 13.1 + Prom 368784 - 368843 10.7 413 161 Op 1 . + CDS 368904 - 369554 749 ## COG2102 Predicted ATPases of PP-loop superfamily + Prom 369556 - 369615 4.8 414 161 Op 2 . + CDS 369642 - 369758 221 ## 415 161 Op 3 . + CDS 369724 - 369858 161 ## EF2483 hypothetical protein + Term 369887 - 369952 8.2 + Prom 369942 - 370001 9.2 416 162 Tu 1 . + CDS 370063 - 370794 585 ## COG0546 Predicted phosphatases + Term 370969 - 371035 30.0 - Term 370771 - 370807 1.2 417 163 Op 1 . - CDS 371016 - 372098 1012 ## gi|227519798|ref|ZP_03949847.1| hypothetical protein HMPREF0348_2781 - Prom 372122 - 372181 10.9 - Term 372166 - 372190 -1.0 418 163 Op 2 . - CDS 372219 - 372881 742 ## cpfrc_00619 hypothetical protein - Prom 372996 - 373055 9.1 - Term 372953 - 373011 7.2 419 164 Op 1 . - CDS 373077 - 373886 771 ## COG1512 Beta-propeller domains of methanol dehydrogenase type 420 164 Op 2 . - CDS 373883 - 375028 948 ## EF2478 hypothetical protein - Term 375069 - 375111 5.3 421 164 Op 3 . - CDS 375122 - 376354 1152 ## COG4260 Putative virion core protein (lumpy skin disease virus) - Prom 376473 - 376532 9.9 + Prom 376475 - 376534 4.5 422 165 Op 1 . + CDS 376562 - 378604 2320 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 + Term 378620 - 378666 7.1 423 165 Op 2 20/0.000 + CDS 378684 - 379439 285 ## PROTEIN SUPPORTED gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase 424 165 Op 3 2/0.170 + CDS 379411 - 379965 290 ## PROTEIN SUPPORTED gi|58336726|ref|YP_193311.1| ribosomal protein ala-acetyltransferase 425 165 Op 4 9/0.000 + CDS 379973 - 380437 196 ## PROTEIN SUPPORTED gi|119946836|ref|YP_944516.1| ribosomal-protein-alanine acetyltransferase 426 165 Op 5 . + CDS 380434 - 381480 715 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase + Term 381717 - 381769 18.0 + Prom 381719 - 381778 10.7 427 166 Op 1 . + CDS 381799 - 383490 2139 ## COG0018 Arginyl-tRNA synthetase + Prom 383549 - 383608 5.4 428 166 Op 2 . + CDS 383646 - 384146 584 ## COG1418 Predicted HD superfamily hydrolase + Term 384153 - 384186 3.1 - Term 384139 - 384172 3.1 429 167 Tu 1 . - CDS 384228 - 384551 303 ## EF2469 Cro/CI family transcriptional regulator - Prom 384623 - 384682 7.8 + Prom 384640 - 384699 9.5 430 168 Op 1 . + CDS 384739 - 385017 175 ## EF2467 hypothetical protein 431 168 Op 2 1/0.234 + CDS 385001 - 386608 1579 ## COG4932 Predicted outer membrane protein + Prom 386910 - 386969 80.3 432 169 Op 1 . + CDS 387089 - 388378 1144 ## COG4932 Predicted outer membrane protein 433 169 Op 2 . + CDS 388407 - 388550 206 ## EF2465 hypothetical protein + Term 388659 - 388701 7.4 + Prom 388719 - 388778 2.9 434 170 Tu 1 . + CDS 388809 - 389798 852 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis + Term 389907 - 389954 8.2 + Prom 389909 - 389968 4.3 435 171 Op 1 . + CDS 389995 - 391260 1136 ## COG0038 Chloride channel protein EriC 436 171 Op 2 2/0.170 + CDS 391310 - 391588 423 ## COG4476 Uncharacterized protein conserved in bacteria 437 171 Op 3 1/0.234 + CDS 391589 - 392371 974 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family + Term 392377 - 392418 3.4 + Prom 392479 - 392538 6.4 438 172 Op 1 . + CDS 392592 - 394427 2099 ## COG1217 Predicted membrane GTPase involved in stress response + Term 394435 - 394482 -0.4 439 172 Op 2 . + CDS 394502 - 395317 765 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Term 395342 - 395387 1.4 + Prom 395354 - 395413 3.9 440 173 Tu 1 . + CDS 395433 - 395495 80 ## + Prom 395550 - 395609 5.9 441 174 Tu 1 . + CDS 395635 - 397404 1913 ## COG0514 Superfamily II DNA helicase + Term 397528 - 397583 9.5 + Prom 397547 - 397606 10.0 442 175 Op 1 3/0.106 + CDS 397631 - 397936 435 ## COG4838 Uncharacterized protein conserved in bacteria 443 175 Op 2 4/0.043 + CDS 397940 - 399148 1288 ## COG0772 Bacterial cell division membrane protein 444 175 Op 3 . + CDS 399181 - 402609 3900 ## COG1038 Pyruvate carboxylase 445 175 Op 4 2/0.170 + CDS 402626 - 403750 931 ## COG2340 Uncharacterized protein with SCP/PR1 domains 446 175 Op 5 3/0.106 + CDS 403747 - 404181 222 ## PROTEIN SUPPORTED gi|163764796|ref|ZP_02171849.1| ribosomal protein S17 447 175 Op 6 2/0.170 + CDS 404171 - 404521 420 ## COG4471 Uncharacterized protein conserved in bacteria + Term 404523 - 404586 16.1 + Prom 404530 - 404589 7.3 448 176 Op 1 14/0.000 + CDS 404620 - 405174 720 ## COG0742 N6-adenine-specific methylase 449 176 Op 2 4/0.043 + CDS 405176 - 405667 334 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 450 176 Op 3 . + CDS 405672 - 406724 471 ## PROTEIN SUPPORTED gi|163764799|ref|ZP_02171852.1| ribosomal protein S12 + Term 406727 - 406785 19.5 + Prom 406734 - 406793 5.8 451 177 Tu 1 4/0.043 + CDS 406820 - 407464 687 ## COG1555 DNA uptake protein and related DNA-binding proteins + Prom 407467 - 407526 4.0 452 178 Tu 1 . + CDS 407587 - 408090 397 ## COG2131 Deoxycytidylate deaminase + Term 408099 - 408143 2.2 + Prom 408167 - 408226 3.9 453 179 Op 1 . + CDS 408260 - 409537 741 ## COG0658 Predicted membrane metal-binding protein 454 179 Op 2 4/0.043 + CDS 409543 - 410388 382 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) 455 179 Op 3 . + CDS 410446 - 411474 1194 ## COG1466 DNA polymerase III, delta subunit + Term 411475 - 411536 19.1 - Term 411462 - 411522 20.8 456 180 Tu 1 . - CDS 411526 - 412467 1221 ## COG1893 Ketopantoate reductase - Prom 412501 - 412560 6.7 + Prom 412508 - 412567 4.2 457 181 Tu 1 . + CDS 412657 - 413193 418 ## COG1607 Acyl-CoA hydrolase + Term 413199 - 413243 6.2 - Term 413232 - 413274 4.5 458 182 Tu 1 . - CDS 413280 - 413594 509 ## PROTEIN SUPPORTED gi|227519840|ref|ZP_03949889.1| ribosomal protein S20 - Prom 413669 - 413728 5.0 + Prom 413683 - 413742 7.3 459 183 Op 1 21/0.000 + CDS 413763 - 414776 940 ## COG0306 Phosphate/sulphate permeases 460 183 Op 2 . + CDS 414789 - 415412 853 ## COG1392 Phosphate transport regulator (distant homolog of PhoU) 461 183 Op 3 . + CDS 415431 - 416216 740 ## COG3394 Uncharacterized protein conserved in bacteria + Term 416219 - 416258 9.3 - Term 416200 - 416251 16.2 462 184 Tu 1 . - CDS 416255 - 417085 848 ## COG1968 Uncharacterized bacitracin resistance protein - Prom 417123 - 417182 10.8 + Prom 417127 - 417186 8.0 463 185 Tu 1 . + CDS 417267 - 417761 671 ## COG2190 Phosphotransferase system IIA components 464 186 Op 1 2/0.170 + CDS 418202 - 419311 1060 ## COG3589 Uncharacterized conserved protein 465 186 Op 2 9/0.000 + CDS 419286 - 420176 1189 ## COG2103 Predicted sugar phosphate isomerase 466 186 Op 3 3/0.106 + CDS 420199 - 421653 1937 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 421660 - 421704 5.1 + Prom 421655 - 421714 5.1 467 186 Op 4 . + CDS 421740 - 422588 1006 ## COG1737 Transcriptional regulators + Term 422596 - 422646 17.1 - Term 422577 - 422640 19.1 468 187 Op 1 1/0.234 - CDS 422644 - 423348 991 ## COG0406 Fructose-2,6-bisphosphatase 469 187 Op 2 . - CDS 423389 - 424015 717 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 424044 - 424103 7.2 + Prom 424150 - 424209 11.2 470 188 Op 1 4/0.043 + CDS 424235 - 425620 1616 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 471 188 Op 2 1/0.234 + CDS 425624 - 426955 358 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 427035 - 427076 4.0 + Prom 426958 - 427017 9.1 472 189 Tu 1 . + CDS 427097 - 428074 1271 ## COG0516 IMP dehydrogenase/GMP reductase + Term 428099 - 428158 17.7 + Prom 428129 - 428188 5.9 473 190 Op 1 . + CDS 428236 - 428568 214 ## PROTEIN SUPPORTED gi|18309686|ref|NP_561620.1| 30S ribosomal protein 474 190 Op 2 . + CDS 428565 - 429593 1029 ## EF2427 hypothetical protein + Term 429618 - 429670 13.1 + Prom 429636 - 429695 3.1 475 191 Tu 1 . + CDS 429728 - 431179 1375 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Prom 431210 - 431269 9.5 476 192 Op 1 . + CDS 431300 - 433024 2279 ## COG1109 Phosphomannomutase + Term 433066 - 433119 14.1 477 192 Op 2 . + CDS 433131 - 433913 1004 ## COG0345 Pyrroline-5-carboxylate reductase + Term 433919 - 433972 9.0 + Prom 433972 - 434031 3.6 478 193 Op 1 . + CDS 434051 - 434338 381 ## COG0640 Predicted transcriptional regulators 479 193 Op 2 11/0.000 + CDS 434390 - 435682 1499 ## COG0460 Homoserine dehydrogenase 480 193 Op 3 19/0.000 + CDS 435685 - 436740 1437 ## COG0498 Threonine synthase 481 193 Op 4 . + CDS 436737 - 437600 904 ## COG0083 Homoserine kinase + Term 437607 - 437648 9.2 - Term 437595 - 437636 9.2 482 194 Tu 1 . - CDS 437644 - 438501 814 ## COG1806 Uncharacterized protein conserved in bacteria - Prom 438531 - 438590 6.5 + Prom 438490 - 438549 5.4 483 195 Tu 1 . + CDS 438606 - 439040 416 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Prom 439057 - 439116 3.6 484 196 Op 1 9/0.000 + CDS 439143 - 439382 400 ## PROTEIN SUPPORTED gi|227519866|ref|ZP_03949915.1| 30S ribosomal protein S21 485 196 Op 2 1/0.234 + CDS 439408 - 439857 420 ## PROTEIN SUPPORTED gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 + Term 439868 - 439909 9.0 + Prom 439951 - 440010 6.0 486 197 Op 1 4/0.043 + CDS 440040 - 441014 1243 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 487 197 Op 2 7/0.000 + CDS 441043 - 443241 992 ## PROTEIN SUPPORTED gi|163762592|ref|ZP_02169656.1| ribosomal protein S21 488 197 Op 3 11/0.000 + CDS 443241 - 443720 680 ## COG0319 Predicted metal-dependent hydrolase 489 197 Op 4 3/0.106 + CDS 443698 - 444105 412 ## COG0818 Diacylglycerol kinase 490 197 Op 5 16/0.000 + CDS 444119 - 445021 1175 ## COG1159 GTPase + Term 445026 - 445086 4.1 491 197 Op 6 3/0.106 + CDS 445104 - 445898 722 ## COG1381 Recombinational DNA repair protein (RecF pathway) + Term 446129 - 446171 9.0 + Prom 446554 - 446613 6.3 492 198 Op 1 19/0.000 + CDS 446667 - 447575 1038 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 493 198 Op 2 . + CDS 447577 - 449661 2727 ## COG0751 Glycyl-tRNA synthetase, beta subunit 494 198 Op 3 . + CDS 449701 - 449892 265 ## gi|227519876|ref|ZP_03949925.1| conserved hypothetical protein + Term 450015 - 450056 -0.9 - Term 449885 - 449919 1.0 495 199 Tu 1 . - CDS 449925 - 450857 1103 ## COG0706 Preprotein translocase subunit YidC - Prom 450889 - 450948 6.5 - Term 450900 - 450942 2.2 496 200 Tu 1 . - CDS 451024 - 451299 428 ## COG1254 Acylphosphatases - Prom 451421 - 451480 6.4 497 201 Op 1 . + CDS 451406 - 452182 206 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 498 201 Op 2 . + CDS 452202 - 452639 550 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 452700 - 452737 -1.0 + Prom 452641 - 452700 5.3 499 202 Op 1 38/0.000 + CDS 452823 - 453608 1336 ## PROTEIN SUPPORTED gi|29376895|ref|NP_816049.1| 30S ribosomal protein S2 + Term 453622 - 453683 2.4 + Prom 453630 - 453689 2.3 500 202 Op 2 24/0.000 + CDS 453714 - 454595 582 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts + Term 454714 - 454756 3.1 + Prom 454682 - 454741 3.5 501 202 Op 3 33/0.000 + CDS 454856 - 455578 1010 ## COG0528 Uridylate kinase 502 202 Op 4 . + CDS 455582 - 456139 925 ## COG0233 Ribosome recycling factor + Term 456164 - 456204 3.4 + Prom 456250 - 456309 12.1 503 203 Op 1 41/0.000 + CDS 456509 - 457279 194 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 504 203 Op 2 24/0.000 + CDS 457294 - 458580 1587 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 505 203 Op 3 19/0.000 + CDS 458577 - 459812 1476 ## COG0520 Selenocysteine lyase 506 203 Op 4 6/0.000 + CDS 459799 - 460266 621 ## COG0822 NifU homolog involved in Fe-S cluster formation 507 203 Op 5 . + CDS 460285 - 461679 1585 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component + Term 461690 - 461738 6.2 + Prom 462341 - 462400 6.4 508 204 Op 1 . + CDS 462429 - 463271 579 ## COG1192 ATPases involved in chromosome partitioning 509 204 Op 2 . + CDS 463264 - 463614 259 ## EF2386 hypothetical protein 510 204 Op 3 . + CDS 463619 - 464491 178 ## EF2385 hypothetical protein + Term 464721 - 464788 6.0 - Term 464710 - 464771 3.6 511 205 Op 1 . - CDS 464791 - 465393 711 ## COG2364 Predicted membrane protein - Prom 465417 - 465476 3.2 - Term 465422 - 465471 11.5 512 205 Op 2 . - CDS 465478 - 466257 245 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 466287 - 466346 2.3 + Prom 466124 - 466183 4.5 513 206 Tu 1 . + CDS 466294 - 466389 102 ## + Term 466545 - 466590 6.3 + Prom 466455 - 466514 6.0 514 207 Op 1 7/0.000 + CDS 466674 - 467942 1341 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 515 207 Op 2 5/0.000 + CDS 468014 - 469732 2270 ## COG0442 Prolyl-tRNA synthetase + Term 469794 - 469843 14.1 + Prom 469839 - 469898 7.9 516 208 Tu 1 . + CDS 469983 - 474338 4561 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) + Term 474360 - 474399 5.0 + Prom 474453 - 474512 9.7 517 209 Op 1 . + CDS 474550 - 476007 1501 ## COG0531 Amino acid transporters + Term 476052 - 476100 12.5 + Prom 476065 - 476124 5.5 518 209 Op 2 . + CDS 476226 - 477539 1237 ## EF2376 hypothetical protein + Term 477592 - 477641 14.1 + Prom 477655 - 477714 5.3 519 210 Tu 1 2/0.170 + CDS 477738 - 480509 2349 ## COG1199 Rad3-related DNA helicases + Prom 480513 - 480572 5.7 520 211 Op 1 5/0.000 + CDS 480597 - 481103 549 ## COG5353 Uncharacterized protein conserved in bacteria 521 211 Op 2 5/0.000 + CDS 481142 - 482341 1199 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 522 211 Op 3 . + CDS 482376 - 483710 1462 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases + Term 483719 - 483773 13.2 - Term 483716 - 483751 5.1 523 212 Tu 1 . - CDS 483758 - 484717 1052 ## COG0673 Predicted dehydrogenases and related proteins - Prom 484760 - 484819 9.3 + Prom 484722 - 484781 7.7 524 213 Op 1 . + CDS 484890 - 485408 683 ## EF2369 hypothetical protein 525 213 Op 2 . + CDS 485429 - 485647 254 ## 526 213 Op 3 . + CDS 485692 - 485763 56 ## 527 213 Op 4 . + CDS 485747 - 486388 701 ## COG1705 Muramidase (flagellum-specific) 528 213 Op 5 . + CDS 486408 - 487040 937 ## EF2366 hypothetical protein + Prom 487456 - 487515 2.4 529 214 Op 1 7/0.000 + CDS 487547 - 488128 807 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 530 214 Op 2 . + CDS 488131 - 489450 432 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 489469 - 489502 -0.9 + Prom 489475 - 489534 3.3 531 215 Op 1 . + CDS 489647 - 489751 61 ## 532 215 Op 2 3/0.106 + CDS 489778 - 490893 1245 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 533 215 Op 3 . + CDS 490936 - 492231 1699 ## COG0015 Adenylosuccinate lyase + Term 492235 - 492280 9.0 Predicted protein(s) >gi|237663595|gb|GG668923.1| GENE 1 191 - 1195 996 334 aa, chain + ## HITS:1 COG:L189090 KEGG:ns NR:ns ## COG: L189090 COG0438 # Protein_GI_number: 15674119 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Lactococcus lactis # 1 333 1 330 332 374 55.0 1e-103 MKILLYFEGEKILAKSGIGRALDHQKRALSEVGIEYTLDADCSDYDILHINTYGINSHRM VRKARKLGKKVIYHAHSTEEDFRNSFIGSNQLAPLVKKYLISLYSKADHLITPTPYSKTL LEGYGIKVPISAISNGIDLSRFYPSEEKEQKFREYFKIDEEKKVIICVGLFFERKGITDF IEVARQLPEYQFIWFGDTPMYSIPKNIRQLVKEDHPENVIFPGYIKGDVIEGAYAAANLF FFPSREETEGIVVLEALASQQQVLVRDIPVYQGWLVANENCYMGHSIEEFKKYIEGLLEG KIPSTRQAGYQVAEQRSIKQIGYELKEVYETVLS >gi|237663595|gb|GG668923.1| GENE 2 1242 - 2465 1362 407 aa, chain + ## HITS:1 COG:L190226 KEGG:ns NR:ns ## COG: L190226 COG0438 # Protein_GI_number: 15674120 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Lactococcus lactis # 1 386 1 386 446 432 57.0 1e-121 MKIGFFTDTYFPQVSGVATSIKTLKDELEKHGHEVYIFTTTDPNATDFEEDVIRMPSVPF VSFKDRRVVVRGMWYAYLIAKELELDLIHTHTEFGAGILGKMVGKKMKIPVIHTYHTMYE DYLHYIAKGKVVRPSHVKFFSRVFTNHTTGVVCPSERVIEKLRDYGVTAPMRIIPTGIEI DKFLRPDITEEMIAGMRQQLGIEEQQIMLLSLSRISYEKNIQAIIQGLPQIIEKLPQTRL VIVGNGPYLEDLKELAEELEVSEYVQFTGEVPNEEVAIYYKAADYFVSASTSETQGLTYT EAMAAGVQCVAEGNAYLNNLFDHESLGKTFKTDSDFAPTLIDYIQANIKMDQTILDEKLF EISSTNFGNKMIEFYQDTLIYFDQLQMEKENADSIKKIKVKFTSLRK >gi|237663595|gb|GG668923.1| GENE 3 2538 - 3428 1091 296 aa, chain + ## HITS:1 COG:L81616 KEGG:ns NR:ns ## COG: L81616 COG2084 # Protein_GI_number: 15674197 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Lactococcus lactis # 1 292 1 292 293 369 63.0 1e-102 MSKIGFIGTGVMGKSIIRNMMKNNLSVNVYNRTKSKTDDLVAEGAVWYDTPKAIAEASDI IFTMVGFPSDVEGVYFNETGIFQADLTGKIVVDLTTSTPTLAEKIAKKAAEVGAHALDSP VSGGDLGAKNGTLTIMVGGDQESYETVLPIFKTFGKTFMLHGSAGKGQHTKMANQLMIAG TMTGLTEMLVYANATGLTLEKVLETVGGGSAANWSLSNYGPRILKEDYTPGFFVKHFIKD LKIALDEAKKLDLTLPATQKATELYESLADKGFENDGTQALIKLWWTDGKQPTNKN >gi|237663595|gb|GG668923.1| GENE 4 3529 - 3759 310 76 aa, chain + ## HITS:1 COG:no KEGG:EF2888 NR:ns ## KEGG: EF2888 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 76 1 76 76 121 100.0 8e-27 MKHSQLVAIIKRLEAMIEAADNEVQVRRFEREGVEKCIVSFDKSTETFELTESDTHQSYQ FDNIDIVAMEIYDLIQ >gi|237663595|gb|GG668923.1| GENE 5 4149 - 4589 508 146 aa, chain + ## HITS:1 COG:CAC3579 KEGG:ns NR:ns ## COG: CAC3579 COG1846 # Protein_GI_number: 15896813 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 1 144 1 144 154 156 59.0 1e-38 MEPNLETVNDYLVSVFNDILTIEESELKKSQFNDLSITEMHTIEAIGMYKKKTSSEVAKE LSITVGTLTVAINNLVKKGYVERLRSEDDRRVVKLGLTKKGKLLFRVHQHFHREMVKNIL KGMEQEEEQALLRALKNLHDFLQEYK >gi|237663595|gb|GG668923.1| GENE 6 4605 - 5570 1067 321 aa, chain + ## HITS:1 COG:SP0417 KEGG:ns NR:ns ## COG: SP0417 COG0332 # Protein_GI_number: 15900336 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Streptococcus pneumoniae TIGR4 # 4 321 3 324 324 367 57.0 1e-101 MKNYARISCTSRYVPENCVTNHQLSEMMDTSDEWIHSRTGISERRIVTQENTSDLCHQVA KQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDISAACSGFVYAL SMAEKLVLSGRYQTGLVIGGETFSKMLDWTDRSTAVLFGDGAAGVLIEAAETPHFLDEKL QADGQRWAALTSGYTINESPFYQGHEQASKMLQMEGRSIFDFAIKDVSQNILSLVTDETV DYLLLHQANVRIIDKIARKTKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLILGSQ QRVVLTGFGGGLTWGSLLLTL >gi|237663595|gb|GG668923.1| GENE 7 5623 - 5850 545 75 aa, chain + ## HITS:1 COG:no KEGG:EF2884 NR:ns ## KEGG: EF2884 # Name: acpP # Def: acyl carrier protein # Organism: E.faecalis # Pathway: not_defined # 1 75 1 75 75 83 100.0 3e-15 MVFEKIQAIIVEELGKDAEEVQLTTNIQEELDADSLDLFQIINEIEDEFDVKIETEDGIQ TVQDLVTYVEKQQAN >gi|237663595|gb|GG668923.1| GENE 8 5987 - 6943 1082 318 aa, chain + ## HITS:1 COG:SP0419 KEGG:ns NR:ns ## COG: SP0419 COG2070 # Protein_GI_number: 15900338 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Streptococcus pneumoniae TIGR4 # 1 317 1 317 324 394 68.0 1e-109 MNQQLCELLGINYPIFQGGMAWVADASLASAVSNAGGLGIIAGGNAPKEVVKKEIKKVKE LTEQPFGVNIMLLSPFADEIVDLVCEEQVPVVTTGAGNPAKYMARFKEHNIKVIPVVPSV ALAKRMEKIGADAVIFEGMEAGGHIGKLTTMSGLPQIVDAVSIPVIAAGGIGDGRGMAAA FMLGAEAVQLGTRFLIAKECNVHPDYKQKVLKARDLDAVITCQHFGHPVRTLKNKLTAQY NQLEKQELQKEVPDLEMFEKIGQGALRKAVVDGDMDYGSVMAGQIAGLIKKEETAQEIID SLMSECKAIVHKMNQRWG >gi|237663595|gb|GG668923.1| GENE 9 6976 - 7905 1086 309 aa, chain + ## HITS:1 COG:SP0420 KEGG:ns NR:ns ## COG: SP0420 COG0331 # Protein_GI_number: 15900339 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 2 303 3 304 306 343 61.0 2e-94 MKTAILFSGQGAQYQGMGEELYHQEAIVRETFDEASHILGYEMAELCFTENERLNETEYT QPAILTVSVAFYRLLQQKGLTPDVVAGLSLGEYSALVASGALRFSEAVALVQKRGQYMTD AAPQGIGKMVAVMNAEREVIEKACQEASAFGIVAPANYNTPQQIVIGGEVAAVDQAMTLL KEAGVKRMIPLNVSGPFHTALLQPASKKLAQDLAKLNFQTMQIPVISNTTAEIMPQEAIQ ALLEKQVMSAVRFEDSIETMKAMNVGTMIEVGPGKTLTGFVKKIDKTIEMHRVEDVATLT ETLTALTGR >gi|237663595|gb|GG668923.1| GENE 10 7909 - 8646 214 245 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 239 4 238 242 87 28 1e-15 MELTGKNVFITGSTRGIGKAVALAFAKEGANIVLNGRSEITPEQRQEIEAFGVKCIGLSG DISDFDAAGEMIQATVDQLGSIDILVNNAGITNDKLLLRMTKEDFNACLDINLVGTFNMT QQAVKRMMKQRSGRIINMASVSGLMGNVGQANYAASKAGVVGFTKSVAREVAPRGITCNA IAPGFIQTEMTDVLSEKVKTQMNAQIPLQTFGQVEDVAATAIFLAKSPYITGQVVNVDGG LVMHG >gi|237663595|gb|GG668923.1| GENE 11 8665 - 9900 1553 411 aa, chain + ## HITS:1 COG:SP0422 KEGG:ns NR:ns ## COG: SP0422 COG0304 # Protein_GI_number: 15900341 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 411 3 410 411 475 58.0 1e-134 MNRVVITGYGVTSPIGNEPETFLESLKTGKNGIGPISKFDVSETGVTLAAEVKDFPMEKY FVKKDGKRMDKFSLFGIYAALEAMAMSGLDTSQLDVDRFGVMVGSGIGGLETIQNQVIRM HDKGPERVAPLFIPMAIGNMVAGNIALRVGAKGICTSTVTACASATHSIGEAFRNIKHGY SDVIIAGGAEAPITEIGISGFASLTALTKATDPEKASIPFDKERSGFVMGEGAGVFILES LDHALERGATILGEVVGYGANCDAYHMTSPTPDGSGAAKAMVLAMEEAGISPEKIGYINA HGTSTQANDSAESKAIELALGNAAKTAYVSSTKSMTGHLLGAAGGIEGIATLNALQHQFI PPTINVENQDEAITVNVVLNESKEHKFDYALSNSLGFGGHNAVICLKRWED >gi|237663595|gb|GG668923.1| GENE 12 9902 - 10390 626 162 aa, chain + ## HITS:1 COG:SP0423 KEGG:ns NR:ns ## COG: SP0423 COG0511 # Protein_GI_number: 15900342 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Streptococcus pneumoniae TIGR4 # 1 158 1 160 161 113 47.0 2e-25 MQLEEVKALLTQFDQSTLTEFDLRKGSFELYMNKNTASGRSAVEPMAQPQETPVAASGVS APVETVSVVEETPTNTPTANEKTEEIPSPIVGIVYLQPAPDKENFVKVGDTVKTGDVVCI VEAMKLMNEITATVDGVITEILVNNEDVVEFGQPLFRVAKGE >gi|237663595|gb|GG668923.1| GENE 13 10394 - 10819 576 141 aa, chain + ## HITS:1 COG:CAC3571 KEGG:ns NR:ns ## COG: CAC3571 COG0764 # Protein_GI_number: 15896805 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Clostridium acetobutylicum # 1 140 1 140 141 168 60.0 2e-42 MKLTITEIQEILPHRYPFLLLDSVEEVIPGERVVAKKNVTVNEQVFQGHFPGNPVLPGVL IIESLAQAGAVALLSMPEFKGKTAYFGGLDKAKFRQKVTPGDTLILEVELLKVRASAGMG KGVAKVNGKKVAEAELTFMIG >gi|237663595|gb|GG668923.1| GENE 14 10827 - 12197 1476 456 aa, chain + ## HITS:1 COG:SP0425 KEGG:ns NR:ns ## COG: SP0425 COG0439 # Protein_GI_number: 15900344 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Streptococcus pneumoniae TIGR4 # 1 451 1 452 455 658 73.0 0 MFSKVLIANRGEIAVRIIRACRELGVQTVAVYSEADQEALHTQLADEAICIGPAKATDSY LNVQAVLSAAIVTNAEAIHPGFGFLSENSQFASMCEECNITFIGPKAETIDAMGNKINAR QLMQKAKVPVIPGSDGVIDSVEEALTIAEEIGYPVMLKAAAGGGGKGIRKVLSKEELPKH FTSAQQEAKAAFGNDDMYLEKIIYPARHIEVQILGDQYGHVIHLGERDCSLQRNNQKVLE ESPSIAISEEKRQMLGETAVRAAQAVHYENAGTIEFLMDPAGDFYFMEMNTRIQVEHPVT EMVTGIDLVKAQLEIASGEPLGYTQEDVTMTGHAIECRINAENPAFNFAPSPGKIQNLLL PSGGMGLRVDSAMYSGYSIPPYYDSMIAKVIVHGENRFDALMKMQRALNEIVTEGIITNA EFQLDLITHDNVLTGDYDTSFLQETFLPNWEPESNH >gi|237663595|gb|GG668923.1| GENE 15 12292 - 13158 848 288 aa, chain + ## HITS:1 COG:SP0426 KEGG:ns NR:ns ## COG: SP0426 COG0777 # Protein_GI_number: 15900345 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 282 1 283 288 406 68.0 1e-113 MALFKKKNYIRINPNRADANDASKKPSVPDNMWAKCPSCKRTLYTKEMGAEKICPHCGYS FRIGAWERLAITVDEKSFHNWDSELVTKDPLNFPGYLEKIEKMQEKTGLDEAVLTGEATI EGQAVAIGIMDANFIMGSMGTIVGEKITRLFERATEKHLPVVIFTASGGARMQEGIFSLM QMAKISAALQRHNKAGLLYLTVLTDPTTGGVTASFAMDGDIILAEPQSLIGFAGRRVIEQ TIRQELPDDFQKAEFLLEHGFVDQIVPRNLLRQRLSDLLRLHSLEGWR >gi|237663595|gb|GG668923.1| GENE 16 13160 - 13948 1025 262 aa, chain + ## HITS:1 COG:CAC3568 KEGG:ns NR:ns ## COG: CAC3568 COG0825 # Protein_GI_number: 15896802 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Clostridium acetobutylicum # 10 261 13 264 274 322 62.0 3e-88 MEKKTANDVVTLARAQDRLTTLEYIEAIFEDFLEFHGDRYFADDLAVVGGVATLQGKPVT VVGIQKGRNLPENIERNFGSPNPEGYRKALRLMKQAEKFNRPVITFVNTAGAYCGIGAEE RGEGEAIAQNLLEMSDLKVPIISVIIGEGGSGGALALAVADEVWMLEHTIYAVLSPEGFA SILWKDGSRAKEAAELMKITATELKELAIVDKVIPEVMNGQPLEQAKINRMLQKAFISKL TELAKLDTETLLEKRYQRFRKY >gi|237663595|gb|GG668923.1| GENE 17 14170 - 14697 615 175 aa, chain + ## HITS:1 COG:SPy0305 KEGG:ns NR:ns ## COG: SPy0305 COG2179 # Protein_GI_number: 15674472 # Func_class: R General function prediction only # Function: Predicted hydrolase of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 5 174 25 194 194 189 52.0 2e-48 MFSKYKPTWMIDAIYKITPAQLKKLGIKAVLTDLDNTLIAWNNPDGTEELKTWLLEMKNA GITVLVVSNNKDSRIKRVVEKFDLDYVARALKPTARGFKLAEKKLGLKPSEMLMVGDQIM TDIRGANAAGIRNVLVQPIVDTDGWNTRINRFFERKIMKYLSKKHPEMTWRGGLE >gi|237663595|gb|GG668923.1| GENE 18 14694 - 15803 1375 369 aa, chain + ## HITS:1 COG:SPy0306 KEGG:ns NR:ns ## COG: SPy0306 COG1161 # Protein_GI_number: 15674473 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Streptococcus pyogenes M1 GAS # 3 369 2 372 372 518 66.0 1e-147 MTEAIHCIGCGAIIQTENPHELGYTPKTAFEKGMETGEVYCQRCFRLRHYNDIQDVQLTD DDFLRLLNGLGTEDALIVNVVDIFDFNGSLIPGLHRFIGDNPVLLVGNKVDILPKSLKKP KMVQWMRERAHEAGLRPVDVLLTSGKKPQEMQELLDTIEKYREGRDVYVVGVTNVGKSTL INQIIQQTVGVQDVITTSQFPGTTLDKIEIPLDDGHFLIDTPGIIHRHQMAHYLGKKDLK IIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSFIAYVSNDLNLHRTKTATADAF YEKHVGGLLQPPRTDEVAEFPELVRFEFSVKEKTDIVFAGLGWITVTEPGVVAGWAPKGV DVLRRKALI >gi|237663595|gb|GG668923.1| GENE 19 15827 - 16138 286 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15901580|ref|NP_346184.1| hypothetical protein SP_1748 [Streptococcus pneumoniae TIGR4] # 1 103 1 103 103 114 58 5e-24 MKLRGKQKRYLRSQAHHLQPIFQVGKGGLNDAMITQIDEALEKRELIKITLLQNTDEIAE EVAEELTAAIHCDVVQIIGRVLVLFKPSSKEKYQKISAAVKEI >gi|237663595|gb|GG668923.1| GENE 20 16156 - 16815 619 219 aa, chain + ## HITS:1 COG:SP1747 KEGG:ns NR:ns ## COG: SP1747 COG1057 # Protein_GI_number: 15901579 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 17 211 15 209 209 246 62.0 2e-65 MGEKRQARQGADVLLQEEPLRFQTRKQVGLLGGNFNPVHLAHLVMADQVQNQLGLDKVYL MPTYLPPHVDEKKTISSEHRLAMLELAVADNPCLDIEPIELIRKGKSYTYDTMKALKEAN PDTDYYFIIGGDMVEYLPKWHRIDDLLHLVQFVGIRRPNYPTESTYPIIWVDVPQMAISS TLIRQKVKSGCSTRYLLPENVINYIQEKGLYQDELDNKL >gi|237663595|gb|GG668923.1| GENE 21 16793 - 17383 890 196 aa, chain + ## HITS:1 COG:SPy0309 KEGG:ns NR:ns ## COG: SPy0309 COG1713 # Protein_GI_number: 15674476 # Func_class: H Coenzyme transport and metabolism # Function: Predicted HD superfamily hydrolase involved in NAD metabolism # Organism: Streptococcus pyogenes M1 GAS # 6 191 5 190 197 178 48.0 5e-45 MSWITNYDAAQRELLMQKVQMQMSERRFRHVLGVEETAVALAAKYGADEAKASIAALTHD YAKERPNDEFELIIRRDGFDLALLNYGNEIWHGLVGADIVQRELAIDDEEILQAIRVHTT GAAKMSLLDKIIYVADYIEPGRDFPGVKEAREIALVDLDAAVAYETKHTLLHLIEQEHKI YPKTLETYNQWVVNQK >gi|237663595|gb|GG668923.1| GENE 22 17619 - 17768 175 49 aa, chain + ## HITS:1 COG:lin1521 KEGG:ns NR:ns ## COG: lin1521 COG0799 # Protein_GI_number: 16800589 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Listeria innocua # 1 46 69 114 118 71 67.0 4e-13 MEGKEGGKWILIDLGDVIVHVFQSSERAFYNLEKLWSDAPMVDLSAWVD >gi|237663595|gb|GG668923.1| GENE 23 17770 - 18510 816 246 aa, chain + ## HITS:1 COG:L28696 KEGG:ns NR:ns ## COG: L28696 COG0500 # Protein_GI_number: 15672211 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Lactococcus lactis # 3 245 4 244 244 273 56.0 2e-73 MAYETFAFVYDEVMDESLYQKWLDFSNRHLPQGTQQILEMACGTGALAVDFAKSGYDVTA LDLSEEMLMIASERAFEEEVPVQFVQGNMLDLSEVGQYQAITCFSDSLCYMANRQEVQQV FDEVYQALEEEGTFIFDVHSTYKIDSVFPEYSYHYQTEEFAFLWDSYAGEKEHSIEHFLT FFVKEQETDEHFVRYDELHQERTYSLDNYLRMLESAGFMNVKVYADFTDEAPTEISERWF FVCQRD >gi|237663595|gb|GG668923.1| GENE 24 18600 - 19778 999 392 aa, chain + ## HITS:1 COG:BS_ylbM KEGG:ns NR:ns ## COG: BS_ylbM COG1323 # Protein_GI_number: 16078570 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Bacillus subtilis # 1 391 1 408 415 306 39.0 4e-83 MKACGIIVEYNPFHNGHRYHAQQARQQSGAEVVIAIMSGNFLQRGEPALLDKWARAEEAL QNGVDLVIELPTAWSVQSADYFAKGGIKLLQALQCESLCFGTDSTSAIDYAAFGQFVQEN QSLIDQTFHALTDKQLSYPQKMTAVFRQVYPESRFDFSSPNHILGMSYAKENATYPTPMT LYPIARKQAGFHDATISGKVASATAIRQSVFQQEITQVLPTVPSITAQHLQTQAMISWEN YWPFLKYKIVQSSLEELQAIYQMTEGLEYRLKDQIQAAGSFHELMEHMKTKRYTWTRLQR LATYILLNMTKEEVETVWQDSYLHVLGFTPKGQAYLKETKAQIQLPVISKVSKENRAMLS LDIRANQLYQMGDSSLKEQNFGRFPLRFSPDT >gi|237663595|gb|GG668923.1| GENE 25 19865 - 20584 1043 239 aa, chain + ## HITS:1 COG:lin0388 KEGG:ns NR:ns ## COG: lin0388 COG0217 # Protein_GI_number: 16799465 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 239 1 239 239 367 79.0 1e-101 MGRKWANIKEKKAAKDANNSRVYAKFGIEIYVAAKSGDPDPHANQKLRFVIERAKTYNVP KHIIDRAIEKAKGSADEQYSELRYEGFGPNGSMVIVDALTNNVNRTAADVRAAFGKNGGN MGVSGAVSYMFDNTGIIGFAGDDADEILEYLMEKDIDVRDVVEEDGQIIVYTEPEDFHHA QEALKEKGIEEFTVTELEMVPQNEVTLEGDDLANFEKMLDVLEDLEDVQKVHHNVDLPE >gi|237663595|gb|GG668923.1| GENE 26 21118 - 21936 587 272 aa, chain + ## HITS:1 COG:no KEGG:EF2864 NR:ns ## KEGG: EF2864 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 272 1 272 272 434 97.0 1e-120 MLAFFVGLAVLSLTACREPKEKKVTASTEASSKVEETNEKTSETIDKTNEQASSSIESNE SVKNEEPTADGNNSQLTVADLDTTAINAGDFTTLVGTWKNGKGESLIIHPDGSTNTGGMI TKDSPTDESRPITSLSIRWGPTGAALLLYKIGVENPNGDQSDKTKPRLLITQDSGNYPAE EYYYRSSEEENQDQNEEAKIIDTQEKAEIYIRKTLTDAENNDTNLGFLGMNGNDFFFRAQ SKQMVANGGTGTVGFYRVSPQGAVRITDAQGN >gi|237663595|gb|GG668923.1| GENE 27 22546 - 23490 1336 314 aa, chain - ## HITS:1 COG:no KEGG:EF2863 NR:ns ## KEGG: EF2863 # Name: not_defined # Def: endo-beta-N-acetylglucosaminidase # Organism: E.faecalis # Pathway: not_defined # 1 314 1 314 314 598 100.0 1e-170 MGHQLSTHFFNKKTGIISTFLSLILLVGGLLFALPAFEVQAASTVTPKTVMYVEVNNHDF NNVGKYTLAGTNQPAFDMGIIFAANINYDTVNKKPYLYLNERVQQTLNEAETQIRPVQAR GTKVLLSILGNHEGAGFANFPTYESADAFAAQLEQVVNTYHLDGIDFDDEYAEYGKNGTP QPNNSSFIWLLQALRNRLGNDKLITFYNIGPAAANSSANPQMSSLIDYAWNPYYSTWNPP QIAGMPASRLGASAVEVGVNQNLAAQYAKRTKAEQYGIYLMYNLPGKDSSAYISAATQEL YGRKTNYSPTVPTP >gi|237663595|gb|GG668923.1| GENE 28 23648 - 24229 670 193 aa, chain - ## HITS:1 COG:lin2536 KEGG:ns NR:ns ## COG: lin2536 COG1434 # Protein_GI_number: 16801598 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 11 192 11 188 189 160 45.0 1e-39 MHWLKITSLSIVSFGFCILLILGLLIFTGKNTQPTDKPDAILILGARVLGTSKETALPSR VLQARLDVAIPYIKQHPETPVIVSGGQGADEPATEAAVMKQYLLNKGVPEKQILLENRAT RTKENIVNSQKLLSFKRLVIVTSDFHMYRSQLLANRAGISNVSGITAASSFPKDIKNFGR ELLSLGYALLFDW >gi|237663595|gb|GG668923.1| GENE 29 24420 - 25205 592 261 aa, chain + ## HITS:1 COG:no KEGG:EF2861 NR:ns ## KEGG: EF2861 # Name: aadK # Def: aminoglycoside 6-adenylyltransferase # Organism: E.faecalis # Pathway: not_defined # 1 261 24 284 287 517 97.0 1e-145 MGMVGSRTNVKVPKDSFQDFDIVYIIEPCAEFFETATWTAKFGQPLIMQRPKEMTLFPTE PKTRETFLMLFEDGQRIDLTLCPLAEKDNWHEGDSLAIILLDKDENLPPLPVASDKNYTV TAPDQQQFNDCCNEFWWVSTYVVKGLCRNELFYAVTHLYEYCQQELLRLLSWQAAWQEPE PISVGKQFKYLKNYVTPDTMDQLASLLDFSSKEACWNSLIKTQAFFDVVAQDFAKMAQFT YYLQEAKKVTEYTNSLRLKDL >gi|237663595|gb|GG668923.1| GENE 30 25361 - 26806 1452 481 aa, chain + ## HITS:1 COG:CAC0747 KEGG:ns NR:ns ## COG: CAC0747 COG1376 # Protein_GI_number: 15894034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 6 460 1 465 466 114 24.0 3e-25 MKKEEMQVRNTRRQKSGKNNKKKVIITSLVGLALVAGGSYVYFQSHFLPTTKVNGVSVGW LNVNAAEEKLAQVNQTEEVVVQTGAKEEKIQLPKKYQLDQKFLKDHLHSSKVKLPLNEAF KKELEAKLATLSFPEGKPSKNASIRRGNGTFEIVPEEQGTVVDTQRLNQQIIADVEAGKG NYQYNAKDFYKAPEITKEDQTLKATLTTLNNKLNKTITVDINGEKVAFDKTQIQNVLNDD GTINKEKLTTWVTQLETTYGSANQPVLFTDVHGTTRRFKNNGSYGWSIDGAKTQELLVNA LNSQEQTNAITAPLVGDTKENSKIANNYIEIDLKDQKMYCFIDGKKIVTTDVITGRYNKG TATVPGFHTILYRTTDVNLEGQMLDGSRYSVPVKYWMPLLSQGGVVTQIGIHDSDHKLDK YGDKEAFKTDAGSNGCINTPGTEVSKIFDVSYDGMPVIIYGHIYDDAPGEFDKPVDYGEE V >gi|237663595|gb|GG668923.1| GENE 31 26971 - 27150 291 59 aa, chain + ## HITS:1 COG:L168282 KEGG:ns NR:ns ## COG: L168282 COG1942 # Protein_GI_number: 15672556 # Func_class: R General function prediction only # Function: Uncharacterized protein, 4-oxalocrotonate tautomerase homolog # Organism: Lactococcus lactis # 1 59 1 59 61 65 59.0 3e-11 MPFVHVELIEGRTEEQLTNMVKDITEAVSKNAGAPKENIHVIVNELKKDRYAQGGEWKK >gi|237663595|gb|GG668923.1| GENE 32 27547 - 29484 2655 645 aa, chain + ## HITS:1 COG:SPy0517 KEGG:ns NR:ns ## COG: SPy0517 COG0441 # Protein_GI_number: 15674621 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 3 645 2 642 647 987 74.0 0 MSIHITFPDGAVKPFDSGVTTFDVAKSISNSLAKKALAGKFNGVLIDLDRPIVEDGSLEI VTPDHEDALGILRHSSAHLMANALRRLFPNIKFGVGPAIDSGFYYDTDNGESPVTAEDLP AIEAEMMKIVKENNPIVRKEISRAEALELFADDPYKVELITDLPEDEIITVYDQGDFVDL CRGVHVPSTGRIQVFKLLSVAGAYWRGNSDNHMMQRIYGTAFFDKKDLKEFIKMREEAKE RDHRKLGKELDLFMVSQEVGSGLPFWLPKGATIRRTIERYIVDKEISLGYQHVYTPIMAD VELYKTSGHWDHYHEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNDIHSYRELPIRIAEL GMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNITDYRF RLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDVQVKTAL GMEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEVYKGAF PTWLAPIQATIIPVSVEAHSEYAYEIKERLQAQGLRVEVDDRNEKMGYKIRASQTQKVPY QLVVGDKEMEDATVNVRRYGSKETSVEDLSIFIDSMAAEVHNYSR >gi|237663595|gb|GG668923.1| GENE 33 29651 - 31786 2308 711 aa, chain + ## HITS:1 COG:SP1673 KEGG:ns NR:ns ## COG: SP1673 COG0768 # Protein_GI_number: 15901508 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Streptococcus pneumoniae TIGR4 # 27 709 9 677 680 531 42.0 1e-150 MKKNSFIDKIKKTDAAAKSQRGRKPHIPFRLNLLFFVIFTLFVSLIVRLGYLQIVEGEEF NKKITANSSLQITTPSPRGQIYDSQGKVLVSNKANLAITYTRGKNIEGKDILPIANKVNE LINVPVDPNLTDRDKKDYWLANPENLKAAQARLTDQDKEDEKGNKITDEGTLYAKAVEKV TPEEIAFDDRTLQAVTIFKRMNAASQMNTVFIKNEGVTEGEIATIGEHTAEISGVSTGTD WTRDYSQSGALRSLLGTVSTEKQGLPAEEVDEYLKKGYARNDRVGTSYLEKQYEDVLQGK KAKSEVVLDNNGKIVSQTPISKGEKGSNLKLTIDSNFQNKVDEILQRNYSQIVKTIGPYS ENAYVVAMNPQTGAILAMSGFHHDLATGEVTPNPLAPILNSEVPGSVVKAGTLTAGYETG VIKGNDVLTDEAILLAGSNPKASWWNASGGTTMQLTAEQALEYSSNAYMMKLVFKMMGVN YYPNMIFPYEVGDDTVFKELRKAFAEYGMGTKTGIDIPGETTGIQNKDFKDSSSAPQGGN LLDLSFGQYDTYSALQLAQYVSTVANNGIRVQPHVVEGIYGNDENGALGKILKEIEPKVL NKVNISEDQIGILQQGFYNVVNGTSPFTTARGLKSDKFSIAAKTGTAETQATDANGVNHT TVNSNLVAYAPYENPEIAISVVLPHLNDESSKPNQTIAKEVLEAYMEMYKK >gi|237663595|gb|GG668923.1| GENE 34 31912 - 32061 267 49 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29377324|ref|NP_816478.1| ribosomal protein L33 [Enterococcus faecalis V583] # 1 49 1 49 49 107 100 8e-22 MRVNITLECTSCKERNYLTNKNKRNNPDRLEKQKYCPRERKVTLHRETK >gi|237663595|gb|GG668923.1| GENE 35 32336 - 32587 440 83 aa, chain + ## HITS:1 COG:no KEGG:EF2797 NR:ns ## KEGG: EF2797 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 19 83 1 65 65 70 96.0 1e-11 MSNYEEKEAQALAKIADVLNKLDASLEELGSLDEDTKKHSMKKWIVEKKAIHEIKKIAHE AGKYDKYDEKELEKEMDLLEKFM >gi|237663595|gb|GG668923.1| GENE 36 32843 - 33907 607 354 aa, chain + ## HITS:1 COG:no KEGG:EF2796 NR:ns ## KEGG: EF2796 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 354 1 354 354 570 98.0 1e-161 MTFYQLLQLDPFILKQKIHQADTKKQRRYFWRALLIRDILLVSFAILWVSTITFFFGKAV APFSIVLFCLLLSIRFVSYGYREKQALLSLGIVLTILGVSPLISLISVSFLQLGLHFICL LALFFLTGKNPKMGNPGLYTFSYLYLVGTVHYQSFQQLEQTFFVLVFAYLLLAFVYHVKH KKLDQEITFIQMVTENGFFNQRNIWFGYYALGISLLLFIGTHLQIDRFMWATFASSSLFS GYNTFKLSERAKERIIGIVIGSLVSAILLFYIPTNLLGILGGLCLGLCTSYKSKTIFNCV GAIMAASMIFGLETSLYLRILLNMLGLAYGLLYHFVFVKTMSYCNRKQWLKFSE >gi|237663595|gb|GG668923.1| GENE 37 33970 - 35472 912 500 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0060 NR:ns ## KEGG: BBPR_0060 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 3 498 32 539 539 122 23.0 3e-26 MKHFIKENKGLAIYSFLMVFATYGIKLFNNTYAIDTMHLMTNYRGYLKHWVSIGRPGLVA LKLLTYNYVNVYFLNLLAIIFFAIATILLCYYVDLSTKQIYNKKYLYIIPSIFPTSQLFS EQFYFVLQNFEFSLGICLVILSLIAIYHIPNKIFKLFGFLLLAFTLTMYQSFFVFACTLI LFKILMALYFAQLNDLKISFKDYAFKIGHFILLAISSLVLSQLMAMLAKKVLNVESSYLD NMILWGKRPLIDSINDIKDYAKELFFPQVGDTFFTPLFLICVLLLVIVLINMSYLKRKNV FFIFITLLGILITPLMFTILGGKRPAIRGEVPNFPAVLALLLIFIMIYWGYNFVLKHLLI GIVIFFTFIQVRETTNLEYSEYLTAEEDLRTAEMITNNIYSMEIENPESYKLLMYGNRSP RNVSNIKGETNGVSLFEFMPNSVHTSLNTLLYMKTFGLNFNDPTPEDFEKHKALQAEMNV WPSKDSIRVVDDCIVVNLSK >gi|237663595|gb|GG668923.1| GENE 38 36008 - 36583 626 191 aa, chain - ## HITS:1 COG:L133792 KEGG:ns NR:ns ## COG: L133792 COG3152 # Protein_GI_number: 15673282 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 8 185 3 169 175 62 29.0 4e-10 MVKIEEKGKVTFGQAFKDYFRGYVDFKGRTTRAGYWWMTLVLSILALIFYIAIVGKAVSA ILAAEYFETYDFGNLLPLMLFALVLWLALLLPTWAMCVRRYRDAGMTGWGVLVLYLLSIA CSYTQVFSVMSTFKYDVQTDTVITGGSPVFLFFTLVISLFFFLLTVLPTDKLTTTSQNSV LRFFFRYKEVK >gi|237663595|gb|GG668923.1| GENE 39 36749 - 37519 828 256 aa, chain + ## HITS:1 COG:lin2363 KEGG:ns NR:ns ## COG: lin2363 COG1073 # Protein_GI_number: 16801426 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Listeria innocua # 3 249 2 248 250 169 36.0 6e-42 MKISIRHRYIAKIPALEVTTEEQKNEALPLIVYYHGWQSAKELSLTQARKLAHEGFRVIL PDAMNHGERKTGPISTIPSITFWSSIQYNLIEFPVIIHHFHKLGLIKENWIGVGGVSMGG ITTSALMTQHPEIQAATCLMGTPYPARYIQRVIQRAKEFAIFVPKDLPLLLSWVHQYDLS QTPERLQERPMLFWHGTEDEKIPYEDMADFEQLVSGKTYARNTQFITEIGERHLVKGETM DLVVDFFKEASKTLEK >gi|237663595|gb|GG668923.1| GENE 40 37607 - 38149 572 180 aa, chain + ## HITS:1 COG:lin1373 KEGG:ns NR:ns ## COG: lin1373 COG0212 # Protein_GI_number: 16800441 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Listeria innocua # 25 177 22 176 179 119 42.0 3e-27 MEKNKLRKVGLTALEWLKQHPEIKQHKESSLYEQLFASQQWQQAQTVGMIRSLPLELSTQ PIFERAMQEGKQVAVPRTFKGGKMHFYQVFPETVYDTSAFGVEEPPLTAAEITATAIDLL IVPGIVFNRAGYRIGFGGGFYDRYLEHFSGHSCSLVFSEQLHEQWQPEAFDQPIEQLFIQ >gi|237663595|gb|GG668923.1| GENE 41 38160 - 38870 703 236 aa, chain + ## HITS:1 COG:lin1374_1 KEGG:ns NR:ns ## COG: lin1374_1 COG0705 # Protein_GI_number: 16800442 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Listeria innocua # 6 183 173 345 345 137 41.0 2e-32 MNYQTEMKLKRLKNQPFITYALLGISIIVFLGLELTGGSENILNLVNWGAMVRPLVAQNH EYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWRYLGIYLLSGIAGNIASFAFG TPNSVSAGASTALFGLFGAFVILGRHFRDNPAIMYMVQRYSMFIVINLLFNLFSSSVDMM GHVGGLIGGLLVATAFAVPNREKAFNKHERIMATLIFIFLVVICLLLGFKKYGLPV >gi|237663595|gb|GG668923.1| GENE 42 38888 - 39106 447 72 aa, chain + ## HITS:1 COG:SPy1530 KEGG:ns NR:ns ## COG: SPy1530 COG4483 # Protein_GI_number: 15675429 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 62 1 62 67 66 59.0 9e-12 METLYDVQQLFKQFGMYIYVGARIYDIELMMIELKKLYEGQLVDRDTYLQARHILQREHR IEESRGKQKGID >gi|237663595|gb|GG668923.1| GENE 43 39107 - 40078 1106 323 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 1 318 1 319 319 430 64 1e-119 MDKKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNM KKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAAL GERWKGAGENNPDVIFITLGTGVGGGIIAAGELLHGVAGCAGEVGHVTVDPNGFDCTCGK RGCLETVSSATGVVRVARHLSEEFAGDSELKQAIDDGQDVSSKDVFEFAEKGDHFALMVV DRVCFYLGLATGNLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKL AELGNEAGVIGAASLALQFSKEK >gi|237663595|gb|GG668923.1| GENE 44 40094 - 40498 565 134 aa, chain + ## HITS:1 COG:lin1388 KEGG:ns NR:ns ## COG: lin1388 COG0607 # Protein_GI_number: 16800456 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Listeria innocua # 22 130 18 126 126 118 55.0 3e-27 MSILWVINGILLVIVLAMVFNELYLKIMVKRSAKMLTEEEFKETMRKAQVIDVREKDTFD AGHILGARSMPYSMLKTTIGSLRKDQPVYLYDQKKALSIRAANLLRKNGYTDIYILKGGY DGWTGKVKKRNSSS >gi|237663595|gb|GG668923.1| GENE 45 40839 - 41237 478 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227519431|ref|ZP_03949480.1| ## NR: gi|227519431|ref|ZP_03949480.1| hypothetical protein HMPREF0348_2414 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2414 [Enterococcus faecalis TX0104] # 1 131 1 131 131 253 100.0 3e-66 MKKKNLYPALILFFLVSSIVCLFTFKQNLLPVKADALSAQQAVKTEINPTIQAALKDAEK QENPLEKWSEMVQLSSADDTTILYALEGFIHGQVIQGEGTPDEIVYDSDTDPNATTLGEI RQAIREHYNLNG >gi|237663595|gb|GG668923.1| GENE 46 41258 - 41941 574 227 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227519432|ref|ZP_03949481.1| ## NR: gi|227519432|ref|ZP_03949481.1| hypothetical protein HMPREF0348_2415 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2415 [Enterococcus faecalis TX0104] # 1 227 1 227 227 435 100.0 1e-120 MDEYYEKIFIRFTSVGLLSLFFPPIVTSAAELKQSPPDIDSVETFLDKMQADEKIAVLPD GSIVSGNGIEIIDPDTQNVVAVVEPETSPLSITVEEYRNKQKYSLNEDLTISLIRRGSPA PNNKNYNIMVRKDTYLTSNSFSSRGWRFAGYNYFPQSGTGAYLLWYTFKDSAMIGSISEA RNTYRTGIAHGISVYPGSPRYHTGPGNLTTYYTYNPIPGASYLVANW >gi|237663595|gb|GG668923.1| GENE 47 42251 - 42601 563 116 aa, chain + ## HITS:1 COG:BMEII0787 KEGG:ns NR:ns ## COG: BMEII0787 COG3189 # Protein_GI_number: 17989132 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Brucella melitensis # 2 116 4 115 116 116 54.0 1e-26 MIQIKRAYEAPTEQDGYRVLVDRVWPRGKSKESEKLDEWLKEVAPSTELRKWFNHEANKY PEFKQKYQEELKHEPTATAFKQLQTIVKNQPVVTLVYGAKDTVHNQAVVLKELLEK >gi|237663595|gb|GG668923.1| GENE 48 42615 - 44453 1479 612 aa, chain + ## HITS:1 COG:no KEGG:EF2785 NR:ns ## KEGG: EF2785 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 612 1 612 612 1235 99.0 0 MKIAIVGAGPRGLSAAERVIEWARKTEINIQLTLFDPYGPGGKIWRAEQPNYLLMNTVIS QVTLFTDESFSGEGPIVKGPTLYEWTQTEAAQYIQQQQPYNYLELLKECHRLGPNDHCSR AFYGMYQKWFYTYLATRCNEQTSLTFFKEPVTAVRAGEDNYYVYTQSIEFTADKVILAMG HQENELTTVEQELADYAKEHRLFYSSPKNAADALLALANIPAKQPVVLKGLGLAFFDYLS ALTIGRGGVFSRQNGRLRYEPSGREPIIIAGSGRGFPSHPRGNNQKGYGETYQPVFLTET YLAECRKKGQVTGAEFFGYLKKEVEYVYYTCLIEEKYPHLSKEAFQQLFIQTKGAPKSLA HFEKQDWFDWQVLEHPETKKTTHERFRSFLLEYLKWDIQEAEKGNLSGPLTTALDSLKDL RDQIRFVLDEGLLTNDESQKWLWHWFTPLNTFLSVGPSVERTEELQALVELGLVTILGPE MRVEMKAGQFITYANLFPENRYNSHFLIEARIPKVNNEKSLNPLTRQLLADKLATLHQLA LADGQIVKTGALLIVPATNQVITKDGQVATGLFSCGIPTEGIHWLTAAAARPGVDPWNMR DMDRIAATIFNS >gi|237663595|gb|GG668923.1| GENE 49 44616 - 44783 366 55 aa, chain - ## HITS:1 COG:no KEGG:EF2784 NR:ns ## KEGG: EF2784 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 55 1 55 55 72 100.0 5e-12 MKKFVSGMLVGTAITVAALAGVATTIKKTVIDPIEEKEDMIEENRKKAMRKRIAR >gi|237663595|gb|GG668923.1| GENE 50 45987 - 47201 1199 404 aa, chain + ## HITS:1 COG:L0027 KEGG:ns NR:ns ## COG: L0027 COG4468 # Protein_GI_number: 15673964 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose-1-phosphate uridyltransferase # Organism: Lactococcus lactis # 1 340 1 369 493 187 31.0 4e-47 MTTSQMIADFTTLAIQAGGWMELDRLYLQNRLLSMIGEQELGEVDIRPVATPAADLAEQL CQIASANQLVKTEQQKEQFVVQLMDLLTPPPSVVNAFFAQHYAKEPQEATEYFYQLCQKN GTVIEQEEPVVFSTVYGDFLANKVHSEAPKATLSAQRYPRCEWCMATEGYQGSQQFPATT NHRVIRMNLDGESWGFSFVKQAQYQQQGVIAFEKHQAAKRSVKTFQQLLKIVEVFPHYFA GIDAVFEQNEHVYYQTGLQQFALAEASISEYVELANYPLINAGMVNWPVATFRLEGPNAS EVAQAANDIFEQWQTLKLPTDEIQIVARRKELLYVMDLIFSRPQAKPSLTLAEVQGLMTW SNQKTQALETVASAYQQRLKEASAFAETSEGKAAFLAMVAPVTH >gi|237663595|gb|GG668923.1| GENE 51 47273 - 49033 1896 586 aa, chain + ## HITS:1 COG:lin2852 KEGG:ns NR:ns ## COG: lin2852 COG2812 # Protein_GI_number: 16801912 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Listeria innocua # 1 585 1 579 579 527 49.0 1e-149 MAYQALYRVWRSQRFDDVVGQKAITQTLKNAIVQKKTSHAYLFTGPRGTGKTSAAKIFAK AINCKHSQDGEPCNVCETCVAITEGRLNDVIEIDAASNNGVEEIRDIRDKAKYAPTQAEY KVYIIDEVHMLSTGAFNALLKTLEEPPQNVIFILATTEPHKIPLTIISRTQRFDFKRIST QDIVDHMAHIMQEMALDYEEQALYVIGRAAEGGMRDALSILDQTISFSDEKVTLEDAMQV TGSLTYEMMDHYIQCCVAGDVERALEGLESILGEGKEARRFLEDLLLYCRDLLMYQQAPK LLAEKAGTLTEAFKELATQTPAEKIYQLIQILSDTQNEIRFTNNANIYLEVATVKLAKTV QSNKHNTPETTNQGGSAEGNPELADLQNQIGQLKKELAELKKHGVTTKEADAPRQQARPQ APKSSFRVPTERVYQVLNEATRTHLMNVKNVWEDLLQTLSVTQRAMLKASEPVAASPKGI VVAFDYEIVCARATDDEEMQLAFNNNLSRLMDYTPEMVCITRESWPKLRQSFINQNQGSL NHSEPENEMARLADEPPATNEHSQENPVVDEAIAMFGEELVEVLDD >gi|237663595|gb|GG668923.1| GENE 52 49054 - 49368 570 104 aa, chain + ## HITS:1 COG:L122849 KEGG:ns NR:ns ## COG: L122849 COG0718 # Protein_GI_number: 15672102 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 5 102 1 98 99 93 58.0 1e-19 MMRGMGNMQGMMKQVQKMQKEMAKAQEALNEKEFIGEATNQLVTATFTGDRTMKDLTIKE DVVDPEDVDMLQDLVIMAVNDALVKIEKETEATLGKYTKGMPGF >gi|237663595|gb|GG668923.1| GENE 53 49703 - 50233 492 176 aa, chain + ## HITS:1 COG:SP0723 KEGG:ns NR:ns ## COG: SP0723 COG4732 # Protein_GI_number: 15900620 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 5 175 7 172 174 185 58.0 4e-47 MEKNRIHRVTLLALMIAMDVVLSPLMRIEGMAPMSSVMNIIAGVLLGPLYGTLMALVCGL IRMTFLGIPPLALTGAVFGAFFAGLFYQWGQKLGWSMLGEIFGTGIIGSLLSYPVMVWFT GSKQNFYWFIYTPRFIGATLIGSVIAWLVLVKLKETRVFKQTQELFLGGYFYENKR >gi|237663595|gb|GG668923.1| GENE 54 50217 - 51035 771 272 aa, chain + ## HITS:1 COG:SP0724 KEGG:ns NR:ns ## COG: SP0724 COG2145 # Protein_GI_number: 15900621 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Streptococcus pneumoniae TIGR4 # 6 271 3 265 267 243 46.0 4e-64 MKTSVKFETIFPLTTAPLIQCITNEITCESMANALLYIDAKPIMADDPREFPQLFQQTSA LVLNLGHLSQEREQSLLAASDYARQVNKPTVVDLVGYGASDIRNEVGEKLVHNQPTVVKG NLSEMRTFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQDVLVS QEQVIVLQNGVPELDCFTGTGDLVGALVAALLGEGNAPMTAAVAAVSYFNLCGEKAQTKS QGLADFRQNTLNQLSLLMKEKDWFEAVKGRVL >gi|237663595|gb|GG668923.1| GENE 55 51032 - 51667 537 211 aa, chain + ## HITS:1 COG:SP0725 KEGG:ns NR:ns ## COG: SP0725 COG0352 # Protein_GI_number: 15900622 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 2 207 3 209 210 241 60.0 1e-63 MREQLKVYLVTGRYDFSDTEFLKRIETACRSGVTLVQLREKEVSTRRFYELAVKVKAVTD AYQIPLIINDRVDICLAVDAAGVHIGDDELPVALVRKLVGSTKIVGVSAKTVARGVEAEN EGADYLGVGAIFPTTTKDSPLTSLQTLSEIAAAVTIPVVAIGGIKEENIEQLMGTGVAGV SLVSEIMLAEQITEKVQGLMRVTERMLEARK >gi|237663595|gb|GG668923.1| GENE 56 51664 - 52494 982 276 aa, chain + ## HITS:1 COG:L0200 KEGG:ns NR:ns ## COG: L0200 COG0351 # Protein_GI_number: 15673245 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Lactococcus lactis # 9 269 6 266 267 256 53.0 3e-68 MTEYNLTPQVVTIAGSDSGGGAGMQADLKTFQARQAFGLNIVIALTAQNTYGVQDSLPIP SSFIDAQFQSLAADFKIGAAKTGMLADSERVEAVVRNLQKVDFGPLIVDPVMVAKGGHHL LEAEAVQTIKEQLLPLATVVTPNLPEAEVLLETTIKTEQEMQTAAKKLQQLGTKNIIMKG GHSTNQQAADYILMEDGSSFWLSAPRIVTKNTHGTGDTFSACIAAELAKGTPLEAAIVIG KQFIQGAISQAISVGHGHGPTNHWAQLTQDIQVIKA >gi|237663595|gb|GG668923.1| GENE 57 52587 - 52943 370 118 aa, chain - ## HITS:1 COG:L133547 KEGG:ns NR:ns ## COG: L133547 COG1733 # Protein_GI_number: 15672316 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 4 112 3 111 115 162 72.0 1e-40 METRTYAIGVEATMDVIGGKWKPIILCNLRHGAMRPSDLKRGITGISQKMLTQQLRELEE DNIIERKVYNQVPPKVEYYLSDYGQSLSAVLDNLCNWGESHVAHLQEQGQEIYLKCED >gi|237663595|gb|GG668923.1| GENE 58 53088 - 54260 1323 390 aa, chain + ## HITS:1 COG:L131423 KEGG:ns NR:ns ## COG: L131423 COG2814 # Protein_GI_number: 15672314 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Lactococcus lactis # 3 390 2 390 393 422 70.0 1e-118 MEKKISPNLTLFALAINAFAIGSTEFISVGLLPMIVKSFHISLSQAGLTVSLYALGVTIG APLLTILTGKWNRRSLMLGIMLLFISGNLIAAFAPTFIILLVGRILSALAHGIFMSVSTV IAADVVPPSRRASAIAIMFTGLTVATVTGVPLGTFIGQQTAWHMSFLFIASIGLVGLIAS YFLVPKNLPIPGKVDLKGITRIFTNKPLVFSFLITAFGYGGTFAAYTYLSPLLENLGFSA NAVVIILVVYGVMVAIGNTVGGHWANKKPLDSLVKMFSLLILSLVFLFITVLMDNSLLGL LASLMLGLFAFMNVPGLQLYVVELAEKYVPEDITLASAFNIAAFNIGITVGSMTGGVVTD HLSVTYTPIFGGFIVLIAVLFVLYIRKQEA >gi|237663595|gb|GG668923.1| GENE 59 54330 - 55691 1222 453 aa, chain - ## HITS:1 COG:L184818 KEGG:ns NR:ns ## COG: L184818 COG0477 # Protein_GI_number: 15673330 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 2 451 3 449 454 325 48.0 8e-89 MEQKNVRLFPAVLATGIMSFAGVLIETAMNVTFPTLTKEFGVSTGTVQWVTTIYLLVISI MVPLSNYLLKTYSLRRLFIVANLFFLIGLAIDVYSPSFSILLLGRLFQGASTGIALPLMF HIILNFTPLEKRGTMMGVGTLTTSIAPAIGPTYGGILTSSLSWHAIFLFLIPILLLSLFM GLSAIPEIPVKKTTTLDLVSLIGIALLFSGLLMFLSKIGTLFGWLSLLAAVIGFVIFYKR ATTAEQPLVRLTILKNPAFVLFLCGFLVCQFLLLGISFVLPNFVQIVLGKNAFVAGLVML PGATVGAILAPLSGRVLDQYGAKKPILFGLSLATIGWLALTILLEMPVLLGFVAGHVTYM IGLGFAYSNMMTTGMSLLEEKDFGDGNTLFNTLQQFSGAIATAIVATIINIAQDHADNFA QGTTMGSLISLIFLLTLLVIVLIACWNYFRKKA >gi|237663595|gb|GG668923.1| GENE 60 55855 - 56640 686 261 aa, chain - ## HITS:1 COG:no KEGG:EF2771 NR:ns ## KEGG: EF2771 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 261 1 261 261 430 98.0 1e-119 MGKTLTGFHLKVIGVISMVFDHLLQFFSFLGVPGWFGWIGRIAAPIFLFESSEGFIHTSN RRKYMFRLLLGFWIMGILNGILNAYFSTGGLIINNIFGTLFLGTVYMQSMDYFKQKQIGK GLLWFIVPLLISALPFVVFSSPDILSNPAILIGFQLFNLIVPSLMMTEGGFLFVLLAVAF YLFHGKKWLQISAIGVVALISAASYNFQELFGANHQWMMILAAIPIILYNGEKGRGMRNF FYIFYPAHIAIFAIISFFMQR >gi|237663595|gb|GG668923.1| GENE 61 57014 - 57577 666 187 aa, chain + ## HITS:1 COG:SP0719 KEGG:ns NR:ns ## COG: SP0719 COG4721 # Protein_GI_number: 15900616 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 1 177 2 178 186 149 53.0 2e-36 MKKWSLQQVVLLAFLAFLFGGVFMGAGFLYALLNAALLPLGLSPFANELLFGMWTMVAPI AAMLIPRAGSAVLAEVLAALAEMLYGSYFGPSVLISGVIQGLGSESGFFVTRYKRYDTLT LFYSAIGTTIFSYVYEYFKFGYGNYGLGMNIALISVRFVSICFFGIFLTKVILRMYQSAQ GLAVKAK >gi|237663595|gb|GG668923.1| GENE 62 57574 - 58932 1065 452 aa, chain + ## HITS:1 COG:SP0720 KEGG:ns NR:ns ## COG: SP0720 COG1122 # Protein_GI_number: 15900617 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Streptococcus pneumoniae TIGR4 # 4 452 3 447 461 309 40.0 9e-84 MNSIQLKAVSFSREQPLFEKTNLAIPQGTFSLLIGDSGSGKSTLLRLIAGFAPLDYQGEI LIEGMERRQLSTREKAQKIGMLFQNPSQQFTMKTLERELIFALENLGISPEEMNRKIQTA LQLVQTQTLFTRELATLSGGEKQKAALTVLLAMNPDILLLDEPFASIDPTSRKQFIQILA RLHQAGKTILVCDHDFSDYADVVDQVVTLKNGQFEKQPLTFIKTKPQTFQLTNSVVKQPM LQLKNFRLYQGKRVLLEEKEALLFKGITTLTGPNGAGKSTLLKAIVQRQKYQGKMFLAGR RLRASKKLYQHMTLAVQQANRQFVTLTLREELLFGQNMTAEKRRKQEEALTFLGLKEKLE HSVFQLSEGQKKMVQLISLLSLDLDCLLLDEPFAGLDERACNYFVEWIKEKSAQQDFLIV THRLEPLSGVSNYRIELLHQQLIIWQEGTTCK >gi|237663595|gb|GG668923.1| GENE 63 58923 - 59576 365 217 aa, chain + ## HITS:1 COG:no KEGG:EF2768 NR:ns ## KEGG: EF2768 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: ABC transporters [PATH:efa02010] # 1 217 1 217 217 350 99.0 2e-95 MQIKQTNAAIYASLILILTFELSFSQSILANLAVFMGCIIFLIGQRKSRLLLWLFFLPLL PAIGTFWSIYLHGTSSQQAWLLFSRTYAFAGLGLAFAVGVDFEELLLLLEQKGLAPNFVY GILVVVHALPEVKREINDLKEASLLRGKTFHFWSPMLYVKTLLVAVSWRDKYTEAMSAHG YEEGATRSRKEHFVSAKVSLGLAILIIIFTNLFIFLT >gi|237663595|gb|GG668923.1| GENE 64 59588 - 60250 853 220 aa, chain + ## HITS:1 COG:L0228 KEGG:ns NR:ns ## COG: L0228 COG0819 # Protein_GI_number: 15673761 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Lactococcus lactis # 1 218 1 218 218 223 55.0 3e-58 MTFTEQAKEQAQASWQGSFQHPFITELHEGTLSPTIFRYYLIQDHYYLKHFSQLYRLIAA QTQQPRLKKLLLTNAENLALGELAIRETFFEELAITEEEVAATPIAPTAYHYVSHMYRQL IEGTPKTAAASMLPCSWLYQEIGAQLVKQHSPEPLYQRWIETYAGEEAYQHVQEERQLLD QLYEESSPQEQAAMITAFVISSEMEYAFWEMAYTHETWIG >gi|237663595|gb|GG668923.1| GENE 65 60426 - 61022 631 198 aa, chain + ## HITS:1 COG:L0265 KEGG:ns NR:ns ## COG: L0265 COG0353 # Protein_GI_number: 15672322 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Lactococcus lactis # 1 198 1 198 198 300 75.0 2e-81 MNYPEPIAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISVKRDLHFCSIC GNITEEDPCEICQDKNRDRSIILVVEEPKDVMAMEKMREYQGLYHVLHGVLSPMEGTGPE DINIASLIKRLHDDEVKEVIIATNATTEGEATAMYLSRLIKPAGITVTRLAHGLSVGSDI EYADEITLLKAVEGRREI >gi|237663595|gb|GG668923.1| GENE 66 61231 - 61869 828 212 aa, chain + ## HITS:1 COG:BH0042 KEGG:ns NR:ns ## COG: BH0042 COG0125 # Protein_GI_number: 15612605 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Bacillus halodurans # 2 207 3 207 210 217 56.0 1e-56 MQGIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRND RMDERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASI NAFATEGVSPDFTIYLDVDSDTGLRRIQENRTQQIDRLDSEGLEFHQRVRHEYLKLAEEN PQRIKKIDARMSLELVVEATYQAIIGRYPENF >gi|237663595|gb|GG668923.1| GENE 67 61889 - 62218 482 109 aa, chain + ## HITS:1 COG:lin2840 KEGG:ns NR:ns ## COG: lin2840 COG3870 # Protein_GI_number: 16801900 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 109 1 109 109 143 59.0 7e-35 MKIILAIVQDKDSNRLANEFIDANIRATKLSSTGGFLKAGNSTFIIGIDDERVDETLALI KETCQSRKQYVSTPVTLDITMDGQIPYPVEVEVGGATCFVLPVEGFHQY >gi|237663595|gb|GG668923.1| GENE 68 62220 - 63170 818 316 aa, chain + ## HITS:1 COG:BS_holB KEGG:ns NR:ns ## COG: BS_holB COG0470 # Protein_GI_number: 16077099 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Bacillus subtilis # 5 311 6 326 329 223 39.0 5e-58 MNEAQQLQQMQPLLYKQLQKSFEHGRLAHAYLFEGDTGTGKQEFGLWMAKHVFCTNLVNQ QPCNECHNCVRINENEHPDVLRIAPDGQTIKVNQIRELKAEFSKSGVETAKKVFLIQEAD KMSTGAANSLLKFLEEPEGQILAILETTSLSRILPTIQSRCQTLHFQPLVKKTLIDRLIK QGVGEKTATLLAELTNSFEKAVEISQDEWFNEAREIILQWFNYLKSNDLQAFIYVQKKMI KVFKEKEQQALSFDLLMVYYRQLLEESVATQQAKKVTEEQAERLALILKARQKWTANVSW QNVCEQLVIQMIHPKS >gi|237663595|gb|GG668923.1| GENE 69 63287 - 64126 940 279 aa, chain + ## HITS:1 COG:BH0045 KEGG:ns NR:ns ## COG: BH0045 COG1774 # Protein_GI_number: 15612608 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Bacillus halodurans # 1 249 1 249 275 321 65.0 8e-88 MVEVVGVRFREAGHIYYFAPGKSEYIYNEKVLVESQQSKQLATVAIPKKTVDSDDLPEDL KPILNKATANDLEKEQKNLADAEAAKSIANEKIRAHDLKMKLVRVEYTFDRSKMIFYFTA DGRIDFRELVKDLAAIFRTRIELRQIGVRDEAKILGGIGPCGRQLCCSTFLGDFMPVSIK MAKDQGLSLNPVKISGLCGRLMCCLKYENDEYEAAKKELPDYGKEVITPDGKGKVVGLNL LSRIVKVRLHGREIAADYDYEEIKEATAKVAAEKGDQNG >gi|237663595|gb|GG668923.1| GENE 70 64119 - 64466 409 115 aa, chain + ## HITS:1 COG:SPy0405 KEGG:ns NR:ns ## COG: SPy0405 COG4467 # Protein_GI_number: 15674542 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 109 1 104 107 75 40.0 3e-14 MDKRSLYDGLNSLETDLDSSVTQLREIKAALHELVEKNTTLEIENQRLREHLQELNKLAG NTTETEKQELSKSRMNLEKLYEEGFHVCNILYGSRRENDEECAFCLDVIYGERTR >gi|237663595|gb|GG668923.1| GENE 71 64578 - 65450 987 290 aa, chain + ## HITS:1 COG:L6615 KEGG:ns NR:ns ## COG: L6615 COG0313 # Protein_GI_number: 15672384 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Lactococcus lactis # 4 290 19 302 302 294 54.0 1e-79 MQKQKSFDKQTTKGKLYLVPTPIGNLEDMSIRCLNILKEATVIASEDTRNTQKLLNHFEI TTPQISLHEHNYKERIPQLITRLLNGETIAQVSDAGMPSISDPGHELVTACLEEELAVIA LPGPTAGMTALIASGLLPQPFTFYGFLPRKKKEQKDVLSALKEERPTQIFYESPYRIAKT VATFAEVYGQERPAVICRELTKLHEEYLRGTLGELTEYLAENTLKGECCLLVSGFTGEKE TIAAMPAISLKEHVQVLMEEEGRSSKEAIKEVAKLRNVKKQEVYKEYHSI >gi|237663595|gb|GG668923.1| GENE 72 65465 - 66127 214 220 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 193 1 199 223 87 32 1e-15 MSNLLRAEGVSYQVNGRSILSDIDLSFETGSNTTIVGPSGSGKSTFLKILSSLLSPTEGE IFYQEAPITTMPIETYRQKVSYCFQQPTLFGETVYDNLLFPFTVRQEAFNQEKVVALLQQ VKLPAAYLEKKIAELSGGERQRVALLRNIVFVPDVLLLDEVTTGLDEESKQIVNQLLNQL NKERGVTLVRVTHDTEEIQQAQQVIRIVAGKVAPTDGFSS >gi|237663595|gb|GG668923.1| GENE 73 66111 - 66869 791 252 aa, chain + ## HITS:1 COG:STM0503 KEGG:ns NR:ns ## COG: STM0503 COG0390 # Protein_GI_number: 16763883 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Salmonella typhimurium LT2 # 5 252 6 253 259 261 60.0 7e-70 MDLAVNNLSLFFSVMLVVVALIISTKEKLGFTKDIIISVIRAVIQLVAVGYLLKYVFQVN NLILTLIMVLVIVSNAAFNAKKRSQQLQKGFLISFIAIGCSTGITIGILIFSGSIKFIPS QIIPISGMIASNSMVAIGLCYRNLDTLFQNQRQAVMEKLALGATIKLASLPIIQQSVKTG MAPTIDSAKTVGIVSLPGMMSGLIFAGVDPVHAIKYQIMVTFMLLSATSIGSVIATYLAY KGYYNQQKQLVV >gi|237663595|gb|GG668923.1| GENE 74 66995 - 68113 1338 372 aa, chain + ## HITS:1 COG:SPy1846 KEGG:ns NR:ns ## COG: SPy1846 COG0389 # Protein_GI_number: 15675671 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Streptococcus pyogenes M1 GAS # 5 357 2 354 364 431 60.0 1e-121 MMSELRFPLKKDTSRKIIHIDMDAFFASVEERDHPELVGHPLVIARHPSDTGGKGVVTTA NYIARQYGIHSAMSAQKAYELCPSAIFKPGNYQKYSEISQEIREIFRRYTDVIEPVSIDE AYLDVTENKVNSKSAIKIAKMIQYDIWHELQLTCSAGVSYNKFLAKLASDFQKPKGLTVV LPEEAEDFLKALPIEDFHGIGKKTVPKMHELGIFTGADLYKQDEMTLIRLFGKMGYSLYR KVRGIHDAPVQVTRDRKSVGKEHTYGTPLTTEEQVTAQLRQLAAGVERALQRVQKHGKTV VLKVRYTDYTTITKRVTLPEYISKKEELFYQANLIWEDILGLEQGIRLLGITLTNLDPLA YENIVLPLWEKS >gi|237663595|gb|GG668923.1| GENE 75 68158 - 68754 536 198 aa, chain - ## HITS:1 COG:SP0205 KEGG:ns NR:ns ## COG: SP0205 COG0602 # Protein_GI_number: 15900141 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Streptococcus pneumoniae TIGR4 # 1 196 1 195 196 283 67.0 1e-76 MRNPKPQEWKTEDYSQKKIADYKAFNFVDGEGVRNSLYVSGCLFACEGCFNKAVQNFNYG TPFTESLMNQIIEDLSHDYVQGLTLLGGEPFLNTDVCLSVVKRVRETFGSAKDIWSWSGY TFEELLLETPDKLELLHSIDILVDGRFELAKRNLNLQFRGSSNQRIIDVPKSLAAGKAVI WEKCHDAETSYEQIKKSI >gi|237663595|gb|GG668923.1| GENE 76 68787 - 70970 1901 727 aa, chain - ## HITS:1 COG:SPy2110 KEGG:ns NR:ns ## COG: SPy2110 COG1328 # Protein_GI_number: 15675860 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Streptococcus pyogenes M1 GAS # 17 725 15 722 732 1198 79.0 0 MMKITDEKAEDVNLSTIKVVKRDGRLVTFDDQKIYDALIKAEQKIHDQVTPLTHQKVQSI VADVNREIAERFTNNVKIYEIQNIVEHTLLSNNEYALAEEYIHYRTQRDFERSKATDINV SIGKLINKDQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLKMLPSHVANAHQKGDIHYH DLDYHPYTPMTNCCLIDFKGMLNNGFKIGNADVESPKSIQTATAQISQIIANVASSQYGG CSADRIDELLAPFAERNYEKHLADAQEWIEGEERQKAFAQKKTKKDIFDAMQSLEYEINT LFTSNGQTPFTSLGFGLGTNWFEREIQRAILQIRINGLGIEKRTAIFPKLIFTIKRGVNA QPTDPNYDIKQLALECATKRMYPDVLNYDKIVELTGSFKVPMGCRSFLQGWKDEQGEEVN VGRMNLGVVTLNLPRIALEAQGSQEKFWQILNERLAIVKDALVYRVERVKEAKPANAPIL YMYGAFGKRLATQDAVDELFKNKRATVSLGYIGLYEVASAFYGGAWEDNQEAKNFTLDIL KELKKNADNWGNEYGYHFSVYSTPSESLTDRFCRLDTEKFGIVENITDKEYYTNSFHYDV RKNPTPFEKLDFEKDYPKYCSGGFIHYCEYPMLQQNPKALEAVWDYAYDKVGYLGTNTPI DHCYACGFEGDFHPTERGFECPECGNHDPKTCDVVKRTCGYLGNPQARPMVHGRHKEISS RVKHLKN >gi|237663595|gb|GG668923.1| GENE 77 71376 - 72143 290 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 222 1 219 223 116 31 2e-24 MKKIVEVNHVSKTYGRLNNKTEVLDNISFTVDEGEFVGIMGPSGAGKSTLLNVLSSIILP TAGIVRIAGQDILKMRDNQLSDFRRNEMGFIFQSFNLIDTLNVKDNILLPLAVEKVSLEE MDKRLLHVTSILGIQELLSAYPPEISVGQKQRVAAARALITNPKIIFADEPTGSLDSKSA TELLKYLAEINLHDDATILMVTHDPYTASFCNRILFIKDGAIFSEVVRQGSRKEFFNRVI DMQATIGGGGRANDF >gi|237663595|gb|GG668923.1| GENE 78 72133 - 74229 1625 698 aa, chain + ## HITS:1 COG:lin2220 KEGG:ns NR:ns ## COG: lin2220 COG0577 # Protein_GI_number: 16801285 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 2 693 3 642 646 187 24.0 6e-47 MIFKLSLKNLKAHVPNYLVYYISMTFAAVVYYCFRAIAYNQPLVAGAGRDIEIKRSLGLG STLVTIIILGFMLAANRFFIGKRSQEIGLYRLIGLRKSQVSLIFLVENLVLGFVSLINGI ILGVIFTKLFSMILAKVMFLEVPSFFYISWRSVIETGVAFAFMILIVCLRSIWMIYRYPL SQLMHQEKIGQINYSRLTKRRQFLGILGPICLLAGYFIAFDFRNLATGIVYKQLNDSLDI SIPMIITLTPFIILGLCVVGTYLFFRYTMYFIIRLFNHRKKWYYQDLRMIILGNAKRYLF KSSKTLTGLTLLIATALSGIGVMVFVYTISMHTVNSDGPVDFLVSQESYPKLKKVLDEAK DTKIKNEVTLSYKITGIERTLRIGQAQEEQETIEAVNVLSFSNYRNYQKINPYLNDLHLK NDQSVIYMDSFTNILSGMSRYGAKLQFVEGETAQLQQVLPNYLGNFLLQYSLPTIVVSDA LYQKVTKNSIQYQINAVNVDTKSREKLYEAVNKQIATEWQTPILYKYEKNNQQLSGFAKQ MPNEEAKNTQDDVTETWRLNMNDRYASLRYERKINGLTLYVSMFVAILALFITGSILMLR QLFSAVSERQDYVTLKRMGVSSKAITKQIYRQNSLIFFPPMVIGILHTTFAIYLLSQFIK SPGYLLVYLSCGILIIVYLIFYILTSAIYARMIRHIHF >gi|237663595|gb|GG668923.1| GENE 79 74433 - 74582 161 49 aa, chain + ## HITS:1 COG:no KEGG:EF2750 NR:ns ## KEGG: EF2750 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 49 1 49 49 67 100.0 3e-10 MKTTFQKILNNESLKFIGKTLFYSFIVIALIYLYHYKNINGGTFIYNEF >gi|237663595|gb|GG668923.1| GENE 80 74597 - 76117 1727 506 aa, chain + ## HITS:1 COG:SP2176 KEGG:ns NR:ns ## COG: SP2176 COG1020 # Protein_GI_number: 15901986 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Streptococcus pneumoniae TIGR4 # 4 504 6 514 516 486 50.0 1e-137 MEKVINMIQTIDEWARKEPQRPVYLTEEKVSTYGELKEKSDNLAAYLAELKTDKSAIVVY GELDFEMIVSFLGASKAGFSYIPIDAHTPKERIELILNVAKPTAVIAVHEWPELATEVPV ITAEELTEMMMHAPRHAPALTPVTGASNYYIIFTSGTTGVPKGVQISHDNLVSFTNWLLR DFGLEEGARFLAQAPYSFDLSVMSIYPALALGGSLTPLPNEIINDFKQLFTRLPQLTIDV WVSTPSFIELCLMEPSFDGEHLPALRTFLFCGEELPKPTAEKLAARFPTAHIYNTYGPTE ATVAISAIEITQEVLKSVQRLPIGYEKEDTQIYIMEGMSKLPAGEIGEIVIAGPSVSKGY LNNPAKTAEAFFQLDGVPAYRTGDAGKLVDNLLQYEGRLDFQIKLHGYRIELEEVDHHLT NVSYVKQAVVVPKYQGNKVQQLIAYVVPQAHEFSSDFQLTKAIKQELATLTMDYMIPQKF VYVEQLPLTSNGKIDRKGLMNEVNAT >gi|237663595|gb|GG668923.1| GENE 81 76114 - 77319 1199 401 aa, chain + ## HITS:1 COG:SP2175 KEGG:ns NR:ns ## COG: SP2175 COG1696 # Protein_GI_number: 15901985 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane protein involved in D-alanine export # Organism: Streptococcus pneumoniae TIGR4 # 4 401 7 412 413 359 48.0 4e-99 MMNFPHMIPYNAPYYFVLLIAALLPMILTLAIKGTRWPWYQTLVTLVFLYISFGGEFWQQ GVALIVYVIYQTLLTWGYAAYRKNKNAGWVFYLAVFLAILPLVWVKVSPFMTGKTTLLGF LGISYLTFKAVQVVMDLRDGVMKEYHPFRYIQFLLFFPTISSGPIDRYRRFEKDLKNPPS AEKYLDFLEKGIFYLFLGFLYKFIISHYLGGVFLPHVEKMALAQGGLSWWTVGYMYNYSL YLFFDFAGYSLLAVGTSYLMGYDTPMNFNKPFLSWNIKEFWNRWHMTLSFWFRDYIYMRL MFFLMKKKVFKSRIVTSNIGYFALFLIMGIWHGLTWFYIAYGLYHATLICVTDAWLRFKK KHKDKIPSNKFTHAFAVFLTFQAVCVSFLIFSGFLDKLWFK >gi|237663595|gb|GG668923.1| GENE 82 77352 - 77588 502 78 aa, chain + ## HITS:1 COG:lin0971 KEGG:ns NR:ns ## COG: lin0971 COG0236 # Protein_GI_number: 16800040 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Listeria innocua # 1 78 1 78 78 83 65.0 1e-16 MNIQETVLNILEDITGTDEVVNNQDIQLFKEGLLDSLATVQLLVEIEGQLGIQVPVSDFD REVWGTPKQIIQQVEALQ >gi|237663595|gb|GG668923.1| GENE 83 77588 - 78862 1269 424 aa, chain + ## HITS:1 COG:lin0970 KEGG:ns NR:ns ## COG: lin0970 COG3966 # Protein_GI_number: 16800039 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) # Organism: Listeria innocua # 4 411 2 413 424 280 36.0 3e-75 MSRKKRLIRILGPVLCSAVLVAVFFFAPFRINLTSEKTLKEASTSMAPNVLKGNVIKNKA VASGKYVPFFGSSELSRFSAFHPSVLSEKYQRNYRPFLLGEAGTQSLTQAMVIHSMGDAI ANKKAVFILSPQWFVKKGVPNDSFGAHYSQLQTYQWLANLTELTSGDQYLAQRLTKFPVV QKDKVLMETLANLQAGQLPQRSQRDYFIMNLRFLNREDELFSQIGMVSREPIVEKDMKQL PATYNFNELDQLAGKIAAKAINNNKFEISNGFYRQRIKPVLPKLAHSQKKWDYRFSPEYG DFQAALEQLAEKNVDVLFVIPPVNKRWSDYTGLSQDMLQQVARKLKYQLQEQGFTNIADF STCSNERYFMADTIHLGWRGWLAVDRQVDEFMKQPASKKLAYQIDDRFYQTDWQQQNPLV LPQF >gi|237663595|gb|GG668923.1| GENE 84 79075 - 80157 1317 360 aa, chain + ## HITS:1 COG:BS_ysdC KEGG:ns NR:ns ## COG: BS_ysdC COG1363 # Protein_GI_number: 16079934 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Bacillus subtilis # 8 358 10 359 361 450 60.0 1e-126 MDAKEEKMLIDLTSAKGIAGNEDEVRSLFKKYAAPYADKFLYDGLGSIIAKNVGDKEGPK VYISGHMDEVGFMVTQITEKGFLKFQTVGGWWGQVMLAQQVQIKTTTGKVYHGVIGSKPP HVLTAEVRNKPYEIADMFIDIGASSDQQVAEWGIHPGDMVTPYIDYRRMNDTKFLLAKAW DNRIGTAVSLKVLENLATEGHPNILFAGSDVQEEVGLRGAQTSTHLVNPDIAFALDTGTA GDTPGMTPKEADSVLGEGPQILIYDASMIPHKKLRDFVIQVAEENNIPFQYTVITGGGTD AGRMHLTRNGIPSLAITVPVRYLHSHTSVIHEDDYFNTVKLVTEVVKRLDKETVAKLTSY >gi|237663595|gb|GG668923.1| GENE 85 80178 - 80969 760 263 aa, chain + ## HITS:1 COG:no KEGG:EF2743 NR:ns ## KEGG: EF2743 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 263 1 263 263 431 98.0 1e-119 MKSLVTNSQHRANARRALDGQWGIMAWLTFLGVVLQSFLTSIVQNLFSGENQVFQSSFAA VLLQIFVLFALSYALYYAALKVLRGEKVRVNILMSVFQGKYYGPLFVVNLLQKVLERVIG LLFLLPILFGAGTTLYFKLMFSTVTPEEIQTFFLNDFSFFLAFGVATILIFLIGLFVSGV FQFAVWLRFDNPELPIMMALKQALYLMKNRFWQYLCLQFSFIGWYIVGFLAIGIGLLWVI PYNHVALASFYQTALEEKGLAEE >gi|237663595|gb|GG668923.1| GENE 86 81114 - 81854 1058 246 aa, chain + ## HITS:1 COG:SPy0208 KEGG:ns NR:ns ## COG: SPy0208 COG1234 # Protein_GI_number: 15674406 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Streptococcus pyogenes M1 GAS # 1 240 1 249 259 268 57.0 6e-72 MKLTVLGCLGAYPYKGEGTSSYLLESEGFHLLIDAGSTTLVRLENYLDPLKLDAVILSHY HHDHIADLGVLQYYRQLYPTLEPTPILPIYGHTQDQMHFKELTLPNVSEGKEYFEAEELA VGPFLITFMETIHPVTCYAMRIVEKATGKVFVFTGDSGYLASFEDFAKDADLFLADTYLF EGNERHHAHFTSREAGEIAKAAQVKQLMLTHLPQHGSLEQLREEAQNYAGTEIPVTLAQP DLTVEI >gi|237663595|gb|GG668923.1| GENE 87 81887 - 82891 1110 334 aa, chain + ## HITS:1 COG:lin0931 KEGG:ns NR:ns ## COG: lin0931 COG0095 # Protein_GI_number: 16800002 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Listeria innocua # 1 334 1 331 331 403 61.0 1e-112 MIFVPNENNDPRVNLAIETYLLTEMPLDEPILLFYINEPSIIIGRNQNTIEEINKEYVDE HGIHVVRRLSGGGAVYHDHGNLNFSFIMPDDGNSFRDFAKVTQPIIQALHDLGVEGAELK GRNDLVINDMKFSGNAMYATNGRMFAHGTLMFDSDIDEVVNTLKVRKDKIESKGIKSVRS RVTNIKPFLSEDKQEMTTEEFRQEILLKIFGVDSIDQVKTYELTDQDWAAINKISEQYYR NWDWNYGKSPAFNLERRHRFPIGSIEMKMNVADGAIQEIKIFGDFFGLGEIKDVEDILTG VKYDKASLEEAIDQIDVKKYFGNIEKEDLLGLIY >gi|237663595|gb|GG668923.1| GENE 88 83505 - 84194 866 229 aa, chain + ## HITS:1 COG:SPy1391 KEGG:ns NR:ns ## COG: SPy1391 COG4122 # Protein_GI_number: 15675315 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 3 227 10 233 235 226 52.0 3e-59 MRNEMMHRPVVKPELVEYMRTKQKKLPGELGAVEAEANEAGVPIIPHETVVFLQFLLGQL KPKNILEIGAAIGFSSSLMAQFVGEDGHVTTIDRFDVMIKKAKKTYQRLDLEEKVTLLEG QAAEILPTLEGPYDFIFMDSAKSKYIEFLPECLRLLPVGGVLMVDDVFQAGTILDPAEEV PKKNRAIHRKLNQFLDVVMAHPDLTSTLVPLGDGVILITKEKETIILDS >gi|237663595|gb|GG668923.1| GENE 89 84435 - 84998 704 187 aa, chain + ## HITS:1 COG:TP0509 KEGG:ns NR:ns ## COG: TP0509 COG0450 # Protein_GI_number: 15639500 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Treponema pallidum # 2 187 3 188 188 232 54.0 3e-61 MNLINQKLFDFECDAYHDGEFTRVSTEDILGKWSIFFFYPDDFSFVCPTELGDMQEHYAH LQELNCEVYSVSEDSHYVHKAWADATETIGKIKYPMLADPNGQLARFFGVLDEASGMAYR ASFIVSPEGDIKSYEINDMGIGRNAEELVRKLEASQFVAEHGNKVCPANWQPGEETIAPS LDLVGKI >gi|237663595|gb|GG668923.1| GENE 90 85095 - 86777 1798 560 aa, chain + ## HITS:1 COG:FN1984_1 KEGG:ns NR:ns ## COG: FN1984_1 COG0492 # Protein_GI_number: 19705280 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin reductase # Organism: Fusobacterium nucleatum # 3 315 2 315 332 355 58.0 1e-97 MTDEIYDLIIIGGGSAALSAGIYAGRAMMDTLIIEKDKIGGQVTTTSEIVNYPAIRHTTG PELMEEMRIQAQDFGVAFTNDEIIDVDFSQTIKTVQSASQTYQAYAVLIATGASARKIGF PGESEFTGRGVAYCSTCDGEFFQGLDIFVIGGGYAAAEEAVYLTRYGKSVTMIIREPDFT CAKLTAEAAKNHPKIKIVYNTEVKEITGDDFVRKAVFVNNQTGEETVYEAPKDSTFGLFV FAGNKPSTEIFEGKISLDRGYVPTTENMETNIPGVYAAGDLRIKELRQIVTAVADGAIAA THAQRYVTEQKTQAGQPIVTKRMTERLANQSAPETNSQQSKEKQPAKVTGKHQWFPESMR QQLSGIFAKLTKKVTLLQFLDASDEKSLELQSFLTEFASLDQKITLETILKDTEPAKELL YGIEKMPSVVLLDAAGNYTGIKFSGIPSGHEVNSLVLAVYNVGSEGQPLEASLQKNILAL PKRKIEIFVSLTCHFCPDVVAACQRIASINPHVEAEMVDISLFPELKKEKKIMSVPAMLI DGEQMIFGSKTMTEIIEALA >gi|237663595|gb|GG668923.1| GENE 91 86877 - 87467 253 196 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227519478|ref|ZP_03949527.1| ## NR: gi|227519478|ref|ZP_03949527.1| hypothetical protein HMPREF0348_2461 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2461 [Enterococcus faecalis TX0104] # 1 196 2 197 197 288 100.0 2e-76 MYSILYLFTDSLKNAWRSKKQFSTLILIFIISFLTFSALLLTLLFSRWLSQMILLDNYAV IPPLKIFRGLAGISTGTLFFFLISYICRAFFLTFLEQKNDLLILALLGTTKLQILISYAL QPIYYLIFVLPLAAFLANKLIQQFIHDFFSEVPGLMHIDSYMQGIFLPLTGSLLFICCCV FLILFRKLNRLIKKGT >gi|237663595|gb|GG668923.1| GENE 92 87588 - 88121 531 177 aa, chain - ## HITS:1 COG:CAC0738 KEGG:ns NR:ns ## COG: CAC0738 COG0847 # Protein_GI_number: 15894025 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Clostridium acetobutylicum # 1 159 1 158 306 129 43.0 4e-30 MNFYAFDFETASYDKHSACSIAIVKVENSRIVDEFYTLIKPETPFFWRNTQIHGIHESDV ANAPKFPEVWQQIQHCFQPNRLVVAHNASFDCSVLAGCLDYYGLEQPNYLSLCTVKTSRK LFPEFPNHKLNTVCENLNITLNNHHDALEDSRACAEILLQQEQRFGVEPLKKLVLVK >gi|237663595|gb|GG668923.1| GENE 93 88155 - 88910 752 251 aa, chain - ## HITS:1 COG:FN0047 KEGG:ns NR:ns ## COG: FN0047 COG0708 # Protein_GI_number: 19703399 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Fusobacterium nucleatum # 1 251 1 251 253 382 72.0 1e-106 MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLELPGYHQYWNYAEKK GYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEFFIVTCYTPNSQAELKRLAYRM TWEDAFSAYLNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQKFTELLDS GFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGS DHCPVEVVLDF >gi|237663595|gb|GG668923.1| GENE 94 89117 - 90031 862 304 aa, chain + ## HITS:1 COG:lin1972 KEGG:ns NR:ns ## COG: lin1972 COG0673 # Protein_GI_number: 16801038 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Listeria innocua # 1 298 2 298 301 193 35.0 4e-49 MKIGVIGLGNIAQKAYLPTYSKCRHLAEFVLATRNPETRQKIADQYGFTETVGTIEELIE AKIDACFVHVATKVHGAVVRQLLQAGIHVFVDKPLSEELAEVKELQALAAAKNLCLMVGF NRRFAPYTEVLKNIPEKQTIFIKKNRINTTRETSFMMYDLFLHVVDTAVYLAEGPLHVVQ SKLVEENGYLKRAILQLETEQTTIVCSMDLHSGANTETFEVTSPTGTYRLENLTHLTIQT EEEYQVKEMGDWTPTLEKRGFYQMVTAFIQAIKKPQEQELKQEKVYESHALCEEMLRQQQ RHVL >gi|237663595|gb|GG668923.1| GENE 95 90103 - 91005 1250 300 aa, chain + ## HITS:1 COG:lin1459 KEGG:ns NR:ns ## COG: lin1459 COG0812 # Protein_GI_number: 16800527 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Listeria innocua # 13 299 11 297 298 335 59.0 6e-92 MNTKAMLETLNEITLLVDEPLKNVTFTKTGGPADVLALPKTKKEVEEIVAYCREQGLSWL VLGNASNLIVRDGGIRDVVIMLTEMKEIKVAGTTMIVDAGAKLIDTTYEALAADLTGFEF ACGIPGSVGGAVYMNAGAYGGEIKDVFQSAEVLLADGTIQTMTKEDLNFRYRHSEIQELH CIVLQATFALEKGNHAEIKAQMDELTELRELKQPLEYPSCGSVFKRPVGHFTGKLIQDAG LQGLKWGGAQISEKHAGFIVNIDHATATDYVELIAHIQEVIKEKFDVELQTEVRIIGEEV >gi|237663595|gb|GG668923.1| GENE 96 91079 - 91717 612 212 aa, chain - ## HITS:1 COG:lin0562 KEGG:ns NR:ns ## COG: lin0562 COG0517 # Protein_GI_number: 16799637 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Listeria innocua # 1 210 1 210 211 254 61.0 1e-67 MLLKSVVIKKDNLTTVNESCTLEEALSILEDSGYRCVPILDESGKIFRGNIYKMHIYRHK ANGGDMSLPVTYLLKNATKFIYVNTSFFKVFFTIKELPYIAVLDENNYFYGILTHSTLLN ILAQSWNVKQGSYVLTIASVGQQGDLAAISKIIAKYSSIASCITLDVDSEEFVRRTLITL PAGTTAETCTAIVEHLERKNFKVVELENLEDE >gi|237663595|gb|GG668923.1| GENE 97 91930 - 92052 84 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MREPQTEQARAAFFVAMFFDLLYSQIYFLTVPLFEKVVKV >gi|237663595|gb|GG668923.1| GENE 98 92003 - 92155 267 50 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29377208|ref|NP_816362.1| ribosomal protein L33 [Enterococcus faecalis V583] # 1 50 1 50 50 107 100 8e-22 MATKKAALACSVCGSRNYSKSVSEGKRGERLEINKFCKYCNQYTLHKETK >gi|237663595|gb|GG668923.1| GENE 99 92176 - 92346 291 56 aa, chain + ## HITS:1 COG:no KEGG:EF2730 NR:ns ## KEGG: EF2730 # Name: secE # Def: preprotein translocase, SecE subunit # Organism: E.faecalis # Pathway: Protein export [PATH:efa03060]; Bacterial secretion system [PATH:efa03070] # 1 56 1 56 56 87 100.0 1e-16 MKFFRSVADEMKQVTWPTKKQLRKDTLVVIETSILFAALFFIMDTVIQTAFGWILK >gi|237663595|gb|GG668923.1| GENE 100 92471 - 93016 773 181 aa, chain + ## HITS:1 COG:BH0118 KEGG:ns NR:ns ## COG: BH0118 COG0250 # Protein_GI_number: 15612681 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Bacillus halodurans # 5 180 2 178 178 218 62.0 6e-57 METFERNWYVLHTYSGYENKVKANIESRAQSMGMGDYIFRVVVPEETEKEVKNGKEKEIV HKTFPGYVLVEMIMTDDSWYIVRNTPGVTGFVGSHGAGSKPAPLLQEEINHILRSIGMST RQSDLEVTLGDTVKIIEGAFSGLEGVVTEIDEEKQKLKVNIDMFGRETSTELDFEQVDNI D >gi|237663595|gb|GG668923.1| GENE 101 93135 - 94013 981 292 aa, chain + ## HITS:1 COG:lin0949 KEGG:ns NR:ns ## COG: lin0949 COG4814 # Protein_GI_number: 16800018 # Func_class: R General function prediction only # Function: Uncharacterized protein with an alpha/beta hydrolase fold # Organism: Listeria innocua # 29 292 36 298 300 182 37.0 6e-46 MKQAKKYRYFSLLMGLVLLLSACQIGATTKNDNQAPTKEATVELNRTTTPTLFFHGYAGT KNSFGSLLHRLEKQGATTQELVLLVKPDGTVVKERGALSGKATNPSVQVLFEDNKNNEWN QTEWIKNTLLYLQKNYQVNKANIVGHSMGGVSGLRYLGTYGQDTSLPKIEKFVSIGAPFN DFIDTSQQQTIETELENGPTEKSSRYLDYQEMINVVPEKLPILLIGGQLSATDLSDGTVP LSSALAVNALLRQRGTQVTSQIIKGENAQHSQLHENPEVDHLLIEFLWPSKK >gi|237663595|gb|GG668923.1| GENE 102 94106 - 94828 387 240 aa, chain - ## HITS:1 COG:no KEGG:EF2727 NR:ns ## KEGG: EF2727 # Name: not_defined # Def: phosphosugar-binding transcriptional regulator, putative # Organism: E.faecalis # Pathway: not_defined # 1 240 1 240 240 431 98.0 1e-119 MNLDYLKETYHLTKTESQILYYLDQQSTNAADLSIREVAKHCFSSPSSIIRLAKKLNLSG YNELIYKLKEAHFSQPIPYETAPSFETTNEFCRLLAKHKSHLFVILGHDFSRHLAAYISE VFNFHGIPSITTAHTHSINSQNNQNFLFIILSHSGEEKYLKETALLAKEKKHPIISFVGA KNSTLGRLADLVFSTDSYSPFSTSVAQPQMFFGQTLITFEALICAYLNHEDYIPISPKNK >gi|237663595|gb|GG668923.1| GENE 103 94906 - 96534 1635 542 aa, chain + ## HITS:1 COG:lin2300 KEGG:ns NR:ns ## COG: lin2300 COG4166 # Protein_GI_number: 16801364 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Listeria innocua # 30 533 41 550 559 367 39.0 1e-101 MKRATKQRLSLAAIIVLLLSGCGNVGKETKKQEQQVLRVGIDSELSTADVSLAMDNTAAD VMSQVGEGLFSFDEKGEAKPALATEKVQPSNDGLIYTFTIRKDAKWSNGEPITANDFEYS WKRTVDPKTASPQAYYFEGLKNYRAIVDGGKSKEELGVTAIDDHTLEVELSYPMSYFQQL LAVPAFYPLNEAFVEKTGKNYGTSAESTLYNGAFTLEGWDGTNNTWSYVKNKNYWDQANV SLDKVDVQVVKEVNTGKNLFEGKELDVVKISGEIVAQEQGNAALKIREIPGTYYIQLNTQ KDLLANKNARRAIALSLNSERLAKNVLNDGSKKALGFVPTGFTNQETQKDFAEELGDLNP SEPEKAKELWQTAKKELGIEKAELTILSSDTENAKKISEYVQGALADNLENLTVNVSPVP FNNRLEKSRSGDFDIVVGGWTPVYADPIDFLNLLQSKNSNNFGKWSNKTFDQLLQEANVT YANKYEERWKTLQKADQLVAEEAPLVPLYQLTEARLVDDSVQNLVYGPLGSGYYKSVSIG DK >gi|237663595|gb|GG668923.1| GENE 104 96548 - 97651 1150 367 aa, chain + ## HITS:1 COG:BH3132 KEGG:ns NR:ns ## COG: BH3132 COG1363 # Protein_GI_number: 15615694 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Bacillus halodurans # 5 357 6 358 361 217 34.0 3e-56 MKKSQAVQLIQELSNANGVSGFETEVVRILQHATADFTIQRLDAIKNLYLEKKNNLSEGP VVLFDAHSDEVGFMIQAIKENGLLRFLPLGGWVPNTISAQKVRIRNREGTYLPGVVTSRP PHFMTPEERQRPLTIADLTIDIGATSKEEVIETYKIDLGAPVIPDVTCCYNEQTDLFLGK AFDCRIGCACLVDVMEELKEETLPFKLVATVTAQEEVGERGALIAAKQVNPDLAIVFEGC PADDTAETPEMIQSAMGKGPMLRYFDVSMITNPEFQEYALEIAKIHKIPVQVSVRSGGGT NGMAITQVQGAPTIVVGIPVRYAHTPHCYVDFQDYQAAKELVIQLIKNLDADKIQALVQP LSKEWNK >gi|237663595|gb|GG668923.1| GENE 105 97648 - 98493 948 281 aa, chain + ## HITS:1 COG:PH1582 KEGG:ns NR:ns ## COG: PH1582 COG2362 # Protein_GI_number: 14591360 # Func_class: E Amino acid transport and metabolism # Function: D-aminopeptidase # Organism: Pyrococcus horikoshii # 1 274 1 266 278 120 28.0 4e-27 MKIYVSCDIEGLAGIATFDMEKEDTVLFRELYHQHVAWLIEGIQKSAKNEQITEITIADS HSRGLNLAYARLAEMDEQISLVSGFPRMDYMMSGLDSSYDVVFFLGYHAGIGKQKGNMDH GYSASVAYDLKINELAMNETTINAAYASELGVPVGLIIGESGLEEQLFQEQMMPEVPFVS TKESLGRYAIKNRPMQQVREAIVATTSQVLTSFALSELPRYALQTPATVKLQCVTTAQAD RIEMLPMIKRIDGRTVSFVGETMKDVMNGIVAVVGLGGTSD >gi|237663595|gb|GG668923.1| GENE 106 98558 - 99430 1092 290 aa, chain - ## HITS:1 COG:L44083 KEGG:ns NR:ns ## COG: L44083 COG1760 # Protein_GI_number: 15672813 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Lactococcus lactis # 1 286 1 286 287 330 65.0 3e-90 MFYSIEDLVAQAKEYPSVSELMIATEMAHGGYSRERIIETMEKNLAVMKQSVAEGIAGVT SVTGLTGGDATRLNDYIHSGNFLSGETILQAVRNAIAVNEVNAKMGLICATPTAGSAGVV SGVLLAVIDRLKLTHQQQLDFLFTAGAFGLVIANNASISGAEGGCQAEVGSASAMASAAL VAASGGTPDQSAQAVAITIKNMMGLICDPVAGLVEVPCVKRNALGSSQAFISADMALAGI RSVIPPDEVIHAMYQVGRQMPQIFKETAEGGLAVTPTAQRLSKEILEKQK >gi|237663595|gb|GG668923.1| GENE 107 99453 - 100121 657 222 aa, chain - ## HITS:1 COG:L43452 KEGG:ns NR:ns ## COG: L43452 COG1760 # Protein_GI_number: 15672812 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Lactococcus lactis # 1 222 1 223 223 291 61.0 8e-79 MEELRFNSVFDIIGPVMIGPSSSHTAGAARIGKVVRSIFGQQPDSVDIYLYESFAKTYRG HGTDIALVGGLLGMEPDDEQLANSLEIAYEQGMEVCFIPKSEKADHPNSVKIVVSSGDRK LSVTGISIGGGNIQISELNGFKLSLSMGTPTFIVVHQDVPGMIAKVTNILSASDINISTM TVTRESKGEKAIMIIEVDQAEVGDIVMQLAEIPHIYSVNYFD >gi|237663595|gb|GG668923.1| GENE 108 100497 - 101993 1503 498 aa, chain + ## HITS:1 COG:L119564 KEGG:ns NR:ns ## COG: L119564 COG0488 # Protein_GI_number: 15672881 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Lactococcus lactis # 1 497 1 511 513 483 51.0 1e-136 MSKIELKQLSFAYDNQEVLLFDQANITMDTNWKLGLIGRNGRGKTTLLRLLQKQLDYQGE ILHQVDFVYFPQTVAEEQQLTYYVLQEVTSFEQWKLERELTLLNVDPEVLWRPFSSLSGG EKTKVLLGLLFIEENAFPLIDEPTNHLDLAGRQQVAEYLKKKKHGFILVSHDRAFVDEVV DHILAIEKSQLTLYQGNFSIYEEQKKLRDAFELAENEKIKKEVNRLKETARKKAEWSMNR EGDKYGNAKEKGSGAIFDTGAIGARAARVMKRSKHIQQRAETQLAEKEKLLKDLEYIEPL SMDYQPTHHKTLLTVEELRLGYEKNWLFAPISFSINAGEIVGITGKNGSGKSSLIQYLLD NFSGDSEGEATLAHQLTISYVRQDYEDNQGTLSEFAEKNQLDYTQFLNNLRKLGMERAVF TNRIEQMSMGQRKKVEVAKSLSQSAELYIWDEPLNYLDVFNHQQLEALILSVKPAMLVIE HDAHFMKKITDKKIALKS >gi|237663595|gb|GG668923.1| GENE 109 102116 - 102538 679 140 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29377197|ref|NP_816351.1| ribosomal protein L11 [Enterococcus faecalis V583] # 1 140 1 140 140 266 99 1e-69 MAKKVEKIVKLQIPAGKATPAPPVGPALGQAGINIMGFTKEFNARTADQAGLIIPVVISV YEDRSFTFITKTPPAAVLLKKAAKIEKGSGEPNKTKVATVSSDQVKEIAELKMADLNAAD VEAAMRMVAGTARSMGIIVE >gi|237663595|gb|GG668923.1| GENE 110 102650 - 103339 1156 229 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29377196|ref|NP_816350.1| 50S ribosomal protein L1 [Enterococcus faecalis V583] # 1 229 1 229 229 449 100 1e-125 MAKKSKKMQEALKKVDATKAYSVEEAVALAKDTNIAKFDATVEVAYKLNVDPKKADQQIR GAVVLPNGTGKTQTVLVFAKGEKAKEAEAAGADFVGDDDMVAKIQGGWFDFDVVVATPDM MATVGKLGRVLGPKGLMPNPKTGTVTMDVTKAVEEVKAGKVTYRVDKAGNIHVPIGKVSF DNEKLVENFNTINDVLLKAKPSTAKGQYIKNISVTTTFGPGIHVDQASF >gi|237663595|gb|GG668923.1| GENE 111 103661 - 104161 786 166 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227519497|ref|ZP_03949546.1| 50S ribosomal protein L10 [Enterococcus faecalis TX0104] # 1 166 1 166 166 307 100 5e-82 MSEAAIAKKESLVQEAAEKFESAASVVIVDYRGLTVEEVTNLRKQLREAGVEMKVIKNSI LSRAAKKVGLDGLDEVFTGPTAVAFSNDDVVAPAKIIDEFAKDAKALEIKGGVIEGKVSS VEQITALAKLPNREGLLSMLLSVLQAPVRNVAYAVKAVAEKNEEVA >gi|237663595|gb|GG668923.1| GENE 112 104224 - 104592 573 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227519498|ref|ZP_03949547.1| ribosomal protein L7/L12 [Enterococcus faecalis TX0104] # 1 122 1 122 122 225 100 3e-57 MALNIENIVAELETATILELSELVKAIEEKFDVSAAAPVAVAGPAAGGAAEEQTEFTVEL TAAGDQKVKVIKAVREATGLGLKEAKAVVDGAPAPVKEGVSKEEAEALKAALEEVGASVT VK >gi|237663595|gb|GG668923.1| GENE 113 104640 - 105470 684 276 aa, chain - ## HITS:1 COG:BH2229 KEGG:ns NR:ns ## COG: BH2229 COG2207 # Protein_GI_number: 15614792 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 6 275 2 279 287 98 28.0 1e-20 MQNVFTNNVSILINDQPISQEFHLYEAGYEKCRPTKPTEFAPINYWVLHYCSDGEGYFST PFMEKQHITAGDLFMIPANCRNIYYPNRQNPWTYHWVGFVGDLSSQYLEKIGLTTENCIL KGTVDKKLESLFKNIYQEAKKHNHFGSLSESFQLLNYLEHHSVTQHENQSQQLFNQIKMA IHENFSNNLSISQLASEYNIDRSYLFKLFQRYEQTNPSIYVQNLKLQKACSLLRKSSLTI TEISFEAGFSSPSYFSKFFFQKKEMTPRQYRQQFLT >gi|237663595|gb|GG668923.1| GENE 114 105619 - 107118 1581 499 aa, chain + ## HITS:1 COG:ECs3960 KEGG:ns NR:ns ## COG: ECs3960 COG0531 # Protein_GI_number: 15833214 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 478 1 457 477 338 41.0 1e-92 MATHSRERLGSVALMLMTFSAVFAFPSIVNNSIQIGLATIPGYLFGSIFYFLPFILMIAE FASANSENESGVHSWLESVLGPKWAFLGAWSYFFVNLFFFCSLLPNTLIYGSYAFLGQNV FQGNHSTKIIAVISILLFWLMTWVCIKGVSWISKVTSLAGGARLFMGVAFVVLAFVVVFG FGNEPAQEFTTTSIMPTFNWTFFMTMAWILQAVGGGESIGVYIKDVKGGNKTFVRTMIGA TIAVGIMYILGAVAVGLVVPTDVLKGNFSNGIFDIFKILGTYFHIPAAMMVRLVGIILFV GSLGSLALWTAAPVKVFFSEIPDGVFGKWLVKTNEEGNPTNALLVQGIIVTILVAIPALG IGNMDSFLETLINMTASTSLVPVLFLLIAYIGLRWKKETMPRSFRFGNRTFGLIAGIFLL AIFIFVFFMSTVPDPKLIMEEINGTLPKGTASPLGMLAYNIIGLIVFMGFAWICWKRYET KEKNEVGKGEMDYEDLGKL >gi|237663595|gb|GG668923.1| GENE 115 107096 - 110173 3152 1025 aa, chain + ## HITS:1 COG:ECs3958 KEGG:ns NR:ns ## COG: ECs3958 COG3250 # Protein_GI_number: 15833212 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli O157:H7 # 1 1015 13 1023 1042 740 38.0 0 MKTWENYKVDSINRLAGRAHFSSFPSKETALLNENKYTQAYKNLNGRWHFLFLEAPEYSP ENFFATDFDTSQMDQITVPGNWQVQGYGKMHYSDLWYNFPINPPYVPTENPTGIYKRTFA IDETFHDKKIILRFCGVDSAYHVWVNGHEVGYSKGARNEAEFDITPYAKIGETNDLTVRV YQWSDGTYLEDQDMWWLSGIFRDVELLGVPENGLEDFFVISDLDDSYQNGHLAITGKFWQ DKGQQVQLELMDQQGKTVLKETVAGNQGTVEFSASLPSVTAWSAEKPYLYQLFITVFSEG EVVEVIPQKVGFRNIHVSGETFLVNGVAIKLKGMNRHDYNPKNGRVVSREEIEKDIRLMK QFNINAIRTSHYPASAYFYDLCDEYGMYVIDETDLECHGFELTGEYDWISNDPEWETAYV SRMVRMIQRDKNHPSILFWSLGNESAFGHNFIEMARIAKEMDPTRLVHYEGDFEAEVTDV YSTMYTWLEHPTRELLMNTIIENSKKPHILCEYCHAMGNGPGNLKEYQELFYAHDKLQGG FIWEWFDHGIESVTDNGEVYYRYGGDFGDDPSNKDFCIDGMLMPDRTPSTSLYEYKKVIE PITTSAIDVLSGEFSLLSRFDFENLAIFKLVYTITEDQTVIQSGTVAVPAIAARAEGRLH LPYHLDFPKKAGAAYYLTLSYQLKETTAYASAGHELATAQFELPIATPGIEITPVGSLMA KEIGPHLYIEGPNFSINFDKVKGALTNVTRDGKKLLHKGPKFTFWRAPISNDMEIIDEMK KKYFLHLEHEIVRSFEWKKVDDFIQVIVKTINGTTNSAWHYQCTYQYLIAPNGEIFFDLK GSPAGKIENAPDMLPRLGVTLHLDKSLSEVKYFGKGPRENYVDSQEAGLLGVYDATVAEM FTNYVVPQANGNHMATKWSAFTDDRGQGVVATAADSYNFSVSYFEEQALDVAKHTNELQE SDYVVLNIDYKQNALGSYSCGQWQLEKYRTTFEEFQLAFRLTPFNNKEIQATDVAHERVK RPTIS >gi|237663595|gb|GG668923.1| GENE 116 110354 - 110602 381 82 aa, chain + ## HITS:1 COG:L144047 KEGG:ns NR:ns ## COG: L144047 COG2261 # Protein_GI_number: 15673874 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 4 82 2 80 80 77 73.0 7e-15 MHTLWVLIVGAVIGAIAGALTSKGQSMGWIANIVAGLVGSFIGEKILGSWGPHVAGMAIV PSIIGAVILVAVVSFFFGRKNS >gi|237663595|gb|GG668923.1| GENE 117 111098 - 112468 1542 456 aa, chain - ## HITS:1 COG:lin1815 KEGG:ns NR:ns ## COG: lin1815 COG2265 # Protein_GI_number: 16800882 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Listeria innocua # 1 456 1 457 457 526 56.0 1e-149 MTQQLVKKGQQISLKIKRLGINGEGIGYYKKLIIFVPGALPKEEVTATITNVTPKFAEGT LQSVKKAAKDRVVPPCPVYETCGGCQLQHLAYKAQLDFKKDLLKQALNKFKPVNYQNYEL RKTIGMENPWNYRNKAQFQLRQIDGQVEAGLYQADSHQLVPIDNCLVQQPATTKVMNTLV DLLNDFQLPIYDERKNSGIFRTLMVRVGIQTGEVQVVFITQSQKFPQKEKMVRAINEQLP EVVSIMQNVQNKKTSLVMGDDTLHLWGKESIEEHINDVVFDLSPRAFFQLNPEQTEILYN EGIKALDLQPNETVVDAYCGVGTIGLSLAKQAHQVRGMDTIPAAIDDARFNAKRLGVTNT HYAVGTAEDLLPKWFKEGFKPDAIVVDPPRTGLDRKLLTALLKQPPKKMVYISCNVSTLA RDLVQLAKVYQVNYLQSVDMFPQTARCEVVVKLTRK >gi|237663595|gb|GG668923.1| GENE 118 112600 - 113400 824 266 aa, chain + ## HITS:1 COG:BS_yfhG KEGG:ns NR:ns ## COG: BS_yfhG COG2137 # Protein_GI_number: 16077919 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 261 1 263 264 132 34.0 9e-31 MTTITRISKDKGEFYLLWLSSGEKLRVSEDILVRQRLLKGQELSDTLIEEIKKASSYDVG LQMAMNYLSYQLRSKKEIFTYLKEKEIVPEDQVKIVQRLEELRLLDDAIFSESYVRTAMR TSDKGPRNVAQQLKQKGISEEDIQHGLTFYTLDEQLNVATATAEKAMKRYRTKSFKDALQ KTRLHLMQKGFTNEIIDLALESLAFEKDEEQEQQALNKEGERLWRANQRFDFSKKVQKVK QSLFQKGFDYDLVQQFISEKEVEHDE >gi|237663595|gb|GG668923.1| GENE 119 113390 - 114574 1246 394 aa, chain + ## HITS:1 COG:SP1228 KEGG:ns NR:ns ## COG: SP1228 COG1194 # Protein_GI_number: 15901090 # Func_class: L Replication, recombination and repair # Function: A/G-specific DNA glycosylase # Organism: Streptococcus pneumoniae TIGR4 # 10 389 2 373 381 362 49.0 1e-100 MTNKEPWEAWSPEKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIMLQQTRVDTVI DYFYRFMEWFPTIQDLAEAPDDKLLKAWEGLGYYSRARNLKVAAQQIVSEFGGKMPDTIE DIRSLKGIGPYTAGAIGSIAFNLPEPAIDGNVMRVVSRLFEIDADIAKASNRKVFEAAML KIIDRERPGDFNQALMDLGSAVCTPTSPKCESCPLQQYCAAYQADKMTAYPVKSKKVKPK DVYYVGTIIENKKQEFLLEQRPETGLLANMWLFPIEEISKKQFQQLQKMAQPAETEKQLT LELEPVTEPLVAEEPVNVFADYETVVWQKRALGEVVHIFSHLKWHILVFYGRNTGELATL ESQRWVAAQQFSEYVFPKPQQKMVELFKKEHKNK >gi|237663595|gb|GG668923.1| GENE 120 114755 - 115879 998 374 aa, chain + ## HITS:1 COG:lin2662 KEGG:ns NR:ns ## COG: lin2662 COG1316 # Protein_GI_number: 16801723 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 3 309 17 333 349 155 32.0 1e-37 MSRKRKISLISLVIILFFVTVGSAYFAVAGSYLKKTIDKGYVPIKNDYTEAQNKDSQSFL VMGLDNTIERKLGTTRTDAMMVITVNNKTKKITYLSLPRDSFVQIDAKNYQGMQRIEAAY TYDGPTASVNTVEKLLNIPINHYVVFNFLSFIKLIDAVGGIDVNVKQAFDGVTKDGPGSI HFDAGKQHLDGTKALSYARERHSDNDIMRGFRQQEIIQAVEDKLKSGQSIMKIMDIIDSL NGNIQTDVDSNELTHLVKEGLTWTNYDKQQLSFDWRTFSNEGRSMVELYPDSIENVRHQL RVSLNLEKPDERDQDGYVFHTNGEFLYQSDYTVQDEAAEENEMTSINGNTYIGVPGNTQT GPLPSVKTENGFIK >gi|237663595|gb|GG668923.1| GENE 121 116071 - 116502 506 143 aa, chain + ## HITS:1 COG:no KEGG:EF2702 NR:ns ## KEGG: EF2702 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 143 1 143 143 272 100.0 3e-72 MFSYTDTILSIMQRIEVYNEIFKAISKEVQEYGCNQAAHRRGRDTYMFCRNNVNRFFTEE MMFRKNLEPYYDKEATKILLEGLDTYKEGVFFWLEALSESCQVTDELKYQLGIRQKESSY LLINQACKEACEGIQSAHSVHKM >gi|237663595|gb|GG668923.1| GENE 122 116547 - 117071 702 174 aa, chain - ## HITS:1 COG:L36177 KEGG:ns NR:ns ## COG: L36177 COG0454 # Protein_GI_number: 15674159 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 3 173 2 167 169 125 39.0 4e-29 MTVYLRKAEPSDLPDILAIIEDGRRTLQKSGIPQWQNGDGPNQEILAKDIDQQTCYILMV DNALAGVGVLCSEIDPAYEAIFNGSWQPHSQATYTAIHRVALKSSFQGQGLALVLLRLLI TAARLQGATDIRIDTHPQNLAMQHLIKKAGFVYQGDVILDVNDGERYAYQMILK >gi|237663595|gb|GG668923.1| GENE 123 117088 - 117909 940 273 aa, chain - ## HITS:1 COG:CAC1777 KEGG:ns NR:ns ## COG: CAC1777 COG1051 # Protein_GI_number: 15895053 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Clostridium acetobutylicum # 34 265 25 294 307 124 33.0 1e-28 MPRFASKAEEKNYYERQASLAEFLTWYHQQELPEYEKPSLTVDMVLLCYNKEADQLKVLL IQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQLHSFSRPDRDPR GWVVTVSYLAFIGEEPLIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGKD TLAFDHSEIIIKAFNRVVDKMEHEPQVLQVLGKDFTITEARKVFAKFLGVDYRSIDHSNF KKAMTQYFEELGERPVGIGRPSKIYQLKTTTGF >gi|237663595|gb|GG668923.1| GENE 124 118072 - 119259 1642 395 aa, chain - ## HITS:1 COG:lin2081 KEGG:ns NR:ns ## COG: lin2081 COG3853 # Protein_GI_number: 16801147 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tellurite resistance # Organism: Listeria innocua # 1 393 1 398 399 377 62.0 1e-104 MTEQQPKETTSVTNTLDDLLSNPFSSMDELTPTQQNELSELKEQQAAPRLIDKLPQERQA QAKELASKIDVQDSQAVITYGSNAQIKLGEFSQAMLNHVQAQDIGPVGDSLTDLMFRLNE ANPNELRAGEGNFIQKMLGKVKQSVYEITAKYQKIGAQIDKIAVKLTHEKDGLLKDNAML DQLYQKNKDYFDALNIYIAAGELKAEELRTQIIPEAMKKAEESGDQMDVQIVNDYNQFLD RLEKRTHDLRLARQITIQQAPQIRLIQNTNQALAEKIQSSVNTAIPLWKNQVVIALTLLR QKDAVTAQRQVSETTNDLLKKNSEMLKISAIETAKENERGLVDIETLQKTQNDLIETIQE TLRIQQEGKEKRQAAEIELGHMEEDLKNKLLELTQ >gi|237663595|gb|GG668923.1| GENE 125 119279 - 119959 758 226 aa, chain - ## HITS:1 COG:lin2080 KEGG:ns NR:ns ## COG: lin2080 COG4915 # Protein_GI_number: 16801146 # Func_class: R General function prediction only # Function: 5-bromo-4-chloroindolyl phosphate hydrolysis protein # Organism: Listeria innocua # 71 226 62 217 219 88 28.0 1e-17 MNKLNTKLLIGYILLGALIIAVAREYGFFAFVILVGFLVFVLYRKKKNAADKSDQMPYLT KDKEAHYRELGLSPQEIDFFRSTMSTAKKQIIQLQENMNRSTKLRAIDLRNDTTKVSKAL FKELVKEPKKLHLANHFLYTHLPNIVDLTSKHLEIEQHEVKNKQTYEKLEESAQIIDQLS KLVKNDYEEIVSDDLDDLDVEMSIAKSSLSQKAATEESPQVNEDQQ >gi|237663595|gb|GG668923.1| GENE 126 120362 - 120946 584 194 aa, chain + ## HITS:1 COG:lin2079 KEGG:ns NR:ns ## COG: lin2079 COG0494 # Protein_GI_number: 16801145 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Listeria innocua # 5 185 2 180 185 181 54.0 5e-46 MLNYEDFEEKTLQRREIFKGKIIDVFLDDVALPTGGTAKRELVFHSGAVAMIPLTAEGKI VLVKQFRKPLEQVILEIPAGKIDPGEENQLEMTAMRELEEETGYRAGQLTYINSMYLSPG FANEKLALYLATDLQKVENPRPQDEDEILELYELTIAEAKAEVAKGTICDAKTLFAIQYW ELYLLQRQFKEDTQ >gi|237663595|gb|GG668923.1| GENE 127 120943 - 121239 379 98 aa, chain + ## HITS:1 COG:no KEGG:EF2695 NR:ns ## KEGG: EF2695 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 98 1 98 98 103 100.0 2e-21 MSKGPLVTRTELRKRREAEEKEAERRQQEEQKLAEKAYKRKEKEISTFYRKEKKKQKPIN KSRVGEYSKRRERSTWLNKAIIIVAILLAVVAYIVLNL >gi|237663595|gb|GG668923.1| GENE 128 121255 - 121950 1014 231 aa, chain + ## HITS:1 COG:L132777 KEGG:ns NR:ns ## COG: L132777 COG0775 # Protein_GI_number: 15673862 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Lactococcus lactis # 3 231 36 259 259 217 53.0 1e-56 MKIGIIGAMDQEVKILKEKLTDTMSWERAGALFVSGSLGRHEVIVVRSGIGKVASAVTTT LLIHQYGVNMVINTGSAGGIGEGLKVGDLVIADKLAYFDVDVTGFGYAYGQLPGGVPLYF ETSEYLRMEIAKAAEKTGLAIRKGLIVTGDTFVDSAEKIAKIKKEFPEALACEMEGAAIG QAASQFNIPFLVVRAMSDTADGEATQSFDEFIDEAGKKSAEMVIHFVENLV >gi|237663595|gb|GG668923.1| GENE 129 122018 - 122284 257 88 aa, chain - ## HITS:1 COG:lin0209 KEGG:ns NR:ns ## COG: lin0209 COG2827 # Protein_GI_number: 16799286 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Listeria innocua # 1 84 1 82 90 83 64.0 1e-16 MENKKSHYFYVLLCQDGSFYGGYTTEPERRLTEHNSGTGAKYTRLAKRRPVKMIHTEKFE TRSAATKAEAAFKKLTRKQKEQYLKTFH >gi|237663595|gb|GG668923.1| GENE 130 122274 - 123008 875 244 aa, chain - ## HITS:1 COG:SPy1411 KEGG:ns NR:ns ## COG: SPy1411 COG4123 # Protein_GI_number: 15675331 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 243 5 247 258 280 55.0 1e-75 MLLSGERIDQLYADDIQIIQSKEVFSFSIDAVLLANFPQLPKKGKIVDLCAGNGAVGLFV SRKTAAKIDQIELQPRLADMGQRSILLNKLEKQVTMYERDLKQATEVIKKDSVDLVLCNP PYFKERPTSQKNPNPHLAIARHEIHTSLQEVVTVSADLLKTNGRLAMVHRPDRFLDILHA MENANIAPKKARFVYPKPGKEANVLLIEGIKQGKKDGFRVLPPLFTYNEKNEYEAEMKAM LYGE >gi|237663595|gb|GG668923.1| GENE 131 123197 - 123823 760 208 aa, chain + ## HITS:1 COG:SP1624 KEGG:ns NR:ns ## COG: SP1624 COG0204 # Protein_GI_number: 15901460 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 195 1 196 249 245 57.0 5e-65 MFFTFMRGVVRVILFVINGNAHYENKEKLPKDQNYVLVAPHRTWWEPLYLAVAGSPKKFS FMAKKELFKNPVLRFILKHANAFPVDREKPGPSAIKTPVKILKNSDLSLIMFPSGTRHSS ELKGGVALIAKMGRVPIVPSVYQGPLTLKELFKRKKVTVRFGDPIDISDIKKMDKDGLAE VERRMQEAFDQLDKEIDPTFKYDSTEKE >gi|237663595|gb|GG668923.1| GENE 132 124007 - 125143 1055 378 aa, chain + ## HITS:1 COG:L0327 KEGG:ns NR:ns ## COG: L0327 COG0420 # Protein_GI_number: 15673304 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Lactococcus lactis # 1 378 1 390 390 264 41.0 2e-70 MKFLHTADWHIGKKLHGFDLLAEQREAFKQILAIAKEEQVDAVVIAGDLYDRSVPAVEAV EVFNEMMIQMNLKEHFPVLAISGNHDSSTRLETGGPWFNQTQFHLNTRLEQAFQPIEIDN TQFYLLPYFEPIAARLYFEDETIRTIQAAMEKVVAKMQESFLPNKKQVLVSHFFVAGSEK TDSETKLTVGGLDVVPTALLEPFDYVALGHLHGKNALQAPNARYSGSPVKFSLSEMTQEK GVWLVETETEVHFQFRALKPLRDIQQLTGSFQQLTDPAFYQEVNRENYLHVQLTDRAIIP NMMNQLRKIYPKIIGLERLNGRETSNGNQKKVVQIEQRSPEEHLHDFFNDVTGEALTEQQ AQWVQEELSTLNQLERGK >gi|237663595|gb|GG668923.1| GENE 133 125148 - 128285 3321 1045 aa, chain + ## HITS:1 COG:L152588 KEGG:ns NR:ns ## COG: L152588 COG0419 # Protein_GI_number: 15673303 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Lactococcus lactis # 1 1040 1 1041 1046 304 29.0 7e-82 MKPLSLTLKNFGPYINETIDFTKFEDSSLFLISGKTGSGKTTIFDGMSYALFGESSGKLR LGKEMRSTFADPSEATEVTLLFKHNEYLYELNRLPEQELFKKRGTGVRKQSAKISLIVKD AQGKELRAYSKRREVDELIQELLHLNANQFAQIVLLPQGEFRTFLIAKSDEKEKVLRNLF GTELYQLFSENLKERLKIANQEIQETQQKIELKTEQLHWSEEPEPTMTLFEKLQLLESQQ QEAQQQLLVEREQIATLKQAKQAKEQVRYAIEERQNLQQQKEELLEKKAKQAEQETVIER LKEQIQQLKWSQKQQSLAEKVFEKRSEKQQKEQETKSKQQALMETQQALTDWQAIMSELE EQQPLIAEKQERLQTIQRQLPQYQEYEQLAQRKIAEQANYQAIQEEYESCQQEKITLEDK VATAKQFIEQEGTLEKANFECSSVADHWQNFVERWQKNQKAWQKISQNQAELHELTQRFA VEQQQKSAEEAKLQTKKSQWASLQIQRLSLLLEEGAPCPVCGSLEHPKQQTHQEVSLEEI DQAERELTEVEKTVQRFTETLSALGAEKQQKESQLQEQEAAYTEEQEQLAAQFADLQLPL TGLTFSQVTPAEIAEVESQLAKEKQRIAQKLTEISVEKDHLAELEEQVAENSQRFEVLRQ QVETMQQSLERITIQQQMIASQLLDATVTYEEMTKQQTLLQEELSAFERQKENVTTQGET LKKEEMILESTLTHLEKEQQTLQQTVAQLESQLNAILTEQGVTEDQLTEWLKEVPTLESQ QEQISLFEQEQTQLTIQLAEIEKKLSSDTFPELSLITTEIEQITQQIEEQEKKYYQLHEK MLNNQQLVQEINAQRTTIEDKFEEVAALQQLADTVNGNNPKKISFERYMLQTYLERVLTV ANQRLDRLTNSRYQFELNHEAGSYRNQTGLEINIYDDNSGTVRSAHTLSGGESFIAALAL ALSLAEVIQEQAGGVLIDALFIDEGFGSLDEEALEMAMEALETIENEGRMIGIISHIGEL KARIPQQLQIKSNGNGQSTVHYQLA >gi|237663595|gb|GG668923.1| GENE 134 128305 - 131502 3339 1065 aa, chain + ## HITS:1 COG:lin1685 KEGG:ns NR:ns ## COG: lin1685 COG0553 # Protein_GI_number: 16800753 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Listeria innocua # 5 1063 12 1065 1072 637 35.0 0 MKWSIPERIVEQGREYMQEGRVLSIVQNPEKRIWLSEVLGEELYLVELDGTAKEQDVCEC QYWMEHGYCKHTVAVELALKQRGVSRIIQANQTVSFEKTNRSTAEMFTKGFAKLSKPSAE VPLQPLRLEFHLDVIETNNYYPELSTIGLSLKIGLEGTKPKTYIVKNIGDFLQAYEKEMT FMVNKQHQFTLLHDSFSMEIQEILTELAAIYHTSQLLGANGIQVKGKIDKRYLLLPIDRS QSLVEKMNRTGQFILINQTHKYRYLTFKETSLPLTFTVQKTEEQSFKLTIQNPITTFLAH YHWAIADQTVYLLTEEQEAIYTTLLQLMKRLEEPSIIYEKETVSDLFSEVLPLLEKIGRV SVEESVEELVVHHPLKAVFIFKKIKGRINARIDYHYGEVIFSTNPKYAQLPEVNQEIVRD KAKETAIKQQFQQFSYQQTTTGFEKVLPAGESLYYFFKAEVPAFRQLGEVRMGRKLRELY LDAQHHQPTIEVAEGDSWLDIRFDVTGIDETEIDAVLTSLLRNDAFYTLKSGEILAFDSE EFFHTSAILTKLRKNMHQEDNVIHVPKNQGLMIESLLEDNERAHFSDSFKKMVTDLTHPE NFEAQVPKTLQATLRHYQETGYKWLKMLSHYQFGGILADEMGLGKTLQTITYLLSEKEEE RLKGTALIVAPASLTYNWLAEVKRFAPTLNVQVVSGNRQERAALLQNSTEDILITSYASM RQDVQLYQEMRVGYLILDEAQMVKNSGTKTAQALKSLKVPQRFALSGTPIENNLDELWSI FQMILPGLFPGKKAFREIKPEEIAKMIQPFILRRDKKTVLADLPEKIENNMYSVLTEEQK TVYLAYLKQMQADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYTGGSGKVEQV KDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDRLTMANAFNEG EKDVFLISLKAGGTGLNLTGADTVILYDLWWNPAVEEQAAGRAHRMGQKKVVEVWRMIAE GTVEEKMNSLQQEKRELFQKVIQGNEEQLAKMTEEDIRTILSIGE >gi|237663595|gb|GG668923.1| GENE 135 131555 - 132268 520 237 aa, chain - ## HITS:1 COG:SPy0596 KEGG:ns NR:ns ## COG: SPy0596 COG1011 # Protein_GI_number: 15674680 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Streptococcus pyogenes M1 GAS # 4 237 5 238 300 273 55.0 2e-73 MRTIVFDVDDTLYDQQQPFRNAMTKIFPNVATEDMHELYLRFRHHSDETFPKVLANEWSL DFMRFFRMNETLKDLNYPGISQEEGKIFQQVYEEELDNITMHPEVTKLLDTLQEKEIPMG IITNGPTDHQFKKVKQLNLEKWVPSQNIIISQSTGFQKPEKEIFDLACNQFCMEPEHTLY VGDSYDNDIVGARNGGWHSLWFNHRSRELPSCQPASHLAEVTCFTELCPTVEKLFNL >gi|237663595|gb|GG668923.1| GENE 136 132444 - 132530 107 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKYSDNEKFVKMILSQSYLNNMRSDRS >gi|237663595|gb|GG668923.1| GENE 137 132596 - 132964 408 122 aa, chain + ## HITS:1 COG:BH3891 KEGG:ns NR:ns ## COG: BH3891 COG1132 # Protein_GI_number: 15616453 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Bacillus halodurans # 1 120 1 120 577 159 57.0 1e-39 MLKRFFGYYRPYRRLFILDFGCAVFAGLLELAFPVAVNQVIDKIMPKGDFRLIALASAGL FAFYIINTFLQFIVVYFGHMLGVNIETDMREELYQHLQTQPFEYYDNQKTGKLMSRLTTD PS >gi|237663595|gb|GG668923.1| GENE 138 133039 - 134451 862 470 aa, chain - ## HITS:1 COG:SPy0655 KEGG:ns NR:ns ## COG: SPy0655 COG1961 # Protein_GI_number: 15674723 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Streptococcus pyogenes M1 GAS # 9 468 2 469 471 259 36.0 7e-69 MKGESELDKKAAIYIRVSTQEQATEGYSIQAQTDRLTKYVEAKDFILYKKYIDAGYSASK LERPAMQELIQDVQSKKVDVVIVYKLDRLSRSQKDTMYLIEDIFRPNDVELISMQESFDT STAFGSATVGMLSVFAQLERKSISERMITGRVERAKKGFYHTGGQDRPPAGYQFNSDNQL VINEYEAAAIKDLFRLYNDGLGKSSISEYLKKNYPGKNKWLPSSIHRMLKNSLYIGKVKF SGAEYDGIHEPIIDEVTFYKTQKEIARRKQTNTKRYNYVALLGGLCECGICGAKMANRRS VGRKGKVYRYYRCYSKKGSPIHMMKIDGCPSKAQQQFIIDEAVINNLKNIDVEAELKKRS APQTNTSLISSQIESIDKQINKLIDLFQVDSMPLDVISEKIDKLNKEKQSMEKLLERKNK LDKTELQHRFAILKSFDWDNSSIESKRAVIEMLVQKVIIHDNSIEIILVE >gi|237663595|gb|GG668923.1| GENE 139 134510 - 134821 163 103 aa, chain - ## HITS:1 COG:no KEGG:SPs0878 NR:ns ## KEGG: SPs0878 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_SSI1 # Pathway: not_defined # 1 89 1 89 101 70 33.0 3e-11 MDVKKEILNVNCPHCGKKIKLSFNSIACPYCYGEFIPDEVHKLFYQYEAHLINSKSYNAT KKMEKTSDALINTGKGLSNLGCALTLLPLAILGLIIAWSILTN >gi|237663595|gb|GG668923.1| GENE 140 134909 - 135373 395 154 aa, chain - ## HITS:1 COG:no KEGG:EF1276 NR:ns ## KEGG: EF1276 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 143 1 145 157 113 44.0 3e-24 MNNYEMLVNALSEEVPIKEVPLYEQTKDTAYFYKGTIFIEKSLSTVEKRERLYEEYGHCK TSVGNILSQNVLENRKQEKKARAYGMAQAISLDDLIDAWNVGCKYYWECAEFLGFTTQYV IDSVQNIKEMYGINFTYKNFEFRFITESCIEIIE >gi|237663595|gb|GG668923.1| GENE 141 135391 - 135834 322 147 aa, chain - ## HITS:1 COG:SPy0939_1 KEGG:ns NR:ns ## COG: SPy0939_1 COG1396 # Protein_GI_number: 15674958 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 5 98 11 116 144 59 36.0 2e-09 MGERIKRLRLEKNLTQEELASKFGLKRAAINKYEKGNVENMKRSVIEDMSKFFGVSPSYL MALDDSTSSIEEVFNKLDPSRQEKVFNYAKAQLNEQTSEKITMLHHKKEDSDEEIIDLAA HSEIDGRVYTDEEIRSIRDHLDQFLND >gi|237663595|gb|GG668923.1| GENE 142 136005 - 136223 325 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519527|ref|ZP_03949576.1| ## NR: gi|227519527|ref|ZP_03949576.1| hypothetical protein HMPREF0348_2510 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] conserved hypothetical protein [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2510 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] conserved hypothetical protein [Enterococcus faecalis TX0635] conserved hypothetical protein [Enterococcus faecalis TX0630] # 1 72 18 89 89 117 100.0 4e-25 MNKKGLRILLISNDENQGSLADYLGISEQTLSKKINEKDGSEFSQTEIKLIKEKYGLSAE EIDHIFFNSLVS >gi|237663595|gb|GG668923.1| GENE 143 136254 - 136412 214 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315162229|gb|EFU06246.1| ## NR: gi|315162229|gb|EFU06246.1| conserved domain protein [Enterococcus faecalis TX0645] # 1 51 1 51 100 81 96.0 2e-14 MNKPEIKVDVSIEGIDEATKKAERYVEVLKEAKTLAGELASMHFEISVNEKE >gi|237663595|gb|GG668923.1| GENE 144 136447 - 136590 144 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDYIEKLELVIYIFVFLLIPLVLTIVFKEPLIIAGVAILVSIFDFLD >gi|237663595|gb|GG668923.1| GENE 145 136556 - 137158 389 200 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227519530|ref|ZP_03949579.1| ## NR: gi|227519530|ref|ZP_03949579.1| hypothetical protein HMPREF0348_2513 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00279 [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2513 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00279 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9511_00166 [Enterococcus faecalis TX0630] # 1 200 1 200 200 372 100.0 1e-101 MKELLLKDFITIGISSIALLISLINLYRDRKNISVRITNQTLIKRIETYDKEPAFPNQSA GVSIGFRFLNTSKHSIGYYDLVFKDGYTNQLLPCTYKFALRPEIASQELLGITPLDETTH LNFMDSNYGVIPANSYVLKEVVVYPISNKIRVNIKFAKSTIIPNFRSETTKFKKWKSTLI KLTDEEINAINQENQKLIQE >gi|237663595|gb|GG668923.1| GENE 146 137232 - 137402 294 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257081758|ref|ZP_05576119.1| ## NR: gi|257081758|ref|ZP_05576119.1| predicted protein [Enterococcus faecalis E1Sol] predicted protein [Enterococcus faecalis E1Sol] hypothetical protein HMPREF9513_01332 [Enterococcus faecalis TX0645] # 1 56 9 64 64 93 98.0 4e-18 MAKKQEPLKVIIRNADGTICEDISKKEWSPERRQMIAEAMGDAILEQQGLLDKLRN >gi|237663595|gb|GG668923.1| GENE 147 137527 - 138060 230 177 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227519533|ref|ZP_03949582.1| ## NR: gi|227519533|ref|ZP_03949582.1| hypothetical protein HMPREF0348_2516 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9515_02808 [Enterococcus faecalis TX0860] hypothetical protein HMPREF0348_2516 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9515_02808 [Enterococcus faecalis TX0860] hypothetical protein HMPREF9511_00169 [Enterococcus faecalis TX0630] # 1 177 6 182 182 315 100.0 1e-84 MNNELFSGVLIALIGFLGAIFGGKYSAKTEKQVTSRIIFEKAYSEIFLLIENDFYNKKLT DEQITDLGLEINEILEKADGYYYPSLKQYAQWMFDPEYTQNLQELWHSFCWTFDRQYEKV CSDIGLPTRSRYYRINKRQYSGVMHFFKIYFFSRYAWADILLIALLVLLITLFKITN >gi|237663595|gb|GG668923.1| GENE 148 138214 - 138348 223 44 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519534|ref|ZP_03949583.1| ## NR: gi|227519534|ref|ZP_03949583.1| hypothetical protein HMPREF0348_2517 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] predicted protein [Enterococcus faecalis CH188] conserved domain protein [Enterococcus faecalis TX0860] conserved domain protein [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2517 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] predicted protein [Enterococcus faecalis CH188] conserved domain protein [Enterococcus faecalis TX0860] conserved domain protein [Enterococcus faecalis TX0635] conserved domain protein [Enterococcus faecalis TX0630] # 1 44 18 61 61 70 100.0 4e-11 MSKENVQKKYHESLKERGITDIEAELIGRLYGVKLLDAEKKHDG >gi|237663595|gb|GG668923.1| GENE 149 138492 - 138653 262 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519535|ref|ZP_03949584.1| ## NR: gi|227519535|ref|ZP_03949584.1| hypothetical protein HMPREF0348_2518 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00274 [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2518 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00274 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9511_00171 [Enterococcus faecalis TX0630] # 1 53 1 53 53 80 100.0 3e-14 MKSKIKQSLPDLIMLATVIYLTNLDLKAGVAMAVAMFLTTIFGTKNSYIKKGD >gi|237663595|gb|GG668923.1| GENE 150 138658 - 138972 309 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519536|ref|ZP_03949585.1| ## NR: gi|227519536|ref|ZP_03949585.1| hypothetical protein HMPREF0348_2519 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00273 [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2519 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00273 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9511_00172 [Enterococcus faecalis TX0630] # 1 104 1 104 104 181 100.0 1e-44 MNKKIEALLQGLQDECNKAELPMVCGIIDKNNDAQATLVGGALIDQSIILSILTELFLNS VKNGTCNCSNCEDLREAFGFKQKTSESDSNIDDLLQTFLRGELD >gi|237663595|gb|GG668923.1| GENE 151 138969 - 139196 261 75 aa, chain + ## HITS:1 COG:no KEGG:EF2843 NR:ns ## KEGG: EF2843 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 75 1 74 74 74 56.0 1e-12 MIEVRGLGDSIYDAMLANAQNNAVKNIMAAASNGKTSVTVNSKGLTQPFLDSLEEEGVKA TEKNNANEILFFWEW >gi|237663595|gb|GG668923.1| GENE 152 139199 - 139468 208 89 aa, chain + ## HITS:1 COG:no KEGG:CTC01073 NR:ns ## KEGG: CTC01073 # Name: not_defined # Def: hypothetical protein # Organism: C.tetani # Pathway: not_defined # 1 59 65 123 149 75 57.0 9e-13 MATNYDRYGRMSYSPELHKNQGKVWTYEEVEYLKNWYAIIGPEEMSLALERTPASVMTKA SSIGLKTKNYSKRLGGRQKKTNSSANELV >gi|237663595|gb|GG668923.1| GENE 153 139546 - 139983 395 145 aa, chain + ## HITS:1 COG:no KEGG:SPH_0086 NR:ns ## KEGG: SPH_0086 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 2 142 4 140 144 100 43.0 3e-20 MKNINLNLSEISEGAVQEKFEHEMQQVFENILDLNTDPIKKRTITLTIEVSSDKDRELVI LACKSKSKLVPRDENETKVLFGRNAETGYIEANELKSGTRGQMYMDPEDLKVKTDTGESV EDIEKEQKESATKQEVIDFRKKVTN >gi|237663595|gb|GG668923.1| GENE 154 140003 - 140755 707 250 aa, chain + ## HITS:1 COG:no KEGG:SPH_0087 NR:ns ## KEGG: SPH_0087 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 2 250 3 245 245 182 42.0 1e-44 MTENIKEAIKYGVELSEGQAVIYKEEDRIFYDSNKASLRELFPAKYAETLTVNSLTGLVQ YLLSKFDQETTDDPDELLVHVESPTSVKVYGRLNELDRKRESLIKATAILDKFNYGYFMN TEEFIINLQSLFDRTDDSEAILKFASAVRIDNGATINDNGVSQTATVKTGASTVGEGKVP SPANLQPYRTFLEVPQPESQFIFRINERGNCALFEADGGLWKYHAMESIKSFLEDALKEL IEENKLTVIA >gi|237663595|gb|GG668923.1| GENE 155 140983 - 141798 302 271 aa, chain + ## HITS:1 COG:no KEGG:CLL_A2281 NR:ns ## KEGG: CLL_A2281 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 34 268 65 281 281 84 29.0 7e-15 MFVRENKYAAGDYQEVDVVPLPDEVKEKLSNTSRKRKENMTRPQQQLTNDKRSYKWMRLA MNGNFFKGDYYLTLTYDEGDIPPPEKAEEAKKDLSNFLRKVRNLYKKVDKELKYIWVMEY ELDQEGNYLKRVHFHLVMNQGVNRDAIEECWSQGRGKNKKLLGYVNIRKIKPNGDFGLER LSGYFSKGKRWKKGKKVWNCSRNLSRPQKLHPNDSKYSSRSIEKLFLSNDKGYEVLQKKY PNFYITSIEFVNNERKGMHMYLKMWKKERAG >gi|237663595|gb|GG668923.1| GENE 156 141795 - 142115 235 106 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519542|ref|ZP_03949591.1| ## NR: gi|227519542|ref|ZP_03949591.1| hypothetical protein HMPREF0348_2525 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00267 [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2525 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00267 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9511_00178 [Enterococcus faecalis TX0630] # 1 106 1 106 106 174 100.0 1e-42 MKARYLVVCLGLLDLTHEIYLTVKKLSKKNDISEIKVQGQYISVSSYMYEFKTAEQLRSQ QNYERYMHVRCTEKFKEFANYETKNHYEEAIKAAKKNRGGKTLDEL >gi|237663595|gb|GG668923.1| GENE 157 142105 - 142617 343 170 aa, chain + ## HITS:1 COG:no KEGG:ELI_3127 NR:ns ## KEGG: ELI_3127 # Name: not_defined # Def: prophage LambdaCh01 # Organism: E.limosum # Pathway: not_defined # 5 164 38 197 198 105 36.0 5e-22 MNYDRSFKSKMNNDQGQLFEKMILLGCDHYKKKGLAVVEKTPEPFSVKKKMANGAFIGQF HKSKKAQPDFQGTLAGGRSIIFEAKTTQEDRIKQSVVSTAQSDYLRMHTELGACTGVCVQ VRKTYAFVPFSIWDDMKILYGRKYMTEEELKEYEIATFGFIGFLDYVGEV >gi|237663595|gb|GG668923.1| GENE 158 142620 - 142874 255 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519544|ref|ZP_03949593.1| ## NR: gi|227519544|ref|ZP_03949593.1| hypothetical protein HMPREF0348_2527 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00265 [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2527 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00265 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9513_01320 [Enterococcus faecalis TX0645] hypothetical protein HMPREF9507_02571 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9511_00180 [Enterococcus faecalis TX0630] hypothetical protein HMPREF9506_02691 [Enterococcus faecalis TX0309A] # 1 84 1 84 84 151 100.0 1e-35 MLTEESIKIMLDGFFRKYEIIFEYAIPINEGGKRVMLISGIGAKGRFEMKMGEDCVLWCK TLKGEWRSIDEYRFVGNEESEEEQ >gi|237663595|gb|GG668923.1| GENE 159 142871 - 143326 254 151 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519545|ref|ZP_03949594.1| ## NR: gi|227519545|ref|ZP_03949594.1| hypothetical protein HMPREF0348_2528 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00264 [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2528 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00264 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9511_00181 [Enterococcus faecalis TX0630] # 1 151 1 151 151 290 100.0 2e-77 MTVAIRKKRAMDIGEYRGQKIHHLTCLGEDKEKKMHWIVRCDCGVVRSIPRSKFGVIKTC GCQKFGGEKKKEFIYHGGLNELKPKKAALSKELFYKFNVSGCEMPVEGILIQEYTNSATM YVTETFTKADRVFVRQQGRRFVVRKKDLFVK >gi|237663595|gb|GG668923.1| GENE 160 143346 - 143651 557 101 aa, chain + ## HITS:1 COG:no KEGG:SH1788 NR:ns ## KEGG: SH1788 # Name: not_defined # Def: hypothetical protein # Organism: S.haemolyticus # Pathway: not_defined # 1 99 4 102 104 107 59.0 2e-22 MDELVKNVEAWAREKNLDIAESSKQFLKVSEEVGEVAAALARDNKDDLRDGIGDVMVTLI ILAMQNDMDLYECLNQAYNEIKDRKGKNVNGVFVKESDLNS >gi|237663595|gb|GG668923.1| GENE 161 143741 - 144394 324 217 aa, chain + ## HITS:1 COG:SPy0676 KEGG:ns NR:ns ## COG: SPy0676 COG0286 # Protein_GI_number: 15674741 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Streptococcus pyogenes M1 GAS # 3 211 2 208 211 235 51.0 6e-62 MKLTTEKINELLGVDDAYKAPEALMNILLNRDKREIVFNKFLEIEKDLTFDWFHEYFQDE HADRKVKKQDFTPNSIGEVIAKIVGPGSGLTHEVASGTGGMIIQKWRADRLSIGFFEYKP SMTFYDLEELSDRTIPFLIFNLAIRGMNATVVHGDSLDRKIKQIYFLQNSKDDSLAFSDV NVMPHSDVVTREFQVREWLEEAIDHIESPSVLGGENE >gi|237663595|gb|GG668923.1| GENE 162 144391 - 145335 555 314 aa, chain + ## HITS:1 COG:lin2409 KEGG:ns NR:ns ## COG: lin2409 COG0582 # Protein_GI_number: 16801471 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Listeria innocua # 1 314 1 314 314 377 58.0 1e-104 MSKRPRLFAGYFLEWIETYKVGAIRDISVSKYYIAHKHLTEICPDLTIDKLDRKAYQSIL NEYALTHERQTTMDFHHQIGSCVRDMYHEGLIKRDPTYKAIIKGIPPRPKKKKFLQKGEL QKLLKSLELGEGINMDWFILLVAKTGMRFAEAIALTPADFDWTRNTVSINKTLNYKNSTM FFQDTKNKSSVRTISIDWQIVGQFKPLIENLPQDELIFVNRDEKTGKYKRIFNSTYNSHL IRKCKESGITVITMHGLRHTHASILLADGVSTHSIAKRLGHSSVTTTQETYMHIIDELQS KDDEKILGALMQLS >gi|237663595|gb|GG668923.1| GENE 163 145567 - 145920 188 117 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519549|ref|ZP_03949598.1| ## NR: gi|227519549|ref|ZP_03949598.1| possible gp44 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] conserved hypothetical protein [Enterococcus faecalis TX0635] possible gp44 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] conserved hypothetical protein [Enterococcus faecalis TX0635] conserved hypothetical protein [Enterococcus faecalis TX0630] # 1 117 74 190 190 196 100.0 6e-49 MKNKYIADRLNRTVGAVEFRAKKLGLTKHKKIKELDTEIRRLIDEDYYLSQICTKLNIKM SSLIAHCQREKIPYKKMPRTEYKNYGKHVWNVQDKVRFQEYLSKQELKASEEDDSKV >gi|237663595|gb|GG668923.1| GENE 164 146037 - 146567 377 176 aa, chain + ## HITS:1 COG:no KEGG:EF2828 NR:ns ## KEGG: EF2828 # Name: not_defined # Def: ArpU family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 156 1 155 155 134 47.0 1e-30 MSLFDVSKYEVPNDEDVDLVLTRKNFEIFIRAYKNSREKAGQPRVPKVTQSFSLIPPSTA NGGVGEAERMLIQRENDITEFQELHELFVKGFIAISHPFRSEVTERRRQIFILRYLQGFT VSEILEMIHVSKDIVTDESKEAMLQFSNEIKLVVEKSESTPLLSAKNRKSSGANSV >gi|237663595|gb|GG668923.1| GENE 165 146614 - 146679 93 21 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHASLLSSVCLCCLSAAYIKI >gi|237663595|gb|GG668923.1| GENE 166 147062 - 147250 155 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519551|ref|ZP_03949600.1| ## NR: gi|227519551|ref|ZP_03949600.1| hypothetical protein HMPREF0348_2534 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9515_02830 [Enterococcus faecalis TX0860] hypothetical protein HMPREF9512_00257 [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2534 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9515_02830 [Enterococcus faecalis TX0860] hypothetical protein HMPREF9512_00257 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9511_00188 [Enterococcus faecalis TX0630] # 1 62 1 62 62 110 100.0 4e-23 MIAKKRLVLDGVVYCLPGMQCELIKQSKKYHTFRRIEKNKSIEFKVEKDLVSAFFKEGCS YE >gi|237663595|gb|GG668923.1| GENE 167 147243 - 147557 369 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519552|ref|ZP_03949601.1| ## NR: gi|227519552|ref|ZP_03949601.1| hypothetical protein HMPREF0348_2535 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] conserved domain protein [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2535 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] conserved domain protein [Enterococcus faecalis TX0635] conserved domain protein [Enterococcus faecalis TX0630] # 1 104 1 104 104 158 100.0 2e-37 MSKKEQIKKQQAQFLEIMKKVREEKDIDALAELFIEIISVYGLKMDETSALLYYVQKETL EADHNAQFLKERLKLDVKSLGIEGVLQVQRALVNTYLSNISNND >gi|237663595|gb|GG668923.1| GENE 168 147870 - 148577 463 235 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519554|ref|ZP_03949603.1| ## NR: gi|227519554|ref|ZP_03949603.1| hypothetical protein HMPREF0348_2537 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00254 [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2537 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00254 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9511_00191 [Enterococcus faecalis TX0630] # 1 235 7 241 241 461 99.0 1e-128 MKDYVEDGRYTIVVAPSMKSLMIKIKELYPTAVVTTSDADGIGGKKLLVDKWAADGLGLK AALPKYRTQDVVYENFTKQFVEGGNVTVNFSSKLHEGWEKAFNQIKQTTSESLRSSFIGY VAGIHAHPYKEQGDEDYMDYGKQSFEGNVWKQKRQDILDSNKPLTKEDVSFYLNGKVPKL YIKGQEVGVASMTAHYVTDSDMPGTNVITFVYMTKDDPRNKVLSIDLNNGRVFNQ >gi|237663595|gb|GG668923.1| GENE 169 148574 - 148840 239 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519555|ref|ZP_03949604.1| ## NR: gi|227519555|ref|ZP_03949604.1| hypothetical protein HMPREF0348_2538 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00253 [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2538 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00253 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9511_00192 [Enterococcus faecalis TX0630] # 1 88 1 88 88 154 100.0 2e-36 MSNDERTFIKEGSAIRNINESSHDASAWIQDTIDKLNSFKQRVDDGHVIIMGGDYNETHP APDREQVTYDYISLSIDFVEIKSQNMTE >gi|237663595|gb|GG668923.1| GENE 170 148911 - 148988 81 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDGVNFANATRFMSPSPLGPSFNKN >gi|237663595|gb|GG668923.1| GENE 171 149058 - 149549 340 163 aa, chain + ## HITS:1 COG:no KEGG:Sca_0492 NR:ns ## KEGG: Sca_0492 # Name: not_defined # Def: hypothetical protein # Organism: S.carnosus # Pathway: not_defined # 50 149 2 101 115 105 56.0 9e-22 MTQVDVATKSGISSKYYGSIENGKNSPSIEKLSAIAKALGCSLHYLLNDRMEDTENRVAV ETKRLQEIFNKIPRDKLSLVEGLIIQAARLRVLLDDNWKDIIENGEYEKFRQSENQIAYD RKRPIVENYDTRDKTYQAIIKQLTDLLPQNAKLDKKSKLLGRK >gi|237663595|gb|GG668923.1| GENE 172 149552 - 151243 1227 563 aa, chain + ## HITS:1 COG:SA1777 KEGG:ns NR:ns ## COG: SA1777 COG4626 # Protein_GI_number: 15927542 # Func_class: R General function prediction only # Function: Phage terminase-like protein, large subunit # Organism: Staphylococcus aureus N315 # 1 563 1 553 553 464 44.0 1e-130 MLFNKYVDQYIRKWKSGELILNEKRIQLLKLIEKEILPRDDIYYFDEEQINNYIEFSQAW YFDLDEWEKFISAFIFLFYKEEDEVVFDEFVINMGRGGGKNGFISTLANYFVSSLHGIDY YDVSIVANSEKQAKRSFQECYRVINKKGNEDLKEEFEAYKSSLTGLETQSVFEYKTSNAS SQDGGREGAVIYDEYHEMENTDIVDVFSGGLGKVDHGRQFFIGTKGFVREGYFDIKYREC EDILNGLTEFKGVFPYICELDDIEEMDNPECWAKANPALQPPLNKRGKRLFNEVMKKYKK LSTEPSGRAAFVTKRMNFLEDNMENSVATKEEIMATNRPFFELDTVPIGAIDFGSVRDFA TPGLLFKNRKKDEYAFKTFTFAMKHFCDVHYGYSLKEELVGTEKRAPIKTWEKMGLMKVI DEPSLNPKHIVDWFIEAREEYGVRIIVMDNYKADILGPMLEKEGFEVIRLKRPSNLHPLL APRVEDGFANHKFIFGDNPLMRWFTNNVYVKETQIGKQFLKKEEVKRKTDGFQAFVHALY KATELDDQIDYDNAFDILSELDF >gi|237663595|gb|GG668923.1| GENE 173 151254 - 151421 187 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519558|ref|ZP_03949607.1| ## NR: gi|227519558|ref|ZP_03949607.1| hypothetical protein HMPREF0348_2541 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00250 [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2541 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00250 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9511_00196 [Enterococcus faecalis TX0630] # 1 55 1 55 55 89 100.0 1e-16 MYKPQYLNIVRTTKSAYGNNIAYFKKTIVTHYGYKWGAPVKKENKSGRHFLGKIK >gi|237663595|gb|GG668923.1| GENE 174 151436 - 151618 200 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519559|ref|ZP_03949608.1| ## NR: gi|227519559|ref|ZP_03949608.1| hypothetical protein HMPREF0348_2542 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00249 [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2542 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis CH188] hypothetical protein HMPREF9512_00249 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9511_00197 [Enterococcus faecalis TX0630] # 1 60 1 60 60 82 100.0 9e-15 MENKAIEINVKRKLRYYFLEASVYFKIYVLRKEDTKVIQSAGKKIERNFDKYFKYSFSNI >gi|237663595|gb|GG668923.1| GENE 175 151652 - 152815 849 387 aa, chain + ## HITS:1 COG:no KEGG:JDM1_0502 NR:ns ## KEGG: JDM1_0502 # Name: not_defined # Def: phage portal protein, HK97 family # Organism: L.plantarum_JDM1 # Pathway: not_defined # 2 387 6 380 380 275 42.0 2e-72 MSLFDVFKLSVKKEEPSDWLPDFVAGDELATRSYLKIMAKNTVIDFVSRTMSTLEIKFKN TGMEDWDYILNVRPNSDMSATTFWQTFFFRLLDENEVLVILKDDQLLIADDYTREQKTIT DDCFSNVYVKEKVFAEKFYMSDVIYLKYNSKELDSFTKGLFNDYSELFGRILEISMRNNQ IRGSVSIEATGAMNEEKGKDGKTRSERLQEYVNKIYHAFSTKAVAIVPKVKGFDYEEYTN KQGSSNQSLEELNKMKSSLIDDVANAIGVPTALIYGEKSELDSNIKAFRKLCIIPLMKKL QDELTAKILTRQEYKNGKRIKVTKVLPVSILENATQIDKIVSSGTFLRDEVREETDYDAL PDGEGKKLIMTKNYAHVKGGEEENDKD >gi|237663595|gb|GG668923.1| GENE 176 152802 - 153521 631 239 aa, chain + ## HITS:1 COG:ECs2960_1 KEGG:ns NR:ns ## COG: ECs2960_1 COG0740 # Protein_GI_number: 15832214 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Escherichia coli O157:H7 # 39 187 94 244 244 108 37.0 8e-24 MTKTRNVPFQFSNELVEGKRVLTLSGNIRKKYWSDDDVIDAKSIRETLDGVTDDITIKLN SPGGDVFEGVEIYNYLKDHPSKVTVEVTGVAASAATFILSAADEAIMNVGTSVMIHEAST FTWGNKQDIQKTLNALETIDDSILSIYSQKTGQTTDQLETWMREEKWFTAEEAVEYGFAT EVKKNTEKNSTDSKENIAEMVKNAVAEAMSLNQQAVTNEAKQKSKPKQKSLINRLTKGA >gi|237663595|gb|GG668923.1| GENE 177 153524 - 154705 1289 393 aa, chain + ## HITS:1 COG:no KEGG:BcerKBAB4_3589 NR:ns ## KEGG: BcerKBAB4_3589 # Name: not_defined # Def: hypothetical protein # Organism: B.weihenstephanensis # Pathway: not_defined # 7 393 6 383 383 244 36.0 3e-63 MTLTLKNKTDEAKKQFNAVSTNEEATPEQVSAALEAYVTAVAEDAGKQVRAEYEELKDVT DNRVLEARGIHTLTNEETKFYNEVEKAGGFNEDLVWPETILERVFEGLQEERPLLKIINF TPSVGKTKITRSRRKGVAVWGPLHKDIEGKLDAQFGATEFNQLALTAFFLISNDTLELGP RWVDRYVRLCLSEAIAEAWEKAIINGSGHNQPIGLTKDMNAAIDPTNGYADKESAGILTF KDSQTMVKEFAMLLKKASKYTDKVGDGDEGEEKPRKVKGNVYLIVNPLNYYDIVARVTTQ NANGVFVSNLPFISEDHIIESLEVKENKLIAFVGGEYDATQSRAEKVYVYKETFAMKRAT LYAADLLGNGEPANNDAAQIYDIKIDDGEPATK >gi|237663595|gb|GG668923.1| GENE 178 154782 - 155063 168 93 aa, chain + ## HITS:1 COG:no KEGG:Sca_0497 NR:ns ## KEGG: Sca_0497 # Name: not_defined # Def: hypothetical protein # Organism: S.carnosus # Pathway: not_defined # 1 90 1 92 98 70 46.0 2e-11 MESYLKEFKERNQIFHSSDDDSIKEQLNDSFEDIRTLIGDFDPKVYRKGKELVFERTRYV RNEALEYFYPNFQQSIMDASIDISGGEGFGNTP >gi|237663595|gb|GG668923.1| GENE 179 155047 - 155424 320 125 aa, chain + ## HITS:1 COG:no KEGG:LMHCC_1370 NR:ns ## KEGG: LMHCC_1370 # Name: not_defined # Def: gp8 # Organism: L.monocytogenes_HCC23 # Pathway: not_defined # 7 125 5 121 121 128 52.0 8e-29 MAIHPNYKRPKIGAGELKTPVSFFQFIPREGPEPGEIVKKELHSCKAQIYNPSMKDMEIL NAKGTKEGLTIKIRDPHQDYIPSNKHKVVINDYRALPVGKEWEIVDVSPDFEDNRFIKIV LGITS >gi|237663595|gb|GG668923.1| GENE 180 155421 - 155813 369 130 aa, chain + ## HITS:1 COG:no KEGG:JDM1_0507 NR:ns ## KEGG: JDM1_0507 # Name: not_defined # Def: gp9 protein # Organism: L.plantarum_JDM1 # Pathway: not_defined # 1 128 1 134 135 81 37.0 1e-14 MSEVTGLEEILKNMEDKLGQARVNRISNKALKKQGERNKQTVKKYMASYIDSGKTHDLVI SSGVKSNPKRVETGWASKERAPIVHLNEFGYTRYGTYVRPRGMGKLQAAADEIQAKAFGE MKSDMEELAK >gi|237663595|gb|GG668923.1| GENE 181 155810 - 156205 288 131 aa, chain + ## HITS:1 COG:no KEGG:JDM1_0508 NR:ns ## KEGG: JDM1_0508 # Name: not_defined # Def: GP10 protein # Organism: L.plantarum_JDM1 # Pathway: not_defined # 2 131 5 140 140 99 39.0 6e-20 MKDMMMEVYNALIENETINELVTPQRIKFYEVPETLDTTKPFIVIDNFLGPQTNAYFANN KALSIRFNYQINVESMDRMTTKQISKAVEETMKQIGFGRLDGGLDQYFNETKRFVDARRY RKNTQIHDTDY >gi|237663595|gb|GG668923.1| GENE 182 156238 - 156831 848 197 aa, chain + ## HITS:1 COG:no KEGG:spyM18_0379 NR:ns ## KEGG: spyM18_0379 # Name: not_defined # Def: putative major tail protein # Organism: S.pyogenes_M18 # Pathway: not_defined # 1 179 1 175 194 96 33.0 6e-19 MQTYGFSRITIQQLDNELKPVAGKKHVIDGKPKEGAAASFEITGLTKEPSKVFGSNIAYY VARKGHGDIAANLGILDVPSAIEHEMLGHKKASEESKVYHIGEDTEPPYYAVLIESEDLY GEKLGFGMYAGTFSLDGVKGETLNDDDFTPEPGEYVYSAVSRQINGKKVTVGFADNSEAL AELTTELFGEETPAPEK >gi|237663595|gb|GG668923.1| GENE 183 156905 - 157378 711 157 aa, chain + ## HITS:1 COG:CAC2367 KEGG:ns NR:ns ## COG: CAC2367 COG5492 # Protein_GI_number: 15895634 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Clostridium acetobutylicum # 14 157 175 321 752 75 38.0 4e-14 MSFIPPEKFRLYKKGETNPVAAGVSPLAITGIAANTDVLAGDYTVTGVATVNGEEKESDH VDVPAFKTLPIAVTGITLDKTELALKVGETATLTPTITPENATNKAYRFSSEDAAIGTVT PVQGKVTAVSEGVTKIVGTTEDGNFTAECTLTVSAAE >gi|237663595|gb|GG668923.1| GENE 184 157435 - 157782 471 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315573869|gb|EFU86060.1| ## NR: gi|315573869|gb|EFU86060.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] conserved hypothetical protein [Enterococcus faecalis TX0309A] # 1 115 1 115 115 174 99.0 2e-42 MERKIELTLRIDGEEKTFTQDFVPFSKRSDYIRLEKELEESAKKQGKEPIEEDYLDMQIQ FVADLFDEKEVTKESIMNGLDSLDIGKIWDIVRHRVLGFSKEDDEAAKKAMAEEI >gi|237663595|gb|GG668923.1| GENE 185 158004 - 162755 4613 1583 aa, chain + ## HITS:1 COG:lin2383 KEGG:ns NR:ns ## COG: lin2383 COG5283 # Protein_GI_number: 16801446 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Listeria innocua # 544 1265 404 1091 1601 199 25.0 5e-50 MSGGTPLGNMVIKLGLDSSDFGRGAANAKKEVRYLAKEMQANAKIADMAGNQMGKLGTRF DGLTKIIGAQEKQVAALKKAYDESFVDGKATESTKRLATQLQDANGKLANYRSQLIQTAG QMAEMQVKTTGATGAIYNASEKMISSGQKMEKVGGALTKGITLPILAGAAAVTTAAVKWE SDFAGVKKTNDEVVDSTGKVVYSYKDLENGLRGLAKELPSSHTEIANVAEAAGQLGIKTK NVVGFTKTMIDLGESTNMSAEEAATALARLANITGMPQTEFDKLGSVIVDLGNNFATTES EITAMGLRLAGAGHQVGMSEAQIMGFAAALSSVGIEAEAGGSAFSKVMVQMQLAVEKGTG AFSELEQIANGAGYTIGEVGQAVLNGGKPLKTMASNLGMNSKALSKMYKEADKSKTSLED FASVAGMSGEQFAKAFKEDASGAIIKFVEGLGKTKEHGQSAISVLDEMGITEVRLRDSLL RAAGASDVFKSAVDRGTKAWGQNTALTEEANKRYETTESQLKMLKNEAVDVGITFGGPLV KALRDVLQATKPMIKTVTNLAESFSNADPKTQQTIVKMIALTAAMGPAIKLTGTLTKGVG FLGKGFVETMAAMSKKRAIEDVTKAFAEGSSVSIGFGKDIASSGSALGGLTAKIGGTTTQ IGSLTKGFSLLNPWVLGATAAIGAGVAVWKLWGEEAWNSSQRVKQWGTDVGREVDKTLDG VQDKTKAANGQFGLLKDGFNQSDASKMAENFETAGQSLEKSLNKKVDGLNQLLKQLPGTA TDSMKEIIENEKKLNQSAVEEIQSNNKQIQEIRQRAANENRQLSVSEAQMISDLSKNTAE AYVNTLDVSAEQKRTILKSMTGDVANATKEEAEIWLKSLGEQRNASQTHAAKMKEEQKKW LKDWGYNLDGEFAQKYLEEWDKINETTTEGFDNQMAAIVEKFPELKDKIHLASGQVIKES GNASQYLIEDNEKLLENVSKTTNKVAENAKKNAEQLKYVGNEASEYGKMWNNLVLDPKTG EVKTNAQEAVNEAANSEKGWNQLLYASKHADLKSNAKLMIAEAAIANGKWDSMTFKEQQA LLDTNAKKTVTQALQANGKWDKLNFEEKKAILYSNTPEKMAENMLNLGLWEDYKLHDKEI KADNKEFLEVLSDSQEKIVNWSNIPDDVKEFYADNQDLLTKIYGSERAFNAWKNLPDESK LLLANNTDVLQKILSSETYLTNWNNLPTDQKKMLANNDDLLTKVMKSEESMNAWKSLPDP VKKMLGNNEDLKAKIADGTLSVQTYDQIKPQLKKLLGDASNVSNQSQVGIQNLNAFNANN PAQKILRGDSSNAQAAARQGGNALNTYNVNNPGTKNLRGNAGGVVSAASSGNSSLNIFAA NNPVEKLLRANDQASGPASQAKNAVSDFNSGPSVITKTLNVVANLGAGVAKILGLETGTN NHIGGPAIVNDQKGRTYKELVIPKGGVPFIPEGRNVFLPDLPKGSKVIKASETKKLIPHY ENGVGVPRNSSVVKNLIAIQDSHESNDFSELASLMREMVSYLKDGNIKNMEVTQYITGAD TKTPRETAMETKRQLRDLARGFK >gi|237663595|gb|GG668923.1| GENE 186 162755 - 163654 617 299 aa, chain + ## HITS:1 COG:no KEGG:EF0349 NR:ns ## KEGG: EF0349 # Name: not_defined # Def: tail protein, putative # Organism: E.faecalis # Pathway: not_defined # 4 299 3 291 291 196 37.0 8e-49 MKLELVYTNQNGEQLVFNEEAPYFLQNVEGLEAPENVVLAEEVFGEDGAKVVGIRLSTRK PLLEGTLIGKTEEEIYQLRRDMIQKIDLKQTGKLTLKVYDKEYETDVLPIQAPSFKLYED NPYKVDEWNLFSLQFEAFDSYFRDVSFYNSLVPLATLKPTLIFPMVFVQGEKHTFGRFES GNIEKIVNNGDVQVGAVFHMKCVTTVTDPQIYDVTKQTFFGFKGTFEPGTRFELSTVRGN LYAKKIVNGVETNAVPERMDGSSFFRLSKGDNYLQLKAANNSQNGITCEMQFTPLVSGV >gi|237663595|gb|GG668923.1| GENE 187 163657 - 164781 645 374 aa, chain + ## HITS:1 COG:no KEGG:EF0350 NR:ns ## KEGG: EF0350 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 9 372 3 361 361 278 42.0 3e-73 MDFMPLPFVEVFRRKSGFDYESTAVLDIWKSMSVKENFKSANTFETVVLLKYMPKELMNE DTVLLINNCFYYIDSIICDDLSSGLITISGKSLFAKVGKRIVYRIYNQTKRPELICYDHL RNEVVSPSDVKRKISYLSVEQPPAITNSNISYQNSYGNVEEEIEGLCESYNFGFDEIPIS NGRIGSTSNGQVGTNIRFRKSEDVSSVVQFSAEFENVTNESLEKNNYDEATTALIYGEGE GKARKHTQVNNNLSGLERKEIYVDARDLQQTVDDVKMPDAQYIATLQSRGKEKLTEQPRV LALNGTINLNDSLFVYGRDYKLGDRVKRISSFGYSDTVVLNSVTQTWDEKGYHIDGEFGN QSKTIIDVIKRKGK >gi|237663595|gb|GG668923.1| GENE 188 164792 - 165847 1167 351 aa, chain + ## HITS:1 COG:no KEGG:EF0351 NR:ns ## KEGG: EF0351 # Name: not_defined # Def: structural protein, putative # Organism: E.faecalis # Pathway: not_defined # 19 351 13 344 344 492 75.0 1e-137 MAELSLFYDAVLQDDGTYDRAYTSADWAKYFENIFRNGVMMSVGEALRVTAADSVGMRIV VKAGSANLKGYQYINTSAFAVPIDVASSTQDRTDSIVVRHDLNARQAYVAVKKGNVSVER STEVYEIQLATVKVPRNSSGITADLITDKRSDAKVCGYSTPFANVSVSGLEAQYEAMLKK IVETNKTSYEKILNDFKNYVAKAQTDMDYNIEEIIRTGNGKVNAFDVLIHEWFAALKNEL DANQASNLQNQINEMKATEELPAIEHNLRGYPNVQVLYWEYGIGLSGLANEPTGLGGSNV KKIPHSVEYLDLFSFKVKVPMNFKMVNPTVTKIDSRTIRFIEAFKVIEIKF >gi|237663595|gb|GG668923.1| GENE 189 165858 - 166649 507 263 aa, chain + ## HITS:1 COG:no KEGG:EF0352 NR:ns ## KEGG: EF0352 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 263 1 263 263 542 99.0 1e-153 MYTFKKGDADYQVMLNENFKEITDSFEDGLFVRKNSKILDLNDAILPGIYSIPATGVDNK PLPNSGSLFVCKDPGGVRQLFQTERTIFIRQLGGVPSSWTDWKKVAFEKEQPFEAWYSPG TNHAGFKNKARYNLGPEFSNIGQRLGLPMKSEPLEWNSGRWQAKVLRDCKLNISGTVKYH VGSSRGVLYAYTHIDKGLDEGVGDLGIGSAVGAVGGLNYQNVAAFDLNVTLKKGEYLAFR LELAADKQLDYTQLSSMHITELV >gi|237663595|gb|GG668923.1| GENE 190 166725 - 166979 368 84 aa, chain + ## HITS:1 COG:no KEGG:EF0353 NR:ns ## KEGG: EF0353 # Name: not_defined # Def: holin, putative # Organism: E.faecalis # Pathway: not_defined # 1 84 1 84 84 138 100.0 9e-32 MKDELIQDVVERLVRIETKLDNYEVLREKTEDAKEKADYAFSIAKNNEEDIKEIKENQKW SWRTIAGIGVSVVVYLFTKYLGGV >gi|237663595|gb|GG668923.1| GENE 191 166982 - 167188 360 68 aa, chain + ## HITS:1 COG:no KEGG:EF0354 NR:ns ## KEGG: EF0354 # Name: not_defined # Def: holin, putative # Organism: E.faecalis # Pathway: not_defined # 1 68 1 68 68 116 100.0 3e-25 MILPDKYYKIIKWGVLTVLPASSVLVATLGKAYGWQQTDMTVLTINAIATFLGVVTGVSA YNLKDKEK >gi|237663595|gb|GG668923.1| GENE 192 167191 - 167412 377 73 aa, chain + ## HITS:1 COG:no KEGG:EF0355 NR:ns ## KEGG: EF0355 # Name: not_defined # Def: endolysin, putative # Organism: E.faecalis # Pathway: not_defined # 1 73 1 73 433 142 100.0 5e-33 MKKKILAGALVALFFMPTAMFAAKGDQGVDWAIYQGEQGRFGYAHDKFAIAQIGGYNASG IYEQYTYKTQVAS >gi|237663595|gb|GG668923.1| GENE 193 167847 - 168011 163 54 aa, chain + ## HITS:1 COG:no KEGG:EF0355 NR:ns ## KEGG: EF0355 # Name: not_defined # Def: endolysin, putative # Organism: E.faecalis # Pathway: not_defined # 1 54 380 433 433 95 94.0 4e-19 MKVNGSATSNVYTVKYGDNLSSIAAKLGTNYQVLAALNGLANPNLIYPGQTLNY >gi|237663595|gb|GG668923.1| GENE 194 168267 - 168713 527 148 aa, chain + ## HITS:1 COG:L197116 KEGG:ns NR:ns ## COG: L197116 COG3600 # Protein_GI_number: 15673914 # Func_class: S Function unknown # Function: Uncharacterized phage-associated protein # Organism: Lactococcus lactis # 13 118 170 283 306 68 34.0 3e-12 MSDVKHVARYIIEQLGGMTTMKLQKLVYYCQAWSLAWDEKPLFEEEFQAWANGPVCYELF SEHRGKFKVDENFLQDYSDYKFEPDELETIGIVIEHYAEKSPHYLSELTHKERPWKETRG SLPLGESSTEIIPKELMQEYYAGISSAE >gi|237663595|gb|GG668923.1| GENE 195 168688 - 169152 181 154 aa, chain + ## HITS:1 COG:no KEGG:Selsp_2097 NR:ns ## KEGG: Selsp_2097 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 14 154 5 150 153 86 37.0 3e-16 MRGLAVRNNKGFAKKKEKKDKGKRVKETVNAESYKTKEPMWRFKRCDTFHEKWSVKNCCN INEEMLDKLISFEGLCWIDIERQTHDKGKSSNHFVDVSNLCKEAQGRLKELKIYDDELFS LRLSNKERLYGLLENGVFQILWYDKNHEIYPTAR >gi|237663595|gb|GG668923.1| GENE 196 169482 - 170249 465 255 aa, chain - ## HITS:1 COG:no KEGG:SaurJH9_1877 NR:ns ## KEGG: SaurJH9_1877 # Name: not_defined # Def: hypothetical protein # Organism: S.aureus_JH9 # Pathway: not_defined # 1 252 1 253 258 207 46.0 5e-52 MKDSKTFISDYVNWLKQEYSFNKLDQADEVITPFVNHINDRIRIYLQYMSNDKIRISDDG NTINELEMLGIDLNTKVRTKLIENVLNNFSVNLENDILFIDSDPSNFPTNKHKLIQTILR VYDLTMTQKKNIINLFNEEVQEFLFDHDFAGNVGAKYTGGSGIDYQIDYSLGPTKKRPEI FIQFINNFNFNSITTESFIYDDLKEARSSDKTKFSYKIIANDDEQKLSTKALTAARAKNI DVIPWSDKKTILSLK >gi|237663595|gb|GG668923.1| GENE 197 170278 - 170721 209 147 aa, chain - ## HITS:1 COG:no KEGG:LEGAS_0833 NR:ns ## KEGG: LEGAS_0833 # Name: not_defined # Def: hypothetical protein # Organism: L.gasicomitatum # Pathway: not_defined # 1 144 1 139 144 79 35.0 4e-14 MNQQEEFDMLFSCLKIIDEDKLNFPEVGSQNYHNLYKYQNKEEKFKLLINRKGHLNKQNL TYIMNSQRLKGLLVRLDMTGPPHIGIDGKKIDTPHVHIFDKNHNFGSIVEPLSRISNIII KNELRDSLEAFLVYNNVDLKNKNIPHL >gi|237663595|gb|GG668923.1| GENE 198 170848 - 171096 215 82 aa, chain - ## HITS:1 COG:no KEGG:EF1489 NR:ns ## KEGG: EF1489 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 82 1 82 82 125 92.0 5e-28 MKTNYVGVVEKIRMLSMYPKMLVRFSLVTQDETVNCIVSKCELANMLLMLPEKSELAVYG HLNKRNQLVIDKMLVRKSLISA >gi|237663595|gb|GG668923.1| GENE 199 171279 - 172616 246 445 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 221 434 36 255 329 99 32 2e-19 MAHHGPEDVFITIMTLAGSFLLMLTIHVKLAIATFILLPFITIALGYFNKKMTKANTDIY DNLGEFNAGIEASVSGIRVTQSFANEPFERKQFNYLNQMYRKSKLYFYKVMGVSSAYNYL LIRLINLFSLIFGAYYTIKGEITEGQFVGFILLANIFIRPIEKVNNMIESYPKGFAGFKR FTEEMDKQPAIKDLPGAVAVSHLEGMIAYKDVSFAYEDGTKVLDHINLKIQPGETVAFVG QSGSGKTTLCNLLPRFYEVSSGEITIDGRNIQQMTLASLRKQIGIVQQDVFLFPGTLREN IAYGNLNATEIDIQQAVKLAHLEHVIQLMPDGLDTIIGERGVKLSGGQKQRVAIARMFLK NPPILILDEATSALDTETEQVIQESLNSLADGRTTLIIAHRLATIKHADRIIVVSDQGIL EDGTHETLYAQRGHYRRLYDAQFRT >gi|237663595|gb|GG668923.1| GENE 200 172660 - 173670 927 336 aa, chain - ## HITS:1 COG:lin2301 KEGG:ns NR:ns ## COG: lin2301 COG0180 # Protein_GI_number: 16801365 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Listeria innocua # 2 336 3 331 331 466 70.0 1e-131 MKTIFSGIQPSGTPTIGNYIGAMKQFIELQNEYNCYFCIVDEHAITVPQEPQKLRQQIRS LAALYLAVGLDPQKATIFIQSEVSAHAEAGWIIQCNTSIGELERMTQFKDKSQKNGRAGV SAGLLTYPPLMVGDIVLYNADLVPVGDDQKQHLELTRDFVERFNKRYAQKNQEILTMPEV KIAEQGSRIMSLQEPTKKMSKSDTNVKGFISMLDEPAVIRKKIRSAVTDSTGVIEYNKEE KPGITNLLNIYSAATGQTVEELVQAYEGKGYGDFKADLAEAVVALLEPIQVRYQELLASE ELDMILDEGAENARQVANKTLQRMKNAVGLGRKVRR >gi|237663595|gb|GG668923.1| GENE 201 174030 - 174428 403 132 aa, chain + ## HITS:1 COG:lin2295 KEGG:ns NR:ns ## COG: lin2295 COG1393 # Protein_GI_number: 16801359 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Listeria innocua # 1 129 1 129 131 194 79.0 3e-50 MLTLYTSPSCTSCRKARAWLQEHEIPFKERNIFSEPLNIEELKAILIMTEDGTEEIISTR SKVFQKLNMDLDELPLQDLLELVQENPGLLRRPIMIDEKRLQVGFNEDEIRRFLPRDVRQ LELRQAQLMAGL >gi|237663595|gb|GG668923.1| GENE 202 174771 - 175433 870 220 aa, chain + ## HITS:1 COG:lin2294 KEGG:ns NR:ns ## COG: lin2294 COG4862 # Protein_GI_number: 16801358 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms; N Cell motility # Function: Negative regulator of genetic competence, sporulation and motility # Organism: Listeria innocua # 1 218 1 217 217 91 30.0 1e-18 MEMEHINENTIRVLIGNEDLADRGITFLDLLGNHKDVENFFYSILEEVDVEDEFQGSEAV TFQVLPKNDGLELFISKNVAMDDLSSLEGLSEVNADVSELIRKQIEADKAAADELDEMEA TDETNRNVIFELDNFEAMIQLSKEVFMQSVLTNLYTYNDRYYLQVLFLTDELEKTNVDNE IAQILEFAHKTTVTQDTLVEYGTCIMERSALELTRYYFND >gi|237663595|gb|GG668923.1| GENE 203 175667 - 176845 681 392 aa, chain + ## HITS:1 COG:L168238 KEGG:ns NR:ns ## COG: L168238 COG4469 # Protein_GI_number: 15673710 # Func_class: R General function prediction only # Function: Competence protein # Organism: Lactococcus lactis # 1 288 1 282 329 153 37.0 5e-37 MLTALTADNQELFSLIDCSIDELAQIRSEQAFVCPMCHQSVILKAGPIKIPHFAHRKKNS CWYEAEAETEEHLRLKQLFAEKCLREKLSFQVEAYLPTLKQRPDLLIGKIAIEIQCSPLP IKRLVERTETYQTHGYQVVWILGERLVPKDKLTQLTKQFLYFSESLGFYLWTANKKQERI ELLCHIEESQCQQFYRRKQSWDFYEKKLLEIIQLPTANLNLLPGRQHTGQLMHDYYQKLT QQLGYRNAQLLRTQSFLYTKGCHLLQLPPWFYYPGLKLLPSSEEDIHLKMLVWEALKTKE GRLVTKQELWRILEASFLEEGNFIWQPLPNIGLKKLFKIVGNSLLSWLQECYVLIKVNNK YLITSIFLREDPEKLVHWLKKVKKQHFFSHTC >gi|237663595|gb|GG668923.1| GENE 204 176893 - 178704 2259 603 aa, chain + ## HITS:1 COG:lin2292 KEGG:ns NR:ns ## COG: lin2292 COG1164 # Protein_GI_number: 16801356 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Listeria innocua # 1 601 1 601 601 668 57.0 0 MSEIKQLPTRDEVPTPLTWDLTKIFKDDAAFDVAYNQLTEELNQAESFKGTLGNGAEAFL AALEYVLDVYRKVETLYVYSHLKNDQDTTNTAYQALYARASSLYAQVSEAVSWFDPEVLT LSDEQIWGYFEEQPKLAVYRHYIQNILDERPHVLSMEQEALLAGASEIFGASSNTFSILN NADLEFPTVQNAEGETIQLSHGVYGQLMESVDPSVREAAFKGLYKVYKQFRNTLASTLGA HVKTHNYKAKIRNYDSARAASLASNHIPESVHETLVAVVNKHLPLLHRYVKLRKKLLNVE ELHMYDLYAPLLGEAPIRYSYEEAKEKAIEALKPLGEDYLSIVKEAFSSRWIDVIENQGK RSGAYSSGAYDTAPYILMNWHDSLDQLFTLVHEMGHSVHSYYTRNNQPYVYGDYSIFLAE IASTTNENILTEYLLQTETDPKVRAYVLNHYLDGFKGTIFRQTQFAEFEHFIHTEDAKGT PLTSEYLSEYYGELNAKYYGPEVVRDEEISYEWARIPHFYYNYYVYQYATGFSAASALSK HILAEEEGALENYLNYLKAGSSDFPIEVMKKAGVDMTQAAYIEDAMKVFEERLTELEALV EKL >gi|237663595|gb|GG668923.1| GENE 205 178796 - 179455 631 219 aa, chain - ## HITS:1 COG:lin0963 KEGG:ns NR:ns ## COG: lin0963 COG2761 # Protein_GI_number: 16800032 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis # Organism: Listeria innocua # 2 165 17 181 272 76 32.0 5e-14 MVEIYLFVNPLGGVCLEIEKEIIQLSVNDKKKIQLRFIPLLNMKTINEFLSRQHIPINDI KRRNRIFEDLYSAALDYKAAQLQGRKKGRQLLIGLQKAVAEDGLAYSPELSEELLLAAGG DIDMYRKDRQSDFVKESFQTDQKVAREMGIKQHPTAVVYNYTCENDFGILVENFENMDEI KQLCRVHPHNEPLLDQGDATFEFKRRSNYHFPNGHLHLL >gi|237663595|gb|GG668923.1| GENE 206 179519 - 180097 671 192 aa, chain - ## HITS:1 COG:lin0964 KEGG:ns NR:ns ## COG: lin0964 COG4116 # Protein_GI_number: 16800033 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 185 1 184 194 133 41.0 2e-31 MSEHLEIEFKTLVSPQDFKRLIDHFAIQKTDFFTQTNHYFDTDDFQLKAQRMGLRIRVLA DRGELTLKVPAPEGLLEINDPLSLETANHFIKRNQLPTEGAVAKKLQELGIEIASIHLIG SLKTARAEKQIPQGLLALDESWYNQQHDFELELEVTEAESGKQAFQTLMADLNIPITLAP NKIQRMMRTTAP >gi|237663595|gb|GG668923.1| GENE 207 180294 - 180968 691 224 aa, chain + ## HITS:1 COG:lin0966 KEGG:ns NR:ns ## COG: lin0966 COG2357 # Protein_GI_number: 16800035 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 5 205 4 204 222 263 72.0 1e-70 MEREWELFLAPYEQAVSELKVKLRGIRKQFREQDKHIPIEFVTGRVKPVDSILTKTAIRH IPLNRIEEEMQDIAGLRIMCQFVEDIYQVVALLRNRKDLKIVEERDYIENKKESGYRSYH VVVEYPVQLVTGEKIILAEIQIRTLSMNFWATIEHSLNYKYQGVFPEEMKERLQRAAEAA YLLDEEMSSIREEIQEAQHYFSHGRGLLENEYYKQIKNETPENQ >gi|237663595|gb|GG668923.1| GENE 208 180981 - 181778 679 265 aa, chain + ## HITS:1 COG:L166614 KEGG:ns NR:ns ## COG: L166614 COG0061 # Protein_GI_number: 15672345 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Lactococcus lactis # 2 264 6 268 270 269 53.0 5e-72 MKVAIVHNSEEKSKQVTKQLTTLLEQNQIQIDNRQPEIVISVGGDGTLLSAFHRFNHLLN EVSFLGVHTGHLGFYTDWRDYELKELVESLCIHREKSTSYPLLDVRIRFRDGKPDKHFLA LNESTIKRGNRTMVGDVFIKDELFERFRGDGLSISTPTGSTAYNKSIGGAVLHPSINAFQ LTEIASLNNRVFRTLGSPIVIAHTEWLEIKLQESDDYFVTVDQLDIYQENIASVCYRIAD ERIHFASYRHMHFWHRVKDAFIGED >gi|237663595|gb|GG668923.1| GENE 209 181786 - 182679 261 297 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 39 285 41 279 285 105 30 4e-21 MEFQWTYDKETTQQVKYFLKEQGVSKGLLAKVKFQGGKIQVNGTVQNAIYPLQTGDVVKM TIPDEAEHETLLTDDEPIEIVFEDDHFLVVNKPAGIASIPAQYHPSGTMANRVKGYYKRQ NYVNQVIHVVTRLDRDTSGLMLFAKHGFAHALIDQELREKKVTKIYYALVGGAIEQLNEH QLIEKPIGRDLSSLLKRQVIETGQFASTEYWLAKRGAQAAAVRIQLHTGRTHQIRVHFEA IGCSLLGDEMYHGKMDQGIERQALHCMELIFTHPFTKETVHLISPLAEDMKSVDDTL >gi|237663595|gb|GG668923.1| GENE 210 182710 - 184071 1562 453 aa, chain + ## HITS:1 COG:SA0867 KEGG:ns NR:ns ## COG: SA0867 COG2239 # Protein_GI_number: 15926597 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Staphylococcus aureus N315 # 2 453 6 461 461 408 47.0 1e-113 MNEGQEMEEQFALLLETLKNQQMNEFRELFLALHIYEQGQFYQSLDEKDRQHLYNYLSPK ELADMFDVIEEDNENMKDYLAEMRPSYAADMLAEMYTDNAVDLLNMLDKSQKAKYLSLLS SEEAGEIKELLHYEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ ENHLVGVISLRDLIVNDDDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYD DHLLGIVTVDDIIDVIDDEAASDYSGLAGVDVEEVSENPLKAASKRLPWLITLLFLGMST ASLISNYESLVSEASILAVFISLITGTAGNAGTQSLAVAVRRLAMKDEKDSNFGRLILSE VLTGLVTGAVTGLTIMIVVGVWQHNLPLGFVIGMAMLCAITVANLAGSLIPMLMDKLGFD PAVASGPFITTLSDLTSVLIYFNIASMFMRYFV >gi|237663595|gb|GG668923.1| GENE 211 184189 - 184818 803 209 aa, chain - ## HITS:1 COG:SP1260 KEGG:ns NR:ns ## COG: SP1260 COG3142 # Protein_GI_number: 15901120 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Streptococcus pneumoniae TIGR4 # 1 209 1 209 210 225 53.0 4e-59 MIKEFCAENFTKIPQAIQKGANRIELCDNLAVGGTTPSTGVIEEVLAYAGEHSVPVMTII RPRGGNFVYNDIELKIMHTDLIEAKKLGTDGIVIGCLTEDGWLDEEALDLFIETAEGLQI TFHMAFDALSKENQFKAIDWLAERGVTRILTHGGPAGTPIEDNFDHLKELIAYADQRILI LPGGGISTENVQTVMDTLKVTEVHGTKIV >gi|237663595|gb|GG668923.1| GENE 212 184948 - 185793 639 281 aa, chain + ## HITS:1 COG:L55507 KEGG:ns NR:ns ## COG: L55507 COG0500 # Protein_GI_number: 15673975 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Lactococcus lactis # 1 280 1 273 273 231 45.0 1e-60 MLKKIERAQQLLKKEAAVFRCPTCHEPMHVEGVGLICQQRHQFDLSKKGTLYFLNHGVQT EYNKKMFTSRGKMIQSGMYAPVLNKIMHYLPRNKTVVDVGCGEGSFLAELSQAGLSGLKI GFDLSKEGIYLASNQPIDAFWCVADLTNLPFANEGLDTILNIFSPSHYQEFRRVLKADGT VIKIIPEENYLKELRAAFYPNDEKKQSYSNQKVVQRFAEELAVEVDERITYCFDIPEERR LDLLEMSPLEWQVSQEVKAELQQRPLEKITIDVRLLVGRKR >gi|237663595|gb|GG668923.1| GENE 213 186106 - 186612 581 168 aa, chain + ## HITS:1 COG:SP0486 KEGG:ns NR:ns ## COG: SP0486 COG0219 # Protein_GI_number: 15900400 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Streptococcus pneumoniae TIGR4 # 1 167 1 166 167 237 67.0 6e-63 MTNHIVLFEPQIPANTGNIARTCAATNTPLHLIEPLGFSTDDKHLKRAGLDYWNDVNITY HKDLAAFLAHVAGKHLHLVTKFAHQTYSEVNYNDGEDHYFLFGKETTGLPETFMRENEEK CIRIPMNDEHVRSLNLSNTAALIVYEALRQQNFPNLELTHHYENDKLD >gi|237663595|gb|GG668923.1| GENE 214 186830 - 187039 165 69 aa, chain + ## HITS:1 COG:SP0984 KEGG:ns NR:ns ## COG: SP0984 COG0406 # Protein_GI_number: 15900859 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Streptococcus pneumoniae TIGR4 # 1 50 1 50 206 74 64.0 4e-14 MKLYFTRHGKTEWNQQKRFQGMTGDSPLLSTSYDEIKQLGQYLQDIPFEKFILVRYYVPK ILREEFNKN >gi|237663595|gb|GG668923.1| GENE 215 187036 - 187473 509 145 aa, chain + ## HITS:1 COG:SPy0598 KEGG:ns NR:ns ## COG: SPy0598 COG0406 # Protein_GI_number: 15674681 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Streptococcus pyogenes M1 GAS # 6 139 75 205 207 93 40.0 1e-19 MTHPVEIVYTDTLKELGLGRLEGQYIEEMRNFYGEELDHLRHRLDLYDPTIFDGEPIEQA IQRISETVAEAAKQHEGPVLFVGHGAALTAAIQAMTGKPLSELRTMGGLLNNSLSILETK EASRNMPYDLTLWNDTSFLAKEKSQ >gi|237663595|gb|GG668923.1| GENE 216 187500 - 190109 2883 869 aa, chain + ## HITS:1 COG:L180415 KEGG:ns NR:ns ## COG: L180415 COG0507 # Protein_GI_number: 15673722 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Lactococcus lactis # 10 860 3 824 834 724 49.0 0 MVTLFGEDEEKAFIVGTVQAIFFENPSNFYKVVLVNVTDTNTDYLEKEIVVTGSFGQVQE EEPYRFFGHFVDHPRYGRQFQVDSYQQERPTSASGVVNYLSSDKFPGIGKRTAEKIVEVL GESAIDRIIDDPSVLEEVTVLNEKKRQVIVETIRLNHGMEQVIVGLNRYGFGSQLAFSIY QTYQEETLSVIQENPYQLVEDIEGVGFKRADNIAEQIGIQADSAVRIRAAILHEVFEHSI RSGNTYVQADVLLEEAIRTLEASRPVEISPDQVANEIITLVEHGKIQQEETKLFENSLYF SEWGIGTSIQRLLSRKKEIHYEEEEVQKNIRMIEKRLNIQYGDSQQAAIEEAIKSPLFIL TGGPGTGKTTVINGIVSLFAELNGLSLDLKDYTQEMFPILLAAPTGRAAKRMNETTGLPA STIHRLLGLTGREKNPSLTAKELEGGLLIVDEMSMVDTWLANTLLKAIPTNMQVIFVGDK DQLPSVGPGQVLHDLLQINEIPKCELNEIYRQGDGSSIIPLAHEIKEGKLPADFQKNQKD RSFFASDIGHIEEYIRQIVTKAKAKGFTPQDIQVLAPMYRGAAGIDALNKMMQEIFNPND GKKKEVKWNDTVYRIGDKVLQLVNTPELNVFNGDMGEIVGITLAKDSEDKVDELVLQFDN NEVTYKRNEWNKITLSYCCSIHKAQGSEFRMVLLPMVHQYSRMLQRNLLYTAVTRSKELL ILLGEVSAFETCVKNESASRMTMLKERIVNAEQMTLTTRTQLEAYEEGLTADHPFTETET KAVYYETEQQSTKANQIKETDEQLVDTTVQEVSLFADEGEESTPETANKATKVVEEPLPK EPRLTVEIIQTNAVDPMIGMKDTTPYQFM >gi|237663595|gb|GG668923.1| GENE 217 190176 - 191135 849 319 aa, chain - ## HITS:1 COG:L39484 KEGG:ns NR:ns ## COG: L39484 COG1597 # Protein_GI_number: 15673780 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Lactococcus lactis # 5 319 3 302 302 164 35.0 1e-40 MNIHYYLIINEQASSGNGRKVARKVIQQLKQQELKYTALYTDYAGHEKELTKELAETTLL PWSEDLDVSTFPILVVLGGDGTLHNVINSLLPYDSAIPLSYIPCGSGNDFARGVGLSRNI DKALHQILRTRRPKEIQTIHYVEANQEEIGLATNNVGLGLDAAIVEKTNESSSKKALNKF KLGSLSYISSIIHVFFKQKGFPILVEMNGKQYTFNRAFLCTVTNHPYFGGGVSIMPTANP RKAVVDLVVVERINIFKILWLIFLLLRQKQGKSKHFHHFQSSKIRIVSTIPQTIHADGEI LGKRSIDMVYTTQKRLFWF >gi|237663595|gb|GG668923.1| GENE 218 191445 - 192575 436 376 aa, chain - ## HITS:1 COG:SA1835 KEGG:ns NR:ns ## COG: SA1835 COG0582 # Protein_GI_number: 15927603 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Staphylococcus aureus N315 # 1 376 1 382 390 142 30.0 1e-33 MASIKQQPNGKWRYRIRYKENGKFREVSKSGFRTKRDAQAAANELERKLNSGLVVQHNKD ILVQEYLSSWIKLKEKQVKKSTLAKLNRAIRLHILPQFAYYKITEIRRIDCINWVNEMCT HLSIESAKSYCSTFNSALEDAVNDFKLIDSNPMKNIKYPKTEKRKTAIQFFEKRELQNLL VTAESYKGTKPFINYQYYVLTFLLARTGLRLGEALALKWEDVTEDKLTVSKTLYRENNQN FITTPKTISSYRTIILDKKCIELLKSFKIKKIEHSLKSNAFILNKEFVFTDSKGDFLKQC NYRTYFTTICTLADVPKLSPHALRHSHAVHLLESGSNIKFVSERLGHHTINMTANVYLHV SKKMETESISRYENFL >gi|237663595|gb|GG668923.1| GENE 219 192587 - 193003 169 138 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227519605|ref|ZP_03949654.1| ## NR: gi|227519605|ref|ZP_03949654.1| hypothetical protein HMPREF0348_2588 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2588 [Enterococcus faecalis TX0104] hypothetical protein HMPREF9517_00587 [Enterococcus faecalis TX1341] # 1 138 1 138 138 251 100.0 2e-65 MCKQTDLQKLFSQRKKAKILPLSVSLEITTQPSKTTFINTEVLVNEMDIPHTYDLIGIVK DDIAFFHIDELVYIQLTQDITKAGFYVIKTEFGIEIVVKKYGNEIYTSLKRRRGNKNKPL YQKYHVEDFLFIFGKIIY >gi|237663595|gb|GG668923.1| GENE 220 193065 - 193850 475 261 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227519606|ref|ZP_03949655.1| ## NR: gi|227519606|ref|ZP_03949655.1| hypothetical protein HMPREF0348_2589 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2589 [Enterococcus faecalis TX0104] tetratricopeptide repeat protein [Enterococcus faecalis TX1341] # 1 261 1 261 261 476 100.0 1e-132 MKFFTNLQSYKKQLEKFYIKEKYETIPFLPSEEECKRILAEYKTFPSVIVPKENMKKLNN GLLPGHIIMLWWICNPRTNKENIPLYFLYEYGIDFHKQFDFLISKNYIIGKWIISELGRK TIEKYEYIIRNHKAFKTIDKNGNIKYSYQDKKRTQVNGKIIPFKSTGDFVEDQHLGYSYE QNKDYPNAIKAYESALRLSLKDKMFSNCPPPNIFTRLAIIYRKQKDYSSEIKVLNQALMY YPSSETFQKRLEKAKLLNTKK >gi|237663595|gb|GG668923.1| GENE 221 193868 - 194347 288 159 aa, chain - ## HITS:1 COG:lin1763 KEGG:ns NR:ns ## COG: lin1763 COG2856 # Protein_GI_number: 16800831 # Func_class: E Amino acid transport and metabolism # Function: Predicted Zn peptidase # Organism: Listeria innocua # 13 141 14 140 140 64 31.0 6e-11 MSRQRIRKLAHKLIEKYNTSNPYELCDYLGVPIYYMDLGKNILGFRSVLNRAPMLLLNTR NSEEEEYIVCIHELGHHCCGHTNNADQLTRNNMRFIAQGDEYEANCFMIEILLYGVNLAE YPTKECLLRSCGIPSWAERYVDWKYLEETANFDSYNSYY >gi|237663595|gb|GG668923.1| GENE 222 194363 - 194797 437 144 aa, chain - ## HITS:1 COG:lin2607 KEGG:ns NR:ns ## COG: lin2607 COG1396 # Protein_GI_number: 16801669 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 1 70 1 70 107 77 54.0 1e-14 MNLLERIKELCKKRSISVSRLEEELSFPKNTIYQWKNRTPGTDKLSIVADYFGVTIDYLL GRTDTPQFSAKNERDVQKMLSEMKDGLTNKHTLAYFKNDGEEIDEEDAELLAEALEFVVR QSKLIAKKKFTRKDYRKNNHDDLA >gi|237663595|gb|GG668923.1| GENE 223 195090 - 195308 344 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519609|ref|ZP_03949658.1| ## NR: gi|227519609|ref|ZP_03949658.1| hypothetical protein HMPREF0348_2592 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2592 [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis TX1341] # 1 72 1 72 72 120 100.0 2e-26 MYVTDFAELAEVMMKRKQLKLKDIAEHIGTSSVYAKQIIEGYQRGEKADSYKLKIADFLD IDRKYTNVKQPM >gi|237663595|gb|GG668923.1| GENE 224 195320 - 195637 351 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519610|ref|ZP_03949659.1| ## NR: gi|227519610|ref|ZP_03949659.1| hypothetical protein HMPREF0348_2593 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2593 [Enterococcus faecalis TX0104] hypothetical protein HMPREF9517_00582 [Enterococcus faecalis TX1341] # 1 105 1 105 105 189 100.0 4e-47 MFSQPEVPVQVNVQVDNQYLDKHLKEYVEQYCKTFLQPEWYTMSDMEKITRHKRAWIMQN IVDDPYVKKNKLAKKESDSVNAQWLFDAERIRPFLKWLYIELPDY >gi|237663595|gb|GG668923.1| GENE 225 195657 - 195935 327 92 aa, chain + ## HITS:1 COG:no KEGG:LCABL_09620 NR:ns ## KEGG: LCABL_09620 # Name: not_defined # Def: hypothetical protein # Organism: L.casei_BL23 # Pathway: not_defined # 1 89 1 89 240 113 68.0 3e-24 MDNLVIMKNQQAVTTSLQVAEVFEKQHKHVIEAIEAKIQSAENSAYYQSMFVEGEYKDSR GRKQRLYYMNRDGFSFIAFGFTGKKADSFLAS >gi|237663595|gb|GG668923.1| GENE 226 196337 - 196495 129 52 aa, chain + ## HITS:1 COG:no KEGG:EF2037 NR:ns ## KEGG: EF2037 # Name: not_defined # Def: antirepressor, putative # Organism: E.faecalis # Pathway: not_defined # 1 51 189 239 240 93 84.0 3e-18 MKALFDVASYVDIPKVRYEEALTLIPKWKPDLELQARIDMANGNRDMFKEVS >gi|237663595|gb|GG668923.1| GENE 227 196535 - 196717 150 60 aa, chain - ## HITS:1 COG:no KEGG:EF2036 NR:ns ## KEGG: EF2036 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 60 1 60 62 79 88.0 3e-14 MFFVIKRASDKKYYFLIKTEENEIIASSKTYYYKSSVLEIIESIKNDMNPKAIIVDTTFN >gi|237663595|gb|GG668923.1| GENE 228 196771 - 196965 183 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519614|ref|ZP_03949663.1| ## NR: gi|227519614|ref|ZP_03949663.1| hypothetical protein HMPREF0348_2597 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2597 [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis TX1341] # 1 64 1 64 64 125 100.0 1e-27 MKAIREARLIGTFLLMIALGVLLKTHFSMPILATLSAPFFIHWFFNWDEAKYQYSKKGGD EKCM >gi|237663595|gb|GG668923.1| GENE 229 196956 - 197141 291 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519615|ref|ZP_03949664.1| ## NR: gi|227519615|ref|ZP_03949664.1| hypothetical protein HMPREF0348_2598 [Enterococcus faecalis TX0104] hypothetical protein [Enterococcus phage phiFL3A] hypothetical protein HMPREF0348_2598 [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus phage phiFL3A] conserved hypothetical protein [Enterococcus phage phiFL3B] # 1 61 1 61 61 94 100.0 2e-18 MYVAVGEASRETYVIGETQAEVFRKLLEEYPYVSFDEGVYPERLSIVQKEPQSSANEQGK Y >gi|237663595|gb|GG668923.1| GENE 230 197184 - 197507 354 107 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519616|ref|ZP_03949665.1| ## NR: gi|227519616|ref|ZP_03949665.1| hypothetical protein HMPREF0348_2599 [Enterococcus faecalis TX0104] hypothetical protein [Enterococcus phage phiFL3A] hypothetical protein HMPREF0348_2599 [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus phage phiFL2B] conserved hypothetical protein [Enterococcus phage phiFL3A] conserved hypothetical protein [Enterococcus phage phiFL3B] conserved hypothetical protein [Enterococcus faecalis TX1341] # 1 107 1 107 107 182 100.0 1e-44 MNEKIQNLLMELVKECQRGEVALVLATVDPERMEPSSVLLAGSLPEQAIAFNELFEKFKE EALAHDCNCPHCKQIKEALIGAESSSTKQNNEEKLDILLKDFLRGEL >gi|237663595|gb|GG668923.1| GENE 231 197507 - 197734 207 75 aa, chain + ## HITS:1 COG:no KEGG:EF2843 NR:ns ## KEGG: EF2843 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 73 1 73 74 104 67.0 1e-21 MIEVRGLGNDIYELMLANAQNNIVQSVRTSASYGNTSCVVSSKGATKPFLDQLQIQGVDY IELEDEKIKLFWEGL >gi|237663595|gb|GG668923.1| GENE 232 197734 - 197832 183 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPEFDSLGARQEPPEEKEVLELTWEYDEEEEQ >gi|237663595|gb|GG668923.1| GENE 233 197829 - 198104 295 91 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519618|ref|ZP_03949667.1| ## NR: gi|227519618|ref|ZP_03949667.1| hypothetical protein HMPREF0348_2601 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2601 [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus phage phiFL3B] conserved domain protein [Enterococcus faecalis TX1341] # 1 91 1 91 91 107 100.0 2e-22 MIEEILHSIKKEQEITNSLLEIIANRIERNRKSVVYSSDNSKDDLLKRIEELSEENILLK SRAEQAEKSSNIANDELSKLRMSIFSNRRIG >gi|237663595|gb|GG668923.1| GENE 234 198066 - 198320 86 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315168764|gb|EFU12781.1| ## NR: gi|315168764|gb|EFU12781.1| hypothetical protein HMPREF9517_00575 [Enterococcus faecalis TX1341] # 1 84 42 125 125 154 98.0 2e-36 MIDETRHSINFLLLNKNSCYDIVTGIFPTKPILGHLELEMDTSCLSMIEKVYKNNRFDTD FIGFELDSIKLFLSDSSITKDTHS >gi|237663595|gb|GG668923.1| GENE 235 198380 - 198442 62 20 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYDYLMSQNYKKLLMANSSK >gi|237663595|gb|GG668923.1| GENE 236 198515 - 199456 800 313 aa, chain + ## HITS:1 COG:BH3544 KEGG:ns NR:ns ## COG: BH3544 COG5377 # Protein_GI_number: 15616106 # Func_class: L Replication, recombination and repair # Function: Phage-related protein, predicted endonuclease # Organism: Bacillus halodurans # 5 294 10 300 320 270 47.0 2e-72 MSKSTLEMTHDEWLLDRLKGIGGSDVATILGLNQYKSAYQLWLEKTGQIELTETDSEPAY WGTILEEVVAKEFQERTGKKVRRRNQVFEHSLHPFLRANIDREVVRENAILECKTANQFL AKEWAGDEVPLSYLCQVQHYMNVLNKDYCYIAVLIGGQKFIWKRVERDQELIDVLTEQLV DFWENNVIKGVEPIIDGSKATADFLKDKYSDIEETQTTLPASFDELIDQKNEMKKTKKEL DVAIRKIENEIKSELGKRNASIGITKKYIVEWKEIPTKRLNSKKIAEKYPQIAEDEEIYM VTKPRRLIEKEIK >gi|237663595|gb|GG668923.1| GENE 237 199459 - 200349 1011 296 aa, chain + ## HITS:1 COG:lin0085 KEGG:ns NR:ns ## COG: lin0085 COG3723 # Protein_GI_number: 16799163 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecE pathway) # Organism: Listeria innocua # 1 255 1 241 271 256 54.0 3e-68 MATNETLKNQLSQQNQKQVPANQLGLKGLMNTPTMKRKFEEVLHENANAFMSNVMTLVSN DSYLAESEPMSILSGALTAATLNLGLDKNLGYAYLVPFNTKNKQTGKWERKAQFILGYKG YIQLAQRSGKYKALNVIEVYEGELLSWNRLTEEFEFDPNGRQSDDVIGYVGYFELLNGFK KTVYWTKQEIEAHRIVNSKDKEKTKLSGVWATDYNAMARKTVLRNMLSKWGILSIEMQEA TTSDEKVQQMQEDGTIISETEVEENTTLKTAEVINEANSDSLNQTDLFDTKNPPLE >gi|237663595|gb|GG668923.1| GENE 238 200363 - 201325 566 320 aa, chain + ## HITS:1 COG:no KEGG:EF2130 NR:ns ## KEGG: EF2130 # Name: not_defined # Def: DnaD domain-containing protein # Organism: E.faecalis # Pathway: not_defined # 1 261 1 257 283 206 47.0 8e-52 MARPAKEGLDYFPLDVGIFEDEKIEAIAGEFGIKGELAVIKLLCAIYKKGYFILWDDLSQ ATLLKRLPGVSKEMLNQIVNRLVLWGFFDKELFDSVKVLTSENIQATFFEATKRRKTPKP TKYIVNVNSNSQSETVNADINTQSKVKESKVNKSKVNKKETESCINPSSPETSVEKAFFE EPLGEEKLTELIRYYSQNVSPATPVNITDLQYDLADFDGDLELLKEAVNICARNNERRYS YFAGILKNWRANGVKTYADYLNNERERADKKTQNKQYQNKPVRQEKVPEWMNQANGEEEK LSPEEQAELDRQIKDFLEGK >gi|237663595|gb|GG668923.1| GENE 239 201325 - 201624 418 99 aa, chain + ## HITS:1 COG:no KEGG:SH1788 NR:ns ## KEGG: SH1788 # Name: not_defined # Def: hypothetical protein # Organism: S.haemolyticus # Pathway: not_defined # 1 99 4 102 104 103 55.0 3e-21 MNELVKLVEEWAKEKRLDKAEPEKQMLKVIEEVGEVGAALARNNENDLRDGIGDVVVTLI ILAMQNNMDLYECLNQAYSEIKKRQGKMVNGVFVKEADL >gi|237663595|gb|GG668923.1| GENE 240 201642 - 202067 325 141 aa, chain + ## HITS:1 COG:lin1248 KEGG:ns NR:ns ## COG: lin1248 COG4570 # Protein_GI_number: 16800317 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Listeria innocua # 1 137 2 136 145 86 35.0 1e-17 MRIILPIEPKPQSRPRFARRGNYVQTYEDSAMRAYKQKVKVYLRKAKPKLIEKGPIMAHV TFYVQAPKSALSNKQKRLDVKLERKYCDKKPDLDNYFKAVTDAAEGILYKNDGQIAVMVC QKLYSMRQRTEIEIMSLEEKE >gi|237663595|gb|GG668923.1| GENE 241 202064 - 202825 613 253 aa, chain + ## HITS:1 COG:no KEGG:EF1437 NR:ns ## KEGG: EF1437 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 250 1 248 249 350 72.0 3e-95 MTKNKLRETKRAIRHRILFLTGDDESWMNNSEIVEEVQRLSKQLNSNLINDKRPLPKIDP DKLTKEEYQRLLDLGYQVNDIKKALGLGTTTFQNWRKANGIENIIKRKENNKVEENKRMK FNLNTATLLISNNFGVKAEECLTISKSGLALSGPVVQRLNKPEWVQLYLDEQNKALFVLP CEATAEGARSCVSPKANKKTGYRKSWNGHVLRKAAEVVGFNIETDVYHVKPEEVEGHPNA LGFDLTKAVKVNG >gi|237663595|gb|GG668923.1| GENE 242 202818 - 202961 60 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGKTKSKIKKKKRRLKEKAIANGTYNKRGKNDDVHKMQGTDDCLGKR >gi|237663595|gb|GG668923.1| GENE 243 203399 - 203605 254 68 aa, chain + ## HITS:1 COG:no KEGG:EF2123 NR:ns ## KEGG: EF2123 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 67 1 67 70 113 91.0 2e-24 MKLIYVLTGKEENKNYVKKFVGNYCSFGPKEDAKAFTSEEAEQMRKLLENSVGNAFVIDD DRVLSQGG >gi|237663595|gb|GG668923.1| GENE 244 203609 - 203803 364 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257415553|ref|ZP_05592547.1| ## NR: gi|257415553|ref|ZP_05592547.1| predicted protein [Enterococcus faecalis AR01/DG] hypothetical protein HMPREF9505_00348 [Enterococcus faecalis TX0109] predicted protein [Enterococcus faecalis ARO1/DG] hypothetical protein HMPREF9505_00348 [Enterococcus faecalis TX0109] # 1 64 1 64 64 88 98.0 2e-16 MDALEVLQKIQELKEIYGDIEVMVKSNSEGNEFFKKIIDVDLQAGMIDEEGEFIDEKVIL IICE >gi|237663595|gb|GG668923.1| GENE 245 203816 - 204040 309 74 aa, chain + ## HITS:1 COG:no KEGG:EF2121 NR:ns ## KEGG: EF2121 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 73 1 73 74 112 90.0 5e-24 MIYIKNFIHDVDSSTITFEVERDGVTNYVETRDTGYGTTSIDINDFTEDWSDSEYNQLEE FLNGCQEIVHSFHR >gi|237663595|gb|GG668923.1| GENE 246 204007 - 204096 105 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRNSAFVSSLKDYIVGVEIIDFVEEETE >gi|237663595|gb|GG668923.1| GENE 247 204093 - 204332 398 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519629|ref|ZP_03949678.1| ## NR: gi|227519629|ref|ZP_03949678.1| hypothetical protein HMPREF0348_2612 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2612 [Enterococcus faecalis TX0104] conserved domain protein [Enterococcus faecalis TX1341] # 1 79 1 79 79 120 100.0 5e-26 MKYKIAVTETMSATRYIEVEYDEDIDELLHDVENSPYEENVASILEELGATILKEDQPIV GKIGDWETESLDYSVMEVK >gi|237663595|gb|GG668923.1| GENE 248 204333 - 204611 399 92 aa, chain + ## HITS:1 COG:no KEGG:EF2120 NR:ns ## KEGG: EF2120 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 92 89 180 180 143 89.0 3e-33 MKFYEIKDPYFALIVAEDEKQCLKLYKDIVCEVEDEKEFFDDMKTIDKYEAFKMLAKSHI EDSGELGVEEAFNQLENLEEDGEVLLIDGSLI >gi|237663595|gb|GG668923.1| GENE 249 204624 - 205079 388 151 aa, chain + ## HITS:1 COG:no KEGG:EF2119 NR:ns ## KEGG: EF2119 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 53 150 1 104 105 115 66.0 6e-25 MLTTLKVYKEGFNESIKIGESVDYAGDKYIVIRILEIKKLYFSKSVRLELRILVQKVGVT TNYNKYKKQAQVIEHYDQSKENERMKKVGDIVILDKKIAYEVISINSIHYEFVDLVVEYT VQMVVPWSEQEINKALKEERKSTFKVLEGGK >gi|237663595|gb|GG668923.1| GENE 250 205079 - 205582 609 167 aa, chain + ## HITS:1 COG:no KEGG:EF2118 NR:ns ## KEGG: EF2118 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 115 1 115 184 157 82.0 2e-37 MNKQELIEELECLEVPTDSLDYLKGANYAVEKAISLAKQLKESKKAVLPKSADEFIKEGL SMGSDKVDIIGSAVSFSSSMPDDEFSLWFKSNRDLFVDTLANGYEVEKEPLYYVLLSDKG ATNIGYTFLNLAGTIDFTICKEKVDMLTENQIKAIDERYWPFAVKVE >gi|237663595|gb|GG668923.1| GENE 251 205589 - 205738 163 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKDKKFSPLTIICVIIGICWVVSIVGIGYFISHPELIGHWFSRLISGFK >gi|237663595|gb|GG668923.1| GENE 252 206552 - 206740 82 62 aa, chain + ## HITS:1 COG:no KEGG:EF2024 NR:ns ## KEGG: EF2024 # Name: not_defined # Def: ArpU family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 62 78 138 138 70 51.0 2e-11 MALSLISRQVLYYSFCDVEKHTNWEIGQLIRGYGEKNVEKLKSNALIEFAEAYKHGILVV YK >gi|237663595|gb|GG668923.1| GENE 253 207797 - 207883 62 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSVFEALLLMIAFATLVLLIIDHTNTKK >gi|237663595|gb|GG668923.1| GENE 254 208450 - 208680 241 76 aa, chain + ## HITS:1 COG:no KEGG:EF2021 NR:ns ## KEGG: EF2021 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 23 73 1 51 55 79 74.0 4e-14 MKSYWYVSLTHKYPQSNRSTDSMRVVMSVQIKKNASIVEMTREATPKEIDSCKLVYCGYG SWKDKHILENVEKYMS >gi|237663595|gb|GG668923.1| GENE 255 209768 - 210313 435 181 aa, chain + ## HITS:1 COG:no KEGG:EF2017 NR:ns ## KEGG: EF2017 # Name: not_defined # Def: terminase, large subunit, putative # Organism: E.faecalis # Pathway: not_defined # 4 165 295 456 463 246 76.0 4e-64 MPENIIKIWNYTDTADKGADYFASPVFAETADHRAYLLDVLYTKEPMEVTENAHANMIIR NKVNHVRIEGNNGGRGFRRNSERLVKERGYYTAYYEDFHQSANKYSRILSNSAWIENNVY YPSDWATRWPEFYFAMTTYQREGKNAHDDAPDAVTGIAETLQIQNPQNLKDRMNAAKFFF G >gi|237663595|gb|GG668923.1| GENE 256 210326 - 211861 1266 511 aa, chain + ## HITS:1 COG:no KEGG:SPs0431 NR:ns ## KEGG: SPs0431 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_SSI1 # Pathway: not_defined # 3 492 2 494 510 572 61.0 1e-161 MDKEITFLQKHRYHKNANTIFRISCEDFETIEFASEDWIYQLEKFINQHKTEQVPRLLEL KRYYLADNNIKYKPAKTDEFAADNRIASDFARYITIFEQGYMLGQPVQYKNEDEKIQEQI DDFFKRNNEDYHNVLIKTDLSIYGRAYELLTTVLDETGGAYVKLVKLKPEQTFIVYDDTT DNNSLFGVYYYTLDYGDGVRKDFVNVYTSDMVYMYVNSNQEEKELHLYDSDDHVFDGVPI NEFANNEDRTGAYEPVLDSIDAYDLSQSELANFQQDAMDAILMITGNPYTGTAPNDLDED GNVVPNSKLAVSLAFKRARIMIMDDNPNPNGSTPDAKYLVKEYDTEGAETYKQRLVNDIL RFTFTPDTLDANFSGTQSGEAMKYKLMAADNRRVMQQRLFEKGLMRRLRLAVNIWRIKGN DSVAYDQINNTNVIFTANVPKSDSEIVALAGQLYGTVSDETLFEILSTVTGIDPEVELTR IKEEAEEKPAPRRPEVDVIEDDQEDDDEEIS >gi|237663595|gb|GG668923.1| GENE 257 211839 - 212765 739 308 aa, chain + ## HITS:1 COG:SPy0975 KEGG:ns NR:ns ## COG: SPy0975 COG5585 # Protein_GI_number: 15674985 # Func_class: T Signal transduction mechanisms # Function: NAD+--asparagine ADP-ribosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 2 299 1 312 541 101 24.0 2e-21 MMTKKSASYWSKRMDEIMAYTDQTDIDFFDELQAIYTENRQIVQKEIYAFYAQYAKENKI SVQEAKKRLMREDLSNYRANAEKYFKQAEKDPELLKRLNEQYKAGKVTRLEALQLNLEWQ LGKMSGALHQSFVRYLKEVAQYAYRKITGGNSQSTLNKPALEQIVKTPFNGKNYSDSIWG NIDTLAKDLKKVLTQGFIRGSGPADMARELRKKYNVAKSRAEAIVRTDGTNVINLSAAKR FEEFGLTRYKNNVHVDSRTTDICLQVNRENKSYLLSEYQPGVTAPPYHVGCRTGIVPDDS ELGFEDET >gi|237663595|gb|GG668923.1| GENE 258 212893 - 213507 828 204 aa, chain + ## HITS:1 COG:no KEGG:LACR_2103 NR:ns ## KEGG: LACR_2103 # Name: not_defined # Def: hypothetical protein # Organism: L.lactis_SK11 # Pathway: not_defined # 6 174 38 211 245 108 51.0 2e-22 MKNKLLLPLNLQLFAENPEGSQENEPTDTSTLPEDKQKEEPKEKTFTRSDIAKMLAAEKS KWEQEYEAKVEKERNEAARLAKLSEKDRQKALFDKEREDFEKEKETFRKEQLFVEKGKQL TTQGIPADFAHRITGETAEEILEDVKAFRAEWDKAVELKVNERLSSKKKTKVGATSGQMT KAEIMAIKDTKERQRMIAENRELF >gi|237663595|gb|GG668923.1| GENE 259 213525 - 214460 1227 311 aa, chain + ## HITS:1 COG:no KEGG:SPs0436 NR:ns ## KEGG: SPs0436 # Name: not_defined # Def: major head protein (phage associated) # Organism: S.pyogenes_SSI1 # Pathway: not_defined # 22 306 2 286 295 360 66.0 4e-98 MKNMSKTNKEKLLKMDLQMFAAETNLTKMADLGEIKSIDFVNRFEAGIKELLALLGVTRL EPLSQDLKIQTYKWETDVKDGSVAEGEDIPLSKVTRAKDKDYTVTFNKWRRAVSAEAIAR HGASLAIDKADNRLLRQIQGNLKSKFVTFLGISPTKVTGVGLQKALATSWGKLSTFEEFD GADFVSFVNPMDVATYLGDTKVLADASNVFGMTLLKNFLGANNVVVLNAIPEGKIYSTAV DNIVLAYLDMKASDLGDIFVDFVDETGFISATRGRTLRNATYESLFMNALVLFTEIPKGV VEATIEQESPK >gi|237663595|gb|GG668923.1| GENE 260 214460 - 214522 86 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAPVVGKVTPTADGATIEMK >gi|237663595|gb|GG668923.1| GENE 261 214531 - 214902 218 123 aa, chain + ## HITS:1 COG:no KEGG:Spy49_0775 NR:ns ## KEGG: Spy49_0775 # Name: not_defined # Def: hypothetical phage associated protein SpyM3_1428 # Organism: S.pyogenes_NZ131 # Pathway: not_defined # 7 122 6 118 118 88 46.0 1e-16 MTEKTFLLEEIKLLLGIYDQLQDPLLTLIIEDSEQRILSFLNQFSVKNGTEKYQTIPADL IYIHRDVAIKRFNKRNSEGATADSEEGRSYTWESSYLNEYLDIFEEYTKPMLRAGRGITR FIS >gi|237663595|gb|GG668923.1| GENE 262 214899 - 215180 210 93 aa, chain + ## HITS:1 COG:no KEGG:MGAS2096_Spy1458 NR:ns ## KEGG: MGAS2096_Spy1458 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS2096 # Pathway: not_defined # 1 90 1 90 92 67 38.0 2e-10 MNYNDRVKITFERKVPSYLGEDTLEEQELLLSCGKTGISSEEQIGIFGKYNKSAFKLYIQ GIHRGFSKIEYEGVERSVYLTKWHRNSTVVILT >gi|237663595|gb|GG668923.1| GENE 263 215177 - 215521 417 114 aa, chain + ## HITS:1 COG:no KEGG:MGAS2096_Spy1457 NR:ns ## KEGG: MGAS2096_Spy1457 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS2096 # Pathway: not_defined # 1 113 1 113 114 103 48.0 2e-21 MSKSVKIQGLKEFMREVSRKGPALDQAIDKEINLSALRVEKCAKELAPWDTGWLSNNIYA NNIGFLQAEVISPAEYSIFVEYGTRYMFAQPFLFPAVRADWPLLQKRLTKLVRG >gi|237663595|gb|GG668923.1| GENE 264 215526 - 215876 271 116 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0460 NR:ns ## KEGG: GALLO_0460 # Name: not_defined # Def: phage unknown protein # Organism: S.gallolyticus # Pathway: not_defined # 2 115 4 118 119 93 45.0 3e-18 MYSPMTEYLKKLSEKLNDTKIPVYFKLPDVSIKEPFYVIGSHTGDDSRSAKFGTAIVDTT LQIDLFYPIDSRTKVEEAIFQTKVALNKRMTHQLLIDHSIGREVYHIIFRISDLII >gi|237663595|gb|GG668923.1| GENE 265 215891 - 216532 902 213 aa, chain + ## HITS:1 COG:no KEGG:LEGAS_1582 NR:ns ## KEGG: LEGAS_1582 # Name: not_defined # Def: phage major tail protein # Organism: L.gasicomitatum # Pathway: not_defined # 13 187 8 183 188 182 53.0 9e-45 MTTINNGVRKFTGKAVTAKKVWYFIQSVKVPIGSPALLPAFQTEGGVTYGGDNIDEQTKM GRIIIKSTDEHSIELTQYFIPNDESIKVVKDAKKNGDSVKVWRVVIDESVAKVADGLEDV KLYPAEFGYGMPDDVEIQDGDDLVEASYTLNIIGKLQEGEFPLSNADIAAIEALYDYQNP GETTGDFDRIQTVAAPKVGKVTPTNTGAKVELS >gi|237663595|gb|GG668923.1| GENE 266 216553 - 216735 382 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519645|ref|ZP_03949694.1| ## NR: gi|227519645|ref|ZP_03949694.1| hypothetical protein HMPREF0348_2628 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2628 [Enterococcus faecalis TX0104] conserved domain protein [Enterococcus faecalis TX1341] # 1 60 1 60 60 96 100.0 7e-19 MADTFRIYKGKEKVLEGSSPLTITGLTASTDVKKGTYQAVRVRDGKESAKVDIPAFRTTA >gi|237663595|gb|GG668923.1| GENE 267 216807 - 217280 410 157 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0462 NR:ns ## KEGG: GALLO_0462 # Name: not_defined # Def: phage unknown protein # Organism: S.gallolyticus # Pathway: not_defined # 4 157 2 154 154 75 36.0 5e-13 MSFDINLKGKEQKIKFNYMLNFKANKKLATKDKEGKSQNDGAGVLFVQVLEKEDDALVNL LQLVDCKATENDALEAIDTYVRELVESGLSEEEAYNRIFEDLKQEMLASGFFVSKIRKYL ENIEKVIEMMESRKKEEDKVQIMQLKELSERIKKEIS >gi|237663595|gb|GG668923.1| GENE 268 217322 - 217591 84 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519647|ref|ZP_03949696.1| ## NR: gi|227519647|ref|ZP_03949696.1| hypothetical protein HMPREF0348_2630 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2630 [Enterococcus faecalis TX0104] hypothetical protein HMPREF9517_00826 [Enterococcus faecalis TX1341] # 1 89 1 89 89 129 100.0 7e-29 MNCYLWELEAILEGLALRELDKQEQNVVFGFNLRYILNAKKPQMNKILNKKKVEDKIRKS FTRNQKQVNKNHQRLEKAMQALEHFKNRR >gi|237663595|gb|GG668923.1| GENE 269 217600 - 221481 3699 1293 aa, chain + ## HITS:1 COG:no KEGG:MGAS2096_Spy1452 NR:ns ## KEGG: MGAS2096_Spy1452 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS2096 # Pathway: not_defined # 13 1292 140 1457 1460 471 31.0 1e-130 MAENITGAIKALIGADTSDYKKAMAEVLSVTNSTMNQVSNTMSQSTNSIVSKVGSIMGQL SSTIQSKLTGLKTSMVAPFSTAGGQIQRVIASIGEKIPQPIRKGFSTASKAANDASSLIA KGLNRIVSASTIVGRKVGSHLTSAFNRAGTKAATTLNGIISKTKSAGSSTGSFIKQAVGI GAAFTLAQKAIGGLTSGISSLIGDLNQGSATWKTFNANMENIGMGKKEIAGVKKELQDFA TKTIYSSSEMATTYSQLAAVGIKSADQLVKGFGGLAAAAENPTQAMKTLSQQATQMAAKP TVQWQDFKLMLEQTPAGIAAVAKQMGMSTSEMVTAVQDGKIKTEDFFDAITKVGTNNTFS KMATEYKTVGQAMDGLKETLTNKLQPSFDKLSQVGINAISKITDKIDSFNMTPIEKAVDS VVAILDHFVNGTELSNEALANMQNIISKILPLAGLLGGALTLNSALPILASLTAGFISFS GILSGPLKSAFDLVSRNVSGLIGLFPKIGGGLSSAASVGMGALGGMTSAMTTIMQVALAA VGPAAILGLVVAGLGLVNNQFGTQIDDLLKMVTTKGPEVISKFVQGIMSQIPQLITSGTE LISKLVNTIATMLPVIVQAGIDIIGSLVGGVAQNLPSLISSALTIITTILTSLASALPQL IVMGMNLLLSLVNGLVTNIPQIVSSVQQILQAFVGNIVANLPQLIVMGMNLLLSLVNGLV TNIPQIVSSVQQILQAFVGNIVANLPQIIQTGIQILLNLINGLTEMLPQLLPVALTAILT LINGLMANIPQLLNGAVEIVQALCNFIVQNLPMILQAAVQILQSLVSGIVQNLPNIISAG IQIIFSLITTIIQMLPSVLAAGWDIIKSLASGIIEAIPNVLKGAWDGIKNGFSNLWDTIT GKSKETSTEVTSTYSQTAESMKSKTEELGSSVSTSFDQMGLNISNATSNISTSALGDFSS ILSQGSSDAQTLNTNVTNATQALQQAGSSDIRQLNTSGSADFSNLLSSGTASVQELEKKV SGSMSGASSNATNETKKMEGELKNSFQTMSTVVNTSMNSIKSSMQAGFSGITGQVTNSMS QIHSQIQISMNQVQQTISSGINTVSHTFQSGMIQLFQVSIQASSQIVSAFSSLSSQLDIL GYNAGIGLANGLSSSAGAIYSTTNIIANNVARTIQSALDIHSPSKITTWMGEMLGKGLGL GMQSMFSFVEKQANEFGSIIQAQCYQAEAVMVGDTTFTNKNIHAFTDEMDQDVAESELRQ EEIHIYNEVIGDKIYTTVKRKEAREKNKNNYFN >gi|237663595|gb|GG668923.1| GENE 270 221494 - 222333 677 279 aa, chain + ## HITS:1 COG:no KEGG:SPs0445 NR:ns ## KEGG: SPs0445 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_SSI1 # Pathway: not_defined # 1 279 1 280 280 251 47.0 3e-65 MDALITKDGVETRLSSIGLLVTDFQDSSPSVTTNKREVTNRSGYIFSGAVHKEKRIVVSG TFVVPNAYALEEKKDEINGLISNDEPFYITKLLPTASLYDFELPGQKTSDLNLLTIPHHA YKYRYKIIVENELSYTFVGFSAAGIRMKFSFEGKTAELPFGETIPKTVLVSTSIDYAGTA KCSQLEWPWIVKLTANQSQDGSFFLKIGDRTFTYQTQTALENGDILLLKGVEVTLNGLNV NDKTNYEHFILVPANTNKIGIQTNFKGTIQLLNFVELYK >gi|237663595|gb|GG668923.1| GENE 271 222356 - 225280 2283 974 aa, chain + ## HITS:1 COG:no KEGG:SEQ_2046 NR:ns ## KEGG: SEQ_2046 # Name: not_defined # Def: phage protein # Organism: S.equi_equi # Pathway: not_defined # 1 582 2 623 660 390 37.0 1e-106 MNFIDEKGRLYSAIFECKKTKGVNGEKSLSGTIYTNDQLLHGIGRGWRIVFEGETYCLTY LNPIDEGTRIVVEFDAVHEFFFDMQKSVVHRLLNGSNTAERYLQHIFKGSGYEYRLEVNI PAFKKENFGLKNRLTLFKDFVSSTGVEFSINGRVVRILDKVGTNLSTIVKKGFNLNELHI EKDTGSFITYMKGYGAFKDPENPSQGRLEVEYLSPLSKIYGKLEGDPVVDERYTQVEHLL SRIKKEVDSSYGVSVDIDMEDLTKAGYNYDQPHEGDYIMAINKDLGFEQKVRILSYTTSY DTEGQIIDHDISCGSLNLMDQTRISDASWKNQIENSIEQAKSIANFALISADGKAITYYG LSIPTGNKFHKGDIWYKEIGEEKVLYIWNGTEWWPLVDKSVLEETKRLAEQAKLAGEDSK RTGEEIKRKSLEMNQEFQRYETDLIALKKENILREQQFNSITYEILKDKEEIQRHKNEIN STFNELYTQLDQTFTQFSAQDMKTETLVQQTQVNIEQLKTTTGQLEENYISLMKTKADLE EQVSLVKRSSEEMTTQFGTFKQTMVGQLETISELQQDASTIKKTISQLKTDSSGTKAQIS QLEQTQNQFKQTILDQITGYHSEQQQLANRIALMVQKGEVIARLNIEAGKTLIQNKKIFL DADTVYFSGKAFIPMATIKDLLVGSAEIRDLAVTTGKIANASIDTAKIKDLAVSNAKLGN ISADKITFGELNGAKARITNIDAANISNGFLDNQRIRSNSITADKLAVNAIQVGFNNYSQ NLKISPYNLSFYNTNRLSGRITSEGMEFWYGTREIGRIGENAKIGNENIRGVTMNLESTG DYIAWSYRKTKNDDAFTSMLMLDPRGKFTGKAGILMDVDVYLSRVKPNYTNAREFLRFGT IQYSNSYYSSLLNDSGKSGVMFGGAWLYLLHDNKVIPVEDIRKVVYALKGLGRVSIPTSI ARDGTVNQWKTITL >gi|237663595|gb|GG668923.1| GENE 272 225292 - 225612 462 106 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519651|ref|ZP_03949700.1| ## NR: gi|227519651|ref|ZP_03949700.1| hypothetical protein HMPREF0348_2634 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2634 [Enterococcus faecalis TX0104] # 1 106 12 117 117 134 100.0 3e-30 MELTVLQLLNLEEGLIELAEKEMHISTSLKLNRALTEIGTVTHCIRETAQPILKKEECLR EKELQELYKQEMNVELPTITINELAEVKVSAKLLHKIQPILEEVEE >gi|237663595|gb|GG668923.1| GENE 273 225615 - 225884 440 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519652|ref|ZP_03949701.1| ## NR: gi|227519652|ref|ZP_03949701.1| hypothetical protein HMPREF0348_2635 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2635 [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis TX1341] # 1 89 1 89 89 105 100.0 1e-21 MALEVTKSVNLSGQSIIDEKTVVYLSASVSTESVGNTNISQTIQDAKKYRENRTQCRKDI QSFQDKVYEVEDQLATESTKEEMEEVEEL >gi|237663595|gb|GG668923.1| GENE 274 225925 - 226155 294 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519653|ref|ZP_03949702.1| ## NR: gi|227519653|ref|ZP_03949702.1| hypothetical protein HMPREF0348_2636 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2636 [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis TX1341] # 1 76 1 76 76 128 100.0 2e-28 MNLFGLSITEFIAVLGLIGSILFALMKFHHVFSKLEESLQELKDAVNRLNNHEIRIARLE EQNKTIFKSIGGRKHE >gi|237663595|gb|GG668923.1| GENE 275 226148 - 226387 302 79 aa, chain + ## HITS:1 COG:lin1295 KEGG:ns NR:ns ## COG: lin1295 COG5546 # Protein_GI_number: 16800363 # Func_class: S Function unknown # Function: Small integral membrane protein # Organism: Listeria innocua # 3 75 5 74 87 68 49.0 3e-12 MNKINWKVRFQSKVFVISLLGLIFLLVQQILSIFGIRWDYTILNEQLTQIINTVFLLLAL IGVVKDPTTEGLLDSPIEN >gi|237663595|gb|GG668923.1| GENE 276 226409 - 227152 791 247 aa, chain + ## HITS:1 COG:no KEGG:SH2336 NR:ns ## KEGG: SH2336 # Name: not_defined # Def: hypothetical protein # Organism: S.haemolyticus # Pathway: not_defined # 6 142 15 151 647 88 36.0 3e-16 MTKKDEVINYVNSLIGKQVDMDGSYGSQCMDLTVHVMNKFFHWWPIGDAIALTTQAIPTG FQRLRVYQAKDIQAGDVMIWGLGAYAQYGHTAIATENGKSDGTFVSVDQNWVNASLEVGS AAQPIKHTMDGVWGVIRPNYSSSHSVVKRSIQSTQNTTQGRETTMYCLYQRPINPKTGAL EWNGSHWATFFCNGVNCRRLYHPDEVKVIKDVYRKNNGKEIPEYTQKEWNKNAPWYNRLE TVCPVVK >gi|237663595|gb|GG668923.1| GENE 277 228205 - 228738 364 177 aa, chain + ## HITS:1 COG:no KEGG:lmo2277 NR:ns ## KEGG: lmo2277 # Name: not_defined # Def: hypothetical protein # Organism: L.monocytogenes # Pathway: not_defined # 4 170 11 177 183 63 27.0 2e-09 MPKDLQKTYNLYLSNLDGKIAVITTPFVKLDCFYIKFDILQLPHLLGLHKIYNDSPKIIC QKLKNEAITYKHLQRHRNFGLIKDRVELFEFILEIFLEGYNDSVIYVSEADRFGSSMKLD IAFSHPHKNKTLTLGLREISNCVYTPVTFYVSKSNRPIFPKSKRAKILTLEMIAFNL >gi|237663595|gb|GG668923.1| GENE 278 228933 - 229139 195 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519657|ref|ZP_03949706.1| ## NR: gi|227519657|ref|ZP_03949706.1| hypothetical protein HMPREF0348_2640 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2640 [Enterococcus faecalis TX0104] # 1 68 1 68 68 110 100.0 5e-23 MKINSTEISLINELLEEYFYHHPQLQEVLYDDEGVPYEYKNGYIQYNSYGPKKVREINQL LSKLKSLT >gi|237663595|gb|GG668923.1| GENE 279 229106 - 230074 310 322 aa, chain - ## HITS:1 COG:no KEGG:BPUM_0553 NR:ns ## KEGG: BPUM_0553 # Name: not_defined # Def: hypothetical protein # Organism: B.pumilus # Pathway: not_defined # 88 314 86 315 321 137 36.0 4e-31 MLELEKRIAELDPFMTSLFVDFLYGRTLFKEFEPHSDDILLFAKLNYKYQTFLIGTNEEH EDIFFWKNNYVKIWCIGIGSPEIGHNDLLFFASCADTDKIKIVDCVEATTTPTFYKLDAV GKIKFLIAQKCIPDISDTIIKNSIVNSPSVEFFIKKWTANEKKTIDTLISTPASLTDFNK MTLRAKRYNFEEMLQTINNKQFEIEFDECLYCYNNQKWFVCAAGLGSILEHLLYLILEKN KMIDSNFPDDATAKIYIEYMSRKPISIKKRERTNLKTLFLIRNSVSHYNQGFTSKQQCAF LMDGIKDVFNNYYVKDFNLDNN >gi|237663595|gb|GG668923.1| GENE 280 230583 - 231089 453 168 aa, chain + ## HITS:1 COG:lin0860 KEGG:ns NR:ns ## COG: lin0860 COG4708 # Protein_GI_number: 16799934 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 10 168 2 161 162 100 41.0 1e-21 MQNSFQANRKLRTVLANGIIMGLYIVLSLLVRPVSSGMIQFRISESLNHLVVFNRKLMWG VLGGVIFFNLFFGFGVMDALFGGAQTLFALSLTAFLQKKVPSIPVRMCLNSLFFTVSMFF IAFMLVPSGGQAFWTTYGWLALSEAIIMTISAPIMYFINKSLKFETRI >gi|237663595|gb|GG668923.1| GENE 281 231327 - 232532 1112 401 aa, chain + ## HITS:1 COG:SPy1205 KEGG:ns NR:ns ## COG: SPy1205 COG2348 # Protein_GI_number: 15675170 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Streptococcus pyogenes M1 GAS # 5 401 9 404 407 319 43.0 5e-87 MYTFKIGIPAEVHDTFVKNHPLCNLLQSSSWAKVKDNWGSEIVGVYEKDTLVASSLVLIK PLPAGFTMLYTPRGPVMDYTNERLVNYFMAELKKFGKKKRALFIKMDPAVHYQDFHLGEE HQPHAEATSIIETLKKAGAKYQGLTMDMGATIQPRFQANIYREDFSEEQLSKSTKKMIKT AEKKGVVVQQGHVDFVDEFEKVIQSTMERQHISLRNSDYFKKLLNIYPEDSFIMLAQVNL KERLDSTQQRYDKNQKDLSNLKENQVKKRHNLEELDASLTRELKELEENIAEAGEIVTVA GALAVTFGPTSEILYAGLDDRYKRYMPTYVTWRDAIEECFDRGCESCNMGGLEGSLNDGL IKFKANFNPTINEFIGEFDLPVNKLLFKASEYAYKLRKQKK >gi|237663595|gb|GG668923.1| GENE 282 232588 - 233223 678 211 aa, chain - ## HITS:1 COG:CAC0331 KEGG:ns NR:ns ## COG: CAC0331 COG4684 # Protein_GI_number: 15893623 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 205 6 192 192 89 33.0 6e-18 MNNTKKFTLTAMFLAILLLLALTPLGFITLGPLNSTTMHIPVIIGSIVLGPKIGSMLGGT FGIISLIKNTTAPTPLSFVFSPFIPVIGTDHGSWKALLIVLIPRILIGVVPYFAYKWLNK LTKEKAQPVSLFVAGVLGSATNTILVMNMIYFLFNSAYAEIIGKAGTAVYLAIIATIFSS GVPEALVAGVAASAIASVLLRLMKRNATQKL >gi|237663595|gb|GG668923.1| GENE 283 233227 - 233781 573 184 aa, chain - ## HITS:1 COG:SPy1222 KEGG:ns NR:ns ## COG: SPy1222 COG0452 # Protein_GI_number: 15675186 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Streptococcus pyogenes M1 GAS # 2 177 3 178 181 209 65.0 3e-54 MKTILLGVSGSISAYKAADITSQLAKLGYNVEILMTKSSTAFITPLTLQSLSKNPVHTDV MMEIDPSKINHIELAKKADLFLVAPASANTIGKLAHGIADDLLSTVALALYPETPKIIAP AMNTYMYQNPIVQRNIGILKEVGYQEIIPREALLACGDYGRGALATVEDILQTVMKILAS DNKE >gi|237663595|gb|GG668923.1| GENE 284 233778 - 234551 962 257 aa, chain - ## HITS:1 COG:SPy1221 KEGG:ns NR:ns ## COG: SPy1221 COG0452 # Protein_GI_number: 15675185 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Streptococcus pyogenes M1 GAS # 1 251 1 226 228 152 39.0 4e-37 MDVLVTAGGTSEPIDNVRSITNHSSGGLGKAIAESFLAAGHTVTYVTTKHALRPTQQLDL SIKEIETTVELATTLEQLFAEKQFDAIVHAMAVSDFTTETAQTEEQFIDSFAQQLSEQTL PKTKEALVTIVQNTLNQIADIPQTATKISSDTDRLLIFLKKNPKVIQMIRDKQPQTVLVG FKLLVDVSQAELVQVAQAALAKNRCDFVLANDLMNVHETEHEGLLINETGIVQEACSKQG IGSMIVKNVEKKWREQQ >gi|237663595|gb|GG668923.1| GENE 285 234567 - 235559 1444 330 aa, chain - ## HITS:1 COG:SAP008 KEGG:ns NR:ns ## COG: SAP008 COG0604 # Protein_GI_number: 16119208 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Staphylococcus aureus N315 # 4 329 2 323 323 314 46.0 1e-85 MNSFQAFTLREQDTSVIGQLETITLDDLSEGTVVIKAAYSSVNFKDSLASKKDGGVIRNY PMIPGIDVSGTVVTSEDPRFKEGDKVIVTGYQLGVTHTGGYSEYVRVPGDWVVPLPEKMS LKEAMIFGTAGFTAGLSVTALEDDGLRDDKEAPIIVTGATGGVATLSIAMLHQLGYTSIT ALTRKPDSFELLKELGVSECLLVEDFLATPVKALMKQRFAFAIDTTGGEITSAVLPQLRY DGRSAICGRAAGITLETTVLPFILRGVHLLGIDSVNVGMDKRKIVWQRLATDLDITEKAV YQEITLEELPPVFEALQAGQHIGRTIVRIS >gi|237663595|gb|GG668923.1| GENE 286 235823 - 236365 655 180 aa, chain + ## HITS:1 COG:lin0796 KEGG:ns NR:ns ## COG: lin0796 COG1396 # Protein_GI_number: 16799870 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 1 180 1 180 180 205 58.0 3e-53 MEIGEKLRNLRIQKNLTQEELGERTDLSKGYISQLERDLSSPSMETFFSILEVLGVTPEQ FFSQQPLEQKIVYNEEESTLYYDEEHGYELKWLIPASNEKEMEPVIITFDKNGEYKTFEP SLSETFIYVIDGSIRLTLGEATYIAKKGQTMYYQATEPHQISNNGRGKSRALIVATESYL >gi|237663595|gb|GG668923.1| GENE 287 236391 - 237476 1356 361 aa, chain + ## HITS:1 COG:lin0797 KEGG:ns NR:ns ## COG: lin0797 COG3842 # Protein_GI_number: 16799871 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Listeria innocua # 1 361 1 362 364 536 75.0 1e-152 MRNHVISFENVVKQFDDEPVLKNVSFEIEEGKFYTLLGPSGCGKTTILRIIAGFNDVTSG DVYFDGKRINDVPANKRQVNTVFQDYALFPHMNVFDNVAFGLKIKKLSKAEIEKKVKEAL RLVQLPGYETREISEMSGGQRQRVAIARAIVNEPKVLLLDEPLSALDLKLRTAMQYELRD LQQRLGITFIFVTHDQEEALAMSDEIFVMNKGHIVQSGTPVDIYDEPINHFVADFVGESN IVDGVMLEDNLVSFVGKKFECVDGGMRKNEPVEVVLRPEDLTITTLEKGKLTVTVDTQLF RGVHYEIICFDEQGNEWMVHSTRKAKEGAQVGLSFEPEDIHVMRFNESEEDFDARLESYD E >gi|237663595|gb|GG668923.1| GENE 288 237495 - 238301 848 268 aa, chain + ## HITS:1 COG:lin0798 KEGG:ns NR:ns ## COG: lin0798 COG1176 # Protein_GI_number: 16799872 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Listeria innocua # 2 264 3 264 269 347 73.0 1e-95 MKTMRRIYSIPYVMWLLLFVIAPVLMIIYQSFFDMNGQFTLANYQTYFTSGTYLSMTINS VWYAFLITIFTLLVSYPTAYFLTKLKHKQLWLMLVILPTWVNLLLKAYAFIGIFSIHGSI NQFMSFMGLGTHQILFTDFSFLFVATYIEIPFMIMPIFNALEEMNPSLISASRDLGASSA ETFRRVIFPLSLNGVKSGVQAVFIPSLSLFMLTRLIGGNRVITLGTAIEEHFLVTQNWGM GSTIGVILIVAMFIVMLLTGEKKKGRGK >gi|237663595|gb|GG668923.1| GENE 289 238301 - 239137 821 278 aa, chain + ## HITS:1 COG:lin0799 KEGG:ns NR:ns ## COG: lin0799 COG1177 # Protein_GI_number: 16799873 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Listeria innocua # 4 265 2 262 268 315 68.0 9e-86 MQKKKFKWSYVYLFVVFALLYAPIFYLIFYSFNDTQTMNQFTGFTLDNYRNVFEDTRLLT IVLNTFLLAFLSALIATIIGTFGAMGIYYTKRRKNRNTLLSFNNILLVSPDVIIGASFLI FFTAVGFISLGFTSVLLSHIAFSIPIVVLMVLPKLQEMNDSMVDAARDLGANNVQVIKNI ILPFLAPGIIAGYFMAFTYSLDDFAVTFFVTGNGFSTLSVEIYSRARQGISLEINALSAL VFLFSMILVVGYYFISKDNTPKRLKKMRREQSEVAKLK >gi|237663595|gb|GG668923.1| GENE 290 239134 - 240207 1297 357 aa, chain + ## HITS:1 COG:SP1386 KEGG:ns NR:ns ## COG: SP1386 COG0687 # Protein_GI_number: 15901240 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Streptococcus pneumoniae TIGR4 # 1 357 1 356 356 466 64.0 1e-131 MKKLQSLFIGIIAIIVILFFGVRQLEKASGMAGADTLTIYNWGDYIDPALIKKFEKETGY KVNYETFDSNEAMYTKIQQGGTAYDIAIPSEYMIQKMMKAKMLLPLDYSKLKGLENIDAR FLDQSFDPKNKFSVPYFWGTLGIIYNDKFIDGRQIQHWDDLWRPELKNNVMLIDGAREVL GLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVKAIVADEIKMYMANEESAVAVTFSGEA AEMLENNEHLHYVIPSEGSNLWFDNIVMPKTAKNKEGAYAFMNFMLRPENAAQNAEYIGY STPNKEAKKLLPKEVAEDKQFYPDDETIKHLEVYQDLGQEYLGIYNDLFLEFKMYRK >gi|237663595|gb|GG668923.1| GENE 291 240357 - 241040 563 227 aa, chain + ## HITS:1 COG:no KEGG:EF2648 NR:ns ## KEGG: EF2648 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 227 1 227 227 392 97.0 1e-108 MKRKTIRILLISSGLILILLVGYRLYLEYQTDIQLFLNPKASKTQLLERIRSHGFSAALW LVFLTVIMCAVPGIPTSVIGVIAGLSFGPFSGTLINVLGNSLGNLVAIFLMHHIKFLDKK TETNHWVQSIRRMKHPKIGIMVGYMIPIIPSSVINFAADTMQLSLKNLIAAIVVGVIPSS ILYACGGEALFHGYNKTAVLLIVSVLLFVGLVVIIEKDRKRFQKTVL >gi|237663595|gb|GG668923.1| GENE 292 241149 - 242441 1320 430 aa, chain + ## HITS:1 COG:CAC2835 KEGG:ns NR:ns ## COG: CAC2835 COG2610 # Protein_GI_number: 15896090 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Clostridium acetobutylicum # 6 375 4 374 384 313 58.0 4e-85 MPDITISWVAAILGLVVAIVLILKKFNPVYSLFFGAIVGCLIGGASLSDTVAVLLNGTQS IMGTAIRVLAAGMLAGVMMESGAAESIANAIVQKLGEKKAILSLALSTMVITAVGVFIPV AVLIVAPIALSVGKSTGISKLSLLIALSGGGKAGNIISPNPNTIAAANGFDLPLSDVMIA GFIPAVFGLITAVVLANIMRSKGSMVKETDLVEEQTKELLPLKKALIAPVLAIVLLLLNP IGAVLNISFIKSLNIDALYILPFASVVGTIAIGQTKQLAFYASSGLKRVTDTVLILIGAG AIAGLISVSDLSTQIVHLISVMGISGTFLAPISGILMGLAVGSTSTAVILATGSFGPAIL DMGTSSLSAAVMVHTGATVIDSVPQGNYFHITAQSMNMTIKERIRVIPYEMCVGGVMTIV ATILYGFILN >gi|237663595|gb|GG668923.1| GENE 293 242463 - 243611 1476 382 aa, chain + ## HITS:1 COG:L79277 KEGG:ns NR:ns ## COG: L79277 COG1929 # Protein_GI_number: 15672838 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Lactococcus lactis # 1 378 1 378 385 428 62.0 1e-120 MTKKFVLAPDSFKESMSAKEACLAMEKGILAVFKDADIQHVPMADGGEGTVDSLVDATGG TRVPVRVAGPLPDQIVETYYGLLGDQETVVIEMAKANGIELVKAEERNPLITSTYGTGEM IQHALNHGAKKIIIGIGGSVTNDGGAGMIQALGARLLDKEGQELTRGGGALDKLAQIDLT QFDQRIFATEVLVASDVNNPLTGPTGASHVFGPQKGATEEMVAQLDKNLAHYAAIIKKEI GIDVEMMPGAGAAGGLGAGLLAFTKAQLRPGIDIVVEVNQLEEKIKAADYVFTGEGGMDF QTKFGKAPYGVSRLAKKYQKPVFACAGYIGKDVDVLYEEGMTAIFGILAKAEPLEAALKN GPVNLERTVENIALTLQLVPCD >gi|237663595|gb|GG668923.1| GENE 294 243753 - 244766 851 337 aa, chain + ## HITS:1 COG:CAC2833 KEGG:ns NR:ns ## COG: CAC2833 COG3835 # Protein_GI_number: 15896088 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sugar diacid utilization regulator # Organism: Clostridium acetobutylicum # 2 327 1 337 344 137 31.0 4e-32 MLKLDKIQANKIVEKLMADIPYNINIMDERGKIIASGDSARIGERHRGAERAINERKNIE IYKDTSLEKKGTNEPIILNDHILGVVGISGEPDEVRKFTKLVRSIVLLLTEELNTQQERE KKKKQKNQFIQHLMHVDSAYSEALKLEALELYNLQLDDQNHCVLTKDKRLLSSYYPGHEI FEWENCYLVITSEPPQITKPVTEYLVISSEKATIQQMVQEAQNTYLLLSFLQLEKAKFYQ AEDFFIQGIFNFPFHIELDFFETIQTIYDEYYETVIFFANHNLNINETSQVLHIHRNTLN YRLKRIHELTGMDPKVWQDFWKLFYYFAYCFKERFEK >gi|237663595|gb|GG668923.1| GENE 295 244889 - 245791 1050 300 aa, chain + ## HITS:1 COG:lin0768 KEGG:ns NR:ns ## COG: lin0768 COG1597 # Protein_GI_number: 16799842 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Listeria innocua # 1 300 1 299 309 266 46.0 3e-71 MKKAVLIVNPSSGGEKAKEFETLAEEKLKQLFDEVVVKQTEKGGDAEQFAREAAESHFDS VFVMGGDGTVNEGISGLAEQAYRPKFGFFPLGTVNDLARALNLPMDPEEAIQQLDLEKTS ALDVGKINDDYFMNVVAIGTIPESINDVDVEQKTKLGKLAYFISGAKHLANAQTYPFHLS LDQKEQTIESSTVLVGLTNSIGGFETLLPEAQVDDGKLHLVYLKDQSLWDAVKAVPDLLK GVDQSTDNLAYLTFKEGTISLENQEELTTNVDGDEGAALPITLKILPKHLTVYCGEEQTK >gi|237663595|gb|GG668923.1| GENE 296 245935 - 246645 791 236 aa, chain + ## HITS:1 COG:L62955 KEGG:ns NR:ns ## COG: L62955 COG3597 # Protein_GI_number: 15672246 # Func_class: S Function unknown # Function: Uncharacterized protein/domain associated with GTPases # Organism: Lactococcus lactis # 32 236 12 216 217 238 58.0 6e-63 MRRKKHKNKKKQELFEEIEKQELAEQETKQLNEEIEDPEFRSFFQDVLKKFPQKTSMAIM NAFATSKGKAEQLVTNSQTQLDKVFDEFLAGVSPDVKKKSHQTIHFAALSAAIIGFSPIP FSDAFLLVPVQLTMMSRLHKIFGQSWSESLGKSLTKELVVVSLGKSAVGNILKVIPVVGT VTGGMVNASVAVAITEALGWVTVKMLNDGVDIFDDVMSFKGQFSTLFKAIQNAKKK >gi|237663595|gb|GG668923.1| GENE 297 246930 - 248639 1993 569 aa, chain - ## HITS:1 COG:SPy0184_1 KEGG:ns NR:ns ## COG: SPy0184_1 COG4176 # Protein_GI_number: 15674389 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 5 305 8 306 306 369 64.0 1e-101 MNKYQLPVASWVESFTDWLTSTFAGLFSFLQTIGQSVMDNITALLTAVPPLVLIVLLTIA AFFISNKKIGLSLFTFIGLMFIYNQNLWNDLMSTVTLVLLSSVISIIIGVPLGILMAKSE KAKSIITPILDFMQTMPGFVYLIPAVAFFGIGMVPGVFASVIFALPPTVRFTNLGIRQVP NELVEAADSYGSTGWQKLFKLELPLAKNTIMAGVNQTTMLALSMVVIASMIGAPGLGRGV LSALQRAQVGNGFVNGVALVILAIIIDRFTQHLNNKKAAPKAAGATSKKKKYGIIATVVV IVAGLVGASIFTTTNDKQISLSYVEWDTEVASTHVVAEVLKDMGYDVKTTPLDNAIMWES VAKGETDAMVGAWLPGTHAEQYKQYKDKLDDLGENLKGAKLGIVVPSYMDVDSIEDLSDQ AGKKITGIEPGAGVVAAAEKTKEAYPNLKDWSVETSSSGAMTVTLGQAIKNNEDIVITGW SPHWMFAKYDLKYLADPKGTMGGEEAIHTMARQGLKEDQPEAYKVLDNFHWTTKDMESVM LEINEGKDPQEAARDWVDSHKDQVAEWKK >gi|237663595|gb|GG668923.1| GENE 298 248632 - 249822 1455 396 aa, chain - ## HITS:1 COG:L74195 KEGG:ns NR:ns ## COG: L74195 COG4175 # Protein_GI_number: 15673434 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, ATPase component # Organism: Lactococcus lactis # 1 389 1 391 408 550 74.0 1e-156 MPKVKVNHLTKIFGKKTKPALEMIRANKSKTEILEKTGATVGVYDVNFEVEEGEIFVIMG LSGSGKSTLIRLLNRLIEPTSGNIYIDGQDISSLDKEGLREVRRNKMSMVFQNFGLFPHR TILENTEYGLEIRGVPKEERQAKAEKALENSSLIAFKDQLPSQLSGGMQQRVGLARALAN DPEILLMDEAFSALDPLIRREMQDELLDLQENVKKTIIFITHDLNEALRIGDRIALMKDG QIMQIGTGEEILTNPANEYVRTFVEDVDRSKVLTAQNIMVPALTTNIEIDGPTVALKRMR QEEVSMLLAVDKKRQLKGVVRAEKALEARKNGTSLVECVDPEIQTIDKDMLVNDIFPLIY DAQTPLAVTDNGKLLGVVIRGSVLEALAETEVNEHE >gi|237663595|gb|GG668923.1| GENE 299 250023 - 250655 585 210 aa, chain - ## HITS:1 COG:SPy1259_1 KEGG:ns NR:ns ## COG: SPy1259_1 COG2188 # Protein_GI_number: 15675218 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 149 1 149 149 109 36.0 4e-24 MASKKISLTKPKYQQIAVDVAEKIAEGKLHVGDKIHARSTLANQYQVSPETARKAIIVLV DLEIVKAKHGSGFYVASKEKAQDFVTQYQDVQTIAEIKEELLDSVAKQKEELTHFSSILD TLVEQTKRFDSFNPMNPYSLVLTEEAAYLEATISEMNFWQNTSATIIAIKHKEELLVSPG PYAKISLNDTLYFVGHDESTLQRVQNFFYP >gi|237663595|gb|GG668923.1| GENE 300 250670 - 252616 1936 648 aa, chain - ## HITS:1 COG:lin2179 KEGG:ns NR:ns ## COG: lin2179 COG0488 # Protein_GI_number: 16801244 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Listeria innocua # 1 644 1 650 650 669 57.0 0 MILLQANQVARHFGSETLFENIHLEIATKSRIALVGRNGAGKSTFLKIIAGIDAPDSGTI AKNKTATLGYLAQNTGLESDKTVWEEMTKAFADILEMEQRMRELETKISEMEPTTSVYEG ILKEYDQLQHTFSEKNGYGYENEIRSVLHGFGFDESFYTKDIQTLSGGQKTRLALARMLL QKPDILILDEPTNHLDIETLSWLESYLPSYAGALLIVSHDRYFLDKVVNEVYELSRKKMT HYKGNYSKYLELKAEQLASEWKAYEKQQEEINKLEDFVAKNLVRASTTKRAQSRRKVLEK MDRLDRPQGDEKSAHFLFDSEKVSGNVVLQVEDAAIGYDQEHVLSEPIHLDIRRKEAIAL VGPNGIGKSTLLKSIIDRIPFIKGSKTFGTNVSVGYYDQEQANLHGNKTVLAELWDEHPT TPEKEIRSILGGFLFSGDDVEKTIPLLSGGEKARVALAKLAMDRDNFLILDEPTNHLDID NKEVLENALIDYEGTILFVSHDRYFINRIATKVVELSEKGSKLYLGDYDYYLEKKQEEEE IAALLANEEAAKKTEPVTAKNTFYQNKEQQKLLRTLQRKITQVEENLAQLDTTIAQLEAQ MSQPDILENHVELLALNQQLDDARQQQDELLEQWENFSLELEEMENNN >gi|237663595|gb|GG668923.1| GENE 301 252830 - 253480 821 216 aa, chain + ## HITS:1 COG:lin2178 KEGG:ns NR:ns ## COG: lin2178 COG2344 # Protein_GI_number: 16801243 # Func_class: R General function prediction only # Function: AT-rich DNA-binding protein # Organism: Listeria innocua # 6 207 8 209 215 246 60.0 2e-65 MKDQVIPKATARRLPLYYRYLRMLHDTGKNKVSSTELSEAVQVDSATIRRDFSYFGELGK RGYGYDVENLMNFFAKTLNEDELTNVALIGVGNLGSALLKYKFHQSNSIRVSCAFDVNED IVGRIVDGIPVYPMEDMMEQIRVQQIEVAILTIPARKAQEVVNKLAEAGVKGILNFTAAR LVAPPEVLIQNVDLTNELQTLIYFLHHDNELIDEEE >gi|237663595|gb|GG668923.1| GENE 302 253523 - 254176 594 217 aa, chain - ## HITS:1 COG:BS_ydiL KEGG:ns NR:ns ## COG: BS_ydiL COG1266 # Protein_GI_number: 16077668 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Bacillus subtilis # 3 209 1 221 244 109 38.0 4e-24 MTLRKSSLFILVTYIIAFFGPLLFSGISPNAAINVTTALYIIGALVMIGIFLKTTEPSPL EETATLKSPIFIFLLGVSGIFIAMLIQGVTFAIEVAITGEQATSQNTQAIVAVILANPLF ILATTIGGPIMEEFVFRYAFIHLIQPFTNFWIAATVSSAIFSLAHADGHFFVYFFMGFFF ALLYKQTGKIWTSIIAHCGMNTIVIIVQLLLHNGAIQ >gi|237663595|gb|GG668923.1| GENE 303 254195 - 254371 220 58 aa, chain - ## HITS:1 COG:no KEGG:EF2636 NR:ns ## KEGG: EF2636 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 58 1 58 58 76 100.0 4e-13 MKQRLLTALIATFVYFVIANLGNLVFSVTEGIVSTLWESLFFFLFVFLLLGYRNNRKK >gi|237663595|gb|GG668923.1| GENE 304 254604 - 254888 418 94 aa, chain + ## HITS:1 COG:lin2175 KEGG:ns NR:ns ## COG: lin2175 COG0234 # Protein_GI_number: 16801240 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Listeria innocua # 1 91 1 91 94 107 68.0 7e-24 MLKPLGDRVVIRVAKEEEKTVGGIVLASVAKEKPQTGEVIAVGEGRVLENGTKVPMEVKI GDTVMFEKYSGTEVKYEGVEYLIVSAKDIIATVE >gi|237663595|gb|GG668923.1| GENE 305 254946 - 256571 1605 541 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 541 3 547 547 622 59 1e-177 MAKEIKFAEDARAAMLRGVDVLADTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIE LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPLGIRRGIE LATKTAVEELHNISSVVDSKEAIAQVAAVSSGSEKVGQLIADAMEKVGNDGVITIEESKG IETELDVVEGMQFDRGYLSQYMVTDNDKMEAVLENPYILITDKKISNIQDILPLLEQILQ QSRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVIT DDLGLELKDTTIENLGNASKVVVDKDNTTIVEGAGSKEAIDARVHLIKNQIGETTSDFDR EKLQERLAKLAGGVAVVKVGAATETELKELKLRIEDALNATRAAVEEGMVSGGGTALVNV IGKVAALEAEGDVATGIKIVVRALEEPIRQIAENAGYEGSVIVDKLKNVDLGIGFNAANG EWVNMVEAGIVDPTKVTRSALQNAASVSALLLTTEAVVADKPEPAAPAPMMDPSMGMGGM M >gi|237663595|gb|GG668923.1| GENE 306 256876 - 257595 702 239 aa, chain + ## HITS:1 COG:SA0017 KEGG:ns NR:ns ## COG: SA0017 COG0745 # Protein_GI_number: 15925723 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Staphylococcus aureus N315 # 63 237 65 231 235 78 32.0 1e-14 MEKYTIGVVPLTIETKEYCQNWFVSNQVECQIIQGTNILLHLHHIDGLVIEVTDHQQVNT CCELLMTIRKQSDLPIWLFSRTEAISKVNRIIYLQLGADGVFDHSYDRQECVLSMSNLLQ RVKRRFYPKLVSANEEQTVTKNLSERLYLIAPNLSVCLGNGEEILLTKLEFFTIEYLYKH AGQTITYEELYKNVWKDTANERKYRVANVIFHLRKKIEQDVNKPQYIKTIRSKGYMLTV >gi|237663595|gb|GG668923.1| GENE 307 257619 - 258074 509 151 aa, chain + ## HITS:1 COG:no KEGG:EF2629 NR:ns ## KEGG: EF2629 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 134 1 134 236 132 93.0 5e-30 MWQFLTKNNEDEEYEKMPDFENEQSGKAQPKVTEEAIFDDEVVYAKEQAAKVKQVKQEVP TELSEESFSFAEKLEEENQIYQQSIKKLTEQLLMQTNEVEALQKQVVEKDVQLKDVKETL SDKEATITSLQKQLPKLTNKLQQFMKRWNNV >gi|237663595|gb|GG668923.1| GENE 308 258059 - 258205 98 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEQRLATLTRMKQVAREYQAYCEQMLTIKNESTGMYQQIEQLLAEIKR >gi|237663595|gb|GG668923.1| GENE 309 258222 - 259769 1345 515 aa, chain + ## HITS:1 COG:SPy0857 KEGG:ns NR:ns ## COG: SPy0857 COG1705 # Protein_GI_number: 15674890 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Streptococcus pyogenes M1 GAS # 186 354 42 204 235 150 53.0 5e-36 MKKRKARYLKLVCLGVLGTYAGASYYNSEPLIAQEETETSHESRQLVLEEKRADQVNQDQ GTLTSSTLNETVISSSEQQESSIQNDSGDHQENNVEPSESENSLPPQEKPIASTKPTESL QSEQPASEERKALTEKPPHNQEPQNSTLTEKTKEPLVHSEIDNSQEKEKQAGIQQQAEAN FVVQENTSTSEFIRKIGEEARVIGQRHDLYASVMIAQAILESGSGNSALAAPPNYNLFGI KGAYQGQSVSFSTQEDDGKGKMTTIHADFRQYPSYKESLTDYSKLIINGLAGNPTFYHGV LKANTTNYQQATKFLTGRYATDTYYDKKLNALIETYQLTEYDQEKKKPVVTNLAEEKKPS FDKEAVKEQLKKEAVIYEVSKGDSLATISQTFGVSATAILKQNLKTQEMFYIGQKITIPQ HTAATSLEPKEQALLQSLIISKSVTNALETAEQSNGTANDSKTESTEYYEVKRGETLAKI AKKTGYSLNALKQENDLTYSVLTEGQTIALPKLKD >gi|237663595|gb|GG668923.1| GENE 310 259988 - 260398 215 136 aa, chain + ## HITS:1 COG:lin2694 KEGG:ns NR:ns ## COG: lin2694 COG2246 # Protein_GI_number: 16801755 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 11 135 21 145 145 99 45.0 2e-21 MKELFRKYREVLAYLFFGGATTVVNLVVFFVCQNVLGLDYKISNAISWFLSVLFAFFTNK YWVFASKHESIAGFFKEMGLFYWYRILSFVADMGLMILLIDGIHFSSFWAKMITQVVVVI LNYFFSKFFIFKEKEV >gi|237663595|gb|GG668923.1| GENE 311 260476 - 261960 1421 494 aa, chain + ## HITS:1 COG:L107468 KEGG:ns NR:ns ## COG: L107468 COG1488 # Protein_GI_number: 15673082 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Lactococcus lactis # 1 483 6 487 495 771 76.0 0 MDYTYADDSLTLHTDMYQINMMQTYWELGRADLHAVFECYFREMPFNHGYAIFAGLERLV NYLENLTFTESDIAYLREVEEYPEDFLTYLANFEFKCTVRSALEGDLVFNNEPLIQIEGP LAQCQLVETALLNMVNFQTLIATKAARIKSVIGDDPLLEFGTRRAQELDAAIWGTRAAYI GGADATSNVRAGKIFGIPVSGTHAHSLVQSYGNDYEAFMAYAKTHRDCVFLVDTYDTLKA GVPSAIRVAREMGDKINFLGVRIDSGDMAYISKRVREQLDEAGFTEAKIYASNDLDENTI LNLKMQKSKIDVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIKLSSNAEKVTTP GKKQVWRITRKSDKKSEGDYVTLWNEDPRQEEEIYMFHPVHTFINKYVRDFEARPVLQDI FVEGKRVYELPTLDEIKQYAKENLDSLWEEYKRDLNPQKYPVDLSTDCWNHKMNLLEKVR KDVKHLTETVNKEA >gi|237663595|gb|GG668923.1| GENE 312 261963 - 262790 1171 275 aa, chain + ## HITS:1 COG:SP1420 KEGG:ns NR:ns ## COG: SP1420 COG0171 # Protein_GI_number: 15901273 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Streptococcus pneumoniae TIGR4 # 3 275 2 274 274 416 76.0 1e-116 MTTLQEKIIQELGVLPTIDPKEEVRKSIDFLKAYLTKHPFLKTFVLGISGGQDSTLAGRL AQLAMTEMREETGDMSYQFIAIRLPYGEQADEADAQAALAFIQPDVSLRVDIKPAVDAMV GSLENAGVQISDFNKGNMKARQRMITQYAVAGENAGAVIGTDHAAENVTAFFTKYGDGGA DILPLFRLNKRQGKALLKELGAPEALYLKIPTADLEDDKPLVADEVALGVTYDAIDDYLE GKKVSEADQQTIENWYKKGQHKRHLPITIFDDFWK >gi|237663595|gb|GG668923.1| GENE 313 263092 - 264897 1947 601 aa, chain + ## HITS:1 COG:L96595 KEGG:ns NR:ns ## COG: L96595 COG2217 # Protein_GI_number: 15672077 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 1 598 1 592 593 552 50.0 1e-157 MKHVTKLGITIITGVLALLFEFILHQPNWAYGIILITGSVMALMMFWEMIQTLREGKYGV DILAITAIVATLAVGEYWASLMILIMLTGGDSLEDYAAGKANQELKSLLDNSPQKAHRLN GENLEDVSVEEINVGDELVVKPGELVPVDGLVKTGTSTVDESSLTGESKPIEKNPGDELM SGSVNGDGSLKMVAEKTVADSQYQTIVNLVKESAARPAHFVRLADRYAVPFTLVAYLIAG VAWFVSKSPTRFAEVLVVASPCPLILSAPIALVAGMGRSSRHGVVIKSGTMVEKLASAKT IAFDKTGTITQGQLSVDQVQPINAEITAAELVGLAASVEQESSHILARSIVAYARKQDVP LKNITDLAEVSGAGVKAFVDGAEIRVGKKNFVTQESQATEKIDKTTIHISRNGTYLGRIT FTDTVRPEAKETMEKLHQLHLQRILMLTGDQESVAETIAAEVGITEVHGECLPQDKLTIL KELPKENHPVIMVGDGVNDAPSLAAVDVGIAMGAHGATAASETADVVILKDDLSKVSQAV EIAQDTMKIAKQSVLIGIFICVLLMLIASTGIIPALIGAMLQEVVDTVSILSALRARRIG K >gi|237663595|gb|GG668923.1| GENE 314 264989 - 265273 382 94 aa, chain + ## HITS:1 COG:L86826 KEGG:ns NR:ns ## COG: L86826 COG3592 # Protein_GI_number: 15672668 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 90 15 104 104 119 62.0 2e-27 MEGNQIDGQPVTEEQLLKEGYRKYTGEGIDIFYNKDICEHIGNCVRGNPEVFEVGRKPWI IPDNGSVENDMIVVDSCPSGALKYIRKAGNEYAN >gi|237663595|gb|GG668923.1| GENE 315 265263 - 265538 415 91 aa, chain + ## HITS:1 COG:lin0181 KEGG:ns NR:ns ## COG: lin0181 COG2388 # Protein_GI_number: 16799258 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Listeria innocua # 1 88 1 88 92 90 55.0 5e-19 MQIKEENNRFALYNDENQEIGEMTWSDAGESMMIIDHTFVDPTYRGQKLAEKLVLAGVEK ARKEHKKIIPLCPFAKKEFDTKPEYGDVLRK >gi|237663595|gb|GG668923.1| GENE 316 265706 - 265942 363 78 aa, chain + ## HITS:1 COG:L0338 KEGG:ns NR:ns ## COG: L0338 COG1314 # Protein_GI_number: 15672923 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Lactococcus lactis # 1 78 5 82 82 72 46.0 2e-13 MYNLILTLVIILSVLIVITVMMQPSKQNSAASAFTGGADKLFGKQKARGFEAVMQRSTAV LGAIWMILLFVLAFLSSK >gi|237663595|gb|GG668923.1| GENE 317 266097 - 266861 850 254 aa, chain + ## HITS:1 COG:BH3554 KEGG:ns NR:ns ## COG: BH3554 COG1647 # Protein_GI_number: 15616116 # Func_class: R General function prediction only # Function: Esterase/lipase # Organism: Bacillus halodurans # 4 252 2 248 248 166 34.0 4e-41 MAKKINLPKPLFSEKGKRAVLLLHAYSGSSNDVRMLSRRLEKENYTVYSPNFSGHGTLVP EDILDQTTEQWWQDTQEAVAFLRERGYQEIAIFGLSMGGIFSMHALTEQLTGLIGGGFFC SPIYPVENKVPENFVLYAENVMKIAEVPAEEQQSRLQSIKQRVKQQLGAIETIASQTADK LNKIHAPLFLAQAGKDEMIEPMGVYQTAQALTQARVTLQWYPNSGHVITVSGEHKQLEQD VVQFLATLPWNEEK >gi|237663595|gb|GG668923.1| GENE 318 266861 - 269230 1620 789 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 6 746 3 726 730 628 44 1e-178 MTKQTIKEQILHFMESQKKKSFSMEEIAQGLNLEKSSDFKILVQTIAQMEREKSVSFNKK GKVLLPMKDLLIEGTFRANERGFGFVTIDPEEPDVYIPKEATNFAMDGDTVLIDVIEHAD PFSDRGAEGKVKEIKERAVSQVVGEFVAYSEEEMAEMGLYGYMIPKDKKLNQYTVSIAPE GIKPVDGSIVIAEITYYPDQEYPTSMEGLVKQVIGHKNDPGMDILSIVVAHGIPTAFPDE VLAEADQVPETIAESDLVGRRDLRDQLIVTIDGEDAKDLDDAVTVQKLANGNFFLGVHIA DVSYYVTEGSQLDMEAYERGTSVYLTDRVVPMIPQRLSNGICSLNPHVPRLTMSCEMEIT PEGEVISHEIFQSVIQTTERMTYTAVNEILEEQKPETLERYKELVPMFKEMGELHHILEE MRMRRGAISFEDREAKVLVDENGHPQDILLRTRGVGERLIESFMLAANETVARHYHDLKL PFIYRIHEQPKEEKMQRFFDFAAVLGILVKGTKENISPKDLQKVLEQVENKPEEVVINTM LLRSMQQAKYSEDNYGHYGLAAEYYTHFTSPIRRYPDLIVHRLIRSYSQDQSEKNQEKWN EALPEIANHSSSMERRAVDAEREVDAMKKAEFMVDKVGETYDGIISSVTKFGIFVELPNT IEGLIHVNNLKQDYFHFIENHMALVGERTGMTLKIGQKVQIRVEKADPETREVDFELISA EEVAPVEGPKGRKKGKANSSTRSNNQRRNKKDESFDGKKKKNKKKGKGKKQPFYKEAMKQ KNKKGKKKK >gi|237663595|gb|GG668923.1| GENE 319 269243 - 269707 592 154 aa, chain + ## HITS:1 COG:lin2542 KEGG:ns NR:ns ## COG: lin2542 COG0691 # Protein_GI_number: 16801604 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Listeria innocua # 1 154 1 154 154 209 72.0 2e-54 MPKGEGKLIAQNRKARHDYSIIDTVEAGLVLQGTEIKSIRNGRINLKDGFARIRNGEAFL YNVHISPYEQGNIFNHDPLRTRKLLLHKKQINKLIGETKNTGITLVPLKVYIKDGYAKVL IGLAKGKKQYDKREDLKRKEVDRQISRTLKNNRR >gi|237663595|gb|GG668923.1| GENE 320 269786 - 269887 67 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNVNDSFFNRFGKQYHPALDWFMEKVFQPIFNT >gi|237663595|gb|GG668923.1| GENE 321 270010 - 270729 629 239 aa, chain + ## HITS:1 COG:lin2679 KEGG:ns NR:ns ## COG: lin2679 COG0356 # Protein_GI_number: 16801740 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Listeria innocua # 1 238 1 237 238 225 52.0 6e-59 MEEKKLLFNIGPIWFDGTIVLMVLLTCIIVFAFVYACTRNMKLRPKGKQTVIEWLVDFIR GIITDNLPRKEVSNFHLMAFTLFMFVLVSNILGLVTKIVVGDDLSVWKSPTADPIVTLTL AMMMIVLTHFFGMKRFGFKGYLVNSYLRPVGFLLPVKLMEEFTNLLTLGLRLYGNIFAGE VLLGLIAGTVASVGLWVIPLAIPLEMIWVAFSIFIGCIQAFIFVTLSMVYMSHKIETEE >gi|237663595|gb|GG668923.1| GENE 322 270778 - 270999 417 73 aa, chain + ## HITS:1 COG:SA1910 KEGG:ns NR:ns ## COG: SA1910 COG0636 # Protein_GI_number: 15927682 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Staphylococcus aureus N315 # 4 69 1 66 70 60 59.0 1e-09 MEGLNFIAAAIAIFGSAIGAAIGNGQVISKTIESMTRQPEMSGQLRTTMFIGVALIEAVP ILGVVVSLLLLFR >gi|237663595|gb|GG668923.1| GENE 323 271137 - 271667 736 176 aa, chain + ## HITS:1 COG:L11208 KEGG:ns NR:ns ## COG: L11208 COG0711 # Protein_GI_number: 15673750 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Lactococcus lactis # 10 171 7 168 168 123 46.0 2e-28 MLLTILVVGETAPSTTLGTMIVVSGAFLILMLLLKKYAWGAIVDILTQREEKIANDLDSA EQSRVAAAKMEKERQQQLLSSRSEAAEIIKNAKESGEQTRQKTLKETTAEVTRLREKART DISQEREEALSSVKNEVADLSLQIAAKILNKELTPDAHEALIDSYIESLGKANETR >gi|237663595|gb|GG668923.1| GENE 324 271654 - 272196 676 180 aa, chain + ## HITS:1 COG:BH3757 KEGG:ns NR:ns ## COG: BH3757 COG0712 # Protein_GI_number: 15616319 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Bacillus halodurans # 3 179 1 178 183 77 28.0 9e-15 MKLDKYTVGKRYGKALFELAVEKNQAEAIYQELLTLREVYHQVPGIGDILSDDRLEPYEK DSIMEKLVTGFSEMMQNFLRVVYEYRRMYDLLLMIDEYERRYDEHQGLILGSVTTAIPLS KEQHQAMEEKAAQLLGYEQAHLVNLIDPSIVGGVVIEANHQVIDGSIRKQLEHMQQKLLK >gi|237663595|gb|GG668923.1| GENE 325 272225 - 273781 2203 518 aa, chain + ## HITS:1 COG:SPy0758 KEGG:ns NR:ns ## COG: SPy0758 COG0056 # Protein_GI_number: 15674806 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 496 1 496 502 808 82.0 0 MAIKAEEISALIKEQIENYQQQLAVEEVGTVTYVGDGIARAHGLENAMSGELVEFSNGSY GMAQNLETNDVGIIILGDFETIREGDKVQRTGKIMEVPVGEALIGRVVNPLGQPLDGLGE IKTDKTRPVEATAPGVMQRQSVAEPMQTGLKAIDALVPIGRGQRELVIGDRKTGKTSIAI DTIINQKGQDVICIYVAIGQKESTVRNQVETLRKFGALDYTIVVTAGASQPAPLLYIAPY AGTAMGEEFMYNGKHVLIIFDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER AAKLSDELGGGSMTALPFVETQAGDISAYIPTNVISITDGQIFLESDLFYAGTRPAVDAG LSVSRVGGSAQIKAMKKVAGTLRLDLASYRELEAFTQFGSDLDAATQAKLNRGRRTVEIL KQKLHAPLPVEKQVLILYALTHGFLDSVSVDKILHFEQDLFDYFDGKHADLLETIRTTKD LPDTDALDAAITEFSEMFAAANNSGDSAKEALEKIDNA >gi|237663595|gb|GG668923.1| GENE 326 273797 - 274705 1073 302 aa, chain + ## HITS:1 COG:SP1509 KEGG:ns NR:ns ## COG: SP1509 COG0224 # Protein_GI_number: 15901356 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 302 1 292 292 353 64.0 3e-97 MGASLNEIKQRIASTKKTSQITKAMQMVSAAKLTKSEGASKSFQEYSSKIRSVVTHLVAA QLSELRETEQSSLSEGNYHVMLAQRPVKKTGYIVITSDKGLVGGYNSSILKQTMSMIQED HDSNKEYALIAIGGTGADFFKARGIDVSYELRGLTDQPTFEEVRKIVTTATTMYQNEVFD ELYVCYNHHVNSLTSQFRVEKMLPITDLDPSEATSYEQEYLLEPSPEAILDQLLPQYAES LIYGAIIDAKTAEHAAGMTAMKTATDNAQNIISDLTISYNRARQGAITQEITEIVAGAAA LE >gi|237663595|gb|GG668923.1| GENE 327 274780 - 276186 1891 468 aa, chain + ## HITS:1 COG:SP1508 KEGG:ns NR:ns ## COG: SP1508 COG0055 # Protein_GI_number: 15901355 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 468 1 468 468 796 87.0 0 MSSGKIVQVIGPVVDVEFSLDQSLPDINNALVVYKNGEAKQKVVLEVALELGDGVIRSIA MESTDGLQRGMEVIDTGKSISVPVGKDTLGRVFNVLGDTIDLEAPFPADAERSGIHKKAP AFDELSTSNEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS VFTGVGERTREGNDLYYEMKDSGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTKKGSITSI QAIYVPADDYTDPAPATAFAHLDATTNLERKLTEQGIYPAVDPLASSSSALAPEIVGEEH YEVATEVQHILQRYRELQDIIAILGMDELSDDEKVLVGRARRVQFFLSQNFNVAEQFTGQ PGSYVPVAETVRGFKEILEGKHDNLPEEAFRSVGKIEDAIEKAKQLNY >gi|237663595|gb|GG668923.1| GENE 328 276203 - 276622 639 139 aa, chain + ## HITS:1 COG:SPy0761 KEGG:ns NR:ns ## COG: SPy0761 COG0355 # Protein_GI_number: 15674809 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Streptococcus pyogenes M1 GAS # 1 137 1 137 138 149 60.0 1e-36 MDSLTVNVVTPNGLVYDHHAKIVVAKTTDGEIGILPKHAPIIVPLAIDEVRIKRTDSDTH VDWVAVNGGIMEVRDNVVSIIADSAERERDIDVPRAERAKQRAERLIEEAKAKDDRDQLR RATVALHRAINRINVSKHG >gi|237663595|gb|GG668923.1| GENE 329 276812 - 277048 176 78 aa, chain + ## HITS:1 COG:no KEGG:EF2606 NR:ns ## KEGG: EF2606 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 78 1 78 78 111 98.0 7e-24 MQYYGVDAIVRIVSHLMFIYISFWALQSLRIEQFFKTQFTPQIRMLMVFLAIAIGYTVSS FALELIALCRNLFIVYFP >gi|237663595|gb|GG668923.1| GENE 330 277151 - 278452 1733 433 aa, chain + ## HITS:1 COG:lin2670 KEGG:ns NR:ns ## COG: lin2670 COG0766 # Protein_GI_number: 16801731 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Listeria innocua # 1 425 1 422 430 526 70.0 1e-149 MEQIIVHGGNTKLEGTVKIEGAKNAVLPILAATLLAEEGVTTLKNVPILSDVFTMNQVIK HLNVAIDFDEDANEVTIDATQPLGIEANYEYVSKMRASIVVMGPLLARNGHAKVAMPGGC AIGKRPIDLHLKGFQALGAKIIQKNGYIEAIADELIGNTIYLDFPSVGATQNIMMAAVRA KGTTIIENVAREPEIVDLANILNKMGANVIGAGTETMRIEGVDKLHAVEHSIVQDRIEAG TFMVAAAMTEGNVLIEEAISEHNRPLISKLTEMGAIIEEEENGIRVIGPKHLKPTDVKTM PHPGFPTDMQAQMTAIQMFAEGTSIVTETVFENRYQHLEEMRRMNADLKIDGNIAVINGG NELQGAAVEATDLRAAAALILVGLRANGITRVSNLKYLDRGYYEFHKKLQKLGANVERVN DEKIEEKQATTVI >gi|237663595|gb|GG668923.1| GENE 331 278466 - 278642 310 58 aa, chain + ## HITS:1 COG:no KEGG:EF2604 NR:ns ## KEGG: EF2604 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 58 1 58 58 82 100.0 6e-15 MSSFRYILVTLLKILVVISLVIILFVVGTMIGYGLIGNGNPMDVFDEKIWTHIMNFFK >gi|237663595|gb|GG668923.1| GENE 332 278770 - 279138 437 122 aa, chain + ## HITS:1 COG:lin0546 KEGG:ns NR:ns ## COG: lin0546 COG3731 # Protein_GI_number: 16799621 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Listeria innocua # 15 117 17 116 116 73 35.0 1e-13 MQATVTEIGKHAIDDSEKMIILFGETATDTLKQHAVIQSFPEKDQVTLAEGDHLKIGDTN YTITKVGSFANSNLQSIAHSTLIFADAPTDEDDVIRNGVYLTPHQLPKITIGTTIDYLVN GA >gi|237663595|gb|GG668923.1| GENE 333 279143 - 280312 1432 389 aa, chain + ## HITS:1 COG:SP1505 KEGG:ns NR:ns ## COG: SP1505 COG0628 # Protein_GI_number: 15901352 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Streptococcus pneumoniae TIGR4 # 11 379 10 378 388 351 51.0 1e-96 MDKKQTTDKRLSWFWRWFLNNQVVTALLIVLLVLLIILTFTKVSYLFKPVWQFFGVVGLP VIMAGILYYLLNPIVDYLEKKQISRVWSIIGLFILIVALLIWGGIVIVPKIREQSVSFVN HFPQYIDTIDQKSQEILSDPLFAQFREQLEAAGDKVVSSLGTIIKNVSTFTVQGIGNFFG AVATIFVAIITMPFILFYLLKDGKNLAPYLMKFLPVKMRKPTLKVLAEVNDQVSSYIRGQ LTVAFAVAIMFMIGFSVIGLDYAVTLGIAAGFLNLIPYLGSFLAMIPAVFLGIVSGPALL IKVLIVFAIEQTVEGRFISPLVLGSQLSIHPVTILVVLLTSGKLFGIVGVILGIPVYAAA KVIITHIFEWYQIVSGLYDEDKPDQQEST >gi|237663595|gb|GG668923.1| GENE 334 280374 - 281000 809 208 aa, chain - ## HITS:1 COG:BS_yvaB KEGG:ns NR:ns ## COG: BS_yvaB COG1182 # Protein_GI_number: 16080407 # Func_class: I Lipid transport and metabolism # Function: Acyl carrier protein phosphodiesterase # Organism: Bacillus subtilis # 1 208 1 211 211 191 44.0 6e-49 MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVYAPETNMPEIDEELLS AWGALRAGAAFETLSENQQQKVARFNELTDQFLSADKVVIANPMWNLNVPTRLKAWVDTI NVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYEGKDFASQYIKAILNFIGVEQVDGLFI EGIDHFPDRAEELLNTAMTKATEYGKTF >gi|237663595|gb|GG668923.1| GENE 335 281302 - 282144 925 280 aa, chain + ## HITS:1 COG:lin2530 KEGG:ns NR:ns ## COG: lin2530 COG3711 # Protein_GI_number: 16801592 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 1 274 1 274 285 246 45.0 5e-65 MRIEKVLNNNVVLSRNEQGEEIVYMGRGLAFQKKIGDTINPDYVEKEFVLKDSAMAGQFQ QLFEDVPTKEVEVVKQIVDLAETTLAIELSSNIYLTLTDHIHYALLRAKEGIDIPNPLVF ETRKFYPKEFEIAKQALAIIAEKLGVQFSENEAGFIAFHIVNAEQGNGNMEVTMEATKMV RDILTIISRYFGQVFDEDSLNYQRIVTHLQYFAQRYLKQEAHDEEDEFLFALVQGKYPKA FQAVQRINEYLLKSYDRPIDQAEMIYLTIHIQRVVNDKKA >gi|237663595|gb|GG668923.1| GENE 336 282307 - 284187 2242 626 aa, chain + ## HITS:1 COG:BH0296_2 KEGG:ns NR:ns ## COG: BH0296_2 COG1263 # Protein_GI_number: 15612859 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus halodurans # 100 455 2 355 368 290 46.0 5e-78 MSKNQEIAARVLKAVGGEGNVNSVVHCATRLRFKLKDENKADTAALNADPDVIQVVQSAG QYQVVIGSHVSDVYKDLMANSGLGNDSDNREKESGGNIFNRLIDIISSIFTPFLGAMAGA GVLKGFLTLAVTMGWLADTSGVYLVLFSIADGLFTFLPIMLAFTDAKKFNTNPFLAVALA MALVHPSITALAGKTISFAGLPVIIGPSGYTSSVLPIILAVFAQSYVERFFKKVIPSFLQ IICVPLAVFLIMAPVTFLAIGPIGTVIGDWLGQGYNAIYAFSPIIAGLLMGSLWQVLVMF GMHWGFVPIMMLNLTQGGDTMVPMLLPAVIAQGGAALAVFFLTKNVKLKGLALSSSITTI FGITEPTVYGVTLPLKKPFIAACIGGGIGGAFVAMNHVKNFTFGLVSMLSLPGFIPAETK DTAPMITGAIGAGIAFIIAFVLTFVLRFEDQPNPETATEKTATDKMVAPVKTNQEDKIIL ASPLQGEILPLEKVQDPVFASGALGKGVAIEPTEGKLYAPADGEITTLFPTGHAVGLTTT EGVELLMHIGMDTVELDGKGFELSVKQGDSVKKGDLLVTFDIAAIKEAGYPVVTPIVVTN TNDYLDVLDMNQTDVLHGEDFLAIIK >gi|237663595|gb|GG668923.1| GENE 337 284212 - 285657 1635 481 aa, chain + ## HITS:1 COG:L89194 KEGG:ns NR:ns ## COG: L89194 COG2723 # Protein_GI_number: 15673441 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Lactococcus lactis # 7 480 3 478 478 676 70.0 0 MTTTTKFPKGFLWGGATAANQLEGAYLADGKGLSVADAMPGGKQRFAILGDEAFDWTIDE TKYRYPNHTGIDHYDRFKEDIALFAKMGFKCYRFSIAWSRIFPQGDETQPNEAGLKFYDA VIDECLSYNIEPVITISHYEMPLHLAKEYGGWKNRQLVDFYERFAETVLTRYHQKVNYWM TFNEINSAFHFPALSQGLVKSNGANDYQNIFQAWHNQFVASSKAVKIGHELNPELKIGCM IIYATTYGIDSNPVNQVATMIENQEFNYYCTDVQVRGEYPAYAERIYQKYAVKDLVIEEG DLELLKEYPVDYIGFSYYMSTAVDVTGTTNDTANGNLLGGVKNPFLEASEWGWQIDPEGL RIALNELYNRYQKPLFIVENGLGAIDKVDENFYVADDYRIDYLRRHIEAMAEAVADGVDL MGYTPWGCIDLVSASTGEMSKRYGFIYVDLDDEGNGTKNRYEKKSFNWYKQVIETNGQNL D >gi|237663595|gb|GG668923.1| GENE 338 285839 - 286408 659 189 aa, chain + ## HITS:1 COG:SA1052 KEGG:ns NR:ns ## COG: SA1052 COG0194 # Protein_GI_number: 15926792 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Staphylococcus aureus N315 # 9 157 8 162 207 82 35.0 4e-16 MIKQLQHPFFVIMGPSGSGKTAITSKVFPKNYKVISHTTRKKRLDEVDGVDYYFETKASF QTLIETNQLVEYDFYHGNYYGVGVAAIVETTKEHPAYNALTFPGFQAVFERFGESVIPVF FDVSKENIYQRLKQRESDPKIIEERLNLYDQEILIKNQLEQYPNYQRIDANGPIKEVAGL LQECIKHYY >gi|237663595|gb|GG668923.1| GENE 339 286556 - 286765 333 69 aa, chain + ## HITS:1 COG:L53789 KEGG:ns NR:ns ## COG: L53789 COG1309 # Protein_GI_number: 15672643 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Lactococcus lactis # 1 65 1 65 189 68 53.0 3e-12 MPTNTFFHLPEEKQQRLLDAAQIEFSRHSLQEASIANIVKLAEIPRGSFYQYFENKEDLY FYYFATLKK >gi|237663595|gb|GG668923.1| GENE 340 286842 - 287231 264 129 aa, chain + ## HITS:1 COG:no KEGG:EF2594 NR:ns ## KEGG: EF2594 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 129 97 225 225 244 98.0 1e-63 MIVEVLTGENASFYRNLFVNMDYRASRRVTDNLATGEEEKNRKQHCHKHRGRKGHAAYAE HLYQIIDRSKLTIETPKEFTWFMQTAMHAVFSTIVDGYRQQRENTAYDSTEAVKQLKMKL NWLKNGAYK >gi|237663595|gb|GG668923.1| GENE 341 287252 - 288979 185 575 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 332 559 2 231 245 75 25 2e-12 MIKLVKRMSLWSVFAAVLFMIVQIIADLYLPTLTSNIINDGVAKGDINYIWSTGVVMLGF SLISIVASIGNTFFATKESQSLGKKLRTDIYRKVENFSNNEFDKFGTASLITRTTNDVNQ IQMVMQMFLRLMINAPLTLIGASFMAYNKDPQLTKIFLYVLPIMAVLVGGIMFLAVPLFK RMQKKTDRLNLVFREGLTGVRVIRAFGKANYEEQRFDEANKDYTQTAIKVNTIVALMIPL MTLIMSGTNIAITWFGGHYIAEMQLEVGNLIAFMTYAMQILMSFMMLSMIFVMVPRAQAS ADRINEVLNTDSEIKDVPNPELLSLKGDKATLAFEHVNYRYQHAENLALEDIDFSAKSGE TVAIIGGTGSGKTTLVNLLPRFYDVESGKILLNGKNIKDTSQHNLREMIGFVPQKAVLFT GTIRENMQYGAPNATDEEIWQALEIAQAKAFVSELAEGLDSHVEQGGGNFSGGQRQRLAI ARALVKPADVYVFDDSFSALDFKTDANLRKALKEQMTDAIVVLVAQRVSTVMEASTILVL DEGKLVGKGTHEELLANNQTYQEIVHSQLREEDLA >gi|237663595|gb|GG668923.1| GENE 342 288976 - 289074 229 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSSRPKGGPMGGGPGRNIGAKGPKTKKISGKQ >gi|237663595|gb|GG668923.1| GENE 343 289092 - 290846 212 584 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 361 566 40 251 329 86 30 2e-15 MSKRMLSIIAVLVLAIAAVVFQIQTPKVLGQATTEIFKGVMKGAAEMKQGLKITSFPIDF DKIGQILLIVIAMYLISAVFNFLQQVIMTRVSQRTVYELRQELEAKMNKVPISYYDTHSN GDIMSRAINDMDNIASTLQQNLTQLITSIVTFVGVLWMMLTISWQLTLIALATVPLSLIV VMVVAPRSQKHFAAQQKSLGLLNNQVEETYGGHVVVKSFNHEESDQEVFEKENEKLYHAG RKAQFISAIIMPLMNFIKNLGYVFVAVLGGVKVANGMMDLGDVQAFLQYTNQFSQPITQI ANLMNTIQATVASAERVFEVLDEEEMVDEPSGIPVETDSPYRVSFEHVAFGYSPEKLLMK DFNLNVKPGEMVAIVGPTGAGKTTLINLLERFYDISSGSIKYDGVDTRDLSREELRAHFS MVLQDTWLFTGSIYDNIHYGNDQASEEEVIRAAKAAHVDDFVRKLPEGYQTILNEEASNI SQGQRQLITIARAFLANPDVLILDEATSSVDTRTEILIQAAMNRLLENRTSFVVAHRLST IRDADTIIVMAEGSIVETGTHDELMAKNGFYADLYNSQFSEEVA >gi|237663595|gb|GG668923.1| GENE 344 291032 - 291877 944 281 aa, chain + ## HITS:1 COG:lin0649 KEGG:ns NR:ns ## COG: lin0649 COG2514 # Protein_GI_number: 16799724 # Func_class: R General function prediction only # Function: Predicted ring-cleavage extradiol dioxygenase # Organism: Listeria innocua # 1 249 2 255 279 68 21.0 2e-11 MEVTEKMTEFQLEKAATLKTIAIRAKKVGEMVDFYKKVMGFVLKSEENNLSIWGTREAGT QLLILEETRKAEDFHNEEKQMAYFSIKVPTEKEFLQIAQRVLEQDYPIDESFQIGTRQSM FITDLEGNQFEIFHDEATANSTSEKQPIVLKDLISEDLEPHQGLAAGSYLAHVQLKTNNQ KEIKAYYEEVLGLKHNEKDQFVLEDGKATIGFQKPETSEVDQLPDPHLGLDFFTIKLSGQ DHILAMEQQLTSKNQEFFIDQKKAIVTVFDPIGLEWWFVLK >gi|237663595|gb|GG668923.1| GENE 345 292007 - 293050 861 347 aa, chain + ## HITS:1 COG:L114054 KEGG:ns NR:ns ## COG: L114054 COG1680 # Protein_GI_number: 15674027 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Lactococcus lactis # 9 330 11 308 328 221 40.0 2e-57 MYEKTKWKIQNMMKKGVFSGASFCFIEGEKEESNCWGLAQVKPTKEQLTSAMLFDVASLT KVVGTTTVILQLVEEGKIILDQSLQTYYPSFQDSNITIRHLLTHTADLQGYIPNRDQLNA QELKDAYNHSFHAGKAIGKKVVYTDAGTILLGFMLEEMFQQSMIEILSERVLLPLGMNES TFLPKNPLNCVPTELHEQRGLIRGATHDPKAFVLREHAGNAGLFSNVYDLTKFVRMYLNR GSYHNHQFLKKETIDLLLVNQVPAADKPRSLGWDFKYDVATQRPLLFHTGYTGTFLLIDV QQQSAFIFLSNRVHPEDHRNTYIEERDQLLATYLKEKSSVSDEMTSF >gi|237663595|gb|GG668923.1| GENE 346 293092 - 294063 1211 323 aa, chain + ## HITS:1 COG:L179409 KEGG:ns NR:ns ## COG: L179409 COG1482 # Protein_GI_number: 15672751 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Lactococcus lactis # 1 321 1 315 315 408 63.0 1e-114 MQEPLFLQPVFQEKIWGGNRLHTLFGFDLPSDKIGEDWAISAHPHGVSTVLNGEFKGKKL DELWADHQELFGHAGGAVFPLLTKILDAEDDLSVQVHPDDAYGQKHEGELGKTECWYIID AEPGAEIIYGHHAKTKEELAEMIEEGRWDDLLRKVPVKKGDFYYVPSGTIHAIGSGILIL ETQQSSDTTYRVYDYDRTDDQGKTRELHIQQSIDVTTVPAKDPDLSIQQENQGQSSIVTY VKTDFFNVYEWRVSGILKVKKQAPYTLATVIEGVGRLITEDAAKADVATFDLKKGDSFIF PTDIPSWRFEGDLTIIASEPGSR >gi|237663595|gb|GG668923.1| GENE 347 294118 - 294663 493 181 aa, chain - ## HITS:1 COG:no KEGG:EF2588 NR:ns ## KEGG: EF2588 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 181 1 181 181 252 100.0 5e-66 MKKITPRIITIIAFSVALNYLGSTIALLLRLPIYLDSAGTIFTGALLGPLFGALTGILTS LLTGLTTDIFSLYYSPVQLCTGILAGLLLHQQLKVTKLPFKTLWLTIPGTVISSLITVCL FGGITSAGSSIIVQFLYGLGFNQLASVLLVQLITDYGDRLLSVIIVTAVIAALPKRSFIT K >gi|237663595|gb|GG668923.1| GENE 348 294666 - 295640 837 324 aa, chain - ## HITS:1 COG:PA0143 KEGG:ns NR:ns ## COG: PA0143 COG1957 # Protein_GI_number: 15595341 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Pseudomonas aeruginosa # 2 299 19 318 329 192 39.0 7e-49 MQKVIIDCDPGIDDTLALLYALASPELDVQAITVVCGNVPVEIGVGNVFKCLEKVNRLDI PVYQGAASPLKRPFVSAQDTHGMDGLGETYFPRTSKIQAQALSAADYLAQTFQQATDCSI IALGPLTNIALALKKEPLLGRNLQRFVSMGGTFKSHGNCSPVAEFNYWCDPDAAAWVFEE LGAKIEMVGLDVTREIVFTPTILNYCQRLNPKMGNYLAEITQFYFDFHWKYERILGCVIN DPLAVAYFIDPTLCQGFSSYGQIVPDGIAMGQSMIDQYHFHQQPANCHVLTTVDSQQFFV KFLSILLNVQIDEIERDFKNLRMG >gi|237663595|gb|GG668923.1| GENE 349 295877 - 296566 968 229 aa, chain - ## HITS:1 COG:SP1590 KEGG:ns NR:ns ## COG: SP1590 COG3442 # Protein_GI_number: 15901432 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Streptococcus pneumoniae TIGR4 # 4 224 16 236 260 285 63.0 4e-77 MSKELVVCHLYGNLLNTYGDNGNLLMLKYLTEKMGVTFRSEIISIYEPFDPEKYDLVFVG GGQDFEQLIISEDIQNKKEALTSYIENDGVLLAICGGYQLLGHYYVGAQGEKIKGIGALD HYTLSQDNNRFIGDIEIYNEEFDETYYGFENHNGMTFLGEGERPLGTVKQGKGNNGQDNG EGVVYKNVFGSYFHGPILARNKNLGIRLIRTALEKKYGEPIAIPETLYK >gi|237663595|gb|GG668923.1| GENE 350 296559 - 297911 1539 450 aa, chain - ## HITS:1 COG:L114717 KEGG:ns NR:ns ## COG: L114717 COG0769 # Protein_GI_number: 15673088 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Lactococcus lactis # 1 445 1 445 449 572 62.0 1e-163 MGIRSHLAIAAGKTSQWVLQTFFKGGSSYPGKLALKIDPKILDTLAKDYEIVVVTGTNGK TLTTALTVNILRQEFDEVLTNPTGANMEQGIVSTFLNAKAKKGQKKFAVLEIDEASLSRV TKYIQPKLFVFTNIFRDQMDRYGEIYTTYRLIMEGAAAAPEATILCNGDSPIFNSKETVN PRKYYGFNHLPPKEQLAHYNTDGVLCPKCNHILHYKMITYANLGDYYCPNCGFKRPELDV QLTEMVRMDNTSADFVIDGEEYGIAVGGMYNVYNALAATAVAEYYQVAPDKIRAGLAYDE KVFGRQETIKVGDKECTLVLVKNPVGLNQVIDMMGLAPYSFSLVSLLNANYADGIDVSWI WDGNHEAFADMDIPKVIAGGDRHEDMALRLKVAGIPEEKLLEIPDLEQVISEIKTLPTDH VYILATYTAVLQLRKSLTAQGYIQGGMNGV >gi|237663595|gb|GG668923.1| GENE 351 298117 - 298755 663 212 aa, chain - ## HITS:1 COG:VC0355 KEGG:ns NR:ns ## COG: VC0355 COG2964 # Protein_GI_number: 15640382 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 13 209 37 230 240 79 29.0 4e-15 MLSDEKLTFLTQIAKGLAGQFGENCEVVIHQINEDNINNSIVSIENGHVSSRHLGDGPSQ VVLEALKKDPSELNDHINYLTRTHDGRILKSSTMYFKDENGQLDGIFAINYDITTLIAAE SNLKSLISTAEPEEDKDPDYIPQDVNELLDDLIHESVKLVGKPVPLMTKDDKIKCIQFLN NKGAFLVTKSGDKVSNFFNISKYTLYSYIDAK >gi|237663595|gb|GG668923.1| GENE 352 299157 - 300491 1620 444 aa, chain + ## HITS:1 COG:ssnA KEGG:ns NR:ns ## COG: ssnA COG0402 # Protein_GI_number: 16130781 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli K12 # 24 443 45 461 464 249 35.0 6e-66 MLLIGNGRLITRDAQNHFFENGCVAIDGQVVKQVGMTEDLKQAYPEATFIDAKGGVIMPG FINMHNHIYSTFARGLSLTNYHPKNFMDILVDQWWRIDRALTLEDTYQSGKVAYLDSIRN GVTTVFDHHASYGEITGSLTQLSNAADELGIRTCLCYEVSDRDGEQKMREAVQENAAFIK ASSLRKDDMQKAMMGMHAAFTLSDASLELCAANTPDGIGYHIHIAEDLADVHDSLKKYGK PIVNRLFDLGILGKQTMAGHCIHIGPHEMELLRETDTMVVTNPESNMGNAVGCPPAIRMF NEYGILMGLGTDGYTNDVTESYKVGNVIHKHHLADPNAAWAEIPAMLFDNNPQMANRYFK TKLGVLEPDAAADVIIVDYHGPTPMTKENYNMHILFGMNGGMVTDTVINGEIRMRNREVQ GIDEEKVWHDAQTQAQSFWKRVNQ >gi|237663595|gb|GG668923.1| GENE 353 300522 - 303527 2872 1001 aa, chain + ## HITS:1 COG:ygfK_2 KEGG:ns NR:ns ## COG: ygfK_2 COG0493 # Protein_GI_number: 16130780 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 439 954 1 530 582 396 42.0 1e-109 MSDIMHPISIEALLNWVFSEYQQDGTIFGIRKFYHADPTKTISLFGEKMETPCGPAAGPH TQLAQNIIAAYLTGSRFFEVKTVQILDGEDLPVSKPCIAAADECYNVEWSTELRVPQAYD EYVKAWFVLKLLSKEFELGDPNGFIFNMSVGYDLAGIQSPKIDRYINEMQNAEGTPIWAE CQAAAKKYLSYFKKVDDLYIEAISPKVCHSITLSTLHGCPSDEIEQIAAYLLSEKGLHSF IKCNPTMLGYEYARQTMDELGFDYMVFGDHHFKEDLQFEEAVPMLQRLQLLANSKNLSFG VKITNTFPVTIAANELPGDEMYMSGRSLFPLSISLAQKLSEAFDGKLQISYSGGADIFNS KEIFDAGIWPITMATTLLKPGGYQRMNQVANVLSAAEYPQMVHVNLDKLAQVVEKAKTQS RYQKSIKLPESTKLRKTVPLTDCYIAPCRSDGGCPINQDIPAYLRYVSEGNYLKALQVIV DKNPLPFITGTICAHPCMTKCTRQFYEESIHIREVKLEAAEHAYDELLTTLEKPQPKENA PKTAVVGGGPAGISAGYLLAREGMPVTVFEKSETIGGVCSQIVPEFRISMESVQKDVQLA EFMGVEFRTGQEAPSLAELKNQGYTNVIYAIGAWKHGVLRLESGRALNSLEFLKANRENP TINPYGEQIIVVGGGNTAMDCARAATTLPGVKKVSVVYRRNKRNMPADEEELYLALEDGV DFLELLSPIKHENQQLTCEKMVLGERDASGRRRPIGTGEMIDIPADTVIAAVGEKVDTEF YQALGIHTDNYGKVVSNQETLETNIPGVYVIGDANLGPATIVEAIADATKAANNICLVHN HHYEKDNLNSDVAFVRNKRGILVTDEMSCSQASRCLECSTICESCMDVCPNRANIVVYVE GKPQIVHVDRMCNECGNCETFCPYASAPYKDKFTLFNSESDFYDSTNSGFYVQNPVDKIC LLRLWGTVSTIQLTDQGLDVPEDLIALMVTMIEEYAYCMQA >gi|237663595|gb|GG668923.1| GENE 354 303557 - 304930 1030 457 aa, chain + ## HITS:1 COG:BMEI1644 KEGG:ns NR:ns ## COG: BMEI1644 COG0044 # Protein_GI_number: 17987927 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Brucella melitensis # 2 455 7 457 489 351 41.0 2e-96 MSILLKGGTVVSAYNRRQLDIRIDGEQIVEMGANLPVENSQIEDVTGCYVLPGFIDAHTH LELNNGKGSLSTADNFTTGSQAAVAKGTTTVIDMATPNKGGSLKDCLATWNQLAEGKSSC DYTYHMSMIEWNPTIAAEIQEMIAAGITSFKMYMAYDNLRTTDAEIFEAMKEIKKVNGML GVHCENGDLVDELIQSYVSQGKLTPHYHPLSRPAAVEAEAVARYLMIAEMADLPVNIVHL STKRSLEAVERARQRGQSVYVETCPQYLLLDDHLYDAPNFEAAKYVCSPPLRKREDQQAL WQGIKEGAINTISTDHCSFNFHGQKTVGKDDFSKIPNGMPGVETRPELIYTEGVAKGRIT LEKMVALLSENIAKQFSMYPQKGVVQEGSDADLVVWDPRTTGVIAARTQLQNVDYTPYEG FETQGQARMVYLRGQKVAEAGQVILANQGKFVFRKAT >gi|237663595|gb|GG668923.1| GENE 355 304954 - 306147 1227 397 aa, chain + ## HITS:1 COG:STM1002 KEGG:ns NR:ns ## COG: STM1002 COG1171 # Protein_GI_number: 16764362 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Salmonella typhimurium LT2 # 19 396 22 399 404 414 52.0 1e-115 MEKIKWTANEMPKTEDKYLPLMSKEKIEKALAFHKSFPQYSETPLAELNHMAAYLGLNDF FVKDESYRFGLNAFKVLGGSFAMANYIAEKLKKDVSELTYDELTSDQLRSAFGQATFFTA TDGNHGRGVAWAANKLGQKSVVLMPKGSTQTRKENIEKEGATVTIEEVNYDECVRMANKM AEETENGVMVQDTAWDGYEKIPTWIMQGYGTMALEASQQLRKFGSERPSHVFVQAGVGSL AGAVIGYFANAFPENPPVMVVVEAQAADCLYQSAIKKDGEIRFVDGDLQTIMAGLACGEP NTISFDILKNHTSFFVSAPDWVSEKGMRMLGAPLKGDPQVVSGESGAVAMGLVATVMQDP DYQELREALQLDETSNVLMFSTEGDTDPDNYKKILWR >gi|237663595|gb|GG668923.1| GENE 356 306153 - 307463 1546 436 aa, chain + ## HITS:1 COG:ECs3745 KEGG:ns NR:ns ## COG: ECs3745 COG0624 # Protein_GI_number: 15832999 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli O157:H7 # 3 431 7 396 403 525 59.0 1e-149 MDFNAVNAAAEGYREDMVKFLRDLVKIPGESAEEGNKIARAKAEMEKLGFDKIDIDPQGN LLGYMGSGEKLIAFDGHMDTVGIGEMSNWKFDPYDGYETETEIGGRGTSDQEGGIVSAIY GAKIMKDLGLLSEKYTALVTVTVQEEDCDGLCWQYIIKEDGIRPEFVVSTEPTDGGIYRG QRGRMEIKVDVKGVSCHGSAPERGDNAIYKMADILQDVRALNNNGDTESTAIRGLVRMLD PKYNPEWQEARFLGRGTVTVSQIFHSSPSRCAVADGCTVSLDRRMTAGETWESCLEEIRN LPAVKKYGDDVTVSMYNYDRPSYTDLTYEIECYFPTWVIPENHDVTKALMETHKNLYGET RKGSVETVEMREERPLLDKWTFSTNGVSIMGRNGIPCIGFGPGAEAQAHAPNEKTWKDDL VRCAAVYAALPTVYCG >gi|237663595|gb|GG668923.1| GENE 357 307502 - 308695 1501 397 aa, chain + ## HITS:1 COG:ECs3743 KEGG:ns NR:ns ## COG: ECs3743 COG0078 # Protein_GI_number: 15832997 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Escherichia coli O157:H7 # 1 394 2 394 396 543 66.0 1e-154 METFKEYIEKLDKLEFEKMYENDFFLTWEKTRDELEAVFTVADTLRYLRENNISTKIFDS GLGISLFRDNSTRTRFSFASACNLLGLEVQDLDEGKSQISHGETVRETANMISFMADIIG IRDDMYIGKGNAYMHEVSESVQEGYKDGVLEQRPTLVNLQCDIDHPTQAMADALHLIHEF GGIENLKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVA KKNAAEFGGNFTKTNSMAEAFKDADVVYPKSWAPFAAMEKRTELYGNGDQAGIDQLEQEL LSQNKKHKDWECTEELMKTTKDGKALYMHCLPADITGVSCEEGEVEASVFDRYRVELYKE ASYKPYVIAAMIFLSKVKNPQKTLTDLADKATPREVK >gi|237663595|gb|GG668923.1| GENE 358 308937 - 309881 1119 314 aa, chain + ## HITS:1 COG:yqeA KEGG:ns NR:ns ## COG: yqeA COG0549 # Protein_GI_number: 16130776 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 1 309 1 308 310 356 63.0 3e-98 MGKRVVVALGGNALGNNLTEQMTAVKQTSKAIADLIEAGYEVILSHGNGPQVGMIQLAME EFSFNNPQYPVVPLSMCVAMSQSYIGYDLENALQEELRQRNISKAVTTIVTQVVVDENDP AFKKPTKPIGRFMTKEEAEQLVKEKNIQVMEDAGRGYRQVVASPKPKNIVELLTIQTLVD AGQTVIAGGGGGIPVIQEGNRLKGVNAVIDKDFCSERLAEQVDADLLVILTAVEKVCINF GKENQETLGNVSTEKMKQYAQEGQFAPGSMLPKVEAAIKFAESKPGRKTLITLLEKAKEG LSGKTGTLIENKES >gi|237663595|gb|GG668923.1| GENE 359 309896 - 310276 434 126 aa, chain + ## HITS:1 COG:slr0709 KEGG:ns NR:ns ## COG: slr0709 COG0251 # Protein_GI_number: 16331956 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Synechocystis # 1 124 1 127 130 134 55.0 5e-32 MTNKMINSAQAPAAVGPYSHSVLAGNTLYISGQLGLDPQSGEMKATVEEQAKQAFINLGS ILKEVEMTYDNVVKTTVFLQHMSDFSKINEIYGNYFSEVLPARSCVEVAKLPKDGLFEIE AVAVKG >gi|237663595|gb|GG668923.1| GENE 360 310370 - 311689 404 439 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 11 439 6 427 447 160 28 1e-37 MNEKKEQALFEYDAKLSISEAIPMGLQHVVAAVVGIVTPGIMIAKVCQLSPSDTTILIQT SLIFSAVATLIQLFPIFGKVGSRLPVMMGASFAYVPILMAIGADFGIAAIFGSQLVGSIL VIIVGLFIKKIRVLFPPLVTGTVILSIGLSLFPVAIKYMAGGAGSADFGSARNWLVALLT FAIVFYFNYFAKGFLKLSAILNGMVIGYLISLALGMVSFEPVQNAKIVQVITPFHFGLDF QLVPIFTLVVMFIVDAVQAIGQFTATTVGAMDRDATDEELSGGIMGSGFTNFIGSLFGSI PVATFGQNVGLVTVTKVINKYVLVFASVILLIAGFVPKVAALLTTIPYAVIGGATISVFA SISMTGIRMIASQEMTPRNTGVVGTALAFGIGVTLSTGSLAGFPTWVTTIFGNSEVILTT LVAVLLNVILKPKKRVALE >gi|237663595|gb|GG668923.1| GENE 361 311783 - 312142 307 119 aa, chain + ## HITS:1 COG:AGc4647 KEGG:ns NR:ns ## COG: AGc4647 COG2005 # Protein_GI_number: 15889822 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 17 107 22 109 131 61 37.0 3e-10 MFTYSLNLKLKTDRNFFGPGVVEVLQKIQQTGSLNLAAKEMKMSYNKAWRIVRVAEEELS FPLIIKSVGGCNGGGSIVTDQGKELIDQYLLFEKKVYQQVEACFEEIFKEQDVVSEELK >gi|237663595|gb|GG668923.1| GENE 362 312139 - 313146 859 335 aa, chain + ## HITS:1 COG:CC2617 KEGG:ns NR:ns ## COG: CC2617 COG1975 # Protein_GI_number: 16126854 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Caulobacter vibrioides # 17 333 18 323 338 103 28.0 5e-22 MREVFQRLKQAILEKQDTMLLTIGTSSGSTPRSQGARMLVSAEGRIAGTVGGGAVEFQAE QVAKKLLIEKENAQRQFILAPNNIADLGMVCGGNVTIFFHYLSWETPFLKELCESIETHF QNNQQGWLMTELDQNNLGKVSFYSETGELIGSTSWEGELSLLPKGIHCVQKEETTFLTEA ILQVGKVYIFGSGHVARALVPILNYLSFYCVVVDDRPEFLTAQAFPQAEELRVIPLENLA AFIEITADDYGIVITRGHNFDFIVAKQLLETPAKYIGVMGSKHKVASQVRRLKEVGYTMT EIERIFMPIGLDIAAETPEELAISIAGELIQQRYQ >gi|237663595|gb|GG668923.1| GENE 363 313267 - 315840 2300 857 aa, chain + ## HITS:1 COG:BH0748 KEGG:ns NR:ns ## COG: BH0748 COG1529 # Protein_GI_number: 15613311 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Bacillus halodurans # 169 848 15 741 760 345 33.0 2e-94 MYSIIVNGQSETCETNKKLMDFLREDLGLTGTKDGCNQGSCGACTVLVNGKASKACLFTL EKLAGKEVTTIEGLNQWQKDVYAYAFAKTGAVQCGYCIPGMVISAQGLLNKKPEPTKEDI QKALRGNICRCTGYVKIIEAIQLAAKMFCEETSIPEEHSNGKLGEDFQRVDAVEKTLGTG IYVDDIDIEGMLHASALRSAYPRAKVLSIDSTQALAHPDCVAVFTAKDVPGNNKIGHLEF ISDWDVMIPEGEITRYVGDAVALVVSKRKETLPEIKNLVEVDYEEMIPLTSCEAALAEGA PAIHEKGNILSHEHLVRGNADEVLANSAFVVTEHYSVPINEHAFMEPECAIAQPEGEGIL LFSAGQSIYDEQREVARMLGLDKEKIHVQSKLVGGGFGGKEDMSVQHHASLAAWLLKKPV KVLLSREESLMVHPKRHGMEMDFTTGCDEEGNLTAMKAVIYADTGAYASLGGPVLQRACT HAAGPYKYQTIDVEGFAVYTNNPPAGAFRGFGVCQTAFAIESNLNLLAEKVGLSPWEIRF KNAVAPGDTLPNGQLVSKNAALKEALLAVKDVYEQAEVAGISSFFKNSGVGVGLPDTGRC IISVEEGKIHVRTSAACIGQGLATVTTQIACETLNLPPEMIVAEAPDTRRTPNSGTTTAS RQSLFTGEATRRAAMQLRYELDMGRALSDLEGEEFYGEYSAKTDPLINDKKSPVSHAGYG YAAEVAILDDKGKVAKFVAAYDMGQVVNPRAAEGQIEGGIAMGMGYALTEKFALEEGYVK AKYATLGLVNATQVPPIETILVHADNLHEGLAYGIKGVGELATIPTAPALAGAYFALDGQ LRPSLPLENTPYQKKKR >gi|237663595|gb|GG668923.1| GENE 364 315854 - 316435 705 193 aa, chain + ## HITS:1 COG:APE2223 KEGG:ns NR:ns ## COG: APE2223 COG2068 # Protein_GI_number: 14601923 # Func_class: R General function prediction only # Function: Uncharacterized MobA-related protein # Organism: Aeropyrum pernix # 8 186 1 189 205 87 32.0 1e-17 MSLVSVIILASGNSQRMGQNKLFLKYQGKTFLEHTLTLVNQLDVLERILVVSPENQPAFP LPKNIQLILNHQWQEGQSSSIRLGTEQARGAGYLYLPSDQPLLTPKMLQPVLDKCQRNKI IVPLQKDGCPSSPVLFGNQFRQELLTLTGETGGRMIYERFPEAVQMLRIATPGRLKDIDT PEEYRKLIQETNS >gi|237663595|gb|GG668923.1| GENE 365 316449 - 317597 1136 382 aa, chain + ## HITS:1 COG:CAC2354 KEGG:ns NR:ns ## COG: CAC2354 COG0520 # Protein_GI_number: 15895621 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Clostridium acetobutylicum # 4 380 1 374 379 236 38.0 4e-62 MKDLVYLNYAATSYKKFPATIEALTAYLAENQFMNYGRNAPLLREGLPLLETRQLLADFF QAPSAAQITFTNNATTSLNLALAGILQPGDHVITTMLEHHAVARPLHLLEKERGISVTYV ACQKTGLLDVEDIQQAWRTNTKALVMTHASNVLGTILPIEECFQWAQQKGLLTVLDAAQT AGFLPIKMTQMAIDVLAFTGHKSLYGLAGIGGLAFSERGAEAVKPLITGGTGSRSNSFDQ PSFLPDKFEAGTLNSLGILSLNSSIKELNKIGLAAIQKHERTLMQNFLDGLSGLPVTILG TKDVAQTVPVVSIILWNQEETVVAQQLAEQYGIMTRAGLHCAPLAHETAGTLATGTLRFS FGWQTTPEEITWTIHALQELLI >gi|237663595|gb|GG668923.1| GENE 366 317613 - 318635 926 340 aa, chain + ## HITS:1 COG:Cj1504c KEGG:ns NR:ns ## COG: Cj1504c COG0709 # Protein_GI_number: 15792818 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Campylobacter jejuni # 28 339 1 307 308 213 40.0 3e-55 MDFLSQCTSGGCGAKIESRVLNQLLQHLPETPANERLLVGFEHADDAAVYQITPEKALIS TVDFFSPMVNDPLSFGKIAVANALSDVYAMGGTVLYALNLVCFPQKMSKEWLEQMLLGGS LKLKEAGALLAGGHSIYDHEPKYGLAVTGEVHPENLWHNNTQQVGDVLILTKALGVGIIQ AAVRGQLAKQTEQKIAQNSMERLNKYAAANARSYAVHACTDVTGFGLLIHAKEMADNQVT LLIDTEALPTITGALAYAAECLVTAAGQRNRQTIGTTIDYSKISMEMQELLFNPQTSGGL LISVAADEAAACLAAIQKEDPVAKIIGEVLPKEQQAVVLL >gi|237663595|gb|GG668923.1| GENE 367 318651 - 319238 686 195 aa, chain + ## HITS:1 COG:no KEGG:EF2566 NR:ns ## KEGG: EF2566 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 195 1 195 195 322 99.0 4e-87 MKLVDALGKPCPIPVIETKKALAELGLAGGTIEVLVDNEVAIENLKKLAAKKQATLTAKQ IEATVFSVKITVPEEATQQTSQSATDLVITIGSDQLGTGDEQLGRLLMKSYLQSLSEAET VPTQLLFFNRGAFLTNQAANTLADLQQLAEKGTTIQTCGACLDFYHLTDTLAIGSITNMY EIVETMNQAAKVITL >gi|237663595|gb|GG668923.1| GENE 368 319259 - 319516 169 85 aa, chain + ## HITS:1 COG:no KEGG:EF2565 NR:ns ## KEGG: EF2565 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 85 1 85 85 172 98.0 4e-42 MEYLLTFPNTHYAVQAEQVLLTRKVAVRVFTLPPSLTDGCGIGLLINEAEITHSVCFLEE AKVRVASIFSVKNDLGERRYQLWSP >gi|237663595|gb|GG668923.1| GENE 369 319504 - 320259 451 251 aa, chain + ## HITS:1 COG:no KEGG:EF2564 NR:ns ## KEGG: EF2564 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 251 1 251 251 477 98.0 1e-133 MESLKKCFDLQGKEIVSIVGSGGKTSLMWALAKTYRKEAVLVSTTTKIGFPQRQLYDYFY TNHFEKITPNICGITLAGTAINNQTKLTMPAMTSLQILFQHFTKVFLEADGSKQRPLKGW SSYEPVILKETTTTIGVLPISVIGQKIDETTIHRLPLFLELTDAQQQEPITETLLAQLIA HPKGLFKESQGKRILCLNQTHTRREFVQAMNVCLQLPKSCFEKLDKIIACNMELEKGLIL WEKSVKTSKKN >gi|237663595|gb|GG668923.1| GENE 370 320223 - 321053 816 276 aa, chain + ## HITS:1 COG:yqeB KEGG:ns NR:ns ## COG: yqeB COG1975 # Protein_GI_number: 16130777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Escherichia coli K12 # 11 269 269 526 541 235 46.0 8e-62 MGEISQNIQEKLVIVRGGGDLATGVIQKLWHVGFKILVLETECPLAIRRTVSVCDAIFQK EQRVEDLVAVRITSLKDCAKCWQQNKLPVFVDQTASAIQQLKPLIVIDAILAKKNLGTHR GMAPITIALGPGFSAPQDVDVVIETMRGHRLGRLYFEGTALPNTGIPGEIGGKSAERVVH APASGQVTHLKNIGDFVLKGEALFFIDQVPVYSPLTGTLRGLISEKVTCYQGLKCADVDP RPVEKVDCLTISDKARALGGAVLEAIFMIGRRKNVL >gi|237663595|gb|GG668923.1| GENE 371 321294 - 321752 613 152 aa, chain + ## HITS:1 COG:SPy0721 KEGG:ns NR:ns ## COG: SPy0721 COG0716 # Protein_GI_number: 15674777 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Streptococcus pyogenes M1 GAS # 1 149 1 148 149 126 50.0 1e-29 MALVKIVYASMTGNTEEISEILEEQFQEAGVEVEREECSEVDVDFFDDADACIIATYTYG DGELPFEFEDFFDELTEKDLAGKPFGVVGSGDREYGEFFCKSAHDFVGAFEKAGAKKVAE TVEIENNAEEEDIEMLKTFVKSVATTLSDSVA >gi|237663595|gb|GG668923.1| GENE 372 321808 - 322647 932 279 aa, chain + ## HITS:1 COG:TM1639 KEGG:ns NR:ns ## COG: TM1639 COG0543 # Protein_GI_number: 15644387 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Thermotoga maritima # 4 276 9 280 282 323 53.0 3e-88 MFNILQSTQLSSNTFDFWLEAPRIATHAQAGQFVILRIDEKGERIPLTIAETNPQAGSIR IIFQVIGKTTAALSQLKTSDSLLDITGPLGMSTEVKQYGTVMVVGGGVGIAAIYPIIKAL KEAGNRVITILGARTAELVLLQEECRRYSDELIITTDDGSLGKKGLVTEAMEEVIARESV ACSWAIGPSIMMKFCTLTAEKHQLPIYVSLNPIMIDGTGMCGGCRVTVDGTMKFACVDGP EFKGNEVNWDEFINRMKQYQEEEAVCFTDRLKEQVEKNG >gi|237663595|gb|GG668923.1| GENE 373 322640 - 324058 1469 472 aa, chain + ## HITS:1 COG:TM1640 KEGG:ns NR:ns ## COG: TM1640 COG0493 # Protein_GI_number: 15644388 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Thermotoga maritima # 8 461 5 459 468 589 64.0 1e-168 MARKSRIKTPIAEQAPTIRKSNFEEVCLGYTLAEGQEEAVRCLQCKNAPCIAKCPVMIDI PGFILAIREGNMEQAADILSKYTNLPAICGRVCPQEKQCEQVCKLGKAKNFEPVAIGKLE RLVADWALENHMFPKKTAEPTKGKVAVVGSGPSGLTVAGDLAKLGYEVIIFEALHEAGGV LTYGIPEFRLPKKIVKQEIASIEALGVTIETNVVVGKTITMEEIMSEFDACYLSVGAGAP NFMGIPGTSLNGVYSSSEFLTRINLMHSYEFPEYDTPIKRAKNVVVIGGGNVAMDAARSA KRLGAENVNIVYRRSLEELPARIEEYHHSLEEGINYYWLTNPIAYLDDQQGNLAGVECVK MVLGEPDASGRRRPEPIPNSTFTIPADAVIEAIGQGANRVLLSTYPEIELNQWGYIQADP KTGATSIPGVFAGGDIVTGAATVILAMGAGKIAANAIDQYVKTQKTTVTSNV >gi|237663595|gb|GG668923.1| GENE 374 324079 - 327612 3707 1177 aa, chain + ## HITS:1 COG:lin0824_1 KEGG:ns NR:ns ## COG: lin0824_1 COG0674 # Protein_GI_number: 16799898 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Listeria innocua # 2 411 4 411 414 600 70.0 1e-171 MKKTMDGNTAAAYISYAFTEVAAIYPITPSSTMAELVDEWAESGLKNIYGQKVQVIEMQS EAGAAGVVHGSLKTGALTTTYTASQGLLLMIPNMYKIAGELLPSVFHVAARAVTTSALSI FGDHGDVMATRQTGFCMLAESSVQEVMDLSAVAHLASLEGSLPFVNFFDGFRTSHELQKI EVIDYDDLKEMVNQEAVTRFRMGGMNPNHPTVSGTAQNPDIHFQQRETVNKNYEEMPKIV QKYMEKINHLRGTTYDLTDYYGVEDATEVIISMGSASPVIKQTVDYLNQQGRKVGFINIH LYRPFPTENLLEKLPATVEKVAVLDRTKESGAEGEPLLLDVQSALYQHENRPIVIGGRYG LGSKDVAPNQIKAIYDHLLLPFKELKQRFTVGIVDDVTYQSLPEEPTLDLTPDTTFQAKF WGFGSDGTVGANKQAIKIIGDHTDLYAQAYFSYDSKKSGGLTVSHLRFGKEPITSTYLIE QADFIACHNASYLHKYDLLKGLKDGGTFLLNTIWDQEKVHRLLPAKLKKYIGEHQIKFYI INAVELARKVGLGRRINTVMSTAFFEVTDILTKEQYLPLLKEEVKKTYGKKSMEIVEKNY QAIDATFESLQEIVVPEDWATIVLEPENQESEVPAFVTNILEPINRQEGDQLTVSDLIEN GMKGGAIPMGTAAYEKRGIALEVPEWQIDKCTMCNECAFVCPHAAIRPFLADEEELKEAP AGFAMREMRGTDGLMYRIQVSLEDCTGCGLCVQACPVKDKAILMKPYETQKEQAMNWAFA MTLKQKANPVKKLSVKGSQFNQPLMEFSGACEGCGETPYIKLLTQLFGDRMMIANATGCS SIWGGSSPVTPYTTNECGQGPAWSNSLFEDNAEYGYGMYIANRTKRQHLANLVEESLAKN VGSDSLQALLKDWLEHMAEGEGTQQRATKLAAALSQEADEDPLLTKIYEQKDLLVKTSQW IVGGDGWAYDIGFSGIDHVLASGEDVNIFVMDNEVYANTGGQTSKATPASAIAKFSAGGK HTSKKDLGMMAITYGNVYVAQVALGANSMQTIKAIDEAERYPGPSIIIGYTPCINHGVKG GMVRTLDQAKEAVESGYWPLYRYNPELVKKGKDPMVIDYKKTDFDKMRDFLEKQTRYSAL HTIKENQEVVEHLLDKTKEDAIERSESYNKLATHMKK >gi|237663595|gb|GG668923.1| GENE 375 327649 - 329064 1065 471 aa, chain - ## HITS:1 COG:lin0992 KEGG:ns NR:ns ## COG: lin0992 COG0168 # Protein_GI_number: 16800061 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Listeria innocua # 23 471 6 445 445 331 45.0 2e-90 MNHTRLLWLAQRKSDRFIRKNFSSIQIIVAYYILMTVISYLLFCLPIFREPDSHVPFIDL FFLAISTVSVTGLTTVDINSVFNDRGIVLLEVLFQVGGLGIMMISTVFFILSKRRITLKQ RQLIMTDMNQPRLSGIVRLIRTTFLILIWFQVIFGSLFSLYFYISGYYTNWRDAIFYGFY QAISAVTNSGFDISGDSIIPFAHDYLFLLAIMFLIFIGGIGFPVLLEIHEWLHFKKKNFR KKKRGLPFRFSLFSKIALLAFIVLFIGGTILIYLLEKDHLFLTMNESGRWVSSMFYSMTT RNAGLQINDLGDFQITTLIIFSVLMFIGCSPSSVGGGVRTTTVAIIGLYLLAFLKSEDDI SIFSRKIDDDDVKKSIVVFMLSLIMCFFAVVFLSATENLPLISIIVEVASAFGTTGLSLG ITDDLTTVGKLMIALLMFIGRIGMLYTLMIFVPKETRDLGYEYPSEKIIIG >gi|237663595|gb|GG668923.1| GENE 376 329434 - 330951 2106 505 aa, chain + ## HITS:1 COG:lin0374 KEGG:ns NR:ns ## COG: lin0374 COG1053 # Protein_GI_number: 16799451 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Listeria innocua # 5 504 9 506 506 612 67.0 1e-175 MKKVLMGVLSLGLLLGAATGCTSDQEKAAGKTKASSEKTEATSGASANGYTDPSELKDSY DVIIVGSGGAGMTAALQAKEAGMNPVILEKMPVAGGNTIKSSSGMNASQTKFQEKEGIKD SNDKFFEETLKGGKGTNDQELLRYFVDHSAEAIDWLDTKGITLSNLTITGGMSEKRTHRP ADGSAIGGYLVDGLVRNVREEKIPLFVDADVTDLVEENGQIDGVKVKMKDDKEKTVKAKA VVVTTGGFGANEKLITQYKPELKNYVTTNQEGTTGDGIQMIQKVGGALVDMKEIQIHPTV QQSDAFLIGEAVRGEGAILASQKGERFVNELDTRDKVSAAINALPEKSAYLVFDQGVRDR AKAIDFYDQKGFVEKGETIEELAEKIGMPADTLKATIDTWNQDVNAKDDKQFGRTTGMEA DLSTAPYYAIKIAPGIHHTMGGVKINTKTEVLREDGTPIKGLYAAGELTGGLHGQNRIGG NAIADIIIYGRQAGTQSAEFASAQK >gi|237663595|gb|GG668923.1| GENE 377 331178 - 331762 554 194 aa, chain + ## HITS:1 COG:L184871 KEGG:ns NR:ns ## COG: L184871 COG1435 # Protein_GI_number: 15672575 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Lactococcus lactis # 1 188 1 188 189 308 75.0 3e-84 MAQLFFKYGAMNSGKTIEILKVAHNYEEQDKPVVLMTSGLDTRDGVGKVSSRIGLRRDAI PIFEETNVFDLINDLSYKPFCVLVDECQFLNKHHVIEFARIVDELDIPVMAFGLKNDFRN ELFEGSKYLLLYADKLEELKTICWFCHKKATMNLHYIDGKPVYEGDQVQIGGNEAYYPVC RKHYFHPKTVNEEQ >gi|237663595|gb|GG668923.1| GENE 378 331774 - 332847 1436 357 aa, chain + ## HITS:1 COG:SPy1141 KEGG:ns NR:ns ## COG: SPy1141 COG0216 # Protein_GI_number: 15675118 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Streptococcus pyogenes M1 GAS # 1 356 3 359 359 479 73.0 1e-135 MYDQLQSIEDRYEELGELLSDPAVISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISD AEELLSENLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGG DEAALFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGA HRVQRVPSTESQGRIHTSTATVVVMPEAEEVEIELADKDIRVDIYHASGAGGQHVNKTAS AVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQIQQEAQSEYDANRKSAVGTGD RSERIRTYNFPQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQTSKLEEMQNG >gi|237663595|gb|GG668923.1| GENE 379 332840 - 333673 239 277 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169796031|ref|YP_001713824.1| putative adenine-specific methylase [Acinetobacter baumannii AYE] # 49 249 74 296 334 96 30 1e-18 MAKRYFEVLNWASSFLEAQGKEGYAIHYVFLERKGWDKTQWLLHMQEEMPKEEEEQLKTD LAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPRPETEELVERCLKANPDTPLTVVDVGT GTGAIAISLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVTSEKIDL LISNPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEI GFQQGAALQELLSAAYPQKTIKIEKDLSGNDRLAIAE >gi|237663595|gb|GG668923.1| GENE 380 333717 - 334739 1277 340 aa, chain + ## HITS:1 COG:lin2685 KEGG:ns NR:ns ## COG: lin2685 COG0009 # Protein_GI_number: 16801746 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Listeria innocua # 13 336 20 341 345 303 48.0 3e-82 METKKLTKQEIAQAAAAIQAGELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLI VHVNNVEMVKKYVATLPEVATKLVSAFWPGPLTLIFNVPRDTFSKTVTGGLETVAFRMPD NQATLALIEQANVPLVGPSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIGVESTVL DLTAEDGVPVILRPGAITKEQLESIIPRVKIDTHLISETAAPKAPGMKYKHYSPDAEVWI ISGQTAEWQAAIQQAKEQQEKIGLFLSDEQAAQLDTENAFVYSYGAETVKNATKELFAGL RALDEQGATTIFAQGFAETGLGTAYMNRLKKSANQKFFEK >gi|237663595|gb|GG668923.1| GENE 381 334815 - 336053 1467 412 aa, chain + ## HITS:1 COG:SP1024 KEGG:ns NR:ns ## COG: SP1024 COG0112 # Protein_GI_number: 15900895 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 2 411 7 416 418 594 72.0 1e-170 MDYKTYDPDLWNAIAREEERQENNLELIASENVVSKAVMAAQGSILTNKYAEGYPGKRYY GGCEFIDIVENLAIDRAKELFGAKFANVQAHSGSQANTAAYLSLVEPGDTILGMDLSAGG HLTHGSPVNFSGKTYNFVSYGVDPSTEVIDYDVVRILAREHRPKLIVAGASAYSRTIDFK RFREIADEVDAKLMVDMAHIAGLVASGLHPNPVPYADIVTSTTHKTLRGPRGGLILTNSE ELAKKVNSSIFPGIQGGPLEHVIAGKAAAFKEALDPSFAEYSQQVIANAQAMTKVFNQAP EARLISGATDNHLLLIEVTGFGLNGKEAEAILDSVNITVNKNSIPFEQLSPFKTSGIRIG TPAITSRGFKEEDAVEVAKLIVQVLKDPENTAVHDEVKAAVAALTKKYPLYN >gi|237663595|gb|GG668923.1| GENE 382 336185 - 336814 909 209 aa, chain + ## HITS:1 COG:SP0745 KEGG:ns NR:ns ## COG: SP0745 COG0035 # Protein_GI_number: 15900640 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 209 1 209 209 333 78.0 1e-91 MGKFQVIDHPLIQHKLTMIREKNCGTKVFREVVNEIAMLMAYEVSRDMPLEDVVIETPMG KSTQKTLSGKKVAIIPILRAGIGMVDGILELIPAAKVGHVGLYRDEETLQPHEYFVKLPE DIASRQLFVVDPMLATGGSAIMAIDSLKERGASNIKFVCLVAVPEGVKALQEAHPDVDIY TAALDERLNEDGYIVPGLGDAGDRLFGTK >gi|237663595|gb|GG668923.1| GENE 383 336920 - 337192 283 90 aa, chain + ## HITS:1 COG:no KEGG:EF2548 NR:ns ## KEGG: EF2548 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 90 1 90 90 175 98.0 5e-43 MKKNKKVLHAIAVIASVMSVLMYVSYIPQIYGNLHGEKGNPTQPLVAMINCIFWTIHGLY GDDGETRDKSIIFANVPGIIFGFFAFITAL >gi|237663595|gb|GG668923.1| GENE 384 337266 - 337502 234 78 aa, chain - ## HITS:1 COG:no KEGG:EF2547 NR:ns ## KEGG: EF2547 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 78 1 78 78 134 100.0 2e-30 MSNFNGMVTPVVPSDAGKDFAVDTHVTFLVHGQPQTGVVTKQLKNAAVVEIDETQKNNHL MVHSNGVIVINYKQLKKI >gi|237663595|gb|GG668923.1| GENE 385 337783 - 338109 310 108 aa, chain - ## HITS:1 COG:L54406 KEGG:ns NR:ns ## COG: L54406 COG4392 # Protein_GI_number: 15673594 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 1 105 1 105 108 105 67.0 2e-23 MPSSEYLFLTILGCTVATWLSRILPFLLLKKISLPQKLLEYLSFVPIVIMSALWFSSLFE QRIGHLPSLNLPYLFASFPTILAAILTKNLLLIVLVGIASFALIQNFI >gi|237663595|gb|GG668923.1| GENE 386 338096 - 338803 740 235 aa, chain - ## HITS:1 COG:L54719 KEGG:ns NR:ns ## COG: L54719 COG1296 # Protein_GI_number: 15673595 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Lactococcus lactis # 1 235 1 235 235 243 60.0 3e-64 MNHQLDARTGIREALPTVFGYIGIGIAFGIVGQAAGFSPLIVSAMSFFIFAGSAQFVTVS MLTGGSPILSIVLATFLVNARMILMGMTIAPYFKAESLGKNLWLGTLLTDESFALGMNKL NHTKGRLSFEWFNAANLISYATWVFSTIIGAYLGRFIANPQALGLEFAVVAMFIGLLYLQ IISDRSMKIALQLIMVLITFGLMSIGLIFIPSNLIVLVVTLIGCGIGVMIKHAFF >gi|237663595|gb|GG668923.1| GENE 387 338800 - 338901 138 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKTLIRSLCLIIEGLDFQTHVFKFYTERRKKRE >gi|237663595|gb|GG668923.1| GENE 388 339017 - 339568 549 183 aa, chain + ## HITS:1 COG:BH2909 KEGG:ns NR:ns ## COG: BH2909 COG1396 # Protein_GI_number: 15615472 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 7 173 10 174 189 135 40.0 4e-32 MEINTIIGNNLKKIRQEKKLTLDELAGITGVSKGMLSQIEKGTTNPTINTIWKISNGLNV PYTYLLEDDYVKENPVVKKTETVTQHSEDHSYRVFNYYSDNQKRNFELFQFELDSGKKYQ AVGHSKRSIEYVMVIQGTLALEVGDQRYLLPKDAAMYFDANQVHTYINEGTEQVQAVVIN YYT >gi|237663595|gb|GG668923.1| GENE 389 339681 - 341012 779 443 aa, chain + ## HITS:1 COG:no KEGG:EF2507 NR:ns ## KEGG: EF2507 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 443 1 443 443 658 98.0 0 MNKKIESLGNTALSLLSNTIIVVPYLLYIQLSDGHNLLTILPFVLFYTLRMTGIFLVRGI NLSLTSLGLLKISLLLGLAGSLIGTAGAFSFPLYSISGMLLGLSGALLPPSNQSIRFFLK EEGQKISHSNLLTTVLLTAVLFGALFFKATEIGLALLVYALYFLLALVAIKSYPVSLNEL EEESAEVSRKELILFIIFFVLLLLLRSGRLLTNAVEFDYAIVGACCFFVVAVLFVSHYGK RGAYKVSLEMNLATLINGIVGNYLFLFGSIYVAGVYGRAHMGIYLYLPYVLGMIFAMIAA SKTKQWSNNIPMVGLAGSLGILLLTSWTILGLFLLSFFKSTLNSFLARRYYQETDLPKDS RILIKYTTQTKGSLFHQFILMALMLVTVVGKGGTTQFLLELTGGKGISMQTSQFLTFIKN SNSLLVLLFIAVYFVVVFRQKKR >gi|237663595|gb|GG668923.1| GENE 390 341389 - 341595 272 68 aa, chain + ## HITS:1 COG:no KEGG:EF2505 NR:ns ## KEGG: EF2505 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 68 9 76 1651 82 97.0 6e-15 MMLSILLAQNFGFAVNAYAVTTTEAQTETTDTAKKEAELSNSTPSLPLATTTTSEMKQPT ATTESQTT >gi|237663595|gb|GG668923.1| GENE 391 341728 - 344616 2960 962 aa, chain + ## HITS:1 COG:lin2282 KEGG:ns NR:ns ## COG: lin2282 COG4932 # Protein_GI_number: 16801346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Listeria innocua # 622 952 799 1148 1806 70 26.0 2e-11 MSLAPIGGTEYSQTEVHRELNTTPVTATFQFAVGNTGYAPGSVYTVQLPEHLGYSTVSGE VTGIGATWAVDAATKTLSITFNQRVSDTSFKVELKSYLTTEAEPLIKIETPGKNKKTYSF DLYEQVEPIQYNERTRTTGLDGEIFYNLDRTLTGNQTLELLTTETPGAVFGKQDNLEPQV FSYDVDINGQILPETQTLLTPGKDYTLSDNSLGRIAVTVPNMNQQKAYSLSINRTIYLES ASDYNYLYSQQYPTTKIGSISLKSTTGTKQTTDFTAKTSQTSKVIADREMRSMSYISFQS KGKYYVTIYGTLTETKVGQQIVLESTNGQEIKNPKFTAYGPLYENVKLEDYFDIKTEGGK LTLTATKDSYLRINISDLTMDFDKKDINLSLSTPVIGPNKAIQLVSDQYIEPISVVNPLN AETAWGNYDQNGAYSSRTTVSVMGSKEKPIQNLEIKVKHPNYLSLRATKEIYFYYKLGTD YTVTPTSDGSVIKFTTPITNEIQIPIGFNYVPDSLPKDKSIPVDTIPITMSAEGLTPVDT TVTTNSKRGSERTLQSSKNQFLVNARNDSFDSLSVRTKIPAGADVLFDIYDVSNDQVDSI YPQYWDRGYYFDKPMSPDSPGYPTITFDENTNSYTFDFGKTNKRYIIEYKNANGWIDVPT LYITGTAKEPQSNNNEGSASVSVQNEALDILSATQAANPTLKNVTKTTVTTKNIDNKTHR VKNPTIELTPKGTTNAQIDLNSITVKGVPENVYSLEKTTNGAKIIFKDYTLTENITIEYN TVSANAGQIYTETTIDSETLDQMSASKKKVATAPITLKFSEGDAEGIVYLATATFYTHNI EDENQAIAKVSFELIDNVTHTATEFTTDEKGQYSFDAIMTGDYTLRVTNVPQEYSVDEEY LTGKAIKLVKGDNQLKIPLTKTIDHSRLQVKDSTIYVGDSWKPEENFVSATDKTGQDVPL AS >gi|237663595|gb|GG668923.1| GENE 392 345758 - 346048 229 96 aa, chain + ## HITS:1 COG:no KEGG:EF2505 NR:ns ## KEGG: EF2505 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 96 1556 1651 1651 149 97.0 3e-35 MFSNETPRQLKTVATVHVIDRNPKPLPDKNENNQTSSSTNQTTIKSSQYVTHIVKPDKQG RYPKTGEQTNGLYRVLGLVVLLIVIISGIVIKKKRK >gi|237663595|gb|GG668923.1| GENE 393 346245 - 346946 554 233 aa, chain + ## HITS:1 COG:no KEGG:EF2504 NR:ns ## KEGG: EF2504 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 233 1 233 233 422 98.0 1e-117 MNQRTIYYGSIGTALFLSSGMLIASVNSYANEVTTPGKYTVTYEVDGKIETATITVKENQ TELKLKDTFVGVNQAWSPLDNVVFLKDKEGRPLNLENVIIENNVNTQKVGLYFVTFRYES YLSIAKVYVNPTNFAAEGNMLAELPYSQAMIGPERPIIASRQDKEQQTKQEKKKNKIEQE RVNKKVLLNDELLKKIDTIAPVEITGGAASGSSQFGTTLSFLSGSLLYGTRRV >gi|237663595|gb|GG668923.1| GENE 394 346947 - 348383 1122 478 aa, chain + ## HITS:1 COG:no KEGG:EF2503 NR:ns ## KEGG: EF2503 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 478 1 478 478 856 98.0 0 MEFLLLDDRENLKLAIIRKLEQQYSFSERKDRLCKQLAISPYLLERNITEINADLQRFGL INEMEISEKNNEILLSQSLSISSSIIEEYYLKDSLEFNLLKTIFFHQFTSIKKYGEKHGM SRTVVYKIVDHIRKELGQYGIKLSKNLQLSGNEMAIRQYFTMLYYRIYKDSEEVYNQTDL CAVNQLLAQLKGSYENITNFHLFKHYVLVALERTQRKANYFLSQEENPFAFDEESSIYQE IQCWINEVMKATHAEKNAEIQGIIGNLSVYQSELISEHLLSSHNEAITATKTLFFSYIPF TISEEEFYQEIVPIIYQHRFITPFIDITLRIMDLEFFQERYPIVFDSCRQFLFALDCSAF EFSKLSLFFDLLLVLSRLYDQRNEKSTINLYVNFTQGEKYTQFIKEQIKIFESFSIHFHS AIRPDTDLVVSDYLPKTLFSVKCLIWLAPPRASDWQNFGNEIVRINKELQQTKQRKSE >gi|237663595|gb|GG668923.1| GENE 395 348666 - 348746 155 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKFLKISLVSVILLLILTSCVIVRM >gi|237663595|gb|GG668923.1| GENE 396 348751 - 349194 439 147 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519776|ref|ZP_03949825.1| ## NR: gi|227519776|ref|ZP_03949825.1| hypothetical protein HMPREF0348_2759 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis X98] hypothetical protein HMPREF0348_2759 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis X98] hypothetical protein HMPREF9503_01924 [Enterococcus faecalis TX0043] hypothetical protein HMPREF9519_02500 [Enterococcus faecalis TX1346] # 1 147 1 147 147 265 100.0 6e-70 MKKNIWLSVLALLILTGCKININSPQSARDDNYGETTQASTSINEVDDKLAGTMFSKKGS GDDVFTNLAFKKGPVIANITFKGTEKIVVRIVDSDGQEIAKLIDTQGNYIGKTMAQIPKD ADTYILEIKAEGSWSIQFSEANTKANQ >gi|237663595|gb|GG668923.1| GENE 397 349403 - 350590 1158 395 aa, chain + ## HITS:1 COG:L115706 KEGG:ns NR:ns ## COG: L115706 COG0772 # Protein_GI_number: 15672878 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Lactococcus lactis # 3 386 5 388 414 380 53.0 1e-105 MNRKEKTNLDSRIDYGVILPVFLLSLIGMLSLYVALYNDPSKPKIGSLLMKQGLWYLVGG LSIVIIMHFSSKLLWRLTPVFYALGLVLMGLLLKFYDPVLAEQTGSKNWIRFGGTTFQPS ELMKIAFILMLAYIVTMHNVKYVDRTLKSDFWLIAKMLLVAIPVIVLVLLQKDFGTMLVF LAIFGGVFLMSGITWKIIVPAFIIAALVGAGTIYLVTTETGRDLLSKIGIKAYQFDRIDL WLNPFHTDPDRSFQPALALTAIGSGGLFGKGFNVSDVYVPVRESDMIFTVVGENFGFIGG CFIILLYFILIYRMIRVCFDTNNEFYAYIATGIIMMILFHVFENIGANIGLLPLTGIPLP FISQGGSSILGNMIGVGLIMSMRYQQETVRTRSGR >gi|237663595|gb|GG668923.1| GENE 398 350615 - 350974 423 119 aa, chain + ## HITS:1 COG:lin2520 KEGG:ns NR:ns ## COG: lin2520 COG1393 # Protein_GI_number: 16801582 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Listeria innocua # 1 115 1 114 117 132 56.0 1e-31 MYTLYEYPKCSTCKKAKAWLDQQGVKYQAIDIKATPPSSEQLAKWMKETGLPVRRFFNTS GVLYREQGLKDLVDSFSIEEASQRLAADGMLIKRPILLKDNTFLTNGFKEADYEGVLGK >gi|237663595|gb|GG668923.1| GENE 399 350971 - 351294 547 107 aa, chain + ## HITS:1 COG:lin2519 KEGG:ns NR:ns ## COG: lin2519 COG0509 # Protein_GI_number: 16801581 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Listeria innocua # 11 107 15 114 125 72 40.0 2e-13 MSEMKQIDQLWILPTEAGYKIGLTAEAQEDLGKITFATFPKVGQTLAKGDSLIELEAEKA VSEFSSPLSGKVVAINEAADQEPSALDEENAWIAVLADVEPTEFENL >gi|237663595|gb|GG668923.1| GENE 400 351709 - 352746 1342 345 aa, chain + ## HITS:1 COG:lin2514 KEGG:ns NR:ns ## COG: lin2514 COG1135 # Protein_GI_number: 16801576 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Listeria innocua # 3 342 1 338 340 386 58.0 1e-107 MALIELRHVKKEFSGKAGKVTALKDIDLTVESGDIYGIIGYSGAGKSTLVRLLNGLETPT EGEVEIQGQDIALLPNKELRNFRKKIGMIFQHFNLLWSRTVLENIMLPLEIAGVPKQNRK SRAEELIKLVGLEGRETAYPSQLSGGQKQRVGIARALANNPDILLCDEATSALDPQTTDE VLELLLKINQELNLTVVLITHEMHVIRKICNRVAVMEYGEIVEEGKVIDIFKKPQTEIAK RFIQQEADKNIEETELVVEEMLEQYPNGKIVRLLFHGEQAKLPIISHIVQEYQVEVSIIQ GNIQQTKQGAVGSLYIQLLGEEQNILAAIEGLRKLRVETEVIGNE >gi|237663595|gb|GG668923.1| GENE 401 352739 - 353425 807 228 aa, chain + ## HITS:1 COG:BH3480 KEGG:ns NR:ns ## COG: BH3480 COG2011 # Protein_GI_number: 15616042 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Bacillus halodurans # 20 228 10 218 218 220 61.0 2e-57 MNNRGLASFFDFSQIDISKLQEKTIETLYMTGISIIVVAILGLILGLLLFETSGRKGILS RLLYWLVAIFVNIFRSIPFIILIVLLIPFTKIILGSMSGVKGSLPALIISAAPFYARMVE IAFREVDKGVIEAAKAMGANRFQIIWKVLLPESLPALVSGLTVTTISLVGYTAMAAAIGA GGLGSLAYQDGFQRGQNTVTLVATICILIIVFAIQWLGDTVAKKIDKR >gi|237663595|gb|GG668923.1| GENE 402 353440 - 354258 1103 272 aa, chain + ## HITS:1 COG:lin2512 KEGG:ns NR:ns ## COG: lin2512 COG1464 # Protein_GI_number: 16801574 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Listeria innocua # 3 272 2 276 276 283 53.0 2e-76 MKKRTLWSVITVAVAVLVLGACGNKKSDDSVLKVGASPVPHAEILEHVKPLLEKEGVKLE VTTYTDYVLPNKALESGDIDANYFQHVPFFNEAVKENDYDFVNAGAIHLEPVGLYSKKYK SLQEIPDGSTIYVSSSVSDWPRVLTILEDAGLITLKEGVDRTTATFDDIDKNTKKLKFNH ESDPAIMTTLYDNEEGAAVLINSNFAVDQGLNPKKDAIALEKESSPYANIIAVRKEDENN ENVKKLVKVLRSKEVQDWITKKWNGAIVPVNE >gi|237663595|gb|GG668923.1| GENE 403 354606 - 355421 731 271 aa, chain + ## HITS:1 COG:lin1352 KEGG:ns NR:ns ## COG: lin1352 COG0020 # Protein_GI_number: 16800420 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Listeria innocua # 26 259 23 252 252 316 63.0 3e-86 MLRFFPQKNKYVEEASQYAFDKEGQIPQHIAIIMDGNGRWAQNRRLPRIAGHKEGMDTVK KITKHASHLGVKVLTLYAFSTENWKRPTDEVNFLMQLPVDFFDTFVPELIKENVKVNVMG YQEFLPSHTQDAVKRAIEQTKDNTGMVLNFALNYGARAELLTAMKQIAAEVSEKAYTADE ITEETIADHLMTGFLPTELRDPELLIRTSGEERISNFLLWQIAYSELFFTKALWPDFSGD TLETAIASFQNRNRRFGGLKETTETEGSDPQ >gi|237663595|gb|GG668923.1| GENE 404 355418 - 356218 954 266 aa, chain + ## HITS:1 COG:SPy1964 KEGG:ns NR:ns ## COG: SPy1964 COG0575 # Protein_GI_number: 15675762 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 266 1 264 264 241 52.0 7e-64 MRQRVITAIVALIIFIPIIWYGGFAIEIAAVALAVVGVYELFRMKGLTLLSFEGVLSALG AVFLVIPTIKWLNFLPEMQTNFILFYVTVMLLLGASVISKNTYTIEEAGFPVIVSLYVGM GFQNFISARSAGFEVLLFALFIVWATDIGAYLFGRRFGRHKLMPDVSPNKTIEGALGGIL SAVVVAALFLVFTANKGLFPYPMPVMLVLTVLFSIVGQFGDLVESSIKRHYGVKDSGNIL PGHGGILDRFDSLLFVFPIMHLCGLF >gi|237663595|gb|GG668923.1| GENE 405 356692 - 357861 781 389 aa, chain + ## HITS:1 COG:BS_tagF_2 KEGG:ns NR:ns ## COG: BS_tagF_2 COG1887 # Protein_GI_number: 16080625 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC # Organism: Bacillus subtilis # 7 388 2 385 387 351 45.0 2e-96 MKKFLEKSIHQAIKACFFILGKLPKKKLFIFESFHGRQYSDNPRAIFEYIRDNCPEYQCI WAVKKGYEMPFVEENVPFIKRLSWRWLWVMPRAQYWVFNTRIPAWMYKNQTTIYIQTWHG TPLKKLGLDIETVKMPEHETESYKLEVIQEAKRWDYLISPNAYSTRVFRQAFHYEGKILE VGYPRNDLLVCENKDKIAFSVCNQLGLSANQKIILYAPTWRDDESIRKGAYRFTNHLPVE QLLEIDPSIVVLTRLHYLIAESFDISAFGSRVIDVSSYPDINQLYLIADLLITDYSSVMF DFALTKKPMLFFMYDKEKYQNSTRGFYFDPTAILPGKIVTDTDSLVTSVKNVLFSKTEQE QRLYMQFFREFCLENQDATRQLISEILKR >gi|237663595|gb|GG668923.1| GENE 406 357880 - 359346 899 488 aa, chain + ## HITS:1 COG:SA0248 KEGG:ns NR:ns ## COG: SA0248 COG0463 # Protein_GI_number: 15925961 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Staphylococcus aureus N315 # 43 316 3 268 573 94 27.0 7e-19 MENQKEVQKEYEEYQYMLDNETWKKELSQFKLFSSKKISKNPKVSIIIANYNNAPYLKKM MDSLVQQTIGIEQLQVMFIDDCSTDHSLKVIEPYLERYPNIEIYQLLENTGGAHGPRNVG IVNARGEYSVFLDADDWYDLNALKYLSDLLDDSHDDFAVSGLIQSADGHLMLKSKPYYMD GSFKNRSIQELPAEFYGWLGPQAIMLRTSLIHNNNLHFVNQRVADDVLFFYEAMRFSKTI TQGERLTTYLNRDADNESLSKSINRTFMLSWLRALSYINQQFPDDLSKERMLARRLEWLI YDFCIRRDTGYPFSKKRLQDFKVQMDQYLGELSFDPSPYFRSDVRQIIWTFLQTNDIDGL YWFIQCQSIRWVLVNRFGYVSKTEKSYYYPRLLKRFPAVRMNAYAEATQREGNTLSLNVY THQKITGFEIKELKNPFETRQRLAFKKISETSYQVELPEKFSNKESRFTIVFDNYLEIGV KDFSKFFA >gi|237663595|gb|GG668923.1| GENE 407 359415 - 361925 2464 836 aa, chain + ## HITS:1 COG:BS_yveT KEGG:ns NR:ns ## COG: BS_yveT COG0463 # Protein_GI_number: 16080481 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 6 226 5 223 344 136 34.0 1e-31 MENVKVSVIVPVYNVETYLEEALMSLKNQTLKEIEFLIINDGSTDNSQKIIEEIAQDDPR FRVFNVKNGGIGKAFNLGVSEAKGEYIAEFESDDYVALHAYERLYNTAKSHHADVVRCNW VEFSSEEEVERDILWQHPDKYNQLIDLKTTDLIVQVYPWNAIYKKSMIEKENVTWDEEIK SYGDTGLFWKINSASQNVIFIKDCLYFYRQDNPNSTVNNVATKVPFLFQQFKLIRSNLIE QNKFERYKGYFYKQMFEKYFWAIEKLTHLRDESVYEVIQKVAVDFKQAIEIDQLNDIDFE YIKQFYQIANDPVAYYEDYLKNLYKVSVVMPIHNASKYLRQTLENVCEQSLREIEIILVE NGSTDNTMDIINEFAVKDPRIMGISIGKSNPGHARNVGISMARGRYLQFLDADDHFEVNL LQDAYYRAYDSATDILLFGMKEKLPNGEVHVVHNPLLTNGGRMSGEEISLDEVTPYLYDK LFLLEYIKENNLVNLEQFVGEDAYFTYTALLGTEKIVALNKYLLTRIVRQDGLMSTYGMN YRDEFNLHDKMLEYLKQHAPNRIEAYRLKIINTLNWFIFDMNRVDQAFKERFYQELKEKY IQQLGLDLVKKEKYSNDPEQVERITRIQNILQYNLEIYQNIYKDFGMKKTFIIPNVHIQE RGGKVIFGQEKAHGNGTAIEMFSIIIADNDTSNASGVIDFVYMGDNTKIIHDSLLVSLLI KKEGTTLKSIVLQAEWEKGYTLLQENMYYTFVDNVFTIWAGYTQKYAAFDYNVRILTSRE GETHFSVVRQNQGYIQDTMTSIGNELTPINKIEGNEPTTIKKAVSKSLKKAKGLLK >gi|237663595|gb|GG668923.1| GENE 408 361993 - 364446 2373 817 aa, chain + ## HITS:1 COG:SPy1101 KEGG:ns NR:ns ## COG: SPy1101 COG0812 # Protein_GI_number: 15675084 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Streptococcus pyogenes M1 GAS # 518 809 1 295 295 219 41.0 1e-56 MKKAAIMGWWYNQNYGSILTYYALNKYVQNKGYETVMIDGPLGYKNRSNFRAWMPLAYNF FKKNNMPYTEQLTKETLPTLNDLENLDTFILGSDQMWNPWNGWVDDDDFLDFVYPRNKTI AYSVSLGKADTSKYDPKWVANRKKDITQFNHVSMREDFSVQIMKDIFQEEVIQALDPTYL VERSEYDSLAYQATFKRQESGDYMAVFFLDINKEKVRVALAIAEKLGLKLVVLPNPLKGR ELAKKTFPNTVEYVSEDTPENFLAVYREAKYIITDSFHGTVFATIFQKPFSIFYNEQRGI DRFNSLMNLFELGETRRVYEQNTKQEIEENKNISLALDYQKTAGKIAREKEISDKWLTDA LTSKFSPDEDEVYDEFRRYIINKPLDFYRAKTTVPISAAIILSPNGTIKNSNPNESFWKL TDKELIFMNNHREVTTRFNREKFKGKETFSPFRIVGKYVKDEKIEHVMYLHPIQKPKPKP KQGTEKKALAIPENLLTRKQLIMKIVQNKRIRSWKQDLLEELPDLELFVGRELKEYASNF VGGPADLLIFPKTIEEVALIVKYAKNNQIPLTVIGKGSNILVRDGGIRGITLNMTALNYR KITGNVLTVSAGASLIETSYYLLEHLKCGLEWADNIPGTIGGAVYMNAGTVKDINSMFLE ATIVDENGEIKVLNKEDVQFSHRYSSFMDHPEWIILETKLQISEGNLENMVNDMVGTVEI RERMHPLTHPNHGSTFTWGRAPRLIQQAGLVGTRIGGVKVSEKHPGFFINVEQASAQDYE ALIYLIIAKVYEFSGFLLKPEVRILGANMWEASLTFK >gi|237663595|gb|GG668923.1| GENE 409 364464 - 364862 476 132 aa, chain + ## HITS:1 COG:no KEGG:EF2488 NR:ns ## KEGG: EF2488 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 132 1 132 132 218 99.0 8e-56 MKKIITIIVSLAIGIGCGFWSGYYISKKYSENQETTISKSTNSEQPLIANGEYQVTANWD WKTLVVKDNVWTLDGKRIYDVSTTNDNIVILKGKNLKSLVVYKIEKDNEKINLYSYTKEG VGKKVLATLVKK >gi|237663595|gb|GG668923.1| GENE 410 364921 - 366060 1257 379 aa, chain + ## HITS:1 COG:glf KEGG:ns NR:ns ## COG: glf COG0562 # Protein_GI_number: 16129976 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-galactopyranose mutase # Organism: Escherichia coli K12 # 8 370 2 360 367 426 60.0 1e-119 MKYNTKNYDYLIVGSGPFGATFACEAAKRGKKVLVIEKRAHIGGNMYTHKENGINVHDYG AHIFHTDNKEVWSYVNELTEFNGYINQVVANYKGELYNLPFNMNTFYQMWGVKTPAEAQA KISEQREAAGIKGAPKNLEEQAIRLIGTDIYEKLIKGYTEKQWGRKATELPSFIIRRLPT RFTFDNNYFNHRYQGVPVDGYTAMFDKLLESELIDIQLNKDFLAEKETYLSEFPKIVYTG MIDAFFDYSYGELEYRSVRFENETVDSNNAQGNAVINYTDAETPYTRIMEWRHFDQKADE NKTILTKEYPQDWDRSKEAYYPVNDEKNSLLFRKYKEKANAQEKVIFGGRLANYQYYDMD QVFGAALKAVAKEFGEMAN >gi|237663595|gb|GG668923.1| GENE 411 366086 - 367429 1113 447 aa, chain + ## HITS:1 COG:L137446_1 KEGG:ns NR:ns ## COG: L137446_1 COG1134 # Protein_GI_number: 15672897 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Lactococcus lactis # 4 340 5 341 350 311 46.0 1e-84 MEKELKVRTKLLTKEYSLAQTRIDKLKTLFSIFQNKVPTFWALKGVSLDVYSGETIGIIG LNGSGKSTLSNIISGITPQTSGELEINGEVSIISIGAGLNNNLTGRENIRMKCLMLGEKN KEIDAKIDDIIEFSELGVFIDQPVKTYSSGMRAKLGFSIAVHQNPDILVIDEALSVGDQT FYNKGLKKMLAFKEQGKTIFFVSHSIQQVEQICDRVAWMHYGDLRAFGETKHILKEYRAF LHRYNHFTEPQKESYQRDGKAKQRNFSLEQLQETILEKANQQVGSRRTTKEVIKFTTKNK IGDKMTLGTKSLLILLLCMIFYVSLTFVKGISLTTAFIHPAETIQRIFVPEKVAGKDTNA VKTTKTKPASTKESRQQEEVQPSSTNVPENNNSEQAVSTYTVEVGDSVSFIAENHGLTIE QLQTLNPEIIEVPIYPGQVLKLKEVTE >gi|237663595|gb|GG668923.1| GENE 412 367429 - 368241 701 270 aa, chain + ## HITS:1 COG:lin1062 KEGG:ns NR:ns ## COG: lin1062 COG1682 # Protein_GI_number: 16800131 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Listeria innocua # 1 270 1 267 267 219 46.0 4e-57 MREVKLILAEQFSYLGVAQRIAKYSNKALYQSHILGNLWQILSPLIQLGVYYFAFGIALG GARTVKGGVSYIAWLMVGLSTWIFLSTVTKQASSSVYMQVGMVSRMKFPISILPMVKIFS ELPSYFAFTTLAAIVSISTGEKISIYWIQLPYYIVAMIIFLYSFSLINSTIAALIRDYQI FLNSIIQVLMYMSGVFWDLSTKNLPSWLSKILMLNPYAYIINGFRDTFFYKRWFFEDKPQ LVVFWLTTLVIFIVGAHLHVKFRSKFVDYM >gi|237663595|gb|GG668923.1| GENE 413 368904 - 369554 749 216 aa, chain + ## HITS:1 COG:AF0720 KEGG:ns NR:ns ## COG: AF0720 COG2102 # Protein_GI_number: 11498327 # Func_class: R General function prediction only # Function: Predicted ATPases of PP-loop superfamily # Organism: Archaeoglobus fulgidus # 8 215 12 210 214 119 32.0 6e-27 MKKFCLSYSSGKDCLLAMDRLIQAGNQPVALVTTLSDEINRSWFHGIPISVLEAAAEALD LPLVISHNNETNYTEKVVEALHETQKLGAETVCFGDIDIEQNGAWDRQVALSAGLEPQLP LWQENREALVKEFLAKGYTAIIKTVSKEAGIPIKFLGEPLDETFITYLKEHQLDVCGENG EYHTLVIDGPLFKKRLNYYTSGIYESPYAYSLIIDA >gi|237663595|gb|GG668923.1| GENE 414 369642 - 369758 221 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEETVFFNLGNALASKRDQKELIKEAQIAKDSRKTDYR >gi|237663595|gb|GG668923.1| GENE 415 369724 - 369858 161 44 aa, chain + ## HITS:1 COG:no KEGG:EF2483 NR:ns ## KEGG: EF2483 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 2 44 33 75 75 69 100.0 5e-11 MRKIPGKLIIVEDEENGTHILFELADQTEPSAETKEFKVKKVID >gi|237663595|gb|GG668923.1| GENE 416 370063 - 370794 585 243 aa, chain + ## HITS:1 COG:SA0513 KEGG:ns NR:ns ## COG: SA0513 COG0546 # Protein_GI_number: 15926233 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Staphylococcus aureus N315 # 6 205 4 202 227 63 25.0 2e-10 MENRGILFDKDGTCIRFDTLCQAGLKACFETLSMLAPHHSAEIKKILAIQEQRFLQKHLL DEVLYQELYQELAQFEELVEQGISSRWLEQFFYDYLRKNLKKIEPIGDLKQLFLELKRKN YKIGLATSDTLPATMLIMEYLGLTEMFDFIATGDRYLPKPDAAMLQAFCQSCQLKPTEVI MVGDSLVDVFMGTCHGKAGIGVLTGNCQSTDFEKFEVAYFRDIHEIPYQELWENTKNKKI LKR >gi|237663595|gb|GG668923.1| GENE 417 371016 - 372098 1012 360 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227519798|ref|ZP_03949847.1| ## NR: gi|227519798|ref|ZP_03949847.1| hypothetical protein HMPREF0348_2781 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_2781 [Enterococcus faecalis TX0104] # 1 358 1 358 358 672 100.0 0 MKSMCELCDLNPGKIITFDNHGICKHCAEHLELKPKEIKDRTMESIIKRQEEIIKKDQAM QAKGNLCYLCEEETGKYFTSDFYRVGKSCLKKLKVSTWSVDKKSLADLQQIQELINKQSE IAKANEKNAEVYGNLCALCQDNKGKYLTSDNYQICKKCAGQLGVQGQGYTQTWTLTDLRN VQEDNRLFNPTTTIAGSIEFDEPEKKFRLVGSSKILPVSIIADYKILEKKNTHFTEENVP YDRVSSVYILINLDDLQRPTITISFLKTLSEQTTEFDRQLAIDRARFNAERALSSLDTIV RRIKEKEIPTPIKSDENQPIEPKLSDSQKNSPSAIEDVMAELRNLKLLVDEGILTEEESS >gi|237663595|gb|GG668923.1| GENE 418 372219 - 372881 742 220 aa, chain - ## HITS:1 COG:no KEGG:cpfrc_00619 NR:ns ## KEGG: cpfrc_00619 # Name: not_defined # Def: hypothetical protein # Organism: C.pseudotuberculosis # Pathway: not_defined # 96 219 69 191 193 132 62.0 8e-30 MKKNISGNSSIKKPFYKKVWFWVVVVVVLAIGGSGMGKEEKKATSSPTKETSQSTKNSSS SSSKEVKTSTSTKEIKTSQSKENSFVSKVKEKMSEAASEADKKKAETPETKPSEEAAPDV PREYKSALKKAQSYAKIMSMSKAGIYDQLTSEYGEKFTPEAGQYAIDHLEADWNANALKK AKDYQENMDMSPDAIRDQLTSEYGEKFTPEEAEYAIQNLN >gi|237663595|gb|GG668923.1| GENE 419 373077 - 373886 771 269 aa, chain - ## HITS:1 COG:L188985 KEGG:ns NR:ns ## COG: L188985 COG1512 # Protein_GI_number: 15673333 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Lactococcus lactis # 21 252 22 260 261 128 36.0 1e-29 MKKRLLPIFFLILLAFGLALPVSAAENSIDDGAQLLTPDQINQLKQEIQPLEEKTKASVF IVTTNNNTYGDEQDYADHYLLNKVGKDQNAILFLIDMDLRKVYISTSGNMIDYMTDARID DTLDKVMDGMSQGNYFAAAQTFVQETQAFVDKGVPGGHYRVDSETGKITRYKVITPLEMV IAFAAALILSLVFLGINISKYQLKFSSYQYPFREKTTLKLTSRTDQLTNSFITTRRIPKN NGGSDGMGGGGSTTHSTGGGTFGGGGRSF >gi|237663595|gb|GG668923.1| GENE 420 373883 - 375028 948 381 aa, chain - ## HITS:1 COG:no KEGG:EF2478 NR:ns ## KEGG: EF2478 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 381 1 381 381 716 99.0 0 METTFTHKCPNCGGPLLFNPKDQKFHCEYCLNIYTEEEVTRYEQQQHEAHLENPSTTTAE ENLTFTAEEESSATQQTETTENETTADAGTMEIFNCPSCGAQIVTDATTAATYCYYCHNP VVLAGRLSGEFLPENVLPFTIEKDEAIEKFLAWTKKKWFIPRDFFSKNQIDKLTGVYFPY WVVDAEVDGQLQATGTSIRIWRVGDIEYTETKRFNVGRSGKLSFKELVKNALSKNVQQKM VEGVQPFLIDQAVPFKSQYLAGFQAEKRDIEYEAIKKHVQQELQDYSESLLRDSASGYTT LTNVRTDISLDQENNHYMLLPIWLVTYRSQEQSKKVYYYAMNGQTGKVSGVLPISYTRLG LATLGIFAGLLALFLLGGYFL >gi|237663595|gb|GG668923.1| GENE 421 375122 - 376354 1152 410 aa, chain - ## HITS:1 COG:L186490 KEGG:ns NR:ns ## COG: L186490 COG4260 # Protein_GI_number: 15673331 # Func_class: S Function unknown # Function: Putative virion core protein (lumpy skin disease virus) # Organism: Lactococcus lactis # 15 405 1 384 389 566 69.0 1e-161 MGLIKAATSSVGGGLADQWLEVIEPDNMGDTTVMTKGVFVRKDDKRGSNRKGTDDVLTDG SVVHVYPNMMMLLVDGGKIIDYTAEEGYYTVKNDSAPSMFNGSLKDAIAETFSRFKFGGV TPQKQQVFYINLQEIKGIKFGTPAPLNYFDNFYNAELFLRAHGNYSIKITDPLLFYTNAI PKNQTQVDINDINEQYLAEFITALQAAINQMSADGQRISYVPSKSVELSKYMQTALDEDW RTNRGMEIVSVAVASISYTDDSTKLINMRNEGAMLSDPGVREGYVQGSLARGMEAAGKNE GGAMSGFMGVGMGMNANGNYFAQASQTNQQQMQEKQNQQNAQGSTDTWTCPQCGTENTGK FCSNCGTPKPTNEKPKLEMKCSECSEIVDLSNGIPKFCPHCGKPFQGVPL >gi|237663595|gb|GG668923.1| GENE 422 376562 - 378604 2320 680 aa, chain + ## HITS:1 COG:lin0461 KEGG:ns NR:ns ## COG: lin0461 COG0768 # Protein_GI_number: 16799537 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Listeria innocua # 1 675 1 676 678 570 48.0 1e-162 MERSNRNKKSSKKPLILGVSALVLIAAAGGGYYAYSQWQAKQELAEAKKTANTFLNVLSK QEFDKLPSVVQESSLKKNGYDTKSVVEKYQAIYSGIQAEGVKASDVQVKKAKDNQYTFTY KLSMSTPLGEMKDLSYQSSIAKKGDTYQISWKPSLIFPDMSGNDKISIQVDNAKRGEIVD RNGSGLAINKVFDEVGVVPGKLGSGAEKTANIKAFSDKFGVSVDEINQKLSQGWVQADSF VPITVASEPVTELPTGAATKDTESRYYPLGEAAAQLIGYTGTITAEDIEKNPELSSTGVI GKTGLERAFDKELRGQDGGSLVILDDKENVKKALQTKEKKDGQTIKLTIDSGVQQQAFAI FDKRPGSAVITDPQKGDLLATVSSPSYDPNKMANGISQKEYDAYNNNKDLPFTARFATGY APGSTFKTITGAIGLDAGTLKPDEELEINGLKWQKDKSWGGYFATRVKEASPVNLRTALV NSDNIYFAQQTLRMGEDKFRAGLNKFIFGEELDLPIAMTPAQISNEDKFNSEILLADTGY GQGQLLISPIQQATMYSVFQNNGTLVYPKLVLDKETKKKDNVISANAANTIATDLLGSVE DPSGYVYNMYNPNFSLAAKTGTAEIKDKQDTDGKENSFLLTLDRSNNKFLTMIMVENSGE NGSATDISKPLIDYLEATIK >gi|237663595|gb|GG668923.1| GENE 423 378684 - 379439 285 251 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase [Lactobacillus jensenii 269-3] # 55 238 2 185 380 114 39 4e-54 MKRLNCRRKGIRVRILAIDTSNQTLSIAVCENQKILGSYTATVKRNHSLTLMPAIDYLMS QLNLAPTAIDRFVVAEGPGSYTGLRLGVTTAKTLAYTLKKELVGISSLQTLAANCVGQTG LVVPLFDARRKNVYAGAYRFVDGVWQNELPDQHISLRELLEQLKNEPNLFFVGEDVEKFT EEIAQIIPHGEICDVPQWQIPNAAVLAALGSVAEPVENVHGFLPAYLKKVEAEENWLKTH TPNGESYVEKL >gi|237663595|gb|GG668923.1| GENE 424 379411 - 379965 290 184 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|58336726|ref|YP_193311.1| ribosomal protein ala-acetyltransferase [Lactobacillus acidophilus NCFM] # 5 182 1 179 190 116 36 2e-24 MEKAMWKNFNFVTKYFTKRRQRYITKTIAMNQQEFQLREITYQDIKDLLAIEREVYAGEL PWTMSAFMAELGSKAPHLYLLAAINGKTVGFIGCRIQGTDAHITNVAVHTEYQGLGLGRS LIEETRIFAKKNRCETLSLEVRMSNVKAQRLYRKIGFASQTVKKGYYDENNEDALEMIID LKEE >gi|237663595|gb|GG668923.1| GENE 425 379973 - 380437 196 154 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119946836|ref|YP_944516.1| ribosomal-protein-alanine acetyltransferase [Psychromonas ingrahamii 37] # 1 149 9 160 162 80 27 1e-13 MLVTKKEISVANIGEELWRFSNSSYTTGSPWTETQFAEDFAQENSEYLFLVENGQWLGYI AYHFILDEAEISHVVVNSQKQHQGIGCQLMKAFKEYVKSRDITQIFLEVRESNTLAQKLY EKTGFRKVAVRKNYYKEPQENAFVMCAKLRKEAQ >gi|237663595|gb|GG668923.1| GENE 426 380434 - 381480 715 348 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 10 319 518 834 860 280 47 3e-80 MTIFTKERKLLLAVESSCDETSVAVIEDGDKILSNIVASQIKSHQRFGGVVPEVASRHHV EQVTICIEEALTEAKVTPEELSGVAVTYGPGLVGALLIGLSAAKAFAWAHQLPLIPVNHM AGHIYAARFVAPLEFPLMALLVSGGHTELVYMKEDGSFEIVGETRDDAAGEAYDKVGRVL GLPYPSGKEIDALAHEGTDTYQFPRAMLKEDNYDFSFSGLKSAFINTVHNAEQRGEALST KDLAASFQASVVEVLVTKTIRACQEYPVKQLLIAGGVAANQGLREAMRHAISEQLPTVTL LIPPLKLCGDNAAMIGAAAFIEAEKNHFASYNLNAEPGVSFMTISEEG >gi|237663595|gb|GG668923.1| GENE 427 381799 - 383490 2139 563 aa, chain + ## HITS:1 COG:SPy2151 KEGG:ns NR:ns ## COG: SPy2151 COG0018 # Protein_GI_number: 15675893 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 563 1 563 563 723 62.0 0 MNNKEIVAKALHDVLNEELTMDQIEQLLENPKSVDHGDVAFPAFSLAKIYRKAPQQIAAE LAEKIDGTNFEKIEVVGPYLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMS SPNIAKPISMGHLRSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEE AVRQQPINELLRLYVQFHEEAEEKPELEDEARAWFKKLEEGDQEANELWKWFRSESLKEF DKIYSMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTENQGAEIVDLTEYNLNPALIRK SDGATLYITRDLAAALYRKRTYDFAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDMEHI PFGLITQGGKKLSTRKGKIVLLEEVLNEAVTLAGNQINEKNPDLANRDEVAKQVGVGAVI FHDLKNDRLNNFDFVLDEVVRFEGETGPYVQYTHARAMSILRKANFTPDATQRYALNDKD SWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYYAHVRILDEDDQKGARLAL VYAVATVLKEDLRLLGLHAPEEM >gi|237663595|gb|GG668923.1| GENE 428 383646 - 384146 584 166 aa, chain + ## HITS:1 COG:SPy0357 KEGG:ns NR:ns ## COG: SPy0357 COG1418 # Protein_GI_number: 15674508 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Streptococcus pyogenes M1 GAS # 5 157 3 150 166 178 64.0 5e-45 MTEKWREDEEYLSYVEDLLATEEVQKLAEYTQHMHSTRLEHSISVSYHSYKLAKRWNGNA RATARAGLLHDLFYYDWRTTKFDEGSHAYVHPRIAAKNAEKITELSDLERDIIIKHMWGA TIAPPKYKESYIVTFVDKYCAVKEAALPMTTAMKTKWRQYFGQQSI >gi|237663595|gb|GG668923.1| GENE 429 384228 - 384551 303 107 aa, chain - ## HITS:1 COG:no KEGG:EF2469 NR:ns ## KEGG: EF2469 # Name: not_defined # Def: Cro/CI family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 107 1 107 107 186 97.0 3e-46 MKENFLKQKRMEKNLTLEQVGNFVGVGKSTVRKWETGMIENMGRDKIVALSKVLDVSPLE ILGIPETEETPFVVPTNIMNVYKQLTTENQEAVYRYAQKKLTEQNYF >gi|237663595|gb|GG668923.1| GENE 430 384739 - 385017 175 92 aa, chain + ## HITS:1 COG:no KEGG:EF2467 NR:ns ## KEGG: EF2467 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 92 1 92 92 144 91.0 8e-34 MESNLIHSKLRMKGKNVEWLANEMTAYGQPISASTIYKKLKGEVVFKAADIKLISQLLDL KNEEIMTIFFSELVSKKTHVDIERIVMNEKNY >gi|237663595|gb|GG668923.1| GENE 431 385001 - 386608 1579 535 aa, chain + ## HITS:1 COG:BH0361 KEGG:ns NR:ns ## COG: BH0361 COG4932 # Protein_GI_number: 15612924 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Bacillus halodurans # 340 509 1183 1351 1661 134 44.0 5e-31 MKKIINKLFSLCLIIFIILGSNTSIISYAMDNESGQQIRSISVEYPENKTEIVATKDWAT VSLALSISELTKGEVLTLKMASEKYSYSMTPFEIGDALQVIPNDDGTWTIKALQTITDYS ANLQLKLRYNQNLSEDFEDQVVFTFGDSQKVAMINIGQYVEKVPETELVRKVPLGFTPEG RVAWVIYFNYNQAGLSGSEKTTFKFLDNVGPNQTLAVDSIAAYLTKQPILEVNGEMIRNL DHDEYSYDASQFFQKYASESGLNYEAEKFEGIPTTTGSYLSNKNAYYIYLETIPNENIPS DVLLSNYTYMRISNEGFDAWEDEDIAYITADENSGGTGQGGVILEKIDAETAEVLQGAIF KLVNKKTQQVIQENLRTNQSGQIRLAGLEPDQYELIEVKAPPGYKLDATPVSFEIKSGQT QTIRLKKENTRLENQLKVEKVDENNEAKRLAGAEFSLYDQKDNLIEKGVTNENGELLFSN LSPDGEYYLVETKAPNGYELDETKHPISFAGKADYTLTYRVKNTQQVQTGSILAS >gi|237663595|gb|GG668923.1| GENE 432 387089 - 388378 1144 429 aa, chain + ## HITS:1 COG:lin2282 KEGG:ns NR:ns ## COG: lin2282 COG4932 # Protein_GI_number: 16801346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Listeria innocua # 3 381 1286 1661 1806 134 28.0 3e-31 MTVTIDNVALRGNLKLVKQDGYSKQRLAGAQFRWRDTVNGNTGVVTANTNGEATLYNFSV NRIYEITEIKAPNGYILDKTVHRVLLPSNYAGKTYTFTKNNQAQKGAIKIVKQDGYTKQR LAGAQFKFRDTTNNYTATFTADRNGEVLIPGLAGDRIYEITEIKAPNGYIIDRRVHKVDL RGQGGKTYTLVLNNTSQQGAIKIIKQDTDTRKRLAGAKFRFRDTTNNYTATFTANGNGEV LIPGLSSDRIYEITEIQAPTGYALDRKVHRIDLRGQGTKTYTLVLNNKANYGAIKIIKQD VETKTRLAGAVFEWKDTTNGYTQRVTTGRDGTVTISGLSVNRVYEIREVQAPAGYSRNTM PTRVSLMQNHAGQTIAIVRENRRIPVYNPPPPTYWPYVPPITNYNPPVYYNPPRYYYGGC VMVIVVVCW >gi|237663595|gb|GG668923.1| GENE 433 388407 - 388550 206 47 aa, chain + ## HITS:1 COG:no KEGG:EF2465 NR:ns ## KEGG: EF2465 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 47 1 47 47 65 91.0 5e-10 MSQSALPKLGVISTGALFVTDLIGVILLSIVTSYILYRYFFKRGQIT >gi|237663595|gb|GG668923.1| GENE 434 388809 - 389798 852 329 aa, chain + ## HITS:1 COG:L95846 KEGG:ns NR:ns ## COG: L95846 COG1215 # Protein_GI_number: 15673247 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Lactococcus lactis # 9 328 490 810 824 117 27.0 2e-26 MMDSIAGPIQVLSRQFPNAQQGKGAALNHAFQIVLADAEKKDYSRNQILVGVVDADGFFS ENIVNELTDVFADTTICAAQTRIKMKDVTNFMFIAQDVEFFTINNFIQKARRATKTIGLG GNGQFFRLSMITEHLGYQPWGNALLDDYELTIKLMLKELSIAYIDEAFMAQEALKDVKRF IRQRSRWVQGNLDCLAYLPRVIKSKSLTLRQKCGIYYFLAQPFINLVAGILVFVLTGLQL QHLYRLGFSLSLGISFALAVSISLVFGIFFTINYYRELKSFQLAVPAKLGLISLPFTISY MYLILFVSVVMAYYRFIKGNTTWIKTERN >gi|237663595|gb|GG668923.1| GENE 435 389995 - 391260 1136 421 aa, chain + ## HITS:1 COG:RSc1803 KEGG:ns NR:ns ## COG: RSc1803 COG0038 # Protein_GI_number: 17546522 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Ralstonia solanacearum # 14 400 4 390 431 280 44.0 5e-75 MKKETKQLLSIGGYMTKWLLITAIIGLFMGALSAFFLKSLTYVTDVRLANPWLLFILPIS GVVFTYFYTRFGKNAGRGNNLVIEQGNGGEEDIPLRLIPLTLFGTITTHLFGGSVGREGT AVQMGGAIANAVGKIFKLSALERQVIIISGISAGFSSVFGTPLAGTVFGLEVLAIGKVRA EALFPSFFAGLFANFVTESFGVTHTHYPMGKIPTWSVELFVKLFLASICFGLAGWVFSRS IVFLKKTYANWFANVYLRAFLGASIVVLFVLILNNQRYLGLSLPLLEDAFAGNAQPFDFV GKLFFTVLSLGAGFQGGEVTPLFEIGATLGSSLAPLLHLSIPFLAGLGFIGVFSGATNTP IACFIMGIELFGSEAAVYFFMVCLISFMCSGNSGIYASQQSLYRKGTAEYPLFNALKNRR K >gi|237663595|gb|GG668923.1| GENE 436 391310 - 391588 423 92 aa, chain + ## HITS:1 COG:SP1404 KEGG:ns NR:ns ## COG: SP1404 COG4476 # Protein_GI_number: 15901258 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 2 90 3 91 92 92 55.0 2e-19 MKDYQYPLDLDWTTEEMVIVTNMWTAVEQANETGLPVDKFLTTYQQFKTVVKSIGEEKRL GREFENASGYSLYRTLQQAKKQGSGKLKLGDD >gi|237663595|gb|GG668923.1| GENE 437 391589 - 392371 974 260 aa, chain + ## HITS:1 COG:BS_yktC KEGG:ns NR:ns ## COG: BS_yktC COG0483 # Protein_GI_number: 16078531 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Bacillus subtilis # 1 257 1 262 265 179 37.0 6e-45 MTETQKFVQTIQSWLFEAADVIRMNLESELTVQQKNGRTDLVTNMDEQTQEFLMNKIQTN FPEDQILGEEKGYNTLKSFAGRVWIIDPIDGTMNFVMERENFCIMLAVYEEGIGKLGFIY DVMREELYWGGKGLGVYRNNQLLKAPTMKALADGLWGMNAYMHGKNIHHATEIGQASMGV RISGCAGLEIIAMLKGNHHGYLSNLSPWDYAAGLVLLEEFGFKYSGITGKPLTFAGREYF IAATPETYDEVFTRYLNESE >gi|237663595|gb|GG668923.1| GENE 438 392592 - 394427 2099 611 aa, chain + ## HITS:1 COG:SP0681 KEGG:ns NR:ns ## COG: SP0681 COG1217 # Protein_GI_number: 15900582 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Streptococcus pneumoniae TIGR4 # 2 611 3 613 613 1021 86.0 0 MKYRDDIRNVAIIAHVDHGKTTLVDELLKQSDTLDGHTQLQERAMDSNALESERGITILA KNTAVDYNGTRINILDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKALE QKVTPIVVVNKIDKPSARPEHVVDEVLELFIELGADDDQLDFPVVYASALNGTSSESDDP ADQEPTMAPIFDKIIEHVPAPVDNSDEPLQFQVSLLDYNDYVGRIGIGRVFRGTMKVGDQ VALMKLDGSVKNFRVTKILGFFGLQRVEIDEAKAGDLIAVSGMEDIFVGETVVDVHNQEA LPILHIDEPTLQMTFLVNNSPFAGREGKYITARKIEERLMAELQTDVSLRVDPIGPDSWT VSGRGELHLSILIENMRREGYELQVSRPEVIEREIDGVKCEPFERVQIDTPEEYMGSVIE SLSLRKGEMQDMINAGNGQMRLIFLAPARGLIGYSTEFLSMTRGYGIMNHTFDQYLPMIQ GTIGGRHQGALVSIDTGKATTYSIMSIEERGTVFVEPTTEVYEGMIVGENNRDNDLTVNI TKAKQMTNVRSATKDQTSVIKKPKKLTLEESLEFLNEDEYCEVTPESIRLRKQILNKNER EKANKKKKKAE >gi|237663595|gb|GG668923.1| GENE 439 394502 - 395317 765 271 aa, chain + ## HITS:1 COG:lin1330 KEGG:ns NR:ns ## COG: lin1330 COG0584 # Protein_GI_number: 16800398 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Listeria innocua # 32 170 2 135 235 79 30.0 5e-15 MNKIAKSLIVGVFLLTGCANSSVERLLPKNQTQIIAHRGDHNKAPENTVEAINEAANQNY NGVEIDVRSNKDGQLYLMHDNTLDRTTNGQGKSEKFTMKQLKKVSIKTASYPKYENTSIK IPTFEEAIEAAANNGLMVNVDGSKGNWLDEHFVKNVMDILKKYEIYDRSFFVISDEPSRN FVIQKYPDATVSWLCDKKEDIPKEIKKIKSYKNALLSVANDIADEAVIEKLNVSGIRYQV YGVQTSERYQELKKMKVPLIETDKVVPDKAE >gi|237663595|gb|GG668923.1| GENE 440 395433 - 395495 80 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWITTRYPQQANVVIFESFW >gi|237663595|gb|GG668923.1| GENE 441 395635 - 397404 1913 589 aa, chain + ## HITS:1 COG:lin2900 KEGG:ns NR:ns ## COG: lin2900 COG0514 # Protein_GI_number: 16801959 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Listeria innocua # 5 583 6 586 590 712 58.0 0 MSALQELLKDTFGYDDFRPGQETIIRHVLRQENVLGIMPTGGGKSICYQLPALLLDNLTL VISPLISLMKDQVDALNLMGIPATYINSTISYQEMNHRIQLAVNKEVKLLYVAPERLESY DFQQMLTHVPIDLLAVDEAHCISQWGHDFRPSYLRLAEIIDQFQQQPTVIALTATATPQV AEDIVKQLRIPSENEIKTGFARENLSFQVVKDQNRDVFLLEYLKMNTGQSGIIYASTRKE VERIYHLLENKKIATGMYHGGMSEQLRSENQEAFLYDQVQVMVATNAFGMGINKSNVRFV IHAQVPGNIESYYQEAGRAGRDGLPSDAVLMFAPQDLQIQQYFIEQSEMTIDYKQKEYLK LREMSQYANAQMCLQKYILRYFGEEGTDCGRCSNCLDNRELVDITVDAQKVLSCVKRMGE RFGKGLVGKVLTGSKDQKIDQWHFDRLPTYGLMKGRTQKEVTQLIDYLTAERYLIPSDGQ FPLLSVSTEGVQVLLGERKVFRKEDQKVRKVAVDDALFERLRELRMDMAQEAGVPPYVVF SDSTLKEMCEKLPQTTIQLLQIKGVGQNKLDKYGTAFLEVIKEYQETKK >gi|237663595|gb|GG668923.1| GENE 442 397631 - 397936 435 101 aa, chain + ## HITS:1 COG:lin1058 KEGG:ns NR:ns ## COG: lin1058 COG4838 # Protein_GI_number: 16800127 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 10 84 12 86 93 77 53.0 6e-15 MDEGISKKFAIQLLEDDAERIKMLIRNQKNSLCISQCKAFEEVVDTQMYGFSRQVTYATR LGILTNDEGHRLLSDLERELNQLYTDVYEETQEKNEIGKEG >gi|237663595|gb|GG668923.1| GENE 443 397940 - 399148 1288 402 aa, chain + ## HITS:1 COG:SP1067 KEGG:ns NR:ns ## COG: SP1067 COG0772 # Protein_GI_number: 15900936 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 4 393 2 398 409 342 48.0 5e-94 MPNKVKKRHLLDYSIFIPYLILSIVGLIMVYSSTSALQVMKGFSPTSFVINQVAFWVVGL VAMFFIYKMKTSVFQNRSFIMFAIAVITVMVLAVRIPGIGKEINGARGWIEIGGFSMQPA EYLKIMVVWYLSYILARRQKTINGGMDQFKQAAGRPLMLVFVLIALVAIQPDFGNAAILT LITIVMVLASGINYMYTYLVGGLGILGSITAIQLLIMSKGKIFPARYQYIYNRFAVFKNP FLDERNLGHQLANSYYAISNGGWFGKGLGNSVQKKGFLPEAHTDFIFAITLEELGIIGGL AILGLLMFMIARIILVGVRSKKPFNSLMCIGIGTMLLIQVFINVGGITGIIPLTGITFPF LSQGGNSLLIISIAVAFVLNISADETRQKLENEYYLSLEQNR >gi|237663595|gb|GG668923.1| GENE 444 399181 - 402609 3900 1142 aa, chain + ## HITS:1 COG:L63652 KEGG:ns NR:ns ## COG: L63652 COG1038 # Protein_GI_number: 15672651 # Func_class: C Energy production and conversion # Function: Pyruvate carboxylase # Organism: Lactococcus lactis # 1 1139 1 1136 1137 1655 70.0 0 MKKVLVANRGEIAIRIFRACTELDIRTVAIYAAEDEYSVHRFKADEAYLVGKGKKPIEAY LDIENIIQIAKKSGADAIHPGYGFLSENLRFAERCEEEGIIFVGPKTHHLDIFGDKIKAK EAAVAAGIASIPGSDGPVATVEEVVAFGETHGFPIMIKAALGGGGRGMRVAHDAKEAREG YERAKSEAKAAFGSDEVYVEKYISNPKHIEVQILGDHHGNVLHLFERDCSVQRRHQKVVE VAPCVSMNEEQRAAICSAAVQLMAHVGYVNAGTVEFLVEGDQFYFIEVNPRVQVEHTITE MITDIDIVISQLQIAQGLDLHKDMHLPKQNELTLKGAAIQCRITTEDPLNQFMPDTGKID TYRSPGGFGVRLDVGNAYSGYAVTPYFDSLLVKVCTHGFSFEQAISKMQRCLKEFRIRGV KTNIPFLQNVVSYPAFQSGEAKTTFIDNTPELFEFPRMRDRGNKTMKYIGEVTVNGFPGI ERTEKKYFEAPRVPTDIEVPEKVITAKNILDAQGATAVIDWVKNQESVLMTDTTFRDAHQ SLLATRVRTQDFKAIAGLTDAALPELFSSEMWGGATFDVAYRFLTEDPWQRLRKIRQLMP NTLLQMLFRGSNAVGYQNYPDNVIEEFIKESARQGVDVFRIFDSLNWIPQMEKSIQVVRD TGKIAEAAICYTGDINDPARAKYNVQYYLDMAKELENLGAQIIAIKDMAGLLKPQAAYRL ISELKAATDLPIHLHTHDTSGNGIITYSAATKAGVDIVDVAMSAMSGATSQPSMNSLYYA LVNGERTPTINIDNAQKINHYWEDVRMYYQPFENGLNAPQTEVYMHEMPGGQYSNLQQQA KAVGLGHRWDEIKKMYHTVNLMFGDIVKVTPSSKVVGDMALFMVQNNLTEQDVYAHGEEL SFPESVVTFFQGDLGQPVGGFPKELQRIILKGRPAFTERPGDLAAPVDFARVQEELAEKI GYQPKLEEVLSYLMYPQVFLEYRQKYETFGDITLLDTPTFFNGIRQGETLEVQIERGKTL IIRLDEIGEPDIDGNRVLFFNLNGQRREVLVKDASIKSAVQVKQKAEPTNKEQIGATMSG SVLQVLVKRGDKVEKGQPLLITEAMKMETTIEARFAGTVDHIYVEEGEAISSGDLLLEVK EK >gi|237663595|gb|GG668923.1| GENE 445 402626 - 403750 931 374 aa, chain + ## HITS:1 COG:lin2162 KEGG:ns NR:ns ## COG: lin2162 COG2340 # Protein_GI_number: 16801228 # Func_class: S Function unknown # Function: Uncharacterized protein with SCP/PR1 domains # Organism: Listeria innocua # 1 236 1 246 351 90 26.0 6e-18 MKRFWAFTAVFLTVLLIGYLEPVFFPAEKPTETAQSGRLSSAHTAVPHEELPASGYAAYI GKDVETFIRQFGNPKEKIKTGRTYELWTFGLTMNDYLEVNVRENKVIAIKAFNNDKMIEP FKIDMKLADLSDLMTIYSNFAFNFHHEAYDVELMEEDMNYRPLVAFDNGSFAVLFFNQRT GGLMAVNYVNKETLLTEMPYQLNEGSPLPVDITQSMTFDPVQSNQAIYVMNLVKQQENQA AFSVSTQSQKDAQTLYQTLANHTPTVLSANRQAELLQTREEHTAIHPFQLTKDEFSLLVK TSKLSLREPAGIFQEPVYDSTFTILSWFSDPQYDSYFAESETTELGVAFSNEGVLVLLEK RPENRQITESSEKL >gi|237663595|gb|GG668923.1| GENE 446 403747 - 404181 222 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764796|ref|ZP_02171849.1| ribosomal protein S17 [Bacillus selenitireducens MLS10] # 7 141 12 143 146 90 35 1e-16 MIVTEHLFAIEDQTECLISALLESDAVQNYKETKKAMYASAEVAQLQKAFLEAKSAFERV EAYGIHAPDFREKQRALRKAKRALDLNEIVANYRFAETNVQTLLDTIGLKIAQLISEDIK VDAGNPFFERGKKHSGCGGSCHAS >gi|237663595|gb|GG668923.1| GENE 447 404171 - 404521 420 116 aa, chain + ## HITS:1 COG:BH2594 KEGG:ns NR:ns ## COG: BH2594 COG4471 # Protein_GI_number: 15615157 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 14 91 6 83 92 70 46.0 1e-12 MQAKEEKEFTLQERRCLIVWVYTLKPLKQLRRYGLIHYVSRKMKYVVIYMNEENIESNME KINQLHFVRSVDKSYRPDVEMNFAEKIGTKAAYQEQEDDGYVVEELSTEIRLAENV >gi|237663595|gb|GG668923.1| GENE 448 404620 - 405174 720 184 aa, chain + ## HITS:1 COG:L22498 KEGG:ns NR:ns ## COG: L22498 COG0742 # Protein_GI_number: 15674145 # Func_class: L Replication, recombination and repair # Function: N6-adenine-specific methylase # Organism: Lactococcus lactis # 1 180 10 186 188 214 61.0 5e-56 MRVISGEYGGRRLKALDGDNTRPTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAV SRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD PPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKTVKLPETIGTLEKTRETVYGITQVTIY RQEA >gi|237663595|gb|GG668923.1| GENE 449 405176 - 405667 334 163 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 2 158 3 158 164 133 43 1e-29 MRKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINTSKQTLFTPEEKKYLIEEATK EMPNVRVIMQETQLTVESAKSLGANFLIRGIRNVKDYEYEKDIAKMNQHLAPEIETVFLL AEEPYAHVSSSLLKEVLRFGGDVSDYLPPNIYHALKQKKNDWS >gi|237663595|gb|GG668923.1| GENE 450 405672 - 406724 471 350 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764799|ref|ZP_02171852.1| ribosomal protein S12 [Bacillus selenitireducens MLS10] # 1 346 1 343 350 186 33 2e-45 MNKKTEKFSFKSLIPMVLALLLIGLFIVPIPYYIEGPGTTENLKEFVTVDGKKDTQSGAF YLTTVGIRSATIFSAIKANFSDFQEVMSKKELMGDSSNSEYNRIQQYYMDSSKNAAIEQA LKLAKVPYEMKFKGVYVLAMEDNSSFKGKIEVGDTVTGVDGKSFKSSEELMNYIKAQKVN QKVTVQFIQDGKAKEATGKLIELPTDKKAGIGIGLTDHTEIDSSIPVSIEAGDIGGPSAG LMFTLQTYEQLSHKDLRKGHEIAGTGTMNSQGIVGRIGGIDKKVVTASENGAEIFFAPDD EITSEMKKVEPKIKSNYQEAQEAAKKIGTKMKIVPVKTVQDALNYLEKLK >gi|237663595|gb|GG668923.1| GENE 451 406820 - 407464 687 214 aa, chain + ## HITS:1 COG:lin1519 KEGG:ns NR:ns ## COG: lin1519 COG1555 # Protein_GI_number: 16800587 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Listeria innocua # 67 212 57 199 200 132 49.0 3e-31 MDWLKQLPKKWLLLGSGASMVILITLLVGIYLMVNKKAQVDTTMWEETSLTTTAEVATDA TKERTETMIYVDIKGAVKVPGIYQLKNQQRIWDALALAGGVSEEADTAQVNYAQKVKDQM IIYVPKKGESVAQSLETLQESAPAQQNQEEKINVNTATEAELQTISGIGAKKAQEIIRFR DEQGPFKTVEELKNVPGIGEKTVERLKDMLTVTG >gi|237663595|gb|GG668923.1| GENE 452 407587 - 408090 397 167 aa, chain + ## HITS:1 COG:BH1334 KEGG:ns NR:ns ## COG: BH1334 COG2131 # Protein_GI_number: 15613897 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Bacillus halodurans # 1 141 1 141 188 235 75.0 2e-62 MERIPWDQYFMGQSVLLSLRSTCTRLTVGATIVRDKRIIAGGYNGSVSGGTHCIDEGCYV VDNHCVRTIHAEMNAILQCAKFGVPTEGAEIYVTHFPCLQCTKMILQAGIKKIYYLKDYR NDAYALNLIEQVGATVEKVTLVPKYFAELQWGEEFATLEDNPSSAEE >gi|237663595|gb|GG668923.1| GENE 453 408260 - 409537 741 425 aa, chain + ## HITS:1 COG:SP0955_1 KEGG:ns NR:ns ## COG: SP0955_1 COG0658 # Protein_GI_number: 15900832 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Streptococcus pneumoniae TIGR4 # 21 396 87 443 466 185 37.0 1e-46 MIFQWLKPVSLLPKEVRLSGQLTILPDEIQVDGDQVKFPANWIVKGKSQKVMAFYQLKSV KEKQQWQQLTTTIQATAVGILDSPQGQTNKNGFNYQLFLKNQGIEAILFIEEIGQPRSFF SWRFKEIISGWRKWAMVHIQKNFADTSAMYMNALLLGFRNEEFAEISDKFSALGILHLFS LSGMHVSFFLRLFRLLMLRIARRTQESYFLWQCGFSLIYAGLTGFSVSVMRALLQTNLNT FNRRFNWQVPALDCWSLTLLVHLIVQPTLFFSVGGQFSYLLSFVLLFLEQTLVGYSSPFI KNCVGSFLLAVASLPILVQSFYEWPLLGSFLTFLLLPIFERFLLPLLTLSFFLVIIMPAR YLAALLEPLFLTMNGLFEWVLVHLNPKLTIGYLNAWIQISLLLLIGLSMIYLADKSKKIF SQSDY >gi|237663595|gb|GG668923.1| GENE 454 409543 - 410388 382 281 aa, chain + ## HITS:1 COG:L0317_2 KEGG:ns NR:ns ## COG: L0317_2 COG2333 # Protein_GI_number: 15673754 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Lactococcus lactis # 13 261 23 267 282 212 44.0 6e-55 MINSKYLSPIGIVAMIDVGQGDSLFIQAPFHRKNTLIDTGGRLSFDKEAWRKRKNSRSGA EYSVIPFLKSQGVKRLDEVIITHAHEDHFGDLLAIAQKVPISVLYFPKGAAEANFSFHQV LKQLQKSGTDCRPILAPKRINGPVSFQILSPNKSSIGGNNDSIVFSTQLGGRHFLFTGDL EAEGEEQVLARYPQLKIDILKVGHHGSKTSSTKRFIKQLNPREALISAGLNNRFKHPHQE TLATLEEQKINYYRTDLQGMIYYQWLPWQGLSKAKFVKEQD >gi|237663595|gb|GG668923.1| GENE 455 410446 - 411474 1194 342 aa, chain + ## HITS:1 COG:BS_yqeN KEGG:ns NR:ns ## COG: BS_yqeN COG1466 # Protein_GI_number: 16079610 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Bacillus subtilis # 8 326 7 325 347 243 43.0 4e-64 MELQKALKEVREQKIAPVYLLIGTELYLTELFKTTLMKELLTEEDDQFNFFSFDMEETPL SAAIAEAETIPFFGDYRLVFVENPYFLTAERKTNGVEHDVNLLLNYLESPSPTTVLVFMA SYEKLDERKKITKALKKNATVVDVNPMDEKAIRQYISQTIESEGYTIRSDAFDLLLQLTD LNLSKIMGELQKLYLYALETKTITRGAVQELVPKSLEHNVFDLTNEVLSGNSEKAVQLYE DLLLQGEETIKLNAILLNQIRLFLQTKILAKMGYQQANIADTLKVHPYRVKLALQQVRRF ELSRLERLYDELVENDYRMKTGQMDKELLFQLFILKLTAQAK >gi|237663595|gb|GG668923.1| GENE 456 411526 - 412467 1221 313 aa, chain - ## HITS:1 COG:L157055 KEGG:ns NR:ns ## COG: L157055 COG1893 # Protein_GI_number: 15673305 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Lactococcus lactis # 1 313 1 312 312 407 62.0 1e-113 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIREHGLIADFNGEEVVAKLPIF SPEEIDHQNEQVDLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPK ENILVGITMWTAGLEGPGRVKLLGDGEIELENIDPSGKEFALEVVDVFQQAGLNPSYSSN VRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAVAEKEAIHLDQA EVYTHIAQTYDPNGIGLHYPSMYQDLIKNHRLTEIDYINGAVWRKGQKYNVATPFCAMLT QLVHGKEELLGAK >gi|237663595|gb|GG668923.1| GENE 457 412657 - 413193 418 178 aa, chain + ## HITS:1 COG:lin2060 KEGG:ns NR:ns ## COG: lin2060 COG1607 # Protein_GI_number: 16801126 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Listeria innocua # 3 173 5 172 172 167 50.0 7e-42 MTKEKFCRESRVIQTHRVFPFDLNPFGALFGGKLMSLIDDAASISVSRHCRRGAVTASLD NLNFLKPLKENHSVCVETFVSGVHHKSMEVFVKVVGEDLTTGERYLAATCFTTFVAIPSH MNPESDFQLAAVVPETAEEKLICSNYETRRQQRLALREETKLFSQHLTTDLPWIDSPL >gi|237663595|gb|GG668923.1| GENE 458 413280 - 413594 509 104 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227519840|ref|ZP_03949889.1| ribosomal protein S20 [Enterococcus faecalis TX0104] # 1 104 1 104 104 200 100 7e-50 MITVELHWLTSVKPKSSEVKQMPNIESAIKRVRTSANANAKNSSQTNAMRTAIKKFEEAV AAGADNVDALYNEAVKAVDMAATKGLIHKNKANRDKIRLSKLAK >gi|237663595|gb|GG668923.1| GENE 459 413763 - 414776 940 337 aa, chain + ## HITS:1 COG:SA0619 KEGG:ns NR:ns ## COG: SA0619 COG0306 # Protein_GI_number: 15926341 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Staphylococcus aureus N315 # 17 326 20 324 335 196 39.0 6e-50 MSIALLVTITLVMGVIFVNGWTDAPNAIATAVSTRVLKPNVAIWMAVVMNFLGALVMTFF NAQVAETISNIVSFDANGNASQVALAASLFSIVVWAVAAWYFGIPTSESHALIAGLTGSA MALGGLGAVNGSEWIKVLVGLVVSTVMGFGGGYLIAKLVVKAFSAVPRRKANKFFTVGQA FGAGANAFLHGAQDGQKFMGVFMLVLFYNNLVEKTGGGFVIPLWVMVLCSITMGIGTSVG GMRIIKSVGMDMVKLERYQGFTADLSTAICLFLASAFGIPVSTTHTKTTAIMGVGASKRI SSVDWRIVKEMLIAWILTFPGCGLIAYVMSKLFIAIF >gi|237663595|gb|GG668923.1| GENE 460 414789 - 415412 853 207 aa, chain + ## HITS:1 COG:CAC3094 KEGG:ns NR:ns ## COG: CAC3094 COG1392 # Protein_GI_number: 15896345 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate transport regulator (distant homolog of PhoU) # Organism: Clostridium acetobutylicum # 5 206 10 209 210 99 35.0 4e-21 MARKKQFDYFGELNQLATNAYEAAKVLQEVVDNYSLENLVKKSEVIHQLEKENDEIVRKI LNELYISFITPIDREDIVDITDHLDNIIDSINSLSYLLDHLVVEEMIAPALELTAYIVKA TEGVKSATKEFAKFKNSKTLVSLIDEVNTIESQGDKLYSSAMKDLMTNEKDLLKVIKWKD VYDQLERTINDCESAVNIIVGIVIKNT >gi|237663595|gb|GG668923.1| GENE 461 415431 - 416216 740 261 aa, chain + ## HITS:1 COG:lin0339 KEGG:ns NR:ns ## COG: lin0339 COG3394 # Protein_GI_number: 16799416 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 261 1 261 261 404 71.0 1e-113 MVKVIVDADDFGMSEAINHGIIKSYVDGLTTSTLLMPNLPTAEHAVALAKNYPGLFVGQH TNFLLGKPCADPCMIPSLVDEQGNFHRSSYYRQQKQVTFVYEEVRLETIAQLTRFKELTG HYPEHFDCHSIGDEVVDQVFLELAEEYGLHTTLKYSGEKEYPPQQGYFQVTHLLESGALS YIHEGVSVENFLEDDFGLLRMPESAIAEMHFDVGYLDQFVLDNSSYTTLRCKELATICDP RVRQWFEEQGIERITFGDLKK >gi|237663595|gb|GG668923.1| GENE 462 416255 - 417085 848 276 aa, chain - ## HITS:1 COG:L58643 KEGG:ns NR:ns ## COG: L58643 COG1968 # Protein_GI_number: 15674174 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Lactococcus lactis # 8 275 5 279 284 298 60.0 7e-81 MLFANLWKAIILGIIEGITEWLPISSTGHLILVDEFIKLDLSKDFMEMFNVVIQLGAIMA VVILYFHKLNPFSPKKNGEEKKDTWILWSKVLVACLPAAVIGLKFDDYLDAHFYNFLTVS IMLIVYGIAFIIIEKRNKNVTPKCTNLKDFTYKAALIVGAFQVLALIPGTSRSGATILGA ILIGASRFVATEFSFFLGIPVMFGASFLKIFKFLAKGNTFGSEEIIILLTGSIVAFVVSI IAIKFLLNYLKKNDFTVFGWYRVILGAILIGYWLFS >gi|237663595|gb|GG668923.1| GENE 463 417267 - 417761 671 164 aa, chain + ## HITS:1 COG:SP0758_3 KEGG:ns NR:ns ## COG: SP0758_3 COG2190 # Protein_GI_number: 15900652 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Streptococcus pneumoniae TIGR4 # 17 159 5 147 151 136 51.0 1e-32 MFGFLKKKNEVVENNTMYAVANGTVIPISEVNDPVFSQKMMGDGYAVVPENGEIYAPIEG EVLSVFQTKHAIGLKMTNGLEILLHMGIDTVELNGAPFTIKVKEGDQVTADTVVAIANLE AIKAAGKGTEMVVIITNMDKVAQFSLEKTGVVTAGTPVGSATAN >gi|237663595|gb|GG668923.1| GENE 464 418202 - 419311 1060 369 aa, chain + ## HITS:1 COG:L143292 KEGG:ns NR:ns ## COG: L143292 COG3589 # Protein_GI_number: 15673111 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 357 1 349 353 327 47.0 2e-89 MYGISVFLGEEITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEK MKIMVDISGEALKRAGFSFDELEPLIELGVTGLRMDYGITIEQMAHASHKIDIGLNASTI TLEEVAELKAHQADFSRLEAWHNYYPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGDGQ TRGPIFAGLPTLEKHRGQNPFAAAVGLMADPYVDAVYIGDPKISERTMAQFGYYHQTNQF LLEVAPSKSRYLKRILGTHTNRLDAARDVLRSELSRTSEMFRKDEIATIESEQTEARPVG TVTIDNEKYGRYMGEIQVTLVDLPKDEKVNTITQIIEKDQTILPLIKAGNQFTLVTEGTI ENEFRKLNN >gi|237663595|gb|GG668923.1| GENE 465 419286 - 420176 1189 296 aa, chain + ## HITS:1 COG:L144334 KEGG:ns NR:ns ## COG: L144334 COG2103 # Protein_GI_number: 15673112 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Lactococcus lactis # 1 296 2 297 297 408 74.0 1e-114 MNLENLTTERRNENTMGLDEMSVKEALQKMNQEDQKVAIAVGQELAAIEPVVEAIIKSFN QGGRLIYMGAGTSGRLGVLDAAECVPTFGVEPEMVQGLIAGGQKAMTVAVEGAEDSKELG RQDLVDLKLSANDIVVGIAASGRTPYVIGGLEYATTVGAATATVACNKNAEISKYAQMPI EVDAGPEFLTGSTRLKSGTAQKLILNMLSTISMIGIGKVYNNLMVDVKPTNEKLVERSKR IIMEATGCSYEVAELKFVEAEENVKLAIVMILTDSTKEEATQKLIDGNQFIKNTLN >gi|237663595|gb|GG668923.1| GENE 466 420199 - 421653 1937 484 aa, chain + ## HITS:1 COG:L145238_2 KEGG:ns NR:ns ## COG: L145238_2 COG1263 # Protein_GI_number: 15673113 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Lactococcus lactis # 117 463 1 348 348 430 72.0 1e-120 MAEERIKRIADGIYKEVGGQENVDKVIHCMTRVRMDIRDYDKVDIEGLKKIDGVMGVVED DTLQVVVGPGTVNKVAQEMVDQAGVKLGEPFNHGTATDDSAGKSGKDLVEEKAAQMKAQQ KAKQNNTSPFKKVLKAISSIFVPMIPAFVGAGIIGGIAAVMSNLVVAGDISASWQQYIDV LNIIKNGIFAYLALYTGINSASVFGATPALGGVIGAVTMLTGMNPDAPISNIFTGGTLSA GQGGIIGVIFAVWLLSLLEKQLHKIVPESIDIIVTPTISLLVIGLATIFLIMPVAGAISN GLVGIINVVLEKGGMVAGFTLGLTFLPMVMFGLHQILTPIHIEMINQTGMTLLLPILAMA GAGQVGAALALWIRCKSDKKLVEMIKGALPVGILGIGEPLIYGVTLPLGRPFITACIGGG IGGAVIGAFGNVGAIAIGPSGVALIPLIANNQWLAYVLGLLAAYAGGFVATLFFGIPKDM QTTK >gi|237663595|gb|GG668923.1| GENE 467 421740 - 422588 1006 282 aa, chain + ## HITS:1 COG:L147291 KEGG:ns NR:ns ## COG: L147291 COG1737 # Protein_GI_number: 15673115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 4 282 2 282 283 200 41.0 3e-51 MQQNIVLSIQDRLQQLPKSERKIAEYILKNTETVISMNAQELAKQAGSSPAAIIRFCHSM DVNGFTELKLLLSANLGQMKQQMYTEVTKGESTADIKQKLQARFVHVVERSGQTLEDVAV NEAVDLLEKTEVIFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSV FIVISNSGTNKEASTLADLAKQQGIPIISITQDEKSVIGEKSDIVLQTSSGEDVPLRSAA TVSLVAQLYVVDVLFFAYAAKNYKETLEKIQISRKNVERLKE >gi|237663595|gb|GG668923.1| GENE 468 422644 - 423348 991 234 aa, chain - ## HITS:1 COG:SPy1766 KEGG:ns NR:ns ## COG: SPy1766 COG0406 # Protein_GI_number: 15675611 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Streptococcus pyogenes M1 GAS # 5 233 4 231 235 254 57.0 1e-67 MTEATTLYIIRHGKTMFNTIGRTQGWSDTPLTKQGEEGIYHLGLGLRDIDFKEAYSSDSG RAMQTAQIILQEHQNHQKIPYLTDKRIREWCFGSLDGGYDGELWGVVPRILAFKSYEDMM TTKITYRELANAIIEADTADWSEPYEVIRDRVWSGFEDIAHHREKNGGGKVMVVSHGLTI SFLLSLIDASLPMQMALENGSVTTLTYEKGTFTIQGINDISYIEKGKKIAEKRR >gi|237663595|gb|GG668923.1| GENE 469 423389 - 424015 717 208 aa, chain - ## HITS:1 COG:lin2270 KEGG:ns NR:ns ## COG: lin2270 COG0491 # Protein_GI_number: 16801334 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Listeria innocua # 1 208 1 205 205 283 66.0 2e-76 MIQIEQIRTGVIQENCYLVYNEEALLIIDPGAEGAKLIQEITRLGKKPAAILLTHTHYDH IGAVEELRHHYQIPVYVSPLEQAWLSNPILNLSGLGRHDDIANIIVQPAEHEFKLTDYEI GGMKFSVVPTPGHSIGSVSFVFDDFVVVGDALFKGSIGRTDLHTGDMQQLLHSITTYLFT LPEEFPVYPGHGDATTIQHEKATNPFFN >gi|237663595|gb|GG668923.1| GENE 470 424235 - 425620 1616 461 aa, chain + ## HITS:1 COG:SPCC1672.03c KEGG:ns NR:ns ## COG: SPCC1672.03c COG0402 # Protein_GI_number: 19075374 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Schizosaccharomyces pombe # 54 449 58 444 527 267 36.0 3e-71 MFHFVIKGTGFSSKNLQEIKVYEETLFCIDEAGVIQEIIEPDAEAYETVLAEQKEAQRFQ ELPQDSYLLPGFVDLHVHAPQWAQSGTALDIPLYEWLNTYTFPLESKFADLTFAQQVYDE LVTQLLANGTTTALYFATIHYEASRRLAEICAEKGQRGLIGKVVMDDLNENPEYYRDQTT QQALEETERFIQEIQTLAQQTKQGVYPVVTPRFIPSCTEEALKGLGELAAKYQVHVQSHC SESDWEHQFVQERFGKNDAQALNDFGLLTEKAVMAHAGFLEEADMNLFHETGTAVAHCPI SNAYFGNAVTPIAKLVHQHQVEVGLGSDLSGGFSPSLFDNLKQAVISSRMLEDGVDATKK PEVRGVKTARITVNEAFYLATAGGGQALSLPIGKLEKGYAWDVQIINTSLSQARIPKNPG ESLLDIFQKILYLARPENIREVWVQGEKVHDKNLMSATKGA >gi|237663595|gb|GG668923.1| GENE 471 425624 - 426955 358 443 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 27 438 19 419 447 142 28 2e-32 MSEKKQNNLHLTVGPEDSVSFGQATMLGIQHVLAMDVYVVPVIIASIIGISTAQTSSLIQ ATFIAAGLATIIQSHFCMRLPVAQGPSFIPIGAIAGIYFANNQQGNGWGAVLGASLVGAI VVIILGFTGVFNRLITKFVPPIVGGTIIFVVGLSLMPVALSDNIYHAKGELGQNILLAFI AAGTLIFFALLGSALKKGRIFRVSSVILALLFGSIAAQLLGVLDLSAVSEAAWFSLPQLP LVNFSFQFDWSAIATMLVIYLVLMAETTGTWFAVSHVVAEPLTEEKINRGVIGEGLGCLV SSFIGGTPVTSYSTNAGIISITGVASRKVFVAAGAWFVLFGLSGKLSTLISAIPAPVIGG VFVVVCGIISVSGMKVMSDVTIHEKEMYVIAVPIIMTLALTLLPKEFLETLPQFLQYLFS SPVATASIVAILLQAILPNVQEG >gi|237663595|gb|GG668923.1| GENE 472 427097 - 428074 1271 325 aa, chain + ## HITS:1 COG:jhp0790 KEGG:ns NR:ns ## COG: jhp0790 COG0516 # Protein_GI_number: 15611857 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Helicobacter pylori J99 # 1 325 1 325 325 580 86.0 1e-165 MKVFDYEDVQLIPNKCIVNSRSECDTTVTLGKHSFKMPVVPANMQTIIDETIAETLAENG YFYIMHRFDEEARVPFIKKMQQKGLITSISVGVKEGEYAFVETLAREGLVPDYVTIDIAH GHSNAVINMIQHLKKFLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKT GFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSVRFGATMVMIGSLFAGHEESPG ETKVEDGVVYKEYFGSASEFQKGEKKNVEGKKIWLRHKGKLADTLVEMQQDLQSSISYAG GRDLEAIRKVDYVIVKNSIFNGDTI >gi|237663595|gb|GG668923.1| GENE 473 428236 - 428568 214 110 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|18309686|ref|NP_561620.1| 30S ribosomal protein [Clostridium perfringens str. 13] # 2 105 3 107 110 87 42 1e-15 MIGSDAIRGYNDTFILSILQSGASYGYAISKRIREISKEQYSIKETTLYSAFTRLEKNGY IESFPGEVTHGKKRTYYQITRAGERYLEEKLLEWEVTKDVVEAFVKEMGK >gi|237663595|gb|GG668923.1| GENE 474 428565 - 429593 1029 342 aa, chain + ## HITS:1 COG:no KEGG:EF2427 NR:ns ## KEGG: EF2427 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 342 1 342 342 649 98.0 0 MKIIEEFIDSLFSGVVETSETKQLKADLLANAEDRYEDLLSQGKSENEAIGTIISEFGTI DELMEELNLENKQVDETNDLMNGLPEISVEEGLDYLAVQRKGAIQIGLGVVAIMVGVGLL VGMRGVLSNGLGLVCLFIGVAIGVPLFIVAGNRFVAMDKQLGQRLIPTKLKKEVAQREQS FQRSFIFCMAAGVVFCILGLIPVVVFSSGLHLMMRRSMHQMMGGQYYNGTMGISWLFFLV SVGVFLFIFGGVIKGSFNKLLNETYFYSEHVGHPEYAPQQTKTEEGPVGNPVGAIIASVY WPLVVALYLFISFVLGDWRFSWLIFMFAGIFYNTIQAFLHKH >gi|237663595|gb|GG668923.1| GENE 475 429728 - 431179 1375 483 aa, chain + ## HITS:1 COG:lin2204 KEGG:ns NR:ns ## COG: lin2204 COG1167 # Protein_GI_number: 16801269 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Listeria innocua # 1 458 1 461 466 405 46.0 1e-113 MWQLKKEQNVPIYRSIMEMIVQKIQTGELLPGEKIPSERKLAEYLSVNRSTVVHALDELV DLGWIVRKRGSGTIVNEGKWGVMMTPRTDWHRYLEQNVFKQVHPLVAEIELRAKQNLPTD LDMYTGELPLDLIPSFDFPALNWKQFLKEEAQDELGYLPLRKEIQAITATEYQLHLPSES LLLTSGAQQALFLVLQVLLRQGDSVAVEDPSFFYALPIFQAAGVRLFGVPMTEEGIDLEA LEQTIRQHRIKMVMVNPSFQNPTGTVMPLRKREQLVKVCQTYQVPILEDDVFGQLSFIPK TEIPPLKKLDPDNVLYIGSLSKILGSTTKIGWLSAPASVTKQIAEARKMMDVSLSIFPQM LAKMAIEDPSFSEKITLLNKQVEQRATAVYQVFKSLPEWEVSPVKGGFYLWAHWRQGALK LEEWQVFLREGVLVAPSVAFSEKRGSIRLNCSRISPEEMPLFCERMVRITRQLSENRQTK IEH >gi|237663595|gb|GG668923.1| GENE 476 431300 - 433024 2279 574 aa, chain + ## HITS:1 COG:SPy1224 KEGG:ns NR:ns ## COG: SPy1224 COG1109 # Protein_GI_number: 15675188 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Streptococcus pyogenes M1 GAS # 1 570 1 568 572 714 61.0 0 MSWEQVYQQWLNEENIPENLKNELKDLNTDPEKCEDAFYAPLEFGTAGMRGILGAGINRM NIFTVRQATEGLARFMDTQDPETKRRGVAIAYDSRHMSPEFAMEAAKTLAKHDIPSFVFE SLRPTPELSFAVRYFKAFAGIMITASHNPAAYNGYKVYGEDGGQMPPADADALTKYVRSI ENPLKIDVLSDEEVAHSGLINIIGEEVDNAYLKEIKTVTINQELINEMGKELKLVYTPLH GTGKMLGEKALKQAGFEKFVLVPEQAVADPDFTTVKSPNPEEHSAFEYAIRLGEKEGADL LIATDPDADRLGAAVRMPNGDYQVLTGNQLGSIMIHYILEAHQQAGTLPQNAAVLKSIVS SELATAIAEKYNTKMFNVLTGFKFIAEKIQQYEEDHSQTFMFGFEESYGYLVKPFVRDKD AIQALVLLAEVAAFYKKQGKTLYDGLQDIFEEFGYFEEKTISVTMSGIEGSGKIKALMAK CREQAPTEFAGIQVAQTEDFKELTRTFADGQTEQLQTPPSDVLKYHLEDGSWIAIRPSGT EPKIKFYLATKATSSSEASEKIAAFEAVVNELTK >gi|237663595|gb|GG668923.1| GENE 477 433131 - 433913 1004 260 aa, chain + ## HITS:1 COG:SP0933 KEGG:ns NR:ns ## COG: SP0933 COG0345 # Protein_GI_number: 15900813 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Streptococcus pneumoniae TIGR4 # 1 257 1 256 265 169 38.0 4e-42 MKIGFIGAGSMGGAMIKGLLKAEAVKKEHLYVKGGSSGTAEALQKEWGFQLVTDYALFQE CKVIFIATGAKVVLPVLQELAPHFSNESLLVSVATGHTIQEAQMALGNKEAKVVHAIPNT PVSVNQGVIGVALAPTIEGQTKDLVMELLATLGLVKEIREAQLETFGTVAGCSPAFVDIF MEALGDAAVLEGLPRDLSYEIVAQMIKGTATLALDTKKHPGALKDEVTSPGGSTIRGVVA LEKNGFRYAVMDAVQQANHE >gi|237663595|gb|GG668923.1| GENE 478 434051 - 434338 381 95 aa, chain + ## HITS:1 COG:BS_yozA KEGG:ns NR:ns ## COG: BS_yozA COG0640 # Protein_GI_number: 16078972 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 5 94 17 106 107 85 52.0 3e-17 MKQMEEIKQVSQLYKVLSDPTRLRILLLLKEGEHNVTAISEQLEMEQSAVSHQLKLLRDS RVVKARREGKTIFYTLDDHHVIDILNQTFEHIEHR >gi|237663595|gb|GG668923.1| GENE 479 434390 - 435682 1499 430 aa, chain + ## HITS:1 COG:lin2691 KEGG:ns NR:ns ## COG: lin2691 COG0460 # Protein_GI_number: 16801752 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Listeria innocua # 1 427 1 426 428 481 58.0 1e-135 MKDTLKIGLLGLGTVGTGVLTLLKEHQEKISQVTGMNVVIEKAFVRNLETKQAQAEEYGL SLTTSIDDILEDKEIQIVVELMGTIEPAKTYIMKALEKGKHIVTANKDLLAQHGSELVAL AQKHHCDLYYEASVAGGIPILRTIANSLAADNIQQVLGIVNGTTNYMLTQMVSADKSYEE ALAEAQALGFAEADPTNDVDGIDAAYKMVILSQFAFGMNVSLPQVDIRGIRGLSLDDVAM AKQLGYEIKLIGSAEQNENSISVEVAPMLVNQKHPIASVRNEYNAVFIKSAGVGESMYYG PGAGAKPTATSVVSDLITIAKNIRLTTTGHMFNSYQHKTQLTRSENVFGQYYFSLDVPDT PGQFLQLTQLMTKAEVSFDQLVQQRSDGQRARIVAITHQISKAQMQQVVTAIQNTEAFQL LNVMKVIGDE >gi|237663595|gb|GG668923.1| GENE 480 435685 - 436740 1437 351 aa, chain + ## HITS:1 COG:lin2690 KEGG:ns NR:ns ## COG: lin2690 COG0498 # Protein_GI_number: 16801751 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Listeria innocua # 1 348 1 349 351 535 82.0 1e-152 MYEGLLKQYQAYLPVTEKTPMISLAEGNTPLIPLPNLSKELGIQLYGKYEGLNPTGSFKD RGMVMAVAKAVEEGAKAIVCASTGNTSAAAAAYATRAGIKAYVVIPEGKIALGKLAQAIM YGADIISIPGNFDEALKAVREIAKTEAVALVNSVNPYRLEGQKTAAFEVCEQLGQAPDVL AIPVGNAGNISAYWKGFKEWHEKQGTTLPRMHGFEAEGAAAIVKGQVIEQPETVATAIRI GNPASWQLAEQARDESGGFIDAVTDQEILTAYRKIAAQDGVFIEPGSAASLAGVIQHVKS GKIKAGETVVAVFTGNGLKDPDTAMETEVTISKMSDVEEMRLHLRKGVATL >gi|237663595|gb|GG668923.1| GENE 481 436737 - 437600 904 287 aa, chain + ## HITS:1 COG:lin2689 KEGG:ns NR:ns ## COG: lin2689 COG0083 # Protein_GI_number: 16801750 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Listeria innocua # 1 287 1 287 288 336 56.0 4e-92 MKIRVPATSANLGPGFDSCGIALSAYLTINVLGESEFWEIQHTLGEEIPTNEENLLIQTA LKIAPELTPKVIRMVSDIPLARGLGSSSSVIVAGIELANRLAHLNLSPKEKVRLATEMEG HPDNVAPAILGDFVVASHVENQVYHVKHHFPMCDVIAFIPEEPLFTEKSRAVLPEKLAYK EAVAASSIANVMIAAILNGDLPLAGKMMEQDKWHETYRRSLVPHLKEIRRLTQQKGAYGS FLSGAGPTVLILSPEERTNEIVQSLEKLSTKASIQIFNIDQEGVQVF >gi|237663595|gb|GG668923.1| GENE 482 437644 - 438501 814 285 aa, chain - ## HITS:1 COG:BH1373 KEGG:ns NR:ns ## COG: BH1373 COG1806 # Protein_GI_number: 15613936 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 12 266 10 264 270 227 43.0 2e-59 MTISEEKKCVTIFVISDSAGETASKLAAASMAQYPTVDFTLIRRTFVKDEDKLVQALEDA KKAEAMVLHTIINDHLVAIANQFFNEHQLFHFDILTPPVAEIERLTGVAPMREPGALHHL NENYFKRIEAMEFAVKYDDGKDPRGFLEADVLLLGVSRTSKTPLSLFLANKNLKVANLPL IPEAHLPKQLFEMDPKKIVGLTNDPNVLNGIRKERMRAYGLPENTSYSDIEKIRRELAFA NDLYQKLGCIVIDVASLSIEETASMILNALNLEDHSYYSTETSED >gi|237663595|gb|GG668923.1| GENE 483 438606 - 439040 416 144 aa, chain + ## HITS:1 COG:BS_zur KEGG:ns NR:ns ## COG: BS_zur COG0735 # Protein_GI_number: 16079565 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Bacillus subtilis # 7 141 2 135 145 135 47.0 2e-32 MAPVKTNIEQALETMKASGLKYTKKRELLMSYLIKRNRYVSAREVYEFMNETFKGVSYDT VYRNLHDFERLELLEKTELNGEQKFRFRCCQEVEHHHHFICTVCGKTEEIHMCPMNFFEE QLKGCSIEGHRFEILGRCADCCEK >gi|237663595|gb|GG668923.1| GENE 484 439143 - 439382 400 79 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227519866|ref|ZP_03949915.1| 30S ribosomal protein S21 [Enterococcus faecalis TX0104] # 1 79 1 79 79 158 98 3e-37 MWVFPTNKKNGYFLSSEGGNNMSKTVVRKNESLDDALRRFKRSVSKAGTLQESRKREFYE KPSVKRKKKSEAARKRKKF >gi|237663595|gb|GG668923.1| GENE 485 439408 - 439857 420 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 [Lactobacillus johnsonii NCC 533] # 1 146 1 146 147 166 55 1e-39 MSLLTTLNDDIKTAMKAKDKETLAVLRMLKTAIQNDQIKAGRELNGEEELTVLSREMKQR KDSLSEFEKAGRDDLVEKVKVEIAIVEKYMPQQLTEEEIRQLVQEVMTQTGATSPKDFGK VMGAMMPKVKGKADGNQVNAIVKELLQEN >gi|237663595|gb|GG668923.1| GENE 486 440040 - 441014 1243 324 aa, chain + ## HITS:1 COG:SP0948 KEGG:ns NR:ns ## COG: SP0948 COG1702 # Protein_GI_number: 15900827 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Streptococcus pneumoniae TIGR4 # 5 317 2 314 322 413 65.0 1e-115 MTDNQSKSLELILTDSDDAHMLLGTHDKHIKFLEENTHVTINSRGEVIQLIGESSEVELV ASVLRALQTLIQRGIKVHTPDVVSALKMAKAGNLEAFIAMYEEEIMKDHHGRAIRIKNVG QKKYIDAVKTHDVIFGVGPAGTGKTFLAVVMAVAALKKGEVQKIILTRPAVEAGESLGFL PGDLKEKVDPYLRPVYDALYQIFGMDHTNRLMERGVIEIAPLAYMRGRTLDDAFVILDEA QNTTVAQMKMFLTRLGFSSKMIVNGDTSQIDLPRGVTSGLVNAERTLKDIEKIAFVNFEA SDVVRHPVVAQIIQAYEKEQQKHS >gi|237663595|gb|GG668923.1| GENE 487 441043 - 443241 992 732 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762592|ref|ZP_02169656.1| ribosomal protein S21 [Bacillus selenitireducens MLS10] # 20 730 26 748 750 386 33 1e-106 MKKVLTKLGDRLGKAYLPILLAVFSLLLFMIMFGSVHQKRVEIKEGQLAEKTIRANKNIE NTYETEQRKKLAAEAVTPEYIYQEDTASVQHNRIDKLFKLIDSANEKVDKEYSNKQAKAK KEETIPAPTVEERVASLKSLFESLPQDEVTFYQSFPNVFYQTIFTLTSEQLDKVRSESLM LVDDAMQNHVRESDLDKIRQEANGKIQYLDITSTMQQVIRYIVNQGIVVNDIANEKRTEE LRQKAMNAVQPAMIYQGEIIVREGTQIDAKAVEKLELLGMTSQNTSIFPMVALALAILLQ VEVLIFFTKQVTEPSRQRSFIIFYTGAMLISVILMKFFQIFQTEQLMYIPLFYPAAFAPL ILNHFVNRRSGIIAAIFQVVFALFIFYNSIGTNSLTVILIMYLFSGFLATVVKRKRMSEQ VFPALMWVVVFPVFMAVVLMIYQGMSLTDGKTWTALICAGAGTVLSFLATMGLHPYIELL VTDDSMIVLNELSNPNHPLLKQLLEEAPGTYHHSMMVASLSANAVAEIGGRSLLTRVACY YHDIGKIKHANFFVENLPAGAENPHNFLLPEDSKQIIFGHVIDGAKILEEYNMPQMVIDI CRQHHGTTLMKFFYVKAKERNPEIKESDFRYPGPRPQTREAGIVSIADTCEAAVRAMDHP TNEKIQAFVHNVIQDRISDGQLDECGLTMKEIRIIEKSLINGLCSTFHSRIKYPKMKAEA EEMKDEQEKRDD >gi|237663595|gb|GG668923.1| GENE 488 443241 - 443720 680 159 aa, chain + ## HITS:1 COG:lin1502 KEGG:ns NR:ns ## COG: lin1502 COG0319 # Protein_GI_number: 16800570 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Listeria innocua # 1 159 4 161 161 175 64.0 3e-44 MDITFIDETEKVPTEEIKEIENLLQFAAGFLEIAEDTEMSVTFTDNAGIQVINRDYRGKD MPTDVISFALEDEGEDELPIIFDDEELAELPRNLGDLIISTERAAEQAVEYGHTLEREMG FLAVHGFLHLNGYDHMEPEDEKEMFGLQKEILDAYGLKR >gi|237663595|gb|GG668923.1| GENE 489 443698 - 444105 412 135 aa, chain + ## HITS:1 COG:L95012 KEGG:ns NR:ns ## COG: L95012 COG0818 # Protein_GI_number: 15673069 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Lactococcus lactis # 2 130 21 149 151 124 51.0 5e-29 MRMALKDEQTGKNKHFINSLEFAWQGIKTVFREERNMRKHVAFGVTAIVFGFLFSLTLAE WLWLLLAVFLVWLAEIINTIFENVVDMFTDFHFHPIGKKVKDMAAGAVLLTAGFAVLVGL ILFVPKILQIIQMWK >gi|237663595|gb|GG668923.1| GENE 490 444119 - 445021 1175 300 aa, chain + ## HITS:1 COG:SP0969 KEGG:ns NR:ns ## COG: SP0969 COG1159 # Protein_GI_number: 15900846 # Func_class: R General function prediction only # Function: GTPase # Organism: Streptococcus pneumoniae TIGR4 # 6 300 4 299 299 424 73.0 1e-119 MTTEHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFI DTPGIHKPKHRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFIIERLKNNNSPVYL IINKIDKVHPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQMPEGPQYFPD DQITDHPEYFIVSELIREKVLLLTRDEIPHSVAVVVDSMKRDENDKVHVQATIIVERDSQ KGIIIGKGGKMLKQIGTKARQDIEYLLDDKVYLELWVKVQKDWRDKKIYLQDFGYRKEEY >gi|237663595|gb|GG668923.1| GENE 491 445104 - 445898 722 264 aa, chain + ## HITS:1 COG:L1006 KEGG:ns NR:ns ## COG: L1006 COG1381 # Protein_GI_number: 15672040 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Lactococcus lactis # 1 253 1 251 251 239 45.0 3e-63 MALGETKGIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAHRKNNPLLPAILPFTEAVYI GNFREEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLVDAAIEDQHYDPNLFQFTHMA LSALNEQKDPEIITNIFEIQLLERFGVRPEWHHCVACGETQGKFDYSSRYSGVLCEKHWH LDEQRYHADPRAIHFIRLFSQVSYEKVQNIQVKEETKKSIRETIDMLYDEYVGLHLKSKK FIDQMKTWENTLKIPPRKKEEKET >gi|237663595|gb|GG668923.1| GENE 492 446667 - 447575 1038 302 aa, chain + ## HITS:1 COG:SP1475 KEGG:ns NR:ns ## COG: SP1475 COG0752 # Protein_GI_number: 15901325 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 302 1 302 305 533 84.0 1e-151 MKNKLTVQEMILTLQKFWSSNGCMLMQAYDTEKGAGTMSPYTFLRAIGPEPWNAAYVEPS RRPADGRYGENPNRLYQHHQFQVVMKPSPENIQELYLESLKLLGIDPLEHDIRFVEDNWE NPSMGCAGLGWEVWLDGMEITQFTYFQQVGGLQCHPVTSEITYGLERLASYIQEVESVYD LEWTQGVKYGEIFVQPEYEHSKYSFEISNQEMLLENFDKFEKEAKRCIEESLVHPAYDYI LKCSHTFNLLDARGAVSVTERAGYLARIRNMARSVAKIFVAEREKLGFPLLNKDQSVSKE AE >gi|237663595|gb|GG668923.1| GENE 493 447577 - 449661 2727 694 aa, chain + ## HITS:1 COG:lin1495 KEGG:ns NR:ns ## COG: lin1495 COG0751 # Protein_GI_number: 16800563 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Listeria innocua # 1 694 1 688 688 671 48.0 0 MAKDLLLEIGLEEMPAHVVTPSRIQLEEKVIKFLDEHHLDYETVQSFATPRRLAVKVTAI PEKQADVEEEVKGPAKKIALDAEGNWSKAAQGFVRGQGVTTEDIVFKELNGVEYVYVTKF TKGQSAKEVLTKLNDVITSLTFPVTMHWANYDFEYIRPIHWIVALLDDEVIPFKVLDVTT GQTSRGHRFLGDDVTFQHANEYEAKLKEQFVVVQPNERKQMIVDQANALAAEKNWQLALD EELLEEVTNLVEYPTAFVGSFDEKYLSVPDEVLVTSMKEHQRYFEVRNDQGLLMPHFIAV RNGDNVHLENVIKGNEKVLIARLEDAEFFYNEDKKLTIEACVEKLKNVTFHEKIGSIYEK MQRVALIAQIIGRKVGLSEEELEDLKRASEIYKFDLVTNMVGEFPELQGIMGEKYALLQG EKPAVATAIREHYLPTSSEGELPETAIGAVLALADKLDSVFSFFSVGMIPTGSNDPYALR RQTYGVIRIIEDKGWTFPLVQLQTEVDEAVNQDVEKYGVLLNEGQAEVVEFVKARLRQLL MTKNVRHDIIDAVVSAEQADLSKLFASANILKSRFEDQDFKPSMEALTRVINLAKKGQEL LGDTEEGIDPSLFENKAEKELYQAVNDLSEAFATRTIAENYEALVNLRPLIDAYFNETMV MVEDEKVKQNRLKQLMQIAKMALSIASLDLLIVK >gi|237663595|gb|GG668923.1| GENE 494 449701 - 449892 265 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519876|ref|ZP_03949925.1| ## NR: gi|227519876|ref|ZP_03949925.1| conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis TX0017] # 1 63 1 63 63 108 100.0 2e-22 MSETTFEQILTQLSKPAVRALTNEKIDSVDELYARGRKALLSLHGFGPKSIRTIEEMTGK ELK >gi|237663595|gb|GG668923.1| GENE 495 449925 - 450857 1103 310 aa, chain - ## HITS:1 COG:SPy0351 KEGG:ns NR:ns ## COG: SPy0351 COG0706 # Protein_GI_number: 15674505 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Streptococcus pyogenes M1 GAS # 4 310 5 307 307 261 46.0 1e-69 MRKLNRWLYGSGLLFLVMFLSGCVKTGADGQPTGEGFVYNFLVLPMSNAITYLVDNFNWN YGWAIIFITIIVRIIILPLGLHQSKKSFIQTEKMQAIKPQVDVAQAKMKQASTREEQMAA QAELQRIYKENNVSMVGGIGCLPLLIQMPIFSSLFFAARYTKGIATASFLGMNLGQPNMI LVALAGLAYLAQGYISMIGIPEEQKKTMKSMLIVSPLMIVFMSFSSPAGVALYWVVGGIF TCIQSAITNILLRPRIKKQVQEELKNNPPKQVVTPIKDVTPKETNKVTQKTNQPKANGNK GRNAGKQKRK >gi|237663595|gb|GG668923.1| GENE 496 451024 - 451299 428 91 aa, chain - ## HITS:1 COG:lin1418 KEGG:ns NR:ns ## COG: lin1418 COG1254 # Protein_GI_number: 16800486 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Listeria innocua # 6 90 8 92 93 75 45.0 2e-14 MEKLRMNVQGRVQGVGFRYMTKMVADQLGVTGSVKNEDDGSVSITAMAPEDIMETFIKKI KDSPSPAGRVTYVDIQEDPLLEETEQFKVIQ >gi|237663595|gb|GG668923.1| GENE 497 451406 - 452182 206 258 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 26 252 3 240 255 84 27 9e-15 MKEITSTKNNQLKEWKKLHKKKYREELNQYIIEGFHLVEEAVKANADVQWILFNQRGQQE WGTWLAEQETEKLIFVSDEVLNSLSELPTSQGILAIVTLETQQEQSLSFKGGWLLLDNIQ DPGNVGTMIRTADAAGLAGVILGKGTADIYNTKVLRSMQGSHYHLPVLQRELTEVVQAFK KQGLPVFGTELNEAAIAYYEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMKGQAES LNVAIAAGVLMFYFQNNQ >gi|237663595|gb|GG668923.1| GENE 498 452202 - 452639 550 145 aa, chain + ## HITS:1 COG:CAC1468 KEGG:ns NR:ns ## COG: CAC1468 COG0454 # Protein_GI_number: 15894747 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 9 142 4 140 142 96 37.0 2e-20 MLTIKKTTQLTEKELETIMAIWLQTNLEAHPFVAPTYWQENKAFVRAALPKATLILAEEE DQIIGFLGLMDNYIAGIFIKKAFQGKGIGQKLLQVAKEEQDVLSLAVYRENQAAYAFYQK QGFVQQKRTIDETGNEECHLVWQAQ >gi|237663595|gb|GG668923.1| GENE 499 452823 - 453608 1336 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29376895|ref|NP_816049.1| 30S ribosomal protein S2 [Enterococcus faecalis V583] # 1 261 1 261 261 519 100 1e-146 MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKLVDAAYDYMKNV AEEGGVALFVGTKKQAQEAIKDEAIRAGQYYVNHRWLGGTLTNWDTIQKRIARLKKINAM EEDGTFEVLPKKEVAGLNKERERLEKFLGGIADMPRIPDVMYIVDPRKERIAVQEAHKLN IPIVAMVDTNCDPDEIDVVIPSNDDAIRAVKLITAKMADAFIEGNQGEDQATEELFVEET PEATSIEEIVDVVEGNNESAE >gi|237663595|gb|GG668923.1| GENE 500 453714 - 454595 582 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 287 1 275 283 228 44 2e-58 MADVTAKMVKELRDMTGVGMMDAKKALVKVEGDMEKAVDFLRENGMAKAAKKNDRIAAEG LANVATVGNVAAIVEVNSETDFVSKNEMFQDLVKDIATKVAENKPATMEEAMAIKTEKGT IESDLIEATTVIGEKISFRRFEVVEKADNAAFGAYLHMGGRIAVLTVIDGTTDEEVAKDV AMHIAAINPRYVNESQIPQEELEHEKAVLTEQALNEGKPANIVEKMVVGRLQKFKAEIAL VDQPFVKDPDMTVEKFVASKGGEVKSFVRFEVGEGIEKREDNFADEVMSQMKN >gi|237663595|gb|GG668923.1| GENE 501 454856 - 455578 1010 240 aa, chain + ## HITS:1 COG:lin1350 KEGG:ns NR:ns ## COG: lin1350 COG0528 # Protein_GI_number: 16800418 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Listeria innocua # 1 240 1 241 242 358 76.0 5e-99 MVKPKYQRVVLKLSGEALAGEDGFGIKPPVIKEIVQEIKEVHELGIEMAIVVGGGNIWRG QIGAQMGMERAQADYMGMLATVMNALALQDTLENLGVPTRVQTSIEMRQIAEPYIRRRAE RHLEKGRVVIFAGGTGNPYFSTDTTAALRAAEVDADVILMAKNNVDGVYSADPRVDETAT KFEELTHLDVISKGLQVMDSTASSLSMDNDIPLVVFNLNEAGNIRRAILGENIGTTVRGK >gi|237663595|gb|GG668923.1| GENE 502 455582 - 456139 925 185 aa, chain + ## HITS:1 COG:lin1351 KEGG:ns NR:ns ## COG: lin1351 COG0233 # Protein_GI_number: 16800419 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Listeria innocua # 1 185 1 185 185 213 70.0 2e-55 MSKEVLATAKEKMTKAEESLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIP EARVLMITPFDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKE AENSKVAVRNVRRDAMDELKKAQKNGDITEDELRSFEKDVQKLTDDSIKNIDAITAEKEQ ELLEV >gi|237663595|gb|GG668923.1| GENE 503 456509 - 457279 194 256 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 228 1 221 245 79 27 2e-13 MSVLEIKNLHVSIEDKKILKGVDLTINTGEIHAIMGPNGTGKSTLSAAIMGNPNYEVTEG EILFDGVNVLDLEVDERARLGLFLAMQYPSEIPGITNAEFMRAAINAKRDEDNKMSVMQF LKKLDSKMELLNMPEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFAILDEIDSGLDIDA LKVVSKGVNEMRGENFGALIITHYQRLLNYITPDVVHIMMEGRVVKTGGADLAKRLETEG YAGISQELGIDYKEEA >gi|237663595|gb|GG668923.1| GENE 504 457294 - 458580 1587 428 aa, chain + ## HITS:1 COG:SPy0287 KEGG:ns NR:ns ## COG: SPy0287 COG0719 # Protein_GI_number: 15674461 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Streptococcus pyogenes M1 GAS # 11 426 4 417 420 491 59.0 1e-139 MKKVNLMDYLDEVTAFSLEHEEPAWMTELRTTALKNADESELPHIDRVKFHRWPLLNVHM ESYVPSEGNVASFDQMKDNPLIVQQGSFHAFEQLPASLAEQGVIFTDIFTALQEHPELVK EYYMTKAVLPEEDKLTAAHAAFMNSGVFLYVPKNVVIEEPIESLFIQDSDSNQPFFKHVL IVADNHSEFSYLERFQSTGHHAEKASGNIVVEVIAKDGAKVKYSAVDQLGQTVTTYMNRR GYIMRDASVDWALGVMNDGDVVADFDSDLVGEGAHSEVKVVAISAGKQTQGIDTRVTNKA PHSIGHILQHGVIRERGTLTFNGIGHILKGAKGADAQQESRVLMLSDKARGDANPILLID ENEVTAGHAASVGRVDPEEMYYLMSRGLRKEEAERLVIRGFLGSVITAIPVKEVQNEFVE VIEGKLNA >gi|237663595|gb|GG668923.1| GENE 505 458577 - 459812 1476 411 aa, chain + ## HITS:1 COG:L32195 KEGG:ns NR:ns ## COG: L32195 COG0520 # Protein_GI_number: 15673773 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Lactococcus lactis # 7 406 5 402 405 585 73.0 1e-167 MMDAATIRQSFPILFQEVNDEPLVYLDNAATTQKPLAVLDVLRHYYETDNANVHRGVHTL AERATKDYEASREKVRQFIHAKETAEVLFTRGTTTSLNWIAKSYGDLAVTAGDEIVISYM EHHSNIIPWQQLAQRTGAILKYIDVTEDGFLDMASARQQITEKTKIVSIAHVSNVLGVIN PIEELTQLAHQNGAVMVVDGAQAVPHMPVDVQAIDADFYAFSGHKMCGPTGIGVLYGKRH LLEQMEPVEFGGEMIDFVHLQESTWKELPWKFEAGTPNIAGAIALGAAIDYLTEIGLEAI HQHEAALVHYVLPKLQAIEGLTIYGPQDPKDHTGVIAFNIEGLHPHDVATALDMEGVAVR AGHHCAQPLLNYLSVPATARASFYLYNTKEDADRLVEAIKATKEFFQHGTF >gi|237663595|gb|GG668923.1| GENE 506 459799 - 460266 621 155 aa, chain + ## HITS:1 COG:SPy0289 KEGG:ns NR:ns ## COG: SPy0289 COG0822 # Protein_GI_number: 15674463 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Streptococcus pyogenes M1 GAS # 1 147 1 146 159 164 57.0 7e-41 MALSKLDNLYRQVILDHSSHPHHHGTLDASSQTIELNNPTCGDVIELDVAIEDGVIKDIA FQGSGCSISTASASMMTDAVLGKTIAEATALAEDFSQLVQGNEVAEDEKLGDAAMLSGVA KFPARIKCATLAWKALEQAVANNGQGEAGHLHCEK >gi|237663595|gb|GG668923.1| GENE 507 460285 - 461679 1585 464 aa, chain + ## HITS:1 COG:SP0871 KEGG:ns NR:ns ## COG: SP0871 COG0719 # Protein_GI_number: 15900754 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Streptococcus pneumoniae TIGR4 # 6 464 12 470 470 802 87.0 0 MSTVPELEEYKFGFHDDVEPVFSTGDGLTEDVVREISRVKGEPEWMLDFRLKSLEQFNKM PMQEWGPDLSDIDFSKIKYYQKPSDKPARDWDDVPDKIKETFEKIGIPEAERAYLAGASA QYESEVVYHNMKEEFEKLGIIFTDTDSALKEYPDLFKEYFSKLVPPTDNKLAALNSAVWS GGTFIYVPKGVRVDVPLQTYFRINAENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSL HAAIVEIFTRKDAYCRYTTIQNWSDNVYNLVTKRAKAYEGATVEWIDGNLGAKTTMKYPS VYLDGKGARGTMLSIAFAGANQIQDTGAKMIHNAPNTSSSIVSKSIAKDGGEVNYRGQVT FGKDSAGSISHIECDTIIMDEKSKSDTIPFNEIHNSQVSLEHEAKVSKISEEQLYYLMSR GLSEAEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG >gi|237663595|gb|GG668923.1| GENE 508 462429 - 463271 579 280 aa, chain + ## HITS:1 COG:all1075 KEGG:ns NR:ns ## COG: all1075 COG1192 # Protein_GI_number: 17228570 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Nostoc sp. PCC 7120 # 5 204 2 227 294 96 30.0 5e-20 MSKNGKVISIINMKGGVGKTALSVGISSFLSEKKDEKVLLIDSDPQFNATQAFIDPEDYL KSEKTIFKLFKPQTELHQSFVMPKREELVTKINKNLDILMGDLNLVLVNKSSDSGLIKRL KRFITKNNLRNYYDYIIIDCPPTLTLYTDSALVSSDYYLIPNRIDRYSNIGISSLNRAIG DLIDQEDLELKCLGLIYTMVQNHLSDKQKEVKAELESNKAMENIYVFKSSTSLVNDMQVG KQGPIATRYAKSNKDISDVVDELQALLSKNSSKEGVTVDG >gi|237663595|gb|GG668923.1| GENE 509 463264 - 463614 259 116 aa, chain + ## HITS:1 COG:no KEGG:EF2386 NR:ns ## KEGG: EF2386 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 116 1 116 116 162 100.0 6e-39 MDNRFLYRSSLKSKDIPKFQMMGITSELILSKQVFPKNIEITSFLNVVFNVEFKNYVMKS RTLILSRTVRVIEGCSENEYQNYRRKLLNFVEEYYESEEVSKNISKSSISKWVTGE >gi|237663595|gb|GG668923.1| GENE 510 463619 - 464491 178 290 aa, chain + ## HITS:1 COG:no KEGG:EF2385 NR:ns ## KEGG: EF2385 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 290 1 290 290 515 100.0 1e-144 MYNHVYLKEDIDALINEFGKLNAEDESLFRFLSKKIIFLKEIKISIVNTTVIFYIDQMIS DLMYLMASYHKGEVRYFYLNIRSVIEAFSRLFSEVETSTNRITMTTLLDNIANYITLNDL RDSKEDSLDYPRLKGLYRECCLYVHGNINAKYSLIEFYNELLNEEITSAQKRKMSNDIKF LASILTNISCYRYSITLNDVFFRGKNKLGYLIGEFGVKIVKSYSNFIFSCLSGGESIYNV VLTSKKGSKLKVIDFNSDEYEMSYCFRPDTLFFEDYDVYSKCILKKKSYR >gi|237663595|gb|GG668923.1| GENE 511 464791 - 465393 711 200 aa, chain - ## HITS:1 COG:HI0522 KEGG:ns NR:ns ## COG: HI0522 COG2364 # Protein_GI_number: 16272466 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Haemophilus influenzae # 5 198 24 211 218 80 26.0 2e-15 MKLVKNVLLILIGLVIIGIGASTLRVAGLGVDPFTAMNIGLSSMFGMQLGIFQIIVNAFI LFYVYLKNKKAIGLGTILNMLLVGILIQQISTWLQPYANSLGGSTIGKLLSLFVGVLIFT FGCALYMATDQGESPYDAIAPTICQQTNKPYASVRKAQDLLVLLIGFIAGGPIGIGTIIC AFGAGPLISFWNKLLQPLVK >gi|237663595|gb|GG668923.1| GENE 512 465478 - 466257 245 259 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 246 4 238 242 99 31 3e-19 MYGELHGKVAVVTGAATGLGLFITLRYILEGMNVVADYVGELPKEFEDVQAKHADRVKFV KADVSNEEDIKALAETALKEFGHVDIWVNNAGVEASFPTIDMPLKEWQRVIDVNLNGVFL GSREALRIFRDQKIKGSIINMSSVHQRIPWPTFAHYAASKGATEMFTKTIALEYAEYGIR ANCIAPGAINTPINAEKFSDPEQLKQTTSMVPMGIIGKPNQVAAAAAWLASDESSYVTGT TLFVDGGMSLYPSFQHGAG >gi|237663595|gb|GG668923.1| GENE 513 466294 - 466389 102 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVAHVNQRVDKIRQTVGKVYGLKLATIVEGL >gi|237663595|gb|GG668923.1| GENE 514 466674 - 467942 1341 422 aa, chain + ## HITS:1 COG:SP0263 KEGG:ns NR:ns ## COG: SP0263 COG0750 # Protein_GI_number: 15900197 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Streptococcus pneumoniae TIGR4 # 1 422 1 418 419 414 51.0 1e-115 MKTIITFIIVFGILVLVHEFGHFYFAKRAGILVREFAIGMGPKIFAHRGKDGTTYTIRLL PIGGYVRMAGMGEDMTEITPGMPLSVELNAVGNVVKINTSKKVQLPHSIPMEVIDFDLEK ELFIKGYVNGNEEEETVYKVDHDATIIESDGTEVRIAPLDVQFQSAKLSQRILTNFAGPM NNFILGFILFTLAVFLQGGVTDLNTNQIGQVIPNGPAAEAGLKENDKVLSINNQKIKKYE DFTTIVQKNPEKPLTFVVERNGKEEQLTVTPEKQKVEKQTIGKVGVYPYMKTDLPSKLMG GIQDTLNSTTQIFKALGSLFTGFSLNKLGGPVMMFKLSEEASNAGVSTVVFLMAMLSMNL GIINLLPIPALDGGKIVLNIIEGVRGKPISPEKEGIITLIGFGFVMVLMVLVTWNDIQRF FF >gi|237663595|gb|GG668923.1| GENE 515 468014 - 469732 2270 572 aa, chain + ## HITS:1 COG:lin1356 KEGG:ns NR:ns ## COG: lin1356 COG0442 # Protein_GI_number: 16800424 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Listeria innocua # 1 564 1 564 568 724 62.0 0 MKQSKMLIPTLREVPNDAEVLSHQILLRAGYIRQVAAGIYSYLPLANRVLEKLKTIMREE FEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETFTELIRD EINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKA YSRIFERCGLEFRAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLEMATSLY TPKKSHETQLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLFIADEEPVMVLVRGDHDV NDVKLKNFLGADFLDEATEEDARRVLGAGFGSIGPVNVSEDVKIYADLAVQDLANAIVGA NEDGYHLTNVNPDRDFQPISYEDLRFVQEGDPSPDGNGVLAFTKGIEIGHIFKLGTRYSD AMGATVLDENGREKSVIMGCYGIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNV KDEYQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRITVGKKAVDGVVE VKIKRTGEMLEVRKEELESTLSILMNTTSEVE >gi|237663595|gb|GG668923.1| GENE 516 469983 - 474338 4561 1451 aa, chain + ## HITS:1 COG:lin1357 KEGG:ns NR:ns ## COG: lin1357 COG2176 # Protein_GI_number: 16800425 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Listeria innocua # 3 1448 6 1444 1444 1832 61.0 0 MTEKARDLFDKLMTQIQLDDTAKEHPLIQNGRIDKVIVHQQSRLWEFHLSFDELMPVMLY QTFMQQLELAFQQIAQVSVQITTNQTTFTEEQLTDYWQLALLNSQCNTPLVQKVLKTQTP QFEDRKIILPVDNEAVIPYLKQQYLPIIEELYFSYGFPKFHIEPKMDQQQAAEVLKKFEE QKLEQAAAFQQQAAESLVKHEQMKKEKQQQAPAFDGPIRLGRNIPNDEPIMPMGNILEEE RRITIEGFIFDKEVRELRSKRKILILKITDYTSSFVVKKFSNGEKDEQVFDAIQPQSWIR VRGSVQEDTFMRDLVMNAQDLMEVAHAPRKDYAPEGEKRVELHMHSNMSTMDATNKVGDL VAQAGKWGHKAIAITDHGGAQAFPDAHAAGKKAGVKILYGVEANIVDDGVPIAYNEEHIE LTDATYVVFDVETTGLSAVYDTIIELAAVKMHKGNVIETFEQFIDPGHPLSQTTINLTGI TDEMVRGSKSEEEVLRMFKEFSEGTILVAHNASFDMGFLNTSYGKHGIPEAANPVIDTLE LSRFLYPHFKSHRLNTLSKKFGVNLEQHHRAIYDSESTGHLCWIFLKEAKENHDMHFHDD LNRHIGEGDSYKRARPFHATILATTQAGLKNLFKLISMSNVDYFFRVPRIPRSQLSKLRE GLLIGSACSNGEIFEAMMQKGVEEAKNRAKFYDYIEVMPKPVYAPLIEQELVKNEADLEE IISNLVKIGDELGKLVVATGNVHYLNEEDAIYRKILVGSMGGANPLNRHSLPKVHFRTTD EMLTEFQFLGQDIAKRIVVENPNKVADLCEEVIPVKDDLYTPKIPGSEQEITDLSYNRAR ELYGDPLPEIVEKRLEKELNSINGNGFSVIYLISQKLVHKSNEDGYLVGSRGSVGSSFVA TMTGITEVNPLAPHYYCPECQYSEFYEDGSYGSGFDMPEKACPKCGARLFKDGHDIPFET FLGFHGDKVPDIDLNFSGDYQAEAHNYTKVLFGEEYVYRAGTIGTVADKTAYGFVKGYER DHNLHLRGAEIDRLAKGSTGVKRTTGQHPGGIIVIPDYMDVYDFTPIQYPADDQEAEWKT THFDFHSIHDNILKLDILGHDDPTVIRMLQDLSGIEPKTIPTDDPEVMRIFEGPDVLGVD AEQIYSKTGTLGIPEFGTRFVRGMLEQTHPSTFAELLQISGLSHGTDVWLGNAEELIRRG EANLAEVIGCRDDIMVYLIHAGLDSGMAFKIMETVRKGQWNKIPDELRDTYLNAMKENNV PDWYIDSCSKIKYMFPKAHAAAYVLMALRVAYFKVYFPILYYCAFFSVRADDFDLVAMSQ GKEAVKARMKEITDKGMDASTKEKNLLTVLELCNEMLERGYKFGMIDLYKSDAENFVIEG DTLIAPFRAVPSLGLNVAKAIVAAREEQPFLSKEDLATRGKVSKTLIEYMNENGVLKDLP DENQLSLFDML >gi|237663595|gb|GG668923.1| GENE 517 474550 - 476007 1501 485 aa, chain + ## HITS:1 COG:L119780 KEGG:ns NR:ns ## COG: L119780 COG0531 # Protein_GI_number: 15673092 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Lactococcus lactis # 1 477 1 477 488 682 76.0 0 MDKKQLRWFTVGLIAFNMVWGLGNVVNNYAQQGISVVTSWLLILVLYFIPYALIVGQLGS TFKDSNGGVSSWVQNTSTKRLAYYAAWTYWVVHIPYLAQKPQAILIALGWAVQGNGNLVN TMPIVTVSFISLIIFLVFLLLSTKGLTTLKVIGGLAGTAMFVMSILFILLAVGAPFINST VEFATPNMSQVSTYIPKFDFSYFTTVSMLVFAVGGAEKISPYVNATKNPAKEFPKGMIFL AAMVGLSAVLGSFAMGMLFSSDNIPKDLMANGAYSAFQKLGAYYGVGNLLMIVYALTNTV GQVAALAFSIDAPLKILLAEADPEFVPSWLRKRTKKGTLINGYLLTGILVSIIIALPMFG LKDMNEVVKWLTNLNSVVMPMRYLWVFFAYMLLNKAYKQFNSEYKFVKNPKIGFVFGLWC FLFTAFACILGMVPKFEYASDPQGWLFQLASNIVTPIVLILLGMILPAIARREKKDTILP IDSAE >gi|237663595|gb|GG668923.1| GENE 518 476226 - 477539 1237 437 aa, chain + ## HITS:1 COG:no KEGG:EF2376 NR:ns ## KEGG: EF2376 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 437 1 437 437 717 100.0 0 MTKTLETQPEEKTVFLCKETNPDFLGREIYADNVETPYNFYLIRKLYLAKEYQNLAEGEQ FFEALCESWDESEQFEELIVKKIYVYVETELMYYTVYFGSFEPTTRDLRSALKQWMYEIP TTKNKKTVRMNETNVQVVPQENQLTELAGEIAVLREMLTLLKENLASLNEAVNQTRNPVI SRQIKTIHLKRASPVIAAEQASLKVSEDTNLEQPDVNLSPDNRENQEGETTVATSEPAPI KEALPEKKQENQQSTAAKPLFTFPQETEKSSLNSVNKSAEKEEEQKPEKEAVSMESEKEN SSSRTIPADFQRQLDELEEEIYRRFMSRHLEDTDGNQAVPKITIEKRQLEAQMFEAKAFS QSFKQVQKKKAGDVRICNQLSCMKLEKGLDKFLDEVTEYVEKRTLFNKKVRCPLPVIREL EGYGQLNQYMQKILDCY >gi|237663595|gb|GG668923.1| GENE 519 477738 - 480509 2349 923 aa, chain + ## HITS:1 COG:BH1691_2 KEGG:ns NR:ns ## COG: BH1691_2 COG1199 # Protein_GI_number: 15614254 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Bacillus halodurans # 255 921 36 716 716 307 30.0 5e-83 MKDKQVYAVVDLETTGTDPTSDRIIQFGCVLVQDGKIIANFATDVNPNQVVPKQIQSLTG ISNTQVQKAPYFEDVAHTIYHYLEDTIFVAHNVHFDYNFLARELVRCGTPPLTIPAIDTV ELAQIFLPTEKSFRLSDLSESLGLSHENPHQADSDAQVTAELLLLIQEKMKSLPLVTMEK IAELSQQTARETSAFIQQTYEQMKKQVTPLNPAYQVVSGIALRKKEVPLFEETFYQTSTY PKTKKAKEKLFGERFAYRAEQSRMMNLVYDHFTEGTTKDLFIEAATGTGKTLGYLLPMSY LATPEKPVIISTVSIVLQNQLVEKDLPLANQICQGKLRGIVIKSHRHYLDLQCFKATLNQ PTPQKQYALYQMGVLVWLLETETGDLDELQLTNLNHLFWKEVTHRGLDFLSKKDELYEVD FLRHLYKKVAQSNVLIVNHAFLAQESLRKQPLLPESPWLIIDEAHHLPDIASRMASERVN SVILKKQVTHFIEKEQLFVALQQIFQQFSEEQRFVKIYQQGLLDFVDEWQDFLFELHRLF SKTQKRIDHQELLLTKERIDYLSAAGEKHSQTLQLLLQELLTIQSKLQQTIMSQLETFSL ADRIVFVRLFQFFDEIERIHHCFTIYLDDWRPRWVKEYLPQNEDHGLIEIHDLEASLLPE TKWYPRYERIIYTSGTLKFGNNKKYLPQRLGLTEVTFKTLPTPYNYAENARVYVPEEAVA IQNASSYEMGQYISDTIEKLMAQEERSMLVLFTSHELLSTVYHQVQPRLLEKGQEVLAQG ISGSREKILKRFSNGKPNVLLGADSFWEGVDLPGTALQLLIVTRLPFENPKRPLVQAKYA YLEAEGIQPFAQEAVPKAALRLRQALGRLIRSEEDRGALLILDRRLVTAKYGKRLIKAFP KGLSVKEAPMPEILEELKEFLNK >gi|237663595|gb|GG668923.1| GENE 520 480597 - 481103 549 168 aa, chain + ## HITS:1 COG:lin2012 KEGG:ns NR:ns ## COG: lin2012 COG5353 # Protein_GI_number: 16801078 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 32 160 35 165 173 74 35.0 7e-14 MEELEEKKEKKRITVLLTLLAILLAILVTIIIFFVRTNQPMAQAKKEATAIAKTSANLET VDKFYWFTRKNTYFTLTGKNDKGTEIVVIVPKSGEKVTVLNQKDGQTEQQITDIVAKAHP DESVMKATLGLYDKRPAWEVVTENDQGVLTYYLMSFDKGEEINVVKDI >gi|237663595|gb|GG668923.1| GENE 521 481142 - 482341 1199 399 aa, chain + ## HITS:1 COG:SP1544 KEGG:ns NR:ns ## COG: SP1544 COG0436 # Protein_GI_number: 15901387 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 390 1 390 395 527 67.0 1e-149 MNVSNRAQQLTPSVTLAAAAKAKALKAKGVDVLSLTVGEPDFVTPKNIQKAAIASIEDGR ASYYTPSGGIPELKQAIVSYVEREYQLRYQPKQVIVTDGAKYALYLLFQAILNVGDEVII PVPYWVSYGEQVKLAEGKPVFVSSTQEQSFKVSVAQLEAVRTDKTKAIILNSPSNPTGVI YTEEELRQIGEWAVAHNILIIADDIYGRLVYNGHRFTPIATISEAIRQQTIIINGVSKTY AMTGWRIGFAVGDEKIIQAMTQLASQSTSNPVAVSQYAAIEALTGEQSTVEDMRQAFEKR LNHIYPKVAALPGVSLIKPEGAFYLFPNVKKTLEICGYDNVTNWVEDLLQEAHVALVTGE GFGAPEHVRMSYATDLMTLEKAIERMNDFIEKKRIQHNA >gi|237663595|gb|GG668923.1| GENE 522 482376 - 483710 1462 444 aa, chain + ## HITS:1 COG:L0345 KEGG:ns NR:ns ## COG: L0345 COG0017 # Protein_GI_number: 15673810 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Lactococcus lactis # 4 444 5 447 447 666 71.0 0 MEQIQIIDSNKHVGETVKIGAWIANKRSSGKIAFLQLRDGTAFFQGVVFKPNFIEAFGEE AGTEKFQEIKHLSQETAVMVTGVIKEDSRSKFGYEMDITDLEVVGASEDYPITPKEHGTD FLMDHRHLWLRSSKQHAIMLVRNEIIRATYEFFNEQGFIKIDSPILTGSAPEGTTELFET DYFGQPAFLSQTGQLYAEAGAMAFGKVFTFGPTFRAEKSKTRRHLTEFWMIEPEMAYTTH EESLDIQEAYVKHLIKSVLKNQQYPLDVLERDTALLEKYVSEPFKRITYDDAIELLQKEE ANNDYDHIEWGEDFGSPHETFISNYYGVPTFILNYPKAIKAFYMKPHPTREDVVICADLI APEGYGEIIGGSERATDYDYLKEKVAEFGLSEEEYSWYLDLRKYGSVPHSGFGLGLERAV TFITGNEHIREAIPFPRMLNRIYP >gi|237663595|gb|GG668923.1| GENE 523 483758 - 484717 1052 319 aa, chain - ## HITS:1 COG:CAC3400 KEGG:ns NR:ns ## COG: CAC3400 COG0673 # Protein_GI_number: 15896641 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Clostridium acetobutylicum # 7 317 5 315 322 321 50.0 1e-87 MTKKLYQWGIVGLGGIAHEFASTFKQETSQLAAVASRTLSKAEQFAADYSIPKAYGSYEE LLADETIDVVYIAVPNKQHAEHILKALQAGKHVLCEKAITMNAAELKQALAVAEKNDLIL AEAMTIFNMPLYDELRRLMDAGKFGQLKMIQAPFGSYKEPDPKNRFFNPDLAGGALLDIG TYAVSFARWFLSSQPDVLASSMVPFSTGVDEQSVTLLRNKENELATISLTFQAKMPKQGI VAFEDAYITITDYPRADEAIVHYNDGTVETIVSGYSAEAMNYEIYNMVEAIKGTQPNRSL FFTTEVIDILDQMQKLWQN >gi|237663595|gb|GG668923.1| GENE 524 484890 - 485408 683 172 aa, chain + ## HITS:1 COG:no KEGG:EF2369 NR:ns ## KEGG: EF2369 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 172 1 172 172 313 100.0 1e-84 MHQVYVDIIVDAIIEQYQTEENFYSAYQIQAADWQAWKEGQFGLDNEVMQKIKNLFTDYE WMLTQKILRQTILFPEKRNLAVSEYKRLKTTIAKKWLQSDLGVVELIPNNKQEQEIAAGY IDLKVTLAYGEWGFDDIITFRLPATIQRQLEGSKVELLDWVNENLMDTYVGE >gi|237663595|gb|GG668923.1| GENE 525 485429 - 485647 254 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKYTIAGILSVIIMFGAVIFVFFGKKPVEESVHTSTETTVKSSTEISESSTVSSTATTES STEITSVSSDES >gi|237663595|gb|GG668923.1| GENE 526 485692 - 485763 56 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSITKVKDSETFYRKIKDEVGN >gi|237663595|gb|GG668923.1| GENE 527 485747 - 486388 701 213 aa, chain + ## HITS:1 COG:L2183 KEGG:ns NR:ns ## COG: L2183 COG1705 # Protein_GI_number: 15673347 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Lactococcus lactis # 12 213 7 205 209 172 45.0 4e-43 MKWGINEVSNYQKKRKKQLNLPKLFLGVVVVGLAFVFSLSVLSDSDKGQSESVNRQNENI SKEEFVAEITPYARELQESYGVLPSIIMGQAVLESNFGQSQLASKYNNLFGIKAYGNQPK VNLETKEYVNEVWITIQGDFRVYDNWEESMRDHTKLFVDGVDWDPNLYEKVLLAKNYKEA AQALQDAGYATDPTYADKIIHVIEEYNLNKYDR >gi|237663595|gb|GG668923.1| GENE 528 486408 - 487040 937 210 aa, chain + ## HITS:1 COG:no KEGG:EF2366 NR:ns ## KEGG: EF2366 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 210 1 210 228 367 99.0 1e-100 MSEKWIPEIMTPLKQDIVKMPEIIRQASGIKIFGRKIKSIIFTTDIAIIRNTDAQAVIAV YPFTPHPAITKGIIEAADIPVFSGVGGGLTQGMRSAYMSLFAEAQGSMGVVLNGPTPIET IKMVDEAIDIPIISTVTSIHTPIDGKLAAGVDMINISAGKDTAATVRYFRGKYPELPIIA TGGPTESSIHETIIAGANAITYTPPSNGEF >gi|237663595|gb|GG668923.1| GENE 529 487547 - 488128 807 193 aa, chain + ## HITS:1 COG:SPy1136 KEGG:ns NR:ns ## COG: SPy1136 COG0503 # Protein_GI_number: 15675113 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Streptococcus pyogenes M1 GAS # 1 193 1 193 193 242 68.0 3e-64 MKELVERIKNDGRVLGEGVLKVDSFITHQVDPELMEAMGNRFAEVFAEAGITKVITIEAS GIAPALYAAQKLGVPMIFARKAKSLTMDEELLTASVYSFTKQVTSQISISRKFLSDADKV LIIDDFLANGQAAKGLVELCQQAGAKVEGIGIVIEKSFQDGRQLLEDMGLNVVSLARIAS LSEGTVTFLEEDA >gi|237663595|gb|GG668923.1| GENE 530 488131 - 489450 432 439 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 18 438 15 428 447 171 27 6e-41 METKQLNTPQQTETPNGKAAVLGLQHLLAMYAGAVAVPLLIGTGLNFDSQQMTYLISIDI FMCGVATLLQLTVNKFFGIGLPVVLGCAIQAVAPLIMIGTNKGVGAIYGSIIASGIFVVL IAGFFSKIKRLFPPLVTGTVITVIGLTLIPVAVEKMGGGLATDKSFGDPKNLLLAFVTIA LIIVVQVWGRGFIKSIAVLIGLVGGTILAAFLGLVDLSPVGQATWFHFPQPFYFGKPTFD LSSIVLMIIISIVSMVESTGVYFALGDITGKKIGEDDLRRGYHAEGLAVILGGIFNTFPY TGFSQNVGLVQLSGIKTRRPIYFSAFFLIILGLLPKIGAMAQIIPEPVLGGGMLVMFGMV AVQGMRMLSKVDYSNDKNLLIIAISIGFGLGFNIMPTLFNKVPETVSMFTGNGIVMSSIT AIILNLLFNGLKETSESNE >gi|237663595|gb|GG668923.1| GENE 531 489647 - 489751 61 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no METLLALEVEPFSLYHVKRALLKARLRRETAEGF >gi|237663595|gb|GG668923.1| GENE 532 489778 - 490893 1245 371 aa, chain + ## HITS:1 COG:lin1886 KEGG:ns NR:ns ## COG: lin1886 COG0026 # Protein_GI_number: 16800952 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Listeria innocua # 20 370 19 373 374 357 48.0 2e-98 MNLDKPLLPGQVIGIIGGGHLAKMMALSAREMGFRVGVLDPQIDCPAAQVADWQLLGAYN DPEALEKLAKRAQVITYEFEHADVDALTAIQHLANIPQGTDILAITQDRLMEKSFLEDNN IVIAPYATIVSPTDIQEAIDGIGYPCILKNTRGEGRYVLHSTSDLAPSMNLLREGTCVLE AWIPYEKELSVLISGNGRGEFATFPVVETIKKERKLHETIAPARIDDEVSGELQRIAKVI AKAVGLVGTLSIEMFYTETGGIYVNKILPRPEDAGNFSIDACSFSQYDTHIRGLCNWPMP TIQLLSEAVTVNVLGNEAYETMDIINEHPDWHFHYYGHSEAKAQRAMGHITILTKEIDET LEEIKETKIWS >gi|237663595|gb|GG668923.1| GENE 533 490936 - 492231 1699 431 aa, chain + ## HITS:1 COG:SPy0036 KEGG:ns NR:ns ## COG: SPy0036 COG0015 # Protein_GI_number: 15674278 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Streptococcus pyogenes M1 GAS # 1 430 1 430 430 714 81.0 0 MIDRYTRPEMGAIWTDKNRYKAWLEVEILADEAWAELGEIPKEDVQKIRENASFDVARIL EIEAETRHDVVAFTRAVSETLGEERKWVHYGLTSTDVVDTAYGYLLKQANDILRKDLQTF TEIVGAKAKEYKHTVMMGRTHGVHAEPTTFGLKLALWYSEMKRNIERFEHAAKGVEAGKI SGAVGTFANISPFVEEYVCEHLGIRAQEISTQVLPRDLHAEYVSAMALIATSIEKFATEI RGLQKSETREVEEFFAKGQKGSSAMPHKRNPIGSENMTGLARVIRGHVITAFENVSLWHE RDISHSSAERIIIPDTTILLNYMLNRFGNIVKNLTVFPENMKRNMDATYGLIYSQRVLLK LIDHGMTREEAYDLVQPKTAYAWDHQTAFRPLLDADEKITSVLSKEELDDAFDYHYHLKN VDTIFERVGLG Prediction of potential genes in microbial genomes Time: Tue Jul 5 12:36:17 2011 Seq name: gi|237663594|gb|GG668924.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD3, whole genome shotgun sequence Length of sequence - 388414 bp Number of predicted genes - 405, with homology - 376 Number of transcription units - 218, operones - 103 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 83 68 ## 2 1 Op 2 . + CDS 111 - 968 826 ## EF_B0012 surface protein PrgC 3 1 Op 3 . + CDS 1019 - 1909 781 ## EF_B0013 hypothetical protein 4 1 Op 4 . + CDS 1929 - 2363 501 ## EF_B0014 hypothetical protein 5 1 Op 5 . + CDS 2410 - 2637 347 ## EF_B0015 hypothetical protein 6 1 Op 6 . + CDS 2650 - 2946 327 ## EF_B0016 hypothetical protein 7 1 Op 7 . + CDS 2961 - 3761 834 ## EF_B0017 hypothetical protein 8 1 Op 8 . + CDS 3763 - 4104 370 ## EF_B0018 hypothetical protein 9 1 Op 9 . + CDS 4070 - 6448 2403 ## COG3451 Type IV secretory pathway, VirB4 components 10 1 Op 10 . + CDS 6460 - 9075 2081 ## COG3942 Surface antigen 11 1 Op 11 . + CDS 9099 - 9704 502 ## EF_B0021 hypothetical protein 12 1 Op 12 . + CDS 9691 - 9936 381 ## EF_B0022 hypothetical protein 13 1 Op 13 . + CDS 9920 - 10528 685 ## EF_B0023 hypothetical protein + Prom 10560 - 10619 6.2 14 2 Tu 1 . + CDS 10642 - 11394 796 ## LSL_2159 hypothetical protein + Term 11395 - 11451 16.1 + Prom 11397 - 11456 2.4 15 3 Op 1 . + CDS 11508 - 12071 355 ## gi|227517420|ref|ZP_03947469.1| hypothetical protein HMPREF0348_0403 16 3 Op 2 . + CDS 12096 - 13193 621 ## lmo0310 hypothetical protein 17 3 Op 3 . + CDS 13198 - 13656 410 ## COG0629 Single-stranded DNA-binding protein 18 3 Op 4 . + CDS 13702 - 13887 245 ## gi|227517423|ref|ZP_03947472.1| hypothetical protein HMPREF0348_0406 19 3 Op 5 . + CDS 13929 - 14414 525 ## EF_B0024 hypothetical protein 20 3 Op 6 . + CDS 14414 - 16243 1395 ## COG3505 Type IV secretory pathway, VirD4 components 21 3 Op 7 . + CDS 16293 - 18452 1666 ## EF_B0026 hypothetical protein 22 3 Op 8 . + CDS 18485 - 18757 383 ## EF_B0027 LtrD-related protein, putative + Prom 18855 - 18914 2.8 23 4 Op 1 . + CDS 19003 - 19359 186 ## EF_B0029 hypothetical protein 24 4 Op 2 . + CDS 19360 - 21045 1175 ## COG3843 Type IV secretory pathway, VirD2 components (relaxase) 25 4 Op 3 . + CDS 21078 - 21428 305 ## EF_B0031 hypothetical protein + Prom 21891 - 21950 6.3 26 5 Tu 1 . + CDS 22039 - 22470 312 ## EF_B0047 hypothetical protein + Term 22566 - 22599 1.1 + Prom 22916 - 22975 5.8 27 6 Op 1 . + CDS 23015 - 23260 145 ## EF_B0048 Cro/CI family transcriptional regulator 28 6 Op 2 . + CDS 23276 - 24616 678 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 29 6 Op 3 . + CDS 24613 - 26715 484 ## COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 30 6 Op 4 . + CDS 26721 - 28265 417 ## EF_B0051 hypothetical protein 31 6 Op 5 . + CDS 28266 - 28670 353 ## COG0526 Thiol-disulfide isomerase and thioredoxins 32 6 Op 6 . + CDS 28678 - 29172 328 ## EF_B0055 putative lipoprotein 33 6 Op 7 . + CDS 29217 - 29441 301 ## EF_B0056 hypothetical protein + Prom 29480 - 29539 8.6 34 7 Tu 1 . + CDS 29649 - 29984 423 ## EF_B0057 hypothetical protein + Term 30007 - 30055 14.3 + Prom 30145 - 30204 4.9 35 8 Tu 1 . + CDS 30231 - 30773 397 ## gi|227554705|ref|ZP_03984752.1| hypothetical protein HMPREF0346_1868 + Term 30855 - 30893 -0.2 + Prom 30820 - 30879 2.5 36 9 Tu 1 . + CDS 30899 - 31015 80 ## gi|227554705|ref|ZP_03984752.1| hypothetical protein HMPREF0346_1868 + Prom 31095 - 31154 6.0 37 10 Op 1 . + CDS 31219 - 32418 587 ## Apar_0201 hypothetical protein + Prom 32427 - 32486 3.0 38 10 Op 2 . + CDS 32517 - 32600 56 ## 39 10 Op 3 . + CDS 32635 - 33822 520 ## BF2854 hypothetical protein + Prom 34051 - 34110 10.8 40 11 Op 1 . + CDS 34156 - 35277 922 ## gi|307283921|ref|ZP_07564093.1| LPXTG-motif protein cell wall anchor domain protein 41 11 Op 2 . + CDS 35612 - 35773 111 ## gi|307283921|ref|ZP_07564093.1| LPXTG-motif protein cell wall anchor domain protein + Term 35812 - 35863 11.1 42 12 Tu 1 . - CDS 35961 - 36830 808 ## LGAS_1061 XRE family transcriptional regulator - Prom 36884 - 36943 8.3 + Prom 36839 - 36898 5.7 43 13 Tu 1 . + CDS 36920 - 38158 305 ## PROTEIN SUPPORTED gi|148990506|ref|ZP_01821647.1| ribosomal protein L11 methyltransferase + Term 38305 - 38370 3.0 - Term 38295 - 38355 -0.6 44 14 Tu 1 . - CDS 38381 - 39199 726 ## COG1737 Transcriptional regulators - Prom 39223 - 39282 8.7 + Prom 39171 - 39230 11.0 45 15 Op 1 3/0.091 + CDS 39356 - 40063 797 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 46 15 Op 2 3/0.091 + CDS 40056 - 41558 1596 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 47 15 Op 3 . + CDS 41569 - 42051 395 ## COG2190 Phosphotransferase system IIA components + Term 42147 - 42189 6.0 + Prom 42467 - 42526 3.9 48 16 Tu 1 . + CDS 42548 - 42634 61 ## + Term 42680 - 42715 -0.7 - Term 42566 - 42609 -0.5 49 17 Op 1 3/0.091 - CDS 42684 - 43448 426 ## COG5438 Predicted multitransmembrane protein 50 17 Op 2 . - CDS 43445 - 44488 241 ## COG5438 Predicted multitransmembrane protein - Prom 44584 - 44643 10.5 51 18 Op 1 . + CDS 44839 - 45012 298 ## PROTEIN SUPPORTED gi|29375162|ref|NP_814315.1| 50S ribosomal protein L32 52 18 Op 2 . + CDS 45025 - 45411 372 ## EF0545 hypothetical protein + Prom 45505 - 45564 9.9 53 19 Tu 1 . + CDS 45600 - 45866 203 ## COG5341 Uncharacterized protein conserved in bacteria + Term 45869 - 45910 7.6 + Prom 46009 - 46068 6.8 54 20 Op 1 . + CDS 46096 - 47130 362 ## COG0004 Ammonia permease 55 20 Op 2 . + CDS 47102 - 47182 90 ## 56 20 Op 3 . + CDS 47233 - 48366 903 ## COG0492 Thioredoxin reductase 57 21 Tu 1 . - CDS 48321 - 48461 104 ## - Term 48587 - 48623 -0.7 58 22 Tu 1 . - CDS 48843 - 48932 106 ## - Prom 48959 - 49018 10.3 59 23 Op 1 11/0.000 - CDS 49189 - 49500 77 ## COG2801 Transposase and inactivated derivatives - Prom 49521 - 49580 4.5 60 23 Op 2 . - CDS 49606 - 49881 127 ## COG2801 Transposase and inactivated derivatives - Prom 49917 - 49976 1.9 61 24 Tu 1 . - CDS 50017 - 50136 79 ## - Prom 50306 - 50365 9.5 - Term 50321 - 50369 4.3 62 25 Tu 1 . - CDS 50390 - 51343 770 ## COG1940 Transcriptional regulator/sugar kinase - Prom 51589 - 51648 10.4 + Prom 51707 - 51766 8.9 63 26 Op 1 . + CDS 51923 - 53989 1262 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases 64 26 Op 2 13/0.000 + CDS 53989 - 54774 844 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 65 26 Op 3 1/0.333 + CDS 54767 - 55579 702 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 66 26 Op 4 9/0.000 + CDS 55604 - 56086 391 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 67 26 Op 5 . + CDS 56098 - 56505 445 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA + Prom 56524 - 56583 7.1 68 27 Op 1 11/0.000 + CDS 56610 - 57917 1050 ## COG2115 Xylose isomerase + Term 57927 - 57967 6.8 69 27 Op 2 . + CDS 57979 - 59469 1102 ## COG1070 Sugar (pentulose and hexulose) kinases + Prom 59791 - 59850 8.4 70 28 Tu 1 . + CDS 59870 - 59977 73 ## + Term 60225 - 60277 4.6 + Prom 60002 - 60061 5.6 71 29 Tu 1 . + CDS 60301 - 60543 211 ## BLJ_1240 hypothetical protein - Term 60578 - 60628 -0.8 72 30 Tu 1 . - CDS 60648 - 61856 237 ## COG3547 Transposase and inactivated derivatives - Prom 62050 - 62109 4.6 73 31 Op 1 . + CDS 62146 - 63111 340 ## CD1118 hypothetical protein 74 31 Op 2 . + CDS 63133 - 63345 252 ## BLJ_1241 hypothetical protein 75 31 Op 3 . + CDS 63272 - 63577 205 ## 76 31 Op 4 . + CDS 63420 - 63896 85 ## BLJ_1242 hypothetical protein 77 32 Op 1 . + CDS 64955 - 65701 297 ## COG3505 Type IV secretory pathway, VirD4 components 78 32 Op 2 . + CDS 65778 - 65993 70 ## Closa_3718 conjugative transfer protein 79 32 Op 3 . + CDS 66085 - 66948 367 ## Ethha_1894 hypothetical protein + Prom 66980 - 67039 2.1 80 33 Tu 1 . + CDS 67159 - 67521 206 ## COG4725 Transcriptional activator, adenine-specific DNA methyltransferase + Term 67579 - 67629 -0.0 81 34 Tu 1 . - CDS 67797 - 68303 -57 ## 82 35 Tu 1 . + CDS 69186 - 70055 513 ## COG3451 Type IV secretory pathway, VirB4 components + Prom 70467 - 70526 4.9 83 36 Tu 1 . + CDS 70548 - 72338 76 ## COG3344 Retron-type reverse transcriptase + Term 72521 - 72573 4.4 84 37 Op 1 . + CDS 72754 - 74745 460 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 85 37 Op 2 . + CDS 74768 - 75019 154 ## gi|217388352|ref|YP_002333381.1| hypothetical protein pMG2200_20 86 37 Op 3 . + CDS 75009 - 76238 763 ## CD1107 hypothetical protein 87 38 Tu 1 . + CDS 77399 - 78316 144 ## COG0550 Topoisomerase IA + Term 78369 - 78408 6.1 + Prom 78382 - 78441 2.2 88 39 Op 1 . + CDS 78465 - 82385 1095 ## CD1105 putative DNA primase 89 39 Op 2 . + CDS 82386 - 83330 577 ## EF2322 hypothetical protein 90 39 Op 3 . + CDS 83334 - 83537 161 ## gi|227517489|ref|ZP_03947538.1| conserved hypothetical protein + Term 83547 - 83601 19.1 - Term 83794 - 83835 3.8 91 40 Tu 1 . - CDS 83837 - 84073 100 ## CD1103 hypothetical protein - Prom 84097 - 84156 3.2 92 41 Tu 1 . - CDS 84624 - 84809 61 ## gi|217388358|ref|YP_002333387.1| hypothetical protein pMG2200_26 - Prom 84833 - 84892 1.8 + Prom 84816 - 84875 1.7 93 42 Tu 1 . + CDS 85071 - 85922 202 ## gi|223983718|ref|ZP_03633890.1| hypothetical protein HOLDEFILI_01171 - Term 86439 - 86473 1.1 94 43 Tu 1 . - CDS 86500 - 86871 191 ## CDR20291_1747 hypothetical protein - Prom 86936 - 86995 4.6 + Prom 86923 - 86982 5.7 95 44 Tu 1 . + CDS 87016 - 87201 143 ## EUBREC_0767 hypothetical protein + Prom 87208 - 87267 4.0 96 45 Tu 1 . + CDS 87380 - 87526 170 ## gi|227517496|ref|ZP_03947545.1| hypothetical protein HMPREF0348_0479 + Prom 88065 - 88124 3.6 97 46 Op 1 40/0.000 + CDS 88144 - 88803 296 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 98 46 Op 2 1/0.333 + CDS 88806 - 90149 282 ## COG0642 Signal transduction histidine kinase + Term 90173 - 90210 2.3 + Prom 90909 - 90968 80.4 99 47 Op 1 . + CDS 90991 - 91482 289 ## COG1876 D-alanyl-D-alanine carboxypeptidase 100 47 Op 2 . + CDS 91490 - 91594 91 ## + Prom 91616 - 91675 2.4 101 48 Op 1 . + CDS 91713 - 92327 159 ## COG2720 Uncharacterized vancomycin resistance protein 102 48 Op 2 . + CDS 92324 - 93295 78 ## COG1052 Lactate dehydrogenase and related dehydrogenases 103 48 Op 3 . + CDS 93288 - 94322 435 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 104 48 Op 4 . + CDS 94328 - 94936 245 ## COG2173 D-alanyl-D-alanine dipeptidase + Term 94950 - 94989 1.4 + Prom 95298 - 95357 2.5 105 49 Tu 1 . + CDS 95528 - 95623 62 ## + Prom 95690 - 95749 2.0 106 50 Tu 1 . + CDS 95962 - 96195 102 ## LMHCC_1339 conjugative transposon protein + Prom 96403 - 96462 2.0 107 51 Op 1 . + CDS 96619 - 96819 196 ## Tresu_1933 Excisionase from transposon Tn916 + Term 96830 - 96886 -0.4 108 51 Op 2 . + CDS 96903 - 98096 3 ## COG0582 Integrase 109 52 Tu 1 . - CDS 98579 - 100162 794 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - Prom 100183 - 100242 9.8 + Prom 100497 - 100556 8.7 110 53 Tu 1 . + CDS 100609 - 100902 137 ## gi|227517512|ref|ZP_03947561.1| conserved hypothetical protein + Prom 101008 - 101067 9.8 111 54 Tu 1 . + CDS 101168 - 101422 91 ## gi|20385129|gb|AAM21178.1|AF329367_5 CylI + Prom 101968 - 102027 7.6 112 55 Op 1 . + CDS 102059 - 102169 136 ## gi|294779359|ref|ZP_06744761.1| conserved domain protein 113 55 Op 2 . + CDS 102203 - 102559 392 ## EF0562 hypothetical protein + Prom 102615 - 102674 4.0 114 56 Op 1 . + CDS 102706 - 102981 125 ## gi|315027536|gb|EFT39468.1| conserved domain protein 115 56 Op 2 . + CDS 103026 - 103319 244 ## EF0563 hypothetical protein 116 56 Op 3 . + CDS 103329 - 103481 87 ## EF0564 hypothetical protein + Prom 103486 - 103545 3.9 117 57 Tu 1 . + CDS 103648 - 103893 222 ## EF0566 hypothetical protein + Term 104056 - 104088 -1.0 + Prom 104185 - 104244 10.4 118 58 Op 1 . + CDS 104300 - 104380 208 ## 119 58 Op 2 20/0.000 + CDS 104377 - 106053 1304 ## COG2060 K+-transporting ATPase, A chain 120 58 Op 3 18/0.000 + CDS 106069 - 108099 1781 ## COG2216 High-affinity K+ transport system, ATPase chain B 121 58 Op 4 15/0.000 + CDS 108113 - 108643 475 ## COG2156 K+-transporting ATPase, c chain + Term 108654 - 108691 5.7 122 58 Op 5 16/0.000 + CDS 108712 - 111282 1985 ## COG2205 Osmosensitive K+ channel histidine kinase 123 58 Op 6 . + CDS 111294 - 111983 651 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 112191 - 112231 -0.6 124 59 Tu 1 . + CDS 112584 - 112646 68 ## + Prom 113256 - 113315 10.7 125 60 Tu 1 . + CDS 113465 - 113575 57 ## + Term 113623 - 113670 -0.5 + TRNA 113661 - 113734 85.7 # Met CAT 0 0 + TRNA 114417 - 114491 30.1 # Pseudo CCA 0 0 + Prom 114418 - 114477 79.1 126 61 Tu 1 . + CDS 114665 - 114784 71 ## + Term 114930 - 114967 1.1 127 62 Tu 1 . + CDS 115395 - 115475 64 ## + Prom 115480 - 115539 3.2 128 63 Tu 1 . + CDS 115585 - 115704 56 ## + Prom 116260 - 116319 5.1 129 64 Tu 1 . + CDS 116385 - 116645 174 ## EF0555 PTS system, IIA component + Term 116674 - 116729 1.0 + Prom 116882 - 116941 11.1 130 65 Tu 1 . + CDS 117117 - 117251 127 ## EF0573 hypothetical protein + Prom 117364 - 117423 80.4 131 66 Op 1 . + CDS 117631 - 117735 114 ## gi|227517530|ref|ZP_03947579.1| conserved hypothetical protein + Prom 117739 - 117798 6.9 132 66 Op 2 . + CDS 117916 - 118005 60 ## + Prom 118057 - 118116 6.0 133 67 Op 1 42/0.000 + CDS 118149 - 118868 200 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 134 67 Op 2 12/0.000 + CDS 118870 - 119712 721 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 135 67 Op 3 . + CDS 119709 - 120659 920 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 136 67 Op 4 . + CDS 120674 - 120907 172 ## EF0578 iron-dependent repressor family protein 137 67 Op 5 . + CDS 120936 - 121028 95 ## + Prom 121109 - 121168 7.1 138 68 Tu 1 . + CDS 121303 - 121821 314 ## EF0579 transcriptional regulator, putative + Term 121834 - 121870 -0.3 + Prom 121865 - 121924 4.9 139 69 Op 1 34/0.000 + CDS 121951 - 122619 248 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters + Term 122670 - 122709 4.5 + Prom 122642 - 122701 4.3 140 69 Op 2 . + CDS 122726 - 124045 789 ## COG1122 ABC-type cobalt transport system, ATPase component 141 69 Op 3 . + CDS 124063 - 124632 551 ## EF0582 hypothetical protein + Prom 124654 - 124713 1.6 142 70 Op 1 35/0.000 + CDS 124742 - 126496 214 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 143 70 Op 2 . + CDS 126450 - 128222 203 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein + Term 128338 - 128398 2.7 + Prom 128624 - 128683 6.6 144 71 Op 1 . + CDS 128745 - 129014 456 ## PROTEIN SUPPORTED gi|227517541|ref|ZP_03947590.1| 30S ribosomal protein S14 145 71 Op 2 . + CDS 129008 - 129208 337 ## PROTEIN SUPPORTED gi|227554644|ref|ZP_03984691.1| 50S ribosomal protein L32 146 71 Op 3 . + CDS 129240 - 129617 524 ## EF0587 hypothetical protein 147 71 Op 4 . + CDS 129638 - 129787 249 ## PROTEIN SUPPORTED gi|227517544|ref|ZP_03947593.1| 50S ribosomal protein L33 + Prom 130211 - 130270 7.0 148 72 Tu 1 . + CDS 130313 - 131863 1225 ## COG0726 Predicted xylanase/chitin deacetylase + Prom 132133 - 132192 11.2 149 73 Op 1 . + CDS 132228 - 133361 709 ## gi|315025625|gb|EFT37557.1| LPXTG-motif protein cell wall anchor domain protein 150 73 Op 2 . + CDS 133315 - 135660 1603 ## gi|227517548|ref|ZP_03947597.1| conserved hypothetical protein + Prom 136554 - 136613 80.4 151 74 Tu 1 . + CDS 136653 - 136811 167 ## gi|21693365|gb|AAM75312.1|AF454824_109 EF0109 + Term 136817 - 136864 1.2 + Prom 137254 - 137313 5.9 152 75 Op 1 . + CDS 137378 - 137467 112 ## + Term 137567 - 137607 0.3 + Prom 137505 - 137564 4.9 153 75 Op 2 . + CDS 137624 - 138019 209 ## EF0594 hypothetical protein + Term 138184 - 138243 9.4 154 76 Op 1 . + CDS 138357 - 138461 88 ## gi|312908097|ref|ZP_07767077.1| transposase, IS4 family 155 76 Op 2 2/0.212 + CDS 138480 - 138902 335 ## COG3666 Transposase and inactivated derivatives 156 77 Op 1 2/0.212 + CDS 139137 - 139667 331 ## COG3666 Transposase and inactivated derivatives 157 77 Op 2 . + CDS 139664 - 139876 105 ## COG3666 Transposase and inactivated derivatives + Prom 139940 - 139999 5.7 158 78 Tu 1 . + CDS 140115 - 140345 354 ## EF0599 hypothetical protein - Term 140247 - 140285 0.4 159 79 Op 1 . - CDS 140482 - 141105 310 ## EF0600 TetR family transcriptional regulator 160 79 Op 2 . - CDS 141113 - 141757 504 ## EF0601 TetR family transcriptional regulator - Prom 141782 - 141841 8.5 161 80 Tu 1 . - CDS 142276 - 142695 140 ## COG2801 Transposase and inactivated derivatives - Prom 142882 - 142941 2.6 162 81 Op 1 . - CDS 143264 - 143455 234 ## COG2963 Transposase and inactivated derivatives - Prom 143476 - 143535 7.2 163 81 Op 2 . - CDS 143714 - 144181 262 ## EF0603 hypothetical protein - Prom 144203 - 144262 10.5 - Term 144471 - 144523 10.3 164 82 Op 1 . - CDS 144561 - 145139 737 ## COG1302 Uncharacterized protein conserved in bacteria 165 82 Op 2 . - CDS 145194 - 145376 176 ## gi|227517565|ref|ZP_03947614.1| hypothetical protein HMPREF0348_0548 166 82 Op 3 . - CDS 145386 - 145946 279 ## EF0605 hypothetical protein - Term 146517 - 146561 -0.9 167 83 Tu 1 . - CDS 146664 - 147131 421 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) - Prom 147187 - 147246 11.2 168 84 Op 1 . - CDS 147266 - 147799 433 ## COG1475 Predicted transcriptional regulators 169 84 Op 2 . - CDS 147786 - 148211 217 ## EF0608 hypothetical protein 170 84 Op 3 . - CDS 148208 - 149479 545 ## COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase - Prom 149509 - 149568 5.0 171 85 Tu 1 . - CDS 149933 - 150004 96 ## - Prom 150058 - 150117 1.5 172 86 Tu 1 . - CDS 150123 - 150233 78 ## - Prom 150292 - 150351 6.7 - Term 150339 - 150391 1.5 173 87 Tu 1 . - CDS 150450 - 150671 111 ## EF0611 hypothetical protein - Prom 150704 - 150763 3.5 174 88 Tu 1 . - CDS 151944 - 152042 135 ## - Prom 152113 - 152172 10.1 + Prom 152258 - 152317 5.7 175 89 Tu 1 . + CDS 152352 - 152675 155 ## COG1943 Transposase and inactivated derivatives + Term 152767 - 152813 16.8 - Term 152762 - 152794 7.0 176 90 Op 1 . - CDS 152802 - 153782 1012 ## COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog 177 90 Op 2 . - CDS 153795 - 154673 670 ## EF0617 hypothetical protein 178 90 Op 3 . - CDS 154688 - 155488 731 ## COG1378 Predicted transcriptional regulators - Prom 155608 - 155667 11.1 - Term 155649 - 155695 3.3 179 91 Tu 1 . - CDS 155816 - 155911 90 ## - Prom 155938 - 155997 7.0 + Prom 156335 - 156394 3.6 180 92 Op 1 . + CDS 156472 - 156642 161 ## EF0621 hypothetical protein 181 92 Op 2 . + CDS 156701 - 156865 173 ## EF0622 hypothetical protein 182 92 Op 3 . + CDS 156846 - 157202 245 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 183 92 Op 4 . + CDS 157216 - 157536 318 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Term 157545 - 157610 10.1 + Prom 157571 - 157630 6.5 184 93 Tu 1 . + CDS 157666 - 157875 188 ## EF0624 hypothetical protein + Prom 157881 - 157940 2.8 185 94 Op 1 . + CDS 158086 - 158292 68 ## EF2268 hypothetical protein 186 94 Op 2 . + CDS 158355 - 158903 129 ## EF0625 hypothetical protein + Prom 159090 - 159149 6.8 187 95 Op 1 . + CDS 159271 - 159477 231 ## EF0627 hypothetical protein 188 95 Op 2 . + CDS 159521 - 159937 425 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA + Term 160145 - 160184 -1.0 + Prom 160778 - 160837 5.0 189 96 Op 1 . + CDS 160933 - 161772 1134 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 190 96 Op 2 . + CDS 161795 - 162277 599 ## EF0630 glyoxalase family protein + Term 162312 - 162356 9.1 + Prom 162305 - 162364 5.6 191 97 Tu 1 . + CDS 162443 - 163888 1190 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes + Term 163906 - 163946 7.1 + Prom 164503 - 164562 6.2 192 98 Tu 1 . + CDS 164586 - 165842 601 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Term 165945 - 165990 13.2 + Prom 165977 - 166036 9.2 193 99 Op 1 7/0.000 + CDS 166141 - 168003 2206 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins + Term 168132 - 168172 3.0 + Prom 168116 - 168175 3.4 194 99 Op 2 . + CDS 168202 - 169620 1655 ## COG0531 Amino acid transporters + Term 169683 - 169731 9.3 + Prom 169623 - 169682 3.3 195 100 Tu 1 . + CDS 169745 - 171151 1458 ## COG1757 Na+/H+ antiporter + Term 171181 - 171231 8.0 + Prom 171238 - 171297 4.9 196 101 Tu 1 . + CDS 171507 - 172424 1089 ## EF0637 hypothetical protein + Term 172435 - 172482 10.5 - Term 172417 - 172475 20.2 197 102 Op 1 . - CDS 172476 - 172925 553 ## COG4808 Uncharacterized protein conserved in bacteria - Prom 172985 - 173044 5.3 - Term 173015 - 173059 7.0 198 102 Op 2 . - CDS 173065 - 173571 733 ## COG1267 Phosphatidylglycerophosphatase A and related proteins - Prom 173636 - 173695 3.6 199 103 Tu 1 . - CDS 173703 - 174266 729 ## COG0039 Malate/lactate dehydrogenases 200 104 Tu 1 . - CDS 174588 - 174872 431 ## COG0039 Malate/lactate dehydrogenases - Prom 174962 - 175021 6.6 + Prom 174953 - 175012 6.5 201 105 Op 1 . + CDS 175040 - 175402 199 ## EF0642 hypothetical protein 202 105 Op 2 . + CDS 175418 - 175828 288 ## EF0643 hypothetical protein + Term 175833 - 175883 11.1 - Term 175820 - 175870 11.1 203 106 Tu 1 . - CDS 175875 - 176702 774 ## COG0583 Transcriptional regulator - Prom 176775 - 176834 7.4 + Prom 176735 - 176794 7.6 204 107 Op 1 . + CDS 176844 - 177413 518 ## COG1275 Tellurite resistance protein and related permeases 205 107 Op 2 . + CDS 177406 - 177813 357 ## COG1275 Tellurite resistance protein and related permeases 206 107 Op 3 . + CDS 177836 - 178801 816 ## COG0451 Nucleoside-diphosphate-sugar epimerases + Term 179001 - 179070 25.2 - Term 178781 - 178848 30.2 207 108 Tu 1 . - CDS 179042 - 179356 334 ## COG1733 Predicted transcriptional regulators - Prom 179423 - 179482 4.2 + Prom 179244 - 179303 5.8 208 109 Op 1 . + CDS 179486 - 180103 891 ## COG0778 Nitroreductase + Term 180142 - 180199 3.2 + Prom 180212 - 180271 2.3 209 109 Op 2 . + CDS 180291 - 181304 1107 ## COG0095 Lipoate-protein ligase A + Term 181305 - 181365 21.6 - Term 181297 - 181349 16.4 210 110 Op 1 . - CDS 181375 - 182223 843 ## COG0501 Zn-dependent protease with chaperone function - Prom 182281 - 182340 5.0 211 110 Op 2 . - CDS 182412 - 182738 412 ## EF0652 hypothetical protein - Prom 182765 - 182824 7.4 + Prom 182729 - 182788 10.0 212 111 Op 1 . + CDS 182869 - 183147 192 ## EF0653 hypothetical protein 213 111 Op 2 . + CDS 183152 - 184087 939 ## COG1609 Transcriptional regulators + Prom 184124 - 184183 5.5 214 112 Op 1 . + CDS 184258 - 184854 862 ## COG3560 Predicted oxidoreductase related to nitroreductase 215 112 Op 2 . + CDS 184897 - 185742 1173 ## COG2514 Predicted ring-cleavage extradiol dioxygenase + Term 185756 - 185797 4.3 + Prom 185777 - 185836 5.2 216 113 Op 1 . + CDS 185872 - 186633 922 ## COG1349 Transcriptional regulators of sugar metabolism 217 113 Op 2 . + CDS 186646 - 188046 1434 ## EF0658 hypothetical protein 218 113 Op 3 . + CDS 188134 - 188784 731 ## COG1573 Uracil-DNA glycosylase + Prom 188787 - 188846 4.1 219 114 Tu 1 . + CDS 188959 - 190299 1171 ## COG0534 Na+-driven multidrug efflux pump + Term 190390 - 190433 -0.2 - Term 190271 - 190315 9.1 220 115 Tu 1 . - CDS 190324 - 192132 2116 ## COG1164 Oligoendopeptidase F - Prom 192294 - 192353 8.2 + Prom 192121 - 192180 5.5 221 116 Tu 1 . + CDS 192278 - 192787 288 ## EF0662 hypothetical protein + Term 192792 - 192850 10.7 + Prom 192826 - 192885 2.7 222 117 Op 1 . + CDS 192917 - 193645 1027 ## COG0217 Uncharacterized conserved protein + Term 193653 - 193679 -0.6 223 117 Op 2 . + CDS 193698 - 194168 438 ## EF0664 hypothetical protein + Term 194183 - 194232 15.5 - Term 194161 - 194229 25.2 224 118 Op 1 . - CDS 194244 - 194417 316 ## EF0665 hypothetical protein - Prom 194444 - 194503 6.6 - Term 194486 - 194528 10.1 225 118 Op 2 . - CDS 194530 - 195504 1047 ## COG0346 Lactoylglutathione lyase and related lyases + Prom 195425 - 195484 4.8 226 119 Tu 1 . + CDS 195535 - 196107 654 ## COG0400 Predicted esterase + Term 196111 - 196159 9.3 - Term 196100 - 196144 5.1 227 120 Tu 1 . - CDS 196173 - 197699 1622 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase - Prom 197738 - 197797 6.7 + Prom 197815 - 197874 5.8 228 121 Tu 1 . + CDS 197903 - 199552 1600 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid + Term 199596 - 199644 6.4 + Prom 199574 - 199633 3.3 229 122 Tu 1 . + CDS 199661 - 200395 1007 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Prom 200439 - 200498 6.4 230 123 Op 1 . + CDS 200529 - 201944 2018 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 201946 - 201999 13.3 + Prom 201977 - 202036 4.2 231 123 Op 2 . + CDS 202088 - 202321 421 ## EF0672 hypothetical protein + Term 202538 - 202604 30.0 - Term 202415 - 202485 19.5 232 124 Tu 1 . - CDS 202604 - 203623 731 ## COG3594 Fucose 4-O-acetylase and related acetyltransferases - Prom 203851 - 203910 8.2 + Prom 203595 - 203654 3.6 233 125 Op 1 12/0.000 + CDS 203859 - 204812 1050 ## COG1125 ABC-type proline/glycine betaine transport systems, ATPase components 234 125 Op 2 . + CDS 204813 - 206330 1563 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) + Term 206334 - 206405 14.2 + Prom 206389 - 206448 6.4 235 126 Op 1 . + CDS 206472 - 206927 714 ## COG1438 Arginine repressor 236 126 Op 2 . + CDS 206961 - 208481 1462 ## COG1109 Phosphomannomutase 237 126 Op 3 . + CDS 208492 - 208821 191 ## PROTEIN SUPPORTED gi|116334854|ref|YP_796381.1| acetyltransferase + Term 208904 - 208951 15.3 - Term 208892 - 208939 15.3 238 127 Tu 1 . - CDS 208945 - 209808 535 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit - Prom 209922 - 209981 6.4 + Prom 209912 - 209971 8.7 239 128 Op 1 . + CDS 210151 - 212337 2545 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 240 128 Op 2 . + CDS 212400 - 212741 578 ## COG3679 Uncharacterized conserved protein + Term 212745 - 212795 18.1 - Term 212724 - 212788 24.8 241 129 Op 1 . - CDS 212810 - 213268 470 ## gi|227517644|ref|ZP_03947693.1| hypothetical protein HMPREF0348_0627 242 129 Op 2 . - CDS 213284 - 214846 967 ## COG1132 ABC-type multidrug transport system, ATPase and permease components - Prom 214871 - 214930 5.1 + Prom 214785 - 214844 10.2 243 130 Tu 1 . + CDS 215031 - 215120 256 ## + Prom 215178 - 215237 5.6 244 131 Op 1 . + CDS 215276 - 216508 624 ## COG0535 Predicted Fe-S oxidoreductases 245 131 Op 2 . + CDS 216501 - 216773 273 ## gi|227517647|ref|ZP_03947696.1| hypothetical protein HMPREF0348_0630 246 131 Op 3 . + CDS 216800 - 217270 197 ## gi|227517648|ref|ZP_03947697.1| hypothetical protein HMPREF0348_0631 + Term 217424 - 217461 0.7 + Prom 217301 - 217360 8.5 247 132 Op 1 5/0.030 + CDS 217544 - 218779 1232 ## COG0420 DNA repair exonuclease 248 132 Op 2 3/0.091 + CDS 218776 - 221487 2807 ## COG4717 Uncharacterized conserved protein 249 132 Op 3 . + CDS 221484 - 222428 1053 ## COG3481 Predicted HD-superfamily hydrolase + Term 222434 - 222471 7.1 - Term 222414 - 222466 16.2 250 133 Tu 1 . - CDS 222468 - 223496 1230 ## COG0760 Parvulin-like peptidyl-prolyl isomerase - Prom 223533 - 223592 8.4 251 134 Op 1 . - CDS 223660 - 224004 285 ## EF0686 hypothetical protein 252 134 Op 2 . - CDS 224005 - 224430 440 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - Prom 224532 - 224591 5.7 + Prom 224560 - 224619 5.3 253 135 Op 1 7/0.000 + CDS 224646 - 225383 262 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 254 135 Op 2 1/0.333 + CDS 225385 - 226596 902 ## COG4473 Predicted ABC-type exoprotein transport system, permease component + Prom 226618 - 226677 5.1 255 136 Op 1 5/0.030 + CDS 226725 - 227504 733 ## COG0510 Predicted choline kinase involved in LPS biosynthesis 256 136 Op 2 . + CDS 227577 - 228227 921 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase + Term 228353 - 228423 30.1 - Term 228209 - 228277 30.4 257 137 Tu 1 . - CDS 228426 - 229172 486 ## COG1737 Transcriptional regulators - Prom 229226 - 229285 11.7 + Prom 229233 - 229292 6.3 258 138 Op 1 19/0.000 + CDS 229351 - 230277 889 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 259 138 Op 2 7/0.000 + CDS 230282 - 231700 1740 ## COG1299 Phosphotransferase system, fructose-specific IIC component 260 138 Op 3 . + CDS 231727 - 232188 571 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 261 138 Op 4 . + CDS 232185 - 233162 1105 ## COG3684 Tagatose-1,6-bisphosphate aldolase + Prom 233164 - 233223 7.2 262 138 Op 5 . + CDS 233351 - 233884 417 ## COG3557 Uncharacterized domain/protein associated with RNAses G and E + Term 233908 - 233962 20.1 - Term 233894 - 233948 20.1 263 139 Tu 1 . - CDS 233972 - 234403 494 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 234433 - 234492 5.6 + Prom 234455 - 234514 6.8 264 140 Op 1 1/0.333 + CDS 234548 - 235693 1273 ## COG0628 Predicted permease + Prom 235789 - 235848 3.9 265 140 Op 2 . + CDS 235868 - 237247 1591 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 237254 - 237301 9.1 + Prom 237323 - 237382 6.3 266 141 Tu 1 . + CDS 237421 - 238995 1869 ## COG4108 Peptide chain release factor RF-3 + Term 239038 - 239092 16.1 + Prom 239081 - 239140 7.9 267 142 Op 1 . + CDS 239171 - 239614 457 ## EF0702 hypothetical protein 268 142 Op 2 . + CDS 239630 - 240277 660 ## COG2323 Predicted membrane protein + Prom 240283 - 240342 5.1 269 143 Tu 1 . + CDS 240383 - 241420 1024 ## EF0704 putative lipoprotein + Term 241426 - 241463 6.3 - Term 241414 - 241451 6.3 270 144 Tu 1 . - CDS 241458 - 241772 444 ## EF0705 hypothetical protein - Prom 241876 - 241935 11.1 - Term 241918 - 241959 4.2 271 145 Tu 1 . - CDS 241967 - 244207 1679 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 244257 - 244316 2.5 272 146 Tu 1 . - CDS 244333 - 244509 113 ## EF0707 hypothetical protein + Prom 244322 - 244381 6.2 273 147 Tu 1 . + CDS 244509 - 244700 383 ## EF0708 hypothetical protein + Prom 244784 - 244843 5.7 274 148 Op 1 25/0.000 + CDS 244871 - 245137 414 ## COG1925 Phosphotransferase system, HPr-related proteins 275 148 Op 2 . + CDS 245137 - 246864 2224 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 246877 - 246920 11.0 - Term 246869 - 246904 6.7 276 149 Tu 1 . - CDS 246909 - 247943 952 ## EF0711 hypothetical protein - Term 247967 - 248009 9.7 277 150 Op 1 . - CDS 248024 - 248761 720 ## EF0713 hypothetical protein 278 150 Op 2 . - CDS 248816 - 251029 1448 ## EF0714 hypothetical protein - Prom 251052 - 251111 5.3 + Prom 251376 - 251435 3.7 279 151 Tu 1 . + CDS 251455 - 252738 1983 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) + Term 252780 - 252822 9.2 + Prom 252771 - 252830 5.3 280 152 Tu 1 . + CDS 252850 - 253512 560 ## EF0716 hypothetical protein + Term 253520 - 253555 6.0 - Term 253501 - 253552 12.1 281 153 Op 1 19/0.000 - CDS 253656 - 255578 2384 ## COG1299 Phosphotransferase system, fructose-specific IIC component 282 153 Op 2 10/0.000 - CDS 255602 - 256519 988 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 283 153 Op 3 . - CDS 256516 - 257268 624 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 257341 - 257400 6.2 - Term 257362 - 257405 12.6 284 154 Tu 1 . - CDS 257407 - 258966 1497 ## COG0038 Chloride channel protein EriC - Prom 259043 - 259102 7.2 + Prom 259044 - 259103 6.3 285 155 Tu 1 5/0.030 + CDS 259131 - 261389 2265 ## COG0210 Superfamily I DNA and RNA helicases + Prom 261424 - 261483 7.2 286 156 Op 1 . + CDS 261515 - 263545 2273 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) + Prom 263547 - 263606 6.8 287 156 Op 2 . + CDS 263699 - 263809 191 ## + Term 263896 - 263934 5.0 + Prom 263885 - 263944 3.9 288 157 Op 1 31/0.000 + CDS 264127 - 264432 425 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 289 157 Op 2 21/0.000 + CDS 264432 - 265901 400 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 290 157 Op 3 2/0.212 + CDS 265901 - 267331 1797 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 291 157 Op 4 2/0.212 + CDS 267350 - 268438 1263 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase + Term 268448 - 268507 13.9 + Prom 268554 - 268613 5.6 292 158 Op 1 . + CDS 268638 - 270011 1621 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 293 158 Op 2 . + CDS 270012 - 270140 219 ## PROTEIN SUPPORTED gi|227517695|ref|ZP_03947744.1| 30S ribosomal protein S9 + Term 270158 - 270201 12.0 + Prom 270150 - 270209 3.8 294 159 Tu 1 . + CDS 270280 - 270597 407 ## EF0730 hypothetical protein + Term 270598 - 270651 9.3 - Term 270582 - 270639 2.3 295 160 Tu 1 . - CDS 270640 - 271605 625 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 271637 - 271696 6.6 + Prom 271586 - 271645 11.8 296 161 Op 1 3/0.091 + CDS 271884 - 272903 1215 ## COG0078 Ornithine carbamoyltransferase + Term 272912 - 272956 7.6 297 161 Op 2 . + CDS 272970 - 274346 1298 ## COG0531 Amino acid transporters 298 161 Op 3 1/0.333 + CDS 274339 - 275436 1009 ## COG2957 Peptidylarginine deiminase and related enzymes 299 161 Op 4 . + CDS 275448 - 276377 1120 ## COG0549 Carbamate kinase + Term 276442 - 276498 16.1 + Prom 276493 - 276552 6.5 300 162 Tu 1 . + CDS 276574 - 278160 1777 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases + Term 278207 - 278260 14.2 + Prom 278560 - 278619 11.3 301 163 Op 1 . + CDS 278718 - 279416 566 ## COG3201 Nicotinamide mononucleotide transporter 302 163 Op 2 . + CDS 279425 - 280069 833 ## COG1428 Deoxynucleoside kinases + Term 280077 - 280110 4.0 + Prom 280301 - 280360 7.0 303 164 Op 1 . + CDS 280419 - 280850 225 ## EF0741 hypothetical protein + Prom 280871 - 280930 5.4 304 164 Op 2 . + CDS 280963 - 281349 637 ## COG4835 Uncharacterized protein conserved in bacteria + Term 281354 - 281410 17.2 - Term 281346 - 281392 13.6 305 165 Tu 1 . - CDS 281396 - 281731 466 ## EF0743 hypothetical protein - Prom 281760 - 281819 7.9 - Term 281810 - 281853 5.1 306 166 Tu 1 . - CDS 281896 - 282045 122 ## - Prom 282160 - 282219 3.6 + Prom 281792 - 281851 4.0 307 167 Tu 1 . + CDS 282029 - 283420 1908 ## COG1823 Predicted Na+/dicarboxylate symporter + Term 283426 - 283486 13.6 + Prom 283465 - 283524 5.9 308 168 Tu 1 . + CDS 283555 - 283935 553 ## COG0346 Lactoylglutathione lyase and related lyases + Term 283941 - 283994 18.6 + Prom 283971 - 284030 7.1 309 169 Op 1 . + CDS 284089 - 285255 973 ## COG1680 Beta-lactamase class C and other penicillin binding proteins + Prom 285269 - 285328 4.6 310 169 Op 2 . + CDS 285354 - 286064 713 ## COG4420 Predicted membrane protein + Term 286071 - 286131 23.5 + Prom 286129 - 286188 9.3 311 170 Tu 1 . + CDS 286218 - 287168 1280 ## COG1054 Predicted sulfurtransferase + Term 287202 - 287270 31.2 + Prom 287190 - 287249 72.0 312 171 Op 1 . + CDS 287422 - 287760 338 ## EF0750 cell wall surface anchor family protein 313 171 Op 2 . + CDS 287760 - 288491 836 ## EF0751 hypothetical protein 314 171 Op 3 . + CDS 288508 - 289287 957 ## EF0752 hypothetical protein 315 171 Op 4 . + CDS 289307 - 291406 1926 ## EF0753 hypothetical protein 316 171 Op 5 . + CDS 291429 - 292169 903 ## EF0754 hypothetical protein 317 171 Op 6 . + CDS 292245 - 293339 998 ## EF0755 hypothetical protein + Prom 293440 - 293499 8.9 318 172 Op 1 . + CDS 293541 - 293990 286 ## EF0756 hypothetical protein 319 172 Op 2 . + CDS 293994 - 295442 918 ## EF0757 hypothetical protein + Prom 295447 - 295506 6.0 320 173 Op 1 . + CDS 295552 - 297456 2119 ## COG2217 Cation transport ATPase 321 173 Op 2 . + CDS 297492 - 298211 688 ## COG1285 Uncharacterized membrane protein + Term 298224 - 298264 8.6 - Term 298212 - 298252 8.6 322 174 Op 1 16/0.000 - CDS 298259 - 298996 296 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 323 174 Op 2 . - CDS 298998 - 301166 2612 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 301190 - 301249 5.3 + Prom 301234 - 301293 8.5 324 175 Op 1 7/0.000 + CDS 301445 - 303442 2172 ## COG0556 Helicase subunit of the DNA excision repair complex + Term 303454 - 303509 17.1 + Prom 303461 - 303520 2.0 325 175 Op 2 . + CDS 303560 - 306379 2925 ## COG0178 Excinuclease ATPase subunit + Term 306399 - 306441 8.0 + Prom 306454 - 306513 9.5 326 176 Tu 1 . + CDS 306551 - 307345 824 ## EF0764 hypothetical protein + Term 307380 - 307417 7.3 + Prom 307428 - 307487 6.1 327 177 Op 1 12/0.000 + CDS 307511 - 308398 1043 ## COG1660 Predicted P-loop-containing kinase 328 177 Op 2 12/0.000 + CDS 308398 - 309393 929 ## COG0391 Uncharacterized conserved protein 329 177 Op 3 . + CDS 309427 - 310362 1032 ## COG1481 Uncharacterized protein conserved in bacteria + Term 310376 - 310432 7.6 + Prom 310387 - 310446 3.2 330 178 Tu 1 . + CDS 310596 - 311519 1056 ## EF0769 hypothetical protein + Term 311529 - 311582 12.2 + Prom 311542 - 311601 9.6 331 179 Tu 1 . + CDS 311632 - 312150 582 ## COG1651 Protein-disulfide isomerase + Term 312377 - 312425 -0.8 - Term 312128 - 312197 31.4 332 180 Tu 1 . - CDS 312263 - 312865 839 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 312900 - 312959 7.6 + Prom 312973 - 313032 6.0 333 181 Tu 1 . + CDS 313062 - 313580 464 ## EF0773 hypothetical protein + Term 313586 - 313637 10.2 334 182 Tu 1 . - CDS 313601 - 314005 573 ## EF0774 hypothetical protein - Prom 314032 - 314091 6.2 + Prom 314216 - 314275 5.3 335 183 Tu 1 . + CDS 314470 - 316338 2226 ## EF0775 anchor protein, putative + Prom 317240 - 317299 80.3 336 184 Op 1 . + CDS 317481 - 317762 157 ## EF0775 anchor protein, putative 337 184 Op 2 . + CDS 317787 - 318170 371 ## EF0776 hypothetical protein + Term 318183 - 318231 9.2 + Prom 318235 - 318294 7.5 338 185 Op 1 . + CDS 318337 - 318846 431 ## EF0778 hypothetical protein 339 185 Op 2 . + CDS 318876 - 320663 1573 ## COG0584 Glycerophosphoryl diester phosphodiesterase 340 185 Op 3 . + CDS 320689 - 321096 426 ## EF0780 MutT/NUDIX family protein + Term 321218 - 321279 15.8 - Term 321213 - 321261 3.2 341 186 Tu 1 . - CDS 321285 - 322727 702 ## LC705_01848 transcriptional antiterminator - Prom 322800 - 322859 8.9 + Prom 322811 - 322870 8.3 342 187 Op 1 . + CDS 322890 - 324365 833 ## SDEG_1738 trans-acting positive regulator 343 187 Op 2 . + CDS 324362 - 325054 515 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 344 187 Op 3 . + CDS 325067 - 326095 687 ## LSA1819 cell surface protein precursor 345 187 Op 4 . + CDS 326143 - 326802 613 ## MPTP_0084 extracellular protein 346 187 Op 5 . + CDS 326900 - 329242 1829 ## LPST_C2826 extracellular protein + Prom 329273 - 329332 6.7 347 188 Tu 1 . + CDS 329448 - 329648 379 ## COG1278 Cold shock proteins + Term 329657 - 329697 7.5 - TRNA 330304 - 330375 57.5 # Arg CCG 0 0 348 189 Tu 1 . + CDS 330434 - 331765 1426 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog + Term 331767 - 331819 15.1 + Prom 331769 - 331828 7.8 349 190 Op 1 . + CDS 331966 - 333843 1724 ## COG1835 Predicted acyltransferases + Term 333847 - 333895 8.2 + Prom 333911 - 333970 8.2 350 190 Op 2 . + CDS 334058 - 335242 1757 ## COG0192 S-adenosylmethionine synthetase + Term 335248 - 335312 19.3 351 191 Tu 1 . - CDS 335226 - 335534 96 ## gi|315170884|gb|EFU14901.1| hypothetical protein HMPREF9518_01349 - Prom 335574 - 335633 5.9 + Prom 335290 - 335349 10.7 352 192 Op 1 . + CDS 335410 - 336876 1771 ## COG0477 Permeases of the major facilitator superfamily 353 192 Op 2 . + CDS 336915 - 337706 907 ## COG0627 Predicted esterase + Term 337742 - 337792 19.1 - Term 337725 - 337781 10.7 354 193 Tu 1 . - CDS 337787 - 338449 726 ## EF0787 TetR family transcriptional regulator - Prom 338580 - 338639 8.8 + Prom 338561 - 338620 2.8 355 194 Op 1 35/0.000 + CDS 338703 - 340418 197 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 356 194 Op 2 . + CDS 340418 - 342187 261 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 342292 - 342360 31.1 + Prom 342198 - 342257 80.3 357 195 Op 1 . + CDS 342385 - 342654 103 ## gi|293385215|ref|ZP_06631032.1| ABC transporter, permease protein 358 195 Op 2 1/0.333 + CDS 342717 - 343322 619 ## COG1309 Transcriptional regulator + Term 343373 - 343436 18.1 + Prom 343344 - 343403 8.0 359 196 Op 1 36/0.000 + CDS 343461 - 344540 1167 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 360 196 Op 2 . + CDS 344545 - 345213 261 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Term 345223 - 345284 20.3 - Term 345216 - 345269 18.1 361 197 Op 1 6/0.000 - CDS 345270 - 345833 630 ## COG0500 SAM-dependent methyltransferases 362 197 Op 2 1/0.333 - CDS 345833 - 346801 861 ## COG1242 Predicted Fe-S oxidoreductase 363 197 Op 3 . - CDS 346817 - 347467 578 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 347497 - 347556 7.7 - Term 347566 - 347615 5.1 364 198 Op 1 . - CDS 347635 - 348660 978 ## EF0797 hypothetical protein 365 198 Op 2 . - CDS 348660 - 349319 633 ## EF0798 hypothetical protein - Prom 349563 - 349622 6.6 + Prom 349513 - 349572 8.4 366 199 Tu 1 . + CDS 349635 - 350741 1186 ## COG1705 Muramidase (flagellum-specific) + Prom 350992 - 351051 80.4 367 200 Op 1 . + CDS 351072 - 351872 808 ## COG1388 FOG: LysM repeat + Term 352077 - 352123 4.0 + Prom 352167 - 352226 6.4 368 200 Op 2 . + CDS 352277 - 354385 2659 ## COG0495 Leucyl-tRNA synthetase + Term 354453 - 354522 30.7 + Prom 354387 - 354446 80.3 369 201 Tu 1 . + CDS 354528 - 354902 585 ## COG0495 Leucyl-tRNA synthetase + Term 354918 - 354975 11.3 - Term 354915 - 354954 3.6 370 202 Op 1 . - CDS 354958 - 355182 243 ## EF0802 hypothetical protein - Prom 355213 - 355272 3.7 371 202 Op 2 . - CDS 355279 - 355722 373 ## EF0803 hypothetical protein - Prom 355817 - 355876 7.8 - Term 355843 - 355890 10.5 372 203 Op 1 16/0.000 - CDS 355899 - 356729 806 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 373 203 Op 2 34/0.000 - CDS 356743 - 357378 390 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 374 203 Op 3 . - CDS 357391 - 358032 678 ## COG0765 ABC-type amino acid transport system, permease component - Prom 358133 - 358192 3.7 + Prom 358776 - 358835 4.5 375 204 Op 1 . + CDS 358866 - 360497 1933 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Prom 360499 - 360558 5.3 376 204 Op 2 . + CDS 360604 - 360852 326 ## COG2261 Predicted membrane protein + Term 360945 - 360994 12.6 + Prom 360945 - 361004 7.5 377 205 Op 1 . + CDS 361244 - 362968 1360 ## COG4289 Uncharacterized protein conserved in bacteria 378 205 Op 2 . + CDS 362972 - 363799 652 ## EF0811 hypothetical protein + Term 363922 - 363988 30.0 + Prom 363802 - 363861 80.3 379 206 Op 1 . + CDS 364073 - 365236 864 ## EF0812 glucuronyl hydrolase, putative 380 206 Op 2 . + CDS 365249 - 367027 1640 ## COG1874 Beta-galactosidase + Term 367033 - 367083 14.7 381 207 Tu 1 . - CDS 367052 - 367759 785 ## COG2188 Transcriptional regulators - Prom 367862 - 367921 9.9 + Prom 367707 - 367766 8.7 382 208 Op 1 13/0.000 + CDS 367987 - 368913 999 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 383 208 Op 2 13/0.000 + CDS 368962 - 369753 1195 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 384 208 Op 3 . + CDS 369746 - 370546 979 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Term 370577 - 370619 4.2 + Prom 370565 - 370624 2.2 385 209 Tu 1 . + CDS 370661 - 373675 2813 ## EF0818 polysaccharide lyase family protein 8 + Term 373686 - 373750 13.1 - Term 373679 - 373729 13.7 386 210 Tu 1 . - CDS 373744 - 374067 470 ## EF0819 hypothetical protein - Prom 374105 - 374164 8.0 - Term 374230 - 374280 17.8 387 211 Tu 1 . - CDS 374319 - 374927 1004 ## PROTEIN SUPPORTED gi|29375409|ref|NP_814563.1| 50S ribosomal protein L25/general stress protein Ctc - Prom 375153 - 375212 6.2 388 212 Op 1 . + CDS 375258 - 376040 660 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 389 212 Op 2 . + CDS 376037 - 376717 683 ## COG1011 Predicted hydrolase (HAD superfamily) + Term 376722 - 376759 6.6 - Term 376710 - 376747 6.6 390 213 Tu 1 . - CDS 376752 - 377207 437 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 377325 - 377384 6.5 + Prom 377164 - 377223 6.9 391 214 Op 1 . + CDS 377290 - 377385 67 ## 392 214 Op 2 . + CDS 377382 - 378011 796 ## COG0572 Uridine kinase + Term 378018 - 378070 7.3 + Prom 378095 - 378154 6.7 393 215 Tu 1 . + CDS 378180 - 378521 321 ## COG2337 Growth inhibitor + Term 378534 - 378570 4.3 + Prom 378544 - 378603 6.7 394 216 Tu 1 . + CDS 378623 - 379588 1051 ## COG0673 Predicted dehydrogenases and related proteins + Term 379810 - 379849 8.6 + Prom 379824 - 379883 3.7 395 217 Op 1 . + CDS 379958 - 380257 393 ## EF0828 hypothetical protein 396 217 Op 2 . + CDS 380254 - 381876 1190 ## COG3711 Transcriptional antiterminator 397 217 Op 3 . + CDS 381842 - 382165 491 ## EF0829 hypothetical protein 398 217 Op 4 . + CDS 382180 - 382536 564 ## EF0830 hypothetical protein 399 217 Op 5 . + CDS 382567 - 382923 387 ## EF0831 hypothetical protein 400 217 Op 6 . + CDS 382939 - 383718 1061 ## EF0832 hypothetical protein 401 217 Op 7 . + CDS 383738 - 384433 1075 ## EF0833 hypothetical protein + Prom 384462 - 384521 9.6 402 218 Op 1 . + CDS 384564 - 385877 1417 ## COG1455 Phosphotransferase system cellobiose-specific component IIC + Term 385887 - 385929 5.0 403 218 Op 2 . + CDS 385954 - 386202 128 ## EF0835 hypothetical protein 404 218 Op 3 . + CDS 386211 - 387299 1301 ## COG3589 Uncharacterized conserved protein 405 218 Op 4 . + CDS 387308 - 388412 1131 ## COG3964 Predicted amidohydrolase Predicted protein(s) >gi|237663594|gb|GG668924.1| GENE 1 3 - 83 68 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no NVPVFFIKTPINRGIFEEIFGETLKS >gi|237663594|gb|GG668924.1| GENE 2 111 - 968 826 285 aa, chain + ## HITS:1 COG:no KEGG:EF_B0012 NR:ns ## KEGG: EF_B0012 # Name: prgC # Def: surface protein PrgC # Organism: E.faecalis # Pathway: not_defined # 1 274 1 274 285 300 100.0 3e-80 MKKIILSSLFSAVLVFGGGSITAFADDLGPTDPATPPITEPTDSSEPTNPTEPVDPAEPP VIPTDPTEPSKPTEPTTPSEPEKPTEPTTPIDPGTPVEPTEPSEPTEPSQPTEPTTPSEP EKPVTPEQPKEPTQPVIPEKPAEPETPKTPEQPTKPIDVVVTPSGEIDKTNQSAGTQPSI PIETSNLAEVTHVPSETTPITTEAGEEIVAVDKGVPLTKTPEGLKPISSSYKVLPSGNVE VKASDGKMKVLPHTGEKFTLLFSVLGSFFVLISGFFFFKKNKKKA >gi|237663594|gb|GG668924.1| GENE 3 1019 - 1909 781 296 aa, chain + ## HITS:1 COG:no KEGG:EF_B0013 NR:ns ## KEGG: EF_B0013 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 296 4 299 299 478 98.0 1e-133 MFILFTTKQSHVLLNELGFNKKIDLVQGIEQLTKINADLKKSTDRILITYEIYYNVTDEK AFVRETMTLPVVEETVLQNMVQTVETNEEVRQEDLEAFLHLFKRNVSNKSKRIGRSTGSL KKKAEKQQKSTVFTTISRYSYFSVALLIFLAVGVFTGASFGSQSKPTSQNDSKLEERLTH LQEQVHEQPQVDVVARFFLSSLYSGEESDKATQKQVKKYVSEGVLKEIKGSKEQIRTLFL WESKKEGNQWLLTYVVTLKVAKEETEIRQMKVAMEKKNNNYQVTEIPEEKEFTINE >gi|237663594|gb|GG668924.1| GENE 4 1929 - 2363 501 144 aa, chain + ## HITS:1 COG:no KEGG:EF_B0014 NR:ns ## KEGG: EF_B0014 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 144 1 144 144 226 100.0 2e-58 MKYERPLKRESQIKEFELGTHAAVIEKVQKKRSQKGNDMFLLSLLGKSNEKGVYFLTFGN DYTEDNLRYILASIQDNGVEIPDVDFGYNRETFEFLKGKDVYIQVEEQEYKGKVKHAVTN FLTQDEFEESEEMEFSESNTEEDW >gi|237663594|gb|GG668924.1| GENE 5 2410 - 2637 347 75 aa, chain + ## HITS:1 COG:no KEGG:EF_B0015 NR:ns ## KEGG: EF_B0015 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 75 1 75 75 86 100.0 3e-16 MDIVTKIITLIGGIIGLVSAVSIMFGVKEIRSGMSNDDPRTLDKGIEKVVVGGAVILAIG GVVAYVITQVGAIRF >gi|237663594|gb|GG668924.1| GENE 6 2650 - 2946 327 98 aa, chain + ## HITS:1 COG:no KEGG:EF_B0016 NR:ns ## KEGG: EF_B0016 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 98 1 98 98 170 97.0 1e-41 MKLLVEMIVNGQTEWEVVEEENAPQAIIQSRGDFSFDENGELIVNDDEISYTGVFEVCET NLLDFTVKEAEIHRFYHKKLEKLGINPLTFENSQEIAN >gi|237663594|gb|GG668924.1| GENE 7 2961 - 3761 834 266 aa, chain + ## HITS:1 COG:no KEGG:EF_B0017 NR:ns ## KEGG: EF_B0017 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 266 1 266 266 384 88.0 1e-105 MNIPKGTTDQLFKSLAEYNPATNEAMSKIAKVLVPLGIAILGILFMIELSNTQKKFQSED GGLTIELLTNIALKYVIAYVCIMGSGYIIDGIVWFTIQAAKWINSIVTATGTSEAIPQVG KVSWWAKPIVGLFEVFAYLALWLSSVITKILIFLRGVQLYMIKALAPLFVAFFVHDELRS IAMGYMKQIMAYALQGALLVLLMGLIPILTANDYLSFASFDGGIWANASAFVLNIMTYCA LILKYVAVIILLVGSQGFAKRLVGAM >gi|237663594|gb|GG668924.1| GENE 8 3763 - 4104 370 113 aa, chain + ## HITS:1 COG:no KEGG:EF_B0018 NR:ns ## KEGG: EF_B0018 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 110 1 110 117 188 99.0 5e-47 MAISSEFYKDLSKVEKKIWGITVREFKAYVCFVFIGIFLLLEVFFLPDLLFMVCALVTSF ALGWYPVLLMMNKWKEVKRAFYLRFYYEERTFQAGKIRRYQKDEFVQKETDVI >gi|237663594|gb|GG668924.1| GENE 9 4070 - 6448 2403 792 aa, chain + ## HITS:1 COG:CAC2047 KEGG:ns NR:ns ## COG: CAC2047 COG3451 # Protein_GI_number: 15895317 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Clostridium acetobutylicum # 235 747 38 576 617 80 23.0 8e-15 MNLFKKKQTLSSNVEKVDKKVKKRVQQQANPTVQDSIFYTSQFEEGLMHIVEDEFSKCYK LGEVDYEIAVEEDQLNTVMGYAEGLNTLDKNSRYQLLVVNKREEESLMEDVLLAYQGDHL DNYRQEINEIITKQYEQDERNFKIEKYAIFTTKSSSMKQANKELEGIMQNFANRFEANQI KLEVTPMTGLERLSLFSYFLRHGQYFGTSYQDIAVSGLTSKAFIVPSKIKFPNNKAYFRL GENYAAVLTIQQYPKYLEDKLIKELCATGRELAISIYARPYDMMEARKAIQGTKTLNDVA IQKQQKQNFRSGVSEDAISGEAKEIQETTNALMDEIKNNGQKLFNGLFSVFLIAETEKEL LEAVESVKNVGATWQVVFDTVDNYKEEALNTILPIGKPYLDVEMSYMRDLTTTNIATQVP FTNVELQSSTGQFYGRNQLTKNMITIDRKKDLITPSGLIFGTSGSGKGMATKWEILSTRL KFPKDRFLIVDPESEYLPIGKELDAEILDISTGTKNHLNILGMVDKQLLDEEDQELDLVK EKSNLLSTMFESLLKSYTDVDAGLVDRVTLLTYERFENKETEPTLVDWFRILKEQTDEGA KELANKVETYCVGSQDIFAHQTNIDLTAPFIVFNTKKLDDRLKKFAMKVILDQLWKQVVS GQGKVTSRLYFDELQVNFTTEEEAEWFLNLWARIRKYGAVTTGITQNPTTLLDSKAGQKM IANSEFLILLRQKPIDSQRLVEILSLTPALKKYINDRAPQGTGLISAGGVVVPFENPIPK ETHLFEIMNTDA >gi|237663594|gb|GG668924.1| GENE 10 6460 - 9075 2081 871 aa, chain + ## HITS:1 COG:SA2437_2 KEGG:ns NR:ns ## COG: SA2437_2 COG3942 # Protein_GI_number: 15928230 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Staphylococcus aureus N315 # 761 865 6 109 117 94 46.0 6e-19 MVENKRTWKEKVHVETQVEERLRKNLTLKSREATKLQKKALKTTKKEFKLSKKNYKQSLK KHKLTLKTGKEPLSINHLLDKKKFVEQKKRKKAQKIAYKRTKKVDETRVVNQVKRETKEG LKREATQKVRTTLTQEDTLNEAMTLYEKTQQAKFNMRTALKTGKTVKNLSVKTAKDTYGL GNRLFNFSRGRGFQRTPKDFTLKKQLMKQLRNRAMRFKAAKEAKKAEQGIGLIRSFFNGQ KTLGKVAALILKNPISWVVLLVLFLVFLLSGVASSTQKPAIVQEEEDLTASWTYFTKLDA QHTDDNNQFYSNIDDVLFYMNYRYDDFKLLDMDSTGTKNFETILSDLWTALNGKKPDYQL KTMQSLETDKKSSYFIEEEQAKHYQEIKKELGYQTLDDLLSFPVKTDALIVNKRYGYDKS KEKLTLYQGIDVLIEANQPFHSPMNGQIVSVPDTETLVIEKEKVARLTIRGVNTLRLTKG MDVEEGTFLGNTKNSTVTFQYEKYKKETKDWFFVNPAFYFPRVTYTQTTLLGSADFSPEA SVEKRAQAVYDYLSKKGYTKEGISAILGNFSVESGINPKRAEGDYLNPPVGAHGNSWDEP SWLSMGGPQIYGGRFPNILHRGLGLGQWTDTADGGRRHTLLLDYAKGKNKKWYDLQLQLD FIFDGDAPGSRTAADNVARSKVAATIPELTTYFLTVWEGNPGDKLGERIQAAQNWFTFFS RSGTPIGGSGSEVFAQYKEKMQPLPTDRETKAGQGWPGNAYAPGNCTWYVFNRFAQLGKS IHPTMGNANQWVHNYRQTPGATLESTPKKGDAVIFTNGVAGSSTQYGHVAYVEHVNSDGS FVISEMNVSGEYSMNWRVLKKEAGEYFMRLN >gi|237663594|gb|GG668924.1| GENE 11 9099 - 9704 502 201 aa, chain + ## HITS:1 COG:no KEGG:EF_B0021 NR:ns ## KEGG: EF_B0021 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 201 1 208 208 281 95.0 9e-75 MYNMEKLSRYKKIGFIGGSLLLIVLIFLIGLSVGQRKQVKVEKKEELTTSTVKKFLIAYY TKKDLGENRNRYEPLVTSAMYNELVNVEKQPVNQAYKGYVVNQVLDTYKIYIDTENNEVI VDVTYKNTQRTKRNNDEGALKNQSNQEAMKLTFVKQGANFLVDKMAPVTLTNELQEEQNS YNTHVVTKEESIKESANSGEK >gi|237663594|gb|GG668924.1| GENE 12 9691 - 9936 381 81 aa, chain + ## HITS:1 COG:no KEGG:EF_B0022 NR:ns ## KEGG: EF_B0022 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 81 4 84 84 81 96.0 1e-14 MGKSKVSELEKKKDRVENELNKANERLDTLKQSIAKKENELKQIEAEIVSALLTENNLSF SELTALLSEKEAGGEASVYRE >gi|237663594|gb|GG668924.1| GENE 13 9920 - 10528 685 202 aa, chain + ## HITS:1 COG:no KEGG:EF_B0023 NR:ns ## KEGG: EF_B0023 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 202 1 202 202 291 97.0 8e-78 MFIGNKTTYRYELLYSKNIKGEAIDSTATLVRYVIGVNNDLIKKEEEGWLYVEKIKEGKQ EDQILYGKRIDLPILEDNPYFHDLLDPFDTKKVIPFVELLPSAVENQIKPEEKNKETQDI VELEKNNKTTITTEEKETTELKEQPDEMADKETQKKILEQKIQFKKDELATLTEEIATKQ EEINDLEQKLSTFSKKPEGLYL >gi|237663594|gb|GG668924.1| GENE 14 10642 - 11394 796 250 aa, chain + ## HITS:1 COG:no KEGG:LSL_2159 NR:ns ## KEGG: LSL_2159 # Name: not_defined # Def: hypothetical protein # Organism: L.salivarius # Pathway: not_defined # 6 193 8 207 256 84 34.0 4e-15 MNTKKLAELIYSVAQYDGYNTSILQTQKNLSTNKDEWQFTNETDRYIFEDLVKAIHYASQ QKKLTVDVFKGINAQMDSHKEGQPENPGKLREKVTIHVGDYVPPRTVTEKMVQRELDAVT ENSVEDGWALYARLAKLQAFDNGNKRTALISANLFIGSLTGESSTYLTIPTDFRRTQFDA NLMYYYMADDFDDHMPDVQYSLNEFVRFAKEYTEAQPKNKFEERLEEAKIQQTNQKKFKA NHLRNNGKTL >gi|237663594|gb|GG668924.1| GENE 15 11508 - 12071 355 187 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517420|ref|ZP_03947469.1| ## NR: gi|227517420|ref|ZP_03947469.1| hypothetical protein HMPREF0348_0403 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0403 [Enterococcus faecalis TX0104] # 1 187 1 187 187 318 100.0 1e-85 MNELKKQRVVQTEVYQATMREISYPFIFEKNIIEWYATNEQLINQFVVKQFAIFDREKAD ILEIGLDPLLKGSQFISAKSFIPDSYMYYNNLNKLLDHEVQIVIVQTSSLPAEYIIEVLS DIAATATKLRIIIFVTINTEPKILPILSFTQVKTQAILDVIGYRKNEQKNTILIEQVYDR LLFSLMI >gi|237663594|gb|GG668924.1| GENE 16 12096 - 13193 621 365 aa, chain + ## HITS:1 COG:no KEGG:lmo0310 NR:ns ## KEGG: lmo0310 # Name: not_defined # Def: hypothetical protein # Organism: L.monocytogenes # Pathway: not_defined # 1 359 16 355 358 91 28.0 6e-17 MVEKFYAYYYGNRINAYEALKKRNRSEIVTSPVEKAELFDSLEKNDRYPVKPVKARNNIG VPYFAYYSNYRPEGANVENNKNRETFAHSLFQDVFLNLSTFIIRDGKTCVEVKIDSVAVD RRVWKSKKHYFIVDVLYKLKETTPYSYYYKWNGFLALEVCVTTRVLKEKVDFLSAKGLQI CSFSVPKKIEKELKIYDNASDVTPVDEQIYNKKFNKYRFLFESKRYEAYSKLLGSVLTKP EWEEKYVQMKRYEEQEKEMLERIQNATNNLEKLKLLEQEERDKLLCLKKEKENIINEIKK FNKEKRNSESLLQEIKKLSEKNEQLEENQKVLVKKNEELTVEKQFPKKHPLKALWHSIIG NEGEN >gi|237663594|gb|GG668924.1| GENE 17 13198 - 13656 410 152 aa, chain + ## HITS:1 COG:SP1540 KEGG:ns NR:ns ## COG: SP1540 COG0629 # Protein_GI_number: 15901384 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Streptococcus pneumoniae TIGR4 # 1 152 1 156 156 170 58.0 7e-43 MINNVTLVGRLTKDPDLRYTQSGTAVGQFTLAVNRNFTNQQGDREADFINCVIWRKAAES FANYARKGTLIGLTGRIQTRNYDNQQGQRVYVTEIVVENFQLLESKEVNDQRRSSKPDQA TFDKQATEKPDPLDPFSKDVSPIDISDDDLPF >gi|237663594|gb|GG668924.1| GENE 18 13702 - 13887 245 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517423|ref|ZP_03947472.1| ## NR: gi|227517423|ref|ZP_03947472.1| hypothetical protein HMPREF0348_0406 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0406 [Enterococcus faecalis TX0104] # 1 61 1 61 61 92 100.0 1e-17 MKIVKQWYFWLAVIFAVLLYQQITSPRELTATRWLIIILVAINIPLQLFTAYQKSKETKK D >gi|237663594|gb|GG668924.1| GENE 19 13929 - 14414 525 161 aa, chain + ## HITS:1 COG:no KEGG:EF_B0024 NR:ns ## KEGG: EF_B0024 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 161 2 162 162 271 98.0 6e-72 MEQREIVHRYYVLGTSTLDKVLKVLLNLSSDGVLALKDKFLPLKGENNLYKLMNHEDPLT SAQLHEKVNLNKLKEQLEAQGLPFAFKETKEGTNFYFRVKDTELAKKALERVLTDIKKNP QMILRKPNTMTFDERLAYTAANKKYVGKIDQTKTITKGRKL >gi|237663594|gb|GG668924.1| GENE 20 14414 - 16243 1395 609 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 66 509 78 506 591 148 28.0 3e-35 MQTYKKELKPYLYLGIFLFVIGFGIGNFFWLLPGTDYFSKTNYLFTKDILTYIEQTFYRF FITPSLLGFSAGILGFLLGLLMYVRDNDRGIYRHGEEYGSARFATPAEMKKYEDPIPENN IIVSNHVKISLFNKRLPIKLQKNKNIAILGDSGAAKTLAFIKTNLMQRHASFITTDPDGG ILPEIGLLLKKGKYKIKVLDLNTLSNSDTFNVFEYMHSELDVDRVLEAVTEATKEGEKTT GEDFWIKAEGLLVRSLIAYLWFDGRRNEYTPHLGMIADMLRHLKRKDKNVPSPVEEWFEE LNEAIPDNYAYRQWTLFNNLYESETRASVLGIAAARYSVFDHEEVVNMIRTDTMDIDSWN EEKTAVFIAIPETNTSFNFIAALMFATVGEVLRNKSDQVRLGKRVLEEGKELLHVRFLID EFANIGRIPHFEKMLTTFRKREMSFTIVLQSLNQLQTLYRNGWQNILNGCACLLYLGGDE EETTKYLSARAGKQTLSIRKHSMNKGNQGGGSENRDKYGRDLIDRSEVALIGGDECLVFI SKEHVFKDKKFYAFQHDRADELATGPTDDKWYTWRRYMTDEEAILDKISATDIIDHGEIT SELKEETHV >gi|237663594|gb|GG668924.1| GENE 21 16293 - 18452 1666 719 aa, chain + ## HITS:1 COG:no KEGG:EF_B0026 NR:ns ## KEGG: EF_B0026 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 719 1 719 719 1297 98.0 0 MPMTHAQRQKVLEEIERKSIVDVSESLGITLVRQGQSYIWSEHDSFVLTPKKNAFYWNSR QVGGGSIKLVQVIKECTHAEALQYLQTVEAGAVETLKEPTPTNFHYYMKEHTQQNATIDY LLQERKLSRETIDFFFEQNLMAQSTYTDKETGQSEPVIVFKHVGLEEKIKGVALQGIWEN KKLHGERGRLKRVWGNGYYGLTVRVGYPPKIAEATSEKPIKIIVFEAPIDLMSYYELKKE TIGDAVLFCANGLKKGAVSTLIANEIGSYVKEEEKPTVLEQLEKSKLTTEKVQLVLAVDN DEAGKKFIQQFSNNWCPITLDQPKLIEGKSKTDWNDILKQTKNETKKKEAKLKRQEAKKR SRERNKEMSEKTQTKQKSQPEITLEEIIKKKDYKKLSQHLNDGIKEYLTSDTFKNYLDFA SKFHKYSSKNIRLLLAQNPNIRRVAGYNAWKKLDRQVKKGSKALYVYAPYFKDKVDKNGK KFTDENGEIVKETRYFLTPVFDVEQTTGAELPQLVYNLEENLSDGKIFTRTYNALVEICP VPVTVTSIASGANGYYDPTKKEIVLQQHLGEVMTLKVLLHEMTHAMLHPDSQAIFGDDVY SRQEFEAESVAYIVSRHLGLDTSSYSFGYLSSWTKQGEKLEEFTQSLETITKEARTLIEK ADHALSIEKGIQLPQNKFEERLLNAKKKETEVGKSQANEQKRQQNEPRISAQIANSTRF >gi|237663594|gb|GG668924.1| GENE 22 18485 - 18757 383 90 aa, chain + ## HITS:1 COG:no KEGG:EF_B0027 NR:ns ## KEGG: EF_B0027 # Name: not_defined # Def: LtrD-related protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 90 1 90 90 142 96.0 3e-33 MDQLTDESKFILTQFFLADPLSDQPRVHQKKKEKSKGTVLKELDTLIHDFKEKELKIDLF PYEEAATYLRKLKGNDSYLVFLDELLAPYQ >gi|237663594|gb|GG668924.1| GENE 23 19003 - 19359 186 118 aa, chain + ## HITS:1 COG:no KEGG:EF_B0029 NR:ns ## KEGG: EF_B0029 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 118 1 118 118 175 100.0 5e-43 MENKQKLKRPIQRKIRFSKEENELINRKIEESFFPNFQNFALHLLIQGEIRHVDYSELNR LTTEIHKIGININQMARLANQFHEISSEDIKDLTDKVQSLNALVQSELNKLIKRKEQS >gi|237663594|gb|GG668924.1| GENE 24 19360 - 21045 1175 561 aa, chain + ## HITS:1 COG:SP1056_1 KEGG:ns NR:ns ## COG: SP1056_1 COG3843 # Protein_GI_number: 15900926 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD2 components (relaxase) # Organism: Streptococcus pneumoniae TIGR4 # 1 285 1 251 402 136 34.0 1e-31 MVYTKHFVIHTFDKLNNACSYIENAEKTEVTNDNPSEHLEHLFQYIVNDDKTYMKKLVSG HGIVDPTNPYEEFKLTKLQAAIQRKIGYTFDPKSERLLPPTLTELEKGNAVLAHHLIQSF SPEDDLTPEKIHEIGYNTVMELTGGEYEFVIATHVDKEHLHNHIIFSSTNLKTGKAFRWQ KGTKKVFEQISDKIAAKEGAKIIEKSPKQTHTKYTKWQTESIYKQKIKSRLDFLLEQSSS INDFLEKAEALNLSADFSNKWTIYRLLDEPQIKNTRSRSLSKSDPTRYNYEKIIERLKEN KNVLTVEECVKRYEEKNEQEKNNFDYQFTIEPWQLSHKTERGYYINIDYGYGNSGKLFVG GYKVDPLDNGNYNIYIKRNEYFYFMSDKDATKSKYLIGASLIKQLRLYNGQTPLKREPVM QTIDELVSAINFLAANEIEDTRQLKLLEEKLEVAFLEAEKTLETLDEKMLELHQLSNLLL ENELQGDPELIQKKLKTLLPDATLAEFSYEDVRGEIEAIKTSQTLLESKLERTRNEINQL HEIQAVQEKEPEKQTDIKPKL >gi|237663594|gb|GG668924.1| GENE 25 21078 - 21428 305 116 aa, chain + ## HITS:1 COG:no KEGG:EF_B0031 NR:ns ## KEGG: EF_B0031 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 8 116 1 109 109 131 96.0 1e-29 MLVFKRILSVMLFLPFFILHLLFRYIGILTLLTSGFTTTLLLIIARVLAFLFLIIPIVIL ATEELRIEWASWVGWLLFGLLVLLFHYLAALNEELGGWFLDFSDWLRKVPSKLWAE >gi|237663594|gb|GG668924.1| GENE 26 22039 - 22470 312 143 aa, chain + ## HITS:1 COG:no KEGG:EF_B0047 NR:ns ## KEGG: EF_B0047 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 2 143 345 486 486 267 97.0 9e-71 MLGYVSKTAVCLFCVYLLSFTFVYASALSHQKESFERQSMILADDLKDLVNRDTVAVHST SLFKNSPVFVNSSKNYPILKELVPPNEALYWPNQFLFRTYTGLNVNMEIFDINALSKEES ELMKSNYYHDIYVKDSEVFVYVK >gi|237663594|gb|GG668924.1| GENE 27 23015 - 23260 145 81 aa, chain + ## HITS:1 COG:no KEGG:EF_B0048 NR:ns ## KEGG: EF_B0048 # Name: not_defined # Def: Cro/CI family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 81 1 81 81 139 100.0 4e-32 MESRLLFLRIKNNYTQSFVSNYIHCSQSAYSRYESGATMVPVDILVKLSLLYSTSVDYIL CLTDNPECYTKLNCITISNRK >gi|237663594|gb|GG668924.1| GENE 28 23276 - 24616 678 446 aa, chain + ## HITS:1 COG:CAC3308_1 KEGG:ns NR:ns ## COG: CAC3308_1 COG0463 # Protein_GI_number: 15896551 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 69 258 4 193 194 103 36.0 8e-22 MYSENFIANDWFNVEVFNKNKYTLTNQENKDVTELWLQILKGLKFPNELKETVSYSKNLK ELSLKTHAEVSVCIIAKNEQDSIRKCINSIYEFSDEIIFIDTGSIDSTKKIVKEIASEKV KIFDYTWQDDFSDARNYSIQKASKEWILIIDADEYVSSDELIKLRLLIDMLDRFKFKDSL RVSCAIYQLDNVITHGQSRLFRNNNKIKYYGLIHEELRNNKGLDPIFNVESEITFFHDGY KEILRKEKCERNIRLLAKMLEKEPDNVRWAYLYCRDSFSINSNIDFEKILLPFLIKNMDE SISCENILLTNYTHLILFLITKKYIIDGKSSLASKCIEVLEKMLPNSSDVTFYKFLNKQH SLYEQQFEFLKEVIQFRKNNEYDQYSQIGCNLLHYDLLISGLLFDVKSYDYSYQYFLKLD LANYFSELEIPDEYKMLINKYRENES >gi|237663594|gb|GG668924.1| GENE 29 24613 - 26715 484 700 aa, chain + ## HITS:1 COG:CAP0073 KEGG:ns NR:ns ## COG: CAP0073 COG2274 # Protein_GI_number: 15004777 # Func_class: V Defense mechanisms # Function: ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain # Organism: Clostridium acetobutylicum # 7 654 10 650 731 196 27.0 2e-49 MIKRPHVMQDSIQDCGVACIEMICKFYNINIDRRYIQEETGYGMIGISLKAMEKFFSKVD ANPEIVNISKINRLNKENREMINNSLPAIVFLEEEEIINHFVVIWHIGKKRILVSDPTHT KKEWINNKQIEKRAISYLFVEKPKNIFLNRSPKKVRFYGKFIKRNLKIFSLVMFFSIIVS LLSTYLSFNLGKNINILEKNIPLQEKTFLIQSISIGFIVLALVQVVVSYFKNILVIKGTF AFETQLFKKYINKMLTIHPKYFQLNSSGEFVSRISDILQVSNDVMNFFISVLLNFCMYVF SIITLFYFSKVMAIYLVVISAVVILFFAYIYPKIYHFGYTISKSNTDFQKKLITFIDGLE EFRALNADKYFSEKVLDKINKFITNNKKLQFFGTNSNVFLSLFNTVGTVILIAIGSLLVL KNSINLGNLTVLISLSGIVVSSLNQFGSFQAQYESMQVASHRIESILINMENENVCGEII LDKKIESIRCKRVSIKKGDTLLLDTVNCEIYRGKNLSIRGENGSGKSTLIKSLVRLDDDY RGQILINNIDIKKINLDCLRSKLVFVEPNPKFLEGTIRDNLLLGHKVPNSIFNKLIRDFE INKILDDLPLGINFPGEAAIKCLSSGQKQKLALFRGILKRPDILLVDEGFSNMDKEYLDR ILPKFDSWGIKLIVIDHSNRVTKDIDYITMENYDIKNSWM >gi|237663594|gb|GG668924.1| GENE 30 26721 - 28265 417 514 aa, chain + ## HITS:1 COG:no KEGG:EF_B0051 NR:ns ## KEGG: EF_B0051 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 406 3 408 429 641 98.0 0 MLQKKANMLLESYVREIYSDKLYTLIHKLNKNLTSETLENDLRKVADKVIISDFDIDKNH GQGPILLWNSNKEELFLGVVELTRDGKVILDEKKRKVDLKTNIKKILLFRIKVIEICKKE SLITFFSVNNNSQTLKKNIQTSLNIILIFIALLALSTVLELLKKFVIDFNQTNYLAIAIL LIFALLSIVLILSIKICVKYKNIVSDGFYGIVISSLCISIFSIYSIAIIDYKTVLMVVLV GTFLLIKEIFSSVGRIYEDKKKSGKMLKAILFSVITSIFLFINSVLIIKGITTYSAVLTF IVFQMAILNIFFIVKSLIHLYKMYRIQSISPALTNMQPQLVSNYKRILDLNYVKVTGNNS SFKSINAKFIYNYLVNQTSGVYLSNDLNTEKYNFVINKGLKGEGIFFDKDIKDFVEKVGV SINDLDFKKTIFNQNISTSEKKLLILAISIMENTDYIILDQFLDDLDEKNFLSCLSLLKQ HYSTVIVFTYRKEEVDGYYEISIDDGDFYRRSEE >gi|237663594|gb|GG668924.1| GENE 31 28266 - 28670 353 134 aa, chain + ## HITS:1 COG:BS_yolI KEGG:ns NR:ns ## COG: BS_yolI COG0526 # Protein_GI_number: 16079205 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Bacillus subtilis # 1 129 1 129 137 61 32.0 4e-10 MKKMIGGLVVGLFVLIFFWQLYSLNKEEIEYKITDSESIENKISQNKDLNIYFFKKGCQP CNVQKKDLNKVIKDKNLLVYGVDIEEKNKESNLLLDQLNITQTPTVIIIKEGKVYKRLEG VSSYELLEESLIKE >gi|237663594|gb|GG668924.1| GENE 32 28678 - 29172 328 164 aa, chain + ## HITS:1 COG:no KEGG:EF_B0055 NR:ns ## KEGG: EF_B0055 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 164 1 164 164 299 99.0 2e-80 MNKKTVILLIIGFTAVSIGIACFLQFKDRTKELEVTVDPIALKINTITSNNLDGYLKKHK TAYVYFGRPDCSDCNEFDPNLIKSIDKYKVYDKLIYVNLIEVRKDKQLWEKFKQKYGIKY TPTLAKYEYDERKNKQKPKFIVQWTPENGTVLKDFDNFVSKIEK >gi|237663594|gb|GG668924.1| GENE 33 29217 - 29441 301 74 aa, chain + ## HITS:1 COG:no KEGG:EF_B0056 NR:ns ## KEGG: EF_B0056 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 74 1 74 74 138 100.0 8e-32 MLNKKLLENGVVNAVTIDELDAQFGGMSKRDCNLMKACCAGQAVTYAIHSLLNRLGGDSS DPAGCNDIVRKYCK >gi|237663594|gb|GG668924.1| GENE 34 29649 - 29984 423 111 aa, chain + ## HITS:1 COG:no KEGG:EF_B0057 NR:ns ## KEGG: EF_B0057 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 111 1 111 111 191 100.0 8e-48 MKSVVWIYTVNTDGVVIRSSGSGMMWISSKKFQDKLKKELLPEWNLSIISYDIAKNDIPD ADIIMYNEMDMAYLDEKIKNTGLPVSYIDLQTKNADSIKKKLEKFAENKIQ >gi|237663594|gb|GG668924.1| GENE 35 30231 - 30773 397 180 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227554705|ref|ZP_03984752.1| ## NR: gi|227554705|ref|ZP_03984752.1| hypothetical protein HMPREF0346_1868 [Enterococcus faecalis HH22] hypothetical protein HMPREF0346_1868 [Enterococcus faecalis HH22] hypothetical protein HMPREF9507_01461 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9506_00677 [Enterococcus faecalis TX0309A] # 1 175 1 175 261 334 100.0 2e-90 MEITFIYIGNPKVDLKESNLAEFYTVKKELANNDSITEAAKDIVKSYNKQKRDYLESQDK DRSVFLSFNPIEGQTLYTSYPDYYFNEKNEVIFLDLVGKANHNWTLKELKNMKLNGYVKN DISIVYISELNAIGAAFPVDHIIEELSKFIVSVLEPVFVELAIKGGRHIATKGKKDIFKE >gi|237663594|gb|GG668924.1| GENE 36 30899 - 31015 80 38 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227554705|ref|ZP_03984752.1| ## NR: gi|227554705|ref|ZP_03984752.1| hypothetical protein HMPREF0346_1868 [Enterococcus faecalis HH22] hypothetical protein HMPREF0346_1868 [Enterococcus faecalis HH22] hypothetical protein HMPREF9507_01461 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9506_00677 [Enterococcus faecalis TX0309A] # 1 38 224 261 261 77 100.0 5e-13 MSLLISLGYELKDNQYIPCYSEEAVQNRRRWEKKENLQ >gi|237663594|gb|GG668924.1| GENE 37 31219 - 32418 587 399 aa, chain + ## HITS:1 COG:no KEGG:Apar_0201 NR:ns ## KEGG: Apar_0201 # Name: not_defined # Def: hypothetical protein # Organism: A.parvulum # Pathway: not_defined # 4 396 75 449 460 139 29.0 2e-31 MDKKVVILGNGFDLSSGLKSKYSDFFSKRINKELESLLNRAFLHFKEELSPKSSYDTIFK VRESKDPYQTVSKINEYGVDKIYTDLLESELTFWDLILYMFDDGSNDLQWQDVERRMLEF LNTPEGAEDIPSLNQILSLIDGKSPDEANAKTLFCLHLACWLPVEGREDYASKYYDSKDV INYLYNELRFFEKYFSIYINSVVNESYKEKARKLLLSITKKSTLPEVDGLVFTFNYTNSF NTLNSKISIVNVHGTVKNDNIIFGIDQEKINPNKPIFRFTKTFRQMTETKLASTYEQEIL LPKNEVYEIAFFCHSLSELDYSYFQTIFDHYDLYASNISLTFYYKVYEGTTQEAMELDLA DKISKLLHNYSDSIDNSKKGKNLLHKLLLEKRLIIKEII >gi|237663594|gb|GG668924.1| GENE 38 32517 - 32600 56 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIIMYERILTFYSSCLLVILSIEFQKE >gi|237663594|gb|GG668924.1| GENE 39 32635 - 33822 520 395 aa, chain + ## HITS:1 COG:no KEGG:BF2854 NR:ns ## KEGG: BF2854 # Name: not_defined # Def: hypothetical protein # Organism: B.fragilis # Pathway: not_defined # 24 269 250 489 496 96 30.0 2e-18 MIHIESVSKFLSELQALGGNKEFFFRGENREFSKRSPSIYQKEQLVKNSDKYYSRLIAEN PSALRSNPFETLSNLQHYGARTRLLDITSNPLIALFFAVIEPNDEPGYVYVYESEDIKFD TNHTAIMKAAINFLPGDMVMNFIKEEDSEDQDENFLQKLNEKTNLREQLCNPESIRKDLK KAHIVISTKKTDRIIRQSGNFIMPAFEYEEDSVSKSIEDLSVIDKENQVPILFEIDSRKK QKILNELSSLGINEGSVYPDVEHQTKYLERFFGEQSSITQKFSESEDKKKFIIEHYENEN RIFGPKSFFVPDSMESNLSNEERLFLNGFHTTNSTFVKEEDNYFVGIRADYFVVEIGTTE NPIDKQDTIDTEFAVVTANHKGSRYVTVIRLDNRI >gi|237663594|gb|GG668924.1| GENE 40 34156 - 35277 922 373 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|307283921|ref|ZP_07564093.1| ## NR: gi|307283921|ref|ZP_07564093.1| LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis TX0860] LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis TX0860] # 1 371 28 403 622 694 98.0 0 MIKKILFGVVCIFAFGGMAITAFADDTLPIYGSRIWFDLNGNGIQDQNEPSAPAIHFDKL AFTNKDLTVGFDYPGNNHLNAGSTTTPINSATAVIEPKSAWVKQNLNKDWSEITDKAMET DDWTEYESVSKQFSDANPLMDNAEVPYRTGFGNLNLANWIAQNVPEDSSYINPSQLPKWL TITESNKASIVNSSQFSADGFYYFDNKAPLQTVSGYYNLDGTFTESNDTQNPYVHSYAIA NLGLIPHASIKLDMTTEQKISNPNKEITVTYTVKNDGTSDLENITLSDIDFPAFNLKSGE EKTFSVAQIPNQQGIINTTVQGDLNYYYDQVYLNPDTGETSTTPQKPMHLLTVTDDKQVT VTYPTTKQSTLAS >gi|237663594|gb|GG668924.1| GENE 41 35612 - 35773 111 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|307283921|ref|ZP_07564093.1| ## NR: gi|307283921|ref|ZP_07564093.1| LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis TX0860] LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis TX0860] # 1 53 570 622 622 101 100.0 2e-20 MDNTSTGKKIDKSLPRTGFNNNLVLNTLGSALLVVSFVGFTVVFVIKRLKQDK >gi|237663594|gb|GG668924.1| GENE 42 35961 - 36830 808 289 aa, chain - ## HITS:1 COG:no KEGG:LGAS_1061 NR:ns ## KEGG: LGAS_1061 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: L.gasseri # Pathway: not_defined # 3 277 2 267 272 103 28.0 9e-21 MNTIGKQLKIERKNRGLTQSEMCQPILSTSYYAKVEKGYHKIAAEDLLSILKQNKIDVID FFISLEKKGATDISYEQLIHLAWSEAHLKQDIPKLHRLKKSVDHNQVMSKKQKALLLALL DLSIAGLSDSLISMPPDTKQLLQNYLFTLPTWNKLKLSVYGNALRVYTIESNQLFINSIL KKELTSYTLSNRCIILTILLNFISICIESNQDKLASNYLEFINRETSFPENFFQKTLGHY FTLLLLARQNKQIPMEELTAIYKVLTLTGLSQYATELEIFFKNHTSIVN >gi|237663594|gb|GG668924.1| GENE 43 36920 - 38158 305 412 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148990506|ref|ZP_01821647.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae SP6-BS73] # 1 409 1 407 415 122 25 3e-26 MNVFRKNKIFRQLSLANVLSIAGDSLFYLALVTYASQLKQYSLIISIIALLETLPNLLES LSGYFSDQTKYRFQWLIVSGFIRGILYCFVGILFASSWQAWLIICVTISINFVSDCFGTF SNSLRIPIIRRICTNDELEEALGLTNSFGQIIRFIAQFLGAALLALVSYSGLAYLNAISF FLVSVIFLFIQKSMDTSSVATNEEDGARKQIERQSYWHSLKKAINQIRYQPKLFQMVFQV GIINGLLAAFLPLLQIIFVEKTKMIIGNYSFTVALTGAVLTLSLAMGSLFGVPLFKKVQL ATVVLCLNLFIIIFLISCFYENFVVILSGLAIIGFLVGVSTPKLSGWLMTSVDSQQLAIS VGLINSILVMMAPLVMSIFSLISSFHRIQALIIYLLLLSGGCLMLSYITNRK >gi|237663594|gb|GG668924.1| GENE 44 38381 - 39199 726 272 aa, chain - ## HITS:1 COG:L192289 KEGG:ns NR:ns ## COG: L192289 COG1737 # Protein_GI_number: 15673158 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 6 272 6 273 273 272 55.0 5e-73 MNYIYLINEHYPLLTKSERKVADFILNSGESIIYSTMNDIKTKANVGDATIIRFCQKLGF SGFSDLKIEIAKEDFSKKKEQPSSGKYHDEVAKSLIEVLQSTSCLINEEKLTKAIQLINQ ASSLYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLTDRDLVIIFSLSGK TKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEEFLNGGSLAGKISQLYIC DLLVHEYEQNNKINSLDLREKVLRSIIDKRIE >gi|237663594|gb|GG668924.1| GENE 45 39356 - 40063 797 235 aa, chain + ## HITS:1 COG:SPy0251 KEGG:ns NR:ns ## COG: SPy0251 COG3010 # Protein_GI_number: 15674432 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Streptococcus pyogenes M1 GAS # 3 228 7 232 234 309 69.0 4e-84 MNKAKFLEVISGGLIVSCQALPGEPFYTEEGGLMPYFALAAKNAGAVGIRANSVRDIKEI KEKVSLPIIGIIKRDYPPEEPFITATMREVDELVAIGVEVIALDCTLRKRHDGLSINTFI EKVKKKYPQQLLMADISTFEEGKNAYQAGVDFVGTTLSGYTKESKKQNGPDMKLIKQLVQ ENICVIAEGKIHTPEQARQIKKLGVAGIVVGGAITRPQEIAKRFVDALNKEEKDV >gi|237663594|gb|GG668924.1| GENE 46 40056 - 41558 1596 500 aa, chain + ## HITS:1 COG:SP1684_1 KEGG:ns NR:ns ## COG: SP1684_1 COG1263 # Protein_GI_number: 15901519 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pneumoniae TIGR4 # 1 419 1 419 422 480 59.0 1e-135 MFKKFSQLGRAFMLPIAILPVAGLLLGLGGALTNESAMNAYPILEQPWIHTVLSIMSYAG NAVFTNLALIFAIGIAVGLANGDKGTAGLAGGVSYLVYTATISGFLALFSAKDATLDTGV VGSIIIGGTVAFLHNRYRKIELPQFLGFFGGSRFIPIISSLAAIIIGSFFYLIWPPIQNG LAVVGEHIAQMGSLGTFLYGFLLRLTGAVGLHHTIYPLFWYTSLGGTESVAGVTVSGAQN IFFAQLADPNHTGLFTYGTRFFAGRFATMMFGLPAACYAMYRAIPKQNRKKNGGLYFSGG LTSFLTGITEPVEYMFLFVAPWLYIIHAFLDGLSFYFADILNIRVGNSFSGGLIDFLLFG VLQGNDKTNWLKLIPFGIAWAIVYFCVFTFFIKKFKVAIPGMGEELPTTAENKLNKKTSL NDEAQIIIKALGSKTNIESVEACATRLRVAVVDGRMVDKETIKQLGATAVFEVNGGIQAV FGGKADLLSQEINQILEIEN >gi|237663594|gb|GG668924.1| GENE 47 41569 - 42051 395 160 aa, chain + ## HITS:1 COG:SP0758_3 KEGG:ns NR:ns ## COG: SP0758_3 COG2190 # Protein_GI_number: 15900652 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Streptococcus pneumoniae TIGR4 # 21 144 11 134 151 121 44.0 7e-28 MFNLFKNKKQEGISITAPCSGRIIPISEVNDPIFSKKVLGEGFAVVPEGNKIYAPLTGRI EAVFPTKHAISIKSDADIEYLIHIGIDTVELEGKPFSIFVNAGEKVTTETLLAEVDFDQI KQAGKDPSVIVVFTKPEQVNEVILNSYTTIYGDSCGKIIL >gi|237663594|gb|GG668924.1| GENE 48 42548 - 42634 61 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDLIISITNKSKQNLAAILFNISERLIV >gi|237663594|gb|GG668924.1| GENE 49 42684 - 43448 426 254 aa, chain - ## HITS:1 COG:SA0427 KEGG:ns NR:ns ## COG: SA0427 COG5438 # Protein_GI_number: 15926146 # Func_class: S Function unknown # Function: Predicted multitransmembrane protein # Organism: Staphylococcus aureus N315 # 30 248 30 248 260 91 32.0 2e-18 MNVISLLVIIFIFISIIIFKNNSFYFISGLFLNIVIFIGYLIAISLHISVYLVTFVSFLL MTIVILYWINGRNAKTKLAFICVIFFLVTFTIVSLPLITALKTQGFSSEELIELANFDLN VDIPFSELNVSIILISFSGAVIDGSMAICSSTYEIYTKNPELTFKELFNSSFNVVIEVLN STIYTLLFAFIASNFALVIYLQDLNYSFLELINSKIFVGELLVSILTGCAGILILPLSCL LGSWILKKRFHTLY >gi|237663594|gb|GG668924.1| GENE 50 43445 - 44488 241 347 aa, chain - ## HITS:1 COG:SA0428 KEGG:ns NR:ns ## COG: SA0428 COG5438 # Protein_GI_number: 15926147 # Func_class: S Function unknown # Function: Predicted multitransmembrane protein # Organism: Staphylococcus aureus N315 # 8 342 14 367 370 155 30.0 9e-38 MKKFKFTLFSLLVIIFSGLLIQRFSGYFYTTPVGIVKSVKIIDSEQLLTVKLVNNTKKTV VVKVKFNGNESTNPVFNKNNQILLDNSTKKWEFISLKRDGYTFILVVSFVSLVLGIAGKK GFFSLVGILFNIIFLFFLLWINQRNRSINLLLLISIYTIIAIIISTGTLYGLKKIDLRKV LATIFSVFLSYFITTITMKLLNDQGLRYEEMQFLTRPYRTVFLASLMLGGIGAALDNVVV IISSLDQLVRHTPEINTKELIESGKNIASDTTTSMINVLLFAYLSSATPFFIFYLANGWD FVETFKMHLSLEIMRFLCGGLAILFTIPSSFLFFLLFKKIKKEGENR >gi|237663594|gb|GG668924.1| GENE 51 44839 - 45012 298 57 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29375162|ref|NP_814315.1| 50S ribosomal protein L32 [Enterococcus faecalis V583] # 1 57 1 57 57 119 100 2e-25 MAVPARRTSKTKKRLRRTHEKLKSPEISFDENLGDYRKSHHVSLKGYYGGKKVMDKK >gi|237663594|gb|GG668924.1| GENE 52 45025 - 45411 372 128 aa, chain + ## HITS:1 COG:no KEGG:EF0545 NR:ns ## KEGG: EF0545 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 128 1 128 128 218 100.0 7e-56 MKKMNIIYPPLVEQSFQFYQDYEQERYDKSELYRIMVMKNIINENGTPTEEALKKGLVKD FYEEYDLSFEEFLKLYPFFNNYDPDYFQKIDGFWEVPVCLKEELILLLNDKDCAYDVRIQ IQQFLEER >gi|237663594|gb|GG668924.1| GENE 53 45600 - 45866 203 88 aa, chain + ## HITS:1 COG:lin0431 KEGG:ns NR:ns ## COG: lin0431 COG5341 # Protein_GI_number: 16799508 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 84 45 131 140 66 42.0 1e-11 MVKIDGKEIERINLDNPKEFIKTYYPSKGQYNTIEVKNGHVRVKKDNSPDQIAVKTGWIS EPGQTSICIPHRFILEIVQQYSKDYYIY >gi|237663594|gb|GG668924.1| GENE 54 46096 - 47130 362 344 aa, chain + ## HITS:1 COG:aq_112 KEGG:ns NR:ns ## COG: aq_112 COG0004 # Protein_GI_number: 15605698 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Aquifex aeolicus # 1 335 41 399 423 139 30.0 7e-33 MWLMIFGVILYYVGLVNHRYIHHTLILGLVTIISGTLCWLFVGYSLSFFGNIQYSIFYSP LASSEIVSILIQLLFCLYSVIMIIGSVLERGNWKYIVLFVPLWIVFVYAPVCFSLWGHGN WLGKIGVLDYSGGLVVHTTAGIGSLVLAITSPIRLKNSLIFKSQEMIAFVGMLFITLGWF GFNMAPSGKIGEESIQIWLNTLISILGGSISWPFTQWILIKKVSIYSIMNGIIGGLVGST CSVGYISPAISLLISVIVCTLCPIVIHIMHLRIANFDDAADSFGMNAVGGIAGSILTGVM AEKGDFFLQLFGTFLISIWSLSLSLLIHYLLKKIVNDCDSQCIR >gi|237663594|gb|GG668924.1| GENE 55 47102 - 47182 90 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIVILNVLDKKIKIIPSVYEYQNNSQ >gi|237663594|gb|GG668924.1| GENE 56 47233 - 48366 903 377 aa, chain + ## HITS:1 COG:SA2370 KEGG:ns NR:ns ## COG: SA2370 COG0492 # Protein_GI_number: 15928163 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin reductase # Organism: Staphylococcus aureus N315 # 22 377 22 368 368 291 44.0 1e-78 MENKEVIIIGAGAAGVGMGVALKDFGINNFSILERKQVGNSFIKWPEETRFITPSFTSNG FGMPDLNAIAIDTSPSYTLGKERLSGKDYAKYLQLVSEEYKLPIKTNCKVQSIKKEKTGY LLETTKGFIHAEYIIFAMGEFSFPNKSSVKGSYKNSLHYGEINSWIEIKGDQQTIIGGNE SAIDAALELAKLGKRVTIYTDTLGLNIRDADPSKRLSPRTRQRFFDLRVNQKKLDTIKIY TTIKVKKIDKTSTGYILITENGKSLPVENIPILCTGFENGIKSITASLFKYKENGQVLLN DFDESIIAKNIFLIGPNVRKGNTIFCYIYKFRQRFAVIANEIARRKHITIDEKKLSYYKN QSFYLDDCSGCEVRCSC >gi|237663594|gb|GG668924.1| GENE 57 48321 - 48461 104 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDNPMIKNSGLYDTIMVIITNSKGYSEVIPICQQLHLTSHPEQSSK >gi|237663594|gb|GG668924.1| GENE 58 48843 - 48932 106 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNILFLSICLFYIATILTGVYHWQNNKKK >gi|237663594|gb|GG668924.1| GENE 59 49189 - 49500 77 103 aa, chain - ## HITS:1 COG:RSc1436 KEGG:ns NR:ns ## COG: RSc1436 COG2801 # Protein_GI_number: 17546155 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 2 103 123 229 278 77 40.0 5e-15 MVTDITYLPFGKNQLYLSSIMDLYNGEFIAYTISDKQDTDFVLDTFDQLPQTTDCLLHSD QDSVYTSFNYQNQIKKGITMSRSRKGTPSDNACIESFHASLKS >gi|237663594|gb|GG668924.1| GENE 60 49606 - 49881 127 91 aa, chain - ## HITS:1 COG:SA0063 KEGG:ns NR:ns ## COG: SA0063 COG2801 # Protein_GI_number: 15925770 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Staphylococcus aureus N315 # 1 91 1 91 117 62 39.0 1e-10 MEPEVFVELVKRMKGKLPITALCQLFGISRATYYRWTHRKDLGKLTPLEEAVRRLCFQHK FRYGYRKITALINQEYKVNKNTVQKIMRKYH >gi|237663594|gb|GG668924.1| GENE 61 50017 - 50136 79 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKENIPVKTIMEELGIKNKTQIDTWWRWGIVMARIIIV >gi|237663594|gb|GG668924.1| GENE 62 50390 - 51343 770 317 aa, chain - ## HITS:1 COG:BH0700 KEGG:ns NR:ns ## COG: BH0700 COG1940 # Protein_GI_number: 15613263 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Bacillus halodurans # 1 311 72 383 388 149 32.0 5e-36 MLTFNGSSSALVIAIDLGYNYIDGALASLDGKEIHRVQLIDTYVNKKNVQDLIHKVFNQL TSDCPHTHYGIVGMTIALQGQVLNNKIISTSYNDLAEINLVEMLNQEYNFPVFLQNEANL SALGEYTFSSDIENLASISLHSGIGVGLVKNGKLDVGNKGYAGQLGHTILFPNGRKCTCG NHGCLEKYCSTQVIYHEISKEKNLNKINSDVVSILYNNKESKVVKMIEQYAYYLSIGVNN AIMLYAPELVIFNSPLTKKIPDIINIIQRNLNNQFTKDVLVINSPIEWNPVISGAISLSI QKFLNIEQLKLGKLNKI >gi|237663594|gb|GG668924.1| GENE 63 51923 - 53989 1262 688 aa, chain + ## HITS:1 COG:BH2055 KEGG:ns NR:ns ## COG: BH2055 COG1501 # Protein_GI_number: 15614618 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Bacillus halodurans # 1 670 1 647 657 649 46.0 0 MIEVTPKSFSRTFDDELLIVEAWGENAVRVRSFVDMNFENRLNSLIGEPDALGTVIINQD ENKTELINGKIRVVLDHRDRLTFYNEKNEVLLKEFIRLRAVKHDDGSEDAGTIEITKDFN STLKLKSREYHSNLQGGFQVTTRFESESSEKIFGMGQYQQSYLDLKNTVLELAQRNSQVS IPFYVSSLGYGFLWNNPGIGEVSFAKNMTRWKMASTNYIDYVVIAGDTPKEILRNYSDLT GKVPKMPENLLGLWQSKLRYRSPNEVMDVVKKYYALGIKLSTIAIDYFHWPKQGEYRFDE EYWPQPEQFLRTLRDEYNVEPIISIWPTVQTDAMNFNEYLENGYLVKVNRGVRLTMQIQG NTIFVDMTNEKAREYVWNLIKKNYVNKGVKYFWLDVAEPGYSVYDFDNYRYKKGTDLQIG NLYPIDYLSMISEGLGNNQSVVTLVRGGWAGAQRYGALLWSGDIDSSFEAFRNQVNTGLN VGLAGLPWWTTDIGGFHGGDPKDPEFRELLVRWFQYATFSPILRMHGDRLPHSKPLSDHG GGSMVTGAPNEIWSYGKEVEQILTKYIKIREELKPYISKLMRQAHEFGDPLMRTLFYEYP HDQNAWNIEDTYLFGDAILVAPIENYKETSREVYLPKGESWTNLWTRENFDGGKTVVVEA DIQQIPIFIKTSEKGKFSKLFDVIKEEN >gi|237663594|gb|GG668924.1| GENE 64 53989 - 54774 844 261 aa, chain + ## HITS:1 COG:lin0022 KEGG:ns NR:ns ## COG: lin0022 COG3715 # Protein_GI_number: 16799101 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Listeria innocua # 1 246 1 246 267 184 41.0 1e-46 MEASIFQLVLIVLYGFFINFEKNSTMFGTYQPVTAGFVTGLILGDISTGLFIGGTLQLLS LGISNFGGASIPDYQTASIVATFITITTGQKPSVGISIGIPVALLMVQLDVIRNTIGIWM VHKAEAGVKKGDYSMITKMQMFGVFLTAATTGIPVALAVIFGPSLINTILSYTPEWLTNG LTVAGGLLPAVGIGLLLRYLPAKEYFSYLVIGFVMAVYMKIPLLGVALVGAAIALIIYKK NSQDLVKNTVINIAGGMDDDE >gi|237663594|gb|GG668924.1| GENE 65 54767 - 55579 702 270 aa, chain + ## HITS:1 COG:lin0023 KEGG:ns NR:ns ## COG: lin0023 COG3716 # Protein_GI_number: 16799102 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Listeria innocua # 21 269 26 274 275 195 44.0 1e-49 MNNIEQLKLRIDTKTKRSVLWRWFFTSSVSSNYEKMQALAYCYAVLPFLKIAYKNKPEAL QKAVLNHLQFFNTNPWVAPYILGINVAMEENADENTEEAVTSIKTGLMGPVAGLGDSLFV VIPWTIFGAIAANMAIDGSPVGILLWIVVSVALKLVSIPLFNAGYASGTKLIATIEKSLK LLTESTSILGLMVVGALIPSVVKANITLNFKQGNFSMKGQDILDQIMPGLLPALLVGLVF WALKKNVKPIYLILGVMVLSIVLAALGILK >gi|237663594|gb|GG668924.1| GENE 66 55604 - 56086 391 160 aa, chain + ## HITS:1 COG:lin0021 KEGG:ns NR:ns ## COG: lin0021 COG3444 # Protein_GI_number: 16799100 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Listeria innocua # 1 151 1 151 162 132 47.0 3e-31 MEMKGINNIRIDDRLIHGQVATMWSNKLGVTRLMVVNDNVAKNDLQKQVLRMAVPAGISS SIITEETAISNIKNGKYEGQNVLMIVKSPVDLLPFIENDLEIKRINVGNMSNRNNTTVLR PNISVTDEERSAFEKLLSLDIEITTIMTPDDKKTFLKDIL >gi|237663594|gb|GG668924.1| GENE 67 56098 - 56505 445 135 aa, chain + ## HITS:1 COG:YPO1758_1 KEGG:ns NR:ns ## COG: YPO1758_1 COG2893 # Protein_GI_number: 16122014 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Yersinia pestis # 1 121 1 121 162 72 30.0 2e-13 MTNEVILMSHGLMAKEILNSAQMILGDQINYPVVSMTPDDGIEGTFNKLDKIIGTLNDAK RIVILADLMGGTPANTAMMLASEDSRIQIITGVNLGMVLESFFAIKEENLVEHLLKIGTE SIKIPKLQIAEEEEE >gi|237663594|gb|GG668924.1| GENE 68 56610 - 57917 1050 435 aa, chain + ## HITS:1 COG:L0230 KEGG:ns NR:ns ## COG: L0230 COG2115 # Protein_GI_number: 15673491 # Func_class: G Carbohydrate transport and metabolism # Function: Xylose isomerase # Organism: Lactococcus lactis # 1 434 1 438 439 550 64.0 1e-156 MVYFPKIEKIKYEGTNTKNMYAFRHYNPEEIIMGKTMKEHLRFAVAYWHTMTQDGSDTFG KAVNKRSWLGESPMETAKKRVIAFFEILEKLDVEYFCFHDIDIAPEGNSLKEFFSNIDEI TDLIKEKMDETGIKLLWNTANMFSNPRYVNGAASTNNANVYAIAAAQVKKGLDVSKKLGG ENYVFWGGREGYETLLNTDMKFEQDNIARLFKMAIFYGEKIGHKPQFLIEPKPKEPSKHQ YDFDAATTMAFILKYGLEKDFKLNLEANHATLAGHTFEHELNVARNYGALGSIDANQGDV LLGWDTDEFPTNVYDVTLAMYEILENGGIEPGGINFDSKVRRSSFEMEDLLLAHIAGMDT FARGLKSAMKLKEDRFFEDLKEQRYSSFKKGIGAKIISGKENLESLTNYALKNDEPIIES SHIEYVKNILNDYLY >gi|237663594|gb|GG668924.1| GENE 69 57979 - 59469 1102 496 aa, chain + ## HITS:1 COG:L0231 KEGG:ns NR:ns ## COG: L0231 COG1070 # Protein_GI_number: 15673490 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Lactococcus lactis # 1 496 1 496 501 533 53.0 1e-151 MSYVLGIDLGTSSLKGLLVSEIGDVIATSSSDYPLFSSRPGYSEQNPHDWIKAIENVIND LLSEFPEMKKELKGISISGQMHSLVLLDKDNEIIRPAILWNDVRTTKQCEDIMNCMGREV QEITKNIALEGFTLPKILWVQENEEKNWTKTRHIMLPKDYLVHWLTGCYSTDYSDAAGTL MLDVKKRVWSKTILDKFNIPKEYLPTLFESSAKVGNMRSSLINRFGLETKVEIFAGGADN ACAAIGAGIVNSEVAMLSIGTSGVFLSMEDDAENEYQGNLHLFNSALPNSYYSMGVTLAA GNSLKWFRDTFAKDVEFSDLLANIDEVIVGSEGLIFTPYIRGERTPYQDSQIRGSFIGID SRHSLKHFTRSVIEGITFSLKESKVIMEQRKNLKIKKIISVGGGTKNQQWLQIQADIFGL PITTLETEQGPSLGAAILAVIGCGMCANIDSCIKMFVKYKKVYQPIEKNVLLYNKFFQVY SKVYSTTKEICYQLQE >gi|237663594|gb|GG668924.1| GENE 70 59870 - 59977 73 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKKIIKVLVICVEISIGFTALGTILKKVTQLIIR >gi|237663594|gb|GG668924.1| GENE 71 60301 - 60543 211 80 aa, chain + ## HITS:1 COG:no KEGG:BLJ_1240 NR:ns ## KEGG: BLJ_1240 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 73 1 74 381 121 72.0 9e-27 MLFTSGPDRAFERLMQEKPGFDHYDGGGADAPEDCGTCRFYRPDWKYQFCQFAECPYQPG KLTDYAAVKFTVKDLLIKVK >gi|237663594|gb|GG668924.1| GENE 72 60648 - 61856 237 402 aa, chain - ## HITS:1 COG:FN1676 KEGG:ns NR:ns ## COG: FN1676 COG3547 # Protein_GI_number: 19704997 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 1 393 1 380 391 87 23.0 5e-17 MNCVGIDVSKGKSMIAVMRPFGEVVVSPFEVRHTANELSELAGLLKSLDGETRVVMESTG NYHAPVAWLLHDAGLYVSVVNAMLVHDYGNNSLRRAKTDKKDAVKLANYGLDHWLTLPRY IPEEDTRLMLKICYRQYQQYSKVQTMLKNNLISLLDTTFPDANRLFTSPPRADGSEKWVD FVATFWHCECVCGRSEKAFTTQYQKWCRKHGYNFSEDKALDIYASACRHFGVIPKTDTAK LLVEQAISQLQTTSSALAALKQEMQSLAASLPEYPVVMGMFGVGPTLGPQLLAEIGDVRR FHSKKALVAFAGIDAPPYQSGQIDVRSRSISKRGSASLRRTLFLVMSVILQCAPIDEPVY QFMDKKRSEGKPYRVYMMASANKFLRIYYASVKAYLESLEHD >gi|237663594|gb|GG668924.1| GENE 73 62146 - 63111 340 321 aa, chain + ## HITS:1 COG:no KEGG:CD1118 NR:ns ## KEGG: CD1118 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 1 321 1 324 324 425 69.0 1e-117 MAVFRVEKNKGYTVMSNHHLRNKNLTLKAKGLLSQMLSLPEDWDYTLKGLSYINRESIDA IRTAVWELEKAGYIRREQGRDAKGKMADMVYTIYEQPVLENPVLENPTSDNPVLENPTSD NPASENPTQLNKEVQRTDLSKKEKIITDGQSTHSIPIPSPTPAPMEGEAAATPPERKRTG KDEAVRIYREIILENIEYAYLIQDRSIDREQLDEIVDLMLETVCTARKTIRVAGDDYPAE LVKSKYMKLTGEHIRFVLDCLRENTTKVRNIKQYLRAMLFNAPSTISNYYTALVAHDMAQ PDWGKPKSGLPDYSCGEGESL >gi|237663594|gb|GG668924.1| GENE 74 63133 - 63345 252 70 aa, chain + ## HITS:1 COG:no KEGG:BLJ_1241 NR:ns ## KEGG: BLJ_1241 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 70 13 82 82 135 92.0 7e-31 MKQGALIFDERTDRYDIRFDLADYYGGLHCGECFDVMIGGKWRPTRIEMAENWYLVGIRA DDLSGLRVRI >gi|237663594|gb|GG668924.1| GENE 75 63272 - 63577 205 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKWPKTGILSASGPTTFPACGCGFDLYLPAASGGSALDAAFDFLTRRDAIAGRSYSKDHC PVHENGQAHGSSAASGAEKVPATPGQGQKHAAPRPAEPKAA >gi|237663594|gb|GG668924.1| GENE 76 63420 - 63896 85 158 aa, chain + ## HITS:1 COG:no KEGG:BLJ_1242 NR:ns ## KEGG: BLJ_1242 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 156 1 156 158 174 71.0 1e-42 MQEEVTQKTIALSMKTGKLTAQVLQAALKKYLQHRAKGKNTLHHGQQSLKQLKKHGADLS NIEITEANIGAFKPCAKKYGVDFTLRKDKTTQPPHYVVIFKAKDADNLDLAFREFTAKTL SKEQRPSIRKVLSAVKQKAAAQTKQRAKEKIKERGLEL >gi|237663594|gb|GG668924.1| GENE 77 64955 - 65701 297 248 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 9 201 366 562 591 99 38.0 5e-21 MELDTIGDEKTVLYLIMSDTDTTFNFILAMLQSQLINLLCDRADDVYGGRLPVHVRLILD EFANIGQIPNFDKLIATIRSREISASIILQSQSQLKAIYKDAAEIISDNCDSVLFLSGRG KNAKEISDALGKETIDSFNTSENRGSQTSHGLNYQKLGKELMSQDEIAVMDGGKCILQLR GVRPFLSEKFDITKHPRYKYLADADKKNTFDVDRFLTITRRKRQQVVTQDEVFDLYEIDL SDEDAAAE >gi|237663594|gb|GG668924.1| GENE 78 65778 - 65993 70 71 aa, chain + ## HITS:1 COG:no KEGG:Closa_3718 NR:ns ## KEGG: Closa_3718 # Name: not_defined # Def: conjugative transfer protein # Organism: C.saccharolyticum # Pathway: not_defined # 1 71 1 71 71 84 81.0 1e-15 MAFFNSAVTTLQTIVIGLGGALCVWGGINLLEGYGQDNPGAKSQGVKQLVAGGGVALIGV TLVPLLSGLLG >gi|237663594|gb|GG668924.1| GENE 79 66085 - 66948 367 287 aa, chain + ## HITS:1 COG:no KEGG:Ethha_1894 NR:ns ## KEGG: Ethha_1894 # Name: not_defined # Def: hypothetical protein # Organism: E.harbinense # Pathway: not_defined # 2 287 4 289 289 347 63.0 3e-94 MISEIIEEWIKGILMDGITGNLSGLFDTVNAKVGEIAADVGRTPQAWNSGIFNMLHSLSE TVIVPIAGAILALVMCYELIQMITEKNNMHDFDSSMFFRWIFKSAFAILIVTNTWNIVMG VFDATQSVVNQSAGVIIGQTSIDFNTLIPDLESQLEAMSVGALLGLWFQTLVVGLTMNIL SICIFLVTYGRMVEIYVVTSLGPIPLATMGNAEWRGMGQGYLKSLLALGFQAFLIMVVVG IYAVLIQNIGSASDISGAIWGCMGYTVLLCFCLFKTGSISKAVFGAH >gi|237663594|gb|GG668924.1| GENE 80 67159 - 67521 206 120 aa, chain + ## HITS:1 COG:all7280 KEGG:ns NR:ns ## COG: all7280 COG4725 # Protein_GI_number: 17233296 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Transcriptional activator, adenine-specific DNA methyltransferase # Organism: Nostoc sp. PCC 7120 # 4 114 71 192 210 66 30.0 1e-11 MLPEALRLIKAWGFSFKTVAFVWLKQNRKSLTWFYGLGRWTRGNAEICLLATHGKPKRRS ASVHQFIISPIEQHSKKPDVTREKIVELAGDLPRVELFARQKTPGWDVWGNEVECDLILT >gi|237663594|gb|GG668924.1| GENE 81 67797 - 68303 -57 168 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQNAGVLGPDVVEVVPLRRDLKALGVLHRVNFPIEERKLDMNGGVHIVIQVAQFFKDSRL RVRLGKLIADVRKLNALGKDAGRYPAHAVRVHDLVGDALLRRVGPAVALIFTDYRVNFFS LGAGQLCFFGFSWDFLFGQWPLPPVPSGIAAQGRCRCCRSDRDAPLAG >gi|237663594|gb|GG668924.1| GENE 82 69186 - 70055 513 289 aa, chain + ## HITS:1 COG:MYPU_3830 KEGG:ns NR:ns ## COG: MYPU_3830 COG3451 # Protein_GI_number: 15828854 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Mycoplasma pulmonis # 16 276 495 765 853 73 28.0 6e-13 MYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPE AEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKN GLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVS GSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFA DEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKVRPDRALCKAV >gi|237663594|gb|GG668924.1| GENE 83 70548 - 72338 76 596 aa, chain + ## HITS:1 COG:Q0055 KEGG:ns NR:ns ## COG: Q0055 COG3344 # Protein_GI_number: 6226521 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Saccharomyces cerevisiae # 24 595 283 846 854 259 31.0 9e-69 MKPTSEILERIERCSSEHKDGVFTRLYRYLLREDIYYAAYQKLYANKGATTQGIDDDTAD GFSDFYVKELIQSLKDGTYKANPVRRGYIPKKNGKLRPLGIPSFRDKLLQEVVRMILEAI YEPVFDSHSHGFRPGKSCHTALRQISSDFTGVVWFIEGDIQGCFDNINHEKLIEILSRKI KDSRFLNIIRQFLKAGYIENWKYNATYSGSPQGGICSPILANIYLNELDKKFREIAERFD KPRSAYQTPEYHTASKELKRLSYWIDHTDNEAERQELIDQHKAQKKAMRNLPCKPADNKK FTFVRYADDWLAGVCGTKAECEELKTEIAEFLSTELKLTLSEEKTLITHSSEKVRFIGYD ICVRRNQEVKGHRMKNGTWRKSRTLHMKVALTIPHTEKIEKFMFAKKVIRQKENGEFQPI HRAGLLNLADYEIVEQYNAEARGLCNYYNLACDYHTLDYFCYLMEYSCLKTIANKHKTSI RKIIRQHKDGKTWSVPYETKAGTKRVRPVKIADCKRGEASDIIYQRKKFSWKTTIRQRLN ARVCELCGCKEADLYEVHVIRNLNELGNSDWETVMKKKRRKTLVVCSKCHERIHKH >gi|237663594|gb|GG668924.1| GENE 84 72754 - 74745 460 663 aa, chain + ## HITS:1 COG:BS_yddH_2 KEGG:ns NR:ns ## COG: BS_yddH_2 COG0791 # Protein_GI_number: 16077564 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Bacillus subtilis # 543 662 4 123 124 111 43.0 4e-24 MKELKAKAKVTQAMTRDGLTLENQATGEVENISSREAEQDLSAPGPGGTADKLLERADAI HDGHKAKKAAKQAGAVAAEGDAALHRPSARLQLSEEERADPDLQPYIRKSDKRADKLDKA RAAIPKKRVPVKETVFDEASGKAKTVLHFDKQDKGPPSLKPNPAGRPVSEVFLFGHGKIH EVEHENVGVEGGHKGEELAERQAGKAIRSTIRHHRLKPYWDAEKAERRLLSANAEYFYQK SLRDNPEIAQAASNPISRFWQKQQIKRQYAKAARTAGQTAGAAAQGAAKTAGASTKAAKA AAKESERAASFVARHWKGALAVLVLGLLMLLIIGGLQSCTAMFGSAGSGITASSYFSEDS DMLAAEDAYAELEAELQDYLDNYEATHDYDEYHFDLDEISHDPYVLISILSALHDGIFTI GEVQGDLSMLFDKQYILTENVVVETRYRTETDTWTDAEGNTHTDTYQVPYDYYICYVTLE NFDLSHVPVYIMDEETLSFYSLYMSTLGNRPDLFSGSQYPNASTLTPPTYYDVPPEALED ATFAAMLKEAEKYIGYPYVWGGSSPSTSFDCSGFISWVINHSGWNVGRLGAQGLYNICTP VSSSQAKPGDLVFFKGTYDTPGVSHVGLYVGNNVMLHCGNPISYTNLTSNYWQSHFYSYG RLP >gi|237663594|gb|GG668924.1| GENE 85 74768 - 75019 154 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|217388352|ref|YP_002333381.1| ## NR: gi|217388352|ref|YP_002333381.1| hypothetical protein pMG2200_20 [Enterococcus faecalis] conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecium C68] unknown [Enterococcus faecalis] hypothetical protein [Enterococcus faecalis] conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecium C68] # 1 83 1 83 83 108 100.0 2e-22 MATKLDRIEKDIQKTKSKIAEFQKQLRELETQKTEQENLQIIQLVRGMNMKPEEFAAFLR SGAMQAAPAATPYHEQEDNAHEE >gi|237663594|gb|GG668924.1| GENE 86 75009 - 76238 763 409 aa, chain + ## HITS:1 COG:no KEGG:CD1107 NR:ns ## KEGG: CD1107 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 216 394 59 229 244 157 50.0 1e-36 MKNKTRRISRILPALLAVMLCVTAFPVTALAGGNDPAPAPLPEATTEPATGGLEPETDET GTATDGTETEAEKDTGPLTGKDITDLFSALFGSKVSIAATDDGIQITTGTDKKEPEQTGT VTTNGGRLNVRTGAGLDKTAFTQLPNGTTVEVVGTDGDWIKILLPERIGYVHSDYMTVSE KEVAATGEGGFSLSIDPEEIASLLELFNGGGASAALSPDGNLSLIDDIGSAAKNGKQFIT VETKNGNVFYLIIDRDDEGKETVHFLNQVDEADLLTLMEDGETVTPAAVCSCTTKCKAGA VNTNCPVCKTNLTECSGPEPQEPQPEEPEAPEEEPKGGAGGLIVFLLVALAGGGAALYYF KFKKPKAETTGSDDLGEYDFGEDEDLEDEEPETEFDPEADFVSEQEDEE >gi|237663594|gb|GG668924.1| GENE 87 77399 - 78316 144 305 aa, chain + ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 19 244 418 655 709 143 36.0 3e-34 MAGPHIYEAVTATFTCAGQEFTAKGKTVLSPGWKEIERRFRSSLKTDADEDAEAVRELPE LCEGQTFADVAASVTEHFTTPPKPYTEDTLLSAMERAGAEDMPEDAERKGLGTPATRAAI LEKLVQMGFVQRKGKQLIPTKDGINLAVVLPEALTSPQLTAEWENRLTEIAKGQADPDEF MDGIETQARELVQTYSCISEEKQKLFQAERVPIGTCPRCGEAVYEGKKNYYCGNRACQFV MWKNDRFFEERKKAFTPKIAAALLKTGKVKVKGLYSVKTGKTYDGTVLLADTGGKYVNYR IEHRS >gi|237663594|gb|GG668924.1| GENE 88 78465 - 82385 1095 1306 aa, chain + ## HITS:1 COG:no KEGG:CD1105 NR:ns ## KEGG: CD1105 # Name: not_defined # Def: putative DNA primase # Organism: C.difficile # Pathway: not_defined # 929 1298 722 1075 1343 454 67.0 1e-125 MNEVFSIQVHNRQFLEQGKQGVWLDLPTTTETLQAALRDVGITADNPQDFFINGYSCPED RHLAIPYDMVLAADVDELNFLAARLGQLDAAEIAELNAALQNPRGGFENIGQIIDYTENV DYYVHLPDVRGDGQLGDYYLNRSGMVDMPEEWKAGIDTAQFGRHIAQQEQGVFTQYGYLV RSGDEWQRVHEGQPVPEEYRVMHYPQPEADREEPQAQQPEASESPDKAPPPVIPIMLDGM NSKERMKVITDRLETGVQELFESSRYMAYLSAMSKMHDYSLNNTLLIAMQGGSIVAGYNR WQDEFDRHVKRGEKGIKILAPAPFKVKQQMEKIDPATQQPVIGADGKPVTEEQEVTVPAF KVVTVFDISQTEGKDFPMPYISELTGDVQQYQDFFAALERTSPYPISIEPISDGAKGRCF YAKQRIAINEGMSELQTLKTAIHEIAHAKLHAIDREAPAEEQAARPDRSTREVQAESVAY TVCQYYGLDTSDYSFGYVADWSSGRELSELKASLETIRATASELITEIDGHFAQLQQERE ARQEQEAVTVDVTPEAAAPAQAEEEQAPALDPAAEPLVTVLWSESPQLKDGQQMPLHEAD ALFARLDAAYPAEAGYDKTAFRIDCIFQGEPDSYEGRQDFGDRDGSLIEHIQSYHQFYAQ DENWKKHVIATTGIEGWEQDKAHRDMLLGEFVPYMKLHCSLAQMEQTAQGRLQSGETLTP EETAYLGALLSYVQECRPMLNQGQYQLPEPPKLADFDQSLQDYKAQVQAEIAQEAAAAGM TVEEYAAAGYEAPQQDTFSIYQLRGGEETRDYRFEPYERLQAAGLAVDSANYDLVYTAPL DKSTSLEDIYRTFNIDHPADFRGHSLSVSDVVVLHQNGQDTAHYVDSFGYMEVPEFLREN PLRTAELSTEQNENMIDGIINNTPPEPQPEEPEQLSFEDVAVASGQTQEEPPEAAPPQTA VRYYPINEGAARRAKEAMSFSDYRPGSATAEYRHYVDQAVEIAERQKKRVEPEYHEKIDS LLDTYARKLAENMNKGYEITARVPSVLIAGPSNFPVRAKEKQNAASDRNMEEFQYIQGLL DKIRSTGMGGISADDPQAVSKLEKKLEKLEASQELMKAVNAYYRKHGTLDGCPHLTERGI ENLKADMASGWHYEKKPFQSWQLSNNNAEIRRLKGRIEELTRQKEAAYVGWEFDGGTVEI NRVANRLQIFFEGKPDAAVRDELKSNGFRWSPKAGAWQRQLNDTTIRVADRIKCIQPLSG EKPSALQLAARREKEKPSIRAQLNAAKTEQAKQPPAREKSKGLEVE >gi|237663594|gb|GG668924.1| GENE 89 82386 - 83330 577 314 aa, chain + ## HITS:1 COG:no KEGG:EF2322 NR:ns ## KEGG: EF2322 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 312 118 433 434 169 37.0 1e-40 MQKFENVDVLAALEQIMRQNTAFYQSDFGIDKDIIRRDAASDQAADKTLLWMSRPSGTYC FRERDVFLKDTRQYNTWKFYGEQTRDKILAYAVELTGTQGGTIRGNLYELDYPQHFRHVI ETAQPVSVNRLFYEHGTRDIPESQRFDGSPDRVLGNFLYYEAQPHDPAVLQEALRTEQHS RGRAVPGDFKVHVTALHDSRIETEARRIVDSLKDLSAPNSPNKTHFMVEISPHFAAIAST KDNDRLFAMLPYKSLCFTGMKGRHGVYAVINRDERRDVSIRRPRPSIRKQLSDSKQAASP KKAAARTKKNELEV >gi|237663594|gb|GG668924.1| GENE 90 83334 - 83537 161 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517489|ref|ZP_03947538.1| ## NR: gi|227517489|ref|ZP_03947538.1| conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecium C68] conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecium C68] # 2 67 1 66 66 115 100.0 1e-24 MMHFTVEEENLICMYHNADRRRTINRLTAVMPVMDGDMRAQAQQTLSKLERMTDADYDGQ KFHFTDE >gi|237663594|gb|GG668924.1| GENE 91 83837 - 84073 100 78 aa, chain - ## HITS:1 COG:no KEGG:CD1103 NR:ns ## KEGG: CD1103 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 4 77 2 75 76 74 54.0 1e-12 MDGQEKLLDYETIKAAVAGERWATEKVLAHYADYINELSTVEIRQANGKKKKVIDEDIRQ RISLKLLEALPSFPLEQR >gi|237663594|gb|GG668924.1| GENE 92 84624 - 84809 61 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|217388358|ref|YP_002333387.1| ## NR: gi|217388358|ref|YP_002333387.1| hypothetical protein pMG2200_26 [Enterococcus faecalis] mobilization protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecium C68] Rlx-like protein [Enterococcus faecalis] hypothetical protein [Enterococcus faecalis] mobilization protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecium C68] # 1 61 382 442 442 109 98.0 7e-23 MKKLPDLYALKAEYKRLAEEKERLYEKYGEAKKQMQEYGIIKQNVDGILRMTPGKEWTQE L >gi|237663594|gb|GG668924.1| GENE 93 85071 - 85922 202 283 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|223983718|ref|ZP_03633890.1| ## NR: gi|223983718|ref|ZP_03633890.1| hypothetical protein HOLDEFILI_01171 [Holdemania filiformis DSM 12042] hypothetical protein HOLDEFILI_01171 [Holdemania filiformis DSM 12042] # 114 283 8 177 177 97 41.0 9e-19 MFSQEIQSLCGLLQIVELRPPLIACRLLGLNVVFQINPQRNPLALFGRSGDNAAFDTLFD GFLGVGFPQCLAAGKAFLSGSAERNKLSRLDLIALRLHEPQEIIKIFCLRDSGVNGCFEL RFPARPFPLGVPLGIALALTLAGLHHGQSVFLAQPVAGAPDIGIALFVGNVLALIYHIHG TENNVIVDVALINMGSQHIGIFPLQHFLGKLLPDLMGLFRRGFAGGKGLYQVVAQIIALL VCLRQQHFKFNVRCFIRAGKGGHQQLAVSFVRVLDVVKGFFQR >gi|237663594|gb|GG668924.1| GENE 94 86500 - 86871 191 123 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1747 NR:ns ## KEGG: CDR20291_1747 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 121 1 121 122 174 77.0 9e-43 MANIEDCPGFETFGADVKAARQAKRVSRKAMAEKINIDWRYLANIENDGAIPSLPVVIQL IKACGLPVERYFNPEIMREESELRQRVSHKLKLCPEEYLPIIEGAIDSAILIEKPKKNET EDV >gi|237663594|gb|GG668924.1| GENE 95 87016 - 87201 143 61 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_0767 NR:ns ## KEGG: EUBREC_0767 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 57 1 57 62 93 85.0 3e-18 MDYMTLKEAGEKWGVPPRWINYYCAAGRIPGAVKMATIWLIPKTAEKPIDRRTKKGKAVT E >gi|237663594|gb|GG668924.1| GENE 96 87380 - 87526 170 48 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517496|ref|ZP_03947545.1| ## NR: gi|227517496|ref|ZP_03947545.1| hypothetical protein HMPREF0348_0479 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecium C68] hypothetical protein HMPREF0348_0479 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecium C68] # 1 48 8 55 55 84 100.0 2e-15 MTEMENARNKDEEAAAVSAVYGRIEKAGIWILYGEVSRHWITAGLMRL >gi|237663594|gb|GG668924.1| GENE 97 88144 - 88803 296 219 aa, chain + ## HITS:1 COG:yedW KEGG:ns NR:ns ## COG: yedW COG0745 # Protein_GI_number: 16129915 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 3 214 17 232 239 162 39.0 4e-40 MSIRILLVEDDDHICNTVRAFLAEAGYQVDACTDGNEAYTKFYENTYQLVILDIMLPGMN GHELLREFRAKNDTPILMMTALSDDENQIRAFDAEADDYVTKPFKMQILLKRVEALLRRS GALAKEIRVGRLTLLPEDFTVLCDGTELPLTRKEFEILLLLVQNKGRTLTHEIILSRIWG YDFEGDGSTVHTHIKNLRAKLPENIIKTIRGVGYRLEES >gi|237663594|gb|GG668924.1| GENE 98 88806 - 90149 282 447 aa, chain + ## HITS:1 COG:SPy2026 KEGG:ns NR:ns ## COG: SPy2026 COG0642 # Protein_GI_number: 15675803 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 144 426 158 440 462 136 31.0 9e-32 MERKGIFIKVFSYTIIVLLLLVGVTATLFAQQFVSYFRVMELQQTVKSYQPLVELIQNSD RLDIQEVAGLFHYNNQSFEFYIEDKEGSVLYATPNANTSNSFRPDFLYVVHRDDNISIVA QSKAGVGLLYQGLTIRGIVMIAIMVVFSLLCAYIFARQMTTPIKALADSANKMANLKDVP PPLERKDELGALAHDMHSMYVRLKETIARLEDEIAREHELEETQRYFFAAASHELKTPIA ATSVLLEGMLENIGDYKDHSKYLRECIKMMDRQGKIISEILELVSLNDGRIVPIAEPLDI GRTVAELLPDFQTLAEANNQRFVTDIPAGQIVLSDPRLLQKALSNVILNAVQNTPQGGEV RIWSEPGAEKCRLFVLNMGVHIDDTALPRLFTPFYRIDQARSRKSGRSGLGLAIVQKTLD AMSLQYALENTSDGVLFWLDLPLTSTL >gi|237663594|gb|GG668924.1| GENE 99 90991 - 91482 289 163 aa, chain + ## HITS:1 COG:CAC3297 KEGG:ns NR:ns ## COG: CAC3297 COG1876 # Protein_GI_number: 15896541 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Clostridium acetobutylicum # 20 159 99 234 241 119 44.0 3e-27 MELEQLSNGERIDIRISPYLQDLFDAARTDGVYPIVASGYRTTEKQQEIMDEKIAEYKAK GYTSAQAKAEAETWVAVPGTSEHQLGLAVDINADGIHSTGNEVYRWLDENSYRFGFIRRY PPDKTEITGVSNEPWHYRYVGIEAATEMYNQGVCLEEYLKPEK >gi|237663594|gb|GG668924.1| GENE 100 91490 - 91594 91 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLYYGQKKIDTAFPVPASNETGAEKNVLLCGNEI >gi|237663594|gb|GG668924.1| GENE 101 91713 - 92327 159 204 aa, chain + ## HITS:1 COG:PA0749 KEGG:ns NR:ns ## COG: PA0749 COG2720 # Protein_GI_number: 15595946 # Func_class: V Defense mechanisms # Function: Uncharacterized vancomycin resistance protein # Organism: Pseudomonas aeruginosa # 3 196 74 268 273 104 29.0 1e-22 MFNLKLAAKTLNGLLIRPGETFSFWWLVRHADKDTPYKDGLTVTNGKLTTMSGGGMCQMS NLLFWMFLHTPLTIIQRRGHEVKEFPEPNSDEIKGVDATISEGWIDLKVRNDTDCTYQIW VTLDDEKIIGQVSADKEPQALYKITNGSIQYVRESGGIYEYAQVKRMQVALGTGEIIDCK LLYTNKCKICYPLPESVDIQEENQ >gi|237663594|gb|GG668924.1| GENE 102 92324 - 93295 78 323 aa, chain + ## HITS:1 COG:CAC1543 KEGG:ns NR:ns ## COG: CAC1543 COG1052 # Protein_GI_number: 15894821 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Clostridium acetobutylicum # 7 316 3 315 326 270 43.0 2e-72 MRKSVGITVFGCEQDEANAFRALSPDFHIIPTLISDAISADNAKLAAGNQCVSVGHKSEV SEATILALRKVGVKYISTRSIGCDHIDTTAAERMGISVGTVAYSPDSVADYALMLMLMAI RGAKPTMHAVAQQDFRLDRIRGKELGDMTVGVIGTGHIGQAVVKRLRGFGCHVLAYDNSR KMDADYVQLDELLKNSDIVTLHVPLCADTRHLIGQKQIGEMKQGAFLINTGRGALVDTGA LVEALESGKLGGAALDVLEGEDQFVYTDCSQKVLDHPFLSQLLRMPNVIITPHTAYYTER VLQDTTEKTIRNCLNFERSLQHE >gi|237663594|gb|GG668924.1| GENE 103 93288 - 94322 435 344 aa, chain + ## HITS:1 COG:STM0380 KEGG:ns NR:ns ## COG: STM0380 COG1181 # Protein_GI_number: 16763760 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Salmonella typhimurium LT2 # 1 344 1 353 364 230 37.0 3e-60 MNRIKVAIIFGGCSEEHDVSVKSAIEIAANIDTEKFDPHYIGITKNGVWKLCKKPCTEWE ADSLPAILSPDRKTHGLLVMKESEYETRRIDVAFPVLHGKCGGGEDGAIQGLFVLSGIPY VGCDIQSSAACMDKSLAYILTKNAGIAVPEFQMIDKGDKPEAGALTYPVFVKPARSGSSF GVTKVNGTEELNAAIEAAGQYDGKILIEQAISGCEVGCAVMGNEDDLIVGEVDQIRLSHG IFRIHQENEPEKGSENAMITVPADIPVEERNRVQETAKKVYRVLGCRGLARVDLFLQEDG GIVLNEVNTLPGFTSYSRYPRMMAAAGITLPALIDSLITLALKR >gi|237663594|gb|GG668924.1| GENE 104 94328 - 94936 245 202 aa, chain + ## HITS:1 COG:STM1599 KEGG:ns NR:ns ## COG: STM1599 COG2173 # Protein_GI_number: 16764943 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine dipeptidase # Organism: Salmonella typhimurium LT2 # 15 201 43 252 256 135 32.0 5e-32 MENGFLFLDEMLHGVRWDAKYATWDNFTGKPVDGYEVNRIIGTKAVAFALREAQIHAAAL GYGLLLWDGYRPRTAVDCFLRWAAQPEDNLTKEKFYPNIERAELITKGYVASQSSHSRGS AIDLTLYHLDTGELVSMGSNFDFMDERSHHTAKGIGDAEAQNRRCLRKIMESSGFQSYRF EWWHYKLIDEPYPDTYFNFAVS >gi|237663594|gb|GG668924.1| GENE 105 95528 - 95623 62 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSPATMKRGACSMLFARRYCVTRPKATWLK >gi|237663594|gb|GG668924.1| GENE 106 95962 - 96195 102 77 aa, chain + ## HITS:1 COG:no KEGG:LMHCC_1339 NR:ns ## KEGG: LMHCC_1339 # Name: not_defined # Def: conjugative transposon protein # Organism: L.monocytogenes_HCC23 # Pathway: not_defined # 11 71 11 71 80 66 49.0 3e-10 MKNPNYKGIELLPLSVIEAARAGDAGAVERVLQYYSGYMNKLCTRTLYDENGYPHVCLDE AMKRRLEIKLIHAIVTN >gi|237663594|gb|GG668924.1| GENE 107 96619 - 96819 196 66 aa, chain + ## HITS:1 COG:no KEGG:Tresu_1933 NR:ns ## KEGG: Tresu_1933 # Name: not_defined # Def: Excisionase from transposon Tn916 # Organism: T.succinifaciens # Pathway: not_defined # 4 66 5 67 67 111 93.0 1e-23 MNHDVPIWEKYTLTIEEASKYFRIGENKLRKLAEENPASGWVIMNGNRIQIKRKQFEKII DTLDTI >gi|237663594|gb|GG668924.1| GENE 108 96903 - 98096 3 397 aa, chain + ## HITS:1 COG:SPy2122 KEGG:ns NR:ns ## COG: SPy2122 COG0582 # Protein_GI_number: 15675872 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pyogenes M1 GAS # 13 382 1 361 381 84 27.0 4e-16 MSEKRRDSKNRVLRSGESQRKDGRYAYKYVDTFGKPQFVYSWKLVPTDKTPAGKREDISL REKEKEIQKDLDDGIDTIGKKMTVCQLYAKQIRHRGNVKHNTKLGRERLMRILEQDRLGS CPIDSVKLSDAKEWALRMKEKGLSYKTINNDKRSLKAAFYTAIQDDCIRKNPFDFQLSDV LDDDTEPKVPLTPAQEESFLSFIQGDKVYQKHYDAIVILLGTGLRISELCGLTDKDLDFE NRVIIVSHQLLRNTGVGYYIDEPKTQSGVRKIPMNEEVYQAFQRVIKNRKGAKPFIIDGY ANFLFLKQNGYPMTAVDYGGMFGRLVKKYNKSHEEALPKTTTPHAMRHTFCTRLANAGMN PKALQYIMGHSNITMTLNYYAHATFDSARAEMERLAA >gi|237663594|gb|GG668924.1| GENE 109 98579 - 100162 794 527 aa, chain - ## HITS:1 COG:SP1529 KEGG:ns NR:ns ## COG: SP1529 COG2244 # Protein_GI_number: 15901374 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Streptococcus pneumoniae TIGR4 # 5 523 1 513 529 212 30.0 1e-54 MREKLLIGSFWLSFFNIVCKILGFIYLIPWLKFMGTIHNQQTAQAIYNVAYLPYALFLSL GTAGFPSGIAKKIAELNINGNKNQIKELFKSGLIVMEIIGILSALLMFIFAPTLSKISPI VDHTAGITAIRSLCFSLLIIPILSALRGYFQGLNYSFPFGVSQLLEQLVRVVCILVGTYL IRVQFNGSILSAVILSTFASSIGGIVAFLYLLFIGKKRNLFQLKDFYFLPLKSISHMKGL AIDIIKESLPFVYVGSAISILQLIDQFSLKVLYSLFFPQSSLSELQTLYTLASANPNKLA PVLLGIIGSITISALPLISTVKSKPELLQGTSQILRLAFTFLLPTSIGMIILCNPLNTLF FGFNLDGSRYLSATIISTSLLGIFTIVLSILQALSFHKKAMQITSITLLLKLIIQIPCIY LFKGYGLSIATIICTMFTTIIAYRFLSRKFDINPIKYNRKYYSRLVYSTIVMTILSLLML KIISSVYKFESTLQLFFLISLIGCLGGVVFSVTLFRNKFISKLGKLF >gi|237663594|gb|GG668924.1| GENE 110 100609 - 100902 137 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517512|ref|ZP_03947561.1| ## NR: gi|227517512|ref|ZP_03947561.1| conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis HH22] hypothetical protein HMPREF9515_03134 [Enterococcus faecalis TX0860] conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis HH22] hypothetical protein HMPREF9515_03134 [Enterococcus faecalis TX0860] hypothetical protein HMPREF9517_01713 [Enterococcus faecalis TX1341] hypothetical protein HMPREF9507_01430 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9506_00646 [Enterococcus faecalis TX0309A] # 1 97 1 97 97 142 100.0 1e-32 MKFISPMIFTLLLVIFTLVFELNLVSIAYFALLLSIFVHELGHLAFGLFNKVRPESLIFG FIKLSWENQFKIRLNTQWGFLVDYLDISQLRLIIRKF >gi|237663594|gb|GG668924.1| GENE 111 101168 - 101422 91 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|20385129|gb|AAM21178.1|AF329367_5 ## NR: gi|20385129|gb|AAM21178.1|AF329367_5 CylI [Enterococcus faecalis] # 5 83 192 270 341 123 97.0 4e-27 MQNNKKNKELPLYVLNTFLLYVIYEYLIDKNNRKLKLIYPILSKEDKILNNKSYLQNFYL ANLYMIEYILSVDNKQTFKKSRLN >gi|237663594|gb|GG668924.1| GENE 112 102059 - 102169 136 36 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294779359|ref|ZP_06744761.1| ## NR: gi|294779359|ref|ZP_06744761.1| conserved domain protein [Enterococcus faecalis PC1.1] conserved domain protein [Enterococcus faecalis PC1.1] # 1 36 1 36 230 70 100.0 3e-11 MKKRICITTGVAMLLGLSPILTTGATVYANEESNYV >gi|237663594|gb|GG668924.1| GENE 113 102203 - 102559 392 118 aa, chain + ## HITS:1 COG:no KEGG:EF0562 NR:ns ## KEGG: EF0562 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 23 118 1 96 96 175 100.0 7e-43 MEALANQYKGVSLFETEFNKENMTPVQLELYNKVLDLQYDIALQNGSAKGMSREQYKQYL SNAIQGFIIQPRNTGHGLISVDVLETVLDTALNVVLIIGSFGSMSAMVKELGQEGAKN >gi|237663594|gb|GG668924.1| GENE 114 102706 - 102981 125 91 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315027536|gb|EFT39468.1| ## NR: gi|315027536|gb|EFT39468.1| conserved domain protein [Enterococcus faecalis TX2137] # 1 91 6 96 96 105 100.0 9e-22 MYLVIGSILIIFIVSVFISTIGALNEKIKNKFYLFVKFSFNISIACIFLGGISFLYAYFV FDEFKNFKIILISIFLFVISYKGYMDKKYFP >gi|237663594|gb|GG668924.1| GENE 115 103026 - 103319 244 97 aa, chain + ## HITS:1 COG:no KEGG:EF0563 NR:ns ## KEGG: EF0563 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 97 1 97 97 126 98.0 2e-28 MVQLISIIFAFLIIYTLFKTRETSNSSRKLRMLVYTFLGIIFLLGLVSVVLGTYGLLNSY NISGNWRINMSSILVVLAGILLVVLSYVGISKFKMNC >gi|237663594|gb|GG668924.1| GENE 116 103329 - 103481 87 50 aa, chain + ## HITS:1 COG:no KEGG:EF0564 NR:ns ## KEGG: EF0564 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 50 1 50 50 98 100.0 8e-20 MKKVISTILLVILFVGSGYVVNAAPEMKSLTNFETNDQHYDLQGIEHSFC >gi|237663594|gb|GG668924.1| GENE 117 103648 - 103893 222 81 aa, chain + ## HITS:1 COG:no KEGG:EF0566 NR:ns ## KEGG: EF0566 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 81 1 81 81 153 100.0 2e-36 MKNELDFNQVKSEIDKDHPVLLCYKPNKTDLMEPYLLAVAHGYVYVAPDGQNTKEPFMST SIWMSNYIYPSILTTLANKNK >gi|237663594|gb|GG668924.1| GENE 118 104300 - 104380 208 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTIILGIIGLLLMIYLFWFLFKGEEL >gi|237663594|gb|GG668924.1| GENE 119 104377 - 106053 1304 558 aa, chain + ## HITS:1 COG:lin2830 KEGG:ns NR:ns ## COG: lin2830 COG2060 # Protein_GI_number: 16801890 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Listeria innocua # 1 556 1 558 561 517 55.0 1e-146 MNSLIYQGLFFLFILLLLAVPLGWYIKEIMQGEIPKGVSFLQPVERLFYKAIGPISKKEM SAKRYALNVLLLSFFSIVLLIAILMTQHFLPGGSSVKNLTLPLAINTAVSYVTNTNWQAY VGETTLSNTSQMFGLTAQNFVSAGVGLSVLVALLRGLSQVKKKALGNFWQDLTRSLVYIL LPISIILAVLLISQGTVQSFQSGVAYQGLEGKSLWLHLGPVASQVAIKQLGTNGGGFFGA NSAYPFENPTLFSNFLENIAILLLPAALIFAFGFWVKDWRQGRTIMIVSLFFLLLAFVGV AFSEYYGPEFTHVLGSTNLEGKEIRFGIGWSSLWSVGTTAASNGSVNAVLDSFTPLGGAI PMFLMQLGEIIFGGVGSGLYGMLAFLLLAVFIAGLLVGRTPEYLGKKIEAFDIKMASLVI LTPLMLTLFGAMALVLHPEVMSWLTNQGPHAFTELLYGATSLANNNGSAFGGLLANTTFL NLLASLMMAVSRYLPIIAILLLAENMGSKKKAALSSGTLSTVSPTFVSMLIIVILVIGAL SFLPSLALGPIAEFFTMK >gi|237663594|gb|GG668924.1| GENE 120 106069 - 108099 1781 676 aa, chain + ## HITS:1 COG:lin2829 KEGG:ns NR:ns ## COG: lin2829 COG2216 # Protein_GI_number: 16801889 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Listeria innocua # 4 674 6 678 681 920 72.0 0 MKKIYQWAVGQSFKKLDPRQQVKNPVMFVVYLGALITTILCFYPMGIPLWFNISITIFLW LTLLFANFAEAVAEGRGKAQADSLKQAKKEVMTYKINSLEDIKEENFIELQSSDLKRNDL VYVRAGEQIPADGDVIEGAASVDESAITGESAPVIRESGGDRSAVTGGTTVVSDYLVIRV TSENGQSFLDKMIAMVEGTQRKKTPNEIGLQIFLITLTIIFLTVSITLVPFTDFSSQLSG KGEALSLVIVIALLICLAPTTIGALISSIGIAGMSRLTKENVIAMSGRAIEAAGDVDVLL LDKTGTITLGNRRASDFLPVHGVSEEQLADAAQLSSLADETAEGRSIVILAKERFNLRER EFQQSEVKFIDFSAKTRMSGIDYRGDVIRKGAADTMKKYVQSKGEDYPSECDKIVDKIAR AGGTPLVVVKNNRVMGVVYLKDIVKNGVKEKFADMRKMGIKTIMITGDNPLTAAAIAAEA GVDDFLAEATPENKMNLIREYQEKGHLVAMTGDGTNDAPALAQADVAMAMNTGTQAAKEA GNMIDLDSSPTKLLQVVQIGKQLLMTRGALTTFSIANDIAKYFAVIPVLFYSIYPQLDRL NIMGLGSPLTAILSAVIYNAFVIVALIPLALKGVRYQEKPASQILSHNLLIYGLGGIIAP FIFIKIIDLILSLIIL >gi|237663594|gb|GG668924.1| GENE 121 108113 - 108643 475 176 aa, chain + ## HITS:1 COG:lin2828 KEGG:ns NR:ns ## COG: lin2828 COG2156 # Protein_GI_number: 16801888 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Listeria innocua # 2 174 9 188 190 120 44.0 9e-28 MKKSILGSLRFLIFSLIVFGGLYTVAVTGIGQLFFSDQANGSKVSVNNQVVGSKLIGQTF EQAKYFSGRSEEVSQLSPVSAEQKQLVEKRTVAELEKNPAEKKVPNDLLTASASGVDPDI SLAAAHFQVARISKERGLSQQSIRKLIDKHSQKDWFSDRFYVNVLQLNLALDKLGI >gi|237663594|gb|GG668924.1| GENE 122 108712 - 111282 1985 856 aa, chain + ## HITS:1 COG:lin2827 KEGG:ns NR:ns ## COG: lin2827 COG2205 # Protein_GI_number: 16801887 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Listeria innocua # 8 841 17 873 896 658 41.0 0 MQTTEEMQSGDGRRGRLRIFFGFAAGVGKTYGMLTEAHELLMMGKHVVVGYIEPHDRPDT NRLLEGLPQIPPKNIFYKQMVLTEPDIDQIIQQKPEIVLIDELAHSNAEGSRNRKRYQDI DELLNAGIDVFTTVNVQHIESLNDIVEEVTGIEVKETVPDTFLRQATIRVIDVEPDELIE RLEQGKIYANENAKRALKNFFIPQKLDQLRGLAIQRASDHINRISGKTIGIQSKLLTVVN DAFPKMTEKCIRWTARLAQGLVADWTVIQVRTQENTPTNIPLADKLGAEVISIEEDDSFE TIVEFAKMTGVTDIIMGKNLRQPWYEKIFIEAFDDRLLKRLKDTELHLIPFNEEKRSLFF KTRKVIEGGGKDLVIAIGGVFLATVVTELMQYIHVGDQNLMLIYISFVLLVARTTSGYFW SSLSSILSVLSFNWFFVEPLYSLTVYKQGYPFTLLLMLVVALMSSNLMIRLKKQADTSMK KEHQMEILYELNKRYVLVESRKQILDISATYLSRLLEREVIIFDRQVKTESVHCINEKKS ILNNEDEAAVAFWAAKNQKEAGNGTDTLNGAKGFYLPIAAGRKTLAVLGIERNADLDLEN DQLNYLKLVLTQIAVILEQTELKDEKEQVELENEREKVRSNLLRAVSHDLRTPLTVISGI AETLGIGNDLKEETQRKLLKDIQEESQWLIRMVENLLSITRINMDTMKVNKTAEPVEEVI EAVYKHLRKVYPDGQVDIHLPEEVIFIQADPILIEQALFNLIENAFRHGENDLPVKLNVY QEKEQTVFEIENHGEIPLKQFQKIQSNLSGTNEVPVDSKNGLGIGLSIVKTIVHAHNGKM EMTIGRGKTLVRIYLK >gi|237663594|gb|GG668924.1| GENE 123 111294 - 111983 651 229 aa, chain + ## HITS:1 COG:lin2826 KEGG:ns NR:ns ## COG: lin2826 COG0745 # Protein_GI_number: 16801886 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Listeria innocua # 2 225 4 230 231 220 49.0 1e-57 MKQSILLIEDDPNITDFMEVVLGQERYQLTIASTGMEALTAFQTTSFDLVLLDLGLPDID GIDLLKILRKRMHLPIIIISARNNEEEKVKALDLGADDYVTKPFGTNELLARIRTALRHQ NVQTESLTVVENKDLKIDFEKQLVYKKGQEIHLTKNEYRILALMFRQLGKVVAYQTLMTK VWGPYSNDSQTLRVNMSNIRKKIESNTLKPEYLITEIGVGYRLRDHRLE >gi|237663594|gb|GG668924.1| GENE 124 112584 - 112646 68 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLKSENAYLKELSRLRLEDE >gi|237663594|gb|GG668924.1| GENE 125 113465 - 113575 57 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHKNIELKWYCLRTHFWTFSHRSPFYREGGHFFVEN >gi|237663594|gb|GG668924.1| GENE 126 114665 - 114784 71 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVHSFISRCSRHVWIRNIIANGCIRNASFAGDRPYEHKK >gi|237663594|gb|GG668924.1| GENE 127 115395 - 115475 64 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKYTKWLTDEGLIKIERVSTRGSRR >gi|237663594|gb|GG668924.1| GENE 128 115585 - 115704 56 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MENALFKRGAGYEYTEVTKELTENGIKITKKGYKTIELY >gi|237663594|gb|GG668924.1| GENE 129 116385 - 116645 174 86 aa, chain + ## HITS:1 COG:no KEGG:EF0555 NR:ns ## KEGG: EF0555 # Name: not_defined # Def: PTS system, IIA component # Organism: E.faecalis # Pathway: Fructose and mannose metabolism [PATH:efa00051]; Amino sugar and nucleotide sugar metabolism [PATH:efa00520]; Metabolic pathways [PATH:efa01100]; Phosphotransferase system (PTS) [PATH:efa02060] # 1 86 49 134 135 86 58.0 2e-16 MNKILEETSDIRNIIILIDLMGGTPANVTMIKASMDRRIQVVTGMNLRMVLESYFKINEE KLAEHLIEISISSIKIPEIQISGGEE >gi|237663594|gb|GG668924.1| GENE 130 117117 - 117251 127 44 aa, chain + ## HITS:1 COG:no KEGG:EF0573 NR:ns ## KEGG: EF0573 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 41 1 41 536 78 100.0 7e-14 MKSKIILGGLLLSTAALVSLQSPQITSAESLTNSAEIIVPLLAS >gi|237663594|gb|GG668924.1| GENE 131 117631 - 117735 114 34 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517530|ref|ZP_03947579.1| ## NR: gi|227517530|ref|ZP_03947579.1| conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis TX0104] # 1 34 64 97 97 67 100.0 3e-10 MELPKTGEKYNGLPMYLGLFTVIVSIIGLKKNKF >gi|237663594|gb|GG668924.1| GENE 132 117916 - 118005 60 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLVNKFSFLSTSSLILLYTNKVVLGECSH >gi|237663594|gb|GG668924.1| GENE 133 118149 - 118868 200 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 227 1 237 245 81 27 4e-14 MLEVKKLTVCYNDFLALNEISLKIQEGALTGIFGPNGAGKSTLLKAMLNIIPHQGEVSIN NEDINKKLVKIAYVEQKADIDFTFPIKVKECVSMGTYAGMKVFQRIKNAEWQKVSKALEK VDMGKYSNHQIGELSGGQFQRVLLARCLAQNADFIFLDEPFVGIDLVSERIIMDTLKELK HQGKTVLIVHHDLSKVKKYFDNIILLNRNLIAHGSVESVFNEENLKKAYGDTIFIGEGE >gi|237663594|gb|GG668924.1| GENE 134 118870 - 119712 721 280 aa, chain + ## HITS:1 COG:L149891 KEGG:ns NR:ns ## COG: L149891 COG1108 # Protein_GI_number: 15673299 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Lactococcus lactis # 1 276 1 276 281 347 84.0 1e-95 MLQNFINGLYDFHFLQNALITSVVIGIVSGTVGCFIILRGMSLMGDAISHAVLPGVAISY ILGINFFIGAIVFGLLASIIITFIKSNSVIKGDTAIGITFSSFLALGVILIGVANSSTDL FHILFGNILAVQDIDKWITIGVSVLVLVIVVLFFKELLITSFDPLMAKAMGMNVNFYHYL LMVLLTLVAVTAMQSVGTILIVAMLITPAATAYLYANSLKTMIFISATVGASSSLLGLFI GYSFNIAAGSSIVLTAASLFVISFLISPKQKFLRKKERSL >gi|237663594|gb|GG668924.1| GENE 135 119709 - 120659 920 316 aa, chain + ## HITS:1 COG:SP1650 KEGG:ns NR:ns ## COG: SP1650 COG0803 # Protein_GI_number: 15901485 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Streptococcus pneumoniae TIGR4 # 12 316 4 309 309 450 77.0 1e-126 MMRKWKVVVGSLGMLIALFIFGACSTNSKDKDTVASNEKLKVVVTNSILADITENIAKDK IDLHSIVPIGKDPHEYEPLPEDVQKTSKADLIFYNGVNLETGGNAWFTKLVKNANKEENK DYFAASDGIDVIYLEGQSEKGKEDPHAWLNLENGIIYAKNIEKQLAEKDPDNKKFYKENL DKYIEKLDSLDKEAKSKFASIPNDKKMIVTSEGCFKYFSKAYNVPSAYIWEINTEEEGTP DQIKHLVEKLRTTKVPSLFVESSVDDRPMKTVSKDTNIPIYSTIFTDSIAEKGQDGDSYY AMMKWNLDKIAEGLSK >gi|237663594|gb|GG668924.1| GENE 136 120674 - 120907 172 77 aa, chain + ## HITS:1 COG:no KEGG:EF0578 NR:ns ## KEGG: EF0578 # Name: not_defined # Def: iron-dependent repressor family protein # Organism: E.faecalis # Pathway: not_defined # 1 77 1 77 77 116 98.0 2e-25 MVQIKTTTILIYLLAIQELSKRKKKLKNNDLAKVLSVSPASVSEMLAKLRYEDYLDIGFQ LTDKGKKLIDDYKKGFK >gi|237663594|gb|GG668924.1| GENE 137 120936 - 121028 95 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAIGVIMIGLILIAGYNFFKSFSDYFRKGE >gi|237663594|gb|GG668924.1| GENE 138 121303 - 121821 314 172 aa, chain + ## HITS:1 COG:no KEGG:EF0579 NR:ns ## KEGG: EF0579 # Name: not_defined # Def: transcriptional regulator, putative # Organism: E.faecalis # Pathway: not_defined # 1 172 1 172 172 315 100.0 6e-85 MTAGVTTGAFYKHFTSKEALFEEIIQPHINALINMYNEEFAKYLLNLENIDIEKSWRENF NELDPFINYIFENKRIFDLVLFQSAGTKYQDIVEKITSFVTKKTVCCLDKLKTIGMINQN LVFNEEEIHFYIYSFYATFYDILKHSYSKEKTMLLTRRLYQFSVPGWIELLS >gi|237663594|gb|GG668924.1| GENE 139 121951 - 122619 248 222 aa, chain + ## HITS:1 COG:SP1437 KEGG:ns NR:ns ## COG: SP1437 COG0619 # Protein_GI_number: 15901289 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 81 222 4 144 147 69 30.0 5e-12 MSKINPLTLITLNIFFPVIIFLGKGNIFQVGCFIIATVLVLMFRKIKTCIYFILIYSVLF LAMKIIDAIKIEFFTIFFGTSLYIVFRMLPVVMISWLLVSVYTSNELLSSLEKIHLPKKI MLSITVVIRFFPTYRSEIRMIKESLKMRNIRLSFFQPLQYLEFLLVPVLIRATMIAEEMT ANAITKGIESPVKRSSYYKTNMSLLDYIILFSVTIFFLSILI >gi|237663594|gb|GG668924.1| GENE 140 122726 - 124045 789 439 aa, chain + ## HITS:1 COG:MTH454 KEGG:ns NR:ns ## COG: MTH454 COG1122 # Protein_GI_number: 15678482 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Methanothermobacter thermautotrophicus # 2 416 36 462 480 234 33.0 3e-61 MITGSSGSGKSTLLKLMNGLIPRLYDGKLVGEILFENNSLQSLTQESISKNIGYVSQDPR GQFFTTNTTSELVFSMENFGFTKEHMDKRINELAELLDLSNILDKNIFSLSSGERQKISI GCSLSLNSKLIILDEPSSNLDFKATKKLADLLCDLKNKGFTIVIAEHRFYYLKELIDQVL FVKNRTVKTTTIQLLKTENNNALRKFDIFNSSIEVPYIEKASADVLKVEEITYENILKDI NFDVKVGDVIGLVGKNGVGKTTLLRILMKIIRPTKGKIIENKKNLSSPFLVMQEMDYQFF TESVRSELALGNEIVSKDQQEKILKKMELYKMKDQLPFDLSGGEKQRLLVSIASLSKTNL FLFDEPTSGLDYINMERIADLIKDLKEKGAVVIATHDPEFLYKTCNRIIYLKNGGIKKDI KLRVEDSTLIEQIFNDITK >gi|237663594|gb|GG668924.1| GENE 141 124063 - 124632 551 189 aa, chain + ## HITS:1 COG:no KEGG:EF0582 NR:ns ## KEGG: EF0582 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 189 1 189 189 307 100.0 2e-82 MKTKDYIFIGLATVISLVIYFFSIMVSSIGGAFGHSISPGIFGLLSGIIFVYISYNYPRK GIFTIYTIVLLLFFTLMGGAYLPWFISSISMAILADIILYVFGYDRAIPQVVSWVLMQLG SAAGQWIPIWFFTDRFRQDWIDRGQSAATMDAMIHYAVGIWGIISVLVVASLSMIGVLIG RKVLKKYKK >gi|237663594|gb|GG668924.1| GENE 142 124742 - 126496 214 584 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 336 556 2 226 245 87 27 9e-16 MKVYKKLFSYVPKMKYYGWLATLFSDFSVVLTVYGYYSIYKFLQSLIIVGDEYLAKSYAV QTVAWLTLGALFYIFSGLFSHILGFRLETNLRKKGISGLTKASFRFFDLNSSGYIRKTID DNAAKTHMAIAHLIPDSAQAIVTPVLSVALGFFINFKIGLVLIAMLVIGVFLLKKMTGNT NFIQKYQESLDVLSSETVEYIRGIQVIKIFGAKVTSFKALNKAINDYAKFAYKYSLSGKT PFVLFQWLFFGIVCILIVPITFFITSLTTPKILAVDLLMLFFLSGIIFVSFMRIMYVSMH LFEARYAVETLDSLYLEMKQDQLKYGNETQIKNCDIAFENVSFSYKEECVLENFNLVLEQ KRIYALVGKSGSGKSTIAKLISGFYNVDKGQIKIGGKPLNHYSKDTIINTIAFVFQDTKL FNQSIYDNVSIANTQAPASKVFDALRLAGCESILKKFPEREHTLIGSKGVYLSGGEKQRI AIARAILKDAKIVIMDEASASIDPDNEYELQKAFQYLMKEKTVIMIAHRLSSIKSVDEIL VLSEGKIVERGNHNELMAKHRVYKQLVTNYENANDWRLDNEKFL >gi|237663594|gb|GG668924.1| GENE 143 126450 - 128222 203 590 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 342 552 7 214 311 82 29 2e-14 MRMQMIGGLTMKNFYKKKFALTDQGAEALTKASISSFFVYCINMVPAFIIMMLIDELVLE NAKPRWLYFAVSFVTLLFMYWLLDREYENLYNSTYKESAHLRVQIADDLSNLPLSYFSKH NLSDLSQTIMSDVEGIEHAMSHAIPKSGGMALFFPFISVMLLVGNVKMGLAVILPTLFSF VLILLSKKSQTKANTKYYDTLRENSEEFQETIELQQEINSFNLSKKVQDRLFKKMEESER IHLKVELSTFSVMALSSIFSYVSLAVVILVGVHLLLTGEVTILYVVGYLLAAIKIKDSFD SMKEAVLEIFYLAPKIQRIRAMKETSIQEGSDSPLKSFDVELRDVSFSYDNNTPILDHIS FTAKQGEVTALVGASGSGKTSILKLVSRLYDYDEGCILIDGYDIKRVSPASLFSKIAIVF QEVTLFNTSILENIRIGNSQASDEEVKKAARLANCEDFIEKLPDGYHTLVGENGSSLSGG ERQRLSIARAFLKNAPILILDEITASLDAENEKRIQESLNRLIQDKTVLIISHRLKSIEK VNKIVVMDQGKVVDQGTHSELYRRSEIYKNLIKKTKLSEKFVYEKEAQSR >gi|237663594|gb|GG668924.1| GENE 144 128745 - 129014 456 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227517541|ref|ZP_03947590.1| 30S ribosomal protein S14 [Enterococcus faecalis TX0104] # 1 89 1 89 89 180 100 8e-44 MAKKSKIAKAKKQMAMIEKYADKRQELKAAGDRTALAKLPRDSNPNRLRLRDQTDGRPRG YMRKFGMSRIKFRELDHQGLIPGVKKASW >gi|237663594|gb|GG668924.1| GENE 145 129008 - 129208 337 66 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227554644|ref|ZP_03984691.1| 50S ribosomal protein L32 [Enterococcus faecalis HH22] # 1 66 1 66 66 134 98 5e-30 MVRGGNIMAVPARKTSKAKKRLRRTHQTVVKPEISFDEANGDYRRSHHVSLKGYYNGKKV IKGASK >gi|237663594|gb|GG668924.1| GENE 146 129240 - 129617 524 125 aa, chain + ## HITS:1 COG:no KEGG:EF0587 NR:ns ## KEGG: EF0587 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 125 1 125 125 214 99.0 1e-54 MEIIYPPLVEEGLKYYLETTQQSLDKSTFYRSMVERGIITETGLPTQQAIENGLVKDYYE DQGLSFDDFFRIYPIFEEYDEELFQCIDGYWEIPVDMKENLASQLESGELTFEDAQQIQA YLEDR >gi|237663594|gb|GG668924.1| GENE 147 129638 - 129787 249 49 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227517544|ref|ZP_03947593.1| 50S ribosomal protein L33 [Enterococcus faecalis TX0104] # 1 49 1 49 49 100 100 8e-20 MRQNIILECVETGERLYLTSKNKRNNPERLELKKYSPKLRRRAIFKEVK >gi|237663594|gb|GG668924.1| GENE 148 130313 - 131863 1225 516 aa, chain + ## HITS:1 COG:lin0436 KEGG:ns NR:ns ## COG: lin0436 COG0726 # Protein_GI_number: 16799513 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Listeria innocua # 57 515 9 465 466 196 31.0 7e-50 MSDKNIYARRSQRHKQEPDICENANQLNEAVKPKTGNENKQPKIPKKKSNYSKYIFALFT ALILVIVATGGYIVYTLKQQEVEAQAKYETAVKNLMASIQEEQDQSGISTKIDTINDGEN KCLIYRPVYESTVPFKNANQLLDELAQKQQKKHREKEVLTVARIKATAISSKIGQYRIEA DSFIWDRSKENFKKPDSISEKAIYVSEKTGKEITNKDLIPDEGSLLGIQQVIQQSILDHA KEPKKIIDAVLTMDRISYESKMTYTPDELTIDLPKNTTGTTKVILKYRDIAPFIDTDLVS QESIKDALPALDENKKYVALTFDDGPNNSSTLDLLNILKTNNVKATFFMLGQMVDQNPDV AKQVHDEGHEVACHSYSHPQLNTLSTDELQSEMNKANKAIFKATGVLPRNIRPPYGAIDK KSAETIGMPIIQWNIDSLDWKTRNPEAINNVVKQNVFNGAIILIHDIHHESVKAVSGLIT MLKNEGYEFVTIDQLLSGKQKPLHQYFGMNDERLVD >gi|237663594|gb|GG668924.1| GENE 149 132228 - 133361 709 377 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315025625|gb|EFT37557.1| ## NR: gi|315025625|gb|EFT37557.1| LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis TX2137] # 1 373 1 373 1238 616 100.0 1e-175 MFFTGKERNLKFAIKKKHGGGGAASVIIGCIIFGSIAFGGTTLAYADEVHNSINQDIQDS GSTIIGENDSSTKSAEYKMIHEIDGTKISNGENSKETTTSSGTILAEEAIESSNQKNSKT SEVEQDLHKDVSGSESVKQVETSDSIKKSEESAVKTLNLDDSQENTNSITTKAENDALST VNDEKVLNESDSIIKSIPSETENVDNNSKSDNRDLVENSVETTKEIMKEADKTEIAKRND NISVLNAGTESFNDSDKIRRSKRDNESPVPSLSIQMPVTKEIYENDSTIKGKSEPGVTIK IYKNGIELGSIKADDDGNFEYPLESQAIKSDNYSFVAEKDGAKSIESSVNVVENKEIVGN QRDAYTPYGFGIYIWYI >gi|237663594|gb|GG668924.1| GENE 150 133315 - 135660 1603 781 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517548|ref|ZP_03947597.1| ## NR: gi|227517548|ref|ZP_03947597.1| conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis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gi|237663594|gb|GG668924.1| GENE 151 136653 - 136811 167 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|21693365|gb|AAM75312.1|AF454824_109 ## NR: gi|21693365|gb|AAM75312.1|AF454824_109 EF0109 [Enterococcus faecalis] # 1 52 1873 1924 1924 103 100.0 5e-21 MPFENLFSTTNDYSQFPKTGEKSDSILTIYGGLLFLSSIGLLGIKKRKNNTN >gi|237663594|gb|GG668924.1| GENE 152 137378 - 137467 112 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFNQKEEKQFKYAIKKKKGAVEHFFVLSE >gi|237663594|gb|GG668924.1| GENE 153 137624 - 138019 209 131 aa, chain + ## HITS:1 COG:no KEGG:EF0594 NR:ns ## KEGG: EF0594 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 118 4 121 124 201 97.0 6e-51 MCFENKGYFFEISDIAEFVKVERRKQRGSATLNTYDYILINIVKQLCKQQKKLIYLINSK NFKTILSNLIEVDAKISDYLFFLINCRFETDKEVIECVESVEKDALRDYYCGLNFSDNIN NYKLIVHTTKY >gi|237663594|gb|GG668924.1| GENE 154 138357 - 138461 88 34 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|312908097|ref|ZP_07767077.1| ## NR: gi|312908097|ref|ZP_07767077.1| transposase, IS4 family [Enterococcus faecalis DAPTO 512] transposase, IS4 family [Enterococcus faecalis DAPTO 512] # 1 34 16 49 585 67 97.0 3e-10 MEQYIPETDVAFAVNDLVEAMPQTLFLKLEEQLG >gi|237663594|gb|GG668924.1| GENE 155 138480 - 138902 335 140 aa, chain + ## HITS:1 COG:BH0682 KEGG:ns NR:ns ## COG: BH0682 COG3666 # Protein_GI_number: 15613245 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 1 135 57 191 522 148 56.0 3e-36 MMLKIILYAYTQRVFSDRKIGFLLDDSYRMRWLANHEQVSYRTINRFQSQETTAHLLAEA FVLFRCQLITNQVIDNEALYIDGTKIEADANKFSFVWRKATNQYEASLDKQSNEFYQTLY KEEILPSLKEENQSDRLTSN >gi|237663594|gb|GG668924.1| GENE 156 139137 - 139667 331 176 aa, chain + ## HITS:1 COG:BH0682 KEGG:ns NR:ns ## COG: BH0682 COG3666 # Protein_GI_number: 15613245 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 1 174 274 447 522 168 56.0 6e-42 MRMKDDYMRNSQLKPGYNLQIATENQYVLAYDLFPNPTDIKNLQTFLDSFLEQHNELPEY IVADTGYGSEENYTYINDVLHKTPLITYASYRKENKKTYRNSPFMVDNWRYLEEDTYIFP THRAVPFKRYSRGKEKGGFVRDFKIYECENCRDCPVRSQCTKAKSEQNRQILVNNT >gi|237663594|gb|GG668924.1| GENE 157 139664 - 139876 105 70 aa, chain + ## HITS:1 COG:BH0682 KEGG:ns NR:ns ## COG: BH0682 COG3666 # Protein_GI_number: 15613245 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 9 67 458 516 522 65 54.0 2e-11 MTLFQAECKKKLLEEKTGSIYRKRKINIEPVFGHLKAHLVFQHFHLRGKQGAEIDIGLAL MELNLRKLGK >gi|237663594|gb|GG668924.1| GENE 158 140115 - 140345 354 76 aa, chain + ## HITS:1 COG:no KEGG:EF0599 NR:ns ## KEGG: EF0599 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 76 1 76 76 113 100.0 2e-24 MDKGVADIVKIKQVLKQESVKSLVEGTGLSKSTISSLKSGTRKVEKLNLSAAIKLTEYSD QVFRPIIEIWGEKPKK >gi|237663594|gb|GG668924.1| GENE 159 140482 - 141105 310 207 aa, chain - ## HITS:1 COG:no KEGG:EF0600 NR:ns ## KEGG: EF0600 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 207 1 207 207 282 100.0 8e-75 MSINKKDIKKEEIIFTAMKHFSKFGYEKTKLLDIANEAKTSTTTVYSFFKTKHDLYEAVI VYNLDIINSELEKIADKSSTIDEYIMNIIERVRLKSDKEQLLLNFYMLISTNSVQIKNLE IIEKFERKRFSYYLKFIENPKIKDRYTLLFIDNIITIYIYSYFNVFYRKKIFLYLSLYQQ DRESIEFEEDLMKYLKLLVKKRLLEIE >gi|237663594|gb|GG668924.1| GENE 160 141113 - 141757 504 214 aa, chain - ## HITS:1 COG:no KEGG:EF0601 NR:ns ## KEGG: EF0601 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 214 1 214 214 383 100.0 1e-105 MYKTATELFNRLKLEKKQLILCYILDEFGRVGYEATSVRKIASKADLSVGSLYQYFNNKE GMLTVAIEHVFVILDEYVSTINDAPLKLKDRLEIMFEMILKLGKQHPELIIFYNKIPSDK KMITEWVKQFYNNRSFFDVYWSTVKELQNEKEISTKIDPVIYTFIIDTMMLSGELLQNTQ YQEIKAKVFLEDSIKSSLILKENVLETLTVLAKG >gi|237663594|gb|GG668924.1| GENE 161 142276 - 142695 140 139 aa, chain - ## HITS:1 COG:SA1622 KEGG:ns NR:ns ## COG: SA1622 COG2801 # Protein_GI_number: 15927378 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Staphylococcus aureus N315 # 2 107 68 173 189 116 55.0 1e-26 MRKKDTALVKEAFGRIPYPLTDVKLFHADHGKKFDNQSIDDILNGFGITRSLSKKGFPYD NAVAESTYKFVKVEFVHQYQFKTLAQLRLELFDYVHWWNYLRLHGTLGMKHRYNFDNRDW QSEPLIMSSGLISLERQRN >gi|237663594|gb|GG668924.1| GENE 162 143264 - 143455 234 63 aa, chain - ## HITS:1 COG:BH0334 KEGG:ns NR:ns ## COG: BH0334 COG2963 # Protein_GI_number: 15612897 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 1 63 1 63 94 70 58.0 6e-13 MSRRQRRTYSKEFKQHVVDLYLAGKPRVEIIREHELTPSSFDKWVKQTHSTESFKKKDTL TPE >gi|237663594|gb|GG668924.1| GENE 163 143714 - 144181 262 155 aa, chain - ## HITS:1 COG:no KEGG:EF0603 NR:ns ## KEGG: EF0603 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 155 1 155 161 249 100.0 2e-65 MEIIDDQKFYQQMERLKQETFWKYLTHSHQFLYFIPLLCLIDFLFYPHFSWWFVLKLLLL VGSMFLYLYWIYNFYRRIDQKGMISFLFLKLFFMYDLCNSVVMMIIMTNFYQTFVKKIGF FYNLIGAVVLGIIVGCVYSGCSYERIKVYLGSKKK >gi|237663594|gb|GG668924.1| GENE 164 144561 - 145139 737 192 aa, chain - ## HITS:1 COG:SP1804 KEGG:ns NR:ns ## COG: SP1804 COG1302 # Protein_GI_number: 15901633 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 7 184 6 187 202 173 59.0 2e-43 MENKTNNTKTEIKKKDMSKTFETIKGELFFEDKVIQKIIGIALDEIDGLLTIDGGFFSNI AGKLVNTDNTTSGVDVEVGKKQVAVDLSIVAEYGKDVTTIYDKMKQVISNEVKKMTGLDV IEINVNVVDVKTKEQHENDSVTLQDHLSDAASATGEFASKQFEKSKEALGVASEKVSDGV QNVKEETEPRVK >gi|237663594|gb|GG668924.1| GENE 165 145194 - 145376 176 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227517565|ref|ZP_03947614.1| ## NR: gi|227517565|ref|ZP_03947614.1| hypothetical protein HMPREF0348_0548 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] predicted protein [Enterococcus faecalis D6] lipofamily protein [Enterococcus faecalis TX0855] lipofamily protein [Enterococcus faecalis TX0860] hypothetical protein HMPREF0348_0548 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] predicted protein [Enterococcus faecalis D6] lipofamily protein [Enterococcus faecalis TX0860] lipofamily protein [Enterococcus faecalis TX0855] lipofamily protein [Enterococcus faecalis TX2137] lipofamily protein [Enterococcus faecalis TX1341] lipofamily protein [Enterococcus faecalis TX0309B] lipofamily protein [Enterococcus faecalis TX0309A] # 1 60 1 60 60 78 100.0 2e-13 MVEFISKYKYPLIFGCLGLFLGILFFTLGFIKTVILTVLTLCGFYLGIYLETVGFFDKQN >gi|237663594|gb|GG668924.1| GENE 166 145386 - 145946 279 186 aa, chain - ## HITS:1 COG:no KEGG:EF0605 NR:ns ## KEGG: EF0605 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 186 1 186 186 256 100.0 3e-67 MRKRLKLLLILVLFFLFFPLAHTLITMQGVVSLPFYLLPFTNYPYIGNSMAQFLFWISGC LLTLLFIILIIVLFYPKAHNCIEKKTDSGKIAVQKKAIENFVLIAAKEEPFIVDPTVKSV IKKKKIKIYIQGKIRKAFQTGERQTAFIRKVNTNLNELFGAEQIILTEIIFKDYHEKNTK TKSKVL >gi|237663594|gb|GG668924.1| GENE 167 146664 - 147131 421 155 aa, chain - ## HITS:1 COG:SPy1531 KEGG:ns NR:ns ## COG: SPy1531 COG0783 # Protein_GI_number: 15675430 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Streptococcus pyogenes M1 GAS # 5 153 27 175 175 168 55.0 3e-42 MKFCETKKILNQLVADLSVFSVRIHQVHWYMRGGRFLTLHPKMDDLMEQINDQLDVISER LITLDGSPYSTLEEFFINSKLKEEKGSWNKTIDEQINYLLEGYSYLISIYEEGIEIAGKE GDDCTEDIFIGSKSELEKEIWMLKAELGNSPELDK >gi|237663594|gb|GG668924.1| GENE 168 147266 - 147799 433 177 aa, chain - ## HITS:1 COG:L69383 KEGG:ns NR:ns ## COG: L69383 COG1475 # Protein_GI_number: 15673430 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 7 164 8 170 180 187 55.0 1e-47 MNKIDMPVLNVKMVPVEKIKSNSYNPNHVAGPEMELLELSILKDGYTQPIVCYCDDKKDE YIIIDGFHRYLIGKSKLDLKELPVVVIDKPLEQRMSSTIRHNRARGKHEIDKMSELVLLL VNEGWDDHKIGKELGMEKEEVLRLKQVTGLKSAFLNHEFSESWDEFVKKNYPKQKDE >gi|237663594|gb|GG668924.1| GENE 169 147786 - 148211 217 141 aa, chain - ## HITS:1 COG:no KEGG:EF0608 NR:ns ## KEGG: EF0608 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 141 1 141 141 248 100.0 7e-65 MSKIDIKVYIPPYNKQNFYSLMGKYFAERVYRRKLPYLINTSSTIWFLLMNKERIIGFSS IQISNEFIDIGDVFVEDENDDTRKYLLEKVLFFIDKKCEKKCVRISLKKDQYLNNLKHYC FKQYRETKNYLFFRREINEQD >gi|237663594|gb|GG668924.1| GENE 170 148208 - 149479 545 423 aa, chain - ## HITS:1 COG:PA2127 KEGG:ns NR:ns ## COG: PA2127 COG3969 # Protein_GI_number: 15597323 # Func_class: R General function prediction only # Function: Predicted phosphoadenosine phosphosulfate sulfotransferase # Organism: Pseudomonas aeruginosa # 2 377 10 387 408 197 32.0 4e-50 MNVFDATLKRLEYIFEEFDKVYFSFSGGKDSGLMVQLANLVAEKLDRNFDLLILNIEANY TATVDFIKKIEQLPRVKNIYHFCLPFFEDNNTSFFQPQWKMWDPSEKEKWIHSLPKNAIT LENIDDGLKKYYSLSNGNPDRFLRYFQNWYKEQYPQSAISCGVGIRAQESLHRHSAVTKG ENKYKNRCWINITLEGNILFYPLFDWKVGDIWAATFKCELEYNYIYEKMYKIGYKYRDMR VCQPFGLQQRKALNQFAELEPETWDKLVKRVSGVNFGNIYGKTSLLGLNTSQKPSFMTWQ RYSIFLLETLGLYSPLLMNHYYRKICILFAYYKNTYNMDIQDMPDESKRKDWIKDERLWN DWKGIAKALEKNDFVLSTRNYSLTKKDEAELYEMFKEYKDFLGINQLKGKRYENIVQKIG GMK >gi|237663594|gb|GG668924.1| GENE 171 149933 - 150004 96 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSEIVESLVALKDSLSKTEYVDR >gi|237663594|gb|GG668924.1| GENE 172 150123 - 150233 78 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCIGFVGMGLFVSSESASAAEWYNPNMNVKKAICMG >gi|237663594|gb|GG668924.1| GENE 173 150450 - 150671 111 73 aa, chain - ## HITS:1 COG:no KEGG:EF0611 NR:ns ## KEGG: EF0611 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 73 59 131 131 125 97.0 6e-28 MEENGIDNDPHVQQKNIGRIHNVSQDITQTDHYLLFGEQKSNAVTRFLFIQLKINQKVQK IDAIKIYYVRSAY >gi|237663594|gb|GG668924.1| GENE 174 151944 - 152042 135 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFMTVSDHLKVLGFVPLSSRGKYQLYLLDLPP >gi|237663594|gb|GG668924.1| GENE 175 152352 - 152675 155 107 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 1 105 43 147 157 139 63.0 1e-33 MCEMKEVEIIEAHAMPDHIHMLVRIPPKLSVSGFMGFLKGRSAVIIHERHANLKYNYGNR SFWSKGYYVSTVGLNQKTIAKYIREQEAEDRVRDSINKREYKDPFRK >gi|237663594|gb|GG668924.1| GENE 176 152802 - 153782 1012 326 aa, chain - ## HITS:1 COG:MA3252 KEGG:ns NR:ns ## COG: MA3252 COG2423 # Protein_GI_number: 20092068 # Func_class: E Amino acid transport and metabolism # Function: Predicted ornithine cyclodeaminase, mu-crystallin homolog # Organism: Methanosarcina acetivorans str.C2A # 1 325 3 323 326 187 36.0 3e-47 MLFLKKEDIIKNFSMREAIDADKKALSLYSAGKAIVPLRTNIDVPKSNGQSLYMPAYVEG GEGALGVKIVSVYPKNIKKNLPSVPATMIVLDPETGMVSACLDGTYLTQLRTGAVQGAAT ELLAKKDAKIGALIGTGGQAQSQLEAMLTVRKLEEVRIFDIDFERANQFAEEMMQQFSVT MRPTKTSQECVEGADIITSVTTSKRATFSAEWVKKGAHINGVGAYTPEMCEIPREIIKAA DVVIFDTMDGVLKEAGDFISPLQDGYIQRDSYHGELGQLINEELVGRTSGEQITIFKTVG SAVLDVVVATEIVKKAKENNLGKLIY >gi|237663594|gb|GG668924.1| GENE 177 153795 - 154673 670 292 aa, chain - ## HITS:1 COG:no KEGG:EF0617 NR:ns ## KEGG: EF0617 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 292 1 292 292 493 100.0 1e-138 MIRNILLALIVAINLYFIIYFLRDLFKNKQNFKEEPGDMRLLPFTSFITFFLSTFGVSDF AIGTVLYPKLKWVSMKKLPGTLNTQCVVPVAVMALSYITAINVGIKTLAVCIICQIIGAY LGPRFVVKLPEKTIKLFVGIGLVIAAFLIFMGQMNWIPSNGTASELYGGKLILAGFLLFV YGALNNIGIGSYALTMVTVYLLGLNPVAAFPIMMGACTFSVPIGSVQFIKFDEYSRKITL FTSTFGVLGVLVAVFLVKSLDTYILKWIVILVLLYSAYTMLSSQLKKATAAN >gi|237663594|gb|GG668924.1| GENE 178 154688 - 155488 731 266 aa, chain - ## HITS:1 COG:BS_yrhO KEGG:ns NR:ns ## COG: BS_yrhO COG1378 # Protein_GI_number: 16079765 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 2 266 3 263 275 106 24.0 5e-23 METMIQIMKKYDFSEMETRVYTTLLEKGNLTGYEVSKISGVPRSKVYNILEKLLKKNLIV VNKSEPKLYHAISANEFLEKLEKSVKNDLSFLTKNLGMIKEKDEEDMLWKVDGIEYVLDK AEHLVKNAKESLLIQVWHENLTDSLLKALQQAEKKVDKFVLILFSSTHEYDLPLEKYYIH GFETDKLDDFGARWINIVADEQEVVFGTINEELQSTDVTWTKNHAMVNLAKEYVKHDAYT LKVIAESSEELKAKYGENFEGIRKIY >gi|237663594|gb|GG668924.1| GENE 179 155816 - 155911 90 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKKDIPYCPKPRNTFERDLFKYFEDKKDKT >gi|237663594|gb|GG668924.1| GENE 180 156472 - 156642 161 56 aa, chain + ## HITS:1 COG:no KEGG:EF0621 NR:ns ## KEGG: EF0621 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 56 1 56 56 87 98.0 1e-16 MPMLNQFIDYPLARTKDSIVRKQINPALYPNKLYGNRSWDTFYYYDNQLVYESSYY >gi|237663594|gb|GG668924.1| GENE 181 156701 - 156865 173 54 aa, chain + ## HITS:1 COG:no KEGG:EF0622 NR:ns ## KEGG: EF0622 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 54 1 54 54 91 100.0 1e-17 MKTITLYEILGEEGSDKYISVFKSLIASNFTENEDILSRCQLFIHNNVSAEENL >gi|237663594|gb|GG668924.1| GENE 182 156846 - 157202 245 118 aa, chain + ## HITS:1 COG:SP0325 KEGG:ns NR:ns ## COG: SP0325 COG3716 # Protein_GI_number: 15900257 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Streptococcus pneumoniae TIGR4 # 2 113 44 155 272 98 49.0 3e-21 MLKKIYKDEPEKLKETASANLEFYNTNPQMLTFITSMQLAMYDNDQSVSDTRSIKMALMG LLSGIGDSIARFGIASLFSTIFAGLAMNGLGFALMFFWLSMLISMLVIKLLMGGIFRV >gi|237663594|gb|GG668924.1| GENE 183 157216 - 157536 318 106 aa, chain + ## HITS:1 COG:SP0325 KEGG:ns NR:ns ## COG: SP0325 COG3716 # Protein_GI_number: 15900257 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Streptococcus pneumoniae TIGR4 # 1 106 165 272 272 84 43.0 7e-17 MIETLSDKIGKISSAANIGGVAVIAALNTSFVKANIAIKYSHNVESGEKQVIAIQDILDK ITPKMLPVILTILVFYLIKKRKWNTYQLLFFLFVIGILASDLGILA >gi|237663594|gb|GG668924.1| GENE 184 157666 - 157875 188 69 aa, chain + ## HITS:1 COG:no KEGG:EF0624 NR:ns ## KEGG: EF0624 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 69 20 88 88 119 100.0 5e-26 MNLQKIENYQLKFYQKDLLSGYLEKHSKLLEPLFERTYFLLKDQIIYNDAMDMEACSIPY SLKENTRNR >gi|237663594|gb|GG668924.1| GENE 185 158086 - 158292 68 68 aa, chain + ## HITS:1 COG:no KEGG:EF2268 NR:ns ## KEGG: EF2268 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 64 141 204 642 109 81.0 4e-23 MKSLTYISIADYKQLGIDKVLRNALLVNLEYLERSYIDKYRLSNWGVLVTGGMAAMDLFL PELVNRVN >gi|237663594|gb|GG668924.1| GENE 186 158355 - 158903 129 182 aa, chain + ## HITS:1 COG:no KEGG:EF0625 NR:ns ## KEGG: EF0625 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 182 47 228 228 353 98.0 2e-96 MYQYEVLMTYVYLLQISEYLEISLPLDLRTKLKIPILSTYYITDNQDVLNPINDSDHVNF RYVYDSYRNMKKELGKHCSQRNFFRGESSGLMFYKTEDIYFTLFNGLHGSSHGHASTGSF TLQLQGDDLISDSGCYSYVNKAEWLQPKECDSHNTMFIAENSHTLVLIHGATGNYQPHYF SE >gi|237663594|gb|GG668924.1| GENE 187 159271 - 159477 231 68 aa, chain + ## HITS:1 COG:no KEGG:EF0627 NR:ns ## KEGG: EF0627 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 68 17 84 84 131 95.0 1e-29 MISPLKDIQIMPVKVNQAGEDEPFYQAKGFCVITGEKKFYIFVICGDIVKGNKLLVSMVN FLWPTCFD >gi|237663594|gb|GG668924.1| GENE 188 159521 - 159937 425 138 aa, chain + ## HITS:1 COG:SP0321 KEGG:ns NR:ns ## COG: SP0321 COG2893 # Protein_GI_number: 15900253 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 1 100 1 102 144 58 37.0 3e-09 MNFLITGHSEFAIGMQSALTMIAGEIEDVMFIPFLANETTEEYRQKIESSIEMYEHVVCF TDLLVGTSFKKCIEFSMTKKQVFVISGTNIVMLLEGLMMRNSGIEPFELAKSVVKVGKSN IMLFEKNNEAEELSEEGI >gi|237663594|gb|GG668924.1| GENE 189 160933 - 161772 1134 279 aa, chain + ## HITS:1 COG:L132617 KEGG:ns NR:ns ## COG: L132617 COG0656 # Protein_GI_number: 15672315 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Lactococcus lactis # 11 279 3 272 272 348 67.0 5e-96 MITSLADTVTLNNGTKIPGMGLGVFQIPDEETAKVVEEGITNGYRLIDTAKIYGNESGTG AGIKAGLAAAGLNREDLFVTSKVWNAHISYDETIQAFNDSLERLGLDYLDLYLIHWPGNN SYKESWQALETLYAEGKVKAIGVSNFQVHHLEDLLSYAKVVPVINQVELHPKLDQKEVRD FCEKHDIKVQAWSPLMQGQLLSNETILAIAENHNKSAAQVILRWDIQQDILLAVKSVHKE RMISNAAVFDFELSAEEMAQINQLNESLRVGPDPDTFDF >gi|237663594|gb|GG668924.1| GENE 190 161795 - 162277 599 160 aa, chain + ## HITS:1 COG:no KEGG:EF0630 NR:ns ## KEGG: EF0630 # Name: not_defined # Def: glyoxalase family protein # Organism: E.faecalis # Pathway: not_defined # 1 160 1 160 160 311 98.0 5e-84 MSEAVKGFSVVNHVGITVSNLDESVKFYEALTGTKIANRDEIGGKRMAQTQGLDDTLIKY ANVHLENINIDLLEYVKPKSEKASYSNEQISAMHLCFEVEDIDAAVARLRAIGVEPDGEP ITFQEEDGLKSGFGTGVAYFTDPDGTNLELIAPKGPFTRN >gi|237663594|gb|GG668924.1| GENE 191 162443 - 163888 1190 481 aa, chain + ## HITS:1 COG:lin2646 KEGG:ns NR:ns ## COG: lin2646 COG1502 # Protein_GI_number: 16801708 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Listeria innocua # 13 481 15 482 482 455 47.0 1e-128 MILSVLTVIYFINAIIAGITILLKPRDVAAIWAWLLVLIALPVFGFFLYLFFGRGLTDKK KFYLQQSDLRELENFQNFQEESFELYSQKMPTEEQQQFTDFFSSLNRMPLTKKNDVEIFT DGTEKFNALMADIKKAQHSIHIEYYAFVTDHIGTKILNLLEEKAAEGVEVRLLYDAFGSK GTKVHHLNELKKNGGFVQTFITSQKALLKFRLNYHDHRKIVVIDGKVGYIGGFNVADQYA GTTKKFGYWRDTHLRIQGPAASLLQMRFLMDWNVSSPEKNRVAYQLDYFFKLEALVPEAN TSIQMIASGPNSDREQIKLAFIKLITSAKKRVWIQTPYLVPDDSVLAALKVAAASGVDVK IMIPDKPDHPFIYRATQYYGRLLMKENIEILIYNGGFLHAKTMIMDDEVCTVGSANQDIR SYKLNFEANAVLYDKKIIDQLEAIFLEDRKKCTTMTPEVVRDMSKWLIFKQQISRLFSPI L >gi|237663594|gb|GG668924.1| GENE 192 164586 - 165842 601 418 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 10 392 16 394 418 236 36 1e-60 MNIIDELAWRDAINQQTNEEGLRELTENTSISLYCGVDPTGDSMHIGHLIPFMMMKRFQL AGHHPYILIGGGTGTIGDPSGRTTERVLQTMEAVQHNVDSLSNQMKKLFGKDAEVTMVNN YDWLSELSLLDFLRDYGKNFNVNTMLAKDIVASRLESGISFTEFTYQILQSIDFYTLHKK HNIQLQIGGADQWGNITAGLDLIRKKEGPEAKVFGLTIPLMLKADGTKFGKTAGGAIWLD PKKTSPFEFYQFWLNQDDRDVIKYLKFFTFLDKEEIDALAEKVEKEPGKREAQRRLAEEV TRFVHDDAALEEAQKISEALFSGNIKDLTIEEIEQGLEHVPTVEITKDAKNIVDWLVDTE IEPSKRQAREDVSGGAISINGDRVTDLDFAVDPTQHFDGKFVVVRKGKKNYFLAKVMD >gi|237663594|gb|GG668924.1| GENE 193 166141 - 168003 2206 620 aa, chain + ## HITS:1 COG:VC1149 KEGG:ns NR:ns ## COG: VC1149 COG0076 # Protein_GI_number: 15641162 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Vibrio cholerae # 84 510 87 442 548 120 27.0 1e-26 MKNEKLAKGEMNLNALFIGDKAENGQLYKDLLIDLVDEHLGWRQNYMPQDMPVISSQERT SESYEKTVNHMKDVLNEISSRMRTHSVPWHTAGRYWGHMNSETLMPSLLAYNFAMLWNGN NVAYESSPATSQMEEEVGHEFAHLMSYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMK EVKPELVAGKSDWELLNMPTKEIMDLLESAEDEIDEIKAHSARSGKHLQAIGKWLVPQTK HYSWLKAADIIGIGLDQVIPVPVDHNYRMDINELEKIVRGLAEEQIPVLGVVGVVGSTEE GAVDSIDKIIALRDELMKDGIYYYVHVDAAYGGYGRAIFLDEDNNFIPYEDLQDVHEEYG VFKEKKEHISREVYDAYKAIELAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATY VFEKGADIPALLGAYILEGSKAGATAASVWAAHHVLPLNVAGYGKLIGASIEGSHHFYNF LNDLTFKVGDKEIEVHTLTHPDFNMVDYVFKEKGNDDLVAMNKLNHDVYDYASYVKGNIY NNEFITSHTDFAIPDYGNSPLKFVNSLGFSDEEWNRAGKVTVLRAAVMTPYMNDKEEFDV YAPKIQAALQEKLEQIYDVK >gi|237663594|gb|GG668924.1| GENE 194 168202 - 169620 1655 472 aa, chain + ## HITS:1 COG:BMEII0909 KEGG:ns NR:ns ## COG: BMEII0909 COG0531 # Protein_GI_number: 17989254 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Brucella melitensis # 5 464 20 484 510 175 26.0 2e-43 MDKQQVKKIELGTFIGLTMALCATVRSIPTLAAVGWTLISYTIFAVLFFAGPIALISGEL STMLPQEGGPQLWVKTALGSKWGFVVAWLLWVQMFPGMVMVASTLGPLLGNTFGNVHLGE NHWFVLGCILVIYWIITILNLKFDMAKVGGNIGVWLGVYIPVLVMFVLGLLSMIKVGLTP GGYLGAFSWSKVLPNLENMDTFKYLAGIAFIFVGIEMSSVYIPRLKDATKNYTKGVFISL IGLVLLNVINAMFVANIVPNGKMELSNITQPILLYCDVLGLPTIIGNIFSFMVFLGVLLQ LSAWVTGPSKTIIQVARDGLLPPKFGFHRENKYGVSRNVVLTQSVVISLFALLYGVMDDV NAVFLTLTNATTIIYSIVYVLIAISLIKLRKSQPDTLRPYRIGKKGNGLAYLVAAMLIFS VIIVIFATLGTTTVTDAVLVALITIVMFVIPLIINRFKKASWATEVKEDLGE >gi|237663594|gb|GG668924.1| GENE 195 169745 - 171151 1458 468 aa, chain + ## HITS:1 COG:NMA0715 KEGG:ns NR:ns ## COG: NMA0715 COG1757 # Protein_GI_number: 15793692 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Neisseria meningitidis Z2491 # 11 448 13 450 459 307 39.0 3e-83 MKSTKPTVSFAESLGILIALLAILGYLIIGQKLTPHIPILFVFMLLLLYGKWKGFSWDEI HEGIVEGIKPGIIPIIIFLLIGVLVATWILSGTIPTIMVYGFKIISVKFFLPTVFVVCAL VGVTVGSSFTTVSTMGIAFLGIGHILGFDNAMTAGAVVSGAFLGNNISPLSDTTNLAAGI GGVNLFEHILNMMYTVIPAFIISIVGYIFLGHQSGSADLQSVDAMVQTLHQGFWISPITL LPVAVLFLFAWKKVPAIPTLLVGSTVAVILAFINDHHLSLAKVSTILMSGYVADTGDQSI DTLLSRGGIESMLGSAALIILALGLGGLLIKFNIVATLIDKIKGYVNNPAKLIALTALSS VGINLLVGEQYLSIILPGETFKSSFTRLGIDKKYLTRTLADAGAAVNSLIPWGVSGTFIM GTLKVGALEYLPYAFFPLLCPIITVILGIFLKKQQGENKKAPGTNVEL >gi|237663594|gb|GG668924.1| GENE 196 171507 - 172424 1089 305 aa, chain + ## HITS:1 COG:no KEGG:EF0637 NR:ns ## KEGG: EF0637 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 305 1 305 305 445 98.0 1e-123 MKKIGLISSAFLLTLALAACGGGKSTENTDSRSSAAESTTVESTKASATKESSSKAATKS SDAKPSGTTTADSKATASSTKEVANNGSAEKQSPAKNANPDDQAKQVLNQLANMFPGQGL PQAILTSQTNNFLTAATTSQADQNNFRVLYYAEKEAIPVNDARVNQLTPISSFEKKTYGS DAEAKNAVNQIIDNGGQPVDLGYNITGYKQGAAGSSYLSWQEGNWSLVVRASNINGESPD DLAKNVVNILEQETLPAPNTVGQITLNVAGTTDYNRNSVVWQAGTVVYSVHHFDPIQAVK MATSI >gi|237663594|gb|GG668924.1| GENE 197 172476 - 172925 553 149 aa, chain - ## HITS:1 COG:STM2156 KEGG:ns NR:ns ## COG: STM2156 COG4808 # Protein_GI_number: 16765485 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 3 149 6 152 152 105 43.0 3e-23 MKKFLRVFLIFIGVFFLASCGSKIETKTFVGSPQDGIDSTLTYTYQGDKVLTQTAKNIVS YDKLGITKEEAKTALEPVSKQYEDIKGLNYKLTYEDKQAIEKLTINYEKLDYDKAKKVDG IQIDGDSSKGISMKKSQELVESQGYTEQK >gi|237663594|gb|GG668924.1| GENE 198 173065 - 173571 733 168 aa, chain - ## HITS:1 COG:lin2497 KEGG:ns NR:ns ## COG: lin2497 COG1267 # Protein_GI_number: 16801559 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Listeria innocua # 1 162 1 162 166 196 67.0 2e-50 MVIQGDTLENSARRLLQERGVTMNDLAELVLFLQKDYIDNLTLDTCLESIDAVLTKREVH NAIITGVQLDILAEENKLLSPLQEILTEDEGLYGIDEIMALSIVNVYGSIGFTNYGYIDK VKPGILKELNAHDGEHVHTFLDDIVGAIAAAAASRLAHSQPDLSDITK >gi|237663594|gb|GG668924.1| GENE 199 173703 - 174266 729 187 aa, chain - ## HITS:1 COG:L0018 KEGG:ns NR:ns ## COG: L0018 COG0039 # Protein_GI_number: 15672358 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Lactococcus lactis # 1 184 131 314 314 260 69.0 1e-69 MAWQASGLPVSRVIGTGTTLDTTRFRKELSQRLAIDPRNVHGYIIGEHGDSEVAVWSHTM IGTKPILEIVDTTERLTSDDLPIISDKVKNTAYEIIDRKQATYYGIGMSTARIVKAILNN EQAILPVSAYLDGQYGQQDVFTGIPAVVGNQGVTDIIELNLNASEKELFQKSVTQLKQVM ASLQPNA >gi|237663594|gb|GG668924.1| GENE 200 174588 - 174872 431 94 aa, chain - ## HITS:1 COG:L0018 KEGG:ns NR:ns ## COG: L0018 COG0039 # Protein_GI_number: 15672358 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Lactococcus lactis # 1 93 1 93 314 144 75.0 5e-35 MKVFNKKVAIIGTGFVGTSIAYSMINQGIANELILVDIDKAKSEGEAIDLLDGVSWGQEN VNVWAGDYQDCQDADIVVITAGANQKPGQSRLDS >gi|237663594|gb|GG668924.1| GENE 201 175040 - 175402 199 120 aa, chain + ## HITS:1 COG:no KEGG:EF0642 NR:ns ## KEGG: EF0642 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 120 1 120 120 209 98.0 4e-53 MTTTTVYYASNNEKQPNCFQLVIGSFSYELPKIEIYEILECVASAYGYQKEPFIEEQTEC FVKGNRCIHVSQQATTLTFVVNDLRLVMEKQCRNHEEVFQEVNHILLNIFEETPCVFLEK >gi|237663594|gb|GG668924.1| GENE 202 175418 - 175828 288 136 aa, chain + ## HITS:1 COG:no KEGG:EF0643 NR:ns ## KEGG: EF0643 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 136 1 136 136 208 98.0 5e-53 MKQVKITTTSDLINGGCNACPNVKCTNYLVHVEDETIALETLTVADLVTLLALKEGFRQK LVMEMFEEYTVFEREPHQVVFKEEETRILFQSKKQTIQSTLLCKEPQQVFQETQQILHQL FELEPFEFELVEETDK >gi|237663594|gb|GG668924.1| GENE 203 175875 - 176702 774 275 aa, chain - ## HITS:1 COG:L0220 KEGG:ns NR:ns ## COG: L0220 COG0583 # Protein_GI_number: 15672356 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Lactococcus lactis # 1 241 1 242 272 154 35.0 2e-37 MFEWIKTFIAVYETKNFSAAAKQLYISQPTVSLQIKKLEQHFSIKLFYRNGKQSVIPTKE ADFLYPKMLSIIESLTTSFAQAAEKENFKEDCIIASSNTVAIYLLPDIMESLVTAFPLIN FSIQLMNSNEVVDMVQNNHAHIGLIEKPIGTKNLHKEIVYEDQLVLAGDAASKFWLLREK NSGLRFFNELYLNEHSINLPIIELNNNEVLLQLLKNNIGQSIVSRLSISDEIPWQPIDQS FASRKIFIVQTDHHANTSFSEVYNRIVEKIRERQA >gi|237663594|gb|GG668924.1| GENE 204 176844 - 177413 518 189 aa, chain + ## HITS:1 COG:L181867 KEGG:ns NR:ns ## COG: L181867 COG1275 # Protein_GI_number: 15672360 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Lactococcus lactis # 8 175 9 176 324 157 55.0 7e-39 MVESAKKFLRKVPIPICGLILGMVSLGNLLYSLGYATIGTIYCVLGSLLMILVILKIIFT MKHALSTLDDPIIASVSPTFTMALMVICVFLDRIFTNAAWINVLWIGAVILHFILMIYFV AVHIFPTKIELEHIYPSWFITFVGIGVIPNTSQLFINELGKIVFLGSVVLLFTLVTNFNQ ENYEVERNA >gi|237663594|gb|GG668924.1| GENE 205 177406 - 177813 357 135 aa, chain + ## HITS:1 COG:L181867 KEGG:ns NR:ns ## COG: L181867 COG1275 # Protein_GI_number: 15672360 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Lactococcus lactis # 1 122 189 307 324 88 51.0 3e-18 MPESTIPLLTIMTAPGSLCLAGYISMGGHLYMPLVVFLLILSQCIYGIVVVNLYKIMQVT FYPSYAAFTFPLVISATALVKVKPLFAEKVGLTSLLNILSTFELLLAVAIVSYVFIRYCI FLFQRENNKKKVELN >gi|237663594|gb|GG668924.1| GENE 206 177836 - 178801 816 321 aa, chain + ## HITS:1 COG:L12335 KEGG:ns NR:ns ## COG: L12335 COG0451 # Protein_GI_number: 15672193 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Lactococcus lactis # 4 312 7 310 313 328 55.0 1e-89 MKKLLITGGAGFIGSNLANFYSQQYQVFVIDDLSMGRVSNLQQTEQLVFIKGSVTDQQLL DEVLSKHSFEYIFHLAAVASVASSVAQPLETHEVNFLSVLKILESIKKYQKKLKRFVFAS SAAVYGAEPTLPKRETSMICPLSPYAIDKFAAERYVLNEYHLHGVPTSAVRFFNVYGPNQ NPASPYSGVLSILMDRYIQLEQGQASQFQIFGDGQQTRDFIYIEDVLTALDLVATKSEAL GHVYNVGTEVAISLNQLIEEMNQLVGLSLPVSYQKERDGDIKYSLSDSSALKGLGFSPVY SIQEGLQKYLKFTHNTQNRSS >gi|237663594|gb|GG668924.1| GENE 207 179042 - 179356 334 104 aa, chain - ## HITS:1 COG:alr2106 KEGG:ns NR:ns ## COG: alr2106 COG1733 # Protein_GI_number: 17229598 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Nostoc sp. PCC 7120 # 9 97 15 103 110 95 48.0 2e-20 MTTDKQTSINLALSTINGKWKLSLMDELFQGTKRNGELMRALDGITQRVLTDRLREMEKD GLVHRESFNELPPRVEYTLTSEGYALYDALSSLCHWGETFAQAS >gi|237663594|gb|GG668924.1| GENE 208 179486 - 180103 891 205 aa, chain + ## HITS:1 COG:BS_yodC KEGG:ns NR:ns ## COG: BS_yodC COG0778 # Protein_GI_number: 16079013 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Bacillus subtilis # 5 204 6 202 202 131 38.0 7e-31 MMYQDVVRSRRSVRDFMPDVEIPKEELMAIIEEAMFAPNSTNLNSWRFLIVTEKEQKEAL YEVSMQQPAVKEAAAVIILLGDLTAYTVANADEISAKAVAQGTMTEEIRQGINENVSWYY DVSEEQKREWLMLDQGLVAMQLMLSAKDRGYDTVAMSGFETEVVRKLFNIEDHLVNGLII PIGKAQTPGFETVRRDVSEVVTWLD >gi|237663594|gb|GG668924.1| GENE 209 180291 - 181304 1107 337 aa, chain + ## HITS:1 COG:lin0931 KEGG:ns NR:ns ## COG: lin0931 COG0095 # Protein_GI_number: 16800002 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Listeria innocua # 9 335 10 330 331 305 48.0 8e-83 MRYVIMQSRDIRENLATEDYLLNTLSFEEPLVLFYIQEPCVILGRNQNAYEEIDLAYARE KGIVITRRLSGGGAVYDDLGNVSFSFVVQEGHQAFGDFKAFTKPIIEALHKMGATGAEIS GRNDLLIDGKKFSGNAMYTKKGKMYTHGTLMYDVDLAEVQRVLTVSKKKIESKGTKSVRG RVTNLRPYLDEKYQQLTIEEFRNRLLMELFDVESLTEVAEKEYVLTKADQQEIRKLVAEV YGNEAWIFGEAPKFTIKKEEKFKGGIVDARLTVEKGKIIELTIYGDYFAKKETAEIVAAL LGVDYQYSSIWQALAAFNFEDYFVNITKEEFVHLLVD >gi|237663594|gb|GG668924.1| GENE 210 181375 - 182223 843 282 aa, chain - ## HITS:1 COG:all0173 KEGG:ns NR:ns ## COG: all0173 COG0501 # Protein_GI_number: 17227669 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Nostoc sp. PCC 7120 # 20 243 4 228 291 58 24.0 1e-08 MCQPQEKKKEISVAKLRYRFEVPMIIIGFVLLFFALGLVALLILSDLPIPDWLLIVLIAP IAPVIAFFTIRYMYMDTASNGVEITENQLPEIYSLYIDLAKEMGFGTKKLRMPRLYLING NGVLNAFAAKCSLHRRYVVIHSDLLDIAYNTGDFSLIRFILAHELGHHKCGHTNLWRLML SIILKPVALDKSFTRTQEYTADRAGLYYAEEGALSMIYLFSGKYMGSRVDLEEYFHSIDL HDDTIWLKLSNFLSDHPVGFRRMQTLKKAKDTGNWDVHGKFF >gi|237663594|gb|GG668924.1| GENE 211 182412 - 182738 412 108 aa, chain - ## HITS:1 COG:no KEGG:EF0652 NR:ns ## KEGG: EF0652 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 108 1 108 108 169 98.0 3e-41 METVTVATKSDLLTNLNKQTDEIIISGALAQEIYHLKKQQLTETEEIGFLVGSQGAGSFL TYLIEKLSYINSELSPEEQKIEHAILRLYVIKKLTPETTLLRLKQLDY >gi|237663594|gb|GG668924.1| GENE 212 182869 - 183147 192 92 aa, chain + ## HITS:1 COG:no KEGG:EF0653 NR:ns ## KEGG: EF0653 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 92 1 92 92 168 98.0 6e-41 MNVIVEISDRLGMDYYFVSVTTTAKSLQLDSPKKYYKIWHQEIPYHQITEWHLTQQEDIQ EISFAWQETFYRFVDYGTGIVPYLTQFCKVMR >gi|237663594|gb|GG668924.1| GENE 213 183152 - 184087 939 311 aa, chain + ## HITS:1 COG:lin2880 KEGG:ns NR:ns ## COG: lin2880 COG1609 # Protein_GI_number: 16801940 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 1 305 1 316 318 248 40.0 1e-65 MTTIREIARLSGSSVTTVSRVINHHPYVSEEKRLKIQAIIDELGYKPNILARNLSFGKSN TLGVMVPYTNQPYFDAILSGIIHQAFQQGMMVSLLPTDYDKEVEKSYLEKMATGAFDGMI VLSKANPLSVFAPYKEQVVFCEKIEDPSYASIYIDRLTVYRRVFQALKQQGCSEVAITIN RAPEKSTSARYLVDAYQEIYGAIPENRLFKDCLTYEDGCEVGRHCGQDPTLQAVVTNGDE IAAGIQAVIERPLFLVGQEQTLLSEILNFSTICHPLMELGEKATHLFQEKRPKTIQLTST FINRQPDFSFS >gi|237663594|gb|GG668924.1| GENE 214 184258 - 184854 862 198 aa, chain + ## HITS:1 COG:BMEII0772 KEGG:ns NR:ns ## COG: BMEII0772 COG3560 # Protein_GI_number: 17989117 # Func_class: R General function prediction only # Function: Predicted oxidoreductase related to nitroreductase # Organism: Brucella melitensis # 6 197 7 198 199 231 56.0 8e-61 MSKFTEMMKNRRSIYALGENLPISKEEVTALVKEVVRESPTAFNSQTQRVVFLFGDAHKK LWAMTEDALKPLTPAEAFPNTQAKLQGFAAGAGTILFFEDTDIVKNLQDSFPLYADNFPV WSEQATGLTQANVWTALAQENIGANLQHYNPVIDEAVAAEWSIPANWNLRAQMVIGSIEA PAGEKEYMEDSARFKEFN >gi|237663594|gb|GG668924.1| GENE 215 184897 - 185742 1173 281 aa, chain + ## HITS:1 COG:lin0649 KEGG:ns NR:ns ## COG: lin0649 COG2514 # Protein_GI_number: 16799724 # Func_class: R General function prediction only # Function: Predicted ring-cleavage extradiol dioxygenase # Organism: Listeria innocua # 13 279 12 278 279 186 41.0 3e-47 MVQALPSNIGIQQVTLKVADLDKMVNFYTKTIGLKLLKQGEGRAWLAPQGTNDAILVLKE LTAGEENQGTTGLYHIAFLLPTRKDLGNMLLWLLQENVQIGAADHGYSEALYLSDPENNG IEIYWDKPEEVWDIRPNGEIIGVTEELDGDSLAAEADGHWLGISEGSKIGHIHLKVADLD TTETFYKNLGFGLKSNFGQQAKFFAAGQYHHHIGTNTWSGKQLPTIQENQFGLENYTFRL PTAADLEIVQANAEEAKLHFIAKDHLLALEDPSGMIIQFTY >gi|237663594|gb|GG668924.1| GENE 216 185872 - 186633 922 253 aa, chain + ## HITS:1 COG:L0153 KEGG:ns NR:ns ## COG: L0153 COG1349 # Protein_GI_number: 15673279 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Lactococcus lactis # 1 253 1 253 253 243 51.0 3e-64 MLIEERLAKIQKIVNEQKSISMEALAEQVSVSKDTIRRDLIRLEKEGHLKRTHGGAISVQ SEATIYDYAQRIMKHPEKKQAIAQKVWANIPKQASIFFDSSTTVEAAIRAMENSPIHAIT NSLSHALLLAQMDQTKITVLPGQLHKQQLFLFGAETVAKVGEFAPDYTLLGVFALSEQGL FIHTEEEGQVKRRMIQQGKQVIALADQTKLNKTGLFKICELTEIDCLVTDTRPDEKFCEQ LAQAGVTLIVADE >gi|237663594|gb|GG668924.1| GENE 217 186646 - 188046 1434 466 aa, chain + ## HITS:1 COG:no KEGG:EF0658 NR:ns ## KEGG: EF0658 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 466 1 466 466 928 98.0 0 MKRKINYTHIAEPTVFENVFPTYLTNETMMARKQKVLQRMKTEKFDQLVFYADKEHGSNF EYLTGFIPRFEEGLLVLNKDGAATLILGNENLKLCQHARISADLIHYPAFSLPNQPMAGE QKLSQIFETLLDETAQKIGIVGWKMFTTQQQEPATMFDVPHFIVEALKKALPKEARLLNG THLLIGAKGARTTNNANELAHYEYGANLASRSMLKALNAIEVGQRETDIGALLNDEGQTP TVVTIAATGQRFEYANMYPTAKEIQLGDALSLTTGYKGGLSSRTGFVIENEQQLPEAQRD YLERVAKPYFQAVVHWLETIRIGLLGREMYQAIEEQLPKEIYHWHLNPGHLVSDDEWMSS PIYPDSAIRLESGMLFQVDIIPSVPGYTGVSAEECVALADETLQKEIRQTYPDMWQRIAT RRAYLKETLKIDLPSEVLPMSNLVGYLRPFYLAKDKALCVEKPALK >gi|237663594|gb|GG668924.1| GENE 218 188134 - 188784 731 216 aa, chain + ## HITS:1 COG:CAC0219 KEGG:ns NR:ns ## COG: CAC0219 COG1573 # Protein_GI_number: 15893511 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Clostridium acetobutylicum # 22 203 25 188 199 113 34.0 3e-25 MHYPEHLKKAVLAKAKDLPLEGFVEGQGPQQPKVMLIGEAPGKEEIKENVPFIGRSGQLL MEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVTKFPNRTPTKEEIKIFAPLLD WEIAVCQPELILTLGNIGLQRLLGPKPTITAVHGTVIQSPIQTFDEQSQNYHWTQKTYQI IPLFHPAAVFYNYRLKEVVKEDWQVVQKQLQLLKKV >gi|237663594|gb|GG668924.1| GENE 219 188959 - 190299 1171 446 aa, chain + ## HITS:1 COG:lin2192 KEGG:ns NR:ns ## COG: lin2192 COG0534 # Protein_GI_number: 16801257 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Listeria innocua # 1 441 5 443 443 176 27.0 7e-44 MEQTQQNHFTALFYKNVLLGILSMAAQSIFILADTFFIANGIGTEALAGLNIVLPLVNII NGLGWMFGVGGATLFSTTVAQKEIKKANQYFSLTIGLVFVIGSLFTLASLIFSDQIIRGL QGTGVLFGLAKEYYMIYLSCSLLFILNNCLITFLRNDHNPRLATIAFVSGGIVNIILDYV FIYQFGWGMAGAAIATVMSPLTSLILITLHKWSPQRVLRFEKFKVKFQDVREIMSIGFSS FLNEFSSAFVMFLFNIVLLNLVGHVAISAYAIVANLNIIVIAIFTGIGQGAQPLLSRYYG LGETKVLRKFVKLSFITYLVAGFLFFLISQVFTGQIIEVFNSEGNDQLAQIARTAIRLYA ISFLFTGLNFMGIYYFSAVRKPKMALMISSLRGFFLIVPVLFILVKLLGLTGVWLAMPVV EFVTFGLMLVGYLAYRNYLKKREAVT >gi|237663594|gb|GG668924.1| GENE 220 190324 - 192132 2116 602 aa, chain - ## HITS:1 COG:lin1528 KEGG:ns NR:ns ## COG: lin1528 COG1164 # Protein_GI_number: 16800596 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Listeria innocua # 3 601 5 601 602 577 49.0 1e-164 MTYSITWDLDSIFPNGSESKELSQRMTQLTEQTKEYHQLITEWTPESAQGKEQFAEILTL QGKISNGFSQCNSFLTALISANTNDTKAKILSGDLYNLLPAIQLAETIFTKKITEISAEH WQALLAEEPFKTMAFRLNELRRDGKKLLSEQEENIINTLSLDGLNAWSTHYDTIVASIVI PFEEKDGSVTELSAGQAFNRMMGDPDKEVRQRLFTAWEKAWSSKASILADTLNHLDGFRL SDYKLHGTTDYLENPLNYNRMSQETLTVMWETIQKNKQPFVDFLTRKAQLFGKEKMDWQD QDAPIILGDLEEKTYSFDQAAAFILENFRKFSPKMADFAQMAFEKSWIEAEDRPGKRPGG YCTELPETQESRIFMTFGNSINEVATLAHELGHAFHSSVMWDLPSLNREYAMNVAETAST FAELIVADATLKEAKSNVEKINLLDTKMQNAIAMFMNIHARFIFENNFYQARQKGLVAEE DITELMLAAQKESYKDSLGSYHPHFWASKLHFFIDDVPFYNFPYTFGYLFSMGIYAYANQ QGSSFEDQYIALLRDTASMTSEELAKKHLNVDLTKPDFWQAGIDQVLKDVEQFMTLTENY VN >gi|237663594|gb|GG668924.1| GENE 221 192278 - 192787 288 169 aa, chain + ## HITS:1 COG:no KEGG:EF0662 NR:ns ## KEGG: EF0662 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 169 1 169 169 319 98.0 3e-86 MKNYLKDSNLYLVIAFVIMAILFFSSSQTYEQQSQVGLLDKLLSSHPFEEQLKNISFQYA GSEVSIQASGYSKFVEFFIRKGAHFGTYFLLGGSWFIGLVPRIKGLFLTAVVSWLAATGY AGLDEFHQMITGGRTPLFQDVMLDAMGALTAIVICLVVHGLKKNKKRRR >gi|237663594|gb|GG668924.1| GENE 222 192917 - 193645 1027 242 aa, chain + ## HITS:1 COG:lin1570 KEGG:ns NR:ns ## COG: lin1570 COG0217 # Protein_GI_number: 16800638 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 240 1 239 241 298 62.0 7e-81 MSGHSKWSNIQGRKNAQDAKRGKIFQKVSREIYMAAKAGGPDPAMNPALRLAVDKAKSAN MPNDNIARAIKKASSAGEGEHYDEVTYEGYGPGGVAVLVHALTDNRNRTATNVRVAFTRN GGSLGETGSVNYMFDRKGYIVIKREDHAIEEDDMLEVVLEAGGEDLETSPEVFEIYTAPE DFTAVRDALEQAGYSLAQAELTMVPQTLLTLNDEQKAQLERLVDKLEDDDDVSEVFTSAE NL >gi|237663594|gb|GG668924.1| GENE 223 193698 - 194168 438 156 aa, chain + ## HITS:1 COG:no KEGG:EF0664 NR:ns ## KEGG: EF0664 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 156 1 156 156 293 99.0 1e-78 MEGILKKRICLQAIREEAEAYYRNGDFYCSEAIVATIRQHFDAEIPIEAVAMASGFPVGV GGAKCICGALSGGVMCLGYFFGRTEAKGEQVNKTMALANELHQSFRQKHRVVCCSILTSK MMMGSPEHMEQCIGFTGEIAETTAKIIARELAYELV >gi|237663594|gb|GG668924.1| GENE 224 194244 - 194417 316 57 aa, chain - ## HITS:1 COG:no KEGG:EF0665 NR:ns ## KEGG: EF0665 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 57 1 57 57 73 100.0 3e-12 MLSKEEVLHLLNEAKKEVDRLETNRQEDLGNSINYIENELQLQRVLSQVEAYEKVLG >gi|237663594|gb|GG668924.1| GENE 225 194530 - 195504 1047 324 aa, chain - ## HITS:1 COG:BS_ykcA KEGG:ns NR:ns ## COG: BS_ykcA COG0346 # Protein_GI_number: 16078352 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Bacillus subtilis # 5 318 6 312 316 181 37.0 1e-45 MYAQIHHISILNRLIKPTFDFYHNTLGLKLLMKTINQDDHTMYHLFFSDNEQRTGTELTF FELNDGQDQSFGTNTIERTILKVPTRASLDFWAERLEQAGICHYGVETFNQHPILRFEAP DNTQMALVPLREFENAEDYFPAEHAEIPVEHAILGIDAIQLRVQYAAATKQPLVDYLHWH EKETVPFFETAHEVTVLENHHPQFYQEVHIIDDRTNPLAIEGIGGVHHVAFGVEDTQELT QVDSLLDEKNFTNSGIKDREFFKSLYFREPNHLLFEVATQKGLLDAEAYENQSSNFDEIP LYLPHFLADQRERIEAILAQQRHE >gi|237663594|gb|GG668924.1| GENE 226 195535 - 196107 654 190 aa, chain + ## HITS:1 COG:BS_yodD KEGG:ns NR:ns ## COG: BS_yodD COG0400 # Protein_GI_number: 16079014 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Bacillus subtilis # 1 188 1 193 200 62 28.0 5e-10 MKQFFQKGSKPNQLVVAFHGTGGNEYQLLTTIATLYPEASVLSYLGTEGVGEQRRFFAPL VNGALPRANFDERVTAFLEEVWQPQKLYDEVIFIGYSNGANFILGLLEKNPTIANTVILL HPSNLGYQYVSGEFATKVIVTTGAQDELSIPGQVLSLANQLKKHFPVDFLLVDGGHGLSE EEVTKIKEVL >gi|237663594|gb|GG668924.1| GENE 227 196173 - 197699 1622 508 aa, chain - ## HITS:1 COG:SPy0388 KEGG:ns NR:ns ## COG: SPy0388 COG0769 # Protein_GI_number: 15674533 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Streptococcus pyogenes M1 GAS # 3 504 2 481 481 457 50.0 1e-128 MTISLFAIRDCLEKEDLLKEFISPEGWHLTLSDTLGQREVTALSYDSRDVTAETLFFCKG LNFKEIYLENAVKDGLEIYVSEVPYEVPAQLGIIVTDIKKAMAVLSMAFYDYPQNKLKLI GFTGTKGKTTAAYFTKYILDVATQQKTALLSTMNSTLDGKTFFKSALTTPESLDLYRMMA TAVANGMTHFIMEVSSQAYKTNRVYKLFFDVGIFLNITPDHISPIEHPTFDDYFYCKRQL ITHSKVIVLNHEADYFPLLKETAQQQKVPAIVYGSQPAPEVDYSFAVSSEDSLRFIVESP ADALGLAGSYHLRLGGDFNKGNALSAAIASVLVGASKEECQQGIAATTVPGRMESLTNTN GATVYVDYAHNYDSLKNLLTFVREEHPDGRLIVLVGSTGDKAISRRKDFGRVLSELADVA VLTTDDPASEDPAKICQEIQAHITKEMPVYTVLDRGEAIAHALSLSTTADDAIVLAGKGA DLYQKVNGVDEPYAGDFALAEAFINKKN >gi|237663594|gb|GG668924.1| GENE 228 197903 - 199552 1600 549 aa, chain + ## HITS:1 COG:SP1529 KEGG:ns NR:ns ## COG: SP1529 COG2244 # Protein_GI_number: 15901374 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Streptococcus pneumoniae TIGR4 # 19 548 1 528 529 447 47.0 1e-125 MINQPNSVDQPILTNQEKMVKGSAWMTASNIISRMLGAIYIIPWYAWMGEHGNEANSLFS MGYTIYALFLMISTAGIPGAIAKQTSHYNSLNEYKISRQLFYRALQLMGGLGVVFAIVMY LASPALAALSGGGPELVPTMRSLSLAVLVFPSMSVIRGYFQGNQEMMPFALSQIVEQVAR VFYMLLTAFIIMKVFEGNYVTAVTQATFAAFIGMLASFAVLGYYMYKQKPLFDYLEEHSA NEHEIAPKELLIETFKEAIPFIVVGSGVTVFKLVDQFTFSNFMRLFTDYSDTQLRELFGI FNANPDKLTMIVVALATSISATGLPLITEAVTLKNHRELARLISNNLQLFVFVMLPATFG MIVLAQPLYTVFYMPDALGTSLLVQACYASLFLGLYMLVSNMLMGMYENRDAMRYLGIGL AVKLIVQFPAIRLFEVYGPLLATMIGFTVSCVLILRRIRQVTRFNYKLTLRRTLLMFCIT VIMMIIALIFRQFLYLFLDPTRRFQAFIIVVIVAAAGGAFYGYSVLKIRLADRLLGKNAA KLRAKFNIK >gi|237663594|gb|GG668924.1| GENE 229 199661 - 200395 1007 244 aa, chain + ## HITS:1 COG:lin2436 KEGG:ns NR:ns ## COG: lin2436 COG1187 # Protein_GI_number: 16801498 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Listeria innocua # 1 239 1 233 233 270 60.0 2e-72 MRLDKFLADVGIGSRKEIKQLLKKKVVTVNGDVVKEAKTQVNEETDQIALMGEILTYQKF FYYMLHKPQGVISATEDQRDETVIDLLTDQDYRADLFPVGRLDKDTEGLLLLTNDGQLAH QLLSPKKHVDKEYLAEVEGLVTAEDCQLFAQGFALKDGEMVKPSRLVIETINEEEGTSVV RLVIQEGKFHQVKRMLATVGKPVTYLKRLRMGELWLDETLELGEYRPLTEAELQQLQPKQ SYLN >gi|237663594|gb|GG668924.1| GENE 230 200529 - 201944 2018 471 aa, chain + ## HITS:1 COG:SPy1070 KEGG:ns NR:ns ## COG: SPy1070 COG0624 # Protein_GI_number: 15675062 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Streptococcus pyogenes M1 GAS # 2 471 3 469 469 551 58.0 1e-156 MTIDWTKEVEARKDDLLEDLQNLLRINSERDDAQATPEAPFGPGPVAGLKHMLAYGERDG FTVKNVDNYAGHIEYGEGDETLGIFGHMDVVPAGDGWETDPYEPVIKDGKIYARGASDDK GPSMAAYYAMKIIKELGLPVSKKIRFVVGSDEESGWGDMDYYFQHEEAPDFGFSPDAEFP IINGEKGNVTIRLTFRGGNGADYKLESFKSGLRENMVPGTADAVVTAASADEAASLAASF ETFIKQEAKISGNAELSDKTVTFHVVGKGAHGASPQSGINAATFLATFLNDYSFAEGAYS FINTIAEFIHEDFYGEKLGVAFEDEKMGKLTMNAGIVNFDPENPENSLVTLNFRYPKGTS AEELQAKVQATVGETVTATQGDRNQEPHYVPVDDPLVATLLQVYEDHTGEKGQEQIIGGG TYGRLLKRGVAYGAMFPGYTDTMHQANEFMELDDLFRAAAIYADAIYRLAK >gi|237663594|gb|GG668924.1| GENE 231 202088 - 202321 421 77 aa, chain + ## HITS:1 COG:no KEGG:EF0672 NR:ns ## KEGG: EF0672 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 77 1 77 77 132 100.0 5e-30 MSETLIVNYLIKGRVKMNVEELVQKAKDLIGEGNVEHAQQFIEEHKDELGEHYHKITAML ADTTTDGLFDKIKGLFQ >gi|237663594|gb|GG668924.1| GENE 232 202604 - 203623 731 339 aa, chain - ## HITS:1 COG:lin0994 KEGG:ns NR:ns ## COG: lin0994 COG3594 # Protein_GI_number: 16800063 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose 4-O-acetylase and related acetyltransferases # Organism: Listeria innocua # 5 286 7 288 343 103 30.0 4e-22 MENDKRIYKWDNVKLFLIFLVIFGHILDREASPSRLMETINFWIYSFHMPAFIFVSGLFS KHAIKQRKYLRLLSFVWLYLLAKLLITLANFAFANKMNFDLLNETGVPWYLLSLASFYLI TIFLQRVQPKIMLPIIVVIGCASGYLPVEGFLSLGRTLGFFPFFYCGYLMDIQKLQIFLD HRKVKWAAIGVILSSFLFVNSQWSLATKFWGFLTGWASYAEISPAFEYSSFIQLFFYVAA ALVSLSWFALLPKRKLPLSALGKDTLYPYLLHMPLIILLESGLQLDTLFKEWFTFRILAL FFLALFILAITNMPVVKRGADYLFNPIAYVLPKQWLKVK >gi|237663594|gb|GG668924.1| GENE 233 203859 - 204812 1050 317 aa, chain + ## HITS:1 COG:lin1460 KEGG:ns NR:ns ## COG: lin1460 COG1125 # Protein_GI_number: 16800528 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, ATPase components # Organism: Listeria innocua # 1 314 1 322 327 303 50.0 3e-82 MIKFQNVSKVYKENAVLSDVNLTIQQGEFFVLVGPSGSGKTTTLKMINRLIEPTTGEVAL NEQAVTNYPLRELRLKIGYVLQQIALFPNLTVAENIELIPEMKKWPKEQRRERTIELLKK VQLDPEEYLHRKPAALSGGEQQRIGILRAIAAEPEVILMDEPFSALDPISRHHLQRLVKE LHQELASTIVFVTHDMTEALLLGERICIMDAGKIIQVDTPEAIQKHPKNNFVGQFFKQSS PELANYCGADLTAFLEAADETIEPVPTVFMETNLKEIVQLINAQEKANLVEKQQVLGCIT SKTITRFMEQLLESEEQ >gi|237663594|gb|GG668924.1| GENE 234 204813 - 206330 1563 505 aa, chain + ## HITS:1 COG:SP1860_2 KEGG:ns NR:ns ## COG: SP1860_2 COG1732 # Protein_GI_number: 15901688 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Streptococcus pneumoniae TIGR4 # 212 505 5 298 299 339 58.0 7e-93 MQALIETFFARKEEYLQALIEHMQLSFISLLFAALIAIPLAIYLTSHRKLAESLLQVTGI FQTIPSLALLGLLIPLIGIGRPPAIVALVIYALFPILQNTYTGLTEIDPSLEEAAEAFGM SKKEKLFKFELQMALPFIISGIRTATVLIIGTATLAALIGAGGLGTFILLGIDRNNLSLI FIGALSSAALAVLFNYGIHWLEKANGRRLIIGGTILGLLLGGSFFWNQQTSSKEKQLTIA GKLGAEPDIIINMYKALIEENSDIQVTLKPNFGKTTFLYNALKSDEIDLYPEFTGTVIET FLKNPPQLDNQPQVVYEAARAGLKKQENLTLLKPMRYENTYAVAVKRSFAKAHQLKTISD LQKISNQLRAGFTLEFIDRQDGYKGLQEKYHLNLNVQSMEPALRYQAINNGEVNVIDAYS TDSELRQYDLVTLEDDQALFPPYQGAPLIKTATLEKYPELAEILNKLAGKISEEEMSEMN YQVNVEGQDPSIVAKDYLKEKNLLK >gi|237663594|gb|GG668924.1| GENE 235 206472 - 206927 714 151 aa, chain + ## HITS:1 COG:lin1404 KEGG:ns NR:ns ## COG: lin1404 COG1438 # Protein_GI_number: 16800472 # Func_class: K Transcription # Function: Arginine repressor # Organism: Listeria innocua # 1 150 1 149 149 107 38.0 9e-24 MKKAERQRLIKQLIMQQEIETQDELITRLEELGVRATQATVSRDIREMSIVKTHGADGRV KYAIFSQAQGTSSEEKLRESVKDSVVRMERVQFIVILHTEMGNADVVSNFLDEVAYPEVA GTVAGADTIIVITRSEEDAEHFIERIENMIF >gi|237663594|gb|GG668924.1| GENE 236 206961 - 208481 1462 506 aa, chain + ## HITS:1 COG:lin1985 KEGG:ns NR:ns ## COG: lin1985 COG1109 # Protein_GI_number: 16801051 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Listeria innocua # 4 489 9 495 503 538 56.0 1e-153 MVELKALQNGSDIRGIALDTEEQTATLTVTAVAEIAVGVVRWLQDKKQLPRKAQQRLTIA IGHDSRLTAEPIKQALVDTFLSLGIQVIDVGLATTPAMFMATQFPTLQCDAAIMITASHL PYYFNGLKFFTAEGGAEKEDIRYILSHTDPLTANENGTLMKQELLPIYAEHLVAKIRQGI HSPEEKPLQGFRIIVDAGNGAGGFFAEQVLQVLGADTTGSQFLEPDGHFPNHVPNPDNSE AMRSIQTAVLANQADLGIIFDTDVDRSAVVDQSGEVLNRNNLIAVLAAIVLKEAPGSYIV TNSPTSSHLKTFIEEKGGQQIRYISGYRNVINKMIELNHGGFQTPLAIETSGHAAFQENY NLDDGAYVVAKILMLLPELKQNNQTLGDLIATLKQPAETNEFRFKITEENVTCYGQQVLR DFELFVENQADFAVDRENQEGVRGNVSGQYGSGWFLLRLSLHEPLLVLQVENDQSDKNAC VIEKIATFLQKYEEIDSQQIENNLGN >gi|237663594|gb|GG668924.1| GENE 237 208492 - 208821 191 109 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116334854|ref|YP_796381.1| acetyltransferase [Lactobacillus brevis ATCC 367] # 1 96 1 96 177 78 39 4e-13 MENVLKGKHVGFSHFREEYIEHITKQQWDNELLQHLSWDALHPWGLEEWKDFTINKGEDD RFLFAILENTTEEFIGWVSLSDVQLKNRGANLGIAILQKEWLQMIKAES >gi|237663594|gb|GG668924.1| GENE 238 208945 - 209808 535 287 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 3 280 5 276 285 210 44 5e-53 MEYSMRLPENFSTMTVKELLENEWLVPRKVRHFLRTRKNVKINGETTAFHFPVQAGDCVT LTFEETDYVRPTIHLGEATRVKVLYEDEHLMIVNKPYGIKTHPNQPQETNTLLNHVAAYL AEKNQVPYVVHRLDKETSGAIVFAKNPFVLPILGRLLETKQIYRQYQAIAAGHFNQKEQT INQPIGRDRHDRRKRRIDPQKGDSAITHVKVVKALSNNQTAVTCVLETGRTHQIRVHLAS EGHPIIGDPLYNPKSQAARLMLHASQLHLLHPFTKKQIVVTAAPGLW >gi|237663594|gb|GG668924.1| GENE 239 210151 - 212337 2545 728 aa, chain + ## HITS:1 COG:SPy2059 KEGG:ns NR:ns ## COG: SPy2059 COG0744 # Protein_GI_number: 15675827 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Streptococcus pyogenes M1 GAS # 34 722 93 777 778 617 49.0 1e-176 MDNLKQFFSKVGVGLRHFWTWIKPYLIQFHQARKRIWKKYQINKIFLLIGLVVALGASIY LFYLAKSANVETLKSGLSESTRVYDESGEEVGKLFGQKGTFVELDNISPYIQDAVISTED RAFYQHKGYSIKGIARAVVGKLTFGKIGGGGGGSTITQQLAKNAYLTQEQTLDRKARELF LAIEIEKKYSKKDILAMYLNNSYFGNGVWGVQDAARKYFGVDASQVTVGEAATLAGMLKG PGIYNPIDYIDNATARRNTVLQLMVDNKKLSQEEANQEASVNLASLLNDTYVGDENSYKY PYYFDAVIDEAVNRYKFKEEDILNKGYKIYTSLNQKYQDAMDATYKNDALFPPNAEDGAM VQSGSVAIDPKTGGVQALVGGRGEHVYRGFNFATQTKRSPGSSLKPISVYTPALEAGYKP DSVLEDKPQDYYPAQNYSRTYSGEVPMYQALGESLNLPAVWLLHQIGLDKGYEKTEKFGI PLSEKDRYYGLALGGLQTGVSPLTMAGAYSAFANEGYKTETHLITKIVDSTGAIVVDNTK VKKEQVITKDVADGITSMLLGVFSSGSGVNAQPAGYVMAGKTGTTETNFDSSKTNDQWVI GYTPEVVIATWLGFQETSKTHYLEGSSATYASQVFNSQASGILPQVKQAQFPVADAYATG GKVVDSNDSLTGGANSNWRDNLKDFGNSVQDGASNFGDTLNEVGGQIKDGAKKVKDKIEG IFGGLLGN >gi|237663594|gb|GG668924.1| GENE 240 212400 - 212741 578 113 aa, chain + ## HITS:1 COG:lin2326 KEGG:ns NR:ns ## COG: lin2326 COG3679 # Protein_GI_number: 16801390 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 3 112 4 113 117 87 50.0 5e-18 MSNIYDTANQIERELRELDEFKALQAAYEEVKADEAAYTLFKEFQGFQQGLQEKQMRGEE FTDEDAEKAQSIATKVQETAVINELMQKEQAFSLVVNDLNRIIMTPVRDMYND >gi|237663594|gb|GG668924.1| GENE 241 212810 - 213268 470 152 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227517644|ref|ZP_03947693.1| ## NR: gi|227517644|ref|ZP_03947693.1| hypothetical protein HMPREF0348_0627 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis Merz96] DNA binding domain, excisionase family protein [Enterococcus faecalis R712] DNA binding domain, excisionase family protein [Enterococcus faecalis S613] DNA binding domain, excisionase family [Enterococcus faecalis DAPTO 512] DNA binding domain, excisionase family [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF0348_0627 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis Merz96] DNA binding domain, excisionase family protein [Enterococcus faecalis R712] DNA binding domain, excisionase family protein [Enterococcus faecalis S613] DNA binding domain, excisionase family [Enterococcus faecalis DAPTO 512] DNA binding domain, excisionase family [Enterococcus faecalis DAPTO 516] # 1 152 1 152 152 282 100.0 6e-75 MLSVEQLAQELNVTTRTIRNYLKEGKIKGTKIGGQWRFSERDIYDFLGKSDDIIVKNTAI ESYVKDVPQNNEGLVTLTFSLNTESDIEFVKNKILKHFNSVYGSNQQNKSFEYQLLPRNL VRITLIGPHAYILNFGNWLTNFIELSIQNYQE >gi|237663594|gb|GG668924.1| GENE 242 213284 - 214846 967 520 aa, chain - ## HITS:1 COG:SSO3012 KEGG:ns NR:ns ## COG: SSO3012 COG1132 # Protein_GI_number: 15899719 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Sulfolobus solfataricus # 4 518 126 657 863 127 22.0 4e-29 MEKIMKKNKKFVFLVSLTAIVTTLTSLIAPIIIQYLTNKKNLNSQAMIYIFLAMLLSLVI QLVIMVYKENFAARFNSNYLFTLINKMIHLKYDSYITLEPTYLINRIFSAVDALYLFLIS SFSVTIKSIFTILLSLLMVSYLSIEIVLFMVLLIPLNYFGFKYINKKLKVRMENMQKNAA VANKNLISTLSNQDAVKAGISAEILENLLYEKINLMYQSVASTNKFAQSTSSIVSFINQS FQTFVYIRTSMLIAADTLPISSLIILSILLPLFFSSLSELSKVTIDLNTLTTANTFIKDS LDKNIERDGDIDIGAIVSIQLFFPTFEIDGNQFQYRIQENLQNGDRVYLTGKSGSGKSSL LKLLLKFRESSGIMINDLPINAINNKSLRNKIAYLAQEPTILTETLEKNIGMGTPLSYEQ KQLILNTGILNPILKTKDWETVLTENGNNLSGGEKQRIAVARLILADADVYILDESTSNI DEESSQAIFETLLECVKDKIFIFTSHDKKNSQYANKIINI >gi|237663594|gb|GG668924.1| GENE 243 215031 - 215120 256 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKFNKPELKKIGKTIQLGCMCGILVGTGT >gi|237663594|gb|GG668924.1| GENE 244 215276 - 216508 624 410 aa, chain + ## HITS:1 COG:MT0720 KEGG:ns NR:ns ## COG: MT0720 COG0535 # Protein_GI_number: 15840098 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 71 373 7 330 391 97 27.0 5e-20 MLKFYFYRNKVIVHNPIISSWIGIEENELPILEKYLKTRDRHDISKDLLRKIELYRIFDF TDLEVEENFHKLIENFSIPRTVYIVVTEECNLKCTYCYAEAGPGKKLRRELDYEEYDKIF KQLKVAGVKKIVFTGGEVGLKKNFYKILDNAYKKGFICNLISNGRVAYNIKQAKFLSERC YKITISLDSLNENNNDDNRGRGCFKVATKALENLIKLNFKNLAINQTITKNNIADIDTMV TFAKSHKINLNIGTFCKLGRGFDDISLTKDERKEIDRIAMKYKKALNTFTIKVHCGQGIG EFSIDSMGNVYTCKLLDQKDFYLGNVRAEPLDYIFKNKKIDHFSYSSLGMEPCKNCSFKL LCGGSCRANHYYSKSKDDSSNVINNEECKIIKGMILEQMYQFVYGGKEHA >gi|237663594|gb|GG668924.1| GENE 245 216501 - 216773 273 90 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517647|ref|ZP_03947696.1| ## NR: gi|227517647|ref|ZP_03947696.1| hypothetical protein HMPREF0348_0630 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis Merz96] putative reticulocalbin-1 [Enterococcus faecalis R712] putative reticulocalbin-1 [Enterococcus faecalis S613] hypothetical protein HMPREF9492_00314 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_00402 [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF0348_0630 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis Merz96] putative reticulocalbin-1 [Enterococcus faecalis R712] putative reticulocalbin-1 [Enterococcus faecalis S613] hypothetical protein HMPREF9492_00314 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_00402 [Enterococcus faecalis DAPTO 516] # 1 90 1 90 90 141 100.0 2e-32 MLSINEKINYEDKGEFLVISLNEDGFMLEDKTSIFIFHRIEAKKFKNIDEAVSRLSKEFD TDNQNMYIVREQIKAFIEELLKYDVVVMRQ >gi|237663594|gb|GG668924.1| GENE 246 216800 - 217270 197 156 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517648|ref|ZP_03947697.1| ## NR: gi|227517648|ref|ZP_03947697.1| hypothetical protein HMPREF0348_0631 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0631 [Enterococcus faecalis TX0104] # 1 156 11 166 166 289 99.0 4e-77 MPTYKEGDILVAQCSNFEISTGKIVVIKSLYNNFFAHRLVSIGEGLAICKGDNFKYFDPP VRTNSIVGVIEDQADDSYVKEKIKIRAIYSNEKISDNFNILVLSKNLLREIHLENLVNFE VPVDSEEFCIYYRYLSNNLPKNQNDFFNKFDSIFSI >gi|237663594|gb|GG668924.1| GENE 247 217544 - 218779 1232 411 aa, chain + ## HITS:1 COG:lin2325 KEGG:ns NR:ns ## COG: lin2325 COG0420 # Protein_GI_number: 16801389 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Listeria innocua # 1 259 4 262 411 181 38.0 2e-45 MKLLHTADLHMDRSFEGLTGIPTALAKRLREANQQLLMNIVTVAIREAVDLVIFAGDTFH QSQTSISMQAQLMAALEQLKQAEIPVILTFGNHDYYKKDRYWFSFPDNVFLFEKEMVETL YFETKAGEQVAVSGFSYEHPWIDENKALEFPIKQAESDIHIGIYHGDTSRKAQQNYAPFT WKDLKATGYNYWALGHIHQPQIVSEQPLIVYPGTPQGHTKKEQSLQGVAVVTLSQNQATV QFEKVAEIDWTNEEISLAQCRDTQSVLSYLETSLLTKWHAHQQQQLMALTLKETQHLDVT VVQAIVNGELLSYLQQQLLQKTQGDFFVYRLILQAEEPTKEPIYLAASPNLLTALEKTYL DPIIFEDTTKELLRYPEFAGIFSMDEQWRLESLDLAHEQINEDFTIQEDPL >gi|237663594|gb|GG668924.1| GENE 248 218776 - 221487 2807 903 aa, chain + ## HITS:1 COG:lin2324 KEGG:ns NR:ns ## COG: lin2324 COG4717 # Protein_GI_number: 16801388 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 895 1 908 908 218 25.0 5e-56 MKLLAVEIVGFGKWQQQKITFESGNQLLYGANEVGKSTLYQFIQAMLFGFPTKGKRKRDY APKNGGSYGGRLWLEHPVFGEVQVERFKEKNKGQAIIYYQQQMGDEKTLQQMLHPLTKKL FQEVFTFQQEQLITSDKLTEEELQTSLLAIGVSGSQQLLTYRNAYFKEAQKIFKGKGQQP LLNQKLAAYQELKEQIQEKEAQQQTFQQLEETIRETEQQRVTLQQQLKETQQGLLQVAEQ QRHFPLYEEWQSLPEETENVVLVKEDQVQLEETFQEYMYLDKERQRLTKELSLQSEALDV PEGYAFYLEQEALIQQLLNQRYDMQQLMTESEWMTQTFDQNRQEMVLLENEWSWSPERPP QLFYDNETVQKWRQQQVAYTQALQKGQEQKAFLASQIENLEDQLTDFEKEHAAFFGEATR AQRAQKTSQPLWLLSGSLLTLLGFFLPSPLKWGLVLVGVSLIAKEVIGYATRKEASSDEV KEEWQTKLSQLDYLNEQFQQALNQEREAQLQVEQLEQAVAEQAQLHQLGKMQQIDTLMNQ RELITRYLLLVQTNEELMSQLKENQQKRQVFEEQVFPLMTQLPLQGKSLSEKLHFLEGFA EEMEKVRFAQEYQADGYLKQQLRELKTKQQEALTRIQPLLIRYRILSIADVPMRIQQLTT QQAQVGRGQELATQLGNLFPEAVTEATLKDRSLQLAQQQALEESQLNKIQEQYQALIYEK QQLMTDGTLDELYQRQAILKAEIKELAQRWSGYQLAGQLLMDLLTELSEQQLPSLLQYAS SYFALLTNQRYQSIQVAEGQLVAVTKEQEMFYLHELSTGTKDQLMMAVRFAFLAVQGEQL ICPIIIDDGWLHYDHQRKAQLAELFTKFAQKQQVICFSSDQEMVSYYQDLQQRVIALEGG SVK >gi|237663594|gb|GG668924.1| GENE 249 221484 - 222428 1053 314 aa, chain + ## HITS:1 COG:SP1980 KEGG:ns NR:ns ## COG: SP1980 COG3481 # Protein_GI_number: 15901803 # Func_class: R General function prediction only # Function: Predicted HD-superfamily hydrolase # Organism: Streptococcus pneumoniae TIGR4 # 10 311 4 305 308 366 58.0 1e-101 MKKLRELTVEELFESFVLIKNADVRVAKNGKKFIAFTFQDTSGTIDGKYWDASEDEITRF TAGNVVLLNGKREVYQNKPQVKILHMRLATAEEPSQPSLYMERAPLKKEEMVEEINQVIF EITNAHWNRIVRYLMTKYQQEFYEFPAAKRNHHAFANGLAYHTVSMLRLGKAIAKEYPEI NTSLLYAGIILHDLGKVLELSGAITTEYTVAGNLIGHLVLVDEEITKACLALKIDDREED VVVLRHMVLAHHGLLEYGSPVRPRIMEAEILHQIDTMDASIQMMLGAIRQTQPGEYTERI FGLDNRSFYVPKDK >gi|237663594|gb|GG668924.1| GENE 250 222468 - 223496 1230 342 aa, chain - ## HITS:1 COG:SP0981 KEGG:ns NR:ns ## COG: SP0981 COG0760 # Protein_GI_number: 15900858 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Streptococcus pneumoniae TIGR4 # 1 297 1 299 313 164 41.0 3e-40 MKKKLILAAAGAMAVFSLAACSSGSKDIATMKGSTITVDDFYNQIKGQSTSQQAFSQMVI YKVFEDKYGNKVTDKDVQKKFDDAKEQMEAQGAKFTDALKQYGLTEKDFKKQLKQTAAFQ EGMKAHLKITDEDLKTAWASFHPEVEAQIIQVASEDDAKAVKKEITDGGDFAKIAKDKST DAATKKDGGKIKFDSQSTTVPAEVKEAAFKLKDGEVSEPIAATNAQTYQTTYYVVKMTKN KAKGNDMKPYEKEIKKIAEETKLADQTFQAKVISDELKAANVKIKDDAFKNALAGYMQTE SSSASSEKKESKSSDSKTSDTKTSDSEKATNSSSKTTESSSK >gi|237663594|gb|GG668924.1| GENE 251 223660 - 224004 285 114 aa, chain - ## HITS:1 COG:no KEGG:EF0686 NR:ns ## KEGG: EF0686 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 114 1 114 114 200 100.0 2e-50 MKKFIKGLFFGAAAGTIGGLLAAPRSGKETRQHLINELEDYRSLKNQVTNDWDQVQRNLA VVEENVPLATEFSKDLQQEITDFKFQAEPRIAQIKEQIAKITAELPDTQTNKQK >gi|237663594|gb|GG668924.1| GENE 252 224005 - 224430 440 141 aa, chain - ## HITS:1 COG:lin2319 KEGG:ns NR:ns ## COG: lin2319 COG0537 # Protein_GI_number: 16801383 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Listeria innocua # 1 141 1 140 140 181 60.0 3e-46 MNDCIFCKIINGEIPSYKVYEDEKVYAFLDITQVTKGHTLMIPKQHVADIFEYNDVLASD VFARIPKVARALEKAFPEMEGLNILNNNKEVAYQSVFHSHVHLIPRYSKEDDFSIHFGNH QEDYSAEAMQEIAETIAKQVN >gi|237663594|gb|GG668924.1| GENE 253 224646 - 225383 262 245 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 2 232 8 239 309 105 30 2e-21 MSLTIEHLTGGYGHIPVLKDINFDVKSGEMVGLIGLNGAGKSTTIKNIIGLLTPQKGKIM IDGETLQQAPEEYRKKIGYIPETPSLYEELTLKEHIEVTALAYDIPLEEAFKRAEPLLKT FRLDNKLEWFPANFSKGMKQKVMVLCAFLIEPSLYIIDEPFLGLDPLAIHALLELMDTMR KQGAAILMSTHILATAEKYCDRFVVLHEGKLRANGTMAELRAEFNLPESSLDDIYLALTK EEKVG >gi|237663594|gb|GG668924.1| GENE 254 225385 - 226596 902 403 aa, chain + ## HITS:1 COG:lin2317 KEGG:ns NR:ns ## COG: lin2317 COG4473 # Protein_GI_number: 16801381 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted ABC-type exoprotein transport system, permease component # Organism: Listeria innocua # 4 403 10 405 407 188 33.0 2e-47 MGEFFSQRLSRHFKKMSKYLRYILNDHFVLVCMFLLGGLGLYYSQLLKELPRDFVWGRPL ILLSWLLLIQVGKLATLTEEPDKVFLLPKEKQFAAYLKRALRYSLILPIVVSFLGSGLLM PLIVVTTGWSFQTFFLFLVMLVCMIYTHLSLQSYGLYHLSSTTYRSWWFVWLISSLLIMT GAIYWTPWVGVIGGIILAVCLSSIWQNKMKQSFLDWEKMIQKEQNRMHRIYKFIQLFTDI PEVSSTVKRRKYLDPLLGVVKKTSENTYAYLFIRSFLRGSEYSGLLFRLILVGGVLLFFL QEFWIALVVALLFVYLIGFQLIPMYTQFDYMVMTQLYPISIEKKQAAIRRLIGGALSVAA IIFGGIVCLRLGNLQNSLLILGALIVEVVIFTKMYVPMRLNKL >gi|237663594|gb|GG668924.1| GENE 255 226725 - 227504 733 259 aa, chain + ## HITS:1 COG:L155396 KEGG:ns NR:ns ## COG: L155396 COG0510 # Protein_GI_number: 15672730 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted choline kinase involved in LPS biosynthesis # Organism: Lactococcus lactis # 5 255 2 252 257 201 37.0 2e-51 MEFQLDKDWRLQPIKGATGQTYMGIKETEKVFIKRNTSPLLAALSKEGLAPKMIWTKRTA NGDVLTAQEWLEGRLLHADEIGKRNDVIDVLYQLHHSNLLKDMLKKIGGEVCTPLTMLKE YKRQLPKELKRNSYLKEVITYLYNHLPEYPETSYVAVHGDVNHRNWLVSNNYLYLVDWDS VMVADPAVDLGMILSHYVPRSGWNQWLLSYGLIPNESTVQRIYWYGLFSFLQEIVRHHQE GERRAMTAEILQLKRMFSS >gi|237663594|gb|GG668924.1| GENE 256 227577 - 228227 921 216 aa, chain + ## HITS:1 COG:SPy1726 KEGG:ns NR:ns ## COG: SPy1726 COG0220 # Protein_GI_number: 15675576 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 211 1 211 211 296 66.0 2e-80 MRVRNRPGAAEYMAKYPQYVVEGPEKWQGKWQERFGNNHPIHIEIGSGKGRFIYEMAKAH PEINYIGIDMQLSILSIALDKLVAEPLPNLQLLRVDGEALTEYFAENEVDLIYLNFSDPW PKKKHEKRRLTYKNFLATDEIILKPNGEIHFKTDNQGLFEYSLSSFSKYGMIIERVWLDL HNSEFEGNIMTEYEEKFSSRGQRIYRVEARFVAKSS >gi|237663594|gb|GG668924.1| GENE 257 228426 - 229172 486 248 aa, chain - ## HITS:1 COG:L47971 KEGG:ns NR:ns ## COG: L47971 COG1737 # Protein_GI_number: 15673967 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 5 246 4 241 244 139 36.0 4e-33 MEQKLSESEQYLWHFIETHILEIPDYSIVKLSERANVSTATIVRTMKKKGYEGFTSFKHH LKDKENQNINFSALEKVDRGIRTAILKNEEEVTRTINMIEIGNIEDAIQKIKASRRIIIF ARGFSELIAQEMMVKFQLAGKYCELHTDPEIIKNISKKLSKKDVALFVSLNGETQELVVA GKNCYDSEIGTILLTASKHSSLMKYIEIPFVGFKSEGSFFPDYEVRSRLPLSILARILLD AYALRTTT >gi|237663594|gb|GG668924.1| GENE 258 229351 - 230277 889 308 aa, chain + ## HITS:1 COG:BH0827 KEGG:ns NR:ns ## COG: BH0827 COG1105 # Protein_GI_number: 15613390 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Bacillus halodurans # 3 303 2 299 306 216 40.0 6e-56 MTIYTCTLNLAIDLFIETEELVPFVVNRTKEDDIQANGKGVNVSLILKMLGIDNTALGVK AGFTGNYVEDYLKEKEITTDFIEVAGTTRINVFTKVTQDQKEYKLVNKGPKLSEEHVQRF LKKISELRKGDYLCVSGSLPQGVSPSILIEISRICFEKQVFLILDSSYEEILDCLPYQPF LLKPNEEELQEWFHTEVQTKDDYIFYGQELLKRGAKNILLSLGSEGALFINNEKVLSGNS PTGMVVNTACSGDAMLGTFLAGWHQGLSLEKNLKRSIAAGSSTAFRKGLTDFSDVQELEQ QIKIQEEE >gi|237663594|gb|GG668924.1| GENE 259 230282 - 231700 1740 472 aa, chain + ## HITS:1 COG:STM3255_2 KEGG:ns NR:ns ## COG: STM3255_2 COG1299 # Protein_GI_number: 16766553 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Salmonella typhimurium LT2 # 132 456 1 324 350 396 63.0 1e-110 MATYQLIAATGCPTGIAHTYMAQEALEQAAKRKGITIKVETHGQIGIENELTPAEIQGAE AVIIAADKDVQAERFAGKRIIDVPVSVGIKEADRLIEEALAGKGSIAAENQAVDELEQET QISSGNVGHSIYKNLMNGVSHMLPFVVAGGVLIALSFAIWGIYSFDPESSQYNATAAMLK SIGDASMGMMVPILSAYIAEGIAKRPGLVVGFVGGLIANTGGTGFLGGILSGFLAGYFIL LLQRVFKGLPKSLDGLKAIFLYPVIGVAVIGITMSLLADPMKAVNEGMMSFLASFQNSSP LVLGIIVGCMCAFDMGGPVNKAAYVTGTALLAQGNTSFMAGVSAACIAPPLITGFATLFF GKYFDTNERNAGLVNFILGSTHITEGAIPFAAKDPLKVLPIMMLGSSIAAVLTYMFGVQV PAPHGGFLVLPVVTHAVQWVLAILAGSLVGGLLLGFVQKSRIAKQEQSLSKK >gi|237663594|gb|GG668924.1| GENE 260 231727 - 232188 571 153 aa, chain + ## HITS:1 COG:hrsA_1 KEGG:ns NR:ns ## COG: hrsA_1 COG1762 # Protein_GI_number: 16128706 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli K12 # 11 151 34 175 183 84 28.0 9e-17 MAFIKENHIFLNQQLQTQEDVFHFLAKKSTELEVAQDAQEVFDKLNEREQEGTTGMMNGF AIPHAKAATIQQAAIIIVTLDQGVEWQSLDNQLTEFVIALFIPDAEAGTTHLKLLSSVAR LLLREEVTSGLKQASSPAEIATLLNNQLGEETE >gi|237663594|gb|GG668924.1| GENE 261 232185 - 233162 1105 325 aa, chain + ## HITS:1 COG:SA1994 KEGG:ns NR:ns ## COG: SA1994 COG3684 # Protein_GI_number: 15927772 # Func_class: G Carbohydrate transport and metabolism # Function: Tagatose-1,6-bisphosphate aldolase # Organism: Staphylococcus aureus N315 # 5 319 4 321 326 374 61.0 1e-103 MKKISEQKRKHLENLVDDQGIIGALAIDQRGALKRMMGKYKEVTAQEISDFKVLVSRCLT PETSAILLDPEYGLAAAENRAQTSGLLLAYEKTGYDASTPGRLPDSLDVWSVKRLKEAGA DACKFLLYYDVDESEAINERKKAYIERIGSECLAEEIPFFLEIVSYDANNSDSASKEYAK VKPHKVIEAMKEFSKDRYNVDVLKVEVPVNMNFVEGFGTESLYSQDEAQAFFNMQSEATQ LPFIFLSAGVSAAMFQETLKFAKKAGSSFNGVLCGRATWADGVLPFVQQGSEAAVAWLET TGKTNVDELNHVLRESAVSVFEKIQ >gi|237663594|gb|GG668924.1| GENE 262 233351 - 233884 417 177 aa, chain + ## HITS:1 COG:L196206 KEGG:ns NR:ns ## COG: L196206 COG3557 # Protein_GI_number: 15672951 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Uncharacterized domain/protein associated with RNAses G and E # Organism: Lactococcus lactis # 1 176 1 176 176 289 82.0 2e-78 MGIPKEGEFVTIQSYKHDGHLHRTWRDTMVLKTSEYSLIGVNDHTLVTESDGRRWVTREP AIVYFHKKYWFNIIAMIREKGVSYYCNLASPYVLDDEALKYIDYDLDIKVFPDGEKRLLD VDEYEFHSKLMDYPEDIDFILKENVKTLVDWINNEKGPFSPEYVDIWYQRYQQLSKK >gi|237663594|gb|GG668924.1| GENE 263 233972 - 234403 494 143 aa, chain - ## HITS:1 COG:SA0906 KEGG:ns NR:ns ## COG: SA0906 COG0454 # Protein_GI_number: 15926640 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Staphylococcus aureus N315 # 16 143 13 140 144 121 46.0 4e-28 MHVAQTKDTMSDLYLDAVRLRQRVFVAEQGVPEEMEIDEYEARCIHFVLYTDHVAVATCR LLPLENGVMKLQRMAVEKAYRGADYGRVIMEAAENFAKEQGYHKITLGAQVTAVGFYERL GYQKTGAPFMDAGIEHYEMNKEL >gi|237663594|gb|GG668924.1| GENE 264 234548 - 235693 1273 381 aa, chain + ## HITS:1 COG:lin0908 KEGG:ns NR:ns ## COG: lin0908 COG0628 # Protein_GI_number: 16799980 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Listeria innocua # 3 362 4 363 378 306 47.0 4e-83 MINRFKESKLFFWSVELLVVAMLLFIASKINFLFAPIGTFFSTLFAPVLVAGFLYYLLNP VVNLLMKTKMKRIYAVLLVFLLLIIALVLILLTIIPKLADQLASLASSMPDFFKQVETWI YEIAELPIFKQIDLTSYIEKMDISYANIIQQFLSSLSSSLGSIVSTVASTTIVLVTAPFI LFYMLKDGDKLVPAIQRFLPEKRKDDIVDLLGQLNQTLSSYISGQAIECLFVGTFTIIGY SLLGVRYAFLFGVIAGFTNLIPYLGPYLGLAPAVLVTIFNEPVKATLCCLVVLVVQQLDG NIIYPNVIGKSLKIHPLTIILILLVAGNLAGLLGIFLGVPFYAICRTIIYYVIDMVKAGR SEKVTNAVLLGNETNTKENNG >gi|237663594|gb|GG668924.1| GENE 265 235868 - 237247 1591 459 aa, chain + ## HITS:1 COG:L64811 KEGG:ns NR:ns ## COG: L64811 COG1253 # Protein_GI_number: 15673796 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Lactococcus lactis # 1 443 1 442 449 465 57.0 1e-131 MNNADPESQSLIAQLLLLVVLTFINAFLAAAEIAVVSVNKNRVEQKAEDGDAKAQKLLKV LQDPNNFLSTIQVGITLVNILSGASLAETLSSRLAPVLGGGAAAKSLASIIILALLTYVS IVFGELYPKRIAMNKSEEVAQLTSGAVRFLGVIARPFVWLLSASTDLLSKITPMTFDDAD SKMTRDEMRYMLETEGVLENEELEMLQGVFSLDTKVAREVMVPRTDAFMVDIQDDVQENI NLILGENYSRIPVYSEDKDKIVGILHTKTLLKAARNLGFENIELGAIIQEPLFVPETIFI DDLLYELKRTQNQMAILLDEYGGVVGLATLEDLLEEIVGEIDDETDEVENLYTQVADNEY LVQGRMLIDEFNEVFETDLHMSDVDTMAGYLITALGTIPDEGEKPSFEVGNIKLTAEEME GTRLLVLRVHFYDEETVDEEPEENRRFFRKEMEDDEPRR >gi|237663594|gb|GG668924.1| GENE 266 237421 - 238995 1869 524 aa, chain + ## HITS:1 COG:SP0439 KEGG:ns NR:ns ## COG: SP0439 COG4108 # Protein_GI_number: 15900357 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Streptococcus pneumoniae TIGR4 # 3 524 1 514 514 798 76.0 0 MTINQKEAVDSRRTFAIISHPDAGKTTITEQLLLFGGAIRQAGTVKGKKTGNFAKSDWME IEKQRGISVTSSVMQFDYQDKRINILDTPGHEDFSEDTYRTLMAVDSAVMVIDSAKGIEA QTKKLFQVVKKRGIPIFTFINKLDRDGREPLELLEELEELLDIESYPMNWPIGMGKGLEG LYDIYNERVELYRPENNGGERFIPLKDGDIPSDLPLHNNSVYQQVLEDVELLVEAGDEFS EEKIARGDQTPVFFGSALTNFGVQTFLETFLQFAPAPHAHKTEEGGEVSPYEKEFSGFVF KIQANMNPAHRDRIAFVRICSGVFERGMDVTLGRTGKKVKLSNVTQFMADARENVTEAVA GDIIGVYDTGNYQIGDTLYEGKMNVQYEELPSFTPELFMKVTAKNVMKQKSFHKGIYQLV QEGAIQLYKTYLTEEYIIGAVGQLQFEVFQYRMSNEYNAEVVMTPMGSKIARWINPEDLD ERMSSSRNILARDRFDQPLFLFENQFAERWFADKYPDVELKSLM >gi|237663594|gb|GG668924.1| GENE 267 239171 - 239614 457 147 aa, chain + ## HITS:1 COG:no KEGG:EF0702 NR:ns ## KEGG: EF0702 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 147 1 147 147 232 100.0 4e-60 MNFYGIEYLKSQSNLNDYLKYFFIFALLIGLVIVFSFYVRHQIQTKYRELSIIIFLSLLF VLGVQYSNYQLNQNQHSQSSQMVHFVEQVAQEKKVSPEKVYVNGTQLADGTIVKIDEVFY KMSLSTDQQSYTLQETYLLTPTIEIIK >gi|237663594|gb|GG668924.1| GENE 268 239630 - 240277 660 215 aa, chain + ## HITS:1 COG:L163025 KEGG:ns NR:ns ## COG: L163025 COG2323 # Protein_GI_number: 15674091 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 1 209 1 209 211 319 80.0 2e-87 MQFYSPIIIKFALGIICLIVQINLMGKGNLAPTSAMDQVQNYVLGGIIGGVIYNDSITVL QFVLVLILWTLLVLILKFAKEHNRYVKQIVDGKPITLIKDGQVVVKECLKNGISANDLMF KLRANGIYEVQLVKRAVLEQNGQLTIVEYGDESIRYPIIVDGQANMDVLELIKKDEHWLL TQIQEQGFQRLQEIYLGEYLSGQLSLSPYEEKTIT >gi|237663594|gb|GG668924.1| GENE 269 240383 - 241420 1024 345 aa, chain + ## HITS:1 COG:no KEGG:EF0704 NR:ns ## KEGG: EF0704 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 339 14 352 356 577 98.0 1e-163 MIVLMGCQPDQRTEKMKESTEAEAGQVTSGASEATNATSVKQEEQANTNDQPKESAAKVS YERNGHTFEVDAVSGATVEANNGQSGISPEEKAQKMYWSGRPEIGEVQGDYYHHEVVFDG GYTALIDVVVKDQQIQLVEFDERGPKNYYSEEWAGVTKRLSGYANFQANNARTDQSLVTV VNTMTFLENQMVAENRLDGAFQTAKGQSNSANNGYLPAARALAKEIKEPSKEHYTSLTED FGEGLSGRLTVITLKDSGKITDLRYDEYFADTEEEIKDAKLKAYSRQSKYFSKDYAQKSG ENFKKEVDDLRKKAIEENKLVSPTNEEAWSENYQSLVKKNNVTIN >gi|237663594|gb|GG668924.1| GENE 270 241458 - 241772 444 104 aa, chain - ## HITS:1 COG:no KEGG:EF0705 NR:ns ## KEGG: EF0705 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 104 1 104 104 170 100.0 1e-41 MKLVNVTNSYKQLVNKQLENTDAYFVKVYSAGNTTAVYSEAAHHVEVLIMNKNRRIRPTE VKEILAKLLKRLPKEAYDPDEISIIELNHVTEVSVPLKVSLMEN >gi|237663594|gb|GG668924.1| GENE 271 241967 - 244207 1679 746 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 57 708 124 788 815 651 52 0.0 MICQNCQQNEATIHLYANVNGQRKQLDYCQSCYQKLKNQANNSPQNMGQDPFGFGSLDDL YRSLSRQMQQGNPYEQQTPPTQFGDGGNGGQPPRGGAGAGQGLLGEYGINITEAARQGDI DPVVGRDQEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGDVPQKLLDKEV IRLDVVSLVQGTGIRGQFEERMQKLIEEITEAENVILFIDEVHEIVGAGAAGDGNMDAGN ILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVQVDEPTVAETITILHGLQKRYE DYHHVKYTDEAINAAANLSNRYIQDRFLPDKAIDLLDESGSKMNLTIQLVDPKTIDKKLA EAEQQKQQASAEEDFEKAAYYRDQINKLQAMKKKQISDEETPVITEKDIEAIVEQKTGIP VGDLKEKEQTQLKNLAVDLKAHVVGQDDAVDKVAKAIRRNRVGLGKQNRPIGSFLFVGPT GVGKTELAKQLAFELFGSEDSMVRFDMSEYMEKHSVSKLIGSPPGYVGYDEAGQLTEKVR RNPYSLILLDEIEKAHPDVLHMFLQILDDGRLTDAQGRTVSFKDTIIIMTSNAGTGAVEA NVGFGAAREGVTKSVLGQLNNFFTPEFLNRFDGIIEFKALSKENLMNIVSLMLEEVNGLL AKQKLHIEVPTEVKEKLVDLGYDPAMGARPLRRTIQEQIEDGIAEYYLDHPENHQLVATL DNEGKIIVTGAQEVTKTETSTSDQAE >gi|237663594|gb|GG668924.1| GENE 272 244333 - 244509 113 58 aa, chain - ## HITS:1 COG:no KEGG:EF0707 NR:ns ## KEGG: EF0707 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 58 1 58 58 86 96.0 3e-16 MISPLFLLNINSYSLLENGAIVCKKIESLSFFKQGLLLDSLTKNAIITSKVKNGQVVL >gi|237663594|gb|GG668924.1| GENE 273 244509 - 244700 383 63 aa, chain + ## HITS:1 COG:no KEGG:EF0708 NR:ns ## KEGG: EF0708 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 63 1 63 63 108 100.0 8e-23 MAENPFVEKIASLKAGEISELIVEQNEFFQFRDAWISLPDRAEIVGEAGLNGRIIYRYQK EEE >gi|237663594|gb|GG668924.1| GENE 274 244871 - 245137 414 88 aa, chain + ## HITS:1 COG:L120335 KEGG:ns NR:ns ## COG: L120335 COG1925 # Protein_GI_number: 15672099 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Lactococcus lactis # 1 88 1 88 88 115 76.0 3e-26 MEKKEFHIVAETGIHARPATLLVQTASKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGSD VTITVDGADEAEGMAAIVETLQKEGLAE >gi|237663594|gb|GG668924.1| GENE 275 245137 - 246864 2224 575 aa, chain + ## HITS:1 COG:SP1176 KEGG:ns NR:ns ## COG: SP1176 COG1080 # Protein_GI_number: 15901041 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Streptococcus pneumoniae TIGR4 # 1 573 1 573 577 858 78.0 0 MSEMLKGIAASDGVAVAKAYLLVQPDLSFNKTSVEDTEAEATRLDDALAKSTEELQAIRD KAAQSLGEAEAQVFDAHLMVLSDPEMVGQIKQNIQDNKVNAEAALKEVTDMYIGMFEAMD DNAYMQERAADIRDVAKRILAHLLGVTLPNPSMINEEVIVVAHDLTPSDTAQLDRTYVKA FVTDIGGRTSHSAIMARSLEIPAIVGTKEITDKVKAGDILAVNGIIGDVIIDPTDAEKSE FEAEAKAYADQKAEWDKLKNAETVTADGKHVELAANIGTPKDLAGVHKNGGEAVGLYRTE FLYMDSSDFPTEEDQYQAYKAVLEGMEGKPVVVRTMDIGGDKELPYLTLPHEMNPFLGYR ALRISLSELGDGMFRTQMRALLRASVHGNLRIMFPMVATLKEFRAAKAIFEDEKQKLVNE GVEVSNDIQVGIMIEIPAAAVLADKFAKEVDFFSVGTNDLIQYTMAADRMNERVSYLYQP YNPSILRLIKNVIDAAHAEGKWAGMCGEMAGDQTAVPLLLGMGLDEFSMSATSILKTRSL MKRLDTTKMAELADRALKECDTMEEVVALVEEYTK >gi|237663594|gb|GG668924.1| GENE 276 246909 - 247943 952 344 aa, chain - ## HITS:1 COG:no KEGG:EF0711 NR:ns ## KEGG: EF0711 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 31 344 1 314 314 581 98.0 1e-164 MNQQLFKWLHAISVIIFLFFIGSYSVEASEMTFSVKAILPDNQRTKETSYFDLRVAPNQT QKLQIELTNQTANDITVLASANAAITNDNGLADYSHAETKKDPSAPFTFNEIAQLPKEIY LPKHSTKTVECQLTLPEKPFNGYVLGGLYFEQKSDEQPAHSENGVAINNRFSYVVGVLLS ETDEPVQPKLSLNEVKTDQANGRNRVLMNLQNKQAAMIKKLQVDASLYYEKEAKPRYENH QESLTMAPNTNFNYRIDLKEQPFVPGNYTVKIKANDGYQDYSWEKHLVIQEKEAKKYNAT AVNLPPEKHTKFPWKLVSSITLVFLFILGSTIYYFKKKIRESQQ >gi|237663594|gb|GG668924.1| GENE 277 248024 - 248761 720 245 aa, chain - ## HITS:1 COG:no KEGG:EF0713 NR:ns ## KEGG: EF0713 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 245 1 245 245 373 99.0 1e-102 MKKIVRISSILFVATPLMLLNSPKVEAAQVASIQSNADITFALDNTVTPPVNPTNPSQPV TPNPADPHQPGTAGPLSIDYVSNIHFGSKQIQAGTAIYSAQLDQVQNSTGDLISVPNYVQ VTDKRGLNLGWKLSVKQSAQFATSDSTPAVLDNASLTFLAATPNSTQLLSLAPLTVPVTL DPTGAATSPVATAALSTGMGTWTLAFGNGATAAQGIQLTVPATTKKVAAKQYKTTLTWIL DDTPL >gi|237663594|gb|GG668924.1| GENE 278 248816 - 251029 1448 737 aa, chain - ## HITS:1 COG:no KEGG:EF0714 NR:ns ## KEGG: EF0714 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 737 27 763 763 1223 98.0 0 MAHSETLNPTTHASTFSETFTSVSTEQQTTQATDIVEQETGQTHASSENDEPMAPMPASV SVGNSTLKSTLSTGTYNQDIITLSYEYSVTLIGLAINDRPIIAIQLPTEISSQLDNDTLK QQDFLTLLTGTVSYPGTATQDIHSSTNGVSLSYSSTYHSVYLTFPSSTLVLLPGTKWSAA ISFDVGALYKRGISIPPALNGKDYPIRGTFTDVGTGLGAINIIIGNNTKTGVISKAQLSL GNYPVPQVTPAKLTQPNHLDTTVTGTIQQVQDPNYNYSVQLTLNRHDGTTTPIVVKGISV DAAGNFSTSLASPLEYGDTLSTIVFARSKTSTDYIQSSPSADQSVNWSIQPVTNVVANAG STQLSGKASQASNGTYQVKVQINGGSIFTTSLDSNGHFQFANLPTFQGGETVSLWVQGLS NRTGLPLLTSSTVSQTVAYPVPQLTVTQTIERKNAQGLWEAANSVVSGQIIRFTLITRLT NQPATWMNQQLRATVPKGLAQLSAATLTKQSAAGLSTPIAGLQLLTDSSTGLPYWSYHNS LTADNFTEANTQFTLQYTATVTEEWINQFLLFSSTVTGNDGGGTPITPITKEQSLPIKNG TLRFVQMPTTVSFKNLPFPSKRTIYSPSTISAPFLIADGRVAKTPWHLLVRESQPMHSTS TNKTIQQAFIYRKNGSDFPISSLATEVYQYTATDDNNVEIPWNQQNGLFLSVAPDLNLTV KESYTAELQWILSDTPL >gi|237663594|gb|GG668924.1| GENE 279 251455 - 252738 1983 427 aa, chain + ## HITS:1 COG:SPy1896 KEGG:ns NR:ns ## COG: SPy1896 COG0544 # Protein_GI_number: 15675709 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Streptococcus pyogenes M1 GAS # 1 427 1 427 427 456 63.0 1e-128 MSAKWEKKGTNDGVLTFSIEQAVIEKGLTQAFNKVKKNLNVPGFRKGKVSRTVFNRMYGE EALYEDALNAVLPEAYEAAVLEAGIEPVAQPKIDVESMNKGEDWVITAEVTVKPEVKLGE YKNLTVSKQDREVTDEDVEARLKREQESQAELVIKEDAAAENGDTVVIDFEGFLGDEAFE GGKGENYSLELGSNSFIPGFEDQLVGKKAGEEVEVNVTFPEDYQAEDLAGKEAVFKVTVH EVKAKELPELDDEFAKDVDDSVESLDELKEKFRKELTEAKEAAAEEAKDEEAIRLAVENA EIVELPHVMVHDEVHRSMDEFLNNMQRQGISPEMYYQLTGSTEEDLHKQFEGEAETRTKT NLVIEAVAKAENIEVTQEDIDAEVKDLAEQYNMPEAQVRKVLNNDMLEHDIRMKRAVETI TETAVEK >gi|237663594|gb|GG668924.1| GENE 280 252850 - 253512 560 220 aa, chain + ## HITS:1 COG:no KEGG:EF0716 NR:ns ## KEGG: EF0716 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 220 1 220 220 404 100.0 1e-111 MDKNYSKIKYGLVVFGILCLTYNLWEFFTAKYSTKQGVTFVIECLLGIGLIFLPDLVNKF LKIIMPPTIVYFYWFFLFISVFLGTSLHMISIISFWDKILHFVSPMLLTAVGYGIAGFLL KKTKYADVSPWLFLLFGFAFAGLCGVFWEFWEFICDSLGNMNLQRYNMSNGQPFIGRAAL MDTMGDLFTNTLGAFVMGVYTYIRSKGNPEYLENYAIKRK >gi|237663594|gb|GG668924.1| GENE 281 253656 - 255578 2384 640 aa, chain - ## HITS:1 COG:SPy0855_3 KEGG:ns NR:ns ## COG: SPy0855_3 COG1299 # Protein_GI_number: 15674888 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Streptococcus pyogenes M1 GAS # 299 634 2 358 360 422 65.0 1e-117 MNINDLLIKDVMIMDLQATDKKGAIDEMVQKLYDGGRISDIDTYKEGILKREAQTSTGLG DGIAMPHAKNSAVKEPTVLFAKSKKGVDYEALDGQPTYLFFMIAAPEGANDTHLQALAAL SRLLIDPDFVGKLKEAETPEAVQALFQAAEDQKEAEEKAEQEQTTPAPESNRKYIIAVTA CPTGIAHTYMAEDALKKKAKEMGVDIKVETNGSEGIKNRLTAEDIARADGVIVAADKKVE MNRFDGKKLVNRPVSDGIRKTEELINLAISGEAPTFHGSDSAASDQEDSAEGSIGSRIYK DLMNGVSHMLPFVIGGGIAIALSFMIDQFIGVPQDQLANLGNYNDVASWFNQIGGAAFGF MLPVLAGFIASSIGDRPGLVAGFAAGALANAGGAGFLGALIGGFLAGYVVVLLRKVFKGL PKSLDGIKTILFYPVFGLIITGLLMLVINIPMKAINDALNHFLLGLDGTNAALLGALLAG MMAIDLGGPVNKAAYVFGTATLASTVAEGGSVVMASVMAGGMVPPLAIFVATRLFKNKFT KDQQDAGLTNIVMGLSFVTEGAIPFAAADPLRVIPSFVVGSAFTGALVGAFGIKLLAPHG GIFVVFLLSNPLLYLLFILIGAIISGIVYGLLKKPVEVPA >gi|237663594|gb|GG668924.1| GENE 282 255602 - 256519 988 305 aa, chain - ## HITS:1 COG:lin2430 KEGG:ns NR:ns ## COG: lin2430 COG1105 # Protein_GI_number: 16801492 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Listeria innocua # 1 304 1 304 307 367 63.0 1e-101 MIYTVTLNPSIDFIVHVDHLQIGDLNRMTNDFKLPGGKGINVSRILKRMETESTALGFLG GFTGSFIADWLKKEEIQTNFTPVSADTRINIKLKSDTETEINGLGPALTNEEIQELKQAV SRVQAGDIVVLSGSTPASLRKGFYEELIQIAKEKGAEFVIDTTGEDLMNALSQKPLLVKP NNHELAELYHTTFTSVEDILPYGHRLLEEGAQHVIISMAGDGALLFTTEGVYRSNVLKRP LKNSVGAGDSMIAGFIGNFSKTQDPLEAFKWGVACGSATAFSDDLASEDFIQELIHEVTI EKISE >gi|237663594|gb|GG668924.1| GENE 283 256516 - 257268 624 250 aa, chain - ## HITS:1 COG:lin2431 KEGG:ns NR:ns ## COG: lin2431 COG1349 # Protein_GI_number: 16801493 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Listeria innocua # 1 250 1 250 250 221 48.0 9e-58 MLTEERHQKILQLLDQKSVVKSQELASLFNASESTIRRDLQELEDANLLERIHGGAKRIL NLGFEQNMTEKSIKNTHEKQKIASLAASCVQDGDMIYLDAGSTTLEMIPFLVGKQIHVVT NSVHHAAKLSDMEIPTIMLGGTLKLSTKAIIGATSMEQLQHFRFNKAFLGTNGAHLEFGL TTPDPEEAALKALAIHQAETAYVLLDHTKFNEVTFTKVEELESVTLLTDYCPAESLQGFQ QKTILMEANK >gi|237663594|gb|GG668924.1| GENE 284 257407 - 258966 1497 519 aa, chain - ## HITS:1 COG:SP1157 KEGG:ns NR:ns ## COG: SP1157 COG0038 # Protein_GI_number: 15901022 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Streptococcus pneumoniae TIGR4 # 36 492 42 499 516 327 46.0 5e-89 MNNDVHEIKQLDGTRIGFILKGIVVGILVGFVVSLFRLGIEKIGEQVVHLYQTFHEKPFW MIPWFLFSLVLAYLLGRLIKSEPAIKGSGIPQVEGQLQGQLEIHWFPVLWKKFIGGILAI SPGLFLGREGPSIQLGAVVGQGYSQWRQSTKSEEKILISSGASAGLAAAFNAPIAGLLFV LEEVHHSFSPLVWLTSFSAAISANFVSLHFFGLQPVLYIGPVKSLPLEYYWTLVLLGVLL GLLGWIYQKTLLSLPKVYGKIKGLSSNYYGFIPFILILPIGYFFPHLLGGGNQIVLALGN QPATIWALVGLLVLRFVFSMVSYGSNLPGGIFLPILTLGAIIGTLYGSLLVQYVGMDPIF VKNFLIFAMAGYFTAIGKAPLTAIILVTEMVGNFSHLMSLGVVALVSYITIDSLGGKPIY ESLLERLVPSKVSNIRGHKTIIELPITAESSLDDTMVRDFVWPKQMLLTSIRRGESEILT HGDTVMHVGDVLIILTDEKLAYQVKKEIYQKTLPNDLVN >gi|237663594|gb|GG668924.1| GENE 285 259131 - 261389 2265 752 aa, chain + ## HITS:1 COG:SPy1267 KEGG:ns NR:ns ## COG: SPy1267 COG0210 # Protein_GI_number: 15675225 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Streptococcus pyogenes M1 GAS # 7 751 4 771 772 886 59.0 0 MTQKHALVQGMNPRQEEAVLHTEGPLLVMAGAGSGKTRVLTHRIAYLIEEKEVNPWNILA ITFTNKAAKEMKERVNKLLETGGEDVWVSTFHSMCVRILRRDVDQIGYNRNFTIIDPSEQ KTLMKRILNDLNIDSKKYDPRSILGTISNAKNELQTPEKVAEMQGSLYEEIVAKCYEAYQ KELRKNQCMDFDDLIMNTIRLFNEQPDTLAFYQNKFHYIHVDEYQDTNHAQYTLVNLLAA RFKNLCVVGDADQSIYGWRGADMQNILDFEKDYPDASVILLEQNYRSTKNILAAANDVIK NNRNRREKELWTENIDGEKIVYYRGDTERDETQFIVSQIQKEMRENDRIYGDFAVLYRTN AQSRVVEEMLLKSNIPYTMVGGHKFYDRKEIKDILAYLSLIANPDDSISFERIVNEPKRG IGKSSIEKLRLFADTHGWALLEAAQNVDLANISGKAGKELGNFGMMIQDLTKTVPYLTIT ELVKETLQRSGYREALMAQNNLESQARLENLDEFLSVTQEFDKRFEAQNNDDPNGEETKL ADFLTDLALVSDLDNLEESSSQVTLMTLHAAKGLEFPVVFLMGLEEGVFPLSRAMLEESE LEEERRLAYVGITRAEEALFLTNAYSRTLYGRTQYNRPSRFLEEIEAERLMKQGAAANLQ KAPARTFDPKVFKPSASKPAYTQPATKSVSNKVASGGEKVSWQAGDKVQHKAWGVGTVVR VGGSAKDLELDIAFPEKGIKRLLAAFAPIEKI >gi|237663594|gb|GG668924.1| GENE 286 261515 - 263545 2273 676 aa, chain + ## HITS:1 COG:lin1870 KEGG:ns NR:ns ## COG: lin1870 COG0272 # Protein_GI_number: 16800936 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Listeria innocua # 10 671 2 663 671 802 59.0 0 MEQQPLTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELVDIETEFPDLI TPDSPTQRVGGKVLSGFEKAPHDIPMYSLNDGFSKEDIFAFDERVRKAIGKPVAYCCELK IDGLAISLRYENGVFVRGATRGDGTVGENITENLRTVRSVPMRLTEPISVEVRGECYMPK QSFVALNEEREENGQDIFANPRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMKAKTQ FEALEELSAIGFRTNPERQLCQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFALQDE LGFTVKAPRWAIAYKFPPEEAETVVEDIEWTIGRTGVVTPTAVMAPVRVAGTTVSRASLH NADFIQMKDIRLNDHVIIYKAGDIIPEVAQVLVEKRAADSQPYEMPTHCPICHSELVHLD EEVALRCINPKCPAQIKEGLNHFVSRNAMNIDGLGPRVLAQMYDKGLVKDVADLYFLTEE QLMTLDKIKEKSANNIYTAIQGSKENSVERLIFGLGIRHVGAKAAKILAEHFGDLSTLSR ATAEEIVALDSIGETIADSVVTYFENEEVHELMAELEKAQVNLTYKGLRTEQLAEVESPF KDKTVVLTGKLTQYTREEAKEKIENLGGKVTGSVSKKTDIVVAGEDAGSKLTKAESLGVT VWNEQEMVDALDASHF >gi|237663594|gb|GG668924.1| GENE 287 263699 - 263809 191 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSVEAALGLMIGFATLVVTIIFGILALVLDNKNNRS >gi|237663594|gb|GG668924.1| GENE 288 264127 - 264432 425 101 aa, chain + ## HITS:1 COG:L0475 KEGG:ns NR:ns ## COG: L0475 COG0721 # Protein_GI_number: 15672144 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Lactococcus lactis # 3 97 4 98 101 108 64.0 3e-24 MAITEEQVKHVAKLSKLSFSEEELADFTNQLDKIIDMVELLEEVDTTGVPFTSNVNESIN VMREDVATPGMDRKELMRNVPESENGYIKVPAIMDNGEAGA >gi|237663594|gb|GG668924.1| GENE 289 264432 - 265901 400 489 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 1 472 1 452 468 158 28 2e-37 MEKLYDKSLTELHDLLVSKEITAVDLTEETLNRIQDTEEQLGSFITVSEEKAMALAKAID LKGITESNPLAGIPIGIKDNIVTKDILTTAGSKMLHNFDPIYDATVMDKVYQADMIPVGK LNMDEFAMGGSTETSYFKKTKNAWDQTKVPGGSSGGSASAVAAGQVPVSLGSDTGGSIRQ PAAFNGIVGLKPTYGRVSRFGLIAFASSLDQIGPLTRNVKDNALALNAISGYDEKDGTSA GVSVPDFTADLTGDIKGMKIALPKEYLGEGVQSDVREAVLKAAETFKSLGATVEEVSLPH SKYGVAVYYIIASSEASSNLQRFDGIRYGYRSENVQNLEDVYVNSRSEGFGTEVKRRIML GTFSLSAGYYDAHFKKAGQVRTLIKQDFENVFADYDLIIGPSTPTVAFGLGENINDPITM YMNDILTIPVNLAGLPGMSIPAGFSEGLPVGLQIIGKHFDEHTMYKAAYAFEQATDFHTK KPVILGGDD >gi|237663594|gb|GG668924.1| GENE 290 265901 - 267331 1797 476 aa, chain + ## HITS:1 COG:lin1866 KEGG:ns NR:ns ## COG: lin1866 COG0064 # Protein_GI_number: 16800932 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Listeria innocua # 1 476 1 476 476 725 77.0 0 MNFETVIGLEVHVELKTNSKIFSSAPAHFGAEPNSNTNVVDWSYPGVLPVMNKGALEFGM KAALALNCEISKETHFDRKNYFYPDNPKAYQISQFDQPIGHDGWIEIEVEGKKKKIRIER VHLEEDAGKNIHGTDGYSYVDLNRQGTPLIEIVSEADMRSPEEAYAYLEALRSIIQFTEV SDVKMEEGSMRCDANISLRPYGQEEFGTKAELKNLNSMNFVKKGLAYEEKRQAKVLLSGG EIQQETRRFDEATSTTLLMRVKEGSSDYRYFPEPDVPRFSIDDEWIEKVRASLPEMPASR RARYISELGLPEYDAMVLTLTKEMSDFFEATLANGADAKQASNWLMGEVSAYLNSEKVEL ADTKLTPENLAGMITLINDGTISSKIAKKVFKELIENGGDAKEVVEAKGLVQLSDPAQLL PMINEVLDNNQQSIDDFKNGKDRAVGFLVGQIMKATRGQANPGVVNKLLQEELSKR >gi|237663594|gb|GG668924.1| GENE 291 267350 - 268438 1263 362 aa, chain + ## HITS:1 COG:SPy0752 KEGG:ns NR:ns ## COG: SPy0752 COG1597 # Protein_GI_number: 15674801 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Streptococcus pyogenes M1 GAS # 3 348 6 337 340 407 61.0 1e-113 MKKARVIYNPTSGKELVKKNLADILSILEECGYEASAFATTPEENSARNEAHRAARAGFD LLVAAGGDGTINEVVNGIAPLKRRPKMAIIPAGTTNDYARALKIPRDNIVKAAEVIKKNQ TVKMDIGQAGKNYFINIAAGGHLTELTYEVPSELKSIFGYLAYLAKGAEMLPRVKPIKMR MTYDEGVYEGNASMFFLGLTNSVGGFEQIVPDAKLDDGKFSLIIVKTANIFEILHLVALM LNGGKHVEDHRLIYTKTSYLHAETLEKNNKMMINLDGEYGGDAPMTFKNMHQHIEIFANG DALPSNAIMGSVLTGSDEIVVESEDEEEEAYNEASKEFVKEVERLTDEDIDGDGKIAEKE KH >gi|237663594|gb|GG668924.1| GENE 292 268638 - 270011 1621 457 aa, chain + ## HITS:1 COG:BH0687 KEGG:ns NR:ns ## COG: BH0687 COG2265 # Protein_GI_number: 15613250 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Bacillus halodurans # 5 452 7 454 458 481 54.0 1e-135 MKNYPVKKNDVIEVEIVDLTHEGLGVAKVDHYPLFIENALPGEKLEIKVLKTGKSFGYGK VLTVLKSSEQRVPVKDENFTKVGISPLQHLAYGAQLSFKTQQVENVMQRVAKLPEVPVLP TIGMNDPWHYRNKAQIPVRKIDNQLQTGFFRKNSHDLIPMEHFYIQDLEIDAAIVKIRDI MRKYSVKPYNESDNTGNLRHIVVRRGYHTGEMMVVLITRTPKLFPISKIVPDILEAIPEV VSIVQNVNPKRTNVIFGNETILLHGSEKNTDTIFDLKFEISARSFYQVNPQQTEVMYQKV KEYAALTGNEIVVDAYCGIGTIGLTLAQDAKQVYGIEVIEEAVKDAENNAKLNNIENATF TAGLAEELLPKLVENGLQPDVVVVDPPRKGLDGQLVNTLIETQPERIVYVSCNPATLARD IALLTEGGYEAKEIQPVDNFPQTTHIESVTLLTKAVD >gi|237663594|gb|GG668924.1| GENE 293 270012 - 270140 219 42 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227517695|ref|ZP_03947744.1| 30S ribosomal protein S9 [Enterococcus faecalis TX0104] # 1 42 1 42 42 89 100 2e-16 MNEKEKMLELIKKKQGGGRSKKMETPKNDRKNMRKGPKIFNK >gi|237663594|gb|GG668924.1| GENE 294 270280 - 270597 407 105 aa, chain + ## HITS:1 COG:no KEGG:EF0730 NR:ns ## KEGG: EF0730 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 105 1 105 105 179 99.0 5e-44 MEYVTTLEELEEKITDNRLQAVFLTAKNCSVCTVDKPIVEKISTKYEFPTYIAEADKSPE IIGQLNAFSAPTIILYYEGKEIHRQAKIINFQEIEKRVRQVQENS >gi|237663594|gb|GG668924.1| GENE 295 270640 - 271605 625 321 aa, chain - ## HITS:1 COG:L0226 KEGG:ns NR:ns ## COG: L0226 COG2771 # Protein_GI_number: 15673683 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Lactococcus lactis # 1 315 1 325 328 207 41.0 2e-53 MTFVFIYNILLIILYSFTSTFTLNLYLKNKQPIFLLLLFLMVIFICDNVIVYMTEFINSF ATEYNQTFMTAPFLKTIIFICCNFAYLAIINTISGRPFKNYQFVWLFLIDLWMLAIPFSQ NSALKVWLYYLPNQLFLIYLGFYALYQLRIDPLSALAKKYLRFIGWLSIGFGVAILLEDT FVIFNIDQYSDIVFKINNRNVSEDIYTIILSIAIIYFCNRDFPLSVLEKDAAKLEENQSD EPVLLAPFCDAYQLTQREREVLSLLLECKTNQDIANELFLSIGTVKTHIHNIFVKLEVNK RAEVFVSYQLFSQQQTEHLAR >gi|237663594|gb|GG668924.1| GENE 296 271884 - 272903 1215 339 aa, chain + ## HITS:1 COG:L0113 KEGG:ns NR:ns ## COG: L0113 COG0078 # Protein_GI_number: 15673682 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Lactococcus lactis # 2 334 6 338 340 554 79.0 1e-157 MKRDYVTTETYTKEEMHYLVDLSLKIKEAIKNGYYPQLLKNKSLGMIFQQSSTRTRVSFE TAMEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIP VINGMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNF VHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDASSVEGADFLYTDVWYGLYEAELSEE ERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDEVIDGKNSICFDEAENRLTS IRGLLVYLMNDYEAKNPYDLIKQAEAKKELEVFLDTQSI >gi|237663594|gb|GG668924.1| GENE 297 272970 - 274346 1298 458 aa, chain + ## HITS:1 COG:L138484 KEGG:ns NR:ns ## COG: L138484 COG0531 # Protein_GI_number: 15673681 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Lactococcus lactis # 3 448 4 449 466 583 73.0 1e-166 MEGKKKFSLTSAILSVICVVFVAEAAAPVAAIGNSQFFWWIFLLIAFLLPYGLISSELGT TYIGEGGIYDWVTKAYGHRWGARVSWYYWINYPLWLASLAVMTPELLTTITGIKFSTPMM IIVELIFTWIVVWISFYPVSDSIWILNGAAVIKMVLAVLIGGLGLYVALTKGVANEFTLK SMLPTFDLRSLSFISVIIFNLLGFEVICTFADDMENPKKQIPQAIVAAGLVIAAIYIFSA FGIGVAIPTDQISTGSGMMDSFKLLTGSTEGWFIMLMAFLFLLTLFGNMISWSLGVNNTA CYAAENGDMPKFFEKRSKKNDMPIGAALMNGIVASVVIVLAPILPNQDLFWAFFSLNVVL FLLSYIPVFPAFYKLRKIDPDTPRPFKVNGKPGFLKVLVVLPMIMIIISLIFTAVPLDFS PAALNEKLPITIGAIIFILFGEVIIYVKKIKKGTKENG >gi|237663594|gb|GG668924.1| GENE 298 274339 - 275436 1009 365 aa, chain + ## HITS:1 COG:L136332 KEGG:ns NR:ns ## COG: L136332 COG2957 # Protein_GI_number: 15673679 # Func_class: E Amino acid transport and metabolism # Function: Peptidylarginine deiminase and related enzymes # Organism: Lactococcus lactis # 1 364 1 364 366 653 82.0 0 MAKRIVGSTPKQDGFRMPGEFEPQEKVWMIWPERPDNWRDGGKPVQEAFTNVAKAISQFT PMNVVVSQQQFQNCRRQLPPEITVYEMSNNDAWVRDCGPSFVINDHGEIRGVDWTFNAWG GLVDGLYFPWDQDDLVAQKICEIEHVDSYRTDDFVLEGGSFHVDGQGTVLTTEMCLLSEG RNPQLSKEAIEQKLCDYLNVEKVLWLGDGIDPEETNGHVDDVACFIAPGEVACIYTEDQN SPFYEAAQDAYQRLLKMTDAKGRQLKVHKLCCPVKNVTIQGSFKIDFVEGTMPREDGDIC IASYMNFLITNDGVIVPQYGDENDRLALEQVQTMFPDKKIVGVNTVEVVYGGGNIHCITQ QEPKR >gi|237663594|gb|GG668924.1| GENE 299 275448 - 276377 1120 309 aa, chain + ## HITS:1 COG:yqeA KEGG:ns NR:ns ## COG: yqeA COG0549 # Protein_GI_number: 16130776 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 3 309 4 310 310 300 53.0 4e-81 MSKIVIALGGNALGNSSKEQLAKAQTAAKSIVDLIEQGHQVVIAHGNGPQVGKIRLAFEE TSQSPEDVVPFPECTAMSQGYIGYHLQQAIDEELVARNLGEQPVVTLITQVVVDPKDPAF TKPTKPIGGYYDEETAKQLMAETGNVYQEDAGRGWRRVVPSPKPVDIYEKVSLRTLVDAG QIVIACGGGGVPIAYDGPVYHGVDAVIDKDFAAAKMAELIEADVFVVLTAVEHVFVNFGQ ANQQALTDVTVTAMQQYIEEDQFAPGSMLPKVEAAISFAESKPNRQAIIGLLELASEAIK GESGTRITQ >gi|237663594|gb|GG668924.1| GENE 300 276574 - 278160 1777 528 aa, chain + ## HITS:1 COG:lin0842 KEGG:ns NR:ns ## COG: lin0842 COG0154 # Protein_GI_number: 16799916 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Listeria innocua # 29 508 141 631 639 274 38.0 3e-73 MSKFFKVIGIIAVLLVIIGAAAYWFILKKFTPEAETPAMYNQERIVKTIEDQLKETDVQK ARTKAPLIIEKNITELQQAIANGALTYEELTAFYLDRILQFDQIDNGMNSISEINPQAIK EAKAFDQQTSQTPKKPLYGIPVTLKENINTTNMISSAGAYALRTFKPKEDAEVVKKLTEA QALILGKVNLSELANYMSMKAPSGYSSKHGQTLNPYGPLKITPSGSSSGSAASVTMNIGA FSLGTETMGSIVSPASHQSVVGFKPTHSSVSGEGVLPLAPSLDTVGPIARSVVDAAQGYN AFKKDTVPSIDSTKFTKNNLQGQRIGLLEMPSAEEEFATAKKALQKAGAEVIPVTPDMEG IDGGKVISNEFKFALEEFAKRYDLPFKKLEELIAYNQQDKKVRAKYGQDLLEADVKKKQP DKEVIQATIKKAQQTFDALLKKQQLDGYAFIDSEGTGLSAVAGYPELTVPLAKNSEGQPY GLTFTQTANKEQTLFEQAYSFEQSTKGRIVLSDNELLANSKKISRDEQ >gi|237663594|gb|GG668924.1| GENE 301 278718 - 279416 566 232 aa, chain + ## HITS:1 COG:PM1838 KEGG:ns NR:ns ## COG: PM1838 COG3201 # Protein_GI_number: 15603703 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Pasteurella multocida # 1 225 1 226 234 90 30.0 3e-18 MNKNFLVNDFKGWETRSYLFLALMVGVQLIAFAINPSNWITLVGGLAGIICVNLIAQGKV SNYIFGLISAVIIGYFGLVTRVYAEVLLQSFYIIMDITGLYAWLRASEDGSGQVTEVKVL KGIQWLYAFFTWLLIGVAAYILLGFVNDAQQTLDAITFSVSATGMLLMIKRYQSQFVFWL LGNIFSILLWFRAGTHAGGDYAIFVMYCMYTFNSIFGMFNWLKIKNKMEKNR >gi|237663594|gb|GG668924.1| GENE 302 279425 - 280069 833 214 aa, chain + ## HITS:1 COG:L93481 KEGG:ns NR:ns ## COG: L93481 COG1428 # Protein_GI_number: 15672477 # Func_class: F Nucleotide transport and metabolism # Function: Deoxynucleoside kinases # Organism: Lactococcus lactis # 1 213 1 213 217 293 71.0 2e-79 MAVIVLAGTIGAGKSSLTALIANRLGSEAFYESVDDNEVLPLFYAEPEKYAFLLQIYFLN KRFDSIKQALTHENNVLDRSIYEDSLLFHLNADLGRANETEVKVYDDLLQNMLQELPYAA HKKRPDLLVHIRISFPKMLERIKKRGRPYEQIETDPTLYDYYQMLNERYDQWYEDYDESP KIQIDGDKYDFVEDPEACQYVLALIEKKIEELER >gi|237663594|gb|GG668924.1| GENE 303 280419 - 280850 225 143 aa, chain + ## HITS:1 COG:no KEGG:EF0741 NR:ns ## KEGG: EF0741 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 143 1 143 143 246 97.0 2e-64 MGQIWFERILRWRKKAQRFLQGRYARFDELNRTLLLTSVVLALINIFTGYLWVRLLILIT VAYVYYRFFSKHIHPRLNENQRFILRKQRLMQKVHAFRKRHMTQKGYRYFKCPKCQQSLR APKGRGTIKVTCSNCQNQFIKKV >gi|237663594|gb|GG668924.1| GENE 304 280963 - 281349 637 128 aa, chain + ## HITS:1 COG:SP1558 KEGG:ns NR:ns ## COG: SP1558 COG4835 # Protein_GI_number: 15901401 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 122 5 128 128 92 44.0 1e-19 MEIKRQQEIVEAYHYDMRVPDSEVETDLRVSFSPIEVEEENYPENSSALVARLEFRIVFD EFVLSGAISQINHIIDRKIEKQEDISQEEVDELVRPLFSIVERLSYEVTEIALDRPGVQL NFQQSEEA >gi|237663594|gb|GG668924.1| GENE 305 281396 - 281731 466 111 aa, chain - ## HITS:1 COG:no KEGG:EF0743 NR:ns ## KEGG: EF0743 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 111 1 111 111 210 96.0 2e-53 MRKICWILSVNRDGAMLYVGSPANGGPWLFSNKEQQNIKAFFQPTYEIDFISYDVLSEKV PEAAFILYNEMLAPYLPEKITKVGQPIAYVDIATKNYEQFKKALVAKSSQE >gi|237663594|gb|GG668924.1| GENE 306 281896 - 282045 122 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMNVVILVPPYVFNDKYIKGSKGSRYSLSSKYPENSKLFPVIVLLYLIL >gi|237663594|gb|GG668924.1| GENE 307 282029 - 283420 1908 463 aa, chain + ## HITS:1 COG:BS_yhcL KEGG:ns NR:ns ## COG: BS_yhcL COG1823 # Protein_GI_number: 16077978 # Func_class: R General function prediction only # Function: Predicted Na+/dicarboxylate symporter # Organism: Bacillus subtilis # 1 461 1 460 463 424 57.0 1e-118 MTTFITVLVILAFIAVLFGFYQMQKKHLKFSTRVFSALGVGIVLGAIIQFAFGTDSKITT QSMEWIGIVGNGYVAFLQMLVIPLVFVSIVGAFTKMKESNKLGKISFNVLATLLGTTAVA ALVGIGTTLAFGLQGAKFTQGAAETSRIAELATRQDAIQDLTIPQQIVSFIPKNVFADFA GTRPMSTIGVVIFAAFVGVAYLGVRRKAPKEAEFFANLIDSLYKITMRIVTLVLRLTPYG VLALMINVVATSDFVAIINLGKFVLASYVALIIVFAIHMLILITLKVNPVTYLKKVFPVL SFAFTSRSSAGALPLNIETQTKALGVDDATANFAGSFGLSIGQNGCAGVYPAMLATIVAP TVGIDVFSLQFILMLVAVVTISSFGVAGVGGGATFASLIVLGAMNLPVAIVGLVISVEPL IDMARTAVNVNDSMVAGVLTSARIHELDRDVLNDRDVVLDANI >gi|237663594|gb|GG668924.1| GENE 308 283555 - 283935 553 126 aa, chain + ## HITS:1 COG:SA1340 KEGG:ns NR:ns ## COG: SA1340 COG0346 # Protein_GI_number: 15927090 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Staphylococcus aureus N315 # 7 120 6 121 123 83 41.0 1e-16 MFSNQVKIMLYVNNVEESSQFWQTFGFVEKEREEVDGTLVVEIAPSESAETIIVLYDLAF IQKHSPEVAGNTPSLMFASDDIIGLYKKMQEAGVTVGEMVQLPTGLVFNFADNDDNYFAV MGQESK >gi|237663594|gb|GG668924.1| GENE 309 284089 - 285255 973 388 aa, chain + ## HITS:1 COG:BS_pbpX KEGG:ns NR:ns ## COG: BS_pbpX COG1680 # Protein_GI_number: 16078758 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Bacillus subtilis # 74 379 85 386 391 140 28.0 4e-33 MRKRHAKKRHGGVNWLFIVCLLVVIGGSGYLIKTFFFTRDSQVSQESKVVLEEDRRSDNY ANLTKEIVAPDSGELDQKIQETNYIGSALIIKDDQVLVNKGYGFANFEKQQANTPNTRFQ IGSIQKSFTTTLILKAIEEGKLTLDTKLATFYPQVQGAGDITISDMLNMTSGLKLSAIPN NIVTDEEIIQFVKQNTIQVNKGKYNYSPVNFVLLAGMLEKMYQRTYQELFNNFYHKTAGL KNFGFFETLLEQPNNSTSYKWTEDNSYNQVLSIPAASFAHEFGTGNVDMTTGDLYWYLHQ LTSGHLVSTALLQKLWTSSQQSSYHGGIYVHDNYLRLHGVEAGQQALALFSKDMKTGVIL LTNCVNPAKYKELIGSLFHDVTNLTVKF >gi|237663594|gb|GG668924.1| GENE 310 285354 - 286064 713 236 aa, chain + ## HITS:1 COG:mlr4962 KEGG:ns NR:ns ## COG: mlr4962 COG4420 # Protein_GI_number: 13474144 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mesorhizobium loti # 32 225 92 285 307 167 45.0 1e-41 MKQSKNKQVVIGESTKKNIYLQDIEQETQAFILQNNPQLTAESMITLAELLNYRLDYMKQ LVANDSEKIQQLNELVVQHIKEDKLISNNMNEKMEKKLTFGQRAADTIAKFGGSWVFIGF FCFVLIAWIVINSTTLLGQPFDKYPYILLNLALSCLAAIQAPIIMMSQNRQEARDREQAN NDYKINLKAEVEINLLHEKMDYIINNQLENLVKIQNIQIELLGELQEQLAATSEKE >gi|237663594|gb|GG668924.1| GENE 311 286218 - 287168 1280 316 aa, chain + ## HITS:1 COG:SA2481 KEGG:ns NR:ns ## COG: SA2481 COG1054 # Protein_GI_number: 15928275 # Func_class: R General function prediction only # Function: Predicted sulfurtransferase # Organism: Staphylococcus aureus N315 # 1 308 1 308 318 495 75.0 1e-140 MKYQVLLYYKYTTIEDPEAFAKEHLAFCKSLNLKGRILVATEGINGTLSGTVEETEKYME AMQADERFKDTFFKIDPAEEMAFRKMFVRPRSELVALNLEEDVDPLETTGKYLEPAEFKE ALLDEDTVVIDARNDYEYDLGHFRGAVRPDIRSFRELPQWIRENKEQFMDKKIVTYCTGG IRCEKFSGWLLKEGFEDVAQLHGGIANYGKNPETRGELWDGKMYVFDDRISVEINHVDKK VIGKDWFDGTPCERYINCANPECNRQILTSEENEHKHLGGCSLECSQHPANRYVKKHNLT EAEVAERLALLEAVEV >gi|237663594|gb|GG668924.1| GENE 312 287422 - 287760 338 112 aa, chain + ## HITS:1 COG:no KEGG:EF0750 NR:ns ## KEGG: EF0750 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 112 1 112 112 189 95.0 3e-47 MKIIRGFSLVCLGLLIIGLQTKSVMAEENNYESNGQASFYGTYVYENEKESNDVADTQQS EEQGRNNLAASGQAVLPKTGESENPLYSLIGVSLLGVVIYLINKMKREKELI >gi|237663594|gb|GG668924.1| GENE 313 287760 - 288491 836 243 aa, chain + ## HITS:1 COG:no KEGG:EF0751 NR:ns ## KEGG: EF0751 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 243 1 243 243 423 99.0 1e-117 MKKTILLTSATILLGVGFQAINASAAETFPKEYNTEGTITFEAGDNEITPPVDPENPDPT DPVDPIDPPGPGTGGALSIDYGSKFKFGTQKISTADQTYYAAPDEMKDGSKKPTYVQVTD KRGTLAGWKLTLSQPEQFKTATGEELVGAQLTFTKAEAASMVDEKYKPTEVSSTISLTPG VNNNLAMNAKKETGVGTWVYRFGSNEATNKEAVQLFVPGKSVKLAQQYSTKLVWALEDTP ANN >gi|237663594|gb|GG668924.1| GENE 314 288508 - 289287 957 259 aa, chain + ## HITS:1 COG:no KEGG:EF0752 NR:ns ## KEGG: EF0752 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 259 1 259 259 456 99.0 1e-127 MKKQFTGIVLCSTFAVAGWSLQAKAEEPKEYRSNGLVEFIPNVDPTEPVDPENPDPEKPV KPIDPTDPEGPNPGTQGPLSIDYASSFDFGKNRISNKDQVYFARAQQYQENQKDTPNFVQ ISDNRGTNSGWTLTVTQKEQFKATKATLNSQLTGAQISLANPTVNSNAQNVVKPEATNKI ALVPGTASLVAAAKQGTGAGTWATYWGKVEVVAERDETNTVHNVNVTKDVALSVPGSTPK DAVKYQTKLLWTLTDVPGI >gi|237663594|gb|GG668924.1| GENE 315 289307 - 291406 1926 699 aa, chain + ## HITS:1 COG:no KEGG:EF0753 NR:ns ## KEGG: EF0753 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 699 1 699 699 1274 98.0 0 MRNKQSLVFLASSLFLLLLAPITSEAISNPSTNINEVNREIVEESANDQATSAPSHSETL EQEPSLETTTTTDNHPAETDQSTATLEPSKQQKDDDNSATESAIVEPQPRMLAAPYATSL PDDPNIIPIDKVFQEPIGNATSILEGGKLLQLNPAVKSQKGAIWSKKPISLLSDFTFKSY LYLGNEYANAGDGMTFTLTNDPRMSTTPQEVIGSPGMGIGAYSTKAGQPYVRNALSIEFD TYKNTGSSNRMDRKISQDKGNGHLAFVTPKANNNNYTGEHSGVTVAPTYLSNGTWRMLTV HWNAAAKALTYDLEGVGTNTYVVSDLNAQFGATTVYWGFTSSTGGKYQENALAMTQIHTN VTSQAALSVNGQEFSSAVEAVKNDQVILRNTLNIDNDFIEDRQPQVSIDLPDELAYEENS LTIDGKKVAAKDLTQTGNHLTIALNDYLVLKKDMMIELKTTLQDNTPEKVLTMNFDYYEE GTLLQKSNNVTITIPKPTEKTVTVFYKDAEGKDIAPPKSVTGKIGAPYQEKPLDISGYVF TKDSGNAEGTMTEETKDIYFYYRLGELYFKEAPKQITFGTEKIRNQPLIKLGHPTEGLKV VDERNANNWRLQLKQTQPLTNDSIVMPDVFSFVSTAGSSQITNEAITLLESNQKGETDLT ALLDESKQQGIQINVPVAYQRVGTFKARLSWALEDVPGN >gi|237663594|gb|GG668924.1| GENE 316 291429 - 292169 903 246 aa, chain + ## HITS:1 COG:no KEGG:EF0754 NR:ns ## KEGG: EF0754 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 246 1 246 246 391 100.0 1e-107 MKKVTTVCLSTFILGSLGMTSQAFAEDGGSYTSNGIVEFTPSEEPTNPVDPTDPTNPVDP IDPTDPEGPNPGTNGPLSIDYASSLDFGVQKITSKDQTYFAATQKYKTVGATDEVKEGPN YVQVTDNRGTEAGWSLKVKQEGQFKSTSGKELTGAAITFKNGNVVTASDSGKPTGPATIT LNSDGSQSDVMSAAKGNGAGTYLFDWGTDATTAAKSIELTVPGSTTKYAEKYATKLTWTL TDAPGN >gi|237663594|gb|GG668924.1| GENE 317 292245 - 293339 998 364 aa, chain + ## HITS:1 COG:no KEGG:EF0755 NR:ns ## KEGG: EF0755 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 364 1 364 364 569 98.0 1e-161 MNRKKQRFLFFPILLILLALVPSNGFASEFNFAVTPIPSEKQVDKEKTYFDLLLEPNEET ELKVNLRNDTDKEVKVGISINSAITNSNVIVEYGENKGEKDQSLAFDIKDYVQYPSSVRL KPKSEQTVSINVKMPNTPFDGVLASGITFKEETSDEGKRQDDKSQGLSIKNEYSYVVALL MQQNKKKVEPNLLLKKVSPGQINARNVILVNLQNDQKTYINQVAFSAEITKKGHEEVLYK EEKANMQIAPNTNFSVPIALKGQPLKPGDYHLSMTVVGNKDAAGSFKKSINNESISFRNQ WQFEKDFTINGEVAKELNEKDVTLKENHSNLYLLIGLLLLLIVILIIAWLIWRKKKQEQN EREI >gi|237663594|gb|GG668924.1| GENE 318 293541 - 293990 286 149 aa, chain + ## HITS:1 COG:no KEGG:EF0756 NR:ns ## KEGG: EF0756 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 149 1 149 149 211 97.0 5e-54 MDKYKHLLLWSTLLLSFFQVNNVQAAEERNPIYNPTNPTEEIYPIENTGTPEKMEETNES TITSETQAEESNEDVSKKEVKTNNPKTNEERPSSKKSQHQVFFTDELFDASHITIVPNST GGAGTEGQNTFYLNFIRELVGTAIYGRKN >gi|237663594|gb|GG668924.1| GENE 319 293994 - 295442 918 482 aa, chain + ## HITS:1 COG:no KEGG:EF0757 NR:ns ## KEGG: EF0757 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 482 1 482 482 878 99.0 0 MMNYEIFLNKEDQRSYSLLRHLEESPTLSGTFIALREELSMSNFLVKKTLEKLKADIDNL KLSDSLTLVVSDVDVTLEIDGNYSSKLLLTKYLTESLSFKLVLSYFRGNYSLTKFAECNH VSTSVAYSTLQRLKKALKEYQIYFSKREIVGNQKAISFFLYKLFTLSNQPISELYSVKVY NEAKRVLQSVELNYTFTTYERRNFFHYLAIMINNEGRAVEGIDTRALNTFSEELIKKSQV AWALSSKSLTYTIVFFLYLHGKLEKKYVIHEDPTIESLTRVFIGSFEKAFNCLEESTRNT LEEGLAIIHFNVIYFPINMFDDFEMDLQFFKQTYPEFYFYLIEYIRWLTAKHKKIAKANH CLFFNYLLLLINHVPVHLIAEPAKVLIDFSYGKEYNQFIKKNLSVYVNLNVEIIDPLSDT LPDVVITNLNNLYQEEQSKVMVWLDPPRSIDWVNLTQSLLTIQEEKYQQQKESTKTSGDP IE >gi|237663594|gb|GG668924.1| GENE 320 295552 - 297456 2119 634 aa, chain + ## HITS:1 COG:BH0744 KEGG:ns NR:ns ## COG: BH0744 COG2217 # Protein_GI_number: 15613307 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Bacillus halodurans # 22 630 32 636 637 453 43.0 1e-127 MSKQTGAHTHEEKGKNVPVILFFTGLALFFIGLFLGNMLLVKNILFSLAAILAGYHIIGE GFGDTYRDTKNNRKFSPNIHLLMTLAAVGSALMGSFEESALLILIFAAAHFLEDYAQGKS QREITKLLNLNPTEARLITDDGSIQTVSVEQLKIGDRVQVLNGAQIPTDGVVIEGSTAVD ESSINGESIPKEKNSGDPVFGSTMNGSGTIVVEVTKDSSETVFAKIVQLVNQSQENQSEI ASKIKRFEPKYVTLVLAVFPLIVLGGALLFQLTWAESFYRGLVFLIAASPCALAASAVPA TLSGISNLAKQGVLFKGGSFLSNLAEVKALAFDKTGTLTKGKPEVTDYLFVDGLEDRQDE LVAVLTNMEKKSNHPLATAIVNRFEAETTALNLEVENIVGVGLVTTIADTTFRIGKPSSF EQVPTIIEKQTTKLASEGKTVVYFAENEQVIGLVALMDVPNEEAMNAIHYFKSQNIETTM ITGDAKLTGEAVGRLVGVDQVYANVLPEEKSAIVDQLKREVGMTGMVGDGINDAPALVNA DIGVAMGDGTDIAIDVADVVVMKNDLSKLGYAHRVSKRLNKIVQQNIVFSMLVVATLIIL NFLGIANIAFSVLIHEGSTLVVIFNGLRLLVNTK >gi|237663594|gb|GG668924.1| GENE 321 297492 - 298211 688 239 aa, chain + ## HITS:1 COG:BH3225 KEGG:ns NR:ns ## COG: BH3225 COG1285 # Protein_GI_number: 15615787 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Bacillus halodurans # 11 213 1 220 232 97 31.0 1e-20 MNSLKMIELSLTDVVIRMALAVVFGALIGLERSIKRKGFGISSNAILCLASCTISILQIQ SVDILVDVVKQNSALASIISMDITRYGAQVISGVGFLGAGIIVFRERKVSGLTTAVMMWN VTIIGLVIGMGFLTIAFINLVATLLVLALAHFKRKTPLKRLQLIVKMKEPMIKESRLHEQ LQASLEKGERLVELTLESEQEAVTAKISYVGKEDFWHSNLHHLLKEKGNVQSVSVTETI >gi|237663594|gb|GG668924.1| GENE 322 298259 - 298996 296 245 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 219 1 221 223 118 33 3e-25 MTEKILVEHLVKKYGDNTVLNDINVSINEGDVVCVIGPSGSGKSTFLRCLNQLEEASSGD IIIDGANLTDKNTDINQVRQHIGMVFQHFNLFPHLSILENIVLAPTDLGRLSKDEAEKKA LELLERVGLADKKDAYPDSLSGGQKQRVAIARALAMNPDIMLFDEPTSALDPEMVGDVLG VMKDLAKQGMTMVIVTHEMGFAKEVANRVMFIDGGNFLEDGSPEQVFENPQNPRTKDFLD KVLNI >gi|237663594|gb|GG668924.1| GENE 323 298998 - 301166 2612 722 aa, chain - ## HITS:1 COG:L165_1 KEGG:ns NR:ns ## COG: L165_1 COG0834 # Protein_GI_number: 15673741 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Lactococcus lactis # 1 521 1 507 509 453 45.0 1e-127 MKRKHFLLSFFVMMVTLLTFISGTSAHAEGKKYTIGTDLTFAPFEFQDSKGKYIGIDVDL LDAIAKDQGFEVDLKPLGFDSAVQAIQSKQIDGMIAGMSITDERKKSFDFSDPYFDSGLQ LAVKKGNDKIKSYDDLKGKTVAAKVGTESANFLEKNKEKYDYTIKNFDDATGLYKALENG EADAIVDDYPVLGYAVKNGQKLQLVGDKETGSSYGFAVKKGQNPELIKKFNAGLKNLKDN GTYDKILNNYLATGDETNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGID VDLVKRAAELQGFTVEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKKAFDFSVPYFDS GIQIAVKKGNDKIKSYDDLKGKKVGVKIGTESADFLEKNKKKYDYSIKYLDTTDALYSAL EIGEVDAMMDDYPVIGYGVAQNQPLATPIPREKGGSYGFAVKKGQNPELLEMFNEGLKEM KRTGEYDKIIGTYVKDGNEAKEETADESTFVGFMQNNWKQLLHGLWMTILLTLISFVLAL IVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPGVLGFNIPVFIAGII TLTLNASAYISEIVRGGIKAVPVGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFINQF VISLKDTTILSAIGLIELLQTGKIIVARTLQSTMVYFVIALIYLILITSLTKLAKNLEKK VN >gi|237663594|gb|GG668924.1| GENE 324 301445 - 303442 2172 665 aa, chain + ## HITS:1 COG:SP1238 KEGG:ns NR:ns ## COG: SP1238 COG0556 # Protein_GI_number: 15901100 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Streptococcus pneumoniae TIGR4 # 1 663 1 660 662 994 77.0 0 MIERETSNTFHLASKYEPAGDQPAAIAELVDGVKGGEKAQILLGATGTGKTFTISNVIQE VNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSI NDEIDKLRHSATSSLLERNDVIVVASVSCIFGLGDPREYSQQVVSLRVGMEMDRNELLKS LVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHALRVEFFGDEIDRIREVDALTGEIV GETEHVAIFPATHFVTNEEHMEHAISQIQEELEARLKVLRSENKLLEAQRLEQRTNYDIE MMREMGYTSGIENYSRHMDGRQEGEPPYTLLDFFPDDFLLVIDESHVTMPQIRGMYNGDR ARKQMLVDYGFRLPSALDNRPLRLEEFEQHVNQIVYVSATPGPYEMEQTETVVQQIIRPT GLLDPEVEIRPIMGQIDDLVGEIHERIEKDQRVFVTTLTKKMAEDLTDYFKELGLKVKYL HSDIKTLERTEIIRDLRLGEFDILIGINLLREGIDVPEVSLIAILDADKEGFLRSERSLV QTMGRAARNAEGKVIMYADKITDSMQRAMDETARRRAIQEAYNEEHGIEPKTIIKEIRDL ISISKTADKDETVVQLDKSYEDLSRQEKADLLMKLEREMKDAAKALDFETAATLRDTILE LKAAK >gi|237663594|gb|GG668924.1| GENE 325 303560 - 306379 2925 939 aa, chain + ## HITS:1 COG:SPy1825 KEGG:ns NR:ns ## COG: SPy1825 COG0178 # Protein_GI_number: 15675653 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Streptococcus pyogenes M1 GAS # 4 939 3 941 942 1501 78.0 0 MANDKIVIHGARAHNLKNIDVTIPRDKMVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS AYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLFARVGHP ICPNDHIEITSQSVEQMVDKVLELPERTKIQILAPVVVKKKGQHKKVFEMIQREGYVRMR VDGETYDVSEAPELEKNKKHDIAIVIDRIVVKEGIRSRLFDSFEAALRLAEGYAIVDVIG QEEMLFSEHYACPYCGFTVGELEPRLFSFNAPFGACPDCDGLGVKLEVDKDLVIPDPTKT LREGAIVPWNPISSQYYPQMLEQAATSFGIDMDTPFEELPAEQQEIILNGSGEKNFHFHY ENDFGGVRDVEVPFEGILKNIKRRYHETNSDFTRDQMRLYMTELTCRSCHGYRLNPQALA VKINGTHIGEVSELAIKNAVQFFEGVSLSEQETTIARPILKEVEDRLTFLKNVGLDYLTL SRAAGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIDSLKKMRDLGNT LIVVEHDEDTMMASDYLIDVGPGAGHLGGEIVAAGTPEEVAKNPHSLTGQYLSGKKVIPV PKERRKGNGKAIKVTGASENNLKNVSVEFPLGEFVAVTGVSGSGKSTLVNQILKKALAQK LNRNSNKPGKHKSITGYEAIEKIVDIDQSPIGRTPRSNPATYTSVFDDIRDLFAQTNEAK VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNSETLEVHYKG KNISDILDMTVEDAVEFFKHIPKIHRKLQTIVDVGLGYVTLGQPATTLSGGEAQRMKLAS ELHKNSNGKNFYILDEPTTGLHTDDIARLLLVLERLVEAGNTVLVIEHNLDVIKSADHVI DLGPEGGDGGGTIVATGTPEEVAKVKDSYTGYYLKRVLK >gi|237663594|gb|GG668924.1| GENE 326 306551 - 307345 824 264 aa, chain + ## HITS:1 COG:no KEGG:EF0764 NR:ns ## KEGG: EF0764 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 188 1 188 188 316 98.0 7e-85 MKNKKITTSLLTAGMVLAIGITPFVHSNTMEAATLISQSDHEKVMSFTKKDLKEATGIQL EPATVQAVHQELKQQITWEILGYSTIDAQNIATRFTQNTYQALGILTDIANHSDLQLKVI TINNPYLATAKIGTFKWETVTPEVGGDHETADNELNTPTPTVASLQEIDVEIEYDENEIE FTYEIKSNGTIEATYEDEFADLELEGKAAQDKIMTLLDGLSIKTATNEQIKEHITKKLAV NEQVKQFEFEANFTDKTEIEFVLK >gi|237663594|gb|GG668924.1| GENE 327 307511 - 308398 1043 295 aa, chain + ## HITS:1 COG:lin2617 KEGG:ns NR:ns ## COG: lin2617 COG1660 # Protein_GI_number: 16801679 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Listeria innocua # 3 290 4 290 291 374 63.0 1e-103 MPENLQLVIITGMSGAGKTVAVQSFEDMGYFCIDNLPPSLIPKFWELIKESGKVTKIALV IDLRSRTFFREIQDMLVELENTNFIDTTILFLDATDEELVSRYKETRRAHPMAMDGLVTE GIRKERAMLEEIKADAQLVIDTTDLSPRQLRERLNKELATRETHEFRVEMVSFGFKYGLP IDADIVMDVRFLPNPHYIDELRPLTGMDQPVYDYVMGFPETDEFYTKFIDLLRTVLPGYK KEGKSSVTIAIGCTGGQHRSVALTERVGAELKEEDYHVNITHRDRLKRKETVNRS >gi|237663594|gb|GG668924.1| GENE 328 308398 - 309393 929 331 aa, chain + ## HITS:1 COG:SP1565 KEGG:ns NR:ns ## COG: SP1565 COG0391 # Protein_GI_number: 15901408 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 6 326 1 321 325 428 64.0 1e-120 MKTYRIRKPKIVVVGGGTGLPVILKSLRNQSVDITAVVTVADDGGSSGELRSSINNMTPP GDLRNVLVALSDMPQLYEDIFQYRFDKSDSHFANHAIGNLIIAAVSEMRGSTYEAIQLLS KMMHVDGRIYPSSERPLTLHAVFKDGSVAVGESKIALDRKTIDHVFVTNTHGEEQPRAAR KVVKAIEEADMVVLGPGSLFTSILPNLVITEIGEAIKQTAAEVVYICNIMTQKGETEHFT DADHVRVLNEHLQAQFVDTVLVNTEKVPENYMDPEIYDEYLVQVKHDFQGLREEGCRVIS TDFLELRDGGVFHDGEKVVEELFRIVFGTKY >gi|237663594|gb|GG668924.1| GENE 329 309427 - 310362 1032 311 aa, chain + ## HITS:1 COG:lin2615 KEGG:ns NR:ns ## COG: lin2615 COG1481 # Protein_GI_number: 16801677 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 307 1 308 323 376 64.0 1e-104 MSFASDVKKELTGLEVHREHAKAELAALIRMNGSLSLVNQQFVLNVQTENAAIARRMYSL LKDHYHAQAELLVRKKMKLKKNNVYIVRLKQDTQKILADLDIMDGVVFNGNVSNEIMGNA QKMRSYLRGAFMASGSVNNPETSRYHLEIFSIYEEHNNDICKMLNYYDLNARTLGRRNGY ICYLKGAEKIADFLTLIGATNSMLKFEDVRIVRDMRNSVNRLVNCETANLNKTIDAASKQ IENIQFIESTVGLTSLPEKLQEIAELRLEYPEVSLKELGEMIPSGAISKSGINHRIRKIN EFAEKLREKSA >gi|237663594|gb|GG668924.1| GENE 330 310596 - 311519 1056 307 aa, chain + ## HITS:1 COG:no KEGG:EF0769 NR:ns ## KEGG: EF0769 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 307 1 307 307 565 99.0 1e-160 MVQRLISANASEIKRMSKEELFQSIKASEGRVILSENVVVHPSVAGDITCAEMSKAYGAD MILLNVFDVNQPIVVAAYEGQYTAETCVPNDEVVHRLKELVGLPIGMNVEPVDENLDLAS TRVSIEPGRKASAATFKKANELGLDFILLTGNPGTGVTNDLIAKNVALAKKHFDGIIIAG KMHSSGVDEPVVSLKSAEQFIEAGADIVLVPAVGTVWGITDQQVKEVVDFAHSKGKLVMS AIGTSQESAQPEVIQTIGIRNKILGVDIQHIGDANMGLVGIENIKELSDAIRGKRHTVAR MARSINR >gi|237663594|gb|GG668924.1| GENE 331 311632 - 312150 582 172 aa, chain + ## HITS:1 COG:lin1051 KEGG:ns NR:ns ## COG: lin1051 COG1651 # Protein_GI_number: 16800120 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Listeria innocua # 1 167 1 167 176 204 57.0 6e-53 MDISVIDATKVNTETGLHIGESNAPIKMIEFINVRCPYCRKWFEESEELLAQFVKSGKVE RIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFATQDEWGNLTLEEVATYAEKN LGLKEQTDATLVSAVIAEANAAHIQFVPTIIIGEHIFDESVTEEELRGYIAS >gi|237663594|gb|GG668924.1| GENE 332 312263 - 312865 839 200 aa, chain - ## HITS:1 COG:lin2612 KEGG:ns NR:ns ## COG: lin2612 COG0740 # Protein_GI_number: 16801674 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Listeria innocua # 1 196 1 196 198 316 81.0 2e-86 MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDI YLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEI MIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQA KEYGLIDEVMENSSALNLAS >gi|237663594|gb|GG668924.1| GENE 333 313062 - 313580 464 172 aa, chain + ## HITS:1 COG:no KEGG:EF0773 NR:ns ## KEGG: EF0773 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 172 1 172 172 308 100.0 5e-83 MFVFIAGMVGVIVGALIVTASAALHSSYKERKEVRYRELEHLVKEIESLNLLNKKVKEIL QKRELYIDRSIEYLSMDDCFISIDDFIYLESFSAQNNFYLPTYLIEEFFKKIAHRKVILT ASEVAEMGGHTYKGGRVILENFSDEILAIIEDKKRKMQRLSNEPLHYFKAIK >gi|237663594|gb|GG668924.1| GENE 334 313601 - 314005 573 134 aa, chain - ## HITS:1 COG:no KEGG:EF0774 NR:ns ## KEGG: EF0774 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 134 1 134 134 244 99.0 1e-63 MNEWPHQLMTLLTPLFELCILGLNVFSIIVLVWGVCLAGKDFIKSERQNQSRFTLTKMNT FIKNFLGSYILLSLEILIAADIIESIVKPTFQDILKLATLVIIRTVISYFLHKEIEDTMT DMEQQEKEPDTPKN >gi|237663594|gb|GG668924.1| GENE 335 314470 - 316338 2226 622 aa, chain + ## HITS:1 COG:no KEGG:EF0775 NR:ns ## KEGG: EF0775 # Name: not_defined # Def: anchor protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 619 1 619 962 1051 97.0 0 MFKKATKLLSTMVIVAGTVVGNFSPTLALAEGAVKAGDIEGMTNTVKVKDDSLADCKRIL EGQAAFPVQAGETEPVDLVVVEDASGSFSDNFPHVRQAIDEVVKGLSDQDRVMLASYRGG KQFMFPDGKTKINSADYDMNVRVDTQLTHDKSKFVSGFGDVRTYGGTPTAPGLKLALDTY NQTHGDLTNRKTYFLLVTDGVANTRLDGYLHKTNTNDSINEYPDPRHPLQVSVEYSNDYQ GAAAEVLALNQEITNQGYEMINAYWESVESLSSVNSYFDKYKTEVGPFVKQELQQGSSTP EDFITSQSIDDFTTQLKQIVKDRLAQSTPATASLTIANQFDIQSATATDDAGNDVPVQIN GQTISATSTEGYVGNITIHYEVKENTAIDAATLVSSGTMNQGTIAKEFPEATIPKNDNAH ACDVTPEDPTITKDIENQEHLDLTNREDSFDWHVKTAFGNETSTWTQASLVDDINQLLDI QKVVVTDENGKDVTANGKVTQENNKVTFEMNKQADSYDYLSGHTYTMTITTKIKTDATDE ELAPYIQQGGIPNQADLNFGNEGDVLHSNKPTVTPPPVDPNITKDVEGQDHLDLTNRDQE FKWNVKTAFGNETSTWTQALAS >gi|237663594|gb|GG668924.1| GENE 336 317481 - 317762 157 93 aa, chain + ## HITS:1 COG:no KEGG:EF0775 NR:ns ## KEGG: EF0775 # Name: not_defined # Def: anchor protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 93 870 962 962 125 98.0 4e-28 MLHSNKPTVTPPAPTPEDPKKPEPKQPLKPKKPLTPTNHQAPTNPVNFGKSASKGIHLPM TNTTVNPLYMIAGLIVLIVAISFGITKNKKRKN >gi|237663594|gb|GG668924.1| GENE 337 317787 - 318170 371 127 aa, chain + ## HITS:1 COG:no KEGG:EF0776 NR:ns ## KEGG: EF0776 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 127 1 127 127 204 100.0 6e-52 MNKKISFSLLILLLSLLVGFTFIPHKKELSFNEYQEKKHSGETFYVVLKKKNCSDCQDFE KLLQAPKQVYYVELTNKETMKEWSTFIRENKVLHVPSMFKIDNGHLKKIDGEGDANQLFA NYQKITK >gi|237663594|gb|GG668924.1| GENE 338 318337 - 318846 431 169 aa, chain + ## HITS:1 COG:no KEGG:EF0778 NR:ns ## KEGG: EF0778 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 169 1 169 169 155 95.0 4e-37 MIELILLLSVILLGLLIGNKRVDKWLFLKALLLFSVMLSVSILISVAMYLLLTIGVASVI GEKLESLFLLGIVVIISTSLLLYFLLNLTTKKIVLPIALMKIIEYYIQWVLIYVTIYQVI FDQFIVSSEVKNTLKGTINEPVAIIIVILPSFISIWIAVVLFRIRMEEL >gi|237663594|gb|GG668924.1| GENE 339 318876 - 320663 1573 595 aa, chain + ## HITS:1 COG:L58914_2 KEGG:ns NR:ns ## COG: L58914_2 COG0584 # Protein_GI_number: 15673979 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Lactococcus lactis # 344 583 1 240 249 271 56.0 2e-72 MSAWQTFKNGTRQFFKDILQYLWLFFTLNVLLLLVGGAFSWATSNALKTQGIPYLSFNNL NLLLEKPLALVLLILLLLLFLGAVFYQFTFLLLGIFQIRQDHRFHFKGVTKASFKVLKKQ GARSWLFFFGYFVVIVPFGNLIFQSNLLTKFVIPDFIVEFLSQRIPYLVGLLAFGLLVWY LAIRFIYTLPLMILERKKAGEAVKASWSMTNKRLWFIIRNIAFVTIAVFVSTYVIYVLLY LLQLKLDTLSDTISLLGGILNLTVVQFLQFVSNAWLSVLLINFLYTQLNVQAETTTKVAF DKETKRNKLVTIGMGLGLFTIFGGYIIFNAVYLTGLLESKPLIISHRGVTNSNGVQNTIP AMERTIKFKPDYIEIDVQETKDHQFVVMHDANLKELAGVDGTPQEFTLAELTKMIVKENG QEAPIASFDDYLAKANQAKQKLLVEIKTSKQDSQGALSNFIEKYERPLIKNNHQVQSLDY NVIKAFKKAKSKVKVSFILPYNFTFPETQADLYTMEATTLNDTFILKADQQKKAVYAWTV NDSEVLSKMLFMDVAGVITDDLELVNEEVNDFEKNPSYADRILHYIFMLPSVTSQ >gi|237663594|gb|GG668924.1| GENE 340 320689 - 321096 426 135 aa, chain + ## HITS:1 COG:no KEGG:EF0780 NR:ns ## KEGG: EF0780 # Name: not_defined # Def: MutT/NUDIX family protein # Organism: E.faecalis # Pathway: not_defined # 1 135 1 135 135 263 100.0 2e-69 MKKEFSRVLLKNQSDEILILKDRPDTWNFPGGKQELGESALECAIREMKEELAVEITELE EIFTGPLVFDSIVWQGHFYFAKQAQGKVTLNEPNKIKGVQFIKRFEEVNFSPGLAPLFDY LARSDYLKLNKTNWK >gi|237663594|gb|GG668924.1| GENE 341 321285 - 322727 702 480 aa, chain - ## HITS:1 COG:no KEGG:LC705_01848 NR:ns ## KEGG: LC705_01848 # Name: not_defined # Def: transcriptional antiterminator # Organism: L.rhamnosus_Lc705 # Pathway: not_defined # 1 474 1 484 496 132 23.0 3e-29 MRALLSDSFQRKLTVIDFLYDNPYQKLTTIQEYFQYNHTTLLNDLADLNSIISPCEIIKT ANLEYFLHFPNNTNIEYVYSCFLQVAPEFRLLQQLIFNTYPSTEALAEALYVSNSTVKRM ITRINQILLEKFSFKIQTSPLTFSGDETKIINFFIAFLKESYVTSTQLLSKEQNIFFNQL FEESLPILKFAGNIDIDKFSFYVYSIVLRFKQAGSLAFFPENRQLYSNLADYSHLFDRYF SIKTDTSFFHSLESIFFNGHYLKSYKELVFLSKENQQVLTRKRQIEQLLDYLATALAISN PNYHAIVLYLYNLSVSDYGEAFILFPKYKFFLENLTHHYPYFYDKCVPFLKKILNDKSID RFYEFIYHLIIRWDELQASLNKLPPKMKTGIYFFTDIEHNLFMKKFFTERFRDILAIDNL FTLDSSVDLKEVVASYDLLLTNIPIPDVVERNIICCSLFPTNAQLEEIASYYSKWLTTTT >gi|237663594|gb|GG668924.1| GENE 342 322890 - 324365 833 491 aa, chain + ## HITS:1 COG:no KEGG:SDEG_1738 NR:ns ## KEGG: SDEG_1738 # Name: not_defined # Def: trans-acting positive regulator # Organism: S.dysgalactiae # Pathway: not_defined # 10 483 8 484 509 67 22.0 1e-09 MSKNFITYEKFEQFLEKQDKNVYDILKFIASSEKVSLTYEELYEITNLSVQTLYELLRKF IEILPVIDKNQSLSVHIESYNCYSFHKKPSFTLDYYFAVFLRRSQYYRILIDLLYGKQRT IEQYTEKLFISESSVKRTMKQLRGILDGFYLKIIKKNKKYLLVGDEEKIRYFYFILFKIS SNAPDDLYSEESIKRIQTDFQKIYPNITQNTLENFLYFLHVTKIRMAHDFRLQAKENHFE VINRLFTLKDFETQLGKYIFFNDAMNNQVELECLYFFISTDELLTIETILSVSAYLSPAI LSEEAFLIGNTILYQLSQFFDIKFSPEEYFYLGANFYLKIKKSEIFYYYHFEKKYLDKPI EKYINKLFSDFSKYFERNTGEKLPLPVDYLQLILLEIFLEKDKKISVLVYSALGDRDKVR IEKKLQKFITIPIRFVNRLEENPQLIISNRYLKSNQKIPIFYIRNYFMNTELNNISKFVE ELYFLEKGYNQ >gi|237663594|gb|GG668924.1| GENE 343 324362 - 325054 515 230 aa, chain + ## HITS:1 COG:CAC0564 KEGG:ns NR:ns ## COG: CAC0564 COG0745 # Protein_GI_number: 15893854 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 73 229 76 232 233 60 27.0 3e-09 MKVNIICIGNNLNSIYKDEIEEYFAESNHYSEKELKNIKPNKEEIYLIYHSNEVENDLKY EVIIALCKNFKVPIFVLSDCLSCSEQIIYLNLGVMGFLTTKFTPANIKTILANNYSFFQE LNQQTEAIEAPLNFQINSQERSLRIGDSKQVQLTRLEFKFFNSLYHKKGHVVNYEEIAKN IWEKETFEKKDTVRLSIIAKHVREKLREIAGNSDYIYTVRSIGYKFKESC >gi|237663594|gb|GG668924.1| GENE 344 325067 - 326095 687 342 aa, chain + ## HITS:1 COG:no KEGG:LSA1819 NR:ns ## KEGG: LSA1819 # Name: not_defined # Def: cell surface protein precursor # Organism: L.sakei # Pathway: not_defined # 28 288 32 293 293 163 33.0 8e-39 MVKKISLFMMIFMTIAGYGLSVCAEEDQAIPYSATAIIPENQLNKNVSYFDLLVSKGEKQ IVTIQINNSSDKKIKIKITPNTAKTTRNGTIDYSGMDLKNTDNLKYQFDKLVSKEQVVSI EPHTKKNVDFVLSIPREEFPGIILGGFYIREEKDEQLVQSLNKTVQITNEFSMVIGCQLR MNEEKVPKDFQLNKVKLGTYGGYFSIISSISNVSPSLVSFYSVEKTIQDMNRKEIAKFKK EGISIAPNSIYEAPDKIEENKLKPGKYKMLLTIESRDKKNKWRLSEDFEITSKEKKGVQN EAIPSTKISNRKIIYLVTCIWFGLVILLLMILLLRKRRNRDR >gi|237663594|gb|GG668924.1| GENE 345 326143 - 326802 613 219 aa, chain + ## HITS:1 COG:no KEGG:MPTP_0084 NR:ns ## KEGG: MPTP_0084 # Name: not_defined # Def: extracellular protein # Organism: M.plutonius # Pathway: not_defined # 1 216 1 225 226 89 36.0 1e-16 MKKTILFSMLVGSTLFLGKEALAVTPAISEGTATLQALTEEEAGPVTPQITDPENPNGTG QTGLLTLDAVPSFDFKGEGLSGQFMDTLTPTQIENGYEKNAQITDRRGTGAGWNLSLNIS SFKSADVALKGVNITIPVSLEAGTDNTSVAPSIVKSISGIVDPVSGFDVGTVMSANVGEG YGTWISKFSGASLNIADGNSAGSYKSTFTWTIAQVPIGE >gi|237663594|gb|GG668924.1| GENE 346 326900 - 329242 1829 780 aa, chain + ## HITS:1 COG:no KEGG:LPST_C2826 NR:ns ## KEGG: LPST_C2826 # Name: not_defined # Def: extracellular protein # Organism: L.plantarum_plantarum # Pathway: not_defined # 30 347 48 392 716 103 31.0 2e-20 MKCNLIKGFSLLCLLAYFLIFSSSVQADETIPNRVSLDGIFTTNLGVSNNSSEVVDDVGV ITNGLPNQVGALWSTEDNLLDFKKDFNMVAYVKQTGVAGAAGDGMVFLLQGATPELKWYT YSGASMGALGENKYKGTLGIPNSIGIEFDLYGNRSSQDGFFDNGISGVYKNSHIAVIYPG MEAGYQDNYVLLGTSTRYVKHDNLITDVDLANGNWNRLDLHWQTNEPDFTKGVLAYQING GTPIIINSEILNAQVFLNGSVSTAYWGFTGSTGPTYKAVQNVVFQRVPGLVDAKVKMNVV NKDGQELPNGAVLEGNTTYTVNVTADWLDGKQNWQNILLETTLPEGIEVVPDTTTIDGNN ISDTLIWSANTLKTSDNQIPPLGNKQENTQTSSTISFKVKTKNDNFTNQNITNRFSGRNA IYNLEPYTFTIKPVTLSATITSPKDQAVIVDNNLTELSIETSWIAKGTASITQAIGYAQG GELQLVTLNQETITNEEGNFSYDMIEAFKKLSYGEFSVEYLLKNENNLSTSSKITLFKQN APSVSLKETEQSNTFYKGSPIKIPVLVEDKDSSYLDIIMEVEGQSEPYRQTIEHIPGETQ EVELNYDTSLLTPGIYTLKIYCMDSEKNKSEILSLDDIYLEGFLAFEKVPQAFSSDALKI GGNPEKVTNIGEIAITDSRVKRDNWLLEAHLVDSNFVNTASGTSKALTASNNFFYYQLDG QITSISTEPVTILRSNPTDTATRITVNQKQANGFYFNPNNSMGIGTYRGKIQWNLISAPT >gi|237663594|gb|GG668924.1| GENE 347 329448 - 329648 379 66 aa, chain + ## HITS:1 COG:L117090 KEGG:ns NR:ns ## COG: L117090 COG1278 # Protein_GI_number: 15672511 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Lactococcus lactis # 1 66 1 66 66 97 81.0 4e-21 MNNGTVKWFNADKGFGFITGEDGNDVFAHFSAIQSDGFKTLDEGQAVTFDTEEGPRGLQA TNIVKA >gi|237663594|gb|GG668924.1| GENE 348 330434 - 331765 1426 443 aa, chain + ## HITS:1 COG:lin2555 KEGG:ns NR:ns ## COG: lin2555 COG1508 # Protein_GI_number: 16801617 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Listeria innocua # 16 442 18 447 447 330 42.0 3e-90 MKFEQRMSQQQKQVQKLAMTQQLQQSIQILQFNTEELAAFVEAKALENPLIDLQVDTQYT TDFPITSRSYTNQDEENNYMNQIPDYHLSLFESLIDQIHLNYRDTYLRTLVLFLVEYIDV NGYLTISLEEAAEKTEASAIQMLDALTLLQQLDPAGVGARNLQECLMLQTERDDTAPNLA YILLEEEFDALVSRKWGPLAKKFGIELAEIQLIFDYIQTLSPTPGNIFDATEELYIRPDL TVRIKEDRIVVISNKAGRPTLNFQENYFKRMQETDDKEVQEYIKDKKNEFEWLERAVNQR GDTILRVGQEIVRRQEAFFLEADRPLKPMTLKEIADALSIHESTVSRAVNGKYLETTFGV FELRSFFSTSILSSEEDGEDVSTTMVKKQLQKLIDEEVKSKPLSDQKLVERLKDSGMEIS RRTVAKYREALGIPSSSKRKRYE >gi|237663594|gb|GG668924.1| GENE 349 331966 - 333843 1724 625 aa, chain + ## HITS:1 COG:L158566 KEGG:ns NR:ns ## COG: L158566 COG1835 # Protein_GI_number: 15674089 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Lactococcus lactis # 10 623 2 600 605 460 41.0 1e-129 MNQTANSKKKRYITGFDGIRTIAVIGVILYHLFPQVMRGGYLGVPIFFVVSGYLINDLLR QEWAENQTIDLKGFYVRRMKRLYPALIVMLLSAVSYITLFQQDLLNNIRSVVASSVFYYN NWWQIFKGFSYFDGFATQSPFVHIWSLAVEAQNYLIWPLLFILLERFVRKRGRIFSLVLI GALISVTLMAVLYVPGADPTRVYYGTDTRVFSILLGSALAYVWPSTRLKEEIPEASKKIL NGAGLSALVLLVLAFLTLSDHTNFVYYGGMFLISLAATVLVAVTAHPGADMNRWLTNPVF TWIGKRSYGIYLYQFPIMIFYEAKIKTLSDHVFLHSLVEIALILVVSELSYRFIEHPLTR LSYKDVWTQFTEFLRKPWDLREKGTMAFMTVISVIAVFGLIVAPANAKSAQQEQLEKNIA KNQQKIEERKKEVQESGTKNSSTSTESSTKPSESQDVLPTQLTPEQVKKAQNLEITTIGD SVILDGASGLQDIFPKMIIDGEVGRQLYSSISLIGELDKKKMLKDTVLVSLGTNGPFTEA QFDEFMKALGNRKVYWINVRVPTRRWQNQVNSLLSQMDKKYDNLTVIDWFNYSNAHDDWF YDDRVHPNVAGGEQYTHFIAEKILQ >gi|237663594|gb|GG668924.1| GENE 350 334058 - 335242 1757 394 aa, chain + ## HITS:1 COG:BS_metK KEGG:ns NR:ns ## COG: BS_metK COG0192 # Protein_GI_number: 16080107 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Bacillus subtilis # 4 389 5 394 400 595 77.0 1e-170 MTERHLFTSESVSEGHPDKVADQVSDAILDAILEKDPMARVACETSVTTGLVLVFGEIST TAYVDIQKIVRQTVKDIGYTRAKYGFDGETVAVLVAIDEQSPDIAQGVDAALEVRDQDEK DDIGAGDQGLMFGFAVDETPELMPLPIALSHRLVRRLAELRKEKVLPYLRPDAKSQVTVE YDDQGQPQRVDTIVISTQHDDETTLEQIEKDIKEQVINEVIPHELLDDETKYFINPTGRF VIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGL AKKVEVQLAYAIGVAQPVSISINTFGTSELPESKLIEAVRKNFDLRPAGIIEMLDLRRPI YKQTAAYGHFGRTDIDLPWEQTDKVEALKASLAE >gi|237663594|gb|GG668924.1| GENE 351 335226 - 335534 96 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315170884|gb|EFU14901.1| ## NR: gi|315170884|gb|EFU14901.1| hypothetical protein HMPREF9518_01349 [Enterococcus faecalis TX1342] # 56 102 1 47 47 79 97.0 8e-14 MPCNEPTIVGIAVDTMVPSMAVINVATKTLTVTNLTFVSFAICSHPFLFNCQFSKLLHSY SIQKRTKCLKKMLFHKKIIVKKQEVSQVLADFLFFYLIIQLN >gi|237663594|gb|GG668924.1| GENE 352 335410 - 336876 1771 488 aa, chain + ## HITS:1 COG:lin0980 KEGG:ns NR:ns ## COG: lin0980 COG0477 # Protein_GI_number: 16800049 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 3 478 2 479 491 389 50.0 1e-108 MAKETNVKLVTVSVFVATFMTAIEGTIVSTAMPTIVGSLHGMEIMNWVFSIYLLTNAMLT PIYGKLADKIGRKPVFMIGIIIFILGSSLCGFAQDMLTLIIARAIQGVGAGAILPVALTI IADMYSLDKRAKILGLNSAAWGIASIFGPLAGGFIVDTVGWHWIFFINVPIGLVLLGLIS IFLVEPKRERTKMPMDILGSVTLMAVLLTLLLGFQMISDNGFTLVTFGCLSLSVLFFVAF VMIEKRAQDPVIDLHLFNQPTFVLVNLIAALISGFLMGIDVYIPMWMQGVLGKSAGIGGL VLAPMSLLWMAGSFIASSFMEKYAMKKVLTIGLSILLVGAIFLVVMPMAVPFWLFFVVSS VLGVGFGITITTTTVTAQSTVEPEKMGVATSFNTLVRTIGQTVMVSIFGVILNAGMFAKL EASALNVDADVMNQLVNPHTANLIPAALLKPLRGILYAGLHNVYLVGAGLVVVALLLNIF AKAQRAKV >gi|237663594|gb|GG668924.1| GENE 353 336915 - 337706 907 263 aa, chain + ## HITS:1 COG:L12887 KEGG:ns NR:ns ## COG: L12887 COG0627 # Protein_GI_number: 15673753 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Lactococcus lactis # 1 261 1 249 258 206 43.0 4e-53 MAFLQANIYSNVLEMEVNVNVILPQETVKKVGTSTQAALTDVPVLYLLHGMGGNHSVWAR RTSIERYVADLGIAVIMPSTDLAWYTDTQYDMNYWTFISEELPKICHQLFPQLSTKREKT FAAGLSMGGYGALKLGLAKPESFAAVASLSGAVSLSSTSFGELLKVRKRSYWEGIFGPLD QIEGSIHDPLYLLQQLVESQTEMPQFYLCCGEQDMLLSANQQMAQALEQAQASYTFETGP GEHDWVFWDEWIQKALAWLPIPK >gi|237663594|gb|GG668924.1| GENE 354 337787 - 338449 726 220 aa, chain - ## HITS:1 COG:no KEGG:EF0787 NR:ns ## KEGG: EF0787 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 220 1 220 220 401 98.0 1e-111 MEPKLSKDTIIAAAFSLLEKSPTLEQLSMRKVAKQLGVQAPAIYWYFKNKQALLQSMAEA IEEHFQEPVLCGEWYSDLLAFMENYYDLYQQFPCAVAIEIQTVPAYPQRLRHLNQMMGIL REAGFSPEMTHLAVTSLQHLLFGMIMDATEEKQLVSQVLNGDDYLKEQVLHMKQYVSDNG LTYMEESIQFRRSIHQKSAFIQAVKTYLDGLQADNTSSSK >gi|237663594|gb|GG668924.1| GENE 355 338703 - 340418 197 571 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 346 551 21 223 305 80 28 8e-14 MDLIIQHAKKYKGSVVIALLAVIVMVVSALWQPKLLQQVLEAIMNDDSDKMKNLGIQLIA IAGLGLVAGVINTIFSAKVAQGVSADIREATFRKIQTFSFGNIEKFSAGNLVVRLTNDVT QIQNVIMIALQTLFRIPFLFIGSFILAMLTLPQLWWVIVALVIAVILISMLSFSQMGKHF MIIQNLIDKINGIAKENLLGIRVVKSFVQEKNQLSRFTKVSEELTTHNLIVGSLFAVMIP AFMLVANLAVVGSIFFVSNLVKDDPTLIGGVASFMNYLMQIMMAIIIGGMMMMMTSRAAV SIKRIKEVMETEPDVTYKKVPEQELIGSVEFDHVSFRYPGDEEDTLKDISFSIQPGEMIG IVGATGAGKSTLAQLIPRLFDPTEGKIEVGGVDLREVNEHSLRKTVSFVLQKAILFSGTI AQNLRHGKRDASEADMERASGIAQAKEFIEKLAEGYDAPVEERSNNFSGGQKQRLSITRG VIGEPKILILDDSTSALDARSERLVREALDKELKETTTIVIAQKISSVVHADRILVLDNG RLVGEGTHEELAATNPVYQEIYETQKGKEEA >gi|237663594|gb|GG668924.1| GENE 356 340418 - 342187 261 589 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 335 571 115 351 398 105 31 3e-21 MTDLIKASKFFYHYLKRYKVSFLFIFLAIFAATYLQVKAPQFVGEAIQELAKYAVNVMQG KDDKSAFVSVIWKLLIFYVLTSAASFIYSILFTQVVGKSTNRMRIGLFNKLEKLTIRFFD SHQDGEILSRFTSDLDNIQNSLNQALLQVLTNIALLVGVLIMMFRQNVELAWATIASTPI AILIAVFVISKARKYVDLQQDEVGKLNGYMDEKISGQRVIITNGLQEETIDGFLEQNEKV RAATYKGQVYSGLLFPMMQGMSLVNTAIVIFFGGWLAINGSVDRAAALGLVVMFVQYSQQ YYQPLMQISSGYSMIQLAVTGARRLNEMFDEPDEIRPENGEKLEEINKAVALNHVVFGYN PETPVLKDVSIHVDKGEMVALVGPTGSGKTTIMNLMNRFYDVNEGAVTFDGVDIREMDLD SLRSHVGIVLQESVLFSGTIRENIAFGKPEATDEEIVQAAKQANIHEFIVNLEQGYDTEI TEENNLFSTGQKQLVSIARTIITNPELLILDEATSNVDTVTEAKIQKAMDEAIKGRTSFV IAHRLKTILNADRIIVLRDGEVIEEGNHHELVEQDGFYAELYKNQFVFE >gi|237663594|gb|GG668924.1| GENE 357 342385 - 342654 103 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293385215|ref|ZP_06631032.1| ## NR: gi|293385215|ref|ZP_06631032.1| ABC transporter, permease protein [Enterococcus faecalis R712] ABC transporter, permease protein [Enterococcus faecalis S613] hypothetical protein HMPREF9492_01455 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_02871 [Enterococcus faecalis DAPTO 516] ABC transporter, permease protein [Enterococcus faecalis R712] ABC transporter, permease protein [Enterococcus faecalis S613] hypothetical protein HMPREF9492_01455 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_02871 [Enterococcus faecalis DAPTO 516] # 2 89 40 127 127 135 93.0 8e-31 MGKMRNVRQLRRTFLVLNTLFVLSVFRENQWTKSALLFWFLANSFLYGLQWLIYLGGEKG WLTHLQRWYYCAVLLQIAGTLIVYFSFFV >gi|237663594|gb|GG668924.1| GENE 358 342717 - 343322 619 201 aa, chain + ## HITS:1 COG:lin2558 KEGG:ns NR:ns ## COG: lin2558 COG1309 # Protein_GI_number: 16801620 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 198 1 199 202 147 39.0 2e-35 MEKPNKRKADLERTRQIILSVASELFMTKGFKNTSTREIALKANITQPNLYHHFKNKKEL YLAVIEELTSRVQEELVPIVSGNASVEEKLYQLIKVLLDEHPTNLFLMLNDMFQEMGPDY NRTLYQIFKKTYINNIAAIFESEPETNCLQEGISVDDATRFILYNVSALLSIEKTYQRKT VDDDVKKFIQFMLHGVLKSHK >gi|237663594|gb|GG668924.1| GENE 359 343461 - 344540 1167 359 aa, chain + ## HITS:1 COG:L130944 KEGG:ns NR:ns ## COG: L130944 COG0577 # Protein_GI_number: 15674237 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Lactococcus lactis # 1 358 2 357 357 285 47.0 8e-77 MFLGFNEMKYSKGRYVLVVLVMVLIAWLIFILSGLANGLAQGNRLAVDQWQANQVVLSKE ANSNLNVSVLDENVKETISGGKIAPIGQQSLAIRPADDKKAELTNVSLFGIEKESFLMPK VIEGNAFTDKNQVIASETLKNQGFKIGDKLTAGKYDEQLEIVGFISKSSYNIVPVIYTSL DTWRSIKYGDNPAMAKMVNGFIVRSKDNAEVKTTNKDSQVLSISDFIEKLPGYSAQNLTL DGMIYFLIVIAAFIIGIFIFVMTLQKTAMFGVLKVQGVPTSFLAKAVMLQTALLAVLGVA IGLALTGITVLFLPEAMPYATNGPRMILFSVLLILSALIGGAFSIRTIAKIDPLIAIGG >gi|237663594|gb|GG668924.1| GENE 360 344545 - 345213 261 222 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 201 1 199 223 105 34 3e-21 MANVLEMKNIYKKYGEKHTEVIALKELSFAVQPGEFVAVIGPSGSGKSTFLTIAAGLQAP TSGEVIVGGQSLNKLTKKQRLAQRFQKIGFILQNSNLVPFLTVEDQFHLIEKVDKSRKNS ELKEQLLETLGLKELRNSYPRDLSGGERQRVAIACALYHEPDVILADEPTASLDTEKAFD VVQLLAKEAKEKDKGIIMVTHDERLLKYCDRVVRIRDGELTE >gi|237663594|gb|GG668924.1| GENE 361 345270 - 345833 630 187 aa, chain - ## HITS:1 COG:BH3285 KEGG:ns NR:ns ## COG: BH3285 COG0500 # Protein_GI_number: 15615847 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Bacillus halodurans # 6 187 7 190 190 158 45.0 6e-39 MLQTALHFSHQLLKEVVEPGDFVIDATMGNGHDTAFLAELVGPSGEVFAFDIQKEALINT EQKLTELNLLPQTTLFPLGHEHLHAVLDEETEITAAIFNLGYLPKSNKEIITKPTTTKQA LDGLLPHLVKGSRIILVVYYGHEGGSEELDLVTNYTQALPQDVYSVLRYEFINQKNQPPV LFCIEKK >gi|237663594|gb|GG668924.1| GENE 362 345833 - 346801 861 322 aa, chain - ## HITS:1 COG:L142355 KEGG:ns NR:ns ## COG: L142355 COG1242 # Protein_GI_number: 15674248 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Lactococcus lactis # 12 310 3 301 313 488 74.0 1e-138 MQIFPYSDDPNKRYHTWNYALRQQFGEKIFKVPIDGGFDCPNRDGTVAKGGCTFCSVSGS GDMIVAPSDPLPLQFQKEIQLMHQKWPTVDQYIVYFQNFTNTHAPVDVIRHRFEQVVNEK GVVGLSIGTRPDCLPDEVVNYLAELNERFYLWVELGLQTTFEETSAAINRAHDYQTYLDG VAKLRKHGIRVCTHLINGLPGETPAMMRENVRRTIQDSDIQGIKLHLLHLMTNTKMMRDY NEGRLQLMSKEAYVSVICDQLEMIPPEIVIHRLTGDAPFETIIGPMWSLKKWEVLNAIDA EMKRRNSYQGKYTVISGKEVFN >gi|237663594|gb|GG668924.1| GENE 363 346817 - 347467 578 216 aa, chain - ## HITS:1 COG:SP0489 KEGG:ns NR:ns ## COG: SP0489 COG0671 # Protein_GI_number: 15900403 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Streptococcus pneumoniae TIGR4 # 1 216 1 216 216 133 37.0 3e-31 MKNKLYYQFAGSCFLLVFMFLGYVVRFYPTWLKGFDQTITSFVRRPFPQLNNFFIWYTKF ANSLTIIILAIVVIALFIFWKYYAEALWLFINTALIAGVGNSLLKLFFMRQRPTLEHLVT EHTYSFPSGHAVGSTLFYGTILLILPIFIKNKTVRLCVQILLGIGIFMIGVSRIYLGVHF PSDILGGFCLGLAWLLLSYPIYLEKRFVWRFQSKQR >gi|237663594|gb|GG668924.1| GENE 364 347635 - 348660 978 341 aa, chain - ## HITS:1 COG:no KEGG:EF0797 NR:ns ## KEGG: EF0797 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 341 1 341 341 576 97.0 1e-163 MKKTTGILLSIAVLAMLIGGSGAVYFYKQAEKSVTPLKESYTLKNKQAGEELHLSLKGKG PYTIYKTDSNNMGLRSPNNAFYSKAEGTLDVKEEKNKITATINTTRTQNQPELSFFNIGI FNDLTPNVSVQIPNNVKKLVIDGSTHSQVSLNAFNVDELTTNLPNSYVSLSGVKAKKMTL DSSDGIYLSADTSAKTATVETTDGDITLDSAYFDEIKNTTTSGDIRVQNARGNIQATTTD GDISVYDFKGEANFSSENGDFSLDMPAVPKKLTVALVHGDIYVNSGEILRNISIKGESKL GDVQLLNKERTSYKNGRSDTEFNLSSEFGDITVDTPDDDNQ >gi|237663594|gb|GG668924.1| GENE 365 348660 - 349319 633 219 aa, chain - ## HITS:1 COG:no KEGG:EF0798 NR:ns ## KEGG: EF0798 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 219 1 219 219 433 100.0 1e-120 MNKEHFIIELKIYLKALNPKDQAIILAKYKALFDARVAEGETEEQVAKSLGKPRVIAEEI LKEQGIELTERKIENNGWQEIPAATPAYDHPYEEESEFYYDNDSPYYQRPQHRPLTRFFQ VLGIFCLNFFFMFWVILGIALMYVGCGIAGAATLFSPIYGIYSVITQANAASFFQLSMSL FLFGASIIGWLLFLPILKFSAHVFKRYFQWNIAVLRGDI >gi|237663594|gb|GG668924.1| GENE 366 349635 - 350741 1186 368 aa, chain + ## HITS:1 COG:L68758_1 KEGG:ns NR:ns ## COG: L68758_1 COG1705 # Protein_GI_number: 15672254 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Lactococcus lactis # 175 344 57 225 242 166 57.0 9e-41 MKKESMSRIERRKAQQRKKTPVQWKKSTTLFSSALIVSSVGTPVALLPVTAEATEEQPTN AEVAQAPTTETGLVETPTTETTPGTTEQPTTDSATTTESTTESSKETPTTPSTEQPTVDS TTPVESGTTDSSVAEITPVAPSTTESEAAPAVTPDDEVKVPEARVASAQTFSALSPTQSP SEFIAELARCAQPIAQANDLYASVMMAQAIVESGWGASTLSKAPNYNLFGIKGSYNGQSV YMDTWEYLNGKWLVKKEPFRKYPSYMESFQDNAHVLKTTSFQAGVYYYAGAWKSNTSSYR DATAWLTGRYATDPSYNAKLNNVITAYNLTQYDTPSSGGNTGGGTVNPGTGGSNNQSGTN TYYTVKSG >gi|237663594|gb|GG668924.1| GENE 367 351072 - 351872 808 266 aa, chain + ## HITS:1 COG:lin2838_2 KEGG:ns NR:ns ## COG: lin2838_2 COG1388 # Protein_GI_number: 16801898 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: FOG: LysM repeat # Organism: Listeria innocua # 33 265 3 253 254 126 37.0 5e-29 MKKGASGNTGGSGSGGSNNNQSGTNTYYTIKSGDTLNKIAAQYGVSVANLRSWNGISGDL IFAGQKIIVKKGTSGNTGGSSNGGSNNNQSGTNTYYTIKSGDTLNKISAQFGVSVANLQA WNNISGSLIFAGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVS VANLRSWNGIKGDLIFAGQTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYG ISIQKIKQLNGLSGDTIYIGQTLKVG >gi|237663594|gb|GG668924.1| GENE 368 352277 - 354385 2659 702 aa, chain + ## HITS:1 COG:lin1769 KEGG:ns NR:ns ## COG: lin1769 COG0495 # Protein_GI_number: 16800837 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Listeria innocua # 1 699 1 698 803 1130 76.0 0 MSYNHKEIEKKWQKYWAKNNCFNTLDDPNKEKFYALDMFPYPSGQGLHVGHPEGYTATDI LSRMKRAQGYNVLHPMGWDAFGLPAEQYALDTGNDPAEFTKKNIETFRRQINSLGFSYDW NREINTTDPEYYKWTQWIFTKLYEKGLAYEAEVAVNWVPELGTVISNEEVIDGKSERGGY DVVRRPMRQWMLKITAYADRLLEDLELVDWPESIKDMQRNWIGRSEGANVTFKVAGTEES FTVFTTRPDTLFGATYTVLAPELELVKKITTPEQTAAVEAYIEETSKKSDLNRTDLAKEK TGVFTGAYAINPVNGQEIPIWIGDYVLASYGTGAIMAVPAHDERDYEFAKTFGIDILPVI AGGDITTEAYTGDGPHINSDFLNGLNKAEAIAKMNEWLEENHVGKKEVSYRLRDWLFSRQ RYWGEPIPVIHWEDGTTTTVPESELPLRLPVTSDIRPSGTGESPLANIDEWVNVVDPETG MKGKRETNTMPQWAGSSWYYLRFIDPHNKNEIADFEKLKRWLPVDIYIGGAEHAVLHLLY ARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRGNVVNPDDVVAKYGADTLR LYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIVDEEGKMRDRITTINDGRLTKIYHQT VKKVTEDMANLHFNTAISQLMVFVNEANKVDALPYEYVELAS >gi|237663594|gb|GG668924.1| GENE 369 354528 - 354902 585 124 aa, chain + ## HITS:1 COG:lin1769 KEGG:ns NR:ns ## COG: lin1769 COG0495 # Protein_GI_number: 16800837 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Listeria innocua # 1 124 680 803 803 169 65.0 8e-43 MVFVNEANKVDALPYEYVEGFVQLLAPIAPHIGEELWQILGNEESLTYVPWPTYDEAALV EDEVEVVFQVNGKLRGKQNVARGLSKEELEQIAMNHEAVKEFIEGKTVRKVIAVPDKLVN IVAN >gi|237663594|gb|GG668924.1| GENE 370 354958 - 355182 243 74 aa, chain - ## HITS:1 COG:no KEGG:EF0802 NR:ns ## KEGG: EF0802 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 74 23 96 96 105 98.0 4e-22 MKKYRISLFLGLISLLLFMISILVGSTLSSDGLLKEPAFFCTPLGYFFLFIALLSVITIT CKEHMNQKGKTKQP >gi|237663594|gb|GG668924.1| GENE 371 355279 - 355722 373 147 aa, chain - ## HITS:1 COG:no KEGG:EF0803 NR:ns ## KEGG: EF0803 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 147 1 147 147 222 99.0 5e-57 MPTNKKEGMLFTTLMCFLMVFGMSTYNLLLHGEFSLYALSKGLLPGFIVAFILDVFIVGV LAKKIAFSLPFNKEKRLLLILTISSLMIIGMVTCMSLFGLLMEGQTLSLSAYFQAWGLNF IVALPYQLLIVGPFSRMILTNYQQRQT >gi|237663594|gb|GG668924.1| GENE 372 355899 - 356729 806 276 aa, chain - ## HITS:1 COG:lin1849 KEGG:ns NR:ns ## COG: lin1849 COG0834 # Protein_GI_number: 16800916 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Listeria innocua # 4 268 2 266 271 290 55.0 2e-78 MKKKYSLALLVICCSLLLFAGCGKRKSNEDQWTRINEEKRIIIGLDDSFVPMGFQDKSGN IVGFDVDLAKAVFKLYGISVDFQPIDWSMKETELQNQTIDLIWNGYTKTSERAEKVQFTQ PYMTNDQVLVSLKEKNIATASDMQGKILGVQNGSSGYDGFESQPDVLKKFVKDQTPILYD GFNEAFLDLKSGRIDGLLIDRVYANYYLSHEDNLKNYTISHVGYDNEDFAVGVRKSDNQL VKKINTAFETLRKDGTLSKISQKWFGEDVTNNTKIN >gi|237663594|gb|GG668924.1| GENE 373 356743 - 357378 390 211 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 208 1 213 245 154 38 3e-36 MLTIKNLTKHFDNRTIIDHLNLEIPEGKILTIVGPSGGGKTTLLRCLAGLETIDSGELLL DGVPFNPAEMDNADQVVGVVFQDFQLFPHLSVLENITLAPTLVLKEEKAKSQQEALELLE KLGLAGKEKLYPYQLSGGQKQRVALARALAMKPKVLGYDEPTSALDPALRQQVEEVILDL RKQGMTQIVVTHDMAFAEKIADNLLTVAPVQ >gi|237663594|gb|GG668924.1| GENE 374 357391 - 358032 678 213 aa, chain - ## HITS:1 COG:lin1851 KEGG:ns NR:ns ## COG: lin1851 COG0765 # Protein_GI_number: 16800918 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Listeria innocua # 1 213 1 213 213 237 67.0 1e-62 MDYILEILPALVSGAGMTLKVFFFTLLGSIPLGIIIAFILQSSFKPLRYLINLYIWLMRG TPLLLQLIFVFYGLPLIGIVFERYDAALFAFILNYAAYFAEIFRGGIQAIPQGQYEAAKV LRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKDTSLIYVLGLGDLLRAGKIAMSRDVT LVPLALVGVIYLLFTAILTVASKKIEKFYQYYK >gi|237663594|gb|GG668924.1| GENE 375 358866 - 360497 1933 543 aa, chain + ## HITS:1 COG:lin0200 KEGG:ns NR:ns ## COG: lin0200 COG4166 # Protein_GI_number: 16799277 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Listeria innocua # 1 542 1 549 549 392 39.0 1e-108 MKQKKWLIGLVALGLVLAACGSGGSKTTSNEPATQKINVASGGELSTLDSAHYTDVYSSD MIGQVVEGLYRQDKNGDPELAMAKAEPQVSEDGLVYTFKLREAKWTNGDPVKAGDFVVAF RNVVDPAYGSSSSNQMDIFKNGRAVREGQATMEEFGVKAIDDQTLELTLENPIPYLAQVL VGTPFMPKNEAFAKEKGTAYGTSADNFVGNGPFVISGWDGNSETWKLKKNDHYWDKEHVK LNEIDVQVVKEIGTGANLFDNGDLDYTVLADTYALQYKESKQAHFVPKAMVGYLSPNHRR EITGNEHVRKAFLQAIDKETFAKEILGDGSTALNGFVPANFAKNPDTGEDFRKENGDLLP YNIKEAQANWTKAKEELGKDKIELELISADSAIAKKTIEFVQGQLQQNLPGLTIKLKSLP LQNRLDLQTAGNYDLAFGTWTPDYADPINFLEFYDSKSGLNTSGYNDSAYDAGLQKVRKD YANEPEKRWNELLSLEKTLIEKDAGVLPLFQGAIGYLKSDRLQGLQVFSFGRTVSYRLAY VEE >gi|237663594|gb|GG668924.1| GENE 376 360604 - 360852 326 82 aa, chain + ## HITS:1 COG:SA0360 KEGG:ns NR:ns ## COG: SA0360 COG2261 # Protein_GI_number: 15926075 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 1 78 1 78 83 57 56.0 7e-09 MFSFLWALIVGGIIGAIAGAILGKDVPGGIIGNIIVGFLGSWVASLLLPSLGPVIGGFPI ISALLGAIICIAIYSFIVNRKA >gi|237663594|gb|GG668924.1| GENE 377 361244 - 362968 1360 574 aa, chain + ## HITS:1 COG:SMb20536 KEGG:ns NR:ns ## COG: SMb20536 COG4289 # Protein_GI_number: 16264263 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 54 567 60 572 617 372 37.0 1e-102 MESLKSNLFLTREAYLEAFETIMTPLKTAILTSEKPGVNFGSSGAVYDQQHAEMEALIRP LWGIGPYWVACKDDVLRDAYVEKLIAGTDPSSPDYWGDIVDYDQYIVEAAALSLTLLLHK TYFWSCFSEKQQENIMVWLNKALGCKIPKNNWTFFKVLIRLALEGCGQVINQAELEEELA LIERMYLGDGWYMDGKTTQRDYYISFAFHYYSLIYVKFMRERDPIRAKRFTERAVMFAQD YLYYFDEEGEALPYGRSQTYRFAQGAFFAALIFAEVEALPWGQIKTLLAKHLHCWMQQAI FTYDGRLSIGYHYENLVMAEGYNAPGSPYWAFKTFLLLAVDQDHPFWRAEPLAIKREEKR LIEKGNMLLIHPKMKTHVLGYPAGLWLENQAHAAAKYSKFVYSSRFGFSVPKAGARYEEG AFDNVLAVSRDGEYFRVKGKVHDFYLTEEQVYYKWLPFQEVEIETTIYPFGEWHVRVHEI VTSVPLKVREGGFSLPLLGKFSEKELGKEWARVDSGELCSQIVAIEGYDHAGILQPEPNT SLFFPRTSLPYLQKELPIGTHRLICLVGGVTREK >gi|237663594|gb|GG668924.1| GENE 378 362972 - 363799 652 275 aa, chain + ## HITS:1 COG:no KEGG:EF0811 NR:ns ## KEGG: EF0811 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 275 1 275 275 546 97.0 1e-154 MIKIELKNKDNQIITGRIDHEKPEAPFMAEGDTLAVLAIKQYLYQVGDKIVVTYTGATPY LMVQLDETLAPSLIYLKEKVWEYQIPLEESARKAFVDTAFHSARHQIMVRQAHTFEKDNY QNLSMNTHDQKEYSGAYPHAYANVETRNDAVFFAKNAIDSKFGNLSHGSYPFASWGINQQ KEAQITIDFGRPVETDWIRLLFRADYPHDSYWEEVTLAFSDGEERVVDTTNTACFQEIKF PMKTTQTLTLKCLRKALDSSPFPALTQIEVFGRNK >gi|237663594|gb|GG668924.1| GENE 379 364073 - 365236 864 387 aa, chain + ## HITS:1 COG:no KEGG:EF0812 NR:ns ## KEGG: EF0812 # Name: not_defined # Def: glucuronyl hydrolase, putative # Organism: E.faecalis # Pathway: not_defined # 1 387 1 387 387 796 99.0 0 MCSQENKQRLISLGENVTDEWIQTQLNECVSKIAKNMQRFGTQFPSACATNGRYRLKAND DWTNGFWTGMLWLAYEWSHQEKFRLLAMENIDSFQQRLEEHFVLDHHDIGFLYSLSAGAG YKITGDERCKQEVLAAAEVLSARFQENGSFIQAWGHYGDPKEYRLIIDSLMNLPLLFEAT KLSGNRIYEEIASRHYHTLMKTVIKSDATTYHTYYFDPETGRPKHGATHQGHSDTSIWAR GQSWAILGIPLNETFLHSQPFPEIYPQIVEVFLAHLPADLIPYWDFDFNDQMPSDKDSSA LAIAACGLLEADKLQAFPQAKELAKGMIYQLGEYYRTQNDSENEGLLLHGVYAHAEGKGI DEPNLWGDYFYMEALMRLAKPSWQRYW >gi|237663594|gb|GG668924.1| GENE 380 365249 - 367027 1640 592 aa, chain + ## HITS:1 COG:SP0060 KEGG:ns NR:ns ## COG: SP0060 COG1874 # Protein_GI_number: 15900005 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 1 588 1 584 595 636 53.0 0 MQTFEIKEDFLLNGQPIKIISGAIHYFRMTPRQWEDSLYNLKALGANTVETYIPWNIHEP EEGVYDFEGMKNIEAFVRLAEKLNLLVILRPSAYICAEWEFGGLPAWLLKEKGVRLRSTD PIFMTKVRNYFQVLLPKLAPLQITQGGPVIMMQVENEYGSYGMEKAYLRQTKQIMEELGI EVPLFTSDGAWEEVLDAGTLIEEDVFVTGNFGSHSKENAAVLKKFMTRHGKKWPLMCMEY WDGWFNRWGEPVIQREGTDLAKEVKDMLTVGSLNLYMFHGGTNFGFYNGCSARGAKDLPQ VTSYDYDALLTEAGEPTEKYYAVQKAIKEVCPEVWQAQPRTKKLGNLGSFPVTASVSLFA VKDQMMTPKTTAYPLSMEEAGSGYGYLLYSFDLKNYHHENKLKVVEASDRLHIYVDGDLA ATQYQETVGEELLISGQTEKDTLALDILVENLGRVNYGFKLNNPTQSKGIRGGVMQDIHF HQGYQHYPLTFSQEQLAKIDYTAGKNPLQPSFYQVTFELEQLADTYIDCRGYGKGFVVVN GHHLGRYWEIGPIHSLYCPKEFLQQGQNEVVIFETEGIEIEYLKFTNQVIID >gi|237663594|gb|GG668924.1| GENE 381 367052 - 367759 785 235 aa, chain - ## HITS:1 COG:SP0058 KEGG:ns NR:ns ## COG: SP0058 COG2188 # Protein_GI_number: 15900003 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 2 229 3 230 238 148 40.0 1e-35 MLPKYEQIKQDLLREIKNHTFIPGDKFYSEADIKRKYAVSSITAVKALNELTSAGYLYRI QGKGTFVSKSKVSQNVKFSDIELHSLDSEKVKVLSIEEENQAEILKELGLPANASYYRIK RVRYSEDTPFLVHITHLPKKLVKEPLSKDLTAYASVYERVRKDFSVDLFSLASVETNEIV FPEDAELLNLLQLSFREPAVKQVKHSYLADGSVAEYIISYKHWKYFKTKIEVEAE >gi|237663594|gb|GG668924.1| GENE 382 367987 - 368913 999 308 aa, chain + ## HITS:1 COG:SP0061 KEGG:ns NR:ns ## COG: SP0061 COG3444 # Protein_GI_number: 15900006 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 152 307 3 158 158 150 47.0 3e-36 MENIVLISHGSMAEGVKVSLEMIVGRQEHVHTVSLRPDSDNLQFEKELNEKMKALNGTTL IIADLLGGTPCNVATKNYLNVDGVEIIAGMTLSVVIEAVVNQQASIKELVCLAQENIVDV KAGMNQAEQEISEASKEKELSNYSQYAGKENIVNTRIDERLIHGQVAGIWSTSLSTQRII VANDEAATDPLQKSSLRMAAPSSMRLSVLGVEAAAKNIQSGKYGKQRLFLLFKNPKDVLR FIEAQGPIKTVNVGNMSYKEGAREVTKSIQVLPEEEQIFETIASKGVTVTAQLVPNDPVV DFMKKLRG >gi|237663594|gb|GG668924.1| GENE 383 368962 - 369753 1195 263 aa, chain + ## HITS:1 COG:lin0022 KEGG:ns NR:ns ## COG: lin0022 COG3715 # Protein_GI_number: 16799101 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Listeria innocua # 1 260 1 266 267 229 49.0 5e-60 MHLAAYQIILITIYAFIAINDSLISNTLTQPAIAGMISGMIMGDLKTGLMVGGTLQLMRL GIAAFGGASVPDYFTGAVLGTAFAVISGKGAEYGIGLAVPVSLLMLQLDVVARFCNVFLL HSVDKAIDKMQVKRIPRLVLSGSVLWGLSRAIPILLMLLAGDAVVTTITDNMPEWLMTGL KTAGGVLPVVGVGILLRYLPTKQYIPYLLLGFFLAAYLKVPMLGVSIVGMVAAMLVFKRD GAKSTTQATTGNGDFEGGYDGDE >gi|237663594|gb|GG668924.1| GENE 384 369746 - 370546 979 266 aa, chain + ## HITS:1 COG:lin0023 KEGG:ns NR:ns ## COG: lin0023 COG3716 # Protein_GI_number: 16799102 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Listeria innocua # 6 266 16 275 275 280 55.0 3e-75 MSKHKLTKKELNAISWRYILGSQLNWNYERMMSSGYLYGILPVLKKFYGHDEAQFQDMMR THNQFFNTNAIFGNLIMGIDVAIEEQDGYKAKETIIALKTALMGSLAGVGDSLFHVIWGT IFGSVAGTLAQNGSVVGCVIWIIANIALLFGRAALLPLGYKQGVKLVTTLKDKLSAFTNA ATVLGVTVIGALIPSVIKATVPFVYKKNGVELVIQDTLDAILPSLVPILLVLLTYWMLGQ KKLNSTRVIWIILILSIVLSAFGILA >gi|237663594|gb|GG668924.1| GENE 385 370661 - 373675 2813 1004 aa, chain + ## HITS:1 COG:no KEGG:EF0818 NR:ns ## KEGG: EF0818 # Name: not_defined # Def: polysaccharide lyase family protein 8 # Organism: E.faecalis # Pathway: not_defined # 1 1004 1 1004 1004 1929 99.0 0 MKNRKIWVMLVGLFTALTSGFMGTTLTFAEENEASQTIEQPSYISDFPNQVGHWQDLVGT AEKKNDSTGLWIANTKQGTNLESVSINLDAREQSSGDLELTFLYEGQSNFGLVFRGDKQK TSQWQSFAYNRDGRWQLGQPGGKWLTNIPGPTLLSGQQYKLLVRYDGKKIQTFLNDQLFY ENEEVHYPDGTSINDDWTGAVGIRLFGNLSKLNIISMKSGSVGSIPVIDSSAEYRGLKEK WRNQLVSKEYDSTNQALVDYVQKISNEATELDQTMNKEPNRSYLWPLEPGNTPSADLTTQ FTKLQKLALAYGTKGSTLYQDDKLAATIIDGLDFMVTQKGYDGKKYHGNWWDWQIGVPQK FLNILMILEDKVSPEKQQIYTNALSSYVPDPFKQLYTKPQGTFVDLAFIPNFVTSGANRT DLALTVLGLGILQKDSGKINQASSSIVDVFKLVTKGDGFYQDGSFIQHNNIPYTGSYGNV LVKGVGQILAITADSSFQMDATLVTEFVENVDRAFLPLIYKGEMLPTVNGRSISRAPAVG KTGYGSTTMYNLLIVAKFAPNNYQKKFQEAVKYWMKENPDYYLTNARDFNDLQMTMQLLT NPEITGGQLPFTGTKLYASMDRFVQRTPSYMFGLGLYSKRTASFEAGNKENKRGWHTGDG MMYVYNDDEVQFNSSYWPTVDPYRLPGTTVDTISLADEVSAFTTITSKEQWVGGVTSDNQ AVVGMALNKDGTKNNGKLLPMNLQAKKSWFVLNGQIIALGAGIKGDTEASIETVVDNRLL NDVYQYQVLSNIGEIHEKNETSKKQWLLLKSDHSNANMGYYFPEETTVNVKSETRKGTYK AINEAFPSDKEYVGDYRTFTIQHGQHPTNEHYAYVVLPGIDETDLKTYAAKKTVEVLSNT EEIQAVKQEEEGYLGVNIWSETGGTIAGITSNKAISLMRKTQQHQKTYTFSDPTQTTKTL TLKIPKDYSTVISQSDGITYDDATETFTINFENAAGSSKQIIVE >gi|237663594|gb|GG668924.1| GENE 386 373744 - 374067 470 107 aa, chain - ## HITS:1 COG:no KEGG:EF0819 NR:ns ## KEGG: EF0819 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 107 1 107 107 201 100.0 7e-51 MFERFDSDRSRYASLGVVSSLPSGLIDSIWLIIDLNLKGVIPLNDLLHFDLLNNNGKVTV HFSQENSSVEMAIDLPFSYSTAYPSRIFAFDDGHRETILLPAEMLES >gi|237663594|gb|GG668924.1| GENE 387 374319 - 374927 1004 202 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|29375409|ref|NP_814563.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus faecalis V583] # 1 202 1 202 202 391 100 1e-107 MSVQLEVKERAIRPRSLRNQLRHEGKVPAIVYGYQIESTPIYFEEKDLSKILREHGANTV IKMTVDGKNINTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGESAGVKAGGT LAQNLYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTDPEEQLVAIVE AQTAPEEEEGTAAETTEPELAE >gi|237663594|gb|GG668924.1| GENE 388 375258 - 376040 660 260 aa, chain + ## HITS:1 COG:SPy1398 KEGG:ns NR:ns ## COG: SPy1398 COG1187 # Protein_GI_number: 15675319 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Streptococcus pyogenes M1 GAS # 1 194 1 194 194 198 53.0 8e-51 MRLDKLLEELQFGSRKTVKRIIRGKQVTVDGIVTLNESQNVDAQLQMIKVKGQLISHKTH VYYMLNKPKGVVSAVSDASKKTVIDLIAPQDRRPGLYPVGRLDGDTEGLLLLTDNGQLGY QLIRPNKEVAKCYEVKVNGLVSAEDCAKFKDGIVLQGGIQCKPAKITVLAATETESHVFL TIQEGKFHQVKKMFLSVGKKVTALKRQTMGPVRLDPQLPLGAYRSLTREELQLLLPYFFI EKQQTSKALPSNLKREEERK >gi|237663594|gb|GG668924.1| GENE 389 376037 - 376717 683 226 aa, chain + ## HITS:1 COG:BS_yfnB KEGG:ns NR:ns ## COG: BS_yfnB COG1011 # Protein_GI_number: 16077800 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Bacillus subtilis # 2 224 5 227 235 247 54.0 1e-65 MKTLLFDVDDTLLDFKLAEKKALHALFEEENVPFTSEVESTYHRINQGLWRSFEEGKITK DVLLDTRFGLLFDAFNREVDSVKMGENYREYLSQGHDLLGNSQRILEKLAPHYDLYIVTN GVAKTQYRRLEDSKLMPYFKDIFVSEEVGYQKPMKEYFDFVFERIPNFSREKTMIIGDSL HSDIQGGQQAKIQTVWLNPTSAPATPTIQPNYTIQQLDELLPILGH >gi|237663594|gb|GG668924.1| GENE 390 376752 - 377207 437 151 aa, chain - ## HITS:1 COG:BS_yvbK KEGG:ns NR:ns ## COG: BS_yvbK COG0454 # Protein_GI_number: 16080442 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Bacillus subtilis # 15 150 19 155 155 135 51.0 2e-32 MIKKVKKETLTTAHYALLYEADPAKKMVADYITRGICFDYQTEELQGILVLLPTHPRTLE IVNIAVSEESRGRGIGQELLHFAIDFAKKEKYDSLEIGTGSTGFQQLYLYQKVGFRMTHI EPDFFIHHYDEPIIENGLPLKDMVRLRLHLS >gi|237663594|gb|GG668924.1| GENE 391 377290 - 377385 67 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSLGKGLAFFRVFIIIVKDNEVFEKKEVYT >gi|237663594|gb|GG668924.1| GENE 392 377382 - 378011 796 209 aa, chain + ## HITS:1 COG:BH1275 KEGG:ns NR:ns ## COG: BH1275 COG0572 # Protein_GI_number: 15613838 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Bacillus halodurans # 5 206 4 205 211 278 70.0 6e-75 MKDSQPIIIGVTGGSGSGKTSVSRAIFNNFPDHSIMMLEQDSYYKDQSHLSFEERLNTNY DHPFAFDTDLLIQHVEQLLNYQAIEKPVYDYVAHTRSTETVIQEPKEVIILEGILILEDR RLRDLMDIKVYVDTDDDIRIIRRIKRDMEERGRTLDSVIEQYLTVVKPMYHQFIEPTKRY ADIIVPEGGENHVAIDLINTKVDSILTKM >gi|237663594|gb|GG668924.1| GENE 393 378180 - 378521 321 113 aa, chain + ## HITS:1 COG:lin0887 KEGG:ns NR:ns ## COG: lin0887 COG2337 # Protein_GI_number: 16799960 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Listeria innocua # 1 112 2 112 115 119 59.0 1e-27 MIKRGEVFYANLSPVVGSEQGGIRPVLIIQNNKGNLFSPTLIVAPITRNVSKRLQPTQVL IEIPHNECRTPSLILLEQIRTLDKERMLHKVCQLSREEMEQVNQALKVSVGIR >gi|237663594|gb|GG668924.1| GENE 394 378623 - 379588 1051 321 aa, chain + ## HITS:1 COG:L194226 KEGG:ns NR:ns ## COG: L194226 COG0673 # Protein_GI_number: 15673536 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Lactococcus lactis # 4 321 2 319 324 247 43.0 2e-65 MDKIRYGIMSTAQIVPRFVAGIRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEEL CKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLM EAQKSVFLPITQKVKATIQEGGLGEILWVQSVTAYPNVDHIPWFYSREAGGGALHGSGSY PLQYLQYVLGKEIQAVTGTATYQQGATDSQCNLALKFAEGTLGNIFINVGLKIPSEMTIC GTKGQIVIPNFWKTDCAYYTDAQGNTVKWSEQFTSEFTYEINHVNQCLQDKKLTSPVMTK ELTIATVKIVEGFYQEWFDSE >gi|237663594|gb|GG668924.1| GENE 395 379958 - 380257 393 99 aa, chain + ## HITS:1 COG:no KEGG:EF0828 NR:ns ## KEGG: EF0828 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 94 1 94 639 179 98.0 4e-44 MTVLLSKRAINILLMLLDLEGSITTQELAENFTVSVRTIKYDLEDIRAWFEQHDETLYSK RNKGIWLDLPDSKRLLLKNEIIDVDRFETYPDQKSESMY >gi|237663594|gb|GG668924.1| GENE 396 380254 - 381876 1190 540 aa, chain + ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 394 97 486 499 115 24.0 2e-25 MIFQLLSVKGYLTAQQLADELLVSRNTIVSDLEQVERLLQAYDLTLIRQARQGFTISGEE SNVRLLMEFITQKELTEYDIYQIMNYVTKTKGAEKIPKIKFGSGTLFQGCYRSALKKMRN LINPLDQNQFDYAEILSITLRVAIAAARMQMAHTIGTYRVLSQKTRFEQRNEVPLLLLQE VFERYDLPLLADEYFYIYSDLFGTHQRQDMVQLTKQVIESVSKELNYPFVNDRQLFTNLF AHLSLRFTKKHLFINEYNPFSEEIKGKHPALFLAIQSACKQLIQRSVLLVNDSFCAYIAL HFLAAQERQQQEAKVVRIVYVCSTGLGVTSLIEQKILEEVPNVELAGFASVLNATEVIQA EKPDLVLSIFPIEEMTYPFIKVSPLLTDTDLSLIREEVDKILLGKRQGKGTARSTKSDVI EKNERIQSQDLLVKAYIIYEELKRMFQTKLLSEYQEAFLLHVLLMTHRITFNKQYEEIPC NGEVSRERQEEIRQIECLFAKNELPVNHAEISALLNYLEQPKEEEDGTSNGSTGDHSTKC >gi|237663594|gb|GG668924.1| GENE 397 381842 - 382165 491 107 aa, chain + ## HITS:1 COG:no KEGG:EF0829 NR:ns ## KEGG: EF0829 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 107 5 111 111 157 97.0 2e-37 MEAQEIIRQSAEPEKLQSIIKQTSERLAEAQIEPTELQWTILINHLNEMLNRSREGTTLS GVDRTLFTELTPETLKIAQETTEAIGQLSEDEWYVLAVHFEVAKQNN >gi|237663594|gb|GG668924.1| GENE 398 382180 - 382536 564 118 aa, chain + ## HITS:1 COG:no KEGG:EF0830 NR:ns ## KEGG: EF0830 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 118 1 118 118 194 100.0 7e-49 MITVVIADRLGKGQNVAKGVEQAGGRAVVVPGMGADMRLGDVMQQEKADLGISFCGSGGA GALTAATKYGYPERHGMRSIEEGVTAINDGKTVLGFGFMDQEELGKRVTEAFIKKHGA >gi|237663594|gb|GG668924.1| GENE 399 382567 - 382923 387 118 aa, chain + ## HITS:1 COG:no KEGG:EF0831 NR:ns ## KEGG: EF0831 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 118 1 118 118 183 99.0 2e-45 MDATKRSTQTVIVSGKGNKKNEAFASALNDVSKKVLKETTEVLIRIEPKKVTIRQAKEQV YTEKFLFFFFPRKRVIYHVELAVEVEIQAIAVEEVDFLTETIKEPNAVVVPFLSKRGV >gi|237663594|gb|GG668924.1| GENE 400 382939 - 383718 1061 259 aa, chain + ## HITS:1 COG:no KEGG:EF0832 NR:ns ## KEGG: EF0832 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 259 1 259 259 436 99.0 1e-121 MEFVIILLKSLLIGGLLGFAAGAGAARMFHAPQTQGLGAFRTLGEMNAAQGDPASHFSFG LGFFFNAWASAVGAGAFTQDVTHRIVPNWAAAILLVKDKDVTKTMHNPKKMGIVGAFVGM ATVAFLNSTAAAIPESLQVTAVAVLVPAATILINTVMPVLFWLAALDAGKRTGFWGTLFG GLSQLVMGNAVPGVVLGILIGKGVDDLGWTRMTRGMLGAIILLFILSGFFRGFDLEMIES FRLSIPQWLNNLHNVFTVK >gi|237663594|gb|GG668924.1| GENE 401 383738 - 384433 1075 231 aa, chain + ## HITS:1 COG:no KEGG:EF0833 NR:ns ## KEGG: EF0833 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 231 1 231 231 317 100.0 3e-85 MEQQEKNEWAQQEQEIQEGLKGKSFWYADWGFPILVGIMSAAIFAGTHMYVVYGVGAFNE VSIVAMLKAGLDGGSYGAAAAFGASFLFARILEGSLVGILDLGGSILTGIGIGVPAIFLS MGIKAPVENFGLALLTGALLGLAVGGVIVLIRKFTINQGNSTFGADVMMGAGNASGRFLG PLIILSAAGASIPIGIGATLGALGFYIWKKPIAGGAILGAMIFGAIFPVSL >gi|237663594|gb|GG668924.1| GENE 402 384564 - 385877 1417 437 aa, chain + ## HITS:1 COG:BS_ywbA KEGG:ns NR:ns ## COG: BS_ywbA COG1455 # Protein_GI_number: 16080890 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Bacillus subtilis # 1 437 1 442 444 295 42.0 2e-79 MNGFVQWMEVKLMPIANKFGSQRHMTAIRKGLIATMPLTIVGSFFTIFQNIPIEAYTKLI EPYQAILDIPSRYTMGLLALYATFGIASSLAKSYKLDSLTCGILALMAFLVTAAPPTRVF EDVDNVITAGRYINLANLGSASLFGAIVTALLSVEIYRFFIEKDIMIKMPDGVPPEVSNS FIALIPGAVILLLFWVIRHVIGFDLNGFLSTLLMPLKGILAGNSLFGGLLTVFLICFFWV LGIHGPAIMGPVIRPFWDMSIAENLEAFTNGANVHQLPNIFTEQFLQWFIWIGGAGTTLS LVVLMMFSKSTYLKSLGRLSFLPGLFNINEPVIFGTPIVMNPILGIPFIVAPLITTTLSY FLTVANIIPMMAARLAFAIPAPIAAWMSTNWSFSAAVLVIVNFLITIAIYYPFFKVYEKQ QLDKEAEELAAEQAAKN >gi|237663594|gb|GG668924.1| GENE 403 385954 - 386202 128 82 aa, chain + ## HITS:1 COG:no KEGG:EF0835 NR:ns ## KEGG: EF0835 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 11 82 11 82 82 114 98.0 2e-24 MIIWFIFFFIVSQIIIEKGQLPTVVYQLGLVKTLVFTAVCITLSMIIGGFLNQPVLLVGS TTILCSSVIAWKFRNKFENSGV >gi|237663594|gb|GG668924.1| GENE 404 386211 - 387299 1301 362 aa, chain + ## HITS:1 COG:L176316 KEGG:ns NR:ns ## COG: L176316 COG3589 # Protein_GI_number: 15672155 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 5 361 4 361 364 328 46.0 8e-90 MKRALGVSVYPDHSDINQDKAYLKKASECGFTRIFMSMLEVTDGKEAVQKKFKELISYAK NLGFETILDVVPSIFDELEISYDDLTFFSELGADGIRLDTGFDGNKEAMLTFNPFGVAIE LNMSNDVAYLDNILTYEANRPFLYGCHNFYPQAGTALPYDFFEKCSIRFKKEGIRTAAFI SSQVGEIGPWDVNDGLPTLEMHRQLPVTVQAKHLFATNLIDDVVIGNAYASNEELEALGQ LNRYQTELTIVFEEATSEIEKEIVTKNQHFRRGDITQQMIRSTEVRKKYKNEANPPHDNQ AMLQPGDVVVGNDAFGKYKNELQVVLEPHQDSRKNRVGRIIEEELVLLEFINPWTKFRFI EK >gi|237663594|gb|GG668924.1| GENE 405 387308 - 388412 1131 368 aa, chain + ## HITS:1 COG:STM4445 KEGG:ns NR:ns ## COG: STM4445 COG3964 # Protein_GI_number: 16767691 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Salmonella typhimurium LT2 # 3 367 2 364 377 340 45.0 3e-93 MDYDLLIKNGQTVDGMPVEIAIKEKKIAAVAATISGSAKETIHLEPGTYVSAGWIDDHVH CFEKMALYYDYPDEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGI VAQDELADLSKVQASLVKKAIQELPDFVVGIKARMSRTVIGDNGITPLELAKQIQQENQE IPLMVHIGSAPPHLDEILALMEKGDVLTHCFNGKENGILDQATDKIKDFAWQAYNKGVVF DIGHGTDSFNFHVAETALREGMKAASISTDIYIRNRENGPVYDLATTMEKLRVVGYDWPE IIEKVTKAPAENFHLAQKGTLEIGKDADLTIFTIQAEEKTLTDSNGLTRVAKEQIRPIKT IIGGQIYD Prediction of potential genes in microbial genomes Time: Tue Jul 5 12:51:02 2011 Seq name: gi|237663593|gb|GG668925.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD4, whole genome shotgun sequence Length of sequence - 128375 bp Number of predicted genes - 143, with homology - 134 Number of transcription units - 67, operones - 42 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 603 - 662 8.3 1 1 Op 1 . + CDS 775 - 1185 276 ## EF1872 hypothetical protein + Prom 1221 - 1280 2.3 2 1 Op 2 . + CDS 1341 - 1826 95 ## EF1871 thioredoxin family protein + Prom 2737 - 2796 4.1 3 2 Op 1 36/0.000 + CDS 2842 - 4011 588 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 4 2 Op 2 36/0.000 + CDS 4018 - 4677 250 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 5 2 Op 3 . + CDS 4677 - 6053 915 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 6147 - 6196 6.1 - Term 6142 - 6177 3.5 6 3 Tu 1 2/0.091 - CDS 6184 - 6630 298 ## COG3464 Transposase and inactivated derivatives - Prom 6779 - 6838 2.6 7 4 Tu 1 . - CDS 6840 - 7094 175 ## COG3464 Transposase and inactivated derivatives 8 5 Tu 1 . - CDS 7226 - 7336 191 ## gi|69243909|ref|ZP_00602487.1| Transposase, IS204/IS1001/IS1096/IS1165 - Prom 7581 - 7640 7.8 + Prom 7540 - 7599 4.3 9 6 Op 1 40/0.000 + CDS 7624 - 8277 515 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 8293 - 8352 11.1 10 6 Op 2 . + CDS 8415 - 9593 619 ## COG0642 Signal transduction histidine kinase 11 7 Op 1 . - CDS 9918 - 10871 557 ## COG3328 Transposase and inactivated derivatives - Term 10895 - 10919 -1.0 12 7 Op 2 . - CDS 10941 - 11087 276 ## EF1874 IS256 family transposase - Prom 11189 - 11248 9.5 + Prom 11220 - 11279 8.5 13 8 Op 1 1/0.273 + CDS 11340 - 12185 533 ## COG5495 Uncharacterized conserved protein 14 8 Op 2 19/0.000 + CDS 12197 - 13024 631 ## COG0413 Ketopantoate hydroxymethyltransferase 15 8 Op 3 . + CDS 13039 - 13695 442 ## COG0414 Panthothenate synthetase 16 8 Op 4 12/0.000 + CDS 13682 - 13885 141 ## COG0414 Panthothenate synthetase 17 8 Op 5 . + CDS 13898 - 14293 219 ## COG0853 Aspartate 1-decarboxylase + Term 14444 - 14473 0.2 + Prom 16214 - 16273 80.3 18 9 Tu 1 . + CDS 16386 - 17501 334 ## COG3328 Transposase and inactivated derivatives 19 10 Op 1 . - CDS 17606 - 18517 651 ## EF1875 hypothetical protein 20 10 Op 2 . - CDS 18536 - 19540 700 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 21 10 Op 3 . - CDS 19537 - 21660 959 ## EF1877 hypothetical protein - Prom 21730 - 21789 38.8 22 11 Tu 1 . - CDS 22691 - 23671 641 ## EF1878 ATP/GTP-binding protein, putative - Term 23760 - 23826 30.0 23 12 Op 1 . - CDS 23992 - 24234 308 ## EF1878 ATP/GTP-binding protein, putative 24 12 Op 2 . - CDS 24221 - 24610 143 ## EF1879 hypothetical protein - Prom 24832 - 24891 8.6 + Prom 24586 - 24645 11.8 25 13 Tu 1 . + CDS 24674 - 25402 410 ## EF1880 hypothetical protein 26 14 Op 1 . - CDS 25409 - 26236 414 ## EF1881 hypothetical protein 27 14 Op 2 . - CDS 26310 - 26813 737 ## EF1882 hypothetical protein 28 14 Op 3 . - CDS 26826 - 27047 291 ## EF1883 hypothetical protein - Prom 27126 - 27185 4.5 29 15 Op 1 . + CDS 27341 - 27427 62 ## 30 15 Op 2 . + CDS 27444 - 28694 874 ## COG3547 Transposase and inactivated derivatives 31 16 Op 1 . - CDS 28826 - 28924 147 ## 32 16 Op 2 . - CDS 28957 - 30141 902 ## COG2946 Putative phage replication protein RstA - Prom 30287 - 30346 2.5 - Term 30426 - 30467 6.5 33 17 Op 1 . - CDS 30490 - 30657 266 ## 34 17 Op 2 . - CDS 30650 - 30727 69 ## - Prom 30778 - 30837 2.0 - Term 30828 - 30878 2.1 35 18 Op 1 . - CDS 30885 - 31325 492 ## EF1889 hypothetical protein - Prom 31351 - 31410 2.1 - Term 31343 - 31388 -0.6 36 18 Op 2 . - CDS 31412 - 31768 343 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 37 19 Tu 1 . - CDS 31870 - 32130 132 ## BpOF4_20219 putative COX1/OXI3 intron 2 protein - Prom 32161 - 32220 3.4 - Term 32313 - 32353 -0.2 38 20 Tu 1 . - CDS 32529 - 33743 73 ## COG3344 Retron-type reverse transcriptase - Prom 33918 - 33977 4.3 39 21 Op 1 . - CDS 34337 - 35353 663 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 40 21 Op 2 . - CDS 35423 - 35767 400 ## EF1893 hypothetical protein 41 21 Op 3 . - CDS 35777 - 36151 482 ## EF1894 hypothetical protein 42 21 Op 4 . - CDS 36164 - 36478 440 ## EF1895 hypothetical protein - Term 36508 - 36551 5.1 43 22 Op 1 . - CDS 36591 - 37379 655 ## EF1896 cell wall surface anchor family protein - Prom 37484 - 37543 80.3 44 22 Op 2 . - CDS 37545 - 39419 1668 ## COG4932 Predicted outer membrane protein - Prom 39482 - 39541 80.4 45 23 Op 1 . - CDS 39621 - 39935 371 ## EF1896 cell wall surface anchor family protein - Term 39961 - 39999 4.5 46 23 Op 2 . - CDS 40015 - 40677 295 ## EF1897 hypothetical protein - Term 40973 - 41013 6.1 47 24 Op 1 33/0.000 - CDS 41048 - 41443 654 ## PROTEIN SUPPORTED gi|227519245|ref|ZP_03949294.1| 50S ribosomal protein L19 - Prom 41477 - 41536 5.3 48 24 Op 2 30/0.000 - CDS 41539 - 42279 875 ## COG0336 tRNA-(guanine-N1)-methyltransferase 49 24 Op 3 . - CDS 42269 - 42793 641 ## COG0806 RimM protein, required for 16S rRNA processing - Prom 42822 - 42881 7.7 - Term 42854 - 42894 7.5 50 25 Tu 1 . - CDS 42901 - 44262 1521 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family - Prom 44323 - 44382 5.7 + Prom 44276 - 44335 8.2 51 26 Tu 1 . + CDS 44459 - 44833 392 ## EF1902 glyoxylase family protein + Term 44978 - 45028 2.3 + Prom 44974 - 45033 8.1 52 27 Op 1 . + CDS 45064 - 45663 745 ## COG0398 Uncharacterized conserved protein + Term 45683 - 45736 5.5 + Prom 45665 - 45724 4.2 53 27 Op 2 . + CDS 45764 - 47566 1284 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Term 47644 - 47714 31.6 - Term 47560 - 47626 30.0 54 28 Op 1 . - CDS 47709 - 48395 903 ## COG0670 Integral membrane protein, interacts with FtsH 55 28 Op 2 . - CDS 48388 - 48873 653 ## COG2030 Acyl dehydratase - Prom 48896 - 48955 6.6 - Term 48993 - 49053 5.0 56 29 Tu 1 . - CDS 49071 - 50408 1475 ## COG0773 UDP-N-acetylmuramate-alanine ligase - Prom 50501 - 50560 8.2 - Term 50511 - 50557 5.7 57 30 Op 1 . - CDS 50563 - 50961 557 ## EF1909 hypothetical protein - Prom 51033 - 51092 2.2 - Term 50980 - 51022 1.7 58 30 Op 2 . - CDS 51099 - 51506 471 ## EF1909 hypothetical protein - Prom 51532 - 51591 6.2 - Term 51582 - 51629 9.3 59 31 Tu 1 . - CDS 51633 - 52592 1134 ## COG4129 Predicted membrane protein - Prom 52631 - 52690 6.2 + Prom 52547 - 52606 4.8 60 32 Tu 1 . + CDS 52695 - 53306 648 ## COG4129 Predicted membrane protein + Term 53308 - 53357 11.4 - Term 53296 - 53345 11.4 61 33 Op 1 . - CDS 53347 - 54228 1091 ## COG1940 Transcriptional regulator/sugar kinase 62 33 Op 2 . - CDS 54231 - 54533 326 ## COG0759 Uncharacterized conserved protein - Prom 54674 - 54733 10.0 + Prom 54631 - 54690 5.0 63 34 Tu 1 . + CDS 54711 - 54863 228 ## 64 35 Op 1 4/0.000 - CDS 54880 - 55461 732 ## COG0218 Predicted GTPase - Prom 55493 - 55552 2.0 - Term 55489 - 55556 12.1 65 35 Op 2 . - CDS 55559 - 56812 267 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 - Prom 56851 - 56910 2.9 + Prom 56890 - 56949 7.0 66 36 Tu 1 . + CDS 56971 - 58032 1194 ## COG2706 3-carboxymuconate cyclase + Term 58061 - 58112 14.2 - Term 58049 - 58100 14.2 67 37 Op 1 . - CDS 58111 - 58599 314 ## EF1919 acetyltransferase 68 37 Op 2 . - CDS 58611 - 59984 1428 ## COG3069 C4-dicarboxylate transporter 69 37 Op 3 . - CDS 60001 - 60921 1057 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase - Prom 61062 - 61121 7.6 + Prom 61012 - 61071 9.6 70 38 Op 1 . + CDS 61104 - 63014 1669 ## COG0524 Sugar kinases, ribokinase family + Prom 63057 - 63116 10.8 71 38 Op 2 . + CDS 63198 - 64640 988 ## EF1923 hypothetical protein + Term 64845 - 64894 8.9 - Term 64775 - 64821 -1.0 72 39 Op 1 . - CDS 64943 - 65788 710 ## EF1925 hypothetical protein 73 39 Op 2 . - CDS 65781 - 66320 390 ## COG4915 5-bromo-4-chloroindolyl phosphate hydrolysis protein - Prom 66341 - 66400 9.0 - Term 66512 - 66555 4.4 74 40 Op 1 4/0.000 - CDS 66595 - 67314 1138 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 75 40 Op 2 5/0.000 - CDS 67322 - 69151 2164 ## COG0578 Glycerol-3-phosphate dehydrogenase 76 40 Op 3 . - CDS 69172 - 70677 1743 ## COG0554 Glycerol kinase - Prom 70762 - 70821 8.1 - Term 70897 - 70947 7.5 77 41 Op 1 . - CDS 70954 - 72420 1161 ## EF1931 hypothetical protein 78 41 Op 2 . - CDS 72410 - 73744 1179 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases - Prom 73952 - 74011 10.5 + Prom 73786 - 73845 7.6 79 42 Op 1 . + CDS 73924 - 74280 396 ## EF1933 hypothetical protein 80 42 Op 2 . + CDS 74314 - 74475 186 ## EF1934 hypothetical protein 81 42 Op 3 . + CDS 74447 - 74593 95 ## - Term 74538 - 74571 4.5 82 43 Op 1 . - CDS 74720 - 75157 628 ## EF1936 hypothetical protein 83 43 Op 2 . - CDS 75227 - 75763 402 ## PROTEIN SUPPORTED gi|227385040|ref|ZP_03868434.1| acetyltransferase, ribosomal protein N-acetylase - Term 75775 - 75820 8.3 84 43 Op 3 . - CDS 75833 - 78538 3349 ## COG0474 Cation transport ATPase - Prom 78782 - 78841 9.3 - Term 78729 - 78778 4.3 85 44 Tu 1 . - CDS 78856 - 79506 559 ## EF1939 hypothetical protein + Prom 79439 - 79498 6.7 86 45 Op 1 . + CDS 79595 - 80260 521 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 87 45 Op 2 . + CDS 80332 - 80727 468 ## EF1941 hypothetical protein + Prom 80757 - 80816 5.0 88 46 Tu 1 . + CDS 80837 - 82018 1050 ## COG0477 Permeases of the major facilitator superfamily + Term 82076 - 82120 2.1 - Term 82011 - 82077 31.6 89 47 Tu 1 . - CDS 82115 - 83950 1588 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Prom 83978 - 84037 7.2 + Prom 83832 - 83891 7.0 90 48 Op 1 . + CDS 84055 - 84156 85 ## 91 48 Op 2 . + CDS 84159 - 84308 272 ## EF1947 hypothetical protein + Term 84363 - 84403 3.4 + Prom 84369 - 84428 5.4 92 49 Tu 1 . + CDS 84459 - 84809 380 ## COG5646 Uncharacterized conserved protein - Term 84782 - 84816 6.0 93 50 Op 1 . - CDS 84820 - 85170 401 ## COG4898 Uncharacterized protein conserved in bacteria 94 50 Op 2 3/0.000 - CDS 85244 - 86248 1190 ## COG2222 Predicted phosphosugar isomerases 95 50 Op 3 3/0.000 - CDS 86242 - 87318 826 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 96 50 Op 4 13/0.000 - CDS 87329 - 88159 998 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 97 50 Op 5 13/0.000 - CDS 88143 - 88934 905 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 98 50 Op 6 9/0.000 - CDS 88950 - 89420 591 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 99 50 Op 7 3/0.000 - CDS 89432 - 89851 526 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Term 89875 - 89909 3.2 100 50 Op 8 . - CDS 89923 - 92694 2194 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain - Term 93133 - 93178 4.3 101 51 Op 1 . - CDS 93366 - 94052 548 ## COG0232 dGTP triphosphohydrolase 102 51 Op 2 . - CDS 94045 - 94728 616 ## COG0232 dGTP triphosphohydrolase 103 51 Op 3 . - CDS 94745 - 95569 629 ## EF1959 hypothetical protein - Prom 95665 - 95724 11.7 - Term 95857 - 95896 3.2 104 52 Tu 1 . - CDS 95922 - 97220 1672 ## COG0148 Enolase - Prom 97268 - 97327 5.1 105 53 Op 1 13/0.000 - CDS 97352 - 98107 926 ## COG0149 Triosephosphate isomerase 106 53 Op 2 26/0.000 - CDS 98156 - 99349 1498 ## COG0126 3-phosphoglycerate kinase - Prom 99373 - 99432 3.1 - Term 99392 - 99428 6.3 107 53 Op 3 5/0.000 - CDS 99476 - 100477 1277 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 108 53 Op 4 . - CDS 100517 - 101554 1045 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain - Prom 101687 - 101746 7.8 - Term 101916 - 101961 9.0 109 54 Tu 1 . - CDS 101974 - 102852 889 ## COG1284 Uncharacterized conserved protein - Prom 102894 - 102953 6.2 110 55 Op 1 2/0.091 - CDS 102995 - 103564 788 ## COG4475 Uncharacterized protein conserved in bacteria 111 55 Op 2 3/0.000 - CDS 103561 - 104067 603 ## COG4720 Predicted membrane protein 112 55 Op 3 . - CDS 104051 - 104866 764 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase - Prom 104887 - 104946 5.1 - Term 104981 - 105022 8.1 113 56 Op 1 13/0.000 - CDS 105041 - 106810 2211 ## COG0173 Aspartyl-tRNA synthetase 114 56 Op 2 . - CDS 106828 - 108129 1587 ## COG0124 Histidyl-tRNA synthetase - Prom 108229 - 108288 4.4 115 57 Op 1 7/0.000 - CDS 108487 - 108933 566 ## COG1490 D-Tyr-tRNAtyr deacylase 116 57 Op 2 . - CDS 108957 - 111170 2542 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases - Prom 111225 - 111284 8.0 - Term 111342 - 111374 -0.0 117 58 Op 1 9/0.000 - CDS 111385 - 112137 737 ## COG1385 Uncharacterized protein conserved in bacteria 118 58 Op 2 . - CDS 112139 - 113086 1600 ## PROTEIN SUPPORTED gi|227519318|ref|ZP_03949367.1| ribosomal protein L11 methyltransferase 119 58 Op 3 . - CDS 113102 - 113587 706 ## EF1977 hypothetical protein 120 58 Op 4 . - CDS 113544 - 114221 809 ## COG2094 3-methyladenine DNA glycosylase - Prom 114320 - 114379 6.8 + Prom 114268 - 114327 4.2 121 59 Op 1 . + CDS 114350 - 115627 1466 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase + Prom 115632 - 115691 1.7 122 59 Op 2 . + CDS 115711 - 115914 75 ## + Term 115916 - 115947 1.1 123 59 Op 3 . + CDS 115955 - 116233 291 ## EF1980 hypothetical protein + Term 116406 - 116472 30.0 124 60 Tu 1 . + CDS 116595 - 117068 673 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 117079 - 117132 18.1 - Term 117127 - 117170 13.0 125 61 Op 1 7/0.000 - CDS 117180 - 118367 1489 ## COG0282 Acetate kinase 126 61 Op 2 . - CDS 118392 - 119363 1049 ## COG0827 Adenine-specific DNA methylase - Prom 119442 - 119501 8.2 - Term 119449 - 119497 0.3 127 62 Op 1 . - CDS 119528 - 119881 246 ## EF1985 hypothetical protein 128 62 Op 2 . - CDS 119881 - 120315 356 ## COG4940 Competence protein ComGF 129 62 Op 3 . - CDS 120305 - 120655 122 ## EF1987 hypothetical protein - Prom 120722 - 120781 5.1 + Prom 120924 - 120983 6.9 130 63 Tu 1 . + CDS 121010 - 121135 161 ## + Term 121282 - 121340 12.1 131 64 Tu 1 . - CDS 121432 - 122373 464 ## COG0276 Protoheme ferro-lyase (ferrochelatase) - TRNA 122403 - 122476 62.3 # Met CAT 0 0 - Term 123073 - 123106 3.1 132 65 Op 1 . - CDS 123113 - 123334 162 ## EF1990 hypothetical protein - Prom 123372 - 123431 9.0 - Term 123377 - 123422 8.7 133 65 Op 2 . - CDS 123433 - 123633 333 ## COG1278 Cold shock proteins - Prom 123750 - 123809 9.5 - Term 124327 - 124382 5.0 134 66 Tu 1 . - CDS 124470 - 124634 116 ## EF1992 endolysin - Prom 124723 - 124782 80.3 135 67 Op 1 . - CDS 124784 - 125710 1074 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 136 67 Op 2 . - CDS 125711 - 125944 331 ## COG5546 Small integral membrane protein 137 67 Op 3 . - CDS 125937 - 126158 251 ## gi|227555456|ref|ZP_03985503.1| hypothetical protein HMPREF0346_2619 138 67 Op 4 . - CDS 126193 - 126348 218 ## EF1994 hypothetical protein 139 67 Op 5 . - CDS 126350 - 126670 401 ## EF1995 hypothetical protein 140 67 Op 6 . - CDS 126684 - 127175 589 ## gi|227519338|ref|ZP_03949387.1| hypothetical protein HMPREF0348_2321 141 67 Op 7 . - CDS 127175 - 127462 449 ## MPTP_1473 hypothetical protein 142 67 Op 8 . - CDS 127459 - 128055 777 ## MPTP_1474 hypothetical protein 143 67 Op 9 . - CDS 128048 - 128374 423 ## EF2810 hypothetical protein Predicted protein(s) >gi|237663593|gb|GG668925.1| GENE 1 775 - 1185 276 136 aa, chain + ## HITS:1 COG:no KEGG:EF1872 NR:ns ## KEGG: EF1872 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 136 1 136 136 211 100.0 5e-54 MGVKKVKIKEGQSISSEEEGMSINANGKNETFKPSDYTLEAKKEYVYEYLGLKFKLSDKF RNYIADKKIAMLDDQSPIDKELKYAILTFEKMTEEQKNAVIEKMGDGYKNWQNELERIGT IGIFEKNTSEEKNLKL >gi|237663593|gb|GG668925.1| GENE 2 1341 - 1826 95 161 aa, chain + ## HITS:1 COG:no KEGG:EF1871 NR:ns ## KEGG: EF1871 # Name: not_defined # Def: thioredoxin family protein # Organism: E.faecalis # Pathway: not_defined # 1 161 1 161 161 297 100.0 8e-80 MLSEKTDLENTEAFNKESVKDLRKLSTKDINGKDFTSKDFEKYDLTMVNVFATWCTACVK EIPDLVEVQNEMKSKGVNIVGVVTDPVDDNGENKEAIEKSKLIHEKTKASYPFLMPDKTN FNGRLNGIQAMPETFFVDSNGETKVVLDKAIRICMECIGIG >gi|237663593|gb|GG668925.1| GENE 3 2842 - 4011 588 389 aa, chain + ## HITS:1 COG:SP0599 KEGG:ns NR:ns ## COG: SP0599 COG0577 # Protein_GI_number: 15900507 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 389 1 387 387 247 37.0 3e-65 MKSSNEIEKALYESSNSSISITKKDGKYFNVNQFKDIEKLKEIEEKIIQYDGLAKLKDAK VVSGEQRINREDLSDEFKNVVSLEATNNTKRNILFSSGVFTIKEGKNIEENDKNSIIVHE EFAKQNNLKLGDEVDLELLDIEKSGKIKSHKFKIIGIFSGKKQETYTGLSSDFSENMVFV DYSTSQEVLNNSENNEIANKILMYSGSAESTDLALNKLKELKIDESKYFVEKDSNAFEES LESVSGIKYIIKVMTYSIMLVGMVVLSLILILWLRERIYEIGIFLSIGTSKIQIIMQFIF ELIFISIPSIISSLFLGNVLLKVIVDGFINSEDSMISGGSLINSSSFMSNITTLGQSYLI LISIIVLSVVFASSLMLIKKPKEILSKIS >gi|237663593|gb|GG668925.1| GENE 4 4018 - 4677 250 219 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 189 1 199 223 100 33 3e-20 IMDILEIKNVAYSYANSKEKVLSGVNQKFELGKFYAIVGKSGTGKSTLLSLLAGLDKPQT GKILFKNEDIQNKGYSNHRKNNISLVFQNYNLIDYLSPIENIRLVNKSADESILFELGLD KKQIKRNVMKLSGGQQQRVAIARALVSDAPIILADEPTGNLDSVTAGEIINILKTLAKDR NKCVIVVTHSKEVADSADIILELSGKKLKKVNKMNLEVE >gi|237663593|gb|GG668925.1| GENE 5 4677 - 6053 915 458 aa, chain + ## HITS:1 COG:SP0601 KEGG:ns NR:ns ## COG: SP0601 COG0577 # Protein_GI_number: 15900509 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 456 1 457 459 506 60.0 1e-143 MIKNAFAYVTRKSLKSLIIILVILSMSTLSLISLSIKDATDRASKETFANITNSFSMEIN RQVNPGTPRGGGNVKGEDIKKISQTDSIDSYVKRINSVADLVDYDIIETQETLANQSPER AKNFKRTVMLTGVNDSTKETKFVSEAYKLVEGKHLENEDKNKILMHKDLAEKNNLKVGDK IKIKSNLFDADNEKGADETVEVEIKGLFDGHNSGGVSAAQELYENTLITDVHTAAKVYGN TEDTAVYQDATFFVKGDKNLDSVIKDLGKIDINWREYNLIKSSSNYPALQQSISGIYSIS NKLFFGSLIFAGVVVSLLLFLWMNARKKEIAVLLSLGISKLEIFGQFLIEMVFISIPAFV GSYFLAQYTADKLGNNILNKVTGDIAKQIAKQSASSQLGGGAEAEGFNKTLSSLDINVLP KFMIYVVIFMSLVLLVSLIISSFNILRRNPKELLIDNN >gi|237663593|gb|GG668925.1| GENE 6 6184 - 6630 298 148 aa, chain - ## HITS:1 COG:SP1582 KEGG:ns NR:ns ## COG: SP1582 COG3464 # Protein_GI_number: 15901424 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 139 265 402 418 108 42.0 3e-24 MKRYWKLLQKEEAKLNYEKRVWRASFKDYLTESEIVDRLLSACPNLRQGYQLYQDILYAV KKRDQSLFEDCLNREVSGLPETYTTTLRTFKKFLPQIQNALHYSYSNGPLECLNNHIKVL KRNAYGFRSFYNFKLRIMIRHGKTFLTK >gi|237663593|gb|GG668925.1| GENE 7 6840 - 7094 175 84 aa, chain - ## HITS:1 COG:FN0275 KEGG:ns NR:ns ## COG: FN0275 COG3464 # Protein_GI_number: 19703620 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 1 83 130 212 317 77 46.0 7e-15 MTEIARQKNISTSSVYRVMKRFYRPLNPFKQTLPKVLCFDEFKSVRHVTSAMSFIMMDGQ SHALLDIVENRRLPYLERYFLGFH >gi|237663593|gb|GG668925.1| GENE 8 7226 - 7336 191 36 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|69243909|ref|ZP_00602487.1| ## NR: gi|69243909|ref|ZP_00602487.1| Transposase, IS204/IS1001/IS1096/IS1165 [Enterococcus faecium DO] Transposase, IS204/IS1001/IS1096/IS1165 [Enterococcus faecium DO] # 1 31 1 31 424 62 87.0 8e-09 MDNHTRKLLGLTDKHLFFDEDWLIEKEYMSIALIWS >gi|237663593|gb|GG668925.1| GENE 9 7624 - 8277 515 217 aa, chain + ## HITS:1 COG:SP0603 KEGG:ns NR:ns ## COG: SP0603 COG0745 # Protein_GI_number: 15900511 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 217 1 218 218 263 62.0 3e-70 MKILTVEDDNMIREGISEYLSEFGYTVIQAKDGREALSKFNSDINLVILDIQIPFINGLE VLKEIRKKSNLPILILTAFSDEEYKIDAFTNLVDGYVEKPFSLPVLKARIDSLIKKNYGH LEKFEYKDLSVNFNSYTAKINGEEIDVNAKELEVLKCLLDNNGQVLTRMQIIDYVWKDSE ETPYDRVIDVYIKELRKKLQLDCITTIRNVGYKLERK >gi|237663593|gb|GG668925.1| GENE 10 8415 - 9593 619 392 aa, chain + ## HITS:1 COG:SP0604 KEGG:ns NR:ns ## COG: SP0604 COG0642 # Protein_GI_number: 15900512 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 2 388 49 434 442 286 40.0 5e-77 MANEISSNMNGKEIKYIEQTLEFYSKSSEIKVFIKEKNNKNEIQIKDNINVNLESDSNSL IIEEKEIKLNDGKKTNLQFVSTADMQKDAKDLSLKFLPYSLLISILFSAIISLIYAKSIK NNIQEIKIVTDKMMKLDKKMSLKVSSNDEVGELKQQINDLYSTLLRTIDDLEFKNKEILK LEKLKYDFFKGASHELKTPLASLKIILENMKYNIGKYKERDIYINECIEIVDSLTKNISQ ILSVHSIENLNNDEEYLKINDTLEDILKKYEILANQKKITVNNYILDENVYIGKTALKII LSNLISNAVKYTDVNGVINIGIVNDWLYIENSYGNNKISNMDKIFDVKFDLNKENSNGLG LYIVSNILNNYNIEYKVLQDEEFFIFKIKIFS >gi|237663593|gb|GG668925.1| GENE 11 9918 - 10871 557 317 aa, chain - ## HITS:1 COG:L24515 KEGG:ns NR:ns ## COG: L24515 COG3328 # Protein_GI_number: 15673186 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Lactococcus lactis # 1 316 73 389 391 322 51.0 5e-88 MNLTIPRDRNGELSQQTLPAYKRTNDSLETTIIQLFQKGITMAEISKLIEKMYGHHYTPQ TISNMSKLVAEDVLAFKERTLEANYSVIFMDATHIPVKRQTVSKEAVYITIGIRLDGTKE VLGFTIAPTESAYIWKEVLQDLRKRGLEEVLLVVTDGLSGIEESIHSVYPNAQFQQCCVH VSRNIAHKVRVRDRKEICEDFKLVYQANSKEEALDHIDFMIRKWKKQYPRVVNLLLNPAL LTFYNFPHAIRRTIYSTNLIEGFNKQLKRYTRRKEQFPNEESLERFFISQFNQYNQKFLG RIHKGFKEIQDTLESMI >gi|237663593|gb|GG668925.1| GENE 12 10941 - 11087 276 48 aa, chain - ## HITS:1 COG:no KEGG:EF1874 NR:ns ## KEGG: EF1874 # Name: not_defined # Def: IS256 family transposase # Organism: E.faecalis # Pathway: not_defined # 1 48 1 48 396 70 70.0 2e-11 MTKFTIEIMQTLLNKGDLDELFQDHLERAINSLLQAELTAFLDYEKYD >gi|237663593|gb|GG668925.1| GENE 13 11340 - 12185 533 281 aa, chain + ## HITS:1 COG:RSp0668 KEGG:ns NR:ns ## COG: RSp0668 COG5495 # Protein_GI_number: 17548889 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 1 262 11 272 294 105 25.0 9e-23 MNVGFIGAGKVGCSFGKYFQEHKIQVTGFYSKSEDSSLAASNFTSSKQYLNLRELVDEND TIFITTPDGQIQEVWQEIKNYQIKNKLICHCSGAISSDIFSNIQDYGAYGYSVHPMFSIS DKYNSYKKLKKSFITIEGDEKYAKFLCDFFKKLGNSTVIVSKENKSLYHAASVVSSNLVL GLINTSVTYLIQCGFTEKMAIEALYPLIEFNIRNIKEKGIIESLTGPVERCDISTIKGHC EVLSDEDRALYMLLSKNVLEIAMLKNINRDYSELEKYLGES >gi|237663593|gb|GG668925.1| GENE 14 12197 - 13024 631 275 aa, chain + ## HITS:1 COG:CAC2914 KEGG:ns NR:ns ## COG: CAC2914 COG0413 # Protein_GI_number: 15896167 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Clostridium acetobutylicum # 1 274 1 274 276 383 68.0 1e-106 MKNTAVTFKESKLRNEKLTMLTAYDYSTAKIIDEAGINGILVGDSLGMVCLGHEDTLSVT MEDMIHHTRAVTRGAKNTLVVADMPFMSYQTSVYDSVVNAGRLIKEGRAQVVKLEGGIEV CDKIEAIVKASIPVMAHIGLTPQSVNAFGGFKVQGKDKEAAKELIRAAKAVEKAGAFAVV LECVPTKLAELISKEISIPTIGIGAGAGCDGQILVYQDMLGMYSDFTPKFVKKYANLSEE MNKAFTKYIEEVKDGVFPGPEHGFKISDDVLEKLY >gi|237663593|gb|GG668925.1| GENE 15 13039 - 13695 442 218 aa, chain + ## HITS:1 COG:CAC2915 KEGG:ns NR:ns ## COG: CAC2915 COG0414 # Protein_GI_number: 15896168 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Clostridium acetobutylicum # 1 218 1 218 281 326 71.0 2e-89 MVIFKTVNDVRSQVKEWKKQGLKVGLVPTMGYLHEGHESLIRKASKENDKVVVSIFVNPT QFGKNEDLGSYPRDLERDIEVCTRGRATAIFNPEVEEMYCDNASTFVNITGLTEGLCGAS RPIHFRGVCTVVSKLFNIIPADRAYFGEKDAQQLAVIKRMVRDLNIDIDVVGCPIIREED GLAKSSRNTYLSLEERSSATILNKSLTLAKEALNNGER >gi|237663593|gb|GG668925.1| GENE 16 13682 - 13885 141 67 aa, chain + ## HITS:1 COG:CAC2915 KEGG:ns NR:ns ## COG: CAC2915 COG0414 # Protein_GI_number: 15896168 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Clostridium acetobutylicum # 2 66 217 281 281 65 56.0 2e-11 MERDSLKIIEIISKNINTCNLAKIDYVEVVDSLSLQRVNYIEKSVLVAIAVFIGKTRLID NFTFELQ >gi|237663593|gb|GG668925.1| GENE 17 13898 - 14293 219 131 aa, chain + ## HITS:1 COG:CAC2916 KEGG:ns NR:ns ## COG: CAC2916 COG0853 # Protein_GI_number: 15896169 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Clostridium acetobutylicum # 1 126 1 126 127 167 62.0 7e-42 MKVTMLKGKIHRAKVEQAELDYVGSITVDMDLLEAAGIYEYEKVQIVDVNNGNRFETYTI AGERGTGMICLNGAAARCVSTGDKIILMAYCELNENEVKDHRPKVVFVDDNNKVERVTSY EKHGRLSDIIL >gi|237663593|gb|GG668925.1| GENE 18 16386 - 17501 334 371 aa, chain + ## HITS:1 COG:L24515 KEGG:ns NR:ns ## COG: L24515 COG3328 # Protein_GI_number: 15673186 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Lactococcus lactis # 1 365 26 390 391 371 50.0 1e-102 MEKAVNTLLKTELTAFLDYEKYDRIGFNTGNSRNGSYDRTVKTEYGELHLQIPRDRNGEF KQQTVPAYRRTNDTLEETVIHLFRKGITMSEIADLIEKMYGHHYTPQTMSNITKSFTEEV TAFKGRELHDRYAAIYMDATYIPLKRKTVAKEAIHIAVGIRPDGSKEVLSYAIAPTESIT IWEEILLDLQERGLKNVLLFITDGLKGMVGAISRFYPKARFQHCCVHVSRNISHKVRVDD RKEVCDDFKMVYQTSSKKVALEARGAFAEKWKTSYPKVVESILSNDHLLTFYDFPLAIRK SIYSTNLIESFNKQIKKYSHRKEQFQNEESMERFLVSSFDTYNQKFLGRSHKGFQQAEGE LEQMLSQLIEN >gi|237663593|gb|GG668925.1| GENE 19 17606 - 18517 651 303 aa, chain - ## HITS:1 COG:no KEGG:EF1875 NR:ns ## KEGG: EF1875 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 303 1 303 303 485 99.0 1e-135 MKIKIERIQKEKMSKKKKERTISVGKHRKMVLALWLLLSCSLAFGIYKNFTAIDQHTTHV KMVVKEKVINTSGVESFTKNFVKEYFSWKNNKEVIEKRMSNLGQYLTEEGLALSQDMVRV DIPTSSEVNSVKILDVEKRSKDFVVSFLVDQKITEGKKSEQISSAYRVKIFEDEKENHIV TSLPTMISKPGKAKYEVKQVESDSDIDAKTTQEITEFLETFFKLYPTASEKELEYYSENE SMSQVSSDLRFVEITNPIYLEKDGSVQVKIVVKYLNEIEKVTNSFQYNLLLNKEENWKII NGE >gi|237663593|gb|GG668925.1| GENE 20 18536 - 19540 700 334 aa, chain - ## HITS:1 COG:BS_yddH_2 KEGG:ns NR:ns ## COG: BS_yddH_2 COG0791 # Protein_GI_number: 16077564 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Bacillus subtilis # 215 332 5 122 124 122 48.0 8e-28 MNLKELSVISLTMLMLSFMGILMCVSLLFGEDSEGSGTSGISPGGNSVSEEVLKHRSMVE KYAKESDILDYVPILLAIIQVESGGTMEDVMQSSESAGLPPNSLSTEASIKQGCIYFASL VKSSKELGCDQDSIIQAYNYGGGYLNYVAKNGKKHSFTLAESFSKEKSGGQKVDYPNPIA IKENGGWRYNYGNMFYCLLVKQYLTTTQFDDKTVQGIFDEAFKYEGTAYVFGGSSPATGF DCSGLTQWCYAKVGLKLPRVAQDQYDVMTHIDLKDAKPGDLIFFHSTYDAGTYVTHVGIY AGENRMFHAGNPVGWTNLTESYWQQHLIGAGRYN >gi|237663593|gb|GG668925.1| GENE 21 19537 - 21660 959 707 aa, chain - ## HITS:1 COG:no KEGG:EF1877 NR:ns ## KEGG: EF1877 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 707 1 707 707 1340 100.0 0 MKKKLFRIVGIVFISILTLIVLLSLVGTVAEATGLVDDTVESGNLYSKYSLNNYQLDFFV DSSWDWLPWNWGDGLGKSVMYGLYAITNFIWTVSLYLSNATGYVVQEAYKLDFISDTAES IGKNIQTLADITENGLQTSGFYFGFLLLMILALGVYVAYTGLLKRETTKAVRAVINFVMI FLLSGSFIAYAPTYITKINDFSSDVSEAALTLGTEIVVPNSESQGKDSVDLIRDSLFSIQ VQQPWLLLQFDDSNIEEIGEDRVNKILSVSPDENKGKDREEAVKAEIEDNDNANLSITKT MNRLGIVVFLVLFNIGISFFVFLLTGIMLFSQILFIIFAMFLPISFLLSMLPTYESLGKM AIIRLFNTIMMRAGVTLVITTAFSISTMFFNISATYPFFMVAFLQIVTFAGIYFKLGDIM SMFNLQSNDSQSMGRRVMRRPQMLMNRKLRQLNRNVGRTLAFGGAAAVGNKLAKEQSKPK FKPAGSSLRKNSRLPNDREVSSDSAKENPISNNKKQSRMNLTGRKIGKVLDTQALVKDKA KQVKDQVRNTPTNLKYILHKGLEKTKKAPKEFKRGLVQEKADREKLRDKQRQRRDEKMDE KRKNLGEVTDRHGKRRSNVSIKEDPKPQKDRILKNELPKRIVMVKPNSEVRRRLVKQNLV ARENNQLLSKKNSFQQVKQRSTLPKRANQKVQRIMKARPKPKSGDKK >gi|237663593|gb|GG668925.1| GENE 22 22691 - 23671 641 326 aa, chain - ## HITS:1 COG:no KEGG:EF1878 NR:ns ## KEGG: EF1878 # Name: not_defined # Def: ATP/GTP-binding protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 325 148 472 815 632 99.0 1e-180 MMGDFVSLSNEEIRRYTKLEKLMESKLARRFKVRRVTPSDLTYLIEHIYGEKGTPFEEYE FQLPKKKLKSETLVKRYDLLHPSRCLIEENPRYLRMEHENHESYVAYLTINTIVGEMEFP SSELFYYQQQQFTFPIDTSMNVEIVTNKKALATVRNKKKELKDLDNHAYQSDNETNSNVL DALDSVNELETTLDQSKESMYKLSYVVRVSAESVDELKRRCDEVFDFYDDTNVKLVRPFG DMMGLHEEFLPSSKRYMNDYIQYVTSDFLAGLGFGATQKLGELEGIYFGYNVDTGRNVYL KPALASQGVKGSVTNALAAAFLGSLS >gi|237663593|gb|GG668925.1| GENE 23 23992 - 24234 308 80 aa, chain - ## HITS:1 COG:no KEGG:EF1878 NR:ns ## KEGG: EF1878 # Name: not_defined # Def: ATP/GTP-binding protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 80 1 80 815 157 97.0 1e-37 MYPIKYVENNLVFNQEGECFAYYELVPYNYSFLSPEQKYQVHDNFRQLIAQNREGKIHAL QIATESSIRATQERSKKEAS >gi|237663593|gb|GG668925.1| GENE 24 24221 - 24610 143 129 aa, chain - ## HITS:1 COG:no KEGG:EF1879 NR:ns ## KEGG: EF1879 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 129 1 129 129 235 100.0 5e-61 MKKIKSYTSIWAVEKVIYAINDFQLPFPVTFNQMAWFVLSLLFVIVFAHVPPLSMIEGAF LKYLGIPVVVTWFMSQKTFDGKKPLGFLRSFLSYHLRFKVTFAGKKVKEQKKRWDEPITL VRSVNYVPD >gi|237663593|gb|GG668925.1| GENE 25 24674 - 25402 410 242 aa, chain + ## HITS:1 COG:no KEGG:EF1880 NR:ns ## KEGG: EF1880 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 242 1 242 242 419 100.0 1e-116 MQNLITMASGTLNEVYSGTEIATLFAEYGAEFNSSVPFISTPFPNFTSKATAIQNNLQSF TEEQQFKIIKELCESVLAQNPANKDVAKILKLLLKNYGSVYSNDKIDRNIINETNTWLTA SSRAKEEFEKAIQSYDNSIYNRYTLDSIRLAFEFFMQDILKNSKSLENQPIEGELLPLLR KKGIPKEIINLVRLIIKGLISYQNENVKHSQTFTDLEVEFVIEQTSILMKLFAKIEKIEN ES >gi|237663593|gb|GG668925.1| GENE 26 25409 - 26236 414 275 aa, chain - ## HITS:1 COG:no KEGG:EF1881 NR:ns ## KEGG: EF1881 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 275 1 275 275 493 100.0 1e-138 MNIDEAKQLANYFSDGSPGYILEFNNLEWDLYTKKIVGFGIQERFGGSKGNSFKEFLVSE DISDHLKFKLIYSLNETMKQIASIRQFENPSSYKSPKMNPLVTLLIEEAYHKKDSARLLN GTKFSKEVNLEYIQQLPTRISKDIQNKDFDSVLTKSNTMIDEVLKYIIENTKGKSIDNNT VRSKDLRNQAFERLNIKIDKDMDKRIKALVGALNTLSDKILEMRNSQGDAHAQGSRRIVI NEEEAILTANSAMILCEYLFRKYEKRKRFSDAKES >gi|237663593|gb|GG668925.1| GENE 27 26310 - 26813 737 167 aa, chain - ## HITS:1 COG:no KEGG:EF1882 NR:ns ## KEGG: EF1882 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 167 1 167 167 303 100.0 2e-81 MEQMRVYIANLGRYNEGELVGAWFTPPVDFDEIKERIGLNNEYEEYAIHDYELPFEIDEY TPIEEINRLCGLAEELEGTPIGEVASEIQHAFFNSFEEMVEHLDNIVYYPDCNDMSDLAY YLIEEAGALGEVPTHLQNYIDYEAYGRDLEIEGNYLVTSRGVFELCE >gi|237663593|gb|GG668925.1| GENE 28 26826 - 27047 291 73 aa, chain - ## HITS:1 COG:no KEGG:EF1883 NR:ns ## KEGG: EF1883 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 73 1 73 73 102 100.0 7e-21 MNFGQNLYQWFLTNAQSLVLLAIVVIGLFLGFKREFSKLIGFLVIALIAVGLVFNASGVK DVLLNLFNRIVGA >gi|237663593|gb|GG668925.1| GENE 29 27341 - 27427 62 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLYYARLSLDNVILGYPTVPKQFPNNQ >gi|237663593|gb|GG668925.1| GENE 30 27444 - 28694 874 416 aa, chain + ## HITS:1 COG:FN1357 KEGG:ns NR:ns ## COG: FN1357 COG3547 # Protein_GI_number: 19704692 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 3 407 2 385 391 103 26.0 6e-22 MKLFVGLDVSSEKLDACFMTDDSTCSVLKEASYGNSQLGASQIKEYILEFSQKFEIESLV IGMEATSLYSFHPAMFFKEDLELNQLNLMVSVEQPNKIKKYRDIFEENKNDQIDAFYIAD YFRIQRQVNSIIKEEEYLALQHLTRTRYQLIKQLVRTKQHFIENIYYKCNTLSKELKAEG GSVLSATLVTLMTEDYTMDQLAELSLEEFANLIQKLGKYRFKNPEGIAKAISKAIRSSYR LGKVHQDSVDIVLGVLAKEIRSLEKLIKDLDKAIDDLVVVLPEYQCLTSIPGIGPVYAAG ILAEIGPINRFSDESKLAKYAGLYWRQNQSGNSEYENTPMAKRGNRYLRYYLVEATNSVR RYEPEYHAYYKKKYAETPKHKHKRAIVLTARKFTRLVDTLLRNHQLYMPPRSVIDK >gi|237663593|gb|GG668925.1| GENE 31 28826 - 28924 147 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLAFGGSMLSVTVMCLMHASVAANQAMEKKV >gi|237663593|gb|GG668925.1| GENE 32 28957 - 30141 902 394 aa, chain - ## HITS:1 COG:BS_ydcR KEGG:ns NR:ns ## COG: BS_ydcR COG2946 # Protein_GI_number: 16077554 # Func_class: L Replication, recombination and repair # Function: Putative phage replication protein RstA # Organism: Bacillus subtilis # 66 394 27 352 352 255 42.0 9e-68 MVQRNLDYRLLKDRRNEYGISQNKLATACGLSRPYLNQIENGGVTASTKTMRKIFNQLES FNPDLPLSLLFDYVRIRFPTTDARKIIQEILHLKFDYMLHEDYAFYSYQEQYVMGDIVVM LSHEEDKGVLLELKGRGCRQFETFLLAQKRSWYDFFEDCLKAGGVMKRLDLAINDLVGLL DIPDLTKKCQKEECISLFRTFKSYRSGELLKADEKDGMGNTLYIGSLKSEVYFCLYEKDY EQYIKLGIPLDKTETKNRFEIRLKNDRAYHAIQDLLKGRSIESTTFSIINRYLRFADKVE GKRRTNWPLNEQWGRFIGRNRKEIQLTSEPKPYTIERTLNWLGRQVAPTWKMAKELDRLN QTTYIQDMVQNARLSDRHKKILEQQSMAIENLII >gi|237663593|gb|GG668925.1| GENE 33 30490 - 30657 266 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTEKEKVEEIMEKYNRNFSTLQKNASAKELKTVFKFVADESNRKQRELIGLDKEK >gi|237663593|gb|GG668925.1| GENE 34 30650 - 30727 69 25 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDIDNVELTLPISYTKEILEEELHD >gi|237663593|gb|GG668925.1| GENE 35 30885 - 31325 492 146 aa, chain - ## HITS:1 COG:no KEGG:EF1889 NR:ns ## KEGG: EF1889 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 146 1 146 146 273 100.0 2e-72 MTEDDSLQYAKENKKEIISSVIDGKEKEEEKTAIFMAGSPGAGKTEAAQTLTVLNSNLCV IDADKFRVLFPGYVGNNSDEFQRGSSLLVDAALDLVLKKGYSFILDATFATSKVKQNIER ALKKNYNVLVYYVYQDPFIAWDFTKK >gi|237663593|gb|GG668925.1| GENE 36 31412 - 31768 343 118 aa, chain - ## HITS:1 COG:BS_ydcQ KEGG:ns NR:ns ## COG: BS_ydcQ COG1674 # Protein_GI_number: 16077553 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Bacillus subtilis # 1 110 337 446 480 141 60.0 3e-34 MLTTKESAVILNKLKQIVMLGRQSGFFLILACQRPDAKYLGDGIRDQFNFRVALGRMSEL GYSMMFGEVDKNFFMKRIKGRGYVDTGGSVISEFYTPLVPKGYDFLESIKQVAQSKEK >gi|237663593|gb|GG668925.1| GENE 37 31870 - 32130 132 86 aa, chain - ## HITS:1 COG:no KEGG:BpOF4_20219 NR:ns ## KEGG: BpOF4_20219 # Name: not_defined # Def: putative COX1/OXI3 intron 2 protein # Organism: B.pseudofirmus # Pathway: not_defined # 1 86 213 298 304 87 52.0 2e-16 MKSGKCEITKQFLPAKAVHCHHYLPKSLGGDDKFDNLRIIHKDIHLLIHTTNKMIIDHYV NELKLLPEQIAKINLYRKMCNLQNIQ >gi|237663593|gb|GG668925.1| GENE 38 32529 - 33743 73 404 aa, chain - ## HITS:1 COG:SMb21167 KEGG:ns NR:ns ## COG: SMb21167 COG3344 # Protein_GI_number: 16264581 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Sinorhizobium meliloti # 57 396 45 341 453 161 33.0 2e-39 MNVETDEVQGSGKNVGKSVMEVPRLNTKIRYWEYYDLQETFDQLFTQSKNGKKFYQLYEL IISENNILLAYRTIKANKGSSTPGTDSFTIDNYKEMNQAEFIHLILSQLENYKPKSIKRV MIPKPNGEKRPLGIPCMIDRIIQQMFKQVLEPICEAKFYEHSYGFRPLRSAKHALGRIMY LINISKMHYAVDIDIKGFFDNVNHRLLIKQLWNIGICDKRVLAILSKSLKSPIQGEGISS KGTIQGGIISPLLSNVVLNDLDHWVSKQWHTFETKYPYTKGYNKFRALRDTNLKQGYIVR YADDFKIMTNDYPSALKWFHAVKLYLKDRLKLDISNEKSKIVNLRKRKSEFLGFTICVKQ KGKNGFVIRIFLTKRKIKLKKRLNKELKIFKRALQHKMLSYLML >gi|237663593|gb|GG668925.1| GENE 39 34337 - 35353 663 338 aa, chain - ## HITS:1 COG:BS_ydcQ KEGG:ns NR:ns ## COG: BS_ydcQ COG1674 # Protein_GI_number: 16077553 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Bacillus subtilis # 31 328 41 335 480 266 46.0 3e-71 MYKEHRIRARDQHLVYHFILGWLIALLISWMGVFYFQEFRQFDISRVSLSTIETVWSMKE LICLLGSLGFSGAMLLLYIHFFPDHWRSLWHRQKLARMILENHWYEVKQTQSEGFFKDLN SSRTRETISYFPKIYYRMKEGLLSIRVQISLGKYQEQLLKLEKKLESGLYCELVEKELKD SYVEYTLLYDMIANRIGIDEVVAENGTLRLMKNQVWAYDSLPHMLIAGGTGGGKTYFLLT IIEALLKSDAELFILDPKNADLADLGTVMPHVYSQKEEISACVEDFYERMIARSKAMKEM PNYKPGENYAYLGLPPNFLIFDEYVAYMGANRFPTSIE >gi|237663593|gb|GG668925.1| GENE 40 35423 - 35767 400 114 aa, chain - ## HITS:1 COG:no KEGG:EF1893 NR:ns ## KEGG: EF1893 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 114 4 117 117 185 100.0 5e-46 MEINVEHILDCLDQYGKGELTEEQLVKALTYDEKMFLIMHQGLLGENSDSEDDFDVQDWL EEEESFFMVVEVNENLCRQAESVLEEIGVEMPDAIEGFLNQLVEKKQFPVVINS >gi|237663593|gb|GG668925.1| GENE 41 35777 - 36151 482 124 aa, chain - ## HITS:1 COG:no KEGG:EF1894 NR:ns ## KEGG: EF1894 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 124 1 124 124 228 100.0 8e-59 MRLTEGIVVDSVLTFGKLRFSALRREVRKQNEDGTVSNEVKERTYNLKSSAQGRMIQVSI PANVPLREFAYDAEVELVNPIVDTVANYVFREGTTVNWFIKADDLVLKRQPNQGNSTNQI EGKK >gi|237663593|gb|GG668925.1| GENE 42 36164 - 36478 440 104 aa, chain - ## HITS:1 COG:no KEGG:EF1895 NR:ns ## KEGG: EF1895 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 104 1 104 104 195 100.0 5e-49 MELKFVVPDMAETFGKLSYAGEGEILTEGYGRNTTVIGRSYHLYSSKQRADDIEVVVAAE AGEKDFDQDQPLKAVNPHLVAKGYEIENRGFTDYVLYVDDLVKE >gi|237663593|gb|GG668925.1| GENE 43 36591 - 37379 655 262 aa, chain - ## HITS:1 COG:no KEGG:EF1896 NR:ns ## KEGG: EF1896 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 262 814 1075 1075 488 99.0 1e-136 MVIAETTTTLANKEKTGTWKIRHKLTTEQVLDKTIVLFNYVYENKEAFEAGDEPVAKDAS LNNQAQTVNCTVERHVSIQTKAHLEDGSQTFTHGDVVDMFDDVSITHDVLDGSKEAFETI LYALLPDGTNKEIWKSGKIDYEVNDKEFTKTMLAEKVDTGKFPESTKFTFAEINYDKDEN INGKHNEDLKEKNQTLTPKKVPTTPRTPKQPETPTVPSGYQESSPTVKTFPQTGEKNSNV LLFIGFTLIFATAGYYFWNRRN >gi|237663593|gb|GG668925.1| GENE 44 37545 - 39419 1668 624 aa, chain - ## HITS:1 COG:BH0361 KEGG:ns NR:ns ## COG: BH0361 COG4932 # Protein_GI_number: 15612924 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Bacillus halodurans # 142 550 1179 1531 1661 70 25.0 1e-11 MIWQEVNGYTLHSIKRLNGSAVNIAAIEAKINQAIADYQKKPSFHNSTAKIVLGQSTTMT DTNNLNLSEFDEVVENTANIDYRVNGNQLIITPNASSKESGVLTLKKSAGTGTPVAYKKV GQQTLMAGAIDKPNTYTVKIDVETEGSLKIKKVDKESGAIVPGTVFHLDFGKTLPAKDVT TDKEGIATLDGIPHGTKVTITEKSVPAPYTIDTIPMTATIKAGETIFMTSKNTREKGQII LDKTGIETGSDLWNDNYSLAGNTFAIRKDSPTGEIVQEMTTDEKGHAETPKEIANALELG TYYVTETKASNGFVNTFKAVKVELKYANQTVALVTSNIKGQNQEITGETTLIKEDKDTGD KTQGRAVFEGTEYTLFTAKDGKAVKWSEAFKPELVKGTKASDETVTLALDEKNQAAVKHL AINEYYWQETKAPEGYTLDETKYPVSIKKVDDNEKNAVITRDVTAKEQIIRFGFDFFKFA GSAAGTAETGFNDLTFKVSPLEGTNEITGAEDEAITAYNEQLGFDGYGKFENLPYGDYLL EEVEAPEGFQKITPLEIRSTFKENKEDFVKSEYVFTITEQGQKQPIKTVTVPYEKLTNKA FSVSLNRLMLYDLPEEEDSLTSLA >gi|237663593|gb|GG668925.1| GENE 45 39621 - 39935 371 104 aa, chain - ## HITS:1 COG:no KEGG:EF1896 NR:ns ## KEGG: EF1896 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 104 1 104 1075 222 100.0 4e-57 MIKPIFKKWRLFAALALLGQTIVGAIDPMIVFADEIAHPQTVTVELDLAHQYVVEGTFSD GRPMSEVTVPHYAVYNGVKQDVFCIEPGVPIDNEFTPGYEKNPL >gi|237663593|gb|GG668925.1| GENE 46 40015 - 40677 295 220 aa, chain - ## HITS:1 COG:no KEGG:EF1897 NR:ns ## KEGG: EF1897 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 220 1 220 220 377 100.0 1e-103 MKQDDGRIVWKNLSDLKLILLINQFIEKHEIKSSRQYHRKLLENPNSAPSMWFINQKYGS WKNLLVSLGCDNGEYGKWAKISEKDLLKIVESFITVEKITSQRMYEKRSVGKDVPSLSTL KKRFGDIRYLFRKNTEKSSFTDFELMIELRNEIVRLKLQDDLSMTKFRKLVQSPKLPSVD TIMKRTNKNWEELMTEIGFDYRKIKINKQRNNLSKKKKTK >gi|237663593|gb|GG668925.1| GENE 47 41048 - 41443 654 131 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227519245|ref|ZP_03949294.1| 50S ribosomal protein L19 [Enterococcus faecalis TX0104] # 1 131 1 131 131 256 99 4e-67 MAEVTIRIFGNKEKDKMNPLIQELTQEQLRTDIPAFRPGDTVRVHAKVVEGTRERIQLFE GVVIKRRGAGISETYTVRKVSNGVGVERTFPLHTPRVAQIEVVRYGKVRRAKLYYLRALH GKAARIKEIRR >gi|237663593|gb|GG668925.1| GENE 48 41539 - 42279 875 246 aa, chain - ## HITS:1 COG:lin1906 KEGG:ns NR:ns ## COG: lin1906 COG0336 # Protein_GI_number: 16800972 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Listeria innocua # 1 239 1 240 245 310 61.0 1e-84 MRIDVLTLFPRMFEGPMGESIIGKAREKQLLELNVSNFRDFSDNKHQTVDDYPYGGGAGM LLKVQPIYDNLKAIEEETNQQPKRVILLDPAGKPFNQKMAEEFSQEEHLVFICGHYEGYD ERIRTMVTDEVSLGDYVLTGGELGAMVMIDATVRLLPDVLGNNLSAQTDSHSTGLLEHPQ YTRPAIFNDMEVPAVLTNGNHKLIAEWQLKESLRRTFLRRPDMLESVEMTPEMLKLLEEI KQEEQK >gi|237663593|gb|GG668925.1| GENE 49 42269 - 42793 641 174 aa, chain - ## HITS:1 COG:BH2480 KEGG:ns NR:ns ## COG: BH2480 COG0806 # Protein_GI_number: 15615043 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Bacillus halodurans # 1 171 1 173 173 189 55.0 3e-48 MTDYLNVGKIVNTQGIKGEVRVISKTDFPEERYQKGAMLLLFQEKKAPIELVVKSHRKHK NFDILSFEGHPNINDVEKYRDGILKVAKDNLAELAEDEFYYHQIIGATVYDETGSELGKI KEILSPGANDVWVVQRPKKKDLLLPYIEGVVTKVDVENQRIDVDIPEGLIDDEN >gi|237663593|gb|GG668925.1| GENE 50 42901 - 44262 1521 453 aa, chain - ## HITS:1 COG:SA0956 KEGG:ns NR:ns ## COG: SA0956 COG1914 # Protein_GI_number: 15926690 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Staphylococcus aureus N315 # 17 451 13 448 450 480 58.0 1e-135 MKEKKTEKMLNYANGPSLEEINNTVEVPKNASFWRTLLAYSGPGALVAVGYMDPGNWITS IAGGAEYKYTLLSVILLSSLVAMLLQSMAARLGIVTGMDLAQATREHTSKRTGVALWVVT ELAIMATDIAEVIGGAVALQLLFGFPLLIGVLITTFDVLLLLLLTKLGFRKIEAIVSCLI AVIFFVFAYEVALADPNVGEVLRGFIPDTKIATDKSMLFLALGIVGATVMPHNLYLHSSI AQARKFDRNDDVEKAKAIRFTTWDSNIQLTVAFVVNCLLLILGGALFYGTNSELGKFVDL FDALKNPDIVGNIASPVLSILFAIALLASGQNSTITGTLSGQIVMEGFIHLKMPLWARRV LTRLLAIVPVIICVIIYGGSETAVEDLLLYTQVFLSIALPVSIIPLTMYTSDKKLMGQFA NPAWVKFLAWIIAIALTLLNLFLIYGTLTGLTN >gi|237663593|gb|GG668925.1| GENE 51 44459 - 44833 392 124 aa, chain + ## HITS:1 COG:no KEGG:EF1902 NR:ns ## KEGG: EF1902 # Name: not_defined # Def: glyoxylase family protein # Organism: E.faecalis # Pathway: not_defined # 1 124 1 124 124 248 100.0 6e-65 MKLDMVGIIVNDMTQALSFYQTLGFNVLEEASPDYTELQNNGVRISLNSLQMITGVYGFA PSQQGDKIELAFLCETAAEVDNTVKKMSQAGYIVFKEPWNAPWGQRYAIIKDVDANLISL FAPL >gi|237663593|gb|GG668925.1| GENE 52 45064 - 45663 745 199 aa, chain + ## HITS:1 COG:L114884 KEGG:ns NR:ns ## COG: L114884 COG0398 # Protein_GI_number: 15672877 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 7 197 10 201 201 178 53.0 7e-45 MSVTLSRKIVNIISILGIVATIIATIYFIRLGVFKDINALRGLVGQSVILGPIIFMLIQI IQVVIPIIPGGVSCAAGVLIFGPTMGFVYNYVGIALGSIIIFLLGRNYGKPFIMSLVSDK TYNKYIGWLDNEKRFERLFALAIFFPIAPDDALCLMAGLTKMSVKKFTLIILLAKPASIY LYSLALIYGGTFLTSLLGM >gi|237663593|gb|GG668925.1| GENE 53 45764 - 47566 1284 600 aa, chain + ## HITS:1 COG:L58914_2 KEGG:ns NR:ns ## COG: L58914_2 COG0584 # Protein_GI_number: 15673979 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Lactococcus lactis # 353 593 1 240 249 239 47.0 2e-62 MFSYFKNSIVNTLDFLKGTTAYFRDVLLMHGFMLFVLLPLLTSLSKLVLKEGGIDYISYD NLGAIATQHPYVLLTFLLIGLLILLALFFEFTFLLLSVYFIKKKQPITLTQLLHGTLLQI KKVRGITFLFFLAYFFLILPLSGLTFRSYLLTRVKIPAFILDFIFANRVIIIIGFVLLEL IILYLAIRLAFALPELILRDVGFRESLKRSWQITKRRFFQILGQFIIIGGTVLGIFTAGY FLIFLGQTAVETFKPEWSLPSAVIAMTLLQVMMLLNLVLSSVAIFYIIVDDMEDEGILPD TPEWFTPKSEVRVEWTTFRVVLFCLIAIIFGIGVGTYNTNYLSHTPDRKPVTISHRGVNG NNGVQNTLDSLIETNKAKPDYVEMDIQETKDHQFIVMHDFNLRALTGVNKRPNQLTLKEL TNMNVTENGQTAKMVSFDDYLAKANQLKQRLLIEIKTTPQDSPDLVQRFVKQYRENIFEN GHILHTLTYDTAMALKKEEPRFYVGYVIPFNIVGPPKMPVDFFTMEYSTMNRNFVNAAHH DGKKVYAWTANDEDVMTRMIFYGVDGIITDQLSLLNETMKTDLENPTYSDKLLNFAIGMG >gi|237663593|gb|GG668925.1| GENE 54 47709 - 48395 903 228 aa, chain - ## HITS:1 COG:SP1972 KEGG:ns NR:ns ## COG: SP1972 COG0670 # Protein_GI_number: 15901795 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Streptococcus pneumoniae TIGR4 # 3 228 10 235 235 161 47.0 1e-39 MNNQEYIQTGTGLNKFYAKIYGFLALGIGISAIMAYAMTTVFLPVLATLFQSSLAFWMIW LVEIGLVLYLGAKAQKNPTIAIAGFVAYALLNGVTLSVTLLMYTGGTVAGAFLSAAATFG AMSLVGVFTKKDLSAVGHAAYSALIGIIIAMLLNMFLLHSNAVEFFISILMVLIFSGITA YDNQRIRQVYAQTGDQAGTGMAVFFALQLYLDFINLFLAFLRIFGKNN >gi|237663593|gb|GG668925.1| GENE 55 48388 - 48873 653 161 aa, chain - ## HITS:1 COG:FN0816 KEGG:ns NR:ns ## COG: FN0816 COG2030 # Protein_GI_number: 19704151 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Fusobacterium nucleatum # 14 137 4 127 134 70 29.0 1e-12 MNIGKPRKLGKTIEDIEEGDSLSLTESIEDKDLLLYLGLTNDANPLYIQHDYAQKTEYEK PIVPSIMLMGIITSAISKHLPGPGSHVVNFSVNFVEPVFHYETLTFQLEVIKVDKMKDVI TISVEAVNEQENRVLDAVVMVQPPQVTIDELTEKEGTLTYE >gi|237663593|gb|GG668925.1| GENE 56 49071 - 50408 1475 445 aa, chain - ## HITS:1 COG:lin1646 KEGG:ns NR:ns ## COG: lin1646 COG0773 # Protein_GI_number: 16800714 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Listeria innocua # 8 439 3 433 447 555 60.0 1e-158 MGNQENKLYHFVGIKGSGMSSLALVLHQKGYNVQGSDVEEYFFTQRDLEKSGVPILPFNA DNIDKDMIVIAGNAFPDTHEEIARAIELGAEVIRYHDFIARFIEPYTSIAVTGSHGKTST TGLLAHVLSGINPTSYLIGDGTGHGEPDADFFAFEACEYRRHFLAYSPDYAIMTNIDFDH PDYYKSIEDVFSAFQTMAHQVKKGIFAYGDDKYLRQLESEVPVYYYGVSEEDDIQARNIQ RTTEGSSFDVYHKDDFVGHFVLPAFGHHNIMNALGVIAVAYFEKLDMQKVAEEMLSFKGV KRRFSEKKVSDMIIVDDYAHHPAEIKATIDGARQKYPDKEIIAVFQPHTFTRTIALMDEF AEALDLADEVFLCNIFGSARETQGEVRIEDLGEKIQKGGQVITEDNVSPLLDFENAVVVF MGAGDVQKFEQAYETLLSNTTRNVL >gi|237663593|gb|GG668925.1| GENE 57 50563 - 50961 557 132 aa, chain - ## HITS:1 COG:no KEGG:EF1909 NR:ns ## KEGG: EF1909 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 132 183 314 314 209 100.0 3e-53 MKKDRRSYVILDDEPTAFQVKDTEEDPTVRKFNIPTSEPEIPLTRRQYQQIKPDLERFGE DALDLRSRSRLNAAKKNAKSQTAYGKKLAKANAQVEPEAPVTEEKKKGILDKPLSGMLED SSSVLENSKYFS >gi|237663593|gb|GG668925.1| GENE 58 51099 - 51506 471 135 aa, chain - ## HITS:1 COG:no KEGG:EF1909 NR:ns ## KEGG: EF1909 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 134 1 134 314 190 99.0 2e-47 MDNAQVKRKHFRFPAYDDEQGVKLPTDNERNLFQDDLIGKAMSGSRRTATSAEDTRQSTP SVQQPTTNQSTTNKQTQQLTAAQQEQLARHRSNLPDYTKHASKATKNKQATKKNNSLFGT PKGNGWTQTYKKKKS >gi|237663593|gb|GG668925.1| GENE 59 51633 - 52592 1134 319 aa, chain - ## HITS:1 COG:lin1983 KEGG:ns NR:ns ## COG: lin1983 COG4129 # Protein_GI_number: 16801049 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 1 312 1 312 327 224 41.0 2e-58 MKIGLRTVKTAISAALAMIIAEKLGLLYAPSAGIISVLSVTSTKKTSVMTGIYRLLSLAL ATILAYICFTFLGFTAIAFGIFLLLFIPAAVYFQLSDGIVVSSVLVTHYLVEKNLSWAII GNEFLLMSIGVGLALLANSYMPDTEKRLREDQEVIETMFRKILREMALHLNNAAGERNLV MHCADLKTFIRTGETWAKNHAENQLLSTNTYYLEYFAMRKMQSNILKNMLELLEDITVDA QQVRYIQQLLEYTAETFAENNDGQEIMNRIKTVYETYRTKPLPQTRSEFENRARLFQFLQ LFQSFIQVKADFAKLQLDK >gi|237663593|gb|GG668925.1| GENE 60 52695 - 53306 648 203 aa, chain + ## HITS:1 COG:SPy1879 KEGG:ns NR:ns ## COG: SPy1879 COG4129 # Protein_GI_number: 15675698 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 3 152 15 164 183 133 45.0 2e-31 MIVGRFRLGMRTLKTAIAVMLCILLFQFFHRGSPMIACLAAVFSLRQDLNTSLSFGKSRI IGNTLGGFLALLYVLAQDYFPNQHLVELLLLPLLVIIVIVVSDGINNNAGIISATATLLM ISLSIPQSDSFQYAMERVLDTFIGTFIAIGLNVFLQPKPAEEAHEISEDLAELEKKEKEL EALRQQVQARIAAEENTDDKANK >gi|237663593|gb|GG668925.1| GENE 61 53347 - 54228 1091 293 aa, chain - ## HITS:1 COG:L118696 KEGG:ns NR:ns ## COG: L118696 COG1940 # Protein_GI_number: 15673470 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Lactococcus lactis # 1 285 1 283 293 262 46.0 6e-70 MAILAFDLGGSSVKYGVWTGKELTNQGSFPTPGSWEEMKAHLYSVYADKRNESISGVAFS SPGVVDEKSQQILGISAIPYIHHFNIYEELEALFGLPVTIENDANCAGLAEIYEGAAKGK KEVLFVVIGTGIGGAIFRNGELYKGAHLYGGEFGLNFLSNGQTFSEIGTAVKMAQRYCER IGVEKQAVTGEEVFELAQRGDEIAREEVNNFYDYLTQGLFGLQFSYDPEMIVLGGGVSAK EGLLAEINRRMLTHLQTFELKDFVPEIVTCHYQNDANLIGAAANFQAKTNWEL >gi|237663593|gb|GG668925.1| GENE 62 54231 - 54533 326 100 aa, chain - ## HITS:1 COG:L122982 KEGG:ns NR:ns ## COG: L122982 COG0759 # Protein_GI_number: 15673654 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 77 1 77 88 97 59.0 6e-21 MKNPLIGGVRFYQRFISPGLPARCRYYPTCSQYMIDAIHTHGSVKGTTMGVARILRCHPF VKGGIDYVPLKFRLTKNPDETYHGPYTYRRNKKTEVEKDG >gi|237663593|gb|GG668925.1| GENE 63 54711 - 54863 228 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGLKFERSNDLDKLFDSFAVDPLKKEVPLEELAKQRQEVKKEEAKKQAKE >gi|237663593|gb|GG668925.1| GENE 64 54880 - 55461 732 193 aa, chain - ## HITS:1 COG:SP1568 KEGG:ns NR:ns ## COG: SP1568 COG0218 # Protein_GI_number: 15901411 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Streptococcus pneumoniae TIGR4 # 1 189 3 191 195 296 74.0 1e-80 MNVHNAEIVISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQ TLNFYLIEDALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPPT QDDIQMYEFLKYYDLPVIIVATKADKIPRGKWNKHESVIKKALNFDKQDDFIIFSSETKE GKEAAWTAIEKFL >gi|237663593|gb|GG668925.1| GENE 65 55559 - 56812 267 417 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 154 395 248 444 466 107 32 3e-22 MYDNTDNNGTVRCSFCGKTQEEVKKIVAGPGVYICNECIDLCKEIIDEEFYDEAVRELTD VPKPQEILNVLNEYVIGQERAKRTLSVAVYNHYKRVNQSETAATQDDVELQKSNICLIGP TGSGKTFLAQTLAKTLNVPFAIADATSLTEAGYVGEDVENILLKLLQSADYNVERAEKGI IYIDEIDKIARKSENVSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDT TNVLFIVGGAFDGIETIVKNRLGEKTIGFGKTNSALNEEESIMQHIIPEDLLKFGLIPEF IGRLPVMAALDKLTNDDLVRILTEPKNALVKQYQKLLSLDDTKLEFEPEALKAIAAKAIE RNTGARGLRSIIEEIMMDVMFDVPSDESIEKVIITKMAAEGTGKPTIIYNKKDKEAV >gi|237663593|gb|GG668925.1| GENE 66 56971 - 58032 1194 353 aa, chain + ## HITS:1 COG:SP1506 KEGG:ns NR:ns ## COG: SP1506 COG2706 # Protein_GI_number: 15901353 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Streptococcus pneumoniae TIGR4 # 12 352 1 335 337 348 53.0 1e-95 MIVLKQIGGIVMLEQILLGTYTRRASQGIYKIALDTTQGRLTEATLLLEETSPTYLALSQ KGELFSVTSVDGEGGTAAYQPEMDHFNLLNKVTEEGAPPCYVAVDENRQLVYAANYHQGI VHVYRILEDGSLEDADKVIHTEPTGPHENQNNAHVHYTDLTPDQRLVVCDLGTDRVYTYN VSLDGKLSEIAQFVTEPGTGPRHLVFHPTKSLAYLFGELDSTVSVLSYDETDGSFTELQK VSTLPADYDAFNGGAAIRISSDGRFLYASNRGHNSIAVYAVSENGEAIERIQLISTEGDI PRDFDLDPSEDFIVVANQDSDNLTLYRRNQETGLLEMIQKDVAVPECVCVLFV >gi|237663593|gb|GG668925.1| GENE 67 58111 - 58599 314 162 aa, chain - ## HITS:1 COG:no KEGG:EF1919 NR:ns ## KEGG: EF1919 # Name: not_defined # Def: acetyltransferase # Organism: E.faecalis # Pathway: not_defined # 1 162 1 162 162 313 100.0 2e-84 MKIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEM IFSMATFCMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTN HRMIRFFESKGFTKIHESLQMNRLDFGSFYLYVKELENQSIV >gi|237663593|gb|GG668925.1| GENE 68 58611 - 59984 1428 457 aa, chain - ## HITS:1 COG:VCA0665 KEGG:ns NR:ns ## COG: VCA0665 COG3069 # Protein_GI_number: 15601423 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Vibrio cholerae # 1 456 5 456 459 223 36.0 6e-58 MIESLLVLVVLVVVAYLIVKNYHPALSLIIGALVLLACAWMLGHPIYPAGEGTGFGLFDI FLKFKDTIIAQVSSAGIVIMILFGYSGYMNAIGANQMAVNFLVKPLMKIKRKSLFVPVVF LIGNLMSLVVPSASSLAIILMSILYPMLASMGISSLTAAGVIAMTATIMPTPLGADNVIA ANTLGYDVLNYVVWNAKISLPSLLIIAVAQYFWQKYCDKKEGEAAYVSLNEEGLSKQKEF DVPKFYAILPILPLLLIVGVGIAGMFIKGITMDIFVLTFISFFIAVLVETLRLKSFKKVQ DTAVEMFKGMGQGFSQVVMLVVGGSLFTSAIQTLGIIDSIMASVEASSSAGIVTTLIFSG ATTLFGILSGGGLAMFYAVIELIPGIAEKAGIDGILISLPMQMIANLTRTISPVAAVVMI VASTVGVSPIRILKRTSVPTIIGIISVIVLSILLLPY >gi|237663593|gb|GG668925.1| GENE 69 60001 - 60921 1057 306 aa, chain - ## HITS:1 COG:STM0051 KEGG:ns NR:ns ## COG: STM0051 COG1957 # Protein_GI_number: 16763441 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Salmonella typhimurium LT2 # 8 300 7 300 306 266 48.0 5e-71 MDTKKRPIIIDTDPGIDDAVALAIALNHPNLEVRLITTVAGNVDVEKTTNNALKLVDFFG KKVPVAKGCNCPLLIQLEDSAEIHGETGMDGFEFPQPISTCLDIHAVEAMRKEILSSDVP LTIVPIAALTNIALLLTLYPEVKENIAEIVMMGGSLARGNTNTSAEFNTYVDPHAAQIVF QSGVPLTMVGLDVTSQAVLTNHEVTAIRALGRVGEMFYGLFRHYRGGSLTTGLKMHDVCA IAYLTSPELFETTETFIEVALEGPAAGATVADLKMKYHKNTNAVACIDVNVEAFQKWVVE KMKAVN >gi|237663593|gb|GG668925.1| GENE 70 61104 - 63014 1669 636 aa, chain + ## HITS:1 COG:PA1950 KEGG:ns NR:ns ## COG: PA1950 COG0524 # Protein_GI_number: 15597146 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Pseudomonas aeruginosa # 323 621 2 305 308 180 36.0 7e-45 MNIKDIAKLAGVSASTVSKIINNKDQTISKETRERVLKIVRDYNYTPYSANLVTNSTTKT FVLLLNSHETFEAWVTSFIDKAQENGYNCLILNSHGSLEQELKNITSPTLKQASGIIWDP INENSKQYAKFIEELTIPYYFVNHSTNELPSLAGLYEEASYVLTQELLQNNHKKISYFVT NPKYKEAIIAGYKKALFDVNLPFSKENILTTIPADFSNQLITDGITGILTDDYTQAVFLE QLLKQSGLRTPDNYSLLAIKRKIDRSFLPDHISSVLLDTETFGSKLALLLLNKRKEKTAL INEAEKLVLDHKNTLGMSSVNPHSKMIVVGSLNVDNYLYSTNLPHNGKTNFLSSYAKFPG GKGLNQAVGLTKLGHQATLIGCLGSDTDANYLYKELEKYHVTTDGITRIQDTETGQAYIY VETSGDSMISILPGANTALTPKKIAQQKHLFMDASFCLIQTEIPLSAVEKACEIAQHSGV PIILKPAAIHHIPVNILEKVDFFIPNEDELLELQPDTGTLEEKAAYFLEMGVKNVIVTLG KKGVLLKTPQVCHYFPATENIAVDSTGASDSFISALASYLSKGYPTEAAIQIAIQAAGFS VSKEGVIDSLVDHVTLENYLIKKEPALFAHRNTCID >gi|237663593|gb|GG668925.1| GENE 71 63198 - 64640 988 480 aa, chain + ## HITS:1 COG:no KEGG:EF1923 NR:ns ## KEGG: EF1923 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 480 1 480 480 877 99.0 0 MAVFLYLAKQTNLDLSSVARKFALSTKNLSIYLREIQEDLATLPENTLEIQIHHGKISLH TTSNDFLSHYFLLFNYYCVHSTDFILFQAIIKKENNSVWKVSQETNFSSSYIYKRLNNIN KLFGLYGISVHFSPSASKVITGSEFQVLYAFLDVYWTIFLNTLALPRYTSTYFEDILTQH IKPEILERLEHASLLKLNLLLHIAKYRFPYTCEDDLQKEFEEHPYLRLFSDSKQTIFCSQ SNFSEDQQRVVDIIAPIAIDNFDSAKRAKDLLAALNEISCPEYFYVDSLLTNFCEVFQIP KMREFDRHYFLLILFKNIIYNQLFISQQPNTAILDFLVNKNSTYQKDLQKKIYAFYQNFS AHSPYQLRFKDQENPIWTCELLLRIYKHYSPRKKIKIGVAYSRDFYIASFIMMKIKQAFS EDIIFERTDFSGCDIVITDYPLFDLPKEIDRIYILEEELTREDWELIFSKISIAIFDLQY >gi|237663593|gb|GG668925.1| GENE 72 64943 - 65788 710 281 aa, chain - ## HITS:1 COG:no KEGG:EF1925 NR:ns ## KEGG: EF1925 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 281 1 281 281 470 100.0 1e-131 MAKQKNFYDTYDALFQKPKWSFFPVTRTDTAKQLPNPNKKVVKPQTKKKKKQKKNKKIIW IGIAVAIGFIVYIDLAEKDDYWDYSASSEDVYPLKEAGLTTTGPVDLEKPLKVTIEENKL LFNQGYQIEIIGDADIETSGGKNFLILPSTEEYPDTKYLGNISFYEKRDYYTSAGMYLSG NLVNSLSDYLDTSKEFIKAYPIDKIADVQTGYILKRNQGYTDISKYYLFKDGTGFELEVS VDQLEKVKDPKDYSSFVKTYAKEVTFIEKSFKFESTDEESR >gi|237663593|gb|GG668925.1| GENE 73 65781 - 66320 390 179 aa, chain - ## HITS:1 COG:L175712 KEGG:ns NR:ns ## COG: L175712 COG4915 # Protein_GI_number: 15673319 # Func_class: R General function prediction only # Function: 5-bromo-4-chloroindolyl phosphate hydrolysis protein # Organism: Lactococcus lactis # 29 162 63 195 208 74 29.0 1e-13 MNGIMVLLVGTGYIGWVTYRNGRTYFRYKKNLKKYQTTHHLTDSDLEMYQRIMDELKKQI IYLNELTNKSRNLKKIEQVKLGVASAKGIFKHLVKYPEAITHFSDFLYHKVPEILRASER FLSIKEDKLSTEEITLATNGILSTIRVLSESITDDYERLVSEASEEIALSKKLVERKNG >gi|237663593|gb|GG668925.1| GENE 74 66595 - 67314 1138 239 aa, chain - ## HITS:1 COG:lin1574 KEGG:ns NR:ns ## COG: lin1574 COG0580 # Protein_GI_number: 16800642 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Listeria innocua # 3 235 4 236 272 258 59.0 6e-69 MGTSMMTQLFGEFFGTMILVLLGDGVCAAVNLKKSKAFASGWVVIALGWGAAVTLAVYMS GYMSPAHLNPAVTVAMAITGNFEWGMVLPYIVAQVLGGFIGGLVVWLAYLPHWNITEDKG AILGTFATGPAVRNYPANVLTEIIGTFVLVFGLLAFSQNDLAAGINPMLVGILVLGLGLS LGGPTGYAINPARDLGPRLAHQIIPVKTKGDSDWAYSWVPIVGPILGASLAAVIYLFTI >gi|237663593|gb|GG668925.1| GENE 75 67322 - 69151 2164 609 aa, chain - ## HITS:1 COG:SP2185 KEGG:ns NR:ns ## COG: SP2185 COG0578 # Protein_GI_number: 15901992 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 607 1 607 608 745 63.0 0 MTFSIETRRQSIDALKTQHLDVLIIGGGITGAGVALQASAAKMKTGLIEMQDFAEGTSSR STKLVHGGIRYLKTFDVEVVADTVKERAVVQSIAPHIPKADPMLLPIYDEPNATFNLFSV KIAMDLYDQLADVTGTKYANYLLTKDEVLAREPQLKSEGLQGGGVYLDYRNNDARLVIEN IKQAVADGAHAVSRVQAVGFLYNDEGKITGIQAKDLLTDEQFEIHADVVINTTGPWSDKL RGLDKNDSFTPQMRPTKGVHLVVDKSRLNVPQPTYFDTGKQDGRMVFVVPREEKTYFGTT DTDYHGDFQHPTVEQSDVDYLLEVVNNRYPEVQLTIDDIEASWAGLRPLISANGGSDYNG GNNGKLSDKSIDEVIDVVDRYQKNQTDKREIEEVLNHLEDSLVENKVNPSAVSRGSSLER SADGLLTLAGGKLTDYRKMAEGAMKMIQTILAEEYQKEFTLIDSKNYPVSGGKLNPATVD EELEALAKHGVSKGLSEKDALYLAHLYGSNVPTVFEMIDDAKVIPGLTLTETVSLNYAME EEMALTPVDFLLRRTNHLLFMRDRLDQVKAGVIEEMAQHYQWTAEERARHIETLEKVIEE SDLKNLKVG >gi|237663593|gb|GG668925.1| GENE 76 69172 - 70677 1743 501 aa, chain - ## HITS:1 COG:L0014 KEGG:ns NR:ns ## COG: L0014 COG0554 # Protein_GI_number: 15673228 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Lactococcus lactis # 1 497 1 498 498 789 77.0 0 MAEEKYIMAIDQGTTSSRAIIFDKKGNKIGSSQKEFTQYFPNAGWVEHNANEIWNSVQSV IAGSLIESGVKPTDIAGIGITNQRETTVVWDKATGLPIYNAIVWQSRQTTPIADQLKEDG YSEMIHEKTGLIIDAYFSATKVRWILDHVEGAQERAENGELMFGTIDTWLVWKLTGDTHV TDYSNASRTMLFNIHDLDWDQEILDLLNIPRVMLPKVVSNSEVYGLTKNYHFYGSEVPIA GMAGDQQAALFGQMAFEPGMVKNTYGTGSFIVMNTGEEPQLSKNNLLTTIGYGINGKVYY ALEGSIFVAGSAIQWLRDGLKMLQTAAESEAVAKASTGHNEVYVVPAFTGLGAPYWDSQA RGAVFGLTRGTTREDFVKATLQAVAYQVRDIIDTMKEDTGIDIPVLKVDGGAANNDFLMQ FQADILNTAVQRAHNLETTALGAAFLAGLAVGFWKDLEEIKAFQEEGQQFEPIMAEEERE DLYEGWQQAVAATQQFKRKNK >gi|237663593|gb|GG668925.1| GENE 77 70954 - 72420 1161 488 aa, chain - ## HITS:1 COG:no KEGG:EF1931 NR:ns ## KEGG: EF1931 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 488 1 488 488 877 100.0 0 MKVETLLEKKAMRQLLTVQQTILAGGTCSVSDLTAFLAVTKASFEKDLEDLHYFLKPFGQ DCQLTYDGQQLSITLSDFFSLNHLIEAFVKESLKFQLLDYLYRNKEFSIVQLTTKFMISE SSLFRKIKELNQLLAVFDLQIKNGQLQGEELQIRYFYFQLYWYITPYEIHQKKTMSPLNK RIIEGIETGLGFTFNEHNALKVSLWLSITKKRLAVTSKKYQQLRKKMIDFKEDPLFKQVR QLFFRFSSRYSLELDEGESMIHFVFLITMSVLPESAFDEYSLIRGRRSAVSLADTFILEN VVLYYRPHKFEPTLEKTMAYYFSQIHGKLYFFKGELEVFDRAHIWEKEQQLSSRELASFS TTLLEKALACFDETYQPGDSLHELSLVKYLSVLALIEFKMIGEIKIGIHLAMDALYQAAL TQVLMLSLKNMNGTLVERYQPEQTYDLIVTNYQQTSYQGTPEVYVLSELSSTYDVQQLKK KIRTLREK >gi|237663593|gb|GG668925.1| GENE 78 72410 - 73744 1179 444 aa, chain - ## HITS:1 COG:pli0044 KEGG:ns NR:ns ## COG: pli0044 COG0446 # Protein_GI_number: 18450326 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Listeria innocua # 1 436 1 442 454 166 27.0 6e-41 MKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARY ITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRG SQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENL LPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQEISCDSGIFALNL HPQLAYLDKKIQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVR TGLVVANNLEEKTHRFIGSLRTMGTKVGDYYLASTGLTETEGLFFPQTLASIIVRQPAPP LQHGTEILGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQP SLTNIYDITNLMGASAYWRENDES >gi|237663593|gb|GG668925.1| GENE 79 73924 - 74280 396 118 aa, chain + ## HITS:1 COG:no KEGG:EF1933 NR:ns ## KEGG: EF1933 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 118 1 118 118 184 100.0 1e-45 MSATKEQLELFLFYLSETHTKSLSLHDLVTSRPRPEEARILLNINEVFTYYHSARVLYTS VPALENNKSEPFFQAFENFYFELKQHFFNEEDETNQLNERLEEMKIAFEQLTDDYNVL >gi|237663593|gb|GG668925.1| GENE 80 74314 - 74475 186 53 aa, chain + ## HITS:1 COG:no KEGG:EF1934 NR:ns ## KEGG: EF1934 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 53 1 53 53 68 100.0 1e-10 MKQEEVIERLKEELNLPFFNGMLEEKNYSEADYQQIKKELIQYFDDYVRNVEN >gi|237663593|gb|GG668925.1| GENE 81 74447 - 74593 95 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIMCEMLKINKLKQPLILIKSKVVLLLNKKNNKKTTGSFADGKGVFTQ >gi|237663593|gb|GG668925.1| GENE 82 74720 - 75157 628 145 aa, chain - ## HITS:1 COG:no KEGG:EF1936 NR:ns ## KEGG: EF1936 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 3 145 1 143 144 263 100.0 2e-69 MVMRPNLRFYVQTINDIVKTTEDIGEVMNPYYEEVRQAIDKNKVNDLTAERIAEIQAKFK EGTEKYELMLKKVGTLKPTPQVLGIHKKFQHAYTEYVAGCNEMILATDPETGIDADLFNA SEEKQDQATDELTFAITRMSNILLK >gi|237663593|gb|GG668925.1| GENE 83 75227 - 75763 402 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227385040|ref|ZP_03868434.1| acetyltransferase, ribosomal protein N-acetylase [Jonesia denitrificans DSM 20603] # 9 175 2 168 173 159 47 6e-38 MKRKIIFETQRLIVREWQSEDEVELKKFLQDENVMYAYEHAFSDEEVANWLKWNLQSYQE YGYGLWALEKKRTGEVIGECGLTNQLVKGKSYPEIGYHLCVKEWHKGYAIEAAAATKQYA FDVLNFPEVISTIRDTNLASMNVAIRNQMLVRDRYIKTYRGKTMPHYVFSVKNQKNED >gi|237663593|gb|GG668925.1| GENE 84 75833 - 78538 3349 901 aa, chain - ## HITS:1 COG:SPy0623 KEGG:ns NR:ns ## COG: SPy0623 COG0474 # Protein_GI_number: 15674699 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pyogenes M1 GAS # 6 899 3 888 893 1126 66.0 0 MSEEKKTQLSEAFYAQDDTVVLEKMNTTTDGLSAQEAQKRLETYGENVLDEGKKKSLAVK FFEQFKDFMIIVLLAAAVISAVFSHDVVDSIIILVVVILNAIFGVIQEAKAEQAIEALKE MSSPNANVRRDGHVITVKSDELVPGDIVLLEAGDVVPADLRLLEANSLKIEEAALTGESV PVEKEVTILEGTDIGIGDRINMAYSNSNVTYGRGLGVVVGTGMNTEVGKIAGMLASEQET ETPLKQNLNQLGKMLTIAILVIAAVMFVVGMMNGRSWIDMLLTSISLAVAAIPEGLPAIV TIILALGTQKMAKKNAIVRKLPAVETLGSTDIICSDKTGTLTLNQMTVEALYTDGQVLSA STEIPADNMALKIMNFTNDTKIAQDGSLIGDPTETALVQFGLDHAFNVTEKVAAEPRVAE IPFDSDRKLMTTVHELKTGGFLVSVKGAPDELLKRCTEILSNGETSPLDETKRQEILKTN TSLAKQALRVLGMAYKYVETIPAEMSSELVEKDLTFAGLVGMIDPERKEAADAVKVAKEA GIRPIMITGDHRDTAEAIAARLGIIKEGDDDAVITGAELNELSDEKFAQVVGHYSVYARV SPEHKVRIVKAWQQEGKVVAMTGDGVNDAPALKAADIGIGMGITGTEVSKGASDMVLADD NFSTIIVAVEEGRKVFSNIQKTIQYLLSANLGEVLTLFIATMLNWDTLLPVHLLWINLVT DTFPAIALGVEPAERDVMSHEPRGKKSNFFSGGVLSSVVYQGITQGALTLIVYKMSIMFP AHTAANTNLSAQALYDLQHGDALTMAFATLGLIQLFHAFNVKSIYQSIFKVGLFRNKSFN YGILVSFLLLAATIVIPGFNDLFSVTHLDAYQWAIVAGTSFAIIPIVEIVKFFQRKAGKG A >gi|237663593|gb|GG668925.1| GENE 85 78856 - 79506 559 216 aa, chain - ## HITS:1 COG:no KEGG:EF1939 NR:ns ## KEGG: EF1939 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 216 1 216 216 356 100.0 4e-97 MWKKKIVLSFLFYLISALGISLTIQAGVGVSSFNAFNVTFATLTHLKVGTVTTAINFAFL GTCWLLDQQRKIQDYLIILVALIGFGFVINFFLYQLFGSLVFQNYLVKIVLFILGTIIAG IGTGQVVALGVLQFPIEKFCTLISERTRYSFQFYRYLVDIFCVSLALGLSISYHLPIFVR EGTVISLFLLSWVISWSRKRGQQRILRIQIKKLESE >gi|237663593|gb|GG668925.1| GENE 86 79595 - 80260 521 221 aa, chain + ## HITS:1 COG:ECs3055 KEGG:ns NR:ns ## COG: ECs3055 COG0664 # Protein_GI_number: 15832309 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 22 219 2 208 219 118 34.0 7e-27 MLKTAYQRSPKQELAKNTPFFNETDLKHSFIIDFENQEFIHHQAEPLNYLFYLIKGKAKI LKTERNGRQSIVQFLTAGDLIGDLTLVQAETITKDVIALGETCCLAVPLAYAETVLKNKV LFMQQLSHYLGKKMLQRVDHFTTNQTYELSYRLAELLLVAANHEDVYKEKHTEIAEYLGV SYRHLIYTFKQFRERGFIQKQGTAYHINRLALHSFVQKMKS >gi|237663593|gb|GG668925.1| GENE 87 80332 - 80727 468 131 aa, chain + ## HITS:1 COG:no KEGG:EF1941 NR:ns ## KEGG: EF1941 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 131 1 131 131 236 100.0 3e-61 MEQASFTVSSWQEQPIDNLNENFPVNQASATYQLSGALSGTASVEYLMTYQGSSMADGLE AVAQVVGFLHFEGTYLGKKGTFTACEKGTFTQGLLDCPGKLFQASGELAGLSGRYTYEFS QEEALLHLDFV >gi|237663593|gb|GG668925.1| GENE 88 80837 - 82018 1050 393 aa, chain + ## HITS:1 COG:lin2916 KEGG:ns NR:ns ## COG: lin2916 COG0477 # Protein_GI_number: 16801975 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 2 381 3 386 396 268 43.0 1e-71 MKNTRNTVPSLLIIILLVGFPQISESIFTPILPALSSAFNIHDSVAQLTMSIYFVAFAVG VLFWGILSDTIGRRPAMLLGILCYLIGNIGLFLSPTFPWLLFFRLIQAFGASVGSVITQS MMRESFNDLQRGKIFAQTSAALSLSPAIGPLVGGLVQTYFGYQHVFSTLIVMAVLLLFYS FYRLPETFHLGNTLTKAPFWSVAKRLSFDSKVWCYGLLIGGINGLLFSYYAEAPFIFINH FGFSSVQYGFLGLVLAVSSILAAVLINWLLGYWSAEKIAFAGLLLSIFAACCLLIMTQFE TIIGLILFIFLFFLGINITLPNALSMALKGYESVIGTASGIFSFVYYLFVSFFTYLISYF HNGTIWVLPLYFLSFACLLAFSYYVIVYRKTLK >gi|237663593|gb|GG668925.1| GENE 89 82115 - 83950 1588 611 aa, chain - ## HITS:1 COG:mll7848 KEGG:ns NR:ns ## COG: mll7848 COG1368 # Protein_GI_number: 13476512 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Mesorhizobium loti # 9 609 39 641 653 191 27.0 5e-48 MKKRVEKFRRWPYRYLLYGIGFILLIIFSNLYLQWCQNNLSVDLAFKFAFSWHTEKFFLG CFVLSVFLLFLCSLAGSLGVGALLYSVIIGVLGFADYQKMFYRVEPIYPDDLKMITEVSL LKEMVGLWPFIFVVALGCVALFFLGKAFYKSFFLSKKKQTIRVLSLVLSIGLFSYIGDFN NPQNLLRKAYNKTALWIPYSQKMNYYNTGFIGGFLYNLKVEAMDQPKGYSKEAISEITQK YQKLAEAKTLPSNEQPNIVFVMSESFSNPDHLKGLSIIGNPLADYQQIADKTYSGQMLSQ NYGGGTANIEFEALTSFSMELMNAQMTTPYTMMIPKMTELPSIVSLLKEQKYQTTAIHPY NTSMYKRKDVYKILGFDQFINEKTMNYTDKLENNPYISDQAAYQEVTTLLKEKEQPQFIH LVTMQTHMPYENKYTTSNYFSQGNGNQVALNNYLQDIAYSSEALKNFLQEIEKMPKRTLV VFWGDHLPSIYDENIQALNEGAALHQTEFLMYDTANQLTEKNQHQAIISPFYFAPSLFQQ SGLPQSGFYAMLNEVQEQLPAFEKGNYYLGGEWKKTVEMNKKQEQLYEEYRLIQYDIVSG KQYSLENQFFS >gi|237663593|gb|GG668925.1| GENE 90 84055 - 84156 85 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLFVAKIIFQWYSNNGISLSVIVAFLEYFMKGE >gi|237663593|gb|GG668925.1| GENE 91 84159 - 84308 272 49 aa, chain + ## HITS:1 COG:no KEGG:EF1947 NR:ns ## KEGG: EF1947 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 49 1 49 49 79 100.0 4e-14 MTYKVKNIQYRIQLDTDKNIFIVFDAKNESKTATGHTIEEAIAHLKQLN >gi|237663593|gb|GG668925.1| GENE 92 84459 - 84809 380 116 aa, chain + ## HITS:1 COG:lin0899 KEGG:ns NR:ns ## COG: lin0899 COG5646 # Protein_GI_number: 16799972 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 2 110 8 116 130 101 49.0 3e-22 MTIIANYIRQQPQHQTQLTEIYQAILAVVPQETTEKIAYGMPTFYLNGNLVHFAAAKQHL GFYPTPSAIQRFSKELRPFKTSKGAIQFPYTQELPLSLIQEIVKFRVQENMKTGSH >gi|237663593|gb|GG668925.1| GENE 93 84820 - 85170 401 116 aa, chain - ## HITS:1 COG:lin0147 KEGG:ns NR:ns ## COG: lin0147 COG4898 # Protein_GI_number: 16799224 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 115 1 115 116 160 73.0 4e-40 MTKPKIYTMTFASVYPLYIQKAERKNRTQAEVDEIIYWLTGYDEKGLQQQLAQKVTMETF FEEAPNFNENAQLIKGVICGYRVEEIEDPLMQKIRYLDKLIDELAKGKAMEKILRT >gi|237663593|gb|GG668925.1| GENE 94 85244 - 86248 1190 334 aa, chain - ## HITS:1 COG:lin2106 KEGG:ns NR:ns ## COG: lin2106 COG2222 # Protein_GI_number: 16801172 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Listeria innocua # 1 334 1 331 331 407 56.0 1e-113 MLKFNEEQQIKDIRGALALRSDVEKVVDQVWTKGFDAVYYLGIGGTYASAMQAVTYANGK SNLPIYVQHAAEYYTTGNKRLTEKSFVILSSVTGTTQEVVQAVQEIKKVGATLFGFIDAK DSLLADLCDYVVTYPAPGTEQIKFFMVADRLMQKNNEFTDYENYYQELEEYLPTGLAEAE KSADAFGLAFAEKHRHDSIHYFIGAGNQWGAVYSYAMCYWEEQSWLRSKSIHAAEFLHGT LEIVDETTPVTLFIGEDEQRPLAERVAKLLPKICANYTIIDSKAYELPGISEKYRGRVVS FLLMHAVTQRIDAHVEKLNCHPLEIRRYYRQFDY >gi|237663593|gb|GG668925.1| GENE 95 86242 - 87318 826 358 aa, chain - ## HITS:1 COG:lin0034 KEGG:ns NR:ns ## COG: lin0034 COG0449 # Protein_GI_number: 16799113 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Listeria innocua # 3 348 4 354 361 301 45.0 1e-81 MKTMLDYINEEQAALTQILNQFQLTDTDVSKVTHCLILATGSSHNACQAAKVYLEEVAPI YVEIQEPFNFAHYGKVDDRFDLVVAVSQSGKSASTIDAIAKIKNQTSVKTVALTSDVTSP ITEVVDEVLDLKIGLETVGFVTKGYTATLLNLFLFGLKLGYQKHQLTKVEVEEELAKLTK AIQEIDSVIYKTEQFWQKTKKELTEGTRFIAIGYGPNIGTAKEFETKFTETVRLPSQGFE VEAYMHGPYLEADNTHLLFFIENQSPIQARSQALKNYLASYVGQCYTITTRSTRASNTLD LASDVEEKISPLLLVIPFQYLAHQVATSKGIDLSQRIFDDFDCVLKSKIAKKEGNQPC >gi|237663593|gb|GG668925.1| GENE 96 87329 - 88159 998 276 aa, chain - ## HITS:1 COG:STM4538 KEGG:ns NR:ns ## COG: STM4538 COG3716 # Protein_GI_number: 16767782 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 6 276 9 278 278 378 69.0 1e-105 MTKTSKTKTENLITKKELNQVFWRSFQMEFSWNYERQMNMAYVYAMIPILKKLYPQKEEM AAALKRHLAFFNTTPHIVTFILGINAAMEEENVLDENFEVGTIDSIKTSLMGPLAGLGDS FFWGTLRLIATGVGTSLALQGNVLGPILFLLIFNVPHVIVRYLLNRWGYKLGTGFLKKIQ ANGMMESLTLGASIIGLMVVGAMTASMIDLTIPITISGSGKNAVTVQNIFDDIMPKLLPL ASFGFVFYLLKKEVKPLAILGGMAIVGILGSLIGLF >gi|237663593|gb|GG668925.1| GENE 97 88143 - 88934 905 263 aa, chain - ## HITS:1 COG:STM4537 KEGG:ns NR:ns ## COG: STM4537 COG3715 # Protein_GI_number: 16767781 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 4 263 3 259 259 311 71.0 7e-85 MIGQAILLGCIAFIAQSEYALGTSLLSRPIVTGLFVGIVLGDVKTGVIMGATLELAFIGS FSVGASIPPDVVTGGILGTAFAITAGAGTETALVLGLPIATLTLILKNIYLGLLIPIMSQ KADQYAEEGAYKGVERMHLLAGFGLSFMLALIVTISFAVGSNTIKGLLDLIPEFIQHGLS VATGIIPALGFAMLARLLINKQVAPYFFLGFVLMAYFKLPVTGVAILGAITAVIVVNIMN YAKGKNETIQTTSGEVIDDDEDF >gi|237663593|gb|GG668925.1| GENE 98 88950 - 89420 591 156 aa, chain - ## HITS:1 COG:STM4536 KEGG:ns NR:ns ## COG: STM4536 COG3444 # Protein_GI_number: 16767780 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 149 1 149 153 205 71.0 3e-53 MIKLLRVDHRLLHGQVAFSWTQGLGADCILIANDDVPKNDIRKTTIKLAKPAGVKLVIKT IEDAIAALKSGVTEKYKLFIVVESVEDAYRLATAYPEIKEINLGGMKVRENTRNISKAIN ITPDEEKMVKELVANGCEVETRQVPNDKKVAALNVL >gi|237663593|gb|GG668925.1| GENE 99 89432 - 89851 526 139 aa, chain - ## HITS:1 COG:STM4535 KEGG:ns NR:ns ## COG: STM4535 COG2893 # Protein_GI_number: 16767779 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 128 1 128 140 95 36.0 3e-20 MERKIILATHGNFAAGIQTSLALICGETKNVECLCAYMEQPYDLAKTVKDILKNNQQNEL IVITDLFGGSVNNEFFNYVGKQAMHLISGLNLATLIEIYTQINTVDSLVDLVKRAVENGQ ESLCYCNELSSKEILEEEF >gi|237663593|gb|GG668925.1| GENE 100 89923 - 92694 2194 923 aa, chain - ## HITS:1 COG:STM4534_1 KEGG:ns NR:ns ## COG: STM4534_1 COG1221 # Protein_GI_number: 16767778 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 454 1 458 460 419 48.0 1e-116 MLKTQIVDYLRNQTAFFEPSLVSEIFTASNIATTFSIKRNTASHYLNQLNEEGILVKINT RPVYFFHKEAFQQQNYLLKRTVYQSFQEMIDEQPVFDRKSDFFQSVIGYRGSLAQTIEQL KMAALYPGGGLPVLITGESGTGKSFLASLYYQFCLSKELLDDSAPFVTVNCAQYANNPEL LTSQLFGHLKGAFTGADSDKIGAFQSAEGGVLFLDEVHRLSPEGQEKLFTFLDQGIIYRM GETNRPIPVTCRLCFATTEEISSTFLTTFLRRIPIQIKIPSLAERTQAERKQLIMRAFYE EQQAIQKAVTITPQVIQLLENHHYVGNVGELRNNIKIITARSFAANLDKCVIPITLHDLP KEFLDQSIKLVPDENELPIRLDEQTNLVSLLEETELAQRRIIQSYERILRLYVSHHHHLS TANNDISKEIERLFDDLLFEKKREKNHEMLLFITQNIRQLLETIESSYQIRFNGSLVYAL STYLFQRRCIDWFPEQEPTTVIDELLTEVQTKLATSYGYAEQLLTLVKRSLDIELSQMDR IIVTIYLHYSGSVKKSHYPKAVIVAHGYATASSIANVANRLLNVPIFQSFDMPLDVTPKK ISEHLIHYMERQETRNGLVILFDMGSLKEIYQYFPAEEEGPFLLMNNVTTSLALSIGEAI KDEVSFEELPQKALTVHPNEWEIILPENKTERVILTTCSTGIGTAVKIRDLLEKSLPAEA QLKIIPCEYNQLRNAESIKESFPEYEIVGIIGTNNPSSNDLPYISLEELIAGKGITTLLE WTKRELTKDMLSYVNHELIRNFSLDRVIQSVTILDTEKIIRQVEVFLIQLEERWQQTIQN DRKLAVYVHVSCLIERLIRNEPIENYNGAEQLKQCQRTVLQELKEAFSVIEKVYSVNIPE SELFYVYDVLFGKTEFNNAESDF >gi|237663593|gb|GG668925.1| GENE 101 93366 - 94052 548 228 aa, chain - ## HITS:1 COG:lin2806 KEGG:ns NR:ns ## COG: lin2806 COG0232 # Protein_GI_number: 16801867 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Listeria innocua # 1 226 222 461 465 116 32.0 3e-26 MFNAIKFATGTQNKRHPLVFLLEASDDIAYTFSDIEDAYNYGLYSYQDLKQFVDAQTGTK KFLMLEKDKTEEATLQEFLRKTQRAVCQSVAKNFANHYDLIMRGIYHNEIIIEDCDEVKC FQALKNFSRVYVFQTKTILDQEVLGFNIINRLLDEFVPVVLKYEKVSMNKYEERIFNNIS ESAKALYRREAKNATEAEKDYYRLKMAVDFVCNMTDGYAKKVYDTLFT >gi|237663593|gb|GG668925.1| GENE 102 94045 - 94728 616 227 aa, chain - ## HITS:1 COG:lin2806 KEGG:ns NR:ns ## COG: lin2806 COG0232 # Protein_GI_number: 16801867 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Listeria innocua # 3 220 1 216 465 160 40.0 2e-39 MKMNWRQLVGTYRISDNGKQYQNDWLNKQVDLATELRKSFDSDYRRVIKSDAFRRLQDKT QVFPLERNDFVRTRLTHSLEVAMHSRDILRLVISQLNERNIEVMELSECYRLLETAALIH DIGNPPFGHFGEEAIRIWFEKNGPLYACWSDFSEQQQNDFLNFEGNAQTIRLLTKLHHDN GTSKAGMKLTATTLDTVIKYTASSDQLNKQQLLSKKSWLFLLGKTSV >gi|237663593|gb|GG668925.1| GENE 103 94745 - 95569 629 274 aa, chain - ## HITS:1 COG:no KEGG:EF1959 NR:ns ## KEGG: EF1959 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 274 1 274 274 546 100.0 1e-154 MSNGKKIFISHSSKDQEYVDAFIQLLKKFGFRTQDIFYSSTIETGVQPGELIFDTIKREL TNQPVMLYFLSDHYYQSIPCLNEMGASWMLSDKHYPIALNNFSMKDMKGVISSERLAIAF NDKTSTNEINCLLKKLSHDTDVQAEPDFELNVEKNIQPFQNKLTQLIRQASYLKPDEKGY FETILSTHRPVYGTAKGVYDCFKLPSLIEPKSLGLDTLSEDESHWLFFFLTWGTFQEGEK VRFKLKKDKAYNNREFSDIGKCKNIYVSYLEKVE >gi|237663593|gb|GG668925.1| GENE 104 95922 - 97220 1672 432 aa, chain - ## HITS:1 COG:SP1128 KEGG:ns NR:ns ## COG: SP1128 COG0148 # Protein_GI_number: 15900994 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Streptococcus pneumoniae TIGR4 # 1 430 1 433 434 667 82.0 0 MSIITDIYAREVLDSRGNPTIEVEVYTESGAFGRGMVPSGASTGEYEAVELRDGDKARYL GKGVTKAVDNVNNIIAEAIIGYDVRDQMAIDKAMIDLDGTPNKGKLGANAILGVSIAVAR AAADYLEVPLYHYLGGFNTKVLPTPMMNIINGGSHADNSIDFQEFMIMPVGAPTFKEALR MGAEVFHALASILKGRGLATSVGDEGGFAPNLGSNEEGFEVIIEAIEKAGYVPGKDVVLA MDAASSEFYDKEKGVYVLADSGEGEKTTEEMIAFYEELVSKYPIISIEDGLDENDWDGFK KLTEVLGDKVQLVGDDLFVTNTTKLAEGIEKGIANSILIKVNQIGTLTETFEAIEMAKEA GYTAVVSHRSGETEDSTISDIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGDVAEY KGLKSFYNLKNK >gi|237663593|gb|GG668925.1| GENE 105 97352 - 98107 926 251 aa, chain - ## HITS:1 COG:L0006 KEGG:ns NR:ns ## COG: L0006 COG0149 # Protein_GI_number: 15673116 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Lactococcus lactis # 2 251 3 252 252 386 80.0 1e-107 MRKPIIAGNWKMNKTLSEAQSFAEAVKNAVPSNDVVDAVIGSPALFLAPLAWNLKDSEVK LAAQNCYWENAGAFTGENSPAAIADLGVDYVIIGHSERREYFHETDEDINKKAKAIFANG MTPIFCCGETLETYEAGKTAEWIEGQITKGLVGLSNEQVASMVIAYEPIWAIGTGKSADA NIADEICGVVRSTVEKLYGKEVSEAVRIQYGGSVKPENIAEYMAKENVDGALVGGASLEA DSFLALLDAVK >gi|237663593|gb|GG668925.1| GENE 106 98156 - 99349 1498 397 aa, chain - ## HITS:1 COG:lin2552 KEGG:ns NR:ns ## COG: lin2552 COG0126 # Protein_GI_number: 16801614 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Listeria innocua # 1 397 1 396 396 592 79.0 1e-169 MAKKTIKDVDLKDKKVLVRVDFNVPLKDGVITNDNRIVAALPTIKYVIENGGKAILFSHL GRVKTEEDKAGKSLKPVAERLSELLGQPVTFVPETRGKELEDAVNNMKDGDVLVFENTRF EDVDGKKESGNDAELGKYWASLGDVFVNDAFGTAHRAHASNVGIASTGIPTVAGFLMEKE IKFIGEAVENPKRPFVAILGGAKVSDKIAVIENLIEKADKILIGGGMAYTFMKAQGYSVG LSLLEEDKVDLAKSLMEKAGDKLVLPVDTVVSKEFSNDAPFHTVPSTEIPDDEEGLDIGE KTIELFANELQGAKTVVWNGPMGVFEMSNFAKGTIGVCEAIANLEDATTIIGGGDSAAAA IQLGYENKFSHISTGGGASLELLEGKTLPGLASINDK >gi|237663593|gb|GG668925.1| GENE 107 99476 - 100477 1277 333 aa, chain - ## HITS:1 COG:lin2553 KEGG:ns NR:ns ## COG: lin2553 COG0057 # Protein_GI_number: 16801615 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Listeria innocua # 1 333 1 334 336 549 83.0 1e-156 MTVKVGINGFGRIGRLAFRRIQDVEGIEVVAINDLTDAKMLAHLLKYDTTQGRFNGTVEV HEGSFNVNGKEIKVLANRNPEELPWGELGVDIVLECTGFFTSKEAAEKHLTAGAKRVVIS APGGNDVPTIVYNTNHETLTGEETVISGASCTTNCLAPMAKALHDNFGVVEGLMTTIHAY TGDQMTLDGPHPKGDFRRARAAAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVATG SLTELVTVLDKEVTVDEVNAVMEKAANESYGYNTDEIVSSDIVGMTYGSLFDATQTKVMT VGDKQLVKTVAWYDNEMSYTAQLVRTLEYFANL >gi|237663593|gb|GG668925.1| GENE 108 100517 - 101554 1045 345 aa, chain - ## HITS:1 COG:lin2554 KEGG:ns NR:ns ## COG: lin2554 COG2390 # Protein_GI_number: 16801616 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Listeria innocua # 13 342 13 342 348 325 50.0 8e-89 MLKEFKMIEAVAPDMLDVLQERFQILRNIYWMQPIGRRSLSETMGITERVLRTETDVLKQ LNLIEPSKSGMTLTERGLEVYQGLELVMNQLLGMHQIEKEMTQYFGIQRCIVVAGDSDIQ KKVLSDFGDVLTNTLNLLLPNGENTIAVMGGTTMAMVAENMGSLETEKRHNLFVPARGGI GEAVSVQANSISAVMANKTGGNYRALYVPEQLSRETYNSLLQEPSIQEVLTLISHANCVV HSIGRALHMAARRKMSDDEMVMLKQKNAVAESFGYFFDEEGKVVYKIPRIGLQLKNLQEI PYVVAIAGGKTKAKAIRAYMKNAPKQTWLITDEAAANEILKGVTL >gi|237663593|gb|GG668925.1| GENE 109 101974 - 102852 889 292 aa, chain - ## HITS:1 COG:SP2113 KEGG:ns NR:ns ## COG: SP2113 COG1284 # Protein_GI_number: 15901928 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 3 290 25 312 313 320 52.0 2e-87 MKKIYDGLPVHDYTTKFSVSIVYAILASIAMNFFYQPGNIYSSGLTGLAQILTTLSTKIV GFNVPVSITLYLLNVPLFFIAWKKIGKKFTIFTFITVTLTSLFMHIVPQTVMTQDPIICA IFGGAISGSGIGFVLKNGVSSGGLDILSITIRKKTGRSVGSISIYFNALIVFVAGYLFGW QYMFYSALSIFVSGKVTDAVYTKQKKMQVMIVTKNPDRVVDEIQKKMRRGITIIHEAEGA YRHDRQTVLLTIVTRFELPSLEAAMKESDPNAFVSISDNVKILGRFYEEDYK >gi|237663593|gb|GG668925.1| GENE 110 102995 - 103564 788 189 aa, chain - ## HITS:1 COG:SP0663 KEGG:ns NR:ns ## COG: SP0663 COG4475 # Protein_GI_number: 15900564 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 3 181 1 179 187 203 60.0 1e-52 MTIDEKMLKEQLVTITEEVTTAGNLKKGDLFVLGCTTSEVVGGVIGKNSSAEVGQWIVST LIEQLDKKGISLAVQGCEHINRALAMERRVAEEKGFEIVSVVPQLHAGGSCSVAAFEKFD EPVEVEHIVAQAGIDIGDTSIGMHVKHVQVPLRLSIRTLGAAHVTALYSRPKYIGGPRAH YETTQERNR >gi|237663593|gb|GG668925.1| GENE 111 103561 - 104067 603 168 aa, chain - ## HITS:1 COG:SP1597 KEGG:ns NR:ns ## COG: SP1597 COG4720 # Protein_GI_number: 15901437 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 2 154 6 152 153 105 43.0 5e-23 MTRKISLYAVITALTVAVSMVFIIPVPATNGFVTLADAGIYIASLLFGPIGGLTVGALSG GLIDLLSGYPQWFVFSLLIHGGQGWLAGHFFNKNKKMQTLGLLLASLLMISGYALATSWL YGVGAGIASLPGNIIQSLFGVIVALPLSQTLKRVLPKNGRLEERRMNK >gi|237663593|gb|GG668925.1| GENE 112 104051 - 104866 764 271 aa, chain - ## HITS:1 COG:L0202 KEGG:ns NR:ns ## COG: L0202 COG0351 # Protein_GI_number: 15672469 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Lactococcus lactis # 2 241 8 249 262 183 40.0 4e-46 MTKIILTIGGSDPFSGGGIQTDLKTFENHQVFGLSTLTCLATAPKNHFQIHDLETSLVKE QLASIPAGSLDGIKIGLIHSEESMLQIVTFLKKHAGLPVVLDPVLAFKETTSVYEKRYMQ LLIEKLFPFATIITPNLKEAELLIGRKLTTVEEVQQAAEELNSLGAATVVIKGGNRWLGQ EARDFFYDGQQHIQLVKEKVMAHTIDGAGCSFASAIGANLVKGYPLIEAVDLAKTYVHEA IVSGVQLNAAFGSVWHEGLLAGGVADNDKKN >gi|237663593|gb|GG668925.1| GENE 113 105041 - 106810 2211 589 aa, chain - ## HITS:1 COG:lin1554 KEGG:ns NR:ns ## COG: lin1554 COG0173 # Protein_GI_number: 16800622 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Listeria innocua # 1 583 1 584 591 806 67.0 0 MEKRTTYCGNVSAEFIEKEVVLKGWVQKRRDLGGVIFIDLRDREGIVQVVFNPEKSKEAW EIADKCRSEYVIEVKGQVVYRDKEAINPKMKTGEFEVMATDITILNTAKTTPFTIEDDNN VNDELRMKYRYLDLRRPSMTNNIKLRHQVTKTIRHYLDNHDFLDIETPYLGKSTPEGARD YLVPSRVHAGHFYALPQSPQLFKQLLMGAGFDRYYQIVRCFRDEDLRGDRQPEFTQIDIE TTFLTPEEIQTYTENMLAEVMKETKGIEISVPFPRMSYDEAMARYGSDKPDTRFAMELID VAEVVKDVDFKVFQAALENGGHVKALNAKGAADKYSRKDMDNLGKYVSQFGAKGLAWLKV EEDGLKGPIAKFLTEVSDELIAATNAEVGDILMFGADKPEIVAAALGAVRTRLGKELGLI DESKFNFLWIVDWPLFEYDEEAGRYVSAHHPFTQPKAEDVDRLATDPASVYAEAYDVVLN GYELGGGSLRIHTRELQEKMFETLGFTKEEAQDQFGFLLDALDYGFPPHGGIALGLDRLA MLLAGEENIREVIAFPKNGKAIDPMNNAPSLVSPLQLFELNIDVTAIDE >gi|237663593|gb|GG668925.1| GENE 114 106828 - 108129 1587 433 aa, chain - ## HITS:1 COG:SP2121 KEGG:ns NR:ns ## COG: SP2121 COG0124 # Protein_GI_number: 15901936 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 426 1 424 429 555 64.0 1e-158 MSYQKPKGTNDILPGTSEKWQFVEETARLIFKDYQYQEIRTPIFEHYEVISRSVGDTTDI VSKEMYDFYDKGDRHVTLRPEGTAPIVRAFVENKLYGPEYTKPYKTYYMGPMFRYERPQA GRLRQFHQIGVEAFGSENPALDVEIMAMALDFFKQLGIQQIKLVINSLGDKETRATYRQA LIDYLEPHMAELSEDSQRRLHENPLRVLDSKDKKDKVIVAEAPSILDYLNEPSKAHFEAV TDMLDLLEIPYEIDSNMVRGLDYYTHTIFEIMSEAPKMGAQSTICAGGRYNGLVEELGGP DTPGFGFGMGIERVLLTMEAEEVVIPALSELDAYVVGIGSDTNVAALQLVQSIRNFGFSA DRDYMNRKPKAQFKTADKLQAKLVLTIGENELNEGIVNVKSMATREEKAFPLSAIHDSFD EVYDEMMTKMIEE >gi|237663593|gb|GG668925.1| GENE 115 108487 - 108933 566 148 aa, chain - ## HITS:1 COG:SPy1980 KEGG:ns NR:ns ## COG: SPy1980 COG1490 # Protein_GI_number: 15675771 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Streptococcus pyogenes M1 GAS # 1 146 1 145 147 175 60.0 3e-44 MKVVIQRVSQAQVAIEEQIVGQIKQGFMVLVGIHQEDTPEDVAYVVGKISKLRVFEDDEG KMNRSIQEIEGSILSISQFTLYAKTKKGNRPSFIEAARPDVAIPLYELFNQQLEAEGIAV ATGEFGADMQVSLTNDGPVTIVIDTREK >gi|237663593|gb|GG668925.1| GENE 116 108957 - 111170 2542 737 aa, chain - ## HITS:1 COG:lin1558 KEGG:ns NR:ns ## COG: lin1558 COG0317 # Protein_GI_number: 16800626 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Listeria innocua # 1 734 1 735 738 981 66.0 0 MPKEEILTGPAVIKIVSTYMGPEHVELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGI LAELHMDPHTVATGFLHDVVEDTDVTLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQL AENHRKMLLAMAQDLRVIMVKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGI SRIKWELEDTALRYINPNQYYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEIYAEIYG RPKHIYSIYRKMKDQKKQFNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYI AMPKANMYQSIHTTVIGPKGNPVEVQIRTHEMHQIAEFGVAAHWAYKEGKAEKIETDELT KQVDWFHEIIELQDESYDASEFMQGVKEDIFSDKVYVFTPSGDVTELPKGSGPLDFAYSI HTEIGNKTTGAKVNGKMVQLDYVLKNGDIIEVLTSPNSFGPSRDWLKMVKTSKAKNKIKR FFKEQDREDNIIKGHDAVIKYMTEIGFTPKEFLTKNKMAEVLDKFKFQTEDDLFAAVGYG EVSAQVVCNRLTEKERREQELERQRQEAEELLNQPAKKESEKMKVRHEGGIVIQGVDNLL IRLSRCCNPVPGDEIVGYITKGRGVSIHRADCPNVQHQEELAQRLIEVEWEDTEHSRKEY AADLEIYGYDRSGLLSDVLQVISSMTKNLVGVEARPSKDKMAQIHVTVKIQNLSHLKTIV DKIKSVPDVYSVRRTNG >gi|237663593|gb|GG668925.1| GENE 117 111385 - 112137 737 250 aa, chain - ## HITS:1 COG:lin1507 KEGG:ns NR:ns ## COG: lin1507 COG1385 # Protein_GI_number: 16800575 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 248 1 249 255 233 49.0 2e-61 MQRYFMKEDYQEKDLYKVADENYHHIVRVMRMTPNDRCYLVFQNKTAILAEIVEIDSTSV YFKEISKEEMDKELPIEVTIACGLPKGDKLEWIVQKGTELGGNQFIGFPAKTSVVKWDHK KRAAKEKRLQKIATEAAEQSHRQQTPSVSLVEKTQEIIAQFDSYDTVLVAYEESAKQGEK SQLAQVLSTCQPGARLCVLFGPEGGFAPQEIEQFLQAGAKLCGLGPRILRAETAPLYLLS VVSYQMELLN >gi|237663593|gb|GG668925.1| GENE 118 112139 - 113086 1600 315 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227519318|ref|ZP_03949367.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis TX0104] # 1 315 1 315 315 620 100 1e-177 MKWTEVKVETASEAVEAISNIMMEAGASGVAIEDALDIENFESDLYGEILDKEQFTHIKE GAIVMAYFPETTFLPEILPFMKENILRLPEYGLSIGKNEMTISEVAESDWATAWKKYYHP VRVTRFLTIVPSWEAYHAQDEAEKIITLDPGMAFGTGTHPTTRLTLQALETVLRGGETVL DVGTGSGVLSIASRYLGAKDVYAYDLDEVAVAAAKENMDLNPIAADVHVSANDLLKGIDH SADVIVANILADIIVLMIEDAWRLLKQDGTFIISGIIEDKKAMVLEALTKVGFVVDQLFN QGDWYAIILKKPEEE >gi|237663593|gb|GG668925.1| GENE 119 113102 - 113587 706 161 aa, chain - ## HITS:1 COG:no KEGG:EF1977 NR:ns ## KEGG: EF1977 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 161 1 161 161 282 100.0 3e-75 MKKATMLTYLEEQLEKHLGDYEVGLDWDRKNHTIEVIVRLYAENNEQVAIDDVDGTLSEE EFIEFEDGLLFYNPQKSVVDDEEYLVTIPYEGKKGLRKAVLDGFIHYLKVVLDEGQSDLL DFLSDETAEVFELHWEPADFEAMIKKVAETEKEQWIAYPSY >gi|237663593|gb|GG668925.1| GENE 120 113544 - 114221 809 225 aa, chain - ## HITS:1 COG:SA2134 KEGG:ns NR:ns ## COG: SA2134 COG2094 # Protein_GI_number: 15927924 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase # Organism: Staphylococcus aureus N315 # 8 198 3 192 202 186 46.0 2e-47 MKETINIFNTKTTEEVAQYLLGMYLEHETATGVLGGYIVDAEAYLGPDDEAAHSFGLRKT PRLQAMYDKPGTIYLYTMHTHLILNMVTQEQGKPQGVMIRAIEPVEGVDKMIENRQGRQG VELTNGPGKLVAALGIDKQLYGQSIFSSSLRLVPEKRKFPKKIEALPRIGIPNKGRWTEL PLRYVVAGNPYISKQKRTAVDQIDFGWKDEENEKSNNAHILRGTT >gi|237663593|gb|GG668925.1| GENE 121 114350 - 115627 1466 425 aa, chain + ## HITS:1 COG:lin1549 KEGG:ns NR:ns ## COG: lin1549 COG2256 # Protein_GI_number: 16800617 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Listeria innocua # 3 425 4 426 427 595 69.0 1e-170 MQQPLAYRMRPRHLDEVVGQQHLVGPGKIIRRMVEAKMLSSMILYGPPGTGKTSIASAIA GSTNYAFRMLNAATDTKKDLQIVAEEAKMSGTVILLLDEIHRLDKTKQDFLLPHLENGRI IMIGATTENPYITINPAIRSRTQIFEVKPLTETDIQQAIQEALTDSTRGLGDYPVHLEEK ALQHLTRATNGDLRSALNGLELAVKSTPKNEQGEIKITLPIIEECVQRKALTHDKDGDAH YDVISAFQKSIRGSDVDAALHYLGRLVEAGDLPIICRRLMVIAYEDIGLGNPAAAARTVT AVQAAEKLGFPEARIPLASVVIDLCLSPKSNSAVTAIDAALADIRQGSVGDVPDHLRDAH YAGAKELNRGIGYQYPHNFENGWVNQQYLPDKLKEARYYEPIDIGKYEQALHQQLKRIQE WKQKK >gi|237663593|gb|GG668925.1| GENE 122 115711 - 115914 75 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYALSFHCVDRTFLLISRDPACIKVGNMPFLLVVQYCDRGTHLLILRVQYSRTITGIDGF YHFYEDF >gi|237663593|gb|GG668925.1| GENE 123 115955 - 116233 291 92 aa, chain + ## HITS:1 COG:no KEGG:EF1980 NR:ns ## KEGG: EF1980 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 92 19 110 110 114 100.0 2e-24 MIRILVLLLAVVTGVASYYLMKKSAAFLPLLKKETATESQQFIERFGRYYLIIAILGVLA AIFNRPLLSIGFIFFVLLLSTLFSLTFAKKMS >gi|237663593|gb|GG668925.1| GENE 124 116595 - 117068 673 157 aa, chain + ## HITS:1 COG:lin1615 KEGG:ns NR:ns ## COG: lin1615 COG0589 # Protein_GI_number: 16800683 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Listeria innocua # 1 147 1 147 152 161 57.0 4e-40 MLQQYQKIMIAIDGSDEADLAFKKAVNVAKRNDAELLLAHVVDTRSFQSVSSFDGALAEE AMSMAKETLDTYQQQAVDMGQTKVSSVLAYGSPKNIIAKELPKEYNIDLIMLGATGLNAV ERLFIGSVSESVIRNASCDVLVVRTDLDNKLPKNEEK >gi|237663593|gb|GG668925.1| GENE 125 117180 - 118367 1489 395 aa, chain - ## HITS:1 COG:SPy0109 KEGG:ns NR:ns ## COG: SPy0109 COG0282 # Protein_GI_number: 15674332 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Streptococcus pyogenes M1 GAS # 1 395 1 395 398 507 65.0 1e-143 MSKTIAINAGSSSLKWQLYQMPNEEVIAKGIVERIGLKDSIFTIKYGEGQKYEVIVDIDN HEVAVKMLLDQLIDLNILGSYDEITGVGHRVVAGGEEFKDSVVITDEVLEKIEALSELAP LHNPANAMGIKAFKHILPEIISVAVFDTSFHTTMPEHNYLYSVPREYYEKFAARKYGAHG TSHRYVSQRAAEMLGRPIEDLKIITCHLGNGASITAVDGGKSVDTSMGFTPLAGVTMGTR SGDVDASLLPYLMTKLGLTDVQDMVDILNKKSGLLGLTNGLSSDMRDIQSNLDKPEVQTA YNIFIDRIRKYIGSYVTVMNGVDAIVFTAGIGENAVGVRKDIIDGMTWFGCEIDDDKNNV HGEEAVISTDDSKIKLLLVPTDEELMIARDVERLK >gi|237663593|gb|GG668925.1| GENE 126 118392 - 119363 1049 323 aa, chain - ## HITS:1 COG:lin1617 KEGG:ns NR:ns ## COG: lin1617 COG0827 # Protein_GI_number: 16800685 # Func_class: L Replication, recombination and repair # Function: Adenine-specific DNA methylase # Organism: Listeria innocua # 7 317 19 327 332 240 43.0 3e-63 MEQAIQLLQQSLDTSFLDAYIENGENILDDFQVRVLDGVPNPETVKQLETLYHTIKKIDL APEDVRRLSQLLLLKGTRKEQLQANHQLTPDGIGFLFVYLVEQLTNKSEPLKILDPASGM GNLLLTVLLNLETAGYKVSGYGVDIDETLLAVSSVNNAWSQANIQLFHQDGLQDLLLDPV DLALSDLPIGYYPNDERAKGFAAAAEEGHSYAHHLLMEQAMKYVKPAGFGLFLIPTNILE TEQSEFFKNWLTKNVYLQGMIQLPDELFKSEQSRKSILLVQNKGADAEQVKEVLLAKLAS LKDINKVTEFFKQFEAWKASNLK >gi|237663593|gb|GG668925.1| GENE 127 119528 - 119881 246 117 aa, chain - ## HITS:1 COG:no KEGG:EF1985 NR:ns ## KEGG: EF1985 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 117 1 117 117 169 100.0 4e-41 MRQKYSGNLLFTAMAIVYLMSFLALQLLEERQLTQKFTQATQEYYAGKSIFHLFLADVKQ NRRKLKTEERLVYAQVTLDYTYKNEQLRITVLLNKSGRKYQYQERVSHQKKAETILE >gi|237663593|gb|GG668925.1| GENE 128 119881 - 120315 356 144 aa, chain - ## HITS:1 COG:lin1379 KEGG:ns NR:ns ## COG: lin1379 COG4940 # Protein_GI_number: 16800447 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Competence protein ComGF # Organism: Listeria innocua # 4 140 14 148 154 61 28.0 7e-10 MVNKKYAGFTMLECLVALVVLSCMCQLFQLMIQQSFIGNQYLKNNDSKSWHIFLIQLEKE CQKLVFQTGSAQEISFLDSETNKTISIQIKEDKIIKRVNGKGYQPLLIGIKNGQFKNEGQ SFTLEVTFTSGKTFDSFFPIKGEF >gi|237663593|gb|GG668925.1| GENE 129 120305 - 120655 122 116 aa, chain - ## HITS:1 COG:no KEGG:EF1987 NR:ns ## KEGG: EF1987 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 116 40 155 155 207 99.0 1e-52 MLWNFRWGVANIRRKLTIYSGFILLESLVSFSIVCVIAGIFSLTITQLIQQNYQREQELT RTRLGYEAILFLEQTGDLRFKERIYQGETYRFSLMENDGRRILKVTDSRGAILIGQ >gi|237663593|gb|GG668925.1| GENE 130 121010 - 121135 161 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKIIKHFMKPVEVFETLDDDIGMFLIISICTALIFTFFSK >gi|237663593|gb|GG668925.1| GENE 131 121432 - 122373 464 313 aa, chain - ## HITS:1 COG:STM0489 KEGG:ns NR:ns ## COG: STM0489 COG0276 # Protein_GI_number: 16763869 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Salmonella typhimurium LT2 # 3 302 5 307 320 274 43.0 2e-73 MKRTGILLVNLGTPKDSSKTEVRKYLKTFLSDRRVIKIHPIIWKPILNGIILNIRPKKSA KLYQKICTENGFPLLEYTEKQMENLKNICPEVEVTIGMSYSEPSIETALDTLLSKEIEEL NVIPMYPQYSGTTVGSVFDSVMNYFIKSDRIVDIKFIRSFYNNPQYIDYFSKKINEALNE SPIDAIVFSYHGIPMSYVKDGDNYPKECTKTTKLIMDKLGDIRYYQTYQSKFGPSEWLKP ATDDTLKKLPSKGIKNILIVAPGFVVDCLETIEELEHENRNYFLENGGEVYKYVHPFNGD IEFAKLVKDIISL >gi|237663593|gb|GG668925.1| GENE 132 123113 - 123334 162 73 aa, chain - ## HITS:1 COG:no KEGG:EF1990 NR:ns ## KEGG: EF1990 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 73 1 73 73 117 100.0 1e-25 MGFGKWKEIIPSDKSKQFEEGQKVSFIYRKEIRSGIIAVLLINSAVINIIDSSKPKNKKE KTVISYEKLLSMY >gi|237663593|gb|GG668925.1| GENE 133 123433 - 123633 333 66 aa, chain - ## HITS:1 COG:L117090 KEGG:ns NR:ns ## COG: L117090 COG1278 # Protein_GI_number: 15672511 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Lactococcus lactis # 1 66 1 66 66 95 80.0 2e-20 MNNGTVKWFNSDKGFGFITGEDGNDVFAHFSAIQADGFKSLEEGQAVTFDIEEGQRGMQA VNIFKA >gi|237663593|gb|GG668925.1| GENE 134 124470 - 124634 116 54 aa, chain - ## HITS:1 COG:no KEGG:EF1992 NR:ns ## KEGG: EF1992 # Name: not_defined # Def: endolysin # Organism: E.faecalis # Pathway: not_defined # 1 54 360 413 413 94 98.0 1e-18 MKVNGSVVSNIYTVQYGDNLSSIAAKLGTTYQTLAALNGLANPNLIYSGQTLSY >gi|237663593|gb|GG668925.1| GENE 135 124784 - 125710 1074 308 aa, chain - ## HITS:1 COG:SPy1006 KEGG:ns NR:ns ## COG: SPy1006 COG3757 # Protein_GI_number: 15675010 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Streptococcus pyogenes M1 GAS # 97 213 219 342 444 81 38.0 2e-15 MKKKLLATLLVVLFFVSPISTFAAKGDQGVDLSIWNGYQATFGYAHDKFSISQIGGQNNY GIYDQVTYSSQVASTIAQGKRAHTYVWWQNVLTYENAKQVLDYFLPKVQTPKGSIVALDA EDGVQSTDVTLWALDYIKEAGYTPMLYGYKGYLTSSYDLSRIAKKYQLWMAEYPDYEVTP YPNYNYFPSFENIGIFQFTSTYVAGGLDGNVDLTGITDNGYTKNNQPATNTPAIEEGKEV ENTPSSDVKVGDTVKVKFSVDAWATGEAIPQWVKGNSYKVQEVTESRVLLEGILSWISKG NIELLLAS >gi|237663593|gb|GG668925.1| GENE 136 125711 - 125944 331 77 aa, chain - ## HITS:1 COG:lin1702 KEGG:ns NR:ns ## COG: lin1702 COG5546 # Protein_GI_number: 16800770 # Func_class: S Function unknown # Function: Small integral membrane protein # Organism: Listeria innocua # 2 72 3 73 86 65 50.0 3e-11 MINWKSRIKNKQFWLSIIPAVLLLIQVVAVPFGYKFQIEMINKQLLDVVNALFVVLTILG IVTDPTTPGLSDRKGDK >gi|237663593|gb|GG668925.1| GENE 137 125937 - 126158 251 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227555456|ref|ZP_03985503.1| ## NR: gi|227555456|ref|ZP_03985503.1| hypothetical protein HMPREF0346_2619 [Enterococcus faecalis HH22] hypothetical protein HMPREF0349_0641 [Enterococcus faecalis TX1322] predicted protein [Enterococcus faecalis ATCC 4200] predicted protein [Enterococcus faecalis T8] predicted protein [Enterococcus faecalis HIP11704] predicted protein [Enterococcus faecalis CH188] conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] hypothetical protein HMPREF9514_01578 [Enterococcus faecalis TX0855] hypothetical protein HMPREF9509_02966 [Enterococcus faecalis TX0411] hypothetical protein HMPREF9512_00550 [Enterococcus faecalis TX0635] hypothetical protein HMPREF0346_2619 [Enterococcus faecalis HH22] hypothetical protein HMPREF0349_0641 [Enterococcus faecalis TX1322] predicted protein [Enterococcus faecalis ATCC 4200] predicted protein [Enterococcus faecalis T8] predicted protein [Enterococcus faecalis HIP11704] predicted protein [Enterococcus faecalis CH188] hypothetical protein [Enterococcus sp. 7L76] conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] hypothetical protein HMPREF9509_02966 [Enterococcus faecalis TX0411] hypothetical protein HMPREF9514_01578 [Enterococcus faecalis TX0855] hypothetical protein HMPREF9512_00550 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9496_02185 [Enterococcus faecalis TX4000] hypothetical protein HMPREF9497_01885 [Enterococcus faecalis TX4244] hypothetical protein HMPREF9517_01930 [Enterococcus faecalis TX1341] hypothetical protein HMPREF9507_01844 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9511_03115 [Enterococcus faecalis TX0630] hypothetical protein HMPREF9506_01249 [Enterococcus faecalis TX0309A] hypothetical protein EF62_2356 [Enterococcus faecalis 62] conserved domain protein [Enterococcus faecalis TX1467] # 1 73 1 73 73 133 100.0 5e-30 MNLTVEQWLAVITFLGGIIFALMKFYHVFSQLEDSMKELKEAVERLNNHEIRISRLEEQN KTLFRGIGGNKND >gi|237663593|gb|GG668925.1| GENE 138 126193 - 126348 218 51 aa, chain - ## HITS:1 COG:no KEGG:EF1994 NR:ns ## KEGG: EF1994 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 51 1 51 51 97 100.0 2e-19 MKTNAFPGFDNIKQLYDWNCYTKQDLVDYVNMNCLTKEEYTKICGEPFSES >gi|237663593|gb|GG668925.1| GENE 139 126350 - 126670 401 106 aa, chain - ## HITS:1 COG:no KEGG:EF1995 NR:ns ## KEGG: EF1995 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 106 1 106 106 140 100.0 2e-32 MKIWIDDIQGYLDGYSTMEQPNKIELEVEKEPTDFFNYRWDGTSLIYDPDNVPEPEPTPP TELELLQKQNAELMKQVSQQNQVIQQTQRMTGELMKQVAELTKGAE >gi|237663593|gb|GG668925.1| GENE 140 126684 - 127175 589 163 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227519338|ref|ZP_03949387.1| ## NR: gi|227519338|ref|ZP_03949387.1| hypothetical protein HMPREF0348_2321 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_2616 [Enterococcus faecalis HH22] hypothetical protein HMPREF0349_0638 [Enterococcus faecalis TX1322] predicted protein [Enterococcus faecalis ATCC 4200] predicted protein [Enterococcus faecalis HIP11704] conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] hypothetical protein HMPREF9514_01575 [Enterococcus faecalis TX0855] hypothetical protein HMPREF9509_02963 [Enterococcus faecalis TX0411] hypothetical protein HMPREF0348_2321 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_2616 [Enterococcus faecalis HH22] hypothetical protein HMPREF0349_0638 [Enterococcus faecalis TX1322] predicted protein [Enterococcus faecalis ATCC 4200] predicted protein [Enterococcus faecalis HIP11704] conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] hypothetical protein HMPREF9509_02963 [Enterococcus faecalis TX0411] hypothetical protein HMPREF9514_01575 [Enterococcus faecalis TX0855] hypothetical protein HMPREF9496_02188 [Enterococcus faecalis TX4000] hypothetical protein HMPREF9517_01927 [Enterococcus faecalis TX1341] hypothetical protein HMPREF9507_01841 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9511_03118 [Enterococcus faecalis TX0630] hypothetical protein HMPREF9506_01252 [Enterococcus faecalis TX0309A] hypothetical protein EF62_2359 [Enterococcus faecalis 62] # 1 163 1 163 163 316 100.0 3e-85 MTTDIVQLKEKGKPVYLKTHTAAIDGLESYIKKIDADKAYQKITKKEPLWTGAWYGGAAG NGQVPSKSLSQCENGWILQWQEYTKEGALNGACYHFFLVPKQHAQNPGSGGVIFLLHGYY TNLVRKYLYIKDTKITGNDLNASSSDTAGSGSKMFALSAIYEY >gi|237663593|gb|GG668925.1| GENE 141 127175 - 127462 449 95 aa, chain - ## HITS:1 COG:no KEGG:MPTP_1473 NR:ns ## KEGG: MPTP_1473 # Name: not_defined # Def: hypothetical protein # Organism: M.plutonius # Pathway: not_defined # 1 95 1 80 80 85 54.0 9e-16 MTDIVKVKQGGTQVFPQTHWNAVEGKPEVLKGEKGDPGPQGPKGDKGDVGPQGPAGQNAT TTDVATSIKNGLMSKEDKTKLDGLPAITFEKVGEV >gi|237663593|gb|GG668925.1| GENE 142 127459 - 128055 777 198 aa, chain - ## HITS:1 COG:no KEGG:MPTP_1474 NR:ns ## KEGG: MPTP_1474 # Name: not_defined # Def: hypothetical protein # Organism: M.plutonius # Pathway: not_defined # 1 197 1 205 205 202 59.0 7e-51 MVKAKRMMETDENGVERQFYPITHASAVRGLEKIIAGQSKVLSVNGYTGAVIITKADLGL ENALTELPYATEETDGIITAEMFQRLSNGEGGVYILPIATADELGGIKVGQLLEITEDGT LSAVKQTDQNFTTELKSKLEELKGYTAGANISISEDGVISATGGGDGGGVNQQYVDQKVQ EAIDRIPDITFERVGEVE >gi|237663593|gb|GG668925.1| GENE 143 128048 - 128374 423 108 aa, chain - ## HITS:1 COG:no KEGG:EF2810 NR:ns ## KEGG: EF2810 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 103 197 299 302 154 70.0 1e-36 IDPGGTMLAELMDARVDIQGVRHNSISERLLADMEYLYQKLEKRLYTLEYGEISDLIILQ DDAFSLNHETEIVGTVDYPAIDGALVIATVDDTKQNAYVFEKVGEISG Prediction of potential genes in microbial genomes Time: Tue Jul 5 12:56:00 2011 Seq name: gi|237663592|gb|GG668926.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD5, whole genome shotgun sequence Length of sequence - 291770 bp Number of predicted genes - 279, with homology - 266 Number of transcription units - 142, operones - 76 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 85 - 158 86.8 # Pro TGG 0 0 - Term 157 - 189 4.2 1 1 Tu 1 . - CDS 204 - 1052 729 ## COG1737 Transcriptional regulators - Prom 1082 - 1141 6.8 + Prom 931 - 990 6.5 2 2 Op 1 . + CDS 1207 - 2514 1474 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 3 2 Op 2 . + CDS 2534 - 3721 1111 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases + Prom 4033 - 4092 7.4 4 3 Op 1 3/0.034 + CDS 4130 - 4597 358 ## PROTEIN SUPPORTED gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 5 3 Op 2 . + CDS 4600 - 7095 2492 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 7186 - 7240 19.0 + Prom 7188 - 7247 4.8 6 4 Tu 1 . + CDS 7313 - 8347 841 ## COG1289 Predicted membrane protein + Term 8383 - 8431 6.2 + Prom 8426 - 8485 3.3 7 5 Op 1 13/0.000 + CDS 8528 - 9448 1335 ## COG0826 Collagenase and related proteases 8 5 Op 2 . + CDS 9476 - 10723 1358 ## COG0826 Collagenase and related proteases 9 5 Op 3 1/0.241 + CDS 10747 - 12309 1507 ## COG2508 Regulator of polyketide synthase expression + Term 12425 - 12491 30.0 + Prom 12333 - 12392 80.3 10 6 Op 1 2/0.172 + CDS 12593 - 13861 1490 ## COG1457 Purine-cytosine permease and related proteins 11 6 Op 2 5/0.000 + CDS 13881 - 14975 1302 ## COG3535 Uncharacterized conserved protein 12 6 Op 3 . + CDS 14976 - 16529 1973 ## COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit + Term 16536 - 16575 4.3 13 7 Op 1 . + CDS 16603 - 17001 555 ## EF3271 hypothetical protein 14 7 Op 2 . + CDS 17088 - 18437 465 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 18460 - 18493 5.4 + Prom 18487 - 18546 5.4 15 8 Op 1 17/0.000 + CDS 18636 - 18998 436 ## COG1539 Dihydroneopterin aldolase 16 8 Op 2 2/0.172 + CDS 18999 - 19484 552 ## COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 17 8 Op 3 . + CDS 19487 - 20047 648 ## COG0302 GTP cyclohydrolase I 18 8 Op 4 . + CDS 20051 - 20644 206 ## PROTEIN SUPPORTED gi|162456259|ref|YP_001618626.1| putative ribosomal protein 19 8 Op 5 . + CDS 20637 - 21428 966 ## COG0294 Dihydropteroate synthase and related enzymes + Term 21444 - 21498 19.0 20 9 Tu 1 . + CDS 21851 - 23929 1486 ## PEPE_0977 hypothetical protein + Term 23953 - 23998 3.1 + Prom 23966 - 24025 5.3 21 10 Tu 1 . + CDS 24157 - 24240 62 ## + Term 24242 - 24284 4.3 + Prom 24342 - 24401 4.1 22 11 Tu 1 . + CDS 24433 - 24633 205 ## gi|227517151|ref|ZP_03947200.1| hypothetical protein HMPREF0348_0134 + Term 24664 - 24700 4.9 + Prom 24999 - 25058 13.2 23 12 Op 1 . + CDS 25165 - 26970 1913 ## FMG_1202 hypothetical protein + Prom 26974 - 27033 4.5 24 12 Op 2 . + CDS 27058 - 27402 573 ## gi|227517153|ref|ZP_03947202.1| hypothetical protein HMPREF0348_0136 + Term 27408 - 27449 11.3 - Term 27387 - 27446 18.2 25 13 Op 1 2/0.172 - CDS 27464 - 28450 1024 ## COG0142 Geranylgeranyl pyrophosphate synthase 26 13 Op 2 3/0.034 - CDS 28488 - 29045 531 ## COG4769 Predicted membrane protein 27 13 Op 3 1/0.241 - CDS 29057 - 29479 529 ## COG5341 Uncharacterized protein conserved in bacteria - Prom 29563 - 29622 6.8 - Term 29569 - 29620 12.2 28 14 Tu 1 . - CDS 29695 - 31641 2098 ## COG1252 NADH dehydrogenase, FAD-containing subunit - Prom 31798 - 31857 6.3 + Prom 31805 - 31864 6.3 29 15 Tu 1 . + CDS 31919 - 32848 1138 ## COG4939 Major membrane immunogen, membrane-anchored lipoprotein + Term 32912 - 32965 13.5 + Prom 33002 - 33061 6.2 30 16 Op 1 1/0.241 + CDS 33103 - 34170 1211 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 31 16 Op 2 . + CDS 34184 - 35131 664 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase + Term 35207 - 35257 10.0 + Prom 35321 - 35380 8.5 32 17 Op 1 . + CDS 35517 - 35879 323 ## EF3076 cell wall surface anchor family protein 33 17 Op 2 . + CDS 35866 - 38868 2536 ## EF3075 hypothetical protein + Term 38877 - 38922 5.4 - Term 38555 - 38607 -0.9 34 18 Op 1 . - CDS 38820 - 39092 87 ## 35 18 Op 2 . - CDS 39116 - 40732 1595 ## COG1316 Transcriptional regulator - Prom 40752 - 40811 2.0 + Prom 40939 - 40998 2.9 36 19 Op 1 . + CDS 41034 - 41168 58 ## 37 19 Op 2 . + CDS 41194 - 42489 1231 ## COG1106 Predicted ATPases 38 19 Op 3 . + CDS 42498 - 42938 174 ## EF3241 abortive phage resistance protein, putative + Term 43099 - 43157 19.0 - Term 43087 - 43144 13.0 39 20 Tu 1 . - CDS 43164 - 44156 963 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase - Prom 44176 - 44235 5.4 + Prom 44216 - 44275 3.6 40 21 Tu 1 . + CDS 44295 - 44510 280 ## COG3478 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain + Term 44518 - 44551 3.1 - Term 44596 - 44640 2.0 41 22 Tu 1 . - CDS 44751 - 44963 62 ## - Prom 45077 - 45136 7.4 + Prom 44812 - 44871 9.8 42 23 Op 1 58/0.000 + CDS 44931 - 48545 849 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 43 23 Op 2 . + CDS 48712 - 52365 4023 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 52370 - 52422 12.1 - Term 52363 - 52401 4.2 44 24 Tu 1 . - CDS 52414 - 53106 354 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases - Prom 53176 - 53235 7.3 + Prom 53135 - 53194 6.6 45 25 Op 1 . + CDS 53215 - 54735 1380 ## COG1070 Sugar (pentulose and hexulose) kinases 46 25 Op 2 . + CDS 54819 - 55538 607 ## EF3234 putative lipoprotein + Prom 55555 - 55614 5.9 47 26 Tu 1 . + CDS 55666 - 56133 557 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) + Term 56152 - 56187 4.0 + Prom 56162 - 56221 4.3 48 27 Op 1 59/0.000 + CDS 56253 - 56798 930 ## PROTEIN SUPPORTED gi|227517177|ref|ZP_03947226.1| ribosomal protein L13 49 27 Op 2 . + CDS 56812 - 57204 653 ## PROTEIN SUPPORTED gi|29377675|ref|NP_816829.1| 30S ribosomal protein S9 + Term 57292 - 57324 4.0 + Prom 57763 - 57822 10.1 50 28 Tu 1 . + CDS 57870 - 58355 410 ## gi|227517179|ref|ZP_03947228.1| hypothetical protein HMPREF0348_0162 + Prom 58364 - 58423 5.2 51 29 Op 1 . + CDS 58546 - 58971 124 ## gi|227517180|ref|ZP_03947229.1| hypothetical protein HMPREF0348_0163 52 29 Op 2 . + CDS 58987 - 59904 407 ## CLD_2076 hypothetical protein 53 30 Tu 1 . - CDS 60244 - 60408 96 ## gi|227517182|ref|ZP_03947231.1| hypothetical protein HMPREF0348_0165 - Prom 60504 - 60563 10.9 + Prom 60454 - 60513 7.8 54 31 Op 1 3/0.034 + CDS 60653 - 61069 414 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 55 31 Op 2 . + CDS 61062 - 63947 2596 ## COG1061 DNA or RNA helicases of superfamily II + Term 64073 - 64110 -0.7 + Prom 64155 - 64214 4.7 56 32 Op 1 45/0.000 + CDS 64246 - 65181 962 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 57 32 Op 2 . + CDS 65174 - 65944 772 ## COG0842 ABC-type multidrug transport system, permease component + Prom 66003 - 66062 7.6 58 32 Op 3 . + CDS 66133 - 67107 1141 ## COG0042 tRNA-dihydrouridine synthase + Term 67356 - 67422 30.0 59 33 Op 1 . - CDS 67428 - 68963 1344 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 60 33 Op 2 . - CDS 68984 - 69106 181 ## 61 33 Op 3 . - CDS 69141 - 70115 1056 ## COG0523 Putative GTPases (G3E family) 62 33 Op 4 . - CDS 70131 - 70280 247 ## PROTEIN SUPPORTED gi|29377651|ref|NP_816805.1| 50S ribosomal protein L33 - Prom 70313 - 70372 2.5 - Term 70318 - 70347 0.4 63 34 Tu 1 . - CDS 70391 - 70660 457 ## PROTEIN SUPPORTED gi|29377650|ref|NP_816804.1| 30S ribosomal protein S14 - Prom 70835 - 70894 5.3 + Prom 70739 - 70798 4.9 64 35 Tu 1 . + CDS 70867 - 71259 378 ## COG1765 Predicted redox protein, regulator of disulfide bond formation + Term 71396 - 71465 5.0 + Prom 71513 - 71572 6.9 65 36 Op 1 32/0.000 + CDS 71622 - 72344 367 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 66 36 Op 2 22/0.000 + CDS 72341 - 73012 731 ## COG2011 ABC-type metal ion transport system, permease component 67 36 Op 3 . + CDS 73025 - 73843 1139 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 73850 - 73901 9.2 + Prom 73856 - 73915 7.9 68 37 Op 1 9/0.000 + CDS 73935 - 75704 1721 ## COG3275 Putative regulator of cell autolysis 69 37 Op 2 2/0.172 + CDS 75685 - 76413 705 ## COG3279 Response regulator of the LytR/AlgR family + Term 76418 - 76466 13.4 + Prom 76475 - 76534 8.0 70 38 Op 1 23/0.000 + CDS 76565 - 76984 480 ## COG1380 Putative effector of murein hydrolase LrgA 71 38 Op 2 . + CDS 76981 - 77664 1018 ## COG1346 Putative effector of murein hydrolase + Term 77668 - 77694 -1.0 - Term 77773 - 77811 7.1 72 39 Tu 1 . - CDS 77876 - 78421 633 ## COG1335 Amidases related to nicotinamidase - Prom 78450 - 78509 7.8 + Prom 78504 - 78563 5.9 73 40 Tu 1 . + CDS 78587 - 79600 916 ## COG0657 Esterase/lipase + Term 79602 - 79645 12.6 + Prom 79847 - 79906 9.8 74 41 Op 1 . + CDS 79977 - 82499 2229 ## EF3188 hypothetical protein 75 41 Op 2 . + CDS 82532 - 84826 2678 ## EF3188 hypothetical protein 76 41 Op 3 . + CDS 84846 - 85235 186 ## EF3187 cell wall surface anchor family protein 77 41 Op 4 . + CDS 85192 - 85926 1037 ## EF3186 hypothetical protein 78 41 Op 5 . + CDS 85931 - 86731 992 ## EF3185 hypothetical protein 79 41 Op 6 . + CDS 86732 - 87490 1048 ## EF3184 hypothetical protein + Term 87511 - 87566 11.1 + Prom 87518 - 87577 5.2 80 42 Tu 1 . + CDS 87603 - 88679 1029 ## EF3183 cell wall surface anchor family protein, putative + Term 88708 - 88753 11.8 + Prom 88687 - 88746 2.1 81 43 Op 1 . + CDS 88781 - 89266 521 ## EF3182 hypothetical protein 82 43 Op 2 . + CDS 89250 - 90716 1069 ## EF3181 hypothetical protein + Term 90866 - 90933 31.1 + Prom 90843 - 90902 80.4 83 44 Op 1 . + CDS 91069 - 91566 488 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 84 44 Op 2 . + CDS 91591 - 92475 795 ## EF3179 hypothetical protein + Term 92489 - 92529 6.5 + Prom 92519 - 92578 2.7 85 45 Tu 1 . + CDS 92605 - 93741 1322 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 93747 - 93794 10.1 - Term 93735 - 93780 5.1 86 46 Tu 1 . - CDS 93794 - 94585 746 ## EF3177 hypothetical protein - Prom 94688 - 94747 3.3 + Prom 94523 - 94582 5.8 87 47 Op 1 . + CDS 94749 - 95132 326 ## COG3304 Predicted membrane protein + Prom 95136 - 95195 2.4 88 47 Op 2 2/0.172 + CDS 95221 - 95646 523 ## COG1959 Predicted transcriptional regulator 89 47 Op 3 . + CDS 95714 - 96334 850 ## COG2910 Putative NADH-flavin reductase + Term 96344 - 96396 13.5 - Term 96331 - 96385 9.3 90 48 Tu 1 . - CDS 96413 - 97618 1520 ## EF3173 hypothetical protein - Prom 97707 - 97766 8.2 + Prom 97712 - 97771 6.5 91 49 Op 1 5/0.000 + CDS 97810 - 99054 212 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + Prom 99058 - 99117 4.8 92 49 Op 2 . + CDS 99168 - 100214 1517 ## COG0468 RecA/RadA recombinase + Term 100240 - 100297 4.9 + Prom 100291 - 100350 7.1 93 50 Op 1 10/0.000 + CDS 100374 - 100679 351 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 94 50 Op 2 13/0.000 + CDS 100684 - 101934 934 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 95 50 Op 3 2/0.172 + CDS 101954 - 102295 388 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 96 50 Op 4 2/0.172 + CDS 102295 - 103740 1654 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 103757 - 103797 -0.2 97 50 Op 5 . + CDS 103818 - 105713 1360 ## COG3711 Transcriptional antiterminator + Term 105740 - 105772 3.2 + Prom 105746 - 105805 7.2 98 51 Tu 1 . + CDS 105909 - 107465 2055 ## COG1418 Predicted HD superfamily hydrolase + Term 107494 - 107547 17.1 + Prom 107494 - 107553 6.7 99 52 Op 1 . + CDS 107625 - 108422 941 ## COG1692 Uncharacterized protein conserved in bacteria + Term 108423 - 108481 5.1 100 52 Op 2 . + CDS 108511 - 108882 621 ## EF3168 hypothetical protein 101 52 Op 3 6/0.000 + CDS 108883 - 111459 2816 ## COG0249 Mismatch repair ATPase (MutS family) 102 52 Op 4 . + CDS 111491 - 113623 2168 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 103 52 Op 5 . + CDS 113648 - 114202 669 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation + Term 114208 - 114259 3.1 + Prom 114242 - 114301 3.5 104 53 Op 1 . + CDS 114335 - 114772 430 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase + Prom 114833 - 114892 4.9 105 53 Op 2 . + CDS 114947 - 115918 1088 ## COG0462 Phosphoribosylpyrophosphate synthetase + Term 115920 - 115980 11.2 - Term 115918 - 115957 8.3 106 54 Tu 1 . - CDS 116105 - 116506 96 ## EF3161 hypothetical protein - Prom 116705 - 116764 8.9 + Prom 116711 - 116770 4.3 107 55 Tu 1 . + CDS 116790 - 116915 170 ## + Term 117100 - 117138 5.0 - Term 117211 - 117251 -0.9 108 56 Op 1 11/0.000 - CDS 117332 - 117982 679 ## COG0637 Predicted phosphatase/phosphohexomutase 109 56 Op 2 . - CDS 117997 - 120708 2179 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) - Prom 120750 - 120809 4.9 110 57 Tu 1 . + CDS 121002 - 121715 731 ## COG2188 Transcriptional regulators + Term 121811 - 121869 17.2 - Term 121885 - 121926 1.1 111 58 Tu 1 . - CDS 121993 - 122091 102 ## - Prom 122111 - 122170 4.1 + Prom 121982 - 122041 6.2 112 59 Tu 1 . + CDS 122094 - 122792 811 ## EF3155 hypothetical protein + Prom 123097 - 123156 80.3 113 60 Tu 1 . + CDS 123355 - 124032 631 ## EF3154 hypothetical protein + Term 124040 - 124084 7.1 - Term 124035 - 124065 2.0 114 61 Tu 1 . - CDS 124073 - 124522 732 ## COG1970 Large-conductance mechanosensitive channel - Prom 124751 - 124810 7.7 + Prom 124573 - 124632 5.5 115 62 Op 1 14/0.000 + CDS 124731 - 125999 1211 ## COG0612 Predicted Zn-dependent peptidases 116 62 Op 2 3/0.034 + CDS 125992 - 127296 1414 ## COG0612 Predicted Zn-dependent peptidases + Prom 127322 - 127381 5.1 117 63 Tu 1 . + CDS 127464 - 128330 859 ## COG1426 Uncharacterized protein conserved in bacteria + Term 128342 - 128399 5.1 + Prom 128347 - 128406 9.0 118 64 Op 1 . + CDS 128457 - 128669 202 ## gi|255970662|ref|ZP_05421248.1| predicted protein + Prom 128687 - 128746 5.2 119 64 Op 2 . + CDS 128768 - 129346 331 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + Term 129350 - 129401 10.0 + Prom 129371 - 129430 4.5 120 65 Op 1 . + CDS 129464 - 129571 78 ## 121 65 Op 2 . + CDS 129513 - 129929 360 ## EF1844 hypothetical protein + Term 130002 - 130068 25.4 - Term 129991 - 130053 7.4 122 66 Tu 1 . - CDS 130077 - 130964 798 ## COG1737 Transcriptional regulators + Prom 131269 - 131328 13.8 123 67 Op 1 . + CDS 131374 - 132273 962 ## COG1023 Predicted 6-phosphogluconate dehydrogenase 124 67 Op 2 . + CDS 132286 - 133287 854 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 125 67 Op 3 . + CDS 133302 - 134408 1055 ## COG0371 Glycerol dehydrogenase and related enzymes 126 67 Op 4 13/0.000 + CDS 134421 - 135257 812 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 127 67 Op 5 1/0.241 + CDS 135278 - 136150 1203 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 128 67 Op 6 9/0.000 + CDS 136172 - 136678 596 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 129 67 Op 7 . + CDS 136756 - 137208 716 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 130 67 Op 8 . + CDS 137232 - 138305 1090 ## COG1312 D-mannonate dehydratase 131 67 Op 9 . + CDS 138310 - 138963 727 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase + Term 138970 - 139007 3.1 + Prom 138976 - 139035 6.7 132 68 Tu 1 . + CDS 139136 - 139606 590 ## COG4405 Uncharacterized protein conserved in bacteria + Term 139610 - 139667 -0.1 + Prom 139608 - 139667 5.0 133 69 Op 1 . + CDS 139782 - 140000 415 ## COG4443 Uncharacterized protein conserved in bacteria 134 69 Op 2 . + CDS 140017 - 140901 1109 ## COG1561 Uncharacterized stress-induced protein 135 69 Op 3 . + CDS 140957 - 141262 456 ## EF3130 hypothetical protein + Term 141267 - 141307 7.4 - Term 141254 - 141295 10.1 136 70 Tu 1 . - CDS 141305 - 142786 1570 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 142863 - 142922 5.0 + Prom 142915 - 142974 4.4 137 71 Op 1 25/0.000 + CDS 143009 - 143623 803 ## COG0194 Guanylate kinase 138 71 Op 2 . + CDS 143628 - 143930 480 ## COG1758 DNA-directed RNA polymerase, subunit K/omega + Term 143943 - 143993 4.1 + Prom 143975 - 144034 7.1 139 72 Tu 1 . + CDS 144080 - 144226 156 ## gi|227517267|ref|ZP_03947316.1| hypothetical protein HMPREF0348_0250 + Term 144309 - 144342 0.7 + Prom 144413 - 144472 9.2 140 73 Op 1 4/0.034 + CDS 144572 - 147004 2566 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 141 73 Op 2 26/0.000 + CDS 147031 - 147525 639 ## COG0242 N-formylmethionyl-tRNA deformylase 142 73 Op 3 20/0.000 + CDS 147518 - 148459 1261 ## COG0223 Methionyl-tRNA formyltransferase 143 73 Op 4 3/0.034 + CDS 148465 - 149844 1350 ## COG0144 tRNA and rRNA cytosine-C5-methylases 144 73 Op 5 17/0.000 + CDS 149846 - 150595 798 ## COG0631 Serine/threonine protein phosphatase 145 73 Op 6 7/0.000 + CDS 150592 - 152748 2299 ## COG0515 Serine/threonine protein kinase + Term 152787 - 152826 -0.4 + Prom 152755 - 152814 4.1 146 73 Op 7 10/0.000 + CDS 152997 - 153890 826 ## COG1162 Predicted GTPases 147 73 Op 8 6/0.000 + CDS 153914 - 154567 970 ## COG0036 Pentose-5-phosphate-3-epimerase 148 73 Op 9 . + CDS 154564 - 155208 527 ## COG1564 Thiamine pyrophosphokinase + Term 155212 - 155262 18.5 - Term 155255 - 155296 1.3 149 74 Tu 1 . - CDS 155310 - 155498 318 ## PROTEIN SUPPORTED gi|29377572|ref|NP_816726.1| 50S ribosomal protein L28 - Prom 155700 - 155759 6.3 + Prom 155625 - 155684 7.1 150 75 Op 1 . + CDS 155707 - 156462 419 ## COG3279 Response regulator of the LytR/AlgR family + Prom 156475 - 156534 3.3 151 75 Op 2 . + CDS 156558 - 156839 187 ## gi|227517279|ref|ZP_03947328.1| hypothetical protein HMPREF0348_0262 152 75 Op 3 . + CDS 156927 - 157448 179 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 153 75 Op 4 . + CDS 157459 - 157611 140 ## gi|315150890|gb|EFT94906.1| ABC transporter, ATP-binding protein - Term 157422 - 157469 2.1 154 76 Tu 1 . - CDS 157566 - 157739 98 ## - Prom 157804 - 157863 6.6 + Prom 157620 - 157679 6.4 155 77 Tu 1 . + CDS 157705 - 158751 659 ## L69089 ABC transporter permease protein + Term 158797 - 158842 3.2 + Prom 158854 - 158913 10.1 156 78 Op 1 9/0.000 + CDS 159000 - 159362 611 ## COG1302 Uncharacterized protein conserved in bacteria 157 78 Op 2 4/0.034 + CDS 159445 - 161121 2298 ## COG1461 Predicted kinase related to dihydroxyacetone kinase + Term 161150 - 161199 15.6 + Prom 161134 - 161193 4.1 158 79 Tu 1 . + CDS 161237 - 163273 2093 ## COG1200 RecG-like helicase + Prom 163289 - 163348 6.4 159 80 Op 1 3/0.034 + CDS 163376 - 164377 1245 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme + Prom 164400 - 164459 4.0 160 80 Op 2 . + CDS 164514 - 164753 431 ## COG0236 Acyl carrier protein + Term 164770 - 164807 6.6 + Prom 164966 - 165025 7.8 161 81 Op 1 44/0.000 + CDS 165050 - 166057 601 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 162 81 Op 2 6/0.000 + CDS 166057 - 167001 1069 ## COG4608 ABC-type oligopeptide transport system, ATPase component 163 81 Op 3 49/0.000 + CDS 167001 - 167963 1071 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 164 81 Op 4 5/0.000 + CDS 167991 - 168914 995 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 165 81 Op 5 . + CDS 168943 - 170724 2294 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 170731 - 170778 10.4 + Prom 170912 - 170971 15.4 166 82 Op 1 . + CDS 171103 - 171318 196 ## EF3105 hypothetical protein + Term 171334 - 171368 3.7 167 82 Op 2 . + CDS 171372 - 172097 445 ## COG1131 ABC-type multidrug transport system, ATPase component 168 82 Op 3 . + CDS 172042 - 173400 513 ## EF3103 hypothetical protein 169 82 Op 4 . + CDS 173387 - 173653 259 ## EF3102 hypothetical protein + Term 173672 - 173707 -1.0 + Prom 173914 - 173973 5.0 170 83 Op 1 . + CDS 174006 - 174524 435 ## EF3099 transporter accessory protein, putative 171 83 Op 2 . + CDS 174529 - 174615 71 ## + Prom 174689 - 174748 7.3 172 84 Op 1 6/0.000 + CDS 174779 - 175471 824 ## COG0571 dsRNA-specific ribonuclease 173 84 Op 2 1/0.241 + CDS 175492 - 179070 4358 ## COG1196 Chromosome segregation ATPases 174 84 Op 3 2/0.172 + CDS 179095 - 179922 1108 ## COG0561 Predicted hydrolases of the HAD superfamily 175 84 Op 4 . + CDS 179925 - 181253 1005 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 + Prom 181593 - 181652 80.3 176 85 Op 1 . + CDS 181812 - 182297 692 ## COG3542 Uncharacterized conserved protein 177 85 Op 2 . + CDS 182417 - 182815 465 ## COG3607 Predicted lactoylglutathione lyase + Term 182819 - 182862 12.6 - Term 182800 - 182856 16.5 178 86 Op 1 . - CDS 182866 - 183762 1090 ## COG1284 Uncharacterized conserved protein - Prom 183788 - 183847 7.0 - Term 183800 - 183858 8.2 179 86 Op 2 . - CDS 183952 - 184458 492 ## COG1335 Amidases related to nicotinamidase - Prom 184487 - 184546 7.7 + Prom 184431 - 184490 4.4 180 87 Tu 1 . + CDS 184629 - 186899 2413 ## COG2918 Gamma-glutamylcysteine synthetase + Term 186907 - 186955 10.0 - Term 187439 - 187476 5.6 181 88 Tu 1 . - CDS 187573 - 188025 529 ## COG5506 Uncharacterized conserved protein - Prom 188051 - 188110 4.5 182 89 Op 1 . + CDS 188127 - 188213 90 ## 183 89 Op 2 11/0.000 + CDS 188210 - 189157 951 ## COG4606 ABC-type enterochelin transport system, permease component 184 89 Op 3 10/0.000 + CDS 189154 - 190119 637 ## COG4605 ABC-type enterochelin transport system, permease component 185 89 Op 4 5/0.000 + CDS 190116 - 190871 274 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 186 89 Op 5 . + CDS 190910 - 191863 1240 ## COG4607 ABC-type enterochelin transport system, periplasmic component + Term 191874 - 191911 3.2 + Prom 192210 - 192269 6.0 187 90 Op 1 . + CDS 192307 - 193950 1662 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 188 90 Op 2 . + CDS 193972 - 195192 1253 ## COG2195 Di- and tripeptidases + Term 195194 - 195246 14.6 + Prom 195199 - 195258 3.2 189 91 Op 1 . + CDS 195278 - 195835 271 ## PROTEIN SUPPORTED gi|116511539|ref|YP_808755.1| SSU ribosomal protein S5P alanine acetyltransferase 190 91 Op 2 . + CDS 195870 - 196481 742 ## COG4493 Uncharacterized protein conserved in bacteria + Term 196544 - 196608 24.3 191 92 Tu 1 . + CDS 197219 - 201103 3182 ## EF3075 hypothetical protein + Term 201109 - 201167 21.7 - Term 201100 - 201152 17.6 192 93 Op 1 . - CDS 201159 - 201695 656 ## COG0681 Signal peptidase I 193 93 Op 2 . - CDS 201757 - 202305 694 ## COG1268 Uncharacterized conserved protein - Prom 202350 - 202409 8.1 - Term 202389 - 202422 2.1 194 94 Tu 1 . - CDS 202465 - 203076 1045 ## PROTEIN SUPPORTED gi|29377528|ref|NP_816682.1| 30S ribosomal protein S4 - Prom 203253 - 203312 8.5 195 95 Op 1 . + CDS 203401 - 204204 717 ## COG2116 Formate/nitrite family of transporters + Term 204217 - 204262 9.2 196 95 Op 2 . + CDS 204276 - 204929 610 ## COG4912 Predicted DNA alkylation repair enzyme 197 95 Op 3 . + CDS 204939 - 205715 681 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 205721 - 205764 12.4 - Term 205707 - 205752 12.0 198 96 Tu 1 . - CDS 205762 - 206325 789 ## COG0242 N-formylmethionyl-tRNA deformylase - Prom 206355 - 206414 8.5 + Prom 206316 - 206375 5.8 199 97 Op 1 26/0.000 + CDS 206569 - 206874 511 ## PROTEIN SUPPORTED gi|227517326|ref|ZP_03947375.1| ribosomal protein S15 + Term 206882 - 206930 7.1 + Prom 206950 - 207009 3.1 200 97 Op 2 . + CDS 207061 - 209175 1689 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase + Term 209188 - 209237 6.4 + Prom 209267 - 209326 6.4 201 98 Op 1 19/0.000 + CDS 209357 - 210217 1041 ## COG1792 Cell shape-determining protein 202 98 Op 2 2/0.172 + CDS 210214 - 210723 503 ## COG2891 Cell shape-determining protein + Term 210746 - 210791 8.2 + Prom 210737 - 210796 10.3 203 99 Tu 1 . + CDS 211028 - 212473 1867 ## COG3883 Uncharacterized protein conserved in bacteria + Term 212494 - 212557 13.7 + Prom 212503 - 212562 8.2 204 100 Op 1 . + CDS 212651 - 213220 565 ## COG1309 Transcriptional regulator 205 100 Op 2 . + CDS 213261 - 213731 641 ## COG0394 Protein-tyrosine-phosphatase 206 100 Op 3 . + CDS 213820 - 214050 386 ## EF3057 hypothetical protein + Term 214060 - 214101 7.5 - Term 214040 - 214097 13.1 207 101 Tu 1 . - CDS 214098 - 214832 732 ## COG3764 Sortase (surface protein transpeptidase) - Prom 214946 - 215005 7.2 + Prom 214930 - 214989 7.3 208 102 Tu 1 . + CDS 215066 - 215851 740 ## EF3055 hypothetical protein + Term 215852 - 215899 7.7 + Prom 215872 - 215931 5.7 209 103 Op 1 . + CDS 215955 - 216581 707 ## COG3212 Predicted membrane protein + Prom 216644 - 216703 5.4 210 103 Op 2 . + CDS 216745 - 217320 542 ## COG3859 Predicted membrane protein + Term 217324 - 217378 16.3 + Prom 217358 - 217417 6.6 211 104 Tu 1 . + CDS 217438 - 218550 826 ## gi|227517339|ref|ZP_03947388.1| hypothetical protein HMPREF0348_0322 + Term 218558 - 218607 10.5 - Term 218540 - 218601 14.6 212 105 Tu 1 . - CDS 218623 - 218985 336 ## EF3052 hypothetical protein - Prom 219035 - 219094 8.1 + Prom 219092 - 219151 5.5 213 106 Op 1 . + CDS 219211 - 219978 731 ## EF3051 hypothetical protein + Term 219990 - 220037 3.2 214 106 Op 2 . + CDS 220055 - 220606 443 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) + Term 220607 - 220654 12.1 - Term 220594 - 220641 12.1 215 107 Tu 1 . - CDS 220644 - 222299 1666 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 222391 - 222450 7.6 216 108 Op 1 . - CDS 222502 - 222612 62 ## 217 108 Op 2 . - CDS 222618 - 222959 427 ## COG5584 Predicted small secreted protein - Prom 223011 - 223070 8.6 + Prom 223091 - 223150 5.6 218 109 Op 1 1/0.241 + CDS 223266 - 224342 1182 ## COG1363 Cellulase M and related proteins 219 109 Op 2 . + CDS 224354 - 224668 469 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 224748 - 224791 -0.9 220 110 Tu 1 . + CDS 224816 - 225271 672 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 225310 - 225352 -1.0 + Prom 225303 - 225362 4.6 221 111 Tu 1 . + CDS 225482 - 226102 838 ## COG0073 EMAP domain + Term 226139 - 226186 7.4 + Prom 226286 - 226345 15.6 222 112 Op 1 . + CDS 226424 - 226750 327 ## SPJ_0722 hypothetical protein + Term 226773 - 226825 7.4 223 112 Op 2 . + CDS 226838 - 228853 1374 ## SZO_04440 membrane protein 224 112 Op 3 . + CDS 228850 - 229455 238 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 225 112 Op 4 . + CDS 229489 - 229554 56 ## + Term 229646 - 229698 11.1 - Term 229634 - 229685 8.2 226 113 Tu 1 . - CDS 229762 - 231051 1503 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 231087 - 231146 8.6 + Prom 230986 - 231045 6.0 227 114 Tu 1 . + CDS 231181 - 231306 68 ## gi|307292049|ref|ZP_07571917.1| hypothetical protein HMPREF9509_02345 + Prom 231364 - 231423 4.2 228 115 Op 1 . + CDS 231452 - 231931 522 ## COG1576 Uncharacterized conserved protein 229 115 Op 2 . + CDS 231979 - 232821 726 ## COG3680 Uncharacterized protein conserved in bacteria + Term 232876 - 232926 10.0 - Term 232860 - 232917 13.3 230 116 Tu 1 . - CDS 232919 - 234307 1621 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 234461 - 234520 5.5 231 117 Tu 1 . + CDS 234655 - 235164 588 ## EF3021 hypothetical protein + Term 235185 - 235219 4.0 + Prom 235192 - 235251 6.6 232 118 Op 1 . + CDS 235303 - 235767 506 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 233 118 Op 2 . + CDS 235770 - 236696 829 ## EF3019 hypothetical protein + Term 236788 - 236830 7.0 + Prom 236721 - 236780 5.9 234 119 Tu 1 . + CDS 236848 - 238629 1994 ## EF3018 hypothetical protein + Term 238636 - 238673 7.3 + Prom 238655 - 238714 2.7 235 120 Op 1 . + CDS 238741 - 239481 731 ## COG0101 Pseudouridylate synthase 236 120 Op 2 . + CDS 239505 - 240464 788 ## COG1715 Restriction endonuclease + Prom 240472 - 240531 7.1 237 121 Tu 1 . + CDS 240581 - 240964 286 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component + Term 240987 - 241034 11.3 + Prom 241001 - 241060 8.9 238 122 Tu 1 . + CDS 241093 - 242355 1396 ## COG3633 Na+/serine symporter + Term 242358 - 242407 13.0 + Prom 242388 - 242447 2.9 239 123 Tu 1 . + CDS 242505 - 245057 2393 ## COG0474 Cation transport ATPase + Term 245080 - 245123 6.7 - Term 245025 - 245057 2.0 240 124 Tu 1 . - CDS 245063 - 246511 1117 ## EF3013 hypothetical protein - Prom 246535 - 246594 3.9 - Term 246559 - 246592 4.0 241 125 Op 1 . - CDS 246603 - 247784 788 ## EF3012 hypothetical protein 242 125 Op 2 . - CDS 247828 - 249252 1562 ## EF3011 hypothetical protein 243 125 Op 3 . - CDS 249239 - 250798 1904 ## COG0074 Succinyl-CoA synthetase, alpha subunit 244 125 Op 4 . - CDS 250776 - 251642 531 ## EF3009 hypothetical protein - Prom 251674 - 251733 4.6 245 126 Tu 1 . + CDS 251773 - 253431 1221 ## COG2508 Regulator of polyketide synthase expression + Term 253462 - 253515 8.4 + Prom 253434 - 253493 5.5 246 127 Tu 1 27/0.000 + CDS 253535 - 255124 1683 ## COG0286 Type I restriction-modification system methyltransferase subunit + Prom 255158 - 255217 52.2 247 128 Op 1 . + CDS 255312 - 256325 540 ## COG0732 Restriction endonuclease S subunits + Term 256328 - 256379 6.8 + Prom 256367 - 256426 3.9 248 128 Op 2 . + CDS 256448 - 256939 519 ## MYPU_3700 hypothetical protein + Term 256945 - 256983 3.0 - Term 256933 - 256971 5.2 249 129 Op 1 2/0.172 - CDS 256975 - 257904 762 ## COG0582 Integrase 250 129 Op 2 . - CDS 257988 - 258923 562 ## COG0732 Restriction endonuclease S subunits - Prom 259163 - 259222 50.0 + Prom 259162 - 259221 53.2 251 130 Op 1 . + CDS 259299 - 262442 3171 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 252 130 Op 2 . + CDS 262458 - 263129 522 ## EF3006 hypothetical protein + Prom 263212 - 263271 3.5 253 131 Op 1 . + CDS 263291 - 264379 1061 ## COG0659 Sulfate permease and related transporters (MFS superfamily) 254 131 Op 2 . + CDS 264436 - 264906 475 ## COG0659 Sulfate permease and related transporters (MFS superfamily) + Term 265007 - 265076 24.4 - Term 265002 - 265056 15.1 255 132 Tu 1 . - CDS 265070 - 265762 592 ## EF3003 putative lipoprotein - Prom 265784 - 265843 12.2 + Prom 265760 - 265819 12.4 256 133 Op 1 2/0.172 + CDS 265955 - 266407 561 ## COG1846 Transcriptional regulators 257 133 Op 2 . + CDS 266426 - 266938 531 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 266951 - 267002 12.2 + Prom 267283 - 267342 6.3 258 134 Op 1 2/0.172 + CDS 267530 - 269026 1479 ## COG1953 Cytosine/uracil/thiamine/allantoin permeases 259 134 Op 2 4/0.034 + CDS 269027 - 270391 1465 ## COG0044 Dihydroorotase and related cyclic amidohydrolases + Prom 270491 - 270550 6.1 260 135 Op 1 4/0.034 + CDS 270573 - 271796 1309 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 261 135 Op 2 . + CDS 271818 - 272603 1007 ## COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization 262 136 Tu 1 . - CDS 272721 - 274346 1325 ## COG2508 Regulator of polyketide synthase expression - Prom 274372 - 274431 6.6 + Prom 274319 - 274378 9.9 263 137 Op 1 . + CDS 274518 - 275726 1252 ## COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase + Term 275741 - 275787 5.3 264 137 Op 2 . + CDS 275824 - 277083 1332 ## COG0477 Permeases of the major facilitator superfamily + Term 277089 - 277138 10.0 - Term 277075 - 277126 11.2 265 138 Tu 1 . - CDS 277129 - 277389 363 ## COG1937 Uncharacterized protein conserved in bacteria - Prom 277416 - 277475 5.6 + Prom 277470 - 277529 3.8 266 139 Op 1 3/0.034 + CDS 277558 - 277872 387 ## COG0607 Rhodanese-related sulfurtransferase 267 139 Op 2 3/0.034 + CDS 277873 - 279522 2079 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 268 139 Op 3 . + CDS 279515 - 279814 462 ## COG0607 Rhodanese-related sulfurtransferase + Term 279827 - 279867 5.1 + Prom 279886 - 279945 10.8 269 140 Op 1 24/0.000 + CDS 279986 - 281152 1523 ## COG0845 Membrane-fusion protein 270 140 Op 2 36/0.000 + CDS 281145 - 281819 351 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 271 140 Op 3 . + CDS 281816 - 283024 1282 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 283043 - 283070 0.1 + Prom 283158 - 283217 10.1 272 141 Op 1 . + CDS 283406 - 284071 534 ## EF2984 transcriptional regulator, putative + Prom 284085 - 284144 3.1 273 141 Op 2 . + CDS 284168 - 285616 1738 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 274 141 Op 3 . + CDS 285682 - 286209 553 ## COG0406 Fructose-2,6-bisphosphatase + Term 286213 - 286256 9.6 + Prom 286238 - 286297 7.7 275 142 Op 1 3/0.034 + CDS 286330 - 289143 2025 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain 276 142 Op 2 9/0.000 + CDS 289215 - 289616 434 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 277 142 Op 3 13/0.000 + CDS 289636 - 290130 656 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 278 142 Op 4 13/0.000 + CDS 290154 - 290903 1042 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 279 142 Op 5 . + CDS 290903 - 291754 1030 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID Predicted protein(s) >gi|237663592|gb|GG668926.1| GENE 1 204 - 1052 729 282 aa, chain - ## HITS:1 COG:BS_ybbH KEGG:ns NR:ns ## COG: BS_ybbH COG1737 # Protein_GI_number: 16077237 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 10 257 13 255 283 96 28.0 5e-20 MNLIECLEQKERYTYNEGLIIDFILSHTERVLHMSIYELAEATNSSTSTIVRLCKKTETS GFKEFKIRLSRDLEIHYQAIRNVDANMPFLAQDSDLLIAKKIAQLTTETVQSTQQLLTEA MLNKSIDLLLTAENILAVGVSNSYIRLTDFQTKLLRIQLFIHLIPYQAEQFYLAINATKN DVAILVSYSGNTAEIVNEARIFAEGGTPIIAITSDLNSQLAKYATVILPIPNVEHADFKV STFSSQLAIEYILNVLYSCIFSRNFDKNYTSQKNTPTSILKF >gi|237663592|gb|GG668926.1| GENE 2 1207 - 2514 1474 435 aa, chain + ## HITS:1 COG:SPy2050 KEGG:ns NR:ns ## COG: SPy2050 COG1455 # Protein_GI_number: 15675820 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Streptococcus pyogenes M1 GAS # 10 430 7 432 434 276 35.0 6e-74 MDKLTNWVEQTVVPKVSRITSLRYFQALRNGFFAIMPLTIIGSIFMLITDFPVAGYGDFM ARIFGAGWADMISPAYRATFNMMGIIFAGTMSYKLAESYEMDRLTSLILGIVAYVVVLPK TVTTESGEVVTKVLSFDWLGTQGVITAIIMSILSVELTRFCIKKKLVIKMPDSVPSMVSQ AFSALIPGIFVVAVALLINGIGLSFADSFPQLIYAVIQAPLQGLIGTPFAIIIVAGLNGL FWWFGIHPTVINSMLYPILYANADKNQSLAELGQLTAQNGNFGTVQMLDQFATIGGAGCT IGLAIAMAIVGHSSRMKAMSKISFVPAFFNINEPLIFGLPVIFNPLLLIPIAVAPIVSVL IAFLSMKIGFMSMFTNIQAPWATPFLFSGFLVGKWQGAVTQVLAVAASVVIYYPFVKALD RQYQKEEAHEVPETL >gi|237663592|gb|GG668926.1| GENE 3 2534 - 3721 1111 395 aa, chain + ## HITS:1 COG:mll0856 KEGG:ns NR:ns ## COG: mll0856 COG0626 # Protein_GI_number: 13470999 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Mesorhizobium loti # 24 388 31 393 395 260 38.0 4e-69 MHVENDENICCEVEKGMEKMYHPMVPELVQTSSFYFPTYEEFMAASIDEKNNYVYTRGTN PTTEILEKKIARLERGKKCKVFASGMGAISATLFTLLQQGDHVLMVNTIYGESVSFVQYL EKFGVSLTKVDVTETEELFQFVQENTKVIYFESPSSQKFELLDLEKITALAQKIGAYTVI DNTWASPLFQHPLCHNVDLVIHSCSKYIGGHSDIVAGAVIGKAALVDQIFEHGHQALGAV NSPFNSWLALRGIRTMPVRLAHQSQAIQTVLSALQKDPRISRLYHPFVGNQQQQALAEKY LTGYGSLFAIDLKDTDFERLKTFVNALTLVTIGVSWGGFESLALPVFKGNNLAAVQKRGL SPAHIRMYVGLEEPTSIIEDIQQALDQAYGEESFL >gi|237663592|gb|GG668926.1| GENE 4 4130 - 4597 358 155 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 [Bacillus selenitireducens MLS10] # 4 154 2 154 158 142 47 2e-32 MSNQNTSDLIEAYLKKILEESNKIEIRRAEMANLFNCVPSQINYVINTRFTIQRGYAVES KRGGGGYIRIVKVQISDNDQLLKQMDQLIGATLTEKDALTFIQTLYEEEVITKKEGNLML AALSKSTLNGLGNHEDFLRAQIMRSFLERLSYEEE >gi|237663592|gb|GG668926.1| GENE 5 4600 - 7095 2492 831 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 5 810 6 806 815 964 60 0.0 MDELFTESAKAVLAIAQEEAKYFRHQSVGSEHLLLALVLEPNGIAGKTLRQLNTDTEDIR EEIEHLSGYGTMQSPMGNNNLYLPYSPRAKQIFAYAGDEAKRLGAQKIGTEHLLLGLLRD EEILASRILVNLGLSLSKMRQLLLKKMGVSEPNGAQRRRNGQNKNAPQGTPTLDSLARDL TKLAREQSLDPVVGRGTEVRRLIQILSRRTKNNPVLVGEPGVGKTAIAEGLAQKIVNREV PEDMQGKRLMMLDMGALVAGTKYRGEFEDRLKKVVDEIYQDGQVILFIDELHTLIGAGGA EGAIDASNILKPALARGELQTIGATTLDEYQKYIEKDAALERRFARIQVAEPTPEEAEEI LKGLRSRYEKHHGVEITDEALHAAVQLSIRYLNDRQLPDKAIDLMDESAAKVRLDKADQP SEINELRTEISQLITEKEEAIQNQSFESAARIRQKEKQVMEKLEELIAVKEKSLSGYSTQ VTEEDVAGVVSQWTGVPLQQLEKKESERLMELETILHQRVVGQNEAVEAVSRAIRRARSG LKDPARPIGSFMFLGPTGVGKTELAKALAEAMFGSEEALIRVDMSEFMEKYSTSRLIGSP PGYVGYEEGGQLTEKIRQRPYSVILLDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFR NTILIMTSNLGATAIREEKHVGFNVKDISKNHELMQKRIMEELKKAFRPEFLNRIDETVV FHSLKQEEIHEIVKIMSQSVVKRMAEQEVKVKITPAAIEVIGKVGFDPEYGARPIRRALQ KEVEDRLSEALLSGQIQLGDKVTLGASKGKITLNVRAPKAPKTEAKELQTV >gi|237663592|gb|GG668926.1| GENE 6 7313 - 8347 841 344 aa, chain + ## HITS:1 COG:Cj0557c KEGG:ns NR:ns ## COG: Cj0557c COG1289 # Protein_GI_number: 15791918 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 20 328 29 337 361 98 27.0 2e-20 MEQSFFRELLHYQRPKDNPFRLVFAGLVMFSILFLGYINHQLLISSFGSLGIFTFLYYQP LPLKQLMTRLSVVGSYLFLGNLLGMLSTHIAWLIPIVVALVGFGGRFFFEVYDISKPGAF FGVMVTAMGASTSIPLAKIPFMSGCMLLGIGFSILFALVLHFTEKEISAPLAKRSLRERI YRHPEAPLDSIYYSFVLFFAVYISESLHLQNPYWLVVSCASILQGDNLRAIKQRNIQRIF GTTIGLVISAFLLNLALTTFESIVVITILFVTVEYFIRRNYGLAQFFTTPMALMLSLLVR QQYVITLIQFRFLGIVLGSLLGLAAAWLFTVVVTFYERKYHLNE >gi|237663592|gb|GG668926.1| GENE 7 8528 - 9448 1335 306 aa, chain + ## HITS:1 COG:L54059 KEGG:ns NR:ns ## COG: L54059 COG0826 # Protein_GI_number: 15673973 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Lactococcus lactis # 1 306 1 307 307 358 56.0 9e-99 MIELIATAESVEQAVELLATGVDTLYIGEETFGLRLPVSFTRDEQREIVKRAHEMGKQVL VAVNGIMHPEKMKLVPEYLTFLKEINVDKITLGDPGIVFIMQRDGLEIPYVYDGETLVTS SRQINFWSKRGAIGAVLAREVPFEEMVAMEENLAVPAEILVYGATCIHQSKRPLIQNYYN YTKNDKGVTKDEGLFISEPKKPETHYSIYEDSHGTHIFANNDVNLMNELTNLYDHHYRTW KLDGLYTPGENFVAIARLFAEAKAALEAGTWSEDQAAHATAEIEKLHPTGRGLDNGFFDL SADAIK >gi|237663592|gb|GG668926.1| GENE 8 9476 - 10723 1358 415 aa, chain + ## HITS:1 COG:SP1429 KEGG:ns NR:ns ## COG: SP1429 COG0826 # Protein_GI_number: 15901282 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Streptococcus pneumoniae TIGR4 # 7 415 3 410 428 631 74.0 0 MKVMTERTLKRPEVLAPAGTLEKLKVAIRYGADAVYIGGNAYGLRSRAGNFTPEEMAEGV AFAREHNAKVYVAANMVTHEGNQEGAGAFFRELRDIGISAVIVSDPALIEICATEAPGLP IHLSTQASATNYETLEFWKNEGLERVVLAREVSMEEVAAIRENTDIEIEAFIHGAMCISY SGRCTLSNHMSMRDANRGGCSQSCRWKYELFDMPFGTERRSKTSEGEVEEEFSMSAVDMS MIEHIPELIENGVDSFKIEGRMKSIHYVSTVANVYKKAVDSYMEDPENYVCQQEWIDELW KVAQRELATGFYYNTPSENEQLFGERRKIPQYKFVGEVIAYNEKTQVATIRQRNLFSVGD EIEFYGPGFTHFHQTVKEMYNEDGEAIDRAPNPMMLLTMEVTQPVAVGDMIRKKK >gi|237663592|gb|GG668926.1| GENE 9 10747 - 12309 1507 520 aa, chain + ## HITS:1 COG:lin0472 KEGG:ns NR:ns ## COG: lin0472 COG2508 # Protein_GI_number: 16799548 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Listeria innocua # 1 517 1 524 531 325 35.0 1e-88 MSVRVNDLLKLPSLREATVLSGKNQLDTSVASLSFLEVSDMSLFSEKLHKTNEYHAGEIL IGSFCAIRHDVVKQCETIRHLHELGEVGLILYYVGIIVPKVAEEVIQLADSLGFILIQMP KNDPTLRYNEVIYEVMKLLVNKNKMTSFATDLLEKVSLLPEQNRSVEMTLKILSDFLKVN IALTTYTNEIISTINWPRSTKLPLTKLLYQSQEKVALGETTYFITSQKLPQKDGQTLKLY FIREEEQLTSFEMNQAVEVVQMALNLWGKNYDEVSEYALVQAIINDESDKMYQLAKKLMI DISSVETMWLLPIWQQGQEIHAIQQDLKDFLRYYYQTTIVQQTENYLIVLLGNYLHKQPE ATISKEYLQATDYQVYLGEIILCPKVRNTTEVRVSYQTVNQVAPFLKRVYPQRKVLSIAE IRTVQQMMTCLQAGEEAIQQRLAVIQPLLKESEQLMTLGTFLLDASSDFKECGERLFVHK NTVKYRISKINEALGYDMTNAAEAYEVYLAMILYRLVTNE >gi|237663592|gb|GG668926.1| GENE 10 12593 - 13861 1490 422 aa, chain + ## HITS:1 COG:lin0473 KEGG:ns NR:ns ## COG: lin0473 COG1457 # Protein_GI_number: 16799549 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Listeria innocua # 2 420 4 422 427 508 68.0 1e-143 MKLKNEQQQSWLSLAFVWAGAMISVPGLIIGGTLVAGMPLWEALLTGFIGYGIIVILMIL QGIQSSDLQEPSVKVASQVFGIQGSQKIISIILAIACLGWFGLQANVSGGAFTNFLKIYG IDLPVSLSSLIWGVIMLISALYGIKILKILNYFAVPVLVLVCLYGLVASLRNNGWEAVSQ YTPQTAGSFMSGLSMTVGSFALGAVIAGDYSQYVSSRKDVVKAATLGILPTGLLMIGVGA VLTIASNTADITEVFMNLGFPVLGIIALILATWTTNAVNAFSGGLALINVFDIPKEKEKV AVGAAGAIGTLLAVVGILNYFTPIMSVLSAMVPPVAGVMIAAYWLINKGDRTKWQPTPGV NKLGVFSWLIGAAVGGIPVIMSFFPNAPQLPNQPLIGIVLSFVIYYFGAKRQQTNTESLE ME >gi|237663592|gb|GG668926.1| GENE 11 13881 - 14975 1302 364 aa, chain + ## HITS:1 COG:lin0474 KEGG:ns NR:ns ## COG: lin0474 COG3535 # Protein_GI_number: 16799550 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 364 1 363 366 565 76.0 1e-161 MRYLDAEAIENIATGAAFLGTGGGGDPYIGKMMALSAIEENGPVKLVSPEEIAAEDFFLP AAMMGAPSVAIEKFPKGDEFVRVFEKLGKYLDQETIAGTFPMEAGGVNSMIPIVVAAKLG IPLVDCDGMGRAFPELPMVTFHLNGMSATPMAITDEKGNIGIMETIDNTWTERLARVQTV EMGASALVSIYPATGKQLQDYGIHNIVTLSEEIGKVIRGTYADEQEKRQALVEVTDGFEL FQGKILDVEREVKGGFNLGRVKLSGLNSDAGSEAVVHFQNENLIAEKDGQVIAMTPDLIC MVDLETLTPVTTESLKYGKRVQVMGLKANAAWRTKKGIETVGPRYFGYEMDYQPLENLVA KEDK >gi|237663592|gb|GG668926.1| GENE 12 14976 - 16529 1973 517 aa, chain + ## HITS:1 COG:lin0475 KEGG:ns NR:ns ## COG: lin0475 COG0145 # Protein_GI_number: 16799551 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: N-methylhydantoinase A/acetone carboxylase, beta subunit # Organism: Listeria innocua # 1 516 1 515 516 729 74.0 0 MYKIGIDVGGTNTDAVILDHQLNLIHSVKVPTTDDIQTGIAGALNKVLAESAVDPTKVTH AMLGTTQCTNAIVERKKLAKVGVLRLGYPATASVLPYTAWPKDLVATLSETYALAHGGYE YDGQPLTALDEEELRGILASWRGEVEAIAVIGVFSSLKNDQELFVQALAKEVLGADVPVS CSSMIGSVGLIERENATILNAALHKVIKVTSEGFEQALEQEKIHHAQVYLCQNDGTLMSL TYAKQFPILTIACGPTNSIRGASYLAGLKDAVVLDVGGTTSDIGVLVDGFPRESSLAVDV GGVRTNFRMPDIVSIGVGGGSLVREQPDGSVTVGPDSVGYRITQEALVFGGTQLTTTDIA VRLGHAQVGDPSKVAHLDQTFAEKVYQKIGELVSEAIDRMKTSSADVTVVLVGGGSIIIP EELTGVKALIRNENGAVANAIGASIAQISGQYEQIYVYSKIQRDAALADAQEKAVQQAEL AGAVPGTIELVEVEETPLAYHPENATRLRVKVVGNMY >gi|237663592|gb|GG668926.1| GENE 13 16603 - 17001 555 132 aa, chain + ## HITS:1 COG:no KEGG:EF3271 NR:ns ## KEGG: EF3271 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 132 1 132 132 261 96.0 7e-69 MAKLFAYQIGQNPRIQTDLLVDPQLFEDEHGCAGGVGFGLADCVQTGMFTDIEVIKRYLH EATYVFINGDFDRLSYLEIGIALSLGKTLYVITMNPNVTKEDLGIPFDNATIEFLSPSSF TERINETEAAEN >gi|237663592|gb|GG668926.1| GENE 14 17088 - 18437 465 449 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 443 1 442 458 183 29 6e-45 MKTYDYIVIGGGSGGIASANRAGMHGANVLLIEGNEIGGTCVNVGCVPKKVMWQASSMME MMERDTAGYGFDVEIKNFSFKQLVENREKYIDFLHGAYNRGLDSNNIERIHGYATFTGEQ TIEVNGTEYTAPHILIATGGRPKKLGIPGEEYALDSNGFFALEEMPKRVVFVGAGYIAAE LAGTLHGLGAETHWAFRHERPLRSFDDMLSEKVVERYQEMGMQIHPNATPAKIEKTAQNE YVITFENGESITTDAVIFGTGRQPNTDQLGLENTKVALDEKGYVKVDKFQNTTQNGIYAV GDVIGKIDLTPVAIAAGRRLSERLFNGQTDLYLDYNLVPTVVFTHPPVATIGLTEKAALE EYGEDQVKIYRSSFTPMYFALGEYRQKCDMKLICVGKEEKIVGLHGIGIGVDEMLQGFAV AIKMGATKADFDNTVAIHPTGSEEFVTMR >gi|237663592|gb|GG668926.1| GENE 15 18636 - 18998 436 120 aa, chain + ## HITS:1 COG:lin0257 KEGG:ns NR:ns ## COG: lin0257 COG1539 # Protein_GI_number: 16799334 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Listeria innocua # 1 119 1 118 124 85 39.0 2e-17 MDKIRINNLKFFTKNGVLAEEKRLGQQVEIDLEMQLSLAEAGRTDDVTQTVNYAEVNELI AQRVNNHSYDLIEGLASAILDDISADYQEQLDKIIIKIRKYSVPMPGLFDNIEIEMEREV >gi|237663592|gb|GG668926.1| GENE 16 18999 - 19484 552 161 aa, chain + ## HITS:1 COG:SMc00465 KEGG:ns NR:ns ## COG: SMc00465 COG0801 # Protein_GI_number: 15965562 # Func_class: H Coenzyme transport and metabolism # Function: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase # Organism: Sinorhizobium meliloti # 5 148 12 155 174 121 41.0 7e-28 MIGYVALGSNVGDPYTNLVKARNYLNEDPQIQVVASSKLYETDPYGYTDQDDFLNAVLKI DTSYTAEELLAVTQGIEQAMKRKKLIHWGPRIIDIDILLLGEQSVTLPHLQVPHQELTKR SFVLIPLSDVYAEEQLLGAPIATWIQRSGNQEEVRVSEKEW >gi|237663592|gb|GG668926.1| GENE 17 19487 - 20047 648 186 aa, chain + ## HITS:1 COG:BS_mtrA KEGG:ns NR:ns ## COG: BS_mtrA COG0302 # Protein_GI_number: 16079335 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Bacillus subtilis # 1 174 1 174 190 203 60.0 1e-52 MEQEKQAQIEQAVTTILEAVGEDTQRAGLIDTPKRVAKMYAEVFSGLTEPEFDDYKLFDS LNEGEMVLVKDIAFYSMCEHHLLPFYGKVHVAYLPEGGKVLGLSKLPRLVEHCAKRPTVQ EDLTVTIARKLQENIPVKGIAVAIEAEHMCMTMRGVKTPQSSTKTFQFTGLFKEQEWKNQ FLMEIR >gi|237663592|gb|GG668926.1| GENE 18 20051 - 20644 206 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|162456259|ref|YP_001618626.1| putative ribosomal protein [Sorangium cellulosum 'So ce 56'] # 1 186 6 196 207 84 29 6e-15 MEIIVGTNNQGKLKEMQSGLKDPAIQLVSYRKYTTSQEQPAETGTTYAENAYLKARFFQQ LIGRPVLGDDGGLTLTAFPDLLGIYTSRFFHSANPEEQNRELLHLFEGQQSTRELTLSAT LVYTLDDDKLLQTEAALTGELVEPRGTGGYGFDPIIYLPDRGKTLAELSMSERMKISPRM QALRKMIQQIKEQYDND >gi|237663592|gb|GG668926.1| GENE 19 20637 - 21428 966 263 aa, chain + ## HITS:1 COG:slr2026 KEGG:ns NR:ns ## COG: slr2026 COG0294 # Protein_GI_number: 16329867 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Synechocystis # 1 257 21 289 289 194 40.0 1e-49 MIDLKKNYQIMGIVNTTPDSFSDGGSYTTVDVAYQHALHLLEAGADILDIGGQSTRPGYE EVSPQVEADRVLPLIKKIRETSLAPISVDTYYPEVAEAAIQAGATMINDIKGLDTPGMAE VLAQYPEVQVVIMHSRKRQSLSLKEELHLFYTEKIEQCQKYGLSLEKICFDPGIGFHKTV AENLQLLKDPNAFRYQDYPLLYGVSRKRTIGALTNEPEPANRDFGSAAASLYAAQQGVEI LRVHNVQGLKQTFDVWRVLSEKE >gi|237663592|gb|GG668926.1| GENE 20 21851 - 23929 1486 692 aa, chain + ## HITS:1 COG:no KEGG:PEPE_0977 NR:ns ## KEGG: PEPE_0977 # Name: not_defined # Def: hypothetical protein # Organism: P.pentosaceus # Pathway: not_defined # 1 691 1 680 681 614 46.0 1e-174 MKKHNYLLILLWIVGGIFLGVEKVEAAPRPLTELGYFHWANQSITPAANTFIMHYGENTS VEPIEGEVYSNYMAVSRTTNKSKALVKNVGFYEGKAVNLLVTLQRNKSNLDGGSISFTES YFLGITIKGEMLVTYDFVDNYGQPLTIKTAFNYYGLNSNKYVGYKNPGTIIDALYAENPT HILYDTWDGGDDDYWLYLKNVTAGVPWRDPRQRFEMTTKSISTVTFVVHNNDTTPSSIVY FTDFLAKPEFPPAYAMDTYFENAETAVCLNVQQTIPNIDQWTKPSQMAINVNLNQVNQTK QYQFDKVLVTDFKGEDLTDLFTSQTDGENVQIMTKNLSDSRLYDTVLQYKVYLKWQGTQN PVDTALISSGKLDLPFSARTLLDGENLEETTATSSVNYVGKATTVFLNEQDNAIHEPVTK EGILTTPFDLSNQYPQIAGYEPIKTQQDQGMFLPEEQTIIHRYREKKLLQFKLMDEENPL LVSRFTNQREVTFSFCHDPSTNITLIAKCGTEEKELKKYVDAPESVVDKVTYTFPEHWLN REVFFYIKDENNQESEKDSRTLQKEAGPKLILPDTINFGVNEIPATETMISSITNKEIRI EDTSKLDKSRWTIKVKEEQPLKNENGELLDKRISYGEKNQRVLINADSQPILQGSGNATA NLTKQLQLTIFPSDPVGRYSGVLRWSLEDAPE >gi|237663592|gb|GG668926.1| GENE 21 24157 - 24240 62 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTVFEALMLAIAFATLIVKISNKNDKK >gi|237663592|gb|GG668926.1| GENE 22 24433 - 24633 205 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517151|ref|ZP_03947200.1| ## NR: gi|227517151|ref|ZP_03947200.1| hypothetical protein HMPREF0348_0134 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0134 [Enterococcus faecalis TX0104] # 1 66 1 66 66 105 100.0 9e-22 MAFAHINIENMVVFGGISLSIYILYTVLNIIEFKYYDKVSFDEEELDRIDTQEYARYFSE LLTENQ >gi|237663592|gb|GG668926.1| GENE 23 25165 - 26970 1913 601 aa, chain + ## HITS:1 COG:no KEGG:FMG_1202 NR:ns ## KEGG: FMG_1202 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 427 601 33 214 214 100 34.0 2e-19 MKKITKALIISTLGIQVCLPIVSYATSEEQPSEVSQQLSASLKVAGVPESENYKTQFSVK PSENLYKGSMTFRPANQNELLIDGFVNNNNIQIAITVDRTKPRTLYIYELSPNNSTRQKY TLTEGSTVNSKEFPGHRYVYPGGKYDNIILERYNTRAAIWNLKRTLLQNDTKTVNKVIVP IIDQLEQETHYIIAGTTKEEPENQLLESVKQSGFKGDAYTTGAPETIVKDGVTYALTDPL PTNANGYLSKYYNGWSHLYNYGNYDLRRTQIDDSGTQLIELLRKNGTVEQSAKVAAGQSH TFPNKGTAGGPVTAVNFYNGIPETTYHVVYQYIAVETEYRGQIVDQDGNKISKEGLELPS FEGKRGETIQVNPEDLPEIPGYIKPSAPLELVIPETGSVIEIPYERYIPYDPDNGYQPIE ITEGKSNNKDYNWYFDHQDTGGQLLVNTAVMAEHWYHPGSTKTVGEAEKSQPVKWDSSAL AFYMFRNKVPFHYYREPTLEFMKNEIDEGRIFITYVETSELFYNPTPDSTWGRFYEETGR NNIIVKGYKYINNRLYFETYDPLSGGRKHKNGEPLGKDRLYDAEEFMRAMEKGVPIIQVI G >gi|237663592|gb|GG668926.1| GENE 24 27058 - 27402 573 114 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517153|ref|ZP_03947202.1| ## NR: gi|227517153|ref|ZP_03947202.1| hypothetical protein HMPREF0348_0136 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0136 [Enterococcus faecalis TX0104] # 1 114 1 114 114 207 100.0 1e-52 MKKAIKKVSMCLGVTAFLGAGALATTTSAFATEQPEVASEAISTYAATGFYRVLYDTTLL FSDNADIIHIPAGFMIYHTGNEMEWGGMKFYEMNVMQGTEVYRGYVQDTALVKA >gi|237663592|gb|GG668926.1| GENE 25 27464 - 28450 1024 328 aa, chain - ## HITS:1 COG:lin2790 KEGG:ns NR:ns ## COG: lin2790 COG0142 # Protein_GI_number: 16801851 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Listeria innocua # 1 327 1 325 326 334 48.0 1e-91 MNIHPMWNTYPTLSKELTTTLRLMEQAVQIDNQEIQAAVHDMIHSGGKLLRPAYQLLFSY FGEQRDPKKATALAASIELLHTATLVHDDIVDEADTRRGLPTLRSRFGNSTAVYTGDYLF VCCFKLLSDYSSSLKSIQLNSRSMEKVLTGELGQMDNRYNFEVTIDQYLKNISGKTAELF ALSCFVGAYESGTSQRFAKRCGEIGENIGLAFQIIDDILDYTQTADAIGKPVLEDVRQGV YSLPLIYALEANREVLLPLLMKKEALTDEETQEIYRLVHELGGVEKAQQLATHYTEKALK EISKLPETKVQAKEQLYEITQTILTREN >gi|237663592|gb|GG668926.1| GENE 26 28488 - 29045 531 185 aa, chain - ## HITS:1 COG:lin2789 KEGG:ns NR:ns ## COG: lin2789 COG4769 # Protein_GI_number: 16801850 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 1 169 1 169 180 207 64.0 9e-54 MSKLHKNIYIAMLVAQGVIIGLIENMIPYPFAFAPGAKLGLANLITIIAIFTMRKRDSFF LVCLRLILTTLLGGTLSTFFYSASGALLSYFGMLLVKQLGPKRVSIIGISAVGGFLHNVG QLLTTSFFAHSWAPMLYLPFLSLFGLLSGIAIGIAANYLLQHVQTLRKFQLNYEQTTKHK WSQFF >gi|237663592|gb|GG668926.1| GENE 27 29057 - 29479 529 140 aa, chain - ## HITS:1 COG:L178600 KEGG:ns NR:ns ## COG: L178600 COG5341 # Protein_GI_number: 15673322 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 6 140 10 133 135 102 45.0 2e-22 MTIKEFIKKSRLKTWDVIIIAILVLGSFLPLVVFAMQNRGQEAATYQAVLKVDNKVIKVF DLKKDGPHYTYKYEAKDGDYNLIEVDGDRIRVKEANCADLVDVRRGWISKPGETPIACLP HNLFITVEASDGSEDGSLIY >gi|237663592|gb|GG668926.1| GENE 28 29695 - 31641 2098 648 aa, chain - ## HITS:1 COG:L41335 KEGG:ns NR:ns ## COG: L41335 COG1252 # Protein_GI_number: 15672811 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Lactococcus lactis # 1 648 1 666 667 717 57.0 0 MTKQNIVVVGAGYAGVSATKFLAKKFKKDTDVTITLIDRHSYHTMMTELHEVAGGRVEPE AIQYDLQRLFSRKKNVKLVTDTVTGIDKENKVVKTLAGSYPFDQLILGMGGEPNDFGTPG VKENGFTLWSFDDAVKIRHHIEATVAKAAIEPDAEVRKAMLTFVVCGSGFTGIEMVGELI DWKDRLAKDAKIDPDEITLMVVEAMPTILNMLSRNDAAKAERYLEKKNVQLLLNSPIVEV AADHIKLKDGSEVPTHTLIWTAGVKATSDAADFGLEAARGSRLVANEYMQAKGYEDKNIY IIGDLVYYEETPNTPTPQIVQAAEQTGHTAAANIVADIKGGEKHAFKGNYQGFMVSIGAK WGVANLFDKIHLSGFLAIIMKHIVNLKYFFDIRSGYYMFQYIMHEIFHIKDDRSVARGHT SRYGNVLWSVPLRVFYGMVWLVESMKKIVGNGDYLKPSTWFGDGSWFTDKVVFPFPWLQE QVTTGASQATETATTAASGAADAAASGGADAATQAAHFGLSYAYGETPMQVFDHMPKWFE SVMKFMMPNQEVALFMQKFMTIVEVCIALALIAGLFTWLSSAATIGLTIAFCLSGMFYWV NIWFIFVAFALMNGSGRAVGLDRWVIPWIQRKLGKAWYGTPKARYGGK >gi|237663592|gb|GG668926.1| GENE 29 31919 - 32848 1138 309 aa, chain + ## HITS:1 COG:lin2786 KEGG:ns NR:ns ## COG: lin2786 COG4939 # Protein_GI_number: 16801847 # Func_class: S Function unknown # Function: Major membrane immunogen, membrane-anchored lipoprotein # Organism: Listeria innocua # 1 307 1 296 299 221 50.0 1e-57 MKVNKFVKGFAAIALFSLVLAGCGADKKDNTTNSSSAASSETKKSTESSAPAKKVAGGDL KDGTYKLEEKNEKNGYRAVFEMTVKDGKITESKYDNINADGKSKTEDTKYEESMKAKSGV GPKEYIKQLNDSFVKAQSASGVEVVTGATHSSESFQNYAQQLIQAAQAGNTDTIEIDNGA TLKDGTYSLKEKNDSNGYHTTFSMTVKDGKVTESNYDNVNADGKSKKDDTEYESKMKDVT GVGPKEYIETLNKEFVKAMGEEDGSPAGVEVVTGATHSTHSFINYAQQLVNAAEKGDTTE IVVDNIVTK >gi|237663592|gb|GG668926.1| GENE 30 33103 - 34170 1211 355 aa, chain + ## HITS:1 COG:lin2785 KEGG:ns NR:ns ## COG: lin2785 COG1477 # Protein_GI_number: 16801846 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Listeria innocua # 3 340 2 348 360 376 56.0 1e-104 MKKKLLLMVSVLAVLFVAAACSSKPEAKINTEPYSDRQTMLGTYVQIRIYDDGKEDVLPK AFARVKELGDKITVNQPGSEIDEINQEAGVKPVKVSDDLYPLLKKAYEYSKDSRGGFDMA IGPITSMWHIGFDDARKPSQAEIDQALKLVDYTKVKFNDKEQTVYLEEKGMQLDLGAIAK GFITDEVVKVLKDNGVTTAIVDLGGNVYVLGHSPRGKDMDWTVGIQDPNKARNTVLGQVK ESNKTLVTSGIYERYLKVDGKTYHHLFDRETGYPFDNDIAGVTIITDKSIDGDGLSTAVF SMGVKKGLEYVESLKGTDAIFVTKDDKVYISKDIEGNFEIGKDSGYTMGNRADLK >gi|237663592|gb|GG668926.1| GENE 31 34184 - 35131 664 315 aa, chain + ## HITS:1 COG:L112353 KEGG:ns NR:ns ## COG: L112353 COG1575 # Protein_GI_number: 15673645 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Lactococcus lactis # 1 313 1 313 319 306 54.0 5e-83 MSLNVFLKVVEIQTKLASLFPFIIGVLFSMTYFGEVQWGNTLVFFIGMVVFDMATTAINN YMDFKKAKSDVYKYEENIIGQSGVSPQLVRNMIFAMIAFTAVVGAYLTVQTGWLFLVLGG ICCFIGIFYTYGPIPLSRMPLGEIFSGFTMGLGIFVLTVYLNVVTQPPFYLTVDFASGAF RLDGNLWAVLAIVVASLPLVCSIANIMLANNLRDLDTDIENHRYTLVYYIGRPAGIVLFQ VLALAGYLVILFGFISGIYQWPVLITFATLPVIWKNIQTFKQELPQPKSFRHSIKNLLVF NGTYALGLLISALIG >gi|237663592|gb|GG668926.1| GENE 32 35517 - 35879 323 120 aa, chain + ## HITS:1 COG:no KEGG:EF3076 NR:ns ## KEGG: EF3076 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 119 1 119 120 192 90.0 5e-48 MKKKRYLMIVCLLFSPSFFINVEASDGGSSSVGIEFYQNPTTPAPKDAPPKTDAPATDPK EPAGPPQGDQRSGGSTQTTTTGSTLPRTGSKSQANLSILGLVLIGLVGMVHRKRGRHEAK >gi|237663592|gb|GG668926.1| GENE 33 35866 - 38868 2536 1000 aa, chain + ## HITS:1 COG:no KEGG:EF3075 NR:ns ## KEGG: EF3075 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 266 1000 688 1426 1426 727 62.0 0 MKRNKWQRLAAIGLCSSLLVNAFSGVTAVAETVTIESSPTAESSVKEETQASSETQETMT ETSREEVTQKTEKQAEVEVEKKEDTPVKAEQKEVETLPTVRLERAVGVKEAGKVSELSTW FESESNSFPTKNQSYTVPEYRFSINIASENKTSLNMADFQLTSEMGLDTWGQSTNLSNLA SRGDKIIPVSNVPTTTGLDILIPSQTLNVNYFHYWGDMVVYYLKDPVLTVPKYIDTIEVA NSGIYNRYWPYSIAGYPYNIKLVKTNNSYTLQQPLYQVWNKYYSASFAAELRATYESKQA SLTYIAAQQDIDLTTTYKKVTENFVDATGAKITPPSGFTQGQQTSITSNDFTYTSAKALP DTYKAGGKTYKFKGWYKGKTKPATLKTTKTPSYGVTYDDNDDLNVVYEEIEAFDFPAITY QFGFVDESGKQVDASKVGLTYDNWYGEVLGTNVADWKTINLEKGQVAPTKNNLKEIVYPA QSLEIMSGRSSQYSAANLTFALPKYYEKMSVYNKSGTFDVAYPFPSVQDNNSTIPIVEGT DKSVSKWFELKKSGSQSFVFNQTTPAAPADVQVPAYLREVVYNPATVATKGTYSTLDKPV YYYLTNRKVTENFVDTTGTKITAPTGFTQGNQIPMTSDTFKYTAAKALPASYSAGGKTYT FQGWYKGKTKPNTLTTSTTPTYNTTFDGNDDMTAVYKEEVPKASVTLTRTTAETVTSGGN VTWRATITNTSQAPLTTATIKKSTAWTTGLAAPTAMIVTPVGGTAKTVPVTATTWTNGVS LGTDIPVGKSATVQFTTKATGIAGQVLRAGITTSGNYSGISASATVRVKDNDQAIVTPTT EGFISVPTFNFGQIGIAGNTQQHGLKKAADYYGNGTRNPYLRIKKTQPNWSLTAQLSQPK SATDSLPTATRLLLGAAPVSSFSNYNQPTELKNTIGTTKVINLTANNTATNIVANQQFTG SNVYQLDFVFDNIKLEVPASQGMTGQQYQAAVTWNLVTGP >gi|237663592|gb|GG668926.1| GENE 34 38820 - 39092 87 90 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKGALLTLSIAEALASTVIFYKSLKIATVLNGSTPERYVVAYLSFHCCYSTTTLKRPSIK NTRASYFSEARAFFFYGPVTKFHVTAAWYC >gi|237663592|gb|GG668926.1| GENE 35 39116 - 40732 1595 538 aa, chain - ## HITS:1 COG:BH3670 KEGG:ns NR:ns ## COG: BH3670 COG1316 # Protein_GI_number: 15616232 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 237 530 10 304 304 207 41.0 6e-53 MQTSNKKFPLYALTTLGFTFLTLLVAASPNWFQQMDEAIYHIKWQLNAPLLTAVNLLAKT ATIGPMLLFFLLLMVYLLRKKEKILAFWAVSNLLAVGFLGSVFKHVMGRARPNLGALADR SSASFPSGHSLLAMALVCTILIILAYLHVEKTKGIKIFLLTYLVLIVLGRLILRVHYPSD VIAGMLLSYSWVNFSFQIVQRYLPAPEPEEAEVPTQRRRRHSRKRKSLFVVFSLTLLFLG TLSVSAYGVSMYRNLQKTANTMYKPRKSSTKSPDLAKGEPVSFLIMGIANDSKRKTDYRS NALMVVTVNNQLQKTTITSIPRDYYVEMAGTNGEYNKINAAHVFGGADMQIKTVENVLHI PINHYFSIDMDAMKDLGDAVGGVTVDNAFAFDAEGIHYPKGKQHLGGWEALQYARMRYED PEGDYGRQRRQREVLIELTNKLLSFNSLLKYQEILDVIGEHGETDLSFDQMMAMLKKYTP ALKTIETDQLKGYDYTGDGVTGIEGISYQLVEESERQRVENAIKEQMNLSTKDTEQSQ >gi|237663592|gb|GG668926.1| GENE 36 41034 - 41168 58 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKFKKIYCFLNKFKGVGEKRYFGKSILKTEKRFTASAFNDIIKE >gi|237663592|gb|GG668926.1| GENE 37 41194 - 42489 1231 431 aa, chain + ## HITS:1 COG:alr3406 KEGG:ns NR:ns ## COG: alr3406 COG1106 # Protein_GI_number: 17230898 # Func_class: R General function prediction only # Function: Predicted ATPases # Organism: Nostoc sp. PCC 7120 # 1 416 1 443 463 109 27.0 1e-23 MLVNFTVKNLLSFKEEQTLSLQTGAYLRKYVNNRFEVKPKNYPEKLRLLKSAIVFGGNGS GKSNLVSGLNALKTLVLREQASINDALLYEPFALDPLTKQSPSVMTIEFINDSVLYRYSL ANTAREVVKESLEIYDKTQDDFVYYFKRDGAESSVFPEKYQEYQTQIKSNSLVIHTLESK NDQHATNVVRWFANQLVIFDGSLRNIERLNNEKDKEKVLNFLKLADMNMVDLVPVKDKEE DYSKQEKLDAVLERIIQEKDPTIEIGRVKKSLYSLYSVYNQYDEMNQVVGQERIHYDLES SGTKKLIGLALNILFNPEEKVFVFDEFDDAFHQELSGTLLEAFNAMETNTQFILTSHELH LMDNQLRKDQIYFTDKNYRGASELYALYDFEADPKKGRGDITYYRRYLNGLFGGVPHIDR SEIVQAVKVKE >gi|237663592|gb|GG668926.1| GENE 38 42498 - 42938 174 146 aa, chain + ## HITS:1 COG:no KEGG:EF3241 NR:ns ## KEGG: EF3241 # Name: not_defined # Def: abortive phage resistance protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 136 1 136 210 225 97.0 5e-58 MPKIKRVKKGKKLKPNVMIFCEGETEEAYLRLIKRKYSAVNIKSKLKVKTCRRQGEALVE YAVSCIRSMGKAERDNYDLFYVMNDKGEQTTESIENAVRCGQRHRPEIKTIFSNECFELW LLLHFEEVNRYMTRESSAFKRQLSKF >gi|237663592|gb|GG668926.1| GENE 39 43164 - 44156 963 330 aa, chain - ## HITS:1 COG:SPy1362_2 KEGG:ns NR:ns ## COG: SPy1362_2 COG0340 # Protein_GI_number: 15675294 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Streptococcus pyogenes M1 GAS # 81 321 2 235 240 196 43.0 8e-50 MSTKSQVLTLLMKQTPAFLSGEEMAQRLSLSRTAIWKAINELKKDGYQITSVQNKGYRLE KSDVLSAEGIQLALWPQTPPLTITVLETSESTMTDAKRAILDQTPDNTLIVADMQEMPRG RFGRPFFATPGKGIYMSMVLQPNQNFEEIAQYTVIMAVAVARAMDALAGVHTEIKWVNDL YLNGKKVCGILSEAMSNVETGQISNVIIGMGINFSITETEFPEDIRQKVTALFPDGEPTA SRNELVANIWNHFYQILDERSTKDFLEEYRQRSFVIGKDVAFTQNGQDFRGVATTINGNG ELIVQLPDGTSKTLSSGEISLDQIGEWRRG >gi|237663592|gb|GG668926.1| GENE 40 44295 - 44510 280 71 aa, chain + ## HITS:1 COG:L121994 KEGG:ns NR:ns ## COG: L121994 COG3478 # Protein_GI_number: 15672697 # Func_class: R General function prediction only # Function: Predicted nucleic-acid-binding protein containing a Zn-ribbon domain # Organism: Lactococcus lactis # 3 70 5 72 72 99 76.0 1e-21 MEKQQYVCEKCGNMHYVSDQFQATGGNFAKIFDVQNKKFITISCTQCGYTELYRSQTSGG MNVLDFLLGGG >gi|237663592|gb|GG668926.1| GENE 41 44751 - 44963 62 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLSVFYYVSSQALHPSSYKSIKTPIRKITFTLHILNICNKKHFLQFLSKKKPKIEHASEK FSGVSTFVFL >gi|237663592|gb|GG668926.1| GENE 42 44931 - 48545 849 1204 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 725 1140 906 1387 1392 331 43 2e-89 MAGHVVKYGKHRERRSFARISEVLELPNLIEIQTDSYQWFLDEGLREMFEDILPIDDFQG NLSLEFVDYELKEPKYTVEEARAHDANYSAPLHVTLRLTNRETGEIKSQEVFFGDFPLMT EMGTFIINGAERVIVSQLVRSPGVYFHGKVDKNGKEGFGSTVIPNRGAWLEMETDAKDIS YVRIDRTRKIPLTVLVRALGFGSDDTIFEIFGDSESLRNTIEKDLHKNASDSRTEEGLKD IYERLRPGEPKTADSSRSLLTARFFDPKRYDLANVGRYKVNKKLDLKTRLLNLTLAETLV DPETGEIIVEKGTVLTHQIMETLGEYIDNGLNSVTYYPSEDAVVTEPMTIQVIQVLSPKD PERIVNVIGNGYPDDSVKTVRPADIVASMSYFFNLMEDIGNVDDIDHLGNRRIRSVGELL QNQFRIGLARMERVVRERMSIQDTETLTPQQLINIRPVVASIKEFFGSSQLSQFMDQTNP LGELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAK VNKFGFIETPYRRVDRATGRVTDQVDYLTADIEDHYIVAQANSVLNEDGTFANDVVMARL QSENLEVAVDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIQPRSP WVGTGMEYKSAHDSGAALLCKHDGVVEFVDAKEIRVRRDNGALDKYMVTKFRRSNSGTSY NQRPIVHLGEKVEKGDTLADGPSMEEGEMALGQNVLVAFMTWEGYNYEDAIIMSRRLVKD DVYTSVHIEEYESEARDTKLGPEEITREIPNVGEDALKDLDEMGIIRIGAEVQDGDLLVG KVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKIFTREAGDELSPG VNMLVRVYIVQKRKIHEGDKMAGRHGNKGVVSRIMPEEDMPFLPDGTPVDIMLNPLGVPS RMNIGQVLELHLGMAARQLGIHVATPVFDGATDEDVWETVREAGMASDAKTVLYDGRTGE PFDNRISVGVMYMIKLAHMVDDKLHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE AYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQSLGLDMRV LDIEEAEIELRDMDDDDDDLITVDALTKFAEQQSAKQLEKEAESVVKEEAQDVVQEIETA EDRD >gi|237663592|gb|GG668926.1| GENE 43 48712 - 52365 4023 1217 aa, chain + ## HITS:1 COG:lin0286 KEGG:ns NR:ns ## COG: lin0286 COG0086 # Protein_GI_number: 16799363 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Listeria innocua # 1 1202 1 1201 1201 1932 79.0 0 MIDVNKFESMQIGLASPEKIRSWSYGEVKKPETINYRTLKPEREGLFCERIFGPTKDWEC ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM SPRALEEVIYFASYVVIEPGDTTLEKKQLLTEREYREKREQYGQAFKAAMGAEAVKQLLD NVDLDGEVAQLKEELKTASGQKRTRAIRRLDILEAFRASGNQPSWMVMDVIPVIPPDLRP MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPSIIVQNEKRMLQEAVDALIDNGR RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPFLKMYQCGLPKE MAIELFKPFVMRELVQREIATNIKNAKRKIERGEDEVWDILEEVIQEHPVLLNRAPTLHR LGIQAFEPVLVEGRAIRLHPLVCEAYNADFDGDQMAVHVPLNEEAQAEARMLMLAAQNIL NPKDGKPVVTPSQDMVLGNYYLTMEEEGREGEGMIFRDMNEAVLAWQNGYVHLHSRIGVQ TTLLGDKPFTDWQKERILITTVGKIIFNEIMPVEFPYLNEPTDYNLTVQTPDKYFVEAGT DIPAHIKEQELVLPFKKKNLGNIIAEVFKRFHITETSKMLDRMKDLGYKHSTYAGMTVGI ADIMVLHEKQAIIDAAHKQVETITKQFRRGLITDDERYERVIGVWNGAKDEIQQKLIESM EARNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGRIMELPIISNFREGLSVLEMFIST HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLEIEAIREGNEIIEPLD ERLLGRYTRKSVVHPETGAIIIGADQLITEDLAREIVDAGIEKVTIRSVFTCNTKHGVCK HCYGRNLATGSDVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF EARNPKGQAVITEVTGEVIDISEDPATRQKEVTIKGKTDTRTYTVPYTARMKVAEGDIIH RGAPLTEGSIDPKQLLQVRDVLSVENYLLREVQRVYRMQGVEIGDKHIEVMVRQMLRKIR VMDPGDTEILPGTLMDIAEFKDRNYDTLVAGGVPATSRPVLLGITKASLETNSFLSAASF QETTRVLTDAAIRGKKDPLLGLKENVIIGKIIPAGTGMARYRNMEPKEVGVASENVYSIS DIEAQMAAEDAMKNINK >gi|237663592|gb|GG668926.1| GENE 44 52414 - 53106 354 230 aa, chain - ## HITS:1 COG:aq_1601 KEGG:ns NR:ns ## COG: aq_1601 COG1989 # Protein_GI_number: 15606720 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Aquifex aeolicus # 3 223 7 236 254 88 30.0 1e-17 MFFLSLFLIGACFGSFLCLVAERLPVGRSLWWPPSHCQGCHQPLQLYELIPVVSILLQRF RCRKCQQPVAKSYLLAELVMGGLTASCFSAGLKIDALILWWWLTSAFTLSLIDYWYLVVE PKILYPSFFVLYLLKVAGQHSFYLLTGLFCFCFFRAVLHYFPEAMGRGDLLLLGLWGCFL QVPQLLMLLFFASSYGLICGYSCKFLGYPVEQKLPFVPFLSLGLLTISWL >gi|237663592|gb|GG668926.1| GENE 45 53215 - 54735 1380 506 aa, chain + ## HITS:1 COG:BS_gntK KEGG:ns NR:ns ## COG: BS_gntK COG1070 # Protein_GI_number: 16081058 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Bacillus subtilis # 1 506 1 507 513 414 41.0 1e-115 MEKLAIGVDVGTTQAKAVAFQANGTVVASSYVRYPLIQETEGMAEQDPETLFQAVVNCIR TVTQQVKNQPIGLISFASAMHGLIAMDAQGRPLTQVITWADTRAADYAEALKETPAAQLF YQLTGMPIHPMAPLYKIRWLQENQPAVAQSAAKFIGIKDYIFYRFFGEYWTDYSSASGMG LFNIHTRQWESSILAYLSIEEEQLPKVAPSTFIFPALAPSWQEMLGVEEETVLVLGGADG PLSNLGLGALGMGVATLTVGTSGALRYIVEEPFLHPQGETFCFALDEQHWVIGGASSNGA VALDWASQTIFAEERQQAIQNGTNFYDPIMAKIATVPAGANGLLFHPYLLGERAPLWNAE ASASFLGLRKNHHAGHLARAVVEGICFNLKTILEDLKQLGGPVQEIRATGGFADSPVFRQ IMADVLGETLSFTDSTEASALGAVLLGWQGLGQLPNLQAAAQQVLIHETVTPRADQLLVY QELYPVFQETQQVLAQSYQKLAEFRK >gi|237663592|gb|GG668926.1| GENE 46 54819 - 55538 607 239 aa, chain + ## HITS:1 COG:no KEGG:EF3234 NR:ns ## KEGG: EF3234 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 239 1 239 239 335 97.0 1e-90 MKKQLLPLFLLFIGALASCSAPSRSGEKAAQQLVDYFIYQEKTATFSQTFREPKVLAEHL QTSRQQFQKQFFNSLKEMNAEVTETEAQKLSAELLAQVKKKASYQLVATKELNGQATITF QIKGLDFVTAIEDTTTALLQQTQQATQALDMQHTLAVLKKEIQQINVSHEPVELPLTVKQ VEGQWYLPAAEQLRLNQFFLAFVTGKEDTDQLTEALDTILTQAEQKVVTADEKTAISGN >gi|237663592|gb|GG668926.1| GENE 47 55666 - 56133 557 155 aa, chain + ## HITS:1 COG:SPy1531 KEGG:ns NR:ns ## COG: SPy1531 COG0783 # Protein_GI_number: 15675430 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Streptococcus pyogenes M1 GAS # 2 153 24 175 175 174 51.0 8e-44 MKFEKTKEILNQLVADLSQFSVVIHQTHWYMRGPEFLTLHPQMDEYMDQINEQLDVVSER LITLDGSPFSTLREFAENTKIEDEIGNWDRTIPERMEKLVAGYRYLADLYAKGIEVSGEE GDDCTQDIFIANKTDIEKNIWMLQAKLGKAPGIDA >gi|237663592|gb|GG668926.1| GENE 48 56253 - 56798 930 181 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227517177|ref|ZP_03947226.1| ribosomal protein L13 [Enterococcus faecalis TX0104] # 1 181 1 181 181 362 99 7e-99 MIEGKILNGIVCPTMSPGNSSVCQTSKTKLEERNVRTTYMAKAGEVERKWYVVDATDVPL GRLSAVVASVLRGKNKPTFTPHVDTGDFVIVINADKVKLTGKKATDKIYYRHSMYPGGLK SVTAGELRDKNSRRLIETSVKGMLPKNTLGRKQFTKLNVYGGAEHPHAAQQPEVLDITNL I >gi|237663592|gb|GG668926.1| GENE 49 56812 - 57204 653 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29377675|ref|NP_816829.1| 30S ribosomal protein S9 [Enterococcus faecalis V583] # 1 130 1 130 130 256 99 9e-67 MAQVQYSGTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLREVINQPFGVTETKGA YDVIVNVNGGGYAGQSGAIRHGIARALLQVDPDFRSALKRAGLLTRDARMVERKKPGLKK ARKASQFSKR >gi|237663592|gb|GG668926.1| GENE 50 57870 - 58355 410 161 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517179|ref|ZP_03947228.1| ## NR: gi|227517179|ref|ZP_03947228.1| hypothetical protein HMPREF0348_0162 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0162 [Enterococcus faecalis TX0104] # 1 161 2 162 162 285 100.0 6e-76 MKYGKIFKKLYEQNYNFKLVPYDCAPSNYSELIKKQKQEGFRQVLFNVELMLDLVKAVYI YPDLYLQKIKMCSDAEENVQSEIDDLVIESRSNRELIFRIIDELEWYSDRESIDIFEIHF YDKETSSKTVLKSNGIVYGDEIDSLFKQFIYPQLMRYFDEG >gi|237663592|gb|GG668926.1| GENE 51 58546 - 58971 124 141 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517180|ref|ZP_03947229.1| ## NR: gi|227517180|ref|ZP_03947229.1| hypothetical protein HMPREF0348_0163 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0163 [Enterococcus faecalis TX0104] # 1 141 68 208 208 247 100.0 2e-64 MNVTVSVKSGSQESNKLYISNDDVDEEKTIDVVVNIDVSGKKRFCKKNIMIKCPTSYILQ LEKRKNVSFIKEITTSEEYEIDLNEMLSKSPEFDISFSREIHFSLLLEEHNRGNKDELRF EREKNWGLISINSNGLKLIQK >gi|237663592|gb|GG668926.1| GENE 52 58987 - 59904 407 305 aa, chain + ## HITS:1 COG:no KEGG:CLD_2076 NR:ns ## KEGG: CLD_2076 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B1 # Pathway: not_defined # 4 302 5 302 306 104 27.0 5e-21 MAYSKWVDNTDNSLESLIDKFLINREGTLDPFSNETLLHKVDLAFDDNQTFKIDEKVVTY NYLVYQYEYIRKNEITNPIREKRVGLYVADIIIFNYNFKNYYIVDKGYTTPTLGNLRTLA GYSGKMEISEQRIIGIKTDLFIWMIHHLLDNPNSFLNDQNNTKVESVIGFKGSTADKLAE ISGSGEKIMKMLTTLLFLFENQKISKVETTVFRKDERFKLTLGEKSLVEIDFNSFEGEDF FVGKEELKSKVAIKVFVDVIPNLISIFSDEIDSKKWSMRKEEKFFKDIGRDLSRKINEKL RTKNK >gi|237663592|gb|GG668926.1| GENE 53 60244 - 60408 96 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227517182|ref|ZP_03947231.1| ## NR: gi|227517182|ref|ZP_03947231.1| hypothetical protein HMPREF0348_0165 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0165 [Enterococcus faecalis TX0104] # 1 54 1 54 54 69 100.0 8e-11 MMNSKKKEIAAIKMRKSTKKKCIICVSALFVMSILAEIGINYSLGKKDKHIVSM >gi|237663592|gb|GG668926.1| GENE 54 60653 - 61069 414 138 aa, chain + ## HITS:1 COG:Cgl1127 KEGG:ns NR:ns ## COG: Cgl1127 COG0494 # Protein_GI_number: 19552377 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 1 130 1 129 131 141 55.0 4e-34 MKKEIHVVGAIIVENGKVLCCQRGPERALANLWEFPGGKIENGETKVQALERELQEELKI EVTIVKEEYAFCRYEYDFGFVNLTTFICYLESGEPQLTEHLQIKWLTPNELNQLEWAPAD IPTVEKLVEKGVGTEQNG >gi|237663592|gb|GG668926.1| GENE 55 61062 - 63947 2596 961 aa, chain + ## HITS:1 COG:Cgl1126_2 KEGG:ns NR:ns ## COG: Cgl1126_2 COG1061 # Protein_GI_number: 19552376 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Corynebacterium glutamicum # 194 961 10 789 789 540 39.0 1e-153 MDNLELALQKAFINKEALGDDLTPKFIVNNPKKHDYLLNTLSKDLKSCKTFFIAVAFITP SGLNAIKTQLADLALRGISGKILTSTYLNFNDPHVFRALLNIPNVEVRVSKKEGFHSKGY LFEMEDYQSFVIGSSNLTMSALKLNYEWNVRLTSRENGEMVSSIQKHLIQEWHEAQSLTL EWVDAFEKNYHPIVNRKMLVQDVSENECLDTQYILPNSMQKEALRSLKALRETGATKGMI VSATGTGKTYLAAFDVQQFHPKRVLFIVHSELILMKALESFKLILGGKDDDYGVLSGNSK NFDAKYLFGTIQTVSKSEYQERLGKEAFDYILIDEVHKAGAKSYIKAIEFFNPKFLLGMT ATPERTDNFNIFELFDYNVAYEIRLQAALELELLCPFYYFGVTDYEKDGEIIDETTDLKR LLQEERVDFLIKKINYYGYSGDSPRGLVFCSRKDEARQLAEMFNDRGIPSAYLSGDHNFD KREKEIKRLDTGEIHYIFTVDIFNEGIDIPKVNQVIMLRNTQSSIIFIQQLGRGLRKDPS KEFVTVIDFIGNYKNNYMIPMALSGDSSQTKNSLRRDTIDVTYISGLSSINFEKVARERI FKSIDQAKLDAMSELKASYFKLKNRLNRVPYLNDFQVLDGVDPLLIIGKEKTYYNFLERI GEAEAKLSEEENSALKFVSVELLSGIRPHELYVIEEFLMTDKEQLSLEEITALFDTFNLT YTTDTLASVVKVLDLSFYESTIRKRYLLSQMFKMKENCLQITEKFREFKKNSYFINLMLD VIHTGINKSMEYDLSQPLNLYKKYRRKDVLRLLNMNFNQNEQSIGGYTNSNNHFAIFVTL DKGKDFKAARIAYEDEFIDERTFHWYTKAPRNLRSPEVQLLRNPGEYKFHLFVKRKYNQK ENETDFYYLGEVAPLQETIQQVEKQDKEGKKKSVVKLDFTLETPVEPNMYEFLTQSIRTN E >gi|237663592|gb|GG668926.1| GENE 56 64246 - 65181 962 311 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 301 1 303 311 375 65 1e-102 MTDALVIQDLRKVYASGVEALRGIDLTVEEGDFYALLGPNGAGKSTTIGIVTSLVNKTSG KVKIFGYDLDTEIVRAKQQIGLVPQEFNFNPFETVQQIVVNQAGYYGVSRKEAMKRSEKY LKQSNLWEKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRREMWAFLQ ELNAQGTTIILTTHYLEEAEMLCRNIGIIQSGELIENTSMKHLLAKLQFETFIFDLAPYT QAPVIEGYQSVFEDELTLAVEVERNQGVNHLFEQLSQQGIKVLSMRNKSNRLEELFLKIT EDTYQREDQHV >gi|237663592|gb|GG668926.1| GENE 57 65174 - 65944 772 256 aa, chain + ## HITS:1 COG:lin0673 KEGG:ns NR:ns ## COG: lin0673 COG0842 # Protein_GI_number: 16799748 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Listeria innocua # 1 256 1 256 256 373 84.0 1e-103 MFSLYFTALKSLAVKETNRYLRIWVQTLVPPVITTSLYFVIFGKMIGGRIGDMGGFSYME FIVPGLIMMSAITSSYANVSSSFFSQKFQKNIEEILVAPVPTHVIIWGFVIGGVGRSILV GALVTIISLFFVPLHVVSWLMVIMTLLMTAILFSLAGLLNGIFAQSYDDVSIVPTFVLQP LTYLGGVFYAISMLPPFWQAVSKVNPIVYMISGFRYGFLGVQDVPIGISMTILILFIVVL YGICWYLVETGRGLRS >gi|237663592|gb|GG668926.1| GENE 58 66133 - 67107 1141 324 aa, chain + ## HITS:1 COG:BS_yfjN KEGG:ns NR:ns ## COG: BS_yfjN COG0042 # Protein_GI_number: 16077870 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Bacillus subtilis # 1 320 1 320 325 489 76.0 1e-138 MSKNFWATLPKPFFVLAPMEDVTDVVFRHVVKEAGAPDVFFTEFTNSDSYCHPAGKDSVR GRLVFTEDEQPMVAHIWGDKPEFFREMSIGVAEMGFQGLDINMGCPVPNVAERGKGSGLI LRPEVAAELIDAAKAGGLPVSVKTRIGFTEMAEMEAWITHLLEQDIANLSIHLRTRKEMS KVDAHWEVIPQIMAIRDRVAPQTTITINGDIPDRQKGLELAEQYGVDGIMIGRGIFKNPY AFEKEPKTHTPQELLGLLRLQLDLQDKYAELVPRSIVGLHRFFKIYVKGFPGASDLRAQL MNTKSTDEVRQLLATFEAEHGVLD >gi|237663592|gb|GG668926.1| GENE 59 67428 - 68963 1344 511 aa, chain - ## HITS:1 COG:SPy0714_1 KEGG:ns NR:ns ## COG: SPy0714_1 COG0803 # Protein_GI_number: 15674772 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Streptococcus pyogenes M1 GAS # 1 319 1 322 322 323 52.0 6e-88 MKKFTLPLLAALSLILFGACGRTNTSDKTADGKEKLSIVTTFYPMYDFTKNIVGDEGDVK LLIPAGSEPHDYEPSAKDMATIHDADVFVYHNENMESWVPKAAKGWKKGAPNVIKGTENM VLLPGSDEDGHDHDHEHGEEGHHHELDPHTWVSPHRAIQEVTNIKEQLVKLYPKKAKTFE TNAEKYLTKLTALDKEFQTALKDAKQKSFVTQHAAFGYLALDYGLKQVPIAGLTPEQEPT AGRLAELKKYVTDNQIRYIYFEKNANDKIAKTLADEANVQLEVLNPLESLTQKQMDNGED YLSVMKENLTALKKTTDTAGKEVQPETSEKTEKTVANGYFKDSEVAERTLADYAGNWQSV YPLLKDGTLDQVFDYKAKLKKDKTPAEYKTYYDAGYQTDVDHINITDSTIEFLVDGKPQK FTYKAAGYKILNYAKGNRGVRFLFETDDANAGRFKYVQFSDHNIAPTKAAHFHIFFGGDS QESLFNEIDNWPTYYPSDLSKQEIAQEMIAH >gi|237663592|gb|GG668926.1| GENE 60 68984 - 69106 181 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKTDLSSAYRRLKSPNIKTRKRALKIIKEHKRNKQKKIA >gi|237663592|gb|GG668926.1| GENE 61 69141 - 70115 1056 324 aa, chain - ## HITS:1 COG:all1751 KEGG:ns NR:ns ## COG: all1751 COG0523 # Protein_GI_number: 17229243 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Nostoc sp. PCC 7120 # 3 315 10 318 323 163 30.0 3e-40 MGIPITIVSGFLGAGKTTLINHALAQSPFPKEEIIIIENEFGQTGVDHALLLQTTERIIQ LNNGCMCCSLRGDLLASLSAILEVYQEEQQTVAQVILETTGIADPQPIIQTILTTPHIKN HFYIDSLLTVVDGHHWQQQLQETEAIKQLALADRLFFSVKEPADITQLPTFQETLRTINP FADILSFQANEPLLASDFFQLNKFTATLTEHEMTHSPHEHAHEHHHHTFHSLTLTASSAL NEPLFTRWLDWLMYTHQEKLYRFKGILALQEHDLAIAMQGVNQQVAFQMTNQPPQETTIV LIGKELETKKIQETFQTLNKIATP >gi|237663592|gb|GG668926.1| GENE 62 70131 - 70280 247 49 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|29377651|ref|NP_816805.1| 50S ribosomal protein L33 [Enterococcus faecalis V583] # 1 49 1 49 49 99 100 1e-19 MRQTITLACAETGERLYLTSKNKRNTPEKLQLKKYSPKLRRRALFTEVK >gi|237663592|gb|GG668926.1| GENE 63 70391 - 70660 457 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|29377650|ref|NP_816804.1| 30S ribosomal protein S14 [Enterococcus faecalis V583] # 1 89 1 89 89 180 100 5e-44 MAKKSKIAKAKKQQAMIAKYAPIRQALKEAGDYEGLSKLPKDAHPSRLKLRDQTDGRPRG YMRKFGMSRIRFRELAHQGLIPGVKKASW >gi|237663592|gb|GG668926.1| GENE 64 70867 - 71259 378 130 aa, chain + ## HITS:1 COG:lin0902 KEGG:ns NR:ns ## COG: lin0902 COG1765 # Protein_GI_number: 16799975 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Listeria innocua # 5 129 1 126 126 83 35.0 1e-16 MVERLTIIRGVEKFELQTKTAHWVLAKEEGYSPVQMLVSAIGACGGYVYQSVLENSHIPF EFEKIEVTYSREVERRAQPLKQVTILFYVTVPEAFQERATRCLKLVSPNCPVIQSLAERI TVEETVVFKK >gi|237663592|gb|GG668926.1| GENE 65 71622 - 72344 367 240 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 227 1 230 245 145 36 1e-33 MIELVNVSKVYQETHALKNIHFSVQPGEIVGIVGKSGSGKSTLLRLLNLMEQPSEGEIRI DGRNVQTFSKKEVRQQQQQMGMVFQHYNLLENLKIYDNVALPLKLLKEKQPEKIERLLTF VDMAHKAEAYPAQLSGGEKQRVSIARALSRNPKWLLCDEATSSLDEENTESVVRLLHKTH QEFRPTIFFVSHELETVKRLCNRILVMEKGQLIGEFLNNPQQYEEEPLSYLEKVERSLRP >gi|237663592|gb|GG668926.1| GENE 66 72341 - 73012 731 223 aa, chain + ## HITS:1 COG:STM0512 KEGG:ns NR:ns ## COG: STM0512 COG2011 # Protein_GI_number: 16763892 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Salmonella typhimurium LT2 # 12 222 6 216 219 120 42.0 3e-27 MTFSETFAEYWPSMLVGLKETGIMMSISMAICLLVGLPLGLGLFLANPKVKGHQPWLYWV LNFIVTVIRSFPYLLFVIALIPVTRSVLGKAFGPIPSSVPLSIVAIAIFARLVEQVLLDV PEEIYFLANSLGTSKVQYIWHFLLVEARSGLVLAYTTTTVSMVSYSTVMGVVGGGGIGDF AVRVGYQRYEYGIMYVAIVIMIALVFILQMLGNFIAQKLDKRK >gi|237663592|gb|GG668926.1| GENE 67 73025 - 73843 1139 272 aa, chain + ## HITS:1 COG:Cj0772c KEGG:ns NR:ns ## COG: Cj0772c COG1464 # Protein_GI_number: 15792110 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Campylobacter jejuni # 34 272 24 257 257 142 38.0 8e-34 MKKFYLATFAVIATVILAACGGNKQADQKKDKEITVAVQLESSKDILEIAKKEAEKKGYK INIMEVSDNVAYNDAVQHDEADANFAQHEPFMEMFNKEKKADLVAVQPIYYFAGGFYSKE YQDAKDLPENAKVGIPSDPTNEGRALAILNANGVIKLKEGVGFNGTVADVVENPKNITFE SIDLLNLAKAYDEKDIAMVFCYPAYLEPAGLTTKDAILLEDEEASKHYALQVVTRKGEKD SEKIKVLKEAMTTKEVAEYIKKNSKGANIPAF >gi|237663592|gb|GG668926.1| GENE 68 73935 - 75704 1721 589 aa, chain + ## HITS:1 COG:SA0250 KEGG:ns NR:ns ## COG: SA0250 COG3275 # Protein_GI_number: 15925963 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Staphylococcus aureus N315 # 1 582 1 582 584 623 55.0 1e-178 MVELFILMMERVGLIILLAFLLVNVPYFKRVLLSREKMSSKVQLILIFGLFAIISNFTGI EIAKNQIVPNNLLTYLSSNASIANTRTLVIGVSGLVGGPIVGSTVGLIAGFHRVIQGGGH SFFYVPASLIVGLIAGFLGSRMAKQTVFPSAGFSAIVGACMEMIQMIFIFFFSGDLADGA TLVRFIALPMILLNSVGTFIFMSILTTTLKQEEQAKAVQTHDVLELAAETLPYFREGLNK NSSKKVAEIIKHYTKVSAISMTNSHQILAHVGAGSDHHIPELEVITELSREVLRTGQMTI AHAKEEVGCSDPNCPLQAAIVIPLFSHQQIVGTLKMYFTDPAQLTHVEEQLAEGLGTIFS SQIELGEAEVQSKLLKEAEIKSLQAQVNPHFFFNAINTISALMRKDSEKARKLLLQLSKY FRGNLQGAVQTTIPVSQELEQVKAYLSLEQARFPNRYQVTFDVEEAVASEKVPPYAIQVL VENTIKHAFGSRKENNQVRVVVKAKQHKLHVDVYDNGQGIPEERRLLLGKTTVASEKGTG TALENLSRRMANLYGSEGCFLIENLETGGSHVHLEIPMEQEELDARINR >gi|237663592|gb|GG668926.1| GENE 69 75685 - 76413 705 242 aa, chain + ## HITS:1 COG:BS_lytT KEGG:ns NR:ns ## COG: BS_lytT COG3279 # Protein_GI_number: 16079944 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Bacillus subtilis # 1 239 2 239 241 201 45.0 7e-52 MHVLIVDDEPLAREELSYLVSQHPQVTSVAEADSVVEAMEEMMDQKPDLLFLDIHLTDES GFDLAEKLTHLKKAPYLVFATAYDQYALKAFQVNAKDYILKPFEEEKITQVIEKASKEMA QAVPENTAEKEPKSEAIPIQGEDRIYLVAPEDIYLVSVEERQLSIFVDQQVYKMTGTLNS IEQKLPAALFIKTHRSFILNRTKIQEIQPWFNNTLQVILTNGSKVPVSRSYVKEFKEKLG LS >gi|237663592|gb|GG668926.1| GENE 70 76565 - 76984 480 139 aa, chain + ## HITS:1 COG:BS_ysbA KEGG:ns NR:ns ## COG: BS_ysbA COG1380 # Protein_GI_number: 16079943 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Bacillus subtilis # 3 134 4 135 146 112 58.0 3e-25 MEKKVYSFLQQAAVFAIIMLIANGLAFISPIPMPASVIGMVLLFIGLCTKVVKLEQVEGL GNSLSTVITFLFVPSGISLVNSLGIMQQFGVQIVFVILVATLALLATTGWTGAFLLHMKD ARKEKEPAATKKAKGEVRA >gi|237663592|gb|GG668926.1| GENE 71 76981 - 77664 1018 227 aa, chain + ## HITS:1 COG:BS_ysbB KEGG:ns NR:ns ## COG: BS_ysbB COG1346 # Protein_GI_number: 16079942 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Bacillus subtilis # 1 226 5 230 231 241 66.0 8e-64 MNPYVGIIISLAVFGIGTWLFKKSKGFFLFTPLFVAMILGVVVLKVTGISYEQYNEGGKY ISFFLEPATVAFAIPLYKKRDVLKKYWLEILTALTIGSFGSLVAVYFAGKVIGMDNHLVA SILPQAATTAIAVPISQTVGGIASITAFTVIFNGVLTYALGRIALKWFKINNPIAKGLAL GAAGHALGVAVGMEMGETEAAMASISVVVVGVVTVLVVPFFATVIGL >gi|237663592|gb|GG668926.1| GENE 72 77876 - 78421 633 181 aa, chain - ## HITS:1 COG:BS_yueJ KEGG:ns NR:ns ## COG: BS_yueJ COG1335 # Protein_GI_number: 16080227 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Bacillus subtilis # 2 180 3 181 183 239 60.0 1e-63 MKALISIDYTNDFVATDGKLTTGAAGQAIETALVQQTKHYFDNGDFVVFAIDGHDPLDHY HPENKLFPPHNVLGTDGRNLFGSLADFYQAHKNEATVYWMDKRHYSAFSGTDLDIRLRER GITELCLTGVCTDICVLHTAVDAYNLGYQLMIPERAVASFDEQGHEWALRHFKQTLGATI L >gi|237663592|gb|GG668926.1| GENE 73 78587 - 79600 916 337 aa, chain + ## HITS:1 COG:SA0610 KEGG:ns NR:ns ## COG: SA0610 COG0657 # Protein_GI_number: 15926332 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Staphylococcus aureus N315 # 60 334 50 318 347 150 30.0 3e-36 MKRKIVRFILWLLGILVVICLGVFLAFQLSPKPGAWVINQLFAGEVEIKDSASYDKALPN VQLQENQTYPSSRKKNTFDLYYPQASKQAVPVVLWVHGGGYVGGDKSGMKEFATRLVADS SVAFISMNYELAPDAPYPSQLQQVDELVQFLLEKKQAYPMLDLSKLFIGGDSAGAQIALQ YATVQTNTNYAKELGMTAALPANHLKGTLSYCGPVDLKQMANQQSDNRFMKFFVKTVAWS LLGTKDWQTSAELQEVSLVDKVTKEFPPTYLTDGNSFSFQEQGLALVQRLKTLNVPVSAL FFKDKKATITHEYQFDYQTKEAKQCYQETVQFVNTYK >gi|237663592|gb|GG668926.1| GENE 74 79977 - 82499 2229 840 aa, chain + ## HITS:1 COG:no KEGG:EF3188 NR:ns ## KEGG: EF3188 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 63 797 1 735 1554 1207 98.0 0 MKKKIAVLLATCLLVQPFLSVSAWAIEEEQQTERTQTQPKTAETSTSEATKESSAHSAEQ SSMTESSAITEKVTTSSTETKPSEEQKQITLTFETTDQALFLNDAKSYQVVKEKNQPLRT EELPKWANNEENATFVGWSYQGKTYTNEELLQLEFSEDTQLTAVFKQKLTRMARAISVDQ SIADTIAPADKTKVIVVPSPAGDGAAYKEYASTEAGLKEALFDLYQQGNNGDFTLYIGNN ITTSAATTAKVIPDTVTASNMTFYALQGKVNHLVITGNSADPISMDQTAPTGSKTLGFNQ NIFFGSNITLRNLNYTGTNMYLNGYSLNLNGGSSGNGLTVYGGTDTGDVSGNPTLTVNST GTGTWNFYGGNQNGGNLAGNPTIVINNTRSGLNTLSGGANIGTVTGNTSLVVNDSGGRIA SIYGGGYGTNATNTANVTGNVSTKVAITNAATGFQLSTYYGGVQYGNIGGKVTNDISGYG RWYTAGQRFIGGSSRGDIGTNRATDGITTNLNTQLYSAGRADFEGGNQYSGTIIGNITNV VTAGTNTAGGINDFNGGAGNNVSKFNKSQIGASNEATYDAYTPQQRAELAKSAAAFKVFG NISSKLVSGSFNNGAIYSTAAGRGGYIEGNTTIEVGTANGDGSLGGDGMAYSGAKPTSLD YSTTNKSRGYNSGWDIVGGGGYPASNDTWDIYIKGDTKTVLNNTIARWTYGGSFSGVVEG NTSNTLNGGIADTLEGTGYQAARVYGNGQTIVNNGQVDWFLSGGGWNDAKNVGNVGVTVY EGVINASMGASYGASGAIQLLVIQTIASTEEISQELLGQARTVFQVVLPMRAHFLEMPNS >gi|237663592|gb|GG668926.1| GENE 75 82532 - 84826 2678 764 aa, chain + ## HITS:1 COG:no KEGG:EF3188 NR:ns ## KEGG: EF3188 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 764 791 1554 1554 1307 98.0 0 MPGNTYITGGRPYGQNTTLGTDESNTITLNIFTKTGVESLNGASIYGDGGTNAAYTKNGK ITMNIQAAGSSIGNLYATQYSNISGGKILRDVTANVQGAVSINGLSGGSSTDNFTNAIVN ASSNKVAFNFGTNVDGTNNYQTEPLNATGLGVVNFTELNVTNGIKLMANGGNIKNGVSAT AANHSTTYNEFGSIHLSKNAGIGITNTANLISASKLTVQDHATLETIPGTGKVNIADFEA VDPTKDELLWIKPTTDTTALVDSTGTWFGNVKAYQVLTINPTVNNATKLTPTTFHGIEKA TGKTFIGDNDVTKGANGYGIAIPGSIIDYEVENPGIVAGAGTISHDVKEVKAGNAPLTLQ AWGTEVAGQKVQKGRLMIPTSSTLTPTLSFLPDEVTGSWLHQGTVKSSEVGSTIEQIPEQ KDTTPLSWKATNTNYSYQVKVQFSNKVELSGQSVIVTEDEAAQLTTVDKVIEMLGAKGRP FFKTSLKETDLPQIQAPLAEKTVSRTHDIQLEAGTSGDNLQNKTVHLVVVKNESVLAKDR SFALYATSAHLKLKEANGLTNSDELAQWTQATVIFADGRANQTPSLDAATFQAIQQAKPE ELAKTVPANYQFTEAGETLNKKINVSISGELTLEKVPKTIDFGKQKISAKPEVYWPTLSD DLVVQDTRGTESTPWKLNVQVTNPLTNGTDQLEDLSLVTDKGEFLLNKGDTVVTENEGSG SGSYTINQDWGAANQRGLKLSVPVEKQKVGEFKGTLSWSLVMAP >gi|237663592|gb|GG668926.1| GENE 76 84846 - 85235 186 129 aa, chain + ## HITS:1 COG:no KEGG:EF3187 NR:ns ## KEGG: EF3187 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 129 1 129 129 211 99.0 1e-53 MKKYLLLSCFLGLFSFCHSDTAFGEAAYENSGVVSFYGTYEYPTEESTTATSNSSTTTEP TKPADGGASSVLSSGVYGSRQGRLPATGTTNQGPFIYLGISLITIGILFIKRRREDEKNS ISSSRDCRI >gi|237663592|gb|GG668926.1| GENE 77 85192 - 85926 1037 244 aa, chain + ## HITS:1 COG:no KEGG:EF3186 NR:ns ## KEGG: EF3186 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 244 1 244 244 405 99.0 1e-111 MKKTVLAVVGIVGFSGVLATQQAFAEDINVNYTSNGAITFEPDTDPTKPVNPTNPDEKVE PEDPTDPTGPKPGTAGPLSIDYASSFQFGAQKITSDTKDYYAQIQTFKDGTTGPNYVQVT DKRGTQEGWTLSAVQNAQFKTAQNEELVGAALSIANAGVTSIVDAAYAPTPTAAHTFVPG TEVELVKAEDGKGMGTWVYRFGKDATEGATAVKLNVPGKAIKLAKEYRTTLTWTLKSVPT NVGG >gi|237663592|gb|GG668926.1| GENE 78 85931 - 86731 992 266 aa, chain + ## HITS:1 COG:no KEGG:EF3185 NR:ns ## KEGG: EF3185 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 266 1 266 266 456 99.0 1e-127 MKKTVVYSLLFGTMLLGATVPAEAATVVFDSEQSIVFTPSTDGTDPVNPENPDPEKPVRP VDPTNPDGPNPGTPGPLSIDYASSLDFGSNEISNKDQTYFARAQTYKNPDGSASELATAN YVQVSDLRGTNAGWVLKVKQNGQFRNAETLHKELTGATVAFAEPSVRSNATDVLPPTATA NIQLDAAGAETVVMQAPEKTGAGTWITLWGQAEKVTEKNQQGQQVNATITRAISLTVPGK TPKDAVQYKTTLTWLLSDVPVNNGGK >gi|237663592|gb|GG668926.1| GENE 79 86732 - 87490 1048 252 aa, chain + ## HITS:1 COG:no KEGG:EF3184 NR:ns ## KEGG: EF3184 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 252 1 252 252 366 99.0 1e-100 MKKTKVMTLMATTTLGALALVPMSALAVDGGEYQTNGAIQFAPNTNPTNPVDPTNPDPDK PITPVDPTDPTGPKPGTAGPLSIDYASSLSFGEQTITSKNMTYYAETQKYKDNAGADQEG PNFVQVSDNRGTETGWTLKVKQNGQFKTEANQELTAAKVTLSNGRVVSASQSAKPTTAPA TIELNPTGAESVVMAAGDKEGAGTYLMSWGDSVDAAKTSISLEVPGSTTKYAKKYTTTFT WTLTDTPANTGN >gi|237663592|gb|GG668926.1| GENE 80 87603 - 88679 1029 358 aa, chain + ## HITS:1 COG:no KEGG:EF3183 NR:ns ## KEGG: EF3183 # Name: not_defined # Def: cell wall surface anchor family protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 358 1 358 358 635 99.0 0 MNRWKVYATVIACMLFGWIGVEAHASEFNFAVTPTIPENQVDKSKTYFDLKMAPGAKQTV EIQLRNDTDEDITIENTVNSATTNLNGVVEYGQNGIKPDKTLRFNLKDYVEAPKEIILPK HSQKTLPLTITMPKDSFDGVMAGGITLKEKKKETTTSADQSKGLAINNEYSYVVAIILQQ NETKVQPDLKLLGVKPGQVNARNVINVSLQNPQAAYLNQLHLINTVSKGGETLYQSDTED MQVAPNSNFSYPISLKGERLTPGKYVLKSTAYGVKDEKGTYQVKGANGEERYLYKWEFTK EFTISGDVAKELNEKDVTIKGTNWWLYLLIAFIILALLLLIFFLYRKKKKEEEQQSEQ >gi|237663592|gb|GG668926.1| GENE 81 88781 - 89266 521 161 aa, chain + ## HITS:1 COG:no KEGG:EF3182 NR:ns ## KEGG: EF3182 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 161 1 161 161 219 100.0 3e-56 MRKKYLFLFSSLLIFTAVEIEPIQTLATPIYNPLEPTEEIQPKPESITPQEKSEPEQPAP TPPEDQKTTVPSEEKKPSPKKKDKPVEKPAMSKEKKKQTKETTAHPLQVNKDFVFPNGLG AGGDEESESYLAAVGYFLSGNGLYGKKMDVREVYDIDDVFK >gi|237663592|gb|GG668926.1| GENE 82 89250 - 90716 1069 488 aa, chain + ## HITS:1 COG:no KEGG:EF3181 NR:ns ## KEGG: EF3181 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 480 1 480 483 863 98.0 0 MMFLNKVDKRKIALFQLLENAPMLTESKETVMQELELSEFIVNKTVAELNADFIEFGLSE DFQIVSDGIFLTLNESGTETSATLIDCYIKESLRFAMFQDFFFQRFDSVNEFALEHFVSH TLAYKEFKELKKMLENYQITINKEFHLVGNETNLREVTTLVFLQLYQRDFSLYGKKVLEQ IRNFELFFSEKVHLNQRAGYAQAKCFHFLAVSLVRTQQQFYVEKKVDSQVLKQLAGDNQQ NVFNWLESLQIPEPQRTNEGNYLLLFLIAEEWLQVASAALCQRFAEIQQLNRDLLSYLKL QFQLSEEVLRGFEQKVTIVHFKLFHFPIEANYSYRKMDITYFAETYTEYFSASRQFIQEQ KTNPVVWDARQFLFYRYLLLMVDALPLKKVLAPITLCVDFSFGEAYNRMIQKNIEKITEW NIIFKAHVDESVQLILSDIHFVDWPEITQIIWLAPPRPVDWSHFIKTLSALRPHSGEENK VGTAPLTS >gi|237663592|gb|GG668926.1| GENE 83 91069 - 91566 488 165 aa, chain + ## HITS:1 COG:BS_sigV KEGG:ns NR:ns ## COG: BS_sigV COG1595 # Protein_GI_number: 16079766 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus subtilis # 7 161 2 157 166 88 33.0 6e-18 MVFDGWKRKKQIRALETLVDTKYEKMYRIAFNYTHSKEDALDVIQESFEKALKAIQKGPD IKDFEAWFFRILLSVATDYWRKKKREAVHIEKDEHVLALLNNPQRSFLEIEEIINQLDSP NREIILLKFFEGFTLKEIALILDINENTIKTKMYRSLNELRSLLN >gi|237663592|gb|GG668926.1| GENE 84 91591 - 92475 795 294 aa, chain + ## HITS:1 COG:no KEGG:EF3179 NR:ns ## KEGG: EF3179 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 294 1 294 294 528 99.0 1e-148 MEDFVKSVVKNFSKEYRQQPLPTDLQAEVKARFHKEKKRYTWLRFRNRSLQSSLVVACGF VLSVNLFPGFSEAARNIPVLDKIVQLVTIKTLTAKKQESEVNIDVPKIQTSQESSVADTL NKKYLKEAQTEFQQVKGQLFDGSRVSVTGDYEKVVDDRRFLVVKRTFTEIKGSSATTTKY DTIDKRANVVVSLPLIFKNDFYIDVISSEIKQQIADQMKNDSNKIYWSEKEDAPSDVQPF KKIKKDQPFYINEKHQLVIVFPQGEIAPYYMGTPEFVIPNQVIENELAAPNYFK >gi|237663592|gb|GG668926.1| GENE 85 92605 - 93741 1322 378 aa, chain + ## HITS:1 COG:lin0289 KEGG:ns NR:ns ## COG: lin0289 COG0624 # Protein_GI_number: 16799366 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Listeria innocua # 1 377 1 378 378 389 56.0 1e-108 MEKSEKISILQDVVKIKSVNGNEEEVAIYLQNLLKKYEIPSELVSYAPNRSSLVAYLGEN REKVLGFSGHMDVVSEGDESQWTFPPFAAHIEGNKLYGRGATDMKSGLVAMVLAMIELKE KKVPLNGAVKFLGTVGEEVGELGAEQLTEKGYADDLSALVIGEPTNYNLMYAHMGSINYS VVSHGKEAHSSMPEEGINAINNLNEFITEANQQMAEVTANYENPELGRTIHNVTVIKGGT QVNSIPGQAALQGNIRSIPEFSNDQVIALLQKIVDELNKKEKHQLELTIDYNKIPVKAEK DSALIQAIQAQFDQPLPLITAAGTTDLAEFTKSKNKFDCVVFGPGVPTLPHQIDEYVEID NYLDMIDKYQAIAKSYLN >gi|237663592|gb|GG668926.1| GENE 86 93794 - 94585 746 263 aa, chain - ## HITS:1 COG:no KEGG:EF3177 NR:ns ## KEGG: EF3177 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 263 1 263 263 486 98.0 1e-136 MDLHLTVDLKKTKTLIDLADQAHLIIEQTTKLPKKEAAILFLLRDNQLVALGLAEEKATY KEVSFDHSILLKPTWDTELAYLAQAFLDDAKESGLTLEATPTTVKIPKSAVATVTNYKET VTFILERFGYSLFKKPAPKKARPAKARHKWTKEVSQIPFYIDTRQSKATVFWQKRNEMLI KSGATMMPEAPLNKDGSVGFSARFGEKLRDEHKGQFKDFVTTEDIVLKSVNEVGLFLYFA GTNSWLELVDENGKTLNEWTVVE >gi|237663592|gb|GG668926.1| GENE 87 94749 - 95132 326 127 aa, chain + ## HITS:1 COG:VCA1051 KEGG:ns NR:ns ## COG: VCA1051 COG3304 # Protein_GI_number: 15601802 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Vibrio cholerae # 1 119 2 130 143 95 44.0 2e-20 MKTLGNILWFIFGGFFGGLSWLFAGVIWCITIIGIPIGLQCFKLAGLSFWPFKKRVVYSD SGVSLVVNIIWLIISGLPLAIGHCISGLLLCLTIIGIPFGQQSFKLAKLALMPFGARVVS TNDFYFE >gi|237663592|gb|GG668926.1| GENE 88 95221 - 95646 523 141 aa, chain + ## HITS:1 COG:BS_ywnA KEGG:ns NR:ns ## COG: BS_ywnA COG1959 # Protein_GI_number: 16080716 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Bacillus subtilis # 3 135 2 132 133 116 50.0 1e-26 MAMSTKLSVAIHILSLIETGPQEQVTSEYIASSVNTNPVVVRRLMSQLKKAGLIHSMRGA NKNTLLKKPEEISLYEIYTAVELEREIFNIHQNPNPNCSVGANIQSVLETEFTKVQQKME EELKSITLADVIHEIEVKRDK >gi|237663592|gb|GG668926.1| GENE 89 95714 - 96334 850 206 aa, chain + ## HITS:1 COG:BS_ywnB KEGG:ns NR:ns ## COG: BS_ywnB COG2910 # Protein_GI_number: 16080715 # Func_class: R General function prediction only # Function: Putative NADH-flavin reductase # Organism: Bacillus subtilis # 1 204 1 208 213 192 50.0 3e-49 MKVAVLGATGKEGQLLLAEAKRRGMDVTAIVRNASKITDGTPTIEKDVYQLTTEDIQAFD VLISALGFPNVQDFPKSTQHLIEILTNQKTRLFVVGGAGTLYVDPEHTTQLKDTPSFPAE IQPLASAMGEALNLLKEAQNIHWTYISPAAMFDAEGPATGHYEVAGEELTTNSQGDSYIS YADYAVAMLDEVESNAHPNQRISVYQ >gi|237663592|gb|GG668926.1| GENE 90 96413 - 97618 1520 401 aa, chain - ## HITS:1 COG:no KEGG:EF3173 NR:ns ## KEGG: EF3173 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 20 401 20 401 401 456 98.0 1e-126 MSVVLVLLGLLGLLVSGGLTIKALIKKQPKKQYGYAALASAALFIGGVATTDSSPTLSLD AESVETDANGSATIKGEYDGNSKLTANGKEVKTKDKTFAYKVKLSDEKTQKITFVAEKKD TKVEKSVEVTPSKEFIASITDSEQELAKTEKALAYAEKQPSQKNYDEAATLVSSLSQEYE EYNDRLEKIKEAVPVDEAVTTAEKSKSKSDYQAAEKLVAAAPVGKEGFQQRLATVQTAIA EKEKNEQLVASATAAVEKAEQEPTNEAYYNEAIKQIDALNSPNQALTKRVAVVKTQLDTH KEKQRKEAEAQKLAAEKAQKEQAEAAAKAQAEAETQQAAQAPAEVETAAAEAPSGNALIK GSRNGIYHVPGSRYYNKTTNPVAWFSTVEEAEAAGYRAPKQ >gi|237663592|gb|GG668926.1| GENE 91 97810 - 99054 212 414 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 268 406 759 898 904 86 38 1e-15 MKAEIIAVGTELLLGQVVNTNATFLSEELAALGIDVYYQTVVGDNGGRLETLLTEAEQRS DLIVLCGGLGPTEDDLTKQVVAQHLHKSLVEDQEGLNRLHQFFQQSKRPMTENNLRQVLA IEGGQVLQNPTGLAVGSFVTEGATSYLLLPGPPNELIPMFQQAARPLLIDAFPQEEQLIS RVLRFYGIGESQLVTEIQSLIAHQTNPTIAPYAKPNEVTLRLTVKTKDLVAGEELLTATE EKILAKVGDYFYGYGDDNSLAKVTVDLLLQNGQTVTAAESLTAGLFQSTLGEIAGASKIF KGGFVTYSQETKENFLGISHELLEEHGTVSEACAKEMAEKARQLAKSNYGLSFTGVAGDP LEGQPTGTVWIGLAEEGQPTVAECFHFNRDRNYIRQSAVMRGLDLLRRRIINKK >gi|237663592|gb|GG668926.1| GENE 92 99168 - 100214 1517 348 aa, chain + ## HITS:1 COG:lin1435 KEGG:ns NR:ns ## COG: lin1435 COG0468 # Protein_GI_number: 16800503 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Listeria innocua # 3 346 2 344 348 508 79.0 1e-144 MADDRKVALDAALKKIEKNFGKGSIMKLGEKADQKISTIPSGSLALDVALGVGGYPRGRI IEVYGPESSGKTTVSLHAIAEVQRNGGTAAFIDAEHALDPQYAEKLGVNIDELLLSQPDT GEQGLEIADALVSSGAIDIVVIDSVAALVPRAEIDGEMGASHVGLQARLMSQALRKLSGS INKTKTIAIFINQIREKVGVMFGNPETTPGGRALKFYATVRLEVRRAEQLKQGTDIVGNR TKIKVVKNKVAPPFKVAEVDIMYGQGISQEGELLDMAVEKDLISKSGAWYGYKEERIGQG RENAKQYMADHPEMMAEVSKLVRDAYGIGDGSTITEEAEGQEELPLDE >gi|237663592|gb|GG668926.1| GENE 93 100374 - 100679 351 101 aa, chain + ## HITS:1 COG:lin0914 KEGG:ns NR:ns ## COG: lin0914 COG1440 # Protein_GI_number: 16799986 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 100 1 100 101 125 78.0 2e-29 MKNILLICGSGASSGFMAAAIRKAAKKRQIEVTVKATSESQLDERINEIDCLLIGPHLAY MLNDIQEQMAEKKVKAMIIPQAIYGTLDGEKALDLIMTMEE >gi|237663592|gb|GG668926.1| GENE 94 100684 - 101934 934 416 aa, chain + ## HITS:1 COG:BH3919 KEGG:ns NR:ns ## COG: BH3919 COG1455 # Protein_GI_number: 15616481 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Bacillus halodurans # 8 409 5 425 430 152 29.0 2e-36 MKKIMDFMTNSFAPKVNKVVKNPWISAIQDAIMAALPLVFVGSLVTVVSLLKNLFPSMPD FSMISNFSFGMFGLIVSFMIPYYLMEKKGHSGQKLIAGATSIVLFMMLLFPTLSEKGEIT FILSRFGATGMFLAMITGLFVSLVMHLAAKKSFFDEDTPIPDFVVGWFNSLLPITFILFV GWLITIQFRIDFFDIVILIFSPLANIVQSYPGFVLSVFIPVFLYTFGISGWVMMPVIYPV YMAGLAANAEAVANGGHAVNIATQETCYAFSSMGGIGATLSLSVMMVLLSKSAQLKAIGK AVLIPSIFNINEPLVFGAPIAFNPYLMIPMWINALVVPSIAYATMYWGFVNIPTQSFLLW YMPYPFTSYLATQDIRAVVVCVLIFVITWLVFLPFFKAYDQSLLKQEKEVQKEVII >gi|237663592|gb|GG668926.1| GENE 95 101954 - 102295 388 113 aa, chain + ## HITS:1 COG:lin0917 KEGG:ns NR:ns ## COG: lin0917 COG1447 # Protein_GI_number: 16799988 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Listeria innocua # 1 106 7 112 116 117 66.0 4e-27 MEENEQLNQLSMNILIHAGNARDHLVQALEKLEETSYEQAQKELIEARKEVVLAHGIQTD TLQLEASGEQIRYSTLFCHAQDTLMTAQSEILIGEHLVKLFKKFSQQLCQEEK >gi|237663592|gb|GG668926.1| GENE 96 102295 - 103740 1654 481 aa, chain + ## HITS:1 COG:lin0918 KEGG:ns NR:ns ## COG: lin0918 COG2723 # Protein_GI_number: 16799989 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 1 481 1 481 483 792 77.0 0 MFKDYQMPKDFLWGGAIAANQAEGAFQVDGKGISLADVHKYYPDKTNAEISQEQIKGMSV ADIQANLADTDGYYPKRHGIDFYHTYPEDLALLKELGFKTFRTSIDWTRIFPTGEEETPN EAGLAYYDRLIDKIIELGMEPIITILHYETPIEISLKYGGWNNRKVIDLFVKYGKVLLER YKEKVKYWIVINQINLIQFEPFNSTAIPYDTVDNYEEASFQAIHHQFIASAQLVAYAKKI NPQMQMGTMVADCTVYPFSCKPDDVILAMKRNRMEYFYTDVQFRGEYPQYALNYFEEHGI EIDITLEDQQMLKENTMDYLAISYYYSQMVDSEKNSMNPASVTPNPTLKVNPWGWAVDPQ GLYNSLSQYWDRYGKPIIIAENGFGMYDKVTDGQIHDDYRISYLSEHIQQMKKAMYDGVD VIAYCAWGPIDIISCSSAQMEKRYGFVYVDLDNEGKGTGKRMKKDSFTWYQKVIATNGEE I >gi|237663592|gb|GG668926.1| GENE 97 103818 - 105713 1360 631 aa, chain + ## HITS:1 COG:lin0919_1 KEGG:ns NR:ns ## COG: lin0919_1 COG3711 # Protein_GI_number: 16799990 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 5 504 4 505 505 409 46.0 1e-114 MESKQREIILFLESQQHHWVTAKELAEFCGCTTRTIRNRVAKINEAYPEAILSSQRGYRR NDQISILQETPSKERKARIFLELLKHSSEGVNLYDLADCLYISESTAKNDLQQLKEELAN QQTTICFKGANIWLTGTERAKRQYMVSLLYAESDFQEKLTRSVREMIGYISLEELEEMIQ QTFFNYERRLNQYVLNNIVLHYAISIERIRQGHTLLTKPKLAENHSEEYQMAKEIALRLE ETYDILFSKEELAQLSLLFVGIQKEHTVNSEKTQLQQIVNPKIIEVLEEVLQKVEQIYFI QLKNKEFFNKLAIHLQGLYDRSNVEAFTRNSRLWDLKTGYPLIYDISVYISSFIQERLNI WFTEDEISFIALHLGSFLESQRTEQQPFLLLLVVEDYHNMREVLQKKLQEHFGNQINIKV VRQTNIDQKKFDLLVTTNRRLATKYEGAIFIHPFITTKELRKIENRMYLLKGQKRKRQME IRTDQFIAKELYFSQIDPADLTPEMLLDQMIQRMRIQKYCSSDFKKSVKKREQLSPTSFP SGIAVPHAIDRTAEKSGISIMTLQEPIRWANYEVKLVALVAIRQEDAPIFDDFFEKFIEI MSEPIHIKQLSQTADYAAFVLKFKQFVTAET >gi|237663592|gb|GG668926.1| GENE 98 105909 - 107465 2055 518 aa, chain + ## HITS:1 COG:lin1436 KEGG:ns NR:ns ## COG: lin1436 COG1418 # Protein_GI_number: 16800504 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Listeria innocua # 1 518 3 520 520 608 73.0 1e-174 MVLNILLAIVGLIVGLGLGFVIAKSRHDKAINGAKISASSILENARKESETLKKEALLEA KEENQKYRSEIESELKESRLELKSQENRLIQREQTLDRKDDSLEKREGSLEEKEEKLGAR QQLIDEREKEVENLINQQHQELERIASLSKEEAKSIIMKSTEEELNHELTLMVKESEQRA KEESDRKAKNLLSLAIQRCAADSVSETTVSVVTLPNDEMKGRIIGREGRNIRTLETLTGI DLIIDDTPEAVVLSGFDPIRREIARMTLEKLIQDGRIHPARIEEMVEKSRKEMDERIREY GEQAAFEVGAHTLHPDLIKILGRLRFRTSYGQNVLNHSIEVAKLAGVLAAELGEDVQLAK RAGLLHDIGKALDHEIEGSHVEIGAELAAKYKENSVVINAIASHHGDVEATSVISVLVAA ADALSAARPGARSESLENYIRRLENLENISNSFEGVDSSFAVQAGREVRVMVKPEEISDL ESVRLVRDIRKKIEDDLDYPGHIKVTVIRETRAVDYAK >gi|237663592|gb|GG668926.1| GENE 99 107625 - 108422 941 265 aa, chain + ## HITS:1 COG:lin1438 KEGG:ns NR:ns ## COG: lin1438 COG1692 # Protein_GI_number: 16800506 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 263 1 264 267 380 67.0 1e-105 MRILFIGDVVGSLGREALATYVPKLKKKYRPQVTIANGENAASGRGITGKIYKKFLQDGV DVVTMGNHTWDNKDIFEFIDDAKKMVRPANFPEDVPGQGMVFVKVNQLELAVINLQARTF MVPLEDPFKKAAELVAIARKRTPLIFVDFHGETTSEKQAMSWFLDGQVSAVVGTHTHVQT NDARILPKGTAFLSDVGMTGPYDGILGMKREPIIEKFMTALPKRFEVVETGRTILSACIL EIDDQTGQAKMIEPIQISEDRPFQE >gi|237663592|gb|GG668926.1| GENE 100 108511 - 108882 621 123 aa, chain + ## HITS:1 COG:no KEGG:EF3168 NR:ns ## KEGG: EF3168 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 123 1 123 123 170 100.0 2e-41 MEPLNLDAQSNKELEKLLHLIGQDEVIQRYQAIEEKVKKNKKLTELVEEIKAAQKDAVQF AHYGKPTAEKEAIQRADAKTKEFDEHPLVVAYREQLIEANDLVQHVTALIQYRVNEELEK EGN >gi|237663592|gb|GG668926.1| GENE 101 108883 - 111459 2816 858 aa, chain + ## HITS:1 COG:lin1440 KEGG:ns NR:ns ## COG: lin1440 COG0249 # Protein_GI_number: 16800508 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Listeria innocua # 5 858 2 859 860 993 60.0 0 MPQKTKNTPMMEQYLSIKAQYKDAFLFYRLGDFYELFYEDAINAAQILELTLTSRNRNAD DPIPMCGVPYHAAQGYIDTLIEQGYKVAICEQVEDPKTTKGMVKREVVQLVTPGTVMNSK GLEAKDNNYLTAVLTDGNQFGFAYVDLSTGELKTAVLADEEGVLNEASALQTKEMVLGSG IPESLKENLSLRLNIIFSTQETVEENAEFSFLTNELINPLEIEITGKLLSYLSVTQKRSL SHIQKAVEYQPDHFLKMDHYSKFNLELSQSIRTGQKKGTLLWLLDETKTAMGGRLLKQWL DRPLIQERQIKARQEMVQSLLNAYFERLDLQAALTNVYDLERLAGRVAFGSVNGRDLIQL RTSLEQVPTIRQLIVGINQGEWDDLLVDLNPVEDLVALIATAINEEAPLQITEGNVIKDG YNDQLDEYRDAMRNGKQWLAELEAKERQETGIKNLKIGYNRVFGYFIEITKSNLANLEEG KYERKQTLANAERFITPELKELERLILEAEEKSVELEYQLFLAVREQVKTNIDRLQTLAK TISAVDVLQSFATISERYQYVRPTLRSNTKNLAIVEGRHPVVEKVLGHQEYIPNSIRMTP ETDILLITGPNMSGKSTYMRQLALTVVMAQIGCFVPAESAEMPIFDQIFTRIGASDDLIA GQSTFMVEMMEANQALRHATPNSLILFDELGRGTATYDGMALAQAIIEYIHREVQAKTLF STHYHELTVLDETLKGLKNIHVGAVEKDGEVVFLHKMMEGPADKSYGIHVAKIAGLPSPL LERAATILSALEAEETTIPSSVHHEEVSEVHEETEQLSLFKEVSTEELSVIDTLKKMNLL EMTPLDALNMLHQLQKRI >gi|237663592|gb|GG668926.1| GENE 102 111491 - 113623 2168 710 aa, chain + ## HITS:1 COG:SPy2121 KEGG:ns NR:ns ## COG: SPy2121 COG0323 # Protein_GI_number: 15675871 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Streptococcus pyogenes M1 GAS # 1 710 1 651 660 683 52.0 0 MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDN GEGIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEE GSYVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLAL SHPKVAFRLVHDGHKMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSLP EVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNVH PTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLRFKKKLPPEPKAEQMEIPLST EQPAVKQRPGSLSYNPATGRFYAEHATDETPVSSAPEAVNQTERAVDPMDDPFAPPVPES TSVAEETSAYEISSAAVDSANHWETASNEQQIIAEETKITEVPDSEPSLRSSEAADEVFQ EEMKLHPEFDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFI IDQHAAQERIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLE DFGQNSFIVRAHPTWYPAGEEESIVREMIDMLLTTGSVSVKKFREATAIMMSCKRSIKAN HYLNEQQARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKRIQDPH >gi|237663592|gb|GG668926.1| GENE 103 113648 - 114202 669 184 aa, chain + ## HITS:1 COG:BS_maf KEGG:ns NR:ns ## COG: BS_maf COG0424 # Protein_GI_number: 16079857 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Bacillus subtilis # 3 184 5 186 189 168 46.0 5e-42 MQIILASQSPRRQELLKRVVPTFTIAPADIDETVGKDGLPAEYVAQMAAQKAAAIAEQTP EALVIGCDTIVALAGEILGKPTSREDGYRMLRLLSGKTHDVYTSVTLKQGEKERSATVHS TVTFYPLTDTEIYAYLDTAEYADKAGAYGIQGQGALLIEAIAGDYYAIMGLPIAKVARLL KEFN >gi|237663592|gb|GG668926.1| GENE 104 114335 - 114772 430 145 aa, chain + ## HITS:1 COG:SPy1055 KEGG:ns NR:ns ## COG: SPy1055 COG0229 # Protein_GI_number: 15675047 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Streptococcus pyogenes M1 GAS # 5 144 3 142 145 196 65.0 1e-50 MTKPTEEELKQTLTDLQYAVTQENATERPFSGEYDDFYQDGIYVDVVSGEPLFSSLDKYD AGCGWPSFTKPIEKRGVKEKADFSHGMHRVEVRSQEADSHLGHVFTDGPLQEGGLRYCIN AAALRFVPVADLEKEGYGEYLSLFK >gi|237663592|gb|GG668926.1| GENE 105 114947 - 115918 1088 323 aa, chain + ## HITS:1 COG:lin0238 KEGG:ns NR:ns ## COG: lin0238 COG0462 # Protein_GI_number: 16799315 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Listeria innocua # 1 319 1 318 318 464 75.0 1e-130 MSKHYFDPRLKIFSLNSNRPLAEKIADAVGVELGKCSVTQFSDGEIQVNIEESIRGAHVY VIQSTSSPVNDNLMELLIMIDALKRASAKTINVVMPYYGYARQDRKARAREPITAKLVAN MIEKAGATRMLTLDLHAVQIQGFFDIPVDHLMGAPLIADYFIEHGIQGDDVVVVSPDHGG VTRARKLAEFLKAPIAIIDKRRPKANVAEVMNIIGHVEGKTCVLIDDMIDTAGTISLAAN ALKEAGAKDVYASCTHPVLSGPALQRIEDSAIERLVVTDSIYLSDDRKIAKIDEVSVGEL IGDAIKRIHENKPVSPLFETKNK >gi|237663592|gb|GG668926.1| GENE 106 116105 - 116506 96 133 aa, chain - ## HITS:1 COG:no KEGG:EF3161 NR:ns ## KEGG: EF3161 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 133 1 133 133 182 98.0 5e-45 MSLIAIKNNEKTLIIFDSILSLIIIIVLSVFYKKIVKKKKQAIFKSLLLAIGMFLFSIIL NLLFSRIPTPENQHYINEVRNVAPVLMALHTRLFSPIIEELLTRGIFMNLFFIKNTSRSV LCKIFFSGLFFWS >gi|237663592|gb|GG668926.1| GENE 107 116790 - 116915 170 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKITERPIVKILIKILMFALCFYAGIKFVDFIFPLVGFKQ >gi|237663592|gb|GG668926.1| GENE 108 117332 - 117982 679 216 aa, chain - ## HITS:1 COG:BS_yvdM KEGG:ns NR:ns ## COG: BS_yvdM COG0637 # Protein_GI_number: 16080508 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Bacillus subtilis # 6 213 5 212 226 200 48.0 2e-51 MTIGFIFDLDGVITDTAKFHYQAWKALADSLGIPIDETFNETLKGISRMDSLDRILAHGH RENAFTPAEKEALAQQKNDHYVQLLEHLTTEDVLPGVVPLLQQAQARHIPCAVASASKNA PLILEKLGVRAYFATIVDPDSLSKGKPDPEIFLAAADSIGVLPQNAIGFEDAQSGIDGLK AAGIYAVGLSASQPLLGADIQVSEMTELSVDVMLNR >gi|237663592|gb|GG668926.1| GENE 109 117997 - 120708 2179 903 aa, chain - ## HITS:1 COG:L39593 KEGG:ns NR:ns ## COG: L39593 COG1554 # Protein_GI_number: 15672410 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Lactococcus lactis # 118 880 6 746 769 513 38.0 1e-145 MTILELTFATNQLTTTFFNHKLEPLHQKTFPFEALTIEETVPELCQLILAEAAPILGGIV ADFPADFFSPEETLALVPQAVIQAFAEQLNTPLLTAAEQAATPNLLEAFEEKRQYLAWHL DYYGYVPGKNEYAVESLLTVGNGFLGLRGTIPEMSISDDHYPATYIAGLYNTAASEVAGQ VVENEDFVNAPDNQHIALKIGDATDWLTISPDTLQQLHRQLNLKTGLFVAEMILKDADNQ QIKLTTKKIANMAQPNDYHLQYTFEPLNFSAPITLKTVTDGSVYNYNVARYRNLTAKHFQ VTALSAQENKTVIEVCTNQSNLSVRETALITGDFFEKEAITIQEEAEKIAQVVTVMAHQG TRYTLEKQVYVQASHAEQSWQVPFTPKDSFAAAAQESARAWQTLWQQANITVTGDLMSQK LLRIHSYHLLASASPFSNQAQALDVSITARGLHGEAYRGHIFWDEIFILPFYIQHYPDTA KQLLLYRYHRLEKAKENAAASQYRGAMYPWQSGRDGRETTQKLHLNPLNGHWGEDHSILQ RHVSLAIAYNAWLYWHSTQDHEFMKQYGGEMLLEIAQFWNSAATLDDATGRFFIDKVMGP DEFHEGYPDQAESGLKNNAYTNLMVVWLFEELTNILALFSEEEQAQLFAKTQTTSGDLAR MQQIQNSLEIEVNSDGIIAQYEGYFGLKEIDWAAMKEKYGNIYRMDRILKAEGESPDDYK VAKQADTLMLFYNLDKTRVDQILEDLGYQLPADYLEKNLLYYLKRTSHGSTLSRIVHAQL AEMAQFHELSWQLYQEALYSDYRDIQGGTTAEGIHTGVMAATIHVTLATYAGVDTRQNEL SICPNLPEHWQSLAFQFIHQGVTYQFSLTQTSVTITADKDTQLLVQGALIPLTAERPKEV HYQ >gi|237663592|gb|GG668926.1| GENE 110 121002 - 121715 731 237 aa, chain + ## HITS:1 COG:lin1221 KEGG:ns NR:ns ## COG: lin1221 COG2188 # Protein_GI_number: 16800290 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 2 235 5 237 237 228 52.0 9e-60 MNKFHDIFLELEQQIVQGDYQPGDLLPSENQLVETYNVSRETIRKALNLLINAGYIQKKQ GKGSIVLNFKKFNFPISGVTSYKELQQTQHIESHTHVVSLEEIPVERNLAQLTGWTEGAP VWRLVRQREIEGEVDILDIDYLIKEIVPELPKHRAEDSIFDYLENDLGLAISYAQKEITV EPLTEMDKQLIGEVEGNHVVVVRSIMNLEDTRCFGYTESRHRLNKFKFVEFARRRKL >gi|237663592|gb|GG668926.1| GENE 111 121993 - 122091 102 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYASFVQEFPECVSEAMALIIQDSPASVILNI >gi|237663592|gb|GG668926.1| GENE 112 122094 - 122792 811 232 aa, chain + ## HITS:1 COG:no KEGG:EF3155 NR:ns ## KEGG: EF3155 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 232 2 232 232 199 50.0 9e-50 MKKKLFASLLVGSAVVGANLVPLSAQAVTTGNTPVQVEFDGGKLADQGDDTGAIVDPDPT KPNTNFDLLAIPKIFDFSPVKIGEDLTAIKPISTKPKSIMVGDVRGTKEGWHVTGEVVSM SNGTDTLDGQITFGMTPYYAIFNESTSSYGGFNTLNGMNIANDPTAPSFNGASLKIGGGA TTLINAPLGKGQGTWSGRLDNLTLNVTTPMQQLKKGAYTGNVTWNLVAGPAI >gi|237663592|gb|GG668926.1| GENE 113 123355 - 124032 631 225 aa, chain + ## HITS:1 COG:no KEGG:EF3154 NR:ns ## KEGG: EF3154 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 225 15 236 236 320 78.0 4e-86 MVGASLAPLSAQAVTTGNTPVQVEFGGGTLPDGGGIPNAVRPDPDATNSNFDLLFIPREF DFGKLSISDDLTKPIPNKADKESSGTIYTESVGVGDIRGTKEGWHVTAQSTGMKLGNENL EGSITTSGINLYPLIYNEETKTYDAQSSSLVDPVSKPEIVNAKSFSIPLGGDAALFANAT AGKGQGLWHFSMFETALNITTTAYNIKAGNYTGNITWNLVAGPSI >gi|237663592|gb|GG668926.1| GENE 114 124073 - 124522 732 149 aa, chain - ## HITS:1 COG:mlr5692 KEGG:ns NR:ns ## COG: mlr5692 COG1970 # Protein_GI_number: 13474738 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Mesorhizobium loti # 1 133 18 157 157 93 43.0 1e-19 MIKEFKEFIMRGSVLDLAVGVVIGSAFTAIVTQVVEGLITPLISLIFVLTTGKKSADDAL GALVYKVEGVEFNIGSVISALITFLITAFVLFLIVKAANKMKNRGKKEEAAEEEVVPTSE DYLKEIRDLLAAQTPPAETVKTDSTFTEK >gi|237663592|gb|GG668926.1| GENE 115 124731 - 125999 1211 422 aa, chain + ## HITS:1 COG:L32666 KEGG:ns NR:ns ## COG: L32666 COG0612 # Protein_GI_number: 15673955 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Lactococcus lactis # 11 421 2 408 418 312 44.0 7e-85 MSVQLVKGVNLHVIPTEKYKTVRLLVRFNTRLNHETITKRTLLSSLMETNSLNYPNQVKL SERLAELYGASFGIGVSKKGNQHWFNISMNIVNDHYLQDSQVLAEAVDFLKEIIFAPNIQ AGQFEAETFQREKENLKAYLESIVEDKQTYASLALQSVYFNQSEDQKIPSFGTVAALAEE TAASLAAYYQKMLAEDQVDIFVLGDVNEAELVPLFKQLPFTPREEGKAAIFYNQSIRNVI EERTEREVLAQSKLNLAYNTDIYYGDSYYFALQVFNGIFGGFPHSKLFMNVREKEHLAYY ASSSIDTFRGFMTVQTGIDGKNRNQVLRLISTELENIRLGKISELEIEQTKAMLKNQYIL ALDNAGAWLEKEYLNELMPQTMLTAEEWIARINAVTIPEIQEVAKRLELQAIFFLEGETE ND >gi|237663592|gb|GG668926.1| GENE 116 125992 - 127296 1414 434 aa, chain + ## HITS:1 COG:lin1430 KEGG:ns NR:ns ## COG: lin1430 COG0612 # Protein_GI_number: 16800498 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Listeria innocua # 1 429 1 427 428 449 54.0 1e-126 MIKKDYAQIKETLYTETLENGLKVYLLPKNDFQKTYGLFTTDYGSIDNTFVPIGQEEMIE VPDGIAHFLEHKMFEKEDGDVFQKFGQQGASANAFTSFTKTSYLFSTTDQVTQNLETLLD FVQSPYFTKETVEKEKGIIGQEIQMYLDDPNWRLFFGILGNLYPKHPLHIDIAGTVASIA EITAEDLYTCYNTFYHPSNMTLFVVGKMDPEALMAFIRENQAAKEFPAAQPIRRHFPEET AADIVKESAIEMAVTRAKVLVGLKGLDEVPTTGRDLMKYQVTVNLLLQLLFGNTSQNYLA LYDEGLLDDSFSYDFNLDRSFHFADIGGDSEQPEVLAERIEAILLSATTSPELTEENLSL LKKKMIGKYFQSLNSLEYIANQFSQSLFGETTLFDKIEVIESIQLADVRQVAETFIREEG LSRFYMYPKGETEQ >gi|237663592|gb|GG668926.1| GENE 117 127464 - 128330 859 288 aa, chain + ## HITS:1 COG:lin1432 KEGG:ns NR:ns ## COG: lin1432 COG1426 # Protein_GI_number: 16800500 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 6 285 4 299 311 99 27.0 9e-21 MASVNIGETLKEARLQKNISIDELQQMTKIQKRYLEIIEQNDFESLPGTFYVRAFIRQYA SAVGLDGNQLVDIYDGKEPAIVEEPKPVYEELEGSRKQLHDEEKQSSWLLRNLPAIAFSL IGLAIAVVVLYIMWQDQKAEPIIQTPATSASVEKPKESSQAPESSTQSSTPPSSSSEPEK KTAVAVVSDANNQVTATVKDANSPINITFKGTEGSCWIGVMVDGNYTYQHTLQAGETQTT ALPANAANATLILGASNNVAIQVDGADLTLEKTPVLIRKDVTLGITYR >gi|237663592|gb|GG668926.1| GENE 118 128457 - 128669 202 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255970662|ref|ZP_05421248.1| ## NR: gi|255970662|ref|ZP_05421248.1| predicted protein [Enterococcus faecalis T1] predicted protein [Enterococcus faecalis DS5] predicted protein [Enterococcus faecalis JH1] hypothetical protein CUI_2058 [Enterococcus faecalis PC1.1] hypothetical protein HMPREF9498_02637 [Enterococcus faecalis TX4248] hypothetical protein HMPREF9521_02248 [Enterococcus faecalis TX2134] hypothetical protein HMPREF9505_02294 [Enterococcus faecalis TX0109] hypothetical protein HMPREF9504_02348 [Enterococcus faecalis TX0102] predicted protein [Enterococcus faecalis T1] predicted protein [Enterococcus faecalis DS5] predicted protein [Enterococcus faecalis JH1] hypothetical protein CUI_2058 [Enterococcus faecalis PC1.1] hypothetical protein HMPREF9505_02294 [Enterococcus faecalis TX0109] hypothetical protein HMPREF9521_02248 [Enterococcus faecalis TX2134] hypothetical protein HMPREF9498_02637 [Enterococcus faecalis TX4248] hypothetical protein HMPREF9504_02348 [Enterococcus faecalis TX0102] hypothetical protein HMPREF9501_02433 [Enterococcus faecalis TX0027] hypothetical protein HMPREF9502_01777 [Enterococcus faecalis TX0031] hypothetical protein HMPREF9508_00799 [Enterococcus faecalis TX0312] hypothetical protein HMPREF9516_01962 [Enterococcus faecalis TX1302] conserved hypothetical protein [Enterococcus faecalis 62] hypothetical protein OG1RF_12411 [Enterococcus faecalis OG1RF] # 1 70 85 154 154 113 97.0 5e-24 MLKIVNKKFNLITIFSIALLVIGFLIVGLQLYFYFIYGSKFLDSITLIGMINFGLGYYQL FLKKGKNISE >gi|237663592|gb|GG668926.1| GENE 119 128768 - 129346 331 192 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 5 187 484 668 904 132 40 2e-29 MNLPNKLTVLRIFMIPIFIIIVSVPMDWGTISFGDTTLAVTQLVGAIIFAVASFTDWLDG KIARAQGLVTNFGKFADPLADKMLVMTAFIVLVGQGKVPAWIVAIIVCRELAVTGLRLLL VEHGEVMAAAWPGKVKTATQMVAIILLFINNIPFSALHLPLDQIMLYACLIFTIYSGVDY FAKNKDVFKGSM >gi|237663592|gb|GG668926.1| GENE 120 129464 - 129571 78 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTDSFSALWNGTGGDNYEKNRVSLLYYFVHIFNGV >gi|237663592|gb|GG668926.1| GENE 121 129513 - 129929 360 138 aa, chain + ## HITS:1 COG:no KEGG:EF1844 NR:ns ## KEGG: EF1844 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 138 1 138 138 186 79.0 3e-46 MKKIGYLCCIILFIFLTGCSHNEKESGHLLDNNSFPLILTTITEQEEDLTKGSIFFNKDK TMTFEKEYLVNPNNEDTLKTSRAEKEVYQNIKIKENRDSYEITGQLDKKTNTITFKKVDK GKRLSDAEGNVYGDFGGK >gi|237663592|gb|GG668926.1| GENE 122 130077 - 130964 798 295 aa, chain - ## HITS:1 COG:L54944 KEGG:ns NR:ns ## COG: L54944 COG1737 # Protein_GI_number: 15674168 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 6 288 5 280 282 151 33.0 2e-36 MKNHYLDQRIRIKKPNLSLTEKKISDYFVHSESLLTQMTLESLANEIGVSQSSVYQFVKK IGYSGFQEFKIDIARNSNYQPTFQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNAT QFLTKELLDNVLALMYSAKTLHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFV TKLTSEDCVFIFSHSGKTKESINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIVVTEE GLFRAESLASRISYLTVMDILYTNTMYHNFDQNADSLKKIRDNISTTKTDPHYLS >gi|237663592|gb|GG668926.1| GENE 123 131374 - 132273 962 299 aa, chain + ## HITS:1 COG:BH2674 KEGG:ns NR:ns ## COG: BH2674 COG1023 # Protein_GI_number: 15615237 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted 6-phosphogluconate dehydrogenase # Organism: Bacillus halodurans # 1 298 1 298 298 282 47.0 5e-76 MDIGFIGLGKMGLNMALNVHEQGWPIIGFDVTKEARATAREQGLSVVDSLSELLKALNKR KVIFLSTPAGQITNQLVAELVEQLAPEDIIVDSGNSNFHDSVANAQLAKEKGIYFIDCGT SGGIKGAREGACLMVGGAPEAVKVLTPFFEDLACEQGYLYAGKSGAGHYLKMVHNGIEYV MMQAMGEGFNLLEAAEYDFALEKVADVWNHGSIIEARLMGLAKEVFAENPTLANLEGKVA ANGEAKWMIEEALRLEMPVPTTALSLFTRNESMLANHFSNKVVASLRQGFGGHEVVKSQ >gi|237663592|gb|GG668926.1| GENE 124 132286 - 133287 854 333 aa, chain + ## HITS:1 COG:AF0813 KEGG:ns NR:ns ## COG: AF0813 COG0111 # Protein_GI_number: 11498419 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Archaeoglobus fulgidus # 37 325 26 311 527 173 36.0 4e-43 MLKKQKIAIVNSSSFGQIFPEHLTRLEKIGTVKHFTVDSEIGGKELAECLQGYTIIIASV TPFFTKEFFEHKDELLLISRHGIGYNNIDLDAAKQHDTIVSIIPALVERDAVAENNVTNL LAVLRQTVAADASVKADQWEKRANFVGRTLFNKTVGVIGVGNTGSCVVETLRNGFRCDVL AYDPYKSATYLQSYGAKKVDLDTLLASADIICLCANLTEESYHMIGSAEIAKMKDGVYLS NSARGALIDEEAMIVGLQSGKIAGLGTDVLEEEPGRKNHPYLAFENVVMTPHTSAYTREC LQAMGEKCVQDVEDVVQGILPQRAVQEVSRYVS >gi|237663592|gb|GG668926.1| GENE 125 133302 - 134408 1055 368 aa, chain + ## HITS:1 COG:lin1848 KEGG:ns NR:ns ## COG: lin1848 COG0371 # Protein_GI_number: 16800915 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Listeria innocua # 4 361 5 358 368 250 37.0 4e-66 MLTDLKVKVGPQFYRYHEGALASVPSLFKEYHAQRILVVHGTVSFEKAQPFLPFLADSEY QFFYHTYTGECSYFGAEQISQQIKEHQIDFLLGVGGGKLADLVGYSAHLNNLNFGLVPTL ASNCAPWTPLAVMYQENGAAEGKTEHFFRQAAFLITDPKLLLDAPRDYFVAGLADTLAKW YESETILRQAHLQGEPFLQLAGATAKLSQEAIMRDSKAALAAMDEGKLTPEFVHLSEIVF AVSGLVGGFGDKYARNAAAHAMHDAMSKFLPKSHDYLHGEKVAYGIFYQLALEKRWAIID ALIPFYQELNLPMSLRQMGLYPEEEAVLDAMVQFIDSKEKVHLIPIEISEERLRQGIEEL EKYIQNQG >gi|237663592|gb|GG668926.1| GENE 126 134421 - 135257 812 278 aa, chain + ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 34 256 30 249 249 119 33.0 5e-27 METLSVLQSLIMALWVAAIMSRWLGGGATLTLRFSPLMTGLVAGLVMGDVPKAMIVTAAL QMIYMGVFSPGGSMPAEPSIAAAIAVPVALLGNLKPEAAIAVAVPVGLLGSYLYQFRFFI NTFLGKYTDRAVAELNSKKIARSIIWYPTIASFILFVPLVFFALYLGAPVIADIIKALEG TVVIHVLEVVGGGLAAIGIATTVYVIGRKDFLVFFFLAYFMSIVFKSLEITMVTYAIFGV IIALIFVQVQKGKPVAESAGSASATTDFDDDDDYDDGF >gi|237663592|gb|GG668926.1| GENE 127 135278 - 136150 1203 290 aa, chain + ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 20 290 21 286 286 168 36.0 1e-41 MTETTEKVVPKTTNLAPEEITNKDVTKAYLRWHFANEIPHSFERYLAPSLLYAMMPLLKK LYKDDEQLKAAYMRQLLFFNTQLSWGGGVITGLMASMEQERAKEEHEGREIMMQDDLMYN TKAGLMGALAGIGDAIDSGTVQYIFIAIAVPWAQQGSALGAIFPFVAFALYQVLLGVFFA RQSFKMGRNATGLMQSAGIQKAIEMLSVLGLFMMGILAGNYVKVSSTLQFKLSGREFVVQ DILDQIVPGLLPLAVVMGVYWFYTKKGLKVTQALLWLTGILIVLATVGIL >gi|237663592|gb|GG668926.1| GENE 128 136172 - 136678 596 168 aa, chain + ## HITS:1 COG:ECs5001 KEGG:ns NR:ns ## COG: ECs5001 COG3444 # Protein_GI_number: 15834255 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 4 151 3 147 164 67 30.0 1e-11 MGVVNLARVDERLIHGQVMVTLSQKSGVNSIFVVDEVVAKDKFMRDLYKSAGSRTGQKTI VITPEKAKFYWDEYQFKEYNCILIAKTVSVIYDLVKHGVPMKELNIGGIAQKNPEKDLLV TKSVYLNKEDAEKLKELHEVYGVEDIYFQATPSAPKTSLKEVLGKFNL >gi|237663592|gb|GG668926.1| GENE 129 136756 - 137208 716 150 aa, chain + ## HITS:1 COG:CAP0066_1 KEGG:ns NR:ns ## COG: CAP0066_1 COG2893 # Protein_GI_number: 15004770 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Clostridium acetobutylicum # 1 131 1 127 157 71 34.0 6e-13 MLGIVIATHGALSDGAKDAATVIMGATENIETVNLNSGDDVQALGGQIKTAIENVQQGDG VLVMVDLLSASPYNQAVLVINELEPALQKKIFVVSGTNLPMVLEAINHQLLGTPIAEAAQ AIVAQGKESVQAWDISMTSFEDEEDEDDDF >gi|237663592|gb|GG668926.1| GENE 130 137232 - 138305 1090 357 aa, chain + ## HITS:1 COG:TM0069 KEGG:ns NR:ns ## COG: TM0069 COG1312 # Protein_GI_number: 15642844 # Func_class: G Carbohydrate transport and metabolism # Function: D-mannonate dehydratase # Organism: Thermotoga maritima # 1 356 1 358 360 421 54.0 1e-118 MKWGFRWYGAAGDAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQEGLA FLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGKCGISLVCYSFKPIFGWAKTDLAYE NEDGSLSLLFDQAVVENMQPEDMYQLIHSQSKGFRLPGWEEERLQQFQELKAMYAGVTEE DLVENLRYFLERVIPVCEEENIKMGIHPDDPPWEIFGLPRITKNLADLKRILSLVDSPAN GITFCTGSLGADPTNDLPTMIREIGHRINFVHFRNVKYLGEHRFEETAHPSVAGSLDMAE LMQALVDVGYEGVIRPDHGRAIWDEKAMPGYGLYDRAMGLTYIQGLYEATKAKQNRK >gi|237663592|gb|GG668926.1| GENE 131 138310 - 138963 727 217 aa, chain + ## HITS:1 COG:VC0285 KEGG:ns NR:ns ## COG: VC0285 COG0800 # Protein_GI_number: 15640313 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Vibrio cholerae # 12 197 5 190 201 137 39.0 2e-32 METKVEKNQLYQQLATCKLLPLYTATDLRYLPQVESVLVENELPFIEVTFRSQLALPAIK QLAASGNLIVGAGTVRTLKEAQEAVANGAQFIVSPAIVPEVIDFCLANEVPIFPGTATPG EIQRALAYGLRVVKFFPADIYGGLKAIKSLSGPFYDVQFLPTGGIDETNFIEYVEAKEVL AVGGSFILSEKMLQEDEASARQHVQSLFTKIKERQAK >gi|237663592|gb|GG668926.1| GENE 132 139136 - 139606 590 156 aa, chain + ## HITS:1 COG:lin2984 KEGG:ns NR:ns ## COG: lin2984 COG4405 # Protein_GI_number: 16802042 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 4 149 7 151 153 103 38.0 2e-22 MLKNVEVFWQNFLDKHELDMLMPDVWMFGDGSSEMGNRLGQLVVSGRKTATCSSLDIYKM EEEQLPKAGQYDIILDGQSQPLAIIRTTKVEIMPMNKVSESFAQAEGEGDLTLDYWYEEH VRFFKEELAPYQLQFYPDMLLVCQSFEVVDLYTEKE >gi|237663592|gb|GG668926.1| GENE 133 139782 - 140000 415 72 aa, chain + ## HITS:1 COG:L114363 KEGG:ns NR:ns ## COG: L114363 COG4443 # Protein_GI_number: 15672295 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 1 69 1 69 72 84 62.0 6e-17 MKEEFSYEILEEVAVLSENARGWRKELNLISWNGRPPKFDLREWAPDHEKMGKGITLTNE EFAELSKTIKSM >gi|237663592|gb|GG668926.1| GENE 134 140017 - 140901 1109 294 aa, chain + ## HITS:1 COG:lin1942 KEGG:ns NR:ns ## COG: lin1942 COG1561 # Protein_GI_number: 16801008 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Listeria innocua # 1 294 2 291 291 182 38.0 5e-46 MKSMTGFGKKTIQNENYQLDIEVKSVNQRFLDIQLRMPKELNAYELVIRQVIKRTLKRGR VEVYVNLQKIGNNQKEVRVQWDLIDQLLTSVDQHLKENYPEATFDAGDTVNHLLKQNDFV EIVEAEIADQTFEPFLVQAFEAAIASLDQSRVQEGTQIKQVLLDYVAVLTQSIQELQAFV GVFEQEYRQRFEAKLNEWLGSQVDETRLLTEMAILLEKGDIHEELDRLDIHIDKLHQLLD ETEPVGRELDFLIQEMNREVNTIGSKSSPIEIKNSVVQMKTTLEKIREQIQNVE >gi|237663592|gb|GG668926.1| GENE 135 140957 - 141262 456 101 aa, chain + ## HITS:1 COG:no KEGG:EF3130 NR:ns ## KEGG: EF3130 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 101 1 101 101 181 100.0 9e-45 MTEVKAMTKFYDVTFQELSGRSVVKTEVASDREPFDVWQDACASYSETELNIQINEDTFV TLNRHFVVRIDVKEVDGPVDKQVRRRDELMNVVNTLSNMGL >gi|237663592|gb|GG668926.1| GENE 136 141305 - 142786 1570 493 aa, chain - ## HITS:1 COG:SA0598 KEGG:ns NR:ns ## COG: SA0598 COG1686 # Protein_GI_number: 15926319 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Staphylococcus aureus N315 # 33 415 20 400 431 228 37.0 3e-59 MNKKGLRNIARIKPFTLFLLGLVVSYGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPK AAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDI SKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAE LGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITN KPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLI EVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGV VPKGSQPTFKLVAGQVQVDTPLTLLNSTVQAPKVAYQEVKPKQTTAEAAEESNEHSGDTT VAEPNHFIPKSIATSVLVLFGLIFSVITRQLQKRLERQKKHGKESSKTAAMRTIFLSAAV LSFLCAVGLFLLF >gi|237663592|gb|GG668926.1| GENE 137 143009 - 143623 803 204 aa, chain + ## HITS:1 COG:SP1738 KEGG:ns NR:ns ## COG: SP1738 COG0194 # Protein_GI_number: 15901570 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 201 1 201 208 286 72.0 2e-77 MSERGLLIVLSGPSGVGKGTVRKAIFDSEENDFQYSISMTTRKQREGEVDGVDYYFRSRE EFEAMIEAGEMLEYAEYVGNYYGTPLTYVNQTLDEGKDVFLEIEVQGAKQVKDKVPDGVF IFLTPPDLAELKSRIIGRGTDEMSVIEERMAVAREEIEMMALYDYAVVNDEVPLAVQRIK DIIASEHFRVDRVIGKYIKMLEEM >gi|237663592|gb|GG668926.1| GENE 138 143628 - 143930 480 100 aa, chain + ## HITS:1 COG:SPy1630 KEGG:ns NR:ns ## COG: SPy1630 COG1758 # Protein_GI_number: 15675506 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Streptococcus pyogenes M1 GAS # 2 81 1 79 104 73 61.0 6e-14 MMLKPSIDSLLKEVPSKYSLVILASKRAHELDEGVQPTVESFDSVKSVGRALEEIEAGTV ISDPNPEEKRERLRIEREERKRQREQEQKELENRLRDEKN >gi|237663592|gb|GG668926.1| GENE 139 144080 - 144226 156 48 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517267|ref|ZP_03947316.1| ## NR: gi|227517267|ref|ZP_03947316.1| hypothetical protein HMPREF0348_0250 [Enterococcus faecalis TX0104] hypothetical protein HMPREF9505_02271 [Enterococcus faecalis TX0109] hypothetical protein HMPREF0348_0250 [Enterococcus faecalis TX0104] hypothetical protein HMPREF9505_02271 [Enterococcus faecalis TX0109] # 1 48 1 48 48 76 100.0 8e-13 MSISTEIYERGKPYLSALDVIGLIFDFGLYTIALISLVVTLLKKDKKK >gi|237663592|gb|GG668926.1| GENE 140 144572 - 147004 2566 810 aa, chain + ## HITS:1 COG:lin1938 KEGG:ns NR:ns ## COG: lin1938 COG1198 # Protein_GI_number: 16801004 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Listeria innocua # 1 806 1 793 797 867 54.0 0 MQKVAKVIVDVPTMQTDQPFTYLVPENLNEQLAVGMRVEVPFGNGNRHVQGFVLAIEPMA ATVLDEANVQLKELVAVLDLKPVLNTEMLALADYMKEKTFAFKITCLQTMLPSVMRADYQ KYIYLTDELSEELQDQLFYGLEEISWDQAQERGILPQLMALRKQQKVDIRYEVTTRNKVK IVRFIQAAKEFEQLEEIRLGLRKGAKKKEQLLYYLQRLGTEKITAVKEMKELGFSTALLN EAAKNGWLTFIEKEAYRDPFANQTFEKTTALSLNAEQQVAVETILQSVQEQQSQTYLLEG ITGSGKTEVYLQVIAEVLNQGKTAIMLVPEISLTPQMVQRFKSRFGEHVAVMHSGLSQGE KYDEWRKIERGEAEVVVGARSAIFAPIENIGVIIIDEEHEASYKQEETPRYHARDLAIWR SEYHHCPVVLGSATPSLESRARAQKNVYQRLRLTQRANQAATLPTIDVVDMRQEVENGNV SSFSMSLQEKLQERLEKNEQSVLLLNRRGYSSFVMCRDCGYVLPCPNCDISLTLHMDSKT MKCHYCGHEERIPYRCPNCGQDKIRYYGTGTQKVEEELQTLLPDSRILRMDVDTTRRKGA HEKILRTFGEGQADILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERTFQLLTQ VSGRAGRAEKPGEVIIQSFNPEHYAIQLAKAQDYEDFYTKEMYIRHRGNYPPYYFTVQIT ASHPEENEAAKQMFQIATKLKQGLSPQAILLGPTPNAIMRVNNRYFYQVIIKYKQEPMLQ PLLKEILTDTQRATARGLKLSIDAEPMNFI >gi|237663592|gb|GG668926.1| GENE 141 147031 - 147525 639 164 aa, chain + ## HITS:1 COG:BS_def KEGG:ns NR:ns ## COG: BS_def COG0242 # Protein_GI_number: 16078635 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Bacillus subtilis # 5 159 6 159 160 138 52.0 4e-33 MRYPVVIHPNEHLKMKAQPVTIITDEIVQLLEDMYETMLAHDGIGLAAPQIGKNLQMAVI EIDEESGRFELINPVIIEKKGTSIDVEGCLSIPETYGTVERADEVTVRYFDREGEEMEVT AYGYLARAFQHEIDHLNGELFIDKMIEKIAPEDLEAYMEEHFDD >gi|237663592|gb|GG668926.1| GENE 142 147518 - 148459 1261 313 aa, chain + ## HITS:1 COG:BS_fmt KEGG:ns NR:ns ## COG: BS_fmt COG0223 # Protein_GI_number: 16078636 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Bacillus subtilis # 1 301 1 301 317 338 56.0 8e-93 MTKIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLV LQPEKISGSPEMEKVIDLAPDVIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAP VHYSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLLET LPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTYQG TNWKIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLTIQEFLN GVGQNVAEKDKVD >gi|237663592|gb|GG668926.1| GENE 143 148465 - 149844 1350 459 aa, chain + ## HITS:1 COG:BH2507 KEGG:ns NR:ns ## COG: BH2507 COG0144 # Protein_GI_number: 15615070 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Bacillus halodurans # 11 452 4 448 450 418 49.0 1e-116 MAEKIPKKLKRSVRYVALETIERVDKGGAYSNLLLNEMMTKSELSEKDGRLFTELVYGTI SRKLLLEYYLTPFVKKPQKVDNWVKNLLILSLYQLLYLDKVPDHAVINEAVEIGKRRGNP GIGKFVNGVLRAFQRNGAPSLAAISDPVDRLATEISMPRWLTEKLLAQLGEEETRQLGLS LFEKSHASGRVNTRFISREEALEELQETGIAAKESQLSPYGVVAEKGYLAGSELFINGCL TIQDESSMLVAPAMQIEPHHRVLDACAAPGGKTTHIATFLEAEAGGRVTSLDIHAHKIKL INENAQRLHVADVVQAEKLDARQVAEEFPAETFDRILVDAPCSGLGLMRRKPDIKYHKTA NDFQNLPKIQLEILESVAPTLKQWGIMVYSTCTITPEENQEVVAAFLAKHPEFEKIEIVA NENVQAVVKEQELVLYPHQYMTDGFFICCMRKVSSNEVK >gi|237663592|gb|GG668926.1| GENE 144 149846 - 150595 798 249 aa, chain + ## HITS:1 COG:SPy1626 KEGG:ns NR:ns ## COG: SPy1626 COG0631 # Protein_GI_number: 15675502 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Streptococcus pyogenes M1 GAS # 1 247 1 246 246 215 45.0 5e-56 MEINVQSDVGRKRNTNQDYANVFENQQHVTFAVLADGMGGHQAGDVASQMAVNNLGESWS NASVDSAEKSAQWLIQAIQKENEKIYERGQSKPEYLGMGTTVVGAILLPDSFVLANVGDS RAYLVRDQHMLQLTEDHSLVNELVKSGEITREMAANHPRKNVLTRSLGMPGTVEVDVTNH EWLPNDYLLLCSDGLTNMVPETKILEILETSDPLESKLSQLVAQANEAGGLDNITVLVIH FDEQKEENQ >gi|237663592|gb|GG668926.1| GENE 145 150592 - 152748 2299 718 aa, chain + ## HITS:1 COG:lin1934_1 KEGG:ns NR:ns ## COG: lin1934_1 COG0515 # Protein_GI_number: 16801000 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Listeria innocua # 4 282 3 281 342 388 70.0 1e-107 MIEIGKKLNGRYHIIGSIGSGGMANVYLAHDLILDRDVAVKVLRFDFQNDQAAIRRFQRE ALAATELVHPNIVSVYDVGEEDGLQYLVMEYVKGMDLKRYIQTHFPIPYSTVVDITQQIL SAVAMAHEHRIIHRDLKPQNILIDEHGTVKITDFGIAIALSETSITQTNTMLGSVHYLSP EQARGSMATNQSDIYAVGIILYEMLTGNVPFDGESAVTIALKHFQEEIPSVKMFDPGIPQ SLENVVRHATAKDPSDRYKTANEMAEDLYTSLSASRLNEPAWEPTALLGETKVLTPIPED IAEPEETTPVEVPEDTADDILAEQPPKKNRKKLWIGLAIAALIALAIGGLAFAMSGGKDV EVPDVTNETKAAASQALQSAGLKVDSETKKIPDDKIEEGKVVKTDPEAKSSVKKGRSVTL YISSGTEKIEMADYTKESYESAVEALKKLGFSEDQITTKKEYSNSVSTDNIIKQKPAAGK KVDPKKDNVTLTVSEGPEAVTLPSYAGYSYTNAVNALAQLGISESQITRVDQASDTVEPG LVITQDPAPGGTVVPKNGQVTLYVSKGSDKVTLSDYSGISYDNAVSRLIALGIPESQIKR VDEESDKVEKDTVISQEPASGTAVDPKNDTITLHVSKGSDSVTVPDISGYSPKAAEDSIN NAGLKINEQGLSGSGDGQVVERTSPSAGSKVKKGDAVTVYYSKANDSKSTTSESSTSN >gi|237663592|gb|GG668926.1| GENE 146 152997 - 153890 826 297 aa, chain + ## HITS:1 COG:lin1933 KEGG:ns NR:ns ## COG: lin1933 COG1162 # Protein_GI_number: 16800999 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Listeria innocua # 4 293 2 291 291 326 53.0 3e-89 MVYLKGQIRKALSGFYYVYADGETYQTRARGNFRNRKITPLVGDEVLFESDNLTDGYVLE ILPRRNELVRPPVANVDLGVVVMSMVSPNFSFNLLDRFLVSLEYKDIEPVIYLTKVDLLD EPQRQEVTEIKQIYEALDYAVIASEDVEATKELERFFPERLTVFMGQSGAGKSTLLNQIS PELQLATAEISQSLGRGKHTTRHVELIPLYDGLVADTPGFSAIDFLEMEAVELPKQFPEF VAAASHCKFRECMHHKEPGCEVKRQVEAGTIATSRYENYLQFLMEIENRRPVYKKKS >gi|237663592|gb|GG668926.1| GENE 147 153914 - 154567 970 217 aa, chain + ## HITS:1 COG:lin1932 KEGG:ns NR:ns ## COG: lin1932 COG0036 # Protein_GI_number: 16800998 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Listeria innocua # 2 215 3 216 218 272 64.0 3e-73 MKLAPSILSADFANLERDIRLVEELGADYIHVDVMDGQFVPNITLGPNIVSAIRPVTKLP LDVHLMIVQPENYINAFAEAGADIITVHQEATPHIHRALQMIKNAGVKAGVTINPGTPLS MIENVLDLADQVLVMTVNPGFGGQSFIENSLEKIAQLKEWKETKGYTYEIEVDGGIVPET AARCKEAGAEVFVAGSYIYNAENPQERIDALRAVLDK >gi|237663592|gb|GG668926.1| GENE 148 154564 - 155208 527 214 aa, chain + ## HITS:1 COG:SPy0265 KEGG:ns NR:ns ## COG: SPy0265 COG1564 # Protein_GI_number: 15674445 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Streptococcus pyogenes M1 GAS # 1 213 1 208 210 176 45.0 4e-44 MSRVLLVAGGNPSDWPTIEPATYDYFVGIDRGCLHLLEADLPLQLAVGDFDSLSREEYHF VQETAETLIQAPAEKDDTDTQLALQEALQRFPQAEMTIIGATGGRIDHLLANLWLPFEPR FQGVLRQIRLCDRQNSIQYYAPGSYIVQKEPDKEYLAYCCLTPVENLTLRRSKYLLTNQD VPYPTSYASNEFIEEAAAFSFDAGMIAVIQSKDK >gi|237663592|gb|GG668926.1| GENE 149 155310 - 155498 318 62 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|29377572|ref|NP_816726.1| 50S ribosomal protein L28 [Enterococcus faecalis V583] # 1 62 1 62 62 127 100 7e-28 MAKVCYFTGRKTSSGNNRSHAMNSTKRTVKPNLQKVRVLIDGKPKKVWVSTRALKSGKIE RV >gi|237663592|gb|GG668926.1| GENE 150 155707 - 156462 419 251 aa, chain + ## HITS:1 COG:CAC0081 KEGG:ns NR:ns ## COG: CAC0081 COG3279 # Protein_GI_number: 15893377 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 1 239 1 239 241 114 29.0 2e-25 MIEIIICEKQKRRREWLEKWIPRLILIEKFEMKIVLSVNEGSEVITYIQKNPLKPRLIFW GIEENEDVHSLEAAIAVRQLDDGFSKLVFLASNPCFLRKSYDYKLEAMDFITETEKERLK KRVHECIRVANQRFKQINLFRGTVQLIEKHQIRTVDLSEILYLESSDIPHKIVIHRATEY FEIYGTLRDFEKEFEILCRCHQSFLVNLNHIKQVSIKDRLVRMSNEDICLVSVRGMKQLK LKLIERNIKYK >gi|237663592|gb|GG668926.1| GENE 151 156558 - 156839 187 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517279|ref|ZP_03947328.1| ## NR: gi|227517279|ref|ZP_03947328.1| hypothetical protein HMPREF0348_0262 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis AR01/DG] hypothetical protein HMPREF0348_0262 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis ARO1/DG] hypothetical protein HMPREF9499_00886 [Enterococcus faecalis TX0012] # 1 93 1 93 93 140 100.0 2e-32 MKRKQLKIIVAMFLLVGLSLFYSGRKVEAASMATTVKSSMVYNYNLAGNIFRIDNYWRTI YYNQYCYRSGQGTYWGSNGIYKTKTTAYYYSYR >gi|237663592|gb|GG668926.1| GENE 152 156927 - 157448 179 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 172 1 187 245 73 27 5e-13 MIELDNISKRYGNNEVLKNVTLSIDKGKLISFVGPNGAGKSTLLKIIAGMAPVDEGTVHL AGTKVSNTFDVVGKVSFFLNDTILVDGLSGEEHLLLLNETQLQKAYELLAYYAVPEILKK KVGNYSLGMRQLLLIVLAVSLDTPIIIFDEVMNGLDPINRRKTIQLMKKLKKN >gi|237663592|gb|GG668926.1| GENE 153 157459 - 157611 140 50 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315150890|gb|EFT94906.1| ## NR: gi|315150890|gb|EFT94906.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0012] # 2 50 179 227 227 96 100.0 8e-19 MSSHQLYDVRDISDRIAFVYDKKVEIYSNKSELDLNQLYENLIEGGAHEI >gi|237663592|gb|GG668926.1| GENE 154 157566 - 157739 98 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLFSLFIANVPTILIAENNCKVHNKKKQLQGCYFFYFSNFSTIQISWAPPSIKFSYN >gi|237663592|gb|GG668926.1| GENE 155 157705 - 158751 659 348 aa, chain + ## HITS:1 COG:no KEGG:L69089 NR:ns ## KEGG: L69089 # Name: ywiH # Def: ABC transporter permease protein # Organism: L.lactis # Pathway: not_defined # 8 304 57 350 394 103 29.0 1e-20 MGTFAINSENSIKENITILSEEIKTAKNDEQQASIDHKTKQFIQEYIASTEKILNLLEKQ LDSLATKNYKTYWNLESKKKDILLNSQSVQGQDSLQERIRLENDQLLITELNKRKLDFET DLGLPIRAFPFLIGLCQFLSSVLVIILFIVLMGDSLSRDFENKSFYLYAPVLQGFKQLIL KKNLSNTFLSFALLLGSAGLVFLVAGILNGFNTGDYPLIIGNEQLGYSTITVWELIFRFI PYYLMVIFFLSSFLTMISALVKKSLASIGIVIISYFGYTLVAQSELLTNVKKFIPYSYID IFKVVTLQELQMPQNVYLVGFIILGACAMAFNYLTAVFLNNVKIFERM >gi|237663592|gb|GG668926.1| GENE 156 159000 - 159362 611 120 aa, chain + ## HITS:1 COG:lin1929 KEGG:ns NR:ns ## COG: lin1929 COG1302 # Protein_GI_number: 16800995 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 120 1 120 121 142 64.0 1e-34 MAVKIQTPAGTIEITNDVIATVVGGAATDIYGIVGMASKNQIKDNLNDILRRENYSRGVV VRQEDNGIAVDVYTIVSYGTKISEVSRNVQEKVKYNLETLLGVTANSVNVFVQGVRVLPD >gi|237663592|gb|GG668926.1| GENE 157 159445 - 161121 2298 558 aa, chain + ## HITS:1 COG:SP0443 KEGG:ns NR:ns ## COG: SP0443 COG1461 # Protein_GI_number: 15900360 # Func_class: R General function prediction only # Function: Predicted kinase related to dihydroxyacetone kinase # Organism: Streptococcus pneumoniae TIGR4 # 3 558 1 555 555 644 62.0 0 MNVTEISAGQFQEMVQAGATRLHTNAEYVNSLNVFPVPDGDTGTNMNLSMTSGAKAVADS RSEKVGELAGALSKGLLMGARGNSGVILSQLFRGFSKQIPEVTTLNAKDLAAAFTHGVET AYKAVMKPVEGTILTVSREAARSGERKAKETDDCIEVMTAVVAGAKRALAKTPDLLPVLK EVGVVDSGGQGLLFIYEGFLEALSGEFLPTETYEPSPAEMDEMVNAEHHRGVSGHVATED IKFGYCTEIMVRIGEGPTVDSAFDYETFRNYLNELGDSLLVVNDDEIIKVHVHTEHPGEV MNYGQKFGSLVKIKVDNMRLQHETLVERDAQQEALTEKVRVPFAVIAIAAGEGVQELFRS LGASYIISGGQTMNPSTEDILKAVKEVNAEQVIILPNNKNIFMAADQAAEVADVPVAVVP SKTISQGMTAMLAFNDQQSLEENKASMTEMLDSVVSGQVTTAVRDTTIDDVEIKKDDFLG MIDGKIVVSEADRFNASLDTLNRMIDEDTEIVTIIVGEDGSVEEAEKLIAILVSENDELE TELHEGGQPVYPYLFSAE >gi|237663592|gb|GG668926.1| GENE 158 161237 - 163273 2093 678 aa, chain + ## HITS:1 COG:SPy1785 KEGG:ns NR:ns ## COG: SPy1785 COG1200 # Protein_GI_number: 15675625 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Streptococcus pyogenes M1 GAS # 1 671 1 668 671 758 56.0 0 MDITDLVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSEIQDQEKVTLK GLVVSEAVVSRYGYKKSRLTFRMMQEHAVINVSFFNQPFLKDKVVLSEEIAVYGKWDAKR KSLNGMKILASKGDNEDFSPIYHVNKKVRQSTLVQLIRTAFEEYGSLVEEILPNDLLEKY RLMPRKEAMWAMHFPSNPEESHQAKRRVVFEEFFLFQLKMQGLKKQEKAEKNGLAIQYDV DRLKTFTQGLPFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMT AGFQGALMVPTEILAQQHMESLQQLFDPLEVRTALLTGSTKTKERRLILEELANGEIDIV VGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREKGLKPDVLFMTATPIPRTLAITA YGEMDVSIIDEMPAGRIPIETRWIRPPQLDTVLEWMEKELARGHQAYIICPLIEESEALD VKNATEIFEHMQSFYSPRYQVGLLHGKMKNQEKDDIMQEFKDNQLQLLVSTTVIEVGVNV PNATVMLIMDADRFGLAQLHQLRGRVGRGSSASYCILVANPKNEMGVERMKIMTETTNGF VLSERDLELRGPGEVFGARQSGVPQFAVGDIVTDFNILEVARQEASALWQVKEWWQYPAY QALANRVKPQDEAAQFFD >gi|237663592|gb|GG668926.1| GENE 159 163376 - 164377 1245 333 aa, chain + ## HITS:1 COG:SP0037 KEGG:ns NR:ns ## COG: SP0037 COG0416 # Protein_GI_number: 15899983 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Streptococcus pneumoniae TIGR4 # 2 331 3 330 330 428 70.0 1e-120 MKIAVDAMGGDNAPQAIVEGVMLAKQDFPDIEFQLYGKEAEIKKYITDEKNITIIHTDEK IASDDEPVKAIRRKKTASMVLAAQAVKNGEADAIFSAGNTGALLAAGLFIVGRIKNVERP GLMSTLPVMGEPDKGFDMLDLGANADNKPEHLVQYAVLGSFYAEKVRNVQNPRVGLLNNG TEETKGSELTKKAFELLAADETINFVGNVEARELLNGVADVVVTDGFTGNAVLKSIEGTA MNMMSLLKTAILSEGVKGKMGALLLKNALRGMKDEMDYSKHGGAVLFGLKAPVIKTHGAT GPDAVRYTIRQIHTMLETQVVPQLVEYYEGKAE >gi|237663592|gb|GG668926.1| GENE 160 164514 - 164753 431 79 aa, chain + ## HITS:1 COG:lin1920 KEGG:ns NR:ns ## COG: lin1920 COG0236 # Protein_GI_number: 16800986 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Listeria innocua # 5 79 3 77 77 61 57.0 5e-10 MTREEVLQKVAKIISNHFDIEADQVTDQLNIKDDLNADSISVMEFVLELEDEFGTEISDE DAEKIETVGAAVDYIVSNS >gi|237663592|gb|GG668926.1| GENE 161 165050 - 166057 601 335 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 4 324 8 328 329 236 40 1e-60 MQGNEQLLEVSGLETAFRIKDDYYNAVDDVSFELKKNEILAIVGESGCGKSTLATTIMGL HDPNHTKITGEILYNNLNLTTFNETLYNKVRGNDIGMIFQDPLSALNPLMRIEDQIKESL TYHTKMTAQQKQARAIELLDQVGIPNPERVGKQYPHELSGGMRQRVIIAIAIACKPPILI ADEPTTALDVTIQAQILDLLKDLQEETGSGIILITHDLGVVAEMADRVAVMYAGQFVEVA TAEELFSHPKHPYTRSLLQSIPQENSDEEELHVIEGIVPSLTKLPRKGCRFAPRIPWIDA SEHEENPTLHEVAPNHFVRCTCYKHFHFRDGEGEA >gi|237663592|gb|GG668926.1| GENE 162 166057 - 167001 1069 314 aa, chain + ## HITS:1 COG:L92192 KEGG:ns NR:ns ## COG: L92192 COG4608 # Protein_GI_number: 15673822 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, ATPase component # Organism: Lactococcus lactis # 1 312 1 312 319 415 64.0 1e-116 MTEIIQIKDLKVHYPIRSGFFNRITDHVLAVDGVDFMIEQGKTYGLVGESGSGKSTTGKA IIGLEKITNGEIIYQGQDVTKPRSRKAIGYNKDVQMIFQDSMSSLNPKKRVLDIIAEPIR NFERLSDQEEKKKVKSLLDIVGMPEDALYKYPHEFSGGQRQRLGVARAVATSPKLIIADE PVSALDLSVQAQVLNFMKNIQQEYGLSYLFISHDLGVVKHMCDNIAIMYKGRFVEIGTRQ DIYTNPQHIYTKRLLSAIPKIDVANREAHKEERRRVEQEYRENHKDYYDENGRVYDLHAI SPTHQVALKNGGAE >gi|237663592|gb|GG668926.1| GENE 163 167001 - 167963 1071 320 aa, chain + ## HITS:1 COG:BH3638 KEGG:ns NR:ns ## COG: BH3638 COG0601 # Protein_GI_number: 15616200 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 1 320 1 322 322 348 51.0 5e-96 MWKTILRRLLLMIPQVIILSVLIFLLAKMMPGDPFTGLINPNQDPKVIEAMREAAGLNDP WYEQYFRWIGNALHGDFGHSFIFKLPVSTLIAGRVGNTIALAAVSVIITYLIAIPFGLIA GRYQNSWFDKMVVIYNFFSFAVPLFIFALIMLFIFGYRLDWFPTSGTVTVGLAEGTWPYY LDKLKHLILPGVTQALLGTAVTIQYLRSEVIDVKNMDFVRTARSKGVPTNKIFNRHIFRN AALPIASQLGYEITALIAGSVVIEKIFAFPGIGKLFIDSIIQRDYSVITALVLILGLATL IGTLISDIVMSIVDPRIRIQ >gi|237663592|gb|GG668926.1| GENE 164 167991 - 168914 995 307 aa, chain + ## HITS:1 COG:BH3637 KEGG:ns NR:ns ## COG: BH3637 COG1173 # Protein_GI_number: 15616199 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 18 307 19 302 302 301 57.0 8e-82 MELTEEKREEVLQESIPPMGFRMIAREFVKEKMAMFSLILLVIILLAVFIGSLVLDQSAV MHVSILDKYAEPGTVTMNGTKFILGADEGGRDVLGQLIIGARNSILIGFAITIITSIIGV GLGIISGYYGGMIDNILMRIVDFIMILPIMLIIIVFVSVIPKYSIWSFIWIMCAFYWVGK ARLFRSKTLSEGRRDYVSASKTMGTSDFKIMFREIMPNLSSLIITNLTINFAANIGIETT LTFLGFGLPQSVPSLGTLIGYASSGDVLVNKQWVWLPASILILVLMLSINYVGQAFKRSA DARQRLG >gi|237663592|gb|GG668926.1| GENE 165 168943 - 170724 2294 593 aa, chain + ## HITS:1 COG:BH3636 KEGG:ns NR:ns ## COG: BH3636 COG0747 # Protein_GI_number: 15616198 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Bacillus halodurans # 45 575 64 588 610 498 47.0 1e-140 MNKKRILGAITLASVLVFGLAACGGGNKGGGNKATETEDISKMPIAVKNDKKAIDGGTLD VAVVMDTQFQGLFQQEFYQDNYDAQYMLPTVQPLFNNDADFKIVDGGPADLKLDEDANTA TIKLRDNLKWSDGKDVTADDVIFSYEVIGHKDYTGIRYDDNFTNIVGMEDYHDGKSPTIS GIEKVNDKEVKITYKEVHPGMQQLGGGVWGSVLPKHAFEGIAVKDMESSDAVRKNPVTIG PYYMSNIVTGESVEYLPNEYYYGGKPKLDKLVFKSVPSASIVEAMKAKQYDIALSMPTDT YPTYKDTEGYQILGRPEQAYTYIGFKMGTFDKETNTVKYNPKAKMADKSLRQAMGYAIDN DAVGQKFYNGLRTGATTLIPPVFKSLHDSEAKGYTLDLDKAKKLLDDAGYKDVDGDGIRE DKEGKPLEIKFASMSGGETAQPLADYYVQQWKEIGLNVTYTTGRLIDFQAFYDKLKNDDP EVDIYQGAWGTGSDPSPTGLYGPNSAFNYTRFESEENTKLLDAIDSKASFDEEKRKKAFY DWQEYAIDEAFVIPTLYRNEVLPVNDRVVDFTWAVDTKDNPWATVGVTADSRK >gi|237663592|gb|GG668926.1| GENE 166 171103 - 171318 196 71 aa, chain + ## HITS:1 COG:no KEGG:EF3105 NR:ns ## KEGG: EF3105 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 71 1 71 71 128 98.0 8e-29 MPLYMENYLLALQSKYSQEITVKWVWAVVILLSVIGCIGYAVYCSWVGGTFARSIKIGVP DLVHVTFNCKR >gi|237663592|gb|GG668926.1| GENE 167 171372 - 172097 445 241 aa, chain + ## HITS:1 COG:AF0393 KEGG:ns NR:ns ## COG: AF0393 COG1131 # Protein_GI_number: 11498005 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Archaeoglobus fulgidus # 1 234 1 231 241 98 27.0 1e-20 MIRIENLTKKFDRKVLDNITISLPKNRVSVIVGINGSGKTTLLDCIVGLKDATSGKVFIE SYSNDSEKFKECIFYIPSEFYLPNYMTGKEYLNFVLSRYRCSDTERIDDFLELFDLKFAG TNLIESYSFGMKKKIQIVAAALANTDYILGDEIFNGLDFETTLLTLELFENLSREVGIVI ISHNKLIIERFSENILLMSNGNLTPFLGASENLEKEVISTEKIHEKIKYIKGYHPINRVI Y >gi|237663592|gb|GG668926.1| GENE 168 172042 - 173400 513 452 aa, chain + ## HITS:1 COG:no KEGG:EF3103 NR:ns ## KEGG: EF3103 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 56 452 1 397 397 563 99.0 1e-159 MKKLNTSKDIILLIELFIDNALRGLLKHSILSKKSTRIVIGVCVFFIYFAYFFYNMSELA RIVPDSEKISHILIEQGRKITFYSYFSNTFVLGIIAYILVDNTVALDKNSLFFVKTLPFR KKDISLSFMLFKFVIMILLYELVMIISTPAIKLVTTVPIEYVIFFIVQHLFYLVVIGVIE FIHCLFAFFLKRRVKQINSLKVIGDSLLMIFATFYFFDFRYGLELFLANQLWSISYMIPI TFFLIVVCLMLISIGLLRLISILENQMSQHSKYIYIPFLNKVIFRYKANWYFISFTTVVM LVIFFQSGLRTMLFILTTVMAFSGVLLLSYGDITADFRKQYDLLRIKIRNEWLSQLLLVI MLAMPLLLLCFWGFGELAQLITALSLSLVAIILGYVFPKSQGSLNETTSLLLLFIVFVLV SLLTNRSFGWLILIVLVLLHLLVIKKVRNEKE >gi|237663592|gb|GG668926.1| GENE 169 173387 - 173653 259 88 aa, chain + ## HITS:1 COG:no KEGG:EF3102 NR:ns ## KEGG: EF3102 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 88 1 88 88 100 100.0 1e-20 MKKNSKYLGSITVIYLLVLVIETLWELFHTSRTESTKVTTLLGITIDNRISKHEISTTFG LTIKVLVLYLLLLLVVYILTGLFGKKKI >gi|237663592|gb|GG668926.1| GENE 170 174006 - 174524 435 172 aa, chain + ## HITS:1 COG:no KEGG:EF3099 NR:ns ## KEGG: EF3099 # Name: not_defined # Def: transporter accessory protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 172 1 172 172 323 100.0 1e-87 MKKRKVFIIFLVSLIIFVFGYYLAFNQNKYVSYNDETKQFVHTDTSKIMENLVNRQQGIY YFGFPTCPWCLELLPILDKELEKESMNAYAVNTRGDDYTENDDELLQKFYQKYTGDESLS VPFIVAINNKKEVQVHIGTVKNHDATKTKLKRRQKEELSQSLNEMLIFSESE >gi|237663592|gb|GG668926.1| GENE 171 174529 - 174615 71 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLFLLSLAGTFIQKIPRKRCYVFSFFMG >gi|237663592|gb|GG668926.1| GENE 172 174779 - 175471 824 230 aa, chain + ## HITS:1 COG:lin1919 KEGG:ns NR:ns ## COG: lin1919 COG0571 # Protein_GI_number: 16800985 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Listeria innocua # 8 228 6 226 229 257 58.0 1e-68 MDNQLTTELKERYGIVFHDVNLLEQAFTHSSYVNEHRYLKLSDNERLEFLGDAVLELIVS QYLYLKFPELPEGKLTKMRAAIVREDSLAKFAKECHFDNYILLGKGEEASGGRTRASLLC DLFEAFLGALYLDQKVGAAKKFIEDVIFPKIDAGAFSHEMDHKTQLQEVLQRKGDVSIEY RLIKEEGPAHDRTFFTEVYMNGELIGLGQGKSKKLAEQDAAERALKSIPQ >gi|237663592|gb|GG668926.1| GENE 173 175492 - 179070 4358 1192 aa, chain + ## HITS:1 COG:lin1918 KEGG:ns NR:ns ## COG: lin1918 COG1196 # Protein_GI_number: 16800984 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Listeria innocua # 1 1184 1 1183 1186 874 47.0 0 MYLKRIEITGFKSFADKTIIEFEDDVTAVVGPNGSGKSNITEAVRWVLGEQSAKNLRGGK MNDIIFAGSEGRKPLNIAEVTVTLDNSDHYLALDYSEISVTRRLKRTGESDFFINKQACR LKDIQDLFMDSGLGKESFSIISQGKVEAIFNSKPEDRRGIFEEAAGVLKYKQRKKKAEQK LFETEDNLSRVQDIIYELEDQLVPLAAQADTAKKYLALKEELTEIDVNLTVTEIQEAKAI WETKTQELTAIEEKLADASKQVHDLEGKLVRLRSKRNRLDEQIETEQQQLLQVTEALKQA EGQKNVLIERSKHTSQTASEYEETLAETAEKIVRYREELQTLETAIAEKTAQRQTLKEAL ALATKDVEKYSKSSKELMEELRSQYVEVMQEQANTANDLKYLERQYQQETAKNQQSLAKH EALEEQMVEALAMKETLEKEQKVAKQGLQEQLEEYTALKATLEAKRERLARRQNDMYQAM NQVQQAKARQKSLQEIQENYAGFYQGVKAVLRHKNQLTGIVGAVAELIEVPKEYTLAIET ALGGAAQHIVVENEKDGRAGITFLKQQHSGRATFLPLTTIKPRSVSAMVQNRLAGAPGFV GIASELVRYPEQVQTVIQNLLGVTILAADLTSANQLAKLVNYQYRVVSLEGDVMNPGGSM TGGANKRGNQGSLFSQAQELQTITEQMTQLETQLRSVEQEVQALSQEVKTATERAEMLRS AGEQNRLKQQEIDNKLANQTETITRLTKEKRLFEYESRELHQFLTEYQTKKATLTEQQAN LTATKERLDAEMKQVEQEASQMETFKAQAQERLTTVQAEQAVAAEQCAHFARQKQDKQEQ LDELLIRETAIRQQLQQLSSHSSDHQLTEEGLAAQVAQLAEKQTALQTSLQTVRSQRQAL QEEVDELDTKLAEENKRQQQYLADKTQIEVLKNRAEMQLDSSLSYLQEEYSLTFEAAYEA YFPIDDLAQAQQTVKRLKQEIERLGPVNLSAIEQFEQVDERHQFLVSQRDDLLNAKEQLF ETMDEMDQEVKERFKEVFEAIRGQFKVVFPNMFGGGRAELVLTNPEDLLNTGIEIEAQPP GKKLQHLSLLSGGERALTAIALLFSIIRVRPVPFCILDEVEAALDEANVARFGHYLSEFE DGTQFIVVTHRKGTMEAADVLYGVTMQESGVSKIVSVRLEEVKEGGAIEKSN >gi|237663592|gb|GG668926.1| GENE 174 179095 - 179922 1108 275 aa, chain + ## HITS:1 COG:L22687 KEGG:ns NR:ns ## COG: L22687 COG0561 # Protein_GI_number: 15672793 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Lactococcus lactis # 2 268 5 269 269 245 50.0 8e-65 MIKLVAIDLDGTLLNSQKEISLRNKQALMAVKQAGVKVVICTGRPLAAIGPYLEELGLQD EGDYSITFNGGLVQKNDTGAIIEKTLMPLEAIHELYQLATTLKMPFDVLSDEVVMQLPSA PNYPSIYSSLNKLLTFESYKLEELTPNRIYNKVVVAIDEAYLNERIKEIPASFYERFEII KTRNNLLEFMPKGITKAYGISLLAKDLGIRAEEIMTLGDEENDLPMIEYAGLGVAMANAI PLVKEAADVVTDTNDQDGVAKAVEKYILTPLEGGQ >gi|237663592|gb|GG668926.1| GENE 175 179925 - 181253 1005 442 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 127 441 13 326 336 391 62 1e-107 MGFFDKIKKAFSAEKKEEEKQEIVEETVDETPSDESAPAESKETAAEEAQTTPETTAEEV AETADLTDNAEMEKLAGVEEALEEEPEEILTEETQEVVVEAPEEESSVVTPLTEPTDTQV SEEIEESKEEQVQEKYEKGLEKTRKTFGQRLNELFANFRSVDEDFFEELEETLIGADVGF DTSLKITEALRQEVKLRNVKKPAQVQNTIIEKMVDLYEEAGINENNAINLQPNGLTVILF VGVNGVGKTTSIGKLAHQYKLEGKKVLMAAADTFRAGAIDQLVVWGERAGVEVVRGNAGG DPAAVVFDAVERAKAEQADVLLVDTAGRLQNKVNLMKELEKIKRVIQREIPDAPHEVLLV VDATTGQNAMTQAKQFKETTDVTGLVLTKLDGTAKGGIVIAIRNELHLPVKLVGLGEGIN DLEPFNANDFAMGLFKGLLKDV >gi|237663592|gb|GG668926.1| GENE 176 181812 - 182297 692 161 aa, chain + ## HITS:1 COG:SP2081 KEGG:ns NR:ns ## COG: SP2081 COG3542 # Protein_GI_number: 15901897 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 7 155 2 150 153 154 58.0 8e-38 MTEQMWIEKLGLEAHPEGGYFKQTNKSEQLIPAKRGERALHTAILFLLNTESPSHFHRLK ADELWFFHDGQPLTVHCIFPDGTYQAVQLGKDLVQGQQLSLSVPAGTIFGSTVATGFALV SCVVTPGFEFEDFELFTQAELLNDYPQHSEIIQHLAYRELP >gi|237663592|gb|GG668926.1| GENE 177 182417 - 182815 465 132 aa, chain + ## HITS:1 COG:L151700 KEGG:ns NR:ns ## COG: L151700 COG3607 # Protein_GI_number: 15673301 # Func_class: R General function prediction only # Function: Predicted lactoylglutathione lyase # Organism: Lactococcus lactis # 1 130 1 130 137 161 60.0 3e-40 MGTMVFVNFPVADVQRSTAFYEKLGFKKNEEFSTEEASSMMWDDQFWIMLLNHDFYGKFI QEKQIIDAQTTSGALISFSLESAEAVKQFGETAKANGGNCYRVDMGIPEERMYGLEVQDL DGNSLEPVWMKM >gi|237663592|gb|GG668926.1| GENE 178 182866 - 183762 1090 298 aa, chain - ## HITS:1 COG:SPy2209 KEGG:ns NR:ns ## COG: SPy2209 COG1284 # Protein_GI_number: 15675941 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 8 282 3 277 290 231 49.0 2e-60 MNKFFTAQRLKDTAYVTVGAFILAISINAVLLPNKLVAGGANGISIVINYVFGISPAIVL YAINIPLLVLCFLLLGKEVGVKTIYGSLIYPFFVGITSGMPVLTHNIFLAALFGGIITGA GLGLVFRGNASTGGTAIISQIVNKYFKVSLGIAILFVDGLVILSAMYAFNADIVLFSLIC LFTIGRVVDMIQVGLVRSKNVMIISPKYVAIQERLLRELDKGVTLVPIEGGYRNAKGMLL MTVIREKDFPRLKEAILEIDEEAFLISMSASEVYGKGFSLKKVADSYGVEATNANNLQ >gi|237663592|gb|GG668926.1| GENE 179 183952 - 184458 492 168 aa, chain - ## HITS:1 COG:L125244 KEGG:ns NR:ns ## COG: L125244 COG1335 # Protein_GI_number: 15674036 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Lactococcus lactis # 5 164 18 175 176 134 43.0 6e-32 MKNRALLLIDFQKGIESPSQQLYRLPAVLEKVNQRIAVYRQHHAPIIFVQHEETELPFGS DSWQLFEKLDAQPTDFFIRKTHANAFYQTNLNDLLTEHDIQTLEIAGVQTEFCVDTTIRM AHGLGYTCLMTPKTTSTLNNGHLTAAQIIQHHEAIWAGRFLTFLPSIN >gi|237663592|gb|GG668926.1| GENE 180 184629 - 186899 2413 756 aa, chain + ## HITS:1 COG:PM1048_1 KEGG:ns NR:ns ## COG: PM1048_1 COG2918 # Protein_GI_number: 15602913 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Pasteurella multocida # 21 480 21 481 481 390 47.0 1e-108 MNYRELMQKKNVRPYVLMARFGLEKENQRSTREGLLATTDHPMVFGNRSYHPYIQTDFSE TQLELITPVANSGTEMLRFLDAIHDVARRSIPEDEMLWPLSMPPQLPTKDEEIKIAKLDQ YDAVLYRRYLAKEYGKRKQMVSGIHFNFEYDQALIQQLYDEQSEVTDCKQFKTKVYMKVA RNFLRYRWLITYLFGASPVSEDGYFRVYDDQPQEPIRSIRNSTYGYRNHDNVKVSYASLE RYLEDIHRMVENGLLSEEKEFYAPVRLRGGKQMSDLPKTGIRYIELRNLDLNPFSRLGIV EDTVDFLHYFMLYLLWTDEKEEADEWVKTGDIFNEQVALGHPHETIKLIAEGDRIFSEMI DMLDALGIRKGKEVVGKYYQQLRNPQDTVSGKMWTIIQENSNSELGNIFGNQYQSMAFER PYQLAGFREMELSTQIFLFDAIQKGLEIEILDEQEQFLKLQHGEHIEYVKNANMTSKDNY VVPLIMENKTVTKKILSAAGFHVPGGEEFSSFIEAQEAHLRYANKAFVVKPKSTNYGLGI TIFKEGASLEDFTEALRIAFKEDTAVLIEEFLPGTEYRFFVLDNDVKAIMLRVPANVTGD GKHTVEELVAAKNSDPLRGTNHRAPLELIQLNDLEKLMLKEQGLTIYSVPEKEQIVYLRE NSNVSTGGDSIDMTDVIDDSYKQIAIEAVAALGAKICGIDLIIPDKDVKGTRDSLTYGII EANFNPAMHMHVYPYAGKGRRLTMDVLKLLYPEVVQ >gi|237663592|gb|GG668926.1| GENE 181 187573 - 188025 529 150 aa, chain - ## HITS:1 COG:BS_yueI KEGG:ns NR:ns ## COG: BS_yueI COG5506 # Protein_GI_number: 16080228 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 124 1 122 132 71 31.0 6e-13 MANDDLQQRLDKGMYGTPLVNPEEQHKYMGTFRERCRLSMTVAEMKDAQNQQHLLEELAK HPEVTVLLNGEISSDLQSTYIKLLNQHGATFKIVNNFVENNPDSLGLLLAEKHAVDEPVI DVTEKYPQATETPKEEPKAKKGFWQKLFHS >gi|237663592|gb|GG668926.1| GENE 182 188127 - 188213 90 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVAFVMVFSYTVIKNENHSQLNKNGVFS >gi|237663592|gb|GG668926.1| GENE 183 188210 - 189157 951 315 aa, chain + ## HITS:1 COG:BH1025 KEGG:ns NR:ns ## COG: BH1025 COG4606 # Protein_GI_number: 15613588 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Bacillus halodurans # 1 314 1 314 317 278 51.0 9e-75 MKKIGLFVLLLLFSLLSLVIGVKDIALSQLFQLDAQQQFVLFTTRVPRTLSLIIAGSTMS ISGLIMQQLTQNKFVAPSVAGTTDSARLGILVAMLFFPTAPFLYRTAIAFIFALSGTLLF LALIRLLPSKNQVMVPLVGVMFGNILGSIATFFAYQYQLVQNMSAWLQGNFSTVMKGNYE WLFLMIPLWFVIYLFAYHFTVVGMGEAFANSLGVHYQRIQFLGLTLVALASAIVLLMVGN IPFLGVVIPNLVSLHYGDHMKNTLWLTGSCGSLFLLICDILARVLIAPYEIPVSVVVGTL GSILFILLLLRGRKR >gi|237663592|gb|GG668926.1| GENE 184 189154 - 190119 637 321 aa, chain + ## HITS:1 COG:BS_yclO KEGG:ns NR:ns ## COG: BS_yclO COG4605 # Protein_GI_number: 16077449 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Bacillus subtilis # 12 318 7 313 315 209 42.0 5e-54 MKRPLKKWLSLLLLLAAVVIVSLCYLTYNTYGNWSFALALRGKKLLAFIFVGIAAAFSTI SFQTVTQNHFLTPNILGMDSLYVFVQTVLFFLLGGAQALGQVSLGSFLMNVFLMVFLSTS LSYFLLRKNQSDLFLLLMIGMILGTFFSSISTFLQVIMDPNEYDLLQGKLFASFGNVNSQ YLVFVGVAVLMICGILWRESYRLDVLHLGNHQAQNLGIAVNQFQLVLLCLISSLVGLSTA LVGPITFLGFIVANMSYQFMKTYRHRELFVAGSLIAVFLLVFGQLMVEQVFHLNTPLSVV IQFVGGIYFIWKIIAERKQRT >gi|237663592|gb|GG668926.1| GENE 185 190116 - 190871 274 251 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 223 1 226 245 110 29 8e-23 MIQMSDVSKKYGDKFVVSDIDLPISEGKLTAFIGPNGAGKSTLLAMMSRLIPKDTGEIYL DKQEVKTWKQSAFSQKIALLKQANGVQLKLTVRELVNFGRFPYSKGRLKSADHEKVTEAL EQLGLTEMAEEYIDTLSGGQLQRAYIAMILAQDTDYILLDEPLNNLDMNYAVQMMQILKR LVDELGKTILIVLHDINFAASYADEIVAMKGGKLYAHGATEEVIQTSILNDLYEMNIRIC EIEGKRFCLYH >gi|237663592|gb|GG668926.1| GENE 186 190910 - 191863 1240 317 aa, chain + ## HITS:1 COG:BS_yclQ KEGG:ns NR:ns ## COG: BS_yclQ COG4607 # Protein_GI_number: 16077451 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, periplasmic component # Organism: Bacillus subtilis # 3 317 2 316 317 270 48.0 4e-72 MKKKFLAMMAVSMMGLLMLSACQTNKKTADSATTETAAKTEVTVKDTNGQLTVPKNPKKV VVFDNGSLDTMDALGVGDRVVGAPTKNIPAYLEKYQKVESAGGIKEPDLEKINQLKPDLI IISGRQQDYQEQLKAIAPTIYLAVDAKNPWASTKQNIETLGTIFGKEEVAKEKITGLEKE IADVKKQAEASANNALVVLVNEGQLSAYGKGSRFGLIHDTFGFKAADDKIEASTHGQSVS YEYVLEKNPGILFVVDRTKAIGGDDSKDNVATNELIQKTDAGKNDKVIMLQPDVWYLSGG GLESMHLMIEDVKKGLE >gi|237663592|gb|GG668926.1| GENE 187 192307 - 193950 1662 547 aa, chain + ## HITS:1 COG:lin0200 KEGG:ns NR:ns ## COG: lin0200 COG4166 # Protein_GI_number: 16799277 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Listeria innocua # 2 545 4 548 549 384 38.0 1e-106 MKLGKKVVGLIATGFLLAACGGTKEAAEKVDSGNLAAEQKISISSPAPISTLDTTQTTDK NTFTMAQHLFEGLYRFDDDSATVPALAKDVKISDDGRKYHFTLREGIKWSNGEPITAQDF VYSWKKLVTPATIGPNAYLLDSVKNSFEIRNGEKSVDELGISAPNDKEFIVELKQAQPSF LAVVSIAWLAPQNQKFVEAQGKDYALDSEHLLYSGPFTLANWDATSDTWTLKKNPEYYDA DQVKLEEVAVSTIKEDNTGINLYQANELDLVRINGQYVQQYQEDPGYVSHPDVANYFLDF NKKEGTPLANVHLRKAIGQAIDKEALTQSVLNDGSKPLNGLIPSKLYANPETDEDFRAYS GEYLKNDIKKAQAEWTKAQADVGKKVKLSLLAADTDQGKRIAEYVQSQLQENLPGLEITI SSQPSNNVNQSRREKNYELSLSGWIAGSSELDSYFNLYAGESSYNYGNYHNAKYDQLVED ARTINANNPEKQFAEYKEAEDILLNQDAAQVPLYQSASNYLINPKLKGISYHLYGDYFHL RNAYLTE >gi|237663592|gb|GG668926.1| GENE 188 193972 - 195192 1253 406 aa, chain + ## HITS:1 COG:FN0733 KEGG:ns NR:ns ## COG: FN0733 COG2195 # Protein_GI_number: 19704068 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 4 405 9 410 412 456 54.0 1e-128 MEKLVERFLTYVKVNTRSDANSQTTPTTVGQVVLARMIETELHELGLADVHYNEQNGFLT ARLPGNQPAAKSIGLIAHLDTADFSAENIRPQVITNYDGQDVLLNQEQGIVLSVAEFPNL KEYQGETLITTDGTTLLGADDKAGIVEILAAVEYFLAHPEVARGDVWLAFGPDEEIGRGA DQFDAPNFPVAFAYTIDSGRVGHFEYETFNAAQAVITIEGTSVHPGTAYGSLVNAIKLGE QLDQSLPQKEVPEQTRGNEGFYLLNKFTGSIEKAELVYIIRDHDRENFQARKQFLEKQVQ RLNALADKPRLTITFQDQYYNMKEIIEKDWTPVELAVQAMESCDIEPIITPFRGGTDGSK ISFMGIPTPNLFTGGENFHGQYEFITVESMAKAVQTIIAIIRLNAN >gi|237663592|gb|GG668926.1| GENE 189 195278 - 195835 271 185 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116511539|ref|YP_808755.1| SSU ribosomal protein S5P alanine acetyltransferase [Lactococcus lactis subsp. cremoris SK11] # 1 151 1 145 186 108 39 2e-22 MNYPLIFAENQQLETERLHLRPVTLADTDDLFEYASDEETTRFVFPKNETKEETRASIAK YFMGEPLGKYGIEVKETGKMIGTIDLRVNETNNIGELGYVLNRAFWGNGYMPEAATALIE LGFAKMKLMRIFALHDQDNPASGRVMEKIGFTYEGTLPNARISKGKIVTDVYRGMTLETW QNRQK >gi|237663592|gb|GG668926.1| GENE 190 195870 - 196481 742 203 aa, chain + ## HITS:1 COG:L195366 KEGG:ns NR:ns ## COG: L195366 COG4493 # Protein_GI_number: 15673736 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 3 198 1 194 199 161 46.0 6e-40 MLMFTEKEFAAFEVAGLDERMAVIRAQIQPIFQELDTYFAEQLAPELGTELFVHIAQHRR RTVYPPENTWSALSPNKRGYKMQPHFQLGIWGDYVFMWLSFIDNPKNEKQIAQAFLENQP LFQALPEDTYVSLDHTVPQITPLPDTDLEKALTRFRDVKKGEFEIGRIIPKDSALWQSPE KARAYMLATYQQLLPLYQLAVAQ >gi|237663592|gb|GG668926.1| GENE 191 197219 - 201103 3182 1294 aa, chain + ## HITS:1 COG:no KEGG:EF3075 NR:ns ## KEGG: EF3075 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 313 1294 444 1426 1426 800 50.0 0 MKQNKWQRLAAIGLCGSLLVNAFSGVTAVAETVMIESSPTAESSVKEETQASSETQTTSE ATTETSQEEVTQETEKQAEVAVEKKEDMPVKEEQEEAEAQPTVRSERAVGVKEAGKVSEL STWFESESKSFPAQDQSYTVPEYRFSINIASEDKTTLNMEDFQLTSEMGLDRWRQSMQTS PFTTNFQTIPVPNVPTTTGLDILIPSQTIDVNYLHYWADMSAYYLKDPILTVPQYIDTIE VANSGIYNRYWPFSIAGFPYDIKLVKTNNSYTLQQPQYQVWGNYYSAGFAAELRTTYQGK QTGLQYLAVQQDIDLTTTYKKVTENFVDATGAKITPPTGFTQGQQTSITSNDFTYTSAKA LPDMYTAGGKAYKFKGWYKGTDKTALKTTKTPSYAVTYDDQDDMTAVYEDLGEATTLPAQ TFKFSFVDEQGNLVNPSGISLKGKIQEYVTDETPKIIGEITGKDNGMVKEYTIPEKVFYG VTDTRFSFYGAKTSVFTIPKYYKSLAKSPGTYYSKTAKVYPVASIRRKNFITNVLDPEAS NDLTYQDLFALTDPTQFLLAEARYNVSPTNTRFTALGMAYRSSTSGFVVISNDDDPTYYY LENRRVTENFVDATGAKITPPTGFTQGKQTVIDSDNFTYTSAKALPASYTVGDKNYKFKG WYKGTDQTALKTTKTPSYAVTYDDKDDMTAIYEEVQETTVHPGFYAEFVDEQGKAFTNPL TLSGNYTEFLRKNATSPFEATGSLYPMAGSKEATVANRYKVETKQNVLIPNNYELLPDPA TGVLNRGFALNNFGITNELKYVDKVEATTKTITLYDYDTISDIGTNLLSDAATTSLNSFE TTLNKETNNTFSVKAKWGQSGLSRDILPNLLFLTSANSKPRLFGFDGTSDYKQTINYKIT RKQVTENFVDATGAKITPPTGFTQGKQIPMTSNSFTYTSANALPDTYTAGDKSYKFKGWY KGIDKTALETTKTPSYAVTYDDKDDMTAVYEEVQPTAEMTVSRLLEVIPNGSSMVWTVRL KNTSEVPLTNIKLAPTAKWAAGISAPTQLAVRIGSTSKIIPVTAEQWRTGVNLGVEIPVN GEALVTVNTAKITGEPRQLLTAEMTASGNFSAVTASNFVRIQGEDQTITPAPVEEGFIST PTFDFGKITISSSAKQYGLKKAADYYGNGTRNPYLRIKKSQPNWQLTAQLSQLKASTDSL PTSTRLLLGNADVAAIENYNQVTESTNKVGVTKALTLTSDGTSTPVILNNQFTGNDVYQL DFDFASVKLDVPANQGKINEKYQGTVTWNLVTGP >gi|237663592|gb|GG668926.1| GENE 192 201159 - 201695 656 178 aa, chain - ## HITS:1 COG:lin1308 KEGG:ns NR:ns ## COG: lin1308 COG0681 # Protein_GI_number: 16800376 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Listeria innocua # 21 167 28 182 188 136 48.0 2e-32 MSSLLKRLVQLVLLVGAVLLIRHYVFSPAAVNGSSMEPTLHNNDRLWVTSIKKPQRFDII AFPSPRNGQRVAKRLIGLPGETVEYRDDTLYINGVSLSEDYLASAKRNVSKNENYTQDFT LETLEATQSLTVPEGMYFVLGDNRPRSDDSRYFGFVKQESVEGVLTFRYYPLDKIGFP >gi|237663592|gb|GG668926.1| GENE 193 201757 - 202305 694 182 aa, chain - ## HITS:1 COG:lin0607 KEGG:ns NR:ns ## COG: lin0607 COG1268 # Protein_GI_number: 16799682 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 175 1 175 182 181 61.0 5e-46 MNKASLRSLILAAEFAVIIAVLSQFTIPLGIVPLTGQTFAIGLTATVLGKRTGTYAILIY FLLGLIGLPVYAGMSSGFGVLFGPTGGYLIGFIFNGLLTGYILEKTTFNYTWAIIANIAG ALVTLVFGMIWLKYSANLPWPNAFAGGFAPFIIPGIIKAVAAAYVGILIRQRFMKRFLAH LS >gi|237663592|gb|GG668926.1| GENE 194 202465 - 203076 1045 203 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|29377528|ref|NP_816682.1| 30S ribosomal protein S4 [Enterococcus faecalis V583] # 1 203 1 203 203 407 100 1e-112 MSRYTGPSWKVSRRLGISLSGTGKELARRPYKPGQHGPNSRGKVSEYGMQLTEKQKLRHM YGMNERQFRTLFIKASKIKEGKHGVNFMVLLEQRLDNVVYRLGLATTRRQARQLVNHGHI TVDGKRVDIPSYHVEVGQVIGVREKSQNISTIKEAVEATVGRPAFVSFDTEKLEGSFTRL PERDELYPEIDEALVVEYYNQKL >gi|237663592|gb|GG668926.1| GENE 195 203401 - 204204 717 267 aa, chain + ## HITS:1 COG:lin0602 KEGG:ns NR:ns ## COG: lin0602 COG2116 # Protein_GI_number: 16799677 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Listeria innocua # 5 258 6 259 266 273 67.0 2e-73 MKSGSPLFEQIDKSIDKKVNLFSNSFSRYAVRAMLACLFLTLGTAVAFAIAIKGEGISHG LGKMLYAFMFSWSLVMILYMNAELGTSNMLYMTVGVYRKKVNFSLAAKILFTCILFNLIG GVLFGFLVSLTVPFQDLPKDSFFFTSIAGKLEKTTLQILVEAMFANIVVNTAVLVSMRMK DDAGKVAAIIFIIFIFAFLGFEHVIANFPAFSLAYFASNGAIEAFTAGNVVHNLFWAFIG NFIGGGLIMGLGYAWLDKDNKNLTYFD >gi|237663592|gb|GG668926.1| GENE 196 204276 - 204929 610 217 aa, chain + ## HITS:1 COG:Cgl0917 KEGG:ns NR:ns ## COG: Cgl0917 COG4912 # Protein_GI_number: 19552167 # Func_class: L Replication, recombination and repair # Function: Predicted DNA alkylation repair enzyme # Organism: Corynebacterium glutamicum # 9 210 19 206 208 120 37.0 3e-27 MDTLQFQKNPETAAKMSAYMKHQFVFAGIPAPERQALSKQLLKESHTWPKEKLCQEIEAY YQKTEREYQYVAIDLALQNVRRFSLEEVVAFKAYVPQKAWWDSVDAWRKFFGSWVALHLT ELPTIFALFYGAENFWNRRVALNLQLMLKEKTNQDLLKKAIIYDRTTEEFFIQKAIGWSL RQYSKTNPQWVEELMNELVLSPLAQREGSKYLAKASE >gi|237663592|gb|GG668926.1| GENE 197 204939 - 205715 681 258 aa, chain + ## HITS:1 COG:lin1028 KEGG:ns NR:ns ## COG: lin1028 COG0561 # Protein_GI_number: 16800097 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 4 258 3 256 256 178 37.0 1e-44 MERKLFAFDIDGTLLNSEKKALDSTREALAKLREQGHLVTLATGRSRYMAQEVIWDLDFT NYVLCNGAAAFVDHEQYYQNLLHAEALERLAQDSDQRGLGFACVGLDDIKKSNQHRAEKM EIAMNSFHFHSPAYDEHFYRQNDIYQALAFYDAEDQCTFEEEYPEFRFIRWHQHSVDVVP KDGSKSATLTYLAKRVGIDAKNIIAFGDGENDREMLSHAGIGVAMGNASPSIQEVATMVT DTNDNDGIWKALKEMKAI >gi|237663592|gb|GG668926.1| GENE 198 205762 - 206325 789 187 aa, chain - ## HITS:1 COG:SP1456 KEGG:ns NR:ns ## COG: SP1456 COG0242 # Protein_GI_number: 15901306 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Streptococcus pneumoniae TIGR4 # 1 187 13 203 203 265 69.0 3e-71 MITMKDIIREGNPTLRAVAEEVPVPITEEDRQLGEDMLTFLKNSQDPVKAEELQLRGGVG LAAPQLDISKRIIAVHVPSNDPENETPSLSTVMYNPKILSHSVQDVCLGEGEGCLSVDRD VPGYVVRHNKITVSYFDMDGEKHKVRLKNYEAIVVQHEIDHINGIMFYDHINKENPFALK EGVLVIE >gi|237663592|gb|GG668926.1| GENE 199 206569 - 206874 511 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227517326|ref|ZP_03947375.1| ribosomal protein S15 [Enterococcus faecalis TX0104] # 1 101 1 101 101 201 99 3e-50 MIRRIIEKEVEQMAISQERKNEIIKEYARHEGDTGSPEVQIAVLTEDINQLNEHARTHKK DHHSYRGLMKKIGHRRNLLAYLRKTDIQRYRELIQRLGLRR >gi|237663592|gb|GG668926.1| GENE 200 207061 - 209175 1689 704 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 11 703 11 701 714 655 50 0.0 MTEKQVFKTTWGGRPLEVEIGQLAKQANGAVLVRYGDTVVLSAAVASKEAKDVDFFPLTV NYEEKMYAVGKIPGGFIKREGRPSERATLTARLIDRPIRPMFSEGFRNEVQITNIVMSVD QDCTPEMAAMFGSSLALAISDIPFDGPIAGVDVGRINGEYVLNPTVEQAEQTDIELTVAG TKEAINMVESGAKEVSEEDMLGALLFGFDAIKELVAFQEEIVAAVGKPKMDVDLLQVDAD LKKEIFDAYYNTMKTAVMTEEKLAREVEIDKVKDTVKEVYAEKFAEHEEEAQLLKEVKQI AEDLEKDVVRELITIDKIRPDGRKLDEIRHLSSEVSILPRVHGSGLFTRGQTQALSVCTL APLGEHQIIDGLGVQDSKRFIHHYNFPQFSVGSTGRAGSPGRREIGHGALGERALAQIIP SEEDFPYTIRLVAEVLESNGSSSQASICAGTLALMDAGVPIKAPVAGIAMGLVSDGENYT ILTDIQGLEDHLGDMDFKVAGTKDGITALQMDIKIQGITEQILTEALDQAKKARMEILEE LTTTIAAPREELSQYAPKIEMIQIKPAKIKDVIGKGGETINSIIDETGVKIDIDQDGNVS IASSDAEMIKKAIKIIEELTKEVEVGQVYLAKVVRIEKFGAFVNLIKGKDGLIHISQLAN ERVNNVEDVVKLGDEVLVKVTEIDKQGRVNVSRKALLNEENKEK >gi|237663592|gb|GG668926.1| GENE 201 209357 - 210217 1041 286 aa, chain + ## HITS:1 COG:L98749 KEGG:ns NR:ns ## COG: L98749 COG1792 # Protein_GI_number: 15674213 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Lactococcus lactis # 44 279 44 285 291 165 40.0 1e-40 MKKFNPNKNIIITLILVIILVTIISLTAAQRSEKGKTNVVQGGVNNSVSMVDRVISFPAR VVENGLSSMGNLINTFKENERLKEKIDSYNELAVQNNNYKREIDSLKQELNLNETLANYE KVTANVITRSPDTWQDLLIIDKGTNDGIEAGMAVMAQKGLVGRVIEVNATTAKVELLTSK NVNSNHFPVRVTSANGESFGLLKNYDNKTNALIVSQLTGDATLKEGDVVQTSGLGGNSPA DLAVGTVIKVKPDSFGLDREVYVKPYADVYGISVVTVVKRSAGESE >gi|237663592|gb|GG668926.1| GENE 202 210214 - 210723 503 169 aa, chain + ## HITS:1 COG:L98132 KEGG:ns NR:ns ## COG: L98132 COG2891 # Protein_GI_number: 15674212 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Lactococcus lactis # 7 169 6 168 175 81 34.0 6e-16 MIRKEYLKYVTPILLFFLMLIDAHLTKSFETWTSNVYFASSHLLLLAFMFAVPNFSKRYL LITSLILGFICDSYYIGIIGIYTVALTISVMLMYTFKEVIQTNLLTGFFGIVIFTTLYEL IAVLIQVAFHLADVSPILFITRVLGPTLLLNMVWYVILSYPLKKLFSVK >gi|237663592|gb|GG668926.1| GENE 203 211028 - 212473 1867 481 aa, chain + ## HITS:1 COG:SP2216_1 KEGG:ns NR:ns ## COG: SP2216_1 COG3883 # Protein_GI_number: 15902020 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 274 1 270 270 93 31.0 7e-19 MKKSVLSALMVCSITLTSVALPSAAFADEYDTKIQQQDQKINALTSQMSDAEAKVAAIEN DMVETAKQIDTLTAKKNKLSSEVSKLYSEISDLNVRIQKREVQMTKQARDVQVNGQSDSI IDAVLDADSVADAIGRVQAVSTMMSANNELLEQQKEDKATVEKKTKNVEKQIAELEAATK ELNDKTESLKTLKIQQEVAKNDLEAQRSEEQGKKDGFIKQKKEAEKRLAEEQARQRAAAK KAEEQAAAQAQAAAQKAAAEQAKATKAANEAAASAAEEKAATPVVESSTTTESTTTQETT TSSTETESVVTTPAAAPEKEKEVPVTNPTTPEKGNEAKPGNGGVTSGKQAAINAALADVG NSYATGWNQPGECLVSVRRWLAAGGINFGYGGPNSGYVASGATQVSWSNVQPGDVVQYES AYSPDSWIGGVHTVLVTGVSGGSVQIVEANNPGGSGYVSSNSNWSPAPPAGFRAVVWRFP G >gi|237663592|gb|GG668926.1| GENE 204 212651 - 213220 565 189 aa, chain + ## HITS:1 COG:lin0482 KEGG:ns NR:ns ## COG: lin0482 COG1309 # Protein_GI_number: 16799557 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 7 185 7 185 186 196 54.0 2e-50 MSGTHDTKQAIASALIELCEQKDFRKISVQDITKKVGLNRQTFYYHFTDKYDLLRWIYRH DALIYLETDICLENWEEQALKLLKAIKEKSHFYYTTVTSDSEVLLNVFSASTNRLFISLF EQVDVENHLTDKDKQFYANFFSYGCSGVLTKWILEEYSQTPLEMATQLFRLAKDTEFMAY HLYEQEANE >gi|237663592|gb|GG668926.1| GENE 205 213261 - 213731 641 156 aa, chain + ## HITS:1 COG:lin0937 KEGG:ns NR:ns ## COG: lin0937 COG0394 # Protein_GI_number: 16800007 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Listeria innocua # 1 150 1 149 152 170 52.0 1e-42 MVTVLFVCLGNICRSPMAEAIFRQKVQQAGLESAIQVFSAATSHWEVGSQPHKGTRKILE QQGISYQGMQATQIQPSDFKKYDYIIGMDANNVADLKALAPQEEQRRIHLFMEVVAGKET MDVPDPYYTGDFEETYRLVEAGTSEWLKKIKAQLKD >gi|237663592|gb|GG668926.1| GENE 206 213820 - 214050 386 76 aa, chain + ## HITS:1 COG:no KEGG:EF3057 NR:ns ## KEGG: EF3057 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 76 16 91 91 108 97.0 5e-23 MNSSYLSYVFELSLYYLLLIMSLPLVYAVTYHLSFSSMYTSEWLMISVFLSPLVLLFAGI RYGFARLKQQERQAMK >gi|237663592|gb|GG668926.1| GENE 207 214098 - 214832 732 244 aa, chain - ## HITS:1 COG:L125196 KEGG:ns NR:ns ## COG: L125196 COG3764 # Protein_GI_number: 15673095 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Lactococcus lactis # 4 242 44 287 287 216 45.0 2e-56 MRPKEKKRGKNWLINSLLVLLFIIGLALIFNNQIRSWVVQQNSRSYAVSKLKPADVKKNM ARETTFDFDSVESLSTEAVMKAQFENKNLPVIGAIAIPSVEINLPIFKGLSNVALLTGAG TMKEDQVMGKNNYALASHRTEDGVSLFSPLERTKKDELIYITDLSTVYTYKITSVEKIEP TRVELIDDVPGQNMITLITCGDLQATTRIAVQGTLAATTPIKDANDDMLKAFQLEQKTLA DWVA >gi|237663592|gb|GG668926.1| GENE 208 215066 - 215851 740 261 aa, chain + ## HITS:1 COG:no KEGG:EF3055 NR:ns ## KEGG: EF3055 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 261 1 261 261 499 100.0 1e-140 MLDLIYVHIDVTSNAVLSKGITHSDFVRSIVHHPQNLLLLDPSAEAGEYDMHSGLKIIRG EESVNRYFQSLQRRWMTEEIKWIDFSDVTMLKELTPLEISELLYFGHMKNSLHSPFFYKL QNDFVFFEFADQMTRVYYRYIDEFYRIFADKITRVVLEKVNQKKAFFKRNTPVEKLSPEL LKNMKGILQEGVIFCFQQTEVDKEEYRIPIYLVEDSLSKMKNTSYQKEEILATLVYNSEK RIWHIEQENDFGEIFMLAHEG >gi|237663592|gb|GG668926.1| GENE 209 215955 - 216581 707 208 aa, chain + ## HITS:1 COG:lin0040 KEGG:ns NR:ns ## COG: lin0040 COG3212 # Protein_GI_number: 16799119 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 64 208 60 203 203 89 36.0 5e-18 MKKILYGALTGLALFLVAGCTPKTPTAVSPTNEQKETAISTSETSSSVQQEATTTSEKTS AVAVSLEKVTTAFEKKYPEAKITSLQLDTDFGRYFYEIEGVDQQKEYQVEVNAETGEFTK EKVETLDADEQNGVKMQEEALDLTKIISREQATTLAEKAAKVGQATDWKLEKELGITYWE VKVKEGQQKIEVKIDAHSGKILTTERDD >gi|237663592|gb|GG668926.1| GENE 210 216745 - 217320 542 191 aa, chain + ## HITS:1 COG:SPy0600 KEGG:ns NR:ns ## COG: SPy0600 COG3859 # Protein_GI_number: 15674683 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 190 1 186 187 116 38.0 2e-26 MARKMDLRIWVEGTVVAAMAMALSFLPIEFANSGLDLSLGMVPLVLYSFRRGLLPGVAAG FVWGMLNIILGTAMKNFLSVPQIIFEYPFAFAFGGMGGVFARKIQLYFQANRLKSAIRTI ILGSVVAVFARWFWHFWAGVLVWGMYAPEGMSPYLYSFVLNGTSTVVNCLYVSLVLGLLA KVAPQLFVPKK >gi|237663592|gb|GG668926.1| GENE 211 217438 - 218550 826 370 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517339|ref|ZP_03947388.1| ## NR: gi|227517339|ref|ZP_03947388.1| hypothetical protein HMPREF0348_0322 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0322 [Enterococcus faecalis TX0104] # 1 370 9 378 378 630 99.0 1e-179 MVSLSELLEVSFYPKALPHVAKRVTIFGPLSEQELVEQWQQKQSFARQDERTIMPEKLLQ QSASKSYLSIRCLGLTLDPKILLEKLQHLFPLFIWTKGQAETSDTENCYFCEFIPICSNA AQPCNLEASLQQMNYPTTQSLVEIVNEWLNNERQIEQASVTGTYYQQASLPQQVGSQSEI KTKEEQQIRFLQESLRQEKAAKARMKVAKEKAEQELLRLEKGLFASSWAHFEEQQTKELE EEEWYDLVKIDLFYYDELSKKAKFLKEAWEINQQLLKAFPQKEGTTFLPELAHHGRVASL TDQVSELEIKTLYEQGVLIKERMKFTQGSWLTKPRVKLYQIDLEQLERIGTLFDLLQTEN RLIEVALAHP >gi|237663592|gb|GG668926.1| GENE 212 218623 - 218985 336 120 aa, chain - ## HITS:1 COG:no KEGG:EF3052 NR:ns ## KEGG: EF3052 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 120 1 120 120 180 100.0 2e-44 MDQHKATIKSISKLITLSSQHFFSAFLEDSQDQKNKEKERSALLQELQVAAAQKSLVVLQ LKEVPTAHKFETVIGWIVSKNISDNIVVRLQTDEQQLRMIPVASVMKVSTLANRHQRQIH >gi|237663592|gb|GG668926.1| GENE 213 219211 - 219978 731 255 aa, chain + ## HITS:1 COG:no KEGG:EF3051 NR:ns ## KEGG: EF3051 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 255 1 255 255 509 99.0 1e-143 MSKKPSGYQKKVLTVLLVSFGFGGLLAQFSPMKSGGFSSWFDDSYVKASAESSKTKEPAP VKIEKKVKPLSYGQQVNQEIEKKQYDGHLDLPLELQTDAKWKDTAYGFGNVDKPNTIEIN GCAIVSLAMVGSYMDHQEVTPLDVLAWAKNDFFMEGQGTAWSIFSAYAEMKGYNCQEIGN IETVAAFLKEGHPVIISVKPGYFTTTGHIMVMSGVDEKGDFWINDPNDSEEKGHSKRTFT AEEVMNEALNFWAFY >gi|237663592|gb|GG668926.1| GENE 214 220055 - 220606 443 183 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 1 180 1 179 185 175 46 2e-42 MERCTWATNTTEEMQAYHDDEWGRPVHEEQQLFELLTLESMQAGLSWAIILNKRETLRAA YDAFDYRKIARYDEKKILALLANPGVIRHRLKIQATITNAQVFQEIQAEFGSFDRYLWNF VDQQPIVNHWQHPEEVPASTELSQQISRALKKRGFKFLGATTVYSFLQAAGLVNDHLETC QYK >gi|237663592|gb|GG668926.1| GENE 215 220644 - 222299 1666 551 aa, chain - ## HITS:1 COG:lin2300 KEGG:ns NR:ns ## COG: lin2300 COG4166 # Protein_GI_number: 16801364 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Listeria innocua # 20 549 22 556 559 410 42.0 1e-114 MKKSVLFTSLLVLSSLALAACGGGSDDKGASNGGSDNQVYTMVESQEMPSADPSLATDEV SFTTLNNVYEGIYRLDKDNKPAPAGAAEKATVSEDGLVYKVKLREESKWSDGKPVTAADY VYGWQRTVDPATASEYAYMFEPVKNAEKISKGELPKEELGIKAINDHELEITLETATPYF DDLLAFPSFLPQRQDIVERFGKDYTKSSDKAVYNGPFTLTEFDGPGTDTKWSLTKNEEYW DKETVKLDKVAINVVKEAPTALNLYETGEVDDTYLSGELAQQMQNSPDLVQLKAASSFYL EMNQADEKSPLTNANLRRAMSYAIDRDSLAKNILANGSLPSQGFVPVDVAKSPKTGEDFV KEAGSDKLVKYDKKKAVEYWNKAKQELGVSNLTVDLMVDDSEGAKKMGEYLQGSLSDTLE GLKVTVTPVPMAVRLDRTLKGDFQIAVRGWSADYSDPINFLDLLESSTSNNRGRYSNPEY DKFIAASKTTDVNDPEKRWEDLINAEKTVIADMGVVPIYQKAESHLRAPNVKEIIYHPTG AKYDFKWAYKE >gi|237663592|gb|GG668926.1| GENE 216 222502 - 222612 62 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLQKHLFAFVTIFFSSHLFFVKGMFILCQKNQINDE >gi|237663592|gb|GG668926.1| GENE 217 222618 - 222959 427 113 aa, chain - ## HITS:1 COG:lin1653 KEGG:ns NR:ns ## COG: lin1653 COG5584 # Protein_GI_number: 16800721 # Func_class: S Function unknown # Function: Predicted small secreted protein # Organism: Listeria innocua # 30 108 19 100 103 85 54.0 2e-17 MNEENELTYFKGGLALGVGLGLVGGIASTLFYHKKKTISADLVLENVKAAFLKEGPIEGS WIEFEKKPLRKFAIHSKTYTGGICRIEDDGIVQYEFTADAYTGTVIDIQRLKD >gi|237663592|gb|GG668926.1| GENE 218 223266 - 224342 1182 358 aa, chain + ## HITS:1 COG:SPy0115 KEGG:ns NR:ns ## COG: SPy0115 COG1363 # Protein_GI_number: 15674335 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Streptococcus pyogenes M1 GAS # 6 354 5 352 355 417 56.0 1e-116 MEEKTFQRIKELTELQGTSGFEDDIRAYMKEHITPLVDDVQYDGLGGIFGIKRSKVEAAP RVMVAAHMDEVGFMLTQINDNGLFQVVPLGGWNPYVVSAQRFTLKTSKGNYPCISSSIPP HLLRGTSGQKQLEVSDVLFDAGFSSKEEAESFGVRPGDSIVPQTETIKTANGKNIISKSW DNRYGCTLVLDALETLQNEELGHTLIAGANVQEEVGLRGSKPSVHKFNPDIFFAVDCSAA DDIHTKKGTYGHLGEGTLLRIFDPGLITLPRLREYLLDTAATHNIPYQYFVSKGGTDAGA AHTTNNGVPSTVIGVCGRYIHTHQTMFSIADYEAAREMLLQALRGLDKSTVNTIVYGK >gi|237663592|gb|GG668926.1| GENE 219 224354 - 224668 469 104 aa, chain + ## HITS:1 COG:SP1911 KEGG:ns NR:ns ## COG: SP1911 COG0526 # Protein_GI_number: 15901736 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Streptococcus pneumoniae TIGR4 # 1 103 1 104 105 134 59.0 3e-32 MIYPNSLEELATYVEKGKNVFFFTADWCGDCRFIKPVMPEIEEAFPAFQFIEVDRDQFID VAAEWNIFGIPSFVVIENGQELGRLVNKDRKTKEEISAFLTSLG >gi|237663592|gb|GG668926.1| GENE 220 224816 - 225271 672 151 aa, chain + ## HITS:1 COG:SA1532 KEGG:ns NR:ns ## COG: SA1532 COG0589 # Protein_GI_number: 15927287 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Staphylococcus aureus N315 # 6 150 4 146 166 126 44.0 1e-29 MEEQMYKNILVGVDGSDQANLAYERAIEVARRNGSRVIVANILENQVYTMMGYSTLNDQL IDQETAAAEELMTDCKKYAESVDFHNVETVTMFGSPKEVMSHELPEKYNVDLIMVGQSGL NAVERVVMGSVSSYIIRQAPCDVLIVHSEEK >gi|237663592|gb|GG668926.1| GENE 221 225482 - 226102 838 206 aa, chain + ## HITS:1 COG:SP1910 KEGG:ns NR:ns ## COG: SP1910 COG0073 # Protein_GI_number: 15901735 # Func_class: R General function prediction only # Function: EMAP domain # Organism: Streptococcus pneumoniae TIGR4 # 1 202 1 200 208 205 54.0 4e-53 MIFAYNKEHVGDVLLVIVADDQGAENQVKRVGDVARVSLVEAPETVVAWNIFNASALLGD INGTGQVTLTDEQIEKVNTAIKDAGFSETLEKDDTPKIVVGFVKSCKKHPDSDHLSITQT EVDNGEILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWPGVLRGEESFGMICSAKELRL PNAPAKKGILELPFDAEVGSAFAVGE >gi|237663592|gb|GG668926.1| GENE 222 226424 - 226750 327 108 aa, chain + ## HITS:1 COG:no KEGG:SPJ_0722 NR:ns ## KEGG: SPJ_0722 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_JJA # Pathway: not_defined # 7 108 11 112 112 61 40.0 9e-09 MKKVLFVGLVCVGFFSSVVFGGKSVEAAVAYPHPHYKDTWEYGVTKSNYAYSYYYLEAPV RLGSYASVTDAYGNVKSRARSNYGWARAGAQKQWYWLVANSYYDWYNF >gi|237663592|gb|GG668926.1| GENE 223 226838 - 228853 1374 671 aa, chain + ## HITS:1 COG:no KEGG:SZO_04440 NR:ns ## KEGG: SZO_04440 # Name: not_defined # Def: membrane protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 671 1 667 667 384 34.0 1e-105 MKWRISVLLIITGLLAVLSFSEIKEFGNDLKYPAESAVNITSYSQERDKTSVITELEKFA KEQDLVLFKPIYTNNHQSTFVFGHAPRWLSNSDGNYTQDKQLLSDTELTGMYYSSKPLNK TMQSKLTGKGFKYKAGDIGWWLAPLDFLFGNLRSYSVWTVFFIFALLLFAIKMFYLKKAM IQRSLGLLRKQMIKEMSSDILVLILSTLSIILIFCSYLGNITSVFVKTFILLNVVNMLLL IVISLISNSLFFLNVALFKPIQILKNKENKTFVQVVWLIGILLALFIFGLTINESLKVNR TLCNQIKTLDHWQAAADFVKIDWFEKNTEQKNVKGEVKWEDIIEESEENKQFVQFFSSDE WLYSKSSDLGTAEEMNIPELTNQLKETGIDTKIAQQIHYVNPAVVQKNRKEYPENQWPKE ASKRITVYVPEKYQEQIEDIKKIIYYEWFQYTTIDIEDSDFNSIPNEQKTFLFNYHENND VLAHQEAEGKIIVELDFSLFPSEDEVLNSLYPQVVFDGLFKQEKVLLALKSSGLNQSFSG MTNAAKAIFIKKETLMSQLRGTLIAISVLLIAQFFVIYQYVVTQVRSRGKQIVIRNLLGG NTIFEIFKCLFYLVVGIICISSSLLFYTKNWFIFASLNFLCLTEVSLMISWAFYLIKKKR VQIIKGDFEIL >gi|237663592|gb|GG668926.1| GENE 224 228850 - 229455 238 201 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 196 1 210 245 96 30 1e-18 MIKIEHLEKRYGGKQIYTDLNIQLEKNHSYALVGPSGSGKTTLLNAIGRLEKPTEGKIYF EGKDIWKMKESKYFGQYLGYVFQNYALMDEATVYENLKIIDNRLSIIEALKKVGLDESYL KMKIYELSGGQAQRVAIARVLLKKAQIILADEPTGALDEVTGQSIIQLLLELVSPNTIVI FATHDPRVFEKVDHVIDVSKL >gi|237663592|gb|GG668926.1| GENE 225 229489 - 229554 56 21 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLLANNLSELMKCYGKRVTI >gi|237663592|gb|GG668926.1| GENE 226 229762 - 231051 1503 429 aa, chain - ## HITS:1 COG:SPy2216 KEGG:ns NR:ns ## COG: SPy2216 COG0265 # Protein_GI_number: 15675945 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Streptococcus pyogenes M1 GAS # 53 425 35 405 407 324 55.0 2e-88 MQRKDVTPNSDKKSLLQKFGIGLAGGLLGGALILGGAYSGIIPTPNGGNNAATTTSTNHG DTKVSNVSYNVSSDVTKAVKKVQNSVVSVINMQSASNNSSADDPFGGLFGGNEGTQDSSG NNGNDLEAASEGSGVIYKKDGKTAYVVTNNHVVDKAQGLEVVLSDGTKVKGELVGTDAYT DLAVIKISSDKVDQVAEFGNSSKITVGEPAIAIGSPLGSDYANSVTQGIISSVNRNITNK NESGETININAIQTDAAINPGNSGGPLINIEGQVIGINSVKIVQSTSQVSVEGMGFAIPS NDVVNIINQLEKDGKVTRPALGITMSDLTGISSQKQEQILKIPASVKTGVVVRGVEAATP AEKAGLEKYDVITKVDGQDVSSTTDLQSALYKKKVGDKMEVTYYRGSKEMKATIDLTIDK SALTQQNNR >gi|237663592|gb|GG668926.1| GENE 227 231181 - 231306 68 41 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|307292049|ref|ZP_07571917.1| ## NR: gi|307292049|ref|ZP_07571917.1| hypothetical protein HMPREF9509_02345 [Enterococcus faecalis TX0411] hypothetical protein HMPREF9512_03079 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9509_02345 [Enterococcus faecalis TX0411] hypothetical protein HMPREF9512_03079 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9496_02865 [Enterococcus faecalis TX4000] hypothetical protein HMPREF9507_03081 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9511_01251 [Enterococcus faecalis TX0630] # 1 41 1 41 41 65 97.0 9e-10 MKKLYTEKCEQIGNNSVYSFQESYPQNVDNVDKSVANMCLY >gi|237663592|gb|GG668926.1| GENE 228 231452 - 231931 522 159 aa, chain + ## HITS:1 COG:lin0321 KEGG:ns NR:ns ## COG: lin0321 COG1576 # Protein_GI_number: 16799398 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 159 1 159 159 217 71.0 7e-57 MKIKLVTVGKLKEKYLIQGINEYLKRLNSYAKMEIIEVPDEKAPEKLSDAEMLQVKEKEG QRILGKINDNEYVFVLAIKGKQLSSEEFSKEIEQLGISGKSNLTFVIGGSLGLSDSVLQR SNQQISFGRLTYPHQLMRLVLVEQIYRGFRIMKGEPYHK >gi|237663592|gb|GG668926.1| GENE 229 231979 - 232821 726 280 aa, chain + ## HITS:1 COG:NMA1769 KEGG:ns NR:ns ## COG: NMA1769 COG3680 # Protein_GI_number: 15794662 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 2 278 5 271 299 194 40.0 2e-49 MLDKFSAPTLNKLQKDNQHIYYVYCLVDPRNNQPFYIGKGKDNRVFAHRQAALNLLRQSN LLKNDETAGTLKIKTIQEINALGMQVLSYILSYGLSEAEAFASENALINYARLIQRLPLT NLVKGHGSKAMLVEDIEECFGFQPMSISEIATDELILAVKVRDAFRLSKDETKEYPLDDT LRDVNNLKSRTLGNWVIGRDKIHRIRYIIAVNTGADNAVVAAYKVSSKYSESKIFENGLT RYAFQALSSRKDTLKELNLYKKCLPGIKFGSGSAVAYINN >gi|237663592|gb|GG668926.1| GENE 230 232919 - 234307 1621 462 aa, chain - ## HITS:1 COG:BH3820 KEGG:ns NR:ns ## COG: BH3820 COG1301 # Protein_GI_number: 15616382 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Bacillus halodurans # 11 441 1 399 413 175 32.0 2e-43 MEKKKREVKGISFTKKMVISLVGGLIVGLGFLFLREHLIRSNQGAVWQTINQILFQDISD PEKGQSAIGLFYIIGQLFINGLQLVIVPMVFTSITLAICHITDTQKLGRISYKTIFGFLS MSLIALLTAGIVGYSVYLTGAFNVSLSETLAPVEVSTSGNPLMVIVNAVTKNIGSAFSDN GAILAVVVLAVITGLCINVLGDKIRVFKKLIEEVNAMVTLFLTFVITKFAPIAVFMLLVR TFASYGIDYLKPALVYVVTTTATLLAFLMIGYPLFILFATKLNPVPFIKKIMKVVVFGFS TSSSAATLPLNTKTTVEELGVDSDVAAFVLPLGMTINMNGTAIMQVIAAIFVAGVAGYEV TPANIALIAILALMSSIGTPAAPGAGGIILFTILTGLNYNNEIAIATYSLILAINRPIEM LVTSLNVVGDSATAIYVAHSEDLLDEATYLTDVADLQNAEAE >gi|237663592|gb|GG668926.1| GENE 231 234655 - 235164 588 169 aa, chain + ## HITS:1 COG:no KEGG:EF3021 NR:ns ## KEGG: EF3021 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 169 1 169 169 291 98.0 6e-78 MKVTQLSSETLDRAHERFEETLAQMTVAEANTMPAPLIKSVTWLMWHTARELDLQISALN HSEPLWLSQHWTEKFALDLPDETEDWHHTPEEAAKVVVTEKQLLSDYLAASVALTKSYLD QIKEEQLSDVIDKNWTPPVTRQVRLVSAIDDAVMHSGQAVYTRRLVIGK >gi|237663592|gb|GG668926.1| GENE 232 235303 - 235767 506 154 aa, chain + ## HITS:1 COG:L0142 KEGG:ns NR:ns ## COG: L0142 COG1595 # Protein_GI_number: 15674148 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Lactococcus lactis # 17 154 17 156 164 61 32.0 7e-10 MKKEANFDEVLFSLGQEVIQVLIRRGASLEDAQDAVSQTYTTIFSILPEITSENLRPWFF RVTFNYYITMYRKKKRERTFVANSHPVQSIEKMEGQELLLLIDSLKDEEQELLLLKYYYQ LSYAEIALILELSVENVRKKLYRTRQKLKKELEE >gi|237663592|gb|GG668926.1| GENE 233 235770 - 236696 829 308 aa, chain + ## HITS:1 COG:no KEGG:EF3019 NR:ns ## KEGG: EF3019 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 308 1 308 308 577 97.0 1e-163 MDLKKSIRKAKRKQFIVIGAITVVSFAVLFVGFFVGMDKLSTKNYQALLEVINDQEMIAS PNTQLDSQVIANSSPFGGEVVTNRSKNIDGYTVEWSNLRSRYSFFRNSIDWNEVYPGSYY SSKNFYEYNRQTKQKVASFYNPAITNYYGDVKNELSELDKMENQVAEVAISFDKPYPYEE VRKMLPSNVNLVWLYVYSKTVNEKEGPSGTLPYGFQLSMDDHNEIFDPENDKQHFFETLE KSPLFADNQEGQKFIQQNKNKKVEKLPIWGVMLTGQTKNFKALQNEPFVRGASIGVTAPI VPYIQPEK >gi|237663592|gb|GG668926.1| GENE 234 236848 - 238629 1994 593 aa, chain + ## HITS:1 COG:no KEGG:EF3018 NR:ns ## KEGG: EF3018 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 593 1 593 593 1100 99.0 0 MFFNFIGLTLFFGIGILVANGAKIVANKGKKSKGTILLMVMELLLLGIFLFVTLPSKNLS TVLWINLIGAVIASGVLLSTRLASKVEVPGIQKGCKEVGKNTNKTANKDWSGKILGVAVL AMILLTIVSSITRISSIDEIYQTIPLKTEEKAEVLTSAKETPIAIAPQTAKRKMLQKFSV IPNSNMFTLDGITAQVVNGEYVYVATVEFNGFFKWLKLGEVPGYFIISATDINAQPEFVE KPIVYTPSAYFGKDAARKIYSAYPGYAATGTINLELDDQGNPYYIQTLYKEYGVSGRMHY NEFKTAVLNATTGEVNVYDSQKAPSFVDAPITSSAANSLNEFFGRYSQGWWNQTMFGAKK DVKIPTENGIYASGQITPMMNKEGNQLLYFTDFTSSEKDQDSALGYSLINARTGQVTYYR DTKVGIMDSDGAISIASKIYPEKKWKASMPVLYNIDGVPTWIVSLMDSKGIFKKYVYINA VDNDIVIDADTAQGALDAYRIELVTKGSNNENTDKANLKTMQGKVARISVVAGEAQTVVS FLLEDEKTIFSVTTNNSPLALFLKEGDQVTFKAVVTENAKAANVEELKIAGLN >gi|237663592|gb|GG668926.1| GENE 235 238741 - 239481 731 246 aa, chain + ## HITS:1 COG:BH0167 KEGG:ns NR:ns ## COG: BH0167 COG0101 # Protein_GI_number: 15612730 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Bacillus halodurans # 1 238 1 238 263 204 44.0 9e-53 MRNIKLTIEYDGKRYSGWQRLGNSEKTIQGKIESILTQMTGEPIEIIGSGRTDAGTHARG QVANFKTTSSLTTTEMLSFLNRYLPGDIVVKEVTEMPERFHARYNATGKQYSYYVWNSPI PNAFERYHSFHFPKALDQEKMEQACQKLIGTHDFIGFSALKKTKKSTTRTIEKITIERDG EMLQFTFVGNGFLHKMVRILVGTLLEIGAGTKELAIIDELFATKVREGAGETAPAQGLFL DEVYYK >gi|237663592|gb|GG668926.1| GENE 236 239505 - 240464 788 319 aa, chain + ## HITS:1 COG:DR0508 KEGG:ns NR:ns ## COG: DR0508 COG1715 # Protein_GI_number: 15805535 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Deinococcus radiodurans # 8 316 16 336 336 213 36.0 4e-55 MNKDWKKLKASNEGIPTFESLMPYTLEVLKDGDVLNRKIILKRIIQFLDIPDEIASMMYP NYPQGDGILANRFSFAISDLYKAGAVERIKRGMYQITELGLDLLNNYGEKINRKLLEQQP AYQKYMQELVERNNRVGTTTIEASAPIESAKIDIEDMINNQNNQIAIELLNKVRQVEPVF FEKLVIHLLETMGYSGKHGTAVVTSKSNDGGIDGIINQDPLGTSTVYVQAKRYHETNTIG RPAIQGFYGALAAVNADRGVFITTSSFSANAHEFAKNQGIVLIDGIKLTELMLEFGVGVE IAKTYKLFRIDNDYFEDEL >gi|237663592|gb|GG668926.1| GENE 237 240581 - 240964 286 127 aa, chain + ## HITS:1 COG:MA2218 KEGG:ns NR:ns ## COG: MA2218 COG1226 # Protein_GI_number: 20091059 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Methanosarcina acetivorans str.C2A # 2 118 1 117 136 84 37.0 5e-17 MLSLLISVKKLFSSFLGILKKEDTRALFFLLATTLLSGTIFYSTVEKLSPLDSLYLSFMT LTTIGYGDVHPVTDLGKIFTMVYATVGLGIMAMFISVVAKSYLYSKQSHHHHHHKNKEHS AEKSSEK >gi|237663592|gb|GG668926.1| GENE 238 241093 - 242355 1396 420 aa, chain + ## HITS:1 COG:VCA0036 KEGG:ns NR:ns ## COG: VCA0036 COG3633 # Protein_GI_number: 15600807 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Vibrio cholerae # 9 397 14 403 405 367 55.0 1e-101 MVKAIRKLSLIQKIMIGIVIGTTLGFLVPEWTFISVLGELFVGALKAIAPILVFVLIIAS LAQQKAGAKTYVGSILVVYLLATFLAAVVAVTASYLFPVKIVLEAAQESQAAPTQLSDVL SNVLTSVVQNPIQAMIEGNYLSVLFWSSLIGIGLRQSSVATKDVIANLSTGITTVVQMII GIAPIGILGLVFHSVATTGIAGLAKYGQLLLLLIGTMAVVALVVYPAIVFWNIRQNPYPL VFFVLKESAIPAFFTRSSAANIPINMELAKAMDLNEESYAVSIPLGATINMGGAAITITI MTLAAVHTLGMSVPIYLALLLSIIAAVSACGASGIAGGSLLLIPLACSLFGISNDIAMQV VGVGFIVGVVQDSIETALNSSSDLLFTTSVELADRRKNGEIIDVKALIGKSQLVVEQENI >gi|237663592|gb|GG668926.1| GENE 239 242505 - 245057 2393 850 aa, chain + ## HITS:1 COG:YPO0451 KEGG:ns NR:ns ## COG: YPO0451 COG0474 # Protein_GI_number: 16120780 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Yersinia pestis # 3 837 19 901 908 693 43.0 0 MKWYQLSSTKVIEQTKTKQTGLSSEERQQRLQTNGPNKIEEKQQLKTWQKLAKHFTDLLM VVLLAAAILKFATGEVVEGSIIFLVVLVNGFVGYWQERKAEESLDGLKQMMGQEAVVLID GQKTTVSSETLVLGDVVTLQAGDVVPADLRLFDVHNLMIEESILTGESEAVEKITGSLNE ELPTGDQKNLAFSGTLVQAGSALGVVVETGDATEVGKINHALQSVDQKTTPLVRKMHQLN KQIFQGIMVLIVFLIFFTTFRHGMEWSLLFSAMIALIVAMIPEGLPAVLTMILSMGVHEM ARENAIIKGMPSVETLGSMTVICSDKTGTLTKNEMTVMDVVTEEMTIVKEIMANCQELKL QDQQKIADLQGNPTELALLQYVDQDQLSLRPVEKKIPFSSSYKYMATRHPQAEGSIIYVK GAPEVLLQLSTLSDNQKGAWQAQAAQLAQKGQRVLGFAYKTVTSQQELTHETLSGLTFAG LAGIIDPPKESAIQAVKESQEAGISVKMITGDHKDTAQAIGEQVGLKHTKKVLEGLEIDT MSDEELAQHVQKVDVFARTTPEHKLRIVTALQNNGEIVGMTGDGVNDAPALKKADVGIAM GIKGSEVTKQAADMVLADDNFHTIAKAVKEGRRIFDNLKKTITFFLPTSLAQGLIVVWAL LMNHPLPLTPVQILWVNMVTTITLSYALGFEKASADTMKRPPRDVNEGILTKYSIFRIIY VSVLIMVPGYLMALQFEGQALQQTFLLQSIVLAQAAYMINCRKLVDPSLSTGFFQNKVLF ASLGILFLLQALVVYWPVAQQLIGTTSLNGLQLAMIFVHVVSLFFLVEGEKYITKRFMTK ESQKTSECPR >gi|237663592|gb|GG668926.1| GENE 240 245063 - 246511 1117 482 aa, chain - ## HITS:1 COG:no KEGG:EF3013 NR:ns ## KEGG: EF3013 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 482 1 482 482 822 99.0 0 MYSMLKRVITEKDLLRQIRLLEQLLNVPQLTAKRLATQIQTTERTVFSDLQYIRSQLPAD WSIETDSSGIRLRNQGNAQTNELWSLFLPQSISIQLLKELLFTKELVTTSFLSTSGVSYE TLKRHIKKMNQALRDFHLTIQLTTTTIQLIGAESNIRIFYHRLLVPFTHNNYFFDDYSIH EEHYFQFLKQVYSSELTVETEEIFGACWFFINTIRNKANCRVSQFSFDSKDVLFQLYQPS LAKLYASEGIYLQGEESFFAFFCFLESWNYDNVYGETLASALHTHYSQLRKSLQQFVTNL STEEARPDLIQTNLLDNLLLLFIKYTESPTLSEQFQLEYQELMTEQAAEDLALSKSNQEL LEILSRYTTIEEPTYFISLASLLEKQAIYSIQAQTMTAYFLFQGEPAWKAFLQQELAAYL GTRVKLQDIEYVELSQLTLNEADIIISNFPLDHLDLPVFYLSLIPTKNELRRLAELTLHS YF >gi|237663592|gb|GG668926.1| GENE 241 246603 - 247784 788 393 aa, chain - ## HITS:1 COG:no KEGG:EF3012 NR:ns ## KEGG: EF3012 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 393 1 393 393 702 98.0 0 MKNKSINYEAVLALVVKIFLGMFLYWIMNGFRHVSNFFPYNDVVTKVNQQGFYKFIYFVM NFTEGEFYGGLFTTLFLLIGGLIAWQLYRKNSKWQGFAIAGGSGAWPWVLASQLLSLFLT IYVFDFTRFFTKEVLWLPTFIVVVGTPPALTLVYGPGWKKLGTISLLSALFTFPFANWLN AQLMPLLNVPGTVSNVTTMAFVGWIVSAICHQLPWMVPSVAPIAQKRQKQPKIENTQTFQ WSIRRTFADFSEAWFYGNELVGGLVILGVLTDWFVNINHITNGSGLVPDILMGQMIASAV GVFLYRKHFAEEGWYPTFMPLVSIVPGVILMMGGGFWLSLTIAVLAGISAAPVGNYIAKR LPPFVPDAVGFVSGMAVVTILLSAVLYTFDIFV >gi|237663592|gb|GG668926.1| GENE 242 247828 - 249252 1562 474 aa, chain - ## HITS:1 COG:no KEGG:EF3011 NR:ns ## KEGG: EF3011 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 474 1 474 474 957 99.0 0 MSRNDLFKQPLDTINVGIDFIHEDMKKQGIPSHQVNWAPPANGDPELLKLLDQLKNPTLY EKIQQANEEAVTRIIQSKPILVGFDKAINVMPNMTETTILHAGPPITYENMCGPMKGAVQ GALVFEGLAKDLADADRVARSGAITFSPCHEHDAVGSMAGVTSPNMYVHIIKNETYGNTA FTNLSEQLAKVLRFGANDQSVVDRLIWMRDVLGPLLHDAMTFCPEGIDLRLMLSQALHMG DECHNRNVAGSTLLVQALTPYMVQTDFSREQLKEVFEFLGSSDYFSGPTWMGAAKCALDA GHNVENSTIVTTMCRNGVEFGIRVSGIGGNHWFTGPAQRVIGPMFAGYTQEDAGLDMGDS AITETYGVGGFAMAAAPAIVPLVGGTVAEALNYSKEMLEITTKENPNVTIPVLDFMGIPS GIDILKVLETGMLPVINTAIAHKEPGIGMIGAGLTNPPANVFNEALKALVAKIN >gi|237663592|gb|GG668926.1| GENE 243 249239 - 250798 1904 519 aa, chain - ## HITS:1 COG:ECs0369 KEGG:ns NR:ns ## COG: ECs0369 COG0074 # Protein_GI_number: 15829623 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 515 1 514 515 514 52.0 1e-145 MTIQTVIKENAYFDSVTLMTISTRANELAGVKTAMIGMGTDMNLEVIRNVGLYTPALEHV TTGDLLIVLDLDDQANSEEILQQVDELFTKKKKTASSEVTYKTLDSALHEEPDANLVVIS VNGKFAAREAHKALDQQKHVMLFSDNVTVDEELALKQKAHEKELFVMGPDCGTAIINGVG LCFANEVRSGDIGIVGASGTGSQEVSVQIHKYGYGISQLIGTGGRDLSAEIGGLMMLDGL DALMADEQTKAILLISKPPAPEVTEKILKKLAVSTKPVVIYFIGSEQTERKIDNVTFATS SLDAVQKVIQFSQTQEAETSLYQNPTGATLTTIQQQQAPSQKFVRGLFCGGTLCDELLYA LTEVSDDVYSNIHKIPERQLANPDHSQAHTLIDFGDDRFTEGRPHPMIDPTSRITRILQE AKDPEVAVLALDFELGYGSHENPVGVLAEALKEAKAIAKSDGRELAIIGYVLGTEEDPQD IHEQRKILEDLEVLVVDSSHQLCEATKTFVKGANEHEQK >gi|237663592|gb|GG668926.1| GENE 244 250776 - 251642 531 288 aa, chain - ## HITS:1 COG:no KEGG:EF3009 NR:ns ## KEGG: EF3009 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 288 1 288 288 555 99.0 1e-157 MTKILAYDQTILSKLPHQTLTSLQCFTHAINYGHVDTQEILLTISTHPEHIAPNTIILDE KKLSHFADLPVQIEPLFIRLGRRQLTLADAQIWQPTPLYLTPSKTKIAIFLTYIQQTRFN PWQALFPASSSTFLFDSYSRTQIQKEMVHFQQAWAQKSFKIALDCLTKILGLGIGLTPTG DDFITGLLASFSALQQLPSNFQQLAVLAKERTNAVSYAEIHEAVNERFSQLVQRVFLSIE SGNTNEMAQAVSALEEVGSTSGSDILCGIIFGLKLFCEENNHDNSNSN >gi|237663592|gb|GG668926.1| GENE 245 251773 - 253431 1221 552 aa, chain + ## HITS:1 COG:BS_yunI KEGG:ns NR:ns ## COG: BS_yunI COG2508 # Protein_GI_number: 16080295 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Bacillus subtilis # 2 530 1 507 531 120 23.0 6e-27 MLKVSDLLTLEELPGITLVAGHKNQDQPILKVNILENPDILDWLTAGELLLTTGYIFKDD RKLQKNFLKELAKHHCAALGFKTQRYFEEVPPDLIKLADEMNVPILAIPYNYTFSQIADV LKSRVTLEQFDMNAQETALHNKIYQILETGSSSFHLLQDLAETIQNPVLLLNDHFEGVNF FDLPKNPIRISSILEDRQETSEFQKQLLEQSHPLLRFYQEPIHLQLKLQNQVVPIEIYPI KKKNVILYYLLVWNTLAPLRPVDVAHFKITAHYLLLQLQLEYSRKFEEYQQRNKLFFKLI AHEKRDQAVFQQFQQYYRLTIDKPYAILLISLTLNERQRQERMSILGNQLNQVILGDKQK IVCIEIDSSFVLLVEDPPEKEGDYLKMMQRLAQSSINQLMKVQEDVELFLTIGPKIQGLT HIHESYQQAIDVLAFQRQFVAEKPEMRIASYANFHFRQTLQRYFLEEGQATLRKKYLQPL QKSDQQQHTDFVHTLNVYFQSKRNLSQTAKKLFIHRNTLLQRLEKIEQLVLLDFDKEVDL LALEVALFVGFE >gi|237663592|gb|GG668926.1| GENE 246 253535 - 255124 1683 529 aa, chain + ## HITS:1 COG:SPy1906 KEGG:ns NR:ns ## COG: SPy1906 COG0286 # Protein_GI_number: 15675719 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Streptococcus pyogenes M1 GAS # 5 521 8 522 526 565 56.0 1e-161 MGAELNQRLFSAADNLRSKMDASEYKNYLLGLIFYKYLSDKLLQTVVTLADESLEEYDTP TKQTELYKELLADEDSRQDLVDTLVDTLSYDIEPDYLFSSLAEQAKQNVFQLDDLKKAFV YLSSNYKQFNGLFDDVDLQSKKLGSDDQQRNVTITEVLKKLNDIDVTAHEGDVIGDAYEF LISQFASEAGKKAGEFYTPHQVSDMMARIVALGQEDKKLFSVFDPTMGSGSLMLNVRNYL NYPKSVKYHGQELNTTTFNLAKMNLILHGVEAEDMNLRNGDTLNKDWPTDEPYTFDSVVM NPPYSAKWSADASFLDDSRFNRYGKLAPKSKADFAFLLHGYYHLKDSGTMAIVLPHGVLF RGAAEGVIRKKLLEDGSIYAVIGMPANLFFGTSIPTTVIILKKNRDNRDVLFIDASKEFT KGKNQNKLATEHIDKIVSTYIERQDVEKYAHVATFEEIVENDYNLNIPRYVDTFEEEPPV DLVALNNEIKSTNQEIKKVEAELLAMLDDLVVTEETQALIDATKEVFGG >gi|237663592|gb|GG668926.1| GENE 247 255312 - 256325 540 337 aa, chain + ## HITS:1 COG:lin0523 KEGG:ns NR:ns ## COG: lin0523 COG0732 # Protein_GI_number: 16799598 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Listeria innocua # 44 337 113 397 397 127 32.0 2e-29 MLSVSEALSYDEDAIGIGRKGTINNPYILKAPFWTVDTLFYAIPKNNFDLNFIYSIFRKI NWKSKDESTGVPSLSKTTINAVTVYIPSGSEQQRIGEFFKQIDNTITLHQRKLDQLKELK KAYLQLMFASTNTKNDKLPKLRFTGFKGYWELCKLSDISDKVKEKNKHGKFTETLTNSAE YGIINQRFFFDKDISNANNLDSYYVVQNDDFVYNPRISNFAPVGPIKRNKLGRTGVMSPL YYVFRTHSIDNNYLEKYFDTVYWHHFMELNGDTGARADRFAIKDSIFVEMPIPYPSTEEQ KKIGIFFKKLDQSITLYKNKLNQLKTLKKSYLQNMFI >gi|237663592|gb|GG668926.1| GENE 248 256448 - 256939 519 163 aa, chain + ## HITS:1 COG:no KEGG:MYPU_3700 NR:ns ## KEGG: MYPU_3700 # Name: not_defined # Def: hypothetical protein # Organism: M.pulmonis # Pathway: not_defined # 7 133 11 140 292 98 42.0 9e-20 MANSLQEEYQKLVKMNYSELVTYLNNKYGSVPGSYFRTPTCKSKNPKITRSMEGSEIHHV GEDNYPNLSTTDYALVAPWEEQLPDRLVYCNLLEHTLLHTLISEKYGTVQPYFAFKAQLV QDIINDYEFQKDWLKVVYSQMKDNKELLIELYDRVNAKSLLNL >gi|237663592|gb|GG668926.1| GENE 249 256975 - 257904 762 309 aa, chain - ## HITS:1 COG:lin0524 KEGG:ns NR:ns ## COG: lin0524 COG0582 # Protein_GI_number: 16799599 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Listeria innocua # 1 309 1 309 309 489 80.0 1e-138 MVKRKRTEQLFHEYFSEWVELYKVGAIRDISLQKYYIAEQRLAELAPGLKVKHLDRQRYQ QLLNDYALTHERQTTMDFHHQLKGAILDAVDEGLISKNPTRKIVIKGKAPRPKKSKFLNQ FEVQALLKELELGEQLNWDWFILLVVKTGLRFSEALALTPKDFDFSKQKITIEKTWNYKN PTGFFQSTKNESSKRKVQIDWQTAMQFSQLIRNMPPMEPIFVKGRVFNSTINSRLKVLCK RAQIPVITVHSLRHTHASLLLFAGVSIASVATRLGHSSMTTTQETYLHIIQELENQDNDK IMRHLAMLM >gi|237663592|gb|GG668926.1| GENE 250 257988 - 258923 562 311 aa, chain - ## HITS:1 COG:L0310 KEGG:ns NR:ns ## COG: L0310 COG0732 # Protein_GI_number: 15672634 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Lactococcus lactis # 11 311 110 407 407 129 32.0 6e-30 MLGVPTDTVFSGFVLRGRARSVDPMDNLFKRYVFFTESFRNEMVKKSSMTTRALTSGTAI KEMYVQYPSSKDEQHKIGAFLAQIDDTIALHQRELDQLKELKKAYLQLMFPVKDERVPKL RFADFEGEWEQCKFFDMWEKSSDRNKELKYSSKDVLSVAKMTKNPVERNSSDEYMKTYNI LHYGDIAFEGNKSKDYSFGRFVLNNLQDGIVSHVFIVFKPKVKMDIDFMKVYINNEYFMK HHLVKATTKTLMMTTLNVQDMNKQKLRIPSLNEQERIGKFFKELDHAITLHQNKLTQLKS LKKSYLQNMFI >gi|237663592|gb|GG668926.1| GENE 251 259299 - 262442 3171 1047 aa, chain + ## HITS:1 COG:SPy1904 KEGG:ns NR:ns ## COG: SPy1904 COG0610 # Protein_GI_number: 15675717 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Streptococcus pyogenes M1 GAS # 8 1043 8 990 992 550 36.0 1e-156 MKLSVNDEATVENKLIAILGEDRNQWTYRADLKSEQDLWRNLREKIIQNNLAAIGEHPLT DQEFERIKTGLLERTRTPFEAAKWLKGENGIAKITIEREDASLGTMSLILYSNRDIGGGI SSYEVVNQIAKKNTNSAKHDRRFDVTLLINGLPIVQIELKQVTAKDGVFQAFNQIKKYAE EGMFRNNIFSTLQLFVVSNEQTTRYFANALPQFMHKKFLFSWRTKDNKKVENLYEFCRQV LNIPDAHRLIADYTIVSEEQDNKVLMVLHPYQIHAIEALYVAASKHTSGYIWHATGSGKT LTSFVSTKLLARKPGIDRTIMLLDRKDLDNQTTSEFTKFASEFNTGISSGDGKANSLIVG TGSAKELSKTLLADANSNVVIVTTRQKLDAALKYARKQEEQKGTNRFQKLMGQHIVFIVD ECHRAVSAENMMDVKKVFPRSTWFGFTGTPIFEENKKQAQGQLARTTHDQYGEVLHTYTI KNALEDKAVLGFQVEHEDTIDRESLYERIYTILSKETKYAEYTPEELADIVETMDDIQKE KMLDRSVYESDKHIQEVIHKIFRPNNAYTKFDFGNGRPRKSAILTTSSIDMAKRYYHAIK EMTAKENWLEQEFPNHQIRIGRTMEDPDFPRIAITYSLEENAENISAQQDELAKIMAEYN AYYGTSWTLQDIERYNGDINNRLARKKAEFKEFGRHVDLVIVVDRLLTGFDAPTIQTLFV DRNLEYANLIQAFSRTNRTYPDKTKGLVVTFRKPHTMEQNVANATRLYSEAKEESGLIYP TYKESKQRFKKAFRKMQEFNPEEIDENQPIDVRIDYVQSFQALSNSYEALVTYDEYNDEM EKSPALAEQVHLIEEQIGTYETIKGSLVEVEPGTDKDFSEIEFYSDNHAKMYDIDSSYID QLLGNYSANSQGVREEIEKALQKLNKTECVKEVYREILNAMDNEKVDQKEDVFVLKRRYF TGTRNQVIAQFAQEWFVSEDQLHSSAIQYMIGMNPIPNMGDIISSKDFESYKATHPEAKP FKYPQQMKRAWRQTLDEYLVPLEDELR >gi|237663592|gb|GG668926.1| GENE 252 262458 - 263129 522 223 aa, chain + ## HITS:1 COG:no KEGG:EF3006 NR:ns ## KEGG: EF3006 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 218 1 218 218 378 96.0 1e-103 MNLSHQDFNLFNREIFTFKQLKEQQTPAEIDALKQTYKQHWEKWKALNLAIAQSLPAELG ITKPKIESWTNGWNLRSHFWAAYRSEQRQAENACLALLLNKKQFQVYLMFQHYKSEERAG SVVAYNQLLNRLEAWSQTIDCEGYYIWPQEEHELVDHLPLKDYLADEKQRKILEERIGNH SFQIGKLWFATEKLETIEEKSCQALQELAPLYVALHEEKNFFD >gi|237663592|gb|GG668926.1| GENE 253 263291 - 264379 1061 362 aa, chain + ## HITS:1 COG:L1004 KEGG:ns NR:ns ## COG: L1004 COG0659 # Protein_GI_number: 15672032 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Lactococcus lactis # 81 360 1 278 460 288 58.0 1e-77 MFKKYTQMIRDEFKGYNQKKLKKDFLAGLTVAAVALPLALAFGVSSGATAAAGMITAIIA GIVIGSLSGGFYQISGPTGAMAAILMSIAAVHGMQGILLATFLAGIFLLLAGILRLGSLT SFIPSPVITGFTSGIAIIIALGQLDNFFGVRSEGHNLIEKISSYRSLGFDLSIPTTVMSI LVVLGLVFFPKKWNAMIPASLVMIILATLATVVFQLPVATVGKIPTSIFSDTRLELGSLQ LSAFQDILVPSISIAMLGMIESLLCGASAGRMTGKPLDSNQELVAQGIGNLILPFFGGVP ATAAIARTSVVIKSGAQTRLAGIFHAVFLLLSMLLLSPVMSKIPMPALAGVLVVTAWRMN GR >gi|237663592|gb|GG668926.1| GENE 254 264436 - 264906 475 156 aa, chain + ## HITS:1 COG:L1004 KEGG:ns NR:ns ## COG: L1004 COG0659 # Protein_GI_number: 15672032 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Lactococcus lactis # 1 148 302 452 460 98 38.0 4e-21 MVATVIFDLSLAIVLGVLAGCLFFIAKSAVITINVEEVDWSRMGLVPTDCTENWVVVYLS GPLFFMSSERLKQTLLQLETKSGVVFSMRGVPSIDSTALDILEEFCLAAEGRGQQVQFAA LQPEVEKMIRTIQGNQEKEYHFSVAEFLQTVHVAEQ >gi|237663592|gb|GG668926.1| GENE 255 265070 - 265762 592 230 aa, chain - ## HITS:1 COG:no KEGG:EF3003 NR:ns ## KEGG: EF3003 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 230 1 230 230 320 98.0 2e-86 MKKLVCVILVIFLTGCSSQKANEPKKQENSTNHTTSMKSSTNHYSSSIETSSNNKLKETS ESASTTQDSAKSKNEVSTNVEEANSLEATPYAVDLSSLNNPLVFNFKGMNVPTSITLENL NSTPTATFRTKLFGAENGQVKEAINKYELSINTIPTKEIRIFSADDNSIRTVKVNTELIL GTNISSNDEQNRSGTLYLFNNKNGSISLITPNYAGNVTDDQKDVMLEVIQ >gi|237663592|gb|GG668926.1| GENE 256 265955 - 266407 561 150 aa, chain + ## HITS:1 COG:BH3077 KEGG:ns NR:ns ## COG: BH3077 COG1846 # Protein_GI_number: 15615639 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 150 1 150 150 197 72.0 7e-51 MTDILREIGMIARALDSISNIEFKELSLTRGQYLYLVRVCENPGIIQEKIAELIKVDRTT AARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYPIIVRENQHSNQVALQGLSEVE ISQLAEYLVRMRKNVSEDWEFVKKGNTRNY >gi|237663592|gb|GG668926.1| GENE 257 266426 - 266938 531 170 aa, chain + ## HITS:1 COG:BS_paiA KEGG:ns NR:ns ## COG: BS_paiA COG0454 # Protein_GI_number: 16080268 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Bacillus subtilis # 3 170 4 171 172 164 50.0 5e-41 MGEIKQLTIEDAPALQEISIETYTDTFGPYNTPENMQAYLVEAYNLEKLQKELANPHSDF YFIFVDNQLAGYMKLNRETAQTEPMGPKKLEVERLYILPAFKGKKLGTQLLELAEEKACE FGKNALWLGVWEHNDAARAFYKTIGYRYYSQHSFFMGDDEQTDFILLKEL >gi|237663592|gb|GG668926.1| GENE 258 267530 - 269026 1479 498 aa, chain + ## HITS:1 COG:ECs0572 KEGG:ns NR:ns ## COG: ECs0572 COG1953 # Protein_GI_number: 15829826 # Func_class: F Nucleotide transport and metabolism; H Coenzyme transport and metabolism # Function: Cytosine/uracil/thiamine/allantoin permeases # Organism: Escherichia coli O157:H7 # 11 473 3 462 463 446 53.0 1e-125 MEKNVSQVTAQEETALKARGYNEDLLPSSPKQRTMGARNFFTLWMGSIHNIPNYAAVGGF IFLGLSPLQVMLAVVLSSFIVATFMNLNGVAGSKYGIPFAMHLQSTYGSLGAKLPGFLRG CVAAIAWFGLQTFTGSLALLIILGKFWPNFLQIGGSFQFFGLRLPELMAFTLFWLLNVAI GFGGSKILNRFTAILSPLIYVVIIGLTIWAIRAGGGLTPILSYQVSGAIRSVNPLVAYLI IFNSVVAVWSAPGASVADFTKNARSTRAQVVGQTAGLVVGYGIFAFSSVVILLGGSLYFG IQEWNILNIIDRLDNVAVVVLAMSVFLLTTISTNATGNIIPAGYQLAALFPKKMTYKKGV IIASVISFLIMPWKLMENADSIFIFLNAIGAVLGPVAGVMIANYYFVQKQQIDLNDLYVD KHKKEEANPFYGLNKPAYVATILALVLSLSGQFIPQVKIIADISWFVGFATGFVLYLVLK KWTWDSKKVKETAYQEGK >gi|237663592|gb|GG668926.1| GENE 259 269027 - 270391 1465 454 aa, chain + ## HITS:1 COG:ybbX KEGG:ns NR:ns ## COG: ybbX COG0044 # Protein_GI_number: 16128496 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Escherichia coli K12 # 1 452 1 448 453 512 54.0 1e-145 MQAELVIKNGLVILETGEVITDVAVQGGKIVAIGQDLSGERVIDATGLVVSPGMVDAHVH ITDPGGGYRDEWEGYVTGTAACAKGGVTTFMEMPLNQIPATVDKTSLEIKYKAGENKLKV DVGSFGGVVPTNLAGGIQELDEGGVSGYKCFLGTCGDRSIEGDFQNVDDYSLYEGMKQVA KTGKVLAIHAENAPITDKLGALAYQNGETTLAAYVATRPVFTEVEAIQKAILFAKETGCR IHICHVACQEGVEEVLKAQAEGVDVTCETCTHYLYFTTDELDAIGPVVKCSPPIRDADQQ AALWNHVQTGGIAFVTSDHSPCTPDLKDTTNAFEAWGGISGVQNNVDVLFDEAVQKRGLS LKQFADMIAANPADRYHLAQKGRISIGKDADFVLIKPNAPYILKAEDLEYRNKISPYIGR EIGTQVIQTILRGETIYEQETGVTEAFNGVFIKN >gi|237663592|gb|GG668926.1| GENE 260 270573 - 271796 1309 407 aa, chain + ## HITS:1 COG:ECs0578 KEGG:ns NR:ns ## COG: ECs0578 COG0624 # Protein_GI_number: 15829832 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli O157:H7 # 7 407 5 410 411 509 59.0 1e-144 MDLEKVLKQRIEELSAIGSDPAGGMTRLLYTDSWLAAQKYVQSQTEAFGLETQFDEVGNL FCRVAGTEFPQETILTGSHIDTVVNGGTLDGQYGVIASMTAVQYLLDKYGKPRRSLEVLS MAEEEGSRFPTVFWGSKNVVGEAKREEVVDISDNEGKKFVDEMHRQGFDFRQEQTRREDI EAFVEIHIEQGNILENEKLQVGVVHSIVGQRRYTVNLKGQANHAGTTPMSYRHDAVYGFA KICAEAIDRANEIGDPLVLTFGKVIPKPNTVNVVPGEVEFTIDCRHTDAAFLRHFTGELE ERMKTIAQELGLTIAIDRWMDEAPVPMNQAIVEVIEQKAKEGKYQYRMMHSGAGHDSQII APHYPTAMIFVPSIGGISHNPAEATAFPDLVEGVKLLADTLYELAYK >gi|237663592|gb|GG668926.1| GENE 261 271818 - 272603 1007 261 aa, chain + ## HITS:1 COG:STM0526 KEGG:ns NR:ns ## COG: STM0526 COG3257 # Protein_GI_number: 16763906 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in glyoxylate utilization # Organism: Salmonella typhimurium LT2 # 1 258 1 258 261 296 58.0 2e-80 MGYKNNRVGYQKELLTSRAVIKKDNYAIIPHDGLVQNAVPGFENVDVSILGSPKLGATFV DYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDGQETHELEAGGYAYFTPEMKMYLA NAQEADTEVFLYKKRYQPLAGHQPYKVVGSIHDQQPEEYEGMTDVLLWSLLPKEFDFDMN MHILSFEPGASHAYIETHVQEHGAYLISGQGMYNLDNEWYPVEKGDYIFMSAYVPQAAYA VGREEPLMYVYSKDANREPEL >gi|237663592|gb|GG668926.1| GENE 262 272721 - 274346 1325 541 aa, chain - ## HITS:1 COG:BS_yunI KEGG:ns NR:ns ## COG: BS_yunI COG2508 # Protein_GI_number: 16080295 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Bacillus subtilis # 1 538 1 526 531 183 24.0 9e-46 MKILAEVLALPRFSDLQLLSSHSNLTQPLESVEITETPDVADFIPKNVMILTTAMIYKDD QEKLKPFIDSLKQAECTALGIKVGRFLDEISPEIVAYASAVDLPLIKIPSTQPLGGLLHE IVGYLRDSKTEQMSAAFDIQKRFSTLLMQDVDATRFIAEFAKILNAPIILLSPWQQVIAH SNYFYGNQKSAEFFIEQLSKDHFQQLAQEKKIFRLQDERQENIQVAGFPIRVNDYFPYYL LVLSPEQIPYPISEFAIDQAILVLTFMLFKNQKIAESFEHLKTDFLDRLLDTHQKALSKH QNWLELWKNYRLINSDYYQLAIVYGVTKPENETHIRYQQAEGQLIFQWLKEQLPEILPDV ALFKLKNQNKSILIFQSKKNDHLMILQNLAERLQQALPITIRFALGNAYENLEDLPNSYI EASSTLEASLHAQKPATVQLFHPKGLAGLFEKIGTEDVEYFCQQQLKELAYPTEPTLQEL RKTLKVFLDFNCEITKTANALYLHRNTIKYRMNQCEKLLGTSIQEPETSLLLRVALELSE K >gi|237663592|gb|GG668926.1| GENE 263 274518 - 275726 1252 402 aa, chain + ## HITS:1 COG:BS_yurG KEGG:ns NR:ns ## COG: BS_yurG COG0075 # Protein_GI_number: 16080305 # Func_class: E Amino acid transport and metabolism # Function: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase # Organism: Bacillus subtilis # 10 402 12 409 416 435 54.0 1e-122 MYQQPNFVRRTIMTPGPVEAHPSVLRQMGQPILGQFDPEFLQIMDEVREMIKVPFATKNQ QAFAIDGTSRSGLEAGLFALIEPGDKVLVPAYGRFAYLLGEICERARAEVIYLEKDWLAP FEQTTVIEAIKEHQPKIVAMVHGETANAQMQPLDQIGAFCRENEIFFVVDMVATYGGVET KVDDWKIDIAVAGTQKCVSVPSGLSLITYNQRVADYLAGRYQKELGLGADARNERFIQSN YLDLSQLEKYWGPERLNHHTEATTMIYGLHEGLRLLLQEGMENVYARHRKNDRILVESLQ KMGLEIFGKLDTKTPTVIPVVIPEGIDGEKVRSLLLDHFKVEIASSFGDLKGKIWRVGNM GYSSREDNVLHFLSAFETVLKHQGYQFEGGSGSTHALAEYLN >gi|237663592|gb|GG668926.1| GENE 264 275824 - 277083 1332 419 aa, chain + ## HITS:1 COG:STM0520 KEGG:ns NR:ns ## COG: STM0520 COG0477 # Protein_GI_number: 16763900 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 414 1 408 415 380 49.0 1e-105 MTDKTKSSLAYWKKIVILLCMGWVIIWIYRSALSPVYPQIRASLNGNASDTALGSISSFY FLGYVVMQIPAGFLVDKIGKKRVLIPGFILFTLAALLIAQAQTIGTIYLGSLLAGLGCGS FYGSAYSLTSQNIPQAKKSFATAIVNSGSAVGSGLGMILSSYLVAQKGLPWQVMMYISAF MIICMLVAFQVIIRNHKEDMALIQPTVVDEKDNEAVKEKVPFKKLFAPHMLFAYILYFGT CYAYYMIVTWLPNFLSTERGFQGAAIGLSSSLVAFASIPGALFFSRLADKYMHKKVQFIV VLEFLATAMLLLTVQVSNATLLLIALIMYGLLGKLAVEPIIISWLGENAPKIGIGTTLGV FNFFGMMSSVIAPALTGKISDTTGSKVMGFYIAVVILLIGTILFMLVNLKKRGADSSNK >gi|237663592|gb|GG668926.1| GENE 265 277129 - 277389 363 86 aa, chain - ## HITS:1 COG:SA0045 KEGG:ns NR:ns ## COG: SA0045 COG1937 # Protein_GI_number: 15925752 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 6 85 5 84 86 67 46.0 5e-12 MTEEKKKVLNRLRRTEGQIRGIQKMIDEEKECIDVITQLSAVRSSIDRVMGMIVAENLKH CFENPEKDPKEQEERLAQAINMIVKK >gi|237663592|gb|GG668926.1| GENE 266 277558 - 277872 387 104 aa, chain + ## HITS:1 COG:L193718 KEGG:ns NR:ns ## COG: L193718 COG0607 # Protein_GI_number: 15672767 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Lactococcus lactis # 2 101 1 101 102 93 51.0 7e-20 MLFQLFKKTPSISTKELQSRLSKEITLLDVRTPSEYRAGHIPQAINVPLNKIPAYNKSAN EVYVICQSGMRSKNAAKILARKNYHVINVRGGMSQWSGQIKGGK >gi|237663592|gb|GG668926.1| GENE 267 277873 - 279522 2079 549 aa, chain + ## HITS:1 COG:L194050_1 KEGG:ns NR:ns ## COG: L194050_1 COG0446 # Protein_GI_number: 15672768 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Lactococcus lactis # 2 456 4 456 456 588 67.0 1e-167 MKIVIIGGVAGGMSAATRLRRLMEDAEIVVMEKGPFVSFANCGLPYYVSGEIAEREQLLV QTPEALKARFNLDVRPHHEVVAIDPIEKVITVKHETEILTEHYDKLILSPGAKPFVPLIT GLAEAKNVFSLRNVPDLDQIMTALTPETKRAVVIGAGFIGLEMAENLQKRGLEVTLVEKA PHVLPPLDEEMAAFVKVELSKNNVQVITGQSAVAFEEEGQVIRLEDGQTLASDLTILSVG VQPENTLAVEAGVATGLRGGIVVDEHYQTNQPDIYAVGDAIVVKQQITQEDALISLASPA NRQGRQVADVIAGLERKNQGSIGTAIVRVFDLTAASTGLSERAAKAAGLTTAVVHISGKD HAGYYPGATDLQLKLVFHPTTGEIYGAQGIGAKGVDKRIDILATAIKGQLTIFDLPELEF TYAPPFGSAKDPVNMLGYAAMNLVEGLSENVQWYELSNELAKGAVLLDVRNPAEQANGQF KNAVSIPLNELRERLEELDKSTEYIVSCHSGLRSYIAERMLKQAGISVRNLDGAFALYRM VKPEELENV >gi|237663592|gb|GG668926.1| GENE 268 279515 - 279814 462 99 aa, chain + ## HITS:1 COG:lin0618 KEGG:ns NR:ns ## COG: lin0618 COG0607 # Protein_GI_number: 16799693 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Listeria innocua # 1 99 1 99 99 89 41.0 2e-18 MYNTIGMPEFYQEAKRKKLPIIDVREEMEYQLGHVPQAINLPLSTLTENYQQLDKNQPYY LICQMGSRSAQACAFLSQQGYQVTNVLGGTSGWLGQLEQ >gi|237663592|gb|GG668926.1| GENE 269 279986 - 281152 1523 388 aa, chain + ## HITS:1 COG:BS_yknX KEGG:ns NR:ns ## COG: BS_yknX COG0845 # Protein_GI_number: 16078499 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Bacillus subtilis # 11 383 2 376 377 90 27.0 5e-18 MKKSGQKKRNKKVWFGIGAAVVVVGFIGAKTVFSSKEVEPEYTTYTITEMASLKLDGQVS FLDTRDIFFDPSLGKIAEINVENGKEVKKDSPLLTYNNSDIQATETEQANAVNRNNLQVQ QAQENVNLATQKYNEALNKVAAAKQKLNTAKEAEEKETLNAEIQQLNEAVSAANSEVAQA NQALQLANSDAVGAANTLEQTRGKVNTVVTAPIDGQVTVDASAMSSTDKPVIKIATQKKN IQGKVTEYDYDKLQTGEEVTVTTVGSGKTAPGKIVSIAQTPIAKNEGNPVVSYQFTVEGD FPWAEGLSTSIAVPQKQMIIPTAAIQKDGEKEFVYVYKAGKAKKTPIETETNLGRKVVKS GLNWKDQVIANPNKELKDNQDVQVAAND >gi|237663592|gb|GG668926.1| GENE 270 281145 - 281819 351 224 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 221 1 220 245 139 36 1e-31 MIKLAHIHKYYYSEEETLHVLDDINLQVEAGEFLAIMGPSGSGKSTLINLLGFIDKKFEG TYLFEDREIGDFSDKELSRIRNEAVGFVFQNFSLIETLTVEENIELPLLYSGLTPKEAKD RVHEVLTKVGLPDKGKKHPKQLSGGQQQRVAIARAIVNRPSFIIADEPTGALDSKTSEEI LTLFQQLNNEGVTIILVTHDEETIEYCNRLIKVRDGKILEEVLT >gi|237663592|gb|GG668926.1| GENE 271 281816 - 283024 1282 402 aa, chain + ## HITS:1 COG:SA0193 KEGG:ns NR:ns ## COG: SA0193 COG0577 # Protein_GI_number: 15925903 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Staphylococcus aureus N315 # 6 402 7 392 392 186 34.0 7e-47 MKRSIIWKTAFRSILKNKRRSLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLSAEKQKE NVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTLNFQAGP KNLSVTYELADKTTKELLAGRQLNDGDNAKLDKTVVVDELVAKELYQDPTAAVNRTFPYK EQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPGYQPDQVL KETIKALSQQGTMKNSGTYQEYNVKDTIKEMGSLLNNLTLFISAIAAISLVIAGVGVMNM MYISVSERIKEIGIRRALGGTASDIKKQFLTEGIALTLIGGITGYLLGMIIAYLASMALP FSVRPDLMTVSLAIGISVFIGVVFSYFPASAASKKDLIDIMK >gi|237663592|gb|GG668926.1| GENE 272 283406 - 284071 534 221 aa, chain + ## HITS:1 COG:no KEGG:EF2984 NR:ns ## KEGG: EF2984 # Name: not_defined # Def: transcriptional regulator, putative # Organism: E.faecalis # Pathway: not_defined # 1 221 1 221 221 403 99.0 1e-111 MKIMVITKNILSETAFQNRLQHLDHQVFCTTCLIGEIKESHLFYRKFDAIILSETIPRKE QYLYLKELARVKTPLFLRSEDIPTSEELSISYQYGILNWLRLDATLDTLRENLLLAELNK PIQREDEKLNVEGIKLTATERALLAVLYSTPKEHLPMERLCKLIYDTEETANNRKKMTKQ LTKLNKKIQVGGFKKQGIQNTRYKGYKLHPQLLPYIGELFT >gi|237663592|gb|GG668926.1| GENE 273 284168 - 285616 1738 482 aa, chain + ## HITS:1 COG:L169390 KEGG:ns NR:ns ## COG: L169390 COG0154 # Protein_GI_number: 15672148 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Lactococcus lactis # 1 482 4 499 499 374 43.0 1e-103 MKDGLYWVQQLKEQKVSRTELLKDIEKKVQKLNPKINGFVTFDSQEAEATYQKNKHQDTL FAGLPFPLKMLGQEKAGWSATAGSQLFKNSTATTTSNFVKQAETIGLMPLGQTNAPEFGF KNITDPALYGPARNPWNLEHSPGGSSGGAAAVVASGIVPIAGASDGGGSIRIPASFSGLI GLKPSRGSMPVGPEGWRGWQGASIDFALTISMRDTKALFYGLRGSHSGAPYQAPLAEWQT HPKKQRLKIALCTASPIGSLISPEATQAAKQAADFLAAAGHEIIEIPYPVDGAALIRSYY QMNGAETTAMMNSIQQGLGRPIRKEEIEPFSWTMHQFGQKIPAATYVHSLQLWDQAAVTM EELFQKFDLFLSPTTAFSAPKINEDLQSEHIRQRMAQAAELTEAELAELIYDYFDKSLQL TPYTQLANLTGQPAISLPTHVTATGLPLGIQLLAARGREDLLFQVGEQFEQEGKFKLPES YR >gi|237663592|gb|GG668926.1| GENE 274 285682 - 286209 553 175 aa, chain + ## HITS:1 COG:YPO0455 KEGG:ns NR:ns ## COG: YPO0455 COG0406 # Protein_GI_number: 16120784 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Yersinia pestis # 2 130 4 137 215 96 38.0 2e-20 MLYVVRHGETDYNVARRICGHAEAQLTEKGYQQAELVAEKIAKQGIQIDRLLASPLKRAQ ETARKIAERNQLTIETEPRLIEMNFGIYDGEPIETTAFQENRSEISLPFPEGESVLDVAG RIYPLIEEALASEETYLFVCHNAVMRVIDNYFNGKKIQDFLDFHCENTQLVQYGE >gi|237663592|gb|GG668926.1| GENE 275 286330 - 289143 2025 937 aa, chain + ## HITS:1 COG:STM3773_1 KEGG:ns NR:ns ## COG: STM3773_1 COG1221 # Protein_GI_number: 16767057 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Salmonella typhimurium LT2 # 28 462 30 458 460 288 36.0 3e-77 MRIDNIHQALKKFHVQNPSSKATLLPATASQLSQASGYTRTAVSEELSELVRKDQVVKVK SRPVLFFDKDYLEEQFPFFKSSTCYDSLASLQEDIYQQTEQIHKKKQLLKMNPFANVIGF DGSLADAIKKLKAAILYPPNGLNILLTGESGVGKTLIAEQLHQFYQVKMNKEVPFIYFNC AEYFNNPELLTSHLFGYKKGSFTGAVNDQKGLVELADGGFLFLDEVHRLTSEGQEKLFTV LDKGYFTRMGEAEKQRNVSIKFIFATTEAVNQHFLKTFLRRIPVTLAIPALAERSMKEKI QLILSFFLEESQRIQKNIHIRYEALKQLTFTHFEANVGELKAAIQFMSAQAYLEVFDQLT ETICIEANEGTVKEQPDVESLLAFNEWIPNDGLTIQYNHFYLSSQELLKSESLKNDRFYN FLLKEYADLKKLTLSTEDALAIMQNKVEQLYDMDIFAQEPLALEAIDETLQPKIQEAIVF FEQLIQEKLTEDFQNILIVHLYSAVFYSAQMNETFYSDTKNIYSGKVTQYQAAKTMVDFL QTLFGISFADTEILFFDLFIRKVTAKKRAHSVEENCGVIVVAHGAATASSMVEYTNLLFS TTVMRAVDMPINQSVEETLEKVRTIVKQNQYKKIILMVDIGSLVYFGNAISQTFQMEVLL ISNINLLTLLEVAREVIYESTAFEYLLPVLKEKNHRALICSKGRFNEAKVLIISCLTGMG TAIKIEQLLLKTFPNELLTNVRIITLEKREVEDIDRLHSFIRKEEKIVGIIGTVKTEVPD IPFISLQDLLSKRGIQLVFELLGHHLEEKQNQELLKKVSAKYIQGLSIEAITDLLTVLNP TTISIELAKIYSDICLQTKIKSDEKILLRFIIHCACMLERQLLNPEYDPTAYEVSYRELP EAVSVIKMAFRPIEVSYNLLIPPLEVRYIYELLFEKA >gi|237663592|gb|GG668926.1| GENE 276 289215 - 289616 434 133 aa, chain + ## HITS:1 COG:STM3772 KEGG:ns NR:ns ## COG: STM3772 COG2893 # Protein_GI_number: 16767056 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 6 105 10 107 141 86 48.0 1e-17 MENEPILLLTHNGWGLELVKSVQMIVGEVTNVHEVALQAEDSLGDYLERVTEKIEQLTWH NQLLILTDVKGGTPSNVALRLSKDYDLLIVSGLCTSLLLESVMKQSGPGFRLQDAEMIQQ AAVDSCQILEIPK >gi|237663592|gb|GG668926.1| GENE 277 289636 - 290130 656 164 aa, chain + ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 164 50.0 4e-41 MSKIVLTRVDSRLIHGQVVTKWLQQSGANEILVVSDELEQDEFLQSIYLMAAPPGVSVVI KGIENAKEYWESQEKEEKKVLFLVPDLTTLKAMVDQEIIKEEIQVGGLGGGPNRKNVLKN INLSEEDVAILTELLTKGIHVFFQAIPEENPLPIQKLIEKYQSL >gi|237663592|gb|GG668926.1| GENE 278 290154 - 290903 1042 249 aa, chain + ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 1 249 1 249 249 291 63.0 1e-78 MGVLGVSIIMGLYYWFARLRFGYTFSGMLSQPLGAALVAGLATGKLSEAMVVGAGIQLVY LGVTSTPGGNVPSDPALASAIAIPIALGVGMNAEAAVALAVPFGVLGVFMDQLRRTINAT WVHMADKYAEELNYGGIYRAAFVYPALAGFLIRFPLVFAANFFGQSVVNKVLEVIPAWLM HGFEVMGGILPALGFALTIMVIGKKNLIPYFLIGFVAVVYFGAEVMAVAILGICIAFLVR NKALSEEAA >gi|237663592|gb|GG668926.1| GENE 279 290903 - 291754 1030 283 aa, chain + ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 9 283 13 286 286 321 62.0 1e-87 MEQMTQANEQQLEQKKITKKELSKAFWIYQLGCELSNSYERLQSLVFCASMIPAIKKLYA DDEEQQREALKRHLNFFNTEGTVGASIQGIAIAMEEEKSNGAAISDTAITSIKTGLMGPL AGIGDSIIWAALMPLIISIFIPMAKGGNVIGSIGPLVLYTAITLYISWTLVNKSYTLGRN SILSLLKDGKIKQVIYSANVLGMMMMGALSASYVKIASPMTFKVTGGATIVLQDILDQIM KGLLPLAAVMAIYFFMVKKGPRYGIIIGTIVLVSLVTSFFGLL Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:03:30 2011 Seq name: gi|237663591|gb|GG668927.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD6, whole genome shotgun sequence Length of sequence - 166681 bp Number of predicted genes - 168, with homology - 162 Number of transcription units - 79, operones - 48 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 21 - 497 396 ## gi|227517808|ref|ZP_03947857.1| hypothetical protein HMPREF0348_0791 2 1 Op 2 . - CDS 519 - 1163 492 ## gi|227517809|ref|ZP_03947858.1| hypothetical protein HMPREF0348_0792 - Prom 1217 - 1276 15.3 - Term 1453 - 1506 11.2 3 2 Op 1 1/0.048 - CDS 1515 - 2666 1351 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 4 2 Op 2 16/0.000 - CDS 2682 - 3404 634 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 5 2 Op 3 . - CDS 3397 - 4860 1603 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 4942 - 5001 8.9 + Prom 4833 - 4892 7.9 6 3 Tu 1 . + CDS 5049 - 6137 1174 ## COG0371 Glycerol dehydrogenase and related enzymes + Term 6146 - 6196 7.0 + Prom 6205 - 6264 6.3 7 4 Op 1 15/0.000 + CDS 6296 - 7441 1225 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase + Prom 7444 - 7503 3.7 8 4 Op 2 . + CDS 7523 - 7900 562 ## COG1862 Preprotein translocase subunit YajC + Term 8040 - 8094 2.1 + Prom 8070 - 8129 8.4 9 5 Op 1 . + CDS 8180 - 8467 297 ## EF0899 hypothetical protein + Prom 8513 - 8572 7.7 10 5 Op 2 6/0.048 + CDS 8623 - 11043 2693 ## COG1012 NAD-dependent aldehyde dehydrogenases + Prom 11123 - 11182 80.4 11 6 Tu 1 . + CDS 11231 - 11389 242 ## COG1454 Alcohol dehydrogenase, class IV + Term 11401 - 11449 14.7 - Term 11393 - 11432 9.3 12 7 Op 1 3/0.048 - CDS 11434 - 12477 1199 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 13 7 Op 2 5/0.048 - CDS 12461 - 13567 1163 ## COG1577 Mevalonate kinase 14 7 Op 3 5/0.048 - CDS 13570 - 14565 1124 ## COG3407 Mevalonate pyrophosphate decarboxylase 15 7 Op 4 . - CDS 14565 - 15509 841 ## COG1577 Mevalonate kinase - Prom 15652 - 15711 5.7 - Term 15608 - 15642 -0.3 16 8 Op 1 . - CDS 15779 - 16414 456 ## COG1357 Uncharacterized low-complexity proteins 17 8 Op 2 . - CDS 16411 - 17484 1036 ## COG1289 Predicted membrane protein - Prom 17590 - 17649 7.5 + Prom 17628 - 17687 9.4 18 9 Tu 1 . + CDS 17728 - 19398 2008 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 19429 - 19473 1.3 - Term 19415 - 19463 3.0 19 10 Tu 1 . - CDS 19477 - 19827 305 ## EF0908 hypothetical protein - Prom 19860 - 19919 6.1 + Prom 19754 - 19813 4.0 20 11 Op 1 49/0.000 + CDS 19918 - 20859 244 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 21 11 Op 2 44/0.000 + CDS 20859 - 21911 1054 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 22 11 Op 3 44/0.000 + CDS 21927 - 22979 1386 ## COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 23 11 Op 4 . + CDS 22979 - 23935 1191 ## COG4608 ABC-type oligopeptide transport system, ATPase component 24 11 Op 5 . + CDS 23976 - 25046 777 ## COG0675 Transposase and inactivated derivatives + Term 25267 - 25300 0.8 + Prom 25194 - 25253 10.2 25 12 Op 1 36/0.000 + CDS 25445 - 25966 426 ## PROTEIN SUPPORTED gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 + Term 26017 - 26050 -0.9 + Prom 25987 - 26046 1.6 26 12 Op 2 46/0.000 + CDS 26080 - 26280 340 ## PROTEIN SUPPORTED gi|29375499|ref|NP_814653.1| 50S ribosomal protein L35 27 12 Op 3 . + CDS 26341 - 26700 595 ## PROTEIN SUPPORTED gi|29375500|ref|NP_814654.1| 50S ribosomal protein L20 + Term 26718 - 26753 7.1 - Term 26665 - 26718 3.2 28 13 Op 1 . - CDS 26746 - 26886 69 ## EF0917 hypothetical protein 29 13 Op 2 . - CDS 26920 - 27096 195 ## EF0917 hypothetical protein - Prom 27258 - 27317 4.8 + Prom 27108 - 27167 4.0 30 14 Tu 1 . + CDS 27194 - 27553 525 ## COG3759 Predicted membrane protein + Term 27573 - 27630 4.8 + Prom 27600 - 27659 9.2 31 15 Op 1 . + CDS 27681 - 28115 593 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 32 15 Op 2 . + CDS 28133 - 28648 195 ## PROTEIN SUPPORTED gi|148360238|ref|YP_001251445.1| nucleotidyltransferase PLUS glutamate rich protein GrpB PLUS ribosomal protein alanine acetyltransferase - Term 28412 - 28461 2.2 33 16 Tu 1 . - CDS 28664 - 29839 1153 ## COG0659 Sulfate permease and related transporters (MFS superfamily) - Prom 29938 - 29997 80.4 - Term 30101 - 30134 4.0 34 17 Tu 1 . - CDS 30142 - 31170 995 ## COG2855 Predicted membrane protein - Prom 31196 - 31255 6.8 + Prom 31195 - 31254 8.2 35 18 Op 1 2/0.048 + CDS 31313 - 32113 517 ## COG0583 Transcriptional regulator 36 18 Op 2 . + CDS 32178 - 33050 965 ## COG3865 Uncharacterized protein conserved in bacteria 37 18 Op 3 . + CDS 33133 - 33255 58 ## 38 18 Op 4 . + CDS 33326 - 33550 296 ## EF0925 hypothetical protein + Prom 33552 - 33611 3.0 39 19 Op 1 40/0.000 + CDS 33639 - 34313 746 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 40 19 Op 2 . + CDS 34327 - 35352 934 ## COG0642 Signal transduction histidine kinase + Term 35359 - 35402 0.5 + Prom 35371 - 35430 7.7 41 20 Op 1 . + CDS 35500 - 36363 1042 ## COG4975 Putative glucose uptake permease 42 20 Op 2 2/0.048 + CDS 36404 - 37795 1424 ## COG0531 Amino acid transporters + Term 37804 - 37864 13.2 + Prom 37875 - 37934 5.2 43 21 Op 1 . + CDS 37983 - 39992 2348 ## COG0143 Methionyl-tRNA synthetase + Term 40001 - 40058 16.0 + Prom 40006 - 40065 5.1 44 21 Op 2 . + CDS 40092 - 40313 127 ## gi|227517851|ref|ZP_03947900.1| hypothetical protein HMPREF0348_0834 + Term 40324 - 40380 14.3 - Term 40317 - 40361 6.6 45 22 Tu 1 . - CDS 40371 - 40976 541 ## EF0932 hypothetical protein - Prom 41020 - 41079 3.6 46 23 Tu 1 . - CDS 41097 - 43295 2323 ## COG3973 Superfamily I DNA and RNA helicases - Prom 43321 - 43380 5.0 + Prom 43296 - 43355 4.3 47 24 Op 1 3/0.048 + CDS 43454 - 44224 951 ## COG0084 Mg-dependent DNase 48 24 Op 2 7/0.048 + CDS 44233 - 44805 796 ## COG1658 Small primase-like proteins (Toprim domain) 49 24 Op 3 . + CDS 44824 - 45711 915 ## COG0030 Dimethyladenosine transferase (rRNA methylation) + Term 45716 - 45765 13.1 + Prom 45740 - 45799 4.8 50 25 Tu 1 . + CDS 45838 - 46455 704 ## EF0937 hypothetical protein + Term 46466 - 46511 14.0 - Term 46454 - 46498 14.6 51 26 Tu 1 . - CDS 46506 - 47609 1524 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 47641 - 47700 5.8 + Prom 47523 - 47582 7.6 52 27 Op 1 . + CDS 47795 - 48217 550 ## COG1803 Methylglyoxal synthase + Prom 48231 - 48290 6.8 53 27 Op 2 . + CDS 48491 - 49030 540 ## EF0940 hypothetical protein + Term 49045 - 49089 7.6 - Term 49033 - 49077 7.6 54 28 Op 1 35/0.000 - CDS 49082 - 50848 213 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 55 28 Op 2 . - CDS 50838 - 52565 182 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 52705 - 52764 9.2 + Prom 52601 - 52660 4.6 56 29 Tu 1 . + CDS 52691 - 53458 562 ## COG4905 Predicted membrane protein + Prom 53622 - 53681 8.5 57 30 Op 1 . + CDS 53719 - 54927 1367 ## COG3584 Uncharacterized protein conserved in bacteria + Prom 54929 - 54988 6.4 58 30 Op 2 . + CDS 55024 - 55587 875 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 55618 - 55687 30.7 - Term 55585 - 55652 30.2 59 31 Op 1 . - CDS 55676 - 56200 463 ## COG4894 Uncharacterized conserved protein 60 31 Op 2 . - CDS 56252 - 57121 973 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 57307 - 57366 6.4 + Prom 57176 - 57235 3.8 61 32 Tu 1 . + CDS 57255 - 57935 799 ## COG0692 Uracil DNA glycosylase + Prom 58005 - 58064 5.1 62 33 Tu 1 . + CDS 58091 - 59074 1226 ## COG0280 Phosphotransacetylase + Prom 60560 - 60619 80.4 63 34 Op 1 3/0.048 + CDS 60772 - 61251 583 ## COG0802 Predicted ATPase or kinase 64 34 Op 2 . + CDS 61244 - 61765 215 ## PROTEIN SUPPORTED gi|229236145|ref|ZP_04360568.1| acetyltransferase, ribosomal protein N-acetylase + Term 61799 - 61857 11.3 + Prom 61828 - 61887 12.4 65 35 Tu 1 . + CDS 61935 - 62144 307 ## EF0953 hypothetical protein + Term 62177 - 62229 16.7 - Term 62169 - 62213 12.4 66 36 Op 1 1/0.048 - CDS 62218 - 63228 932 ## COG1609 Transcriptional regulators 67 36 Op 2 . - CDS 63252 - 64259 320 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase 68 36 Op 3 11/0.048 - CDS 64249 - 64917 676 ## COG0637 Predicted phosphatase/phosphohexomutase 69 36 Op 4 . - CDS 64910 - 67204 2148 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) - Prom 67232 - 67291 7.8 + Prom 67346 - 67405 5.4 70 37 Op 1 1/0.048 + CDS 67485 - 69653 2591 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 71 37 Op 2 . + CDS 69719 - 70543 896 ## COG3568 Metal-dependent hydrolase + Term 70544 - 70585 10.6 - Term 70529 - 70576 14.5 72 38 Tu 1 . - CDS 70603 - 71418 1094 ## COG0345 Pyrroline-5-carboxylate reductase - Prom 71466 - 71525 5.9 + Prom 71286 - 71345 7.2 73 39 Op 1 . + CDS 71545 - 72507 675 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 74 39 Op 2 . + CDS 72488 - 72787 369 ## EF0963 hypothetical protein 75 39 Op 3 . + CDS 72804 - 73094 368 ## COG1694 Predicted pyrophosphatase + Term 73127 - 73185 4.1 76 40 Op 1 . - CDS 73254 - 73967 336 ## EF0965 hypothetical protein 77 40 Op 2 . - CDS 73972 - 74604 482 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 78 40 Op 3 . - CDS 74615 - 74764 100 ## gi|257086304|ref|ZP_05580665.1| conserved hypothetical protein 79 40 Op 4 . - CDS 74770 - 74979 58 ## gi|227517887|ref|ZP_03947936.1| conserved hypothetical protein 80 41 Op 1 . - CDS 75350 - 76297 367 ## COG0535 Predicted Fe-S oxidoreductases - Prom 76318 - 76377 2.8 - Term 76322 - 76364 10.4 81 41 Op 2 . - CDS 76393 - 76512 211 ## - Prom 76634 - 76693 14.0 + Prom 76619 - 76678 9.6 82 42 Op 1 . + CDS 76905 - 77681 732 ## COG0789 Predicted transcriptional regulators + Term 77718 - 77771 13.2 + Prom 77774 - 77833 5.8 83 42 Op 2 . + CDS 77923 - 79815 1041 ## COG1512 Beta-propeller domains of methanol dehydrogenase type + Term 79850 - 79905 17.7 - TRNA 79903 - 79976 76.2 # Arg TCT 0 0 + Prom 80073 - 80132 6.3 84 43 Op 1 14/0.000 + CDS 80244 - 80552 518 ## PROTEIN SUPPORTED gi|29375551|ref|NP_814705.1| 50S ribosomal protein L21 85 43 Op 2 14/0.000 + CDS 80585 - 80929 564 ## PROTEIN SUPPORTED gi|29375552|ref|NP_814706.1| hypothetical protein EF0969 86 43 Op 3 . + CDS 80942 - 81229 485 ## PROTEIN SUPPORTED gi|29375553|ref|NP_814707.1| 50S ribosomal protein L27 + Term 81232 - 81282 10.1 + Prom 81376 - 81435 8.1 87 44 Tu 1 . + CDS 81466 - 81879 429 ## COG3223 Predicted membrane protein + Term 81895 - 81948 7.2 - Term 81882 - 81935 4.2 88 45 Tu 1 . - CDS 81950 - 82765 671 ## COG1408 Predicted phosphohydrolases - Prom 82785 - 82844 6.3 + Prom 82668 - 82727 7.2 89 46 Op 1 1/0.048 + CDS 82937 - 84001 1584 ## COG0006 Xaa-Pro aminopeptidase 90 46 Op 2 . + CDS 84015 - 84335 500 ## COG1694 Predicted pyrophosphatase + Term 84347 - 84391 5.1 + Prom 84505 - 84564 4.2 91 47 Op 1 10/0.048 + CDS 84668 - 85099 704 ## COG1302 Uncharacterized protein conserved in bacteria 92 47 Op 2 4/0.048 + CDS 85092 - 85544 658 ## COG0781 Transcription termination factor + Prom 85551 - 85610 6.0 93 48 Op 1 7/0.048 + CDS 85648 - 86493 1161 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 94 48 Op 2 . + CDS 86503 - 87849 1415 ## COG1570 Exonuclease VII, large subunit 95 48 Op 3 . + CDS 87851 - 88081 471 ## EF0980 exodeoxyribonuclease VII, small subunit 96 48 Op 4 3/0.048 + CDS 88081 - 88962 1117 ## COG0142 Geranylgeranyl pyrophosphate synthase 97 48 Op 5 6/0.048 + CDS 88976 - 89791 877 ## COG1189 Predicted rRNA methylase + Prom 89822 - 89881 10.9 98 49 Op 1 8/0.048 + CDS 89930 - 90379 469 ## COG1438 Arginine repressor 99 49 Op 2 . + CDS 90397 - 92070 1859 ## COG0497 ATPase involved in DNA repair + Term 92088 - 92145 18.1 - Term 92083 - 92124 7.0 100 50 Op 1 . - CDS 92161 - 92271 158 ## 101 50 Op 2 . - CDS 92339 - 93295 872 ## COG0598 Mg2+ and Co2+ transporters - Prom 93327 - 93386 7.5 102 51 Op 1 . + CDS 93570 - 93941 203 ## EF0987 putative lipoprotein 103 51 Op 2 . + CDS 93973 - 94038 109 ## + Prom 94091 - 94150 5.4 104 52 Op 1 29/0.000 + CDS 94178 - 94660 483 ## COG2001 Uncharacterized protein conserved in bacteria 105 52 Op 2 . + CDS 94675 - 95631 1015 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 106 52 Op 3 . + CDS 95648 - 96055 524 ## EF0990 cell division protein 107 52 Op 4 4/0.048 + CDS 96055 - 98283 2406 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 108 52 Op 5 28/0.000 + CDS 98310 - 99275 987 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 109 52 Op 6 4/0.048 + CDS 99298 - 100668 1341 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 110 52 Op 7 3/0.048 + CDS 100673 - 101764 1232 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 111 52 Op 8 25/0.000 + CDS 101773 - 102897 960 ## COG1589 Cell division septal protein + Term 103013 - 103050 0.1 + Prom 102926 - 102985 5.7 112 52 Op 9 35/0.000 + CDS 103071 - 104393 1478 ## COG0849 Actin-like ATPase involved in cell division 113 52 Op 10 4/0.048 + CDS 104420 - 105652 1623 ## COG0206 Cell division GTPase 114 52 Op 11 14/0.000 + CDS 105669 - 106346 555 ## COG0325 Predicted enzyme with a TIM-barrel fold 115 52 Op 12 . + CDS 106360 - 107004 707 ## COG1799 Uncharacterized protein conserved in bacteria 116 52 Op 13 . + CDS 107081 - 107290 144 ## EF1000 hypothetical protein 117 52 Op 14 . + CDS 107317 - 108099 1342 ## PROTEIN SUPPORTED gi|29375583|ref|NP_814737.1| S4 domain-containing protein 118 52 Op 15 . + CDS 108110 - 108199 60 ## 119 52 Op 16 6/0.048 + CDS 108251 - 108952 895 ## COG3599 Cell division initiation protein + Term 109145 - 109187 9.0 + Prom 109164 - 109223 4.8 120 53 Tu 1 . + CDS 109263 - 110852 1982 ## COG0060 Isoleucyl-tRNA synthetase + Prom 110996 - 111055 80.4 121 54 Tu 1 . + CDS 111083 - 112297 1381 ## COG0060 Isoleucyl-tRNA synthetase + Term 112302 - 112356 11.1 - Term 112289 - 112344 9.1 122 55 Op 1 . - CDS 112349 - 113872 1612 ## COG0364 Glucose-6-phosphate 1-dehydrogenase 123 55 Op 2 . - CDS 113872 - 114540 857 ## COG1321 Mn-dependent transcriptional regulator - Prom 114567 - 114626 5.2 - Term 114652 - 114711 10.2 124 56 Tu 1 . - CDS 114712 - 115080 304 ## EF1006 hypothetical protein - Prom 115122 - 115181 4.0 + Prom 115179 - 115238 8.1 125 57 Tu 1 . + CDS 115279 - 116010 717 ## COG1489 DNA-binding protein, stimulates sugar fermentation + Term 116049 - 116083 -0.7 + Prom 116025 - 116084 6.0 126 58 Op 1 1/0.048 + CDS 116116 - 117114 1342 ## COG0673 Predicted dehydrogenases and related proteins 127 58 Op 2 1/0.048 + CDS 117141 - 118442 1291 ## COG0513 Superfamily II DNA and RNA helicases 128 58 Op 3 . + CDS 118487 - 121192 2647 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain + Term 121205 - 121254 5.4 + Prom 121798 - 121857 7.1 129 59 Op 1 . + CDS 121880 - 123343 1722 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 130 59 Op 2 . + CDS 123387 - 123605 383 ## EF1014 hypothetical protein 131 59 Op 3 . + CDS 123625 - 123819 190 ## EF1015 hypothetical protein 132 59 Op 4 . + CDS 123819 - 124229 391 ## EF1016 hypothetical protein + Term 124232 - 124265 -0.2 133 60 Op 1 13/0.048 + CDS 124854 - 125174 465 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 134 60 Op 2 8/0.048 + CDS 125240 - 126517 1504 ## COG1455 Phosphotransferase system cellobiose-specific component IIC + Term 126524 - 126579 10.5 + Prom 126522 - 126581 2.6 135 61 Op 1 . + CDS 126601 - 127995 1724 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 136 61 Op 2 . + CDS 128053 - 129246 1262 ## COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases + Prom 129248 - 129307 6.2 137 61 Op 3 . + CDS 129329 - 129448 174 ## + Term 129475 - 129532 17.0 + TRNA 129567 - 129640 75.1 # Arg CCT 0 0 + Prom 129565 - 129624 76.3 138 62 Tu 1 . + CDS 129674 - 130006 560 ## PROTEIN SUPPORTED gi|29375603|ref|NP_814757.1| hypothetical protein EF1023 + Term 130037 - 130091 16.2 - Term 130023 - 130077 16.2 139 63 Tu 1 . - CDS 130120 - 132765 2685 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase - Prom 132880 - 132939 6.4 + Prom 132836 - 132895 10.8 140 64 Op 1 4/0.048 + CDS 132935 - 133564 704 ## COG0517 FOG: CBS domain 141 64 Op 2 . + CDS 133577 - 134389 981 ## COG1806 Uncharacterized protein conserved in bacteria + Term 134393 - 134445 11.0 - Term 134374 - 134439 24.3 142 65 Op 1 . - CDS 134460 - 136991 2479 ## COG2898 Uncharacterized conserved protein 143 65 Op 2 . - CDS 136988 - 137722 587 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 137759 - 137818 8.0 + Prom 137696 - 137755 6.1 144 66 Op 1 . + CDS 137899 - 138483 514 ## EF1029 hypothetical protein 145 66 Op 2 . + CDS 138506 - 139561 981 ## EF1030 endonuclease/exonuclease/phosphatase family protein 146 66 Op 3 . + CDS 139578 - 140045 395 ## COG0775 Nucleoside phosphorylase 147 66 Op 4 . + CDS 140061 - 140234 68 ## EF1031 phosphorylase family protein + Term 140328 - 140382 -0.6 - Term 140232 - 140282 15.1 148 67 Tu 1 . - CDS 140338 - 142575 1394 ## COG0178 Excinuclease ATPase subunit - Prom 142595 - 142654 7.3 + Prom 142546 - 142605 6.5 149 68 Tu 1 . + CDS 142737 - 144614 2046 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases + Term 144751 - 144792 0.2 + Prom 144616 - 144675 80.3 150 69 Op 1 . + CDS 144842 - 144985 144 ## EF1033 6-aminohexanoate-cyclic-dimer hydrolase, putative + Term 144991 - 145043 9.6 + Prom 144994 - 145053 7.0 151 69 Op 2 . + CDS 145077 - 146006 779 ## COG3173 Predicted aminoglycoside phosphotransferase 152 69 Op 3 . + CDS 146049 - 146702 759 ## EF1035 putative lipoprotein + Prom 146716 - 146775 3.4 153 69 Op 4 . + CDS 146824 - 147225 555 ## COG0105 Nucleoside diphosphate kinase + Term 147229 - 147290 17.0 + Prom 147240 - 147299 9.8 154 70 Op 1 . + CDS 147385 - 148995 1583 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 149000 - 149046 12.1 + Prom 149027 - 149086 3.4 155 70 Op 2 . + CDS 149137 - 150222 1085 ## EF1038 putative lipoprotein + Term 150234 - 150280 15.2 - Term 150217 - 150271 17.3 156 71 Tu 1 . - CDS 150338 - 151141 977 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 151229 - 151288 8.1 + Prom 151205 - 151264 3.1 157 72 Op 1 . + CDS 151293 - 151922 463 ## COG4330 Predicted membrane protein + Prom 151929 - 151988 12.4 158 72 Op 2 . + CDS 152074 - 153480 1638 ## COG2252 Permeases + Term 153569 - 153618 14.0 + Prom 153604 - 153663 7.5 159 73 Tu 1 . + CDS 153690 - 154886 927 ## COG0477 Permeases of the major facilitator superfamily + Term 154898 - 154953 3.1 - Term 154889 - 154940 10.5 160 74 Tu 1 . - CDS 154941 - 155126 260 ## EF1043 hypothetical protein + Prom 154986 - 155045 4.8 161 75 Tu 1 . + CDS 155244 - 158573 3066 ## COG0587 DNA polymerase III, alpha subunit + Prom 158604 - 158663 6.7 162 76 Op 1 12/0.048 + CDS 158746 - 159708 1345 ## COG0205 6-phosphofructokinase 163 76 Op 2 . + CDS 159773 - 161530 2276 ## COG0469 Pyruvate kinase + Term 161582 - 161627 8.3 + Prom 161824 - 161883 8.2 164 77 Op 1 20/0.000 + CDS 161904 - 162473 609 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein 165 77 Op 2 . + CDS 162530 - 162709 322 ## PROTEIN SUPPORTED gi|29375627|ref|NP_814781.1| 50S ribosomal protein L32 + Term 162734 - 162784 12.2 + Prom 162799 - 162858 7.5 166 78 Tu 1 . + CDS 162914 - 164335 1807 ## COG0362 6-phosphogluconate dehydrogenase + Term 164346 - 164389 9.2 + Prom 164375 - 164434 3.4 167 79 Op 1 40/0.000 + CDS 164493 - 165179 872 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 168 79 Op 2 . + CDS 165190 - 166681 1241 ## COG0642 Signal transduction histidine kinase Predicted protein(s) >gi|237663591|gb|GG668927.1| GENE 1 21 - 497 396 158 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227517808|ref|ZP_03947857.1| ## NR: gi|227517808|ref|ZP_03947857.1| hypothetical protein HMPREF0348_0791 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0791 [Enterococcus faecalis TX0104] hypothetical protein [Enterococcus sp. 7L76] # 1 158 1 158 158 251 100.0 2e-65 MKIKHSFFKATTVPLLLGTLFISSSLLTKAALAEDTTTTATISEATEPIVTTETERTSPS VNEENPTIKAALEDAKKSPECWLPIFEEENFTEATTILVMPEGAFISGQIELGTGESWDS DTDPNATTLGELLTALDEHDLNPYGEKGTSPFKNSIHS >gi|237663591|gb|GG668927.1| GENE 2 519 - 1163 492 214 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227517809|ref|ZP_03947858.1| ## NR: gi|227517809|ref|ZP_03947858.1| hypothetical protein HMPREF0348_0792 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0792 [Enterococcus faecalis TX0104] # 12 214 1 203 203 380 99.0 1e-104 MLSTSSLFFSLLVVVGFTEHANAADFIPGKIVESEEFDDSERVVVLPDGAAISGGIFEID DPNLFPEPVVIDTETSPLAITTNEYKKMVEAKPLINRADLVRRGSPAPTTAAGTYTVPNN GLYRSNYFSGRGWRFAGYNFRPASGTGAYLRWQTYNESALVGTTRNARDTYNTGTGFGTI MTPGYSMYFTGPGNLTTYYSFNPAPNSYYIVRNW >gi|237663591|gb|GG668927.1| GENE 3 1515 - 2666 1351 383 aa, chain - ## HITS:1 COG:lin2354 KEGG:ns NR:ns ## COG: lin2354 COG0436 # Protein_GI_number: 16801417 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Listeria innocua # 1 383 2 383 383 489 63.0 1e-138 MDRKNIATRYQQPTENLLMDIATLAKKTPNLIDLSIGDPDLITDERIIEQAANDAKNGHT KYTASDGSEAFIEAVIQFYQSHYQLSFQPNQVRATVGALHGMYLALQVILNPGDEVIIHE PYFSPYKDQVLLADGVPVFLPTYEEDGFQIDVALLKEKITPKTKAIILNSPNNPTGAVFS EETFREIAQVAIEHNLYILSDEVYEAFCFQETFTPMATFAPKNTITFGSFSKAFAMTGWR IGYMIAPDYINEVAKLINEGVTYSAPTLSQQAGIYALQHFDEFVDPIVEVFQTRLEYVAQ RVAKIPFLSLHPVKGSIYAFINIQKTGLTSVPFVEKLLKETQVLVIPGKAFGETTGDEYI RLAATQNLDLLKEAFDRIERMTF >gi|237663591|gb|GG668927.1| GENE 4 2682 - 3404 634 240 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 248 52 1e-64 MINIKNLQKTFGKNEVLKGIDLEIEAGEVVVIIGPSGSGKSTFLRCLNLLETPTGGSVEF EGKNLLDKNTNIDQLRQKMGMVFQNFNLFPHKNVLENLTISPVKVKKEAAAEATEHALSL LEQVGLSDKKENYPAQLSGGQQQRVAIARALAMRPDVMLFDEPTSALDPEMVGEVLSVMK NLAIEGMTMVVVTHEMGFAKEVADRVIFMDAGIIQEEGTPEEIFDAPQNPRTQDFLRKVL >gi|237663591|gb|GG668927.1| GENE 5 3397 - 4860 1603 487 aa, chain - ## HITS:1 COG:lin2352_1 KEGG:ns NR:ns ## COG: lin2352_1 COG0834 # Protein_GI_number: 16801415 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Listeria innocua # 5 271 3 271 271 312 62.0 8e-85 MTKCKKWLQTILPILFLLLSLLPIKETFAAENDPVYDKIIQKGELVVGLSADYAPYEFHA KVDGEDKIVGFDISIAQKIADDLGVKLKIEELGFDALLGALKTGKIDMVISGMSPTPERL KEVAFSQPYMNVQQRVIVRKEDKDKFHSTKDFEGVRAGAQKQTTQEELIKTELTGAVPTS LQKIPDLIMNLKNNKLDAVVMEEPVGEAYVSQNEDLAFADVTFEKGSKDTAVAFPKDAPV LTEKVNASIKQINDQKLMDGYKKEANQLMFQKDQSFLQKYGKFYLNGAGYTIFLAFIGVL FGAILGALLALMKLANSKILRGIAIAYIEYVRGTPLLVQIFIVYFGTGVLGLDLSKVAAG CIALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGN EFVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTISRLLGVAE RRMSTSD >gi|237663591|gb|GG668927.1| GENE 6 5049 - 6137 1174 362 aa, chain + ## HITS:1 COG:lin1848 KEGG:ns NR:ns ## COG: lin1848 COG0371 # Protein_GI_number: 16800915 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Listeria innocua # 1 362 2 364 368 399 53.0 1e-111 MEQSLIVRGTPQEYLCEIGSWELLEGQLLCRNIHRVFILHGTESWQAAKPYFPTFQKVTA VFENYGGVCTDQRVQELEAQVLDNHLEAIVAVGGGKVADLGKALAHKMALPVIILPTLAA TCAPCTPLSVMYREDGAMERYDVFPQANALVLVEPRVLLHSPRSLMVAGIGDTLAKWYEA DAIISQLDVQVLPIQVSHFAAEKCRDILLNESINALKAMEEQQLNQSFIDVIETNLIIGG MVGGFGDDYGRTAGAHSIHDALTLLPASHQQLHGNKVAYGVFVQLAIEEKWQEIAELIPF YHQLGLPISLKEMDMDLTEAEYQEVAERACIEGETIHYMKQKITPEIVKTAMQDLEKYTA TK >gi|237663591|gb|GG668927.1| GENE 7 6296 - 7441 1225 381 aa, chain + ## HITS:1 COG:SP2058 KEGG:ns NR:ns ## COG: SP2058 COG0343 # Protein_GI_number: 15901878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 376 1 376 380 682 83.0 0 MTEPAIRYRLIKKDKHTGARLGELITPHGTFPTPMFMPVGTLATVKTMSPEELKEMGAGV ILSNTYHLWLRPGEDLVEEAGGLHKFMNWDQPILTDSGGFQVFSLSDMRKIEEEGVHFRN HLNGSKMFLSPEKAINIQNKLGSDIMMSFDECPPFDESYEYVKRSIERTSRWAERGLKAH ANPDRQGLFGIVQGAGFEDLRRQSAKDLVSMDFPGYSIGGLSVGESKEEMNRVLDFTTPL IPENKPRYLMGVGAPDSLIDGVIRGIDMFDCVLPTRIARNGTCMTSQGRLVVKNAQYARD FRPLDEKCDCYVCRNYTRAYIRHLIKCDETFGIRLTSYHNLYFLLDLMKNVRQAIMDDNL LEFRQAFFEEYGFNKANAKSF >gi|237663591|gb|GG668927.1| GENE 8 7523 - 7900 562 125 aa, chain + ## HITS:1 COG:L184708 KEGG:ns NR:ns ## COG: L184708 COG1862 # Protein_GI_number: 15674113 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Lactococcus lactis # 4 114 3 106 110 76 52.0 1e-14 MGGGFTMIFTLVLLGGMMFFMTRSQKKQQQERQKQLNAMKTGDSVVTIGGLHGVLSEINE KTVLIDCEGIVLEFDRAAIRTVTPGTAVTNDSAVTSVPVTEVEETVTEEVTEVPETSDPS KEKKD >gi|237663591|gb|GG668927.1| GENE 9 8180 - 8467 297 95 aa, chain + ## HITS:1 COG:no KEGG:EF0899 NR:ns ## KEGG: EF0899 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 95 1 95 95 155 97.0 4e-37 MTKEKLSWLQQKMLNKSIKKKCQNFRELGYSSINEEDLLTYLLTYRWKKQTHLSVKDCRK DIQKVKPNEFFDYQQLLAQTSKKPLRDWHDIEDLF >gi|237663591|gb|GG668927.1| GENE 10 8623 - 11043 2693 806 aa, chain + ## HITS:1 COG:lin1675_1 KEGG:ns NR:ns ## COG: lin1675_1 COG1012 # Protein_GI_number: 16800743 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Listeria innocua # 11 456 10 455 455 637 70.0 0 MVKTVKKEKTETVDVSSMIDELATKANVALKAMEDFTQEQVDHIVHQMAMAALDQHMPLA KMAVEETGRGIYEDKAIKNMYASEYIWNNIKHDKTVGVINKDEQTGLMEIAEPVGVVCGV TPTTNPTSTTIFKSLIALKTRNPIVFAFHPSAQKCSAEAARIVRDAAIAAGAPENCIQWI EQPSIDATSALMNHPGIAIVLATGGAGMVKSAYSTGKPALGVGPGNVPAYIEKTAKVKRA VNDLIVSKSFDNGMICASEQAVIVDKEIYASVKAEFEAHNVYFVKPNELQKLEDAVMNEG KYAVNPAIVGNSAEKIAELAGISVPKGTKILVAELEGAGPEYPLSREKLSPVLAMMKSNN AEHAFELCEAMLNLGGLGHTAVIHTEDEELQVAFGLRMKACRILVNTPSAEGGIGNIYNE MIPSLTLGCGSYGKNSVSKNVSAINLINIKTVAKRRNNMQWFKLPPKIFFEKNSLQYLQK MENVERVMLVCDPGMVQFGYADIVRKELQKRKNDVKIEVFSDVEPNPSTNTVYAGTKMMV DFQPDTVIALGGGSAMDAAKGMWMFYEHPDTEFFGAKQKFLDIRKRTYKIAKPEKTQFVC IPTTSGTGSEVTPFAVITDSETHVKYPLADYALTPDVAIVDPQFVMSVPASVTADTGMDV LTHAIESYVSVMASDYTRGLSLQAIKLVFDHLENSVKRPDMESREKMHNASTMAGMAFAN AFLGICHSIAHKIGGEYGIPHGRTNAILLPHIIRYNAKDPSKHAMFPKYDYFRADTDYAD IAKFLGLKGNTTAELVEALATAVAAS >gi|237663591|gb|GG668927.1| GENE 11 11231 - 11389 242 52 aa, chain + ## HITS:1 COG:SA0143_2 KEGG:ns NR:ns ## COG: SA0143_2 COG1454 # Protein_GI_number: 15925852 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Staphylococcus aureus N315 # 1 50 358 407 411 76 72.0 1e-14 MNLKAQGVSQETLDTTVDRMAELAYEDQCTTANPKEPLISELKQIILDAYVG >gi|237663591|gb|GG668927.1| GENE 12 11434 - 12477 1199 347 aa, chain - ## HITS:1 COG:SA2136 KEGG:ns NR:ns ## COG: SA2136 COG1304 # Protein_GI_number: 15927926 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Staphylococcus aureus N315 # 3 340 9 345 349 317 45.0 2e-86 MNRKDEHLSLAKAFHKEKSNDFDRVRFVHQSFAESAVNEVDISTSFLSFQLPQPFYVNAM TGGSQRAKEINQQLGIIGKETGLLVATGSVSAALKDASLADTYQIMRKENPDGLIFANIG AGLGVEEAKRALDLFQANALQIHVNVPQELVMPEGDRDFTNWLTKIEAIVQAVEVPVIVK EVGFGMSQETLEKLTSIGVQAADVSGQGGTSFTQIENARRKKRELSFLDDWGQSTVISLL ESQNWQKKLTILGSGGVRNSLDIVKGLALGAKSMGVAGTILASLMSKNGLENTLALVQQW QEEVKMLYTLLGKKTTEELTSTALILDPVLVNWCHNRGIDSTVFAKR >gi|237663591|gb|GG668927.1| GENE 13 12461 - 13567 1163 368 aa, chain - ## HITS:1 COG:SA0549 KEGG:ns NR:ns ## COG: SA0549 COG1577 # Protein_GI_number: 15926270 # Func_class: I Lipid transport and metabolism # Function: Mevalonate kinase # Organism: Staphylococcus aureus N315 # 1 357 1 358 358 320 44.0 4e-87 MIEVTTPGKLFIAGEYAVVEPGHPAIIVAVDQFVTVTVEETTDEGSIQSAQYSSLPIRWT RRNGELVLDIRENPFHYVLAAIHLTEKYAQEQNKELSFYHLKVTSELDSSNGRKYGLGSS GAVTVGTVKALNIFYDLGLENEEIFKLSALAHLAVQGNGSCGDIAASCYGGWIAFSTFDH DWVNQKVATETLTDLLAMDWPELMIFPLKVPKQLRLLIGWTGSPASTSDLVDRVHQSKEE KQAAYEQFLMKSRLCVETMINGFNTGKISVIQKQITKNRQLLAELSSLTGVVIETEALKN LCDLAESYTGAAKSSGAGGGDCGIVIFRQKSGILPLMTAWEKDGITPLPLHVYTYGQKEC KEKHESKR >gi|237663591|gb|GG668927.1| GENE 14 13570 - 14565 1124 331 aa, chain - ## HITS:1 COG:SA0548 KEGG:ns NR:ns ## COG: SA0548 COG3407 # Protein_GI_number: 15926269 # Func_class: I Lipid transport and metabolism # Function: Mevalonate pyrophosphate decarboxylase # Organism: Staphylococcus aureus N315 # 3 325 4 327 327 350 57.0 2e-96 MLSGKARAHTNIALIKYWGKANEEYILPMNSSLSLTLDAFYTETTVTFDAHYSEDVFILD GILQNEKQTKKVKEFLNLVRQQADCTWFAKVESQNFVPTAAGLASSASGLAALAGACNVA LGLNLSAKDLSRLARRGSGSACRSIFGGFAQWNKGHSDETSFAENIPANNWENELAMLFI LINDGEKDVSSRDGMKRTVETSSFYQGWLDNVEKDLSQVHEAIKTKDFPRLGEIIEANGL RMHGTTLGAVPPFTYWSPGSLQAMALVRQARAKGIPCYFTMDAGPNVKVLVEKKNLEALK TFLSEHFSKEQLVPAFAGPGIELFETKGMDK >gi|237663591|gb|GG668927.1| GENE 15 14565 - 15509 841 314 aa, chain - ## HITS:1 COG:lin0010 KEGG:ns NR:ns ## COG: lin0010 COG1577 # Protein_GI_number: 16799089 # Func_class: I Lipid transport and metabolism # Function: Mevalonate kinase # Organism: Listeria innocua # 9 307 4 301 322 211 42.0 2e-54 MNIKKQGLGQATGKIILMGEHAVVYGEPAIAFPFQATEITAVFTPAKTMQIDCAYFTGLL EDVPQELANIKEVVQQTLHFLKEDTVKGTLTLTSTIPAERGMGSSAATAVAIVRSLFDYF DYAYTYQELFELVSLSEKIAHGNPSGIDAAATSGADPLFFTRGFPPTHFSMNLSNAYLVV ADTGIKGQTREAVKDIAQLAQNNPTAIAETMKQLGSFTKEAKQAILQDDKQKLGQLMTLA QEQLQQLSVSNDMLDRLVALSLEHGALGAKLTGGGRGGCMIALTDNKKTAQTIAQTLEEN GAVATWIQSLEVKK >gi|237663591|gb|GG668927.1| GENE 16 15779 - 16414 456 211 aa, chain - ## HITS:1 COG:BS_yisX KEGG:ns NR:ns ## COG: BS_yisX COG1357 # Protein_GI_number: 16078153 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Bacillus subtilis # 9 210 9 211 212 114 29.0 2e-25 MKITYPLPPNLPEQLPLLTNCQLEDEAILESHLYQQIDLPNQEVRNLVFRDAVFDHLSLA NGQFASFDCSNVRFEACDFSNVEWLSGSFHRVTFLRCNLTGTNFADSYLKDCLFEDCKAD YASFRFANFNLVHFNQTRLVESEFFEVTWKKLLLEACDLTESNWLNTSLKGLDFSQNTFE RLTFSPNYLSGLKVTPEQAIYLASALGLVIT >gi|237663591|gb|GG668927.1| GENE 17 16411 - 17484 1036 357 aa, chain - ## HITS:1 COG:Cj0557c KEGG:ns NR:ns ## COG: Cj0557c COG1289 # Protein_GI_number: 15791918 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 20 329 28 337 361 113 28.0 7e-25 MKNSTFLKDLFAIDKANDELFRLVGVAICMAIPLLIGYFSNNLLIGTFGSMGIYTFIYYQ PLPLPQLLRRLNIVGFFIVLGNSLGMLSHHVPWLIPITIAIVAFFARLLFRLYGIEKPGA LLVIMSTAMGTSNNFPLHKIPIMASFVLLGVVTGIIMGIVLHFIDKRPYVFQKRMSLQER LYIDPASLLDALHYAAILFLAAYLSQSLHLVNAYWMTFTCAAILQGENLHSVMQRNVQRI LGTSLGLLLSAILLMIPFTPLQTIGIISILYAAFEGFINRNYAIASFFITPMSLLLSNLA RQQVISNLLNYRLVGIVLGSLLGFAGAYVFTTALRFYNRAYSIDETFENQQEERGVL >gi|237663591|gb|GG668927.1| GENE 18 17728 - 19398 2008 556 aa, chain + ## HITS:1 COG:lin2300 KEGG:ns NR:ns ## COG: lin2300 COG4166 # Protein_GI_number: 16801364 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Listeria innocua # 22 556 22 559 559 442 44.0 1e-124 MKLKKSLTFGVITLFSVTTLAACGGGGTSDSSSASGGGKASGEQVLRVTEQQEMPTADLS LATDRISFIALNNVYEGIYRLDKDNKVQPAGAAEKAEVSEDGLTYKIKLNKDAKWSDGKP VTANDYVYGWQRTVDPATASEYAYLYASVKNGDAIAKGEKDKSELGIKAVSDTELEITLE KATPYFDYLLAFPSFFPQRQDIVEKYGKNYASNSESAVYNGPFVLDGFDGPGTDTKWSFK KNDQYWDKDTVKLDSVDVNVVKESPTALNLFQDGQTDDVVLSGELAQQMANDPAFVSQKE ASTQYMELNQRDEKSPFRNANLRKAISYSIDRKALVESILGDGSIEPNGLVPADMAKDPS GGKDFAKEAGSQIEYDTKKAKEYWEKAKKELGISTLTMDILSSDADSSKKTVEFVQGSIQ DALDGVKVTVSPVPFSVRLDRSNKGDFDAVIGGWSADYADPSSFLDLFASDNSYNRGRYN NPEFDKFVKAASSADATDPEKRWDDMLNAEKTIMGDMGVVPLFQKSEAHLRAEKVKDVAV HPAGATYDYKWAYISE >gi|237663591|gb|GG668927.1| GENE 19 19477 - 19827 305 116 aa, chain - ## HITS:1 COG:no KEGG:EF0908 NR:ns ## KEGG: EF0908 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 116 1 116 116 169 99.0 4e-41 MKTFKWPIITAVISSIGIFLYLLISKEPITTSSLSDTFFIVSLFFLIIGIALWIMSSGFF DNFQRSMKNAFRFKKKNEPKEFIPLSVIGDAHRSFWLKTGGILLILSLGFLLFYLV >gi|237663591|gb|GG668927.1| GENE 20 19918 - 20859 244 313 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 9 303 6 310 320 98 25 2e-19 MNSFGKYFLKRIFFMIITLWLIATITFFLMQLLPGTPYTNQEKLSPETIAMLNKQSGLDK PVIVQYGIYLKNLVTGDFGISFQFKNQPVAKLLAGRIGPSLQLGGQAIIFGTLVGILLGI IAAMRQNTWVDTLATLLAILGRSIPNFVFAVLLQYIFAMKLRILPIAMWNGFAYTILPTI ALAMSPMADSARFIRTEMVEVLHSDYVELAKAKGLSRWQVAFRHGLRNSLIPLITLLGPL AVGLMTGSLVVENIFAIPGIGEQFVKSIMTNDYPTIMAVTILYSTMLVVVILIVDLLYGL IDPRIRVSGGAKG >gi|237663591|gb|GG668927.1| GENE 21 20859 - 21911 1054 350 aa, chain + ## HITS:1 COG:lin2298 KEGG:ns NR:ns ## COG: lin2298 COG1173 # Protein_GI_number: 16801362 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Listeria innocua # 16 350 6 344 344 353 55.0 3e-97 METVNKNNLPQAIKDIPADEFQPLNTSTLKERERIATPSLSFLQDSWRRLKKNKAAVISM SFLAVIIFISIITIWVSPHNPTKQNVSYINLPPRIPGLESVNGLNGKTTVAGQLVDKYAQ ANVPDNVNFYLGTDGLGRDVLSRLFMGTRISLLIAFIAAILDITIGVTYGLISGLVGGRV DTVMQRILEVLSGIPNLVVMILMLTVFDPGIVSIVLAMVITNWISMARIVRAQTMKLKDQ EFVMAAETLGESRWKIAIKHILPNISSVIIVQMMFSIPSAIFFEAFLSFIGLGLRPPTAS LGTLLNEGYKTFRFLPYLMWIPAATLSVIMICFNLLADGLRDAFDPKMKE >gi|237663591|gb|GG668927.1| GENE 22 21927 - 22979 1386 350 aa, chain + ## HITS:1 COG:lin2297 KEGG:ns NR:ns ## COG: lin2297 COG0444 # Protein_GI_number: 16801361 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component # Organism: Listeria innocua # 1 341 1 342 358 499 72.0 1e-141 MEKVLEVKDLRISFDTFAGKVNAIRGVSFDLYKGETLAIVGESGSGKSVTTRSIMRLLSS NANIDNGEILFKGQDIVHKTEKQMQAIRGKEIAMIFQDPMTSLDPTMPIGKQVAESLIKH NKVSKKEGLAQALELLKLVGIPNAEKRLKNYPHQFSGGQRQRIVIAIALICYPEVLIADE PTTALDVTIQAQILELLKDLQEKISTSIIFITHDLGVVANVADRVAVMYGGRLVEVGTAE EIFYNPQHPYTWGLLGSMPTMEGTEDKLYAIPGSPPDLLDPPTGDAFYPRNEFALKIDTE KEPPYFEVSPTHKAATWLLAPQAPKVTPPAEIVRRWAIYAERQKNPGGSN >gi|237663591|gb|GG668927.1| GENE 23 22979 - 23935 1191 318 aa, chain + ## HITS:1 COG:lin2296 KEGG:ns NR:ns ## COG: lin2296 COG4608 # Protein_GI_number: 16801360 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, ATPase component # Organism: Listeria innocua # 1 308 1 311 322 429 68.0 1e-120 MAEEKKVLLEVTGLKQYFNVGRKDEVKAIDDISFHIYEGETFGLVGESGSGKSTTGRSVI RLYDPTAGEILFDGKDISKIKSKADMQAFRRDVQMIFQDPYASLNPRMKVNDIIAEGIDV NGLAKTPKEREEKVNELLKTVGLNPSHSTRYPHEFSGGQRQRIGIARALAVNPRFIICDE PISALDVSIQAQVVNLLQDLQKEQGLTYLFIAHDLSMVKHISDRIGVMHSGKLLEMGTSD DVYNFGVHPYTESLLSAIPLPDPDYERTRKRIVYQPAAADGKDRELREILNGHYVYCAED EVAMYREKIEEKKRKAGL >gi|237663591|gb|GG668927.1| GENE 24 23976 - 25046 777 356 aa, chain + ## HITS:1 COG:DR1593 KEGG:ns NR:ns ## COG: DR1593 COG0675 # Protein_GI_number: 15806601 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Deinococcus radiodurans # 5 314 5 316 408 144 33.0 2e-34 MKALKAYKYRLYPTSKQEEFIQKTFSCVRLVYNLMLQDRIDIYKEMRKNPQQTFKMPTPA QYKKQYPVLREVDSLALANAQVYLDRAFKNFYREKGMGFPKKKKKETVHSYTTNNQHGTV KILDNRYLKVPKLKSLIKMKVHRQPLGEIKSVTISMSASHNYYVSILCEAPVETKTKQQK MVGICSSREKFALLSNGESFEKSYCSKHLKQKLRQEERKLNKRKMIALEKGVDLSQAKNY QKQKIKVAKIREKIANQRTDILNKITTELVSSYDVICIEKAHHSNERPPKHDRSELAWSL FLAKLLYKAQWYGKELICIESEEIETELSFSESTENSEYLRSQKILERGLSKRETL >gi|237663591|gb|GG668927.1| GENE 25 25445 - 25966 426 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 [Vibrio campbellii AND4] # 9 170 1 164 166 168 50 1e-40 MTIAKDMMVNDGIRARELRLIGQDGEQLGVKTKAEALQIAESANLDLVLVAPGAKPPVAR IMDYGKFRFEQQKKEREARKKQKVINVKEVRLSPTIDVNDFNTKLRNARKFLEKGDKVKA SIRFKGRAITHKEIGQKVLDRLAEETADIATVEQKAKMDGRSMFLTLAPKNDK >gi|237663591|gb|GG668927.1| GENE 26 26080 - 26280 340 66 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29375499|ref|NP_814653.1| 50S ribosomal protein L35 [Enterococcus faecalis V583] # 1 66 1 66 66 135 100 1e-30 MPKQKTHRGLAKRVKRTGGGGLKRGRAFTSHRFHGKTKKQRRQLRKASMVAKGDYKRIRQ QLARMK >gi|237663591|gb|GG668927.1| GENE 27 26341 - 26700 595 119 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29375500|ref|NP_814654.1| 50S ribosomal protein L20 [Enterococcus faecalis V583] # 1 119 1 119 119 233 100 3e-60 MARVKGGTVTRKRRKKVLKLAKGYYGSKHTLFKSAKEQVMNSYYYAFRDRRQKKRDFRKL WIARINAAARMNGLSYSKLMHGLKLAEIDINRKMLADLAVNDAAAFTALAEQAKDALSK >gi|237663591|gb|GG668927.1| GENE 28 26746 - 26886 69 46 aa, chain - ## HITS:1 COG:no KEGG:EF0917 NR:ns ## KEGG: EF0917 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 46 71 116 116 87 97.0 2e-16 MIALLKNQPGYFPAYHMNKEHWLSLSEEIPLSQVFSFIDESYQRSY >gi|237663591|gb|GG668927.1| GENE 29 26920 - 27096 195 58 aa, chain - ## HITS:1 COG:no KEGG:EF0917 NR:ns ## KEGG: EF0917 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 58 1 58 116 114 100.0 2e-24 MTFQETISAYIQERYQITPDFPFKKHPDYLVFRHPRNAKWFALIMPLDAQLLGATENK >gi|237663591|gb|GG668927.1| GENE 30 27194 - 27553 525 119 aa, chain + ## HITS:1 COG:L101688 KEGG:ns NR:ns ## COG: L101688 COG3759 # Protein_GI_number: 15673453 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 1 116 1 116 119 123 70.0 8e-29 MTLISTILVTLVAVEFFYIMYLETIVPTSETTSRVFKMDKQELQRKSVTTLFKNQGIYNG LIGAGLIYSVYFAQATMEMTKFLLIYIILVAAYGSLTSDKKIILTQGGLAIVALLSLLV >gi|237663591|gb|GG668927.1| GENE 31 27681 - 28115 593 144 aa, chain + ## HITS:1 COG:lin1092 KEGG:ns NR:ns ## COG: lin1092 COG0454 # Protein_GI_number: 16800161 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Listeria innocua # 1 142 2 142 150 108 40.0 4e-24 MLNQKEVKKNDYPQLISLWRSSVEATHLFLSQADIDKIEVVLPDYFQQVQLSMWLNEEQK CVGFSGTNQQTLEMLFIDPVYFRKGYGGEIIKKLIEQESIVFVDANKQNEGAVKFYQSQG FQVIGESKEDPQGNPFPILHMKRI >gi|237663591|gb|GG668927.1| GENE 32 28133 - 28648 195 171 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148360238|ref|YP_001251445.1| nucleotidyltransferase PLUS glutamate rich protein GrpB PLUS ribosomal protein alanine acetyltransferase [Legionella pneumophila str. Corby] # 3 165 175 342 601 79 31 8e-14 MRVIVTEYQPAWVEQFEEEAQALKQILKENCLKVEHIGSTSVPNLAAKPIIDFLVIVEEI EKVDLLQGEFERIGYEYMGEFGLSGRRYLRKGPIKRTHHVHIYQFDNTQEILRHLAFRNY LRENPAIATTYGTLKKQLAQAHPDSIDKYMDGKDAFIKKIEKEALKKYWEK >gi|237663591|gb|GG668927.1| GENE 33 28664 - 29839 1153 391 aa, chain - ## HITS:1 COG:PA2563 KEGG:ns NR:ns ## COG: PA2563 COG0659 # Protein_GI_number: 15597759 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Pseudomonas aeruginosa # 7 380 6 382 495 341 49.0 1e-93 MLFSIKKSEWLGNEQNDLFAGLVSSVAILPEVIGFAIIAGVHPLSAVFASAVTLLVITFT GGRPAMVSASAGSMALVLAGLIQAHGLSYMLAATILTGFLQFILGYLGIHKLMRFIPKTV MYGFVNALAILIFMAQVQQLPHQTLWSYGMIVCSILLIYLLPKFITIVPPALIVILFMTI LSYFLKGHLQTVGDLGEMSQFHPAIRWPNVPVNLETLWIILPSSVALAMVGLIESLLTIP IVDKMTTSQSDSQREVKAQGFANIITGFFGGQAGCAMIGQAVINVKSGGRKRLSTLISGI TLLLFIFVFKSVMVAIPTAALIGIMMTVAVDTFDWESLQLFRTFEITEIVILLVTVGVIV YTHNLAIGIILGVLLSGLLYHFFKKEPKKSC >gi|237663591|gb|GG668927.1| GENE 34 30142 - 31170 995 342 aa, chain - ## HITS:1 COG:L178384 KEGG:ns NR:ns ## COG: L178384 COG2855 # Protein_GI_number: 15672357 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 13 331 1 320 331 281 56.0 2e-75 MKNSENDYIQSLLQILPGLLTAFLVACLSKFFAIWLPSLGAATIAILLGIFLGNTFVRGA NLNRGTKVAESKLLEFSVVLLGTTVTFQTIAQIGLQGVAFILIQMSLTIIFAYLIGKKLA FSDNMSLLMAGGNAVCGSSAIASIAPAIQADEEEKGQIITLVNLLGTVLMLTLPILSGIL YGTNLLARSALIGGTLQSVGQVVASANMVNENAVQLAMLFKIMRIVLLVAVVYLFGRFKQ SKTAESEAELVEVTKKSSALPWYVVGFFIACVFNSLIHFPVVISETAHFFSSWFEITALA AIGLRLDFKKFFQEGKRFLIYGLSVGTVQVVLAILLLALLQF >gi|237663591|gb|GG668927.1| GENE 35 31313 - 32113 517 266 aa, chain + ## HITS:1 COG:L0220 KEGG:ns NR:ns ## COG: L0220 COG0583 # Protein_GI_number: 15672356 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Lactococcus lactis # 1 255 11 266 272 181 39.0 2e-45 MYEQMNFSKAATCLYISQPAVSNQIKQLEEELGCSLFLRNGRQDVVPTRQAEVLYNRLLN LADDWQETLTALHQARLPKETCRIAASNTFAVYYLPQLMQHLQTQYATINFVLEMNNSEE VVEKVEKHQVDFGFIEKPLITKGASREEIIQDQLVLAGDPANQNWLVREKDSGVFHYTQQ YLEESNQSPTLMTVKNNEMIVKMLELGMGQSLLSRKAITEKIPFQTLGEKYWRSFYFLTR GHLKSSLLQEVKQAIYRFYQTEMNKY >gi|237663591|gb|GG668927.1| GENE 36 32178 - 33050 965 290 aa, chain + ## HITS:1 COG:CAC3467 KEGG:ns NR:ns ## COG: CAC3467 COG3865 # Protein_GI_number: 15896706 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 288 1 294 294 172 33.0 6e-43 MPKFSPCLWFDTQAEEAANFYITIFEKGAILSKTNYVNEEHQPQGTSLMTIEFTLANQTI IGLNGGPEFSFTPASSFFVECKTLSQTETLWKNLTADGQILMPFGEYPFSPLYGWVVDKF GVSWQVSFSGKEQTIVPTFMFANEKYGEAAKALSEWLAIFGPGEIIEKVEYEDGNIAQAL FTLQEQPFRVMDARDKHDFDFTMAFSIYIDCENQEEIDRLWQQVTAKGKEWPCGWMEDQF GVSWQTGNPELKRYLSDSNPARANEVTKKLYQMKKIDLNQLKEVYDKYNH >gi|237663591|gb|GG668927.1| GENE 37 33133 - 33255 58 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSFKDQDLQLLKKGSILASSKEATSILFFILRVRTLPIFL >gi|237663591|gb|GG668927.1| GENE 38 33326 - 33550 296 74 aa, chain + ## HITS:1 COG:no KEGG:EF0925 NR:ns ## KEGG: EF0925 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 74 1 74 74 96 100.0 3e-19 MIELIVLLTVFTYGTNFVLYLILKNKKSMPIVEKASIVLGINMSVLLLDGIFAFVGKFIM LSEWELLAPIFEIV >gi|237663591|gb|GG668927.1| GENE 39 33639 - 34313 746 224 aa, chain + ## HITS:1 COG:CAC0224 KEGG:ns NR:ns ## COG: CAC0224 COG0745 # Protein_GI_number: 15893516 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 223 1 222 223 246 52.0 2e-65 MAKIMIVEDETTIRELISEELQKWQFETIGTTDFNDVLDDFQEENPQLVLMDINLPVYDG YYWCQKIREVSKVPIIFISSRSTNMDMIMAMNMGADDFVTKPFQIDVLIAKINALLRRSY NYSDTDSEVLSHNGITLNVDNGRMEIKGEMIDLSKNEYRLLYLLMKKHGKILTREKLLRA LWDDERFVDDNTLTVNINRLRKKIEQAGIAGYIETKVGVGYMVP >gi|237663591|gb|GG668927.1| GENE 40 34327 - 35352 934 341 aa, chain + ## HITS:1 COG:CAC0225 KEGG:ns NR:ns ## COG: CAC0225 COG0642 # Protein_GI_number: 15893517 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 340 1 336 339 201 33.0 3e-51 MTILKYLKDRWLLLIGWLFFLFLTCFILWLAPNVRLDWTVVGYIFLLQSVFLSLFLTIDY YLKRKWWLSLATEKEPPSLQEYLNTAEKEEELLVQTYINGLLQEHQQTMQQAINNQQDQK DYIDSWVHEIKVPLAAITLLVQSVEDDIPEKKYYLLENELGKIDEYVEQVLYYARLDSFS RDYLLQEYSLKEIVQSVVRTQANYFIQKRLQFSIEGEDEAVLTDRKWVIFIFRQLLSNAV KYTPEGGTITVLISKNKQGIYLSLKDSGIGIPMQDQRRIFDKGFTGENGRKSEQHSTGLG LYLAHSLAKKLGHDLTVESTEGQGTTMTLFFPSLSYYNEVK >gi|237663591|gb|GG668927.1| GENE 41 35500 - 36363 1042 287 aa, chain + ## HITS:1 COG:SPy2205 KEGG:ns NR:ns ## COG: SPy2205 COG4975 # Protein_GI_number: 15675938 # Func_class: G Carbohydrate transport and metabolism # Function: Putative glucose uptake permease # Organism: Streptococcus pyogenes M1 GAS # 10 287 1 277 277 232 48.0 5e-61 MSLLIALVPMIAWGSIGLVSGKIGGSANQQTLGMTIGALLFSIVIFFVIQPTLTTATLIV GFISGLFWSLGQNQQFHSMKYMGVSVGLPISTGMQLVVNTVAGAVFFHEWTKTKDFVVGF IALAFLVFGVYLTARQDDDSQPKTSNSMLDFNKGIRALIFSTVGYGVYTIIINATGLDPW GIILPQSIGMLVGASFFAFKKVKVDRFVWMNMTTGLLWGLGNICMLLTMREIGLAISFSL SQMGIIISTLGGIFLLGERKSKKEMFYVIFGCIFVILGGILLGYMKA >gi|237663591|gb|GG668927.1| GENE 42 36404 - 37795 1424 463 aa, chain + ## HITS:1 COG:lin0648 KEGG:ns NR:ns ## COG: lin0648 COG0531 # Protein_GI_number: 16799723 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Listeria innocua # 2 455 3 458 463 423 50.0 1e-118 MSIFRKKEITVPVNDSGGMKKNLKTMDLIFLGIGAVVGTGIFVVTGVAAERYAGPGLVLS FLVAAAAIILSGLCYAEFASRIPVIGGPYAYMYVVFGEIVAWMTGWMIICEFFLAVSSVA SGWSGYVHGFLDSLGFSLPQALSGAYNPTNGTYIDLIAMLVVVAVTFWVSLEAKTALRLN NLMVFVKFGIILLFVLVGIFYVKPTNWQPFIPYGFSGVFSGAALVFFAFLGFDAVSMAAE EVKNPKKDIPKGIIGSIIISTLLYIVVTLVLTGIVPFTDLGVKDPVAFAMRFINHGAIAT IISVGAILTLLTVTIAMMYSLARVIYAISKDGLLPKFMSKIDEKRHTPKNATYVAGFLAM VFAGVVPMEMLAELTNIVTLFYLMFLALGIIKLRTMKGEPQAGEFKVPLVPVLPLISIVV CAALMFQLSLATWQVFGIAVVIGLAIYFFYGRHHSIVRFETKE >gi|237663591|gb|GG668927.1| GENE 43 37983 - 39992 2348 669 aa, chain + ## HITS:1 COG:lin0216_1 KEGG:ns NR:ns ## COG: lin0216_1 COG0143 # Protein_GI_number: 16799293 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Listeria innocua # 3 544 4 547 549 808 71.0 0 MSQKETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMGFDVFYLTGVDEHGQKIEK KAAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIY LGEYEGWYSVSDEEFFTETQLAEVYRDDEGNVIGGKAPSGHEVELVKEESYFFRMSKYAD RLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSRTTFSWGIPLKNDPKHVVYVWID ALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWPIMLMALDLPLPKKVFGH GWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYD LANDLGNLLNRTIAMINKYCDGKVPAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNT AIAEIWTLVSRANKYIDETAPWVLAKEEEKRNELESVMIHLAESLRIVAILLQPVMTETP GKIFEQLGLDPETMNMENIHFGEFPTDVTVTSKGTPIFPRLEIETEVTYIQKKMSQSESA TEEDIKWNPEETTLVSTKEKQIKYDDFDKVELKVAEVIDCKKVKGADKLLQFRLDAGDEN HRQILSGIAEFYPDPAALIGKKVVIVANLKPRKMRGQISQGMILSAESPEGKLQIVEAPK EMPNGAGIA >gi|237663591|gb|GG668927.1| GENE 44 40092 - 40313 127 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517851|ref|ZP_03947900.1| ## NR: gi|227517851|ref|ZP_03947900.1| hypothetical protein HMPREF0348_0834 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis E1Sol] predicted protein [Enterococcus faecalis AR01/DG] hypothetical protein HMPREF0348_0834 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis E1Sol] predicted protein [Enterococcus faecalis ARO1/DG] # 1 73 1 73 73 129 100.0 9e-29 MAYHTYEFLKRRKNDPKWRKAYTSARNKRIIGALVTINIIIWGFVLWKKIESGDIEVNNI IDVLKSKINEFLN >gi|237663591|gb|GG668927.1| GENE 45 40371 - 40976 541 201 aa, chain - ## HITS:1 COG:no KEGG:EF0932 NR:ns ## KEGG: EF0932 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 201 1 201 201 305 98.0 9e-82 MKQSPDLENFLKTSIQKNVTIERKQQNQTIWHWLLLILFGLLTFGSLTQQLLLIGLFTLI AAIVKGPLMLVWGTIYSALVALFPPFALVLSLLFFIINLGTVMKSWRITLTSAYFYLIPL GFSLLKTTDWVSTPYFLTGLALLSILGLHFILEWLYKNNSLGRLLTWQIISVPFSLLLII LPSRLTKGRFGKKRIPKKVKL >gi|237663591|gb|GG668927.1| GENE 46 41097 - 43295 2323 732 aa, chain - ## HITS:1 COG:BS_yvgS KEGG:ns NR:ns ## COG: BS_yvgS COG3973 # Protein_GI_number: 16080398 # Func_class: R General function prediction only # Function: Superfamily I DNA and RNA helicases # Organism: Bacillus subtilis # 8 726 11 763 774 266 28.0 8e-71 MTDEKIYEQQHLTTVYHELQAAKKVYEEQLANTMKDGKHMLEEFGRDSKLNFDSYADNLE TFAMLEMKNREIDQWNLKNEATAKNLDKVKRLLQVPYFGKIGVTFEDSPEEPENFYIGVN DFTSLEEETRIHDWRSPIASLFYDNVLGKTAYIAHQQTIPVQLDLKRQLIIEKDQLINYF DTTIAIQDDVLLHSLEEDASPYMKDITTTIQQEQNQIIRDETQPLLLVNGIAGSGKTSAI MQRIAYLLYQHRAEITADNILLLSPNSTFIDYISQVLPNLGERNPLNLTLLQFLRFTTKE AWPMEEEKDYFERITRSEVTEQEHVIRSKEFATFLLSNPEKAVVQPHFFRPLTFKKQTLF TSETIFKLYQETPADLSIRQRISATKEKLTSLWTRYLLKQAHSKKMLDQFQDLTEAEQVR YFGTVITEDNEKHLADFALKRLKKKYRSITAAIKNDAWLDQWAFFETFYSLFTGKSYQKE TAVFTADEIVALILVKHAFIENLANQQMAFILVDEVQDYTEAQLLLLLTLFPKASFTLAG DENQAIFNTAIEFSEAHDLLVNETSRSVGTYQLLNSYRSSKEITRLFQTLGTQPEQLTIV PIRHDGEKPTFIPCDSASDYLKAIVTSIATFDPKESTAIITKTFAEKEQLTKELSASLSL EEHPSLQVLSIDMAKGLEFDNVILHNPNVNRYSDNKRDKKILYTAISRGMKRVVLPYTGT LSEWFTPYLASQ >gi|237663591|gb|GG668927.1| GENE 47 43454 - 44224 951 256 aa, chain + ## HITS:1 COG:SPy0260 KEGG:ns NR:ns ## COG: SPy0260 COG0084 # Protein_GI_number: 15674440 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Streptococcus pyogenes M1 GAS # 2 255 21 274 274 320 61.0 2e-87 MIFDTHTHLNAEQFNDDIPETIAHAQELGVTEMAVVGFDEPTIEKSLLLSQEYANIYSII GWHPTEAGSYTPEVERRLQEQLTLPKIVALGEIGLDYYWMEDPKEVQEKVFRRQIAIARE MNLPFSVHTREALEDTYRILKDEKISDIGGIMHSFSGDAEWMKKFLDLGLHISFSGVVTF KKALDVQEAAMAVPLERMLVETDAPYLAPVPYRGKRNEPGYTRYVVEKIAELRQLTFEEV AEQTRVNAHRLFRIDK >gi|237663591|gb|GG668927.1| GENE 48 44233 - 44805 796 190 aa, chain + ## HITS:1 COG:BS_yabF KEGG:ns NR:ns ## COG: BS_yabF COG1658 # Protein_GI_number: 16077109 # Func_class: L Replication, recombination and repair # Function: Small primase-like proteins (Toprim domain) # Organism: Bacillus subtilis # 1 189 1 186 186 170 53.0 1e-42 MKVAEIIVVEGKDDTRRIQEVVTADTIETIGSAINDEILTQIEHAQETRGVIIFTDPDYS GEKIRKTIMEVVPDAKHAFLSRKVAVPKKNGGSLGVEHASDEAIIEALKKVVTPVQADED YQEIPRQTLVEYGLIAGANAKKYRELLGDDLRIGYTNSKQLVKRLSMFRITEAELKESMT RILKELANEE >gi|237663591|gb|GG668927.1| GENE 49 44824 - 45711 915 295 aa, chain + ## HITS:1 COG:SPy0262 KEGG:ns NR:ns ## COG: SPy0262 COG0030 # Protein_GI_number: 15674442 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Streptococcus pyogenes M1 GAS # 7 291 3 287 290 352 63.0 5e-97 MTDYKEIATPSRTKEILKKHGFSFKKSLGQNFLTEPNILRKIVETAGINQQTNVVEVGPG IGALTEQLAMNAAQVVAFEIDDRLIPVLADTLSRYDNVTVVHQDVLKADLVETTNQVFQE KYPIKVVANLPYYITTPIMMHFLESSLDVAEMVVMMQKEVADRIAAKPGTKAYGSLSIAV QYFMEASVAFIVPKTVFVPQPNVDSAIIKLTRRATPAVTVTNEKEFFKLTKASFQLRRKT LWNNLTHFYGKDEQTVAWLKESLAEAEIDPSRRGETLSLEEFARLSNALEKNKPV >gi|237663591|gb|GG668927.1| GENE 50 45838 - 46455 704 205 aa, chain + ## HITS:1 COG:no KEGG:EF0937 NR:ns ## KEGG: EF0937 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 205 1 205 205 329 100.0 5e-89 MKTNSVKRLTISALLIAMGIIIPMVMPRITIGPASFTLASHVPVFIAMFISPVVAIAVSL GTGFGFFLSATPIIALRALSHLIFAVIGAVILQKHPEILINKEGKFTLLNGKLQLFNVGI GVIHSAAELVVVSVFYTMGNLPGTYYTAGFMYSIFLLMGVGGLIHSLVDFSIAYFLASTL SKHVDIPTFTEAKQPKVIKKKVKLA >gi|237663591|gb|GG668927.1| GENE 51 46506 - 47609 1524 367 aa, chain - ## HITS:1 COG:SPy1976 KEGG:ns NR:ns ## COG: SPy1976 COG3839 # Protein_GI_number: 15675768 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Streptococcus pyogenes M1 GAS # 1 367 1 377 377 521 68.0 1e-148 MVEMALRNVYKKYDNAEHYSVTDFNLEITDREFIVFVGPSGCGKSTTLRMIAGLEDITEG ELSIGDKVMNDVAPKDRDIAMVFQNYALYPHMTVFDNMAFGLKLRKYDKAEIKKRVENAA DILGLTEYLQRKPAALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVAMRAEIAK LHQRLETTTIYVTHDQTEAMTMADRIVIMKDGFIQQIGSPKEVYNTPKNMFVAGFIGSPA MNFFKVTLNNGVISNQHGLKLAIPEGRNKELVEHGYEGKELIFGIRPEDIHSEQVALTAM KDAVIKSEVVVSELLGAESMLYTKIGDTEFISKVDARDFHHPGEMIDLAFDINKGHFFDP QTEEVIK >gi|237663591|gb|GG668927.1| GENE 52 47795 - 48217 550 140 aa, chain + ## HITS:1 COG:lin2020 KEGG:ns NR:ns ## COG: lin2020 COG1803 # Protein_GI_number: 16801086 # Func_class: G Carbohydrate transport and metabolism # Function: Methylglyoxal synthase # Organism: Listeria innocua # 1 129 1 129 134 204 76.0 4e-53 MKIALIAHDRKKTLMIKLATAYKHILEKHELYATGTTGMKVMEATGLPVHCFKSGPLGGD QQIGAMISEDNIDLVIFLRDPLSAQPHEPDVTALIRLSDVYEIPLATNIGSAEILLRGVE AGFADFREVIHEGDRRPLAF >gi|237663591|gb|GG668927.1| GENE 53 48491 - 49030 540 179 aa, chain + ## HITS:1 COG:no KEGG:EF0940 NR:ns ## KEGG: EF0940 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 179 1 179 179 296 99.0 3e-79 MTKKKFGTKSIALMGVLIAVVVVFSRFFAYETTFLKISFTFIPESLIGMIFGPFWAGIGT ALADVVGMLLFPKAGYFPGFTLNAFLAGAIYGYFYYKKEMTWQRVILATLLVTVLINIIL TPLWLSLMYGVNLANFAWWVPRLIKTVIFFPIQVIATYYLGNKIPFKRLFGKPLSELDQ >gi|237663591|gb|GG668927.1| GENE 54 49082 - 50848 213 588 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 348 572 132 356 398 86 28 6e-16 MQTKKIHFGAFSRFKPYLLRYPKEIIGALILGILSGFSTVLMTYYIGKSVDTMVGKGQVN AAQLIKILGLLAGILLVTVLSQWLIQRLGNRVSYLSTTQLRKDAFAHLNQLPLSYYDQTS HGNIVSRFTNDIDNISMACSAVFNQLFSGMATVVVALLFMIRLSPLLTLVVLISTPIIFI VNWLVAKASQKNFAAQQTIVGEISGFVSEMVGNQKIVKAFQQEQATQETFEALNQTLYEK GQKAQFSSSLTNPLSRFIDHLSYLSIGLVGGLLVLSGNPLVTVGVISSFTIYSSQFSKPF IELSGITNQIQAALAGLERTFDMMDQPVERPDAPNAIVLKEARGRVEFKDVDFSYTPTRP LIENFNLIAEPGETIAIVGRTGAGKSTLVNLLMRFYEVDRGQITVDTHDITQITRDSLRK SFGMVLQDTWLFDSSIRENLTYGNPEASDEEIIEAMKKAHIFDFVMRLPQGLDTQIGSQG VKISEGQRQLMTIARTMISNPPMLILDEATSSVDTLTEQKIQDAFLQMMTGRTSFVIAHR LATIKSAEKILVMDNGQVVEIGTHDELLQKEQGYYRDLYEAQFNQKAQ >gi|237663591|gb|GG668927.1| GENE 55 50838 - 52565 182 575 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 347 555 19 224 305 74 27 3e-12 MFGLLKYAKNYRKQIILGPVFKFLEACFELVLPLFMAHLVDVGIRQNDRQTVIEMALWML VMSLVGLFFVMICQYYASVASQGFGTELRNQLMKKINQLSHKELNSFGTDTLITRITNDI NQLQLALAMFIRLVIRTPFLSIGSVVMAFYIDVQMGFLFLLLLPIFSLILFIIIKVTVPL YQKVQEYLDRLNRQISQNLSGVRVIRAFARKETEQRHVDKASDDLGDIYIRVSNVSALLT PLTTLIMNVGILFLLYFSGLKVSFGSLQQGEVLALINYMNQMMLALIVASNLVVIFTRAA ASANRVNEVLTVESQLTDTPESAKTSPQFGDITFDHVDFRYEPEAGLALENINFTIPKGS ILGITGPTGSGKSTLTQLIPRFYDVSAGNLFINGINVRDWPLFTLRQQVASVPQTAVLFT GTIRENLQWGKPNATDEDCWEALAIAQCKEFVEQLDQGLDTPVNEGGKNFSGGQRQRLTI ARALIRKPHLLILDDSLSALDYQTDLNLRRALQKERAETTVILISQRVSSIATANQILVL DSGKVAGLGTHEELLTSSKEYQEIVASQEEDTHAN >gi|237663591|gb|GG668927.1| GENE 56 52691 - 53458 562 255 aa, chain + ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 4 235 3 249 270 197 38.0 1e-50 MEKMSQIILLFFIYSFIGWLWETVYCSLKAKKFVYRGFLVGPYCPIYGFGVLSVLYFVEP FENNLLVLYIGSAVLVTILEYVTSYGLEKLFHASWWDYHDVPFNLNGRVALPVSLFWGLG CVLIVKVIQPEIAKVVSFLQVTFGNYLALCIVIVMGLDLIYTLLNMQGFKKLITEMGQTL ETNQQEFKQRLNTKMEIATADWQKLKERTKKEHFQNRLNFQQRRFINNYPKLTLKNIKNS KEVRHLLEDLKKKGQ >gi|237663591|gb|GG668927.1| GENE 57 53719 - 54927 1367 402 aa, chain + ## HITS:1 COG:lin0225_2 KEGG:ns NR:ns ## COG: lin0225_2 COG3584 # Protein_GI_number: 16799302 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 310 401 1 89 91 106 57.0 1e-22 MKVKKLIPFLTTMMLINFGLPVAAAAESLDSLQEKEAQAKQSGELISKEINSALDDVNAK YAEIERLKTQISKAEETLKTSKEEIEKTEKNISRRKEAVGDRMKDIQLNGDQRTWQALLD AENLSDFFNRAYAMTVLQNFEREKIESLTSEKEKLAALQEKVENTQTTLKQNEEKLQVEA SSMNNKVSELKEKMANNEELLAQISTDKQKEQQRLVSEKAAAEAQKKRAAETAKAEAAKK QAAADKQAQADAAAKLEAEAAEESSSQASSSSTSTESSSTESSSSASSSESSSTTESTTD ESSTPGTGSGRVLQMESTAYSWREAGASNLSATGIDLSKQSNVIAVDPSVIPLGSLVKVS GYGFAIAGDTGGAIQGNIIDVHFDSVEQCIAWGRRQVTVEIQ >gi|237663591|gb|GG668927.1| GENE 58 55024 - 55587 875 187 aa, chain + ## HITS:1 COG:lin0816 KEGG:ns NR:ns ## COG: lin0816 COG0454 # Protein_GI_number: 16799890 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Listeria innocua # 1 185 1 185 185 172 47.0 2e-43 MIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVY EHAGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDE RFRGMGIGSKLLDALPEVAKASGKRALGLNVDFDNPGARKLYASKGFKDVTTMTISGHLY NHMQKEV >gi|237663591|gb|GG668927.1| GENE 59 55676 - 56200 463 174 aa, chain - ## HITS:1 COG:BS_yxjI KEGG:ns NR:ns ## COG: BS_yxjI COG4894 # Protein_GI_number: 16080945 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 159 1 159 162 66 27.0 2e-11 MSEFFIQEQQLGKVTRTIVKDQAGRSLFLLVGRWGTRGDALSLYAMNGEILASIKQVSWT FGTRFELYQRFEKVGTLRKLFNLNADFYYVQGLHWAVVGDIKAHQYSIYQVHKKIMSMDK TMLCTGDYFVLTVANDEDAPLCICIAAVLDYWLYNKKKQKTSDDFGLDFDPLTD >gi|237663591|gb|GG668927.1| GENE 60 56252 - 57121 973 289 aa, chain - ## HITS:1 COG:BH1746 KEGG:ns NR:ns ## COG: BH1746 COG0561 # Protein_GI_number: 15614309 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Bacillus halodurans # 2 281 1 277 282 172 38.0 5e-43 MIKLIASDMDGTLLDAKMSITNDNASAIREAERLGIEFMVATGRAYTEAKPALEEAGIDC AMITLNGAQVFDKDGHSLFTAGIEKETVTEVLTILSQHNVYYEISTNKGIFSEHQEKRIE NFAAHIAESMPHLTYKVAIAMASAHLSLLHITYVDRLDDILKDDSIEVLKIIGFSMDGPK VLGPAGMEVEELDDLVVTSSALNNIEINHRLAQKGIAVARVAKERGIPAEQVMTIGDNLN DVSMIQWAGVSFAMGNAELELKEYAKYETATNLENGVGEAILRAIREDL >gi|237663591|gb|GG668927.1| GENE 61 57255 - 57935 799 226 aa, chain + ## HITS:1 COG:BS_ung KEGG:ns NR:ns ## COG: BS_ung COG0692 # Protein_GI_number: 16080848 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Bacillus subtilis # 1 220 1 220 225 312 69.0 4e-85 MKEIIHNSWQTVLSAEFEKPYYQELREFLKKEYQTQTIYPDMYHLFSALELTPFEEVKVV ILGQDPYHGPNQAHGLSFSVQPGVKVPPSLANIYKELQADLGYQPVNHGFLESWAKQGVL LLNTVLTVRAGQAYSHRGKGWEQLTDVIIEKLNEREKPVVFILWGRPAQEKIKMIDTTRH VIIKSPHPSPLSAHRGFFGSRPFSQANAALERLGETPIDWQLPETV >gi|237663591|gb|GG668927.1| GENE 62 58091 - 59074 1226 327 aa, chain + ## HITS:1 COG:L107797 KEGG:ns NR:ns ## COG: L107797 COG0280 # Protein_GI_number: 15673641 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Lactococcus lactis # 1 324 1 325 326 421 67.0 1e-117 MELFDSLKFKVVRRNIKIVFPEATDPRILGAAARLKSDELVEPILIGDPTDIANAAMARG INTSNFIIINPNDYEKWDEMVEAFVERRNGKATKEDAEKILKDVNYFGTMLTYMGIADGM VSGAIHSTGDTVRPALQIIKTKPGVSRTSGAFLMIRGRDQERYLFSDCAINVNPTAQELA EIAVDSAKTAELFDIEPKVSLLSFSTKGSAKAPEVTKVAEATKIAQELAPEYAIDGELQF DASYVSSVAQLKAPNSKVAGEATVFVFPDLQSGNIGYKIAQRLGNFEAIGPILQGLNKPV SDLSRGANEEDVYKLSIITAAQTLMND >gi|237663591|gb|GG668927.1| GENE 63 60772 - 61251 583 159 aa, chain + ## HITS:1 COG:BS_ydiB KEGG:ns NR:ns ## COG: BS_ydiB COG0802 # Protein_GI_number: 16077658 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Bacillus subtilis # 7 139 10 140 158 149 55.0 2e-36 MNIVLNNPLETEAIAKIIGQKAQAGDVIVLTGDLGAGKTTMTKGIALGLGISQMIKSPTY TIIREYPQGRLPLYHMDVYRVEEGADELGLDEYFEGDGLSVVEWGILIEEELPEDYLEII LNKDSQEADKRVLEFRGTGPLAEERIAEILQVWEAREYD >gi|237663591|gb|GG668927.1| GENE 64 61244 - 61765 215 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229236145|ref|ZP_04360568.1| acetyltransferase, ribosomal protein N-acetylase [Chitinophaga pinensis DSM 2588] # 4 164 9 170 181 87 28 4e-16 MTEQTFSIREAVPTDADQLLSVMSKIGSETPYLVMDERGMAMSTTELAENLATLYESPNN VLLVALAGKAIIGTASVSASSKKRMEHIGEIGISILKEYWGYGLGSILMEELIRWAHESH VIRRLELTVQDRNQRAIHVYKKLGFETEAIMPRGAKTDQGEFLDVHLMRLLID >gi|237663591|gb|GG668927.1| GENE 65 61935 - 62144 307 69 aa, chain + ## HITS:1 COG:no KEGG:EF0953 NR:ns ## KEGG: EF0953 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 69 1 69 69 105 100.0 6e-22 MAKATKMNVNYRESILDRAYRLELIKKDEYAKHQEKLSLLNEKLSDGEPAQFDAKEETFW KKISQKVIL >gi|237663591|gb|GG668927.1| GENE 66 62218 - 63228 932 336 aa, chain - ## HITS:1 COG:SPy1293 KEGG:ns NR:ns ## COG: SPy1293 COG1609 # Protein_GI_number: 15675246 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 3 332 2 334 339 282 45.0 5e-76 MAITVKDVAKKAGVATSTVSRVINDHPSISESTKKKVRKVMDDLGYVPNMTARNLGKRIS SAIGVILPPLDSKERLGNPFYLEIMEAINEEARLYDMTTAIATAKSFDVLLENVKRMHLQ KQVDGFILVYSDSKDPVIDYLYENNIPFTLIGQPYQHETEIVYVDNDNQLLGKQATEFLI ENGHKNILFVTNTTHESLYFERYFGYQKAMMMQGLTVLPSVALEKPEDYMAFDDILHQNN ATALVVIDDIFALRTMQLAQIYGYQVPETLSIISFNNSIFSTLTHPYLTSIDIDTSELGR MAMKKLYELIHEELTNGVRLVIPHKLIKRETVIPIH >gi|237663591|gb|GG668927.1| GENE 67 63252 - 64259 320 335 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 27 331 29 341 345 127 29 3e-28 MKDNRITVTGIPNTNLKKITLKNDFLEVVLLNYGARLHQLLMPNKNNHWENILLSYDSYQ DVLKDQSFFGATVGPVAGRIRNGHWQNGILEQNSDGHHIHGGSKGWSFQYWTVEPFEKKD IIGVAFHLTDTLSGYPGPIEATITYQLEDNHLRMISTGRSKQETLFNPTNHAYFNLSGNG KLDILSHLLSLNCQGMLELDDNKLPTGRILPASELSIRFNELTPIETILQRYPTGLDDVF PLVGSDLRQPQLCLQEPTSGRKMTIATTNQSMVLFSTTGFEAPFSINGQAMHSNYGLAIE PQEYPDIVHHPQWGSILLPANKKQTYQTVYQFNLL >gi|237663591|gb|GG668927.1| GENE 68 64249 - 64917 676 222 aa, chain - ## HITS:1 COG:L0001 KEGG:ns NR:ns ## COG: L0001 COG0637 # Protein_GI_number: 15672411 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Lactococcus lactis # 1 221 1 220 221 275 64.0 4e-74 MFKGVLFDLDGVITDTAEFHYHAWKKLGNEIGISIDRVFNEQLKGVSREDSLQLLLKYGK KEGTFSSEEFAQLAQRKNDYYLEMIQAITPEDVYPGILSLLTELREANIKIALASASKNG PFLLEKMQLTPLFDAIANPADVQAGKPAPDIFILAAKEIDLTPAECLGIEDAKAGIQAIL ASGAQPVGVGRKEELGEGLPIVPETSALTFDYLKKVWLDHEG >gi|237663591|gb|GG668927.1| GENE 69 64910 - 67204 2148 764 aa, chain - ## HITS:1 COG:NMB0390 KEGG:ns NR:ns ## COG: NMB0390 COG1554 # Protein_GI_number: 15676304 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Neisseria meningitidis MC58 # 6 759 4 752 752 936 63.0 0 MKQIKRLFQIDPWKIRTTHLDKENLRLQESLTSIGNGYMGMRGNFEEHYSGDHHQGTYLA GVWYPDKTRVGWWKNGYPEYFGKVINAINFIAMDLQIDGQTIDLATTPYEDFSLELDMQN GVLSRQFTIQTPKNKVRFSFERFLSLEKKEAAYIHLTIEMLEGTGTITLHSKLDGDVQNE DSNYEEHFWEERAIETQETLGFVTTKTIPNNFEIERFTVTAGMRHFIDGAAVVPTYTQQP LALTAELTVSLKEGDTTAITKEVLVVTSRDVPETQQITRVNELFAEMTTLYPEAKARQAA AWAKRWQLADVVIEGDDEAQQGIRFNLFQLFSTYYGEDDRLNIGPKGFTGEKYGGATYWD TEAYAVPLYLALAKPEVTKNLLKYRHNQLPQAIHNAQQQGLKGALYPMVTFTGVECHNEW EITFEEIHRNGAIAYAIYNYVNYTGDEDYLKDAGLEVLVAIARFWADRVHFSQRHKQYMI HGVTGPNEYENNINNNWYTNTIAAWVLRYTRESYLKFQEETTLKIADDELAKWADIVENM YFPVDNELGIFVQHDTFLDKDLMPVSDLPLSELPLNQHWSWDKILRSCFIKQADVLQGIY FFNDAFSLEEKRRNFNFYEPMTVHESSLSPSIHAVLAAELGMEEKAVEMYQRTARLDLDN YNNDTEDGLHITSMTGSWLAIVQGFAQMKTDHQQLKFAPFLPATWTAYSFHINYRNRLLF VEVAADQVAFTLLDGPAIPLTVYDQKYTLKDRLVLPIRKEEVHV >gi|237663591|gb|GG668927.1| GENE 70 67485 - 69653 2591 722 aa, chain + ## HITS:1 COG:SPy1986_1 KEGG:ns NR:ns ## COG: SPy1986_1 COG1263 # Protein_GI_number: 15675776 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pyogenes M1 GAS # 2 454 6 457 472 656 71.0 0 MKKMFSFEFWQKFGKALMVVVAVMPAAGLMISIGKSLPLIDPNLGLLVTTGGVLESIGWA IIGNLHLLFALAIGGSWAKDRAGGAFAAGISFVLINRITGAIFGVTNEMLADEQAFTHTL FGTKIMVKGFFTSVLEAPALNMGVFVGIIAGFVGAMAYNKYYNYRKLPDALSFFNGKRFV PFVVILWSTIVSIALALIWPNIQAGINNFGLWIAQSQDSAPILAPFLYGTLERLLLPFGL HHMLTIPINYTQLGGTYEILSGAQAGTQVFGQDPLWLAWATDLVNLKGAGDMSKYQFVLE NWTPARFKVGQMIGSSGILMGMALAMYRNVDADKKAKYKSMYFSAALAVFLTGVTEPLEF MFMFAAVPLYVIYAVIQGAAFAMADILPLRVHSFGNIELLTRTPLAIKAGLGGDLINFVL MVIIFGVVTYFLANFLIKKFNYATPGRNGNYDNDNGEEIASGAAGSGVVDQQIAQIVYLL GGKQNIKEVDACMTRLRVSVKDREKVGSEEAWKRAGAMGLIVKDNGVQAVYGPKADVLKS DIEDLLASGVDIPEPVIAESTTGVPTTNFLGKKKDFVAVATGEVIPMAQVNDPVFSQKMM GDGFAVKPLEGEVVAPISGKVLSVFPSKHAIGLQTEEGIEVLVHMGIDTVEMATPAFESF VKEGQSLKAGTKLAKMNLDVIEQAGKETTIIVAFTNSDKVEQVVINQLGTATAGTVIGQI EI >gi|237663591|gb|GG668927.1| GENE 71 69719 - 70543 896 274 aa, chain + ## HITS:1 COG:SPy1985 KEGG:ns NR:ns ## COG: SPy1985 COG3568 # Protein_GI_number: 15675775 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Streptococcus pyogenes M1 GAS # 3 273 4 269 272 213 40.0 2e-55 MNLLTINTHSWLEEEPLKKLEEIAKVILSSESEIIALQEVNQKVASKKVPLEQLTTFCPV ATQTPVHEDNFAYLIVQYLAEKGQHYYWSWEMSHIGYAIYEEGNALLSKCPLTSEALLIS ESQEPTNYRTRKILVAETESSKGTLTVVSGHFSWWETPCTGFAYEWLQLEKYLATGQQPL VILGDLNNPAGTTGYQLVENSYLPIQDAFVVAEETSGEATVEKKIDGWEENEAALRIDYA FVPKQWHVRKYEVIFDGRKTPIVSDHFGLLIQLK >gi|237663591|gb|GG668927.1| GENE 72 70603 - 71418 1094 271 aa, chain - ## HITS:1 COG:L135991 KEGG:ns NR:ns ## COG: L135991 COG0345 # Protein_GI_number: 15673866 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Lactococcus lactis # 3 267 4 262 262 181 42.0 2e-45 MKISFIGAGNMASAIAKGALKKQFIAAENLYFYDIQVKKTAAFAQEIGAHAVASPQEAIA VADLVILAVKPQFVQAALLEAKEAILDKQPLIVSIAAGTTIAELYQLFETTQPLRLVRVM PNMNALIGAGAAAVCGNAFASPEDIQTVLSLFRAVGQAWELEEQYFSIFTAIAGSTPAYA FLFIDSIARAAVKNGMSKELALEIATQAVLGSAQTLANSKENPWTLIDQVSSPGGTTVAG IVELENNAFISTVIKGIEATIFRDQELAKQD >gi|237663591|gb|GG668927.1| GENE 73 71545 - 72507 675 320 aa, chain + ## HITS:1 COG:BH3679 KEGG:ns NR:ns ## COG: BH3679 COG4753 # Protein_GI_number: 15616241 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 190 309 141 254 257 84 40.0 3e-16 MASKEEQYAAFYQFLETLDCYLTTTNALENEVAQFKENPHREIAGFMLASSETIDVPKGF IRMLYCLEQDGNAYLDQQRCSFSAGQVMIVNEATSVSYQGQGMSMIIFYFKKHYFLDTLL NQLAEEPVMYRFFTEIASSEFENIPRYFVFASQPNSDVHVYSLLLLKQIVKMAYFNTKVT KAAFVLLVVELGQLPREALKMQDNYLSNHQRVEVILAYIEQQIAHVTLAEVAAKFHFHPN YLSNFLKDKTNKTFTEIVLAYRIQLAKNYLKQTDLSIQTIVERIGYQDNAFFYKRFKEEM GMTPKQYRQKEGMADVRRSL >gi|237663591|gb|GG668927.1| GENE 74 72488 - 72787 369 99 aa, chain + ## HITS:1 COG:no KEGG:EF0963 NR:ns ## KEGG: EF0963 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 99 1 99 99 147 100.0 2e-34 MYEEVFEEFQLTVVELPIEFVDDLPVYRGHLKELTFLSAEASSRKKLYQQLLQAYLLYRE ENQAVVEEEEITSSLLSTEQLLKYYDGETFDGFQLPSNE >gi|237663591|gb|GG668927.1| GENE 75 72804 - 73094 368 96 aa, chain + ## HITS:1 COG:BH3997 KEGG:ns NR:ns ## COG: BH3997 COG1694 # Protein_GI_number: 15616559 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Bacillus halodurans # 3 96 7 101 101 107 62.0 7e-24 MDIMEKINQFRDERNWRPHHNEKDLALSICLEAAELLELFQWKTAEEGIKQEERIKEELA DVLIYSYMMADNLGFDLDEIIEEKLKKNALKYPVPH >gi|237663591|gb|GG668927.1| GENE 76 73254 - 73967 336 237 aa, chain - ## HITS:1 COG:no KEGG:EF0965 NR:ns ## KEGG: EF0965 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: ABC transporters [PATH:efa02010] # 1 237 1 237 237 288 99.0 1e-76 MELKKTISNKIMIILIAIIVAIFAMGWILPIGIDKVTRLSYREYLFSTYTVFTQFGFLMF SFLVSFFINKEYSGKTILFYRMMNTNSLTFYIKKVLTLTVETLGSILVLLFIVSFIFMDF SVILQMFFLLSMISIQYILIVALISFLSANVLLSIGFSILYWITTVLFVAIGGFLRFFAI FDASNELYLNVQNFLEGSENSISFDHNLLIILYIIVLTVIALAIARVNNKRWLRLGV >gi|237663591|gb|GG668927.1| GENE 77 73972 - 74604 482 210 aa, chain - ## HITS:1 COG:Cgl0491 KEGG:ns NR:ns ## COG: Cgl0491 COG1120 # Protein_GI_number: 19551741 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Corynebacterium glutamicum # 2 191 5 215 264 64 25.0 1e-10 MLELNDYTLKINNKLLLEHTKVSFRKGVINHILGKNGVGKSQFAKDLLLNRGGLIPSEIS KNVTIISSFSNVPNDLKVCELFILLEKRFGLDSVAHLAHSLHATNISKTSLIGQLSDGQK QKLKLLSFFLEDKSIIVLDEITNALDKQTINEIYLFLLAYIKNHPKKIILNITHNLSDLK NLKGNYYLIEDFKMIRFTNQTEVIQKYIEG >gi|237663591|gb|GG668927.1| GENE 78 74615 - 74764 100 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257086304|ref|ZP_05580665.1| ## NR: gi|257086304|ref|ZP_05580665.1| conserved hypothetical protein [Enterococcus faecalis D6] conserved hypothetical protein [Enterococcus faecalis D6] conserved hypothetical protein [Enterococcus faecalis TX2137] # 1 49 202 250 250 77 97.0 3e-13 MLNSDGYKVLITLFSVDELENKRKNHLIVKLIQAISLLLVIETVISWFV >gi|237663591|gb|GG668927.1| GENE 79 74770 - 74979 58 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227517887|ref|ZP_03947936.1| ## NR: gi|227517887|ref|ZP_03947936.1| conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis TX0104] # 1 69 130 198 198 108 100.0 1e-22 MNYYIFPAIYVEMNEIYLISKNEKIIVHLAGLITNYLTINFIQVINLLFLKNKILDSSFI FFHMRCYGI >gi|237663591|gb|GG668927.1| GENE 80 75350 - 76297 367 315 aa, chain - ## HITS:1 COG:BS_yydG KEGG:ns NR:ns ## COG: BS_yydG COG0535 # Protein_GI_number: 16081069 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Bacillus subtilis # 1 313 1 315 319 323 49.0 2e-88 MYDSVVVNLGARCNASCEHCCFSCSPTKKEALDKNEVINLVENFSNNPKIKTISFTGGEI FLNYPFLYNLLKIVNSSGKISTLISNGFWGREIETVKKYFLDMNRMGVTNLSISHDDFHS KFIKTDYIRNILIESRKYPDIQITVNIAVSKNSTGDKIIHDLGEAILGIPVTKFPLIPVG EAKNINDDEFQNIYSLSHPNQLKCPGFEPVYHFNGNVYPCCSPAIFDTALILNDELYQEF DKTITKMNSNLLLYIMRREGFSWFINIVSNNNEFSHIKINKEFSSICSICRQLFKTENNI KLLTPYMRKYYEQML >gi|237663591|gb|GG668927.1| GENE 81 76393 - 76512 211 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKELEMKELVEKSEKLAKINDLWYFVKSKGGAWIAGSGK >gi|237663591|gb|GG668927.1| GENE 82 76905 - 77681 732 258 aa, chain + ## HITS:1 COG:all0345_1 KEGG:ns NR:ns ## COG: all0345_1 COG0789 # Protein_GI_number: 17227841 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Nostoc sp. PCC 7120 # 1 113 21 133 135 70 32.0 3e-12 MYQIGQFAKLMDISPRMLRHYEKAGIFVPNEIDKKTGYRYYSAHQIPLLKQILLLRDSGF KVEEMAETLRKLKDASFLETILLRKRDQSRHLIQMEEQKIKKINQQLVALKEEKQMIKGT EIDFIVSDSLKALALYKKVFEIEVVEATEYPIGMNEAVFQLYGTRFHMLDANEEYGLKAP TQEHPNTIWFNITVENIEETHQLAMENGCQEVQPITEMMEGALKNSLFVDPYGYMWMLHQ IYQELSFDERIEILENEL >gi|237663591|gb|GG668927.1| GENE 83 77923 - 79815 1041 630 aa, chain + ## HITS:1 COG:CC3456 KEGG:ns NR:ns ## COG: CC3456 COG1512 # Protein_GI_number: 16127686 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Caulobacter vibrioides # 73 189 84 198 306 72 36.0 4e-12 MYGKNKVGIKLQMSVGEYRKTKVKSIIMKNLVYLAILLIGIYLGMSFLKRFERTYSAPTD DVVVKINQNHLFVSDNAQILNEEVINNVQKINQELSKTETKPQLMVITVEQVPENETIES FTNQIGNKLGIGNKLYNNGVIYLVSVKDRQARLEVGYGLEEIIPDSLTDEITDSTVKDFY KLKDFNAGIHIVTTRIKELLTTDTMSKTTSLPKISFLQKIWLYLLGIGRSLKPWLIIVFI IVMLYFLWELRNAGKELSARLALVDMANRYKEDVAMFYNGGISSKAIVLGEQSVEFKAAK ARLEKNILYPENSKKEIIIPAYYDMDFAFGEVTPKKFIYNYVAQWKDLRSSSMCACFWKV NQPWIYLPRFWIGEVYWEKVPETKLPACRISGINDNLIPAYLKIILFPLSILLKHPFLVS VTLIIYVQVSLSEQSFPSTVFTLITEILTFLEDEDSLVPMVSLVYFLIPVFFLFGYIKSI GVGLQNRLHLDSMIRRFLKDIQQVSSEKSKSLKQLANDLDNQHYKIEKKLLRKKIREKKI TNKKASNSFYPIRFIKTTYPEYYDMRFAYGNVSIAKFLASSRSDRQLKKTSMYVNRHDWW VTSNEGSSDDGSGDSFGGGSFGGGGGTSSW >gi|237663591|gb|GG668927.1| GENE 84 80244 - 80552 518 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29375551|ref|NP_814705.1| 50S ribosomal protein L21 [Enterococcus faecalis V583] # 1 102 1 102 102 204 100 3e-51 MYAIIKTGGKQVKVEVGQAIYVEKLNVEAGEKVVFDEVILVGGESTKVGAPTVAGATVEG TVEKHGKQKKVVTFQYKPKKHSHRKQGHRQPYTKVMIEAINA >gi|237663591|gb|GG668927.1| GENE 85 80585 - 80929 564 114 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29375552|ref|NP_814706.1| hypothetical protein EF0969 [Enterococcus faecalis V583] # 1 114 1 114 114 221 100 1e-56 MIKGSFKRTGSGRIVSFELTGHAEAGPYGSDVVCAAVSALAISTVNGIDALAGFEPIVEV DDVEGGYLYVEMLTTVNQEQKNIAQILLENLLLGLQSIENENTEFIQIKTITEK >gi|237663591|gb|GG668927.1| GENE 86 80942 - 81229 485 95 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29375553|ref|NP_814707.1| 50S ribosomal protein L27 [Enterococcus faecalis V583] # 1 95 1 95 95 191 100 2e-47 MLLTMNLQLFAHKKGGGSTSNGRDSESKRLGAKSADGQTVTGGSILYRQRGTKIYPGVNV GIGGDDTLFAKVDGVVRFERKGRDKKQVSVYPVAN >gi|237663591|gb|GG668927.1| GENE 87 81466 - 81879 429 137 aa, chain + ## HITS:1 COG:YPO3717 KEGG:ns NR:ns ## COG: YPO3717 COG3223 # Protein_GI_number: 16123855 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 2 111 17 126 135 65 35.0 3e-11 MILDIVLGILGVFLLVFMASYLVDLATYLMKPMTPDNFSVIMQEIISFFMLFEFIMMILR YIQEGHHIPIRYLILICLTAILRQLMVAHGDGLQTLLLSLSILLLVVVLFILGLNGSKFY TLGKAKVEEDHEQDFHH >gi|237663591|gb|GG668927.1| GENE 88 81950 - 82765 671 271 aa, chain - ## HITS:1 COG:L42411 KEGG:ns NR:ns ## COG: L42411 COG1408 # Protein_GI_number: 15673582 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Lactococcus lactis # 5 267 10 276 278 186 38.0 3e-47 MNVYLFLALFFIIIGILSYSFFIEPNCLVIHKNQIKVTESGKTLRIVQLSDIHLKKNYSV KALKQIVEKTNTLQPDIVVFTGDLFDDYARFGIEIQDEVSQLFRKINAPYGKFAIYGNHE YSGLDTHFYETILEAADFTVLKNTGKLLPVSHRISLYVAGLEDSLYGQTDLAAALVNRPT GTPTLLLTHEPDVADSAVNKNIDLILAGHSHGGQIRLPFFTYKNQLAKKYTHGLYHLEDE TPLIVHPGIGTTKISARFGVLPTIELIELTI >gi|237663591|gb|GG668927.1| GENE 89 82937 - 84001 1584 354 aa, chain + ## HITS:1 COG:lin1391 KEGG:ns NR:ns ## COG: lin1391 COG0006 # Protein_GI_number: 16800459 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Listeria innocua # 2 354 1 353 353 428 58.0 1e-120 MMARVEKLRELMKENNLQGFLVTSPYNLRYLTNFTGTTGLAMITLDKAFFVTDFRYTEQA AEQATGFTIVKNTGHIFDEVADLAERLQLDNLAFEETQVSFADYSLLEEILPCELVPVMG LIEELREVKDEEEVAIIEKACAIADQGFAFVLEMIKPGMTEIEVANQLDFFMRSKGASGV SFETIVASGLRSAMPHGVASHKVIEKGELITLDFGCYYEGYVSDMTRTFAIGSIQPKLKE IYDIVLEAQLKVLAEAKPGLTGIQLDAIARDHIASYGYGDAFGHSTGHGIGLEIHEGPNV SFRADKQFVPGNVITDEPGIYLPGIGGVRIEDDLLITAEGNRVLTHAPKELIIL >gi|237663591|gb|GG668927.1| GENE 90 84015 - 84335 500 106 aa, chain + ## HITS:1 COG:BS_yvdC KEGG:ns NR:ns ## COG: BS_yvdC COG1694 # Protein_GI_number: 16080518 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Bacillus subtilis # 1 103 1 103 106 100 49.0 6e-22 MDIQEYQRFISEFYKKRNWYQYDPFIRSNFLTEEVGEVCRAIRTIEIGRDRPDETVLADE ENLENLTEELGDVLDNLFILADKYDISLEMIMQKHRTKLMERYPEE >gi|237663591|gb|GG668927.1| GENE 91 84668 - 85099 704 143 aa, chain + ## HITS:1 COG:SP0434 KEGG:ns NR:ns ## COG: SP0434 COG1302 # Protein_GI_number: 15900352 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 13 136 5 125 129 114 50.0 8e-26 MSEEKNLVINANDSLGEIVIAPEVIEVIIGIAASKVEGVYGMRGTFANNVNELLGRAAHG KGVYLRTEEEGLKVDIYCYLNYGVSVPKVALEMQDRVKQQVLFMTDIDLVEVNIHVVAVV PEKIPQPDLNELFPEDEDGEENE >gi|237663591|gb|GG668927.1| GENE 92 85092 - 85544 658 150 aa, chain + ## HITS:1 COG:SPy1818 KEGG:ns NR:ns ## COG: SPy1818 COG0781 # Protein_GI_number: 15675648 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Streptococcus pyogenes M1 GAS # 7 140 8 138 150 105 44.0 2e-23 MSKTELTRHEIREKALQALFPLDFNADLTKQDAIDYALAYDNREIVSEDGEDLVPTYLDL LVGGVCSRKAELDEVITNHLGNNWSMQRLAKIDIVILRLAIFEMLYVSDVPNIVALNEAV ELSKKYSDDRSRKFVNGVLSNVMKEIDSEA >gi|237663591|gb|GG668927.1| GENE 93 85648 - 86493 1161 281 aa, chain + ## HITS:1 COG:SP0825 KEGG:ns NR:ns ## COG: SP0825 COG0190 # Protein_GI_number: 15900713 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Streptococcus pneumoniae TIGR4 # 1 277 1 278 285 363 66.0 1e-100 MSTVINGRELADQMQAEIQKDVEKMTQQGIQPGLVVLLVGENPASQTYVRNKERAAAKIG ILSKVEKLPETISEEELLAEIDKYNQDSRFHGILVQLPLPKHIDEEKILLAIDPKKDVDG FHPMNLGRLFVGKPEMIPCTPYGIMKMFEAYDIDLTGKRAVVIGRSNIVGKPMAQLLLMK NATVTIAHSKTEHLAEVAKEADILVVAIGRGHFVTKEFVKPGAVVIDVGMNRNQEGKLIG DVAFDEVSEIASYITPVPKGVGPMTITMLMYQTVEAAKKQK >gi|237663591|gb|GG668927.1| GENE 94 86503 - 87849 1415 448 aa, chain + ## HITS:1 COG:L0254 KEGG:ns NR:ns ## COG: L0254 COG1570 # Protein_GI_number: 15672836 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Lactococcus lactis # 4 439 3 417 417 380 50.0 1e-105 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANAHQYFSLKDDHAKISAIM FKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKLG KEGLFEGPKQQLPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQAAD DIVRNIQRADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISSVGHETDVT IADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTERFQRLQNSY VFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKGQLRESQQQ LAFLQRNLQTQMTQLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKEDRVVKTVTELQ PADQLTIHYADGTVQANVETITAKKEEF >gi|237663591|gb|GG668927.1| GENE 95 87851 - 88081 471 76 aa, chain + ## HITS:1 COG:no KEGG:EF0980 NR:ns ## KEGG: EF0980 # Name: xseB # Def: exodeoxyribonuclease VII, small subunit # Organism: E.faecalis # Pathway: Mismatch repair [PATH:efa03430] # 1 65 1 65 76 78 98.0 8e-14 MPAKEKTFEESLNALEEIVQRLERGDVPLEEALVAFQEGMALSKQCQDTLEKAEKTLTKM MTENNEEIVFEESEEA >gi|237663591|gb|GG668927.1| GENE 96 88081 - 88962 1117 293 aa, chain + ## HITS:1 COG:BS_yqiD KEGG:ns NR:ns ## COG: BS_yqiD COG0142 # Protein_GI_number: 16079484 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Bacillus subtilis # 1 265 1 271 272 220 50.0 2e-57 MTNFSQQHLPLVEKVMVDFIAEYTENERLKEAMLYSIHAGGKRLRPLLVLTTVAAFQKEM ETQDYQVAASLEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDGLLTGAF QLLSLSQLGLSEKVLLMQQLAKAAGNQGMVAGQMGDIEGEKVSLTLEELAAVHEKKTGAL IEFALIAGGVLANQTEEVIGLLTQFAHHYGLAFQIRDDLLDATSTEADLGKKVGRDEALN KSTYPALLGIAGAKDALTHQLAEGSAVLEKIKANVPNFSEEHLANLLTQLQLR >gi|237663591|gb|GG668927.1| GENE 97 88976 - 89791 877 271 aa, chain + ## HITS:1 COG:lin1403 KEGG:ns NR:ns ## COG: lin1403 COG1189 # Protein_GI_number: 16800471 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Listeria innocua # 1 269 3 272 274 353 66.0 1e-97 MKKERVDVLAFNQGLFETREKAKRSVMAGLVYNDKNERLDKPGEKISVETPLHTKGQVMP YVSRGGLKLEKALNVFAINVQGKTMLDIGSSTGGFTDVALQNGARLSYALDVGYNQLAWK IRQDERVVVMERTNFRYSKPEDFTEGVPDIATIDVSFISLRLILPPLHDILKKGGSVVAL IKPQFEAGKEFVGKKGIVRDPETHQMVVEEITRFAMNNGYDVKNLDFSPITGGEGNIEFL AHLVSVDGEGSYQATESIEEVVAHAHQKLVE >gi|237663591|gb|GG668927.1| GENE 98 89930 - 90379 469 149 aa, chain + ## HITS:1 COG:BS_ahrC KEGG:ns NR:ns ## COG: BS_ahrC COG1438 # Protein_GI_number: 16079481 # Func_class: K Transcription # Function: Arginine repressor # Organism: Bacillus subtilis # 1 149 1 149 149 117 40.0 6e-27 MRKQDRHRLITRLLTEKNIQKQEDFVNYLQEKGVAVTQATISRDIKDMKLIKVPSAEGGY RYSLPLETQANTSAKLAKLLKDAFVAAEQMEKYVVLRTIPGNAAACGSLIEKNYQEKLFA VINDDDSVLMIARTEEAAEKLHKELLSYL >gi|237663591|gb|GG668927.1| GENE 99 90397 - 92070 1859 557 aa, chain + ## HITS:1 COG:lin1405 KEGG:ns NR:ns ## COG: lin1405 COG0497 # Protein_GI_number: 16800473 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Listeria innocua # 1 557 1 558 563 484 49.0 1e-136 MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGAN KCTLEGLFSMPKSQELKQLLEELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKR IGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLTVKEKYTRAYQEYRALEAKVRKRQ KNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE DDSSLDKIGTSMNELASIESLDPEYKTLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRL NEVENRLELIRQMKRKYGDSIETILSYYEEITKELAEADFLEGGTGDLEALLAEKQQAAH QQALVLRKERKRLAKELEQQILTELKELYLERTEFEVRFTELEHLQENGLDGVEFYITTN PGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEI TKLTIEHAQELLAMAKK >gi|237663591|gb|GG668927.1| GENE 100 92161 - 92271 158 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNDKEQSRFSKITKVVVWLMLIAIVGSTVLTAILSL >gi|237663591|gb|GG668927.1| GENE 101 92339 - 93295 872 318 aa, chain - ## HITS:1 COG:lin0651 KEGG:ns NR:ns ## COG: lin0651 COG0598 # Protein_GI_number: 16799726 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Listeria innocua # 1 294 1 292 316 182 36.0 6e-46 MINYLLLKNDYFEPCSPDDEALSWISVESPTEEEIERLVNQYHLPTDYLTGVLDDEENAR VEGFRHEKLQTPTLLLFRYPKASISPSGYLQVETVPIALIATVDNKLITVSNGPNDIVHG IQKEAFTHQDLSIEKALILALSWKMALSFNKNLQALIQQTNKLEGELQVATENSQLYQIM DIQKSLVYFEAALTDNLKVLKRLYSAEIFNHPEKHLPFLRDILIELEQGLNTTKIQLKLV DNISNTFSAIVSNNLNNVMKILTSLTIVLTIPTIIGGIYGMNVKLPFAEHEYSFWIIFAI TTLICVISIRILKKKNLL >gi|237663591|gb|GG668927.1| GENE 102 93570 - 93941 203 123 aa, chain + ## HITS:1 COG:no KEGG:EF0987 NR:ns ## KEGG: EF0987 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 123 8 130 130 170 100.0 1e-41 MVSFSAIMLFWYIFPVIVLFACNFLVSTFSLTERWKIKAPDLAIPFLFIGIHELSKDSYD ESIMPYFVISILLLGVAVALFQAYYYGEILYRRYFKMFWRLTFLLTFVLYVLLILLNISH YLL >gi|237663591|gb|GG668927.1| GENE 103 93973 - 94038 109 21 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGKCPPQLPTPWGFFVILGVI >gi|237663591|gb|GG668927.1| GENE 104 94178 - 94660 483 160 aa, chain + ## HITS:1 COG:BS_yllB KEGG:ns NR:ns ## COG: BS_yllB COG2001 # Protein_GI_number: 16078577 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 18 158 1 141 143 206 65.0 1e-53 MGCGRLVLSSGKAGVLAMLMGEYQHNIDAKGRLIVPSKFREELGEKFVVTRGMDGCLFGY PLNEWSQLEAKLQEMPLAKKDARTFVRFFYSAATECEIDKQGRINIPANLRTHASLEKGC VVIGVSNRIEIWSDERWHAFSDEAEENFDELAETMIDFGF >gi|237663591|gb|GG668927.1| GENE 105 94675 - 95631 1015 318 aa, chain + ## HITS:1 COG:lin2147 KEGG:ns NR:ns ## COG: lin2147 COG0275 # Protein_GI_number: 16801213 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Listeria innocua # 5 315 2 310 312 442 72.0 1e-124 MTEEFRHYTVLLKETVDGLQVKPDGVYVDCTLGGAGHSEYLLTQLNEHGHLYAFDQDQKA LAHAKTRLQKYVDKGQVTFIKSNFRNIKEELAEHGVFHVDGILYDLGVSSPQLDEAERGF SYHQDAPLDMRMDQDAPLTAREVVNTYSYGELVKIFFRYGEEKFSKQIAREIERVREKQP IETTGELVEIIKTAIPAPARRKGGHPAKRIFQAIRIAVNDELGAVEESLEQAIDLLAKNG RISVITFHSLEDRIVKTMFKEYSTVQDLPPGIPVVPEEFQPELKVITRKPILPSDSELSE NNRSRSAKLRIAEKIKSS >gi|237663591|gb|GG668927.1| GENE 106 95648 - 96055 524 135 aa, chain + ## HITS:1 COG:no KEGG:EF0990 NR:ns ## KEGG: EF0990 # Name: not_defined # Def: cell division protein # Organism: E.faecalis # Pathway: not_defined # 1 135 1 135 135 206 100.0 2e-52 MAELKKVNDFHYEAPEMDQPTVATEQDRKMQEETLPVPTLLPKKKLKNVSLLEKLIGVVL VCATIGIAIATIQVRTTIVQTMNDITETQAVIKEKEDNALKLEQERSELSKSDRIKDVAK KQGLENNGDNVRTVK >gi|237663591|gb|GG668927.1| GENE 107 96055 - 98283 2406 742 aa, chain + ## HITS:1 COG:SP0336 KEGG:ns NR:ns ## COG: SP0336 COG0768 # Protein_GI_number: 15900267 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Streptococcus pneumoniae TIGR4 # 9 738 9 748 750 498 38.0 1e-140 MSKRHKFKQFMKKKNLNPMNNRKKVGIILFATSIGLFFLFAFRTTYIVATGKVAGVSLKE KTASLYEGSQVVKAKRGSILDRYGNPIAEDATSYSLYVVLSKKYTGQNNEKLYAEKKDFD DIAEILAKYTKLDKKTALKYLNNGIHEDGSTQYQVEFGAGGQNITLETRQKIEADLKKKK ISGVYFNEHPARLYPNGQFASHFIGYTKAANPDDDKEGLVGAMGLEQTYNDILSGTDGRV YFEKDIYGNALPGTVAEEKKAVDGQDIYTTLDSRLQNTLEDLMTQVNEKYEPVSMTAMLM EAKTGEIVAMSQRPTFNPETKQGLDDNGTWQNLLVESPYEPGSTIKLFTTAASMEQGQFN PNELFNRVGGIQVGDVTVNDHDYTRLNGKEYLNYRQAISWSSNIGMVKLEQKMGDEKWME YLKKFGFGTSTHSGLSGESAGKLPGTNFVDRAMSAFGQAITVTNFQMMKGFSAIANDGSM LQPHYISKIVDKNTGKETITEPQIVGTPIKAQTAQQIRTYMIDTVEDPTYGIAYDIYKVP GYHVAAKTGTAQISDGKGYVDGASQVLSSVVEMVPADNPEYVLYITLRQAKSGSPSEAMA AIANPLMKLALDIKETDPETTKVASDKVTVADYKNMTPAEALANAKVNGVDPVIIGDGEK IKKQSTPSGQTLMPNQKLILITNGTNYMPDLTGWSKSDVTKFGDLLGLTVEFKGEGYVTK QSIAAETEITEKKLTVTLEGTE >gi|237663591|gb|GG668927.1| GENE 108 98310 - 99275 987 321 aa, chain + ## HITS:1 COG:SP0337 KEGG:ns NR:ns ## COG: SP0337 COG0472 # Protein_GI_number: 15900268 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Streptococcus pneumoniae TIGR4 # 11 321 9 324 326 296 55.0 5e-80 MEWTQIFIPIVVSFAITVSVMPLFIGYFQMKKQGQVTREDGPTWHSVKTGTPTMGGVVFL VASLITSLAMGLFFHQFTPSLLIILFILVLYGLLGYLDDFIKVFKKRNMGLNSRQKLIGQ IFGGLVFYFVYRSEGFSDTLDLFGLAEVPLGIFYGVFIIFWLVGFSNAVNLTDGIDGLVA GLGTISFGTYAIIAWKQQQFDVVIICLSVIGGLIGFFPYNRKPAKIFMGDVGSLALGGLL AAISIILHQEWTLLLIGLVYVCETASVILQVASFKLFGRRIFKMSPIHHHFEMCGWSEWK IDFVFWSVGLICSGITLWILF >gi|237663591|gb|GG668927.1| GENE 109 99298 - 100668 1341 456 aa, chain + ## HITS:1 COG:SP0688 KEGG:ns NR:ns ## COG: SP0688 COG0771 # Protein_GI_number: 15900589 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Streptococcus pneumoniae TIGR4 # 1 453 1 450 450 537 60.0 1e-152 MKKITTYQNKKVLVLGLAKSGVSAAKLLHELGALVTVNDAKQFDQNPDAQDLLTLGIRVV TGGHPIELLDEEFELIVKNPGIPYTNPLVAEALTRKIPIITEVELAGQIAECPIVGITGT NGKTTTTTMIGLLLNADRTAGEARLAGNIGFPASTVAQEATAKDDLVMELSSFQLMGIET FHPQIAVITNIFEAHLDYHGSRKEYVAAKWSIQKNMTAEDTLILNWNQVELQTLAKTTAA NVLPFSTKEAVEGAYLLDGKLYFNEEYIMPADELGIPGSHNIENALAAICVAKLKNVSNA QIRQTLTNFSGVPHRTQFVGEVQQRRFYNDSKATNILATEMALSGFDNQKLLLLAGGLDR GNSFDELVPALQGLKAIVLFGETKEKLAEAAKKANIETILFAENVQTAVTIAFDYSEKDD TILLSPACASWDQYPNFEVRGEAFMQAVQQLKESEM >gi|237663591|gb|GG668927.1| GENE 110 100673 - 101764 1232 363 aa, chain + ## HITS:1 COG:BH2565 KEGG:ns NR:ns ## COG: BH2565 COG0707 # Protein_GI_number: 15615128 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Bacillus halodurans # 1 360 1 359 363 385 53.0 1e-107 MKILVTGGGTGGHIYPALSFVEHVKKEAPATEFLYVGTENGLESQIVPKAKIPFKTIKIQ GFKRSLSPQNFKTIYLFLTSINKAKKIIREFQPDVVIGTGGYVSGAVVYAAHQLKIPTII HEQNSIPGMTNKFLSRYVDKIAICFPDVASFFPKEKTILTGNPRGQEVVTVEKSAILSEF GLDPAKKTVVLFGGSRGALKINQAFEQAFPLFEEREYQVLYASGERYYQELQESLKLSEK KLTNISVQPYIDKMVEVMANTDLMVGRAGATSIAEFTALGLPAILIPSPYVTNDHQTKNA QSLVKVGAVEMIPDAELTGARLVAAIDDILLNNEKRQQMATASKGEGIPDASDRLYQVVK TLV >gi|237663591|gb|GG668927.1| GENE 111 101773 - 102897 960 374 aa, chain + ## HITS:1 COG:lin2140 KEGG:ns NR:ns ## COG: lin2140 COG1589 # Protein_GI_number: 16801206 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Listeria innocua # 87 327 12 252 270 150 35.0 4e-36 MWKISNENDIFKKRKPLPPKKSEESQPELTPWQKQNQEYLKKQAEEAASKGENEQAEVII TLQEQSQEEPQQHLPQETVEEEEHFADRLPNVKKTRNKRLYRRLAFILTCLGTAILVALY FVSPLSRLSEVTVSGNKSVESQAIIQQSKLETGSGLWEQYSNRNYFSANIQKKFPIIKKA NIKLNGINSFKIDIQEYQIVALAATKGGYHPILENGKTLAETTKAAESGKPIFENFKEDK LIPELMASYNKLPQEIKQGISEIKYAPSKTNKDLINVYMNDGNRVIVNISDLSEKMAYYS QVAEQMDKPGIVDMEVGIFSYPYEKESEETGSEVSEDSAVENQEVADPNAGVATDEANNG TPTNGENQEVQQAE >gi|237663591|gb|GG668927.1| GENE 112 103071 - 104393 1478 440 aa, chain + ## HITS:1 COG:L0207 KEGG:ns NR:ns ## COG: L0207 COG0849 # Protein_GI_number: 15673852 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Lactococcus lactis # 1 440 1 456 456 442 50.0 1e-124 MAKTGMYVGLDIGTTSVKVVVAEYIEGQMNIIGVGNAKSDGLNRGIVVDIDQTVQAIQRA VRQAEEKAGIQIKSVNVGLPANLLEVESCQGMIAVSSESKEITDEDVRNVASAALVRSTP PERQIVAILPQDFTVDGFEGIKDPRGMLGVRMEMFGVVYTGPKTIIHNIRKCVEKAGLGI NELVITPLALTETILTDGEKDFGTIVIDMGGGQTTTSVIHDKQLKFTHVNQEGGEFITKD ISIVLNTSFNNAEALKINYGDAYPERTSANEEFPVDVIGKSEPVRVDERYLSEIIEARVE QILRKSKEVLDEIDAFELPGGVVLTGGAASMPGIVDLAQEIFEANVKLYVPNHMGLRNPV FANVISIVEYSAQLNDIYHIAKYAIPGEKSKPAQSVAVQQEVRYDTYAEQPQEEYEEFNE RESGEKVTGKIKDFFSNIFD >gi|237663591|gb|GG668927.1| GENE 113 104420 - 105652 1623 410 aa, chain + ## HITS:1 COG:L0208 KEGG:ns NR:ns ## COG: L0208 COG0206 # Protein_GI_number: 15673851 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Lactococcus lactis # 1 408 1 416 417 437 65.0 1e-122 MEFSLDNNINNGAVIKVIGVGGGGGNAVNRMIEENVKGVEFITANTDVQALKHSKAETVI QLGPKYTRGLGAGSQPEVGQKAAEESEQVISESLQGADMIFITAGMGGGTGTGAAPVVAK IAKELGALTVGVVTRPFSFEGPKRGRFAAEGIALLKENVDTLLIISNNRLLEVVDKKTPM LEAFREADNVLRQGVQGISDLITAPGYVNLDFADVKTVMENQGTALMGIGVASGEERVIE ATKKAISSPLLETSIDGAEQVLLNITGGLDMTLFEAQDASDIVTNAASGDVNIILGTSIN EDLGDEIRVTVIATGIDESKKDRKPHRQTRQAVQPMQQTTQSVEMDQPKSQEEASAFGDW DIRREQNTRPKVDESSLEQVDKKEFDTFHREEPNHNDDELSTPPFFRRKR >gi|237663591|gb|GG668927.1| GENE 114 105669 - 106346 555 225 aa, chain + ## HITS:1 COG:lin2137 KEGG:ns NR:ns ## COG: lin2137 COG0325 # Protein_GI_number: 16801203 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Listeria innocua # 5 224 6 224 229 232 54.0 4e-61 MIAENLTNINNQLQLACKSSQRSVADVTMIGVTKSVGIEEAAELVQLGVQNLAENRVDKL LEKKAGLEKFNDIQWHLIGNLQRRKVKLIINEIDYFHALDSLSLAKEIQKRATKVIRCFV EVNITGEESKHGFRKEDVLPFIQELADLDKIQIVGLMTMAPFGASEEVLHATFRELKELQ MTVNEKHLSFAPCTELSMGMSNDFPIAVEEGATFIRIGTALFRDA >gi|237663591|gb|GG668927.1| GENE 115 106360 - 107004 707 214 aa, chain + ## HITS:1 COG:lin2136 KEGG:ns NR:ns ## COG: lin2136 COG1799 # Protein_GI_number: 16801202 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 124 211 64 151 152 92 51.0 7e-19 MSIFNKDALSSFFGLSGEEDDYYDNYEEYEERKAVNEPPRRAARPKPQRPVQQQESYSQP AYTQQSEPVVEKPSARYRSAEAHQERDTQQAAYTEKKVVSMRSSNQSATTNTRRAQESTA NAKTHKITIIEPRVYSEAMSIAKHLFAEEAVLVNFTLVEEDQARRIVDFLTGTVYALDGD IQRVGNEIFLCTPANMEIDSATAQSLANKQFFDF >gi|237663591|gb|GG668927.1| GENE 116 107081 - 107290 144 69 aa, chain + ## HITS:1 COG:no KEGG:EF1000 NR:ns ## KEGG: EF1000 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 69 1 69 69 112 100.0 7e-24 MIYALLSWFPGAYDSAFGRLLSRICEPYLSLFDRLNLRIGMVGFNVMVGIIVLNLAAGGL AVILRAIVY >gi|237663591|gb|GG668927.1| GENE 117 107317 - 108099 1342 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29375583|ref|NP_814737.1| S4 domain-containing protein [Enterococcus faecalis V583] # 1 260 1 260 260 521 100 1e-147 MNANVYQHFRKDEHPFIDTVGDWLEQVEMQYAPYLTDFLDPRQAYILETLIRQNSDLSFT FYGGYEQAERKRCLIYPAYYIPEETDFGVVLFEIIYPSKFATLSHGKILGTLMNVGVRRE AFGDIISDGDKWQVFIAQEVAGFVVNQVDKIGKITVRLEERDYTQILIPKDGWQEERTTM SSLRLDSVISAVFNISRQRSKQLIESGKVKVNWTETTRPDFALDLLDIVSIRGFGRLQIQ ELEGKTKKEKFRVLLGVLRK >gi|237663591|gb|GG668927.1| GENE 118 108110 - 108199 60 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFKKTILAVHSDEVVYNKKSKIFAISGLV >gi|237663591|gb|GG668927.1| GENE 119 108251 - 108952 895 233 aa, chain + ## HITS:1 COG:SP1661 KEGG:ns NR:ns ## COG: SP1661 COG3599 # Protein_GI_number: 15901496 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division initiation protein # Organism: Streptococcus pneumoniae TIGR4 # 1 194 1 183 262 124 43.0 1e-28 MALTPLDIQNKDFSTKMRGYNQDDVDDFLDQVTRDYEDALQKNRELEKSLKHAEEKLQYF NELKDALNQSIIVAQDTADKVKSSANKESEMIITSADNQAKETLVEAERKSNAMIADAEA KSTQILAEAIERARQLAGETEDLKKKTRVFHQRLSLMLETQLEQVKSEEWEEILKPFSSY VGDKHTAVKEILDEQDLDNENETVVNSEENTDAVVEKKPVIEVTEETIEEESK >gi|237663591|gb|GG668927.1| GENE 120 109263 - 110852 1982 529 aa, chain + ## HITS:1 COG:L0350 KEGG:ns NR:ns ## COG: L0350 COG0060 # Protein_GI_number: 15673845 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Lactococcus lactis # 1 529 1 529 932 834 72.0 0 MKMKETLQLGKTAFPMRGNLPNREAEWQKDWEEKGLYEQRQKLNEGKPTFVLHDGPPYAN GNIHLGHSLNKISKDIIIRSKSMSGFRSPYVPGWDTHGLPIEQVLTNKGVKRKEMTVAEY REKCKEYALSQVDKQRNDFKRLGVSGDWEHPYITLDPEYEAAEIRVFGKMAEKGYIYKGL KPIYWSPSSESSLAEAEIEYKDVKSPSIYVAFNVVDGKGLLDNETAFVIWTTTPWTLPAN LGISVNPDFTYVEVKADGRKFVIAKDLLSTVKEAIGWEEVEVLREFSGEKLDRMTAQHPF YDRTSLVMLGDHVTLDAGTGLVHTAPGHGEDDYIVSRKYDLPVISPVDSRGVFTDEAPGF EGIFYDKANPMITELLEEKGALLKLDFFTHSYPHDWRTKKPVIYRATPQWFASISKFRQD ILDEVEKVDWLIPWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAENGEAIITPETIEH VANLFAEHGSNIWFMREAKELLPAGFTHPGSPNGEFTKETDIMDVWLAS >gi|237663591|gb|GG668927.1| GENE 121 111083 - 112297 1381 404 aa, chain + ## HITS:1 COG:SP1659 KEGG:ns NR:ns ## COG: SP1659 COG0060 # Protein_GI_number: 15901494 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 404 525 928 930 537 64.0 1e-152 MDVWFDSGSSHEGVLREREELTFPADMYLEGSDQYRGWFNSSITTSVAINGVAPYKSIIS QGMVLDGEGRKMSKSLGNTILPEKVINQMGADILRLWVSSVDAEADVRVSMDILNQVSEV YRKIRNTMRFLLANTSDFNPAEHTVAYADLRSVDKYMTVRLNQVIQEIRENGYEKYNFMH IYRTVMNFLTVDLSSFYLDFAKDVVYIEAENDYQRRCMQTVFYQTLVSLTKLLTPIIPHT AEEIWSFLQEEEEYVQLAEFPGYETFTNEEELMDTWAAFMDFRDNVLKALEEARHSKLIG KSLEAKVTVYPNEQIRQLMTAVDADISQLLIVSDFEVSKEVAPSEAVQFEDMAILVEKAE GETCDRCRSVRQDVGSDEKLPTLCGRCAHIVEENYPEAVAEGFE >gi|237663591|gb|GG668927.1| GENE 122 112349 - 113872 1612 507 aa, chain - ## HITS:1 COG:L0044 KEGG:ns NR:ns ## COG: L0044 COG0364 # Protein_GI_number: 15674202 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Lactococcus lactis # 3 507 4 503 503 666 64.0 0 MNEKVALFTIFGGTGDLAKRKLYPSLFRLYKKGLLAERFAVIGTARREWTDEYYREIVRE TIQDLNPTAEEATEFSSHFYYQSHNVNDTEHYNTLKELSDRLNGQYHLEGNHVYYLAMAP QFFGTIVNHLKSQHIISEEGFDRLIIEKPFGSDYESAYELNEEIRAAFPEQDIFRIDHYL GKEMIQNISAIRFANNIFESQWNNRYIDNVQITFAESLGVEDRGGYYDHSGALKDMVQNH ILQVVALLSMEPPVAFSEKEIRTEKVKALRAIRLYSEEEALQNFVRGQYGEGQLADQTFA AYRDEPNVAETSSTETFVAGKFLIDNFRWSGVPFYVRTGKRLTEKGTRINIVFKQVPINV FKDDTCEECDKTDLPPNVLTIYIQPTEGFSLTLNGKEIGQGFNTTPVKLDFRQSAEMTEN SPEAYEKLLLDCLNGDSTNFSHWDEVAQSWRIVDIIRHAWDKTDVSFPNYAAGTMGPQAA FDLLEKDGFTWEWQPDNWYRDRGQLDQ >gi|237663591|gb|GG668927.1| GENE 123 113872 - 114540 857 222 aa, chain - ## HITS:1 COG:SPy0450 KEGG:ns NR:ns ## COG: SPy0450 COG1321 # Protein_GI_number: 15674572 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 215 1 215 215 160 40.0 2e-39 MTPNREDYLKLIFELGGDEVKVNNKQIVSGLDVSAASVSEMISKLVKEDLVEHSPYQGVQ LTEKGLKKASTLIRKHRIWEVFLVEHLNYTWNDVHEEAEVLEHVTSQTLVNRLADYLNHP EFCPHGGVIPEDNQPIHEEKRQTLTDYPVGTKIRIARVLDEKELLDYLVSIDLNIQEEYT IKEIATYEGPITIYNENKELSVSFKAANTIFVEPLIRESEEN >gi|237663591|gb|GG668927.1| GENE 124 114712 - 115080 304 122 aa, chain - ## HITS:1 COG:no KEGG:EF1006 NR:ns ## KEGG: EF1006 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 122 1 122 122 243 100.0 1e-63 MKKHWTFLVGASLLTGLAGSILWKKNKQLPSPQELQHNYTGHWWFVDVKKATQHTLEITS SFNVFIDGKQTHALLVELTPKRLVILDKLGYHLIIQCENGVPATLYDEADDETYTLERAI YN >gi|237663591|gb|GG668927.1| GENE 125 115279 - 116010 717 243 aa, chain + ## HITS:1 COG:CAC0144 KEGG:ns NR:ns ## COG: CAC0144 COG1489 # Protein_GI_number: 15893439 # Func_class: R General function prediction only # Function: DNA-binding protein, stimulates sugar fermentation # Organism: Clostridium acetobutylicum # 1 230 1 226 230 191 45.0 8e-49 MKYPNVQLAYFIERPNRFIAHCRLMETNEEVITHVKNTGRGKEVFLPGAVVALSYQPSPK RKTDYDLIAVKKGSFWINIDSQVPNTLVNEALKNGQIVLPGLVGTIQTVKREQLFAHSKF DFLVETDADEQAFVEVKGMTLENKGIGAFPDAPTLRGLKHVTELMAATKAGYRCYILFVV QFEEIKQATIHQEMQPAFAENVGAAIDQGVQVLAYNCHVTPATIELKSQVTFDLLQAFDD PNK >gi|237663591|gb|GG668927.1| GENE 126 116116 - 117114 1342 332 aa, chain + ## HITS:1 COG:lin1837 KEGG:ns NR:ns ## COG: lin1837 COG0673 # Protein_GI_number: 16800904 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Listeria innocua # 2 332 1 327 327 283 46.0 3e-76 MIHLGVIGTNWISHQFVAAALETGAYDLTAVYSRKLATAQEFGSRYGDVEYAIDLETFFG IAHMDTVYIASPNSLHFEQAKQAILAKKNVIVEKPAFSTPDEMAEIIELANKNRVYFFEA ARNIHEQSFQKIAELLPLKNQILGANFTYMKYSSRYDQVLEGKEPNIFSPHFSGGALADL GVYLVYAALGWFGVPKESHYFASKIATGVDGLGTIILRYDQFDVTLNTGKISDSFAPSEI YFENGTLILDSVNAISSAEYHDRAHEERDVLDIQVADNPMIEEARDFAAVLNNPTDKYWG TKYEEWVELARNVNKVVTDLRHSAGIIFDADK >gi|237663591|gb|GG668927.1| GENE 127 117141 - 118442 1291 433 aa, chain + ## HITS:1 COG:SPy1369 KEGG:ns NR:ns ## COG: SPy1369 COG0513 # Protein_GI_number: 15675301 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Streptococcus pyogenes M1 GAS # 4 369 2 358 361 293 43.0 5e-79 MRFLEQLPEAWQEQWQASGFNEPSTIQEKSFTPLREGENVLGISPTGTGKTLAYMLPLLL TVEKGQGNQLLIIAPSQELAMQIAEVARTWAKPLQLTVQTLIGGANVSRQIDKLKKRPEV LIGTPGRILELMKNKKVKAQLLKTIVMDEVDQLFQEEELSLTKQILTHTPTEYQLVFYSA TADRVVNQAQSLSQKLQVIDVTEEDTSAGQVAHYFIRLAPRKKADYLRRLAHTEAFRSMV FFNQVADLGAAEEKLVYENVPAIGLASDQSKQLRKLAIDQFKAERVKLLLTTDIAARGLD FTGVPYVVNVDVPLTEESYIHRSGRVGRMGAQGAVITFINDGTKRDYQRLMKQLAIPYQE IFLYDGALHEQPKAKDELEKKNVVKDTSSEKKSTKERKPETVNSVVKEPQETRKKKKNKK KNTKNKGARKAKK >gi|237663591|gb|GG668927.1| GENE 128 118487 - 121192 2647 901 aa, chain + ## HITS:1 COG:lin1832_1 KEGG:ns NR:ns ## COG: lin1832_1 COG1221 # Protein_GI_number: 16800899 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Listeria innocua # 1 434 1 432 432 476 56.0 1e-133 MKSRKEEILALLQKNETGLTAGAVAEQLMIDRSNASRYLNELFKEKKITRSTGRPVIYSV PTINEGEQVHVDESTSVSFDTLVGANDSLKVSIQQAKAAILYPPRGLHTIIFGKTGTGKS LFAECMYRFAIDSKTLDEDAPFVSFNCADYAQNPQLLFGHIFGVKKGAYTGANEDSPGLM AKADGGILFLDEIHRLPPEGQEMLFTFIDKGVYRPLGESGQTYEASVQIIGATTESSENF LTTFNRRIPMSITLPSLDARTLDERYAIISLFIQQEATRLGQQIDIEREAVLAFMLYDAE GNIGQVKRDLKLVCAKSFLYYRTHNLEHLVIRKRDLSLPVQKGLLKIKEVPERLDQFVDS KSNYLSFQPGTNKIVWSQDPARDMQVYNEIEEKVADLSEADLENVDLEELISKDMNAYFK NYVEELTQHSLHKELLPEAIWDLTNRLYDIAEERLEHTYNETARFAFALHLQSTIERVKE GHVIVHPDLNNVRKNMKKEFQVALDLSSIIEEENNIEIPFDEIGFISMFLSINVGKEERT PENNVGVFVLMHGDSTASSMLKTAQELLGTSIGTAMNMPLTMEVQTMYEQLRNQVITQKE SLNNGILLLTDMGSLNSFGNMLFEETGIRTKAITMTSTMIVLEAIRMASVGRSLEDIYQN IQLSFESVVREQFRSSLQKRQNVKKAVIVTCFTGEGVAAKLYQRILPVIDETKVELIQMQ FIERETFKKHIDNLMEEYEIKAIAGTVDVEYQNIPFFSVYDIFDDEKLNVLKRIASDEVA IDTIVHSLSGVITSVDSLQKLILMLQKTVHQIQTDMHIIVEPGVDAGIMIHLAFLVDALI KGEEARTFPNLAEYVKTHRLEIDVVRTNFMLIERAYRVTIPEAEVAHVTQMFLENEIKSK Q >gi|237663591|gb|GG668927.1| GENE 129 121880 - 123343 1722 487 aa, chain + ## HITS:1 COG:lin2856 KEGG:ns NR:ns ## COG: lin2856 COG1455 # Protein_GI_number: 16801916 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 1 478 1 445 454 450 56.0 1e-126 MNGLMAWMEKYILPTAAKIGAQKHLVALRDAFIGTLPATMAGSVAVMINAIIRDLPQEFV STYAASLEADKGIFAVLNVIIGINGFVWNGTLAIAGLIFAFSWGYNLAKAYNVNELAGGI VSLATLISGVAFAPNNTAELAVKVPEKIANAINGAEIGASIANNQLTVNPWGWLNLNHLN GNAFFTVMIMGALSTIIFCKLMQADLTIKMPDSVPPAVSKAFAAILPATIALYVVAIINF TVSKLSGGQLLIDLIQKYIAEPFLGLSQGLGAVLIVTVFVQIFWFFGIHGPNVLAPVLEG IWGQAQLINIDIFQKGYEGKTGTAAVLAAIDDGKAYMWVRGSFDAFAWFGGSGGTIVLII AILLFSKRADYLTVGKLSLGPGIFNINEPIMFGLPVVLNPIMFIPFVIAPLVATTIGWVA TYLGLVAPVSQQVAWVTPPLLLSFLATGADWRAPIVALVCMVVTFLIWTPFVIAANKMDP ALGESEQ >gi|237663591|gb|GG668927.1| GENE 130 123387 - 123605 383 72 aa, chain + ## HITS:1 COG:no KEGG:EF1014 NR:ns ## KEGG: EF1014 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 72 1 72 72 120 100.0 2e-26 MISIASAMKQEEIITLLEAYQGENETFTFKEKNGIKLFFEVEGDPETAAQVAKQLIKEQP WGGVLYFQATVV >gi|237663591|gb|GG668927.1| GENE 131 123625 - 123819 190 64 aa, chain + ## HITS:1 COG:no KEGG:EF1015 NR:ns ## KEGG: EF1015 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 64 1 64 64 112 98.0 6e-24 MIRNGLFLCSIGFLIVLYSLNPSSLNYDLLSLTTGIFFIGLGGYLFFKGKKVAEEEATKD EVKR >gi|237663591|gb|GG668927.1| GENE 132 123819 - 124229 391 136 aa, chain + ## HITS:1 COG:no KEGG:EF1016 NR:ns ## KEGG: EF1016 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 136 1 136 136 211 100.0 5e-54 MEITKTLTISADEFYTQLMNSVIFDIRKQTGKTLTRKQLRKFEYIKEYSKNSRAKIVIEE AVENKTYQFRTSTTKNDFSVRYELQPIDEKSCELRYTETMVSYGALQKLNDAVLGIFLSY FKKKQFYKMLKMMETA >gi|237663591|gb|GG668927.1| GENE 133 124854 - 125174 465 106 aa, chain + ## HITS:1 COG:lin1830 KEGG:ns NR:ns ## COG: lin1830 COG1447 # Protein_GI_number: 16800897 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Listeria innocua # 8 101 5 98 100 102 62.0 2e-22 MDGQQNLEAIMGLIMYGGNAKSDAMEAIAAAKSGDFELADKKIADAEESLVHAHHSQTGM LTEEAKGNNMQVTLLTVHSQDHLMTAIAFTDLAKEIIDLYRRIDNE >gi|237663591|gb|GG668927.1| GENE 134 125240 - 126517 1504 425 aa, chain + ## HITS:1 COG:lin2832 KEGG:ns NR:ns ## COG: lin2832 COG1455 # Protein_GI_number: 16801892 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 1 425 1 430 435 522 67.0 1e-148 MDGFVQWMEKHFMPKASVIAAQRHLVAIRDAFVVTMPLMILGALAVLINNIPIPGYEDFL NKIFPMMYNDAPIWKSFGGNIWNGTFAIFAVLVAFLVAHNLVKSYGKDGIAAGTVSVASF FAVGGLEGMGATGLFIALIIALISGELFQRLSGNPKLVIKMPDGVPPAVAKSFAALLPAM ITISLFSLITSILFALGIDNIVISFYEAVQQPFMGLANSYPSALLLAFITPFLWFFGLHG ANMVDPLMQTINVPAIDANIKALEAGKAIPYIVNKPFFDSFVNLGGTGATLGLLIAIFIV GRRNKPYKVITNLSLAPGLFNINEPVMFGLPIVLNPIMFIPFILVPMVLVTVAYVATATG LVPAATFMPPWVTPPIIGGFLATKSIAGGVLAAVNLLISILIYMPFVKVATDQYLKQEAA AEAAE >gi|237663591|gb|GG668927.1| GENE 135 126601 - 127995 1724 464 aa, chain + ## HITS:1 COG:BS_ydhP KEGG:ns NR:ns ## COG: BS_ydhP COG2723 # Protein_GI_number: 16077651 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Bacillus subtilis # 2 464 6 465 465 642 65.0 0 MKYQFPENFWWGSAASGPQTEGVFEGDGKGQNIWDFWYQEAPEKFFQQVGPDKTSQFYKK YQEDIQLMKETGHNSFRTSIQWSRLIPDPTTGKVNQTAVDFYNQVIDDLLEHGIEPFMNL YHFDMPMVLQEKGSWESREVVDLYVDFAKTCFELFGDRVKKWFTHNEPIVPVEGGYLYGW HYPDKVNLKEGIQVLYHEALASAKAIAVYHSMNLSGEIGIILNLTPTYPRDEHNEADVNA AKFVDGFFNRSFLDPAVKGHFPEDMVAWAKANDLLPETTPEDLAIIAENTVDLLGVNYYQ PRRAKAKETPVETRPEGLLPEDFYDVYDMPGKKMNPYRGWEIYEKGIYDTLMNLKENYGN IRCYISENGMGVEGEERFVNEQGVIEDDYRIEFVQDHLKWVHQAIQEGSNVQGYHMWTCM DNWSWLNAYKNRYGFIAVDLDDDAKRTIKKSGRWFKEMTANNGF >gi|237663591|gb|GG668927.1| GENE 136 128053 - 129246 1262 397 aa, chain + ## HITS:1 COG:L174946 KEGG:ns NR:ns ## COG: L174946 COG4552 # Protein_GI_number: 15672154 # Func_class: R General function prediction only # Function: Predicted acetyltransferase involved in intracellular survival and related acetyltransferases # Organism: Lactococcus lactis # 15 347 9 347 350 170 35.0 5e-42 MTTKRVKKMGKEEMKEMFDLVIYAFNQEPTAERQERFEKLLSHTQSYGFLIDEQLTSQVM ATPFQVNFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLADLAKQKVALSYLAPFSYP FYRQYGYEQTFEQVEYTIKTEDWPRVKRVPGTIKRVSWADGKEVIKDVYLENQRAHSGGV IRETWWLDYTLNRASKPNNQAIYYSSEGKAEGYVIYRIAAGTFEIVEWNYLTNTAFKALA GFIGSHSGSVQSFHWINGFAGKDLNDLMPTPAASVKILPYMMARIVELQTFLEKYPFQSG EKETYSLEIEDSYGPWNEGIWTITIDEQGKATVTKGAVEKEGTAALKADIQTWTQLFLGY RSAETLSFYERLQGDATTAQRLGQRLVKGMPILEDYF >gi|237663591|gb|GG668927.1| GENE 137 129329 - 129448 174 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKTKQEKVARNNKIGQYIAIATGLYYLGKMILDRRQKK >gi|237663591|gb|GG668927.1| GENE 138 129674 - 130006 560 110 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29375603|ref|NP_814757.1| hypothetical protein EF1023 [Enterococcus faecalis V583] # 1 110 1 110 110 220 99 4e-56 MAITINIYYSGTNGRAREFAKEMIASGIVEAIRAEKGNSRYEYFFPMDDEETVLLIDSWT DQEALDKHHASPMMTRITELREKYDLHMKVERYVSDVTDPLTKDAAFIRK >gi|237663591|gb|GG668927.1| GENE 139 130120 - 132765 2685 881 aa, chain - ## HITS:1 COG:lin1981 KEGG:ns NR:ns ## COG: lin1981 COG0574 # Protein_GI_number: 16801047 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Listeria innocua # 1 857 1 860 879 931 55.0 0 MKKFIYSFNETHNEGKETLGGKGANLAEMTRLGLPIPQGFTITTRCCMDYLADATFFEEY LQSEILKAVKNLETETGKSFTADNEILLVSVRSGAAFSMPGMMDTILNLGLNDQRVKKFA TLTSPGFAFDCYRRLIQMFGDVVYHIPKELFDQQKERLEQELNKKITAFQEEDHFALIVR YQEVFEQHQVVFPQDPVAQLFEAIKAVFDSWNNQRAVVYRNLHHIAHDLGTAVNIQEMVF GNRGLDSGTGVVFTRNPVTGENQLFGEFLLNAQGEDVVAGIRTPEPIRRLRLTMPKVYQD FRHYAELLEYHYRDMQDIEFTIENEKLYILQTRNGKRTAAATVKIALDLAKENRITKQEA LLRVTPDTIDQLIHPVFDQEKRQHMERLAMGLPASPGAASGQIVFTAEKAKELTNLGKKV ILVRQETSPEDIEGMVVSEAIVTSRGGMTSHAAVVARGMGTCCVTGCESLTVNEETKQLH CGPQVILEGTIISVDGSTGEIYLGEIPTISADNNDDLQELLSWADAYADLTVRANAETTQ DLETAIRFGAAGIGLARTEHMFFGEERVLEMRRLILAESEKEAAYALEQLLHFQQEDFYQ MLKVVQDKPMVVRLLDPPMHEFLPHEKNDIQLLAKQLQRFPVTIAKQIERLQETNPMLGH RGCRLGVTQPQIYKMQVTALFTSAIRLVKEGITVYPEVMIPLIAEKEELLYLKRILKETI DGLFEEHKMTPFPYEIGTMIELPRACLIADQLAEEADFFSFGTNDLTQMTYGFSRDDIGK FINTYREKKIITQDPFQSLDQTGVGQLIQLAVEKARRTKPNMSIGVCGEVGGDPQSITFF QTLGLNYISCSPYRVPIAKLAAAQAKILTEPAVTEEQMVLL >gi|237663591|gb|GG668927.1| GENE 140 132935 - 133564 704 209 aa, chain + ## HITS:1 COG:SA1393 KEGG:ns NR:ns ## COG: SA1393 COG0517 # Protein_GI_number: 15927144 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Staphylococcus aureus N315 # 1 204 1 207 207 160 42.0 1e-39 MKLSKRQEQIIAVVKEHQPVSGERISDILAVSRATLRSDLSFLTLSGILKASPKVGYTYE SDNMEAFFFFDVFQTKVQEIMSPPLMVAQDTSIRDAITNLFMYDVGSLYVMDEAKELLGV LSRKDLLRASLNTNIDGTPVAVCMTRVPHVKTCTPEFTILEAADTLQKYEVDSLPVVEKE NPKKVIGKITKTKILTYITQQAKEAAQNR >gi|237663591|gb|GG668927.1| GENE 141 133577 - 134389 981 270 aa, chain + ## HITS:1 COG:lin1980 KEGG:ns NR:ns ## COG: lin1980 COG1806 # Protein_GI_number: 16801046 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 264 1 264 270 223 44.0 2e-58 MKKEIIVYTISDSLGETSQKLLAAASAQYPDISFLNRYNFSFVTTEEELLEILKDALKDK ALVVSTLVSKQLITAAKEFSERTGLLYLDLMAPFFELIQAKAGVDPIEEPGRRHQLDRAY FDKISAIEFAVKYDDGKNPQGFLNSDILLLGVSRTSKTPVSMYLANQGYRVSNLPLIPEV PLPPILEEMDPQKMIGLVCSPETLGQIRSSRLASLGLGNETSYTNVERIEQELAYAEEIF AKYGIPVIDVTAKSVEETAFLIKEKLDERN >gi|237663591|gb|GG668927.1| GENE 142 134460 - 136991 2479 843 aa, chain - ## HITS:1 COG:lin1803_2 KEGG:ns NR:ns ## COG: lin1803_2 COG2898 # Protein_GI_number: 16800871 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 249 837 1 585 613 488 42.0 1e-137 MKQIIHWIKTHTGLLKTLFVIAVSIIVVAQLLSIGKTISFEQLKQIFDEIPLWKLLLMMV IGLVSVTPMLNYDLTLNRILNLKVSKRELLESSWIVNTINNIGGFGGLVSMGLRSEFYGN KTEEKKILPALTHILLFVLSGLSIYSILCFFLVQFDPKMAYLQQYWIWLLGGGLYFPLLY LILHFQKNSSFGNLDAKNRLSLVVSSFLEWTGVLITFISIGYLLDVPIPLIDIVPLYVAA SIIGIASMIPGALGSFDVMMILGLSNLGVDREIIVLWLLLYRLFYYIIPFLIGCLFFTKH LSQKLDTHYRQLLKQITLEIAHKLEVVLLYFSGIMMVLLATIPEAFTQVHWLRDINPFRS HIIIQIPSIVLGFALLIMGRGIADRVKRAYYPTIILLIGAILYSFVVDFSMFSIFYLAIL LFIVIFSKSELYREQLVYSWEWMTIDGFIFGLLTLLYLVIGVYNLPNFPHHRHHFVEFFL FPSERIWLSGFIAILLVMSFNFLFVRYLQGKKHQVGEFPEDSILHNILTTYGGNIDSELV FLHDKQVFLYPKEEPTVFLQFNTINNKCVVMGNPSGNKEDFPAAIDAFLKETDRFGYVPV FYETNEDSVMLLHEYGYEFIKMGEEALVNLETFTMSGKKFKGTRAVFNKITKAGYSFDVL QPPFSAEQMHELKAISDSWLDNRKEKGFSLGFFDEAYLQRNPIAVVRNAEGEMVSFANII PSYTNEVGTIDLMRHHKEKAPSGSMDFLFIHLFEYMKTENIHYFNLGMAPLANVGQSRKS FIQERIAALIYEFGSEIYSFQGLREYKEKFASKWQPRYTLYSKSSWIVYVMIALLIVDQK NID >gi|237663591|gb|GG668927.1| GENE 143 136988 - 137722 587 244 aa, chain - ## HITS:1 COG:lin2547 KEGG:ns NR:ns ## COG: lin2547 COG0596 # Protein_GI_number: 16801609 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Listeria innocua # 10 240 5 233 239 101 28.0 1e-21 MAIEKYFQTIDGSQIFYQIFGKETNYPLVLLHGNGNDHTFFNYQISYFSKEYQVIAVDTR GHGRSTNTQSQLTFPLLAEDLAGIIQQEHLTKINLLGFSDGANIAMVFTHLYPDFVNKLV LNSGNVTMSGLKKYVTIATYFQYWFCRIGAFFSKKLRARLPIVALLFEDTGLTKQDLEHI PCPTLVITGSRDLIALSHSRAIADAIPAGKLVLVNKQGHLFAKNSPDIFNKTIEKFLKEM KVSK >gi|237663591|gb|GG668927.1| GENE 144 137899 - 138483 514 194 aa, chain + ## HITS:1 COG:no KEGG:EF1029 NR:ns ## KEGG: EF1029 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 194 1 194 194 342 98.0 7e-93 MSLIVLIGAQAVGKMTVGKALEKQLDAKLLFNHQTIDLFANYLGYTERAFQLSDSVRKEL FHAFVENPATNTTKNIIFTVVIAFDQEQDFQFLEEISEIFLSKHESVYFVELVSSTEIRL ERNVHPERLEAKPSKRDVDFSRKELLNTFKEHRLVSHEGELESTFPNVKITKINNSNMTP EEVATKIIATFGLT >gi|237663591|gb|GG668927.1| GENE 145 138506 - 139561 981 351 aa, chain + ## HITS:1 COG:no KEGG:EF1030 NR:ns ## KEGG: EF1030 # Name: not_defined # Def: endonuclease/exonuclease/phosphatase family protein # Organism: E.faecalis # Pathway: not_defined # 1 351 1 351 351 673 99.0 0 MKKFFKYLGSLMVLLLSIALILIGYLTFREFRPRAVEPVAINKQISEQTIEKKQSISLVT YNIGYAGLGQTEDFFMDGGKTVQPVNKAMVQQNLTGIEETLKELPAMIYLFQEVDRRSQR SYEVNQEEELQKQLQLNSAFAYNFKVDYVPIPWPPIGRVESGLLTLSNEKITEAKRIALP NPFRWPVSISNLKRALLETRFPIKGTDKELVVFNLHLEAYDNGEGKIAQSKKLADVLSQE YAKGNYVIAGGDFNQVFKGSHRYPDLGEAGWVPGEIDPADLPKHFSLAYDDQQPTVRVLN KPYTGSYETSQVYVIDGFIVSDNVAVHSVKTKDEQFKYTDHQPVKMEVGLK >gi|237663591|gb|GG668927.1| GENE 146 139578 - 140045 395 155 aa, chain + ## HITS:1 COG:Cj0117 KEGG:ns NR:ns ## COG: Cj0117 COG0775 # Protein_GI_number: 15791505 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Campylobacter jejuni # 1 155 2 164 229 71 25.0 5e-13 MKLGVIAAMDLELQKLLEYFPPQRKIQLAKNTFYIYEQKTSQVIMVCAGQGKTNATLYSQ ILIDSFQIEQLINIGICGCLNEKLQLFEMVLGEEYCHYDIRERQSINKFPYQLYYKGDKG MLAELQHLDEKIKCVRFGTGEGFVCDTTEKRNLIE >gi|237663591|gb|GG668927.1| GENE 147 140061 - 140234 68 57 aa, chain + ## HITS:1 COG:no KEGG:EF1031 NR:ns ## KEGG: EF1031 # Name: not_defined # Def: phosphorylase family protein # Organism: E.faecalis # Pathway: not_defined # 1 57 162 218 218 106 98.0 3e-22 MDMESAAIAQCCFLNDCAFVSIRIICDRADANAVKVTEDTQTQAMEKVFELVCAYIN >gi|237663591|gb|GG668927.1| GENE 148 140338 - 142575 1394 745 aa, chain - ## HITS:1 COG:CAC1464 KEGG:ns NR:ns ## COG: CAC1464 COG0178 # Protein_GI_number: 15894743 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Clostridium acetobutylicum # 2 745 8 750 755 798 51.0 0 MEWIEIKHATQNNLKNVSVNIPKKQLTVVTGLSGSGKSSLVFDTLAAESRRELNDTFSSF VQNYLPKYGRPEVEKIENLPVAIVIDQKKVAGNSRSTVGTYTDIYTFLRLLFSRAGSPFV GYSDTFSFNHPDGKCPTCDGLGKITEINLHQLVDYDKSLNEGPIDFPTFTVGNWRWKRYA HSGLFDLDKKIKDYSPEELALFLYAPQQKLANPPKEWPHTALYEGIVPRMQRSILHTDEG KRHQKYLNHFVTVKRCPDCLGSRVNERVRSCKINQKSIADAVDMPLTELHSFIRSMDLSL IKNIQEELLVRLEALINIGLSYLTLGRATETLSGGEAQRIKIAKYVNSALNDIMYILDEP SAGLHPKDIERISRALLNLKNKGNTVVLVEHNPQLIREADFIIDIGPFAGENGGHVQFSG TYDAFLASKTLTSQALQEPLPLNDQPRKARKSLTIEHATLHNLNNLSVEVPLGVLTVICG VAGSGKSSLAEEIYQKAQADNQEIIHLSQKSITANLRSTPMTYLNIFDKVRKLFAEENHV SPALFSYNSKGACPTCKGKGIIVSDMSFMEDVTSICETCHGTRYKEEVLHYLYNGKNIVE VLALSVKDGYDFFKDQPFALSLKNLLEVGLSYLKLNQSLSTLSGGELQRVKLADTLHQKK AIYLMDEPTDGLHLIDIQQSLQLFNRMVEEGNSLILLEHHIDVIKSADWLIELGPEGGEN GGQLLFTGTPANMLNSTHSITKGYL >gi|237663591|gb|GG668927.1| GENE 149 142737 - 144614 2046 625 aa, chain + ## HITS:1 COG:SPy0902 KEGG:ns NR:ns ## COG: SPy0902 COG0154 # Protein_GI_number: 15674924 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Streptococcus pyogenes M1 GAS # 113 571 3 475 484 261 38.0 3e-69 MKKSILFKKLGIILLISQTLVGVPMLAQESILETTVQTETESVTTETSQTVANLESETTS QTVMQEKESSSAIAESSSGNVVAVTTETTNEIQNSDTDRKAVSAENVFSEADYKQATALE LATLVREKKVTSEELVKIALAITKRENPTLNAVITLREEAALTEAKALQDTGQPFLGVPL LLKGLGQSLKGESNTNGFGFLQDQVAGGTSTFVKALQNAGFIIIGQTNYPELGWKNISDS KLYGVSVNPWNPNHYSGGSSGGAGASVAAAFVPIASGSDAGGSIRIPASWTGTVGLKPSR GVIIGNSNSAKGQTVHFGLSRTVADTNALFETLLTKKDLPAGHLSQAQPIAYTTESPAGT PVSAEAKEAVAEAVAFLKDQGYTLVEVKHPVDGERLMKNYYTVAAGSAGIADFMARQKLK RPLERNDVELLTWALFQTGKNITSEETTAAWTDIALQAQAMDEFYQQYPILLTPTTAATA PSIDNPLLKPEHAAQMEKIDQLSPAEQKQLIYDQWLTAFTYTPFTQQANLFGHPALSVPT YVSKEGLPLGIQFNSALNEDRTLLQLGALFENNHKINQPHVEEPEKDKEPDASGEPDKDK EPNASGEPDKGKETKTSEGPIEGKD >gi|237663591|gb|GG668927.1| GENE 150 144842 - 144985 144 47 aa, chain + ## HITS:1 COG:no KEGG:EF1033 NR:ns ## KEGG: EF1033 # Name: not_defined # Def: 6-aminohexanoate-cyclic-dimer hydrolase, putative # Organism: E.faecalis # Pathway: not_defined # 1 46 684 729 729 92 95.0 4e-18 MIGKQEQLPKKVLPKAGAEVPSTFWIVLGGAFLVTSGTIYIRKTRKR >gi|237663591|gb|GG668927.1| GENE 151 145077 - 146006 779 309 aa, chain + ## HITS:1 COG:BH2734_1 KEGG:ns NR:ns ## COG: BH2734_1 COG3173 # Protein_GI_number: 15615297 # Func_class: R General function prediction only # Function: Predicted aminoglycoside phosphotransferase # Organism: Bacillus halodurans # 7 299 4 294 336 187 35.0 2e-47 MRAFEKIPAFQQWQKVEAIHRGWSTDLKFKVTKNQETFLLRIFQQEELLAKQQEYQFIKK VAALGFPSSKPFLCAPIPESEQGYMLLTYLEGEDLSDVLPAISPKRQLNLGVEAGRYLNK IHKLLLPERISQREIARNLYEKKQSQLNKYKESQFCMPYQQPIISYLEKQLPLLQQRPVV YQHGDFHVGNFIYLPTRQAGVIDFNRWDFGDPYEEFYKLQFFSRKVSPLFAYGQLQGYFA GKVPTLFWQFQKLYTFHAGLYSLVWALSFGEKEIRTMEQQYQQLLEDYNCGELLVPKWFS TIQRKGLRF >gi|237663591|gb|GG668927.1| GENE 152 146049 - 146702 759 217 aa, chain + ## HITS:1 COG:no KEGG:EF1035 NR:ns ## KEGG: EF1035 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 217 1 217 217 363 98.0 3e-99 MKLNGIIMIAVVGSVLSGCGWQKSKEESQKVRTVQTNNVNTEETRAISATEVSQTTALEL EQTTQTQELTELVTEEGTIWNQQKAKQLGQYMETWGQERNQNYQAYQPGHSVAFYTIQVP DDLLSYEPKIQPAIGNNPIWLNWSETGNEGGYCLVAVYSDSATQVAQKHVYLFTLVNGEA KVYVSKEQPVEEQPYLFLKETSNTELKEQFTNLVNNL >gi|237663591|gb|GG668927.1| GENE 153 146824 - 147225 555 133 aa, chain + ## HITS:1 COG:BH1654 KEGG:ns NR:ns ## COG: BH1654 COG0105 # Protein_GI_number: 15614217 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Bacillus halodurans # 3 132 2 131 147 133 50.0 6e-32 MKETSLVIIKPDGVERKLVGKIIQRFEDKGIDLLHLKFERLTVETVKEHYEHLKDELFFP ELLAYMTSGPVVVMVVVGDNVVKKVRKLVGATNPLDAESGTLRADYGLSVTKNLIHASDS VQSAKIEMQRFFG >gi|237663591|gb|GG668927.1| GENE 154 147385 - 148995 1583 536 aa, chain + ## HITS:1 COG:MJ0001 KEGG:ns NR:ns ## COG: MJ0001 COG0436 # Protein_GI_number: 15668173 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Methanococcus jannaschii # 186 349 103 251 375 61 27.0 4e-09 MITSDELTENLSPFELSLFLEKKLHEENHNLETLLNAGRGNPNWTAPTPREAFFLLGQFA TKETLREGSEQTAGMIQPSFGRTQRFLNFLAENPSKGATFLQEIWTAEHNYFGMDKEMWL DAMLDYVIGDNYPNPVRCLKACEQPIKAYLNQELFSSEAQPFDIFAVEGGTAGICYLFDT LANNYLLEKGDRIALLLPTFAPYLEIPELPRYDFDVVKIKAEQMIIDGKTTYQYSNKEID KLKDPSIKAVFVVNPSNPTANAMGKPTIEQIKQIVAVDNPKLMILTDDVYGTFVPAFRSL FTELPYNTACIYSYSKYFGATGWRVGTIAVSQENIFDQLLKELPVARKMELQARYATLNA DTSQINFISRLVADSRDIALNHAAGLSSIQQAMMALFSLYALLKDGQAYKDEVMDICHTR EKLLFRTLGIEEPLASLNTAYYCEINFRDWTEKRYGPEFSSYLTKSWTITKVLTSLAEKE KLMLLKADAFGSDKWSVRISLANLATNQYSEVGKRMIRLSEHIKEEWLRQKRQAIK >gi|237663591|gb|GG668927.1| GENE 155 149137 - 150222 1085 361 aa, chain + ## HITS:1 COG:no KEGG:EF1038 NR:ns ## KEGG: EF1038 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 361 1 361 361 640 98.0 0 MKHIKGMLVFIGLFILVGCAPDQESTKQTTSGPQETKQVKQVTVTNQTTSAVEKQAPTKN DELIANQLTFDSHEYTYEVVTGATQTTFGTTPPAKYTPEEKKEKMFWSNQPPLGLMTGNY YKNEGVFTGGNYGIVEIITEPETQRILNVEFTEFASDPYYDTRYSGVNKRLSDYPGFQAS NTRTDDTLVTVVNGITYVEKQMRDENRVTGNFYTVRGSSTSAREGLMPLAAEMDTWLKEP SKETYIGYAEDLGNGLIGRLQVITEEQKIKHVSYDEYFSDEQEKITETALRPFYRQSKYY SPGYNKQTNNSFIHFVDALTKAITTQQTLSVNEEQELQHPSFTTYQRLAEKISTFQNSLK E >gi|237663591|gb|GG668927.1| GENE 156 150338 - 151141 977 267 aa, chain - ## HITS:1 COG:SP0286 KEGG:ns NR:ns ## COG: SP0286 COG0561 # Protein_GI_number: 15900220 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pneumoniae TIGR4 # 2 263 3 267 270 209 40.0 4e-54 MKKLIAIDLDGTTLNAQSLISPKTEQTLKKAIDNGHYVSIATGRPYRMSHQFYQQLGLTT PMVNFNGALVHIPEKKWDLESEANIERDLVFDILAQKKELQLDFVAAENKETFYIDTLDG FDPKFFASKATLDNLLNAKNLRTNPTSMMVRTTPNQAEKVADTLTKQYGDYIDVRTWGGP MPILEMVAKGIQKAHGVDQVANFLSVKPADIIAFGDEHNDEEMLSYAGWGVAMNNATDKI KSVANDVTEKTNDQDGLADYLENYLDL >gi|237663591|gb|GG668927.1| GENE 157 151293 - 151922 463 209 aa, chain + ## HITS:1 COG:lin2252 KEGG:ns NR:ns ## COG: lin2252 COG4330 # Protein_GI_number: 16801316 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 9 185 9 191 213 80 33.0 1e-15 MKNSRNYLRVITLIYCIYMWLFATHFHFMALNVLLAYIPIELSYLLNAEKRKRDWLIGFA WLIFYPNAPYLFTDFFHLETLSIYRGFNTIFANQIGDWWAFVCLTSGIVIYGLLGMKTVT TVSQKLQSYCGYRTIIGFQASLHFLSALAIYVGRFDRLHSVYLFMNPIETVKIIFFDWSL QKLMFILLMMFLQMLLFGLIQLLGKEEAM >gi|237663591|gb|GG668927.1| GENE 158 152074 - 153480 1638 468 aa, chain + ## HITS:1 COG:SPy1736 KEGG:ns NR:ns ## COG: SPy1736 COG2252 # Protein_GI_number: 15675585 # Func_class: R General function prediction only # Function: Permeases # Organism: Streptococcus pyogenes M1 GAS # 1 468 1 486 486 503 66.0 1e-142 MNTFFKLKENKTTVSTEIMAGVTTFFAMSYILFVNPSILSETGMPFQAVFLATIIASIIG TLIMGLFANVPYAQAPGMGLNAFFTFTVVFGMGYTWQQALAMVFICGLINILITVTKIRK MIIKAIPESLQHAIGGGIGIFVAYVGLKNAGLLSFTVQAEPQNGVVNGSSIVPALGNFDN PAIILAVIGLVLTTILVVTNVRGAILIGIVVTTLVAIPMGVVDTASVDWHANSLGNSFKE LGTTFGAAFGAEGLQSLFSDSSKIPQVLMTIIAFSLSDTFDTIGTFIGTGRRTGIFSKED ELALEDSKGFSTKMDKALFADAIATSIGAIFGTSNTTTYVESAAGIGAGGRTGLTSVVVA ILFALSSLFSPLIAIVPAQATAPALILVGIMMLASFKDINWTDLEDAIPAFFASIFMGLC YSISYGIAAGFIFYAVVKVVKGKAKEVSPIIWVIDALFILNFVILAIL >gi|237663591|gb|GG668927.1| GENE 159 153690 - 154886 927 398 aa, chain + ## HITS:1 COG:L60571 KEGG:ns NR:ns ## COG: L60571 COG0477 # Protein_GI_number: 15672648 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 3 397 7 401 405 431 57.0 1e-120 MKIKWKQNLLVAWIGCFFTGASISLVMPFIPVYVEQLGTPKSQVELFSGLAISVTAFAAA IVAPIWGNLADRKGRKIMMIRAAAGMTITMGALAFVPNVYWLLIMRFMNGILSGYIPNAT AMIASQAPKEKNGWALGTLSTGAIAGTLIAPSIGGALAQWFGMENVFIITGVILFITTLL TIFLVKEDFQPVEKKDLLTTKEIFSKMDHVSVLIGLFVTTLILQLGITSISPILTLYIRS LSGDTENVLFVSGLIVSIAGVSAIISSPTLGKIGDRIGNQKVLLGGLILSFICYIPMAFV QTPFQLGVLRFLLGFSTGALMPSINTLISKITPTEGVSRVYSYNQMCSNFGQVLGPMVGS TVAHGFGYSSVFLVTACFVLGNIGLSFFNFRKVLNKKL >gi|237663591|gb|GG668927.1| GENE 160 154941 - 155126 260 61 aa, chain - ## HITS:1 COG:no KEGG:EF1043 NR:ns ## KEGG: EF1043 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 61 1 61 61 101 100.0 1e-20 MRYLVVFFWTFALGQVVGYIGGALSGGSYDFKMTTILSLATAVIILLIAHFAVPKETKPV K >gi|237663591|gb|GG668927.1| GENE 161 155244 - 158573 3066 1109 aa, chain + ## HITS:1 COG:lin1609 KEGG:ns NR:ns ## COG: lin1609 COG0587 # Protein_GI_number: 16800677 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Listeria innocua # 1 1109 1 1108 1108 878 44.0 0 MSFPQLHTVTSYSLLSSTVRIRSYVKQAKALGYQTLAITDINVLHGAVEFYEACQEAGIQ PIIGLRLEYTPAEKEGHSELLLFAKNLKGYQQLMQLSSSKMTTEGPFYLAEHQSLLSDLF AVTLSAKGEVAQTFFEDEQQAVHAFQQLASYFDPQSLFVEHSFSMNQQRNPALFSFYQRE QLPGVALQEVRHLTREEGFAVTVLESIKENNQLNITSQTPEIEGLNYLREAETTMEQMLQ IAGAEVVQNTIQLAENCRVDIPLHQKLLPHFPVPDNQTAGSYLRTLCLEKLPERVPHLNE VYQKRLEKELTIIHNMGFDDYFLIVWDVMDFCHNNQIVTGAGRGSAAGSLVSYVLSITDV DPIKYDLLFERFLNPERYTMPDIDLDIPDNRREEVLAYVSQKYGHYHMAQIATFGTMAAK MVLRDVARVFGLSQSEANRWSAAVPNKLKITLEEAYQESKRMQELVNFSPNNQLLYKTAV QLEGLPRHVSTHAAGVVISDENLLNLVPLQLGSNEILLTQFTMNDVEKIGLLKMDFLGLR NLSIIDDTLTAIKRVYNQTIHLNQIPLDDETTLALFRKGETSGVFQFESAGIRNVLRKLG PTSIEDIAAVNALYRPGPMQNIDVFIRRKKGLEQISYPEPSLAPILENTYGIIVYQEQIM QVAAKMAGFSLGQADILRRAISKKKKDVLDEERNHFVNGALQQGYPQETANQVYDYIERF ANYGFNRSHAFAYSFIGFQMAYLKVHYPSAFYVALLHSVRHNPTKIKEYIGEARKNKQTI LQPSINQSHYSFYLNQQQQILFGFSSLKGIRRDFIQNILNERRENGPYKTFDEFLLRIDR KWLKVENIEPLIAIGAFDEIAPNRRQLAVGLESNIQSILLSGGSMDLLETLKPKEEEIAD YPLEERLEQEEQYLGVYLSGHPTEEFKKTRLAKQTQLVHELVENQSTKLLIYVKNIRTIR TKKGEQMAFVDGDDTTGSISLTLFPTVFRQLRQSVEKGQVYYVEGKVERSTYNQELQILV QRIEKAQQVETSISDETCFIRITKDVEQTDVFQKMKEVLSRHAGHIPVIVYFEKTGKKIV LNEENWVAHTSASQQQLAYVLGEQNVIFK >gi|237663591|gb|GG668927.1| GENE 162 158746 - 159708 1345 320 aa, chain + ## HITS:1 COG:lin1606 KEGG:ns NR:ns ## COG: lin1606 COG0205 # Protein_GI_number: 16800674 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Listeria innocua # 1 314 1 313 319 439 71.0 1e-123 MKRIGILTSGGDAPGMNAAIRAVVRKSIFDGIEVYGINYGFAGLVAGDIRRLDVADVGDK IQRGGTFLYSARYPEFATEEGQLKGIEQLKKFGIEGLVVIGGDGSYHGAMALTKRGFPAV GIPGTIDNDIPGTDFTIGFDTAINTVLESIDRIRDTATSHVRTFVIEVMGRNAGDIALWS GVAGGADEIIIPEHDFDMKNVAKRIQEGRDRGKKHCLIILAEGVMGGNEFADKLSEYGDF HTRVSILGHVVRGGSPSARDRVLASKFGSYAVELLKEGKGGLCIGMLDNQVVAADIIDTL ENNKHKPDLSLYELNHEISF >gi|237663591|gb|GG668927.1| GENE 163 159773 - 161530 2276 585 aa, chain + ## HITS:1 COG:lin1605_1 KEGG:ns NR:ns ## COG: lin1605_1 COG0469 # Protein_GI_number: 16800673 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Listeria innocua # 1 475 1 475 475 683 77.0 0 MKKTKIVCTIGPASESVDMLVNLINAGMNVCRLNFSHGDYEEHGARIKNIREAVKITGKR VAILLDTKGPEIRTNDMENGAITMKIGDSVRISMTEVLGTNEKFSITYPELINDVNVGSH ILLDDGLIDLEVTDIDRDANEIVTVVKNEGVLKNKKGVNVPGVSVNLPGITEKDANDIRF GIGQGIDFIAASFVRRASDVLEITKILEEENATHIQIIPKIENQEGIDNIDEILKVSDGL MVARGDMGVEIPTEDVPVVQKALIKKCNALGKPVITATQMLDSMQRNPRPTRAEANDVAN AIYDGTDAVMLSGETAAGDYPLEAVQTMARIAVRTEETLVNQDSFALKLYSKTDMTEAIG QSVGHTARNLGIQTIVAATESGHTARMISKYRPKAHIVAITFSEQKARSLSLSWGVYATV ADKPSSTDEMFNLASKVSQEEGYASEGDLIIITAGVPVGEKGTTNLMKIQMIGSKLVQGQ GVGEEAIIAKAVVAGTAEEAVAKATEGAILVTKTTDKEYMPAIEKASALVVEEGGLTSHA AVVAIAQNIPVIVGAADATSLINNDEVITVDPRRGIVYRGATTAI >gi|237663591|gb|GG668927.1| GENE 164 161904 - 162473 609 189 aa, chain + ## HITS:1 COG:L39365 KEGG:ns NR:ns ## COG: L39365 COG1399 # Protein_GI_number: 15673577 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Lactococcus lactis # 1 170 1 167 176 115 42.0 4e-26 MKWSLLELNKYKEEPLVFSETLHLKEELLQRDDTLLDVSPIKVEGLLAVNKSEYLLHYTI QVTVTVPSSRSLEPVALPMQITVDEVFMTKEQMDTRDERFAAEEIILLDKPTIDLDESVE DNILLSIPIQVLTEEEQNSQEMPSGNDWEVISEEAYLESKQKAAEQTVDPRLAKLSELLS DNAEKEDNS >gi|237663591|gb|GG668927.1| GENE 165 162530 - 162709 322 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29375627|ref|NP_814781.1| 50S ribosomal protein L32 [Enterococcus faecalis V583] # 1 59 1 59 59 128 100 1e-28 MAVPARRTSKAKKAKRRTHYKLTIKGLNACSNCGEMKKSHHVCPACGHYDGKDVMSKEA >gi|237663591|gb|GG668927.1| GENE 166 162914 - 164335 1807 473 aa, chain + ## HITS:1 COG:SP0375 KEGG:ns NR:ns ## COG: SP0375 COG0362 # Protein_GI_number: 15900298 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 473 1 474 474 788 80.0 0 MTKQQFGVVGMAVMGKNLALNIESRGYTVALYNRTGSKTTEVVEEHPDKNFQATYSIEEF VNAIEKPRRIMLMVKAGPATDATIQELLPHLDKGDILIDGGNTFFKDTMRRNEELANSGI NFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILEKISAKAEDGEPCVTYIGPNGAGH YVKMVHNGIEYGDMQLIAESYDLMKQILGLSVDEMAEIFKEWNEGELDSYLIEITADILT RKDDEGTDQPIVDVILDAAGNKGTGKWTSQSALDLGVPLPLITESVFARFISAYKEERVK ASGILSKPAAFDFAGDKKELIEKIREALYFSKLMSYAQGFAQLRAASEEYGWDLPFGEIA KIWRAGCIIRAQFLQKITDAYEKNPALENLLLDEYFVEITKKYQQAVREVVAIAVQAGVP VPTFSSAIAYYDSYRSDRLPANLIQAQRDYFGAHTYERTDKEGIYHYSWYNEE >gi|237663591|gb|GG668927.1| GENE 167 164493 - 165179 872 228 aa, chain + ## HITS:1 COG:lin1414 KEGG:ns NR:ns ## COG: lin1414 COG0745 # Protein_GI_number: 16800482 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Listeria innocua # 1 228 1 226 226 307 80.0 9e-84 MSNILIIEDEKNLARFVELELKHEGYTTEVHYNGRTGLEAALNNEWDAILLDLMLPELNG LEVCRRVRQVKNTPIIMMTARDSVIDRVSGLDHGADDYIVKPFAIEELLARLRALLRRID IEGDKNVAKQTTITYRDLTIEKENRVVRRNSEMIELTKREYELLLTLMENVNVVLARDVL LNKVWGYETEVETNVVDVYIRYLRNKIDVPGEESYIQTVRGTGYVMRS >gi|237663591|gb|GG668927.1| GENE 168 165190 - 166681 1241 497 aa, chain + ## HITS:1 COG:L0130 KEGG:ns NR:ns ## COG: L0130 COG0642 # Protein_GI_number: 15673575 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Lactococcus lactis # 2 491 11 488 491 332 39.0 7e-91 MKRTIKKELEGPSLTIKWAFASSFFIFVVFTIFAVITYKSSVSLIVAKEKENVEATIAEV TNRLANANENLTVTDVFDYLKTPSERDENYYNKHTAVEGSFMEMDSFISELGQPELYLSV YDTNQKLVFKTQNEYDKLLQLDRQLPVVRTVFDKTGFYSVEPIFSKETREKIGYIQAFYE LSSFYEIRNHLLLTLVVLEVISLIVSSVLGFILSSYFLKPLKVLRDTMDTIRKDPQSDVH MPEINTRDELADISEIFNEMLDRMRRYIEQQEQFVEDVSHELRTPVAIMEGHLNLLNRWG KDDPEILDESLKASLQEISRMKSLVQEMLDLSRAEQVDTQYANERTDAKQVVYQVFNNFQ LVYPEFHITLDDDLPTEVELKIYRNHFEQLLIILLDNAIKYSTDRKEVHISISRTMNEFE IAVQDFGEGITEEDLEKIFDRFYRVDKARARNKGGNGLGLSIAKQLVENYKGRIDAESVL HQGTIFRIFIPIAGIKE Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:06:42 2011 Seq name: gi|237663590|gb|GG668928.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD7, whole genome shotgun sequence Length of sequence - 164308 bp Number of predicted genes - 152, with homology - 145 Number of transcription units - 76, operones - 36 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 21 - 248 120 ## COG0582 Integrase + Prom 298 - 357 6.0 2 2 Tu 1 . + CDS 460 - 900 464 ## COG0693 Putative intracellular protease/amidase + Term 903 - 946 11.7 - Term 886 - 939 18.1 3 3 Op 1 . - CDS 991 - 2442 1380 ## COG1288 Predicted membrane protein 4 3 Op 2 . - CDS 2490 - 3179 446 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 5 3 Op 3 8/0.000 - CDS 3207 - 4139 1157 ## COG0549 Carbamate kinase - Prom 4161 - 4220 4.0 - Term 4163 - 4205 9.4 6 4 Op 1 7/0.000 - CDS 4245 - 5264 1455 ## COG0078 Ornithine carbamoyltransferase 7 4 Op 2 1/0.071 - CDS 5293 - 6519 1429 ## PROTEIN SUPPORTED gi|149020061|ref|ZP_01835035.1| 50S ribosomal protein L33 - Prom 6684 - 6743 20.1 - Term 6761 - 6813 11.1 8 5 Tu 1 . - CDS 6816 - 7304 464 ## COG1438 Arginine repressor - Prom 7460 - 7519 5.3 9 6 Tu 1 . + CDS 7548 - 8027 401 ## COG1438 Arginine repressor + Term 8090 - 8132 2.6 - Term 8077 - 8116 8.0 10 7 Tu 1 . - CDS 8183 - 9505 190 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Prom 9640 - 9699 9.4 - Term 9528 - 9579 -0.6 11 8 Tu 1 . - CDS 9784 - 10212 232 ## COG3271 Predicted double-glycine peptidase 12 9 Op 1 . - CDS 10298 - 10864 233 ## gi|227518014|ref|ZP_03948063.1| hypothetical protein HMPREF0348_0997 13 9 Op 2 . - CDS 10927 - 11592 282 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 14 9 Op 3 . - CDS 11620 - 12081 340 ## gi|227518016|ref|ZP_03948065.1| hypothetical protein HMPREF0348_0999 - Prom 12106 - 12165 2.0 - Term 12106 - 12149 4.2 15 9 Op 4 . - CDS 12168 - 12317 177 ## gi|227518017|ref|ZP_03948066.1| hypothetical protein HMPREF0348_1000 - Prom 12345 - 12404 10.8 + Prom 12486 - 12545 9.7 16 10 Tu 1 . + CDS 12566 - 13480 670 ## COG2267 Lysophospholipase + Term 13485 - 13524 8.6 - Term 13473 - 13512 8.6 17 11 Op 1 . - CDS 13517 - 14788 1327 ## COG0172 Seryl-tRNA synthetase 18 11 Op 2 9/0.000 - CDS 14815 - 15708 1233 ## COG1760 L-serine deaminase 19 11 Op 3 1/0.071 - CDS 15723 - 16430 822 ## COG1760 L-serine deaminase 20 11 Op 4 . - CDS 16405 - 17511 1421 ## COG1299 Phosphotransferase system, fructose-specific IIC component - Prom 17644 - 17703 7.1 + Prom 17512 - 17571 9.9 21 12 Tu 1 . + CDS 17768 - 18448 759 ## COG2964 Uncharacterized protein conserved in bacteria + Term 18458 - 18497 10.7 - Term 18439 - 18490 16.7 22 13 Tu 1 . - CDS 18507 - 19292 739 ## EF0095 putative lipoprotein - Prom 19351 - 19410 6.5 - Term 19378 - 19435 18.1 23 14 Op 1 . - CDS 19448 - 20209 929 ## COG2116 Formate/nitrite family of transporters - Prom 20306 - 20365 7.1 24 14 Op 2 . - CDS 20709 - 20915 296 ## - Prom 20967 - 21026 41.5 25 15 Op 1 . - CDS 21028 - 23277 2127 ## EF0093 cell wall surface anchor family protein 26 15 Op 2 . - CDS 23292 - 23531 310 ## EF0092 hypothetical protein - Term 23726 - 23784 22.4 27 16 Op 1 . - CDS 23871 - 25376 1326 ## EF0091 hypothetical protein - Prom 25397 - 25456 4.2 28 16 Op 2 . - CDS 25458 - 26369 996 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Prom 26416 - 26475 8.4 - Term 26584 - 26632 11.4 29 17 Tu 1 . - CDS 26655 - 32753 7016 ## COG4932 Predicted outer membrane protein - Prom 32810 - 32869 3.6 + Prom 33229 - 33288 9.1 30 18 Op 1 . + CDS 33465 - 34952 917 ## EF0086 hypothetical protein 31 18 Op 2 . + CDS 34946 - 36430 1210 ## EF0085 hypothetical protein + Term 36459 - 36524 16.1 - Term 36136 - 36189 -0.1 32 19 Tu 1 . - CDS 36402 - 36488 56 ## - Prom 36511 - 36570 5.1 - Term 36517 - 36565 11.0 33 20 Op 1 . - CDS 36639 - 36818 307 ## EF0083 hypothetical protein 34 20 Op 2 . - CDS 36839 - 38074 1404 ## COG0477 Permeases of the major facilitator superfamily - Prom 38233 - 38292 7.1 - Term 38380 - 38424 13.2 35 21 Op 1 . - CDS 38441 - 38683 467 ## COG2261 Predicted membrane protein 36 21 Op 2 . - CDS 38707 - 39267 917 ## COG1302 Uncharacterized protein conserved in bacteria 37 21 Op 3 . - CDS 39326 - 39838 724 ## COG1302 Uncharacterized protein conserved in bacteria 38 21 Op 4 . - CDS 39851 - 40042 267 ## EF0078 hypothetical protein 39 21 Op 5 . - CDS 40055 - 40627 651 ## EF0077 hypothetical protein 40 21 Op 6 . - CDS 40640 - 41533 1090 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 41613 - 41672 10.7 + Prom 41599 - 41658 7.0 41 22 Tu 1 . + CDS 41807 - 42460 727 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 42470 - 42509 8.1 42 23 Op 1 . - CDS 42502 - 43419 764 ## EF0073 Cro/CI family transcriptional regulator - Prom 43477 - 43536 10.6 43 23 Op 2 . - CDS 43605 - 43694 61 ## - Prom 43816 - 43875 11.1 - Term 43917 - 43959 8.5 44 24 Tu 1 . - CDS 43965 - 46304 2486 ## EF0071 putative lipoprotein - Prom 46326 - 46385 5.0 + Prom 46241 - 46300 3.1 45 25 Tu 1 . + CDS 46323 - 46397 87 ## + Term 46603 - 46665 3.0 - Term 46391 - 46426 0.3 46 26 Tu 1 . - CDS 46483 - 47178 703 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase - Prom 47208 - 47267 5.4 - Term 47266 - 47314 12.6 47 27 Op 1 29/0.000 - CDS 47323 - 48339 1310 ## COG2255 Holliday junction resolvasome, helicase subunit 48 27 Op 2 . - CDS 48352 - 48966 804 ## COG0632 Holliday junction resolvasome, DNA-binding subunit - Prom 49130 - 49189 5.4 + Prom 49101 - 49160 6.3 49 28 Op 1 . + CDS 49185 - 50171 1255 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 50 28 Op 2 . + CDS 50186 - 50410 363 ## EF0064 hypothetical protein + Term 50413 - 50462 13.4 - Term 50400 - 50450 13.1 51 29 Op 1 . - CDS 50459 - 52138 1974 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 52187 - 52246 13.1 - Term 52226 - 52262 2.0 52 29 Op 2 . - CDS 52274 - 56275 4682 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 56484 - 56543 10.5 - Term 56658 - 56701 12.6 53 30 Tu 1 . - CDS 56716 - 58092 1739 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) - Prom 58152 - 58211 6.6 - Term 58243 - 58299 14.3 54 31 Tu 1 . - CDS 58303 - 59124 1011 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 59150 - 59209 6.0 - Term 59232 - 59267 5.3 55 32 Op 1 42/0.000 - CDS 59268 - 60107 1067 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components - Prom 60136 - 60195 4.8 56 32 Op 2 25/0.000 - CDS 60269 - 60961 231 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 57 32 Op 3 . - CDS 60987 - 61940 1067 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 61993 - 62052 5.4 - Term 62036 - 62099 26.3 58 33 Op 1 . - CDS 62108 - 62959 716 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase - Prom 62994 - 63053 4.1 - Term 63078 - 63127 12.1 59 33 Op 2 . - CDS 63140 - 63385 333 ## COG4466 Uncharacterized protein conserved in bacteria - Prom 63426 - 63485 4.2 60 34 Op 1 5/0.000 - CDS 63500 - 64066 641 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 61 34 Op 2 6/0.000 - CDS 64152 - 64682 530 ## COG3688 Predicted RNA-binding protein containing a PIN domain 62 34 Op 3 7/0.000 - CDS 64697 - 65554 564 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 63 34 Op 4 8/0.000 - CDS 65544 - 65942 345 ## PROTEIN SUPPORTED gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 64 34 Op 5 4/0.000 - CDS 65939 - 67351 1530 ## COG0215 Cysteinyl-tRNA synthetase 65 34 Op 6 4/0.000 - CDS 67344 - 67883 589 ## COG1045 Serine acetyltransferase - Prom 67903 - 67962 8.2 - Term 67906 - 67959 14.0 66 35 Op 1 3/0.000 - CDS 68153 - 69610 1887 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 67 35 Op 2 . - CDS 69663 - 70136 479 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 68 35 Op 3 2/0.071 - CDS 70155 - 71300 1314 ## COG4956 Integral membrane protein (PIN domain superfamily) - Prom 71340 - 71399 1.7 69 36 Op 1 1/0.071 - CDS 71401 - 72771 1365 ## COG1066 Predicted ATP-dependent serine protease 70 36 Op 2 . - CDS 72850 - 73329 569 ## COG0756 dUTPase + Prom 73565 - 73624 8.5 71 37 Op 1 22/0.000 + CDS 73655 - 74470 963 ## COG0263 Glutamate 5-kinase 72 37 Op 2 . + CDS 74463 - 75710 1286 ## COG0014 Gamma-glutamyl phosphate reductase + Term 75714 - 75759 12.5 - Term 75703 - 75747 8.3 73 38 Tu 1 . - CDS 75802 - 76758 760 ## COG2378 Predicted transcriptional regulator - Prom 76990 - 77049 7.0 + Prom 76732 - 76791 3.7 74 39 Op 1 . + CDS 76814 - 77281 541 ## EF0035 hypothetical protein 75 39 Op 2 . + CDS 77289 - 77798 611 ## COG4283 Uncharacterized conserved protein + Term 77846 - 77885 3.1 76 40 Tu 1 . + CDS 78358 - 80973 2276 ## COG4485 Predicted membrane protein + Term 80978 - 81016 9.3 - Term 80966 - 81004 6.1 77 41 Tu 1 . - CDS 81010 - 83601 2119 ## COG2898 Uncharacterized conserved protein - Prom 83698 - 83757 4.4 - Term 83728 - 83774 6.4 78 42 Op 1 . - CDS 83790 - 84170 407 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 84205 - 84264 6.0 79 42 Op 2 3/0.000 - CDS 84270 - 85475 891 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 80 42 Op 3 3/0.000 - CDS 85499 - 87067 1625 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 87125 - 87184 4.7 81 42 Op 4 . - CDS 87216 - 87986 655 ## COG1737 Transcriptional regulators - Prom 88009 - 88068 8.4 + Prom 87966 - 88025 9.4 82 43 Tu 1 . + CDS 88184 - 88387 243 ## EF0026 hypothetical protein + Term 88395 - 88432 6.0 - Term 88382 - 88419 6.0 83 44 Tu 1 . - CDS 88434 - 88961 684 ## COG3247 Uncharacterized conserved protein - Prom 88993 - 89052 11.4 84 45 Op 1 . - CDS 89092 - 89178 56 ## 85 45 Op 2 4/0.000 - CDS 89228 - 89605 386 ## COG4687 Uncharacterized protein conserved in bacteria - Prom 89635 - 89694 6.0 86 45 Op 3 13/0.000 - CDS 90042 - 90953 1283 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 87 45 Op 4 13/0.000 - CDS 90976 - 91779 1086 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 88 45 Op 5 . - CDS 91814 - 92806 1313 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 92886 - 92945 6.2 - Term 92971 - 93008 -0.7 89 46 Tu 1 . - CDS 93041 - 93553 529 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 93682 - 93741 8.2 - Term 93701 - 93751 13.3 90 47 Tu 1 . - CDS 93756 - 96641 2634 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain - Prom 96746 - 96805 10.8 + Prom 96802 - 96861 7.6 91 48 Tu 1 . + CDS 96895 - 98526 1895 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 98679 - 98746 31.1 - Term 98520 - 98586 31.6 92 49 Op 1 . - CDS 98722 - 99600 926 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 99623 - 99682 9.8 - Term 99657 - 99711 6.1 93 49 Op 2 3/0.000 - CDS 99725 - 101128 1586 ## COG0104 Adenylosuccinate synthase - Prom 101155 - 101214 5.3 - Term 101217 - 101249 2.5 94 49 Op 3 16/0.000 - CDS 101254 - 102621 1553 ## COG0305 Replicative DNA helicase - Prom 102810 - 102869 8.9 - Term 102845 - 102877 1.5 95 50 Op 1 9/0.000 - CDS 102894 - 103355 759 ## PROTEIN SUPPORTED gi|227518097|ref|ZP_03948146.1| 50S ribosomal protein L9 96 50 Op 2 . - CDS 103352 - 105328 785 ## PROTEIN SUPPORTED gi|162447066|ref|YP_001620198.1| bipartite protein: signaling protein and ribosomal protein L9 - Prom 105501 - 105560 80.4 - Term 106155 - 106192 7.3 97 51 Op 1 21/0.000 - CDS 106210 - 106449 397 ## PROTEIN SUPPORTED gi|29374670|ref|NP_813822.1| 30S ribosomal protein S18 98 51 Op 2 24/0.000 - CDS 106475 - 107041 644 ## COG0629 Single-stranded DNA-binding protein 99 51 Op 3 . - CDS 107086 - 107388 510 ## PROTEIN SUPPORTED gi|29374668|ref|NP_813820.1| 30S ribosomal protein S6 - Prom 107545 - 107604 80.4 100 52 Op 1 24/0.000 - CDS 107841 - 110342 3075 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 101 52 Op 2 9/0.000 - CDS 110398 - 112347 2234 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 102 52 Op 3 9/0.000 - CDS 112344 - 113471 1110 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 103 52 Op 4 6/0.000 - CDS 113458 - 113703 319 ## COG2501 Uncharacterized conserved protein - Prom 113847 - 113906 9.6 - Term 114075 - 114116 1.3 104 53 Op 1 16/0.000 - CDS 114283 - 115413 1454 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) - Prom 115469 - 115528 4.0 105 53 Op 2 . - CDS 115615 - 116958 1243 ## COG0593 ATPase involved in DNA replication initiation + Prom 117373 - 117432 7.3 106 54 Tu 1 . + CDS 117481 - 117615 223 ## PROTEIN SUPPORTED gi|29377774|ref|NP_816928.1| 50S ribosomal protein L34 + Term 117654 - 117713 9.1 + Prom 117668 - 117727 4.4 107 55 Op 1 22/0.000 + CDS 117813 - 118175 303 ## COG0594 RNase P protein component 108 55 Op 2 16/0.000 + CDS 118175 - 119002 993 ## COG0706 Preprotein translocase subunit YidC 109 55 Op 3 . + CDS 119017 - 119793 1071 ## COG1847 Predicted RNA-binding protein + Term 119883 - 119949 28.4 + Prom 119857 - 119916 80.4 110 56 Tu 1 . + CDS 120133 - 120855 601 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 120861 - 120903 11.1 - Term 120849 - 120888 5.1 111 57 Tu 1 . - CDS 120899 - 121594 854 ## COG1802 Transcriptional regulators - Prom 121632 - 121691 8.2 - Term 121672 - 121716 4.8 112 58 Tu 1 . - CDS 121728 - 123125 1659 ## COG2851 H+/citrate symporter - Prom 123277 - 123336 7.5 + Prom 123440 - 123499 3.9 113 59 Op 1 . + CDS 123529 - 123891 349 ## EF3326 hypothetical protein 114 59 Op 2 9/0.000 + CDS 123875 - 124276 554 ## COG0511 Biotin carboxyl carrier protein 115 59 Op 3 . + CDS 124306 - 125421 1504 ## COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 116 59 Op 4 . + CDS 125443 - 125577 264 ## EF3323 hypothetical protein 117 59 Op 5 5/0.000 + CDS 125592 - 126602 1035 ## COG3053 Citrate lyase synthetase 118 59 Op 6 6/0.000 + CDS 126608 - 126916 409 ## COG3052 Citrate lyase, gamma subunit 119 59 Op 7 6/0.000 + CDS 126904 - 127791 1088 ## COG2301 Citrate lyase beta subunit 120 59 Op 8 7/0.000 + CDS 127794 - 129326 1860 ## COG3051 Citrate lyase, alpha subunit 121 59 Op 9 1/0.071 + CDS 129307 - 129855 489 ## COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) 122 59 Op 10 . + CDS 129848 - 131245 1683 ## COG5016 Pyruvate/oxaloacetate carboxyltransferase + Term 131282 - 131326 8.2 123 60 Op 1 . + CDS 131363 - 132535 1219 ## COG0281 Malic enzyme 124 60 Op 2 . + CDS 132542 - 133411 836 ## COG1767 Triphosphoribosyl-dephospho-CoA synthetase 125 60 Op 3 . + CDS 133396 - 133569 109 ## gi|307268895|ref|ZP_07550259.1| hypothetical protein HMPREF9498_01025 + Term 133608 - 133640 4.2 + Prom 134014 - 134073 7.6 126 61 Tu 1 . + CDS 134201 - 135400 1237 ## EF3314 cell wall surface anchor family protein + Prom 135702 - 135761 5.0 127 62 Tu 1 . + CDS 135809 - 138856 3674 ## COG1404 Subtilisin-like serine proteases + Term 138878 - 138943 16.5 + Prom 138925 - 138984 6.9 128 63 Op 1 11/0.000 + CDS 139089 - 140486 1812 ## COG0486 Predicted GTPase 129 63 Op 2 . + CDS 140506 - 142404 2285 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division + Term 142414 - 142475 18.0 + Prom 142447 - 142506 8.1 130 64 Op 1 . + CDS 142576 - 143376 915 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 131 64 Op 2 . + CDS 143392 - 145254 1377 ## COG3711 Transcriptional antiterminator 132 64 Op 3 . + CDS 145251 - 145736 551 ## EF3308 transcriptional regulator SrlR 133 64 Op 4 6/0.000 + CDS 145736 - 146290 612 ## COG3730 Phosphotransferase system sorbitol-specific component IIC 134 64 Op 5 6/0.000 + CDS 146307 - 147302 1211 ## COG3732 Phosphotransferase system sorbitol-specific component IIBC 135 64 Op 6 . + CDS 147326 - 147682 469 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 136 64 Op 7 . + CDS 147710 - 148387 816 ## COG0176 Transaldolase + Term 148391 - 148440 12.1 + Prom 148487 - 148546 6.1 137 65 Tu 1 . + CDS 148588 - 150360 1556 ## COG4716 Myosin-crossreactive antigen + Term 150362 - 150407 9.4 + Prom 150687 - 150746 4.2 138 66 Tu 1 . + CDS 150770 - 151756 969 ## EF3301 hypothetical protein + Term 151759 - 151803 12.1 - Term 151741 - 151796 17.3 139 67 Tu 1 . - CDS 151799 - 151894 56 ## - Prom 152114 - 152173 6.0 + Prom 151842 - 151901 4.7 140 68 Op 1 15/0.000 + CDS 152004 - 152720 861 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 141 68 Op 2 25/0.000 + CDS 152736 - 153497 929 ## COG1192 ATPases involved in chromosome partitioning 142 68 Op 3 1/0.071 + CDS 153490 - 154380 1074 ## COG1475 Predicted transcriptional regulators + Prom 154398 - 154457 6.0 143 69 Op 1 4/0.000 + CDS 154498 - 154683 230 ## COG4481 Uncharacterized protein conserved in bacteria 144 69 Op 2 . + CDS 154740 - 155855 1559 ## COG0012 Predicted GTPase, probable translation factor 145 70 Tu 1 . + CDS 155968 - 156657 859 ## COG4858 Uncharacterized membrane-bound protein conserved in bacteria + Term 156717 - 156746 -0.3 146 71 Tu 1 . + CDS 156824 - 158506 1075 ## EF3294 hypothetical protein + Term 158536 - 158582 5.9 + Prom 158576 - 158635 8.6 147 72 Tu 1 . + CDS 158664 - 158771 194 ## COG0516 IMP dehydrogenase/GMP reductase + Prom 159073 - 159132 80.3 148 73 Tu 1 . + CDS 159196 - 160446 1747 ## COG0516 IMP dehydrogenase/GMP reductase + Term 160477 - 160517 10.5 - Term 160602 - 160649 10.2 149 74 Tu 1 . - CDS 160658 - 161929 1598 ## COG0172 Seryl-tRNA synthetase - Prom 161955 - 162014 5.4 + Prom 161877 - 161936 9.0 150 75 Tu 1 . + CDS 162158 - 162310 93 ## - Term 161980 - 162032 12.1 151 76 Op 1 40/0.000 - CDS 162264 - 163445 1319 ## COG0642 Signal transduction histidine kinase 152 76 Op 2 . - CDS 163435 - 164124 831 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 164160 - 164219 13.1 Predicted protein(s) >gi|237663590|gb|GG668928.1| GENE 1 21 - 248 120 75 aa, chain + ## HITS:1 COG:BH3551 KEGG:ns NR:ns ## COG: BH3551 COG0582 # Protein_GI_number: 15616113 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus halodurans # 2 75 301 374 378 77 52.0 4e-15 MFRLLCKKAEVQNITVHGLRHTHATFLIEAGANIKYVSTRLGHKNINITLDVYSDVLKEE EKETADLMDKLIENL >gi|237663590|gb|GG668928.1| GENE 2 460 - 900 464 146 aa, chain + ## HITS:1 COG:BMEII1016 KEGG:ns NR:ns ## COG: BMEII1016 COG0693 # Protein_GI_number: 17989361 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Brucella melitensis # 7 141 89 224 235 133 47.0 1e-31 MLYHSLEEIEPDEYAAIYFTGGHGVMWDFPDNPQLQAITRSLYEQGKYLTSVCHGIAGLL NVKDASGNYLIADKTITGFTTAEEILAMKKAVVPFLNETIAKEHGATFAKKRPYKEFAYQ DGLIITGQNPFSVRAVAKLLIQQLSK >gi|237663590|gb|GG668928.1| GENE 3 991 - 2442 1380 483 aa, chain - ## HITS:1 COG:SPy1543 KEGG:ns NR:ns ## COG: SPy1543 COG1288 # Protein_GI_number: 15675441 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 462 1 478 497 285 37.0 2e-76 MAEKKKKNKKQLSSFSILFIILIVLGIVTVLLNGQPFTPREIDGKMVDHVVGAKLSDIIM APFNGFKDAIEINIFILVLGGFLNIVTQTGALEAGIQSVVKKLKGNELKIIPILMILFSI GGSTYGMAEETIPFYGLLSATMVAAGFDTFVAVGTVLLGAGSGVIGSTVNPFSTGVAMDA LRGIGIQPNTGIILIVGAILWAASTSYSIFIVMRYAKKVKADKGSTILSLQEQEDMEKTY GQAASKEMPFTNRHKKILMVFAFCFVVMIVSLIPWNDFGVTIFKGWTSVLTGNSFGDWYF GDLAMWFFLLGIIAALIGRFTEKETIEAFIDGAKDMLSVVLIIVVARGASVLMSKTYLDS FILDKAAGLLQGLSPVLFVIGAFVLYLGLSFLIPSTSGLAYVSIPVMGALAKNIGLSPEV MVMIFASGCGLINLITPTSGVVMGGLEISKVQYATWTKFMAKPMIVLGLINLIILIGAML LFS >gi|237663590|gb|GG668928.1| GENE 4 2490 - 3179 446 229 aa, chain - ## HITS:1 COG:SPy1548 KEGG:ns NR:ns ## COG: SPy1548 COG0664 # Protein_GI_number: 15675445 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Streptococcus pyogenes M1 GAS # 12 224 15 222 226 139 36.0 3e-33 MIEKIITKNNQDFQYFSESELTELRNESFVRSYKKGQVLFYPGDPRNHLILLVSGVIKIE KNDRSGNFSYLHFMKKQALFPRIGLFQDEVHYDSAIAYTDIEVVFVPVKLFERFLQNNPQ QLIHWIQEQSVLLKESMIKIQKGTTNDACERIVTSLAMLLNDLGERIDNRERVAIACPIT INDIARMSGTTRETASSVMKKLVQMNRISYSHKFLTFLDTPFFIDRLSN >gi|237663590|gb|GG668928.1| GENE 5 3207 - 4139 1157 310 aa, chain - ## HITS:1 COG:SPy1541 KEGG:ns NR:ns ## COG: SPy1541 COG0549 # Protein_GI_number: 15675439 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Streptococcus pyogenes M1 GAS # 3 295 4 301 316 355 66.0 8e-98 MGKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLL QQQAADSEKNPAMPLDTCVAMTQGSIGYWLSNALNQELNKAGIKKQVATVLTQVVVDPED EAFKNPTKPIGPFLTEAEAKEAMQAGAIFKEDAGRGWRKVVPSPKPIDIHEAETINTLIK NDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCINYGK PDEKQLTNVTVAELEEYKQAGHFAPGSMLPKIEAAIHFVESQPNKQAIITSLENLGSMSG DEIVGTVVTK >gi|237663590|gb|GG668928.1| GENE 6 4245 - 5264 1455 339 aa, chain - ## HITS:1 COG:SPy1544 KEGG:ns NR:ns ## COG: SPy1544 COG0078 # Protein_GI_number: 15675442 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 339 1 337 337 551 78.0 1e-157 MNSVFQGRSLLAEKDFTRAELEYLVDFSIHLKELKKKGIPHHYLEGKNIALLFEKTSTRT RSAFTTAAIDLGAHPEYLGANDIQLGKKESVEDTAIVLGSMFDGIEFRGFSQEVVEDLAK YSGVPVWNGLTDQWHPTQMIADFMTVKENFGRLEGITLVYVGDGRNNMANSLLVTGAILG VNVRICAPKELFPSDEVVNYAKEFAKESGAELMITDDVAKGVKGANVLYTDVWVSMGEED KFEERVNLLKPYQINMAMLEKTENMDGDLIVLHCLPAFHDTKTQYGEMVAEKFGITEMEI TDEVFRSKYGRQFEEAENRMHSIKAIMAATLGNLFIPRV >gi|237663590|gb|GG668928.1| GENE 7 5293 - 6519 1429 408 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149020061|ref|ZP_01835035.1| 50S ribosomal protein L33 [Streptococcus pneumoniae SP23-BS72] # 2 408 3 409 409 555 67 1e-157 MSHPINVFSEIGKLKTVMLHRPGKELENLMPDYLERLLFDDIPFLEKAQAEHDAFAELLR SKDIEVVYLEDLAAEALINEEVRRQFIDQFLEEANIRSESAKEKVRELMLEIDDNEELIQ KAIAGIQKQELPKYEQEFLTDMVEADYPFIIDPMPNLYFTRDNFATMGHGISLNHMYSVT RQRETIFGQYIFDYHPRFAGKEVPRVYDRSESTRIEGGDELILSKEVVAIGISQRTDAAS IEKIARNIFEQKLGFKNILAFDIGEHRKFMHLDTVFTMIDYDKFTIHPEIEGGLVVYSIT EKADGDIQITKEKDTLDNILCKYLHLDNVQLIRCGAGNLTAAAREQWNDGSNTLAIAPGE VVVYDRNTITNKALEEAGVKLNYIPGSELVRGRGGPRCMSMPLYREDL >gi|237663590|gb|GG668928.1| GENE 8 6816 - 7304 464 162 aa, chain - ## HITS:1 COG:SPy2150 KEGG:ns NR:ns ## COG: SPy2150 COG1438 # Protein_GI_number: 15675892 # Func_class: K Transcription # Function: Arginine repressor # Organism: Streptococcus pyogenes M1 GAS # 1 146 1 139 145 77 34.0 7e-15 MNKQTRQSLIKKIIQTTVIHSQNELLRELKKREINVAQATISRDLWELKVVKALDESGEM RLTIFEQFTSLEERKKEQLIQAIREVVTKVERVAFLLVVHTLPDNATLFSAVLDEVSLCE KKCSVAGFDTVIIVSSSEEKAQELEQYFQQFIQPTPLSKSNA >gi|237663590|gb|GG668928.1| GENE 9 7548 - 8027 401 159 aa, chain + ## HITS:1 COG:lin1404 KEGG:ns NR:ns ## COG: lin1404 COG1438 # Protein_GI_number: 16800472 # Func_class: K Transcription # Function: Arginine repressor # Organism: Listeria innocua # 1 152 1 145 149 96 35.0 2e-20 MNRLKRQTMIKRLVTENEIHTQSELLALLEKENIHTTQATISRDIRELNLNKVDNGQGEA YYRILNNSALRPKYKTDEERLVDIIIETGVSLTQIEFTNLLTVLPGNGQAIGVLIDRIRI HNPHILGCIAGDDTILILSKNKEDALEVNNYFQQYLYHP >gi|237663590|gb|GG668928.1| GENE 10 8183 - 9505 190 440 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 251 437 40 232 329 77 26 3e-13 MEIVNLKSKNSGEVLTRYNIATQVQSILTRLVLSLFLEFFIALAGGAILFVISKELFSIT LGIFFSYLLITILFIKPLNKVNTKIIDINSRTITSLNEILNGYETVKVFQLENFFTRKFL KNAKKLTSQEKISVIYQNVQSSIIILIESVGTLCVLWQGGILVINGGISIGLLIAYISLI TYFTSPVKNIIEYQKEIQNVVVMVRKLNDIIHVTKEETESIAKQIDFNNSKKLSVKKLRF SYGATSYVLKDFSEEFYFGKTYGIYGKNGSGKSTLSNILASLYKPDQGHIYLGNNDIFNN ISSYRKDVIQITSRPFIMAGTVKENLFLEADSFDDEYIYDILKNIGLEEVINSFPLGLDT VIAEGGINLSSGQKQKINLARALLRKPKILILDEAMSNLDQSSKRKILEYIRDTLPKSLR IYIAHDEKSLDFVDEKIILN >gi|237663590|gb|GG668928.1| GENE 11 9784 - 10212 232 142 aa, chain - ## HITS:1 COG:MTH1653 KEGG:ns NR:ns ## COG: MTH1653 COG3271 # Protein_GI_number: 15679648 # Func_class: R General function prediction only # Function: Predicted double-glycine peptidase # Organism: Methanothermobacter thermautotrophicus # 6 100 99 183 321 59 33.0 2e-09 MTAKELTKTSESGTTIQGILDGSRKLNLNPEGLEGNWAELIEGIQNNEIHLPFIAHIITK SGLAHFVVVEAINKKHIKIFDPALGILKQELKDFQSTWTGRIVNFDIDKIKNSVPKMKNH NFYYESLKQEKGTLSIVLFFQS >gi|237663590|gb|GG668928.1| GENE 12 10298 - 10864 233 188 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227518014|ref|ZP_03948063.1| ## NR: gi|227518014|ref|ZP_03948063.1| hypothetical protein HMPREF0348_0997 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0997 [Enterococcus faecalis TX0104] # 1 188 1 188 188 277 100.0 2e-73 MFINLWITVFVRLYFYVYLFKKSQEKDAQNISPIFHLFNNDTSEELIFLLAMLEVSLLVL IIALFLFFIFYIVMQLKRRFLLSQQELQIKTSLGCSPLQLTKEFCLKLLTGTWIGSGIGI SITSISYFYLYDFLIDTRAQVFLITPFNFFLFYDLKLFLGVLIFCGIQFIFVYQKVISKY FKIGGRYV >gi|237663590|gb|GG668928.1| GENE 13 10927 - 11592 282 221 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 6 216 20 222 223 113 36 6e-24 MIDVKVLTQKNFFLYQIDFVEFSSKEVSFIIGKSGVGKSTLLNILAGEHPYFTGEFVLDE KKVCLDTRKKLISYRRSIGYVHQDFQLIEWLSAYENIAYPLKIKKIPSQIIKKQVEKLAV ELKITELLHTRISLLSGGEKQRVAIARAIIKNPELILADEPTGNLDPDTSKKIMNILYRV SNKYNIPLIVVTHDYDQIPSIKKKIYEITEKKLNEVIEVEN >gi|237663590|gb|GG668928.1| GENE 14 11620 - 12081 340 153 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227518016|ref|ZP_03948065.1| ## NR: gi|227518016|ref|ZP_03948065.1| hypothetical protein HMPREF0348_0999 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0999 [Enterococcus faecalis TX0104] # 1 153 1 153 153 261 100.0 9e-69 MKNMKVLYNILALLVITGCATPESLVHKQDDDSAIDVVETYSEAEQIAFPYYYVQLVEVS RLKKEANNSIKLTLNLLNDGVPQNTQIKDIFSVKALQGEVNLKNLSTKIEGDKFLKTSTV VVEFLLVSDEEVIFEFTSTYKEQIKKHYSVFLE >gi|237663590|gb|GG668928.1| GENE 15 12168 - 12317 177 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227518017|ref|ZP_03948066.1| ## NR: gi|227518017|ref|ZP_03948066.1| hypothetical protein HMPREF0348_1000 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0345_2824 [Enterococcus faecalis ATCC 29200] predicted protein [Enterococcus faecalis AR01/DG] hypothetical protein HMPREF0348_1000 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0345_2824 [Enterococcus faecalis ATCC 29200] predicted protein [Enterococcus faecalis ARO1/DG] hypothetical protein HMPREF9519_00774 [Enterococcus faecalis TX1346] # 1 49 1 49 49 89 100.0 9e-17 MKKINETVAREVKAGFHWHCWLCNAGGGSKAGYLRHVQVYNHIFVSYWR >gi|237663590|gb|GG668928.1| GENE 16 12566 - 13480 670 304 aa, chain + ## HITS:1 COG:lin1226 KEGG:ns NR:ns ## COG: lin1226 COG2267 # Protein_GI_number: 16800295 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Listeria innocua # 1 304 1 304 306 204 38.0 2e-52 MTEQFILTSNDQQTQLNVRHWPCPSPKAVVQLIHGMAEHIQRYDEFARFLNQLGFAVIGH DHLGHGESVQPSSPIYGFFGEQGPENVVTDIHQVKQWAMNHYPQLPYFMMGHSMGSFALR NYLQDYPVTMQGVIFMGTGTSPLPLTAALPFIKKMAEKQPKKPAPFIDKLAFGSFSKKFP EASSFNWLSKNQANVADYENDPLMGFVFTNNGFATLFSLVKRANQRNWYQAIPKELPILI ISGAEDPVGDFSKGPAKIQKQLKHAGFQHVTLRLFPTLRHEILLETEKATVFQEIGHWLT DLTK >gi|237663590|gb|GG668928.1| GENE 17 13517 - 14788 1327 423 aa, chain - ## HITS:1 COG:SPy1742 KEGG:ns NR:ns ## COG: SPy1742 COG0172 # Protein_GI_number: 15675591 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 422 1 422 425 609 70.0 1e-174 MLDMKKIRQNVEVVQKKLKTRGVDEEVLLRFLALDEERRALLVKVEELKKHRNQVSGEIA QLKRAQKDASQQLLNMQEVSEQIKVLDQEVVHLQEQCTAIAERLPNLPHESVPVGADEAA NVEVRRWSTPKTFSFEPKPHWEIGEALGILDFERGAKVSGSRFLYYKGLGARLERAVYNF MLDQHVNEHGYTEVIPPYLVNSKAMFGTGQFPKFKEDVFQVAESDLTLIPTAEVPLTNYY NNEILEAQELPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSDAEHSYEELE KMTNNAGDILEKLGLPYRVITLSTGDMGFSAAKTYDLEVWIPAQKTYREISSCSNCEDFQ ARRALIRYRDKTGQVQYAHTLNGSGLAVGRTVAAILENYQNEDGTVTIPEVLRPYMGGLT KID >gi|237663590|gb|GG668928.1| GENE 18 14815 - 15708 1233 297 aa, chain - ## HITS:1 COG:SA2318 KEGG:ns NR:ns ## COG: SA2318 COG1760 # Protein_GI_number: 15928109 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Staphylococcus aureus N315 # 1 289 1 289 299 304 62.0 1e-82 MYLSIEEFIDKAEKTGKKISDLMIEQEMERSQKSYEEIWTQMGQNLDVMDAAVKRSQEGA GVFSPTGLTGGDAARLKKYRAAGKTLSGDLMMSAVQAALGTNEVNAAMGVVCATPTAGAS GTLPGVLTAIKNTLNLTRDQQIRFLFTSSLFGMVTANNAMIAGAVGGCQAEVGSASAMAA AAAVEAAGGTPRQSSEAFAMALGNLLGLVCDPVAGLVEIPCVKRNTVGAGNALIAADMAL AGIVNKIPADEVVEAMNKVGRQLPRELRETGLGGLAGTATGQRMKNEIFEKVKFTIV >gi|237663590|gb|GG668928.1| GENE 19 15723 - 16430 822 235 aa, chain - ## HITS:1 COG:BH2497 KEGG:ns NR:ns ## COG: BH2497 COG1760 # Protein_GI_number: 15615060 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Bacillus halodurans # 17 212 1 195 220 164 44.0 1e-40 MNTAMAINKPKKVNKVMNYKSCFDIIGPIMIGPSSSHTAGALAIGLAARKLFGGTPEKIV IKYYESFADTHKGHGTDFAIIGGILGLAADDANVTQSIELAEEQGIEIQFLEMSEESPVK HANTACVTLSDATHEIHLTGISVGGGTIEVKYIELDGFNVQLHGPLPILLVINQEEQAMQ AFKDTLQKNNIQVNAVSRYVEGDQILFIFDLDSAPISSVKEQLFSLDDTSKIILL >gi|237663590|gb|GG668928.1| GENE 20 16405 - 17511 1421 368 aa, chain - ## HITS:1 COG:SA2320 KEGG:ns NR:ns ## COG: SA2320 COG1299 # Protein_GI_number: 15928111 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Staphylococcus aureus N315 # 1 333 1 333 347 275 49.0 9e-74 MKTLSGILMLVLVLCGMSLFSFKAPRGKKSLSALSGAACATFLPEAFLRYAVGGVFHLDY VSQIGETMGSLGGLAAGALVPLAFGISPVFSIILGLSLIKVSLLPAFITAYLLSFVVEQM QKRIPEGIDLLVVILVIPVAASLVAGFIQPVVLGVLEVIGGTILSAVDGNPYVMGAILGA IIPIVGMTPLSSMVLTALIGLTGVPMAVGALTCYGSSIVNAALFKKLKLGTASTPLAVAI EPLTQVDIISSNPIPIYATNLFSGMVSGIVVTFFGLKVPVTGMATPWAGLLVTLGNNAIQ TTLLAVAIITVVSLMFGFLGALVFKRYRIEAVDNTPEFEGTTEVTSEKEKEAVKTKGGVT YEHSYGHQ >gi|237663590|gb|GG668928.1| GENE 21 17768 - 18448 759 226 aa, chain + ## HITS:1 COG:VC0355 KEGG:ns NR:ns ## COG: VC0355 COG2964 # Protein_GI_number: 15640382 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 7 225 23 237 240 172 38.0 6e-43 MESYLRLSEVDKQILHSHALMLDGLGNFFGSTHEVILHSLENLESSAIKVINGHFSNRKE GAPITDMALKMLSQVESEHDYAVKPYYNKNQKGVILKSSTIPVIGENDRIIGLICINMHL EMPLIDYLQDLLPSGQQNDMSQELKNSEHFSDNIDELITTSLTKVKQAVESDPNVSHLNQ NKEIVIRLYDQGIFNLKDSVIKIADRLGISKNTIYLHIRNHKKEEA >gi|237663590|gb|GG668928.1| GENE 22 18507 - 19292 739 261 aa, chain - ## HITS:1 COG:no KEGG:EF0095 NR:ns ## KEGG: EF0095 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 261 1 261 261 388 98.0 1e-106 MKKIVLFSMLTFSVLSLSLAGCGNKKTASTNDSKPKQETKKATQKSSSQQEMKNSHSSVT GQNSNVAGENPSENAAQPSAGTDETNEVPQNQAPDTNITITNAVFNPERNEINGTTLPNA TITATVVGDASAQAGVFYADANGNFTVISPRAGATTQLIATVDQRNSAPVQIDIPSSGQE AALSFSNITIDPKQGTISGKTAPNATILVSRADDARVILASFTADAQGNFTASNLVPGTK NRLDVTLNGEIGTPYLFDLPN >gi|237663590|gb|GG668928.1| GENE 23 19448 - 20209 929 253 aa, chain - ## HITS:1 COG:L195318 KEGG:ns NR:ns ## COG: L195318 COG2116 # Protein_GI_number: 15672950 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Lactococcus lactis # 1 253 1 253 264 317 64.0 1e-86 MYTPDEILSISIENGQKKIQKPLVAKLILGFIGGAMISLGYLAYVRVSASIPADLASVQA LVGAAVFPIGLIVILMAGGELITGNMMAVSTAWFAKKVSFRELIVNWVTITLANIVGALF VAYFFGHYLGLTSSGAYLNQVLSLAEHKVAATWLQAIISGIGCNWFVGLALWLCYGAKDA AGKLLGIWFPVMIFVAIGFQHSVANAFIIPAAIFEGGVQWGDFFRNFIFVYLGNIIGGAI FVSGFYYLSYRKH >gi|237663590|gb|GG668928.1| GENE 24 20709 - 20915 296 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKAARQARQVRAVVQGKAARQAQLAKQVVQGKAVLQLRQVNQAIQMKVTLQVRPAQPTVQ ARVAPQAL >gi|237663590|gb|GG668928.1| GENE 25 21028 - 23277 2127 749 aa, chain - ## HITS:1 COG:no KEGG:EF0093 NR:ns ## KEGG: EF0093 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 736 1 736 1055 1341 96.0 0 MKKTMLILLFGLLTVAGLPMVTEAVEPVNATDATIFGAQAMVPNSAEDQTDKLQALLSQT AKEGQALFLPQGSYALSKDIAISSNYQLIGDTTGATILHNATGAPIQLTDTTYGTKTNVR LQNIAFDGINVTLKLTNQLILANNIFYNPLKGFVVNLNADIGVKISGNIFMRDTAHMQPG IDFNRAIYIGGYSTPSRFQYMSDVDIVDNLFGLKVTELDAIKSTSRSDLAATITRLQTAI EAGAISVPNEQNYLSTGVNSYSMLKDVTVQHNFFYSPYDNENLNGLGGDHAIYFRGAQNI TVVGNHLRGLQNGPAGGFKFKSGRNITIMNNYLRNTGLIMYGTPEIGLAETQAEGAISEL SNWLVANNIFDWKYWDNQYAIGMEYNRHTGNNNVFNGVFINNQFVNYHNIPQNRRRELLI ASGGGFRPETSFVKDNTRDDGLKNGQLLVENWTEADYRLMPATWESLISPTLYEQYKNTP IPVRNTLATPVATTIVQGQSIDPQQLVANTNDADEAVPTAKIVNPEVLNEIGQQKVTVQL TYETGSLVTVNVPVTVEAPVKKLDLSRLQTVYASIGEANQYTVYSWQLFTAIGPKTIVPS YYQQATQLLAEGQVSGDKTQEQVDQLTSNLQSAMKVLVKKADITLERAEAEKELASVHKL DESVYTTDSWQAMQEALVDTTTGEESPKQLQKLLAWSDEELLEPTLGGFKTPVDAQKRIN QLTQTIKTALLLLVEKSTETTSNTSESNS >gi|237663590|gb|GG668928.1| GENE 26 23292 - 23531 310 79 aa, chain - ## HITS:1 COG:no KEGG:EF0092 NR:ns ## KEGG: EF0092 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 79 1 79 79 115 93.0 7e-25 MKKRMEQIEEILGCEENSAGVRLKELVEALELEVTNQNLLKVTSVLHMNPRFKKIYAYED SRVITLYQLLQNKPLEVTE >gi|237663590|gb|GG668928.1| GENE 27 23871 - 25376 1326 501 aa, chain - ## HITS:1 COG:no KEGG:EF0091 NR:ns ## KEGG: EF0091 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 501 1 501 501 910 96.0 0 MKWDEYVDIFDTDVVSKIIILRNLPINEGWIDINELAEELQLNKKSVKKYVELLKDDITY YAVDNDVSLAFEKGHGYRLNLASTQAFQKLYTAIFQDSLTYQVMEDLFWGRFNGIVPATT KYHTSDATIRRLLKGFTEILAPLGLVINKSTWKIEGNEAYLRHFAYTIFMDLIRDTWPFD YIQETEVAQTVQKVMAFFNVEVAETVLRRVKYMVAISKVRSAQGAEYRPSAEQETYLEGN KHYQAFIEEMTATTLFLNKNDLTFVYFFLLANDQFYQDEATAQAILAHFDESEAPVYMLT HLVQHFLLEEIQMTPQLEKIRPQIFYYLFATHLFAELYYVQNVKMYNVFWNKVKEKYPVL LEELSKGLNQLYEQTGNELFTNKEFLALRYSSVLALSNDLIHREQKIVLGLKSGLPVLEE ERVKLSIENNFRRFYALEVLRYSEASKEDWQNIDLLLVTSLTDVETGHPEIFLLSSELTF EQYNRLNQKIVKINEKRTRSL >gi|237663590|gb|GG668928.1| GENE 28 25458 - 26369 996 303 aa, chain - ## HITS:1 COG:SPy1158 KEGG:ns NR:ns ## COG: SPy1158 COG1597 # Protein_GI_number: 15675134 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Streptococcus pyogenes M1 GAS # 1 295 1 300 303 187 32.0 2e-47 MKKMMVLYNETSGSSESKEIAERFKKAAEAKGEAVILQPSNPDIDPEEMRKNAKENQVGV LVVIGGDGTIHHAVQNFKDTIRDYQIGIIPGGTVNNFARVLSIPLKEEDAFETILAGKTT PVDFGMVNQDVMISTLTIGLLADTAANVTQQEKQKYGPLAFTKQFFRLLVKKKKYKLKID GDERRWHGKAQLLTMTMTNSAGGFTNFDANATPDDGEVHIIILPKLVFYKFVYYLPKIIR GQLNEIPGVVYFSGSQFKIRGEKDKKVQTRTDGDPTDDLPIKVTVEAWGLNVFVPETSTS TKE >gi|237663590|gb|GG668928.1| GENE 29 26655 - 32753 7016 2032 aa, chain - ## HITS:1 COG:L148778 KEGG:ns NR:ns ## COG: L148778 COG4932 # Protein_GI_number: 15672133 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Lactococcus lactis # 15 2031 11 1982 1983 1162 37.0 0 MRKNGPMVNRWLYGLMCLLLVLNYGTPLMALAEDVNSDGQLTLGEVTQTSQQEMTLALQG KAQPATQEVVVHYSANVSIKAAHWAAPNNTRKIQVDDQKKQIQIELNQQALADTLVLTLN LTATEDVTFSYGQQQRALTLNTGTDPTESTTITSSTVTTANEGSTEEASANSSVPRSSEE TVASTTKATESKTTESTTVKPRVAGPTDINDYFTGDETTIIDNFEDPIYLNPDGTPATPP YKEDVTIHWNFNWSIPEDVREQMKAGDYFEFQLPGNLKPNKPGSGDLVDTEGNVYGTYTI SEDGTVRFTFNERITSESAIHGDFSLDTHLNDSDGRGPGDWVIDIPTQEDLPPVVIPIVP DTEQQIDKQGHFDRTPNPSAITWTVDINQAMKDQTNPTVTETWPTGNTFKSVKVYELVMN LDGTIKEVGRELSPDEYTVDKNGNVRIKGDTNKAYRLEYQTTIDEAVIPDGGGDVPFKNQ ATLTSDNNPNGLDAEATVTATYGKMLDKRNIDYDETNQEFTWEINYNYGEQTIPKDQAVI TDTMGDNLTFEPDSLHLYSVTFDDKGNEVVGAELVEGKDYKVVINDDGSFVIDFLHDVTG AVKIDYKTKVDGIVEGDVAVNNRVDVGTGQHSEGDGTANQQNIIKNTGAVDYQNSTIGWT LAVNQNNYLMENAVITDTYEPVPGLTMVPNSLVVKDTTTGAQLTLGKDYMVEITRNAEGE TGFKLSFMGAYAKTSDAFYVTYNTFFDVTELDANNPALDHYRNTAAIDWMDEAGNNHHSE DNKPFKPLPAFDLNAQKSGVYNAVTKEITWTIAVNLSNNRLVDAFLTDPILANQTYLAGS LKVYEGNTKPDGSVEKVKPTQPLTDIKMEEPSEKNKNTWRVDFPNDSRTYVIEFKTSVDE KVIEGSASYDNTASYTNQGSSRDVTGKVSIQHGGESVKKGGEYHKDDPDHVYWHVMINGA QSVLDDVVITDTPSPNQVLDPESLVIYGTNVTEDGTITPDKSVILEEGKDYTLEVTTDNE TGQQKIVVKMAHIEAPYYMEYRSLVTSSAAGSTDTVSNQVSITGNGSEVVHGDDNGDVVV DIDHSGGHATGTKGKIQLKKTAMDGTTILAGAHFQIWDQAKTQVLREGTVDATGVITFGG LPQGQYILVETKAPEGYTVSDELAKGRVITIDEETSADGAQPTIIKNDVNKVILEKTDEK GKKLVNARFKLEHAVTTPFTHWEEVPLAPDRTNANGQLEVDSLKPGLYQFTEIEAPTGYL LDTTPKRFIVTQNTSGQIRDVHVKMLNYQGSAELIKKDQAGNPLAGAEFSVLDATGQVVR EHLVSDADGKVTVTDLAPGKYQFVETKAPVGYLLNTEPSTFTIAASDRGKPATVIATANF VNYQGAAKLIKKDVKGHLLSGATFKVLDAKGQTIQTGLTTNNQGEIVAEHLAPGKYRFVE TKAPTGYLLNTTPVPFEIAEKNAGEPAVVVASDNFVNYKGAFQIVKTNSADQPLAGAVFE LYDHNKQSLGITATSGKDGKIIFRDLAPGTYYYKEIKAPKLPDGSEYIIYPELVKVEIRG DFKGDPEIFQLGAFANFKGRAVFKKIDANANPLPGTIFKLYRIENGEKIFEREVTAEKDG SLAMDDLGAGSYELDEIDATDGYIVNKQPIYFVVKKNSNDKQPLDELEFVNYQAEVTGRK VNEQGQTLAGAVFAIYNADEQNQAQGSPITFLNRAGEKVSEITTDKTGEIYAKGLNEGHY VLVETKAPTGYLLDTTPHPFDVTAQLGKEQPIALGDLINYQGTAQLTKENETGEALAGAV FKVIDEAGQTVAGQTNLMSDKQGKVIAKNLAPGTYRFVETQAPTGYLLNETPSASFTIAK DNQGKPATVVLKAPFVNYQGAAKLVKIDQQKNALAGAEFKVTDAETGKTVARSLRSDNQG LVQVNHLQPGKYTFVETKAPDGYQLSKQAVAFTIAATAKDKPELVNAGTFVNEKQPVSKK TKPNQPTTKQVARETGWLGLPKTNTQVNYFFVLIGLLLVGLASWLFYKKSKK >gi|237663590|gb|GG668928.1| GENE 30 33465 - 34952 917 495 aa, chain + ## HITS:1 COG:no KEGG:EF0086 NR:ns ## KEGG: EF0086 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 495 1 495 495 885 96.0 0 MHNLLTKQEIQLLSLIEYLYDSKEKVPMQVLRRKYEFSHYNINNLLNQLTLLISRVNTHE NVHIRIINNQQSIELVADENIPIELMKEAVVRGSLTYMLALDLLLKRYTSAKDFCEEHFI NFSIFKQVSDRLNNYLARFNCYLNLKRREKICGAEKDFRSFFYSLFFISGTSLVPFLSKT NQTQLQNFIEIIKNRYPYFTYTDLRKLKLIMSIGLLRYQSDFTISDYPEIAAINLAIPYS EFQLLVNDCFINEQQEPDTWRAEIRFYYDFFSTLTMYSLEQMETINFANLAIMGMDNSPH VTWIFEKCTQLQLDLSAIEVVFLLVNLSNASERLIHFPVEEELSYEIANVSLYEKQYPNV SRTTNYFLKRLPFDKEHPLDALFKETIFLIIRSVLLNKQIPVKILLHSSINQIQENWLAK EINNYCDVPLKFVNHIQEVPDLVITDKNNPLFHASKTFYWHPVPYLDEYHNLKQVVRKIY FAKLRGENSLEGIGC >gi|237663590|gb|GG668928.1| GENE 31 34946 - 36430 1210 494 aa, chain + ## HITS:1 COG:no KEGG:EF0085 NR:ns ## KEGG: EF0085 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 360 1 360 367 601 98.0 1e-170 MLTELLDVPYRKSFALLEELLERREAEEQTLAISTLATQLKMQQTTILQSVALLQTEIEE NGWENLFSLSATAKEITFWFAPYFQLSFLMPYFVKKSFAYQVLTYAFNHNAIDSKHFEKV LEISSSTFTRKIGQLNQWLQKYQIEINLKRTNVLVGKEKDIRIFFMMLFWNNYSEEDWPL HTITKKEVHSLFRRLKHSVSFNTTQDFTKDLIFSAVILARWKEGFFIKETFVEEEAIVNP FVNLNEFELFFKEEALHQVPTKFIQKEGLFAFFLLTISVSYATQDILEIPAARMHMVQLL GSPIKEIIYQLTSFYQIKLTFHEYLYLYTSIQNLSVFFKTFVTIANPFVQESFLKEALQK NPSLYKDVKRLTIEMLPTLMGNEKLLVDCLFILFCTLKTKSLPPIRVLVRTNQSNLILDT LYEKLSKAVDKKLIFVASPEKPFDVIITNIFSEISVKSTIPTYYVDFSASIGELAQSLEN LNTQIVTKQSPRHF >gi|237663590|gb|GG668928.1| GENE 32 36402 - 36488 56 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLTYVPCLFLTLKMFHVKTFKSGVDFVW >gi|237663590|gb|GG668928.1| GENE 33 36639 - 36818 307 59 aa, chain - ## HITS:1 COG:no KEGG:EF0083 NR:ns ## KEGG: EF0083 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 59 1 59 59 77 100.0 2e-13 MPNDERILNVLQQTLTEIQRMNTRLAKIETELADVDQHHATLDHYLQELELVTENNNVM >gi|237663590|gb|GG668928.1| GENE 34 36839 - 38074 1404 411 aa, chain - ## HITS:1 COG:lin1217 KEGG:ns NR:ns ## COG: lin1217 COG0477 # Protein_GI_number: 16800286 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 8 391 4 386 401 466 67.0 1e-131 MTEQTPTKLLNKGFISITVINFIVYLVYYLLMVIIAVIAQDSLHATLGQAGLASGIYIIG TLLARLFMGKLLELIGRKQVLRYGALFYLLTTVAYMYMPSMGILYLVRFLNGFGYGTVST ATNAIVTAYIPKNKKGEGINYYGLSTSLAAGIGPFIGMLLLNVSNFHVIINFSIILILLT TIACFIFPVKNIELTPEHREALSKWNFDSFVEKKVLFITFIAFLMGLAYSSVLSFLSSYV KVIDLVDVSTFFFIVYAVVITLTRPSTGRIFDVKGERYVMYPSYIFLTLGLFLLSMTTSG WMLLVSGGLIGLGYGTFMSNGQAVCLQESPSPHRIGIALSTYFIGLDLGLGVGPYALGEL RNFMSFQQMYFLAGCIPIVCTILYMVFHKAKNDAKDLSLETIEEIEHGSEL >gi|237663590|gb|GG668928.1| GENE 35 38441 - 38683 467 80 aa, chain - ## HITS:1 COG:SPy1265 KEGG:ns NR:ns ## COG: SPy1265 COG2261 # Protein_GI_number: 15675224 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 79 1 79 82 68 69.0 3e-12 MGFIWALIVGGVIGAIAGAITKKGSSMGIIANIIAGLVGSTIGQAILGTWGPSLAGMAIV PSIIGAVILVAIVSWILGRK >gi|237663590|gb|GG668928.1| GENE 36 38707 - 39267 917 186 aa, chain - ## HITS:1 COG:SP1804 KEGG:ns NR:ns ## COG: SP1804 COG1302 # Protein_GI_number: 15901633 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 186 1 184 202 167 55.0 1e-41 MSNEKFNNVPKPAGNGPHTPENHAIKGELTFEDKVVQKIIGLALENVDGLLTVDGGFFSN IAEKLVNTDNVTAGIDTEVGKKQVAVDMDIVVEYGKDIQDIYEKMKELISREVKKMTHLD VIEVNVNVVDIKSKEEYEEDSETVQDKVTGAAKSTGEFASEQTEKAKKAVNKGTEQVKEN MEPRVE >gi|237663590|gb|GG668928.1| GENE 37 39326 - 39838 724 170 aa, chain - ## HITS:1 COG:SP1804 KEGG:ns NR:ns ## COG: SP1804 COG1302 # Protein_GI_number: 15901633 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 9 170 23 184 202 149 51.0 2e-36 MENANVSIVKGELTFEDKVIQKIIGIALEEVDGLLTVDGGFFSNLRDKMINSEDVTTGIH TEVGKKQVAVDMDIVAEYGKDIETIYDQMKEVITREVQQMTHLEVIEVNVNVVDIKTQAE YQEESETVQDKLGNAAEATGSFMSKQTNKAKHAVTKGKTKVKENTAPRVQ >gi|237663590|gb|GG668928.1| GENE 38 39851 - 40042 267 63 aa, chain - ## HITS:1 COG:no KEGG:EF0078 NR:ns ## KEGG: EF0078 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 63 1 63 63 79 100.0 5e-14 MVEWIKQYAVPLIGGLVGLVFAILFLSIGFFKTLLVVLLTGLGIWLGLYLEQTGIVKNYF HHK >gi|237663590|gb|GG668928.1| GENE 39 40055 - 40627 651 190 aa, chain - ## HITS:1 COG:no KEGG:EF0077 NR:ns ## KEGG: EF0077 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 190 1 190 190 315 100.0 5e-85 MNKVVKILLLLGSLILMALFGAVAITTWSADTAWQPPDNVQWFLQDNEYARQAIFWVALV LLGIMLFLFLFILLFPRRKGTFELKEEQGKLVLHRKAIEGFVRSSLQDSDFLEAPTIRVK ATKRRIKVNVKGTLKRTADLIGQTEAWSKTMEERLARLVGTGHKITIDVHFEDIQSMKRP QQQQTQARVE >gi|237663590|gb|GG668928.1| GENE 40 40640 - 41533 1090 297 aa, chain - ## HITS:1 COG:BS_yhxD KEGG:ns NR:ns ## COG: BS_yhxD COG1028 # Protein_GI_number: 16078107 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Bacillus subtilis # 1 292 1 295 299 341 59.0 9e-94 MTEPNLKDPRKLFYSDGFPQQDQETPALQDKMVPKPDCGEDSYVGNHKLENRRVLITGGD SGIGRAAAIAFAREGADIALHFFPGEEKDAEEVAHYIREAGRKVFLLPADLRDKQAPEEL VAQAREALGGLDALVLNAAQQISCAAIEELPMEQVIDTFHVNIIAMFGIVKAAVPHLPAG SSIVTTTSVQAFNPSEHLLDYAATKASIANFTVGLAKQLAPKGIRVNGVAPGPIWTPLQL DHGQPIEELPEFGQHSLLERAGQPAELAPVYVFLASNDASYVTAQVYGVTGGEAINL >gi|237663590|gb|GG668928.1| GENE 41 41807 - 42460 727 217 aa, chain + ## HITS:1 COG:lin1218 KEGG:ns NR:ns ## COG: lin1218 COG0664 # Protein_GI_number: 16800287 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Listeria innocua # 2 216 3 218 219 275 64.0 6e-74 MRNVLQDYLDEHSFRVVVKKKKNYLTYEGLQDRYAYILKSGIIKTSVISKDGREFNLRYI NNLEIVSLLRDEYSEFIDAPFNIRIESPQAELYQIDRVQFWRDINNSKDLQMYVKEYYRD RLMHSMKKMQQMLMNGKFGAVCTQIYEMYDSFGVETEEGILIDFVVTNEEIAHFCGITSA SSVNRMMQQLKELGAIELRNRKILIKDLDMIRDNIIV >gi|237663590|gb|GG668928.1| GENE 42 42502 - 43419 764 305 aa, chain - ## HITS:1 COG:no KEGG:EF0073 NR:ns ## KEGG: EF0073 # Name: not_defined # Def: Cro/CI family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 305 1 305 305 528 92.0 1e-148 MDVLEALKYFRKKKKIAQKDVLPKKGKQTYRRIEIGEAKLSYEDLMTALQSLGITFNEFF HMVSETRSRASSKIMHQIECCQMGVNNTSEKKNLIHYFYQLERNPHKNAVEMSIYTDIKL TFSNDWEEIPEFDEPDRMAILALISSKSYYTYYDYQMVTNTGALFSENEVLQILEQMFPV KDAELRDTQTLNVAYGFYLNIITAQLYKKNYAKAREYLALMSVTTIPAEIYYIHFNLRYL KNLTYYLYTGKMRFYKEVIAVIDMIESFGDVRLAEGMKKEMLQLTAGRTFNLDYGQFPVN IVTEK >gi|237663590|gb|GG668928.1| GENE 43 43605 - 43694 61 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKPNIATPPALSYIEFHYKTDILVSSRTN >gi|237663590|gb|GG668928.1| GENE 44 43965 - 46304 2486 779 aa, chain - ## HITS:1 COG:no KEGG:EF0071 NR:ns ## KEGG: EF0071 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 779 1 779 779 1467 99.0 0 MKGLSKKKRVSTWLALGITVVSCFALSGEVQASIERTKVDEFANVLDVSASPTERTNGVY DTNYFNNFSDLGAWHGYYLPEKSNKELLGGFAGPLIIAEEYPVNLAASLNKLTVKNKKTG ETYDLSQSNRMDLSYYPGRLEQTYELDDVTIHLALIFVSNRTALIQTTLENTGEDPLSLE ASWTGAVFDKIQEGTETLDIGTRLTAKDNDIQVNFGEVRETWNYFATKDTKYTIHHADKV STKIDNRNYTATAEPIELKPKQTYNTYTTESYTFTKEEEAKEQQQAPEYTKNAARYFKEN KQRWQGYLDKTFDQKKTAEFPEYQNALVKSIETINTNWRSAAGAFKHDGIVPSMSYKWFI GMWAWDSWKADVATADFNPELAKNNMRALFDYQIQKDDTVRPQDAGAIIDAVFYNQDSAR GGEGGNWNERNSKPPLAAWAVWHIYQETKDKEFLKEMYPKLVAYHNWWYTNRDHNKNGIA EYGSMVSDAHWQKDDKDQIIKDKNGQPKVDDDAVIEAAAWESGMDNATRFDKEGVGKGDD GVKVFENKNKGKVVGYSINQESVDLNAYLYAEKGYLASIAEELGKKEDYKNYQKEAKKLK KYIQENMFDEKTGFFYDLQINEDGSKTKLLVNRGKGTEGWLPLWAKVATKEQAAAVKKNM MNQEMFNTFMPFPTASKDNEKFAATKYWRGPVWLDQALFGVEALQNYDYTKEAKEMTQKL FLHAEGLMGEGPIHENYDPLTGKGLSTKNFSWSAAAYYLLYKNTLLSNNPTTQTAFEIK >gi|237663590|gb|GG668928.1| GENE 45 46323 - 46397 87 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIALYTLIYYQQGLCQTECIPFHY >gi|237663590|gb|GG668928.1| GENE 46 46483 - 47178 703 231 aa, chain - ## HITS:1 COG:BB0644 KEGG:ns NR:ns ## COG: BB0644 COG3010 # Protein_GI_number: 15594989 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Borrelia burgdorferi # 4 228 6 229 232 245 58.0 6e-65 MNKEIKGALIVSCQALADEPLHSSFIMSKMALAAKQGGAKGIRANSVVDIRAIRKEVDLP IIGIIKRDYPDAEVYITATMREVDELMAVQPEIIALDATHSKRPNGETLATFFKRIKEKY PNQEWMADCSTLEEMIEAAELGFDYIGTTLVGYTPQSENQRIEQNDFELLREAKKHFTTP IIAEGMIDTPAKVQRVLELGAYSVVVGSVITRPQKITEKFVEATKIKQNQA >gi|237663590|gb|GG668928.1| GENE 47 47323 - 48339 1310 338 aa, chain - ## HITS:1 COG:SP0259 KEGG:ns NR:ns ## COG: SP0259 COG2255 # Protein_GI_number: 15900193 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Streptococcus pneumoniae TIGR4 # 6 334 3 331 332 466 71.0 1e-131 MTEEERLLSAASQEAEASIEKSLRPQFLAQYIGQDKVKQELTIYIEAAKNRNEALDHTLL YGPPGLGKTTMAMVIANEMNVNIRTTSGPAIERAGDLVAILNELEPGDVLFIDEIHRLPR VVEEMLYSAMEDFYIDIMVGQGTTAHPVHFPLPPFTLVGATTRAGMLSAPLRDRFGIISH MEYYQEQDLKEIVLRSADIFQTEIFEEGAFEIARRSRGTPRIANRLLKRVRDFAQVQSDG KIDRAIADKALTLLQVDHQGLDYVDQKLLKTMIDLYGGGPVGLSTLSVNIGEETETVEDM YEPYLIQKGFIKRTPRGRIATPFAYAHFGYDYLEGHKN >gi|237663590|gb|GG668928.1| GENE 48 48352 - 48966 804 204 aa, chain - ## HITS:1 COG:L0266 KEGG:ns NR:ns ## COG: L0266 COG0632 # Protein_GI_number: 15674189 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Lactococcus lactis # 1 203 1 197 197 190 53.0 2e-48 MYEYIIGKVTFVSPYYIVVETNGIGYQISVDNPYRYSGKMDTDIKLYLHQVVREDAQLLF GFGSLDEKQLFLKLISVSGIGPKSGLAIMASVADHGGLINAIEGEDVTYLTKFPGVGKKT AQQMILDLKGKLGELESSEAAVAAMTATEAVTTSNQALAEALEALSALGYSDREIKRITK QLEALGETTTDVYLSNALKFMMKR >gi|237663590|gb|GG668928.1| GENE 49 49185 - 50171 1255 328 aa, chain + ## HITS:1 COG:BS_yceB KEGG:ns NR:ns ## COG: BS_yceB COG2141 # Protein_GI_number: 16077357 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Bacillus subtilis # 20 328 3 313 313 233 42.0 4e-61 MKLSILDQLTVPKNQSASDTLQEAKELAQLAEKLGYTRIWYAEHHGSDAFASATPEILVA HIASATEKIRVGAGGIMTMHYAPFKVAETFKTLVALYPDRIDLGMGRSPGGSPLTTLALN NGQPPQLDQFDKLPEILLFLKEEFPEDHLYSKISAVPREVLLPQPWLLGASKESARSAGE YGINFSFAQFIHGHLPKEVLSAYYKHFRPVTEQQEPQVSAAYFTFAADTKEEAEYHAASF EHYIFATEHGLPNKFLSPEEALAFPYSEMDKLVLEQNKQRFVIGSSQEVAEFFHQQEELG LTEAMLITPGYDKQTRFQSFERLAKELL >gi|237663590|gb|GG668928.1| GENE 50 50186 - 50410 363 74 aa, chain + ## HITS:1 COG:no KEGG:EF0064 NR:ns ## KEGG: EF0064 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 74 1 74 74 104 100.0 9e-22 MLEVLKRINTLAQKEREQGLTSEEQALRVDLRQEYLRTIREQFNKTLMGVTIYDPTGEDV TPEKLKEEQQKYFD >gi|237663590|gb|GG668928.1| GENE 51 50459 - 52138 1974 559 aa, chain - ## HITS:1 COG:lin2300 KEGG:ns NR:ns ## COG: lin2300 COG4166 # Protein_GI_number: 16801364 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Listeria innocua # 22 558 22 559 559 421 41.0 1e-117 MKSKRIKGLIGLSLTTLLVLAACGGDGGAGAEKAKGGSEKTAAKQEFKVVVQQEMPSADL SLGTDTISFTALNNAYEGIYRLDDKSKPQPAGAKEKVQVSDDGLTYTVKLREEAKWSNGD PVTAADYVFSWQRTADPQTGAEYAYFLEMIENGADIVAGKKPVSELGIKANGDYELEIKL AKPTPYFDYLLAFPLFFPQHQATVEKYGKDYAASSEKAVYNGPFVLANFEGAGSDTNWTL EKNENYWDKDNVKLDKINFDVVKEAPTALNLFQDGQADDVILSGELAQQMAKDPELVIEK EARTSYLEFNQRDKNSPYNNVNLRKAISAAIDRNALVDKILGDGSVVATGLIPEGMSYSP TDDKDFADENKKIVEYSPEKAKEYWAKAKKELGITTLKMDIVADDVDSTKKLAEYIQGTL KDTLEGIDVTVSPVPFSVRIDRGSRGDFETILGGWAADYADPSSFLDLFVTGNNYNRGRF SSKAYDELIEASATRDASDPEKRWEDMVKAEKLLIGEETALAPLYQKATAHLRSKEVKGV VAHGAGAQYDYKWTYVTEE >gi|237663590|gb|GG668928.1| GENE 52 52274 - 56275 4682 1333 aa, chain - ## HITS:1 COG:SA0022 KEGG:ns NR:ns ## COG: SA0022 COG0737 # Protein_GI_number: 15925728 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Staphylococcus aureus N315 # 667 1333 113 772 772 430 41.0 1e-120 MKKLSFKKVKWGMHFLMAVALIAPSVTSTAYAVETTSQQSSEAVTSTTDSSRKQEPVITQ ETTDIKQEAPNQATSDSVKQSQETTAPTETTNLETSTAEKEETSTPQKITILGTSDVHGQ LWNWSYEDDKELPVGLSQVSTVVNQVRAQNPAGTVLIDNGDNIQGTILTDDLYNKAPLVN EKTHPMITAMNVMGYDAMVLGNHEFNFGLPLIKKIQQEATFPILSANTYNKEDGLRFVEG TTTKELDFNQDGQPDLKVGIIGLTIPHIPLWDGPRVTSLNFLPLKEEAEKAVTELKANDQ ADIIVASIHAGQQNSDPAASADQVIENVAGIDAYILGHDHLSFTKQGAAPNGKTVPVGGS KDTGTEVVKIDLSVAKNADKWEVQEGTATIVPTTNVPADEAVKAATKEYHEQTRAFIQEE IGTATADFLPKQEIKGIPEAQLQPTAMISLINNVQKEVTGAQLSAAALFKYDSKLPAGKI SYATIFDIYKYPNTLVSVPINGENLLKYLEKQGAYYNQTQPDDLTISFNPNIRVYNYDMI SGVDYKIDISKPVGERIVDAKIDGQPLDPAKEYTIAMNNYRYGGLASQGIQVGEPIKNSD PETLRGMIVDYIKKKGTLDPEQEIERNWSIIGTNFDEKWRAKAIELVNDGTLQIPTSPDG RTPNAAAITKQDVRNAGFDLDNAYTIMHTNDVHGRLEAGKGELGMARLKTFKDQENPTLM VDAGDVFQGLPISNFSKGADMAKAMNEVGYDAMAVGNHEFDFGLEIALGYKDQLNFPILS SNTYYRDGSGRVFDPYTIVEKAGKKFAIVGVTTPETATKTHPKNVEKVTFKDPIPEVEAV INEIKEKYADIQAFVVTGHLGVDETTPHIWRGDTLAETLSQTYPELDINVIDGHSHTAVE SGKRYGKVIYAQTGNYLNNVGIVTAPENEPTKKTAKLIPAEELLGLPENPAVKAIVDEAR TNFNAENEKVIVDYIPFTLDGQRENVRTRETNLGNLIGDAIMSYGQDAFSQPADFAVTNG GGIRADIKQGPIKVGDVIAVLPFGNSIAQIQVTGAQVKEMFEMSVRSIPQKDENGTILLD DAGQPKLGANGGFLHVSSSIRIHYDSTKPGTRLASDEGNETGQTIVGSRVLGIEIKNRQT QKFEPLDEKKQYRMATNDFLAAGGDGYDMLGGEREEGISLDAVLIEYLKSATSLRLYRAA TTIDLAQYKEPFPGERIVSISEEAYKELIGGGETPKPDPKPDPKPDPKPDPKPDPKPDPK SDPKPTPETPVATNKQNKAGARQSNPSVTEKKKYGGFLPKTGTETETLALYGLLFVGLSS SGWYIYKRCNKAS >gi|237663590|gb|GG668928.1| GENE 53 56716 - 58092 1739 458 aa, chain - ## HITS:1 COG:lin0237 KEGG:ns NR:ns ## COG: lin0237 COG1207 # Protein_GI_number: 16799314 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Listeria innocua # 1 457 1 457 457 542 59.0 1e-154 MENRYAIILAAGKGTRMKSKLYKVLHPVAGKPMVEHILDQVEQTEPTEIVTIVGHGAEMI KSHLGERSQYALQAEQLGTGHAVMQAQELLGGKQGTTLVITGDTPLLTAETLKNLFDYHQ GKNASATILTAHAEDPTGYGRIIRDHVGIVERIVEQKDASEEEARVQEINTGTFCFDNES LFEALAKTDTNNTQGEYYLTDIIEILKKEGKAVAAYQMADFDEAMGVNDRVALSTANKIM HRRLNEMHMRNGVTFIDPDTTYIDEGVVIGSDTVIEAGVTIKGKTVIGEDCLIGAHSEIV DSHIGNQVVVKQSVIEESVVREGADVGPYAHLRPKADVGANVHIGNFVEVKNATIDEGTK VGHLTYVGDATLGKDINVGCGVVFVNYDGKNKHQTVVGDHAFIGSATNIVAPVTIGDHAV TAAGSTITEDVPSEDLAIARARQVNKEGYAKKLPYMKD >gi|237663590|gb|GG668928.1| GENE 54 58303 - 59124 1011 273 aa, chain - ## HITS:1 COG:lin0231 KEGG:ns NR:ns ## COG: lin0231 COG0503 # Protein_GI_number: 16799308 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Listeria innocua # 1 270 1 270 272 354 65.0 8e-98 MKIRRSERLIDMTQYLLDHPHTLVSLTYFADRYQSAKSSISEDLAIVKKTFKERGTGILE TIPGAAGGVRFIPEIPYEEAEQLIMDLCDRLSEQDRLLPGGYVYLSDLLGEPNLLRQVGR IIASKYLGKQIDAVMTVATKGVPIAQAVSYYLNVPFVIVRRDSKITEGSTVSVNYVSGSS ERIEKMELSKRSLKRGSKVLVVDDFMKGGGTVNGMKSMIEEFEAELVGITVFAESKFNGR RAIDDYTSLLYVEDVDTQTKTISVVPGNYFTEK >gi|237663590|gb|GG668928.1| GENE 55 59268 - 60107 1067 279 aa, chain - ## HITS:1 COG:L165709 KEGG:ns NR:ns ## COG: L165709 COG1108 # Protein_GI_number: 15674095 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Lactococcus lactis # 1 267 1 267 269 242 59.0 5e-64 MAEMLSYAFMQKAFLAALFISVIAPMLGVFLVIRRQSLMADTLSHVSLAGVALGFFFNWN PNLMTLIVVIVAAIILEYLRMIYSTYSEISIAILMSGGLALALVLMNLTGGNSAASIQSY LFGSIVTITWDQVVMLAILFVVLVLLFMLFKRPMYVLTFDEDTAHVDGLPIHWMSMLFNV ITGVAIAVMIPIAGALLISAIMVLPAAIGMRIGKGFNTVIIISVFMGLIGMLTGLTSSYY LETPPSASITLIFIGLFLLVNIYRRVVVMVQRKQKMQRN >gi|237663590|gb|GG668928.1| GENE 56 60269 - 60961 231 230 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 12 229 14 232 311 93 32 5e-18 MHYIEVENLTFYYDDEPVLEDVSYYVDPGEFVILTGENGAAKSTLIKSTLGLLKPTSGKI TVAKKNSAGEKISIGYIPQQVASFNAGFPSTVIELVCSGRFPRNRWFKPLTKKDHLHVEK ALKSVDMWEMRHKRIGELSGGQKQRISLARVFATDPDLFILDEPTTGMDEQSRNEFYQLL QHSAHEHGKAILMITHDHEDIKTYVDRQIRLVRKEDSKWRCFHMSEESYT >gi|237663590|gb|GG668928.1| GENE 57 60987 - 61940 1067 317 aa, chain - ## HITS:1 COG:lin0191 KEGG:ns NR:ns ## COG: lin0191 COG0803 # Protein_GI_number: 16799268 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Listeria innocua # 12 316 9 311 312 303 56.0 4e-82 MTKIYRRLIIGVTLAISAFLLASCGQTTQSPKEKKELTVMTTFYPMYDFAKQVVGDEGEV ELLIPAGTEPHDYEPSAKDLAKITDADVFVYNSKELETWVPNVIENLDTKKVSIVEASQS IQLMQGTEEEESGEEGHEGHNHSHELDPHVWLDPVLAQKEVIAIRDALIKKYPEKKAVFE KNTAAYLEKLTALDKEYQAAFAGAKNRTFVTQHAAFGYLAKQYDLTQEPIAGISPDQEPS PSRLAELKKYIKTNNVSVIYFEASASTKVAKTLADETGVELAVLNPLESLTQKEQEAGEN YVSVMKENLAALQKSIH >gi|237663590|gb|GG668928.1| GENE 58 62108 - 62959 716 283 aa, chain - ## HITS:1 COG:lin0229 KEGG:ns NR:ns ## COG: lin0229 COG1947 # Protein_GI_number: 16799306 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Listeria innocua # 1 280 1 280 291 335 59.0 7e-92 MEIIERAPAKINLGLDVLHKRVDGYHEVESIFASVDLADHLTFENLEEDIIRIETDSSFL PVDRRNHVYQAVDLLKRTYNIHKGIKIYIEKRIPVAAGLAGGSSDCAAALRGLNKLWNLG LTMDELCEIGSQIGMDVPYCLRGGTAFANGRGEKIEALPTMPQCWIVLVKPRISVSTSTV FNDLAVDELHHPDIAGLRIAIENGDYTGMTQTVGNALESVTIARHPIVQQIKDRMLKYGA DAALMSGSGPTVFALCEKKTRAQRIYNGLKGFCEEVYLVRTLK >gi|237663590|gb|GG668928.1| GENE 59 63140 - 63385 333 81 aa, chain - ## HITS:1 COG:lin0228 KEGG:ns NR:ns ## COG: lin0228 COG4466 # Protein_GI_number: 16799305 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 76 1 76 85 93 60.0 1e-19 MPTTLSSIKKDLEGRIGSEIMLVAQTGRKRQTERKGILTETYPSVFVVDLDPDENSFERV SYSYSDVLTRTVEIEFIGQAV >gi|237663590|gb|GG668928.1| GENE 60 63500 - 64066 641 188 aa, chain - ## HITS:1 COG:lin0275 KEGG:ns NR:ns ## COG: lin0275 COG1595 # Protein_GI_number: 16799352 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Listeria innocua # 2 186 10 201 201 58 25.0 6e-09 MLEQIQQALAGDQEQFQALYGQYQPVIYKCMKKYYLKDYDTEDWLQEGRIVFFRTLERFD SEKQASLGKFFKRNFENHVHSLIRHQCAYKRRTDTLSISLEQRLESAGEELVDYLGTTAT DPLGQLMIQEKLAAFPTRLSSLEQQILNAYLKGYTLEEIAKVRGGTFSAVRSAYDRAKAK MKYTLENE >gi|237663590|gb|GG668928.1| GENE 61 64152 - 64682 530 176 aa, chain - ## HITS:1 COG:SPy1937 KEGG:ns NR:ns ## COG: SPy1937 COG3688 # Protein_GI_number: 15675740 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein containing a PIN domain # Organism: Streptococcus pyogenes M1 GAS # 1 173 1 172 172 149 47.0 2e-36 MKKQLLIVDGYNMIGAWPELVQLKKQERLEDARELLLSRLSNYAKYEGVEIIVVFDAQLV PGIQQTYKKYLLTVVFTKEDETADSYIERLAGEKNDRLTQVTVATSDLAEQWVVFSQGAL RTSANELYKAVQKTEKTIAIHATDIHFQQFRRNSPWNVEQLSKLSEKLEELSQKKD >gi|237663590|gb|GG668928.1| GENE 62 64697 - 65554 564 285 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 45 285 7 249 255 221 46 1e-56 MKNEKSRPFKKGKKRPERSDKRSKERNPRPATAGADGTSEELADNFVFGFHATVEALQQG RGNKLFLQEDARGEKIEQLKQAAKEQAVPVKWVPKAKLDTMSDHGVHQGMVLAITAYQYL TLEELLEQTKEKTATPFFLILDSLEDPHNFGSILRTADATGVDGIIIPKHRAVGITPTVT KASTGAVEHIPVARVTNLAQSIATLKENQFWIFGTDMSGTDYRRWNTQGAIALIIGNEGR GMSQGLHKEVDELLTIPMTGHVQSLNAGVAAGLLMYEVYRGRNPL >gi|237663590|gb|GG668928.1| GENE 63 65544 - 65942 345 132 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 [Bacillus selenitireducens MLS10] # 5 123 11 129 141 137 55 3e-31 MRDYKQLNGLALAYVGDAIYEIYIRDYLVSLGQTKPNVLHRMATHYVSAKAQASLMQAML AGEMLTEEEEVMYKRGRNAKSHTFAKNADVTTYRVATGFESLMGYLHLTQQKERLEELIN WCIKKVGETNEK >gi|237663590|gb|GG668928.1| GENE 64 65939 - 67351 1530 470 aa, chain - ## HITS:1 COG:BS_cysS KEGG:ns NR:ns ## COG: BS_cysS COG0215 # Protein_GI_number: 16077162 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Bacillus subtilis # 2 470 3 466 466 565 58.0 1e-161 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE VNYVSNFTDVDDKIIKAAKELKITAPEVAERFIKAFEEDTQALNVQPATLHPRVMDHMPD ILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVEQQLKEDP LDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLEFPHHENE IAQSEAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVDPQILRFFMSTT QYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDEHYLAQLNELEQRFIT EMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSGWLAIFGLFFKNEELV DAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDTPQGTRWRRSE >gi|237663590|gb|GG668928.1| GENE 65 67344 - 67883 589 179 aa, chain - ## HITS:1 COG:SPy1944 KEGG:ns NR:ns ## COG: SPy1944 COG1045 # Protein_GI_number: 15675746 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 173 1 173 193 234 65.0 7e-62 MSWLKRSVAAVKRNDPAARTTLEVLLTYPGLHALFWHRLSHFLYRHQLFLLAKIHAQFWR FITGVEIHPGATIGAGVFIDHGMGIVIGETAEIEEDVVLFHGVTLGGTGRDTGKRHPTVK KGAMISARAQILGPVVIGERSKIGAGAVVISDIPADATAVGVPAKVVRLNGRKVEKGHD >gi|237663590|gb|GG668928.1| GENE 66 68153 - 69610 1887 485 aa, chain - ## HITS:1 COG:lin0269 KEGG:ns NR:ns ## COG: lin0269 COG0008 # Protein_GI_number: 16799346 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Listeria innocua # 3 485 6 488 491 634 65.0 0 MTKVRVRYAPSPTGHLHIGNARTALFNYLFARHNDGEFIIRIEDTDQKRNIEDGEKSQLE NLAWLGMEWDESPAHPGEYGPYRQSERKEIYQPLIDQLLSSNRAYKCYCTPEELEAEREA QQARGEMPHYAGTCANLTPSEQAAKEAAGLEPVIRFRVPRNTEYKFDDIVKGEITFESDN IGGDFVIQKRDGMPTYNFAVAVDDHLMKISHVLRGDDHIANTPKQLMIYEAFEWTPPVFG HMTLIINSETGKKLSKRDETILQFIEQYRELGYLPEAMFNFIALLGWSPVGEEEIFSQED LIKLFDEQRLSKSPAAFDAKKLEWINNQYMKQMDLSELTDMCIPYLVADGRVEENPSPEK IEWLKQLVSLYQPQMSYAAEIVELSNLFFNEHPVLDDAAKEFLQGETVPTVLHAFKEQLE ALDVFDVPSIKAAIKAVQKETGVKGKNLFMPIRIAVSGQMHGPELGETIELLGKEKALDH LNKVL >gi|237663590|gb|GG668928.1| GENE 67 69663 - 70136 479 157 aa, chain - ## HITS:1 COG:BS_yacN KEGG:ns NR:ns ## COG: BS_yacN COG0245 # Protein_GI_number: 16077159 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Bacillus subtilis # 1 157 1 157 158 197 60.0 9e-51 MIRIGQGFDVHQLVPQRPLIIGGVTLPYEKGLLGHSDADVLTHAIIDAILGAAGLGDIGQ LFPETDPQFKNANSVNLLKKVNEKVGRSGFTIGNIDCTILAEEPKMSPYLAEMKKNLAAS CHLAVTQVNIKATTMETMGFVGKKEGIGAIAVALLEK >gi|237663590|gb|GG668928.1| GENE 68 70155 - 71300 1314 381 aa, chain - ## HITS:1 COG:lin0266 KEGG:ns NR:ns ## COG: lin0266 COG4956 # Protein_GI_number: 16799343 # Func_class: R General function prediction only # Function: Integral membrane protein (PIN domain superfamily) # Organism: Listeria innocua # 5 362 5 357 357 376 54.0 1e-104 MQKRIITLLMIIAGASLGISLFPMAWEMAKQGNNSWLNNNFTNGLIGAIIFFILSLGLAK YIVSAVKKIEAALNEMSLTYLLFGSIGAIIGLTIGVIISIPMYNLQIPVVNSLLPILVMI ILGYLGFRMGTTRIEEWKKVFTPRQKKANTEDAEGQMLERKVEDNFHKYKILDTSVIIDG RIYDIAKTGFLEGVLLIPNFVLYELQYIADSGDSLKRVRGRRGLDILNALQKEEGISVEM YDGDFEDISEVDSKLIKLAKLLDGVVVTNDYNLNKVSEFQNVPVLNINALANAVKPVVIP GETMNVMVVKAGTERQQGVAYLDDGTMVVVEDGQHYMNEQIEVVVTSALQTAAGRMIFAK PAHAGRGINDRKDNHPKNDKN >gi|237663590|gb|GG668928.1| GENE 69 71401 - 72771 1365 456 aa, chain - ## HITS:1 COG:SPy0236 KEGG:ns NR:ns ## COG: SPy0236 COG1066 # Protein_GI_number: 15674421 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Streptococcus pyogenes M1 GAS # 1 455 1 452 453 633 73.0 0 MAKKAKVQFECQSCGYVSPKYLGRCPNCGQWNSMVEEVIQDTSDRRARVSLTGKKTQPQR LSEVVPKKEPRVKTELVELNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSQQLAATGGT VLYVSGEESAEQIKLRAERLGTVNETFYLYAETDMHEISRAIEKLEPDYVIIDSIQTMTQ PDVTSVAGSVSQVRETTAELLKLAKTNGIAIFIVGHVTKEGSIAGPRMLEHMVDTVLYFE GDKHHTFRILRAVKNRFGSTNEIGIFEMQTHGLVEVMNPSQVFLEERLEGATGSSIVVAM EGSRPILVEIQALVTPTMFGNAKRTTTGLDFNRVSLIMAVLEKRAGLLLQNQDAYLKAAG GVKINEPAIDLALAISIASSYKEKGTSSSECFIGEIGLTGEIRRVNSIEQRVREAQKLGF TKVYVPKNNLGGWEAPEGIEIIGVSTIGETLRKVFK >gi|237663590|gb|GG668928.1| GENE 70 72850 - 73329 569 159 aa, chain - ## HITS:1 COG:L181168 KEGG:ns NR:ns ## COG: L181168 COG0756 # Protein_GI_number: 15672158 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Lactococcus lactis # 1 157 1 149 150 155 53.0 2e-38 MKQRGFEIISKYQEEGLSVPQRATKGAAGYDFQAAETVVVPSLWKLQQAGENPKPILVKT GIKAYMPDSEYLELVSRSSNPLKRFLLLANGVGVIDSDYYNNENNEGHIMFQFLNFGYED VVIEKGERIGQGIFKPFLLADDDQVEAERTGGFGSSGQK >gi|237663590|gb|GG668928.1| GENE 71 73655 - 74470 963 271 aa, chain + ## HITS:1 COG:lin1228 KEGG:ns NR:ns ## COG: lin1228 COG0263 # Protein_GI_number: 16800297 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Listeria innocua # 1 269 1 269 276 335 63.0 7e-92 MRNKLQQAKRIVIKVGTSSLIYPNGNINLKAIDQLAFTLSDLSNQGKEIILVSSGAIGVG LNKLNLSVRPTTIPEQQAVAAVGQAELMNIYNQRFSTYSQQMAQVLLTRDVIEYPESRNN VTNTFEQLLKMNIIPIVNENDTVAIEELDHLTKFGDNDQLSAIVCQIVQADLLVMLSDID GFFSDNPTVNKEATLFSEINEINKDLFQLAGGKGSRFGTGGMSSKLKAAERVLANQQAMI LANGKQPKIIFEILEGKDIGTLFIKGGHESD >gi|237663590|gb|GG668928.1| GENE 72 74463 - 75710 1286 415 aa, chain + ## HITS:1 COG:lin1227 KEGG:ns NR:ns ## COG: lin1227 COG0014 # Protein_GI_number: 16800296 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Listeria innocua # 1 415 1 415 415 528 65.0 1e-150 MTDLKQLGQQAKEASYTLGLMDTRQKNTLLNKMAAAIEANAPRILQANALDLEQAATHGI SETMQDRLRLTEERITAMAEGMRQVATLPDPIGEVDKMWRNEAGLLIGQQRVPLGVIGII YESRPNVTTDAASLCFKSGNAVILRGGKEAFHSNQILVTILQEALIQEAVSPHLIQFVDD TSRETAQQLMRLNDYLDVLIPRGGANLIKTVLTTATVPVIETGTGNCHIYVDKDAQLTMA TEIIVNAKCQRPSVCNAAETLLIHQEVAEAFLPTIEKALKEFHVELRADERALAIFEEAI PATEQDWETEFLDFILAVKVVDSLDEAIQHINRYNTKHSESIISDNYFATQQFLQQVDAA AVYANASTRFTDGFEFGFGAEIGISTQKLHARGPMGLAELTSTKYVIYGNGQARS >gi|237663590|gb|GG668928.1| GENE 73 75802 - 76758 760 318 aa, chain - ## HITS:1 COG:lin0383 KEGG:ns NR:ns ## COG: lin0383 COG2378 # Protein_GI_number: 16799460 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Listeria innocua # 8 316 1 310 315 145 27.0 1e-34 MTPMEGKMKKSERLNQELFFLRTHPQFNLNQLMKTFGISKSTALRDIEALENLGVPLYVE NGRYGGYRVLNKPLLPPIYFNENEVLAIFFSLQLLKLVAESPFGHSYQQIKQKLLHSLDE PTQFKISQMSKVVYYEGIEQVEAPGNLEQLFHCILAQQVIQFNYTRYEATTKKILPTRLT ILEGYWYCSGYDVTKKAWRTYRCDFMEAIQQLNQTLDFTNEELKESYRHQQTTARTIPFK AIITEKGKEFFYKHRFDNIQLEETPTECFLVGQIHPTETQFLANYFMGFGEEVTILEPVQ VKQAYVESIMRIQKKYQE >gi|237663590|gb|GG668928.1| GENE 74 76814 - 77281 541 155 aa, chain + ## HITS:1 COG:no KEGG:EF0035 NR:ns ## KEGG: EF0035 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 154 1 154 155 292 99.0 4e-78 MKNTQFALFMVLNGRATEALTFYQEAFAGDILFKITNQEFKERLNPSLTIPAGEEHWLSH SILQMDTFQLQLADNPLFAGMNTTPTEQLTLSLTVDSRHSAKTIFEKLTCHPESCIIQEP IENEFATFYAIVKDPFGLVTQITHEKQADPTKKGR >gi|237663590|gb|GG668928.1| GENE 75 77289 - 77798 611 169 aa, chain + ## HITS:1 COG:YDR540c KEGG:ns NR:ns ## COG: YDR540c COG4283 # Protein_GI_number: 6320749 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Saccharomyces cerevisiae # 1 166 1 166 179 175 57.0 3e-44 MRTYESKEALIEAIQIASQKYLAEFAEIPETLKDHRIETVAKTPSENLAYQLGWLNLLLS WEEQEQRGLTVQTPAEGYKWNQLGALYQSFYQTYGQMSLESQLIALQDILEKLLHWIASL SEDELFLPQQRAWATTKAQWPLWKWIHINSVAPFTSFRTQIRKWKKACL >gi|237663590|gb|GG668928.1| GENE 76 78358 - 80973 2276 871 aa, chain + ## HITS:1 COG:SP2231 KEGG:ns NR:ns ## COG: SP2231 COG4485 # Protein_GI_number: 15902035 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 6 844 2 829 850 526 39.0 1e-149 MKNKSRQFLKNNWPYMLASFFIPFLIMAIIYLSIGIYPGSSRSVLASDAFSQFSNFHASF NNVLHGKQSLFYTWNASLGLNYLSLISYYLGGLFTPLVFFFNNQNMPDALYFLTLLKIGS AGLSFWFLAKQTFKIPKWSHVTLSVSYALMSFIVAHSELIMWLDAFIYLPLVILGIHRLM DQRKPTLLFVSYFLLFITNYYFGFMIGLFSFLYYFARTFTDWQRYKSRIVAYFTTSLLAG GASMIMVLPAVLDLRTNGETLSEITTFKTEATAFLDIIMKNMIGVYDTTKYGSIPFIYIG LLPLIFCLFYFVTKEVPLKNKLLFGSLFVLLIASFYITPLNLFWHGMHAPNMFLFRYSFL FSFLVILLAGYGWEKFEKDDLGVLSGLILILLAIFALAMGTKGATSYTYVTLTSFVLTAT FLLLYFFGIAFYQLKKAPMQYLVILLLLLVSGEAIINTRAMVTGILDDWNYASRSLYSEP YPDLKNLVDQTKKENDTFYRLENLNGVSANDGINYGYSGISMFSSVRNRHSSTYLNALGF RSRGTNLNIRYQNNTLLMDALMGIKYNIAENNPMKFGFERQAAAGKYQLYRNENALPLGF LANKEIYNVRQPLNDNLGSQTNLLNALANTNERYFTFYQPTMTLQNNVTITQNTAGVTFT EKQHNVAKEISYTVNVPANTQAYLSLFPTDFAQLESSTATVTVNGSSQQSQIGITGQYYN LGYYPKDTTVNFKVSFYGTKAVSFVQPQVVGLNTNAFEKAISAVQEKGVDLTTGKRSASG TFTADNDQVLVTTIPYDKGWRVKIDGKKVTPKAFKDAFLSVPVSAGTHTIQFSYLPEGLI PGIVLFVLCTGGFVAYVTLIPARRNRKKEDK >gi|237663590|gb|GG668928.1| GENE 77 81010 - 83601 2119 863 aa, chain - ## HITS:1 COG:lin1803_2 KEGG:ns NR:ns ## COG: lin1803_2 COG2898 # Protein_GI_number: 16800871 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 257 849 1 590 613 413 38.0 1e-115 MKKNISQLTQWLKEHSLLLKLIFLGSVLVFVANQVTHIAQGMTWADIFSTMEQQSTGRLI GMVLAGLLGVIPMLLYDYVVVKLLEKEGKPPMKRMDWLTSAWVTNTINNLAGFGGVVGAT LRINFYGKDVPRGKVVATVSKVALFLISGLSILSFVAFVDLFFIRTQNVFREYWVWLLLG SLIAPALWFFTYLKRRTLFKTFFPKAVLLLFGASLGQWLGGMFAFLMIGRLMQVPVSMVS VYPMFVIATLIGMLTMVPGGMGTFDVLMILGLSQLGIDRSQAVVWLLYYRLFYYVTPFMT GVILFLQQAGMKVNQFFDNLPRLFSQKVAHFILVAALYFAGIMMVLLSTVTNLSNVSRLF QVLLPFSFNFLDQTLNLFVGFLLLGLARGISMKVKKAYWPTIILLGFCIVNTVARTTSWQ LIAVYAVILLAVILARKEFYREKFVYSWGALTVDSILFGCLFIGYAVAGYYAARPAGGNQ VINHFLLFPSDDVWFNGLIGLSISLIGLFFLYQYLAETTVTLGEGFEEARLTRFLEKFGG NEGSQFLYLKDYGHFYYQEEGEDQVLFGFQMKFNKCFVLADPIGHREKWTAATLAFMDQA DLLGYQLVFYRISEEYVMNLHDCGFEFMKVGEEGLIQFDEPSTVNQTAWTETVTEKIAAE AADFQFEFYPETISDALYQELERVSADWSRNQKERYFIGGRLDPEYLKCSSVGLVRQKQT VIGFITGKEMEKGKSISYDLLRIRSEAPAFTREYLFTHFIETYQQQGYQLIDIGMAPLAN VGESKYSFLKERFVNIFYKYSYQIYAFQDTRKRKEQYVTSWQPRYFAYPKRTSVLFAFVQ LSLLITKGRHQSVSLVEEAMTEI >gi|237663590|gb|GG668928.1| GENE 78 83790 - 84170 407 126 aa, chain - ## HITS:1 COG:SP1567 KEGG:ns NR:ns ## COG: SP1567 COG0251 # Protein_GI_number: 15901410 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Streptococcus pneumoniae TIGR4 # 2 124 3 125 126 155 62.0 1e-38 MKTIKTKQAPQAIGPYSQAKIVNGLLITSGQIPLDPETGKVVGTTIKEQTNQVLKNIQGL LTEAGSDFAHVVKTTCYLQNMADFTAFNEVYAEYFSAEYPARTTIEISKLPMDVLVEIEI IAEVVA >gi|237663590|gb|GG668928.1| GENE 79 84270 - 85475 891 401 aa, chain - ## HITS:1 COG:ECs2330 KEGG:ns NR:ns ## COG: ECs2330 COG1168 # Protein_GI_number: 15831584 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Escherichia coli O157:H7 # 3 388 4 389 390 355 45.0 1e-97 MSFDKAIDRRGTYCTQWDFVEDRFGEADLLPFTISDTDFAVPEAVLATLQERLKHSVFGY TRWNHPQLKEAIQTWYQTRFQTKIEEHWIMYTPTVIYGISALIQLLTNEGEGIILQTPAY DAFFKVIQENKRQVVANELLYQEKRYSIDFIDLEKKLAQPENRCLLLCSPHNPTGRVWEQ WELERMVSLCQQYDVFLLSDEIHMDIVNKGQVHRPITQFGYKKSAIITSGTKTFNFPGLI FAYALIPDNELRDAFQLKLKNADGLSSTSILGMLATMTAYQKCGTWVDELNDYLAENQRY VKDFLQTYLPKIKVTELEATYLMWLDVSAAVPDVARLQEALVSVGKVAIMDGSIYGGNGQ RFLRLNIGCSQAKLHEGLERMRQGFEAVLQKDGTTSALGNN >gi|237663590|gb|GG668928.1| GENE 80 85499 - 87067 1625 522 aa, chain - ## HITS:1 COG:malX_1 KEGG:ns NR:ns ## COG: malX_1 COG1263 # Protein_GI_number: 16129579 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 7 425 8 430 450 498 61.0 1e-141 MAVKKKKATFWEFFQGLGKTFMLPVALLAFMGILLGLGSSFSSESMIETIPFLGKPAVKI IFQFMSTIGGFAFAYLPVMFAMAIPLGLVRKEKGIAAFSGFVGYTVMNLAINFYLVQTNR LVDPEQLREAGQGMVFGIQTIEMGVLGGIIAGLIVYKLHNRFYTVQLPDSFAFFSGARFV PIITSLVMAFVGLVIPLVWPLFALMIMAIGQLIQRSGIFGPFLFGSGERLLLPFGLHHIL VSMIRFTEAGGSAVVAGKEVFGALNIFYAELQNNLPISPSATAFLSQGKMPTFIFGLPAA ALAMYHTAAPANRHKIKGLLLSGVIATAITGITEPIEFLFLFISPLLWLFHVIMTGLGFM VMALLGVVIGNTDGGLLDFVIFGLLQGTYTKWWWVLIVGAIWFVVYYFVFKTVIVTFDLK TPGRDKVLDETEYTDQEVQYKKTGGYDAPGILAALGGQENIQAIDNCITRLRLVLADANK VDDDKLKQLGALGVVHLDAQNVQVIIGTKVTTVRNQLEMILG >gi|237663590|gb|GG668928.1| GENE 81 87216 - 87986 655 256 aa, chain - ## HITS:1 COG:BH2675 KEGG:ns NR:ns ## COG: BH2675 COG1737 # Protein_GI_number: 15615238 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 15 245 20 259 287 89 27.0 5e-18 MTTEGLIALLEKKRNDLSKIENQVLDYILTHMTEISSQTIYEVAQALFVSTATISRTAKH LGYRGFQELKYAIVQSVQSESTESDSRSFQAITQQLIANVQDSFQQMDEAKVAEMLKMIE CANTIEVFGVGGSFPICTDFARKLTFLGKKAYARSDWDEQAAAVKNLDGQDLAIFVSYTG ETKGILAYARVAQEQQVPMISLISTKGSTLEKLSTTTLFAKGTTRYHQRVDLSSRIAVIC LFDTVLLMYAEAKQPR >gi|237663590|gb|GG668928.1| GENE 82 88184 - 88387 243 67 aa, chain + ## HITS:1 COG:no KEGG:EF0026 NR:ns ## KEGG: EF0026 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 67 1 67 67 92 100.0 7e-18 MNNQRPMFINILLVVLLFLVVGSLFSAVVGIVGSLLWLAVKILVPVAIIVWLVRTISGNN GNCHRRY >gi|237663590|gb|GG668928.1| GENE 83 88434 - 88961 684 175 aa, chain - ## HITS:1 COG:SA2491 KEGG:ns NR:ns ## COG: SA2491 COG3247 # Protein_GI_number: 15928285 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 3 174 2 169 170 78 33.0 6e-15 MEQRQHHGIDWGSLVLGILFVLTALISFQNPAGNLIAIVMVFAIFAIIKGIFEIFVRNRM KELLGYKAYAPIILGIIDILIGVYLLFNLNIGVAVLPFVFAIWFLFDSIFGLFTLDFAKR VSTGYFWFTLIVDVLGIILGVMLLFNPLSSALTLSFLVGFYFMMFGISNIVYAFR >gi|237663590|gb|GG668928.1| GENE 84 89092 - 89178 56 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWDKLTESNGDVTFIYTKMSEFYTKKDN >gi|237663590|gb|GG668928.1| GENE 85 89228 - 89605 386 125 aa, chain - ## HITS:1 COG:CAP0069 KEGG:ns NR:ns ## COG: CAP0069 COG4687 # Protein_GI_number: 15004773 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 123 12 134 135 194 78.0 5e-50 MVQSLNTKVDLVIDATAFTGLTDYGQIMIGDRGFEFYHAKDPRKFIQIPWEEVDYVLASV MFKGKWIPRYAIQTKKNGTYTFASKEPKRVLRAIREYVDPDHMVQSLSFFDVIKRGILSI GKKKK >gi|237663590|gb|GG668928.1| GENE 86 90042 - 90953 1283 303 aa, chain - ## HITS:1 COG:lin0145 KEGG:ns NR:ns ## COG: lin0145 COG3716 # Protein_GI_number: 16799222 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Listeria innocua # 1 303 1 303 303 502 86.0 1e-142 MAEKIQLTKKDRLAVAWRSTFIQGSWNYERMQNGGWAFSMIPAIKKLYKTKEERSAALKR HLEFFNTHPYIASPILGVTLALEEERANGAPVDDVAIQGVKVGMMGPLAGVGDPVFWFTV RPMLGALGASLAMGGNILGPILFFVAWNLIRWSFMWYTQEFGYKAGSKITDDLSGGLLQD ITKGASILGMFVLAALVQRWVSIKFLPIVSQVKLDKGAYIEWDKLPAGGEGMHKAFEQVN QGLALSPTKVTTLQDNLDQLIPGLAPLLLTFLCMWLLKKKVSPIVIILGLFVVGVVGHLI GLL >gi|237663590|gb|GG668928.1| GENE 87 90976 - 91779 1086 267 aa, chain - ## HITS:1 COG:lin0144 KEGG:ns NR:ns ## COG: lin0144 COG3715 # Protein_GI_number: 16799221 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Listeria innocua # 1 267 1 268 268 332 86.0 4e-91 MSVISIILVLLVAFLAGMEGILDEFQFHQPLVACTLIGLVTGNLEAGIVLGGTLQMIALG WANIGAAVAPDAALASVASAIILVLGGQGVKGVPSAIAIAVPLAVAGLFLTMIVRTVAVP IVHMMDAAAEKGNIKQVEMLHIFAVCLQGIRIAIPAGALLFIPADTVRNFLESMPAWLTD GMAIGGGMVVAVGYALVINMMATKEVWPFFIIGFVVAAISQLTLIALGALGVALALIYLN LSKMGGSSNSNGGGNSGDPLGDILNDY >gi|237663590|gb|GG668928.1| GENE 88 91814 - 92806 1313 330 aa, chain - ## HITS:1 COG:lin0143_2 KEGG:ns NR:ns ## COG: lin0143_2 COG3444 # Protein_GI_number: 16799220 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Listeria innocua # 166 327 1 162 165 243 84.0 3e-64 MVGIILASHGEFAEGILQSGAMIFGEQENVKAVTLMPSEGPDDVKAKMQEAIASFDNQDE VLFLVDLWGGTPFNQANSLLEDHKDKWAIVAGMNLPMVIEAYASRFSMESAQEIATHILE TAKDGVKVKPEELQPAEAPKAAATEDAQPKGSLPPGTVVGDGKIKFVLARIDSRLLHGQV ATAWTKATQPNRIIVVSDAVAKDDLRKKLIEQAAPPGVKANVIPISKMIEVAKDPRFGNT KALLLFENPEDVLKVVEGGVEIPEVNVGSMAHSVGKVVVSKVLSMGQEDVDTFDELKAKG IKFDVRKVPNDSKANMDEILKKAKNELANA >gi|237663590|gb|GG668928.1| GENE 89 93041 - 93553 529 170 aa, chain - ## HITS:1 COG:lin0776 KEGG:ns NR:ns ## COG: lin0776 COG3444 # Protein_GI_number: 16799850 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Listeria innocua # 3 163 1 161 161 190 63.0 1e-48 MVMDIRLARIDDRLIHGQVATVWAKLTNINRILVVSDSVAYDNLRKALLVQAAPPGVKVN VITVQKMIDVYPDPRFDSFRAMLLFTNPLDVKRVVEGGVQLTSVNIGGMSFSTGKRMITN AVAVDANDLKAFLFLNEQGIELEIRKVAADSQVNLMDLLKKERSKENNAS >gi|237663590|gb|GG668928.1| GENE 90 93756 - 96641 2634 961 aa, chain - ## HITS:1 COG:lin0778_1 KEGG:ns NR:ns ## COG: lin0778_1 COG1221 # Protein_GI_number: 16799852 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Listeria innocua # 1 469 1 461 464 407 45.0 1e-113 MKRIEKIYQYVKEQTKNLTPMTLTSDAGVTTQEISERLNIQRTNASKDLNQLVREGRLKK LSGRPVKYVAQVAFQHRPLTKPVKSYREKSMDHSTKTFIEPLVEPVVTTSKTPEVEDIFK KIIGSAGSMKTPVEQAKAAILYPPKGLNCLITGPTGSGKTYFAHAMFQFAKLNQIVAKEK EFVVFNCADYAHNPELLMSHLFGYVEGAFTGATKAKEGIIDEADGSILFLDEVHRLPPEG QEMIFYFMDHGVYARLGETVKSHHADVRIICATTENPTSSLLNTFVRRIPIIIQLPNFSD RPAKEKIDLLKVMVSIEAARIQRRISLSEDVVKALIGSVSYGNVGQLKSNVQLVTARGFL NQMEQEELMITMDELTDNIKEGIMQLASNREVLSELSKYLEPQLVVSPNESLVAIQSDAY ELPYNLYEIIGDKAALLKADGLDQELINNFITTDINVHLKSFYKDYGFTFDTENKLAEIV DQRIIDVTKKIYNFAAKRLSYSFQPNFIYAMSLHISSFLKRIQLGKDPKHPLNESIRNMV LDYPTEFEIAKEIKNIIESSYQMEIPESESYYLAVLLISLRENPEAGRIGIVVAAHGNST ASSMVQVVSQLLNVDNLKAVDMPLDMPPKEALRKIVEAVGEVNEENGVLLLVDMGSLSTF SEEIVRQTGIDVRTVDMVTTPIVLEAARKTALIDTQLETLHESLKNFHGYADIRQSETKQ IIENWKTRAIIAICASGEGTARRMKELIEEAVLPQIDWHLEVIPLSIVNMKEVLPKIQED YEIIATTGITNPKIGVPYISMENFFSGEAEKIIQQLLAERKEEVMNKPLDEAAAKEICLK YMEQSFTFINGKKIIDLLWSFAKNIQTQLAMPEEYTFYINLIMHTSGMLERILRNDTLTV SEKELGQLVQEPIYPVIVASIETMEEALNMDVPAEEIYFIAQLVKNAQCIEDKITEIDTL D >gi|237663590|gb|GG668928.1| GENE 91 96895 - 98526 1895 543 aa, chain + ## HITS:1 COG:BS_ykpA KEGG:ns NR:ns ## COG: BS_ykpA COG0488 # Protein_GI_number: 16078507 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus subtilis # 1 540 1 539 540 798 72.0 0 MITVNDVSLQFPDRKLFEEVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIQPTTGVVSM GPNERLATLKQNHFDYEDYTVLETVIMGHKRLYEVMKEKDAIYMKEDFSDEDGIRAAELE GEFAELDGWEAEPEAAVLLQGLNIPEELHDQKMSELTAGQKVKVLLAQSLFGKPDVLLLD EPTNGLDTRSINWLEEFLINFENTVIVVSHDRHFLNKVCTHMADLDFSKIKLYVGNYDFW LESSQLATKLQAQSNAKKEEQIKELQDFIARFSANASKSKQATSRKKMLDKITLDDIQPS SRRYPFVGFTPEREIGNDLLQVENVSVTIDGKKILDNISFNLTKDDKVAFIADSDITTTT LFKVIMGEITPDTGSVRWGVTTSQAYLPKDNSKDFEEPLTILDWLRQFAGKEEDDNTFLR SFLGRMLFSGEEVLKPVNVLSGGEKVRVMLSKLMLSKANVLVLDDPTNHLDLESITALND GLMAFTGSILFASHDHQFIQTLANRIIAVSDKGVIDRAETTYDEFLENPEIQKQMDVLFS SDY >gi|237663590|gb|GG668928.1| GENE 92 98722 - 99600 926 292 aa, chain - ## HITS:1 COG:L123851 KEGG:ns NR:ns ## COG: L123851 COG1307 # Protein_GI_number: 15673853 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 1 289 1 288 289 209 38.0 7e-54 MNYQLVTDSCCDLPYTYLKENQVPFISMNIQIDGKEYRDDLGETFDYQNFLTAIKNGSMP TTSQVNVGRYNEFFRPFVEQGLPVIYLAFSSGLSGSYQSALQSVEMLKEEYDNVEIHIID TKAASLGQGMLVREAIRLQTDGHSLGEVVAYLEEQKMKLHSWVTVDDLKHLERGGRISKT AAALGGLMNIKPIIRVDAAGKLASVGKTRGRNKSLQKIAQETIQGIVEPMKQTLLIAYAG TKDDAEKVKELIEKEIEVNEILIYPLGPTITSHTGIGCIAVFSFGEKRKLAS >gi|237663590|gb|GG668928.1| GENE 93 99725 - 101128 1586 467 aa, chain - ## HITS:1 COG:SPy0160 KEGG:ns NR:ns ## COG: SPy0160 COG0104 # Protein_GI_number: 15674367 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Streptococcus pyogenes M1 GAS # 38 467 1 430 430 753 85.0 0 MTETLLIVKEYSIFTLERDWFYWYNDSGQKNYERGVRMSSVVVVGTQWGDEGKGKITDFL SENAEVIARYQGGDNAGHTIKFDGVTYKLHLIPSGIFYKEKISVIGNGVVVNPKSLVKEL AYLKENNVATDNLRISDRAHVILPYHIKLDQLQEDAKGENKIGTTIKGIGPAYMDKAARV GIRIADLLDKEIFAERLKINLEEKNRQFVKMFDSEAIEFDDIFEEYYEYGQQIKQYVTDT SVILNDALDAGKRVLFEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKINKVVG VCKAYTSRVGDGPFPTELFDETGETIRRVGKEYGTTTGRPRRVGWFDSVVMRHSKRVSGI TNLSLNSIDVLSGLETVKICTAYELDGELIYHYPASLKELSRCKPVYEELPGWSEDITGC KTLADLPANARNYVHRISELVGVRISTFSVGPDRNQTNVLESVWAQI >gi|237663590|gb|GG668928.1| GENE 94 101254 - 102621 1553 455 aa, chain - ## HITS:1 COG:L0286 KEGG:ns NR:ns ## COG: L0286 COG0305 # Protein_GI_number: 15672728 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Lactococcus lactis # 1 452 1 452 455 535 67.0 1e-152 MNELLQDRVPPQNIEAEQAVLGSIFLDADVLIEAMEYVEPKDFYRRSHQLIFQTMMTLSD RNEAIDVVTIKDRLEQENLLEDVGGLSYLSDLALAVPTAANVIYYAKIVEQKSLLRNLIQ TATEIVTKGFEQGEDVESILDDAERSILEVSEKRNRSGFLSISDVLNTTIANIDQLYQND EEITGLPTGYQALDKMTAGLQAEELIILAARPAVGKTAFALNIAQNVGTKTDKAVAIFSL EMGAESLVNRMLCAEGSIEASHLRTGQLSEEEWQNLIIAMGSLSRANIYIDDTPGIKITE IRAKCRKLAQEKGNLGLILIDYLQLIEGTGKENRQQEVSDISRQLKKLAKELKVPVIALS QLSRGVEQRQDKRPVLSDIRESGSIEQDADIVAFLYRDDYYDRGEGEDGDHEPPEVDNVV EVIIEKNRSGARGTVELLFIKEYNKFSSLSPRTEF >gi|237663590|gb|GG668928.1| GENE 95 102894 - 103355 759 153 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227518097|ref|ZP_03948146.1| 50S ribosomal protein L9 [Enterococcus faecalis TX0104] # 1 153 1 153 153 296 99 3e-79 MKEMKVIFLQDVKGKGKKGDVKEVPTGYAQNFLIKNGYAKEANKGSMSALAGQKKAQEKH EAEVLAQAKEMQAFLEDEKTVVEIKAKAGEDSRLFGSIPSKQIAEALNKQYNVKLDKRKI ELANPIRSLGYTNVPVKLHHEVTAKIKVHVVAE >gi|237663590|gb|GG668928.1| GENE 96 103352 - 105328 785 658 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|162447066|ref|YP_001620198.1| bipartite protein: signaling protein and ribosomal protein L9 [Acholeplasma laidlawii PG-8A] # 9 647 6 659 818 306 30 1e-106 MQKKRIQKNGFLIVVGLLLVEFLLYFLLTNKWLLLAVIIALDIFLLVVIRLLIRDVEITN VEKIQEASSIAEQSLDYVVNEVPVGIITYNGETRAVEWLNPYAASIFNKDNQLTLTASQV TSYLELAERNQDIFTIDENTYRFSVNKEQHTITFEDITKESNLYQEKVEMQTAIGIVSVD NYDDVTDTMDEKEISYLNSFITTMVSDWMDQYKVFYKRINAERYFFIAQWEDIQKMMDEK FSILDTIRKESANHEVAITLSMGIAYGGPTLDQTGTTAQTNLDTALVRGGDQVVVKEAKD EAKPLFFGGKTAVTTKRSQVRSRAMSMAIKGIIAESADIYIMGHRYPDMDALGSAFGVAR LASFNNRKAWIVLDENEIIPDVKRVLEAIKEYPELEERIISPKEAMKRKKESSLLVMVDY HKPSLSISQELYERFDKVVIIDHHRRGDEFPAKPLLSYIESSASSASELVTELIEYQSNS ANKLQAFEATMMLAGIVVDTKSFNTRTTARTFDVASYLRTCGADSSLVQYLLSSDLTSYL EMNNLISKSEYVTKDTVVVAGSEDKEYDSVTAAKTADTLLSMAGINAAFVITKRTDQQIG ISARSNGSINVQIIMENLGGGGHFTNAAVQLSNVTVAEVKEQLLDVIRQNINEMYEQE >gi|237663590|gb|GG668928.1| GENE 97 106210 - 106449 397 79 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|29374670|ref|NP_813822.1| 30S ribosomal protein S18 [Enterococcus faecalis V583] # 1 79 1 79 79 157 100 3e-37 MAQQRRGGRKRRKVDYIAANHIEYIDYKDTELLKRFISERGKILPRRVTGTGAKNQRKLT IAIKRARIMGLLPFVSDEQ >gi|237663590|gb|GG668928.1| GENE 98 106475 - 107041 644 188 aa, chain - ## HITS:1 COG:L0302 KEGG:ns NR:ns ## COG: L0302 COG0629 # Protein_GI_number: 15674172 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Lactococcus lactis # 1 188 1 166 166 182 59.0 3e-46 MINNVVLVGRLTKDPDLRYTASGSAVATFTLAVNRNFTNQNGDREADFINCVIWRKPAET MANYARKGTLLGVVGRIQTRNYENQQGQRVYVTEVVCENFQLLESRSASEQRGTGGGSFN NNENGYQSQNRSFGNNNAGSGFNNNNNSFNPSSSQSQNNNGMPDFDKDSDPFGGSGSSID ISDDDLPF >gi|237663590|gb|GG668928.1| GENE 99 107086 - 107388 510 100 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|29374668|ref|NP_813820.1| 30S ribosomal protein S6 [Enterococcus faecalis V583] # 1 100 1 100 100 201 100 2e-50 MSQDTKYEIMYIIRPNIDEEAKTALVERFDTILKDNGAEVIESKDWEKRRLAYEMNGFRE GIYHIVNVTSPSTAGAINEFDRLAKINDDIIRHMIVKVEA >gi|237663590|gb|GG668928.1| GENE 100 107841 - 110342 3075 833 aa, chain - ## HITS:1 COG:SPy1152 KEGG:ns NR:ns ## COG: SPy1152 COG0188 # Protein_GI_number: 15675129 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Streptococcus pyogenes M1 GAS # 8 832 5 827 828 1117 70.0 0 MSEEIKENIQDVNLTSEMKESFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTP DKPHKKSARIVGDVMGKYHPHGDIAIYESMVRMAQPFSYRAMLVDGHGNFGSVDGDGAAA MRYTEARMSKIALEMLRDINKNTVDFQGNYDDSEQEPVVLPARFPNLLVNGTTGIAVGMA TNIPPHNLSEVIDATSLLMDNPDVTTNELMEVLPGPDFPTGGLVMGKSGIRRAYETGKGS ITVRAKVELTEMPNGKERILVTELPYMVNKAKLIERISELHRDKRIEGITDLRDESSREG MRIVIDVRRDVSASVVLNNLYKMTALQTSFGFNMLAIEKGVPKILSLKRILENYVEHQKE VITRRTIFDKNKAEARAHILEGLRIALDHIDEIIAIIRGSQSDDEAKATLIERFEFSDRQ AQAILDMRLRRLTGLERDKIENEYQELLKFIADLEDILARPERVIEIIKTELNDVRTKFG DARRTELLVGEVLSLEDEDLIEEEEVVITLTNNGYIKRMANSEFRAQRRGGRGVQGMGVH DDDFVKNLVSCSTHDTLLFFTNTGKVYRAKGYEIPEYGRTAKGIPVINLLGIDSAEKIQA IISVEGKAEAGKYLFFTTLKGTVKRTAVTAFSNIRSNGLIAISLKEDDELVNVVTTNGNQ KMIIGTHAGYSVTFDENTVRDMGRTASGVRGIRLRENDYVVGAAILDENKEVLVITENGY GKRTKASEYPVKGRGGKGIKTANITEKNGPLAGLTTVNGDEDILLITNKGVIIRFNVDSV SQTGRATLGVRLMRMEDGAKVVTMAVVEPEEVEEEIVEVVETTENETTSETEE >gi|237663590|gb|GG668928.1| GENE 101 110398 - 112347 2234 649 aa, chain - ## HITS:1 COG:L0283 KEGG:ns NR:ns ## COG: L0283 COG0187 # Protein_GI_number: 15672887 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Lactococcus lactis # 1 643 1 646 651 961 77.0 0 MTEEEKNMRERAQEYDASQIQVLEGLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSIDEA LAGFAKSIQVIIEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVLHAGGKFGGGGYKV SGGLHGVGSSVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKVIEETDRHGTTVHFIP DPEIFTETTVYDFDKLATRVRELAFLNRGLHISIEDRREGQEDKKEYHYEGGIKSYVEHL NANKDVIFPEPIFIEGEQQDITVEVSMQYTDGYHSNILSFANNIHTYEGGTHESGFKTSL TRVINDYARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEVRTVT DRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKGALEISNLPGKLAD CSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAILPIRGKILNVEKASMDKILANEEIRS LFTAMGTGFGEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRFMRPIVEAGYVYIA QPPLYGVKQGKNITYVQPGKHAEEELAKVLEELPASPKPSVQRYKGLGEMDDHQLWETTM DPEKRLMARVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLDI >gi|237663590|gb|GG668928.1| GENE 102 112344 - 113471 1110 375 aa, chain - ## HITS:1 COG:lin0005 KEGG:ns NR:ns ## COG: lin0005 COG1195 # Protein_GI_number: 16799084 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Listeria innocua # 1 372 1 370 370 399 55.0 1e-111 MRLNELTLQHYRNYETVSLDFPKTLNLFLGENAQGKTNLLESIYVLAMTRSHRTSNEKEL IGWEQAAAKISGVVEKKTGTVPLEILISNKGRKTKVNHIEQKRLSAYIGQLNVILFAPED LSLVKGSPQVRRKFIDMELGQVSPIYLYDLVQYQSVLKQRNQYLKQLAEKKQTDTVYLDI LTEQLAEFGGKVLYARLGFLKKLEHWANLLHQKISHGRETLTIDYASSIPIDNTDLSLEA LQNQLLQQLMNNRKRELFKANTFLGPHRDDLLFIVNGQNVQTYGSQGQQRTTALSIKLAE IDLMHSETGEYPVLLLDDVMSELDNERQIHLLETIEGKVQTFLTTTSLDHIKDKLTVEPD IFYVQQGKIERNSAT >gi|237663590|gb|GG668928.1| GENE 103 113458 - 113703 319 81 aa, chain - ## HITS:1 COG:BS_yaaA KEGG:ns NR:ns ## COG: BS_yaaA COG2501 # Protein_GI_number: 16077071 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 70 1 70 71 70 52.0 5e-13 MKKTFVLATEYITLGQFLKEINVIGSGGQAKWYLADNSVFVDGELENRRGRKLYAGMMIE IPEEGTFFMVKNGNESDDAAE >gi|237663590|gb|GG668928.1| GENE 104 114283 - 115413 1454 376 aa, chain - ## HITS:1 COG:BS_dnaN KEGG:ns NR:ns ## COG: BS_dnaN COG0592 # Protein_GI_number: 16077070 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Bacillus subtilis # 1 375 1 377 378 343 51.0 3e-94 MKLTVKRSVFLQELQTVQRAISSKTTIPILTGVKIVLSEDGLSLTGSNADISIESFLSKD DEKAQMTIERTGSIVLQSRFFGEIIRKLPEDMFTMEVLDNNQVAITSGKADFTVNGLDAD NYPHLPVIDTQNQMKLPVHLLTKIISETGFAVSMHESRPILTGVHFILENQKLLAVATDS HRLSQRVIPTEQAVEDFNIVIPGKSLTELSRSLTNEEEMVEISIMENQVLFKTETMYFYS RLLEGNYPDTNRLIPTSHNTQIEFYVPELLSAIERASLLSHEGRNNIVRLSISPDSVVLY GNSPEIGKVEEALNYENVSGEALDISFNPDYMKDALRAFGDMNITVKFLSPIRPFTLEPT ETELDFIQLITPVRTN >gi|237663590|gb|GG668928.1| GENE 105 115615 - 116958 1243 447 aa, chain - ## HITS:1 COG:BH0001 KEGG:ns NR:ns ## COG: BH0001 COG0593 # Protein_GI_number: 15612564 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Bacillus halodurans # 1 447 1 449 449 474 53.0 1e-133 MPDVESFWHSLEEAYQAILSAPSFDAWIKTTRPLKLDNNQLWLEVPSAVHRDYWEKNLSA KIVETGFKLTGAEVMPHFVVADEKDAALAQELEEPAEEEVVFSEQSKKAMLNPKYTFDTF VIGKGNQMAHAAALVVAEDPGSIYNPLFFYGGVGLGKTHLMHAIGHQMLVNQPDAKVKYV SSETFTNEFINSIQTKTSEQFRKEYRNVDLLLVDDIQFLAEKEATLEEFFHTFNDLYNEN KQIVLTSDRPPNDIPKLPERLVSRFAWGLSVDITPPDLETRIAILRKKADAERLEIPDDT LSYIAGQIDSNIRELEGALVRVQAFATINGEDITTSLAADALKSLKSVGSKNQLSILQIQ EEVSKYYHVPLKDLKGKKRVKTIVVPRQISMYLAREMTDNSLPKIGAEFGGKDHTTVIHA HEKIQQLLEKDPAIQKEVSEIKNLLNS >gi|237663590|gb|GG668928.1| GENE 106 117481 - 117615 223 44 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29377774|ref|NP_816928.1| 50S ribosomal protein L34 [Enterococcus faecalis V583] # 1 44 1 44 44 90 100 4e-17 MKRTYQPNKRKRQKVHGFRKRMSTKNGRRVLASRRRKGRKVISA >gi|237663590|gb|GG668928.1| GENE 107 117813 - 118175 303 120 aa, chain + ## HITS:1 COG:SPy0246 KEGG:ns NR:ns ## COG: SPy0246 COG0594 # Protein_GI_number: 15674428 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Streptococcus pyogenes M1 GAS # 3 114 1 110 119 111 58.0 3e-25 MPMKKSYRVKKEKEFQQVFNKKQSCANRRFVVYVLEKPQQAHFRVGISVGKKIGNAVTRN AVKRKIRASLFQLKDRISPEIDFIVIARPGLEKLSSEEVKANLTHVLNLAKILDVREGIE >gi|237663590|gb|GG668928.1| GENE 108 118175 - 119002 993 275 aa, chain + ## HITS:1 COG:L131778 KEGG:ns NR:ns ## COG: L131778 COG0706 # Protein_GI_number: 15672111 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Lactococcus lactis # 23 266 21 267 269 270 57.0 2e-72 MKKYKRLLLMAGLVTLVFVLSACGTAPVSESSTGIWDRYIVYYFAQAIKFLSLGGSVGIG IILFTLVIRIILLPLMHFQTKSMRKTQELQPQLKALQQKYSSKDPETQRLFREEQQRLYA ENNVNPYIGCLPLLVQLPIMMALYQAISRVPELKEGTFLWLSLDKPDPYLILPILAAVFT FASTYLSSMSQLETNASLKIMNYVMPAMIFFMGISLASSLSLYWVVSNAFQTGQTLLLNN PFKIRKEREEAARQAKARERALERAKSPKKKGKKK >gi|237663590|gb|GG668928.1| GENE 109 119017 - 119793 1071 258 aa, chain + ## HITS:1 COG:lin2985 KEGG:ns NR:ns ## COG: lin2985 COG1847 # Protein_GI_number: 16802043 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Listeria innocua # 63 256 11 206 206 139 41.0 5e-33 MPIYEGNTIEEATQKGLQALGLTKEDVTIDVLDEGKKGFLGLGKKLAQISMEPTISEQVT EAVEETVEDIVVADEATAVEEAVEELTEAIPSLSEESTHSLENLEDEAAITELAMYLTNI SNELNAPAMVRIARENGNIIFHLETEKQGILIGKHGKVLNALQYLAQVFIHRIASNKLSI VVNVGNYREKRHEILERLAKRTAEKAKRTGRPVFLEPMPAFERKQIHHTLSKDEQIKTHS EGDEPYRYLVVEPVKKYF >gi|237663590|gb|GG668928.1| GENE 110 120133 - 120855 601 240 aa, chain + ## HITS:1 COG:BH0820 KEGG:ns NR:ns ## COG: BH0820 COG0745 # Protein_GI_number: 15613383 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 1 229 1 228 234 131 33.0 1e-30 MRTEKILVVDDDAAVRRLIWKALQSTGILIYQSESIEKTKDIVSRVTFDLFILDDNLEHD SDGYYLVQMIREKYPLVPIIFFSSKKEEEDIIAALEMGVDSYITKPFSLNVFKAQVIASL NRARMIRKQLNVYKKEELQVGDFRFDYGRYQLFKKDLPISLSSKEVQLIQFFLENPEQVF SKEQIYSSVWGTGDVDANTIMVFINRLRSKLEENPKEPCYLRTVWGIGYTFTPDGCVQKK >gi|237663590|gb|GG668928.1| GENE 111 120899 - 121594 854 231 aa, chain - ## HITS:1 COG:SPy1179 KEGG:ns NR:ns ## COG: SPy1179 COG1802 # Protein_GI_number: 15675151 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 229 1 229 231 258 61.0 5e-69 MNPTVEAVKRNLDLTSSKPLKICTYEAFKKTIILGDIPAGERINEKEFSEQLNISRTPIR FALQELVKEQLVEHIPMVGIVVKGISMKDAYEIYDIRKSLDTLATIKAMELMTPEDFDEL EALLLEGEQYNKNNQVDDLLQNFSDFNSFIYTKSQMLRLKKIVTDLHAYLIYFRDIAIRA SERRSIALEEHWLIFRGMKTKNIDQITLLTHEHLNRSLQFILKEMERRQIE >gi|237663590|gb|GG668928.1| GENE 112 121728 - 123125 1659 465 aa, chain - ## HITS:1 COG:SPy1180 KEGG:ns NR:ns ## COG: SPy1180 COG2851 # Protein_GI_number: 15675152 # Func_class: C Energy production and conversion # Function: H+/citrate symporter # Organism: Streptococcus pyogenes M1 GAS # 1 464 2 468 468 588 74.0 1e-168 MLLTILAYGMIIIFMYVIMKKKLSPFTSLVIIPLIFTLIAIATGVASPPPGADGVVPEVN IGNFVLDGISTTSKTGIMLLFAILYFSIMLDAGLFDPITKKMIYFAKGDPMKVLMATAVV AAAVSLNGDGTTTTLICCSAFIPIYKKLNMKLMNLGVLVILQNTIMNLLPWGGPTARAMA VLEVDADILSYLAPGMILSVLYVIFFVAYRMGKKERARLGVTTLTDKELEEMTIVNDPEL LEIRRPKNFAFNGILTIVLIGWLVLSSFVGQLGLPSWIEMPPLLLFLVGTCIALMINYPK LKDQSSRISANAGDAVQVVILVFAAGVFMGLFQGSGMANALANSFVNIIPKQLAGAWGLV IAFISAPGTFFISNDGFYFGVLPVLAEAGRSYGFDNMSMALASLMGQAFHLLSPLVAFIY LLLRLTGLDMGQWQKESAKYALGIFVIFVVTIVALGHMPLFIPQN >gi|237663590|gb|GG668928.1| GENE 113 123529 - 123891 349 120 aa, chain + ## HITS:1 COG:no KEGG:EF3326 NR:ns ## KEGG: EF3326 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 120 1 120 120 177 100.0 9e-44 MGLFKSLFKKEQHTQDTEINESVIQREADNLEKRWIDIPAYIPAEPKEYQLVSIVATAIA AGEFPESRFVIKKIAKRNPEAKEVAIIAASIAAELSEESQLVVKRISKQNLEEDHYVTQI >gi|237663590|gb|GG668928.1| GENE 114 123875 - 124276 554 133 aa, chain + ## HITS:1 COG:SPy1183 KEGG:ns NR:ns ## COG: SPy1183 COG0511 # Protein_GI_number: 15675154 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Streptococcus pyogenes M1 GAS # 1 132 2 131 132 119 67.0 1e-27 MLRKFKISIDGKEYLVEMEEIGGVPQPAPVVPQPTAPVATTETPAPAVEEAPAPAAQPAA PAGADAMPAPMPGTVLKVLVNVGDTVSENQPLLILEAMKMENEIVAGKAGTVTGIHVTQG QIVNPGEPLITIN >gi|237663590|gb|GG668928.1| GENE 115 124306 - 125421 1504 371 aa, chain + ## HITS:1 COG:SPy1184 KEGG:ns NR:ns ## COG: SPy1184 COG1883 # Protein_GI_number: 15675155 # Func_class: C Energy production and conversion # Function: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 371 1 373 373 463 77.0 1e-130 METLIQGVIGMGQEPGRIVMMLIGGLLMYLGIKKEYEPTLLVPMGLGTILVNFPNSGVLS AGGEPGPFNVLFDFGIKTELFPLLLFIGIGAMIDFGPLLQNPFMLMFGAAAQFGIFFTVI MAVLLGFDLNDAASIGIIGAADGPTSIFVANTLHSKYMGAIMVAAYSYMALVPIIQPVAI KAVTTKAERRIRMTYRAGEVSQTAKILFPVVITIVAGLIAPVSLPLVGFLMFGNLLRECG VLDRLSITAQNELVNIISILLGLSISVSMNYAEFLKVDTLMVIGLGLVAFIMDSVGGVLF AKFLNLFRKEKINPMIGAAGISAFPMSSRVIQKMATDEDPQNFILMHAAGANVSGQIASV IAGGLLLAFLT >gi|237663590|gb|GG668928.1| GENE 116 125443 - 125577 264 44 aa, chain + ## HITS:1 COG:no KEGG:EF3323 NR:ns ## KEGG: EF3323 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 44 1 44 44 66 100.0 4e-10 MSVNMEDLKIAFELLGFGWGGVFVVLFIIYLASKLLTKLFPIKK >gi|237663590|gb|GG668928.1| GENE 117 125592 - 126602 1035 336 aa, chain + ## HITS:1 COG:FN0319 KEGG:ns NR:ns ## COG: FN0319 COG3053 # Protein_GI_number: 19703664 # Func_class: C Energy production and conversion # Function: Citrate lyase synthetase # Organism: Fusobacterium nucleatum # 15 329 10 325 345 233 41.0 5e-61 MSSVYTMKRIWLQKDKKAYQAWRELMEKAELQTTEALDYTVGIYDDTALIASGSLSGKTI KCVAVCKKYQSENLLTQLVVHLLEKLREENQLHSFLYTKPKNEQIFQSLGFQKVVANQEV LFMEQGKPDFADYLGYLTQHKKAGPASSIVMNANPFTKGHQYLVEKAAKESPHVYVFVLS EDKSLFSKEARFAMVQKGVAHLPNVTVLSTEDYLVSSATFPTYFLKEKAPLEVAAIQATL DATLFKERIAPILEIQQRYVGEEPYSEVTAVYNQAMQQVFGQTITLTIVPRLASDGELIS ATKVRKAMAEGDKETLKKFLPATSYQYLVEHKKLMR >gi|237663590|gb|GG668928.1| GENE 118 126608 - 126916 409 102 aa, chain + ## HITS:1 COG:SPy1186 KEGG:ns NR:ns ## COG: SPy1186 COG3052 # Protein_GI_number: 15675156 # Func_class: C Energy production and conversion # Function: Citrate lyase, gamma subunit # Organism: Streptococcus pyogenes M1 GAS # 1 102 1 102 102 109 59.0 1e-24 MKIIKNATAGTVESSDIMITVQPIESTENTIELESSVEKQFGNQIRQVITTTLEHLDVQG VAVKAIDKGALDCTIKARMITVLHRGAEKETYDWKELDSWNV >gi|237663590|gb|GG668928.1| GENE 119 126904 - 127791 1088 295 aa, chain + ## HITS:1 COG:SPy1188 KEGG:ns NR:ns ## COG: SPy1188 COG2301 # Protein_GI_number: 15675157 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 295 1 295 295 436 83.0 1e-122 MERLRRTMMFVPGANAAMLRDAPLYGADSIMFDLEDAVSLKEKDSARVLVHSALKTFDYG NIEIVVRINALDAGGAEDIEAMVLAGVDVIRLPKTETAQDIIDVEAVITEVEQQNDIPVG TTKMMAAIESAEGVLNAPAIAKSSTRLIGIALGAEDYVTNMKTRRHPDGQELFFARSMIL HAARAAGIAAIDTVYSDVDNTEGFEAEVRLIKQLGFDGKSVINPRQIPLVNTIYAPTEKE IQNAKEVIWGIREAEAKGSGVISVNGKMVDKPIVERAERVIALALAAKLITEEEI >gi|237663590|gb|GG668928.1| GENE 120 127794 - 129326 1860 510 aa, chain + ## HITS:1 COG:SPy1189 KEGG:ns NR:ns ## COG: SPy1189 COG3051 # Protein_GI_number: 15675158 # Func_class: C Energy production and conversion # Function: Citrate lyase, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 510 1 510 510 842 84.0 0 MVVNKVGKDIPQSYAEQYGIYEGELAHIDAYQEASRAIKPVKPRETKLLGSIREAIEKTG LKDGMTISFHHHFREGDYVMNLVLAEIAAMGLKNISIAPSSIANVHEPLIEHIKNGVVTN ITSSGLRDKVGAAISAGIMENPVVIRSHGGRARAVAAGDIHIDVAFLGAPSSDAYGNANG TKGKATCGSLGYAMVDAKYADQVVIITDTLVPYPNTPISIPQTDVDYVVEIDAIGDPDGI AKGATRFTKNPKELLIAEYAAKIITHSPYYKEGFSFQTGTGGSSLAVTRFMREQMLKDGI KASFALGGITNAMVELLEEGLVEKIIDVQDFDHPSAISLGENANHYEIDANMYASPLSKG AVINQLDTAILSALEVDTDFNVNVITGSDGVIRGASGGHSDTSMACKMSLVIAPLVRGRI PTIVEQVNTVVTPGTSVDVVVTEVGIAINPKRTDLIDCFKTLDVPQFTLEELKDKAYNIV GTPEPIKYGDKVVALIEYRDGSLIDVVRNV >gi|237663590|gb|GG668928.1| GENE 121 129307 - 129855 489 182 aa, chain + ## HITS:1 COG:SPy1190 KEGG:ns NR:ns ## COG: SPy1190 COG3697 # Protein_GI_number: 15675159 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) # Organism: Streptococcus pyogenes M1 GAS # 6 173 7 175 192 143 47.0 2e-34 MWYAMFNGEKVTLLEMLDAREQRAATQKELLETAPEASLLSATMNIPGEVKNSPTLTAVF LEVIDEVEQQLLDQVPIVNFYRNEKTGPEYYLAVSLAPQELKQRMVKIEETHPYGRLVDL DVLWGNEELKSLHRGDLGLPPRRCFVCQEEAKVCGRNRRHSLEAMQEKITEIILTRKEQP SE >gi|237663590|gb|GG668928.1| GENE 122 129848 - 131245 1683 465 aa, chain + ## HITS:1 COG:SPy1191 KEGG:ns NR:ns ## COG: SPy1191 COG5016 # Protein_GI_number: 15675160 # Func_class: C Energy production and conversion # Function: Pyruvate/oxaloacetate carboxyltransferase # Organism: Streptococcus pyogenes M1 GAS # 4 465 8 469 469 745 78.0 0 MSKKIRFTETVLRDGQQSLIATRMPTSDMLPIIKTMDEAGFHALEMWGGATFDSCVRYLN EDPWERLRQIRKEVKNTKLQMLLRGQNLLGYRHYADDVVRAFVEKSVENGIDIIRIFDAL NDVRNLQTAIQTTKEAGGHCQAAISYTTSEIHTIDYFVKLAKELSQTGADSICIKDMAGV LTPQTGFELVSKMKDAIDLPLEVHTHATSGISEMTYLKVAEAGADIIDTAISSFAGGTSQ PATESVAIALEDLGFETGLNMEKVTEIADYFNPIRDRFRSEGILNPKVKDTEPKTLIYQV PGGMLSNLLSQLTEQGLQDKYEEVLAEVPKVRADLGYPPLVTPLSQMVGTQALMNVISGE RYSLIPNEIKDYVRGEYGKSPAPIAEEIKQKIIGDEEVITCRPADLLKPELHSLEKEIQQ YAKSEEDVLLYAMFPQQGKDFLGRREDPFYDVPLQKVTVKLDLPE >gi|237663590|gb|GG668928.1| GENE 123 131363 - 132535 1219 390 aa, chain + ## HITS:1 COG:L3227 KEGG:ns NR:ns ## COG: L3227 COG0281 # Protein_GI_number: 15673168 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Lactococcus lactis # 2 380 4 380 380 380 54.0 1e-105 MLEEVLAIHQKNIGVLSLEATEAVLNHHDLAKMYTPGVAELSLMIAQNHELAREWTISGK LIAVITDGSAVLGLGNMGTQAGLPIVEGKALLYKNLAGVDAIPLALEQKSVDEMVQTIEN LQNSFAGIHLEDISAPKCFEIEEKLQQRLNIPVYHDDQEGTAIVVLAGLINAAKIKGKPL NELRVVINGVGASGVATAKLCIQAGITHLTLVDRQGVLREEDPTLNPYQRALLRQVIKPS VENKDLATAVVNQDVFLGLSEADVLTPALIKSMNQDPIIFALANPKPEIEPALAQANGVR LLATGSSKYPNQVNNILAFPGLFKGLLAAKGRKVDVGLQMTVARSLAAMISEPTAEKFIP NVFDGGVVDTVFNAVLDYIKQEKTMAEEGT >gi|237663590|gb|GG668928.1| GENE 124 132542 - 133411 836 289 aa, chain + ## HITS:1 COG:VC0801 KEGG:ns NR:ns ## COG: VC0801 COG1767 # Protein_GI_number: 15640819 # Func_class: H Coenzyme transport and metabolism # Function: Triphosphoribosyl-dephospho-CoA synthetase # Organism: Vibrio cholerae # 16 284 39 308 313 157 38.0 2e-38 MTKQARSKLAQQAQLALLYEVTCLNKPGLVDPVDAGAHQDMDVFTFLESSVVLTPYFETF VQAGTELRHLPIEATFRAIRQVGLEAERAMFEATEGINTHKGAIFSLGIFLAICGRLMIW ETPCTLQLFQQTLQTMTQDLLADFENLATNELEKLTWGERLFVQYGLTGIRGEAQQGYPA VFKQGVPYYQKHQGTQQQKLIDTLLYLSLYVEDTNLIKRSQNVQIFEIYQPLIQEYFALG GTQTLRGTLCLERLNHLFKEKNWSIGGSADALILVVFLDKLMKLNWLTP >gi|237663590|gb|GG668928.1| GENE 125 133396 - 133569 109 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|307268895|ref|ZP_07550259.1| ## NR: gi|307268895|ref|ZP_07550259.1| hypothetical protein HMPREF9498_01025 [Enterococcus faecalis TX4248] hypothetical protein HMPREF9498_01025 [Enterococcus faecalis TX4248] # 1 57 1 57 57 91 100.0 2e-17 MADALIKKIVTTLIWSVILTLYAYGKVSREFKKAIDKYHETQYILLRNHSYQSIQIR >gi|237663590|gb|GG668928.1| GENE 126 134201 - 135400 1237 399 aa, chain + ## HITS:1 COG:no KEGG:EF3314 NR:ns ## KEGG: EF3314 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 396 17 412 1744 539 99.0 1e-152 MKKKIVEDFNRKSQHKKWTKRKMLNLAISSGLLFTSLAIPVSIAVTSGTISASAAVLDIE LLSNVTSNNDSGTSTSNRWTAANQNQPVNFTVSGGALADASAVFSGQKQAVLVVPPELRG NVAAAGNAAINTNVTIDLSKVTFLTAVLNAANDLTNVITQITSGALGNLTGVDIDLTEVN RQLELVNNIENLGAASFTAPETLAADGSYISAPISDGLGLVLAQNVSNILQDLNAAVQAL EAKGTSIPSNLVAAAINAALLPVKGTVNVAVSGALPLLAVGGSGVNELVDASLLGTTTVT LPTTVSTPQNLSNNLDARFVGTVVQTDLLDVNLLATADGVSNIYFAAGTTSEVTAPTITG VTGNSTAGYEVKGTADANATVEIRNAGGTVIGTGTALAS >gi|237663590|gb|GG668928.1| GENE 127 135809 - 138856 3674 1015 aa, chain + ## HITS:1 COG:BH2080 KEGG:ns NR:ns ## COG: BH2080 COG1404 # Protein_GI_number: 15614643 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus halodurans # 19 345 741 1047 1052 104 30.0 1e-21 MATPIVETVTGSTTKGYEVKGTAEVGTTIEVRDAAGTVLGTATTGTDEKYTVTLAPGKAT ANQTLSVVAKNASGTESQPATATTPADVTAPTVDNITGNSGSGYEITGTADPNTTIEVRD PAGAVIGTGTSDANGDFTVTLPTGTTNPGDTLTVIGKDNAGNESQPTEVLVPADATVTAP TVTGVTGNSVAGYQVTGTADPNATIEIRDVDGNVIATGTADGTGSFAVNLPAGTANANET LTALAKDPAGNPSTPTTFQTPADEVVAPPSVDKITGNTTQGYQVTGTAELGTTIEVRATD GTVLGTATTGPTGQYTVTLASGKATAKQTVNVVAKNDTGLESQPTTAMTPADVTTPTIGD ITGDSTTGYEITGTADPNTTIEVRNPDGTIIGTTTTDDQGNFTVDLPAGAANPGDTLTVV GKDGDGNESQPTEVTVPEDATVAAPTVTTVTGTTATGYQVTGTAEPNVTIEIHNEAGLVI ATGTTDGAGAFTITLPTGTATANEALTAIAKDAAGKESNPTAFKTPADPDAPVATPTVDK ITGSTTKGYQVVGAAEVGTTVEVRDADGTVLGMATTGTDGKYTVTLEPGKASANETITVV AKNATGKESQPATATTPADLATPTIDSITGNSSKGYEITGTAEPKTTIDVRDADGTIIAA TTANETGQYTVTLPAGVVTPGETITIISKDSAGNESQPATAVIPADVVLAAPTITKVEGN KANGYTVTGTADPNVTVQFYNSSEKLLASGNTTTGGTFSVHIAAGLATEKETLTALTTDT QGNVSPKTTFMTPADITGEPEIKIAAPTVSSVLGTSKAGYLIKGTAEPNRIIQISNRLLR SVIAVGATDAEGNFAIQLTAGQATAQQSLLATATDGAGHYSTATTFMTPADPTNPGGGNG NTGGNNGNTGGNTGNNGATGGNNGNGSNTGSNPNGGSGLGTTGSGLGSLGNGLGTNGSGY NPKLSTISYGTGNHGKTGYLPSTGEKESSAVTTSLFGAFVAFLASMGIIKRKRKN >gi|237663590|gb|GG668928.1| GENE 128 139089 - 140486 1812 465 aa, chain + ## HITS:1 COG:lin2943 KEGG:ns NR:ns ## COG: lin2943 COG0486 # Protein_GI_number: 16802002 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Listeria innocua # 6 465 1 457 457 606 71.0 1e-173 MQSATMEFDTIAAISTPPGEGAISIVRLSGEQAVAIANKVYRSGTKDLAKVPTHTIHYGH IVDPQNDQLIDEVMLSVMRAPKTFTREDVVEINCHGGIVVVNQLLQLLLREGARMAEPGE FTKRAFLNGRMDLSQAEAVMDLIRAKTDKAMNVALNQLDGNLSALIRSLRQEILNTLAQV EVNIDYPEYDDVEELTTKLLLEKAEFVKAQIQQLLTTAKQGKILREGLSTAIIGRPNVGK SSLLNHLLREEKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDIVERIGVERS RKALADSDLILLVLNQSEELTEEDRQLLEATKGLKRVILLNKMDLPTKLDPNELQELVPA EEILSVSVLSNTGLDQLETKIADLFFGGQTGEKDATYISNTRHIALLDQAALSLQEVING IEAGMPVDLVQIDMTRCWDYLGEIVGDSVQDELITQLFSQFCLGK >gi|237663590|gb|GG668928.1| GENE 129 140506 - 142404 2285 632 aa, chain + ## HITS:1 COG:lin2942 KEGG:ns NR:ns ## COG: lin2942 COG0445 # Protein_GI_number: 16802001 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Listeria innocua # 1 630 1 627 629 910 74.0 0 MNQYQAESYDVIVVGAGHAGSEAALAAARMGVKTLLLTINLDMVAFMPCNPSVGGPAKGV VVREIDALGGEMGKNIDKTYIQMRMLNTGKGPAVRALRAQADKHAYATEMKHTIEKEENL TLRQGIVEELIVEDGVCRGVVTSTGAAYRSQAVVITAGTALRGEIIIGELKYSSGPNNSQ PSVGLANHLKELGLEIDRFKTGTPPRVKSSTIDYSVTEEQPGDKEPNHFSYSTPDSAYNQ NQEPCWLTYTNETTHEIIQKNLHRAPMFTGIVEGVGARYCPSIEDKIVRFADKPRHQLFL EPEGLNTEEVYVQGLSTSLPEDVQTEMLHSIEGLEKVEMMRTGYAIEYDVVVPHQLRPTL ETKVIENLYTAGQTNGTSGYEEAAGQGLMAGINAALKIQGKEPLVLKRSDGYIGVMIDDL VTKGTNEPYRLLTSRAEYRLILRHDNADLRLTEMGHEIGLVKEEQYAAYLVKKAAVEAEI ARLGKHRIKPTKEVQAFLETKGAAGLKDGILARDFLKRPEISYQEVAQFIPAPEEALDPK VIEQVEIQIKYEGYIKKAMEKVEKLKRMEAKRIPENIDYQAINGLATEAKQKLQKIQPET IAQASRISGVNPADISILMVYIEQGKIAKVQG >gi|237663590|gb|GG668928.1| GENE 130 142576 - 143376 915 266 aa, chain + ## HITS:1 COG:Z5618 KEGG:ns NR:ns ## COG: Z5618 COG1028 # Protein_GI_number: 15804613 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 EDL933 # 1 266 1 268 268 323 61.0 3e-88 MTDWLGIKGKVVIVTGGSSGIGRSIVESLLAQEVYVANFDISASETQHEHLLFVKVDVTS RAEVEAGVAQVVEKFGTVDGLVNNAGINIPRLLVDKNHPHGPYELSDEVFDKIVAINQKG LYLMSQAVGRILVQKQAGVIINMSSEAGLEGSEGQSAYAATKAAVSSYTRSWAKELGKSN VRVVGIAPGIMEETGLRTLAYEEALAYTRNISVEQLRAGYSKTSTIPLGRSGKLHEVADL VCYYLSDRSSYITGITTNVAGGKTRG >gi|237663590|gb|GG668928.1| GENE 131 143392 - 145254 1377 620 aa, chain + ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 28 456 28 481 499 94 20.0 4e-19 MTLVNRWYQVIKLLVDHKGMSLQELQEKLAASPQTVRKNIDTLNDELIGIAQIIQKENLF QLEINNFEGFEEVLSGRLKRESDFNSSSKRVSYIIKRLIEEDQFISTYDLSEELAVSRGT VNKDIKRMKELIAPWQVAVVGTPNRGIHLEGKEFDLRLLHVNYVQEYFEEQFLHETTKQM IQKIIKETRLAKQDSFLLRRVVSIVLQRVLAGKLITELPPEYVDYVRHNEQIEELMYHLE ITYNVTLSQWERSFISFPFNINTNHIRNSLLTDEGLLADYFQKMMKKIHHSVVVEFDEDF LFSEMKDHLRNVMNRLVFHVECHDLFYGEIERQYPLAYELAKIGLQELGRLLNRCVPTVE FGYLALYFELALRGNYEAGAKKEIAVICSTGHGTALIIQRQLEKVLGPDVQIAHFSEEEA ERRELNQYFAIFTTIPLKNIRPQTPMIHLTNLFNDTWLRNEWQRAKEIRSVESQNIHMTY QLLENTQGYRANIQKMIADLEAEKLVDPQFIERIFTREDQQTTIFESGIAFPHTINQALS TIILSIGVFEESLVTPEGKVDVILLLGIPEELTATVEAELLQLYDRLFTIAGDERLRNEL RKQRDVLAVKEWMQRKGIII >gi|237663590|gb|GG668928.1| GENE 132 145251 - 145736 551 161 aa, chain + ## HITS:1 COG:no KEGG:EF3308 NR:ns ## KEGG: EF3308 # Name: srlR # Def: transcriptional regulator SrlR # Organism: E.faecalis # Pathway: not_defined # 1 161 1 161 161 302 100.0 4e-81 MSFIYVFGALFLTAYFVQIAMGMKQIKHFNQNYQELRQLGKVAIGRRAGKLKAGTIILFA VDSQGKILAARKMQGVTVLAKFHPLPQYVNEDIHYMDHYHPLVQKENKLTQQAMENAREI YLRVELGNYQETQPLTPLNGAKIQWQLWKNKVQTKLKGSVE >gi|237663590|gb|GG668928.1| GENE 133 145736 - 146290 612 184 aa, chain + ## HITS:1 COG:PM1971 KEGG:ns NR:ns ## COG: PM1971 COG3730 # Protein_GI_number: 15603836 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIC # Organism: Pasteurella multocida # 1 182 2 183 184 206 54.0 2e-53 MSYITKFAEGFMHLFQTGAETFISWMTGIVPVVLMLMVAMNTLIAFLGEERVTKVAKLSA KNPVTRYLVLPFLSAFMLGNPMSFTMARFLPEYYKPSYYAAQAQFCHTSNGVFPHINPGE LFVWLGIAQGIDTLGLNSMDLAIRYMFVGILMNFIGGWVTDFTTAYVCKQQGITLSKTVE IAVD >gi|237663590|gb|GG668928.1| GENE 134 146307 - 147302 1211 331 aa, chain + ## HITS:1 COG:PM1970 KEGG:ns NR:ns ## COG: PM1970 COG3732 # Protein_GI_number: 15603835 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIBC # Organism: Pasteurella multocida # 5 330 4 328 329 344 57.0 2e-94 MTYNSIKVVKGNGGYGGPLVITPTEEKHKFIYITGGGEKPAIVDKIVELTGMEAVNGFKT SIPDDEIALAIIDCGGTLRCGIYPKKGIPTINVVPTGKSGPLAQYINETIYVSAVGPKQI TLTSEEAAADTEKPTSKKTEFKYDTSKKITEQKAEQQSFVAKIGMGAGKVVATFNQSARE GVQTMINTVIPFMAFVSLLIGVIQGSGIGEFFANIMAPLAGNIVGLTIIGFICSLPFLSP LLGPGAVISQVIGTLIGVEIGKGNIPPQLALPALFAINTQNACDFIPVGLGLEEAEAETV EVGVPSVLYSRFLNGAPRVLVAWLASFGLYS >gi|237663590|gb|GG668928.1| GENE 135 147326 - 147682 469 118 aa, chain + ## HITS:1 COG:PM1969 KEGG:ns NR:ns ## COG: PM1969 COG3731 # Protein_GI_number: 15603834 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Pasteurella multocida # 2 117 3 118 123 66 29.0 9e-12 MSVFTTKVQSIGPEAELFKEEKMVILFGKDAPDALADYCYNIEVQPVTEAITDKQTLVID EQTYQITAVGEVVLTNLDTLGHITIKFDGATTPELPGTLYVEEKAIPEITVGTTITIL >gi|237663590|gb|GG668928.1| GENE 136 147710 - 148387 816 225 aa, chain + ## HITS:1 COG:SPy2048 KEGG:ns NR:ns ## COG: SPy2048 COG0176 # Protein_GI_number: 15675818 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Streptococcus pyogenes M1 GAS # 1 215 1 216 222 257 62.0 1e-68 MEFMLDTINLEAIRKYQKILPLAGVTSNPSIVKQAGKIDFFAQMKEIKKTIGQASLHVQV VGQTTEEMLEDAQTIVQQLGQETFIKIPVNEAGLAAIKQLKQANYRITATAIYTEFQGYL AIAAGADYLAPYYNRMENLTIDSQKVIEHLAAEIKRTNAKSKILAASFKNVAQVNQACQM GAQAVTIAPELVTQGLAMPAIQKAVTDFQEDWVAVFGVETVKELT >gi|237663590|gb|GG668928.1| GENE 137 148588 - 150360 1556 590 aa, chain + ## HITS:1 COG:L180241 KEGG:ns NR:ns ## COG: L180241 COG4716 # Protein_GI_number: 15672937 # Func_class: S Function unknown # Function: Myosin-crossreactive antigen # Organism: Lactococcus lactis # 1 590 1 587 587 935 73.0 0 MRYTNGNYEAFARPRKPKGVDDKSAYIVGGGLAGLATAVFLIRDGQMKGENIHIFEELTL SGGSLDGKFIPHDGFVTRGGREMENHFECLWDLFRSVPSLEVEDASVLDEFYRLDLDDPN SSNCRIIHNRGERVPDDGQFTLSKKAQKEIVDLFMTSEDQLIGKKIEDVFGEEFFESNFW IYWCSMFAFEKWHSAIEMRRYIMRFIHHIKGLPDFTALKFTKYNQYESLVKPLLSFLTNQ GVDFQYETTINDIQVDIKGATKVARRLLLTQAGKTKEIPLTENDLVFVTNGSITESSTQG DHHTPAPITHELGGSWNLWKNLAKQSPEFGHPEVFCENLPDESWFVSATITWENFDIEPY LSRLTHRKLRTGKIVTGGIITIKDSNWMMSFAMHRQPHFKEQNDQQSITWVYGLLSNKPG NYIKKPIEQCTGQEITQELLYHLGVPEGEIERISEESATTIPVYMPFITSYFMLREPGDR PLVVPNGSKNLAFIGNFADTERDTVFTTEYSVRTAMEAVYQLLEVERGVPEVFASAYDLR VLANSVYYLSDKKKLTEMDMPFVERKMVEHFVKKFEDTYIGDILRENHLI >gi|237663590|gb|GG668928.1| GENE 138 150770 - 151756 969 328 aa, chain + ## HITS:1 COG:no KEGG:EF3301 NR:ns ## KEGG: EF3301 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 328 1 328 328 634 98.0 1e-180 MGRWQKLQQAMSAGVEAAIDAGWDRQAVYGLVESAIKDTRFLPLKQAKTAVAELFSEVEE VGSSAYERLFRFSAYRPQEKLSLLLWQLGAVLDQHGMLQLVGPYRFSKTIAPHATFWHLL AKTVQKAYPLGLLGSFNQEKAKKIHQLRMYIDRQNITYIRDFFKQEGDTDEQALKRYVFA AKPQGMGGRKLKKSSARLHNKYPEGASYSLINKKRLTPNFHSEFILNEEGTFVTQWDVLV EDWRGRLISNPAYYQAAKNSEYQEKVLNGESFNYANRNNRTHELLDSSPPGRFDHQLRKT AKKGWLSPRIQEYDYRRERQIKCDDYSK >gi|237663590|gb|GG668928.1| GENE 139 151799 - 151894 56 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIKEKSAFLCGKKSLAMGQNVQLAATKTAFL >gi|237663590|gb|GG668928.1| GENE 140 152004 - 152720 861 238 aa, chain + ## HITS:1 COG:lin2934 KEGG:ns NR:ns ## COG: lin2934 COG0357 # Protein_GI_number: 16801993 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Listeria innocua # 1 238 1 238 238 306 63.0 3e-83 MLPEEFRQLLAAKGIELTDQQMTQFDQYFHLLVEWNEKMNLTAITEEKEVYLKHFYDSVS LAFFEDFASDKAICDVGAGAGFPSIPLKIVFPSLNVTIVDSLNKRITFLTELVNQLGLAN VSLYHDRAETFGQKAEFRGAFDYVTARAVARLNVLSELCLPLVKKEGYFLALKASKSEEE INEAKPAIATLGGQFQKEVGFTLPITADERHIVVIQKKKETPKKYPRKPGLPNKQPIK >gi|237663590|gb|GG668928.1| GENE 141 152736 - 153497 929 253 aa, chain + ## HITS:1 COG:BH4058 KEGG:ns NR:ns ## COG: BH4058 COG1192 # Protein_GI_number: 15616620 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Bacillus halodurans # 1 252 1 252 253 356 70.0 2e-98 MTRIISVANQKGGVGKTTTTVNLGACLANLGKKVLLIDIDAQGNATSGMGVPKPDVAHDV YDVLVNEEPITSVVQHTSRENLDIVPATIQLAGAEIELTSMMARESRLKLAIDEVRDMYD FVLIDCPPSLGHLTINAFTASDSILIPVQCEYYALEGLSQLLNTIRLVQKHFNPELKIEG VLLTMYDARTNLGAEVVEEVRKYFREKVYDTIIPRNVRLSEAPSHGLPIIDYDIRSKGAE VYQALAKEVLENE >gi|237663590|gb|GG668928.1| GENE 142 153490 - 154380 1074 296 aa, chain + ## HITS:1 COG:lin2922 KEGG:ns NR:ns ## COG: lin2922 COG1475 # Protein_GI_number: 16801981 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 4 296 2 283 283 281 55.0 7e-76 MNKGKGLGRGIDALFQDIAKLEDVDVKNEQVTEILLNELRPNPYQPRKTFDETSLQELAN SILHSGVFQPIIVRKSAVKGYEIIAGERRFRASKLAGKEKIPAIIREFDEESMMQVAVLE NLQREDLNPLEEAEAYEMLMKNLKLTQAEVAERLGKSRPYIANYLRLLTLPDAVKAMVQK QSMSMGQARTLLGLKNKEQLLPLANRCIKDNLTVRQLEQLVAELNETQGKKGKKAKKAIK EKPIYIRESEDRLMDKFGTTVAIQEKEGKGKIEIEYLSSSDLARILDILDIHFDEE >gi|237663590|gb|GG668928.1| GENE 143 154498 - 154683 230 61 aa, chain + ## HITS:1 COG:BH4052 KEGG:ns NR:ns ## COG: BH4052 COG4481 # Protein_GI_number: 15616614 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 2 61 5 64 65 82 61.0 1e-16 MYDLGDIVEMKKPHACQANRWQIIRMGADIKIKCTNCGHIVMMPRRDFTKKLKKVIEKKA D >gi|237663590|gb|GG668928.1| GENE 144 154740 - 155855 1559 371 aa, chain + ## HITS:1 COG:SPy0006 KEGG:ns NR:ns ## COG: SPy0006 COG0012 # Protein_GI_number: 15674254 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Streptococcus pyogenes M1 GAS # 1 371 1 371 371 552 78.0 1e-157 MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDARLQRLTELVKP KKTVPTTFEFTDIAGIVKGASKGEGLGNQFLSHIRQVDAICHVVRCFDDENIMREQNRDA DFVDPLADIDTINLELILADLDSINKRYTRVAKMAKAKDKEAVEELAVLDKIKPVLEEGL SARTIEFTPEEEKIVKSLFLLTTKPVLYVANVSEDEVADPDNNEYVQQVRNFATSENAEV IVVSARAEEEIAELDSEEDKAEFLEAMGIEQSGLDQLIRAAYDLLGLATYFTAGEQEVRA WTFRKGIKAPQAAGIIHSDFERGFIRAETVSYEDLDKYGNMQAAKEAGRVRLEGKDYVVQ DGDVMLFRFNV >gi|237663590|gb|GG668928.1| GENE 145 155968 - 156657 859 229 aa, chain + ## HITS:1 COG:SPy1828 KEGG:ns NR:ns ## COG: SPy1828 COG4858 # Protein_GI_number: 15675655 # Func_class: S Function unknown # Function: Uncharacterized membrane-bound protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 18 224 4 212 218 129 33.0 4e-30 MEAEALRAIVAENRQLEQNLTKRNEQYIFDLKKSLKAANLSEEELALALHGILPELVAGQ KTGKTARQLFGTVSERTEAILNKPAEVKEPAGWMIWLDNTLLLLGLLTIMLAAMSLFSKG TAQPLGLTTYILGAMAGGYVFYLMHKYVYRFDRQGGDKSKRPGWLKTTAILFGGMFLWIA VFAGSAMLPPVINPILDPMIALVIGALAFVARYFFKKKYNIQGSFMTRQ >gi|237663590|gb|GG668928.1| GENE 146 156824 - 158506 1075 560 aa, chain + ## HITS:1 COG:no KEGG:EF3294 NR:ns ## KEGG: EF3294 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 560 1 560 560 938 98.0 0 MGQQVKSWCRQHERLLIFISFLLLSGLSLYFVYFQENFLRASDFRFHQNRVEGLALAIKN NDWFPKINYFFLGGYGYASSLFYPDAYLYLPALLRVLGLSFVASMAIFVFAVNLATFSLT YYAGRLMALSKKRSYLFAILYGLSIYRMQDLFNRQALGEFLALSFFPLVLASLFLLRKGT TKCWPLLTLAMTGIGLAHFISIEMVSIWIGLYILFYWQQFFKKEVLWALAKAAGLTLLWL AFYLLPVAEQMKNQVFKVTSNPLTYISERSYPIVSLFINSLKSSVFHAKTANLGTLLFVG LVVAVVSLASKKIQNKRFIGLTLVLLLMVTTLFPWHLLNHTPLNTIQFPWRFLGILSVML AFFIAQDEWGVFRKSWTMALLVFLAVSNLGIYQYQSIQSQQGRLLTKAEYEQPAPFYIGA GHEYLPDEINYQELLKQKKRPLDYSAEQVTITNVRMPYGKISFDYQVVKQSAKVTVPFIY YLGYQATIQMKNQTGAKKMSLTNQGGLAALSLSGTGHVDIRYQRTKVQKIGTMITLLSVG GFGFSRFLQQKKKHKIKEQR >gi|237663590|gb|GG668928.1| GENE 147 158664 - 158771 194 35 aa, chain + ## HITS:1 COG:SP2228_1 KEGG:ns NR:ns ## COG: SP2228_1 COG0516 # Protein_GI_number: 15902032 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Streptococcus pneumoniae TIGR4 # 1 35 1 35 99 63 82.0 1e-10 MSNWETKFAKKGLTFDDVLLIPAESHVLPNDVDTS >gi|237663590|gb|GG668928.1| GENE 148 159196 - 160446 1747 416 aa, chain + ## HITS:1 COG:L21264_3 KEGG:ns NR:ns ## COG: L21264_3 COG0516 # Protein_GI_number: 15672202 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Lactococcus lactis # 132 416 1 285 285 457 84.0 1e-128 MTVAQQADEVRKVKRSESGVIIDPFFLTPTNLVADAEELMSRYRISGVPIVETMENRKLV GIITNRDMRFVTDYQIKIEEVMTKDHLVTAPVGTSLKDAEKILQKHKIEKLPIVDEAGRL SGLITIKDIEKVIEFPNAAKDEHGRLLVAAAVGVTSDTFERAEALLEAGADAIVIDTAHG HSAGVIRKIKEIRETFPEATLIAGNVATAEATKALYDVGVDVVKVGIGPGSICTTRVVAG VGVPQLTAIYDAASVAREYGKAIIADGGIKYSGDIVKALAAGGHAVMLGSMLAGTDESPG EFEIYQGRRFKTYRGMGSLGAMEKGSSDRYFQGSVNEANKLVPEGIEGRVAYKGSVSDIV FQLIGGLKSGMGYVGAADLKALREEAQFVQMSGNGLKESHPHDVQITKEAPNYSVQ >gi|237663590|gb|GG668928.1| GENE 149 160658 - 161929 1598 423 aa, chain - ## HITS:1 COG:SP0411 KEGG:ns NR:ns ## COG: SP0411 COG0172 # Protein_GI_number: 15900330 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 423 1 423 424 609 73.0 1e-174 MLDVKMMRQNFDEVKAKLQTRGVKEEILVEFLRLDESRRDLLVKVEEMKKYRNDVSAEIA QLKRNKEDATAKIAEMKEVGGNIKALDAEINAIDEELRGITTTLPNLPDASVPVGAGEEE NVEVRRWSEPRTFAFEPKPHWEVAENLGILDFERGAKVAGSRFVYYKGLGARLERALYNF MLDLHVYEHGYTEMITPYIVNDTAMFGTGQFPKFKEDVFQLQDTDLTLIPTAEVPLTNYY NNEILDGKDLPIYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSDAEHSYEELE KMTNNAEEILQKLGLPYRVMALSTGDMGFSAAKTYDLEVWIPAQETYREISSCSNCEDFQ ARRAMIRYRDENDKVQYAHTLNGSGLAVGRTVAAILENYQNEDGSVTVPEVLVPYMGNLT VIK >gi|237663590|gb|GG668928.1| GENE 150 162158 - 162310 93 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFARTPANSLEFSAINTFSLSFLFSIEYRKSSGMSINSLISCWYAVRVDE >gi|237663590|gb|GG668928.1| GENE 151 162264 - 163445 1319 393 aa, chain - ## HITS:1 COG:lin2515 KEGG:ns NR:ns ## COG: lin2515 COG0642 # Protein_GI_number: 16801577 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 76 384 76 379 380 189 36.0 8e-48 MLVKPKKIEKQKRITLTSKEISELLAEAIVTIVLLLLLNVSIMFLLGQLLSENSPLAGVI WATKDAVAKELNTDLFWSWNKFVLPIFFLVDAAVLYWRLIRRYHQMQLRHIISELHYISD GNYNHRIPFELSGDLAKVVTSINGLVDSTVAAIEDERRIEKSKDELITNVSHDIRTPLTS IIGYLGLIEDRQFHSQEDLLKYTHTAYVKAKQMKLLVDDLFEYTKVRQPSVPIHTTTFDM VQLIEQLAADFELEAKKINMQIQVKANPASLMMEGDTEKLVRVFNNLLSNALKYGKGGHH IVMEVDKVGTEAIIAVRNDGPAIPKHSLDQLFDRFYRVEESRSQETGGTGLGLAIAQSIV ALHGGYIYAKSDQKWTSFIIHLPLQRTNKKSES >gi|237663590|gb|GG668928.1| GENE 152 163435 - 164124 831 229 aa, chain - ## HITS:1 COG:lin2516 KEGG:ns NR:ns ## COG: lin2516 COG0745 # Protein_GI_number: 16801578 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Listeria innocua # 3 227 5 230 231 229 53.0 4e-60 MKILVADDDKEIVELLSIYIHNEGYEVVKAYDGKEALSKLHTTPDIDLLILDIMMPIMDG MEVVKELRKESQIPIIMLTAKTTDMDKIKGLVAGADDYVTKPFNPLEVMARVKSILRRSQ MQLTKEEPDELEVGPLMINKDSHEVKTIEGKEIQLTALEFGILYLLASHPNRVFSADEIF ERVWQQESIVSAKTVMVHVSHLRDKIEEATGGEKVIQTVWGVGYKIDAR Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:09:43 2011 Seq name: gi|237663589|gb|GG668929.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD8, whole genome shotgun sequence Length of sequence - 89425 bp Number of predicted genes - 83, with homology - 79 Number of transcription units - 39, operones - 22 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 167 - 604 264 ## COG2801 Transposase and inactivated derivatives - Prom 676 - 735 5.0 2 1 Op 2 . - CDS 902 - 1018 72 ## gi|227553896|ref|ZP_03983943.1| transposase - Prom 1082 - 1141 80.4 + Prom 1367 - 1426 80.3 3 2 Op 1 . + CDS 1663 - 2034 456 ## COG2259 Predicted membrane protein + Term 2087 - 2128 3.3 + Prom 2217 - 2276 9.0 4 2 Op 2 . + CDS 2305 - 4911 1614 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 4916 - 4949 5.4 - Term 4895 - 4945 14.9 5 3 Op 1 . - CDS 4946 - 5425 535 ## COG3613 Nucleoside 2-deoxyribosyltransferase 6 3 Op 2 . - CDS 5449 - 6669 1187 ## COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases - Prom 6816 - 6875 7.0 + Prom 6739 - 6798 7.0 7 4 Tu 1 . + CDS 6916 - 8751 1925 ## COG0481 Membrane GTPase LepA + Prom 8832 - 8891 7.0 8 5 Op 1 . + CDS 8950 - 9879 531 ## COG1396 Predicted transcriptional regulators 9 5 Op 2 . + CDS 9925 - 10008 65 ## 10 5 Op 3 . + CDS 9980 - 11359 516 ## EF2349 hypothetical protein 11 5 Op 4 . + CDS 11349 - 11867 307 ## EF2348 hypothetical protein + Term 11921 - 11990 30.7 + Prom 12253 - 12312 4.5 12 6 Op 1 . + CDS 12334 - 13257 323 ## COG0433 Predicted ATPase 13 6 Op 2 . + CDS 13272 - 13448 124 ## EF2350 Cro/CI family transcriptional regulator + Term 13480 - 13515 5.3 + Prom 13461 - 13520 3.9 14 7 Tu 1 . + CDS 13540 - 15819 1915 ## COG4932 Predicted outer membrane protein + Prom 15821 - 15880 80.3 15 8 Op 1 . + CDS 15979 - 16764 561 ## EF2347 cell wall surface anchor family protein + Term 16804 - 16846 3.3 16 8 Op 2 . + CDS 16877 - 17191 504 ## EF2346 hypothetical protein 17 8 Op 3 . + CDS 17204 - 17575 475 ## EF2345 hypothetical protein 18 8 Op 4 . + CDS 17585 - 17929 347 ## EF2344 hypothetical protein + Term 17945 - 17981 4.2 19 9 Tu 1 . + CDS 17997 - 19343 775 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Prom 19348 - 19407 5.9 20 10 Op 1 . + CDS 19449 - 19907 320 ## EF2342 hypothetical protein 21 10 Op 2 . + CDS 19897 - 20718 690 ## EF2341 hypothetical protein + Term 20742 - 20784 7.9 22 11 Op 1 . + CDS 20799 - 21941 468 ## COG0270 Site-specific DNA methylase 23 11 Op 2 . + CDS 21967 - 22200 330 ## EF2339 hypothetical protein + Prom 22361 - 22420 80.4 24 12 Op 1 . + CDS 22649 - 23833 716 ## COG2946 Putative phage replication protein RstA 25 12 Op 2 . + CDS 23848 - 23967 170 ## 26 12 Op 3 . + CDS 23972 - 24193 335 ## EF1883 hypothetical protein 27 12 Op 4 . + CDS 24206 - 24706 492 ## EF2335 hypothetical protein + Term 24710 - 24746 6.8 - Term 24696 - 24736 9.4 28 13 Op 1 . - CDS 24739 - 25311 382 ## lin1083 hypothetical protein 29 13 Op 2 . - CDS 25327 - 25941 499 ## EF2282 hypothetical protein - Prom 25978 - 26037 12.3 + Prom 25917 - 25976 7.1 30 14 Op 1 . + CDS 26018 - 26407 170 ## EF2281 hypothetical protein 31 14 Op 2 . + CDS 26394 - 26738 381 ## EF2280 hypothetical protein + Prom 28540 - 28599 80.3 32 15 Op 1 . + CDS 28847 - 30961 1102 ## EF2279 hypothetical protein 33 15 Op 2 . + CDS 30958 - 31980 845 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 34 15 Op 3 . + CDS 31980 - 32888 556 ## EF2277 hypothetical protein + Term 33079 - 33121 6.4 - Term 33063 - 33113 11.6 35 16 Tu 1 . - CDS 33169 - 34728 523 ## EF2276 hypothetical protein - Prom 34949 - 35008 6.0 36 17 Tu 1 . - CDS 35224 - 35391 114 ## gi|227517081|ref|ZP_03947130.1| hypothetical protein HMPREF0348_0064 - Prom 35429 - 35488 8.0 + Prom 35536 - 35595 9.2 37 18 Tu 1 . + CDS 35624 - 36361 521 ## COG2188 Transcriptional regulators + Term 36396 - 36440 11.1 + Prom 36426 - 36485 11.5 38 19 Op 1 . + CDS 36526 - 37713 685 ## EF2272 glucuronyl hydrolase, putative 39 19 Op 2 13/0.000 + CDS 37731 - 38231 414 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 40 19 Op 3 13/0.000 + CDS 38261 - 39076 889 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 41 19 Op 4 . + CDS 39066 - 39881 665 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Prom 39924 - 39983 4.8 42 20 Op 1 . + CDS 40023 - 41951 828 ## EF2268 hypothetical protein 43 20 Op 2 . + CDS 41964 - 42380 549 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 44 20 Op 3 8/0.000 + CDS 42458 - 43105 683 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 45 20 Op 4 . + CDS 43108 - 44109 774 ## COG0524 Sugar kinases, ribokinase family 46 20 Op 5 9/0.000 + CDS 44136 - 44975 858 ## COG3717 5-keto 4-deoxyuronate isomerase 47 20 Op 6 . + CDS 44999 - 45802 891 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 45808 - 45859 2.0 + Prom 45812 - 45871 3.9 48 21 Tu 1 . + CDS 45897 - 46691 568 ## EF2262 hypothetical protein + Term 46806 - 46846 -0.5 - Term 47514 - 47574 12.4 49 22 Op 1 . - CDS 47599 - 48156 324 ## EF2260 hypothetical protein - Prom 48190 - 48249 11.9 50 22 Op 2 . - CDS 48402 - 49094 520 ## COG1737 Transcriptional regulators - Prom 49119 - 49178 8.3 + Prom 49078 - 49137 1.8 51 23 Op 1 . + CDS 49172 - 49750 562 ## EF2258 hypothetical protein 52 23 Op 2 . + CDS 49763 - 51064 777 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 53 23 Op 3 . + CDS 51143 - 51217 61 ## + Prom 51418 - 51477 7.5 54 24 Tu 1 . + CDS 51554 - 52663 701 ## COG0582 Integrase + Term 52693 - 52740 3.4 55 25 Op 1 . + CDS 53026 - 53694 714 ## EF2254 hypothetical protein + Term 53710 - 53744 5.4 56 25 Op 2 . + CDS 53751 - 54800 800 ## EF2253 hypothetical protein 57 25 Op 3 . + CDS 54805 - 55134 156 ## EF2252 hypothetical protein 58 25 Op 4 . + CDS 55137 - 56957 1110 ## COG4886 Leucine-rich repeat (LRR) protein 59 26 Tu 1 . + CDS 57766 - 58491 471 ## EF2248 hypothetical protein 60 27 Tu 1 . + CDS 59145 - 60224 540 ## EF2248 hypothetical protein + Prom 60978 - 61037 2.5 61 28 Tu 1 . + CDS 61060 - 61794 308 ## EF2247 transcriptional regulator 62 29 Op 1 . + CDS 62472 - 62933 257 ## EF2245 hypothetical protein 63 29 Op 2 . + CDS 62986 - 63393 140 ## EF2244 hypothetical protein 64 29 Op 3 . + CDS 63472 - 63663 218 ## EF2243 hypothetical protein + Prom 63741 - 63800 9.1 65 30 Tu 1 . + CDS 63830 - 63937 114 ## + Term 64063 - 64120 5.3 66 31 Op 1 . + CDS 64795 - 64947 61 ## EF2241 hypothetical protein 67 31 Op 2 . + CDS 64953 - 66101 608 ## COG0582 Integrase + Term 66291 - 66356 17.4 + Prom 66408 - 66467 9.8 68 32 Tu 1 . + CDS 66524 - 67357 745 ## EF2239 hypothetical protein + Term 67362 - 67405 6.3 - Term 67350 - 67393 2.5 69 33 Tu 1 . - CDS 67398 - 68459 971 ## COG1609 Transcriptional regulators - Prom 68479 - 68538 9.2 70 34 Op 1 . + CDS 68635 - 69021 261 ## EF2237 putative lipoprotein 71 34 Op 2 . + CDS 69002 - 70801 1664 ## COG4289 Uncharacterized protein conserved in bacteria 72 34 Op 3 . + CDS 70817 - 71959 1153 ## EF2235 glucuronyl hydrolase, putative 73 34 Op 4 35/0.000 + CDS 72009 - 73286 1625 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 73328 - 73377 -0.0 + Prom 73296 - 73355 7.1 74 34 Op 5 38/0.000 + CDS 73437 - 74339 694 ## COG1175 ABC-type sugar transport systems, permease components 75 34 Op 6 . + CDS 74351 - 75229 891 ## COG0395 ABC-type sugar transport system, permease component 76 34 Op 7 . + CDS 75242 - 75913 466 ## EF2231 hypothetical protein + Term 75925 - 75983 6.3 + Prom 75923 - 75982 4.0 77 35 Op 1 . + CDS 76014 - 76982 803 ## EF2230 hypothetical protein 78 35 Op 2 . + CDS 76993 - 80772 3799 ## EF2229 hypothetical protein + Term 80782 - 80848 12.7 + Prom 80846 - 80905 8.2 79 36 Tu 1 . + CDS 80934 - 81938 1353 ## COG0180 Tryptophanyl-tRNA synthetase + Term 81948 - 82000 13.3 - Term 81936 - 81988 9.5 80 37 Op 1 35/0.000 - CDS 81992 - 83770 207 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 81 37 Op 2 . - CDS 83823 - 85550 195 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Prom 85590 - 85649 4.2 + Prom 85470 - 85529 3.0 82 38 Tu 1 . + CDS 85665 - 86432 859 ## EF2225 MerR family transcriptional regulator + Term 86520 - 86560 -1.0 + Prom 86663 - 86722 5.7 83 39 Tu 1 . + CDS 86905 - 89425 2192 ## EF2224 cell wall surface anchor family protein Predicted protein(s) >gi|237663589|gb|GG668929.1| GENE 1 167 - 604 264 145 aa, chain - ## HITS:1 COG:L0470 KEGG:ns NR:ns ## COG: L0470 COG2801 # Protein_GI_number: 15672806 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Lactococcus lactis # 2 142 98 233 272 175 61.0 3e-44 MIRRRFKTSVPHQKITTDTTEFKYFEADNAGIFRQKKLYLDPFMDMYNSEILSYSLSTQP NGKTVMEGLKEAISQTNDCPYRRTFHSDQGWAYQMNVYIQTLKDNNIFQSMSRKGTCLDN SPMENFFSILKQEVYYGKIYQSQMN >gi|237663589|gb|GG668929.1| GENE 2 902 - 1018 72 38 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227553896|ref|ZP_03983943.1| ## NR: gi|227553896|ref|ZP_03983943.1| transposase [Enterococcus faecalis HH22] transposase [Enterococcus faecalis TX0860] transposase [Enterococcus faecalis HH22] transposase [Enterococcus faecalis TX0860] transposase [Enterococcus faecalis TX0309B] transposase [Enterococcus faecalis TX0309A] # 1 38 148 185 185 64 100.0 3e-09 MLKIENAYLKELRRLRLEDEQKMNESHESFTVSEDTFD >gi|237663589|gb|GG668929.1| GENE 3 1663 - 2034 456 123 aa, chain + ## HITS:1 COG:SA0890 KEGG:ns NR:ns ## COG: SA0890 COG2259 # Protein_GI_number: 15926624 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 7 117 4 115 118 73 41.0 1e-13 MDKQQRGIQVIRIWLGVTMLIHGVMKVTSLEDTLAFFASIGLPSLFVYGVAAIELIGGLF MIIGFLIPLVSVGFIAVLVGAIFSFGLASGFSGYEYELFLAITSLAILVSYADKKYLTLK LYF >gi|237663589|gb|GG668929.1| GENE 4 2305 - 4911 1614 868 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 859 1 808 815 626 43 1e-178 MNIEKMTTTLQEAIAEAQKVAVTRQHQEIDIAHLWKIFLQPNHFGRNFYTDAGLDVDAFE REVDNALDEYPSVAGGNVQYGQNLSQNLFHLLQEADSLREEFQDEFLSTEIVLLALMKLK NYRLTKYLMQQGITEKELRKNIEEMRGGDRVTSQNQEEQYKALEKYGVDLVQQVKAGKQD PIIGRDEEIRDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPENLKDKTIF SLDMGALIAGAKFRGEFEERLKAVLKEVKKSDGKIILFIDEIHNIVGAGKTEGSMDAGNL LKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVKEPTVEDTISILRGLKERFE IHHGVNIHDNALVAAATLSDRYITDRFLPDKAIDLVDEASATIRVEMNSMPTELDQVTRR LMQLEIEEAALKKESDDASKKRLANLQEELADLREEANSMKMQWETEKEEVNAVSNKRAE IDKAKHELEDAENNYDLERAAVLRHGTIPQLEHELKELEEKNAKDNVKMVQESVTENEIA QVVGRLTGIPVTKLVEGEREKLMKLNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRP LGSFLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPGYVGYE EGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNTVLIMT SNIGSQLLLEGVTPEGTIPEEVENQVMNILKGHFKPEFLNRIDDTILFTPLSLDNVKGII GKMTAQLAHRLEQQEIVLEITDEAKTWIAENGYEPAYGARPLKRFITREVETPLAKEIVS GRVMPKTKVTISLLDNQLVFENEPIEEV >gi|237663589|gb|GG668929.1| GENE 5 4946 - 5425 535 159 aa, chain - ## HITS:1 COG:MA3568 KEGG:ns NR:ns ## COG: MA3568 COG3613 # Protein_GI_number: 20092374 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside 2-deoxyribosyltransferase # Organism: Methanosarcina acetivorans str.C2A # 4 106 7 108 140 80 47.0 1e-15 MTKIYFAGPLFSQADLRYNAYLVEQIRQLDKTIDLYLPQENAAINDKSAYADSKMIALAD TENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDALNE IAENQFHYLNLYTVGLIKLNGRVVSSEEDLLEEIKQRLS >gi|237663589|gb|GG668929.1| GENE 6 5449 - 6669 1187 406 aa, chain - ## HITS:1 COG:BH1812 KEGG:ns NR:ns ## COG: BH1812 COG4552 # Protein_GI_number: 15614375 # Func_class: R General function prediction only # Function: Predicted acetyltransferase involved in intracellular survival and related acetyltransferases # Organism: Bacillus halodurans # 15 406 7 386 386 184 32.0 3e-46 MDEQEFRKQLTLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELS KVFGWFHENQLISQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEM RQDKQWISYLFPYNIPYYRRKGWEIMSDKLSFKIRDTQLPKTVPVPGMIERLAVDHPDVF DVYARFARQNHGALIRSAFNWEEYWRFENEEERTAAVYYGANQEPLGVLFYWVADEVFHI KEMFYLNQEARNGLWNFITAHFSMVYWVKGDIYKNEPLAFLLEDSQIKESIEPYYMARIV DVKAFLENFPFESTAKPFHFVVKDPVAEWNNGIFGLIWDENDQVTITDEPLGTAVHLDIQ TLTCLVMNYRRPSYLHRIERIDTDKETLNSLERIFPDQEAYFSDYF >gi|237663589|gb|GG668929.1| GENE 7 6916 - 8751 1925 611 aa, chain + ## HITS:1 COG:SPy1053 KEGG:ns NR:ns ## COG: SPy1053 COG0481 # Protein_GI_number: 15675045 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Streptococcus pyogenes M1 GAS # 1 606 1 606 610 1013 82.0 0 MNNKEMKARQEKIRNFSIIAHIDHGKSTLADRILEKTNTVSSREMQDQLLDSMDLERERG ITIKLNAIELNYTAKDGEIYTFHLIDTPGHVDFTYEVSRSLAACEGAVLVVDAAQGIEAQ TLANVYLALDNDLEILPVINKIDLPAADPERVRTEIEDVIGIDASEAVLASAKAGIGIED ILEQVVEYVPAPSGDIEAPLKALIFDSIYDSYRGVVLNIRVIDGVVRPGDKIQMMSNGKT FDVTEVGVFSPKPIARDYLMVGDVGYITASIKTVQDTRVGDTVTLADNPAAEALPGYRKM NPMVYCGLYPIDTSRYNDLREALEKLQLNDAALQFEPETSQALGFGFRCGFLGLLHMDVV QERLEREFNLELITTAPSVIYHVNKTDGTTVVVDNPAEFPEPVTIESVEEPYVKAQIMVP NDYVGAVMELSQRKRGEFITMDYLDDYRVNVVYEIPLSEIVFDFFDKLKSSTKGYASLDY EMAGYRTSRLVKMDILLNAEKVDALSFIVHRDFAFERGKAIVEKLKKLIPRQQFEVPVQA AIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKQIGSVEVPQEAFMA VLKMDDQDNAK >gi|237663589|gb|GG668929.1| GENE 8 8950 - 9879 531 309 aa, chain + ## HITS:1 COG:SP1130 KEGG:ns NR:ns ## COG: SP1130 COG1396 # Protein_GI_number: 15900996 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 152 221 3 70 282 62 44.0 1e-09 MQINKDELIKMGNHLKEARLSKQLTQEELARLSNISQATIVKYENGLRSISKKNDRILSD VLGAESFIKDMIQRKQQVLIDLEKYQTKNIFSREDLSKKLGIEISLLNKFLNQSRPLSKN AIVKITQLLSNEGKEILMDIKQEDGSFKLPIIDKIAMGKRIQEIRKNRGETLEKFGKNFT RPAGKNVVNRWEKGTNIPDIERLMNVAYLGKVAVPYILYGETFSKMLKKGSRISKFEKLD SFRMGLRLRKIRRDYRLEREDFGKFFSPPITKWSMDKYENGKDIPNTDRIIQYAYIGKVS LNFLIYGVN >gi|237663589|gb|GG668929.1| GENE 9 9925 - 10008 65 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLNCGKITVNSNFGGNYYDNFKGKSS >gi|237663589|gb|GG668929.1| GENE 10 9980 - 11359 516 459 aa, chain + ## HITS:1 COG:no KEGG:EF2349 NR:ns ## KEGG: EF2349 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 459 1 459 459 855 100.0 0 MTISKVKALRAVLSEKRTTFLFGAGASVPFFSSLGKIEEYMTSKDITEEGKRLVMFAFYY IAIKDNSILVEYIKKGESENHLDSGSSVMNQYSRFIFNCVEFLKLRNSRVSPRRTNIFTT NYDLFLEIAVEKNIESNPKIFFNDGTNGYMKRYLSTENFNKTMLYAGAFDNYANELPTIN LVKCHGSVNWLNEQNFIGRDRVLVDNSLLDTIKTAEKAEEVWSELQNDIVHDTNFQRSFT IEILKDVILGKPVDGFIDSPTEVINYFGKKYYNQLQGISEKISEIQIVLPTKRKFQSTLI EEQYFNMLRFLSYELEKEQSVLIAFGFSFLDEHITDIVQRSLNNPNLLVFIFCYKDGTKG EIINQFSFGANAVPSNIVFITPSDFIMEQAENEEETPLPLETNQIRSNDSTIVTYSEEVS VYDNKDAVIDFEAFNRIIEGNLSEKYIDSQYTEVVDDDE >gi|237663589|gb|GG668929.1| GENE 11 11349 - 11867 307 172 aa, chain + ## HITS:1 COG:no KEGG:EF2348 NR:ns ## KEGG: EF2348 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 172 2 173 610 327 100.0 2e-88 MTNNSNIEVALVVEVNGIRCKAITFDDMNQATYINNGEVIKNLSVNSFVVIRQNFIKIIG RINSESIWDTQNNKQNYQLDNRFSKNTIKRILDIQIIGYISEGCFTTGTTYIPMIGNICS IPTTEETQTIYVNSFDHFNGDQTIKIGKSLNEQIEVNLPISSFFASHIGIFG >gi|237663589|gb|GG668929.1| GENE 12 12334 - 13257 323 307 aa, chain + ## HITS:1 COG:PAE2903 KEGG:ns NR:ns ## COG: PAE2903 COG0433 # Protein_GI_number: 18313675 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Pyrobaculum aerophilum # 129 304 346 520 608 74 25.0 3e-13 MDLKNRFVSILGEFYDSSEALEPIKQAQIYSKDDPAKFIVNGTFFDGNWESKHMQAVNLE QVENVILTEKLNIFKEFELRCKLQLVKDLLYRNVISDHIDPLLKRIDSRIEDFQKYIEIV GQIDNVKFLEIISLRDLNQEAKQIVAMLTSKMFFDEQKTSKDKVSFHLIIDEAHNILSDQ SRNDNTSWKDYRLSTFEEIIKEGRKFGFFLTLSSQRPADISPTLLSQVHNFFLHKLVNER DLQIIDNSLSTLDRVSKSMLPGLSQGICIITGTALSLPMIVNVDFISDKTLRPQSDTVDL VEAWVNE >gi|237663589|gb|GG668929.1| GENE 13 13272 - 13448 124 58 aa, chain + ## HITS:1 COG:no KEGG:EF2350 NR:ns ## KEGG: EF2350 # Name: not_defined # Def: Cro/CI family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 20 58 270 308 309 63 76.0 2e-09 MRPSKIEGLFLCSKRKAGFMNKCKMDKYEDGKDIPNTARIIQYAHIGKVSLEFLIYGI >gi|237663589|gb|GG668929.1| GENE 14 13540 - 15819 1915 759 aa, chain + ## HITS:1 COG:lin2282 KEGG:ns NR:ns ## COG: lin2282 COG4932 # Protein_GI_number: 16801346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Listeria innocua # 271 731 1195 1602 1806 78 25.0 6e-14 MKKTTFKNWPLFATLALLSQTIGGTIGPTIAFADEITHPQEVTIHYDVSKLYEVDGTFSD GSTLSERTTSLYAEYNGAKQTVFCIEPGVSIPTEVTHGYQKNPLPSMSDKAKLVSVLWEK AGTDIDTNMVAQKMIWEEVNGYKLHSIKRLGGASVDIKSIEGKINKAIEEYQKKPSFHNT TVKTILGQSTTLIDKNELNLSEFDKVVQNTANIDYRVIGNQLVLTPNSNSKSGTLTLKKS AGTGTPVAYKKAGLQTVMAGALDKPNTYAIKIDVETKGSLKIKKIDKESGDIVPETVFHL DFGKALPSKDVTTDKDGISILDGIPHGTKVTITEKSVPDPYMIDTTPMAATIKAGETISM TSKNMRQKGQILLEKTGVETGTDLWNDNYSLAGNTFAIRKDSPAGEIVQEITTDEKGRAE TPKELANALELGTYYVTETKSSNGFVNTFKPTKVELKYANQTVALVTSNVKGQNQEITGE TTLTKEDKDTGNESQGKAEFKGAEYTLFTAKDGQAVKWSEAFKTELVKGTKASDETVTLA LDEKNQVAVKHLAINEYFWQETKAPEGYTLDETKYPVSIKKVDNNEKNAVITRDVTAKEQ VIRFGFDFFKFAGSADGTAETGFNDLSFKVSPLEGTNEITGAEDKATTACNEQLGFDGYG KFENLPYGDYLLEEIEAPEGFQKITPLEIRSTFKENKDDYAKSEYVFTITEEGQKQPIKM VTVPYEKLTNNEFSVSLNRLMLYDLPEKEDSLTSLALAS >gi|237663589|gb|GG668929.1| GENE 15 15979 - 16764 561 261 aa, chain + ## HITS:1 COG:no KEGG:EF2347 NR:ns ## KEGG: EF2347 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 261 814 1074 1074 484 99.0 1e-135 MIAETTATLANKEKTGTWKILHKLTAEQVLDKSIVLFNYVYENKVAFEAGNEPVAKDASL NNQAQTVNCTIERHVSIQTKAHLEDGSQTFTHGDVMDMFDDVSVTHDVLDGSKEAFETIL YALLPDGTNKEIWKSGKIEHEVNDKEFTKTVLAEKVDTGKYPEGTKFTFTEINYEKDGNV NGKHNEDLKEKSQTLTPKEVPTIPSTPKQPETPAVPSNSQESSPTVKTFPQTGEKNSNVL LLVGFILIFSTAGYYFWNRRN >gi|237663589|gb|GG668929.1| GENE 16 16877 - 17191 504 104 aa, chain + ## HITS:1 COG:no KEGG:EF2346 NR:ns ## KEGG: EF2346 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 104 1 104 104 196 100.0 2e-49 MELKFVVPDMAETFGKLGYAGEGEILTEGYGRNTVVIGRSYHLYSSKQRADDIEVVVAAE AGEKDFDQDQPLKAVNPHLVAKGYAIENRGFTDYVLYVDDLVKA >gi|237663589|gb|GG668929.1| GENE 17 17204 - 17575 475 123 aa, chain + ## HITS:1 COG:no KEGG:EF2345 NR:ns ## KEGG: EF2345 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 123 1 123 123 228 100.0 7e-59 MRLTEGIVVDSGLTFGKLRFSALRREVRKQNEDGTVSNEVKERTYNLKSSAQGRMIQVSI PANVPLREFAYDTEVELVNPIVDTVANYAFREGTTVNWFIKADDLVLKRQSNQGNTHQNE GKK >gi|237663589|gb|GG668929.1| GENE 18 17585 - 17929 347 114 aa, chain + ## HITS:1 COG:no KEGG:EF2344 NR:ns ## KEGG: EF2344 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 114 4 117 117 194 100.0 7e-49 MEIDVEHIFDCLDRYGKGELTEKQLTKGVTDDEKMFLIMHQGLLGGNTDSEEEFNVLDWL GEEESFFMIVEINENLCRKAESILEEIGVEMPDVIESFLKQLVETKQLPVVVND >gi|237663589|gb|GG668929.1| GENE 19 17997 - 19343 775 448 aa, chain + ## HITS:1 COG:BS_ydcQ KEGG:ns NR:ns ## COG: BS_ydcQ COG1674 # Protein_GI_number: 16077553 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Bacillus subtilis # 2 439 12 446 480 407 47.0 1e-113 MYKGHRIRARNQHLIYHFVLGWLLALFIGCMSVFYFQELRQFEISKLSFSTSEIDWSTKD LICLLGSFALSGGMILLYIHFFQDHWRSLWHRQKLARMILENHWYEVKQTQSEGFFKDLN GSRTKESISYFPKIYYRMKDGLLSIRVQISLGKYQDQLLKLEKKLESGLYCELVEKELKD SYVDYTLLYDMIANRIGIEEAVVENGALRLMKNQVWAYDFLPHMLIAGGTGGGKTYFLLT IIEALLKSDAELFILDPKNADLADLGTIMTHVYSQKEQISACVEDFYERMMVRSRLMKEM PNYKTGENYAYLGLSPNFLVFDEYVAYMEMLTTKESAVILNKLKQIVMLGRQSGFFLILA CQRPDAKYLGDGIRDQFNFRVALGRMSELGYSMMFGEVDKIFFMKQIKGRGYVDTGGGVV SEFYTPLVPKGYDFLESTKTIVQNNINI >gi|237663589|gb|GG668929.1| GENE 20 19449 - 19907 320 152 aa, chain + ## HITS:1 COG:no KEGG:EF2342 NR:ns ## KEGG: EF2342 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 152 1 152 152 295 100.0 3e-79 MTADTTFNISIPSDSDGFIFLQCTLCGEYFKLTPKDLEDESQLHVWCPKCGLTPDSLFTD EVIELAMKIVNNHVSDLLNDFGKNLSKSSKNGSVKFKSGSKIKKDPVDPIISKLDNLELQ IYDCCHKEAKISPSLKMEGGYCPFCGEMQDGD >gi|237663589|gb|GG668929.1| GENE 21 19897 - 20718 690 273 aa, chain + ## HITS:1 COG:no KEGG:EF2341 NR:ns ## KEGG: EF2341 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 273 1 273 273 482 100.0 1e-135 MEININKKDLKKASRKFRQLASRVLNAHYSEVNSIIKMFVEYIDSTPVIYEYIQDVFVEY PNLEDEIKQVSESYGRLILTTGKTPEQEVSSVYQILKYISENLSTNTTFLGWGYTSSRAY QDMVKEFGNRVVMPFVDQVNVYLSDIATDMGYDEERKYMIHVSGGQAQVNISNDNSTINA NQNVQINQSKVDDLISDLKSNIEKELVDNEPIKDVLLSQLALIESQQTESEPQKNVLKTA FETMQSLLKTAPLAVTAVESCNRLYELMSPLFN >gi|237663589|gb|GG668929.1| GENE 22 20799 - 21941 468 380 aa, chain + ## HITS:1 COG:SP1336 KEGG:ns NR:ns ## COG: SP1336 COG0270 # Protein_GI_number: 15901190 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Streptococcus pneumoniae TIGR4 # 4 337 5 407 407 345 48.0 9e-95 MTFLDLFAGIGGFRLGMEQAGHHCIGFCEIDDFARRSYKAIYDTSEEVEMYDITSVSDEF IQSLGPVDILCGGFPCQAFSIAGKRQGFSDTRGTLFFEIARFAALLQPKFLFLENVRGLL NHEGGATFETILRTLDGLGYDVEWQVLNSKAYVPQSRERVFLIGHSRDICTEQVFPIIES SATSDQNLRNLLNTNPSNRGMSEQVYGSDEFAPTVTGDEGIKIALPVNDGISVVGMLPGN FEQGNRIYEVTGTAPTLSTKQGGTKIMIRKNKIEYQEVKPEGSVNLAFPHSKSRRGRLEK QSVHTLLTGDQQAVITDQYQIRKLTPRECWRLQGFPDWTFDRASQVNSDSQLYKQAGNSV TVPVIFDIAKRLKEVKTDDL >gi|237663589|gb|GG668929.1| GENE 23 21967 - 22200 330 77 aa, chain + ## HITS:1 COG:no KEGG:EF2339 NR:ns ## KEGG: EF2339 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 74 1 74 84 127 100.0 1e-28 MIGKIHSDPELKEELRQLNFDIRKNVVKVTGDSYVMDEGTDTRIELNQVIKELERIAYLA KESDIRQYLFEIKALAS >gi|237663589|gb|GG668929.1| GENE 24 22649 - 23833 716 394 aa, chain + ## HITS:1 COG:BS_ydcR KEGG:ns NR:ns ## COG: BS_ydcR COG2946 # Protein_GI_number: 16077554 # Func_class: L Replication, recombination and repair # Function: Putative phage replication protein RstA # Organism: Bacillus subtilis # 66 394 27 352 352 254 42.0 3e-67 MAQRNLDYRLLKDRRNEYGVSQNKLAIACGLSRTYLNLIENGGVTASTKTMRKIFDQLES FNPDLPLTLLFDYVRIRFSTTDVRKIIQELLHLKFEYMLHEDYAFYSYQEQYVMGDIVVM LSHEEDKGVLLELKGRGCRQFETFLLAQKRSWYDFFEDCLKTGGVMKRLDLAINDRVGLL DISDLTKKCQKEECISLFRTFKSYRSGELLKADEKDGMGNTLYIGSLKSEVYFCLYEKDY EQYIKLGIPLDQTETKNRFEIRLKNDRAYHAIQDLLKGRSIESTTFSIINRYLRFADKVE GKRRTNWPLNEQWGRFIGRNRKEIQLTSEPKPYTIERTLNWLGRQVAPTWKMAKELDRLN QTTYIQDMVRNARLSDQHKKILEQQSMAIENLIV >gi|237663589|gb|GG668929.1| GENE 25 23848 - 23967 170 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGIVKDILLVFGGSMLGVTVMCLMHASTAADRVMEKKGK >gi|237663589|gb|GG668929.1| GENE 26 23972 - 24193 335 73 aa, chain + ## HITS:1 COG:no KEGG:EF1883 NR:ns ## KEGG: EF1883 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 73 1 73 73 102 100.0 7e-21 MNFGQNLYQWFLTNAQSLVLLAIVVIGLFLGFKREFSKLIGFLVIALIAVGLVFNASGVK DVLLNLFNRIVGA >gi|237663589|gb|GG668929.1| GENE 27 24206 - 24706 492 166 aa, chain + ## HITS:1 COG:no KEGG:EF2335 NR:ns ## KEGG: EF2335 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 166 1 166 166 301 100.0 7e-81 MEQMRVYIANLGKYNEGELVGAWFTPPVDFDEVKERIGLNDDYEEYAIHDYELPFEIDEY TSIEEINRLCGLAEELEGTPIGEVASEIQHAFFNSFEEMVEHVDDIVYYPDCNDMEDLAY QMVNEGYLGDAPENFVRYFNYSSFARDLEIEGNYLVTNRGIFEYPI >gi|237663589|gb|GG668929.1| GENE 28 24739 - 25311 382 190 aa, chain - ## HITS:1 COG:no KEGG:lin1083 NR:ns ## KEGG: lin1083 # Name: not_defined # Def: hypothetical protein # Organism: L.innocua # Pathway: not_defined # 30 181 60 214 216 84 32.0 3e-15 MDYRTKEKKLKQLLNFIYDGITVTSDLLELSQQEFASLLESATKSGYIRGASITKTKMYP IIWTDDVELTEEGAEKIHPSEKNSQSIQTTNTFNFNSSGDYRGATFGNNNTVTNNWNNSL DELKEYIDALPPEEQQVGKELINIVETKDFKPNVLERFSDFLEKHPKIVTLAGNAIVWAL SNTDKLPLIN >gi|237663589|gb|GG668929.1| GENE 29 25327 - 25941 499 204 aa, chain - ## HITS:1 COG:no KEGG:EF2282 NR:ns ## KEGG: EF2282 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 204 1 204 204 341 100.0 1e-92 MKQEELNLKLYELLLKIQNESDTLTNADISESDADFYGYLISKELVYNLKIEHYYSGPNI DASQAIITDKGYAFINQIGEADKPIKMNRENRYKQLQIFLKRLDDHDADLRTPNYRVQEI DYYDLIKYAIDSNLVKGIAIRYASNKPHLFLSQFARVTTEGYDVLDTPYPKNNTPGATIS NTYNIYGGDQKGASFGSNNTTNNN >gi|237663589|gb|GG668929.1| GENE 30 26018 - 26407 170 129 aa, chain + ## HITS:1 COG:no KEGG:EF2281 NR:ns ## KEGG: EF2281 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 129 1 129 129 233 100.0 2e-60 MKKIKSYTSIWAVEKVIYAINDFQLPFPVTFNQMAWFVLSLLFVIVFAHVPPLSVIEGAF LKYFGIPVAITWFMSQKTFDGKKPLGFLRSFISYHLRFKVTFAGKKVKEQKKRWDEPITL VRSVNYVPD >gi|237663589|gb|GG668929.1| GENE 31 26394 - 26738 381 114 aa, chain + ## HITS:1 COG:no KEGG:EF2280 NR:ns ## KEGG: EF2280 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 114 1 114 815 226 100.0 2e-58 MYPIKYIENNLVFNQEGECFAYYELIPYNYSFLSPEQKYQLHDNFRQLIAQNREGKIHAL QIATESSIRATQERSKKEVIGRLKEIALQRIDLQTDALVSMIGDSQIDYRFFIG >gi|237663589|gb|GG668929.1| GENE 32 28847 - 30961 1102 704 aa, chain + ## HITS:1 COG:no KEGG:EF2279 NR:ns ## KEGG: EF2279 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 704 1 704 704 1315 100.0 0 MKRKILRIVGIVLTSLFFLIILLSLVGKVAEATGLVDDTVKAGNLYSQYSLGNYQLDFFV DNSWDWLPWNWGDGLGKSVMYGLYAITNFIWTVSLYLSNATGYVVQEAYKLDFISDTAES IGKNIQTLAGINENGLQPSGFYFGFLMLMILVLGIYVVYTGLLKRETTKAVRAVINFVAI FLLSGSFIAYAPNYITKINDFSSDISESALSLGTKIVVPNSESHGKDSVDLIRDSLFSIQ VQQPWLLLQFDDSNVEEIGEERVNKILSVSPDENKGKDREEAVKAEIEDNENANLSITKT MSRLGTVVFLVLFNIGISFFVFLLTGIMLFSQILFIIFAMFLPISFLLSMLPTYESLGKK AIVRLFNTIMMRAGVTLVITTAFSISTMFFNISATYPFFMVAFLQIVTFAGIYFKLGDIM SMFNLQSNDSQSMSRRVMRKPQMLMNRKFRQLNRNVGRALAFDGGVAVAGKLATDSTKEN RGSKSKRLSNRRNQSIQSNHEQNTDPKKQEKTTNSRTTRLNLMGRKAGKAMDSKSIVKDK VKQAKDHVIDTPTNLKYNLHRGIEKAKNAPGEFKRGLVQEKKEREEQRKANHQQRQKRMD EKRQVLGNRRTSFLKRRTNVSANTFPNSKDHSSLSQRQVAKDFHNVSVLQNRQKDSLQTI YPKIAPKMMSIKKMKNQSTLTKNGKKQYQKNSINREKVKTGDMA >gi|237663589|gb|GG668929.1| GENE 33 30958 - 31980 845 340 aa, chain + ## HITS:1 COG:BS_yddH_2 KEGG:ns NR:ns ## COG: BS_yddH_2 COG0791 # Protein_GI_number: 16077564 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Bacillus subtilis # 215 334 5 124 124 126 49.0 6e-29 MTIKKLSTVLLVLLTVLFMGILICVGLLFGDDSEGNSSTGLSSGGSNVSLEVLKHRPLVE KYAKESDILEYVPILLAIIQVESGGTMEDVMQSSESAGFPPNSLSTEASIKQGCIYFASL VNRAKDIGCDQESIIQSYNYGGGYLDYVGKNGKKYSFALAESFSKEKSDGEKVTYSNPIA IKENGGWRYNYGNMFYVMLVKQYLTTTKFDDKTVQGIFDEAFKYEGTAYVFGGSSPATGF DCSGLTQWCYAKVGLQLPRVAQDQYDAMSHIELKDAKPGDLIFFHSTYDAGTYVTHVGIY AGDNRMFHAGDPVGWTNLTETYWQQHIIGAGRYKNRKGDR >gi|237663589|gb|GG668929.1| GENE 34 31980 - 32888 556 302 aa, chain + ## HITS:1 COG:no KEGG:EF2277 NR:ns ## KEGG: EF2277 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 302 1 302 302 451 100.0 1e-125 MKIKIERNKKKISGKKKEQVVSMGKHRKMVLVLWLLLLSSLSFGIYKNFTAIDQHTTHEK VVVKEKIVNTSGVENFTVDFAKEYFSWKNDRVAIEKRIRSLGHYLTKDVLDLSQDMVRAD IPTSSKVNSVKILNVEKKSKWFVVSFLVDQEIVEEKKALQEKTAYRISVFEDRLGNCIVT SLPTMISKPVKANYKTKQFTDDSMIKEKNKEEIEEFLEVLFKLYPTASKEELGYYVKKDV LEPIYKNLKFVEISSINYQKKGQAIKTNILVKYLDPTSKITSKFQYVLILQKAKKWEVIA NE >gi|237663589|gb|GG668929.1| GENE 35 33169 - 34728 523 519 aa, chain - ## HITS:1 COG:no KEGG:EF2276 NR:ns ## KEGG: EF2276 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 519 65 583 583 884 100.0 0 MTFIQQSKAFLAGLLLFLIAVKFYSFVSQYYAKRTSEKNEFSFFADLLNSYGNEQEYQAN LNKLAKLTQQLYFQAYLSSSSKNKITPKTRIAFNYAFLSQRALYFFTSIDKLVKPDSIIE KWMTRISDFFEKSSQFTTMSVIEKNELRIQGKILITSLEHSDEVALILLRNLLIHSLFIL RLLDNDPEISNNHWSTPLHHQTKYLFQHKFRIDSFELRVALRFSIVLAFCFSLCTLTHIT RGTWLPMNAFLLLQPMNEETTYRLKTRFLGTIFGCLISIYTVQLFSNNLLHLILASLLGI CAFTIIPGTTFQATLSTIFALFLSSLVMSNLMAAGLRFVYVLLACSLVFLVNQFILPTGI KNQFRFNLQELFHIHQTSLIFLQNSFHHKIDYGTIADLQMNYHLLHGEIKNYFGKSDKLK QISYKEFLSISWQMITIVEQLLLLIDSKKITENDITVIENTIDSLCYVLSLIQNLLDCNL KTLKIPEVLFKRDLAIDPEIAYLLFQYSKKLSAMYRLVL >gi|237663589|gb|GG668929.1| GENE 36 35224 - 35391 114 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227517081|ref|ZP_03947130.1| ## NR: gi|227517081|ref|ZP_03947130.1| hypothetical protein HMPREF0348_0064 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_2398 [Enterococcus faecalis HH22] hypothetical protein HMPREF0348_0064 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_2398 [Enterococcus faecalis HH22] hypothetical protein HMPREF9507_03051 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9506_02004 [Enterococcus faecalis TX0309A] # 1 55 5 59 59 92 100.0 8e-18 MTIKKQPPTKIYATFYELKEDNFIRLTNIYKQKGYSPTFIFVYHKQNNLFIDSLD >gi|237663589|gb|GG668929.1| GENE 37 35624 - 36361 521 245 aa, chain + ## HITS:1 COG:lin0019 KEGG:ns NR:ns ## COG: lin0019 COG2188 # Protein_GI_number: 16799098 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 3 242 4 241 246 119 35.0 4e-27 MLPKYEIIKRDIIEKIESGEFSTGEKVYSEGDLKRKYNVSNTTVVKALNDLVNEGYLIRR QGEGTFVRKNLKHRKVFFSEKLSMSNNEKQKSVEETITLVSEEFTDKEIAQILGDKSGSK ALLKLTQIALTNDFPWKIQNRYLFADKLRDDSVKRLIEGASLSDELGLQGNMANLPMTME VSTILLTKDSDELEPLRIIRKSFGEEDSFSLFNIKRLIRGNDGVPIEYSQSFILSDFYQI EIISE >gi|237663589|gb|GG668929.1| GENE 38 36526 - 37713 685 395 aa, chain + ## HITS:1 COG:no KEGG:EF2272 NR:ns ## KEGG: EF2272 # Name: not_defined # Def: glucuronyl hydrolase, putative # Organism: E.faecalis # Pathway: not_defined # 1 395 1 395 395 775 100.0 0 MKKITQEKLLSSERFFGQGILTEDFIDQSIDKVLKKVEKNIQKLGDKFPTPATTDNTYIA MDNTEWTNGFWTGILWLCYEVSGEKHYREVAEQNVKSFIYRIENEIEVEHHDLGFLYSLS CVSAYKLTGNEAAKNAAISAAEKLLQRYQSKGEFIQAWGELGNQDNYRLIVDCLLNIPLL FWASTVTQDKRYREVAVKHYHTTIDNAIREDSSAYHTFFFDAETGDPLYGKTRQGYSDSS SWARGQSWLIYGLALFRSYCPEEENTEIFEAITNYFLNRLPKDFVSYWDLIFMDGSEQSR DTSATAIAVCGMSLMDAFLPETNSHKLVYKCAQHSMLRSLSENYTESKTDGITALLNEGV YSWHSGKGVNEGNIWGDYFYLEALVRFKKNWKMYW >gi|237663589|gb|GG668929.1| GENE 39 37731 - 38231 414 166 aa, chain + ## HITS:1 COG:SP0323 KEGG:ns NR:ns ## COG: SP0323 COG3444 # Protein_GI_number: 15900255 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 1 160 1 160 163 172 51.0 3e-43 MQKPNVKMVRVDERLIHGQGQLWIKSLGVNLVICANDKAAEDSLQQTLMKTVVPKETNIR FWTIERTAKVIWKAAPSQTIFVVVGNLHDALELCKLGFPMEQLNIGNIHADEGKEKISQF IYLGKEDKQALCLMRDNYGVTFNTKTSPLSNDGSQYLDVLMEKISN >gi|237663589|gb|GG668929.1| GENE 40 38261 - 39076 889 271 aa, chain + ## HITS:1 COG:SP0324 KEGG:ns NR:ns ## COG: SP0324 COG3715 # Protein_GI_number: 15900256 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Streptococcus pneumoniae TIGR4 # 1 246 1 245 259 248 56.0 7e-66 MEISLVQGILIGLITAFCYSGQLLGIYTNRALVMSFFVGVVLGDIPTALTFGALAELAYM GFGVGAGGTVPPNPVGPGIVGTIMAITLKHQGVTPESALALSFPFAVLFQLVTTAIYTIF SGNVKWSKNVIEQGKYTRFNLIANSTYIAFAVAGFMIGLLAALSRPGLQAFVEALPNWLI NGFSVAGGLIPAIGFAMIMSVMLEKSLTPYVLLGYICAAYLELPTMAVAMVGTVFALIQY YGKDKTIVGEKSIRDESQTTLMEEEDFSNGI >gi|237663589|gb|GG668929.1| GENE 41 39066 - 39881 665 271 aa, chain + ## HITS:1 COG:SP0325 KEGG:ns NR:ns ## COG: SP0325 COG3716 # Protein_GI_number: 15900257 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Streptococcus pneumoniae TIGR4 # 7 271 6 272 272 253 50.0 2e-67 MESRTPKLSQKDYMKTALRSYLLQNAFNYTSYQGVSYLYTIMPALKKIYKDEPEKLKETA SANLEFYNTNPQMLPFITSMQLAMYDNGQSVTDTRSIKMALMGPLSGIGDSIAQFGIAPL FSTIFAGLAMDGLGFAPMGFWFSMLISMLIIKLLMGYLGFKLGTSVIETLSDKIGKISSA ANIVGVTVIAALATSFVKANIAIKYSHHVESGEKQVIAIQDILDKIMPKMLPVILTILVF YLIKKRNWNTYKLLILLFAIGIAASVLGILA >gi|237663589|gb|GG668929.1| GENE 42 40023 - 41951 828 642 aa, chain + ## HITS:1 COG:no KEGG:EF2268 NR:ns ## KEGG: EF2268 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 642 1 642 642 1307 100.0 0 MNLQRIEDYQLKFFQQDWLSEYLEQQSQFLKPLFERTSYLLKDQIIYNDAMDMEACSIPY SLKEYAWNRYPDDDPEWLFMLSRQSFLVDLAQAYALTKKERYLQKWHSLLIDFINDEGEP NSTNRDVWRPLDVGIRVTNWMKSLTYIPIADFRLLGIDDVLNNALLIHLDYLERSYIDKY RLSNWGVLAIGGMAAIDLFLPELVTSKQRDLIWSRLAEQLDLQFYSDGIHWEQSPLYQHE VLMTFVYLLQISEYLEVQLPLDLRMKLKTPIFSTHYLADNQDILNPINDSDHVNFHYVYD IYRKLGFIFEPSMTANMARLWTGDLYEERIWETMKPKELFRGESSGLMAYKAEDIYFTLF NGLHGSAHGHASTGGFTLQLQGDDLFSDSGRYSYVNKSERLQLKECASHNTMFIAENPHT LVSDTWGYDKLPTPLFQQIKELSVGFFAECGWLDKADQNPMIFERSFIYLKSINSVVIID SFAGQKETEITSTYNLAPSINCQKEAHRFALTTNKHKYTLLFAGGQTQQSVAKGSEIYNQ LNEHPRLSNKFCYKTGKEIQATVISPLEDIQITPIKVSQTGENEQFCQAKGFRIIAGSEK FDLFVMREDIVKGNKLLVSEYGQFFYGRLVLIDQKEAKIRIK >gi|237663589|gb|GG668929.1| GENE 43 41964 - 42380 549 138 aa, chain + ## HITS:1 COG:SP0321 KEGG:ns NR:ns ## COG: SP0321 COG2893 # Protein_GI_number: 15900253 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 1 116 1 118 144 65 34.0 2e-11 MKLLITGHSEFSIGMQSALAMIAGELEDVIIIPFLAEETVDEYRQKVAAEIQMFDQAICF TDLLGGTPFKTCVEFSEEKDQVFVVSGTNLGMLLEGLMMRNSVTDSFEIAETVVQAGKSN IMLFEKNNETEELPEEGI >gi|237663589|gb|GG668929.1| GENE 44 42458 - 43105 683 215 aa, chain + ## HITS:1 COG:SP0317 KEGG:ns NR:ns ## COG: SP0317 COG0800 # Protein_GI_number: 15900249 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Streptococcus pneumoniae TIGR4 # 1 206 1 206 209 216 49.0 3e-56 MKKVEVLKRLENAGVIAVLRADSKEEALKISHAVVEGGMIGLELTFTVPQADEVIRSLVE TYHDEKDIVIGAGTVLDAVTARLAIMAGAEFIVSPSFNRETAEICNLYQVPYLPGCMTIT EMQTALKSGVDIVKLFPGSTYGPSIISAFQAPLPYLNIMPTGGVSLDNMASWFEAGVTAV GVGGNLLAHAKTGEFGKVTALAKQYMAKFREIKEN >gi|237663589|gb|GG668929.1| GENE 45 43108 - 44109 774 333 aa, chain + ## HITS:1 COG:CAC2684 KEGG:ns NR:ns ## COG: CAC2684 COG0524 # Protein_GI_number: 15895942 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Clostridium acetobutylicum # 1 333 1 329 329 223 38.0 4e-58 MANILTLGEIMLRLSTDIGVRLNETQQLICHYGGGEANVAISLANFGHQVSFASKVPDNS LGQAAVKHLRRNGVMSDFVQLGGARLGTYYMETGIGERAASVTYDRAGSSFAEVTEFPWS YEKLFSGIELFHISGITAALSVQWCQWTVELVKAAKKFGVLVSFDINYRGKLWSQAAAGK ALKEILPYVDYCSAGELDARYLLEIPEDRMNSGFVYYYQQMQQQFPNIKCFYSTKRIVSS ASNNQLVGTLWLENTYYESEVHKINPIVDRVGGGDAFAAGILHGLISDFDGQRTVEFATA ASALKHTVHGDCNQFSEIEIEQFLTAGSGRIVR >gi|237663589|gb|GG668929.1| GENE 46 44136 - 44975 858 279 aa, chain + ## HITS:1 COG:YPO1725 KEGG:ns NR:ns ## COG: YPO1725 COG3717 # Protein_GI_number: 16121985 # Func_class: G Carbohydrate transport and metabolism # Function: 5-keto 4-deoxyuronate isomerase # Organism: Yersinia pestis # 4 279 1 278 278 323 54.0 2e-88 MQNMDTRYTHSPKDISHYSTEELRKEFLVEKVFVPNEVSLTYTHNDRMIFGGVTPTTESL EIILNKELGVDYFLERRELGVINIGGPGFIEIDGRKEAMKKQDGYYVGKETRQVIFSSED AADPAKFYISSAPAHHKYPNVKISIDEIKPMETGEALTLNERKIYQYIHPNICESCQLQM GYTILEPGSSWNTMPCHTHERRMEAYVYFDMEEDTKIFHMMGDPAETKHLVMGNEQAVIS PSWSIHSGVGTSNYSFIWAMCGENITYTDMDMVPMDELK >gi|237663589|gb|GG668929.1| GENE 47 44999 - 45802 891 267 aa, chain + ## HITS:1 COG:SP0320 KEGG:ns NR:ns ## COG: SP0320 COG1028 # Protein_GI_number: 15900252 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Streptococcus pneumoniae TIGR4 # 3 267 6 270 271 417 77.0 1e-116 MDFNMDMFRLDGKVALITGAVYGIGFEIAKSLAAAGATIVFNNLTQESVDEGSANYKAEG IEAKGYVCDVTDEKAVQAMVKQIKEEVGSIDILVNNAGIIKRIPMTDMSATDFRQVIDVD LNAPFIMSKAVIPEMIEKGGGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYG QFNIQCNGIGPGYIATPQTAPLRELQENGERHPFDQFIVGRTPAARWGDPVDLAGPSVFL ASQASDFVNGHVLYVDGGILAYIGKQP >gi|237663589|gb|GG668929.1| GENE 48 45897 - 46691 568 264 aa, chain + ## HITS:1 COG:no KEGG:EF2262 NR:ns ## KEGG: EF2262 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 264 1 264 264 516 100.0 1e-145 MQIELSIINQENEVVMCSSGVDEAVLATKKYAFQAGDKFKVVTAEKQLVYVQLDNALGSS LVYLSKGEWVYEIPTTEKLREAYPPAAFLDEKHYFFVRKAFAEEQTSYRNWALNPHDQKD VANVYPHAYANVETRNDATFFARNAIDGILANRDHGSYPYQSWGINQQKDAEITIDFGRE VELDKLGLVLRADFPHDSYWKQVTIAFSDGSEEIFTTSDAIATQYFTFSPRTVTTATLKQ LIKAEDESPFPALTQIELFGYQKL >gi|237663589|gb|GG668929.1| GENE 49 47599 - 48156 324 185 aa, chain - ## HITS:1 COG:no KEGG:EF2260 NR:ns ## KEGG: EF2260 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 185 1 185 185 291 100.0 7e-78 MNDLEQLVSYLEGNFSNEQQFSELTETEQSEFPFAIHKSHIFNDRVLNLPENFKGIFLLE ESYYTLNGKERFKSDIFLFEVNSSSNVKLSSITVPKNYANKKYEEIESIPFSEMTISEKF VPIVYKKENETFIGQSESKFTEKNHFILKQTISEKKLIIKEEIMRGNKRIFGFDKPIEYV RVKEN >gi|237663589|gb|GG668929.1| GENE 50 48402 - 49094 520 230 aa, chain - ## HITS:1 COG:CAC3424 KEGG:ns NR:ns ## COG: CAC3424 COG1737 # Protein_GI_number: 15896665 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 12 226 7 227 235 79 27.0 6e-15 MDTEMLIDKYQLNDSEAAVLRFMDKNRDCLKSLGIREVAKASYVSTTAIINMAKKIGYSG YSELVFAYGNKHSSISFPENFSNEEKDEFIRLLSRYREKRIMVLGSGFSQNIANHFSEML NLYGFRATANSHLEFLRENVEKDVLIFIVSNSGDTLRLAELVKLAKNHHIDLIAFVGEKK SKIGQLATLTISTETYNPQVVSEYQPNLFFGTALNQFELLLSEALKSIFI >gi|237663589|gb|GG668929.1| GENE 51 49172 - 49750 562 192 aa, chain + ## HITS:1 COG:no KEGG:EF2258 NR:ns ## KEGG: EF2258 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 192 14 205 205 390 99.0 1e-107 MTTRNGLAGDEVISALQKSIRRGKEKDACEFAYEMYITSPQFEEKLWRHLLAISVEDIGM GNPIAALMINNLNMMRKEFQYNESDRAMFFFHAIRYLCGSEKDRSSDLLKNIVIKSFAMG YVPEIPDIALDKHTTRGQEMGRGSEHFLHEASKVIPQAKVENDYKEQYEEIIKKYDPNHV VPSTFVFNPWQV >gi|237663589|gb|GG668929.1| GENE 52 49763 - 51064 777 433 aa, chain + ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 6 422 10 420 446 219 30.0 6e-57 MGNSKIITKLNEILSPIAEKIGNQRHLKAISSGMMFGLPFIVIGSFFLIFANPPINIDHY NPETANFFMKIMAGWKDFAVANYDLITAPYNLTMGIIGLISVFGIAFSLANEYKTNPSMN GMVASVIYLMVCTPVTKGTINLNYLGTNGLFVAIIIGLLVVEVNRVFEVKNIKLKLPDTV PPMVATFINTLVPLLTNIILFYGINLIFLATTKKIFPETVMQVLTPATNIAGSLGGFLLI VTLGNILWLFGINGSSIIFPIVFTLGMAQTGLNAEQMANKEAMTHLMNLQMFRISVLGGA GGTLGLVLLMIRSKVSEYRTIGKLSLIPGICSINEPVIFGLPIVFNPILAIPFLLTPIVS LLLTYIAQSVGLISVGFIIDPSFTPFFAQAYLSSMDWRNIVFCFVLILISAAIYYPFFKV MENNKTKLIDEEL >gi|237663589|gb|GG668929.1| GENE 53 51143 - 51217 61 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSKTTLDVQEIVPFKICVNELIG >gi|237663589|gb|GG668929.1| GENE 54 51554 - 52663 701 369 aa, chain + ## HITS:1 COG:L48477 KEGG:ns NR:ns ## COG: L48477 COG0582 # Protein_GI_number: 15672029 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Lactococcus lactis # 75 368 76 392 394 97 26.0 6e-20 MSKRGENIYKRKDGRWEGRFPRGRKIDGKLKYGYIYGSTYQEVRQKLYVAKANQQTIYQS RGQGAFTLNEWIEQWLVIVKKEVKLSTFASYSYKLSNYVLKTMGDSALNEIDDLRLNKLV EDLIAQGLSKSTICVIFGILSRALNHAVKAKHLKSNPCSTISLPKPKRRHIRALDIEEQK KLENVAYKNPQQQGLSVIVALHTGLRIGELAALRWEDINFKKDTIHVKHTFQRVSVSSFG ESTQLYYDCTKTINSERIIPMSNTVKNALKCQKEHSQGKFVFSRNNKPCEPRLLTYYFHK LRDKVQLDKVHFHQLRHTFATRCLESTSDIVSVSALLGHSSTQMTLDIYADSLLEQRIKA IKRMERTIA >gi|237663589|gb|GG668929.1| GENE 55 53026 - 53694 714 222 aa, chain + ## HITS:1 COG:no KEGG:EF2254 NR:ns ## KEGG: EF2254 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 222 1 222 222 343 100.0 3e-93 MKKNLVVGFVSSVALVGIAIAGGGNVQATVTDSASTDIGIGFSGHGPGTTPGPLDIQWAP IGLDFSNSNMVNTTAVQAFPETTGTNKYVVVSEKRSNEPTREWSLTAQLSDLTNAGGSET LTGAGLKFDAAVKGYTGTNTPESPGSIVDKGARTATVNASSQSVTAGAAAVPVMKDAGTG GASFLGSTAMEMSNVKLEVPANAAKINQQYSGTLTWSLNDTI >gi|237663589|gb|GG668929.1| GENE 56 53751 - 54800 800 349 aa, chain + ## HITS:1 COG:no KEGG:EF2253 NR:ns ## KEGG: EF2253 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 349 1 349 349 660 100.0 0 MKQREKFFMGFIAFLLLSIFFPSVVQAENTSTEEKMGFTVESIIPDNQVDTTKTYFYLAM KPNQKQSIQVKLKSLQDTPLTIQVGIHTAVSSSVGAIDYTNVHPKFDASMKDPISELVKI KDGVKEIPLKGKEEKTITFEITTPESAFSGVKLGSLRFVRKNSTEVKQKKSGLTPQYARV IAIMLTEDEEPFNQGAMLHLKKASLQLANGQKVIAARIQNDQPKVLQELTIQGEIRLKGE KKILYKHKMEKFSVAPNSNFDFNIPIGLNTFKPGTYHFTGKATGDGRTWKWEKEFKVGEA QAKKVNQSAAYQVVIPQWVPWVALSLTVALAGLIAYLVRRGEKWKNEGK >gi|237663589|gb|GG668929.1| GENE 57 54805 - 55134 156 109 aa, chain + ## HITS:1 COG:no KEGG:EF2252 NR:ns ## KEGG: EF2252 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 109 1 109 109 181 100.0 1e-44 MRRRNLQFLLLLVLLIYIPQTTYAENRETTEVGIGFTKTSDIPSKKNPVVNVLPQTTIQS LSIVRSRTQIKRLPKTGDNRITWLSWFGILFLISSFWLFLFRQLCRKGE >gi|237663589|gb|GG668929.1| GENE 58 55137 - 56957 1110 606 aa, chain + ## HITS:1 COG:lin0354_1 KEGG:ns NR:ns ## COG: lin0354_1 COG4886 # Protein_GI_number: 16799431 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Listeria innocua # 140 291 90 240 292 94 42.0 5e-19 MSKSFRLFLCLGLVLSQGIMGVMVSAKTTSSKKVESTSSSSLLSGTDSSIDANTDQSQGT KNSMELTTTSTLNSTLSTKTTPTQENESAKLDKKNKELDPKTTNLIEGTDIDARFATLLR TDSTVQSQGNNWSGFGKDKDQLTIADMSSLTKITVTNKNLDSLKGIKYAEQLTDLSCQFN NLTNLDFSQNRMLETLSCSGNRLTDLDITQNTYLRNLDCSSNQLTTLDVSQNTRLHLLDC SYNQLTVLDVTNNVDLAILVCLSNQLTVLDVSSQNTNLFSIDCSYNELSDITNLNNLTNL QTFDASEQTISIPVPTISNSNQASVDILKTTAHRGLTPSNISIDPSPSFSTNGDQIMLSS VTRESMINKSIRFSYAPQDLIEGSTTGTKSFSGTINFFEVSNLTSDLKPNLKKVYSGDKV EWTWEIINTSSKQASNIYSELNLPVGLIIDQNSIIKNGNVATINDLNGTNNLGALDSNQT IKFTFETIVSGNSGEWLELNGKVNWEDHGARFVTSSNQVKIIDDEQKDKAEETDELEILS VPQSFKYGILNKSNVEQIIHLNTNNYQTNTSVVTDGFYTRMRDERPSLSGWKLTAQLSDF KDVLAS >gi|237663589|gb|GG668929.1| GENE 59 57766 - 58491 471 241 aa, chain + ## HITS:1 COG:no KEGG:EF2248 NR:ns ## KEGG: EF2248 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 238 1 238 1004 326 100.0 4e-88 MKKRVVMTIAGIMGGTFTSSAVALAQTKTSVEERGPVQESTISIPDSEILAEEKEVAATI ESTTTTSTIKTTSDSLEKALEATTSETSSTESGSASQSSASQHRKEIETEETSLKAQTTS TVLTGMIGTSQWSLDPTSGELTIGPGVFSDDVSSAFDSISNVKKVTFSGPVKAGKSLKSL FSSWFALLSIERLDYLDTSQVTDMSYMFTNCTGLQTLDVSNFDTSQVTNMSMMFYNCRLA S >gi|237663589|gb|GG668929.1| GENE 60 59145 - 60224 540 359 aa, chain + ## HITS:1 COG:no KEGG:EF2248 NR:ns ## KEGG: EF2248 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 359 542 900 1004 637 99.0 0 MSNMFDGCRGLQTLDVSKFDTSKVTGMIYMFRDCSGLQTLDVTKFNTSQVTYMWNMFSGC SGLQTLDLSNFDTSQVTNTDEMFDNCDALKKITLGAKSIFGTKTNTNLPSIADTSLYTGR WIGVNTSNTYSDSNTFMSNYDGSVPDTYVWEKASVLNSTLEPSSVRVHSESEVEWTWKIT NSSSKSAENVYSDITLPEGLKIDKNSVKKNNLPVSVDDINGMNNLGTLSSNETVTFTFKT IVSGKPDKWLELMGKVTWEDNGIRTVNSSNKVKIIDEEQKDKGNQTNDLELLSVPVGFRY GILNKSNTPQTIHLNARNYQTHTNVVTDGFYTRLRDDRTKDNGWKLTAQLSDFSDELAS >gi|237663589|gb|GG668929.1| GENE 61 61060 - 61794 308 244 aa, chain + ## HITS:1 COG:no KEGG:EF2247 NR:ns ## KEGG: EF2247 # Name: not_defined # Def: transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 244 1 244 244 445 100.0 1e-124 MTRVLIIARSPLAEQELECTLQRSFDEVFCSSELMKEVEKYSLVTQYFSVVIFSDTISTS EMATYLPYFKKLGLSILRKGQKEQLKTTEYTYLIDEIDDWFDEQTSPNVLIEKIVKLDNK SQKNRIPNLRIIESVQKSIVKRDQVIIYFTKNERKLLYYLYKSKGKCVSRRELCQLMWGE EISNSSLSQLSTLVAHVREKLTHVGFEELWIKTIWGRGYILSDEFIDYLSQNNTFSKGRV SKLL >gi|237663589|gb|GG668929.1| GENE 62 62472 - 62933 257 153 aa, chain + ## HITS:1 COG:no KEGG:EF2245 NR:ns ## KEGG: EF2245 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 18 153 1 136 136 239 100.0 3e-62 MDIRDEKCHVYEQLKLLMEERRELSRQYYDLKEYLIHLEEDKIVSDSSDELSQETKFSNF KSEKVLQDYLIQRKMIGTHQRNYKDYGFIIASILKESGKPLSGKQIYQELAKNNDILPDY RNFVNNILPKINRDDSISVERAMRGYWQYRNTP >gi|237663589|gb|GG668929.1| GENE 63 62986 - 63393 140 135 aa, chain + ## HITS:1 COG:no KEGG:EF2244 NR:ns ## KEGG: EF2244 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 135 1 135 135 214 100.0 1e-54 MKQNFDVTKYDAQIINYIKKTVHNTAINYFVKNSRIEEAEVISGQKFLDFLIEDKTFFVK EMIRVETDNLSFEFDNLDLATEFEKLNREEKSFLMRKYILGYSDYEISIQLSLSRQGVTK KRQRILKKIRERLLR >gi|237663589|gb|GG668929.1| GENE 64 63472 - 63663 218 63 aa, chain + ## HITS:1 COG:no KEGG:EF2243 NR:ns ## KEGG: EF2243 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 63 10 72 72 108 100.0 7e-23 MKSLVELVILVQKDDEEAFAQIVNKFKPLLIKESCRNGSFDEDCYQECMIRLYLALKKFE IRE >gi|237663589|gb|GG668929.1| GENE 65 63830 - 63937 114 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFLFLLGMFIGCLLGITILSCLAIAKYDDMSSGRN >gi|237663589|gb|GG668929.1| GENE 66 64795 - 64947 61 50 aa, chain + ## HITS:1 COG:no KEGG:EF2241 NR:ns ## KEGG: EF2241 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 50 12 61 61 87 98.0 2e-16 MGFSQYYADKIFKECKTLLITKGYSFYKNKKIKRIPVSIIEEVLHISWEE >gi|237663589|gb|GG668929.1| GENE 67 64953 - 66101 608 382 aa, chain + ## HITS:1 COG:BS_ydcL KEGG:ns NR:ns ## COG: BS_ydcL COG0582 # Protein_GI_number: 16077547 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus subtilis # 9 377 4 364 368 150 29.0 3e-36 MRRIANVYKDEKRGTWYFSLTLGYDRFGKRIQPTRRGFKTQKEAKDAMEELKKNYSDSQE IYLQGITFREFYKKYFFPWYKLGTIEKTYVKTDKTLKRALAYFGKMQMEKIRPIHIQEFQ QFLVQECFVTNKEGKIRPLSNNYIKQIFNKLRIIFKRAMVLEVIDENPVDTIGKIRTQRS VVAFWTVDEFKKVYNCSYRCDFQEAFYKRMMRFLFVTGLRSEELFALQWPDIDFHKGTCC VNKSLYIRTRTDYDFSDTKNASSIRTITLDKQTIVDLREWKETQKTIGDDLGFIFTFDGL PPSPKTFLGRVKKLAEIAGVKPIHLHGLRHSHVAFLIEHNNNIYAVSKRLGHSSVKTTLD KYGHLYPNTNQTLADEFTKFEV >gi|237663589|gb|GG668929.1| GENE 68 66524 - 67357 745 277 aa, chain + ## HITS:1 COG:no KEGG:EF2239 NR:ns ## KEGG: EF2239 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 277 1 277 277 565 100.0 1e-160 MTCISLSILNQEQEVRKAKIDDSDSLKELTITGKDFVCLAARDCQLQDGDVIQVCLDTPN TYLMVKLDATLDSSLIYVPEQKWTFPIIKNENAIEARAAYRFETKKPYISVRIATKEEIK SYRNWALNPHDLQHFTGAYPHASANVETRNDATFFACNAIDGTFANLYHGPYPYQSWGIN QQLDAALKIEFGREVLLDKVILTLRADFPHDNYWQQVTLKFSDGTHEVFKTVKTEQRQSF TFAKRAAEWVILTELIQADEPSPFPALTQIELFGQNK >gi|237663589|gb|GG668929.1| GENE 69 67398 - 68459 971 353 aa, chain - ## HITS:1 COG:SP1854 KEGG:ns NR:ns ## COG: SP1854 COG1609 # Protein_GI_number: 15901682 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 347 1 331 335 195 35.0 1e-49 MATITDIAKVANVSISTVSRVLNYDPNLSVTEETKRKIFEAAETLNYTKYKTKNKNKQQE QLTPNLSVQTAPQEPSIAVVQWRSDDEELTDIYYMSIRLGAEKRAEELGYNILKVSQLEQ HNLQGIDGILAIGKFTQKTLQELQQLHPNLCVIGSNFPLEEFDSVNTDFYQATEIALTHL LELGHEKIAFIGAEESENMYGFRRYKTPTTNAYLDIMQHYHLFNEDYFILKENGMLDVKT GEQLTEEALEKWGNDLPTAILAYNDAFAIGVIHTLAAHGIKVPEEISVMGINDISISQYV SPPLSSVHAFTEEMGETGINLLHKRIQMPSIPRRVLLNTELVVRQSTTSPRQK >gi|237663589|gb|GG668929.1| GENE 70 68635 - 69021 261 128 aa, chain + ## HITS:1 COG:no KEGG:EF2237 NR:ns ## KEGG: EF2237 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 128 1 128 128 208 100.0 5e-53 MKRFSFFLLILLALTGCKSGEKEFDEESLQNLKETAQSYSETELQNGDVRLNEYISLKGE IVESDSRSSLIKKGDRFILKSGSSKYQVFNEQKKKLKIGDEVTVYGEYYGFLKGTLIESE ENHDSATN >gi|237663589|gb|GG668929.1| GENE 71 69002 - 70801 1664 599 aa, chain + ## HITS:1 COG:SMb20536 KEGG:ns NR:ns ## COG: SMb20536 COG4289 # Protein_GI_number: 16264263 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 57 567 61 572 617 387 38.0 1e-107 MIQPRIRQNPFETYEEVAEGFEDLLAPLELFFDREYQGHLDLGTHGTVYSKGTRDAEAFL RPLWGLGPYVTQNESEYLNDFLTGIIEGTDPESSSYWGKTKDYDQLIVEMAALSTFLLLN KEKTWDQLTKEQQNNLHSWLIQANENIIPPNNWHFFRVLLNLAMKHCEMPYSKEQIAVDL AVIDRFYVGNGWYYDGVETQVDYYVSFAIHYYSLLYCRFAPEDTARVAIMKERATLFAQE FKYWFTQPGEAIPFGRSLTYRFAQVSFFSALVFADVEALPWGEIKGLISRHLHQWMNKDI FTTDGLLSVGYDYQNMVFAEGYNGPGSPYWAFKTFILLAVPKDHPYWQAETQPISFPEKH LPSPESRNYYQVNDAGTHGLMFPAGQFINYQAHAHDKYSKFVYSSHFGFSTIKSDYWYYE GAYDNCLALAEDDHYFRTKGLDDQYEILDDRIIHQWHPWSDVAIKTTIVPLEGQHLRIHE IETQRALVAYEGGFSIPLFDEKVTCVSDQMAEVKNAKGVSKVENINGFSEAAIIRTEPNT NLLYPLTELPYLKANLSKGKHLLISLVTGVLPNEQIEPVKVRLKENQLLVEEKVVILGN >gi|237663589|gb|GG668929.1| GENE 72 70817 - 71959 1153 380 aa, chain + ## HITS:1 COG:no KEGG:EF2235 NR:ns ## KEGG: EF2235 # Name: not_defined # Def: glucuronyl hydrolase, putative # Organism: E.faecalis # Pathway: not_defined # 1 380 1 380 380 755 100.0 0 MTENGQIEWLPKQISFALNKVRGNLETFKELVPPAASLNQIYYPEENIDWTASFWPGMLF LAKELTNSTEFDEVIATQMASFQHRLDEQIELETHDIGFLYILTAIADYQVNGHEASKEM ALQAADLLMKRYSPKAKIIQAWGNLDDPEQRGRMIIDCLMNLPLLYFAAKMTGKQEYYEA AYNHAKQTQKYIVRENHTTFHTYYFDTETGEALYGKTQQGYSDDSCWARGQAWGIYGFTL SYLYTGDSSFLETAKNVADYFIQELPEDKICYWDLIFNEGSEEERDSSSAAIAACGLLEL SRQLPLNDEKHGYYEKVALELLQALAEKYTTVLQPESNGLLLHGVYDKKTNTGVDECMIW GDYFYLEALTRLAKSWYSFW >gi|237663589|gb|GG668929.1| GENE 73 72009 - 73286 1625 425 aa, chain + ## HITS:1 COG:BH1864 KEGG:ns NR:ns ## COG: BH1864 COG1653 # Protein_GI_number: 15614427 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 13 350 12 364 461 106 25.0 7e-23 MKFWKKGLTAAALLAVAAVTLTACGGSSEKKATEKSEDGKTKLTVTTWNYDTTPEFEKLF RAFEAENPDITIEPVDIASDDYDTKVTTMLSSGDTTDILTMKNLLSYSNYALRNQLVDLT DHVKDLDIEPAKASYEMYEIDGKTYAQPYRTDFWVLYYNKKMFDEAGIAYPDNLTWDEYE ALAKKLSKPEEQVYGAYQHTWRSTVQAIAAAQNNANLIEPKYNYMETYYDRALRMQKDQS QMDFGTAKSTKVTYQSQFENSKAAMMYMGSWYMGTLLTNIDDGKTNVEWGIAEIPQQEKG KATTFGSPTSFAINKNSKKQKAAQKFLDFASGKEGAKLLAEVGVVPSYKTDEIDKIYFAR KGMPSDEVSQKAFNPDTINLEFPSDKNGAAIDKVLQEEHDLIMVGDEKPKDGIANMEKRV KAEID >gi|237663589|gb|GG668929.1| GENE 74 73437 - 74339 694 300 aa, chain + ## HITS:1 COG:lin0760 KEGG:ns NR:ns ## COG: lin0760 COG1175 # Protein_GI_number: 16799834 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Listeria innocua # 21 295 17 291 296 220 45.0 3e-57 MEITSKTKTANKLRRKNTWTALSFIAPNFIGFFLFTLIPVICSLILAFMSWDSFSTPEFV GMKNFTKMIHDDTFWISLKQTFIYTIGVVPLTLICSLGLAILLNRKIRGMKFFRTAFFFP YVTSLVAIAVVWNMLFHPTMGPINQFLKLFIENPPGWTSSSTWALPAIIIVSVWRFMGYY MILYLAGLQSVPRELYEAASMDGAGKWNQFLNVTLPSLRPTTFFVTIMLVINCFKVFDLV QVMTGGGPGRATNVLVYEIYNEAFVKFNFGYASAIAMVLFIIVLAITVAQFKWNQHQEKV >gi|237663589|gb|GG668929.1| GENE 75 74351 - 75229 891 292 aa, chain + ## HITS:1 COG:lin0219 KEGG:ns NR:ns ## COG: lin0219 COG0395 # Protein_GI_number: 16799296 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 27 291 17 281 282 211 42.0 9e-55 MEATFSKKENTRKAKTKKAEKVTPGGILVIILLTLLALITLVPFIWMVSASFKTNNEVFT IPIQWIPKSWHPENYSVIWERIPLLTFFKNTLFLSIVITIIQLFTSSFAAYGFSKMNFRG RDTLFITYIATIAIPWQSYMIPQFIMMRQLGLTDTLWSLVLLQAFNAFGVFLLKQYYSSI PDSLCESARIDGLSEWGIYWKIILPLTKPALASLTIITFVNTWNDYMGPFIYLSSTENKT IQLGLKMFVGLFDAEYALIMAASVVSILPVGIVFLAMQKYFVEGIATSGMKN >gi|237663589|gb|GG668929.1| GENE 76 75242 - 75913 466 223 aa, chain + ## HITS:1 COG:no KEGG:EF2231 NR:ns ## KEGG: EF2231 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 223 1 223 223 369 100.0 1e-101 MFTKQTFDNNIYMKIFRWLYILFIGNLGLLLVNIPFFIAVISLDIDPRNLPLFVVTLLPM GTGMIALLGLIDTFKEEKELDPFKTFFQKFRQFGLRGFLISLLGLGSSIISVTDIFFFAK TTIGKWFIPLMVLLLIFGLAIMLNAWYFQVRNPQASFKDVFRISVYYGLRKWYVSCLNVF LLFSMFAMMFLKPQFGFVVTPVLFLGIIYLNTGKLHEKQKKNK >gi|237663589|gb|GG668929.1| GENE 77 76014 - 76982 803 322 aa, chain + ## HITS:1 COG:no KEGG:EF2230 NR:ns ## KEGG: EF2230 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 322 1 322 322 522 100.0 1e-147 MKKKIIILSSFLIGAIFVLVIFTTSQQSMINNEAIQVEELIVYGDKNMNRIAKQFSDQNN LTSFGKNFWRKTYNGKSPTQELLKVATEDLVQHKMIKQLATELEIAHSQTFGQEKKEWQD QKSSLTLWQFLDAKDQQLQDQIKEKLMEKEKPTQKELRQAFEQLDDKYKKTDYFVEAIEI PNFSGKQAELEKIAEAISPNLSYEETLLEWQNKLPNLVIESYQLKSAEIQKEDIYSLSVG EILSEKAVGTVVKGYHENQYFYIFNKEGGQLLQFEEAPQFGKNAYINTRYKEKLATYQQA TKVDLLEKDREKFFQNYQNKNS >gi|237663589|gb|GG668929.1| GENE 78 76993 - 80772 3799 1259 aa, chain + ## HITS:1 COG:no KEGG:EF2229 NR:ns ## KEGG: EF2229 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 1259 1 1259 1259 2369 100.0 0 MRKKAYFKSVTIFLSILLVFSQLQLFSLPAYGETVSDQPLLFRSVGVAQSGTTYYVDGEG GNNANDGQSPASAWRDFEKVNQTEFQPGDHVLLNAQSTWNNQLLHPKGNGTAAQKIVIDF YDTNDKGETIFETTRRPIINGGGTYSTGTFKRAISGAVQLVNQEYWDISNLEVTNTPELD NLEGYKKPGDAQRAGILVLGYEQNRTFNSVTIRNNYVHDVQTEYYLNLSGNTATKRLKAV GGIIVLGSWFDENGNVVTAANDHRTTTGFNDILIENNVIQRVGLEGIRTKADSDTSRGNT FYKTFSNITIRNNYLEDIAGDGIVLSEAKSGGVVEGNVAVRMCNADYGTQNYAGVWAMSV DDGLFQYNEVYGIKYGFNDAEAYDVDMQSNNVIYQYNYSHHNTGGFLLLMSDQKNSVIRY NISANDGGGNRGTGKDNPGGAGGYNYKEQSIFHYWVKNDGAAMPTIHNNTIYVGDGISTS LFGEGNSSDNSGTVANFYNNILYKEGTGQLKFLSNYPTNGTQPIERKMVDNPEKYFKNNV IWPKEIATEKSGATVEKLVSSGNIFEKPQLEITDNPEKVKELAEQEFTTLKPTKDNVVEF TSKERLRQRAQMFRLKENSPAIGKGLSEVNSPAEDFFGNSLKNKVLDIGAQQASTIEKSI RYQNQVLEISSATGVYPNLPEQVELTYEEVVNEEVVATGKKEFKLQWEAIPQEKINTAGT VEVAATVIGLPIDAVKVTAKVSFEGELGEGKDTVKLKTAQTAYVQKSDGNRAYSAIAGGT AAISSGDAYKYPYGVNYTGNYALKLKNASSAGYNRRIYVEIDTQELKNYQSLKSANLELN VMRYDAWNGAGNTNDERLKNTQFQVDVYGTDTNWMSNTITWNNGPNNLNVPNEEFIARQS FTNSSIMNNQNTISIDISNYLRKLIQSGEKIPAKLSFLLAITDSRLPGYDSDNAGFDAFS KEGAQKAYQDFLTGKLTLPTGQQLAEDSLAPKIVLSNVFEVKHESIEVTTEAGQAPKLPE KTTIFYSDGSQREVTVNWSEVPASSYQKEGIFTVVGRAAGVSMPIIANVKVTAKHIVGFK ELPALDRLTGTSRGELNLPTEVIAKLDDGSETKLKVISWDDDVSNYSPSSPPGTYQFPAA VEEKIGIANPDERKIFQVVQTHAIPERIQFATETATIKSGENYQIQSKVIGQAPHTETDA WSSQVTYELVTPDAGNTVSVDENGLIRTEATTAAGNYQIKVTSKVLPIVTAQFSIKVTK >gi|237663589|gb|GG668929.1| GENE 79 80934 - 81938 1353 334 aa, chain + ## HITS:1 COG:SPy2207 KEGG:ns NR:ns ## COG: SPy2207 COG0180 # Protein_GI_number: 15675940 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 4 334 6 340 340 442 66.0 1e-124 MNTILTGDRPTGKLHLGHYVGSLKKRVEMQADPTNQLFVMIADLQALTDNARNPEKVSAN VLEVALDYLAVGLDPTKTTIFIQSQIPQLAELTMYYLNLVTTSRVRRNPTVKAEIEQKKF GEGVPTGFFIYPVSQAADITAFQANLVPVGEDQKPMLEQAQEIVHSFNQTYGEVLVRPEA VLPPKGMGRLPGIDGNGKMSKSLGNGIYLSDPAEVVQKKVMSMYTDPNHIRIEDPGQVEG NMVFTYLDVFGKNKEYIEELKEHYRHGGLGDVKIKRYLIDVLEEELAPIRRRREELAKNP EAIMEMLHKGSLAAEKVAAQTLTEVKKAMGIQYF >gi|237663589|gb|GG668929.1| GENE 80 81992 - 83770 207 592 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 353 578 2 230 245 84 28 2e-15 MKKTMNLQSFKRFWKMIKPEHPIFYGLMICSLIGNLLIVAMTYIMAIGIDNLLEAIKRVG LKGMTLPLVEEALLGPVLLLILFSIISSITSFIQERAMASLSERVTLRIRKEVTKKFKTL PMAFFDNHQVGDIISRSTTGLNQLSQVLLTGINQFFTSVVTILFAGIMLFYIDAKLTILV LLLIGGSTFMTTKIANKNKVFADQSQAELGQLNNKMEEYLAGNLVTKTFNQQQNAEKTID AVNQQHYRAFKKAQFLNFAIYPAIRFINQLAFIISAILGAMLVLSGGITIGFLQAYLQYI NQISEPISTASYVINSIQAAMASIDRIFVILDEADEQPEATHLETISSPKGAIEFKNVQF GYTPEKILMKNVDFSVQPKKTVAIVGPTGAGKTTLVNLLMRFYEINQGAITFDGIDITKL SRQNLRNLFGMVLQNTWLFEGTVADNIAYGKKDASREEIIEAAKIAQCDHFIRTLPQGYD TIISSENGALSQGQQQLLTIARIILANPPVVILDEATSSVDTRTEAHIQKAMETVTENRT SFVIAHRLSTIENADLILVMKNGDIIEKGTHQELLQAPTLYASLYNSQFQTT >gi|237663589|gb|GG668929.1| GENE 81 83823 - 85550 195 575 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 333 558 278 509 563 79 27 5e-14 MKLMKEFIKENKWIVLATTLTICLQIAGTLGVPKLVGKLIDVGIVSGDQQVIKTIGIQMF LVAFIGTIAAIISSYLSALVAAKFGFQVRGLFFKKFQQFSMKNVDKFGSNSLLTRMTNDV DNVQTMIVLFCQLIFPAPIISLFALVMTFSYSVSLAWVTLASIVFYLVVVYFLMKKGTPL SLKIQPKMDRITTTLREFFTGINMIRAFNNQDFEEQRTNQTFKNYAERMSKVNQIFAWIT PVAFLLMGVVYASILWFGGNLVAVGTLQIGTVTAVIEYTLLTLAYLMIAAMVLVVIPRSV ASLNRLQEVLSEEIEISDPHTEATIAYHPEKALICFDHVTFQYTETADPVLENVSFVIPK GKTTAIVGATGAGKSTLVKLLLRINEVTAGTISYSGTDIRSLSQQTIRQVISYVPQKAFL FSGTILSNLLMGNAKATTEEIRTALEISQSSEFIDSLPQGIESFVAQGGSNYSGGQKQRM CIARALIKPADVYIFDDSFSALDYKTDAALRAALHAQMSDKTLLIVAQRLSTIMNADNII VLDEGRIVGQGTHADLLTTNSYYQDFAKSQGILPK >gi|237663589|gb|GG668929.1| GENE 82 85665 - 86432 859 255 aa, chain + ## HITS:1 COG:no KEGG:EF2225 NR:ns ## KEGG: EF2225 # Name: not_defined # Def: MerR family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 255 1 255 255 464 100.0 1e-129 MEKNYTIKDVSELLNIPKSTIRYWDEQGLISTTRNEENGYRTFDLEDLFKIYDIDFYRKM GIPIKDMLNLYKKTPTDLYATMEATEEQLGQEIKRLQHKYKEIKKRKLHLHALIDLETLV FSDEPIPFDKIVVVDIEDPEEMKVYMEHISTLGIYGDLSESNELTYGICLANHVNKKSLD KVIWLKESSSQYKGFILKVNTQDTRLNNIEEVKKRLAKQGFETGIVVGEHILTQLEEENQ YIEYYYGWIEILGEK >gi|237663589|gb|GG668929.1| GENE 83 86905 - 89425 2192 840 aa, chain + ## HITS:1 COG:no KEGG:EF2224 NR:ns ## KEGG: EF2224 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 840 1 840 1499 1462 100.0 0 MNKAVKNFVSYLMITMLFILNLLPMMNAFAQEVTSDAEKTVEKDGLKVIGKIEDTSSQED IKTVTYEVTNTRDVPIKDLILKQKNTNDSPIKFVLDTLSEERGPTSLEEQAKVETNEKDQ TTDIKLLNLQPNSTRKITINGQITTKASNKLLVSVLIEDNEKGTLVIDLPSKDILADKES VSKEKQETSETKVENQANETASSTNEMTATTSNETKPEAGKAIESIQETALTQATESPEQ PPLKAQPTGPLVPPTPGRGFNTPIYQSVHKGELFSTGNTNLKIANENTAAAQTFLNTRGA SSGYAINNFPLEFADVDNDPNTYNSSRAYIDLNGAKEIAWAGLFWSASRYKGPAYGTNLS DEEISAPVQFTTPNGTVQRVSPQRYHRIDQDATNPGQRFGYNNTGFSNYADVTSILQGDK SATGSYTLADIPMTSSLNGQYQYYNFSGWSLFVVTKDQASKSRAFSIYYGARGNAAGTNN EFTMSNFLTAKQGNLDPIVTWFTVQGDKYWTGDNAQIKNSAGTWVNISNTLNPVNNAMNA TVTDNDEHMVDKYPGKFAPDHPNFLDIDIDRMAIPEGVLNAGQNQINFRTTSSGDDYSTN AIGFAVNAETPEFEIKKEIVEPKETYKVGETITYRVSLKNTKADSEAINSVSKDALDGRL NYLPGSLKIISGPNSGEKTDASGDDQAEYDETNKQIIVRVGNGATATQGGSYKADTAETI YEFKARINERAKANELVPNSATVEAVDILTSAKVNETSNIVEAKIADEQVTGKLTATKTV NNAKPKLGEEIEYTISFRNTIENGILNKVVITDQLPKGLTYVKDSLTSVGDEPKPTSLKE Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:13:19 2011 Seq name: gi|237663588|gb|GG668930.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD9, whole genome shotgun sequence Length of sequence - 23557 bp Number of predicted genes - 21, with homology - 20 Number of transcription units - 13, operones - 6 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 34 - 88 3.1 1 1 Tu 1 . - CDS 164 - 3136 1943 ## COG4644 Transposase and inactivated derivatives, TnpA family - Prom 3159 - 3218 8.0 + Prom 3178 - 3237 6.0 2 2 Tu 1 . + CDS 3267 - 3872 441 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Prom 7415 - 7474 7.4 3 3 Op 1 . + CDS 7499 - 8281 533 ## COG1192 ATPases involved in chromosome partitioning 4 3 Op 2 . + CDS 8274 - 8630 386 ## EF_B0065 hypothetical protein + Term 8663 - 8706 8.9 + Prom 8807 - 8866 7.0 5 4 Tu 1 . + CDS 8890 - 9474 378 ## EF_B0001 replication-associated protein RepA + Prom 9476 - 9535 80.3 6 5 Op 1 . + CDS 9625 - 9903 123 ## EFA0001 replication-associated protein RepA + Prom 9928 - 9987 12.7 7 5 Op 2 . + CDS 10034 - 10702 541 ## COG1266 Predicted metal-dependent membrane protease 8 5 Op 3 . + CDS 10745 - 11002 260 ## EFA0003 TraC protein 9 5 Op 4 . + CDS 11053 - 12372 1040 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 10 6 Tu 1 . - CDS 12375 - 13358 451 ## EFA0004 TraA protein - Prom 13413 - 13472 12.3 + Prom 13444 - 13503 7.3 11 7 Tu 1 . + CDS 13526 - 13597 60 ## + Term 13666 - 13700 -1.0 12 8 Op 1 . + CDS 14170 - 14550 85 ## EF_B0007 pheromone-responsive regulatory protein R 13 8 Op 2 . + CDS 14550 - 14807 265 ## gi|255973304|ref|ZP_05423890.1| prgS protein + Prom 15049 - 15108 5.6 14 9 Op 1 . + CDS 15132 - 15425 145 ## EFA0053 hypothetical protein 15 9 Op 2 . + CDS 15436 - 18108 3393 ## EFA0052 surface exclusion protein Sea1 + Term 18117 - 18160 7.2 16 10 Tu 1 . + CDS 18705 - 19028 420 ## EFA0048 hypothetical protein + Term 19037 - 19074 7.0 + Prom 19067 - 19126 5.2 17 11 Tu 1 . + CDS 19344 - 19661 498 ## EFA0047 aggregation substance Asa1 + Prom 19963 - 20022 61.4 18 12 Op 1 . + CDS 20076 - 20585 338 ## EF_B0011 aggregation substance PrgB + Term 20787 - 20853 30.0 + Prom 20767 - 20826 80.4 19 12 Op 2 . + CDS 20937 - 21320 483 ## EF_B0011 aggregation substance PrgB + Prom 22234 - 22293 80.4 20 13 Op 1 . + CDS 22341 - 23225 823 ## EF_B0011 aggregation substance PrgB + Term 23234 - 23278 8.5 + Prom 23235 - 23294 2.1 21 13 Op 2 . + CDS 23320 - 23557 271 ## EF0486 hypothetical protein Predicted protein(s) >gi|237663588|gb|GG668930.1| GENE 1 164 - 3136 1943 990 aa, chain - ## HITS:1 COG:YPCD1.90c KEGG:ns NR:ns ## COG: YPCD1.90c COG4644 # Protein_GI_number: 16082773 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, TnpA family # Organism: Yersinia pestis # 435 987 207 763 771 459 41.0 1e-128 MKDKKDSFGTYLGEPSAEQLNQFFYLHEKDLEIISTMRLSSTKLGFSLQLSSLRFLGTFC TDINTIPENAIIYVAAQLKINPKEIHNYKRRQTKDDHVKLIKNIYGYKEFSHLKKYLSNW LLNRAIYTTESTNMLFDMLLKKCLDEKIILPGFTTFSRFIASIVEKAEEQLYKQLALIPT NKEKKQLLNLLELVGTPVYGATIKMDILRTPLTDYSLKEISRGFERLKQFQTFSTENWQI KLIPEGKIKILANYAFKAKAQLIQRMSEQKKIALLVAFIYIYKRKAMDEQILALVNFFET IFRRAKNKEANERLRTIKDLDRAASTLSDIVEFVMIESSNNSDSSIRSQILKKYSEESIY SAVTQVRKLVKNEQEPIAIVELLTTYRKFKKFIPDILITLNFDSNNYGNNCKELWSFINN RFPKPITYKMFQTIEHTIPKKWVYYIQENPNQTNKCVLIAAIECLIQSFKRHDIYISQSN LYNNPMDCLLDKQTWLQQKGIVLEQLGLPSSGEEVSLWLKKDLDLSYKEALRRWPTSNMA RIENNSQLIVSRLKKVYENKEEKAFKLRIQQLLPKIDLTDLLLEVNQQLNLTQLFNHLND KDTKMKDLDISLLAVLLAEACNIGFSPVSKNSIDSLKYDRLIYVNHHYIRVDTLSAANQK IIHAHRKLAITKLWGDGYMASADGIRYTTPQRSLYSKSNPKYFGRGRGITFYNFISDQYI GFHGMVVSGTLRDSLYLLEGFLNQPSELTPNQIMTDTAGYSDMIFGLFALLGFQFSPRIA NDKGTKLWRIDSDADYHELNTLSQNKINLTLIQTYWEEILRVAGSLKSGKVNATELTKAL QRNGQPTELGKAITEYGKVYKTKHQLRYISDEIYARQILEQLNKGESRHALCRNIFYGRK GKLYQTYYDGMEEQLNALGLVTNAIIYWNSLYLEKVFEQMKKEGYDCSEEMLRKQSPLIS DHINFVGKYTFKYEQELSDGKLRPLNLEKF >gi|237663588|gb|GG668930.1| GENE 2 3267 - 3872 441 201 aa, chain + ## HITS:1 COG:pli0059 KEGG:ns NR:ns ## COG: pli0059 COG1961 # Protein_GI_number: 18450341 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 2 199 1 199 199 174 46.0 1e-43 MVKIGYIRVSGQDQNLDRQVALLNQLKIDKLFQEKASGKDCNRPEFQKLLNYIREGDCVV VASLDRLGRNYEDIKQTVAFMKQKNVSLQILDAPFLNFNTGNELLDTAMFDMFLSLLSYI AQNEREKIKERQRQGVLLAKQAGRYKGRPTEYAPNSKNPQKRLVYQTVVKQLKQGDTVAE IATENGLSRPTVYKIKKANNL >gi|237663588|gb|GG668930.1| GENE 3 7499 - 8281 533 260 aa, chain + ## HITS:1 COG:BS_soj KEGG:ns NR:ns ## COG: BS_soj COG1192 # Protein_GI_number: 16081149 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Bacillus subtilis # 1 250 1 248 253 188 41.0 1e-47 MARIISVANQKGGVSKTTTSINLGAALHFTFNKSVLVIDMDPQGNATDNFGFDIDGTNVP TIYEVLKDEASITEAILNYKGIDVIPADIALSSAEREFTQVGSEHRLKRVLQPIEENYDY IIIDCPPSLGILTVNAFTVSDEIIIPVEAAYFSLKGLVKLNETIETVKEYTNESLIIRGV LFTKYNERFNISKEMNKTANQISDALHVNIFDTYIRRTITVDEAQAAGSDLISFNKTSTA EDDYIQFTKEFLEKVGDLNE >gi|237663588|gb|GG668930.1| GENE 4 8274 - 8630 386 118 aa, chain + ## HITS:1 COG:no KEGG:EF_B0065 NR:ns ## KEGG: EF_B0065 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 118 1 118 118 178 100.0 8e-44 MSNNRGKSAAERLLGAGKEDTNPTKATTSNEKELKTTHEHIVMNKKNIEKLIKQQGNSKR NADSIRINPILANALKYWTSIGEPEKSKPDVIEETLLKSIPEEYLIKGYEMAKKQNKI >gi|237663588|gb|GG668930.1| GENE 5 8890 - 9474 378 194 aa, chain + ## HITS:1 COG:no KEGG:EF_B0001 NR:ns ## KEGG: EF_B0001 # Name: repA-2 # Def: replication-associated protein RepA # Organism: E.faecalis # Pathway: not_defined # 1 194 1 194 336 357 98.0 2e-97 MNDFQFISANETYRNLYYQLPKVLFTSEFYKTMSNDSKIAYAMLQDRCEYSIQNNWIDQD GHIYFIFTRNELMDILGCKENKIAKIKKELKDKNLLYEKRIPPKKLSTGEFKNYPNRLYL GKLEVSATDVYAISNASYTNEFPESGKNQPSDKHDKIGISFESGKNQRPEESNNTSTLFE SGKNQPNLYLTNSF >gi|237663588|gb|GG668930.1| GENE 6 9625 - 9903 123 92 aa, chain + ## HITS:1 COG:no KEGG:EFA0001 NR:ns ## KEGG: EFA0001 # Name: repA-1 # Def: replication-associated protein RepA # Organism: E.faecalis # Pathway: not_defined # 2 92 246 336 336 153 86.0 3e-36 MVGTIIRAKTKVEKEYNIVLIGEDYQEEIDKCLRRVMHKIKTDSTVKSPKGLFYKSFYNL FVECTIEKKSHLNKNSTDNTPEITTHNWIEYQ >gi|237663588|gb|GG668930.1| GENE 7 10034 - 10702 541 222 aa, chain + ## HITS:1 COG:SP0288 KEGG:ns NR:ns ## COG: SP0288 COG1266 # Protein_GI_number: 15900222 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Streptococcus pneumoniae TIGR4 # 41 222 40 221 230 70 30.0 2e-12 MEYIKRFFIVIGLFLLSQIGMFTYGTLKQSSLQVGQGTMPLLSTLILIVIFIMNIGLLLV LANKLELLNFDSKFLNKKNILIIVIGVVIARLVAILGTILLNNQGIDSTANDAAINNLFT GENPLLIILILGISAPIMEEIVFRAGIIGYFLKDWPILGIALSSISFGLVHGPTDIISFF MYALIGLVLSIAYFKTSRLEVSILIHFFNNLIPAIVIAFGLI >gi|237663588|gb|GG668930.1| GENE 8 10745 - 11002 260 85 aa, chain + ## HITS:1 COG:no KEGG:EFA0003 NR:ns ## KEGG: EFA0003 # Name: traC-1 # Def: TraC protein # Organism: E.faecalis # Pathway: not_defined # 1 79 1 79 543 91 62.0 1e-17 MKKTEKILFLGFSALMFILIGCSNKDNLQENKKSSAVEQTANLTAATPIQSLDPATAVDQ TSITLLANVMEGLYRLDKKIKQNLH >gi|237663588|gb|GG668930.1| GENE 9 11053 - 12372 1040 439 aa, chain + ## HITS:1 COG:lin2714 KEGG:ns NR:ns ## COG: lin2714 COG4166 # Protein_GI_number: 16801775 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Listeria innocua # 1 438 106 552 553 287 38.0 4e-77 MRKDATWTDKTPVTAEDFVFAWQRVVDSNTASQNVGLFAPIENAEEISKGSKAKESLGVK AVNNHTLQIALKEPTPYFTNLLALPAFLPVNHKFADKHKKDYGTSKDTISTNGAFNLTNL EGLGTSDSWVIEKNTNYWDNKNVSMNTIHFQVIKEINTGVNLYKDGQLDEAPLGGEYAKQ YKSDKDYSSSLLATSMYLELNKKPKDSILKNKNLRKSISYAIDRASLVEKLLDNGSIASV GLVPKKLVYDPKTKKDFADQDLVGYDKEKANKYWENAQKELTTPNNLKLDILVGDGEFEK KAGEFLQNQLQESLKGVTVTVTPVPANAHIEKLSKGDFSISLIGWQAGYADPLSFLANFK TNSPMNYGGYESNEFDILLKDTSDKRLKSLKEAEELLIDDAAIVPIIQTGSSKLINPNLK DINLHSVGSRYDYREMKKE >gi|237663588|gb|GG668930.1| GENE 10 12375 - 13358 451 327 aa, chain - ## HITS:1 COG:no KEGG:EFA0004 NR:ns ## KEGG: EFA0004 # Name: traA # Def: TraA protein # Organism: E.faecalis # Pathway: not_defined # 1 320 1 318 319 188 38.0 3e-46 MYLNELMKLCRKEFGENQEEFYKDIFSRRSASSFEIHNQHALQIKDIALLSDRSGLSFHE LINYCKEDFASDFDKDLDYFRTTLDNYAKTQDIELKKNLEELYSKVVSLHFTSLKYMNLY FMMKLILSDKIDKISKIDYPDLLDVKKIFQNFSKFTLFHYKILANISSEFSFSELKSLYD ELFPISENSTSELKEIAALCLNNILAGSFLEKRYEDILPILNIYNELLTHFPSYKYKINY IHNKNLYLYVTTKNLKYLNKVVSYIDLLEDIEGVEIAEQVRTSLEHLLSQEGDEKGKNFI GIVNEHGHIQTYEKSNYKKFFQEKRSD >gi|237663588|gb|GG668930.1| GENE 11 13526 - 13597 60 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIKHSRKMYVIISSLILIFTIVG >gi|237663588|gb|GG668930.1| GENE 12 14170 - 14550 85 126 aa, chain + ## HITS:1 COG:no KEGG:EF_B0007 NR:ns ## KEGG: EF_B0007 # Name: not_defined # Def: pheromone-responsive regulatory protein R # Organism: E.faecalis # Pathway: not_defined # 1 126 1 126 126 229 96.0 3e-59 MIELKATDLNRITCQLTLFNRQRFKLYNGTTERIVYDFSGRNLLINPVSFETDQDMEHFF RQVKLIYFDGKVVGYRGCSELPLKLECRAFQKMVKRQKMLLNAPFNYKVFEENEFREWCE KMRSYK >gi|237663588|gb|GG668930.1| GENE 13 14550 - 14807 265 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255973304|ref|ZP_05423890.1| ## NR: gi|255973304|ref|ZP_05423890.1| prgS protein [Enterococcus faecalis T1] prgS protein [Enterococcus faecalis T1] # 1 85 1 85 85 169 100.0 5e-41 MNLFFYTWSFCLLVLTNMRNLPIARLAIEKGCRKAHGHEGANWLHVNFFAEFGRSLKKEY YRTYLVNQRVFKGLGKDKLPKVRSE >gi|237663588|gb|GG668930.1| GENE 14 15132 - 15425 145 97 aa, chain + ## HITS:1 COG:no KEGG:EFA0053 NR:ns ## KEGG: EFA0053 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 2 97 6 101 101 147 97.0 1e-34 MQNIWRKEMLALMNEDADWYRNEDTERFKRIQELAKKIETASTRQFSSHISKERFEAYQR MGLQFKEIAEEFHITTTALQQWRKDNGYPIYNKNNKK >gi|237663588|gb|GG668930.1| GENE 15 15436 - 18108 3393 890 aa, chain + ## HITS:1 COG:no KEGG:EFA0052 NR:ns ## KEGG: EFA0052 # Name: sea1 # Def: surface exclusion protein Sea1 # Organism: E.faecalis # Pathway: not_defined # 1 890 1 890 890 926 97.0 0 MKKFASAGLSILVATGVAGIGGNEVQAAEQAQPKTPENSSTEQPTVKATQTTEQAITEKQ QQVTEKQAIVDQKQQVADTAKKEKDTIDQSVKDQQAVVDQNKDALDQSQQAVTDQQAVVD EAKKVVDEATPSAIEKAKEQVATDTQAVDEQQKVVDQAQTDVNQQQAVVDEKAKETNAAK VQNEKDQQAVTAAKQEQAKLEELAKNAEAEKAKAEKEQAAKEAELANKQKEEAKAKDQKT KDDQAVADQQSVVTTSQEKVADAKADTAAKQADLTSKENALKDKQAATKQAQNTLDSSKE ELKGHKGLNLPANFTPDYYKKLTEQEKQAMEKEALALNKVFPENQADAAKVTEMINVKNP TEKQKQQMSDYVVGLINDVREKLGLQKLKISNQAMKFAWDVAKYDNPKEFDHDVNAINRA AKENGFKEFPGQNFYENLSMGRFTTQEGKVSMYDFEKAARNALVSMLMNDGHSGYSHLDS LLDANETNMAVSISGDLNDISAKIHIISYNQSKLVEANTYEEGTAPVFKSKETLQKEVAT NQEKLATAQQAESDAQQARSASQQALNTAKTTQATAEKELSVHKATLANLQAVATKSTTN YEEKVRQTATAETSLQQTKDQLATINELIHNRAAVLEKAKTNVAEAQAIEQTSAKVLKEK QEAQKAEENTLNSLKEVLDLAKENLNQKQIALKTSTRSLSRLENAQPTYEKALNELNKAE AAVVQAQEAYENSLKSLEELKEQQAVATLAYTQAQEDLSNAKLELQQYQGILRDLEAQQA EQRRQEALQDQVAKEQQRLEREAKQQQMLVASATSADKTPSLQQLSFSKQKEQPKAQTLT HSEPRKTKQVAKAQESLPHTGEQQSIWLTIFGLFMAVGAISFKNKRRKNS >gi|237663588|gb|GG668930.1| GENE 16 18705 - 19028 420 107 aa, chain + ## HITS:1 COG:no KEGG:EFA0048 NR:ns ## KEGG: EFA0048 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 107 1 108 111 149 74.0 5e-35 MKNYDPNIRWGLHTIKVSFQRWDYKGYVTFVKGGNCKGLDILELEVDDLYDKKFKENPIN FRLLGAGDDGEEWFAMTLKNNEDELFIEDEWKCLKDYILGIEIIDFK >gi|237663588|gb|GG668930.1| GENE 17 19344 - 19661 498 105 aa, chain + ## HITS:1 COG:no KEGG:EFA0047 NR:ns ## KEGG: EFA0047 # Name: asa1 # Def: aggregation substance Asa1 # Organism: E.faecalis # Pathway: not_defined # 1 102 1 102 1296 164 93.0 1e-39 MKQQTEVKKRFKTYKAKKRWVTAPILFIGVLGVVGLATDDVQAAELDTQPGTTTVQPDNP DPQVGSTTPKTAVTEEATVQKDTTSQPTKVEEVAPENKGTEQLAS >gi|237663588|gb|GG668930.1| GENE 18 20076 - 20585 338 169 aa, chain + ## HITS:1 COG:no KEGG:EF_B0011 NR:ns ## KEGG: EF_B0011 # Name: prgB # Def: aggregation substance PrgB # Organism: E.faecalis # Pathway: not_defined # 1 168 265 432 1305 277 90.0 1e-73 MKEPVSKNLVFDQSVVTKDTKISSITGGKFIKAADFNKVNAGDSKDIFTKLRKDMAGKAT GNFKNSFIKEVNLGSNGGYAVLLEKNKPVTVTYTGLNASYLGRKITKAEFVYELQSSSSK SGTLNAVFSNDPIITAFIGTSRANGKEIKTRLTIKFFDASGKEVLPDKA >gi|237663588|gb|GG668930.1| GENE 19 20937 - 21320 483 127 aa, chain + ## HITS:1 COG:no KEGG:EF_B0011 NR:ns ## KEGG: EF_B0011 # Name: prgB # Def: aggregation substance PrgB # Organism: E.faecalis # Pathway: not_defined # 1 127 604 730 1305 223 99.0 2e-57 MKRGDSLQYIVTGDTTELAKVDPKTVTKQGIRDTFDAEKVTIDLSKVKVYQADASLNEKD LKAVAAAINSGKAKDVTASYDLNLDQNTVTAMMKTNADGSVVLAMGYKYLLVLPFVVKNV EGDFENT >gi|237663588|gb|GG668930.1| GENE 20 22341 - 23225 823 294 aa, chain + ## HITS:1 COG:no KEGG:EF_B0011 NR:ns ## KEGG: EF_B0011 # Name: prgB # Def: aggregation substance PrgB # Organism: E.faecalis # Pathway: not_defined # 1 294 1012 1305 1305 531 96.0 1e-149 MTISAKDPQAFILAYGGQELRVTLPTKVKANVSGDVYNSAEQNTFGQRIKTNTVVNHIPK VNPKKDVVIKVGDKQSQNGATIKLGEKFFYEFTSSDIPAEYAGVVEEWSLSDKLDVKHDK FSGQWSVFANSNFVLADGTKVNKGDDISKLFTMTFEQGVVKITASQAFLDAMNLKENKHV AHSWKAFIGVERIAAGDVYNTIEESFNNEKIKTNTVVTHTPEKPQTPPEKTVIVPPTPKT PQAPVEPLVVEKASVVPELPQTGEKQNVLLTVAGSLVTMLGLAGLGFKRRKETK >gi|237663588|gb|GG668930.1| GENE 21 23320 - 23557 271 79 aa, chain + ## HITS:1 COG:no KEGG:EF0486 NR:ns ## KEGG: EF0486 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 79 13 91 118 138 100.0 6e-32 MKEIAIQEKDLTLQWRGNTGKLVKVRLKNTRAMEMWYNKQITEENIQEITTLNIIKNGKS LALEVYPEKSIYVKPNLGR Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:14:29 2011 Seq name: gi|237663587|gb|GG668931.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD10, whole genome shotgun sequence Length of sequence - 32471 bp Number of predicted genes - 44, with homology - 40 Number of transcription units - 20, operones - 12 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 837 657 ## EF0502 hypothetical protein 2 1 Op 2 . + CDS 797 - 1162 199 ## EF0502 hypothetical protein + Prom 1230 - 1289 80.3 3 2 Op 1 . + CDS 1452 - 1793 77 ## EF0502 hypothetical protein 4 2 Op 2 . + CDS 1727 - 2065 131 ## EFA0031 hypothetical protein 5 2 Op 3 . + CDS 2096 - 4294 2002 ## EF0503 hypothetical protein + Prom 4949 - 5008 80.4 6 3 Op 1 . + CDS 5052 - 5324 173 ## EF0505 hypothetical protein 7 3 Op 2 . + CDS 5332 - 5565 184 ## EF0505 hypothetical protein 8 3 Op 3 . + CDS 5571 - 5711 76 ## EFA0024 hypothetical protein + Term 5905 - 5971 30.0 + Prom 6654 - 6713 2.6 9 4 Op 1 . + CDS 6737 - 7003 207 ## EF0507 hypothetical protein 10 4 Op 2 . + CDS 7036 - 7536 467 ## EF0508 hypothetical protein 11 4 Op 3 . + CDS 7549 - 7797 358 ## EF0509 hypothetical protein 12 4 Op 4 . + CDS 7873 - 8289 408 ## COG0629 Single-stranded DNA-binding protein 13 4 Op 5 . + CDS 8313 - 8897 590 ## COG1525 Micrococcal nuclease (thermonuclease) homologs + Term 8941 - 8993 15.5 + Prom 8928 - 8987 10.2 14 5 Tu 1 . + CDS 9008 - 9136 200 ## EF0512 DNA-damage-inducible protein J, putative + Term 9262 - 9332 30.1 - Term 9618 - 9660 1.4 15 6 Tu 1 . - CDS 9826 - 9897 61 ## + Prom 10153 - 10212 3.1 16 7 Op 1 . + CDS 10311 - 10496 223 ## EF_B0037 hypothetical protein 17 7 Op 2 . + CDS 10499 - 10672 250 ## EF_B0036 hypothetical protein + Prom 10726 - 10785 4.9 18 8 Op 1 . + CDS 10904 - 11683 540 ## EF_B0034 hypothetical protein 19 8 Op 2 . + CDS 11683 - 12942 384 ## lin1253 hypothetical protein + Term 13090 - 13125 3.4 20 9 Tu 1 . + CDS 13591 - 14319 482 ## LSL_1826 hypothetical protein + Term 14330 - 14396 9.2 + Prom 14396 - 14455 3.6 21 10 Op 1 . + CDS 14506 - 14940 179 ## EF_B0042 hypothetical protein + Prom 14949 - 15008 3.6 22 10 Op 2 . + CDS 15032 - 15364 263 ## gi|227519173|ref|ZP_03949222.1| conserved hypothetical protein 23 10 Op 3 . + CDS 15413 - 15586 255 ## gi|227519174|ref|ZP_03949223.1| hypothetical protein HMPREF0348_2157 24 10 Op 4 . + CDS 15579 - 15665 131 ## + Prom 15717 - 15776 8.7 25 11 Tu 1 . + CDS 15830 - 16042 298 ## gi|227519175|ref|ZP_03949224.1| hypothetical protein HMPREF0348_2158 + Term 16080 - 16127 10.5 + Prom 16050 - 16109 4.2 26 12 Op 1 . + CDS 16139 - 17116 630 ## lp_1420 nisin resistance protein (putative) 27 12 Op 2 . + CDS 17165 - 19315 214 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 28 12 Op 3 . + CDS 19334 - 20701 1261 ## LACR_A01 lactococcin A ABC transporter permease protein + Prom 20704 - 20763 12.2 29 13 Tu 1 . + CDS 20838 - 21797 231 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase + Term 21876 - 21929 5.0 - Term 21870 - 21910 3.0 30 14 Tu 1 . - CDS 22157 - 23116 212 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase - Prom 23188 - 23247 7.6 31 15 Tu 1 . - CDS 23308 - 23430 115 ## - Prom 23632 - 23691 4.7 - Term 23468 - 23507 6.1 32 16 Op 1 . - CDS 23741 - 24586 573 ## COG3708 Uncharacterized protein conserved in bacteria 33 16 Op 2 . - CDS 24612 - 25052 364 ## Sked_12980 hypothetical protein 34 16 Op 3 . - CDS 25049 - 25930 388 ## SSA_1312 RadC-like protein, putative - Prom 26056 - 26115 6.7 35 17 Op 1 . - CDS 26218 - 26691 331 ## Lbuc_0635 filamentation induced by cAMP protein Fic 36 17 Op 2 . - CDS 26740 - 27339 337 ## COG0582 Integrase - Prom 27364 - 27423 8.4 + Prom 27759 - 27818 6.5 37 18 Op 1 1/0.000 + CDS 27865 - 28803 754 ## COG1893 Ketopantoate reductase 38 18 Op 2 . + CDS 28829 - 29866 1052 ## COG3641 Predicted membrane protein, putative toxin regulator 39 18 Op 3 . + CDS 29891 - 30004 74 ## + Term 30006 - 30042 5.0 + Prom 30582 - 30641 80.4 40 19 Op 1 . + CDS 30811 - 31068 200 ## EFA0074 hypothetical protein 41 19 Op 2 . + CDS 31062 - 31286 231 ## EF_C0011 UvrC family transcriptional regulator 42 19 Op 3 . + CDS 31347 - 31556 214 ## EFA0075 hypothetical protein 43 19 Op 4 . + CDS 31568 - 31870 344 ## EFA0076 hypothetical protein + Term 31881 - 31917 1.1 + Prom 32218 - 32277 5.9 44 20 Tu 1 . + CDS 32297 - 32471 99 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair Predicted protein(s) >gi|237663587|gb|GG668931.1| GENE 1 1 - 837 657 278 aa, chain + ## HITS:1 COG:no KEGG:EF0502 NR:ns ## KEGG: EF0502 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 254 99 352 781 489 97.0 1e-137 FNAVMVKTLFSMDIITAIKQPIMNLTSSIATNMLGIAGTIGIAFVFVILGVKFIGQQRYK RFFGIFLMTILIFTGLSVLKDANTSNSLFDMMFSVDKEVETAFVNINPVLGDVSVPMTEK GKDKNGNEVEQKLSADQRAKSAGNLIASRVFYTNVYEPYLLMNYGTSDVNKIRKKTVKYK DKEYDRINLLLDNDMNSEENDKLMEEVVNYESKDLKNRSIMYYNNWTNTFYGLFYLVVNF IQTVVYFPAKFLTINYCCHSIVPIAVVTVIVVRRTLFN >gi|237663587|gb|GG668931.1| GENE 2 797 - 1162 199 121 aa, chain + ## HITS:1 COG:no KEGG:EF0502 NR:ns ## KEGG: EF0502 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 13 118 376 481 781 220 100.0 2e-56 MLPLLLFAGLFLTETNVFANYFKTFGMTIFMKGMVGFATIFFASFLSLGFQLSNQTENVW QKILTILIYLLTPLGLYVFRKFFANLVTGRVSLSDGVGFIGNPFGTEANMRRAAKEQKAR E >gi|237663587|gb|GG668931.1| GENE 3 1452 - 1793 77 113 aa, chain + ## HITS:1 COG:no KEGG:EF0502 NR:ns ## KEGG: EF0502 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 92 563 654 781 139 95.0 4e-32 MQEQKSEEQLKRQQQESARQKEYEKDRLKKQESLKKINDQSDESTNLTALRNQNRRTGQR SKKRETGHQTLMKRQGEKVLQPTNKPKDMQNKWLLVVQDEQDNQRLVKISNQK >gi|237663587|gb|GG668931.1| GENE 4 1727 - 2065 131 112 aa, chain + ## HITS:1 COG:no KEGG:EFA0031 NR:ns ## KEGG: EFA0031 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 97 655 751 781 168 96.0 6e-41 MVARSPRRTGQPTTRQNIQPKVAAQTVKRSGGTLGSNPAYRRPEVRKKMDQVKQVTQVDV PQTHSTPQRVQPKVNEPITRMNRHNTPIIKKEKRTKQHQLFAENARNLVHRR >gi|237663587|gb|GG668931.1| GENE 5 2096 - 4294 2002 732 aa, chain + ## HITS:1 COG:no KEGG:EF0503 NR:ns ## KEGG: EF0503 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 732 1 732 752 1355 98.0 0 MQGNNLFNNGLLQPKKPPIGQEQQKMTRYHQLRLVFGLVGVLLYPFAILGSIPLLIGLAV DKKDKAANVFDMDYESFLKRNSIVFLSFSAVLFVINVFAFILWIPRGYLSAYLLFPLNLL HTALRFNWETIVALLIGSSGMGAIFLAFSSFVAKRKVISKEDERKKITESKAYKDREKNK FEESQRFTDEQEEAYEEAVETVDIDKYKELSNQLLLGTSEFGLPYIINFSEFNQHVLVPA TTGSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREIAKFYDKEVHAFTDDGDMR YNPVEHGNDISIRDKLVSLAETESVFYSGAAKALLQVTIQLLDEFKGAKVTLSGDTRTTE TVERSLPFVQRFLLPRNVLHLFADAILPNNPKLFEIEVEKKIQKPKKKSVKEGSEILPDS DLDKEEKEEDSQIKNSKFRNISQLGIAQKETETIVLNPETLDLDSYYLLLKRNLRYLPTD KETGENIKQKLFERLFIRYEHKDSPFYLYATSEALQTNINMLLDSELGKLFDTKNAKNVL DVQEIVNQRKLVYVSFNGLIYKEYIRTLAQMLVGDVNYFASEMYRKNVKREVLVIFDEPA SYLNETFIDMVNKGRGAGVYGIFTPQTMADIAKLGDKLMEQLVGNVNTLFIGKTNEKGEA EYWSETMGTYQDIDVTSVTEQEDGYSDVGKSDWSGDRGTKRNVDRFKISPNKIKELRTGE FIIYRTAENVNL >gi|237663587|gb|GG668931.1| GENE 6 5052 - 5324 173 90 aa, chain + ## HITS:1 COG:no KEGG:EF0505 NR:ns ## KEGG: EF0505 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 87 73 159 242 159 96.0 3e-38 MPKVPEYNLQHHLQINDYLIKMLELCNKHPHLKAVVSERRKVYEVKDEKKNQKGVKYFVP DFIFMFLDSIGREVEWQFEIELTLKDKTTL >gi|237663587|gb|GG668931.1| GENE 7 5332 - 5565 184 77 aa, chain + ## HITS:1 COG:no KEGG:EF0505 NR:ns ## KEGG: EF0505 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 77 166 242 242 134 98.0 1e-30 MFPKYIKHLKNYEDARLIYVTPSSIIKEELDMFKEYFIDKEGDEYKEVFDRLHVFSAEEF ESELKRLLEKDKFINWE >gi|237663587|gb|GG668931.1| GENE 8 5571 - 5711 76 46 aa, chain + ## HITS:1 COG:no KEGG:EFA0024 NR:ns ## KEGG: EFA0024 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 44 1 44 162 97 100.0 2e-19 MRRIEKEFNKKLAGYERELKKLGCLDDETGLIPISKRRWHVIWWPS >gi|237663587|gb|GG668931.1| GENE 9 6737 - 7003 207 88 aa, chain + ## HITS:1 COG:no KEGG:EF0507 NR:ns ## KEGG: EF0507 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 88 1 88 88 147 96.0 2e-34 MLTTKEKNRFKKMVEGNKTFHYSYVDRLRQDVRYYVNQCESAVKARESMEILEFIYSLFS DKELPAWYTKADLENDKNSIEKLERWAA >gi|237663587|gb|GG668931.1| GENE 10 7036 - 7536 467 166 aa, chain + ## HITS:1 COG:no KEGG:EF0508 NR:ns ## KEGG: EF0508 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 166 1 166 166 267 100.0 2e-70 MKFIKDVTTLEELKRVYKKLALKYHPDMGGTDKEMAQINNEYEALFDKLKNTHKNKEGEY YQKETTETPQEWQEIIHKLLTLKMENVSIEVIGAFLWVSGNTKPYKEELKALNMKWSNNK KSWYLAPDGYKKRSKKKYNMSDIRNMYGSQVVKEEQAKQKTLTATA >gi|237663587|gb|GG668931.1| GENE 11 7549 - 7797 358 82 aa, chain + ## HITS:1 COG:no KEGG:EF0509 NR:ns ## KEGG: EF0509 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 82 1 82 82 145 100.0 6e-34 MEQQHPTIHTLKIETEFFKAVKERRKTFEIRKNDRNFQVGDILILEEYMNGMYLDDECEA EVIYITDYAQREGYVVLGIELH >gi|237663587|gb|GG668931.1| GENE 12 7873 - 8289 408 138 aa, chain + ## HITS:1 COG:L0301 KEGG:ns NR:ns ## COG: L0301 COG0629 # Protein_GI_number: 15673403 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Lactococcus lactis # 7 134 8 140 141 103 44.0 1e-22 MIKTSAVGRLTKSSELRVTSTGKAVANFALACKRERLDKDGNAQTTFIQCVIWGKPAEVL AKYTQKGSLIAVNGELQSRSYDDQQGQTHYVTELVVAGFEFLESKETVQNREQKQQMPEM ANAEPFYGMEDMEPPVYQ >gi|237663587|gb|GG668931.1| GENE 13 8313 - 8897 590 194 aa, chain + ## HITS:1 COG:BS_yncB KEGG:ns NR:ns ## COG: BS_yncB COG1525 # Protein_GI_number: 16078825 # Func_class: L Replication, recombination and repair # Function: Micrococcal nuclease (thermonuclease) homologs # Organism: Bacillus subtilis # 11 193 8 207 211 151 42.0 8e-37 MKKLIGKKWLLLTAVATFLLSGCASLEQKAQDSVKEVTENVTQTISNDQRIPADFVRHVD GDTTVLKIDGKEQKVRFLLIDTPETVKPKTKVQPFGLEASKRTKELLSTASEITFEYDKG DKTDRYGRALGYILVDGTLLQKTLVSEGLARVAYVKEPNTKYLAELEQAQEQAKNEALGI WSIPGYVTQRGFSK >gi|237663587|gb|GG668931.1| GENE 14 9008 - 9136 200 42 aa, chain + ## HITS:1 COG:no KEGG:EF0512 NR:ns ## KEGG: EF0512 # Name: not_defined # Def: DNA-damage-inducible protein J, putative # Organism: E.faecalis # Pathway: not_defined # 1 40 1 40 88 70 100.0 2e-11 MATTKKKPIHVNVDENLKEEAEQLFDDLGLNMTSAITIFLAS >gi|237663587|gb|GG668931.1| GENE 15 9826 - 9897 61 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLITAERFLVVSQGTTRVNVLFR >gi|237663587|gb|GG668931.1| GENE 16 10311 - 10496 223 61 aa, chain + ## HITS:1 COG:no KEGG:EF_B0037 NR:ns ## KEGG: EF_B0037 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 61 1 61 61 73 77.0 3e-12 MNELQLKLDLEKAQLEYQKLSQAINENDTVTLLLNYGCLKNANDRLNQLSFLLNHIEWKD V >gi|237663587|gb|GG668931.1| GENE 17 10499 - 10672 250 57 aa, chain + ## HITS:1 COG:no KEGG:EF_B0036 NR:ns ## KEGG: EF_B0036 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 57 1 57 57 71 92.0 1e-11 MAKKKKKYCVTIVETLEVAVYVYAESEEQAHELVSNMYYDQEIILTEDNHETTEFII >gi|237663587|gb|GG668931.1| GENE 18 10904 - 11683 540 259 aa, chain + ## HITS:1 COG:no KEGG:EF_B0034 NR:ns ## KEGG: EF_B0034 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 255 1 256 258 300 63.0 4e-80 MDFQNIQTVKELTYALKQYNQNLATTIFDDTQGYISVAFKKDKIEKNGNDFQFLCFYPNY EVALYPVVTLLSYLEKLPEKATVAIKDPDGNYSSLYLTIDETIDKGTKYKWLVISDRLSY ERFYLTSQLTIQEQALEKMLKELETEPNNRLEAIQDWLCQQTDKDLLTGILKEDRTLKGA EAYCIQKAYEIRNGNGAMASHITVFNWVREYYTLDELPTDKPKIQATIKSDYINQKIQRP KPVETKNNNEIDLFEGEDF >gi|237663587|gb|GG668931.1| GENE 19 11683 - 12942 384 419 aa, chain + ## HITS:1 COG:no KEGG:lin1253 NR:ns ## KEGG: lin1253 # Name: not_defined # Def: hypothetical protein # Organism: L.innocua # Pathway: not_defined # 5 418 7 444 453 312 41.0 2e-83 MNTNDYVENKLQPPRAFFEWCYTSFRTYVWKNKNETIVASTRKHDWIIEKKLRKNSRLTF YDSSNCFQIVLSTSKRIEVQTYKVISEYENGVQCFREQLECIEIFSNNQHIKIGKICLPV YYGYNMGIALYPNEWKKRLERVSELKYLNLERLNVDNLATTYKYRTLIEFAQKINAHKLA YDVMSGAVDMRILTKNCLRKYKTFLKNTDNSLKEIQLKQTFESLNIPMVKGIEKYVLKSD ISDFPNEIGAVKFQNWLVKQGKSFKYYQDYLNMLTLLKIEINKRNQLPPDLEVAHDCAVD RINQVNYEERDKEIKERLEQLRKYERDIDGFTFVLPKRANDIKKEGKALNHCVASYISRH AKGETTIIFVREKKNPQKSYFTLEYNYNRVVQLQGKKNRQKVPDELKQAVDKWVKVIKD >gi|237663587|gb|GG668931.1| GENE 20 13591 - 14319 482 242 aa, chain + ## HITS:1 COG:no KEGG:LSL_1826 NR:ns ## KEGG: LSL_1826 # Name: not_defined # Def: hypothetical protein # Organism: L.salivarius # Pathway: not_defined # 3 230 685 886 1229 68 31.0 2e-10 MTRLEQAQGKLQRLKRESEETHRLIRAEHDRIPFGQPNIIGRGDIYKKVNGYHDRAIKLL KEQEKQEKRVEMLEKVEDFKEKNELIKDVHVVGKSSYATVGAKTSVNNIDYFKNELKELE KANEKAKAYNKTKPAIKARTYGAAITKLKNKIATLEQMKEADENKVVSERTKELIESGAV TQWKKKPIFYFVKGLRKVALEIDENGEFFISNYYPACTDADKEFINKLLDPAAESTKKET FC >gi|237663587|gb|GG668931.1| GENE 21 14506 - 14940 179 144 aa, chain + ## HITS:1 COG:no KEGG:EF_B0042 NR:ns ## KEGG: EF_B0042 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 12 142 33 163 164 75 32.0 7e-13 MRRLSNTTMANETLKKEACYRMMLADVSSSVIDEFMKTGKCHYTSNYFQGENILVTEEIE EIIKTAEKKYGFLVYYITENKTADGQRFLSLFYVGRDTSDWLYCHRDLESYRQYVYVVNT TNPAFSEFGMIQFDPILGSLLRTA >gi|237663587|gb|GG668931.1| GENE 22 15032 - 15364 263 110 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519173|ref|ZP_03949222.1| ## NR: gi|227519173|ref|ZP_03949222.1| conserved hypothetical protein [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] predicted protein [Enterococcus faecalis Merz96] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] hypothetical protein HMPREF9512_03005 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9492_02169 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_02734 [Enterococcus faecalis DAPTO 516] conserved hypothetical protein [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] predicted protein [Enterococcus faecalis Merz96] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] hypothetical protein HMPREF9492_02169 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9512_03005 [Enterococcus faecalis TX0635] hypothetical protein HMPREF9493_02734 [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF9517_01767 [Enterococcus faecalis TX1341] # 1 110 3 112 112 186 100.0 5e-46 MEIRELTIIEDPCFYQYTTIKELESFNTSELTIALSVVRKEQRRLKEKVYHSGSGDQVDK NNVKLINKYRANLEKLLFIKQGYIPDAITQNMIDTLIKNNKKSIQKIQKG >gi|237663587|gb|GG668931.1| GENE 23 15413 - 15586 255 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519174|ref|ZP_03949223.1| ## NR: gi|227519174|ref|ZP_03949223.1| hypothetical protein HMPREF0348_2157 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] conserved domain protein [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2157 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] conserved domain protein [Enterococcus faecalis TX0635] conserved domain protein [Enterococcus faecalis TX1341] conserved hypothetical protein [Enterococcus faecalis 62] # 1 57 1 57 57 89 100.0 6e-17 MTEKIDLKKLYHESKKERTEKQTKMERALEGVVYGFPRNTADDPILKITMSQENTNG >gi|237663587|gb|GG668931.1| GENE 24 15579 - 15665 131 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDEKRKDKIQRLLALANDEESMTALAKR >gi|237663587|gb|GG668931.1| GENE 25 15830 - 16042 298 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519175|ref|ZP_03949224.1| ## NR: gi|227519175|ref|ZP_03949224.1| hypothetical protein HMPREF0348_2158 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] conserved hypothetical protein [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2158 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis T2] conserved hypothetical protein [Enterococcus faecalis TX0635] conserved hypothetical protein [Enterococcus faecalis TX1341] conserved hypothetical protein [Enterococcus faecalis TX0630] conserved hypothetical protein [Enterococcus faecalis 62] # 1 70 1 70 70 125 100.0 1e-27 MKKYKELKEVEIQAISGGVAVTPPKGAFPNGDFKPWNVPSGTTFPWQGACPVGSVTAGYI GGGQNLCRRP >gi|237663587|gb|GG668931.1| GENE 26 16139 - 17116 630 325 aa, chain + ## HITS:1 COG:no KEGG:lp_1420 NR:ns ## KEGG: lp_1420 # Name: nsr # Def: nisin resistance protein (putative) # Organism: L.plantarum # Pathway: not_defined # 21 303 22 289 323 123 29.0 1e-26 MKIFKYLFTLGCLFFLGIYILHQSNQYLSLDTRSVDAVQIMSQSGIIENQKKWASTLSNY NYGKSVKNISELNKLLIRGNKHSSILNVSAESMESDLNTKENLPSSMEIEGLSVISVPGL YTTNNEFRNNYSNTLAKLIDSAKGDIVLDLANNSGGDVVPMIIGASSLIPTGKILNSIDK NGNKFPIYLESNKLFGGITNYLEDSSKQLKTQKYSFKKSKKVSVIISDRTASAAEVLTLV LKTNPNVTVLGTPSAGYTSWNETAVLPNKDNPSNFWYMIYTAGYFETIKNHEVFNNTKII PDVEVRSAYLDIANKQLIEAIRRIK >gi|237663587|gb|GG668931.1| GENE 27 17165 - 19315 214 716 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 496 706 36 252 329 87 30 1e-16 MKKIIYQQDERDCGVACVAMILKHYKSEIPIHKLRELSGTDLEGTSALGLKKNLEKIGFD SPVIQADNEVWKEKDLPLPLIAHVLIDNKYMHYVVVYEIKGETLLIADPDPTKGKIKKTI KEFSKEWTGILLLPTPKESYSPTREKVAGLSSFLPIIWRQKGLVFHIVLASLFITLFGIG SSYYFQGLLDYFIPNQAKSTLNIVSMGLIVVYLFRVLFEYSRSYLLVVLGQRMSMAVMLQ YFKHVLTLPMNFFATRKSGEIISRFLDANKIIDALASATLSVFLDIGMVLLVGITLAIQN GTLFLLTLASLPFYVVAILAFVKSYEKANQEEMAAGATLNSSIIESLKGIETIKAYSGEE KVYDRVDREFIKLMKKSFRTVTLDNVQQGIKHTIQLISSALILWLGSFYVMEGKISLGQL ITYNALLVFFTDPLQNIINLQVKMQTAQVANKRLNEIFAIEPEKTNDSSFGEISNQIFRE GITLENVSFSYNMKAQTLNNISCTIPPKSKIALVGVSGSGKSTLAKLLVNFYAPSEGVIR YGKMNHLDIPFQQLRKHVTYVPQESFFFSGTIVENLTFGLQETPSFERIVEVCEKVQLST FIEQQPLRYDTILEEGGTNLSGGQRQRLAIARALLKNADILILDEATSGLDTLLEHAILD YLLTLEDKTVLFIAHHLSIAKNCEQILVLHEGKLVEQGTHDELRYNQGIYQRLWDI >gi|237663587|gb|GG668931.1| GENE 28 19334 - 20701 1261 455 aa, chain + ## HITS:1 COG:no KEGG:LACR_A01 NR:ns ## KEGG: LACR_A01 # Name: not_defined # Def: lactococcin A ABC transporter permease protein # Organism: L.lactis_SK11 # Pathway: not_defined # 1 452 1 454 456 300 41.0 7e-80 MEQKDWLDQSSIYSQQHHTFYRWVLYPVILFLCLGGFFLVFAKKEIVIRTPAQLTAQKVE KLQVPIEAKIKANNLKENQTVKKGESLVTFDTTSLQNEKTQIEQENTTIEQQKSAAQIFI DSLMSEQNLFETEDAFGYSNQVKSFLAEKEATLYALKQSEVATQKEQETYDKAKEQLEKQ LTMRQKEQRELEQVRTAWIDEQSLEGFSPEITSKYQLWKVQLTDAPEEQKKQVKATILAT IDELITQKKKEIEQLQVEQAKLVVPSTTENEINSQKEKGKQSKELALATAKEKVAELTET QKKNDIALKTINEQLTQSTLKAPITGTIHLNAEVENQLEVPKGTTLAEVYPEHKNSELRF TALLPTSESMRVKPGMDIHFKLDKKGVATKTINGTLKEISENSTTTDQGTFYTIKGILNP SDNFTSRYGLTGELSLIVGKKTYWQEIKDILFNVN >gi|237663587|gb|GG668931.1| GENE 29 20838 - 21797 231 319 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 4 307 10 315 317 93 29 1e-18 MTYKHLTIDELTMIESYYLQHNKPVEIANRMGRAIQTIYNVVNKFKQGKTALDYWHQYKE NKKKCGRKVIQLPAHEVDYIKEKVTLGWTPDVIIGRKERPVSCGMRTLYRLFSKGIFDID TLPMKGKRKPNGHQEKRGKQQYQRSIHDRPDNYPDFNSEFGHLEGDTIVGIHHKSAVITL VERLSKVIITIKPNGRKALDIETALNQWFSRFPKNFFKSITFDCGKEFSNWKAISNQHDI DIYFADPGTPSQRPLNENSNGILRRNGLPKSMDFREVNQTFISSVSNQRNHIPRKSLNYR TPIEIFLSYVQEAFYSNLI >gi|237663587|gb|GG668931.1| GENE 30 22157 - 23116 212 319 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 5 307 11 315 317 86 27 2e-16 MTYIHLTSNELAMIEAYYNNHQSVAKTAVLLNRSRQTIHKVYQFFKTGHNALDYFNQYKK NKTRCGRRPIVLSDEQTEYIQKRVVQGWTPDVIVGRAEFSISCSMRTLYRMFKQGVFEVT HLPMKGKRKANGHKETRGKQSFRRSLRDRENDYSKFNQEFGHLEGDTIVGKKHKSAVITL VERLSKVIITLQPEGRRAIDIENRLNQWMQSVPKHLFKSMTFDCGKEFSNWKSISNINDI DIYFADPGTPSQRGLNENSNGLLRKDGLPKQMDFNEVDESFIQSIASKRNNIPRKSLNYK TPIEVFLSHICKEELSNLI >gi|237663587|gb|GG668931.1| GENE 31 23308 - 23430 115 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFETYLKFSDMKPYCYPHPLSYILKVPLTYKLPDTTILFF >gi|237663587|gb|GG668931.1| GENE 32 23741 - 24586 573 281 aa, chain - ## HITS:1 COG:FN0315_2 KEGG:ns NR:ns ## COG: FN0315_2 COG3708 # Protein_GI_number: 19703660 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 131 279 1 149 151 176 53.0 3e-44 MVIIKSFNDTIRYIEDVLDDEIDEAEITRLSTYSYAMFSRLFSILTNMTLSEYMRLRKLS KAAIEIRSSDIKIIDVAIKYGYESSDAFTYAFKLFHGVTPSDVRRGLAYKVISPIQLSLS VRGGKDMEVTIQRKKSIYVCGVLLENIDAEQCSNAWLELYKRYSHKELSPFGNGKSYGVC LITNEANKLNYMASYDIRKSEIDKKMNLDFMEIEETEYAIIKLKGKVPECIQEGWKYAME VFFPEEGYRHSGKPDLEVYFEGDMKKENYSMELWIPVEKEN >gi|237663587|gb|GG668931.1| GENE 33 24612 - 25052 364 146 aa, chain - ## HITS:1 COG:no KEGG:Sked_12980 NR:ns ## KEGG: Sked_12980 # Name: not_defined # Def: hypothetical protein # Organism: S.keddieii # Pathway: not_defined # 8 146 9 143 148 93 34.0 2e-18 MNEILKTELGNVQKVQIDKLHLIYSEIDNSIEDQQKGWPEFEAKFPSLTGRKLLGLDYDE KNKYRMCSIVKEEDNGDTFGFKTFMFEGGTFMRLRLNYEPPELYEKIGPAYNLLISNYDQ QIDWSLPFIEQYKARNILDIMVPVKQ >gi|237663587|gb|GG668931.1| GENE 34 25049 - 25930 388 293 aa, chain - ## HITS:1 COG:no KEGG:SSA_1312 NR:ns ## KEGG: SSA_1312 # Name: not_defined # Def: RadC-like protein, putative # Organism: S.sanguinis # Pathway: not_defined # 1 290 18 307 308 310 52.0 6e-83 MLLESYGYEYTIEYIEAIMSMGNGATLINNDSQYPLVYFDNGLPDKSISNTLNILGYGFE EFYVEDIEVNVLEEVIHKLNKYLENGSVIAGPIDMGYLKYNPNHSNLLGVDHFVCITKFV KSNIYLHDPAGFPFMKVPLKEFIKSWEAKNIEYKRGSFSMWGNLKKVSEPCDRKIYNSVI SIIKTRYMHSEENVIENYAEAIFQNGLNEMQEEMHKYFSFRLASVRNLYMSNFLREFDKE KALIKEKIAINFSKAHIESVNKEFKKLSNTLKEISILDNKFKQLCINYEEGKL >gi|237663587|gb|GG668931.1| GENE 35 26218 - 26691 331 157 aa, chain - ## HITS:1 COG:no KEGG:Lbuc_0635 NR:ns ## KEGG: Lbuc_0635 # Name: not_defined # Def: filamentation induced by cAMP protein Fic # Organism: L.buchneri # Pathway: not_defined # 11 153 3 143 218 110 40.0 2e-23 MNEEKQPKFPDKYHLSRKESVYLLKKNMVELVYNAGKFEGLDTTLLQTEEIIKYNRANNV AVDDVLTVVNLKRGFELLLNDVQEPLLETSKRINRIVAAEEALFPGEIRTGGVEVSTIQG RSIPPMLIEDEVKNQYDEILNQEISDTEKALRLFLFI >gi|237663587|gb|GG668931.1| GENE 36 26740 - 27339 337 199 aa, chain - ## HITS:1 COG:BH4039 KEGG:ns NR:ns ## COG: BH4039 COG0582 # Protein_GI_number: 15616601 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus halodurans # 1 190 1 173 182 99 36.0 3e-21 MKSVEPIRDKKKIDAMKAILASGKYGQRNLVLFSIGINTAYRISDLRQLKLSDVLEISRG RVIVKERLAMKEQKTAKHNSVFISNKLRKVILDYVQSEFSEQLQVQDFSKYLFPSRKGAD TPLTRQSLWRIIHEAGMAVGLKEIGPHSMRKTFGYFLYKQGTKTEIIQSLLNHSSQRETL RYIGITQEDKDTAVKSLDL >gi|237663587|gb|GG668931.1| GENE 37 27865 - 28803 754 312 aa, chain + ## HITS:1 COG:L157055 KEGG:ns NR:ns ## COG: L157055 COG1893 # Protein_GI_number: 15673305 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Lactococcus lactis # 1 312 1 312 312 512 80.0 1e-145 MKIAIAGAGAMGSRFGLMLKQGGNDVLLIDGWQEHINAIKENGLKANYNDEEITVKVPIV NQNEVPTGEQFDLIILFTKAMQLEKMLQDVKPLIADHTEVLCLLNGIGHEDVIEKFVPME KIFIGNTMWTAGLEGPGKAKLFGSGSVELQNLGIGQEESAKKLAETLSASGLNAKYSDNI HYSIYRKACVNGTMNGLCTILDVNMAGLGATKPAHDMVVTIVNEFAAVAAKENVNLDIPE VIEHVETCFDPTTIGMHFPSMHQDLIKNNRLTEIDYINGAISRKGKKYGVVTPYCDFLTQ LVHSKEEILGAK >gi|237663587|gb|GG668931.1| GENE 38 28829 - 29866 1052 345 aa, chain + ## HITS:1 COG:SPy0851 KEGG:ns NR:ns ## COG: SPy0851 COG3641 # Protein_GI_number: 15674884 # Func_class: R General function prediction only # Function: Predicted membrane protein, putative toxin regulator # Organism: Streptococcus pyogenes M1 GAS # 3 345 5 352 352 268 53.0 2e-71 MEEKLTPKIFLNKVLAGTATGIIVGLIPNAVLAAILKLFGENTLAVTITQMAVIFQLATP LLIGALIAVQFGFKPMQMLVVAGAAFVGSGVVKFNPDTATYIGAGTGDIINTMITASIAV GMILLIGEKFGSVAIVATPIVVGIGAGLIGYYLYPYVTKITAAIGDLINTFTTLQPILMS ILIACSFAFLIISPISTVAIGMAIQLNGVSAGAAAMGVAATTVVLVVNSWKVNKPGVTLA IALGAMKMMMPNLFRKPIILVPCLFTAIISAIPVALFSVSGTPASAGFGLVGLVGPLASL DAGLSIILLLISWFVVPIVAAFVGQILFEKILKLYDRKDVFEFLG >gi|237663587|gb|GG668931.1| GENE 39 29891 - 30004 74 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLTLFCAIEVGESQRKEKGTLNSVFLVNSTMKYLNTL >gi|237663587|gb|GG668931.1| GENE 40 30811 - 31068 200 85 aa, chain + ## HITS:1 COG:no KEGG:EFA0074 NR:ns ## KEGG: EFA0074 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 2 85 12 95 95 132 98.0 4e-30 MKNPLVTGYGIEIMSNGRLYSANFQRYKNRVKKEENPLIIFESMTEKVEQVFLELAEEVI RTNPKTKQEFKEMIKEYCYKEDNKW >gi|237663587|gb|GG668931.1| GENE 41 31062 - 31286 231 74 aa, chain + ## HITS:1 COG:no KEGG:EF_C0011 NR:ns ## KEGG: EF_C0011 # Name: not_defined # Def: UvrC family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 64 1 64 69 67 46.0 1e-10 MVVRKTYDHWGIEISTWNKSNIVTFIDCDCGQLAKRELGKYNQFKCDSCNKEYKLYQGNY IPIDEKTNEVAQND >gi|237663587|gb|GG668931.1| GENE 42 31347 - 31556 214 69 aa, chain + ## HITS:1 COG:no KEGG:EFA0075 NR:ns ## KEGG: EFA0075 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 69 14 82 82 117 97.0 1e-25 MNFGYLNFGTKDAVLVIAIFITLILTVLFRWSALEFVFSSSAVGIAFFAGNMKQDKRIAD RQNKKSEKK >gi|237663587|gb|GG668931.1| GENE 43 31568 - 31870 344 100 aa, chain + ## HITS:1 COG:no KEGG:EFA0076 NR:ns ## KEGG: EFA0076 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 100 1 100 100 186 100.0 2e-46 MPVNKNGLPFYLDRKLDVIRFGVDPDNHVKEQQLFKYPVKTDKPNKKERFIEKESESLIQ LGYKIVVDTVTGVNYLESPRGGITPLLDEIGKVCIDKISK >gi|237663587|gb|GG668931.1| GENE 44 32297 - 32471 99 58 aa, chain + ## HITS:1 COG:pli0067 KEGG:ns NR:ns ## COG: pli0067 COG0389 # Protein_GI_number: 18450349 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Listeria innocua # 6 58 6 58 426 91 75.0 3e-19 MNLTFDYTKEPSRDVLCIDVKSFYASVECVERGLDPLKTMLVVMSNSENSGGLVLAAS Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:16:42 2011 Seq name: gi|237663586|gb|GG668932.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD11, whole genome shotgun sequence Length of sequence - 40981 bp Number of predicted genes - 51, with homology - 49 Number of transcription units - 25, operones - 15 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 294 230 ## EFA0031 hypothetical protein 2 1 Op 2 . - CDS 312 - 647 375 ## EFA0032 putative lipoprotein 3 1 Op 3 . - CDS 664 - 3156 1674 ## EF0500 hypothetical protein - Prom 3273 - 3332 48.8 - Term 3928 - 3974 14.3 4 2 Op 1 . - CDS 4061 - 4891 536 ## COG1968 Uncharacterized bacitracin resistance protein 5 2 Op 2 . - CDS 4891 - 5187 153 ## gi|331082743|ref|ZP_08331866.1| hypothetical protein HMPREF0992_00790 - Term 5543 - 5571 -0.1 6 3 Tu 1 . - CDS 5633 - 6550 222 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 6593 - 6652 4.1 - Term 6670 - 6708 5.1 7 4 Op 1 . - CDS 6733 - 7347 132 ## COG1396 Predicted transcriptional regulators 8 4 Op 2 . - CDS 7337 - 7534 172 ## CLK_0105 transposase and inactivated derivatives - Prom 7562 - 7621 9.4 + Prom 7576 - 7635 3.7 9 5 Tu 1 . + CDS 7700 - 7840 164 ## gi|307287457|ref|ZP_07567509.1| helix-turn-helix protein + Prom 8442 - 8501 80.3 10 6 Op 1 . + CDS 8668 - 8826 119 ## gi|227518259|ref|ZP_03948308.1| hypothetical protein HMPREF0348_1242 11 6 Op 2 . + CDS 8861 - 9541 599 ## COG3316 Transposase and inactivated derivatives 12 6 Op 3 . + CDS 9582 - 10511 1026 ## COG1705 Muramidase (flagellum-specific) + Term 10513 - 10568 12.3 + Prom 10797 - 10856 8.6 13 7 Tu 1 . + CDS 10991 - 11695 882 ## gi|227518262|ref|ZP_03948311.1| hypothetical protein HMPREF0348_1245 + Term 11710 - 11754 11.1 + Prom 11801 - 11860 9.7 14 8 Op 1 . + CDS 12072 - 13100 1034 ## EF2253 hypothetical protein 15 8 Op 2 . + CDS 13103 - 13483 511 ## gi|227518264|ref|ZP_03948313.1| hypothetical protein HMPREF0348_1247 16 8 Op 3 . + CDS 13483 - 13692 229 ## gi|227518265|ref|ZP_03948314.1| hypothetical protein HMPREF0348_1248 + Prom 13694 - 13753 3.3 17 9 Tu 1 . + CDS 13815 - 14534 633 ## gi|227518266|ref|ZP_03948315.1| hypothetical protein HMPREF0348_1249 + Prom 14836 - 14895 80.3 18 10 Op 1 . + CDS 15077 - 16501 845 ## Corgl_0616 lipoprotein + Term 16508 - 16553 8.2 + Prom 16521 - 16580 7.9 19 10 Op 2 . + CDS 16702 - 17028 354 ## gi|227518268|ref|ZP_03948317.1| hypothetical protein HMPREF0348_1251 + Term 17077 - 17151 -0.1 - Term 17763 - 17805 -0.3 20 11 Tu 1 . - CDS 17907 - 18065 107 ## COG3041 Uncharacterized protein conserved in bacteria - Prom 18111 - 18170 80.4 - Term 18075 - 18140 16.5 21 12 Tu 1 . - CDS 18322 - 18441 184 ## EF0512 DNA-damage-inducible protein J, putative - Prom 18635 - 18694 6.1 - Term 19050 - 19103 13.0 22 13 Op 1 . - CDS 19154 - 19756 518 ## COG2184 Protein involved in cell division - Prom 19826 - 19885 5.9 23 13 Op 2 . - CDS 20003 - 20941 343 ## Galf_1231 hypothetical protein - Prom 20984 - 21043 6.2 24 14 Op 1 . - CDS 21053 - 21394 256 ## COG2337 Growth inhibitor 25 14 Op 2 . - CDS 21394 - 21624 275 ## gi|227518274|ref|ZP_03948323.1| antitoxin MazE - Prom 21669 - 21728 6.9 + Prom 21633 - 21692 10.3 26 15 Op 1 . + CDS 21854 - 22459 557 ## COG2184 Protein involved in cell division 27 15 Op 2 . + CDS 22475 - 23047 414 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 23292 - 23324 2.0 - Term 23234 - 23284 -0.9 28 16 Tu 1 . - CDS 23480 - 24439 379 ## COG2826 Transposase and inactivated derivatives, IS30 family - Prom 24476 - 24535 6.5 - Term 24517 - 24556 -0.4 29 17 Tu 1 . - CDS 24567 - 25247 764 ## COG3316 Transposase and inactivated derivatives - Prom 25292 - 25351 6.3 + Prom 25437 - 25496 6.6 30 18 Op 1 . + CDS 25570 - 25740 252 ## gi|115534809|ref|YP_783891.1| hypothetical protein pRE25p07 31 18 Op 2 . + CDS 25754 - 26356 600 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 32 18 Op 3 . + CDS 26372 - 27064 524 ## COG0550 Topoisomerase IA + Prom 27179 - 27238 5.1 33 19 Op 1 . + CDS 27360 - 27527 74 ## SSU05_0951 DNA recombinase, putative 34 19 Op 2 . + CDS 27531 - 27857 199 ## SSU05_0951 DNA recombinase, putative 35 19 Op 3 . + CDS 27858 - 28274 475 ## SSU05_0952 recombinase 36 19 Op 4 . + CDS 28276 - 29838 612 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 29843 - 29905 14.3 + Prom 29900 - 29959 7.0 37 20 Op 1 . + CDS 29981 - 30205 232 ## SUB1185 putative DNA-binding protein 38 20 Op 2 . + CDS 30220 - 31089 509 ## SSU05_0955 hypothetical protein 39 20 Op 3 . + CDS 31070 - 31804 555 ## PROTEIN SUPPORTED gi|239830964|ref|ZP_04679293.1| Ribosomal protein L11 methyltransferase 40 20 Op 4 . + CDS 31837 - 32745 178 ## smi_1710 streptomycin aminoglycoside 6-adenyltransferase 41 20 Op 5 . + CDS 32742 - 32996 235 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 33176 - 33218 -0.3 + Prom 33210 - 33269 6.7 42 21 Tu 1 . + CDS 33315 - 34109 435 ## COG3231 Aminoglycoside phosphotransferase + Term 34119 - 34177 18.1 + Prom 34541 - 34600 8.3 43 22 Tu 1 . + CDS 34651 - 34725 112 ## + Term 34759 - 34826 30.2 + Prom 34727 - 34786 80.3 44 23 Op 1 . + CDS 34859 - 35596 334 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 45 23 Op 2 . + CDS 35601 - 35732 160 ## SPH_1419 hypothetical protein + Term 35787 - 35826 8.6 + Prom 35851 - 35910 9.4 46 24 Op 1 1/0.000 + CDS 35951 - 36505 626 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 47 24 Op 2 . + CDS 36509 - 39427 1425 ## COG4644 Transposase and inactivated derivatives, TnpA family + Term 39511 - 39550 -0.2 48 25 Op 1 . + CDS 39894 - 40124 198 ## EF_B0061 hypothetical protein 49 25 Op 2 . + CDS 40168 - 40326 86 ## gi|315036633|gb|EFT48565.1| conserved hypothetical protein 50 25 Op 3 . + CDS 40346 - 40561 143 ## EF_B0062 UvrC family transcriptional regulator + Prom 40566 - 40625 5.8 51 25 Op 4 . + CDS 40653 - 40739 106 ## + Term 40801 - 40837 1.7 Predicted protein(s) >gi|237663586|gb|GG668932.1| GENE 1 3 - 294 230 97 aa, chain - ## HITS:1 COG:no KEGG:EFA0031 NR:ns ## KEGG: EFA0031 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 97 1 97 781 188 98.0 8e-47 MNKKSLVKAVLLFLVGCFFVFTQTTAVNAEPKPDENKVIVTEPTTNVDTIYDTYKDNAFE LMTKEKKQDSWTGVEEAITNASATIKTFVWSMVKGLG >gi|237663586|gb|GG668932.1| GENE 2 312 - 647 375 111 aa, chain - ## HITS:1 COG:no KEGG:EFA0032 NR:ns ## KEGG: EFA0032 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 111 3 113 113 196 100.0 4e-49 MKKVLPFIALVGLLLLSGCGTDMKKILTADGGKWELENKSPTTTYTFFDDETFSRYNSKI SDSGTYSYDENNKKLTLDIKNKEQLIMENVEYKDGKLKGEIGGVEGTLIKK >gi|237663586|gb|GG668932.1| GENE 3 664 - 3156 1674 830 aa, chain - ## HITS:1 COG:no KEGG:EF0500 NR:ns ## KEGG: EF0500 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 830 1 830 830 1647 99.0 0 MPLKSKEPRLDFPIEAITNNFLFTTSNDVWVGYKLAHQVFPLNNLDFFKEYIEDGKGVFE QDTFDYHFMNIPEYFDLDEQIEATIDNLVKGSFADLGETYFRQAGDILKDEVQMNKYSTY LFIRFTAPIQVANPMEYIELFKEVGRKAINALTGVHVPVSQLYRAYQGLENKIYKDLSNF KNVERMDPRTIGRLFYYFFHRANTRLPERTLLPEEMTEGIIENNTGYMTIEQLDKTHYLA FLPLISLPTSMFGSAIIQNLQDSLSTTIETHVKVTFRHPDKDKRDVHKRRKRIYEQDKEQ TQVDGILDEDEVILFGEERLHELSKKIRSKERRLCRMTTTFVLSADSKQALEEKIKELEF VLDGTDYKLYRPLVDQLTLFNQCLIGAKSQFKSYEHVVSTGYVADLGMDLEKEIGNRYGM PLGRVITAKKFKSVQQALSLSSKIVWFFPNLTKKAIEGAQYTNGNTLIIGPPGQGKSVLV KYIFLWLTFLGQKILYIDPKNETVLFFKRALDKFGHIPEFKALYQRINFVSLSSEERYRG MLDPLLFLPREEAIQTARNVLENFGEVTTDSHTASDKKTLILDSVNAVMKGKGKKHLTKV IEVIREKDPKLANLISGHNVGLGKILLGNDYSEPIRFENQINVLGTQGLKIPTQAEIDSG RLNNEQIAGMSIMEVIMKMTTIFSTDKTEDAAIIFDEAKGFEDTAQGRFLIEGSLRQGRA NMTDIYLVTQAFMDYDKEDKKELLSYKFAFRPNQKEAQKKVLEFFGMDTNPANLQLINEL KSGTCLFQDHRGRSQPIAIDVLFDSWLMAVSSTNKEDEATQMALAMEQGS >gi|237663586|gb|GG668932.1| GENE 4 4061 - 4891 536 276 aa, chain - ## HITS:1 COG:CAC0501 KEGG:ns NR:ns ## COG: CAC0501 COG1968 # Protein_GI_number: 15893792 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Clostridium acetobutylicum # 3 272 1 269 274 272 60.0 6e-73 MVLDFIEILKVIFLGIVEGITEWLPISSTGHMILADKFITLNMSEAFKEMFFVVIQLGAI LAVVVMFWNKMFPFQLKDKSQPLVKKDTFSLWFKVAVACIPSGIMGILFDDYLDAYLQTP IVISIMLIFYGLLFILIENWNKKRTPTTMALSDISYKTAILIGAFQVLSLIPGTSRSGAT IIGALLIGVSRVAAAEFTFFLAVPTMLGASAFKLLKFGFDFTSAELLALVLGMAVAFAVS VLVIKFLMNFIKKHDFKVFGWYRIVLGILVVLITVM >gi|237663586|gb|GG668932.1| GENE 5 4891 - 5187 153 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|331082743|ref|ZP_08331866.1| ## NR: gi|331082743|ref|ZP_08331866.1| hypothetical protein HMPREF0992_00790 [Lachnospiraceae bacterium 6_1_63FAA] hypothetical protein HMPREF0992_00790 [Lachnospiraceae bacterium 6_1_63FAA] # 1 98 152 249 249 168 98.0 2e-40 MFGSILMFLTVSPFVFVAMKTKGFVAPMIGSAVIVMGSAALSNQEWGALYPWTATYFLVQ GKLQSTGYPTLLSVSIIILVSAVGFLMTFHHFKKEDLK >gi|237663586|gb|GG668932.1| GENE 6 5633 - 6550 222 305 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 299 1 301 305 90 26 2e-17 MDYIIETENLTKRYGTATVVDKVNLHVPTGKIYGLLGRNGAGKTTAMKMMLQLALPTDGT VRLFGTNYKENIHTLYSKVGSIIETPGFYSNLTGYENLQILAKLRGGVSKSGVEKALEVV GLHKEKRKVFSDYSLGMKQRLGIAAAIMHEPELLILDEPINGLDPIGIVEIRSLLSELSH NHGITIFISSHVLSEIEQIADIIGVMHEGHLVEEVNISELHKRNRKYIQFDLSDSEIAGK ILESHYHMTDFTVQDGTVRIYDFSQSVGEINREFARNGLLVTRIDDSEENLEDYFSKLIG GGGIA >gi|237663586|gb|GG668932.1| GENE 7 6733 - 7347 132 204 aa, chain - ## HITS:1 COG:L12334 KEGG:ns NR:ns ## COG: L12334 COG1396 # Protein_GI_number: 15671989 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 1 99 1 98 107 67 33.0 1e-11 MEFNEKLQQLRTGKNLTQEQLAEQLYVSRTAISKWESGKGYPNIESLKCISKFFSVTIDE LLSGEELITLAETENRSNLKKIYNYIYGILDMMAVAFIFLPLYGNSVGGYVYAVNLLSFT ATTPFNLAVYWSAFAALIVIGIAKIILTHLDKETWGGIATKCSLGLTALAICFLAAAREP YITALMFLLFVAKIVVWIKQNGTK >gi|237663586|gb|GG668932.1| GENE 8 7337 - 7534 172 65 aa, chain - ## HITS:1 COG:no KEGG:CLK_0105 NR:ns ## KEGG: CLK_0105 # Name: not_defined # Def: transposase and inactivated derivatives # Organism: C.botulinum_A3_LochMaree # Pathway: not_defined # 1 61 119 178 182 89 65.0 5e-17 MDYISVKAASEKWGISERRIQKLCEENRIDGTEKFGRAWMIPKDAEKPVDGRMKTRNKQE ENHGI >gi|237663586|gb|GG668932.1| GENE 9 7700 - 7840 164 46 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|307287457|ref|ZP_07567509.1| ## NR: gi|307287457|ref|ZP_07567509.1| helix-turn-helix protein [Enterococcus faecalis TX0109] helix-turn-helix protein [Enterococcus faecalis TX0109] # 1 43 1 43 119 88 100.0 1e-16 MYQDERKLDFKPLGIAIKKAREAKGWTQEYLAQLVDLTPRSIMLAS >gi|237663586|gb|GG668932.1| GENE 10 8668 - 8826 119 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518259|ref|ZP_03948308.1| ## NR: gi|227518259|ref|ZP_03948308.1| hypothetical protein HMPREF0348_1242 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_1242 [Enterococcus faecalis TX0104] # 1 52 11 62 62 98 100.0 1e-19 MKDGVYLGEDVDQAHAQGLIDQLNAIHYPKPQTNPIKIKGSVAKFFNKVNLV >gi|237663586|gb|GG668932.1| GENE 11 8861 - 9541 599 226 aa, chain + ## HITS:1 COG:pli0028 KEGG:ns NR:ns ## COG: pli0028 COG3316 # Protein_GI_number: 18450311 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Listeria innocua # 1 226 1 226 226 389 89.0 1e-108 MNHFKGKQFQKDVIIVAVGYYLRYNLSYREVQEILYDRGIEVCHTTIYRWVQEYGRVLYQ IWKKKNRQSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRNAQAAYAFLKRL FKQFREPKVLVTDKAPSIACAFKKLQNHGFYQQTEHRTVKYLNNLIEQDHRPIKRRNKFY QSLRTASTTIKGMEAIRGLYKKSRKEGTLFGFSVCIEIKVLLGIPA >gi|237663586|gb|GG668932.1| GENE 12 9582 - 10511 1026 309 aa, chain + ## HITS:1 COG:lin2838_1 KEGG:ns NR:ns ## COG: lin2838_1 COG1705 # Protein_GI_number: 16801898 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Listeria innocua # 17 174 152 309 340 157 53.0 3e-38 MQQNPYDGDFYFEKDESVEQFIQKIGEAARKVGQENDLYASVMIAQAILESASGQSLLSK APNYNLFGIKGTYNDRGISFATQEDLGNGLYYATQATFKQYPNYDESLKDYAKLLKEGIS GDANFYEGVWKNNAKTYQEATHYLTGRYATDSQYDKKLNGLIETYELTMYDRSKATVEMS NSDFPAYNGENYDTFNSYAWGNCTQYVYNRITQLGKHIDLTMGNGKDWGSTGQVRGYEVS RTPQAGTAVSFPAGVLGADPLYGHVAFVEKVNQDGSIFISEMNVQGLNIVSTRTISANQT SLLSYITPK >gi|237663586|gb|GG668932.1| GENE 13 10991 - 11695 882 234 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518262|ref|ZP_03948311.1| ## NR: gi|227518262|ref|ZP_03948311.1| hypothetical protein HMPREF0348_1245 [Enterococcus faecalis TX0104] hypothetical protein HMPREF9377_02511 [Enterococcus faecalis R712] hypothetical protein HMPREF9376_02234 [Enterococcus faecalis S613] hypothetical protein HMPREF9492_01112 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_02701 [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF0348_1245 [Enterococcus faecalis TX0104] hypothetical protein HMPREF9377_02511 [Enterococcus faecalis R712] hypothetical protein HMPREF9376_02234 [Enterococcus faecalis S613] hypothetical protein HMPREF9492_01112 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_02701 [Enterococcus faecalis DAPTO 516] # 1 234 1 234 234 356 100.0 8e-97 MKSIRLLGATLLASTTLLGAASAFAAPSDPSTPAPASAQTPVSAELTVNQTPTQPVPPLV PEGGTDTGTGITGLFGIAYAPNALQGSAQLKESGETEVILTSTGNTTKKYNVGVQDKTRA KDRNWTLSAQLEWTGANKDYMNGATIKATGGNVQLNEAGNLSALADAEVTTAAADLTIGN QAPVEIMAAQKGKTINGVYNYQFQEPKLVIPQSQNVTAGSYSGNINWTLSNVVE >gi|237663586|gb|GG668932.1| GENE 14 12072 - 13100 1034 342 aa, chain + ## HITS:1 COG:no KEGG:EF2253 NR:ns ## KEGG: EF2253 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 25 339 28 343 349 170 31.0 1e-40 MKKWALYSMCILSLFAGGYHAQAEESDSSQLAGGYTIEGIPSDHQLDKTVSYFYLKENPG EKDQVKVKLTNDSDKEKTLEVKLTNANTNSNGAVDYTGKIKDHASLKDPLTSMAKVSQKE VQVPAKSSVETAIDIQMPEKTMSGVVVGGIVVSEKQTVEKEKQALSLGNIYTYTIGLVLT NEDTVEPKKNNSVELDTVGAKLSDGKKIVQADILNPNPYIFPNATVKGEIKPKASGEVIK KEEKKNVNIAPYSVYPFQFDWKKEELKPGKYVFVGSVDAGGKTWKFEREFEITDEKAKEI NTKSVFKVYIPKWVTYGVYALVIISVGGTIYIVVRRKQREAE >gi|237663586|gb|GG668932.1| GENE 15 13103 - 13483 511 126 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518264|ref|ZP_03948313.1| ## NR: gi|227518264|ref|ZP_03948313.1| hypothetical protein HMPREF0348_1247 [Enterococcus faecalis TX0104] putative LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis R712] putative LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis S613] LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis DAPTO 512] LPXTG-motif cell wall anchor domain protein [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF0348_1247 [Enterococcus faecalis TX0104] putative LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis R712] putative LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis S613] LPXTG-motif protein cell wall anchor domain protein [Enterococcus faecalis DAPTO 512] LPXTG-motif cell wall anchor domain protein [Enterococcus faecalis DAPTO 516] # 1 126 1 126 126 212 100.0 6e-54 MKKWLIGGLLCSTLLMGGVAHAAEQPSTDVAQTGVTVQLARTIGPDKLPGGEPLGGAGGS NTTIHTDSNANANAQVHLAIGGSTAGRLPHTNGEKNLMYSILGGVFLGCSLCLLLIRKNK EKEVEE >gi|237663586|gb|GG668932.1| GENE 16 13483 - 13692 229 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518265|ref|ZP_03948314.1| ## NR: gi|227518265|ref|ZP_03948314.1| hypothetical protein HMPREF0348_1248 [Enterococcus faecalis TX0104] NADH-ubiquinone oxidoreductase chain 4L [Enterococcus faecalis R712] NADH-ubiquinone oxidoreductase chain 4L [Enterococcus faecalis S613] hypothetical protein HMPREF9492_01115 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_02704 [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF0348_1248 [Enterococcus faecalis TX0104] NADH-ubiquinone oxidoreductase chain 4L [Enterococcus faecalis R712] NADH-ubiquinone oxidoreductase chain 4L [Enterococcus faecalis S613] hypothetical protein HMPREF9492_01115 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_02704 [Enterococcus faecalis DAPTO 516] # 1 69 1 69 69 75 100.0 9e-13 MYSLPICLLVVGILLLIVNSLLFFNDYKATLTNSMKKSRLYVNGIVLLSSVGVIVLSTVY IFMINSQLS >gi|237663586|gb|GG668932.1| GENE 17 13815 - 14534 633 239 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518266|ref|ZP_03948315.1| ## NR: gi|227518266|ref|ZP_03948315.1| hypothetical protein HMPREF0348_1249 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_1249 [Enterococcus faecalis TX0104] # 1 237 1 237 237 345 100.0 1e-93 MKRKKYAYLFATTVLLANVATTPITVIAETMQENSSSEVAEKAEKQEKNQEEPLNSSEQD TSESDNETAEYTNNTQQQEDSSTPIEQAPSQPNNNESTQDNTKIESDLEKEIVETSDDLK EAKVQDWKVEENDDYVLLVRYEGDNKNLVVPNEINGKPTKLKGINEGVIPNLKSLEGFTV RPSTTGQMVGLDNTSLVGAFSGSTIVSINLSGLDTSQVTDMTNMFSSCSKLTSLDLSTS >gi|237663586|gb|GG668932.1| GENE 18 15077 - 16501 845 474 aa, chain + ## HITS:1 COG:no KEGG:Corgl_0616 NR:ns ## KEGG: Corgl_0616 # Name: not_defined # Def: lipoprotein # Organism: C.glomerans # Pathway: not_defined # 1 176 354 527 863 187 56.0 6e-46 MNVSNFDTSAVLNMSAMFANCSGLTSLNVSNFDTSAVTQMNGMFTGCSGLTSLNVSNFDT SAVTNMHSMFKGCSGLTSLNVSSVSFKTDKVTEMTDMFAGCSGLTSLDVSRFNTSEVKSM DGMFSDCTGLKSLDLSSFNTGKVTKMTYMFAYCNSLTYLDLSNFDMSQVSQMDVMFLADE ELPLLVKTNDSKLLSYDYSADLRYPGGPKFEANGGSFSPDSKEETKYYFEKCAVPVDSPK FALATFNEFRNNLKPTKEGNVFSRWKVTSGSEPVNDEQLLSPVTYMAQWRTGETGGVNIP SQDVDNTKPGEISSYGIAYMPKQFQTNRTVLNDAGPQSIPVNKTERFDVGVQDLRNTTSQ WTLKAQLMWDGGKELPGSSIKTTNKTGVVMKNINNGTDPFNPDMDLTDSNNEVQGESDVT ITNVPTLIMTANNVSHNAVYNYNLGDVSLEIPETRMIQPGSYEGHVEWNLANTL >gi|237663586|gb|GG668932.1| GENE 19 16702 - 17028 354 108 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518268|ref|ZP_03948317.1| ## NR: gi|227518268|ref|ZP_03948317.1| hypothetical protein HMPREF0348_1251 [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] conserved domain protein [Enterococcus faecalis DAPTO 512] conserved domain protein [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF0348_1251 [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] conserved domain protein [Enterococcus faecalis DAPTO 512] conserved domain protein [Enterococcus faecalis DAPTO 516] # 1 108 1 108 108 162 100.0 1e-38 MINAQKIQDEKIMQDKKKIKEKRTELLYLMALDDEWYRDETSELYNKIMICSEELRKLTS DKRKIRRMSQEEYMRLRKLGFTLNEIADYYGVSASYLNSWRQKKEITF >gi|237663586|gb|GG668932.1| GENE 20 17907 - 18065 107 52 aa, chain - ## HITS:1 COG:SP0276 KEGG:ns NR:ns ## COG: SP0276 COG3041 # Protein_GI_number: 15900210 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 2 51 41 92 92 65 55.0 2e-11 MPLKYKDHALTGNYIGTRECHIEPDWLLIYKIDGDKLILTLARIGSHSELFR >gi|237663586|gb|GG668932.1| GENE 21 18322 - 18441 184 39 aa, chain - ## HITS:1 COG:no KEGG:EF0512 NR:ns ## KEGG: EF0512 # Name: not_defined # Def: DNA-damage-inducible protein J, putative # Organism: E.faecalis # Pathway: not_defined # 1 39 1 39 88 68 100.0 9e-11 MATTKKKPIHVNVDENLKEEAEQLFDDLGLNMTSAITIF >gi|237663586|gb|GG668932.1| GENE 22 19154 - 19756 518 200 aa, chain - ## HITS:1 COG:NMA0004 KEGG:ns NR:ns ## COG: NMA0004 COG2184 # Protein_GI_number: 15793038 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Neisseria meningitidis Z2491 # 14 192 11 188 191 216 59.0 2e-56 MLENKLGIINQLELNRIEERVSKEKAKQLYDSGDIDRVEIGTFKGLSYIHNYLFEDIYEF AGKVRSQNISKGNFRFAPVMYLEVALEHIDKMPQRNLDEIVAKYVEMNIAHPFREGNGRA TRIWLDLILKKELKQVVDWNLINKEDYLSAMERNPVNDLEIKYLISNSLTNRINDREIFM KGIDISYYYEGYTEYNIEDL >gi|237663586|gb|GG668932.1| GENE 23 20003 - 20941 343 312 aa, chain - ## HITS:1 COG:no KEGG:Galf_1231 NR:ns ## KEGG: Galf_1231 # Name: not_defined # Def: hypothetical protein # Organism: G.capsiferriformans # Pathway: not_defined # 2 289 6 296 323 79 22.0 3e-13 MNLRKIEHEIEEILSKDTHSWVRLYELIREVEYSKLWRNEYSSFTQWIKHLAYVTGVTES LIWKRKKAGEIYFDYQQRARSRGFSVPNIEDVEVSPDNFELVEKISQGNSQIKDELMQQV LVKDIKRSDLVNTWSTIKTIQAKEGGGIVKKNRYSKIDSSDEQIFTISDFSFALSESSWL QIAKNSYHKGKSVYRLIPNFSFYSSLLMRSVTLDFLLLENVSSKYTQELNTHSIEIVFSD NKLNNIILNTKTNYSWVVVPEDISLIALKQLPKEIGLLKISSKRIIQVVRNAALTNETSK LDILQAFIVKTI >gi|237663586|gb|GG668932.1| GENE 24 21053 - 21394 256 113 aa, chain - ## HITS:1 COG:DR0417 KEGG:ns NR:ns ## COG: DR0417 COG2337 # Protein_GI_number: 15805444 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Deinococcus radiodurans # 7 105 5 103 117 77 36.0 7e-15 MSDEKKYIPKKGDIVWIDFDPSAGKEIQKRRPGLVVSRYEFNRKTMFAVICPITSTIKNM PTRYTLPDEMETHGQVVISQLKSLDFTERKLSQIEHLPLKDMAKIDQIIEYIF >gi|237663586|gb|GG668932.1| GENE 25 21394 - 21624 275 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227518274|ref|ZP_03948323.1| ## NR: gi|227518274|ref|ZP_03948323.1| antitoxin MazE [Enterococcus faecalis TX0104] transcriptional regulator [Enterococcus faecalis AR01/DG] conserved domain protein [Enterococcus faecalis R712] conserved domain protein [Enterococcus faecalis S613] toxin-antitoxin system, antitoxin component, AbrB family [Enterococcus faecalis DAPTO 512] toxin-antitoxin system, antitoxin component, AbrB family [Enterococcus faecalis DAPTO 516] antitoxin MazE [Enterococcus faecalis TX0104] transcriptional regulator [Enterococcus faecalis ARO1/DG] conserved domain protein [Enterococcus faecalis R712] conserved domain protein [Enterococcus faecalis S613] toxin-antitoxin system, antitoxin component, AbrB family [Enterococcus faecalis DAPTO 512] toxin-antitoxin system, antitoxin component, AbrB family [Enterococcus faecalis DAPTO 516] # 1 76 1 76 76 140 100.0 3e-32 MLTTKSRKQGSSVVLTLPSNNGQKPKADQEYIVMYSDDGTITLVPKLQDPFSGGSEGEYY EKDEWYDIEPGGRELF >gi|237663586|gb|GG668932.1| GENE 26 21854 - 22459 557 201 aa, chain + ## HITS:1 COG:NMA0004 KEGG:ns NR:ns ## COG: NMA0004 COG2184 # Protein_GI_number: 15793038 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Neisseria meningitidis Z2491 # 1 195 1 190 191 219 56.0 2e-57 MILENKLGLTNQVELAKVEEKLSKQKAKELYDCGKINEIEVGTFKGLSEIHEFLFSDIYD FAGKIRSVNIAKGNFRFAPVMYLEHSLQHIDQMPQTSFEEIIKKYVEMNIAHPFREGNGR STRIWLDLILKEELQKVVDWNLIDKADYLSAMERSPINDLEIRYLISNALTDKIDDRELY MKGIDVSYFYEGYSEYTIDDL >gi|237663586|gb|GG668932.1| GENE 27 22475 - 23047 414 190 aa, chain + ## HITS:1 COG:pinQ KEGG:ns NR:ns ## COG: pinQ COG1961 # Protein_GI_number: 16129504 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Escherichia coli K12 # 4 188 5 192 196 99 34.0 3e-21 MTKYGYARVSTASQSTKEQIQQLLENGVEKKNIFSEKFTGTKRDRPKFNQLLAGLKPGDE IVVTKLDRFARNTREALEIIEPLLDDNVTIKVLNLGTIENTSMGRMVTRTLLSVAEMERD MIVERTQEGKMFARKNNPNFREGRPKATITPKKRHAYELLTSGKSYKEVEAITGFSRSTL FRIKKKIEES >gi|237663586|gb|GG668932.1| GENE 28 23480 - 24439 379 319 aa, chain - ## HITS:1 COG:BH2524 KEGG:ns NR:ns ## COG: BH2524 COG2826 # Protein_GI_number: 15615087 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS30 family # Organism: Bacillus halodurans # 1 306 1 306 314 121 31.0 2e-27 MTYTHLTTDELVMIESYYHQNIKIVKIAEYLKRSRTPIYNVINFLKEGHTALEYYQQYKE NKKRCGRRNIVLPKKQQSYIKEKIAQGWTPDVIIGRKEKPISCSVRTLYRQFKEKVFDES TLPMKGKRKPNGHQERRGKQAFKRNIVERETDYPTFKEEFGHIEGDTIVGIHHKSAVITL VERLSKIIITLKPEGRKAIDIENTLNHWFGSIPRHLFKSITFDCGKEFSNWKALSNQHDI AIYFADPGTPSQRALNENSNGLLRKDGLPKNMDFNQVDQAFISSVANKRNNIPRKSLDYQ TPLEVFMSYMNEDILSSLI >gi|237663586|gb|GG668932.1| GENE 29 24567 - 25247 764 226 aa, chain - ## HITS:1 COG:pli0028 KEGG:ns NR:ns ## COG: pli0028 COG3316 # Protein_GI_number: 18450311 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Listeria innocua # 1 226 1 226 226 418 100.0 1e-117 MNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQ IWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRL VKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFY RSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA >gi|237663586|gb|GG668932.1| GENE 30 25570 - 25740 252 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|115534809|ref|YP_783891.1| ## NR: gi|115534809|ref|YP_783891.1| hypothetical protein pRE25p07 [Enterococcus faecalis] hypothetical protein pVEF1_004 [Enterococcus faecium] hypothetical protein pVEF212 [Enterococcus faecium] hypothetical protein pLK0018_p02 [Lactococcus garvieae] hypothetical protein pIP816p16 [Enterococcus faecium] conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis T2] conserved hypothetical protein [Enterococcus faecalis JH1] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] conserved hypothetical protein [Enterococcus faecium E1071] conserved hypothetical protein [Enterococcus faecium E1679] hypothetical protein pWZ1668_p05 [Enterococcus faecalis] conserved hypothetical protein [Enterococcus faecalis TX0635] conserved hypothetical protein [Enterococcus faecalis DAPTO 512] conserved hypothetical protein [Enterococcus faecalis DAPTO 516] hypothetical protein pTW9_p61 [Enterococcus faecalis] hypothetical protein [Enterococcus faecalis] hypothetical protein [Enterococcus faecium] hypothetical protein [Enterococcus faecium] hypothetical protein [Lactococcus garvieae] hypothetical protein [Enterococcus faecium] conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis T2] conserved hypothetical protein [Enterococcus faecalis JH1] hypothetical protein [Enterococcus faecium] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] conserved hypothetical protein [Enterococcus faecium E1071] conserved hypothetical protein [Enterococcus faecium E1679] hypothetical protein [Enterococcus faecalis] hypothetical protein [Enterococcus faecalis] conserved hypothetical protein [Enterococcus faecalis] conserved hypothetical protein [Enterococcus faecalis DAPTO 512] conserved hypothetical protein [Enterococcus faecalis TX0635] conserved hypothetical protein [Enterococcus faecalis DAPTO 516] hypothetical protein [Enterococcus faecalis] conserved hypothetical protein [Staphylococcus pseudintermedius ED99] # 1 56 1 56 56 85 100.0 9e-16 MKKFIYRVLENDEVVAIFNEQQYAQDFIAYEKTISDKQFEIEKVDIADWLLQPREF >gi|237663586|gb|GG668932.1| GENE 31 25754 - 26356 600 200 aa, chain + ## HITS:1 COG:pli0059 KEGG:ns NR:ns ## COG: pli0059 COG1961 # Protein_GI_number: 18450341 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 3 188 2 197 199 104 38.0 1e-22 MAKIGYARVSSKEQNLDRQLKALEGVSKVFSDKLSGQSVERPQLQAMLNYIREGDIVVVT ELDRLGRNNKELTELMNQIQIKGATLEVLNLPSMNGIEDENLRRLINNLVIELYKYQAES ERKRIKERQAQGIEIAKKKGKFKGRQPKFKENDPRLQHAFDLFLNGCSDKEVEEQTGINR RTFRRYRSRYNVTVDQRKKQ >gi|237663586|gb|GG668932.1| GENE 32 26372 - 27064 524 230 aa, chain + ## HITS:1 COG:BH3387 KEGG:ns NR:ns ## COG: BH3387 COG0550 # Protein_GI_number: 15615949 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Bacillus halodurans # 2 226 3 226 721 171 41.0 9e-43 MSTVILAEKPSQALAYASALKQSTKKDGYFEIKDPLFTDETFITFGFGHLVELAEPGHYN EKWQNWKLESLPIFPDRYDFEVAKDKGKQFKIVAELLKKANTIIVATDSDREGENIAWSI IHKANAFSKDKTYKRLWINSLEKDVIRSGFQNLQPGMNYYPFYQEAQTRQIADWLIGMNA SPLYTLNLQQKGVQGTFSLGRVQTPTLYLIYQRQEAIENFKKEPFFLNNS >gi|237663586|gb|GG668932.1| GENE 33 27360 - 27527 74 55 aa, chain + ## HITS:1 COG:no KEGG:SSU05_0951 NR:ns ## KEGG: SSU05_0951 # Name: not_defined # Def: DNA recombinase, putative # Organism: S.suis_05ZYH33 # Pathway: not_defined # 1 55 1 55 165 94 100.0 1e-18 MLFLRDGEIKATLTTMMNKLAFSHKLILEPLFKSVSQIDEESDRERMDAIDKLME >gi|237663586|gb|GG668932.1| GENE 34 27531 - 27857 199 108 aa, chain + ## HITS:1 COG:no KEGG:SSU05_0951 NR:ns ## KEGG: SSU05_0951 # Name: not_defined # Def: DNA recombinase, putative # Organism: S.suis_05ZYH33 # Pathway: not_defined # 1 108 58 165 165 179 99.0 4e-44 MEERNTLIALMSKGFLEPALFNQERNVLDSEIKNLTTEKTNLVTNSASGVLRANEIKDLI NYVSADNFNGDYTEELFEEFVVNIIVNSRDELTFNLKCGLSLKEKVVR >gi|237663586|gb|GG668932.1| GENE 35 27858 - 28274 475 138 aa, chain + ## HITS:1 COG:no KEGG:SSU05_0952 NR:ns ## KEGG: SSU05_0952 # Name: not_defined # Def: recombinase # Organism: S.suis_05ZYH33 # Pathway: not_defined # 1 138 1 138 138 255 100.0 5e-67 MAYIPYGYKIQDGVVTVDEKAAGQVKVFFEKYISGLSLTVAGEQAGIEKTHSVMGRILKN VNYLGNDTYPAIIDKEIFDKAEEVRDKRAKDLGRVVELAAFTSPPPKERFKMKKADNKMP VDPFERAEYLYSLIESEE >gi|237663586|gb|GG668932.1| GENE 36 28276 - 29838 612 520 aa, chain + ## HITS:1 COG:SA0057 KEGG:ns NR:ns ## COG: SA0057 COG1961 # Protein_GI_number: 15925764 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Staphylococcus aureus N315 # 22 501 2 467 542 114 26.0 4e-25 MTEKNIMVIPARKRVGSTAAKEKIKKLRVAAYCRVSTETEEQNSSYEVQVSHYTEFIKKN NEWEFAGIFADDGISGTNTKKRDEFNRMIAECMDGNIDMVITKSISRFARNTLDCLQYIR QLKDKNISVYFEKENINTTDAKGEVLLTIMASLAQQESQSLSQNVKLGLQYRYQQGKVQV NHKRFMGYTKDEDGNLTIVPEEAEIIKRIYREYLEGQSLVGIGRALEKDGILTAAGKPRW RPESVKKILQNEKYIGDALLQKTVTVDFLTKKRVKNEGHVPQYYVENSHEAIIPKELFLQ AQEEIHRRSNIYTGEGKNKRIYSSKYALSAITFCGDCGDIYRRVYWNIHGRKEFVWRCVT RIEQGPEVCKNRTVKEDELYGAVMTAINKLLAGGNNMIKTLEENIHAVIGETTEYQISEI NNSLEEKQKELIKLANKGQDYDHLADEIDELRDKRQILLVEDASLSGENERINELIEFIR KNKFRTLEYDDKLVRKIIQSVTVYEGHFVIAFKSGIEMEI >gi|237663586|gb|GG668932.1| GENE 37 29981 - 30205 232 74 aa, chain + ## HITS:1 COG:no KEGG:SUB1185 NR:ns ## KEGG: SUB1185 # Name: not_defined # Def: putative DNA-binding protein # Organism: S.uberis # Pathway: not_defined # 1 74 1 74 74 125 98.0 4e-28 MTTAEMIKELCEQMNISVSELARRIGQTPQNFNKKLQRETVTLDELKAIADVLGVKFVQA FILPDGEEIKISNE >gi|237663586|gb|GG668932.1| GENE 38 30220 - 31089 509 289 aa, chain + ## HITS:1 COG:no KEGG:SSU05_0955 NR:ns ## KEGG: SSU05_0955 # Name: not_defined # Def: hypothetical protein # Organism: S.suis_05ZYH33 # Pathway: not_defined # 1 289 1 289 289 580 100.0 1e-164 MVGNVIQIVTEKLSSLPFIEGIVLGGSRARGTHTENSDIDIGIYYNSDSFDLTAINQIAT ELDDKNRNNLVVPPGAWGDWINGGGWLFINGYHVDLILRDIKRVEQIIKDTEQGIVTANY QTGHPHGYISAMYRGELAISKILYAKNESLCELKKQAEIYPTALKKSLMNFFIFEAEFSL MFVKANAGVEDKYYIAGHVFRIISCLNQVLFACNNAYCINEKKAIKLLETFEYKPEKYAE RVNHIFEVLGLSLFECYDMTEKLYKEVNEIVSEINNFLNEESSDERKQI >gi|237663586|gb|GG668932.1| GENE 39 31070 - 31804 555 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239830964|ref|ZP_04679293.1| Ribosomal protein L11 methyltransferase [Ochrobactrum intermedium LMG 3301] # 1 243 1 243 245 218 44 5e-56 MKENKYDDNIFFQKYSQMSRSQKGLAGAGEWETLKKMLPDFKGKRVLDLGCGYGWHCIYA MENGASSVVGVDISHKMLEVAKGKTHFPQIEYECCAIEDVDFPEESFDVILSSLAFHYVA DYENLIKKIYRMLKAGGNLVFTVEHPVFTAHGTQDWYYNEKGEILHFPVDNYYYEGKRTA MFLEEKVTKYHRTLTTYLNTLLSNSFIINQIVEPQPPENMMDIPGMADEMRRPMMLIVSA KKKM >gi|237663586|gb|GG668932.1| GENE 40 31837 - 32745 178 302 aa, chain + ## HITS:1 COG:no KEGG:smi_1710 NR:ns ## KEGG: smi_1710 # Name: aadE # Def: streptomycin aminoglycoside 6-adenyltransferase # Organism: S.mitis_B6 # Pathway: not_defined # 1 302 1 302 302 564 93.0 1e-159 MRSEKEMMDLVLSLAEQDERIRIVTLEGSRANINIPKDEFQDYDITYFVSDIEPFISNDD WLNQFGNIIMMQKPEDMELFPPEEKGFSYLMLFDDYNKIDLTLLPLEELDNYLKGDKLIK VLIDKDCRIKRDIVPTDIDYHVRKPSAREYDDCCNEFWNVTPYVIKGLCRKEILFAIDHF NQIVRHELLRMISWKVGIETGFKLSVGKNYKFIERYISEDLWEKLLSTYRMDSYENIWEA LFLCHQLFRAVSGEVAERLHYAYPEYDRNITKYTRDMYKKYTGKTGCLDSTYAADIEERR EQ >gi|237663586|gb|GG668932.1| GENE 41 32742 - 32996 235 84 aa, chain + ## HITS:1 COG:BS_yyaR KEGG:ns NR:ns ## COG: BS_yyaR COG0454 # Protein_GI_number: 16081126 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Bacillus subtilis # 1 69 1 74 173 62 41.0 2e-10 MITEMKAGHLKDIDKPSEPFEVIGKIIPRYENENWTFTELLYEAPYLKSYQDEEDEEDEE ADCLEYIDNTDKIIYLLYRRYRRM >gi|237663586|gb|GG668932.1| GENE 42 33315 - 34109 435 264 aa, chain + ## HITS:1 COG:DR0066 KEGG:ns NR:ns ## COG: DR0066 COG3231 # Protein_GI_number: 15805107 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aminoglycoside phosphotransferase # Organism: Deinococcus radiodurans # 1 264 7 263 263 122 32.0 7e-28 MAKMRISPELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVERE KDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIR LFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKP EEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIAFCVRSIREDIGEEQYVEL FFDLLGIKPDWEKIKYYILLDELF >gi|237663586|gb|GG668932.1| GENE 43 34651 - 34725 112 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLVFQMRNVDKTSTVLKQTKNLAS >gi|237663586|gb|GG668932.1| GENE 44 34859 - 35596 334 245 aa, chain + ## HITS:1 COG:NMB0066 KEGG:ns NR:ns ## COG: NMB0066 COG0030 # Protein_GI_number: 15676003 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Neisseria meningitidis MC58 # 3 242 4 243 244 224 50.0 8e-59 MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELD SHLFNLSSEKLKLNIRVTLIHQDILQFQFPNKQRYKIVGNIPYHLSTQIIKKVVFESHAS DIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTT DVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNNLSTVTYEQVLSIFNSYLL FNGRK >gi|237663586|gb|GG668932.1| GENE 45 35601 - 35732 160 43 aa, chain + ## HITS:1 COG:no KEGG:SPH_1419 NR:ns ## KEGG: SPH_1419 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 43 21 63 63 68 90.0 6e-11 MSRFCKFGKLHVTKGNVDKLLGILLTASKELKRSLAPTGNLYR >gi|237663586|gb|GG668932.1| GENE 46 35951 - 36505 626 184 aa, chain + ## HITS:1 COG:XF2028 KEGG:ns NR:ns ## COG: XF2028 COG1961 # Protein_GI_number: 15838622 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Xylella fastidiosa 9a5c # 1 165 1 155 185 160 50.0 1e-39 MIFGYARVSTDDQNLSLQIDALTHYGIDKLFQEKVTGAKKDRPQLEEMINLLREGDSVVI YKLDRISRSTKHLIELSELFEELSVNFISIQDNVDTSTSMGRFFFRVMASLAELERDIII ERTNSGLKAARVRGKKGGRPSKGKLSIDLALKMYDSKEYSIRQILDASKLSKTTFYRYLN KRNA >gi|237663586|gb|GG668932.1| GENE 47 36509 - 39427 1425 972 aa, chain + ## HITS:1 COG:CAP0093 KEGG:ns NR:ns ## COG: CAP0093 COG4644 # Protein_GI_number: 15004797 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, TnpA family # Organism: Clostridium acetobutylicum # 317 956 1 654 673 545 43.0 1e-154 MAMKRILTTSQREQLLSVDHLSEEDFKAYFSFSDYDLEVINQHRGKVNKLGFAIQLCLAR YPGCSLSNWPIKSTRLTSYVSRQLHLDAIDLNSYDHRNTRANHFNEILEVFNYHRFGSAN TQKQLIEYLIELALENDDSIYLMKKTIDFLTRKRIIFPSIATLEDIISRCRDKAENNLFS ILLCSLTDIQIEKLESLFQIYEETKITKLAWLKDIPGKANPESFMSICKKVEVIASMGLG TINVSHINRNRFLQLARLGENYDAYDFSRFELEKRYSLLIAFLVNHHQYLIDQLIEINDR ILASIKRKGTRDSQEQLKEKGKLATKKLEHYASLIDALHFAKDNDSNPFDEIERIMPWED LVQDGEEAKKITGNKNHGYLEMVRNKANYLRRYTPMLLRTLSFKATPAANPVLMALTQLT DLHNSGKRKIPADTSTDFVSKKWKSLVRPEEGKIDRSYYELVAFTELKNNIRSGDISVEG SMIHRNIDDYLVDLSACIDSETIPDTFEDYLKDREIILDLQLQFYSTVDKRISRANLKKL EKVTPSEAEIYRKKLYSIIPKIRLSDLLIEVDSWTNFSQEFSHDSTGKPPSEQERKIIFA ALLGLGMNIGLEKMAQSTPGISYSQLANAKQWRFYKEALTRAQSVLVNYQLKLPVADFWG EGKTTASDGMRVPVGVSALKSDVNPHYKSMEKGATMIRSINDRHTTHHIEVASTNTREAT HTLDGLLYHETDLDIEEHFTDTNGYSDQVFGMTALLGFDFEPRIRNIKKSQLFSIKSPSY YPNLSEDISGKINVKIIEENYDEIKRIAYSIQTGKVSSSLLLGKLGSYARKNRVALALRE LGRIEKSIFMIDYITDSELRRRITHGLNKTEAINALARELFFGRRGKFMERDIRRQLQSA SALNVLINAISIWNAVYLQAAYNYLVKIDPEVTKYMKHVSPINWEHITFLGEYKFDLLSI PKHLRELNIKNK >gi|237663586|gb|GG668932.1| GENE 48 39894 - 40124 198 76 aa, chain + ## HITS:1 COG:no KEGG:EF_B0061 NR:ns ## KEGG: EF_B0061 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 2 70 1 69 168 120 84.0 1e-26 MVRRTKKEFKPYNDYVDRPFELKWPTAFPLGELQAAIKETNDYHSREIERLPQQSQAKIE HLLSRSIKQNSAEFLR >gi|237663586|gb|GG668932.1| GENE 49 40168 - 40326 86 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|315036633|gb|EFT48565.1| ## NR: gi|315036633|gb|EFT48565.1| conserved hypothetical protein [Enterococcus faecalis TX0027] # 1 52 97 148 172 98 100.0 1e-19 MAEFDVVLIGDQQIDFYDIRHIQIHDFYKWSENEPEKPIDNPFSEVKFSELT >gi|237663586|gb|GG668932.1| GENE 50 40346 - 40561 143 71 aa, chain + ## HITS:1 COG:no KEGG:EF_B0062 NR:ns ## KEGG: EF_B0062 # Name: not_defined # Def: UvrC family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 9 69 1 61 67 76 62.0 3e-13 MLLSMNITVTEIFMKTYDYRGSVIKEGNKTTSIAYVQCACGCLASRMSSNSDKYKCSWCK RTYMLGKEIYR >gi|237663586|gb|GG668932.1| GENE 51 40653 - 40739 106 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAEKLISLIIAPLLVGLVLLLVDRWLDD Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:19:37 2011 Seq name: gi|237663585|gb|GG668933.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD12, whole genome shotgun sequence Length of sequence - 104751 bp Number of predicted genes - 105, with homology - 97 Number of transcription units - 53, operones - 30 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 784 822 ## COG1801 Uncharacterized conserved protein 2 1 Op 2 . + CDS 801 - 1337 545 ## COG4696 Uncharacterized protein conserved in bacteria - Term 1317 - 1352 6.0 3 2 Tu 1 . - CDS 1360 - 2712 1521 ## COG0527 Aspartokinases - Prom 2743 - 2802 5.3 + Prom 2810 - 2869 7.1 4 3 Tu 1 . + CDS 2899 - 3585 789 ## COG0637 Predicted phosphatase/phosphohexomutase + Prom 3601 - 3660 9.2 5 4 Op 1 3/0.000 + CDS 3771 - 5507 1994 ## COG4477 Negative regulator of septation ring formation + Term 5524 - 5563 8.4 + Prom 5549 - 5608 6.0 6 4 Op 2 . + CDS 5633 - 6778 1154 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes + Term 6788 - 6831 12.6 - Term 6770 - 6826 16.7 7 5 Op 1 40/0.000 - CDS 6832 - 7524 659 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 8 5 Op 2 . - CDS 7521 - 9002 1366 ## COG0642 Signal transduction histidine kinase - Prom 9124 - 9183 9.6 + Prom 9055 - 9114 9.0 9 6 Op 1 . + CDS 9188 - 10165 1224 ## EF0374 putative lipoprotein + Term 10185 - 10239 8.5 + Prom 10201 - 10260 8.4 10 6 Op 2 . + CDS 10350 - 11315 1204 ## EF0375 hypothetical protein + Term 11334 - 11380 13.2 + Prom 11382 - 11441 4.9 11 7 Op 1 . + CDS 11489 - 12292 986 ## COG0666 FOG: Ankyrin repeat 12 7 Op 2 1/0.059 + CDS 12344 - 12892 741 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases + Term 12893 - 12945 19.4 + Prom 12894 - 12953 40.7 13 8 Tu 1 . + CDS 13008 - 13373 417 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases + Term 13374 - 13419 4.6 - Term 13357 - 13410 12.1 14 9 Op 1 . - CDS 13414 - 14226 731 ## COG0657 Esterase/lipase 15 9 Op 2 . - CDS 14201 - 15793 1072 ## COG2508 Regulator of polyketide synthase expression - Prom 15819 - 15878 6.1 + Prom 15794 - 15853 6.7 16 10 Op 1 . + CDS 15916 - 18927 3772 ## COG0074 Succinyl-CoA synthetase, alpha subunit 17 10 Op 2 . + CDS 18920 - 19753 675 ## EF0384 hypothetical protein 18 10 Op 3 1/0.059 + CDS 19763 - 21016 1464 ## COG0477 Permeases of the major facilitator superfamily + Prom 21042 - 21101 2.2 19 11 Op 1 . + CDS 21151 - 22089 1226 ## COG0549 Carbamate kinase 20 11 Op 2 . + CDS 22096 - 23316 1115 ## COG1301 Na+/H+-dicarboxylate symporters + Prom 23319 - 23378 2.1 21 12 Op 1 . + CDS 23406 - 24467 1368 ## COG2055 Malate/L-lactate dehydrogenases + Term 24468 - 24520 1.1 22 12 Op 2 . + CDS 24533 - 25888 1771 ## EF0389 hypothetical protein 23 12 Op 3 . + CDS 25913 - 27136 1847 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases + Term 27152 - 27200 14.3 - Term 27139 - 27188 9.1 24 13 Tu 1 . - CDS 27276 - 28787 1005 ## LM5578_0478 hypothetical protein - Prom 28820 - 28879 11.4 25 14 Tu 1 . + CDS 28979 - 30997 1656 ## LKI_08020 hypothetical protein 26 15 Tu 1 . + CDS 31424 - 32809 1696 ## COG3883 Uncharacterized protein conserved in bacteria + Term 32835 - 32870 5.1 + Prom 33137 - 33196 10.3 27 16 Tu 1 . + CDS 33217 - 34344 1452 ## COG0620 Methionine synthase II (cobalamin-independent) + Term 34504 - 34570 31.6 - Term 34338 - 34404 30.0 28 17 Op 1 . - CDS 34565 - 35749 1196 ## COG0628 Predicted permease 29 17 Op 2 . - CDS 35765 - 36280 509 ## EF0397 hypothetical protein - Prom 36305 - 36364 5.6 + Prom 36065 - 36124 9.7 30 18 Op 1 . + CDS 36357 - 36458 109 ## 31 18 Op 2 6/0.000 + CDS 36473 - 37159 758 ## COG3819 Predicted membrane protein 32 18 Op 3 3/0.000 + CDS 37156 - 38100 1103 ## COG3817 Predicted membrane protein 33 18 Op 4 . + CDS 38116 - 38757 866 ## COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) + Term 38765 - 38801 5.1 34 18 Op 5 . + CDS 38824 - 38913 69 ## + Term 39052 - 39100 13.4 + Prom 38946 - 39005 5.9 35 19 Tu 1 . + CDS 39201 - 40604 1688 ## COG1757 Na+/H+ antiporter + Term 40616 - 40676 10.1 + Prom 40659 - 40718 4.2 36 20 Op 1 1/0.059 + CDS 40756 - 41190 515 ## COG1846 Transcriptional regulators 37 20 Op 2 . + CDS 41195 - 41830 851 ## COG0778 Nitroreductase 38 21 Tu 1 . - CDS 41873 - 42706 589 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 42794 - 42853 11.4 + Prom 42783 - 42842 6.1 39 22 Op 1 4/0.000 + CDS 42890 - 44638 1356 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component 40 22 Op 2 5/0.000 + CDS 44629 - 46662 1759 ## COG3711 Transcriptional antiterminator 41 22 Op 3 . + CDS 46673 - 47107 473 ## COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain + Term 47301 - 47356 6.1 - Term 47300 - 47335 4.3 42 23 Tu 1 . - CDS 47377 - 47472 143 ## + Prom 47487 - 47546 5.9 43 24 Op 1 . + CDS 47718 - 49490 2293 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component 44 24 Op 2 15/0.000 + CDS 49505 - 49942 536 ## COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain 45 24 Op 3 . + CDS 49957 - 51111 1519 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases + Term 51158 - 51215 10.6 - Term 51109 - 51157 -0.8 46 25 Op 1 . - CDS 51180 - 52295 958 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Term 52326 - 52358 1.1 47 25 Op 2 . - CDS 52374 - 53012 448 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases - Prom 53036 - 53095 7.9 + Prom 53050 - 53109 9.9 48 26 Op 1 24/0.000 + CDS 53357 - 54511 1275 ## COG0845 Membrane-fusion protein 49 26 Op 2 36/0.000 + CDS 54524 - 55231 263 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 50 26 Op 3 . + CDS 55228 - 56457 273 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 + Term 56464 - 56517 4.4 51 27 Op 1 . - CDS 56512 - 57216 749 ## EF0419 hypothetical protein 52 27 Op 2 . - CDS 57216 - 58691 1738 ## COG0477 Permeases of the major facilitator superfamily - Prom 58733 - 58792 8.3 + Prom 58684 - 58743 10.3 53 28 Op 1 . + CDS 58834 - 59301 598 ## EF0421 MerR family transcriptional regulator + Prom 59353 - 59412 7.0 54 28 Op 2 . + CDS 59432 - 60184 927 ## COG1414 Transcriptional regulator + Term 60193 - 60248 16.2 + Prom 60233 - 60292 17.8 55 29 Op 1 8/0.000 + CDS 60345 - 60992 856 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 56 29 Op 2 . + CDS 60997 - 62004 956 ## COG0524 Sugar kinases, ribokinase family 57 29 Op 3 9/0.000 + CDS 62017 - 62856 1081 ## COG3717 5-keto 4-deoxyuronate isomerase 58 29 Op 4 . + CDS 62878 - 63666 200 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 63674 - 63720 15.4 - Term 63655 - 63717 18.4 59 30 Tu 1 . - CDS 63726 - 63926 326 ## EF0439 immunity protein PlnM, putative - Prom 63965 - 64024 5.5 - Term 63981 - 64020 5.2 60 31 Op 1 . - CDS 64032 - 65513 1451 ## COG3104 Dipeptide/tripeptide permease 61 31 Op 2 . - CDS 65506 - 65580 69 ## + Prom 66080 - 66139 7.7 62 32 Tu 1 . + CDS 66331 - 66930 881 ## EF0443 LysM domain-containing protein + Term 66976 - 67028 6.0 63 33 Tu 1 . - CDS 67000 - 67290 193 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism - Prom 67413 - 67472 11.4 + Prom 67417 - 67476 7.0 64 34 Op 1 2/0.000 + CDS 67545 - 68360 1093 ## COG0447 Dihydroxynaphthoic acid synthase 65 34 Op 2 . + CDS 68365 - 69822 1210 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 66 34 Op 3 10/0.000 + CDS 69819 - 71186 1364 ## COG1169 Isochorismate synthase 67 34 Op 4 15/0.000 + CDS 71186 - 72919 1612 ## COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 68 34 Op 5 3/0.000 + CDS 72907 - 73731 802 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 69 34 Op 6 . + CDS 73732 - 74835 1103 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily + Term 74837 - 74908 9.4 - Term 74835 - 74887 13.1 70 35 Tu 1 . - CDS 74892 - 75590 759 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase - Prom 75617 - 75676 7.2 - Term 75682 - 75726 14.4 71 36 Tu 1 . - CDS 75842 - 77368 1519 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - Prom 77420 - 77479 6.5 + Prom 77475 - 77534 8.3 72 37 Tu 1 . + CDS 77589 - 77990 522 ## COG1764 Predicted redox protein, regulator of disulfide bond formation + Term 77999 - 78041 11.1 - Term 77987 - 78029 11.1 73 38 Tu 1 . - CDS 78034 - 78813 586 ## COG0730 Predicted permeases - Prom 78919 - 78978 9.1 + Prom 78878 - 78937 6.9 74 39 Op 1 13/0.000 + CDS 78974 - 79777 981 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 75 39 Op 2 1/0.059 + CDS 79770 - 80588 1010 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 76 39 Op 3 . + CDS 80619 - 81095 693 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 77 39 Op 4 2/0.000 + CDS 81112 - 81963 594 ## COG1737 Transcriptional regulators 78 39 Op 5 . + CDS 81978 - 82868 976 ## COG2103 Predicted sugar phosphate isomerase 79 39 Op 6 . + CDS 82881 - 83870 994 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 80 39 Op 7 . + CDS 83880 - 84299 553 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA + Term 84306 - 84340 6.2 - Term 84294 - 84328 6.2 81 40 Tu 1 . - CDS 84333 - 85142 830 ## EF0462 hypothetical protein - Prom 85294 - 85353 7.4 + Prom 85229 - 85288 5.8 82 41 Tu 1 . + CDS 85336 - 85944 757 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 85961 - 86010 16.5 + Prom 85991 - 86050 3.0 83 42 Tu 1 . + CDS 86092 - 87072 1017 ## COG0253 Diaminopimelate epimerase + Prom 87084 - 87143 5.6 84 43 Tu 1 . + CDS 87222 - 88430 1369 ## COG1316 Transcriptional regulator + Term 88447 - 88493 10.8 + Prom 88469 - 88528 9.1 85 44 Op 1 . + CDS 88560 - 89261 1106 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 89270 - 89330 17.6 + Prom 89276 - 89335 6.0 86 44 Op 2 . + CDS 89357 - 90058 956 ## COG1285 Uncharacterized membrane protein 87 45 Op 1 8/0.000 + CDS 90428 - 90997 727 ## COG1704 Uncharacterized conserved protein 88 45 Op 2 . + CDS 91043 - 92329 1095 ## COG1512 Beta-propeller domains of methanol dehydrogenase type + Term 92332 - 92381 13.1 - Term 92325 - 92362 6.0 89 46 Op 1 24/0.000 - CDS 92369 - 93334 1162 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 93441 - 93500 4.7 - Term 93483 - 93519 3.3 90 46 Op 2 18/0.000 - CDS 93535 - 95694 2229 ## COG0209 Ribonucleotide reductase, alpha subunit 91 46 Op 3 11/0.000 - CDS 95675 - 96052 245 ## COG1780 Protein involved in ribonucleotide reduction 92 46 Op 4 . - CDS 96054 - 96278 353 ## COG0695 Glutaredoxin and related proteins - Prom 96473 - 96532 7.1 + Prom 96540 - 96599 5.8 93 47 Op 1 22/0.000 + CDS 96792 - 97265 577 ## COG1918 Fe2+ transport system protein A 94 47 Op 2 . + CDS 97262 - 99412 2102 ## COG0370 Fe2+ transport system protein B 95 47 Op 3 . + CDS 99419 - 99556 236 ## EF0477 hypothetical protein + Term 99788 - 99846 7.3 - Term 99780 - 99826 5.1 96 48 Op 1 . - CDS 99832 - 101001 797 ## COG0582 Integrase 97 48 Op 2 . - CDS 101045 - 101275 244 ## EF0480 excisionase, putative - Prom 101366 - 101425 76.5 + TRNA 101352 - 101424 81.5 # Lys CTT 0 0 + Prom 101351 - 101410 75.7 98 49 Op 1 . + CDS 101586 - 101696 163 ## 99 49 Op 2 . + CDS 101733 - 101813 60 ## 100 50 Op 1 . - CDS 102131 - 102373 152 ## EF0481 hypothetical protein 101 50 Op 2 . - CDS 102367 - 102642 266 ## EF0482 hypothetical protein + Prom 102779 - 102838 80.3 102 51 Op 1 . + CDS 103045 - 103152 161 ## 103 51 Op 2 . + CDS 103183 - 103323 65 ## gi|255973547|ref|ZP_05424133.1| LOW QUALITY PROTEIN: predicted protein 104 52 Tu 1 . - CDS 104021 - 104149 102 ## - Prom 104339 - 104398 9.9 + Prom 104168 - 104227 7.1 105 53 Tu 1 . + CDS 104473 - 104749 304 ## EF0485 aggregation substance Predicted protein(s) >gi|237663585|gb|GG668933.1| GENE 1 2 - 784 822 260 aa, chain + ## HITS:1 COG:lin2505 KEGG:ns NR:ns ## COG: lin2505 COG1801 # Protein_GI_number: 16801567 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 2 260 20 279 281 244 46.0 1e-64 KKRATLYEYASHLPLVEMDTAYYGIPPKERVAEWVKAVPENFRFVMKVYSGISCQGEWQT YYASEEEMITAFLESMAPLIESKKLFAFLVQFSGTFGCTKENVAYLQKIRHWFKDLPIAI ELRNNSWYQPNFVKQMLQFMKENQFSLVIVDEPQIPTNPVPFYPYVTNPNLVLFRFHGRN AAGWLANDAEWRKKRTLYHYNTQEIADLSEAVLKMSQEAKEVGVIFNNNSGGDAAENALQ MQKVLNLSYDDLNPKQLDLF >gi|237663585|gb|GG668933.1| GENE 2 801 - 1337 545 178 aa, chain + ## HITS:1 COG:L143879_2 KEGG:ns NR:ns ## COG: L143879_2 COG4696 # Protein_GI_number: 15672719 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 14 170 21 176 184 168 56.0 4e-42 MSEKQSPYEMACAFHEVFNPQQPEQPTAFSPELASRRAEFKVEELVEFLYSAANNDQVLF QQLVNGLKKSVDKAEQKVLAKGKPVSDPLVEEVDALVDLLYFTYGSFCLMGVNPTKIIEI VHQANMGKLFPDGQPHYDPETNKVLKPENWEQDFAPEAKIKAEIQRQLKITETNEKDE >gi|237663585|gb|GG668933.1| GENE 3 1360 - 2712 1521 450 aa, chain - ## HITS:1 COG:SP0413 KEGG:ns NR:ns ## COG: SP0413 COG0527 # Protein_GI_number: 15900332 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Streptococcus pneumoniae TIGR4 # 1 448 1 448 454 560 62.0 1e-159 MNVVKFGGSSLASAPQLQKVLQIVKEEPRRTFVVVSAPGKRTPQDIKVTDLLIQYYQRYL NNEEIESTISAIIRRYEDLFDELHLDKAVLADIAISIRQLATLPKENNAFLFDYFLASGE DNNAKVVASFFNQNGLDARYISPKELGLLVTPEPGNARILPKALEKISAYRETQQILVIP GFFGYTEAGEICTFSRGGSDITGSIVAAGVQADLYENFTDVDGIYVAHPGIIEQPQTIQE LTYREMRELAYAGFAVLHDEALMPAYRANISVVIKNTNNPHHPGTLITTSRKVKHAPVVG IASDQGFASIYISKYLMNRELGFGRRLLEVLEKLALSYEHMPSGIDDITIVLREDQLTTE IENRLMAQLQEVLAPDELRITHHLSMIMIVGEGMRQRIGVTAESTMALAKEKINLEMINQ GSSEVSIMFGIKKEQEEKAIKALYRTFFHD >gi|237663585|gb|GG668933.1| GENE 4 2899 - 3585 789 228 aa, chain + ## HITS:1 COG:L150333 KEGG:ns NR:ns ## COG: L150333 COG0637 # Protein_GI_number: 15672725 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Lactococcus lactis # 7 219 5 217 222 175 42.0 7e-44 MTESKTAIIFDMDGVLVDSEAYYYERRKAFLAEFDLTIEGLTLRELVGADMRSLWQKIEQ VNKRELDIAFLNEQYIAYKKAHPIDYLAVLDENAKRVLQFLKRQGYKIGLASSSTKDAIE EVLTVGQLSSYFDAVVSGEDFEESKPAPDIYLHTLQELAVAPQECIAIEDSEKGIASAKE AGLEVWAMRDEHFGMDQSQADAFLTQLSDICKKISENRIDESSKSTPS >gi|237663585|gb|GG668933.1| GENE 5 3771 - 5507 1994 578 aa, chain + ## HITS:1 COG:L7722 KEGG:ns NR:ns ## COG: L7722 COG4477 # Protein_GI_number: 15674133 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Negative regulator of septation ring formation # Organism: Lactococcus lactis # 20 574 19 574 576 397 40.0 1e-110 MKNNWIIILVLVIVIIAAVLYLIGYFMRKKNQEQLDELEVRKEALFDLPVFEEIDDIKKM HLVGQSQNSFREWNQRWVELSTRSFAELESQIYEVENQNEIFRFMKAKKAVVEANETMTE MEAEVEVIRNGLKELRESEERNSLEVQKALDVYEELSKSLKDDKASFGPAYSEIQKQLRN VEIEFTQFVTLNTSGDPIEAREVLEDAERHTYELEDLMKRIPPMYEELNETFPDQLKEIE EGYNQLLADDYVFPEQNFAEEIQHAKKRVENSMADLEKTEIAAVEVANRDTATAIDALYE VMEREIEAKKYVVTNQKIIDDYISHSLKNNRQLMIELDHVSQSYTLNNNELGRSRGFQTE IEEIIRRQKDLEPRMKEHTVPYSEIQAFYKECYKILDDIENQQLEIDASLKELRKGEKVA QEKVDEYEFRLRSIKRYVEKQRLPGLSADYLEFFYVATDRIEDLSRALNKMRINMDEINR LCDLCEDDLELLDKKTKDLVNAAALTEQMMQYANRYRHTHENIRTALDKSMYLFSTEFRY QDALDEIGTALEAVEPGAFKRIEDFYFKNINNPNLTAI >gi|237663585|gb|GG668933.1| GENE 6 5633 - 6778 1154 381 aa, chain + ## HITS:1 COG:L122222 KEGG:ns NR:ns ## COG: L122222 COG1104 # Protein_GI_number: 15672519 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Lactococcus lactis # 1 381 1 380 381 476 61.0 1e-134 MIYFDNSATTPIYPQALDTYVKTSQRIIGNPSSLHDLGNQANRLLQQARKQIAELINVSA NEIYFTSGGTEGDNWVLKGTAIEKREFGNHIIISAVEHPAVTETAEQLVELGFELSYAPV DKEGRVKVEELQKLIRKETILVSVMAVNNEVGTIQPIKEISEVLVEFPKIHFHVDAVQAI GKVNYSEWLTDRVDFATFSAHKFHGPRGIGFMYWKQGKRLAPLLTGGGQENNQRSGTENV PAIVAMAKALRLHLENEQQRPQHVATLRSYLLKALEEFQNVTVFSQDNEHFAPHILCFAL KGIRGEVLVHALEEKQIYISTTSACSSRKKMASSTLYAMHVPGELATSAVRISLDESNTM AEIEQFMIVFNQLYQKFSRVN >gi|237663585|gb|GG668933.1| GENE 7 6832 - 7524 659 230 aa, chain - ## HITS:1 COG:CAC0321 KEGG:ns NR:ns ## COG: CAC0321 COG0745 # Protein_GI_number: 15893613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 5 228 4 228 230 249 57.0 3e-66 MKPHVLIIEDDPSIADLQKDYLEINDMTVTIEHDGKKGLEAALNEPFDLIILDVMLPTMD GFEICRAIRKKKQTPIMIVSAKKEDIDKIRGLGLGADDYIIKPFSPNELVARAKAHMNRY QLLSKAEQPPQLLKINEIAVDTAAHKVFVLENEVIFTSKEYKLLVFLMEHPNRVWNKEEL FESVWGFDALDTEVSTVVVHIKRIREKLKKANLSDSPIETLWGSGYRFNR >gi|237663585|gb|GG668933.1| GENE 8 7521 - 9002 1366 493 aa, chain - ## HITS:1 COG:CAC0317 KEGG:ns NR:ns ## COG: CAC0317 COG0642 # Protein_GI_number: 15893609 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 149 488 157 493 498 207 37.0 5e-53 MTIKRRFFISYISAIIITLASVLAVLSLASYITLGTVPSLPQAYRMMNKQRPLTANEEES YLSLDQLLKKSPKLLDTPLSKELKETIQTIEEKGLSVIIRKNARFPYYSDNLVEKSLSVH IPNYEMNNIMPTGTLDNAGRLYHYVKSDFHYLDGSNGSFIVLKRESSLFEFFTRWIIWMI LLIVLVAIAAAWLINKRLTKTTIEPLEALEKATKTLGKEAQKENPFTPTNHQTVSTEVKQ LQLSFEQMWQDLEEANAEREKYEDNRKELIANISHDLKTPITSIIGYVEGLMDGVANTEE KKQRYLTVIHEKSLGLNDLIEELFLYSKLDLDRAVFTMEKTNFTRFIAHILEEYRLEQEL VITSVLPTEALYVQMDPTQMNRVITNLIQNSIKFADPTKEQLAFTISLTHNQTDLVLTIT DNGIGIDKKELPYLFERFYRVDKSRTPTVKGSGLGLSIVKQIIDYHQGTITVTSKKGDGT NVIITLPLLEDEK >gi|237663585|gb|GG668933.1| GENE 9 9188 - 10165 1224 325 aa, chain + ## HITS:1 COG:no KEGG:EF0374 NR:ns ## KEGG: EF0374 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 1 325 1 325 325 502 98.0 1e-140 MKKKKVFSALTLLTFSTLLIAGCAGGANSATDKSSAASSSTAVSSSAEAAKEQSKGQELT EILSSTDWQGTKVYDKNNNDLTAENANFIGLAKYDGETGFYEFFDKETGETRGDEGTFFV TDDGEKRILISDTQNYQAVVDLTEVTKDKFTYKRMGKDKDGKDVEVFVEHVPYSDKKLTF TNGRKDLETETGKIVTNEPGDDILGATLWNGTKVLDEDGNDVTEANKMFISLAKFDNKTS KYEFFDLETGKTRGDFGYFQVIDNNKIRAHVSIGDNKYGAALELTELNDKRFTYTRMGKD NNGKEIKVFVEHEPYEGDFTPNFTF >gi|237663585|gb|GG668933.1| GENE 10 10350 - 11315 1204 321 aa, chain + ## HITS:1 COG:no KEGG:EF0375 NR:ns ## KEGG: EF0375 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 321 1 321 321 575 98.0 1e-163 MKKKVLSSITLVTLSTLLIAGYASPAFADHAANPNSATANLGKHQNNGQTKGDKATKILS GTDWQGTRVYDAAGNDLTAENANFIGLAKYDGETGFYEFFDKNTGETRGDEGTFFVTGDG TKRILISRTQNYQAIVDLTEVSKDKFTYKRLGKDKLGNDVEVYVEHIPYHGKKLAFTNGR EALTNQTGKIVTNKSGDKILRTTLWNGTKVVDKNGNDVTAANQNFISLAKFDPNTSKYEF FNLQTGETRGDFGYFQVVDNNKIRAHVSIGTNRYGAALELTELNNDRFTYTRMGKDNAGN DIQVFVEHEPYQGTFNPTFTF >gi|237663585|gb|GG668933.1| GENE 11 11489 - 12292 986 267 aa, chain + ## HITS:1 COG:PA2498 KEGG:ns NR:ns ## COG: PA2498 COG0666 # Protein_GI_number: 15597694 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Pseudomonas aeruginosa # 75 263 19 204 210 147 44.0 2e-35 MNKKILMGLLSVVTIPLLAACQGGETPSAASKNSQTVTTQSSAKTESTSTTRSVAQTTSK EEVKEPMKTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEI AKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKNATPDLTKHNRYGGNALIPAA EKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIK DNSGRTAMDYANQKGYTEISKILAQYN >gi|237663585|gb|GG668933.1| GENE 12 12344 - 12892 741 182 aa, chain + ## HITS:1 COG:ECs0373 KEGG:ns NR:ns ## COG: ECs0373 COG0402 # Protein_GI_number: 15829627 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 2 180 53 234 460 93 35.0 2e-19 MNYWLKNVRIETGYQKEGDWLSGTVTKEVAIEVTDGVFTKIIPNEELVEEPGLTIIDGHH QLILPGLIEKHCHFDKSKLGVPWYPVTPAKSIVERVEAEIPYLDSLELSLTERANHLIDL ELPHGATAFRTHVDVEPMTDLRYFDEVQALGQAKPFAVEIVVFPQHGLLRSDSVELVDQA SS >gi|237663585|gb|GG668933.1| GENE 13 13008 - 13373 417 121 aa, chain + ## HITS:1 COG:ECs0373 KEGG:ns NR:ns ## COG: ECs0373 COG0402 # Protein_GI_number: 15829627 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 10 119 346 455 460 73 33.0 1e-13 MPITPNTIPPIMELLRHGVNVHLGCDNIYDCWSPYGDGSLQEKLARLGELFNVKDQDALT QLLGLVTDGITTLDEQGQANWPQVGAEATYLLTEAECAAAFVARQTPVEISVVKGTTLYQ K >gi|237663585|gb|GG668933.1| GENE 14 13414 - 14226 731 270 aa, chain - ## HITS:1 COG:SA0310 KEGG:ns NR:ns ## COG: SA0310 COG0657 # Protein_GI_number: 15926023 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Staphylococcus aureus N315 # 26 256 32 259 275 104 29.0 2e-22 MKNNQTLANGATVTIYPTTTESTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLAL DYLLAPNTKIDHILGTLTETFQLLNEEIIQNQPFGLCGRSAGGYLMLQLTKQLQTLNLTP QFLVNFYGYTDLEFIKEPRKLLKQAISAKEIATIDQTKPVWDDPFLSRYLLYHYSIQQGL LPHFYGLPENEDWSAYALSDETLKTFPPCFSTASSSDEEVPFRYSKKIGRTIPESTFKAV YYLEHDFLKQTKDPSVIALFEQLDSWLKER >gi|237663585|gb|GG668933.1| GENE 15 14201 - 15793 1072 530 aa, chain - ## HITS:1 COG:BS_yunI KEGG:ns NR:ns ## COG: BS_yunI COG2508 # Protein_GI_number: 16080295 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Bacillus subtilis # 1 520 1 528 531 103 22.0 8e-22 MKLRELLSIGDLKKGKILTKEIGLDNEVDSAMVLEAIDIENWSRKNQLILTSFYALHDLP EKELENFFVKMRRIGISGLILKTDRFIKMIPEWFIELCFNYEIPLIKITQDISYEKILFT IYEPLLNYQSHVLRTYYDVRQRFTKLERHYPTVETIMQEFYDIIKLPFALKMLDKHLEIS DGDLPHDAIVLSREKLKNSEFTKNDYSLLTLYSHANPKKQLALEVSIFNSYSTNCLLLVY LQDEKVKETDLVIIENAIDVLQEKFNTENLLKKERYTRLNNLADAILQNTPQNPDELNSL LREVQMQELDSYQAIAFSTKDTNTQLMKERIIALLRTLRVKSIFFDQLNYSAVLFNFNES DGKITKLQLSRLLAELLEENDTLTVAVSSLKSREGIKELLIECLDILRFNETFYNGPIVT LADIGVFKNFIREDQLENLDELIPRALYQLAENNYDLFETLYSFFKNNRNYKQTSEAMFL HSKTIRYRLNKVEQLLDIDLANPLQLLNYEIATYIIKMRRRALEKQSNTR >gi|237663585|gb|GG668933.1| GENE 16 15916 - 18927 3772 1003 aa, chain + ## HITS:1 COG:ECs0580 KEGG:ns NR:ns ## COG: ECs0580 COG0074 # Protein_GI_number: 15829834 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 579 1 555 555 369 38.0 1e-101 MLHTVILKNNYQDSINLMLLTNKINALDGVTMSQIMMGTDANKDILNNTNLLTDEANSAS ANDMMIVVDSEKENIMEEVMPAIDEFLDDLSAKGTSEEAQAATSWSEAFDLLPEANVALF SIPGEYGAPEMERALKNDLHVFSFTDNVSIEDEVRLKKLAHEKGLLMMGPDCGTGIISSI PIAFTNVVSPGNIGVVGASGTGIQEVTTIIDRLGGGVVHAIGTGGRDLSDKVGAITVKDA IVALENHEPTDVITVISKPPAKEVRDEVVELLQSISKPVVAIFLGEKPTSHEGKVYLAHT LEETAKIAVDLANDVAVKKNYFEALAKPAVPTLPEDKVVKGLYSGGTLASEAGMLISEAL DLGGLVKAEGYVLKSHGYEVIDLGDDMYTQGRPHPMIDPDVRIEKIREYAQDEKTGIILF DVVLGYGAHEDMVGALLPAIEEARATAKEAGRDLYFVATVCGTTKDPQNYQSSVDRLKEG GVLVAESNAKAVQLALLLKGIEISEDDKEVVAYNGPTVDVPKPGEKVMELLTTKPRIINV GLQSFTESIVDYGGETVQFNWRPRANGNKKMIKILDALEDYSEQIEAENHKVTDKIKNAQ PFLVDVVPAKSVIPELNDDAQKTLLHAGPPIQWSEMTGPMKGACIGAALFERWADNEEDA LKIFEAGEVRFIPCHHVKAVGPMGGITSGNMPVFVVENRLEGNEAYCILNEGIGKVLRFG AYSQEVVDRLDWIKDVLGPTIAKALKLSEEGLNLNVLIARSITMGDEFHQRNIAASLNFL KELSPLIIKTDIPEDQKYEVIKFLADTDQFFLNVMMATGKAIVDGARKDTNGTIVTTMTR NGVNFGVRIAETGDQWHTAPVNTPKGLYFTGFSEEDGNPDVGDSAITETVGVGAMAMVAA PGVTRFVGAGGFEDALATSNEMAKICEGHNPTFSIPTWDFQGTCLGIDIRKVVELGITPI INTGIAHKNAGVGQIGAGTVRAPLGCFEKALEAYAEKLGITVE >gi|237663585|gb|GG668933.1| GENE 17 18920 - 19753 675 277 aa, chain + ## HITS:1 COG:no KEGG:EF0384 NR:ns ## KEGG: EF0384 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 277 1 277 277 466 99.0 1e-130 MNNQLVISDYIFPIHQYGKMGTIHSVFERSFNLKVQDQLINVANFHNYLSSFGMFLPDQL FQEIFPYVQQGNKVKITENQLTFYSTVGVKTIQLTPAEVVSLNITHFKLEKDQLRLLQDR LLARNLERRIGLPLDERAKHIFKKMSQKQKVWTLSEWQEVTNYLIGRGKGLTPSGDDILV AYQTILFILADERAAALAATLSAANLSTTDVSKGYIASSAKGYVNSLLYQLLLDLENHRD NRVDENIDRIIQIGHSSGKDMSFGMLLALQSVELDEK >gi|237663585|gb|GG668933.1| GENE 18 19763 - 21016 1464 417 aa, chain + ## HITS:1 COG:STM0520 KEGG:ns NR:ns ## COG: STM0520 COG0477 # Protein_GI_number: 16763900 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 16 405 11 399 415 219 34.0 9e-57 MENSKKNQAVQVSNSYWIKVVAIFFVGWILMYATRTIFNPVMGVIGEQFGLSNTQLGLAN SIFFLTYAVAQIPFGMIGDKIGRKLVIAVGFIVLAISTYFSGLATTFVMFLVIRAIAGIG QGAYYGPQYALSTEAIPASKRTIGNAIINSGMAFGTSGGYLLSSKLVLENGEHWSKPFFI MAIPTFIVGILFYTILKEKVIRPGEEAARAAAEEGPQEKISLKEIFSNRNLLAAFILCFT SIYANFVIITWLPQFLIAERGFTGASVGFISSLVPWASIPGALIFARLNDKTGATKKLVF TLVPLAILSVFAIAFVTNRTLLISVLILYGLTGKLALDPIMVTFVTKHAPKAALGTTLSA YNFIGMSGSILAPYVTGYLADTAGSMQVGFYLSCVLLVIGLLAFAFLAKDESKPKLG >gi|237663585|gb|GG668933.1| GENE 19 21151 - 22089 1226 312 aa, chain + ## HITS:1 COG:L92850 KEGG:ns NR:ns ## COG: L92850 COG0549 # Protein_GI_number: 15674015 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Lactococcus lactis # 5 308 6 312 314 305 53.0 8e-83 MSLNVIALGGNAILDTDPTDEGQKAVVNHAAKYIAEFVAKGEQVIVCHGNGPQVGNLLLQ QKAGESEKNPALKLDTCVAMTQGSIGYWLQNALTNEFEKRNIAKPVISVVTQVRVDKEDP SFKKPSKPIGPFYTKEEADAEAAKDGSTYVEDAGRGYRKVVPSPMPKEIVEKEAVRALVE ADVLTICSGGGGIPVVAEDGQYVGVEAVNDKDFSARVLAENVDADRLIILTGVDNIYINY NQPDQKALEQISVAEAEEYIKEGHFAAGSMLPKIEAALDFVKGDDKRKAIITSIENLENI DKEAGTVISQKG >gi|237663585|gb|GG668933.1| GENE 20 22096 - 23316 1115 406 aa, chain + ## HITS:1 COG:RC0223 KEGG:ns NR:ns ## COG: RC0223 COG1301 # Protein_GI_number: 15892146 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Rickettsia conorii # 9 403 6 399 399 186 29.0 9e-47 MKKPSMITQIAIAVVVGILVGLLIPASGNYLKIVGDVFLRLMQMAIPILILGQIVQAVGS INPKELTSLGGRTIAVFGISSLAAALWGVLMAVIFNPGYGVKMTGFQDASIKAQEISITD TILNFVPKNIFDSLTQGSIIQIIVFALFFGLALNKYLQSHPETQLFQIIVDFNEVIITVI RYVMYLAPLGIFALIASTISHLGLQIILPLVKYLLVYGLGTILFLGIWILVITLYCKVSP LRLITNMKNMSVMALATTSSAITLPVALEETETKLGLSKRITNLVLPLGMSLNSNGSAMH MAFTVMTIAQMYQLEFDITKMIYLAITATFVSLANAVVPGAGLVSLAVIVPQMGLPIESI AIFAGVEWFVGMLRTILNVNSDVYSAILVAKSVDEIDYTVFNSSNK >gi|237663585|gb|GG668933.1| GENE 21 23406 - 24467 1368 353 aa, chain + ## HITS:1 COG:ylbC KEGG:ns NR:ns ## COG: ylbC COG2055 # Protein_GI_number: 16128501 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 7 353 3 349 349 404 55.0 1e-112 MEEMVVVTPEKLEKLMKQKLEAAGLHSEHAEEVARHLTFADASGIHSHGAVRMDYYAERI AKGGITIDPELSFEKTGPSTAIFHGDNGVGQFVCNEALAAAVDLAKESGLAYVGVSQTSH SGTLSYYVKKAAEQGMVALSMCQSDPMVVPFGGTSNYFGTNPIAFAAPRAGYEPVVFDMA TTVQAWGKILDARSRDVEIPDTWAVDEKGQPTTDPYEVRGLLPISGPKGYGLMMMVDVLA GSLLGLPFGKHVSSMYADLTEKRNLGQMFLVIDPSRFTDSERFKENINQMVEELHSVPTA EGFQQVYYPGEIGQLNYQKAMSEGIEIPQSIYDYLVSEIVHYDKYGGQGAFAK >gi|237663585|gb|GG668933.1| GENE 22 24533 - 25888 1771 451 aa, chain + ## HITS:1 COG:no KEGG:EF0389 NR:ns ## KEGG: EF0389 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 451 1 451 451 663 100.0 0 MKKSSKVALIFAFLVSIFVPVAAFADEIGDVVAPTGIMALVVIIPLIVVLVLLFMKVDMI IAGLIGGVLAMLIGGIGLEEANKQMLEAIPMMLGITVPIINSAVAMAVFKAGSYSAALTL AKRGTKGKVEYVSAFIVILLAAATYMSGIGGGSAMVIAPLAFAAVGVVPELIAAMSLAAA VSFTTSPASLESSIVSKLGDISVGSYVSTMRPYWLFFVALAIVLAFWGTKHRNVGFKESA DDEFDKKSNGELFKITLPAIFLLFAVIFGPIVNDLIGFAFFTPLVYMILTLVLIFLCTDF SMNKSVEAMVDGSTYILTRLFQVGIFLAFINVIAQTGTFAVIAGVAENAPAFIVVPVAIL TGILIGIPAGAYVGSVLTLVLPVAVSLNFPPLALGFVAMGVGLGSQMSFVNITMQALSSG FQIPILDVVKGNVKWLSIASVLLLVIGLIFG >gi|237663585|gb|GG668933.1| GENE 23 25913 - 27136 1847 407 aa, chain + ## HITS:1 COG:SMa2371 KEGG:ns NR:ns ## COG: SMa2371 COG0402 # Protein_GI_number: 16263735 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Sinorhizobium meliloti # 2 403 3 407 432 240 34.0 3e-63 MDLLIKQVRLQDGEALQDVAIKEGKIIEIAPVITGDAKEVIEADGRVLIPGFVESHLHLD KALIADRKPNKSGTLKEAIEVTAELKPTFTEEDIYDRAKRALEMLIVHGTTALRTHAEFD PAQGFTGFKTIMRLKEEYKELIDMQVVAFPQEGIFKAPGTEQMMYEAMDMGADVVGGIPY NDAPAKEHIDLVFEIAKKYDKDVDLHQDFADEADDMSIEYLCEKTIAEGYQGRVSVGHLT ALHALPEAELAPIIAKMAEANISVMALPATDLHLGARGDQYNVRRAVTPIRKLRDGGVNI CIATNNIRNAFTPYGTGDIVQTAMLAIPVGHLGGADDLKTVLPMVTTSPARAMGLEGYGV AVGNKADLVLLDTKVVEHAIIDIPERLYVIKNGRVTVKTDKKVEIIR >gi|237663585|gb|GG668933.1| GENE 24 27276 - 28787 1005 503 aa, chain - ## HITS:1 COG:no KEGG:LM5578_0478 NR:ns ## KEGG: LM5578_0478 # Name: not_defined # Def: hypothetical protein # Organism: L.monocytogenes_08-5578 # Pathway: not_defined # 18 469 19 460 495 94 21.0 1e-17 MEILDTFFGSEVKKELDLLRLLYHKKNFIRIETLSQLLQMDRRSINKYYESLISKPYVLA NNCSHIFSAERGKGYCFMGSKKEYKILTKQILQSSPYFTLLEKLFFESNVHLTKFSMDQF LSESTVRHKVAELDTILKTFDFSIQRTKGEIRLVGAEPRIRFFMIAFYWRVFSGLDWPFA DVSQTKCETLAKELIALGYFPANQLNMKLICYILAVNIIRYRKGFQINFLLSESISSLSD EDQEVLLQFVDTHHLLKEHLENQLTNAFLLPKSESQLIFLFLLTNTTVQLSNKHFIDLIE PNQPFSETNSFIKKILHSLETENPHAFETTKNRGLFTKQLVAGLLFVELFEQMDFTLTGY NIKKYLLQNFAHLFEHAQKIVAEQDIYVSNPAKQTGLGLQLSTAYTLITAPTAFNQTIHI KIETDLPTPIEAIIIQRIRETFASFYHLAINQLSEEDRYDLYLSTTPLLQVKQAAPFLLI NAQVSLPDLLAIQEQLDRLVAKK >gi|237663585|gb|GG668933.1| GENE 25 28979 - 30997 1656 672 aa, chain + ## HITS:1 COG:no KEGG:LKI_08020 NR:ns ## KEGG: LKI_08020 # Name: not_defined # Def: hypothetical protein # Organism: L.kimchii # Pathway: not_defined # 31 605 48 653 894 155 24.0 5e-36 MKKTTLFLFMFFFLMIIFSIDVSAETYNFNYKNDEQGHYLTNGISEGDTYNYDYGHAPEA TFDEEKYVNYGDEAYLKKSVAAVTGQQGLFNVTLDVKGNQTESPIDLVLVIDYSSSMKGE KLNNALKGLQQFGEELSDSLTDGHVRIGIVAYNRLTYSTADFSTDMNDLEDFLRNTAEPH SGTFMQKGLLEGQRLLAEKSRPNAKKMLVHIGDGSANASFLPRENAQIYPNNGEIIDYNG YHTSSYMEEFQTESNQYYTSNSASTDANAIQTNSTTVTDNTLGTIVSLKKSGDTYYSIAA NPSLRGEYISRNIASDPKNYLIIDENLSGLGTALKELAGSINNTIHEGLIIDPMGENILL QGAGNFTEDNYQLKGWRKIPTGEWLEASDLLTDVVVTEENQVLHISTISLGKNERLTLTY QIRLNTETNDFKGDTWFLCNDRTTLQPTPEEEAVDFPIPAIKAPTVQLKLIKNWENIAEK EIPEAIQYQVTRKATTEEAAWSTSEVMQLTKKEGYQKLINQVTVNGAEVVLPKFNNRGED FIYQIEEVNVPSEFDSIMTKTKDEFILTNRRKEVVSSTTDTSTNESLSSETATTNSSAEK TIVLETTTATSELKDNNFLAETNTTAKKITKATPNDTHLPKTNETQKFQRVFLLLGGLLV GLSGFYLLKQRN >gi|237663585|gb|GG668933.1| GENE 26 31424 - 32809 1696 461 aa, chain + ## HITS:1 COG:SP2216_1 KEGG:ns NR:ns ## COG: SP2216_1 COG3883 # Protein_GI_number: 15902020 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 268 1 269 270 106 37.0 8e-23 MKKRLFASVLLCSLTLSAIATPSIALADNVDKKIEEKNQEISSLKAKQGDLASQVSSLEA EVSSVFDESMALREQKQTLKAKSEQLQQEITNLNQRIEKRNEAIKNQARDVQVNGQSTTM LDAVLDADSVADAISRVQAVSTIVNANNDLMQQQKEDKQAVVDKKAENEKKVKQLEATEA ELETKRQDLLSKQSELNVMKASLALEQSSAESSKAGLEKQKAAAEAEQARLAAEQKAAAE KAKQAAAKPAKAEVKAEAPVASSSTTEAQAPASSSSATESSTQQTTETTTPSTDNSATEN TGSSSSEQPVQPTTPSDNGNNGGQTGGGTVTPTPTPEPTPEPEKPTPPTPTPSADPTINA LNVLRQSLGLRPVVWDAGLAASATARAAQVEAGGIPNDHWSRGDEVIAIMWAPGNSVIMA WYNETNMVTASGSGHRDWEINPGITRVGFGYSGSTIVGHSA >gi|237663585|gb|GG668933.1| GENE 27 33217 - 34344 1452 375 aa, chain + ## HITS:1 COG:lin0838 KEGG:ns NR:ns ## COG: lin0838 COG0620 # Protein_GI_number: 16799912 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Listeria innocua # 1 375 1 365 367 365 50.0 1e-101 MSSQIPFTVDHVGSFLRPETIKKARKKVQAGALSQAELRLIEDEEIKALVAKQKAGGLRG ITDGEFRRGFWHIDFLEGLNGVTGYIPETGYNQTFHGKAAPAYNIRVVDKISFPAQHPFL EDFSFLKEVVEVGDGTVAKATIPSPTMILRQEILSNDGTSRIQTIYPEIGAFYKDLAQTY KDAIAAFYEKGCRYLQFDDTNWAFLADQTKQEELRAKGIQPEEIAQVCTTIINEALAGKP EDLTVTTHICRGNHASSWLFSGGYEPIAKELFATNYDGFFLEYDSDRAGDFSPLRHWQNN GSKVVLGLVTSKFPELEETEQVKARIEEAQQFVPLENLSISPQCGFASTEEGNRLTEEEQ WRKVQLLQEIAREVW >gi|237663585|gb|GG668933.1| GENE 28 34565 - 35749 1196 394 aa, chain - ## HITS:1 COG:SA1192 KEGG:ns NR:ns ## COG: SA1192 COG0628 # Protein_GI_number: 15926939 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Staphylococcus aureus N315 # 6 383 18 393 402 265 35.0 1e-70 MDKESTKWIRFLGGKNLLYTLTILCLIAVTIFLFNTVSFIFKPIFVIFSAVLGPVLFGII LFYLLNPMVKRLEKKIPRVWAIAILYVLIIALLVLAGLQLFPIIQDQTEELIKQFPSFWK STLQAVQEFMAKTPFAKDLESANESINQLWGKLANSFKDFAGDYLQTGAQGLGSVFSAVS STFLTLFTGPIIAFFLLKDKEKFYRFVKGIIPPAFRPDFDEYSQIANIQIGDYLKGQVIA SLVLGIMYWPAFLLIGLQFGSILALAAGILCIIPYIGPFIAFIPGLIIAFQDSTFMVVKF VIVWFAIQLIHGDFVIPRVMGDKLKVHPITILLVLLVMGELFGLMGVIFGIPMYCLVKVT VIYLFRKFKQRYNRFYGDNGEYEHTNFTKDQYLK >gi|237663585|gb|GG668933.1| GENE 29 35765 - 36280 509 171 aa, chain - ## HITS:1 COG:no KEGG:EF0397 NR:ns ## KEGG: EF0397 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 171 1 171 171 248 100.0 6e-65 MFQTFRENFRRHTLLRDAVFIVIGSAIVFNPGAFFQFVGYLIAGYLMLLGLINIYDDYKI KKQTGSWGLGFVTGLIFVVLAVAFLFFAPVIVSILPFLLGISIVINGLVQLTFALNTRQT GALIYSILVLIAGAVLVFNPFKSLLVLMQVFGFILIFMGVIEIIGHFRNKA >gi|237663585|gb|GG668933.1| GENE 30 36357 - 36458 109 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLETVSLEKITLKIKKVLQMSENWHIMESEILF >gi|237663585|gb|GG668933.1| GENE 31 36473 - 37159 758 228 aa, chain + ## HITS:1 COG:SP0858 KEGG:ns NR:ns ## COG: SP0858 COG3819 # Protein_GI_number: 15900742 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 1 220 1 221 229 128 38.0 8e-30 MDLLPLLGVLIVIVGFALKFDAILIVMVALIVTAFTGGLGLTSMLETLGTTFVNNRGMAI FIIIMLATGTLERNGLKESAATLIKRFKKVSAGVIIDIYGVFRIIFAAFNVSFGGVAGFV RPIILPMALGTIESKNLPMVPEYEEELKGMASAMENICWFFGQVLFVGGAGALLVQSTLK DLGYEVTLGKLALVEVPVALVALISASIYFTLKEKRLRKKYYGQEGLK >gi|237663585|gb|GG668933.1| GENE 32 37156 - 38100 1103 314 aa, chain + ## HITS:1 COG:SPy0507 KEGG:ns NR:ns ## COG: SPy0507 COG3817 # Protein_GI_number: 15674612 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 15 313 8 305 308 207 41.0 2e-53 MSFFTDPSIDLSAKLLEVLYIFMGIILLYTSFRSFRDKTNQHAYGTSLFWGILGILIGFG RFIPPVACGVLIFVMTIPAILQKVTKGESRLPSKEYMEKMSQKLGMKIFIPALSIGVFAI LFATLTTLGALVGVGVGVFVAIFIMMFFSKNNTPKVFFDDAAEMLETVGPLSTLPMLLAC LGAVFTSAGVGEIISKGVSAVVPAGNVNVGIIIYAVGMVIFTAIMGNAFAAITVMTVGIG VPFVFSLGADPALVGMVALTCGFCGTLLTPMAANFNIVPVAMLEMKDKYGVIKNQLPIAL FMLIFQIVYMILFK >gi|237663585|gb|GG668933.1| GENE 33 38116 - 38757 866 213 aa, chain + ## HITS:1 COG:SP0860 KEGG:ns NR:ns ## COG: SP0860 COG2039 # Protein_GI_number: 15900744 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) # Organism: Streptococcus pneumoniae TIGR4 # 1 213 1 214 214 237 55.0 9e-63 MKVVVTGFDPFGGEEINPAFEAVKKLPAEIAGAEIIKVEVPTVFGTSGEKVAEAIETHQP DMVICVGQAGGRQTVTVEKVAINLAEARIPDNAGQQPSDVPLVEDGATAYFTNLPIKAMV KNCHDHQLPAAISYTAGTFVCNDIMYHLLHLINTKYPTIRGGFIHVPFLPEQTIDKPTFA SMSLEAITDSLFYMIEAAVKTQEDIQLQGGTTH >gi|237663585|gb|GG668933.1| GENE 34 38824 - 38913 69 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MACEKIFYTIFVDKSVSSWYIEIHKLLAQ >gi|237663585|gb|GG668933.1| GENE 35 39201 - 40604 1688 467 aa, chain + ## HITS:1 COG:NMA0715 KEGG:ns NR:ns ## COG: NMA0715 COG1757 # Protein_GI_number: 15793692 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Neisseria meningitidis Z2491 # 14 458 14 458 459 288 36.0 1e-77 MKEKQKKKTVSVREASIVLLIIVAAIATGVIGLKISPNITILFVIALILGYAMFRKVPFD QMHKGIVDGLKPGIIPIFIFILVGALIAVWIQAGIIPTIMVFGFKMISVKWFVPSVFIVC AIVGSAVGSAFTVMSTIGIAFFGIGSTLGLNPALVVGAIVSGSVFGDKMSPLSESTNLAA AIVEADLFKHIKNLMWSTVPAFIVSLILFMILGQTYANTSLTEVVQVIQVLEDHFTISIW SLLPLALMLICAWRKIPAIITILLNIIVAVIMIIIQNPKVSLQALGNTLENGFVSQTGNA QIDQLLSRGGIMSMMPTVALIILTLSLGGLLMELGLISAVMEVVSQKMSSTPKLILSTLL TGIGVNIFIGEQFLSVILPGNAFKEVYKKEGLDPTVLGRTLEDGGTVINYLIPWGIAGSF VAGTFGVPTLTYLPFVFFSLLSPVFSMVSAFTGLGIKRLSAEPVTEK >gi|237663585|gb|GG668933.1| GENE 36 40756 - 41190 515 144 aa, chain + ## HITS:1 COG:L102062_1 KEGG:ns NR:ns ## COG: L102062_1 COG1846 # Protein_GI_number: 15673454 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 3 109 1 107 160 100 55.0 6e-22 MSLSLREVSQLLCQLKVLDQKITKVFEEQVGLSLTRYELLMILKERQPCLQTEIQEHLKI DSGAVTRHLKILEEKQYVTRQRNPENNREVLVHLTEKAQQELQQCTAKQQTVTEIIPSTF TKDDCRQLKELLTKLDQSITTKEV >gi|237663585|gb|GG668933.1| GENE 37 41195 - 41830 851 211 aa, chain + ## HITS:1 COG:L102062_2 KEGG:ns NR:ns ## COG: L102062_2 COG0778 # Protein_GI_number: 15673454 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Lactococcus lactis # 16 211 1 196 196 289 73.0 2e-78 MTTYTTNDFSEIVFGRKSVRVYDETHKISHEEMLTMIQEATTAPSSVNMQPWRFVVVESE AGKEKLKPLIRFNTRQNETSSAMLLIFGDLNCHERGEEIYNQAYASGKMPKEVRDQQLAA IIPHYESLSREQMNDIVKIDASLAAMQFMLVARAHGYETNPIGGFEAEKLAETFGLDQER YVPVMILSVGKGMETGYESVRLAPEKITTFE >gi|237663585|gb|GG668933.1| GENE 38 41873 - 42706 589 277 aa, chain - ## HITS:1 COG:lin2847 KEGG:ns NR:ns ## COG: lin2847 COG0561 # Protein_GI_number: 16801907 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 1 277 1 277 279 303 54.0 2e-82 MAIKAIVMDIDGTLLTSEKKISPKTRQALVAAQKQGLSLILASGRPTNGMRPLADELEMA HYNGHLLSYNGACVTHHGSQQQLFNQTISKSLSQQILEHLKQFDVIPMINDETFMYVNDV FHHTLHLETGDFNIIEYESRGGNFQLCEWHDLAARLNFPLNKILIAGEPAYLQKYHEAIY APFKETVTAAFSAPFYFEFTAKNIDKARSLEKLTLQLGIAAEEVIAFGDGHNDYTMLEWA GTGIAMENAVEELKSIATEVTLSNDNDGIAVALANFL >gi|237663585|gb|GG668933.1| GENE 39 42890 - 44638 1356 582 aa, chain + ## HITS:1 COG:SP0394 KEGG:ns NR:ns ## COG: SP0394 COG2213 # Protein_GI_number: 15900314 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Streptococcus pneumoniae TIGR4 # 22 572 11 582 589 378 39.0 1e-104 MKEKEMHSLFFKHKFVKVIPYLRRFGHRLSGMIMPNLSIFIAWSLLSLVAGYTTGNLRLA LSEVETIMIRVVLPILIGFTGGKMFEEQRGGVVAAIATVGVIVSTDVPQLFGAMFIGPLA GYTFAKIEQIFLPKVKEGYEMLTKNFLAGIVGGLLCCFGILVVAPTVESASFWLYQFSSW LIEANLLPLVHVFLEPLKVLFFNNAINHGLLTPLGLEGASQTGQSILFLLETNPGPGVGV LVAFLLFGPVGQRKTAGGATMIQLIGGIHEIYFPFVLMDPRLFLAVIAGGMSGTLVFQIF NVGLSAPASPGSLVAILANAPTEARLAVFSGIFVSFLCSFAIASLLLKRQRGTEPVSMIK MKEKEEDQVETVTPNYQQILFVCDAGMGSSAMGASLLSRQLKAVNLEMPVTYQSVHQMKW QPKTLVVIQAELKQLAQKYVPEKDMVSVQNFLEIKSYYPQVLAKLTASSQEQSSLGSEST ETNPTKQIQKLVFLYAENVRGSQTMGMELLRQQAAKQGVAIEVSKEPLETVFFTKETTYV VTRELAQAYHLDLTQQNLYVVTSFLNKKEYQEWLEGGTDRCF >gi|237663585|gb|GG668933.1| GENE 40 44629 - 46662 1759 677 aa, chain + ## HITS:1 COG:BS_ydaA KEGG:ns NR:ns ## COG: BS_ydaA COG3711 # Protein_GI_number: 16077483 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 676 1 689 694 236 27.0 1e-61 MFLTTRETVLLTELVNSPTPVSVNRMMNLLKVSRRTVYRELENLETSLASMGATLEKVAR GRFSIQADEAAMTEIQAAILGEETQELSTLARQHAILLTLLQTKEPVSMHYFLETYCISN TTFYADIKQLETRIARIPLTISRNQGYEVTGSEKYRRLLMANILSMEINEYQFFHFTELT TSDHFFFQFIHAEHLAFAQKIVQPEVETLFPALSDRKLQHLILMLTIAMDRVTAGFYLAD ETYTGQMNKAFLNCSKRLFSKVAAETKQLYAVSEIVFFASLLSDFSNSFDEDFFDEHFDT QLAYAVKQLIEAVSQETEVNFFEDTNLYKMLLTHLSGVFSRAVLQEEDLTNPILERIMNQ YQEIAAALRQALPQIFPQKNLSEEEIAYMVLHFANSLERSPKIMEVDIAGFSPSGLASTS MLEMRLRRYFPFINQIHFFRIADLGKVNVEENYDLVISTSLLPGYNGKYKLISPLLLDDE IRQLKEEFKRISHEKRSLRKAPVKKTGGEESYETVVAFMEEISKLLETFFIADLNNQADL AETVQQALAQLSADLITDSAIVCQQLMKRYEQAPIGIPQTEMALFHTSSTAVTQPVFCIF NLAQPLMIEGMDKKPMQLQRMLLMLAPMPIDETIGKILGKISGAIIMNDLNTEIFHSGNE AIVYQLLSSLLIEEMKG >gi|237663585|gb|GG668933.1| GENE 41 46673 - 47107 473 144 aa, chain + ## HITS:1 COG:L32907 KEGG:ns NR:ns ## COG: L32907 COG4668 # Protein_GI_number: 15672005 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol/fructose-specific phosphotransferase system, IIA domain # Organism: Lactococcus lactis # 3 139 2 139 143 125 44.0 2e-29 MFEITAEQIMLNQSYASWEEALAASGELLLKNQLVTPDYVKAMYQRQQKVSVYIGNFVAL PHAEGQDEQVLKEGICFIQVPDGVNFGTEADRKIATLLFVVALKSQRQLSMLQELAFFCS DLENIQRLSDCQTIDEAQKILAQA >gi|237663585|gb|GG668933.1| GENE 42 47377 - 47472 143 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE >gi|237663585|gb|GG668933.1| GENE 43 47718 - 49490 2293 590 aa, chain + ## HITS:1 COG:SP0394 KEGG:ns NR:ns ## COG: SP0394 COG2213 # Protein_GI_number: 15900314 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Streptococcus pneumoniae TIGR4 # 7 584 2 585 589 603 58.0 1e-172 MEQVPEKNKVSIKAKVQRLGSTLSSMVMPNIGALIAWGVLTALFIPDGYLPNKAFATMVG PMLTYLIPLLIGYTGGKVIAGDRGAVVGAIATMGVIVGTDIPMMLGAMIMGPLGGFTIKK FDQYFQHRIKAGFEMLVNNFSAGLIGFALALLGFSAIGPIVDALTAAMARGVEIILNAHL IPLTSIFIEPAKVLFLNNAINHGILTPLGTEQVLSAGKSILFLLEANPGPGLGVLLAFMF FGKGAAKSSAPGAIIIHFLGGIHEIYFPYVMMKPLLFLSVIAGGATGSLVFQTLDAGLRA PASPGSIIAILAMTPMGSYLPVILGVLAATAVSFAVSAVILKADAKEESDEFAQKVKETQ AAKAASKGLTVANGSASLSGIQQIIFACDAGMGSSAMGASILRKKVQEAGLVQTVTNRAI NNLTDEGNTLIVTQAELQERAKQKAPNATFVAVENFLNSPRYDEIVAELSGTKEKNDAQP TASKATPASEIEGDLANVNEILLVHDDRVGSATMGMKVLEEILDKEKISMPIRKININEL TQQTQALIVTKAELTEQARKKAPKATHLSVKSMVNPQKYETVVSLLKESA >gi|237663585|gb|GG668933.1| GENE 44 49505 - 49942 536 145 aa, chain + ## HITS:1 COG:L32907 KEGG:ns NR:ns ## COG: L32907 COG4668 # Protein_GI_number: 15672005 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol/fructose-specific phosphotransferase system, IIA domain # Organism: Lactococcus lactis # 9 140 8 139 143 174 65.0 6e-44 MENLTNISIELNQQFNTKEEAIRFCGEKLVEAGCVEPAYIEAMIERDQLLSVYMGNFIAI PHGTEEAKKLVKKSGICVVQVPEGVNFGTEEDEKIATVLFGIAGVGEEHLQLVQQIALYC SDMDNVVQLADALSKEEITENLAIA >gi|237663585|gb|GG668933.1| GENE 45 49957 - 51111 1519 384 aa, chain + ## HITS:1 COG:L33416 KEGG:ns NR:ns ## COG: L33416 COG0246 # Protein_GI_number: 15672006 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Lactococcus lactis # 3 380 4 385 385 416 57.0 1e-116 MNAVHFGAGNIGRGFIGEILAKNGFHITFVDVNETIIQALKERKSYTIELADASHQQINV ENVTGLNNMTEPEKVVEAIAEADLVTTAIGPNILPRIAELIAQGIDARAEANCQKPLDII ACENMIGGSTFLAEEVAKYLKNPAYAEQWIGFPDAAVDRIVPLQKHEDPLFVQVEPFCEW VIDDTNRKAKEIHLEGVHYVADLEPYIERKLFSVNTGHATVAYTGALLGYQTIDEAMQDA LVVAQLKSVLQETGKLLVAKWNFDEQEHAAYIEKIIQRFQNKYISDAITRVARTPIRKLG AQERFIRPIRELQERNLVSPHLLAMIGIVFNYHDPEDEQSRQLQEMLDQESVDTVIAEVT GIEDPETVKNIKQNVERYARPQVA >gi|237663585|gb|GG668933.1| GENE 46 51180 - 52295 958 371 aa, chain - ## HITS:1 COG:L125707 KEGG:ns NR:ns ## COG: L125707 COG0665 # Protein_GI_number: 15673855 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Lactococcus lactis # 1 365 2 366 373 397 56.0 1e-110 MKKIAIIGGGIIGMTLANYLDPQKFDITVYDEGLGQATKASAGIISPWLSKRRNKKWYQL AREGAALFPKLVKDFQLTEDIYRQSGTVILRPAAALADLAHLAEERKQTAPEIGEITMLS AVQTAKFLPLLKETPSLFISGGGRLDGPAYLNHLQKRAEANGVTFCSQRAHFRQLNQGWE IVTNSEKKSVDFLALTPGPHLKELLATLNLSVDIRPQKGQLLVFETPFTNSQQWPVAMLD GEADLIPFNQGKILLGATHENDQAWDLEETVSAFQQLTSGTAPFLKEAEQLFKQPMHYRV GTRAYTSDFAPFFGPLPEMPHLVVASGLGSSGLTTGPFIGYQLAEYFNTGAFKGELYQKP LSQYVKNNPSL >gi|237663585|gb|GG668933.1| GENE 47 52374 - 53012 448 212 aa, chain - ## HITS:1 COG:YLR290c KEGG:ns NR:ns ## COG: YLR290c COG0702 # Protein_GI_number: 6323321 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Saccharomyces cerevisiae # 2 89 4 95 277 68 36.0 1e-11 MKVIIFGGSGFLGQQIAKILVQRQHQVISVSRHGKPTTLSASWSHQVQWVCSDVTRDTNW QEQVQRADWVIDTVGILFENPRKKKTYQRLILTPVKKISSFLAQQKKPAKFLFISANTVP FPLRKYMDAKLAAEELIHQEVAEAVIFYPSLLVGQERTGTILFSKCIYFFKKIPFLKNLF IGYDPVPVAEMAQEIVHVLEGGNSIYTHRRTR >gi|237663585|gb|GG668933.1| GENE 48 53357 - 54511 1275 384 aa, chain + ## HITS:1 COG:BS_yknX KEGG:ns NR:ns ## COG: BS_yknX COG0845 # Protein_GI_number: 16078499 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Bacillus subtilis # 73 364 76 377 377 76 28.0 7e-14 MGAVAVIAVGGIVTVNALNKNAQQVAVKQAPKDDWGIDYFDVPDLQQIYINGVIQPEQME AFARDQKITKDPEIKVKNGDVVDAGTELFTYEDESVTKEIEAQQNSLAKLETKRANIYNK WNRAIDKFNKTKEEDRTMSGDDLNEQYQTEVDAVDEEITFTNETLADLGAKQYISTKANF KGRVSIPEVKDANSPILRLTSEDLYLAGKVNEKDLTKISVGQKAKLTSVSNNVVVDGSIS YIDDNPPEGNSDAASGNPEGGTTMSSYSVKIALANLDKVKNGYHMQATIDLGDLGAIELP KKAIQKEGEQAYVLVNDFGTIIRRDVQVGQENGDKMAIESGLESADRVVISSKKPVKVGD IVESDAAIASDESATNESMTDASK >gi|237663585|gb|GG668933.1| GENE 49 54524 - 55231 263 235 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 13 232 7 217 311 105 32 7e-22 MEANNTNQPLIELRDINKFYPVGKEKLHVLKELNLTIHQGEFILIMGKSGSGKTTLMNII GFLDRLTDGSYHFSGTDVSKLSENKKSAFRNEYLGFIFQQFFLINSLNVSQNVQLPCVYE GKKSRAEKKAIAEKYLKIVGLETKAKSKVTELSGGQQQRVAIARSLVNDPLLIMADEPTG ALDSETGTEIMELLKELNEQGKTIVMVTHDEDMKKYASRVIHMKDGRFLEEEVIR >gi|237663585|gb|GG668933.1| GENE 50 55228 - 56457 273 409 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 12 407 15 410 413 109 26 5e-23 MIANLFVSTFLSLKAHKLRVFLTMVGIIIGITSVVTISALGEGMKHQVVKASSAVNADVL KIHYTMSDGSSDNFMSYEEPDYTFSRVDLKKLQDIQGIESIYPQYGESMMGGGDNLFVPM DYFGAQANLSITSTKGQNDILYGRDFQPSDANTDAIVLNHDIFETQIRLDDPSQLIGKAV SIGGYMYKVIGILAPKDLDSLGMNDDWATAMSSFVSRESYNKLAKTKAISGINIKVREGA DREAILGQAITILSENHPEVKGTFKENDQDQQLQQQMEEMVTGMTMFLMAITAISLLVGG IGVMNIMYVSVTERKREIGIRRAIGAKPRVILFQFLMEAAFITLIGGLIGVGCGYLLATV VGGYISITPIITPSIFAISTLVSVFTGIFFGIIPAIGASRMDPIKAIYN >gi|237663585|gb|GG668933.1| GENE 51 56512 - 57216 749 234 aa, chain - ## HITS:1 COG:no KEGG:EF0419 NR:ns ## KEGG: EF0419 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 234 1 234 234 429 99.0 1e-119 MIIFLLILCVLGFAYTNVFGRKVWHKFCMVIFGLGFLASLSLIVLNDKDHFGMTEVTQDK TFELKSSSASKDGPNMLLYQPLGDGSEKVYLYNTPDKKKLQKTGTENVTNTVQKDAQKAT LVQKTTKWSYQESWGKTLFGLADNDNQFAKQENTFNVASDWLVLSADQAKKLGEYMEQHA ADIKKEGTETVGKKMMAAMMANPSMSQEEQAKLTEQYTKEFQQELIQKILSDMK >gi|237663585|gb|GG668933.1| GENE 52 57216 - 58691 1738 491 aa, chain - ## HITS:1 COG:lin2733 KEGG:ns NR:ns ## COG: lin2733 COG0477 # Protein_GI_number: 16801794 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 4 484 7 487 493 514 60.0 1e-145 MTSQQPVDIHGKPYNRSLLVGVLLIGTFCTILNQTLLTTALPTLMKEFDISASSVQWLTT GFLLVNGIMIPISAWLINKFSSKKLYITAMSTFLIGTIICFVAQDFGMLLTGRLVQAAGV GVSMPLLQTIMLSIFPPEKRGAAMGTTGIVIGLAPALGPTLSGWIIDSYTWRDLFGMVIP IVVLVLILASFLMKNVIQLSNPSIDVLSVILSTLGFGSLLYGFSSVGDKGWGSPQVYGFL IVGAIVLCLFTYRQLHLEQPFLELRVFKSKVFTVAAILSGVTNMAMIGAEMVLPLYIQNI RGESAFHSGLMLLPGALVMGLMMPVTGRIFDKIGARRLAITGMFILTAATLPFAFLTKAT PIIYIIVLYAIRMFGISMVMMPVTTSGMNALPMNLLSHGTAVNNTFRQVASSIGTAVLIS VLTNVTKGGLPASDLLKTAPLAYRDQATNATLNGYHAAFFVATIFGVLGLAITFFLNKKE AMPVKEVGAMK >gi|237663585|gb|GG668933.1| GENE 53 58834 - 59301 598 155 aa, chain + ## HITS:1 COG:no KEGG:EF0421 NR:ns ## KEGG: EF0421 # Name: not_defined # Def: MerR family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 5 155 1 151 151 288 100.0 4e-77 MWSKMIQRLLNEENLLIGISELSEIAEVSPRQLRYWEEKGYISSIAKDANGPRKYRLHTV VKVHWIKRFLDEGYTLQSAVEKAEEQHRNVGMTKKIFSQMFHGISEVCPNYVAIDLGDFD EEQKLYVVFNETTEVSEYLLIPKDADVSDELKKRK >gi|237663585|gb|GG668933.1| GENE 54 59432 - 60184 927 250 aa, chain + ## HITS:1 COG:TM0065 KEGG:ns NR:ns ## COG: TM0065 COG1414 # Protein_GI_number: 15642840 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Thermotoga maritima # 11 250 4 244 246 123 34.0 3e-28 MKETKPYGTVLLKAAKIMDCLSLQPDQTLQEIAKNTEMTASTAIKILETLTLIGYVQKDT NKTYRLGTKLIRYANQSVEQIDLAEIAVPYLENLQNTVDETIHLGILNNNEILYINKLEP KNQTIRMSSKVGITRPLYNSAMGKAVLAEFSEEQVQQYLDTQTLIPYTENTITNPLRLKK ELKQVQQTGVAYDDEEIEQDIFCSGVSLMKDGEIAGAFSVSMPKYRLTEENKTTINQALL ATKAAIEAKL >gi|237663585|gb|GG668933.1| GENE 55 60345 - 60992 856 215 aa, chain + ## HITS:1 COG:SP0317 KEGG:ns NR:ns ## COG: SP0317 COG0800 # Protein_GI_number: 15900249 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Streptococcus pneumoniae TIGR4 # 1 206 1 206 209 222 53.0 4e-58 MKRVSILQKLENAGVIAVVRGKTKEEALKASQAIVAGGMRGIELTFTVPQATEVIQELVA LYKENPDVVIGAGTVLDATTARLAIVAGAEYIVSPSFDEETAKICNLYQVPYLPGCMTIT EMKEALKSGADIIKLFPGSVYGPRVISAFKAPLPQLNIMPTGGVSLENMAEWFAAGVTAV GVGGNLLAPAATGDFEKVREVAQAYMEKFQAIKGV >gi|237663585|gb|GG668933.1| GENE 56 60997 - 62004 956 335 aa, chain + ## HITS:1 COG:TM0067 KEGG:ns NR:ns ## COG: TM0067 COG0524 # Protein_GI_number: 15642842 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Thermotoga maritima # 3 335 2 339 339 223 40.0 4e-58 MGKVVTLGEIMLRLSTPVGIRVAQTENFAVHYGGGEANVAISLANYGHQVTFASKVPDNS LGEAAKKHLSRYGVSTEFVRTGGTRLGTYYLETGTGERAASVVYDRACSSFAQIEEMEWD LHELFSGVEIFHISGITAALSKTWQSMTVALVKAAKQAGCQVSFDINYRGKLWSQKEASV ALKAILPFVDICSAGVLDARYLLEIPEPEEELEDALTWYYRKMQERYPNIQVFYSTKRQV HSATDNELIGTLWYKGAYYTSKCHRLQPIVDRVGAGDAFAGGVLHGLLAAYDPQTCIDFA TAASALKHTVHGDCNQFSQKEVLAFLATGSGKINR >gi|237663585|gb|GG668933.1| GENE 57 62017 - 62856 1081 279 aa, chain + ## HITS:1 COG:BH2166 KEGG:ns NR:ns ## COG: BH2166 COG3717 # Protein_GI_number: 15614729 # Func_class: G Carbohydrate transport and metabolism # Function: 5-keto 4-deoxyuronate isomerase # Organism: Bacillus halodurans # 4 279 1 276 276 320 53.0 2e-87 MQNMETRYTHSPADIRHYSTEQLRDEFLVEKVFIPGAISLTYTHNDRMIFGGVTPTTEEL EIILDKELGVDYFLERRELGVINIGGPGFIEIDGAKETMKKQDGYYIGKETKHVRFSSEN PDNPAKFYISCVPAHHKYPNVKISIDEITPMETGDPLTLNQRKIYQYIHPNVCESCQLQM GYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRIFHMMGKPDETKHLVMSNEQAAIS PSWSIHSGVGTSNYSFIWAMCGENITYTDMDMVAMDQLK >gi|237663585|gb|GG668933.1| GENE 58 62878 - 63666 200 262 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 13 252 4 238 242 81 26 1e-14 MEFKMNDFQLDGKVALITGAVYGIGFEIAKSLAEAGATIVFNNLSPESVEQGLENYRAAG IEARGYVCDVTDEEQVQAMVAQIKEEVGSIDILVNNAGIIKRIPMVEMSAEEFRQVIDVD LNAPFIMAKAVIPDMIEKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYG QYNIQCNGIGPGYIETPQTAPLREPGHPFNEFILGRTPANRWGTPADLAGPAVFLASNAS DFVNGHILYVDGGILAYIGKQP >gi|237663585|gb|GG668933.1| GENE 59 63726 - 63926 326 66 aa, chain - ## HITS:1 COG:no KEGG:EF0439 NR:ns ## KEGG: EF0439 # Name: not_defined # Def: immunity protein PlnM, putative # Organism: E.faecalis # Pathway: not_defined # 1 66 1 66 66 88 98.0 7e-17 MRYLIGGIFLLISIWQFIVTGRTFSYLKKESGKRTSPFILLGLWSSLVFAIISFAVAIAS FFYVSF >gi|237663585|gb|GG668933.1| GENE 60 64032 - 65513 1451 493 aa, chain - ## HITS:1 COG:L104437 KEGG:ns NR:ns ## COG: L104437 COG3104 # Protein_GI_number: 15672684 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Lactococcus lactis # 5 493 2 497 497 510 55.0 1e-144 MSDKEQLEKLDKSFLGQPKGLATLFFTEMWERFSYYGMRAILMYYIYDTVANGGLGLPKA TALAIMSIYGSMVFMSSIIGGWVSDRVLGSRKTVFIGGLLIIAGHIVLATPFGVPALFVS IMLIVFGTGMLKPNVSGMVGHLYSKTDLRRDAGFSIFYMGINIGALIAPLVVGTLGQEYN YHLGFSVAAVGMFFGLLQYYFQGRKSLAGIGQAPTNPMSKEEQKKFAKAFMLAIVVALLI FGGAYVTGHLTIDFFINTISVLGILLPVYYFSKMLTSKDVTAEEKPKVLAYLPLFLAAIV FWSLEEQGSSILALFANERTQTSLFGFPIAASWFQSLNPVFVVILTPIFVTLWTKLGKRQ PSTVVKFSLGLVFAGLSFVLLMLPGILYGTEGRVSPLWLFFSFFIMIVGEMCLSPVGLSI TTKLAPKAFEAQTVAIWLLADAASQAINAQIARFYTPGTESAYFGIVGLVAVVAGILLFI VKKPIQNLMGDVR >gi|237663585|gb|GG668933.1| GENE 61 65506 - 65580 69 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNLHLSHFIIKYSEYYKNWSFIYE >gi|237663585|gb|GG668933.1| GENE 62 66331 - 66930 881 199 aa, chain + ## HITS:1 COG:no KEGG:EF0443 NR:ns ## KEGG: EF0443 # Name: not_defined # Def: LysM domain-containing protein # Organism: E.faecalis # Pathway: not_defined # 1 199 1 199 199 312 100.0 5e-84 MKSIKTILLGTTLAAGLGLFLGTDANAESLYTVKAGDTLSTISHQFAGDNSLIQKIASDN KLPNLDLIFEGEQLVIRSEKEVANTPAPAVEVAPVQQVVEQPVAQPVQQEVQQPVAQEVA QPAAPAASSDAKEWIAQRESSGSYDATNGQYIGRYQLSASYLNGDYSPANQERVADQYVA GRYGSWDAAKSFWLANGWY >gi|237663585|gb|GG668933.1| GENE 63 67000 - 67290 193 96 aa, chain - ## HITS:1 COG:lin2484 KEGG:ns NR:ns ## COG: lin2484 COG2050 # Protein_GI_number: 16801546 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Listeria innocua # 4 96 31 123 123 75 36.0 3e-14 MHKQPYGLVHGGLNGVLIETACSLGANENVPENTFAVGIDLQVNHLRSVHDGSLTVIATP DHSGKTLQVWEAKIYNADHQLTSVGRCTLTNRQKKQ >gi|237663585|gb|GG668933.1| GENE 64 67545 - 68360 1093 271 aa, chain + ## HITS:1 COG:lin1781 KEGG:ns NR:ns ## COG: lin1781 COG0447 # Protein_GI_number: 16800849 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Listeria innocua # 3 271 4 272 272 461 81.0 1e-130 MRNWTTIKEYDEILFEQEGKVAKITINRPHVHNAFTPKTVMEMIDAFNISRDKEDVGVII LTGAGDQAFCSGGDQKVRGNGGYVGEDNIPRLNVLDLQRLIRVIPKPVIAMVKGWSIGGG NVLQLVCDLTIAAENAKFGQTGPNVGSFDGGYGSGYLARVIGHKKAKEVWFMCKQYSAQE ALDMGWINTVVPLDQVEDVTMEWAEEMLTKSPIALRMIKASLNADTDGLAGVQQLAGDAT LLYYTMAEAQEGRDAFKEKRTPDFDQFPKFP >gi|237663585|gb|GG668933.1| GENE 65 68365 - 69822 1210 485 aa, chain + ## HITS:1 COG:lin1780 KEGG:ns NR:ns ## COG: lin1780 COG0318 # Protein_GI_number: 16800848 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Listeria innocua # 3 474 6 463 469 378 42.0 1e-104 MTWLNKQVQKRPDHPAFYFQDESWTFLEVQQEVSHWVATYQQVLAPEEKRVALFSKNSKE LYFSILALWELGKELLFLNTHLTLAELTFQLKDAQVKTIIGAPETQALLEEISFVDVQPM IKKQHSLSHQEFQQPSDLESVASIMYTSGTTGQPKGVLQRFKNHLASARGTQENMGITAE DCWLCAVPLFHISGLSIVVRQLVLGCSIRLYDKFDEQQVTQDLQEGRGTVISVVATMLQQ LLSVYPEAGYSASFKGMLLGGGPIAPDKLAQCEEKGIPVIQSYGMTETCSQVVALKFEDA ALKIGSAGQPLKDMQIKIVDELGQEQPEKQVGEILLKGPNVVSGYLNHRQPEKWTADGWF KTGDMGYLDAQGYLYLVSRLSELIISGGENIYPTEVEQVLQAITGIKAAAVVGEPDVQWG AVPVAYVISDQELTLAQIQDQCSRKLAKYKRPKRIYFCHSFPQTASGKIAKHRFMTEERE AFLIR >gi|237663585|gb|GG668933.1| GENE 66 69819 - 71186 1364 455 aa, chain + ## HITS:1 COG:lin1784 KEGG:ns NR:ns ## COG: lin1784 COG1169 # Protein_GI_number: 16800852 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Listeria innocua # 2 453 4 459 462 309 37.0 6e-84 MKLPDELRQAYQKNARQFSWVFPLETEQTALAIFAAGEKAYQGERFFWQTPKKDFALVGF GYETILKGAETETHQLNNFLKKEAATRFQNMSISGTGALLFGGLPFDTEQTPTEAWGELG EGWFYLPSILFTFSGSRIYGTLNFSGSSEQEVEERWSTLVAQFDRLLATCEELPAVAETK IDKEEVAVTEWLQAVNETVAVLREDGPLKKVVLARQLAVSSPEKIRSNQVLVNLMAQQQN TYLFALEANDTSFIGATPERLLLGTKEAFATACIAGTIKTGQTPEETKALGAQLLQDRKN TGEHQIVVERLAKELAKMTTSENSIQAPIILENRDVQHLYVPISGQRKPGISFLESVMQL HPTPALGGEPKELAVEWIRQYEPGSRGLYGAPIGWISGNDDSGEFAVALRSGVFAGQQGV LYAGCGIVADSQAELEREETKIKFQPMLRGIGGQV >gi|237663585|gb|GG668933.1| GENE 67 71186 - 72919 1612 577 aa, chain + ## HITS:1 COG:lin1783 KEGG:ns NR:ns ## COG: lin1783 COG1165 # Protein_GI_number: 16800851 # Func_class: H Coenzyme transport and metabolism # Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase # Organism: Listeria innocua # 2 565 3 573 580 504 45.0 1e-142 MNHQETMTDYLTAFIEGLKNSGVEQAVISPGSRSTPLALLLHRETAIQTFVDVDERSAAF FALGLSKASQKPVVLLCTSGTAAANYYPAICEANISHVPLVVLTTDRPHELRQVGAPQAM DQLQMYQNHVKLFVEMALPEATEEMLNYAYWQGAKGAAFAQQTPAAPVHLNFPLREPLLP DLERKTKSSQQTALFAGQSILSTEQVQHLADQWYQKNGVLVVGGSHTEEEAALFIQLAEA LQWPLLADPLANIVTHGQNSEVVIAHSDLFLNVTTLPQEPEVVVRFGSLPISKNIMLWLK RLTTTETTFYFVDENGQWQEQLKKSQTVIQAKETTFVEQLLTVVKPTEATWLAQWLLLEK TVSEVLLETLNATELNETTASLAVHQTMKENGQLFVSNSMAIRYLDRFMDSRPYRMFGNR GINGIDGIVSTALGMSAVAPTQQNVLLIGDLALYHDMNGLFLAKRYQLPLTIVLLNNNGG GIFSFLSQRTLREDDFEPLFGTPLDLDFSLVAELYGASYQEVKTIAELKQILQTAAEEPQ FQVIEVKGNRQENVHLYESILAEIGRRVERQGISWNG >gi|237663585|gb|GG668933.1| GENE 68 72907 - 73731 802 274 aa, chain + ## HITS:1 COG:BS_ytxM KEGG:ns NR:ns ## COG: BS_ytxM COG0596 # Protein_GI_number: 16080133 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Bacillus subtilis # 25 270 27 271 274 190 39.0 2e-48 MERLIRGMQYHYQWLTPFDAKRTTLVCLHGFTGTLATFAAVFPSQTPYNVLGIDLPGHGA TASLVAPERYTMKQVCHDLAELTESLNLPCFCLLGYSMGARTALGFALHYPQKVQQLLLE SGSPGLATAAERQARICQDHRLAERLLEEPLVDFIDFWQELPLFQTQKALSVAQQMAIRQ ERLSQSAFGLASSLWYMGTGAQESYWERLAELQPIPTDLLVGGEDQKFIGIAKKMQARQP LLRLTIFPEAGHCIHLEQPTIFYEKVTALLEGAI >gi|237663585|gb|GG668933.1| GENE 69 73732 - 74835 1103 367 aa, chain + ## HITS:1 COG:lin2664 KEGG:ns NR:ns ## COG: lin2664 COG4948 # Protein_GI_number: 16801725 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Listeria innocua # 1 362 1 362 374 370 50.0 1e-102 MNIQSIETYQVRLPLKTPFVTSYGRLEEKAFDLFVITDEQGNQGFGELVAFEQPDYVQET LVTERFIIQQHLIPLLLTEAIEQPQEVSTIFEEVKGHWMGKAALETAIWDLYAKRQQKSL TEFFGPTRRKIPVGISLGIQEELPQLLKQVQLAVEKGYQRVKLKIRPGYDVEPVALIRQH FPNLPLMVDANSAYTLADLPQLQRLDHYQLAMIEQPFAADDFLDHAQLQIELKTRICLDE NIRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIATFCQENDLLVWLGGMFESGVGRA LNLQFASQPTFSFPGDISATERYFYEDIITEPFVLEQGTMTVPQGLGIGVTLSQTNLLKY SQYQKIM >gi|237663585|gb|GG668933.1| GENE 70 74892 - 75590 759 232 aa, chain - ## HITS:1 COG:yieK KEGG:ns NR:ns ## COG: yieK COG0363 # Protein_GI_number: 16131586 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Escherichia coli K12 # 24 225 1 209 213 214 50.0 1e-55 MKILIKQDFDAMSEWAKMLLLSTMSQDKRVNLSITAGKTPTLVYQKLASIVKNSSDFDNV HYYNFDEIPVPHQKEGITLTDLRTLYLTPAEISEQNIHPLTVENFQQQEQRIADAGGLDL MLIGLGADGHFCGNMPTTTHFKNETYQVTVTGSEPWFVPEMMQPGMTFVTMGPASIMKVK HLVLIVNGEQKAQMVKQVLQGPVTETYPASILQLHPNLTVLLDEAAASQLEK >gi|237663585|gb|GG668933.1| GENE 71 75842 - 77368 1519 508 aa, chain - ## HITS:1 COG:lin0373 KEGG:ns NR:ns ## COG: lin0373 COG0365 # Protein_GI_number: 16799450 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Listeria innocua # 7 507 6 508 508 645 59.0 0 MTHLLDYQPLNLYTNYQEAAEKTPTVPIIFDESLPAFPALGLETTYGESHQEILKRAYQL AALGVKKGDKIIIYKSPKFDTYLLAVAASYLAAVPVMVSYHLPFETIEVFVDRLEDPYIL FDDVTAEKVQAVRNSSSNKKLSVASLLEADATEVPQDELTKDEIAYMTHTSGTTGIPKLI CHSNHSMGWRTKWQKTIFTKIAEKKLVGFHISPVHSRFNIGVSSLMAMGFPMMPLANASS EKVAEMFSTYQPIAVETHPNNFVQWVRLAKEKPEAFASVHYYHSTFDAINNATMVAFLKA SAANEPIFLQVYGQSECGPMILRAHTLESLKDSDARDMGVGLEDLTQARITDEKGQVLPA MTDGHIQFLSKGRALTYYKEDARFAENVYGEWWDSGDYGMLDERGHLFLKDRQVDLIENI DSNLAIEDHLLDALDFLEEVIIVRGKENEPQPILAVVPGEEMDWDAWWTQVADLPHLNEP IIMAFDEIPHTATMKVQRLQLEKWLKEQ >gi|237663585|gb|GG668933.1| GENE 72 77589 - 77990 522 133 aa, chain + ## HITS:1 COG:lin2302 KEGG:ns NR:ns ## COG: lin2302 COG1764 # Protein_GI_number: 16801366 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Listeria innocua # 1 132 1 137 138 152 59.0 1e-37 MKKIYETTIINTGGRAGEVHSPDKSFSYAVASPGVKKENTTNPEQLFAAAYSACFNGALE LVMDQEKVEGKSTVTARVSLFQGEDGFSVGAELEVHIDGVDQAKAEELVKKAHEICPYSK ATRNNIDVKLTVI >gi|237663585|gb|GG668933.1| GENE 73 78034 - 78813 586 259 aa, chain - ## HITS:1 COG:lin0630 KEGG:ns NR:ns ## COG: lin0630 COG0730 # Protein_GI_number: 16799705 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Listeria innocua # 4 252 3 243 246 67 26.0 3e-11 MRVLLIYFITIFLSNTVGALSGMGGGVIIKPVLDFLGFHSLNSIAFYSSVAVFVMSISST YKQYQNGVQIEWKKAASISFGSLVGGMLGDLLLNQAIALAPNEEKVQLIQYIIMLLTLVL VLLYNQFSNWHLHLNGLSIFLIVGLGLGILSTFLGIGGGPINVACLILFFGMDIKSATVY SIITIFFSQLAKLGNIGLTTGFAVFDLTMLWAIIPAALFGGYVGGLFSKKLSQQRVAQIY SLVVFLVILLNMYNLWTVI >gi|237663585|gb|GG668933.1| GENE 74 78974 - 79777 981 267 aa, chain + ## HITS:1 COG:lin0022 KEGG:ns NR:ns ## COG: lin0022 COG3715 # Protein_GI_number: 16799101 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Listeria innocua # 1 267 1 267 267 216 47.0 3e-56 MTVSIGIILILCLYTVVGVLDQISIQIGPYTPLFAATFTGLVLGDVQTGLMIGATLQLMT LGVATYGGATVPDFLSGAIMGTAYAIISGKGAEYGIGVAVPIGLLLTQLDILGRMANTFF QHKADRYAEEGNYKGVERCNVLGIFPWTISRVIPVFIGLAFGEQVVNAINNWIPIWVMNG LKAAGAILPAMGIAILMRYLPIKTYWPYFIIGFVLLAYGAQFFSVLGVALVGLALAAIYV MNHNKGGAATTSGTVIYEDDEEVEIDD >gi|237663585|gb|GG668933.1| GENE 75 79770 - 80588 1010 272 aa, chain + ## HITS:1 COG:lin0023 KEGG:ns NR:ns ## COG: lin0023 COG3716 # Protein_GI_number: 16799102 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Listeria innocua # 5 262 16 272 275 207 45.0 2e-53 MTNKLTKKDINKVYVRNLFGYQWGWNYEKMQGLGYAWVMMPALKRLYSEDPVAMKKALKT HLGFMNTTPAMSHLIVGADMALEEEVGIEDETAITGLKTGLMGPFAGVGDTIFIAIYRAI VFSIAAYMAQGGQVVGLLIPLIAGAVVLWVRYKFTWIGYHQGKKIATEFADKMKLFTQGA AILGLTVVGGLIPSVITYKLDLTYKMGDVTLSVQEMLDKILPALIPLGIVLLSYWLLGKK KMNSTRLIFVLILIGMVLGNLQPMLAWVGGLF >gi|237663585|gb|GG668933.1| GENE 76 80619 - 81095 693 158 aa, chain + ## HITS:1 COG:lin0021 KEGG:ns NR:ns ## COG: lin0021 COG3444 # Protein_GI_number: 16799100 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Listeria innocua # 3 148 6 151 162 142 54.0 3e-34 MTIVHARVDERLIHGQVATVWTNTVGAQRIMVVNDAAVKDQLQIGALKMAKPAGVKLSIL SKRKAIEKILAGNYDEEKVFLITKDIADMAALIDGGVPLQSFNVGNISQKEGSRAIKKSV ALTDEDIQTVRRLTDNGVTITAQMIPSEPNEAILTFIK >gi|237663585|gb|GG668933.1| GENE 77 81112 - 81963 594 283 aa, chain + ## HITS:1 COG:L147291 KEGG:ns NR:ns ## COG: L147291 COG1737 # Protein_GI_number: 15673115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 1 283 1 283 283 124 28.0 2e-28 MEPIRSIRQKYKDFSKVNKRIADYILKDPTRLLSLTANEIASNSETSPASVTRFSKQLGF DSWEELKLSIAAVQAASNGKKDIDPIVAADDSVDTICMKVESLLNATIEDLFYTVDKQAL ERAIAHVKKAEKIHLVGIGASSLTTYNLYHKFNRAGRQAIFNYDSHMMLEFLNYATAQDI LITVSYSGLTKEALIACEIAKNRGATVIFITSNDGENVRSLSDEVLLVPNNEHLIRVGAI SSIASSMAIGDVLYLGSIQDDLDTEIERNMIETSQLVSRLKEK >gi|237663585|gb|GG668933.1| GENE 78 81978 - 82868 976 296 aa, chain + ## HITS:1 COG:YPO2925 KEGG:ns NR:ns ## COG: YPO2925 COG2103 # Protein_GI_number: 16123112 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Yersinia pestis # 1 295 1 295 295 280 50.0 2e-75 MNLEGLTTEARNEATKKIDQVSTLEMVTLINQEDQKVAQAIEKVLPQIAAAIDAAAERFK KGGRLIYCGAGTSGRLGALDAIELTPTYSVSPERAFGILAGGEKAMYQAIEGAEDSKELA IEDLTQHQLTARDVVIAIAASGRTPYAVSAIEYGKKVGALTISVTCNNQSPMNQLAEIGI APIVGPEVITGSTRMKAGSAQKMVLNMFSTGIMVKVGNIYQNLMVNVQPTNEKLMQRATN IIKEAAEIEESQAKEYLEAAQLEVAPAIVMAKAHVDFQKAKQLLAEHDGRISEVLA >gi|237663585|gb|GG668933.1| GENE 79 82881 - 83870 994 329 aa, chain + ## HITS:1 COG:lin2030 KEGG:ns NR:ns ## COG: lin2030 COG1680 # Protein_GI_number: 16801096 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Listeria innocua # 7 329 6 326 335 172 33.0 6e-43 MNQIAIQETIQRLINQQVVPGVAWGTITEDSLSEQYTGFLGNTGPFARQKVSSASLYDLA SLTKVIGTTNRMLQLIDTNQLAFSTTVGEILPTYQGLSCSIGELLLHQSGLPADVADKKN VTKKSLQEIILTHSLSERGKTIYSDLGYYLLGEIIQVLDRCSLEESFQTYVFQPMNLQHT SFTVSDFAQAVPTEITKQRGVIQGVVHDSKAYQLKAPIGSAGLFATLPDLLTFVQCFMNN RYPSGKPLFSEKMFDALWSMNQGGRTFGWEVKKTQAGVDYLYHTGFTGTAIGMKKETKEA LILLTNRVHPTREERGFLKARTKIYQQYF >gi|237663585|gb|GG668933.1| GENE 80 83880 - 84299 553 139 aa, chain + ## HITS:1 COG:SP0064 KEGG:ns NR:ns ## COG: SP0064 COG2893 # Protein_GI_number: 15900009 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 1 138 1 134 134 70 36.0 1e-12 MKPKLILMSHGRMAEETLASTQMIVGELADAAIVSMTAEDGLSGTQAKLAAILKEAGNVP TLVLADLKGGTPCNVAMMAMGTYPQLRVVAGLNLAMAIEAAVSPVENVDELAAYLTQIGQ SAVTTIDLPELTDEEEFEE >gi|237663585|gb|GG668933.1| GENE 81 84333 - 85142 830 269 aa, chain - ## HITS:1 COG:no KEGG:EF0462 NR:ns ## KEGG: EF0462 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 269 1 269 269 499 99.0 1e-140 MNTLQLFKQAFFSVSELRHAKKMAFWKVILYAVFLSAILALPITKQVFSVLQEVQQDGQK IAEKLPDFSIENGTLQTRAKESGFIYQTDSIIFTFDPDGKRTAADVQKDLIGNAFGLAFL QDEFVVALPNSGATESILGTDQFIFPYSKGTLDGVNAQSIKTALSEAAIPWWTKLIVFLV AIYPVLIGLVLDLLIAAIGASLYSKLRFYSLRLIDCLKIITYCATVPVILSAILNFVNPM FNDGILVILLSLFFFFVTTKNEPRNIPGS >gi|237663585|gb|GG668933.1| GENE 82 85336 - 85944 757 202 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 202 1 201 201 296 67 4e-79 MTYTLPELPYAYDALEPYIDVETMHLHHDKHHNTYVTNLNAAIEKHPELGEKSVEDLISD MNTIPEDIRTAVRNNGGGHANHTFFWEIMAPNAGGQPTGAIKEAIDETFGSFDEMKAAFK TAATGRFGSGWAWLVVNNGKLEITSTPNQDSPLMDGQTPVLGLDVWEHAYYLKYKNVRPD YIEAFWNVVNWDKVNELFVAAK >gi|237663585|gb|GG668933.1| GENE 83 86092 - 87072 1017 326 aa, chain + ## HITS:1 COG:lin2126 KEGG:ns NR:ns ## COG: lin2126 COG0253 # Protein_GI_number: 16801192 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Listeria innocua # 3 325 4 323 329 279 46.0 7e-75 MNVMMQKVHGSENDFFLLDETQFERSLTAEEIEQLRIQLCSRETGLLAGADGLLLVGEGT HGTSNARMRVINSDGSEASMCGNGLRTVARYLAEKNQEKSFTVETMFADLKVRQAPNLAE EVATYQVEISPVSFEAVTIPMHLGVQTLIDEIVPALSNTIRFTAVAVPNPHLVAFVDHET LNGPEFERIATYVNNENPYFPEGINVSFVEILGKNQLFVRTYERGVGFTSACGTAMCASS LLYTLLKDGVFYEEITVKNAGGMVKTVVHETSDGSYWMELIGNATITHLIEGSLTDLLNG AFEKITITETNEQKHYQEFLQTLSQK >gi|237663585|gb|GG668933.1| GENE 84 87222 - 88430 1369 402 aa, chain + ## HITS:1 COG:BH3670 KEGG:ns NR:ns ## COG: BH3670 COG1316 # Protein_GI_number: 15616232 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 5 305 2 303 304 234 42.0 2e-61 MKLWKKVVLGFLSVLLVVVAGVCAYGIKMYSDANSTINGIYQSVNRKSNKGATANIDAQE PFSVLLMGIDTGDLGRTEQGRSDTTMVVTINPKENKSTMISLDRDILTDIVGNDTQDKLN HAYAFGGAEMAINTVQELLDIPIHHYVSINMKGLKDLIDAVGGIEVDNTIGEFTLDGITV PAGKIKLDGTTGLAYARMRHEDPEGDVGRQRRQREVVEKIVRKVMSFDGVSKYRKILDAV EANVKTDLTWDDMMDIQSKYLSAFKTIDSEQLQGYSATIDDIYYQVLDPNSLYKTQTTLR KQLGLKEHASEREKDLAFYNQFSYAVTDTALIGESGDSSANSSTSSSSTADTTAGQTEYN GNTQQAAEGAYDPNTYVDPNTYTDPNAYADPNTYVDPNAPQY >gi|237663585|gb|GG668933.1| GENE 85 88560 - 89261 1106 233 aa, chain + ## HITS:1 COG:L14408 KEGG:ns NR:ns ## COG: L14408 COG0363 # Protein_GI_number: 15673555 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Lactococcus lactis # 1 233 1 233 235 295 63.0 4e-80 MQIIRVANAEEGGKKAFELIKEGMNNGAKVLGLATGSTPETLYKEMTASDVDFTEMTSVN LDEYVGLGGEDEQSYRYFMNKHLFDKKPFKETFVPNGKAEDLDAASAEYEKIIDTHPVDI QILGIGQNGHIGFNEPGTPLDSLTHVVELTESTINANKRYFDKVEDVPTRAVSMGIGSIM KGKKMILMAYGEAKAEAIKGMIDGPVTTDMPASALQNHQDVVVIIDDAAASKL >gi|237663585|gb|GG668933.1| GENE 86 89357 - 90058 956 233 aa, chain + ## HITS:1 COG:FN0215 KEGG:ns NR:ns ## COG: FN0215 COG1285 # Protein_GI_number: 19703560 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Fusobacterium nucleatum # 3 229 13 242 244 139 37.0 5e-33 MLQLTIPEIILRLVLAMVMGGAIGFERQYKNRPAGMRTHILVCMGAAIIALIQSQIAINA LKDALANPALTGVIRSDQTRLIAQVVSGIGFLGAGTIIVTKQSVTGLTTAASLWTVAGLG IAVGMGYYTIALTSFIGVLFALTIVKRIIHVPTIKKLEIRYQHKQETKEFINQYFEEKHI EIYDVNFNVSWVDDTKIYTNIYTIDLPKGLTYADVIEDLSVSNNVTKLRLINV >gi|237663585|gb|GG668933.1| GENE 87 90428 - 90997 727 189 aa, chain + ## HITS:1 COG:TM0961 KEGG:ns NR:ns ## COG: TM0961 COG1704 # Protein_GI_number: 15643721 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 26 188 32 193 193 139 46.0 2e-33 MNKKNKFLSIIVVVVVIIGAFVMKAYNQLITLDNKVEAEWSQVENVMQRRADLIPNLVSS VQGSMTQEKEVLKEITEARKAYAGAKSSSEKGQANEQIEKGLGNFVTVLNENYPKLASSE NVKTLMTQLEGSENRISVERRNYIQAVETYNQQISKFPDKIIAKLLGFEKKTNYVATEQG KEVPQVKFK >gi|237663585|gb|GG668933.1| GENE 88 91043 - 92329 1095 428 aa, chain + ## HITS:1 COG:BMEI0229 KEGG:ns NR:ns ## COG: BMEI0229 COG1512 # Protein_GI_number: 17986513 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Brucella melitensis # 118 262 28 170 253 89 33.0 1e-17 MDKKVEKIQEKVRLFYKKHQRNTTIVVVISLSMILILGMAAWHEGKGISYEAKQTALREK QQVLQKKRDDILAGKMTEASTQTTINNFSKQEITGENELVTITGTNGQLNINDANIYVSD NAGIVSNQLKQKMFQLNQQLLKNANGAQFMLITVPALPSGESVESYSNKIANQLGVGDRE KNNGVVFLMAIEDRESRLEVGYGLESILTDSYADDIINNEEVKEAFRDEDYNTGLNKIID QVSAAINSKTAQVDNELTNIQTELNTNTTKRNVLLMASIAGMLICAVYILQILRTRKLVK KMYQDYLNCLPTKAVLNNSEQTKKVLNKMKKTSFYCLYLNGATLFATKGKIRRATKRGSL LSIYPNAKKQSFGRLLVGDTLYSYDGSVLTYAYLNSQYNPSNHSSSGSGSGGSFGGGSFG GGGASGSW >gi|237663585|gb|GG668933.1| GENE 89 92369 - 93334 1162 321 aa, chain - ## HITS:1 COG:SP1180 KEGG:ns NR:ns ## COG: SP1180 COG0208 # Protein_GI_number: 15901045 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 319 1 319 320 529 85.0 1e-150 MATYYEAINWNAIEDVIDKSTWEKLTEQFWLDTRIPLSNDLDDWRTLSDLEKTTVGYVFG GLTLLDTVQSESGMDQLRNDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIDDI FEWTNTNKHLQYKAERINEIYKNGTPLEKKIASVFLETFLFYSGFYTPLYYLGNNKLANV AEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEELY DDLGWTEEVKTFLRYNANKALMNLGMDPLFADTANDVNPIVMNGISTGTSNHDFFSQVGN GYLLGTVEAMKDDDYLYGLDK >gi|237663585|gb|GG668933.1| GENE 90 93535 - 95694 2229 719 aa, chain - ## HITS:1 COG:SP1179 KEGG:ns NR:ns ## COG: SP1179 COG0209 # Protein_GI_number: 15901044 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 719 1 719 719 1144 77.0 0 MSLKEIKDVSYFKLNNEINRPVDGQIPLNKDKEALAAFFKENVEPNTRKFSSAEEKINFL MKEDFIETEFIEKYSMDFIEKLYAFLDEQHFQFKSFMAAYKFYSQYALKNNAGTEYLETY EDRVAFNALYFADGDEELALTLADEMIHQRYQPATPSFLNAGRKRRGELVSCFLVQVTDD MNSIGRSINSALQLSRIGGGVGITLSNLREAGAPIKGYDGAASGVVPVMKLFEDSFSYSN QLGQRQGAGVVYLNVFHPDIEMFLSAKKENADEKIRVKTLSLGVIVPDKFYELTRNNEDM YLFSPYSVEREYGVPYSYVDITKEYDNLVANPNIRKRKIKARDLENEISKLQQESGYPYI INIDTANKNNPIDGKIIMSNLCSEILQVQTPSVINGKQEYEVLGTDISCNLGSTNIVNLM ESPDFGKSVRAMTRALTFVTDASEIDVVPTIQNGNRLSHTIGLGAMGLHTFFAKNHMEYG SEESLDFTDIYFMLLNYWTLMESNQIAKERNQVFHNFEKSDYASGAYFDKYIEGNFTPKF DKVKEIFKDIQIPTAEDWAALRDAVKKDGLYHQNRLAVAPNGSISYINDTSASIHPITRM IEERQEKKIGKIYYPAPYLANDTIPYYTSAYDMDMRKVIDVYATAQQHVDQGMSLTLFMR SEIPEGLYEWKETPKQTTRDLNILRHYAFNKGIKSIYYIRTFTDDAEEIGSNQCESCVI >gi|237663585|gb|GG668933.1| GENE 91 95675 - 96052 245 125 aa, chain - ## HITS:1 COG:L4702 KEGG:ns NR:ns ## COG: L4702 COG1780 # Protein_GI_number: 15672958 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Lactococcus lactis # 1 121 1 129 140 112 43.0 1e-25 MKLVYFSVTGQTRRFIKKLDLPAYELEPANPFFEINEPFILVIPTYDAEITEVVNDFLDY KSNQELLVGVAGGGNRNFAELFVYTAKDIARDYHVPLLYSFEFSGTDEDVETFKKVVEEI ESKRN >gi|237663585|gb|GG668933.1| GENE 92 96054 - 96278 353 74 aa, chain - ## HITS:1 COG:SP1178 KEGG:ns NR:ns ## COG: SP1178 COG0695 # Protein_GI_number: 15901043 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Streptococcus pneumoniae TIGR4 # 3 73 2 72 72 85 53.0 2e-17 MNVKIFSKNNCIQCKMAKRFLSENNIAFEEINIDAQPDAIDWLKEQGFQSVPVITSEATT VVGFRPDQLKQLAS >gi|237663585|gb|GG668933.1| GENE 93 96792 - 97265 577 157 aa, chain + ## HITS:1 COG:L192240 KEGG:ns NR:ns ## COG: L192240 COG1918 # Protein_GI_number: 15672170 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Lactococcus lactis # 1 151 1 148 152 102 36.0 4e-22 MITLAQAEVGKVYTVESVQADVQTKKHLNNLGVVAGQAVVLVNYQNQNGIVLLHNSRIAL TDTILQAIHVEERSANEKVWVSLDTLKVGERATIVGIHGQGAVKRRLMDMGLTKGTVIFI RKVAPLADPIEINVRGYELTLRKSEAELILVEKEESE >gi|237663585|gb|GG668933.1| GENE 94 97262 - 99412 2102 716 aa, chain + ## HITS:1 COG:L190009 KEGG:ns NR:ns ## COG: L190009 COG0370 # Protein_GI_number: 15672169 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Lactococcus lactis # 5 701 4 702 709 817 56.0 0 MTQQIALAGNPNSGKTTTFNMLTGANQYVGNWPGVTVERKEGVAKKDKTLIIQDLPGIYS LSPYTPEEIVARDYLLEDQPSVILNILDVTNLERNLYLTTQLIETGLPVVCALNMMDLLE KNGQTLNSEKLSYGLGVPVVEISALKNRGLDHALKQSKQRANAIETEVIYPSYDNRLEAA LAEIVDILGNTVPETQQRWYSLKLFERDVRTKEQLLLSSFQEKEIEEVIQITEKIFQDES EAIIINERYAFIARLIALCATKKTEMTFTHSDKIDRVVTNRWFALPIFAFVMWLVYYLSI QTVGTMGTDWLNDVFFGEWVPQFVGNWLAQWQVAPWMQSLILDGIIAGVGAVLGFLPQLA VLFLCLGFLEDCGYMARIAFVMDRLFRKFGLSGKSFIPMLIATGCGVPGVMASRTIENER DRRMTIMVTTFMPCSAKLPIIALIAGAFFPNQSWVSPSAYFLGVASIVLSGIALKKTKHF SGDPAPFIMELPAYHLPQLRSVVRHAYERCRSFVKKAGTIIFVSSILIWFMSHYSVTFQP VPESQSILAFLGKGLAVLFIPLGWGNWQGAVATITGLIAKENIIGTLGILFGNVKDVSEN GVEVWGALQHTFTPVAAYSFLTFNLLCAPCFAAIGAIRREMGDLKWTLGAIGYQCGLAYM VSFVIYQLGHVLVEKGTLTLGTFLAMGVVLAGFYFLIRKPKPGKESVQAITSLERG >gi|237663585|gb|GG668933.1| GENE 95 99419 - 99556 236 45 aa, chain + ## HITS:1 COG:no KEGG:EF0477 NR:ns ## KEGG: EF0477 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 45 1 45 45 74 97.0 1e-12 MATIILSILIFGTAGIITYRRIKKGRSCEDCQTACPVKKEQSSQE >gi|237663585|gb|GG668933.1| GENE 96 99832 - 101001 797 389 aa, chain - ## HITS:1 COG:mlr0475 KEGG:ns NR:ns ## COG: mlr0475 COG0582 # Protein_GI_number: 13470699 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mesorhizobium loti # 139 385 147 388 399 119 31.0 1e-26 MKLRANIIEKRGTLQVIVSYKDSNGKIRQKWKDTKLKKKGNKKRAEKIRDEFLLELESQL AMECECANPDLLFYDYLLNYLEVSKKQVAFNTYVGYKHYVHNRIYKFFYPKKIKLNRLKP YHLQDFYQYMLNDDCTANTVIHYHAFIRKALQEAVITELISTNVADKVRKPKKKQFVSQV YNQHEILKLLDILSEEKLYLVVLLTAFYGLRRSEVLGLKWSAIDFFNKKIVINHVIIENP ENMSQLIKKDQTKNSSSYRTLPLVETIERALVNQAKWQQDNRILLGDDYILEDNEYVFTM EDGRLMKPQYVTHRLSKLIKKNGLKKIRFHDLRHSNASIMLDSGQNMKSIQEWLGHASYS TTANLYTHLTAGVKDRAAEALENAFGFKE >gi|237663585|gb|GG668933.1| GENE 97 101045 - 101275 244 76 aa, chain - ## HITS:1 COG:no KEGG:EF0480 NR:ns ## KEGG: EF0480 # Name: not_defined # Def: excisionase, putative # Organism: E.faecalis # Pathway: not_defined # 1 76 1 76 76 119 98.0 3e-26 MDFQDYEKIFESYPSILKITDLTKMLNIGKNKAYNLLKDKSIENIKIGARYKIPKKVVIE YILKIQDEGKNHAIIE >gi|237663585|gb|GG668933.1| GENE 98 101586 - 101696 163 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSNEIANITIIRETLQNYTANEISKHTGLNLSTIKN >gi|237663585|gb|GG668933.1| GENE 99 101733 - 101813 60 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMLFVSLNLVLKIIEKVLKSTYGSNS >gi|237663585|gb|GG668933.1| GENE 100 102131 - 102373 152 80 aa, chain - ## HITS:1 COG:no KEGG:EF0481 NR:ns ## KEGG: EF0481 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 80 1 81 81 134 98.0 1e-30 MVDNKKRQYPLVPLSVIQSALEEDPISIKMILKHYHSYIVKLCLTNGFNEAEQFITYVDE YMLRQLEIKLIEAILKFKIN >gi|237663585|gb|GG668933.1| GENE 101 102367 - 102642 266 91 aa, chain - ## HITS:1 COG:no KEGG:EF0482 NR:ns ## KEGG: EF0482 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 91 43 133 133 170 98.0 2e-41 MTDSTEGKYSQTHFDEQDVYFLFGMEILISDQKLSTAIDHLSEIRRKVILLYYFAGFNNT EIGKILNMSTSGIWYQRKKAVEQLKTEYDLW >gi|237663585|gb|GG668933.1| GENE 102 103045 - 103152 161 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQQNYNEKSIQHQFDAYCKKVLRNELKLFENETLE >gi|237663585|gb|GG668933.1| GENE 103 103183 - 103323 65 46 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255973547|ref|ZP_05424133.1| ## NR: gi|255973547|ref|ZP_05424133.1| LOW QUALITY PROTEIN: predicted protein [Enterococcus faecalis T2] LOW QUALITY PROTEIN: predicted protein [Enterococcus faecalis T2] # 1 46 4 49 49 76 100.0 6e-13 MKLSTLTHFDEQDIYFLFGMEILISNKKLSIAKPVIGHKKFFILQV >gi|237663585|gb|GG668933.1| GENE 104 104021 - 104149 102 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTDDSLLITECILHSTHLFYYLKIYTNNYNHNYRVKGYSLLC >gi|237663585|gb|GG668933.1| GENE 105 104473 - 104749 304 92 aa, chain + ## HITS:1 COG:no KEGG:EF0485 NR:ns ## KEGG: EF0485 # Name: not_defined # Def: aggregation substance # Organism: E.faecalis # Pathway: not_defined # 1 92 1 101 1305 124 76.0 1e-27 MKQQMKAKKQYKTYKAKNHWVTVPILFLSVLGAVGLATNNVQAAELDTQPETTSIQSDNH NSQTVSETTVQKDTTSQPTKVEEVASEKNGAE Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:22:08 2011 Seq name: gi|237663584|gb|GG668934.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD13, whole genome shotgun sequence Length of sequence - 129182 bp Number of predicted genes - 120, with homology - 115 Number of transcription units - 54, operones - 30 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 21 - 248 102 ## COG0582 Integrase 2 2 Op 1 . - CDS 189 - 719 295 ## MPTP_1391 late competence protein ComGD, access of DNA to ComEA 3 2 Op 2 6/0.000 - CDS 716 - 991 458 ## COG4537 Competence protein ComGC 4 2 Op 3 24/0.000 - CDS 991 - 2037 792 ## COG1459 Type II secretory pathway, component PulF 5 2 Op 4 . - CDS 1994 - 2962 726 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB - Prom 3105 - 3164 6.6 - Term 3009 - 3047 6.2 6 3 Tu 1 . - CDS 3203 - 4531 1410 ## COG0531 Amino acid transporters - Prom 4637 - 4696 7.5 - Term 4764 - 4817 8.0 7 4 Tu 1 . - CDS 4822 - 5895 1061 ## COG0820 Predicted Fe-S-cluster redox enzyme - Prom 5926 - 5985 7.4 - Term 5962 - 6019 11.4 8 5 Op 1 36/0.000 - CDS 6020 - 7849 1544 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 9 5 Op 2 1/0.077 - CDS 7839 - 8588 1015 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component - Prom 8612 - 8671 8.2 - Term 8643 - 8696 12.1 10 6 Op 1 3/0.000 - CDS 8706 - 9407 804 ## COG2188 Transcriptional regulators - Prom 9454 - 9513 13.3 - Term 9484 - 9530 9.5 11 6 Op 2 . - CDS 9538 - 11961 2630 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Term 12070 - 12121 4.2 12 7 Op 1 . - CDS 12301 - 13512 1650 ## COG1252 NADH dehydrogenase, FAD-containing subunit 13 7 Op 2 . - CDS 13541 - 14446 794 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase - Prom 14552 - 14611 3.0 14 8 Tu 1 . + CDS 14568 - 15548 1029 ## COG0142 Geranylgeranyl pyrophosphate synthase + Term 15583 - 15640 9.6 - Term 15577 - 15622 6.5 15 9 Op 1 14/0.000 - CDS 15628 - 17391 234 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 16 9 Op 2 5/0.000 - CDS 17391 - 19124 173 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 17 9 Op 3 31/0.000 - CDS 19129 - 20142 1073 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 18 9 Op 4 . - CDS 20139 - 21557 1467 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 19 9 Op 5 . - CDS 21559 - 21621 73 ## - Prom 21649 - 21708 5.1 - Term 21642 - 21676 0.4 20 10 Tu 1 . - CDS 21717 - 21815 103 ## - Prom 21911 - 21970 4.5 - Term 22249 - 22282 4.7 21 11 Op 1 . - CDS 22289 - 23152 875 ## COG3708 Uncharacterized protein conserved in bacteria - Prom 23172 - 23231 3.3 22 11 Op 2 . - CDS 23237 - 25318 1890 ## COG0550 Topoisomerase IA - Prom 25346 - 25405 4.8 - Term 25391 - 25441 5.6 23 12 Op 1 . - CDS 25449 - 25814 286 ## COG4699 Uncharacterized protein conserved in bacteria - Prom 25838 - 25897 4.7 24 12 Op 2 . - CDS 25912 - 26481 731 ## COG1309 Transcriptional regulator - Prom 26551 - 26610 5.9 + Prom 26520 - 26579 8.3 25 13 Op 1 3/0.000 + CDS 26614 - 27129 559 ## COG1881 Phospholipid-binding protein 26 13 Op 2 . + CDS 27146 - 28384 1038 ## COG0477 Permeases of the major facilitator superfamily - Term 28460 - 28518 13.1 27 14 Tu 1 . - CDS 28564 - 29688 1360 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain - Prom 29754 - 29813 5.9 - Term 29851 - 29907 12.9 28 15 Op 1 . - CDS 29914 - 30258 403 ## EF2071 hypothetical protein 29 15 Op 2 2/0.000 - CDS 30326 - 31471 1133 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes - Prom 31497 - 31556 3.9 - Term 31560 - 31611 9.4 30 15 Op 3 . - CDS 31628 - 32602 1226 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 32776 - 32835 6.5 + Prom 32729 - 32788 7.6 31 16 Op 1 42/0.000 + CDS 32816 - 33565 189 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 32 16 Op 2 12/0.000 + CDS 33562 - 34431 922 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 33 16 Op 3 . + CDS 34418 - 35344 1269 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin + Term 35353 - 35410 17.0 - Term 35340 - 35397 17.0 34 17 Op 1 . - CDS 35399 - 36937 1629 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Term 37040 - 37084 -0.7 35 17 Op 2 . - CDS 37085 - 37192 128 ## - Prom 37212 - 37271 3.3 - Term 37255 - 37297 4.0 36 18 Op 1 . - CDS 37307 - 38500 1702 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 37 18 Op 2 22/0.000 - CDS 38515 - 39348 1105 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 38 18 Op 3 32/0.000 - CDS 39368 - 40048 823 ## COG2011 ABC-type metal ion transport system, permease component 39 18 Op 4 . - CDS 40067 - 41137 1041 ## COG1135 ABC-type metal ion transport system, ATPase component - Prom 41167 - 41226 3.2 + Prom 41106 - 41165 6.6 40 19 Tu 1 . + CDS 41242 - 41379 143 ## 41 20 Tu 1 . - CDS 41541 - 41729 100 ## gi|257079457|ref|ZP_05573818.1| predicted protein + Prom 42053 - 42112 3.2 42 21 Tu 1 . + CDS 42251 - 42457 60 ## EF2083 hypothetical protein + Term 42487 - 42553 30.0 + TRNA 42469 - 42541 79.5 # Thr GGT 0 0 + Prom 42470 - 42529 78.1 43 22 Op 1 . + CDS 42699 - 44189 848 ## EF2146 hypothetical protein + Prom 44312 - 44371 6.2 44 22 Op 2 . + CDS 44402 - 44581 144 ## EF2147 hypothetical protein + Term 44636 - 44676 8.1 - Term 44624 - 44664 8.1 45 23 Tu 1 . - CDS 44669 - 45634 1047 ## EF2148 hypothetical protein - Prom 45762 - 45821 80.3 - Term 45652 - 45718 31.6 46 24 Op 1 . - CDS 45891 - 46181 451 ## EF2149 hypothetical protein 47 24 Op 2 . - CDS 46229 - 47509 1387 ## COG2348 Uncharacterized protein involved in methicillin resistance - Prom 47582 - 47641 7.7 - Term 47676 - 47729 15.1 48 25 Tu 1 . - CDS 47778 - 49586 2161 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains - Prom 49646 - 49705 5.4 - Term 49925 - 49976 6.1 49 26 Op 1 34/0.000 - CDS 50029 - 50862 851 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 50 26 Op 2 3/0.000 - CDS 50859 - 52565 278 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Prom 52598 - 52657 1.9 51 26 Op 3 . - CDS 52666 - 53217 405 ## COG4720 Predicted membrane protein - Prom 53261 - 53320 7.8 - Term 53381 - 53436 17.6 52 27 Op 1 6/0.000 - CDS 53447 - 54802 1924 ## COG1109 Phosphomannomutase 53 27 Op 2 7/0.000 - CDS 54795 - 55958 1370 ## COG4856 Uncharacterized protein conserved in bacteria 54 27 Op 3 1/0.077 - CDS 55955 - 56839 928 ## COG1624 Uncharacterized conserved protein - Prom 56868 - 56927 6.4 - Term 56980 - 57019 7.1 55 28 Tu 1 . - CDS 57036 - 60725 3790 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 60786 - 60845 8.6 - Term 60942 - 60993 14.5 56 29 Op 1 5/0.000 - CDS 61025 - 62365 1440 ## COG0174 Glutamine synthetase 57 29 Op 2 . - CDS 62408 - 62791 394 ## COG0789 Predicted transcriptional regulators - Prom 62813 - 62872 7.6 - Term 62932 - 62980 8.7 58 30 Op 1 2/0.000 - CDS 62994 - 64235 582 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 59 30 Op 2 . - CDS 64239 - 65168 840 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 60 30 Op 3 . - CDS 65169 - 65915 676 ## COG0584 Glycerophosphoryl diester phosphodiesterase - Prom 65961 - 66020 4.4 - Term 65969 - 66006 3.3 61 31 Op 1 . - CDS 66024 - 67835 1210 ## EF2164 hypothetical protein 62 31 Op 2 . - CDS 67832 - 68797 947 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 68821 - 68880 7.7 63 32 Op 1 . - CDS 68898 - 70319 812 ## EF2166 hypothetical protein 64 32 Op 2 1/0.077 - CDS 70330 - 71301 651 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 65 32 Op 3 . - CDS 71341 - 72165 578 ## COG3475 LPS biosynthesis protein 66 32 Op 4 . - CDS 72220 - 73647 711 ## EF2169 hypothetical protein 67 32 Op 5 12/0.000 - CDS 73691 - 74665 750 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 68 32 Op 6 . - CDS 74667 - 75725 979 ## COG0451 Nucleoside-diphosphate-sugar epimerases 69 32 Op 7 . - CDS 75738 - 76442 210 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 - Prom 76625 - 76684 9.9 - Term 76779 - 76836 10.7 70 33 Tu 1 . - CDS 76909 - 79590 1922 ## EF2174 hypothetical protein - Prom 79706 - 79765 5.0 - Term 79780 - 79827 6.2 71 34 Op 1 1/0.077 - CDS 79834 - 80682 639 ## COG3475 LPS biosynthesis protein 72 34 Op 2 11/0.000 - CDS 80698 - 81135 343 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 73 34 Op 3 . - CDS 81015 - 81455 388 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 81492 - 81551 4.1 - Term 81539 - 81587 12.7 74 35 Op 1 . - CDS 81590 - 82987 1165 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis - Prom 83009 - 83068 2.7 75 35 Op 2 . - CDS 83093 - 84394 1102 ## EF2178 hypothetical protein 76 35 Op 3 . - CDS 84423 - 86393 1886 ## EF2179 hypothetical protein 77 35 Op 4 . - CDS 86427 - 88262 1858 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 78 35 Op 5 . - CDS 88255 - 88569 377 ## EF2180 glycosyl transferase, group 2 family protein 79 35 Op 6 4/0.000 - CDS 88581 - 91724 3153 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 80 35 Op 7 26/0.000 - CDS 91714 - 92931 1196 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 81 35 Op 8 . - CDS 92944 - 93738 662 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component - Prom 93809 - 93868 7.0 82 36 Tu 1 . + CDS 93986 - 94327 313 ## EF2184 hypothetical protein + Term 94330 - 94381 12.1 - Term 94318 - 94367 13.3 83 37 Op 1 . - CDS 94374 - 95411 662 ## EF2188 racemase domain-containing protein 84 37 Op 2 . - CDS 95404 - 95769 450 ## EF2189 hypothetical protein 85 37 Op 3 . - CDS 95769 - 96494 745 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 86 37 Op 4 11/0.000 - CDS 96553 - 97395 1044 ## COG1091 dTDP-4-dehydrorhamnose reductase - Term 97411 - 97450 1.0 87 37 Op 5 11/0.000 - CDS 97488 - 98516 1126 ## COG1088 dTDP-D-glucose 4,6-dehydratase 88 37 Op 6 13/0.000 - CDS 98541 - 99113 807 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 89 37 Op 7 1/0.077 - CDS 99126 - 99992 1045 ## COG1209 dTDP-glucose pyrophosphorylase - Prom 100044 - 100103 5.6 90 38 Op 1 . - CDS 100114 - 100827 731 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 91 38 Op 2 . - CDS 100831 - 101658 733 ## EF2196 glycosyl transferase, group 2 family protein 92 38 Op 3 1/0.077 - CDS 101658 - 102440 668 ## COG1216 Predicted glycosyltransferases - Prom 102474 - 102533 7.3 - Term 102470 - 102502 -0.9 93 39 Op 1 . - CDS 102567 - 103703 917 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 94 39 Op 2 . - CDS 103684 - 103854 71 ## 95 39 Op 3 2/0.000 - CDS 103814 - 104722 875 ## COG1295 Predicted membrane protein 96 39 Op 4 . - CDS 104738 - 105502 886 ## COG0024 Methionine aminopeptidase - Prom 105529 - 105588 5.5 + Prom 105590 - 105649 6.0 97 40 Tu 1 . + CDS 105677 - 106120 656 ## COG0716 Flavodoxins + Term 106146 - 106196 9.2 - Term 106134 - 106184 13.0 98 41 Op 1 . - CDS 106196 - 106669 457 ## COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) - Prom 106713 - 106772 2.4 - Term 106725 - 106783 4.7 99 41 Op 2 . - CDS 106827 - 107399 725 ## COG1309 Transcriptional regulator - Prom 107451 - 107510 4.8 + Prom 107556 - 107615 5.1 100 42 Tu 1 . + CDS 107650 - 108888 1633 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) + Term 108973 - 109025 17.4 + Prom 109055 - 109114 5.5 101 43 Tu 1 . + CDS 109148 - 109528 514 ## EF2205 hypothetical protein + Term 109542 - 109580 5.4 - Term 109530 - 109568 6.2 102 44 Tu 1 . - CDS 109746 - 110267 527 ## COG0590 Cytosine/adenosine deaminases - Prom 110350 - 110409 3.5 + Prom 110197 - 110256 4.0 103 45 Op 1 . + CDS 110345 - 111196 789 ## COG2508 Regulator of polyketide synthase expression 104 45 Op 2 . + CDS 111253 - 112098 658 ## COG0384 Predicted epimerase, PhzC/PhzF homolog + Term 112105 - 112132 0.1 - Term 112093 - 112120 0.1 105 46 Op 1 . - CDS 112125 - 112463 550 ## EF2209 hypothetical protein - Prom 112486 - 112545 2.6 106 46 Op 2 . - CDS 112547 - 113251 782 ## COG2738 Predicted Zn-dependent protease + Prom 113186 - 113245 5.4 107 47 Tu 1 . + CDS 113450 - 113746 341 ## COG5294 Uncharacterized protein conserved in bacteria + Term 113868 - 113934 30.0 108 48 Tu 1 . - CDS 113911 - 114867 1166 ## EF2212 hypothetical protein - Prom 114890 - 114949 5.8 - Term 114932 - 114977 13.2 109 49 Tu 1 . - CDS 114995 - 116461 1786 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 116501 - 116560 9.6 + Prom 116516 - 116575 9.3 110 50 Op 1 1/0.077 + CDS 116673 - 117053 575 ## COG0346 Lactoylglutathione lyase and related lyases 111 50 Op 2 . + CDS 117075 - 117557 652 ## COG3832 Uncharacterized conserved protein + Term 117562 - 117608 5.0 - Term 117547 - 117597 12.0 112 51 Tu 1 . - CDS 117601 - 118713 611 ## EF2216 hypothetical protein - Prom 118763 - 118822 8.8 + Prom 118790 - 118849 10.8 113 52 Tu 1 . + CDS 118886 - 121027 2125 ## COG3537 Putative alpha-1,2-mannosidase + Term 121028 - 121082 15.1 - Term 121022 - 121064 7.3 114 53 Op 1 7/0.000 - CDS 121068 - 122549 1618 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 115 53 Op 2 5/0.000 - CDS 122561 - 124273 1532 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 116 53 Op 3 2/0.000 - CDS 124245 - 124880 516 ## COG5578 Predicted integral membrane protein - Term 124897 - 124929 -0.1 117 53 Op 4 14/0.000 - CDS 124951 - 126417 1251 ## PROTEIN SUPPORTED gi|15900035|ref|NP_344639.1| ABC transporter, substrate-binding protein 118 53 Op 5 7/0.000 - CDS 126441 - 127364 834 ## COG0395 ABC-type sugar transport system, permease component 119 53 Op 6 . - CDS 127376 - 128314 929 ## COG4209 ABC-type polysaccharide transport system, permease component - Term 128774 - 128826 15.3 120 54 Tu 1 . - CDS 128871 - 129182 212 ## EF2224 cell wall surface anchor family protein Predicted protein(s) >gi|237663584|gb|GG668934.1| GENE 1 21 - 248 102 75 aa, chain + ## HITS:1 COG:BH3551 KEGG:ns NR:ns ## COG: BH3551 COG0582 # Protein_GI_number: 15616113 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus halodurans # 2 75 301 374 378 77 51.0 6e-15 MFRLLCEKAEVQNITVHGLRHTHATFLIEAGANIKYVSTRLGHKNINITLDVYSDVLKEE EKETADMMDKLIENL >gi|237663584|gb|GG668934.1| GENE 2 189 - 719 295 176 aa, chain - ## HITS:1 COG:no KEGG:MPTP_1391 NR:ns ## KEGG: MPTP_1391 # Name: not_defined # Def: late competence protein ComGD, access of DNA to ComEA # Organism: M.plutonius # Pathway: not_defined # 6 134 10 134 134 75 39.0 6e-13 MNKSAGFTLMETLVSLTIVCFMTMLPTLAIHRWQETLKIEQFLATVEKQLRFAQQQAIVL EETQEVWFFEEQQSFSFPDKLNQSARRTLLAVPEKMTVSGPSKLSFLHSSGNNGRLVKYI FTWTEKKQQLILQFQMGSGKVLIYQWFLMFLPQVYHKSQVLNKFIHHISCFFFFFF >gi|237663584|gb|GG668934.1| GENE 3 716 - 991 458 91 aa, chain - ## HITS:1 COG:SP2051 KEGG:ns NR:ns ## COG: SP2051 COG4537 # Protein_GI_number: 15901871 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Competence protein ComGC # Organism: Streptococcus pneumoniae TIGR4 # 3 86 9 92 108 84 63.0 7e-17 MKKKQKYAGFTLLEMLIVLLIISVLILLFVPNLAKHKETVDKKGNEAIVKIVESQIELYT LEKNKTPSLNELVNEGYITKEQLDKYTAEKQ >gi|237663584|gb|GG668934.1| GENE 4 991 - 2037 792 348 aa, chain - ## HITS:1 COG:L0314 KEGG:ns NR:ns ## COG: L0314 COG1459 # Protein_GI_number: 15674104 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Lactococcus lactis # 9 344 24 353 357 190 35.0 4e-48 MGLLQKKRIFKPSNKLTKKQQQLFLKLLADLLANGFNIQESFSFMKKSNALPQHSITFLV EGFSSGIALQALVEELGFSTMVSAQLSFATAHGDLVGTLQAISEHFFQTEKYRQQFYKII SYPLLLIVFLILVIVGIRQFLLPQLMENDANSYSKNIGILLIVYSPYILVTLVFVLSFSF FILNRYLKHQSAIQRAFVYLKLPIIRGLYREYVSAFFALEWGKLLAQGLEMKEVIDLMRH TTNYPLMKELAGAISEGLLVGETLHRQLAAYPFFTKALGLMIQQGEVKGKLGKELMVYSN VCFQGFFKKIERVITLVQPLIFIIIACLIIGVYGAMLLPIYGNMEGVL >gi|237663584|gb|GG668934.1| GENE 5 1994 - 2962 726 322 aa, chain - ## HITS:1 COG:SP2053 KEGG:ns NR:ns ## COG: SP2053 COG2804 # Protein_GI_number: 15901873 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Streptococcus pneumoniae TIGR4 # 5 271 2 266 313 249 50.0 4e-66 MTENVKKLAHQLIEWGVLHGAQDVYFLPNDTEIAISFRTGMQRTLYTQVSAEIGEKLIFH FKFIGGMDVGERRKAQLGATTYLIGETKQRLRLSSVGDFQNRESLVIRFLHRFGEQAEHF FFPHQLNEIEASCQKRGLYLFSGPVGSGKTTTMYRVAKQRSGEQQVIAIEDPVEIEEKQF LQLQTNEKIQLTYEALIKVCLRHHPDILIIGEIRDGETAQAVIRAALTGHTIFATIHARN LLGVQRRLIELGGPEHELAECLQGIIYQQILTTTINKEQVAGILYDYFFFKEAVIKSSWQ KNLRKAWAYGFITEKTYFQAIE >gi|237663584|gb|GG668934.1| GENE 6 3203 - 4531 1410 442 aa, chain - ## HITS:1 COG:SA1270 KEGG:ns NR:ns ## COG: SA1270 COG0531 # Protein_GI_number: 15927018 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Staphylococcus aureus N315 # 4 437 5 437 440 423 60.0 1e-118 MEKKQLKREITTFGALSTVMGTVIGAGVFFKAASVVGHAQSASLAIFAWVLGGALTICAG LTSAELATAIPETGGAVKYIEYTYGKLAGFLLGWAQSIIYYPANISALSIIFSTQLINLF HLSANLLIPIAILAGTSITIINLLGTKIASLVQSTTLVVKLIPIALISLVGLFTPGQVAV SLFPVETTANTGFLVAFSGALVATMFAYDGWLGVGNVAGEMKRPERDLPKAIIFGLLLIT LIYALINFVFLKTLPIEQIAGNLNAASDASVAIFGPIGGKIVTIGILISVYGALNGYTMT GIRIPYALALDNLMPFSRQFQKLSKRFVVPYVAGIFQLAVAIIMMFFGTFDLLTDMLVFV MWLFNLLIFLAVFILRKREPELKRPYKVPGYPIIPIIASLGGIFILVTTSITQPILALIG IGITLLGIPVYLVNKQKTKPKT >gi|237663584|gb|GG668934.1| GENE 7 4822 - 5895 1061 357 aa, chain - ## HITS:1 COG:L184159 KEGG:ns NR:ns ## COG: L184159 COG0820 # Protein_GI_number: 15672161 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Lactococcus lactis # 3 355 10 363 365 556 75.0 1e-158 MQKESIYGLTREQLVDWFLAHGEKKFRATQVWEWLYTKRVASFSEMSNISKSLMTLLEEN FSLNPLKQVIVQEAQDGTVKYLFELPDKNMIETVLMRQEYGLSVCVTTQVGCNIGCTFCA SGLLKKQRDLTAGEIVAQIMWVQHYFDERGLDERVSHVVVMGIGEPFDNYANVMNFLRTI NDDKGLAIGARHITVSTSGLVPKIREFADSGLQVNLAISLHAPNNEVRTSIMRINRSFPI EKLMAAIDEYIEKTNRRVTFEYIMLSQVNDRPEHAQQLADLLRNKKKLSYVNLIPYNPVS EHDQYSRSSKEAVLKFYDVLKKNGINCVIRKEHGTDIDAACGQLRSKQMKKEKVKNQ >gi|237663584|gb|GG668934.1| GENE 8 6020 - 7849 1544 609 aa, chain - ## HITS:1 COG:BS_yxdM KEGG:ns NR:ns ## COG: BS_yxdM COG0577 # Protein_GI_number: 16081014 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Bacillus subtilis # 1 603 1 620 622 256 32.0 1e-67 MNFNQFVIRNTIRNKHLYLAYFLSTMFSVMIFFTFTGFVFHPALANGLNPKAQMGMTAAA IIIYGFSFLFVLYSMDVFIQSRKKEFGTLMIQGMSPKQLKKMIFIENLVIGFFATIFGSI LGVGFSQFILWISNLLMHLGLGFYLPVMPFIITVISFAVLFLVISFFIQFRLPKATLQEL LKAGEMGKGEIKSSKVKSFLAVLLLIVGYGIALVAKGQLVLMVMFPVIFLVILGTKFLFD QLSVSVIERLKRKPKIFWKKTNMVVLSDLAFRMKDNARSFFLVSVISTVAFAAIGTLYGV NEMIFKGISSVPYELTLSDSTNPENQEMKQFATKTFQEKNIQFDQIDYTMYKTSAGIQLI KTSEYNKLAKFIDEPTLTGEKVVNLSQKDAPSAASVDVKSVQLANDQVLNIDKTEETNVL PTFGGVVVIPDSTSTDGIKAETETIWQPKAGTNREELIKAENIIGDKYPMLVGTAAMSAA ITQYYTPVLFVGLFIGIVFFVSAGSFLYFRLYSDMNTDVEKFKMIYKLGLTKKELKKMIY QQVGILFFTPIVVSFIHGAVALKAMYAVLDQPMQLAGWEVLGVFLLIQVVYYLIARTFYF KKVYHLVKD >gi|237663584|gb|GG668934.1| GENE 9 7839 - 8588 1015 249 aa, chain - ## HITS:1 COG:BS_yxdL KEGG:ns NR:ns ## COG: BS_yxdL COG1136 # Protein_GI_number: 16081015 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Bacillus subtilis # 1 249 4 252 257 277 54.0 1e-74 MLEVQNLKKVYGNEIKYEALKGINLIVQDGEFIGIMGPSGSGKSTLLNLLATIDSPTDGE ILLNGKNPNNLNQEQIAKFRRTELGFVFQSFNLMPTLTVEENIILPLTLDGEKVSVMKRQ LAELSERLGINHLLKKRIAEISGGQAQRVAVARAMIHHPQLLLADEPTGNLDTKSSKDVM GLLQQLNEEEAATILMVTHDPLAASYCKRIVFIKDGELIDEIVQNGNQKEFYDLIMVKLA EIEGVDNEF >gi|237663584|gb|GG668934.1| GENE 10 8706 - 9407 804 233 aa, chain - ## HITS:1 COG:ECs4225 KEGG:ns NR:ns ## COG: ECs4225 COG2188 # Protein_GI_number: 15833479 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 6 187 33 206 265 76 28.0 4e-14 MRRKSVLYLEVADQIKEDILSGKYPVGTFLPTETELEELFNVSKITIRRAIEMLATEEFV EKKSGRGTTVLSNRPYNKLSKAGTFTEFLNESGQKVTKKVLQVENLTLSKEMPAYQFLGE EVVHLSRLYLIDEQPYIYFNYYLPAAMKDVSLTEYKEESLYRLMDRHAIEIYKFEDRFEV ATLTEAEQKMLQTTETTGLKRIRRSLSPTGRCVEYSEAIYNTKIHPYVIEYEA >gi|237663584|gb|GG668934.1| GENE 11 9538 - 11961 2630 807 aa, chain - ## HITS:1 COG:SPy0458 KEGG:ns NR:ns ## COG: SPy0458 COG1674 # Protein_GI_number: 15674577 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Streptococcus pyogenes M1 GAS # 4 792 3 798 801 681 50.0 0 MAQKRATNKKKSTTKKKTKKQQQQQERLNYMFLGLIFILFGVFGLFRLGFLGTLLANCLR LVVGNTFPFAAILLILYGLLVMIYGKDFPLKRGRPIFGAVLIYISVLLFFHAFMFRNVSG SQPDILGNTWEFLQSDLKANQVTQNVGGGMIGALLYQGTYFLVAQFGSYLIATLLLLAGI FLMSMWDFQQIVDHFQSIQDRLSHVSAKSQARQEEKEAKRAAKKEAKAAERQAKIEAAAQ QKLQERERMEQAAAERLTKTPVETHQPMVEEPAAPTPVQIDSFQQQNQAMPVPPIAATKP QREQEEEAADEAGVLEFEISEEAEDRDYQLPPTDLLDTIQATDQSGEYEKIEKNIGVLEQ TFKSFGVDAKVVKASLGPSVTKFEVQPAVGVKVSKIVNLTDDIALALAAKDVRMEAPIPG KSLIGIEVPNSAISTVSFRDIVEAQPSHPDKLLEVPLGRDISGMVQTADLSKMPHLLIAG STGSGKSVAINGIITGILMQAKPHEVKLMMIDPKMVELNVYNGIPHLLTPVVTNPRKAAQ ALQKVVQEMEFRYEKFAATGVRNITGYNQLIQQKNAEDGENRPILPFIVVIVDELADLMM VASNEVEDAIIRLAQMARAAGIHMILATQRPSVDVITGIIKANVPSRMAFAVSSGTDSRT IIDTNGAEKLLGRGDMLFLPMGENKPIRIQGAFISDQEVERVVAFVTDQQEAEYQESMMP TDEPTTSGGGEAPQDELFEEAKNLVVEMQTASISLLQRRFRIGYNRAARLVDELEAHGVI GPSEGSKPRKVFLQAESEEAATETPEQ >gi|237663584|gb|GG668934.1| GENE 12 12301 - 13512 1650 403 aa, chain - ## HITS:1 COG:lin2488 KEGG:ns NR:ns ## COG: lin2488 COG1252 # Protein_GI_number: 16801550 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Listeria innocua # 1 402 1 402 403 345 44.0 6e-95 MNKKHVVILGAGYAGLKTLRELQKGAKDVEITLVDRNNYHYEATDLHEVAAGTQPAEKIT YNIMDVVDEKMTTFIQGTVKTIDAATQTVALEDGQTINYDYLVVSLGFESESFGIPGVQE HALQMVDVKTALNVYEHIQEQMRQYKATQNEEFLKIVVCGAGFTGIELLGSLVENKPKFA EIAGVSADQIQIYCVEAVTRLLPMFNEKLANYGVQLLKDSAIHLLLGKPIKEIKPGAVVY QDNEAGDLAELSAKTIIWTTGVSGSHVVGDSGFEARRGRVMVQPDLTDANHSNVYIIGDC SAVMDTETNRPYPTTAQIALKMGAHAAKNIQAQLKGEATKPFSFKSQGSVCSVGNTRALG IVGKTDIKGYPASFMKKIIMNKALFETGGTKEMMAKGRFDLYH >gi|237663584|gb|GG668934.1| GENE 13 13541 - 14446 794 301 aa, chain - ## HITS:1 COG:L187450 KEGG:ns NR:ns ## COG: L187450 COG1575 # Protein_GI_number: 15672164 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Lactococcus lactis # 1 298 1 298 301 286 53.0 2e-77 MNREIFFELVELKAKTASVLPFLLGICFSWYQYGRLHVGYVLIFFIAMFIFNMAVDILDN YNDYHHATEVHDYKEKTNIIGRENLSLPLIRKMIFWMILVSALMGIGLSFIVGWPLLIMG LYCYLIGIFYSSGPKPLSSLPLGEVFSGFTMGFMITLICVYINTFEVFNWSAANLWGIFL VALPNTCYIANLMLANNICDLEEDENNKRYTLVHYLGKASSLKLFVGLNTIAMLAILLAV GLGLTPPTMLLMLLTLPFVRKQTQALLKEQVKSKTFVCAVKILAVGATAQVLFFAIGLWW L >gi|237663584|gb|GG668934.1| GENE 14 14568 - 15548 1029 326 aa, chain + ## HITS:1 COG:L186258 KEGG:ns NR:ns ## COG: L186258 COG0142 # Protein_GI_number: 15672163 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Lactococcus lactis # 1 326 1 326 326 305 46.0 5e-83 MNTFWKSFPDVERSLTETCELIEQTLHTRNEDIEEALVTLARSGGKLLRPAFFFLFAQLG DEEKQEKQQLLKIAASLEILHMATLIHDDIIDDSPLRRGAVTIQSQYGKDVAVYTGDLLF TEFFTLIADAMNGSEFMKINAQGMKRLLLGELDQMSHRFDRRMSIPAYLRSVNGKTAELF SLSCLEGAYFGHSSKEVQRLAKRIGRHIGIAFQVYDDILDYTADTETLKKPALEDLSQGV YTLPLLFAYQAAPDVFSPYLDKGRAITLEEAAEVAALVNDYHGVTEAQAFAKKVTNKAIT DIQQLPDGTAKETLLSLTELLLHRSF >gi|237663584|gb|GG668934.1| GENE 15 15628 - 17391 234 587 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 312 568 91 354 398 94 27 2e-18 MEKQPTTKDVWKNDQWVRPFLKRYKKTLYFALLLGFLTFFSAGALMFTSGYLISRAASLP ENILLIYIPIVLTRAFGIGRPVFRYVERLTSHNWVLKMTSDLRLKLYNVLEKDAIFFKTK YRTGDILGLLSEDINHIQNLYLRTIFPTVIAWILYIFLVIALGFFSWWFALCMLLMLGVV VFLLPLVSVLVNGARQEKHKYAKNELYQTLTDNILGVSDWVFSQRGSEFVARYETDEANV RALDEKMKQFNRGRDFVLQLLFGVIAIAVLAWTSVRFPGNHGGAANWIGAFVLTVFPLID AFAPLPAAAQETTIYKDSIRRFNELPEGEDDSTEAPVQPNGTGLSIEHLSFAYENQAKKV LNDLSLTIPEKQKLAILGRSGSGKSTLASLIRGDLRPTSGEILLGNIPTEAFGETMTEYI GVMHQAPYLFRTTILNNIRIGREEASEAEVWAVLEKVGLKEMVAQLPEGLQTMVDEAGLR FSGGERHRLALARILLQDTPIVLLDEPTTGLDPITEQQLLETFFEALKDKTVIWITHHLQ GVTLMDQVIFIEDGQLEMSGTPEELLATNAHYQKLYRIDRGISSFEE >gi|237663584|gb|GG668934.1| GENE 16 17391 - 19124 173 577 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 348 560 15 228 245 71 27 2e-11 MIDKDILQMPKIKKILVLLAGFSFLQAVFIIGQAFFLSKAIVGLWSGGHLNQQLQSILLF FIFYLGRHVITYFRERMLDTFSYERSKELREQLLTKIFRLGPNVVQKNGTGNMVTMALEG ISQTENYLQLILTKMMNMMIIPWIILAFVFTQDIRSGITLLIVFPIIIIFMIVLGYAAQS KADKQYAAFQMLSNHFIDSLRGIDTLKLFGLSKKYAGSIYHTSERFRKATMSTLKIAILS TFALDFFTTLSVAVVAVFLGLSLLNGTILLFPALVTLILAPEFFLPIRDFSSDYHATLDG KNSFQAIQAVLALPEAEQTDVLTLDDWHQESQLSVTALNFSYEDATQEAIQSLQFSVDGR KKIGIIGASGSGKSTLINLLSGFLLPTEETSQLAINGQTIPHFLQKDWQKQILYIPQAPY IFQDTLANNIRFYTPEATDEAIQQAIQLVGLDELVKDLPEGIHTLIGESGRMLSGGQAQR VALARAFVDQKRHVLLFDEPTAHLDIETEVEMKERMLPLMNNHLVFFATHRLHWMEEMDY ILVMEKGQLVEQGTLAELIEKDGYYVQLMKQMRGGRQ >gi|237663584|gb|GG668934.1| GENE 17 19129 - 20142 1073 337 aa, chain - ## HITS:1 COG:L109201 KEGG:ns NR:ns ## COG: L109201 COG1294 # Protein_GI_number: 15672687 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Lactococcus lactis # 1 330 1 331 331 356 61.0 3e-98 MSTLQLLWFVLIGVLFSGFFFLEGFDFGVGMAVQTLAHNDDEKDQVVATIGPVWDGNEVW LLTAGGAMFASFPYWYASLFSGYYLILFTILFGLIIRGVSFEFRHNMPEGKRRRMWNWTL SIGSFLVPFFFGILFISLVQGMPLDANGNMHAQFTDYFNLFSIVGGVALTLLCYLHGMNY IALKTEGPIRERARNYAEILYGVLYIGLVVFAVLMYFKTDFYEKNFAVTLILTLAIVVLT VIANVGVFKRKEMLAFLASGLTLVVLVALLFSGLFPRVMIGSEGFDLLIKDATSTPYTLK IMTWISLSILPFVLAYTAWSYYIFRKRISQTAVPEGY >gi|237663584|gb|GG668934.1| GENE 18 20139 - 21557 1467 472 aa, chain - ## HITS:1 COG:L107726 KEGG:ns NR:ns ## COG: L107726 COG1271 # Protein_GI_number: 15672686 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Lactococcus lactis # 1 446 1 451 491 543 60.0 1e-154 MFDIVTLARIQFAMTTVFHFFFVPFSIGLALVVAIMETMYVVKKEERYRKMAKFWGNIFL LSFAVGVVTGIIQEFQFGMNWSDYSRFVGDIFGAPLAVEALLAFFLESTFLGLWIFTWDK MNPKVHVTFIWLVVFGSMMSAFWILVANSFMQHPVGYVINNGRAEMVDFVAVISNPKVWY EFSHVIMGAFTLGGMAVAGMAAFQLLKKRDISFHKASMRIGLWVTLFGSIGVLLAGDLQM KALIEGQPMKFAAMEGAYEDSDDPAAWTLIAWADEREHKQVFGIDIPYMLSILSYNKLSG SVDGMDTVNKRLVEKYGDDKNYYPPVNTLFWSFRIMAGFGALMLLVAALGLFFTRKKKPS LYEKKWMLWIVALCTFAPFLANTTGWLVTELGRYPWTVYGLFTIEQSVSPNVSVASLITS NVIYFLLFAGLGSVMVYLVILELRKGPDYEAKKLAKENEPALDPFDKGVFGE >gi|237663584|gb|GG668934.1| GENE 19 21559 - 21621 73 20 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEMNNSGKLVSLCGGKSGRK >gi|237663584|gb|GG668934.1| GENE 20 21717 - 21815 103 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIEEREEILVAPKKIVRNASVLFGFCLRKLYT >gi|237663584|gb|GG668934.1| GENE 21 22289 - 23152 875 287 aa, chain - ## HITS:1 COG:BS_ydeE_2 KEGG:ns NR:ns ## COG: BS_ydeE_2 COG3708 # Protein_GI_number: 16077584 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 124 284 1 161 163 130 38.0 3e-30 MLANLNQAMDYIEEHLTEEVSFDELAKKTGISVYHFKRTFSFITGMSLAEYIKKRPLAEA NLALLAGEKVTDVAFKYGYQSIEGFSRAFRDWSGQAPSEVMKTQIQKTFPKFSFYIDIKG GQSMDVKLIEKPAFQIVGVSQKVPLQYQGENQAIMELAQRITPQQRAEMHTFDDIYPHQV VNASFDFQEGRTTEGGEMTHMIGFATSQENTYEDLEQLSVPAHTWAVFPNEGPFPQTLQE TWAKIFSEWLPSSGYQVVAAPEISFTQYQGPAEAKYSEIWLAVTATK >gi|237663584|gb|GG668934.1| GENE 22 23237 - 25318 1890 693 aa, chain - ## HITS:1 COG:CAC2947_1 KEGG:ns NR:ns ## COG: CAC2947_1 COG0550 # Protein_GI_number: 15896200 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 2 584 1 615 618 458 42.0 1e-128 MVAKQLIIAEKPSVAKDLSRVLGANQKNKNYYEGPNVIVTWALGHLLGLKMPEDLNKEWQ TWQMETLPMIPKNLGIKPLPKTGHQLKAIKQLANRKDVSEAVIATDAGREGELVARWILE YVRFNKPVKRLWISSQTDKAIKDGFKKIRPAKDYDNLYYSALARAKADWLVGLNVTRALT VKYQDNLSAGRVQTPTLAMVRQQEKTIEQFKPQTYFTISLSVESEKAKMTQKNPYALKER QEAEQLVKELSKQKGLVTDIQEKVKTENAPLPYDLTEIQREANQRFQFSAKKTLSLVQSL YETHKIVSYPRTDSKYLTTDMKGTMKERLQAIADFSPEVKGYLKNGAVVKQQKVFQNAKV TDHHGLIPTEQRPRYEKLSNDEQKIYQMIVQRFLGLFAEPNQTKQTKVTVAFGKETFVFH QNKVVVAGWKTTAEQPLSTVQWQKGMTVAPNFTINKELTSPPKPLTEGTLLGKMEKHSLG TPATRAEIIEKLIKSELMERTNSGLSVSAKGKQLLDLVNPSLVTPELTEKWEKSLEAIAS GQQKSQLFLKDIEEDTKKLVREIKQSEKKYQDFSITQKKCPDCGSNLREKNTKDGKIYVC TNQECSYRRRKDPKVSNHRCPQCHKKMVIIEGKNGRSFKCKFCSITEKIPDKKERKQKMT KHEERRLMKKYSQPDEPEESALAQALKAAMNQE >gi|237663584|gb|GG668934.1| GENE 23 25449 - 25814 286 121 aa, chain - ## HITS:1 COG:L100735 KEGG:ns NR:ns ## COG: L100735 COG4699 # Protein_GI_number: 15673831 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 1 119 1 119 122 99 43.0 1e-21 MYQVITMYGDNEPWWFFDDWQEDIVQEKTFDNLTDAETYYVEVWQKLSQNYTYVNTKPNY LTAFWNDGEERWCEECDEDLQQYFGLALLENHHAVTFENKAEFTTISNHFGKTKFCKRKV I >gi|237663584|gb|GG668934.1| GENE 24 25912 - 26481 731 189 aa, chain - ## HITS:1 COG:CAP0028 KEGG:ns NR:ns ## COG: CAP0028 COG1309 # Protein_GI_number: 15004732 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 3 185 2 183 187 172 50.0 5e-43 MAKKRNLTKAKILESARNLAEELGVQQLTFQNLAVDLGIKYPSLYNHFKNIAEVKNALVD LLIQELNDALRRALVGKSGAEAIRIYAETYQQFAFENSAVYELLISVPKTQNQQLIEGIH ETNQIILQLLAFYPFNNEERLHKSRELRSLIHGYITLRFLGYFQREEATPEESYRRMIED FIVSLEVAG >gi|237663584|gb|GG668934.1| GENE 25 26614 - 27129 559 171 aa, chain + ## HITS:1 COG:BS_yxkA KEGG:ns NR:ns ## COG: BS_yxkA COG1881 # Protein_GI_number: 16080938 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Bacillus subtilis # 1 170 3 165 168 110 36.0 1e-24 MHITNRSHLADRYGKRTSAEFLLHERPILSFPISLAAIPKEARYLSWELIDYDTIPLIGF PFIHWLAANVPVTNEIPEDFSRTALKPTIQEKNSLASPLGKQMIPALATETLPELTERYL GLSPRSGVHTYTLYVYTTKNPLNLKEGFFANELHQALNDQLLAKAKFEFLY >gi|237663584|gb|GG668934.1| GENE 26 27146 - 28384 1038 412 aa, chain + ## HITS:1 COG:lin2884 KEGG:ns NR:ns ## COG: lin2884 COG0477 # Protein_GI_number: 16801944 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 16 411 4 399 402 422 53.0 1e-118 MYELIKSKIFRPRQPWEKNLLVLWFGTFMAGIGFSLVMPFMPLYINTLGTFTHQQLNFWS GITFSSTFLVTTIVSPWWGRLADRKGRKLMLLRASLGMAIVISLMGAVTSVYQLIGLRLL QGVFSGYISNATALVATGTPKEKSGQVLGTLATGSVTGTLLGPLLGGVTASIFGYRPTFF ITGTILLLVFVLSLVFVHEEFVPIEKNQAASGKQILKKLEHPHVILGMFITTLIIQASNN SISPIISLYIQQLLGGHGNVTLISGVIASIPGIATLIAAPRFGRLGDRIGSERILTIGLI LAIFVYLPMAFVQNVWQLAMLRFLVGISDACLLPAVQTLITRYSPSDAAGRIFSYNQSFQ ATGNVIGPMIGSSVSAAFGYRGVFISTSCLVLLNLLWVRRSTAELKKEKNDD >gi|237663584|gb|GG668934.1| GENE 27 28564 - 29688 1360 374 aa, chain - ## HITS:1 COG:SPy2188 KEGG:ns NR:ns ## COG: SPy2188 COG0482 # Protein_GI_number: 15675922 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Streptococcus pyogenes M1 GAS # 1 374 1 373 373 563 77.0 1e-160 MADNSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYKDVA KVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFKAFLDYAMQLG ADYVATGHYAQVETDENGVVHMLRGIDNNKDQTYFLSQLSQAQLAKTMFPLGGMEKSEVR AIAERAGLATAKKKDSTGVCFIGEKNFKEFLSNYLPAKKGNMVTEDGEIKGQHDGLMYYT IGQRQGLGIGGGGKTQEPWFVIGKDLTTNTLYVGQGFHHEKLYATHLEASEVHFTVDTPM PKEFDCTAKFRYRQADIPVHVSLSEDGTKATVTFKEPARAVTPGQAVVFYDGMECLGGGL IDRAYQDEKELQYV >gi|237663584|gb|GG668934.1| GENE 28 29914 - 30258 403 114 aa, chain - ## HITS:1 COG:no KEGG:EF2071 NR:ns ## KEGG: EF2071 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 114 1 114 114 208 100.0 5e-53 MAFTTTAAVEGSTVFYKVHPSAKRYTLKDNGFTETKSGNFQLIRSLDPTPQRNEGFKLKI TITADLKELKMSITTANGLKPMNIFKNEQHEMSKEKYFFLMDGLISRGVLEKVE >gi|237663584|gb|GG668934.1| GENE 29 30326 - 31471 1133 381 aa, chain - ## HITS:1 COG:lin1548 KEGG:ns NR:ns ## COG: lin1548 COG1104 # Protein_GI_number: 16800616 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Listeria innocua # 4 381 5 381 382 408 56.0 1e-113 MEPIYLDHAATTPLHPTVIQAMTENMQTTFGNPSSIHQFGRKAHGLLEEVRQTIAESLQA KPHEIIFNSGGTEGDNTAILAVAFSRQKEGKHIITTAIEHPAVLRTMEYLETLGFEVTYL PVNENGQISMDQFKKSLREETILVSMMYGNNEIGNRLPIAEVGAILKNHSAIFHTDAVQA YGSEVILPHELGIDLLSISAHKINGPKGVGFLFKSDAIQLPPLLHGGEQEEKRRAGTENL AGIIGMGTAVSLLTSAEKQARKTAYQSFQTIILKALEEANIDFSINGEPTNRLAHVLNLH LKGIPSDLLLMHLDLRGIAISTGSACTAGTVDPSHVLTAMYGENSSAIKESIRISFGYGN TPEEIATFSEVLVAVIQQLKK >gi|237663584|gb|GG668934.1| GENE 30 31628 - 32602 1226 324 aa, chain - ## HITS:1 COG:SPy1123 KEGG:ns NR:ns ## COG: SPy1123 COG0462 # Protein_GI_number: 15675103 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 324 1 323 326 416 62.0 1e-116 MTENYQDDTLRIFSLNANRPLAEKIAASVGTELGKSTVRQFSDGEIQINIEESIRGDHVY IIQATNAPVNDHLMELLILIDALKRASAKTVNVILPYYGYARQDRTAKPREPITAKLVAN MLVEAGATRLLTLDLHTVQVQGFFDIPVDNLFTMPLFAHYYRQQALVGEEIVIVSPKNSG VQRARSLSEYLDATLAIVDHEEIDGVRQEGYVIGNVAGKKCILVDDILNTGQTLATAAEV LMKNGAQEVYACASHGLLSEGAKATLENAPIKEISITDSVYTTADRQPATLNIISCAELM GEALLRIHENKPMSPLFRLEPKGE >gi|237663584|gb|GG668934.1| GENE 31 32816 - 33565 189 249 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 22 226 17 227 245 77 28 3e-13 MRKSFNLAVQALTVQYQGRTALNNIHVTIPSGKITGIIGPNGAGKSTFIKGLLGLIKTKE RDVLLNNQAIDQQKTTIAYVEQRSALDLSFPISVFETVLLGTYPNLGLLKRPGKKEKQAA MAALKMVQLEDYAQRQIGELSGGQLQRVFIARVLAQGAEVIFLDEPFVGIDMSSEKVIMD ILKSLKNQGKMIIIVHHDLHKVSHYFDELIVLKNRLIAAGPVEQTFTAETLQEAYGDLLG DLLIQGVAK >gi|237663584|gb|GG668934.1| GENE 32 33562 - 34431 922 289 aa, chain + ## HITS:1 COG:lin1962 KEGG:ns NR:ns ## COG: lin1962 COG1108 # Protein_GI_number: 16801028 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Listeria innocua # 5 282 3 280 280 284 67.0 1e-76 MIAAFIDGLFRYQFLQNALLTSIIVGLISGVIGSFIILRGMSLMGDAISHAVLPGVAVSY MFGFNYIFGASIFGLLAALSIGFITQKSPLKNDTAIGVVFSSFFALGIIFISFAKSSTDL YHILFGNVLAVADTDILITCVVGVIVLIFVALFYKELQLTSFDPTMAQAYGLNIQFFHYA LMFLLTLVAVSSLQTVGTILVIAMLITPAATAYLLTNHLPTMIGLASTFGILSSVIGLFF SYSYNLASGATIVLTAALFFLLAFFFSPKKGLVFVNREKEMEESTNEKI >gi|237663584|gb|GG668934.1| GENE 33 34418 - 35344 1269 308 aa, chain + ## HITS:1 COG:lin1961 KEGG:ns NR:ns ## COG: lin1961 COG0803 # Protein_GI_number: 16801027 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Listeria innocua # 15 305 14 308 310 347 61.0 2e-95 MKKFSLFFLTLLAGLTLAACGNQAAEKKEKLAIVTTNSILSDLVKNVGQDKIELHSIVPI GTDPHEYEPLPEDIAKASEADILFFNGLNLETGGNGWFNKLMKTAKKVENKDYFSTSKNV TPQYLTSAGQEQTEDPHAWLDIENGIKYVENIRDVLVEKDPKNKDFYTENAKNYTEKLSK LHEEAKAKFADIPDDKKLLVTSEGAFKYFSKAYDLNAAYIWEINTESQGTPEQMTTIIDT IKKSKAPVLFVETSVDKRSMERVSKEVKRPIYDTLFTDSLAKEGTEGDTYYSMMNWNLTK IHDGLMSK >gi|237663584|gb|GG668934.1| GENE 34 35399 - 36937 1629 512 aa, chain - ## HITS:1 COG:CAC3339 KEGG:ns NR:ns ## COG: CAC3339 COG0488 # Protein_GI_number: 15896582 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 1 509 1 512 518 429 44.0 1e-120 MSILTIEHLTHRFGEKVLYEEASLQVNKGDHLGLTGQNGVGKSTLIKILTGEVLPDEGTI QWQKNCKIGYLDQHVSVEQSLTMVDFLKQAFQELFDKEAKLTKLYEEYSQTASEKLLEQA GKLQTDLDESNFYQIDTIIQDLANGLGLQAIGLDKKLGELSGGQRSKVILAKLLLEAPDV LLLDEPTNYLDDTHIQWLVRYLNNFEGSFLLVSHDYQFLNEVTNCIADIEFGKLTKYTGN VEKSFAQKEQNKQTYLKQYQAQQEKIEKMEAYIRKYKAGNRATMAKSRQKQLDRLERLTP PGSLTKPAIEFPYQGLVATQALTTQKLVVGYREPLLEPLDLMVHVGEKVALKGFNGIGKS TLIKTLTKVIPSLDGEFHYPLNTKIAYFTQDLAWPNEQLTPLDYLSDRFPDTTIKERRSH LARAGLPDKLAMQSLALLSGGEQTKVKLAELMMQTSNLLFLDEPTNHIDEAAKKSLQEAI HVYPGTVFLVSHEADFYEEIVDRVIDIEELVK >gi|237663584|gb|GG668934.1| GENE 35 37085 - 37192 128 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFFVLTDKLTRKVAPDSLRTDEALLWSRAINFFIA >gi|237663584|gb|GG668934.1| GENE 36 37307 - 38500 1702 397 aa, chain - ## HITS:1 COG:lin0542 KEGG:ns NR:ns ## COG: lin0542 COG1473 # Protein_GI_number: 16799617 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Listeria innocua # 9 397 5 390 393 265 38.0 1e-70 MSTTTIQTIQEAIATEKEWIIHLRRHFHQYPEASLKEYETIKRIKEELLALAIPFVEVGE TGVLATIEGGLGAGKTILLRADIDALELPDATGAAYASKNPGLNHACGHDGHAAALLGAA KVLKKHQDTFSGTIKLAFQPAEEIGAGARQFVEGNYLEAIDQVFGIHLDSSVPVGKLVAT KGATNASCDIFKIEVSGQSSHVAQPQNGRDAVLAAASIVVELQKIVAREIDPLDSVVVGI GVLQAGTRYNIVANQATIEGTVRTFSQETRQFVLQRVEEIAHEIAQSNRTEIADFSVYAA ANPLINEEQATNRAQQVASEIVGFENVVTDHPKSLGADDFADYLAVIPGIYGRVGSRNPE NPATHFGHHHEQFDIDERALLLAAEYHVRYALNYLSE >gi|237663584|gb|GG668934.1| GENE 37 38515 - 39348 1105 277 aa, chain - ## HITS:1 COG:L118475 KEGG:ns NR:ns ## COG: L118475 COG1464 # Protein_GI_number: 15672301 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Lactococcus lactis # 29 271 35 281 286 210 50.0 2e-54 MKKFSKLIGLIGVLAFTIAGCASGSVKDTKTETVKLGVVGTKNDEWESVKDRLKKKNIDL QLVEFTDYTQPNAALAEKEIDLNAFQHQIFLDNYNKEHGTKLVSIGNTVNAPLGIYANKL KDITKIKDGGEIAIPNDPTNGGRALILLQTAGLIKVDPAKQQLPTVSDITENKRQLKITE LDATQTARALQDVDASVINSGMAVDAGYTPDKDAIFLEPVNEKAKPYVNIVVAREEDQEN KLYQKVVEEYQQEETKKVIAETSKGANVPAWETFGKK >gi|237663584|gb|GG668934.1| GENE 38 39368 - 40048 823 226 aa, chain - ## HITS:1 COG:L122401 KEGG:ns NR:ns ## COG: L122401 COG2011 # Protein_GI_number: 15672305 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Lactococcus lactis # 1 226 1 230 231 182 53.0 5e-46 MYQLFEKYFPNVVQLKQEFLQSTWETLYMVFWTALIAGVLGVLLGVVLVSTGPSGVLKNP PLYSVLEKNINVCRSIPFIIMLALIQPLTRILAGTTIGTTAALVPLVIGVIPFFARQIEN ALLEVDPGVIEAAEAMGTSPLGIIFRVYLIEGLPSIIRVSAVTIINLIGLTAMAGAIGAG GLGNLAITRGYNRFQTDVTFMATLIILIMVFISQAISNQLIKKTSH >gi|237663584|gb|GG668934.1| GENE 39 40067 - 41137 1041 356 aa, chain - ## HITS:1 COG:SPy0320 KEGG:ns NR:ns ## COG: SPy0320 COG1135 # Protein_GI_number: 15674484 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 1 342 5 351 354 362 55.0 1e-100 MIELKNISVTFQQKKQEIQAVQDVSLTIDKGDIYGIVGYSGAGKSTLVRVINLLQRPTAG TVIINKENILTFSKKELRQQRKKIGMIFQHFNLMKERTIFSNIDFSLKYSGLSKSERRQK ISHLLELVGLSEKRDAYPSQLSGGQKQRVAIARALANDPEILLCDEATSALDPKTTGQIL ALLKKLNQELNLTIVLITHEMQVVKEICNKVAVMENGCVVESNDIVSIFSQPQQPLTKDF IRTATHIDQALTTILEHPKLADLDKNQELIEFSYVGDQTNEPLIAQLYSQYQVYTNILYG NVEIVQNVPIGHLIVVLSGDEAQRQQALTYLAKQGVRTNVLKTYQQTKQKQNLQVI >gi|237663584|gb|GG668934.1| GENE 40 41242 - 41379 143 45 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLPPHVQNLLTQIPFSSTEQYVRYPSSITGAPVAALCLTLGALAQ >gi|237663584|gb|GG668934.1| GENE 41 41541 - 41729 100 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|257079457|ref|ZP_05573818.1| ## NR: gi|257079457|ref|ZP_05573818.1| predicted protein [Enterococcus faecalis JH1] predicted protein [Enterococcus faecalis JH1] # 1 62 1 62 90 100 93.0 5e-20 MMSAITRRRMAFVSDEQYKVTEGQVVSFARKCSYDSRHSQILLSTTTDAKRESSYYLRLL DA >gi|237663584|gb|GG668934.1| GENE 42 42251 - 42457 60 68 aa, chain + ## HITS:1 COG:no KEGG:EF2083 NR:ns ## KEGG: EF2083 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 68 1 68 68 107 100.0 2e-22 MSTVFLRKKSFFFFYERAIDKLSSIRYSISCARDLYDFSKGTLTITRRSVAFENELYGFH FVAILELV >gi|237663584|gb|GG668934.1| GENE 43 42699 - 44189 848 496 aa, chain + ## HITS:1 COG:no KEGG:EF2146 NR:ns ## KEGG: EF2146 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 496 1 496 496 861 100.0 0 MMKQLPTESKKFDLKNWCIENKAYLLLIILIYQVAVLSIGIINFPYLDDNARQVAGMTDF GTTYARWGSEFLSWFVQGSRHLTDLGLTTPILTGLILSLTSILAIYIINDQKISWGSSLV ATLIGLNPWFLQCLSFRFDSPYMALSIFCSFLPFYWWQRNSFTFFLVSVFSLFVMFNTYQ ASSGIYIVIVLFLTFKQLLAGENFIALCKKVALAAIAYLLSIVSYLIELKFVPSATNNIG GSQALPSLHDIPSVAYQNSYHYFSELLNQSNRLWLLLLLLLLVLFFISHLSNSKINLGLS FLYCILYLGLASLLSFGIFIVYSRNIAGDAPRYIYGFAVFVTISMLSLFNNRQVKAIYLT SLLVASLLSYYILSFVLVYSSTLNYQKEAFNRQAAVLTDDLKNVVTNERKKVYLNTFFKN STVYANTSRNYPILSKIVPPNDGLYFPNYVWFNTSSNLGLEMAPLTDTDMSKNQKVVSNH FYDIYTNNKEIFVFMK >gi|237663584|gb|GG668934.1| GENE 44 44402 - 44581 144 59 aa, chain + ## HITS:1 COG:no KEGG:EF2147 NR:ns ## KEGG: EF2147 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 59 5 63 63 87 100.0 2e-16 MRTRQKKLFLFSMILWLVEFLITRISDSFPGATPLFVVICLIQGILFTYFCLAFFYYPQ >gi|237663584|gb|GG668934.1| GENE 45 44669 - 45634 1047 321 aa, chain - ## HITS:1 COG:no KEGG:EF2148 NR:ns ## KEGG: EF2148 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 321 1 321 321 510 100.0 1e-143 MSTIHEFPKNYERFIAQGEEALVEHNQIAALENFQQAYQLQQTPPVNQKIVQLLLEMGEA DEALALAEAFQESYFENLETAAIYMQIYSQSRRFIEGYILLKQLLQTKKITLAQQKTLEQ QLMQVEEAYQQLETQQIQAIKRNLLVSDQLPVYQQLANIKTSLYLPKPVFVEVAKDLVMN QALSYFAREWFIEELALLQFSEPLTFLWYDNQPQTVLLEGKTGPLNTPIYSEICTELRNR LENDDPIMLQHLEEEIRLHLAYLYPLAETVISDPTIWVLGYLATYYPEYIEKELTEAKGH QIDAVQKVQQAIRTAFTQIML >gi|237663584|gb|GG668934.1| GENE 46 45891 - 46181 451 96 aa, chain - ## HITS:1 COG:no KEGG:EF2149 NR:ns ## KEGG: EF2149 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 96 1 96 96 150 100.0 1e-35 MENQVEVMTYAHLKEIMQALEANEAITEDTKVFIDTGWDSVQEVAPDAVSIEKVAKFTVA DVLTNESFAGYSLEEKAEKMNAEGDLETAIIIRNLY >gi|237663584|gb|GG668934.1| GENE 47 46229 - 47509 1387 426 aa, chain - ## HITS:1 COG:SP0616 KEGG:ns NR:ns ## COG: SP0616 COG2348 # Protein_GI_number: 15900524 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Streptococcus pneumoniae TIGR4 # 18 422 3 407 410 278 37.0 2e-74 MLIYLTKKDCELFDMDQFSTLTEQEFTTFAMTHPAGNFLETPEMKHLLERRGWHCEYVGV KREGQLIAACILSKKKVKIGYAFDIDGGILMDYTDKKCVEAFFTGLKKYVKKNDGLYLTF TPNKQICLRDFNGGEVEKVNQETFDYFTSIGFEHQGFDVHNFDGAPRWLFVKDMAGLTEE DLWKSYGKDAKYDIKKTWEYGVTIRELRYEELPLFKKLTEETSARRNFEDKDLAYYQAVY EEFGERAKFMVAELNFATYLENLHEKLRKLQETLNEVNEALIANPKSRKKNNQKREFEDE VRTVRKRIDEAKEMKTSDEPEILAGALFIVHPQEVVYLFSGTYEKYKQYYAPYLIQHKML TYTVENNIPKYNFYGVDGIFDGSDGVLKFKQSFGGHVEELMGNFQWKAKPMKYALYHALK TIKEKV >gi|237663584|gb|GG668934.1| GENE 48 47778 - 49586 2161 602 aa, chain - ## HITS:1 COG:SP0266 KEGG:ns NR:ns ## COG: SP0266 COG0449 # Protein_GI_number: 15900200 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Streptococcus pneumoniae TIGR4 # 1 602 1 602 602 739 63.0 0 MCGIVGMIGKENVTESLIQGLTKLEYRGYDSAGICVNDQSQQPHVVKAVGGIADLAAKLT PEIDGTVGIGHTRWATHGEPTVANAHPHVSSDQRFALVHNGVIENFEELKEQFLSGAHLI GDTDTEIVVQLIAHFAENGFSTKDAFKAALAEIKGSYAFALMDKMDPNIIYVAKNKSPLL IGLGEGFNVICSDAMAMIKETNQFVEIVDGEIVTVTADKVVIETPEGQVINREPFEAQLD LNDIEKGTYPFYMLKEIDEQPAVMRKIVQAYTQGEKVTLDEALLEKINQCNRIYIIACGT SYNAGWVGKSLIETIASIPVEVHLSSEFGYNMPILSEKPFFIFLSQSGETADSRQVLVQV NELGHPSLTLTNVAGSTLSREADDTLLLHAGPEIAVASTKAYTAQIAVLAILAKAIGEER QTLAAVSFDVAHELSVVAAVMETLIDEKQQMKALVEDYLTYTRNAFYIGRGVDYYVSMEA ALKLKEISYIQAEGFAAGELKHGTIALIEEGTPVIGIVTDAKVAAHTRGNLKEVESRRAR NIVIALESLAKPQDQLIIPDVHPLLSALVSIVPGQLLAYYATLQRGYDVDKPRNLAKSVT VE >gi|237663584|gb|GG668934.1| GENE 49 50029 - 50862 851 277 aa, chain - ## HITS:1 COG:SA2475 KEGG:ns NR:ns ## COG: SA2475 COG0619 # Protein_GI_number: 15928269 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Staphylococcus aureus N315 # 1 277 1 277 277 312 57.0 5e-85 MSERQMLGYHPDSTWIHRLNGTSKLVFLIVVSVACMTTYDTRYLLGMSVVSLVLLKLSNI KWHQISFVIKFIAIFSLLNILTVYLFAPEYGVDLYQSRTVIWEGIGRFTLTQEELFYEFN LVLKYFCTIPLALIFLLTTNPSEFASSLNRIGVSYRISYAVALAIRYIPDIQEDFFNISL AQQARGYEMSKKGRLGQRIKGVAQIVLPLILSSLDRIETVSTAMELRRFGQKKNRTWYAQ QPFHLRDFSVMILALCLLGISFWLFHVNGGRFYNPFQ >gi|237663584|gb|GG668934.1| GENE 50 50859 - 52565 278 568 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 305 556 134 384 398 111 31 2e-23 MKKPIITFNNFSFQYHSQSEPTLKGIQLTIYEGEKVLIVGPSGSGKSTLAQCINGLIPNI YEGEIQGTATVAGKNIQETSLFDLSFDVGTVLQDTDGQFIGLTVAEDIAFALENDAVEQA EMKKAVQKWSEIVELNQLLQHRPQDLSGGQKQRVSMAGVLINQSKILLFDEPLANLDPRA GQETMTLIDTIQQETKATVLIIEHRLEDVLCESVDRIIVMNEGTIISDTTPDELLRQDTL TQQGIREPLYVTAMKYAGIDLTQVSHLDKLAEVSGETVLPKMTQWSVQPSSVSAVKGAEL LRLEQVSYQYDRHGEKVLDDFSVTIHHGEMISIVGKNGAGKSTLSKIICGFITPQSGKIL WEGQDFSNYSIKERADKIGYVMQNPNQMISKKMIFEEVALGLVLRDVPQAEIEERVTNIL HICGLYPFRNWPISALSFGQKKRVTIASILVLEPELLILDEPTAGQDFKHYTEMMTFLEE LNRLGVTILMITHDMHLMLEYTTRALVVCDGRLLADATPVAVLTDEKLIQAASLKETSLF TFAKALGLENPLLFTEKFVAYDREVRFG >gi|237663584|gb|GG668934.1| GENE 51 52666 - 53217 405 183 aa, chain - ## HITS:1 COG:SA2477 KEGG:ns NR:ns ## COG: SA2477 COG4720 # Protein_GI_number: 15928271 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 2 183 3 184 184 234 67.0 4e-62 MKEKMSVKTIVAIGIGSAVFVILGRFVVIPTGIPNTNLETSYPFLALMSVVFGPVAGGLI GLIGHTLKDFTTYGSAWWSWIICSGIIGIIFGFAGRKMDLQHGEFTTNDMVRFNIFQAFG NIVVWGLIAPSLDILIYSEPASKVFTQGVFATVSNIVAVGIIGTLLMKAYASTRTKKGSL SKD >gi|237663584|gb|GG668934.1| GENE 52 53447 - 54802 1924 451 aa, chain - ## HITS:1 COG:SPy1038 KEGG:ns NR:ns ## COG: SPy1038 COG1109 # Protein_GI_number: 15675035 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Streptococcus pyogenes M1 GAS # 1 451 1 450 451 606 71.0 1e-173 MGKYFGTDGVRGIANKELTPELAFKLGRYGGYVLSQHEDSSRKPRVLVGRDTRISGEMLE QALIAGLLSVGIEVFQLGVISTPGVAYLTRLQKASAGVMISASHNPAEDNGIKFFGADGF KLVDDQEAEIEALLDAEEDTLPRPSAEGLGSLDEFPEGLLKYSQFLVQSIPGDLADMTVC LDAANGATATAVNRVFADLETDFYTMGTSPNGLNINDGVGSTHPEALAEMVVEKGADAGL AFDGDGDRIIAVDELGRIIDGDKIMYICAKYLAEKKRLKKDTIVTTVMSNLGFHKAVEEI GLKDVVTQVGDRYVVEEMRKNDYNFGGEQSGHMIFLDYNTTGDGMLSGIQLLNVMKQTGK KLSELADEVTIYPQKLVNIRVTDKNGAMEVPAIKAVVEQAEAEMNGEGRILVRPSGTEPL LRVMAEAPTQEKVDYYVDKIAEVVRAEIGVE >gi|237663584|gb|GG668934.1| GENE 53 54795 - 55958 1370 387 aa, chain - ## HITS:1 COG:SPy1037 KEGG:ns NR:ns ## COG: SPy1037 COG4856 # Protein_GI_number: 15675034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 2 312 3 314 318 147 33.0 3e-35 MRKASQKSWFNGLLSLLFALLLFFNANATGNNPSNSGSSQTYSETLNNIPVQVQYDKDKY YVSGFEESVNVHLRSANRIQLNMESNADTRNFQVVADLTKLPLGTSEVPLTVRGLSSAVT AEIEPKTVTVTIEKRVTKKFDVEAQLSDNIEKEGYKVKNISVDPKTVEVTTGEETAKAID KVIAPVSSAKQTIDTIKQTVNVQALDAKGQVLSIENPAPQVKVTVGLTAPTKDVPLNVSM TGTPPAGIAHYNYSLSTYQVRVSGPQSILDTLESIEVPVDISDIRKETKQSVTIPVNGEY VVTPDEVDVSLTPVYNQQQSSNTNETSGEPASSTTVGSGSQAVQPSTSSQVESNTSETTS EGSTVESTTAGSTENTENQVTKENQNG >gi|237663584|gb|GG668934.1| GENE 54 55955 - 56839 928 294 aa, chain - ## HITS:1 COG:BS_ybbP KEGG:ns NR:ns ## COG: BS_ybbP COG1624 # Protein_GI_number: 16077243 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 30 268 14 253 273 291 60.0 9e-79 MSFQLNQLLDLNYWQQVISTDFLSKDFVINIIDILVVWYLVYKLIMLVRGTKAVQLLKGV AVFIIIRILSEIIGLHTLSWLMNQVIMYGVIAAVVIFQPEVRRGLEHLGRSSFFRPNKGA QQEDERIIQAFDKAIQYMSKRKIGALITIERNTGLDEYIETGIDLDADITGELLINIFIP NTPLHDGAVIIKNEKIAVASAYLPLSESNLIPKEFGTRHRAAVGISEVSDAITIVVSEET GDVSLTLNNELIPGLTQEEYLTILRKELISESSEDKKSALQHFIDDVTKGVKRK >gi|237663584|gb|GG668934.1| GENE 55 57036 - 60725 3790 1229 aa, chain - ## HITS:1 COG:lin0824_1 KEGG:ns NR:ns ## COG: lin0824_1 COG0674 # Protein_GI_number: 16799898 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Listeria innocua # 1 416 1 414 414 610 70.0 1e-174 MRKMKTMDGNAAAAYISYAFTELAAIYPITPSSTMAELVDQWSAEGKKNIFGQPVKVVEM QSEAGAAGVVHGSLKTGALTTTYTASQGLLLMIPNMYKIAGELLPSVFHVASRALTTNAL NIFGDQGDVMAARQTGFAMLSESSVQEVMDLAPVAHLASIEASVPFMNFFDGFRTSHEIQ KVAVLDYEELAPLVNQEKLAEFHRRSMNPNHPSVSGMNQNPDIHFQQRETINPYYEKLPG IVQKYMTEINRLRGTNYDLVTYYGAEDAEEVIVTMGSVAQTIEQTVDYLQQQGRKVGFLN VHLYRPFPIETFLEKVPQSVKAIAVLDRTKEPGAGGEPLLLDVQSAMYEADIRPTIIGGR YGLGSKDVLPNQIVAVFDELMKERSAMKKRFTIGIDDDLTYTSLEVGKPLDLTNPKTYQA KFWGFGSDGTVGANKSAIKIIGDHTDKYAQGFFYYDSKKSGGLTVSHLRFGETPIRSTYL IEHSDFVACHTAAYLHTYDLVKGLKKGGTFLLNTIWNDEQLARFLPNQLKRYLAENEIQF YTINAVKLASEVGLGGRINTAMETAFFKLAEIMPFEQVLPILKEEALKSYGHKSMKVVEK NIQAIDKTVELLHQVPVPAEWRTLEVQPRKRSENVSDFVHEIVEPINRQEGNALSVATLA KNGMTDGRMPLGTAAVEKRGVALEVPEWISDRCTMCNECAFVCPHAAIRPFLADEEEMTE APEGFIVRDLRGADGLKYRIQVSVKDCTGCGLCVEACPAKGKALVMKPYEEEKEQAMNWA FAMTLRQKENPAKPNTVLGSQFNKPLLEFSGACSGCGETPYVKLLTQMFGDRMLIANATG CSSIWGAAAGVTPYTTNEQGQGPAWSNSLLEDNAEFGYGMLLATQARRERLASKMTKAFS VASDSLRLLMEDWIAHLSESEGTQQRAAKLRAALLEEKTNQPLLEAIYDDQDLFVKPSQW MIGGDGWAYDIGYGGIDHVLASGADVNMLVLDNEVYSNTGGQTSKATPASAIAKFAASGK YASKKDLGMMAMTYENVYVAQIASGANQMQTIKAFEEAEKFPGPSIIIAYTPCITHGLAG GMSQTLKEAKDAVHSGYWSLYRYNPLLREKGKEPMILDFKKPDFSLMKEFMRQQVRFASL ESSQPDTAELLFNKTINDAKRRFYNYARLAGQEEKIRAKLEKQSEPEINTPENEKPRVKK ERVVDPEAEARRAARRAERAAKRKQREQD >gi|237663584|gb|GG668934.1| GENE 56 61025 - 62365 1440 446 aa, chain - ## HITS:1 COG:lin1337 KEGG:ns NR:ns ## COG: lin1337 COG0174 # Protein_GI_number: 16800405 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Listeria innocua # 7 446 5 444 444 714 75.0 0 MTRKAKTAEEIKHIAEEENVRFLRLMFTDIMGTIKNVEVPVSQLDKVLDNKMMFDGSSIE GFVRIEESDMYLYPDLSTWMIFPWESDHGKVARLICDIYNPDGTPFAGDPRGNLKRALAD MKELGFTSFNLGPEPEFFLFKLDENGEITTDLNDKGGYFDFAPTDLGENCRRDIVLELES LGFEVEASHHEVAPGQHEIDFKYADVVDACDNIQTFKLVVKTIARKHGLHATFMPKPLFG INGSGMHCNMSLFNEEGNVFYDESGEMGLSQTAYHFLGGLLKHARAYTAVCNPTVNSYKR LVPGYEAPVYVAWSGRNRSPLIRVPESRGLSTRLELRSVDPSANPYLTMAVLLQAGLDGI RNELTPPPAVDRNIYVMNEEERQHAQIEDLPSTLHNAIKELRKDQVMIDALGRHIFANFV EAKRMEWAAFRQTVSEWEREQYLELY >gi|237663584|gb|GG668934.1| GENE 57 62408 - 62791 394 127 aa, chain - ## HITS:1 COG:SPy1878 KEGG:ns NR:ns ## COG: SPy1878 COG0789 # Protein_GI_number: 15675697 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 115 1 112 123 144 67.0 5e-35 MREKELRRSMSVFPIGTVMKLTDLTARQIRYYEEQGLIHPERSEGNRRMYSLNDIDVLLE IKDYLSDGLNMAGIKRVYEMKLEEQKNTAEATRPLTDADVRQILYDEILSQGGLTQQNPF QSNVPRL >gi|237663584|gb|GG668934.1| GENE 58 62994 - 64235 582 413 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 24 390 30 406 425 228 38 8e-59 MTTHEKVILVGVETEKNYQTFSASMEELANLTETANGEVVFVLTQKRPQVDRQTVIGKGK LEELIQLTDAYEADLVIFNHELTPRQNQLLSEALAVRVIDRVQLILDIFALRARSKEGKL QVELAQLDYLLPRLAGQGKQLSRLGGGIGTRGPGETKLESDRRHIRNKILGIRRELKEVT AHRERSRQKRQNSELFQIGLIGYTNAGKSTILNMLTTAGTYSEDQLFATLDPLTKKWQLP QGMEVTLTDTVGFIQDLPTQLIEAFQSTLEESRTMDLLLHVVDASAPDRLQHERTVQTLM KELALENIPCLTVYNKRDQVDSKEFVPTLFPNVLISTKISEDKERLVQAIRAQMMELLEP YQLEISPTDGQLLSELRRMTLMISEEYAENENRYIVKGFAKKKSKWLAESEKE >gi|237663584|gb|GG668934.1| GENE 59 64239 - 65168 840 309 aa, chain - ## HITS:1 COG:L15012 KEGG:ns NR:ns ## COG: L15012 COG0324 # Protein_GI_number: 15672608 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Lactococcus lactis # 3 297 5 288 294 280 53.0 3e-75 MEKVLVIVGPTAVGKTALSIALAKKFNGEIISGDSMQVYRSLDIGTAKVTETEKEGIPHY LIDCREVSETYSAADFQKEGRQKIKEITEKGKLPIIVGGTGLYIQSLLYDFQLGSREIDD SPEIRETYNLFAEEKGNQALWLLLQQKDPLAANSIHFNNRKKVIRALEVFDKTGYSILTP KEKPARLYDYYLLGLETDRALLYERINQRVDQMMTEGLLEEAKQMFQQPHAQAAQGIGYK EFFPYFSGEQSLEMAVETVKQQSRRYAKRQLTWFRNRMAAHWWNLVQQPTDLPKLEKEVA EWLQQKESE >gi|237663584|gb|GG668934.1| GENE 60 65169 - 65915 676 248 aa, chain - ## HITS:1 COG:L1007 KEGG:ns NR:ns ## COG: L1007 COG0584 # Protein_GI_number: 15672046 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Lactococcus lactis # 2 247 34 281 281 221 45.0 1e-57 MTDIIAHRGSKGTHPENTCIAFREAVRVGAEGIELDVHLSKDGYLIVMHDETVDRTTDGH GEIQQLTLNELKQLDAGSWFQKNPSVQCVPTLEDVLNCLVEEQFNGFLNIELKTDIIHYE GIEKKIVQQMKQKNWPFRYLYSSFYFPSLVKLKKADPKTEIAFIYESAEDLSQAGPAFAL VDSLHPKMSWVLAHEKELITIGKPLRPWTVNRMEEMENCFQLKLAGVHTDFPEEAKFARQ NWQEEGET >gi|237663584|gb|GG668934.1| GENE 61 66024 - 67835 1210 603 aa, chain - ## HITS:1 COG:no KEGG:EF2164 NR:ns ## KEGG: EF2164 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 603 1 603 603 1080 99.0 0 MKVKLNKKKIFICSIIITFLVMLTLNNLTPLLADDYEYLYKTKSWMTILIDEYNQYMTWT GRSVVHVIARIFLLLPKGIFNVFNALAYTIVTYLVYRLTLQKQDKKYNSFKFIIIQVLFW LFTPAFGEVFLWETGSANYLWGSLIILSFLYVYHREIIEEHVFTKTKLMIFLMFALGILA GWCNENTSGGALLIVLGYLGWQFYTKRKLSLWMFTGVAGNTIGLALMALAPGNKIRATYF ARSTWSLPRKLMTGIITIFEQMKEHLSLFLLILILLLVLYAYISQDKKRVYLSVVYFISG MATMLVLAISPAALDYGRSYYGAVLFLIIAFSMSLPNYKVNIRFSPIYSVLYVILVCTFF MNVMVGVSDVFLSKLDLTKQYSYLVEQEKKGNINPVFPDISYSNTTKYSAYSNHLSHVKT NSDAQVNRSVAKYYGLESVRSVSEKDWDNIYRNGNPELMNIFNLNDYLQKLIDTQYTILL SGYGNQVYLSQAEESLLKDLGVDVKFEGNNAWTLSAVISKDNKTFETNAELSRLTGKIEA LNYDVFSSYTNYENQTFASVKINDTEMSRNKKGLNFVIIDSNTNKVIDSVNFDITEKNAP GMR >gi|237663584|gb|GG668934.1| GENE 62 67832 - 68797 947 321 aa, chain - ## HITS:1 COG:L12335 KEGG:ns NR:ns ## COG: L12335 COG0451 # Protein_GI_number: 15672193 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Lactococcus lactis # 3 315 6 313 313 386 63.0 1e-107 MRNFLITGGAGFIGSTLANYYSKDNQVVVIDDLSMGQTENLNASENITFIEGSVTDQQLM EKVLQEYQFDYIFHLAAIASVADSVARPVETHQVNFESVLQLLELIRKYQKDLKRLVFAS SAAVYGDEPTLPKQEESVIRPLTPYAVDKFASEKYVLNYCHLYDVPTSAVRFFNVYGPNQ NPNSPYSGVISIVMDSYKRLLANQEVTFNIFGDGKQSRDFVFVEDVVQALNLVAHSDQSL GEVYNVGTGKATDLNELISSLNDIMKVTLPVEYKEARAGDIKDSLADISKLRAIGYEPKY SIQSGLDKYVKYELKAEGKQR >gi|237663584|gb|GG668934.1| GENE 63 68898 - 70319 812 473 aa, chain - ## HITS:1 COG:no KEGG:EF2166 NR:ns ## KEGG: EF2166 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 473 1 473 473 782 100.0 0 MNSKAKMVAKNLYYTVAANFATLGISVLLNLFVPKLLGVTEYSYWQLYVFYSSYVGFLHL GWIDGIYLKIGGEEYENLDKRNLGSQFWYLAIFECCISAFVILWAYFFMPKEYQGIILIL TAIVSVITIAKTFILYVFQSTNRIKEYAQLSRNDRYLYVLFIAIYFALGGRDFYWLIIMD ILSKLIITVWGMFRVKDMLRVNMMSLKEVTPEIVDNINIGSKLMLSSIASMLIMGTIRFF VQQRWTIETFGKLSFTLSLSNMFLTFINAVGIVMFPLLRRTNKERLPSLFVTLRGVFVPL TYAILLLYVPVKFVLGMWLPEYSESLKFMGILFPIVIYEGRMSLLINTYLKTLRKEKTIL FVNVLTLALSLILSLFVIFVVGNLNLTVGLILVSLAFRCNLAEIFLCKDMNIKIGNSTAL ETLVTLLFIFSNLWFGGSIYSFISYAIVYIIYFLFIHKSFVNNAKNLKYLVKG >gi|237663584|gb|GG668934.1| GENE 64 70330 - 71301 651 323 aa, chain - ## HITS:1 COG:SPy0787 KEGG:ns NR:ns ## COG: SPy0787 COG0463 # Protein_GI_number: 15674831 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pyogenes M1 GAS # 9 108 5 103 310 78 43.0 2e-14 MKQQYTATVVMATYNGEKNILEQLDSLKNQSKKIDEVLIWDDCSTDSTVKIIENFISENK LGETWHLQINTENLGWRKNFFNLLNAATKEIVFTCDQDDIWDASKIEVMCEAFANTDVKV LVSDYTELVEPGGLAEELKKIDSVKLPNQKAEQIIFNENNLFLRRPGCVYAIRKSFIANV NLYASEMENPVHDMAMWGSSLLSDGLYIVREELIRWRKHGQSSFKKEIDLAKKQNHFEER LNTLRRRLQRTEAAKNYLNNQPHVEEFEYKDKVLSNLIKELNMRVSLLERKKIIPILCAF FKYHHKFYFSTDIYHIMKYKIRK >gi|237663584|gb|GG668934.1| GENE 65 71341 - 72165 578 274 aa, chain - ## HITS:1 COG:L15884 KEGG:ns NR:ns ## COG: L15884 COG3475 # Protein_GI_number: 15672196 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Lactococcus lactis # 1 274 1 273 278 159 37.0 5e-39 MQKLTLKEVQAKAVEILVYIDNICRSNNLHYTLFYGTLIGVERHKGFIPWDDDIDIVMPR PDYELLIKILKNDSNYQLLSFETRKHFRYPFAKLVDPNTVAHSKQYFGGEDKDLGVFVDI FPIDGIPDTQKERNELRKITEQYRLNLMDTLGLSYARSFHLSKALIKLITRYPNHFKVKK VGNNQYWRDLYQTEAKKTPFGATKHCGYLEWIHIDWGVFPNEWFLEYEDVEFEGHKFMAI KNRKQFLTLRYGDYMEMPPVEERITHHPYDFYQK >gi|237663584|gb|GG668934.1| GENE 66 72220 - 73647 711 475 aa, chain - ## HITS:1 COG:no KEGG:EF2169 NR:ns ## KEGG: EF2169 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 9 475 1 467 467 845 100.0 0 MIINLSQQMQKIEKRIAIPYIVFFELVLICRMVSIYSTLPTKIDSLFTLIIMLLSGVYFI CHFLPIFIEKKQRRIEYWLIAFIGILFLTTFINHTYAFSENIKLIIWQCIFFFSVYEVGR SNDKSVFKAFEYVLLIVWTALVIVGLYLFFARISFSKPVESLYYGMRIGFFENRLYGVFV EPNYACTISLVCILVGVRNFINTNSKWLKVVCAMVIFLQFSYVALSGSRSGVIQLISMVI FGMFFTIWFFQKNTSKAVIKKVVQAVLVSFFCGAIVFGGLQLIEKGYIATANSVNIEVPK VLDNKENEILGNKKITTKRPDVEGKDDISNSRFALWQSAIDLMKLNPIFGTSPKGFADIA KDKLPQSHIAKTAQTPHSFFFYLLAATGISGTIVFLIFLLSKMFNSAKLLFSVRIKNYMD FVLDNQIVLVILISGLLITEVILTRRFATVIFWLYLGKIQYRTDMENDLIRGNEQ >gi|237663584|gb|GG668934.1| GENE 67 73691 - 74665 750 324 aa, chain - ## HITS:1 COG:SP1365 KEGG:ns NR:ns ## COG: SP1365 COG0463 # Protein_GI_number: 15901219 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 4 322 6 324 328 219 40.0 6e-57 MPKISIIVPVYNVEKYLEKCVRSILAQTFTDFELILVDDGSPDSSGAMCDQFAEQDQRVK VIHKENGGLSDARNAGIEIATGEYLGFVDSDDYIADDMYELLYTNIVKEDADLSICGIYD VYEGKEPIVKSLIQGTFSREEALLLILQGNIISVHAVNKLYKRKLFADLRYPKGKYHEDS FIIVDLLSECQKVSIDSTQKYYYYHRMGSINTETFSDKQFEFIEAWEKNELKLKGKGAVI EEAAHQRVCFANFLVLDKILISNAPKKKETKQIVRYLRENFIFIMKNKVFTKSRKLSMIL LMFGLPFYKIPIKLKRKYIEKTID >gi|237663584|gb|GG668934.1| GENE 68 74667 - 75725 979 352 aa, chain - ## HITS:1 COG:slr0809 KEGG:ns NR:ns ## COG: slr0809 COG0451 # Protein_GI_number: 16330703 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Synechocystis # 30 292 22 271 328 130 31.0 3e-30 MLFTDDNYLSDVERVLEKTPDWTKVTNKSVFITGASGMIGTFLIDVLMYQNKTRNANISI WAMGRTLSRLEERFTSYLEDPLFHIVIGDVTEEIQIAEACDYVLHCASNTHPKSYASDPI GTIMTNIAGTQHILDYAVKANSEKVLFLSTVEIYGENRGDLDKFTEDYCGYIDCNTLRAG YPEGKRASESLCQAYIQKYGIDVVIPRISRTFGPTMLLSDSKASSQFIMNAVHKENIVLK SAGTQLYSYAYVADIVSALLFLLVKGQKGEAYNVSNEHCDITLRTFAETLANVAGTKVIH GEATVQEKQGFSKATKALLDNQKIYALGWRPLYDSMEEPLKHTIKILEGSGN >gi|237663584|gb|GG668934.1| GENE 69 75738 - 76442 210 234 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 4 234 6 228 234 85 27 1e-15 MITALIIAGGVGKRMGQEIPKQFIMVEEKPIIIYTLESFQKHPLIDRILVVCKKGWEQTL DAYAKEYHIDKLQWIIPGGNSGQESINNGVNFLKEHSNPEDTIVIHDGIRPLVDELVLSD VIVKCQEYGNAVTSLPYNEQIFVKETEETTRQYINRETLRRVSTPQAYKFEKLTWAYEKA FRENIGISESSYTNTMMVDLGETLHFALGSDKNIKLTTQDDLQLFKGFLKMKEE >gi|237663584|gb|GG668934.1| GENE 70 76909 - 79590 1922 893 aa, chain - ## HITS:1 COG:no KEGG:EF2174 NR:ns ## KEGG: EF2174 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 893 1 893 893 1583 100.0 0 MKKIISGMLICTVLLNSFSVIASGEELVKTETTGETGLVTQATSETTTNSTEDTSSVTEE NTSERDSSTSSTKEESLDSSTNSTTEEHSSVSETNTTDSKTEASQSSEVEKKTIDQDEAD YQEAAREGTNHKKGTYAMKNGLSSRVARATVANVYANDPNLPGKNFIDVSSWNGDISVAE YQKIKSYGVTGVSVKLTEGTWYVNPYAAGQIRNAKAAGLKVSAYHYSMYVSAATAQDEAR YFAQAAANSGLDKNTIMFNDAEDPTLTNNGRNAHANSVAFNQQLKALGYKNDALYVGKWW LTNGYIDTSAFGRDRVWVAQYPYTPDSSMQWNNDHGAWQWSSQMYFPGLANYEGRPFDIS MTYSNFLNMGNSSGPDLSKYYTTNPGRVIMKNDDTFYQDVAFRTPGWRVKKNTLVTIKGI EYSSAGIPRLVTDQGYLTANKDYVLAAQSNIDLYFTTNPKKVRLKSDDYFYADPEFKQRL SKVSKGTIVEVEDLAYTQSGIFRLKTAKGYLTANKNIVEQYKGLEDTYYTSNPGQVITRN EDTYYKDVEFKTKANKVSAGSVLKVTAIEKTKSGIPRLKMANGYYFTANKNYVVATGSWI ANYHTVNPGQIIMKNSDNFYGDSDFLYKGAAVSKGSLVPVVGIEYRENQVPRLITQNGYL TANKSYAQKVVPNIKDYLYDYPEYVVMKTNDYYYQDVNFSKKGEFVSKDTLIKVLSVDYT ENGLPRLKTAKGYITANKSYVTKLVSNSDNYFTENPHQIIMRVSDKLYTDVEFRNGSRTL SSGTVVPVKGIEYSSKGVPRLKTEGGYLTANKNYVTAAGNTNNNYFITNPKKVKLLIDDC FYNNTEFTKKGQAVKKNTIVEVEAIEYTNNGIPRLKTKQGYLTANKWYVAKVG >gi|237663584|gb|GG668934.1| GENE 71 79834 - 80682 639 282 aa, chain - ## HITS:1 COG:SP1367 KEGG:ns NR:ns ## COG: SP1367 COG3475 # Protein_GI_number: 15901221 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 7 279 5 275 281 328 57.0 7e-90 MEQTTQTQLVEIQQVVLRMSKYFVAFCEEHNLTCYFCGGGCIGAIRSQGFIPWDDDLDFF MPRPDYEKLKVLWPKYADTECYPLLVASKTYNDHNSFMTIRDAQTTFIKTYQDGLAIPHG IPIDIFPLDGAPKGNFQRKKQKIWALIYALFCSQVVPEKHGGILATGSRVLLNIFPSKKV RYHIWRFAEKRMTKYSFGSTPYVTELCVGPRYMGNIYHLEDFKSAIFVPFEDTKMPIPVG YKRYLTEVFGDYMQLPPEEDRQPHHEALIVDTKKSYTEYLKK >gi|237663584|gb|GG668934.1| GENE 72 80698 - 81135 343 145 aa, chain - ## HITS:1 COG:BH3661 KEGG:ns NR:ns ## COG: BH3661 COG0463 # Protein_GI_number: 15616223 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus halodurans # 4 141 116 254 257 79 32.0 2e-15 MDGRKKLLFTCSSYFVCNENGNITHERNFSEGPQTYQDLLKTNTIGCLTVVVESNLLKRH LMPDLKHEDYATWLNILKEINTVYFINEKLAIYRKLTTSTSSNKWNTISWVWKILRQNEQ FSVIKSSFYLMRFLFYTTFKYAKNE >gi|237663584|gb|GG668934.1| GENE 73 81015 - 81455 388 146 aa, chain - ## HITS:1 COG:PH0430 KEGG:ns NR:ns ## COG: PH0430 COG0463 # Protein_GI_number: 14590346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Pyrococcus horikoshii # 1 109 1 109 334 119 52.0 2e-27 METALVSIIMPMYNAGKFLSKSIESVLEQTYQNWELLLIDDGSKDDSIDIALAFMEKDSR IFLLKNEQNMGIAKTRNKGIEASKGQYIAFLDSDDLWLPNKLEVQVKWMEEKNFYLHVVL ILYVMKMATLLMSVILVRDHKPIKIF >gi|237663584|gb|GG668934.1| GENE 74 81590 - 82987 1165 465 aa, chain - ## HITS:1 COG:CAC2330 KEGG:ns NR:ns ## COG: CAC2330 COG2148 # Protein_GI_number: 15895597 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Clostridium acetobutylicum # 1 450 1 449 461 282 36.0 8e-76 MTSKSEWSNARRIVIILADVLLYNLSIILGFMVKFGREIPSFNFVAYEKSAIYISIFFIF LNLLLGAYIFYNRKISDIIFVTVIGQILMTLTIMIVTFAGRWFTFPRSVLGYSFIIGIIV LSLWRILVYYLYLKVSNERKVVLLGKENQVMRSIQNFMSDKNNKHKVTSVVVSNYYENLK KIIDEIDIVYISSNVDENEKVKLYQLIVKHKKKIFLDTSFENLIMLKPNMMNFEDESIIE VSNFEIQPEENFIKRLFDILVSVCLFVITSPLMLIAAILVKATSPGPVIYKQTRITLDQR EFSILKFRTMSATAEAKSGPVLSTSNDSRVTTVGKYLRALRIDELPQLINVIRGDMSIVG PRPERPFFVDQFNQENPNYYLRHNVRAGITGYAQVYGKYASDYNSKLNFDLLYIKNYSLL LDMKILLQTIKILFDKVSSRGLDESEEREELTMDYCKENAIRIYR >gi|237663584|gb|GG668934.1| GENE 75 83093 - 84394 1102 433 aa, chain - ## HITS:1 COG:no KEGG:EF2178 NR:ns ## KEGG: EF2178 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 433 1 433 433 810 100.0 0 MGKVLNRIGRLILLVTMIGSYTMWVVGIDAPVTKYMYANSSILLLIAVILVLLLNCTKLK FIDWLTVALALATWLLFHFTESIRHSTMQTDTMIPLIILLVLCFKVCVFDRLDQTLLLIV SLVALSATLYRMSVELPQLIPADEIFKESNKLESIWINTNTIGATLMFSTMMASSLIKAY RNKVFNLLLLPVYIGGVLGTWVSQSKTSFAILVGFILVDNLLPKRFLQRSKVWLFGFVGV AALGPLLFYLCAESDTVDLFTGRERIWHEFFAKWLSDPQHIKVGMEPFVASWKPLGTHNA FLFTLSNFGVIGYLILFGFLVSMILLIGFRKKTLDRLQVSLLLGFLLIWIHSFMEDILLA PHWMPIVYSFLGLAFYFRPEKKRGRHERPTTPKRRKRVKQTSPVSNEERPIAPVDEEGWD QPEELSRVQRHRR >gi|237663584|gb|GG668934.1| GENE 76 84423 - 86393 1886 656 aa, chain - ## HITS:1 COG:no KEGG:EF2179 NR:ns ## KEGG: EF2179 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 656 1 656 656 1251 100.0 0 MEQQLTTRKEKQPLRNQAEQSARLVDHLLRWRYLLAAVIFILLVAFKVHGSSLNMWDAYV SEYADGQKSSLIAGEPRGVRSDEWLVQTPFSLSQTQTGLKTHNDVITLNGQDMVVGYNSP AWNLATLAKPFTWGYVLLGKEYGLSWYWNLKLIGLILFSFEIGLIVTRRNKYLALLASVW IPFSSALQWWFVSPVGDLVFFGLGFLVGIYNYFYYHSSVRRRVICAITAVIMASGFVLVI YPALQVPLGYLILLFLILFFLEFRKKIKLDKWDGVLIGGALLMTAIIVGGSLYGSLDSLK AVMDTAYPGKRVSLGGDMPKRDILLFLTNWKMPFQDVPYSNNSEISSFYQLFFVILPLSP FIFYKKIKENIYGFVLFVYCLFNLVWMSVQFPTIFAKLTLWSYVPEQRAMLSFGFAAVLL SLWFIDYLWNRQAKIPMMAWLGALGLNVVLYFFVLYTGNLRLYVTRMDIIGVLVVATVLI VALFKRWRTLFVLVLLGIIMVSGAFVNPISRGVSAVYGKKLAVEVEEINKKDPNQLWVGE RLMYGYLPMLGVHTFNGVAFTPDLEAWKPLDPKGKDTFIYNRYAHINVEVGNQTPVLELM QKDAIIARLSPEKLKEYGIKYAVVYKPLEPLDTPTIHFEKLYGPDQNGAYIYRIND >gi|237663584|gb|GG668934.1| GENE 77 86427 - 88262 1858 611 aa, chain - ## HITS:1 COG:alr4487_2 KEGG:ns NR:ns ## COG: alr4487_2 COG0463 # Protein_GI_number: 17231979 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Nostoc sp. PCC 7120 # 78 471 1 392 519 213 33.0 1e-54 MNKKYPVIPGTEDKVTRLWIKAKKGFKYMAKNGISHTIQRAKIEKLRNQASYPNWLARNE VLDIEAMTQEIATFHYQPKISIAMPVYNVEEKWLRLCIDSILNQVYTNWELCMADDASTD PNVKKILTEYQQLDERIRVVFREQNGHISEATNSALAIATGEFVALLDNDDELAINAFYE VVKVLNENPELDLIYSDEDKIDMDGNRSDPAFKPDWSPDLLLGTNYISHLGVYRRSILEE IGGFRKGYEGSQDYDLVLRFTEKTTKERIKHIPKVLYYWRMLPTSTAVDQGSKGYAFEAG LRAVQDALVRRGINGHATHGAANGLYDVYYDIESEKLVSIIIPTKNGYKDVQRCVSSIIE KTTYQNYEIIMADNGSTDPKMHELYAEFEQQLPGRFFVESIDIPFNFSTINNRAAKKAHG EYLLFLNNDTEVITENWLTLMVSFAQQERIGCVGAKLLYPNNTVQHAGVILGLGGVAGHG HYGYPHGDLGYFGRLAINVNYSAVTAACLLMKKADFDAVGGFEEAFTVAFNDVDLCLKVQ ALGRDNVWLHEAELYHFESQTRGYDDKGKKKKRFEQEKVMMEEKWGPLIENDPFYNPNLT RDIPNFSLRID >gi|237663584|gb|GG668934.1| GENE 78 88255 - 88569 377 104 aa, chain - ## HITS:1 COG:no KEGG:EF2180 NR:ns ## KEGG: EF2180 # Name: not_defined # Def: glycosyl transferase, group 2 family protein # Organism: E.faecalis # Pathway: not_defined # 1 90 1 90 713 176 96.0 2e-43 MNEDIKVIFDSIYRDKTTNNLTITGWALDTITKESPTFTINNENQVSAYNIQRVLREDVN QIYQTEPAIEAGFVVTLEGIKQKKSTPFSFSIISTCYNGGFSLE >gi|237663584|gb|GG668934.1| GENE 79 88581 - 91724 3153 1047 aa, chain - ## HITS:1 COG:alr4487_2 KEGG:ns NR:ns ## COG: alr4487_2 COG0463 # Protein_GI_number: 17231979 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Nostoc sp. PCC 7120 # 554 791 1 239 519 182 38.0 2e-45 MKYDFEMETDESTSVGKIVAQIKENSDVLEFGPGNGRMTSYLMEEKKCQVSIVELDKELY DHVSQFSTDAFYGNIDENDWVEYFAGKTFDYIVFADVLEHLMNPQSALAKVKPFLKPGGQ ILITFPNLAHNSVLIDLFNNRLTWNETGLLDATHKSFYLQEGFEKVFAEVGLYIAKEDFT FNQVGYNEIPTTYEALPVEVQAAFKARPFGEVYQYFFALTAEPVEQPERVTPVNSYNEKN VHILINCGEEKETELDQPVDLQKPETKQFQLKIPEDVQLIKLFPSLTGAIVKLSMTIDGE TVPVAATNAFLVQENIYYFLDTQVPVIEVTDAQMAGKDLTVDIDYFFEGNYSERENTFIH ALLDERNQFLEEMNKQTETAPMPTGKYKRITLTKFDKMINLTIDDIARDVENNVSVIRGW AYDKQTNYPLRFSIAEASESVTYTVETEYRRDVIDMFELEGDQDYGFVITIKDPEDLPAY TLNIDTKSGQKVQYVVERPNMVQPGTKFDRAWRSIQTRGLMGSVKWYFKRQEKAEAPVDV EAVLAEIKTFQFQPKISVAVPVYNVEEKWLAACVSSLQNQYYENWELCLADDASPSEHIK PMLEKYKELDQRIKVIYREENGHISEATNSALSIATGDFIGFMDNDDELAPQALYEVVKA LNTDPTIDFLYTDEDKITENGRRFNAFYKSDWNPELILNHNYITHFVVVKRDLLEKVGGL NSAYNGAQDYDFVLRATEQATKIKHIPGMMYHWRAIESSTALNPESKGYAYVAGQKAVQA ATERRGLKAQVEIAEFYGSYKINYLYDHVPMVSLIITNDTENMSSYLRQLLEKTAYTNYE ILLPARFENQINIQNDRLRYVSTETRHGMIQAAKGEYVALLNAGLVPTKNDWLKELMNIG QQETSGLVTGRVVDARYRVETVGVSVDTDKGRLLYPEKGTPGKSLGYYYRIALPRNIQAA TEDCLLFNKQLYLNLEGINESLGKEWMGVDLSLQFASAGKRNVYVSYAILKADEKMQNHD KKGSYKELAEKWAAEALVDPYRNPKHL >gi|237663584|gb|GG668934.1| GENE 80 91714 - 92931 1196 405 aa, chain - ## HITS:1 COG:PA1386 KEGG:ns NR:ns ## COG: PA1386 COG1134 # Protein_GI_number: 15596583 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Pseudomonas aeruginosa # 11 238 13 240 422 242 49.0 1e-63 MSEYAIDIQHITKTYNMYKKPSDRFKEALSPTKKSYHDLFYALDDVTMQIKKGEMIGFVG ENGSGKSTMLKIITGVLTPTSGSMVINGKISALLELGSGFNPEYSGYENIFLNGMVLGFS REEMEERVQDVIDFADIGDHLYQPVKTYSSGMFVRLAFAVAINVDPDILIVDEALAVGDL EFQLKCMEKFTEIKNSGKTILFVSHDVNSIRRFCDRTFWLQHGKVVEYGDTMDVTTNYEN FLKKKSIKTVDREATMKDETPTPDIIEVDHAELLNADYEPLEMVTQDEKVIVKIEYTVKN DQIKKPVCGVAIRTVDNHYVCGLNTLLDGVQIPWKKGRNVFYLEYEKMSLLTGEYYFDIA FFEEHATVPLVYKTKYVTMFITGRYAGEGIVILDHKWKDTTKDEV >gi|237663584|gb|GG668934.1| GENE 81 92944 - 93738 662 264 aa, chain - ## HITS:1 COG:BS_tagG KEGG:ns NR:ns ## COG: BS_tagG COG1682 # Protein_GI_number: 16080624 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Bacillus subtilis # 18 264 17 275 275 143 33.0 3e-34 MFKETFSIFKNIFQNKKLLLQFSFNDFKAKYAGSALGIVWAFLTPLVTVLTYWFVFSVGL RSRAGDNMPFIVYLVTGMVPWFFFSDSLLSATNVFREYSYLVKKVVFNVQILPTSKILSN LYTHLFFILIGFVITTANGYYPSLYSLQLIYYLACLLVFLTAITWITASTQPFLPDIMQF INIIMQTVMWTLPILWQPTGMIATILKINPLYYIVQGYRESYLGGAWFWEHWQYSLYFWG VTIVLLLIGSTVFRRLKPHFSDVL >gi|237663584|gb|GG668934.1| GENE 82 93986 - 94327 313 113 aa, chain + ## HITS:1 COG:no KEGG:EF2184 NR:ns ## KEGG: EF2184 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 113 1 113 113 112 100.0 4e-24 MVLFIIYVFLSSAGLVLFKLGSSSLNIQLQQTIFSMNISLISLLGLFCYLISFILWMLII SRSDVSYIVPLGVACTNIAILIASNLILKETITTNALIGAVVIIVGIVIMNLK >gi|237663584|gb|GG668934.1| GENE 83 94374 - 95411 662 345 aa, chain - ## HITS:1 COG:no KEGG:EF2188 NR:ns ## KEGG: EF2188 # Name: not_defined # Def: racemase domain-containing protein # Organism: E.faecalis # Pathway: not_defined # 1 233 1 233 234 362 100.0 2e-98 MTKNNDVLDAFKFIAALSVVGIHTFPSKSILGSDLKILARFSVPFFFIVSGYFLFKKISF REKEKDKKILFNYIKRILKVYLSWLIFYIPFFIVSIMNFVKGEMDLRGKISFILSILLGY VPRIGVSWYLIALVMSVFIIYYIRSYFGEKVLLTIGIVSFLIGVFTSTYGKWYFDIEWIK QVPFYGSISFSMISTICYVIIGYFLANYVFEKPLNNLFLVLGIVIFSYVGLKEVKFAQQL GVFYDAQNYFTLPIVAVLVVILSFNLENIRIPGSDFLRKSSIIIYLAQNPIKYLLFYAAS QLGIQKLTYDNFKTYVVQVFLLIVFSYIIIKLSELRQFYWLKNLY >gi|237663584|gb|GG668934.1| GENE 84 95404 - 95769 450 121 aa, chain - ## HITS:1 COG:no KEGG:EF2189 NR:ns ## KEGG: EF2189 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 121 1 121 121 186 100.0 3e-46 MLPTVLWLALFLFAIGFFLYIIRGINKNIFLLKNALIWLLISIVLIIFAIFPHVAEWLAM AFGFETTSNFLLSVAVIVLLIMEIKNSVLISKHENRIKTLLQELSIMKSEEKWENREGKN D >gi|237663584|gb|GG668934.1| GENE 85 95769 - 96494 745 241 aa, chain - ## HITS:1 COG:L11285 KEGG:ns NR:ns ## COG: L11285 COG0463 # Protein_GI_number: 15672191 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Lactococcus lactis # 2 237 5 237 241 251 54.0 1e-66 MKVLLIIPAYNEEENILRTIASIETFKQEVTHFQHELDYVVINDGSTDGTKQILEANQIN AIHLVLNLGIGGAVQTGYKYALENEYDVAVQFDGDGQHDINSLPILLEPLAEGKCDFSIG SRFIPGNEASFQSTKMRRFGIRLLSFCIRMASGKTIYDVTSGYRAGNRKVIAFFAKRYPT NYPEPESIVHLIKKRFVIVERPVNMMERLGGVSSIRALASVKYMLEVGSAILIAAFMKEG D >gi|237663584|gb|GG668934.1| GENE 86 96553 - 97395 1044 280 aa, chain - ## HITS:1 COG:L320 KEGG:ns NR:ns ## COG: L320 COG1091 # Protein_GI_number: 15672181 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Lactococcus lactis # 1 276 1 281 299 351 64.0 9e-97 MILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAY TAVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQP NPLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLKVVDDQ FGRPTWTRTLAEFMAFVIAEKAPFGVYHLSNENSCSWYQFAKEILKDTEVEVLPVDSTQF PQKAQRPQYSVMDLSKTEALGFKIPTWQEALAQMLENVQQ >gi|237663584|gb|GG668934.1| GENE 87 97488 - 98516 1126 342 aa, chain - ## HITS:1 COG:SPy0936 KEGG:ns NR:ns ## COG: SPy0936 COG1088 # Protein_GI_number: 15674955 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Streptococcus pyogenes M1 GAS # 2 342 3 343 346 582 81.0 1e-166 MKKIIVTGGAGFIGSNFVHYVVKNHPEVHVTVLDKLTYAGNEKNLEGLPSDRVELVVGDI ADAELVNRLVAETDAVVHYAAESHNDNSLNDPFPFVQTNLIGTYTLIEACRKNNVRYHHV STDEVYGDLPLREDLPGHGEGEGEKFTAETPYNPSSPYSSTKAGSDLLVKAWVRSFNLQA TISNCSNNYGPYQHIEKFIPRQITNVLSGITPKLYGAGKNVRDWIHTNDHSSAVWAILTK GQIGETYLIGADGEEDNKTVMELILELMGQPVDAYEHVNDRAGHDLRYAIDSTRLREELG WEPEFTNFREGLAETIKWYTENEDWWRADKEAVEAKYAQNGQ >gi|237663584|gb|GG668934.1| GENE 88 98541 - 99113 807 190 aa, chain - ## HITS:1 COG:CAC2331 KEGG:ns NR:ns ## COG: CAC2331 COG1898 # Protein_GI_number: 15895598 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Clostridium acetobutylicum # 6 178 9 180 185 186 55.0 3e-47 MKVIDTKLQDVKIIEMDVFGDHRGFFTESYSKAKFAEHGLDFDFVQDNHSLSTEAGVLRG LHFQKGEAAQTKLIRVVTGAVLDVIVDIRKGSPTYGQWEGYILSEHNHRQLLVPKGFAHG FVTLTPNVNFMYKCDNYYNAAADGGIAFNDPALAIDWPIAPEKAITSEKDQKHPTLKEFE AENPFIYGEI >gi|237663584|gb|GG668934.1| GENE 89 99126 - 99992 1045 288 aa, chain - ## HITS:1 COG:L197041 KEGG:ns NR:ns ## COG: L197041 COG1209 # Protein_GI_number: 15672176 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Lactococcus lactis # 1 285 1 285 289 461 79.0 1e-130 MKGIILAGGSGTRLYPLTKATSKQLMPIYDKPMIYYPMSTLMLAGINEILIISTPEDTPR FESLFGDGHDLGIHIEYAVQESPDGLAQAFIIGEEFIGDDSVCLVLGDNIYYGGGLSKML QRAASKESGATVFGYHVNDPERFGVVEFDEEMRALSIEEKPAQPKSNYAVTGLYFYDNEV VEIAKGIKPSERGELEITDVNKVYLEKNKLSVEVMGRGFAWLDTGTHESLLEASTFIETI EKRQNLKVACLEEIAYRMGYITKEQLVELAQPLKKNGYGQYLLRLAAE >gi|237663584|gb|GG668934.1| GENE 90 100114 - 100827 731 237 aa, chain - ## HITS:1 COG:DRA0037 KEGG:ns NR:ns ## COG: DRA0037 COG0463 # Protein_GI_number: 15807707 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Deinococcus radiodurans # 4 206 10 222 328 116 31.0 5e-26 MISVCIATYNGEKYLAEQLDSILLQVSEEDELIISDDGSTDHTLEILRTYAANYPQIQLL QGPGQGVIANFAFALTHTKGEVIFLADQDDVWLPNKVTTVTEYFETHPDIQVVISDLKIV DADLQVTNPSYFKFRKVKPGFWRNAIKSGYIGAGMAFRQEMKNVILPIPPEVPMHDMWIG LLAARKKQTGLIKEPLVLYRRHGANVSPIITKTSFQQKLNWRVNLLKALHQRLKEQR >gi|237663584|gb|GG668934.1| GENE 91 100831 - 101658 733 275 aa, chain - ## HITS:1 COG:no KEGG:EF2196 NR:ns ## KEGG: EF2196 # Name: not_defined # Def: glycosyl transferase, group 2 family protein # Organism: E.faecalis # Pathway: not_defined # 1 275 1 275 275 538 100.0 1e-152 MSQRLEVVIVLYQMKMADTPNYLLLKEVVDHPELHLFIYDNSPLPQEDALFLQQNVTYRH NPDNPGLATAYNEAIAFSQTNQCELLLLLDQDTEVPASYFDTLIIMPLDPTVAVYVPIVE ANGQQISPVYSDQYVGLKGAKPTAGIANQPLMAINSGTVITAETLRWLEGFSEEFPLDYL DHWFFYQLNQANKKIEVLPIHLKQELSVLDYRTMSPQRYRSIIEAETLFYRRYDQEKFSH HRRHLFLRSSKQFLTVKNRQIWRQTLAEFLKLMKG >gi|237663584|gb|GG668934.1| GENE 92 101658 - 102440 668 260 aa, chain - ## HITS:1 COG:RSc0688 KEGG:ns NR:ns ## COG: RSc0688 COG1216 # Protein_GI_number: 17545407 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Ralstonia solanacearum # 5 257 4 251 275 107 29.0 2e-23 MQEMVTISIVTYNSRYIFNVLDQLKAELGTDSIYDIHIYDNHSETAYLEKLTTYEPFITI HRAEENQGFGHGHNQVLFNASTKYAIIFNPDVLVTKDVLDRLLNRIKIDKNIAVVSPKVL NEDGTTQYLVRQKLDVFDYMLRFIPFQFVKKIFDKRLSIYECRDLSDTETTDIKMGSGCF MLIDREKFVEIGGFDERFFMYFEDNDLCLRFGKAGYRILYTPFETVVHMYEKGAHKSRKL FKIFMQSMGKFFNKWGWRFF >gi|237663584|gb|GG668934.1| GENE 93 102567 - 103703 917 378 aa, chain - ## HITS:1 COG:L35751 KEGG:ns NR:ns ## COG: L35751 COG0472 # Protein_GI_number: 15673776 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Lactococcus lactis # 4 365 10 397 443 379 53.0 1e-105 MSLFIYEVLIRLFMTFILSLLLTPLVKLLAFRIGAYDAPGERRINTKNMPTAGGLAIYIA FASSCLLIFRSIIPQDYIWPIILAGGMVVLTGLIDDIKEITPMKKTIGILLAALVIYFVA GIRIDFVTLPVVGMIDLRWFSLPLTLLWILAITNAVNLIDGLDGLASGVSIIGLTTIGIT GYFFLHAKTVYIPIVIFILVASIAGFFPYNFYPAKIFLGDTGALFLGFMIAVMSLQGLKN ATFITVITPMVILGVPITDTVYAIIRRLLNKKPISSADKMHLHHRLLSLGFTHKGAVMTI YALALVFSFVSLLFSYSSTVASILLIVFCLIGLELFIELIGLVGEGHQPLMYLLRILGNR EYRQEQMKKRLGKHSKRK >gi|237663584|gb|GG668934.1| GENE 94 103684 - 103854 71 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNNACLDGLKRKNKWISLKKSKPLPEHMFQLVNASVYGIIYPEREESGFDYVTIYL >gi|237663584|gb|GG668934.1| GENE 95 103814 - 104722 875 302 aa, chain - ## HITS:1 COG:lin1818 KEGG:ns NR:ns ## COG: lin1818 COG1295 # Protein_GI_number: 16800885 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 9 275 10 276 289 176 35.0 6e-44 MKFLDNIKKNQSLMRFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRI DPNSVLPYIAEAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMN KAFGVEQRKNFILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTF QALKWPLTTVVLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSS RIASYQIIGSFIILMLWLNFAATIIILGAIVNAVVDEYLSGDKEKKQPSFEQRLFRWFKK KK >gi|237663584|gb|GG668934.1| GENE 96 104738 - 105502 886 254 aa, chain - ## HITS:1 COG:lin1821 KEGG:ns NR:ns ## COG: lin1821 COG0024 # Protein_GI_number: 16800888 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Listeria innocua # 1 250 1 250 252 360 67.0 1e-99 MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQIGY EGYKYATCCSINDEICHGFPRKKVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEID RLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYGVVRDFVGHGIGPTIHESPMI PHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLSCQYEHSLAITKE GPRILTSQGEELTY >gi|237663584|gb|GG668934.1| GENE 97 105677 - 106120 656 147 aa, chain + ## HITS:1 COG:SPy0721 KEGG:ns NR:ns ## COG: SPy0721 COG0716 # Protein_GI_number: 15674777 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Streptococcus pyogenes M1 GAS # 1 145 1 145 149 173 73.0 1e-43 MTLAKIVYASMTGNTEEIADIVAEAFEDLELEVEIDECTQVDAADFEEADICVVATYTYG DGDLPDEIVDFYEDLQEIDLSGKIFGVCGSGDTFYDDFCKSVDDFEAVFTQIGAKKGADS VKVDLAAEEDDIQRLEEFAKKLATAAE >gi|237663584|gb|GG668934.1| GENE 98 106196 - 106669 457 157 aa, chain - ## HITS:1 COG:CAC0262 KEGG:ns NR:ns ## COG: CAC0262 COG3476 # Protein_GI_number: 15893554 # Func_class: T Signal transduction mechanisms # Function: Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) # Organism: Clostridium acetobutylicum # 3 157 10 165 170 81 35.0 5e-16 MNRVKDKRLWLSIVGITGLGLLSGLFSVNAREYYQALRLPSFAPPGWLFGPVWLVLYIFM GITFYFILVHPNKQQKKRMITLFILQFIANFFWTFFFFSLQNNLLSVIDISLLWLLLIIQ QWDYLRYKLITRGWLMIPYILWVTFAAALNYSILFLN >gi|237663584|gb|GG668934.1| GENE 99 106827 - 107399 725 190 aa, chain - ## HITS:1 COG:FN1004 KEGG:ns NR:ns ## COG: FN1004 COG1309 # Protein_GI_number: 19704339 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 175 1 174 188 69 27.0 3e-12 MARKKTITKEQILTAAYEVVATEGFSKFTARNIANKMKCSTQPIYLEFKNMDDLRDALFQ KIHKYLAKEVFPVKHTGNTIVDLALNYIHFATSESKLYRALYLEEYGGGKKMQEFSYHYF TEAVKADPEYANLNDVQIDSLHMGTWVVATGVAALMTSGIIHPSEEQIIHLMKDSIEAIL ERDEPIDIDL >gi|237663584|gb|GG668934.1| GENE 100 107650 - 108888 1633 412 aa, chain + ## HITS:1 COG:SP0278 KEGG:ns NR:ns ## COG: SP0278 COG2309 # Protein_GI_number: 15900212 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Streptococcus pneumoniae TIGR4 # 1 412 1 412 413 515 62.0 1e-146 MTLENFNENLKKYARLIAETGVNVQDNHTVVLQISVDQAPLARLITEEAYRLGAAEVIVQ WSDETIQREFLAHAATDRIENVPQYKIDQTDDWIAKGASRISVVSSNPDALAGVDAQRVA AFQAANGKALVNLRKATQANKVSWTVVAAASEGWAAKVFPELATSEEQVDALWNEIFKTT RIYEENPVIAWDIHDKKLQEKAAELNEQQFTALHYTAPGTDLTIGLPKNHLWEGAGSYNA RGEEFMANMPTEEVFTAPDSRRVDGYVSSTKPLSYAGTIISGMKFTFKDGKVVDFSAEQG EEALKNLLAIDEGAKHLGEVALVPDPSPISQSGLIFYNTLFDENASNHLAFGSAYAFNLQ GGTEMSEEELAEAGLNRSQTHVDFMVGSDKMNIDGIKEDGTIVPVFRNGDWA >gi|237663584|gb|GG668934.1| GENE 101 109148 - 109528 514 126 aa, chain + ## HITS:1 COG:no KEGG:EF2205 NR:ns ## KEGG: EF2205 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 126 1 126 126 233 100.0 2e-60 MGLFDGLLGNATQNNNETAEKELRDVLIPNEKVDMAFTLVRDLIVFTDKRLILVDKQGIT GKKVDYKSIPYKSISRFSVETSGHFDLDAELKIWISSTELPSVSLQFRKDKDIVAIQQAL AAAVLS >gi|237663584|gb|GG668934.1| GENE 102 109746 - 110267 527 173 aa, chain - ## HITS:1 COG:lin2867 KEGG:ns NR:ns ## COG: lin2867 COG0590 # Protein_GI_number: 16801927 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Listeria innocua # 12 164 2 154 154 193 62.0 1e-49 MGKKETTLTQEEKEFFMREAIAEAKKAEGLAEVPIGAVIVRQGEIIGRGHNLREARQEAT AHAEMYAIQEACRGIENWRLEETQLFVTLEPCPMCSGAMLLARIPEVYYGATDPKAGTAG TLMNLLEDERFNHVAYVEAGVLEEECRLLLVQFFKKLRAKKKEEKLLKNQKKD >gi|237663584|gb|GG668934.1| GENE 103 110345 - 111196 789 283 aa, chain + ## HITS:1 COG:lin2875 KEGG:ns NR:ns ## COG: lin2875 COG2508 # Protein_GI_number: 16801935 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Listeria innocua # 1 279 1 282 293 130 35.0 3e-30 MIIENLSQLYPKGYLSKTIGSEATYSIPVDDQFFIVNKAFLSIKEQHLLEALFPISENPT ITGNHPWFSYLFQQAKLPAEGTFRMLQIQTNVTKELQAEWQFNLTKMFPDTVDCFSPSNN MYILVEEQSKNTFQQEEIQGIFLTLDTDFDCTSAVFVGNFYSSEDILRRCFHEEQRIFSE ELNSSSRTTVFSLTDVALHYFTKEAMSQNVLVEYYRRLLNKDTDIQPIISALWKNQGNIS STAKDLFMHRNTLHYRLEKFFEQTGLSLKKMDDLIFCYLLLRK >gi|237663584|gb|GG668934.1| GENE 104 111253 - 112098 658 281 aa, chain + ## HITS:1 COG:lin0782 KEGG:ns NR:ns ## COG: lin0782 COG0384 # Protein_GI_number: 16799856 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Listeria innocua # 1 279 1 279 282 360 63.0 2e-99 MKITAYVASAFSKNHEGGNKAGVVFMTQPLTRTQKMAIAKELGFAETAFISDSKIADFRL EYFTPKEEVDLCGHATIGAFTIMKHLNKLLQTAYTIETNSGLLAITANGEQLFMEQTVPT FYDTLTLEELSGCFDLNAVATAFPIQIVSTGLKDILVPIKNAQLLQDLQPNFEKIKLLSQ KYGVIGMHLFALSEENIICRNFAPLYDIDEEAATGTSNGALACYLHHHQILQKTNYTFAQ GYTLNAPSEVLVRLNTTSQKTIDQVLVGGRGYYVETKELFL >gi|237663584|gb|GG668934.1| GENE 105 112125 - 112463 550 112 aa, chain - ## HITS:1 COG:no KEGG:EF2209 NR:ns ## KEGG: EF2209 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 112 1 112 112 132 100.0 5e-30 MKASTKIGIGLSIAAVASVSVAVIASEKIIKKVSHVSNRYKVKKFVDDKFDGNQKLLSIV DDLSDDELDSVLNVVDRVKDGGSKLAEYGEKVKDNTDSLKERFFTFIEDAMK >gi|237663584|gb|GG668934.1| GENE 106 112547 - 113251 782 234 aa, chain - ## HITS:1 COG:TM1511 KEGG:ns NR:ns ## COG: TM1511 COG2738 # Protein_GI_number: 15644259 # Func_class: R General function prediction only # Function: Predicted Zn-dependent protease # Organism: Thermotoga maritima # 5 228 2 224 230 175 44.0 5e-44 MMPFYFGIDPTYILVIIGIAISGAASAYVNSTFRKYDQVRSSKHVTGTQAAQYILQKEQI NDVGVQQIAGDLTDNYNSGNKMLSLSEATAQSTSVAAIGVAAHECGHAVQDHTNYVPLRL RAAIVPVANIGSTISFPLILLGVLFSWNQTLINIGILAFSLALIFQLVTLPVEFNASRRA LSILSEGGLLTEEEVPMARKVLFAAALTYVAAALSTFLQLLRLVILFGGNNRRD >gi|237663584|gb|GG668934.1| GENE 107 113450 - 113746 341 98 aa, chain + ## HITS:1 COG:L106083 KEGG:ns NR:ns ## COG: L106083 COG5294 # Protein_GI_number: 15673459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 1 98 1 97 115 63 41.0 6e-11 MKTLLKILIPIVILAGGSWGVYNYYYGGEAYYTQITTSGEKKDEKTNSGEAMTIYYYQQP AFNKNGEEKTVELNESRDQPLRMKAYLKLKVNPRKGAS >gi|237663584|gb|GG668934.1| GENE 108 113911 - 114867 1166 318 aa, chain - ## HITS:1 COG:no KEGG:EF2212 NR:ns ## KEGG: EF2212 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 315 1 315 334 548 100.0 1e-154 MDIYLKKAILHIIDRETGTPVFSEKELDLTTEYIRTYLTAKISKLSTAQTKTGTLAENSS FVDTLRGIPSDFIKKSQEVTQHWYDVYSGSEDAPSADILFILYELDTVLHVAMIKLNYKE SYTHYVDYEEESVYNKLIINRAILSSKSQKPDEGITVDLDTLAFELLEKRYEFSGEKIWY FSEKVIETQAAPSMEENIKEIKKAVKRIGKKFNEDEFELMASVKEAVYDSIEETGTIDNE QIAEQVFKENVSAKLAYQEEVNESKFVDKTPPVRESREISEKKFGKQKLKMDNGIELIVP LDVYRNGDLIEFVNNLAS >gi|237663584|gb|GG668934.1| GENE 109 114995 - 116461 1786 488 aa, chain - ## HITS:1 COG:lin1223_2 KEGG:ns NR:ns ## COG: lin1223_2 COG1263 # Protein_GI_number: 16800292 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Listeria innocua # 92 474 1 383 403 535 74.0 1e-151 MGKFQSDAQQLLKAVGGKENISAVSHCATRMRFVLKDPKKADVPVIEDIPSVKGTFTNAG QFQVIIGNEVPQFYNDFSAISGLEGVSKEEGKAAAKSNLSPVQRVVSVLAEIFTPLIPAL VIGGLILGFRNILEGVPFGFLDGQTIVEVSQFWNGVNSFLWLIGEAIFHFLPVGITWSIT KKMGTTQILGIVLGITLVSPQLLNAYSVATTKAAEIPFWDFGFAQVNMIGYQAQVIPAML AGFLLAYLEIFFRKVIPQAISMIFVPLFALVPTVLAAHVILGPIGWTIGSWVSDIVNAGL TSTFNWLFGAVFGFMYAPLVITGLHHMSNAIDLQLIADFQSTNLWPMIALSNIAQGSAVL AVIFMHRGNKKEEQVSIPAMISCYLGVTEPAMFGINLKYVYPFVAGMIGSAMAGMFATLM GVRATSIGVGGLPGILSIVPQYYLPFLGAMVIAIIVPMGLTYIFRKKGIFNKVDPVDEAT GMLYSEEG >gi|237663584|gb|GG668934.1| GENE 110 116673 - 117053 575 126 aa, chain + ## HITS:1 COG:CAC0249 KEGG:ns NR:ns ## COG: CAC0249 COG0346 # Protein_GI_number: 15893541 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Clostridium acetobutylicum # 1 126 1 126 126 160 62.0 7e-40 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISD QFPARPSYPEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGL PLELHE >gi|237663584|gb|GG668934.1| GENE 111 117075 - 117557 652 160 aa, chain + ## HITS:1 COG:lin0420 KEGG:ns NR:ns ## COG: lin0420 COG3832 # Protein_GI_number: 16799497 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 12 155 15 156 160 73 34.0 1e-13 MKDTFRLENQTIYFGTERAISASPQTIWRYLTETDKLKQWFPELEIGELGVNGFWRFILP DFEETMPFTDYAEEKYLGVTWDTGIIYFDLKEQAPHQTLLVFSESLPENFTTPRHKDIAG WSIVLNRLKQVVETPDAAPEKIDFPQIENHYLEKLTNLEN >gi|237663584|gb|GG668934.1| GENE 112 117601 - 118713 611 370 aa, chain - ## HITS:1 COG:no KEGG:EF2216 NR:ns ## KEGG: EF2216 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 370 1 370 370 574 100.0 1e-162 MIVIYFFSTKSQQFFAYVWAIFPVIAFFLVSFYTLDFLFSPSYLIMVPVFTIMFKINYKK DYSFVALLKMSIRQFVISFLAFIASSSFSWSIILNSSVTFLIVYLFYSSATPMRYHSYLM MFTFCQLIQVKGNTFLMQSQVVAFLIGLFLLALTLNAWWQTGLRQLTSLKSRGHVRFFKS IQLNMKQQKLAVINFWHDLQQIFFGITSFKQFLESPDERVQRFRLAIRMSFTITLSFILM WSVGGIKIIWIPMNVFLLLHPVKAEMNTRIKTRFWGTLLGCFLSLFVVNWLQLPLTHLIV SSLIGIFVYALKPGTVLQVTMATIFGLCLATISLRGMYAAELRVSFVLLAIFVVCLIDLG LFVYQRILRF >gi|237663584|gb|GG668934.1| GENE 113 118886 - 121027 2125 713 aa, chain + ## HITS:1 COG:L135972 KEGG:ns NR:ns ## COG: L135972 COG3537 # Protein_GI_number: 15673483 # Func_class: G Carbohydrate transport and metabolism # Function: Putative alpha-1,2-mannosidase # Organism: Lactococcus lactis # 1 710 1 715 717 949 64.0 0 MNIQAIDTRHGTANQHSFSNGNCLPYTGVPFGMNFYAPQTTDQKGSWWFHPEDRTFQGYR VTHQPSPWMGDFSHLLMTPVSGSLSELSLFHAQSSYRPEESLFSPVEINLTQLRYQITSQ LIPSMYGGILTIDYQQKDNHLLLTLPGRYQVKQLDDHQVAVKVINYSGCEDPDFSFYFVL HFEQPLTKWFAPSSGEDGKILLSFGNIAQQVVHFSSSFISEKQAQLNLAREISLRSTEML QQGIADWHNYFDRLKVTHENPEHTKTFYHTLYRTFLFPQTFYELDENQQPIHYDTFSQTV RPGVLYTNNGFWDTYKTVYPLFSLIAQEKYEEMLEGFLNSYNETGFLPKWLSPDERGLMP GTLIDAVIADAAVKKIRPDLMPQFLEAMKKGATQQSERENYGRQGTLDYLKYGYVPSTYH ESVNHTLDYAYSDFCISQVAKTLNDSETATFYRQQALNYQQLFNPETGFMQAKDTEGNFR PDFLDIRWGKDYAEGSAWQSSFAVYQDFAGLIKLYGSELAFEKKLIQLCNQAPNFNVEGY GFEIHEMSEMAAIDFGQLAISNQPSFHYPFLFSYIGKPEMAQPLLKQLMQTFDASPTGYP GDEDNGSMSAWYIFNSLGFYPVTPGTGEYVIGMPLVQTAEVKLSNGKQLTIQTSPNKVQQ QFIHEIQLNQEKHTAPYFTHQELLNGGTLDYQLGIVPNPQNTAERPFSLSTEK >gi|237663584|gb|GG668934.1| GENE 114 121068 - 122549 1618 493 aa, chain - ## HITS:1 COG:SPy1587 KEGG:ns NR:ns ## COG: SPy1587 COG4753 # Protein_GI_number: 15675474 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 1 492 1 491 494 360 43.0 2e-99 MYRVMFVDDEYMILEGLKWIIPWQELGFEIVKTARSAQEALAFLETESIDVLLTDITMPE MSGIELIEQAKKKGHQFISLILSGYQEFDYVKKGMALQVQDYLLKPVNKQELLANIQRIK IELDQQKKSHARVRLYLENGLMRWLNDEISEGEYEELMQQFTTIKPGDFTVLLVEAEMSF LETIKELFMKKGQLLFIESWMSTYHQLLLIYKGARQEAFLFIREIEAILAGQGQIFVGES VNEWETVYESYEKVKQLQAIETFYQEFLPNNQKEQMNRSAEDFTFLAFNQALMIGDMQTI QRELDAIFNQLSQQHATPEYVRYVVFLLFSDISRQYPTVLEENYEKIVEEIRASNNLNTL YALMQQVLAEVKNKPKIKKYSESVSQAVERIEQGYLEELNLKTVADELHLNPSYLGQIFK KETKRSFSQYLNQVRTKHAQKLLLYTDDTINEISEKVGFNNTNYFSKMFKKLNGITPKEF REQYQSNYAGVEE >gi|237663584|gb|GG668934.1| GENE 115 122561 - 124273 1532 570 aa, chain - ## HITS:1 COG:SPy1588 KEGG:ns NR:ns ## COG: SPy1588 COG2972 # Protein_GI_number: 15675475 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Streptococcus pyogenes M1 GAS # 1 566 6 568 574 361 36.0 3e-99 MKRIFKKLFKKKYLLNRLVQKYSLLLTSIILLTVAALCVYVTYTINLSIDSQKNNAVSQI DSYVTNKNNAATNMINELAGSASKIENMRKYMELSPPEYFDYTYSQWSEDRVSTHFGNNL STLFSTFPDLEEVIIRLDEFDQVLFANRTATNGKKMDMSSIKKHGFQLMRIISDPYTGQP LGELYTVFSSQELLGNQADLLKKSGINAFIYDSAGNQIFSEKAQFTKEEERQLDKRMHTD SDIQQVFHNRYDITEIESSGRSTILLLTSRRVLFQQLFMNYAAILGIGLLLIVILLVGLN RLFKRYSQQVQLILEATRAIGDGNLKERIDTNQVQEELNDIASAINFMVDSLDQYIHDIY TLEIKQRDAHMRALQSQINPHFLYNTLEYIRMYALSRQQEELADVVYAFSTLLRNNINQE KTTTLAEEISFCEKYVYLYQMRYPDQFAYKFEIEETIADVEIPKFIIQPLVENYFVHGID YQRQDNAIKVHAYREGEKIIVAVVDNGKGITANRLEEIRERLNQTEIDTEQSIGLRNVHE RLQRFFGESYGLTIEGKEGEGTTIRLSFVA >gi|237663584|gb|GG668934.1| GENE 116 124245 - 124880 516 211 aa, chain - ## HITS:1 COG:SPy1589 KEGG:ns NR:ns ## COG: SPy1589 COG5578 # Protein_GI_number: 15675476 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Streptococcus pyogenes M1 GAS # 5 202 3 200 201 118 37.0 7e-27 MESTGIQRLFYLSWTVIKLNLLFVLFSLAGGIIFGVGPALQMMTDFILEEGMNYQAITVK RAFESWKAHFKRSNCYFLLFLFTLGFVFYNIYLAVQFTGIMWLIITFILFFVSLILVIFY IYMLLYEGSYFISTIDLMKLSFISIFLNLGVFFKVLFGVISIVALTWKMKGLLLFASFAL IMMWCAYVTRKNRQFIDGKLEQNEANLQKTV >gi|237663584|gb|GG668934.1| GENE 117 124951 - 126417 1251 488 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900035|ref|NP_344639.1| ABC transporter, substrate-binding protein [Streptococcus pneumoniae TIGR4] # 1 488 1 491 491 486 48 1e-136 MKKWQKGLAVAGAAALAVGLSACGKSSKDAASKGDDSTPTLLMYRVGDKPDNYDQLIDNA NKIIEKKIGAKLKMEFVGWGDWDQKMSTIVASGESYDISLAQNYATNAQKGAYADLTDLA PKYAKEAYDQLPDNYIKGNTINGKLYAFPILGNSYGQQVLTFNKEYVDKYNLDISKVDGS YESATEVLKEFHKKEPNIAAFAIGQTFFATGNYDFPIGNQYPFAVKTTDTGSPKIINQYA DKDMINNLKVLHQWYKDGLIPTDAATSTTPYDLNTNTWFMRQETQGPMDYGDTILTQAAG KPLVSRPLTEPLKTTAQAQMANYVVANTSKNKEKSVELLGLLNSNPELLNGLVYGEEGKQ YEKVGDDRVKLLKDYTPTTHLSAWNTGNNLIIWPEESVTEEMVKERDKSIEEAKDSPILG FTFVNDKVKTEITNVATVMNRYAASLNTGTVDPEETLPKLMDDLKTAGWDKVQKEMQTQL DEYIQSQK >gi|237663584|gb|GG668934.1| GENE 118 126441 - 127364 834 307 aa, chain - ## HITS:1 COG:L128777 KEGG:ns NR:ns ## COG: L128777 COG0395 # Protein_GI_number: 15673478 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Lactococcus lactis # 1 307 1 306 306 411 71.0 1e-115 MKKKKVTSVNVRSFNPTANLIFNIVIAIFAISCVVPFFFVIMISLTSEGSLAANGYRFWP KEFSLEAYRYIFQGAMSQRIIHALGVTVFITVTGTIVNATMTSLYAYVISRSNFPFKKFF TLFALITMLFSPGMVANYLVMTNLLQLKDTIWALILPLALGPFNILVMRTFFKKTVPDSI IESARIDGASEMRIFVSIVLPLAVPGIATISLFAALGYWNDWFNALLYIQKDTLVPLQYL LMKIQNNLEFLSRSTDMGAAAQEGLGVLPSESARMAIVVLSTLPIALTYPFFQKYFVGGL TIGGVKE >gi|237663584|gb|GG668934.1| GENE 119 127376 - 128314 929 312 aa, chain - ## HITS:1 COG:L129753 KEGG:ns NR:ns ## COG: L129753 COG4209 # Protein_GI_number: 15673479 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type polysaccharide transport system, permease component # Organism: Lactococcus lactis # 7 312 4 310 310 414 72.0 1e-115 MKKKNGFFQNVWRYKALILMALPGFIWFIFFFYIPVLANVVAFKDFHISPDGFLASLRES PWVGFENFKFLFASKDAWLITRNTILYNVVFLAFNLFFAIAFAIIMSELRNRRLVKVYHT MSLLPYFLSWMVINYFVYAFLSPDKGILNQWITGNGGTMINWYADPRWWPVIFVFLNVWK SLGYNSIIYYASVMGIDPTYYEAAMVDGANKWQQIKNVTIPQILPMMSVLLILNIGGIFR ADFGLFYIVPRNSGALYNVTSVLDTYIYNGLTATGDVGMTAAAALYQSVVGACLLLIANL VVRRIEPDSALF >gi|237663584|gb|GG668934.1| GENE 120 128871 - 129182 212 103 aa, chain - ## HITS:1 COG:no KEGG:EF2224 NR:ns ## KEGG: EF2224 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 103 1397 1499 1499 173 100.0 3e-42 GETILNKAKVGDGINPPEEPEVPITPEEPAKNKKETNKVVTDQNKPTKNSKNEIAINKKE TSKSSYLPKTGEKVQKIFAYLGVGLILIVLILYVIKRNKEKEE Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:24:34 2011 Seq name: gi|237663583|gb|GG668935.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD14, whole genome shotgun sequence Length of sequence - 18909 bp Number of predicted genes - 26, with homology - 22 Number of transcription units - 14, operones - 6 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 12 - 194 139 ## EF_B0037 hypothetical protein 2 1 Op 2 . + CDS 201 - 467 332 ## EFA0022 hypothetical protein 3 1 Op 3 . + CDS 442 - 504 63 ## + Prom 522 - 581 5.6 4 2 Op 1 . + CDS 629 - 1405 562 ## EFA0021 hypothetical protein 5 2 Op 2 . + CDS 1402 - 2736 835 ## EF_B0033 hypothetical protein + Prom 2791 - 2850 8.8 6 3 Tu 1 . + CDS 2876 - 3352 604 ## COG0629 Single-stranded DNA-binding protein + Term 3415 - 3444 2.1 - Term 3456 - 3492 5.7 7 4 Tu 1 . - CDS 3571 - 3678 81 ## - Prom 3769 - 3828 7.1 + Prom 4199 - 4258 80.4 8 5 Op 1 . + CDS 4288 - 4485 191 ## gi|257080300|ref|ZP_05574661.1| predicted protein + Prom 4488 - 4547 4.3 9 5 Op 2 . + CDS 4627 - 5562 633 ## gi|227518163|ref|ZP_03948212.1| conserved hypothetical protein 10 5 Op 3 . + CDS 5636 - 5779 280 ## 11 5 Op 4 . + CDS 5776 - 6219 456 ## gi|227518165|ref|ZP_03948214.1| conserved hypothetical protein 12 5 Op 5 . + CDS 6209 - 7072 471 ## MPTP_1991 DNA-entry nuclease 13 5 Op 6 . + CDS 7075 - 7206 169 ## gi|257080296|ref|ZP_05574657.1| predicted protein 14 5 Op 7 . + CDS 7217 - 8509 572 ## LACR_0292 hypothetical protein + Term 8605 - 8641 1.2 + Prom 8644 - 8703 80.4 15 6 Tu 1 . + CDS 8891 - 9532 442 ## gi|227518169|ref|ZP_03948218.1| hypothetical protein HMPREF0348_1152 + Term 9538 - 9572 6.2 - Term 9259 - 9305 1.3 16 7 Tu 1 . - CDS 9544 - 9762 82 ## gi|227518170|ref|ZP_03948219.1| hypothetical protein HMPREF0348_1153 - Prom 9804 - 9863 8.4 - Term 10300 - 10339 -0.3 17 8 Tu 1 . - CDS 10421 - 10510 57 ## - Prom 10635 - 10694 6.4 + Prom 10670 - 10729 3.4 18 9 Tu 1 . + CDS 10783 - 11439 357 ## gi|227518171|ref|ZP_03948220.1| conserved hypothetical protein + Prom 11857 - 11916 10.9 19 10 Op 1 . + CDS 11937 - 12200 351 ## EFA0072 PemI family protein 20 10 Op 2 . + CDS 12194 - 12556 284 ## COG2337 Growth inhibitor + Term 12570 - 12624 8.9 - Term 12556 - 12614 17.0 21 11 Op 1 5/0.000 - CDS 12621 - 13583 958 ## COG1609 Transcriptional regulators 22 11 Op 2 . - CDS 13585 - 15024 1066 ## COG1621 Beta-fructosidases (levanase/invertase) - Prom 15056 - 15115 15.4 + Prom 15101 - 15160 8.3 23 12 Tu 1 . + CDS 15215 - 17146 1481 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 17152 - 17207 8.8 - Term 17145 - 17189 5.1 24 13 Op 1 . - CDS 17379 - 17648 187 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system 25 13 Op 2 . - CDS 17638 - 17871 339 ## EFA0065 hypothetical protein - Prom 17896 - 17955 6.5 - Term 17890 - 17938 2.8 26 14 Tu 1 . - CDS 18016 - 18909 504 ## COG1204 Superfamily II helicase Predicted protein(s) >gi|237663583|gb|GG668935.1| GENE 1 12 - 194 139 60 aa, chain + ## HITS:1 COG:no KEGG:EF_B0037 NR:ns ## KEGG: EF_B0037 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 60 1 60 61 77 71.0 3e-13 MNTPHLTFKLEHARKEHQKLSEAIITNDTVTLLLNYGCLKNANDRLYQLEYFLNHKEWKD >gi|237663583|gb|GG668935.1| GENE 2 201 - 467 332 88 aa, chain + ## HITS:1 COG:no KEGG:EFA0022 NR:ns ## KEGG: EFA0022 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 88 1 88 88 162 100.0 4e-39 MRNRIEELKEQARTELNEWGLIIDGCFEGDFETWIGCYARPKDKPTALDPINEEEAKEQA KYAVNGFPQDFTEWYEWEINNGKLKNLL >gi|237663583|gb|GG668935.1| GENE 3 442 - 504 63 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MENLKIYYKKRNLLLTTKDF >gi|237663583|gb|GG668935.1| GENE 4 629 - 1405 562 258 aa, chain + ## HITS:1 COG:no KEGG:EFA0021 NR:ns ## KEGG: EFA0021 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 258 1 251 251 446 96.0 1e-124 MDFQNIQTVKELRYALKQYKQTLATTIFDDTQGYISVAFKKEVIEKDGKNVQFLCFYPNY EVALYPVETLLDYLEKLPEQAIVTIKDHDGNYSSLFLTIDETIDQGNNYQWLVISDKNSY ERFFFTAQESTQEQAFEKMLKELETDHDSTLEVVHNWLCRQTDEALFLGILKEDRTLKGA MTYCIGKAQEQSKDQSSAMVADEVVFSWIKEYFLLEKLPETKAVGKVTTTNKKKPTKKSE TKPERKEVDEQIDLFECV >gi|237663583|gb|GG668935.1| GENE 5 1402 - 2736 835 444 aa, chain + ## HITS:1 COG:no KEGG:EF_B0033 NR:ns ## KEGG: EF_B0033 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 444 3 447 447 706 82.0 0 MNKKTPKPLTPPKAFFNWCTAQIPTYEWQNKKETILASSRKNCPTIKKRLTKYSRLSFPT KFYSFGIILVRAKRIEIQTHSYWQTITDGTETLIYEPSNLERFSNDTHVKAHYENGHWHE GLLANYGYMSSAYTNTVFYSNNWQEKLTTISELKYLKLPTISRQELAHVYKYRNEIEFLQ KIGATTLANEILFDDERNIFGTWHKKVDMRVITKNWLKANKKRLKTTNPTFHMLMLEKTL KERKVARIEGIENYLHYSQIKQLPKEVNLTKFQHWFMRKGERFSYYMDYLHMLEELNTPF TDDVLFPENLQLAHDNATNTLNLLERELEEQQYQERKKQLKALETEIDDLLFLAPHSLQE IVEEGQVLHHCVGSQHYLEQHTKGKTTIVFIRRKEEPDKPYFTLEYREKRVIQVQGKYNR GHVPEEVEEAIEQWQIEIEKAMPS >gi|237663583|gb|GG668935.1| GENE 6 2876 - 3352 604 158 aa, chain + ## HITS:1 COG:SPy1830 KEGG:ns NR:ns ## COG: SPy1830 COG0629 # Protein_GI_number: 15675657 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Streptococcus pyogenes M1 GAS # 7 107 8 108 163 97 49.0 1e-20 MIQLSAVGRLTKGAELRTTTNGKSVANVTLACKRKRPDTNGNVPTTFIQCVLWGKPAQVF AKYTQKGALVGVNGELQTRSYDDQQGVTHYVTELVVEDFEFLESKETVQKREEKQHAVPQ GQSTPTVNEQPAMNQAPTQQNVYQQPSMNGLSEYGYNQ >gi|237663583|gb|GG668935.1| GENE 7 3571 - 3678 81 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSVSESLQLMLAFGGFTLTLITTIVAILNYKDKKK >gi|237663583|gb|GG668935.1| GENE 8 4288 - 4485 191 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257080300|ref|ZP_05574661.1| ## NR: gi|257080300|ref|ZP_05574661.1| predicted protein [Enterococcus faecalis JH1] predicted protein [Enterococcus faecalis AR01/DG] predicted protein [Enterococcus faecalis JH1] predicted protein [Enterococcus faecalis ARO1/DG] # 1 65 1 65 65 89 100.0 7e-17 MNKEQAFQTLDSLVYAMEKLENESIRSEDNEELEQMLALMNRDWHELYTIYGKAWEEYRK NALEK >gi|237663583|gb|GG668935.1| GENE 9 4627 - 5562 633 311 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518163|ref|ZP_03948212.1| ## NR: gi|227518163|ref|ZP_03948212.1| conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] conserved hypothetical protein [Enterococcus faecalis DAPTO 512] conserved hypothetical protein [Enterococcus faecalis DAPTO 516] conserved hypothetical protein [Enterococcus faecalis TX0104] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] conserved hypothetical protein [Enterococcus faecalis DAPTO 512] conserved hypothetical protein [Enterococcus faecalis DAPTO 516] # 1 311 1 311 311 524 100.0 1e-147 MTLTTEVFHDFLCSSQQTFIFQEEKQTKSLVKIMIDPKSTRFFSVFLNPFLQDGESLSFR QNESIGDVIGIYDSVTDTFFSQAEYLIEWHLKGVDITGFKDLHEVIQQLERELAEQTLAE INQHYNYYYTLEGKYLADLSDWKITTLKNEVRKKLLDGQTTFIIDHSFVQYECTDSEILD LLTEKQATQSRLVKKYLEKNARMLSEHLQKLQFQQQYAKELAENKQFQKEKEIIQAVQKK GMKTITVTYQISDKELTFKMRNIIDSSRDYFSSYDITKKKERDAYDTLTREAIDLLKIKQ ISYGRKVLYAE >gi|237663583|gb|GG668935.1| GENE 10 5636 - 5779 280 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSNKELSKKYQESLKQRREKQTKRERALEGTVIAPLTDKNNRKDKNK >gi|237663583|gb|GG668935.1| GENE 11 5776 - 6219 456 147 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518165|ref|ZP_03948214.1| ## NR: gi|227518165|ref|ZP_03948214.1| conserved hypothetical protein [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis DS5] predicted protein [Enterococcus faecalis JH1] predicted protein [Enterococcus faecalis AR01/DG] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] hypothetical protein HMPREF9514_02525 [Enterococcus faecalis TX0855] conserved hypothetical protein [Enterococcus faecalis DAPTO 512] conserved hypothetical protein [Enterococcus faecalis DAPTO 516] unknown [Enterococcus faecalis] conserved hypothetical protein [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis DS5] predicted protein [Enterococcus faecalis JH1] predicted protein [Enterococcus faecalis ARO1/DG] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] hypothetical protein HMPREF9514_02525 [Enterococcus faecalis TX0855] conserved hypothetical protein [Enterococcus faecalis DAPTO 512] conserved hypothetical protein [Enterococcus faecalis DAPTO 516] conserved hypothetical protein [Enterococcus faecalis TX1302] # 1 147 1 147 147 262 100.0 6e-69 MREVTAQQLLTEFSIIEKMAQSDAIKQRFCLDNYLAEDVKSAINELNSLYPAYHFEYQEV FGGFGHDLVVTDIAQKVTYDRIPKTRTYGELFQTLAKVYGIHSSAKFHHKPTDRLTEEEF QETIKFYENFDIDTLFSQDDEDKYDES >gi|237663583|gb|GG668935.1| GENE 12 6209 - 7072 471 287 aa, chain + ## HITS:1 COG:no KEGG:MPTP_1991 NR:ns ## KEGG: MPTP_1991 # Name: not_defined # Def: DNA-entry nuclease # Organism: M.plutonius # Pathway: not_defined # 52 285 36 269 280 309 67.0 7e-83 MKVKRKKQPYWLGSLLSLVIIGFGLLNHLDLSEQLSSFLSNDIFQEVAKSDKKSLTKKPR NVKTKKSTSAPYDQQQYNQLANLDFQSGGKAAIEVNNGQSSLDIATWKENKVIYGDLDSL NRTTFVTAYLDRKNLGRSEGRERQVWQPTGWHQKQIDGDPIVNRGHLLAYTSSFNFDIDG NFKIGENGSQDNPKNLATQTAFSNQKVQTHYEKLVRDAQKLKGNKVIYQIVTVFRGKELM PRGYWLQAIDSAGTLNFNVYEYNVQPNVVFNYEEGTSQIDRTMKVRE >gi|237663583|gb|GG668935.1| GENE 13 7075 - 7206 169 43 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257080296|ref|ZP_05574657.1| ## NR: gi|257080296|ref|ZP_05574657.1| predicted protein [Enterococcus faecalis JH1] predicted protein [Enterococcus faecalis JH1] # 1 43 1 43 477 89 100.0 9e-17 MTKEEKIILIVRNSDFTYEELEKLPMSSIDSIYKAHVLEKNGG >gi|237663583|gb|GG668935.1| GENE 14 7217 - 8509 572 430 aa, chain + ## HITS:1 COG:no KEGG:LACR_0292 NR:ns ## KEGG: LACR_0292 # Name: not_defined # Def: hypothetical protein # Organism: L.lactis_SK11 # Pathway: not_defined # 5 399 4 427 434 139 29.0 2e-31 MINKVEKRDILILSSFVFVVMLIYNFGIKQMEFGDDAFFLKQFTHDFQSNYYEFLKFRYN EWTSRLVIEIALTQAVQHVFLWRVLNAIAMSIVAIVPALLFNSDNSRRGLIIGTGMSLLI PASMINNAGWIATTTNYVWVMAAALLSIWPIMNYIRGKSVNWVSLILSLVFLIYATNQEQ MVVIMLVSLLILAGILFLSKKNILITLPHIAIVIASFVFILTCKGNAARNVQETKQWLPN FSSYSIFDKLQIGYSSTLKALFFEWSPLMLAFVLLILTAGLVKNGTLVKKMISGIPLLTY LICTRFNAIIDQTYDIASGKTYMSLLVLLTGLVFLYVIGIFGASNNTLEFLSVIFLLILG VGSRIMMGFSPTIWVSGSRTYYFTYVLIMMSGVYLISQLPKNNQSRTFKVLCGYFLVLVL LLIMMYTKIL >gi|237663583|gb|GG668935.1| GENE 15 8891 - 9532 442 213 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518169|ref|ZP_03948218.1| ## NR: gi|227518169|ref|ZP_03948218.1| hypothetical protein HMPREF0348_1152 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis AR01/DG] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] hypothetical protein HMPREF9514_02517 [Enterococcus faecalis TX0855] hypothetical protein HMPREF9492_02186 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_03150 [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF0348_1152 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis ARO1/DG] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] hypothetical protein HMPREF9514_02517 [Enterococcus faecalis TX0855] hypothetical protein HMPREF9492_02186 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_03150 [Enterococcus faecalis DAPTO 516] # 1 213 1 213 213 387 100.0 1e-106 MEITFSKKSKFFCLAMSLLMILSLFASAGTSVYASELDNEISKEDKAILDNIDVNSFYSD ANKGLDEFFSKAVSVNPTNGKFIVNENGIKDMFGSGVEYEAILDFIEFFNDDNNFNELGR FEFRNNISTLAQGAIPIQPRAGGALAKCAVDWAKNTFGVGISVAAFKSVLNTYGFARAAA WLAGKVASAAGRNVAAVLTLVYTAMTCAPIEAE >gi|237663583|gb|GG668935.1| GENE 16 9544 - 9762 82 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227518170|ref|ZP_03948219.1| ## NR: gi|227518170|ref|ZP_03948219.1| hypothetical protein HMPREF0348_1153 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis AR01/DG] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] conserved domain protein [Enterococcus faecalis TX0855] conserved domain protein [Enterococcus faecalis DAPTO 512] conserved domain protein [Enterococcus faecalis DAPTO 516] hypothetical protein HMPREF0348_1153 [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis ARO1/DG] conserved hypothetical protein [Enterococcus faecalis R712] conserved hypothetical protein [Enterococcus faecalis S613] conserved domain protein [Enterococcus faecalis TX0855] conserved domain protein [Enterococcus faecalis DAPTO 512] conserved domain protein [Enterococcus faecalis DAPTO 516] conserved domain protein [Enterococcus faecalis TX2137] # 1 72 1 72 72 93 100.0 4e-18 MKNNDNISNTLIVFFDKVVRLWSLFLFLIILIKIFFMSNTAIISKNIFYVTGIISVISAL LLIWQEKRRAKV >gi|237663583|gb|GG668935.1| GENE 17 10421 - 10510 57 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENLVIVLTLISCALSIVESIVGILLAIF >gi|237663583|gb|GG668935.1| GENE 18 10783 - 11439 357 218 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227518171|ref|ZP_03948220.1| ## NR: gi|227518171|ref|ZP_03948220.1| conserved hypothetical protein [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis AR01/DG] IS1216, transposase, IS6 family [Enterococcus faecalis R712] IS1216, transposase, IS6 family [Enterococcus faecalis S613] hypothetical protein HMPREF9514_02515 [Enterococcus faecalis TX0855] hypothetical protein HMPREF9492_02188 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_03152 [Enterococcus faecalis DAPTO 516] conserved hypothetical protein [Enterococcus faecalis TX0104] predicted protein [Enterococcus faecalis ARO1/DG] IS1216, transposase, IS6 family [Enterococcus faecalis R712] IS1216, transposase, IS6 family [Enterococcus faecalis S613] hypothetical protein HMPREF9514_02515 [Enterococcus faecalis TX0855] hypothetical protein HMPREF9492_02188 [Enterococcus faecalis DAPTO 512] hypothetical protein HMPREF9493_03152 [Enterococcus faecalis DAPTO 516] # 1 218 1 218 218 374 100.0 1e-102 MEKINKDQENKIMKDIEFLWTCTTEMNAYFTILRQLQKNTDIFQEQMNLSKAFYHYTYNA LIVATFTEVSKIYDRNSKTNYFTVIEYCQKHIDLLLQIRKEKEKSDNIEENRKVDRKYLE DIFSKLKSDITKLEPAFKNLKTQRDKIYAHNDSRSRDGVETIIENNPISLKDMEELLSCA TISLQFIYALITLIKRNPLPNNIGDLDATLIKLQEKRE >gi|237663583|gb|GG668935.1| GENE 19 11937 - 12200 351 87 aa, chain + ## HITS:1 COG:no KEGG:EFA0072 NR:ns ## KEGG: EFA0072 # Name: not_defined # Def: PemI family protein # Organism: E.faecalis # Pathway: not_defined # 1 87 1 87 87 149 100.0 3e-35 MVMLSIKKWGNSNGLRLPKSVMEYLQIHTEDKVKITQEESNGKKRLIIEAVDSDNDLTIE QLFENYKEEKVHVTIQDLGNAVGNEKW >gi|237663583|gb|GG668935.1| GENE 20 12194 - 12556 284 120 aa, chain + ## HITS:1 COG:BH3721 KEGG:ns NR:ns ## COG: BH3721 COG2337 # Protein_GI_number: 15616283 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Bacillus halodurans # 4 109 3 106 109 68 32.0 4e-12 MVKVPHQGDILLLNTAPRSGHEQTGKRPYIVLSHDIIADYSNVVIVAPISSTKRNYPLYV SINPSYGMKTSGKVLLDQLTTIDYEARQCVFLETAHEKLIDELLLKVRTVFQKVNKTNKF >gi|237663583|gb|GG668935.1| GENE 21 12621 - 13583 958 320 aa, chain - ## HITS:1 COG:SPy1817 KEGG:ns NR:ns ## COG: SPy1817 COG1609 # Protein_GI_number: 15675647 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 320 1 321 321 470 76.0 1e-132 MVAKLTDVAELAGVSPTTVSRVINNKGYLSEKTKKNVHEAMKILGYKPNNLARGLQGKSP QLIGLIFPNISNIFYAELIEYLEIELFNQGYKTIICNSENDPGKEREYLEMLEANQVDGI ISSSHNLGIADYERVQAPIIAFDRNLAPNVPIIASDNFEGGKLAASVLRKNGCQNIIMIT GNDNTDSPTGLRALGFSFQIPEGKVFKVPNSLSTIRREMEIKSIISTNKPDGIFISDDLT AILTMKIVKKLNLNIPEDVKIIGYDGTSFIEQFFSQLTTIKQPIDELAKLIVDVLLKKIK GEKISKDYILPVSLLSGGSI >gi|237663583|gb|GG668935.1| GENE 22 13585 - 15024 1066 479 aa, chain - ## HITS:1 COG:SPy1816 KEGG:ns NR:ns ## COG: SPy1816 COG1621 # Protein_GI_number: 15675646 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Streptococcus pyogenes M1 GAS # 1 479 1 479 479 644 60.0 0 MELSREIRYRAYSEWSKDEITKIKENIKQSPWHASYHIEPKTGLLNDPNGFSFFNGKFTL FYQNWPFGAAHGLKKWVHAESDDLVHFNITGTELLPDTKYDSHGAYSGSAYEVDGKLLLL YTGNVRDKNWRRDSFQLGAWMDRSYTITKCEDVFINKPEDVTDHFRDPQIFDYKGQFYAI VGGQSLEKRGVIKLYKAVGNSVEKWSEVGNLDFCSSGSEYMIECPNLLFVNDTPILIYCP QGLDKSELSYDNIYPNTYKICQSFDERTAKLVGSSKIKNLDYGFDVYATQGFNSPDGRTL IVSWIGLPDVEYPTDKYDYQGAISLVKELSINNGKLYQYPVDAIKTLRTSCEDFTSKIET SNTYELEVTFPANQKSELLLFADDKGNGLSLIVDTKEGKVILDRSKAGIQYAIDFGMTRE CLIDTEETIANIFVDNSIIEIFINKGEKVFTSRVFPEKDQNGIQIKSGKPIGKYFELEY >gi|237663583|gb|GG668935.1| GENE 23 15215 - 17146 1481 643 aa, chain + ## HITS:1 COG:SA2167_2 KEGG:ns NR:ns ## COG: SA2167_2 COG1263 # Protein_GI_number: 15927957 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Staphylococcus aureus N315 # 98 462 2 380 385 311 47.0 4e-84 MDYAKLASDIILAVGKDNLIAAAHCATRLRLVLKDNTKVNQKALDENPNVKGTFKIDGQY QVIIGAGDVNFVYDELIKKTGLSELSTDDLKQIVDKNKKFNPIMALIKLLSEIFVPIIPA LVAGGLLMALRNFLTAAGLFGPKSIEEMYPAIKGISSMIQLMSAAPFMFLPILVGISAAK RFGANQFLGAAIGMIMTTPDLGGATEYWNIFGYHVAQTNYAYQVIPVLASVYLLSILEKY FHKKLPSSIDFTFTPLLSVIITGFLTFTVIGPTMLLLSNGITDAIVWLYNATGFIGMGIF GGTYSLIVMTGLHQSFPAIETQLLSAWTNGIGHGDFIFVVASMANVAQGAATFAIWFLTK NSKTKSLASSAGLSALLGITEPALFGVNLKYRFPFFCALIGSGIAAAITGLLKVVAVSLG SAGFLGFLSINATSIPFYLLCELISFSVTFAITYFYGRTRSSSIFAAEAIAEQTSVDTSE INTNQIANADEPTTVETIVSPLAGEITTLGSVNDPVFSSESIGKGIAIKPNGNTIYSPVD GIVQVVFETGHAYGLKSNTGAEILIHVGIDTVSLNGKGFTKKVGAKQKVKKGEVLGTFDS TVITNSGLDDTTMVIVTNSKDYSEVIPITKNIVTEGAALLTIK >gi|237663583|gb|GG668935.1| GENE 24 17379 - 17648 187 89 aa, chain - ## HITS:1 COG:FN0497 KEGG:ns NR:ns ## COG: FN0497 COG2026 # Protein_GI_number: 19703832 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Fusobacterium nucleatum # 2 89 3 90 90 103 57.0 1e-22 MKYKVVYMPQAQKQLKKMDKNQARIIVAWIRKNLEGTTDPRQHGKGLTGNRSGEWRYRIG NYRILANICDSEIIIQIFSIGHRSTIYKK >gi|237663583|gb|GG668935.1| GENE 25 17638 - 17871 339 77 aa, chain - ## HITS:1 COG:no KEGG:EFA0065 NR:ns ## KEGG: EFA0065 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 77 38 114 114 119 100.0 4e-26 MSQSTITFRIPEDEKELVLEYAKAHNSSLTELYRKAVLDKIEDEIDLKTLRNAIEISKEK KEIGISQEEMENLLNEI >gi|237663583|gb|GG668935.1| GENE 26 18016 - 18909 504 297 aa, chain - ## HITS:1 COG:AGpT100 KEGG:ns NR:ns ## COG: AGpT100 COG1204 # Protein_GI_number: 16119860 # Func_class: R General function prediction only # Function: Superfamily II helicase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 50 294 592 836 836 117 31.0 3e-26 DQDHIVKKDSSFARIERVIVDLWDMDCLDKAIVKINSYLEQNESMNQYEKGWLQQFCARM AYVFKDKVTFEEYQKQAYFNNKNLFRITNSNDEYPQLKVPSDQSKMIVKKYKEFRSPRGI LSNIDEIESLITSTSSANQFEEALKKLGDYLGFISERFDDDGIGPDVLWLINEKKGIIIE AKSRKKEHNAFRKEEHGQLLIAERWFKTKFPDIEALPVSVHQDKIATKASFAEGVKVLTF DNILLIIKETKKLYSQLIDYHLDEKALEVQCQKLLLQFDLLSERFVEKYLDTFETMT Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:26:24 2011 Seq name: gi|237663582|gb|GG668936.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD15, whole genome shotgun sequence Length of sequence - 16995 bp Number of predicted genes - 25, with homology - 25 Number of transcription units - 6, operones - 4 average op.length - 5.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 135 - 899 470 ## COG0582 Integrase - Prom 932 - 991 3.7 2 1 Op 2 . - CDS 1005 - 1616 520 ## EF2042 hypothetical protein - Prom 1697 - 1756 80.3 - Term 1645 - 1712 30.2 3 2 Tu 1 . - CDS 1758 - 2276 254 ## EF2041 hypothetical protein - Prom 2442 - 2501 80.4 4 3 Op 1 . + CDS 3346 - 3546 282 ## EF0311 hypothetical protein 5 3 Op 2 . + CDS 3552 - 3725 215 ## gi|227520143|ref|ZP_03950192.1| hypothetical protein HMPREF0348_3126 6 3 Op 3 . + CDS 3726 - 3920 342 ## EF0314 hypothetical protein + Prom 3934 - 3993 2.3 7 4 Op 1 . + CDS 4015 - 4296 281 ## gi|227520145|ref|ZP_03950194.1| hypothetical protein HMPREF0348_3128 8 4 Op 2 . + CDS 4311 - 4991 685 ## EF0315 hypothetical protein 9 4 Op 3 . + CDS 4996 - 5217 173 ## EF0317 Cro/CI family transcriptional regulator 10 4 Op 4 . + CDS 5204 - 5815 743 ## EF0318 hypothetical protein 11 4 Op 5 . + CDS 5818 - 6990 1188 ## EF0319 hypothetical protein 12 4 Op 6 . + CDS 6996 - 7238 255 ## EF0320 hypothetical protein 13 4 Op 7 . + CDS 7254 - 7583 341 ## EF0321 hypothetical protein 14 4 Op 8 . + CDS 7610 - 8185 753 ## EF0322 hypothetical protein + Term 8197 - 8224 -0.9 15 4 Op 9 . + CDS 8238 - 8462 177 ## EF0323 hypothetical protein 16 4 Op 10 . + CDS 8449 - 8997 570 ## EF0324 hypothetical protein 17 4 Op 11 . + CDS 8994 - 10955 1569 ## EF0325 DNA polymerase, putative 18 4 Op 12 . + CDS 10968 - 11207 223 ## EF0326 hypothetical protein 19 4 Op 13 . + CDS 11226 - 11525 407 ## EF0327 hypothetical protein 20 4 Op 14 . + CDS 11532 - 11711 199 ## gi|227520158|ref|ZP_03950207.1| hypothetical protein HMPREF0348_3141 21 4 Op 15 . + CDS 11730 - 14162 1711 ## COG5545 Predicted P-loop ATPase and inactivated derivatives + Prom 14381 - 14440 6.7 22 5 Op 1 . + CDS 14495 - 14815 246 ## EF0329 hypothetical protein 23 5 Op 2 . + CDS 14822 - 16183 1181 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 24 5 Op 3 . + CDS 16189 - 16602 479 ## EF0331 hypothetical protein + Term 16635 - 16675 7.3 25 6 Tu 1 . + CDS 16691 - 16915 250 ## gi|227520163|ref|ZP_03950212.1| hypothetical protein HMPREF0348_3146 Predicted protein(s) >gi|237663582|gb|GG668936.1| GENE 1 135 - 899 470 254 aa, chain - ## HITS:1 COG:SP1129 KEGG:ns NR:ns ## COG: SP1129 COG0582 # Protein_GI_number: 15900995 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 76 250 69 258 387 63 28.0 5e-10 MAKLNWSKKYKYVFSYSNKKGTFWGYRYPYYNSLKHRKEASKRGFESERAANKALLKIQY DLETQNTSFIENKQLTIDEWIKVWIPYAQDNWSVSTKQNIESAVKFHISPLIGNQKLSSL NKITYKREFIDKLRQENKYTESTIQTWHKIVMRMINAAVHNQIIPSNTLTGFKFDLSNNV RSFSKKELQRFVAVLENEDIQTQVIFLTLLKSGMRKGELMGLRWNDIDLTEKYFDINSTR GDYGENKPKTKTST >gi|237663582|gb|GG668936.1| GENE 2 1005 - 1616 520 203 aa, chain - ## HITS:1 COG:no KEGG:EF2042 NR:ns ## KEGG: EF2042 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 203 1 204 204 330 95.0 2e-89 MFLFGNKEEKKVKKAEEKQIKEYFKNNHDIVIGGIYFNDSDKKIFIPKSISESRKQQVIS YDDLINYTDIFVGGHIKKHHGITRAVLGRFSWPVGALVGAGTGGKEFTSIKQLGVMLHLP NNQTVKYMLITTETKTDSMIGKGLMDRYNELIAKLDQILKTNSSNKDNTVLSSADEIRKF KALLDDGIITKQEFEIKKRELLQ >gi|237663582|gb|GG668936.1| GENE 3 1758 - 2276 254 172 aa, chain - ## HITS:1 COG:no KEGG:EF2041 NR:ns ## KEGG: EF2041 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 169 4 172 216 325 98.0 5e-88 MYLDYDTYFEYHDQTYIIIEKVANYYGIELKELRWKHYKDYMIDVENVDIIPYSFGDVSR KIFSGNIIRFHDKCGISYNSTMVKGRQNFSILHESAHYFFDMNKECKSQSFSDLITGKGY TSEDEPKEIRANIFASLALINNEALKECLRKQMSFRQICEEFEMSAAALLAS >gi|237663582|gb|GG668936.1| GENE 4 3346 - 3546 282 66 aa, chain + ## HITS:1 COG:no KEGG:EF0311 NR:ns ## KEGG: EF0311 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 66 1 66 66 130 98.0 1e-29 MIICYKGEDLKVQETCSTYDNISVVLFKGQKRVYNHRTNEIVGGDERLPEAKAIRNFNGS VMVLGR >gi|237663582|gb|GG668936.1| GENE 5 3552 - 3725 215 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227520143|ref|ZP_03950192.1| ## NR: gi|227520143|ref|ZP_03950192.1| hypothetical protein HMPREF0348_3126 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_3126 [Enterococcus faecalis TX0104] hypothetical protein HMPREF9507_02371 [Enterococcus faecalis TX0309B] # 1 57 4 60 60 102 100.0 9e-21 MKKVYQSRLVLTLFAAFLFGIIARESTSLNILLLICGPVAALLWVHHDEVKYQKEVK >gi|237663582|gb|GG668936.1| GENE 6 3726 - 3920 342 64 aa, chain + ## HITS:1 COG:no KEGG:EF0314 NR:ns ## KEGG: EF0314 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 64 1 64 64 103 100.0 3e-21 MLTANEAFLVREAVREKIETLRDAVRHESAKHPTMQDLRTLKHFQAELERYEVAYQKMLN EVGC >gi|237663582|gb|GG668936.1| GENE 7 4015 - 4296 281 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227520145|ref|ZP_03950194.1| ## NR: gi|227520145|ref|ZP_03950194.1| hypothetical protein HMPREF0348_3128 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_3128 [Enterococcus faecalis TX0104] hypothetical protein HMPREF9507_02369 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9506_01011 [Enterococcus faecalis TX0309A] # 1 93 1 93 93 158 100.0 2e-37 MEKEFVIKIGKLYIKRSYQGNSREYLGFGFTSDVNEAKRFYEDEPVTTVKNERYDRRTVQ VVSSNGLEYANFVAEQLGGQVYEVQTTIKLSKV >gi|237663582|gb|GG668936.1| GENE 8 4311 - 4991 685 226 aa, chain + ## HITS:1 COG:no KEGG:EF0315 NR:ns ## KEGG: EF0315 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 226 1 226 229 248 62.0 1e-64 MKNYYHVKTQEAYDNLMTFLETLGYSWTGGDKPTEIDIFHMLGAETFISVSEEEKRLLYA DTHTFKQIIEIDGVSLIEWTATSPKKSIEVSKEFDEWVQNSKEAHIDYKSWCIWQITKMG WDHWLKDPITDKTLLPSEGFDWTEEVEENKELHTRAILDGYTVKKEPMYEIPLSCLKTTD GEVQYLSYKDKTWFASRKHTWLKQRFTETELREKVPEFYRELAKEV >gi|237663582|gb|GG668936.1| GENE 9 4996 - 5217 173 73 aa, chain + ## HITS:1 COG:no KEGG:EF0317 NR:ns ## KEGG: EF0317 # Name: not_defined # Def: Cro/CI family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 63 1 63 63 112 98.0 6e-24 MLSPYKKIRRKAGMSQEELAKRMLLPVKLIKVYEKRNVDPPLHYHANFKAIFNVTDEDIN RLKTTGGIKNAKN >gi|237663582|gb|GG668936.1| GENE 10 5204 - 5815 743 203 aa, chain + ## HITS:1 COG:no KEGG:EF0318 NR:ns ## KEGG: EF0318 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 203 1 159 159 130 64.0 5e-29 MPKINLAIEADSATEMKEILSQLATGSVVEVTQSLYVPTENIATETMYFEHDASGEFIKV EKGESLEFLEKDCFDPRTKEQYEEFINKEKAAKKEPAKKKKATAKKKEEVSTASTSNTEP SKTGEKVAPTETDSETEEVSATADLHPGATKADVQAAMKKAMANGNRDRIKMCFGRYNAE KLSDLKEEHYGKFITDLETLVGE >gi|237663582|gb|GG668936.1| GENE 11 5818 - 6990 1188 390 aa, chain + ## HITS:1 COG:no KEGG:EF0319 NR:ns ## KEGG: EF0319 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 390 1 390 390 747 99.0 0 MPVGSHALLGASSAHRWLICPPLARLEEKVKDRGSSYAEEGTTAHELAELYLAKRFKLLT ARAVNSRLKFFEQDHPYCDESMKEYVTAYCDLVEERVNQYENATVELEQKVDFSKWVPEG FGTSDVVVLSDKTIEIIDLKYGKGVPVDAYLNPQLMLYALGAVDKYDIIYEFETVRMTII QPRLDNISTFEIEKEELLYWADNYVAPRAVQAWEGTGEWTITDDVVKFSKVRAQLRPRAE RNFQLIDKHELKEAPLLTNEEIAEILERAPEIKKWLEHVETYALQKARDEGEEFPGWKVV AGRSNRKISDNEGLLMVLEAEGFEDEDILKPQELKAIGQLEKVVGKKKFAELAADFIIKP EGKPVLVPESDKRPALNSVENALNDFEGVE >gi|237663582|gb|GG668936.1| GENE 12 6996 - 7238 255 80 aa, chain + ## HITS:1 COG:no KEGG:EF0320 NR:ns ## KEGG: EF0320 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 80 3 82 82 130 100.0 3e-29 MKKIDTQEAIASTLKKGMEKAEHSGINVSEDEFTVIQPFDDLNAVIVTVENSTGNRPVNI KVTDTVVILERQEGTLDVFK >gi|237663582|gb|GG668936.1| GENE 13 7254 - 7583 341 109 aa, chain + ## HITS:1 COG:no KEGG:EF0321 NR:ns ## KEGG: EF0321 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 109 1 109 109 194 100.0 1e-48 MPQKSCKEKPVIFSGKGYYITREDTRNVGLYVFSENKVLFKGYFNTIEAALSSLVTNSLL VDETWTMNLKNYKESILEMKEQIISDIKQYFTEQASNSLDDLEEDELFN >gi|237663582|gb|GG668936.1| GENE 14 7610 - 8185 753 191 aa, chain + ## HITS:1 COG:no KEGG:EF0322 NR:ns ## KEGG: EF0322 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 191 1 191 191 337 100.0 2e-91 MAKVTGTKVITNQVRLSFVHVLEPHAMEEGQEKKYSCMLIIPKDDKETLKAMKEAIKTAY EGAKGDKLKGVKFERLKTTLRDGDEEMDTEERPEFENAMFINVSSKTKPQVVKREDGVLV KTDDPDEVYSGVYAIASINFYAYSTAGNKGVTAGLNNILTLCKGDFLGGRANAESDFGDL EWEDEEDDMFS >gi|237663582|gb|GG668936.1| GENE 15 8238 - 8462 177 74 aa, chain + ## HITS:1 COG:no KEGG:EF0323 NR:ns ## KEGG: EF0323 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 74 1 73 73 75 59.0 6e-13 MSKRPVYLPIELHDVFELLEERKSNMIYFTTAKGSLVQVNEYSLRLSELPNMAFYVKQEY TSVEDQEVGKNETN >gi|237663582|gb|GG668936.1| GENE 16 8449 - 8997 570 182 aa, chain + ## HITS:1 COG:no KEGG:EF0324 NR:ns ## KEGG: EF0324 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 182 1 182 182 287 93.0 2e-76 MKPTKARLRNYVDTLKNSVEKEIREKKTKAIRAHIESEWLKIDPEFKKLRGYFESLKIRQ NVKNELVDLLEENSLEIWSFYRDTDARDFETYKKGFLEKLKYNSIKGLAKVEAVYDQEIR EVRETYNAIVANVERVPAKQGVAYLEELGFNVDVFKEEEAQLPMIAVDKSKLRLPSETAD SK >gi|237663582|gb|GG668936.1| GENE 17 8994 - 10955 1569 653 aa, chain + ## HITS:1 COG:no KEGG:EF0325 NR:ns ## KEGG: EF0325 # Name: not_defined # Def: DNA polymerase, putative # Organism: E.faecalis # Pathway: not_defined # 1 653 1 653 653 1335 98.0 0 MKTLNIDIETYSDEDLTKVGVYKYADSPNFEILLFAYSVDGQPVECEDLTISEIPDEIVA ALTDKNVLKIAFNAQFERVCLSKHLGVPYYLDPAQWHCTMVHANELGLPASLGQCAKYLN IEQQKDTRGTQLINFFSKPCKPTKKNGMRTRNLPEHAPEKWQTFIEYCIQDVNVEMAIAN KLNRFPVPESEWKLYTLDQRINDRGAEIDHELATAAIDIMADLSEAGLNEMKALTGLENP NSLAQLKKWLEEQGTPFEKLGKEVVLKALALGNLPENVAEVLKLRLSLSNSSTKKYLMMD NARCSDNRIHGILQFYGANRTGRWAGRLLQVQNLPRNYLSEIDFARQLVKAKDVEGIELM YENVPDTLKQLIRTGLVAKEGHRFIVSDFSAIEARVIAWYAKQDWVLDVFRTHGKIYEAT AAQMFHLGEVTDYDWKSHEGKDMRQRGKVATLALGYQGGPGALKAMGALENGIEEHELQD IVDRWRTANKRIKNFWHETQKAVIDCLQNGGIKKGPRGLKFYKKAGFLFIQLPSGRKLAY AKAHLKEGDYGPAIFYEGQGDKVAFTEQQTYGGKLVENIVQATARDVLAEAMVRLEKAGY PIVFHVHDEAVAEVPEGEKSIEEMNKIMSIVPDWAEGLPLNAEGFETKYYMKD >gi|237663582|gb|GG668936.1| GENE 18 10968 - 11207 223 79 aa, chain + ## HITS:1 COG:no KEGG:EF0326 NR:ns ## KEGG: EF0326 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 79 1 79 79 128 100.0 6e-29 MALNYVKLELTTGGVFSTGKVFEFSYSDYENFKHRFLKRFGNICSNKKFKDLIKNTNDFE ELEFVFFDSDDWELKITKN >gi|237663582|gb|GG668936.1| GENE 19 11226 - 11525 407 99 aa, chain + ## HITS:1 COG:no KEGG:EF0327 NR:ns ## KEGG: EF0327 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 99 1 99 100 168 97.0 8e-41 MKLKLVDVETNPHEEEVGTCEFCMSVEMVNEPVFVFKKDNGELVRVKAFIWSWGFYDEEN IENIVDFAAYVNEQEFDEEQELDYSWLTNLIYEYKYGKD >gi|237663582|gb|GG668936.1| GENE 20 11532 - 11711 199 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227520158|ref|ZP_03950207.1| ## NR: gi|227520158|ref|ZP_03950207.1| hypothetical protein HMPREF0348_3141 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_3141 [Enterococcus faecalis TX0104] # 1 59 1 59 59 102 100.0 7e-21 MGEVLFILMALALYFLLGYFVGIRKYLKAISASLNYERELPTSDYQKGWLDCLGFILKQ >gi|237663582|gb|GG668936.1| GENE 21 11730 - 14162 1711 810 aa, chain + ## HITS:1 COG:XF2121 KEGG:ns NR:ns ## COG: XF2121 COG5545 # Protein_GI_number: 15838712 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase and inactivated derivatives # Organism: Xylella fastidiosa 9a5c # 375 674 31 334 501 187 37.0 7e-47 MEQPEKNIKLAYDGEIHLAVGASKTEKKWKNRQMSWSDFIQRLKTPTVTQETVEDYKKMP KSKQGEVKDVGAFIGGWLKEGRRKRGNTQQRSLVTLDADSTTLDFWDDVQLLFDHAAAVY TTHSHLVKGPRYRLIIPLSRPVTAEEYEPLARKLAEFFGMDNFDDTTYQAERLMYWPSHS IDGEYFTDNIDLPWVDPDEILSQYEDWRDASFWPESSRGHSIRERQAKKAGDPLEKKGVV GAFCRTYDIVSAIETFLPDIYGSTGREDRWTFLEGSTSGGLVIYDDKFAYSHHGTDPVGD QLVNAFDLVRIHLFGDLDEDVKPTTRIDRYPSFKAMREFAMEDKQVKTLLQSERLSQALE DFDGELDELEENDKDWFTKLDLEIDEYGQIMASAKNLEVIMLNDPNLKKKIFMNSFSNRI EVKDNLPWRKLDRDKMWKDSDDAGLRVYIEKIYGIVNRGKIDDALVQEIERNSYDPVKEY LESLHWDGVPRVETLLIDYLGAEDTSFNRVVTKKFLTAAVGRIFVPGIKFDYMLVTSGPQ GIGKTLLPAKLAGDWFSNSLEGVTGKDSYEALQGVWIMEMGELSATKKADIEATKHFISK QEDIFRVAYGRHKSYFKRRCVFWGTTNDNEFLRDKTGNRRFWPVDVGIQPIKNKVWEMTD ETRNQIWAEAVELWQAGEPLYLTDEQEKLALEAQEMHTETSSMEGEILEYLEIPIMEDWY KRSKQERREYIQGWGTDIQEEGEIVRNRVCVAEVWNELYNGDSKNIHPAKAAEIRQVLSH LYGWEKYKLSRGRLKFGPGYGLQTAFTRCE >gi|237663582|gb|GG668936.1| GENE 22 14495 - 14815 246 106 aa, chain + ## HITS:1 COG:no KEGG:EF0329 NR:ns ## KEGG: EF0329 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 106 1 106 106 189 95.0 4e-47 MQIENDIEKYLIRQIKRTGALCYKFTSPGTRGVPDRIILYQGNVFFVELKRPGGKPRKDQ LKIIEKFKEQLIPVFVIDSKQGVDTLIYAMQSGIARVMPDMPRKKE >gi|237663582|gb|GG668936.1| GENE 23 14822 - 16183 1181 453 aa, chain + ## HITS:1 COG:XF0680 KEGG:ns NR:ns ## COG: XF0680 COG0553 # Protein_GI_number: 15837282 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Xylella fastidiosa 9a5c # 5 445 3 456 472 351 43.0 2e-96 MKATLHPYQEYSKNFILDHPYCALLLDMGLGKTLSSLTAIDELLHTFEIIENVLVIAPLS VAEKTWTDEIEKWDHLQHLTFSKVLGNPKQREEALFKKADVYLINRENVEWLVNYYQRNW PFKTVIIDELSSFKSSSAKRFKALRKVRPKMERVIGLTGTPSPNSLMDLWAQMYLLDQGE RLGKTITQYRNKYFAPAQKNGHIVYSWQLIPGAEEAIYNKISDICVSMKAKDYLQLPPRT ENIIELDLNPTSWKQYKELEREYVLELEETDVVASNAATLSNKLLQLSNGAVYDENGDGR EIHQEKLNALERVIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDGDIEKWNEGKI PLLLAHPQSAGHGLNLQKGGHIIVWFGLTWSLEFYQQANARLDRQGQTQPVIIHHLVTKG TIDEQVIKALQAKEQGQSALMAAVKAKIEEYRR >gi|237663582|gb|GG668936.1| GENE 24 16189 - 16602 479 137 aa, chain + ## HITS:1 COG:no KEGG:EF0331 NR:ns ## KEGG: EF0331 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 137 10 146 146 237 99.0 1e-61 MYEWLVSYQKLEQEIYYLDWELETYKKELERWCDPEDLGRYTLTKDSKASKLEDIIEDLE KRLAWKMNSIYDLRKLVYSFKGLDQKILVAKYIEGLSLKQIAGEFGHSYGYIRNKHNQIL KKIEKSDNDVTIPIDKS >gi|237663582|gb|GG668936.1| GENE 25 16691 - 16915 250 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227520163|ref|ZP_03950212.1| ## NR: gi|227520163|ref|ZP_03950212.1| hypothetical protein HMPREF0348_3146 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_3146 [Enterococcus faecalis TX0104] hypothetical protein HMPREF9507_02351 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9506_00993 [Enterococcus faecalis TX0309A] # 1 74 35 108 108 139 100.0 6e-32 MILQYAMRLNEEGTEKAEHIEDGVNSVTITENEIKVYYEDKRGVKNSTTFLKDCSQIYNM WLLSDTFKTLKRLI Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:27:44 2011 Seq name: gi|237663581|gb|GG668937.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD16, whole genome shotgun sequence Length of sequence - 10511 bp Number of predicted genes - 22, with homology - 18 Number of transcription units - 10, operones - 6 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 216 154 ## EF2037 antirepressor, putative 2 2 Tu 1 . - CDS 242 - 430 127 ## EF2036 hypothetical protein + Prom 330 - 389 7.0 3 3 Op 1 . + CDS 485 - 694 135 ## gi|227517981|ref|ZP_03948030.1| hypothetical protein HMPREF0348_0964 4 3 Op 2 . + CDS 731 - 1069 315 ## EF2034 hypothetical protein 5 3 Op 3 . + CDS 1066 - 1179 201 ## + Prom 1181 - 1240 2.1 6 4 Op 1 . + CDS 1265 - 1582 375 ## EF2032 hypothetical protein 7 4 Op 2 . + CDS 1575 - 2309 720 ## EF2031 hypothetical protein 8 4 Op 3 . + CDS 2314 - 2532 145 ## gi|229549633|ref|ZP_04438358.1| conserved hypothetical protein 9 5 Op 1 . + CDS 2682 - 2954 194 ## MPTP_1437 hypothetical protein 10 5 Op 2 . + CDS 2959 - 3159 217 ## EF2028 hypothetical protein 11 5 Op 3 . + CDS 3159 - 3992 512 ## EF2027 hypothetical protein 12 5 Op 4 . + CDS 3992 - 4192 192 ## EF2128 hypothetical protein 13 5 Op 5 . + CDS 4140 - 4397 181 ## COG4570 Holliday junction resolvase 14 5 Op 6 . + CDS 4457 - 4546 79 ## + Term 4683 - 4721 0.4 + Prom 5148 - 5207 5.3 15 6 Tu 1 . + CDS 5305 - 5376 99 ## + Prom 5419 - 5478 80.4 16 7 Op 1 . + CDS 5653 - 5721 76 ## 17 7 Op 2 . + CDS 5727 - 6017 69 ## EF2023 hypothetical protein + Term 6122 - 6190 23.1 + TRNA 6101 - 6172 55.0 # Trp CCA 0 0 18 8 Op 1 . + CDS 6439 - 7362 745 ## EF2022 hypothetical protein 19 8 Op 2 . + CDS 7387 - 7857 200 ## gi|227517997|ref|ZP_03948046.1| hypothetical protein HMPREF0348_0980 + Term 7916 - 7946 -0.4 + Prom 8707 - 8766 4.6 20 9 Tu 1 . + CDS 8786 - 9598 527 ## EF2020 hypothetical protein + Prom 9678 - 9737 7.9 21 10 Op 1 . + CDS 9782 - 9958 163 ## EF2019 hypothetical protein + Term 9970 - 10014 6.2 22 10 Op 2 . + CDS 10034 - 10495 414 ## EF2018 hypothetical protein Predicted protein(s) >gi|237663581|gb|GG668937.1| GENE 1 1 - 216 154 71 aa, chain + ## HITS:1 COG:no KEGG:EF2037 NR:ns ## KEGG: EF2037 # Name: not_defined # Def: antirepressor, putative # Organism: E.faecalis # Pathway: not_defined # 1 71 170 240 240 145 100.0 5e-34 LAYQDSSIKQSAFSNCYKQLKALFDVASYVDIPKVRYEEAVALIPRWKPNLELQARIDMA NDNGDMFKEIG >gi|237663581|gb|GG668937.1| GENE 2 242 - 430 127 62 aa, chain - ## HITS:1 COG:no KEGG:EF2036 NR:ns ## KEGG: EF2036 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 62 1 62 62 89 100.0 4e-17 MFFVIKKASNKKYYFVIKTEENEVIASSKTYYYKSSVLEIIESIKSDMDQKAIIVDTTFN WG >gi|237663581|gb|GG668937.1| GENE 3 485 - 694 135 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517981|ref|ZP_03948030.1| ## NR: gi|227517981|ref|ZP_03948030.1| hypothetical protein HMPREF0348_0964 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_2574 [Enterococcus faecalis HH22] predicted protein [Enterococcus faecalis D6] hypothetical protein HMPREF9498_02408 [Enterococcus faecalis TX4248] hypothetical protein HMPREF0348_0964 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_2574 [Enterococcus faecalis HH22] predicted protein [Enterococcus faecalis D6] hypothetical protein HMPREF9498_02408 [Enterococcus faecalis TX4248] hypothetical protein HMPREF9494_02281 [Enterococcus faecalis TX2137] hypothetical protein HMPREF9507_02948 [Enterococcus faecalis TX0309B] hypothetical protein HMPREF9506_00574 [Enterococcus faecalis TX0309A] # 1 69 1 69 69 133 100.0 6e-30 MKAIREARLIGALLLMIALGVLLKSHFSVPVLATISVPLFIRWFFNWDEAEYQHFQKRQN KKPQSSAND >gi|237663581|gb|GG668937.1| GENE 4 731 - 1069 315 112 aa, chain + ## HITS:1 COG:no KEGG:EF2034 NR:ns ## KEGG: EF2034 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 112 1 112 112 180 100.0 2e-44 MNDKIQKLIKKLAKECQKEDVALSLAAIDLEGEMAISQVGKGTIVAIAAHSQYTLTKEKL EQSDCDCPKHRLLKEMYGTETETTTKNTHTFVTDDPNDLMDILSKIFRGEFK >gi|237663581|gb|GG668937.1| GENE 5 1066 - 1179 201 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTRKEKLNQAKRLADLWYKQQKSQLYIAQQKEHRGIA >gi|237663581|gb|GG668937.1| GENE 6 1265 - 1582 375 105 aa, chain + ## HITS:1 COG:no KEGG:EF2032 NR:ns ## KEGG: EF2032 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 105 1 105 105 192 100.0 5e-48 MNRREANALDRYLTEPTEKPHKETYEDDPVDTTDYFGNEIADEDGVFEITFAMKCLYTGQ PVLTCKKIATQDTIVDLIEELGEENVYLIEYVSSGKRYKEGLLND >gi|237663581|gb|GG668937.1| GENE 7 1575 - 2309 720 244 aa, chain + ## HITS:1 COG:no KEGG:EF2031 NR:ns ## KEGG: EF2031 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 244 1 244 244 443 100.0 1e-123 MTEATKTDFSKLNVYQKLAYVRQKAPYIQKSKRGQQYSYVGSSDVLSALNTVINQVGLIL KPEIVAHQVRESQDEVWKADKVKKEPVAKKRTTYFTELELMMTWINIHNPSEIVACSWYS QGVDIEGEKGVGKALTYAEKYFLLKFFNIATDDDDPDKYQKEQLKNTTITERQIDMLNAS ISRVAELAGQEFEAVKSLAINDSDLNPKKAFEEYSAYDYGVISKLLAKWINFYESRQKVQ EDKK >gi|237663581|gb|GG668937.1| GENE 8 2314 - 2532 145 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|229549633|ref|ZP_04438358.1| ## NR: gi|229549633|ref|ZP_04438358.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200] predicted protein [Enterococcus faecalis T1] conserved hypothetical protein [Enterococcus faecalis ATCC 29200] predicted protein [Enterococcus faecalis T1] # 1 70 1 70 213 136 100.0 6e-31 MIGKIIKHKGNKLAIEFEDEINSNFLKLLANNDDNLVKVELLDNRQMSQKQNALSHVLIA DIARWSYDEPNG >gi|237663581|gb|GG668937.1| GENE 9 2682 - 2954 194 90 aa, chain + ## HITS:1 COG:no KEGG:MPTP_1437 NR:ns ## KEGG: MPTP_1437 # Name: not_defined # Def: hypothetical protein # Organism: M.plutonius # Pathway: not_defined # 7 90 144 228 228 85 47.0 8e-16 MLENNKWFYYCLKYRKCCICGKHADVCHIEVVGMGRNRQKINHETFTFYAGCRQHHQEEH QIGTKNFLNKYQIKPVKLNVEERKKLNIGG >gi|237663581|gb|GG668937.1| GENE 10 2959 - 3159 217 66 aa, chain + ## HITS:1 COG:no KEGG:EF2028 NR:ns ## KEGG: EF2028 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 66 1 66 66 110 100.0 2e-23 MVEELLEKYRQLTSSQKLFFELLAFVYIGSRNGKGIAIEAQTIKKVVNGEIKHKYVYTVV VDEEDN >gi|237663581|gb|GG668937.1| GENE 11 3159 - 3992 512 277 aa, chain + ## HITS:1 COG:no KEGG:EF2027 NR:ns ## KEGG: EF2027 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 277 1 285 285 439 97.0 1e-122 MNEHRGYYAIIPAIVRYDNHLNGNAKLLYGELTALANEKGYCWATNQYFANLYNVSKRTI ISWLKQLEERNYIKIQIFYKPNSKMVDRRHIYILPYPTDTEFYTPSEENFITYGKNHQEG DEENFTENNTLINNTKNNTKNIYSVEQSSTMSELFEKVWKTYPKKTNKKKAKEQFLKKIK SDEDFERFKTGYKAYLKYIKLNDWYHPQELFRWIRDERFNDEYDLSETATQVRYSNNPVR QEKLPDWVNEPKKEEEKLSPEKQAELDRQIKEYLEGK >gi|237663581|gb|GG668937.1| GENE 12 3992 - 4192 192 66 aa, chain + ## HITS:1 COG:no KEGG:EF2128 NR:ns ## KEGG: EF2128 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 64 1 71 141 76 57.0 4e-13 MRIILPIERKLQSRPRFARRGNYVQTYEDSAMGAYKQKAKPELIEKGAIFAHITFYIATP KISIKF >gi|237663581|gb|GG668937.1| GENE 13 4140 - 4397 181 85 aa, chain + ## HITS:1 COG:lin1248 KEGG:ns NR:ns ## COG: lin1248 COG4570 # Protein_GI_number: 16800317 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Listeria innocua # 1 85 59 140 145 58 36.0 3e-09 MRILRFTSLPLKYLLSSKKKRLEVKLERKYCDKKPDLDNYFKAVTDAAEGILYKNDGQIA VMVCQKLYSMRPRTELEITSLEEQV >gi|237663581|gb|GG668937.1| GENE 14 4457 - 4546 79 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLKFKEFNIQLFDVHIYIKRLSSFKTNKK >gi|237663581|gb|GG668937.1| GENE 15 5305 - 5376 99 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILLLKEVDFRQTKANARNVLKS >gi|237663581|gb|GG668937.1| GENE 16 5653 - 5721 76 22 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSEALIEFAEAYRNGKIIAYK >gi|237663581|gb|GG668937.1| GENE 17 5727 - 6017 69 96 aa, chain + ## HITS:1 COG:no KEGG:EF2023 NR:ns ## KEGG: EF2023 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 96 1 96 96 177 100.0 8e-44 MAVFWRKVGGFYQYLDVIMVVSKDKETRVRHALPILAPFRLSLEATYKKIKNKDVESPVL SVSFSLGSKYCNKLGMKLTRRRTLKAIVKIALCSLQ >gi|237663581|gb|GG668937.1| GENE 18 6439 - 7362 745 307 aa, chain + ## HITS:1 COG:no KEGG:EF2022 NR:ns ## KEGG: EF2022 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 307 1 307 307 574 100.0 1e-162 MVNKKRQVRFEFFQVNGKAQEGEKIVKGLFDLYPLADRINSISNYTDRDVILFGEKVRMD RFFEVSSSPELYAMHFTRLRNDKPAYVELNNEVLKEIPLNPGEYIAEDISCLYDRELSVL MVQRNIHSLSPSGIEDYFTEMSDDLVEIELLPVVNKEIISKALANEKFRKLELRAGSMNT TSDRSGLRKVLGPFMELFEKFEGTNFVIEISSGRSKKDLSEDQMKEVITAIEQDKSLFSS AIVSAKKSKEVPVEKYDLINGKLYVYRSFDLPDGAFLKSDSVIDNIKNYYFHPNEGGYRK QIIDAVK >gi|237663581|gb|GG668937.1| GENE 19 7387 - 7857 200 156 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227517997|ref|ZP_03948046.1| ## NR: gi|227517997|ref|ZP_03948046.1| hypothetical protein HMPREF0348_0980 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0348_0980 [Enterococcus faecalis TX0104] conserved domain protein [Enterococcus faecalis TX0309B] conserved domain protein [Enterococcus faecalis TX0309A] # 1 156 1 156 156 237 100.0 2e-61 MNKEHHIFFWIFPFLTGAVFVLICSLTQFSYNDKGFDNLLDSMINFTSIIIGFYSAFYGI LITIKDTSFMKNIRGSAIEKKLKYQLFISLLSAFTTLILSMMLQIFQYKETFASILIFYI WTFFSGLFMALSLQTIILSLEIVFESEPKKKRFINK >gi|237663581|gb|GG668937.1| GENE 20 8786 - 9598 527 270 aa, chain + ## HITS:1 COG:no KEGG:EF2020 NR:ns ## KEGG: EF2020 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 270 1 270 270 407 100.0 1e-112 MLEALFWDHNGDFQSATAAAAVALIGAIISAVFSWLSYKNSVKTAERQYIMEQKKIDANL KAKARIEWIIGVRDKTSELVSLLLSLQKEKTVFYEQWLEIEKVSELLKLYFNSKMNKKVN SEIYIEQNKIIISETATSIVLKENNNINKHAYIKKYIECLVELYKDDNYKNISNKIRFYH DSINKLYEDNFEYWMSHEQSELEKIKNTPPEKLEGEDYDYVAAEKNIEHYQRKIKDIEVS LTNYHKAIDFFTTVISLYLKIEWDKAKEGQ >gi|237663581|gb|GG668937.1| GENE 21 9782 - 9958 163 58 aa, chain + ## HITS:1 COG:no KEGG:EF2019 NR:ns ## KEGG: EF2019 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 58 7 64 64 95 100.0 7e-19 MSRAFEDEQDKQARMEAARKYYNGEQKCDNCGHLFYPNENDPEQFVCDKCIEHAMNRD >gi|237663581|gb|GG668937.1| GENE 22 10034 - 10495 414 153 aa, chain + ## HITS:1 COG:no KEGG:EF2018 NR:ns ## KEGG: EF2018 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 153 1 153 153 266 100.0 3e-70 MAKYTEWISEEGLIKIGGWAKDGLTDEQIAQNIGISRSTLNEWKKRFPDIKDTIKRGKEV VDRQVENALFKSAVGYEYTEITKELTDSGMKVTKRVTKQVAPNPTSAIFWLKNRKPDEWR DKKETQVSGEMSVNNPFAGLSEKELRKLAESDE Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:29:13 2011 Seq name: gi|237663580|gb|GG668938.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD17, whole genome shotgun sequence Length of sequence - 59138 bp Number of predicted genes - 51, with homology - 50 Number of transcription units - 24, operones - 12 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 316 368 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 2 1 Op 2 . + CDS 327 - 1097 663 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 3 1 Op 3 . + CDS 1101 - 1844 937 ## EF0839 hypothetical protein 4 1 Op 4 . + CDS 1854 - 2864 881 ## COG0524 Sugar kinases, ribokinase family + Term 2866 - 2929 17.0 + Prom 2873 - 2932 6.9 5 2 Op 1 . + CDS 2958 - 3986 1056 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 6 2 Op 2 . + CDS 3983 - 4429 527 ## COG1671 Uncharacterized protein conserved in bacteria + Prom 4453 - 4512 7.5 7 3 Op 1 6/0.000 + CDS 4570 - 5640 1276 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 8 3 Op 2 2/0.000 + CDS 5719 - 7092 1642 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase + Term 7221 - 7253 1.1 + Prom 7152 - 7211 4.5 9 3 Op 3 . + CDS 7395 - 8942 2125 ## COG0513 Superfamily II DNA and RNA helicases + Term 8949 - 8997 15.1 + Prom 9472 - 9531 9.4 10 4 Op 1 5/0.000 + CDS 9572 - 9925 396 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 11 4 Op 2 . + CDS 9955 - 11070 1250 ## COG0787 Alanine racemase 12 4 Op 3 . + CDS 11086 - 11463 410 ## COG2337 Growth inhibitor + Term 11550 - 11609 13.1 + Prom 11583 - 11642 9.5 13 5 Op 1 . + CDS 11786 - 12481 508 ## EF0851 hypothetical protein 14 5 Op 2 . + CDS 12506 - 13801 1424 ## EF0852 hypothetical protein 15 5 Op 3 . + CDS 13806 - 14108 116 ## EF0853 hypothetical protein + Prom 14110 - 14169 2.8 16 6 Tu 1 . + CDS 14341 - 14916 437 ## COG0681 Signal peptidase I + Term 14920 - 14967 -0.2 17 7 Tu 1 . - CDS 15228 - 16448 851 ## EF0855 hypothetical protein - Prom 16551 - 16610 8.8 + Prom 16490 - 16549 9.0 18 8 Op 1 . + CDS 16622 - 17374 766 ## COG2365 Protein tyrosine/serine phosphatase 19 8 Op 2 . + CDS 17453 - 17683 415 ## EF0857 hypothetical protein 20 8 Op 3 . + CDS 17717 - 20509 2944 ## COG1511 Predicted membrane protein + Term 20514 - 20565 14.0 + Prom 20639 - 20698 11.5 21 9 Op 1 . + CDS 20730 - 21899 1200 ## COG0053 Predicted Co/Zn/Cd cation transporters + Term 21926 - 21975 2.0 + Prom 22027 - 22086 6.7 22 9 Op 2 . + CDS 22197 - 24020 1650 ## COG0531 Amino acid transporters + Term 24029 - 24064 5.1 - Term 24015 - 24050 5.1 23 10 Tu 1 . - CDS 24056 - 24520 292 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 24529 - 24580 6.6 24 11 Op 1 13/0.000 - CDS 24592 - 25254 850 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 25 11 Op 2 13/0.000 - CDS 25258 - 26178 1174 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 26 11 Op 3 24/0.000 - CDS 26181 - 26816 812 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 27 11 Op 4 . - CDS 26820 - 28004 1392 ## COG1125 ABC-type proline/glycine betaine transport systems, ATPase components - Term 28567 - 28613 1.1 28 12 Tu 1 . - CDS 28640 - 29530 999 ## COG0346 Lactoylglutathione lyase and related lyases - Prom 29568 - 29627 9.0 + Prom 29511 - 29570 7.4 29 13 Tu 1 . + CDS 29696 - 30727 1208 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) + Term 30905 - 30946 11.1 - Term 30954 - 31000 10.5 30 14 Tu 1 . - CDS 31072 - 31320 273 ## COG1476 Predicted transcriptional regulators - Prom 31359 - 31418 7.9 + Prom 31903 - 31962 8.4 31 15 Tu 1 . + CDS 32200 - 34845 3178 ## COG0474 Cation transport ATPase + Term 34904 - 34949 17.1 32 16 Tu 1 . - CDS 34890 - 34961 59 ## + Prom 34934 - 34993 8.3 33 17 Tu 1 . + CDS 35179 - 37185 1789 ## COG3158 K+ transporter + Term 37243 - 37296 2.2 - Term 37143 - 37188 1.1 34 18 Tu 1 . - CDS 37255 - 37953 615 ## EF0873 Cro/CI family transcriptional regulator - Prom 38028 - 38087 6.7 + Prom 37955 - 38014 7.4 35 19 Tu 1 . + CDS 38118 - 40223 2153 ## COG2217 Cation transport ATPase + Term 40237 - 40285 9.5 + Prom 40265 - 40324 4.6 36 20 Op 1 . + CDS 40347 - 41771 577 ## EF0876 hypothetical protein 37 20 Op 2 . + CDS 41840 - 42751 1109 ## COG4989 Predicted oxidoreductase + Term 42801 - 42854 11.6 + Prom 42848 - 42907 7.5 38 21 Tu 1 . + CDS 42939 - 44231 1555 ## COG0258 5'-3' exonuclease (including N-terminal domain of PolI) + Prom 44233 - 44292 80.3 39 22 Op 1 4/0.000 + CDS 44438 - 45640 1496 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains + Term 45683 - 45728 4.1 40 22 Op 2 4/0.000 + CDS 45740 - 46582 894 ## COG0266 Formamidopyrimidine-DNA glycosylase 41 22 Op 3 1/0.250 + CDS 46579 - 47178 720 ## COG0237 Dephospho-CoA kinase + Prom 47181 - 47240 7.0 42 23 Op 1 6/0.000 + CDS 47358 - 47840 542 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 43 23 Op 2 8/0.000 + CDS 47856 - 49265 1571 ## COG3611 Replication initiation/membrane attachment protein 44 23 Op 3 . + CDS 49265 - 50194 1100 ## COG1484 DNA replication protein + Term 50196 - 50234 -0.9 + Prom 50232 - 50291 4.8 45 24 Op 1 . + CDS 50420 - 51484 963 ## EF0884 hypothetical protein 46 24 Op 2 . + CDS 51498 - 53018 1131 ## EF0885 hypothetical protein 47 24 Op 3 2/0.000 + CDS 53008 - 54591 1407 ## COG5298 Uncharacterized protein conserved in bacteria 48 24 Op 4 . + CDS 54588 - 55850 1167 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 49 24 Op 5 . + CDS 55865 - 57931 1941 ## EF0888 hypothetical protein 50 24 Op 6 . + CDS 57933 - 58781 943 ## COG2199 FOG: GGDEF domain 51 24 Op 7 . + CDS 58797 - 59108 389 ## EF0890 hypothetical protein Predicted protein(s) >gi|237663580|gb|GG668938.1| GENE 1 2 - 316 368 104 aa, chain + ## HITS:1 COG:STM4446 KEGG:ns NR:ns ## COG: STM4446 COG1921 # Protein_GI_number: 16767692 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Salmonella typhimurium LT2 # 2 85 5 88 372 79 51.0 1e-15 SYEKFHLKEVINASGKMTILGVSKVSEAVLAAQRFGGEHFFEMSELSVQTGAFLANLLKV EDTQIVSSASAGIAQSVAALIGKGSLYHAYHPYTAKMNTRDYFT >gi|237663580|gb|GG668938.1| GENE 2 327 - 1097 663 256 aa, chain + ## HITS:1 COG:STM4446 KEGG:ns NR:ns ## COG: STM4446 COG1921 # Protein_GI_number: 16767692 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Salmonella typhimurium LT2 # 1 256 113 371 372 259 52.0 2e-69 MDYGTPVEVMVAQGGGQVVEAGYANMCSPEHVEMMISEKTAAILYIKSHHTVQKSMLTVA EAAKVAQRHKVPLIVDAAAEEDLFKYTEAGADLVIYSGAKAIEGPSAGLVVGKKEYIDWV RLQGKGIGRAMKIGKDNILGFTQAVEEYLTHGSESGASMQERLKPFVEAINNLSDLTAKI VQDGAGRDIYRASVKVNGRKTAKEVIQALKAESPAIYTREYQANNGIIEFDIRSVNQEEM NKIVQRLQEIMDTKEK >gi|237663580|gb|GG668938.1| GENE 3 1101 - 1844 937 247 aa, chain + ## HITS:1 COG:no KEGG:EF0839 NR:ns ## KEGG: EF0839 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 247 1 247 247 473 100.0 1e-132 MSLKPNYLEERICLNVLANSVENAQACYEAAEGHVVLGVLSKNYETDEAAIDDMKKYQAA TNNALSVGLGAGDPNQSQMVARLSEVLQPQHVNQVFTGVGASRALLRQDETVINGLVSPT GKVGYVNIATGPLSSGAPAAEVPIETAIKLLKDMGGSSIKYFPMKGLAHKEEYQAVAAAC AKYDFYLEPTGGIDLENFEEIVQIAVDAGVKKIIPHVYSSIIDQETGDTRTEDVKTLLTM MKNTLNK >gi|237663580|gb|GG668938.1| GENE 4 1854 - 2864 881 336 aa, chain + ## HITS:1 COG:TM0067 KEGG:ns NR:ns ## COG: TM0067 COG0524 # Protein_GI_number: 15642842 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Thermotoga maritima # 1 323 1 325 339 155 31.0 7e-38 MKIAAFGEVMLRFTPPEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRL GEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD FEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHACQKKVCFDFNYRPSLNTANSALF MRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTT RSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWSLEKAVTF ATVNGVLAHTIQGDIPLTTVKQVNHVLEHPNIDLIR >gi|237663580|gb|GG668938.1| GENE 5 2958 - 3986 1056 342 aa, chain + ## HITS:1 COG:aq_1026 KEGG:ns NR:ns ## COG: aq_1026 COG0187 # Protein_GI_number: 15606321 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Aquifex aeolicus # 16 328 23 368 792 85 23.0 2e-16 MSVAHLLTVLENDEFIERIQKRPEAFIGTTGLVGLENLLVQTINGLLEFFIEKNQGKIAI QLSRQQISFQVSSTRPLVFEQKQVDLEPPFLYLSVLQAFSKQVGISIDQEKQRTIFIYHQ GQLKKRLLLPIEETQERIEVLFWPDTQIFGTESLSYMRVLQQCQQIAMLNPGLKILLTQE EEQKNLCYYPKGLSNYLFEKDNPLTRKAAPIIQAKQTELALVQFILSKNHAPQVQKTFVN GHYPSLGGTHYEGFLDGVVVAFNQFLEEQHYSLSVTADSFLAEFDFVLAITIPKPRYTDA TKTILRNTELYEVVKEVVFDELQHYFQRHPKWLEQGRIEGNE >gi|237663580|gb|GG668938.1| GENE 6 3983 - 4429 527 148 aa, chain + ## HITS:1 COG:SA0636 KEGG:ns NR:ns ## COG: SA0636 COG1671 # Protein_GI_number: 15926358 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 3 146 4 147 152 142 47.0 2e-34 MKIFVDGDGSPVKETVIEVAVEKALDVVIVTSVDHYSLKDYPENVSFVYVDKGADAADFK IVQLIKKGDLLITQDYGLASLVLPKGVLVLHQLGYQYTKENIDGLLEQRYFSGQIRRKGG RTKGPKPFTDKDRTTFKQALIELVERSL >gi|237663580|gb|GG668938.1| GENE 7 4570 - 5640 1276 356 aa, chain + ## HITS:1 COG:SP1671 KEGG:ns NR:ns ## COG: SP1671 COG1181 # Protein_GI_number: 15901506 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Streptococcus pneumoniae TIGR4 # 3 351 5 343 347 387 55.0 1e-107 MKIILLYGGRSEEHDVSVLSAYSVLNAIYYKYYQVQLVFISKDGQWVKGPLLSERPQNKE VLHLTWAQTPEETGEFSGKRISPSEIYEEEAIVFPVLHGPNGEDGTIQGFMETINMPYVG AGVLASANAMDKIMTKYLLQTVGIPQVPFVPVLRSDWKGNPKEVFEKCEGSLIYPVFVKP ANMGSSVGISKAENREELQEALEEAFRYDARAIVEQGIEAREIEVAILGNEDVRTTLPGE VVKDVAFYDYDAKYINNTIEMQIPAHVPEEVAHQAQEYAKKAYIMLDGSGLSRCDFFLTS KNELFLNELNTMPGFTDFSMYPLLWENMGLKYSDLIEELIQLALNRFKQRQEFYNN >gi|237663580|gb|GG668938.1| GENE 8 5719 - 7092 1642 457 aa, chain + ## HITS:1 COG:SPy1420 KEGG:ns NR:ns ## COG: SPy1420 COG0770 # Protein_GI_number: 15675337 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Streptococcus pyogenes M1 GAS # 1 455 1 453 463 426 49.0 1e-119 MKLTFWEVAQAVEASNDWQQWPDFPLTGIEFDSRKIVKGNLFVPLQGENDGHRFIESAMA NGCQAAFWGQDLVDAPQQLPVLHVTDPLVAMQKLATYYLNKMQPNVIAVTGSNGKTTTKD LIAAVLSEKFVTYKTQGNYNNQIGLPYTILHMPDETEKLILEMGMDHAQEISFLSNLAQP EVAAITMIGEAHVENLGSRAGIAQAKMEIVDGLAKDGSLFVPSDEPLLEPLVEKVTQQVI TFGFSQESQLQGIVTNEAKEQTSFKISDTQMTFTIPVPGTYNVTNALIAIGIGRYFQLTD SEIQKGLATAELTKNRTEWLKAANGAEILSDVYNANPTAMGLVLDSFSKMSKVGKRIAVL GDMLELGPDSAAMHQAMAQHLAPDAIEEVFLYGSEMAYLADKLQETYAPANIHSFKKEEK NELIEAVKKVLQPEDMVVLKGSNGMGLREVIDALLEK >gi|237663580|gb|GG668938.1| GENE 9 7395 - 8942 2125 515 aa, chain + ## HITS:1 COG:lin0859 KEGG:ns NR:ns ## COG: lin0859 COG0513 # Protein_GI_number: 16799933 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Listeria innocua # 2 440 3 440 516 592 69.0 1e-169 MKFKELGLAPELLSAVERAGFEEATPIQSETIPLALAGKDVIGQAQTGTGKTAAFGLPML NKIDADNRVIQGLVIAPTRELAIQTQEELFRLGRDKKIRVQAVYGGADIGRQIRGLKDRP HIVVGTPGRLLDHINRRTLKLETVETLVLDEADEMLNMGFLEDIEKIISQVPEQRQTLLF SATMPPAIKNIGVKFMKQPEHVKIKAKEMTADLIDQYYVRSKDFEKFDIMTRLLDVQTPE LTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVLRSFKNGNLDILVATDVAA RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKGGMSVTFVTPNEMGYLHVIENLTKK RMTPLRPPTEKEAFKGQLSAAVETIESDLEENGLDKYLESAEALLEKYSATDLAALLLKT VAKDPADAVPVKITPERPLPSNKKGFNKNGRGGGGGNNRNRNRGGNGKGGSYRGNKNHKD GDRNYKNSDRKNKDQRGGKRHNDKKRGFVIRENAK >gi|237663580|gb|GG668938.1| GENE 10 9572 - 9925 396 117 aa, chain + ## HITS:1 COG:SP1699 KEGG:ns NR:ns ## COG: SP1699 COG0736 # Protein_GI_number: 15901533 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Streptococcus pneumoniae TIGR4 # 1 115 1 115 120 119 51.0 2e-27 MIKGIGIDAVELSRIKPIVEKQGSFIQRVLTPNELTLFEKLSTKRQIEFLAGRFACKEAF SKAWGTGIGKVGLQDIEVLTEKTGAPYVANSPHNGKVFVSITHTDTMAIAQIVLESE >gi|237663580|gb|GG668938.1| GENE 11 9955 - 11070 1250 371 aa, chain + ## HITS:1 COG:lin0885 KEGG:ns NR:ns ## COG: lin0885 COG0787 # Protein_GI_number: 16799958 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Listeria innocua # 1 370 1 366 368 369 48.0 1e-102 MVVGWHRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVETAKAAKKGGA TGFCVALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLT PESNTPLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSY FEKQAGRFKAVLAVLEELPQYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPS YALKPALRLTSELIHVKRLAAGEGIGYGETYVTESEEWIGTVPIGYADGWLRHLQGFTVL VNGKRCEIVGRVCMDQCMIRLAEEVPVGSVVTLVGKDGNEENTLQMVAEKLETIHYEVAC TFSQRIPREYN >gi|237663580|gb|GG668938.1| GENE 12 11086 - 11463 410 125 aa, chain + ## HITS:1 COG:BH0522 KEGG:ns NR:ns ## COG: BH0522 COG2337 # Protein_GI_number: 15613085 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Bacillus halodurans # 1 112 2 113 116 154 69.0 3e-38 MVKRGDIYFADLSPVVGSEQGGVRPVLVVQNNLGNHFSPTIIVAAITAKMAKPKLPTHIG INSDETGIEKDSVILLEQIRTIDKGRLKEKVCHLRLDIMEEVDRALGISVGLSSDSAPAK ANSAT >gi|237663580|gb|GG668938.1| GENE 13 11786 - 12481 508 231 aa, chain + ## HITS:1 COG:no KEGG:EF0851 NR:ns ## KEGG: EF0851 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 231 1 231 231 372 96.0 1e-101 MMIVVLLMSSCLFLFVSYQLYLRLLVEKLDSEDRTLKRKINFYKYQKNSRLMIYLLFSVC LLSVLLLGIVYTYYQLNQRNIRMEQRIERLAQGQATQGDKIKKQAIKKTALNQFPWKQAV STESAAVLTNYELQLAREWRPYFGETSITIIRSEKTQTLTLSVFSVGLSYPEFQTAQDNI LALISALNSVKEITMIDFNFTYRDQEQTLVKSIDTYARETLETNLEPVVIS >gi|237663580|gb|GG668938.1| GENE 14 12506 - 13801 1424 431 aa, chain + ## HITS:1 COG:no KEGG:EF0852 NR:ns ## KEGG: EF0852 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 431 1 431 431 399 98.0 1e-109 MTKRRLIKKIKDISDDTLEKEVFFQPGFEPEKIISGIKPEQQEKEMATLRERLAYYQKKE TAFKKLQEENEQLKNQQETEKQALEEKNQALLETLNQKEHEIFELEEQLETDSETTTEAT TLQTNLQNAEKQLTTVHNQMERLESELTQQVAELEKESAEQQQHIQTLYNQLAEEKGKLE KKGDITGMEKQVETLTTELEESTTTQRALQEQIEKLTVQLQKVEAEKQTLQEAAQQEVIV QQRMEELKNELQNSLQQKNEAEVKLGRLQGVNDKHLAEKQVYEGELAALRKEVESKEDSL EQVQKELKTLQAVSKNIEPSSEQLTELLRAKQQINDLLMKNQQLQEEALKSQQEIGEVMV SAKKEANRIVNEAKVEAKHLINSAELEMLNIGNRAKSISNEVEASKVEVLEIYRELEERL TKLTRLEQDNY >gi|237663580|gb|GG668938.1| GENE 15 13806 - 14108 116 100 aa, chain + ## HITS:1 COG:no KEGG:EF0853 NR:ns ## KEGG: EF0853 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 100 9 108 108 152 96.0 3e-36 MVSKKLMGARKLHCLGVLFLAVTLSGSAERLQAAVVSKEEQSLRQPLIRKNIVTEKSEYL VQANQSIWELAQDAQKPLNQFMKENQLRSSYIKKGTQLVK >gi|237663580|gb|GG668938.1| GENE 16 14341 - 14916 437 191 aa, chain + ## HITS:1 COG:lin1309 KEGG:ns NR:ns ## COG: lin1309 COG0681 # Protein_GI_number: 16800377 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Listeria innocua # 4 178 7 185 189 92 30.0 5e-19 MTAEEIKKKRQAYQKKQRIQVVKFFMPAILFAIFVFFFVLKTSSYPIAGQSMKPTLNAGE RVLVQRTKQVTRYDVIAFKAPLANKGTYVKRIIGVPGDRIWVNEGKLYLSEEPIASDNEA LPENASRFDLSEEAAAQLHLFQKIPAGHYFVLGDNRTHSSDSRTFGFVEIQTIEGIVVFK MAPFKEIGKVK >gi|237663580|gb|GG668938.1| GENE 17 15228 - 16448 851 406 aa, chain - ## HITS:1 COG:no KEGG:EF0855 NR:ns ## KEGG: EF0855 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 406 1 406 492 687 96.0 0 MLKRDFLEKPYDYMNDILLFLYNNKGQATRNELIDFFNISLPTLNEYLSFLEQFLKEERL QESLTVTALGDTLYLNKAPTFSMKSMIMLFLDKSIKFHMVQQLFHKNEINGGYFQQNYAI SSATYYRKIVELNDLLNEFNLRIKRGKLVGEEKQIRFFFFNFFWFIFEEKTDLEKELANQ YLGLIEILQEIPRITFDHTEILQIKLWMKISFRRMVLEPLPTISPQDAQLDRPLFEEINL SIHTYMKRIDRPYTSNEAYMFYDFFCSMHNYSANAAFAFRLAKQQRIEKTYLNEMNRVIL TYLKAHGYLSHYVLPIRLLYIENLLFQLHAQLYYFSGFILPFDYWTIQSLLKVLRHPFSE SEVYELVEIATTNFATEATISKYQNQFTEINYTLILNHIAELNEKK >gi|237663580|gb|GG668938.1| GENE 18 16622 - 17374 766 250 aa, chain + ## HITS:1 COG:lin1914 KEGG:ns NR:ns ## COG: lin1914 COG2365 # Protein_GI_number: 16800980 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Listeria innocua # 1 247 48 296 298 156 32.0 5e-38 MNSVVNFRDIGGFPTKQGTSVKTGHFFRSGELVNVAQEDQQMLVEDYQIKRIYDFRSAAE TQERPDDSIQGTNYLHIDILADIQAQTASLEGMLKTVGSPDAAMDMAYKEMVLSNSGRKG YQTFFENFLSYPQEAILFHCFAGKDRTGIGAALILSALGVEHSYILEDYLKTNEQRKAAN EQIIAQYQANGTSSAEIQQLETMLYVKKEYLATALQAIEKEFGSVEGYLKEGLGLPLSAK KDMLSLYTKS >gi|237663580|gb|GG668938.1| GENE 19 17453 - 17683 415 76 aa, chain + ## HITS:1 COG:no KEGG:EF0857 NR:ns ## KEGG: EF0857 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 76 1 76 76 97 100.0 1e-19 MKEGQEQFLTFILDRTKEDKKEKMQALLAEMFERQQTGKLDKMYLMTKAPKLLAYLKPEA IDEVKQVVSEFSKNMK >gi|237663580|gb|GG668938.1| GENE 20 17717 - 20509 2944 930 aa, chain + ## HITS:1 COG:L118462 KEGG:ns NR:ns ## COG: L118462 COG1511 # Protein_GI_number: 15673652 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 30 930 1 901 901 1281 71.0 0 MCRNIQAFVCYSLVFYAKVIQAQKKAGDFMKHIKNTWELFILDWKRIFKNPVATFLIVAL MIIPSLYAWFNIKALWDPYSNTGELPIAVYSDDQTATFQDKSVNIGDEVLKNLKKNKQLG WRFVDSKKELDKGVQSGKYFAGIYLPKDFSKDLLSFTSGDINKPKIEYSINEKINAIAPK ITSKGASSIQSQISEEFIKTASSTLIKTFNDIGYDIDKNMVSIQKVKSMILDTDANIGTI DTYAKQVTDLHGKMPELKEKLAKANDAMKYLPEVDALGEKIVELNGKMPSIKEQASVILT LQDKIPEIQNAGRQIAMIDEDFASVEQTMSEGIQEAKQGLEIIQQVQTALPDIRKLGDQA NDLGNVTLDGANKLQEALPSITNSVEVTLKSIQQVATTTTSVVATIRQALDDGQLTPEEK QHINEVVQDFTTNIQRQQQAINDIITFMKQLQENAGNHDLDGAIAQLSHVNDLLTDFSNR LNQLNALVQAGDISGVQNYLNEIDAMATNISNIVGSVDVNGISNTVSTILNKLTSTIQNA QGQLNKAQQIDFEGLLSSTSQTVTNAISLLEKYQAEMPAIKQEIHDANTMLNGNMETIVN GINRGADLYKNDLPVIQDKVSKAAAFMQNDYPGIRKDLTNTLKTVNEKMPDVEAALDKAN ELIINDWPNIKTGLHKAANAIRKGEKEVDLGEILKLLKLDANKESDFFTQPVEVKEHAVY PIANNGSASTPFYTALCLWVGAVLFSSVATTDVYLEGKDKKRFSKREQFSARMFTFIVMG IGQALIVTLGNYFALGVDVRNPAYSVWFAVLIAITFMIMVYVLVALFGNVGKGIAIIILV LSISGGGGNYPIQVSGKFFQMINPFLPFTHAVNLLRESAGGIYWPNAWFAIWIMVGISVV FSIGGAILYPHLEHRSKKFAALAQKSHLFH >gi|237663580|gb|GG668938.1| GENE 21 20730 - 21899 1200 389 aa, chain + ## HITS:1 COG:CAC0606 KEGG:ns NR:ns ## COG: CAC0606 COG0053 # Protein_GI_number: 15893895 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Clostridium acetobutylicum # 21 386 32 400 403 275 38.0 8e-74 MIQALLQRYEKKIERRKLEKRTAFGAFAGRIGLVSNLFLFVSKFMIGLLSGSVSIMADAI NSLSDTISSVLTLVGFYIAGKPADKEHPYGHERFEYISGMLVSLVITFIGFEFLTTSVDR ILHPESIKVTPILFAVLALSIGIKIWQGLFYKKVSAKIDSQALVASAKDSFNDVYTTLAV LISAFIEGVTGLRIDGYIGFLIAAYIIYSGLQLIREFINELMGMRPSQTEIDEMKNVLSK METIVGYHDLLIHNYGPSQTFASVHIEIDDRWDLNKAHQTIDAIEAKFKEELDVNLVCHI DPVNLYDPTQQFVHQTIKKIIRSFDASLKVHDIRLVTYGEEPKILFDLVLPTESKLSEFE LGVEIQRQVYEKIGRYKVEITFDHTYLLQ >gi|237663580|gb|GG668938.1| GENE 22 22197 - 24020 1650 607 aa, chain + ## HITS:1 COG:lin2235 KEGG:ns NR:ns ## COG: lin2235 COG0531 # Protein_GI_number: 16801300 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Listeria innocua # 4 607 5 607 607 700 59.0 0 MADLKRLFIGKPLKSAENDEHKLSRFAALALLSSDALSSIAYGTEQIVVVLVTLSAAAIW YSLPIAAFVIILLISLTLSYRQIIHAYPHGGGAYVVSSENLGRNAGLLAGGSLLVDYMLT VAVSVSAGAEAIISAIPALYGHQVAISIGIVILITLMNLRGLRESASFLMLPVYSFIAII TLLIVVGLFKIVTGAQPLNATALPGAVVPGISIALVLRAFSSGSSSLTGVEAISNAVPFF KKPRAKNAAGTLALMATILGFFFVGITFINYWYGIVPKEEVTVLSQIGKAVFGQNILYYL LQFATALILAVAANTGFSAFPVLAYNLAKDKFMPHMYMDRGDRLGYSNGILTLAAGSIVL LLIFQGSTERLIPLYSIGVFIPFALSQSGMVVKWRKETKNWLPKSIANIVGAFISFAIIA ILFIYRLGDIWPFFIIMPVLIYAFYRVNTHYKNVAEQLRLEDGAQLHEFDGNTVIVLVGN VTKANVGALNYARSIGDYVVAMHVSMDENVEKEKEIQEEFKKHFPDVRLSIVHSSYRSLQ NPILRYVDLVSKNATKHNYSTTVLVPQFVPNKRWQNILHNQTSLRLRIRLAWRENIIVAT YSYHLKK >gi|237663580|gb|GG668938.1| GENE 23 24056 - 24520 292 154 aa, chain - ## HITS:1 COG:L69304 KEGG:ns NR:ns ## COG: L69304 COG0454 # Protein_GI_number: 15673990 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 6 149 4 148 152 101 37.0 6e-22 MSNYTIIDLNQQPHLIPSAAQWFSQKWQIPAEAYQASMQEMLTSENHVPHWWVCLNKQQD IVAGVGVIDNDFHNRADLTPNLCALYVEPTFRHQGLAGILLTTVGDFLANSGFKKLYLLT DHTTFYERYDWEFLTMVTTEEQSCARIYQKQLRQ >gi|237663580|gb|GG668938.1| GENE 24 24592 - 25254 850 220 aa, chain - ## HITS:1 COG:BS_opuCD KEGG:ns NR:ns ## COG: BS_opuCD COG1174 # Protein_GI_number: 16080433 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Bacillus subtilis # 4 217 1 214 229 251 65.0 6e-67 MNNMNLFQQFIYYFQQNGGYVFQQFLRHFLISIYGVIFAAIVGIPIGIMISRKRSLANWI IRLANIIQTVPALAMLSILMLGMGLGVNTVVVTVFLYSLLPIIKNTYTGMIQVDRNILDV GKGMGMTKVQLLYMVELPLSVSVIMAGIRNALVVAIGITAIGAFVGAGGLGDIIIRGTNA TDGASIILVGALPTAFMAIITDWVLGIIERRLDPASKHSN >gi|237663580|gb|GG668938.1| GENE 25 25258 - 26178 1174 306 aa, chain - ## HITS:1 COG:BS_opuCC KEGG:ns NR:ns ## COG: BS_opuCC COG1732 # Protein_GI_number: 16080434 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Bacillus subtilis # 1 304 1 303 303 342 55.0 5e-94 MKKKLKLSLLFLSSLLLLAGCSLPGLASTSDDNTVAITGGITSEAQILGSIVADMVEHYT DKKTNVINNLATTTINHQAMLNGDASISAARYTGTDVTTTLGLPAEKDPKKAFNLVQSEF EKRYQQTWFPSYGFENTYVFLVTKETAEKYNLKTVSDLGKVADKLVAGVDTAWITREGDG YEGFKKEYNFQFKSILPMQIGLVYDAVNAGKMDVILGYSTDGRIGSYDLVMLKDDKRFFP PYDAAPVVSDKLLKETPEIKDVLNRLDGKISTKKMQELNYQADNDLIEPAVVAERFLKEN NYFEGE >gi|237663580|gb|GG668938.1| GENE 26 26181 - 26816 812 211 aa, chain - ## HITS:1 COG:lin1466 KEGG:ns NR:ns ## COG: lin1466 COG1174 # Protein_GI_number: 16800534 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Listeria innocua # 3 211 6 214 218 244 65.0 1e-64 MSSFFQEYGSEMISKSIEHIYISFFALLLGVAIAVPVGVWLTRLPKVANIVIGLTSALQT VPSLALLALMIPIFGVGKTPAIIALFIYSLLPILRNTYIGMKNVDENYRDVAKGMGMTNL QSIFSVELPIAMPTIMAGIRLAAVYVIAWATLASYIGAGGLGDMIFSGLNNYQPELIFGG TIPVTILALLADVLLGLLENRLTPKALREGE >gi|237663580|gb|GG668938.1| GENE 27 26820 - 28004 1392 394 aa, chain - ## HITS:1 COG:lin1467 KEGG:ns NR:ns ## COG: lin1467 COG1125 # Protein_GI_number: 16800535 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, ATPase components # Organism: Listeria innocua # 1 393 1 392 397 488 65.0 1e-138 MIEFQHVSKFYKGGKVAVDDINLSFDKGEFICFIGTSGSGKTTSMRMLNRMTDPSKGKIL IDGQDIQKINPVELRRQIGYVIQNIGLMPHMTIRENIVLVPKLLKVPVEERNKIAEKMID LVELPREMLDRYPNELSGGQQQRIGVVRALAANQDIILMDEPFGALDPITRDSLQDLVKD LQERLGKTIVFVTHDMDEALKLANKIAIMSEGKVIQFDTPDNILRHPANEFVEELIGEDR LLQAKPDFTTVDEVMLNSAITITPEKSLQEAIKLMREKRVDTLLVVDNSHVLKGFIDVET LDQQRGKASSVGDILNKDVFFVQKTALLRDALQRILKRGLKYVPVVDEQKRVVGILTRAS LVDIVYDVIWGDETTISEAVEAKQSESETDKEEA >gi|237663580|gb|GG668938.1| GENE 28 28640 - 29530 999 296 aa, chain - ## HITS:1 COG:lin0752 KEGG:ns NR:ns ## COG: lin0752 COG0346 # Protein_GI_number: 16799826 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Listeria innocua # 6 296 6 295 296 277 48.0 1e-74 MHAQFHHVSLLARHGQENQSFYTKLLGLRFVKNTVNQDNNRMPHYFYGDYQGTPGSLVTF FIVPLLGNRYEEKNYLATIGLKIPQNSLSFWEQRLTENKIPFNKKEKSLHFSDPDDTHII LTEVPENPLKETLVVSNDIPAAVQIIGLASTEFHVPDSEKTLAFFETFLGWQAVGNTIIL SETESFSVHQTTSDKTSRMGRGSMDHIAFSVADDEALQELHTRALAQGWEIEMYVSRGYF KSLYIREPGGNRVEFATLAPGFTLDEPLEHLGETLALPPFLEPKRTAIEANLYKDM >gi|237663580|gb|GG668938.1| GENE 29 29696 - 30727 1208 343 aa, chain + ## HITS:1 COG:SP1416 KEGG:ns NR:ns ## COG: SP1416 COG0809 # Protein_GI_number: 15901270 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Streptococcus pneumoniae TIGR4 # 2 342 1 341 342 550 77.0 1e-156 MLSTEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGDMEDKHFHDILDELQPGDALVMN NTRVLPARLYGEKPETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQFGDGRLKAVV KEELEHGGRIIEFKYDGIFLEILESLGEMPLPPYIKERLDDPDRYQTVYAEENGSAAAPT AGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHMHSEFYRLTEEAAKQL NEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITPGYQFKVVEAFSTNFH LPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGDAMFIK >gi|237663580|gb|GG668938.1| GENE 30 31072 - 31320 273 82 aa, chain - ## HITS:1 COG:MJ0272 KEGG:ns NR:ns ## COG: MJ0272 COG1476 # Protein_GI_number: 15668446 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Methanococcus jannaschii # 8 72 13 77 79 68 49.0 4e-12 MRKKKKSSFESSIHVYRAMARMTQQDLANRVGVSRQTIIQLERNKYNPSLLLAHDIANVF GVTIDDVFTFKETLNDDVEQEA >gi|237663580|gb|GG668938.1| GENE 31 32200 - 34845 3178 881 aa, chain + ## HITS:1 COG:lin0814 KEGG:ns NR:ns ## COG: lin0814 COG0474 # Protein_GI_number: 16799888 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Listeria innocua # 5 869 5 868 876 877 54.0 0 MEAYKQTVDTVTKEVSVNTETGLTQQEAQQRLKENGRNQFEEAKKDSVLKKFIHSLSDFT TIILLVAAAISFYTAIVTEHGEYFEGILIIAIVIINAVLAIVQEGNAEKSLAALQDMNKQ SSAVLRDGKVIEVDAEELVVGDVLVLEAGSMITADARLIQASQMRVEESALTGESEPVEK DPTYVGHDDDGLGDQINMIFKGCTVVNGRGRAVVTATGMNTEMGKIAGLLNNSDQQKTPL QKRLNQLGKRISLLALGAAAIVFIIGELQGEPLLEMFMTAVSLAVAAVPETLTVIVTLTL AYGVQKMAKKHAIIRRLPAVETLGTANVICSDKTGTLTQNKMRVRRVWHRGDEVTDTEDA MTDEAMEVLKMAALCTDVIVEKEGDELTVTGNPTEAAIVRAVEENYHTKEELEEKYPRIG EIPFDSERKMMTTVHQWGKKYISITKGAFDVLLPRFGFGDVDQAAIVNDRFGKRALRVIA VGYAVYDEPPKEITSEALEKNLRLLGLIGMIDPPRPESKGAIARAKKAGIKTVMITGDHV VTASAIAKELGILKDKSEALSGSELKKMSDEELDKRVKDLSVYARVTPEDKIRIVQSWQR SGAVVAMTGDGVNDAPALKASDVGCAMGITGTDVAQGASDMILTDDNFATIVDAVAQGRA VYRNIRKAINFLLSCNISEIFIVLIAMLLGWGAPFTAVQLLFVNVVADGLPGFALGKEPA EKGIMDEAPIPKNEGIFARGLWQKIGINSAVFTVITLFGFYLGAFVPGVSAYVSNSYEVG QTVAFLILAYSSILHVFNVRSANSVFRVKLSSNKSLFEMVVLALLITTTIALLPFTQELF GLVHISLNHWMLAIFLSFVPIFVNEMIKFHFSEVDEEEEVI >gi|237663580|gb|GG668938.1| GENE 32 34890 - 34961 59 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKGKSKISGAAVETTAAPLANY >gi|237663580|gb|GG668938.1| GENE 33 35179 - 37185 1789 668 aa, chain + ## HITS:1 COG:SPy1414 KEGG:ns NR:ns ## COG: SPy1414 COG3158 # Protein_GI_number: 15675333 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Streptococcus pyogenes M1 GAS # 12 653 11 647 666 751 58.0 0 MLHKAEGFDRRKFTMAGILVAMGVVYGDIGTSPLYVMKAIVGDNGGLARVSESFILGSVS LIFWTLTILTTIKYVVIALNADNHGEGGIFSLYTLVRKKSKYLIIPAMIGGAALLADGVL TPAVTVTTAIEGLRGIPAFFERFGNDQTIIVVITLTIILILFSVQRFGTELVGKAFGPIM FMWFTFLGIIGLMNFSQDWTVIRALNPYYALQLLVSPENKLGLFILGNIFLATTGAEALY SDLGHVGKMNIRISWPYIKICLILNYLGQAAWLLTVKENPEMQALAEINPFFQMIPRGIL VFGVVFATIAAVIASQALISGSYTLVSEAIKLKLLPRLKIIYPGSNIGQMYIPAVNLILW LACSAIVLAFRTSTHMEAAYGLSITITMLMTTILLLFYLLDKIPAWSAYLISLFFAAIEV VFFFSSAAKFFHGGYVAVGMAVFLLCIMIIWERGNEIKEATAEQVSLEKYVPQLKALKED TSVPMYQTNVVFLTSDRVDGEINRNIIYSILDKQPKRANVYWFVNVQVTDEPFTQEYSVD MLGTDFIVQVQLYLGFHISQEVNVYLRQIVHDLMKTGRLPKQPQRYSLTPGREVGDFQFV LIQEELSNVSELKKWDRQIMQAKLAIKNLTTSPESWFGLEYSEVKYESVPLIIGPQRKTH LVERKNRS >gi|237663580|gb|GG668938.1| GENE 34 37255 - 37953 615 232 aa, chain - ## HITS:1 COG:no KEGG:EF0873 NR:ns ## KEGG: EF0873 # Name: not_defined # Def: Cro/CI family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 232 1 232 232 417 99.0 1e-115 MKITTKQVGARMREARKKKKYTLRYLANKIGLSSGSTISNWELGLNLPNKRYLKKIAKAC DTTVDWLLYGDFDRFVRQLLKENFQNKQLLKPPFFTQLMIRLSEEQLSYHDSLKIMIQAQ KLQQSFYAFPLTVEAPSHSQESISIYEPTTAEEQSDQSYYHPFILSELHELFTHSQNPEL DYSLIIAFLPLLKVDQLTEPQKEVLLAIFKRMNSFKDQTLLNEFFVELQYLL >gi|237663580|gb|GG668938.1| GENE 35 38118 - 40223 2153 701 aa, chain + ## HITS:1 COG:MA0166 KEGG:ns NR:ns ## COG: MA0166 COG2217 # Protein_GI_number: 20089064 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Methanosarcina acetivorans str.C2A # 4 698 63 763 764 565 43.0 1e-160 MSAKHNHEQHQEKQPTMSHDKMNHMNHDMAHEQMAMSHQHEGMKGMDHSMHMGNFKQKFW LSLILAIPIIVLSPMMGFQLPFQFTFPGSDWLVLILATVLFFYGGQPFLSGAKMELQQKS PAMMTLIAMGISVSYFYSLYAFYMNHFTNQAHVMDFFWELATLIVIMLLGHWIEMNAISN AGDALKKMAELLPDTVKRMTEHGEEEIPLQDVQEGDRLIVRSGDKIPTDGKILKGSTTVD ESMVTGESKTVEKNIGDSVIGGAVNGNGMIEISVTGTGENSYLSKVMEMVKQAQSEKSKL ESISDRVAKWLFYIALFVGVLAFIGWLLVTKDLSLAFERMVTVFIIACPHALGLAIPLVI ARSTSIAAKNGLLLKNRNALEQANKVEYVLLDKTGTLTEGQFTVTGLELMSKQFTREEAL KYIGALEKNANHPLAIGIMNYLNKQAVQPYEAHNLQALSGVGLVATVQNQEVKIVNEKEV ARLQLTFDETIKTNYQEQGNTLSYLIIAGQLVALLALGDKVKPEAKTFIAELQAQGITPV MLTGDNQTAASAVANYLGMKEYYAELLPEDKEKIVQQYLTEGHQVMMVGDGINDAPSLAR ASIGIAIGAGTDVAIDSADVVLTDSDPKDILRFLDLAKQTRRKMIQNLWWGAGYNIVAIP LAAGVLAPIGIVLNPAVGAVLMSLSTIIVAANAMTLHISKK >gi|237663580|gb|GG668938.1| GENE 36 40347 - 41771 577 474 aa, chain + ## HITS:1 COG:no KEGG:EF0876 NR:ns ## KEGG: EF0876 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 473 1 473 474 844 96.0 0 MDFKELLSFEHKNMLELLDLLQQEQTFSVLMAAEKLKVSDKTIHCYIQRFEKKQETFKIE GLCKIYTTTKGIVKYHELCVCGLARFRQKFCYFIPEFYILRCLIEERINYAQLTQVLGLQ ESTLRKKLSNIRRWLVNFDIIVRQKHYDLTGNEWQIRQLILCFYLFFQESCLEENREMTR KIITFFELDLNVAQQNHLSWLIYIWERRYRDGHGISVPNANLFQQTSAFFYLFRVEVLST SFISLKEQKALFVILEAHFGGCFGKRARKYFIHEQMKIESLCLKTAIFIMKEIRRNFTQH HFNYQEIHLCRFLSTHMNSLLDGQTWLPAHKQEQILAVRYQQTWHRLQKLIRLLKRLYPV FTSVKERELTSCYFYHILDLFDPILYEKKYIICLLTDFPPEKEQALGQSIKNYFSEKKNI TIIHGKPTYQLHQAHLLIVNHFFQMNVALSSETVVYLPEELSPAFFEKVEANLP >gi|237663580|gb|GG668938.1| GENE 37 41840 - 42751 1109 303 aa, chain + ## HITS:1 COG:lin0643 KEGG:ns NR:ns ## COG: lin0643 COG4989 # Protein_GI_number: 16799718 # Func_class: R General function prediction only # Function: Predicted oxidoreductase # Organism: Listeria innocua # 1 303 1 305 305 390 60.0 1e-108 MKQLQFGTSDETVSSVVLGCMRLNGAENPQQVIETAYDHGITFFDHADIYGGGDCETIFG KALKESAIRREDIFIQTKCGIRQGFFDFSKAHILEAVEGSLQRLGVDSVDALLLHRPDTL VEPEEVAEAFHLLEKQGKVRYFGVSNQTPGQIELLKTAVKQPLLANQLQFGIKHTGMVDQ GLQTNMEISGSIDYDHGILDYSRLKQMTIQAWSPYQYGYFEGVFIGNEKFPELNQKLSEL AEKYQTTPTGLASSWILRHPANMQVIAGSMNLGRIEEIAKAADIVISREDWYDIYRAAGN VLP >gi|237663580|gb|GG668938.1| GENE 38 42939 - 44231 1555 430 aa, chain + ## HITS:1 COG:SP0032_1 KEGG:ns NR:ns ## COG: SP0032_1 COG0258 # Protein_GI_number: 15899978 # Func_class: L Replication, recombination and repair # Function: 5'-3' exonuclease (including N-terminal domain of PolI) # Organism: Streptococcus pneumoniae TIGR4 # 1 319 1 316 316 362 57.0 1e-99 MTKKKLLLVDGNSVAFRAFFALHNSLERFKNKNGLHTNAIYAFNNMFENVMQKEMPTHVL VAFDAGKTTFRTEFYSEYKAGRSKTPGEFKEQMPYIRELLEGLGVKYYELPNYEADDIIG TLANKVDKDEYDVVVLSGDRDLTQLATDTVKVDITVKGVSDIESYTPEHIAEKYDGLTPK QIIDMKGLAGDTSDNIPGVTKIGEKTAIKLLKQYGSVEGVYENIDEMKKSKMKENLINDK EQAFLSKRLATIEVNAPVEVNVEDLAYEGKNLEKLVPFYKEMDFKQFLAKLDITEEPVEM EDILFEVVEDQLTNEMFTDDMALYVEMMEDNYHTSPIVGLAWGNDKKIYTTNNLAVFESQ PFIDWLMDETRKKNVYDAKRTYVALNRYVGKMTGIAFDVLLAAYLLDTNDNNADIEGVAQ HYGYDAIQSS >gi|237663580|gb|GG668938.1| GENE 39 44438 - 45640 1496 400 aa, chain + ## HITS:1 COG:L0270_2 KEGG:ns NR:ns ## COG: L0270_2 COG0749 # Protein_GI_number: 15674124 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Lactococcus lactis # 1 400 150 548 548 532 68.0 1e-151 MELPLSRILGDMEITGIRVDATRLKEMQVEFSERLKEIEEKIYAEAGEEFNLNSPKQLGV ILFEKMGLPVIKKTKTGYSTAVDVLEQLKEQAPIVADILTYRQIAKIQSTYVEGLLKVIQ PDNKIHTRYVQTLTQTGRLSSVDPNLQNIPIRLEEGRKIREAFVPREDNWLIFSSDYSQI ELRVLAHISNDEHLKEAFVEGQDIHASTAMRVFGVEKAEDVTPNMRRQAKAVNFGIVYGI SDYGLSQNLGITRKQAQQYIDTYFEKYPGVKQYMEEIVRDAKDKGYVETLYHRRRYLSDI NSRNFNLRSFAERTAINTPIQGSAADILKIAMIEMARRLKEEKLQATMLLQVHDELVFEV PESELEQLNQLVKEVMEHAVSLHVPLITDSSWGKTWYEAK >gi|237663580|gb|GG668938.1| GENE 40 45740 - 46582 894 280 aa, chain + ## HITS:1 COG:lin1599 KEGG:ns NR:ns ## COG: lin1599 COG0266 # Protein_GI_number: 16800667 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Listeria innocua # 1 273 1 273 273 281 50.0 1e-75 MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQTSEGIERRGKF LIFKLSDNDMISHLRMEGKYEFHQADDEIAKHTHVMFTFTDGTQLRYLDVRKFGRMTLVP KNQGHQYKGILALGPEPTPDVFQLATFQQGLKKHHKAIKPLLLDQKLVTGLGNIYVDEAL WQAQIHPEQPADSLKPVEVATLYQAIIDVLARAVEAGGTTIRTYLNALGEAGTFQVALNV YGQTGLPCNRCGTPIVKTKVAQRGTHYCPQCQQLKGRRLK >gi|237663580|gb|GG668938.1| GENE 41 46579 - 47178 720 199 aa, chain + ## HITS:1 COG:BS_ytaG KEGG:ns NR:ns ## COG: BS_ytaG COG0237 # Protein_GI_number: 16079958 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Bacillus subtilis # 1 190 1 191 197 171 50.0 6e-43 MTKVLGITGGIATGKSTVVALFKKAGYPIVDGDIIAREIVAKGQPALAAIVETFGPEIVL TTGELDRKKLGQLIFANPQKRELLNETLKPFLRKEILRQIEEAKKKAALVIVDIPLLYEA HYEAIMDQVAVVYVPEKIQKERLMARNQLTEEEAQQRIASQWPIEMKKERADIVFDNQGT REETEQQVKKWLEEQTEEK >gi|237663580|gb|GG668938.1| GENE 42 47358 - 47840 542 160 aa, chain + ## HITS:1 COG:BH3146 KEGG:ns NR:ns ## COG: BH3146 COG1327 # Protein_GI_number: 15615708 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Bacillus halodurans # 1 150 1 150 153 181 61.0 4e-46 MRCPRCHHNNSRVIDSRQADDGRAIRRRRECENCSYRFTTFERIEAAPLLVIKKNGDREE FNRDKILRGLIRSAEKRPVAMEQMVQIVDNVENRVRSLGENEVSTTLIGEYVMEDLVNLD EIAYIRFASVYRQFKDMSVFLKELQDIVDKAKSSSPDSEN >gi|237663580|gb|GG668938.1| GENE 43 47856 - 49265 1571 469 aa, chain + ## HITS:1 COG:BS_dnaB KEGG:ns NR:ns ## COG: BS_dnaB COG3611 # Protein_GI_number: 16079951 # Func_class: L Replication, recombination and repair # Function: Replication initiation/membrane attachment protein # Organism: Bacillus subtilis # 20 465 20 465 472 119 25.0 1e-26 MKGNRQRIQPKNIFQAVIDSPLSDQEKEVLTFLYQPIVGANAFSLYWLLLSETTDSEENG SLFHADLISLLDLSCQQLEEACYKLEGIGLLETYKKTDRELGDCYLYYLKAPETAARFFK DEVLALVLFNRVGQRKFDQLVQKFQPHPTKTEGYQNVSASFQEVYAFKEEQIVSEANRLT TIQETFSQQEKSKKISVSTDSFDWHYFVEGLHRLGLQLPEDEASFQEEVYVFHQLYGINE LDMVDFASKSFDYYTSRILPKELVRTIHQAFDPDKKPQSTNVVTNKEAQLTVEEQQTYRY NALKMNGFSELDIQMIMDSEKNPPIQYLEALKNSRGGYTTPQERSLVKYLVAKSGLPTSV INILINYVYNIQQQPTLKAEYVNRIANEWGQSGIHSPEKAIEHVRELAKQSQTKQKQRQQ NYSGKRQTVRQERLPEWADQPNDETKLSPEEQAELDRQIQEFLNQGGDQ >gi|237663580|gb|GG668938.1| GENE 44 49265 - 50194 1100 309 aa, chain + ## HITS:1 COG:lin1595 KEGG:ns NR:ns ## COG: lin1595 COG1484 # Protein_GI_number: 16800663 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Listeria innocua # 1 307 1 306 307 274 47.0 1e-73 MEDVGKEMSKIIQKRDINERYEELVNEVLKDQDVQAFIQANRERLTDEDIRKSYAKLYEF VQEKKKFQLNDPAMIAPGYEPRLMLNFHYIDVTYVPTADLIARQKEEEIRNRVRAMDMPK DVREANLRDFDPSSQGRAKALAEAMQFLREYPATPKEFHKGLYLQGPFGVGKSFLLGAMA NALAERGFTTTIVHFPTFTVEMKQAIGRDQVGEKLDAVKKSPILMIDDIGAESMTSWIRD DVLSVILQYRMQEQLVTFFSSNLDLKALEEHLTVTQRGEQEPLKARRIMERVRYLSKEIT MTGNDRRNG >gi|237663580|gb|GG668938.1| GENE 45 50420 - 51484 963 354 aa, chain + ## HITS:1 COG:no KEGG:EF0884 NR:ns ## KEGG: EF0884 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 354 4 357 357 641 99.0 0 MNPKIQRLMSTDKQHFLTKHEFHTKETAERKDLLKFFIETRLKTDGGFLTNYLPDAERKD VATGHELLSESSGLYLRDLAFDTQGRFDNFYKQTKDTFYDGVQFSYRIDEQGNKYNVNAS IDDLRIIRSLIEAGGHFNTDQYDQEIKKLGKSFMKTSMKDNILIDFYDSKSKQQSSETSL FYIDLITLGYLYKEFGISADYLQYHYQLIDDGYISDDLPLYQTKFNHQTNKYENNGTLNI IESLLTIVHLSEVGMAKQTSIDFVRKQVQQGTLFNSYDLNGSPVDKNQSAASYAIAALIG VAENDKELYRAAITVLNNFQIMDSSSPIYGGFGDKVTKQVYSYNNLMALLAYDF >gi|237663580|gb|GG668938.1| GENE 46 51498 - 53018 1131 506 aa, chain + ## HITS:1 COG:no KEGG:EF0885 NR:ns ## KEGG: EF0885 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 506 1 506 506 917 99.0 0 MEKIKKHMNSAFEWLSRYISPSLLAVLGIGLVTSILLFVYPINGLGDNGEYFRVLNSNSL YRVNGDSYDNVAYFVKDFSIMRYFNETTTHFVSTQQFFITVAIWLNKLFYSQTLFDIRFL GFVYLSCFLVSIYILVRGLTEDVSLKKSYLISLLVIFILGDTSYTIYFNSFYTEATSFLL SVSVLAFSVYFYRVTKPRTWLRRIILVILAQAVVLLIGTTRQEYLLIIGVIIAGLGFFVY LSQRYQRLSMTAFLIALIGFTTLAAFIVPNDIYERDVYHSMTRGVMKDSKVPDKRMSEGG INPQYGLQKGRSYFEEYSPVSPTSEQMKKDFFDKTSFGWVLLNYLNYPSELWQGLNSAVP NVYLVKPNNVGNFEKTTGRAPLEQSKFFMVYNRIKASFFPKNFAFYLLLGVILFGLYGVG LYRGLKRNEPRLVFRFFLMTGIYLNLLVVFISTIIIDGDSDLVRHLFLVSVFLDFLLLQI VSDVIGKRMWQDTTPQVIGEVKKIEK >gi|237663580|gb|GG668938.1| GENE 47 53008 - 54591 1407 527 aa, chain + ## HITS:1 COG:lin0532 KEGG:ns NR:ns ## COG: lin0532 COG5298 # Protein_GI_number: 16799607 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 25 521 22 498 499 95 22.0 2e-19 MKNKQYLIGWVCFLLFFVFCGFAKPALAAPSKHVLLVYDSLNIAGKKENDVDALQRVLTS FGVEVQSVAVSDYVPGELLNDGYDSLISMVNWPEQAGVIASDFLADRVHFKGKQLHIGRN MRDDEKQYFSGTWKELSHRQYRLEDEKKRFSQVLPFQDQSVVLENTQGQTVGRLKTQELA PEEYPFGVIENGHAFLPMFERKGAVFLESLDVISQWLESEKMSRPFLTISDFNPLRDMSV ATYLQEELVKTTYPYILSSTSVSQNNTILPYKLFTNALRAFASTGVIFLETPVVNNVDLN DQRALKQLMAQQISLLVDRHVYPVGISAPGYWNQDLQYQEDGLAISDTVILRENPPIERV FYRNQTGESITYKNALFDLPYDYLSGIEWTDKDNPNDYRFPMPTTISFSFPNSKKEVDHL IQEVKEAPIVFSVSEADQHFTVQTQTQKIEFRNNRFFLNNQIVNGLADTGASTVEKQRFT GLFSFFFSITNNILIGVVTLTLIILIILFMIGRKNYRSKYINKEEDK >gi|237663580|gb|GG668938.1| GENE 48 54588 - 55850 1167 420 aa, chain + ## HITS:1 COG:lin0533 KEGG:ns NR:ns ## COG: lin0533 COG1215 # Protein_GI_number: 16799608 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Listeria innocua # 1 419 1 416 416 578 68.0 1e-165 MTIADIVMLTATIIIWSLLIVNILLVIFGYVYYLKTDPVAPPPVEDEDAPFVSIMVPAHN EGIVIVRTVEALLNFNYPQDRYEIIVINDNSSDNSAELLANVKKKAVNRNLQIINTDNIT GGKGKSNALNIGFKQAKGDVIAIYDADNTPEPNALRYLVGELIASEEYGAVIGKFRTRNR NASLLTRFINIETLAFQWMAQAGRFQLFKLCTIPGTNFIVRRSIIEAIGGWDDKALAEDT EISFRIYMMGYKIKFQPKAVTWEQEPQTLSVWFRQRTRWVKGNIYVIVKNAKLLFNPKAS RIRFDILYFLSIYFLLMTSLVLSDIMLVLSMSGYLTTTLQGFSNSLWLLAILLFIFSTFV SITTEKGEMTLENILIIALMYITYSQMWLVVAAYGMVMYIKENVFHKQTQTKWYKTERFK >gi|237663580|gb|GG668938.1| GENE 49 55865 - 57931 1941 688 aa, chain + ## HITS:1 COG:no KEGG:EF0888 NR:ns ## KEGG: EF0888 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 688 1 688 688 1279 99.0 0 MKQKTVTLIGLFFLAILIGVASPTVYAENKEQDNHTFTQPFQNKTISLTGTSVRSTMYFT KIDYWDVKKASFNMTYQITQLKNNQTSDLTVAVNGVKFYSWRPENTTGIQQKTIEIPLEL IKETNTLTVEGQIINQAGNDMYNLIETPANWLTMYEGSNVNFQYDLQLPENTIHSFYNHF VGADTIANKHSVILTPENASEKELAAATHALAGAARLITTSEELLPMASLNKEQSAPYQL IIASYDKLPDQYKSQIDSKRVEDQAVLKFFNQPDKHVLVATSKDEDLLVRAGRYLANYEL MTQTDKEETTVDENTDTFSSTLEFDGNYPLTSTGDKLEGAYHQEQTYFVNLPVDRNNANG SRVHLHFKYAENLDFDSSLVTVYANDKPIGSKKLSAARANGDELNLEFPKNLEIADSFVL KVAFDLNVKSPEVLRNGQTPWAFIENNSNAFIQTEELNDILFNNYPNIFIRSRSFADLAI LLPEKMDDNYFKVLTNLFNLIGNYAESNVGEITYYKKAPKNAALENHNLIIFGTPKDNPM IRKLNDQLYFHYDKDFTRFVSNEKLSIEKDYGKQIGTAQLMFSPYNAKAAALILTGAKSQ GVFLASTQVNTEKNTSMYKGDAIVVDPNYRRYDYRFKKRVSNVSNESLGKRIVNNHKLMI YLFVFLIGMTIIGLSAFFIVKKNLKGGE >gi|237663580|gb|GG668938.1| GENE 50 57933 - 58781 943 282 aa, chain + ## HITS:1 COG:lin0535 KEGG:ns NR:ns ## COG: lin0535 COG2199 # Protein_GI_number: 16799610 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Listeria innocua # 4 282 2 284 284 120 27.0 3e-27 MNQKRVTLLLDLTLLVGIVLVVGTTIFMALGTNDFFVDLSCLLISVILIIVTYFVGITAG LTFSLIFIFLQLTYVVYQYVYHDLFSYGSLFWLIMPPLYCLTIYAVTYQIRTIEEENIRL RKETSQLNALDAVTNLRTAKMYEEGFDLFSDISTRYEAPLYLVVIRVAYWESIRNLLSPE QKNELLQIVTAAIKETTDDRFLPYFIDGTPPTWALLIFRDGDDGYTTRKEFKQQAQEKFA HSETLRNITLTLQVSYTKYDPAEFNNASEFLGDGINSLQYDV >gi|237663580|gb|GG668938.1| GENE 51 58797 - 59108 389 103 aa, chain + ## HITS:1 COG:no KEGG:EF0890 NR:ns ## KEGG: EF0890 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 103 1 103 103 172 99.0 3e-42 MTEKIAVFTGKLAEAGVLNETQPLSMRLHLENIQAESDPESIVPLFSHGVILNILVEQLE ESIPLSHLKKGTKVRFTVVGLPPMTMSIPPHVGGQAIELIEEI Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:30:39 2011 Seq name: gi|237663579|gb|GG668939.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD18, whole genome shotgun sequence Length of sequence - 61873 bp Number of predicted genes - 60, with homology - 59 Number of transcription units - 32, operones - 15 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 362 - 2275 2054 ## COG1193 Mismatch repair ATPase (MutS family) + Prom 2304 - 2363 4.0 2 2 Tu 1 . + CDS 2393 - 3808 1785 ## COG1785 Alkaline phosphatase + Term 3818 - 3863 9.1 + Prom 3836 - 3895 8.0 3 3 Tu 1 . + CDS 3920 - 4891 1032 ## COG1834 N-Dimethylarginine dimethylaminohydrolase + Term 4926 - 4965 -0.7 + Prom 5028 - 5087 9.4 4 4 Op 1 . + CDS 5318 - 6010 1062 ## EF2970 hypothetical protein + Term 6046 - 6083 3.1 5 4 Op 2 . + CDS 6098 - 7231 1192 ## EF2969 hypothetical protein 6 4 Op 3 . + CDS 7215 - 7613 225 ## EF2968 cell wall surface anchor family protein 7 4 Op 4 . + CDS 7660 - 7884 242 ## EF2967 hypothetical protein + Term 7886 - 7939 14.4 + Prom 7890 - 7949 7.4 8 5 Op 1 2/0.000 + CDS 8050 - 10059 1598 ## COG3711 Transcriptional antiterminator 9 5 Op 2 11/0.000 + CDS 10061 - 10360 189 ## PROTEIN SUPPORTED gi|148984431|ref|ZP_01817719.1| PTS system, IIB component, putative 10 5 Op 3 . + CDS 10375 - 11742 1705 ## COG3037 Uncharacterized protein conserved in bacteria + Term 11754 - 11823 19.0 - Term 11750 - 11804 16.3 11 6 Tu 1 . - CDS 11807 - 12781 628 ## COG0657 Esterase/lipase - Prom 13014 - 13073 6.0 + Prom 12884 - 12943 4.2 12 7 Op 1 13/0.000 + CDS 12993 - 13988 908 ## COG1609 Transcriptional regulators + Prom 14002 - 14061 6.7 13 7 Op 2 6/0.000 + CDS 14086 - 14997 1188 ## COG0524 Sugar kinases, ribokinase family 14 7 Op 3 1/0.273 + CDS 15013 - 15408 519 ## COG1869 ABC-type ribose transport system, auxiliary component 15 7 Op 4 . + CDS 15429 - 16316 983 ## COG4975 Putative glucose uptake permease + Term 16321 - 16367 6.6 16 8 Tu 1 . - CDS 16336 - 17220 982 ## COG0583 Transcriptional regulator - Prom 17254 - 17313 6.7 + Prom 17213 - 17272 5.8 17 9 Op 1 1/0.273 + CDS 17328 - 17909 649 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 18 9 Op 2 . + CDS 17909 - 18646 904 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity 19 9 Op 3 . + CDS 18687 - 18755 72 ## 20 9 Op 4 . + CDS 18828 - 20141 1492 ## COG2252 Permeases + Term 20163 - 20213 11.2 + Prom 20197 - 20256 7.0 21 10 Tu 1 . + CDS 20301 - 21515 1472 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase + Term 21520 - 21569 11.5 + Prom 21558 - 21617 4.5 22 11 Op 1 . + CDS 21645 - 22292 613 ## COG2344 AT-rich DNA-binding protein 23 11 Op 2 . + CDS 22356 - 22844 734 ## COG2077 Peroxiredoxin + Term 23026 - 23074 -0.6 + Prom 23139 - 23198 7.3 24 12 Tu 1 . + CDS 23236 - 25878 2930 ## COG0525 Valyl-tRNA synthetase + Term 25883 - 25935 16.2 - Term 25876 - 25918 11.4 25 13 Op 1 . - CDS 25925 - 26524 426 ## COG0398 Uncharacterized conserved protein 26 13 Op 2 . - CDS 26517 - 29081 2263 ## COG4485 Predicted membrane protein - Prom 29217 - 29276 6.1 27 14 Op 1 . + CDS 29330 - 30652 1466 ## COG0285 Folylpolyglutamate synthase 28 14 Op 2 . + CDS 30639 - 31295 651 ## COG0637 Predicted phosphatase/phosphohexomutase 29 14 Op 3 . + CDS 31352 - 32050 686 ## COG2003 DNA repair proteins + Prom 32078 - 32137 7.8 30 15 Tu 1 . + CDS 32204 - 32404 380 ## COG1278 Cold shock proteins + Term 32423 - 32456 3.1 - Term 32449 - 32496 11.4 31 16 Op 1 7/0.000 - CDS 32510 - 34195 1644 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 32 16 Op 2 . - CDS 34197 - 34409 237 ## COG5503 Uncharacterized conserved small protein - Prom 34453 - 34512 7.4 - Term 34506 - 34542 -0.4 33 17 Tu 1 . - CDS 34714 - 35100 415 ## COG2832 Uncharacterized protein conserved in bacteria - Prom 35120 - 35179 4.1 34 18 Op 1 35/0.000 + CDS 35329 - 37056 243 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 35 18 Op 2 . + CDS 37053 - 38819 217 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Prom 39121 - 39180 71.9 36 19 Op 1 . + CDS 39256 - 39747 393 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 37 19 Op 2 . + CDS 39764 - 40912 1291 ## COG0381 UDP-N-acetylglucosamine 2-epimerase + Term 40921 - 40965 3.5 38 20 Tu 1 . + CDS 41009 - 41662 741 ## COG0546 Predicted phosphatases + Prom 41777 - 41836 11.0 39 21 Op 1 3/0.000 + CDS 41870 - 43255 1310 ## COG1559 Predicted periplasmic solute-binding protein + Term 43273 - 43318 9.8 + Prom 43365 - 43424 15.3 40 21 Op 2 . + CDS 43516 - 43995 741 ## COG0782 Transcription elongation factor + Term 44007 - 44044 2.0 + Prom 44067 - 44126 8.4 41 22 Op 1 7/0.000 + CDS 44146 - 44877 731 ## COG4758 Predicted membrane protein 42 22 Op 2 19/0.000 + CDS 44874 - 45977 839 ## COG4585 Signal transduction histidine kinase 43 22 Op 3 1/0.273 + CDS 45952 - 46584 817 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 46593 - 46658 17.6 + Prom 46601 - 46660 8.2 44 23 Op 1 . + CDS 46688 - 47344 837 ## COG0569 K+ transport systems, NAD-binding component 45 23 Op 2 . + CDS 47425 - 47736 545 ## COG4841 Uncharacterized protein conserved in bacteria + Term 47761 - 47797 0.5 + Prom 47857 - 47916 7.6 46 24 Op 1 2/0.000 + CDS 47940 - 48878 1017 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Term 48880 - 48924 11.1 + Prom 48885 - 48944 3.7 47 24 Op 2 10/0.000 + CDS 49088 - 50158 1081 ## COG3839 ABC-type sugar transport systems, ATPase components 48 24 Op 3 38/0.000 + CDS 50158 - 51033 778 ## COG1175 ABC-type sugar transport systems, permease components 49 24 Op 4 . + CDS 51038 - 51856 726 ## COG0395 ABC-type sugar transport system, permease component 50 24 Op 5 . + CDS 51840 - 53129 1353 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 51 24 Op 6 . + CDS 53153 - 54433 1609 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 54453 - 54511 12.0 52 25 Tu 1 . + CDS 54531 - 56084 1660 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases + Term 56099 - 56149 5.1 - Term 56079 - 56145 15.3 53 26 Tu 1 . - CDS 56148 - 57110 958 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 57142 - 57201 5.8 - Term 57179 - 57229 15.4 54 27 Tu 1 . - CDS 57259 - 58269 977 ## COG0492 Thioredoxin reductase - Prom 58399 - 58458 5.1 + Prom 58386 - 58445 6.0 55 28 Tu 1 . + CDS 58474 - 59064 869 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Term 59077 - 59137 11.4 + Prom 59103 - 59162 5.6 56 29 Tu 1 . + CDS 59228 - 59434 234 ## EF2896 hypothetical protein + Term 59438 - 59477 8.0 - Term 59426 - 59464 8.6 57 30 Tu 1 . - CDS 59468 - 60634 1144 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities - Prom 60755 - 60814 7.6 + Prom 60631 - 60690 6.5 58 31 Op 1 . + CDS 60800 - 61186 187 ## PROTEIN SUPPORTED gi|86608329|ref|YP_477091.1| putative ribosomal protein S1 59 31 Op 2 . + CDS 61260 - 61622 336 ## EF2893 hypothetical protein + Term 61631 - 61677 12.1 - Term 61619 - 61664 10.3 60 32 Tu 1 . - CDS 61704 - 61871 93 ## gi|256618321|ref|ZP_05475167.1| predicted protein Predicted protein(s) >gi|237663579|gb|GG668939.1| GENE 1 362 - 2275 2054 637 aa, chain + ## HITS:1 COG:CAP0099 KEGG:ns NR:ns ## COG: CAP0099 COG1193 # Protein_GI_number: 15004802 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 1 626 1 625 629 515 43.0 1e-145 MNHETIQKLQFTTILKEVQTRAIGEYSKERLAKMVPATRLETVQSRLTETTEARLIIDSG QHVPFMGLSQITRLLQQVKKGLILTPNELIEVADFLRSSQRIQKFFEKNQYQTPRLFSYS QHLADFRAIEEQIYTKIHNQKVATDASRQLRKIRRQINECQQDIETKVTKFLRNKNNQLY IQENMMVKKGEHYTVPIKASYKNKVSGTIIEQSNKGQTVFIEPVAISKLNEQLTLLKAEE TAEEYQILAELTGLINEQERLVDQAVDTMTTLDIIFARGKYSREIGGITPKVNKEERLRI VQGKHPLLLEHAVPLTFSLGAEYRGLVITGANAGGKTVVLKTVGLLTVMTQFGLQIPAQA GTEIPVLDEIFVDIGDQQNLENALSTFSGHMKNIAEMLRNVKRHTLVLLDEIGSGTEPNE GAGLAIAIMEMMYQKGALVVATTHYGEIKRFAQEHDDFVPAAMAFDRETLTPKYQLKIGE VGDSQALWIARKMKMEPQLIEKAAHYIQRKEYPTNRILFKPLKAKETTFATFVEETDRYQ KGDRVLLTETQQIGLVFTDEGEQEIQVFVNDKIENVPRRRLKLQAKAQDLYPQDYDLESL FTDFHERKKLKDIERGSKKAQKQLRKEAEKRAARRDK >gi|237663579|gb|GG668939.1| GENE 2 2393 - 3808 1785 471 aa, chain + ## HITS:1 COG:BS_phoB KEGG:ns NR:ns ## COG: BS_phoB COG1785 # Protein_GI_number: 16077641 # Func_class: P Inorganic ion transport and metabolism # Function: Alkaline phosphatase # Organism: Bacillus subtilis # 35 452 27 450 462 471 64.0 1e-132 MKKRALLGVTLLTFTTLAGCTNLSEQKSGEKQTEVAEAKATESEKAPVKNVIFMIGDGMG NPYTTGYRYFKANHSDKRVPQTAFDTYLVGQQATYPEDEEENVTDSASAATAMAAGVKTY NNAIALDNDKSKTETVLERAKKVGKSTGLVATSEITHATPAAYGAHNVSRKNMAEIADDY FDDQIDGQHKVDVLLGGGSELFARKDRDLVKEFSQAGYGHVTDKKSLNENQDDKILGLFA PGGLPKMIDRTEEVPSLADMTEAALQRLDKNEKGFFLMVEGSQIDWAGHSNDIVGAMSEM QDFEAAFEKAIDFAKKDGETLVVTTADHSTGGLSLGKGDQYNWLTEPLHAAKRTPDFMAE EIIKNGNVEKTVTEYIDFQLSEAELKAVKTAAESKDVEKIAQALRKIFDERSNTGWTTGG HTGEDVNVYAYGPQAEGFSGQIDNTDQAKIIFGLVDGTGQKAEIKDKGIGK >gi|237663579|gb|GG668939.1| GENE 3 3920 - 4891 1032 323 aa, chain + ## HITS:1 COG:MA3652 KEGG:ns NR:ns ## COG: MA3652 COG1834 # Protein_GI_number: 20092452 # Func_class: E Amino acid transport and metabolism # Function: N-Dimethylarginine dimethylaminohydrolase # Organism: Methanosarcina acetivorans str.C2A # 2 323 4 332 334 154 30.0 3e-37 MKKMHVESEFAPLRSVVLAQSQFCLPDKFDEADTTFLTEENARLTQNNEGRDLADFAPEQ QVRWEKEKEVMQGVLESYGVEVFRPRLLTTYEKEHGKELGVGYSNFFSRDPFFTIGNLLI EGNLRFQHRRQEILPIRPIIQQWTQEAEGYYFAAPQPDISEGALSEAGPFIEGGDVLVLG KTIFVGYSGLASNLAGIQWLTNMIGHFGYEVVPVRLHPHILHLDCALSLLRDGLMIVCEE AFLDGLPAQLANWEKIHVTLQEAAYLVTNGLPLNEETYVTDQSFTTLIPQIEEKGIKVEA IDYHVSRMLGGSFRCTTQALIRE >gi|237663579|gb|GG668939.1| GENE 4 5318 - 6010 1062 230 aa, chain + ## HITS:1 COG:no KEGG:EF2970 NR:ns ## KEGG: EF2970 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 230 1 229 229 281 92.0 2e-74 MKKKTLVTLFAGTAILGASIAPAAAHATTTGTTPANVEMTSGSLPPDGTGDGDGDTQDPD PANPNTNFDLLYVPTEFKFAATEVSSDLSAISLDAKGTQTKRYAVGDVRGTQAGWSVTAG VAEMKNGTATLEGSITFTQTGAVAKYNETAKTYSRDVAAFAADPGSPEFAGTTIPVGGAA VSIATAAVGKGQGTWDSELSNVKLNITTPSSQITNGAYTGNVTWTLVAAP >gi|237663579|gb|GG668939.1| GENE 5 6098 - 7231 1192 377 aa, chain + ## HITS:1 COG:no KEGG:EF2969 NR:ns ## KEGG: EF2969 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 377 1 377 377 686 97.0 0 MKTMRWLIVTVFICVMALSIPSAVQAEEADDNMNTKFTVKPNIPENQAKNTQSYYDLIVK PGQKQEVELSLINKTNEELTIDLNLANATTNDNGLIVYNDFEKKPDASLKVPLTTLIKLP EEHVKVPAKKTVAAKMTVEIPENGFQGLVLGGVYASLAEDEKEEKGKSTGLTSRYGFNVA IALRTSEDTPMYLAETLQLVKLVPTIALGNKSVQAVIQNPTSAIFPEVRLEGKVTKKGET KEYAKRILPSVRFAPNSTMNFHLDFGKEDVRPGTYIFEGKAVLKEDEQQVWPFKQEFTIS SQEAKKLNKEAVVKLVLPTWWNQAFYGLLAATIVSLILAIWRFTQQKAILKQQAYLQQEK QAALKNRQGVRDDDSEK >gi|237663579|gb|GG668939.1| GENE 6 7215 - 7613 225 132 aa, chain + ## HITS:1 COG:no KEGG:EF2968 NR:ns ## KEGG: EF2968 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 11 132 1 122 122 174 83.0 1e-42 MTAKSKGSLLVTLGMLLIIANASLTASSESFAEEAGQTNIGVTLYGGKAPLKTEGDTKST EQPVTNKDKKTSQQQDKVSRKNTAKTNPTIAQTSLPRTGERNSTWLYSLGIACLLVALIS FYYLNKKRKKEK >gi|237663579|gb|GG668939.1| GENE 7 7660 - 7884 242 74 aa, chain + ## HITS:1 COG:no KEGG:EF2967 NR:ns ## KEGG: EF2967 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 74 1 74 74 87 95.0 1e-16 MEITMWIWICAGLAVLCFALFLLFLVSSMNFVHQAKPKQSLVKQSMFSWLLLVMCGGWVA IAILLNIALQTQLT >gi|237663579|gb|GG668939.1| GENE 8 8050 - 10059 1598 669 aa, chain + ## HITS:1 COG:SPy1952_1 KEGG:ns NR:ns ## COG: SPy1952_1 COG3711 # Protein_GI_number: 15675752 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Streptococcus pyogenes M1 GAS # 8 491 12 500 532 184 26.0 5e-46 MNYKISYLLDEYAGQKIALSLAQQITDLSQRELVTQLSTIGGEVQKNTVSIPNLSANEWG KQLFQQRQVIYSETERQALIFLLTYSEIEELSVYHYQNFLDVSKGTILADIKKVRHQLAT ENIALFYERKRGFYLEGDEFRIRRFGKNWLARLLQQKSGTFALFCWLSQHQMSQYAKMRD GIQLAVQEAQLQLVPSRLDEISYFLAFSQKRLGKYETVVWPENQLIQSLRAYPVSRRILS DLVGPVANVETESLFLTICLMTALQGELRDTKLEFLLDISGEIIRKMELLAVVQFEQPRE LLMNVYYHLVPAYFRINYGFYLPNVLIKDIRQSYRSLYHLCEQALAPLEKLTKRSIPSEE IGFFTILFGGEIFGQKNEQRQEKLKALIVCPSGISSSLILQSELRRLFPMIEFKETNAVR EIENVSEKSYDIIFSTVPIETAKKVYLTKPIMSSLEKNQLMHQVQSDWLLPGISMPDVKD ILDALKPYISLKKGVTEAQLYRVLHRKMNKILEKEEDLRPMLSELLTTETVQVLPEVADW RAGITEAAKPLLKNGSITEKYIDAMIQKVESFGPFIHICPDVALPHARPEDGVNQLGMSL LKIQKSVDLLEDPKHEIHLFICLAASDNETHLRALSSLTKILSKKESLHRLVAAETVPEI LSIIQEGEK >gi|237663579|gb|GG668939.1| GENE 9 10061 - 10360 189 99 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984431|ref|ZP_01817719.1| PTS system, IIB component, putative [Streptococcus pneumoniae SP3-BS71] # 1 96 2 93 94 77 40 2e-13 MKIFTVCQSGLGTSFMVQMNIQQILEEVGVDTDNFQIDHTDVGSASGDMADYFFVEKTLQ DALGSIPDEKIIPLNAIIDYDETKEKVLKVLDDNGIAHQ >gi|237663579|gb|GG668939.1| GENE 10 10375 - 11742 1705 455 aa, chain + ## HITS:1 COG:SP2129 KEGG:ns NR:ns ## COG: SP2129 COG3037 # Protein_GI_number: 15901943 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 4 454 1 448 448 419 55.0 1e-117 METLLNLFVSIVSQPAILVSLIALLGLVLQKKKFSDVVQGTLKTFVGFLVLIGGAGLLAN SLTPFAEMFQTALNTQGVVPSNEAVVAIALQQYGTPTALIMLVGMVVNILLARFTRFKYI FLTGQAMMYVSCLTDVILVGAGFSVSLPMILLGGLFEGTLLTVTPALCQPFMKQITGNDK VAMGHTGNIGYAASGFIGKVFGNKEKSTEDIKIPKSFGFLRDSTISIMILMSIVYVILAL LAGTGYVEHELSNGENAIIFSLIQAGTFTAGFVVVLQGVRMVLGEIVPAFQGIAKKLVPN SKPALDVPIIFPYAPNAVLIGFFVSFIVGTISMLAMVGLNTTVIIPGVVGHFFCGAAAGV FGNSTGGRRGAILGAAFNGLLISWLPLFILPVLGDLQLASSTFADTDYLIPGLFLGKLGE AGPSLLVGGIIAFVVVVLLASAVLTMREKKVAEEN >gi|237663579|gb|GG668939.1| GENE 11 11807 - 12781 628 324 aa, chain - ## HITS:1 COG:mlr1247 KEGG:ns NR:ns ## COG: mlr1247 COG0657 # Protein_GI_number: 13471310 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Mesorhizobium loti # 53 322 40 295 317 87 26.0 4e-17 MKKKSIGLLLASAYLFHARSRQKSLKACLFEDSLRLSQIARLERNPKVTKAFYHWQRSLN EQVTLPKHLRHLFPLQEITQFPTMYRMSNSVIAPTKKAVLYLHGGGFTLNLAYSQLDFSY KLIEDLSFATDYFIPVYPLAPNKSFADIYNHCYAAYQEILQHYDPEDVILLGDSAGGTLV LNVLQNLAIDFPERLPKAAVLISPWLDGHLDIPVAKSYQKKDKMIGMNYLQLIAQEIDDT ANHSTLSLNCLSFDYQKFPPLFFVGGTHEVFCPSYHQFLKQLGPRPQDTCRLVPGMQHVF AMKQYLPEGRQARKQIAQFIQEQW >gi|237663579|gb|GG668939.1| GENE 12 12993 - 13988 908 331 aa, chain + ## HITS:1 COG:SA0261 KEGG:ns NR:ns ## COG: SA0261 COG1609 # Protein_GI_number: 15925974 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Staphylococcus aureus N315 # 4 328 2 327 332 265 43.0 1e-70 MTNKKVTIKDVANDSGVSITTVSQILNGNGARFSGKTVEKVLAAKERLNYQPDYFAQRMV MKKSKTIGVIVPDITNPFFAQLIRGIESVLYKENFILMLCNADQDVTREHEYLTELIRRS VDGFVIASSEISNQTINETLRAKKIPFIVLDQKKAEGFSDAVLTDDYRGGQLAAKHLQEQ RHEQVVVVMPPHAPVNIQQRLKGFCSVYTEKVQLIETELSKTGGYQAVPEILKTESTGIF AINDEIAFGLYRGLAEAGKKIPEDYSIIGYDNVDMCEYVSPPLTTIAQPVFQLGQTTATL LLERIHQPAKDWEEQTLPVQLIERFSTAPLK >gi|237663579|gb|GG668939.1| GENE 13 14086 - 14997 1188 303 aa, chain + ## HITS:1 COG:SA0258 KEGG:ns NR:ns ## COG: SA0258 COG0524 # Protein_GI_number: 15925971 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Staphylococcus aureus N315 # 2 300 3 301 304 246 48.0 4e-65 MNAVTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGA VGNDGAGAMMTDLMSQDEINLTGVTTLEKTATGQAFIMVDNAGENSIMIYAGANNAFTPK QVQEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNGRSGIVPA FKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIPYQHEL ADK >gi|237663579|gb|GG668939.1| GENE 14 15013 - 15408 519 131 aa, chain + ## HITS:1 COG:SA0259 KEGG:ns NR:ns ## COG: SA0259 COG1869 # Protein_GI_number: 15925972 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Staphylococcus aureus N315 # 1 131 1 134 134 120 55.0 5e-28 MKKTKVINSDISRVIAQMGHFDKLSIGDAGMPVPRTTEKIDLAVTNGVPSFMEVLNNVLE ELAVQRIYLAEEIKTENPDMLTAIKTRLPETPISFIPHTEMKQELNNCHAFIRTGEMTPY ANILLESNVVF >gi|237663579|gb|GG668939.1| GENE 15 15429 - 16316 983 295 aa, chain + ## HITS:1 COG:SA0260 KEGG:ns NR:ns ## COG: SA0260 COG4975 # Protein_GI_number: 15925973 # Func_class: G Carbohydrate transport and metabolism # Function: Putative glucose uptake permease # Organism: Staphylococcus aureus N315 # 1 295 1 292 293 331 67.0 1e-90 MNATALLIGLGPLLGWGLFPTIASKIGGRPVNQILGTSLGTLIFAAIFSMINGLAFPTGM DLFFSILSGVGWACAQIITFKCFTMIGSSRAMPVTTAFQLLGASLWGVFFLGNWPGATAK LLGAFALVLIMIGAKMTVWSETESAESAGIMKKAVLLLAVGEIGYWAYSAAPQATAIDGM HAFLPQAIGMVIVAVIYSAVVTIKGGETSPFIEAVSYKQIFSGFFFAFAALTYLISAQPD MNGLATGFILSQTSVVLATLTGIWFLGQKKTAKEMTVTIIGLVLILAAATITVMI >gi|237663579|gb|GG668939.1| GENE 16 16336 - 17220 982 294 aa, chain - ## HITS:1 COG:lin0450 KEGG:ns NR:ns ## COG: lin0450 COG0583 # Protein_GI_number: 16799526 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 292 1 291 291 312 53.0 6e-85 MELRVIHYFLAVVQEKTISGAAKQLHVSQPTLSKQLKELEEELGVTLFIRGNRQIQLTPE GEYLAKQGQDILSLANKTVTNLSQNEFINGEITIGGGETKAMSFLANALQQITSQHSADI HLHLYSGNADDVIERLDKGLLDFGLIIEPAPKQKYSYLTLPIVDTWGLITVKDHPLATKN VITAADLKEEPLFISRQAQVPSQLSDWLEASLDQFRIVGTYNLLYNASLMVEAGLGSALS IDGILETKQTNLRFIPLYPALTAKISLIWRKNTVLSTAAALFLEQIKKSIQRPE >gi|237663579|gb|GG668939.1| GENE 17 17328 - 17909 649 193 aa, chain + ## HITS:1 COG:lin0451 KEGG:ns NR:ns ## COG: lin0451 COG0110 # Protein_GI_number: 16799527 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Listeria innocua # 1 189 1 189 189 195 54.0 4e-50 MLTKNLQELIATGSIDKDEPLFQLIHQIQEENSRYLIELNQQAYTHNEVRNLLATIIQDK IDETVTILLPFYTDFGRNIHFGKNIFINRAAMFVDLGGIIIEDNVLIGPRVNLLSVNHPE LPMKRRGVLLAPITIKKFAWLGAGVTVLPGITIGENAIVAANATVTKDVPANAIVAGTPA KIIRWIQEDKEEI >gi|237663579|gb|GG668939.1| GENE 18 17909 - 18646 904 245 aa, chain + ## HITS:1 COG:lin0452 KEGG:ns NR:ns ## COG: lin0452 COG4221 # Protein_GI_number: 16799528 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Listeria innocua # 3 243 2 246 248 209 49.0 4e-54 MKSLSEKVIIIMGASSGIGEATARLLARKGAKLVIAARRQERLIAIKKELPEATILVQQA DVTKEEEVQRVIKLTMEKYGRIDVLFNNAGVMPTAPLIEAPKGEWRQMLDINIMGVLNGI AAVLPIMVEQKSGQIIATDSVAGHVVYPDSAVYCGTKFAVRAIMEGLRQEQRENNIKSTI ISPGAVQTELYQTISNRVVAETLHLEQLSWGLKAEDIAQAVVFAIDTPDRMSISEMVVRP TTQTI >gi|237663579|gb|GG668939.1| GENE 19 18687 - 18755 72 22 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIVRFLQNLEFDIYLFVGLLYD >gi|237663579|gb|GG668939.1| GENE 20 18828 - 20141 1492 437 aa, chain + ## HITS:1 COG:BH0608 KEGG:ns NR:ns ## COG: BH0608 COG2252 # Protein_GI_number: 15613171 # Func_class: R General function prediction only # Function: Permeases # Organism: Bacillus halodurans # 5 435 1 433 434 416 59.0 1e-116 MKEKISSYFELEQLNTNMKREMLAGFTTFISMAYILFVNPTVLGASGMDEGAVFTATALA SALGCILMGVLAKYPIATAPALGINAFFAYSVSVGMGIPWQTTLAGVFVASLIFILITIF KLRELIIDAIPADLKFAISGGIGLFIAFLGLSQGGLIVANDATLVGLGPLNVGSTWVTIV GLVVTAILLVRRVPGGIFIGMAISTIVGLATGVIPMPDKIISSAPSLEPTFLVALGHVKD INTIQMWVVVLTFLLVTFFDTAGTLVGLANQAGFMKDNKMPRVGKALAADSTAMLAGSLL GTSPVGAYVESSAGIAVGGRSGITAITTGILFIFSLLFSPLLAVVTSQVTAPALIIVGVL MAQSLSKIKWNEMEIAIPSFLILLGMPLTYSISDGIALGFIFYPITMIAAKRGKEVSPIM YGLFFVFVGFMWILNAQ >gi|237663579|gb|GG668939.1| GENE 21 20301 - 21515 1472 404 aa, chain + ## HITS:1 COG:SP0881 KEGG:ns NR:ns ## COG: SP0881 COG0301 # Protein_GI_number: 15900764 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Streptococcus pneumoniae TIGR4 # 1 404 1 404 404 537 66.0 1e-152 MKYTEIMVRYGELSTKGKNRKTFIMQLAQNVKRALADFPALKIHADRDRMHILLNGEDSE EVIPKLSKVFGIQNFSPSIRIEKEMPAIRAMVQEVVREVYTPGKTFKITAKRSDHSFELD SNGLNQELGGAVIEAIPEIQVQMKKPDINLRIEIRKDAAYLSYETIRGAGGLPVGTSGRG MLMLSGGIDSPVAGYLAMKRGVEVEAVHFASPPYTSEQALQKAKDLAEKLVPYVGTIQFI EVPFTEIQEEIKRVVPQGYLMTITRRLMLRLTDAIREMRKGLVIINGESLGQVASQTLQS MVAINEVTSTPIIRPVVSMDKTEIIEIAEKIDTFELAIQPFEDCCTIFAPPQPKTRPRLD KAQDYEARLDLEGLMARALEGLKITEISAETAKDKQEDEFADFL >gi|237663579|gb|GG668939.1| GENE 22 21645 - 22292 613 215 aa, chain + ## HITS:1 COG:lin2178 KEGG:ns NR:ns ## COG: lin2178 COG2344 # Protein_GI_number: 16801243 # Func_class: R General function prediction only # Function: AT-rich DNA-binding protein # Organism: Listeria innocua # 4 207 7 210 215 219 52.0 3e-57 MEKKMPKATAKRLPVYLRYLKMLGDSGVKRIKSREFSEMIQIPSATIRRDFSHVGELGRS GYGYDVPYLIEVFSNILNTQEEKRIALIGCGNLGKALLKNNFRRNENLNIVCAFDNDSAL VGTTINGLLVHDMSELEAFVRQEGVTVAISTVPSHHAQKAIDKIVQAGVTAILNFAPDRV SVPANVSVQYIDLTTELQTLIYFNETFSLANSPKQ >gi|237663579|gb|GG668939.1| GENE 23 22356 - 22844 734 162 aa, chain + ## HITS:1 COG:L101699 KEGG:ns NR:ns ## COG: L101699 COG2077 # Protein_GI_number: 15672286 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Lactococcus lactis # 1 160 3 160 160 145 49.0 3e-35 MNVTRKGHVLELTGEQPEVGTKAPVFSLKNLNNQEINLADYKGKTVLISVVPDIDTRVCS LQTKRFNQEAAKLDGVQIITISNNTVEEQANWCAAEGVEMEMLHDTEDSFGAAYGLYIPE MGRLARAIFVIDPEGTLVYEEIVSEVSSEPDYQQALEAAKKV >gi|237663579|gb|GG668939.1| GENE 24 23236 - 25878 2930 880 aa, chain + ## HITS:1 COG:SPy1568 KEGG:ns NR:ns ## COG: SPy1568 COG0525 # Protein_GI_number: 15675460 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 7 880 4 880 882 1315 72.0 0 MSEEKNLPTKYQPTEIEAGRYQKWLDQDLFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAW DTTLQDMIIRQKRMQGFDTLWLPGMDHAGIATQAKVEEKLAQQGVSRYDLGREKFVDQVW EWKEEYASHIREQWAKMGLSLDYSRERFTLDEGLSEAVRKVFVSLYEKDLIYRGEYIINW DPKAKTALSDIEVIHKDIEGAFYHMSYPLSDGSGVVEIATTRPETMLGDTAIAVHPEDER YQELIGKTVVLPLVDKEIPIIADDYVDMEFGTGVVKITPAHDPNDFEVGNRHDLPRVNVM NEDGTMNELAGKYEGMDRFAARKAIVSDLKELGRLIKIETMNHSVGHSERTGVVVEPRLS TQWFVKMGPLAEKAMKNQETEDAVEFYPPRFNQTFLRWMENVHDWVISRQLWWGHQIPAW YHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQRYFPTST LVTGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE KYGADALRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNASRFVIMNVEGMTAADIDFS GEKTVADRWILTRLNETVARVTELFDRFEFGEAGRQLYNFIWDDFCDWYIEMSKEILYGD NEVAKQTTRSILVYTLDQILRLLHPIMPFVTEEIWEKIPHQGESLVVAEYPVVHEEFNDE AAARGMEVLKEVIRSVRNIRAEVNTPLSKPITLLIKTNDTEVEEFLTANTSYLERFCNPE ELVISREIEAPELAMSAVLTGAELFLPLAGLINIEEEIARLEKELDKWTKEVKRVQGKLS NERFVSNAPDEVVEAERAKEKDYLEKQEAVKERIAQLRSI >gi|237663579|gb|GG668939.1| GENE 25 25925 - 26524 426 199 aa, chain - ## HITS:1 COG:SP1720 KEGG:ns NR:ns ## COG: SP1720 COG0398 # Protein_GI_number: 15901553 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 7 199 13 204 205 126 36.0 3e-29 MTNQKKFLNGLIRWLPLVGLVLFFGLILWGYSRGIFHSVASLQAFIKQFGNYAVLCFILL QIVQVIIPILPGGISSVAGMLMFGNLQGLLYSYLGLIIGEFIGFLLVRYYGRSFVKIILS PNKYKKFEEILDKNEHNVKKLLIFTMLVPFAPDDIVCLVAGITDISLKEFMKIVLLLKFW SVATYSYLMLYLFQLFGKL >gi|237663579|gb|GG668939.1| GENE 26 26517 - 29081 2263 854 aa, chain - ## HITS:1 COG:SP2231 KEGG:ns NR:ns ## COG: SP2231 COG4485 # Protein_GI_number: 15902035 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 12 851 14 850 850 209 26.0 2e-53 MKNKSKLLWLGSFFLPFLLLLLVWMTLQLAPFGDNNLLVSDLGTQYMPFLSFLKRSFHEG ITTFYSFSNEIGESIVPLAAYYLLSPFNVLAFFFPYEQLPIAILWIITLKLALMGTTMFS YLKYTYQKVDGTTLLFSTSYSFCGFVTVYSQNFMWLDALILFPLILLGLQRLWDQRKWGL YSITLFLAIVTNYYMGYMICLFAVLYSIYWFFKKNTQAHAIRQFFKQSPLFILVSFLTGT ATSFLLLPAAEGMLYTKKADFDVSTFFLTPKFNTSFFSQLGLGSINYELRLDHLPTVFAG LFVTLLCVAYFQTKQIALKERIASAILLFILFLSFWLEAFNTVWHMFQSPAGFPYRNVFI FSFLLIVFAYEAWLKRVTIPWSAPIIFSLLLVIGYGSLYYGPQKNLLISINYLWLSLLFI WLIFVCLRLAHKKALRNYVVVALFLLVSTELTTNFWISFKHMPFGSQATFAQDYRKHSQL IDEKMASAPELYRMKQVIPSKETGFREINNGYNNPLLYGYAGVSSYTSTLTATTQDTLSA LGLYRKNDRRIAYVDNSQLTNLLLNVKYDFLPIEKPTSEKLLKTVGSTKIMENDEAIGIG FLAPTALTKLKLAKNNPLDAQEELLQTLVPTDKPYFKTASLINEPHHTNETIEATFKVNS TGDLHLYIPNLKWKKVTQLKVNQQVISTPIYIATNQLFNLGHFEKGTTVTLSLTAEQVVD LTNWQLQTLDQTAFNLAVDKLRQQALHVNATKKGHLNGALNAPGNDTQLLYTSIPYDQDW QVKSSLQKEPLKTQRILGGFLAVEVPAGKQQLTFAYHPRMIYLGTAVSGTILLGTAGYLG FKKYRRKRQEATHD >gi|237663579|gb|GG668939.1| GENE 27 29330 - 30652 1466 440 aa, chain + ## HITS:1 COG:L0177 KEGG:ns NR:ns ## COG: L0177 COG0285 # Protein_GI_number: 15673139 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Lactococcus lactis # 3 430 1 423 427 446 53.0 1e-125 MQLTIEEAIEWIHSRLPFGSRPGLDRINALLEKIDHPENKVPTIHIAGTNGKGSTVTYLR CLLEEMGLKVGTFTSPYIESFNERIAINGQPISDEQLITYVEKYQPIIKELDQITEVAGI TEFETLTGMALDYFVNEQVDIAVVEVGLGGLLDSTNVVKPLLTGITTIGKDHTEILGETI AEIAYQKAGIIKEKVPVVTGNICADALAVIEKVAQEKQSPIFRFGKEYQVEYLHPDTQWG EVFNFYGEMGKLTKIKVPLLGRHQVENAAVAIQLFDKYCQLQHLPFKERDITQGLAKAKW PARMERLSDEPLIVLDGAHNDHAVKRLVENLRKEFPQHTIHILFSALATKDVDEMIQDLK QVPNAHLYLTSFDYPKAIALTEMEKYEDDLTEIVSLWQFGLGEILEKMSTDDLLLVTGSL YFVSQVRELLLTIGGNDEEI >gi|237663579|gb|GG668939.1| GENE 28 30639 - 31295 651 218 aa, chain + ## HITS:1 COG:CC2096 KEGG:ns NR:ns ## COG: CC2096 COG0637 # Protein_GI_number: 16126335 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Caulobacter vibrioides # 2 218 5 218 221 150 36.0 1e-36 MKKFDGVIFDMDGLLFDTELIYYTSTQKVADAMGLPYSKEVYLDYVGISDEEVQENYRRI YASYGHDTVEEFIRRSYDDTLQEFRSGNVPLKPGVVEFLDFLDDQKIPRLVASSNVRPAI EMLLSHAGIQDRFVGIVSAEDVKRAKPDPEIFQKARQLLGTEAPKTLIFEDSFHGVSAAH SAGIPVIMVPDLLQPTEVIQEKTLHVLESLHQAPHYLK >gi|237663579|gb|GG668939.1| GENE 29 31352 - 32050 686 232 aa, chain + ## HITS:1 COG:BS_ysxA KEGG:ns NR:ns ## COG: BS_ysxA COG2003 # Protein_GI_number: 16079856 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Bacillus subtilis # 6 229 8 231 231 230 47.0 2e-60 MQVSDLFIREMPSDCLPRERLLAIGEKALSNQELLAILLRTGSKEADVMTVAATLLKQFK QLSYLQQATLNELMAIKGIGQVKAIELRAAIELGCRIYQSSQIKFGKVTSSQQVAQRLLQ EMKGLQQEHLICIYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNH PSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENFFASE >gi|237663579|gb|GG668939.1| GENE 30 32204 - 32404 380 66 aa, chain + ## HITS:1 COG:lin1401 KEGG:ns NR:ns ## COG: lin1401 COG1278 # Protein_GI_number: 16800469 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Listeria innocua # 1 65 1 65 66 97 84.0 4e-21 MEQGTVKWFNAEKGFGFISREDGSDVFVHFSAIQGDGFKTLEEGQAVTFDVEDSDRGPQA VNVEKN >gi|237663579|gb|GG668939.1| GENE 31 32510 - 34195 1644 561 aa, chain - ## HITS:1 COG:SPy1876 KEGG:ns NR:ns ## COG: SPy1876 COG0595 # Protein_GI_number: 15675695 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Streptococcus pyogenes M1 GAS # 3 555 4 556 560 863 74.0 0 MKVNIKNNETGVFAIGGLGEIGKNTYGVQFQDEIIIIDAGIKFPEDDLLGIDYVIPDYSY IVQNLHKVKALVITHGHEDHIGGVPYLLRQANIPIYAGPLALALITNKLDEHGLLREAEL HEINEDTVIRFRKTAISFFRTTHSIPDALGVVVKTPSGNIVATGDFKFDFTPVGEPANLH RMAKLGEEGVLCLLSDSTNAEIPTFTKSEKTIGTSILKIFEKIDGRIIFASFASNIFRLQ QAADAAVKTGRKIAVFGRSMENAIVNGERLGYIKVPKGTFVDAAELNQLPANETMILCTG SQGEPMAALSRIANGTHRQISIQPGDTVVFSSSPIPGNTTSVNRLINLLSEAGAEVIHGK INNIHTSGHGGQEEQKLMLRLMKPKYFMPVHGEFRMLKIHASLAQDTGVPEENCFIMGNG DVLALTADSARPAGHFNANDVYVDGNGVGDIGNVVLRDRRILSEEGLVLAVATVDIKNKE IMAGPDILSRGFVYMRESGDMIHEGQRLLFNALREAMKDKNCTEAKLGEAMTTALQPFLF EQTERHPMILPMIMTATVSDQ >gi|237663579|gb|GG668939.1| GENE 32 34197 - 34409 237 70 aa, chain - ## HITS:1 COG:SPy1875 KEGG:ns NR:ns ## COG: SPy1875 COG5503 # Protein_GI_number: 15675694 # Func_class: S Function unknown # Function: Uncharacterized conserved small protein # Organism: Streptococcus pyogenes M1 GAS # 1 70 1 76 76 65 53.0 2e-11 MIYKVYYQETKIRNPKREDTKSLYMEADSDVIVRQLVEENTPYNIEYVQLLDEKHLAYEQ EHADFTLTEF >gi|237663579|gb|GG668939.1| GENE 33 34714 - 35100 415 128 aa, chain - ## HITS:1 COG:SA0161 KEGG:ns NR:ns ## COG: SA0161 COG2832 # Protein_GI_number: 15925870 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 3 92 2 91 127 57 34.0 9e-09 MKKLFFIFLGSCTFALGTLGIFLPLLPTTGFYLLTAFFWMRSSDKLYNKFLASSYYQKYI QEAFFEKKITRKGKWKLFISMFLLFAIPCLIVRNTLMTTTLAIVYLAHVIGLSWYWRPKK KALELDQE >gi|237663579|gb|GG668939.1| GENE 34 35329 - 37056 243 575 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 333 557 132 354 398 98 30 1e-19 MKLMWRYTMRYKKLLFADFICVFGFILIELGLPTILARMIDKGIIPKDMDYIYQQGIWMV VITIIGVAMNILLGYFGARITTNIVRDIRDDLFEKIQTFSHSEYESIGVSSLITRTTNDA YQIMLFMGNILRLGFMTPVMFIASLYMVMRTSPSLGMYVLGALPFLLLAVVGIARLSEPL SKKQQKNLDGINGILRENLSGLRVIRAFVNEKFEESRFNKVNETYTKSSKSLFRLMAAAQ PGFFFLFNIVMVLIIWSGTVQISHGDLEVGNLIAFIEYIFHALFSFMLFASVFMMYPRAA VSASRIQEALDMEPAIREEEGVTETATKGYLEFKNVTFAYPGHAESPVIRNVSFKASPGE TVAFIGSTGSGKSTLIQLIPRFYDVSEGEILIDGVNVKDYQLSALRNKIGYIPQKALLFT GTIADNLRYGKEDATLEEMERAIDIAQATEFVSQKPQGYDEPLSEGGTNFSGGQKQRLAI ARAIIRNPEIYIFDDSFSALDYQTDANLRARLKKETTESTVLIVAQRVGTIMHADRIVVL NEGDVVGIGTHRELLETCPIYYDIAASQLSEEELA >gi|237663579|gb|GG668939.1| GENE 35 37053 - 38819 217 589 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 347 566 132 351 398 88 29 1e-16 MKHAFSSMKRIGRYIKPYRLTFYLVILFTILTVAFNAALPYLTGLPTTEISRNIAAGESI NFDYVIQCLIWILVVGTGYCVAQFLSGFLMTNVVQQSMRDLRRDIEEKINRLPVSYFDKN QQGNILSRVTNDVDAVSNAMQQSFINIVSAVLGIVMAVVMMFLINPLMAVFSVIMIPLSL IISRTIVKISQKYFQGMQNSLGDLNGYVQENMTGFSVLKLYGREKETLEGFKQVNHRLNG FGFKASFISGLMLPLVQMTAYGTYIGVAVLGSYYVVAGVIVVGQLQAFIQYIWQISQPMG NITQLSAALQSASASTMRIFEILDEPEEELNDQDVPLQEPILGSVEFENVSFSYDPEKPL IRNLNFKVDAGQMVAIVGPTGAGKTTLINLLMRFYDVTEGAIKIDGIDTKKMNRSDVRSV FGMVLQDAWLYKGTIADNIRFGKLDATDYEVVDAAKTANVDHFIRTMPDGYEMEINSEGD NVSLGQKQLLTIARAVISDPKILILDEATSSVDTRLEALIQKAMDRVMEGRTSFVIAHRL STIREADLILVMKQGEIIEKGTHHELLEQGGFYEKLYNSQFAEEGDYEE >gi|237663579|gb|GG668939.1| GENE 36 39256 - 39747 393 163 aa, chain + ## HITS:1 COG:CC2643 KEGG:ns NR:ns ## COG: CC2643 COG0663 # Protein_GI_number: 16126878 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Caulobacter vibrioides # 4 154 18 168 176 162 52.0 3e-40 MKKEYFIAASADVYGNVQLAKDSNIWFQSVLRGDSNTITIGEGSNIQDGTIIHVDEDAPT IVGKYVTVGHQCMLHGCKIGDGALIGMGSTILNNAIIGENSLIGAGSLVTEGKIIPPNVL AFGRPAKVIRPLTATEIASNHTNALHYVQRAEEFRQQKYPKLT >gi|237663579|gb|GG668939.1| GENE 37 39764 - 40912 1291 382 aa, chain + ## HITS:1 COG:BS_yvyH KEGG:ns NR:ns ## COG: BS_yvyH COG0381 # Protein_GI_number: 16080619 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Bacillus subtilis # 1 382 1 380 380 463 63.0 1e-130 MKKIKVMTVFGTRPEAIKMAPLIKVLEEQSEGFDSVVVVTAQHRQMLDQVLEDFQITPNH DLNIMKDGQTLTDITSRVLNLLTEVLVTEQPDIVLVHGDTTTSFAAALAAFYQQIPVGHV EAGLRTWQKYSPFPEEMNRQLVDVLTDIYFAPTTQSKGNLIKENHPEEHIYVTGNTAIDA MAYTVDAHYQNDLLEKIPTDQRIVLITMHRRENLGLPMANVFKAVRRLVMEHPEIEVIFP MHKNPKVREIVAEHLGELARVHLIEPLDVKDFQNFAAKSSLILTDSGGVQEEAPSLGVPV LVLRDTTERPEGVAAGTLKLVGTDEQVVYQEAKTLLTDSDAYHAMAHAQNPYGDGQASHR IVEAIAYEMQQSDKKPDTFTAK >gi|237663579|gb|GG668939.1| GENE 38 41009 - 41662 741 217 aa, chain + ## HITS:1 COG:CAC0418 KEGG:ns NR:ns ## COG: CAC0418 COG0546 # Protein_GI_number: 15893709 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Clostridium acetobutylicum # 1 215 1 214 216 186 45.0 4e-47 MYQTILFDLDGTITDSGSGIMRSILYATEQLGWPAPSEETLRSFIGPPLYESFLHMAPSA EAAQQAVSHYRAYYQRKGMFENHVYPGIQEVLTRLKEAGAKLYIATSKPEEFAKKIITHF DLDRYFTGIYGASMDGHRSKKADVIQYALTEAQLDPTKEAIIMVGDRNHDILGAQQNGLD SIGVLYGFGEETELQEAGATFLVQSPKDLGAILLQNS >gi|237663579|gb|GG668939.1| GENE 39 41870 - 43255 1310 461 aa, chain + ## HITS:1 COG:SPy0348 KEGG:ns NR:ns ## COG: SPy0348 COG1559 # Protein_GI_number: 15674503 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Streptococcus pyogenes M1 GAS # 48 457 102 521 524 316 43.0 5e-86 MANDNQNNQDPKSSLRDQVTGSLKGRNDGDQPDSSEKNDRSPQPSSDESQETASRTTQTR AGSRAARRRGKDKTTQTVEEPTPIETDEKPTNTKKQTRKKEDRLVGRIVLIVVSVLVLMM AIFGFTFYKYVDAGLQPLDKNNKKLVQVHIPEGSSNKQIAAVLEESNVIKSGMVFNYYVK FKNLTDFQAGYYQMSPSMTLDEIGEMLKEGGTPEPTKIADGKVTIPEGYDIDKIGEAIEK NTDFKKADFIALMKNEDFFNQMKAKYPDLLESAATAEGVRYRLEGYLFPATYDYYKKATL PEFVEQMVAKMNTVMEQYTPTIHAKNLTNQQVLTLASLVEKEGVKEADRKQIAQVFFNRL AADMPIQSDISILYALGEHKETVTYADLEVDSSYNLYKNTGYGPGPLDSPSEESIKAVLN PTPSDYLYFVADISTGKVYFSKTYEEHQVLVDQYVNNSSSE >gi|237663579|gb|GG668939.1| GENE 40 43516 - 43995 741 159 aa, chain + ## HITS:1 COG:lin1531 KEGG:ns NR:ns ## COG: lin1531 COG0782 # Protein_GI_number: 16800599 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Listeria innocua # 3 159 4 160 160 196 73.0 1e-50 MVEKVYPMTLEGKEKLEQELEELKTIKRKEIVERIKIARSFGDLSENSEYESAKDEQAFV EGRITTLENMIRFAEIIDNDGVDQDEVSIGKTVTFQELPDGEEEEYTIVGSAEADPFSGK ISNDSPIAQALIGKQLGDQVIIATPGGDMTVKITKVEAN >gi|237663579|gb|GG668939.1| GENE 41 44146 - 44877 731 243 aa, chain + ## HITS:1 COG:lin1019 KEGG:ns NR:ns ## COG: lin1019 COG4758 # Protein_GI_number: 16800088 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 29 243 30 237 237 145 38.0 5e-35 MNNPWRFFIVAEALLFILALWQIVHNPGLAVLLTIGVLLVAYVSRKASKTHFNNFQFVLG VVFIVIGAMNSTAVWFMLIFGVLFIGLKGFEISGVDIAERAPWRKKQMIMVETAAKEPKN GKRFKRRWFANERIGNNIYEWDDINIDLISGDTIIDLGNTLLPKEDNIIIIRKGFGRTRI LVPLGVAILLEHSTFYGTVRFEEEKYQLKNESLKIYSNDYDTNLRRLKIMTNTLVGDVEV IRV >gi|237663579|gb|GG668939.1| GENE 42 44874 - 45977 839 367 aa, chain + ## HITS:1 COG:lin1020 KEGG:ns NR:ns ## COG: lin1020 COG4585 # Protein_GI_number: 16800089 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Listeria innocua # 6 362 4 352 352 291 50.0 2e-78 MTDRISRRMISLYASLSTFIVILITLFSYFHSIKQNRWLLELLQRKVFYLPLIVHIVLIS LLIGLLTFLLISLVQKGQYGRIEEKLRLLANGNYESPVLNKPTTSENQDHYLTEVEQDIW SIKNKLLEMSKELQLLNSRPQLMDGQTKEEILENERHRLARELHDSVSQQLFAAMMMLSA LNEQAQRTETPEPYRKQLAMVAEIINASQSEMRALLLHLRPISLEGKSLRKGIEQLLKEL QTKIKIELIWDVEDVHLNSSIEDHLFRIVQELLSNTLRHAKAKELEVYLHQVDKNVLLRI VDDGVGFDMKEQSNKAGSYGLNNIRERVVGMGGTVKIISFKGQGTSVEIKVPVIKEETAS DQSNVSG >gi|237663579|gb|GG668939.1| GENE 43 45952 - 46584 817 210 aa, chain + ## HITS:1 COG:lin1021 KEGG:ns NR:ns ## COG: lin1021 COG2197 # Protein_GI_number: 16800090 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Listeria innocua # 1 210 1 210 212 299 79.0 3e-81 MIKVMLVDDHEMVRLGVSSYLSIQEDIEVVGEAENGKIGYEKALELRPDVILMDLVMEEM DGIDSTKAILKDWPEAKIIIVTSFIDDEKVYPAIEAGAAGYLLKTSTAHEIADAIRATYR GERVLEPEVTHKMMERLTKKQEPVLHEDLTNREHEILMLIAQGKSNQEIADELFITLKTV KTHVSNILAKLDVDDRTQAAIYAFQHGLAK >gi|237663579|gb|GG668939.1| GENE 44 46688 - 47344 837 218 aa, chain + ## HITS:1 COG:lin1022 KEGG:ns NR:ns ## COG: lin1022 COG0569 # Protein_GI_number: 16800091 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Listeria innocua # 1 218 1 217 219 268 62.0 4e-72 MKQNFAIIGLGRFGGSICQTLVEAGQEVLAIDSSEDRVNEYMNIATHAVVANAQDEMTLR SLGIRNFDHVVVAIGEDIQASILVTLMVKEMGVPNVLAKAVNEYHARVLDKIGADMVVHP ERDMGIRIAHKLVSRNILDYIELSSEFSLAEVRVTNPKFYNKTLAELNFRQRFGLTVVAI RRSKTEVIASPDASEIVRENDNLLVIGDTADVDLLDEK >gi|237663579|gb|GG668939.1| GENE 45 47425 - 47736 545 103 aa, chain + ## HITS:1 COG:BS_yneR KEGG:ns NR:ns ## COG: BS_yneR COG4841 # Protein_GI_number: 16078867 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 95 1 95 95 76 37.0 1e-14 MKLEVTPKAQQWFKEETGVQPETGIRFFGKIYGKTPVHDGFSIAMSVEAPDEPMIKENLD GITYFIEETDDWFFKGYDLIVDYDEKNDEPRYQFEANQEDLTK >gi|237663579|gb|GG668939.1| GENE 46 47940 - 48878 1017 312 aa, chain + ## HITS:1 COG:SPy0510 KEGG:ns NR:ns ## COG: SPy0510 COG0463 # Protein_GI_number: 15674614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pyogenes M1 GAS # 1 305 3 306 308 379 59.0 1e-105 MLSIVVPCYNEEAAIPLFFEEVEKISQQLSHSVEYIFVNDGSKDKTLAVLRQLYREHPEK VRYLSFSRNFGKEAGLYAGLKEATGDLVTVMDVDLQDPPELLPQMIEMIETSTDLDCVGT RRITRDGEPPIRSFFARMFYKLINRIAETEMVDGARDFRVMTRQMVDAILELSEYNRFSK GIFSWVGFKTEYIEFKNRERIAGETSWSFWSLLSYSIDGIVNFSETPLNIASYVGAFSCI GSALAMLVIIFRTLVNGDPTSGWPSMVCIVLFVGGLQLLCLGIIGKYIGKIFLETKKRPI YIVKESEKDSKK >gi|237663579|gb|GG668939.1| GENE 47 49088 - 50158 1081 356 aa, chain + ## HITS:1 COG:PH0022 KEGG:ns NR:ns ## COG: PH0022 COG3839 # Protein_GI_number: 14589983 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Pyrococcus horikoshii # 1 354 10 370 373 261 41.0 1e-69 MIEVIDLKKVFDNGFEALKSVNFTIEQGDLVCLLGPSGCGKSTILNLIAGLLHPSDGDIQ FRQQSVVKTAPKDRNIGFVFQNYALYPHMTVLENVMFPLTVGSKKVPKAEAQAIAEEYMK LTNIEELSHKKPGTLSGGQQQRVAITRALVQKPDVLLLDEPLSNLDARLRLKIREEIRRL VKEVGITTIFVTHDQEEALSISDKIILLNEGVIQQNDEPQNLYLEPNNLFVAQFIGNPII NLLSVEVKDGKMYHESFEIPLERFEQARFKMPMTDGKYTFASRPEDVVPAETGLFTTTTD LVELIGRERILRFTLGNEQVKSIISVEEAIEEGDTLSFDFSYKKVFIFNEAGDRVY >gi|237663579|gb|GG668939.1| GENE 48 50158 - 51033 778 291 aa, chain + ## HITS:1 COG:TM0596 KEGG:ns NR:ns ## COG: TM0596 COG1175 # Protein_GI_number: 15643362 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Thermotoga maritima # 45 288 169 414 420 173 42.0 3e-43 MKKYNPENQPKAWLFLLPSLGIILLFSVYPLFRSLWMSFQKGSLINQRYAGLENYQRVLN DPIFYKALKNTALYAFAVVPIALIISLAIAWIIFEKVKHKSFFETIFFMPYVTSTIAIGI VFRYFFNGDYGIVNYVLGFFGIPSVNWLDNVQMSMPTLIIFGVWTSLAFNIIILLAGLRN IDEEHFKIAKMFGASDGEIFRRITFPQLVPTIAFLLTVNLIGAFKVYTQVYALFGGHAGI ANSATTAVYYIYDKFHIAGRPGIAMAATVILFVIILVVTFLQNKLLKKVGQ >gi|237663579|gb|GG668939.1| GENE 49 51038 - 51856 726 272 aa, chain + ## HITS:1 COG:TM0598 KEGG:ns NR:ns ## COG: TM0598 COG0395 # Protein_GI_number: 15643364 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Thermotoga maritima # 52 271 58 277 277 178 42.0 1e-44 MKKVLTIIAFVFLGILAVITLFPFVYMILAGLMSYSEATSMPPTMFPKQPQWQNYTEVFQ KAPFLRYFLNTVFVSGVTTIATVVTAVLASFALTSLKFRFKNVVIALMISLLMVPYESII FTNYQTIAQLGLLNTYSALIIPFLTSIFYIYYLNGYLKGIPDTFYKAAKIDGASDLEYIW RILVPMSKPALVTVGILTFISSWNSFLWPLLVTNEKKYRLLNNGLSAFATESGSDVHLQM AAATLTVIPILIIYLIFRKEIIRGVAKNGIKG >gi|237663579|gb|GG668939.1| GENE 50 51840 - 53129 1353 429 aa, chain + ## HITS:1 COG:PH0466 KEGG:ns NR:ns ## COG: PH0466 COG0595 # Protein_GI_number: 14590378 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Pyrococcus horikoshii # 9 425 4 510 514 99 26.0 1e-20 MESKAKTTVTFHSGILTIGGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLINNRLV PELKDLYDPRLGYEYHGAEDKEYQHTAVFLSHAHLDHSRMINYLDPAVPLYTLKETKMIL NSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTP DHFITYTGDLRLHGHNREETLAFCEKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDL VQHLVRLELENPNRQITFNGYPANVERFAKIIEKSPRTVVLEANMAALLLEVFGIEVRYY YAESGKIPELNPALEIPYDTLLKDKTDYLWQVVNQFDNLQEGSLYIHSDAQPLGDFDPQY RVFLDLLAKKDITFVRLACSGHAIPEDLDKIIALIEPQVLVPIHTLKPEKLENPYGERIL PERGEQIVL >gi|237663579|gb|GG668939.1| GENE 51 53153 - 54433 1609 426 aa, chain + ## HITS:1 COG:TM0595 KEGG:ns NR:ns ## COG: TM0595 COG1653 # Protein_GI_number: 15643361 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Thermotoga maritima # 44 403 22 389 419 176 31.0 6e-44 MKFKTLATTVLATAAIFALGACGNGNGAKESNDIVKEVKEDTTITFWHAMNGVQEEALTK LTKDFMKENPKIKVELQNQSAYPDLQAKINSTLTSPKDLPTITQAYPGWLWNAAQDEMLV DLKPYMDDDTIGWKDAEPIREVLLDGAKIDGKQYGIPFNKSTEMLFYNADLLKEYGVEVP KTLEELKEASKTIYEKSNKEVVGAGFDSLNNYYAIGMKNKGVDFNKDLDLTSKDSQEVVD YYRDGIEVGYFRTAGSDKYLSGPFANKKVAMFVGSIAGAGFVQKDAEAGGYEYGVAPRPE KINLQQGTDIYMFDSATPEQRTAAFEFMKFLATPDSQLYWAQQTGYMPILESVLHSDEYK NSKTTKVPAQLENAVKDLFAIPVEENADSAYNEMRTIMESIFASSNKDTKKLLKDATSQF EQAWNQ >gi|237663579|gb|GG668939.1| GENE 52 54531 - 56084 1660 517 aa, chain + ## HITS:1 COG:L99798 KEGG:ns NR:ns ## COG: L99798 COG0737 # Protein_GI_number: 15672285 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Lactococcus lactis # 1 516 1 518 519 617 56.0 1e-176 MQIKILATSDMHGYIMPTSYSEKKMDLPFGTAKAATMLKKLRASAKGPVFQIENGDFIQG SPLSYYVRKAETHSVAAITKIINQMNYDVSILGNHEFNYGLDYLKETIASYQQPVLAANI LGKDGQPYFGQPYVIIEKQGVKVAILGVTTQYIPHWEQPATVKDLTFKSVVETAAEYVPK LREEADLVVVAYHGGFEKDLETGEPTELLTGENEGYDLLEKVPGIDALVTGHQHREIATK LNGIPVIQPGFRGAFVGEITLEIEPMAKGYRVIGSDAAIHPVGNEQPDAEILALTTALHD EVEEWLDQPVGNVEGDMTIQNPNAVRLKEHPYIEFINNVQMASSGTDISGTALFNNEGKG FNNQITMRDIITNYIYPNTLAVLRVTGQDLREALEQSATYFVLEKGQPIFNPKYVDPKPQ YYNYDMYEGIEYTLDLRQPFGERVTKLNYHGKAVQAEDVLEIVTNQYRAVGGGNYQMFQP EKIIREIQIDMTELIAEYLKKHPIIQASTNDNFKVIW >gi|237663579|gb|GG668939.1| GENE 53 56148 - 57110 958 320 aa, chain - ## HITS:1 COG:BH0949 KEGG:ns NR:ns ## COG: BH0949 COG0111 # Protein_GI_number: 15613512 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Bacillus halodurans # 34 320 33 316 316 196 33.0 3e-50 MNQPIIYLNEVFNEEQLEQVKAVAPNYLVKTSTDYLSSAEEEAIEIMLGWHKEIGPRLLA SDTSHLKWIQLISAGADYMDFDKLREKGILLSNGSGIHSVSISEHVLGVLLAHTRGLQES IQQQMQHTWNQTAPSYQQLSGQKMLIVGTGQIGQQLAKFAKGLNLQVYGVNTSGHVTEGF IECYSQKNMSKIIHEMSIVVNILPLTETTKHLYNQALFEKMAPETIFVNVGRGASVATND LITALNNKTIAFAALDVFEEEPLPEDSPLWEMQNVLLTPHISGMTPKFKSKLLAIFIPNL NQFVTDQTLVKNQVSLKKGY >gi|237663579|gb|GG668939.1| GENE 54 57259 - 58269 977 336 aa, chain - ## HITS:1 COG:lin2489 KEGG:ns NR:ns ## COG: lin2489 COG0492 # Protein_GI_number: 16801551 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin reductase # Organism: Listeria innocua # 1 331 1 331 331 444 61.0 1e-125 MSDEKDIYDLTIIGGGPVGLFAAFYAGIRKAKTKIIDSLPQLGGQLTMLYPEKYIYDIPG FPAIKAGELIANLEKQMQPFQHDVCLEEEVTHLAQEADGLLRLDTTKDTHYSKTVIFAIG NGAFQPRRLAIENVEAFEGESIHYYVTDMKKFAGKKVAIAGGGDSAIDWALMLENVAEEV SIIHRRPQFRGHEHSVEQLEKSSVSIRTPYIISDILKENETFTGIQLTETKGDQTLDLPL DDLIINYGFTSSLTHLKEWGLDVSRNAINVHSDMSTNIPGVYAVGDICSYEGKVKLIATG FGEAPTAVNNALHYLRPDTRRQPVHSTSLFENGVPK >gi|237663579|gb|GG668939.1| GENE 55 58474 - 59064 869 196 aa, chain + ## HITS:1 COG:lin2475 KEGG:ns NR:ns ## COG: lin2475 COG0652 # Protein_GI_number: 16801537 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Listeria innocua # 4 193 3 193 194 256 68.0 1e-68 MSQFPQLDLENAKGPKAVIKTNRGDITVQLFPEQAPKTVENFVELAKKGYYDGVIFHRVI PDFMIQGGDPTGTGMGGESIYGEAFEDEFSRDVFNLRGALSMANAGPNTNGSQFFVVTNQ NVPAQMMSQLEDAGFPEEIIEAYKQGGTPWLDFRHTVFGHVVDGMDVVDEIGGVQRDAQD RPTFDVVMDTVEIIGE >gi|237663579|gb|GG668939.1| GENE 56 59228 - 59434 234 68 aa, chain + ## HITS:1 COG:no KEGG:EF2896 NR:ns ## KEGG: EF2896 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 68 1 68 68 118 100.0 9e-26 MLEKYRYPMALALFAVILPFIGTFFTYVDQQGIVHEPGFYTIIIGEILLLFSGIWFVRVY LAKRKRKN >gi|237663579|gb|GG668939.1| GENE 57 59468 - 60634 1144 388 aa, chain - ## HITS:1 COG:BS_patB KEGG:ns NR:ns ## COG: BS_patB COG1168 # Protein_GI_number: 16080196 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Bacillus subtilis # 3 388 2 387 387 353 42.0 2e-97 MFNFNETIDRRHTNCVKWDTVETSYHEKDLLPLWVADMDFKVHQPILDALSQVIEQGILG YAVAPNELYQAIQDWQQQHHQLIVEKEEILFNSGVVPSLATAVQAYTAPADSIMICDPVY PPFADVVKQNERRLVRHSLLEVNGHYEVDLVKMEQQIIEEKVKLLLFCNPHNPGGRVWTK EELLAIGRLCKKHQVTVVSDEIHQDLIFKPHTFTSFTVADEAFKEFTVTLTAATKTFNLA GIKNSMLFIPNEKLRQSFVSLQDKNHQGGINTFGYVGTAAAYQTGEEWLTALLDYLKENI DFALSFFREEMPSVRVMEPEGTYLLWLDFSSYSLTDRELRDTLIHKGKVVLNPGISFGPQ GSQHMRLNLACSRETLEEGLLRIKKAFN >gi|237663579|gb|GG668939.1| GENE 58 60800 - 61186 187 128 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|86608329|ref|YP_477091.1| putative ribosomal protein S1 [Synechococcus sp. JA-2-3B'a(2-13)] # 1 106 186 291 304 76 34 3e-13 MKRGNLMKYKIGMVLSGTITGLQPYGAFVSLDEETQGLIHVSEVQAGFTKNIHGLLTVGQ KVTVQVIDVDEYSQKISLSLRTLEDKVHSVNHRRKKYFTDKNKKIGFATLDKELPEWIDE AMDKLLEK >gi|237663579|gb|GG668939.1| GENE 59 61260 - 61622 336 120 aa, chain + ## HITS:1 COG:no KEGG:EF2893 NR:ns ## KEGG: EF2893 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 120 1 120 120 224 100.0 7e-58 MSNKKVAGTIILNLNDGSKKFLMHPIGEAIEFAMAKVSDEMTGLASMLQWFKEEVQLDVT SISLVELTNAHINKENVPLFVFEMDEQALKNEMDKDYTWVAPAELKTIWSKYHIEGVPMF >gi|237663579|gb|GG668939.1| GENE 60 61704 - 61871 93 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|256618321|ref|ZP_05475167.1| ## NR: gi|256618321|ref|ZP_05475167.1| predicted protein [Enterococcus faecalis ATCC 4200] predicted protein [Enterococcus faecalis ATCC 4200] # 4 55 2 53 53 62 96.0 9e-09 KIFMFGQHFFSKKLKEVFNLFSFFSIISFLNFLNPNCLSKQFNPLLKIEQSESYI Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:31:15 2011 Seq name: gi|237663578|gb|GG668940.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD19, whole genome shotgun sequence Length of sequence - 13476 bp Number of predicted genes - 21, with homology - 20 Number of transcription units - 6, operones - 4 average op.length - 4.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 212 146 ## EF2810 hypothetical protein 2 1 Op 2 . - CDS 212 - 553 498 ## EF2810 hypothetical protein 3 1 Op 3 . - CDS 572 - 1612 1027 ## COG4926 Phage-related protein 4 1 Op 4 . - CDS 1621 - 2682 1017 ## COG4926 Phage-related protein 5 1 Op 5 4/0.000 - CDS 2609 - 3364 569 ## COG4926 Phage-related protein 6 1 Op 6 2/0.000 - CDS 3361 - 4116 306 ## COG4722 Phage-related protein 7 1 Op 7 . - CDS 4085 - 5659 1250 ## COG5412 Phage-related protein - Prom 5715 - 5774 80.4 8 2 Tu 1 . - CDS 6530 - 6697 251 ## EF2003 tape measure protein, putative - Prom 6720 - 6779 2.8 9 3 Tu 1 . - CDS 6918 - 7268 492 ## EF2004 hypothetical protein - Term 7276 - 7309 5.1 10 4 Op 1 . - CDS 7321 - 8169 991 ## COG5492 Bacterial surface proteins containing Ig-like domains 11 4 Op 2 . - CDS 8170 - 8544 171 ## EF2006 hypothetical protein 12 4 Op 3 . - CDS 8547 - 8945 363 ## EF2007 hypothetical protein 13 4 Op 4 . - CDS 8938 - 9312 640 ## PROTEIN SUPPORTED gi|227517037|ref|ZP_03947086.1| ribosomal protein L23 14 4 Op 5 . - CDS 9309 - 9653 218 ## gi|227517038|ref|ZP_03947087.1| hypothetical protein HMPREF0348_0021 15 4 Op 6 . - CDS 9667 - 9849 390 ## EF2010 hypothetical protein 16 4 Op 7 . - CDS 9878 - 10765 1087 ## EF2011 hypothetical protein 17 4 Op 8 . - CDS 10779 - 11402 779 ## EF2012 hypothetical protein - Prom 11471 - 11530 1.9 18 5 Op 1 . - CDS 11532 - 11615 139 ## 19 5 Op 2 . - CDS 11620 - 11940 282 ## EF2013 hypothetical protein - Term 11960 - 11996 4.2 20 6 Op 1 . - CDS 11997 - 12227 264 ## EF2014 coenzyme F420 hydrogenase domain-containing protein 21 6 Op 2 . - CDS 12228 - 13472 825 ## EF2015 minor head protein, putative Predicted protein(s) >gi|237663578|gb|GG668940.1| GENE 1 2 - 212 146 70 aa, chain - ## HITS:1 COG:no KEGG:EF2810 NR:ns ## KEGG: EF2810 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 70 115 195 302 115 76.0 4e-25 MNAASKTEGEMGSYWQSIEDLIADMTAFINENKGDFTDWMNARKEEFEAWRDAQKTDFTS WFESIKDILK >gi|237663578|gb|GG668940.1| GENE 2 212 - 553 498 113 aa, chain - ## HITS:1 COG:no KEGG:EF2810 NR:ns ## KEGG: EF2810 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 110 1 110 302 218 97.0 5e-56 MVKWQATLSTTEPYNYIGIQNVRQGNRNTEVLEAILVENALPLDLTGCEVFFESVIDNKY PIQRSAKIVNAKKGIIQYTFDEYSMQSLHRQEAYFSIHKGDNLIGATQTFLTL >gi|237663578|gb|GG668940.1| GENE 3 572 - 1612 1027 346 aa, chain - ## HITS:1 COG:L63739_1 KEGG:ns NR:ns ## COG: L63739_1 COG4926 # Protein_GI_number: 15673033 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Lactococcus lactis # 24 167 588 727 727 87 38.0 5e-17 MWAAKKLYPGQNGGGGSGAGTGGYPSEVTSDADKFAWDLWSYLLANGYSKAAAAGILGNV QGEVGPSMNPDTEQIGGPAYGWVQWDGSAYPLVGAPTWNGREYVQRLIAAAGIKQDYRTS LAQAQLINWCMFNGQWLGQVSPLTVDEFKVVSSPKTAAYAFELNFERPAAAHQERQTYAQ AWYDKFKDLKASTATGKAGIEHLETLMGKWLGNGQCYAVPAEYSGFMGGCGLGAGTIYGF SHVIGDTSSAADIGEAYDWNAVGWRVIQNPTYQDLVVGAIVNIRRGGQWGTGWTVDPTYG HTGVIYGLNNGRIQTIEQNAEQGQIVAKYDRLYFANSIQSIVIPPK >gi|237663578|gb|GG668940.1| GENE 4 1621 - 2682 1017 353 aa, chain - ## HITS:1 COG:L63739_1 KEGG:ns NR:ns ## COG: L63739_1 COG4926 # Protein_GI_number: 15673033 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Lactococcus lactis # 22 214 251 440 727 175 45.0 2e-43 MEMQLKANISVSILMFTLNTFQFTEDQGVKDIASLNKVASKYFTTLYPGSDKPKVSIELE IEKLTDSEEAKEFAKMRNYNLFDTFTVYHKLYDIDIQTKVTGIVYDALAEKTIKITAGDI QVAFYKQQSQDFQEAIKTLTKKEYMSDFVDYITDLINGVEGGSIRQYPKNRPNTHYYLDT ESTDTAKDVIAINHKGIGFSRTGWKGPFKNAGELMDIECGLYRSWQNKINIFETSFNSCG DILRMVNGTLQAWNNKKKIMELTKKGMEFWNGNSHVGTMGTKGNPFPGLADKNGNPIVSD GNSLLLVADNPQKIIGLSNQSGTGHLITGPTQFFVGNNFNFFGPNGSKAIFDS >gi|237663578|gb|GG668940.1| GENE 5 2609 - 3364 569 251 aa, chain - ## HITS:1 COG:L63739_1 KEGG:ns NR:ns ## COG: L63739_1 COG4926 # Protein_GI_number: 15673033 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Lactococcus lactis # 1 248 1 250 727 243 47.0 3e-64 MIPVIFKPGEKDFSTNGLGRLVDATRCEITEEANGKYELEMDYPAISRFSDYFENGYQIK AKPNDLEEYHIFEIKQTFKDTFTNSIVIYAQSRTYKLGNRQVRLVTVDNRNGAEAMKLIE QNMDEPCDIKLYSDINTASSTTFEARNVLNCIAGEQGSLLQYWGGEIKREPFKLSLLRRR GRDNVGTVRYGKDLKGLTIKFDWQSIVTKVLPFAELQSGADGTSQRIYGNAVKSEYISKY PDVYAQYIPVY >gi|237663578|gb|GG668940.1| GENE 6 3361 - 4116 306 251 aa, chain - ## HITS:1 COG:L63101 KEGG:ns NR:ns ## COG: L63101 COG4722 # Protein_GI_number: 15673032 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Lactococcus lactis # 13 251 4 249 249 157 37.0 2e-38 MQLGVLLVEFKRGQFFLNGKHSSEFNVFMRERPERLSAGRVVELRERMGNDSIAVDFAYY KNVERTITCYAKANTLQEVSFLEDEISFWLDMGNYSDFIVYFDEHYIYQAIVTSPPKFTG TRKSGVLIPFEFTVSIRPFKKNRIGQYWISNPNQLINTEKYPSEPIIQILGSGDISFFIN NQSYSLKAINGDIIIDSEKQEAYRKSGGAFEILDHKTLFKDYPILKCGENNFRWTGKVTE FKVQPNWRRKV >gi|237663578|gb|GG668940.1| GENE 7 4085 - 5659 1250 524 aa, chain - ## HITS:1 COG:BH0960 KEGG:ns NR:ns ## COG: BH0960 COG5412 # Protein_GI_number: 15613523 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Bacillus halodurans # 72 440 136 494 584 75 23.0 2e-13 MKEVPGNAADWVKNKWNGTKEFFSGLWNSTKEGSKNTWENIKQSAADSAKSVGESFKNGF DNVKDWFKGVGKSISDVFTTAFDFVWKYIGPYVTGIKNAFKMVVNAMKANIENVKMIAEN VVTILKNVLLAPILFITSMITGGWEEAKENMIAVWDNIAEAAQTIWFGIKNIFYNTVTAI SYSVTSIFNGLMLTIKKIWIDVKLFFTLLWIDIKYGAINVWIEIKYSIIETWINIKFEAI RIWESLKTWFFETVENIKNGVIDGWNNLKQGTVDTFNATVQWSKDTWNNFKQWIVDLVTG IKDGIINGWENLKQGTVNIFNNLVQGAKNAWNNLKRSVSDTVENVKQTFNDMRHIDLFEI GKNIIQGLVNGIGSMIGAVNKKIKEVAGNIKEKIKGALGIHSPSRWMRDMIGKNIVLGVV AGIDQEKGTLDKSVKKMTDLPTELPNFSTTGRYINQQGAQTESLAKNKGNATTNIGGDTF NINIQAMGKLNEKQLMDMAKDLVKYIQIVKNRDSDATGGAFGGI >gi|237663578|gb|GG668940.1| GENE 8 6530 - 6697 251 55 aa, chain - ## HITS:1 COG:no KEGG:EF2003 NR:ns ## KEGG: EF2003 # Name: not_defined # Def: tape measure protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 53 1 53 974 99 98.0 4e-20 MNNEDLVLKMILDESGFSQGLNSAVKKLQGFDVEVDRTGQKGGRSLGSIWTSLAS >gi|237663578|gb|GG668940.1| GENE 9 6918 - 7268 492 116 aa, chain - ## HITS:1 COG:no KEGG:EF2004 NR:ns ## KEGG: EF2004 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 116 1 116 116 204 100.0 7e-52 MASKFQQKIKLMIKDGSKYTTKQFTSAEFLPGSVMDTGTDLQIRLEEATKTNDMEAIRPI LRECYDFIADVIFEKQFTGQEYIDGMDARELLKITAQLLGSVTSGYDAIYSEQKKK >gi|237663578|gb|GG668940.1| GENE 10 7321 - 8169 991 282 aa, chain - ## HITS:1 COG:YPO2116 KEGG:ns NR:ns ## COG: YPO2116 COG5492 # Protein_GI_number: 16122351 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Yersinia pestis # 198 279 224 305 306 63 46.0 6e-10 MAKKKNVSVISVEKPTWFPLTDETGAFPVYGAPITIGTAVSIKPDVTTETTPDYGDSVVQ DQYVAFGGAEVTLETNGYQNEVLAEITGGKKLKGGVLRSADDIASDGAFAYRRRKSNGKY RYTIFYKGKFALTSDETSTLEGSSVSYTHPEWTGSFVDVPGLGYMYSVDEDDEGVDLEMI KNWFTEVMDPRKENTTAVTGVTLDQTELNLKVGQTATLTPTITPDNASNKKYQFRSESEA IGTVTPIQGKVTAVGEGTTEIVVTTEDGNFTAKCTLNVTTAD >gi|237663578|gb|GG668940.1| GENE 11 8170 - 8544 171 124 aa, chain - ## HITS:1 COG:no KEGG:EF2006 NR:ns ## KEGG: EF2006 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 124 1 124 124 227 100.0 1e-58 MYDKILKMLTDTIKQFSDAPIYLDNVMQSSEPFYFVLSVEESMTDNVGQNVQNKAYNVDI ALVDSKKDKQLVKSLTESCGAFFNVLNLDGNELFPEDYQTFKTDGIQHINFNVAFPQLIE WSEK >gi|237663578|gb|GG668940.1| GENE 12 8547 - 8945 363 132 aa, chain - ## HITS:1 COG:no KEGG:EF2007 NR:ns ## KEGG: EF2007 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 132 1 132 132 227 100.0 1e-58 MSKSDLRMKSNADKVIANLKKMTPIAEKEGAAMVNDSLAKIYQLIVPMTPIKSGDLRRGY RIIKARKLSSGRIVGALINNEKYFRYVNDGHRTKNGGFVKGRFMLQKSNKLANATYIPKR FKQMAIIIVKKG >gi|237663578|gb|GG668940.1| GENE 13 8938 - 9312 640 124 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227517037|ref|ZP_03947086.1| ribosomal protein L23 [Enterococcus faecalis TX0104] # 1 124 1 124 124 251 99 3e-66 MNEAEVLAATYFDTCVIERISDIENVESGITEQVYFPIHDGKLPCAFSQGSMGNLPVIEN KEAFKFNISYEEQKLFLEPNIKVKKGDRITITQGTGQKHVLFSKKPFYYPSHIEVVLSGS SIDE >gi|237663578|gb|GG668940.1| GENE 14 9309 - 9653 218 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227517038|ref|ZP_03947087.1| ## NR: gi|227517038|ref|ZP_03947087.1| hypothetical protein HMPREF0348_0021 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_2604 [Enterococcus faecalis HH22] hypothetical protein HMPREF9510_00955 [Enterococcus faecalis TX0470] hypothetical protein HMPREF0348_0021 [Enterococcus faecalis TX0104] hypothetical protein HMPREF0346_2604 [Enterococcus faecalis HH22] hypothetical protein HMPREF9510_00955 [Enterococcus faecalis TX0470] hypothetical protein HMPREF9518_02832 [Enterococcus faecalis TX1342] # 1 114 1 114 114 196 100.0 3e-49 MVDEKKEEIVEKIQLMLPNASEDRILSVLNLVIFEINSYNTCKIDIAWDEFEPLIIEVIY KALKNEIDKSVASVKRGDTSISYVVESKDIQSLMKNYSSAIKRILGCDSGVFFY >gi|237663578|gb|GG668940.1| GENE 15 9667 - 9849 390 60 aa, chain - ## HITS:1 COG:no KEGG:EF2010 NR:ns ## KEGG: EF2010 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 60 1 60 60 92 100.0 6e-18 MATAKKEVTYRVLDKKNFVGFMHPKTKKFITANENNEFIVSEDDKEAIEILERAADTFKV >gi|237663578|gb|GG668940.1| GENE 16 9878 - 10765 1087 295 aa, chain - ## HITS:1 COG:no KEGG:EF2011 NR:ns ## KEGG: EF2011 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 295 1 295 295 548 99.0 1e-155 MKKSSLNNLEYLDISQEVNALQVPNTPFLSYLLGAGKVEAAKSTEIKWREYGMNNDDSSA QLEGGEYADAESDRTWFNNYTEIFRKSTSVSGTLDAINVDGVGNELNSQVALRATEMKID LNRKLIVGVKADESGSKGRQMNGILNLISSTNKVETAAAGAVTRKDIDALFKTMFQKGYM GEKLCLVAPDMQELMTDQLDEKSTKIVQFGDKLTFGLQLGNIVSNYGSGIALIEPNLPNG TIAAIDTNYVKLRPLREWRAEELAKTTDSRRIGLVGEYSIEYKASNSGAILNLKA >gi|237663578|gb|GG668940.1| GENE 17 10779 - 11402 779 207 aa, chain - ## HITS:1 COG:no KEGG:EF2012 NR:ns ## KEGG: EF2012 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 207 1 207 207 304 98.0 2e-81 MKPNLLPMDLQMFAEEDGGTNFTFDDFKAFVESNEEAQKFVQSQSQSAADKQLEAWKQNN LEKIKETTIKEYEESKKNKTPEQIKLEELQAEFEAEKALRVTSDNKAFVAEKIAGLDWDG DLKDSISQFMLNNLVSSDTEFTKKAVEGFTELLEAINDKHAEAIKNVEMTKAFGNKSQQT NMVTGNQTKSFENPEAALGQKLQAFID >gi|237663578|gb|GG668940.1| GENE 18 11532 - 11615 139 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDPYDYLDADYEEHLLREEKQLKSDKC >gi|237663578|gb|GG668940.1| GENE 19 11620 - 11940 282 106 aa, chain - ## HITS:1 COG:no KEGG:EF2013 NR:ns ## KEGG: EF2013 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 106 1 106 106 194 93.0 9e-49 MKGLFEAVLNLEVTNGTEKAYKKAFEQENERYLTKHTLRDGNGHIVKDELESVWSGNYCH VDILYSIPARKSKLTISIVSRTLQNVKDAVTDYQMLGAELVHKNWE >gi|237663578|gb|GG668940.1| GENE 20 11997 - 12227 264 76 aa, chain - ## HITS:1 COG:no KEGG:EF2014 NR:ns ## KEGG: EF2014 # Name: not_defined # Def: coenzyme F420 hydrogenase domain-containing protein # Organism: E.faecalis # Pathway: not_defined # 1 76 1 76 76 129 100.0 3e-29 MFSCEDGAWSIIDDAVKKYEQHFHDEFPIYEYIDVTKSDDFDFSILGAKKLAKFIDEHIK ENKSVHVPSDYHSRLY >gi|237663578|gb|GG668940.1| GENE 21 12228 - 13472 825 414 aa, chain - ## HITS:1 COG:no KEGG:EF2015 NR:ns ## KEGG: EF2015 # Name: not_defined # Def: minor head protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 414 221 634 634 820 98.0 0 MKNDGVISGMFKLEQGKFNRSIENLVRTEYSHFAVEGVRKSLNDVGVKQTQSWSAEDERV CSICGRRHGKEIKDDWHPPYHGRCRCTEIPIVPEISDDIDKLYEEMFGDLLDEFASKQWG IKLNHPKVSATKLDLKSVLDKTNMQEALGKENYSNFLDHLDGITDQRVLNLINVMGHKLE FKDIKEVRAFAQGKSIQLSQKSFDGDRGVNPYQTVYHEIGHALDHLGLEVLTGKNTMPTG KLIKRKLGRRTTFIEEHITHASSLSEYNIKEALERDFWKYVNGDLPSYNDLGNRPRNADK KKAYDDLRAEIYKKNTENLQKTRERLSKIVRENPNSVSAISDMIESIGSLGDYPLGFGHG KRYWQTTGSTETEFFAHMTEVVANDKSRELMKEIFPTAVSQWEKLVDDILKAVK Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:34:29 2011 Seq name: gi|237663577|gb|GG668941.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD20, whole genome shotgun sequence Length of sequence - 94468 bp Number of predicted genes - 114, with homology - 111 Number of transcription units - 38, operones - 24 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 322 326 ## EF2810 hypothetical protein 2 1 Op 2 . + CDS 315 - 632 369 ## MPTP_1474 hypothetical protein 3 1 Op 3 . + CDS 625 - 942 538 ## gi|227519942|ref|ZP_03949991.1| hypothetical protein HMPREF0348_2925 4 1 Op 4 . + CDS 942 - 1493 570 ## EF2807 hypothetical protein 5 1 Op 5 . + CDS 1508 - 1882 480 ## EF2806 hypothetical protein 6 1 Op 6 . + CDS 1882 - 2019 200 ## EF2805 hypothetical protein 7 1 Op 7 . + CDS 2054 - 2287 336 ## EF2804 hypothetical protein 8 1 Op 8 . + CDS 2290 - 2496 292 ## EF2803 holin 9 1 Op 9 . + CDS 2499 - 2720 342 ## EF2802 endolysin - Term 3855 - 3884 -0.2 10 2 Op 1 . - CDS 3966 - 4238 263 ## COG0693 Putative intracellular protease/amidase 11 2 Op 2 . - CDS 4235 - 4570 351 ## EF0110 ArsR family transcriptional regulator + Prom 4633 - 4692 5.8 12 3 Op 1 . + CDS 4750 - 5766 1109 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases + Prom 5869 - 5928 8.4 13 3 Op 2 . + CDS 5998 - 8484 2498 ## COG3525 N-acetyl-beta-hexosaminidase + Term 8516 - 8561 14.6 + Prom 8683 - 8742 7.2 14 4 Op 1 . + CDS 8769 - 8930 222 ## EF0115 endoribonuclease L-PSP, putative 15 4 Op 2 . + CDS 8943 - 10037 920 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 10055 - 10095 12.2 - Term 10043 - 10083 12.2 16 5 Op 1 . - CDS 10087 - 10530 430 ## COG4815 Uncharacterized protein conserved in bacteria 17 5 Op 2 . - CDS 10545 - 11090 695 ## EF0120 hypothetical protein - Prom 11123 - 11182 4.6 - Term 11108 - 11160 9.5 18 6 Tu 1 . - CDS 11241 - 11537 135 ## EF0124 hypothetical protein - Prom 11591 - 11650 5.8 - Term 11664 - 11713 14.6 19 7 Tu 1 . - CDS 11721 - 13283 1930 ## COG0519 GMP synthase, PP-ATPase domain/subunit - Prom 13491 - 13550 5.5 20 8 Tu 1 . - CDS 13595 - 14518 777 ## COG1072 Panthothenate kinase - Prom 14577 - 14636 5.6 + Prom 14584 - 14643 4.0 21 9 Op 1 . + CDS 14673 - 15260 685 ## COG2755 Lysophospholipase L1 and related esterases 22 9 Op 2 . + CDS 15275 - 15883 741 ## COG2813 16S RNA G1207 methylase RsmC + Term 15888 - 15925 7.1 - Term 15874 - 15911 7.1 23 10 Tu 1 . - CDS 15916 - 16929 874 ## COG1816 Adenosine deaminase - Prom 16995 - 17054 8.4 + Prom 16952 - 17011 10.4 24 11 Tu 1 . + CDS 17089 - 18096 1017 ## COG1609 Transcriptional regulators + Prom 18153 - 18212 6.6 25 12 Op 1 7/0.000 + CDS 18237 - 19538 1717 ## COG0213 Thymidine phosphorylase 26 12 Op 2 3/0.000 + CDS 19566 - 20228 911 ## COG0274 Deoxyribose-phosphate aldolase 27 12 Op 3 . + CDS 20266 - 20661 415 ## COG0295 Cytidine deaminase - Term 20496 - 20531 -0.5 28 13 Tu 1 . - CDS 20642 - 20839 100 ## - Prom 21015 - 21074 6.3 + Prom 20675 - 20734 3.3 29 14 Op 1 2/0.000 + CDS 20757 - 21830 1490 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 30 14 Op 2 15/0.000 + CDS 21884 - 22969 1424 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein + Term 23027 - 23070 7.1 + Prom 23015 - 23074 3.2 31 15 Op 1 24/0.000 + CDS 23175 - 24743 2093 ## COG3845 ABC-type uncharacterized transport systems, ATPase components 32 15 Op 2 26/0.000 + CDS 24736 - 25869 1241 ## COG4603 ABC-type uncharacterized transport system, permease component 33 15 Op 3 . + CDS 25869 - 26822 1096 ## COG1079 Uncharacterized ABC-type transport system, permease component + Term 26829 - 26868 8.0 + Prom 27033 - 27092 5.5 34 16 Op 1 4/0.000 + CDS 27132 - 28298 1402 ## COG1015 Phosphopentomutase 35 16 Op 2 1/0.091 + CDS 28315 - 29133 1113 ## COG0005 Purine nucleoside phosphorylase 36 16 Op 3 . + CDS 29152 - 29859 964 ## COG0813 Purine-nucleoside phosphorylase + Term 29865 - 29905 7.1 - Term 29852 - 29892 7.1 37 17 Op 1 . - CDS 29898 - 30836 1215 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 38 17 Op 2 . - CDS 30760 - 30936 78 ## gi|315143253|gb|EFT87269.1| hypothetical protein HMPREF9495_02937 - Prom 31031 - 31090 8.5 + Prom 30948 - 31007 8.2 39 18 Op 1 35/0.000 + CDS 31072 - 31872 260 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 31903 - 31931 -0.0 40 18 Op 2 20/0.000 + CDS 31959 - 32879 772 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 41 18 Op 3 . + CDS 32876 - 33880 947 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component + Prom 33922 - 33981 5.5 42 19 Tu 1 . + CDS 34009 - 35196 1552 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family + Term 35208 - 35241 5.4 - Term 35196 - 35229 5.4 43 20 Tu 1 . - CDS 35253 - 35939 869 ## COG0588 Phosphoglycerate mutase 1 - Prom 35984 - 36043 5.9 - Term 36059 - 36113 12.5 44 21 Op 1 . - CDS 36114 - 36689 536 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 45 21 Op 2 . - CDS 36731 - 37411 814 ## COG0120 Ribose 5-phosphate isomerase - Prom 37492 - 37551 4.3 + Prom 37541 - 37600 5.2 46 22 Op 1 56/0.000 + CDS 37756 - 38169 706 ## PROTEIN SUPPORTED gi|29374844|ref|NP_813997.1| 30S ribosomal protein S12 47 22 Op 2 51/0.000 + CDS 38225 - 38695 806 ## PROTEIN SUPPORTED gi|29374845|ref|NP_813998.1| 30S ribosomal protein S7 + Prom 38697 - 38756 1.9 48 22 Op 3 30/0.000 + CDS 38779 - 40860 2439 ## COG0480 Translation elongation factors (GTPases) + Prom 40871 - 40930 7.2 49 22 Op 4 . + CDS 41011 - 42198 1486 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 42251 - 42293 7.7 + Prom 42299 - 42358 3.1 50 23 Tu 1 . + CDS 42379 - 43203 1020 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase + Term 43218 - 43252 -0.3 + Prom 43266 - 43325 6.4 51 24 Op 1 . + CDS 43475 - 44641 1103 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases + Term 44654 - 44710 8.2 52 24 Op 2 . + CDS 44711 - 44845 48 ## PROTEIN SUPPORTED gi|227515486|ref|ZP_03945535.1| ribosomal protein S10 53 24 Op 3 . + CDS 44852 - 44923 60 ## 54 24 Op 4 40/0.000 + CDS 44955 - 45299 576 ## PROTEIN SUPPORTED gi|227519991|ref|ZP_03950040.1| 30S ribosomal protein S10 55 24 Op 5 58/0.000 + CDS 45321 - 45950 1059 ## PROTEIN SUPPORTED gi|29374851|ref|NP_814004.1| 50S ribosomal protein L3 56 24 Op 6 61/0.000 + CDS 45976 - 46599 1033 ## PROTEIN SUPPORTED gi|227519993|ref|ZP_03950042.1| 50S ribosomal protein L4 57 24 Op 7 61/0.000 + CDS 46599 - 46889 471 ## PROTEIN SUPPORTED gi|29374853|ref|NP_814006.1| ribosomal protein L23 58 24 Op 8 60/0.000 + CDS 46929 - 47759 1431 ## PROTEIN SUPPORTED gi|29374854|ref|NP_814007.1| 50S ribosomal protein L2 59 24 Op 9 59/0.000 + CDS 47802 - 48080 486 ## PROTEIN SUPPORTED gi|29374855|ref|NP_814008.1| 30S ribosomal protein S19 60 24 Op 10 61/0.000 + CDS 48096 - 48449 564 ## PROTEIN SUPPORTED gi|227519997|ref|ZP_03950046.1| 50S ribosomal protein L22 61 24 Op 11 50/0.000 + CDS 48516 - 49172 1112 ## PROTEIN SUPPORTED gi|29374857|ref|NP_814010.1| 30S ribosomal protein S3 62 24 Op 12 50/0.000 + CDS 49175 - 49609 753 ## PROTEIN SUPPORTED gi|29374858|ref|NP_814011.1| 50S ribosomal protein L16 63 24 Op 13 50/0.000 + CDS 49599 - 49787 296 ## PROTEIN SUPPORTED gi|29374859|ref|NP_814012.1| ribosomal protein L29 64 24 Op 14 50/0.000 + CDS 49790 - 50077 476 ## PROTEIN SUPPORTED gi|227520001|ref|ZP_03950050.1| 30S ribosomal protein S17 65 24 Op 15 57/0.000 + CDS 50135 - 50503 591 ## PROTEIN SUPPORTED gi|29374861|ref|NP_814014.1| ribosomal protein L14 66 24 Op 16 48/0.000 + CDS 50539 - 50850 517 ## PROTEIN SUPPORTED gi|29374862|ref|NP_814015.1| 50S ribosomal protein L24 67 24 Op 17 50/0.000 + CDS 50876 - 51415 896 ## PROTEIN SUPPORTED gi|29374863|ref|NP_814016.1| 50S ribosomal protein L5 68 24 Op 18 50/0.000 + CDS 51434 - 51619 333 ## PROTEIN SUPPORTED gi|29374864|ref|NP_814017.1| 30S ribosomal protein S14 69 24 Op 19 55/0.000 + CDS 51655 - 52053 660 ## PROTEIN SUPPORTED gi|29374865|ref|NP_814018.1| 30S ribosomal protein S8 70 24 Op 20 46/0.000 + CDS 52085 - 52621 909 ## PROTEIN SUPPORTED gi|227520007|ref|ZP_03950056.1| 50S ribosomal protein L6 + Term 52664 - 52705 4.1 + Prom 52677 - 52736 3.5 71 24 Op 21 56/0.000 + CDS 52773 - 53138 599 ## PROTEIN SUPPORTED gi|227520008|ref|ZP_03950057.1| 50S ribosomal protein L18 72 24 Op 22 50/0.000 + CDS 53159 - 53659 817 ## PROTEIN SUPPORTED gi|29374868|ref|NP_814021.1| ribosomal protein S5 73 24 Op 23 48/0.000 + CDS 53674 - 53853 286 ## PROTEIN SUPPORTED gi|29374869|ref|NP_814022.1| ribosomal protein L30 74 24 Op 24 53/0.000 + CDS 53901 - 54341 731 ## PROTEIN SUPPORTED gi|29374870|ref|NP_814023.1| 50S ribosomal protein L15 75 24 Op 25 28/0.000 + CDS 54342 - 55640 761 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 + Term 55648 - 55684 5.7 76 24 Op 26 6/0.000 + CDS 55727 - 56377 801 ## COG0563 Adenylate kinase and related kinases + Term 56520 - 56553 2.0 + Prom 56401 - 56460 7.0 77 24 Op 27 . + CDS 56588 - 56806 311 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 78 24 Op 28 . + CDS 56839 - 56955 210 ## PROTEIN SUPPORTED gi|29374874|ref|NP_814027.1| 50S ribosomal protein L36 79 24 Op 29 48/0.000 + CDS 56975 - 57340 606 ## PROTEIN SUPPORTED gi|29374875|ref|NP_814028.1| 30S ribosomal protein S13 80 24 Op 30 32/0.000 + CDS 57368 - 57757 654 ## PROTEIN SUPPORTED gi|29374876|ref|NP_814029.1| 30S ribosomal protein S11 81 24 Op 31 50/0.000 + CDS 57838 - 58776 1072 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 82 24 Op 32 . + CDS 58850 - 59233 618 ## PROTEIN SUPPORTED gi|29374878|ref|NP_814031.1| 50S ribosomal protein L17 + Term 59267 - 59320 1.0 + Prom 59396 - 59455 6.9 83 25 Op 1 . + CDS 59509 - 60708 1297 ## EF0235 hypothetical protein 84 25 Op 2 . + CDS 60724 - 61899 1201 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 61911 - 61953 9.1 + Prom 61956 - 62015 7.4 85 26 Op 1 15/0.000 + CDS 62101 - 62940 1030 ## COG1122 ABC-type cobalt transport system, ATPase component 86 26 Op 2 34/0.000 + CDS 62916 - 63785 440 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 87 26 Op 3 8/0.000 + CDS 63785 - 64579 721 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 88 26 Op 4 . + CDS 64598 - 65347 809 ## COG0101 Pseudouridylate synthase + Term 65351 - 65395 8.2 - Term 65331 - 65387 12.2 89 27 Tu 1 . - CDS 65398 - 65709 536 ## COG0393 Uncharacterized conserved protein - Prom 65736 - 65795 3.4 - Term 65768 - 65833 17.3 90 28 Op 1 . - CDS 65841 - 67196 1660 ## COG1114 Branched-chain amino acid permeases - Prom 67223 - 67282 3.7 91 28 Op 2 . - CDS 67287 - 67778 468 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 67814 - 67873 9.7 + Prom 67760 - 67819 6.7 92 29 Tu 1 . + CDS 67967 - 68536 573 ## COG1611 Predicted Rossmann fold nucleotide-binding protein + Term 68542 - 68586 8.1 - Term 68522 - 68580 19.0 93 30 Op 1 16/0.000 - CDS 68581 - 69321 279 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 94 30 Op 2 . - CDS 69333 - 70916 1965 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 71014 - 71073 3.5 - Term 71423 - 71474 10.6 95 31 Tu 1 . - CDS 71475 - 71771 379 ## EF0248 hypothetical protein - Prom 71795 - 71854 5.7 + Prom 71865 - 71924 6.1 96 32 Op 1 . + CDS 71944 - 72657 815 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 97 32 Op 2 . + CDS 72662 - 73507 873 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 98 32 Op 3 . + CDS 73518 - 74030 574 ## COG1827 Predicted small molecule binding protein (contains 3H domain) + Term 74103 - 74140 -0.7 + Prom 74088 - 74147 8.3 99 33 Tu 1 . + CDS 74264 - 75769 1646 ## COG1705 Muramidase (flagellum-specific) + Term 75818 - 75871 13.1 + Prom 75956 - 76015 12.3 100 34 Tu 1 . + CDS 76046 - 77536 1639 ## COG1012 NAD-dependent aldehyde dehydrogenases - Term 77643 - 77700 15.3 101 35 Op 1 . - CDS 77770 - 78753 1275 ## COG0039 Malate/lactate dehydrogenases - Prom 78814 - 78873 7.5 102 35 Op 2 . - CDS 78971 - 79150 85 ## - Prom 79350 - 79409 4.0 + Prom 78962 - 79021 8.3 103 36 Op 1 7/0.000 + CDS 79089 - 79655 604 ## COG0193 Peptidyl-tRNA hydrolase 104 36 Op 2 2/0.000 + CDS 79675 - 83214 3640 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 105 36 Op 3 1/0.091 + CDS 83230 - 84819 1526 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 106 36 Op 4 . + CDS 84834 - 85097 354 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) + Term 85106 - 85172 10.0 + Prom 85264 - 85323 5.5 107 37 Op 1 . + CDS 85351 - 85830 464 ## EF0261 hypothetical protein 108 37 Op 2 2/0.000 + CDS 85875 - 86354 358 ## PROTEIN SUPPORTED gi|218290661|ref|ZP_03494752.1| RNA binding S1 domain protein + Term 86368 - 86421 9.0 109 37 Op 3 10/0.000 + CDS 86440 - 87828 1303 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 110 37 Op 4 11/0.000 + CDS 87847 - 88392 747 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase + Prom 88394 - 88453 2.2 111 37 Op 5 1/0.091 + CDS 88486 - 90642 1338 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 90647 - 90710 21.1 + Prom 90709 - 90768 5.4 112 38 Op 1 2/0.000 + CDS 90804 - 91700 1098 ## COG1281 Disulfide bond chaperones of the HSP33 family 113 38 Op 2 3/0.000 + CDS 91697 - 92710 554 ## PROTEIN SUPPORTED gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase + Term 92717 - 92753 4.1 + Prom 92716 - 92775 4.1 114 38 Op 3 . + CDS 92804 - 94300 2053 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 94306 - 94336 1.1 Predicted protein(s) >gi|237663577|gb|GG668941.1| GENE 1 2 - 322 326 106 aa, chain + ## HITS:1 COG:no KEGG:EF2810 NR:ns ## KEGG: EF2810 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 106 197 302 302 208 99.0 5e-53 VDPGGTMLAELMDARVDIQGVRHNSLSERLLADMNYLYHRLEERLYTIKYGNVNTLEILE DDSFSKNHEVEVLGTVNHPIEEGALIIATVDDSKQNVFTIEGVDNG >gi|237663577|gb|GG668941.1| GENE 2 315 - 632 369 105 aa, chain + ## HITS:1 COG:no KEGG:MPTP_1474 NR:ns ## KEGG: MPTP_1474 # Name: not_defined # Def: hypothetical protein # Organism: M.plutonius # Pathway: not_defined # 1 60 1 60 205 73 60.0 3e-12 MVDAKRMMETDENGIKRQFFPMTHVSAILGLTEIMAGNSKVSSVNGHTGAVIITRADLDL PIDGIMISKQEYDKMLKIIADYEDGKLGGSGVEFEKVKGDEEINA >gi|237663577|gb|GG668941.1| GENE 3 625 - 942 538 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227519942|ref|ZP_03949991.1| ## NR: gi|227519942|ref|ZP_03949991.1| hypothetical protein HMPREF0348_2925 [Enterococcus faecalis TX0104] conserved domain protein [Enterococcus faecalis TX0411] conserved domain protein [Enterococcus faecalis TX0635] hypothetical protein HMPREF0348_2925 [Enterococcus faecalis TX0104] conserved domain protein [Enterococcus faecalis TX0411] conserved domain protein [Enterococcus faecalis TX0635] conserved domain protein [Enterococcus faecalis TX0309B] conserved domain protein [Enterococcus faecalis TX0309A] # 1 105 1 105 105 168 100.0 1e-40 MPDLYVVKKDGVAIDVQTSTAGVVGLNEFVDGKISGAEAGTVSSVNGHTGEVILTASDVK ALPDTTVIPTLPSNATSEKDGLMSKTDKAKLDALPVFTFEKVGEA >gi|237663577|gb|GG668941.1| GENE 4 942 - 1493 570 183 aa, chain + ## HITS:1 COG:no KEGG:EF2807 NR:ns ## KEGG: EF2807 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 183 1 183 183 325 99.0 4e-88 MADIVQLKENGVVKYMKTHADAIDGVEGKLVKAVGNETVLGTKNFQDGIQIGGKSVSVNA KPTYEVVKDYWDGTGAYLTESQSVTISNSSNVDEIVLIFSRYNDNGGGIVHSIPVTPNIT KLKYELPAVAWVGSASADPTIAYKKISISKSGTSLVITGDTANTLNEANKKIVFREIGVM RRK >gi|237663577|gb|GG668941.1| GENE 5 1508 - 1882 480 124 aa, chain + ## HITS:1 COG:no KEGG:EF2806 NR:ns ## KEGG: EF2806 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 124 1 124 124 199 100.0 4e-50 MKKIYKVLYPVGFQIFEVQDDYVVALPFVEEKPLENLVNEQSQFFNFSEQKWEEAVTQDY TKKLNLLENLANGLEVSNSELKQANEKLTAKAESLAQINSKTMLTSLQNTREIDAIKEQI GGAK >gi|237663577|gb|GG668941.1| GENE 6 1882 - 2019 200 45 aa, chain + ## HITS:1 COG:no KEGG:EF2805 NR:ns ## KEGG: EF2805 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 45 1 45 45 82 100.0 8e-15 MYSYDDIKLMYDWGLFTPEQVAEFVPSCITEDEFTKMTGEPFSKS >gi|237663577|gb|GG668941.1| GENE 7 2054 - 2287 336 77 aa, chain + ## HITS:1 COG:no KEGG:EF2804 NR:ns ## KEGG: EF2804 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 77 1 77 77 139 100.0 3e-32 MKDDPLIEIVDRLARIETKLDNHEQLREKADIALSMAKNNEGDIAEIKENQKWTWRTIAG IGVSVAVYLITKYLGGI >gi|237663577|gb|GG668941.1| GENE 8 2290 - 2496 292 68 aa, chain + ## HITS:1 COG:no KEGG:EF2803 NR:ns ## KEGG: EF2803 # Name: not_defined # Def: holin # Organism: E.faecalis # Pathway: not_defined # 1 68 1 68 68 115 98.0 4e-25 MILPDKYYKIIKWGVLTVLPASSVLIATLGKAYGWQQTDMAVLTINTIATFLGVVTGVSA YNLKDKEK >gi|237663577|gb|GG668941.1| GENE 9 2499 - 2720 342 73 aa, chain + ## HITS:1 COG:no KEGG:EF2802 NR:ns ## KEGG: EF2802 # Name: not_defined # Def: endolysin # Organism: E.faecalis # Pathway: not_defined # 1 73 1 73 433 145 98.0 5e-34 MKKKILIGALVALFFMPLNVFAAKGDQGVDWAIYQGEQGRFGYAHDKFAIAQIGGYNASG IYEQYTYKTQVAS >gi|237663577|gb|GG668941.1| GENE 10 3966 - 4238 263 90 aa, chain - ## HITS:1 COG:BMEII1016 KEGG:ns NR:ns ## COG: BMEII1016 COG0693 # Protein_GI_number: 17989361 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Brucella melitensis # 2 68 3 71 235 57 40.0 9e-09 MKKILVVLTNVSRYHGTEEPTGLWLGEATEFVEEVTKAGFSVDYVSPQGGYVPLDPRSMK YVDSSIMAVYESADFQERALAHSLSLEEIP >gi|237663577|gb|GG668941.1| GENE 11 4235 - 4570 351 111 aa, chain - ## HITS:1 COG:no KEGG:EF0110 NR:ns ## KEGG: EF0110 # Name: not_defined # Def: ArsR family transcriptional regulator # Organism: E.faecalis # Pathway: not_defined # 1 111 1 111 111 187 100.0 1e-46 MKELEEIQTEFTALSDFLIALGDEKRQAIIIALLEDQACVGRRVTELTEATQLSRPAVSH HLKILKQAKLIDCRSEGTKNYYSLSHDTTKIEQLQQLLTHITSIMPGRKQA >gi|237663577|gb|GG668941.1| GENE 12 4750 - 5766 1109 338 aa, chain + ## HITS:1 COG:AGpA656 KEGG:ns NR:ns ## COG: AGpA656 COG0604 # Protein_GI_number: 16119675 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 334 26 359 359 298 48.0 1e-80 MMKAALIHKYGQKELAIEEVPLPTIHDNDVLVKIIAASINPIDLKTKDGKVKMLLNYQMP LILGSDFAGIVVSVGKNVQNFRLGDAVYGRVPKNRVGTFAEYIAVDQAAVAMKPKNLTFE EAAAIPLVGLTSYQALHDIMNVQPGQKVLIQAGSGGIGTIAIQLAKLAGAYVATTTSSKN KEWVQALGADEVIDYRTQNFEEVLSDYDYVFDTMGGTILEKAFSVVKPQGKVVTLSGIPN ERFAKEYGLPLWKQWAFKIATRKIHRLEQATDVSYHFLFMRPDGEQLALLTEFIEQGKLQ PIIDRVVPFSQIQEAVDYSLTGRAQGKIVVKIANVDHD >gi|237663577|gb|GG668941.1| GENE 13 5998 - 8484 2498 828 aa, chain + ## HITS:1 COG:SP0057_2 KEGG:ns NR:ns ## COG: SP0057_2 COG3525 # Protein_GI_number: 15900002 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetyl-beta-hexosaminidase # Organism: Streptococcus pneumoniae TIGR4 # 485 824 2 359 782 361 52.0 3e-99 MVFKVGNDLSTGRGENRETIVSWLGLLLLVGLTFILFSLFHQPMVSQANEPTQEKHFMVY YRAWRDKTMQGVNTTLPDENWLPMHDIPYGIDIVNVFSYVPKGQEALAQPFYDTLKNEYA PALHARGVRLVRGIDYSELLKVPYAGTTPTEAEFDAYAKELLTKFVDDLGIDGLDIDMET RPSEKDIVLSNGVIRALSKYIGPKSGTDRPFLYDTNAEYLPPLQDVSDCFDFLAYQQYGS DDQRTQRALNNLSPVLNGERFVPGLTFPEEQDRNRWYDTKEPYMESNMYKVARYSYENNL GGMFLYALDRDGRTYNEDDLNQIKPSNLLWTKTAIAESKGVSLAEMKAAAQHYLKRISYA NTDLEAQNRAAEAVTQATTLYDVNKAILGGDYGQGISNTYDAELEKGLLAIDLTTLYRTL DQAVTAIEKAENYTPETIQALQTTKETVATELAGKTYTAAQVTTWQTEVQTALDNLKEKQ TQPLKSVFSIDAGRKYFSVEQLEELVAKASQNGYTDVQLILGNDGLRFILDDMSVNVNGK KYNHNRVSKAIQRGNNAYYNDPNGNALTQKEMDRLLAFAKARNINIIPVINSPGHMDALL VAMEKLAIKNPTFDGSKRTVDLGNQKAVNFTKAIISKYVAYFSAHSEIFNFGGDEYANDV DTGGWAKLQSSGRYKDFVAYANDLAKIIKDAGMQPMSFNDGIYYNSDDSFGTFDPEIIIS YWTAGWSGYDVAKPEYFVQKGHKIFNTNDAWYWVAGNVDSGIYQYDDALANMSKKAFTDV PAGSPNLPIIGSIQCVWYDDPRRDYDFERIYTLMDTFSENYREYMVVK >gi|237663577|gb|GG668941.1| GENE 14 8769 - 8930 222 53 aa, chain + ## HITS:1 COG:no KEGG:EF0115 NR:ns ## KEGG: EF0115 # Name: not_defined # Def: endoribonuclease L-PSP, putative # Organism: E.faecalis # Pathway: not_defined # 1 53 1 53 422 99 96.0 3e-20 MSNENIVLARNTERAPKHPLAAQTVAFSHYNHLSAQLPIEPTSGQLVEGGIRS >gi|237663577|gb|GG668941.1| GENE 15 8943 - 10037 920 364 aa, chain + ## HITS:1 COG:PH0854 KEGG:ns NR:ns ## COG: PH0854 COG0251 # Protein_GI_number: 14590714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pyrococcus horikoshii # 239 354 18 134 137 100 44.0 3e-21 MKNIQAVVESINHVMSDIVRMTIFVKDMRDVAAVEEVYAAFFTHYYPAKTVVAVADLPLG ASVQMEALVSNGEGTIPNAPQAGDLIKLTNQTVQAPIDALASQTVAFSHYNNLSAQLPID PQTGRVVAGCVKTQTKQCLKNIKAILTSIDVPFDDIVKINIYLKDLSKLEAVNQVYAAFF PDSGIARTVNYMPARTVVAVADLPMGAAVQVEAVVSHGDGTPPQAIEDRHGLIIEANNTD HAPKCPFSTQTVAFSHYNHLSAQLPLDPKTNALVAGGIKEQTTQCLENIKAIIESVDHSL ADLVKVNIFVKEIEELAAVDDVYQTYFPEGTPARRVIGVTDLPKGAQIQIEAIAGNAEGT PPIG >gi|237663577|gb|GG668941.1| GENE 16 10087 - 10530 430 147 aa, chain - ## HITS:1 COG:lin1093 KEGG:ns NR:ns ## COG: lin1093 COG4815 # Protein_GI_number: 16800162 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 6 145 6 145 151 143 49.0 1e-34 MNSLPILEKAVGAITLLSEEKQNAEYEGFLCQVNESQQLIRSRLAKKTPKKEGYFVAFWE KNQQNQNEAFDATEAPEMLAIVISDQEKQGLFLLPKECLIQQKILKTHQQKGKMAARFYP SWCQNLNQTAKKTQKWQLAYFTDLSKY >gi|237663577|gb|GG668941.1| GENE 17 10545 - 11090 695 181 aa, chain - ## HITS:1 COG:no KEGG:EF0120 NR:ns ## KEGG: EF0120 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 4 181 1 178 178 342 98.0 4e-93 MEKMYRSPYEAYPYLSSKPEDLRCDFELMTDELASMTGLLRGYVQQLDVPEQPALTEELA KICELIYHVNPTTRTKLTVTEEEIAWLLERVNTMNELTYEENRPFVLPMGTICSSYAHIL RAKAKDIVRLLYRMDYGGKKIDPQLYDVVNLLSGYFFMLALYLNQLENGEEVPFVSRNYS I >gi|237663577|gb|GG668941.1| GENE 18 11241 - 11537 135 98 aa, chain - ## HITS:1 COG:no KEGG:EF0124 NR:ns ## KEGG: EF0124 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 94 26 119 119 100 92.0 1e-20 MSKATFLKYGFVVLFIGIFLLRAQKFISEPLSYLFSGILLLIVAYLILVKKMNFFSSLLT VTDQPSSTQQRLGQISGFVSLLIGLLLVILSFIFFLQL >gi|237663577|gb|GG668941.1| GENE 19 11721 - 13283 1930 520 aa, chain - ## HITS:1 COG:SP1445_2 KEGG:ns NR:ns ## COG: SP1445_2 COG0519 # Protein_GI_number: 15901295 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Streptococcus pneumoniae TIGR4 # 202 520 1 316 316 567 87.0 1e-161 MTNVADLTSVEKIIVLDFGSQFNQLITRRIREFGVFSELLSHRTTAEEIRKIAPKGIIFS GGPNSVYDKDAFSIDPEIYELGIPILGICYGMQLMTHNLGGKVEPAANREYGKAELEILG DATLFQGTPAKQTVWMSHGDLVTEIAPGFEKVGTSNDCPIASIEDANRKFYGVQFHPEVR HSEYGNDLLRHFAFDVCGCTGDWSMENFIDMEVAKIREQVGDKKVLLGLSGGVDSSVVGV LLQKAIGDQLTCIFVDHGLLRKGEAEQVMESLGGKFGLNIIKVDAKERFLSKLAGVSDPE QKRKIIGNEFVYVFDDEATKLAGEEGVSFLAQGTLYTDVIESGTETAQTIKSHHNVGGLP EDMQFELIEPLNTLFKDEVRALGTELGMPDAIVWRQPFPGPGLGIRVLGEITEDKLQIVR DSDAILREEIAAAGLDRDIWQYFTVLPGIRSVGVMGDGRTYDYTVGIRAVTSIDGMTADF ARIPWDVLQKISVRIVNEVAHVNRIVYDITSKPPATVEWE >gi|237663577|gb|GG668941.1| GENE 20 13595 - 14518 777 307 aa, chain - ## HITS:1 COG:L66222 KEGG:ns NR:ns ## COG: L66222 COG1072 # Protein_GI_number: 15673426 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Lactococcus lactis # 1 307 1 306 306 346 56.0 3e-95 MDDKMNYYPISREEWHGFYHDGKAPLTEAELDNIKSVNDQISLKDVQEIYVPLTHLIHLY MKEFESLTLSKGLFLHEYVSVPPFIIGIAGSVAVGKSTTARLLQRILARTFKRRNVQLIT TDGFLYPNKVLEEQGMMDRKGFPESYDMEKLINFLNEVKSGKDEIKAPVYSHSVYDVIEG EYELIQQPDILIVEGINTLQLPANQQIYVSDFFDFSIFVDADPALIEKWYLERFGALLDT AFLDPNNYYYQYAIGKREDAFAMARNVWKTVNLPNLEEYILPTRGRADIILHKTENHLID QIYLRKY >gi|237663577|gb|GG668941.1| GENE 21 14673 - 15260 685 195 aa, chain + ## HITS:1 COG:L161059 KEGG:ns NR:ns ## COG: L161059 COG2755 # Protein_GI_number: 15673705 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Lactococcus lactis # 3 191 8 189 191 102 39.0 5e-22 MRKIVLFGDSITAGYLEEAVSPVLVDLVKRDIAAMGLEEVAVINAGMPGDTTEDGLKRLN KEVLIEKPDEVVIFFGANDASLDRNITVATFRENLETMIHEIGSEKVILITPPYADSGRR PERPQTRIKELVKVAQEVGAAHNLPVIDLYKAMTVYPGTDEFLQADGLHFSQVGYELLGA LIVREIKGRLKPKQA >gi|237663577|gb|GG668941.1| GENE 22 15275 - 15883 741 202 aa, chain + ## HITS:1 COG:lin0284 KEGG:ns NR:ns ## COG: lin0284 COG2813 # Protein_GI_number: 16799361 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Listeria innocua # 3 199 4 200 201 229 57.0 2e-60 MANHYYTENPELAHDLESWSFPLRGRTFQFTTDSGVFSRGTVDYGSRVLIDAFEWENLPA GRLLDVGCGYGPIGLSLAAATGRLVEMVDVNQRAVGLAQMNAQRNQITTVDIHSSNVYET LNETTYAAIVSNPPIRAGKKVVHGILTGAFPLLKVGGTLTVVIQKKQGAPSAEKKMAEVF GNVEIVTKDKGYYILRSVKEAE >gi|237663577|gb|GG668941.1| GENE 23 15916 - 16929 874 337 aa, chain - ## HITS:1 COG:L87453 KEGG:ns NR:ns ## COG: L87453 COG1816 # Protein_GI_number: 15672269 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Lactococcus lactis # 6 335 15 347 352 289 43.0 6e-78 MEESRVRQLPKIELHCHLDGSIRPTTLRTIAEKQNIPLPQDEQALKELVVAPEKCTDLND YLTRFDFVLTCLQTAEALQAAAYDVISQAAEDGVAYIEVRFAPSQHTEKGLRLPEIVTAV LTGLKQGEEDFGVKSNALLCGMRHDQQQAIEKIVHLAHDFRETGVVGFDLAGNEVDFPPY TFEDVLALANQLSIPLTLHAGECGCGKNVADAVTLGATRIGHGIALKDTPEYLALLKEKK VLLEMCPTSNFQTGTVKTLAEYPFQQFIEAGLAVCINTDNRTVSDTTLTKEFMKLATWYQ LSYDEMKQLTKNALAGAFLSPDEKKLLNQKIDQAYLF >gi|237663577|gb|GG668941.1| GENE 24 17089 - 18096 1017 335 aa, chain + ## HITS:1 COG:lin2102 KEGG:ns NR:ns ## COG: lin2102 COG1609 # Protein_GI_number: 16801168 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 1 335 1 333 336 321 47.0 1e-87 MKLTIKEIADMAGVSVTTVSQILNNKGSRFSEKTRNKVLAVVAENHYKPDYFASNVINRH SKTIGMIVPDVTDFFFSKVIEGVETYLNSLGYMILLCNSKHDSEQAMQYVSELIHRSVDG IIFATPNVLPENHILKDRREHPIPVILVDRGINPRDSGRLIVKEYEGAYQAVHHLIQQGH QHIGMLRESAGYYRLTERVTAYQHALQDNNLPFRPHYVCAGELNLHGGYAAAKEVLKNEE ITAIFCGNDEMAMGAYQAIEEAGKKIPDDISVVGFDGLEISEYLVPSLTTVYQPSFDIGY YAAKFLVEAIADPTGKVPNKVFDATFIARKSTKPI >gi|237663577|gb|GG668941.1| GENE 25 18237 - 19538 1717 433 aa, chain + ## HITS:1 COG:lin2101 KEGG:ns NR:ns ## COG: lin2101 COG0213 # Protein_GI_number: 16801167 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Listeria innocua # 1 433 1 433 433 540 69.0 1e-153 MRMVDIIEKKRDGHQLTSEEIQFIINGYTDGSIPDYQVSAFLMAVFYQDMTDEEITQMTL AMVHSGEIVDLSSIEGIKVDKHSTGGVGDTTTLILAPLVASVGVNVAKMSGRGLGYTGGT LDKLEAIPGFKVELTEERFIQLVNDTKVAVIGQSGDLAPADKKLYALRDVTATVDSIPLI ASSIMSKKIAAGADAIVLDVTTGEGAFMKDLASARRLAETMVRIGKLANRQTMAVISDMS QPLGEAIGNSLEIVEAIETLQGNGPEDLVEMCYVLGSQMVVLAKKAETLDEARALLEEAL ASGRALAKFKEMIENQGGDSSVVDQPEKLLTATYQFDLPAKETGVVQKIVANEIGVAAML LGAGRATKEDTIDFAVGLKLHKKVGSPVEKGESLLTIYANREDVTEVEQLLYKNIEIGPT GEEPILIHDIITE >gi|237663577|gb|GG668941.1| GENE 26 19566 - 20228 911 220 aa, chain + ## HITS:1 COG:L63310 KEGG:ns NR:ns ## COG: L63310 COG0274 # Protein_GI_number: 15673422 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Lactococcus lactis # 1 216 1 215 220 281 68.0 7e-76 MELNRMIDHTILKPEATEAAVQKIIDEAKEYNFFSVCINPCWVAFASEQLADTDVAVCTV IGFPLGANTPEVKAYEAADAIKNGANEVDMVINIGALKSQQYDHVRQDIQGVVDAAKGKA LVKVIIETALLTDEEKVKACELAKEAGADFVKTSTGFSTGGAKVADIRLMRETVGPDMGV KASGGVHNAEEALAMIEAGATRIGASTGVAIVSGATGEGY >gi|237663577|gb|GG668941.1| GENE 27 20266 - 20661 415 131 aa, chain + ## HITS:1 COG:SP0844 KEGG:ns NR:ns ## COG: SP0844 COG0295 # Protein_GI_number: 15900731 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Streptococcus pneumoniae TIGR4 # 6 128 5 127 129 171 67.0 4e-43 MTVKQEWLDCAVEALAHAYVPYSNFPVGACLVTTDGKMYQGVNIENASFGLTNCAERTAI FKAISEDERTFQHLVVAGNTEAPISPCGACRQVMAEFFDPQMPVTLVGKDGATKTMTVEA LLPYSFTDKDF >gi|237663577|gb|GG668941.1| GENE 28 20642 - 20839 100 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLPPHAANPMVKATAANPRPKNFTCFTFRKAPYYFIYYFIRIYAIEIYFEPNETLCPFF KNLYL >gi|237663577|gb|GG668941.1| GENE 29 20757 - 21830 1490 357 aa, chain + ## HITS:1 COG:SP0845 KEGG:ns NR:ns ## COG: SP0845 COG1744 # Protein_GI_number: 15900732 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Streptococcus pneumoniae TIGR4 # 23 356 22 350 350 291 53.0 1e-78 MKQVKFLGLGLAAVALTIGLAACGGNSKKNANTKDDPQHSVVMVTDTAGIDDKSFNQSAW EGMQEWGKEHKLPEGPQGYAYIQSNEASDYTSNIDQAISSQFKTIFGIGYLLKNAVVDAA DANPETNFVLIDDTVNGKNNVASATFRDNESAYLAGVAAANTTKTNKVGFIGGVEGPVIG RFQAGFEKGVADAGKKLGKDIQITSTYAGTFADASKGRALASSMYQAGADIIYHAAATTG QGIFQEAKALNETGSKDKVWVIGVDRDQNEDGKYTTKDGKDDNLTLASTIKGVNIAVKKI SDLALEDKFPGGEHLTYGLKDGGVDLTTEALSDQAKTAVKEAKEQIISGDVKVPDQP >gi|237663577|gb|GG668941.1| GENE 30 21884 - 22969 1424 361 aa, chain + ## HITS:1 COG:SP0845 KEGG:ns NR:ns ## COG: SP0845 COG1744 # Protein_GI_number: 15900732 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Streptococcus pneumoniae TIGR4 # 39 359 35 350 350 297 58.0 3e-80 MKKAKLFGFSLIALGLSVSLAACGGGKGKTAESGGGKGDAAHSAVIITDTGGVDDKSFNQ SSWEGLQAWGKEHDLPEGSKGYAYIQSNDAADYTTNIDQAVSSKFNTIFGIGYLLKDAIS SAADANPDTNFVLIDDQIDGKKNVVSATFRDNEAAYLAGVAAANETKTNKVGFVGGEEGV VIDRFQAGFEKGVADAAKELGKEITVDTKYAASFADPAKGKALAAAMYQNGVDIIFHASG ATGQGVFQEAKDLNESGSGDKVWVIGVDRDQDADGKYKTKDGKEDNFTLTSTLKGVGTAV QDIANRALEDKFPGGEHLVYGLKDGGVDLTDGYLNDKTKEAVKTAKDKVISGDVKVPEKP E >gi|237663577|gb|GG668941.1| GENE 31 23175 - 24743 2093 522 aa, chain + ## HITS:1 COG:SP0846 KEGG:ns NR:ns ## COG: SP0846 COG3845 # Protein_GI_number: 15900733 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport systems, ATPase components # Organism: Streptococcus pneumoniae TIGR4 # 5 512 4 511 511 673 71.0 0 MSQEENVIEMRKITKEFGTFKANDQIDLQVKPGEIHALLGENGAGKSTLMNILSGLLEPT SGEIYMNGEKVNITSPTAANRLGIGMVHQHFMLVEAFTVTENIILGSEPTHGGILDRKKA KKEIEEVSKQYGLDVNPNAYIRDISVGMQQRVEILKTLYRGANVLIFDEPTAVLTPQEID ELMIILKELTDEGKSIILITHKLDEIKKVADRCTVIRRGQSIGTVNVKDVSSQQLADMMV GRSVSFKTEKKPAQPKETILSIKDLVVKESRGLDAVKNLSLDVRAGEVVGIAGIDGNGQT ELIQALAGLTKVEKGSIHLNEKEITNRKPREITEMGVAHVPEDRHKYGLVLEMTLAENIG LQTYYQKPYSSTGILNYRMINKHARELIEEYDVRTPNELVPARALSGGNQQKAIIAREVD RDPDLLIVSQPTRGLDVGAIEYIHRRLIEQRDKNKAVLLVSFELDEILNVSDRIAVIHAG EIVGIVDPKETTENELGLLMAGYSLEEARAELSKVEAGETVE >gi|237663577|gb|GG668941.1| GENE 32 24736 - 25869 1241 377 aa, chain + ## HITS:1 COG:SP0847 KEGG:ns NR:ns ## COG: SP0847 COG4603 # Protein_GI_number: 15900734 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 5 349 2 345 352 342 58.0 9e-94 MNNRSEKIRNILVPVLSVIMGFLLGAIIMVIFGYDPVAGYQAMFETAFQGKKSIGEIFVT AAPLIFTALGFSVANSAGFFNIGLSGQALCGWVASIWVALSMPDAPRMIALPVAIIVGAV AGALAAAIPGFLRAYFGTSEVIVTIMLNYILLYTGNHIANNVMKPSIMANKGITKMIGAN ASLRSPFLTSISDGSRLNIGIFLAFIFLILVWFLMKKTTLGFEIRSVGLNPFASEYAGMS SKRTIILSMMISGTLAGLGGAVQGLGTFQNFFIQNTSLSIGFDGMAVSLLGAGSSIGILL SALLFGMLKLGGQGMPLIAGVPTELVDVVIAAIIFFVGISYLIRFLLAKASGSKKEVAIV ETIEAAPDKNNQEGGDI >gi|237663577|gb|GG668941.1| GENE 33 25869 - 26822 1096 317 aa, chain + ## HITS:1 COG:SPy1225 KEGG:ns NR:ns ## COG: SPy1225 COG1079 # Protein_GI_number: 15675189 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 317 1 318 318 395 68.0 1e-110 MDLATISSIITQTLVYATPLILTALGGTFSERSGVVNVGLEGIMVMGAFSSVVFNLTFAD TFGAATPWIACLVGGLVGIVFSLLHAVATINLRADHIISGTVINLMAPALGVFLVKVIYQ KGQTDMITQSFGYFSFPGLSKIPVIGELFFAKTSLPAFVAILIAILAWFVIYKTRFGLRL RSVGEHPQAADTLGINVYLMRYSGVLLSGFLGGMGGAVFAQSIAGRFGITTIAGQGFISM AAMIFGKWNPLGAMGAALFFGFAQNLSIAGENLPIISEIPKVYLQAAPYVLTILVLVVFF GKSSGPKANGKNYVKTK >gi|237663577|gb|GG668941.1| GENE 34 27132 - 28298 1402 388 aa, chain + ## HITS:1 COG:SA0134 KEGG:ns NR:ns ## COG: SA0134 COG1015 # Protein_GI_number: 15925843 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Staphylococcus aureus N315 # 2 388 5 392 392 545 69.0 1e-155 MFKRVHLIVLDSVGIGEAPDAEKFGDVGSDTLGHIAKEAGLTIPHLEKLGLGTIAPLTGV KAVADHDGYATKLEEISVGKDTMTGHWEIMGLNIKKPFRVFPNGFPEELLKQIEDFSGRK VVCNKPYSGTAVIDDYGEHQMKTGDLIVYTSADPVLQIAAHEDIIPLEELYKICQYVRDI TKDEPYMIGRIIARPYVGEPGNFTRTSNRHDYALDPFGHTVLDSLKENGNDVIAVGKIND IFNGQGITEAIRTKSNMDGVDQLLTVMNKDFTGLSFTNLVDFDALYGHRRDVKGYAKAIE DFDGRLPEIMAAMAEDDLLLITADHGNDPTFPGTDHTREYVPLLAYSKKMTKQGSLPQGF YSDISATIAENFEVPATENGQSFLNQLQ >gi|237663577|gb|GG668941.1| GENE 35 28315 - 29133 1113 272 aa, chain + ## HITS:1 COG:SPy0892 KEGG:ns NR:ns ## COG: SPy0892 COG0005 # Protein_GI_number: 15674917 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Streptococcus pyogenes M1 GAS # 3 272 2 269 269 341 64.0 7e-94 MTTLTNHLNETTEFLKEKGVQQADFGLILGSGLGELANEITDAIAIPFSEIPHFSVSTVV GHAGQLVYGTLSGKKVLAMQGRFHYYEGHSMQTVTYPVRVMAALGIHSMIVTNAAGGVNE TYTPGNLMLINDHINFTGDNPLIGENDEEIGPRFPDMSHAYTQEYREVAKKVAAEQNIDL KEGVYMGFSGPTYETPAEIRMSRTMGADAVGMSTVSEVIVAVHSGMKVLGISCITNLAAG MQSSLNHAEVVETTERVKGQFKELVKATLAAL >gi|237663577|gb|GG668941.1| GENE 36 29152 - 29859 964 235 aa, chain + ## HITS:1 COG:L156559 KEGG:ns NR:ns ## COG: L156559 COG0813 # Protein_GI_number: 15672913 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Lactococcus lactis # 4 234 5 233 234 311 67.0 6e-85 MSVHIEAKPGEIADKILLPGDPLRAKYIAETFLENPVCYNQVRGMLGYTGTYKGQRVSVQ GTGMGMPSAGIYAHELINSYDVKKLIRVGTCGSISEKVNVRELVIAQAAATPSSAIRNDF PKYDFPQIASFDLLLKSYEIAKAKGFTTHVGNVLSDDVFYKDSLDDVFRLGRYGVLAIEM EAAMLYYLAAKFDVEALAIMTVSDSLVTGEETTAEERQTTFNEMIEVGLETAIAN >gi|237663577|gb|GG668941.1| GENE 37 29898 - 30836 1215 312 aa, chain - ## HITS:1 COG:lin2073 KEGG:ns NR:ns ## COG: lin2073 COG0614 # Protein_GI_number: 16801139 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Listeria innocua # 22 311 19 310 313 97 26.0 4e-20 MKLLKKTVLIGTTLLLGSFLLAACGNTNKEANNADKTHEVTDTLGNKVTVPAKPKRIIAS YLEDYLVALGEKPVAQWTVGQGSIQDYLAKELKDVPTISYDLPYEAVLKFEPDLLLISSS ALVEGGKYKEYSKIAPTYVVKNGENVTWRDQLEDIATVLDKKEQAKKVLEDYDTLTKGVQ EDLGKKDAGKSAAVLWVTNNQVFMVSDNRSSGTVLYQDLGLQVPKLVEEISKNATADWNQ VSLEKLAELDADHIFLVNSDESAPLFQEAIWKNLPAVKNNQVHTYDKKSSWLYNGPIANT QIVEDVKKALLN >gi|237663577|gb|GG668941.1| GENE 38 30760 - 30936 78 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|315143253|gb|EFT87269.1| ## NR: gi|315143253|gb|EFT87269.1| hypothetical protein HMPREF9495_02937 [Enterococcus faecalis TX2141] # 1 58 1 58 58 103 96.0 4e-21 MQLICSKKQAMIDKRSFLTDNENRYQLKIKELHNETFKKDGPNWYHPSSWFILTRSLW >gi|237663577|gb|GG668941.1| GENE 39 31072 - 31872 260 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 227 2 226 245 104 30 1e-21 MNYLEAEDLTTGYGRQVISEALNCSFESGTITSIIGPNGCGKSTLLKTLARILPAEKGKV FIKNQELQHFSSKEVAQELAILSQTPENTIDLSVFDLVSFGRYPYQSGWKSVTTEDQEYI QWALELTGLTELARESVAILSGGQRQRVWIAMALVQDTDILILDEPTTYLDPAHQLEILN VLKRINQEHQKTIVMTIHDINLASRFSDRVIAMKEGKIINEGTPQEVITVTGLADVFAIQ AEISYHSQTQRPLVLSYELMEMELDG >gi|237663577|gb|GG668941.1| GENE 40 31959 - 32879 772 306 aa, chain + ## HITS:1 COG:lin2072 KEGG:ns NR:ns ## COG: lin2072 COG0609 # Protein_GI_number: 16801138 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Listeria innocua # 3 301 38 336 341 260 46.0 2e-69 MFGATSVSIQTIIESFTHFDATNQAHQVIQTVRLPRILGAAFVGASLAVSGALAQGITQN PLADSGLLGINAGAGLGLALVFAFLPQASYWWLLVVSFLGAGVSVALIYYLSNHSIRGAS PMRLTLVGAGISALFLSFSQFLAIQFNLSQELTFWFLGGVSVISWAQLKIVVPIFLGAFA LAILISPSVTILRFGDDATIGLGRNPQRIRLFASITILLLSGLSVALVGSVSFVGLVVPH VMRTVSGENYRRLIPFSALGGALLVLVADLIARMVNPPFETPFGIITALIGIPFFLYLFR KGGQLG >gi|237663577|gb|GG668941.1| GENE 41 32876 - 33880 947 334 aa, chain + ## HITS:1 COG:SA0604 KEGG:ns NR:ns ## COG: SA0604 COG0609 # Protein_GI_number: 15926326 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Staphylococcus aureus N315 # 10 332 14 337 338 242 41.0 9e-64 MTQKKVSRWVAVLIVGIILTACISLTQGELSVSVMDLKALLLGQGSQAKQLLVWDFRLPR IVLAVLSGAALGLSGAILQGITRNPLADTGILGINAGAGLAVILFISFVETTSITTFALP LVALVGGLLAAVGILVIAYHHRLGLTPVRMVLAGVILSTGISALTLLITSKIDTEKYRFV TMWQAGSIWGSNWFFVGALLPWLVIGFFFAMKRHRLLDILQLGDETAISVGIAVKKERIV SLLLAVMLAASAISVTGGINFLGLLAPHIARKCGFTQQKQVLPLAALFGSLLLLVSDTIG RLLPGNGEMPAGIIVAIIGAPYFLYLLIKTSDSL >gi|237663577|gb|GG668941.1| GENE 42 34009 - 35196 1552 395 aa, chain + ## HITS:1 COG:CAC3299 KEGG:ns NR:ns ## COG: CAC3299 COG1979 # Protein_GI_number: 15896543 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 1 386 1 386 389 433 55.0 1e-121 MENFNFYVPTDIRFGKDRLDELPAVLDQFGKNVLLVYGGGSIKRNGLYQQITDLAQKNGH TLIELSGVEPNPRIETVRKGIELCKENQVDVILAVGGGSTIDCSKAIAAGFYSEEDIWTV IAARKGYTGPALPIVTILTLAATGSEMNAGAVISNLETNQKLGFGGPNMIPKVSFLDPTN TFTVPQNQTAAGSADIFSHLIENYFSISTGTDVQDFVSEGLMRTVIKNCPIALENPEDYD ARANLMWASSLALNGLTGRGKQGVWSCHPMEHELSAFYDITHGIGLAILTPRWMNYVLSE QTVGKFAQFARNVWGIVEQEEEVAAKKGIQALYDYFVACGIPMTLPEVGIEADKFEEMAQ QAVAHSAIAEKAYVPLYAADIVAIYKDCLTESQFI >gi|237663577|gb|GG668941.1| GENE 43 35253 - 35939 869 228 aa, chain - ## HITS:1 COG:NMA1801 KEGG:ns NR:ns ## COG: NMA1801 COG0588 # Protein_GI_number: 15794692 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Neisseria meningitidis Z2491 # 3 228 2 227 227 334 73.0 8e-92 MPKLVFSRHGLSEWNALNQFTGWADVDLAPEGVEEAKEGGRKIKEAGIEFDVAYTSVLTR AIKTCNYLLEYSDQLWVPQIKSWRLNERHYGKLQGLNKKETAEKYGDEQVHIWRRSYDTL PPLMEATDEGSAANDRRYAMLDQRDIPGGENLKVTLERALPFWQDEIAPALKDNKTVLVA AHGNSLRALAKHIEGISDEDIMDLEIPTGKPLVYELNDDLTVKEKYYL >gi|237663577|gb|GG668941.1| GENE 44 36114 - 36689 536 191 aa, chain - ## HITS:1 COG:STM2772 KEGG:ns NR:ns ## COG: STM2772 COG1961 # Protein_GI_number: 16766084 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Salmonella typhimurium LT2 # 1 178 1 179 190 103 34.0 2e-22 MKRIGYARTTIIEDDLKNQLTTLQSFGCDDIFQETFDPQAEISVLDEVEKLLSAGDTLIV CKLHHLGKTTRQLTDFMKMLKEKQVDFVSISEGIDTHLPTGEAYFQLMESLSAMECALIK ERTLVGLHKARENGKVGGRPKIDGRTVRKIRALYYENKETIQFISNKCGVSVGTCYKYIN LPETDVERLYS >gi|237663577|gb|GG668941.1| GENE 45 36731 - 37411 814 226 aa, chain - ## HITS:1 COG:L0045 KEGG:ns NR:ns ## COG: L0045 COG0120 # Protein_GI_number: 15674215 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Lactococcus lactis # 2 222 3 223 224 259 61.0 3e-69 MNLKQMVGIEAAKYVEDGMIVGLGTGSTAKFMVDEIGRRVKEEGLSIVGVTTSKETEKQA LALGIPLKGIDEVPYVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKS KMVDDLGAFPLPVEVVPYGSCQLVHLFEEKGYHPALRLNAAGETLITDGGHHIIDLHLEK ITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDGPKTLHVPAR >gi|237663577|gb|GG668941.1| GENE 46 37756 - 38169 706 137 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374844|ref|NP_813997.1| 30S ribosomal protein S12 [Enterococcus faecalis V583] # 1 137 1 137 137 276 100 3e-73 MPTINQLVRKPRKSKVEKSDSPALNKGYNSFKKTQTNVNSPQKRGVCTRVGTMTPKKPNS ALRKYARVRLSNLIEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIVRGALDTAGV NDRKQSRSKYGTKRPKA >gi|237663577|gb|GG668941.1| GENE 47 38225 - 38695 806 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374845|ref|NP_813998.1| 30S ribosomal protein S7 [Enterococcus faecalis V583] # 1 156 1 156 156 315 100 7e-85 MPRKGPVAKRDVLPDPIYNSKLVTRLINRVMVDGKRGIAANIIYNSFDIIKESTGNDPLE VFEQAMKNVMPVLEVKARRVGGSNYQVPVEVRPERRTTLGLRWVVNYARLRGEHTMEERL AKEIMDAANNTGASVKKREDTHKMADANRAFAHYRW >gi|237663577|gb|GG668941.1| GENE 48 38779 - 40860 2439 693 aa, chain + ## HITS:1 COG:SPy0273 KEGG:ns NR:ns ## COG: SPy0273 COG0480 # Protein_GI_number: 15674452 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Streptococcus pyogenes M1 GAS # 1 691 1 691 692 1188 87.0 0 MAREFSLEKTRNIGIMAHVDAGKTTTTERILYYTGKIHKIGETHEGASQMDWMEQEQERG ITITSAATTAQWKGYRVNIIDTPGHVDFTIEVQRSLRVLDGAVTVLDSQSGVEPQTETVW RQATEYKVPRIVFCNKMDKIGADFFYSVESLHDRLQANAHPIQIPIGAEEDFTGIIDLIK MKAEIYTNDLGTDIQETDIPEDYLEKAQEWREKLVEAVAETDEDLMMKYLEGEEITEEEL VAGIRQATINVEFFPVLAGSAFKNKGVQLMLDAVLDYLPSPLDIDAIKGIDTKTDEETTR PADDEAPFASLAFKVMTDPFVGRLTFFRVYSGVLESGSYVLNASKGKKERIGRILQMHAN TRQEIDKVYSGDIAAAVGLKDTTTGDTLCALDAPVILESIEFPDPVIQVAVEPKSKADQD KMGVALQKLAEEDPSFRVETNVETGETVISGMGELHLDVLVDRMKREFKVEANVGAPQVS YRETFRAATKAEGKFVRQSGGKGQYGHVWVEFTPNEEGKGFEFENAIVGGVVPREYIPAV EKGLEDSMNNGVLAGYPLVDIKAKLYDGSYHDVDSNETAFRVAASMALKAAAKNANPVIL EPMMKVTITVPEDYLGDIMGHVTSRRGRVEGMEAHGNSQIVNAMVPLAEMFGYATTLRSA TQGRGTFMMVFDHYEDVPKSVQEEIIKKNGGNA >gi|237663577|gb|GG668941.1| GENE 49 41011 - 42198 1486 395 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 395 1 407 407 577 70 1e-163 MAKEKFDRSKSHVNIGTIGHVDHGKTTLTAAIATVLSKHGGGEAQSYDSIDNAPEEKERG ITINTSHIEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI LLSRNVGVPYIVVFLNKMDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALE GDESYEEKILELMAAVDEYIPTPERDTDKPFMMPVEDVFSITGRGTVATGRVERGEVRVG DEVEIVGIKDETSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDIERGQVLAKPATI TPHTKFKAEVYVLSKEEGGRHTPFFTNYRPQFYFRTTDVTGVVELPEGTEMVMPGDNVAM DVELIHPIAIEDGTRFSIREGGRTVGSGVVTEIVK >gi|237663577|gb|GG668941.1| GENE 50 42379 - 43203 1020 274 aa, chain + ## HITS:1 COG:lin0667 KEGG:ns NR:ns ## COG: lin0667 COG0351 # Protein_GI_number: 16799742 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Listeria innocua # 1 269 3 271 271 291 54.0 9e-79 MEKVLSIAGSDSTGGAGIQADLKTFEEYGVFGFSSLTSIVTMDPTTGWSHEVTELPETLL EKQLISVFAGGPVAALKTGMMGNEQNIKMASKYIKQEKIQKVVIDPVIACKGTAQILQPK SVEGLKKDLLPLALVATPNLIEAGILSGLGEISSVAEMEEAAKRIVQMGAKHVVVKGGHR LAGEKALDLFYDGHTAHLLENELYPTDYNHGAGCTFSAAITAGLAKGYSVLEAVTLAKKF VAAAIKHGIQVNPYVGHVWHGAYTHAEQRMRKKA >gi|237663577|gb|GG668941.1| GENE 51 43475 - 44641 1103 388 aa, chain + ## HITS:1 COG:CAC0877 KEGG:ns NR:ns ## COG: CAC0877 COG2230 # Protein_GI_number: 15894164 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Clostridium acetobutylicum # 7 386 8 386 391 402 52.0 1e-112 MLEKETYSQLFKWSFSKKTQVTYWDGTVKEYGQGSGDPVFKIVFNEKIPVKDLLNNASLT LGEAYMDRKIEIEGDIQALIYDVYNQKDSFLHNAKFIKWLPKESHSKKRSQEDIHSHYDL GNDFYKKWLDQTMTYSCAYFKTPEDTLEQAQVNKVHHILDKLFIKEGDTLLDIGCGWGTL ILTAVKEYGAKATGITLSEEQFHHIRHIIEKEGLQDRMTVKLMDYRDLKGESFDHITSVG MFEHVGAENLHEYFDVVQRNLAPKGTALIHGISRQQGGAKNAWINRYIFPGGYIPGVTEL VGHMTENDLQVIDLESLRRDYQLTLEHWTKNFHNIEAEIVDEKGERFYRMWDLYLQACAA SFQASNIDVIQYLLVHPDNNDIPMRRIG >gi|237663577|gb|GG668941.1| GENE 52 44711 - 44845 48 44 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227515486|ref|ZP_03945535.1| ribosomal protein S10 [Lactobacillus fermentum ATCC 14931] # 1 40 14 54 208 23 39 4e-53 RMKRIEKQNKCFSKQEKILSKKRRKSLLTLSFHSIIKKVLFTGV >gi|237663577|gb|GG668941.1| GENE 53 44852 - 44923 60 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVDQRFDLPAVKREVATRSDALP >gi|237663577|gb|GG668941.1| GENE 54 44955 - 45299 576 114 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227519991|ref|ZP_03950040.1| 30S ribosomal protein S10 [Enterococcus faecalis TX0104] # 1 114 1 114 114 226 100 3e-58 MSTFKIGEGGNKMAKQKIRIRLKAYEHRILDQSADKIVETAKRTGADVSGPIPLPTERSL YTVIRATHKYKDSREQFEMRTHKRLIDIVNPTPKTVDALMKLDLPSGVNIEIKL >gi|237663577|gb|GG668941.1| GENE 55 45321 - 45950 1059 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374851|ref|NP_814004.1| 50S ribosomal protein L3 [Enterococcus faecalis V583] # 1 209 1 209 209 412 100 1e-114 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTVETDGYEAIQVGYQDKREVL SNKPAKGHVAKANTAPKRFIKEFKNVELGEYEVGKEIKVDVFQAGDVVDVTGTTKGKGFQ GAIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRVFKNKRLAGRMGGDRVTIQNLEVVKVD VERNVILIKGNIPGAKKSLITIKSAVKAK >gi|237663577|gb|GG668941.1| GENE 56 45976 - 46599 1033 207 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227519993|ref|ZP_03950042.1| 50S ribosomal protein L4 [Enterococcus faecalis TX0104] # 1 207 1 207 207 402 100 1e-111 MPNVALFKQDGTQNGEITLNEEIFGIEPNESVVYDAIIMQRASLRQGTHAVKNRSAVRGG GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSDKVAE NNLVAVEGLSFDAPKTKEFKQVLANLSIDTKVLVVLENGNDFAALSARNLPNVSVVTSDN VSVLDVVSANKVLATQTALTQIEEVLA >gi|237663577|gb|GG668941.1| GENE 57 46599 - 46889 471 96 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374853|ref|NP_814006.1| ribosomal protein L23 [Enterococcus faecalis V583] # 1 96 1 96 96 186 100 5e-46 MELLDVIKRPVITEKSMLAMDEKKYTFEVDTRANKTLVKQAVESAFDVKVANVNILNVRP KFKRMGKYAGYTKKRRKAIVTLTEDSKEIQLFEAAE >gi|237663577|gb|GG668941.1| GENE 58 46929 - 47759 1431 276 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374854|ref|NP_814007.1| 50S ribosomal protein L2 [Enterococcus faecalis V583] # 1 276 1 276 276 555 99 1e-157 MAIKKYKPTTNGRRNMTSSDFAEITTSTPEKSLLQPLKNNAGRNNNGRITVRHQGGGHKR QYRVIDFKRNKDNVAAVVKTIEYDPNRSANIALVHYEDGVKAYILAPKGLEVGMRLVSGP EADIKVGNALPLENIPVGTVIHNIEMKPGKGGQLIRSAGTSAQVLGKEGKYVLIRLNSGE VRMILATCRATIGSVGNEQHELINIGKAGRSRWMRKRPTVRGSVMNPNDHPHGGGEGKTP IGRKAPVSPWGQPAIGYKTRNKKAKSDKLIVRRRTK >gi|237663577|gb|GG668941.1| GENE 59 47802 - 48080 486 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374855|ref|NP_814008.1| 30S ribosomal protein S19 [Enterococcus faecalis V583] # 1 92 1 92 92 191 100 9e-48 MGRSLKKGPFVDDHLMKKVEAQQGAEKKKVIKTWSRRSTIFPSFVGFTIAVYDGRKHVPV YIQEDMVGHKLGEFAPTRTYRGHVADDKKTKR >gi|237663577|gb|GG668941.1| GENE 60 48096 - 48449 564 117 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227519997|ref|ZP_03950046.1| 50S ribosomal protein L22 [Enterococcus faecalis TX0104] # 1 117 1 117 117 221 100 8e-57 MQMSEQITSAKATAKTVRTSPRKARLVIDLIRGKSVADAISILKFTPNKSAGIIEKVLMS AVANAENNFDLDVESLVVSEAFVNEGPTMKRFRPRAKGSASPINKRTSHITVVVTEK >gi|237663577|gb|GG668941.1| GENE 61 48516 - 49172 1112 218 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374857|ref|NP_814010.1| 30S ribosomal protein S3 [Enterococcus faecalis V583] # 1 218 1 218 218 432 99 1e-120 MGQKVHPIGMRVGIIRDWDAKWYAEKEYAEFLHEDLRIRKFIATKLADAAVSTIEIERAA NRVNISIHTAKPGMVIGKGGSEVENLRKELNKLTGKRVHINIVEIKKPDLDAKLVGEGIA RQLENRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRAD IDYAWEEADTTYGKLGVKVWIYRGEILPTKKNTEKGGK >gi|237663577|gb|GG668941.1| GENE 62 49175 - 49609 753 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374858|ref|NP_814011.1| 50S ribosomal protein L16 [Enterococcus faecalis V583] # 1 144 1 144 144 294 100 1e-78 MLVPKRVKHRREFRGKMRGEAKGGKEVAFGEWGLQATESHWITNRQIEAARIAMTRYMKR GGKVWIKIFPHKSYTSKAIGVRMGKGKGAPEGWVSPVKRGKIMFEIAGVPEEVAREALRL ASHKLPVKTKIVKREEMGGESNEG >gi|237663577|gb|GG668941.1| GENE 63 49599 - 49787 296 62 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374859|ref|NP_814012.1| ribosomal protein L29 [Enterococcus faecalis V583] # 1 62 1 62 62 118 100 1e-25 MKVKEIRELTTAEMLDKEKQLKEELFNLRFQLATGQLENTARIKEVRQSIARIKTVLREQ AN >gi|237663577|gb|GG668941.1| GENE 64 49790 - 50077 476 95 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227520001|ref|ZP_03950050.1| 30S ribosomal protein S17 [Enterococcus faecalis TX0104] # 1 95 1 95 95 187 98 1e-46 MEGGQTRMTEERNQRKVYQGRVVSDKMDKTITVVVETKKNHPIYGKRMKYSKKYKAHDEN NTAKVGDIVKIMETRPLSATKRFRLLEVVEEAVII >gi|237663577|gb|GG668941.1| GENE 65 50135 - 50503 591 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374861|ref|NP_814014.1| ribosomal protein L14 [Enterococcus faecalis V583] # 1 122 1 122 122 232 99 6e-60 MIQQESRLRVADNSGAREILTIKVLGGSGRKTANIGDVIVATVKQATPGGVVKKGEVVKA VIVRTKSGARRADGSYIKFDENAAVIIRDDKSPRGTRIFGPVARELRENNFMKIVSLAPE VL >gi|237663577|gb|GG668941.1| GENE 66 50539 - 50850 517 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374862|ref|NP_814015.1| 50S ribosomal protein L24 [Enterococcus faecalis V583] # 1 103 1 103 103 203 100 2e-51 MFVKKGDKVKVITGKDKNKEGVVLAAFPKQDKVIVEGVNVVKKHQKPNQAAPQGGILEVE APIHVSNVMVIDPSNGEATKVAFKEVDGKKVRVSKKTGEVLDK >gi|237663577|gb|GG668941.1| GENE 67 50876 - 51415 896 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374863|ref|NP_814016.1| 50S ribosomal protein L5 [Enterococcus faecalis V583] # 1 179 1 179 179 349 100 3e-95 MNRLKEKYIKEVTPSLVEKFNYSSVMQTPKVDKIVINMGVGDAVSNAKNLDKAVEELALI TGQKPLITKAKKSIAGFRLREGMPIGAKVTLRGERMYEFLDKLVTVSLPRVRDFHGVSKK AFDGRGNYTLGIKEQLIFPEVDYDLVDKVRGMDIVIVTTANTDEESRELLAQLGMPFQK >gi|237663577|gb|GG668941.1| GENE 68 51434 - 51619 333 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374864|ref|NP_814017.1| 30S ribosomal protein S14 [Enterococcus faecalis V583] # 1 61 1 61 61 132 98 5e-30 MAKKSMIAKNKRPAKHSTQAYTRCERCGRPHSVYRKFHLCRICFRELAYKGQIPGVKKAS W >gi|237663577|gb|GG668941.1| GENE 69 51655 - 52053 660 132 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374865|ref|NP_814018.1| 30S ribosomal protein S8 [Enterococcus faecalis V583] # 1 132 1 132 132 258 100 6e-68 MVMTDPIADFLTRIRNANMVKHETLEVPASKIKRDIAEILKREGFIRDVEYIEDDKQGVI RVFLKYGKNEERVITNLKRISKPGLRAYVKADEVPKVLNGLGIAIISTSEGVITDKEARA KNIGGEVIAYVW >gi|237663577|gb|GG668941.1| GENE 70 52085 - 52621 909 178 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227520007|ref|ZP_03950056.1| 50S ribosomal protein L6 [Enterococcus faecalis TX0104] # 1 178 1 178 178 354 99 8e-97 MSRIGNKVVVLPAGVEIKQDGNNITVKGPKGELTREFSSDIKMNIEGNEVTFTRPNDSKE MKTIHGTTRANFNNMVVGVSEGFQKALELIGVGYRAQVQGNKLTLNVGYSHPVEMTAPEG VTFEVPANTQVIVKGINKEVVGELAANIRGVRPPEPYKGKGIRYVGEFVRRKEGKTGK >gi|237663577|gb|GG668941.1| GENE 71 52773 - 53138 599 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227520008|ref|ZP_03950057.1| 50S ribosomal protein L18 [Enterococcus faecalis TX0104] # 1 121 1 121 121 235 99 7e-61 MKIVITKPDKNKTRQKRHRRVRNKISGTAECPRLNIFRSNKNIYAQVIDDVAGVTLASAS ALDKEISGGTKTETAAAVGKLVAERAAEKGIKKVVFDRGGYLYHGRVQALAEAARENGLE F >gi|237663577|gb|GG668941.1| GENE 72 53159 - 53659 817 166 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374868|ref|NP_814021.1| ribosomal protein S5 [Enterococcus faecalis V583] # 1 166 1 166 166 319 100 4e-86 MVYIDPKHLELEDRVVAINRVTKVVKGGRRLRFAALVVVGDKNGHVGFGTGKAQEVPEAI RKAIEDAKKNLVEVPMVGSTIPHEVIGVFGGGRILMKPAVEGSGVAAGGPVRAVLELAGV ADITSKSLGSNTPINVVRATVEGLKQLKRAEEVAALRGKSVEEIIG >gi|237663577|gb|GG668941.1| GENE 73 53674 - 53853 286 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374869|ref|NP_814022.1| ribosomal protein L30 [Enterococcus faecalis V583] # 1 59 1 59 59 114 100 1e-24 MAELKITLKRSVIGRPQNQRATVKALGLGKVNSTVTKPANEAIKGMVNTISHLVDVEEV >gi|237663577|gb|GG668941.1| GENE 74 53901 - 54341 731 146 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374870|ref|NP_814023.1| 50S ribosomal protein L15 [Enterococcus faecalis V583] # 1 146 1 146 146 286 100 4e-76 MKLHELKPAEGSRQVRNRVGRGTSSGNGKTAGRGQKGQKARSGGGVRLGFEGGQTPLFRR LPKRGFTNINRKDYAVVNLDTLNRFEDGTEVTPVVLKEAGIVKNEKAGIKVLADGELTKK LTVKAAKFSKSAQEAIEAAGGSIEVI >gi|237663577|gb|GG668941.1| GENE 75 54342 - 55640 761 432 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 10 432 19 439 447 297 38 1e-79 MFKLLKNAFKVKDIRSKILFTVLILFVFRLGAHITVPGVNAKGLSDLSSLPFLNMLNMVS GSAMQNFSIFSMGVSPYITASIIIQLLQMDIVPRFVEWSKQGEVGRKKLNQATRYLTIVL GVAQSMGITAGFNSLSQTGIVNNPTLGTFVMIAVILTAGTMFVTWMGEQITEKGIGNGVS MIIFAGIISRLPGAVKEIYEDYFVNIEPSRIWQSVIFIAILVIAILVIVTVVTFFQQAER KIPIQYTKRVSGAPTSSYLPLKVNAAGVIPVIFASSLIATPNAILQAFSSKFAGENWYDI MTKIFSYNTVPGAIIYTVLIVAFTFFYAFVQVNPEKLAENLQKQGSYIPSVRPGKGTEEY VSGVLMRLSVVGSIFLGLVALLPIIAQMVWNLPQSIGLGGTSLLIVIGVALETTKQLEGL MMKRQYVGFINK >gi|237663577|gb|GG668941.1| GENE 76 55727 - 56377 801 216 aa, chain + ## HITS:1 COG:L140714 KEGG:ns NR:ns ## COG: L140714 COG0563 # Protein_GI_number: 15674059 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Lactococcus lactis # 1 213 1 214 215 300 68.0 9e-82 MNLILMGLPGAGKGTQAEKIIDTYGIPHISTGDMFRAAMKNETALGLEAKSYIDKGELVP DEVTNGIVKERLAEPDTDKGFLLDGFPRTLDQAKALDTMLKELNKKIDAVIDIHVEEDVL IERLAGRFICRTCGATYHKLFNPPKVEGTCDRCGGHEFYQREDDKPETVKNRLAVNIESS APILAFYKEQGLMHTIDGNREIDTVFSDVKKIIDEN >gi|237663577|gb|GG668941.1| GENE 77 56588 - 56806 311 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 124 81 2e-27 MAKEDMIEVEGTVVETLPNAMFKVELENGHQVLATVSGKIRMHYIRILPGDKVTVELSPY DLTRGRITYRFK >gi|237663577|gb|GG668941.1| GENE 78 56839 - 56955 210 38 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374874|ref|NP_814027.1| 50S ribosomal protein L36 [Enterococcus faecalis V583] # 1 38 1 38 38 85 100 9e-16 MKVRPSVKPMCEHCKVIRRKGRVMVICPANPKHKQRQG >gi|237663577|gb|GG668941.1| GENE 79 56975 - 57340 606 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374875|ref|NP_814028.1| 30S ribosomal protein S13 [Enterococcus faecalis V583] # 1 121 1 121 121 238 100 1e-61 MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKKVLANVGVSEDVRVRDLTNEQTDAIRAEI DKLKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPTRGQNTKNNARTRKGPTKTVAGKK K >gi|237663577|gb|GG668941.1| GENE 80 57368 - 57757 654 129 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374876|ref|NP_814029.1| 30S ribosomal protein S11 [Enterococcus faecalis V583] # 1 129 1 129 129 256 100 3e-67 MAAKKVSRKRRVKKNIESGVAHIHSTFNNTIVMITDTHGNALAWSSAGSLGFKGSKKSTP FAAQMAAEAATKVAMEHGLKTVDVTVKGPGSGREAAIRSLQATGLEVTAIRDVTPVPHNG CRPPKRRRV >gi|237663577|gb|GG668941.1| GENE 81 57838 - 58776 1072 312 aa, chain + ## HITS:1 COG:BS_rpoA KEGG:ns NR:ns ## COG: BS_rpoA COG0202 # Protein_GI_number: 16077211 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Bacillus subtilis # 1 312 1 314 314 431 74.0 1e-121 MIEFEKPRIEKIDENRDYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAITNIQIDGVL HEFSTIPGVREDVTQIILNIKGLALKLYAEEEKTLEIDITGPATVTAGDIIVDSDVEILN KDLVICSVAEGATFHARLTVKPGRGYVQADENKKEDMPIGVLPVDSIYTPVRRVNYQVEN TRVGRRDDFDKLTMEIWTDGSIIPQEALSLAAKIMTEHLDIFVNLTDEAKNAEIMVEKEE TQKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKSEPEMIKVRNLGRKSLEEVKLK LHDLGLGLRKDD >gi|237663577|gb|GG668941.1| GENE 82 58850 - 59233 618 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|29374878|ref|NP_814031.1| 50S ribosomal protein L17 [Enterococcus faecalis V583] # 1 127 1 127 127 242 99 5e-63 MSYRKLGRTSSQRKAMLRDITTDLIINERIVTTEARAKEVRSTVEKMITLGKRGDLHARR QAATFVRNEVASVREEDESIVVESALQKLFNDLGPRFAERQGGYTRILKTEPRRGDAAPM VVIEFVK >gi|237663577|gb|GG668941.1| GENE 83 59509 - 60708 1297 399 aa, chain + ## HITS:1 COG:no KEGG:EF0235 NR:ns ## KEGG: EF0235 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 399 1 399 399 659 100.0 0 MSQMFAFSLLMVILYIGDVVSIKTKAWIPSVFVCGVLFILGYWTIFPQNIVEVAGIPTVV ATLLMYLLITNMGTLLSVKELVNQWKTIVIALSGILGIIALLLAVGTFVFDLKTVLVAIP PLVGGLVSSLVMSEAAQSAGLASLSVLAILIYVIQGFAGYPLTSIVLKKEGKRKLQEYRA GTWQPVHEQEGQETGAEPDVPKLFEKVPKRYHTDYSRILRLALVATLAYYVSVWTAPFVT ISPFVLCLCFGVIATSLGFLEKQPLQKANSFGFAILGLMLFVFDGLKQATPEMLMDLFLP MIGIIVIGVIGMYIFSAIVGRVLGVSKEMAFAVSLTALYGFPADYIITNEVIQSLTEDEQ EQAALTSHLMPPMLVAGFVTVTIVSVILAGIFSSILLSL >gi|237663577|gb|GG668941.1| GENE 84 60724 - 61899 1201 391 aa, chain + ## HITS:1 COG:lin0542 KEGG:ns NR:ns ## COG: lin0542 COG1473 # Protein_GI_number: 16799617 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Listeria innocua # 3 387 4 388 393 561 71.0 1e-160 MKKIKALVKQHAQEMIAFRRDLHQHPELQFEEFRTTEKVAAVLDQLGITYRKTEPTGLIA EIVGGKPGRVVALRADMDALPVQELNEDLAYKSLEAGKMHACGHDSHTAMLVTAAKVLKE IQEELQGTVRLIFQPSEENAQGAKAMVAQGAMTGVDDVFGLHIWSQMPVGTASCRAGSSF ASADIFSVDFKGRGGHGAMPNACIDAAVIASSFVMNLQTIVSRETDPLDPVVVTIGRMDV GTRFNVIAENARLEGTARCFSVATRNRVEQALQRYAEQTAAIYGGTASLDYQYGTLPVIN DEQDALFAQTLIKENFGEAALRQEEPTTGGEDFSYYTEHASGCFALVGSGNPEKDTEWAH HHGRFNIDEDAMAMGAELYAQYAFEYLKTHF >gi|237663577|gb|GG668941.1| GENE 85 62101 - 62940 1030 279 aa, chain + ## HITS:1 COG:L75718 KEGG:ns NR:ns ## COG: L75718 COG1122 # Protein_GI_number: 15672259 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Lactococcus lactis # 1 272 1 272 277 317 58.0 2e-86 MQPIIELNNIQFNYQPEDASPALKDVSFSIQQGEWVAIIGHNGSGKSTLAKTINGLLLPA AGTIKVGGKELNEANVWDIRRMVGMVFQNPDNQFVGSTVEDDVAFGLENQGIPRDEMVER VHDALERVRMLDFAKREPARLSGGQKQRVAIAGVVALRPDIIILDEATSMLDPEGRAEVI ATIQKIKEESNLTVISITHDIDEAANANRILVMRQGQLTNEGTPEKIFSAGEALVEMGLD LPFPEKLKVALKERGVVVPTNYLTEEGMVDWLWTSVLNK >gi|237663577|gb|GG668941.1| GENE 86 62916 - 63785 440 289 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 5 278 132 396 398 174 38 2e-42 MDIRFKQVDFTYQPNTPFEQRALFDINLTIQDGSYTAIVGHTGSGKSTLLQHLNALVKPT KGQVTIGERVITPETDNKNLKPIRKKVGIVFQFPEAQLFEETVERDIAFGPKNFGVSDEE AKKLAKKMLDLVGLDEKYLQHSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKG RKEMMEMFSRLHKEHNMTIVLVTHLMDDVANYADHVIVLEKGQIVRAGAPQEVFQETQWL KEKQLGVPTAAEFAEKLVAKGFSFEQLPLTADQLADQLLKKMQEAGEAK >gi|237663577|gb|GG668941.1| GENE 87 63785 - 64579 721 264 aa, chain + ## HITS:1 COG:lin2783 KEGG:ns NR:ns ## COG: lin2783 COG0619 # Protein_GI_number: 16801844 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Listeria innocua # 1 249 2 250 266 318 63.0 6e-87 MNKLIFGRYIPGDSFIHRLDPRAKLLASFYFIGIIFLANNWQSYVLIAAFTAFAISLSKI SARFFIRGVRPLLWLILFTVALQTLFTQGGEVYFQWGIISITQFGVTNGLFIFCRFVLII FMSTLLTLTTAPLELSDAIEYLLRPLRVVKFPVHEVSLMLSIALRFVPTLMDETEKIMNA QRARGVDFGEGNLLQKMKAIVPLLIPLFVSSFNRAEDLATAMEARGYQGGEGRTKYRILH WHLRDTIVMFGFVLLTIGLFVLRT >gi|237663577|gb|GG668941.1| GENE 88 64598 - 65347 809 249 aa, chain + ## HITS:1 COG:SP1599 KEGG:ns NR:ns ## COG: SP1599 COG0101 # Protein_GI_number: 15901439 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 249 1 249 249 322 63.0 6e-88 MPRYKAIIAYDGTHFHGFQKQPNERTVQEEIEKTLARMNNGRSVTVFGSGRTDAGVHAIG QVIHFDYPQERPLEKMRFALDTQTPEDIAVRSVERVSEDFHARYHVIEKTYQFKVDIGKP RSPFRRFYASYFPYPIDLEKIQQALPDLLGTHDFTSFCASGSSVEDKVRTIHEASVHVNE TGDELTFTFRGDGFLYKMIRILVGTLLKIGNGRLEPTAIPAIIAAKDRNLAGPTAHPEGL YLAEVKYEK >gi|237663577|gb|GG668941.1| GENE 89 65398 - 65709 536 103 aa, chain - ## HITS:1 COG:L158972 KEGG:ns NR:ns ## COG: L158972 COG0393 # Protein_GI_number: 15672916 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 101 5 104 108 92 53.0 1e-19 MLVTTTERISGQEYEIIGEVFGLTTRSKNMFKDLGAGLKSVVGGEIKGYTDMQREARDQA IERLKAEASKLGADAVVMMRFDSGTIGTDMQSVVAYGTAVKYI >gi|237663577|gb|GG668941.1| GENE 90 65841 - 67196 1660 451 aa, chain - ## HITS:1 COG:SA0180 KEGG:ns NR:ns ## COG: SA0180 COG1114 # Protein_GI_number: 15925890 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Staphylococcus aureus N315 # 1 428 1 428 449 457 60.0 1e-128 MQKKLVWRDYLYVGSMLFGLFFGAGNLIFPVHMGQEAGASVFLANLGFLATGIGLPFLGV IAMGVSKSSGVFDLASRINRRYALIFTLLLYLTIGPFFALPRLATTSFEIGLAPFVPKDL QWLVLAGFSALFFLAVWLFSRKPSKILDYVGKFLNPLFLALLGILIVLAFVKPLGHVASA AVGENYISSPFFKGFTEGYNTLDALASLAFGIVVVSTLRNMGVEKPGDIAKGMIKSGAFS VVLMGIIYTLLAYMGTMSIGAFPISENGGIALAQIANYYLGLPGSILLAFIVVLACLKTG IGLSTAFSETFEEMFPKVSYQKFLAIVVILPAIFANVGLTNIIQFAVPVLMFLYPLAITL MLLVIISPIFKHRREVYQATTYITLIAAVLDALNSAPTFIKDTAFVTTLLEKAGQYLPLF TIGMGWVVPATVAFLISWVWVMISKKDPILD >gi|237663577|gb|GG668941.1| GENE 91 67287 - 67778 468 163 aa, chain - ## HITS:1 COG:lin2246 KEGG:ns NR:ns ## COG: lin2246 COG0454 # Protein_GI_number: 16801311 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Listeria innocua # 5 161 1 157 157 107 36.0 1e-23 MSTSLTIRLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQ LAGFIEVHPPTSLAAHQKQWLLSIGVSPDFQGQGIGGSLLSYVKEMAQISGIHKLSLRVM ATNQEAIRFYEKHGFVQEAHFKEEFYINGHYCDDYQYAYFIEK >gi|237663577|gb|GG668941.1| GENE 92 67967 - 68536 573 189 aa, chain + ## HITS:1 COG:FN0535 KEGG:ns NR:ns ## COG: FN0535 COG1611 # Protein_GI_number: 19703870 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Fusobacterium nucleatum # 2 187 4 189 192 205 51.0 5e-53 MKKMAVYCGASLGNEPIYQQAAVALAAWMKENHYDLVYGGGNVGLMGTVADTLLAEGGEV IGVMPTFLMEREIAHNGITKMHTVSDMHARKKKMIELADVYLALPGGPGTLEEISEVISW GRVGEHMNPCILYNVNGYYDLLAAFFDKMVETSFLTEADRAKIFISDSLEEIGAFIDSYE PPMIRQYKK >gi|237663577|gb|GG668941.1| GENE 93 68581 - 69321 279 246 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 226 1 223 305 112 30 9e-24 MSAIIEIEHLRKSFGENEVLKDINMNVNKGEVVTIIGSSGSGKSTLLRCINLLEKPTDGK IIYNGKNVLERGYSLPKYRTHLGMVFQSFNLFNNMNVLENCTSGQMTVLKRNKEEAKKIA LENLEKVGMARFIDAKPAQLSGGQKQRVAIARALSMDPDVLLFDEPTSALDPEMVGEVLK TMKNLAHTGLTMVIVTHEMEFARDVSDRVIFMDKGVIAEEGTAEDIFIHPKEARTKEFLH RILTKN >gi|237663577|gb|GG668941.1| GENE 94 69333 - 70916 1965 527 aa, chain - ## HITS:1 COG:SP0453_1 KEGG:ns NR:ns ## COG: SP0453_1 COG0834 # Protein_GI_number: 15900370 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 11 330 8 325 325 300 50.0 5e-81 MNKKVFSFSLLLVTLFSLLGMTTNASAEENGEFRVGMEAGYAPFNWSQKNDAHGAVPIQG NSYAGGYDVQISKKIADGLGRKLVIVQTKWDGLAPALQSGKIDAIIAGMSPTAERKKEIA FTNPYYESQFVVIVKKDGKYANAKSLKDLADAKITAQLNTFHYGLIDQIPNVNKQQAMDN FSAMRTALASGMIDGYVSERPEGITATSVNKELKMLEFPKENGFDASAEDSQVAVGMRKG DPDIEKVNKILAGISQDERTKIMDQAIKDQPAATDSDEQKTGLINDFKNIWNQYGDMFLR GAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYIEVFRGTPM MVQAMVIFYGLALAFGISLDRTVAALFIVSVNTGAYMSEIVRGGIFAVDKGQFEAAQAIG MTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADLFFQGNAASGANFQFF QTFTIVGIMYLVMTFVITRILRVVERKMDGPSAYVKVEELTEEGKES >gi|237663577|gb|GG668941.1| GENE 95 71475 - 71771 379 98 aa, chain - ## HITS:1 COG:no KEGG:EF0248 NR:ns ## KEGG: EF0248 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 98 1 98 98 134 100.0 1e-30 MVAFIIYWAAIIACIAWGVLSIWFSVFYLSRKENGNLWAFAFFNVIAIIALAIVLLVYKT WDFGILTYSSLIYTILASLGVLTVLQAILGREPKAVKA >gi|237663577|gb|GG668941.1| GENE 96 71944 - 72657 815 237 aa, chain + ## HITS:1 COG:lin2882 KEGG:ns NR:ns ## COG: lin2882 COG0846 # Protein_GI_number: 16801942 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Listeria innocua # 17 233 12 229 229 267 55.0 1e-71 MQDITQAEAIHWLATQQKLTFLTGAGISTASGVPDYRSLKGVYQGIQQPEYLLSRTCLKT EPEKFYQFVKTLYHPDAQPNIIHQKMAQLEQMKRGKIVSQNIDGLHRKAGSQEVVDFHGN LYECYCQTCGTTVPWQDYLLSDRHADCHGQIRPAITLYEEGLSEEAIEKAIQAVASADLI VIVGTSFQVHPFCDLIHYKQPTAAILAINQTPLFLQQPYYFLEAKAETIFAELTIKE >gi|237663577|gb|GG668941.1| GENE 97 72662 - 73507 873 281 aa, chain + ## HITS:1 COG:ylaD KEGG:ns NR:ns ## COG: ylaD COG0110 # Protein_GI_number: 16128443 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 6 185 3 183 183 216 57.0 4e-56 MEEFKSEKEKMIAGTLYFASDPELVADRKKAREQMALINQQPDTYIRRQLIEETFGKVGV GTYIEPMIQFDYGYNISVGKNFYANFNNVFLDVCPIEIGDNCMFGPNVQLYTAEHPLQAA KRNSGMESGKRIIIGNNVWIGGGAIVLPGVTLGDNVVVAAGAVVTKSFPENCVIAGNPAR IIKELTEDDAPTTSLEQQRAKINQIDKELVRLLEQRMDVVAEIAAVKKKAGHAVFDSERE QQVLETILNHVENADYEETLSETFQGIMDASKRFQEKHLGE >gi|237663577|gb|GG668941.1| GENE 98 73518 - 74030 574 170 aa, chain + ## HITS:1 COG:SPy1427 KEGG:ns NR:ns ## COG: SPy1427 COG1827 # Protein_GI_number: 15675342 # Func_class: R General function prediction only # Function: Predicted small molecule binding protein (contains 3H domain) # Organism: Streptococcus pyogenes M1 GAS # 1 170 1 172 173 135 41.0 3e-32 MDGEIRRREIVKRLRETEKPISATRFAKAFDVSRQIIVGDVALLRATGVEIVATARGYML EQPLEGIERKIACQHTPEQTREELSVIVAKGGEVVDVSIAHPLYGELIGSLRIQSEKDID KFMDKYQKEHATLLSVLTGGVHLHTIRCADEETFQEIKEALRKKSILFEG >gi|237663577|gb|GG668941.1| GENE 99 74264 - 75769 1646 501 aa, chain + ## HITS:1 COG:SA2437_1 KEGG:ns NR:ns ## COG: SA2437_1 COG1705 # Protein_GI_number: 15928230 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Staphylococcus aureus N315 # 51 364 185 475 502 153 34.0 6e-37 MKKQFALFSTLLLLGSSMPVGAFAEGNNLVAENSSVAETTAEATTAEATETTATSETTEA TEESTTETESSTESSESATTESTETSGTETTDSTTDSTSTSTTESTTDSTSTSTTESTTD STSTSTTESSTTPTTTPSSSKEQPKPGTSTSESKQPAKPVTPTAPAEKPVEQPAASTPQP EIVPPVTNETVGLVEDDETFTVSKTKKTEEFIQEIGESARKVAKDKNLYASVMIAQAILE SGSGNSKLSQKPNYNLFGIKGDYKGQSVSFITYEDNGFGNLYTVEAKFRQYPTYKESMED YAKLLKNGLDSNKDFYHGVWKTEAKTYKEATRFLTGKYATDKDYHKKLNALIKTYDLTYY DKEKATVEPMESNFPAYNGKNYDTFNSYAWGNCTQYVYNRITQLGKRVDLTMGNGQDWGE TGRARGYKVSRTPKAGAAVSFPAGVLGADNTYGHVAFVEKVFKDGSILISEMNVKGLNVV STRTISADETHLMNYIVPKDK >gi|237663577|gb|GG668941.1| GENE 100 76046 - 77536 1639 496 aa, chain + ## HITS:1 COG:FN0454 KEGG:ns NR:ns ## COG: FN0454 COG1012 # Protein_GI_number: 19703789 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Fusobacterium nucleatum # 6 496 1 491 491 623 60.0 1e-178 MSKKEINQVVASSYQLYINGEWTTGSGNKMIASYNPSNGEKLAEFVDATNEDVDRAVEAA QEAFQTWKDVDVVTRSNLLLKIADLIEENQEHLAMVETLDNGKPLRETQSIDVPASADHF RYFASVIRAEEGSVKEFDKDTLSIVVKEPIGVVGQIIPWNFPLLMGAWKLAPALAAGNTV VIHPSSSTSLSLLELFKIFDQVLPKGVVNLITGRGSDSGNYMLAHPGFDKLAFTGSTEVG YTVAKAAADRLIPATLELGGKSANIIFEDANWERALEGVQLGILFNQGQVCCAGSRVFVQ SGIYDQFVEALKEKFEQVNVGFPWEKDVEMGAQINEHQLEEILKYVEIGVKEGATLITGG QRLTENGLDKGAFLAPTLLANGTNTMCVAQEEIFGPVATVIKFETEEEVIRLANDSEYGL GGAVFSQDINVALRVARGVRTGRMWVNTYNQLPAGAPFGGYKKSGIGRETHKSMLDAYTQ MKNIYIVTKEEADGLY >gi|237663577|gb|GG668941.1| GENE 101 77770 - 78753 1275 327 aa, chain - ## HITS:1 COG:SPy1151 KEGG:ns NR:ns ## COG: SPy1151 COG0039 # Protein_GI_number: 15675128 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 6 326 3 324 327 473 75.0 1e-133 MTAAAGNKDHQKVILVGDGAVGSSYAFALVTQNIAQEVGIIDINVPKTEGDALDLSHALA FTSPKKIYAATYDDCHDADLVVLTAGAPQKPGETRLDLVHKNLKINKEIVTTIVDSGFNG IFLVAANPVDILTYSTWKFSGFPKERVIGSGTSLDSARFRQAIAELVDVDARNVHAYILG EHGDTEFPVWSHANVAGLQIYEWVKNNPDVDEEAMVNLFFNVRDAAYTIIEKKGATFYGI AVALARITKAILNDENSVLPLSVYLEGEYGQNDIYIGAPAIINRQGVKQVIEIPLTDAEQ EKMEASASALKEVIETAFAKFEAEEAK >gi|237663577|gb|GG668941.1| GENE 102 78971 - 79150 85 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLCFVSLYLLPGFPSPTITFIFHSPWIISLPTQNGWEAYALPSFIHYTIEIKKLAVFED >gi|237663577|gb|GG668941.1| GENE 103 79089 - 79655 604 188 aa, chain + ## HITS:1 COG:SP0005 KEGG:ns NR:ns ## COG: SP0005 COG0193 # Protein_GI_number: 15899954 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Streptococcus pneumoniae TIGR4 # 2 187 3 189 189 223 57.0 1e-58 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK PLTFMNESGRSVGPLLTYFGVDEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIAH LGTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADAALYACEGHTFVE TMNQFNGK >gi|237663577|gb|GG668941.1| GENE 104 79675 - 83214 3640 1179 aa, chain + ## HITS:1 COG:lin0246 KEGG:ns NR:ns ## COG: lin0246 COG1197 # Protein_GI_number: 16799323 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Listeria innocua # 27 1166 28 1168 1179 1182 53.0 0 MNIIERISQTEIAKSWRSQLMTTGTRQLITGLSGSAKTLLMAGALQKTHQKIVIAVPNLY YANQLVDDFLNILPSEQVHLFPVDEVLSAEMAFSSPEARADRVSALNFLMTANAGIVVVP VAGLRKYLPTKETWQNAQLHWEIGTEVEPEILAQRLVLMGYERQSMVGKPGEFSIRGSII DVYPLNAEYPVRVELFDVEIDSIRYFEADTQRSLENLEEVTISPMTDLVFSKSDMNHGMM RLQDALEKRLATAKDQTETDFLEEYFGQLLSSWEQGIPTENAHYYTDFLYQQKTTLLDYL PENSLLFVDDYSRMMETEREIAREEAEWQTLKIEEMRVFSEQTFGVDFHDQLRKTARNTT FFSLFQKGMGNLRFQEVHNFQYRSMQQFFGQMPLLKAEVDRWQKQNQTVVVFVPTKERIQ KVEELFQDFDIPSVVSNWDQLLDGHVQIVQGALQTGFELPKNKLVAITEKEIFHTTTKKR ARRQTISNAERLKSYSDLKTGDYVVHANHGIGKYIGMETLEVDGVHQDYMTILYQNDDKL FIPVTQLNLIQKFVASESKTPKINKLGGSEWTKTKRKVASKIEDIADDLILLYATRESEK GYAFPPDDAYQKEFEEAFPYSETDDQLRSAAEIKHDMEKSRPMDRLLVGDVGFGKTEVAL RAAFKAVSNNKQVAFLVPTTILAQQHYETIQERFEGFPVEIGLLSRFRTKKQQNETIEKI KHGQVDIVIGTHRLLSQDINFSDLGLLIIDEEQRFGVKHKERLKQLRSQVDVLTLTATPI PRTLHMSMLGVRDLSVIETPPENRYPIQTYVMENNPGAIREAIEREMARDGQVFYLYNRV DTIERKVEELQALVPDARIAYAHGQMTEVQLENTLFDFIEGQYDILVTTTIIETGVDIPN ANTLFVENADYMGLSTLYQLRGRVGRSNRVAYAYFMYEQQKILNEVSEKRLEAIKDFTEL GSGFKIAMRDLSIRGAGNLLGAQQHGFIDSVGFDMYSQMLSEAVARKQGKNIQDQKTSVE IDLGIDAYIPGTYITDERQKIEIYKRIRQLENMDMYEELEADLLDRFGEYPDEVAHLLTT GRIKMDGDRALLESIRKRDQKVKFVLSKIGTKTYSVEQLFEALSATSLKADLAVEKEQMT ISLKLPKDCKEAVWIQEIATFTTALRQEKYKHSQETDSL >gi|237663577|gb|GG668941.1| GENE 105 83230 - 84819 1526 529 aa, chain + ## HITS:1 COG:lin0247 KEGG:ns NR:ns ## COG: lin0247 COG2244 # Protein_GI_number: 16799324 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Listeria innocua # 1 527 1 524 529 299 36.0 9e-81 MAQKEMQRMMQGAVVLTIASFIAKVLSAFYRVPFQNFVGDEGFYVYQQVYPIYGIAMTLA LSGLPQFISKIVAEQPDIRSQKQVLRQLYPYVLWLAIACWAFFFFGSQEIAISMGDAALQ PLMEVVSFTFLLVPILSFYRGNFQGHLLMVPSGISQVMEQFVRVGVILVAALSYHYFGGS IYQTGTVAMSGALAGGILAVLVLWYYNRKILSGSTEYLHQWKIMPQTTGLFKRLMIEGGL VSLYSAFLILFQLIDSFKVKNALMLFGLSDLAAKVDKGVYDRGQPLVQLGLVIALALSST FLPGLTKYFMKKDRQQFLQVAKIFLRLTTTLASAASIGLMMLLPYMNFTLFKDYKGNDVL GVYVLSIAFMAIIQAYQSIEQSRNRFKGPLVAAGVGLLVKLLTTGFFTIRWGTLGASWST ILGLLATLFVLVRQSDAAINCFVRERSFLKKLLLSLAIMMLSLLVYQGIISILFQGVHHR SQAFFVTVLGVAVGGTVFISTIIKLELFTIREWLSLPYGAKILRMRQKK >gi|237663577|gb|GG668941.1| GENE 106 84834 - 85097 354 87 aa, chain + ## HITS:1 COG:L1001 KEGG:ns NR:ns ## COG: L1001 COG1188 # Protein_GI_number: 15671997 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Lactococcus lactis # 1 87 17 103 105 97 71.0 7e-21 MRLDKFLKVSRIIKRRTVAKEVADKGRIQINGVLAKSSSTVKIGDLVKIQFGNRILEVEV LQLNDSTKKEDATKMYEIKSETRVSEE >gi|237663577|gb|GG668941.1| GENE 107 85351 - 85830 464 159 aa, chain + ## HITS:1 COG:no KEGG:EF0261 NR:ns ## KEGG: EF0261 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 159 1 159 159 199 100.0 2e-50 MGKNEKNSKKVAALENDYTKEQYVEFQKQQKQLIFRRRRLAAIFLVAFIIFAFSGIQLMK DYHRLGAFKQERADAIAESVAVDKKVKDLKKDVALLKDDDYVAKLARSRFLLSKEGEQIY PTPEQMKKTQTSGAEESKSSSEKNSQSQSSTETTKSSAE >gi|237663577|gb|GG668941.1| GENE 108 85875 - 86354 358 159 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|218290661|ref|ZP_03494752.1| RNA binding S1 domain protein [Alicyclobacillus acidocaldarius LAA1] # 1 159 1 134 134 142 49 6e-33 MSIEVGAKLPGKVSGITNFGAFIDLGEGKTGLVHISEVSNGFVKDIHDVLTVGDQVTVKV TSVGDDGKIGLSIRKAQEPAEGQQPKREFQRRENNYENRDRNPRAGGKKPFNKPQANNNN NKQDFDSLMSSFLKDSDDRLSSLKRNTEGKRGGRGGRRG >gi|237663577|gb|GG668941.1| GENE 109 86440 - 87828 1303 462 aa, chain + ## HITS:1 COG:SPy0013 KEGG:ns NR:ns ## COG: SPy0013 COG0037 # Protein_GI_number: 15674260 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Streptococcus pyogenes M1 GAS # 2 443 4 407 428 200 32.0 4e-51 MFWQFYKRGKEQGFWQPHQTIVVAVSGGVDSMALLTLMEQVAEKEQLQLVVAHVNHQLRE ASAQEAQYLATYCQQRELTYYETRWEDPEKQRNLEAKARTFRYEFFKEVMEIEGAAVLMT AHHLDDQAETILMKLIRGTNFSHSAGIKERRPFATGELIRPLLIYPKEELYQFAQRQAFV YFEDETNQTNEYLRNRLRNQVLPLLKQENPQFLDQIASFSNEQRFAQEFIQEQIEPQLSE AVEPTKQGWRIPLKRLLKETPAYQHFFLTAFFQKTLVPLGVSLNQRQMTQILKVLNDERQ PQGSVMLEQQWQLAKSYDWLCLEQKQAALREEVTHLLVPGAGIYLSETEWLGLIATDKPF PLPEEINQWTGQLLAIPLTTATPLTVRHRQSGDRITLKPGFTKKLSRVFIDQKVPNEARE SAWVITDEQEEIIWVPKFANSYLSIPLETDKIHYRLLFKTKE >gi|237663577|gb|GG668941.1| GENE 110 87847 - 88392 747 181 aa, chain + ## HITS:1 COG:lin0251_2 KEGG:ns NR:ns ## COG: lin0251_2 COG0634 # Protein_GI_number: 16799328 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Listeria innocua # 2 178 1 177 179 256 74.0 1e-68 MIEKDIEKVLISKEEILAKSAELGKQLTEEYQGKNPLVVGILKGAVPFMADLTREINTYL ELDFMDVSSYGNATVSSGEVKIVKDLDTNVEGRHILIVEDIIDSGRTLAYLVDLFRYRKA ASVKIVTLLDKPEGRVVDIKADYVGFDVPNEFVVGYGLDYAETYRNLPYIGVLKPEVYES N >gi|237663577|gb|GG668941.1| GENE 111 88486 - 90642 1338 718 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 122 659 94 635 636 520 50 1e-146 MNKKNNGMKNGLYYVLVVLAMVMVVYFIFGNNNQQSPDIDYSTFQQQLEDGKVKDMTIQP TNGVYRIEGQYKEKQEVKDTGGLSLWGSTQASSKGFTTTVLPSDTTLAGIQDAAQNNKVK LVVKEQSTSGAWLSLLFSFLPLVIIFFFFYMMMSQQGGGGGGGGRVMNFGKSKAKEADKK ANRVRFSDVAGAEEEKQELVEVVEFLKDPRRFAELGARIPAGVLLEGPPGTGKTLLAKAV AGEAGVPFYSISGSDFVEMFVGVGASRVRDLFETAKKNAPAIIFIDEIDAVGRQRGAGMG GGHDEREQTLNQLLVEMDGFDGNEGVIVIAATNRSDVLDPALLRPGRFDRQILVGRPDVK GREAILRVHAKNKPLADDVDLKVVAQQTPGFAGADLENVLNEAALVAARRNKKKIDASDV DEAEDRVIAGPAKKDRVINKKEREMVAYHEAGHTIVGLVLSRARVVHKVTIIPRGRAGGY MIALPKEDQFLMTKEDMFEQIVGLLGGRTAEEIIFGVQSTGASNDFEQATGIARSMVTEY GMSDKLGPVQYEGNHQVFVGRDYGQTKAYSEQVAFEIDQEVRRILMDAHTKAHEIIEAHR EQHKLIAEKLLEYETLDAKAIKSLFETGKMPEGADSDYPSEKEAQTFEEAKRALEEKEAQ KQVEEKQDFEEAKKELHDEAEEVKVESEQTEKEVQSEEKKDSDSNSEYDRNNYEDRYK >gi|237663577|gb|GG668941.1| GENE 112 90804 - 91700 1098 298 aa, chain + ## HITS:1 COG:BS_yacC KEGG:ns NR:ns ## COG: BS_yacC COG1281 # Protein_GI_number: 16077139 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Bacillus subtilis # 3 293 2 291 291 349 57.0 5e-96 MEDYLVKALCYKGSIRAYAISATETVSEAQRRHDTWSSSTAALGRTLIGALLLGATLKGD DKLTVKVQGNGPAGAIIVDSNGRGETKGYIKNPHVSLKLNATGKIDVRGAVGNEGIFTVI KDLGLKETFSGQTPIVSGEIGEDFTYFMAVSEQVPSAIGLGVLVDTDESVKAAGGFMIQV MPGADESIIDFIEQRLAEVPPISQLLENGETPEQVLYRLLGEDEVEILEKMPVQFKCDCS KEKFATALIAVGIDELNAMIDEDHGAEAVCQFCNNKYHYSEEELIELRDEAIRNTKQK >gi|237663577|gb|GG668941.1| GENE 113 91697 - 92710 554 337 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase [Haemophilus influenzae R2866] # 1 327 22 347 353 218 37 1e-55 VGGKTMWKIGDVEIPNRVVVAPMAGISNAAFRVTVKEFGAGLVVCEMISDKGIKLRNKKT LEMLYIDEREYPLSVQIFGGDKETLVEAAKFVEENTQAAIIDINMGCPVNKIIKAEAGAK WLLDPNKVHEMVHAVSSAVSLPVTVKMRTGWDEDHLYAVDNALAAEQAGASAIAMHGRTR VQMYEGTANWDVLKEVKKHLTIPFMGNGDVKTPEDAKRMLEYVGADGVMIGRAALGNPWM IQRTKEYLETGELMPEPSPAEKINIAKVHLQRLVDLKGEKIAVREFRQHASYYLKGISRA AKVKVAINQVETQQAVVDLLDAFVEKISKVAVTTIEE >gi|237663577|gb|GG668941.1| GENE 114 92804 - 94300 2053 498 aa, chain + ## HITS:1 COG:BS_lysS KEGG:ns NR:ns ## COG: BS_lysS COG1190 # Protein_GI_number: 16077150 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Bacillus subtilis # 1 498 1 497 499 710 72.0 0 MAEEQQAHLEDLNDQMLVRREKMEALREEGIDPFGKRFDRTHNSAELHEQYDNHTKEELS EMNTEVSVAGRMMTKRGKGKAGFAHLQDREGQIQIYVRKDQVGDEAYELFKHADLGDFFG VTGQVMKTNTGEVTVKAQTITLLTKALRPLPDKYHGLTNVEQRYRQRYLDLISNKESFDR FMKRSQIISEIRRYLDGNGYVEVETPVLHNEAGGAAARPFITHHNALDMDLYLRIALELH LKRLIVGGMEKVYEIGRVFRNEGIDTTHNPEFTMLEAYTAYTDYQDVMDLTEGIIRNAAE KVLGTTDITYDGQAVDLGSPFKRLHMVDAVKEQTGVDFWQEMTIEEARALAKEHNVEITD AMTVGHIINEFFETFVEDTLQQPTFIYGHPVAVSPLAKKNPEDGRFTDRFELFIIGKEFA NAFTELNDPIDQRERFEEQEKEREQGNDEAHGVDEDFIEALEYGLPPTGGLGIGIDRLVM LLTDAQSIRDVLLFPTMR Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:35:46 2011 Seq name: gi|237663576|gb|GG668942.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD21, whole genome shotgun sequence Length of sequence - 3812 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 3, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 - CDS 51 - 473 478 ## COG1307 Uncharacterized protein conserved in bacteria 2 1 Op 2 16/0.000 - CDS 483 - 968 409 ## COG0262 Dihydrofolate reductase 3 1 Op 3 . - CDS 1010 - 1966 711 ## COG0207 Thymidylate synthase - Prom 2045 - 2104 80.3 + Prom 2026 - 2085 80.4 4 2 Tu 1 . + CDS 2146 - 3069 664 ## COG5655 Plasmid rolling circle replication initiator protein and truncated derivatives + Term 3101 - 3141 0.1 5 3 Tu 1 . - CDS 3602 - 3811 249 ## gi|33416258|ref|NP_878004.1| hypothetical protein VRA0025 Predicted protein(s) >gi|237663576|gb|GG668942.1| GENE 1 51 - 473 478 140 aa, chain - ## HITS:1 COG:SA1258 KEGG:ns NR:ns ## COG: SA1258 COG1307 # Protein_GI_number: 15927006 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 1 133 1 133 279 185 77.0 3e-47 MAKQIIVTDSTSDLSHEYLKQHNIHVIPLSLTIDGKSYTDQVDISSSEYIDHIENDADVK TSQPPIGRFIETYEQLAQDDVEIISIHLSSGLSGTYNTAVQASHMVDGNITVIDSKSISF GLGYQIKQIVELVLLQSKKI >gi|237663576|gb|GG668942.1| GENE 2 483 - 968 409 161 aa, chain - ## HITS:1 COG:SA1259 KEGG:ns NR:ns ## COG: SA1259 COG0262 # Protein_GI_number: 15927007 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Staphylococcus aureus N315 # 1 159 1 159 159 269 79.0 1e-72 MTLSIIVAHDKQRVIGYQNQLPWHLPNDLKHIKQLTTGNTLVMARKTFNSIGKPLPNRRN VVLTNQASFHHEGVDVINSLDEIKELSGHVFIFGGQTLYEAMIDQVDDMYITVIDGKFQG DTFFPPYTFENWEVESSVEGQLDEKNTIPHTFLHLVRRKGK >gi|237663576|gb|GG668942.1| GENE 3 1010 - 1966 711 318 aa, chain - ## HITS:1 COG:SA1260 KEGG:ns NR:ns ## COG: SA1260 COG0207 # Protein_GI_number: 15927008 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Staphylococcus aureus N315 # 1 318 1 318 318 582 85.0 1e-166 MYNPFDEAYHGLCEEILEIGNRRDDRTHTGTISKFGHQLRFDLTKGFPLLTTKKVSFKLV ATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYVQSDDYHGPDMTDFGHRSQQDPEFNEQ YKEEMKKFKERILNDDAFAKKYGNLGNVYGKQWRDWEDKNGNHYDQLKSVIQQIKTNPNS RRHIVSAWNPTEIDSMALPPCHTMFQFYVQEGKLNCQLYQRSADIFLGVPFNIASYALLT HLVAKECGLEVGEFIHTFGDAHIYSNHMDAIHTQLSRDSYLPPQLKINTDKSIFDINYED LELINYESHPAIKAPIAV >gi|237663576|gb|GG668942.1| GENE 4 2146 - 3069 664 307 aa, chain + ## HITS:1 COG:pli0015 KEGG:ns NR:ns ## COG: pli0015 COG5655 # Protein_GI_number: 18450301 # Func_class: L Replication, recombination and repair # Function: Plasmid rolling circle replication initiator protein and truncated derivatives # Organism: Listeria innocua # 1 275 24 319 327 125 33.0 1e-28 MEKYTEKKRRNQVFQKFIERHVKEGQMDLIRECNTFLSFVADKTLEKQKLHKSNLCKNRF CPVCAWRKARKDALGLSLMMQYIKQKEDKQFIFLTLTTPNVTVEHLESEIKAYNHSFQKM FKRKKVISATKGYVRKLEITYNKERDDYNPHFHVLIAVNKSYFTDKRYYISQKEWLNLWR DVTGIDEITQVHAQKIKQNNNKELYEMAKYSGKDSDYLINQKVFDTFYKSLKGKQILVYS GLFKEARKKLKNGDLDYLKEVDPTEYIYQIFYHWNQKEYLASEIFDLTEEEKSKINHQMI DEIDEEK >gi|237663576|gb|GG668942.1| GENE 5 3602 - 3811 249 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|33416258|ref|NP_878004.1| ## NR: gi|33416258|ref|NP_878004.1| hypothetical protein VRA0025 [Staphylococcus aureus] hypothetical protein PGO1_p40 [Staphylococcus aureus] conserved hypothetical protein [Staphylococcus epidermidis BCM-HMP0060] hypothetical protein VRA0025 [Staphylococcus aureus] hypothetical protein PGO1_p40 [Staphylococcus aureus] conserved hypothetical protein [Staphylococcus epidermidis BCM-HMP0060] hypothetical protein SAP016A_053 [Staphylococcus epidermidis] hypothetical protein SAP079A_048 [Staphylococcus aureus] hypothetical protein SAP082A_047 [Staphylococcus aureus] # 1 69 5 73 73 110 100.0 4e-23 YIKTLETLKGKCNLVTNSESLSDLKDSDIFWTDAMLSMLENMKKEQVTVEEGIAYLENII QKSGSNYKN Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:35:56 2011 Seq name: gi|237663575|gb|GG668943.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD22, whole genome shotgun sequence Length of sequence - 5346 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 281 - 1838 100.0 # AY692453 [D:1..1570] # 16S ribosomal RNA # Enterococcus faecalis # Bacteria; Firmicutes; Lactobacillales; Enterococcaceae; Enterococcus. + LSU_RRNA 2220 - 5128 99.0 # AE016830 [D:250246..253154] # 23S ribosomal RNA # Enterococcus faecalis V583 # Bacteria; Firmicutes; Lactobacillales; Enterococcaceae; Enterococcus. + 5S_RRNA 5229 - 5344 100.0 # AE016830 [D:253255..253370] # 5S ribosomal RNA # Enterococcus faecalis V583 # Bacteria; Firmicutes; Lactobacillales; Enterococcaceae; Enterococcus. Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:35:57 2011 Seq name: gi|237663574|gb|GG668944.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD23, whole genome shotgun sequence Length of sequence - 4432 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 4, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 134 - 191 8.0 1 1 Op 1 . - CDS 211 - 582 353 ## EFA0082 replication-associated protein RepC 2 1 Op 2 . - CDS 575 - 1420 723 ## COG1192 ATPases involved in chromosome partitioning - Prom 1455 - 1514 6.5 3 2 Tu 1 . + CDS 1424 - 1651 59 ## gi|255973298|ref|ZP_05423884.1| predicted protein + Prom 1774 - 1833 9.9 4 3 Tu 1 . + CDS 1892 - 2473 446 ## EFA0001 replication-associated protein RepA + Prom 2561 - 2620 80.4 5 4 Op 1 . + CDS 2697 - 2975 123 ## EFA0001 replication-associated protein RepA 6 4 Op 2 . + CDS 3019 - 4002 447 ## COG0682 Prolipoprotein diacylglyceryltransferase 7 4 Op 3 . + CDS 3924 - 4115 165 ## EF0501 putative lipoprotein 8 4 Op 4 . + CDS 4133 - 4430 238 ## EF0502 hypothetical protein Predicted protein(s) >gi|237663574|gb|GG668944.1| GENE 1 211 - 582 353 123 aa, chain - ## HITS:1 COG:no KEGG:EFA0082 NR:ns ## KEGG: EFA0082 # Name: repC # Def: replication-associated protein RepC # Organism: E.faecalis # Pathway: not_defined # 1 123 1 123 123 175 100.0 6e-43 MSKYTFHKDPERKQSKEIKATEISEPETTFDLSSFSKEESSASDSGSKRIGRPAKNKVYS TIRIQKSNINRINAFQNTLDFETQDDIVSFMLDRLDNTLEPEQRTMFEMYMKAYESRDKK KQK >gi|237663574|gb|GG668944.1| GENE 2 575 - 1420 723 281 aa, chain - ## HITS:1 COG:pli0069 KEGG:ns NR:ns ## COG: pli0069 COG1192 # Protein_GI_number: 18450351 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Listeria innocua # 5 273 22 279 293 206 42.0 3e-53 MVKKIVFGNFKGGVGKTTNSVMVAYELAKKGFRVLVCDLDPQANSTQLLRRTYGLQNNKE LPIKETMMVAIQEGNLGKAVVNVMPNLYLLPSHKDFVNYPDFLELTIMPTEKNYKERRIA FFSELLKPIENDYDYIIFDVPPTLSVFTDTALYSSNYIVIVLQTQQRSLDGAEAFWEYLQ TLYDTYKNIDFDIAGVLPVLLKNDSGIDNQIIKDAKDAFGDETLFNTIVRHMERLKRYDR KGISEEGYTELYDFHDRKVHELYNKLSDEIIERTEGTTANE >gi|237663574|gb|GG668944.1| GENE 3 1424 - 1651 59 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|255973298|ref|ZP_05423884.1| ## NR: gi|255973298|ref|ZP_05423884.1| predicted protein [Enterococcus faecalis T1] predicted protein [Enterococcus faecalis JH1] predicted protein [Enterococcus faecalis T1] predicted protein [Enterococcus faecalis JH1] # 1 75 1 75 75 73 100.0 6e-12 MTPHFINIFLLQIVYHKYFLTTNNIYKIYYFTILLSYYFTILLLYYFTILLLYYLTILLS YCFKRMILTFLQKDF >gi|237663574|gb|GG668944.1| GENE 4 1892 - 2473 446 193 aa, chain + ## HITS:1 COG:no KEGG:EFA0001 NR:ns ## KEGG: EFA0001 # Name: repA-1 # Def: replication-associated protein RepA # Organism: E.faecalis # Pathway: not_defined # 1 193 1 193 336 347 98.0 2e-94 MNNFKFFNVNRIYNELFYQFPKVLIASDKYKKMSDSTKIAYMLLKARLEFAVQRNQVDEN GNVYFTFTISELGEVLDCGKQKVLAIKSQLEEYGLLYQKQMGFNKTLGKNNPNRLYLAEL EVTENDIYQLQTFDDTMQENVDKSEGMKIIPTPQRKTNAESLGNQEGMKIIPCQNIDKSE GMKISTVFNNLNT >gi|237663574|gb|GG668944.1| GENE 5 2697 - 2975 123 92 aa, chain + ## HITS:1 COG:no KEGG:EFA0001 NR:ns ## KEGG: EFA0001 # Name: repA-1 # Def: replication-associated protein RepA # Organism: E.faecalis # Pathway: not_defined # 2 92 246 336 336 169 97.0 3e-41 MVGSIIRAKTKVEKEYNVVLIGEDYQEEIDKCLRRVMHKIKTDSTVKSPKGLFYKSFYNL FVECALEKKSQLNKKSNSNTPGVITHNWVENQ >gi|237663574|gb|GG668944.1| GENE 6 3019 - 4002 447 327 aa, chain + ## HITS:1 COG:BH3589 KEGG:ns NR:ns ## COG: BH3589 COG0682 # Protein_GI_number: 15616151 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Bacillus halodurans # 164 307 1 142 289 181 58.0 1e-45 MSFESENKNVEKIVVSNKTYYLVGTSHISENSVKLVKEVIERVQPDTVSIELDKKRYEKY TNSNQWGNTDIIKIIKEKKLVVLISNIVYSAYQKKLANTKGTTQAGELIQAVKSAKEIGA NIQLIDRDIQVTFKRMWRHLSFLEKPKLFMTFFTEFDDIEQDKLEEYLESDSFDKVFISF GPFTIYWYAVFIVFGIIIGYFVANRRAKRAALPEDTIVDLLLYGLPVSIISARLYYVLFE LPLYIDDPLSIFKIWEGGLAIHGGLIGAVLTGVIYCKKKHLSFWNVADVVAPSIVIGQII GRWGNFLFMTQKIMQLVNIPMTKKTKK >gi|237663574|gb|GG668944.1| GENE 7 3924 - 4115 165 63 aa, chain + ## HITS:1 COG:no KEGG:EF0501 NR:ns ## KEGG: EF0501 # Name: not_defined # Def: putative lipoprotein # Organism: E.faecalis # Pathway: not_defined # 2 63 51 112 114 73 61.0 3e-12 MGKFSVYDSKDNAAGKYSYDEKNKKITFDVSGRGTFIMEKVEYKDGKINGEINDRETVFV KEK >gi|237663574|gb|GG668944.1| GENE 8 4133 - 4430 238 99 aa, chain + ## HITS:1 COG:no KEGG:EF0502 NR:ns ## KEGG: EF0502 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 99 1 97 781 168 85.0 7e-41 MNKKSLVKAVLLFLVGCFFVFTQTTAVNAAPKPDENKVIVTEPTTNVDTIYDTYKDNAFE LMTKEKEKDKPWSTGISEAVVNASAAVKTFVWAGVKGLG Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:36:27 2011 Seq name: gi|237663573|gb|GG668945.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD24, whole genome shotgun sequence Length of sequence - 39243 bp Number of predicted genes - 42, with homology - 41 Number of transcription units - 24, operones - 14 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 109 - 843 904 ## COG3884 Acyl-ACP thioesterase 2 1 Op 2 . - CDS 879 - 986 68 ## - Prom 1016 - 1075 7.2 + Prom 968 - 1027 7.8 3 2 Op 1 1/0.111 + CDS 1118 - 1702 791 ## COG3397 Uncharacterized protein conserved in bacteria 4 2 Op 2 . + CDS 1745 - 2791 1088 ## COG3469 Chitinase + Term 2802 - 2844 5.0 5 3 Op 1 12/0.000 - CDS 2887 - 3198 581 ## COG2076 Membrane transporters of cations and cationic drugs 6 3 Op 2 . - CDS 3195 - 3530 414 ## COG2076 Membrane transporters of cations and cationic drugs - Prom 3660 - 3719 11.4 + Prom 3708 - 3767 8.0 7 4 Op 1 4/0.000 + CDS 3817 - 4791 1092 ## COG0346 Lactoylglutathione lyase and related lyases 8 4 Op 2 . + CDS 4813 - 5433 689 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family + Term 5437 - 5480 14.1 - Term 5423 - 5467 15.1 9 5 Tu 1 . - CDS 5478 - 6806 1356 ## COG3579 Aminopeptidase C - Prom 6905 - 6964 6.5 + Prom 6871 - 6930 5.6 10 6 Op 1 . + CDS 6956 - 7345 433 ## COG1725 Predicted transcriptional regulators 11 6 Op 2 . + CDS 7345 - 7578 238 ## EF0300 hypothetical protein + Prom 7583 - 7642 3.0 12 6 Op 3 . + CDS 7675 - 8715 767 ## EF0300 hypothetical protein + Term 8716 - 8770 14.4 - Term 8712 - 8751 9.4 13 7 Op 1 . - CDS 8759 - 8965 281 ## EF0299 copper transport protein CopZ 14 7 Op 2 1/0.111 - CDS 8987 - 11473 3123 ## COG2217 Cation transport ATPase 15 7 Op 3 . - CDS 11489 - 11929 398 ## COG3682 Predicted transcriptional regulator - Prom 11997 - 12056 5.5 - Term 11950 - 12008 3.1 16 8 Op 1 . - CDS 12058 - 13221 1335 ## COG0475 Kef-type K+ transport systems, membrane components 17 8 Op 2 . - CDS 13242 - 14609 1031 ## COG0168 Trk-type K+ transport systems, membrane components - Prom 14679 - 14738 2.1 18 9 Tu 1 . - CDS 14741 - 15283 580 ## COG0262 Dihydrofolate reductase - Prom 15431 - 15490 10.5 + Prom 15425 - 15484 8.7 19 10 Tu 1 . + CDS 15530 - 16291 650 ## COG1737 Transcriptional regulators + Term 16300 - 16352 18.3 + Prom 16378 - 16437 4.0 20 11 Op 1 8/0.000 + CDS 16465 - 17799 1159 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 21 11 Op 2 . + CDS 17826 - 19256 1368 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 19258 - 19303 13.7 - Term 19245 - 19291 10.1 22 12 Op 1 8/0.000 - CDS 19293 - 20429 1461 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 23 12 Op 2 . - CDS 20443 - 21360 1053 ## COG0031 Cysteine synthase - Prom 21382 - 21441 3.5 - Term 21383 - 21428 10.6 24 13 Tu 1 . - CDS 21450 - 21587 199 ## EF0288 hypothetical protein - Prom 21668 - 21727 4.6 - Term 21704 - 21751 12.5 25 14 Tu 1 . - CDS 21756 - 22316 853 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 22345 - 22404 5.0 + Prom 22428 - 22487 6.3 26 15 Tu 1 . + CDS 22671 - 23318 657 ## EF0286 fibronectin-binding protein, putative + Term 23327 - 23361 6.2 - Term 23307 - 23356 14.5 27 16 Tu 1 . - CDS 23357 - 24292 1145 ## COG0167 Dihydroorotate dehydrogenase - Prom 24350 - 24409 12.9 - Term 24387 - 24437 7.2 28 17 Op 1 8/0.000 - CDS 24470 - 24904 639 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 29 17 Op 2 . - CDS 24906 - 26144 1445 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase + Prom 26355 - 26414 7.8 30 18 Tu 1 . + CDS 26442 - 27194 1027 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) + Term 27234 - 27290 8.3 - Term 27220 - 27278 4.1 31 19 Op 1 . - CDS 27293 - 27691 407 ## EF0281 hypothetical protein 32 19 Op 2 . - CDS 27736 - 28671 1178 ## COG0053 Predicted Co/Zn/Cd cation transporters - Prom 28722 - 28781 5.1 33 20 Op 1 . - CDS 28814 - 29488 715 ## COG1418 Predicted HD superfamily hydrolase 34 20 Op 2 . - CDS 29501 - 30013 255 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) 35 20 Op 3 . - CDS 30026 - 30517 599 ## COG0350 Methylated DNA-protein cysteine methyltransferase - Prom 30542 - 30601 2.6 + Prom 30526 - 30585 6.2 36 21 Tu 1 . + CDS 30655 - 31221 361 ## COG2169 Adenosine deaminase + Term 31251 - 31295 1.7 - Term 31192 - 31235 6.9 37 22 Tu 1 . - CDS 31239 - 31982 566 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 32011 - 32070 9.5 - Term 32038 - 32093 18.4 38 23 Op 1 . - CDS 32120 - 32938 977 ## COG0406 Fructose-2,6-bisphosphatase 39 23 Op 2 . - CDS 32959 - 34425 1447 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Term 34462 - 34525 4.1 40 24 Op 1 8/0.000 - CDS 34548 - 35978 1688 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 41 24 Op 2 7/0.000 - CDS 36002 - 37900 2363 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 42 24 Op 3 . - CDS 37974 - 38816 777 ## COG3711 Transcriptional antiterminator - Prom 39021 - 39080 9.6 - TRNA 39059 - 39130 70.2 # Glu TTC 0 0 - TRNA 39146 - 39233 62.7 # Ser GCT 0 0 Predicted protein(s) >gi|237663573|gb|GG668945.1| GENE 1 109 - 843 904 244 aa, chain - ## HITS:1 COG:SP1408 KEGG:ns NR:ns ## COG: SP1408 COG3884 # Protein_GI_number: 15901262 # Func_class: I Lipid transport and metabolism # Function: Acyl-ACP thioesterase # Organism: Streptococcus pneumoniae TIGR4 # 1 242 1 239 245 175 38.0 6e-44 MGKKHTSSYEVAYYDGDFTGAMKIPALLAVVIKVSEEQTELLGRNAAYVAQFGLGWVITN YEIEIHRLPKVGEKVAITTQAMSYNKYFCYRNFWVHDEEGNECVFVKSTFVLMDQKNRKI SSVLPEIIAPFDSEKITKIYRHEKIEKVTEGNFLPYRVRFFDIDGNQHVNNAIYFNWLLD VLGYDFLTTHQPKKILVKFDKEVEYGQEVESHYEIVEQENHLKTRHEIRIDGQTYCEANI DWTN >gi|237663573|gb|GG668945.1| GENE 2 879 - 986 68 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFLNNINNSVFQSFVNFSFGIAIEEITWYTFKKKQ >gi|237663573|gb|GG668945.1| GENE 3 1118 - 1702 791 194 aa, chain + ## HITS:1 COG:lin2611_1 KEGG:ns NR:ns ## COG: lin2611_1 COG3397 # Protein_GI_number: 16801673 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 8 193 7 191 294 170 47.0 2e-42 MKKSLLTIVLAFSFVLGGAALAPTVSEAHGYVASPGSRAFFGSSAGGNLNTNVGRAQWEP QSIEAPKNTFITGKLASAGVSGFEPLDEQTATRWHKTNITTGPLDITWNLTAQHRTASWD YYITKNGWNPNQPLDIKNFDKIASIDGKQEVPNKVVKQTINIPTDRKGYHVIYAVWGIGD TVNAFYQAIDVNIQ >gi|237663573|gb|GG668945.1| GENE 4 1745 - 2791 1088 348 aa, chain + ## HITS:1 COG:lin1996 KEGG:ns NR:ns ## COG: lin1996 COG3469 # Protein_GI_number: 16801062 # Func_class: G Carbohydrate transport and metabolism # Function: Chitinase # Organism: Listeria innocua # 11 347 13 349 352 455 66.0 1e-128 MKLKKIIPAFLLLSTVAVGLWLTPTQASADAADTMVDISGKKVLVGYWHNWASKGRDGYK QGTSASLNLSEVNQAYNVVPVSFMKSDGLTRIPTFKPYNQTDTAFRQEVAQLNSQGRAVL LALGGADAHIQLVKGDEQAFANEIIRQVETYGFDGLDIDLEQLAITAGDNQTVIPAALKI VKDHYRAQGKNFIITMAPEFPYLKPGAAYETYITSLNGYYDYIAPQLYNQGGDGVWVDEI MTWVAQSNDALKYEFLYYMSDSLIHGTRGYLQIPNDKLVLGLPANRDAAGSGYVVEATPV AKTFDQLAKDGNPIRGLMTWSANWDVGQDVNGKSYNNEFATRYSNLVK >gi|237663573|gb|GG668945.1| GENE 5 2887 - 3198 581 103 aa, chain - ## HITS:1 COG:BS_ykkD KEGG:ns NR:ns ## COG: BS_ykkD COG2076 # Protein_GI_number: 16078375 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Bacillus subtilis # 1 102 2 104 105 86 46.0 1e-17 MSWLYLVIAGCFEIFGVGSIKLFTTKKDLRSLLILILAFSGSFLFLYLGMRQLPMGVSYA VWTGIGTAGGAILGMLLGESKDPRRIFFIFLIIVSVIGLKLIG >gi|237663573|gb|GG668945.1| GENE 6 3195 - 3530 414 111 aa, chain - ## HITS:1 COG:BH0686 KEGG:ns NR:ns ## COG: BH0686 COG2076 # Protein_GI_number: 15613249 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Bacillus halodurans # 1 111 1 111 114 84 49.0 3e-17 MSKAWLKVIFGAFCEVIWVIGMKHSTTWWEILGTVIAIFISFYALIKAGEKLPVGTAYAV FVGLGSAGTIVTDHFLFHTPLGIGKVLFLLLLLIGVIGLKMVTGNKEEETR >gi|237663573|gb|GG668945.1| GENE 7 3817 - 4791 1092 324 aa, chain + ## HITS:1 COG:lin0753 KEGG:ns NR:ns ## COG: lin0753 COG0346 # Protein_GI_number: 16799827 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Listeria innocua # 7 316 7 316 319 415 63.0 1e-116 MNTQILGLHHVTAMTSSAEKIYHFFTDILGLRLIKKTVNQDDIETYHLFFADDAGSPGTD MTFFDFPGLPKGTKGTNTISRTSFRVKDDAALDYWVSRFNEYAIDHGEIQERFGKKYLEF EDFDNQRYQLISDEKNQGVAAGTPWKKSNVPSEHALIGLGPAFVTVENYEHLQLVLTEVL GFKLIDAEGSFHLFEVGEGGNGASIIVEHREDLPAAQEGYGNVHHLALRVADEEALRFWI EKINRLEFPNSGFVERFYFKSEYFLAATHVLFELATDGPGFLEDETYEHAGEKLSLPPFL EPKRAGIEEFVRPFDTSDANVQRN >gi|237663573|gb|GG668945.1| GENE 8 4813 - 5433 689 206 aa, chain + ## HITS:1 COG:lin0755 KEGG:ns NR:ns ## COG: lin0755 COG1853 # Protein_GI_number: 16799829 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Listeria innocua # 1 205 1 205 206 181 47.0 1e-45 MIHYNSNELSAKTAYKFLSGSIIPRPIAWVTTQDTATGVVNAAPFSFFNAAAAEIPLATL SILRPDKEPKDTARNILATKELVIHFVNEDVLTQMNQTSASLAAEISEIDTFGIETIASQ TVTVPAIKAAPIRMEARLHQYVPIANHEGQIITDLFIVEITDFYFDSAVFDEEHQYILPE KLQPIARLAGNDYTTLGEIREVRRPT >gi|237663573|gb|GG668945.1| GENE 9 5478 - 6806 1356 442 aa, chain - ## HITS:1 COG:SPy1651 KEGG:ns NR:ns ## COG: SPy1651 COG3579 # Protein_GI_number: 15675522 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase C # Organism: Streptococcus pyogenes M1 GAS # 1 442 1 443 445 559 61.0 1e-159 MTAIEPKLTEKFHQDFLNNNKQNALQRSVVKNGISASGESVQGAVNNVPVFSVDLATGKV ANQKQSGRCWMFAALNTFRHRMLNAFQLKDFELSQNYTFFWDKYEKSNYFYENIIATADQ PLTSRKVAFLLATPQQDGGQWDMIVSIFDKYGVVPKTAMPESSNSSSSRDLNNYLNKKLR KDATILRSLIEKGASAEEVQKNKEAMLQEIYNFLAISLGTPPETFDFEYRDEEKNYHLDQ NLTPQTFFEKYVGVNLHDYVSIINAPTEDKPFNKTYTVEMLGNVVGGKEVKYLNVEMAAF KKLAAAQLEQGESVWFGCDVGQSSTRDTGIMALDVYDMNDLFDIDFTMTKAERLDFGESL MTHAMVLTGVDIVDGQTTKWKVENSWGEKVGENGFFVMSDAWMDEYTYQIVVHKDLLTDE QKKAWEQAPTVLAPWDPMGALA >gi|237663573|gb|GG668945.1| GENE 10 6956 - 7345 433 129 aa, chain + ## HITS:1 COG:CAC0599 KEGG:ns NR:ns ## COG: CAC0599 COG1725 # Protein_GI_number: 15893888 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 124 1 125 125 104 44.0 4e-23 MLLEIDEQSEQPIYQQLIDQIIVGIAKGELVPNESLPSIRQLADEIGVNMMTVSKAYNKL KQSGYIVTDRRNGTKIAAKLPATAVWQQQLHERLELLLAESFLHQQSEAEIQALIQKIYQ NFDSKGRAL >gi|237663573|gb|GG668945.1| GENE 11 7345 - 7578 238 77 aa, chain + ## HITS:1 COG:no KEGG:EF0300 NR:ns ## KEGG: EF0300 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 77 1 77 456 140 98.0 2e-32 MAVFFYFILVSVAFFMAFTMGIYANPHKNIILENTLPEDKLQDPSVQAIRKRYKKRLVQL AAVFSVLSLPLLFIPYD >gi|237663573|gb|GG668945.1| GENE 12 7675 - 8715 767 346 aa, chain + ## HITS:1 COG:no KEGG:EF0300 NR:ns ## KEGG: EF0300 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 346 111 456 456 656 99.0 0 MQNGWLLPKRPLLIDTQLVLNKNQKLISFWWFLPAIILTFAGGFYSLQTAIGSWILFLIT VLMLSLFIGGYYFIARLPVKPLTSDSKINQQINDLFRHHWSVLMVLSALVFAPLTILPTF TIVIDYTVAMALSFCYFILLFVYVGFLFYYLFSMRKKQDQFVLQAGDYRYGDDDQYWRYG IYINPKDPKIMVPDRIGMNLSINLGRPAGKIILAATGILTIAVLFFATVPMFINDFSSHA FQATIEKKQIELSAPLAKTRSIPFNQITAVSLIDDLPQERIRTMGAATDSYLTGEFKVAG KPAYLLIYTKSHPILKIETREKVYYYTARDGQETTKIYQEIKAKLP >gi|237663573|gb|GG668945.1| GENE 13 8759 - 8965 281 68 aa, chain - ## HITS:1 COG:no KEGG:EF0299 NR:ns ## KEGG: EF0299 # Name: copZ # Def: copper transport protein CopZ # Organism: E.faecalis # Pathway: not_defined # 1 68 1 68 68 102 100.0 3e-21 MEKTVKIDGMKCDGCVQAVTEKFSGIDGVTNVAVHLADQTAVVTADREVSQDELNTTLAD TKFKVVSE >gi|237663573|gb|GG668945.1| GENE 14 8987 - 11473 3123 828 aa, chain - ## HITS:1 COG:CAC3655 KEGG:ns NR:ns ## COG: CAC3655 COG2217 # Protein_GI_number: 15896888 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Clostridium acetobutylicum # 1 817 1 814 818 942 63.0 0 MESKTFDIEGMSCASCAQTIEKATAKLPGMAKASVNLATEKLSVTYDQTEVTEEEIKEAV SDAGYKAISPAQQRTFAIEGMSCASCAQTIEKAVNQLSGVQQAIVNLATEKLVVSYDDHQ VTSAEIIKAVTDAGYQATEEVAAGATADQDREKKQKHIAEMWQRFWISAVFTVPLLYIAM GHMVGLPLPDLLNPMTHATTFAMVQLILTLPVLYVGREFFTVGFKALFKGHPNMFSLVAL GTSAAFVYSLYGTVMIFLGDTSFTMALYYESAGVILTLITLGKYFEAVSKGKTSDAIKKL MGLAPKTAHILRDGAEIEVPVDAVQLDDIVIVRPGDKIPVDGVIVSGSSSVDEAMLTGES LPVEKKVGDAVIGASINKNGSFQFKATKVGKETALAQIIQLVEDAQGSKAPIAQLADKIS GVFVPIVIGLAVLSGLAWFFLGQESWIFALTITISVLVIACPCALGLATPTAIMVGTGKG AENGVLIKSGDALETTHKIQTIVFDKTGTITEGKPVVTDILVADSALSEAELLTLAASAE QGSEHPLGEAIVGAAKERQLPLAEGSDFSAIPGHGIRVTVNERVLLLGNIKLMKEEGIEL STFVQQADRLAEEGKTPMFVAKDGSFAGIIAVADTVKDSSQTAIARLHKMGIEAVMITGD NKRTAEAIAKQVGIDRVLSEVLPEDKALEVKKLQAEGKKVAMVGDGINDAPALAQADVGI AIGSGTDVAMESADIVLMRSDLMDVPTAVELSKATIKNIKENLFWAFAYNTLGIPVAMGV LHLFGGPLLSPMIAAAAMSFSSVSVLLNALRLKGFKPSTVKRTSGSQK >gi|237663573|gb|GG668945.1| GENE 15 11489 - 11929 398 146 aa, chain - ## HITS:1 COG:SPy1717 KEGG:ns NR:ns ## COG: SPy1717 COG3682 # Protein_GI_number: 15675568 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 6 144 1 139 144 100 35.0 1e-21 MAKDKLATITDAEWEVMRVIWTQGKTTSREVHTLLNEKKEWKSTTVKTLLSRLTDKGLVG TEKAGNKYIYYPLVEERQSVETVADELLAKVCSRKVGSVVETILTESQLSYDDLDRLEEL LKEKRKTAVESVPCNCIPGQCQCHLI >gi|237663573|gb|GG668945.1| GENE 16 12058 - 13221 1335 387 aa, chain - ## HITS:1 COG:L176399 KEGG:ns NR:ns ## COG: L176399 COG0475 # Protein_GI_number: 15673897 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, membrane components # Organism: Lactococcus lactis # 7 384 7 379 379 239 43.0 8e-63 MEFLGILCLILITTTLAGVACKRVGIPAVIGQLLVGIVLGPAMLNIVHQDVFVHDFSEIG VIMLMFIAGMECELELLKKYAKPSVMVAILGIVLPVGFTMLIGQLFAFSWKEAFFLGLVL AATSVSISVEVLRELNVLSSKEGATILGASVVDDIVVVIILSVAVGMIGASTGGNTEVSF IVKLIEQGLFFIGIFFLVRFIAPYLLRLSQKMNIGSSVIIMSLIICLGMAYLADLVGLSS VVGAFFAGIAVGQTDAKTEIDFNIEAIGYAVFIPVFFASIGLSVTFNTLGKDLPFILVMT IMAILTKLLGGAWGAKMVGFSNTSSLMVGAGMVSRGEMALIIAQIGYQSKLLSEAYYTSM IVVIILTTLVAPFLLKYFVKKQESALQ >gi|237663573|gb|GG668945.1| GENE 17 13242 - 14609 1031 455 aa, chain - ## HITS:1 COG:BS_yubG KEGG:ns NR:ns ## COG: BS_yubG COG0168 # Protein_GI_number: 16080162 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Bacillus subtilis # 2 455 5 445 445 284 40.0 3e-76 MKHQIKRRLYISPVQTIVLGFFLLIVVGTILLMMPFSAQAGQKTQWIDAFFVATSAVCVT GLSPLNTAEHWSPIGQVIIMILIELGGLGFLTVATIFFSLLRKKASLSVRMLYQEALNVS EVSGVFRLMKYIMKFAAIIQLLGAFLLSFQFVPTFGWKKGMFFSLFHAVSAFCNAGFDLL GDSMVPYQNSPYLLLVISFLIIAGGLGFIVWRDIFAMIKGYKNKIKHRVSIHTRLALTVT ATFLVLGTVIFYISEYRHFPADMSFWQRLVNSWFLSVTPRTAGFYSVDYLKMSNPGLIVT ILWMFIGGTSGSTAGGLKTTTFGVLFLQFRAIFKGKQRVEFHERTVPERVVLQAFTLFFL ATFLCVTASVILSFTETLPLKNGIEYIVFEVVSAFGTVGLTMGLTPDLTVFGKLVIIFLM FVGRVGVYTVLLSLIKKGLESQSKVQYPKESVMIG >gi|237663573|gb|GG668945.1| GENE 18 14741 - 15283 580 180 aa, chain - ## HITS:1 COG:BS_ywjB KEGG:ns NR:ns ## COG: BS_ywjB COG0262 # Protein_GI_number: 16080775 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Bacillus subtilis # 1 176 1 173 174 121 38.0 8e-28 MAREVILFIAASIDGFIADKAGGVAWLEENIRGDEEDRSYDEMYEKIDTVVMGRTTYDQV TQELPPDVYFYEDKHSYIITSHPEPSTASRTFTKEDPVTLIRRIKEEDGAGIWIVGGPKV VQPLLAADLIDTFILTTIPLFLGEGIALYETMDQSIPVRLKQVYQKNELVYSIYQRENKN >gi|237663573|gb|GG668945.1| GENE 19 15530 - 16291 650 253 aa, chain + ## HITS:1 COG:L17893 KEGG:ns NR:ns ## COG: L17893 COG1737 # Protein_GI_number: 15672394 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 1 241 2 241 248 207 42.0 1e-53 MFDLEKVQTLNELEMLVYHYVLEHLHQIPQQTIRQLATSCHVSTSTILRFCNKMGYAGFS ELKYAVKEEAKQTQTFENFYDATVHVDAFLKKLNQETYYEMLRPAIQMIVQARHVAFTGI GTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGFENTLALILSVSGETNEMIKQMTDF KTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTTQIPVIALIELLAHQ ASQLLKELDETPS >gi|237663573|gb|GG668945.1| GENE 20 16465 - 17799 1159 444 aa, chain + ## HITS:1 COG:CAC0386 KEGG:ns NR:ns ## COG: CAC0386 COG1455 # Protein_GI_number: 15893677 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Clostridium acetobutylicum # 5 426 7 444 450 411 51.0 1e-114 MNEWINEKLLPPVLKFVNTKAITALRNGMLYTMPFTIVGSVFLLLANFPVTAISEWVNAS GLAVYFNQAYGASFAIMSLFAVIGIAYSYVKSEGFEGLPAGMIAMVVFILFMSSEVKDAV SGAVVGNVINKDWTAGKGMITAIIVGLLVGVVYSWFLRHDIRIKLPEAVPENVANSFTAL IPASVIVTGAMLIFILLDKVFNTTFFDFIYEVLQSPLQGVTDSLGGALLLGFVIPLFWFF GVHGSTIVGGIMGPILQANSLENTEILKSGKDLTLANGGHIVTQQFLDQFLTVTGAGMTI GLVVFMVFFAKSAQFKQLGRLSIGPAVFNINEPIVFATPIVMNPIMAVPFIITPIVSSVV TYFALYTGLVPLFTAVQVPWTTPPIISGLLVGGWQAALLQVVVLTMSFFIYLPFAKKMDA LNYAEETNQPITEETLEKVEAQNV >gi|237663573|gb|GG668945.1| GENE 21 17826 - 19256 1368 476 aa, chain + ## HITS:1 COG:L22116 KEGG:ns NR:ns ## COG: L22116 COG2723 # Protein_GI_number: 15672399 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Lactococcus lactis # 4 476 3 478 478 773 76.0 0 MSILKNDFLWGGAVSAHQLEGGWDQGGKGVSVADVMTAGAHGVPRKITAGVLPDEHYPNH EAIDFYHRYQEDIQLFKELGLNCFRTSIAWTRIFPNGDEETPNEEGLRFYDALFDECLKN GIEPVVTLSHFEMPYHLVTKYGGFRNRQVIDFFVKFAEVCFTRYQKKVKYWMTFNEINNQ ANYEEDFAPFTNSGIAYQEGEDREAIMYQAAHYELVASARAVKIGHAINPDFQIGCMIAM VPIYPYSCNPEDMMMSVSAMQKRYWFTDVHVRGHYPSAIQCYLKRKNISLDVTEEDLTDL ANGCVDYIGFSYYMSFAVKGAEKAPTFDYNEAKDLVRNPYVATSDWGWQIDPMGLRYAMN WFNDRYELPLFIVENGFGAIDELEPDGTINDTYRIAYLREHIEMMKEAVAYDGIDLMGYT PWGFIDLVSASTGEMKKRYGFIYVDKDNDGHGTLERRKKKSFAWYQQVIATNGEEL >gi|237663573|gb|GG668945.1| GENE 22 19293 - 20429 1461 378 aa, chain - ## HITS:1 COG:HP0106 KEGG:ns NR:ns ## COG: HP0106 COG0626 # Protein_GI_number: 15644736 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Helicobacter pylori 26695 # 1 376 1 376 380 528 68.0 1e-150 MKFNTKLIHGGISKDTTTGAVSVPIYQTSTFEQNGVGQPKEYEYSRSGNPTRHALETLIA ELEGGSHGFAFSSGLAGIHAIISMFGPEDHILLGDDVYGGSFRLLDKVFVANGLSYTIVN ASDLATIEAAIQPNTKALFLETPSNPLLKITDIEAAAKLAKKHQLLTIVDNTFATPYFQR PLALGADIVVHSGTKYLGGHSDVVSGLVVTNHPESAEKIAFLQNAIGAVLGPHDSWLVQR SLKTLGVRMAAHAQNAQKIAEFLEAHPAVATVYYPGLASHPGHEIAQKQMSGFSGMISFE LAKDEQVVPFVETLEIFTLAESLGGVESLIEVPAIMTHASIPKENREAVGIKDGLIRLSV GIEADEDLLADLEKGLQA >gi|237663573|gb|GG668945.1| GENE 23 20443 - 21360 1053 305 aa, chain - ## HITS:1 COG:HP0107 KEGG:ns NR:ns ## COG: HP0107 COG0031 # Protein_GI_number: 15644737 # Func_class: E Amino acid transport and metabolism # Function: Cysteine synthase # Organism: Helicobacter pylori 26695 # 1 304 2 305 306 397 67.0 1e-110 MIVQSILDTIGATPLFEFTSEQYPMPEGTKIYAKLEYLNPGGSVKDRLGVHLLKEAMKTG KINQATTIIEPTAGNTGIGLALAASQLGLKTIFVVPEKFSQEKQQLMQALGAKIVPSPTE QGIVGAITSAKDLAKEIPNSYVPLQFENPDNPAAYYEGLGPEIVQDLGGKITSFVAGLGS GGTFAGVGRYLKEQNSKTQLWGVEPEGSILNGGPAHGHEIEGIGVEFVPPFLKQIPVDGF YTISDEDGFFWVKQLAKKSALLVGSSSGAAFAAALREARRLPAGSTIVTIFPDGSDRYLS KNIYS >gi|237663573|gb|GG668945.1| GENE 24 21450 - 21587 199 45 aa, chain - ## HITS:1 COG:no KEGG:EF0288 NR:ns ## KEGG: EF0288 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 45 1 45 45 71 100.0 1e-11 MTKKQASLFLETESCCCMVQNSAAYSFVMGKTSVISEKLPNTIPL >gi|237663573|gb|GG668945.1| GENE 25 21756 - 22316 853 186 aa, chain - ## HITS:1 COG:SPy1821 KEGG:ns NR:ns ## COG: SPy1821 COG0231 # Protein_GI_number: 15675650 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Streptococcus pyogenes M1 GAS # 1 185 1 185 185 258 74.0 4e-69 MIAASDLKAGMTFEQDGKLIKVMEASHHKPGKGNTVMRMKLKDVRTGSTTDTTMRPDEKV KKAHIDTKPVQYLYSQDDMAIFMDLETYEQYEVPTALIEEELKYLLENMEVKIQFYGEEV IGLTLPTTVILRVAETQPSIKGATVTGSGKPATMETGLVVNVPDFVEADELLEINTAEGT YLKRAK >gi|237663573|gb|GG668945.1| GENE 26 22671 - 23318 657 215 aa, chain + ## HITS:1 COG:no KEGG:EF0286 NR:ns ## KEGG: EF0286 # Name: not_defined # Def: fibronectin-binding protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 215 1 215 215 422 99.0 1e-117 MNPTIQPYQFNIIKEQVAVLLNTYTSVNDATTVKTVQALCAEKINGLFPEEHPAVTILLD KVMDRRLTRARAEKYLDELKETVLPFKEPSTPQVTKVFRKVKKLKIPEWENMDLRNNTYV GWNDAGTQKKFILAYRENKLIGVHGTLSPTIVKGVCSICQTITNVSMFLATTKSGGDGTY TKKGNYICHDSDTCNQQLTQPEYLEAFMENVKAVK >gi|237663573|gb|GG668945.1| GENE 27 23357 - 24292 1145 311 aa, chain - ## HITS:1 COG:L192589 KEGG:ns NR:ns ## COG: L192589 COG0167 # Protein_GI_number: 15673534 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Lactococcus lactis # 3 311 2 311 311 438 67.0 1e-123 MDISVEFSGHKLANVLMNASGIHCMTIKEMDELAASQAGAFVAKTETPNPRQGNEEPRYF DTPLGSINSMGLPNLGIDYYLDYQIARQKEFPEELRFLSVSGMNYEENIAILKKVQESEY TGVTEFNLSCPNLPGKPQIAYDFELTEKLLTEVFQFFTKPLGVKLPPFFDIAHFDAMAEI LNKFPLVYVNSINSIGNGLYIDSDKEEVVIKPKGGFGGLGGEYVKPTALANVRAFAQRLK PEIKIIGTGGITCGKDVFEHLLCGATLVQVGTQLHQEGPQVFERLAKELQEIMAAKGYES IEEFRGKLKEM >gi|237663573|gb|GG668945.1| GENE 28 24470 - 24904 639 144 aa, chain - ## HITS:1 COG:L160425 KEGG:ns NR:ns ## COG: L160425 COG0764 # Protein_GI_number: 15672547 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Lactococcus lactis # 2 142 4 143 151 197 71.0 6e-51 MKKVMTATEIMEMIPNRYPICYIDYVDEIIPNEKIIATKNVTINEEFFQGHFPGNPTMPG VLIIEALAQVGSILILKMDQFEGETAYIGGINKAKFRQKVVPGDVLKLHFEIVKLRDFVG IGKATAYVEDKKVCECELTFIVGR >gi|237663573|gb|GG668945.1| GENE 29 24906 - 26144 1445 412 aa, chain - ## HITS:1 COG:CAC3573 KEGG:ns NR:ns ## COG: CAC3573 COG0304 # Protein_GI_number: 15896807 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Clostridium acetobutylicum # 2 410 3 411 411 440 56.0 1e-123 MKRVVITGMGAVTPLGNTVKEFWHNLVDGKLGIGKITKFDSEDTGVALAGEVKEFDPSAV LERKEQKRMDLFSQYGLVAALEAWEMSGLTEATIDPTRLGVIVGSGIGGMTTLQDQVRVM DKKGAKRVTPFFVPMVIANMAAGNISIRLGAKGPSQTIVTACASATNAIGEAFRTIKYGL ADMMVTGGTEATVCEIGIAGFAALNALNTTEDATRASIPFDKERKGFVMGEGAGMLVLEE LEHAQKRGATIYGEIVGYGSNCDASHMTAPLKDGSGAAAAMEMAIAEAGITPEQIGYINA HGTSTPANDAAETTAIKRVFGERASQIPISSTKSMTGHLLGAAGGIEAIACVQTLQEGKA HPTVGYQVADPDCDLDYVTEGARDITADYTISNSFGFGGHNGVICLKKWEEN >gi|237663573|gb|GG668945.1| GENE 30 26442 - 27194 1027 250 aa, chain + ## HITS:1 COG:L161132 KEGG:ns NR:ns ## COG: L161132 COG0623 # Protein_GI_number: 15672548 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Lactococcus lactis # 1 250 1 250 250 337 71.0 1e-92 MFLQNKNVVVMGVANKKSIAWGCAKALKDQGANVIYTYQNERMKKQVVKLADENDLLVEC DVASDASIQAAFETIKNEVGTIDGLVHAIAFAKKEELSGNVSDITRDGFLLAQDISSYSL LAVTHYAKPLLNPGSGIVTLTYLGSERAIPNYNMMGIAKASLETAVKYLAFELAADKIRV NGISAGAIKTLAVTGVKDYDQLISISNERTPDKTGVTIEEVGNTCAFLVSELASGVVGDI IYVDKGVHLT >gi|237663573|gb|GG668945.1| GENE 31 27293 - 27691 407 132 aa, chain - ## HITS:1 COG:no KEGG:EF0281 NR:ns ## KEGG: EF0281 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 132 1 132 132 241 96.0 8e-63 MQEAIITSTVDLTSGGCNACGLVEDTVYTLAMNGVNIPLDGLTVAHLVSAVVARNGFKQE LQMDMLDDEYILYRKEDTAVTFKETYNHLSYDNGSEKIQSKNKLEDLPKLFEQVNQILTT VFGIETVNFIIE >gi|237663573|gb|GG668945.1| GENE 32 27736 - 28671 1178 311 aa, chain - ## HITS:1 COG:L67760 KEGG:ns NR:ns ## COG: L67760 COG0053 # Protein_GI_number: 15673428 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Lactococcus lactis # 1 310 1 310 314 392 69.0 1e-109 METKKSSGMFAVIAALIANILVAISKFVGFALSGSTAMMNESIHSVVDCSNQVLLLFGNK RASRGQSALHQFGEGRAKYFFSTIVATMLFFGGGALGVMEAIQKLLHPSHEVENVAIVIG ILIFGLLVEGSSLRVAMKEIKELNTEKLSLLKFLRESRHSEILIIFTEDFCAVIGLCLAL VGTLLTMVTGIAAFDAISGLLIGLLLMCAAIFLAKEFYSLIIGESVTATDLAKIKTAFDR ADVEKLIDVKTVHLGPTEILVAAKIDVVEPMEEDAPDVVNAIERDIRSKMPDKKIYIYIE VDDYDVNYVRK >gi|237663573|gb|GG668945.1| GENE 33 28814 - 29488 715 224 aa, chain - ## HITS:1 COG:BH2835 KEGG:ns NR:ns ## COG: BH2835 COG1418 # Protein_GI_number: 15615398 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Bacillus halodurans # 11 222 3 213 215 216 51.0 3e-56 MFENESLSFEEQTIIQAAERYVQQELANEASGHDWWHIYRVTQLAKTIAEKEQANLFLCI LTALLHDIGDEKFNESEEAGLLKVQQWLEANDVSTEQTNHILSIIANMSFKGGNTGKTVT TLEGKVVQDADRLDAIGAIGIARVMAYSGNKGRLIHDPHKQPREQLTQEEYRNGEDTAIM HFYEKLLKLKEQMNTNYGRLLAEKRHQFMELYLEEFYQEWDGHR >gi|237663573|gb|GG668945.1| GENE 34 29501 - 30013 255 170 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 10 162 20 172 185 102 33 3e-21 MNNYQWYTEQWGKPTREDDLLFLLLTVGVFQVGLSWKAAAGKKVAFMKNFCQMKPEKVAA LLPDEVDRIVADPDMIRNRRKIEATIKNAQAILKVQEEFGSFANYLWQFVKNVPVLSIYE EAYQVPRTQLLSDNVAKDLKKRGFSFVGPIVTNMFLKASGIIQVEILNPE >gi|237663573|gb|GG668945.1| GENE 35 30026 - 30517 599 163 aa, chain - ## HITS:1 COG:lin2344 KEGG:ns NR:ns ## COG: lin2344 COG0350 # Protein_GI_number: 16801407 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Listeria innocua # 2 162 1 152 160 158 50.0 5e-39 MVKKIYYAQQEWQKDHYYLGVTDAGLAFVGSANQSIEELKNWYPQAQLEASEKKTAPYKE ALISYLNQHSTTFAYPIDIEGTPFQKEVWQALQEIPYGETMTYQEISEKIGRPRAVRAVG TAIGKNPLLMVIPCHRVIGSKGQLTGYRGGLAMKQALLTFEQS >gi|237663573|gb|GG668945.1| GENE 36 30655 - 31221 361 188 aa, chain + ## HITS:1 COG:lin2345 KEGG:ns NR:ns ## COG: lin2345 COG2169 # Protein_GI_number: 16801408 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Listeria innocua # 3 185 2 184 184 189 48.0 2e-48 MKTTYRLTQKRWEAIQNNNTQFDGDFFYGVTTTKIFCRPSCPSRVPNKNHVLIFKTAQEA LTLGFRPCKRCQPTGQVVPNEEWVAQIKQFIDRHSAEPLSLDYLAQACHGSPFHLQRTFK EQTKQTPLAYLTSVRIRQAQELLLHSPLTIQQIAKKVGFQTAAYFATTFKKETGVTPSVY RSKNEPKK >gi|237663573|gb|GG668945.1| GENE 37 31239 - 31982 566 247 aa, chain - ## HITS:1 COG:L130660 KEGG:ns NR:ns ## COG: L130660 COG0596 # Protein_GI_number: 15673278 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Lactococcus lactis # 6 241 9 245 249 216 49.0 4e-56 MKNRTKSRWKKIVLGLGLFLVILVIGLTIFIKNSTYQATDSALKISQSATQEKNYDYYTN GQKNDTALIFYPGALVAPASYSEWAQEVATKGYDVYVVHFPLNLAVLAPNAAEQIIKDHP QQNFVLAGHSLGGVMASRFVAENEQRIKGMIYLASYPDEKGALNKQNLPVLSITATNDGV LNWTSYQKAKQFLPKDTQYVSIKGGNHAGFGNYGVQKGDNKATISNEQQQTEISQLIVAW LQSRPNK >gi|237663573|gb|GG668945.1| GENE 38 32120 - 32938 977 272 aa, chain - ## HITS:1 COG:lin0517 KEGG:ns NR:ns ## COG: lin0517 COG0406 # Protein_GI_number: 16799592 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Listeria innocua # 1 269 1 270 270 288 58.0 8e-78 MKKRLTIVGMLFLAILVMVGCGKNQQATTKEKETKPEELTLYIVRHGKTMLNTTDRVQGW SDAVLTPEGEKVVTATGIGLKDVAFQNAYSSDSGRALQTAQLILDQNKAGKDLEVVRDPD LREFNFGSYEGDLNKTMWQDIADDQGVSLEEFMKNMTPESFANSVAKLDQQREESKNNWP AEDYATITKRLKKGLDKIVATESANSGNGNVLVVSHGLSISALLATLFDDFKVPEGGLKN ASVTTIHYKNGEYTLDKVNDVSYLEAGEKESK >gi|237663573|gb|GG668945.1| GENE 39 32959 - 34425 1447 488 aa, chain - ## HITS:1 COG:lin0017 KEGG:ns NR:ns ## COG: lin0017 COG2723 # Protein_GI_number: 16799096 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 3 485 6 476 477 551 55.0 1e-156 MGFPENFLWGGATAANQYEGGYLSGGKGLSTLDAITGGSQTEPRRITYLTKEGQKASCTR DQALPEGAIGYIDEELYYPSHVATDFYHHYEEDIALFAEMGFKCFRLSIAWSRICPNGTK EINEEGLAFYDKVFDTLLRHGIEPVVTINHFDIPMYLADEYDGWKNREVIDFFVFFCETI FTRYQDKVKYWMTFNEINFLRSWTQIGIHNNDKQSKYQAVHHLFVASAKAVELGHSINPD FQIGMMVAYIPSYPLSCKPEDVMAAVQFNREQEFYMDVQAKGYYPAHKLKEFEREGMTIQ MESEDLAIIQKGTVDYIGFSYYMSTVSTAYPEEVKYVGGNQMPAVKNPYLQESEWGWAVD PLGLRISLCQLSDRYNMPLFVVENGFGAVDTLQEDGSIVDDYRIDYFKQHIEAMRTAVEE DGVNLIGYTPWGCIDLVSAGTGEMKKRYGFIYVDMDDQGQGTLKRTKKKSFNWYKQVIAS NGENLTTE >gi|237663573|gb|GG668945.1| GENE 40 34548 - 35978 1688 476 aa, chain - ## HITS:1 COG:L121426 KEGG:ns NR:ns ## COG: L121426 COG2723 # Protein_GI_number: 15673653 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Lactococcus lactis # 1 476 1 476 477 787 76.0 0 MAFRKDFLWGGATAANQCEGGYNEGGRGLANVDLAPTGPDRFPVITGEKKMFNFDEEHFY PAQEAIDMYHRYKEDIALFGEMGFKTYRLSIAWSRIFPMGDETEPNEEGLKFYEDLFKEC HKYGIEPLVTITHFDCPMHLVEEYGAWRSRKLVGFYENLCRVIFNRYKGLVKYWLTFNEI NMILHAPFMGAGLYFEEGENKEQVKYQAAHHELLASAIATKIAHEVDPENQVGCMLAAGS NYAYTCKPEDVFAARQADRENYFFIDVQSRGEYPAYALKEMARKGIQIEMEEGDEELLKE HTVDFISFSYYSSRVTSTDPEINEQTAGNIFASVKNPYLKASEWGWQIDPLGLRITMNDL YDRYQKPLFIVENGLGAVDTPDENGYVVDDYRIDYLAAHIQAMKDAVEQDGVDLLGYTTW GCIDLVSAGTGEMKKRYGFIYVDRDNEGNGTLKRSKKKSFDWYKKVIATNGEDLSN >gi|237663573|gb|GG668945.1| GENE 41 36002 - 37900 2363 632 aa, chain - ## HITS:1 COG:lin0026_2 KEGG:ns NR:ns ## COG: lin0026_2 COG1263 # Protein_GI_number: 16799105 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Listeria innocua # 85 461 3 375 399 311 50.0 2e-84 MGKYHELAEKIVKNVGGQENINSLTHCITRLRFKLKDESQANDDVLKNMDGVVTVMKSGG QYQVVIGNHVPAVYEEVVSIAGLSGEREEEASSGNLFDRLIDILSGCFQPFLGALAAAGM VKGLNALLVFLKLYTATSGTYTMLNGIGDAIFYFMPVILGYTAAKKFRLHPMVGIVIGAA LCYPTIQGSALQTAFETTAGAGAAAPYNLFGLPAYNTFMGIPWVGANYTSSVVPIIFIIA FAAQVQKVFKRIIPEVVQTFLVPFFVLLIALPIGFLVIGPIVSMLTDLLSAGFTALMSFS PALYGLILGFFWQVLVIFGLHWSVVPLAIMQVTQEGSSQVLTGSFAASFAQTAVVLAMFF KLKDKKLKALCPPAIISGIFGVTEPAIYGITLPKKWPFIYSMIGGAVGGLYLMINNVTAY TMGGLGIFGVLNFINGDDASGMIQSFIAIAIAAVVGFGLTFFFWKDNTVEEEEVIIDKTT IKKENITSPVKGRVLSLKNAEDPAFANGALGNGVVIEPTEGKVVAPFDGTIVTLFPTKHA LGLISDNGTELLIHIGIDTVQLEGEGFEAFVKQGDRVKKGQTLVTFDLEGIKKAGFSTQI PIVVTNTADYLDILEVGSNEVSTSDDLLTALI >gi|237663573|gb|GG668945.1| GENE 42 37974 - 38816 777 280 aa, chain - ## HITS:1 COG:BS_licT KEGG:ns NR:ns ## COG: BS_licT COG3711 # Protein_GI_number: 16080959 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 276 1 275 277 256 48.0 4e-68 MIIHKILNNNVVITLDDDKREQIVMGKGIAFKKRIGDWVPDESIDQVFYLANQETSLKFQ ELLGNIPLEMMKLSDDIIVYAKSTLKKSLNDTIYISLTDHLYTALERKKQGIAIKNLLLW DIKRFFPEEYEVGVNALKMVQKRVGMELSTDEAGFIALHLVNAEMEEEVGNIYELTKLMQ EITNIVKYYFKVSFDEDSVYFYRFSTHLKFFCYRLLHQREVVENDDEELYAVIKKKYLNA YRCVEKISLYLNENYDYQVSNEERLYLTIHIARIVQTTEQ Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:36:52 2011 Seq name: gi|237663572|gb|GG668946.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD25, whole genome shotgun sequence Length of sequence - 2086 bp Number of predicted genes - 5, with homology - 2 Number of transcription units - 3, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 124 - 180 10.3 1 1 Tu 1 . - CDS 219 - 320 142 ## - Prom 353 - 412 7.1 2 2 Op 1 . - CDS 484 - 669 124 ## SAUSA300_pUSA0336 hypothetical protein 3 2 Op 2 . - CDS 708 - 809 63 ## - Prom 894 - 953 8.4 + Prom 648 - 707 8.2 4 3 Op 1 . + CDS 865 - 951 70 ## + Prom 966 - 1025 5.8 5 3 Op 2 . + CDS 1050 - 2024 659 ## SAUSA300_pUSA0301 replication initiator protein Predicted protein(s) >gi|237663572|gb|GG668946.1| GENE 1 219 - 320 142 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKDLMSLVIAPIFVGLVLEMISRVLDEEDDNRK >gi|237663572|gb|GG668946.1| GENE 2 484 - 669 124 61 aa, chain - ## HITS:1 COG:no KEGG:SAUSA300_pUSA0336 NR:ns ## KEGG: SAUSA300_pUSA0336 # Name: not_defined # Def: hypothetical protein # Organism: S.aureus_USA300 # Pathway: not_defined # 1 44 1 44 86 86 100.0 4e-16 MNEYRIQKLYRYICLEFKNQRQLIGKRQEEVAFDLSVTAGHLSRSGLCRMQLWLSSKQSY E >gi|237663572|gb|GG668946.1| GENE 3 708 - 809 63 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFNSNTILKKLKIFCCLTGQLYACNEMYLITNL >gi|237663572|gb|GG668946.1| GENE 4 865 - 951 70 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCYLLLQFVCIFIIYTTSIHYKIKATSL >gi|237663572|gb|GG668946.1| GENE 5 1050 - 2024 659 324 aa, chain + ## HITS:1 COG:no KEGG:SAUSA300_pUSA0301 NR:ns ## KEGG: SAUSA300_pUSA0301 # Name: repA # Def: replication initiator protein # Organism: S.aureus_USA300 # Pathway: not_defined # 1 324 1 319 319 519 98.0 1e-146 MSKQFFTVEENYKERFYQLPKVFFTNPNYKDLSNDAKIAYAILRDRLQLSIKNNWIDTEG NIYFIYTVADLEVILNCGNKKITKIKKELENVDLLIQKRQGLNKPNLLYLLKPAITKNDI YEIDKAENEVEALQDKEVSKGHVQKCQKDTSRNVKRTRLEMSKGHTNDTDFIDTDFIDTD FIDTESNDMNNMNDTNQHSNHSNHFSNIHDKESLKYIELQELPELIKSYINNFSYEEVKS IKSVILKAKKSFNNKYDTFYMLEDIDEELLLVLKRFKGYLVKKQEKVANMEGYLMRSIIA ELEEMHSTIMRRKNMENNPLSLFN Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:12 2011 Seq name: gi|237663571|gb|GG668947.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD26, whole genome shotgun sequence Length of sequence - 1918 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 7 - 399 305 ## smi_1705 acetyl transferase 2 1 Op 2 . + CDS 400 - 1839 1161 ## COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Predicted protein(s) >gi|237663571|gb|GG668947.1| GENE 1 7 - 399 305 130 aa, chain + ## HITS:1 COG:no KEGG:smi_1705 NR:ns ## KEGG: smi_1705 # Name: not_defined # Def: acetyl transferase # Organism: S.mitis_B6 # Pathway: not_defined # 1 130 47 176 176 259 100.0 2e-68 MEEVLIDDNMVFDIDNLKGFLNDTSSFGFIAKENNKIIGFAYCYTLLRPDGKTMFYLHSI GMLPNYQDKGYGSKLLSFIKEYSKEIGCSEMFLITDKGNPRACHVYEKLGGKNDYKDEIV YVYDYEKGDK >gi|237663571|gb|GG668947.1| GENE 2 400 - 1839 1161 479 aa, chain + ## HITS:1 COG:mll5006 KEGG:ns NR:ns ## COG: mll5006 COG1670 # Protein_GI_number: 13474178 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Acetyltransferases, including N-acetylases of ribosomal proteins # Organism: Mesorhizobium loti # 11 157 12 150 173 63 31.0 7e-10 MNIVENEICIRTLIDDDFPLMLKWLTDERVLEFYGGRDKKYTLESLKKHYTEPWEDEVFR VIIEYNNVPIGYGQIYKMYDELYTDYHYPKTDEIVYGMDQFIGEPNYWSKGIGTRYIKLI FEFLKKERNANAVILDPHKNNPRAIRAYQKSGFRIIEDLPEHELHEGKKEDCYLMEYRYD DNATNVKAMKYLIEHYFDNFKVDSIEIIGSGYDSVAYLVNNEYIFKTKFSTNKKKGYAKE KAIYNFLNTNLETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKR DIASFLRQMHGLDYTDISECTIDNKQNVLEEYILLRETIYNDLTDIEKDYIESFMERLNA TTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTN FGEDILRMYGNIDIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEIYKRTYKD Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:16 2011 Seq name: gi|237663570|gb|GG668948.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD27, whole genome shotgun sequence Length of sequence - 1534 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 10 - 69 4.3 1 1 Tu 1 . + CDS 133 - 1473 668 ## COG3464 Transposase and inactivated derivatives Predicted protein(s) >gi|237663570|gb|GG668948.1| GENE 1 133 - 1473 668 446 aa, chain + ## HITS:1 COG:SP1582 KEGG:ns NR:ns ## COG: SP1582 COG3464 # Protein_GI_number: 15901424 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 417 1 402 418 251 37.0 3e-66 MSYSEFTKELLDILDLNLIFHEDAFRKERINDETCFVFDATLTYQPEECFHCHYQNKQTI IKWGWKKVSILLNDVSNYKTILRINKQRFKCKHCGKTFLAEDSVSDRRCSIARRVKQAIL ELLSEPISMSLIARMKHISPTTVIRILRSLRPKTVSLNQPLPEVVCFDEFKSVKNVSGAM SFVMMDGKTHQLIDIVENRQLNPLRDYFLRYPRKVREQVRLVVSDFYTPYRTLVKECFPN ARIVADRFHISQHIGRAFTNHRIQVMKTFKKGDRRSKHLKKYWRLLQKNAWELNGQHRYW RPSFRDHLTEAEIVDRLLSYDDSLKRGYEVYQDFLSVIRRQDVPEFVALLKEDYKELPEH YQPVFTTFKKYQTEIKRALRVPYSNGPIECLNNHIKVLKRIAYGFRNFQNYRERIFLYRG KYFKKTKNTTQLTKARTTTRLDKIAV Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:16 2011 Seq name: gi|237663569|gb|GG668949.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD28, whole genome shotgun sequence Length of sequence - 1363 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 401 - 880 184 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|237663569|gb|GG668949.1| GENE 1 401 - 880 184 159 aa, chain + ## HITS:1 COG:BH0335 KEGG:ns NR:ns ## COG: BH0335 COG2801 # Protein_GI_number: 15612898 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 1 156 1 157 261 162 50.0 2e-40 MCRILGLSRQSYYYQSKPKKDESELEEVVAEEFIRSRKAYGSRKIKKALSKRGIQISRRK ISRIMKNRGLKSSYTVAYFKVHHSTCNEAKTTNVLNRKFLRDNPLEAIVTDLTYVRVGKK WNYVCFILDLFNREILGYSCGEHKDAVLVKKAFSRINNL Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:17 2011 Seq name: gi|237663568|gb|GG668950.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD29, whole genome shotgun sequence Length of sequence - 1075 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 1073 740 ## EF2280 hypothetical protein Predicted protein(s) >gi|237663568|gb|GG668950.1| GENE 1 2 - 1073 740 357 aa, chain + ## HITS:1 COG:no KEGG:EF2280 NR:ns ## KEGG: EF2280 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 357 115 471 815 694 100.0 0 FKLIATDEEVNLKSLKKSFFSGFQEFIYEVNHHLMGDFVSLSNEEIRRYTKLEKLMESKL ARRFKVRRVNPSDLTYLIEHIYGEKGTPFEEYAFQLPKKKLKSETLVKRYDLLRPSRCLI EEKPRYLRIEHENHESYVTYLTINTIVGEMEFPSSELFYYQQQQFAFPIDTSMNVEIVTN KKALAIVRNKKKELKDLDNHAYQSDNETNSNVLDALDSVDELETTLDQSKESMYKLSYVV RVRAESVDELKRRCDEVFDFYDDTNVKLVRPFGDTMGLHEEFLPASKRYMNDYIQYVTSD FLAGLGFGATQMLGELEGIYFGYNADTGRNVYLKPALASQGVKGSVTNALAAAFLGS Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:24 2011 Seq name: gi|237663567|gb|GG668951.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD30, whole genome shotgun sequence Length of sequence - 958 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 719 769 ## COG1087 UDP-glucose 4-epimerase 2 1 Op 2 . + CDS 723 - 957 215 ## COG1087 UDP-glucose 4-epimerase Predicted protein(s) >gi|237663567|gb|GG668951.1| GENE 1 3 - 719 769 238 aa, chain + ## HITS:1 COG:lin2620 KEGG:ns NR:ns ## COG: lin2620 COG1087 # Protein_GI_number: 16801682 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Listeria innocua # 1 238 3 240 328 389 76.0 1e-108 SILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRSV FEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAATY GEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASIG EDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEY >gi|237663567|gb|GG668951.1| GENE 2 723 - 957 215 78 aa, chain + ## HITS:1 COG:lin2620 KEGG:ns NR:ns ## COG: lin2620 COG1087 # Protein_GI_number: 16801682 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Listeria innocua # 8 78 250 320 328 111 70.0 4e-25 MAAKVTSLTLVSNNGYSVKEMLDAAREVTGQEIPATIAPRRAGDPSTLIASSEKAKRVLG WQPEVTEVKDIIATAWQW Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:24 2011 Seq name: gi|237663566|gb|GG668952.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD31, whole genome shotgun sequence Length of sequence - 950 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 949 696 ## EF1878 ATP/GTP-binding protein, putative Predicted protein(s) >gi|237663566|gb|GG668952.1| GENE 1 1 - 949 696 316 aa, chain + ## HITS:1 COG:no KEGG:EF1878 NR:ns ## KEGG: EF1878 # Name: not_defined # Def: ATP/GTP-binding protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 316 473 788 815 617 100.0 1e-175 GGGKSFSNNLLVYYAVLFGGQAVIVDPKGERGGWKENLPEIADEINILNLTSKPENQGLL DPYVIMKKKKDSESLAIDILTFLTGISSRDGEKFPVLRKAIRTVTQSDQRGLLQVINELR KENSPVAENIADHIESFTDYDFAHLLFSDGSITQSISLDKQLNIIQVADLVLPDAETTFE EYTTMELLSVSMLIVISTFALDFIHSNREIFKIVDLDEAWSFLQVAQGKTLSNKLVRAGR AMNAGVYFVTQNSDDLLDERLKNNIGLKFAFRSTDIHEIKKTLEFFGLDQEDESNQKRLR DLENGQCLMQDLYGRV Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:30 2011 Seq name: gi|237663565|gb|GG668953.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD32, whole genome shotgun sequence Length of sequence - 808 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 54 - 734 459 ## COG3316 Transposase and inactivated derivatives Predicted protein(s) >gi|237663565|gb|GG668953.1| GENE 1 54 - 734 459 226 aa, chain - ## HITS:1 COG:pli0028 KEGG:ns NR:ns ## COG: pli0028 COG3316 # Protein_GI_number: 18450311 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Listeria innocua # 1 226 1 226 226 376 88.0 1e-104 MTQFKGKQFQKDVIIVAVGYYLRYNLSYREVQEILYDRGIHVCHTTIYRWVQEYGKILYQ IWKKKNKQSFYSWKMDETYIKIKGKWHYLYRAIDVDGLTLDIWLRKKRDTQAAYAFLKRL KNQFGEPKVLVTDKAPSIKSAFRKLQKNGLYITTEHRTIKYLNNLIEQDHRPIKRRNKFY QSLRTASTTIKGMEAIRGIYKKSRKEGSLFGFSVCTEIKGLLGIPA Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:30 2011 Seq name: gi|237663564|gb|GG668954.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD33, whole genome shotgun sequence Length of sequence - 779 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 87 - 278 190 ## EF2039 hypothetical protein - Prom 480 - 539 8.2 2 2 Tu 1 . + CDS 574 - 778 107 ## COG1396 Predicted transcriptional regulators Predicted protein(s) >gi|237663564|gb|GG668954.1| GENE 1 87 - 278 190 63 aa, chain - ## HITS:1 COG:no KEGG:EF2039 NR:ns ## KEGG: EF2039 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 63 1 63 63 107 100.0 2e-22 MPDTTAGRAKIREYFDDKKISLTSVATYFNIHKQDLNDYLSGKNQSKKAHETLTAIIEYY KIR >gi|237663564|gb|GG668954.1| GENE 2 574 - 778 107 68 aa, chain + ## HITS:1 COG:L105494 KEGG:ns NR:ns ## COG: L105494 COG1396 # Protein_GI_number: 15672489 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 1 64 1 64 122 82 64.0 2e-16 MDLYEKIKLLASEKKMSIRQLEETLGFGNGVINRWRKNTPGSDKLKKVADYFNISVDYLL GRTDNPNS Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:33 2011 Seq name: gi|237663563|gb|GG668955.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD34, whole genome shotgun sequence Length of sequence - 775 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 206 167 ## COG1396 Predicted transcriptional regulators - Prom 278 - 337 4.7 + Prom 237 - 296 7.0 2 2 Tu 1 . + CDS 498 - 689 183 ## EF2039 hypothetical protein Predicted protein(s) >gi|237663563|gb|GG668955.1| GENE 1 2 - 206 167 68 aa, chain - ## HITS:1 COG:lin2607 KEGG:ns NR:ns ## COG: lin2607 COG1396 # Protein_GI_number: 16801669 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 1 66 1 66 107 74 53.0 5e-14 MTLFERISYLAKKQGLSVFDLAEKLNLSRNSIYSWKKSSPKAETLEKVAEYFDVTTDYLL GRTDNPNS >gi|237663563|gb|GG668955.1| GENE 2 498 - 689 183 63 aa, chain + ## HITS:1 COG:no KEGG:EF2039 NR:ns ## KEGG: EF2039 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 63 1 63 63 84 71.0 1e-15 MPDTSVSRQKIRDYFESKGISLVSVATYFDIPRQDLIDYLNGKNKSKKAHETLLAIIDFY KIR Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:35 2011 Seq name: gi|237663562|gb|GG668956.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD35, whole genome shotgun sequence Length of sequence - 711 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 57 - 491 438 ## COG3316 Transposase and inactivated derivatives + Term 664 - 699 0.4 Predicted protein(s) >gi|237663562|gb|GG668956.1| GENE 1 57 - 491 438 144 aa, chain + ## HITS:1 COG:SA0026 KEGG:ns NR:ns ## COG: SA0026 COG3316 # Protein_GI_number: 15925732 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Staphylococcus aureus N315 # 1 144 1 144 224 241 97.0 2e-64 MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRGRGVNVHHSTVYRWVQEYAPILYQ IWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRL IKQFGKPQKVITDQAPSTKVAMLK Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:36 2011 Seq name: gi|237663561|gb|GG668957.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD36, whole genome shotgun sequence Length of sequence - 666 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 663 562 ## EF3154 hypothetical protein Predicted protein(s) >gi|237663561|gb|GG668957.1| GENE 1 1 - 663 562 220 aa, chain + ## HITS:1 COG:no KEGG:EF3154 NR:ns ## KEGG: EF3154 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 2 220 7 236 236 192 53.0 7e-48 FASLLVGSAVIGASLAPLSAQAVTTGNTPVQVEFGGGALPDGDGVTNTVRPDPDATNSDF DLLYIPVNISFDKTAISGDLSSIKSSSYANYGVGDLRGTKEGWHVTATILEMTNGEDKLT GVVSFSQAGYVLYYDEVDNSFKASGTSSNSPVAPEFPATSSITIGSGATLVGNAVSGKGQ GLWNSYMMSQRLNITTPYQQLKAGTYTGNITWNLVAGPSI Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:41 2011 Seq name: gi|237663560|gb|GG668958.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD37, whole genome shotgun sequence Length of sequence - 621 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 621 613 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) Predicted protein(s) >gi|237663560|gb|GG668958.1| GENE 1 3 - 621 613 206 aa, chain + ## HITS:1 COG:SPy1006 KEGG:ns NR:ns ## COG: SPy1006 COG3757 # Protein_GI_number: 15675010 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Streptococcus pyogenes M1 GAS # 19 196 214 379 444 128 41.0 8e-30 SAIAQGKRAHTYIWYDTWGNMDIAKTTMDYFLPRIQTPKNSIVALDFEHGALASVPDGYG GYVSSDAEKAANTETILYGMRRIKQAGYTPMYYSYKPFTLNHVNYQQIIKEFPNSLWIAA YPIDGVSPYPLYAYFPSMDGIGIWQFTSAYIAGGLDGNVDLTGITDSGYTDTNKPETDTP ATDAGEEIEKIPNSDVKVGDTVKVKF Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:42 2011 Seq name: gi|237663559|gb|GG668959.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD38, whole genome shotgun sequence Length of sequence - 566 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 566 657 ## EF_B0011 aggregation substance PrgB Predicted protein(s) >gi|237663559|gb|GG668959.1| GENE 1 2 - 566 657 188 aa, chain - ## HITS:1 COG:no KEGG:EF_B0011 NR:ns ## KEGG: EF_B0011 # Name: prgB # Def: aggregation substance PrgB # Organism: E.faecalis # Pathway: not_defined # 2 188 781 967 1305 357 100.0 1e-97 AKIYYEVKSSERPANYGGITEEWGMNDVLDTTHDRFTGKWHAITNYDLKVGDKTLKAGTD ISAYILLENKDNKDLTFTMNQALLAALNEGSNKVGKQAWSVYLEVERIKTGDVENTQTEN YNKELVRSNTVVTHTPDDPKPTKAVHNKKGEDINHGKVARGDVLSYEMTWDLKGYDKDFA FDTVDLAT Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:46 2011 Seq name: gi|237663558|gb|GG668960.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD39, whole genome shotgun sequence Length of sequence - 558 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 557 396 ## EF_B0011 aggregation substance PrgB Predicted protein(s) >gi|237663558|gb|GG668960.1| GENE 1 2 - 557 396 185 aa, chain - ## HITS:1 COG:no KEGG:EF_B0011 NR:ns ## KEGG: EF_B0011 # Name: prgB # Def: aggregation substance PrgB # Organism: E.faecalis # Pathway: not_defined # 1 185 248 432 1305 331 100.0 1e-89 YEKEVAEYNKHKNENSYVNEAISKNLVFDQSVVTKDTKISSIKGGKFIKATDFNKVNAGD SKDIFTKLRKDMGGKATGNFQNSFVKEANLGSNGGYAVLLEKNKPVTVTYTGLNASYLGR KITKAEFVYELQSSPSQSGTLNAVFSNDPIITAFIGTNRVNGKDVKTRLTIKFFDASGKE VLPDK Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:49 2011 Seq name: gi|237663557|gb|GG668961.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD40, whole genome shotgun sequence Length of sequence - 530 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 5 - 493 247 ## EF2017 terminase, large subunit, putative Predicted protein(s) >gi|237663557|gb|GG668961.1| GENE 1 5 - 493 247 162 aa, chain + ## HITS:1 COG:no KEGG:EF2017 NR:ns ## KEGG: EF2017 # Name: not_defined # Def: terminase, large subunit, putative # Organism: E.faecalis # Pathway: not_defined # 1 154 283 436 463 300 98.0 9e-81 MYQKFSTYETRSNYIKIWNYTDTADTGADNLCSIVFGETEDHKAEVLDVLFTKEPMEKTE TAHAEQIKNNQVNHVRIESNSGGRGFSRNSERIVKERGYRGAYYEPFHQSANKQSRILSN SALVENIVYFPSDWKIRWPEFYEAMTTYQREGKNNTMMHQML Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:53 2011 Seq name: gi|237663556|gb|GG668962.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD41, whole genome shotgun sequence Length of sequence - 529 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 7 - 80 71.5 # Arg ACG 0 0 - TRNA 95 - 180 68.1 # Leu TAA 0 0 - TRNA 196 - 267 85.5 # Gly GCC 0 0 - TRNA 272 - 347 98.3 # Thr TGT 0 0 - TRNA 354 - 435 71.9 # Leu TAG 0 0 - TRNA 452 - 524 88.6 # Lys TTT 0 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:54 2011 Seq name: gi|237663555|gb|GG668963.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD42, whole genome shotgun sequence Length of sequence - 496 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 494 471 ## EF2003 tape measure protein, putative Predicted protein(s) >gi|237663555|gb|GG668963.1| GENE 1 2 - 494 471 164 aa, chain + ## HITS:1 COG:no KEGG:EF2003 NR:ns ## KEGG: EF2003 # Name: not_defined # Def: tape measure protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 164 53 216 974 289 100.0 2e-77 FVGNFLASGATKIISKGIGLITSNIDGAINRVDTLNNANRVFENMGFSAGETSKTMDSLK KSIQGLPTPLDSAIKGVQLIASSTNDLGKSEQIFAALNNGILGFGGSAEMVENAIIQLSQ SFSNGKVDAETWNSMINSGLGPALNALAKQMGLTAGQMKAGLSD Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:37:57 2011 Seq name: gi|237663554|gb|GG668964.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD43, whole genome shotgun sequence Length of sequence - 495 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 382 384 ## EF2003 tape measure protein, putative Predicted protein(s) >gi|237663554|gb|GG668964.1| GENE 1 2 - 382 384 126 aa, chain + ## HITS:1 COG:no KEGG:EF2003 NR:ns ## KEGG: EF2003 # Name: not_defined # Def: tape measure protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 115 53 167 974 202 97.0 4e-51 FAGNFLASGATKIISKGIGLITSNIDGAINRVDTLNNANRVFENMGFSAGETSKTMDSLK KSIQGLPTPLDSAIKGVQLIASSTNDLGKSEQIFAALNNGILGFGGSAEMVDNALSSFPN RSQMVK Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:01 2011 Seq name: gi|237663553|gb|GG668965.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD44, whole genome shotgun sequence Length of sequence - 436 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 436 272 ## EF2016 portal protein Predicted protein(s) >gi|237663553|gb|GG668965.1| GENE 1 1 - 436 272 145 aa, chain - ## HITS:1 COG:no KEGG:EF2016 NR:ns ## KEGG: EF2016 # Name: not_defined # Def: portal protein # Organism: E.faecalis # Pathway: not_defined # 2 145 201 344 490 223 82.0 1e-57 AHQKKFFEELKVITKETILTYSRYVETDLMASAGTFKLLSEEKNPLETFYLSEFKNNTNR YCDFEVAEEISDAFDRSLSDQQNEVEQFKLAYMMISGSRLNEEEAQKMMEQLGVINLPDP QAKVGYVTKNINKEFNEYHLNQLKK Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:04 2011 Seq name: gi|237663552|gb|GG668966.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD45, whole genome shotgun sequence Length of sequence - 436 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 436 285 ## EF2016 portal protein Predicted protein(s) >gi|237663552|gb|GG668966.1| GENE 1 1 - 436 285 145 aa, chain - ## HITS:1 COG:no KEGG:EF2016 NR:ns ## KEGG: EF2016 # Name: not_defined # Def: portal protein # Organism: E.faecalis # Pathway: not_defined # 2 145 201 344 490 263 100.0 1e-69 AHQKKFFEEMKVITKERIRIYSRYIEFNLVSVSGTFKLIEEVENPLETFYLSEFKNNTNR YCDFEVAEELSDAFDRSLSDQQNEVEQFKLAYMAISGSILDEEKAQRMMEQLGILNLPDP QAKVGYVTKDINKDFNEYHLNQLKK Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:07 2011 Seq name: gi|237663551|gb|GG668967.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD46, whole genome shotgun sequence Length of sequence - 433 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 264 356 ## EF0149 aggregation substance, putative Predicted protein(s) >gi|237663551|gb|GG668967.1| GENE 1 1 - 264 356 87 aa, chain + ## HITS:1 COG:no KEGG:EF0149 NR:ns ## KEGG: EF0149 # Name: not_defined # Def: aggregation substance, putative # Organism: E.faecalis # Pathway: not_defined # 1 83 103 185 1305 127 96.0 1e-28 SSATPNDTTNVQQPTAEAEKSAQEQPVVSPETTNEPLGQPTEVAPAENEANKSTSIPKEF ETPDVDKAVDEAKKDPNITVVEKQQKT Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:10 2011 Seq name: gi|237663550|gb|GG668968.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD47, whole genome shotgun sequence Length of sequence - 429 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 17 - 211 124 ## EF2018 hypothetical protein 2 1 Op 2 . - CDS 178 - 429 144 ## EF0332 hypothetical protein Predicted protein(s) >gi|237663550|gb|GG668968.1| GENE 1 17 - 211 124 64 aa, chain - ## HITS:1 COG:no KEGG:EF2018 NR:ns ## KEGG: EF2018 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 63 90 152 153 97 79.0 2e-19 MEITKKVTKQVAPNPTAAIFWLKNRKPDEWRDRKETQISGEMSVSNPFTNLSEEELRRLA KDDG >gi|237663550|gb|GG668968.1| GENE 2 178 - 429 144 83 aa, chain - ## HITS:1 COG:no KEGG:EF0332 NR:ns ## KEGG: EF0332 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 83 17 99 149 107 73.0 2e-22 EGWARDGLIDKQIAQNIGVSERTFTDWKKKFSSISSALKKGKEVVDRQVENALFKSATGY EYTEVTEELTEKVWKLQKRLQNK Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:14 2011 Seq name: gi|237663549|gb|GG668969.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD48, whole genome shotgun sequence Length of sequence - 425 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 424 264 ## EF2248 hypothetical protein Predicted protein(s) >gi|237663549|gb|GG668969.1| GENE 1 1 - 424 264 141 aa, chain - ## HITS:1 COG:no KEGG:EF2248 NR:ns ## KEGG: EF2248 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 141 295 435 1004 244 100.0 1e-63 LDVSNFDTSQVTNMRGMFFLCTGLQTLDVSNFDTSQVTDMNNMFAGCKALQTLDLSNFNT NQVTDMAGMFSSCDKIQTVNVSNFDTSQVTNMRGMFSHCWELQALDVTKFDTSKVTDMSD MFYGCKELQTLDVSNFDTSQV Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:17 2011 Seq name: gi|237663548|gb|GG668970.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD49, whole genome shotgun sequence Length of sequence - 424 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:17 2011 Seq name: gi|237663547|gb|GG668971.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD50, whole genome shotgun sequence Length of sequence - 418 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 55 - 234 174 ## Clole_0536 transposase IS3/IS911 family protein Predicted protein(s) >gi|237663547|gb|GG668971.1| GENE 1 55 - 234 174 59 aa, chain + ## HITS:1 COG:no KEGG:Clole_0536 NR:ns ## KEGG: Clole_0536 # Name: not_defined # Def: transposase IS3/IS911 family protein # Organism: C.lentocellum # Pathway: not_defined # 1 59 1 59 192 73 61.0 2e-12 MAKYSFEFKLKLVHDYLSGQGGLRFLAKKYGFKDSSQISKWINAYKELGEEGLLRSRKK Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:20 2011 Seq name: gi|237663546|gb|GG668972.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD51, whole genome shotgun sequence Length of sequence - 412 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 31 - 412 209 ## EF2016 portal protein Predicted protein(s) >gi|237663546|gb|GG668972.1| GENE 1 31 - 412 209 127 aa, chain + ## HITS:1 COG:no KEGG:EF2016 NR:ns ## KEGG: EF2016 # Name: not_defined # Def: portal protein # Organism: E.faecalis # Pathway: not_defined # 1 127 1 127 490 238 100.0 4e-62 MFQNNLSLKRYKRLRTKYSTQINEEVFDPNDFITEMKPFFDDRERKYKAYTSEQNEIDRR PKPNTKIIKVNNKLHAGLYNTIVDQAADHFTGIPIKWDYDITEQRRSIMQRAKDLFLNNT LKNTKTP Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:23 2011 Seq name: gi|237663545|gb|GG668973.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD52, whole genome shotgun sequence Length of sequence - 412 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 32 - 410 244 ## EF2016 portal protein Predicted protein(s) >gi|237663545|gb|GG668973.1| GENE 1 32 - 410 244 126 aa, chain + ## HITS:1 COG:no KEGG:EF2016 NR:ns ## KEGG: EF2016 # Name: not_defined # Def: portal protein # Organism: E.faecalis # Pathway: not_defined # 1 126 1 126 490 207 84.0 2e-52 MFQNSLTLKNYKRLRTKFSTQIADGLFNADEFIKDMKPFFDDRERKYKAYTSEKNEIDRR PKPATIIIKVNNKLHAGLYSTVVDQAADHFTGIPIKWDYDVTEQRRSIMQRAKDLFLNNT LKNTKT Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:26 2011 Seq name: gi|237663544|gb|GG668974.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD53, whole genome shotgun sequence Length of sequence - 409 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 407 339 ## EF2016 portal protein Predicted protein(s) >gi|237663544|gb|GG668974.1| GENE 1 2 - 407 339 135 aa, chain - ## HITS:1 COG:no KEGG:EF2016 NR:ns ## KEGG: EF2016 # Name: not_defined # Def: portal protein # Organism: E.faecalis # Pathway: not_defined # 1 135 346 480 490 259 100.0 3e-68 FYTITKSIDFNDEVFKSNASGEARKWQIIALEAKTNTKEQYFREGLKEVAETMAAFIKFN DKLDLDVSKIVFTFSRSLPTDIGYLADALPKLSPFLSKRTIINQIPFAKDPDYEMDLMNL EQGQDYPSGDYKLGG Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:29 2011 Seq name: gi|237663543|gb|GG668975.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD54, whole genome shotgun sequence Length of sequence - 391 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 341 177 ## COG3328 Transposase and inactivated derivatives Predicted protein(s) >gi|237663543|gb|GG668975.1| GENE 1 3 - 341 177 112 aa, chain + ## HITS:1 COG:MT3742 KEGG:ns NR:ns ## COG: MT3742 COG3328 # Protein_GI_number: 15843250 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis CDC1551 # 36 109 312 386 409 74 41.0 4e-14 KGIFKFTDINLAREAKNRLIHDYIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTN LIERLNQEVRRREKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:30 2011 Seq name: gi|237663542|gb|GG668976.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD55, whole genome shotgun sequence Length of sequence - 388 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 34 - 107 89.2 # Met CAT 0 0 - TRNA 128 - 201 77.6 # Met CAT 0 0 - TRNA 224 - 296 84.6 # Ala TGC 0 0 - TRNA 310 - 383 86.8 # Pro TGG 0 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:31 2011 Seq name: gi|237663541|gb|GG668977.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD56, whole genome shotgun sequence Length of sequence - 387 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 385 209 ## EF2003 tape measure protein, putative Predicted protein(s) >gi|237663541|gb|GG668977.1| GENE 1 1 - 385 209 128 aa, chain - ## HITS:1 COG:no KEGG:EF2003 NR:ns ## KEGG: EF2003 # Name: not_defined # Def: tape measure protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 128 317 437 974 147 63.0 1e-34 KELYDTLEPFAPVLAGLAGSIGTMMTINKVNSLVEDAVKGYKNWRAATEGVTTAQKILNT VMKANWIGIIVSAIVGLIVYIGYLWKTNENFREAVKNIWKNIQEFISSAADIVVKAWDST MEFFSNMW Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:34 2011 Seq name: gi|237663540|gb|GG668978.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD57, whole genome shotgun sequence Length of sequence - 384 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 384 402 ## EF0775 anchor protein, putative Predicted protein(s) >gi|237663540|gb|GG668978.1| GENE 1 3 - 384 402 127 aa, chain - ## HITS:1 COG:no KEGG:EF0775 NR:ns ## KEGG: EF0775 # Name: not_defined # Def: anchor protein, putative # Organism: E.faecalis # Pathway: not_defined # 2 127 638 763 962 178 88.0 6e-44 ADENGKDVTANGTVTQENNKVTFEMNKKDDSYSYLAGHTYTMTITTKIKDGATNEELAPY IEQGGIPNQADLNFGNEGDVLHSNKPTVTPPAPTPEDPTITKDIENQDHLDLTNREDSFD WHVKTAF Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:37 2011 Seq name: gi|237663539|gb|GG668979.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD58, whole genome shotgun sequence Length of sequence - 383 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 207 62 ## EF0487 hypothetical protein 2 1 Op 2 . - CDS 301 - 381 91 ## Predicted protein(s) >gi|237663539|gb|GG668979.1| GENE 1 3 - 207 62 68 aa, chain - ## HITS:1 COG:no KEGG:EF0487 NR:ns ## KEGG: EF0487 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 68 25 92 128 111 97.0 8e-24 MEFVDAWLDKETQKITLKRCFYDTSFKKQTLKELERVYFQLKEIINVQINKRSLNTNDIR NVRELEEK >gi|237663539|gb|GG668979.1| GENE 2 301 - 381 91 26 aa, chain - ## HITS:0 COG:no KEGG:no NR:no NVPVFFIKTPINRGVFEEIFGETLKA Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:44 2011 Seq name: gi|237663538|gb|GG668980.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD59, whole genome shotgun sequence Length of sequence - 367 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:44 2011 Seq name: gi|237663537|gb|GG668981.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD60, whole genome shotgun sequence Length of sequence - 366 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 366 247 ## EF2003 tape measure protein, putative Predicted protein(s) >gi|237663537|gb|GG668981.1| GENE 1 3 - 366 247 121 aa, chain + ## HITS:1 COG:no KEGG:EF2003 NR:ns ## KEGG: EF2003 # Name: not_defined # Def: tape measure protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 121 317 437 974 225 100.0 6e-58 KTLYDTLKPYAPLLAGLAGSIGTLMLAKKVSAAFTAWQKATEGLSIAQAILNSTMLANPF VAILAAVVGLVTGFIYLWKTNEGFRDAVKNIWKNIQEFISSAAETVVKAWDSTMKFFSNM W Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:47 2011 Seq name: gi|237663536|gb|GG668982.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD61, whole genome shotgun sequence Length of sequence - 364 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 363 264 ## EF0485 aggregation substance Predicted protein(s) >gi|237663536|gb|GG668982.1| GENE 1 3 - 363 264 120 aa, chain - ## HITS:1 COG:no KEGG:EF0485 NR:ns ## KEGG: EF0485 # Name: not_defined # Def: aggregation substance # Organism: E.faecalis # Pathway: not_defined # 1 120 452 571 1305 214 90.0 1e-54 GHAEFVSDFGANNAFKYINGSYVKKQADGKFYSPEDIDYGTGPSKLKNSDWDAVGHKNAY FGSGVGLANGRISFSFGMTTKGKSNVPVSSAQWFAFSTNLNAKSITPYQEKGRFKQPEKA Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:50 2011 Seq name: gi|237663535|gb|GG668983.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD62, whole genome shotgun sequence Length of sequence - 364 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 363 232 ## EF0485 aggregation substance Predicted protein(s) >gi|237663535|gb|GG668983.1| GENE 1 3 - 363 232 120 aa, chain - ## HITS:1 COG:no KEGG:EF0485 NR:ns ## KEGG: EF0485 # Name: not_defined # Def: aggregation substance # Organism: E.faecalis # Pathway: not_defined # 1 120 452 571 1305 239 100.0 2e-62 GHAEFVSDFGANNAFKYINGSYVKKQADGKFYSPEDIDYGTGPSGLKNSDWDAVGHKNAY FGSGVGLANGRISFSFGMTTKGKSNVPVSSAQWFAFSTNLNAQSVKPIFNYGNPKEPEKA Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:53 2011 Seq name: gi|237663534|gb|GG668984.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD63, whole genome shotgun sequence Length of sequence - 360 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:54 2011 Seq name: gi|237663533|gb|GG668985.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD64, whole genome shotgun sequence Length of sequence - 346 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 150 71 ## Predicted protein(s) >gi|237663533|gb|GG668985.1| GENE 1 1 - 150 71 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no VLGAWYKRLSPPAKFLTIFAQRGLKPPLSENGQEFCNYEKNTKRRGQTE Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:59 2011 Seq name: gi|237663532|gb|GG668986.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD65, whole genome shotgun sequence Length of sequence - 334 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:38:59 2011 Seq name: gi|237663531|gb|GG668987.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD66, whole genome shotgun sequence Length of sequence - 334 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 88 - 334 162 ## EF0505 hypothetical protein Predicted protein(s) >gi|237663531|gb|GG668987.1| GENE 1 88 - 334 162 82 aa, chain + ## HITS:1 COG:no KEGG:EF0505 NR:ns ## KEGG: EF0505 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 20 82 1 63 242 67 55.0 2e-10 MKPLLYNYYIDYTKKDKTRLIILCLLHELRVISVQQLIDFFQIERLSAESTVYKHLNLLK TDGLIARSKNGMHTFYYLTKEG Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:02 2011 Seq name: gi|237663530|gb|GG668988.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD67, whole genome shotgun sequence Length of sequence - 307 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:02 2011 Seq name: gi|237663529|gb|GG668989.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD68, whole genome shotgun sequence Length of sequence - 305 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 304 361 ## COG1440 Phosphotransferase system cellobiose-specific component IIB Predicted protein(s) >gi|237663529|gb|GG668989.1| GENE 1 1 - 304 361 101 aa, chain + ## HITS:1 COG:lin2831 KEGG:ns NR:ns ## COG: lin2831 COG1440 # Protein_GI_number: 16801891 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 5 101 2 96 101 117 69.0 6e-27 KMAKKTIMLVCSAGMSTSLLVTKMQKAAEDRGMEADIFAVSASEADTNLENKEVNVLLLG PQVRFMKGQFEQKLQPKGIPLDVINMADYGMMNGEKVLDQA Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:03 2011 Seq name: gi|237663528|gb|GG668990.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD69, whole genome shotgun sequence Length of sequence - 298 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 297 321 ## EF0775 anchor protein, putative Predicted protein(s) >gi|237663528|gb|GG668990.1| GENE 1 3 - 297 321 98 aa, chain - ## HITS:1 COG:no KEGG:EF0775 NR:ns ## KEGG: EF0775 # Name: not_defined # Def: anchor protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 98 666 763 962 155 96.0 3e-37 DSYTYLSGHTYTMTITTKIKADATDEELAPYIEQGGIPNQADLNFGNEGDVLHSNKPTVT PPAPTPEDPTITKDIEGQEHLDLTNRDQEFKWNVKTTF Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:06 2011 Seq name: gi|237663527|gb|GG668991.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD70, whole genome shotgun sequence Length of sequence - 294 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 85 - 294 252 ## EF2003 tape measure protein, putative Predicted protein(s) >gi|237663527|gb|GG668991.1| GENE 1 85 - 294 252 69 aa, chain - ## HITS:1 COG:no KEGG:EF2003 NR:ns ## KEGG: EF2003 # Name: not_defined # Def: tape measure protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 64 218 281 974 108 95.0 9e-23 AISVEEFQDALIKLNKEGGGGLKSLEQIAKDSTAGIKTGLANMKTAIVRGVANVVTKIDE GEKAQVLEV Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:08 2011 Seq name: gi|237663526|gb|GG668992.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD71, whole genome shotgun sequence Length of sequence - 289 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 272 89 ## EF2017 terminase, large subunit, putative Predicted protein(s) >gi|237663526|gb|GG668992.1| GENE 1 2 - 272 89 90 aa, chain - ## HITS:1 COG:no KEGG:EF2017 NR:ns ## KEGG: EF2017 # Name: not_defined # Def: terminase, large subunit, putative # Organism: E.faecalis # Pathway: not_defined # 2 90 26 114 463 161 89.0 9e-39 MASDFYKQDRVYLKELCNDLQEFIYDSEDNVLVINEPPRHGKSRTAGKFVEWLLGNDNQK KIMTGSYNETLSTTFSKSVRNTVQEIKADE Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:11 2011 Seq name: gi|237663525|gb|GG668993.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD72, whole genome shotgun sequence Length of sequence - 285 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:11 2011 Seq name: gi|237663524|gb|GG668994.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD73, whole genome shotgun sequence Length of sequence - 280 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 278 284 ## EF2037 antirepressor, putative Predicted protein(s) >gi|237663524|gb|GG668994.1| GENE 1 2 - 278 284 92 aa, chain + ## HITS:1 COG:no KEGG:EF2037 NR:ns ## KEGG: EF2037 # Name: not_defined # Def: antirepressor, putative # Organism: E.faecalis # Pathway: not_defined # 6 92 1 87 240 166 100.0 3e-40 DDTETMDNLVIMKNQQAVTTSLQVAETFNKNHRDVLAAIDDLKEGVAENYAGLFYEDSYI HPQNKQKYRQIIMNRDGFTLLAMGFTGQKALK Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:14 2011 Seq name: gi|237663523|gb|GG668995.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD74, whole genome shotgun sequence Length of sequence - 273 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 273 254 ## EF0355 endolysin, putative Predicted protein(s) >gi|237663523|gb|GG668995.1| GENE 1 3 - 273 254 90 aa, chain - ## HITS:1 COG:no KEGG:EF0355 NR:ns ## KEGG: EF0355 # Name: not_defined # Def: endolysin, putative # Organism: E.faecalis # Pathway: not_defined # 1 90 279 368 433 166 93.0 3e-40 DVDAWATGEAIPQWVKGNSYKVQEATESRVLLEGILSWISKGDIELLPDAVTVPDKQPES THVVQYGETLSSIAYQYGTDYQTLAALNGL Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:16 2011 Seq name: gi|237663522|gb|GG668996.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD75, whole genome shotgun sequence Length of sequence - 271 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 270 233 ## COG5410 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|237663522|gb|GG668996.1| GENE 1 3 - 270 233 89 aa, chain - ## HITS:1 COG:lin1732_1 KEGG:ns NR:ns ## COG: lin1732_1 COG5410 # Protein_GI_number: 16800800 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 2 89 156 240 310 68 43.0 4e-12 TATGFGADIIIIDDLIKNAEEANNAMVLEKHWEWFVNTMLSRLETGGKIIIIMTRWNSND LAGKALKELPQSGYKVKHISMKAYNEETD Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:17 2011 Seq name: gi|237663521|gb|GG668997.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD76, whole genome shotgun sequence Length of sequence - 266 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 180 255 ## EF0573 hypothetical protein Predicted protein(s) >gi|237663521|gb|GG668997.1| GENE 1 1 - 180 255 59 aa, chain + ## HITS:1 COG:no KEGG:EF0573 NR:ns ## KEGG: EF0573 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 53 135 187 536 92 96.0 4e-18 SLKVKAHYTNGLALEAGKEVRLRNLTDGSTEVLKKQVDANGEVVFTEQDGIEKGSKLWY Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:19 2011 Seq name: gi|237663520|gb|GG668998.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD77, whole genome shotgun sequence Length of sequence - 260 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 246 109 ## EF2017 terminase, large subunit, putative Predicted protein(s) >gi|237663520|gb|GG668998.1| GENE 1 3 - 246 109 81 aa, chain - ## HITS:1 COG:no KEGG:EF2017 NR:ns ## KEGG: EF2017 # Name: not_defined # Def: terminase, large subunit, putative # Organism: E.faecalis # Pathway: not_defined # 1 81 24 104 463 153 92.0 2e-36 MTASDFYKQDRVYLKELCDDLQEFIYDSDDNVLVINEPPRHGKSRTAGKFVEWLLGNDNQ KKIMTGSYNETLSTTFSKSVR Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:22 2011 Seq name: gi|237663519|gb|GG668999.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD78, whole genome shotgun sequence Length of sequence - 243 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 7 - 243 81 ## EF2038 hypothetical protein Predicted protein(s) >gi|237663519|gb|GG668999.1| GENE 1 7 - 243 81 78 aa, chain - ## HITS:1 COG:no KEGG:EF2038 NR:ns ## KEGG: EF2038 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 78 26 103 103 141 98.0 7e-33 EQVINEASQGLNERAEYLDIKQLSSRYSMSVPEVEQNFVKDKRMQMIEKRKPGTSKGKRY WPAKEAIKICNDIMNHWD Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:24 2011 Seq name: gi|237663518|gb|GG669000.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD79, whole genome shotgun sequence Length of sequence - 243 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 243 130 ## EF2037 antirepressor, putative Predicted protein(s) >gi|237663518|gb|GG669000.1| GENE 1 3 - 243 130 80 aa, chain - ## HITS:1 COG:no KEGG:EF2037 NR:ns ## KEGG: EF2037 # Name: not_defined # Def: antirepressor, putative # Organism: E.faecalis # Pathway: not_defined # 1 80 89 168 240 137 98.0 1e-31 ELKYIEAFNQMEELLKTQSNLPINNTELLLEAALKHERGLTLVNQRLDKLETETTINRSQ QRKIQGLVSSTVIKVLGGKK Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:27 2011 Seq name: gi|237663517|gb|GG669001.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD80, whole genome shotgun sequence Length of sequence - 240 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 41 - 129 53.0 # Ser GGA 0 0 + TRNA 147 - 218 70.2 # Glu TTC 0 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:27 2011 Seq name: gi|237663516|gb|GG669002.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD81, whole genome shotgun sequence Length of sequence - 237 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 204 289 ## gi|270299934|gb|ACZ68740.1| hypothetical protein SAP069A_050 Predicted protein(s) >gi|237663516|gb|GG669002.1| GENE 1 3 - 204 289 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|270299934|gb|ACZ68740.1| ## NR: gi|270299934|gb|ACZ68740.1| hypothetical protein SAP069A_050 [Staphylococcus aureus] hypothetical protein SAP016A_055 [Staphylococcus epidermidis] hypothetical protein SAP079A_050 [Staphylococcus aureus] hypothetical protein SAP082A_045 [Staphylococcus aureus] # 1 67 1 67 76 95 100.0 1e-18 MLTKNIKYPYVKFGFDVVGVLASIGIFLIFVFNTHANFGSDGSSSFGINVTGSSMVLLSS LILIVVI Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:33 2011 Seq name: gi|237663515|gb|GG669003.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD82, whole genome shotgun sequence Length of sequence - 236 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 216 306 ## EF2466 hypothetical protein Predicted protein(s) >gi|237663515|gb|GG669003.1| GENE 1 1 - 216 306 71 aa, chain + ## HITS:1 COG:no KEGG:EF2466 NR:ns ## KEGG: EF2466 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 71 627 697 1511 122 92.0 3e-27 KIVKQDKDSKKRLAGAEFQWKDTVTGKTGTVTVGTDGTVTIPNLSVNRTYELTETKAPAG YVLDKTVHKVT Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:35 2011 Seq name: gi|237663514|gb|GG669004.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD83, whole genome shotgun sequence Length of sequence - 233 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 82 - 231 106 ## EF0512 DNA-damage-inducible protein J, putative Predicted protein(s) >gi|237663514|gb|GG669004.1| GENE 1 82 - 231 106 49 aa, chain - ## HITS:1 COG:no KEGG:EF0512 NR:ns ## KEGG: EF0512 # Name: not_defined # Def: DNA-damage-inducible protein J, putative # Organism: E.faecalis # Pathway: not_defined # 1 49 40 88 88 82 97.0 4e-15 LKQSINEQAIPFMINKGNKETLQALKDIKEGNVHGGFSSVEDLMENLNA Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:37 2011 Seq name: gi|237663513|gb|GG669005.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD84, whole genome shotgun sequence Length of sequence - 232 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 231 281 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases Predicted protein(s) >gi|237663513|gb|GG669005.1| GENE 1 3 - 231 281 76 aa, chain + ## HITS:1 COG:mll2061 KEGG:ns NR:ns ## COG: mll2061 COG0402 # Protein_GI_number: 13471934 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Mesorhizobium loti # 3 76 188 261 415 70 50.0 6e-13 AKGADFIGGVDPYSLDGDYKKSLAETFRLADKHGVGVDIHLHDRHEAGTTTIKEIIRLTK EYGLQDKVFISHAFGL Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:38 2011 Seq name: gi|237663512|gb|GG669006.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD85, whole genome shotgun sequence Length of sequence - 230 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 230 217 ## EF2015 minor head protein, putative Predicted protein(s) >gi|237663512|gb|GG669006.1| GENE 1 2 - 230 217 76 aa, chain - ## HITS:1 COG:no KEGG:EF2015 NR:ns ## KEGG: EF2015 # Name: not_defined # Def: minor head protein, putative # Organism: E.faecalis # Pathway: not_defined # 2 76 13 87 634 131 100.0 8e-30 DWEKRRELEDKARLKLEKKTLSELESVFERALVKIQRQLLAQADLHGITQSEMLEDFSKR DQEKYRKYIEKNYEKL Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:40 2011 Seq name: gi|237663511|gb|GG669007.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD86, whole genome shotgun sequence Length of sequence - 229 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:41 2011 Seq name: gi|237663510|gb|GG669008.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD87, whole genome shotgun sequence Length of sequence - 226 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 224 163 ## CLI_2421 hypothetical protein Predicted protein(s) >gi|237663510|gb|GG669008.1| GENE 1 2 - 224 163 74 aa, chain + ## HITS:1 COG:no KEGG:CLI_2421 NR:ns ## KEGG: CLI_2421 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_F # Pathway: not_defined # 3 74 118 189 469 135 87.0 4e-31 RIVFSDVFPGVEIKSGDGAMNLWSLNGGYNNYLATSPTGTATGFGADIIIIDDLIKNAEE ANNAMVLEKHWDWF Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:43 2011 Seq name: gi|237663509|gb|GG669009.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD88, whole genome shotgun sequence Length of sequence - 223 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 221 140 ## EF3314 cell wall surface anchor family protein Predicted protein(s) >gi|237663509|gb|GG669009.1| GENE 1 2 - 221 140 73 aa, chain + ## HITS:1 COG:no KEGG:EF3314 NR:ns ## KEGG: EF3314 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: E.faecalis # Pathway: not_defined # 1 73 609 681 1744 75 95.0 7e-13 ANETLTAVAKNASGTESTPTTFQTPADETTVTAPTITGVTGNSTAGYEVKGTTDANATVE IRNAGGAVIGTGS Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:46 2011 Seq name: gi|237663508|gb|GG669010.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD89, whole genome shotgun sequence Length of sequence - 216 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 216 123 ## EF2016 portal protein Predicted protein(s) >gi|237663508|gb|GG669010.1| GENE 1 3 - 216 123 71 aa, chain - ## HITS:1 COG:no KEGG:EF2016 NR:ns ## KEGG: EF2016 # Name: not_defined # Def: portal protein # Organism: E.faecalis # Pathway: not_defined # 1 71 128 198 490 141 97.0 7e-33 EEFERLTELVNDMRFAMLDSDTARFQGACGVAFRLLEPVETKEGWQLWASNIEPWKAEKY ENADIFIREKY Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:48 2011 Seq name: gi|237663507|gb|GG669011.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD90, whole genome shotgun sequence Length of sequence - 208 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 206 128 ## EF2015 minor head protein, putative Predicted protein(s) >gi|237663507|gb|GG669011.1| GENE 1 2 - 206 128 68 aa, chain + ## HITS:1 COG:no KEGG:EF2015 NR:ns ## KEGG: EF2015 # Name: not_defined # Def: minor head protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 68 89 156 634 134 100.0 2e-30 ESDEVYKQFIDEYFPSFDYAKVNRLLQLRADIFSTIAGEAIASDVNGKFNNDLENITKRI YNSNSNAL Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:51 2011 Seq name: gi|237663506|gb|GG669012.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD91, whole genome shotgun sequence Length of sequence - 208 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 206 75 ## EF2015 minor head protein, putative Predicted protein(s) >gi|237663506|gb|GG669012.1| GENE 1 2 - 206 75 68 aa, chain + ## HITS:1 COG:no KEGG:EF2015 NR:ns ## KEGG: EF2015 # Name: not_defined # Def: minor head protein, putative # Organism: E.faecalis # Pathway: not_defined # 1 68 89 156 634 129 95.0 4e-29 ESDEAYKQFIDEYFPSYDYAKVNRLLQLRADIFSTLAGEAIASDVNGKFNNDLENITKRI YNSNSNAL Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:53 2011 Seq name: gi|237663505|gb|GG669013.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD92, whole genome shotgun sequence Length of sequence - 205 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 1 - 90 62.1 # Ser TGA 0 0 + TRNA 124 - 197 74.1 # Met CAT 0 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:54 2011 Seq name: gi|237663504|gb|GG669014.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD93, whole genome shotgun sequence Length of sequence - 205 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 14 - 86 75.8 # Phe GAA 0 0 - TRNA 92 - 165 80.1 # Asp GTC 0 0 Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:54 2011 Seq name: gi|237663503|gb|GG669015.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD94, whole genome shotgun sequence Length of sequence - 205 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 184 153 ## EF_B0063 replication control protein PrgN Predicted protein(s) >gi|237663503|gb|GG669015.1| GENE 1 1 - 184 153 61 aa, chain - ## HITS:1 COG:no KEGG:EF_B0063 NR:ns ## KEGG: EF_B0063 # Name: prgN # Def: replication control protein PrgN # Organism: E.faecalis # Pathway: not_defined # 1 61 1 61 98 121 98.0 8e-27 MPRKTFVYPHPINAYIIKHLGITVEEFCELHAFSQGTVSSWITRNKKIETLPISFIYSLS L Prediction of potential genes in microbial genomes Time: Tue Jul 5 13:39:56 2011 Seq name: gi|237663502|gb|GG669016.1| Enterococcus faecalis TX0104 genomic scaffold SCAFFOLD95, whole genome shotgun sequence Length of sequence - 203 bp Number of predicted genes - 0