Prediction of potential genes in microbial genomes Time: Sun May 15 14:52:46 2011 Seq name: gi|299856450|gb|ADWV01000001.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont0.1, whole genome shotgun sequence Length of sequence - 505894 bp Number of predicted genes - 485, with homology - 482 Number of transcription units - 249, operones - 109 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) - SSU_RRNA 1 - 466 97.0 # CP000800 [D:4263705..4265246] # 16S ribosomal RNA # Escherichia coli E24377A # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. + Prom 755 - 814 7.7 1 1 Op 1 5/0.238 + CDS 946 - 1638 575 ## COG2186 Transcriptional regulators 2 1 Op 2 . + CDS 1661 - 3088 926 ## COG0477 Permeases of the major facilitator superfamily 3 2 Op 1 13/0.000 - CDS 3054 - 4037 886 ## COG1609 Transcriptional regulators 4 2 Op 2 8/0.012 - CDS 4050 - 4994 813 ## COG0524 Sugar kinases, ribokinase family 5 3 Op 1 16/0.000 - CDS 5105 - 5995 1101 ## COG1879 ABC-type sugar transport system, periplasmic component 6 3 Op 2 21/0.000 - CDS 6020 - 6985 1323 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 7 3 Op 3 9/0.012 - CDS 6990 - 8495 1772 ## COG1129 ABC-type sugar transport system, ATPase component 8 3 Op 4 4/0.429 - CDS 8503 - 8922 377 ## COG1869 ABC-type ribose transport system, auxiliary component - Prom 9017 - 9076 4.1 - Term 9043 - 9083 5.6 9 4 Tu 1 . - CDS 9089 - 10957 1676 ## COG3158 K+ transporter - Prom 11099 - 11158 4.5 + Prom 11084 - 11143 2.8 10 5 Op 1 7/0.048 + CDS 11180 - 12676 1425 ## COG0714 MoxR-like ATPases 11 5 Op 2 . + CDS 12670 - 14121 1184 ## COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 12 6 Tu 1 . - CDS 14126 - 15118 1174 ## COG2502 Asparagine synthetase A - Prom 15188 - 15247 5.0 + Prom 15184 - 15243 7.0 13 7 Op 1 4/0.429 + CDS 15270 - 15728 510 ## COG1522 Transcriptional regulators + Prom 15737 - 15796 2.0 14 7 Op 2 5/0.238 + CDS 15818 - 16261 585 ## COG0716 Flavodoxins + Prom 16488 - 16547 4.7 15 8 Op 1 24/0.000 + CDS 16640 - 18529 2015 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 16 8 Op 2 3/0.679 + CDS 18593 - 19216 548 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division + Term 19304 - 19355 4.2 + Prom 19689 - 19748 5.8 17 9 Op 1 8/0.012 + CDS 19833 - 20213 210 ## COG3312 F0F1-type ATP synthase, subunit I 18 9 Op 2 40/0.000 + CDS 20222 - 21037 768 ## COG0356 F0F1-type ATP synthase, subunit a 19 9 Op 3 37/0.000 + CDS 21084 - 21323 376 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 20 9 Op 4 38/0.000 + CDS 21385 - 21855 593 ## COG0711 F0F1-type ATP synthase, subunit b 21 9 Op 5 41/0.000 + CDS 21870 - 22403 536 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 22 9 Op 6 42/0.000 + CDS 22416 - 23957 1853 ## COG0056 F0F1-type ATP synthase, alpha subunit 23 9 Op 7 42/0.000 + CDS 24008 - 24871 993 ## COG0224 F0F1-type ATP synthase, gamma subunit 24 9 Op 8 42/0.000 + CDS 24898 - 26280 1701 ## COG0055 F0F1-type ATP synthase, beta subunit 25 9 Op 9 6/0.119 + CDS 26301 - 26720 463 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 26743 - 26776 4.5 26 10 Tu 1 9/0.012 + CDS 27071 - 28441 1717 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 27 11 Tu 1 1/0.893 + CDS 28603 - 30432 2354 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 30453 - 30484 2.3 + Prom 30474 - 30533 8.6 28 12 Tu 1 . + CDS 30734 - 31306 496 ## COG3539 P pilus assembly protein, pilin FimA + Prom 31375 - 31434 5.9 29 13 Tu 1 . + CDS 31570 - 32550 438 ## COG3039 Transposase and inactivated derivatives, IS5 family + Term 32756 - 32790 -0.7 30 14 Op 1 10/0.000 + CDS 32892 - 33284 219 ## COG3121 P pilus assembly protein, chaperone PapD 31 14 Op 2 . + CDS 33309 - 34925 1081 ## COG3188 P pilus assembly protein, porin PapC 32 14 Op 3 6/0.119 + CDS 34998 - 35831 456 ## COG3188 P pilus assembly protein, porin PapC 33 14 Op 4 2/0.810 + CDS 35842 - 36915 315 ## COG3539 P pilus assembly protein, pilin FimA + Prom 37025 - 37084 9.1 34 15 Op 1 39/0.000 + CDS 37163 - 38203 1195 ## COG0226 ABC-type phosphate transport system, periplasmic component 35 15 Op 2 38/0.000 + CDS 38290 - 39249 1265 ## COG0573 ABC-type phosphate transport system, permease component 36 15 Op 3 41/0.000 + CDS 39249 - 40139 1178 ## COG0581 ABC-type phosphate transport system, permease component 37 15 Op 4 32/0.000 + CDS 40230 - 41003 345 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 38 15 Op 5 1/0.893 + CDS 41018 - 41743 885 ## COG0704 Phosphate uptake regulator + Term 41753 - 41795 9.0 + Prom 41760 - 41819 6.8 39 16 Tu 1 . + CDS 42029 - 42865 606 ## COG3711 Transcriptional antiterminator + Term 42913 - 42968 12.3 + Prom 42900 - 42959 3.8 40 17 Op 1 8/0.012 + CDS 42998 - 44875 1360 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 41 17 Op 2 1/0.893 + CDS 44894 - 46288 1235 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 46309 - 46353 5.7 42 18 Op 1 . + CDS 46374 - 47990 1543 ## COG4580 Maltoporin (phage lambda and maltose receptor) 43 18 Op 2 . + CDS 48017 - 49186 1117 ## COG2382 Enterochelin esterase and related enzymes 44 18 Op 3 . + CDS 49201 - 49923 786 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 49937 - 49978 5.2 - Term 49783 - 49820 -0.9 45 19 Op 1 . - CDS 49985 - 50572 260 ## COG3196 Uncharacterized protein conserved in bacteria 46 19 Op 2 . - CDS 50621 - 51094 287 ## SSON_3560 putative inner membrane protein 47 19 Op 3 . - CDS 51161 - 51826 677 ## COG0637 Predicted phosphatase/phosphohexomutase - Prom 51958 - 52017 1.8 + Prom 51903 - 51962 1.6 48 20 Tu 1 . + CDS 51993 - 53330 1611 ## COG2252 Permeases + Term 53351 - 53387 5.3 - Term 53339 - 53375 5.3 49 21 Op 1 3/0.679 - CDS 53384 - 53950 803 ## COG0431 Predicted flavoprotein 50 21 Op 2 4/0.429 - CDS 53972 - 54733 486 ## COG2091 Phosphopantetheinyl transferase - Prom 54815 - 54874 6.7 51 22 Op 1 9/0.012 - CDS 54878 - 55837 766 ## COG0583 Transcriptional regulator 52 22 Op 2 3/0.679 - CDS 55812 - 56987 820 ## COG0477 Permeases of the major facilitator superfamily - Prom 57014 - 57073 2.5 - Term 57078 - 57106 0.6 53 23 Op 1 3/0.679 - CDS 57119 - 58366 1018 ## COG0814 Amino acid permeases - Term 58407 - 58445 3.7 54 23 Op 2 . - CDS 58457 - 59872 1937 ## COG3033 Tryptophanase - Prom 59907 - 59966 6.7 - Term 60354 - 60400 11.7 55 24 Op 1 10/0.000 - CDS 60410 - 61774 1536 ## COG0486 Predicted GTPase - Term 61824 - 61854 3.0 56 24 Op 2 22/0.000 - CDS 61880 - 63526 1897 ## COG0706 Preprotein translocase subunit YidC - Prom 63590 - 63649 3.9 57 24 Op 3 . - CDS 63750 - 64076 242 ## COG0594 RNase P protein component 58 24 Op 4 . - CDS 64126 - 64266 228 ## PROTEIN SUPPORTED gi|15804297|ref|NP_290336.1| 50S ribosomal protein L34 - Prom 64362 - 64421 6.3 59 25 Op 1 16/0.000 + CDS 64873 - 66276 1366 ## COG0593 ATPase involved in DNA replication initiation 60 25 Op 2 18/0.000 + CDS 66281 - 67381 1278 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 61 25 Op 3 9/0.012 + CDS 67381 - 68454 825 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 62 25 Op 4 1/0.893 + CDS 68483 - 70897 3114 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 71029 - 71071 11.9 + Prom 71031 - 71090 6.6 63 26 Tu 1 . + CDS 71137 - 71535 555 ## COG3753 Uncharacterized protein conserved in bacteria + Term 71542 - 71583 5.1 + Prom 71540 - 71599 3.8 64 27 Tu 1 . + CDS 71650 - 72462 1167 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 72471 - 72512 6.4 - Term 72451 - 72507 6.3 65 28 Tu 1 . - CDS 72508 - 73164 290 ## EcE24377A_4205 hypothetical protein - Prom 73307 - 73366 4.9 + Prom 73251 - 73310 8.7 66 29 Op 1 1/0.893 + CDS 73442 - 74131 650 ## COG2186 Transcriptional regulators 67 29 Op 2 2/0.810 + CDS 74128 - 75006 530 ## COG3734 2-keto-3-deoxy-galactonokinase 68 29 Op 3 1/0.893 + CDS 74990 - 75607 558 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 69 29 Op 4 7/0.048 + CDS 75604 - 76752 1612 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 70 30 Tu 1 . + CDS 76872 - 78164 1412 ## COG0477 Permeases of the major facilitator superfamily + Term 78175 - 78221 5.6 71 31 Tu 1 . - CDS 78161 - 79225 628 ## COG0644 Dehydrogenases (flavoproteins) - Prom 79280 - 79339 1.6 + Prom 79242 - 79301 4.6 72 32 Tu 1 . + CDS 79326 - 80540 1023 ## ECSE_3975 hypothetical protein 73 33 Tu 1 . - CDS 80542 - 80805 291 ## COG5645 Predicted periplasmic lipoprotein - Prom 80993 - 81052 3.0 74 34 Tu 1 4/0.429 + CDS 81180 - 81593 586 ## COG0071 Molecular chaperone (small heat shock protein) 75 35 Tu 1 1/0.893 + CDS 81705 - 82133 549 ## COG0071 Molecular chaperone (small heat shock protein) + Term 82149 - 82181 5.4 + Prom 82153 - 82212 3.9 76 36 Tu 1 . + CDS 82330 - 83991 1945 ## COG2985 Predicted permease + Term 83999 - 84045 11.3 77 37 Tu 1 . - CDS 83988 - 84704 628 ## COG2188 Transcriptional regulators + Prom 84740 - 84799 3.8 78 38 Op 1 2/0.810 + CDS 85000 - 86616 1774 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 79 38 Op 2 . + CDS 86616 - 87254 562 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 80 38 Op 3 . + CDS 87218 - 87430 231 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases + Term 87433 - 87479 10.0 81 39 Tu 1 . - CDS 87427 - 88320 601 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 88350 - 88409 2.6 + Prom 88276 - 88335 5.0 82 40 Op 1 4/0.429 + CDS 88481 - 90196 1721 ## COG4146 Predicted symporter 83 40 Op 2 . + CDS 90193 - 91686 1127 ## COG3119 Arylsulfatase A and related enzymes + Term 91693 - 91731 4.2 - Term 91681 - 91719 1.2 84 41 Tu 1 . - CDS 91733 - 92143 360 ## EC55989_4146 conserved hypothetical protein; putative inner membrane protein - Prom 92249 - 92308 7.1 + Prom 92124 - 92183 3.6 85 42 Op 1 . + CDS 92292 - 92639 484 ## COG2149 Predicted membrane protein 86 42 Op 2 . + CDS 92629 - 92991 261 ## ECO111_4500 putative inner membrane protein 87 42 Op 3 . + CDS 92988 - 93485 391 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) - Term 93431 - 93480 2.0 88 43 Tu 1 . - CDS 93493 - 94644 1257 ## COG0477 Permeases of the major facilitator superfamily - Prom 94699 - 94758 5.3 - Term 95039 - 95073 7.0 89 44 Tu 1 . - CDS 95096 - 95185 125 ## - Prom 95401 - 95460 5.0 90 45 Op 1 32/0.000 + CDS 95953 - 97641 1937 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 91 45 Op 2 1/0.893 + CDS 97645 - 97935 370 ## COG0440 Acetolactate synthase, small (regulatory) subunit + Term 97958 - 97996 6.0 92 46 Tu 1 5/0.238 + CDS 98010 - 98600 814 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Prom 98614 - 98673 1.7 93 47 Op 1 5/0.238 + CDS 98711 - 100102 1323 ## COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific 94 47 Op 2 3/0.679 + CDS 100112 - 101431 1318 ## COG2271 Sugar phosphate permease + Prom 101483 - 101542 2.3 95 48 Tu 1 . + CDS 101569 - 102960 1784 ## COG2271 Sugar phosphate permease + Term 102979 - 103009 3.3 96 49 Tu 1 . - CDS 103005 - 104771 1535 ## COG1001 Adenine deaminase - Prom 104821 - 104880 6.1 + Prom 104756 - 104815 5.8 97 50 Op 1 . + CDS 104934 - 106280 1280 ## COG2252 Permeases 98 50 Op 2 . + CDS 106333 - 106785 405 ## APECO1_2789 hypothetical protein + Prom 106905 - 106964 3.7 99 51 Tu 1 . + CDS 106996 - 108186 1140 ## COG2814 Arabinose efflux permease 100 52 Tu 1 . - CDS 108227 - 108520 273 ## SSON_3614 putative transport protein - Prom 108652 - 108711 4.4 + Prom 108659 - 108718 5.8 101 53 Tu 1 . + CDS 108742 - 109560 716 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Term 109440 - 109496 5.2 102 54 Op 1 8/0.012 - CDS 109564 - 110487 657 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 110522 - 110581 2.3 103 54 Op 2 . - CDS 110598 - 111782 617 ## COG0477 Permeases of the major facilitator superfamily - Prom 111965 - 112024 9.8 - TRNA 112423 - 112513 75.2 # SeC(p) TCA 0 0 + Prom 112606 - 112665 8.2 104 55 Op 1 3/0.679 + CDS 112806 - 114188 1221 ## COG2211 Na+/melibiose symporter and related transporters 105 55 Op 2 . + CDS 114198 - 116516 2137 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases + Term 116530 - 116573 6.4 - Term 116331 - 116370 -0.9 106 56 Tu 1 . - CDS 116569 - 118278 1404 ## ECO103_4502 hypothetical protein - Prom 118304 - 118363 1.8 107 57 Tu 1 . - CDS 118399 - 119790 1749 ## COG2233 Xanthine/uracil permeases - Prom 119814 - 119873 4.8 + Prom 119879 - 119938 7.0 108 58 Op 1 . + CDS 120070 - 121275 1440 ## COG0786 Na+/glutamate symporter 109 58 Op 2 . + CDS 121278 - 122144 659 ## EcE24377A_4155 hypothetical protein 110 59 Op 1 4/0.429 - CDS 122129 - 124210 2158 ## COG1200 RecG-like helicase 111 59 Op 2 5/0.238 - CDS 124216 - 124905 596 ## COG0566 rRNA methylases 112 59 Op 3 18/0.000 - CDS 124912 - 127020 2096 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 113 59 Op 4 25/0.000 - CDS 127039 - 127314 506 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 114 59 Op 5 . - CDS 127369 - 127992 564 ## COG0194 Guanylate kinase - Prom 128033 - 128092 4.6 + Prom 127993 - 128052 2.0 115 60 Op 1 . + CDS 128132 - 128389 78 ## ECH74115_5019 hypothetical protein 116 60 Op 2 . + CDS 128250 - 129932 964 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) - Term 129872 - 129909 5.3 117 61 Tu 1 . - CDS 129929 - 130546 895 ## COG2860 Predicted membrane protein - Prom 130713 - 130772 4.9 118 62 Tu 1 . - CDS 130838 - 131662 588 ## ECSE_3926 DNA-damage-inducible protein D - Prom 131722 - 131781 3.9 119 63 Tu 1 . - CDS 131883 - 132746 1187 ## COG1561 Uncharacterized stress-induced protein - Prom 132774 - 132833 5.5 + Prom 132784 - 132843 4.8 120 64 Op 1 6/0.119 + CDS 132873 - 133589 868 ## COG0689 RNase PH + Term 133597 - 133626 2.1 121 64 Op 2 . + CDS 133655 - 134296 852 ## COG0461 Orotate phosphoribosyltransferase + Term 134304 - 134341 7.8 - Term 134292 - 134327 7.4 122 65 Tu 1 . - CDS 134333 - 134929 664 ## COG1309 Transcriptional regulator - Term 134930 - 134965 -0.5 123 66 Op 1 5/0.238 - CDS 135036 - 135494 593 ## COG0756 dUTPase 124 66 Op 2 . - CDS 135472 - 136692 1104 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase - Prom 136723 - 136782 2.2 + Prom 136609 - 136668 2.4 125 67 Tu 1 . + CDS 136864 - 137532 439 ## COG2003 DNA repair proteins + Prom 137550 - 137609 3.4 126 68 Op 1 16/0.000 + CDS 137749 - 137985 403 ## PROTEIN SUPPORTED gi|15804178|ref|NP_290217.1| 50S ribosomal protein L28 127 68 Op 2 5/0.238 + CDS 138006 - 138173 280 ## PROTEIN SUPPORTED gi|15804177|ref|NP_290216.1| 50S ribosomal protein L33 + Term 138191 - 138232 9.7 + Prom 138189 - 138248 2.2 128 69 Tu 1 . + CDS 138271 - 139080 797 ## COG0266 Formamidopyrimidine-DNA glycosylase - Term 139069 - 139118 4.2 129 70 Op 1 6/0.119 - CDS 139119 - 139598 393 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 130 70 Op 2 . - CDS 139606 - 140883 1115 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase - Prom 140966 - 141025 6.4 131 71 Op 1 5/0.238 + CDS 141332 - 142354 566 ## COG0859 ADP-heptose:LPS heptosyltransferase 132 71 Op 2 . + CDS 142351 - 143475 793 ## COG0438 Glycosyltransferase 133 71 Op 3 . + CDS 143468 - 144265 550 ## ECO103_4552 lipopolysaccharide core biosynthesis protein FfaP 134 71 Op 4 . + CDS 144308 - 145315 230 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 135 71 Op 5 . + CDS 145341 - 146048 301 ## S4103 lipopolysaccharide core biosynthesis protein 136 71 Op 6 4/0.429 + CDS 146073 - 147086 174 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases + Term 147092 - 147137 -0.7 + Prom 147252 - 147311 3.9 137 72 Tu 1 . + CDS 147476 - 148237 206 ## COG0438 Glycosyltransferase - Term 148227 - 148268 7.7 138 73 Tu 1 . - CDS 148273 - 148974 179 ## COG3307 Lipid A core - O-antigen ligase and related enzymes - Prom 149008 - 149067 2.9 139 74 Op 1 11/0.000 - CDS 149478 - 150470 719 ## COG0859 ADP-heptose:LPS heptosyltransferase 140 74 Op 2 6/0.119 - CDS 150474 - 151520 956 ## COG0859 ADP-heptose:LPS heptosyltransferase 141 74 Op 3 . - CDS 151530 - 152462 1100 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 152697 - 152756 4.8 + Prom 152683 - 152742 12.7 142 75 Op 1 . + CDS 152766 - 153341 175 ## G2583_4357 involved in lipopolysaccharide biosynthesis 143 75 Op 2 . + CDS 153338 - 153622 167 ## JW5644 hypothetical protein + Term 153663 - 153711 9.1 + Prom 153667 - 153726 6.1 144 76 Op 1 9/0.012 + CDS 153897 - 155093 1648 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 145 76 Op 2 5/0.238 + CDS 155103 - 156128 1048 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 156138 - 156168 3.0 + Prom 156138 - 156197 6.2 146 77 Tu 1 . + CDS 156370 - 157401 492 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Term 157345 - 157386 -0.5 147 78 Op 1 3/0.679 - CDS 157388 - 158347 768 ## COG2861 Uncharacterized protein conserved in bacteria 148 78 Op 2 4/0.429 - CDS 158351 - 159610 1409 ## COG4942 Membrane-bound metallopeptidase 149 78 Op 3 . - CDS 159644 - 161188 1752 ## COG0696 Phosphoglyceromutase - Prom 161219 - 161278 4.2 + Prom 161334 - 161393 5.1 150 79 Tu 1 . + CDS 161433 - 161864 422 ## COG0607 Rhodanese-related sulfurtransferase + Prom 161875 - 161934 2.4 151 80 Op 1 9/0.012 + CDS 162005 - 162256 323 ## COG0695 Glutaredoxin and related proteins 152 80 Op 2 7/0.048 + CDS 162319 - 162786 501 ## COG1952 Preprotein translocase subunit SecB 153 80 Op 3 6/0.119 + CDS 162786 - 163805 1010 ## COG0240 Glycerol-3-phosphate dehydrogenase + Term 163831 - 163872 6.7 154 81 Op 1 . + CDS 163885 - 164397 543 ## COG1045 Serine acetyltransferase 155 81 Op 2 . + CDS 164378 - 164707 314 ## COG1045 Serine acetyltransferase 156 82 Tu 1 . - CDS 164760 - 165233 426 ## COG0219 Predicted rRNA methylase (SpoU class) 157 83 Op 1 5/0.238 - CDS 165419 - 166609 1477 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 158 83 Op 2 4/0.429 - CDS 166606 - 167382 681 ## COG2186 Transcriptional regulators 159 83 Op 3 3/0.679 - CDS 167382 - 169037 1881 ## COG1620 L-lactate permease - Term 169272 - 169309 7.1 160 84 Op 1 . - CDS 169406 - 174256 4005 ## COG5295 Autotransporter adhesin 161 84 Op 2 . - CDS 174300 - 174983 251 ## ECO26_4996 hypothetical protein - Prom 175171 - 175230 9.8 162 85 Tu 1 . - CDS 175527 - 175889 536 ## ECSP_4596 hypothetical protein - Prom 176005 - 176064 5.2 + Prom 175944 - 176003 3.9 163 86 Tu 1 . + CDS 176174 - 176383 222 ## JW3576 hypothetical protein 164 87 Op 1 7/0.048 - CDS 176395 - 176982 401 ## COG3722 Transcriptional regulator 165 87 Op 2 11/0.000 - CDS 176982 - 178130 1548 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 166 87 Op 3 . - CDS 178225 - 180138 2545 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component + Prom 180375 - 180434 5.2 167 88 Op 1 . + CDS 180675 - 181037 335 ## EcSMS35_3931 hypothetical protein 168 88 Op 2 . + CDS 181040 - 182176 1045 ## COG1566 Multidrug resistance efflux pump + Term 182210 - 182244 -0.8 169 89 Tu 1 . - CDS 182636 - 183073 99 ## ECSE_3874 hypothetical protein - Prom 183193 - 183252 5.6 170 90 Op 1 . - CDS 183780 - 184241 65 ## EC55989_4059 hypothetical protein 171 90 Op 2 . - CDS 184253 - 188482 2680 ## COG3209 Rhs family protein - Prom 188598 - 188657 6.1 + Prom 188629 - 188688 2.9 172 91 Op 1 4/0.429 + CDS 188711 - 189319 700 ## COG0625 Glutathione S-transferase 173 91 Op 2 7/0.048 + CDS 189417 - 190808 1423 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 174 91 Op 3 2/0.810 + CDS 190805 - 192649 1893 ## COG3276 Selenocysteine-specific translation elongation factor + Term 192700 - 192759 13.1 + Prom 192709 - 192768 9.0 175 92 Tu 1 6/0.119 + CDS 192839 - 193990 1375 ## COG1454 Alcohol dehydrogenase, class IV + Term 194006 - 194040 5.1 + Prom 194011 - 194070 2.3 176 93 Tu 1 . + CDS 194155 - 195693 1815 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 195702 - 195756 -0.3 - Term 195804 - 195855 -0.6 177 94 Tu 1 . - CDS 195912 - 196124 131 ## ECIAI1_3755 conserved hypothetical protein, putative membrane protein - Prom 196147 - 196206 5.8 + Prom 196146 - 196205 8.8 178 95 Op 1 . + CDS 196238 - 196561 359 ## B21_03393 hypothetical protein 179 95 Op 2 . + CDS 196567 - 197703 1048 ## COG1566 Multidrug resistance efflux pump + Term 197753 - 197787 -0.7 180 96 Tu 1 . - CDS 197700 - 198674 621 ## COG0583 Transcriptional regulator - Prom 198697 - 198756 10.4 + Prom 198646 - 198705 8.9 181 97 Tu 1 . + CDS 198798 - 199538 725 ## COG3713 Outer membrane protein V 182 98 Op 1 8/0.012 - CDS 199885 - 200580 574 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 183 98 Op 2 9/0.012 - CDS 200574 - 201434 905 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 184 98 Op 3 3/0.679 - CDS 201427 - 202089 864 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 185 98 Op 4 3/0.679 - CDS 202086 - 203582 1463 ## COG1070 Sugar (pentulose and hexulose) kinases 186 98 Op 5 9/0.012 - CDS 203586 - 204572 388 ## PROTEIN SUPPORTED gi|126646731|ref|ZP_01719241.1| Ribosomal protein L22 187 98 Op 6 11/0.000 - CDS 204585 - 205865 754 ## PROTEIN SUPPORTED gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 188 98 Op 7 2/0.810 - CDS 205865 - 206338 332 ## COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - Prom 206381 - 206440 1.5 - Term 206408 - 206446 -0.7 189 99 Op 1 3/0.679 - CDS 206456 - 206923 490 ## COG2731 Beta-galactosidase, beta subunit 190 99 Op 2 . - CDS 206935 - 207933 1088 ## COG2055 Malate/L-lactate dehydrogenases - Prom 207994 - 208053 4.5 + Prom 207924 - 207983 6.0 191 100 Op 1 . + CDS 208134 - 208982 716 ## COG1414 Transcriptional regulator 192 100 Op 2 . + CDS 209084 - 209557 205 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 + Term 209560 - 209606 7.6 193 101 Tu 1 . - CDS 209709 - 210962 1357 ## COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase - Prom 210993 - 211052 2.4 194 102 Tu 1 . - CDS 211140 - 213170 1585 ## COG0366 Glycosidases - Prom 213411 - 213470 5.6 195 103 Tu 1 . + CDS 213742 - 214314 494 ## COG2992 Uncharacterized FlgJ-related protein + Term 214329 - 214370 7.2 196 104 Tu 1 4/0.429 - CDS 214422 - 215600 1007 ## COG1609 Transcriptional regulators - Term 215616 - 215661 8.0 197 105 Op 1 11/0.000 - CDS 215678 - 216859 1026 ## COG4214 ABC-type xylose transport system, permease component 198 105 Op 2 11/0.000 - CDS 216837 - 218378 231 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Term 218412 - 218452 5.1 199 105 Op 3 . - CDS 218456 - 219448 960 ## COG4213 ABC-type xylose transport system, periplasmic component - Prom 219667 - 219726 6.9 + Prom 219658 - 219717 4.7 200 106 Op 1 11/0.000 + CDS 219814 - 221136 1386 ## COG2115 Xylose isomerase + Term 221138 - 221175 -0.3 201 106 Op 2 3/0.679 + CDS 221208 - 222662 945 ## COG1070 Sugar (pentulose and hexulose) kinases + Term 222665 - 222713 1.1 + Prom 222695 - 222754 5.8 202 107 Op 1 1/0.893 + CDS 222831 - 223172 321 ## COG4682 Predicted membrane protein 203 107 Op 2 . + CDS 223218 - 223655 509 ## COG4682 Predicted membrane protein 204 108 Tu 1 . - CDS 223697 - 224692 732 ## COG3274 Uncharacterized protein conserved in bacteria - Prom 224824 - 224883 3.8 + Prom 224757 - 224816 4.5 205 109 Op 1 . + CDS 224870 - 225166 256 ## ECO103_4674 putative outer membrane lipoprotein + Prom 225170 - 225229 3.4 206 109 Op 2 19/0.000 + CDS 225261 - 226172 1204 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 207 109 Op 3 . + CDS 226182 - 228251 2983 ## COG0751 Glycyl-tRNA synthetase, beta subunit + Term 228264 - 228307 4.9 - Term 228471 - 228506 -0.7 208 110 Tu 1 . - CDS 228531 - 228896 210 ## COG2801 Transposase and inactivated derivatives + Prom 228712 - 228771 3.7 209 111 Tu 1 . + CDS 228837 - 229292 124 ## gi|10955443|ref|NP_065295.1| hypothetical protein R721_05 210 112 Tu 1 . - CDS 229379 - 229900 206 ## COG2963 Transposase and inactivated derivatives + Prom 229837 - 229896 3.1 211 113 Tu 1 . + CDS 229963 - 230175 122 ## ECSE_3831 small toxic polypeptide + Term 230184 - 230215 4.1 - Term 230301 - 230336 4.9 212 114 Tu 1 4/0.429 - CDS 230363 - 230575 301 ## COG1278 Cold shock proteins - Prom 230736 - 230795 5.2 - Term 230798 - 230829 4.1 213 115 Tu 1 . - CDS 230856 - 231146 254 ## COG2944 Predicted transcriptional regulator + Prom 231363 - 231422 5.0 214 116 Tu 1 . + CDS 231580 - 232290 754 ## SBO_3556 hypothetical protein + Term 232300 - 232330 0.2 - Term 232282 - 232323 3.0 215 117 Tu 1 . - CDS 232340 - 233314 863 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 233337 - 233396 3.3 - Term 233369 - 233408 7.6 216 118 Tu 1 . - CDS 233418 - 234077 213 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 - Prom 234145 - 234204 2.4 + Prom 234053 - 234112 5.7 217 119 Tu 1 . + CDS 234230 - 236563 1962 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Term 236434 - 236469 6.1 218 120 Op 1 5/0.238 - CDS 236532 - 236972 491 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 219 120 Op 2 . - CDS 236969 - 237532 356 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) - Prom 237686 - 237745 6.5 + Prom 237554 - 237613 3.1 220 121 Tu 1 . + CDS 237690 - 238388 542 ## COG5571 Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion + Prom 238520 - 238579 3.5 221 122 Tu 1 . + CDS 238617 - 239819 1599 ## COG0477 Permeases of the major facilitator superfamily + Term 239851 - 239882 3.4 + Prom 240032 - 240091 9.8 222 123 Op 1 7/0.048 + CDS 240143 - 240667 532 ## COG3539 P pilus assembly protein, pilin FimA + Term 240697 - 240731 2.1 223 123 Op 2 10/0.000 + CDS 240751 - 241437 499 ## COG3121 P pilus assembly protein, chaperone PapD 224 123 Op 3 6/0.119 + CDS 241461 - 243992 2335 ## COG3188 P pilus assembly protein, porin PapC 225 123 Op 4 4/0.429 + CDS 244003 - 245058 555 ## COG3539 P pilus assembly protein, pilin FimA 226 123 Op 5 1/0.893 + CDS 245064 - 245588 426 ## COG3539 P pilus assembly protein, pilin FimA + Term 245602 - 245632 3.0 + Prom 245608 - 245667 7.4 227 124 Tu 1 . + CDS 245841 - 247532 1660 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase + Term 247587 - 247633 6.6 + TRNA 247624 - 247700 85.1 # Pro CGG 0 0 + Prom 248388 - 248447 3.2 228 125 Op 1 38/0.000 + CDS 248613 - 250220 2195 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 250284 - 250319 -0.1 + Prom 250292 - 250351 1.9 229 125 Op 2 49/0.000 + CDS 250371 - 251390 355 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 230 125 Op 3 44/0.000 + CDS 251400 - 252302 1333 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 231 125 Op 4 44/0.000 + CDS 252313 - 253296 576 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 232 125 Op 5 . + CDS 253293 - 254297 798 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 254307 - 254337 2.6 - Term 254295 - 254325 2.6 233 126 Tu 1 . - CDS 254327 - 255598 1154 ## COG0814 Amino acid permeases - Prom 255699 - 255758 1.7 + Prom 255829 - 255888 2.1 234 127 Tu 1 . + CDS 256014 - 256181 91 ## G2583_4275 hypothetical protein + Term 256232 - 256270 6.1 235 128 Tu 1 . + CDS 256467 - 256664 122 ## EC55989_3988 toxic polypeptide, small + Term 256715 - 256753 7.0 236 129 Tu 1 . + CDS 256950 - 257147 101 ## ECSE_3808 hypothetical protein + Term 257198 - 257235 8.1 - Term 256993 - 257052 0.3 237 130 Op 1 . - CDS 257234 - 258886 1396 ## ECH74115_4904 hypothetical protein 238 130 Op 2 . - CDS 258910 - 259101 206 ## ECO103_4265 hypothetical protein 239 130 Op 3 . - CDS 259098 - 260669 892 ## B21_03337 hypothetical protein - Prom 260725 - 260784 4.8 + Prom 260703 - 260762 4.3 240 131 Op 1 . + CDS 260942 - 261130 235 ## SSON_3856 hypothetical protein 241 131 Op 2 1/0.893 + CDS 261142 - 261894 672 ## COG1192 ATPases involved in chromosome partitioning 242 131 Op 3 . + CDS 261891 - 264509 2433 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 243 131 Op 4 . + CDS 264520 - 266859 2467 ## EC55989_3979 cellulose synthase regulator protein 244 131 Op 5 4/0.429 + CDS 266866 - 267972 1133 ## COG3405 Endoglucanase Y 245 131 Op 6 5/0.238 + CDS 267954 - 271427 3258 ## COG0457 FOG: TPR repeat 246 132 Tu 1 . + CDS 271548 - 273497 2093 ## COG2200 FOG: EAL domain + Term 273522 - 273575 4.3 + Prom 273532 - 273591 3.6 247 133 Tu 1 . + CDS 273680 - 274966 1551 ## COG1301 Na+/H+-dicarboxylate symporters + Term 274979 - 275020 6.1 + Prom 275150 - 275209 4.0 248 134 Tu 1 . + CDS 275229 - 276683 1606 ## COG0612 Predicted Zn-dependent peptidases + Term 276684 - 276731 3.3 - Term 276672 - 276717 5.0 249 135 Tu 1 . - CDS 276779 - 277708 1009 ## COG0524 Sugar kinases, ribokinase family - Prom 277933 - 277992 2.6 + Prom 277743 - 277802 2.8 250 136 Op 1 4/0.429 + CDS 277940 - 278707 639 ## COG2200 FOG: EAL domain 251 136 Op 2 . + CDS 278777 - 280837 1724 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis + Term 280895 - 280931 4.0 252 137 Tu 1 . - CDS 281071 - 282393 1678 ## COG0477 Permeases of the major facilitator superfamily - Prom 282541 - 282600 5.4 - Term 282753 - 282801 6.5 253 138 Op 1 3/0.679 - CDS 282804 - 283817 1096 ## COG1295 Predicted membrane protein 254 138 Op 2 . - CDS 283866 - 284747 716 ## COG0583 Transcriptional regulator - Prom 284821 - 284880 1.8 + Prom 285168 - 285227 4.3 255 139 Tu 1 . + CDS 285285 - 285887 451 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 285897 - 285946 8.4 - Term 285885 - 285934 8.4 256 140 Tu 1 . - CDS 285938 - 287587 1611 ## COG1626 Neutral trehalase - Prom 287699 - 287758 6.6 + Prom 287913 - 287972 4.1 257 141 Tu 1 . + CDS 287992 - 289389 1234 ## COG1858 Cytochrome c peroxidase + Term 289397 - 289438 8.8 258 142 Tu 1 . - CDS 289521 - 289667 82 ## - Prom 289739 - 289798 5.6 + Prom 289428 - 289487 6.0 259 143 Tu 1 . + CDS 289600 - 291000 1651 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins + Term 291020 - 291070 10.0 260 144 Tu 1 . + CDS 291430 - 292194 86 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 292379 - 292417 4.0 + Prom 292339 - 292398 7.7 261 145 Tu 1 . + CDS 292562 - 293290 138 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 293362 - 293389 -0.1 262 146 Tu 1 . + CDS 293435 - 293716 128 ## gi|293412945|ref|ZP_06655613.1| predicted protein - Term 293596 - 293641 10.6 263 147 Op 1 27/0.000 - CDS 293653 - 296766 3301 ## COG0841 Cation/multidrug efflux pump 264 147 Op 2 2/0.810 - CDS 296791 - 297948 982 ## COG0845 Membrane-fusion protein - Prom 298058 - 298117 2.8 265 148 Tu 1 . - CDS 298287 - 298814 372 ## COG2771 DNA-binding HTH domain-containing proteins - Term 299550 - 299595 12.6 266 149 Tu 1 . - CDS 299613 - 300185 520 ## COG3247 Uncharacterized conserved protein - Prom 300316 - 300375 5.2 + Prom 300293 - 300352 5.9 267 150 Op 1 . + CDS 300440 - 300772 486 ## EC55989_3953 acid-resistance protein + Term 300819 - 300861 0.4 + Prom 300785 - 300844 2.4 268 150 Op 2 . + CDS 300876 - 301214 321 ## SSON_3577 acid-resistance protein + Term 301232 - 301274 7.2 269 151 Tu 1 . + CDS 301278 - 301925 631 ## COG1285 Uncharacterized membrane protein - Term 301806 - 301851 0.5 270 152 Tu 1 . - CDS 301967 - 302470 333 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 302562 - 302621 6.1 - Term 302600 - 302641 9.3 271 153 Tu 1 . - CDS 302653 - 303219 643 ## COG3065 Starvation-inducible outer membrane lipoprotein - Prom 303405 - 303464 8.9 272 154 Tu 1 . - CDS 303843 - 304688 147 ## EcE24377A_3990 hypothetical protein - Prom 304864 - 304923 8.6 - Term 305058 - 305105 7.6 273 155 Tu 1 . - CDS 305269 - 306282 519 ## COG0701 Predicted permeases - Prom 306307 - 306366 3.8 + Prom 306306 - 306365 4.9 274 156 Tu 1 . + CDS 306389 - 306685 345 ## COG0640 Predicted transcriptional regulators 275 157 Op 1 2/0.810 - CDS 306819 - 307244 580 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 276 157 Op 2 7/0.048 - CDS 307257 - 308546 1565 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases 277 157 Op 3 . - CDS 308600 - 308953 236 ## COG0640 Predicted transcriptional regulators - Term 309330 - 309358 -1.0 278 158 Tu 1 . - CDS 309492 - 309665 121 ## EC55989_3940 hypothetical protein + Prom 309440 - 309499 4.7 279 159 Tu 1 . + CDS 309627 - 309776 111 ## EcE24377A_3983 hypothetical protein + Term 309795 - 309833 6.1 - Term 309783 - 309821 8.6 280 160 Op 1 7/0.048 - CDS 309830 - 311182 502 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 281 160 Op 2 . - CDS 311254 - 312096 926 ## COG2961 Protein involved in catabolism of external DNA - Prom 312155 - 312214 4.1 + Prom 312184 - 312243 3.1 282 161 Op 1 5/0.238 + CDS 312299 - 314341 2694 ## COG0339 Zn-dependent oligopeptidases 283 161 Op 2 . + CDS 314347 - 315099 773 ## COG0500 SAM-dependent methyltransferases + Term 315107 - 315144 9.4 - Term 315090 - 315136 12.5 284 162 Tu 1 . - CDS 315148 - 316617 1603 ## COG3104 Dipeptide/tripeptide permease - Prom 316738 - 316797 6.2 - Term 316873 - 316912 7.1 285 163 Tu 1 . - CDS 316935 - 317369 661 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 317566 - 317625 5.2 + Prom 317543 - 317602 2.2 286 164 Tu 1 . + CDS 317814 - 318095 224 ## G2583_4220 universal stress protein B - Term 318112 - 318149 6.9 287 165 Tu 1 . - CDS 318166 - 319665 1693 ## COG0306 Phosphate/sulphate permeases - Prom 319775 - 319834 6.9 + Prom 319750 - 319809 8.2 288 166 Tu 1 . + CDS 319897 - 321099 1034 ## COG2081 Predicted flavoproteins + Term 321129 - 321174 2.3 - Term 321353 - 321394 3.0 289 167 Tu 1 . - CDS 321415 - 322422 420 ## G2583_4217 inner membrane protein YhiM - Prom 322641 - 322700 7.9 + Prom 322629 - 322688 10.7 290 168 Op 1 . + CDS 322851 - 323693 216 ## EcE24377A_3971 hypothetical protein + Term 323763 - 323811 0.7 + Prom 323718 - 323777 4.0 291 168 Op 2 . + CDS 323817 - 324440 120 ## ECIAI1_3634 hypothetical protein + Term 324507 - 324549 2.6 + Prom 324565 - 324624 6.0 292 169 Tu 1 . + CDS 324702 - 326324 101 ## ECIAI1_3633 hypothetical protein + Prom 326423 - 326482 3.6 293 170 Op 1 10/0.000 + CDS 326690 - 327757 1090 ## COG0845 Membrane-fusion protein 294 170 Op 2 45/0.000 + CDS 327754 - 330489 2746 ## COG1131 ABC-type multidrug transport system, ATPase component 295 170 Op 3 . + CDS 330489 - 331613 1153 ## COG0842 ABC-type multidrug transport system, permease component 296 170 Op 4 . + CDS 331686 - 331961 111 ## ECO103_4210 HicA-like protein 297 170 Op 5 . + CDS 331958 - 332317 475 ## COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters + Term 332369 - 332418 6.3 298 171 Op 1 3/0.679 - CDS 332437 - 332838 524 ## COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 299 171 Op 2 17/0.000 - CDS 332844 - 333650 405 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 300 171 Op 3 44/0.000 - CDS 333647 - 334411 357 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 301 171 Op 4 49/0.000 - CDS 334411 - 335244 1064 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 302 171 Op 5 38/0.000 - CDS 335241 - 336185 254 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 303 171 Op 6 . - CDS 336185 - 337759 1770 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 337789 - 337848 4.7 304 172 Tu 1 . + CDS 337784 - 337960 68 ## UTI89_C3992 hypothetical protein + Term 338050 - 338086 2.0 - Term 337784 - 337824 3.0 305 173 Op 1 1/0.893 - CDS 337870 - 338457 538 ## COG2091 Phosphopantetheinyl transferase 306 173 Op 2 . - CDS 338512 - 339561 979 ## COG0628 Predicted permease - Prom 339582 - 339641 2.9 + Prom 339608 - 339667 2.2 307 174 Op 1 21/0.000 + CDS 339693 - 340430 898 ## COG0477 Permeases of the major facilitator superfamily + Term 340438 - 340473 -0.3 308 174 Op 2 . + CDS 340540 - 340905 309 ## COG0477 Permeases of the major facilitator superfamily + Term 340952 - 340996 5.1 - Term 340848 - 340895 7.6 309 175 Op 1 . - CDS 340909 - 341466 801 ## ECO103_4192 hypothetical protein 310 175 Op 2 . - CDS 341539 - 342204 643 ## COG1738 Uncharacterized conserved protein - Prom 342266 - 342325 4.2 + Prom 342342 - 342401 6.5 311 176 Tu 1 . + CDS 342425 - 342670 344 ## COG0425 Predicted redox protein, regulator of disulfide bond formation + Term 342735 - 342784 7.2 312 177 Op 1 5/0.238 - CDS 342772 - 344970 2199 ## COG2217 Cation transport ATPase - Term 345002 - 345033 3.4 313 177 Op 2 . - CDS 345044 - 345670 728 ## COG3714 Predicted membrane protein - Prom 345783 - 345842 2.6 + Prom 345728 - 345787 3.3 314 178 Tu 1 . + CDS 345811 - 346170 351 ## ECH74115_4787 hypothetical protein + Term 346251 - 346283 -1.0 - Term 345887 - 345928 2.1 315 179 Op 1 6/0.119 - CDS 346173 - 346442 367 ## COG3776 Predicted membrane protein 316 179 Op 2 . - CDS 346432 - 347028 190 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 - Prom 347158 - 347217 3.2 + Prom 347047 - 347106 5.1 317 180 Op 1 9/0.012 + CDS 347178 - 348674 748 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 318 180 Op 2 28/0.000 + CDS 348677 - 349345 348 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 319 180 Op 3 7/0.048 + CDS 349338 - 350396 1005 ## COG2177 Cell division protein + Term 350440 - 350479 3.7 + Prom 350485 - 350544 6.2 320 181 Tu 1 . + CDS 350641 - 351495 1041 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 351512 - 351553 7.2 + Prom 351571 - 351630 5.4 321 182 Tu 1 . + CDS 351766 - 352869 1428 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component + Term 353003 - 353039 2.4 - Term 352865 - 352896 2.1 322 183 Tu 1 . - CDS 353068 - 353451 353 ## ECO103_4179 hypothetical protein - Prom 353490 - 353549 5.4 323 184 Op 1 20/0.000 + CDS 353875 - 354984 1307 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component 324 184 Op 2 24/0.000 + CDS 355032 - 355958 1365 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 325 184 Op 3 19/0.000 + CDS 355955 - 357232 1512 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 326 184 Op 4 18/0.000 + CDS 357229 - 357996 258 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 327 184 Op 5 . + CDS 357998 - 358711 268 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 358785 - 358827 -0.8 + Prom 358972 - 359031 7.3 328 185 Op 1 35/0.000 + CDS 359107 - 360423 1653 ## COG1653 ABC-type sugar transport system, periplasmic component + Prom 360425 - 360484 2.6 329 185 Op 2 38/0.000 + CDS 360521 - 361408 1106 ## COG1175 ABC-type sugar transport systems, permease components 330 185 Op 3 21/0.000 + CDS 361405 - 362250 961 ## COG0395 ABC-type sugar transport system, permease component 331 185 Op 4 4/0.429 + CDS 362252 - 363322 1497 ## COG3839 ABC-type sugar transport systems, ATPase components 332 185 Op 5 . + CDS 363319 - 364062 784 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Term 364084 - 364127 8.1 - Term 363958 - 364001 7.0 333 186 Tu 1 . - CDS 364049 - 364489 340 ## S4297 hypothetical protein - Prom 364512 - 364571 3.7 + Prom 364463 - 364522 2.2 334 187 Tu 1 . + CDS 364609 - 366351 2016 ## COG0405 Gamma-glutamyltransferase + Term 366360 - 366393 5.4 335 188 Tu 1 . - CDS 366389 - 366673 252 ## B21_03248 hypothetical protein - Prom 366701 - 366760 3.4 336 189 Op 1 . - CDS 366873 - 367028 78 ## EC55989_3853 hypothetical protein - Prom 367051 - 367110 1.7 337 189 Op 2 . - CDS 367123 - 367578 224 ## ECIAI1_3588 hypothetical protein 338 189 Op 3 1/0.893 - CDS 367614 - 368792 293 ## COG3157 Hemolysin-coregulated protein (uncharacterized) - Prom 368867 - 368926 16.1 - Term 368963 - 368999 -1.0 339 190 Tu 1 . - CDS 369029 - 369517 347 ## PROTEIN SUPPORTED gi|229877854|ref|ZP_04497362.1| acetyltransferase, ribosomal protein N-acetylase - Prom 369547 - 369606 3.2 340 191 Tu 1 . - CDS 369750 - 369947 182 ## ECS88_3838 hypothetical protein + Prom 369580 - 369639 4.4 341 192 Tu 1 5/0.238 + CDS 369849 - 370886 1211 ## COG0673 Predicted dehydrogenases and related proteins + Term 370893 - 370945 3.6 + Prom 370899 - 370958 4.5 342 193 Tu 1 4/0.429 + CDS 371009 - 371704 938 ## COG1741 Pirin-related protein + Term 371725 - 371754 0.4 + Prom 371797 - 371856 4.4 343 194 Tu 1 . + CDS 371928 - 372923 1095 ## COG1609 Transcriptional regulators + Prom 372952 - 373011 2.0 344 195 Op 1 4/0.429 + CDS 373101 - 373589 531 ## COG3265 Gluconate kinase 345 195 Op 2 . + CDS 373593 - 374933 1530 ## COG2610 H+/gluconate symporter and related permeases + Term 374943 - 374978 5.2 346 196 Tu 1 . - CDS 374990 - 375583 608 ## COG2095 Multiple antibiotic transporter + Prom 375551 - 375610 3.7 347 197 Tu 1 . + CDS 375775 - 376878 1138 ## COG0136 Aspartate-semialdehyde dehydrogenase + Term 376897 - 376926 1.1 + Prom 376937 - 376996 3.1 348 198 Op 1 9/0.012 + CDS 377151 - 379337 2566 ## COG0296 1,4-alpha-glucan branching enzyme 349 198 Op 2 7/0.048 + CDS 379334 - 381307 1470 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 350 198 Op 3 17/0.000 + CDS 381325 - 382620 1307 ## COG0448 ADP-glucose pyrophosphorylase 351 198 Op 4 10/0.000 + CDS 382620 - 384053 1315 ## COG0297 Glycogen synthase 352 198 Op 5 2/0.810 + CDS 384072 - 386519 2894 ## COG0058 Glucan phosphorylase + Term 386535 - 386570 4.9 + Prom 386565 - 386624 2.3 353 199 Op 1 . + CDS 386647 - 388152 986 ## COG0226 ABC-type phosphate transport system, periplasmic component 354 199 Op 2 . + CDS 388167 - 388877 326 ## ECIAI1_3572 hypothetical protein 355 199 Op 3 . + CDS 388880 - 389647 228 ## EcE24377A_3904 hypothetical protein 356 199 Op 4 . + CDS 389650 - 390255 118 ## ECIAI1_3570 hypothetical protein - Term 390265 - 390301 7.1 357 200 Tu 1 . - CDS 390309 - 391814 1877 ## COG0578 Glycerol-3-phosphate dehydrogenase - Prom 391857 - 391916 5.7 + Prom 391843 - 391902 4.6 358 201 Op 1 4/0.429 + CDS 392004 - 392330 532 ## COG0607 Rhodanese-related sulfurtransferase 359 201 Op 2 6/0.119 + CDS 392375 - 393205 860 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 360 201 Op 3 . + CDS 393222 - 393980 907 ## COG1349 Transcriptional regulators of sugar metabolism 361 202 Tu 1 . - CDS 393962 - 395560 1375 ## COG4650 Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain - Prom 395657 - 395716 4.4 + Prom 395627 - 395686 5.2 362 203 Op 1 3/0.679 + CDS 395749 - 396975 1357 ## COG1690 Uncharacterized conserved protein 363 203 Op 2 . + CDS 396988 - 397995 832 ## COG0430 RNA 3'-terminal phosphate cyclase - Term 397993 - 398034 -1.0 364 204 Tu 1 . - CDS 398038 - 400743 2426 ## COG2909 ATP-dependent transcriptional regulator - Prom 400768 - 400827 6.1 + Prom 401176 - 401235 2.7 365 205 Op 1 7/0.048 + CDS 401355 - 403748 2787 ## COG0058 Glucan phosphorylase 366 205 Op 2 . + CDS 403758 - 405842 2024 ## COG1640 4-alpha-glucanotransferase + Term 405851 - 405893 9.1 367 206 Tu 1 . - CDS 405887 - 407203 1742 ## COG2610 H+/gluconate symporter and related permeases - Prom 407255 - 407314 4.0 - Term 407464 - 407499 0.7 368 207 Op 1 5/0.238 - CDS 407564 - 408139 729 ## COG0694 Thioredoxin-like proteins and domains 369 207 Op 2 . - CDS 408198 - 408881 284 ## COG1040 Predicted amidophosphoribosyltransferases + Prom 408829 - 408888 2.9 370 208 Tu 1 . + CDS 408919 - 409689 605 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 371 209 Op 1 1/0.893 - CDS 409718 - 410251 392 ## COG5464 Uncharacterized conserved protein 372 209 Op 2 . - CDS 410303 - 410596 360 ## COG5464 Uncharacterized conserved protein - Prom 410713 - 410772 2.4 - Term 410735 - 410772 6.1 373 210 Op 1 . - CDS 410799 - 411035 214 ## SDY_3666 hypothetical protein 374 210 Op 2 22/0.000 - CDS 411035 - 413356 2830 ## COG0370 Fe2+ transport system protein B 375 210 Op 3 4/0.429 - CDS 413373 - 413600 259 ## COG1918 Fe2+ transport system protein A - Prom 413814 - 413873 4.8 - Term 413924 - 413958 6.0 376 211 Op 1 1/0.893 - CDS 414038 - 416359 1644 ## PROTEIN SUPPORTED gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein - Prom 416392 - 416451 2.0 377 211 Op 2 . - CDS 416456 - 416932 664 ## COG0782 Transcription elongation factor - Prom 417014 - 417073 4.9 + Prom 416996 - 417055 11.2 378 212 Op 1 40/0.000 + CDS 417160 - 417879 906 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 379 212 Op 2 . + CDS 417876 - 419228 1232 ## COG0642 Signal transduction histidine kinase + Term 419234 - 419267 5.2 - Term 419222 - 419255 4.4 380 213 Tu 1 . - CDS 419304 - 420926 2069 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) + Prom 421024 - 421083 5.7 381 214 Tu 1 . + CDS 421305 - 423029 1311 ## G2583_4098 hypothetical protein - Term 423048 - 423083 7.4 382 215 Op 1 3/0.679 - CDS 423092 - 423970 1078 ## COG1281 Disulfide bond chaperones of the HSP33 family 383 215 Op 2 4/0.429 - CDS 423995 - 424396 443 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 384 215 Op 3 . - CDS 424407 - 425075 875 ## COG1011 Predicted hydrolase (HAD superfamily) - Term 425089 - 425135 10.1 385 215 Op 4 . - CDS 425140 - 427275 1736 ## EcSMS35_3676 hypothetical protein - Prom 427494 - 427553 5.3 + Prom 427453 - 427512 7.0 386 216 Tu 1 . + CDS 427595 - 428155 666 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 428299 - 428324 -0.5 - Term 428264 - 428301 1.0 387 217 Tu 1 . - CDS 428320 - 430872 2650 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein - Prom 430896 - 430955 3.4 + Prom 430860 - 430919 2.0 388 218 Op 1 . + CDS 430992 - 431771 658 ## B21_03199 hypothetical protein 389 218 Op 2 . + CDS 431771 - 432310 320 ## COG3166 Tfp pilus assembly protein PilN 390 218 Op 3 . + CDS 432294 - 432734 149 ## ECO103_4111 hypothetical protein 391 218 Op 4 . + CDS 432724 - 433128 268 ## B21_03196 hypothetical protein 392 218 Op 5 8/0.012 + CDS 433040 - 434278 1115 ## COG4796 Type II secretory pathway, component HofQ + Term 434358 - 434391 0.6 + Prom 434517 - 434576 3.9 393 219 Op 1 20/0.000 + CDS 434679 - 435200 556 ## COG0703 Shikimate kinase 394 219 Op 2 7/0.048 + CDS 435257 - 436345 907 ## COG0337 3-dehydroquinate synthetase + Term 436361 - 436391 2.7 395 220 Tu 1 6/0.119 + CDS 436437 - 437723 1051 ## COG3266 Uncharacterized protein conserved in bacteria + Term 437764 - 437802 -0.9 396 221 Op 1 6/0.119 + CDS 437830 - 438666 647 ## COG0338 Site-specific DNA methylase 397 221 Op 2 9/0.012 + CDS 438684 - 439361 778 ## COG0036 Pentose-5-phosphate-3-epimerase 398 221 Op 3 6/0.119 + CDS 439354 - 440112 948 ## COG0546 Predicted phosphatases 399 221 Op 4 . + CDS 440105 - 441109 1242 ## COG0180 Tryptophanyl-tRNA synthetase + Term 441235 - 441268 3.8 + Prom 441212 - 441271 4.7 400 222 Op 1 . + CDS 441378 - 442283 755 ## ECO103_4101 hypothetical protein 401 222 Op 2 . + CDS 442300 - 442662 378 ## SSON_3513 hypothetical protein + Prom 442667 - 442726 1.5 402 223 Op 1 2/0.810 + CDS 442746 - 443909 1307 ## COG3457 Predicted amino acid racemase 403 223 Op 2 1/0.893 + CDS 443909 - 445135 1204 ## COG1015 Phosphopentomutase 404 223 Op 3 . + CDS 445132 - 446010 1023 ## COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold 405 223 Op 4 . + CDS 446021 - 446374 546 ## SBO_3365 hypothetical protein 406 223 Op 5 . + CDS 446386 - 447690 1426 ## EC55989_3782 conserved hypothetical protein; putative inner membrane protein 407 223 Op 6 . + CDS 447702 - 448787 1001 ## JW3339 conserved hypothetical protein - Term 448817 - 448852 5.5 408 224 Tu 1 . - CDS 448894 - 449061 268 ## LF82_3285 uncharacterized protein YhfL - Prom 449095 - 449154 7.6 - Term 449269 - 449298 2.1 409 225 Op 1 3/0.679 - CDS 449308 - 450681 1354 ## COG0007 Uroporphyrinogen-III methylase 410 225 Op 2 3/0.679 - CDS 450700 - 451506 984 ## COG2116 Formate/nitrite family of transporters - Prom 451530 - 451589 11.5 - Term 451593 - 451623 3.4 411 226 Op 1 14/0.000 - CDS 451633 - 451959 494 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 412 226 Op 2 4/0.429 - CDS 451956 - 454499 2990 ## COG1251 NAD(P)H-nitrite reductase - Prom 454592 - 454651 5.0 - Term 454714 - 454752 7.0 413 227 Tu 1 . - CDS 454761 - 455942 1309 ## COG0477 Permeases of the major facilitator superfamily - Prom 456049 - 456108 7.3 + Prom 456075 - 456134 5.8 414 228 Tu 1 . + CDS 456213 - 456785 540 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Term 456795 - 456828 6.8 + Prom 456804 - 456863 2.9 415 229 Op 1 . + CDS 456890 - 457057 129 ## Z4723 hypothetical protein 416 229 Op 2 4/0.429 + CDS 457047 - 457649 715 ## COG2184 Protein involved in cell division 417 229 Op 3 5/0.238 + CDS 457681 - 458244 479 ## COG0512 Anthranilate/para-aminobenzoate synthases component II + Prom 458246 - 458305 6.9 418 229 Op 4 . + CDS 458330 - 459550 1336 ## COG4992 Ornithine/acetylornithine aminotransferase + Term 459575 - 459616 3.2 419 230 Op 1 4/0.429 - CDS 459617 - 461707 1688 ## COG1289 Predicted membrane protein - Term 461709 - 461746 8.2 420 230 Op 2 . - CDS 461758 - 462390 857 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 462540 - 462599 1.8 421 231 Tu 1 . + CDS 462692 - 463096 447 ## COG1765 Predicted redox protein, regulator of disulfide bond formation + Term 463107 - 463162 2.7 - Term 463044 - 463075 -0.8 422 232 Tu 1 6/0.119 - CDS 463151 - 464020 947 ## COG3954 Phosphoribulokinase 423 233 Op 1 5/0.238 - CDS 464074 - 464292 348 ## COG3089 Uncharacterized protein conserved in bacteria 424 233 Op 2 3/0.679 - CDS 464286 - 465248 888 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold 425 233 Op 3 . - CDS 465308 - 467221 2491 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 467325 - 467384 3.4 + Prom 467211 - 467270 4.7 426 234 Op 1 7/0.048 + CDS 467352 - 467903 455 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 427 234 Op 2 3/0.679 + CDS 467903 - 469708 1057 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 428 234 Op 3 4/0.429 + CDS 469718 - 469918 212 ## COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain + Term 469956 - 469997 0.7 + Prom 469925 - 469984 3.9 429 235 Tu 1 . + CDS 470013 - 470603 768 ## COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 + Term 470625 - 470653 2.1 - Term 470600 - 470648 10.2 430 236 Tu 1 . - CDS 470652 - 470870 316 ## COG2900 Uncharacterized protein conserved in bacteria - Prom 470978 - 471037 3.3 + Prom 470940 - 470999 3.4 431 237 Tu 1 . + CDS 471091 - 471903 986 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 + Term 471911 - 471950 9.8 + Prom 471909 - 471968 5.5 432 238 Op 1 6/0.119 + CDS 472070 - 472792 789 ## COG2964 Uncharacterized protein conserved in bacteria 433 238 Op 2 13/0.000 + CDS 472792 - 473178 454 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction 434 238 Op 3 10/0.000 + CDS 473178 - 473537 250 ## COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur 435 238 Op 4 7/0.048 + CDS 473545 - 473832 292 ## COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur 436 238 Op 5 56/0.000 + CDS 473898 - 474332 744 ## PROTEIN SUPPORTED gi|226956878|ref|YP_002807671.1| 30S ribosomal subunit protein S12 + Prom 474341 - 474400 2.1 437 238 Op 6 51/0.000 + CDS 474429 - 474899 777 ## PROTEIN SUPPORTED gi|15803854|ref|NP_289888.1| 30S ribosomal protein S7 + Term 474925 - 474960 3.1 + Prom 474913 - 474972 1.6 438 238 Op 7 30/0.000 + CDS 474996 - 477110 2275 ## COG0480 Translation elongation factors (GTPases) 439 238 Op 8 2/0.810 + CDS 477181 - 478365 1634 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 478395 - 478422 1.5 + Prom 478468 - 478527 5.7 440 239 Op 1 9/0.012 + CDS 478548 - 478742 172 ## COG2906 Bacterioferritin-associated ferredoxin 441 239 Op 2 . + CDS 478815 - 479291 568 ## COG2193 Bacterioferritin (cytochrome b1) - Term 479005 - 479049 4.9 442 240 Tu 1 . - CDS 479288 - 479755 342 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases - Prom 479858 - 479917 2.6 443 241 Tu 1 . - CDS 479940 - 480071 58 ## - Prom 480104 - 480163 2.2 + Prom 479904 - 479963 5.3 444 242 Op 1 40/0.000 + CDS 480134 - 480445 513 ## PROTEIN SUPPORTED gi|15803848|ref|NP_289882.1| 30S ribosomal protein S10 445 242 Op 2 58/0.000 + CDS 480478 - 481107 1056 ## PROTEIN SUPPORTED gi|15803847|ref|NP_289881.1| 50S ribosomal protein L3 446 242 Op 3 61/0.000 + CDS 481118 - 481723 992 ## PROTEIN SUPPORTED gi|15803846|ref|NP_289880.1| 50S ribosomal protein L4 447 242 Op 4 61/0.000 + CDS 481720 - 482022 490 ## PROTEIN SUPPORTED gi|15803845|ref|NP_289879.1| 50S ribosomal protein L23 448 242 Op 5 60/0.000 + CDS 482040 - 482861 1438 ## PROTEIN SUPPORTED gi|15803844|ref|NP_289878.1| 50S ribosomal protein L2 449 242 Op 6 59/0.000 + CDS 482878 - 483156 484 ## PROTEIN SUPPORTED gi|15803843|ref|NP_289877.1| 30S ribosomal protein S19 450 242 Op 7 61/0.000 + CDS 483171 - 483503 537 ## PROTEIN SUPPORTED gi|15803842|ref|NP_289876.1| 50S ribosomal protein L22 451 242 Op 8 50/0.000 + CDS 483521 - 484222 1183 ## PROTEIN SUPPORTED gi|15833433|ref|NP_312206.1| 30S ribosomal protein S3 452 242 Op 9 50/0.000 + CDS 484235 - 484645 694 ## PROTEIN SUPPORTED gi|15803840|ref|NP_289874.1| 50S ribosomal protein L16 453 242 Op 10 50/0.000 + CDS 484645 - 484836 301 ## PROTEIN SUPPORTED gi|15803839|ref|NP_289873.1| 50S ribosomal protein L29 454 242 Op 11 50/0.000 + CDS 484836 - 485090 431 ## PROTEIN SUPPORTED gi|15803838|ref|NP_289872.1| 30S ribosomal protein S17 + Term 485112 - 485155 10.3 + Prom 485124 - 485183 7.1 455 243 Op 1 57/0.000 + CDS 485255 - 485626 617 ## PROTEIN SUPPORTED gi|15803837|ref|NP_289871.1| 50S ribosomal protein L14 456 243 Op 2 48/0.000 + CDS 485637 - 485951 516 ## PROTEIN SUPPORTED gi|15803836|ref|NP_289870.1| 50S ribosomal protein L24 457 243 Op 3 50/0.000 + CDS 485966 - 486505 911 ## PROTEIN SUPPORTED gi|15803835|ref|NP_289869.1| 50S ribosomal protein L5 458 243 Op 4 50/0.000 + CDS 486520 - 486825 513 ## PROTEIN SUPPORTED gi|15803834|ref|NP_289868.1| 30S ribosomal protein S14 459 243 Op 5 55/0.000 + CDS 486859 - 487251 641 ## PROTEIN SUPPORTED gi|15803833|ref|NP_289867.1| 30S ribosomal protein S8 460 243 Op 6 46/0.000 + CDS 487264 - 487797 902 ## PROTEIN SUPPORTED gi|15803832|ref|NP_289866.1| 50S ribosomal protein L6 461 243 Op 7 56/0.000 + CDS 487807 - 488160 572 ## PROTEIN SUPPORTED gi|15803831|ref|NP_289865.1| 50S ribosomal protein L18 462 243 Op 8 50/0.000 + CDS 488175 - 488678 834 ## PROTEIN SUPPORTED gi|15803830|ref|NP_289864.1| 30S ribosomal protein S5 463 243 Op 9 48/0.000 + CDS 488682 - 488861 291 ## PROTEIN SUPPORTED gi|15803829|ref|NP_289863.1| 50S ribosomal protein L30 464 243 Op 10 53/0.000 + CDS 488865 - 489299 715 ## PROTEIN SUPPORTED gi|15803828|ref|NP_289862.1| 50S ribosomal protein L15 465 243 Op 11 . + CDS 489307 - 490638 1258 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 466 243 Op 12 . + CDS 490670 - 490786 198 ## PROTEIN SUPPORTED gi|15803826|ref|NP_289860.1| 50S ribosomal protein L36 + Term 490816 - 490857 8.2 + Prom 490828 - 490887 3.9 467 244 Op 1 48/0.000 + CDS 490933 - 491289 586 ## PROTEIN SUPPORTED gi|15803825|ref|NP_289859.1| 30S ribosomal protein S13 468 244 Op 2 36/0.000 + CDS 491306 - 491695 669 ## PROTEIN SUPPORTED gi|15803824|ref|NP_289858.1| 30S ribosomal protein S11 469 244 Op 3 26/0.000 + CDS 491729 - 492349 1038 ## PROTEIN SUPPORTED gi|15803823|ref|NP_289857.1| 30S ribosomal protein S4 470 244 Op 4 50/0.000 + CDS 492375 - 493364 1007 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 471 244 Op 5 . + CDS 493405 - 493788 636 ## PROTEIN SUPPORTED gi|15803821|ref|NP_289855.1| 50S ribosomal protein L17 + Term 493809 - 493834 -0.5 + Prom 493806 - 493865 5.0 472 245 Op 1 . + CDS 493894 - 494262 299 ## ECH74115_4615 hypothetical protein 473 245 Op 2 . + CDS 494273 - 494698 425 ## COG0789 Predicted transcriptional regulators + Term 494909 - 494961 12.7 474 246 Tu 1 . - CDS 494969 - 495379 442 ## COG1970 Large-conductance mechanosensitive channel - Prom 495413 - 495472 6.9 - Term 495468 - 495507 8.6 475 247 Op 1 8/0.012 - CDS 495509 - 496885 1206 ## COG0569 K+ transport systems, NAD-binding component 476 247 Op 2 20/0.000 - CDS 496907 - 498169 1174 ## COG0144 tRNA and rRNA cytosine-C5-methylases - Term 498197 - 498225 2.1 477 247 Op 3 26/0.000 - CDS 498242 - 499189 906 ## COG0223 Methionyl-tRNA formyltransferase 478 247 Op 4 . - CDS 499204 - 499713 533 ## COG0242 N-formylmethionyl-tRNA deformylase - Prom 499752 - 499811 3.5 + Prom 499647 - 499706 2.4 479 248 Op 1 8/0.012 + CDS 499843 - 500967 289 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 480 248 Op 2 7/0.048 + CDS 500939 - 501412 579 ## COG2922 Uncharacterized protein conserved in bacteria 481 248 Op 3 6/0.119 + CDS 501441 - 501983 184 ## COG0551 Zn-finger domain associated with topoisomerase type I 482 248 Op 4 8/0.012 + CDS 501988 - 502506 348 ## COG0009 Putative translation factor (SUA5) 483 248 Op 5 . + CDS 502564 - 503382 393 ## COG0169 Shikimate 5-dehydrogenase 484 248 Op 6 . + CDS 503379 - 503636 180 ## B21_03082 hypothetical protein 485 249 Tu 1 . - CDS 503612 - 504166 441 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily - Prom 504289 - 504348 2.8 + SSU_RRNA 504639 - 505894 99.0 # CP000800 [D:4263705..4265246] # 16S ribosomal RNA # Escherichia coli E24377A # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. Predicted protein(s) >gi|299856450|gb|ADWV01000001.1| GENE 1 946 - 1638 575 230 aa, chain + ## HITS:1 COG:ZyieP KEGG:ns NR:ns ## COG: ZyieP COG2186 # Protein_GI_number: 15804355 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 EDL933 # 1 230 1 230 230 461 99.0 1e-130 MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELGEQFGVSRTAVREAVKT LTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENFHQVIDHFLVMRICLEPQACL LAATVGTAEQKAHLNTLMAEMAALKENFRRERWIEVDMAWHEHIYEMSANPFLTSFASLF HSVYHTYFTSITSDTVIKLDLHQAIVDAIVQSDGDAAFKACQALLRSPDK >gi|299856450|gb|ADWV01000001.1| GENE 2 1661 - 3088 926 475 aa, chain + ## HITS:1 COG:yieO KEGG:ns NR:ns ## COG: yieO COG0477 # Protein_GI_number: 16131622 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 475 1 475 475 830 99.0 0 MSDKKKRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRSPLAMQSAIISYTLTVA MLIPVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQLVVFRVIQGIGGAMMMPVA RLALLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVTWATWHWIFLINIPIGIAGLL YARKHMPNFTTARRRFDITGFLLFGLSLVLFSSGIELFGEKIVASWIALTVIVTSIGLLL LYILHARHTPNPLISLDLFKTRTFSIGIVGNIATRLGTGCVPFLMPLMLQVGFGYQAFIA GCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGITVIIGLMIAQFSLQSPAMAIWMLILP LFILGMAMSTQFTAMNTITLADLTDDNASSGNSVLAVTQQLSISLGVAVSAAVLRVYEGM EGTTTVEQFHYTFITMGIITVASAAMFMLLKTTDGNNLIKRQRKSKPNRVPSESE >gi|299856450|gb|ADWV01000001.1| GENE 3 3054 - 4037 886 327 aa, chain - ## HITS:1 COG:ECs4695 KEGG:ns NR:ns ## COG: ECs4695 COG1609 # Protein_GI_number: 15833949 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 327 4 330 330 656 100.0 0 MKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTHTIG MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC TETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTRIACI TGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSHPLRPQAVF TGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGELAIDV LIHRITQPTLQQQRLQLTPILMERGSA >gi|299856450|gb|ADWV01000001.1| GENE 4 4050 - 4994 813 314 aa, chain - ## HITS:1 COG:ECs4694 KEGG:ns NR:ns ## COG: ECs4694 COG0524 # Protein_GI_number: 15833948 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 6 314 1 309 309 529 100.0 1e-150 MDIPNMQNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSG ANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAG ANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPD ELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNG EGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSV PWREEIDAFLDRQR >gi|299856450|gb|ADWV01000001.1| GENE 5 5105 - 5995 1101 296 aa, chain - ## HITS:1 COG:ECs4693 KEGG:ns NR:ns ## COG: ECs4693 COG1879 # Protein_GI_number: 15833947 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 493 100.0 1e-139 MNMKKLATLVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLV VLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATKG EVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFN VLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFD GTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQAKYPVDLKLVVKQ >gi|299856450|gb|ADWV01000001.1| GENE 6 6020 - 6985 1323 321 aa, chain - ## HITS:1 COG:ECs4692 KEGG:ns NR:ns ## COG: ECs4692 COG1172 # Protein_GI_number: 15833946 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 481 100.0 1e-135 MTTQTVSGRRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMA VGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVA KGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMG IVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVA RLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSY YQMIVKAVVILLAVLVDNKKQ >gi|299856450|gb|ADWV01000001.1| GENE 7 6990 - 8495 1772 501 aa, chain - ## HITS:1 COG:rbsA KEGG:ns NR:ns ## COG: rbsA COG1129 # Protein_GI_number: 16131617 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Escherichia coli K12 # 1 501 1 501 501 962 99.0 0 MEALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYARDAGT LLWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYA EADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESL FRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGR KLEDQYPHLDKAPGDIRLKVDNLCGPGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYG ALPRTSGYVTLDGHEVVTRSPQDGLASGIVYISEDRKRDGLVLGMSVKENMSLTALRYFS RAGGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILD EPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTRE QATQEVLMAAAVGKLNRVNQE >gi|299856450|gb|ADWV01000001.1| GENE 8 8503 - 8922 377 139 aa, chain - ## HITS:1 COG:rbsD KEGG:ns NR:ns ## COG: rbsD COG1869 # Protein_GI_number: 16131616 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Escherichia coli K12 # 1 139 13 151 151 253 99.0 6e-68 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN EMQVEAAIIAEEIKQHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI RSGECSPYANIILCAGVTF >gi|299856450|gb|ADWV01000001.1| GENE 9 9089 - 10957 1676 622 aa, chain - ## HITS:1 COG:ECs4689 KEGG:ns NR:ns ## COG: ECs4689 COG3158 # Protein_GI_number: 15833943 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Escherichia coli O157:H7 # 1 622 1 622 622 1177 99.0 0 MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLL IFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSMLVIMGLIGGSFFYGEVVIT PAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKHGTAMVGKLFAPIMLTWFLIL AGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIALGAVVLSITGVEALYADMGHFGK FPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLIIAALATVIA SQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWMLYVAVVIVIVSFEHS SNLAAAYGIAVTGTMVLTSILSTTVARQNWHWNKYFVALILIAFLCVDIPLFTANLDKLL SGGWLPLSLGTVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYM SRAINVIPFALMHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPTFWRVVASY GWRETPNVEEVFHRCGLEGLSCRMMETSFFMSHESLILGKRPWYLRLRGKLYLLLQRNAL RAPDQFEIPPNRVIELGTQVEI >gi|299856450|gb|ADWV01000001.1| GENE 10 11180 - 12676 1425 498 aa, chain + ## HITS:1 COG:yieN KEGG:ns NR:ns ## COG: yieN COG0714 # Protein_GI_number: 16131614 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Escherichia coli K12 # 1 498 9 506 506 946 99.0 0 MAHPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLK FAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTSGYLPEAEIVFLDEIWKAG PAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKV QDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKEIGEITLPDHVFELIFMLRQQLD KLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLILLKDCLWYDAQSLNLIQQQIDV LMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKTALTVIRLGGIFSRRQQYQLPVNVTAS TLTLLLQKPLKLHDMEVVHISFERNALEQWLSKGGEIRGKLNGIGFAQKLNLEVDSAQHL VVRDVSLQGSTLALPGSSAEGLPGEIKQQLEELESDWRKQHALFSEQQKCLFIPGDWLGR IEASLQDVGAQIRQAQQC >gi|299856450|gb|ADWV01000001.1| GENE 11 12670 - 14121 1184 483 aa, chain + ## HITS:1 COG:ECs4687 KEGG:ns NR:ns ## COG: ECs4687 COG2425 # Protein_GI_number: 15833941 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Escherichia coli O157:H7 # 1 473 1 473 483 890 99.0 0 MLTLDTLNVMLAVSEEGLIEEMIIALLASPQLAVFFEKFPRLKAAITDDVPRWREALRSR LKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILDLLHRLNSPWAEQARQLVDANSTI TSALHTLFLQRWRLSLIVQATTLNQQLLEEEREQLLSEVQERMTLSGQLEPILADNNTAA GRLWDMSAGQLKRGDYQLIVKYGEFLNEQPELKRLAEQLGRSREAKSIPRNDAQMEAFRT MVREPATVPEQVDGLQQSDDILRLLPPELATLGITELEYEFYRRLVEKQLLTYRLHGESW REKVIERPVVHKDYDEQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALMRIALAENRRCYI MLFSTEIVRYELSGPQGIEQAIRFLSQQFRGGTDLASCFRAIMERLQSREWFDADAVVIS DFIAQRLPDDVTSKVKELQRVHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGMRSRLLRR WRR >gi|299856450|gb|ADWV01000001.1| GENE 12 14126 - 15118 1174 330 aa, chain - ## HITS:1 COG:asnA KEGG:ns NR:ns ## COG: asnA COG2502 # Protein_GI_number: 16131612 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Escherichia coli K12 # 1 330 1 330 330 656 99.0 0 MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVK ALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWE RVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDL DAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDYDDWSTPSELGHAGLNGDILVWN PVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLELEWHQALLRGEMPQTIGGGIGQSRL TMLLLQLPHIGQVQCGVWPAAVRENVPSLL >gi|299856450|gb|ADWV01000001.1| GENE 13 15270 - 15728 510 152 aa, chain + ## HITS:1 COG:ECs4685 KEGG:ns NR:ns ## COG: ECs4685 COG1522 # Protein_GI_number: 15833939 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 152 1 152 152 296 100.0 8e-81 MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVEKMKQAGIITGARIDVS PKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTTGHYSIFIKVMCRSIDALQ HVLINKIQTIDEIQSTETLIVLQNPIMRTIKP >gi|299856450|gb|ADWV01000001.1| GENE 14 15818 - 16261 585 147 aa, chain + ## HITS:1 COG:ECs4684 KEGG:ns NR:ns ## COG: ECs4684 COG0716 # Protein_GI_number: 15833938 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 277 99.0 4e-75 MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDLSASGIWLIISSTHGAG DIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGET LKINILDHDIPEDPAEEWLGSWINLLK >gi|299856450|gb|ADWV01000001.1| GENE 15 16640 - 18529 2015 629 aa, chain + ## HITS:1 COG:gidA KEGG:ns NR:ns ## COG: gidA COG0445 # Protein_GI_number: 16131609 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Escherichia coli K12 # 1 629 1 629 629 1248 100.0 0 MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV KEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS IPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV PCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPE GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESK FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTL GTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRL KSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAE QVEIQVKYEGYIARQQDEIEKQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQ ASRISGVTPAAISILLVWLKKQGMLRRSA >gi|299856450|gb|ADWV01000001.1| GENE 16 18593 - 19216 548 207 aa, chain + ## HITS:1 COG:ECs4682 KEGG:ns NR:ns ## COG: ECs4682 COG0357 # Protein_GI_number: 15833936 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 411 100.0 1e-115 MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVV APYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPV QSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEY QVESVVKLQVPALDGERHLVVIKANKI >gi|299856450|gb|ADWV01000001.1| GENE 17 19833 - 20213 210 126 aa, chain + ## HITS:1 COG:ECs4681 KEGG:ns NR:ns ## COG: ECs4681 COG3312 # Protein_GI_number: 15833935 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit I # Organism: Escherichia coli O157:H7 # 1 126 5 130 130 157 100.0 6e-39 MSVSLVSRNVARKLLLVQLLVVIASGLLFSLKDPFWGVSAISGGLAVFLPNVLFMIFAWR HQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFLPLIVTWVLVLVVQILAPA VINNKG >gi|299856450|gb|ADWV01000001.1| GENE 18 20222 - 21037 768 271 aa, chain + ## HITS:1 COG:STM3871 KEGG:ns NR:ns ## COG: STM3871 COG0356 # Protein_GI_number: 16767155 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Salmonella typhimurium LT2 # 1 271 1 271 271 467 96.0 1e-131 MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINIDSMFFSVVLGLLFLVLF RSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDL LPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTL QPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVP WAIFHILIITLQAFIFMVLTIVYLSMASEEH >gi|299856450|gb|ADWV01000001.1| GENE 19 21084 - 21323 376 79 aa, chain + ## HITS:1 COG:BU003 KEGG:ns NR:ns ## COG: BU003 COG0636 # Protein_GI_number: 15616633 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Buchnera sp. APS # 1 79 1 79 79 97 83.0 5e-21 MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLV DAIPMIAVGLGLYVMFAVA >gi|299856450|gb|ADWV01000001.1| GENE 20 21385 - 21855 593 156 aa, chain + ## HITS:1 COG:ECs4678 KEGG:ns NR:ns ## COG: ECs4678 COG0711 # Protein_GI_number: 15833932 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 201 100.0 5e-52 MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGLASAERAHKDLDLAKAS ATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREEL RKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL >gi|299856450|gb|ADWV01000001.1| GENE 21 21870 - 22403 536 177 aa, chain + ## HITS:1 COG:ECs4677 KEGG:ns NR:ns ## COG: ECs4677 COG0712 # Protein_GI_number: 15833931 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Escherichia coli O157:H7 # 1 177 1 177 177 300 100.0 8e-82 MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAES FIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQ QLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVIDGSVRGRLERLADVLQS >gi|299856450|gb|ADWV01000001.1| GENE 22 22416 - 23957 1853 513 aa, chain + ## HITS:1 COG:ECs4676 KEGG:ns NR:ns ## COG: ECs4676 COG0056 # Protein_GI_number: 15833930 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 513 1 513 513 986 100.0 0 MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLADCMQGEMISLPGNRY AIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGP LDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTALAI DAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQYLAPY AGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLER AARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLF NAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQ LDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAALLAYVDRDHA PLMQEINQTGGYNDEIEGKLKGILDSFKATQSW >gi|299856450|gb|ADWV01000001.1| GENE 23 24008 - 24871 993 287 aa, chain + ## HITS:1 COG:ECs4675 KEGG:ns NR:ns ## COG: ECs4675 COG0224 # Protein_GI_number: 15833929 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 555 100.0 1e-158 MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGN LEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGS KGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMS QVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQ AARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV >gi|299856450|gb|ADWV01000001.1| GENE 24 24898 - 26280 1701 460 aa, chain + ## HITS:1 COG:ECs4674 KEGG:ns NR:ns ## COG: ECs4674 COG0055 # Protein_GI_number: 15833928 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Escherichia coli O157:H7 # 1 460 1 460 460 890 100.0 0 MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSS DGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEEL SNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGV GERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVP ADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARG VQSILQRYQELKDIIAILGMDELSEEDKLVVARARKIQRFLSQPFFVAEVFTGSPGKYVS LKDTIRGFKGIMEGEYDHLPEQAFYMVGSIEEAVEKAKKL >gi|299856450|gb|ADWV01000001.1| GENE 25 26301 - 26720 463 139 aa, chain + ## HITS:1 COG:atpC KEGG:ns NR:ns ## COG: atpC COG0355 # Protein_GI_number: 16131599 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Escherichia coli K12 # 1 139 1 139 139 246 100.0 1e-65 MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHE EFIYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASA ELAKAIAQLRVIELTKKAM >gi|299856450|gb|ADWV01000001.1| GENE 26 27071 - 28441 1717 456 aa, chain + ## HITS:1 COG:ECs4672 KEGG:ns NR:ns ## COG: ECs4672 COG1207 # Protein_GI_number: 15833926 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Escherichia coli O157:H7 # 1 456 1 456 456 890 100.0 0 MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGD LLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDA KPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATDEQRQIQEINTGILIANGADM KRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQ SEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKN SVIGDDCEISPYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSK AGHLTYLGDAEIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGAT IAAGTTVTRNVGENALAISRVPQTQKEGWRRPVKKK >gi|299856450|gb|ADWV01000001.1| GENE 27 28603 - 30432 2354 609 aa, chain + ## HITS:1 COG:glmS KEGG:ns NR:ns ## COG: glmS COG0449 # Protein_GI_number: 16131597 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Escherichia coli K12 # 1 609 1 609 609 1196 100.0 0 MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAE EHPLHGGTGIAHTRWATHGEPSEVNAHPHVSEHIVVVHNGIIENHEPLREELKARGYTFV SETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLV IGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRRSVNIFDKTGAEVKRQDIESNLQ YDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILA CGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGL RLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKL SRLKGLDASIEHDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIA LEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRAR GGQLYVFADQDAGFVSSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPR NLAKSVTVE >gi|299856450|gb|ADWV01000001.1| GENE 28 30734 - 31306 496 190 aa, chain + ## HITS:1 COG:ECs4670 KEGG:ns NR:ns ## COG: ECs4670 COG3539 # Protein_GI_number: 15833924 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 190 1 200 200 193 55.0 1e-49 MKRNIIGGAFTLASLMLAGHALAEDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAF SGVGSLASPQKFSIKLENCPATYTQAAVRFDGTEAPGGDGDLKVGTPLTAGNPGDFTGTG QAIAATGVGIRIFNQSDNSQVKLYNDSAYTAIDAEGKAEMKFIARYVATNATVTAGTANA DSQFTVEYKK >gi|299856450|gb|ADWV01000001.1| GENE 29 31570 - 32550 438 326 aa, chain + ## HITS:1 COG:yi52_g6 KEGG:ns NR:ns ## COG: yi52_g6 COG3039 # Protein_GI_number: 16129935 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Escherichia coli K12 # 1 326 13 338 338 645 100.0 0 MSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETM LRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQ LFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAH IGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWL IAERPGKVRTLKQHPRKNKTAINIEYMKASIRAKVEHPFRIIKRQFGFVKARYKGLLKND NQLAMLFTLANLFRADQMIRQWERSH >gi|299856450|gb|ADWV01000001.1| GENE 30 32892 - 33284 219 130 aa, chain + ## HITS:1 COG:Z2201 KEGG:ns NR:ns ## COG: Z2201 COG3121 # Protein_GI_number: 15801632 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 EDL933 # 1 130 109 238 239 98 38.0 3e-21 MPDDRESVFWLNIKNIPPSASNKATNSLEIAVKTRIKLFWRPANIRLIPEDAAPKVKWRR EGRNLIAENPNPIHISVMDVIVDGHDVPLNMIRPFETLTLPLPANSAGGQMTWRFINDYG AVSDPIKMTL >gi|299856450|gb|ADWV01000001.1| GENE 31 33309 - 34925 1081 538 aa, chain + ## HITS:1 COG:ECs4667 KEGG:ns NR:ns ## COG: ECs4667 COG3188 # Protein_GI_number: 15833921 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 538 1 538 844 765 67.0 0 MMTTRIVVGLTAGTCLIFSQNLMAEVSVFNPALLEIDHQSGVDIRQFNRANLMPPGVYSV DIFINGKMFERQDVTFVQDNPDADLHACFIAIKKTLSSFGIKVDALKSFNDVDETVCLDP APRIEGSSWQFDSDKLQLNISIPQIYMDAMAYDYISPTRWDEGINALTINYDFSGSHTLR SDYGSQETDTSYLNLRNGLNIGPWRLRNYSTLNTSDGRAEYNSISTWIQRDIAALRSQIM IGDTWTASDIFDSTQIRGARLYTDNDMLPASQNGFAPVVRGIAKSNATVIIRQNGYVIYQ SAVPQGAFEITDLNTASTGGDLDVTIKEEDGSEQRFTQPYASLAILKREGQTDVDVSVGE LRDEDGFTPDVLQAQILHGFSHGITLYGGMQAAENYGSAALGVGKDLGALGAISFDVTHA RANFSHDDTETGQSYRFLYSKRFDDTDTSLRLVGYRYSTEGYYTLNEWASRRNSPEDFWE TGNRRSRVEGTLTQSLGRDYGNLYLTLSRQQYWHTDDVERLMQFGYSSSWKRLSWNVS >gi|299856450|gb|ADWV01000001.1| GENE 32 34998 - 35831 456 277 aa, chain + ## HITS:1 COG:ECs4667 KEGG:ns NR:ns ## COG: ECs4667 COG3188 # Protein_GI_number: 15833921 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 276 567 843 844 330 58.0 2e-90 MLSLSVPLSGWWGNSYATYSVSQNDNSGSSHQLGLSGTALERNNLSWSLMQSYNSHDDEV GGNMSLTYDGSYGTVNGSYNYSQNSQRLNYGIRGGILAHSEGVTLSQELGETIALVKAPG AAGLEIDNMRGAATDWRGYTVKTQLNPYDENRVAISDNYFSKSNIELDNTVVTMVPTRGA VVKAEFVTHVGYRVLFRVLNANGKPVPFGAIAAIQDASLADSGIVGDRGELYLSGLPEKG QVTLSWGENASTKCIFNYSLSTPESESGLIEQGVTCH >gi|299856450|gb|ADWV01000001.1| GENE 33 35842 - 36915 315 357 aa, chain + ## HITS:1 COG:ECs4665 KEGG:ns NR:ns ## COG: ECs4665 COG3539 # Protein_GI_number: 15833919 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 356 1 359 360 249 42.0 6e-66 MNKYIKQWCFAVFMLSLSSVALAAPKGICTPDNGVFHSTLDFSGYLITANENKVGTTFNT TVTNGSSYPGRCHCDTGNVGEFPYIYYTSKINQALTYAGVHSNINYYDLNPNLDVGIAID ILGVGYVNAPFEYHANNPSGNTKYNCNRIEPLSISSGAKAIVYFYIKKTFAGKLIIPETK IVTLYGTISRDTPVDYSQPMADVYIRGDISAPQSCEINNLQPVYFDFKEIPAADFSSVVG SAVTTHKITKTVTIECENLGILNTDDISTSFYATEPNTDNSMVVTSNSNVGIKIYDKNNK EIKVNGGELPTDMGKSTVYGEKSGSVTFSAAPASLTGARPAPGQFTATATITVEIVR >gi|299856450|gb|ADWV01000001.1| GENE 34 37163 - 38203 1195 346 aa, chain + ## HITS:1 COG:pstS KEGG:ns NR:ns ## COG: pstS COG0226 # Protein_GI_number: 16131596 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 346 1 346 346 632 100.0 0 MKVMRTTVATVVAATLSMSAFSVFAEASLTGAGATFPAPVYAKWADTYQKETGNKVNYQG IGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIGGVVLAVNIPGLKSGELVL DGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGTSFVFTSYLAKVNEE WKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGYVEYAYAKQNNLAYTKLISADGK PVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWPITSTTFILIHKDQKKPEQGTEVLK FFDWAYKTGAKQANDLDYASLPDSVVEQVRAAWKTNIKDSSGKPLY >gi|299856450|gb|ADWV01000001.1| GENE 35 38290 - 39249 1265 319 aa, chain + ## HITS:1 COG:ECs4663 KEGG:ns NR:ns ## COG: ECs4663 COG0573 # Protein_GI_number: 15833917 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 319 1 319 319 535 100.0 1e-152 MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTK EWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLA AIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGALFSGPAFGIGILAAGVILAIM IIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALG ETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFI VLAASKFMIMRLAKNEGAR >gi|299856450|gb|ADWV01000001.1| GENE 36 39249 - 40139 1178 296 aa, chain + ## HITS:1 COG:ECs4662 KEGG:ns NR:ns ## COG: ECs4662 COG0581 # Protein_GI_number: 15833916 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 507 100.0 1e-144 MAMVEMQTTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFWLIWILMSTITRGIDGM SLALFTEMTPPPNTEGGGLANALAGSGLLILWATVFGTPLGIMAGIYLAEYGRKSWLAEV IRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIALALLQVPIVIRTTENMLKLVP DSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAIARIAGETAPLLFTALSNQFWST DMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIITLCVLLLNILARVVFAKNKHG >gi|299856450|gb|ADWV01000001.1| GENE 37 40230 - 41003 345 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 11 252 2 239 245 137 36 7e-31 MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMF ELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEK LSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEP CSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSNTDDLF TKPAKKQTEDYITGRYG >gi|299856450|gb|ADWV01000001.1| GENE 38 41018 - 41743 885 241 aa, chain + ## HITS:1 COG:phoU KEGG:ns NR:ns ## COG: phoU COG0704 # Protein_GI_number: 16131592 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Escherichia coli K12 # 1 241 1 241 241 444 99.0 1e-125 MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMHNQDSDLAKRVIEGDKN VNMMEVAIDEACVRIIAKRQPTASDLRLVMVISKTIAELERIGDVADKICRTALEKFSQQ HQPLLVSLESLGRHTIQMLHDVLDAFARMDIDEAVRIYREDKKVDQEYEGIVRQLMTYMM EDSRTIPSVLTALFCARSIERIGDRCQNICEFIFYYVKGQDFRHVGGDELDKLLAEKDSD K >gi|299856450|gb|ADWV01000001.1| GENE 39 42029 - 42865 606 278 aa, chain + ## HITS:1 COG:bglG KEGG:ns NR:ns ## COG: bglG COG3711 # Protein_GI_number: 16131591 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli K12 # 1 278 1 278 278 523 99.0 1e-148 MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRPGERINSSGIEKEYALSSHELNGR LSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLL WDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLM REMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQA WQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH >gi|299856450|gb|ADWV01000001.1| GENE 40 42998 - 44875 1360 625 aa, chain + ## HITS:1 COG:bglF_2 KEGG:ns NR:ns ## COG: bglF_2 COG1263 # Protein_GI_number: 16131590 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 91 451 1 361 361 681 99.0 0 MTELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKNTPGIIMVVESGGQFQ VVIGNHVADVFLAVNSVAGLGEKAQQAPENDEKGNLLNRFVYVISGIFTPLIGLMAATGI LKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGA LVHPLILTAFENGQKADELGLDFLGIPVTLLNYSSSVIPIIFSAWLCSILERRLNAWLPS AIKNFFTPLLCLMVITPVTFLLVGPLSTWISELIAAGYLWLYQAVPAFAGAVMGGFWQIF VMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCERDAQKKVVAGSAA LTGLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVYSFGLPSIFTFMQTIP STGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPAQGAPQEKTPEVITPPEQGGIC SPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIASLFATLHAIGIESDD GVELLIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIREAGFDLTTPVLISNS DDFTDVLPHGTAQISAGEPLLSIIR >gi|299856450|gb|ADWV01000001.1| GENE 41 44894 - 46288 1235 464 aa, chain + ## HITS:1 COG:bglB KEGG:ns NR:ns ## COG: bglB COG2723 # Protein_GI_number: 16131589 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 464 1 464 470 978 99.0 0 MKAFPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAID FYHRYPEDIALFAEMGFTCLRISIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKP LVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRYQHKVALWLTFNEINMSLHEP FTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLPEAKIGNMLLGGLVYPLTCQPQD MLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYY MTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDSVGLRVLLNTLWDRYQKPLFIV ENGLGAKDSVEADGSIQDDYRIAYLNDHLVQVNEAIADGVDIMGYTSWGPIDLVSASHSQ MSKRYGFIYVDRDDNGEGSLTRTRKKSFGWYAEVIKTRGLSLKK >gi|299856450|gb|ADWV01000001.1| GENE 42 46374 - 47990 1543 538 aa, chain + ## HITS:1 COG:yieC KEGG:ns NR:ns ## COG: yieC COG4580 # Protein_GI_number: 16131588 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli K12 # 1 538 1 538 538 1016 99.0 0 MFRRNLITSAILLMAPLAFSAQSLAESLTVEHRLELLEKALRETQSELKKYKDEEKKKYT PATVNRSVSTNDQGYAANPFPTSSAAKPDAVLVKNEEKNASETGSIYSSMTLKDFSKFVK DEIGFSYNGYYRSGWGTASHGSPKSWAIGSLGRFGNEYSGWFDLQLKQRVYNENGKRVDA VVMMDGNVGQQYSTGWFGDNAGGENFMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEI QMLDWKTQRTDAAAGVGLENWKVGPGKIDIALVREDVDDYDRSLQNKQQINTNTIDLRYK DIPLWDKATLMVSGRYVTANESASEKDNQDNNGYYDWKDTWMFGTSLTQKFDKGGFNEFS FLVANNSIASNFGRYAGASPFTTFNGRYYGDHTGGTAVRLTSQGEAYIGDHFIVANAIVY SFGNDIYSYETGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGY KTTLFHTFKVNTSMLTSRPEIRFYATYIKALENELDGFTFEDNKDDQFAVGAQAEIWW >gi|299856450|gb|ADWV01000001.1| GENE 43 48017 - 49186 1117 389 aa, chain + ## HITS:1 COG:yieL KEGG:ns NR:ns ## COG: yieL COG2382 # Protein_GI_number: 16131587 # Func_class: P Inorganic ion transport and metabolism # Function: Enterochelin esterase and related enzymes # Organism: Escherichia coli K12 # 1 389 12 400 400 761 99.0 0 MNIKIAALTLAIASGISAQWAIAADMPASPAPTIPVKQYVTQVNADNSVTFRYFAPGAKN VSVVVGVPVPDNIHPMTKDEAGVWSWRTPILKGNLYEYFFNVDGVRSIDTGTAMTKPQRQ VNSSMILVPGSYLDTRSVAHGDLIAITYHSNALQSERQMYVWTPPGYTGMGEPLPVLYFY HGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVF YPLNAKAADRELMNDIIPLISKRFNVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLA TFSGVTTTTVPDECVAARLNDPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKIK FDYQEYPGLNHEMDVWRPAYAAFVQKLFK >gi|299856450|gb|ADWV01000001.1| GENE 44 49201 - 49923 786 240 aa, chain + ## HITS:1 COG:yieK KEGG:ns NR:ns ## COG: yieK COG0363 # Protein_GI_number: 16131586 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Escherichia coli K12 # 24 232 1 209 213 432 99.0 1e-121 MKLIITEDYQEMSRVAAHHLLGYMSKTRRVNLAITAGSTPKGMYEYLTTLVKGKPWYDNC YFYNFDEIPFRGKEGEGVTITNLRNLFFTPAGIKEENIQKLTIDNYREHDQKLAREGGLD LVVLGLGADGHFCGNLPNTTHFHEQTVEFPIQGEMVDIVAHGELGGDFSLVPDSYVTMGP KSIMAAKNLLIIVSGASKAQALKNVLQGPVTEDVPASVLQLHPSLMVIADKAAAAELALG >gi|299856450|gb|ADWV01000001.1| GENE 45 49985 - 50572 260 195 aa, chain - ## HITS:1 COG:yieJ KEGG:ns NR:ns ## COG: yieJ COG3196 # Protein_GI_number: 16131585 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 195 1 195 195 369 98.0 1e-102 MTQNIRPLPQFKYHPKPLETGAFEQDKTVECDCCEQQTSVYYSGPFYCVDEVEHLCPWCI ADGSAAEKFAGSFQDDASIEGVEFEYDEEDEFAGIKNTYPDEMLKELVERTPGYHGWQQE FWLAHCGDFCAFIGYVGWNDIKDRLDEFANLEEDCENFGIRNSDLAKCLQKRGDCQGYLF RCLHCGKLRLWGDFS >gi|299856450|gb|ADWV01000001.1| GENE 46 50621 - 51094 287 157 aa, chain - ## HITS:1 COG:no KEGG:SSON_3560 NR:ns ## KEGG: SSON_3560 # Name: yieI # Def: putative inner membrane protein # Organism: S.sonnei # Pathway: not_defined # 1 157 1 157 157 252 100.0 3e-66 MSVSRRVIHHGLYFAVLGPLIGVLFLVLYIFFAKEPLVLLVIIQVLPLFLLLSITTGAIP ALLTGVMVACLPEKIGSQKNYRCLAGGIGGVVITEIYCAVIVHIKGMASSELFENILSGD SLVVRIIPALLAGVVMSRIITRLPGLDISCPETDSLS >gi|299856450|gb|ADWV01000001.1| GENE 47 51161 - 51826 677 221 aa, chain - ## HITS:1 COG:yieH KEGG:ns NR:ns ## COG: yieH COG0637 # Protein_GI_number: 16131583 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli K12 # 1 221 1 221 221 466 99.0 1e-131 MSQIEAVFFDCDGTLVDSEVICSRAYVTMFQEFGITLDPEEVFKRFKGVKLYEIIDIVSL EHGVTLAKTEAEHVYRAEVARLFDSELEAIEGAGALLSAITAPMCVVSNGPNNKMQHSMG KLNMLHYFPDKLFSGYDIQRWKPDPALMFHAAKAMNVNVENCILVDDSVAGAQSGIDAGM EVFYFCADPHNKPIVHPKVTTFTHLSQLPELWKARGWDITA >gi|299856450|gb|ADWV01000001.1| GENE 48 51993 - 53330 1611 445 aa, chain + ## HITS:1 COG:STM3851 KEGG:ns NR:ns ## COG: STM3851 COG2252 # Protein_GI_number: 16767135 # Func_class: R General function prediction only # Function: Permeases # Organism: Salmonella typhimurium LT2 # 1 445 43 487 487 735 96.0 0 MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDT SAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVVVQAMGLPWQVGMGAIFWG AIGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMGLKNAGVIVANPETLVSIGNL TSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVV GHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSI SSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPGYAAAG ALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSITEGIALGFISYCVMKIGTGR LRDLSPCVIIVALMFILKIVFIDAH >gi|299856450|gb|ADWV01000001.1| GENE 49 53384 - 53950 803 188 aa, chain - ## HITS:1 COG:ECs4650 KEGG:ns NR:ns ## COG: ECs4650 COG0431 # Protein_GI_number: 15833904 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 364 100.0 1e-101 MSEKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFP ATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGV IGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQTGEVIDQGTLDHLTGQLTAFG EFIQRVKI >gi|299856450|gb|ADWV01000001.1| GENE 50 53972 - 54733 486 253 aa, chain - ## HITS:1 COG:yieE KEGG:ns NR:ns ## COG: yieE COG2091 # Protein_GI_number: 16131580 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Escherichia coli K12 # 1 253 1 253 253 517 99.0 1e-147 MERKMATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRGLLAELMFMLYGI GELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLDMELQRATRGFHSPH APDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLNDDPRDLQLLPIAGRLK CAHVNHVEALCDAEDVLVWSVAVTPTIEKLSVWEFDGKHGWKSLPDIHSRANNPTSRMMR FAQLSTVKAFSPN >gi|299856450|gb|ADWV01000001.1| GENE 51 54878 - 55837 766 319 aa, chain - ## HITS:1 COG:yidZ KEGG:ns NR:ns ## COG: yidZ COG0583 # Protein_GI_number: 16131579 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 319 1 319 319 584 99.0 1e-167 MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNSPL GLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKRIY QRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVP CVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQ SLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH NPKIVWLRETIKNLYASMA >gi|299856450|gb|ADWV01000001.1| GENE 52 55812 - 56987 820 391 aa, chain - ## HITS:1 COG:yidY KEGG:ns NR:ns ## COG: yidY COG0477 # Protein_GI_number: 16131578 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 391 1 391 391 660 99.0 0 MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGK VADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQGLGAGCCYVVAFAILRDTL DDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFWAMAMMGIAVLMLSLFILKE TRPASPAASDKPRENSESLLNRFFLSRVVITTLSVSVILTFVNTSPVLLMEIMGFERGEY ATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQVLFLAAGITLAVSPSHAVSLFGITL ICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVVGIGAWNMLIGI LIACSIVSLLLIMFVAPGRPVAAHEEIHHHA >gi|299856450|gb|ADWV01000001.1| GENE 53 57119 - 58366 1018 415 aa, chain - ## HITS:1 COG:tnaB KEGG:ns NR:ns ## COG: tnaB COG0814 # Protein_GI_number: 16131577 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli K12 # 1 415 1 415 415 731 99.0 0 MTDQAEKKHSAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAFILIIAWFSMLHSGLLL LEANLNYPVGSSFNTITKDLIGNTWNIISGITVAFVLYILTYAYISANGAIISETISMNL GYHANPRIVGICTAIFVASVLWISSLAASRITSLFLGLKIISFVIVFGSFFFQVDYSILR DATSTTAGTSYFPYIFMALPVCLASFGFHGNIPSLIICYGKRKDKLIKSVVFGSLLALVI YLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLGTKQHGIIEFCLLVFSNLAVASSFF GVTLGLFDYLADLFKIDNSHGGRFKTVLLTFLPPALLYLIFPNGFIYGIGGAGLCATIWA VIIPAVLAIKARKKFPNQMFTVWGGNLIPAIVILFGITVILCWFGNVFNVLPKFG >gi|299856450|gb|ADWV01000001.1| GENE 54 58457 - 59872 1937 471 aa, chain - ## HITS:1 COG:tnaA KEGG:ns NR:ns ## COG: tnaA COG3033 # Protein_GI_number: 16131576 # Func_class: E Amino acid transport and metabolism # Function: Tryptophanase # Organism: Escherichia coli K12 # 1 471 6 476 476 973 100.0 0 MENFKHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVT QSMQAAMMRGDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQE KGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGI EEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQ REAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVV QEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAA FVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRL TIPRATYTQTHMDFIIEAFKHVKENAANIKGLTFTYEPKVLRHFTAKLKEV >gi|299856450|gb|ADWV01000001.1| GENE 55 60410 - 61774 1536 454 aa, chain - ## HITS:1 COG:thdF KEGG:ns NR:ns ## COG: thdF COG0486 # Protein_GI_number: 16131574 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli K12 # 1 454 1 454 454 860 99.0 0 MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPRYADYLPFKDADGSVLD QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPGLRIARPGEFSERAFLNDK LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE IDFLSDGKIEAQLNDVIAELDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGMSEVNGHALIRLSAR TGEGVDVLRNHLKQSMGFDTNMEGGFLARRRHLQALEQAAEHLQQGKAQLLGAWAGELLA EELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK >gi|299856450|gb|ADWV01000001.1| GENE 56 61880 - 63526 1897 548 aa, chain - ## HITS:1 COG:ECs4640 KEGG:ns NR:ns ## COG: ECs4640 COG0706 # Protein_GI_number: 15833894 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Escherichia coli O157:H7 # 1 548 1 548 548 1064 100.0 0 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAGSAADQGVPASGQGKL ISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQFIYQAQSGLTGRDGP DNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNV QNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTIAD NENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAAIGYKSQPVLVQPGQT GAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIII ITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPL GGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYILPILMGVTMFFIQK MSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGL HSREKKKS >gi|299856450|gb|ADWV01000001.1| GENE 57 63750 - 64076 242 108 aa, chain - ## HITS:1 COG:rnpA KEGG:ns NR:ns ## COG: rnpA COG0594 # Protein_GI_number: 16131572 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Escherichia coli K12 # 1 108 12 119 119 190 99.0 5e-49 MLTPSQFTFVFQQPQRAGTPQITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRE SFRLRQHELPAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS >gi|299856450|gb|ADWV01000001.1| GENE 58 64126 - 64266 228 46 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15804297|ref|NP_290336.1| 50S ribosomal protein L34 [Escherichia coli O157:H7 EDL933] # 1 46 1 46 46 92 100 3e-17 MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK >gi|299856450|gb|ADWV01000001.1| GENE 59 64873 - 66276 1366 467 aa, chain + ## HITS:1 COG:dnaA KEGG:ns NR:ns ## COG: dnaA COG0593 # Protein_GI_number: 16131570 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Escherichia coli K12 # 1 467 1 467 467 931 100.0 0 MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNIN GLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVAQTQPQRAAPSTRSGWDNV PAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTH LLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFF ANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELE TRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVR EALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALAKELTNH SLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS >gi|299856450|gb|ADWV01000001.1| GENE 60 66281 - 67381 1278 366 aa, chain + ## HITS:1 COG:ECs4636 KEGG:ns NR:ns ## COG: ECs4636 COG0592 # Protein_GI_number: 15833890 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 726 99.0 0 MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALV QQHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLD DWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC SMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGR FPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQE EAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYV VMPMRL >gi|299856450|gb|ADWV01000001.1| GENE 61 67381 - 68454 825 357 aa, chain + ## HITS:1 COG:ECs4635 KEGG:ns NR:ns ## COG: ECs4635 COG1195 # Protein_GI_number: 15833889 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 357 1 357 357 712 100.0 0 MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV IRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPE GFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYEQLRPWDKE LIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNFER DRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL IDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKITD >gi|299856450|gb|ADWV01000001.1| GENE 62 68483 - 70897 3114 804 aa, chain + ## HITS:1 COG:ECs4634 KEGG:ns NR:ns ## COG: ECs4634 COG0187 # Protein_GI_number: 15833888 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Escherichia coli O157:H7 # 1 804 1 804 804 1588 100.0 0 MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEII VTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV SVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVT EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY LLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG KQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERR YPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLF EPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFE QALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTL MGDAVEPRRAFIEENALKAANIDI >gi|299856450|gb|ADWV01000001.1| GENE 63 71137 - 71535 555 132 aa, chain + ## HITS:1 COG:ECs4633 KEGG:ns NR:ns ## COG: ECs4633 COG3753 # Protein_GI_number: 15833887 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 132 4 135 135 214 98.0 4e-56 MGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQGNQS VSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVSPQANNDLLS AGMELLKGKLFR >gi|299856450|gb|ADWV01000001.1| GENE 64 71650 - 72462 1167 270 aa, chain + ## HITS:1 COG:yidA KEGG:ns NR:ns ## COG: yidA COG0561 # Protein_GI_number: 16131565 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 1 270 1 270 270 523 99.0 1e-148 MAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME LPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANR DISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTV LKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAMDNA IPSVKEVANFVTKSNLEDGVAFAIEKYVLN >gi|299856450|gb|ADWV01000001.1| GENE 65 72508 - 73164 290 218 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_4205 NR:ns ## KEGG: EcE24377A_4205 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 218 36 253 253 442 99.0 1e-123 MKLNFKGFFKAAGLFPLALMLSGCISYALVSHTAKGSSGKYQSQSDTITGLSQAKDSNGT KGYVFVGESLDYLITDGADDIVKMLNDPALNRHNIQVADDARFVLNAGKKKFTGTISLYY YWNNEEEKALATHYGFACGVQHCTRSLENLKGTIHEKNKNMDYSKVMAFYHPFKVRFYEY YSPRGIPDGVSAALLPVTVTLDIITAPLQFLVVYAVNQ >gi|299856450|gb|ADWV01000001.1| GENE 66 73442 - 74131 650 229 aa, chain + ## HITS:1 COG:STM3830 KEGG:ns NR:ns ## COG: STM3830 COG2186 # Protein_GI_number: 16767115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 409 94.0 1e-114 MTLNKTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNIIREVFRSLMAKRLIEM KRYRGAFVAPRNQWNYLDTDVLQWVLENDYDPRLISAMSEVRNLVEPAIARWAAERATSS DLAQIESALNEMIANNQDREAFNEADIRYHEAVLQSVHNPVLQQLSIAISSLQRAVFERT WMGDEANMPQTLQEHKALFDAIRHQDGDAAEQAALTMIASSTRRLKEIT >gi|299856450|gb|ADWV01000001.1| GENE 67 74128 - 75006 530 292 aa, chain + ## HITS:1 COG:dgoK KEGG:ns NR:ns ## COG: dgoK COG3734 # Protein_GI_number: 16131561 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-galactonokinase # Organism: Escherichia coli K12 # 1 292 1 292 292 544 97.0 1e-155 MTARYIAIDWGSTNLRAWLYQGDHCLESRQSEAGVTRLNGKSPAAVLAEVTTDWREENTP VVMAGMVGSNVGWKVAPYLSVPARFSSIGEQLTSVGDNIWIIPGLCVSHDDNHNVMRGEE TQLIGARTLAPSSLYVMPGTHCKWVQADSQQINDFRTVMTGELHHLLLNHSLIGAGLPPQ ENSADAFAAGLERGLNAPAILPQLFEVRASHVLGTLPREQVSEFLSGLLIGAEVASMRDY VTHQHAITLVAGTSLTARYQQAFQAMGCDVTAVAGDTAFQAGIRSIAHAVAN >gi|299856450|gb|ADWV01000001.1| GENE 68 74990 - 75607 558 205 aa, chain + ## HITS:1 COG:RSc2752 KEGG:ns NR:ns ## COG: RSc2752 COG0800 # Protein_GI_number: 17547471 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Ralstonia solanacearum # 1 201 3 203 213 239 62.0 3e-63 MQWQTKLPLIAILRGIKPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKA LIGAGTVLKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALEA GAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLY RAGQSVERTAQQAAAFVKAYREAVQ >gi|299856450|gb|ADWV01000001.1| GENE 69 75604 - 76752 1612 382 aa, chain + ## HITS:1 COG:dgoA_2 KEGG:ns NR:ns ## COG: dgoA_2 COG4948 # Protein_GI_number: 16131560 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 382 96 477 477 799 100.0 0 MKITKITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAAVHELGDYLIGQDPSRI NDLWQVMYRAGFYRGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWV GGDRPADVIDGIKTLREIGFDTFKLNGCEELGLIDNSRAVDAAVNTVAQIREAFGNQIEF GLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPKLAAQTHIPLAAGERMFSR FDFKRVLEAGGISILQPDLSHAGGITECYKIAGMAEAYDVTLAPHCPLGPIALAACLHID FVSYNAVLQEQSMGIHYNKGAELLDFVKNKEDFSMVGGFFKPLTKPGLGVEIDEAKVIEF SKNAPDWRNPLWRHEDNSVAEW >gi|299856450|gb|ADWV01000001.1| GENE 70 76872 - 78164 1412 430 aa, chain + ## HITS:1 COG:dgoT KEGG:ns NR:ns ## COG: dgoT COG0477 # Protein_GI_number: 16131559 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 430 16 445 445 800 99.0 0 MDIPVNAAKPGRRRYLTLVMIFITVVICYVDRANLAVASAHIQEEFGITKAEMGYVFSAF AWLYTLCQIPGGWFLDRLGSRVTYFIAIFGWSVATLFQGFATGLMSLIGLRAITGIFEAP AFPTNNRMVTSWFPEHERASAVGFYTSGQFVGLAFLTPLLIWIQEMLSWHWVFIVTGGIG IIWSLIWFKVYQPPRLTKGISKAELDYIRDGGGLVDGDAPVKKEARQPLTAKDWKLVFHR KLIGVYLGQFAVASTLWFFLTWFPNYLTQEKGITALKAGFMTTVPFLAAFVGVLLSGWVA DLLVRKGFSLGFARKTPIICGLLISTCIMGANYTNDPMMIMCLMALAFFGNGFASITWSL VSSLAPMRLIGLTGGVFNFAGGLGGITVPLVVGYLAQGYGFAPALVYISAVALIGALSYI LLVGDVKRVG >gi|299856450|gb|ADWV01000001.1| GENE 71 78161 - 79225 628 354 aa, chain - ## HITS:1 COG:yidS KEGG:ns NR:ns ## COG: yidS COG0644 # Protein_GI_number: 16131558 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli K12 # 1 354 8 361 361 740 98.0 0 MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDAQRSFIR DGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIPTSVEVYHD SLCRNIWREDDKWHVIFRADGWEQHITARYLVGADGANSMVRRHLYPDHQIRKYVAIQQW FAEKHPVPFYSCIFDNSITNCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQ FGKAVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSADILRAVL LKQPEKLNTAYWRATRKLRLKLFGKIVKSRCLTAPALRKWIMRSGMAHIPQLKD >gi|299856450|gb|ADWV01000001.1| GENE 72 79326 - 80540 1023 404 aa, chain + ## HITS:1 COG:no KEGG:ECSE_3975 NR:ns ## KEGG: ECSE_3975 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 404 13 416 416 817 100.0 0 MKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQ GAHVGVVTVHPKSEKYVFIHGPENPDETWHYDFHHRRGVIAEGGKVSNLDAMDITAPYTP GALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQHPREYS GSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPQ DEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQI AFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQ SGEVEYLTENHANPPSADAVVFSPDGQWLAWMEGGQLWITETDR >gi|299856450|gb|ADWV01000001.1| GENE 73 80542 - 80805 291 87 aa, chain - ## HITS:1 COG:ECs4628 KEGG:ns NR:ns ## COG: ECs4628 COG5645 # Protein_GI_number: 15833882 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli O157:H7 # 1 87 49 135 135 167 98.0 5e-42 MMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRKDSS VRSRVEKSEANAQATNAVIPPARMPDN >gi|299856450|gb|ADWV01000001.1| GENE 74 81180 - 81593 586 137 aa, chain + ## HITS:1 COG:ECs4627 KEGG:ns NR:ns ## COG: ECs4627 COG0071 # Protein_GI_number: 15833881 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 256 100.0 7e-69 MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDENHYRIAIAVAGFAESE LEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVRGANLVNGLLYID LERVIPEAKKPRRIEIN >gi|299856450|gb|ADWV01000001.1| GENE 75 81705 - 82133 549 142 aa, chain + ## HITS:1 COG:ECs4626 KEGG:ns NR:ns ## COG: ECs4626 COG0071 # Protein_GI_number: 15833880 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Escherichia coli O157:H7 # 1 142 3 144 144 275 100.0 2e-74 MRNFDLSPLMRQWIGFDKLANALQNAGESQSFPPYNIEKSDDNHYRITLALAGFRQEDLE IQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAENMEVSGATFVNGLLHIDLI RNEPEPIAAQRIAISERPALNS >gi|299856450|gb|ADWV01000001.1| GENE 76 82330 - 83991 1945 553 aa, chain + ## HITS:1 COG:ECs4625 KEGG:ns NR:ns ## COG: ECs4625 COG2985 # Protein_GI_number: 15833879 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 553 9 561 561 985 100.0 0 MSDIALTVSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVGHFVSQAGMTLSSDMLH VIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVIIGGLVTAILHKLFDIPLP VVLGIFSGAVTNTPALGAGQQILRDLGTPMEMVDQMGMSYAMAYPFGICGILFTMWMLRV IFRVNVETEAQQHESSRTNGGALIKTINIRVENPNLHDLAIKDVPILNGDKIICSRLKRE ETLKVPSPDTIIQLGDLLHLVGQPADLHNAQLVIGQEVDTSLSTKGTDLRVERVVVTNEN VLGKRIRDLHFKERYDVVISRLNRAGVELVASGDISLQFGDILNLVGRPSAIDAVANVLG NAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVPGFPAALKLGLAGGPLIMALILGRIGSIG KLYWFMPPSANLALRELGIVLFLSVVGLKSGGDFVNTLVNGEGLSWIGYGALITAVPLIT VGILARMLAKMNYLTMCGMLAGSMTDPPALAFANNLHPTSGAAALSYATVYPLVMFLRII TPQLLAVLFWSIG >gi|299856450|gb|ADWV01000001.1| GENE 77 83988 - 84704 628 238 aa, chain - ## HITS:1 COG:ECs4624 KEGG:ns NR:ns ## COG: ECs4624 COG2188 # Protein_GI_number: 15833878 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 445 98.0 1e-125 MIYKSIAERLRIRLNYADFTLNSLLPGEKKLAEEFAVSRMTIRKAIDLLVAWGLVVRRHG SGTYLVRKDVLHQTASLTGLVEVLKRQGKTVTSQVLIFEIMPAPPAIASQLRIQINEQIY FSRRVRFVEGKPLMLEDSYMPVKLFRNLSLQHLEGSKFEYIGQECGILIGGNYESLTPVL ADRLLARQMKVAEHTPLLRITSLSYSESGEFLNYSVMFRNASEYQVEYHLRRLHPEKS >gi|299856450|gb|ADWV01000001.1| GENE 78 85000 - 86616 1774 538 aa, chain + ## HITS:1 COG:glvCm_1 KEGG:ns NR:ns ## COG: glvCm_1 COG1263 # Protein_GI_number: 16132269 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 447 88 534 534 844 99.0 0 MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTDPNSLFAQIVHIIEEGG WTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFINAMGMTWGSYFGVDFTQD AVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDKKLPVFLGIFQGTSYVVIIAF LVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVWVYTFLERILIPTGLHHFIYGPFI FGLAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGGFALHGNSKIFGAVGISLAMYFTAA PENRVKVAGLLIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVLAASMSTVMYLFGVVG NMGGGLIDQVLPQNWIPMFSNHADMMLTQIAIGLCFTLLYFVVFRTLILQFNMCTPGRED AEVKLYSKAEYKASRGQTTAAEPKKELDQAAGILQALGGVGNISSINNCATRLRIALHDM SQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLHEQLDSLINSHQSAENVAITEAV >gi|299856450|gb|ADWV01000001.1| GENE 79 86616 - 87254 562 212 aa, chain + ## HITS:1 COG:glvG KEGG:ns NR:ns ## COG: glvG COG1486 # Protein_GI_number: 16131551 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli K12 # 1 212 1 212 212 443 99.0 1e-124 MTKFSVVVAGGGSTFTPGIVLMLLANQERFPLRALKFYDNDGARQEVIAEACKVILKEKA PDIAFSYTTDPEVAFSDVDFVMAHIRVGKYPMRELDEKIPLRHGVVGQETCGPGGIAYGM RSIGGVLELVDYMEKYSPNAWMLNYSNPAAIVAEATRRLRPNAKILNICDMPIGIESRMA QIVGLQDRKQMRVRYYGLNHWWSAISRSFRKG >gi|299856450|gb|ADWV01000001.1| GENE 80 87218 - 87430 231 70 aa, chain + ## HITS:1 COG:Z5177 KEGG:ns NR:ns ## COG: Z5177 COG1486 # Protein_GI_number: 15804281 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 EDL933 # 1 70 371 440 440 141 98.0 4e-34 MVGDIPQFQKGLMSQQVAVEKLVVDAWEQRSYQHLWQAITLSKTVPSASVAKAILDELLE ANKAYWPELR >gi|299856450|gb|ADWV01000001.1| GENE 81 87427 - 88320 601 297 aa, chain - ## HITS:1 COG:yidL KEGG:ns NR:ns ## COG: yidL COG2207 # Protein_GI_number: 16131550 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 297 11 307 307 624 100.0 1e-179 MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIAN SWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMM DIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKD PQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN >gi|299856450|gb|ADWV01000001.1| GENE 82 88481 - 90196 1721 571 aa, chain + ## HITS:1 COG:yidK KEGG:ns NR:ns ## COG: yidK COG4146 # Protein_GI_number: 16131549 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Escherichia coli K12 # 1 571 1 571 571 1050 99.0 0 MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQ LVGLSGQAYKSGMSVMGWEVTSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRII IDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHGAAIWLLVILLGLAGILYAVI GGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQLTTVHAEKLNSIGGPTD PLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPG LIAFHLYQDLPKADMAYPTLVNNVLPVPMVGFFGAVLFGAVISTFNGFLNSASTLFSMGI YRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAPQGLYSWMKQLNGIYNVPLVT IIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGF IKPRATPFTFKDAFAVDMKPWRNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFI AAVVIVYLIFDSWRHRHDPAVTFTPDAKDSL >gi|299856450|gb|ADWV01000001.1| GENE 83 90193 - 91686 1127 497 aa, chain + ## HITS:1 COG:yidJ KEGG:ns NR:ns ## COG: yidJ COG3119 # Protein_GI_number: 16131548 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Escherichia coli K12 # 1 497 1 497 497 1044 99.0 0 MKRPNFLFIMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLF TGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDA DYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARA EEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYDLGEKAQDDLANKPEHHRLWAQAMPSPV GDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAA MYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRG VMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIRF ADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDALPRWMGAFRPRPQDGYSPVVRDYD TGLPTQGVKVEEKKQKF >gi|299856450|gb|ADWV01000001.1| GENE 84 91733 - 92143 360 136 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4146 NR:ns ## KEGG: EC55989_4146 # Name: yidI # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.coli_55989 # Pathway: not_defined # 1 136 14 149 149 217 100.0 1e-55 MLFGAIALMMGIIHFSFGPFSAPPPTFESIVADKTAEIKRGLLAGIKGEKITTVEKKEDV DVDKILDQSGIALAIAALLCAFIGGMRKENRWGIRGALVFGGGTLAFHTLLFGIGIVCSI LLIFLIFSFLTGGSLV >gi|299856450|gb|ADWV01000001.1| GENE 85 92292 - 92639 484 115 aa, chain + ## HITS:1 COG:ECs4617 KEGG:ns NR:ns ## COG: ECs4617 COG2149 # Protein_GI_number: 15833871 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 115 1 115 115 190 100.0 7e-49 MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPVIRELLALLLC LFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMVVAVIVMGLVLYAG >gi|299856450|gb|ADWV01000001.1| GENE 86 92629 - 92991 261 120 aa, chain + ## HITS:1 COG:no KEGG:ECO111_4500 NR:ns ## KEGG: ECO111_4500 # Name: yidG # Def: putative inner membrane protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 120 1 120 120 221 100.0 8e-57 MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWHQAGMLFWISIGILAIV ALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAILFAVTHIHQLIVFIERVA >gi|299856450|gb|ADWV01000001.1| GENE 87 92988 - 93485 391 165 aa, chain + ## HITS:1 COG:yidF KEGG:ns NR:ns ## COG: yidF COG0641 # Protein_GI_number: 16131544 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Escherichia coli K12 # 1 165 1 165 165 339 99.0 1e-93 MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLIPYLEFDDRGDLTAASV TAELWGKFLIALFECWVRADISRISIELFDATLQKWCGSENPQPRRDCQACDWHRLCPHA RQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMELMTMLR >gi|299856450|gb|ADWV01000001.1| GENE 88 93493 - 94644 1257 383 aa, chain - ## HITS:1 COG:ECs4614 KEGG:ns NR:ns ## COG: ECs4614 COG0477 # Protein_GI_number: 15833868 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 9 383 22 396 396 619 100.0 1e-177 MLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVG RRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLR HANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDA PRTRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFIL PIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFF GAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTL MGLLIVLCWLPLATRMSHQGQPV >gi|299856450|gb|ADWV01000001.1| GENE 89 95096 - 95185 125 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLVDIAILILKLIVAALQLLDAVLKYLK >gi|299856450|gb|ADWV01000001.1| GENE 90 95953 - 97641 1937 562 aa, chain + ## HITS:1 COG:ECs4612 KEGG:ns NR:ns ## COG: ECs4612 COG0028 # Protein_GI_number: 15833866 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 562 1 562 562 1099 98.0 0 MASSGTTLTRKRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYDALSQSTQIRHILARHE QGAGFIAQGMARTDGKPAVCMACSGPGATNLVTAIADARLDSIPLICITGQVPASMIGTD AFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQSGRPGPVWIDIPKDVQTAVFE IETQPAMAEKAAAPAFSEESIRDAAAMINAAKRPVLYLGGGVINAPARVRELAEKAQLPT TMTLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEADLLIVLGARFDDRAIGKTEQFCPN AKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQLIPQVEAQPRAEWHQLVADLQREFPCP IPKACDPLSHYGLINAVAACVDDNAIITTDVGQHQMWTAQAYPLNRPRQWLTSGGLGTMG FGLPAAIGAALANPDRKVLCFSGDGSLMMNIQEMATASENQLDVKIILMNNEALGLVHQQ QSLFYEQGVFAATYPGKINFMQIAAGFGLETCDLNNEADPQAALQEIINRPGPALIHVRI DAEEKVYPMVPPGAANTEMVGE >gi|299856450|gb|ADWV01000001.1| GENE 91 97645 - 97935 370 96 aa, chain + ## HITS:1 COG:ECs4611 KEGG:ns NR:ns ## COG: ECs4611 COG0440 # Protein_GI_number: 15833865 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 184 100.0 3e-47 MQNTTHDNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPIQDSDKSHIWLLVNDDQ RLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ >gi|299856450|gb|ADWV01000001.1| GENE 92 98010 - 98600 814 196 aa, chain + ## HITS:1 COG:ECs4606 KEGG:ns NR:ns ## COG: ECs4606 COG2197 # Protein_GI_number: 15833860 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 375 100.0 1e-104 MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDI SGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGC YLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKL GVSNDVELARRMFDGW >gi|299856450|gb|ADWV01000001.1| GENE 93 98711 - 100102 1323 463 aa, chain + ## HITS:1 COG:uhpB KEGG:ns NR:ns ## COG: uhpB COG3851 # Protein_GI_number: 16131538 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, glucose-6-phosphate specific # Organism: Escherichia coli K12 # 1 463 39 501 501 772 99.0 0 MAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPV ALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLV FWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLAL PIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLR ELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADN ASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLSLEQAIRSLMREMELEGRGIVSHL EWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLP PGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV >gi|299856450|gb|ADWV01000001.1| GENE 94 100112 - 101431 1318 439 aa, chain + ## HITS:1 COG:ECs4604 KEGG:ns NR:ns ## COG: ECs4604 COG2271 # Protein_GI_number: 15833858 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli O157:H7 # 1 439 2 440 440 809 99.0 0 MLPFLKAPADAPLMTDKHEIDARYRYWRRHILLTIWLGYALFYFTRKSFNAAVPEILANG VLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSTSLWA FAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWNTAHNVGGALIPIVMAAAALH YGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVGEWRHDALEIAQQQEGAGLTRKE ILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLYMSETLGVDLVTANTAVTMFELGGF IGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQATCFFTIGFFVFG PQMLIGMAAAECSHKEAAGAATGFVGLFAYLGASLAGWPLAKVLDTWHWSGFFVVISIAA GISALLLLPFLNAQAPREA >gi|299856450|gb|ADWV01000001.1| GENE 95 101569 - 102960 1784 463 aa, chain + ## HITS:1 COG:ECs4603 KEGG:ns NR:ns ## COG: ECs4603 COG2271 # Protein_GI_number: 15833857 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 845 100.0 0 MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMISTY GLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFMLILSAICMLGFSASMGSGS VSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTFLGFWNISHNLGGAGAAGVAL FGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPESYGLGKAEELFGEEISEEDKET ESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRIGIDQWSTVYAFQELKLSKAVAIQG FTLFEAGALVGTLLWGWLSDLANGRRGLVACIALALIIATLGVYQHASNEYIYLASLFAL GFLVFGPQLLIGVAAVGFVPKKAIGAADGIKGTFAYLIGDSFAKLGLGMIADGTPVFGLT GWAGTFAALDIAAIGCICLMAIVAVMEERKIRREKKIQQLTVA >gi|299856450|gb|ADWV01000001.1| GENE 96 103005 - 104771 1535 588 aa, chain - ## HITS:1 COG:yicP KEGG:ns NR:ns ## COG: yicP COG1001 # Protein_GI_number: 16131535 # Func_class: F Nucleotide transport and metabolism # Function: Adenine deaminase # Organism: Escherichia coli K12 # 1 588 1 588 588 1198 99.0 0 MNNSINHKFHHISRAEYQELLAVSRGDAVADYIIDNVSILDLINGGEISGPIVIKGRYIA GVGAEYADAPALQRIDARGATAVPGFIDAHLHIESSMMTPVTFETATLPRGLTTVICDPH EIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQV TGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGLGGKELNAYITAGIENCHESYQL EEGRRKLQLGMSLMIREGSAARNLNALAPLINEFNSPQCMLCTDDRNPWEIAHEGHIDAL IRRLIEQHNVPLHVAYRVASWSTARHFGLNHLGLLAPGKQADIVLLSDARKVTVQQVLVK GEPIDAQTLQAEESARLAQSAPPYGNTIARQPVSASDFALQFTPGKRYRVIDVIHNELIT HSHSSVYSENGFDRDDVSFIAVLERYGQRLAPACGLLGGFGLNEGALAATVSHDSHNIVV IGRSAEEMALAVNQVIQDGGGLCVVRNGQVQSHLPLPIAGLMSTDTAQSLAEQIDALKAA ARECGPLPDEPFIQMAFLSLPVIPALKLTSQGLFDGEKFAFTTLEVTE >gi|299856450|gb|ADWV01000001.1| GENE 97 104934 - 106280 1280 448 aa, chain + ## HITS:1 COG:yicO KEGG:ns NR:ns ## COG: yicO COG2252 # Protein_GI_number: 16131534 # Func_class: R General function prediction only # Function: Permeases # Organism: Escherichia coli K12 # 1 448 23 470 470 765 99.0 0 MDKKMNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGA AQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMG AIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLV MIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPD ISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKAL YVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPP YATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMK VCTGRWRDLNLCVVVVAALFALKIILVD >gi|299856450|gb|ADWV01000001.1| GENE 98 106333 - 106785 405 150 aa, chain + ## HITS:1 COG:no KEGG:APECO1_2789 NR:ns ## KEGG: APECO1_2789 # Name: yicN # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 150 10 159 159 290 100.0 9e-78 MIWIMLATLAVVFVVGFRVLTSGARKAIRRLSDRLNIDVVPVESMVDQMGKSAGDEFLRY LHRPDESHLQNAAQVLLIWQIVIVDGSEQNLLQWHRILQKARLAAPITDAQVRLALGFLR ETEPEMQDINAFQMRYNAFFQPAEGVHWLH >gi|299856450|gb|ADWV01000001.1| GENE 99 106996 - 108186 1140 396 aa, chain + ## HITS:1 COG:yicM KEGG:ns NR:ns ## COG: yicM COG2814 # Protein_GI_number: 16131532 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 396 56 451 451 667 100.0 0 MSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQS VTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGL ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAA AVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIR PVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTL WGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIG GYALDNIGLTSPLMLSGTLMLLTALLVTAKVKMKKS >gi|299856450|gb|ADWV01000001.1| GENE 100 108227 - 108520 273 97 aa, chain - ## HITS:1 COG:no KEGG:SSON_3614 NR:ns ## KEGG: SSON_3614 # Name: not_defined # Def: putative transport protein # Organism: S.sonnei # Pathway: not_defined # 1 97 1 97 97 187 100.0 9e-47 MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLM LSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM >gi|299856450|gb|ADWV01000001.1| GENE 101 108742 - 109560 716 272 aa, chain + ## HITS:1 COG:nlpA KEGG:ns NR:ns ## COG: nlpA COG1464 # Protein_GI_number: 16131531 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli K12 # 1 272 1 272 272 497 98.0 1e-141 MKLTTHHLRAGAALLLAGILLAGCDQSGSDTKHIKVGVINGAEQDVAEVAKKVAKEKYGL DVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSK KIKSVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQI MELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKN AENVKEFLQSYQSPEVAKAAETIFNGGAVPGW >gi|299856450|gb|ADWV01000001.1| GENE 102 109564 - 110487 657 307 aa, chain - ## HITS:1 COG:yicL KEGG:ns NR:ns ## COG: yicL COG0697 # Protein_GI_number: 16131530 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 307 1 307 307 498 99.0 1e-141 MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGD KIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLV RKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLI ARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGA QLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARKI NRPARHE >gi|299856450|gb|ADWV01000001.1| GENE 103 110598 - 111782 617 394 aa, chain - ## HITS:1 COG:setC KEGG:ns NR:ns ## COG: setC COG0477 # Protein_GI_number: 16131529 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 394 1 394 394 706 99.0 0 MQKTATTPSKILDLTAAAFLLVAFLTGIAGALQTPTLSIFLADELKARPIMVGFFFTGSA IMGILVSQFLARHSDKQGDRKLLILLCCLFGVLACTLFAWNRNYFILLSTGVLLSSFAST ANPQMFALAREHADRTGRETVMFSTFLRAQISLAWVIGPPLAYELAMGFSFKVMYLTAAI AFVVCGLIVWLFLPSIQRNIPVVTQPVEILPSTHRKRDTRLLFVVCSMMWAANNLYMINM PLFIIDELHLTDKLAGEMIGIAAGLEIPMMLIAGYYMKRIGKRLLMLIAIVSGMCFYASV LMATTPAVELELQILNAIFLGILCGIGMLYFQDLMPEKIGSATTLYANTSRVGWIIAGSV DGIMVEIWSYHALFCLAIGMLGIAMICLLFIKDI >gi|299856450|gb|ADWV01000001.1| GENE 104 112806 - 114188 1221 460 aa, chain + ## HITS:1 COG:yicJ KEGG:ns NR:ns ## COG: yicJ COG2211 # Protein_GI_number: 16131528 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli K12 # 1 460 20 479 479 877 100.0 0 MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAI SDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLT LLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPL GFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFN ILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTN ALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTG ISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSATISIIIALFTIVPAICYLLS AIIAKRYYSLTTHNLKTVMEQLAQGKRRCQQQFTSQEVQN >gi|299856450|gb|ADWV01000001.1| GENE 105 114198 - 116516 2137 772 aa, chain + ## HITS:1 COG:yicI KEGG:ns NR:ns ## COG: yicI COG1501 # Protein_GI_number: 16131527 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Escherichia coli K12 # 1 772 1 772 772 1639 99.0 0 MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRERTWQLDTPLFTLRFFSP QEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSL DFLSNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVE TWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYF VIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPL HVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSPVFKEL QEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGER IPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWG GDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH GSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPA CDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHSFLSLP IYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPATDGSVIFTLKAARTG NTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL >gi|299856450|gb|ADWV01000001.1| GENE 106 116569 - 118278 1404 569 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4502 NR:ns ## KEGG: ECO103_4502 # Name: yicH # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 569 1 569 569 1077 100.0 0 MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPS HIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFK ADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVLGTKAQIQFSAGSLSLNDVPA TNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTD FFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASE FIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLE YTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTD HKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ TPQRQTHISLNGRGVPVNILQQWGWPKLPLTGDGNIQLTASGDIQANVPLKPTVSGQLHA VNAAKQQVTQTMNAGIVSSGEVTSTEPVR >gi|299856450|gb|ADWV01000001.1| GENE 107 118399 - 119790 1749 463 aa, chain - ## HITS:1 COG:ECs4530 KEGG:ns NR:ns ## COG: ECs4530 COG2233 # Protein_GI_number: 15833784 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 785 100.0 0 MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLLAMFVAVITPALLICQA LGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQGTSFNFVAPLIMGGTALKT GGADVPTMMAALFGTLMLASCTEMVISRVLHLARRIITPLVSGVVVMIIGLSLIQVGLTS IGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNPYLRVASLVIAMAAGYALAWFMG MLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLMLVFMITSLETIGDITATSDVSEQPV SGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLI VLGLFPAVSGFVQHIPEPVLGGATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGL GVSQQPLILQFAPEWLKNLLSSGIAAGGITAIVLNLIFPPEKQ >gi|299856450|gb|ADWV01000001.1| GENE 108 120070 - 121275 1440 401 aa, chain + ## HITS:1 COG:ECs4529 KEGG:ns NR:ns ## COG: ECs4529 COG0786 # Protein_GI_number: 15833783 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Escherichia coli O157:H7 # 1 401 1 401 401 619 100.0 1e-177 MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLLVALALLVLKKSMGWEV NFDMSLRDPLMLAFFATIGLNANIASLRAGGRVVGIFLIVVVGLLVMQNAIGIGMASLLG LDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEVAMACATFGLVLGGLIGGPVA RYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLIETIALIAICLTVGKIVAQLLAG TAFELPTFVCVLFVGVILSNGLSMMGFYRVFERAVSVLGNVSLSLFLAMALMGLKLWELA SLALPMLAILVVQTIFMALYAIFVTWRMMGKNYDAAVLAAGHCGFGLGATPTAIANMQAI TERFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLMLPIFAG >gi|299856450|gb|ADWV01000001.1| GENE 109 121278 - 122144 659 288 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_4155 NR:ns ## KEGG: EcE24377A_4155 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 288 1 288 288 580 100.0 1e-164 MKKRRKEPETLREHCRHIFGDEPPVLCVWETEFDYADAELKALAAKEWQQISERDLSAYY VLNLVYNEPMQIELFRYLFPLCLAQWHETVLAGGYGDHFEESLMKALCRPYLWQEMMNAS QRQQVRQFLLDTALQRMDNERGFNNVLCWLAVFNTLGGAAPLIRSLWSRWWALDTPGKAV CAIQYAAHLIYPIEANPLWSQEWIGWGHPLGHKDGWSSDNRAFLRQMLTPEMIVAGVQAA AEILRGEPEGAMAARIAQDAYEAMDILTIQIEDLLRDLSCDESGHALE >gi|299856450|gb|ADWV01000001.1| GENE 110 122129 - 124210 2158 693 aa, chain - ## HITS:1 COG:ZrecG KEGG:ns NR:ns ## COG: ZrecG COG1200 # Protein_GI_number: 15804193 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Escherichia coli O157:H7 EDL933 # 1 693 12 704 704 1316 99.0 0 MKGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRYEDRTHLYPIGELLPGV YATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFSAAMKNSLATGRRVLAYGEAK RGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALDLLDTCAIE ELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQHPAQRRLILEELLAHNLSMLALR AGAQRFHAQPLSANDALKNKLLAALPFKPTGAQARVVAEIERDMALDVPMMRLVQGDVGS GKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFEPLGIEVGWLAGKQKGKAR LSQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFH PHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRTDIIDRVRHACI TEGRQAYWVCTLIEESELLEAQAAEATWEELKLALPELNVGLVHGRMKPAEKQAVMASFK QGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKT PLSKTAQIRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPE VQRLARHIHERYPQQAKALIERWMPETERYSNA >gi|299856450|gb|ADWV01000001.1| GENE 111 124216 - 124905 596 229 aa, chain - ## HITS:1 COG:ECs4526 KEGG:ns NR:ns ## COG: ECs4526 COG0566 # Protein_GI_number: 15833780 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 446 99.0 1e-125 MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTM ASAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDNAVDFREIDYTRPTCILMGQ EKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPE AEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG >gi|299856450|gb|ADWV01000001.1| GENE 112 124912 - 127020 2096 702 aa, chain - ## HITS:1 COG:ECs4525 KEGG:ns NR:ns ## COG: ECs4525 COG0317 # Protein_GI_number: 15833779 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Escherichia coli O157:H7 # 1 702 1 702 702 1414 100.0 0 MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMK LDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFR KMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKT ELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHL YSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKA NGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQ SLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHA CVGARVDRQPYPLSQPLTSGQTVEIITAPGARPNAAWLNFVVSSKARAKIRQLLKNLKRD DSVSLGRRLLNHALGGSRKLNEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKN LQHGDASIPPATQSHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCR NIRGYQKEPEKFMAVEWDKETAQEFITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTE EKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRNRN >gi|299856450|gb|ADWV01000001.1| GENE 113 127039 - 127314 506 91 aa, chain - ## HITS:1 COG:ECs4524 KEGG:ns NR:ns ## COG: ECs4524 COG1758 # Protein_GI_number: 15833778 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Escherichia coli O157:H7 # 1 91 1 91 91 112 100.0 2e-25 MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIN NQILDVRERQEQQEQEAAELQAVTAIAEGRR >gi|299856450|gb|ADWV01000001.1| GENE 114 127369 - 127992 564 207 aa, chain - ## HITS:1 COG:gmk KEGG:ns NR:ns ## COG: gmk COG0194 # Protein_GI_number: 16131519 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Escherichia coli K12 # 1 207 1 207 207 398 100.0 1e-111 MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHD EFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARS IFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLK TIIRAERLRMSRQKQRHDALISKLLAD >gi|299856450|gb|ADWV01000001.1| GENE 115 128132 - 128389 78 85 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_5019 NR:ns ## KEGG: ECH74115_5019 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 85 1 85 85 169 100.0 4e-41 MIYCNKDDSQEASSQTPFLPLGFAFTTLYICQPDYSGGEDESMDGDINKYLVLAIICVGG LSGLVASQSTGRNFPPATANKTVGR >gi|299856450|gb|ADWV01000001.1| GENE 116 128250 - 129932 964 560 aa, chain + ## HITS:1 COG:ECs4522 KEGG:ns NR:ns ## COG: ECs4522 COG0272 # Protein_GI_number: 15833776 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Escherichia coli O157:H7 # 1 560 3 562 562 1051 98.0 0 MKVWMAILISILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGV YDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLW VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGE IFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMTDRLKELA TAGFTLTQRYTRAVKNADEVARVRNEWWKAKLPFVTDGVVVRGAKEPESRHWLPGQAEWL VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWEEWDIA PGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWL GSKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLA RKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKEN AQIKKLGSWLAAQQITGFEP >gi|299856450|gb|ADWV01000001.1| GENE 117 129929 - 130546 895 205 aa, chain - ## HITS:1 COG:yicG KEGG:ns NR:ns ## COG: yicG COG2860 # Protein_GI_number: 16131517 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 205 19 223 223 326 100.0 2e-89 MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVK HPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSIIGAQVALDMGHGPIIAVV AAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLYIALQHYVSNHDVVIISTLVF GFFARLLALRLKLGLPVFYYSHEGH >gi|299856450|gb|ADWV01000001.1| GENE 118 130838 - 131662 588 274 aa, chain - ## HITS:1 COG:no KEGG:ECSE_3926 NR:ns ## KEGG: ECSE_3926 # Name: dinD # Def: DNA-damage-inducible protein D # Organism: E.coli_SE11 # Pathway: not_defined # 1 274 1 274 274 498 100.0 1e-140 MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLARATQACEASNQAASDH FVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVR QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK >gi|299856450|gb|ADWV01000001.1| GENE 119 131883 - 132746 1187 287 aa, chain - ## HITS:1 COG:ECs4519 KEGG:ns NR:ns ## COG: ECs4519 COG1561 # Protein_GI_number: 15833773 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 456 100.0 1e-128 MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRSLEPVVRERIRSRLTRG KVECTLRYEPDVSAQGELILNEKLAKQLVTAANWVKMQSDEGEINPVDILRWPGVMAAQE QDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRLEGVTAEVVKVRAHMPEILQW QRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEELDRLEAHVKETYNILKKKEAVGR RLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE >gi|299856450|gb|ADWV01000001.1| GENE 120 132873 - 133589 868 238 aa, chain + ## HITS:1 COG:ECs4518 KEGG:ns NR:ns ## COG: ECs4518 COG0689 # Protein_GI_number: 15833772 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 416 100.0 1e-116 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT AEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQ ADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVCDLEYVED SAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLLALARGGIESIVATQKAALAN >gi|299856450|gb|ADWV01000001.1| GENE 121 133655 - 134296 852 213 aa, chain + ## HITS:1 COG:ECs4517 KEGG:ns NR:ns ## COG: ECs4517 COG0461 # Protein_GI_number: 15833771 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 1 213 1 213 213 418 99.0 1e-117 MKPYQRQFIEFALGKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDS GLEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEAKDHGEGGNLVGSALQGRV MLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERGRSEISAIQEVERDYNCKVIS IITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV >gi|299856450|gb|ADWV01000001.1| GENE 122 134333 - 134929 664 198 aa, chain - ## HITS:1 COG:ECs4516 KEGG:ns NR:ns ## COG: ECs4516 COG1309 # Protein_GI_number: 15833770 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 198 15 212 212 340 100.0 7e-94 MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFD SLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERNPGLTRILTGHALMFEQDR LQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLASQILAFCEGMLSRFVRSEFKY RPTDDFDARWPLIAAQLQ >gi|299856450|gb|ADWV01000001.1| GENE 123 135036 - 135494 593 152 aa, chain - ## HITS:1 COG:ECs4515 KEGG:ns NR:ns ## COG: ECs4515 COG0756 # Protein_GI_number: 15833769 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Escherichia coli O157:H7 # 2 152 1 151 151 298 100.0 2e-81 MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELAPGDTTLVPTGLAIHIA DPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVWNRGQDSFTIQPGERIAQM IFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ >gi|299856450|gb|ADWV01000001.1| GENE 124 135472 - 136692 1104 406 aa, chain - ## HITS:1 COG:ECs4514 KEGG:ns NR:ns ## COG: ECs4514 COG0452 # Protein_GI_number: 15833768 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Escherichia coli O157:H7 # 1 406 25 430 430 765 100.0 0 MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSLQAVSGYPV SDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVSTICLATPAPVAV LPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGDIGPGRMLDPLTIVDMAVAHF SPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGFAIAAAAARRGANVTLVSGPVSL PTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDEL TIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNLDLICANDVSQPTQ GFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEIVTRYDEKNRR >gi|299856450|gb|ADWV01000001.1| GENE 125 136864 - 137532 439 222 aa, chain + ## HITS:1 COG:ECs4513 KEGG:ns NR:ns ## COG: ECs4513 COG2003 # Protein_GI_number: 15833767 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli O157:H7 # 1 222 3 224 224 430 98.0 1e-120 MKNNSQLMMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLT SEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEER EIFMVIFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEP SKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI >gi|299856450|gb|ADWV01000001.1| GENE 126 137749 - 137985 403 78 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804178|ref|NP_290217.1| 50S ribosomal protein L28 [Escherichia coli O157:H7 EDL933] # 1 78 1 78 78 159 100 1e-37 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID KKGIDTVLAELRARGEKY >gi|299856450|gb|ADWV01000001.1| GENE 127 138006 - 138173 280 55 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804177|ref|NP_290216.1| 50S ribosomal protein L33 [Escherichia coli O157:H7 EDL933] # 1 55 1 55 55 112 100 2e-23 MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK >gi|299856450|gb|ADWV01000001.1| GENE 128 138271 - 139080 797 269 aa, chain + ## HITS:1 COG:ECs4510 KEGG:ns NR:ns ## COG: ECs4510 COG0266 # Protein_GI_number: 15833764 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 556 100.0 1e-158 MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVLSVQRRAKYLL LELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL EGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG IHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK GEPCRVCGTPIVATKHAQRATFYCRQCQK >gi|299856450|gb|ADWV01000001.1| GENE 129 139119 - 139598 393 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 2 159 3 160 164 155 46 2e-36 MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATA HLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMP SKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA >gi|299856450|gb|ADWV01000001.1| GENE 130 139606 - 140883 1115 425 aa, chain - ## HITS:1 COG:ECs4508 KEGG:ns NR:ns ## COG: ECs4508 COG1519 # Protein_GI_number: 15833762 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Escherichia coli O157:H7 # 1 425 1 425 425 831 100.0 0 MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRHPLKPGGIMLHSVSVGE TLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQHVYLPYDLPDALNRFLNK VDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSAAGYAKLGKFVRRLLRRITLI AAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIATST HEGEESVVIAAHQALLQQFPNLLLILVPRHPERFPDAINLVRQAGLSYITRSSGEVPSTS TQVVVGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICA RLEQASGLITVTDATTLAKEVSSLLTDADYRSFYGRHAVEVLYQNQGALQRLLQLLEPYL PPKTH >gi|299856450|gb|ADWV01000001.1| GENE 131 141332 - 142354 566 340 aa, chain + ## HITS:1 COG:ECs4507 KEGG:ns NR:ns ## COG: ECs4507 COG0859 # Protein_GI_number: 15833761 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli O157:H7 # 1 340 13 352 352 699 100.0 0 MRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEINALYGIKNKKAKASEK IANFFHLIKVLRANKYDLIVNLTDQWMVAILVRLLNARVKISQDYHHRQSAFWRKSFTHL VPLQGGNVVESNLSVLTPLGLDSLVKQTTMSYPPASWKRMRRELDHAGVGQNYVVIQPTA RQIFKCWDNAKFSAVIDALHARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVT FPELGALIDHAQLFIGVDSAPAHIAAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYR EMPTRDQRDRNEMYLSVIPAADVIAAVDKLLPSSTTGTSL >gi|299856450|gb|ADWV01000001.1| GENE 132 142351 - 143475 793 374 aa, chain + ## HITS:1 COG:ECs4506 KEGG:ns NR:ns ## COG: ECs4506 COG0438 # Protein_GI_number: 15833760 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 374 1 374 374 764 99.0 0 MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGECPDVFELIKVPVKSHT NHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVCYAEKVAQEKGFFYRLTSR YRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAERFHILPPGIYPDRKYSQQPA NSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEALASLPDSLRHNTLLYVVGQDKPR KFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTT AVCGYAHYIVDANCGEAIAEPFRQETLNEILRKALTQSSLRQAWAENARHYADTQDLYSL PEKAADIITGGLDG >gi|299856450|gb|ADWV01000001.1| GENE 133 143468 - 144265 550 265 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4552 NR:ns ## KEGG: ECO103_4552 # Name: rfaP # Def: lipopolysaccharide core biosynthesis protein FfaP # Organism: E.coli_O103_H2 # Pathway: Lipopolysaccharide biosynthesis [PATH:eoh00540]; Metabolic pathways [PATH:eoh01100] # 1 265 1 265 265 526 100.0 1e-148 MVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAGKSYFLKWHRGTTLKEI IKNLLSLRMPVLGADREWNAIHRLRDVGVDTMYGVAFGEKGMNPLTRTSFIITEDLTPTI SLEDYSADWATNPPDVRVKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFSGKEEE LKISVIDLHRAQLRTRVPRRWRDKDLIGLYFSSMNIGLTQRDIWRFMKVYFAAPLKDILK QEQGLLSQAEAKATKIRERTIRKSL >gi|299856450|gb|ADWV01000001.1| GENE 134 144308 - 145315 230 335 aa, chain + ## HITS:1 COG:ECs4504 KEGG:ns NR:ns ## COG: ECs4504 COG1442 # Protein_GI_number: 15833758 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Escherichia coli O157:H7 # 1 335 1 335 335 654 100.0 0 MSQLNDSDIILFEYNFHYQNIRSKNTLDIAFGIDRNFLFGCGVAIASILLNNREISCEFH VFTDYISDKDKLYFSDLAKQYNSRINIYVINCDKLKSLPSTKNWTYATYFRFIIADYFYH KHEKILYLDADIACKGSIKELLDYQFSTNEIAAVVAERDVEWWQNRASVLTTPQLASGYF NAGFLLINIDEWNLNNISSKAIEMLRDPDWVSKITHLDQDVLNVLLNGKVKFISEKYNTR YSINYELKDKVDNPVNDDTVFIHYVGPTKPWHEWADYPVSRSFLIAKAASPWSKEDLLKP VNSNQYRYCAKHKFKQKHYMAGIFNYLKYYKEKCF >gi|299856450|gb|ADWV01000001.1| GENE 135 145341 - 146048 301 235 aa, chain + ## HITS:1 COG:no KEGG:S4103 NR:ns ## KEGG: S4103 # Name: waaY # Def: lipopolysaccharide core biosynthesis protein # Organism: S.flexneri_2457T # Pathway: Lipopolysaccharide biosynthesis [PATH:sfx00540]; Metabolic pathways [PATH:sfx01100] # 1 235 1 235 235 413 100.0 1e-114 MIYNKTINGLKVFIKDNDPFYEQVLNDFLTCRVKTLKVFRSIDDTKVILIDTARGPLVLK VYAPKHKMTERFLKSCIKKDYYENLIYQTDRVRGEGIQSINDYFLLAERKTLNFAHYYIM LIEYIEGVGLNEYLEISEDLKDQLSESIKELHQHGMVSGDPHKGNFIVSEKGLRLIDLSG KKTTAVLKAKDRIDLERHYNIKNELKDFGYTYLIFKKKIKKVIRDVKVKLGLKSK >gi|299856450|gb|ADWV01000001.1| GENE 136 146073 - 147086 174 337 aa, chain + ## HITS:1 COG:ECs4502 KEGG:ns NR:ns ## COG: ECs4502 COG1442 # Protein_GI_number: 15833756 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Escherichia coli O157:H7 # 1 337 1 337 337 621 100.0 1e-178 MDFKHLTQFKDIIELDKRPVKLDERETFNVSWGIDENYQVGAAISIASILENNKQNKFTF HIIADYLDKEYIELLSQLATKYQTVIKLYHIDSEPLKALPQSNIWPVSIYYRLLSFDYFS ARLDSLLYLDADIVCKGSLNELIALEFKDEYGAVVIDVDAMQSKSAERLCNEDFNGSYFN SGVMYINLREWLKQRLTEKFFDLLSDESIIKKLKYPDQDILNLMFLHHAKILPRKYNCIY TIKSEFEEKNSEYYTRFINDDTVFIHYTGITKPWHDWANYASADYFRNIYNISPWRNIPY KKAVKKHEYKEKYKHLLYQKKFLDGVFTAIKYNVMKG >gi|299856450|gb|ADWV01000001.1| GENE 137 147476 - 148237 206 253 aa, chain + ## HITS:1 COG:ECs4501 KEGG:ns NR:ns ## COG: ECs4501 COG0438 # Protein_GI_number: 15833755 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 253 128 380 380 521 99.0 1e-148 MHNAFEPKLLEQNVKMIVPSLYLKKYYQSYLANADIEIVPNGIDLETYQSNFQPITRSEL NISPEEKIIFYAGRIVPDKGILLLMQSFEKLAAAHKNLKLVVIGDYTEMSKSDKGAYQRN VREIAKRLKDRCIMLGSIPPEKMHCYYPLADLVVIPSQFQEPFCMVAIEAMGAGKPVLVS TRGGMTEFVKENTTGFHLKEPMTADSISSDILKTLANPELTAVAKQGQDFVFEHYSWDGV TQRFEEVIHNWFE >gi|299856450|gb|ADWV01000001.1| GENE 138 148273 - 148974 179 233 aa, chain - ## HITS:1 COG:ECs4500 KEGG:ns NR:ns ## COG: ECs4500 COG3307 # Protein_GI_number: 15833754 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Escherichia coli O157:H7 # 1 233 170 402 402 426 100.0 1e-119 MVFLFPALLNLWLIKSAKYRISFVVLSVIFIFLILGTLSRGAWLSVLVIGLIWILMFKQW KLLLVGVMVAIIALSVIFTHKEMTAKLTYKLQQTNSSYRYANGTQGSALDLILENPVIGY GYGNVAYKDVYNKRVIDYPEWTFRQSIGPHNFALFIWFGTGLLGLVSLMMLYCAILKECI KNGVKNKYRSPYNAYYIILLSFIGYFVIRGNVEQIEPNLLGVYAGLLLAMKNK >gi|299856450|gb|ADWV01000001.1| GENE 139 149478 - 150470 719 330 aa, chain - ## HITS:1 COG:ECs4499 KEGG:ns NR:ns ## COG: ECs4499 COG0859 # Protein_GI_number: 15833753 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 652 98.0 0 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIR RWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAALVTRLAHGVKHGLDWQTAR EPLASLFYNCKHHIAKQQHAVERTRELFAKSLGYSKPQTQGDYAIAQHFLTNLPTDAGEY AVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLP KMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQVECRST SMSLADLPAQTVFQNLNLEIITNKLTSEIR >gi|299856450|gb|ADWV01000001.1| GENE 140 150474 - 151520 956 348 aa, chain - ## HITS:1 COG:rfaF KEGG:ns NR:ns ## COG: rfaF COG0859 # Protein_GI_number: 16131491 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli K12 # 1 348 1 348 348 711 100.0 0 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG HGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGIPHRTGWRGEMRYGLLNDV RVLDKEAWPLMVERYIALAYDKGIMRTAQDLPQPLLWPQLQVSEGEKSYTCNQFSLSSER PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQ AWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVAAALNRPLVALYGPSSPDFTPPLSH KARVIRLITGYHKVRKGDAAEGYHQSLIDITPQRVLEELNALLLQEEA >gi|299856450|gb|ADWV01000001.1| GENE 141 151530 - 152462 1100 310 aa, chain - ## HITS:1 COG:ECs4497 KEGG:ns NR:ns ## COG: ECs4497 COG0451 # Protein_GI_number: 15833751 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 623 100.0 1e-178 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT EYMAWLNRDA >gi|299856450|gb|ADWV01000001.1| GENE 142 152766 - 153341 175 191 aa, chain + ## HITS:1 COG:no KEGG:G2583_4357 NR:ns ## KEGG: G2583_4357 # Name: htrL # Def: involved in lipopolysaccharide biosynthesis # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 180 6 185 290 368 100.0 1e-101 MKSSTTIITAYFDIGRGDWTANKGFREKLARSVDVYFSYFERLAALENEMIIFTSPDLKP RVEAIRNGKPTTVIVIDIKKKFRYIRSRIEKIQKDESFTNRLEPRQLKNPEYWSPEYVLV CNLKAYFVNKAINMGLVKTPLVAWIDFGYCRKPNVTRGLKIWDFPFDESKMHLFTIKKGL LSHLNNRFLIS >gi|299856450|gb|ADWV01000001.1| GENE 143 153338 - 153622 167 94 aa, chain + ## HITS:1 COG:no KEGG:JW5644 NR:ns ## KEGG: JW5644 # Name: htrL # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 94 192 285 285 199 100.0 2e-50 MIGNHVYIIGGAIVGSQHKWKEFYKLVLESQKITLNNNIVDDDQGIFVMCYYKRPDLFNL NYLGRGKWFDLFRCFRSNTLGAKMQALRIFLSRK >gi|299856450|gb|ADWV01000001.1| GENE 144 153897 - 155093 1648 398 aa, chain + ## HITS:1 COG:ECs4495 KEGG:ns NR:ns ## COG: ECs4495 COG0156 # Protein_GI_number: 15833749 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Escherichia coli O157:H7 # 1 398 1 398 398 773 99.0 0 MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHVINFCANNYLGLANHPD LIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFE TLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIAT DGVFSMDGMIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITG TLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRD RLWANARQFREQMSAAGFTLAGADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVV PKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGVIA >gi|299856450|gb|ADWV01000001.1| GENE 145 155103 - 156128 1048 341 aa, chain + ## HITS:1 COG:tdh KEGG:ns NR:ns ## COG: tdh COG1063 # Protein_GI_number: 16131487 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 341 1 341 341 709 99.0 0 MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMV VGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRPGC FAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGIMAA AVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAELGMTEGFDVGLEMS GAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAA LIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSGKVILSWD >gi|299856450|gb|ADWV01000001.1| GENE 146 156370 - 157401 492 343 aa, chain + ## HITS:1 COG:yibD KEGG:ns NR:ns ## COG: yibD COG0463 # Protein_GI_number: 16131486 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 343 2 344 344 679 99.0 0 MNSTNKLSVIIPLYNAGDDFRTCMESLITQTWTALEIIIINDGSTDNSVEIAKHYAENYP HVRLLHQANAGASVARNRGIEVATGKYVAFVDADDEVYPTMYETLMTMALEDDLDVAQCN ADWCFRETGETWQSIPSDRLRSTGVLTGPDWLRMGLSSRRWTHVVWMGVYRRDVIVKNNI KFIAGLHHQDIVWTTEFMFNALRARYTEQSLYKYYLHNTSVSRLHRQGNKNLNYQRHYIK ITRLLEKLNRNYADKITIYPEFHQQITYEALRVCHAVRKEPDILTRQRMIAEIFTSGMYK RLITNVRSVKVGYQALLWSFRLWQWRDKTRSHHRITRSAFNLR >gi|299856450|gb|ADWV01000001.1| GENE 147 157388 - 158347 768 319 aa, chain - ## HITS:1 COG:ECs4492 KEGG:ns NR:ns ## COG: ECs4492 COG2861 # Protein_GI_number: 15833746 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 43 319 1 277 277 529 99.0 1e-150 MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPH AREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGI NNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDD SQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQMVYNLPPDITLVKASSLLNE PQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFFEVLSESISQSTLIVYFQH QWQGWGKQPEAAKFNASAN >gi|299856450|gb|ADWV01000001.1| GENE 148 158351 - 159610 1409 419 aa, chain - ## HITS:1 COG:ECs4491 KEGG:ns NR:ns ## COG: ECs4491 COG4942 # Protein_GI_number: 15833745 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Membrane-bound metallopeptidase # Organism: Escherichia coli O157:H7 # 1 419 9 427 427 602 100.0 1e-172 MTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADERDQLKSIQADIAAKERAVRQKQQQ RASLLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQ LDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQETIAQLKQTREEVAMQRAEL EEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESSIQQGQQQLSELRANESRLRNSI ARAEAAAKARAEREAREAQAVRDRQKEATRKGTTYKPTESEKSLMSRTGGLGAPRGQAFW PVRGPTLHRYGEQLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGLVVVVEHGK GDMSLYGYNQSALVSVGSQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR >gi|299856450|gb|ADWV01000001.1| GENE 149 159644 - 161188 1752 514 aa, chain - ## HITS:1 COG:ECs4490 KEGG:ns NR:ns ## COG: ECs4490 COG0696 # Protein_GI_number: 15833744 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Escherichia coli O157:H7 # 1 514 1 514 514 1008 99.0 0 MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPHTLIDASGLEVGLPDRQ MGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLS VGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAESSLKKFEEKFAALGKGR VASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADTAVAGLQAAYARDENDEFVKATV IRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAA DIKTAVAYPPASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILI NSPKVATYDLQPEMSSAELTEKLVAAIKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEA LDHCVEEVAKAVESVGGQLLITADHGNAEQMRDPATGQAHTAHTNLPVPLIYVGDKNVKA VAGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE >gi|299856450|gb|ADWV01000001.1| GENE 150 161433 - 161864 422 143 aa, chain + ## HITS:1 COG:ECs4489 KEGG:ns NR:ns ## COG: ECs4489 COG0607 # Protein_GI_number: 15833743 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli O157:H7 # 1 143 1 143 143 274 98.0 4e-74 MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVISRGEATRLINKEDAVVVDLR QRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDGSGLQCQEPANALTKAGFA QVFVLKEGVAGWAGENLPLVRGK >gi|299856450|gb|ADWV01000001.1| GENE 151 162005 - 162256 323 83 aa, chain + ## HITS:1 COG:ECs4488 KEGG:ns NR:ns ## COG: ECs4488 COG0695 # Protein_GI_number: 15833742 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Escherichia coli O157:H7 # 1 83 1 83 83 173 100.0 9e-44 MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDA QHIGGCDDLYALDARGGLDPLLK >gi|299856450|gb|ADWV01000001.1| GENE 152 162319 - 162786 501 155 aa, chain + ## HITS:1 COG:ECs4487 KEGG:ns NR:ns ## COG: ECs4487 COG1952 # Protein_GI_number: 15833741 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecB # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 308 99.0 2e-84 MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDLDTASTQLADDVYEVVL RVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYCPNILFPYARECITSMVSR GTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA >gi|299856450|gb|ADWV01000001.1| GENE 153 162786 - 163805 1010 339 aa, chain + ## HITS:1 COG:ECs4486 KEGG:ns NR:ns ## COG: ECs4486 COG0240 # Protein_GI_number: 15833740 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 339 1 339 339 664 100.0 0 MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATLERDRCNAAFLPDVPFP DTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPDARLVWATKGLEAETGRLL QDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTDQTFADDLQQLLHCGKSFRVY SNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMSRLGAALGADPATF MGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSAQEKIGQVVEGYRNTKEVRELAHRF GVEMPITEEIYQVLYCGKNAREAALTLLGRARKDERSSH >gi|299856450|gb|ADWV01000001.1| GENE 154 163885 - 164397 543 170 aa, chain + ## HITS:1 COG:ECs4485 KEGG:ns NR:ns ## COG: ECs4485 COG1045 # Protein_GI_number: 15833739 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Escherichia coli O157:H7 # 1 168 1 168 273 343 98.0 7e-95 MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPA IAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWL WNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGENGGN >gi|299856450|gb|ADWV01000001.1| GENE 155 164378 - 164707 314 109 aa, chain + ## HITS:1 COG:ECs4485 KEGG:ns NR:ns ## COG: ECs4485 COG1045 # Protein_GI_number: 15833739 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Escherichia coli O157:H7 # 2 109 166 273 273 212 99.0 1e-55 MKTAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGS VVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI >gi|299856450|gb|ADWV01000001.1| GENE 156 164760 - 165233 426 157 aa, chain - ## HITS:1 COG:ECs4484 KEGG:ns NR:ns ## COG: ECs4484 COG0219 # Protein_GI_number: 15833738 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 324 100.0 5e-89 MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRH HDFRAFLEAENPQRLFALTTKGTPAHSAVNYQDGDYLMFGPETRGLPASILDALPAEQKI RIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGALLRD >gi|299856450|gb|ADWV01000001.1| GENE 157 165419 - 166609 1477 396 aa, chain - ## HITS:1 COG:ECs4483 KEGG:ns NR:ns ## COG: ECs4483 COG1304 # Protein_GI_number: 15833737 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 785 100.0 0 MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSL ETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAI KRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMR RYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWI RDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGD IAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMT LTGAKSISEITQDSLVQGLGKELPTALAPMAKGNAA >gi|299856450|gb|ADWV01000001.1| GENE 158 166606 - 167382 681 258 aa, chain - ## HITS:1 COG:lldR KEGG:ns NR:ns ## COG: lldR COG2186 # Protein_GI_number: 16131475 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 258 1 258 258 486 99.0 1e-137 MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGV LLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDILEARYAIEASTAWHAAMRA TPGDKEKIQLCFEATLSEDPDIASQADVRFHLAIAEASHNIVLLQTMRGFFDVLQSSVKH SRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAMMAHLSFVHTTMKRFDEDQARHA RITRLPGEHYEHSREKNA >gi|299856450|gb|ADWV01000001.1| GENE 159 167382 - 169037 1881 551 aa, chain - ## HITS:1 COG:ECs4481 KEGG:ns NR:ns ## COG: ECs4481 COG1620 # Protein_GI_number: 15833735 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Escherichia coli O157:H7 # 1 551 1 551 551 928 99.0 0 MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAASWTVAIALAVALLFYKM PVANALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDIIRSSILSITPDQRLQMLI VGFCFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLCLIVNTAPVAFGAMGIPILVA GQVTGIDSFEIGQMVGRQLPFMTIIVLFWIMAIMDGWRGIKETWPAVVVAGGSFAIAQYL SSNFIGPELPDIISSLVSLLCLTLFLKRWQPVRVFRFGDLGASQVDMTLAHTGYTAGQVL RAWTPFLFLTATVTLWSIPPFKALFASGGALYEWEINIPVPYLDKLVARMPPVVSEATAY AAVFKFDWFSATGTAILFAALLSIVWLKMKPSDAISTFGSTLKELALPIYSIGMVLAFAF ISNYSGLSSTLALALAHTGHAFTFFSPFLGWLGVFLTGSDTSSNALFAALQATAAQQIGV SDLLLVAANTTGGVTGKMISPQSIAIACAAVGLVGKESDLFRFTVKHSLIFTCMVGVITT LQAYVLTWMIP >gi|299856450|gb|ADWV01000001.1| GENE 160 169406 - 174256 4005 1616 aa, chain - ## HITS:1 COG:ECs4480 KEGG:ns NR:ns ## COG: ECs4480 COG5295 # Protein_GI_number: 15833734 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 1 1616 1 1588 1588 1999 97.0 0 MNKIFKVIWNPATGNYTVTSETAKSRGKKSGRSKLLISALVAGGMLSSFGALANAGNDNG QGVDYGSGSAGDGWVAIGKGAKANTFMNTSGSSTAVGYDAIAEGQYSSAIGSKTHAIGGA SMAFGVSAISEGDRSIALGASSYSLGQYSMALGRYSKALGKLSIAMGDSSKAEGANAIAL GNATKATEIMSIALGDTANASKAYSMALGASSVASEENAIALGRSSVASGTDSLAFGRQS LASAANAIAIGAETEAAENATAIGNNAKAKGTNSMAMGFGSLADKVNTIALGNGSQALAD NAIAIGQGNKADGVDAIALGNGSQSRGLNTIALGTASNATGDKSLALGSNSSANGINSVA LGADSIADLDNTVSVGNSSLKRKIVNVKNGAIKSDSYDAINGSQLYAISDSVAKRLGGGA AVDVDDGTVTAPTYNLKNGSKNNVGAALAVLDENTLQWDQTKGKYSAAHGTSSPTASVIT DVADGTISASSKDAVNGSQLKATNDDVEANTANIATNTSNIATNTANIATNTTNITNLTD SVGDLQADALLWNETKKAFSAAHGQDTTSKITNVKDADLTADSTDAVNGSQLKTTNDAVA TNTTNIANNTSNIATNTTNISNLTETVTNLGEDALKWDKDNGVFTAAHGTETTSKITNVK DGDLTTGSTDAVNGSQLKTTNDAVATNTTNIATNTTNISNLTETVTNLGEDALKWDKDNG VFTAAHGNNTASKITNILDGTVTATSSDAINGSQLYDLSSNIATYFGGNASVNTDGVFTG PTYKIGETNYYNVGDALAAINSSFSTSLGDALLWDATAGKFSAKHGTNGDASVITDVADG EISDSSSDAVNGSQLHGVSSYVVDALGGGAEVNADGTITAPTYTIANADYDNVGDALNAI DTTLDDALLWDADAGENGAFSAAHGKDKTASVITNVANGAISAASSDAINGSQLYTTNKY IADALGGDAEVNADGTITAPTYTIANAEYNNVGDALDALDDNALLWDETANGGAGAYNAS HDGKASIITNVANGSISEDSTDAVNGSQLNATNMMIEQNTQIINQLAGNTDATYIQENGA GINYVRTNDDGLAFNDASAQGVGATAIGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSV SSRVIAKGSRDTSITENGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTV RQLQNAIGAVATTPTKYFHANSTEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVDAN ALNGIAIGSNAQVIHVNSIAIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGSADGQRQ ITNVAAGSADTDAVNVGQLKVTDAQVSQNTQSITNLDNRVTNLDSRVTNIENGIGDIVTT GSTKYFKTNTDGVDASAQGKDSVAIGSGSIAAADNSVALGTGSVATEENTISVGSSTNQR RITNVAAGKNDTDAVNVAQLKSSEAGGVRYDTKADGSIDYSNITLGGGNGGTTRISNVSA GVNNNDAVNYAQLKQSVQETKQYTDQRMVEMDNKLSKTESKLSGGIASAMAMTGLPQAYT PGASMASIGGGTYNGESAVALGVSMVSANGRWVYKLQGSTNSQGEYSAALGAGIQW >gi|299856450|gb|ADWV01000001.1| GENE 161 174300 - 174983 251 227 aa, chain - ## HITS:1 COG:no KEGG:ECO26_4996 NR:ns ## KEGG: ECO26_4996 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 227 1 227 242 414 99.0 1e-114 MNLKKIFFSAVTVSVLCALTGCDYIEEGKPESSLLKQQEEHNNKIDLLEKQQAQLKSQLE TIQKQQTGIINSTKTLTHVIKSVKDQQNTFIFTEFNPAKTKYFILNNGSVALAGRVLSID ATENGSVIHISLVNLLSTPISNIGFNATWGGEKPVDAKEFARWQQLLFNTSMKSTLKLLP GQWQDINLTLKGVSPNNLGYLKLAINMENIQFDNLPSAENRQKRSKK >gi|299856450|gb|ADWV01000001.1| GENE 162 175527 - 175889 536 120 aa, chain - ## HITS:1 COG:no KEGG:ECSP_4596 NR:ns ## KEGG: ECSP_4596 # Name: yibL # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 120 1 120 120 167 100.0 1e-40 MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKL SKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTALGREMGLQEMTGFSKTAF >gi|299856450|gb|ADWV01000001.1| GENE 163 176174 - 176383 222 69 aa, chain + ## HITS:1 COG:no KEGG:JW3576 NR:ns ## KEGG: JW3576 # Name: yibT # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 69 1 69 69 121 100.0 6e-27 MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPDESVPLYLQRLEYYRRL YRPKQVEGQ >gi|299856450|gb|ADWV01000001.1| GENE 164 176395 - 176982 401 195 aa, chain - ## HITS:1 COG:ECs4477 KEGG:ns NR:ns ## COG: ECs4477 COG3722 # Protein_GI_number: 15833731 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 195 1 195 195 367 100.0 1e-101 MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRSFLITAVELLTEAVNLL VLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVINRQEYEDAELLMALREEL NHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSLYAMQIQRYQQAVRSTMVLSL TELISRISLKKAFQK >gi|299856450|gb|ADWV01000001.1| GENE 165 176982 - 178130 1548 382 aa, chain - ## HITS:1 COG:ECs4476 KEGG:ns NR:ns ## COG: ECs4476 COG0246 # Protein_GI_number: 15833730 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 732 99.0 0 MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTV SGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNIIAC ENMVRGTTQLKGHVMNALPEDAKAWVEEHVGFVDSAVDRIVPPSASATNDPLEVTVETFS EWIVDKTQFKGALPNIPGMELTDNLMAFVERKLFTLNTGHAITAYLGKLAGHQTIRDAIL DEKIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQKILGRFENPYLKDDVERVGRQPLRK LSAGDRLIKPLLGTLEYSLPHKNLIQGIAGAMHFRSEDDPQAQELAALIADKGPQAALAQ ISGLDANSEVVSEAVTAYKAMQ >gi|299856450|gb|ADWV01000001.1| GENE 166 178225 - 180138 2545 637 aa, chain - ## HITS:1 COG:mtlA_1 KEGG:ns NR:ns ## COG: mtlA_1 COG2213 # Protein_GI_number: 16131470 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Escherichia coli K12 # 1 493 1 493 493 926 100.0 0 MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLPNETLAKLVGPMITYLL PLLIGYTGGKLVGGERGGVVGAITTMGVIVGADMPMFLGSMIAGPLGGWCIKHFDRWVDG KIKSGFEMLVNNFSAGIIGMILAILAFLGIGPIVEALSKMLAAGVNFMVVHDMLPLASIF VEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIEANPGPGMGVLLAYMFFGRGSAK QSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILGGMTGVFTLTILGGGLVSPASPGSI LAVLAMTPKGAYFANIAGVCAAMAVSFVVSAILLKTSKVKEEDDIEAATRRMQDMKAESK GASPLSAGDVTNDLSHVRKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQISVTNSAINNL PPDVDLVITHRDLTERAMRQVPQAQHISLTNFLDSGLYTSLTERLVAAQRHTANEEKVKD SLKDSFDDSSANLFKLGAENIFLGRKAATKEEAIRFAGEQLVKGGYVEPEYVQAMLDREK LTPTYLGESIAVPHGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEH IQVITSLTNALDDESVIERLAHTTSVDEVLELLAGRK >gi|299856450|gb|ADWV01000001.1| GENE 167 180675 - 181037 335 120 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_3931 NR:ns ## KEGG: EcSMS35_3931 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 120 35 154 154 238 100.0 6e-62 MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAIHTAGWVSLFTLHVIWP FLWIWATLYQPERGWGMQSHVASQEKATDPEIAALSDRISRLEHQLAAEKKTDYSTFPEI >gi|299856450|gb|ADWV01000001.1| GENE 168 181040 - 182176 1045 378 aa, chain + ## HITS:1 COG:ECs4473 KEGG:ns NR:ns ## COG: ECs4473 COG1566 # Protein_GI_number: 15833727 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 723 100.0 0 MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLILLMNYNHPYTFTAQKA VIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTL RAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKG SVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTY AAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSILPV VPGGSYQAQGVLQSLTVVPGTDGVLGTIELDPNDDIDALPDGIYAQVAVYSDHFSHVSVM RKVLLRMTSWMHYLYLDH >gi|299856450|gb|ADWV01000001.1| GENE 169 182636 - 183073 99 145 aa, chain - ## HITS:1 COG:no KEGG:ECSE_3874 NR:ns ## KEGG: ECSE_3874 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 145 1 145 145 225 99.0 5e-58 MADKAILWALISASNKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYN IDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKIIDINSVNICS DDKNIKLRVNSTIMAIDDSIKCIDE >gi|299856450|gb|ADWV01000001.1| GENE 170 183780 - 184241 65 153 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4059 NR:ns ## KEGG: EC55989_4059 # Name: yibG # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 153 1 153 153 280 100.0 8e-75 MKACLLLFFYFSLIGQLHGADVKIKENESVMGSTAMTYDLSEEKLMKLKYKSQHGDSEAS FRLYQYYCFTKNNIDKQLRFLERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWM EFAVNNGNIDTKSKLQELKKLKRMDRRKNKENP >gi|299856450|gb|ADWV01000001.1| GENE 171 184253 - 188482 2680 1409 aa, chain - ## HITS:1 COG:ECs4470 KEGG:ns NR:ns ## COG: ECs4470 COG3209 # Protein_GI_number: 15833724 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 # 1 1409 1 1409 1409 2753 97.0 0 MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPG ETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRS LYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQ GPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDG AGRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDP EYPENLPAAPLVRYGWTPRGELAVVYDRSGKQVRSFTYDDKYRGRMVAHRHTGRPEIRYR YDSDGRVTEQLNPAGLSYTYQYEKDHITITDSLDRREVLHTQGEAGLKRVVKKEHADGSV TQSQFDAVGRLKAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHSQLTSATGP DGLEMRRKYDEYGRLIQETAPDGDITRYRYDNPHSDLPCATDDATGSRKTMTWSRYGQLL SFTDCSGYVTRYDHDRFGQVTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNIAG DLTAVIAPDGSRNGTQYDAWGKAICTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDV LDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVNGETAEQWQY DERGWLTDISHISEGHRVTVHYGYDEKGRLTGERQTVHHPQTEALLWQHETRHAYNAQGL ANRCIPDSLPAVEWLTYGSGYLAGMKLGDTPLVEYTRDRLHRETLRSFGRYELTTAYTPA GQLQSQHLNSLLSDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIP YATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTD DERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSR KPQVTWYGWDGDRLTTIQNDRSRIQTIYQPGSFTPLIRVETATGELARTQRRSLADALQQ SGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPA RKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEES GLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIH SVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTG KGQNSFASQLAKELHTNVIGPDTLWTWWGRGTNGKLKMDTVLTAPTNLNSNKDLMAITTK DLGNWITYGPSGHPISNMQGTPEKPSDIR >gi|299856450|gb|ADWV01000001.1| GENE 172 188711 - 189319 700 202 aa, chain + ## HITS:1 COG:yibF KEGG:ns NR:ns ## COG: yibF COG0625 # Protein_GI_number: 16131463 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli K12 # 1 202 1 202 202 401 100.0 1e-112 MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECW FDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSE DELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPH LVKLVENLFSRESFARTEPPKA >gi|299856450|gb|ADWV01000001.1| GENE 173 189417 - 190808 1423 463 aa, chain + ## HITS:1 COG:ECs4468 KEGG:ns NR:ns ## COG: ECs4468 COG1921 # Protein_GI_number: 15833722 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 843 100.0 0 MTTETRSLYSQLPAIDRLLRDSSFLSLRDTYGHTRVVELLRQMLDEAREVIRGSQTLPAW CENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAEAAVEAVAQAMRSPVTLEY DLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLMLAATASGKEVVVSRGELVEI GGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNENTALLMKVHTSNYSIQGFTKAID EAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEPMPQELIAAGVSLVSFSGDKLLGGP QAGIIVGKKEMIARLQSHPLKRALRADKMTLAALEATLRLYLHPEALSEKLPTLRLLTRS AEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLSQIGSGSLPVDRLPSAALTFTPHDGRGSH LESLAARWRELPVPVIGRIYDGRLWLDLRCLEDEQRFLEMLLK >gi|299856450|gb|ADWV01000001.1| GENE 174 190805 - 192649 1893 614 aa, chain + ## HITS:1 COG:selB KEGG:ns NR:ns ## COG: selB COG3276 # Protein_GI_number: 16131461 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Selenocysteine-specific translation elongation factor # Organism: Escherichia coli K12 # 1 614 1 614 614 1204 99.0 0 MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPG HEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEA RVNEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREHLLQLPGREHASQHSFRLAID RAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETAHAGQRIALN IAGDAEKEQINRGDWLLADAPPEPFTRVIVELQTHTPLTQWQPLHIHHAASHVTGRVSLL EDNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLA RAQSDADALSVHLERGAVNLADFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQ RKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLLLIEKMRESGDILSHHGWLHL PDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIV KDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRG NDHLLRDALLFPEK >gi|299856450|gb|ADWV01000001.1| GENE 175 192839 - 193990 1375 383 aa, chain + ## HITS:1 COG:ECs4466 KEGG:ns NR:ns ## COG: ECs4466 COG1454 # Protein_GI_number: 15833720 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 383 1 383 383 707 99.0 0 MASSTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDSMLTKLGMAGDVQKALEERNI FSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHDCAKGIALVAANGGDIRDY EGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIKMAIVDKHVTPLLSVNDSSLM IGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALKAVTMIAENLPLAVEDGSNAKAR EAMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYNLPHGVCNAVLLPHVQVFNSKVAAARL RDCAAAMGVNVTGKNDAEGAEACINAIRELAKKVDIPAGLRDLNVKEEDFAVLATNALKD ACGFTNPIQATHEEIVAIYRAAM >gi|299856450|gb|ADWV01000001.1| GENE 176 194155 - 195693 1815 512 aa, chain + ## HITS:1 COG:aldB KEGG:ns NR:ns ## COG: aldB COG1012 # Protein_GI_number: 16131459 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 512 31 542 542 1071 99.0 0 MTNNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQNLTPVTGQLLCEVASSG KRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETS AADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEPLGVVGQIIPWNFPLLMASWK MAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGVVNVVNGAGGEIGEYLATSKRIA KVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFA FNQGEVCTCPSRALVQESIYERFMERAIRRVESIRSGNPLDSVTQMGAQVSHGQLETILN YIDIGKKEGADVLTGGRRKLLEGELKDGYYLEPTILFGQNNMRVFQEEIFGPVLAVTTFK TMEEALELANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQS GIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF >gi|299856450|gb|ADWV01000001.1| GENE 177 195912 - 196124 131 70 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_3755 NR:ns ## KEGG: ECIAI1_3755 # Name: not_defined # Def: conserved hypothetical protein, putative membrane protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 70 1 70 70 124 100.0 1e-27 MCCLVFQQDEVYHIEIVELLAKLMNNSSKTSTVQIKRIKPSIIYRLLLIGLGSPMVIYGL VRPLTIETRD >gi|299856450|gb|ADWV01000001.1| GENE 178 196238 - 196561 359 107 aa, chain + ## HITS:1 COG:no KEGG:B21_03393 NR:ns ## KEGG: B21_03393 # Name: yiaW # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 107 1 107 107 199 100.0 3e-50 MFLDYFALGVLIFVFLVIFYGIIILHDIPYLIAKKRNHPHADAIHVAGWVSLFTLHVIWP FLWIWATLYRPERGWGMQSHDSSVMQLQQRIAGLEKQLADIKSSSAE >gi|299856450|gb|ADWV01000001.1| GENE 179 196567 - 197703 1048 378 aa, chain + ## HITS:1 COG:yiaV KEGG:ns NR:ns ## COG: yiaV COG1566 # Protein_GI_number: 16131457 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 378 1 378 378 726 100.0 0 MDLLIILTYVAFAWAMFKIFKIPVNKWTIPTAALGGIFIVSGLILLMNYNHPYTFKAQKA VISIPVVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRAL GAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKS SAAEQKQIQSQLDSLVLGEHSQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIRPGTY AASLPLRPVMVFIPDQKRQIVAQFRQNSLLRLAPGDDAEVVFNALPGKVFSGKLAAISPA VPGGAYQSTGTLQTLNTAPGSDGVIATIELDEHTDLSALPDGIYAQVAVYSDHFSHVSVM RKVLLRMTSWVHYLYLDH >gi|299856450|gb|ADWV01000001.1| GENE 180 197700 - 198674 621 324 aa, chain - ## HITS:1 COG:yiaU KEGG:ns NR:ns ## COG: yiaU COG0583 # Protein_GI_number: 16131456 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 324 1 324 324 660 99.0 0 MTKLQLKYRELKIISVIAASENISHAATVLGIAQANVSKYLADFESKVGLKVFDRTTRQL MLTPFGTALLPYINDMLDRNEQLNNFIADYKHEKRGRVTIYAPTGIITYLSKHVIDKIKD IGDITLSLKTCNLERNAFYEGVEFPDDCDVLISYAPPKDESLVASFITQYAVTAYASQRY LEKHPISRPDELEHHSCILIDSMMIDDANIWRFNVAGSKEVRDYRVKGNYVCDNTQSALE LARNHLGIVFAPDKSVQSDLQDGTLVPCFQHPYEWWLDLVAIFRKREYQPWRVQYVLDEM LREIRHQLAQSQQLRPEQAAESED >gi|299856450|gb|ADWV01000001.1| GENE 181 198798 - 199538 725 246 aa, chain + ## HITS:1 COG:ECs4460 KEGG:ns NR:ns ## COG: ECs4460 COG3713 # Protein_GI_number: 15833714 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein V # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 471 99.0 1e-133 MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNKNTKAIPLISYEGDSFYVR QTTLGFILSQSEKNELSLTASWMPLEFDPADNDDYAMQQLDKRDSTAMAGVAWYHHERWG TVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESR RSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVT GVSWRF >gi|299856450|gb|ADWV01000001.1| GENE 182 199885 - 200580 574 231 aa, chain - ## HITS:1 COG:sgbE KEGG:ns NR:ns ## COG: sgbE COG0235 # Protein_GI_number: 16131454 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 231 1 231 231 463 99.0 1e-130 MLEQLKADVLAANLALPAHHLVTFTWGNVSAVDDTRQWMVIKPSGVEYDVMTADDMVVVE IASGKVVEGSKKPSSDTPTHLALYRRYAEIGGIVHTHSRHATIWSQAGLDLPAWGTTHAD YFYGAIPCTRQMTAEEINGEYEYQTGEVIIETFEERGRSPAQIPAVLVHSHGPFAWGKNA ADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKHYLRKHGANAYYGQ >gi|299856450|gb|ADWV01000001.1| GENE 183 200574 - 201434 905 286 aa, chain - ## HITS:1 COG:sgbU KEGG:ns NR:ns ## COG: sgbU COG3623 # Protein_GI_number: 16131453 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli K12 # 1 286 12 297 297 573 98.0 1e-163 MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSTAQRTSLVA AMIETGVGIPSMCLSAHRRFPFGSRDEAVRERAREIMSKAIRLARDLGIRTIQLAGYDVY YEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAFMNSISKWKKWDEMLASPWFTV YPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTGQSPGQFRDVPFGEGCVDFVGIF KTLHELNYRGSFLIEMWTEKAKEPVLEIIQARRWIEARMQEAGFIC >gi|299856450|gb|ADWV01000001.1| GENE 184 201427 - 202089 864 220 aa, chain - ## HITS:1 COG:sgbH KEGG:ns NR:ns ## COG: sgbH COG0269 # Protein_GI_number: 16131452 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Escherichia coli K12 # 1 220 1 220 220 402 98.0 1e-112 MSRPLLQLALDHSSLEAAQRDVTQLKDSVDIVEAGTILCLNEGLGAVKALREQCPDKIIV ADWKVADAGETLAQQAFGAGANWMTIICAAPLATVEKGHAMAQRCGGEIQIELFGNWTLD DARDWHRIGVRQAIYHHGRDAQASGQQWGEADLARMKALSDIGLELSITGGITPADLPLF KDIRVKAFIAGRALAGSANPAQVAGDFHAQIDAIWGGKRA >gi|299856450|gb|ADWV01000001.1| GENE 185 202086 - 203582 1463 498 aa, chain - ## HITS:1 COG:lyxK KEGG:ns NR:ns ## COG: lyxK COG1070 # Protein_GI_number: 16131451 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 498 1 498 498 1027 98.0 0 MTQYWLGLDCGGSWLKAGLYDREGREAGVQRLPLCALSPQPGWAERDMAELWQCCMAVIR ELLTHSGVSGEQIVGIGISAQGKGLFLLDKNNKPLGNAILSSDRRAMEIVRRWQEDGIPE KLYPLTRQTLWTGHPVSLLRWLKEHEPERYAQIGCVMMTHDYLRWCLTGVKGCEESNISE SNLYNMSLGEYDPCLTDWLGIAEINHALPPVVGSAEICGEITAQTAVLTGLKAGTPVVGG LFDVVSTALCAGIEDEFTLNAVMGTWAVTSGITRGLRDGEAHPYVYGRYVNDGEFIVHEA SPTSSGNLEWFTAQWGEISFDEINQAVASLPKAGGDLFFLPFLYGSNAGLEMTSGFYGMQ AIHTRAHLLQAIYEGVVFSHMTHLNRMRERFTDVHTLRVTGGPAHSDVWMQMLADVSGLR IELPQVEETGCFGAALAARVGTGVYRDFSEAQRDLQHPVRTLLPDMTAHQLYQQKYQRYQ HLIAALQGFHARIKEHIL >gi|299856450|gb|ADWV01000001.1| GENE 186 203586 - 204572 388 328 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126646731|ref|ZP_01719241.1| Ribosomal protein L22 [Algoriphagus sp. PR1] # 4 328 3 325 328 154 28 7e-36 MKLRSVTYALFIAGLAAFSTSSLAAQSLRFGYETSQTDSQHIAAKKFNDLLQERTKGELK LKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDVPFLFRDTAHAHKTL DGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGLKIRTNNSPMNIAAF KVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFFEVQKYLSLTHHAYSPLLVVI NKAKFDGLSPEFQQALISSAQEAGNYQRKLVAEDQQKIIDGMKEAGVEVITDLDRKAFSD ALGTQVRDMFVKDVPQGADLLKAVDEVQ >gi|299856450|gb|ADWV01000001.1| GENE 187 204585 - 205865 754 426 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 [Algoriphagus sp. PR1] # 1 419 3 423 431 295 36 3e-78 IMAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMAQTLVNGADSFSLLAI PFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAMIMASLSGSAVADTAAVA ALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFGVSSGLSISKLFMAGIAPGM MMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIWALFLPVIIIGGFRSGLFTPTE AGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTSVVMFLVASAQVSAWLITIAELPM MVSDLLQPLVDSPRLLFIVIMVAILIVGMVMDLTPTVLILTPVLMPLVKEAGIDPIYFGV MFIINCSIGLITPPIGNVLNVISGVAKLKFDDAVRGVFPYVLVLYSLLVVFVFIPDLIIL PLKWIN >gi|299856450|gb|ADWV01000001.1| GENE 188 205865 - 206338 332 157 aa, chain - ## HITS:1 COG:yiaM KEGG:ns NR:ns ## COG: yiaM COG3090 # Protein_GI_number: 16131448 # Func_class: G Carbohydrate transport and metabolism # Function: TRAP-type C4-dicarboxylate transport system, small permease component # Organism: Escherichia coli K12 # 1 157 1 157 157 284 100.0 4e-77 MKKILEAILAINLAVLSCIVFINIILRYGFQTSILSVDELSRYLFVWLTFIGAIVAFMDN AHVQVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGATLKTIQDWSDYSPILGLPIGL MYAACLPTSLVIAFFELRHLYQLITRSNSLTSPPQGA >gi|299856450|gb|ADWV01000001.1| GENE 189 206456 - 206923 490 155 aa, chain - ## HITS:1 COG:yiaL KEGG:ns NR:ns ## COG: yiaL COG2731 # Protein_GI_number: 16131447 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli K12 # 1 155 1 155 155 306 96.0 7e-84 MIFGHIAQPNPCRLPAAIEKGLDFLRATDFNALEPGVVEIDGKNIYAQIIDLTTREAVEN RPEVHRRYIDIQFLAWGEEKIGIAIDTGNNKVSESLLEQRDIIFYHDSEHESFIEMIPGS YAIFFPQDVHRPGCILQTASEIRKIVVKVALTALN >gi|299856450|gb|ADWV01000001.1| GENE 190 206935 - 207933 1088 332 aa, chain - ## HITS:1 COG:yiaK KEGG:ns NR:ns ## COG: yiaK COG2055 # Protein_GI_number: 16131446 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 1 332 1 332 332 672 99.0 0 MKVTFEQLKAAFNRVLISRGVDSETADACAEMFARTTESGVYSHGVNRFPRFIQQLENGD IIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAADHGIGLVALRNANHWMRG GSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLIVAIPSTPITMVDMSMSMFSY GMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRILPMGYWKGSGMSIVLDMIATLL SDGASVAEVTQDNSDEYGISQIFIAIEVDKLIDGPTRDAKLQRIMDYVTTAERADENQAI RLPGHEFTTLLAENRRNGITVDDSVWAKIQAL >gi|299856450|gb|ADWV01000001.1| GENE 191 208134 - 208982 716 282 aa, chain + ## HITS:1 COG:yiaJ KEGG:ns NR:ns ## COG: yiaJ COG1414 # Protein_GI_number: 16131445 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 282 1 282 282 565 99.0 1e-161 MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCPLAHLSELAGLNKSTVH RLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIHIAAPHLEALNIATGETIN FSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMGKIYMAFGHPDYVKSYWENHQ HEIQPLTRNTITELPAMFDELAHIRESGAAMDREENELGVSCIAVPVFDIHGRVPYAVSI SLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRDDLGAIT >gi|299856450|gb|ADWV01000001.1| GENE 192 209084 - 209557 205 157 aa, chain + ## HITS:1 COG:ECs4456 KEGG:ns NR:ns ## COG: ECs4456 COG1142 # Protein_GI_number: 15833710 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 261 100.0 3e-70 MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRIRVIKDHSWTTAVACHQ CEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDL CWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV >gi|299856450|gb|ADWV01000001.1| GENE 193 209709 - 210962 1357 417 aa, chain - ## HITS:1 COG:ECs4455 KEGG:ns NR:ns ## COG: ECs4455 COG3977 # Protein_GI_number: 15833709 # Func_class: E Amino acid transport and metabolism # Function: Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase # Organism: Escherichia coli O157:H7 # 1 417 1 417 417 874 99.0 0 MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIPEMQDYFQTLLTDMLES GKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEAQNIALTNGSQSAFFYLFNLFAGR RADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEET GMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPN IVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLR LSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKPEGAIFLWLWFKDLPITTEQLYQRLK ARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYVPEPEKIEAGVKILAEEIERAWAESH >gi|299856450|gb|ADWV01000001.1| GENE 194 211140 - 213170 1585 676 aa, chain - ## HITS:1 COG:ECs4454 KEGG:ns NR:ns ## COG: ECs4454 COG0366 # Protein_GI_number: 15833708 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 676 1 676 676 1361 99.0 0 MKLAACFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPKGTRPLTLNFDQQCWQP ADAIKLNQMLSLQPCSNTPPQWRLFRDGKYTLQIDTRSGTPTLMISIQNAAEPVANLVRE CPKWDGLPLTLDVSATFPEGAAVRDYYSQQIAIVKNGQITLQPAATSNGLLLLERAETDA PAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEIGTFHGGDLRGLTNKLDYLQQ LGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQDWTNLDANMGNEADLRTLVDSA HQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEVKKTLGERWSDWKPAAGQTWHS FNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVF YKNKTDTHAKVIEGFTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKTEASAA LREWKKANPDKALDDKPFWMTGEAWGHGVMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQ MDTTWQQMAEKLQGFNVLSYLSSHDTRLFREGGDKAAELLLLAPGAVQIFYGDESSRPFG PTGSDPLQGTRSDMNWQDVSGKSAANVAHWQKISQFRARHPAIGAGKQTTLSLKQGYGFV REHGDDKVLVIWAGQQ >gi|299856450|gb|ADWV01000001.1| GENE 195 213742 - 214314 494 190 aa, chain + ## HITS:1 COG:ECs4453 KEGG:ns NR:ns ## COG: ECs4453 COG2992 # Protein_GI_number: 15833707 # Func_class: R General function prediction only # Function: Uncharacterized FlgJ-related protein # Organism: Escherichia coli O157:H7 # 1 190 85 274 274 346 99.0 1e-95 MPYITSQNAAIAAERNWLISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLE RVDIIPTSMVATMAAAESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKE SVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQ DNQRLIAAHM >gi|299856450|gb|ADWV01000001.1| GENE 196 214422 - 215600 1007 392 aa, chain - ## HITS:1 COG:xylR_1 KEGG:ns NR:ns ## COG: xylR_1 COG1609 # Protein_GI_number: 16131440 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 265 1 265 265 542 100.0 1e-154 MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML >gi|299856450|gb|ADWV01000001.1| GENE 197 215678 - 216859 1026 393 aa, chain - ## HITS:1 COG:ECs4451 KEGG:ns NR:ns ## COG: ECs4451 COG4214 # Protein_GI_number: 15833705 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type xylose transport system, permease component # Organism: Escherichia coli O157:H7 # 1 393 1 393 393 596 100.0 1e-170 MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFTWTTDGAYLSARNVSNL LRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICDVWLGWPLPLTIIVTLVLG LLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGTTVSPTSAAMSQIGQSYLPAS TGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVVGRQALTAIIVLGAIWLLNDYRG VPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLEAARLSGINVERTKLAVFAINGLMV AIAGLILSSRLGAGSPSAGNIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNG MSMMDVPTFWQYIVKGAILLLAVWMDSATKRRS >gi|299856450|gb|ADWV01000001.1| GENE 198 216837 - 218378 231 513 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 254 483 7 240 329 93 29 1e-17 MPYLLEMKNITKTFGSVKAIDNVCLRLNAGEIVSLCGENGSGKSTLMKVLCGIYPHGSYE GEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENIFLGNEITHNGIMDYDLMT LRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETSV LLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRDAAGMSEDDIITMMVG RELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKRVNDVSFSLKRGEILGIAGLVGAGR TETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQAIAQGIAMVPEDRKRDGIVPVMAVGKN ITLAALNKFTGGISQLDDAAEQKCILESIQQLKVKTSSPDLAIGRLSGGNQQKAILARCL LLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVMHE GKLKANLINHNLTQEQVMEAALRSEHHVEKQSV >gi|299856450|gb|ADWV01000001.1| GENE 199 218456 - 219448 960 330 aa, chain - ## HITS:1 COG:xylF KEGG:ns NR:ns ## COG: xylF COG4213 # Protein_GI_number: 16131437 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type xylose transport system, periplasmic component # Organism: Escherichia coli K12 # 1 330 1 330 330 578 99.0 1e-165 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV PSRLLTPIDVNKNNIKDTVVKDGFHKESEL >gi|299856450|gb|ADWV01000001.1| GENE 200 219814 - 221136 1386 440 aa, chain + ## HITS:1 COG:ECs4448 KEGG:ns NR:ns ## COG: ECs4448 COG2115 # Protein_GI_number: 15833702 # Func_class: G Carbohydrate transport and metabolism # Function: Xylose isomerase # Organism: Escherichia coli O157:H7 # 1 440 1 440 440 901 99.0 0 MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMF GVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFA QMVDVLAAKQEESGVKLLWGTANCFTNPRYGAGAATNPDPEVFSWAATQVVTAMEATHKL GGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTK HQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIALGLFGSVDANRG DAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAM DTMALALKIAARMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHNLSPV HQSGRQEQLENLVNHYLFDK >gi|299856450|gb|ADWV01000001.1| GENE 201 221208 - 222662 945 484 aa, chain + ## HITS:1 COG:xylB KEGG:ns NR:ns ## COG: xylB COG1070 # Protein_GI_number: 16131435 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 484 1 484 484 921 99.0 0 MYIGIDLGTSGVKVILLNEQGEVVASQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALG DQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITG NLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVA KRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVG VGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDW VAKLTGLCNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNE LARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGG DVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLL PLMA >gi|299856450|gb|ADWV01000001.1| GENE 202 222831 - 223172 321 113 aa, chain + ## HITS:1 COG:ECs4446 KEGG:ns NR:ns ## COG: ECs4446 COG4682 # Protein_GI_number: 15833700 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 113 5 117 117 190 100.0 7e-49 MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLD NFFTHICQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVCLFGQMRLFRSV >gi|299856450|gb|ADWV01000001.1| GENE 203 223218 - 223655 509 145 aa, chain + ## HITS:1 COG:ECs4445 KEGG:ns NR:ns ## COG: ECs4445 COG4682 # Protein_GI_number: 15833699 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 145 2 146 146 268 100.0 2e-72 MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQK TVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVA VQKNIRDAGINPPKETQVTQEEYSE >gi|299856450|gb|ADWV01000001.1| GENE 204 223697 - 224692 732 331 aa, chain - ## HITS:1 COG:yiaH KEGG:ns NR:ns ## COG: yiaH COG3274 # Protein_GI_number: 16131432 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 331 1 331 331 605 99.0 1e-173 MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMI SGYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWF FFAIAVIYLVSPLIQVKNVGGKMLLVLMVVIGIIANPNTVPQKIDGFEWLPINLYINGDT FYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYC GPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPI LDIIWIFCATLAASLLLSMLVQRIDRNRLVS >gi|299856450|gb|ADWV01000001.1| GENE 205 224870 - 225166 256 98 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4674 NR:ns ## KEGG: ECO103_4674 # Name: ysaB # Def: putative outer membrane lipoprotein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 98 2 99 99 192 98.0 4e-48 MMNAFFPAMALMVLAGCSTPSPVQKAQRVKVDPLRSLNMEALCKDQAAKRYNTGEQKIDV TAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR >gi|299856450|gb|ADWV01000001.1| GENE 206 225261 - 226172 1204 303 aa, chain + ## HITS:1 COG:ECs4443 KEGG:ns NR:ns ## COG: ECs4443 COG0752 # Protein_GI_number: 15833697 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 303 1 303 303 634 100.0 0 MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRALGPEPMAAAYVQ PSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDN WENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSV YDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPL PLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCN KDK >gi|299856450|gb|ADWV01000001.1| GENE 207 226182 - 228251 2983 689 aa, chain + ## HITS:1 COG:ECs4442 KEGG:ns NR:ns ## COG: ECs4442 COG0751 # Protein_GI_number: 15833696 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Escherichia coli O157:H7 # 1 689 1 689 689 1321 99.0 0 MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVAN LAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRA HVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGI QSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGN ADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPN FIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGT LRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHD GEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFAL RRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEG YTVDTIQAVLARRPTRPADFDARMKAVSHFRTLEAAAALAAANKRVSNILAKSDEVLSDR VNASTLKEPEEIKLAMQVVVLRDKLEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVD DKELRLNRLTMLEKLRELFLRVADISLLQ >gi|299856450|gb|ADWV01000001.1| GENE 208 228531 - 228896 210 121 aa, chain - ## HITS:1 COG:yi5B KEGG:ns NR:ns ## COG: yi5B COG2801 # Protein_GI_number: 16131429 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 121 163 283 283 234 93.0 3e-62 MNMVENMLDQAFKKLKPHEHPILHSDQGWQYRMRRYQNILKEQGITQSMSRKGNCLDNAV VECFFGTLKSECFYLDEFSNISELKDAVTEYIDYYNSRRISLKLKGLSPIEYRTQTYVPR V >gi|299856450|gb|ADWV01000001.1| GENE 209 228837 - 229292 124 151 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|10955443|ref|NP_065295.1| ## NR: gi|10955443|ref|NP_065295.1| hypothetical protein R721_05 [Escherichia coli] # 1 95 24 118 118 170 88.0 2e-41 MLVRLKLFECLIEHILDHVHHRSFRQAVRNNFVVEEIYYWRQIQLSPIDCKFSNVGNPLL VWPCSLEIPLENIGGGLPYLSSVGAVSLDLNRCLKREGSHQALNGFMVNPFPVSMERQRY PTVSVTTFILVINLTNTLFNIRILIRLAESL >gi|299856450|gb|ADWV01000001.1| GENE 210 229379 - 229900 206 173 aa, chain - ## HITS:1 COG:yi5A KEGG:ns NR:ns ## COG: yi5A COG2963 # Protein_GI_number: 16131428 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 173 1 173 173 303 94.0 8e-83 MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKG VSADPELRIKVVKAVTEQQMSLNQAAAHFMLAGSGSVAKWLKVYEEHGEAGLRALKIGTK RNITMSVDPEKAALALELSKDRRIEDLERQVRFLEMRLTYLKKLKALAHPAKK >gi|299856450|gb|ADWV01000001.1| GENE 211 229963 - 230175 122 70 aa, chain + ## HITS:1 COG:no KEGG:ECSE_3831 NR:ns ## KEGG: ECSE_3831 # Name: not_defined # Def: small toxic polypeptide # Organism: E.coli_SE11 # Pathway: not_defined # 1 70 1 70 70 132 98.0 4e-30 MPEHHKVSLLLVGNQHRGLGMPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQGSYEL AAFLACNLKE >gi|299856450|gb|ADWV01000001.1| GENE 212 230363 - 230575 301 70 aa, chain - ## HITS:1 COG:ECs4441 KEGG:ns NR:ns ## COG: ECs4441 COG1278 # Protein_GI_number: 15833695 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 70 1 70 70 122 100.0 1e-28 MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAK GPAAGNVTSL >gi|299856450|gb|ADWV01000001.1| GENE 213 230856 - 231146 254 96 aa, chain - ## HITS:1 COG:ECs4440 KEGG:ns NR:ns ## COG: ECs4440 COG2944 # Protein_GI_number: 15833694 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 164 100.0 5e-41 MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSV AMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME >gi|299856450|gb|ADWV01000001.1| GENE 214 231580 - 232290 754 236 aa, chain + ## HITS:1 COG:no KEGG:SBO_3556 NR:ns ## KEGG: SBO_3556 # Name: yiaF # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 1 236 41 276 276 432 99.0 1e-120 MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNTVMRSGERLPTLTADQK KQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGV LAQQLQNAKLQADAAHSALKQTDDLKPVFDQAFTKVVTTPADALQPLIPAAQTFTQQLVM VGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ >gi|299856450|gb|ADWV01000001.1| GENE 215 232340 - 233314 863 324 aa, chain - ## HITS:1 COG:ECs4438 KEGG:ns NR:ns ## COG: ECs4438 COG1052 # Protein_GI_number: 15833692 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 324 5 328 328 642 99.0 0 MKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFAEAESLLGSNENVDAAL LEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVE VAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHH KEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPV VDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAAC AVDNLIDALQGKVEKNCVNPHVAD >gi|299856450|gb|ADWV01000001.1| GENE 216 233418 - 234077 213 219 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 113 214 243 344 347 86 37 1e-15 MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRG KGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSS ATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG VDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL >gi|299856450|gb|ADWV01000001.1| GENE 217 234230 - 236563 1962 777 aa, chain + ## HITS:1 COG:bisC KEGG:ns NR:ns ## COG: bisC COG0243 # Protein_GI_number: 16131422 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 39 777 1 739 739 1516 98.0 0 MANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFP MVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQHKRIREAYGPASIFAGSYGWRSN GVLHKASTLLQRYMALAGGYIGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSD VVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVA PHMGTDVALMLGIAHTLVENGWHDEAFLTRCTTGYAVFASYLLGESDGIAKNAEWAAEIC GVNAAKIRELAALFHQNTTMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLS YHFANGGNPTRRSAVLSSMQGSLPGGCDAVDKIPVARIVEALENPGGAYQHNGMNRHFPD IRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDL TMTGDYSNQHLVPMKQVVPPRYEARNDFDVFAELSERWEKGGYARFTEGKSQLQWLETFY NVARQRGASQQVELPPFAEFWQANQLIEMSENPDSERFIRFADFCRDPLAHPLKTASGKI EIFSQRIADYGYPDCPGHPMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELY AVANREPVTIHPDDAQARGITEGDMVRVWNSRGQILAGAVISEGIKPGVICIHEGAWPDL DLTADGICKNGAVNVLTKDLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS >gi|299856450|gb|ADWV01000001.1| GENE 218 236532 - 236972 491 146 aa, chain - ## HITS:1 COG:yiaC KEGG:ns NR:ns ## COG: yiaC COG0454 # Protein_GI_number: 16131421 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 1 146 1 146 146 280 97.0 7e-76 MIREAQRSELPAILELWLESTTWGHPFIKANYWRDCIPLVRDAYLANAQNWVWEEDGKLL GFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRYPHLMLEVYQKNQPAIDFYRAQGF HIVDCAWQDETQLPTWIMSWPVVQTL >gi|299856450|gb|ADWV01000001.1| GENE 219 236969 - 237532 356 187 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 1 181 1 181 185 141 38 4e-32 MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACF HQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFADFVWSFV NHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGCC CYPGNKP >gi|299856450|gb|ADWV01000001.1| GENE 220 237690 - 238388 542 232 aa, chain + ## HITS:1 COG:ECs4433 KEGG:ns NR:ns ## COG: ECs4433 COG5571 # Protein_GI_number: 15833687 # Func_class: N Cell motility # Function: Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion # Organism: Escherichia coli O157:H7 # 1 232 3 234 234 426 99.0 1e-119 MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGHSTERYTWDSDHQPDYND ILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSM YNEFGDSTTTLTDPLWHASVSSLGWRVDSRLGDLRPWAQISYNQQFGENIWKAQSGLSRM TATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSARF >gi|299856450|gb|ADWV01000001.1| GENE 221 238617 - 239819 1599 400 aa, chain + ## HITS:1 COG:yhjX KEGG:ns NR:ns ## COG: yhjX COG0477 # Protein_GI_number: 16131418 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 399 1 399 402 674 99.0 0 MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLA ISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSNNLMMLWLSAGVLVGLADGAGYLL TLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLETVGLEKTFVIWGAIALVMIV FGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDI AQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFA PLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSIFGSIIA SLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAHI >gi|299856450|gb|ADWV01000001.1| GENE 222 240143 - 240667 532 174 aa, chain + ## HITS:1 COG:STM3640 KEGG:ns NR:ns ## COG: STM3640 COG3539 # Protein_GI_number: 16766926 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 1 173 5 177 178 218 73.0 6e-57 MKKVLFALSALALTSTSVFAADAGDGTVKFTGEIVDAACVVSPDTQKQEVVLGQVNKSVF TAMGDKSTATPFKIKLENCDISTFKNVEISFNGVGDADNSKLVSVSTEPGAATGVGIGIY DNTNTLVDLNTGKSATVLKEGQTVLYFTANYVSTKDAVTTGYGNAEVDFNLTYN >gi|299856450|gb|ADWV01000001.1| GENE 223 240751 - 241437 499 228 aa, chain + ## HITS:1 COG:STM3639 KEGG:ns NR:ns ## COG: STM3639 COG3121 # Protein_GI_number: 16766925 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Salmonella typhimurium LT2 # 4 228 7 232 232 298 69.0 4e-81 MKRISFAVLALLMTAQQCFAGGVALSTTRVIYDGGKKEASLTVENHNKNEEFLIQSWIDD VNGNKKTPFIITPPLFKLDPDKNNVLRIVNIEDTLPKDRESVYWINVKAIPAKSAENENK NVLQIAVRTRLKLFYRPKGLPGSNLEAMKQLRFQRQNNQIVVNNDSAYNLTFNQFSINGQ KIERAGMVLAKGKLNINLPAGTGNAHEVKYSIINDFGVAGEMLTKPIN >gi|299856450|gb|ADWV01000001.1| GENE 224 241461 - 243992 2335 843 aa, chain + ## HITS:1 COG:STM3638 KEGG:ns NR:ns ## COG: STM3638 COG3188 # Protein_GI_number: 16766924 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Salmonella typhimurium LT2 # 1 841 1 841 842 1245 73.0 0 MHWMHLPLYHYRAHFSFSLLALTIASSLPAYGGKFNPKFLENVQGIDQHIDLSVYDSPVG QQIPGKYRVSVFVNEEKMASRTLDFSTASEAKRKASGESLMPCLSRVQLEEMGVRVDSFP ALKMSPPEACVAFDEIIPQATSRFDFNTQTLHLSFPQAAMMMTARGTVDPSRWDEGIPAL LLDYSFSGSNGRNEGTGSSSDSTSDSYYLNLRSGLNVGPWRLRNNSIWNRTDGKNQWDNV GTSLNRAIIPLKSQITLGDTATPGEIFDSVQMRGALLASDDEMLPDSQRGFAPVVRGIAK SNAEVSIEQNGYVIYRTFVQPGAFEINDLYATSGSGDLTVIIKEADGSEQRFIQPFSAVA IFQREGYLKYSLAAGEYRAGNYDSDKPHFGQFTAMYGLPWGMTAYGGALLSADYSALALG LGKNFGTIGAVSVDVTQAKSQLRNNEKEEGQSYRFLYSKSFEGGTDLRLLGYKYSTSGYY TFQEATDVRSDADSDYRRYHKRSQIQGNITQQLGDYGSVYFNMTQQDYWNVDGKENSLSA GYHGHIGRVNYSVAYTWTRSPEWEEDDRLWSFSVSIPLGGAWSSYRMTTDQNGKTSQQAS VSGTLLEDRNLSYNVQQGYTSNGVGYSGSVNMGYMGGSGNIDVGYNYSKDNQQVNYGVRG GVIVHSEGITLSQPLGESLAIVSAPGARGGHVVNSSGVEVDWMGNAVVPYLTPYRETIVE LRSDTLGQNVELQEAFQKVVPTRGAVVRSRFDTRVGYRVLMSLKQANGNAVPFGATAALI DESKPASSIVGEEGQLYISGMPEEGELQVSWGNEQAQRCRVPFRLPENKDNAAIVMVNAV CEK >gi|299856450|gb|ADWV01000001.1| GENE 225 244003 - 245058 555 351 aa, chain + ## HITS:1 COG:STM3637 KEGG:ns NR:ns ## COG: STM3637 COG3539 # Protein_GI_number: 16766923 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 6 351 11 359 359 265 44.0 1e-70 MKIKNLLAGMVLLGTSTFAGNIWAADWGPCQTSNGVAHEYSFDFVQTIQVPSENKAGKIL TQPFALGTKYSAYCECPDPIPDNGVVTYFKGVTLLPEPGTVDGYYKFNNYIDILTKIYVY TQLDIPVPFTDRSNGTAQKECTPYTANNWGTGGKGSISIYISHPFVGQMIIPKTRVASLF GTKKKGVYNDSQPMANVSISGSITVTQGCELAAGTVLDIPFGEYQAHDFKGRAGQPPQNV QKVQKELSFDCNNISDGVKIYLSIDATPNTAYPSAIDLGNADVGAVIEDGKGNILKPNDS NSLLEMNPGSLYEDVKRKATTTITAYPVSTTGKLPAAGDYSGIATIHVELE >gi|299856450|gb|ADWV01000001.1| GENE 226 245064 - 245588 426 174 aa, chain + ## HITS:1 COG:STM3636 KEGG:ns NR:ns ## COG: STM3636 COG3539 # Protein_GI_number: 16766922 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Salmonella typhimurium LT2 # 5 174 7 175 175 176 52.0 2e-44 MKRTILALCLLPLSFSSFAATTDLGPKGTLKFTLKISQGACELVKDSVEVDMGTAVLKKP VRIGTEINPTPFSIGLKNCSEVVRAYVTMDGTPNADDSNLFALDAGGATGVGLKIKTAAG VQQFPENTTPTPVEFAINGDGAHQLNYIASYVPIRADATIGRADATVDFTVQYE >gi|299856450|gb|ADWV01000001.1| GENE 227 245841 - 247532 1660 563 aa, chain + ## HITS:1 COG:yhjW KEGG:ns NR:ns ## COG: yhjW COG2194 # Protein_GI_number: 16131417 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 563 12 574 574 1146 99.0 0 MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWKVVSAVVELAATVLVTF FLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYGIIASVMTTDIDLSKEVVG LNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRSLAVVVLAGIMVWAPIRLLDI QQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAWARVDESSDNNSLLNPAKKFTYQ APQNVDDTYVVFIIGETTRWDHMGIFGYERNTTPKLAQEKNLAAFRGYSCDTATKLSLRC MFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDLYAMQSEMWFYSNTMADNIAYREQIGA EPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLIILHTKGSHFNYTQRYPRSFAQWKPECIG VDSGCTKAQMINSYDNSVTYVDHFISSVIDQVRDKKAIVFYAADHGESINEREHLHGTPR ELAPPEQFRVPMMVWMSDKYLENPANAQAFAQLKKEADMKVPRRHVELYDTIMGCLGYTS PDGGINENNNWCHIPQTKVAAAN >gi|299856450|gb|ADWV01000001.1| GENE 228 248613 - 250220 2195 535 aa, chain + ## HITS:1 COG:dppA KEGG:ns NR:ns ## COG: dppA COG0747 # Protein_GI_number: 16131416 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 535 1 535 535 1091 100.0 0 MRISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPL YNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVF SFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAM DFASILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQID TLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQ KKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAK ALLKEAGLEKGFSIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKR AKDGEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARATDDH NKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE >gi|299856450|gb|ADWV01000001.1| GENE 229 250371 - 251390 355 339 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 66 333 43 310 320 141 29 5e-32 MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK PMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVL AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNP LTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA RAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK >gi|299856450|gb|ADWV01000001.1| GENE 230 251400 - 252302 1333 300 aa, chain + ## HITS:1 COG:ECs4422 KEGG:ns NR:ns ## COG: ECs4422 COG1173 # Protein_GI_number: 15833676 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 300 1 300 300 486 100.0 1e-137 MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLFIAIFANWIAPYNPAEQ FRDALLAPPAWQEGGSMAHLLGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIMGVILG LIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPSIGNAALALTFVALPHYVRLT RAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAPLIVQASLGFSNAILDMAALGFL GMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKLKQ >gi|299856450|gb|ADWV01000001.1| GENE 231 252313 - 253296 576 327 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 3 315 11 324 329 226 40 1e-57 MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYP GRVMAEKLVFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ GGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEP TTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAE EPALNMLADGRQSKCHYPLDDAGRPTL >gi|299856450|gb|ADWV01000001.1| GENE 232 253293 - 254297 798 334 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 3 328 2 329 329 311 47 2e-83 MSTQEATSQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCG KSTLGRLLTMIETPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQ ILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDP DVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRC VEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRERIKLTGELPSPLNPPPGCAFNARCR RRFGPCTQLQPALKDYGGQLVACFAVDQDENPQR >gi|299856450|gb|ADWV01000001.1| GENE 233 254327 - 255598 1154 423 aa, chain - ## HITS:1 COG:ECs4419 KEGG:ns NR:ns ## COG: ECs4419 COG0814 # Protein_GI_number: 15833673 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 423 1 423 423 703 99.0 0 MQHNTLPKHDQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGLKGIWVFITAAIIAYPA TWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVVFDS ASYLKTFGLTDADLSQSLLYKVAIFAVLVAIASGGERLLFKISGPMVVVKVGIIVVFGFA MIPHWNFANITAFPQASVFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKREADKVLATRL ALRTHRISYVTLIAVILFFAFSFTFSISHEEAVSAFEQNISALALAAQVIPGHIIHITST VLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRIIDTKKINSRVLTLAICAFIVITLTIWV SFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKVAQLEKLRGFKAWLILLYGILLCLSPLLK LIE >gi|299856450|gb|ADWV01000001.1| GENE 234 256014 - 256181 91 55 aa, chain + ## HITS:1 COG:no KEGG:G2583_4275 NR:ns ## KEGG: G2583_4275 # Name: ldrD # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 55 26 80 80 108 98.0 7e-23 MNLDHSRIAAKRCHYNTGGYMTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK >gi|299856450|gb|ADWV01000001.1| GENE 235 256467 - 256664 122 65 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3988 NR:ns ## KEGG: EC55989_3988 # Name: ldrD # Def: toxic polypeptide, small # Organism: E.coli_55989 # Pathway: not_defined # 1 65 16 80 80 129 100.0 5e-29 MHLTTPRGPFLHPNNTRIAAKRCHYNTGGYMTLAELGMAFWHDLAAPVIAGILASMIVNW LNKRK >gi|299856450|gb|ADWV01000001.1| GENE 236 256950 - 257147 101 65 aa, chain + ## HITS:1 COG:no KEGG:ECSE_3808 NR:ns ## KEGG: ECSE_3808 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 65 16 80 80 127 100.0 9e-29 MHLTTSRGPFLNLNNSRIAAKRCHYNTGGYMTLAELGMAFWHDLAAPVIAGILASMIVNW LNKRK >gi|299856450|gb|ADWV01000001.1| GENE 237 257234 - 258886 1396 550 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_4904 NR:ns ## KEGG: ECH74115_4904 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 550 10 559 559 1072 100.0 0 MPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPIPRYSLHRLRHW IALPIGFALFWHDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIGAIFVLLVAW LFLSQWIRITVFVVAILLWLNVLTLAGPSFSLWPAGQPTTTVTTTGGNAAATVAATGGAP VVGDMPAQTAPPTTANLNAWLNNFYNAEAKRKSTFPSSLPADAQPFELLVINICSLSWSD IEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQPANNDCYLF DNLSKLGFTQHLMMGHNGQFGGFLKEVRENGGMQTELMDQTNLPVILLGFDGSPVYDDTA VLNRWLDVTEKDKNSRSATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELE KSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVID QPSSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRL NGGDWVPYPQ >gi|299856450|gb|ADWV01000001.1| GENE 238 258910 - 259101 206 63 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4265 NR:ns ## KEGG: ECO103_4265 # Name: bcsF # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 63 1 63 63 104 100.0 9e-22 MMTISDIIEIIVVCALIFFPLGYLARHSLRRIRDTLRLFFAKPRYVKPAGTLRRTEKARA TKK >gi|299856450|gb|ADWV01000001.1| GENE 239 259098 - 260669 892 523 aa, chain - ## HITS:1 COG:no KEGG:B21_03337 NR:ns ## KEGG: B21_03337 # Name: bcsE # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 523 1 523 523 1064 99.0 0 MRDIVDPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVIS MDSDPAKIFQLDDSHGPEKIKLFSMLNHEKGLYYLTRDLQCSIDPHNYLFILVCANNAWQ NIPAERLRSWLDKMNKWSRLNHCSLLVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQ HLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPP LSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRE NTASLRATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQP LKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIM TIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPE QWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS >gi|299856450|gb|ADWV01000001.1| GENE 240 260942 - 261130 235 62 aa, chain + ## HITS:1 COG:no KEGG:SSON_3856 NR:ns ## KEGG: SSON_3856 # Name: yhjR # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 62 1 62 62 108 100.0 7e-23 MNNNEPDTLPDPAIGYIFQNDIVALKQAFSLPDIDYADISQREQLAAALKRWPLLAEFAQ QK >gi|299856450|gb|ADWV01000001.1| GENE 241 261142 - 261894 672 250 aa, chain + ## HITS:1 COG:yhjQ KEGG:ns NR:ns ## COG: yhjQ COG1192 # Protein_GI_number: 16131406 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Escherichia coli K12 # 9 250 1 242 242 475 99.0 1e-134 MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWAR AMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHWQTRLSDICSGLQQLKASGRYQW ILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILINNFRIGSQVQ DDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYS GLKTPVGSAS >gi|299856450|gb|ADWV01000001.1| GENE 242 261891 - 264509 2433 872 aa, chain + ## HITS:1 COG:yhjO KEGG:ns NR:ns ## COG: yhjO COG1215 # Protein_GI_number: 16131405 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 872 17 888 888 1808 99.0 0 MSILTRWLLIPPVNARLIGRYRDYRRHGASAFSATLGCFWMILAWIFIPLEHPRWQRIRA EHKNLYPHINASRPRPLDPVRYLIQTCWLLIGTSRKETPKPRRRAFSGLQNIRGRYHQWM NELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSLILALICVTQPFNPLAQFIFL MLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAE TYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVDIFVPTYNEDLNVVKNTIYASLGID WPKDKLNIWILDDGGREEFRQFAQNVGVKYIARTTHEHAKAGNINNALKYAKGEFVSIFD CDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQ DGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAA GLATESLSAHIGQRIRWARGMVQIFRLDNPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIF LTAPLAFLLLHAYIIYAPALMIALFVLPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWY IAPPTLVALINPHKGKFNVTAKGGLVEEEYVDWVISRPYIFLVLLNLVGAAVGIWRYFYG PPTEMLTVVVSMVWVFYNLIVLGGAVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCT VQDFSDGGLGIKINGQAQILEGQKVNLLLKRGQQEYVFPTQVARVMGNEVGLKLMPLTTQ QHIDFVQCTFARADTWALWQDSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRV LTSLVSWVVSFIPRRPERSETAQPSDQALAQQ >gi|299856450|gb|ADWV01000001.1| GENE 243 264520 - 266859 2467 779 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3979 NR:ns ## KEGG: EC55989_3979 # Name: bcsB # Def: cellulose synthase regulator protein # Organism: E.coli_55989 # Pathway: not_defined # 1 779 1 779 779 1516 100.0 0 MKRKLFWICAVAMGMSAFPSFMTQATPATQPLINAEPAVAAQTEQNPQVGQVMPGVQGAD APVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGMRSDEVVTKAMLNLEYTPS PSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPINPLFITDFNRVRLEFVGHYQD VCENPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPVPFFDPRDNRTNTLPMVFAGAPD VGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRNAIVFATNDKRPDFLRDHPAVKAPV IEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQGNILFRGESVVVNEVKPLLPRKPYDA PNWVRTDRPVTFGELKTYEEQLQSSGLEPAAINVSLNLPPDLYLMRSTGIDMDINYRYTM PPVKDSSRMDISLNNQFLQSFNLSSKQEANRLLLRIPVLQGLLDGKTDVSIPALKLGATN QLRFDFEYMNPMPGGSVDNCITFQPVQNHVVIGDDSTIDFSKYYHFIPMPDLRAFANAGF PFSRMADLSQTITVMPKAPNEAQMETLLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDAD IMIIGGIPDKLKDDKQIDLLVQATESWVKTPMRQTPFPGIVPDESDRAAETQSTLTSSGA MAAVIGFQSPYNDQRSVIALLADSPRGYEMLNDAVNDSGKRATMFGSVAVIRESGINSLR VGDVYYVGHLPWFERLWYALANHPILLAVLAAISVILLAWVLWRLLRIISRRRLNPDNE >gi|299856450|gb|ADWV01000001.1| GENE 244 266866 - 267972 1133 368 aa, chain + ## HITS:1 COG:ECs4411 KEGG:ns NR:ns ## COG: ECs4411 COG3405 # Protein_GI_number: 15833665 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase Y # Organism: Escherichia coli O157:H7 # 1 368 1 368 368 724 99.0 0 MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYG MFFALAANDRVAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVW MAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNP SYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLIS SYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGF SAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW GQECANSH >gi|299856450|gb|ADWV01000001.1| GENE 245 267954 - 271427 3258 1157 aa, chain + ## HITS:1 COG:ZyhjLm KEGG:ns NR:ns ## COG: ZyhjLm COG0457 # Protein_GI_number: 15804991 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Escherichia coli O157:H7 EDL933 # 1 1157 1 1154 1154 2120 98.0 0 MRKFTLNIFTLSLGLAVMPMVEAAPTAQQQLLEQVRLGEATHREDLVQQSLYRLELIDPN NPDVVAARFRSLLRQGDIDGAQKQLDRLSQLAPSSNAYKSSRTTMLLSTPDGRQALQQAR LQATTGHAEEAVASYNKLFNGAPPEGDIAVEYWSTVAKIPARRGEAINQLKRINADAPGN TGLQNNLALLLFSSDRRDEGFAVLEQMAKSNAGREGASKIWYGQIKDMPVSDASVSALKK YLSIFSDGDSVAAAQSQLAEQQKQLADPAFRARAQGLAAVDSGMAGKAIPELQQAVRANP KDSEALGALGQAYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDA ALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDSGNTN AVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQA AALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKPNDPEQVYAYGLYLS GHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRESGKEAEAEAMLRQQP PSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPTNADAILGLTEVDIAAGDTAAARSQL AKLPATDNASLNTQRRVALAQAQLGDTAAAQQTFNKLIPQAKSQPPSMESAMVLRDGAKF EAQAGDPKQALETYKDAMVASGVTTTRPQDNDTFTRLTRNDEKDDWLKRGVRSDAADLYR QQDLNVTLEHDYWGSSGTGGYSDLKAHTTMLQVDAPYSDGRMFFRSDFVNMNVGSFSTNA DGKWDDNWGTCTLQDCSGNRSQSDSGASVAVGWRNDVWSWDIGTTPMGFNVVDVVGGISY SDDIGPLGYTVNAHRRPISSSLLAFGGQKDSPSNTGKKWGGVRADGVGLSLSYDKGEANG VWASLSVDQLTGKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDKDLSGYSLG QGGYYSPQEYLSFAIPVMWRERTENWSWELGASGSWSHSRTKTMPRYPLMNLIPTDWQEE AARQSNDGGSSQGFGYTARALLERRVTSNWFVGTAIDIQQAKDYAPSHFLLYVRYSAAGW QGDMDLPPQPLIPYADW >gi|299856450|gb|ADWV01000001.1| GENE 246 271548 - 273497 2093 649 aa, chain + ## HITS:1 COG:ECs4409_3 KEGG:ns NR:ns ## COG: ECs4409_3 COG2200 # Protein_GI_number: 15833663 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 # 387 649 1 263 263 508 99.0 1e-143 MVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAIL ASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANP QPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIAREL NAIPAQELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNK ALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMIL AQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTA EQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQV EMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQER GIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRP LRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQS LNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK >gi|299856450|gb|ADWV01000001.1| GENE 247 273680 - 274966 1551 428 aa, chain + ## HITS:1 COG:dctA KEGG:ns NR:ns ## COG: dctA COG1301 # Protein_GI_number: 16131400 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Escherichia coli K12 # 1 428 1 428 428 733 100.0 0 MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKLIKMIIAPVIFCTVVTG IAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPGAGMNVDPATLDAKAVAVY ADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLFGFALHRLGSKGQLIFNVIES FSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQLGQLIICFYITCILFVVLVLGS IAKATGFSIFKFIRYIREELLIVLGTSSSESALPRMLDKMEKLGCRKSVVGLVIPTGYSF NLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLIVLLLSSKGAAGVTGSGFIVLAATLSA VGHLPVAGLALILGIDRFMSEARALTNLVGNGVATIVVAKWVKELDHKKLDDVLNNRAPD GKTHELSS >gi|299856450|gb|ADWV01000001.1| GENE 248 275229 - 276683 1606 484 aa, chain + ## HITS:1 COG:ECs4407 KEGG:ns NR:ns ## COG: ECs4407 COG0612 # Protein_GI_number: 15833661 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Escherichia coli O157:H7 # 1 484 15 498 498 895 99.0 0 MMATAGYVQADALQPDPAWQQGTLSNGLQWQVLTTPQRPSDRVEIRLLVNTGSLTESTQQ SGYSHAIPRIALTQSGGLDAAQARSLWQQGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDL LKEALSYLANATGKLTITPETINHALQSQDMVATWPADTKEGWWRYRLKGSTLLGHDPAD PLKQPVEAEKIKDFYQKWYTPDAMTLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPT LSPLRAEAVSIMTDAVRQDRLSIMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALS ASNSKDIGLGFDCRVLYLRAQCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNAL VAQKKLELQKLFAAYARADTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLN QDLRQQLSNDMALILLQPKGEPEFNMKALQAAWDQIMAPSTAAAATSVATDDVHPEVTDI PPAQ >gi|299856450|gb|ADWV01000001.1| GENE 249 276779 - 277708 1009 309 aa, chain - ## HITS:1 COG:ECs4406 KEGG:ns NR:ns ## COG: ECs4406 COG0524 # Protein_GI_number: 15833660 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 309 74 382 382 626 99.0 1e-179 MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFS QQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEQSAA ICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANGGKVIFDNNYRPRLWASKEET QQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAG EGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYRGA IIPREAMPA >gi|299856450|gb|ADWV01000001.1| GENE 250 277940 - 278707 639 255 aa, chain + ## HITS:1 COG:yhjH KEGG:ns NR:ns ## COG: yhjH COG2200 # Protein_GI_number: 16131397 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 1 255 2 256 256 506 99.0 1e-143 MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVAHPLNPS QRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKI LRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKI ARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLS RPAPIETLNTAVLAL >gi|299856450|gb|ADWV01000001.1| GENE 251 278777 - 280837 1724 686 aa, chain + ## HITS:1 COG:yhjG KEGG:ns NR:ns ## COG: yhjG COG2982 # Protein_GI_number: 16131396 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Escherichia coli K12 # 1 686 6 691 691 1323 99.0 0 MSKAGKITAAISVAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVW ERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPW IKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVS KADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGML ALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLP DTPPFETDGRLVAKVDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQ LRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDADVRFK GRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQGRADIQ ARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNL MEIVGLNVGNYIVGAIFGDDEVRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASF ASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPA AALLALISPSEGEANQCRTILSQMKK >gi|299856450|gb|ADWV01000001.1| GENE 252 281071 - 282393 1678 440 aa, chain - ## HITS:1 COG:yhjE KEGG:ns NR:ns ## COG: yhjE COG0477 # Protein_GI_number: 16131395 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 440 1 440 440 683 100.0 0 MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATAAVIVFPHIFFPQGDPT AATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLLTMGISTVVIGLLPGYATI GIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRALYGSFPQLGAPIGFFFANGT FLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVSLHESPVFEKVAKAKKQVKIPLG TLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFSTAAAPVGLGLPRNEVLWMLMMAVIG FGVMVPVAGLLADAFGRRKSMVIITTLIILFALFAFNPLLGSGNPILVFAFLLLGLSLMG LTFGPMGALLPELFPTEVRYTGASFSYNVASILGASVAPYIAAWLQTNYGLGAVGLYLAA MAGLTLIALLLTHETRHQSL >gi|299856450|gb|ADWV01000001.1| GENE 253 282804 - 283817 1096 337 aa, chain - ## HITS:1 COG:ECs4402 KEGG:ns NR:ns ## COG: ECs4402 COG1295 # Protein_GI_number: 15833656 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 337 1 337 337 663 100.0 0 MTQENEIKRPTQDLEHEPIKQLDNSEKGGKVSQALETVTTTAEKVQRQPVIAHLIRATER FNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNISDPTLA ATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQEKFWV KYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGLAISIFA NYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMKSPSGAAFGSVL GLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGKTQP >gi|299856450|gb|ADWV01000001.1| GENE 254 283866 - 284747 716 293 aa, chain - ## HITS:1 COG:yhjC KEGG:ns NR:ns ## COG: yhjC COG0583 # Protein_GI_number: 16131393 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 293 31 323 323 585 99.0 1e-167 MQLFIKVAELESFSRAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYY QRAKDVLSNLSELDGLFQQDATSISGKLRIDIPPGIAKSLLLPRLSEFLYLHPGIELELS SHDRPVDILHDGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFGYPQSPDDLTS HAIVRYTPHLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLAAGLAGLGIIQIPRIAV REALRAGRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVMKEHLD >gi|299856450|gb|ADWV01000001.1| GENE 255 285285 - 285887 451 200 aa, chain + ## HITS:1 COG:yhjB KEGG:ns NR:ns ## COG: yhjB COG2197 # Protein_GI_number: 16131392 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli K12 # 1 200 1 200 200 394 100.0 1e-110 MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEF CYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMG MMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESL YRRLEVKNRTQAAMMLNISS >gi|299856450|gb|ADWV01000001.1| GENE 256 285938 - 287587 1611 549 aa, chain - ## HITS:1 COG:ECs4399 KEGG:ns NR:ns ## COG: ECs4399 COG1626 # Protein_GI_number: 15833653 # Func_class: G Carbohydrate transport and metabolism # Function: Neutral trehalase # Organism: Escherichia coli O157:H7 # 1 549 1 549 549 1109 99.0 0 MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMIEGLPASDALTPADRYL ELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRDFDLRKFVENHFWLPEVYS REYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQSYIVPGGRFSETYYWDSYFT MLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYYLSRSQPPVFALMVELFEEDGVR GARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMPDGSLLNRYWDDRDTPRDESWLEDV ETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLFKLES AIANISALKGEKETEALFRQKASARRDAVNRYLWDDENGIYRDYDWRREQLALFSAAAIV PLYVGMANHEQADRLANAVRSRLLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMY GDDLLGDEIARSWLKTVNQFYLEQHKMIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVR RLIGLYGEP >gi|299856450|gb|ADWV01000001.1| GENE 257 287992 - 289389 1234 465 aa, chain + ## HITS:1 COG:yhjA KEGG:ns NR:ns ## COG: yhjA COG1858 # Protein_GI_number: 16131390 # Func_class: P Inorganic ion transport and metabolism # Function: Cytochrome c peroxidase # Organism: Escherichia coli K12 # 1 465 1 465 465 968 99.0 0 MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAVSENNKVLGFLREKGCD YCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAALLADKPVSQSDLNKIEWVM QYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYASNDTAPEHRNEPVQPIPQKL PTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVF NSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKAQFLEVYPQG FSGENITDAIAEFEKTLITPDSPFDKWLRGDENALTAQQKKGYQLFKDNKCATCHGGIIL GGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNVALTAPYFHRGDVP TLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQDKQ >gi|299856450|gb|ADWV01000001.1| GENE 258 289521 - 289667 82 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAFAPKRESSSSERKSVNSFWSISNSLNLFEGNKKVGFIRNGSKALQA >gi|299856450|gb|ADWV01000001.1| GENE 259 289600 - 291000 1651 466 aa, chain + ## HITS:1 COG:gadA KEGG:ns NR:ns ## COG: gadA COG0076 # Protein_GI_number: 16131389 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Escherichia coli K12 # 1 466 1 466 466 1000 100.0 0 MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNL ATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVG TNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREI PMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDM HIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELV FNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKL GPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVV MRIMCRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQNSFKHT >gi|299856450|gb|ADWV01000001.1| GENE 260 291430 - 292194 86 254 aa, chain + ## HITS:1 COG:ECs4396 KEGG:ns NR:ns ## COG: ECs4396 COG2207 # Protein_GI_number: 15833650 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 254 21 274 274 499 98.0 1e-141 MVNGEYRYFNGGDLVFADASQIRVDKCVENFVLVSRDTLSLFLPMLKEEALNLHAHKKIS SLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQ PNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQGLPNRDSAASIVAQG NFYGTDRSAEGIRL >gi|299856450|gb|ADWV01000001.1| GENE 261 292562 - 293290 138 242 aa, chain + ## HITS:1 COG:ECs4395 KEGG:ns NR:ns ## COG: ECs4395 COG2207 # Protein_GI_number: 15833649 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 242 1 242 242 469 99.0 1e-132 MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFCSPDTRRLDIDELTVCH YLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMF SHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCF SKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGT FS >gi|299856450|gb|ADWV01000001.1| GENE 262 293435 - 293716 128 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293412945|ref|ZP_06655613.1| ## NR: gi|293412945|ref|ZP_06655613.1| predicted protein [Escherichia coli B354] # 1 84 1 84 93 143 100.0 3e-33 MFGIIKLTIHTITGMWVSIVLFKLMTNGWSGFYFQCCVLSLVFLTVSWLLSGEWLAGKSK AEPSRSTLLSFTRYAFLKRAKRCSTTTKKTGTK >gi|299856450|gb|ADWV01000001.1| GENE 263 293653 - 296766 3301 1037 aa, chain - ## HITS:1 COG:ECs4394 KEGG:ns NR:ns ## COG: ECs4394 COG0841 # Protein_GI_number: 15833648 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 1037 1 1037 1037 1897 99.0 0 MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTITVSATYPGADAQTVEDS VTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDIAQVQVQNKLQLAMPSLPE AVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVASNIKDPLSRTAGVGSVQLFGS EYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQLGGMPQAADQQLNASIIVQTRL QTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYSTVARYNGKPAAGIAIKLATGANAL DTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIEISIQEVFKTLVEAIILVFLVMYLFLQ NFRATIIPTIAVPVVILGTFAILSAVGFTINTLTMFGMVLAIGLLVDDAIVVVENVERVI AEDKLPPKEATHKSMGQIQRALVGIAVVLSAVFMPMAFMSGATGEIYRQFSITLISSMLL SVFVAMSLTPALCATILKAAPEGGHKPNALFARFNTLFEKSTQHYTDSTRSLLRCTGRYM VVYLLICAGMAVLFLRTPTSFLPEEDQGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKE KDNVQSVFTVGGFGFSGQGQNNGLAFISLKPWSERVGEENSVTAIIQRAMIALSSINKAV VFPFNLPAVAELGTASGFDMELLDNGNLGHEKLTQARNELLSLAAQSPDQVTGVRPNGLE DTPMFKVNVNAAKAEAMGVALSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRML PDNINQWYVRNASGTMAPLSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMK FMADLVAKLPAGVGYSWTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVM LVVPLGVVGALLATDLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIE AIIEAARMRLRPILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFV PVFFVVVEHLFARFKKA >gi|299856450|gb|ADWV01000001.1| GENE 264 296791 - 297948 982 385 aa, chain - ## HITS:1 COG:yhiU KEGG:ns NR:ns ## COG: yhiU COG0845 # Protein_GI_number: 16131385 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 1 385 1 385 385 687 100.0 0 MNRRRKLLIPLLFCGAMLTACDDKSAENAAAMTPEVGVVTLSPGSVNVLSELPGRTVPYE VAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELNSAKGSLAKALSTASNARI TFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAVEQATINLQYANVTSPITGVS GKSSVTVGALVTANQADSLVTVQRLDPIYVDLTQSVQDFLRMKEEVASGQIKQVQGSTPV QLNLENGKRYSQTGTLKFSDPTVDETTGSVTLRAIFPNPNGDLLPGMYVTALVDEGSRQN VLLVPQEGVTHNAQGKATALILDKDDVVQLREIEASKAIGDQWVVTSGLQAGDRVIVSGL QRIRPGIKARAISSSQENASTESKQ >gi|299856450|gb|ADWV01000001.1| GENE 265 298287 - 298814 372 175 aa, chain - ## HITS:1 COG:ECs4392 KEGG:ns NR:ns ## COG: ECs4392 COG2771 # Protein_GI_number: 15833646 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 175 1 175 175 302 100.0 2e-82 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF >gi|299856450|gb|ADWV01000001.1| GENE 266 299613 - 300185 520 190 aa, chain - ## HITS:1 COG:ECs4391 KEGG:ns NR:ns ## COG: ECs4391 COG3247 # Protein_GI_number: 15833645 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 293 100.0 1e-79 MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFVSGDILSTVVGALLICS GIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPELGIFAIAAFIAGLFCVAGV IRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVSVTLVSTLVGIELIFSAASLF SFASLFVKQQ >gi|299856450|gb|ADWV01000001.1| GENE 267 300440 - 300772 486 110 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3953 NR:ns ## KEGG: EC55989_3953 # Name: hdeA # Def: acid-resistance protein # Organism: E.coli_55989 # Pathway: not_defined # 19 110 19 110 110 157 100.0 7e-38 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM >gi|299856450|gb|ADWV01000001.1| GENE 268 300876 - 301214 321 112 aa, chain + ## HITS:1 COG:no KEGG:SSON_3577 NR:ns ## KEGG: SSON_3577 # Name: hdeB # Def: acid-resistance protein # Organism: S.sonnei # Pathway: not_defined # 1 112 1 112 112 216 100.0 1e-55 MGYKMNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFIDLNPKAMTPVAWW MLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQASNDLPN >gi|299856450|gb|ADWV01000001.1| GENE 269 301278 - 301925 631 215 aa, chain + ## HITS:1 COG:ECs4388 KEGG:ns NR:ns ## COG: ECs4388 COG1285 # Protein_GI_number: 15833642 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 381 100.0 1e-106 MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLD HVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGI YGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSMLDWFKQQKIKTDLVSLQENED HEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS >gi|299856450|gb|ADWV01000001.1| GENE 270 301967 - 302470 333 167 aa, chain - ## HITS:1 COG:yhiF KEGG:ns NR:ns ## COG: yhiF COG2771 # Protein_GI_number: 16131379 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli K12 # 1 167 10 176 176 298 100.0 3e-81 MFFTAMKNILSKGNVVHIQNEEEIDVMLHQNAFVIIDTLMNNVFHSNFLTQIERLKPVHV IIFSPFNIKRCLGKVPVTFVPRTITIIDFVALINGSYCSVPEAAVSLSRKQHQVLSCIAN QMTTEDILEKLKISLKTFYCHKHNIMMILNLKRINELVRHQHIDYLV >gi|299856450|gb|ADWV01000001.1| GENE 271 302653 - 303219 643 188 aa, chain - ## HITS:1 COG:ECs4377 KEGG:ns NR:ns ## COG: ECs4377 COG3065 # Protein_GI_number: 15833631 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Starvation-inducible outer membrane lipoprotein # Organism: Escherichia coli O157:H7 # 1 188 12 199 199 381 100.0 1e-106 MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQPGLYVGQQARFGGKVI NVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFLDPVNYRNHFVTILGTIQG EQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYGYGAFWPEPGWGAPYYTNAVS QVTPELVK >gi|299856450|gb|ADWV01000001.1| GENE 272 303843 - 304688 147 281 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_3990 NR:ns ## KEGG: EcE24377A_3990 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 281 1 281 281 510 100.0 1e-143 MSIDFTPGIINTYHGDIYNCTTNTDNVKTPDTPKWPCDNWEEQQPINSIFSGEGYNPEQF DLAQQQLQQINACHTNTTYTNADYSKVVVQLVSLINNIETISSTPLTQQTQSILNQINNI RYEKNKSAECRIIVVANPKPDKAIITKISVEEGIPITFSVQTMFSDTNFIAEQRADLPTN IKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLN INFTDANLGDTIFYIKNTLPPNYIKMDNILTNKSKVYFQHY >gi|299856450|gb|ADWV01000001.1| GENE 273 305269 - 306282 519 337 aa, chain - ## HITS:1 COG:Cj1560 KEGG:ns NR:ns ## COG: Cj1560 COG0701 # Protein_GI_number: 15792865 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Campylobacter jejuni # 47 336 1 274 274 163 34.0 5e-40 MSSWLAMLQDAAEMFVFLAVELSLLFIVISAGVSLIRQKVPDHKIQQMMGARKGRGYLLA ALLGAVTPFCSCSTIPMLRGLLSAKAGFGPTLTFLFVSPLLNPIIVGLMWVTFGWKVTLL YAIIATGVSVLASIILDSLGFERHIIASKSSSANCCAPAKASAKTLPGTTYTPIEVSCCS PTAKAIEKPVVNCCNTKAVASINPIKLATKDALQQFKDVLPYLLLGVLIGSFIYGFIPSA WIAAHAGADNPFAIPLSAVVGIPLYIRAEAVIPLASVLMTKGMGLGALMALIIGSAGASL TEVILLKSMFRMPMIAAFLTVILGMAILMGYLTQLLF >gi|299856450|gb|ADWV01000001.1| GENE 274 306389 - 306685 345 98 aa, chain + ## HITS:1 COG:mll2166 KEGG:ns NR:ns ## COG: mll2166 COG0640 # Protein_GI_number: 13472009 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mesorhizobium loti # 1 95 1 95 106 102 51.0 2e-22 MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGIPGSTLSHHISALVSVG LVKQNRESRTLMCVSQYAMLEAIIEFLREECCVNSKIA >gi|299856450|gb|ADWV01000001.1| GENE 275 306819 - 307244 580 141 aa, chain - ## HITS:1 COG:arsC KEGG:ns NR:ns ## COG: arsC COG1393 # Protein_GI_number: 16131375 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli K12 # 1 141 1 141 141 271 99.0 4e-73 MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIYYLETPPTRDELVKLIADMGISVRALLR KNVEPYEELGLAEDKFTDDRLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLEILPDAQ KGAFSKEDGEKVVDEAGKRLK >gi|299856450|gb|ADWV01000001.1| GENE 276 307257 - 308546 1565 429 aa, chain - ## HITS:1 COG:arsB KEGG:ns NR:ns ## COG: arsB COG1055 # Protein_GI_number: 16131374 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Escherichia coli K12 # 1 429 8 436 436 679 99.0 0 MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAF IAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTP IVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLVNIVSADFFGLGFREYASVMV PVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKAGWVVLLLLLVGFFV LEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAG LTEYLSGVLNVLADNGLWAATLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEA MVYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTISWGYYFRTGIIMTLPVLFVTLAA LALRLSFTL >gi|299856450|gb|ADWV01000001.1| GENE 277 308600 - 308953 236 117 aa, chain - ## HITS:1 COG:arsR KEGG:ns NR:ns ## COG: arsR COG0640 # Protein_GI_number: 16131373 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 117 1 117 117 225 100.0 2e-59 MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLL LDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKVQAIVRNLARQNCSGDSKNICS >gi|299856450|gb|ADWV01000001.1| GENE 278 309492 - 309665 121 57 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3940 NR:ns ## KEGG: EC55989_3940 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 57 3 59 59 97 100.0 1e-19 MHPLTHPLPVTAHALLLDNGILTPARASVNGTTRTSDQDFESVYAHYQSENASELTG >gi|299856450|gb|ADWV01000001.1| GENE 279 309627 - 309776 111 49 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_3983 NR:ns ## KEGG: EcE24377A_3983 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 49 1 49 49 68 97.0 8e-11 MRRDRQWMSKRMHSHSIAWRKRVIDKAIIVLGALIALLELIRFLLQLLN >gi|299856450|gb|ADWV01000001.1| GENE 280 309830 - 311182 502 450 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 5 444 4 442 458 197 31 4e-49 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIR EAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDA KTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAGYIAV ELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNADG SLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYA VGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAR EQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFA VALKMGATKKDFDNTVAIHPTAAEEFVTMR >gi|299856450|gb|ADWV01000001.1| GENE 281 311254 - 312096 926 280 aa, chain - ## HITS:1 COG:ECs4371 KEGG:ns NR:ns ## COG: ECs4371 COG2961 # Protein_GI_number: 15833625 # Func_class: R General function prediction only # Function: Protein involved in catabolism of external DNA # Organism: Escherichia coli O157:H7 # 1 280 1 280 280 555 99.0 1e-158 MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE YLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELH PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI AEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE >gi|299856450|gb|ADWV01000001.1| GENE 282 312299 - 314341 2694 680 aa, chain + ## HITS:1 COG:ECs4370 KEGG:ns NR:ns ## COG: ECs4370 COG0339 # Protein_GI_number: 15833624 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Escherichia coli O157:H7 # 1 680 1 680 680 1368 99.0 0 MTNPLLTPFELPPFSKILPEHVVPAVTKALNDCRENVERVVAQGAPYTWENLCQPLAEVD DVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGDHYA TLNTAQKKAVDNALRDFELSGIGLPIEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKL VTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPSYLPVMTYCDNQALREEMYRAYS TRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFENYAFKSLATKMAENPQQVLDFLTD LAKRARPQGEKELAQLRAFAKAEFGVDELQPWDIAYYSEKQKQHLYSISDEQLRPYFPEN KAVNGLFEVVKRIYGITAKERKDVDVWHPDVRFFELYDENNELRGSFYLDLYARENKRGG AWMDDCVGQMRKADGSLQKPVAYLTCNFNRPVNGKPALFTHDEVITLFHEFGHGLHHMLT RIETAGVSGISGVPWDAVELPSQFMENWCWEPEALAFISGHYETGEPLPKELLDKMLAAK NYQAALFILRQLEFGLFDFRLHAEFRPDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFS HIFAGGYAAGYYSYLWADVLAADAFSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFK RFRGREPQLDAMLEHYGIKG >gi|299856450|gb|ADWV01000001.1| GENE 283 314347 - 315099 773 250 aa, chain + ## HITS:1 COG:ECs4369 KEGG:ns NR:ns ## COG: ECs4369 COG0500 # Protein_GI_number: 15833623 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 483 99.0 1e-136 MQICLIDETGTGDGALSVLAARWGLEHDEDNLMALVLTPEHLELRKRDEPKLGGIFVDFV GGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNP VVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKS ALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGH RFDIYAGTPV >gi|299856450|gb|ADWV01000001.1| GENE 284 315148 - 316617 1603 489 aa, chain - ## HITS:1 COG:yhiP KEGG:ns NR:ns ## COG: yhiP COG3104 # Protein_GI_number: 16131368 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli K12 # 1 489 1 489 489 866 99.0 0 MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQLGFSQEQAFVTFGAFA ALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSLLKPDLIFIALGTIAVGNG LFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIALSLTPVIADRFGYSVTYNLCG AGLIIALLVYIACRGMVKDIGSEPDFRPMSFSKLLYVLLGSVVMIFVCAWLMHNVEVANL VLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNV HHEILGFSINPVSFQALNPFWVVLASPILAGIYTHLGNKGKDLSMPMKFTLGMFMCSLGF LTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMW FLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMLLMVPWLK RMIATPESH >gi|299856450|gb|ADWV01000001.1| GENE 285 316935 - 317369 661 144 aa, chain - ## HITS:1 COG:ECs4367 KEGG:ns NR:ns ## COG: ECs4367 COG0589 # Protein_GI_number: 15833621 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 144 1 144 144 271 100.0 3e-73 MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQK RISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQDFWSKLM SSARQLINTVHVDMLIVPLRDEEE >gi|299856450|gb|ADWV01000001.1| GENE 286 317814 - 318095 224 93 aa, chain + ## HITS:1 COG:no KEGG:G2583_4220 NR:ns ## KEGG: G2583_4220 # Name: uspB # Def: universal stress protein B # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 93 19 111 111 184 100.0 1e-45 MARYFSSLRALLVVLRNCDPLLYQYVDGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDE FIRRCERVRRQFILTSALCGLVVVSLIALMIWH >gi|299856450|gb|ADWV01000001.1| GENE 287 318166 - 319665 1693 499 aa, chain - ## HITS:1 COG:ECs4365 KEGG:ns NR:ns ## COG: ECs4365 COG0306 # Protein_GI_number: 15833619 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Escherichia coli O157:H7 # 1 499 1 499 499 893 100.0 0 MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVF NFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASS SHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRY WSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLV LIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQ PAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGV SADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTY AQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFT LPAAVLLSGGLYWLSLQFL >gi|299856450|gb|ADWV01000001.1| GENE 288 319897 - 321099 1034 400 aa, chain + ## HITS:1 COG:yhiN KEGG:ns NR:ns ## COG: yhiN COG2081 # Protein_GI_number: 16131364 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Escherichia coli K12 # 1 400 1 400 400 807 99.0 0 MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPG AYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEK GNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQF GLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGIVFRENLLFTHRGLSGPAV LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQ IPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVP GLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS >gi|299856450|gb|ADWV01000001.1| GENE 289 321415 - 322422 420 335 aa, chain - ## HITS:1 COG:no KEGG:G2583_4217 NR:ns ## KEGG: G2583_4217 # Name: yhiM # Def: inner membrane protein YhiM # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 335 49 383 383 583 100.0 1e-165 MGLICIALGGFVLESSGQSEYFVAGHVLISLAAICLALFTTAFIIISQLTRGVNTFYNTL FPIIGYAGSIITMIWGWALLAGNDVMADEFVAGHVIFGVGMIAACVSTVAASSGHFLLIP KNAAGSKSDGTPVQAYSSLIGNCLIAVPVLLTLLGFIWSITLLRSADITPHYVAGHVLLG LTAICACLIGLVATIVHQTRNTFSTKEHWLWCYWVIFLGSITVLQGIYVLVSSDASARLA PGIILICLGMICYSIFSKVWLLALVWRRTCSLANRIPMIPVFTCLFCLFLASFLAEMAQT DMGYFIPSRVLVGLGAVCFTLFSIVSILEAGSAKK >gi|299856450|gb|ADWV01000001.1| GENE 290 322851 - 323693 216 280 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_3971 NR:ns ## KEGG: EcE24377A_3971 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 280 1 280 529 557 100.0 1e-157 MKVFHNIFKHFSSNHQDKHSDKVNSHQHHGKVDKTHRAKIVEFDKLDNDSQIDNDFGLHI IYFLQHGHWKVNDRSHQMEKVWFYNSEPSIDIQEYNRFADNTTDTFIFTIIPDNNHVLKL SSPITVTVECKGGYYFINSSGDKSDIIYKVDGLSIIARNFFTLLSGNFKPDWRWDVSKET FTKEKFDSYVKPVFSKIDFYKQCGVINPQNANTAYFGDTDGRVGAVLYALLVSGHIGIRE KGWSLLCELLKHEEMASSAYKHKNNKVLYDLLNTRDMILN >gi|299856450|gb|ADWV01000001.1| GENE 291 323817 - 324440 120 207 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3634 NR:ns ## KEGG: ECIAI1_3634 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 207 323 529 529 422 100.0 1e-117 MRNMEGNKDSRINKNVVVLAGNHEINFNGNYTARLANHKLSAGDTYNLIKTLDVCNYDSE RQVLTSHHGIIRDEEKKCYCLGALQVPFNQMKNPTDPEELANIFNKKHKEHMDDRFIHLI RSNAIASTPVYDNYFNNTTAFRPKPEDIFKCGQTLKKTKQKYGHYGLGVDQHQKIDNYTM GLNSWKIAPNERGDKKGVPGLSCFQPH >gi|299856450|gb|ADWV01000001.1| GENE 292 324702 - 326324 101 540 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3633 NR:ns ## KEGG: ECIAI1_3633 # Name: yhiJ # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 540 1 540 540 1102 100.0 0 MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEVVEKI DDWQIERFQQSIRDDKISFTIQTNHSEKYSMLSDMRAHILRRDNNYQFIVTINSKNYGCY LDNTDINWCSIVYLLNNMTVNDDANDVAVTESYKPVWDWKISQFNVSDIKFETMINPQFA DRTYFSNCSPVDPTSTRPTYFGDTDGSVGAVLYALFATGHLRIMAEGENFLSQLLNIEDE VLNVLLRENFNEQLDTNVNTIISILNRRDIVLESLQPYLVINKDAVTPCTFLGDQTGDRF SNICGDQFIIDLLKRIMSINENVHVLAGNHETNCNGNYMQNFTRMKPLDEDTYAGIKDYP VCFYDPKYKIMANHHGITFDEQRKRYIIGPITVSIDEMTNALDPVELAAIINKKHHAIIN GKKFKTSRAISCRSFNRYFSVSTDYRPKLEALLACSQMLGINQVVAHNGNGGRERIGETG TVLGLNARDSKHAGRMFSMHNCQINPGAGPEITTPWKSYQHEKNRNGLMPLIRRRTMLQL >gi|299856450|gb|ADWV01000001.1| GENE 293 326690 - 327757 1090 355 aa, chain + ## HITS:1 COG:yhiI KEGG:ns NR:ns ## COG: yhiI COG0845 # Protein_GI_number: 16131359 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 1 355 1 355 355 567 99.0 1e-161 MDKSKRHLAWWVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDT ILVKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQS LVNQRQAELDSVAKRHTRSRSLAHRGAISAQQLDDDRAAAESARAALESAKAQVSASKAA IEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVL NMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVET SDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ >gi|299856450|gb|ADWV01000001.1| GENE 294 327754 - 330489 2746 911 aa, chain + ## HITS:1 COG:ZyhiH_1 KEGG:ns NR:ns ## COG: ZyhiH_1 COG1131 # Protein_GI_number: 15804022 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Escherichia coli O157:H7 EDL933 # 18 549 1 532 532 1081 99.0 0 MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISG ARVIEQGNVMVLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHD KAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDP LSRAQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWLVAMNAGEVLATGSAEELRQQTQ SATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIAIEARDLTMRFGSFVAVDHVNFRIP RGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIDTRRRVGYMSQAFSL YNELTVRQNLELHARLFHIPEAEIPARVAEMSERFKLNDVEDVLPELLPLGIRQRLSLAV AVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEAERCDRISLM HAGKVLASGTPQELVEKRGAASLEEAFIAYLQEAAGQSNEAEAPPVVHDTTHAPRQGFSL RRLFSYSRREALELRRDPVRSTLALMGTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQ AWTLNLSGSRYFIEQPPLTSYDELDRRMRAGDITVAIEIPPNFGRDIARGTPVELGVWID GAMPSRAETVKGYVQAMHQSWLQDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPA VIPLLLMMIPSMLSALSVVREKELGSIINLYVTPTTRSEFLLGKQLPYISLGMLNFFLLC GLSVFVFGVPHKGSFLTLTLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQ FSGMIDPVASLEGPGRWIGEVYPTSHFLTIARGTFSKALDLTDLWQLFIPLLIAIPLVMG LSILLLKKQEG >gi|299856450|gb|ADWV01000001.1| GENE 295 330489 - 331613 1153 374 aa, chain + ## HITS:1 COG:yhhJ KEGG:ns NR:ns ## COG: yhhJ COG0842 # Protein_GI_number: 16131357 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli K12 # 1 374 2 375 375 667 99.0 0 MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTPGSLNLAPIAIADMDQS QLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVN VDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVSLETRMRFNPNLDPAWFGGVM AIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPFEIMMAKVWSMGLVVLVVSGLSL VLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQM LSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFT IALLRFRKTIGTMA >gi|299856450|gb|ADWV01000001.1| GENE 296 331686 - 331961 111 91 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4210 NR:ns ## KEGG: ECO103_4210 # Name: not_defined # Def: HicA-like protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 91 1 91 91 177 98.0 1e-43 MRTKVQALRKKQKNTLDQIVKTPVPQGIKWSDIESLVKALGGEIKEGRGSRCKFILNMSV ACFHRPHPSPDTDKGAVESVRDWLLSIGVKP >gi|299856450|gb|ADWV01000001.1| GENE 297 331958 - 332317 475 119 aa, chain + ## HITS:1 COG:ECs4356 KEGG:ns NR:ns ## COG: ECs4356 COG4226 # Protein_GI_number: 15833610 # Func_class: S Function unknown # Function: Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 232 100.0 1e-61 MIKLKTPNSMEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSDSIQGLQKEGELSLREY LEDCKAAGIEPYARTEKIKTFTLRYPESLSERLNNAAAQQQVSVNTYIIETLNERLNHL >gi|299856450|gb|ADWV01000001.1| GENE 298 332437 - 332838 524 133 aa, chain - ## HITS:1 COG:ECs4348 KEGG:ns NR:ns ## COG: ECs4348 COG0864 # Protein_GI_number: 15833602 # Func_class: K Transcription # Function: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 205 100.0 2e-53 MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG VRHGHLQCLPKED >gi|299856450|gb|ADWV01000001.1| GENE 299 332844 - 333650 405 268 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 27 241 294 509 563 160 40 6e-74 MTLLNVCGLSHHYAHGGFSGKHQHQAVLNNVSLTLKSGETVALLGRSGCGKSTLARLLVG LESPSQGNISWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREILREPMRHLL SLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDEAVS NLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQVVGDKL TFSSDAGRVLQNAVLPAFPVRRRTTEKV >gi|299856450|gb|ADWV01000001.1| GENE 300 333647 - 334411 357 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 5 240 9 258 563 142 34 6e-74 MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPAGVRQT AGEILADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTA AIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARIL DLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSQGKIVEQGDVETLFNAPKHTVTRSL VSAHLALYGMELAS >gi|299856450|gb|ADWV01000001.1| GENE 301 334411 - 335244 1064 277 aa, chain - ## HITS:1 COG:ECs4345 KEGG:ns NR:ns ## COG: ECs4345 COG1173 # Protein_GI_number: 15833599 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 461 100.0 1e-130 MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSRLLSPDAQHWLGTDHLG RDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGRVDQATMRVADMFMTFPTS ILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVF VDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVTAPTAEWGVMINDARQYIWTQPL QMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHAH >gi|299856450|gb|ADWV01000001.1| GENE 302 335241 - 336185 254 314 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 68 304 43 310 320 102 26 3e-20 MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNLPPTPEMLASTRTMLGL DQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATLELAGAALVLILLTSVPLG IWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSVYLQWLPAMGYGGWQHIILPA VSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLNDKQTERRHILRNASLPMITAVGM HIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPVIQCFTLMMVVVFVVCNLIVDLLNA ALDPRIRRHEGAHA >gi|299856450|gb|ADWV01000001.1| GENE 303 336185 - 337759 1770 524 aa, chain - ## HITS:1 COG:nikA KEGG:ns NR:ns ## COG: nikA COG0747 # Protein_GI_number: 16131348 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 524 1 524 524 1041 99.0 0 MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLYTPNQMFAQSMVYEPLV KYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFDAEAAAENFRAVLDNRQRH AWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRPFRFIAPSQFKNHETMNGIKA PIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFETGDIDLLY GNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALNTAKAPTNELAVREALNYAVNKKSL IDNALYGTQQVADTLFAPSVPYANLGLKPRQYDPQKAKELLEKAGWTLPAGKDIREKNGQ PLRIELSFIGTDALSKSMAEIIQADMRQIGADVSLIGEEESSIYARQRDGRFGMIFHRTW GAPYDPHAFLSSMRVPSHADFQAQQGLADKPLIDKEIGEVLATHDETQRQALYRDILTRL HDEAVYLPISYISMMVVSKPELGNIPYAPIATEIPFEQIKPVKP >gi|299856450|gb|ADWV01000001.1| GENE 304 337784 - 337960 68 58 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C3992 NR:ns ## KEGG: UTI89_C3992 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 58 1 58 58 102 100.0 3e-21 MAEISMTILSIRHTDYLFWINRWAVGWADQLTESIHCTLSAVSVKGVGVQIARLKFSS >gi|299856450|gb|ADWV01000001.1| GENE 305 337870 - 338457 538 195 aa, chain - ## HITS:1 COG:ECs4342 KEGG:ns NR:ns ## COG: ECs4342 COG2091 # Protein_GI_number: 15833596 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Escherichia coli O157:H7 # 1 195 1 195 195 386 100.0 1e-107 MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHTLSPLPEIIYGEQGKPA FAPETPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWRWLANAVFSLGEHAEMDAV HPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSSLSVSHCQLENLSLAICTPTP FTLTADSVQWIDSVN >gi|299856450|gb|ADWV01000001.1| GENE 306 338512 - 339561 979 349 aa, chain - ## HITS:1 COG:yhhT KEGG:ns NR:ns ## COG: yhhT COG0628 # Protein_GI_number: 16131346 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli K12 # 1 349 28 376 376 581 99.0 1e-166 METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQ RPIAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMS PERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQ IHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIG AVISAVPPMIQVLLFNGIYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLL IWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG >gi|299856450|gb|ADWV01000001.1| GENE 307 339693 - 340430 898 245 aa, chain + ## HITS:1 COG:yhhS KEGG:ns NR:ns ## COG: yhhS COG0477 # Protein_GI_number: 16131345 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 245 15 259 419 405 99.0 1e-113 MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDVMGFSAFWAGLVIS LQYFATLLSRPHAGRYADLLGPKKIVVFGLCGCFLSGLGYLTAGLTASLPVISLLLLCLG RVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAMAMGAPLGVVFYHWGGLQ ALALIIMGVALVAILLAIPRPTVKASKGKPLPFRAVLGRVWLYGMALALASAGFGVIATF ITLFY >gi|299856450|gb|ADWV01000001.1| GENE 308 340540 - 340905 309 121 aa, chain + ## HITS:1 COG:ECs4322 KEGG:ns NR:ns ## COG: ECs4322 COG0477 # Protein_GI_number: 15833576 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 121 299 419 419 196 99.0 7e-51 MICFSVEIIGLLLVGVATMPWMAKIGVLLAGAGFSLVFPALGVVAVKAVPQQNQGAALAT YTVFMDLSLGVTGPLAGLVMSWAGVPVIYLAAAGLVTIALLLTWRLKKRPPEHVPEAASS S >gi|299856450|gb|ADWV01000001.1| GENE 309 340909 - 341466 801 185 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4192 NR:ns ## KEGG: ECO103_4192 # Name: dcrB # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 185 15 199 199 324 100.0 1e-87 MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTD QSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNK AIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIIN TLVIQ >gi|299856450|gb|ADWV01000001.1| GENE 310 341539 - 342204 643 221 aa, chain - ## HITS:1 COG:ECs4320 KEGG:ns NR:ns ## COG: ECs4320 COG1738 # Protein_GI_number: 15833574 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 221 1 221 221 373 100.0 1e-103 MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTV RIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYA LGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIAL VDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS >gi|299856450|gb|ADWV01000001.1| GENE 311 342425 - 342670 344 81 aa, chain + ## HITS:1 COG:ECs4319 KEGG:ns NR:ns ## COG: ECs4319 COG0425 # Protein_GI_number: 15833573 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 81 1 81 81 159 100.0 1e-39 MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFME HELVAKETDGLPYRYLIRKGG >gi|299856450|gb|ADWV01000001.1| GENE 312 342772 - 344970 2199 732 aa, chain - ## HITS:1 COG:ECs4318 KEGG:ns NR:ns ## COG: ECs4318 COG2217 # Protein_GI_number: 15833572 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Escherichia coli O157:H7 # 1 732 1 732 732 1254 99.0 0 MSTPDNHGKKAPQFAAFKPLTTVQNANDCCCDGACSSTPTLSENVSGTRYSWKVSGMDCA ACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGYSLRDEQAADEP QASRLKENLPLITLIVMMAISWGLEQFNHPFGQLAFIATTLVGLYPIARQALRLIKSGSY FAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVSALMALKPETAT RLRNGEREEVAINSLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGD KVPAGATSVDRLVTLEVLSEPGASAIDRILKLIEEAEERRAPIERFIDRFSRIYTPAIMA VALLVTLVPPLLFAASWQEWIYKGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKG GAALEQLGRVTLVAFDKTGTLTVGKPRVTAIHPATGISESELLTLAAAVEQGATHPLAQA IVREAQVAALTIPVAESQRALVGSGIEAQVNGEHVLICAAGKHPADAFAGLINELESAGQ TVVLVVRNDDVLGIIALQDTLRADAATAISELNALGVKGVILTGDNPRAAAAIAGELGLE FKAGLLPEDKVKAVTKLNQHAPLAMVGDGINDAPAMKAAAIGIAMGSGTDVALETADAAL THNHLRGLVQMIELARATHANIRQNITIALGLKGIFLVTTLLGMTGLWLAVLADTGATVL VTANALRLLRRR >gi|299856450|gb|ADWV01000001.1| GENE 313 345044 - 345670 728 208 aa, chain - ## HITS:1 COG:STM3575 KEGG:ns NR:ns ## COG: STM3575 COG3714 # Protein_GI_number: 16766861 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 208 1 208 208 302 91.0 3e-82 MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLC ASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAI IWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHY RRRFRADNAIAAACYFAGHFLIVRSLYL >gi|299856450|gb|ADWV01000001.1| GENE 314 345811 - 346170 351 119 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_4787 NR:ns ## KEGG: ECH74115_4787 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 119 1 119 119 219 100.0 3e-56 MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVLVSNKREKPINDRRSRQ QEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ >gi|299856450|gb|ADWV01000001.1| GENE 315 346173 - 346442 367 89 aa, chain - ## HITS:1 COG:yhhL KEGG:ns NR:ns ## COG: yhhL COG3776 # Protein_GI_number: 16131338 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 89 1 89 89 146 98.0 8e-36 MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGP QMTTAEKVRIFLFGVFELLVWQKKFKVKK >gi|299856450|gb|ADWV01000001.1| GENE 316 346432 - 347028 190 198 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 12 194 13 199 199 77 27 7e-13 MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCF AGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTP HNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAG QVAYRLYQREAQGESDAD >gi|299856450|gb|ADWV01000001.1| GENE 317 347178 - 348674 748 498 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 199 495 21 321 336 292 48 1e-77 MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQTVVEEIVQAQEPVKASEQAVEEQPQAHT EAEAETFAADVVEVTEQVAESEKAQPEAEVVAQPEPVVEETPEPVAIEREELPLPEDVNA EEVSPEEWQAEAETVEIVEAAEEEAAKEEITDEELEAQALAAEAAEEAVIVVPPAEEEQP VEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIAD VGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKTPFVILMV GVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGAD SASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTI DASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIED LRPFKADDFIEALFARED >gi|299856450|gb|ADWV01000001.1| GENE 318 348677 - 349345 348 222 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 216 4 220 223 138 36 3e-31 MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIW FSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSA ALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLF EEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGGVGHE >gi|299856450|gb|ADWV01000001.1| GENE 319 349338 - 350396 1005 352 aa, chain + ## HITS:1 COG:ftsX KEGG:ns NR:ns ## COG: ftsX COG2177 # Protein_GI_number: 16131334 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli K12 # 1 352 1 352 352 687 100.0 0 MNKRDAINHIRQFGGRLDRFRKSVGGSGDGGRNAPKRAKSSPKPVNRKTNVFNEQVRYAF HGALQDLKSKPFATFLTVMVIAISLTLPSVCYMVYKNVNQAATQYYPSPQITVYLQKTLD DDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSGFGGALDMLEENPLPAVAVVIPKL DFQGTESLNTLRDRITQINGIDEVRMDDSWFARLAALTGLVGRVSAMIGVLMVAAVFLVI GNSVRLSIFARRDSINVQKLIGATDGFILRPFLYGGALLGFSGALLSLILSEILVLRLSS AVAEVAQVFGTKFDINGLSFDECLLLLLVCSMIGWVAAWLATVQHLRHFTPE >gi|299856450|gb|ADWV01000001.1| GENE 320 350641 - 351495 1041 284 aa, chain + ## HITS:1 COG:ECs4310 KEGG:ns NR:ns ## COG: ECs4310 COG0568 # Protein_GI_number: 15833564 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 514 100.0 1e-146 MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRF VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM TFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDII RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA >gi|299856450|gb|ADWV01000001.1| GENE 321 351766 - 352869 1428 367 aa, chain + ## HITS:1 COG:ECs4309 KEGG:ns NR:ns ## COG: ECs4309 COG0683 # Protein_GI_number: 15833563 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Escherichia coli O157:H7 # 1 367 20 386 386 706 100.0 0 MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKG GIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI TPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARA VQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAG LKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFV WTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDTVMGPLTWDEKGDLKGFEFGVFDWHAN GTATDAK >gi|299856450|gb|ADWV01000001.1| GENE 322 353068 - 353451 353 127 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4179 NR:ns ## KEGG: ECO103_4179 # Name: yhhK # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 127 1 127 127 247 100.0 8e-65 MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARFNERLLAAVRVTLSGTE GALDSLRVREVTRRRGVGQYLLEEVLRNNPAVSCWWMADAGVEDRGVMTAFMQALGFTAQ QGGWEKR >gi|299856450|gb|ADWV01000001.1| GENE 323 353875 - 354984 1307 369 aa, chain + ## HITS:1 COG:livK KEGG:ns NR:ns ## COG: livK COG0683 # Protein_GI_number: 16131330 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Escherichia coli K12 # 1 369 1 369 369 707 100.0 0 MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKG GIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMI SPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARS VQDGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVG LKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYV WITYAAVQSLATALERTGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWH ADGSSTAAK >gi|299856450|gb|ADWV01000001.1| GENE 324 355032 - 355958 1365 308 aa, chain + ## HITS:1 COG:ECs4304 KEGG:ns NR:ns ## COG: ECs4304 COG0559 # Protein_GI_number: 15833558 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Escherichia coli O157:H7 # 1 308 1 308 308 489 99.0 1e-138 MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAA LMMMGIDTGWLLVAAGFVGAIVIAGAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQN YVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRM GRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGM KAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILVLLVMPTGIL GRPEVEKV >gi|299856450|gb|ADWV01000001.1| GENE 325 355955 - 357232 1512 425 aa, chain + ## HITS:1 COG:livM KEGG:ns NR:ns ## COG: livM COG4177 # Protein_GI_number: 16131328 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 425 1 425 425 717 99.0 0 MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDSASDVRWQWVFIGTAVVFFFQL LRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVAWPFMVSRGTVDIATLTMI YIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPIAGLMAAAAGF LLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLFGLEFSRTAR EGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAWEALREDEIA CRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMG SQFAVILAAILLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLKNGAA KGEQA >gi|299856450|gb|ADWV01000001.1| GENE 326 357229 - 357996 258 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 245 1 230 245 103 25 9e-21 MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGG TILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKT PSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEP AAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEQ IRNNPDVIRAYLGEA >gi|299856450|gb|ADWV01000001.1| GENE 327 357998 - 358711 268 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 216 1 218 245 107 29 6e-22 MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSG RIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWV YELFPRLHERRVQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTI EQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEAVRSAYLGG >gi|299856450|gb|ADWV01000001.1| GENE 328 359107 - 360423 1653 438 aa, chain + ## HITS:1 COG:ECs4299 KEGG:ns NR:ns ## COG: ECs4299 COG1653 # Protein_GI_number: 15833553 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 438 1 438 438 843 99.0 0 MKPLHYTASALALGLALMGNAQAVTTIPFWHSMEGELGKEVDSLAQRFNAENPDYKIVPT YKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIKPVYDVFKEAGIQFDESQF VPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLADYAAKLK ASGMKCGYASGWQGWIQLENFSAWNGLPFASKNNGFDGTDAVLEFNKPEQVKHIAMLEEM NKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLANIREYAKFNYGVGMMPYDADAKDAP QNAIIGGASLWVMQGKNKETYTGVAKFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQ GFYEKNPGADTATRQMLNKPPLPFTKGLRLGNMPQIRVIVDEELESVWTGKKTPQQALDT AVERGNQLLRRFEKSTKS >gi|299856450|gb|ADWV01000001.1| GENE 329 360521 - 361408 1106 295 aa, chain + ## HITS:1 COG:ugpA KEGG:ns NR:ns ## COG: ugpA COG1175 # Protein_GI_number: 16131324 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Escherichia coli K12 # 1 295 1 295 295 485 100.0 1e-137 MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLDNFV TLFHDSYYLDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPA VAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAA LQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSG GPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVVQFRYVESKVRYQ >gi|299856450|gb|ADWV01000001.1| GENE 330 361405 - 362250 961 281 aa, chain + ## HITS:1 COG:ECs4297 KEGG:ns NR:ns ## COG: ECs4297 COG0395 # Protein_GI_number: 15833551 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Escherichia coli O157:H7 # 1 281 1 281 281 482 99.0 1e-136 MIENRPWLTIFSHTMLILGIAVILFPLYVAFVAATLDKQAVYAAPMTLIPGTHLLENIHN IWVNGVGTNSAPFWRMLLNSFVMAFSITLGKITVSMLSAFAIVWFRFPLRNLFFWMIFIT LMLPVEVRIFPTVEVIANLQMLDSYAGLTLPLMASATATFLFRQFFMTLPDELVEAARID GASPMRFFCDIVFPLSKTNLAALFVITFIYGWNQYLWPLLIITDVDLGTTVAGIKGMIAT GEGTTEWNSVMAAMLLTLIPPVVIVLVMQRAFVRGLVDSEK >gi|299856450|gb|ADWV01000001.1| GENE 331 362252 - 363322 1497 356 aa, chain + ## HITS:1 COG:ugpC KEGG:ns NR:ns ## COG: ugpC COG3839 # Protein_GI_number: 16131322 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Escherichia coli K12 # 1 356 14 369 369 691 99.0 0 MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEGD IWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAAR ILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQL HRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPAM NLLTGRVNTEGTHFELDGGIVLPLNGGYRQYAGRKMTLGIRPEHIALSSQAEGGVPLVMD TLEILGADNLAHGRWGEQKLVVRLAHQERPTAGSTLWLHLAENQLHLFDGETGQRV >gi|299856450|gb|ADWV01000001.1| GENE 332 363319 - 364062 784 247 aa, chain + ## HITS:1 COG:ECs4295 KEGG:ns NR:ns ## COG: ECs4295 COG0584 # Protein_GI_number: 15833549 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 496 97.0 1e-140 MSNWPYPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLER TSNGWGVAGELNWQDLLRVDAGSWYSKAFKGEPLPLLSQVAERCREHGMMANIEIKPTTG TGPLTGKMVALAARQLWAGMTPPLLSSFEIDALEAAQLAAPELPRGLLLDEWRDDWRELT ARLGCVSIHLNHKLLDKVRVMQLKDAGLRILVYTVNKPQRAAELLRWGVDCICTDAIDVI GPNFTAQ >gi|299856450|gb|ADWV01000001.1| GENE 333 364049 - 364489 340 146 aa, chain - ## HITS:1 COG:no KEGG:S4297 NR:ns ## KEGG: S4297 # Name: yhhA # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 146 1 146 146 157 100.0 1e-37 MKRLLILTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQTQQIQQKGMLNQQLKT QTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGGMLNSNRNPDSSLNQQHML PERRNGDMLNQPSTPQPDIPLKTIGP >gi|299856450|gb|ADWV01000001.1| GENE 334 364609 - 366351 2016 580 aa, chain + ## HITS:1 COG:ECs4293 KEGG:ns NR:ns ## COG: ECs4293 COG0405 # Protein_GI_number: 15833547 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Escherichia coli O157:H7 # 1 580 1 581 581 1100 98.0 0 MIKPTFLRRVAIAALLSGSCFSAAAAPPAPPVSYGVEEDVFHPVRAKQGMVASVDATATQ VGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSKNGNTTAIDFREMAPAK ATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDG FIVNDALADDLKTYGSEVLPNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPD EFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPISGDYRGYQVYSMPPPSSGGIHI VQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVPWQALTNKAYA KSIADQIDINKAKPSSEIRPGKLAPYESNQTTHYSVVDKDGNAVAVTYTLNTTFGTGIVA GESGILLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPTIVVKDGKTWLVTG SPGGSRIITTVLQMVVNSIDYGMNVAEATNAPRFHHQWLPDELRVEKGFSPDTLKLLEAK GQKVALKEAMGSTQSIMVGPDGELYGASDPRSVDDLTAGY >gi|299856450|gb|ADWV01000001.1| GENE 335 366389 - 366673 252 94 aa, chain - ## HITS:1 COG:no KEGG:B21_03248 NR:ns ## KEGG: B21_03248 # Name: yrhB # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 94 1 94 94 189 100.0 2e-47 MITYHDAFAKANHYLDDADLPVVITLHGRFSQGWYFCFEAREFLETGDEAARLAGNAPFI IDKDSGEIHSLGTAKPLEEYLQDYEIKKATFGLP >gi|299856450|gb|ADWV01000001.1| GENE 336 366873 - 367028 78 51 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3853 NR:ns ## KEGG: EC55989_3853 # Name: yrhD # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 51 4 54 54 89 100.0 4e-17 MEKLTTELHSLSEMDRRHVVSILAEIANGYDDFNDMLIYLEFYPNHKILIS >gi|299856450|gb|ADWV01000001.1| GENE 337 367123 - 367578 224 151 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_3588 NR:ns ## KEGG: ECIAI1_3588 # Name: yrhA # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 151 14 164 164 243 100.0 2e-63 MNDLDYPFEAPLKESFIESIIQIEFNSNSTNCLEKLCNEVSILFKNQPDYLTFLRAMDGF EVNGLRLFSLSIPEPSVKNLFAVNEFYRNNDDFINPDLQERLVIGDDSISIFTYDIKSNF FEIRDNIGTENIFSSFSDFSSFLNEIMDSCS >gi|299856450|gb|ADWV01000001.1| GENE 338 367614 - 368792 293 392 aa, chain - ## HITS:1 COG:yhhZ_1 KEGG:ns NR:ns ## COG: yhhZ_1 COG3157 # Protein_GI_number: 16131314 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Escherichia coli K12 # 1 170 1 170 170 332 98.0 5e-91 MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSLLNNINNTGLGSQFHGI TFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRWEKYYYIQLKGAFLSAIHHQIIQ NQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFLPNSKNQTNNRFKTLNSKAIG RLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEKTAGIAIATASILLTKRSNVDTY TEINSYLGKLRGQQKLLDGIDIIEIIYIKRPSKDLANLRKEFNKTVRKNFLIKLAKTSEA SGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGTNDFENLVLIENEPYHKVFTNMQSRIA KGILVGESKITPWAIPSGSIYPPMKNIMDHTK >gi|299856450|gb|ADWV01000001.1| GENE 339 369029 - 369517 347 162 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229877854|ref|ZP_04497362.1| acetyltransferase, ribosomal protein N-acetylase [Sphaerobacter thermophilus DSM 20745] # 1 162 1 163 179 138 46 4e-31 MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQERLADRPGIKQLVACIDG DVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTV FVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMARVK >gi|299856450|gb|ADWV01000001.1| GENE 340 369750 - 369947 182 65 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3838 NR:ns ## KEGG: ECS88_3838 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 62 20 81 86 123 98.0 2e-27 MRDMPAILAVKYIRQMVTGGAFAEANKGAVDDHDFVLFKVVIYTLAQSGRGSYWSAHNEH KHSRG >gi|299856450|gb|ADWV01000001.1| GENE 341 369849 - 370886 1211 345 aa, chain + ## HITS:1 COG:yhhX KEGG:ns NR:ns ## COG: yhhX COG0673 # Protein_GI_number: 16131312 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 345 1 345 345 702 100.0 0 MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEV LNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVT PYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVAETKPGLPQDGAFYGLGVHTM DQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVKIDYPKFIVHG KKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGVLEYVNDEGVTVREEMKPEMGDYGR VYDALYQTITHGAPNYVKESEVLTNLEILERGFEQASPSTVTLAK >gi|299856450|gb|ADWV01000001.1| GENE 342 371009 - 371704 938 231 aa, chain + ## HITS:1 COG:yhhW KEGG:ns NR:ns ## COG: yhhW COG1741 # Protein_GI_number: 16131311 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Escherichia coli K12 # 1 231 1 231 231 468 99.0 1e-132 MIYFRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVINDDVIEAGQGFGTHPHK DMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPNSTERLHLYQIWIM PEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDMELYRWALLKDEQSVHQIAAE RRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHADSDSEVLLFDLPPV >gi|299856450|gb|ADWV01000001.1| GENE 343 371928 - 372923 1095 331 aa, chain + ## HITS:1 COG:ECs4287 KEGG:ns NR:ns ## COG: ECs4287 COG1609 # Protein_GI_number: 15833541 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 652 99.0 0 MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYIPNRAPDILSN ATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYGYKPEMEQERLESMLSWNI DGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAVGFDNFEAARQMTTAIIARGH CHIAYLGARLDERTIIKQKGYEQAMLDAGLVPYSVMVEQSSSYSSGIELIRQARREYPQL DGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSI GAERLLARIRGESVTPKMLDLGFTLSPGGSI >gi|299856450|gb|ADWV01000001.1| GENE 344 373101 - 373589 531 162 aa, chain + ## HITS:1 COG:ECs4286 KEGG:ns NR:ns ## COG: ECs4286 COG3265 # Protein_GI_number: 15833540 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 325 100.0 3e-89 MGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAA FAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQM LVTQFETLQEPGADETDVLVVDIDQPLEGVVASTIEVIKKGK >gi|299856450|gb|ADWV01000001.1| GENE 345 373593 - 374933 1530 446 aa, chain + ## HITS:1 COG:ECs4285 KEGG:ns NR:ns ## COG: ECs4285 COG2610 # Protein_GI_number: 15833539 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli O157:H7 # 1 446 1 446 446 699 100.0 0 MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGG TLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEV AIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMIL IGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLV GLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHAL QPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATV ACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETL KTWTMMETILGTVGAIVGMIAFQLLS >gi|299856450|gb|ADWV01000001.1| GENE 346 374990 - 375583 608 197 aa, chain - ## HITS:1 COG:ECs4279 KEGG:ns NR:ns ## COG: ECs4279 COG2095 # Protein_GI_number: 15833533 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Escherichia coli O157:H7 # 1 197 1 197 197 294 100.0 9e-80 MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVRELLIALLVMLVFLFAGEK ILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAGEEPFIVPLAIPLVAGPTI LATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFLRLLGEKGVNALERLMGLILV MMATQMFLDGIRMWMKG >gi|299856450|gb|ADWV01000001.1| GENE 347 375775 - 376878 1138 367 aa, chain + ## HITS:1 COG:ECs4278 KEGG:ns NR:ns ## COG: ECs4278 COG0136 # Protein_GI_number: 15833532 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 746 100.0 0 MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDL EALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVIT DGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMG HLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNFGVPLAGSLIPWIDKQLDNGQSR EEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEELLAAHNP WAKVVPNDREITMRELTPAAVTGTLTTPVGRLRKLNMGPEFLSAFTVGDQLLWGAAEPLR RMLRQLA >gi|299856450|gb|ADWV01000001.1| GENE 348 377151 - 379337 2566 728 aa, chain + ## HITS:1 COG:glgB KEGG:ns NR:ns ## COG: glgB COG0296 # Protein_GI_number: 16131306 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Escherichia coli K12 # 1 728 1 728 728 1507 100.0 0 MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDATDVWVIEPKTGRKLAKL ECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFGPLIQEMDAWLLSEGTHLR PYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIP GAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETASLICGLPEKVVQTEERKKANQFD APISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGY QPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHS DPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEG EWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYK WNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKSILDRMP GDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQ RLVRDLNLTYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPV PRHDYRFGINQPGKWREILNTDSMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLAT IWLVREAE >gi|299856450|gb|ADWV01000001.1| GENE 349 379334 - 381307 1470 657 aa, chain + ## HITS:1 COG:glgX KEGG:ns NR:ns ## COG: glgX COG1523 # Protein_GI_number: 16131305 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Escherichia coli K12 # 1 657 1 657 657 1380 99.0 0 MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQEHRYDLPGHSGDIWHGY LPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHAGHNEPDYR DNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKGLTYLHPEIPVEIRGTYKALG HPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETA LDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWT GCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNC PVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAA SSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKE GLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNTYCQDNQLTWLDW SQASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQ ILLSDRFLIAINATLEVTEIVLPAGEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR >gi|299856450|gb|ADWV01000001.1| GENE 350 381325 - 382620 1307 431 aa, chain + ## HITS:1 COG:ECs4275 KEGG:ns NR:ns ## COG: ECs4275 COG0448 # Protein_GI_number: 15833529 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Escherichia coli O157:H7 # 1 431 1 431 431 909 100.0 0 MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSN CINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLLPAQQRMKGENWYRGTADA VTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGV MAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVFDADYLYELLEEDDRDENSSHDF GKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMY DRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLVSGGCVISGSVVVQSVLFSRVRVNSFC NIDSAVLLPEVWVGRSCRLRRCVIDRACVIPEGMVIGENAEEDARRFYRSEEGIVLVTRE MLRKLGHKQER >gi|299856450|gb|ADWV01000001.1| GENE 351 382620 - 384053 1315 477 aa, chain + ## HITS:1 COG:ECs4274 KEGG:ns NR:ns ## COG: ECs4274 COG0297 # Protein_GI_number: 15833528 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Escherichia coli O157:H7 # 1 477 1 477 477 976 100.0 0 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRR DTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEM ASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLP WSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGR LSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSR LTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFS HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASG FVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK >gi|299856450|gb|ADWV01000001.1| GENE 352 384072 - 386519 2894 815 aa, chain + ## HITS:1 COG:glgP KEGG:ns NR:ns ## COG: glgP COG0058 # Protein_GI_number: 16131302 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Escherichia coli K12 # 1 815 1 815 815 1660 100.0 0 MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNATLFAVRDRLVERWLRS NRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGALEAMGLNLEELIDEENDPG LGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGSQKESPDYWLEYGNPWE FKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQIIPGYDTDATNTLRLWSAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSSTIQDILSR HYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRLLIDEHQFSWDDAFEVCCQVFSYTNHT LMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLLGRASIIDESNGRR VRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFTNVTNGVTPRRWLAVANPS LSAVLDEHLGRNWRTDLSLLNELQQHCDFPMVNHAVHQAKLENKKRLAEYIAQQLNVVVN PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKH IIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSN MKFALNGALTIGTLDGANVEMLDHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEEL HQVLTQIGSGVFSPEDPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEW TAKAMLNIANMGYFSSDRTIKEYADHIWHIDPVRL >gi|299856450|gb|ADWV01000001.1| GENE 353 386647 - 388152 986 501 aa, chain + ## HITS:1 COG:ECs4272 KEGG:ns NR:ns ## COG: ECs4272 COG0226 # Protein_GI_number: 15833526 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 500 5 504 505 909 89.0 0 MQNRKWILTSLVMTFFGIPILAQFLAAVIAMLGVGLAGIIEVCNIFITPTIYLLLNIFML ALGALMLFFSGRVWADDSAPEKREIAVWRQCLFLVPALLTLGVWIIALHLADYQFRQMGA GWLADLMLPWLGVLLASLVGGEYWWLVIIPVGAHISFSLGYGWPTRYPLTGTSGLRCRNS LLFILLMLGFVAGYQAYLYKQLNPGVGVRENIDTWAWRPDKLNNQLTPLRGKPQIQFTQN WPRLDGATAAYPIYASAFYALSVLPEDFHEWEYLANSRTPEAYNKIVKGNADIIFVAQPS GGQKKRAEESGITLIYTPFAREAFVFIVNVDNPVNSLTEQQVRDIFSGAITNWRTVGGND QEIQTWQRPEDSGSQTVMQSQVMKNVRMISPQETEVASMMEGMIKVVAEYRNTNNAIGYT FRYYATQMNADKNIKLLAINGIAPTAENIRNGKYPYIVDAFMVTRENMTSETQKLVEWFL TPQGQSLVEDVGYVPMYKTLH >gi|299856450|gb|ADWV01000001.1| GENE 354 388167 - 388877 326 236 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3572 NR:ns ## KEGG: ECIAI1_3572 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 236 1 236 236 492 100.0 1e-138 MELVNTLFASLVGTDPFTGVDITIANCKSAYWDEGIVQQLINQALDEGEKFVGADGLEGL LRYNVTLNIGLTSSNVWPGFSLDTATISRLCACGADFGFDPYISDVPDVQCDLNTTNDLT VQFTAMLNPDERVIIAKRPLKKCESWIEDIYIFQVFKDAWKFHNDNSLRGFRDKQAELKL YARYYTVENCAEESCRDCNSCIRPSFSLSRSAIIRLNVANARFVYQPFTRDQRARG >gi|299856450|gb|ADWV01000001.1| GENE 355 388880 - 389647 228 255 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_3904 NR:ns ## KEGG: EcE24377A_3904 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 255 1 255 255 511 100.0 1e-143 MQPSPAMQALIEQIYHIFRRYPVPQKFVVCCEYCLSQQEQKVLRSTSLRAISYSLINAWN SSPGPDPQNSDEVRYFLPRLLEFVAQGQFDNIHEVFSLRRINLASKENWREDEWKILQRF ACQYMTDWVSGDEAVELQYMLEMFFRADIALAPLLDAINSVPGFWSTVSLACLLNRYCED YIRDNQDDIDNVITTQINAWAFNNQSILKERARQAIENPPKQPEQGTQHQVWVDDWIIDE CLCAMYDASSESPGK >gi|299856450|gb|ADWV01000001.1| GENE 356 389650 - 390255 118 201 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3570 NR:ns ## KEGG: ECIAI1_3570 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 201 1 201 201 350 100.0 2e-95 MIKFRLYIPPVILGFVIVPLLVWPTVIVLAVLIFTLTFLAEIIFSFPLLVVRISLQELQL ELMVEYALFFSVMAGIGWQFSRRTPPELKNRLHCWLVFSPVYFWLILSNFILYISPEKSA LLENIRNFFLTFVWLPLNFSPFWPQPWTDFVGPISAQLGFALGYYCHWCRKNRNQRKKWG DWVTCLSLAILAQGPLFNYLQ >gi|299856450|gb|ADWV01000001.1| GENE 357 390309 - 391814 1877 501 aa, chain - ## HITS:1 COG:glpD KEGG:ns NR:ns ## COG: glpD COG0578 # Protein_GI_number: 16131300 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli K12 # 1 501 1 501 501 985 99.0 0 METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYE FRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGS TGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGMHLPSPYGIRLIKGSHIVVPRVH TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLKVYNTHF KKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRK LAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAARLRRRYPFLTESLARHYART YGSNSELLLGNAGTVSDLGEDFGHEFYEAELKYLVDHEWVRRADDALWRRTKQGMWLNAD QQSRVSQWLVEYTQQKLSLAS >gi|299856450|gb|ADWV01000001.1| GENE 358 392004 - 392330 532 108 aa, chain + ## HITS:1 COG:glpE KEGG:ns NR:ns ## COG: glpE COG0607 # Protein_GI_number: 16131299 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 108 1 108 108 212 100.0 2e-55 MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDNDFDTP VMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPAEVAYGA >gi|299856450|gb|ADWV01000001.1| GENE 359 392375 - 393205 860 276 aa, chain + ## HITS:1 COG:glpG KEGG:ns NR:ns ## COG: glpG COG0705 # Protein_GI_number: 16131298 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Escherichia coli K12 # 1 276 1 276 276 517 98.0 1e-147 MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQAERVRAELARFLENPA DPRYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVVMIACVVVFIAMQILGDQEVM LWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLI SALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAG WFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK >gi|299856450|gb|ADWV01000001.1| GENE 360 393222 - 393980 907 252 aa, chain + ## HITS:1 COG:glpR KEGG:ns NR:ns ## COG: glpR COG1349 # Protein_GI_number: 16131297 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 252 1 252 252 491 100.0 1e-139 MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELAEQNLILRHHGGAALPS SSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTTPEAVAHALLNHSNLRIVT NNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGIDSDGS LLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDAVYTDAPPPVSVMQ VLTDHHIQLELC >gi|299856450|gb|ADWV01000001.1| GENE 361 393962 - 395560 1375 532 aa, chain - ## HITS:1 COG:rtcR KEGG:ns NR:ns ## COG: rtcR COG4650 # Protein_GI_number: 16131296 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Escherichia coli K12 # 1 532 1 532 532 1042 98.0 0 MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRLELLHDARSRSLFETLK RDIASVSPETEVVSVEIELHNPWDFEEVYACLHDFARGYEFQPEKEDYLIHITTGTHVAQ ICWFLLAEARYLPARLIQSSPPRKKEQPRGAGEVTIIDLDLSRYNAIASRFAEERQQTLD FLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRIFELKQARHQFSG AFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQA MLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPG LRQRQEDIEPNLDYEVERHATLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVT RMATFATSGRITLDVVEDEINRLRYNWQESRPSALTALLGAEAENIDLFDRLQLEHVIAL CRQAKSLSAAGRLLFDVSRQGKASVNDADRLRKYLARFGLTWEAVQDQHSSS >gi|299856450|gb|ADWV01000001.1| GENE 362 395749 - 396975 1357 408 aa, chain + ## HITS:1 COG:rtcB KEGG:ns NR:ns ## COG: rtcB COG1690 # Protein_GI_number: 16131295 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 408 1 408 408 845 99.0 0 MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSV IPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQAIETAVPHGRTTGRCKRDK GAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQV WIMLHSGSRGIGNAIGTYFIDLAQKEMQDQLETLPSRDLAYFMEGTEYFDDYLKAVAWAQ LFASLNRDAMMENVVTALQSVTQKTVRQQQTLAMEEINCHHNYVQKEQHFGEEIYVTRKG AVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRA TAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG >gi|299856450|gb|ADWV01000001.1| GENE 363 396988 - 397995 832 335 aa, chain + ## HITS:1 COG:yhgK+J KEGG:ns NR:ns ## COG: yhgK+J COG0430 # Protein_GI_number: 16132255 # Func_class: A RNA processing and modification # Function: RNA 3'-terminal phosphate cyclase # Organism: Escherichia coli K12 # 1 335 5 339 339 607 97.0 1e-174 MIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAAAEICR ATVEGAELGSQRLVFRPGTVRGGEYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGG TDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLG ERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESE NITERFFVVGEKRVSAEVVAAQLVKEVKRYLASPAAVGEYLADQLVLPMALAGAGEFKVA HPSCHLLTNIAVVERFLPVRFGLIETDGVTRVSIE >gi|299856450|gb|ADWV01000001.1| GENE 364 398038 - 400743 2426 901 aa, chain - ## HITS:1 COG:ECs4260 KEGG:ns NR:ns ## COG: ECs4260 COG2909 # Protein_GI_number: 15833514 # Func_class: K Transcription # Function: ATP-dependent transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 901 1 901 901 1679 100.0 0 MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLISQWAAGKNDIG WYSLDEGDNQQERFASYLIAAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWH SPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSRNLPQLGIANLRVRDQLLEIG SQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGWATALQLIALSARQNTHSAHKSA RRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEE IERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQWELAAELPEIHRAAAESWMAQGFPSEA IHHALAAGDALMLRDILLNHAWSLFNHSELSLLEESLKALPWDSLLENPQLVLLQAWLMQ SQHRYGEVNTLLARAEHEIKDIREGTMHAEFNALRAQVAINDGNPDEAERLAKLALEELP PGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL SSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYW QMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARS LRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQ LIQLNTLPELEQHRAQRILREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQRE WQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGVAHRQAAVQHAQKLLKMMGYG V >gi|299856450|gb|ADWV01000001.1| GENE 365 401355 - 403748 2787 797 aa, chain + ## HITS:1 COG:ECs4259 KEGG:ns NR:ns ## COG: ECs4259 COG0058 # Protein_GI_number: 15833513 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Escherichia coli O157:H7 # 1 797 1 797 797 1644 99.0 0 MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPVANQR HVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLA ACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQV GIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDFL RAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAGRKLHELAD YEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKL VKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNG VAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWAND LDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYK RQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDP LVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDG ANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGD KHAFDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFS SDRSIRDYQARIWQAKR >gi|299856450|gb|ADWV01000001.1| GENE 366 403758 - 405842 2024 694 aa, chain + ## HITS:1 COG:malQ KEGG:ns NR:ns ## COG: malQ COG1640 # Protein_GI_number: 16131292 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Escherichia coli K12 # 1 684 1 684 694 1409 99.0 0 MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQRTATKVAVTPVPNVMVY TSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPTKLPEGYHTLTLTQDDQRA HCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWGIGDFGDLKAMLVDVAKRGGS FIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQT LQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMTAFRQFVAEQGDSLFWQAAFDA LHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFCEEHRNDVDFYLWLQWLAYSQFAACWE ISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVGAPPDILGPLGQNWGLPPMDP HIITARAYEPFIELLRANMQNCGALRIDHVMSMLRLWWIPYGETADQGAYVHYPVDDLLS ILALESKRHRCMVIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQS MAVAATHDLPTLRGYWESGDLTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCL PKRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWR RKLSATLETMFADDGVNKLLKDLDRRRRAAAKKK >gi|299856450|gb|ADWV01000001.1| GENE 367 405887 - 407203 1742 438 aa, chain - ## HITS:1 COG:ECs4257 KEGG:ns NR:ns ## COG: ECs4257 COG2610 # Protein_GI_number: 15833511 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli O157:H7 # 1 438 1 438 438 700 100.0 0 MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLDKVIGSIKAGVGGTLGS LALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVVLTGFTVGFALFYEVGFVL MLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGPTAIATIFNADMGKTLLYGTI LAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEEMPSFGVSVWTSLVPVVLMAMRA IAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFTFGLNRGRSMDQINDTLVSSIKIIA MMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNISPLLMAWSIAAVLRIALGSATVAAIT AGGIAAPLIATTGVSPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLTIGETIKSWSMLE TIISVCGLVGCLLLNMVI >gi|299856450|gb|ADWV01000001.1| GENE 368 407564 - 408139 729 191 aa, chain - ## HITS:1 COG:yhgI_2 KEGG:ns NR:ns ## COG: yhgI_2 COG0694 # Protein_GI_number: 16131290 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin-like proteins and domains # Organism: Escherichia coli K12 # 97 191 1 95 95 197 100.0 8e-51 MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDL LTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQIN PQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRDL TEHQRGEHSYY >gi|299856450|gb|ADWV01000001.1| GENE 369 408198 - 408881 284 227 aa, chain - ## HITS:1 COG:yhgH KEGG:ns NR:ns ## COG: yhgH COG1040 # Protein_GI_number: 16131289 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Escherichia coli K12 # 1 227 17 243 243 404 100.0 1e-113 MLTVPGLCWLCRMPLALGHWGICSVCSRATRTDKTLCPQCGLPATHSHLPCGRCLQKPPP WQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVLHARRTTGLQLPDRIVSVP LWQRRHWRRGFNQSDLLCQPLSRWLHCQWDSEAVTRTRATATQHFLSARLRKRNLKNAFR LELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAAAVQVWCLCRTL >gi|299856450|gb|ADWV01000001.1| GENE 370 408919 - 409689 605 256 aa, chain + ## HITS:1 COG:bioH KEGG:ns NR:ns ## COG: bioH COG0596 # Protein_GI_number: 16131288 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 256 1 256 256 516 99.0 1e-146 MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALS LADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGI KPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGL EILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFIS HPVEFCHLLVALKQRV >gi|299856450|gb|ADWV01000001.1| GENE 371 409718 - 410251 392 177 aa, chain - ## HITS:1 COG:yhgA KEGG:ns NR:ns ## COG: yhgA COG5464 # Protein_GI_number: 16131287 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 177 116 292 292 350 98.0 6e-97 MVVLLLFYHGIESPYPYSLCWLDCFADPKLARQLYASAFPLIDVTVMPDDEIMQHRRMAL LELIQKHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQTGDAVRFNDFIDGVAER SPKHKESLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDIMRFTGVSEEELAAASQ >gi|299856450|gb|ADWV01000001.1| GENE 372 410303 - 410596 360 97 aa, chain - ## HITS:1 COG:yhgA KEGG:ns NR:ns ## COG: yhgA COG5464 # Protein_GI_number: 16131287 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 97 1 97 292 198 100.0 2e-51 MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKTLKLESSSFIDDDLRES YSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMR >gi|299856450|gb|ADWV01000001.1| GENE 373 410799 - 411035 214 78 aa, chain - ## HITS:1 COG:no KEGG:SDY_3666 NR:ns ## KEGG: SDY_3666 # Name: yhgG # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 78 1 78 78 136 100.0 3e-31 MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRIQEEPDGCLSGS CKSCPEGKACLREWWALR >gi|299856450|gb|ADWV01000001.1| GENE 374 411035 - 413356 2830 773 aa, chain - ## HITS:1 COG:ZfeoB KEGG:ns NR:ns ## COG: ZfeoB COG0370 # Protein_GI_number: 15803913 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Escherichia coli O157:H7 EDL933 # 1 773 1 773 773 1502 99.0 0 MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGT YSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNLYLTLQLLELGIPCIVALN MLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYAQP LLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAYAGEASQHLDAALARLRNEMDDP ALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDKIVLNRFLGLPIFLFVMYLMFLLAI NIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDWLTIFLAQGLGGGINTVLPLVPQIGMM YLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVGFGCNVPSVMGARTLDAPRER LMTIMMAPFMSCGARLAIFAVFAAAFFGQNGALAVFSLYMLGIVMAVLTGLMLKYTIMRG EATPFVMELPVYHVPHVKSLIIQTWQRLKGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVD NINDSALASVSRVITPVFKPIGVHEDNWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDE EFNPAEFNLGEELFSAIDETWQSLKDTFSLSVLMNPIEASKGDGEMGTGAMGVMDQKFGS AAAAYSYLIFVLLYVPCISVMGAIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQH PTYSLVCILAVILFNIVVIGLLRRARSRVDIELLATRKSVSSCCAASTTGDCH >gi|299856450|gb|ADWV01000001.1| GENE 375 413373 - 413600 259 75 aa, chain - ## HITS:1 COG:ECs4250 KEGG:ns NR:ns ## COG: ECs4250 COG1918 # Protein_GI_number: 15833504 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 147 100.0 6e-36 MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAPLGDPIHIETRRVSLVL RKKDLALLEVEAVSC >gi|299856450|gb|ADWV01000001.1| GENE 376 414038 - 416359 1644 773 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein [Symbiobacterium thermophilum IAM 14863] # 1 743 1 743 764 637 48 0.0 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE AGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALDGARYILMERFAEDAALLAKV RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR >gi|299856450|gb|ADWV01000001.1| GENE 377 416456 - 416932 664 158 aa, chain - ## HITS:1 COG:ECs4248 KEGG:ns NR:ns ## COG: ECs4248 COG0782 # Protein_GI_number: 15833502 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Escherichia coli O157:H7 # 1 158 13 170 170 305 99.0 3e-83 MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDR RVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISI DSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP >gi|299856450|gb|ADWV01000001.1| GENE 378 417160 - 417879 906 239 aa, chain + ## HITS:1 COG:ECs4247 KEGG:ns NR:ns ## COG: ECs4247 COG0745 # Protein_GI_number: 15833501 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 447 100.0 1e-126 MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPG EDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVL RRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPL SRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA >gi|299856450|gb|ADWV01000001.1| GENE 379 417876 - 419228 1232 450 aa, chain + ## HITS:1 COG:envZ KEGG:ns NR:ns ## COG: envZ COG0642 # Protein_GI_number: 16131281 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 450 1 450 450 899 100.0 0 MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTD KLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWAQHYEFLSHQMAQQLGGPT EVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPLFRYTLAIMLLAIGGAWLFIR IQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAG VSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPMEMAD LNAVLGEVIAAESGYEREIETALYPGSIEVKMHPLSIKRAVANMVVNAARYGNGWIKVSS GTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSARTISGTGLGLAIVQRIVDNHNGML ELGTSERGGLSIRAWLPVPVTRAQGTTKEG >gi|299856450|gb|ADWV01000001.1| GENE 380 419304 - 420926 2069 540 aa, chain - ## HITS:1 COG:pckA KEGG:ns NR:ns ## COG: pckA COG1866 # Protein_GI_number: 16131280 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Escherichia coli K12 # 1 540 1 540 540 1117 99.0 0 MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGYERGVLTNLGAVAVDTG IFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETWQHLKGLVTKQLSGKRLFV VDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEELAGFKPDFIVMNGAKCTNPQW KEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEK GDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEI YNAIRRDALLENVTVREDGTIDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFL TADAFGVLPPVSRLTADQTQYHFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQ YAEVLVKRMQAAGAQAYLVNTGWNGTGKRISIKDTRAIIDAILNGSLDNAETFTLPMFNL AIPTELPGVDTKILDPRNTYASPEQWQEKAETLAKLFIDNFDKYTDTPAGAALVAAGPKL >gi|299856450|gb|ADWV01000001.1| GENE 381 421305 - 423029 1311 574 aa, chain + ## HITS:1 COG:no KEGG:G2583_4098 NR:ns ## KEGG: G2583_4098 # Name: yhgE # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 574 1 574 574 981 97.0 0 MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGVPATVAFSSVLLFSVIS FKQKRLWGWLALVFIATLGMSGWLKWQTDGMNPWRAEKALWDFGCYLLLMAMLLLPWIQQ SLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFNTLFFA TDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLAAPLYVFVA AWALWLRVAQYGWTVDRLQGVLAVLVLLVWSLGYFVSIVWRKGQNPVVLQGKVNLAVSLL VLVILVLLNSPVLDSMRISVNSHMARYQSGKNTSDQVTIYMLEQSGRYGRAALESLKSDA GFMKDPKRARDLLMALDGEQHLQEQVSEKVLAENVLIAPGSVKPDATFWSALIQDRYNVM TCIEKDACVLVEQDLNSDGRAERILFAFDDERYIVYGFDPDKKEWQELTMSLLPRDITKE KLLTAAKDGKLGTKPKAWRDLVVDGERLDVNLNE >gi|299856450|gb|ADWV01000001.1| GENE 382 423092 - 423970 1078 292 aa, chain - ## HITS:1 COG:ZyrfI KEGG:ns NR:ns ## COG: ZyrfI COG1281 # Protein_GI_number: 15803904 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Escherichia coli O157:H7 EDL933 # 1 292 3 294 294 582 99.0 1e-166 MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLK FDGDITVQLQGDGPMSLAVINGNNNQQMRGVARVQGEIPENADLKTLVGNGYVVITITPS EGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGDVDGKPAAGGMLLQVMPAQNA QQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVKFKCTCSRERCADA LKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNASPADPQVH >gi|299856450|gb|ADWV01000001.1| GENE 383 423995 - 424396 443 133 aa, chain - ## HITS:1 COG:ECs4242 KEGG:ns NR:ns ## COG: ECs4242 COG1188 # Protein_GI_number: 15833496 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 214 100.0 3e-56 MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQG NDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALTMPHPDRRPDKKE RRDLLRFKHGDSE >gi|299856450|gb|ADWV01000001.1| GENE 384 424407 - 425075 875 222 aa, chain - ## HITS:1 COG:ECs4241 KEGG:ns NR:ns ## COG: ECs4241 COG1011 # Protein_GI_number: 15833495 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 222 16 237 237 459 100.0 1e-129 MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHD VQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHP HNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILD AAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM >gi|299856450|gb|ADWV01000001.1| GENE 385 425140 - 427275 1736 711 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_3676 NR:ns ## KEGG: EcSMS35_3676 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 711 1 711 711 1366 100.0 0 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESL TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP PFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRGYALQPVPSTQASIRGEESE QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQ DLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPL DMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPF LPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLR PVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYD YPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTL LLLTMLGSAIYNGVQAWRRYQRHRTRMMKIQAYYESCLNPQLITPSESLIE >gi|299856450|gb|ADWV01000001.1| GENE 386 427595 - 428155 666 186 aa, chain + ## HITS:1 COG:yrfE KEGG:ns NR:ns ## COG: yrfE COG0494 # Protein_GI_number: 16131274 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli K12 # 1 186 1 186 186 360 100.0 1e-99 MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRPTNREAVMIVPIVDDHL ILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPSYF SSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLEDPDFNEARNVSALFLVREWL KGQGRV >gi|299856450|gb|ADWV01000001.1| GENE 387 428320 - 430872 2650 850 aa, chain - ## HITS:1 COG:ECs4238 KEGG:ns NR:ns ## COG: ECs4238 COG5009 # Protein_GI_number: 15833492 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Escherichia coli O157:H7 # 1 850 9 858 858 1710 99.0 0 MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRLQIPMQIYSADGELIAQ YGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIFRAASVALFSGHASQGAST ITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEILELYLNKIYLGYRAYGVGAAA QVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRAVARRNVVLSRMLDEGYITQQQF DQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRYGESAYEDGYRIYTTITRKVQQAAQ QAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNNKITDTLKALPTYGPLLPAAVTSANPQ QATAMLADGSTVALSMEGVRWARPYRSDTQQGPTPRKVTDVLQTGQQIWVRQVGDAWWLA QVPEVNSALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGL TLASMLNDVPISRWDAGAGSDWQPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDY AAEYLQRFGFPAQNIVHTESLALGSASFTPMQVARGYAVMANGGFLVDPWFISKIENDQG GVIFEAKPKVACPECDIPVIYGDTQKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQA LVAKTGAQEYAPHVINTPLAFLIKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTT NSSKDAWFSGYGPGVVTSVWIGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAY MKAVLEGVPEQPLTPPPGIVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTI IDNGEAQELF >gi|299856450|gb|ADWV01000001.1| GENE 388 430992 - 431771 658 259 aa, chain + ## HITS:1 COG:no KEGG:B21_03199 NR:ns ## KEGG: B21_03199 # Name: yrfD # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 259 1 259 259 493 100.0 1e-138 MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLL PWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFD YSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAW RDNEQWLWATRYRWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPL PPSGGDFAIALGLALGKAY >gi|299856450|gb|ADWV01000001.1| GENE 389 431771 - 432310 320 179 aa, chain + ## HITS:1 COG:yrfC KEGG:ns NR:ns ## COG: yrfC COG3166 # Protein_GI_number: 16131271 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilN # Organism: Escherichia coli K12 # 1 179 1 179 179 253 100.0 1e-67 MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTGSAEARIDAVLLQAEQQ LARSLQITKPRLLEQQQLREQRSQRQRQRQFTRDWQSALEALAALLPEHAWLTTISWQQG TLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQGRWQFEYQLTRKVSDEHVL >gi|299856450|gb|ADWV01000001.1| GENE 390 432294 - 432734 149 146 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4111 NR:ns ## KEGG: ECO103_4111 # Name: hofO # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 146 1 146 146 266 100.0 2e-70 MNMFFDWWFATSPRLRQLCWAFWLLMLVTLIFLSSTHHEERDALIRLRASHHQQWAALYR LVDTTPFSEEKTLPFSPLDFQLSGAQLVSWHPSAQGGELALKTLWEAVPSAFTRLAERNV SVSRFSLSVEGDDLLFTLQLETPHEG >gi|299856450|gb|ADWV01000001.1| GENE 391 432724 - 433128 268 134 aa, chain + ## HITS:1 COG:no KEGG:B21_03196 NR:ns ## KEGG: B21_03196 # Name: yrfA # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 134 1 134 134 255 100.0 3e-67 MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGEHIIGVIKDGQKK WRRVQQNDVLENGWTILQLTPDALTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTR RTGGKAAKSDADGG >gi|299856450|gb|ADWV01000001.1| GENE 392 433040 - 434278 1115 412 aa, chain + ## HITS:1 COG:hofQ KEGG:ns NR:ns ## COG: hofQ COG4796 # Protein_GI_number: 16131268 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component HofQ # Organism: Escherichia coli K12 # 1 412 1 412 412 738 100.0 0 MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQEKLNLVVSPDVSGTVSL HLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIARQEAEQARAQANLPLENR SITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDNKTALSALEQWVAQMDLPVGQ VELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTTLGSDLSVATATTHVGFNIGRIN GRLLDLELSALEQKQQLDIIASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEA VLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVLAIDKQEIETQVEVKSGETLAL GGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVSSE >gi|299856450|gb|ADWV01000001.1| GENE 393 434679 - 435200 556 173 aa, chain + ## HITS:1 COG:ECs4232 KEGG:ns NR:ns ## COG: ECs4232 COG0703 # Protein_GI_number: 15833486 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Escherichia coli O157:H7 # 1 173 68 240 240 321 100.0 4e-88 MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFR DREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKR PLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN >gi|299856450|gb|ADWV01000001.1| GENE 394 435257 - 436345 907 362 aa, chain + ## HITS:1 COG:aroB KEGG:ns NR:ns ## COG: aroB COG0337 # Protein_GI_number: 16131267 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Escherichia coli K12 # 1 362 1 362 362 693 99.0 0 MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNETLAPLYLDKVRGVLEQA GVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQR GVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLDCLKTLPPRELAS GLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYCIRRCCELKAEVVAADERETGLR ALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAARTSERLGQFSSAETQRIITLLKRA GLPVNGPREMSAQAYLPHMLRDKKVLAGEIRLILPLAIGKSEVRSGVSHELVLNAIADCQ SA >gi|299856450|gb|ADWV01000001.1| GENE 395 436437 - 437723 1051 428 aa, chain + ## HITS:1 COG:ECs4230 KEGG:ns NR:ns ## COG: ECs4230 COG3266 # Protein_GI_number: 15833484 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 485 99.0 1e-137 MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKE RNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGI GSALKAPSTTSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAENTQQDVSLPPISSTP TQGQTPAATDGQQRVEVQGDLNNALTQPQNQQPLNNVAVNSTLPTEPATVAPVRNGNASR DTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPVAPVASTKAPAA TSAPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSSHYTLQLSSSSNYDN LNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPL RQVQADLK >gi|299856450|gb|ADWV01000001.1| GENE 396 437830 - 438666 647 278 aa, chain + ## HITS:1 COG:ECs4229 KEGG:ns NR:ns ## COG: ECs4229 COG0338 # Protein_GI_number: 15833483 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Escherichia coli O157:H7 # 1 278 1 278 278 564 100.0 1e-161 MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLNTDFSRYILADINSDLI SLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQDPFRRAVLFLYLNRYGYN GLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFFYCESYADSMARADDASVVYC DPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVERHIPVLISNHDTMLTREWYQRA KLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPAKK >gi|299856450|gb|ADWV01000001.1| GENE 397 438684 - 439361 778 225 aa, chain + ## HITS:1 COG:ECs4228 KEGG:ns NR:ns ## COG: ECs4228 COG0036 # Protein_GI_number: 15833482 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 441 100.0 1e-124 MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYG ITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPA TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGV KVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSELAKVSHE >gi|299856450|gb|ADWV01000001.1| GENE 398 439354 - 440112 948 252 aa, chain + ## HITS:1 COG:ECs4227 KEGG:ns NR:ns ## COG: ECs4227 COG0546 # Protein_GI_number: 15833481 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 489 98.0 1e-138 MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPIAGEERVITWIGNGADVLMER ALTWARQERATLRKTMGKPPVDDDIPAEEQVRILRKLFDRYYSEVAEEGTFLFPHVADTL GALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGGDDVQNKKPHPDPLLLVAERM GIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIDLSQPDVIYQSINDLLPALG LPHSENQESKND >gi|299856450|gb|ADWV01000001.1| GENE 399 440105 - 441109 1242 334 aa, chain + ## HITS:1 COG:trpS KEGG:ns NR:ns ## COG: trpS COG0180 # Protein_GI_number: 16131262 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 334 1 334 334 683 99.0 0 MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQHAITVRQDAQKLRKAT LDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFGELSRMTQFKDKSARYAEN INAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDIAQRFNALYGEIFKVPEPFIP KSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVKKIKRAVTDSDEPPVVRYDVQNK AGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGEVADAVSGMLTELQERYHRFRNDEA FLQQVMKDGAEKASVHASRTLKAVYEAIGFVAKP >gi|299856450|gb|ADWV01000001.1| GENE 400 441378 - 442283 755 301 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4101 NR:ns ## KEGG: ECO103_4101 # Name: yhfZ # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 301 1 301 301 606 100.0 1e-172 MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVGLTQAALKTLESSGAIR IERRGRNGSYLVEMDNKALLSHVDINNVVCAMPLPYTRLYEGLASGLKAQFDGIPFYYAH MRGADIRVECLLNGVYDMAVVSRLAAESYLTQKGFCLALELGPHTYVGEHQLICRKGESA NVKRVGLDNRSADQKIMTDVFFGDSDVERVDLSYHESLQRIVKGDVDAVIWNVVAENELT MLGLEATPLTDDPRFLQATEAVVLTRADDYPMQQLLRAVVDKHALLAHQQRVVSGEQEPS Y >gi|299856450|gb|ADWV01000001.1| GENE 401 442300 - 442662 378 120 aa, chain + ## HITS:1 COG:no KEGG:SSON_3513 NR:ns ## KEGG: SSON_3513 # Name: yhfY # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 120 15 134 134 220 100.0 1e-56 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV >gi|299856450|gb|ADWV01000001.1| GENE 402 442746 - 443909 1307 387 aa, chain + ## HITS:1 COG:yhfX KEGG:ns NR:ns ## COG: yhfX COG3457 # Protein_GI_number: 16131259 # Func_class: E Amino acid transport and metabolism # Function: Predicted amino acid racemase # Organism: Escherichia coli K12 # 1 387 1 387 387 764 96.0 0 MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQVLENGKRLIETARLYGIELYLMT KQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLSVAHQGHLVQIPCHQVADAVEQG TDVITVFTLDKAREVSAAAVKAGRVQFVLLKVYSDDDFLYPGQESGFVQHSLHEVVAEIK KLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLIQARDQLAKSGIALEQLNAPSATSCT SLPLLAEYGVTHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYR RGHAQHALVFTPENQKITETNLKTVDDSSIDYTLPLAGEYPVSSAVVLCFRTQIFVTRSD VVLVSGIHRGEPEIVGRYDSLGNSLGA >gi|299856450|gb|ADWV01000001.1| GENE 403 443909 - 445135 1204 408 aa, chain + ## HITS:1 COG:yhfW KEGG:ns NR:ns ## COG: yhfW COG1015 # Protein_GI_number: 16131258 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Escherichia coli K12 # 1 408 1 408 408 819 99.0 0 MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPALEKLGLINALGYA PGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIGRVEQALVSAGW QVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKIGRIVREQVQVG RVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDKKVQVPQKL YEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLNEFNTHPTAFICTNIQETDLA GHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVY QQGMIATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL >gi|299856450|gb|ADWV01000001.1| GENE 404 445132 - 446010 1023 292 aa, chain + ## HITS:1 COG:php KEGG:ns NR:ns ## COG: php COG1735 # Protein_GI_number: 16131257 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Escherichia coli K12 # 1 292 1 292 292 589 99.0 1e-168 MSFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMG RNAQFMLDVMRETGINVVACTGYYQDAFFPEHVVTRSVQELAQEMVDEIEQGIDGTELKA GIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLS RVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVML SMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQADVDVMLRETPSQFFQ >gi|299856450|gb|ADWV01000001.1| GENE 405 446021 - 446374 546 117 aa, chain + ## HITS:1 COG:no KEGG:SBO_3365 NR:ns ## KEGG: SBO_3365 # Name: yhfU # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 1 117 14 130 130 213 100.0 2e-54 MKKIGVAGLQREQIKKTIEATAPGSFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAAL SIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK >gi|299856450|gb|ADWV01000001.1| GENE 406 446386 - 447690 1426 434 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3782 NR:ns ## KEGG: EC55989_3782 # Name: yhfT # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.coli_55989 # Pathway: not_defined # 1 434 1 434 434 729 100.0 0 MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYMNRREAGSIAFGLSIGF VASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGAIWGVLILTCLLPVNQLLT ALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLIAAVVVLMTRVVVVRYFPHLN PESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVFEERTSRIIKNLPYIAIVGALIA AVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLINQAALAEFMRGLGFVPLIATTALAT GVYAVAGFTFVYAVGYLSPNPMVAAVLGAVVISAEVLLLRSIGKWLGRYPSVRNASDNIR NAMNMLMEVALLVGSIFAAIKMAGYTGFSIAVAIYFLNESLGRPVQKMAAPVVAVMITGI LLNVLYWLGLFVPA >gi|299856450|gb|ADWV01000001.1| GENE 407 447702 - 448787 1001 361 aa, chain + ## HITS:1 COG:no KEGG:JW3339 NR:ns ## KEGG: JW3339 # Name: yhfS # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 361 1 361 361 662 100.0 0 MKTFPLQSLTIIEAQQKQFALVDSICRHFPGSEFLTGGDLGLTPGLNQPRVTQRVEQVLA DAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYPTTRVIIEQMGLTLITVDF NDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATLRAAGVPALTDDNYAVMKVAR IGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRATLYSGGSQIQGAQALEVLRGLV FAPVMHAVQAGVSERLLALLNGGAVPEVKSAVIANAQSKVLIVEFHQPIAARVLEEAQKR GALPYPVGAESKYEIPPLFYRLSGTFRQANPQSEHCAIRINPNRSGEETVLRILRESIAS I >gi|299856450|gb|ADWV01000001.1| GENE 408 448894 - 449061 268 55 aa, chain - ## HITS:1 COG:no KEGG:LF82_3285 NR:ns ## KEGG: LF82_3285 # Name: yhfL # Def: uncharacterized protein YhfL # Organism: E.coli_LF82 # Pathway: not_defined # 1 55 1 55 55 107 100.0 1e-22 MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISISKIIGGCGPTAQ >gi|299856450|gb|ADWV01000001.1| GENE 409 449308 - 450681 1354 457 aa, chain - ## HITS:1 COG:cysG_2 KEGG:ns NR:ns ## COG: cysG_2 COG0007 # Protein_GI_number: 16131246 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Escherichia coli K12 # 211 457 1 247 247 503 100.0 1e-142 MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTL VEGPFDESLLDTCWLAIAATDDDALNQRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRS PLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQLRGRVKQQFATMSERRRFWE KLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEVVLVGAGPGDAGLLTLKGLQQIQ QADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHCVPQEEINQILLREAQKGKRVVRLK GGDPFIFGRGGEELETLCNAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLITGHL KTGGELDWENLAAEKQTLVFYMGLNQAATIQQKLIEHGMPGEMPVAIVENGTAVTQRVID GTLTQLGELAQQMNSPSLIIIGRVVGLRDKLNWFSNH >gi|299856450|gb|ADWV01000001.1| GENE 410 450700 - 451506 984 268 aa, chain - ## HITS:1 COG:nirCm KEGG:ns NR:ns ## COG: nirCm COG2116 # Protein_GI_number: 16132233 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Escherichia coli K12 # 1 268 1 268 268 468 100.0 1e-132 MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLV MGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVA MLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKF IAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVF MGLGYWYATPKANRPVADKFNQTETAAG >gi|299856450|gb|ADWV01000001.1| GENE 411 451633 - 451959 494 108 aa, chain - ## HITS:1 COG:ECs4217 KEGG:ns NR:ns ## COG: ECs4217 COG2146 # Protein_GI_number: 15833471 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Escherichia coli O157:H7 # 1 108 1 108 108 223 100.0 8e-59 MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIA EHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG >gi|299856450|gb|ADWV01000001.1| GENE 412 451956 - 454499 2990 847 aa, chain - ## HITS:1 COG:nirB KEGG:ns NR:ns ## COG: nirB COG1251 # Protein_GI_number: 16131244 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Escherichia coli K12 # 1 847 1 847 847 1739 99.0 0 MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVHLSSYFSHHTAEE LSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKG SDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPML MAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVEARKTMRFADGSELEVDFIVFS TGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDIYAIGECASWNNRVFGLVAPGYKMA QVAVDHILGSENAFEGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDESKEIYKRLI VSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHSGSGKPSIGVDKLPD SAQICSCFDVTKGDLIAAINKGCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIE VNNNLCEHFAYSRQELFHLIRVEGIKTFEELLAKHGKGYGCEVCKPTVGSLLASCWNEYI LKPEHTPLQDSNDNFLANIQKDGTYSVIPRSPGGEITPEGLMAVGRIAREFNLYTKITGS QRLAMFGAQKDDLPEIWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVE LENRYKGIRTPHKMKFGVSGCTRECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLL AADIDRETLIKYLDRFMMFYIRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLE EEMARLREAVVCEWTETVNTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPV TLVEDNA >gi|299856450|gb|ADWV01000001.1| GENE 413 454761 - 455942 1309 393 aa, chain - ## HITS:1 COG:yhfC KEGG:ns NR:ns ## COG: yhfC COG0477 # Protein_GI_number: 16131243 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 393 1 393 393 684 100.0 0 MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSSMSNTFTFLNAGILISI FLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSAAMFILGVVSGITMSIGTFL VTQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSIEWYWVYACIGLVYVAIFILT FGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCYILGQLGFISWVPEYAKGLGMSL NDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTVLAGLAAILMYVFNTGTPAHMAWSI LALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVLTCGTIGTMLTFVVTGPIVEHSGPQAA LLTANGLYAVVFVMCFLLGFVSRHRQHNTLTSH >gi|299856450|gb|ADWV01000001.1| GENE 414 456213 - 456785 540 190 aa, chain + ## HITS:1 COG:ECs4214 KEGG:ns NR:ns ## COG: ECs4214 COG0652 # Protein_GI_number: 15833468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 359 100.0 2e-99 MFKSTLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYV NSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADK DSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKP VVILSAKVLP >gi|299856450|gb|ADWV01000001.1| GENE 415 456890 - 457057 129 55 aa, chain + ## HITS:1 COG:no KEGG:Z4723 NR:ns ## KEGG: Z4723 # Name: yhfG # Def: hypothetical protein # Organism: E.coli_O157 # Pathway: not_defined # 1 55 1 55 55 69 98.0 3e-11 MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALARLEELRRHYER >gi|299856450|gb|ADWV01000001.1| GENE 416 457047 - 457649 715 200 aa, chain + ## HITS:1 COG:fic KEGG:ns NR:ns ## COG: fic COG2184 # Protein_GI_number: 16131240 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Escherichia coli K12 # 1 200 1 200 200 396 99.0 1e-110 MSDKFGEGRDPYLYPGLDIMRNRLNIHQQQRLEQAAYEMTALRAATIELGPLVRGLPHLR TIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNALMQDLEEEGYLVGLEKAKF VERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQLSWQGIEKEAWNQANQSGAMG DLTALQMIFSKVVSEAGESE >gi|299856450|gb|ADWV01000001.1| GENE 417 457681 - 458244 479 187 aa, chain + ## HITS:1 COG:pabA KEGG:ns NR:ns ## COG: pabA COG0512 # Protein_GI_number: 16131239 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Escherichia coli K12 # 1 187 1 187 187 400 100.0 1e-112 MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAG ISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHGKTSPITHNGEGVFRGLAN PLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQWDLEGVQFHPESILSEQGHQL LANFLHR >gi|299856450|gb|ADWV01000001.1| GENE 418 458330 - 459550 1336 406 aa, chain + ## HITS:1 COG:argD KEGG:ns NR:ns ## COG: argD COG4992 # Protein_GI_number: 16131238 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli K12 # 1 406 1 406 406 816 99.0 0 MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEYVDFAGGIAVTALGHCH PALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERVVFMNSGTEANETAFKLAR HYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVK AVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQHQALLVFDEVQCGMGRTGDLFA YMHYGVTPDILTSAKALGGGFPISAMLTTAEIASAFHPGSHGSTYGGNPLSCAVAGAAFD IINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSDIRGMGLLIGAELKPQFKGRARDFLYA GAGAGVMVLNAGPDVMRFAPSLVVEDADIDEGMQRFAHAVAKVVGA >gi|299856450|gb|ADWV01000001.1| GENE 419 459617 - 461707 1688 696 aa, chain - ## HITS:1 COG:ECs4209 KEGG:ns NR:ns ## COG: ECs4209 COG1289 # Protein_GI_number: 15833463 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 696 1 696 696 1332 100.0 0 MWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVPACCNIAGLDTPHKRFF KRLIIGASLFATCSLLTQLLLAKDVPLPFLLTGLTLVLGVTAELGPLHAKLLPASLLAAI FTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQPLRESLSLLYRELADYCEAKY SLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLSAQNNTDYKRMLRIFQEALDLQE HISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARLRVLADDILYHRLPTRFTMEKQIGA LEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPLYARDLLADKQRRMPLLPALKSYLSLK SPALRNAGRLSVMLSVASLMGTALHLPKSYWILMTVLLVTQNGYGATRLRIVNRSVGTVV GLIIAGVALHFKIPEGYTLTLMLITTLASYLILRKNYGWATVGFTITAVYTLQLLWLNGE QYILPRLIDTIIGCLIAFGGTVWLWPQWQSGLLRKNAHDALEAYQEAIRLILSEDPQPTP LAWQRMRVNQAHNTLYNSLNQAMQEPAFNSHYLADMKLWVTHSQFIVEHINAMTTLAREH RALPPELAQEYLQSCEIAIQRCQQRLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQ RVIGHLNTMHTISSMAWRQRPHHGIWLSRKLRDSKA >gi|299856450|gb|ADWV01000001.1| GENE 420 461758 - 462390 857 210 aa, chain - ## HITS:1 COG:ECs4208 KEGG:ns NR:ns ## COG: ECs4208 COG0664 # Protein_GI_number: 15833462 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 1 210 1 210 210 418 100.0 1e-117 MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM ILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQ MARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS RETVGRILKMLEDQNLISAHGKTIVVYGTR >gi|299856450|gb|ADWV01000001.1| GENE 421 462692 - 463096 447 134 aa, chain + ## HITS:1 COG:ECs4207 KEGG:ns NR:ns ## COG: ECs4207 COG1765 # Protein_GI_number: 15833461 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 134 1 134 134 257 100.0 3e-69 MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGR QDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLE KAVNITHSYEVVAA >gi|299856450|gb|ADWV01000001.1| GENE 422 463151 - 464020 947 289 aa, chain - ## HITS:1 COG:prkB KEGG:ns NR:ns ## COG: prkB COG3954 # Protein_GI_number: 16131234 # Func_class: C Energy production and conversion # Function: Phosphoribulokinase # Organism: Escherichia coli K12 # 1 289 1 289 289 595 100.0 1e-170 MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKAR DAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYDEAVPWNQVPGTFTPWQPL PEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLEWIQKLIRDTSERGHSREAVM DSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFAAKGIPSLDESFVVIHFRNLEGI DFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIMLPLVQRLMEGKKIE >gi|299856450|gb|ADWV01000001.1| GENE 423 464074 - 464292 348 72 aa, chain - ## HITS:1 COG:ECs4205 KEGG:ns NR:ns ## COG: ECs4205 COG3089 # Protein_GI_number: 15833459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 72 1 72 72 130 100.0 4e-31 MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKRQLQCGEAVLVWSELHE TVNIMPRSQFRE >gi|299856450|gb|ADWV01000001.1| GENE 424 464286 - 465248 888 320 aa, chain - ## HITS:1 COG:ECs4204 KEGG:ns NR:ns ## COG: ECs4204 COG0429 # Protein_GI_number: 15833458 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Escherichia coli O157:H7 # 1 320 21 340 340 675 99.0 0 MRGFSNCHLQTMLPRLFRRKVKFTPYWQRLELPDGDFVDLAWSEAPAQARHKPRLVVFHG LEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQR EFGHAPTAAVGYSLGGNMLACLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQ RYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCS AMPMLNRIAKPTLIIHAKDDPFMDHQVIPKPESLPPQVEYQLTEHGGHVGFIGGTLLHPQ MWLESRIPDWLTTYLEAKSC >gi|299856450|gb|ADWV01000001.1| GENE 425 465308 - 467221 2491 637 aa, chain - ## HITS:1 COG:ECs4203 KEGG:ns NR:ns ## COG: ECs4203 COG0488 # Protein_GI_number: 15833457 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 637 1 637 637 1207 99.0 0 MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTF PGSWQLAWVNQETPALPQAALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAI DAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHL DLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRAT RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFRF SFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAG ELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQ GDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGAL VVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQADEAPKENANSA QARKDQKRREAELRAQTQPLRKEIARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELT ACLQQQASAKSGLEECEMAWLEAQEQLEQMLLEGQSN >gi|299856450|gb|ADWV01000001.1| GENE 426 467352 - 467903 455 183 aa, chain + ## HITS:1 COG:ECs4202 KEGG:ns NR:ns ## COG: ECs4202 COG2249 # Protein_GI_number: 15833456 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli O157:H7 # 1 183 2 184 184 365 100.0 1e-101 MSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHYPDFFIDIPREQALLRE HEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAGKYWRSVITTGEPESAYRY DALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSAQELASHARAYGDWLANPLSP GGR >gi|299856450|gb|ADWV01000001.1| GENE 427 467903 - 469708 1057 601 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 7 590 9 612 618 411 36 1e-113 MEGSDFLLAGVLFLFAAVAAVPLASRLGIGAVLGYLLAGIAIGPWGLGFISDVDEILHFS ELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLSAALLAGLLMLTDFAWQAAVVGG IGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAVIPALALVPLLAGSADEHFDW MKIGMKVLAFVGMLIGGRYLLRPVFRFIAASGVREVFTAATLLLVLGSALFMDALGLSMA LGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFISVGMSLNLGVLYTHLLWVVISVVV LVAVKILVLYLLARLYGVRSSERMQFAGVLSQGGEFAFVLFSTASSQRLFQGDQMALLLV TVTLSMMTTPLLMKLVDKWLSRQFNGPEEEDEKPWVNDDKPQVIVVGFGRFGQVIGRLLM ANKMRITVLERDISAVNLMRKYGYKVYYGDATQVDLLRSAGAEAAESIVITCNEPEDTMK LVEICQQHFPHLHILARARGRVEAHELLQAGVTQFSRETFSSALELGRKTLVTLGMHPHQ AQRAQLHFRRLDMRMLRELIPMHADTVQISRAREARRELEEIFQREMQQERRQLDGWDEF E >gi|299856450|gb|ADWV01000001.1| GENE 428 469718 - 469918 212 66 aa, chain + ## HITS:1 COG:Z4708 KEGG:ns NR:ns ## COG: Z4708 COG3529 # Protein_GI_number: 15803863 # Func_class: R General function prediction only # Function: Predicted nucleic-acid-binding protein containing a Zn-ribbon domain # Organism: Escherichia coli O157:H7 EDL933 # 1 66 1 66 66 120 100.0 6e-28 MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMREADKEARDHVRKDEQVI GIFHPD >gi|299856450|gb|ADWV01000001.1| GENE 429 470013 - 470603 768 196 aa, chain + ## HITS:1 COG:ECs4200 KEGG:ns NR:ns ## COG: ECs4200 COG1047 # Protein_GI_number: 15833454 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 2 # Organism: Escherichia coli O157:H7 # 1 148 1 148 196 271 100.0 7e-73 MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDV AVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVD GNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHHDHDHDGCCGGHGHDHGHEHG GEGCCGGKGNGGCGCH >gi|299856450|gb|ADWV01000001.1| GENE 430 470652 - 470870 316 72 aa, chain - ## HITS:1 COG:ECs4199 KEGG:ns NR:ns ## COG: ECs4199 COG2900 # Protein_GI_number: 15833453 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 72 1 72 72 99 98.0 1e-21 MQDLSLETRLAELESRLAFQEITIEELNVTVTAHEMEMAKLRDHLRLLTEKLKASQPSNI ASQAEETPPPHY >gi|299856450|gb|ADWV01000001.1| GENE 431 471091 - 471903 986 270 aa, chain + ## HITS:1 COG:ECs4198 KEGG:ns NR:ns ## COG: ECs4198 COG0545 # Protein_GI_number: 15833452 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Escherichia coli O157:H7 # 1 259 1 259 270 418 100.0 1e-117 MKSLFKVTLLATTMAVALHAPITFAAEAAKPATTADSKAAFKNDDQKSAYALGASLGRYM ENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEARVKSSAQAKMEKD AADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKE FDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPNSTLV FDVELLDVKPAPKADAKPEADAKAADSAKK >gi|299856450|gb|ADWV01000001.1| GENE 432 472070 - 472792 789 240 aa, chain + ## HITS:1 COG:yheO KEGG:ns NR:ns ## COG: yheO COG2964 # Protein_GI_number: 16131225 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 240 5 244 244 469 100.0 1e-132 MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCS AIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNR EQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFASSVEDLVTQTLEFTIEEVNA DRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK >gi|299856450|gb|ADWV01000001.1| GENE 433 472792 - 473178 454 128 aa, chain + ## HITS:1 COG:ECs4196 KEGG:ns NR:ns ## COG: ECs4196 COG1553 # Protein_GI_number: 15833450 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Escherichia coli O157:H7 # 1 128 1 128 128 225 95.0 2e-59 MRFAIVVTGPAYGTQQASSAFQFAQALIVEGHELSSVFFYREGVYNANQLTSPASDEFDL VRGWQQLNAQHGVALNICVAAALRRGIVDETEAGRLGLASSNLQPGFTLSGLGALAEASL TCDRVVQF >gi|299856450|gb|ADWV01000001.1| GENE 434 473178 - 473537 250 119 aa, chain + ## HITS:1 COG:yheM KEGG:ns NR:ns ## COG: yheM COG2923 # Protein_GI_number: 16131223 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in the oxidation of intracellular sulfur # Organism: Escherichia coli K12 # 1 119 1 119 119 223 98.0 8e-59 MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLTVFFIADGVFQLLSGQKPDAVLARD YIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLEADALRRELANYDVILRF >gi|299856450|gb|ADWV01000001.1| GENE 435 473545 - 473832 292 95 aa, chain + ## HITS:1 COG:ECs4194 KEGG:ns NR:ns ## COG: ECs4194 COG2168 # Protein_GI_number: 15833448 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in oxidation of intracellular sulfur # Organism: Escherichia coli O157:H7 # 1 95 1 95 95 182 98.0 2e-46 MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYLESLRNAPIKVYALNED LIARGLTGQISNDIIPIDYTDFVRLTVKHSSQMAW >gi|299856450|gb|ADWV01000001.1| GENE 436 473898 - 474332 744 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|226956878|ref|YP_002807671.1| 30S ribosomal subunit protein S12 [Escherichia sp. 1_1_43] # 1 144 1 144 144 291 99 4e-77 MCEDVLLRVYEAKAKTRSYLMATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTT TPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRG ALDCSGVKDRKQARSKYGVKRPKA >gi|299856450|gb|ADWV01000001.1| GENE 437 474429 - 474899 777 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803854|ref|NP_289888.1| 30S ribosomal protein S7 [Escherichia coli O157:H7 EDL933] # 1 156 1 156 156 303 100 6e-81 MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELE AFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRL ANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW >gi|299856450|gb|ADWV01000001.1| GENE 438 474996 - 477110 2275 704 aa, chain + ## HITS:1 COG:ECs4191 KEGG:ns NR:ns ## COG: ECs4191 COG0480 # Protein_GI_number: 15833445 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Escherichia coli O157:H7 # 1 704 1 704 704 1402 100.0 0 MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERG ITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ PQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFT GVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGG EELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILD DGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERF GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAV EPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE ANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDI KGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIA FKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPL SEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK >gi|299856450|gb|ADWV01000001.1| GENE 439 477181 - 478365 1634 394 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 393 1 406 407 634 76 1e-180 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARG ITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHI LLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKALE GDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVG EEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIK PHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMV VTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLG >gi|299856450|gb|ADWV01000001.1| GENE 440 478548 - 478742 172 64 aa, chain + ## HITS:1 COG:ZyheA KEGG:ns NR:ns ## COG: ZyheA COG2906 # Protein_GI_number: 15803851 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin-associated ferredoxin # Organism: Escherichia coli O157:H7 EDL933 # 1 64 1 64 64 114 100.0 4e-26 MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIRAAREVMQDELMQMPEF KEIA >gi|299856450|gb|ADWV01000001.1| GENE 441 478815 - 479291 568 158 aa, chain + ## HITS:1 COG:ECs4189 KEGG:ns NR:ns ## COG: ECs4189 COG2193 # Protein_GI_number: 15833443 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 275 99.0 2e-74 MKGDVKIINYLNKLLGNELVAINQYFLHARMFKNWGLMRLNDVEYHESIDEMKHADKYIE RILFLEGIPNLQDLGKLGIGEDVEEMLQSDLRLELEGAKDLREAIAYADSVHDYVSRDMM IEILADEEGHIDWLETELDLIGKIGLQNYLQSQIKVKD >gi|299856450|gb|ADWV01000001.1| GENE 442 479288 - 479755 342 155 aa, chain - ## HITS:1 COG:ECs4188 KEGG:ns NR:ns ## COG: ECs4188 COG1989 # Protein_GI_number: 15833442 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 266 93.0 8e-72 MDATLPFLILYACLSVLLFLWDAKHGLLPDRFTCPLLWSGLLFSQVCNPDGLADALWGAI IGYGTFAVIYWGYRILRHKEGLGYGDVKFLAALGAWHTWTFLPRLVFLAASFACGAVVVG LLMRGKESLKNPLPFGPFLAAAGFVVGWDSLLAGR >gi|299856450|gb|ADWV01000001.1| GENE 443 479940 - 480071 58 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGECNRSYVAPRLGALLGSQIRLTEVQIEPAVNYDKPAHYTQI >gi|299856450|gb|ADWV01000001.1| GENE 444 480134 - 480445 513 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803848|ref|NP_289882.1| 30S ribosomal protein S10 [Escherichia coli O157:H7 EDL933] # 1 103 1 103 103 202 100 2e-50 MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKD ARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG >gi|299856450|gb|ADWV01000001.1| GENE 445 480478 - 481107 1056 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803847|ref|NP_289881.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 EDL933] # 1 209 1 209 209 411 100 1e-113 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV TKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFADVKKVDVTGTSKGKGFAG TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRV DAERNLLLVKGAVPGATGSDLIVKPAVKA >gi|299856450|gb|ADWV01000001.1| GENE 446 481118 - 481723 992 201 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803846|ref|NP_289880.1| 50S ribosomal protein L4 [Escherichia coli O157:H7 EDL933] # 1 201 1 201 201 386 100 1e-106 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV VEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL IAFDKVVMTADAVKQVEEMLA >gi|299856450|gb|ADWV01000001.1| GENE 447 481720 - 482022 490 100 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803845|ref|NP_289879.1| 50S ribosomal protein L23 [Escherichia coli O157:H7 EDL933] # 1 100 1 100 100 193 100 1e-47 MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNT LVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE >gi|299856450|gb|ADWV01000001.1| GENE 448 482040 - 482861 1438 273 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803844|ref|NP_289878.1| 50S ribosomal protein L2 [Escherichia coli O157:H7 EDL933] # 1 273 1 273 273 558 100 1e-157 MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQ AYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGV DAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGE MRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF GKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK >gi|299856450|gb|ADWV01000001.1| GENE 449 482878 - 483156 484 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803843|ref|NP_289877.1| 30S ribosomal protein S19 [Escherichia coli O157:H7 EDL933] # 1 92 1 92 92 191 100 5e-47 MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPV FVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK >gi|299856450|gb|ADWV01000001.1| GENE 450 483171 - 483503 537 110 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803842|ref|NP_289876.1| 50S ribosomal protein L22 [Escherichia coli O157:H7 EDL933] # 1 110 1 110 110 211 100 4e-53 METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEH NDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR >gi|299856450|gb|ADWV01000001.1| GENE 451 483521 - 484222 1183 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15833433|ref|NP_312206.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. Sakai] # 1 233 1 233 233 460 100 1e-128 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK >gi|299856450|gb|ADWV01000001.1| GENE 452 484235 - 484645 694 136 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803840|ref|NP_289874.1| 50S ribosomal protein L16 [Escherichia coli O157:H7 EDL933] # 1 136 1 136 136 271 100 2e-71 MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQ GKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLA AAKLPIKTTFVTKTVM >gi|299856450|gb|ADWV01000001.1| GENE 453 484645 - 484836 301 63 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803839|ref|NP_289873.1| 50S ribosomal protein L29 [Escherichia coli O157:H7 EDL933] # 1 63 1 63 63 120 100 9e-26 MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEK AGA >gi|299856450|gb|ADWV01000001.1| GENE 454 484836 - 485090 431 84 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803838|ref|NP_289872.1| 30S ribosomal protein S17 [Escherichia coli O157:H7 EDL933] # 1 84 1 84 84 170 100 8e-41 MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVE IRECRPLSKTKSWTLVRVVEKAVL >gi|299856450|gb|ADWV01000001.1| GENE 455 485255 - 485626 617 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803837|ref|NP_289871.1| 50S ribosomal protein L14 [Escherichia coli O157:H7 EDL933] # 1 123 1 123 123 242 100 2e-62 MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKA VVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAP EVL >gi|299856450|gb|ADWV01000001.1| GENE 456 485637 - 485951 516 104 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803836|ref|NP_289870.1| 50S ribosomal protein L24 [Escherichia coli O157:H7 EDL933] # 1 104 1 104 104 203 100 1e-50 MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPALNQPGGIVE KEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSETIK >gi|299856450|gb|ADWV01000001.1| GENE 457 485966 - 486505 911 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803835|ref|NP_289869.1| 50S ribosomal protein L5 [Escherichia coli O157:H7 EDL933] # 1 179 1 179 179 355 100 2e-96 MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAI SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK >gi|299856450|gb|ADWV01000001.1| GENE 458 486520 - 486825 513 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803834|ref|NP_289868.1| 30S ribosomal protein S14 [Escherichia coli O157:H7 EDL933] # 1 101 1 101 101 202 100 2e-50 MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQ RNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW >gi|299856450|gb|ADWV01000001.1| GENE 459 486859 - 487251 641 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803833|ref|NP_289867.1| 30S ribosomal protein S8 [Escherichia coli O157:H7 EDL933] # 1 130 1 130 130 251 100 3e-65 MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELE LTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAG LGGEIICYVA >gi|299856450|gb|ADWV01000001.1| GENE 460 487264 - 487797 902 177 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803832|ref|NP_289866.1| 50S ribosomal protein L6 [Escherichia coli O157:H7 EDL933] # 1 177 1 177 177 352 100 2e-95 MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYAD GWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAG ITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVRTKEAKKK >gi|299856450|gb|ADWV01000001.1| GENE 461 487807 - 488160 572 117 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803831|ref|NP_289865.1| 50S ribosomal protein L18 [Escherichia coli O157:H7 EDL933] # 1 117 1 117 117 224 100 3e-57 MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAE QLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGLQF >gi|299856450|gb|ADWV01000001.1| GENE 462 488175 - 488678 834 167 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803830|ref|NP_289864.1| 30S ribosomal protein S5 [Escherichia coli O157:H7 EDL933] # 1 167 1 167 167 325 100 1e-87 MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAI QKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGV HNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILGK >gi|299856450|gb|ADWV01000001.1| GENE 463 488682 - 488861 291 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803829|ref|NP_289863.1| 50S ribosomal protein L30 [Escherichia coli O157:H7 EDL933] # 1 59 1 59 59 116 100 1e-24 MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSFMVKVEE >gi|299856450|gb|ADWV01000001.1| GENE 464 488865 - 489299 715 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803828|ref|NP_289862.1| 50S ribosomal protein L15 [Escherichia coli O157:H7 EDL933] # 1 144 1 144 144 280 100 9e-74 MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRR LPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPV TVRGLRVTKGARAAIEAAGGKIEE >gi|299856450|gb|ADWV01000001.1| GENE 465 489307 - 490638 1258 443 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 12 440 16 444 447 489 56 1e-136 MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTI IEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYT RYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITE RGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERG QRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGW NWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGE QTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQV QTLMMSSQYESALKKANLKGYGR >gi|299856450|gb|ADWV01000001.1| GENE 466 490670 - 490786 198 38 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803826|ref|NP_289860.1| 50S ribosomal protein L36 [Escherichia coli O157:H7 EDL933] # 1 38 1 38 38 80 100 8e-14 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG >gi|299856450|gb|ADWV01000001.1| GENE 467 490933 - 491289 586 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803825|ref|NP_289859.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 EDL933] # 1 118 1 118 118 230 99 8e-59 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK >gi|299856450|gb|ADWV01000001.1| GENE 468 491306 - 491695 669 129 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803824|ref|NP_289858.1| 30S ribosomal protein S11 [Escherichia coli O157:H7 EDL933] # 1 129 1 129 129 262 100 2e-68 MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG CRPPKKRRV >gi|299856450|gb|ADWV01000001.1| GENE 469 491729 - 492349 1038 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803823|ref|NP_289857.1| 30S ribosomal protein S4 [Escherichia coli O157:H7 EDL933] # 1 206 1 206 206 404 100 1e-111 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQK VRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSH KAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEG TFKRKPERSDLSADINEHLIVELYSK >gi|299856450|gb|ADWV01000001.1| GENE 470 492375 - 493364 1007 329 aa, chain + ## HITS:1 COG:ECs4160 KEGG:ns NR:ns ## COG: ECs4160 COG0202 # Protein_GI_number: 15833414 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 613 100.0 1e-175 MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPV ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL TEIKDVLASRGLSLGMRLENWPPASIADE >gi|299856450|gb|ADWV01000001.1| GENE 471 493405 - 493788 636 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803821|ref|NP_289855.1| 50S ribosomal protein L17 [Escherichia coli O157:H7 EDL933] # 1 127 1 127 127 249 100 1e-64 MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSV ANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSE KAEAAAE >gi|299856450|gb|ADWV01000001.1| GENE 472 493894 - 494262 299 122 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_4615 NR:ns ## KEGG: ECH74115_4615 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 122 1 122 122 226 100.0 2e-58 MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL EQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLNKIN DN >gi|299856450|gb|ADWV01000001.1| GENE 473 494273 - 494698 425 141 aa, chain + ## HITS:1 COG:ECs4157 KEGG:ns NR:ns ## COG: ECs4157 COG0789 # Protein_GI_number: 15833411 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 141 1 141 141 247 100.0 4e-66 MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESDLQRLKFIRHARQLGFS LESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDACCGTAHS SVYCSILEALEQGASGVKSGC >gi|299856450|gb|ADWV01000001.1| GENE 474 494969 - 495379 442 136 aa, chain - ## HITS:1 COG:ECs4156 KEGG:ns NR:ns ## COG: ECs4156 COG1970 # Protein_GI_number: 15833410 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 243 100.0 5e-65 MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPPLGLLIGGIDFKQFAVT LRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKLNRKKEEPAAAPAPTKEEV LLTEIRDLLKEQNNRS >gi|299856450|gb|ADWV01000001.1| GENE 475 495509 - 496885 1206 458 aa, chain - ## HITS:1 COG:ECs4155 KEGG:ns NR:ns ## COG: ECs4155 COG0569 # Protein_GI_number: 15833409 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Escherichia coli O157:H7 # 1 458 1 458 458 871 100.0 0 MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFDLRVVQGHGSHPRVLRE AGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSPDYVRDADKLFHSDAVPID HLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKAYYGGPLIGNALSTMREHMPH IDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHIRAVMSELQRLEKPYKRIMLVGG GNIGAGLARRLEKDYSVKLIERNQQRAAELAEKLQNTIVFFGDASDQELLAEEHIDQVDL FIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRAYVDLVQGSVIDIAISPQQATISALLS HVRKADIVGVSSLRRGVAEAIEAVAHGDESTSRVVGRVIDEIKLPPGTIIGAVVRGNDVM IANDNLRIEQGDHVIMFLTDKKFITDVERLFQPSPFFL >gi|299856450|gb|ADWV01000001.1| GENE 476 496907 - 498169 1174 420 aa, chain - ## HITS:1 COG:sun KEGG:ns NR:ns ## COG: sun COG0144 # Protein_GI_number: 16131168 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Escherichia coli K12 # 1 420 10 429 429 840 99.0 0 MAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARP MTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQ EELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRVNRTHHSRDSWL ALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEH ILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQ WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGT LVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK >gi|299856450|gb|ADWV01000001.1| GENE 477 498242 - 499189 906 315 aa, chain - ## HITS:1 COG:ECs4153 KEGG:ns NR:ns ## COG: ECs4153 COG0223 # Protein_GI_number: 15833407 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Escherichia coli O157:H7 # 1 315 1 315 315 612 99.0 1e-175 MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKG LPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRG AAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGL ITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLE IEGQPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQDL LNSRREWFVPGNRLV >gi|299856450|gb|ADWV01000001.1| GENE 478 499204 - 499713 533 169 aa, chain - ## HITS:1 COG:ECs4152 KEGG:ns NR:ns ## COG: ECs4152 COG0242 # Protein_GI_number: 15833406 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Escherichia coli O157:H7 # 1 169 1 169 169 291 100.0 3e-79 MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIV IDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFE LEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA >gi|299856450|gb|ADWV01000001.1| GENE 479 499843 - 500967 289 374 aa, chain + ## HITS:1 COG:smf KEGG:ns NR:ns ## COG: smf COG0758 # Protein_GI_number: 16132235 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Escherichia coli K12 # 1 374 1 374 374 737 98.0 0 MVDTEIWLRLMSISSLYGDDMVRIAHWLAKQSQIDAVGLQQTGLTLRQAQRFLSFPRKSI ESSLCWLEQPNHHLIPADSEFYPPQLQATTDYPGALFVEGELHALHSFQLAIVGSRAHSW YGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVNGVSIAVLGNGLNTIHPRRHA RLAASLLEHGGALVSEFPLDVPPLAYNFPRRNRIISGLSKGVLVVEAALRSGSLVTARCA LEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEPEEILENLQFGLHWLPDAPENSFYS PDQQDVALPFPELLANVGDEVTPVDVVAERAGQPVPEVVTQLLELELAGWIAAVPGGYVR LRRACHVRRTNVFV >gi|299856450|gb|ADWV01000001.1| GENE 480 500939 - 501412 579 157 aa, chain + ## HITS:1 COG:smg KEGG:ns NR:ns ## COG: smg COG2922 # Protein_GI_number: 16131165 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 157 1 157 157 271 99.0 5e-73 MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNALLWLEKLADYQEGLAEP MQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLETREMVIERVLALDNAEFEL DDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH >gi|299856450|gb|ADWV01000001.1| GENE 481 501441 - 501983 184 180 aa, chain + ## HITS:1 COG:ZyrdD KEGG:ns NR:ns ## COG: ZyrdD COG0551 # Protein_GI_number: 15803811 # Func_class: L Replication, recombination and repair # Function: Zn-finger domain associated with topoisomerase type I # Organism: Escherichia coli O157:H7 EDL933 # 9 180 1 172 172 323 98.0 7e-89 MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLE GQVCPACGENLVLRQGRFGMFIGCSNYPECEHTELIDKPDETAITCPQCRTGHLVQRRSR YGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKTAQGVKHFCASKQCGKPVSAE >gi|299856450|gb|ADWV01000001.1| GENE 482 501988 - 502506 348 172 aa, chain + ## HITS:1 COG:ECs4148 KEGG:ns NR:ns ## COG: ECs4148 COG0009 # Protein_GI_number: 15833402 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Escherichia coli O157:H7 # 1 171 1 171 190 335 99.0 3e-92 MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLIL IAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTD HPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVVPGETGGV >gi|299856450|gb|ADWV01000001.1| GENE 483 502564 - 503382 393 272 aa, chain + ## HITS:1 COG:aroE KEGG:ns NR:ns ## COG: aroE COG0169 # Protein_GI_number: 16131162 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Escherichia coli K12 # 1 272 1 272 272 545 98.0 1e-155 METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFRAGGKGANV TVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLLGDNTDGIGLLSDLERLSFIRPGL RILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALGMDELEGHE FDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLGM LVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA >gi|299856450|gb|ADWV01000001.1| GENE 484 503379 - 503636 180 85 aa, chain + ## HITS:1 COG:no KEGG:B21_03082 NR:ns ## KEGG: B21_03082 # Name: yrdB # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 85 1 85 85 155 100.0 4e-37 MNQAIQFPDREEWDENKKCVCFPALVNGMQLTCAISGESLAYRFTGDTPEQWLASFRQHR WDLEEEAENLIQEQSEDDQGWVWLP >gi|299856450|gb|ADWV01000001.1| GENE 485 503612 - 504166 441 184 aa, chain - ## HITS:1 COG:ECs4145 KEGG:ns NR:ns ## COG: ECs4145 COG0663 # Protein_GI_number: 15833399 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli O157:H7 # 1 184 73 256 256 385 100.0 1e-107 MSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNI QDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVED DVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGN QTQP Prediction of potential genes in microbial genomes Time: Sun May 15 14:59:38 2011 Seq name: gi|299856449|gb|ADWV01000002.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont1.1, whole genome shotgun sequence Length of sequence - 414054 bp Number of predicted genes - 396, with homology - 395 Number of transcription units - 199, operones - 90 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 291 - 331 8.0 1 1 Tu 1 . - CDS 337 - 1221 980 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 1381 - 1440 4.1 + Prom 1328 - 1387 3.2 2 2 Tu 1 . + CDS 1412 - 1906 610 ## COG2862 Predicted membrane protein + Term 1914 - 1946 5.3 3 3 Tu 1 . - CDS 1946 - 2986 1026 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 3127 - 3186 3.3 + Prom 2969 - 3028 1.8 4 4 Tu 1 . + CDS 3143 - 4030 952 ## COG0412 Dienelactone hydrolase and related enzymes + Prom 4057 - 4116 2.5 5 5 Tu 1 . + CDS 4149 - 4436 307 ## ECIAI1_3148 hypothetical protein + Prom 4464 - 4523 3.5 6 6 Op 1 4/0.373 + CDS 4625 - 5743 1171 ## COG1740 Ni,Fe-hydrogenase I small subunit 7 6 Op 2 6/0.090 + CDS 5746 - 6732 1025 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 8 6 Op 3 4/0.373 + CDS 6722 - 7900 1594 ## COG5557 Polysulphide reductase 9 6 Op 4 5/0.179 + CDS 7897 - 9600 1921 ## COG0374 Ni,Fe-hydrogenase I large subunit 10 6 Op 5 . + CDS 9600 - 10094 561 ## COG0680 Ni,Fe-hydrogenase maturation factor 11 6 Op 6 . + CDS 10087 - 10575 554 ## SSON_3137 hydrogenase 2-specific chaperone 12 6 Op 7 4/0.373 + CDS 10568 - 10909 308 ## COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 13 6 Op 8 . + CDS 10922 - 11170 381 ## COG0298 Hydrogenase maturation factor - Term 11109 - 11147 2.1 14 7 Tu 1 . - CDS 11293 - 12159 1059 ## COG0625 Glutathione S-transferase - Prom 12221 - 12280 2.7 + Prom 12110 - 12169 3.1 15 8 Tu 1 . + CDS 12364 - 14223 2159 ## COG0754 Glutathionylspermidine synthase - Term 14029 - 14070 1.8 16 9 Tu 1 . - CDS 14315 - 14578 98 ## EcSMS35_3273 hypothetical protein - Prom 14654 - 14713 1.8 + Prom 14251 - 14310 5.2 17 10 Tu 1 . + CDS 14515 - 16014 1461 ## COG0306 Phosphate/sulphate permeases + Term 16021 - 16067 8.1 18 11 Tu 1 . - CDS 16063 - 16755 562 ## ECIAI1_3135 conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain - Prom 16779 - 16838 5.2 + Prom 16827 - 16886 5.0 19 12 Op 1 . + CDS 16944 - 17642 355 ## ECIAI1_3134 conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain 20 12 Op 2 . + CDS 17674 - 18432 688 ## ECO103_3668 hypothetical protein + Prom 18442 - 18501 2.0 21 13 Op 1 . + CDS 18628 - 19827 884 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 22 13 Op 2 . + CDS 19827 - 20651 616 ## ECIAI1_3131 hypothetical protein 23 13 Op 3 . + CDS 20663 - 21223 481 ## COG3054 Predicted transcriptional regulator 24 13 Op 4 22/0.000 + CDS 21254 - 22324 981 ## COG0795 Predicted permeases 25 13 Op 5 . + CDS 22321 - 23400 911 ## COG0795 Predicted permeases + Term 23478 - 23510 1.1 - Term 23386 - 23433 14.6 26 14 Op 1 . - CDS 23436 - 24608 1295 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 27 14 Op 2 . - CDS 24608 - 24856 285 ## S3224 hypothetical protein 28 14 Op 3 2/0.791 - CDS 24888 - 25802 800 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 29 14 Op 4 . - CDS 25799 - 27487 1176 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Prom 27637 - 27696 8.9 + Prom 27633 - 27692 7.0 30 15 Tu 1 . + CDS 27891 - 29033 991 ## c3711 hypothetical protein 31 16 Tu 1 . - CDS 29040 - 29804 597 ## COG2186 Transcriptional regulators - Prom 29883 - 29942 8.2 + Prom 29847 - 29906 2.3 32 17 Op 1 9/0.030 + CDS 30055 - 31554 1602 ## COG0277 FAD/FMN-containing dehydrogenases 33 17 Op 2 15/0.000 + CDS 31554 - 32606 1031 ## COG0277 FAD/FMN-containing dehydrogenases 34 17 Op 3 1/0.940 + CDS 32617 - 33840 1158 ## COG0247 Fe-S oxidoreductase 35 17 Op 4 1/0.940 + CDS 33845 - 34249 625 ## COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 36 17 Op 5 1/0.940 + CDS 34271 - 36442 2580 ## COG2225 Malate synthase + Term 36471 - 36516 -0.9 + Prom 36655 - 36714 4.4 37 18 Tu 1 . + CDS 36798 - 38480 1700 ## COG1620 L-lactate permease + Term 38490 - 38528 7.1 38 19 Op 1 . + CDS 38966 - 39394 196 ## E2348C_3253 predicted inner membrane lipoprotein 39 19 Op 2 . + CDS 39427 - 39648 92 ## COG3149 Type II secretory pathway, component PulM 40 20 Tu 1 . - CDS 40024 - 40173 107 ## gi|300815557|ref|ZP_07095781.1| conserved hypothetical protein - Prom 40213 - 40272 4.4 + Prom 40547 - 40606 7.3 41 21 Tu 1 . + CDS 40649 - 41377 415 ## COG3637 Opacity protein and related surface antigens + Term 41431 - 41471 7.2 + Prom 41733 - 41792 2.4 42 22 Tu 1 . + CDS 41849 - 43036 612 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Term 42941 - 42973 -0.8 43 23 Tu 1 . - CDS 43145 - 46660 1799 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits - Prom 46693 - 46752 2.6 - Term 47070 - 47108 9.9 44 24 Op 1 . - CDS 47112 - 48374 374 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 45 24 Op 2 . - CDS 48438 - 48659 66 ## EC55989_4689 hypothetical protein - Prom 48692 - 48751 2.4 - TRNA 48572 - 48647 84.1 # Phe GAA 0 0 46 25 Tu 1 . - CDS 48753 - 49460 590 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump + Prom 49680 - 49739 3.8 47 26 Tu 1 . + CDS 49858 - 51993 1743 ## COG1982 Arginine/lysine/ornithine decarboxylases + Term 52006 - 52039 -0.4 - Term 51988 - 52033 12.1 48 27 Tu 1 . - CDS 52043 - 53299 1468 ## COG0477 Permeases of the major facilitator superfamily - Prom 53405 - 53464 6.2 49 28 Op 1 6/0.090 - CDS 53501 - 54583 1052 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 50 28 Op 2 11/0.000 - CDS 54645 - 54920 373 ## COG2924 Fe-S cluster protector protein 51 28 Op 3 . - CDS 54948 - 56000 1089 ## PROTEIN SUPPORTED gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase - Prom 56110 - 56169 2.5 + Prom 56069 - 56128 3.6 52 29 Op 1 4/0.373 + CDS 56161 - 56880 772 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase 53 29 Op 2 . + CDS 56880 - 57206 463 ## COG3171 Uncharacterized protein conserved in bacteria + Term 57349 - 57379 3.0 54 30 Tu 1 . + CDS 57393 - 58109 926 ## ECO111_3709 hypothetical protein + Term 58119 - 58165 5.1 + Prom 58145 - 58204 6.0 55 31 Tu 1 . + CDS 58285 - 59331 1345 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D + Term 59339 - 59371 5.4 + Prom 59360 - 59419 4.2 56 32 Tu 1 . + CDS 59448 - 60455 904 ## ECO103_3539 hypothetical protein - Term 60504 - 60548 3.4 57 33 Op 1 13/0.000 - CDS 60610 - 61746 1123 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 58 33 Op 2 2/0.791 - CDS 61739 - 62332 1005 ## PROTEIN SUPPORTED gi|157155704|ref|YP_001464307.1| putative deoxyribonucleotide triphosphate pyrophosphatase 59 33 Op 3 6/0.090 - CDS 62340 - 62630 313 ## COG1872 Uncharacterized conserved protein 60 33 Op 4 5/0.179 - CDS 62627 - 63193 767 ## COG0762 Predicted integral membrane protein 61 33 Op 5 . - CDS 63211 - 63915 702 ## COG0325 Predicted enzyme with a TIM-barrel fold - Prom 63960 - 64019 3.0 + Prom 63625 - 63684 3.5 62 34 Tu 1 . + CDS 63933 - 64913 800 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT + Term 65052 - 65086 -0.2 - Term 64952 - 64995 3.2 63 35 Op 1 8/0.030 - CDS 65089 - 65505 490 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 64 35 Op 2 2/0.791 - CDS 65505 - 66068 616 ## COG1678 Putative transcriptional regulator - Prom 66105 - 66164 3.2 - Term 66086 - 66142 3.4 65 36 Op 1 2/0.791 - CDS 66177 - 67127 347 ## PROTEIN SUPPORTED gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme 66 36 Op 2 3/0.552 - CDS 67140 - 67871 552 ## COG1385 Uncharacterized protein conserved in bacteria 67 36 Op 3 6/0.090 - CDS 67951 - 68658 529 ## COG2356 Endonuclease I - Prom 68680 - 68739 4.1 68 37 Tu 1 4/0.373 - CDS 68753 - 69208 418 ## COG3091 Uncharacterized protein conserved in bacteria - Prom 69252 - 69311 2.8 - Term 69278 - 69321 3.1 69 38 Tu 1 . - CDS 69327 - 70721 1746 ## COG0477 Permeases of the major facilitator superfamily - Prom 70822 - 70881 9.3 - Term 71102 - 71134 3.0 70 39 Tu 1 . - CDS 71157 - 72311 1348 ## COG0192 S-adenosylmethionine synthetase + Prom 73026 - 73085 4.0 71 40 Tu 1 . + CDS 73106 - 75082 2366 ## COG1166 Arginine decarboxylase (spermidine biosynthesis) + Term 75100 - 75143 9.2 + Prom 75143 - 75202 7.2 72 41 Op 1 . + CDS 75228 - 75959 571 ## EC55989_3230 conserved hypothetical protein; putative exported protein + Term 76027 - 76071 7.4 + Prom 76016 - 76075 3.0 73 41 Op 2 . + CDS 76095 - 77015 1333 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family + Term 77027 - 77070 7.5 + Prom 77035 - 77094 5.2 74 42 Tu 1 . + CDS 77274 - 80072 2119 ## COG3933 Transcriptional antiterminator + Prom 80100 - 80159 3.4 75 43 Op 1 9/0.030 + CDS 80191 - 80619 472 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 76 43 Op 2 13/0.000 + CDS 80630 - 81115 702 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 77 43 Op 3 13/0.000 + CDS 81141 - 81890 1001 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 78 43 Op 4 . + CDS 81890 - 82747 1098 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 79 43 Op 5 . + CDS 82751 - 83248 469 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 80 43 Op 6 . + CDS 83255 - 83860 562 ## COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] 81 43 Op 7 . + CDS 83847 - 84590 657 ## ECIAI1_3062 hypothetical protein + Term 84607 - 84649 5.8 - Term 84509 - 84546 -0.4 82 44 Tu 1 . - CDS 84646 - 85404 803 ## COG0501 Zn-dependent protease with chaperone function - Prom 85426 - 85485 5.0 + Prom 85544 - 85603 3.8 83 45 Tu 1 . + CDS 85682 - 87673 2487 ## COG0021 Transketolase + Term 87684 - 87732 5.0 + Prom 87756 - 87815 6.3 84 46 Op 1 3/0.552 + CDS 87987 - 88430 397 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 85 46 Op 2 2/0.791 + CDS 88458 - 89846 1586 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component 86 46 Op 3 2/0.791 + CDS 89861 - 91138 1291 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 87 46 Op 4 3/0.552 + CDS 91135 - 92100 914 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 88 46 Op 5 3/0.552 + CDS 92122 - 92631 395 ## COG3722 Transcriptional regulator 89 46 Op 6 . + CDS 92628 - 93341 432 ## COG1072 Panthothenate kinase 90 47 Op 1 3/0.552 - CDS 93313 - 93990 182 ## PROTEIN SUPPORTED gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 91 47 Op 2 34/0.000 - CDS 93984 - 94661 550 ## COG1122 ABC-type cobalt transport system, ATPase component 92 47 Op 3 . - CDS 94649 - 95356 417 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 93 47 Op 4 . - CDS 95357 - 95935 686 ## EC55989_3217 putative ABC-type transport system 94 47 Op 5 . - CDS 95958 - 96389 379 ## COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif - Prom 96611 - 96670 6.1 + Prom 96570 - 96629 3.3 95 48 Op 1 26/0.000 + CDS 96761 - 97780 808 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 96 48 Op 2 9/0.030 + CDS 97830 - 98993 1424 ## COG0126 3-phosphoglycerate kinase + Term 99003 - 99033 3.0 + Prom 99008 - 99067 6.7 97 49 Tu 1 4/0.373 + CDS 99208 - 100287 1193 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 100312 - 100340 2.1 + Prom 100502 - 100561 3.9 98 50 Tu 1 . + CDS 100645 - 101505 992 ## COG0668 Small-conductance mechanosensitive channel + Term 101514 - 101553 5.0 + Prom 101557 - 101616 5.7 99 51 Op 1 5/0.179 + CDS 101644 - 102279 622 ## COG1279 Lysine efflux permease 100 51 Op 2 2/0.791 + CDS 102372 - 103112 785 ## COG2968 Uncharacterized conserved protein + Term 103135 - 103168 -0.3 + Prom 103138 - 103197 6.2 101 52 Tu 1 . + CDS 103279 - 104175 741 ## COG0583 Transcriptional regulator 102 53 Op 1 . - CDS 104172 - 105650 1270 ## COG0427 Acetyl-CoA hydrolase 103 53 Op 2 . - CDS 105674 - 106459 929 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 104 53 Op 3 6/0.090 - CDS 106470 - 107465 854 ## COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family 105 53 Op 4 3/0.552 - CDS 107458 - 109602 2307 ## COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit - Prom 109720 - 109779 4.1 - Term 109760 - 109792 2.5 106 54 Tu 1 . - CDS 109806 - 110699 867 ## COG0583 Transcriptional regulator + Prom 110739 - 110798 3.5 107 55 Op 1 . + CDS 110841 - 111026 111 ## COG0583 Transcriptional regulator 108 55 Op 2 8/0.030 + CDS 111082 - 111741 834 ## COG0120 Ribose 5-phosphate isomerase + Prom 111892 - 111951 4.4 109 56 Tu 1 . + CDS 111997 - 113229 1369 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Term 113251 - 113287 7.1 - Term 113802 - 113833 3.2 110 57 Tu 1 . - CDS 114010 - 114612 467 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 111 58 Tu 1 . - CDS 114858 - 115187 369 ## COG3027 Uncharacterized protein conserved in bacteria - Prom 115246 - 115305 3.1 + Prom 115267 - 115326 1.5 112 59 Op 1 5/0.179 + CDS 115355 - 115933 657 ## COG3079 Uncharacterized protein conserved in bacteria 113 59 Op 2 8/0.030 + CDS 115959 - 117284 1389 ## COG0006 Xaa-Pro aminopeptidase 114 59 Op 3 8/0.030 + CDS 117281 - 118459 1032 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 115 59 Op 4 5/0.179 + CDS 118482 - 119684 1284 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases + Term 119728 - 119763 4.1 + Prom 119764 - 119823 7.8 116 60 Op 1 18/0.000 + CDS 119972 - 121225 1392 ## COG0404 Glycine cleavage system T protein (aminomethyltransferase) 117 60 Op 2 12/0.000 + CDS 121249 - 121638 531 ## COG0509 Glycine cleavage system H protein (lipoate-binding) + Term 121668 - 121712 2.3 + Prom 121676 - 121735 1.8 118 60 Op 3 1/0.940 + CDS 121757 - 124630 3504 ## COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain + Term 124656 - 124681 -0.5 119 61 Tu 1 . + CDS 124904 - 125647 253 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 120 62 Tu 1 . - CDS 125704 - 127143 1630 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Prom 127167 - 127226 3.3 + Prom 126889 - 126948 3.2 121 63 Tu 1 . + CDS 127182 - 127493 377 ## COG3097 Uncharacterized protein conserved in bacteria + Prom 127523 - 127582 3.5 122 64 Tu 1 . + CDS 127657 - 128316 737 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 128349 - 128401 7.1 - Term 128335 - 128389 3.7 123 65 Tu 1 . - CDS 128393 - 129373 1183 ## COG0354 Predicted aminomethyltransferase related to GcvT - Prom 129406 - 129465 3.1 + Prom 129324 - 129383 3.7 124 66 Op 1 . + CDS 129616 - 129882 301 ## COG2938 Uncharacterized conserved protein 125 66 Op 2 . + CDS 129863 - 130270 259 ## ECO103_3471 hypothetical protein + Term 130301 - 130351 2.6 - Term 130261 - 130303 1.2 126 67 Tu 1 . - CDS 130310 - 130831 774 ## COG0716 Flavodoxins - Prom 130863 - 130922 3.4 + Prom 130860 - 130919 4.8 127 68 Op 1 8/0.030 + CDS 130943 - 131839 798 ## COG4974 Site-specific recombinase XerD 128 68 Op 2 7/0.060 + CDS 131864 - 132574 795 ## COG1651 Protein-disulfide isomerase 129 68 Op 3 5/0.179 + CDS 132580 - 134313 1915 ## COG0608 Single-stranded DNA-specific exonuclease + Term 134337 - 134371 2.6 + Prom 134378 - 134437 1.7 130 69 Op 1 8/0.030 + CDS 134621 - 135502 1002 ## COG1186 Protein chain release factor B 131 69 Op 2 . + CDS 135512 - 137029 2143 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 137050 - 137080 2.1 132 70 Tu 1 . - CDS 137072 - 137620 428 ## COG1443 Isopentenyldiphosphate isomerase - Prom 137645 - 137704 3.6 - Term 137693 - 137721 -0.3 133 71 Op 1 . - CDS 137743 - 137868 95 ## 134 71 Op 2 . - CDS 137870 - 139318 375 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Prom 139616 - 139675 6.0 135 72 Op 1 3/0.552 + CDS 139739 - 141673 1114 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 136 72 Op 2 . + CDS 141673 - 142161 234 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 + Term 142168 - 142204 6.7 - Term 142154 - 142191 6.1 137 73 Op 1 2/0.791 - CDS 142197 - 143564 1280 ## COG2252 Permeases 138 73 Op 2 4/0.373 - CDS 143600 - 144916 1418 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 139 73 Op 3 2/0.791 - CDS 144934 - 146334 292 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Term 146462 - 146489 1.5 140 74 Op 1 12/0.000 - CDS 146499 - 149369 3000 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 141 74 Op 2 2/0.791 - CDS 149366 - 150145 859 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 142 74 Op 3 1/0.940 - CDS 150196 - 151524 1324 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 143 74 Op 4 3/0.552 - CDS 151527 - 154625 2783 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Prom 154728 - 154787 10.7 144 75 Tu 1 . - CDS 154947 - 155525 187 ## COG2068 Uncharacterized MobA-related protein - Prom 155627 - 155686 6.3 145 76 Op 1 . + CDS 155796 - 156398 185 ## ECIAI1_2996 hypothetical protein 146 76 Op 2 . + CDS 156446 - 158071 1356 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family - Term 158068 - 158105 7.2 147 77 Op 1 . - CDS 158112 - 159044 1227 ## COG0549 Carbamate kinase 148 77 Op 2 4/0.373 - CDS 159092 - 160477 1100 ## COG0044 Dihydroorotase and related cyclic amidohydrolases - Term 160480 - 160512 5.0 149 78 Op 1 4/0.373 - CDS 160530 - 161741 1587 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 150 78 Op 2 2/0.791 - CDS 161799 - 162995 1185 ## COG1171 Threonine dehydratase - Term 163013 - 163046 5.2 151 78 Op 3 . - CDS 163053 - 164240 1538 ## COG0078 Ornithine carbamoyltransferase 152 79 Tu 1 . + CDS 164719 - 166497 946 ## COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains + Term 166505 - 166547 11.1 153 80 Op 1 15/0.000 - CDS 166537 - 167016 267 ## COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 154 80 Op 2 12/0.000 - CDS 167013 - 167891 632 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 155 80 Op 3 . - CDS 167902 - 170199 1899 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs - Prom 170270 - 170329 3.5 + Prom 170529 - 170588 4.1 156 81 Tu 1 . + CDS 170614 - 171369 373 ## COG0739 Membrane proteins related to metalloendopeptidases + TRNA 171448 - 171521 78.8 # Gly CCC 0 0 + Prom 171977 - 172036 3.9 157 82 Tu 1 . + CDS 172064 - 172363 195 ## gi|300815688|ref|ZP_07095912.1| conserved domain protein + Term 172414 - 172458 0.0 + Prom 175159 - 175218 6.2 158 83 Op 1 . + CDS 175303 - 175491 302 ## gi|300815692|ref|ZP_07095916.1| conserved hypothetical protein 159 83 Op 2 . + CDS 175514 - 175681 228 ## gi|300902712|ref|ZP_07120672.1| conserved domain protein 160 83 Op 3 . + CDS 175733 - 176425 311 ## ECO26_0306 hypothetical protein 161 83 Op 4 . + CDS 176437 - 176715 155 ## ECO26_0307 hypothetical protein + Term 176760 - 176798 -0.2 + Prom 176733 - 176792 4.2 162 84 Op 1 . + CDS 176846 - 177253 142 ## ECO26_0308 hypothetical protein 163 84 Op 2 . + CDS 177255 - 177593 256 ## ECO26_0309 hypothetical protein + Term 177630 - 177677 0.5 164 85 Op 1 . + CDS 177943 - 178155 200 ## ECO26_0310 hypothetical protein 165 85 Op 2 . + CDS 178152 - 178514 213 ## ECO26_0311 hypothetical protein 166 85 Op 3 . + CDS 178533 - 179561 796 ## ECO26_0312 hypothetical protein + Term 179578 - 179619 5.5 + Prom 179567 - 179626 7.8 167 86 Tu 1 . + CDS 179647 - 179847 188 ## ECO26_0313 hypothetical protein + Term 179918 - 179957 -0.7 - Term 179568 - 179605 0.0 168 87 Tu 1 . - CDS 179782 - 180048 223 ## COG1662 Transposase and inactivated derivatives, IS1 family - Prom 180194 - 180253 2.0 169 88 Tu 1 . + CDS 180231 - 180446 89 ## SbBS512_E3230 putative IS1 encoded protein + Prom 180495 - 180554 5.1 170 89 Op 1 . + CDS 180642 - 182471 944 ## APECO1_1717 hypothetical protein 171 89 Op 2 . + CDS 182506 - 183219 385 ## APECO1_1716 hypothetical protein - Term 183251 - 183290 2.1 172 90 Tu 1 . - CDS 183314 - 183928 188 ## ECL_04197 putative integrase + Prom 184688 - 184747 6.7 173 91 Tu 1 . + CDS 184875 - 186485 601 ## ECIAI1_2983 hypothetical protein + Prom 187132 - 187191 7.8 174 92 Op 1 7/0.060 + CDS 187223 - 187564 364 ## COG1886 Flagellar motor switch/type III secretory pathway protein 175 92 Op 2 7/0.060 + CDS 187554 - 188219 118 ## COG4790 Type III secretory pathway, component EscR 176 92 Op 3 8/0.030 + CDS 188229 - 188414 139 ## COG4794 Type III secretory pathway, component EscS 177 92 Op 4 2/0.791 + CDS 188490 - 189257 214 ## COG4791 Type III secretory pathway, component EscT 178 92 Op 5 . + CDS 189266 - 189997 264 ## COG1377 Flagellar biosynthesis pathway, component FlhB 179 92 Op 6 . + CDS 190024 - 190386 209 ## COG1377 Flagellar biosynthesis pathway, component FlhB + Term 190411 - 190457 8.3 - Term 190397 - 190445 12.5 180 93 Op 1 . - CDS 190447 - 190740 65 ## EC55989_3142 hypothetical protein 181 93 Op 2 . - CDS 190742 - 191242 193 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 191270 - 191329 6.7 + Prom 191340 - 191399 11.4 182 94 Op 1 . + CDS 191500 - 192681 388 ## EcE24377A_3179 type III secretion apparatus protein EprH 183 94 Op 2 . + CDS 192695 - 192850 101 ## ECO103_3423 type III secretion protein EprI + Prom 192885 - 192944 3.5 184 95 Op 1 . + CDS 193027 - 193242 91 ## ECUMN_3189 conserved hypothetical protein, putative type III secretion apparatus protein 185 95 Op 2 . + CDS 193283 - 194017 11 ## COG4669 Type III secretory pathway, lipoprotein EscJ 186 95 Op 3 . + CDS 194033 - 194614 -96 ## ECSE_3117 hypothetical protein + Prom 194637 - 194696 4.2 187 96 Tu 1 . + CDS 194831 - 195262 82 ## EC55989_3135 hypothetical protein + Prom 195352 - 195411 8.8 188 97 Op 1 . + CDS 195483 - 195638 132 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 189 97 Op 2 . + CDS 195672 - 196115 84 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 190 98 Tu 1 . - CDS 196160 - 196396 88 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 196457 - 196516 7.0 + Prom 196314 - 196373 7.4 191 99 Tu 1 . + CDS 196434 - 196652 138 ## ECSE_3112 hypothetical protein + Term 196670 - 196707 3.2 - Term 196656 - 196695 4.4 192 100 Tu 1 . - CDS 196719 - 196937 176 ## JW5456 hypothetical protein - Prom 196993 - 197052 4.7 193 101 Tu 1 . - CDS 197105 - 198481 210 ## COG0457 FOG: TPR repeat - Prom 198608 - 198667 4.8 - Term 198743 - 198791 11.3 194 102 Tu 1 . - CDS 198816 - 199307 265 ## COG0457 FOG: TPR repeat - Prom 199546 - 199605 5.7 + Prom 199958 - 200017 4.2 195 103 Tu 1 . + CDS 200216 - 200641 121 ## ECUMN_3178 hypothetical protein 196 104 Tu 1 . - CDS 201264 - 201599 174 ## COG3710 DNA-binding winged-HTH domains - Prom 201621 - 201680 3.4 - Term 202333 - 202372 6.1 197 105 Tu 1 . - CDS 202407 - 202925 143 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 203165 - 203224 7.6 - Term 203438 - 203492 15.1 198 106 Tu 1 . - CDS 203499 - 204728 582 ## COG0814 Amino acid permeases - Prom 204763 - 204822 4.3 + Prom 204877 - 204936 6.0 199 107 Tu 1 . + CDS 204983 - 206164 1049 ## COG0183 Acetyl-CoA acetyltransferase + Prom 206290 - 206349 5.8 200 108 Op 1 9/0.030 + CDS 206559 - 207287 665 ## COG3717 5-keto 4-deoxyuronate isomerase 201 108 Op 2 9/0.030 + CDS 207317 - 208078 766 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 208099 - 208132 4.5 + Prom 208160 - 208219 6.6 202 109 Tu 1 . + CDS 208446 - 209804 1424 ## COG0477 Permeases of the major facilitator superfamily + Term 209811 - 209850 10.2 203 110 Tu 1 . + CDS 209933 - 210625 758 ## COG1794 Aspartate racemase + Term 210842 - 210890 -1.0 204 111 Tu 1 . - CDS 210612 - 211547 821 ## COG0583 Transcriptional regulator - Prom 211631 - 211690 6.7 + Prom 211577 - 211636 9.1 205 112 Tu 1 . + CDS 211669 - 212931 1263 ## COG0019 Diaminopimelate decarboxylase - Term 212729 - 212768 0.1 206 113 Tu 1 . - CDS 212938 - 213969 923 ## COG1609 Transcriptional regulators + Prom 214460 - 214519 3.2 207 114 Op 1 5/0.179 + CDS 214555 - 216714 2000 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 208 114 Op 2 . + CDS 216707 - 217900 1387 ## COG0477 Permeases of the major facilitator superfamily + Term 217904 - 217941 8.0 - Term 217892 - 217929 8.0 209 115 Tu 1 . - CDS 217932 - 218972 1158 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 218998 - 219057 7.3 - Term 219038 - 219075 5.1 210 116 Tu 1 . - CDS 219080 - 219298 287 ## G2583_3488 hypothetical protein - Prom 219368 - 219427 3.6 - Term 219387 - 219432 2.7 211 117 Op 1 5/0.179 - CDS 219436 - 220149 797 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance 212 117 Op 2 . - CDS 220218 - 220907 689 ## COG3066 DNA mismatch repair protein - Prom 220953 - 221012 4.3 + Prom 220953 - 221012 3.5 213 118 Tu 1 . + CDS 221093 - 221239 64 ## ECO103_3390 hypothetical protein + Prom 221293 - 221352 5.8 214 119 Op 1 7/0.060 + CDS 221592 - 222122 268 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 215 119 Op 2 5/0.179 + CDS 222135 - 224381 2148 ## COG3605 Signal transduction protein containing GAF and PtsI domains 216 120 Op 1 11/0.000 + CDS 224532 - 225407 1149 ## COG0682 Prolipoprotein diacylglyceryltransferase 217 120 Op 2 4/0.373 + CDS 225435 - 226208 837 ## COG0207 Thymidylate synthase + Term 226231 - 226260 0.4 + Prom 226223 - 226282 3.6 218 121 Op 1 12/0.000 + CDS 226392 - 226862 237 ## COG2165 Type II secretory pathway, pseudopilin PulG 219 121 Op 2 . + CDS 226853 - 227416 626 ## COG4795 Type II secretory pathway, component PulJ 220 121 Op 3 . + CDS 227413 - 227820 218 ## EC55989_3100 hypothetical protein 221 121 Op 4 5/0.179 + CDS 227805 - 228128 111 ## COG4967 Tfp pilus assembly protein PilV 222 121 Op 5 5/0.179 + CDS 228141 - 231509 3090 ## COG1330 Exonuclease V gamma subunit + Prom 231588 - 231647 3.0 223 122 Op 1 5/0.179 + CDS 231685 - 234573 2906 ## COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like 224 122 Op 2 13/0.000 + CDS 234566 - 238108 3091 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 225 122 Op 3 . + CDS 238108 - 239934 1393 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member + Term 239941 - 239997 5.6 - Term 239924 - 239991 6.0 226 123 Tu 1 . - CDS 239996 - 241327 1354 ## COG0548 Acetylglutamate kinase - Prom 241432 - 241491 5.6 + Prom 241350 - 241409 7.1 227 124 Tu 1 . + CDS 241559 - 242812 1274 ## COG0860 N-acetylmuramoyl-L-alanine amidase - TRNA 242887 - 242963 86.1 # Met CAT 0 0 - TRNA 242997 - 243073 86.1 # Met CAT 0 0 - TRNA 243107 - 243183 86.1 # Met CAT 0 0 + Prom 243207 - 243266 4.4 228 125 Op 1 8/0.030 + CDS 243392 - 244489 1176 ## COG2821 Membrane-bound lytic murein transglycosylase + Term 244526 - 244559 4.1 229 125 Op 2 . + CDS 244566 - 245372 868 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 + Term 245378 - 245426 11.2 - Term 245366 - 245413 7.2 230 126 Op 1 7/0.060 - CDS 245423 - 245866 453 ## COG2166 SufE protein probably involved in Fe-S center assembly 231 126 Op 2 . - CDS 245866 - 247071 1045 ## COG0520 Selenocysteine lyase - Prom 247199 - 247258 5.2 + Prom 247184 - 247243 4.3 232 127 Tu 1 . + CDS 247263 - 247490 382 ## ECIAI1_2919 hypothetical protein + Prom 247762 - 247821 9.4 233 128 Op 1 6/0.090 + CDS 247841 - 248758 623 ## COG0583 Transcriptional regulator 234 128 Op 2 5/0.179 + CDS 248777 - 249172 472 ## COG2363 Uncharacterized small membrane protein 235 128 Op 3 . + CDS 249165 - 250265 1147 ## COG2933 Predicted SAM-dependent methyltransferase - Term 250257 - 250297 1.2 236 129 Tu 1 4/0.373 - CDS 250309 - 251040 546 ## COG1349 Transcriptional regulators of sugar metabolism - Term 251053 - 251084 3.5 237 130 Op 1 5/0.179 - CDS 251098 - 251520 434 ## COG4154 Fucose dissimilation pathway protein FucU 238 130 Op 2 4/0.373 - CDS 251522 - 252970 980 ## COG1070 Sugar (pentulose and hexulose) kinases 239 130 Op 3 3/0.552 - CDS 253049 - 254824 1888 ## COG2407 L-fucose isomerase and related proteins 240 130 Op 4 . - CDS 254857 - 256173 821 ## COG0738 Fucose permease - Prom 256289 - 256348 6.7 + Prom 256636 - 256695 2.2 241 131 Op 1 5/0.179 + CDS 256720 - 257367 635 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 242 131 Op 2 . + CDS 257395 - 258543 1263 ## COG1454 Alcohol dehydrogenase, class IV + Term 258675 - 258712 1.0 - Term 258549 - 258591 8.2 243 132 Tu 1 . - CDS 258598 - 259353 478 ## COG0258 5'-3' exonuclease (including N-terminal domain of PolI) - Prom 259374 - 259433 2.7 244 133 Op 1 10/0.015 - CDS 259465 - 260832 1437 ## COG1760 L-serine deaminase - Term 260850 - 260881 3.9 245 133 Op 2 4/0.373 - CDS 260890 - 262179 1481 ## COG0814 Amino acid permeases - Prom 262375 - 262434 6.8 - Term 262690 - 262725 4.0 246 134 Tu 1 6/0.090 - CDS 262736 - 264100 1396 ## COG1611 Predicted Rossmann fold nucleotide-binding protein - Prom 264136 - 264195 1.7 247 135 Tu 1 . - CDS 264212 - 265060 653 ## COG0780 Enzyme related to GTP cyclohydrolase I - Prom 265152 - 265211 3.6 + Prom 265035 - 265094 3.5 248 136 Tu 1 . + CDS 265128 - 265673 480 ## ECO103_3336 SecY interacting protein Syd + Term 265756 - 265810 0.5 + Prom 266211 - 266270 6.7 249 137 Op 1 7/0.060 + CDS 266295 - 266624 336 ## COG3098 Uncharacterized protein conserved in bacteria 250 137 Op 2 5/0.179 + CDS 266624 - 267406 193 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family 251 137 Op 3 4/0.373 + CDS 267424 - 267873 610 ## COG0716 Flavodoxins + Term 267896 - 267930 -0.1 + Prom 268113 - 268172 5.7 252 138 Op 1 7/0.060 + CDS 268308 - 269660 1521 ## COG0477 Permeases of the major facilitator superfamily 253 138 Op 2 5/0.179 + CDS 269662 - 271002 1459 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 254 138 Op 3 . + CDS 271023 - 272363 1679 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Term 272361 - 272403 5.0 255 139 Tu 1 . - CDS 272595 - 275351 2520 ## COG0642 Signal transduction histidine kinase - Prom 275409 - 275468 3.6 + Prom 275139 - 275198 1.6 256 140 Op 1 8/0.030 + CDS 275408 - 276709 938 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 257 140 Op 2 3/0.552 + CDS 276757 - 278991 2351 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases + Term 279004 - 279037 1.1 258 141 Op 1 8/0.030 + CDS 279069 - 279317 273 ## COG2336 Growth regulator 259 141 Op 2 3/0.552 + CDS 279317 - 279652 202 ## COG2337 Growth inhibitor 260 141 Op 3 5/0.179 + CDS 279723 - 280514 1058 ## COG1694 Predicted pyrophosphatase + Term 280528 - 280581 1.1 + Prom 280634 - 280693 5.3 261 142 Op 1 8/0.030 + CDS 280742 - 282379 1701 ## COG0504 CTP synthase (UTP-ammonia lyase) + Term 282398 - 282435 9.1 262 142 Op 2 . + CDS 282467 - 283765 1619 ## COG0148 Enolase + Term 283790 - 283821 4.1 - Term 283778 - 283809 4.1 263 143 Op 1 . - CDS 283825 - 284697 193 ## COG1512 Beta-propeller domains of methanol dehydrogenase type 264 143 Op 2 . - CDS 284711 - 284851 182 ## EcE24377A_3081 hypothetical protein - Prom 284912 - 284971 4.2 + Prom 284706 - 284765 5.9 265 144 Tu 1 . + CDS 284990 - 285661 218 ## PROTEIN SUPPORTED gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 + Term 285680 - 285732 5.1 266 145 Tu 1 . - CDS 285979 - 286764 -79 ## ECB_02621 hypothetical protein - Prom 286865 - 286924 1.9 267 146 Op 1 6/0.090 - CDS 287888 - 289366 1487 ## COG1070 Sugar (pentulose and hexulose) kinases 268 146 Op 2 . - CDS 289393 - 290520 1233 ## COG0477 Permeases of the major facilitator superfamily - Prom 290571 - 290630 3.4 269 147 Op 1 8/0.030 + CDS 290988 - 291773 180 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 270 147 Op 2 5/0.179 + CDS 291843 - 293297 1374 ## COG0277 FAD/FMN-containing dehydrogenases + Term 293305 - 293347 8.0 271 148 Op 1 3/0.552 + CDS 293391 - 294728 1132 ## COG0477 Permeases of the major facilitator superfamily 272 148 Op 2 29/0.000 + CDS 294706 - 295485 748 ## COG2086 Electron transfer flavoprotein, beta subunit 273 148 Op 3 . + CDS 295482 - 296342 727 ## COG2025 Electron transfer flavoprotein, alpha subunit + Term 296553 - 296585 0.3 - Term 296445 - 296481 -0.8 274 149 Op 1 2/0.791 - CDS 296490 - 297065 564 ## COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 275 149 Op 2 12/0.000 - CDS 297082 - 297342 227 ## COG2440 Ferredoxin-like protein 276 149 Op 3 1/0.940 - CDS 297333 - 298604 722 ## COG0644 Dehydrogenases (flavoproteins) 277 149 Op 4 . - CDS 298682 - 299044 430 ## COG0720 6-pyruvoyl-tetrahydropterin synthase - Prom 299137 - 299196 3.4 + Prom 299141 - 299200 6.0 278 150 Op 1 11/0.000 + CDS 299363 - 301162 1815 ## COG0369 Sulfite reductase, alpha subunit (flavoprotein) 279 150 Op 2 11/0.000 + CDS 301162 - 302874 1943 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) 280 150 Op 3 . + CDS 302948 - 303682 962 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes + Term 303703 - 303740 5.3 + Prom 303712 - 303771 3.9 281 151 Op 1 . + CDS 303947 - 304099 164 ## G2583_3410 small toxic membrane polypeptide 282 151 Op 2 . + CDS 304176 - 305288 284 ## COG3385 FOG: Transposase and inactivated derivatives 283 151 Op 3 . + CDS 305311 - 305451 62 ## APECO1_O1CoBM122 hypothetical protein + Prom 305505 - 305564 8.8 284 152 Op 1 . + CDS 305642 - 308341 1476 ## COG1203 Predicted helicases 285 152 Op 2 . + CDS 308439 - 310001 1103 ## ECSE_3015 hypothetical protein 286 152 Op 3 . + CDS 309998 - 310534 388 ## EC55989_3032 hypothetical protein 287 152 Op 4 . + CDS 310546 - 311601 1270 ## ECSE_3013 hypothetical protein 288 152 Op 5 . + CDS 311612 - 312358 521 ## ECH74115_4010 CRISPR-associated protein Cas5 289 152 Op 6 . + CDS 312340 - 312990 385 ## ECO103_3298 hypothetical protein 290 152 Op 7 . + CDS 312987 - 313910 631 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 291 152 Op 8 . + CDS 313907 - 314200 212 ## ECIAI1_2857 hypothetical protein + Prom 314204 - 314263 3.1 292 152 Op 9 . + CDS 314288 - 314443 59 ## gi|300815835|ref|ZP_07096059.1| conserved hypothetical protein - Term 314836 - 314868 -0.3 293 153 Tu 1 . - CDS 314894 - 315931 686 ## COG2234 Predicted aminopeptidases - Prom 315965 - 316024 3.9 + Prom 315946 - 316005 4.2 294 154 Op 1 18/0.000 + CDS 316183 - 317091 1147 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 295 154 Op 2 7/0.060 + CDS 317093 - 318520 1591 ## COG2895 GTPases - Sulfate adenylate transferase subunit 1 296 154 Op 3 . + CDS 318520 - 319125 573 ## COG0529 Adenylylsulfate kinase and related kinases 297 154 Op 4 . + CDS 319175 - 319498 467 ## EcSMS35_2875 hypothetical protein + Prom 319507 - 319566 3.4 298 155 Op 1 11/0.000 + CDS 319692 - 320003 224 ## COG2919 Septum formation initiator 299 155 Op 2 . + CDS 320022 - 320732 315 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 300 155 Op 3 8/0.030 + CDS 320732 - 322258 1743 ## COG0585 Uncharacterized conserved protein 301 155 Op 4 13/0.000 + CDS 322239 - 323000 690 ## COG0496 Predicted acid phosphatase 302 155 Op 5 11/0.000 + CDS 322994 - 323620 549 ## COG2518 Protein-L-isoaspartate carboxylmethyltransferase + Prom 323671 - 323730 2.1 303 155 Op 6 8/0.030 + CDS 323760 - 324899 620 ## COG0739 Membrane proteins related to metalloendopeptidases 304 155 Op 7 . + CDS 324962 - 325954 1163 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 325969 - 326012 10.8 - Term 325961 - 325996 2.7 305 156 Tu 1 . - CDS 326075 - 326482 273 ## COG1846 Transcriptional regulators - Prom 326583 - 326642 3.5 + Prom 326536 - 326595 3.9 306 157 Op 1 6/0.090 + CDS 326629 - 327222 560 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase 307 157 Op 2 . + CDS 327222 - 328649 1844 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 308 157 Op 3 . + CDS 328660 - 328896 327 ## ECO111_3461 hypothetical protein + Term 328903 - 328934 3.4 - Term 328886 - 328928 9.3 309 158 Op 1 1/0.940 - CDS 328935 - 330299 1240 ## COG2610 H+/gluconate symporter and related permeases 310 158 Op 2 4/0.373 - CDS 330388 - 331164 729 ## COG3622 Hydroxypyruvate isomerase 311 158 Op 3 6/0.090 - CDS 331169 - 331807 431 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 312 158 Op 4 5/0.179 - CDS 331804 - 333066 1036 ## COG3395 Uncharacterized protein conserved in bacteria 313 158 Op 5 . - CDS 333063 - 333971 890 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases - Prom 334053 - 334112 4.8 + Prom 333957 - 334016 5.8 314 159 Tu 1 . + CDS 334167 - 334934 539 ## COG1349 Transcriptional regulators of sugar metabolism + Term 334952 - 335000 3.6 - Term 334924 - 334972 0.0 315 160 Tu 1 . - CDS 334985 - 335641 422 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - Prom 335663 - 335722 8.0 316 161 Op 1 . - CDS 335747 - 338308 3318 ## COG0249 Mismatch repair ATPase (MutS family) 317 161 Op 2 . - CDS 338305 - 338538 102 ## gi|300922251|ref|ZP_07138377.1| conserved domain protein - Prom 338624 - 338683 6.0 + Prom 338308 - 338367 5.3 318 162 Tu 1 . + CDS 338595 - 338948 349 ## ECO103_3270 hypothetical protein + Term 338951 - 338988 7.8 319 163 Tu 1 3/0.552 - CDS 338985 - 341048 2285 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains - Term 341069 - 341097 3.0 320 164 Op 1 4/0.373 - CDS 341137 - 342147 1198 ## COG0309 Hydrogenase maturation factor 321 164 Op 2 13/0.000 - CDS 342144 - 343265 1037 ## COG0409 Hydrogenase maturation factor 322 164 Op 3 8/0.030 - CDS 343265 - 343537 345 ## COG0298 Hydrogenase maturation factor 323 164 Op 4 11/0.000 - CDS 343528 - 344400 787 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 324 164 Op 5 . - CDS 344404 - 344754 123 ## COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) - Prom 344870 - 344929 5.6 + Prom 344855 - 344914 4.6 325 165 Tu 1 . + CDS 344966 - 345427 408 ## ECO103_3263 formate hydrogenlyase regulatory protein HycA + Term 345476 - 345526 10.1 326 166 Op 1 4/0.373 + CDS 345552 - 346163 321 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 327 166 Op 2 10/0.015 + CDS 346160 - 347986 2145 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 328 166 Op 3 7/0.060 + CDS 347989 - 348912 1450 ## COG0650 Formate hydrogenlyase subunit 4 329 166 Op 4 5/0.179 + CDS 348930 - 350639 2297 ## COG3261 Ni,Fe-hydrogenase III large subunit 330 166 Op 5 6/0.090 + CDS 350649 - 351191 500 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 331 166 Op 6 . + CDS 351191 - 351958 872 ## COG3260 Ni,Fe-hydrogenase III small subunit 332 166 Op 7 . + CDS 351955 - 352365 486 ## B21_02533 hypothetical protein 333 166 Op 8 . + CDS 352391 - 352828 607 ## COG0680 Ni,Fe-hydrogenase maturation factor + Term 352900 - 352937 3.5 - Term 352886 - 352924 5.1 334 167 Op 1 8/0.030 - CDS 352987 - 354411 1638 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 335 167 Op 2 . - CDS 354420 - 355877 1830 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 356127 - 356186 2.8 + Prom 355967 - 356026 5.9 336 168 Tu 1 . + CDS 356137 - 357147 883 ## COG1609 Transcriptional regulators + Term 357162 - 357201 3.0 + Prom 357199 - 357258 3.8 337 169 Tu 1 . + CDS 357296 - 357823 415 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 338 170 Tu 1 . + CDS 357976 - 360228 1684 ## COG0068 Hydrogenase maturation factor + Term 360303 - 360347 4.1 - Term 360355 - 360390 0.1 339 171 Op 1 5/0.179 - CDS 360454 - 361587 999 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 340 171 Op 2 . - CDS 361584 - 363023 1406 ## COG0426 Uncharacterized flavoproteins - Prom 363101 - 363160 3.8 + Prom 363077 - 363136 9.6 341 172 Tu 1 . + CDS 363210 - 364724 1525 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains 342 173 Op 1 . - CDS 364721 - 365686 1199 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 343 173 Op 2 4/0.373 - CDS 365679 - 366452 685 ## COG1349 Transcriptional regulators of sugar metabolism 344 173 Op 3 5/0.179 - CDS 366519 - 366878 317 ## COG4578 Glucitol operon activator - Prom 366915 - 366974 3.2 345 174 Op 1 5/0.179 - CDS 366984 - 367763 883 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 346 174 Op 2 6/0.090 - CDS 367767 - 368138 248 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 347 174 Op 3 6/0.090 - CDS 368149 - 369108 1088 ## COG3732 Phosphotransferase system sorbitol-specific component IIBC 348 174 Op 4 . - CDS 369105 - 369668 663 ## COG3730 Phosphotransferase system sorbitol-specific component IIC - Prom 369792 - 369851 6.0 + Prom 369731 - 369790 4.8 349 175 Tu 1 . + CDS 369924 - 371009 1083 ## COG2951 Membrane-bound lytic murein transglycosylase B + Prom 371027 - 371086 2.6 350 176 Op 1 12/0.000 + CDS 371154 - 371651 301 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 351 176 Op 2 14/0.000 + CDS 371731 - 372792 1492 ## COG0468 RecA/RadA recombinase + Term 372978 - 373022 4.2 352 176 Op 3 . + CDS 373035 - 373535 583 ## COG2137 Uncharacterized protein conserved in bacteria + Term 373592 - 373645 12.0 353 177 Tu 1 . - CDS 373576 - 373758 146 ## ECSP_3645 hypothetical protein - Prom 373914 - 373973 1.9 354 178 Tu 1 . + CDS 373663 - 376293 2999 ## COG0013 Alanyl-tRNA synthetase + Prom 376341 - 376400 4.1 355 179 Tu 1 . + CDS 376528 - 376713 204 ## PROTEIN SUPPORTED gi|167855109|ref|ZP_02477881.1| 30S ribosomal protein S1 + TRNA 377029 - 377121 72.5 # Ser GCT 0 0 + TRNA 377125 - 377201 87.2 # Arg ACG 0 0 + TRNA 377399 - 377475 87.2 # Arg ACG 0 0 + TRNA 377674 - 377750 87.2 # Arg ACG 0 0 + TRNA 377949 - 378025 87.2 # Arg ACG 0 0 356 180 Tu 1 . + CDS 378306 - 378872 542 ## COG0637 Predicted phosphatase/phosphohexomutase + Prom 378875 - 378934 3.6 357 181 Op 1 5/0.179 + CDS 379013 - 379297 261 ## COG1238 Predicted membrane protein 358 181 Op 2 6/0.090 + CDS 379370 - 380926 1798 ## COG2918 Gamma-glutamylcysteine synthetase + Term 380940 - 380971 2.5 + Prom 380962 - 381021 2.5 359 182 Tu 1 . + CDS 381076 - 381591 582 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis + Term 381625 - 381656 3.4 - Term 381613 - 381644 3.4 360 183 Op 1 19/0.000 - CDS 381655 - 383193 1618 ## COG0477 Permeases of the major facilitator superfamily 361 183 Op 2 7/0.060 - CDS 383210 - 384382 1218 ## COG1566 Multidrug resistance efflux pump - Term 384426 - 384461 5.0 362 184 Op 1 . - CDS 384509 - 385039 548 ## COG1846 Transcriptional regulators - Prom 385063 - 385122 5.2 363 184 Op 2 . - CDS 385130 - 385465 368 ## B21_02503 hypothetical protein 364 184 Op 3 4/0.373 - CDS 385455 - 386192 565 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) - Prom 386212 - 386271 8.4 365 185 Tu 1 . - CDS 386316 - 387500 1191 ## COG0477 Permeases of the major facilitator superfamily - Prom 387532 - 387591 4.5 - Term 387640 - 387681 3.3 366 186 Op 1 14/0.000 - CDS 387791 - 388783 1128 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components 367 186 Op 2 16/0.000 - CDS 388840 - 389904 1267 ## COG4176 ABC-type proline/glycine betaine transport system, permease component 368 186 Op 3 5/0.179 - CDS 389897 - 391099 1223 ## COG4175 ABC-type proline/glycine betaine transport system, ATPase component - Prom 391128 - 391187 5.4 - Term 391303 - 391339 2.4 369 187 Op 1 24/0.000 - CDS 391454 - 392413 987 ## COG0208 Ribonucleotide reductase, beta subunit 370 187 Op 2 18/0.000 - CDS 392423 - 394528 2057 ## COG0209 Ribonucleotide reductase, alpha subunit 371 187 Op 3 11/0.000 - CDS 394540 - 394950 250 ## COG1780 Protein involved in ribonucleotide reduction 372 187 Op 4 . - CDS 394947 - 395192 291 ## COG0695 Glutaredoxin and related proteins - Prom 395375 - 395434 3.9 - Term 395374 - 395410 5.6 373 188 Tu 1 . - CDS 395440 - 395769 256 ## COG4575 Uncharacterized conserved protein - Prom 395795 - 395854 2.4 + Prom 395774 - 395833 3.4 374 189 Tu 1 . + CDS 395921 - 396265 361 ## G2583_3317 hypothetical protein - Term 396257 - 396291 8.3 375 190 Tu 1 . - CDS 396302 - 396751 412 ## ECSP_3616 predicted inner membrane protein - Prom 396866 - 396925 6.2 + Prom 397212 - 397271 5.8 376 191 Tu 1 . + CDS 397419 - 397823 487 ## COG2916 DNA-binding protein H-NS - Term 397700 - 397733 1.0 377 192 Op 1 7/0.060 - CDS 397870 - 398394 346 ## COG0607 Rhodanese-related sulfurtransferase 378 192 Op 2 . - CDS 398404 - 398703 324 ## COG0640 Predicted transcriptional regulators - Prom 398727 - 398786 5.3 + Prom 398770 - 398829 4.8 379 193 Op 1 4/0.373 + CDS 398886 - 399044 234 ## COG0401 Uncharacterized homolog of Blt101 + Term 399060 - 399091 3.9 + Prom 399046 - 399105 2.0 380 193 Op 2 . + CDS 399128 - 399577 526 ## COG1652 Uncharacterized protein containing LysM domain - Term 399516 - 399549 5.1 381 194 Op 1 1/0.940 - CDS 399578 - 400240 810 ## COG1802 Transcriptional regulators 382 194 Op 2 4/0.373 - CDS 400261 - 401661 1515 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 401743 - 401802 3.7 - Term 401747 - 401788 3.2 383 195 Op 1 12/0.000 - CDS 401975 - 403255 1392 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases 384 195 Op 2 3/0.552 - CDS 403269 - 404717 1859 ## COG1012 NAD-dependent aldehyde dehydrogenases 385 195 Op 3 . - CDS 404740 - 406008 1100 ## COG0579 Predicted dehydrogenase 386 195 Op 4 . - CDS 406028 - 407005 1059 ## ECSE_2912 hypothetical protein - Prom 407227 - 407286 4.8 - Term 407290 - 407330 8.5 387 196 Tu 1 . - CDS 407341 - 407505 59 ## COG0366 Glycosidases - Prom 407566 - 407625 5.8 388 197 Tu 1 . - CDS 407948 - 409594 501 ## COG0366 Glycosidases + TRNA 410154 - 410229 87.6 # Met CAT 0 0 - Term 410229 - 410266 5.5 389 198 Tu 1 . - CDS 410328 - 411173 472 ## ECH74115_1409 hypothetical protein - Term 411192 - 411230 6.7 390 199 Op 1 . - CDS 411270 - 411467 125 ## EC55989_4897 hypothetical protein 391 199 Op 2 . - CDS 411479 - 411967 325 ## ECH74115_5037 hypothetical protein 392 199 Op 3 . - CDS 411958 - 412341 256 ## EcE24377A_3353 hypothetical protein 393 199 Op 4 . - CDS 412431 - 412799 149 ## ECB_02807 antitoxin of the YeeV-YeeU toxin-antitoxin system 394 199 Op 5 . - CDS 412879 - 413100 311 ## ECS88_3313 conserved hypothetical protein; CP4-44 prophage 395 199 Op 6 . - CDS 413169 - 413645 465 ## COG2003 DNA repair proteins 396 199 Op 7 . - CDS 413661 - 414053 286 ## ECS88_4894 conserved hypothetical protein; putative antirestriction protein Predicted protein(s) >gi|299856449|gb|ADWV01000002.1| GENE 1 337 - 1221 980 294 aa, chain - ## HITS:1 COG:ECs3887 KEGG:ns NR:ns ## COG: ECs3887 COG1028 # Protein_GI_number: 15833141 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 294 1 294 294 555 99.0 1e-158 MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSG IGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVH EAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGAS IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG GQTQDKIPQFGQKTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG >gi|299856449|gb|ADWV01000002.1| GENE 2 1412 - 1906 610 164 aa, chain + ## HITS:1 COG:ECs3886 KEGG:ns NR:ns ## COG: ECs3886 COG2862 # Protein_GI_number: 15833140 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 271 100.0 5e-73 MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPNIFSMAESDLILVLLSL VDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDATSLKNKVAASIVAISSIH LLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLTRHNH >gi|299856449|gb|ADWV01000002.1| GENE 3 1946 - 2986 1026 346 aa, chain - ## HITS:1 COG:ECs3885 KEGG:ns NR:ns ## COG: ECs3885 COG0667 # Protein_GI_number: 15833139 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 346 1 346 346 690 99.0 0 MVWLANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHF DLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASL DQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVE LLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQ DSRMYREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDERVTSVLI GASRAEQLEENVQALNNLTFSTEELAQIDQHIADGELNLWQASSDK >gi|299856449|gb|ADWV01000002.1| GENE 4 3143 - 4030 952 295 aa, chain + ## HITS:1 COG:Z4353 KEGG:ns NR:ns ## COG: Z4353 COG0412 # Protein_GI_number: 15803544 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Escherichia coli O157:H7 EDL933 # 1 295 14 308 308 580 98.0 1e-165 MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTALALFDLLKPNYALATQ VEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARR VAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTKLMNDFFAAIEFMQRYPQAAGKV GITGFCYGGGVSNAAAVAYPELACAVPFYGRQAPTADVANIEAPLLLHFAELDTRINEGW PAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS >gi|299856449|gb|ADWV01000002.1| GENE 5 4149 - 4436 307 95 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3148 NR:ns ## KEGG: ECIAI1_3148 # Name: yghW # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 95 1 95 95 184 100.0 8e-46 MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMYEKTGDRQLSAWEAGIL TRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN >gi|299856449|gb|ADWV01000002.1| GENE 6 4625 - 5743 1171 372 aa, chain + ## HITS:1 COG:ECs3882 KEGG:ns NR:ns ## COG: ECs3882 COG1740 # Protein_GI_number: 15833136 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I small subunit # Organism: Escherichia coli O157:H7 # 1 372 1 372 372 703 100.0 0 MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVTNPQRPPVIWIGAQECT GCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENKHNALEKYKGQYVLVVDGS IPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAWGGVAAAGVNPTGAVSLQEVL PGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKNRPTFAYGRLIHEHCERRPHFDA GRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQFCDVGGVWPVAIGHPCYGCNEEGI GFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSAGAIGLLGGVVGLVAGVSVMAVRELGR QQKKDNADSRGE >gi|299856449|gb|ADWV01000002.1| GENE 7 5746 - 6732 1025 328 aa, chain + ## HITS:1 COG:ECs3881 KEGG:ns NR:ns ## COG: ECs3881 COG0437 # Protein_GI_number: 15833135 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 328 1 328 328 674 100.0 0 MNRRNFIKAASCGALLTGALPSVSHAAAENRPPIPGSLGMLYDSTLCVGCQACVTKCQDI NFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEENGYAYIKKQCMHCVDPNC VSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYDYNNPFGALHKCELCNQK GVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRLALKPGSEYHYPRQTLKSGDTYL HTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPKLDDLSTGARSENIQHTLYKGMMLP LAVLAGLTVLVRRNTKNDHHDGGDDHES >gi|299856449|gb|ADWV01000002.1| GENE 8 6722 - 7900 1594 392 aa, chain + ## HITS:1 COG:hybB KEGG:ns NR:ns ## COG: hybB COG5557 # Protein_GI_number: 16130895 # Func_class: C Energy production and conversion # Function: Polysulphide reductase # Organism: Escherichia coli K12 # 1 392 1 392 392 717 99.0 0 MSHDPKPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSDLNGGFPWGVWIAFDLL IGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLGGLSITIDVGRYWNLPYFY IPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWKVSLQRLNKVMFFIIALGALL PTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAFIMGFSIVIFEGSLVQAGLRGNG PDEKSLFVKLTNTISVLLAIFIVLRFGELIYRDKLSLAFAGDFYSVMFWIEVLLMLFPLV VLRVAKLRNDSRMLFLSALSALLGCATWRLTYSLVAFNPGGGYAYFPTWEELLISIGFVA IEICAYIVLIRLLPILPPLKQNDHNRHEASKA >gi|299856449|gb|ADWV01000002.1| GENE 9 7897 - 9600 1921 567 aa, chain + ## HITS:1 COG:ECs3879 KEGG:ns NR:ns ## COG: ECs3879 COG0374 # Protein_GI_number: 15833133 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I large subunit # Organism: Escherichia coli O157:H7 # 1 567 1 567 567 1185 100.0 0 MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEIVKNRDPRDAWMIVQRI CGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIVHFYQLSALDWVDIT SALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVASGQLGIFANGYWGHPAMKLP PEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNLAVGGVANPINLDGLGVLNLERL MYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRGKGAVNYLSVPEFPTDSKNGSFLFP GGYIENADLSSYRPITSHSDEYLIKGIQESAKHSWYKDEAPQAPWEGTTIPAYDGWSDDG KYSWVKSPTFYGKTVEVGPLANMLVKLAAGRESTQNKLNEIVAIYQKLTGNTLEVAQLHS TLGRIIGRTVHCCELQDILQNQYSALITNIGKGDHTTFVKPNIPATGEFKGVGFLEAPRG MLSHWMVIKDGIISNYQAVVPSTWNSGPRNFNDDVGPYEQSLVGTPVADPNKPLEVVRTI HSFDPCMACAVHVVDADGNEVVSVKVL >gi|299856449|gb|ADWV01000002.1| GENE 10 9600 - 10094 561 164 aa, chain + ## HITS:1 COG:ECs3878 KEGG:ns NR:ns ## COG: ECs3878 COG0680 # Protein_GI_number: 15833132 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 289 100.0 2e-78 MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAGMELLGDMANRDHLII ADAIVSKKSAPGTMMILRDEEVPALFTNKISPHQLGLADVLSALRFTGEFPKKLTLVGVI PESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPREAIHD >gi|299856449|gb|ADWV01000002.1| GENE 11 10087 - 10575 554 162 aa, chain + ## HITS:1 COG:no KEGG:SSON_3137 NR:ns ## KEGG: SSON_3137 # Name: hybE # Def: hydrogenase 2-specific chaperone # Organism: S.sonnei # Pathway: not_defined # 1 162 1 162 162 327 100.0 7e-89 MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSDFTLFEGQWTGCVITPW MLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGVSQYLSCSLMSPLSHSMSI EEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGENA >gi|299856449|gb|ADWV01000002.1| GENE 12 10568 - 10909 308 113 aa, chain + ## HITS:1 COG:hybF KEGG:ns NR:ns ## COG: hybF COG0375 # Protein_GI_number: 16130891 # Func_class: R General function prediction only # Function: Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) # Organism: Escherichia coli K12 # 1 113 1 113 113 199 99.0 1e-51 MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAVRFSFEIVCHGTVAQGC DLHIVYKPAQAWCWDCSQVVEIHQHDAQCPICHGERLRVDTGDSLIVKSIEVE >gi|299856449|gb|ADWV01000002.1| GENE 13 10922 - 11170 381 82 aa, chain + ## HITS:1 COG:ECs3875 KEGG:ns NR:ns ## COG: ECs3875 COG0298 # Protein_GI_number: 15833129 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 82 1 82 82 152 100.0 1e-37 MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADLLGQWVLVHVGFAMSII DEDEAKATLDALRQMDYDITSA >gi|299856449|gb|ADWV01000002.1| GENE 14 11293 - 12159 1059 288 aa, chain - ## HITS:1 COG:ECs3874 KEGG:ns NR:ns ## COG: ECs3874 COG0625 # Protein_GI_number: 15833128 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 288 17 304 304 598 98.0 1e-171 MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHPLQLYSLGTPNGQKVTI MLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIPALRDHTHNPPIRVFESGS ILLYLAEKFGYFLPQDLAKHTETMNWLFWLQGAAPFLGGGFGHFYHYAPMKIEYAINRFT MEAKRLLDVLDKQLAQHKFIAGDEYTIADMAIWPWFGNVVLGGVYDAAEFLDAGSYKHVQ RWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDASDFETNTEDKRQG >gi|299856449|gb|ADWV01000002.1| GENE 15 12364 - 14223 2159 619 aa, chain + ## HITS:1 COG:gsp_2 KEGG:ns NR:ns ## COG: gsp_2 COG0754 # Protein_GI_number: 16130888 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Escherichia coli K12 # 233 619 1 387 387 823 99.0 0 MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVFRSYIDDEYMGHKWQCV EFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQAFPNGSPRAPVAGALLIW DKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQWTRELEMVVENGCYTLKDTF DDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLENKGQFDGKWLDEKDPLQNAYVQA NGQVINQDPYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPR LRLSWQRRRHHMITGRMDFCMDERGLKVYEYNADSASCHTEAGLILERWAEQGYKGNGFN PAEGLINELAGAWKHSRARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILRGLDELG WDAAGQLIDGEGRLVNCVWKTWAWETAFDQIREVSDREFAAVPIRTGHPQNEVRLIDVLL RPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIAGRCG SNIDLVSHHEEVLDKTSGKFAEQKNIYQQLWCLPKADGKYIQVCTFTVGGNYGGTCLRGD ESLVIKKESDIEPLIVVKK >gi|299856449|gb|ADWV01000002.1| GENE 16 14315 - 14578 98 87 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_3273 NR:ns ## KEGG: EcSMS35_3273 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 42 87 1 46 46 75 93.0 8e-13 MPEQAITKALCIYQGQQINLAYIRLRHFEFTNGRIISDFNGMGKVKYHFLTIKRVLFLVY QTISIHSKPLEIIKTQVFHWLIYSHMK >gi|299856449|gb|ADWV01000002.1| GENE 17 14515 - 16014 1461 499 aa, chain + ## HITS:1 COG:pitB KEGG:ns NR:ns ## COG: pitB COG0306 # Protein_GI_number: 16130887 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Escherichia coli K12 # 1 499 1 499 499 891 99.0 0 MLNLFVGLDIYTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMQPQLAVVMAAFF NFFGVLLGGLSVAYAIVHMLPTDLLLNMGSTHGLAMVFSMLLAAIIWNLGTWFFGLPASS SHTLIGAIIGIGLTNALLTGSSVMDALNLREVTKIFSSLIVSPIVGLVIAGGLIFLLRRY WSGTKKRDRIHRIPEDRKKKKGKRKPPFWTRIALIVSAAGVAFSHGANDGQKGIGLVMLV LVGIAPAGFVVNMNASGYEITRTRDAVTNFEHYLQQHPELPQKLIAMEPPLPAASTDGTQ VTEFHCHPANTFDAIARVKTMLPGNMESYEPLSVSQRSQLRRIMLCISDTSAKLAKLPGV SKEDQNLLKKLRSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVAMTIGEKIGKRGMTY AQGMAAQMTAAVSIGLASYIGMPVSTTHVLSSAVAGTMVVDGGGLQRKTVTSILMAWVFT LPAAIFLSGGLYWIALQLI >gi|299856449|gb|ADWV01000002.1| GENE 18 16063 - 16755 562 230 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_3135 NR:ns ## KEGG: ECIAI1_3135 # Name: yghT # Def: conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain # Organism: E.coli_IAI1 # Pathway: not_defined # 1 230 1 230 230 461 100.0 1e-129 MQSITPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGK SLHKTIERNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQI PGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKLNVDLEVACARKPDHKR ESLARKIAITPQLTFGGAQLVDIDANRPLEQVLVDAEKAITDFMTARGYH >gi|299856449|gb|ADWV01000002.1| GENE 19 16944 - 17642 355 232 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3134 NR:ns ## KEGG: ECIAI1_3134 # Name: yghS # Def: conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain # Organism: E.coli_IAI1 # Pathway: not_defined # 1 232 6 237 237 468 100.0 1e-131 MSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPTERIYLGQSSGRIGEWISQLPV IGAPFGRYLRSKAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKSQQGFLLITDR YPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFA RKPDHQLAALQEKIAVTPQLTFNGAKILELDGRQPADEIMQASLRAIHAALS >gi|299856449|gb|ADWV01000002.1| GENE 20 17674 - 18432 688 252 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3668 NR:ns ## KEGG: ECO103_3668 # Name: yghR # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 252 1 252 252 486 100.0 1e-136 MDALQTQTVNSTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLS GEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQR LAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMFLAQRERRLYQQMAQYRPELI IRLGIDIETAISRKPDHDYAELQDKIGVMSTIGYNGTKILEIDSRAPYSEVLEQAQKAVS LVAIVSDRRSLT >gi|299856449|gb|ADWV01000002.1| GENE 21 18628 - 19827 884 399 aa, chain + ## HITS:1 COG:yghQ KEGG:ns NR:ns ## COG: yghQ COG2244 # Protein_GI_number: 16130883 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 1 305 21 325 325 572 99.0 1e-163 MFGVLVIVQSYAKSISDFIKFQTWQLVVQYGTPALTNNNPQQFRNVVSFSFSLDIVSGAV AIVGGIALLPFLSHSLGLDDQSFWLAALYCTLIPSMASSTPTGILRAVDRFDLIAVQQAT KPFLRAAGSVVAWYFDFGFAGFVIAWYVSNLVGGTMYWWFAARELRRRNIHNAFKLNLFE SARHIKGAWSFVWSTNIAHSIWSARNSCSTVLVGIVLGPAAAGLFKIAMTFFDAAGTPAG LLGKSFYPEVMRLDPRTTRPWLLGVKSGLLAGGIGILVALAVLIVGKPLISLVFGVKYLE AYDLIQVMLGAIVISMLGFPQESLLLMAGKQRAFLVAQTIASIGYIVLLFMFCHLFGVLG AAFAYFGGQCLDVALSLIPTLKAFFQRHSLLYNAAGEKS >gi|299856449|gb|ADWV01000002.1| GENE 22 19827 - 20651 616 274 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3131 NR:ns ## KEGG: ECIAI1_3131 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 274 1 274 274 535 100.0 1e-151 MMRKYFPLEASERLFVAIEEDDVVDAQVSLPPTIALSCTTEIIHDNYALCLQFWLNGVNR QELLRLVRKQAKGDELTADERKQFKYMRARYKHLRFAQRLYLKKHQAGFLFGKTTVFLGR FQDGFRNGKKNIVSYYGNLLRIYLSSPVWSLVNYSLRHSQLESVSSFIAYRQKQMHTLKE IIAKPRLTGREFHDVRKIISQQVSYYDTLRSLDPENKEALQISRFLAAINGLMGDKHDDM VADDMENRQSYDAPLALDSDIRQRLELLISRFPL >gi|299856449|gb|ADWV01000002.1| GENE 23 20663 - 21223 481 186 aa, chain + ## HITS:1 COG:ytfJ KEGG:ns NR:ns ## COG: ytfJ COG3054 # Protein_GI_number: 16132038 # Func_class: R General function prediction only # Function: Predicted transcriptional regulator # Organism: Escherichia coli K12 # 1 184 1 183 184 206 54.0 2e-53 MSSRLIIALIIMLLAPGVQAHNFVTGKTVTPVYIQEGGELLLNSDDEIHYQKWNSTQLAG KVRIIQYIAGRKSAKKKNSLLIKAVEAANFPQDRFQPTTIVNTDDAIFGTGYFVVGKIEK NKRRYPWAQFIIDGNGQGRVAWRLPEQSSTILVLNKAGQIQWAKDGSLTPEEVDHVIALA QKLINE >gi|299856449|gb|ADWV01000002.1| GENE 24 21254 - 22324 981 356 aa, chain + ## HITS:1 COG:PA3828 KEGG:ns NR:ns ## COG: PA3828 COG0795 # Protein_GI_number: 15599023 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pseudomonas aeruginosa # 3 343 2 351 372 125 29.0 2e-28 MKLVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIA LEMLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMY GRPWAYTQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMILSQTVDQDNNRLTDALIYTST ANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLNPLDQSP NVKRKAKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPRQGRFSTLLPL TLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVPGLMLMGLLMLVARDFSLLQKFSR >gi|299856449|gb|ADWV01000002.1| GENE 25 22321 - 23400 911 359 aa, chain + ## HITS:1 COG:VC2499 KEGG:ns NR:ns ## COG: VC2499 COG0795 # Protein_GI_number: 15642495 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Vibrio cholerae # 33 352 34 352 356 147 30.0 4e-35 MNVFSRYLIRHLFLGFAAAAGLLLPLFTTFNLINELDDVSPGGYRWTQAVLVVLMTLPRT LVELSPFIALLGGIVGLGQLSKNSELTAIRSTGFSIFRIALVALVAGILWTVSLGAIDEW VASPLQQQALQIKSTATALGEDDDITGNMLWARRGNEFVTVKSLNEQGQPVGVEIFHYRD DLSLESYIYARSATIKDDKTWILHGVNHKKWLNGKETLETSDNLAWQSAFTSMDLDELSM PGNTFSVRQLNHYIHYLQETGQPSSEYRLALWEKLGQPILTLAMILLAVPFTFSAPRSPG MGSRLAVGVIVGLLTWISYQIMVNLGLLFALSAPVTALGLPVAFVLVALSLVYWYDRQH >gi|299856449|gb|ADWV01000002.1| GENE 26 23436 - 24608 1295 390 aa, chain - ## HITS:1 COG:CC1162 KEGG:ns NR:ns ## COG: CC1162 COG0156 # Protein_GI_number: 16125414 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Caulobacter vibrioides # 1 388 1 389 404 402 53.0 1e-112 MGLYDKYARLAGERLQFSDNGLTPFGTCIDEVYSATEGRIGNKKVILAGTNNYLGLTFNH DAISEGQAALAAQGTGTTGSRMANGSYAPHLALEKEIAEFFNRPTAIVFSTGYTANLGVI SALADHNAVVLLDADSHASIYDACSLGGAEIIRFRHNDAKDLERRMVRLGERAKEAIIIV EGIYSMLGDVAPLAEIVDIKRRLGGYLIVDEAHSFGVLGATGRGLAEAVGVEDDVDIIVG TFSKSLASIGGFAVGSEAMEVLRYGSRPYIFTASPSPSCIATVRSSLRTIATQPELRQKL MDNANHLYDGLQKLGYELSSHISPVVPVIIGSKEEGLRIWRELISLGVYVNLILPPAAPA GITLLRCSVNAAHSREQIDAIIQAFATLKQ >gi|299856449|gb|ADWV01000002.1| GENE 27 24608 - 24856 285 82 aa, chain - ## HITS:1 COG:no KEGG:S3224 NR:ns ## KEGG: S3224 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 82 1 82 82 124 100.0 1e-27 MVNREIVMDYILSCLQDLVENGVEIKPDSDLVNDLGLESIKVMDLLMMLEDRFDISIPIN ILLDVKTPAQLMETLLPWLENK >gi|299856449|gb|ADWV01000002.1| GENE 28 24888 - 25802 800 304 aa, chain - ## HITS:1 COG:CC1164 KEGG:ns NR:ns ## COG: CC1164 COG0702 # Protein_GI_number: 16125416 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Caulobacter vibrioides # 5 287 9 288 317 117 33.0 4e-26 MNQTVAVTGATGFIGKYIIDNLLARGFHVRALTRTARAHVNDNLTWVRGSLEDTHSLSEL VAGASAVVHCAGQVRGHKEEIFTHCNVDGSLRLMQAAKESGFCQRFLFISSLAARHPELS WYANSKHVAEQRLTAMADEITLGVFRPTAVYGPGDKELKPLFDWMLRGLLPRLGAPDTQL SFLHVTDFAQAVGQWLSAETVQTQTYELCDGVPGGYDWQHVRQLAADARCGSVRMVGIPL PVLTCLADISTALSRLAGKEPMLTRSKIRELTHADWSASNNRISEDINWFPGISLEQALR NGLF >gi|299856449|gb|ADWV01000002.1| GENE 29 25799 - 27487 1176 562 aa, chain - ## HITS:1 COG:CC1165 KEGG:ns NR:ns ## COG: CC1165 COG0318 # Protein_GI_number: 16125417 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Caulobacter vibrioides # 1 547 11 560 567 446 43.0 1e-125 MRYADFPTLVDALDYAALSSAGMNFYDRRCQLEDQLEYQTLKTRAEAGAKRLLSLNLKKG ERVALIAETSSGFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIIT GDEWLPLVNAATHNNPELHVLSHAWFKALPEADVALQRPVPNDIAYLQYTSGSTRFPRGV IITHREVMANLRAISHDGIKLRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLRTQD FAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKDLAELDLSCWRVAGIGAEPISAE QLHQFAECFRQVNFDDKTFMPCYGLAENALAVSFSDEGSGVVVNEVDRDILEYQGKAVAP GAETRAVSTFVNCGKALPEHGIEIRNEAGMPVAERVVGHICISGPSLMSGYFGDQASQDE IAATGWLDTGDLGYLLDGYLYVTGRIKDLIIIRGRNIWPQDIEYIAEQEPEIHSGDAIAF VTAQEKIILQIQCRISDEERRGQLIHALAARIQSEFGVTAAIDLLPPHSIPRTSSGKPAR AEAKKRYQKAYAASLHVQESLA >gi|299856449|gb|ADWV01000002.1| GENE 30 27891 - 29033 991 380 aa, chain + ## HITS:1 COG:no KEGG:c3711 NR:ns ## KEGG: c3711 # Name: yghO # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 380 23 402 402 798 99.0 0 MECDLLMIKIEKVINKNDLKAFIAFPSSLYPDDPNWIPPLFIERNEHLSAKNPGTDHIIW QAWVAKKAGQIVGRITAQIDTLHRERYGEDTGHFGMIDAIDDPQVFAALFGAAEAWLKSQ GASKISGPFSLNINQESGLLIEGFDTPPCAMMPHGKPWYAAHIEQLGYHKGIDLLAWWMQ RTDLTFSPALKKLMDQVRKKVTIRCINRQRFAEEMQILREIFNSGWQHNWGFVPFTEHEF ATMGDQLKYLVPDDMIYIAEIDSAPCAFIVGLPNINEAIADLNGSLFPFGWAKLLWRLKV SGVRTARVPLMGVRDEYQFSRIGPVIALLLIEALRDPFARRKIDALEMSWILETNTGMNN MLERIGAEPYKRYRLYEKQI >gi|299856449|gb|ADWV01000002.1| GENE 31 29040 - 29804 597 254 aa, chain - ## HITS:1 COG:glcC KEGG:ns NR:ns ## COG: glcC COG2186 # Protein_GI_number: 16130880 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 254 1 254 254 472 100.0 1e-133 MKDERRPICEVVAESIERLIIDGVLKVGQPLPSERRLCEKLGFSRSALREGLTVLRGRGI IETAQGRDSRVARLNRVQDTSPLIHLFSTQPRTLYDLLDVRALLEGESARLAATLGTQAD FVVITRCYEKMLAASENNKEISLIEHAQLDHAFHLAICQASHNQVLVFTLQSLTDLMFNS VFASVNNLYHRPQQKKQIDRQHARIYNAVLQRLPHVAQRAARDHVRTVKKNLHDIELEGH HLIRSAVPLEMNLS >gi|299856449|gb|ADWV01000002.1| GENE 32 30055 - 31554 1602 499 aa, chain + ## HITS:1 COG:glcD KEGG:ns NR:ns ## COG: glcD COG0277 # Protein_GI_number: 16130879 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli K12 # 1 499 1 499 499 1002 100.0 0 MSILYEERLDGALPDVDRTSVLMALREHVPGLEILHTDEEIIPYECDGLSAYRTRPLLVV LPKQMEQVTAILAVCHRLRVPVVTRGAGTGLSGGALPLEKGVLLVMARFKEILDINPVGR RARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLL KIEVQTLDGEALTLGSDALDSPGFDLLALFTGSEGMLGVTTEVTVKLLPKPPVARVLLAS FDSVEKAGLAVGDIIANGIIPGGLEMMDNLSIRAAEDFIHAGYPVDAEAILLCELDGVES DVQEDCERVNDILLKAGATDVRLAQDEAERVRFWAGRKNAFPAVGRISPDYYCMDGTIPR RALPGVLEGIARLSQQYDLRVANVFHAGDGNMHPLILFDANEPGEFARAEELGGKILELC VEVGGSISGEHGIGREKINQMCAQFNSDEITTFHAVKAAFDPDGLLNPGKNIPTLHRCAE FGAMHVHHGHLPFPELERF >gi|299856449|gb|ADWV01000002.1| GENE 33 31554 - 32606 1031 350 aa, chain + ## HITS:1 COG:glcF_1 KEGG:ns NR:ns ## COG: glcF_1 COG0277 # Protein_GI_number: 16130878 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli K12 # 1 318 1 318 369 634 98.0 0 MLRECDYSQALLEQVNQAISDKTPLVIQGSNSKAFLGRPVTGQTLDVRCHRGIVNYDPTE LVITARAGTPLVAIEAALESAGQMLPCEPPHYGEEATWGGMVACGLAGPRRPWSGSVRDF VLGTRIITGAGKHLRFGGEVMKNVAGYDLSRLMAGSYGCLGVLTEISMKVLPRPRASLSL RREISLQEAMNEIAQWQLQPLPISGLCYFDNALWIRLEGGEGSVKAARELLGGEEVAGQF WQQLREQQLPFFSLPGTLWRISLPSDAPMMDLPGEQLIDWGGALRWLKSTAEDNQIHRIA RNAGGHATRFSAGDGGFAPLSAPLFRYHQQLKQQLDPCGVFNPGRMYAEL >gi|299856449|gb|ADWV01000002.1| GENE 34 32617 - 33840 1158 407 aa, chain + ## HITS:1 COG:glcF_2 KEGG:ns NR:ns ## COG: glcF_2 COG0247 # Protein_GI_number: 16130878 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli K12 # 16 407 1 392 392 771 98.0 0 MQTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE GNEVTLKTQEHLDRCLTCRNCETTCPSGVRYHNLLDIGRDIVEQKVKRPLPERMLREGLR QVVPRPAVFRALTLVGLVLRPFLPEQVRAKLPAETVKAKPRPPLRHKRRVLMLEGCAQPT LSPNTNAATARVLDRLGISVMSANEAGCCGAVDYHLNAQEKGLARARNNIDAWWPAIEAG AEAILQTASGCGAFVKEYGQMLKNDALYADKARQVSELAVDLVELLREEPLEKLAVRGDK KLAFHCPCTLQHAQKLNGEVEKVLLRLGFTLTDVPDSHLCCGSAGTYALTHPDLARQLRD NKMNALESGKPEMIVTANIGCQTHLASAGRTSVRHWIEIVEQALEKE >gi|299856449|gb|ADWV01000002.1| GENE 35 33845 - 34249 625 134 aa, chain + ## HITS:1 COG:glcG KEGG:ns NR:ns ## COG: glcG COG3193 # Protein_GI_number: 16130877 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol # Organism: Escherichia coli K12 # 1 118 1 118 134 198 100.0 2e-51 MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLALSRMDDCAPIAAYISQE KARTAALGRRETKGYEEMVNNGRTAFVTAPLLTSLEGGVPVVVDGQIIGAVGVSGLTGAQ DAQVAKAAAAVLAK >gi|299856449|gb|ADWV01000002.1| GENE 36 34271 - 36442 2580 723 aa, chain + ## HITS:1 COG:glcB KEGG:ns NR:ns ## COG: glcB COG2225 # Protein_GI_number: 16130876 # Func_class: C Energy production and conversion # Function: Malate synthase # Organism: Escherichia coli K12 # 1 723 1 723 723 1470 99.0 0 MSQTITQGRLRIDANFKRFVDEEVLPGTGLDAAAFWRNFDEIVHDLAPENRQLLAERDRI QAALDEWHRSNPGPVKDKAAYKSFLRELGYLVPQPERVTVETTGIDSEITSQAGPQLVVP AMNARYALNAANARWGSLYDALYGSDIIPQEGAMVSGYDPQRGEQVIAWVRRFLDESLPL ENGSYQDVVAFKVVDKQLRIQLKNGKETTLRTPAQFVGYRGDAAALTCILLKNNGLHIEL QIDANGRIGKDDPAHINDVIVEAAISTILDCEDSVAAVDAEDKILLYRNLLGLMQGTLQE KMEKNGRQIVRKLNDDRHYTAADGSEISLHGRSLLFIRNVGHLMTIPVIWDSEGNEIPEG ILDGVMTGAIALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTL KMGIMDEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDEMHSVMEAGPMLRKNQMKSTP WIKAYERNNVLSGLFCGLRGKAQIGKGMWAMPDLMADMYSQKGDQLRAGANTAWVPSPTA ATLHALHYHQTNVQSVQANIAQTEFNAEFEPLLDDLLTIPVAENANWSVEEIQQELDNNV QGILGYVVRWVEQGIGCSKVPDIHNVALMEDRATLRISSQHIANWLRHGILTKEQVQASL ENMAKVVDQQNADDPAYRPMAGNFANSCAFKAASDLIFLGVKQPNGYTEPLLHAWRLREK ESH >gi|299856449|gb|ADWV01000002.1| GENE 37 36798 - 38480 1700 560 aa, chain + ## HITS:1 COG:yghK KEGG:ns NR:ns ## COG: yghK COG1620 # Protein_GI_number: 16130875 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Escherichia coli K12 # 1 560 1 560 560 914 99.0 0 MVTWTQMYMPMGGLGLSALVALIPIIFFFVALAVLRLKGHVAGAITLILSILIAIFAFKM PIDMAFAAAGYGFIYGLWPIAWIIVAAVFLYKLTVASGQFDIIRSSVISITDDQRLQVLL IGFSFGALLEGAAGFGAPVAITGALLVGLGFKPLYAAGLCLIANTAPVAFGALGVPILVA GQVTGIDPFHIGAMAGRQLPFLSVLVPFWLVAMMDGWKGVKETWPAALVAGGSFAVTQFF TSNYIGPELPDITSALVSIVSLALFLKVWRPKNTETAISMGQSAGAMVVNKPSSGGPVPS EYSLGQIIRAWSPFLILTVLVTIWTMKPFKALFAPGGAFYSLVINFQIPHLHQQVLKAAP IVAQPTPMDAVFKFDPLSAGGTAIFIAAIISIFILGVGIKKGIGVFAETLISLKWPILSI GMVLAFAFVTNYSGMSTTLALVLAGTGVMFPFFSPFLGWLGVFLTGSDTSSNALFGSLQS TTAQQINVSDTLLVAANTSGGVTGKMISPQSIAVACAATGMVGRESELFRYTVKHSLIFA SVIGVITLLQAYVFTGMLVS >gi|299856449|gb|ADWV01000002.1| GENE 38 38966 - 39394 196 142 aa, chain + ## HITS:1 COG:no KEGG:E2348C_3253 NR:ns ## KEGG: E2348C_3253 # Name: yghJ # Def: predicted inner membrane lipoprotein # Organism: E.coli_0127 # Pathway: not_defined # 1 138 1 137 1524 156 94.0 2e-37 MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTP EPTPDPEPTPEPTPDPEPTPEPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTP GDKVTCVAGNNTTIATFDNWWR >gi|299856449|gb|ADWV01000002.1| GENE 39 39427 - 39648 92 73 aa, chain + ## HITS:1 COG:yghD KEGG:ns NR:ns ## COG: yghD COG3149 # Protein_GI_number: 16130868 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulM # Organism: Escherichia coli K12 # 1 55 89 143 178 101 90.0 3e-22 MAARKSATTTPAQVSRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLPSVGG LKTPCHIASARAM >gi|299856449|gb|ADWV01000002.1| GENE 40 40024 - 40173 107 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300815557|ref|ZP_07095781.1| ## NR: gi|300815557|ref|ZP_07095781.1| conserved hypothetical protein [Escherichia coli MS 107-1] # 1 49 1 49 49 66 100.0 5e-10 MTDTIKNRRKNKDGVKKAKYIFEDENREIKTWSRNGKMPLTLQKRLNEG >gi|299856449|gb|ADWV01000002.1| GENE 41 40649 - 41377 415 242 aa, chain + ## HITS:1 COG:STM0306 KEGG:ns NR:ns ## COG: STM0306 COG3637 # Protein_GI_number: 16763689 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Salmonella typhimurium LT2 # 1 242 1 239 239 152 40.0 4e-37 MKKIMAVSALAVAGMFSAQALADGNKTGFYVTGKAGTSVVSLSDQRFIDGEGVWADRYKG GDDHDTVFSGGIAAGYDFYPQFSIPVRTELEFYARGKADTKYNLYKDDWSHDDLKSEVSV NTLMLNAYYDFRNDSAFTPWVSAGIGYARIHQKTTGISTWDYGYGYSGRESLSHSDSADN FAWSLGAGVRYDVTPDIALDLSYRYIDAGDSSVSYKDEWGDKYKSEVDVKSHDIMLGVTY NF >gi|299856449|gb|ADWV01000002.1| GENE 42 41849 - 43036 612 395 aa, chain + ## HITS:1 COG:yjgX KEGG:ns NR:ns ## COG: yjgX COG2194 # Protein_GI_number: 16132096 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 98 245 1 148 148 259 90.0 8e-69 MIPVYHFLVSAAILVFMVIFWRTHHRGHRNWLALLLFVLCSVNSWPLRMVKGTVVGTTDT LREMQRYEQLSQHGADSWKILPGAPLYDTIVIVTGESVRRDYMSVYGYPGPTTPWLNTAP GLFIDGYTSAAASTVPSLSRTLIYDYEQNPDSGNNVVALAAKAGYSTWWISNQGKLGEHD TRISVIASDAEHTVFLKKGSFASRKTDDMLLLQETERALADKSSPKVIFLHMMGSHPNPC DRLHSWPNHYLEQYPRKVACYLASISKLDNFLGQLDGILRRHSRHFAMLYFSDHGVSVSD SANPVHHDGHVQGGYSVPLIITASDISSHQSVSRKISARHFAGIFQWLTGIRTENIPPFN PLTDEDNEPVMVFNGEKNVPADSLKPQPLILPDRR >gi|299856449|gb|ADWV01000002.1| GENE 43 43145 - 46660 1799 1171 aa, chain - ## HITS:1 COG:STM4489 KEGG:ns NR:ns ## COG: STM4489 COG1112 # Protein_GI_number: 16767733 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Salmonella typhimurium LT2 # 1 1171 1 1171 1171 2236 94.0 0 MDENALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDEAIVSKFFKGEKDD VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDNTAETDEEREERYAALQQEWRQYLDD SERLLKNVAGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKDCSSP EKVIELLHGQLAAKSEQLIRLNATWQTLSQVRAARELIANDIEQYLDNLNKLLSGQEQKV TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPET IERNIDGLLNSAEREQTTYRQQIDSAHEIILKEQQAVQEWQRLALDLGYEGDEELSFSQA DELADTQIRFPAFLLTTHYWEGRWLIDMANIDDLQEEKKKKGAKGVTARWQRRMKLTPCV VMTCYMLPGNMQISEYKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI GDTEQIPPIWSITPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGHEESNLMPAMGYLHID GKGELASSGSRYNLLEAETIAAWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQAL GKQGISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK DSFLVFGDMDLFEIQPPSSARGLLAKYLFESEKNALTFDYKERKDLKTSETKIYTLHGVE QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH KDYEKRKEKQENLKGTLEKLNAFGITTKLVNRVHSKIVIGDDSLLCVGSFNWFSATREAR YERYDTSMVYCGDNLKGEIEAIYNSLERRQV >gi|299856449|gb|ADWV01000002.1| GENE 44 47112 - 48374 374 420 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 49 401 60 402 406 148 28 3e-34 MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS LSEARTKRNEARKLISEGIDPCEQKRAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKV LKSLETHVFPFIGNRDITTLSTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGI IRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTQLAVMLNLLVFIRSS ELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTW AGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQDVCGHGFRAMACSALIESGLWSRD AVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANRDKGISPFEYAKINNPLK >gi|299856449|gb|ADWV01000002.1| GENE 45 48438 - 48659 66 73 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4689 NR:ns ## KEGG: EC55989_4689 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 73 10 82 82 131 95.0 9e-30 MRPVARIAQSVEQGIENPRVLGSIPSPGTKFISTDLHGGPFFVSERHNLSALPPNQFYRT QPDSPHINPIVWV >gi|299856449|gb|ADWV01000002.1| GENE 46 48753 - 49460 590 235 aa, chain - ## HITS:1 COG:ECs3842 KEGG:ns NR:ns ## COG: ECs3842 COG1811 # Protein_GI_number: 15833096 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 330 97.0 1e-90 MVIGPFINASAVLLGGVLGALLSQRLPERIRVSMTSIFGLASLGIGILLVVKCANLPAMV LATLLGALIGEICLLEKGVNTAVTEAQNLFRHSRKKPAHESFIQNYVAIIVLFCASGTGI FGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSIISIPLLIIQLTLAWAAALILP LTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLPALLLAMPLSAAWTAWFA >gi|299856449|gb|ADWV01000002.1| GENE 47 49858 - 51993 1743 711 aa, chain + ## HITS:1 COG:ECs3841 KEGG:ns NR:ns ## COG: ECs3841 COG1982 # Protein_GI_number: 15833095 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 711 21 731 731 1488 99.0 0 MKSMNIAASSDLVSRLSSHRRVVALGDTDFTDVAAVVITAADSRSGILALLKRTGFHLPV FLYSEHAVELPAGVTAVINGNEQQWLELESAACQYEENLLPPFYDTLTQYVEMGNSTFAC PGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGDLLIHEGSAKDAQKFAAKVFH ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEASRNP FGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPFRLAIIQLGTYDGTVYNARQVIDTVG HLCDYILFDSAWVGYEQFIPMMADSSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHK KDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVELG IESRKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGYAADQ YFVDPCKLLLTTPGINAETGEYSDFGVPATILAHYLRENGIVPEKCDLNSILFLLTPAES HEKLAQLVAMLAQFEQHIEDDSPLAEVLPSVYNKYPVRYRDYTLRQLCQEMHDLYVSFDV KDLQKAMFRQQSFPSVVMNPQDAHSAYIRGEVELVRIRDAEGRIAAEGALPYPPGVLCVV PGEVWGGAVQRYFLALEEGVNLLPGFSPELQGVYSETDADGMKRLYGYVLK >gi|299856449|gb|ADWV01000002.1| GENE 48 52043 - 53299 1468 418 aa, chain - ## HITS:1 COG:ECs3840 KEGG:ns NR:ns ## COG: ECs3840 COG0477 # Protein_GI_number: 15833094 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 418 17 434 434 725 100.0 0 MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPALLGI VADKWLSAKWVYAICHTIGAITLFMAAQVTTPEAMFLVILINSFAYMPTLGLINTISYYR LQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHMQLYIGAALSAILVLFTLTLP HIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSMLLGAELQITNMFGNTFLHSFDK DPMFASSFIVQHASIIMSISQISETLFILTIPFFLSRYGIKNVMMISIVAWILRFALFAY GDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVEKEVSPAIRASAQGMFLMMTNGFGCIL GGIVSGKVVEMYTQNGITDWQTVWLIFAGYSVVLAFAFMAMFKYKHVRVPTGTQTVSH >gi|299856449|gb|ADWV01000002.1| GENE 49 53501 - 54583 1052 360 aa, chain - ## HITS:1 COG:mltC KEGG:ns NR:ns ## COG: mltC COG0741 # Protein_GI_number: 16130864 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli K12 # 1 360 1 360 360 687 99.0 0 MMKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQFAHNIENIWGFKEVVI AGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLY SDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLKNRLQSRNNGLRIIYSVTIN MVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTESSFNPYAVSRSDALGLMQVVQH TAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAY NGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRRR >gi|299856449|gb|ADWV01000002.1| GENE 50 54645 - 54920 373 91 aa, chain - ## HITS:1 COG:STM3111 KEGG:ns NR:ns ## COG: STM3111 COG2924 # Protein_GI_number: 16766412 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: Fe-S cluster protector protein # Organism: Salmonella typhimurium LT2 # 1 91 1 91 91 161 94.0 3e-40 MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQHKQTMLINEKKLNMMNA EHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK >gi|299856449|gb|ADWV01000002.1| GENE 51 54948 - 56000 1089 350 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase [Haemophilus influenzae R2846] # 6 343 11 366 378 424 58 1e-117 MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFP TVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRS TAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERF NQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWSLYPGKKPKQTLPERTGYFLLLQH EDEVLLAQRPPSGLWGGLYCFPQFADEESLRHWLAQRQIAADNLTQLTAFRHTFSHFHLD IVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLAAPVERLLQQLRTGAPV >gi|299856449|gb|ADWV01000002.1| GENE 52 56161 - 56880 772 239 aa, chain + ## HITS:1 COG:yggH KEGG:ns NR:ns ## COG: yggH COG0220 # Protein_GI_number: 16130861 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Escherichia coli K12 # 1 239 1 239 239 491 100.0 1e-139 MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPVMGVEFSEDMLDFPALF GREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCH DAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD WEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMFERVK >gi|299856449|gb|ADWV01000002.1| GENE 53 56880 - 57206 463 108 aa, chain + ## HITS:1 COG:yggL KEGG:ns NR:ns ## COG: yggL COG3171 # Protein_GI_number: 16130860 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 108 11 118 118 202 100.0 1e-52 MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINEVIEPNKLAFDGS GYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSELFDVWWD >gi|299856449|gb|ADWV01000002.1| GENE 54 57393 - 58109 926 238 aa, chain + ## HITS:1 COG:no KEGG:ECO111_3709 NR:ns ## KEGG: ECO111_3709 # Name: yggN # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 238 2 239 239 429 100.0 1e-119 MRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGENGNLVITPDGNVMYNGK QYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIALDKIIVQEMGESSKMRSRLT KLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLVNQAMGGILQDSINEMGAKAVL KSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGKDVCSRVVTLEDSRKALVGNLK >gi|299856449|gb|ADWV01000002.1| GENE 55 58285 - 59331 1345 348 aa, chain + ## HITS:1 COG:ECs3833 KEGG:ns NR:ns ## COG: ECs3833 COG0252 # Protein_GI_number: 15833087 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 1 348 1 348 348 613 99.0 1e-175 MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATKSNYTAGKVGVENLVNA VPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYF LDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGR DVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVY NYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKNGTAVVRSSRVPTGAT TQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQTKDPQQIQQIFNQY >gi|299856449|gb|ADWV01000002.1| GENE 56 59448 - 60455 904 335 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3539 NR:ns ## KEGG: ECO103_3539 # Name: yggM # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 335 1 335 335 601 100.0 1e-170 MKKQWIVGTALLMLMTGNAWADGEPPTENILKDQFKKQYHGILKLDAITLKNLDAKGNQA TWSAEGDVSSSDDLYTWVGQLADYELLEQTWTKDKPVKFSAMLTSKGTPASGWSVNFYSF QAAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALNTQKNSIPALEKEVKALDKQM VAAQKAADAYWGKDANGKQMTREEAFKKIHQQRDEFNKQNDSEAFAVKYDKEVYQPAIAA CHKQSEECYEVPIQQKRDFDINEQRRQTFLQSQKLSRKLQDDWVTLEKGQYPLTMKVSEI NSKKVAILMKIDDINQANERWKKDTEQLRRNGVIK >gi|299856449|gb|ADWV01000002.1| GENE 57 60610 - 61746 1123 378 aa, chain - ## HITS:1 COG:yggW KEGG:ns NR:ns ## COG: yggW COG0635 # Protein_GI_number: 16130856 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Escherichia coli K12 # 1 378 1 378 378 795 99.0 0 MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVK TIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNR ISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEEALGDL RQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQYETSA YAKPSYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDGRILRTTKTRHPRGFMQGRYLESQR DVEAADKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECADYWQI TEHGKLFLNSLLELFLAE >gi|299856449|gb|ADWV01000002.1| GENE 58 61739 - 62332 1005 197 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157155704|ref|YP_001464307.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Escherichia coli E24377A] # 1 197 1 197 197 391 100 1e-107 MQKVVLATGNAGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKV TGLPAIADDSGLAVDVLGGAPGIYSARYSGEDATDLKNLQKLLETLKDVPDDQRQARFHC VLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIFFVPSEGKTAAELTREEKSAI SHRGQALKLLLDALRNG >gi|299856449|gb|ADWV01000002.1| GENE 59 62340 - 62630 313 96 aa, chain - ## HITS:1 COG:ECs3829 KEGG:ns NR:ns ## COG: ECs3829 COG1872 # Protein_GI_number: 15833083 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 96 5 100 100 174 98.0 5e-44 MSAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFR VAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN >gi|299856449|gb|ADWV01000002.1| GENE 60 62627 - 63193 767 188 aa, chain - ## HITS:1 COG:ECs3828 KEGG:ns NR:ns ## COG: ECs3828 COG0762 # Protein_GI_number: 15833082 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 272 100.0 2e-73 MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGP IDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWVS QGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVLLLYVINMGVAEVLQATGNML LPGLWMAL >gi|299856449|gb|ADWV01000002.1| GENE 61 63211 - 63915 702 234 aa, chain - ## HITS:1 COG:ECs3826 KEGG:ns NR:ns ## COG: ECs3826 COG0325 # Protein_GI_number: 15833081 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 456 100.0 1e-128 MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQ EGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHTIDRLRIATRLNDQRPAEL PPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRLRGLMAIPAPESEYVRQFEVA RQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK >gi|299856449|gb|ADWV01000002.1| GENE 62 63933 - 64913 800 326 aa, chain + ## HITS:1 COG:yggR KEGG:ns NR:ns ## COG: yggR COG2805 # Protein_GI_number: 16130851 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Escherichia coli K12 # 1 326 16 341 341 612 98.0 1e-175 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDAPDVEELLREWLDDDQRAIL LENGQLDFAVSLAENQRLRGSAFAQRQGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYIYASQRCLIQQREIGLHCM TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH VIQTGQQVGMLTFQQSYQQRVGEGRL >gi|299856449|gb|ADWV01000002.1| GENE 63 65089 - 65505 490 138 aa, chain - ## HITS:1 COG:ECs3825 KEGG:ns NR:ns ## COG: ECs3825 COG0816 # Protein_GI_number: 15833079 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Escherichia coli O157:H7 # 1 138 1 138 138 276 99.0 1e-74 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNLIERLLKEWQPDEIIVG LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK VDSASAVIILESYFEQGY >gi|299856449|gb|ADWV01000002.1| GENE 64 65505 - 66068 616 187 aa, chain - ## HITS:1 COG:ECs3824 KEGG:ns NR:ns ## COG: ECs3824 COG1678 # Protein_GI_number: 15833078 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 187 25 211 211 374 100.0 1e-104 MNLQHHFLIAMPALQDPIFRRSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPE PRDESIRLDKPVMLGGPLAEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQ PSDVLVALGYASWEKGQLEQEILDNAWLTAPADLNILFKTPIADRWREAAKLIGVDILTM PGVAGHA >gi|299856449|gb|ADWV01000002.1| GENE 65 66177 - 67127 347 316 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212636859|ref|YP_002313384.1| Glutathione synthase; Ribosomal protein S6 modification enzyme [Shewanella piezotolerans WP3] # 7 310 6 319 345 138 31 4e-31 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVK QNYEEWFSFVGEQDLPLADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIVNKPQSLR DCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILKPLDGMGGASIFRVKEGDPNL GVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEPVPYCLARIPQGGETRGNLAAGG RGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIGDRLTEINVTSPTCIREIEAEFPVS ITGMLMDAIEARLQQQ >gi|299856449|gb|ADWV01000002.1| GENE 66 67140 - 67871 552 243 aa, chain - ## HITS:1 COG:ECs3822 KEGG:ns NR:ns ## COG: ECs3822 COG1385 # Protein_GI_number: 15833076 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 243 10 252 252 485 99.0 1e-137 MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEITSASKK SVEVKVLEGKIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLD SERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWCAEQDEGLKLNLHPRASNSIN TLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFG DLG >gi|299856449|gb|ADWV01000002.1| GENE 67 67951 - 68658 529 235 aa, chain - ## HITS:1 COG:endA KEGG:ns NR:ns ## COG: endA COG2356 # Protein_GI_number: 16130846 # Func_class: L Replication, recombination and repair # Function: Endonuclease I # Organism: Escherichia coli K12 # 1 235 1 235 235 446 100.0 1e-125 MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPGTFYCGCKINWQGKKGV VDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGGRKNCAKDPVYRKMESDMH NLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEKAAEPPARARGAIARTYFYMR DQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKVQGNHNPYVQRACQARKS >gi|299856449|gb|ADWV01000002.1| GENE 68 68753 - 69208 418 151 aa, chain - ## HITS:1 COG:ECs3820 KEGG:ns NR:ns ## COG: ECs3820 COG3091 # Protein_GI_number: 15833074 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 151 15 165 165 289 99.0 2e-78 MRRLREKLAQANLKLGRNYPEPKLSYTQRGTSAGTAWLESYEIRLNPVLLLENSEAFIEE VVPHELAHLLVWKHFGRVAPHGKEWKWMMESVLGVPARRTHQFELQSVRRNTFPYRCKCQ EHQLTVRRHNRVVRGEAVYRCVHCGEQLVAK >gi|299856449|gb|ADWV01000002.1| GENE 69 69327 - 70721 1746 464 aa, chain - ## HITS:1 COG:galP KEGG:ns NR:ns ## COG: galP COG0477 # Protein_GI_number: 16130844 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 464 1 464 464 852 100.0 0 MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIADEFQITSHTQEWVVSS MMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVG VASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTGAWRWMLGVIIIP AILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESLQVKQSGWA LFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTN VLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQYFAIAMLLMFIV GFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTFWV YAALNVLFILLTLWLVPETKHVSLEHIERNLMKGRKLREIGAHD >gi|299856449|gb|ADWV01000002.1| GENE 70 71157 - 72311 1348 384 aa, chain - ## HITS:1 COG:ECs3818 KEGG:ns NR:ns ## COG: ECs3818 COG0192 # Protein_GI_number: 15833072 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Escherichia coli O157:H7 # 1 384 1 384 384 781 100.0 0 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTS AWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQ GLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVG IDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDC GLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVS YAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGH FGREHFPWEKTDKAQLLRDAAGLK >gi|299856449|gb|ADWV01000002.1| GENE 71 73106 - 75082 2366 658 aa, chain + ## HITS:1 COG:ECs3814 KEGG:ns NR:ns ## COG: ECs3814 COG1166 # Protein_GI_number: 15833068 # Func_class: E Amino acid transport and metabolism # Function: Arginine decarboxylase (spermidine biosynthesis) # Organism: Escherichia coli O157:H7 # 1 658 1 658 658 1363 100.0 0 MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWWGNNYYDVNELGHISVC PDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRSINAAFKRARESYGYNGDY FLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYI RLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPRLGVRARLASQGSGKWQSSGGEK SKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKL GVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNEYANNIIWAIGDACEENGLPHPTVITE SGRAVTAHHTVLVSNIIGVERNEYTVPTAPAEDAPRALQSMWETWQEMHEPGTRRSLREW LHDSQMDLHDIHIGYSSGTFSLQERAWAEQLYLSMCHEVQKQLDPQNRAHRPIIDELQER MADKMYVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDG DGIATTMPMPEYDPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELS DEGDTVADMLQYVQLDPKTLLTQFRDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE >gi|299856449|gb|ADWV01000002.1| GENE 72 75228 - 75959 571 243 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3230 NR:ns ## KEGG: EC55989_3230 # Name: not_defined # Def: conserved hypothetical protein; putative exported protein # Organism: E.coli_55989 # Pathway: not_defined # 1 243 1 243 243 464 100.0 1e-129 MKKWKVRSALVALIVLLAGCSSNAQYNSSASGNVGTAWGGDVHSTVQGVSAERAWRDPAE MIVISYSTNVPSGYDRVYSIRINELEYAIRDGNFNSLPITRVYDSSNNEPRYIVHARVGM NYQLYVRNYSRNTNYEIVATVDGLDVLNGKQGSLNNNGYIVNAGDSLAIKGFRKDKHTEA AFQFANVVDSYAANSAQGDVRNTGVIGFAAFELQGPAQNALPPCSGQAFPADNNGYAPPP CRK >gi|299856449|gb|ADWV01000002.1| GENE 73 76095 - 77015 1333 306 aa, chain + ## HITS:1 COG:ECs3812 KEGG:ns NR:ns ## COG: ECs3812 COG0010 # Protein_GI_number: 15833066 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 616 100.0 1e-176 MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDMATSGRAGGRHGPAAIR QVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMSEKLQAHAEKLLAAGKRML SFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCEFDHGTMFYTAPKEGLIDPNH SVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQIVGDMPVYLTFDIDCLDPAFAP GTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQ AAKKGE >gi|299856449|gb|ADWV01000002.1| GENE 74 77274 - 80072 2119 932 aa, chain + ## HITS:1 COG:STM3773_2 KEGG:ns NR:ns ## COG: STM3773_2 COG3933 # Protein_GI_number: 16767057 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Salmonella typhimurium LT2 # 461 932 1 472 472 870 92.0 0 MRRIDVIHKELERLTYGLELSDLAKEKAFTAEAIGFNLGLARNSVSKDLNQLWNEGLVVK SQGRPVFFLHRHALELLINRKLDDCECIVHSVASLLPKKEKYTDDDPFSGLIGYDRSLRD AVEKGRAAVLYPHGLHVLLTGASGVGKTFFAELMHCFACKHTIGSPPPLVYFNCAEYAHN PELLSSHLFGHHKGAFTGASENKTGLVEQADGGYLLLDEVHRLPYEGQEKLFSILDKGEY RPLGSSGPTYSISVRLICATTESVNSALLRTFQRRIQVCIDLPGIRQRSVEEQLELIVSF FQRESRKIERTISLDKTLLHWLLSKPLEGNIGQLKSDIQFLCAQAWASGMTERNDTLELD KRLAEMSFNTTPEQRLLVDALFGGKDRLNVDARTLPALKNSLATSAEIEESDLFYSFLTR EYVNLRNSNVPPAETLAILKNKLSSIFEYGLYSRHSAAHPPRYGDQIEERVTLLIGYVEQ VLGFTLPENLANPLRKHFLALIGYVRRGLIPQLYSSSLILDRCKDEYDNATLLCRKINEL LHIQCPATEVVWLCLFLKECRHYRQRIDTSPDCGVILIAHGATTATSQAQYVNRVLERDL FYAIDMPFEQSVHDTLETLTRMIQDRCWQRLILMVDIGSLVHFGSTISKLFQIDVLLLPN ITLTSLLEVGLDLSYETGDLSQLAVLMQSKNIPCRLCTPQQESGGKVLVISCITGMGTAE KIKKVLEESFGELMSQDTRMVILDYNEVRSLERIQQALNASERLAGIVGTFQPGLPDIPF ISLEELFSEQGPELVLSLLTPDLSSSERRLEMERSAMRFISALTMESIINHISVLNPQRI LKEIEDVLNYLTNTLSLKPSRQVTLRFLIHCCCMVERIVINRKPLQMALENRLDLDARAF SVIKSSFLPIEEAYAIRLSDAEYFYIYELLYS >gi|299856449|gb|ADWV01000002.1| GENE 75 80191 - 80619 472 142 aa, chain + ## HITS:1 COG:STM3772 KEGG:ns NR:ns ## COG: STM3772 COG2893 # Protein_GI_number: 16767056 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 142 1 139 141 228 85.0 3e-60 MTTTVPIHPLPEILLLTHGGWGLQLCNSLRMVMGEIEGVTEIALMPVDTLGEFYQRVEAV VKTMPEGSLIVTDFIGGTTSNVAARLSADYPVAVISGLNASLLLEALDKREHGPLTACVA DLVEAGRNSCLDVVSHIRQLQQ >gi|299856449|gb|ADWV01000002.1| GENE 76 80630 - 81115 702 161 aa, chain + ## HITS:1 COG:STM3771 KEGG:ns NR:ns ## COG: STM3771 COG3444 # Protein_GI_number: 16767055 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 295 91.0 3e-80 MANIVLCRIDSRLIHGQVVTKWVGQSQANRIAVVSDELDADPFMKNIYLMAAPPNIKVDC FSNQSFAAAWKENQLGDGNVLVLFPSLAAIQEAVQQGFDVADIQVGGLGGGPNRKAVFQN ITLDEKDVGILNDLKSRGIKAVFQTIPEDKPQSLDDILKKF >gi|299856449|gb|ADWV01000002.1| GENE 77 81141 - 81890 1001 249 aa, chain + ## HITS:1 COG:STM3770 KEGG:ns NR:ns ## COG: STM3770 COG3715 # Protein_GI_number: 16767054 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 1 249 1 249 249 421 96.0 1e-118 MDTLLFASLMGLYYWFARLRLGYTFSAMLLQPVVVAVFVGLLLGNMPAAMIIGAGMQLVY LGVTSTPGGNVPSDPALAACIAIPIAVKANMDPNLAIALAIPFGVIGVFLDQLRRTLNAA WVHMADKHAETANMSAIMRCAFLYPALLGLVLRFPVVFAANYFGQNVVESFLKLMPHWLT HSFEIMGGILPALGFAITIMVIGKKSLLPWFIGGFFAVLYLKVDIMAMAIFGTCVAFLIK GLAKNEGAA >gi|299856449|gb|ADWV01000002.1| GENE 78 81890 - 82747 1098 285 aa, chain + ## HITS:1 COG:STM3769 KEGG:ns NR:ns ## COG: STM3769 COG3716 # Protein_GI_number: 16767053 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 1 285 2 286 286 506 96.0 1e-143 MSDDVMQHELVERARESGTLTKADITKAWFIYWLGAEVSSSYERLQSLIFCASMTPIIKK LYPQKEEQVEALKRHLNFFNSEQTFGAVIQGISIAMEEQKTRGEVINDASITGIKTGLMG PLAGMGDSIIWAAVMPLLIAIFIPFAANGSAMGGILPLILYPAITLAISYGMVHKGYTLG RDSIISLLQGGRIKELIYGANVLGLIMMGALSASFVKITSPLKISALKGSEVVVQQILDS IAPGLLPLAAVFAIYFYLVKKGPRYTTILLSIVALSVVCSLLGVL >gi|299856449|gb|ADWV01000002.1| GENE 79 82751 - 83248 469 165 aa, chain + ## HITS:1 COG:STM3768 KEGG:ns NR:ns ## COG: STM3768 COG1921 # Protein_GI_number: 16767052 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Salmonella typhimurium LT2 # 1 165 1 165 369 248 89.0 3e-66 MTQNIYQQLGLKQVINACGKMTILGVSSVAPEVMQATARAASSFVEIDQLVDKTGELVSR FTGAEDSYVTSCASAGIAIAVAAAITRGDKARVALMPDSSGMANEVVMLRGHNVDYGASI LSAIRLGGGRVVEVGSSNLAALWQLESAITDATAALLYVKSHHCV >gi|299856449|gb|ADWV01000002.1| GENE 80 83255 - 83860 562 201 aa, chain + ## HITS:1 COG:STM3768 KEGG:ns NR:ns ## COG: STM3768 COG1921 # Protein_GI_number: 16767052 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine synthase [seryl-tRNASer selenium transferase] # Organism: Salmonella typhimurium LT2 # 1 201 169 369 369 328 84.0 4e-90 MLNIEDFAHVAQMYNLPLIVDAAAEEDLRAWVVSGADMVVYSGAKAFNAPTSGFITGKKI WIAACKAQHHGIARAMKIGKENMVGLVYALENYHQGQAVITAEQLQPVVEAISAIHGLTA DIEQDEAGRAIWRIRIRVNAQELGVDARVVEAQLRGGDIAIYARRYNLHQGVFSLDPRTV AEGEMALIVARLKEIADHAKD >gi|299856449|gb|ADWV01000002.1| GENE 81 83847 - 84590 657 247 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3062 NR:ns ## KEGG: ECIAI1_3062 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 247 4 250 250 449 100.0 1e-125 MQKINFYRNRVAINVLAKDIANAREIFDAAEGHAVIGVLSAQFSSVDEGIQEVKRWMAEI PSISVGLGAGDPAQYYKAAMIAAQIHPAHVNQTFTGCGFAAGALAATGGEQTHVNALVSP TGTPGEVLISTGVSSSQGTPARVSCDTAVRMMLDMGAHAAKFFPMGGERSLPELYALATT AARNGMTLIEPTGGIDLDNFSVILKTCLEAGVPRIMPHVYSSIIDPDTGYTRPDDVAVLL NKVKSLL >gi|299856449|gb|ADWV01000002.1| GENE 82 84646 - 85404 803 252 aa, chain - ## HITS:1 COG:ECs3811 KEGG:ns NR:ns ## COG: ECs3811 COG0501 # Protein_GI_number: 15833065 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 1 252 43 294 294 465 99.0 1e-131 MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQVKTLSDQACQEMDSKA TIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMT DNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASAGGIVGSLSQSQLGDLGEKLV NSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQ HIRDRMSADGVK >gi|299856449|gb|ADWV01000002.1| GENE 83 85682 - 87673 2487 663 aa, chain + ## HITS:1 COG:ECs3810 KEGG:ns NR:ns ## COG: ECs3810 COG0021 # Protein_GI_number: 15833064 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Escherichia coli O157:H7 # 1 663 1 663 663 1331 99.0 0 MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRF VLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGI ANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIA FYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSL LMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAG QAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKA SQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIHYGVREFGMTAIANG ISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVA SLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGG YVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESV LPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAK ELL >gi|299856449|gb|ADWV01000002.1| GENE 84 87987 - 88430 397 147 aa, chain + ## HITS:1 COG:ECs3809 KEGG:ns NR:ns ## COG: ECs3809 COG1762 # Protein_GI_number: 15833063 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 252 100.0 1e-67 MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYYILA PGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIGLSAADADSHIGAIQALSE LLCEEEILEQLLTASSEKQLADIISRG >gi|299856449|gb|ADWV01000002.1| GENE 85 88458 - 89846 1586 462 aa, chain + ## HITS:1 COG:ECs3808 KEGG:ns NR:ns ## COG: ECs3808 COG2213 # Protein_GI_number: 15833062 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Escherichia coli O157:H7 # 1 462 1 462 462 856 100.0 0 MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWLPNEHFAKIVGPMITYL LPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSMIMGPLGGLVIKYVDKALE KRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANTFVKECIEALVHAGYLPLLSV INEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMVASNPGPGLGLLLAFTLFGKGMS KRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIAGGMSGTWMFNLLDGGLVAGPSPGS IFAYLALTPKGSFLATIAGVTVGTLVSFAITSLILKMEKTVETESEDEFAQSANAVKAMK QEGAFSLSRVKRIAFVCDAGMGSSAMGATTFRKRLEKAGLAIEVKHYAIENVPADADIVV THASLEGRVKRVTDKPLILINNYIGDPKLDTLFNQLTAEHKH >gi|299856449|gb|ADWV01000002.1| GENE 86 89861 - 91138 1291 425 aa, chain + ## HITS:1 COG:ECs3807 KEGG:ns NR:ns ## COG: ECs3807 COG1063 # Protein_GI_number: 15833061 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 425 1 425 425 859 98.0 0 MKTKVAAIYGKRDVRLREFELPEITDNELLVSVISDSVCLSTWKAALLGSEHKRVPDDLE NHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSGYSAGYSYEYFGGNATYMI IPEIAINLGCVLPYHGSYFAAASLAEPMCCIIGAYHANYHTTQYVYEHRMGVKPGGNIAL LACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVDLAASKGIELVYVNTK GMSDPVQTLRALTGDVGFDDIFVYAAVPAVVEMADELLAEDGCLNFFAGPTDKNFKVPFN FYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQLQPSFMVTHIGGLDAVPDTVLNLPDIP GGKKLIYNGVTMPLTAIADFAEKGKTDPLFKELARLVEETHGIWNEQAEKYLLAQFGVDI GEAAQ >gi|299856449|gb|ADWV01000002.1| GENE 87 91135 - 92100 914 321 aa, chain + ## HITS:1 COG:yggF KEGG:ns NR:ns ## COG: yggF COG1494 # Protein_GI_number: 16130831 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Escherichia coli K12 # 1 321 1 321 321 624 98.0 1e-179 MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALNDVAFRGRVVIGEGEID HAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAVMAFAPRDSLLHAPDMYMK KLVVNRLAAGAIDLSLPLADNLRNVARALGKPLDKLRMVTLDKPRLSAAIEEATQLGVKV FALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISACAVKALGGDMQAELIDFCQAKGD YTENRQIAEQERKRCREMGVDVNRVYSLDELVRGNDILFSATGVTGGELVNGIQQTANGV RTQTLLIGGADQTCNIIDSLH >gi|299856449|gb|ADWV01000002.1| GENE 88 92122 - 92631 395 169 aa, chain + ## HITS:1 COG:ECs3805 KEGG:ns NR:ns ## COG: ECs3805 COG3722 # Protein_GI_number: 15833059 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 169 1 169 169 291 97.0 4e-79 MATLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVDNDEEIVEYAVKPLLAQ SGPLDDIDVALRLIYALGKMDKWLYADITHFSQYWHYLNEQDETPGFADDMTWDFISNVN SITCNATLYDALKAMKFADFAVWSEARFSGMVKTALTLAVTTTLKELTP >gi|299856449|gb|ADWV01000002.1| GENE 89 92628 - 93341 432 237 aa, chain + ## HITS:1 COG:ECs3804 KEGG:ns NR:ns ## COG: ECs3804 COG1072 # Protein_GI_number: 15833058 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Escherichia coli O157:H7 # 1 237 1 237 237 474 96.0 1e-134 MKIELTVNGLNVQAQYHDEEIERVHKPLLHMLAALQTVNPQRRTVVFLCAPPGTGKSTLT TFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGAPETFDVAKLAENLRQVVE GDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEKWCQLAQFCDFSIFINAPATA LRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEESLPANLTLMMTATGEYRLVD >gi|299856449|gb|ADWV01000002.1| GENE 90 93313 - 93990 182 225 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] # 1 209 1 205 205 74 26 5e-12 MLTLNKISYRWPGAATDCLCDISLQLKQGEWLALTGDNGAGKSTLLRVMAGLLTPTAGTV MLQQQAMKNLKNRQRAAKVGVLFQEAENQLFHSTVADEIAFGLKLQKCPADEITQRTHAA LQCCQLADTANSHPLDLHSAQRRMVAVACLEALSPPLLLLDEPSRDFDENWLSVFESWLE KCRQRGTSVVAISHDAAFTRRHFSRVVRLEDGLIRNVNPPDDIHP >gi|299856449|gb|ADWV01000002.1| GENE 91 93984 - 94661 550 225 aa, chain - ## HITS:1 COG:ECs3802 KEGG:ns NR:ns ## COG: ECs3802 COG1122 # Protein_GI_number: 15833056 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 451 100.0 1e-127 MVTLEQFRYCPTHSTHPPFCYDFHYVKPGMVAIFGDNGSGKSTLAQLMAGWYPDFLPGEI TGTGTLLGTPIGHLPLNEQSATIQLVQQSPYLQLSGCTFSVEEEVAFGPENLCLAEAEIM ARIDAALTLTECQPLRHRHPATLSGGETQRVVIACAIAMQPKLLILDEAFSRLTPQASEM LLQRLQHWAFERGSLIILFERHRTPFLNYCQQAWQLQNGALQPLC >gi|299856449|gb|ADWV01000002.1| GENE 92 94649 - 95356 417 235 aa, chain - ## HITS:1 COG:ECs3801 KEGG:ns NR:ns ## COG: ECs3801 COG0619 # Protein_GI_number: 15833055 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 407 98.0 1e-113 MHPFTSLTLWALVACTTLILPAQTILPIYSAATFFCLIALKATRRRAKYVVWLMFSLGAG LWLVHGGWLPEWLSGTPRSPERWSHAITLWLRILAIVSTSQLWMQYVPVQCFIRALFASR LPPGVAYLFAGPLLVVEQLKRQLAIIHEAQRARGVPLDEGWYQRLRAMPALIIPLTHNAL NDLAVRGAALDMRAFRIHNRRTTLWAPADSTLQRVARYTMILLMLTEFGAWIWLR >gi|299856449|gb|ADWV01000002.1| GENE 93 95357 - 95935 686 192 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3217 NR:ns ## KEGG: EC55989_3217 # Name: not_defined # Def: putative ABC-type transport system # Organism: E.coli_55989 # Pathway: not_defined # 1 192 34 225 225 269 99.0 4e-71 MARSHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSIGTLISAVLLGPVIGMLTGLL TNLLWGLLTDPIAAAFAPVAMVIGLVAGCLARAGWFRTLPKVVVSGVIITLAVTVVAVPL RTALFGGVTGSGADLFVAWMHSMGQNLVESVAITVIGANLVDKILTAVIVWLLLRQLPIR TTRHFPAMAAVR >gi|299856449|gb|ADWV01000002.1| GENE 94 95958 - 96389 379 143 aa, chain - ## HITS:1 COG:ECs3799 KEGG:ns NR:ns ## COG: ECs3799 COG1661 # Protein_GI_number: 15833053 # Func_class: R General function prediction only # Function: Predicted DNA-binding protein with PD1-like DNA-binding motif # Organism: Escherichia coli O157:H7 # 1 143 1 143 143 275 99.0 2e-74 MMTLPYPYSSSARFYALRLLPGQEVFSQLHAFAQQQQLHAAWIAGCTGSLTDVALRYAGQ EGTTLLNGTFEVISLNGTLEQSGEHLHLCVSDPHGTMLGGHMMPGCTVRTTLELVIGSLE ELAFSRQPCALSGYDELHISPVK >gi|299856449|gb|ADWV01000002.1| GENE 95 96761 - 97780 808 339 aa, chain + ## HITS:1 COG:ECs3798 KEGG:ns NR:ns ## COG: ECs3798 COG0057 # Protein_GI_number: 15833052 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 339 1 339 339 679 100.0 0 MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWE VRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKV LFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTT IHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTI NVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGT QTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMATVAFR >gi|299856449|gb|ADWV01000002.1| GENE 96 97830 - 98993 1424 387 aa, chain + ## HITS:1 COG:pgk KEGG:ns NR:ns ## COG: pgk COG0126 # Protein_GI_number: 16130827 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Escherichia coli K12 # 1 387 1 387 387 717 100.0 0 MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTIELALKQGAKVMVTSHL GRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVAEGELVVLENVRFNKGEKK DDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKE PARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFIAAQGHDVGKSLYEADLVD EAKRLLTTCNIPVPSDVRVATEFSETAPATLKSVNDVKADEQILDIGDASAQELAEILKN AKTILWNGPVGVFEFPNFRKGTEIVANAIADSEAFSIAGGGDTLAAIDLFGIADKISYIS TGGGAFLEFVEGKVLPAVAMLEERAKK >gi|299856449|gb|ADWV01000002.1| GENE 97 99208 - 100287 1193 359 aa, chain + ## HITS:1 COG:Zfba KEGG:ns NR:ns ## COG: Zfba COG0191 # Protein_GI_number: 15803459 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 EDL933 # 1 359 26 384 384 742 100.0 0 MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQ FSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWI DGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTG GEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVYKPGNVVLTPT ILRDSQEYVSKKHNLPHNSLNFVFHGGSGSTAQEIKDSVSYGVVKMNIDTDTQWATWEGV LNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVWLRAGQTSMIARLEKAFQELNAIDVL >gi|299856449|gb|ADWV01000002.1| GENE 98 100645 - 101505 992 286 aa, chain + ## HITS:1 COG:ECs3795 KEGG:ns NR:ns ## COG: ECs3795 COG0668 # Protein_GI_number: 15833049 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 498 100.0 1e-141 MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRK IDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAA GVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSR EPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVW SNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVKEDKAA >gi|299856449|gb|ADWV01000002.1| GENE 99 101644 - 102279 622 211 aa, chain + ## HITS:1 COG:ECs3794 KEGG:ns NR:ns ## COG: ECs3794 COG1279 # Protein_GI_number: 15833048 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 366 99.0 1e-101 MFSYYFQGLALGAAMILPLGPQNAFVMNQGIRRQYHIMIALLCAISDLVLICAGIFGGSA LLMQSPWLLALVTWGGVAFLLWYGFGAFKTAMSSNIELASAEVLKQGRWKIIATMLAVTW LNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWFFGLAILAAWLAPRLRTAKSQ RIINLVVGCVMWFIALQLARDGIAHAQALFS >gi|299856449|gb|ADWV01000002.1| GENE 100 102372 - 103112 785 246 aa, chain + ## HITS:1 COG:ECs3793 KEGG:ns NR:ns ## COG: ECs3793 COG2968 # Protein_GI_number: 15833047 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 410 100.0 1e-114 MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDIATLAIEVNVAAKDAAT AKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDGKSILKGYRAVRTVEVTLR QLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKAAIDNAIHQAQELANGFHRKL GPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQAAIQFDDQVDVVFQLEPVDQQPA KTPAAQ >gi|299856449|gb|ADWV01000002.1| GENE 101 103279 - 104175 741 298 aa, chain + ## HITS:1 COG:ygfI KEGG:ns NR:ns ## COG: ygfI COG0583 # Protein_GI_number: 16130822 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 298 6 303 303 594 99.0 1e-170 MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISL NKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEG VTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYE ERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHF LTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTNH >gi|299856449|gb|ADWV01000002.1| GENE 102 104172 - 105650 1270 492 aa, chain - ## HITS:1 COG:ygfH KEGG:ns NR:ns ## COG: ygfH COG0427 # Protein_GI_number: 16130821 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Escherichia coli K12 # 1 492 1 492 492 984 99.0 0 METQWTRMTANEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARRANEQHEAKKPYQIRLL TGASISAAADDVLSDADAVSWRAPYQTSSGLRKKINQGAVSFVDLHLSEVAQMVNYGFFG DIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIELNNYHDPRVAELADIVIPGA PPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPDAGNMLDKQNPMCQQIADNVVTF LLQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENPEIPPFMMYSEVLQKSVVHLLETGK ISGASASSLTISADSLRKIYDNMDYFASRIVLRPQEISNNPEIIRRLGVIALNVGLEFDI YGHANSTHVAGVDLMNGIGGSGDFERNAYLSIFMAPSIAKEGKISTVVPMCSHVDHSEHS VKVIITEQGIADLRGLSPLQRARTIIDNCAHPMYRDYLHRYLENAPGGHIHHDLSHVFDL HRNLIATGSMLG >gi|299856449|gb|ADWV01000002.1| GENE 103 105674 - 106459 929 261 aa, chain - ## HITS:1 COG:ECs3789 KEGG:ns NR:ns ## COG: ECs3789 COG1024 # Protein_GI_number: 15833043 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli O157:H7 # 1 261 15 275 275 525 100.0 1e-149 MSYQYVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSK VFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDL IIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNH VVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDS EDYQEGMNAFLEKRKPNFVGH >gi|299856449|gb|ADWV01000002.1| GENE 104 106470 - 107465 854 331 aa, chain - ## HITS:1 COG:argK KEGG:ns NR:ns ## COG: argK COG1703 # Protein_GI_number: 16130819 # Func_class: E Amino acid transport and metabolism # Function: Putative periplasmic protein kinase ArgK and related GTPases of G3E family # Organism: Escherichia coli K12 # 1 331 1 331 331 655 99.0 0 MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLLDAIMPYCGNALRLGVT GTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIR PVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGG DDLQGIKKGLMEVADLLVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQPRVLTCSA LEKRGIDEIWHAIIDFKTALTASGRLQQVRQQQSVEWLRKQTEEEVLNHLFANEDFDRYY RQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD >gi|299856449|gb|ADWV01000002.1| GENE 105 107458 - 109602 2307 714 aa, chain - ## HITS:1 COG:sbm_1 KEGG:ns NR:ns ## COG: sbm_1 COG1884 # Protein_GI_number: 16130818 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, N-terminal domain/subunit # Organism: Escherichia coli K12 # 1 585 1 585 585 1131 99.0 0 MSNEQEWQQLANKELSRREKTVDSLVQQTAEGIAIKPLYTEADLDNLEVTGTLPGLPPYV RGPRATMYTAQPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLATHRGYDSDNPR VAGDVGKAGVAIDTVEDMKVLFDQIPLDKMSVSMTMNGAVLPVLAFYIVAAEEQGVTPDK LTGTIQNDILKEYLCRNTYIYPPKPSMRIIADIIAWCSGNMPRFNTISISGYHMGEAGAN CVQQVAFTLADGIEYIKAAISAGLKIDDFAPRLSFFFGIGMDLFMNVAMLRAARYLWSEA VSGFGAQDPKSLALRTHCQTSGWSLTEQDPYNNVIRTTIEALAATLGGTQSLHTNAFDEA LGLPTDFSARIARNTQIIIQEESELCRTVDPLAGSYYIESLTDQIVKQARAIIQQIDEAG GMAKAIEAGLPKRMIEEASAREQSLIDQGKRVIVGVNKYKLDHEDETDVLEIDNVMVRNE QIASLERIRATRDDAAVTAALNALTHAAQHNENLLAAAVNAARVRATLGEISDALEVAFD RYLVPSQCVTGVIAQSYHQSEKSASEFDAIVAQTEQFLADNGRRPRILIAKMGQDGHDRG AKVIASAYSDLGFDVDLSPMFSTPEEIARLAVENDVHVVGASSLAAGHKTLIPELVEALK KWGREDICVVAGGVIPPQDYAFLQERGVAAIYGPGTPMLDSVRGVLNLISQHHD >gi|299856449|gb|ADWV01000002.1| GENE 106 109806 - 110699 867 297 aa, chain - ## HITS:1 COG:ECs3786 KEGG:ns NR:ns ## COG: ECs3786 COG0583 # Protein_GI_number: 15833040 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 297 1 297 297 577 100.0 1e-165 MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPT EQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIR LNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNG VTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMI PHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD >gi|299856449|gb|ADWV01000002.1| GENE 107 110841 - 111026 111 61 aa, chain + ## HITS:1 COG:yqfE KEGG:ns NR:ns ## COG: yqfE COG0583 # Protein_GI_number: 16130816 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 61 1 76 76 103 80.0 1e-22 MHFAQRVRALVVLNGVALLPLFAPWSGIPRPLYALFAGRKGMPAIARYFMDELTTRLANG V >gi|299856449|gb|ADWV01000002.1| GENE 108 111082 - 111741 834 219 aa, chain + ## HITS:1 COG:ECs3785 KEGG:ns NR:ns ## COG: ECs3785 COG0120 # Protein_GI_number: 15833039 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 397 100.0 1e-111 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVSSSDASTEKL KSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADAS KQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGVVTDNGNVILDVHGMEILDPI AMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK >gi|299856449|gb|ADWV01000002.1| GENE 109 111997 - 113229 1369 410 aa, chain + ## HITS:1 COG:ECs3784 KEGG:ns NR:ns ## COG: ECs3784 COG0111 # Protein_GI_number: 15833038 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 410 1 410 410 802 100.0 0 MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDDEQLKESIRDAHFIGLR SRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGEL LLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFY DIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASR GTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTPHIGGSTQEA QENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPLHGGRRLMHIHENRPGVLTALNKIFAE QGVNIAAQYLQTSAQMGYVVIDIEADEDVAEKALQAMKAIPGTIRARLLY >gi|299856449|gb|ADWV01000002.1| GENE 110 114010 - 114612 467 200 aa, chain - ## HITS:1 COG:ECs3782 KEGG:ns NR:ns ## COG: ECs3782 COG0212 # Protein_GI_number: 15833036 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Escherichia coli O157:H7 # 19 200 1 182 182 356 100.0 1e-98 MTQLPELPLTLSRQEIRKMIRQRRRALTPEQQQEMGQQAATRMMTYPPVVMAHTVAVFLS FDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVR DVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEKLP VEEWDIPLPAVVTPSKVWEW >gi|299856449|gb|ADWV01000002.1| GENE 111 114858 - 115187 369 109 aa, chain - ## HITS:1 COG:ECs3781 KEGG:ns NR:ns ## COG: ECs3781 COG3027 # Protein_GI_number: 15833035 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 163 100.0 6e-41 MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKERTRVTNTEQLVFIAALN ISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITEKTNQNFE >gi|299856449|gb|ADWV01000002.1| GENE 112 115355 - 115933 657 192 aa, chain + ## HITS:1 COG:ECs3780 KEGG:ns NR:ns ## COG: ECs3780 COG3079 # Protein_GI_number: 15833034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 192 3 194 194 359 100.0 1e-99 MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDSSWLPLLHDLTNEGMAF GHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRADALAGWVNHFLLGLGVTQ PKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEEIIEYVRVAALLCHDTFTHPQ PTAPEVQKPTLH >gi|299856449|gb|ADWV01000002.1| GENE 113 115959 - 117284 1389 441 aa, chain + ## HITS:1 COG:ECs3779 KEGG:ns NR:ns ## COG: ECs3779 COG0006 # Protein_GI_number: 15833033 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Escherichia coli O157:H7 # 1 441 1 441 441 902 99.0 0 MSEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPE AVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQ LLNGLDVVYHAQGEYAYADEIVNSALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPE EIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENG CILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLET SLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLD VHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITETGNENL TASVVKKPEEIEALMAAARKQ >gi|299856449|gb|ADWV01000002.1| GENE 114 117281 - 118459 1032 392 aa, chain + ## HITS:1 COG:ubiH KEGG:ns NR:ns ## COG: ubiH COG0654 # Protein_GI_number: 16130809 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 392 1 392 392 741 98.0 0 MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPGFDGRAIALAAGTCQQL ARIGVWQSLADYATAITTVHVSDRGHAGFVTLAAEDYQLAALGQVVELHNVGQRLFALLR KAPGVTLHCPDRVANVARTQSHVEVTLESGETLTGRVLVAADGTHSALATACGVDWQQEP YEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDGRCSLVWCHPLERREEVLSWSDE KFCRELQSAFGWRLGKITHAGKRSAYPLALTRAARAITHRTVLVGNAAQTLHPIAGQGFN LGMRDVMSLAETLTQAHERGEDIGDYGILCRYQQRRQSDREATIGVTDSLVHLFANRWAP LVVGRNIGLMTMELFTPARDVLAQRTLGWVAR >gi|299856449|gb|ADWV01000002.1| GENE 115 118482 - 119684 1284 400 aa, chain + ## HITS:1 COG:ECs3777 KEGG:ns NR:ns ## COG: ECs3777 COG0654 # Protein_GI_number: 15833031 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 808 99.0 0 MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAADAPPQLRVSAINAASEKL LTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYSHLGHIVENSVIHYALWNK AQQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLVIGADGANSWLRNKADIPLTF WDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQA SEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYARQFAAHRLVLVGDAAHTIHPLAGQ GVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGT NPAKKLLRDIGLKLADTLPGVKPQLIRQAMGLNDLPEWLR >gi|299856449|gb|ADWV01000002.1| GENE 116 119972 - 121225 1392 417 aa, chain + ## HITS:1 COG:gcvT KEGG:ns NR:ns ## COG: gcvT COG0404 # Protein_GI_number: 16130807 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system T protein (aminomethyltransferase) # Organism: Escherichia coli K12 # 54 417 1 364 364 749 100.0 0 MINFTLWLTVCFGGKFRQKRTIALGTGSGSDAGFRGDNFTMKSCQPRLFNEDKMAQQTPL YEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDAGMFDVSHMTIVDLRGSRTREFLR YLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQ HAEPFGIEITVRDDLSMIAVQGPNAQAKAATLFNDAQRQAVEGMKPFFGVQAGDLFIATT GYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRLEAGMNLYGQEMDETISPL AANMGWTIAWEPADRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVRFTDAQGNQ HEGIITSGTFSPTLGYSIALARVPEGIGETAIVQIRNREMPVKVTKPVFVRNGKAVA >gi|299856449|gb|ADWV01000002.1| GENE 117 121249 - 121638 531 129 aa, chain + ## HITS:1 COG:ECs3775 KEGG:ns NR:ns ## COG: ECs3775 COG0509 # Protein_GI_number: 15833029 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Escherichia coli O157:H7 # 1 129 1 129 129 216 99.0 6e-57 MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAV AESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDAT AYETLLEDE >gi|299856449|gb|ADWV01000002.1| GENE 118 121757 - 124630 3504 957 aa, chain + ## HITS:1 COG:ECs3774_2 KEGG:ns NR:ns ## COG: ECs3774_2 COG1003 # Protein_GI_number: 15833028 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain # Organism: Escherichia coli O157:H7 # 451 957 1 507 507 1028 99.0 0 MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQIVPKDIQLATPPQVGA PATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNMLENPGWYTAYTPYQPEVS QGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAMAKRVSKLKNANRFFVASDVH PQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQQVGTTGEIHDYTALISELKSRK IVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEYKRSMPGR IIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVYHGPVGLKRI ANRIHRLTDILAAGLQQKGLKLRHAHYFDTLCVEVADKAGVLTRAEAAEINLRSDILNAV GITLDETTTRENVMQLFSVLLGDNHGLEIDTLDKDVAHDSRSIQPAMLRDDEILTHPVFN RYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPE QAEGYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLI PASAHGTNPASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVY EETIREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPG MGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKK ASQVAILNANYIASRLQDAFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDY GFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNA PHIQNELVAEWAHPYSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ >gi|299856449|gb|ADWV01000002.1| GENE 119 124904 - 125647 253 247 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 5 247 7 240 242 102 31 3e-20 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADI SDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCR EAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKGAIDTLTTGLSLEVAAQGIR VNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGSF IDLAGGK >gi|299856449|gb|ADWV01000002.1| GENE 120 125704 - 127143 1630 479 aa, chain - ## HITS:1 COG:bglA KEGG:ns NR:ns ## COG: bglA COG2723 # Protein_GI_number: 16130803 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 479 1 479 479 1004 99.0 0 MIVKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKY YPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDE LLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNE INNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGC MLAMVPLYPYCCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGD LDVLREGTCDYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPYVKASDWGWQIDPVGLRY ALCELYERYQRSLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLM GYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGAGDMSRSRKKSFNWYQEVIASNGEKL >gi|299856449|gb|ADWV01000002.1| GENE 121 127182 - 127493 377 103 aa, chain + ## HITS:1 COG:ECs3772 KEGG:ns NR:ns ## COG: ECs3772 COG3097 # Protein_GI_number: 15833026 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 103 1 103 103 185 99.0 2e-47 MQPNDITFFQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRFEDDGYFCTIEVTATST VTLDTLTEKHAEQENMTLTELIKVIADIYPGQTQFYVIEFKCL >gi|299856449|gb|ADWV01000002.1| GENE 122 127657 - 128316 737 219 aa, chain + ## HITS:1 COG:ECs3771 KEGG:ns NR:ns ## COG: ECs3771 COG1272 # Protein_GI_number: 15833025 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 357 100.0 1e-98 MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDLNASATAITSYSLYGGS MILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPFLLVGLDSPLARGLMIVIW SLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMAVKLAAGSVTLLAVGGVVYSL GVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQA >gi|299856449|gb|ADWV01000002.1| GENE 123 128393 - 129373 1183 326 aa, chain - ## HITS:1 COG:ygfZ KEGG:ns NR:ns ## COG: ygfZ COG0354 # Protein_GI_number: 16130800 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Escherichia coli K12 # 1 326 1 326 326 627 100.0 1e-179 MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQVTADVSQMAEDQHLLA AHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYAVFSKVTIAPDDERVLLGV AGFQARAALANLFSELPSKEKQVVKEGATTLLWFEHPAERFLIVTDEATANMLTDKLRGE AELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKF RGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDM EPDSIFRVRDDANTLHIEPLPYSLEE >gi|299856449|gb|ADWV01000002.1| GENE 124 129616 - 129882 301 88 aa, chain + ## HITS:1 COG:ECs3769 KEGG:ns NR:ns ## COG: ECs3769 COG2938 # Protein_GI_number: 15833023 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 88 1 88 88 171 100.0 4e-43 MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMN HGKPADAELEMMVRLIQTRNRERGPVAI >gi|299856449|gb|ADWV01000002.1| GENE 125 129863 - 130270 259 135 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3471 NR:ns ## KEGG: ECO103_3471 # Name: ygfX # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 135 1 135 135 215 100.0 3e-55 MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRI NARQGEIRLLMDGRLRWQGQEWCIVKAPWMIKSGMMLRLRSDGGKRQHLWLAADSMDEAE WRDLRRILLQQETQR >gi|299856449|gb|ADWV01000002.1| GENE 126 130310 - 130831 774 173 aa, chain - ## HITS:1 COG:ECs3767 KEGG:ns NR:ns ## COG: ECs3767 COG0716 # Protein_GI_number: 15833021 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 342 100.0 2e-94 MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLMEQYDVLILGIPTWDFGE IQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALGMLHDKLSTKGVKFVGYWP TEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSWCEQILNEMAEHYA >gi|299856449|gb|ADWV01000002.1| GENE 127 130943 - 131839 798 298 aa, chain + ## HITS:1 COG:xerD KEGG:ns NR:ns ## COG: xerD COG4974 # Protein_GI_number: 16130796 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Escherichia coli K12 # 1 298 1 298 298 548 100.0 1e-156 MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLA ERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVER LLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVP LGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA >gi|299856449|gb|ADWV01000002.1| GENE 128 131864 - 132574 795 236 aa, chain + ## HITS:1 COG:ECs3765 KEGG:ns NR:ns ## COG: ECs3765 COG1651 # Protein_GI_number: 15833019 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 468 100.0 1e-132 MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPVAGMKTVLTNSGVLYIT DDGKHIIQGPMYDVSGTAPVNVTNKMLLKQLNALEKEMIVYKAPQEKHVITVFTDITCGY CHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAP ASCDVDIADHYALGVQLGVSGTPAVVLSNGTLVPGYQPPKEMKEFLDEHQKMTSGK >gi|299856449|gb|ADWV01000002.1| GENE 129 132580 - 134313 1915 577 aa, chain + ## HITS:1 COG:ECs3764 KEGG:ns NR:ns ## COG: ECs3764 COG0608 # Protein_GI_number: 15833018 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Escherichia coli O157:H7 # 1 577 1 577 577 1152 99.0 0 MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGETLPAAEAIINPNLR DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPL DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQKLAASDLGFALGPRLNAAGRLDDM SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQVEALTLCEKLERSRDTLPGGLAM YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP GMMLKFGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSPAEMTME VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI >gi|299856449|gb|ADWV01000002.1| GENE 130 134621 - 135502 1002 293 aa, chain + ## HITS:1 COG:ECs3763 KEGG:ns NR:ns ## COG: ECs3763 COG1186 # Protein_GI_number: 15833017 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Escherichia coli O157:H7 # 1 293 73 365 365 542 100.0 1e-154 MKQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDI QAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWL RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED NKSDIGWGSQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL >gi|299856449|gb|ADWV01000002.1| GENE 131 135512 - 137029 2143 505 aa, chain + ## HITS:1 COG:lysS KEGG:ns NR:ns ## COG: lysS COG1190 # Protein_GI_number: 16130792 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Escherichia coli K12 # 1 505 1 505 505 1003 99.0 0 MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEE LEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD ILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDES RNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRT LAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGI HVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDINPEITDRFEFFIGG REIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPVK >gi|299856449|gb|ADWV01000002.1| GENE 132 137072 - 137620 428 182 aa, chain - ## HITS:1 COG:idi KEGG:ns NR:ns ## COG: idi COG1443 # Protein_GI_number: 16130791 # Func_class: I Lipid transport and metabolism # Function: Isopentenyldiphosphate isomerase # Organism: Escherichia coli K12 # 1 182 1 182 182 369 98.0 1e-102 MQTEHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLFNAKGQLLVTRRALSKKAWPG VWTNSVCGHPQLGESSEDAVIRRCRYELGVEITPPESIYPDFRYRATDPSGIVENEVCPV FAARTTSALQINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREARIRLSAFTQ LK >gi|299856449|gb|ADWV01000002.1| GENE 133 137743 - 137868 95 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNFLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF >gi|299856449|gb|ADWV01000002.1| GENE 134 137870 - 139318 375 482 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 29 440 15 416 447 149 27 2e-34 MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSK EAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLG IFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYG NPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFA IVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGV GTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQF VLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVL QPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEH GE >gi|299856449|gb|ADWV01000002.1| GENE 135 139739 - 141673 1114 644 aa, chain + ## HITS:1 COG:ECs3759_2 KEGG:ns NR:ns ## COG: ECs3759_2 COG0493 # Protein_GI_number: 15833013 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli O157:H7 # 158 644 1 487 487 998 99.0 0 MKGMQMNKFIAAEAAECIGCHACEIACAVAHNQENWPLSHSDFRPRIHVVGKGQAANPVA CHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQKCDLC NQRSSGTQACIEVCPTQALRLMDDKGLQWIKVARQRKTAAGKASSDAQPSRSAALLPVNS RKGADKISASERKTHFGEIYCGLDPLQATYESDRCVYCAEKANCNWHCPLHNAIPDYIRL VQEGKIIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVSIGNLERYITDTAL AMGWRPDVSKVVPRSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPP FKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFSDLTSEYDAVFIGVGTYGMMRADLPH EDAPGVIQALPFLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNA ASVTCAYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGE PGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHAMPWLQGSGIKLDKWGLIQTGDVGYLP TQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLTLFDTKAS >gi|299856449|gb|ADWV01000002.1| GENE 136 141673 - 142161 234 162 aa, chain + ## HITS:1 COG:ygfS KEGG:ns NR:ns ## COG: ygfS COG1142 # Protein_GI_number: 16130788 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli K12 # 1 162 2 163 163 267 100.0 5e-72 MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCEN APCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLC EQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENPL >gi|299856449|gb|ADWV01000002.1| GENE 137 142197 - 143564 1280 455 aa, chain - ## HITS:1 COG:ECs3757 KEGG:ns NR:ns ## COG: ECs3757 COG2252 # Protein_GI_number: 15833011 # Func_class: R General function prediction only # Function: Permeases # Organism: Escherichia coli O157:H7 # 1 455 1 455 455 711 100.0 0 MSGDILQTPDAPKPQGALDNYFKITARGSTVRQEVLAGLTTFLAMVYSVIVVPGMLGKAG FPPAAVFVATCLVAGFGSLLMGLWANLPMAIGCAISLTAFTAFSLVLGQQISVPVALGAV FLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLLLIAANGVGMVIKNPIEGLPV ALGAFTSFPVMMSLLGLAVIFGLEKCRVPGGILLVIIAISIIGLIFDPAVKYHGLVAMPS LTGEDGKSLIFSLDIMGALQPTVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDNQIIN GGKALTSDSVSSIFSGLVGAAPAAVYIESAAGTAAGGKTGLTATVVGALFLLILFLSPLS FLIPGYATAPALMYVGLLMLSNVSKLDFNDFIDAMAGLVCAVFIVLTCNIVTGIMLGFVT LVVGRVFAREWQKLNIGTVIITAALVAFYAGGWAI >gi|299856449|gb|ADWV01000002.1| GENE 138 143600 - 144916 1418 438 aa, chain - ## HITS:1 COG:ECs3756 KEGG:ns NR:ns ## COG: ECs3756 COG0402 # Protein_GI_number: 15833010 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 1 438 2 439 439 917 99.0 0 MSGEHTLKAVRGSFIDVTRTVDNPEEIASALRFIEDGLLLIKQGKVEWFGEWEDGKHQIP DTIRVRDYRGKLIVPGFVDTHIHYPQSEMVGAYGEQLLEWLNKHTFPTERRYEDLEYARE MSAFFIKQLLRNGTTTALVFGTVHPQSVDALFEAASHINMRMIAGKVMMDRNAPDYLLDT AESSYHQSKELIERWHKNGRLLYAITPRFAPTSSPEQMAMAQRLKEEYPDTWVHTHLCEN KDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDRLSETKSSIAFCPTS NLYLGSGLFNLKKAWQKKVKVGMGTDIGAGTTFNMLQTLNEAYKVLQLQGYRLSAYEAFY LATLGGAKSLGLDDLIGNFLPGKEADFVVMEPTATPLQQLRYDNSVSLVDKLFVMMTLGD DRSIYRTYVDGRLVYERN >gi|299856449|gb|ADWV01000002.1| GENE 139 144934 - 146334 292 466 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 45 453 27 425 447 117 25 9e-25 MSDINNAGSDLIFELEDRPPFHQALVGAITHLLAIFVPMVTPALIVGAALQLSAETTAYL VSMAMIASGIGTWLQVNRYGIVGSGLLSIQSVNFSFVTVMIALGSSMKSDGFHEELIMSS LLGVSFVGAFLVVGSSFILPYLRRVITPTVSGIVVLMIGLSLIKVGIIDFGGGFAAKSSG TFGNYEHLGVGLLVLIVVIGFNCCRSPLLRMGGIAIGLCVGYIASLCLGMVDFSSMRNLP LITIPHPFKYGFSFSFHQFLVVGTIYLLSVLEAVGDITATAMVSRRPIQGEEYQSRLKGG VLADGLVSVIASAVGSLPLTTFAQNNGVIQMTGVASRYVGRTIAVMLVILGLFPMIGGFF TTIPSAVLGGAMTLMFSMIAIAGIRIIITNGLKRRETLIVATSLGLGLGVSYDPEIFKIL PASIYVLVENPICAGGLTAILLNIILPGGYRQENVLPGITSAEEMD >gi|299856449|gb|ADWV01000002.1| GENE 140 146499 - 149369 3000 956 aa, chain - ## HITS:1 COG:ECs3754_2 KEGG:ns NR:ns ## COG: ECs3754_2 COG1529 # Protein_GI_number: 15833008 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli O157:H7 # 160 956 1 797 797 1638 99.0 0 MIIHFTLNGAPQELTVNPGENVQKLLFNMGMHSVRNSDDGFGFAGSDAIIFNGNIVNASL LIAAQLEKADIRTAESLGKWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAPT REEIDDALSGLFSRDAGWQQYYQVIELAVARKNNPQATIDIAPTFRDDLEVIGKHYPKTD AAKMVQAKPCYVEDRVTADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPD IYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEYEVLKPV MSIDEAMAEDAPVVHDEPVVYVAGVPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAAS IHGHIGDMDKGFADADVIIERTYNSTQAQQCPTETHICFTRMDGDRLVIHASTQVPWHLR RQVARLVGMKQHKVHVIKERVGGGFGSKQDILLEEVCAWATCVTGRPVLFRYTREEEFIA NTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPCDNVD FQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKI LGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPKPQNGDWHIGRGVAIIMQKSGIP DIDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHAL FDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEAVADVQLATPGVVRGKKGEVS FGDIAHKGETGTGFGSLVGTGSYITPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCG TPVNPELALGQIYGATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVL VPSDDKVGPFGAKSISEIGVNGAAPAIATAIHDACGIWLREWHFTPEKILTALEKI >gi|299856449|gb|ADWV01000002.1| GENE 141 149366 - 150145 859 259 aa, chain - ## HITS:1 COG:ECs3753 KEGG:ns NR:ns ## COG: ECs3753 COG1319 # Protein_GI_number: 15833007 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 499 99.0 1e-141 MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWVDWD NGALRIGAMSRLQPLRDARFIPAALREALGFVYSRHVRNQSTIGGEIAARQEESVLLPVL LALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRTCATRKISRSQAGLTVVTAAV AMTDHDGMRIALDGVASKALRLHDVEKQNLEGNALEQAVANAIFPQEDLRGSVAYKRYIS GVLVADLYADCQQAEEEAV >gi|299856449|gb|ADWV01000002.1| GENE 142 150196 - 151524 1324 442 aa, chain - ## HITS:1 COG:ssnA KEGG:ns NR:ns ## COG: ssnA COG0402 # Protein_GI_number: 16130781 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 442 23 464 464 904 98.0 0 MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASYKEMHGRIVMPGIVC SHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCT SVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARQI DEAKKAATEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHH WYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHH LSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLRPDSFAKALTNGNELMSRNFGAKF GLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDC DSIYAQARKAAASMWRRMDALA >gi|299856449|gb|ADWV01000002.1| GENE 143 151527 - 154625 2783 1032 aa, chain - ## HITS:1 COG:ygfK_2 KEGG:ns NR:ns ## COG: ygfK_2 COG0493 # Protein_GI_number: 16130780 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 451 1032 1 582 582 1219 98.0 0 MGDIMRPIPFEELLTRIFDEYQQQRSIFGIPEQQFYSPVKGKTVSVFGETCATPVGPAAG PHTQLAQNIVTSWLTGGRFIELKTVQILDRLELEKPCIDAEDECFNTEWSTEFTLLKAWD EYLKAWFALHLLEAMFQPSDSGKSFIFNMSVGYNLEGIKQPPMQQFIDNMMDASDHPKFA QYRDTLNKLLQDDAFLARHGLQEKRESLQALPARIPTSMVHGVTLSTMHGCPPHEIEAIC RYMLEEKGLNTFVKLNPTLLGYARVREILDVCGFGYIGLKEESFDHDLKLTQALEMLERL MALAKEKSLGFGVKLTNTLGTINNKGALPGEEMYMSGRALFPLSINVAAVLSRAFDGKLP ISYSGGASQLTIRDIFDTGIRPITMATDLLKPGGYLRLSACMRELEGSDAWGLDHVDVER LNRLAADALTMEYTQKHWKPEERIEVAEDLPLTDCYVAPCVTACAIKQDIPEYIRLLGEH RYADALELIYQRNALPAITGHICDHQCQYNCTRLDYDSALNIRELKKVALEKGWDEYKQR WHKPAGSGSRHPVAVIGAGPAGLAAGYFLARAGHPVTLFEREANAGGVVKNIIPQFRIPA ELIQHDIDFVAAHGVKFEYGCSPDLTVEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVW KSLPFLREYNKGTALKLGKHVVVVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAW REEYEEALHDGVEFRFLNNPECFDADGTLTLRVMSLGEPDEKGRRRPVETNETVTLHVDS LITAIGEQQDTEALNAMGVPLDKNGWPDVDHNGETRLTDVFMIGDVQRGPSSIVAAVGTT RRATDAILSRENIRSHQNNKYWNNVNPAEIYQRKGDISITLVNSDDRDAFVAQEAARCLE CNYVCSKCVDVCPNRANVSIAVPGFQNRFQTLHLDAYCNECGNCAQFCPWNGKPYKDKIT VFSLSQDFDNSSNPGFLVEDCRVRVRLNNQSWVLNIDSEGQFDNVPPELNDMCRIISHVH QHHHYLLGRVEV >gi|299856449|gb|ADWV01000002.1| GENE 144 154947 - 155525 187 192 aa, chain - ## HITS:1 COG:ygfJ KEGG:ns NR:ns ## COG: ygfJ COG2068 # Protein_GI_number: 16130779 # Func_class: R General function prediction only # Function: Uncharacterized MobA-related protein # Organism: Escherichia coli K12 # 1 192 1 192 192 395 99.0 1e-110 MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHER YANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDG AILPLHNGIPGHPILVSKPCLIQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPD DFITAKERYTEI >gi|299856449|gb|ADWV01000002.1| GENE 145 155796 - 156398 185 200 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_2996 NR:ns ## KEGG: ECIAI1_2996 # Name: yqeC # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 200 57 256 256 419 100.0 1e-116 MFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECD VILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITG LTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDV EAIWLGDIQEHPAIARRFVN >gi|299856449|gb|ADWV01000002.1| GENE 146 156446 - 158071 1356 541 aa, chain + ## HITS:1 COG:yqeB KEGG:ns NR:ns ## COG: yqeB COG1975 # Protein_GI_number: 16130777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Escherichia coli K12 # 1 541 1 541 541 1046 99.0 0 MNIFTEAAKLEEQNCPFAMAQIVDSRGSTPRHSAQMLVRADGSIVGTIGGGMVERKVIEE SLQALQERKPRLFHGRMARNGADAVGSDCGGAMSVFISVHGMRPRLVLIGAGHVNRAIAQ SAALLGFDIAVADIYRESLNPELFPPSTTLLHAESFGAAVEALDIRPDNFVLIATNNQDR EALDKLIEQPIAWLGLLASRRKVQLFLRQLREKGVAEEHIARLHAPVGYNIGAETPQEIA ISVLAEILQVKNNAPGGLMMKPSHPSGHQLVVIRGAGDIASGVALRLYHAGFKVIMLEVE KPTVIRCTVAFAQAVFDGEMTVEGVTARLATSSAEAMKLTERGFIPVMADPACSLLDELK PLCVVDAILAKQNLGTRADMAPVTIALGPGFTAGKDCHAVIETNRGHWLGQVIYSGCAQE NTGVPGNIMGHTTRRVIRAPAAGIMRSNVKLGDLVKEGDVIAWIGEHEIKAPLTGMVRGL LNDGLAVVGGFKIGDIDPRGETADFTSVSDKARAIGGGVLEALMMLMHQGVKATKEVLEV A >gi|299856449|gb|ADWV01000002.1| GENE 147 158112 - 159044 1227 310 aa, chain - ## HITS:1 COG:yqeA KEGG:ns NR:ns ## COG: yqeA COG0549 # Protein_GI_number: 16130776 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 1 310 1 310 310 561 99.0 1e-160 MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIVTHGNGPQVGMINQAFE AAAKTEAHSPMLPMSVCVALSQGYIGYDLQNALREELLSRGINKPVATLVTQVEVDANDP AFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVVASPKPVDIIEKETVKALVDA GQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLAEMIDADMLIILTAVEKVAINFG KENEQWLDRLSLSDAERLIEEGHFAKGSMLPKVEAAASFARSRAGREALITVLSKAKEGI EGKTGTVICQ >gi|299856449|gb|ADWV01000002.1| GENE 148 159092 - 160477 1100 461 aa, chain - ## HITS:1 COG:ECs3746 KEGG:ns NR:ns ## COG: ECs3746 COG0044 # Protein_GI_number: 15833000 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Escherichia coli O157:H7 # 1 461 5 465 465 984 100.0 0 MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQLPYEEIDATGCYVFPGGVDVHT HFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVI DYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTYQYKLNDDEVLQALRRLHESGALTT VHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLYIVHL SNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWC GISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPE RFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRHLHDNADYSPWEGFT CQGAIVRTLSRGETIFCDGTFTGKAGRGRFLRRKPFVPPVL >gi|299856449|gb|ADWV01000002.1| GENE 149 160530 - 161741 1587 403 aa, chain - ## HITS:1 COG:ECs3745 KEGG:ns NR:ns ## COG: ECs3745 COG0624 # Protein_GI_number: 15832999 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli O157:H7 # 1 403 1 403 403 848 99.0 0 MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEID PMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMA SMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQI YRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLT VSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRP SWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGI PVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE >gi|299856449|gb|ADWV01000002.1| GENE 150 161799 - 162995 1185 398 aa, chain - ## HITS:1 COG:ECs3744 KEGG:ns NR:ns ## COG: ECs3744 COG1171 # Protein_GI_number: 15832998 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 398 1 398 398 824 99.0 0 MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRPTPLCALDDLANLFGVK KILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTTD GNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQ QHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGV LGYLVDVYSPQNLHSIIVEPDKADCIYRSCVKGDIVNVGGDMATIMAGLACGEPNPLGWE ILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLM EKLALNKDAVVLVISTEGDTDVKHYREVVWEGKHAVAP >gi|299856449|gb|ADWV01000002.1| GENE 151 163053 - 164240 1538 395 aa, chain - ## HITS:1 COG:ECs3743 KEGG:ns NR:ns ## COG: ECs3743 COG0078 # Protein_GI_number: 15832997 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Escherichia coli O157:H7 # 1 395 2 396 396 807 100.0 0 MKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSG LGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGI RDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFG SLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAK NNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEQRTELLRANDHEGLKALEKQCL AQNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEA SWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK >gi|299856449|gb|ADWV01000002.1| GENE 152 164719 - 166497 946 592 aa, chain + ## HITS:1 COG:ygeV KEGG:ns NR:ns ## COG: ygeV COG3829 # Protein_GI_number: 16130771 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli K12 # 1 592 1 592 592 1179 99.0 0 MELATTQSVLMQIQPTIQRFARMLASVLQLEVEIVDENLCRVAGTGAYGKFLGRQLSGNS RLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLGTPVILQDRCVGVISLIAVTH EQQEHISDNLREFSDYVRHISTIFVSKLLEDQGPGDNISKIFATMIDNMDQGVLVVDDES RVQFVNQTALKTLGVVQNNIIGKPIRFRPLTFESNFTHGHMQHIVSWDDKSELIIGQLHN IQGRQLFLMAFHQSHTSFSVANAPDEPHIEQLVGECRVMRQLKRLISRIAPSPSSVMVVG ESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPEQLLESELFGYVKGAFTGASANGKTGL IQAANTGTLFLDEIGDMPLMLQAKLLRAIEAREILPIGASSPIQVDIRIISATNQNLAQF IAEGKFREDLFYRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYPGIAPDVVEI LRKHRWPGNLRELSNLMEYLVNVVPSGEVIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSL DDAGGTALEEMEKQMIREALSRHNSKKQVADELGIGIATLYRKIKKYELLNT >gi|299856449|gb|ADWV01000002.1| GENE 153 166537 - 167016 267 159 aa, chain - ## HITS:1 COG:ygeU KEGG:ns NR:ns ## COG: ygeU COG2080 # Protein_GI_number: 16130770 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs # Organism: Escherichia coli K12 # 1 159 1 159 159 295 100.0 2e-80 MNHSETITIECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGCCVGECGACTVLVDGTA IDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAK PREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK >gi|299856449|gb|ADWV01000002.1| GENE 154 167013 - 167891 632 292 aa, chain - ## HITS:1 COG:ygeT KEGG:ns NR:ns ## COG: ygeT COG1319 # Protein_GI_number: 16130769 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli K12 # 1 292 1 292 292 572 100.0 1e-163 MFDFASYHRAATLADAINLLADNPQAKLLAGGTDVLIQLHHHNDRYRHIVDIHNLAELRG ITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAATSIAGPQIRNVATYGGNICNGAT SADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSLEHDEILVAFHFPPQPKEHAG SAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFGVAAPTPIRCQHAEQTAQNAPLN LQTLEAISESVLQDVAPRSSWRASKEFRLHLIQTMTKKVISEAVAAAGGKLQ >gi|299856449|gb|ADWV01000002.1| GENE 155 167902 - 170199 1899 765 aa, chain - ## HITS:1 COG:ygeS KEGG:ns NR:ns ## COG: ygeS COG1529 # Protein_GI_number: 16130768 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli K12 # 14 765 1 752 752 1528 99.0 0 MEAREATATGESCMRVDAIAKVTGRARYTDDYVMAGMCYAKYVRSPIAHGYAVSINDEQA RSLPGVLAIFTWEDVPDIPFATAGHAWTLDENKRDTADRALLTRHVRHHGDAVAIVVARD ELTAEKAAQLVSIEWQELPVITTPEAALAEDAAPIHNGGNLLKQSTMSTGNVQQTIDAAD YQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSSTQIPHIVRRVVGQALDIPWSCVR VIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKVSLSREECFLATRTRHAFTIDGQMG VNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGNKVAYLYPRCAYAYSSKTCYTNLPSAG AMRGYGAPQVVFAVESMLDDAATALGIDPVEIRLRNAAREGDANPLTGKRIYSAGLPECL EKGRKIFEWEKRRAECQNQQGNLRRGVGVACFSYTSNTWPVGVEIAGARLLMNQDGTINV QSGATEIGQGADTVFSQMVAETVGVPVSDVRVISTQDTDVTPFDPGAFASRQSYVAAPAL RSAALLLKEKIIAHAAVMLHQSAMNLTLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERG GQLSAESSIKTTTNPPAFGCTFVDLTVDIALCKVIINRILNVHDSGHILNPLLAEGQVHG GMGMGIGWALFEEMIIDAKSGVVRNPNLLDYKMPTMPDLPQLESAFVEINEPQSAYGHKS LGEPPIIPVAAAIRNAVKMATGVAINTLPLTPKRLYEEFHLAGLI >gi|299856449|gb|ADWV01000002.1| GENE 156 170614 - 171369 373 251 aa, chain + ## HITS:1 COG:ygeR KEGG:ns NR:ns ## COG: ygeR COG0739 # Protein_GI_number: 16130767 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Escherichia coli K12 # 1 251 9 259 259 445 99.0 1e-125 MSAGRLNKKSLGIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTVKRGDTLYRISRTTGTS VKELARLNGISPPYTIEVGQKLKLGGAKSSSSTRKSTAKSTTKTASVTPSSAVPKSSWPP VGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYAAGAGKVVYVGNQLRGYGNLI MIKHSEDYITAYAHNDTMLVNNGQSVKAGQKIATMGSTDAASVRLHFQIRYRATAIDPLR YLPPQGSKPKC >gi|299856449|gb|ADWV01000002.1| GENE 157 172064 - 172363 195 99 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300815688|ref|ZP_07095912.1| ## NR: gi|300815688|ref|ZP_07095912.1| conserved domain protein [Escherichia coli MS 107-1] # 1 99 1 99 99 108 100.0 8e-23 MAISAKKAAYKEKKAKAAELAKLRRQQKAALTRMIKKAREDGTFDSLPDDIKAKCLKHEA KREKAAYFYNQWKEKQAYAARREEVAGIDELSLQHFKSI >gi|299856449|gb|ADWV01000002.1| GENE 158 175303 - 175491 302 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300815692|ref|ZP_07095916.1| ## NR: gi|300815692|ref|ZP_07095916.1| conserved hypothetical protein [Escherichia coli MS 107-1] # 1 62 1 62 62 95 100.0 8e-19 MKYFTSQDVVEAWKRGEINRFKVRMYRNTARRCGYPEREKCFDDALKIIDELRKAEKEAE KE >gi|299856449|gb|ADWV01000002.1| GENE 159 175514 - 175681 228 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300902712|ref|ZP_07120672.1| ## NR: gi|300902712|ref|ZP_07120672.1| conserved domain protein [Escherichia coli MS 84-1] # 1 55 1 55 55 84 100.0 1e-15 MSETKKPIPRTYLHVDPEIFKVLFAEAKKRQIMVSDLMLEIITEAAENIKQKKGK >gi|299856449|gb|ADWV01000002.1| GENE 160 175733 - 176425 311 230 aa, chain + ## HITS:1 COG:no KEGG:ECO26_0306 NR:ns ## KEGG: ECO26_0306 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 230 1 230 230 412 94.0 1e-114 MINQLTFTKHYDTFDNVSKIYSDKFPQGKDLDLLHIVLYFRFLSYQENNLNCYESHETLA KIFKSSASTIKRKINDLKEMGLLETSPHPDPYISSLIYNALPLTDAHITPPGESSLSDLS EAEEAQEQPKGHKQPSFDVLDDDWDTPLPWETEETPVSSSEKVANDNEEDVLENFASLII QEKTTRTGGASFIEFANSLAYRHGLKRPNGIEAYFSKHYPNVYEDFDIPF >gi|299856449|gb|ADWV01000002.1| GENE 161 176437 - 176715 155 92 aa, chain + ## HITS:1 COG:no KEGG:ECO26_0307 NR:ns ## KEGG: ECO26_0307 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 92 1 92 92 182 100.0 5e-45 MIQYLVKNQVDRIQCNDTGKRIYETLAYLYKGKPTPLKYSDVLHRAGCSEDGLKFWLKQL SNFGVIEIKELSFSTFNLKRLDKEIEFIYSTL >gi|299856449|gb|ADWV01000002.1| GENE 162 176846 - 177253 142 135 aa, chain + ## HITS:1 COG:no KEGG:ECO26_0308 NR:ns ## KEGG: ECO26_0308 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 135 1 136 136 266 98.0 2e-70 MAKRKNNVVKKIGDSASLLSKPKSILRRKDFKELVTLTKQNSAPGEWKTEIIEHSPSVPC GDEFNALQEILSSTPGVFWKPRKRKEYIVDSSDLRKYQILGFEDYNHYVGYLATNGLNNL VPEFQILDNADYGDF >gi|299856449|gb|ADWV01000002.1| GENE 163 177255 - 177593 256 112 aa, chain + ## HITS:1 COG:no KEGG:ECO26_0309 NR:ns ## KEGG: ECO26_0309 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 112 1 111 111 192 95.0 3e-48 MNKNTYDTIYSLINYYEDDYLLPLNRAELEAYKENTPAALNEAFKHWDLAVNAFSHLSKR VEMLCKSENAYLTADQIWELSNWIEDIESDVRYVGDGLVELAQRLGAAITEE >gi|299856449|gb|ADWV01000002.1| GENE 164 177943 - 178155 200 70 aa, chain + ## HITS:1 COG:no KEGG:ECO26_0310 NR:ns ## KEGG: ECO26_0310 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 70 1 70 70 98 98.0 7e-20 MLFLNDKEQIIKYKDEMLRINPQITEMVAKYAGCSVEEVERCVEKYFSPSSPSTPSLNEL IKLKAKEITK >gi|299856449|gb|ADWV01000002.1| GENE 165 178152 - 178514 213 120 aa, chain + ## HITS:1 COG:no KEGG:ECO26_0311 NR:ns ## KEGG: ECO26_0311 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 120 1 120 120 214 97.0 8e-55 MIIDLDTLFPVRKTFTDIVSYCTDPFASVESKVFASLPADVECGDLITSTGAKYESGDDI YVVMSEFVTAGENKPVDVLRSNAGLVCIKADALNAVSEAAKTALIKKGFQLEGFNTVFTS >gi|299856449|gb|ADWV01000002.1| GENE 166 178533 - 179561 796 342 aa, chain + ## HITS:1 COG:no KEGG:ECO26_0312 NR:ns ## KEGG: ECO26_0312 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 342 1 342 342 626 95.0 1e-178 MILGNDYVDLAPLFSAHSTRNYLLSTLDFTDSVGVTSHKVAVSQLVESNESLFNKETSRF SSEHNVTKREQGKEYLIEIPYFLRVDLIKPQDVQGKRKPGTDFQETLTDIYADYVAKHHV AYQRTKESVLAASLFSGKTYTPKTDDVLIEWGKLFNVSAMKATLNASSTDTTKIFKEFDQ IATDIIEKAQSQAAAVERIVVFCKPEAFSAIRFSAGMANAFQYVSPLEEGNVVYQRRDLL PGVTAFTIPGTNIDVIKLVDPLHLAHMTADAVAVPKFAKGSNVYQAIYGAASSTFELINA APAEVYSYSYESSRGDAVNVVTENSQMVVNHGVGFSVQITVK >gi|299856449|gb|ADWV01000002.1| GENE 167 179647 - 179847 188 66 aa, chain + ## HITS:1 COG:no KEGG:ECO26_0313 NR:ns ## KEGG: ECO26_0313 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 40 1 40 67 78 100.0 8e-14 MEVILKSKNGVHVHLDANDSRGLLNLKYLCSLLDVPYEGVGNDSNLLIVFYVQIMPDDFV MQLHRF >gi|299856449|gb|ADWV01000002.1| GENE 168 179782 - 180048 223 88 aa, chain - ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 88 80 167 167 171 100.0 3e-43 MATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARL GRKSLSFSKSVELHDKVIGHYLNIKHYQ >gi|299856449|gb|ADWV01000002.1| GENE 169 180231 - 180446 89 71 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E3230 NR:ns ## KEGG: SbBS512_E3230 # Name: not_defined # Def: putative IS1 encoded protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 35 71 1 37 37 64 94.0 1e-09 MAENRVEANAHNAGGCPASNAIHGHINDFLVRTGLRSGVSELQLPCFTAVRAEIALMSGG AFAVTHHPVSS >gi|299856449|gb|ADWV01000002.1| GENE 170 180642 - 182471 944 609 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1717 NR:ns ## KEGG: APECO1_1717 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 609 1 609 609 989 95.0 0 MLEINTSKIKNTVTFSVDKDSLKKAKDSITGLKEFAENIKPAKLRFDTVTKGYKKAQSEV DKIAQQKAKNEKQNQRAQAAAARAQARQQQQIAARKEKAELKLLDVGSSISAMHRLSVAE QYKAIAQAREIAKQYEQGAISLARMNSQMKRLQQQQRKINGNRKAQLAPVKGGSGNSATM GALLFGGATAAAGVMAVSKTAEFVSKSFANAETQGELIQRARLGGVDVNQMYNITEWAYK NGVDSMMGDQGARKYLDQMKDVRERATKSYDEAEYVVDKKTGKGIWKGGDNGINELLNIG VINKSDLKKFADNPAGLISKAVNGMMKKGFSDSQIGQRLEDLGDDLMLTSKYWQRSVKDV QESINQQKASGKWLTETQQDSIVKFRELNRQLSQLSDARQVAFVDGFMKSLDPKVTEEFL KNLSNLTPYFTKLGEATGSLFEAIMKIVNWFNRNDDKTEAIQKNLGDAPPLSNEGMKQNL SNLVPDQYKGAGTATTTPDNSHSLFNTIKGLLFDDKSSVSDVKMSVNEAPITNLKQGALN NLAMTTPAYNLSPVFNLNPTFEVVTEVPLTINSDTSRLSDYVDFTARASRDSFLKSLTLT SLSGQSNGG >gi|299856449|gb|ADWV01000002.1| GENE 171 182506 - 183219 385 237 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1716 NR:ns ## KEGG: APECO1_1716 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 237 1 237 237 386 94.0 1e-106 MATAGILTIRAANTPEQHVQAVYKAEQDINSTKNENSKANKAKGENGFAIVTSGLASSGN DVYENYMALAFDSVDDVNVKRQADVTSYPVENGATVSDHVQIKNNKFSLKGRISETPIKS DPGLLKSAGVNGNRRSLAIDYLNQIMDSRQPFLLVTENKTFENVVLTGIEYTEEASESLV FDLEFEQIRLVSYATVNTVALKTQASKNIGVRTKKRVNTEDQSSEGEDTITPAFKQE >gi|299856449|gb|ADWV01000002.1| GENE 172 183314 - 183928 188 204 aa, chain - ## HITS:1 COG:no KEGG:ECL_04197 NR:ns ## KEGG: ECL_04197 # Name: not_defined # Def: putative integrase # Organism: E.cloacae # Pathway: not_defined # 1 196 204 399 416 280 70.0 3e-74 MEARRTIESYQPFTPEQMQKLLDAAEPEIRNIILMGLFSGCRLDELASLKKSEVVTVEGI RCFYISKSKTKAGIRHVPIHSKLSVIVDEYLKHSYGEYLFPQANKIKRIDGKKGPFYSQA FSRLRRSVLPTATERQCFHSLRGMFITCLDRAGVQETRIGAITGHTEQKAKTEAFRTYSQ GASIQELAEYVELVRYELNIDFKA >gi|299856449|gb|ADWV01000002.1| GENE 173 184875 - 186485 601 536 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_2983 NR:ns ## KEGG: ECIAI1_2983 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 536 15 550 550 1050 99.0 0 MKGKSALTLLLAGIFSCGTCQATGAEVTSESVFNILNSTGAATDKSYLSLNPDKYPNYRL LIHSAKLQNEIKSHYTKDEIQGLLTLTENTRKLTLTEKPWGTFILASTFEDDKTAAETHY DAVWLRDSLWGYMALVSDQGNSVAAKKVLLTLWDYMSTPDQIKRMQDVISNPKRLDGVPG QMNVVHIRFDSNSPVMADVQEEGKPQLWNHKQNDALGLYLDLLIQAIDTDTINAEDWQKG DRLKSVALLIAYLDKANFYVMKDSGAWEEDARLNTSSVALVTSGLERLSNLLSKKDSVFV SDLLREAKANELDEPLSTTRLNHLIDKGYERITLQLDLGGESPGYLEKDKHYREADAALL NVIYPANLAKINTRRKEQVLKIVKKLAGPYGIKRYEKDNYQSANFWFNDIKTDTDQNSHA KREKSFIPSTEAEWFFDSWYAKSAAIVYKESRKEEYLNDSVQFMNRSLAQITGENMIGAN GRSVPEMALPESYNYIHKSGTLHEAPSPIIPLNWSKASMTLMLKEMSNLINDEGIK >gi|299856449|gb|ADWV01000002.1| GENE 174 187223 - 187564 364 113 aa, chain + ## HITS:1 COG:ECs3726 KEGG:ns NR:ns ## COG: ECs3726 COG1886 # Protein_GI_number: 15832980 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar motor switch/type III secretory pathway protein # Organism: Escherichia coli O157:H7 # 1 113 216 328 328 209 95.0 7e-55 MADHFEYEEDFETDDFDIKKNESEIYDENDEQMINSFEELPVKIEFVLGKKIINLYEIDD LCAKRIISLLPESEKNIEIRVNGALTGYGELVEVDDKLGVEIHSWLSGNNNVK >gi|299856449|gb|ADWV01000002.1| GENE 175 187554 - 188219 118 221 aa, chain + ## HITS:1 COG:ECs3725 KEGG:ns NR:ns ## COG: ECs3725 COG4790 # Protein_GI_number: 15832979 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type III secretory pathway, component EscR # Organism: Escherichia coli O157:H7 # 1 221 1 221 221 351 99.0 7e-97 MSNSISLIAILSLFTLLPFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLS MFVMMPVGKEIYNNSQNENLSFNNVASVVNFVETGMSGYKSYLIKYSEPELVSFFEKIQK VNSSEDNEEIIDDDNISIFSLLPAYALSEIKSAFIIGFYIYLPFVVVDLVISSVLLTLGM MMMSPVTISTPIKLILFVAMDGWTMLSKGLILQYFDLSINP >gi|299856449|gb|ADWV01000002.1| GENE 176 188229 - 188414 139 61 aa, chain + ## HITS:1 COG:ECs3724 KEGG:ns NR:ns ## COG: ECs3724 COG4794 # Protein_GI_number: 15832978 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type III secretory pathway, component EscS # Organism: Escherichia coli O157:H7 # 1 61 1 61 86 103 100.0 8e-23 MDDIVFAGNRALYLILVMSAGPIAVATFVGLLVGLFQTVTQLQEQTLPFGVKLLCVSICF F >gi|299856449|gb|ADWV01000002.1| GENE 177 188490 - 189257 214 255 aa, chain + ## HITS:1 COG:ECs3723 KEGG:ns NR:ns ## COG: ECs3723 COG4791 # Protein_GI_number: 15832977 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type III secretory pathway, component EscT # Organism: Escherichia coli O157:H7 # 1 150 6 155 155 263 96.0 2e-70 MGEAILYQLHSLLAATALGFCRLAPTFYLLPFFASGNIPTVVRHPIIIVVSCALVQHYHY ELLNLNEIDIALFAAREIIIGLFIACLLASPFWIFLAIGSFIDNQRGATLSSTLDPATGV DTSELARLFNLFSAAVYLTKGGMNFILETLWQSYNLWPSGNFNFPKLEPLFSYINNIMTH TIVYASPVIAVMLGGEAVLGLLARYASQLNAFAISLTIKSALAFLILIIYFAPILAERVM PLSFFPEQLQLYIEK >gi|299856449|gb|ADWV01000002.1| GENE 178 189266 - 189997 264 243 aa, chain + ## HITS:1 COG:ECs3721 KEGG:ns NR:ns ## COG: ECs3721 COG1377 # Protein_GI_number: 15832975 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Escherichia coli O157:H7 # 1 235 1 235 373 448 97.0 1e-126 MANKTEKPTQKKLQDASKKGQILKSRDLTISVIMLVGTLYLGYVFDVHHIMSILEYILDH NAKPDIWDYFKAMGVGWLKTNIPFLLVCMFTTILVSWFQSKMQLATEAVKFKFDSLNPVN GLKRIFGLKTVKEFVKAILYIVFFALAIKVFWSNHKSLLFKTLDGDIISLLSDWGEMLFL LILYCLGSMIIVLIFDFIAEYFLFMKDMKMDKQEVKREYKEQEGNPEIKSKRRERIRKFF LSN >gi|299856449|gb|ADWV01000002.1| GENE 179 190024 - 190386 209 120 aa, chain + ## HITS:1 COG:ECs3721 KEGG:ns NR:ns ## COG: ECs3721 COG1377 # Protein_GI_number: 15832975 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Escherichia coli O157:H7 # 1 120 254 373 373 222 92.0 1e-58 MISNPTHIAIGIYFKPHLSPIPLISVRVTNEVALGVRKYAKEIGIPIITDKKLARKNYAT HRRYDYVSFENIDEILRLLLWLEDVENAGQPVQDEQLSSEDKFIEGEDTKIENKDDNLKN >gi|299856449|gb|ADWV01000002.1| GENE 180 190447 - 190740 65 97 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3142 NR:ns ## KEGG: EC55989_3142 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 97 1 97 97 162 97.0 3e-39 MSLVGYNSNIIITIALISLLSACTRENSLKENQNKRSGESQAIVDARQFFSEHPEYISSA ELEQKLYREFAQVTTVPAYKEMSMYQLLIISQDRLTH >gi|299856449|gb|ADWV01000002.1| GENE 181 190742 - 191242 193 166 aa, chain - ## HITS:1 COG:ECs3720 KEGG:ns NR:ns ## COG: ECs3720 COG2771 # Protein_GI_number: 15832974 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 166 1 166 166 304 96.0 4e-83 MQVFSSDVYFTVGTNALLASQKEYYSDLVALVDLGHSFVVIDEHQHRNLNPNTEPVNILL SNNFIRINKNITLSDLTHFLISNLHTQNVYSTQEPLTHDEIDILRLCVSYSLKQIAIIKG IDYKTISYHKIRALNKLNIKGTVELFIALCEWDKHYFKLQSCVRES >gi|299856449|gb|ADWV01000002.1| GENE 182 191500 - 192681 388 393 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_3179 NR:ns ## KEGG: EcE24377A_3179 # Name: eprH # Def: type III secretion apparatus protein EprH # Organism: E.coli_E24377A # Pathway: not_defined # 1 393 1 393 393 741 100.0 0 MENNDKFLSQELLESYAIRLLSGPLNGCEYEILNGRLLVIIGNDVSLGRSDAFSELPENT IVVPYGELTGSFEIIITTDHDLVVTFRELTAQEPEDRTLTLNQQIEVLGLKFAVKEKNEV WQYSLPGIIENNIISTKQHFFSSKLFKYVMLFFLFAIIFIAFYIVNASNDPQLRHIDKIL VNKNRNYEILYGRDHVIYINTNILDEAVWVKQALEKNQPGKPVRVINPDDESIRIFSWLA DNFPDLQYFKLQLLDASNLRLTVSKQRNAITQQLIDNLIKGLLQTMPYASNISIAVLDDN VLESQAIETLSAIGLSYEKYKTANNVYFNIIGTLSDSELNKINNYVDEYYKQWGKQYVRF NVNLKNQDTNNSSFSYGDNRFEKSQGSNWTFQE >gi|299856449|gb|ADWV01000002.1| GENE 183 192695 - 192850 101 51 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3423 NR:ns ## KEGG: ECO103_3423 # Name: not_defined # Def: type III secretion protein EprI # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 51 1 51 51 89 100.0 4e-17 MADWNGYIMDISNQFDQGVDDLNQQVEKALEDLANQSLRHEISCRISKCIS >gi|299856449|gb|ADWV01000002.1| GENE 184 193027 - 193242 91 71 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_3189 NR:ns ## KEGG: ECUMN_3189 # Name: not_defined # Def: conserved hypothetical protein, putative type III secretion apparatus protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 69 25 93 110 120 97.0 2e-26 MIDLNDRVLNLDNPDDKMISAFANYAVQTENWQQNALQALRSDKEGLTPEKLLVLQDHVL NYNVEVSLVEH >gi|299856449|gb|ADWV01000002.1| GENE 185 193283 - 194017 11 244 aa, chain + ## HITS:1 COG:ECs3716 KEGG:ns NR:ns ## COG: ECs3716 COG4669 # Protein_GI_number: 15832970 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type III secretory pathway, lipoprotein EscJ # Organism: Escherichia coli O157:H7 # 1 244 1 244 244 450 98.0 1e-126 MKYISLLLFILLLCGCKQQELLNHLDQQQANDVLAVLQRHNINAEKKDQGKTGFSIFVEP TDFASAVDWLKIYNLPGKPDIQISQMFPADALVSSPRAEKARLYSAIEQRLEQSLKIMDG IISSRVHVSYDVDNGDSGKTALPIHISVLAVYEKDINPEIKINDIKRFIVNSSASVQYEN ISVVLSKRRDIIEQAPTYEISEPVFAYDKAMPVSILLALISVATCWLLWKYRAILTNLVR LKIK >gi|299856449|gb|ADWV01000002.1| GENE 186 194033 - 194614 -96 193 aa, chain + ## HITS:1 COG:no KEGG:ECSE_3117 NR:ns ## KEGG: ECSE_3117 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 193 1 193 193 376 100.0 1e-103 MNLALRKIIYDPISYIHPQRVSLNNTPINNPVLRSITNEMIVLQYNLSVEYFNLNSSLIY YINNWNLFPLFCLFSGYHFYRERFAERGFFYKVPAVLRDYLSAIPVKINEKARYKPGIAS YHNIITCGFSTLSPYIRQQPLAMQQRFNLLFPDFVDHIQLPLPLASTLLERITFYAKKNR DELDKISCKWCCD >gi|299856449|gb|ADWV01000002.1| GENE 187 194831 - 195262 82 143 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3135 NR:ns ## KEGG: EC55989_3135 # Name: ygeM # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 143 1 143 143 268 99.0 4e-71 MINDLKSILLKSSEEVDVFIKIFESWRKKLPAISGPVNLYIPTIFKDKYLEVESYFVDKS IWNVHITFHDDKRFVFFTDQFIAEFSPQEFVDNCEQYLINNHCFSPDKVNEICEQARHYL VEKMFETHSLDMNNSVLASPEDL >gi|299856449|gb|ADWV01000002.1| GENE 188 195483 - 195638 132 51 aa, chain + ## HITS:1 COG:ECs3712 KEGG:ns NR:ns ## COG: ECs3712 COG2197 # Protein_GI_number: 15832966 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 51 1 51 210 104 96.0 3e-23 MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKSIAECNKSTA >gi|299856449|gb|ADWV01000002.1| GENE 189 195672 - 196115 84 147 aa, chain + ## HITS:1 COG:ECs3712 KEGG:ns NR:ns ## COG: ECs3712 COG2197 # Protein_GI_number: 15832966 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 147 64 210 210 295 99.0 2e-80 MGSELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPAKLNRAIDSISN GYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADGKTNKEIANFLQLSRKTVETHR LNIMKKLDVHSGIELIKTALRMGVCTI >gi|299856449|gb|ADWV01000002.1| GENE 190 196160 - 196396 88 78 aa, chain - ## HITS:1 COG:pbl KEGG:ns NR:ns ## COG: pbl COG0741 # Protein_GI_number: 16130758 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli K12 # 1 78 61 138 138 167 100.0 4e-42 MHIPLLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQK KRQQYAPKYILYIPGLMN >gi|299856449|gb|ADWV01000002.1| GENE 191 196434 - 196652 138 72 aa, chain + ## HITS:1 COG:no KEGG:ECSE_3112 NR:ns ## KEGG: ECSE_3112 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 72 1 72 72 97 100.0 1e-19 MLLFLSLFLPMLSFFRLLSTRAIALIKFGSILNIVPASLEQELLAKDIFVINIQNVKMVK NLTFGERIFFHV >gi|299856449|gb|ADWV01000002.1| GENE 192 196719 - 196937 176 72 aa, chain - ## HITS:1 COG:no KEGG:JW5456 NR:ns ## KEGG: JW5456 # Name: ygeI # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 72 1 72 72 120 100.0 2e-26 MTNPIGINNLSQSSNIANATGDEVVSLDKHINTSATDTDQIQAFIVSTWMAPFQNDMYSE DNPISPYYKIEW >gi|299856449|gb|ADWV01000002.1| GENE 193 197105 - 198481 210 458 aa, chain - ## HITS:1 COG:ygeH_2 KEGG:ns NR:ns ## COG: ygeH_2 COG0457 # Protein_GI_number: 16130756 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Escherichia coli K12 # 114 458 1 345 345 676 100.0 0 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI AIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPD YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHIL FEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP NPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR >gi|299856449|gb|ADWV01000002.1| GENE 194 198816 - 199307 265 163 aa, chain - ## HITS:1 COG:ygeG KEGG:ns NR:ns ## COG: ygeG COG0457 # Protein_GI_number: 16130755 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Escherichia coli K12 # 1 163 1 163 163 289 98.0 1e-78 MSTETIEIFNNSDEWANQLKHALSKEENLALLHGLTPDILDRIYAYAFDYHEKGNITDAE IYYKFLCIYAFENHEYLKDFASVCQPKKKYQQAYDLYKLSYNYSPYDDYSVIYRMGQCQI GAKNIDNAMQCFYHIINNCEDDSVKSKAQAYIELLNDNSEDNG >gi|299856449|gb|ADWV01000002.1| GENE 195 200216 - 200641 121 141 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_3178 NR:ns ## KEGG: ECUMN_3178 # Name: yqeK # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 141 1 141 141 222 97.0 4e-57 MDIEFSQIDEMVYMHDIVNSDSKKKPRIPLKKFLNAEKVLTQTTSWALNSRFVNVNSVNK VNVKSKVKSSYISRSVNDEFSLTDDEINSFKETLVLSSIDSLSKLVLNNPLSVLFTSTVR RNNNRAKMNVEFDSWICTRCC >gi|299856449|gb|ADWV01000002.1| GENE 196 201264 - 201599 174 111 aa, chain - ## HITS:1 COG:yqeI KEGG:ns NR:ns ## COG: yqeI COG3710 # Protein_GI_number: 16130751 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Escherichia coli K12 # 1 111 159 269 269 238 99.0 2e-63 MLSAFVIGAYSAYWLWNNNQPKPFFKDYKTVAEINGCHFNVTEDTIDGLKEFDKYKTRIL DSGINCKKHPWLYFPLAKSSPGMIVMACNKNYNQHEVADCLTLSYREVNRD >gi|299856449|gb|ADWV01000002.1| GENE 197 202407 - 202925 143 172 aa, chain - ## HITS:1 COG:yqeH KEGG:ns NR:ns ## COG: yqeH COG2771 # Protein_GI_number: 16130750 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli K12 # 1 172 59 230 230 342 98.0 2e-94 MWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLFLEKDWIDYLASTDMGIVL VSDRNMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFT IMGYMVSGYNPYQIAEVLDINIRSIYAYKQRIEKRMGGKINELFIRSHSVQH >gi|299856449|gb|ADWV01000002.1| GENE 198 203499 - 204728 582 409 aa, chain - ## HITS:1 COG:ECs3702 KEGG:ns NR:ns ## COG: ECs3702 COG0814 # Protein_GI_number: 15832956 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 409 1 409 409 707 100.0 0 MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQ FILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHM VIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPLIAYFLFLSIYLVGSWQPDLL TTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDRREKYGEHAMDKCKKIMKVAYLI ICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALSMLPNAPAWLSISGIIVAVVAMSKS FLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRALSIMLVSLITFIVCCINPNAISMIYA ISGPLIAMILFIMPTLSTYLIPALKPWRSIGNLITLIVGILCVSVMFFS >gi|299856449|gb|ADWV01000002.1| GENE 199 204983 - 206164 1049 393 aa, chain + ## HITS:1 COG:ECs3701 KEGG:ns NR:ns ## COG: ECs3701 COG0183 # Protein_GI_number: 15832955 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli O157:H7 # 1 393 2 394 394 717 99.0 0 MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTSVPAYAVDEVILGQVLTAG AGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAIQCGEADIVIAGGQENMSR APHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVTAENLAREYGISRQLQDAYAL SSQQKARAAIDAGRFKDEIVPVMTQSNGQTLVVDTDEQPRTDASAEGLARLNPSFDSLGS VTAGNASSINDGAAAVMMMSEAKARALNLPVLARIRAFASVGVDPALMGIAPVYATRRCL ERVGWQLADVDLIEANEAFAAQALSVGKMLEWDERRVNVNGGAIALGHPIGASGCRILVS LVHEMVKRNARKGLATLCIGGGQGVALTIERDE >gi|299856449|gb|ADWV01000002.1| GENE 200 206559 - 207287 665 242 aa, chain + ## HITS:1 COG:kduI KEGG:ns NR:ns ## COG: kduI COG3717 # Protein_GI_number: 16130747 # Func_class: G Carbohydrate transport and metabolism # Function: 5-keto 4-deoxyuronate isomerase # Organism: Escherichia coli K12 # 1 242 37 278 278 510 99.0 1e-144 MVYSHIDRIIVGGIMPITKTVSVGGEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCY EIGHRDALYVGKGAKEVVFASIDTATPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNL TSNRRTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACV FHMMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKD LR >gi|299856449|gb|ADWV01000002.1| GENE 201 207317 - 208078 766 253 aa, chain + ## HITS:1 COG:kduD KEGG:ns NR:ns ## COG: kduD COG1028 # Protein_GI_number: 16130746 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 253 1 253 253 493 99.0 1e-139 MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRFL SLTADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSV FFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHN INVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYVN GYTIAVDGGWLAR >gi|299856449|gb|ADWV01000002.1| GENE 202 208446 - 209804 1424 452 aa, chain + ## HITS:1 COG:ECs3698 KEGG:ns NR:ns ## COG: ECs3698 COG0477 # Protein_GI_number: 15832952 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 452 21 472 472 817 100.0 0 MNMFVSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNG WLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEM ASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPN SPRWLAEKGRHIEAEEVLRMLRDTSEKAREELNEIRESLKLKQGGWALFKINRNVRRAVF LGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDK AGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVV WILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFVG ITFWLIPETKNVTLEHIERKLMAGEKLRNIGV >gi|299856449|gb|ADWV01000002.1| GENE 203 209933 - 210625 758 230 aa, chain + ## HITS:1 COG:ECs3697 KEGG:ns NR:ns ## COG: ECs3697 COG1794 # Protein_GI_number: 15832951 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Escherichia coli O157:H7 # 1 230 1 230 230 456 99.0 1e-128 MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVDFHEIEECQRRGEWDKT GDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFLHIADATGRAITGAGMTRV ALLGTRYTMEQDFYRGRLMEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ VIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAAIHAEDAVAFMLS >gi|299856449|gb|ADWV01000002.1| GENE 204 210612 - 211547 821 311 aa, chain - ## HITS:1 COG:lysR KEGG:ns NR:ns ## COG: lysR COG0583 # Protein_GI_number: 16130743 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 311 1 311 311 575 99.0 1e-164 MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHP TVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPQLLQPFLARY PDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTELLSLDEVCVLPPGHPLAV KKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVETHSAASVCAMVRAGVGV SVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQAFSEHLQAGLPKLVTS LDAILSSATTA >gi|299856449|gb|ADWV01000002.1| GENE 205 211669 - 212931 1263 420 aa, chain + ## HITS:1 COG:lysA KEGG:ns NR:ns ## COG: lysA COG0019 # Protein_GI_number: 16130742 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Escherichia coli K12 # 1 411 1 411 420 830 99.0 0 MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIH ILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVN AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR HHLQLVGIHMHIGSGVDYAHLEQVCVAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVD TEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDA GFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRA LPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELL >gi|299856449|gb|ADWV01000002.1| GENE 206 212938 - 213969 923 343 aa, chain - ## HITS:1 COG:galR KEGG:ns NR:ns ## COG: galR COG1609 # Protein_GI_number: 16130741 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 343 1 343 343 658 99.0 0 MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTE TVGLIVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV VHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIG YLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTA VACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA ELALALADNRPLPEITNVFSPTLVRRHSVSTPSLEASHHATSD >gi|299856449|gb|ADWV01000002.1| GENE 207 214555 - 216714 2000 719 aa, chain + ## HITS:1 COG:ECs3693_2 KEGG:ns NR:ns ## COG: ECs3693_2 COG0318 # Protein_GI_number: 15832947 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 196 719 1 524 524 1063 99.0 0 MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTS ISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDG AGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVEMPDAPRARD RRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTK TLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRIPAMMNYTAGVKGLTSAITA AEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQV KQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFG LTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYR LRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGM DARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVR FDELGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFT TDNELTRDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE >gi|299856449|gb|ADWV01000002.1| GENE 208 216707 - 217900 1387 397 aa, chain + ## HITS:1 COG:ygeD KEGG:ns NR:ns ## COG: ygeD COG0477 # Protein_GI_number: 16130739 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 397 1 397 397 642 100.0 0 MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVG AYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAK YGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVA NIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLV LWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFS LQHELLPAYALLMLIGVMGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLG IYSLAVMIGIPVVPIGIGFGALFALAITALWIWQRRH >gi|299856449|gb|ADWV01000002.1| GENE 209 217932 - 218972 1158 346 aa, chain - ## HITS:1 COG:tas KEGG:ns NR:ns ## COG: tas COG0667 # Protein_GI_number: 16130738 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 346 1 346 346 699 100.0 0 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN ETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGT LTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQP FVASTLLGATTMDQLKTNIESLHLELSEDVLAEIEAVHQVYTYPAP >gi|299856449|gb|ADWV01000002.1| GENE 210 219080 - 219298 287 72 aa, chain - ## HITS:1 COG:no KEGG:G2583_3488 NR:ns ## KEGG: G2583_3488 # Name: ygdR # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 72 1 72 72 132 100.0 4e-30 MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDDDTGLVSYHDQQGNAMQ INRDDVSQIIER >gi|299856449|gb|ADWV01000002.1| GENE 211 219436 - 220149 797 237 aa, chain - ## HITS:1 COG:ECs3689 KEGG:ns NR:ns ## COG: ECs3689 COG0861 # Protein_GI_number: 15832943 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 237 1 237 237 381 100.0 1e-106 MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMR LALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESIEGEEEGLKT RVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGDFVE RHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLNLIRNKKNPL >gi|299856449|gb|ADWV01000002.1| GENE 212 220218 - 220907 689 229 aa, chain - ## HITS:1 COG:ECs3688 KEGG:ns NR:ns ## COG: ECs3688 COG3066 # Protein_GI_number: 15832942 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair protein # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 432 100.0 1e-121 MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALAGLVTPENLKRDKGWIGVLLEIWLG ASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRV LWIPVEGERSIPLAQRRVGSPLLWSPNEEEDRQLREDWEELMDMIVLGQVERITARHGEY LQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFTSALLARHFLIQ >gi|299856449|gb|ADWV01000002.1| GENE 213 221093 - 221239 64 48 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3390 NR:ns ## KEGG: ECO103_3390 # Name: ygdT # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 48 1 48 48 95 100.0 5e-19 MLSTESWDNCEKPPLLFPFTALTCDETPVFSGSVLNLVAHSVDKYGIG >gi|299856449|gb|ADWV01000002.1| GENE 214 221592 - 222122 268 176 aa, chain + ## HITS:1 COG:ECs3687 KEGG:ns NR:ns ## COG: ECs3687 COG0494 # Protein_GI_number: 15832941 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 340 100.0 1e-93 MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPE FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG >gi|299856449|gb|ADWV01000002.1| GENE 215 222135 - 224381 2148 748 aa, chain + ## HITS:1 COG:ECs3686 KEGG:ns NR:ns ## COG: ECs3686 COG3605 # Protein_GI_number: 15832940 # Func_class: T Signal transduction mechanisms # Function: Signal transduction protein containing GAF and PtsI domains # Organism: Escherichia coli O157:H7 # 1 748 1 748 748 1434 100.0 0 MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKK PRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQ LLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLTALFGQYRQTRIRALPAAPGV AIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAA IFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVIEKFAEQFAALSDNYLKERAGDLRA LGQRLLFHLDDANQGPNAWPERFILVADELSATTLAELPQDRLVGVVVRDGAANSHAAIM VRALGIPTVMGADIQPSVLHRRTLIVDGYRGELLVDPEPVLLQEYQRLISEEIELSRLAE DDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQV AQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVR AMLRANAATGNLNILLPMVTSLDEVDEARRLIERAGREVEEMIGYEIPKPRIGIMLEVPS MVFMLPHLAKRVDFISVGTNDLTQYILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEI HGIDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARVKYLLRRIDYAEAENLAQRSLE AQLATEVRHQVAAFMERRGMGGLIRGGL >gi|299856449|gb|ADWV01000002.1| GENE 216 224532 - 225407 1149 291 aa, chain + ## HITS:1 COG:ECs3685 KEGG:ns NR:ns ## COG: ECs3685 COG0682 # Protein_GI_number: 15832939 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Escherichia coli O157:H7 # 1 291 1 291 291 548 100.0 1e-156 MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRRANRPGSGWTKNEVENL LYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSFHGGLIGVIVVMIIFARRT KRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNFPFAMLFPGSRTEDILLLQTN PQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYIRKPRPMGAVSGLFLIGYGAFRI IVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVIMMVWAYRRSPQQHVS >gi|299856449|gb|ADWV01000002.1| GENE 217 225435 - 226208 837 257 aa, chain + ## HITS:1 COG:ECs3684 KEGG:ns NR:ns ## COG: ECs3684 COG0207 # Protein_GI_number: 15832938 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Escherichia coli O157:H7 # 1 257 8 264 264 553 100.0 1e-158 MQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDT NIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRR IIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHM MAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDF EIEGYDPHPGIKAPVAI >gi|299856449|gb|ADWV01000002.1| GENE 218 226392 - 226862 237 156 aa, chain + ## HITS:1 COG:ppdA KEGG:ns NR:ns ## COG: ppdA COG2165 # Protein_GI_number: 16130730 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Escherichia coli K12 # 1 156 1 156 156 293 100.0 8e-80 MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWH NRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTA WAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL >gi|299856449|gb|ADWV01000002.1| GENE 219 226853 - 227416 626 187 aa, chain + ## HITS:1 COG:ppdB KEGG:ns NR:ns ## COG: ppdB COG4795 # Protein_GI_number: 16130729 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulJ # Organism: Escherichia coli K12 # 1 187 1 187 187 376 98.0 1e-104 MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRKLALEDEIWLRVFTVAK HLQRAGYCHGSCTGEGLEIVGQGDCIIVQWDANSNGIWDREPVKESDQIGFRLKEHVLET LRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVLTVNMRAASKSEPQTVVDASY SVTGFNL >gi|299856449|gb|ADWV01000002.1| GENE 220 227413 - 227820 218 135 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3100 NR:ns ## KEGG: EC55989_3100 # Name: ygdB # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 135 1 135 135 223 100.0 1e-57 MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQSLRRQAIVQSALAWGKM HSWQTQPAVQCSQYAGTDARVCLRLLADNEALLVAGYEGVSLWRTGEVIDGNIVFSPRGW SDFCPLKERALCQLP >gi|299856449|gb|ADWV01000002.1| GENE 221 227805 - 228128 111 107 aa, chain + ## HITS:1 COG:ppdC KEGG:ns NR:ns ## COG: ppdC COG4967 # Protein_GI_number: 16130727 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilV # Organism: Escherichia coli K12 # 1 107 1 107 107 179 98.0 2e-45 MSASLKNQQGFSLPEVMVAMVLMVMIVTALSGIQRTLMNSLASRNQYQQLWRHGWQQTQL RAISPPANWQVNRMQTSQAGCVSISVTLVSPGGREGEMTRLHCPNRQ >gi|299856449|gb|ADWV01000002.1| GENE 222 228141 - 231509 3090 1122 aa, chain + ## HITS:1 COG:recC KEGG:ns NR:ns ## COG: recC COG1330 # Protein_GI_number: 16130726 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Escherichia coli K12 # 1 1122 1 1122 1122 2221 99.0 0 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLDREDFTLLRHYLTDDSD KRKLFQLSSKAADLFDQYLVYRPEWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHELG QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPTTGQHTWRFGLTRMLLGYAMESA QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS >gi|299856449|gb|ADWV01000002.1| GENE 223 231685 - 234573 2906 962 aa, chain + ## HITS:1 COG:ECs3678 KEGG:ns NR:ns ## COG: ECs3678 COG1025 # Protein_GI_number: 15832932 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Secreted/periplasmic Zn-dependent peptidases, insulinase-like # Organism: Escherichia coli O157:H7 # 1 962 1 962 962 1854 99.0 0 MPRSTWFKALLLFVALWAPLSQAETGWQPIQETIRKSDKDNRQYQAIRLDNGMVVLLVSD PQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNA STAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMR MAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKP LPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNS AKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIVNGNSGVLAISASLTDK GLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMI RVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAYFVDAPYQVDK ISEQTFADWQQKAANIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSR YFSSEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNANN GLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMP AQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDV QKQLGADGSEWCRNKDVVVDKKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLG QIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAE AKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLL TPQKLADFFHQAVVEPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEK NE >gi|299856449|gb|ADWV01000002.1| GENE 224 234566 - 238108 3091 1180 aa, chain + ## HITS:1 COG:ECs3677 KEGG:ns NR:ns ## COG: ECs3677 COG1074 # Protein_GI_number: 15832931 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Escherichia coli O157:H7 # 1 1180 1 1180 1180 2270 98.0 0 MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL VVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQ MDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREIA LVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAV GELDALIESSGIDRRKFNRSNQAKWIEKISAWAEEETNSYQLPESLEKFSQRFLEDRTKA GGETPRHPLFEAIEQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSRLDS ALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIY AFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKS AGKNQALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALL MNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLL QAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDVVVEEFDGYRQIWRKRGVMPM LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDS NASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDL NAAPESVDLAEVERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGR LLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDN WRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFE DLDFTQPVDPNWVQEKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSDRDKQVE MEFYLPISEPLIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLD YKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDRHFGGVIY LFLRGVDKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA >gi|299856449|gb|ADWV01000002.1| GENE 225 238108 - 239934 1393 608 aa, chain + ## HITS:1 COG:recD KEGG:ns NR:ns ## COG: recD COG0507 # Protein_GI_number: 16130723 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Escherichia coli K12 # 1 608 1 608 608 1161 99.0 0 MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLEN NEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVA RFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTT VAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTL HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQ LASVEAGAVLGDICAYANAGFTAERAGQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYR FGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLD LLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGR PVMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHK SQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGL AALFSSRE >gi|299856449|gb|ADWV01000002.1| GENE 226 239996 - 241327 1354 443 aa, chain - ## HITS:1 COG:ECs3675_1 KEGG:ns NR:ns ## COG: ECs3675_1 COG0548 # Protein_GI_number: 15832929 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Escherichia coli O157:H7 # 1 291 1 291 291 581 100.0 1e-166 MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSSIVNDIGLLHSLGIRLV VVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAGTLQLDITARLSMSLNNTP LQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDAIHRQLDSGAIVLMGPVAVSV TGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDDGDIVSELFPNEAQARVEAQEEK GDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGALLQELFSRDGIGTQIVMESAEQIRR ATINDIGGILELIRPLEQQGILVRRSREQLEMEIDKFTIIQRDNTTIACAALYPFPEEKI GEMACVAVHPDYRSSSRGEVLLERITAQAKQSGLSKLFVLTTRSIHWFQERGFTPVDIDL LPESKKQLYNYQRKSKVLMADLG >gi|299856449|gb|ADWV01000002.1| GENE 227 241559 - 242812 1274 417 aa, chain + ## HITS:1 COG:ECs3674 KEGG:ns NR:ns ## COG: ECs3674 COG0860 # Protein_GI_number: 15832928 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 417 31 447 447 783 100.0 0 MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPASSYTRVTVESNRQLKY KQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSARVGQFDPQTVRMVFELKQN VKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLEDYNKGDLEKQVPPAQSGPQPG KAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIEKEGNMKVYMTRNE DIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQN ASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKINKLHKNQVEQAGFA VLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAYFADGATLARRG >gi|299856449|gb|ADWV01000002.1| GENE 228 243392 - 244489 1176 365 aa, chain + ## HITS:1 COG:ECs3673 KEGG:ns NR:ns ## COG: ECs3673 COG2821 # Protein_GI_number: 15832927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase # Organism: Escherichia coli O157:H7 # 1 365 1 365 365 740 100.0 0 MKGRWVKYLLMGTVVAMLAACSSKPTDRGQQYKDGKFTQPFSLVNQPDAVGAPINAGDFA EQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGIDAWQMEGADNYGNVQFTG YYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGALSDKYILAYSNSLMDNFIMD VQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDRGEVKKEDMSMQAIRHWGETHSE AEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRASVASDRSIIPPGTTLLAEVPLLDN NGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIGPEAGHRAGWYNHYGRVWVLKTAPGAG NVFSG >gi|299856449|gb|ADWV01000002.1| GENE 229 244566 - 245372 868 268 aa, chain + ## HITS:1 COG:ygdL KEGG:ns NR:ns ## COG: ygdL COG1179 # Protein_GI_number: 16130719 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Escherichia coli K12 # 1 268 1 268 268 515 100.0 1e-146 MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLI DMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSV GYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAK LRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGA ATMVTATFGFVAVSHALKKMMAKAARQG >gi|299856449|gb|ADWV01000002.1| GENE 230 245423 - 245866 453 147 aa, chain - ## HITS:1 COG:ECs3671 KEGG:ns NR:ns ## COG: ECs3671 COG2166 # Protein_GI_number: 15832925 # Func_class: R General function prediction only # Function: SufE protein probably involved in Fe-S center assembly # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 271 97.0 3e-73 MTNPQFAGHPFGTTVTAETLRNTFAPLSQWEDKYRQLIMLGKQLPALPDELKAQAKEIAG CENRVWLGYTVTENGKMHFFGDSEGRIVRGLLAVLLTAVEGKTAAELQAQSPLALFDELG LRAQLSASRSQGLNALSEAIIAAAKQV >gi|299856449|gb|ADWV01000002.1| GENE 231 245866 - 247071 1045 401 aa, chain - ## HITS:1 COG:csdA KEGG:ns NR:ns ## COG: csdA COG0520 # Protein_GI_number: 16130717 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Escherichia coli K12 # 1 401 1 401 401 785 99.0 0 MNVFNPAQFRAQFPALLDAGVYLDSAATALKPEAVVEATRQFYSLSAGNVHRSQFAEAQR LTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYARPRLQPGDEIIVSVAEHH ANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPRSRILALGQMSNVTGGCPDLA RAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAFSGHKLYGPTGIGVLYGKSELLE AMSPWLGGGKMIHEVSFDGFTTQSAPWKLEAGTPNVAGVIGLSAALEWLADYDINQAESW SRSLATLAEEALAKRPGFRSFRCQDSSLLAFDFAGVHHSDMVTLLAEYGIALRAGQHCAQ PLLAELGVTGTLRASFAPYNTKSDVDALVNAVDRALELLVD >gi|299856449|gb|ADWV01000002.1| GENE 232 247263 - 247490 382 75 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_2919 NR:ns ## KEGG: ECIAI1_2919 # Name: ygdI # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 75 1 75 75 129 100.0 3e-29 MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNKQ QINRTDVKEMVELDQ >gi|299856449|gb|ADWV01000002.1| GENE 233 247841 - 248758 623 305 aa, chain + ## HITS:1 COG:ECs3668 KEGG:ns NR:ns ## COG: ECs3668 COG0583 # Protein_GI_number: 15832922 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 604 100.0 1e-173 MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL LLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAY PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPL KTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALAN NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAAAEQEKFR FRYEQ >gi|299856449|gb|ADWV01000002.1| GENE 234 248777 - 249172 472 131 aa, chain + ## HITS:1 COG:ECs3667 KEGG:ns NR:ns ## COG: ECs3667 COG2363 # Protein_GI_number: 15832921 # Func_class: S Function unknown # Function: Uncharacterized small membrane protein # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 204 100.0 3e-53 MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGLEYQAFHTLAILGLAVA MQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVTPVGGVSFLAGWALMLVGA IRLKRKGVSHE >gi|299856449|gb|ADWV01000002.1| GENE 235 249165 - 250265 1147 366 aa, chain + ## HITS:1 COG:ECs3666 KEGG:ns NR:ns ## COG: ECs3666 COG2933 # Protein_GI_number: 15832920 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 780 99.0 0 MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGELRVEVADTNESKELLKFC RKFTVPLRASLRDAGVLANYETPKRPVVHVFFIAPGCCYTGYSYSNNNSPFYMGIPRLKF PADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVD NGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRE TIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRRIWAAVG GRRDER >gi|299856449|gb|ADWV01000002.1| GENE 236 250309 - 251040 546 243 aa, chain - ## HITS:1 COG:fucR KEGG:ns NR:ns ## COG: fucR COG1349 # Protein_GI_number: 16130712 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 243 1 243 243 471 100.0 1e-133 MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQTQGKILRNHGRAKYIHR QNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDASSTCWYLARQLPDINIQVF TNSHPICHELGKRERIQLISSGGTLERKYGCYVNPSLISQLKSLEIDLFIFSCEGIDSSG ALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEARIGHLDEVTHIISDERQVATSL VTA >gi|299856449|gb|ADWV01000002.1| GENE 237 251098 - 251520 434 140 aa, chain - ## HITS:1 COG:ECs3664 KEGG:ns NR:ns ## COG: ECs3664 COG4154 # Protein_GI_number: 15832918 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose dissimilation pathway protein FucU # Organism: Escherichia coli O157:H7 # 1 140 1 140 140 268 100.0 2e-72 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPL FELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAI VITGERAKYGNILLKKGVTP >gi|299856449|gb|ADWV01000002.1| GENE 238 251522 - 252970 980 482 aa, chain - ## HITS:1 COG:fucK KEGG:ns NR:ns ## COG: fucK COG1070 # Protein_GI_number: 16130710 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 482 1 482 482 974 99.0 0 MLSGYIAGAIMKQEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENNTWHQWS LDAILQRFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQDNLLYPIISWKCPRTAAV MDNIEQLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERAHAWLFISSLINHRLTG EFTTDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIGTLQNSAAAMLGL PVGIPVISAGHDTQFALFGAGADQNEPVLSSGTWEILMVRSAQVDTSLLSQYAGSTCELD SQAGLYNPGMQWLASGVLEWVRKLFWTAETPWQMLIEEARLIAPGADGVKMQCDLLSCQN AGWQGVTLNTTRGHFYRAALEGLTAQLQRNLQMLEKIGHFKASELLLVGGGSRNTLWNQI KANMLDIPVKVLDDAETTVAGAALFGWYGVGEFNSPEEARAQIHYQYRYFYPQTEPEFIE EV >gi|299856449|gb|ADWV01000002.1| GENE 239 253049 - 254824 1888 591 aa, chain - ## HITS:1 COG:fucI KEGG:ns NR:ns ## COG: fucI COG2407 # Protein_GI_number: 16130709 # Func_class: G Carbohydrate transport and metabolism # Function: L-fucose isomerase and related proteins # Organism: Escherichia coli K12 # 1 591 1 591 591 1220 99.0 0 MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDT CIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPTRPKAIWGFNGTERPGAVY LAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLLRFARAGLAVASMKGKSYLSL GGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDQKIYDEAELEMALTWADKNFRY GEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQGNSKLADIGRVEESLGYNAIAAGFQ GQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVVATENDSLNGVAMLMGHQLTGTAQVFA DVRTYWSPEAIERVTGHKLDGLAEHGIIHLINSGSAALDGSCKQRDSEGNPTMKPHWEIS QQEADACLAATEWCPAIHEYFRGGGYSSRFLTEGGVPFTMTRVNIIKGLGPVLQIAEGWS VELPKDVHDILNKRTNSTWPTTWFAPRLTGKGPFTDVYSVMANWGANHGVLTIGHVGADF ITLASMLRIPVCMHNVEETKVYRPSAWAAHGMDIEGQDYRACQNYGPLYKR >gi|299856449|gb|ADWV01000002.1| GENE 240 254857 - 256173 821 438 aa, chain - ## HITS:1 COG:fucP KEGG:ns NR:ns ## COG: fucP COG0738 # Protein_GI_number: 16130708 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Escherichia coli K12 # 1 438 1 438 438 808 100.0 0 MGNTSIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTN FQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLF LVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSN VPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANY LTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAF MSIQYPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPAL CFAVIFIFARFRSQTATN >gi|299856449|gb|ADWV01000002.1| GENE 241 256720 - 257367 635 215 aa, chain + ## HITS:1 COG:fucA KEGG:ns NR:ns ## COG: fucA COG0235 # Protein_GI_number: 16130707 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 215 1 215 215 429 99.0 1e-120 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGIPYEKLTESHIVFIDG NGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRSIPAIHYMIAAAGG NSIPCAPYATFGTRELSEHVAQALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQL YLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE >gi|299856449|gb|ADWV01000002.1| GENE 242 257395 - 258543 1263 382 aa, chain + ## HITS:1 COG:ECs3659 KEGG:ns NR:ns ## COG: ECs3659 COG1454 # Protein_GI_number: 15832913 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 382 2 383 383 745 100.0 0 MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLA WAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRS LEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADM MDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVAGDKDAGE EMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYR DIARVMGVKVEGMSLEEARNAAVEAVFALNRDVGIPPHLRDVGVRKEDIPALAQAALDDV CTGGNPREATLEDIVELYHTAW >gi|299856449|gb|ADWV01000002.1| GENE 243 258598 - 259353 478 251 aa, chain - ## HITS:1 COG:exo KEGG:ns NR:ns ## COG: exo COG0258 # Protein_GI_number: 16130705 # Func_class: L Replication, recombination and repair # Function: 5'-3' exonuclease (including N-terminal domain of PolI) # Organism: Escherichia coli K12 # 1 251 31 281 281 519 99.0 1e-147 MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRH QRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQ ATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVP GVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHI DGNLQQLRLVR >gi|299856449|gb|ADWV01000002.1| GENE 244 259465 - 260832 1437 455 aa, chain - ## HITS:1 COG:sdaB KEGG:ns NR:ns ## COG: sdaB COG1760 # Protein_GI_number: 16130704 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli K12 # 1 455 1 455 455 908 99.0 0 MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTRVVVDVYGSLSLTGKGH HTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQHEVEFPVDQCMNFHADNL SLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQNSAPVEVPYPYSSAADLQKH CQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRGGIERGISTEGVLPGKLRVPRRA AALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENAAGGRVVTAPTNGACGIIPAVLAYY DKFIREVNANSLARYLLVASAIGSLYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGA SPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPCIERNAIAAVKAVNAARMALRRTSEPRVC LDKVIETMYETGKDMNAKYRETSRGGLAMKIVACD >gi|299856449|gb|ADWV01000002.1| GENE 245 260890 - 262179 1481 429 aa, chain - ## HITS:1 COG:ECs3656 KEGG:ns NR:ns ## COG: ECs3656 COG0814 # Protein_GI_number: 15832910 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 429 1 429 429 733 100.0 0 METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGMIPLIIMAILA FPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLITLLYFFAIYPILLVYSVAI TNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSILVFPFVGVLMLLA LYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVMVFSFNHSPIISSFAVAKREEYG DMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPADLAAAKEQNISILSYLANHFNAPV IAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIKSLRGKGKSIEINKLNRITALFMLVTT WIVATLNPSILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHISNVFVVVMGLIAI SAIFYSLFS >gi|299856449|gb|ADWV01000002.1| GENE 246 262736 - 264100 1396 454 aa, chain - ## HITS:1 COG:ECs3655 KEGG:ns NR:ns ## COG: ECs3655 COG1611 # Protein_GI_number: 15832909 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Escherichia coli O157:H7 # 1 454 1 454 454 931 100.0 0 MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFEN FDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLRDILFVYGQIHNTVRFPNL NLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSINENEYLYARRVGNQLGLRELN ICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEK RLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPLILTGPKESADYFRVLD EFVVHTLGENARRHYRIIIDDAAEVARQMKKSMPLVKENRRDTGDAYSFNWSMRIAPDLQ MPFEPSHENMANLKLYPDQPVEVLAADLRRAFSGIVAGNVKEVGIRAIEEFGPYKINGDK EIMRRMDDLLQGFVAQHRMKLPGSAYIPCYEICT >gi|299856449|gb|ADWV01000002.1| GENE 247 264212 - 265060 653 282 aa, chain - ## HITS:1 COG:yqcD_2 KEGG:ns NR:ns ## COG: yqcD_2 COG0780 # Protein_GI_number: 16130701 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Escherichia coli K12 # 138 282 1 145 145 307 99.0 2e-83 MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLKADNLPFHGTDIWTLY ELSWLNAKGLPQVAVGHVELDYTSANLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLS TCAQGKVSVALYRLDELEGQPIGHFNGTCIDDQDITIDNYEFTTDYLENATCGEKVVEET LVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRYLVSFRHHNEFHEQCVERIFNDL LRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPSTTRLVRQ >gi|299856449|gb|ADWV01000002.1| GENE 248 265128 - 265673 480 181 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3336 NR:ns ## KEGG: ECO103_3336 # Name: syd # Def: SecY interacting protein Syd # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 181 1 181 181 367 100.0 1e-101 MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIISTTEDAVYWQPQPFTGEQ NVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQTWSEDDFRRVQENLIGHL VTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGTRKRTHLASNLAEFLNQLKPL L >gi|299856449|gb|ADWV01000002.1| GENE 249 266295 - 266624 336 109 aa, chain + ## HITS:1 COG:ECs3652 KEGG:ns NR:ns ## COG: ECs3652 COG3098 # Protein_GI_number: 15832906 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 177 100.0 4e-45 MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH DLLNNNQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS >gi|299856449|gb|ADWV01000002.1| GENE 250 266624 - 267406 193 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 3 219 82 276 287 79 27 3e-13 MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGV LLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDK GSQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSK HGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQFGWRGLL PENERVEFSAPSGQDGEISS >gi|299856449|gb|ADWV01000002.1| GENE 251 267424 - 267873 610 149 aa, chain + ## HITS:1 COG:ECs3650 KEGG:ns NR:ns ## COG: ECs3650 COG0716 # Protein_GI_number: 15832904 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 149 1 149 149 291 99.0 2e-79 MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTG QGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVG EILLIDASENPEPETESNPWVEQWGTLLS >gi|299856449|gb|ADWV01000002.1| GENE 252 268308 - 269660 1521 450 aa, chain + ## HITS:1 COG:ygcZ KEGG:ns NR:ns ## COG: ygcZ COG0477 # Protein_GI_number: 16130696 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 450 1 450 450 817 99.0 0 MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYV FSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTL RFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQYFATVIFAPIMGWLTHEVGWS HVFFFMGGLGIVISFIWLKVIHEPNQHPGVNQKELEYIAAGGALINMDQQNTKVKVPFSV KWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVC GFIGGVLGGIISDWLMRRTGSLNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAF FGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIY VGVHALIAVLSYLVLVGDIKRIELKPVAGQ >gi|299856449|gb|ADWV01000002.1| GENE 253 269662 - 271002 1459 446 aa, chain + ## HITS:1 COG:ygcY KEGG:ns NR:ns ## COG: ygcY COG4948 # Protein_GI_number: 16130695 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 446 1 446 446 897 98.0 0 MTTQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGIGEAPGGEVI YQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALL DLLGKALNVPVCELLGPGKQRETITVLGYLFYIGDRTKTDLPYLENTPGNHEWYQLRHQK AMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDTVRALKKRFPDARITVDPNGAWL LDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHA VMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGN PTAIDTHWIWQEGDCRLTKNPLEIKNGKIAVPDAPGLGVELDWEQVQKAHEAYKRLPVGA RNDAGPMQYLIPGWTFDRKRPVFGRH >gi|299856449|gb|ADWV01000002.1| GENE 254 271023 - 272363 1679 446 aa, chain + ## HITS:1 COG:ECs3647 KEGG:ns NR:ns ## COG: ECs3647 COG4948 # Protein_GI_number: 15832901 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli O157:H7 # 1 446 1 446 446 926 99.0 0 MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNILIIKDNSGYTGVGEIPGGEK IRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAM LDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGDRKATPLPYQSQPDDSCDWYRLRHE EAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNGAW SLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGH TLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPG KITAIDTHWIWQEGNQRLTKEPFEIKGGLVQVPEKPGLGVEIDMDQVMKAHELYQKHGLG ARDDAMGMQYLIPGWTFDNKRPCMVR >gi|299856449|gb|ADWV01000002.1| GENE 255 272595 - 275351 2520 918 aa, chain - ## HITS:1 COG:ECs3646_1 KEGG:ns NR:ns ## COG: ECs3646_1 COG0642 # Protein_GI_number: 15832900 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 531 1 531 531 1033 100.0 0 MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGM SLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQL TVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFIS SVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGI NSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANM SHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLI LESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNA IKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHG GTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLA YVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLA KAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPV TDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQ MPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNL LLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEV RNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELL ELLDEMDNVAREASKILG >gi|299856449|gb|ADWV01000002.1| GENE 256 275408 - 276709 938 433 aa, chain + ## HITS:1 COG:ygcA KEGG:ns NR:ns ## COG: ygcA COG2265 # Protein_GI_number: 16130692 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 433 1 433 433 867 98.0 0 MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQ YARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVI ADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPKLEALLPKVRACL GSLQVMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILE TVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNF TLPLAKQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKV LLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHT GHLESMVLFSRVK >gi|299856449|gb|ADWV01000002.1| GENE 257 276757 - 278991 2351 744 aa, chain + ## HITS:1 COG:ECs3644 KEGG:ns NR:ns ## COG: ECs3644 COG0317 # Protein_GI_number: 15832898 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Escherichia coli O157:H7 # 1 744 1 744 744 1509 100.0 0 MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGV EMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLK ATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTN IYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEM KAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHY RHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEG AAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPA GSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNL GYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVD ELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVE GVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGES YSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQ VLGRVLGKLNQVPDVIDARRLHGS >gi|299856449|gb|ADWV01000002.1| GENE 258 279069 - 279317 273 82 aa, chain + ## HITS:1 COG:ECs3643 KEGG:ns NR:ns ## COG: ECs3643 COG2336 # Protein_GI_number: 15832897 # Func_class: T Signal transduction mechanisms # Function: Growth regulator # Organism: Escherichia coli O157:H7 # 1 82 1 82 82 148 100.0 2e-36 MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVN DITPENLHENIDWGEPKDKEVW >gi|299856449|gb|ADWV01000002.1| GENE 259 279317 - 279652 202 111 aa, chain + ## HITS:1 COG:ECs3642 KEGG:ns NR:ns ## COG: ECs3642 COG2337 # Protein_GI_number: 15832896 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 226 99.0 7e-60 MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPYTTQSKGYPF EVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG >gi|299856449|gb|ADWV01000002.1| GENE 260 279723 - 280514 1058 263 aa, chain + ## HITS:1 COG:ECs3641 KEGG:ns NR:ns ## COG: ECs3641 COG1694 # Protein_GI_number: 15832895 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 478 100.0 1e-135 MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELG DLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKT EERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEA RQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLE MTGVDLETMEEVWQQVKRQEIDL >gi|299856449|gb|ADWV01000002.1| GENE 261 280742 - 282379 1701 545 aa, chain + ## HITS:1 COG:ECs3640 KEGG:ns NR:ns ## COG: ECs3640 COG0504 # Protein_GI_number: 15832894 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Escherichia coli O157:H7 # 1 545 1 545 545 1101 100.0 0 MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEV FVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHIT NAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYM AASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKD VDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIE LPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEG MITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWR DENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQ IEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQ KRQAK >gi|299856449|gb|ADWV01000002.1| GENE 262 282467 - 283765 1619 432 aa, chain + ## HITS:1 COG:ECs3639 KEGG:ns NR:ns ## COG: ECs3639 COG0148 # Protein_GI_number: 15832893 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 760 100.0 0 MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFL GKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAK AAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVK EAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKD ITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDG FAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAK DAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKA PYNGRKEIKGQA >gi|299856449|gb|ADWV01000002.1| GENE 263 283825 - 284697 193 290 aa, chain - ## HITS:1 COG:ygcG KEGG:ns NR:ns ## COG: ygcG COG1512 # Protein_GI_number: 16130685 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Escherichia coli K12 # 1 262 24 285 313 480 98.0 1e-135 MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIA VLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDA LAGDIIRSNMIPAFKQQKFAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAI FWVFAVMFFPFWFFHQGSNFCRACKSGVYISAIYLLDLFLFSDKIFSIAVFSFFFTFTIF MVFTCLCVLQKRASGKSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW >gi|299856449|gb|ADWV01000002.1| GENE 264 284711 - 284851 182 46 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_3081 NR:ns ## KEGG: EcE24377A_3081 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 46 1 46 46 65 100.0 6e-10 MSEENKENGFNHVKTFTKIIFIFSVLVFNDNESKITDAAVNLFIQI >gi|299856449|gb|ADWV01000002.1| GENE 265 284990 - 285661 218 223 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803532|ref|YP_001492081.1| 50S ribosomal protein L35 [Rickettsia canadensis str. McKiel] # 5 222 20 224 225 88 30 3e-16 MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAK TKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETS GTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLTD DKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA >gi|299856449|gb|ADWV01000002.1| GENE 266 285979 - 286764 -79 261 aa, chain - ## HITS:1 COG:no KEGG:ECB_02621 NR:ns ## KEGG: ECB_02621 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_B_REL606 # Pathway: not_defined # 19 261 39 282 282 184 53.0 2e-45 MRFIPAGAGNTAPEHLPQCDTPVYPRWRGEHTVISLPLGDRNGLSPLARGTRNSLRIRQQ KYRFIPAGAGNTALLCRSRSVPTVYPRWRGEHGNRSLNSTPASGLSPLARGTHLSPYEFY APSRFIPAGAGNTASHSIRWFSMTVYPRWRGEHVTWRRPAIDFSGLSPLARGTLEPVFLS ARNFRFIPAGAGNTVRIGFENLYAPVYPRWRGEHGYASNIQRWERGLSPLARGTRVSSCG AGSPWRFIPAGAGNTLNITYY >gi|299856449|gb|ADWV01000002.1| GENE 267 287888 - 289366 1487 492 aa, chain - ## HITS:1 COG:ygcE KEGG:ns NR:ns ## COG: ygcE COG1070 # Protein_GI_number: 16130683 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 492 1 492 492 1025 99.0 0 MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFA GHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVA YVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMP GTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGK ALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLL NKKASSVPPGCHGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNN YDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGL GLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGEL GNVDSIQSWSNA >gi|299856449|gb|ADWV01000002.1| GENE 268 289393 - 290520 1233 375 aa, chain - ## HITS:1 COG:ECs3631 KEGG:ns NR:ns ## COG: ECs3631 COG0477 # Protein_GI_number: 15832885 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 375 51 425 425 650 99.0 0 MSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAI TTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASL KTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVI FSVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPT RVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSY IMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQ KIRTADSAPAMASSK >gi|299856449|gb|ADWV01000002.1| GENE 269 290988 - 291773 180 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 16 256 1 238 242 73 26 8e-12 MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEM IEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDP MIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAY CDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLA SPASNYVNGHLLVVDGGYLVR >gi|299856449|gb|ADWV01000002.1| GENE 270 291843 - 293297 1374 484 aa, chain + ## HITS:1 COG:ECs3629 KEGG:ns NR:ns ## COG: ECs3629 COG0277 # Protein_GI_number: 15832883 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli O157:H7 # 1 484 1 484 484 1011 99.0 0 MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGST EQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATA QCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEA VLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILED MKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEG IAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIH EIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNP LNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIY PIEK >gi|299856449|gb|ADWV01000002.1| GENE 271 293391 - 294728 1132 445 aa, chain + ## HITS:1 COG:ygcS KEGG:ns NR:ns ## COG: ygcS COG0477 # Protein_GI_number: 16130678 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 445 25 469 469 745 100.0 0 MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIG GSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIG LGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLAS AALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTL FSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLG LVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPA ESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLW APETKALPLVAAGNVGGANEHSVSV >gi|299856449|gb|ADWV01000002.1| GENE 272 294706 - 295485 748 259 aa, chain + ## HITS:1 COG:ygcR KEGG:ns NR:ns ## COG: ygcR COG2086 # Protein_GI_number: 16130677 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Escherichia coli K12 # 1 259 3 261 261 466 100.0 1e-131 MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTP MSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLI ITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAV IAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQT VAEKAQKLWQDYLRQRMQP >gi|299856449|gb|ADWV01000002.1| GENE 273 295482 - 296342 727 286 aa, chain + ## HITS:1 COG:ygcQ KEGG:ns NR:ns ## COG: ygcQ COG2025 # Protein_GI_number: 16130676 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Escherichia coli K12 # 1 286 12 297 297 536 99.0 1e-152 MNIAIVTINQENAAIASWLAAQDFSGCILAHWQIEPQPVVAEQVLDALVEQWQRTPADVV LFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLS LARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEA DNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAG VRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ >gi|299856449|gb|ADWV01000002.1| GENE 274 296490 - 297065 564 191 aa, chain - ## HITS:1 COG:ygcP KEGG:ns NR:ns ## COG: ygcP COG1954 # Protein_GI_number: 16130675 # Func_class: K Transcription # Function: Glycerol-3-phosphate responsive antiterminator (mRNA-binding) # Organism: Escherichia coli K12 # 1 191 1 191 191 377 100.0 1e-105 MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIH VDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNID KQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTN TGVWTLAKKLL >gi|299856449|gb|ADWV01000002.1| GENE 275 297082 - 297342 227 86 aa, chain - ## HITS:1 COG:ECs3622 KEGG:ns NR:ns ## COG: ECs3622 COG2440 # Protein_GI_number: 15832876 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Escherichia coli O157:H7 # 1 86 13 98 98 176 96.0 1e-44 MSVAHNLWRVADAPHIVPADSVERQMVQRLINACPAGLFSLTPEGDLRVDYHGCLECGTC RLLCDESTLQQWRYPPSGFGITYRFG >gi|299856449|gb|ADWV01000002.1| GENE 276 297333 - 298604 722 423 aa, chain - ## HITS:1 COG:ygcN KEGG:ns NR:ns ## COG: ygcN COG0644 # Protein_GI_number: 16130673 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli K12 # 1 423 11 433 433 827 99.0 0 MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQ FHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECI PGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIK EVLSLETSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQ SRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALR SCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFALYHHNVERSLLWDVLQRYQH VPALLQRPGWYRAWPALMQDISRDLWDQGDKPVPPLRQLFWRHLRRHGLWHLAGDVIRSL RCL >gi|299856449|gb|ADWV01000002.1| GENE 277 298682 - 299044 430 120 aa, chain - ## HITS:1 COG:ECs3620 KEGG:ns NR:ns ## COG: ECs3620 COG0720 # Protein_GI_number: 15832874 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Escherichia coli O157:H7 # 1 120 2 121 121 251 100.0 2e-67 MSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAA FKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE >gi|299856449|gb|ADWV01000002.1| GENE 278 299363 - 301162 1815 599 aa, chain + ## HITS:1 COG:ECs3619 KEGG:ns NR:ns ## COG: ECs3619 COG0369 # Protein_GI_number: 15832873 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, alpha subunit (flavoprotein) # Organism: Escherichia coli O157:H7 # 1 599 1 599 599 1152 99.0 0 MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAE MPGITIISASQTGNARRVAEALRDDLLTAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQG EGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERL LDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVAS LSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLTGDE PVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPI VDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGG ASSFLADRVEEEGELRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAP GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELW RWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY >gi|299856449|gb|ADWV01000002.1| GENE 279 301162 - 302874 1943 570 aa, chain + ## HITS:1 COG:ECs3618 KEGG:ns NR:ns ## COG: ECs3618 COG0155 # Protein_GI_number: 15832872 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Escherichia coli O157:H7 # 1 570 1 570 570 1186 100.0 0 MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQ DDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTF QFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEH LLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAI AENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRT DRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTL FIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGL MNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCP NGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAK EREAGEGFGDFTVRAGIIRPVLDPARDLWD >gi|299856449|gb|ADWV01000002.1| GENE 280 302948 - 303682 962 244 aa, chain + ## HITS:1 COG:cysH KEGG:ns NR:ns ## COG: cysH COG0175 # Protein_GI_number: 16130669 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Escherichia coli K12 # 1 244 1 244 244 491 99.0 1e-139 MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAV SLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKL WEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVL PIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECG LHEG >gi|299856449|gb|ADWV01000002.1| GENE 281 303947 - 304099 164 50 aa, chain + ## HITS:1 COG:no KEGG:G2583_3410 NR:ns ## KEGG: G2583_3410 # Name: small # Def: small toxic membrane polypeptide # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 50 46 95 95 95 100.0 8e-19 MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK >gi|299856449|gb|ADWV01000002.1| GENE 282 304176 - 305288 284 370 aa, chain + ## HITS:1 COG:yi81 KEGG:ns NR:ns ## COG: yi81 COG3385 # Protein_GI_number: 16130326 # Func_class: L Replication, recombination and repair # Function: FOG: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 370 3 372 372 728 100.0 0 MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREV TAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAIS APGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECI RSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGA PFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQ VADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFP PRSAGSEKKN >gi|299856449|gb|ADWV01000002.1| GENE 283 305311 - 305451 62 46 aa, chain + ## HITS:1 COG:no KEGG:APECO1_O1CoBM122 NR:ns ## KEGG: APECO1_O1CoBM122 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 46 17 62 62 72 100.0 3e-12 MVIWSLQVAIRGTVSLTAYKTQLKNARHRLNEAPRRRILQMVQPLS >gi|299856449|gb|ADWV01000002.1| GENE 284 305642 - 308341 1476 899 aa, chain + ## HITS:1 COG:ZygcB KEGG:ns NR:ns ## COG: ZygcB COG1203 # Protein_GI_number: 15803278 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Escherichia coli O157:H7 EDL933 # 1 898 1 898 899 1756 94.0 0 MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGL ADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHS TLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGQPPDRMDELDNFLPED KAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRV AHPMDIKGYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQ QGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAF YSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLA EIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGN SVILLSATLSQQQRDKLVAAFARGTEGQQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKD VERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSL FHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPVDL LIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYP DHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMA KKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVR VRRSWWKKHRDEFSLLEGEAFRLWCIEQRQDPEMANVILVNDDESCGYSATEGLIGKVG >gi|299856449|gb|ADWV01000002.1| GENE 285 308439 - 310001 1103 520 aa, chain + ## HITS:1 COG:no KEGG:ECSE_3015 NR:ns ## KEGG: ECSE_3015 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 520 1 520 520 1059 100.0 0 MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAVWQFLLGLLQTSF APKDHRRWDDIWEDGLEAEKLREALQSLEHAFQFGPDSPSFMQDFEALKGDKVQVASLLP EIPGAQTTKFNKDHFIKRGVTEHVCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTL IELQEYQGNQQTPLWRKLWPNVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTHD QVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPY RIPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGL WGFGYDFDNMKARCWYEHHFPLLLKKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDP KGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEIWLFARQDFDERVFT NPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE >gi|299856449|gb|ADWV01000002.1| GENE 286 309998 - 310534 388 178 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3032 NR:ns ## KEGG: EC55989_3032 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 178 1 178 178 320 100.0 1e-86 MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPE WRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRL LNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ >gi|299856449|gb|ADWV01000002.1| GENE 287 310546 - 311601 1270 351 aa, chain + ## HITS:1 COG:no KEGG:ECSE_3013 NR:ns ## KEGG: ECSE_3013 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 351 1 351 351 667 100.0 0 MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAG HIGIRSGRIAREAATILIEKGIEDKKAIEWSAKIADYLGKAKNDKKPKDPLTNAETEQLV HISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAAC QVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVEN LGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPI NGTRQLEVAVQRITTLRENMNTVYEQKTDYASFDVMNKQGSMKDVLDFICA >gi|299856449|gb|ADWV01000002.1| GENE 288 311612 - 312358 521 248 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_4010 NR:ns ## KEGG: ECH74115_4010 # Name: cas5e # Def: CRISPR-associated protein Cas5 # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 248 1 248 248 462 98.0 1e-129 MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRH YSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWM VAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQY QDRFRELKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSK EEPCTSQE >gi|299856449|gb|ADWV01000002.1| GENE 289 312340 - 312990 385 216 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3298 NR:ns ## KEGG: ECO103_3298 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 216 1 216 216 414 97.0 1e-114 MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFV LSQERPAESETFTIECRSFTPELSTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQA EGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSWQLIQFSSVDYTGM LTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA >gi|299856449|gb|ADWV01000002.1| GENE 290 312987 - 313910 631 307 aa, chain + ## HITS:1 COG:ECs3609 KEGG:ns NR:ns ## COG: ECs3609 COG1518 # Protein_GI_number: 15832863 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Escherichia coli O157:H7 # 1 307 1 307 307 595 98.0 1e-170 MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRV SHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMY ELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCI SAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDLVVPKAFEIAARQP AEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDS GHRGRGG >gi|299856449|gb|ADWV01000002.1| GENE 291 313907 - 314200 212 97 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_2857 NR:ns ## KEGG: ECIAI1_2857 # Name: ygbF # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 97 1 97 97 187 100.0 1e-46 MSMIVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQISQLAGCGNVVMAW ATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ >gi|299856449|gb|ADWV01000002.1| GENE 292 314288 - 314443 59 51 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300815835|ref|ZP_07096059.1| ## NR: gi|300815835|ref|ZP_07096059.1| conserved hypothetical protein [Escherichia coli MS 107-1] # 4 51 1 48 48 89 97.0 8e-17 MLSVFPAPAGINRNKTLEAGTDICVPRASGDKPLIELAQELHEECSPRQRG >gi|299856449|gb|ADWV01000002.1| GENE 293 314894 - 315931 686 345 aa, chain - ## HITS:1 COG:iap KEGG:ns NR:ns ## COG: iap COG2234 # Protein_GI_number: 16130660 # Func_class: R General function prediction only # Function: Predicted aminopeptidases # Organism: Escherichia coli K12 # 1 345 1 345 345 696 99.0 0 MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADY IRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDT YAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKL GAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHG IAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPA GNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS >gi|299856449|gb|ADWV01000002.1| GENE 294 316183 - 317091 1147 302 aa, chain + ## HITS:1 COG:cysD KEGG:ns NR:ns ## COG: cysD COG0175 # Protein_GI_number: 16130659 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Escherichia coli K12 # 1 302 1 302 302 623 99.0 1e-178 MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPL LHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLK QALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGES IRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIK KRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQG YF >gi|299856449|gb|ADWV01000002.1| GENE 295 317093 - 318520 1591 475 aa, chain + ## HITS:1 COG:cysN KEGG:ns NR:ns ## COG: cysN COG2895 # Protein_GI_number: 16130658 # Func_class: P Inorganic ion transport and metabolism # Function: GTPases - Sulfate adenylate transferase subunit 1 # Organism: Escherichia coli K12 # 1 475 1 475 475 948 100.0 0 MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLS SLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQY TRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETF TRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRV VDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDRE EAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIA GKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIF IDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK >gi|299856449|gb|ADWV01000002.1| GENE 296 318520 - 319125 573 201 aa, chain + ## HITS:1 COG:ECs3604 KEGG:ns NR:ns ## COG: ECs3604 COG0529 # Protein_GI_number: 15832858 # Func_class: P Inorganic ion transport and metabolism # Function: Adenylylsulfate kinase and related kinases # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 397 100.0 1e-111 MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTY LLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRE RVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQ LVTNLVQQLLDLLRQNDIIRS >gi|299856449|gb|ADWV01000002.1| GENE 297 319175 - 319498 467 107 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_2875 NR:ns ## KEGG: EcSMS35_2875 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 107 1 107 107 176 100.0 2e-43 MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPF FLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG >gi|299856449|gb|ADWV01000002.1| GENE 298 319692 - 320003 224 103 aa, chain + ## HITS:1 COG:ECs3602 KEGG:ns NR:ns ## COG: ECs3602 COG2919 # Protein_GI_number: 15832856 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Escherichia coli O157:H7 # 16 103 16 103 103 164 100.0 4e-41 MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDL NGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR >gi|299856449|gb|ADWV01000002.1| GENE 299 320022 - 320732 315 236 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 10 227 6 223 234 125 37 2e-27 MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISP GDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARL LALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTR ALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT >gi|299856449|gb|ADWV01000002.1| GENE 300 320732 - 322258 1743 508 aa, chain + ## HITS:1 COG:ECs3599 KEGG:ns NR:ns ## COG: ECs3599 COG0585 # Protein_GI_number: 15832853 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 160 508 1 349 349 706 99.0 0 MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL FPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDL GCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATKMIEFDNLTYLHGKPQGTGLLK ANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDK HAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNR DDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSA LFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPG SGEWGTQREALAFEKAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIR FWLPAGSFATSVVRELINTTGDYAHIAE >gi|299856449|gb|ADWV01000002.1| GENE 301 322239 - 323000 690 253 aa, chain + ## HITS:1 COG:ECs3598 KEGG:ns NR:ns ## COG: ECs3598 COG0496 # Protein_GI_number: 15832852 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 505 100.0 1e-143 MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGD IAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPA LAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRH PADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV SDWLNSVGVGTQW >gi|299856449|gb|ADWV01000002.1| GENE 302 322994 - 323620 549 208 aa, chain + ## HITS:1 COG:ECs3597 KEGG:ns NR:ns ## COG: ECs3597 COG2518 # Protein_GI_number: 15832851 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-L-isoaspartate carboxylmethyltransferase # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 397 100.0 1e-111 MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQ PYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNL DLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGEEHQYLK RVRRRGGEFIIDTVEAVRFVPLVKGELA >gi|299856449|gb|ADWV01000002.1| GENE 303 323760 - 324899 620 379 aa, chain + ## HITS:1 COG:ECs3596 KEGG:ns NR:ns ## COG: ECs3596 COG0739 # Protein_GI_number: 15832850 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Escherichia coli O157:H7 # 1 379 1 379 379 553 99.0 1e-157 MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAPANTNSGMLITPPPKMG TTSTAQQPQIQPVQQPQIQATQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGSYSG STYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITGGNAIT QADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPAATTVTAPVTVPT ASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEGGNKGIDIAGSKGQAIIATADGRV VYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMGSTGTSSTRLH FEIRYKGKSVNPLRYLPQR >gi|299856449|gb|ADWV01000002.1| GENE 304 324962 - 325954 1163 330 aa, chain + ## HITS:1 COG:ECs3595 KEGG:ns NR:ns ## COG: ECs3595 COG0568 # Protein_GI_number: 15832849 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 576 100.0 1e-164 MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQL YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLI EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE RVRQIQVEGLRRLREILQTQGLNIEALFRE >gi|299856449|gb|ADWV01000002.1| GENE 305 326075 - 326482 273 135 aa, chain - ## HITS:1 COG:Z4048 KEGG:ns NR:ns ## COG: Z4048 COG1846 # Protein_GI_number: 15803257 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 EDL933 # 1 134 12 145 146 233 97.0 7e-62 MALRNKAFHQLRQLFQQHTARWQHELPDLTKPQYAVMRAIADKPGIEQVALIEAAVSTKA TLAEMLARMENRGLVRREHDPADKRRRFVWLTAEGEKILAAAIPIGDSVDEEFLGRLSGE EQELFMQLVRKMMNA >gi|299856449|gb|ADWV01000002.1| GENE 306 326629 - 327222 560 197 aa, chain + ## HITS:1 COG:ECs3593 KEGG:ns NR:ns ## COG: ECs3593 COG0163 # Protein_GI_number: 15832847 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Escherichia coli O157:H7 # 1 197 1 197 197 381 98.0 1e-106 MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAKTTIELETPYSARDVAALADF SHNPADQAAIISSGSFRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLV PREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHPHA RRWQGLPQARNFSQENE >gi|299856449|gb|ADWV01000002.1| GENE 307 327222 - 328649 1844 475 aa, chain + ## HITS:1 COG:ECs3592 KEGG:ns NR:ns ## COG: ECs3592 COG0043 # Protein_GI_number: 15832846 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Escherichia coli O157:H7 # 1 475 1 475 475 961 99.0 0 MAFDDLRSFLQELDDHGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDA RVAMNTIGSWQNHAISLGLPPNAPVKKQIDEFIRRWDNFPIAPERRANPAWAQNTVDGDE INLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQNVGIYRMEVKGKRKLGLQPV PMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIA TAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYRTRPI FESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGF ARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWALSSKVNPAGDLVQLPNMSVLE LDPGSSPAGITDKLIIDATTPVAPDNRGHYSQPVVDLPETKAWAEKLTAMLAARK >gi|299856449|gb|ADWV01000002.1| GENE 308 328660 - 328896 327 78 aa, chain + ## HITS:1 COG:no KEGG:ECO111_3461 NR:ns ## KEGG: ECO111_3461 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 78 1 78 78 145 100.0 4e-34 MICPRCADEQIEVMAKSPVKDVWTVYQCQHCLYTWRDTEPLRRTSREHYPEAFRMTQKDI DDAPMVPSIPPLLVEGKR >gi|299856449|gb|ADWV01000002.1| GENE 309 328935 - 330299 1240 454 aa, chain - ## HITS:1 COG:ygbN KEGG:ns NR:ns ## COG: ygbN COG2610 # Protein_GI_number: 16130647 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli K12 # 1 454 1 454 454 685 99.0 0 MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGG VLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDV GFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPPHPGPVAAAGLLHADIGWLTI IGIAISIPVGIVGYFAAKIINTRQYAMSVEVLEQMQLAPASEEGATKLSDKINPPGVALV TSLIVIPIAIIMAGTVSATLMPPSHPLLGTLQLIGSPMVALMIALVLAFWLLALRRGWSL QHTSDIMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIDLPLLPAAFIISL ALRASQGSATVAILTTGGLLSEAVMGLNPIQCVLVTLAACFGGLGASHINDSGFWIVTKY LGLSVADGLKTWTVLTTILGFTGFLITWCVWAVI >gi|299856449|gb|ADWV01000002.1| GENE 310 330388 - 331164 729 258 aa, chain - ## HITS:1 COG:ygbM KEGG:ns NR:ns ## COG: ygbM COG3622 # Protein_GI_number: 16130646 # Func_class: G Carbohydrate transport and metabolism # Function: Hydroxypyruvate isomerase # Organism: Escherichia coli K12 # 1 258 1 258 258 522 98.0 1e-148 MPRFAANLSMMFTEVPFIERFAAARKAGFDAVEFLFPYDYSTLQIQKQLEQNHLTLALFN TAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRA VFIDNLRYAADRFALHGKRILVEALSPDVKPHYLFSSQYQALAIVEEVARDNVFIQLDTF HAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGEINYPWLFRLFDEVGYQGWIGCE YKPRGLTEEGLGWFDAWR >gi|299856449|gb|ADWV01000002.1| GENE 311 331169 - 331807 431 212 aa, chain - ## HITS:1 COG:ygbL KEGG:ns NR:ns ## COG: ygbL COG0235 # Protein_GI_number: 16130645 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 212 1 212 212 432 100.0 1e-121 MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQR LSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHSTWSTALSCLQGLDSSNVIR PFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAFLLANHGPVVCGESLQEAANN MEELEETAKLIFILGDRPIRYLTAGEIAELRS >gi|299856449|gb|ADWV01000002.1| GENE 312 331804 - 333066 1036 420 aa, chain - ## HITS:1 COG:ygbK KEGG:ns NR:ns ## COG: ygbK COG3395 # Protein_GI_number: 16130644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 385 1 385 388 734 98.0 0 MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAIDALVISLKTRSCPVVEA TQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDALMDALDTPFTVFSPALPVN GRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEAQSTGRCGVVSAHVFEQGVDA VRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPLVTGGSGLAIGLARQWAQENGNQ AREAGHPLAGRGVVLSGSCSQMTNRQVAHYRQIAPAREVDVARCLSTETLAAYAHELAEW VLGQESVLAPLVFATASTDALAAIQQQYGAQKASQAVETLFSQLAARLAAEGVTRFIVAG GETSGVVTQSLGIKGFHIGPTISPGVPWVNALDKPVSLALKSGNFGDEAFFSRAQREFLS >gi|299856449|gb|ADWV01000002.1| GENE 313 333063 - 333971 890 302 aa, chain - ## HITS:1 COG:ygbJ KEGG:ns NR:ns ## COG: ygbJ COG2084 # Protein_GI_number: 16130643 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli K12 # 1 302 1 302 302 493 99.0 1e-139 MKTGSEFHVGIVGLGSMGMGAALSCVRAGLSTWGADLNSNACATLKEAGACGVSDNAATF AEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSSTIASADAQEIATALAGFDL EMLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKII HQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAGNSWMFENRMRHVVDGDYTPHSA VDIFVKDLGLVADTAKALHFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGITLPGA KS >gi|299856449|gb|ADWV01000002.1| GENE 314 334167 - 334934 539 255 aa, chain + ## HITS:1 COG:ygbI KEGG:ns NR:ns ## COG: ygbI COG1349 # Protein_GI_number: 16130642 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 255 11 265 265 460 98.0 1e-130 MIPVERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLEQQGAVVLVSGGVQSPG RVAHEPSHQVKTALAMTQKAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVV TNDFVIANYLLDNSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRG ISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPESASR ALAKQDLSLLVAKNE >gi|299856449|gb|ADWV01000002.1| GENE 315 334985 - 335641 422 218 aa, chain - ## HITS:1 COG:ECs3590 KEGG:ns NR:ns ## COG: ECs3590 COG0639 # Protein_GI_number: 15832844 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Escherichia coli O157:H7 # 1 218 1 218 218 434 97.0 1e-122 MPSTRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFFPETDLLISVGDNIDRGPESL DVLRLLNQPWFISVKGNHEAMALDAFATGDGNMWLASGGDWFFDLNDSEQQEAIDLLLKF HHLPHIIEITNDIIKYVIAHADYPGSEYLFGKEIAESELLWPVDRVQKSLNGELQQINGA DYFIFGHMMFDNIQTFANQIYIDTGSPKSGRLSFYKIR >gi|299856449|gb|ADWV01000002.1| GENE 316 335747 - 338308 3318 853 aa, chain - ## HITS:1 COG:ECs3589 KEGG:ns NR:ns ## COG: ECs3589 COG0249 # Protein_GI_number: 15832843 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Escherichia coli O157:H7 # 1 853 1 853 853 1615 100.0 0 MSAIENFDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGA SAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTIS DEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLY AEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCL LQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVT PMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDFTAELQPVLRQVGDLERILARLALRTA RPRDLARMRHAFQQLPELRAQLETVDSAPVQALREKMGEFAELRDLLERAIIDTPPVLVR DGGVIASGYNEELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQISRG QSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLE ALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANP LNLSPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAA DDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIK ALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAG VPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPR QALEWIYRLKSLV >gi|299856449|gb|ADWV01000002.1| GENE 317 338305 - 338538 102 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300922251|ref|ZP_07138377.1| ## NR: gi|300922251|ref|ZP_07138377.1| conserved domain protein [Escherichia coli MS 182-1] # 1 77 1 77 77 142 98.0 7e-33 MALKEEVYSTDAILRTCFISITQKLQNSIFPGTSIKNSPFASSPEMINSGIMCALCDYNE NKNHHTPFNIREPDITP >gi|299856449|gb|ADWV01000002.1| GENE 318 338595 - 338948 349 117 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3270 NR:ns ## KEGG: ECO103_3270 # Name: ygbA # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 117 1 117 117 200 100.0 1e-50 MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKRLDKCVFGEEKPACKQC PVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKKTRE >gi|299856449|gb|ADWV01000002.1| GENE 319 338985 - 341048 2285 687 aa, chain - ## HITS:1 COG:ECs3587 KEGG:ns NR:ns ## COG: ECs3587 COG3604 # Protein_GI_number: 15832841 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Escherichia coli O157:H7 # 1 687 6 692 692 1361 99.0 0 MSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALADNAAIVLWQAQTQRASYYASR EKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFCETWPQLAAGGLYPKFGHYCLMPL AAEGHIFGGCEFIRYDDRPWSEKEFNRLQTFTQIVSVVTEQIQSRVVNNVDYELLCRERD NFRILVAITNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYSTHYLDK QHPAHEQSEVDEAGTLTERVFKSKEMLLINLHERDDLAPYERMLFDTWGNQIQTLCLLPL MSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKERLVDENL ALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNL SGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDM PLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVF PIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENDI ERAVLLTRGNVLQLSLPDIVLPEPETPPAATVVAQEGEDEYQLIVRVLKETNGVVAGPKG AAQRLGLKRTTLLSRMKRLGIDKSALI >gi|299856449|gb|ADWV01000002.1| GENE 320 341137 - 342147 1198 336 aa, chain - ## HITS:1 COG:ECs3586 KEGG:ns NR:ns ## COG: ECs3586 COG0309 # Protein_GI_number: 15832840 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 15 336 1 322 322 610 99.0 1e-174 MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSY VIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETA RTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWGAQTLTAGDVLLVSGTLGDHG ATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGC GIEISEAALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDA ALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC >gi|299856449|gb|ADWV01000002.1| GENE 321 342144 - 343265 1037 373 aa, chain - ## HITS:1 COG:hypD KEGG:ns NR:ns ## COG: hypD COG0409 # Protein_GI_number: 16130636 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli K12 # 1 373 1 373 373 778 99.0 0 MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPEN VEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVR IVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIP TLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLLQGVVMLV EQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQ RFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGAC AAWYQYRQQESEA >gi|299856449|gb|ADWV01000002.1| GENE 322 343265 - 343537 345 90 aa, chain - ## HITS:1 COG:ECs3584 KEGG:ns NR:ns ## COG: ECs3584 COG0298 # Protein_GI_number: 15832838 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 174 100.0 3e-44 MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVIN EAEARDTLDALQNMFDVEPDVGALLYGEEK >gi|299856449|gb|ADWV01000002.1| GENE 323 343528 - 344400 787 290 aa, chain - ## HITS:1 COG:hypB KEGG:ns NR:ns ## COG: hypB COG0378 # Protein_GI_number: 16130634 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Escherichia coli K12 # 1 290 1 290 290 597 100.0 1e-171 MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIKAPEFTPSQTEEGDLHY GHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAARKQLVLNLVSSPGSGKTTL LTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRL PLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKV DLLPYLNFDVEKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQRCA >gi|299856449|gb|ADWV01000002.1| GENE 324 344404 - 344754 123 116 aa, chain - ## HITS:1 COG:ECs3582 KEGG:ns NR:ns ## COG: ECs3582 COG0375 # Protein_GI_number: 15832836 # Func_class: R General function prediction only # Function: Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) # Organism: Escherichia coli O157:H7 # 1 116 1 116 116 202 100.0 1e-52 MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSLAFCFDLVCRGSVAEGC KLHLEEQEAECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVADDGLQIRRIEIDQE >gi|299856449|gb|ADWV01000002.1| GENE 325 344966 - 345427 408 153 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3263 NR:ns ## KEGG: ECO103_3263 # Name: hycA # Def: formate hydrogenlyase regulatory protein HycA # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 153 1 153 153 309 100.0 2e-83 MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHHAMSCAPDKELCFVLFE HFRIYVTLADGFNSHTIEYYVETKDGEDKQRIAQAQLSIDGMIDGKVNIRDREQVLEHYL EKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA >gi|299856449|gb|ADWV01000002.1| GENE 326 345552 - 346163 321 203 aa, chain + ## HITS:1 COG:ECs3580 KEGG:ns NR:ns ## COG: ECs3580 COG1142 # Protein_GI_number: 15832834 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli O157:H7 # 1 203 1 203 203 360 100.0 1e-100 MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEKESAPQLCHHCEDAPCA VVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPKAPPAP PAPARISTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIARVSKRKR ELTFNTDFGDLTLFQQAQSGEAK >gi|299856449|gb|ADWV01000002.1| GENE 327 346160 - 347986 2145 608 aa, chain + ## HITS:1 COG:ECs3579 KEGG:ns NR:ns ## COG: ECs3579 COG0651 # Protein_GI_number: 15832833 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 # 1 608 1 608 608 996 99.0 0 MSAISLINSGVAWFVAAAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTGAVGV SGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHAQVKCNGLQINMLMAAAVC AVIASNLGMFVVMAEVMALCAVFLTSNSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLD LRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKI GLLGMLTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIL LGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGG IGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAVGL AITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVALAICCVIGGVAAPWLL PMLSAAVPLPLEPANTTVSQPMITLLLIACPLLPFIIMAICKGDRLPSRSRGAAWVCGYD HEKSMVITAHGFAMPVKQAFAPVLKLRKWLNPVSLVPGWQCEGSALLFRRMALVELAVLV VIIVSRGA >gi|299856449|gb|ADWV01000002.1| GENE 328 347989 - 348912 1450 307 aa, chain + ## HITS:1 COG:hycD KEGG:ns NR:ns ## COG: hycD COG0650 # Protein_GI_number: 16130629 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 4 # Organism: Escherichia coli K12 # 1 307 1 307 307 534 99.0 1e-152 MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIFKLLGRQSVGPDAS GWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGS PFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALC ACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFI PWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLA FVSLLAA >gi|299856449|gb|ADWV01000002.1| GENE 329 348930 - 350639 2297 569 aa, chain + ## HITS:1 COG:ECs3577_2 KEGG:ns NR:ns ## COG: ECs3577_2 COG3261 # Protein_GI_number: 15832831 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III large subunit # Organism: Escherichia coli O157:H7 # 158 569 1 412 412 872 100.0 0 MSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQGGWLSVL FGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEVDANKPEYPSVTPRVPAAVWGEREVRD MYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPAPTTDAETYEFINELGDKKNN VVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRV CGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSG FMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKDDMIQTRQLAQQMRREVQELV DVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVH SEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPLMVEGFTYIPHRFALGFAEAPRGD DIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTV VDVRKKKSKVVPYKELERYSIERKNSPLK >gi|299856449|gb|ADWV01000002.1| GENE 330 350649 - 351191 500 180 aa, chain + ## HITS:1 COG:ECs3576 KEGG:ns NR:ns ## COG: ECs3576 COG1143 # Protein_GI_number: 15832830 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Escherichia coli O157:H7 # 1 180 1 180 180 341 98.0 4e-94 MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACPSNALTVEAD LATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFVLCSCRVC NRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKRQKCLVPSDRIELTRHMKEAI >gi|299856449|gb|ADWV01000002.1| GENE 331 351191 - 351958 872 255 aa, chain + ## HITS:1 COG:ECs3575 KEGG:ns NR:ns ## COG: ECs3575 COG3260 # Protein_GI_number: 15832829 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III small subunit # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 529 99.0 1e-150 MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLS PLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGG IFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGEQDEQPA EILHGDMVQPLRVKVDREARRLAGYRYGRQIADDFLTQLGQGEEQVARWLEAENDPRLNE IVSHLNHVVEEARIR >gi|299856449|gb|ADWV01000002.1| GENE 332 351955 - 352365 486 136 aa, chain + ## HITS:1 COG:no KEGG:B21_02533 NR:ns ## KEGG: B21_02533 # Name: hycH # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 136 1 136 136 270 100.0 1e-71 MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDCLEAALTCPWDEYLAWI ATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAAQTSQQQEWSTMLLSMLHD IHQENAIYLMVRRLRD >gi|299856449|gb|ADWV01000002.1| GENE 333 352391 - 352828 607 145 aa, chain + ## HITS:1 COG:ECs3573 KEGG:ns NR:ns ## COG: ECs3573 COG0680 # Protein_GI_number: 15832827 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Escherichia coli O157:H7 # 1 145 12 156 156 281 99.0 4e-76 MMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPENDIVAIRELRPTRLLIVDATDMGLNPG EIRIIDPDDIAEMFMMTTHNMPLNYLIDQLKEDIGEVIFLGIQPDIVGFYYPMTQPIKDA VETVYQRLEGWEGNGGFAQLAVEVE >gi|299856449|gb|ADWV01000002.1| GENE 334 352987 - 354411 1638 474 aa, chain - ## HITS:1 COG:ascB KEGG:ns NR:ns ## COG: ascB COG2723 # Protein_GI_number: 16130623 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Escherichia coli K12 # 1 474 1 474 474 993 98.0 0 MSVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEF YPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEE CKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYARTCFEAFDGLVKYWLTFNE INIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG NFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPAYSARVFREKGVTINKAPGDDEILK NTVDFVSFSYYASRCASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMM YDRYQKPLFLVENGLGAKDELAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWG CIDLVSASTGEMSKRYGFVYVDRDDAGNGTLTRTRKKSFWWYKKVIASNGEDLE >gi|299856449|gb|ADWV01000002.1| GENE 335 354420 - 355877 1830 485 aa, chain - ## HITS:1 COG:ECs3571_2 KEGG:ns NR:ns ## COG: ECs3571_2 COG1263 # Protein_GI_number: 15832825 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 91 485 2 396 396 654 99.0 0 MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDQLIDSPTLKTIPGVLGVVRSD NQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTLRRIGAGILDALIGTMSPLIPA IIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFFLPLMVAASAAIKFKTNMSLA IAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYTYTVIPALVMTWCLSYIERWVDR ITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGSAISALVYTIHGYLGWLSVAIMGAL WPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSEIGANLSLGGSSLAVAWKTKNPELRQT ALAAAASAIMAGISEPALYGVAIRLKRPLIASLISGFICGAVAGMAGLASHSMAAPGLFT SVQFFDPANPMSIVWVFAVMALAVVLSFILTLLLGFEDIPVEEAAAEARKHQSAQPTVAK EVSLN >gi|299856449|gb|ADWV01000002.1| GENE 336 356137 - 357147 883 336 aa, chain + ## HITS:1 COG:ECs3570 KEGG:ns NR:ns ## COG: ECs3570 COG1609 # Protein_GI_number: 15832824 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 336 2 337 337 658 99.0 0 MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESGYRPNLLARNLSAKSTQ TLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDA IMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQ EIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANGKWTPASGAEGVETLLERGAK FSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFDDIAIAPYTVPALSSVKIPVTEMIQ EIIGRLIFMLDGGDFSPPKTFSGKLIRRDSLIALSR >gi|299856449|gb|ADWV01000002.1| GENE 337 357296 - 357823 415 175 aa, chain + ## HITS:1 COG:ECs3569 KEGG:ns NR:ns ## COG: ECs3569 COG1142 # Protein_GI_number: 15832823 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli O157:H7 # 1 175 1 175 175 302 100.0 2e-82 MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQ CEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLN VRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF >gi|299856449|gb|ADWV01000002.1| GENE 338 357976 - 360228 1684 750 aa, chain + ## HITS:1 COG:hypF KEGG:ns NR:ns ## COG: hypF COG0068 # Protein_GI_number: 16130619 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Escherichia coli K12 # 1 750 1 750 750 1429 98.0 0 MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLLEDPETFLVQ LHQHCPPLARIDSVEREPFIWSQLPTEFTIRQSAGGAMNTQIVPDAATCPACLAEMNTPG ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAEFPLCPACDKEYRDPLDRRFHAQPVA CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAIKGIGGFHLACDARNSTAVATLR ARKHRPAKPLAVILPVAEGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPGLNEVGVM LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMD DSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG DLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHA AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD LAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRLFDA VAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPLVDNQLDLATFWQQWLNWQAP VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP QSLPAGDGGLSLGQGVIAAARWLAGEVQNG >gi|299856449|gb|ADWV01000002.1| GENE 339 360454 - 361587 999 377 aa, chain - ## HITS:1 COG:ygbD KEGG:ns NR:ns ## COG: ygbD COG0446 # Protein_GI_number: 16130618 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 377 1 377 377 723 99.0 0 MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKPDLSHVISQGQRADDLT RQTAGEFAEQFNLHLFPQTWVTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRE LMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDFCRAGKAVTLIDNAASILASL MPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGILATLDRQRSIEVDAVIAATGLRPE TALARRAGLTINRGVCVDSYLQTSNADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNLL GNNTPLKLPAMLVKIKTPELPLHLAGETQRQDLRWQINTERQGMVARGVDDADQLRAFVV SEDRMKEAFGLLKTLPM >gi|299856449|gb|ADWV01000002.1| GENE 340 361584 - 363023 1406 479 aa, chain - ## HITS:1 COG:ygaK_1 KEGG:ns NR:ns ## COG: ygaK_1 COG0426 # Protein_GI_number: 16130617 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Escherichia coli K12 # 1 394 1 394 394 828 99.0 0 MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEKNVLIDTVDHKFSREFV QNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYCTANAIDSINGHHHHPEWN FNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDAVLFSNDAFGQHYCDEHLFND EVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNLPVDMIATSHGVVWRDNPTQIVE LYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGIAETDPRVAVKIFNVARSDKNEILT NVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLRFRNKRASAFGSHGWSGGAVDRLSTRL QDAGFEMSLSLKAKWRPDQDALELCREHGREIARQWALAPLPQSTVNTVVKEETSATTTA DLGPRMQCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFEELASEAK >gi|299856449|gb|ADWV01000002.1| GENE 341 363210 - 364724 1525 504 aa, chain + ## HITS:1 COG:ECs3565 KEGG:ns NR:ns ## COG: ECs3565 COG3604 # Protein_GI_number: 15832819 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Escherichia coli O157:H7 # 1 504 26 529 529 931 98.0 0 MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLA KDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFA GQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMMPGDATPFE AVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLV YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLL RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRE RGDDVILLAGYFCEQCRLRLGLSRVVLSAGARNLLQHYRFPGNVRELEHAIHRAVVLSRA TRNGDEVILEAQHFAFPEVTLPPPEAAAVPVVKQNLREATEAFQRETIRQALAQNHHNWA ACARMLETDVANLHRLAKRLGMKD >gi|299856449|gb|ADWV01000002.1| GENE 342 364721 - 365686 1199 321 aa, chain - ## HITS:1 COG:gutQ_1 KEGG:ns NR:ns ## COG: gutQ_1 COG0794 # Protein_GI_number: 16130615 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Escherichia coli K12 # 14 205 1 192 192 363 100.0 1e-100 MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKI AATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALL AMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEE DFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQ QVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVV DENGKLTGAINLQDFYQAGII >gi|299856449|gb|ADWV01000002.1| GENE 343 365679 - 366452 685 257 aa, chain - ## HITS:1 COG:srlR KEGG:ns NR:ns ## COG: srlR COG1349 # Protein_GI_number: 16130614 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 257 1 257 257 504 100.0 1e-143 MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNK EESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMT NSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNA GVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQ ALEEKGIDVIITGESNE >gi|299856449|gb|ADWV01000002.1| GENE 344 366519 - 366878 317 119 aa, chain - ## HITS:1 COG:gutM KEGG:ns NR:ns ## COG: gutM COG4578 # Protein_GI_number: 16130613 # Func_class: K Transcription # Function: Glucitol operon activator # Organism: Escherichia coli K12 # 1 119 1 119 119 231 100.0 2e-61 MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALD DQQRIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG >gi|299856449|gb|ADWV01000002.1| GENE 345 366984 - 367763 883 259 aa, chain - ## HITS:1 COG:srlD KEGG:ns NR:ns ## COG: srlD COG1028 # Protein_GI_number: 16130612 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 259 1 259 259 493 100.0 1e-139 MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGA DATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCA REFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVH SLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASP KASYCTGQSINVTGGQVMF >gi|299856449|gb|ADWV01000002.1| GENE 346 367767 - 368138 248 123 aa, chain - ## HITS:1 COG:srlB KEGG:ns NR:ns ## COG: srlB COG3731 # Protein_GI_number: 16130611 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Escherichia coli K12 # 1 123 1 123 123 246 99.0 9e-66 MTVIYQTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHCHGELKGALHPGLQFSL GQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHVAGPVPDDIAPGSVLKFES VKE >gi|299856449|gb|ADWV01000002.1| GENE 347 368149 - 369108 1088 319 aa, chain - ## HITS:1 COG:srlE KEGG:ns NR:ns ## COG: srlE COG3732 # Protein_GI_number: 16130610 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIBC # Organism: Escherichia coli K12 # 1 319 1 319 319 590 99.0 1e-168 MTHIRIEKGTGGWGGPLELKATPGKKIVYITAGTRPAIVDKLAQLTGWQAIDGFKEGEPA EAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITVV GDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVAVLFQSGRDTIDTVLKTILPF MAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLALICSFPLLSPFLGPGAVIAQVI GVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEARQDTVRVGVPSVLVSRF LTGAPTVLIAWFVSGFIYQ >gi|299856449|gb|ADWV01000002.1| GENE 348 369105 - 369668 663 187 aa, chain - ## HITS:1 COG:srlA KEGG:ns NR:ns ## COG: srlA COG3730 # Protein_GI_number: 16130609 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIC # Organism: Escherichia coli K12 # 1 187 1 187 187 364 99.0 1e-101 MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNALINFIGQHRIERFAQRC AGNPVSRYLLLPCIGTFVFCNPMTLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPG ELFVYLGIASGLTTLNLPLGPLAVSYLLVGLVTNFFRGWVTDLTTAIFEKKMGIQLEQKV HLAGATS >gi|299856449|gb|ADWV01000002.1| GENE 349 369924 - 371009 1083 361 aa, chain + ## HITS:1 COG:mltB KEGG:ns NR:ns ## COG: mltB COG2951 # Protein_GI_number: 16130608 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Escherichia coli K12 # 1 361 1 361 361 717 100.0 0 MFKRRYVTLLPLFVLLAACSSKPKPTETDTTTGTPSGGFLLEPQHNVMQMGGDFANNPNA QQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTTSVKPPSGPNGAWLRYRKK FITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALAT LSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSG DGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMANGQAPGLPNGFKTKYSISQLAAAGL TPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAVALARV Q >gi|299856449|gb|ADWV01000002.1| GENE 350 371154 - 371651 301 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 8 157 748 898 904 120 46 8e-26 MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAGSSAWFERGFVTYSNEA KAQMIGVREETLAQHGAVSEPVVVEMAIGALKAARADYAVSISGIAGPDGGSEEKPVGTV WFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQFLQNT >gi|299856449|gb|ADWV01000002.1| GENE 351 371731 - 372792 1492 353 aa, chain + ## HITS:1 COG:ECs3556 KEGG:ns NR:ns ## COG: ECs3556 COG0468 # Protein_GI_number: 15832810 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Escherichia coli O157:H7 # 1 353 1 353 353 666 100.0 0 MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQP DTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIG QGKANATAWLKDNPETAKEIEKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF >gi|299856449|gb|ADWV01000002.1| GENE 352 373035 - 373535 583 166 aa, chain + ## HITS:1 COG:ECs3555 KEGG:ns NR:ns ## COG: ECs3555 COG2137 # Protein_GI_number: 15832809 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 166 1 166 166 311 100.0 3e-85 MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVI AWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCAL ARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIWRNFAD >gi|299856449|gb|ADWV01000002.1| GENE 353 373576 - 373758 146 60 aa, chain - ## HITS:1 COG:no KEGG:ECSP_3645 NR:ns ## KEGG: ECSP_3645 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 60 74 133 133 117 100.0 1e-25 MGYQGAAGNYLMSLTMEKVEKRLTDLSGALAHNYPEIKLTKYRHQLQRVLTAGLVTEKWE >gi|299856449|gb|ADWV01000002.1| GENE 354 373663 - 376293 2999 876 aa, chain + ## HITS:1 COG:ECs3554 KEGG:ns NR:ns ## COG: ECs3554 COG0013 # Protein_GI_number: 15832808 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 876 1 876 876 1718 99.0 0 MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYS RATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKW FALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCG PCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMG LERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADGVM PSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVL KTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKV DEAGFEAAMEEQRRRAREASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAV DAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLAAG SLKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSH NEAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGD FSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHL LKGDSNNLADKVRSVLERTRQLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSG VEPKMLRTMVDDLKNQLGSTIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVG GKGGGRPDMAQAGGTDAAALPGALASVKGWVSAKLQ >gi|299856449|gb|ADWV01000002.1| GENE 355 376528 - 376713 204 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855109|ref|ZP_02477881.1| 30S ribosomal protein S1 [Haemophilus parasuis 29755] # 1 60 1 60 61 83 61 1e-14 MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQSS Y >gi|299856449|gb|ADWV01000002.1| GENE 356 378306 - 378872 542 188 aa, chain + ## HITS:1 COG:ECs3552 KEGG:ns NR:ns ## COG: ECs3552 COG0637 # Protein_GI_number: 15832806 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 372 100.0 1e-103 MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMIALNGSPTWRIAQAIIE LNQADLDPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGRRPMAVGTGSESAIAEALL AHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGM DAVDVRLL >gi|299856449|gb|ADWV01000002.1| GENE 357 379013 - 379297 261 94 aa, chain + ## HITS:1 COG:yqaA KEGG:ns NR:ns ## COG: yqaA COG1238 # Protein_GI_number: 16130601 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 94 49 142 142 163 100.0 7e-41 MGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLCLLAGWM RISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH >gi|299856449|gb|ADWV01000002.1| GENE 358 379370 - 380926 1798 518 aa, chain + ## HITS:1 COG:gshA KEGG:ns NR:ns ## COG: gshA COG2918 # Protein_GI_number: 16130600 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Escherichia coli K12 # 1 518 1 518 518 1084 100.0 0 MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGHPEALGSALTHKWITTD FAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPLSMPCYIAEGQDIELAQYG TSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFWQAKCGDISGADAKEKISAGY FRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPFEKTECGMYYLPYATSLRLSDLG YTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAKIGIEKDGKRLQINSNVLQIENELY APIRPKRVTRSGESPSDALLRGGIEYIEVRSLDINPFSPIGVDEQQVRFLDLFMVWCALA DAPEMSSSELACTRVNWNRVILEGRKPGLTLGIGCETAQFPLPQVGKDLFRDLKRVAQTL DSINGGEAYQKVCDELVACFDNPDLTFSARILRSMIDTGIGGTGKAFAEAYRNLLREEPL EILREEDFVAEREASERRQQEMEAADTEPFAVWLEKHA >gi|299856449|gb|ADWV01000002.1| GENE 359 381076 - 381591 582 171 aa, chain + ## HITS:1 COG:luxS KEGG:ns NR:ns ## COG: luxS COG1854 # Protein_GI_number: 16130599 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Escherichia coli K12 # 1 171 1 171 171 349 99.0 2e-96 MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLF AGFMRNHLNGKGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQI PELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQELHI >gi|299856449|gb|ADWV01000002.1| GENE 360 381655 - 383193 1618 512 aa, chain - ## HITS:1 COG:STM2815 KEGG:ns NR:ns ## COG: STM2815 COG0477 # Protein_GI_number: 16766126 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 502 1 502 512 907 95.0 0 MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGV ANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSLNMLIFFRVIQGIVAGPLI PLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPIGVA VVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQIMLDRGKELDWFSSQEIIILTVV AVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYG YTATWAGLASAPVGIIPVILSPIIGRFAHKLDMRRLVTFSFIMYAVCFYWRAYTFEPGMD FGASAWPQFIQGFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITTTM WTNRESMHHAQLTESVNPFNPNAQAMYSQLEGLGMTQQQASGWIAQQITNQGLIISANEI FWMSAGIFLVLLGLVWFAKPPFGAGGGGGGAH >gi|299856449|gb|ADWV01000002.1| GENE 361 383210 - 384382 1218 390 aa, chain - ## HITS:1 COG:emrA KEGG:ns NR:ns ## COG: emrA COG1566 # Protein_GI_number: 16130597 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 390 1 390 390 689 99.0 0 MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFLVLRHFEETDDAYVAGN QIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMI NSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQ YNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIVSPMTGYVSRRAVQPGAQISPT TPLMAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAF SLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDGQVLANKVR STPVAVSTAREISLAPVNKLIDDIVKANAG >gi|299856449|gb|ADWV01000002.1| GENE 362 384509 - 385039 548 176 aa, chain - ## HITS:1 COG:ECs3546 KEGG:ns NR:ns ## COG: ECs3546 COG1846 # Protein_GI_number: 15832800 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 306 100.0 2e-83 MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMA LITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEK GHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS >gi|299856449|gb|ADWV01000002.1| GENE 363 385130 - 385465 368 111 aa, chain - ## HITS:1 COG:no KEGG:B21_02503 NR:ns ## KEGG: B21_02503 # Name: ygaH # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 111 1 111 111 176 100.0 2e-43 MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLDTIGIASICALLVVSTA PEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYGLAWKVMAII >gi|299856449|gb|ADWV01000002.1| GENE 364 385455 - 386192 565 245 aa, chain - ## HITS:1 COG:ygaZ KEGG:ns NR:ns ## COG: ygaZ COG1296 # Protein_GI_number: 16130594 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Escherichia coli K12 # 1 245 1 245 245 432 99.0 1e-121 MESPTPQPAPGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLGFSPLESVFFSCIIYAG ASQFVITAMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRIIQRLQKSKTALWAFGLTDE VFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGAFSGSGLLQGYPAVEAALGFM LPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIPVAILAGIVCGCLTALIQAFWQG APDEL >gi|299856449|gb|ADWV01000002.1| GENE 365 386316 - 387500 1191 394 aa, chain - ## HITS:1 COG:ECs3543 KEGG:ns NR:ns ## COG: ECs3543 COG0477 # Protein_GI_number: 15832797 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 394 1 394 394 621 99.0 1e-178 MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLSASSAGFIVTAAQLGYA AGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMMILGTALTGLFSVVAQILV PLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASVLMALMALA LWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRALLGCLTFANFSILWTSMAFLLAA PPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKSHHTTTFGLLLLLLSWLAIWFGHTS VLALIIGILVLDLTVQGVHITNQTVIYRIHPDARNRLTAGYMTSYFIGGAAGSLISASAW QHGGWAGVCLAGATIALVNLLVWWRGFHRQEAAN >gi|299856449|gb|ADWV01000002.1| GENE 366 387791 - 388783 1128 330 aa, chain - ## HITS:1 COG:ECs3542 KEGG:ns NR:ns ## COG: ECs3542 COG2113 # Protein_GI_number: 15832796 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Escherichia coli O157:H7 # 1 330 1 330 330 652 99.0 0 MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQTLLVSRALEKLGYTVN KPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLID KKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEGAINHQLAAYELTNTV THNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNA DTKLPNGANYGFPVSTMHIVANKAWTEKNPAAAKLFAIMQLPVADINAQNAIMHDGKASE GDIQGHVDGWIKAHQQQFDGWVNEALAAQK >gi|299856449|gb|ADWV01000002.1| GENE 367 388840 - 389904 1267 354 aa, chain - ## HITS:1 COG:ECs3541 KEGG:ns NR:ns ## COG: ECs3541 COG4176 # Protein_GI_number: 15832795 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 354 1 354 354 582 99.0 1e-166 MADQNNPWDTTPAADSAVQSADAWGTPATAPTDGGGADWLTSTPAPNVEHFNILDPFHKT LIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLLGMPAPVAIIVFALIAWQI SGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPRAAKII RPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEA SRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGR LDMGLATVGGVGIVILAIILDRLTQAVGRDSRSRGNRRWYTTGPVGLLTRPFIK >gi|299856449|gb|ADWV01000002.1| GENE 368 389897 - 391099 1223 400 aa, chain - ## HITS:1 COG:proV KEGG:ns NR:ns ## COG: proV COG4175 # Protein_GI_number: 16130591 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, ATPase component # Organism: Escherichia coli K12 # 1 400 1 400 400 764 100.0 0 MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIM GLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPH MTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARALA INPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQN GEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSAKDIARRTPNGLIRKTPGFGPRSAL KLLQDEDREYGYVIERGNKFVGAVSIDSLKTALTQQQGLDAALIDAPLAVDAQTPLSELL SHVGQAPCAVPVVDEDQQYVGIISKGMLLRALDREGVNNG >gi|299856449|gb|ADWV01000002.1| GENE 369 391454 - 392413 987 319 aa, chain - ## HITS:1 COG:nrdF KEGG:ns NR:ns ## COG: nrdF COG0208 # Protein_GI_number: 16130590 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Escherichia coli K12 # 1 319 1 319 319 633 99.0 0 MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVF TGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDA AYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTN TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL YAETPWADDVKAFLCYNANKALMNLDYEPLFPAEMAEVNPAILAALSPNADENHDFFSGS GSSYVMGKAVETEDEDWNF >gi|299856449|gb|ADWV01000002.1| GENE 370 392423 - 394528 2057 701 aa, chain - ## HITS:1 COG:ECs3538 KEGG:ns NR:ns ## COG: ECs3538 COG0209 # Protein_GI_number: 15832792 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 701 14 714 714 1421 98.0 0 MDYHALNAMLNLYDSAGRIQFDKDRQAVDAFMATHVRPNSVTFSSQQQRLNWLVNEGYYD ESVLNRYSRDFVITLFAHAHTSGFRFHTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMV ALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRA VNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQG AGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYD VERVYGKPFADIAISEHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVN RANPIAGRINMSNLCSEILQVNSASEYDENLDYARTGHDISCNLGSLNIAHTMDSPNFAR TVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDF TNLYFYTITWHALRTSMLLARERGETFAGFKQSRYASSEYFSQYLQGNWQPKTTKVGELF ARSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRK EGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATT RDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL >gi|299856449|gb|ADWV01000002.1| GENE 371 394540 - 394950 250 136 aa, chain - ## HITS:1 COG:ECs3537 KEGG:ns NR:ns ## COG: ECs3537 COG1780 # Protein_GI_number: 15832791 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 268 99.0 3e-72 MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPR QVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIAQKCGVPWLYRFELMGTQSDIEN VRKGVTEFWQRQPQNA >gi|299856449|gb|ADWV01000002.1| GENE 372 394947 - 395192 291 81 aa, chain - ## HITS:1 COG:ECs3536 KEGG:ns NR:ns ## COG: ECs3536 COG0695 # Protein_GI_number: 15832790 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Escherichia coli O157:H7 # 1 81 1 81 81 164 100.0 4e-41 MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALRAQGFRQLPVVIAGDLS WSGFRPDMINRLHPAPHAASA >gi|299856449|gb|ADWV01000002.1| GENE 373 395440 - 395769 256 109 aa, chain - ## HITS:1 COG:ECs3533 KEGG:ns NR:ns ## COG: ECs3533 COG4575 # Protein_GI_number: 15832787 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 109 5 113 113 192 100.0 2e-49 MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRAR MHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS >gi|299856449|gb|ADWV01000002.1| GENE 374 395921 - 396265 361 114 aa, chain + ## HITS:1 COG:no KEGG:G2583_3317 NR:ns ## KEGG: G2583_3317 # Name: ygaC # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 114 1 114 114 221 100.0 8e-57 MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARMGRTALVIHPTLKERSS TLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVALERYLNGLFGEAS >gi|299856449|gb|ADWV01000002.1| GENE 375 396302 - 396751 412 149 aa, chain - ## HITS:1 COG:no KEGG:ECSP_3616 NR:ns ## KEGG: ECSP_3616 # Name: ygaW # Def: predicted inner membrane protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 149 1 149 149 269 100.0 2e-71 MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYSRLVAIPVNILIAWPYG MYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLVVGADWHQIMAAVSSNIVV SMLMGAVYGYFLDYCRRLFKVSRYQQVKA >gi|299856449|gb|ADWV01000002.1| GENE 376 397419 - 397823 487 134 aa, chain + ## HITS:1 COG:ECs3530 KEGG:ns NR:ns ## COG: ECs3530 COG2916 # Protein_GI_number: 15832784 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Escherichia coli O157:H7 # 1 134 1 134 134 213 100.0 1e-55 MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKIST WLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIA QALAEGKSLDDFLI >gi|299856449|gb|ADWV01000002.1| GENE 377 397870 - 398394 346 174 aa, chain - ## HITS:1 COG:ygaP KEGG:ns NR:ns ## COG: ygaP COG0607 # Protein_GI_number: 16130582 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 174 1 174 174 335 98.0 3e-92 MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPPKLRREQI IFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKRAGLPVAVNKSQPLPLMRQVQIA AGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCGMARLLDKMPWNQRA >gi|299856449|gb|ADWV01000002.1| GENE 378 398404 - 398703 324 99 aa, chain - ## HITS:1 COG:ygaV KEGG:ns NR:ns ## COG: ygaV COG0640 # Protein_GI_number: 16130581 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 99 1 99 99 162 100.0 2e-40 MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLA RMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP >gi|299856449|gb|ADWV01000002.1| GENE 379 398886 - 399044 234 52 aa, chain + ## HITS:1 COG:ECs3527 KEGG:ns NR:ns ## COG: ECs3527 COG0401 # Protein_GI_number: 15832781 # Func_class: S Function unknown # Function: Uncharacterized homolog of Blt101 # Organism: Escherichia coli O157:H7 # 1 52 1 52 52 77 100.0 6e-15 MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIHAFWVQTRD >gi|299856449|gb|ADWV01000002.1| GENE 380 399128 - 399577 526 149 aa, chain + ## HITS:1 COG:ECs3526 KEGG:ns NR:ns ## COG: ECs3526 COG1652 # Protein_GI_number: 15832780 # Func_class: S Function unknown # Function: Uncharacterized protein containing LysM domain # Organism: Escherichia coli O157:H7 # 1 149 1 149 149 266 100.0 7e-72 MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLSKTGIPDADKVNIQIADGKATVTGD GLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVKSGDTLSAISKQVYGNANL YNKIFEANKPMLKSPDKIYPGQVLRIPEE >gi|299856449|gb|ADWV01000002.1| GENE 381 399578 - 400240 810 220 aa, chain - ## HITS:1 COG:ECs3525 KEGG:ns NR:ns ## COG: ECs3525 COG1802 # Protein_GI_number: 15832779 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 220 7 226 226 407 99.0 1e-114 MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVN QKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDAS EKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKH DQRQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN >gi|299856449|gb|ADWV01000002.1| GENE 382 400261 - 401661 1515 466 aa, chain - ## HITS:1 COG:gabP KEGG:ns NR:ns ## COG: gabP COG1113 # Protein_GI_number: 16130577 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 1 466 1 466 466 824 100.0 0 MGQSSQPHELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVM IMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAMILHSW VPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYPY AEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNS VIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSC LNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVF KFLIDSSGAIALLVYLVIAVSQLRMRKILRAEGSEIRLRMWLYPWLTWLVIGFITFVLVV MLFRPAQQLEVISTGLLAIGIICTVPIMARWKKLVLWQKTPVHNTR >gi|299856449|gb|ADWV01000002.1| GENE 383 401975 - 403255 1392 426 aa, chain - ## HITS:1 COG:ECs3523 KEGG:ns NR:ns ## COG: ECs3523 COG0160 # Protein_GI_number: 15832777 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Escherichia coli O157:H7 # 1 426 1 426 426 845 99.0 0 MSSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHP KVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVK IARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISE DDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE VQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAG NPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELF EDGDHSKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQC FAEAKQ >gi|299856449|gb|ADWV01000002.1| GENE 384 403269 - 404717 1859 482 aa, chain - ## HITS:1 COG:ECs3522 KEGG:ns NR:ns ## COG: ECs3522 COG1012 # Protein_GI_number: 15832776 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 482 1 482 482 944 99.0 0 MKLNASNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRA LPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK PASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG VYDRFAEKLQQAVSKLHIGDGLDKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA DERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL >gi|299856449|gb|ADWV01000002.1| GENE 385 404740 - 406008 1100 422 aa, chain - ## HITS:1 COG:ECs3521 KEGG:ns NR:ns ## COG: ECs3521 COG0579 # Protein_GI_number: 15832775 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli O157:H7 # 1 422 23 444 444 848 99.0 0 MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTGHNSGVIHAGVYYTPGS LKAQFCLAGNRATKAFCDQNDIRYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLN AEELREREPNITGLGGIFVPSSGIVSYREVTAAMAKIFQARGGEIIYNAEVSGLSEHKSG VVIRTRQGGDYEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHL IYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRR VLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDF LFVTTPRTIHTCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAF NQ >gi|299856449|gb|ADWV01000002.1| GENE 386 406028 - 407005 1059 325 aa, chain - ## HITS:1 COG:no KEGG:ECSE_2912 NR:ns ## KEGG: ECSE_2912 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 325 36 360 360 643 100.0 0 MNALTAVHNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYK SFLRFRVGKILDDLCANQLQPLLLKTLLNRAEGALLINAVGIDDVAQADEMVKLATAVAH LIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEITDYVLMMKIDE QNMQGGNSLLLHLDDWEHLDHYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPV MRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPH PDLRRELMRQRGYFAYATHHYQTHQ >gi|299856449|gb|ADWV01000002.1| GENE 387 407341 - 407505 59 54 aa, chain - ## HITS:1 COG:ECs3519 KEGG:ns NR:ns ## COG: ECs3519 COG0366 # Protein_GI_number: 15832773 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 54 282 335 335 103 94.0 1e-22 MGSNSVNIIINNTRKIIPPGKVFTLRGGTLNINIPGRSALLLGKTGEPPNYLYL >gi|299856449|gb|ADWV01000002.1| GENE 388 407948 - 409594 501 548 aa, chain - ## HITS:1 COG:ECs3518 KEGG:ns NR:ns ## COG: ECs3518 COG0366 # Protein_GI_number: 15832772 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 412 1 412 412 815 96.0 0 MFSIKPGPRNLPIDNPTLLSWNITDGDLNSKLNTLEYLNCITNIINSCGVYPQGLKDREI ISTFHEEKVINDLLKNDYKISLSPDTTYRELNKAAQRSITAPDRIGEGKSWVYQRDTMIE RGDNSGVHQYGPAEHFTHIISDKPSPKDEYIAYAINIPDYELAADVYNINVTSPSEQQET FKILINPEHLRQTLERKSLTAVQKSQCEIITPKKPGEAILHAFNATYQQIRENMSEFARC HYGYIQIPPVTTFRADGPETPEEEKGYWFHAYQPEDLCTIHNPMGDLQDFIALVKDAKKF GIDIIPDYTFNFMGIGGSGKNDLDYPSADIRAKISKDIEGGIPGYWQGQVLIPFIKDPVT KERKQIHPEDIHLTAKDFEASKDNISKDEWENLHALKEKRLNGMPKTTPKSDQVIMLQNQ YVREMRKYGVRGLRYDAAKHSKHEQIERSITPPLKNYNERLHNTNLFNPKYQKKAVMNYM EYLVTCQLDEQQMSSLLYERDDLSAIDFSLLMKTIKAFSFDGDLQTLASKPGSTISSIPS ERRILINH >gi|299856449|gb|ADWV01000002.1| GENE 389 410328 - 411173 472 281 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_1409 NR:ns ## KEGG: ECH74115_1409 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 279 1 279 280 551 94.0 1e-155 MSDITASRPEVVNGHTDVICSTSIRHILAVRKSTLLQINTLIRQLAEISAMTESIGGKTA LDWAMKQDFRCGCWLMEKPETAMKAITHNLDREIWRDLMQRSGMLSLMDAQARETWYRSL EYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLNWNYKTNCPCKFGSKIIVNNL VRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNRENITIRLDEHIQSVQGKESYED EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKRYPGQLSAI >gi|299856449|gb|ADWV01000002.1| GENE 390 411270 - 411467 125 65 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4897 NR:ns ## KEGG: EC55989_4897 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 65 125 189 189 115 89.0 3e-25 MKSLTTETALDILIAWLQDNIDCESGIIFDNDEDKTDSTALLSCIEQAREDIRTLRQLQL QPPNR >gi|299856449|gb|ADWV01000002.1| GENE 391 411479 - 411967 325 162 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_5037 NR:ns ## KEGG: ECH74115_5037 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 162 2 163 163 304 92.0 7e-82 MQLTLTLEADSVNVQALNMGRIVVDIDGVNLAELINMICDNGYSLRVVDESDRTSADCTP PFAALTGIRCSTAHITETDNTWLYSLSHQTNDTGESEWIHFTGRGYLLRTDALSYPVLHL KRLGLSKTFRRLVVTLIRRYGVSLIHLDASAGCLPDLPTFDW >gi|299856449|gb|ADWV01000002.1| GENE 392 411958 - 412341 256 127 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_3353 NR:ns ## KEGG: EcE24377A_3353 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 125 1 125 125 243 96.0 1e-63 MKTLPVLPGQAASSRPSPVEIWQTLLTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLC DAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKH QESKRCN >gi|299856449|gb|ADWV01000002.1| GENE 393 412431 - 412799 149 122 aa, chain - ## HITS:1 COG:no KEGG:ECB_02807 NR:ns ## KEGG: ECB_02807 # Name: yeeU # Def: antitoxin of the YeeV-YeeU toxin-antitoxin system # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 121 232 352 353 242 91.0 3e-63 MSDTLPGTTHPDNNNDRPWWGLPCTVTPCFGARLVQEGNRLHYLTDRAGIRGRFSDADAN HLDQAFPLLMKQLELMLTSSELNPHRQNTVTLYVKGLTCHADTLGSCGYVYLAVYPTPEM KN >gi|299856449|gb|ADWV01000002.1| GENE 394 412879 - 413100 311 73 aa, chain - ## HITS:1 COG:no KEGG:ECS88_3313 NR:ns ## KEGG: ECS88_3313 # Name: yeeT # Def: conserved hypothetical protein; CP4-44 prophage # Organism: E.coli_S88 # Pathway: not_defined # 1 73 1 73 73 150 100.0 1e-35 MKIITRGEAMRIHQQHPASRLFPFCTGKYRWHGSTEAYTGREVQDIPGVLAVFAERRKDS FGPYVRLMSVTLN >gi|299856449|gb|ADWV01000002.1| GENE 395 413169 - 413645 465 158 aa, chain - ## HITS:1 COG:ECs2803 KEGG:ns NR:ns ## COG: ECs2803 COG2003 # Protein_GI_number: 15832057 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 295 97.0 2e-80 MQQLSFLPGEMTPGERSLIQRALKTLDRHLHEPGVAFTSTHAAREWLILNMAGLEREEFR VLYLNNQNQLIADETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKAD RLITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL >gi|299856449|gb|ADWV01000002.1| GENE 396 413661 - 414053 286 130 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4894 NR:ns ## KEGG: ECS88_4894 # Name: not_defined # Def: conserved hypothetical protein; putative antirestriction protein # Organism: E.coli_S88 # Pathway: not_defined # 1 130 155 284 284 262 98.0 2e-69 PDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAFMAPEPDD DDDETWVLFSAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHP ECNAIMRIID Prediction of potential genes in microbial genomes Time: Sun May 15 15:05:24 2011 Seq name: gi|299856448|gb|ADWV01000003.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont2.1, whole genome shotgun sequence Length of sequence - 290170 bp Number of predicted genes - 259, with homology - 258 Number of transcription units - 131, operones - 66 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 206 127 ## COG1662 Transposase and inactivated derivatives, IS1 family 2 2 Op 1 6/0.122 + CDS 378 - 707 170 ## COG1479 Uncharacterized conserved protein 3 2 Op 2 . + CDS 797 - 2278 1286 ## COG1479 Uncharacterized conserved protein - Term 2279 - 2319 8.5 4 3 Tu 1 . - CDS 2325 - 2666 499 ## APECO1_2079 endoribonuclease SymE - Prom 2785 - 2844 4.0 - Term 2831 - 2859 1.0 5 4 Op 1 27/0.000 - CDS 2887 - 4638 802 ## COG0732 Restriction endonuclease S subunits 6 4 Op 2 5/0.286 - CDS 4638 - 6107 1759 ## COG0286 Type I restriction-modification system methyltransferase subunit - Term 6117 - 6159 10.2 7 4 Op 3 . - CDS 6174 - 7070 1054 ## COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases - Prom 7101 - 7160 2.2 8 5 Op 1 . - CDS 7175 - 7879 394 ## COG3316 Transposase and inactivated derivatives - Term 7888 - 7923 2.0 9 5 Op 2 . - CDS 7926 - 9434 1395 ## COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases - Prom 9458 - 9517 5.2 + Prom 9459 - 9518 4.3 10 6 Op 1 . + CDS 9575 - 10543 185 ## ECO26_5543 hypothetical protein 11 6 Op 2 . + CDS 10583 - 10774 139 ## COG3514 Uncharacterized protein conserved in bacteria - Term 10764 - 10823 2.2 12 7 Op 1 3/0.653 - CDS 10861 - 11817 1081 ## COG0523 Putative GTPases (G3E family) 13 7 Op 2 9/0.020 - CDS 11828 - 12031 241 ## COG2879 Uncharacterized small protein - Term 12111 - 12157 0.5 14 8 Tu 1 . - CDS 12162 - 14327 2721 ## COG1966 Carbon starvation protein, predicted membrane protein - Prom 14572 - 14631 3.1 - Term 14660 - 14698 6.6 15 9 Op 1 4/0.510 - CDS 14705 - 15217 616 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 16 9 Op 2 . - CDS 15235 - 16797 1744 ## COG2368 Aromatic ring hydroxylase - Prom 16854 - 16913 2.6 - Term 16966 - 17005 5.3 17 10 Op 1 5/0.286 - CDS 17048 - 17938 735 ## COG2207 AraC-type DNA-binding domain-containing proteins 18 10 Op 2 6/0.122 - CDS 17948 - 19324 1371 ## COG0477 Permeases of the major facilitator superfamily - Term 19352 - 19386 0.3 19 11 Op 1 5/0.286 - CDS 19499 - 20287 1151 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 20 11 Op 2 2/0.755 - CDS 20298 - 21101 1032 ## COG3971 2-keto-4-pentenoate hydratase 21 12 Op 1 4/0.510 - CDS 21212 - 21592 505 ## COG3232 5-carboxymethyl-2-hydroxymuconate isomerase 22 12 Op 2 4/0.510 - CDS 21602 - 22453 920 ## COG3384 Uncharacterized conserved protein 23 12 Op 3 3/0.653 - CDS 22455 - 23921 1677 ## COG1012 NAD-dependent aldehyde dehydrogenases 24 12 Op 4 . - CDS 23918 - 25207 1300 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) - Prom 25269 - 25328 6.8 + Prom 25293 - 25352 8.2 25 13 Tu 1 . + CDS 25479 - 25925 435 ## COG1846 Transcriptional regulators + Prom 25940 - 25999 2.1 26 14 Tu 1 . + CDS 26044 - 27708 1635 ## COG0840 Methyl-accepting chemotaxis protein - Term 27709 - 27748 6.7 27 15 Op 1 . - CDS 27757 - 29118 1259 ## COG0477 Permeases of the major facilitator superfamily - Prom 29150 - 29209 1.8 - Term 29173 - 29216 1.7 28 15 Op 2 . - CDS 29333 - 30247 491 ## COG1802 Transcriptional regulators - Prom 30272 - 30331 4.0 + Prom 30236 - 30295 3.9 29 16 Tu 1 . + CDS 30386 - 31408 1113 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 31436 - 31474 3.4 30 17 Tu 1 . - CDS 31547 - 33838 2229 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Prom 33890 - 33949 4.2 - Term 34037 - 34081 5.1 31 18 Op 1 . - CDS 34092 - 34583 496 ## S4661 hypothetical protein 32 18 Op 2 . - CDS 34635 - 35372 772 ## COG1484 DNA replication protein 33 18 Op 3 . - CDS 35375 - 35914 545 ## COG5529 Pyocin large subunit - Prom 35955 - 36014 2.1 - Term 35957 - 36004 7.8 34 19 Op 1 12/0.000 - CDS 36021 - 36494 444 ## COG3610 Uncharacterized conserved protein 35 19 Op 2 . - CDS 36485 - 37309 405 ## COG2966 Uncharacterized conserved protein 36 20 Op 1 . + CDS 37925 - 38599 300 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 37 20 Op 2 . + CDS 38611 - 39234 303 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 39244 - 39279 2.4 38 21 Tu 1 . - CDS 39272 - 40060 625 ## COG4114 Uncharacterized Fe-S protein - Prom 40149 - 40208 7.1 + Prom 40011 - 40070 3.5 39 22 Tu 1 . + CDS 40200 - 40436 218 ## SbBS512_E4910 hypothetical protein - TRNA 40475 - 40561 69.1 # Leu CAG 0 0 - TRNA 40596 - 40682 66.6 # Leu CAG 0 0 - TRNA 40711 - 40798 60.1 # Leu CAG 0 0 40 23 Tu 1 . - CDS 41066 - 42097 264 ## PROTEIN SUPPORTED gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative - Prom 42120 - 42179 6.0 + Prom 42118 - 42177 3.0 41 24 Op 1 8/0.041 + CDS 42200 - 42613 376 ## COG3050 DNA polymerase III, psi subunit 42 24 Op 2 4/0.510 + CDS 42582 - 43028 749 ## PROTEIN SUPPORTED gi|15804944|ref|NP_290986.1| ribosomal-protein-alanine N-acetyltransferase 43 24 Op 3 3/0.653 + CDS 43043 - 43720 740 ## COG1011 Predicted hydrolase (HAD superfamily) 44 24 Op 4 5/0.286 + CDS 43811 - 45400 2021 ## COG4108 Peptide chain release factor RF-3 + Term 45411 - 45450 8.0 45 25 Tu 1 . + CDS 45793 - 46398 777 ## COG2823 Predicted periplasmic or secreted lipoprotein 46 26 Tu 1 . + CDS 46525 - 46686 195 ## gi|157368899|ref|YP_001476888.1| hypothetical protein Spro_0654 + Term 46713 - 46755 7.2 + Prom 46721 - 46780 2.3 47 27 Op 1 4/0.510 + CDS 46808 - 47881 879 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily 48 27 Op 2 . + CDS 47878 - 48660 794 ## COG0084 Mg-dependent DNase + Term 48683 - 48734 3.0 49 28 Tu 1 . - CDS 48773 - 49507 597 ## COG1180 Pyruvate-formate lyase-activating enzyme - Term 49547 - 49582 4.0 50 29 Tu 1 . - CDS 49608 - 51158 1443 ## ECIAI1_4603 hypothetical protein - Prom 51262 - 51321 4.7 + Prom 51262 - 51321 4.5 51 30 Tu 1 7/0.061 + CDS 51416 - 52195 1017 ## COG0274 Deoxyribose-phosphate aldolase 52 31 Op 1 4/0.510 + CDS 52322 - 53644 1794 ## COG0213 Thymidine phosphorylase 53 31 Op 2 9/0.020 + CDS 53696 - 54919 1600 ## COG1015 Phosphopentomutase 54 31 Op 3 . + CDS 54999 - 55718 946 ## COG0813 Purine-nucleoside phosphorylase + Term 55749 - 55790 8.6 55 32 Op 1 2/0.755 - CDS 55993 - 56142 158 ## COG1396 Predicted transcriptional regulators 56 32 Op 2 2/0.755 - CDS 56174 - 57190 1157 ## COG0095 Lipoate-protein ligase A 57 32 Op 3 . - CDS 57218 - 57862 762 ## COG3726 Uncharacterized membrane protein affecting hemolysin expression - Prom 57944 - 58003 4.6 + Prom 57871 - 57930 3.1 58 33 Op 1 5/0.286 + CDS 57968 - 58936 1165 ## COG0560 Phosphoserine phosphatase 59 33 Op 2 1/0.878 + CDS 58985 - 60367 1480 ## COG1066 Predicted ATP-dependent serine protease 60 33 Op 3 . + CDS 60388 - 61620 1302 ## COG3172 Predicted ATPase/kinase involved in NAD metabolism - Term 61769 - 61832 2.1 61 34 Tu 1 . - CDS 61927 - 63594 2302 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 63691 - 63750 3.2 62 35 Op 1 4/0.510 + CDS 63805 - 65742 1808 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 63 35 Op 2 . + CDS 65832 - 66158 379 ## COG2973 Trp operon repressor + Term 66180 - 66245 3.1 64 36 Tu 1 . - CDS 66243 - 66764 395 ## COG1986 Uncharacterized conserved protein - Prom 66791 - 66850 4.3 + Prom 66715 - 66774 2.7 65 37 Tu 1 . + CDS 66816 - 67463 677 ## COG0406 Fructose-2,6-bisphosphatase 66 38 Tu 1 . - CDS 67460 - 68329 981 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 68522 - 68581 4.5 + Prom 68436 - 68495 4.3 67 39 Op 1 4/0.510 + CDS 68540 - 69013 518 ## COG3045 Uncharacterized protein conserved in bacteria 68 39 Op 2 40/0.000 + CDS 69026 - 69715 623 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 69 39 Op 3 6/0.122 + CDS 69715 - 71139 1218 ## COG0642 Signal transduction histidine kinase 70 39 Op 4 . + CDS 71197 - 72549 1213 ## COG4452 Inner membrane protein involved in colicin E2 resistance + Term 72566 - 72596 3.0 - Term 72553 - 72583 3.0 71 40 Tu 1 . - CDS 72609 - 73325 893 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 73710 - 73769 8.1 72 41 Tu 1 . + CDS 73961 - 74647 544 ## COG0565 rRNA methylase + Prom 74725 - 74784 4.1 73 42 Op 1 11/0.000 + CDS 75007 - 77469 2285 ## COG0527 Aspartokinases 74 42 Op 2 19/0.000 + CDS 77471 - 78403 769 ## COG0083 Homoserine kinase 75 42 Op 3 . + CDS 78404 - 79690 1497 ## COG0498 Threonine synthase + Term 79714 - 79753 4.2 + Prom 79699 - 79758 2.9 76 43 Tu 1 . + CDS 79904 - 80200 156 ## ECUMN_0005 conserved hypothetical protein; putative exported protein - Term 80190 - 80235 3.3 77 44 Op 1 5/0.286 - CDS 80353 - 81129 871 ## COG3022 Uncharacterized protein conserved in bacteria 78 44 Op 2 . - CDS 81199 - 82629 808 ## PROTEIN SUPPORTED gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 - Prom 82686 - 82745 4.3 + Prom 82802 - 82861 1.9 79 45 Tu 1 . + CDS 82908 - 83861 1221 ## COG0176 Transaldolase + Term 83869 - 83909 9.3 + Prom 83887 - 83946 2.4 80 46 Tu 1 . + CDS 83976 - 84563 688 ## PROTEIN SUPPORTED gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 - Term 84553 - 84590 6.2 81 47 Tu 1 4/0.510 - CDS 84598 - 85164 704 ## COG1584 Predicted membrane protein - Prom 85233 - 85292 4.5 - Term 85193 - 85233 3.2 82 48 Op 1 . - CDS 85313 - 86026 630 ## COG4735 Uncharacterized protein conserved in bacteria 83 48 Op 2 . - CDS 86052 - 86456 398 ## ECO103_0013 hypothetical protein - Prom 86494 - 86553 4.9 84 49 Op 1 31/0.000 + CDS 86833 - 88749 2320 ## COG0443 Molecular chaperone + Term 88778 - 88824 11.0 85 49 Op 2 . + CDS 88838 - 89968 1184 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 90043 - 90077 0.8 - Term 90031 - 90064 3.6 86 50 Tu 1 . - CDS 90072 - 90224 123 ## ECO103_0016 regulatory protein MokC for HokC 87 51 Op 1 5/0.286 + CDS 90810 - 91976 1297 ## COG3004 Na+/H+ antiporter + Term 91992 - 92023 2.4 88 51 Op 2 . + CDS 92042 - 92941 790 ## COG0583 Transcriptional regulator 89 52 Tu 1 . - CDS 93157 - 93405 229 ## ECIAI1_0019 hypothetical protein - Prom 93426 - 93485 9.6 90 53 Tu 1 . - CDS 93951 - 95096 452 ## COG3188 P pilus assembly protein, porin PapC 91 54 Tu 1 . - CDS 95529 - 95846 129 ## SSON_0027 hypothetical protein - Term 97362 - 97414 1.3 92 55 Tu 1 . - CDS 97434 - 97697 422 ## PROTEIN SUPPORTED gi|15799705|ref|NP_285717.1| 30S ribosomal protein S20 - Prom 97738 - 97797 3.6 + Prom 97544 - 97603 5.2 93 56 Op 1 . + CDS 97800 - 98018 56 ## SSON_0029 hypothetical protein 94 56 Op 2 16/0.000 + CDS 98026 - 98967 391 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 95 56 Op 3 16/0.000 + CDS 99010 - 101826 3170 ## COG0060 Isoleucyl-tRNA synthetase 96 56 Op 4 7/0.061 + CDS 101826 - 102320 581 ## COG0597 Lipoprotein signal peptidase 97 56 Op 5 7/0.061 + CDS 102408 - 102857 257 ## PROTEIN SUPPORTED gi|225086978|ref|YP_002658248.1| ribosomal protein S2 98 56 Op 6 3/0.653 + CDS 102859 - 103809 441 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P + Term 103838 - 103871 2.1 99 56 Op 7 3/0.653 + CDS 103875 - 104789 713 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase + Term 104806 - 104845 3.3 + Prom 104810 - 104869 3.9 100 57 Tu 1 . + CDS 104956 - 105777 923 ## COG0289 Dihydrodipicolinate reductase + Term 105827 - 105868 -0.3 + Prom 106144 - 106203 5.5 101 58 Op 1 24/0.000 + CDS 106338 - 107381 1069 ## COG0505 Carbamoylphosphate synthase small subunit 102 58 Op 2 . + CDS 107399 - 110620 4336 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) + Term 110631 - 110665 1.2 103 59 Tu 1 . - CDS 110628 - 110846 95 ## ECO103_0035 hypothetical protein - Prom 111015 - 111074 2.8 + Prom 110633 - 110692 4.8 104 60 Tu 1 . + CDS 110881 - 111276 309 ## ECO103_0036 DNA-binding transcriptional activator CaiF + Term 111384 - 111420 3.0 - Term 111126 - 111158 -1.0 105 61 Op 1 3/0.653 - CDS 111362 - 111952 429 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 106 61 Op 2 5/0.286 - CDS 111958 - 112851 1029 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 107 61 Op 3 4/0.510 - CDS 112852 - 114405 1232 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 108 61 Op 4 8/0.041 - CDS 114479 - 115696 1449 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase - Prom 115716 - 115775 2.2 109 62 Op 1 4/0.510 - CDS 115825 - 116967 1435 ## COG1960 Acyl-CoA dehydrogenases 110 62 Op 2 . - CDS 116998 - 118512 1694 ## COG1292 Choline-glycine betaine transporter - Prom 118536 - 118595 10.8 + Prom 118849 - 118908 3.9 111 63 Op 1 29/0.000 + CDS 118986 - 119756 840 ## COG2086 Electron transfer flavoprotein, beta subunit 112 63 Op 2 9/0.020 + CDS 119771 - 120712 896 ## COG2025 Electron transfer flavoprotein, alpha subunit 113 63 Op 3 12/0.000 + CDS 120763 - 122049 1323 ## COG0644 Dehydrogenases (flavoproteins) 114 63 Op 4 4/0.510 + CDS 122046 - 122333 344 ## COG2440 Ferredoxin-like protein 115 63 Op 5 4/0.510 + CDS 122391 - 123722 1530 ## COG0477 Permeases of the major facilitator superfamily + Prom 123791 - 123850 4.4 116 64 Op 1 7/0.061 + CDS 123887 - 124360 533 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 117 64 Op 2 . + CDS 124353 - 124700 636 ## COG0475 Kef-type K+ transport systems, membrane components 118 64 Op 3 4/0.510 + CDS 124710 - 126215 2031 ## COG0475 Kef-type K+ transport systems, membrane components + Prom 126324 - 126383 7.0 119 65 Tu 1 . + CDS 126407 - 126886 675 ## COG0262 Dihydrofolate reductase + Term 126911 - 126956 8.4 120 66 Op 1 8/0.041 - CDS 126964 - 127806 787 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 121 66 Op 2 8/0.041 - CDS 127813 - 128190 306 ## COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport 122 66 Op 3 12/0.000 - CDS 128193 - 129014 738 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 123 66 Op 4 13/0.000 - CDS 129011 - 130000 461 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 124 66 Op 5 16/0.000 - CDS 130000 - 131286 1445 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 125 66 Op 6 . - CDS 131339 - 133693 2205 ## COG1452 Organic solvent tolerance protein OstA - Prom 133838 - 133897 2.4 + Prom 133674 - 133733 3.3 126 67 Tu 1 . + CDS 133948 - 134763 814 ## COG1076 DnaJ-domain-containing proteins 1 + Term 134865 - 134909 6.1 127 68 Op 1 7/0.061 - CDS 134880 - 135539 218 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 128 68 Op 2 5/0.286 - CDS 135551 - 138457 3683 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 129 69 Op 1 3/0.653 - CDS 138622 - 140973 1851 ## COG0417 DNA polymerase elongation subunit (family B) - Term 140978 - 141018 5.8 130 69 Op 2 5/0.286 - CDS 141048 - 141743 672 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 141844 - 141903 2.6 - Term 141800 - 141836 -0.5 131 70 Op 1 7/0.061 - CDS 141912 - 143414 1617 ## COG2160 L-arabinose isomerase 132 70 Op 2 . - CDS 143425 - 145125 1657 ## COG1069 Ribulose kinase - Prom 145273 - 145332 4.2 + Prom 145232 - 145291 4.8 133 71 Op 1 4/0.510 + CDS 145413 - 146342 695 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 146346 - 146405 3.3 134 71 Op 2 . + CDS 146428 - 147192 902 ## COG0586 Uncharacterized membrane-associated protein - Term 147230 - 147268 1.3 135 72 Op 1 11/0.000 - CDS 147294 - 147992 282 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 136 72 Op 2 14/0.000 - CDS 147976 - 149586 1606 ## COG1178 ABC-type Fe3+ transport system, permease component 137 72 Op 3 2/0.755 - CDS 149562 - 150545 1029 ## COG4143 ABC-type thiamine transport system, periplasmic component - Term 150552 - 150603 9.0 138 73 Tu 1 . - CDS 150709 - 152364 1509 ## COG4533 ABC-type uncharacterized transport system, periplasmic component + Prom 152372 - 152431 3.1 139 74 Op 1 . + CDS 152453 - 152584 157 ## ECIAI1_0070 hypothetical protein 140 74 Op 2 . + CDS 152562 - 152813 56 ## 141 74 Op 3 . + CDS 152704 - 153864 869 ## COG0477 Permeases of the major facilitator superfamily - Term 153874 - 153905 4.8 142 75 Op 1 30/0.000 - CDS 153913 - 154518 874 ## COG0066 3-isopropylmalate dehydratase small subunit 143 75 Op 2 10/0.000 - CDS 154529 - 155929 1706 ## COG0065 3-isopropylmalate dehydratase large subunit 144 75 Op 3 11/0.000 - CDS 155932 - 157023 1260 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 145 75 Op 4 . - CDS 157023 - 158594 1846 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 146 76 Tu 1 . + CDS 159415 - 160377 843 ## COG0583 Transcriptional regulator + Term 160380 - 160438 17.7 + Prom 160420 - 160479 9.5 147 77 Op 1 32/0.000 + CDS 160695 - 162419 1488 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 148 77 Op 2 3/0.653 + CDS 162422 - 162913 497 ## COG0440 Acetolactate synthase, small (regulatory) subunit + Term 162939 - 162971 1.5 + Prom 163005 - 163064 5.7 149 78 Tu 1 . + CDS 163093 - 164097 1116 ## COG1609 Transcriptional regulators + Prom 164595 - 164654 4.1 150 79 Op 1 29/0.000 + CDS 164699 - 165157 278 ## COG2001 Uncharacterized protein conserved in bacteria 151 79 Op 2 12/0.000 + CDS 165162 - 166100 1164 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 152 79 Op 3 12/0.000 + CDS 166097 - 166462 339 ## COG3116 Cell division protein 153 79 Op 4 26/0.000 + CDS 166478 - 168244 1656 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 154 79 Op 5 26/0.000 + CDS 168231 - 169718 1538 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 155 79 Op 6 28/0.000 + CDS 169715 - 171073 1367 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 156 79 Op 7 28/0.000 + CDS 171067 - 172149 1357 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 157 79 Op 8 25/0.000 + CDS 172152 - 173468 1413 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 158 79 Op 9 31/0.000 + CDS 173468 - 174712 1549 ## COG0772 Bacterial cell division membrane protein 159 79 Op 10 26/0.000 + CDS 174733 - 175776 972 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 160 79 Op 11 11/0.000 + CDS 175830 - 177305 1635 ## COG0773 UDP-N-acetylmuramate-alanine ligase 161 79 Op 12 18/0.000 + CDS 177298 - 178218 1070 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 162 79 Op 13 25/0.000 + CDS 178220 - 179050 707 ## COG1589 Cell division septal protein 163 79 Op 14 35/0.000 + CDS 179047 - 180309 1115 ## COG0849 Actin-like ATPase involved in cell division 164 79 Op 15 11/0.000 + CDS 180370 - 181521 1348 ## COG0206 Cell division GTPase + Prom 181532 - 181591 1.8 165 79 Op 16 . + CDS 181622 - 182539 815 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase + Term 182566 - 182623 2.1 + Prom 182587 - 182646 4.9 166 80 Op 1 . + CDS 182695 - 183282 335 ## G2583_0101 secretion monitor protein + Term 183313 - 183341 0.5 167 80 Op 2 8/0.041 + CDS 183344 - 186049 3735 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) + Term 186071 - 186101 3.0 168 81 Tu 1 . + CDS 186109 - 186498 337 ## PROTEIN SUPPORTED gi|42631237|ref|ZP_00156775.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 186530 - 186574 3.7 169 82 Op 1 7/0.061 - CDS 186598 - 186795 111 ## COG3024 Uncharacterized protein conserved in bacteria 170 82 Op 2 7/0.061 - CDS 186805 - 187548 784 ## COG4582 Uncharacterized protein conserved in bacteria 171 82 Op 3 . - CDS 187548 - 188168 599 ## COG0237 Dephospho-CoA kinase - Prom 188270 - 188329 4.8 + Prom 188126 - 188185 3.0 172 83 Tu 1 . + CDS 188393 - 189436 1014 ## COG0516 IMP dehydrogenase/GMP reductase + Term 189445 - 189482 7.7 173 84 Op 1 24/0.000 - CDS 189471 - 190673 892 ## COG1459 Type II secretory pathway, component PulF 174 84 Op 2 8/0.041 - CDS 190663 - 192048 802 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 175 84 Op 3 5/0.286 - CDS 192058 - 192498 497 ## COG4969 Tfp pilus assembly protein, major pilin PilA - Prom 192575 - 192634 3.5 176 85 Tu 1 . - CDS 192701 - 193594 460 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 - Prom 193615 - 193674 2.0 + Prom 193412 - 193471 2.0 177 86 Op 1 6/0.122 + CDS 193682 - 194233 522 ## COG3023 Negative regulator of beta-lactamase expression 178 86 Op 2 . + CDS 194230 - 195084 868 ## COG3725 Membrane protein required for beta-lactamase induction - Term 195077 - 195122 2.5 179 87 Tu 1 . - CDS 195127 - 196497 1465 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 196589 - 196648 5.2 + Prom 196768 - 196827 7.4 180 88 Tu 1 . + CDS 197041 - 197805 740 ## COG2186 Transcriptional regulators + Term 197810 - 197849 2.8 + Prom 197830 - 197889 1.7 181 89 Op 1 13/0.000 + CDS 197966 - 200629 3489 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component 182 89 Op 2 30/0.000 + CDS 200644 - 202536 2287 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes + Term 202543 - 202576 5.2 + Prom 202607 - 202666 7.8 183 89 Op 3 . + CDS 202861 - 204285 682 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 204309 - 204364 5.0 - Term 204308 - 204337 -0.9 184 90 Tu 1 . - CDS 204356 - 206113 653 ## EC55989_0110 hypothetical protein - Prom 206327 - 206386 4.4 + Prom 206302 - 206361 8.6 185 91 Tu 1 . + CDS 206468 - 209065 3177 ## COG1049 Aconitase B + Term 209101 - 209138 6.1 + Prom 209083 - 209142 6.4 186 92 Tu 1 . + CDS 209241 - 209603 477 ## COG3112 Uncharacterized protein conserved in bacteria + Term 209759 - 209797 2.2 - Term 209595 - 209636 10.2 187 93 Op 1 9/0.020 - CDS 209641 - 210435 825 ## COG1586 S-adenosylmethionine decarboxylase 188 93 Op 2 . - CDS 210451 - 211317 838 ## COG0421 Spermidine synthase - Prom 211356 - 211415 4.8 - Term 211364 - 211397 3.8 189 94 Tu 1 . - CDS 211423 - 211770 358 ## ECSE_0122 hypothetical protein - Prom 211793 - 211852 1.6 + Prom 211838 - 211897 4.8 190 95 Tu 1 . + CDS 211936 - 213486 1585 ## COG2132 Putative multicopper oxidases + Term 213507 - 213538 4.1 - Term 213495 - 213526 4.1 191 96 Tu 1 . - CDS 213533 - 215923 2598 ## COG4993 Glucose dehydrogenase - Prom 215960 - 216019 3.7 + Prom 215931 - 215990 6.4 192 97 Tu 1 . + CDS 216129 - 216665 855 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase + Term 216674 - 216712 4.2 193 98 Tu 1 . - CDS 216706 - 217368 650 ## COG0288 Carbonic anhydrase - Prom 217464 - 217523 5.4 + Prom 217379 - 217438 4.2 194 99 Op 1 45/0.000 + CDS 217477 - 218403 946 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 195 99 Op 2 3/0.653 + CDS 218400 - 219170 866 ## COG0842 ABC-type multidrug transport system, permease component + Term 219178 - 219217 6.6 196 100 Op 1 4/0.510 + CDS 219275 - 219715 333 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA + Term 219729 - 219768 2.8 197 100 Op 2 . + CDS 219779 - 221008 903 ## COG0726 Predicted xylanase/chitin deacetylase + Term 221022 - 221059 2.1 198 101 Tu 1 . - CDS 221012 - 221392 471 ## COG0853 Aspartate 1-decarboxylase - Prom 221452 - 221511 2.6 199 102 Tu 1 . + CDS 221342 - 221554 83 ## EcE24377A_0134 hypothetical protein + Prom 221579 - 221638 1.8 200 103 Tu 1 . + CDS 221666 - 222568 711 ## COG5464 Uncharacterized conserved protein + Term 222570 - 222614 2.1 - Term 222595 - 222637 10.2 201 104 Op 1 19/0.000 - CDS 222642 - 223493 1001 ## COG0414 Panthothenate synthetase 202 104 Op 2 3/0.653 - CDS 223505 - 224299 894 ## COG0413 Ketopantoate hydroxymethyltransferase - Prom 224327 - 224386 4.4 - Term 224362 - 224407 7.1 203 105 Tu 1 . - CDS 224412 - 225362 169 ## COG3539 P pilus assembly protein, pilin FimA - Prom 225436 - 225495 4.7 204 106 Op 1 . - CDS 225739 - 226335 226 ## SSON_0145 putative fimbrial protein 205 106 Op 2 . - CDS 226362 - 226964 374 ## B21_00135 hypothetical protein 206 106 Op 3 6/0.122 - CDS 226979 - 227362 192 ## COG3539 P pilus assembly protein, pilin FimA - Prom 227490 - 227549 3.6 - Term 227476 - 227514 -0.9 207 107 Op 1 10/0.000 - CDS 227565 - 230165 1490 ## COG3188 P pilus assembly protein, porin PapC 208 107 Op 2 7/0.061 - CDS 230200 - 230892 475 ## COG3121 P pilus assembly protein, chaperone PapD - Prom 230929 - 230988 7.8 - Term 230957 - 231011 6.4 209 108 Tu 1 3/0.653 - CDS 231045 - 231629 493 ## COG3539 P pilus assembly protein, pilin FimA 210 109 Op 1 7/0.061 - CDS 231999 - 232478 203 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 211 109 Op 2 1/0.878 - CDS 232475 - 233839 1405 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Prom 233864 - 233923 3.5 212 110 Op 1 3/0.653 - CDS 233932 - 234828 500 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Term 234834 - 234866 3.0 213 110 Op 2 6/0.122 - CDS 234895 - 235350 659 ## COG1734 DnaK suppressor protein - Prom 235404 - 235463 2.3 - Term 235428 - 235463 -0.1 214 111 Op 1 3/0.653 - CDS 235528 - 236232 379 ## COG1489 DNA-binding protein, stimulates sugar fermentation 215 111 Op 2 . - CDS 236247 - 236777 498 ## COG1514 2'-5' RNA ligase - Prom 236799 - 236858 4.3 216 112 Tu 1 . + CDS 236806 - 239280 2088 ## COG1643 HrpA-like helicases + Prom 239375 - 239434 1.7 217 113 Tu 1 . + CDS 239476 - 242010 2944 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Prom 242150 - 242209 6.2 218 114 Op 1 7/0.061 + CDS 242230 - 244473 2541 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 219 114 Op 2 14/0.000 + CDS 244524 - 245321 229 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 220 114 Op 3 33/0.000 + CDS 245321 - 246211 858 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 221 114 Op 4 . + CDS 246208 - 248190 1892 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component - Term 248184 - 248218 8.3 222 115 Tu 1 . - CDS 248225 - 249505 1497 ## COG0001 Glutamate-1-semialdehyde aminotransferase - Prom 249614 - 249673 5.4 + Prom 249496 - 249555 3.8 223 116 Op 1 3/0.653 + CDS 249730 - 251151 1541 ## COG0038 Chloride channel protein EriC 224 116 Op 2 . + CDS 251233 - 251577 496 ## COG0316 Uncharacterized conserved protein + Term 251589 - 251625 8.2 225 117 Tu 1 . - CDS 251624 - 252169 607 ## COG2860 Predicted membrane protein - Prom 252215 - 252274 2.5 226 118 Op 1 5/0.286 - CDS 252285 - 253085 775 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 227 118 Op 2 . - CDS 253078 - 253776 714 ## COG0775 Nucleoside phosphorylase - Prom 253877 - 253936 4.3 + Prom 253729 - 253788 2.0 228 119 Tu 1 . + CDS 253860 - 255377 1091 ## COG0232 dGTP triphosphohydrolase + Prom 255399 - 255458 2.7 229 120 Tu 1 . + CDS 255507 - 256931 1530 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 256942 - 256977 6.5 + Prom 256963 - 257022 3.8 230 121 Tu 1 . + CDS 257086 - 258243 1187 ## COG3835 Sugar diacid utilization regulator + Term 258355 - 258389 -0.5 231 122 Tu 1 . - CDS 258332 - 258718 451 ## ECIAI1_0162 hypothetical protein - Prom 258747 - 258806 3.6 - Term 258985 - 259025 10.6 232 123 Op 1 5/0.286 - CDS 259033 - 259857 1096 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase 233 123 Op 2 9/0.020 - CDS 259888 - 262560 2414 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase - Term 262585 - 262618 4.5 234 123 Op 3 . - CDS 262622 - 263416 890 ## COG0024 Methionine aminopeptidase - Prom 263532 - 263591 4.6 + Prom 263491 - 263550 3.5 235 124 Op 1 38/0.000 + CDS 263586 - 264509 1594 ## PROTEIN SUPPORTED gi|26106512|gb|AAN78698.1|AE016755_198 30S ribosomal protein S2 + Term 264684 - 264717 3.1 + Prom 264682 - 264741 3.8 236 124 Op 2 24/0.000 + CDS 264767 - 265618 1001 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts + Term 265629 - 265662 5.2 + Prom 265663 - 265722 4.9 237 125 Op 1 33/0.000 + CDS 265765 - 266490 1050 ## COG0528 Uridylate kinase + Prom 266646 - 266705 5.4 238 125 Op 2 8/0.041 + CDS 266782 - 267339 837 ## COG0233 Ribosome recycling factor + Prom 267349 - 267408 2.1 239 125 Op 3 7/0.061 + CDS 267431 - 268627 924 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase + Term 268732 - 268761 0.4 + Prom 268634 - 268693 3.9 240 126 Op 1 32/0.000 + CDS 268816 - 269574 398 ## COG0020 Undecaprenyl pyrophosphate synthase 241 126 Op 2 12/0.000 + CDS 269695 - 270444 613 ## COG0575 CDP-diglyceride synthetase 242 126 Op 3 18/0.000 + CDS 270456 - 271808 954 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 243 126 Op 4 17/0.000 + CDS 271838 - 274270 2452 ## COG4775 Outer membrane protein/protective antigen OMA87 + Prom 274280 - 274339 2.1 244 126 Op 5 15/0.000 + CDS 274392 - 274877 612 ## COG2825 Outer membrane protein 245 126 Op 6 18/0.000 + CDS 274881 - 275906 917 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase + Term 275933 - 275984 7.1 + Prom 275925 - 275984 4.0 246 127 Op 1 25/0.000 + CDS 276011 - 276466 492 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 247 127 Op 2 11/0.000 + CDS 276470 - 277258 806 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 248 127 Op 3 11/0.000 + CDS 277258 - 278406 1107 ## COG0763 Lipid A disaccharide synthetase 249 127 Op 4 6/0.122 + CDS 278403 - 278999 737 ## COG0164 Ribonuclease HII 250 127 Op 5 7/0.061 + CDS 279036 - 282518 3586 ## COG0587 DNA polymerase III, alpha subunit 251 127 Op 6 3/0.653 + CDS 282531 - 283490 1397 ## COG0825 Acetyl-CoA carboxylase alpha subunit + Term 283511 - 283540 1.2 + Prom 283509 - 283568 3.5 252 128 Op 1 1/0.878 + CDS 283589 - 285730 2011 ## COG1982 Arginine/lysine/ornithine decarboxylases 253 128 Op 2 2/0.755 + CDS 285787 - 286176 414 ## COG0346 Lactoylglutathione lyase and related lyases + Term 286196 - 286228 4.7 254 129 Tu 1 . + CDS 286241 - 287539 1117 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control + Term 287751 - 287809 1.3 - Term 287534 - 287578 6.6 255 130 Op 1 . - CDS 287588 - 287842 315 ## COG4568 Transcriptional antiterminator 256 130 Op 2 . - CDS 287835 - 288035 174 ## ECIAI39_0458 hypothetical protein - Prom 288107 - 288166 3.3 + Prom 288120 - 288179 1.8 257 131 Op 1 5/0.286 + CDS 288201 - 288746 781 ## COG4681 Uncharacterized protein conserved in bacteria 258 131 Op 2 4/0.510 + CDS 288743 - 289165 285 ## COG1186 Protein chain release factor B 259 131 Op 3 . + CDS 289179 - 289889 681 ## COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance + Term 289921 - 289959 3.0 Predicted protein(s) >gi|299856448|gb|ADWV01000003.1| GENE 1 3 - 206 127 67 aa, chain + ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 67 101 167 167 129 100.0 2e-30 DGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY LNIKHYQ >gi|299856448|gb|ADWV01000003.1| GENE 2 378 - 707 170 109 aa, chain + ## HITS:1 COG:Z5943m_1 KEGG:ns NR:ns ## COG: Z5943m_1 COG1479 # Protein_GI_number: 15804980 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 1 96 65 160 592 189 96.0 7e-49 MYQVSGISPLLVIDGQQRLTTAMLLIEALSRHLGEDEVFDGFSAMKLRNYYLLNPYESGE KGFKLLLTETDKDSLLALIKQRPMPENYSHRIMETLLSLMNKLPNSVMT >gi|299856448|gb|ADWV01000003.1| GENE 3 797 - 2278 1286 493 aa, chain + ## HITS:1 COG:Z5943m_1 KEGG:ns NR:ns ## COG: Z5943m_1 COG1479 # Protein_GI_number: 15804980 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 1 388 205 592 592 775 98.0 0 MNSTGKALSQADLVRNFILMGLEPEHQTRLYEDHWRPMEVAFGQQGYSEYFDSFMRHYLT VKTGEIPRTDEVYEAFKLHARSQSVAEKGVDRLVEDIHIYAEYYCAMALGKESDKSLATA FQDLRELKVDVAYPFLLALYHDYKNGVLSHEDFLSIIRLIESYVFRRAVCAIPTNSLNKT FATFYKVINKEKYLESIQVHFLNLPSYRRFPNDDEFKRELKVRDLYNFRSRSYWLRRLEN DKRRERVEEFTIEHIMPQNENLSAKWREELGSDWQRIHKELLHTLGNLTLTRYNSRYSDR PFAEKRDIEDGFKHSPLYLNIGLGQCEKWDEAAIHARADRLAELAVQVWQAPSLPEEVLA VYRGQPENKTSYSLSDYPFLADGLHSRLLFDHLRDEIMRLDAGITQEVLKLYIAFKAETN FVDVVPQKSRLRLSLNMQFHELVDPKGIAKDVTNVGRWGNGDVEIGFSDLAQLPYIMGLI RQAFEKQMESALV >gi|299856448|gb|ADWV01000003.1| GENE 4 2325 - 2666 499 113 aa, chain - ## HITS:1 COG:no KEGG:APECO1_2079 NR:ns ## KEGG: APECO1_2079 # Name: yjiW # Def: endoribonuclease SymE # Organism: E.coli_APEC # Pathway: not_defined # 1 113 20 132 132 206 95.0 3e-52 MTDTHSIAQPFEAEVSPANNRQLTVSYASRYPDCSRIPAITLKGQWLEAAGFATGTVVDV KVMEGCIVLTAQPPVAEESELMQSLRQVCKLSARKQKQVQEFIGVIAGKQKVA >gi|299856448|gb|ADWV01000003.1| GENE 5 2887 - 4638 802 583 aa, chain - ## HITS:1 COG:ECs5306 KEGG:ns NR:ns ## COG: ECs5306 COG0732 # Protein_GI_number: 15834560 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Escherichia coli O157:H7 # 1 583 1 584 584 534 53.0 1e-151 MSVEKLIVDHMETWTSALQTRSTAGRGSSGKIDLYGIKKLRELILELAVRGKLVPQDPND EPASELLKRIAAEKAELVKQGKIKKQKPLPEISEEEKPFELPEGWEWVTLATVGEIVGGG TPKSDNPQFWAKNGIKWITPADLYGLKGKYITSGARDISPAGLSNSSARLMPKGSVLFSS RAPIGYVAIADAELSTNQGFKSCVPYIKESAEYIYYFLLASAKKIDAEASGTTFKEVSGA IVSKILLPLPPLSEQLKIVSRANELMSLCDQLEQQSLTSLDAHQQLVETLLGTLTDSQNA EELAENWTRISEHFDTLFTTEASVDALKQTILQLAVMGKLVPQDPNDEPASELLKRIAQE KAQLVKEGKIKKQKSLPPISDEEKPFELPEGWEWSYLSDIGILARGRSKHRPRNDPTLYA DGTIPLVQTGDVARSNGCINTYSALYNQLGLSQSKLWNKGTLCITIAANIADSGILNFDA CFPDSVVGFTPYENEIPVLYFHYFMMTIKSTLEKFAPSTAQKNINIDILSQLFFPCPPLE EFHRIVDKVQNLLSVCDVLRAYIQSAQQTQLHLADALTDAAIN >gi|299856448|gb|ADWV01000003.1| GENE 6 4638 - 6107 1759 489 aa, chain - ## HITS:1 COG:ECs5307 KEGG:ns NR:ns ## COG: ECs5307 COG0286 # Protein_GI_number: 15834561 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Escherichia coli O157:H7 # 1 489 5 493 493 995 99.0 0 MSISSVIKSLQDIMRKDAGVDGDAQRLGQLSWLLFLKIFDAQEEALELEQDNYQYPIPQR YLWRSWAANAQGITGDSLLEFVNDDLFPALKNLTAPIDKNPRGYVVKQAFSDAYNYMKNG TLLRQVINKLNEIDFTSASERHLFGDIYEQILKDLQSAGNAGEFYTPRAVTRFMVDRVDP KLGESIMDPACGTGGFLACAFDHVKNKYVKSVADHQTLQQQIHGVEKKQLPHLLATTNML LHGIEVPVQIRHDNTLNKPLSSWDEQLDVIVTNPPFGGTEEDGIEKNFPAEMQTRETADL FLQLIVEVLAKNGRAAVVLPDGTLFGEGVKTKIKKLLTEECNLHTIVRLPNGVFNPYTGI KTNLLFFTKGQPTKEIWFYEHPYPAGVKNYSKTKPMKFEEFQAEIDWWGNEADGFASRVE NEQAWKVSIDDVIARNFNLDIKNPHQAETVSHDPDELLAQYAKQQAEIQTLRNQLRDILG AALSGKEVN >gi|299856448|gb|ADWV01000003.1| GENE 7 6174 - 7070 1054 298 aa, chain - ## HITS:1 COG:ECs5308 KEGG:ns NR:ns ## COG: ECs5308 COG4096 # Protein_GI_number: 15834562 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Escherichia coli O157:H7 # 1 298 513 810 810 580 99.0 1e-165 MTKFKQIIGRGTRIDERYGKLWFTILDFKKATELFADERFDGIPEKVMDTTPEDIADPDS DFEEKLEEISEHDDEQVTGVDEPPAPPYQVTDTDDVGPLPEEDEKKIRKFHVNGVAVGVI AQRVQYYDADGKLVTESFKDYTRKTLLKEYASLDDFTRKWQDADRKEAIIHELEQQGIIW EVLAEEVGKDLDPFDMLCHVVYGQPPLTRKERAENVRKRNYFTKYSEAAQAVLDNLLDKY ADAGVQEIESIQVLKLKPFDSMGTLPEIIKTGFGDRNGYNQALSELENEIYQLPPRSA >gi|299856448|gb|ADWV01000003.1| GENE 8 7175 - 7879 394 234 aa, chain - ## HITS:1 COG:Cgl0933 KEGG:ns NR:ns ## COG: Cgl0933 COG3316 # Protein_GI_number: 19552183 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 233 1 234 236 274 58.0 9e-74 MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEK RLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLG KILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLK RIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM >gi|299856448|gb|ADWV01000003.1| GENE 9 7926 - 9434 1395 502 aa, chain - ## HITS:1 COG:ECs5308 KEGG:ns NR:ns ## COG: ECs5308 COG4096 # Protein_GI_number: 15834562 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Escherichia coli O157:H7 # 1 502 1 502 810 1012 99.0 0 MAELNLSNLTEADIITKCVMPAILNAGWDNTTQIRQEVKLRDGKVIVRGKVAARRTVKSA DIVLYHKPGIPLAVIEAKANKHEIGKGMQQGIEYARLLDVPFVFATNGDGFIFRDATAAE GECLEKQITLDDFPSPAELWQKFCLWKGYTQAQLPVITQDYYDDGSGKSPRYYQLQAINK TIEAVSNGQNRVLLVMATGTGKTYTAFQIIWRLWKSKNKKRILFLADRNILVDQTKNNDF QPFGTAMTKVSGRTIDPAYEIHLALYQAITGPEEDQKAFKQVAPDFFDLIVIDECHRGSA SEDSAWREILDYFSSATQIGLTATPKETHEVSSTDYFGDPVYVYSLKEGIEDGFLAPYKV VRVDIDVDLQGWRPTKGQTDLNGEVIDDRIYNQKDFDRTMVIDERTELVARTITDYLKRT NPMDKTIVFCNDIDHAERMRRALVNLNPEQVKKNDKYVMKITGDDEIGKAQLDNFINPKK PYPVIATTSELMTTGVDGHCCK >gi|299856448|gb|ADWV01000003.1| GENE 10 9575 - 10543 185 322 aa, chain + ## HITS:1 COG:no KEGG:ECO26_5543 NR:ns ## KEGG: ECO26_5543 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 322 1 322 322 488 89.0 1e-136 MENVRFLQGVKQYFCTKALDVILLIYLLLGFILLPYKYLWKDIVLSLCFVGILLYALVEE NRITEYMGYFVKFSNKNSLNSCAAWCSLIAWFIFLFFVLSINIFPVSVSVSVFSAFSVFV FLGGVFIILELEFKNNKKLMIIRSMTLAVIPIIYLFSSSFSSSLFLSLSNLNITLSPWVE YFWKGMAFLLIFFMLMQLIIYFAFLTLGTKLSVYRLFILAGAFIASTILVVFASKNVENI SYYVLKSTIDFEWRSQVKCGELNISRPDERYFGFNTDKYTVFYSNREGKWGFNELKCKKG SDRRDAYSIENVSEYNVPGWLK >gi|299856448|gb|ADWV01000003.1| GENE 11 10583 - 10774 139 63 aa, chain + ## HITS:1 COG:STM4529 KEGG:ns NR:ns ## COG: STM4529 COG3514 # Protein_GI_number: 16767773 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 55 1 55 100 66 63.0 1e-11 MSMVKHKRGTLYTLDVQQEAELMALVNKSDEDIDYSDIPASGSEAWSDAKRGNFLPDPGI HAQ >gi|299856448|gb|ADWV01000003.1| GENE 12 10861 - 11817 1081 318 aa, chain - ## HITS:1 COG:STM4530 KEGG:ns NR:ns ## COG: STM4530 COG0523 # Protein_GI_number: 16767774 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Salmonella typhimurium LT2 # 1 318 1 318 318 589 91.0 1e-168 MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTL TNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEILCQR YLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKTDVAGEAEKLRERLARINARA PVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIADKQNDISSIVVELDYPVDISEV SRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGVQRLYSADWDRPWGDETPHSTMVFI GIQLPEDEIRAAFAGLRK >gi|299856448|gb|ADWV01000003.1| GENE 13 11828 - 12031 241 67 aa, chain - ## HITS:1 COG:ECs5312 KEGG:ns NR:ns ## COG: ECs5312 COG2879 # Protein_GI_number: 15834566 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Escherichia coli O157:H7 # 1 67 1 67 67 127 100.0 4e-30 MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDG KGGMRCC >gi|299856448|gb|ADWV01000003.1| GENE 14 12162 - 14327 2721 721 aa, chain - ## HITS:1 COG:ECs5313 KEGG:ns NR:ns ## COG: ECs5313 COG1966 # Protein_GI_number: 15834567 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 721 1 721 721 1350 99.0 0 MPGFTMDTKKLFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASVSVYLVAYRYYS LYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGY LPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPVPGTIALFGCFLIMII ILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFIRPGRVGEVSVIGIVLLVASI YFGGVIAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVG LALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFITIACGAVSGFHALISSGTTPKL LANETDARFIGYGAMLMESFVAIMALVAASIIEPGLYFAMNTPPAGLGITMPNLHEMGGE NAPIIMAQLKDVTAHAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAH VFHKVLPMADMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFIPFLKKTDSLVA GIIGTAGCVGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVVLIKMKRTQ YIWVTVVPAVWLLICTTWALGLKLFSTNPQMEGFFYMASQYKEKIANGTDLTAQQIANMN HIVVNNYTNAGLSILFLIVVYSIIFYGFKTWLKVRNSDKRTDKETPYVPIPEGGVKISSH H >gi|299856448|gb|ADWV01000003.1| GENE 15 14705 - 15217 616 170 aa, chain - ## HITS:1 COG:STM1098 KEGG:ns NR:ns ## COG: STM1098 COG1853 # Protein_GI_number: 16764456 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Salmonella typhimurium LT2 # 1 170 1 170 170 300 84.0 1e-81 MQLDEQRLRFRDAMASLSAAVNIITTEGDAGQCGITATAVCSVTDTPPSLMVCINANSAM NPVFQGNGKLCVNVLNHEQELMARHFAGMTGMAMEERFSLSCWQKGPLAQPVLKGSLASL EGEIRDVQAIGTHLVYLVEIKNIILSAEGHGLIYFKRRFHPVMLEMEAAI >gi|299856448|gb|ADWV01000003.1| GENE 16 15235 - 16797 1744 520 aa, chain - ## HITS:1 COG:STM1099 KEGG:ns NR:ns ## COG: STM1099 COG2368 # Protein_GI_number: 16764457 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Aromatic ring hydroxylase # Organism: Salmonella typhimurium LT2 # 1 520 1 520 520 1061 95.0 0 MKPEDFRASTQRPFTGEEYLKSLQDGREIYIYGERVKDVTTHPAFRNAAASVAQLYDALH KPEMQDSLCWNTDTGSGGYTHKFFRVAKSADDLRQQRDAIAEWSRLSYGWMGRTPDYKAA FGCALGANPGFYGQFEQNARNWYTRIQETGLYFNHAIVNPPIDRHLPTDKVKDVYIKLEK ETDAGIIVSGAKVVATNSALTHYNMIGFGSAQVMGENPDFALMFVAPMDADGVKLISRAS YEMVAGATGSPYDYPLSSRFDENDAILVMDNVLIPWENVLIYRDFDRCRRWTMEGGFARM YPLQACVRLAVKLDFITALLKKSLECTGTLEFRGVQADLGEVVAWRNTFWALSDSMCSEA TPWVNGAYLPDHAALQTYRVLAPMAYAKIKNIIERNVTSGLIYLPSSARDLNNPQIDQYL AKYVRGSNGMDHVQRIKILKLMWDAIGSEFGGRHELYEINYSGSQDEIRLQCLRQAQSSG NMDKMMAMVDRCLSEYDQNGWTVPHLHNNDDINMLDKLLK >gi|299856448|gb|ADWV01000003.1| GENE 17 17048 - 17938 735 296 aa, chain - ## HITS:1 COG:STM1108 KEGG:ns NR:ns ## COG: STM1108 COG2207 # Protein_GI_number: 16764466 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 294 1 294 298 538 87.0 1e-153 MCDRQIANIDISKEYDESLGTDDVHYQSFARMAAFFGRHMLPHRHEQYFQMHFLNSGQIE LQLDDHRYSVEAPLFVLTPPSVPHAFITESDADGHVLTVREDLIWPLLEVLYPGTRETFG LPGICLSLADKPDELAALEHYWQLIERESVEQLPGREHTLTLLAQAVFTLLLRNAKLDDH AASGMRGELKLFQRFNMLIESHFHQHWTVPDYANELHITESRLTDICRRFANRPPKRLIF DRQLREAKRLLLFSDNAVNNIAWQLGFKDPAYFARFFNRLVGCSPSAYRAKKVPVT >gi|299856448|gb|ADWV01000003.1| GENE 18 17948 - 19324 1371 458 aa, chain - ## HITS:1 COG:STM1107 KEGG:ns NR:ns ## COG: STM1107 COG0477 # Protein_GI_number: 16764465 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 458 1 458 458 771 87.0 0 MSDTSPAIPESIDPANQHKALTAGQQAVIKKLFRRLIVFLFVLFIFSFLDRINIGFAGLT MGRDLGLSATMFGLATTLFYAAYVIFGIPSNIMLSIVGARRWIATIMVLWGIASTATMFA TGPTSLYVLRILVGITEAGFLPGILLYLTFWFPAYFRARANALFMVAMPVTTALGSIVSG YILSLDGVMALKGWQWLFLLEGFPSVLLGVMVWFWLDDSPDKAKWLTKEDKKCLQEMMDN DRLTLVQPEGAISHHAMQQRSMWREIFTPVVMMYTLAYFCLTNTLSAISIWTPQILQSFN QGSSNITIGLLAAVPQICTILGMVYWSRHSDRRQERRHHTALPYLFAAAGWLLASATDHN MIQMLGIIMASTGSFSAMAIFWTTPDQSISLRARAIGIAVINATGNIGSALSPFMIGWLK DLTGSFNSGLWFVAALLVIGAGIIWAIPMQSSRPRATP >gi|299856448|gb|ADWV01000003.1| GENE 19 19499 - 20287 1151 262 aa, chain - ## HITS:1 COG:STM1106 KEGG:ns NR:ns ## COG: STM1106 COG3836 # Protein_GI_number: 16764464 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Salmonella typhimurium LT2 # 1 253 1 253 263 431 89.0 1e-121 MENSFKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAI APYPSQPVVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGS ALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQILDVEGVDGVFIGPADLSADM GYAGNPQHPEVQAAIEQAIVQIREAGKAPGILIANEQLAKRYLELGALFVAVGVDTTLLA RAAEALAARFGAQATTVKPGVY >gi|299856448|gb|ADWV01000003.1| GENE 20 20298 - 21101 1032 267 aa, chain - ## HITS:1 COG:STM1105 KEGG:ns NR:ns ## COG: STM1105 COG3971 # Protein_GI_number: 16764463 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase # Organism: Salmonella typhimurium LT2 # 1 267 1 267 267 533 95.0 1e-151 MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQREWVRLKIAEGRTLKGH KIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIVPRIEVELAFVLAKPLRGP NCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKP DELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWLANKLAPYDVQLEAGQIILGGSF TRPVPARKGDTFHVDYGNMGSISCRFV >gi|299856448|gb|ADWV01000003.1| GENE 21 21212 - 21592 505 126 aa, chain - ## HITS:1 COG:STM1104 KEGG:ns NR:ns ## COG: STM1104 COG3232 # Protein_GI_number: 16764462 # Func_class: E Amino acid transport and metabolism # Function: 5-carboxymethyl-2-hydroxymuconate isomerase # Organism: Salmonella typhimurium LT2 # 1 126 1 126 126 219 81.0 7e-58 MPHFIVECSDNIREEADLPGLFAKVNPTLAATGIFPLAGIRSRVHWVDTWQMADGQRDYA FVHMTLKIGAGRSLESRQQAGEMLFELIKTHFAALMESRLLALSFEIEELHPTLNFKQNN VHALFK >gi|299856448|gb|ADWV01000003.1| GENE 22 21602 - 22453 920 283 aa, chain - ## HITS:1 COG:STM1103 KEGG:ns NR:ns ## COG: STM1103 COG3384 # Protein_GI_number: 16764461 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 283 1 283 283 572 93.0 1e-163 MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEISKRCREMGVDTIIVFDTHWLV NSAYHINCADHFEGVYTSNELPHFIRDMTYNYEGNPELGQLIADEALKLGVRAKAHNIPS LKLEYGTLVPMRYMNEDKHFKVVSISAFCTVHDFADSRKLGEAILKAIEQYDGTVAVLAS GSLSHRFIDDQRAEEGMNSYTREFDRQMDERVVKLWREGQFKEFCNMLPEYADYCYGEGN MHDTVMLLGMLGWDKYDGKVEFITELFPSSGTGQVNAVFPLPA >gi|299856448|gb|ADWV01000003.1| GENE 23 22455 - 23921 1677 488 aa, chain - ## HITS:1 COG:STM1102 KEGG:ns NR:ns ## COG: STM1102 COG1012 # Protein_GI_number: 16764460 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 488 1 488 488 991 98.0 0 MKKVNHWINGKNVAGNDYFQTTNPATGEVLADVASGGEAEINQAVAAAKEAFPKWANLPM KERARLMRRLGDLIDQNVPEIAAMETADTGLPIHQTKNVLIPRASHNFEFFAEVCQQMNG KTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAPCLALGNTAVLKMSELSPLTA DRLGELALEAGIPAGVLNVVQGYGATAGDALVRHHDVRAVSFTGGTATGRNIMKNAGLKK YSMELGGKSPVLIFEDADIERALDAALFTIFSINGERCTAGSRIFIQQSIYPEFVKRFAE RANRLRVGDPNDPNTQVGALISQQHWEKVSGYIRLGIEEGATLLAGGPDKPSDLPAHLKG GNFLRPTVLADVDNRMRVAQEEIFGPVACLLPFKDEAEGLRLANDVEYGLASYIWTQDVS KVLRLARGIEAGMVFVNTQNVRDLRQPFGGVKASGTGREGGEYSFEVFAEMKNVCISMGD HPIPKWGV >gi|299856448|gb|ADWV01000003.1| GENE 24 23918 - 25207 1300 429 aa, chain - ## HITS:1 COG:STM1101 KEGG:ns NR:ns ## COG: STM1101 COG0179 # Protein_GI_number: 16764459 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Salmonella typhimurium LT2 # 1 429 1 429 429 676 83.0 0 MKGTIFAVALNHRSQLDAWQEAFQQSPYKAPPKTAVWFIKPRNTVIGCGEPIPFPQGEKV LSGATVALIVGKTATKVREEDAAEYIAGYALANDVSLPEESFYRPAIKAKCRDGFCPIGE TVALSNVDNLTIYTEINGRPADHWNTADLQRNAAQLLSALSEFATLNPGDAILLGTPQAR VEIQPGDRVRVLAEGFPPLENPVVDEREVTTRKSFPTQPHPHGTLFALGLNYADHASELE FKPPEEPLVFLKAPNTLTGDNQTSVRPNNIEYMHYEAELVVVIGKQARNVSEADAMDYVA GYTVCNDYAIRDYLENYYRPNLRVKSRDGLTPMLSTIVPKEAIPDPHNLTLRTFVNGELR QQGTTADLIFSVPFLIAYLSEFMTLNPGDMIATGTPKGLSDVVPGDEVVVEVEGVGRLVN RIVSEETAK >gi|299856448|gb|ADWV01000003.1| GENE 25 25479 - 25925 435 148 aa, chain + ## HITS:1 COG:STM1100 KEGG:ns NR:ns ## COG: STM1100 COG1846 # Protein_GI_number: 16764458 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 124 1 124 146 199 83.0 1e-51 MHDSLTIALLQAREAAMSYFRPIVKRHNLTEQQWRIVRILAESPSMDFHDLAYRACILRP SLTGILTRMERDGLVLRLKPINDQRKLYISLTKEGQALYNRAQTQIEEAYRQIEAQFTAE KMQQLTHLLEEFIALGNSRQEAIPGDNE >gi|299856448|gb|ADWV01000003.1| GENE 26 26044 - 27708 1635 554 aa, chain + ## HITS:1 COG:ECs5315 KEGG:ns NR:ns ## COG: ECs5315 COG0840 # Protein_GI_number: 15834569 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli O157:H7 # 1 554 1 554 554 895 99.0 0 MLKRIKIVTSLLLVLAVFGLLQLTSGGLFFNALKNDKENFTVLQTIRQQQSTLNGSWVAL LQTRNTLNRAGIRYMMDQNNIGSGSTVAELMQSASISLKQAEKNWADYEALPRDPRQSTA AAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQDGFEKQYVAYMEQNDRLYDI AVSDNNASYSQAMWILVGVMIVVLAVIFAVWFGIKASLVAPMNRLIDSIRHIAGGDLVKP IEVDGSNEMGQLAESLRHMQGELMRTVGDVRNGANAIYSGASEIATGNNDLSSRTEQQAA SLEETAASMEQLTATVKQNAENARQASHLALSASETAQRGGKVVDNVVQTMRDISTSSQK IADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSL IEDSVGKVDVGSTLVESAGETMAEIVSAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEM DRVTQQNAALVEESAAAAAALEEQASRLTEAVAVFRIQQQQQQQRETSAVVKTVTPAAPR KMAVADSEENWETF >gi|299856448|gb|ADWV01000003.1| GENE 27 27757 - 29118 1259 453 aa, chain - ## HITS:1 COG:yjiZ KEGG:ns NR:ns ## COG: yjiZ COG0477 # Protein_GI_number: 16132177 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 453 1 453 453 880 99.0 0 MEKENITLDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAMLLLFFAAVINYLDRSS LSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLDRKGPRLMLGLGMFFWSLF QAMSGMVHNFTQFVLVRIGMGIGEAPMNPCGVKVINDWFNIKERGRPMGFFNAASTIGVA VSPPILAAMMLVMGWRGMFITIGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNA RRDPLSFAEWRSLFRNRTMWGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMAA IPFLFGAAGMLVNGYVTDWLVKGGMAPIKSRKICIIAGMFCSAAFTLVVPQATTSMTAVL LIGMALFCIHFAGTSCWGLIHVAVASRMTASVGSIQNFASFICASFAPIITGFIVDTTHS FRLALIICGCVTAAGALAYIFLVRQPINDPRKD >gi|299856448|gb|ADWV01000003.1| GENE 28 29333 - 30247 491 304 aa, chain - ## HITS:1 COG:ECs5317 KEGG:ns NR:ns ## COG: ECs5317 COG1802 # Protein_GI_number: 15834571 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 37 304 1 268 268 512 99.0 1e-145 MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTTVRHILSHLRECGVLTQ VGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTMINQRQLRPGETFSELQLARAAG VSPVLVREYLLKFGRYNLIHSEKRGQWSMKQFDQSYAEQLFELREMLETHSLQHFLNLPD HDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHSLLLSAADNIFFDQSLEIISVIF HFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLDATLALRNHLNSAKQSMIRSINENT RYAH >gi|299856448|gb|ADWV01000003.1| GENE 29 30386 - 31408 1113 340 aa, chain + ## HITS:1 COG:yjjN KEGG:ns NR:ns ## COG: yjjN COG1063 # Protein_GI_number: 16132179 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 340 6 345 345 674 100.0 0 MSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDIHAWGGNQPFFSYPRVL GHEICGEIVGLGKNIADLKNGQQVAVIPYVACQQCPACKSGRTNCCEKISVIGVHQDGGF SEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAIAPGEQVLVVGAGPIGLGAAA IAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDFDAQLRAQFGGSLAQKVIDATGN QHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHKKETTMMGSRNATPEDFAKVGRLMA EGKITADMMLTHRYPFATLAETYERDVINNRELIKGVITF >gi|299856448|gb|ADWV01000003.1| GENE 30 31547 - 33838 2229 763 aa, chain - ## HITS:1 COG:mdoB KEGG:ns NR:ns ## COG: mdoB COG1368 # Protein_GI_number: 16132180 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Escherichia coli K12 # 14 763 1 750 750 1514 99.0 0 MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNITLFASDYFTGDGINDAV LYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRRRRHHPHHFGYSLLALLLALG SVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDPKLNLVYIYGESLERTYFDNE AFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVASQCGIPLFAPFEGNASASVSSFF PQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEELKSVVADPHYRND WGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHHPDGFISRTCNRKKYDFDGKPNQS FSAVSCSQENIAAFINKIKASPWFKDTVIVVSSDHLAMNNTAWKYLNKQDRNNLFFVIRD DKPQQETLAVKRNTMDNGATVLDILGGDNYLGLGRSSLSGQSMSEIFLNIKEKTLAWKPD IIRLWKFPKEMKEFTIDQQKNMIAFSGSHFRLPLLLRVSDKRVEPLPESEYSAPLRFQLA DFAPRDNFVWVDRCYKMAQLWAPELALSTDWCVSQGQLGGQQIVQHVDKTMWKGKTAFKD TVIDMARYKSNVDTLKIVDNDIRYKADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQL GDEVKIEYKHPLPKKFDLVITAKAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNP TDADTLVIVPPEPVSTNEGNILGHSPRKLGIGMVEIKVVEREG >gi|299856448|gb|ADWV01000003.1| GENE 31 34092 - 34583 496 163 aa, chain - ## HITS:1 COG:no KEGG:S4661 NR:ns ## KEGG: S4661 # Name: yjjA # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 163 3 165 165 264 99.0 1e-69 MKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNSTTQEGGWSLASLTNLLS SGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLEKLGLNSEEQKEDTNYLDGI QGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGLNFIS >gi|299856448|gb|ADWV01000003.1| GENE 32 34635 - 35372 772 245 aa, chain - ## HITS:1 COG:ECs5321 KEGG:ns NR:ns ## COG: ECs5321 COG1484 # Protein_GI_number: 15834575 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 473 100.0 1e-133 MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAALERENRAMKMQRTFNRS GIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAIC NELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDLSNVDLLVIDEIGVQTESKYE KVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVMDRMRLGNSLWVIFNWDSYRSRV TGKEY >gi|299856448|gb|ADWV01000003.1| GENE 33 35375 - 35914 545 179 aa, chain - ## HITS:1 COG:ECs1768 KEGG:ns NR:ns ## COG: ECs1768 COG5529 # Protein_GI_number: 15831022 # Func_class: R General function prediction only # Function: Pyocin large subunit # Organism: Escherichia coli O157:H7 # 78 153 184 266 346 76 51.0 3e-14 MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKL ARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVATEE LASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPKRDVNTVSEPDSQIPPGFRG >gi|299856448|gb|ADWV01000003.1| GENE 34 36021 - 36494 444 157 aa, chain - ## HITS:1 COG:STM4545 KEGG:ns NR:ns ## COG: STM4545 COG3610 # Protein_GI_number: 16767789 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 157 1 157 157 244 88.0 4e-65 MGVIEFLLALAQDMILAAIPAVGFAMVFNVPVRALRWCALLGAIGHGSRMILMTSGLNIE WSTFMASMLVGTIGIQWSRWYLAHPKVFTVAAVIPMFPGISAYTAMISAVKISQLGYSEP LMITLLTNFLTASSIVGALSIGLSIPGLWLYRKRPRV >gi|299856448|gb|ADWV01000003.1| GENE 35 36485 - 37309 405 274 aa, chain - ## HITS:1 COG:yjjP KEGG:ns NR:ns ## COG: yjjP COG2966 # Protein_GI_number: 16132185 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 274 4 277 277 542 99.0 1e-154 MDSHYLNNTQHVYDKGRVMQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALG MDSVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGV EKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWDGAVITFFASTAAMYIRQLLAQRH LHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFKGHI NTGLARWAIASLLTLATCVGVVMALTIWGLRGWV >gi|299856448|gb|ADWV01000003.1| GENE 36 37925 - 38599 300 224 aa, chain + ## HITS:1 COG:ECs5325 KEGG:ns NR:ns ## COG: ECs5325 COG2197 # Protein_GI_number: 15834579 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 224 18 241 241 423 99.0 1e-118 MQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLI SQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLT SPAMNETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLA IHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS >gi|299856448|gb|ADWV01000003.1| GENE 37 38611 - 39234 303 207 aa, chain + ## HITS:1 COG:ECs5326 KEGG:ns NR:ns ## COG: ECs5326 COG2197 # Protein_GI_number: 15834580 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 207 19 225 225 395 99.0 1e-110 MSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLT ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS SDAGLLEAADILLCMRHCEASNVLHPY >gi|299856448|gb|ADWV01000003.1| GENE 38 39272 - 40060 625 262 aa, chain - ## HITS:1 COG:ECs5327 KEGG:ns NR:ns ## COG: ECs5327 COG4114 # Protein_GI_number: 15834581 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 518 98.0 1e-147 MAYRSAPLYEDVIWRTHLQPQDAGLAQAVRATIAEHREHLLEFIRLDEPAPLNAMTLAQW SSPNALSSLLAVYSDHIYRNQPTMIRENKPLISLWAQWYIGLMVPPLMLALLTQEKALDV SPEHFHAEFHETGRAACFWVDVCEDKNATPHSPQQRMERLISQALVPVVQALEATGEING KLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEKTLTTGEDNPLWRTVVLRDGLLV RRTCCQRYRLPDVQQCGDCTLK >gi|299856448|gb|ADWV01000003.1| GENE 39 40200 - 40436 218 78 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E4910 NR:ns ## KEGG: SbBS512_E4910 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 78 38 115 115 120 98.0 1e-26 MLQRTLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLVLTSVMLYHKQLRHYVLLPS CLALIAAIMLMIMNLNQG >gi|299856448|gb|ADWV01000003.1| GENE 40 41066 - 42097 264 343 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative [marine gamma proteobacterium HTCC2148] # 78 334 106 368 371 106 30 1e-21 MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMG DNARFSLVATADDVADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRS AEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWGEYSVDGLTVKTLPGVFSRDG LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL AANCVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELR IVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAIMTRQAKKG >gi|299856448|gb|ADWV01000003.1| GENE 41 42200 - 42613 376 137 aa, chain + ## HITS:1 COG:ECs5330 KEGG:ns NR:ns ## COG: ECs5330 COG3050 # Protein_GI_number: 15834584 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, psi subunit # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 253 100.0 6e-68 MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRA LTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQVASPALTELRANPTARAA LWQQICTYEHDFFPRND >gi|299856448|gb|ADWV01000003.1| GENE 42 42582 - 43028 749 148 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804944|ref|NP_290986.1| ribosomal-protein-alanine N-acetyltransferase [Escherichia coli O157:H7 EDL933] # 1 148 1 148 148 293 99 7e-78 MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQLTQNGKMAAFAITQVV LDEATLFNIAVDPDYQRQGLGRVLLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGF NEATIRRNYYPTTDGREDAIIMALPISM >gi|299856448|gb|ADWV01000003.1| GENE 43 43043 - 43720 740 225 aa, chain + ## HITS:1 COG:ECs5332 KEGG:ns NR:ns ## COG: ECs5332 COG1011 # Protein_GI_number: 15834586 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 462 98.0 1e-130 MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITS LQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGF SALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAES DILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHELEQLLCKH >gi|299856448|gb|ADWV01000003.1| GENE 44 43811 - 45400 2021 529 aa, chain + ## HITS:1 COG:ECs5333 KEGG:ns NR:ns ## COG: ECs5333 COG4108 # Protein_GI_number: 15834587 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Escherichia coli O157:H7 # 1 529 1 529 529 1087 99.0 0 MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWM EMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVE DRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFK GVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNE FDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFV FKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAGDRSHVEEAY PGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLS EEGAVQVFRPISNNDLIVGAVGVLQFDVVVSRLKSEYNVEAVYESVNVATARWVECADAK KFEEFKRKNESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH >gi|299856448|gb|ADWV01000003.1| GENE 45 45793 - 46398 777 201 aa, chain + ## HITS:1 COG:ECs5334 KEGG:ns NR:ns ## COG: ECs5334 COG2823 # Protein_GI_number: 15834588 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 264 99.0 8e-71 MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAIT AKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLH VRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDR AESIAKAVDGVKSVKNDLKTK >gi|299856448|gb|ADWV01000003.1| GENE 46 46525 - 46686 195 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|157368899|ref|YP_001476888.1| ## NR: gi|157368899|ref|YP_001476888.1| hypothetical protein Spro_0654 [Serratia proteamaculans 568] # 1 53 33 85 85 77 92.0 4e-13 MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLVSLFMGRKRP >gi|299856448|gb|ADWV01000003.1| GENE 47 46808 - 47881 879 357 aa, chain + ## HITS:1 COG:ECs5335 KEGG:ns NR:ns ## COG: ECs5335 COG4667 # Protein_GI_number: 15834589 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Escherichia coli O157:H7 # 1 357 1 357 357 731 100.0 0 MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGT SAGAQNLSAYICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQ MDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGIN YLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQ HHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLAT VGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA >gi|299856448|gb|ADWV01000003.1| GENE 48 47878 - 48660 794 260 aa, chain + ## HITS:1 COG:yjjVm KEGG:ns NR:ns ## COG: yjjVm COG0084 # Protein_GI_number: 16132266 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli K12 # 1 258 1 258 259 494 95.0 1e-140 MICRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVQALAEKYQPLY AALGLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQL KLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFSGSLQQAERFVQLGYKIGVGG TITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQANRPEQAARVFAVLCELRSEP ADEIAEVLLNNTYAVFSVSG >gi|299856448|gb|ADWV01000003.1| GENE 49 48773 - 49507 597 244 aa, chain - ## HITS:1 COG:yjjW KEGG:ns NR:ns ## COG: yjjW COG1180 # Protein_GI_number: 16132196 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli K12 # 1 244 44 287 287 488 97.0 1e-138 MGRCNDCGECVPQCPHQALQIVDGKVVWNAVVCEQCDTCLKRCPQHATPMAQSMSVDEVL SHVRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETGWEK LLPVCDGAMLDLKAWGSECHQQLTGRDNQQIKRSICLLAERGKLAELRLLVIPDQVDYLH HIDELATFIKRLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRGVSRLIFP ALYL >gi|299856448|gb|ADWV01000003.1| GENE 50 49608 - 51158 1443 516 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_4603 NR:ns ## KEGG: ECIAI1_4603 # Name: yjjI # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 516 1 516 516 1074 100.0 0 MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDM FEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLG QLDALLQPYVRILTQDEIDVRIKRFWRYLDRTLPDAFMHANIGPSDSPITRAILRADAEL KQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSL PLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENS FLVKEGLINPERFVPMFGMYGLAEAVNLLCKKEGIAARYGKEAAANEVGYRISAQLAEFV ANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGIS DILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEG SRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ >gi|299856448|gb|ADWV01000003.1| GENE 51 51416 - 52195 1017 259 aa, chain + ## HITS:1 COG:ECs5340 KEGG:ns NR:ns ## COG: ECs5340 COG0274 # Protein_GI_number: 15834594 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 446 100.0 1e-125 MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTL KEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFD LVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPE SARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGASSL LASLLKALGHGDGKSASSY >gi|299856448|gb|ADWV01000003.1| GENE 52 52322 - 53644 1794 440 aa, chain + ## HITS:1 COG:ZdeoA KEGG:ns NR:ns ## COG: ZdeoA COG0213 # Protein_GI_number: 15804954 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Escherichia coli O157:H7 EDL933 # 1 440 1 440 440 816 100.0 0 MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLT MAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHT GGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSI PLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLT DMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAKDDAEARAKL QAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYLPTAMLTKAVYADTEGFVSEMDTRALG MAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENSWQEAAKAVKAA IKLADKAPESTPTVYRRISE >gi|299856448|gb|ADWV01000003.1| GENE 53 53696 - 54919 1600 407 aa, chain + ## HITS:1 COG:ECs5342 KEGG:ns NR:ns ## COG: ECs5342 COG1015 # Protein_GI_number: 15834596 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Escherichia coli O157:H7 # 1 407 1 407 407 840 100.0 0 MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEADNGRKGPLNLPNLTRLG LAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGHWEIAGVPVLFEWGYFSDH ENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIAC HEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIGDKAGNFQRTGNRHDLAVEPPAP TVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDNTIVFT NFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMSLLRDDDILILTADHGCDPTWTGTDHT REHIPVLVYGPKVKPGSLGHRETFADIGQTLAKYFGTSDMEYGKAMF >gi|299856448|gb|ADWV01000003.1| GENE 54 54999 - 55718 946 239 aa, chain + ## HITS:1 COG:ECs5343 KEGG:ns NR:ns ## COG: ECs5343 COG0813 # Protein_GI_number: 15834597 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 470 100.0 1e-133 MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISV MGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIR FKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVE MEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE >gi|299856448|gb|ADWV01000003.1| GENE 55 55993 - 56142 158 49 aa, chain - ## HITS:1 COG:ECs5344 KEGG:ns NR:ns ## COG: ECs5344 COG1396 # Protein_GI_number: 15834598 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 49 1 49 87 77 95.0 4e-15 MIDLENQEREIINIMLSQRISWLAAVRIRHKLSLAEVSKMLGISINSLK >gi|299856448|gb|ADWV01000003.1| GENE 56 56174 - 57190 1157 338 aa, chain - ## HITS:1 COG:Z5988_2 KEGG:ns NR:ns ## COG: Z5988_2 COG0095 # Protein_GI_number: 15804958 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Escherichia coli O157:H7 EDL933 # 1 338 5 342 342 692 99.0 0 MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRR MEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASG RNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITS VRSRVTNLTELLPGITHEQVCEAITKAFFAHYGERVEAEIISPDKTPDLPNFAETFARQS SWEWNFGQAPAFSHLLDERFSWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQG GLYRADMLQQECEALLVDFPDQEKELRELSTWIAGAVR >gi|299856448|gb|ADWV01000003.1| GENE 57 57218 - 57862 762 214 aa, chain - ## HITS:1 COG:ECs5345_1 KEGG:ns NR:ns ## COG: ECs5345_1 COG3726 # Protein_GI_number: 15834599 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein affecting hemolysin expression # Organism: Escherichia coli O157:H7 # 1 205 1 205 224 366 100.0 1e-101 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT RTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE >gi|299856448|gb|ADWV01000003.1| GENE 58 57968 - 58936 1165 322 aa, chain + ## HITS:1 COG:ECs5346 KEGG:ns NR:ns ## COG: ECs5346 COG0560 # Protein_GI_number: 15834600 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Escherichia coli O157:H7 # 1 322 1 322 322 638 100.0 0 MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYGRGLDKQRLTQYQSKLG AAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLGKIPHLRTPGLLVMDMDST AIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANILQQVRENL PLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKLRLTAVVANELEIMDGKFTGNVI GDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEKAE VTIRHADLMGVFCILSGSLNQK >gi|299856448|gb|ADWV01000003.1| GENE 59 58985 - 60367 1480 460 aa, chain + ## HITS:1 COG:ECs5347 KEGG:ns NR:ns ## COG: ECs5347 COG1066 # Protein_GI_number: 15834601 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Escherichia coli O157:H7 # 1 460 1 460 460 902 100.0 0 MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL >gi|299856448|gb|ADWV01000003.1| GENE 60 60388 - 61620 1302 410 aa, chain + ## HITS:1 COG:nadR_3 KEGG:ns NR:ns ## COG: nadR_3 COG3172 # Protein_GI_number: 16132207 # Func_class: H Coenzyme transport and metabolism # Function: Predicted ATPase/kinase involved in NAD metabolism # Organism: Escherichia coli K12 # 224 410 1 187 187 382 99.0 1e-106 MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPSAQKLEALHRFLGLEFP RQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDDTRDRALFEDSAMSQQPTV PDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNGIKKFMAEKGIQPDLIYTSEE ADAPQYMEHLGIDTVLVDPKRTFMSISGAQIRENPFRYWEYIPTEVKPFFVRTVAILGGE SSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEIALQYSDYDKIALGHAQYIDFAVK YANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLG SSVDRKEFQNLLVEMLEENNIEFVRVEEDDYDSRFLRCVELVREMMGEQR >gi|299856448|gb|ADWV01000003.1| GENE 61 61927 - 63594 2302 555 aa, chain - ## HITS:1 COG:ECs5349 KEGG:ns NR:ns ## COG: ECs5349 COG0488 # Protein_GI_number: 15834603 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 555 1 555 555 1104 100.0 0 MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIE GEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPDADFDK LAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEK PDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPW EGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEELNST EYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGA GKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNT EMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETL RALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGA DALEPKRIKYKRIAK >gi|299856448|gb|ADWV01000003.1| GENE 62 63805 - 65742 1808 645 aa, chain + ## HITS:1 COG:ECs5350 KEGG:ns NR:ns ## COG: ECs5350 COG0741 # Protein_GI_number: 15834604 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli O157:H7 # 1 645 10 654 654 1246 99.0 0 MEKAKQVTWRLLAAGVCLLTVSSVARADSLDEQRSRYAQIKQAWDNRQMDVVEQMMPGLK DYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQSRFVNELARREDWRGLLA FSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKSQPNACDKLFSVWRASGKQD PLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAIISLANNPNTVLTFVRTTGATDF TRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAK WRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERG REAEAKEILHQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMY WNLDNTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAGKLWDHLEERFPLAY NDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGASGLMQIMPGTATHTVKMFSIPG YSSPGQLLDPETNINIGTSYLQYVYQQFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAV AFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY >gi|299856448|gb|ADWV01000003.1| GENE 63 65832 - 66158 379 108 aa, chain + ## HITS:1 COG:ECs5351 KEGG:ns NR:ns ## COG: ECs5351 COG2973 # Protein_GI_number: 15834605 # Func_class: K Transcription # Function: Trp operon repressor # Organism: Escherichia coli O157:H7 # 1 108 1 108 108 166 100.0 9e-42 MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEE LLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLLKSD >gi|299856448|gb|ADWV01000003.1| GENE 64 66243 - 66764 395 173 aa, chain - ## HITS:1 COG:ECs5352 KEGG:ns NR:ns ## COG: ECs5352 COG1986 # Protein_GI_number: 15834606 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 170 4 173 173 323 97.0 1e-88 MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQPFGSEETRAGARNRVA NARRLLPEADFWVAIEAGIDGDSTFSWVVIENTSQRGEARSATLPLPAVILQKVREGEAL GPVMSRYTGIDEIGRKEGAIGVFTAWKLTRASVYHQAVILALSPFHNAVYQAL >gi|299856448|gb|ADWV01000003.1| GENE 65 66816 - 67463 677 215 aa, chain + ## HITS:1 COG:ECs5353 KEGG:ns NR:ns ## COG: ECs5353 COG0406 # Protein_GI_number: 15834607 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 406 100.0 1e-113 MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAKELGITHIISSDLGRTR RTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIPEGE SMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVSTILGLPAWAERRLRLRNCSIS RVDYQESLWLASGWVVETAGDISHLDAPALDELQR >gi|299856448|gb|ADWV01000003.1| GENE 66 67460 - 68329 981 289 aa, chain - ## HITS:1 COG:ECs5354 KEGG:ns NR:ns ## COG: ECs5354 COG2207 # Protein_GI_number: 15834608 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 597 100.0 1e-171 MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLS KSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRL GEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYG LNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFI LTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRPINLRCELLIPIRR >gi|299856448|gb|ADWV01000003.1| GENE 67 68540 - 69013 518 157 aa, chain + ## HITS:1 COG:ECs5355 KEGG:ns NR:ns ## COG: ECs5355 COG3045 # Protein_GI_number: 15834609 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 291 100.0 3e-79 MKYKHLILSLSLIMLGPLAHAEEIGSVDTVFKMIGPDHKIVVEAFDDPDVKNVTCYVSRA KTGGIKGGLGLAEDTSDAAISCQQVGPIELSDRIKNGKAQGEVVFKKRTSLVFKSLQVVR FYDAKRNALAYLAYSDKVVEGSPKNAISAVPVMPWRQ >gi|299856448|gb|ADWV01000003.1| GENE 68 69026 - 69715 623 229 aa, chain + ## HITS:1 COG:creB KEGG:ns NR:ns ## COG: creB COG0745 # Protein_GI_number: 16132215 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 229 1 229 229 443 97.0 1e-125 MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARQLVPDVIILDVGLPDI SGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYVAKPFSPREVCARVRTLLR RVKKFSSPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEFLLLKTLLKSPGRVWSRQQLM DSVWEDAQDTYDRTVDTHIKTLRAKLRAINPDLSPINTHRGMGYSLRGL >gi|299856448|gb|ADWV01000003.1| GENE 69 69715 - 71139 1218 474 aa, chain + ## HITS:1 COG:creC KEGG:ns NR:ns ## COG: creC COG0642 # Protein_GI_number: 16132216 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 474 1 474 474 910 99.0 0 MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLIDTATLLAELARPDLLSG DPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDSQGKVLFDSANKAVGQDYSRW NDVWLTLRGQYGARSTLQNPADPESSVMYVAAPIMDGSRLIGVLSVGKPNAAMAPVIKRS ERRILWASAILLGIALVIGAGMVWWINRSIARLTRYADSVTDNKPVPLPDLGSSELRKLA QALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRGAAEILREGPPPEVVARFTDNILTQ NARMQALVETLLRQARLENRQEVVLTAVDVAALFRRVSEARTVQLAEKNITLHVTPTEVN VAAEPALLDQALGNLLDNAIDFTPESGRITLSAEVDQEHVTLKVLDTGSGIPDYALSRIF ERFYSLPRANGQKSSGLGLAFVSEVARLFNGEVTLRNVQEGGVLASLRLHRHFT >gi|299856448|gb|ADWV01000003.1| GENE 70 71197 - 72549 1213 450 aa, chain + ## HITS:1 COG:ECs5358 KEGG:ns NR:ns ## COG: ECs5358 COG4452 # Protein_GI_number: 15834612 # Func_class: V Defense mechanisms # Function: Inner membrane protein involved in colicin E2 resistance # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 842 98.0 0 MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDAIRQSTSGPQKLVGPLI AIPVTELYTVQEDDKTVERKRSFIHFWLPESLMVDGNQNVEERKIGIYTGQVWHSDLTLK ADFDVSRLSELDAPNITLGKPFIVISVGDARGIGVVKAPEVNGTALTIEPGTGLEQGGQG VHIPLPEGDWRKQNLKLNMALNLSGTGDLSVVPAGRNSEMTLTSNWPHPSFLGDFLPAKR EVSESGFQAQWQSSWFANNLGERFASGNDTGWENFPAFSVAVTTPADQYQLTDRATKYAI LLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLVMFYLLLLALSEHTGFTVAWIIASLIG ALMNGIYLQAVLKGWRNSMLFTLALLLLDGVMWGLLNSADSALLLGTSVLVVALAGMMFV TRNIDWYAFSLPKMKASKEVTMDDQLRIWK >gi|299856448|gb|ADWV01000003.1| GENE 71 72609 - 73325 893 238 aa, chain - ## HITS:1 COG:ECs5359 KEGG:ns NR:ns ## COG: ECs5359 COG0745 # Protein_GI_number: 15834613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 470 100.0 1e-133 MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGK NGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR TMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQ SRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED >gi|299856448|gb|ADWV01000003.1| GENE 72 73961 - 74647 544 228 aa, chain + ## HITS:1 COG:ECs5361 KEGG:ns NR:ns ## COG: ECs5361 COG0565 # Protein_GI_number: 15834615 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 422 97.0 1e-118 MRITIILIAPARAENIGAAARAMKTMGFSELRIVDSQAHLEPATRWVAHGSGDIIDNIKV FPTLVESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLT NEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQQPAKSDTTADQHQLQALRER VMALLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRLLHDIEKNITK >gi|299856448|gb|ADWV01000003.1| GENE 73 75007 - 77469 2285 820 aa, chain + ## HITS:1 COG:thrA_1 KEGG:ns NR:ns ## COG: thrA_1 COG0527 # Protein_GI_number: 16127996 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Escherichia coli K12 # 1 460 1 460 460 911 100.0 0 MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDA LPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINA ALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHYLESTVDIAESTRRIAASRIP ADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYTCDPRQV PDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQFQIPCLIKNTGNPQAPGTLIGASRD EDELPVKGISNLNNMAMFSVSGPGMKGMVGMAARVFAAMSRARISVVLITQSSSEYSISF CVPQSDCVRAERAMQEEFYLELKEGLLEPLAVTERLAIISVVGDGMRTLRGISAKFFAAL ARANINIVAIAQGSSERSISVVVNNDDATTGVRVTHQMLFNTDQVIEVFVIGVGGVGGAL LEQLKRQQSWLKNKHIDLRVCGVANSKALLTNVHGLNLENWQEELAQAKEPFNLGRLIRL VKEYHLLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHLLRHAAEKSR RKFLYDTNVGAGLPVIENLQNLLNAGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLA REMGYTEPDPRDDLSGMDVARKLLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMA NLSQLDDLFAARVAKARDEGKVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAF YSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSWKLGV >gi|299856448|gb|ADWV01000003.1| GENE 74 77471 - 78403 769 310 aa, chain + ## HITS:1 COG:ECs0003 KEGG:ns NR:ns ## COG: ECs0003 COG0083 # Protein_GI_number: 15829257 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 638 99.0 0 MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETFGLNNLGRFADKLPSEP RENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACSVVAALMAMNEHCGKPLND TRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDIISQQVPGFDEWLWVLAYPGI KVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQPELAAKLMKDVIAEPYRERLLP GFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTAQRVADWLGKNYLQNQEGFVHICRL DTAGARVLEN >gi|299856448|gb|ADWV01000003.1| GENE 75 78404 - 79690 1497 428 aa, chain + ## HITS:1 COG:ECs0004 KEGG:ns NR:ns ## COG: ECs0004 COG0498 # Protein_GI_number: 15829258 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 843 100.0 0 MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILS AFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTH IAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETV AIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQEARNQ LVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNA MDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRA LRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAAL RKLMMNHQ >gi|299856448|gb|ADWV01000003.1| GENE 76 79904 - 80200 156 98 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0005 NR:ns ## KEGG: ECUMN_0005 # Name: yaaX # Def: conserved hypothetical protein; putative exported protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 84 1 84 98 134 98.0 7e-31 MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQH YEWRGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR >gi|299856448|gb|ADWV01000003.1| GENE 77 80353 - 81129 871 258 aa, chain - ## HITS:1 COG:yaaA KEGG:ns NR:ns ## COG: yaaA COG3022 # Protein_GI_number: 16128000 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 258 1 258 258 508 99.0 1e-144 MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPPQISTLMRISDKLAGIN AARFHDWQPDFTPENARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRP LDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVK PKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFF DEDSSSNGELVFKRYEQR >gi|299856448|gb|ADWV01000003.1| GENE 78 81199 - 82629 808 476 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 [Haemophilus influenzae PittAA] # 6 447 8 446 456 315 40 1e-84 MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFGKSLKNSIHPQPGGLTS FQSLCTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIGMATSFAECSLAQLYKERD VNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSGVQANAVARALSFSFDFPPLV TGIILAVFALLAITRGLHGVARLMQGFVPLMAIIWVLTSMVICVINIGQLPHVIWSIFES AFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMGSTPNAAAAAASWPPHPAAQGIVQM IGIFIDTLVICTASAMLILLAGNDTTYMPLEGIQLIQKAMRVLMGSWGAEFVTLVVILFA FSSIVANYIYAENNLFFLRLNNPKAIWCLRICTFATVIGGTLLSLPLMWQLADIIMACMA ITNLTAILLLSPVVHTIASDYLRQRKLGVRPVFDPLRYPDIGRQLSPDAWDDVSQE >gi|299856448|gb|ADWV01000003.1| GENE 79 82908 - 83861 1221 317 aa, chain + ## HITS:1 COG:ECs0008 KEGG:ns NR:ns ## COG: ECs0008 COG0176 # Protein_GI_number: 15829262 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 608 99.0 1e-174 MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAK QQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYN DAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPFVG RILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCD RLTIAPTLLKELAESEGAIERKLSYTGEVKARPARITESEFLWQHNQDPMAVDKLAEGIR KFAIDQEKLEKMIGDLL >gi|299856448|gb|ADWV01000003.1| GENE 80 83976 - 84563 688 195 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|134277849|ref|ZP_01764564.1| ribosomal protein S16 [Burkholderia pseudomallei 305] # 6 191 2 191 194 269 73 8e-71 MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCE LVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSRQV GVIRKQALILNLPGQPKSIKETLEGVKDAAGNVVVHGIFASVPYCIQLLEGPYVETAPEV VAAFRPKSARRDVSE >gi|299856448|gb|ADWV01000003.1| GENE 81 84598 - 85164 704 188 aa, chain - ## HITS:1 COG:ECs0010 KEGG:ns NR:ns ## COG: ECs0010 COG1584 # Protein_GI_number: 15829264 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 299 100.0 2e-81 MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIFYGGIAQIFAGLLEYKK GNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVYLGLWGVFTLFMFFGTLKG ARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLICGASAIYLAMGEVLNEQFGRT VLPIGESH >gi|299856448|gb|ADWV01000003.1| GENE 82 85313 - 86026 630 237 aa, chain - ## HITS:1 COG:yaaW KEGG:ns NR:ns ## COG: yaaW COG4735 # Protein_GI_number: 16128005 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 237 1 237 237 394 99.0 1e-110 MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLMRNELFKSMEGHPEQHR RNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKLKADKEMSTFEIEQQLLEQ FLRNTWKNMDEEHKQEFLHAIDARVNELEELLPLLMKDKLLAKGVSHLLSSQLTRILRTH AAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVTIPAVLQIACLRRMVSATQV >gi|299856448|gb|ADWV01000003.1| GENE 83 86052 - 86456 398 134 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0013 NR:ns ## KEGG: ECO103_0013 # Name: yaaI # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 134 1 134 134 246 100.0 2e-64 MKSVFTISASLAISLMLCCTAQANDHKILGVIAMPRNETNDLALKLPVCRIVKRIQLSAD HGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTV NSSDMATLKIIGDD >gi|299856448|gb|ADWV01000003.1| GENE 84 86833 - 88749 2320 638 aa, chain + ## HITS:1 COG:ECs0014 KEGG:ns NR:ns ## COG: ECs0014 COG0443 # Protein_GI_number: 15829268 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli O157:H7 # 1 638 1 638 638 1106 100.0 0 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVT NPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVL KKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG LDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYL VEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKV TRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKE PRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPT KHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDA DGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGD HLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLME IAQQQHAQQQTAGADASANNAKDDDVVDAEFEEVKDKK >gi|299856448|gb|ADWV01000003.1| GENE 85 88838 - 89968 1184 376 aa, chain + ## HITS:1 COG:ECs0015 KEGG:ns NR:ns ## COG: ECs0015 COG0484 # Protein_GI_number: 15829269 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Escherichia coli O157:H7 # 1 376 1 376 376 698 100.0 0 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDS QKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYN MELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQ QTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPAGVDTGDRIRLAGEGEAGEHGAP AGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVKLKVPGETQTG KLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLNEKQKQLLQELQESFGGPTGEHNSPRS KSFFDGVKKFFDDLTR >gi|299856448|gb|ADWV01000003.1| GENE 86 90072 - 90224 123 50 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0016 NR:ns ## KEGG: ECO103_0016 # Name: mokC # Def: regulatory protein MokC for HokC # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 50 20 69 69 74 100.0 1e-12 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE >gi|299856448|gb|ADWV01000003.1| GENE 87 90810 - 91976 1297 388 aa, chain + ## HITS:1 COG:ECs0017 KEGG:ns NR:ns ## COG: ECs0017 COG3004 # Protein_GI_number: 15829271 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Escherichia coli O157:H7 # 1 388 1 388 388 632 100.0 0 MKHLHRFFSSDASGGIILIIAAILAMMMANSGATSGWYHDFLETPVQLRVGSLEINKNML LWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADP ITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYTNDLS MASLGVAAVAIAVLAVLNLCGVRRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLK EKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGK PLGISLFCWLALRLKLAHLPEGTTYQQIMAVGILCGIGFTMSIFIASLAFGSVDPELINW AKLGILVGSISSAVIGYSWLRVRLRPSV >gi|299856448|gb|ADWV01000003.1| GENE 88 92042 - 92941 790 299 aa, chain + ## HITS:1 COG:nhaR KEGG:ns NR:ns ## COG: nhaR COG0583 # Protein_GI_number: 16128014 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 299 3 301 301 627 99.0 1e-180 MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFKRKGRGLEP SELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSSVLNAAVVEGE PIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSFWCTNPPPE KPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGAMHNAIFV APTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSALFSPAAR >gi|299856448|gb|ADWV01000003.1| GENE 89 93157 - 93405 229 82 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0019 NR:ns ## KEGG: ECIAI1_0019 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 82 179 260 319 168 100.0 5e-41 MTCGFEDQSIDTGRFVLSRINNENYQFHHIRFDCIQGEQGELVFEPSDVEYYFEPVTIQE SGTSILKNELENSEDGAGQVGF >gi|299856448|gb|ADWV01000003.1| GENE 90 93951 - 95096 452 381 aa, chain - ## HITS:1 COG:ECs0022 KEGG:ns NR:ns ## COG: ECs0022 COG3188 # Protein_GI_number: 15829276 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 381 436 816 816 726 97.0 0 MAAWRYASQDYRTFSDHLYENDKHYHQSDYDDFYDIGRKNSLSANIMQPLSNNLGNVSLS ALWRNYWGRSGNAKDYQFSYSNNWQHISYTFSASQSYDENNKEEERFNLFISIPFYWGDD IAKTRHQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYVNQQQQNNDTSLGTNLS WRTPIAIIDGSYSHSKNAWQSGGSISSGLVVWPGGINITNQLSDTFAILDAPGLEGAHIN GQKYNRTNSKGQVVYDLIIPHRENHLVLDIANSESETELQGNRQIIAPYRGAVSYVQFTT DQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQGSRLFIRVDEIPTGIKVALNDEQ NLFCTITFQHVIDENKTYICQ >gi|299856448|gb|ADWV01000003.1| GENE 91 95529 - 95846 129 105 aa, chain - ## HITS:1 COG:no KEGG:SSON_0027 NR:ns ## KEGG: SSON_0027 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 105 269 373 373 208 100.0 5e-53 MIKNLRCEDIMPGRWTTQLVNKHLGYRYTGVFKTLASIDDKPSRFEILIPLVQTLVRDNV KLNNDVYKELNKFMHDYDKTSSKMRKYLQSINECMLLIKNIVHQD >gi|299856448|gb|ADWV01000003.1| GENE 92 97434 - 97697 422 87 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15799705|ref|NP_285717.1| 30S ribosomal protein S20 [Escherichia coli O157:H7 EDL933] # 1 87 1 87 87 167 98 6e-40 MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDR QAAKGLIHKNKAARHKANLTAQINKLA >gi|299856448|gb|ADWV01000003.1| GENE 93 97800 - 98018 56 72 aa, chain + ## HITS:1 COG:no KEGG:SSON_0029 NR:ns ## KEGG: SSON_0029 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 72 1 72 72 128 100.0 6e-29 MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGHFLPVICAMAMKSHFFLISVLNRRLTLT AVQGILGRFSLF >gi|299856448|gb|ADWV01000003.1| GENE 94 98026 - 98967 391 313 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 1 307 1 312 317 155 33 2e-36 MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPL ELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKF LAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLAL AESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGV ANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDE LTAREFFGLTKPA >gi|299856448|gb|ADWV01000003.1| GENE 95 99010 - 101826 3170 938 aa, chain + ## HITS:1 COG:ileS KEGG:ns NR:ns ## COG: ileS COG0060 # Protein_GI_number: 16128020 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 938 1 938 938 1956 100.0 0 MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYA NGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAA EFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHK GAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIW TTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAE LELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPD GTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQ WFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHK DTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGST HSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQG RKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTAR FLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCS VEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPG EREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAV TLYAEPELSAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEK CPRCWHYTQDVGKVAEHAEICGRCVSNVAGDGEKRKFA >gi|299856448|gb|ADWV01000003.1| GENE 96 101826 - 102320 581 164 aa, chain + ## HITS:1 COG:lspA KEGG:ns NR:ns ## COG: lspA COG0597 # Protein_GI_number: 16128021 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Escherichia coli K12 # 1 164 1 164 164 305 99.0 2e-83 MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSF LADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGF VVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSKAKKQ >gi|299856448|gb|ADWV01000003.1| GENE 97 102408 - 102857 257 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225086978|ref|YP_002658248.1| ribosomal protein S2 [gamma proteobacterium NOR5-3] # 1 144 1 143 148 103 36 8e-21 MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDK TTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDS ITVDFNHPLAGQTVHFDIEVLEIDPALEA >gi|299856448|gb|ADWV01000003.1| GENE 98 102859 - 103809 441 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 1 298 1 287 632 174 34 4e-42 MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQI SEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIG HAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDA LRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGK SAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENI VFEVPKELRVDIREVD >gi|299856448|gb|ADWV01000003.1| GENE 99 103875 - 104789 713 304 aa, chain + ## HITS:1 COG:yaaF KEGG:ns NR:ns ## COG: yaaF COG1957 # Protein_GI_number: 16128024 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli K12 # 1 304 1 304 304 578 98.0 1e-165 MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWNAEI PLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIPAFLAIRDALMRAPEPVTL VAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTPNAEFNFAADPEAAACVFRSG IEIVMCGLDVTNQAILTPDYLATLPELNRTGKMLHALFSHYRSGSMQSGLRMHDLCAIAW LVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVKVALDLDVKGFQQWVAEVL ALAS >gi|299856448|gb|ADWV01000003.1| GENE 100 104956 - 105777 923 273 aa, chain + ## HITS:1 COG:dapB KEGG:ns NR:ns ## COG: dapB COG0289 # Protein_GI_number: 16128025 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Escherichia coli K12 # 1 273 1 273 273 470 99.0 1e-132 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGV TVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAAD IAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAH ALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSR MTFANGAVRSALWLSGKESGLFDMRDVLDLNSL >gi|299856448|gb|ADWV01000003.1| GENE 101 106338 - 107381 1069 347 aa, chain + ## HITS:1 COG:ECs0035 KEGG:ns NR:ns ## COG: ECs0035 COG0505 # Protein_GI_number: 15829289 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Escherichia coli O157:H7 # 1 347 36 382 382 716 100.0 0 MTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNT EDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNG MDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCR LTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLL ALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDG TLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK >gi|299856448|gb|ADWV01000003.1| GENE 102 107399 - 110620 4336 1073 aa, chain + ## HITS:1 COG:ECs0036 KEGG:ns NR:ns ## COG: ECs0036 COG0458 # Protein_GI_number: 15829290 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Escherichia coli O157:H7 # 1 1073 1 1073 1073 2123 99.0 0 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA DAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGG IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVG ITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDT AYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVP VIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVL GGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIME HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLI EVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKF PGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDL AAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGR RAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK >gi|299856448|gb|ADWV01000003.1| GENE 103 110628 - 110846 95 72 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0035 NR:ns ## KEGG: ECO103_0035 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 72 1 72 72 135 100.0 7e-31 MTRFEAIKQGHIKIVDISIVCNFTVDKCELNPAYVIKNIDSPKDLLNGQKKRSSSENRIT YSIKLADEKYPP >gi|299856448|gb|ADWV01000003.1| GENE 104 110881 - 111276 309 131 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0036 NR:ns ## KEGG: ECO103_0036 # Name: caiF # Def: DNA-binding transcriptional activator CaiF # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 131 1 131 131 249 100.0 2e-65 MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVAEISCEVK MIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQK WQMMLSKSMRR >gi|299856448|gb|ADWV01000003.1| GENE 105 111362 - 111952 429 196 aa, chain - ## HITS:1 COG:ECs0038 KEGG:ns NR:ns ## COG: ECs0038 COG0663 # Protein_GI_number: 15829292 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli O157:H7 # 1 196 8 203 203 389 98.0 1e-108 MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQD GCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSF VKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQME ENRPRLQGTTDVTPKR >gi|299856448|gb|ADWV01000003.1| GENE 106 111958 - 112851 1029 297 aa, chain - ## HITS:1 COG:caiD KEGG:ns NR:ns ## COG: caiD COG1024 # Protein_GI_number: 16128030 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 1 297 1 297 297 582 98.0 1e-166 MKQQGTTLPANNHAIKQYAFFAGMLSSLKKQKWRKGMSESLHLTRNGSILEITLDRPKAN AIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGF AGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVL RLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAI AALKEIFRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR >gi|299856448|gb|ADWV01000003.1| GENE 107 112852 - 114405 1232 517 aa, chain - ## HITS:1 COG:ECs0040 KEGG:ns NR:ns ## COG: ECs0040 COG0318 # Protein_GI_number: 15829294 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 1 517 6 522 522 1085 99.0 0 MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIR KGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFY PMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILF TSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAG ATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLS EQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRP LPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRR CNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEF FRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK >gi|299856448|gb|ADWV01000003.1| GENE 108 114479 - 115696 1449 405 aa, chain - ## HITS:1 COG:caiB KEGG:ns NR:ns ## COG: caiB COG1804 # Protein_GI_number: 16128032 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Escherichia coli K12 # 1 405 1 405 405 831 99.0 0 MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQ LSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVI AHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAA LAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYK CADGYIVMELVGITQIEECFKDIGLAHLLSTPEIPEGTQLIHRIECPYGPLVEEKLDAWL AAHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKF KNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED >gi|299856448|gb|ADWV01000003.1| GENE 109 115825 - 116967 1435 380 aa, chain - ## HITS:1 COG:ECs0042 KEGG:ns NR:ns ## COG: ECs0042 COG1960 # Protein_GI_number: 15829296 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli O157:H7 # 1 380 1 380 380 788 100.0 0 MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEH GGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMW NSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVY TEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHE RFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEA AWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVS GGSDEMQILTLGRAVLKQYR >gi|299856448|gb|ADWV01000003.1| GENE 110 116998 - 118512 1694 504 aa, chain - ## HITS:1 COG:caiT KEGG:ns NR:ns ## COG: caiT COG1292 # Protein_GI_number: 16128034 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli K12 # 1 504 1 504 504 934 99.0 0 MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMV VMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPP FGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVG EKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWI ILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRM LFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVMGLTASTW ILWTVLGSNTLLLMDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATV TLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGG CPLFFVNIMVTLSFIKDAKQNWKD >gi|299856448|gb|ADWV01000003.1| GENE 111 118986 - 119756 840 256 aa, chain + ## HITS:1 COG:ECs0044 KEGG:ns NR:ns ## COG: ECs0044 COG2086 # Protein_GI_number: 15829298 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Escherichia coli O157:H7 # 1 256 13 268 268 421 99.0 1e-118 MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTAL SVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGD GSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAV STDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAVDAWSEQQVAAPKQRERQRIVIEGD GEEQIAAFAENLRKVI >gi|299856448|gb|ADWV01000003.1| GENE 112 119771 - 120712 896 313 aa, chain + ## HITS:1 COG:fixB KEGG:ns NR:ns ## COG: fixB COG2025 # Protein_GI_number: 16128036 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Escherichia coli K12 # 1 313 1 313 313 601 99.0 1e-172 MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGVQAIQLGANHVWKLNGKPD DRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGK ATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRT ATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEH ERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDA VKILPALTAALAR >gi|299856448|gb|ADWV01000003.1| GENE 113 120763 - 122049 1323 428 aa, chain + ## HITS:1 COG:fixC KEGG:ns NR:ns ## COG: fixC COG0644 # Protein_GI_number: 16128037 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli K12 # 1 428 1 428 428 815 100.0 0 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIP GFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEE AGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTD VAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCG LHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIA GDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDM RMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKD GMKGVTVL >gi|299856448|gb|ADWV01000003.1| GENE 114 122046 - 122333 344 95 aa, chain + ## HITS:1 COG:ECs0047 KEGG:ns NR:ns ## COG: ECs0047 COG2440 # Protein_GI_number: 15829301 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Escherichia coli O157:H7 # 1 95 1 95 95 199 98.0 1e-51 MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQVLELLVKACPAGLYKKQDDGSVRFDY AGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG >gi|299856448|gb|ADWV01000003.1| GENE 115 122391 - 123722 1530 443 aa, chain + ## HITS:1 COG:yaaU KEGG:ns NR:ns ## COG: yaaU COG0477 # Protein_GI_number: 16128039 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 443 1 443 443 834 100.0 0 MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGA GTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVI GADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAA IPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRR HFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPM LWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPN ELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAF APETRGMSLAQTSNMTIRGQRMG >gi|299856448|gb|ADWV01000003.1| GENE 116 123887 - 124360 533 157 aa, chain + ## HITS:1 COG:yabF KEGG:ns NR:ns ## COG: yabF COG2249 # Protein_GI_number: 16128040 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli K12 # 1 157 20 176 176 313 100.0 1e-85 MLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWID KVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNW LPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAHHG >gi|299856448|gb|ADWV01000003.1| GENE 117 124353 - 124700 636 115 aa, chain + ## HITS:1 COG:kefC_1 KEGG:ns NR:ns ## COG: kefC_1 COG0475 # Protein_GI_number: 16128041 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, membrane components # Organism: Escherichia coli K12 # 1 115 1 115 398 191 99.0 2e-49 MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAE IGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLGLFCMLLGLRWQVA >gi|299856448|gb|ADWV01000003.1| GENE 118 124710 - 126215 2031 501 aa, chain + ## HITS:1 COG:kefC_1 KEGG:ns NR:ns ## COG: kefC_1 COG0475 # Protein_GI_number: 16128041 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, membrane components # Organism: Escherichia coli K12 # 1 279 120 398 398 494 100.0 1e-139 MTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAIPLVAMIPLLATSSASTTMG AFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGL SMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLLENPLRIVIL LLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQGSEFAFVVFGAAQMANVLEPEWAKS LTLAVALSMAATPILLVILNRLEQSSTEEAREADEIDEEQPRVIIAGFGRFGQITGRLLL SSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQ LTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYE ARERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQ GTEEGKHTGNMADEPETKPSS >gi|299856448|gb|ADWV01000003.1| GENE 119 126407 - 126886 675 159 aa, chain + ## HITS:1 COG:folA KEGG:ns NR:ns ## COG: folA COG0262 # Protein_GI_number: 16128042 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Escherichia coli K12 # 1 159 1 159 159 332 100.0 1e-91 MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNI ILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVE GDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR >gi|299856448|gb|ADWV01000003.1| GENE 120 126964 - 127806 787 280 aa, chain - ## HITS:1 COG:apaH KEGG:ns NR:ns ## COG: apaH COG0639 # Protein_GI_number: 16128043 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Escherichia coli K12 # 1 280 1 280 280 585 99.0 1e-167 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVR LVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAH AGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAF TRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGKGTPEGI YALDTGCCWGGSLTCLRWEDKQYFVQPSNRHKDLGEAAAS >gi|299856448|gb|ADWV01000003.1| GENE 121 127813 - 128190 306 125 aa, chain - ## HITS:1 COG:ECs0055 KEGG:ns NR:ns ## COG: ECs0055 COG2967 # Protein_GI_number: 15829309 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein affecting Mg2+/Co2+ transport # Organism: Escherichia coli O157:H7 # 1 125 1 125 125 241 100.0 2e-64 MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRET EVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAV PTLIH >gi|299856448|gb|ADWV01000003.1| GENE 122 128193 - 129014 738 273 aa, chain - ## HITS:1 COG:ksgA KEGG:ns NR:ns ## COG: ksgA COG0030 # Protein_GI_number: 16128045 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Escherichia coli K12 # 1 273 1 273 273 538 100.0 1e-153 MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLD QLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNIST PLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSA FTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTG MGIDPAMRAENISVAQYCQMANYLAENAPLQES >gi|299856448|gb|ADWV01000003.1| GENE 123 129011 - 130000 461 329 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 7 324 9 326 346 182 34 2e-44 MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTDRAAMLGLPLTLRTYS PNSPAQPQTAGTLTLLPVALRESVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGP VHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPAL LHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPLLDELRAQGMKL NGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTA LELAGRGEADVGSFITALNLAIKMIVNTQ >gi|299856448|gb|ADWV01000003.1| GENE 124 130000 - 131286 1445 428 aa, chain - ## HITS:1 COG:ECs0058 KEGG:ns NR:ns ## COG: ECs0058 COG0760 # Protein_GI_number: 15829312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 768 99.0 0 MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQL PDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAY DGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHIL IPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELP GIFAQALSAAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTD EQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATADIFDPAFRDALTRL NKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRAS AYVKILSN >gi|299856448|gb|ADWV01000003.1| GENE 125 131339 - 133693 2205 784 aa, chain - ## HITS:1 COG:imp KEGG:ns NR:ns ## COG: imp COG1452 # Protein_GI_number: 16128048 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Organic solvent tolerance protein OstA # Organism: Escherichia coli K12 # 1 784 1 784 784 1554 100.0 0 MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAK GDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILK GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTW SVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNY FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYED EHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFS VGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNT RDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNR VMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGL FRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWEND DKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYAS PEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQ YSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPY QNTL >gi|299856448|gb|ADWV01000003.1| GENE 126 133948 - 134763 814 271 aa, chain + ## HITS:1 COG:STM0094 KEGG:ns NR:ns ## COG: STM0094 COG1076 # Protein_GI_number: 16763484 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Salmonella typhimurium LT2 # 1 271 1 270 270 504 95.0 1e-142 MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFE VMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRS VCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQ FGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAK GLPPEMMEMAKQKAQEIQQAYELIKQQKGFK >gi|299856448|gb|ADWV01000003.1| GENE 127 134880 - 135539 218 219 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 16 218 83 281 285 88 31 3e-16 MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESV HRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWP NRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRF YASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF >gi|299856448|gb|ADWV01000003.1| GENE 128 135551 - 138457 3683 968 aa, chain - ## HITS:1 COG:ECs0063 KEGG:ns NR:ns ## COG: ECs0063 COG0553 # Protein_GI_number: 15829317 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Escherichia coli O157:H7 # 1 968 1 968 968 1915 100.0 0 MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL RLIVVTHQ >gi|299856448|gb|ADWV01000003.1| GENE 129 138622 - 140973 1851 783 aa, chain - ## HITS:1 COG:polB KEGG:ns NR:ns ## COG: polB COG0417 # Protein_GI_number: 16128054 # Func_class: L Replication, recombination and repair # Function: DNA polymerase elongation subunit (family B) # Organism: Escherichia coli K12 # 1 783 1 783 783 1628 99.0 0 MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGE QGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFI TSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYM LGPENGDASSLDFELEYVASRPLLLEKLNAWFANHDPDVIIGWNVVQFDLRMLQKHAERY RLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQEL LGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNG LPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDY KSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEA KRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYD VIYGDTDSTFVWLKGAHSEEEAAKIGRVLVQHVNAWWAETLQKQRLTSALELEYETHFCR FLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNE PYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPL QYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQL GLF >gi|299856448|gb|ADWV01000003.1| GENE 130 141048 - 141743 672 231 aa, chain - ## HITS:1 COG:araD KEGG:ns NR:ns ## COG: araD COG0235 # Protein_GI_number: 16128055 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 231 1 231 231 471 99.0 1e-133 MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVS IETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQSGQSIPAIGTTHAD YFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNA EDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ >gi|299856448|gb|ADWV01000003.1| GENE 131 141912 - 143414 1617 500 aa, chain - ## HITS:1 COG:araA KEGG:ns NR:ns ## COG: araA COG2160 # Protein_GI_number: 16128056 # Func_class: G Carbohydrate transport and metabolism # Function: L-arabinose isomerase # Organism: Escherichia coli K12 # 1 500 1 500 500 1058 99.0 0 MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEI TAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDF MNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCR FGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMT PATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQG YGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAV EEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLP KLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDT RLPAFKDALRWNEVYYGFRR >gi|299856448|gb|ADWV01000003.1| GENE 132 143425 - 145125 1657 566 aa, chain - ## HITS:1 COG:ECs0067 KEGG:ns NR:ns ## COG: ECs0067 COG1069 # Protein_GI_number: 15829321 # Func_class: C Energy production and conversion # Function: Ribulose kinase # Organism: Escherichia coli O157:H7 # 1 566 1 566 566 1097 98.0 0 MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIES MEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWK DHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIEL CDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFT DTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDI LIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLSWPLEQLAAQH PELKAQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLA TDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPL QIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPRSEQAQRFEQLYRRYQ QWAMSAEQHYLPTSAPAQAAQAVATL >gi|299856448|gb|ADWV01000003.1| GENE 133 145413 - 146342 695 309 aa, chain + ## HITS:1 COG:ECs0068 KEGG:ns NR:ns ## COG: ECs0068 COG2207 # Protein_GI_number: 15829322 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 18 309 1 292 292 619 99.0 1e-177 MQYGQLVSSLNGGSMKSMAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMK GYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAY WHEWLNWPSIFANTGFFRPDEARQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRR MEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISV LSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEK VNDVAVKLS >gi|299856448|gb|ADWV01000003.1| GENE 134 146428 - 147192 902 254 aa, chain + ## HITS:1 COG:ECs0069 KEGG:ns NR:ns ## COG: ECs0069 COG0586 # Protein_GI_number: 15829323 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 446 99.0 1e-125 MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAW LAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVG PTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWL LLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPL MPVYIDILRKVVGV >gi|299856448|gb|ADWV01000003.1| GENE 135 147294 - 147992 282 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 20 217 22 226 245 113 35 1e-23 MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDG VDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQEKMHAIARQMGID NLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQK MTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTNELLSGKASASALLGITG >gi|299856448|gb|ADWV01000003.1| GENE 136 147976 - 149586 1606 536 aa, chain - ## HITS:1 COG:thiP KEGG:ns NR:ns ## COG: thiP COG1178 # Protein_GI_number: 16128061 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Escherichia coli K12 # 1 536 1 536 536 888 98.0 0 MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWVAVWQDSYLWHVVRFSF WQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGW LASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRG WHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDP ARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALL LLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELR ARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYA LKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVV ALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD >gi|299856448|gb|ADWV01000003.1| GENE 137 149562 - 150545 1029 327 aa, chain - ## HITS:1 COG:tbpA KEGG:ns NR:ns ## COG: tbpA COG4143 # Protein_GI_number: 16128062 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type thiamine transport system, periplasmic component # Organism: Escherichia coli K12 # 13 327 13 327 327 617 99.0 1e-176 MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAFEADCNCELKLVALEDG VSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPF DYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAP QAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGH YLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEQLTKPA TTLEFTPAEVAAQRQAWISEWQRAVSR >gi|299856448|gb|ADWV01000003.1| GENE 138 150709 - 152364 1509 551 aa, chain - ## HITS:1 COG:ECs0074 KEGG:ns NR:ns ## COG: ECs0074 COG4533 # Protein_GI_number: 15829328 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 551 1 551 552 1110 99.0 0 MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVG RGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRH ILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHW RFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLP LLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNTTNQLKIQAFDDFFGYRALIDEVN VWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVL SPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAG IMQQILASHQVTLEIKEISYDQWHEGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQHC IPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFD FKSAWFAPPDP >gi|299856448|gb|ADWV01000003.1| GENE 139 152453 - 152584 157 43 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_0070 NR:ns ## KEGG: ECIAI1_0070 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 43 57 99 99 84 95.0 1e-15 MRQFYQHYFTATAKLCWLRWLSIPQRLTMLEGLMQWDDRNSES >gi|299856448|gb|ADWV01000003.1| GENE 140 152562 - 152813 56 83 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTAILKVDLPASCVTEYWCKITRQQIIPAGFFYSRRAKKGTYDLDNDDGSPYERCLRGIY AGRFYDGGGRGATGSYIELISES >gi|299856448|gb|ADWV01000003.1| GENE 141 152704 - 153864 869 386 aa, chain + ## HITS:1 COG:setA KEGG:ns NR:ns ## COG: setA COG0477 # Protein_GI_number: 16128064 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 386 7 392 392 656 99.0 0 MARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREVGAQPFWIGLFYTVNAIAGIGVS LWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRHYLTLITCGVLLASLANTAMPQLFA LAREYADNSAREVVMFSSVMRAQLSLAWVIGPPLAFMLALNYGFTVMFSIAAGIFTLSLV LIAFMLPSVARVELPSENALSMQGGWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSEL GLPDKLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFHSRMA LMTLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSW GHFAVYWVIAVISVVALFLTAKVKDV >gi|299856448|gb|ADWV01000003.1| GENE 142 153913 - 154518 874 201 aa, chain - ## HITS:1 COG:leuD KEGG:ns NR:ns ## COG: leuD COG0066 # Protein_GI_number: 16128065 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Escherichia coli K12 # 1 201 1 201 201 413 100.0 1e-115 MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPD FVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLL PVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTYRFTIDAFRRHCMMNGLDSIG LTLQHDDAIAAYEAKQPAFMN >gi|299856448|gb|ADWV01000003.1| GENE 143 154529 - 155929 1706 466 aa, chain - ## HITS:1 COG:leuC KEGG:ns NR:ns ## COG: leuC COG0065 # Protein_GI_number: 16128066 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Escherichia coli K12 # 1 466 1 466 466 927 100.0 0 MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGLRAHGRPVRQPGKTFAT MDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNHPYQGIVHVMGPEQGVTLP GMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQGRAKTMKIEVQGKAAPGITA KDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMTLCNMAIEMGAKAGLVAPDETTF NYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTVVTLQAEEISPQVTWGTNPGQVISV NDNIPDPASFADPVERASAEKALAYMGLKPGIPLTEVAIDKVFIGSCTNSRIEDLRAAAE IAKGRKVAPGVQALVVPGSGPVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNNDRLNP GERCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVTGHFADIRNIK >gi|299856448|gb|ADWV01000003.1| GENE 144 155932 - 157023 1260 363 aa, chain - ## HITS:1 COG:leuB KEGG:ns NR:ns ## COG: leuB COG0473 # Protein_GI_number: 16128067 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Escherichia coli K12 # 1 363 2 364 364 742 100.0 0 MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPA TVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAF CPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEKAFDTEVYHRFEIERIARIAF ESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQF DVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIA QILSLALLLRYSLDADDAACAIERAINRALEEGIRTGDLARGAAAVSTDEMGDIIARYVA EGV >gi|299856448|gb|ADWV01000003.1| GENE 145 157023 - 158594 1846 523 aa, chain - ## HITS:1 COG:ECs0078 KEGG:ns NR:ns ## COG: ECs0078 COG0119 # Protein_GI_number: 15829332 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Escherichia coli O157:H7 # 1 523 1 523 523 1013 99.0 0 MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVMEVGFPVSSPGDFESVQT IARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIATSPMHIATKLRSTLDEVIE RAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAINAGATTINIPDTVGYTMPFEF AGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAVHAGARQVEGAMNGIGERAGNCS LEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQICNMPIPANKAIVGSGAFAHSSGIH QDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGRAAVKHRMDEMGYKESEYNLDNLYDAF LKLADKKGQVFDYDLEALAFIGKQQEEPEHFRLDYFSVQSGSNDIATAAVKLACGEEVKA EAANGNGPVDAVYQAINRITDYNVELVKYSLTAKGHGKDALGQVDIVANYNGRRFHGVGL ATDIVESSAKAMVHVLNNIWRAAEVEKELQRKAQHNENNKETV >gi|299856448|gb|ADWV01000003.1| GENE 146 159415 - 160377 843 320 aa, chain + ## HITS:1 COG:leuO KEGG:ns NR:ns ## COG: leuO COG0583 # Protein_GI_number: 16128070 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 320 54 373 373 628 99.0 1e-180 MTVELSMPEVQTDHSETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVS NAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPGSGFEPASSERVF HLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQETEFVISYEDFHRP EFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDRFASFSQPWYDTVDKQA SIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVLPLPLKQNSRTCYLSWHEA AGRDKGHQWMEEQLVSICKR >gi|299856448|gb|ADWV01000003.1| GENE 147 160695 - 162419 1488 574 aa, chain + ## HITS:1 COG:ilvI KEGG:ns NR:ns ## COG: ilvI COG0028 # Protein_GI_number: 16132273 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli K12 # 1 574 1 574 574 1167 99.0 0 MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADG LARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQVATSLIGYDAFQECDMVG ISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVDLPKDILNPANKLPYVWPESV SMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAITAGCHQQLKETVEALNLPVVSS LMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATV LHIDIDPTSISKTVTADIPIVGDARQVLEQMLELLSQESAHQPLDEICDWWQQIEQWRAR QCLKYDTHSEKIKPQAVIETLWRLTKGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGL GTMGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNRYLGM VKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQVRNNRL VFVDVTVDGSEHVYPMQIRGGGMDEMWLSKTERT >gi|299856448|gb|ADWV01000003.1| GENE 148 162422 - 162913 497 163 aa, chain + ## HITS:1 COG:ECs0082 KEGG:ns NR:ns ## COG: ECs0082 COG0440 # Protein_GI_number: 15829336 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Escherichia coli O157:H7 # 1 163 1 163 163 281 99.0 3e-76 MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQI EKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLY TVQLAGTSDKLDAFLASIRDVAKIVEVARSGVVGLSRGDKIMR >gi|299856448|gb|ADWV01000003.1| GENE 149 163093 - 164097 1116 334 aa, chain + ## HITS:1 COG:ECs0084 KEGG:ns NR:ns ## COG: ECs0084 COG1609 # Protein_GI_number: 15829338 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 655 100.0 0 MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGR TRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDA IIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEMLAEELRKFPAE TVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYANSYEREAAAQLFEKWLETHPMPQ ALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDNELLDFLQCPVLAVAQRHRDVAERV LEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS >gi|299856448|gb|ADWV01000003.1| GENE 150 164699 - 165157 278 152 aa, chain + ## HITS:1 COG:ECs0085 KEGG:ns NR:ns ## COG: ECs0085 COG2001 # Protein_GI_number: 15829339 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 152 1 152 152 296 100.0 7e-81 MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPCLLLYPLPEWEIIEQKL SRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHAGLTKEVMLVGQFNKFELW DETTWHQQVKEDIDAEQLATGDLSERLQDLSL >gi|299856448|gb|ADWV01000003.1| GENE 151 165162 - 166100 1164 312 aa, chain + ## HITS:1 COG:ECs0086 KEGG:ns NR:ns ## COG: ECs0086 COG0275 # Protein_GI_number: 15829340 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Escherichia coli O157:H7 # 1 312 2 313 313 593 100.0 1e-169 MENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAI AVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRD GPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTK ELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISF HSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKLGGRQLRALGKLMPGEEEVAENPRAR SSVLRIAERTNA >gi|299856448|gb|ADWV01000003.1| GENE 152 166097 - 166462 339 121 aa, chain + ## HITS:1 COG:ECs0087 KEGG:ns NR:ns ## COG: ECs0087 COG3116 # Protein_GI_number: 15829341 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli O157:H7 # 1 121 1 121 121 224 100.0 4e-59 MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFICIILTAVTVVTTAHHT RLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIATEKLQMQHVDPSQENIVVQ K >gi|299856448|gb|ADWV01000003.1| GENE 153 166478 - 168244 1656 588 aa, chain + ## HITS:1 COG:ECs0088 KEGG:ns NR:ns ## COG: ECs0088 COG0768 # Protein_GI_number: 15829342 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 1162 100.0 0 MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAWLQVISPDMLVKEGDMR SLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAGGISVGDRWKALANALNIP LDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHLREESRRYYPSGEVTAHLIG FTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERL QALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPKEAMRNRTIT DVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPYRINGHEIKDVARYSELTLTGVLQKSS NVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLYPQKQRWSDIERATFSFGYG LMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGG GVKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKY YGGAVSAPVFGAIMGGVLRTMNIEPDALTTGDKNEFVINQGEGTGGRS >gi|299856448|gb|ADWV01000003.1| GENE 154 168231 - 169718 1538 495 aa, chain + ## HITS:1 COG:murE KEGG:ns NR:ns ## COG: murE COG0769 # Protein_GI_number: 16128078 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Escherichia coli K12 # 1 495 1 495 495 929 98.0 0 MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGV AAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGK TTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVEQGATFC AMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSEHHCGQAIIN ADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKAIDVNYHDSGATIRFSSSWGDGEIE SHLMGAFNVSNLLLALATLLALGYPLADLLKTAARLQPVCGRMEVFTALGKPTVVVDYAH TPDALEKALQAARLHCAGKLWCVFGCGGDRDKGKRPLMGAIAEEFADVAVVTDDNPRTEE PRAIINDILAGMLDAGHAKVMEGRAEAVTCAVMQAKENDVVLVAGKGHEDYQIVGNQRLD YSDRVTVARLLGVIA >gi|299856448|gb|ADWV01000003.1| GENE 155 169715 - 171073 1367 452 aa, chain + ## HITS:1 COG:murF KEGG:ns NR:ns ## COG: murF COG0770 # Protein_GI_number: 16128079 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Escherichia coli K12 # 1 452 1 452 452 814 99.0 0 MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALKGERFDAHDFADQAKAG GAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEMTAA ILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRPEAAL VNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMNADNNDWLNWQSVIGSRKVWRFS PNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLPLPGRHNIANALAAAALSMSVGATL DAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYNANVGSMTAAVQVLAEMPGYRVLVVGD MAELGAESEACHVQVGEAAKAAGIDRVLSVGKQSHAISTASGVGEHFADKTALITRLKSL IAEQQVITILVKGSRSAAMEEVVRALQENGTC >gi|299856448|gb|ADWV01000003.1| GENE 156 171067 - 172149 1357 360 aa, chain + ## HITS:1 COG:STM0125 KEGG:ns NR:ns ## COG: STM0125 COG0472 # Protein_GI_number: 16763515 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Salmonella typhimurium LT2 # 1 360 1 360 360 642 97.0 0 MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRMIAHLQKLSFGQVVRND GPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVLVVLVGYGVIGFVDDYRKV VRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQLVVPFFKDVMPQLGLFYILLA YFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWATGNMNFASYLHIPYLRHAGELV IVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGIIAVLLRQEFLLVIMGGVFVVE TLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR >gi|299856448|gb|ADWV01000003.1| GENE 157 172152 - 173468 1413 438 aa, chain + ## HITS:1 COG:murD KEGG:ns NR:ns ## COG: murD COG0771 # Protein_GI_number: 16128081 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Escherichia coli K12 # 1 438 1 438 438 844 99.0 0 MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLND EWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVT TLVGEMAKAAGVNVGVGGNIGLPALMLLDAECELYVLELSSFQLETTSSLQAVAATILNV TEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHL NHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFAGL PHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLQVDGTLHLLLGGDGKSADFSPLARYL NGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQF KNFEQRGNEFARLAKELG >gi|299856448|gb|ADWV01000003.1| GENE 158 173468 - 174712 1549 414 aa, chain + ## HITS:1 COG:ECs0093 KEGG:ns NR:ns ## COG: ECs0093 COG0772 # Protein_GI_number: 15829347 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Escherichia coli O157:H7 # 1 414 1 414 414 735 100.0 0 MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMYDRTLLWLTFGLAAIGF IMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRLPMEFWQRYSATMLLGSII LLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYIANYLVRKGDEVRNNLRGFLK PMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAKLWQFIAIIGMGISAVVLLILAE PYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGELWGQGLGNSVQKLEYLPEAHTDFIF AIIGEELGYVGVVLALLMVFFVAFRAMSIGRKALEIDHRFSGFLACSIGIWFSFQALVNV GAAAGMLPTKGLTLPLISYGGSSLLIMSTAIMMLLRIDYETRLEKAQAFVRGSR >gi|299856448|gb|ADWV01000003.1| GENE 159 174733 - 175776 972 347 aa, chain + ## HITS:1 COG:ECs0094 KEGG:ns NR:ns ## COG: ECs0094 COG0707 # Protein_GI_number: 15829348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Escherichia coli O157:H7 # 1 347 9 355 355 638 100.0 0 MVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGK GIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG IAGLTNKWLAKIATKVMQAFPGAFPNAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVV GGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMA AAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQ LSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRAARA >gi|299856448|gb|ADWV01000003.1| GENE 160 175830 - 177305 1635 491 aa, chain + ## HITS:1 COG:ECs0095 KEGG:ns NR:ns ## COG: ECs0095 COG0773 # Protein_GI_number: 15829349 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Escherichia coli O157:H7 # 1 491 1 491 491 907 100.0 0 MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQL MNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRH GIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDA SFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELL PRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAA VAVATEEGIDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVD ATIKAARAGWPDKNLVMLFQPHRFTRTRDLYDDFANVLTQVDTLLMLEVYPAGEAPIPGA DSRSLCRTIRGRGKIDPILVPDPAQVAEMLAPVLTGNDLILVQGAGNIGKIARSLAEIKL KPQTPEEEQHD >gi|299856448|gb|ADWV01000003.1| GENE 161 177298 - 178218 1070 306 aa, chain + ## HITS:1 COG:ddlB KEGG:ns NR:ns ## COG: ddlB COG1181 # Protein_GI_number: 16128085 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Escherichia coli K12 # 1 306 1 306 306 581 100.0 1e-166 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFI ALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRA EFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQHDEEVLIE KWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLSDETQYFCPAGLEASQEANLQAL VLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVR ILELAD >gi|299856448|gb|ADWV01000003.1| GENE 162 178220 - 179050 707 276 aa, chain + ## HITS:1 COG:ECs0097 KEGG:ns NR:ns ## COG: ECs0097 COG1589 # Protein_GI_number: 15829351 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Escherichia coli O157:H7 # 1 265 1 265 276 491 100.0 1e-139 MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWVVLGWMEDAQRLPLSKL VLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQRLPWIKQVSVRKQWPDELK IHLVEYVPIARWNDQHMVDAEGNTFSVPPDRTSKQVLPMLYGPEGSANEVLQGYREMGQM LAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMKRLARFVELYPVLQQQAQTDGKR ISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ >gi|299856448|gb|ADWV01000003.1| GENE 163 179047 - 180309 1115 420 aa, chain + ## HITS:1 COG:ECs0098 KEGG:ns NR:ns ## COG: ECs0098 COG0849 # Protein_GI_number: 15829352 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Escherichia coli O157:H7 # 1 420 1 420 420 818 100.0 0 MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSRGMDKGGVNDLESVVKC VQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEEEVTQEDVENVVHTAKSVR VRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHLITCHNDMAKNIVKAVERCGL KVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDIAVYTGGALRHTKVIPYAGNVVT SDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVEVPSVGGRPPRSLQRQTLAEVIEPR YTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFHTQVRIGA PLNITGLTDYAQEPYYSTAVGLLHYGKESHLNGEAEVEKRVTASVGSWIKRLNSWLRKEF >gi|299856448|gb|ADWV01000003.1| GENE 164 180370 - 181521 1348 383 aa, chain + ## HITS:1 COG:ECs0099 KEGG:ns NR:ns ## COG: ECs0099 COG0206 # Protein_GI_number: 15829353 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Escherichia coli O157:H7 # 1 383 1 383 383 642 100.0 0 MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNTDAQALRKTAVGQTIQI GSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAAGMGGGTGTGAAPVVAEVA KDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSLITIPNDKLLKVLGRGISLLD AFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMSEMGYAMMGSGVASGEDRAEEAA EMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFETVGNTIRAFASDNATVVIGTSLDP DMNDELRVTVVATGIGMDKRPEITLVTNKQVQQPVMDRYQQHGMAPLTQEQKPVAKVVND NAPQTAKEPDYLDIPAFLRKQAD >gi|299856448|gb|ADWV01000003.1| GENE 165 181622 - 182539 815 305 aa, chain + ## HITS:1 COG:ECs0100 KEGG:ns NR:ns ## COG: ECs0100 COG0774 # Protein_GI_number: 15829354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 636 100.0 0 MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIPIMDGSAAPFVYLLLDAGI DELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTIDFNHPAIDSSNQRYAMNFSAD AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFQDDAELPLAFKAP SAVLA >gi|299856448|gb|ADWV01000003.1| GENE 166 182695 - 183282 335 195 aa, chain + ## HITS:1 COG:no KEGG:G2583_0101 NR:ns ## KEGG: G2583_0101 # Name: secM # Def: secretion monitor protein # Organism: E.coli_O55_H7 # Pathway: Protein export [PATH:eok03060]; Bacterial secretion system [PATH:eok03070] # 1 195 33 227 227 384 98.0 1e-106 MLWTAGFNDKICALNTFEYDRDGNNVSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALS NAAEPNAPAKATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSF AMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVW ISQAQGIRAGPQRLT >gi|299856448|gb|ADWV01000003.1| GENE 167 183344 - 186049 3735 901 aa, chain + ## HITS:1 COG:secA KEGG:ns NR:ns ## COG: secA COG0653 # Protein_GI_number: 16128091 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Escherichia coli K12 # 1 901 1 901 901 1721 100.0 0 MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARLEKGEVL ENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNA LTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPGMPAPAKREAYAADITYGTNN EYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVN KIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYS PANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAK EGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIR KDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLN AKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLGGSWQAEVAALENPTAEQIEKIKAD WQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFAS DRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIY SQRNELLDVSDVSETINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPI AEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLA AMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEEL EQQRRMEAERLAQMQQLSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRL Q >gi|299856448|gb|ADWV01000003.1| GENE 168 186109 - 186498 337 129 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631237|ref|ZP_00156775.1| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes [Haemophilus influenzae R2866] # 2 126 4 128 136 134 48 4e-30 MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGI TPQHFSLFEKLEYEFPDRHITLWFWLVESWEGEPWGKEGQPGEWMSLVGLNADDFPPANE PVIAKLKRL >gi|299856448|gb|ADWV01000003.1| GENE 169 186598 - 186795 111 65 aa, chain - ## HITS:1 COG:ECs0105 KEGG:ns NR:ns ## COG: ECs0105 COG3024 # Protein_GI_number: 15829359 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 65 1 65 65 117 100.0 7e-27 MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEEKRIPSSGDLSESDDWS EEPKQ >gi|299856448|gb|ADWV01000003.1| GENE 170 186805 - 187548 784 247 aa, chain - ## HITS:1 COG:yacF KEGG:ns NR:ns ## COG: yacF COG4582 # Protein_GI_number: 16128095 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 247 1 247 247 484 100.0 1e-137 MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFFRNVSELLDVFERGEVR TELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIAL VRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIASLNPLTQALTMVLDLIRQSAP FRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDTENGQVPERL DFELACC >gi|299856448|gb|ADWV01000003.1| GENE 171 187548 - 188168 599 206 aa, chain - ## HITS:1 COG:ECs0107 KEGG:ns NR:ns ## COG: ECs0107 COG0237 # Protein_GI_number: 15829361 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 360 100.0 1e-100 MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGAPALHAIADHFGANMIA ADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQATSPYVLWVVPLLVENSL YKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQATREARLAVADDVIDNNGAPD AIASDVARLHAHYLQLASQFVSQEKP >gi|299856448|gb|ADWV01000003.1| GENE 172 188393 - 189436 1014 347 aa, chain + ## HITS:1 COG:guaC KEGG:ns NR:ns ## COG: guaC COG0516 # Protein_GI_number: 16128097 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Escherichia coli K12 # 1 347 1 347 347 697 100.0 0 MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSGQSWSGVPIIAANMDTVGTF SMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVSTGTSDADFEKTKQILDLN PALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVVTGEMCEELILSGADIVKVGI GPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTTPGDVAKAFGGGADFVM LGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMKRHVGGVAEYRAAEGKTVKLPLRGP VENTARDILGGLRSACTYVGASRLKELTKRTTFIRVQEQENRIFNNL >gi|299856448|gb|ADWV01000003.1| GENE 173 189471 - 190673 892 400 aa, chain - ## HITS:1 COG:ECs0110 KEGG:ns NR:ns ## COG: ECs0110 COG1459 # Protein_GI_number: 15829364 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 712 98.0 0 MASKQLWRWHGITGDGNAQDGMLWAESRALLLMALQQQMVTPLSLKRIAINSAQWRGDKS AEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAHDLEQGIAFSNALLPWSEV FPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTEKVKSALRYPIIILAMAIMVVVAM LHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWGWLLVLFGFLLAIANKLLMRRPTW LIARQKLLLRIPIMGSLMRGQKLTQIFTILALTQSAGITFLQGVESVRETMRCPYWVQLL TQIQHDISNGHPIWLALKNAGEFSPLCLQLVRTGEASGSLDLMLDNLAHHHRDNTMALAD NLAALLEPALLIITGGIIGTLVVAMYLPIFHLGDAMSGMG >gi|299856448|gb|ADWV01000003.1| GENE 174 190663 - 192048 802 461 aa, chain - ## HITS:1 COG:hofB KEGG:ns NR:ns ## COG: hofB COG2804 # Protein_GI_number: 16128100 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Escherichia coli K12 # 1 461 1 461 461 884 98.0 0 MNIPQLTALCLRYQGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQME GHASRTQQTLPVAVQEKHQPKAELLARTLQSALEQRASDIHIEPADNAYRIRLRIDGVLH PLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLPCRGGEKV VLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQTLN TADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAE IAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRR QQGEPIHIPVNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVES LETHARQAGMCTLFENGCLAVEQGLTTFEELIRVLGMPHGE >gi|299856448|gb|ADWV01000003.1| GENE 175 192058 - 192498 497 146 aa, chain - ## HITS:1 COG:ppdD KEGG:ns NR:ns ## COG: ppdD COG4969 # Protein_GI_number: 16128101 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Escherichia coli K12 # 1 146 1 146 146 292 99.0 2e-79 MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEH GGLDTCDGGSNGIPSPTTTHYVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGW TRNCNIQSDSALQQACEDVFRFDDAN >gi|299856448|gb|ADWV01000003.1| GENE 176 192701 - 193594 460 297 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 27 295 15 283 286 181 37 2e-44 MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANNDITAKLLPENSRSHATV ITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQSLFELEGPSRVLLTGERT ALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLRSALKYAVLCGGGANHRLGLS DAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVENLEELDEALKAGADIIMLDNFET EQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVDFISVGALTKHVQALDLSMRFR >gi|299856448|gb|ADWV01000003.1| GENE 177 193682 - 194233 522 183 aa, chain + ## HITS:1 COG:ampD KEGG:ns NR:ns ## COG: ampD COG3023 # Protein_GI_number: 16128103 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Escherichia coli K12 # 1 183 1 183 183 384 100.0 1e-107 MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT DTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSK ETT >gi|299856448|gb|ADWV01000003.1| GENE 178 194230 - 195084 868 284 aa, chain + ## HITS:1 COG:ampE KEGG:ns NR:ns ## COG: ampE COG3725 # Protein_GI_number: 16128104 # Func_class: V Defense mechanisms # Function: Membrane protein required for beta-lactamase induction # Organism: Escherichia coli K12 # 1 284 1 284 284 514 99.0 1e-146 MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTLGMTIIAMGVTFLLLRA LQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGELTMIHGVP AGCDEREYLRELQNALLWINFRFYLAALFWLIVGGTWGPVTLMGYAFLRAWQYWLARYQT PHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKALPAWFASLGDFHTSQYQVLTRLA QFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIALLTIYGALV >gi|299856448|gb|ADWV01000003.1| GENE 179 195127 - 196497 1465 456 aa, chain - ## HITS:1 COG:aroP KEGG:ns NR:ns ## COG: aroP COG1113 # Protein_GI_number: 16128105 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 1 456 2 457 457 823 99.0 0 MEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFL IMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFW YPEIPTWVSAAIFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGG PQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQV IYRILIFYIGSLAVLLSLMPWARVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYN SCVYCNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGL LMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALLYPLGNWICLLFMAAVLVIML MTPGMAISVYLIPVWLIVLGIGYLFKEKTAKAVKAH >gi|299856448|gb|ADWV01000003.1| GENE 180 197041 - 197805 740 254 aa, chain + ## HITS:1 COG:ECs0117 KEGG:ns NR:ns ## COG: ECs0117 COG2186 # Protein_GI_number: 15829371 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 402 100.0 1e-112 MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEA KGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLETRHALEGIAAYYAALRST DEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQN VRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAREASHRHLAFIEEILLDRSREES RRERSLRRLEQRKN >gi|299856448|gb|ADWV01000003.1| GENE 181 197966 - 200629 3489 887 aa, chain + ## HITS:1 COG:ECs0118 KEGG:ns NR:ns ## COG: ECs0118 COG2609 # Protein_GI_number: 15829372 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Escherichia coli O157:H7 # 1 887 1 887 887 1837 100.0 0 MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEARKGGVNVAAGTGISNY INTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDV CFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHGNGLSSYPH PKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESK GAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWD ELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWAL NRGGHDPKKIYAAFKKAQETKGKATVILAHTIKGYGMGDAAEGKNIAHQVKKMNMDGVRH IRDRFNVPVSDADIEKLPYITFPEGSEEHTYLHAQRQKLHGYLPSRQPNFTEKLELPSLQ DFGALLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYS PNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGCSWLAAATSYSTNNLPMIPFYIYY SMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYD PAYAYEVAVIMHDGLERMYGEKQENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETI EGSKGKVQLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHP LETPRVPYIAQVMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRH HFEVDASYVVVAALGELAKRGEIDKKVVADAIAKFNIDADKVNPRLA >gi|299856448|gb|ADWV01000003.1| GENE 182 200644 - 202536 2287 630 aa, chain + ## HITS:1 COG:ECs0119 KEGG:ns NR:ns ## COG: ECs0119 COG0508 # Protein_GI_number: 15829373 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Escherichia coli O157:H7 # 1 630 1 630 630 945 99.0 0 MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGIVKEIKVS VGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAAAAAKDVNVPDIGSDEVEV TEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEIKVNVGDKVSTGSLIMVFEVA GEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDEVEVTEVMVKVGDKVAAEQSLIT VEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEGAAPAAAPAKQEAAAPAPA AKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIRRLAREFGVNLAKVKGTGRKGRILRED VQAYVKEAIKRAEAAPAATGGGIPGMLPWPKVDFSKFGEIEEVELGRIQKISGANLSRNW VMIPHVTHFDKTDITELEAFRKQQNEEAAKRKLDVKITPVVFIMKAVAAALEQMPRFNSS LSEDGQRLTLKKYINIGVAVDTPNGLVVPVFKDVNKKGIIELSRELMTISKKARDGKLTA GEMQGGCFTISSIGGLGTTHFAPIVNAPEVAILGVSKSAMEPVWNGKEFVPRLMLPISLS FDHRVIDGADGARFITIINNTLSDIRRLVM >gi|299856448|gb|ADWV01000003.1| GENE 183 202861 - 204285 682 474 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 6 452 3 444 458 267 33 4e-70 MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVA KVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFT GANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLV MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTA VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQ LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV GLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGGE LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK >gi|299856448|gb|ADWV01000003.1| GENE 184 204356 - 206113 653 585 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0110 NR:ns ## KEGG: EC55989_0110 # Name: yacH # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 585 1 585 585 968 99.0 0 MKMTLPFKPHVLALICSAGLCAASTGLYIKSRTVEAPVEPQSTQQTAPDITAVTLPATVS APPVTPAVVKSAFSTAQIDQWVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQ GDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQRLRQ LAQQTGSLKSSTEQKVITTTKKAVPVTQTVTAPVIPSNTVSTASPIITEPATTVISIEPA NPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEPFIDSFVRGFGYSMGVATTYALFSS IDWDDDDHDHHHHDDDDYHHHDGGHRDGNGWQHNGDNINIDVNNFNRITGEHLTDKNMAW RHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSATQLPAPTRDSQRQAAASQFQQRTHAAPV ITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRE KMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQRPLNQQQRDNARQRVQSASPEQRQ VFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSERGARRQER >gi|299856448|gb|ADWV01000003.1| GENE 185 206468 - 209065 3177 865 aa, chain + ## HITS:1 COG:acnB KEGG:ns NR:ns ## COG: acnB COG1049 # Protein_GI_number: 16128111 # Func_class: C Energy production and conversion # Function: Aconitase B # Organism: Escherichia coli K12 # 1 865 1 865 865 1705 100.0 0 MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEFLLDLLTNRVPPGVDEA AYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPLIDALDDAKLAPIAAKALS HTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRPALAEKLTVTVFKVTGETNTD DLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVGPIKQIEALQQKGFPLAYVGDVV GTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGGKIAPIFFNTMEDAGALPIEVDVSN LNMGDVIDVYPYKGEVRNHETGELLATFELKTDVLIDEVRAGGRIPLIIGRGLTTKAREA LGLPHSDVFRQAKDVAESDRGFSLAQKMVGRACGVKGIRPGAYCEPKMTSVGSQDTTGPM TRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVNTHHTLPDFIMNRGGVSLRPGDGVIH SWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKM QPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEIEGLPDLKVEQAFELTDASA ERSAAGCTIKLNKEPIIEYLNSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEA DADAEYAAVIDIDLADIKEPILCAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAA GKLLDAHKGQLPTRLWVAPPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVA DGATVVSTSTRNFPNRLGTGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDT YRYLNFNQLSQYTEKADGVIFQTAV >gi|299856448|gb|ADWV01000003.1| GENE 186 209241 - 209603 477 120 aa, chain + ## HITS:1 COG:ECs0123 KEGG:ns NR:ns ## COG: ECs0123 COG3112 # Protein_GI_number: 15829377 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 120 17 136 136 217 100.0 3e-57 MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAAHALKGSERSWQRAG HEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK >gi|299856448|gb|ADWV01000003.1| GENE 187 209641 - 210435 825 264 aa, chain - ## HITS:1 COG:ECs0124 KEGG:ns NR:ns ## COG: ECs0124 COG1586 # Protein_GI_number: 15829378 # Func_class: E Amino acid transport and metabolism # Function: S-adenosylmethionine decarboxylase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 537 100.0 1e-153 MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIG ANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLPETVVAHLDKSHICVHTYP ESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDINGMKHF IDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTDSE RQEITAALWKEMREIYYGRNMPAV >gi|299856448|gb|ADWV01000003.1| GENE 188 210451 - 211317 838 288 aa, chain - ## HITS:1 COG:speE KEGG:ns NR:ns ## COG: speE COG0421 # Protein_GI_number: 16128114 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Escherichia coli K12 # 1 288 1 288 288 602 100.0 1e-172 MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDE FIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQY LPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKR CLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDND ALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQPS >gi|299856448|gb|ADWV01000003.1| GENE 189 211423 - 211770 358 115 aa, chain - ## HITS:1 COG:no KEGG:ECSE_0122 NR:ns ## KEGG: ECSE_0122 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 115 42 156 156 231 100.0 8e-60 MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALV FFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK >gi|299856448|gb|ADWV01000003.1| GENE 190 211936 - 213486 1585 516 aa, chain + ## HITS:1 COG:yacK KEGG:ns NR:ns ## COG: yacK COG2132 # Protein_GI_number: 16128116 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Escherichia coli K12 # 1 516 1 516 516 1043 99.0 0 MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDARNRIQLTIGAGQSTFG EKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEVDGGPQGIIL PGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEVLKLMLPKQWGIDD VPVIVQDKKFNADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCN ARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPV SQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLD MMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMNKP MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEGNVS EVLVKFNHNAPKEHAYMAHCHLLEHEDTGMMLGFTV >gi|299856448|gb|ADWV01000003.1| GENE 191 213533 - 215923 2598 796 aa, chain - ## HITS:1 COG:gcd KEGG:ns NR:ns ## COG: gcd COG4993 # Protein_GI_number: 16128117 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Escherichia coli K12 # 1 796 1 796 796 1523 99.0 0 MAINNTGSRRLLVTLTALFAALCGLYLLIGGGWLVAIGGSWYYPIAGLVMLGVAWMLWRS KRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGIWLILPFVWRRLVIPASGA VAALVVALLISGGILTWAGFNDPQEINGTLSANATPAEAISPVADQDWPAYGRNQEGQRF SPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEVTPIKVGDTLYLCTAHQRLFALD AASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAETASPEVMADCPRRIILPVNDGRLI AINAENGKLCETFANKGVLNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDNFSTRE TSGVIRGFDVNTGELLWAFDPGAKDPNAIPSDEHTFTFNSPNSWAPAAYDAKLDLVYLPM GVTTPDIWGGNRTPEQERYASSILALNATTGKLAWSYQTVHHDLWDMDLPAQPTLADITV NGQKVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVTPTQPFSELSFRPK KDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPN REVAIANPMALPFVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPF GLPCKQPAWGYISALDLKTNEVVWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAG NVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGT KMGDYIVAYALPDDVK >gi|299856448|gb|ADWV01000003.1| GENE 192 216129 - 216665 855 178 aa, chain + ## HITS:1 COG:ECs0129 KEGG:ns NR:ns ## COG: ECs0129 COG0634 # Protein_GI_number: 15829383 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 1 178 5 182 182 337 100.0 9e-93 MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSH EVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREP KSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDYAQRYRHLPYIGKVILLDE >gi|299856448|gb|ADWV01000003.1| GENE 193 216706 - 217368 650 220 aa, chain - ## HITS:1 COG:yadF KEGG:ns NR:ns ## COG: yadF COG0288 # Protein_GI_number: 16128119 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Escherichia coli K12 # 1 220 1 220 220 457 100.0 1e-129 MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGEL FVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGLINNWL LHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWA YGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHANHK >gi|299856448|gb|ADWV01000003.1| GENE 194 217477 - 218403 946 308 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 302 1 304 311 369 63 1e-100 MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSG RVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKY LKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLK DLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSETFILDLAPKS PLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLSEQGIQVLSMRNKANRLEELFVSLV NEKQGDRA >gi|299856448|gb|ADWV01000003.1| GENE 195 218400 - 219170 866 256 aa, chain + ## HITS:1 COG:ECs0132 KEGG:ns NR:ns ## COG: ECs0132 COG0842 # Protein_GI_number: 15829386 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 1 256 1 256 256 431 100.0 1e-121 MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQ FIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFV GILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTP LTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAF YLICWSLIQRGRGLRS >gi|299856448|gb|ADWV01000003.1| GENE 196 219275 - 219715 333 146 aa, chain + ## HITS:1 COG:yadI KEGG:ns NR:ns ## COG: yadI COG2893 # Protein_GI_number: 16128122 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli K12 # 1 146 1 146 146 301 99.0 3e-82 MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNMLSRMMCDALHEADSGEG VIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMACRETMTSSEFRERIVELG GPEVSSLWHQQQKNPPFVLKHNLYEY >gi|299856448|gb|ADWV01000003.1| GENE 197 219779 - 221008 903 409 aa, chain + ## HITS:1 COG:yadE KEGG:ns NR:ns ## COG: yadE COG0726 # Protein_GI_number: 16128123 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli K12 # 1 409 1 409 409 828 98.0 0 MYKQAVILLLMLFTASVSAALPARYMQTIENAAIWAQIGDKMVTVGNIRAGQIIAVEPTA ASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSAG SAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYISALDAQPDNGLPVLTYHHILR DEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD GLKSVSRYAYPVLKQYGMKATAFVVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQS HTHFLHRVDGYRRPILLSRSEHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAA NDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMSRLMSNQPQG >gi|299856448|gb|ADWV01000003.1| GENE 198 221012 - 221392 471 126 aa, chain - ## HITS:1 COG:ECs0135 KEGG:ns NR:ns ## COG: ECs0135 COG0853 # Protein_GI_number: 15829389 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Escherichia coli O157:H7 # 1 126 1 126 126 249 100.0 8e-67 MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAI AAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMKRTAKA IPVQVA >gi|299856448|gb|ADWV01000003.1| GENE 199 221342 - 221554 83 70 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_0134 NR:ns ## KEGG: EcE24377A_0134 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 7 70 1 64 64 103 98.0 2e-21 MSHFHAVEFALQHRANHNFYLSTLSLTKQAVPALRKFSRSIARFLMSVYSSDGICVSSLR TAPKRAMYRL >gi|299856448|gb|ADWV01000003.1| GENE 200 221666 - 222568 711 300 aa, chain + ## HITS:1 COG:yadD KEGG:ns NR:ns ## COG: yadD COG5464 # Protein_GI_number: 16128125 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 300 1 300 300 573 98.0 1e-163 MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEESLKGHS TDVLYSVQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAAMHRHLEADHDKLPLVVPIL FYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITITPDDEIMQHRRIAILELLQK HIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGES MMTLAQWFEEKGIEKGIQQGRQEERQEFALRLLSKGMSREDVAEMTNLSLAEIDKVINLI >gi|299856448|gb|ADWV01000003.1| GENE 201 222642 - 223493 1001 283 aa, chain - ## HITS:1 COG:panC KEGG:ns NR:ns ## COG: panC COG0414 # Protein_GI_number: 16128126 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Escherichia coli K12 # 1 283 1 283 283 547 99.0 1e-155 MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEAKARADVVVVSIFVNPM QFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNGTETHTYVDVPGLSTMLEG ASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIRKMVADMGFDIEIVGVPIMRA KDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAGERDLDEIITIAGQELNEKGFRA DDIQIRDAETLLEVSETSKRAVILVAAWLGDARLIDNKMVELA >gi|299856448|gb|ADWV01000003.1| GENE 202 223505 - 224299 894 264 aa, chain - ## HITS:1 COG:ECs0138 KEGG:ns NR:ns ## COG: ECs0138 COG0413 # Protein_GI_number: 15829392 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 511 97.0 1e-145 MKPTTIASLQKCKQDKKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPV TVEDIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMRAGANMVKIEGGEWLV ETVKMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVL ECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAETGDI RAAVRQYMAEVESGVYPGEEHSFH >gi|299856448|gb|ADWV01000003.1| GENE 203 224412 - 225362 169 316 aa, chain - ## HITS:1 COG:yadC KEGG:ns NR:ns ## COG: yadC COG3539 # Protein_GI_number: 16128128 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 3 316 101 412 412 389 69.0 1e-108 MRIENAMVDSGKMYGSHKLFNTSVPGLYYTLLISNMWSAYGTVTNVSSPGIYIGDSAEQY FSWYNPSEDVLYWSCNNANSTRKYWAVGGIYQTLTIEFYTDTNFDPTVTQQIKLSSSSNY LYSFKAYGAGQGINEHSYFIKIDFDLLNVKLTNPTCFTAMLSGTSVTGSTVKMGEYSAEQ IRNGATPVPFDISLQNCVRVTNIETKLVSTKVGTENGQLLGNTLTGNDAAKGVGVLIEGL ATSKNPLMTLKPNDSNSVYKDYDPRGKDDTTGGVYPDQDTGITYPLHFQATLQQDGTIPI EAGEFKATSTFQVTYP >gi|299856448|gb|ADWV01000003.1| GENE 204 225739 - 226335 226 198 aa, chain - ## HITS:1 COG:no KEGG:SSON_0145 NR:ns ## KEGG: SSON_0145 # Name: yadK # Def: putative fimbrial protein # Organism: S.sonnei # Pathway: not_defined # 1 198 1 198 198 390 100.0 1e-107 MHPTQRKLMKRIILFLSLQFPITYPAIAGQDIDLVANVKNSTCKSGISNQGNIDLGVVGV GYFSDNVTPESYQPGGKEFTVTVSDCALQGTGDVLNQLHIDFRALSGVMAAGSRQIFANE VATGAKNVGVVLFSIQDPTNIFNVISSAGNSRSVYPVMTSALHNSSWKFYARMQKIDPAL DVISGQVMSHILVDVYYE >gi|299856448|gb|ADWV01000003.1| GENE 205 226362 - 226964 374 200 aa, chain - ## HITS:1 COG:no KEGG:B21_00135 NR:ns ## KEGG: B21_00135 # Name: yadL # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 200 1 200 200 308 100.0 9e-83 MTFKNLRYGLSSSVVLAASLFSVPSYAATDSIGLTVITTVEIGTCTATLVNDSDQDISVV DFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKRATCEGTANDGAGFANGSTA ADKASAVAVEVWSTETPATGSATQFSCVTPASQEVTISNAANAVVYYPMSARLVVEKNKT VSNVTAGKFSAPATFTVTYN >gi|299856448|gb|ADWV01000003.1| GENE 206 226979 - 227362 192 127 aa, chain - ## HITS:1 COG:yadM KEGG:ns NR:ns ## COG: yadM COG3539 # Protein_GI_number: 16128131 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 127 77 203 203 233 100.0 7e-62 MGLDKIANKTTESQADFKLVASGCSSGISWIDTTLTGNASSSSPKLIIPQSGDSSSTTSN IGMGFKKRTTDDATFLKPNSAEKIRWSTDEMQPDKGLEMTVALRETDAGQGVPGNFRALA TFNFIYQ >gi|299856448|gb|ADWV01000003.1| GENE 207 227565 - 230165 1490 866 aa, chain - ## HITS:1 COG:htrE KEGG:ns NR:ns ## COG: htrE COG3188 # Protein_GI_number: 16128132 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 866 1 865 865 1635 97.0 0 MTIKPTKNYHNHLTRIATFCALLYCNSAFCAELVEYDHTFLMGQNASNIDLSRYSEGNPA IPGMYDVSVYVNDQPIINQSITFIEIEGKKNAQACITLKNLLQFHINSPDINNEKAVLLA RDETLGNCLNLTEIIPQASVRYDVNEQRLDIDVPQAWVMKNYQNYVDPSLWENGINAAML SYNLNGYHSETPGRRNDSIYAAFNGGMNLGAWRLRASGNYNWMTDSGSNYDFKNRYIQRD IASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRMLPPTLASFAPIIHGVANTNAKVTI TQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIVTVEESDGSKRTFSQPFSSVVQMLRPGV GRWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTGYTGIQITDNNYTAGLLGLGLNTSV GAFSFDVTHSNVRIPDDKTYQGQSYRVSWNKLFEETSTSLNIAAYRYSTQNYLGLNDALT LIDEVKHPEQDLEPKSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQN RSNYSIGYSNSASWGSYSVSAQRSWNEDGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSID TQMSSDFKGNNQLNVSSSGYSDNARLSYSVNTGYTMNKASKDLSYVGGYASYESPWGTLA GSVSANSDNSRQVSLSTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNST IDRWGYGVTSALSPYHENRIALDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSA IMNITRSDGKNIPFAADIYDEQGNVIGNVGQGGQAFVRGIEQQGNISIKWLEESKPVSCL AHYQQSSEAEKIAQSIILNGIRCQIQ >gi|299856448|gb|ADWV01000003.1| GENE 208 230200 - 230892 475 230 aa, chain - ## HITS:1 COG:ecpD KEGG:ns NR:ns ## COG: ecpD COG3121 # Protein_GI_number: 16128133 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 230 17 246 246 444 98.0 1e-125 MAFSSSSIADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVP FTATPPVSRIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQL AFRTRIKLFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASG KRYPIDVKMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAIEGNASL >gi|299856448|gb|ADWV01000003.1| GENE 209 231045 - 231629 493 194 aa, chain - ## HITS:1 COG:yadN KEGG:ns NR:ns ## COG: yadN COG3539 # Protein_GI_number: 16128134 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 194 1 194 194 326 100.0 2e-89 MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETRVDGGNKDGLILLQTAT VGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMTFGSVFFGNSKGTLNNDMSIN NPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKSAVYDFKASYVRAVADQTATA GYVKTNTAYTITYQ >gi|299856448|gb|ADWV01000003.1| GENE 210 231999 - 232478 203 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 4 139 122 255 278 82 38 1e-14 MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILAVSSFYRTPPLGPQDQPDYLNAAVA LETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMK NRGFMLWPLFEIAPELAFPDGETLREVLHTRAFDKLSKW >gi|299856448|gb|ADWV01000003.1| GENE 211 232475 - 233839 1405 454 aa, chain - ## HITS:1 COG:ECs0147 KEGG:ns NR:ns ## COG: ECs0147 COG0617 # Protein_GI_number: 15829401 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Escherichia coli O157:H7 # 1 454 1 454 454 862 100.0 0 MLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRD LLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNV SDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGV IRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESL KLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMR VNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTR DIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAP PDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA >gi|299856448|gb|ADWV01000003.1| GENE 212 233932 - 234828 500 298 aa, chain - ## HITS:1 COG:yadB KEGG:ns NR:ns ## COG: yadB COG0008 # Protein_GI_number: 16128137 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 298 11 308 308 607 99.0 1e-174 MTDTQYIGRFAPSPSGELHFGSLIAALGSYLQARARQGRWLVRIEDIDPPREVPGAAETI LRQLEHYGLHWDGDVLWQSQRHHAYREALAWLHEQGLSYYCTCTRARIQSIGGIYDGHCR VLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLAREDFIIHRRDGLFAYNLAVVVDD HFQGVTEIVRGADLIEPTVRQISLYQLFGWKVPDYIHLPLALNPQGAKLSKQNHAPALPK GDPRPVLIAALQFLGQQAEAHWQDFSVEQILQSAVKNWRLTAVPESAIVNSTFSNASC >gi|299856448|gb|ADWV01000003.1| GENE 213 234895 - 235350 659 151 aa, chain - ## HITS:1 COG:ECs0149 KEGG:ns NR:ns ## COG: ECs0149 COG1734 # Protein_GI_number: 15829403 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Escherichia coli O157:H7 # 1 151 1 151 151 261 100.0 5e-70 MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE IGIRRLEARPTADLCIDCKTLAEIREKQMAG >gi|299856448|gb|ADWV01000003.1| GENE 214 235528 - 236232 379 234 aa, chain - ## HITS:1 COG:ECs0150 KEGG:ns NR:ns ## COG: ECs0150 COG1489 # Protein_GI_number: 15829404 # Func_class: R General function prediction only # Function: DNA-binding protein, stimulates sugar fermentation # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 467 100.0 1e-132 MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTK RKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRI DFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAV LHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL >gi|299856448|gb|ADWV01000003.1| GENE 215 236247 - 236777 498 176 aa, chain - ## HITS:1 COG:ligT KEGG:ns NR:ns ## COG: ligT COG1514 # Protein_GI_number: 16128140 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 2'-5' RNA ligase # Organism: Escherichia coli K12 # 1 176 4 179 179 334 99.0 5e-92 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR PFHPHITLLRDAREAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ >gi|299856448|gb|ADWV01000003.1| GENE 216 236806 - 239280 2088 824 aa, chain + ## HITS:1 COG:hrpB KEGG:ns NR:ns ## COG: hrpB COG1643 # Protein_GI_number: 16128141 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Escherichia coli K12 # 1 824 1 824 824 1483 99.0 0 MLQCGAKNVNPLERFVSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHP GINGKIILLEPRRLAARNVAQRLVELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLT RMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQ QMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEI QRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIR LVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGICLHLIAKEQAERAA AQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPTVNLLAAKRLLQMLGALEGERLS AQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMGNSDLGVAFSRNQPAW QQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIARRRGQDGRYQLANGMGAMLDANDA LSRHEWLIAPLLLQGSASPDARILLALLVDIDELVQRCPQLVQQSDTVEWDDAQGTLKAW RRLQIGQLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVLNWTAEAEQLRLRLLCAAKWLP EYDWPAVDDESLLAALETWLLPHMTGVHSLRGLKSLDIYQALRGLLDWGMQQRLDSELPA HYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATNPTIAQGRVPLVLELLSPAQRPLQIT RDLSAFWKGAYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS >gi|299856448|gb|ADWV01000003.1| GENE 217 239476 - 242010 2944 844 aa, chain + ## HITS:1 COG:ECs0153 KEGG:ns NR:ns ## COG: ECs0153 COG0744 # Protein_GI_number: 15829407 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Escherichia coli O157:H7 # 1 844 1 844 844 1521 99.0 0 MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEEPMPRKGKGKGKGRKPR SKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMTIS KNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHL ATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEH DGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDAR YSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIY NPWRNPKLALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQPRGGVISPQPAFMQLVRQ ELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQRKLSDLETAIVVVDRF SGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIAL RQPNGQVWSPQNDDRRYSESGRVMLVDALTRSMNVPTVNLGMALGLPAITDTWIKLGVPK DQLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAER AVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTI TWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGM RVLPVWTSDPQSLCQQSEMQQQPSGNPFDQSSQPQQQPQQQPAQQEQKDSDGVAGWIKDM FGSN >gi|299856448|gb|ADWV01000003.1| GENE 218 242230 - 244473 2541 747 aa, chain + ## HITS:1 COG:ECs0154 KEGG:ns NR:ns ## COG: ECs0154 COG1629 # Protein_GI_number: 15829408 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 # 1 747 1 747 747 1461 99.0 0 MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAAT IAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTY DHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLERAEIMRGPVSVLYGKSSPGG LLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQQKG SEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFN EGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPANAYSK QCAALAPADKGHYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDI NAWFGYDDSVPLLNLYNPVNTDFDFNAKDPANSGPYRILNKQKQTGVYVQDQAQWDKVLV TLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVG KDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRA RGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPL SGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDRE YVASCFNTYGCFWGAERQVVATATFRF >gi|299856448|gb|ADWV01000003.1| GENE 219 244524 - 245321 229 265 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 9 235 274 507 563 92 29 1e-17 MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRH QPPTEGEILLDTQPLESWSSKAFARKVAYLPQQLPPAEGLTVRELVAIGRYPWHGALGRF GAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDI AHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMRGET LEMIYGIPMGILPHPAGAAPVSFVY >gi|299856448|gb|ADWV01000003.1| GENE 220 245321 - 246211 858 296 aa, chain + ## HITS:1 COG:fhuD KEGG:ns NR:ns ## COG: fhuD COG0614 # Protein_GI_number: 16128145 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 296 1 296 296 582 99.0 1e-166 MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWLPVELLLALGIVPYGVA DTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVWSAGYGPSPEMLARIAPGR GFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAHYEDFIRSMKPRFVKRGERPLLLT TLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWGSTAVSIDRLAAYKDVDVLCFDH DNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYGATLSAMHFVRVLDNAIGGKA >gi|299856448|gb|ADWV01000003.1| GENE 221 246208 - 248190 1892 660 aa, chain + ## HITS:1 COG:fhuB KEGG:ns NR:ns ## COG: fhuB COG0609 # Protein_GI_number: 16128146 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli K12 # 1 660 1 660 660 965 99.0 0 MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSPDINVIEQMIFHYSLLP RLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLGITVTTLWAIPGAMASQFA ALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAINQLLVIFHHDQLQSMFLWST GTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLDDGVARNLGLALSLARLAALSLA IVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPRLMLASLIGALILWLSDQIILWLTR VWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDMKVNDRVATERQHVLAFALAGGVLLLM AVVVALSFGRDAHGWTWASGALLEDLMPWRWPRIMAALFAGVMLAVAGCIIQRLTGNPMA SPEVLGISSGAAFGVVLMLFLVPGNAFGWLLPAGSLGAAVTLLIIMIAAGRGGFSPHRML LAGMALSTAFTMLLMMLQASGDPRMAQVLTWISGSTYNATDAQVWRTGIVMVILLAITPL CRRWLTILPLGGDTARAVGMALTPTRIALLLLAACLTATATMTIGPLSFVGLMAPHIARM MGFRRTMPHIVISALVGGLLLVFADWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR >gi|299856448|gb|ADWV01000003.1| GENE 222 248225 - 249505 1497 426 aa, chain - ## HITS:1 COG:ECs0158 KEGG:ns NR:ns ## COG: ECs0158 COG0001 # Protein_GI_number: 15829412 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Escherichia coli O157:H7 # 1 426 1 426 426 845 99.0 0 MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWG PMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATM SAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKHTLTCT YNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPEFLPGLRALCDEFGALLIIDEVM TGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSG NPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLLEAAKEAGIPLVVNHVGGMFGIFFT DAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPSAFEAGFMSVAHSMEDINNTIDAAR RVFAKL >gi|299856448|gb|ADWV01000003.1| GENE 223 249730 - 251151 1541 473 aa, chain + ## HITS:1 COG:yadQ KEGG:ns NR:ns ## COG: yadQ COG0038 # Protein_GI_number: 16128148 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Escherichia coli K12 # 1 473 1 473 473 789 100.0 0 MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGTLVGLAAVAFDKGVAWL QNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQR PVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLLAT GAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALID VGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGG LCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPM LALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQ LILPMIITGLGATLLAQFTGGKPLYSAILARTLAKQEAEQLARSKAASASENT >gi|299856448|gb|ADWV01000003.1| GENE 224 251233 - 251577 496 114 aa, chain + ## HITS:1 COG:STM0204 KEGG:ns NR:ns ## COG: STM0204 COG0316 # Protein_GI_number: 16763594 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 114 16 129 129 221 99.0 4e-58 MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQVNEGDM TIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI >gi|299856448|gb|ADWV01000003.1| GENE 225 251624 - 252169 607 181 aa, chain - ## HITS:1 COG:yadS KEGG:ns NR:ns ## COG: yadS COG2860 # Protein_GI_number: 16128150 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 181 27 207 207 296 100.0 1e-80 MDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLP KWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILR TEIYATACIIGGIVHATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENG R >gi|299856448|gb|ADWV01000003.1| GENE 226 252285 - 253085 775 266 aa, chain - ## HITS:1 COG:yadT KEGG:ns NR:ns ## COG: yadT COG0614 # Protein_GI_number: 16128151 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 266 1 266 266 482 100.0 1e-136 MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKI EQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALR QLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVL EVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLT SDWFERASPRIILAAQQLCNALSQVD >gi|299856448|gb|ADWV01000003.1| GENE 227 253078 - 253776 714 232 aa, chain - ## HITS:1 COG:STM0207 KEGG:ns NR:ns ## COG: STM0207 COG0775 # Protein_GI_number: 16763597 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Salmonella typhimurium LT2 # 1 232 1 232 232 412 96.0 1e-115 MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGAT LLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFK ADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAH VCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLAHG >gi|299856448|gb|ADWV01000003.1| GENE 228 253860 - 255377 1091 505 aa, chain + ## HITS:1 COG:dgt KEGG:ns NR:ns ## COG: dgt COG0232 # Protein_GI_number: 16128153 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Escherichia coli K12 # 1 505 1 505 505 1011 99.0 0 MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERN AAVRTRLTHSMEVQQVGRYIAKEILSRLKELKLLEAYGLDELTGPFESIVEMSCLMHDIG NPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAALRLRDGEEPLNELRRKIRQDL CHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWWRGETPETHHYLMKKPGYYLSEE AYIARLRKELNLALYSRFPLTWIMEAADDISYCVADLEDAVEKRIFTVEQLYHHLHEAWG QHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFMYLRVNTLNKLVPYAAQRFIDNLPAIF AGTFNHALLEDASECSDLLKLYKNVAVKHVFSHPDVEQLELQGYRVISGLLEIYRPLLSL SLSDFTELVEKERVKRFPIESRLFHKLSTRHRLAYVEAVSKLPSDSPEFPLWEYYYRCRL LQDYISGMTDLYAWDEYRRLMAVEQ >gi|299856448|gb|ADWV01000003.1| GENE 229 255507 - 256931 1530 474 aa, chain + ## HITS:1 COG:ECs0165 KEGG:ns NR:ns ## COG: ECs0165 COG0265 # Protein_GI_number: 15829419 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Escherichia coli O157:H7 # 1 474 1 474 474 780 100.0 0 MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPMLEKVMPSVVSINVEGS TTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVIID ADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMAD SDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGAL VNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNS ELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVG SKLTLGLLRDGKQVNVNLELQQSSQNQVDSSSIFNGIEGAEMSNKGKDQGVVVNNVKTGT PAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ >gi|299856448|gb|ADWV01000003.1| GENE 230 257086 - 258243 1187 385 aa, chain + ## HITS:1 COG:yaeG KEGG:ns NR:ns ## COG: yaeG COG3835 # Protein_GI_number: 16128155 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Sugar diacid utilization regulator # Organism: Escherichia coli K12 # 1 385 7 391 391 733 99.0 0 MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERIGELHEGALLVLSQGRV VDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLRKYGELVCMTAEMMLEQSR LMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDS AMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKE YGQLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVLLDSLRG DWQANELARPLARLKAMDNNGLLRRTLAAWFRHNVQPLATSKALFIHRNTLEYRLNRISE LTGLDLGNFDDRLLLYVALQLDEER >gi|299856448|gb|ADWV01000003.1| GENE 231 258332 - 258718 451 128 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0162 NR:ns ## KEGG: ECIAI1_0162 # Name: yaeH # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 128 1 128 128 218 100.0 6e-56 MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAKSVKFKYPRQRKTVVAD GVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILDDLRHLESVVTNKISEIEA DLEKLTRK >gi|299856448|gb|ADWV01000003.1| GENE 232 259033 - 259857 1096 274 aa, chain - ## HITS:1 COG:dapD KEGG:ns NR:ns ## COG: dapD COG2171 # Protein_GI_number: 16128159 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Escherichia coli K12 # 1 274 1 274 274 521 100.0 1e-148 MQQLQNIIETAFERRAEITPANADTVTREAVNQVIALLDSGALRVAEKIDGQWVTHQWLK KAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEGFRVVPPAAVRQGAFIARN TVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIED NCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRETGEIHYGRVPAGSVVVSGNLPS KDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID >gi|299856448|gb|ADWV01000003.1| GENE 233 259888 - 262560 2414 890 aa, chain - ## HITS:1 COG:glnD KEGG:ns NR:ns ## COG: glnD COG2844 # Protein_GI_number: 16128160 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Escherichia coli K12 # 1 890 1 890 890 1785 99.0 0 MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQRWLGDAFDNGISAEQL IEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHPLSDIDLLILSRKKLPDDQ AQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVATNLIESRLLIGDVALFLELQK HIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPDIKSSPGGLRDIHTLQWVARRHF GATSLDEMVGFGFLTSAERAELNECLHILWRIRFALHLVVSRYDNRLLFDRQLSVAQRLN YSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLFDEAILALPADEKPRPIDDEFQLRGTL IDLRDETLFMRQPEAILRMFYTMVRNSAITGIYSTTLRQLRHARRHLQQPLCNIPEARKL FLSILRHPGAVRRGLLPMHRHSVLGAYMPQWSHIVGQMQFDLFHAYTVDEHTIRVMLKLE SFASEETRQRHPLCVDVWPRLPSTELIFIAALFHDIAKGRGGDHSILGAQDVVHFAELHG LNSRETQLVAWLVRQHLLMSVTAQRRDIQDPEVIKQFAEEVQTENRLRYLVCLTVADICA TNETLWNSWKQSLLRELYFATEKQLRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEAL HQIWSRCRANYFVRHSPNQLAWHARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYL FAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSADRHEVIRFGLEQVLTQ SSWQPPQPRRQPAKLRHFTVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGI SLHGARITTIGERVEDLFIIATADRRALNNELQQEVHQRLTEALNPNDKG >gi|299856448|gb|ADWV01000003.1| GENE 234 262622 - 263416 890 264 aa, chain - ## HITS:1 COG:ECs0170 KEGG:ns NR:ns ## COG: ECs0170 COG0024 # Protein_GI_number: 15829424 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 537 100.0 1e-153 MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACL GYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTI MGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEE PQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVV TDNGCEILTLRKDDTIPAIISHDE >gi|299856448|gb|ADWV01000003.1| GENE 235 263586 - 264509 1594 307 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|26106512|gb|AAN78698.1|AE016755_198 30S ribosomal protein S2 [Escherichia coli CFT073] # 1 307 1 307 307 618 99 1e-176 MVSMTYLWYKARRTSDPFRIHRLDGSDNLTLCNNTHVSAHIPGCPLGSVIWDTWRHNPNF YIEVLIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEAL AELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRL KDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIK EANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAE ESFVEAE >gi|299856448|gb|ADWV01000003.1| GENE 236 264767 - 265618 1001 283 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 280 1 279 283 390 71 1e-107 MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADG VIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEVLKAQFEEERV ALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKGADEELVKHIAMHVAASKPEF IKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVSLTGQPFVMEPSK TVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEVAAMSKQS >gi|299856448|gb|ADWV01000003.1| GENE 237 265765 - 266490 1050 241 aa, chain + ## HITS:1 COG:ECs0173 KEGG:ns NR:ns ## COG: ECs0173 COG0528 # Protein_GI_number: 15829427 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Escherichia coli O157:H7 # 1 241 1 241 241 460 100.0 1e-130 MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNL FRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDSYSWA EAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPAKDPT ATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLIT E >gi|299856448|gb|ADWV01000003.1| GENE 238 266782 - 267339 837 185 aa, chain + ## HITS:1 COG:ECs0174 KEGG:ns NR:ns ## COG: ECs0174 COG0233 # Protein_GI_number: 15829428 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Escherichia coli O157:H7 # 1 185 1 185 185 296 100.0 1e-80 MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVE DSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGE AEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEA ELMQF >gi|299856448|gb|ADWV01000003.1| GENE 239 267431 - 268627 924 398 aa, chain + ## HITS:1 COG:dxr KEGG:ns NR:ns ## COG: dxr COG0743 # Protein_GI_number: 16128166 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Escherichia coli K12 # 1 398 1 398 398 759 100.0 0 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEA SAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTI LLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVS ILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFN ASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFC KLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALN LSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS >gi|299856448|gb|ADWV01000003.1| GENE 240 268816 - 269574 398 252 aa, chain + ## HITS:1 COG:ECs0176 KEGG:ns NR:ns ## COG: ECs0176 COG0020 # Protein_GI_number: 15829430 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Escherichia coli O157:H7 # 1 252 2 253 253 509 100.0 1e-144 MLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNG IEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQ ERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHV CMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRER RFGGTEPGDETA >gi|299856448|gb|ADWV01000003.1| GENE 241 269695 - 270444 613 249 aa, chain + ## HITS:1 COG:ECs0177 KEGG:ns NR:ns ## COG: ECs0177 COG0575 # Protein_GI_number: 15829431 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Escherichia coli O157:H7 # 1 249 1 249 249 418 100.0 1e-117 MLAAWEWGQLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWW IVALLLVLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLY VMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLDVA PVTLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC LLLLVFRTL >gi|299856448|gb|ADWV01000003.1| GENE 242 270456 - 271808 954 450 aa, chain + ## HITS:1 COG:ECs0178 KEGG:ns NR:ns ## COG: ECs0178 COG0750 # Protein_GI_number: 15829432 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 872 100.0 0 MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGFGKALWRRTDKLGTEYV IALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIAAGPVANFIFAIFAYWLVF IIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTI TVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPRGPQIEPVLENVQPNSAASKAGL QAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPESKPGNGKAIG FVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKTWQLMKLTVSMLGKLITGDVKLNNLSG PISIAKGAGMTAELGVVYYLPFLALISVNLGIINLFPLPVLDGGHLLFLAIEKIKGGPVS ERVQDFCYRIGSILLVLLMGLALFNDFSRL >gi|299856448|gb|ADWV01000003.1| GENE 243 271838 - 274270 2452 810 aa, chain + ## HITS:1 COG:ECs0179 KEGG:ns NR:ns ## COG: ECs0179 COG4775 # Protein_GI_number: 15829433 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Escherichia coli O157:H7 # 1 810 1 810 810 1609 100.0 0 MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDIS NTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVR VGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQI NIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNI DSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTK VTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTS KDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKE RNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTV DGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQ PQVAMWRYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVT IPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTV RGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFIT PTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPL GPLVFSYAQPFKKYDGDKAEQFQFNIGKTW >gi|299856448|gb|ADWV01000003.1| GENE 244 274392 - 274877 612 161 aa, chain + ## HITS:1 COG:STM0225 KEGG:ns NR:ns ## COG: STM0225 COG2825 # Protein_GI_number: 16763615 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 1 161 1 161 161 209 90.0 2e-54 MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSNTLENEFKGRASELQRM ETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFEQDRARRSNEERGKLVTRI QTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQVK >gi|299856448|gb|ADWV01000003.1| GENE 245 274881 - 275906 917 341 aa, chain + ## HITS:1 COG:lpxD KEGG:ns NR:ns ## COG: lpxD COG1044 # Protein_GI_number: 16128172 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Escherichia coli K12 # 1 341 1 341 341 650 100.0 0 MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVNPKYREHLGLCQASAVV MTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGA NAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVGA DGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHN VVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGMVMRPITEPGV YSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLERKVNQQD >gi|299856448|gb|ADWV01000003.1| GENE 246 276011 - 276466 492 151 aa, chain + ## HITS:1 COG:ZfabZ KEGG:ns NR:ns ## COG: ZfabZ COG0764 # Protein_GI_number: 15799862 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Escherichia coli O157:H7 EDL933 # 1 151 1 151 151 295 100.0 2e-80 MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPI FPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKT RRGLTRFKGVALVDGKVVCEATMMCARSREA >gi|299856448|gb|ADWV01000003.1| GENE 247 276470 - 277258 806 262 aa, chain + ## HITS:1 COG:lpxA KEGG:ns NR:ns ## COG: lpxA COG1043 # Protein_GI_number: 16128174 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Escherichia coli K12 # 1 262 1 262 262 511 100.0 1e-145 MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDN EIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMIN AHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQD VPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNAYKLIYRSGKTLDEVKPEIAELA ETYPEVKAFTDFFARSTRGLIR >gi|299856448|gb|ADWV01000003.1| GENE 248 277258 - 278406 1107 382 aa, chain + ## HITS:1 COG:lpxB KEGG:ns NR:ns ## COG: lpxB COG0763 # Protein_GI_number: 16128175 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Escherichia coli K12 # 1 382 1 382 382 747 99.0 0 MTKQRPLTIALVAGETSGDILGAGLIRALKEHVPNARFVGVAGPRMQAEGCEAWYEMEEL AVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDFNITLEGNLKKQGIKTIHY VSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVPCRFIGHTMADAMPLDPDKNA ARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQLLRQTYPDLEIVVPLVNAKRREQ FERIKAEVAPDLSVHLLDGMGREAMVASDAALLASGTAALECMLAKCPMVVGYRMKPFTF WLAKRLVKTDYVSLPNLLAGRELVKELLQEECEPQKLAAALLPLLANGKTSHAMHDTFRE LHQQIRCNADEQAAQAVLELAQ >gi|299856448|gb|ADWV01000003.1| GENE 249 278403 - 278999 737 198 aa, chain + ## HITS:1 COG:rnhB KEGG:ns NR:ns ## COG: rnhB COG0164 # Protein_GI_number: 16128176 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Escherichia coli K12 # 1 198 1 198 198 372 100.0 1e-103 MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEE IKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAM AVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGAT EHHRRSFGPVKRALGLAS >gi|299856448|gb|ADWV01000003.1| GENE 250 279036 - 282518 3586 1160 aa, chain + ## HITS:1 COG:ECs0186 KEGG:ns NR:ns ## COG: ECs0186 COG0587 # Protein_GI_number: 15829440 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Escherichia coli O157:H7 # 1 1160 1 1160 1160 2374 99.0 0 MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA GIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIDRDW LIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEES YLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM RSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAKEGL EERLAFLFPDEEERVKRRPEYDERLETELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDML QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM AKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG VGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLD DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD RLLNDLRGLIGSEQVELEFD >gi|299856448|gb|ADWV01000003.1| GENE 251 282531 - 283490 1397 319 aa, chain + ## HITS:1 COG:ECs0187 KEGG:ns NR:ns ## COG: ECs0187 COG0825 # Protein_GI_number: 15829441 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Escherichia coli O157:H7 # 1 319 1 319 319 619 100.0 1e-177 MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGA WQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQK GRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEA IARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKS ADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDVL STEDLKNRRYQRLMSYGYA >gi|299856448|gb|ADWV01000003.1| GENE 252 283589 - 285730 2011 713 aa, chain + ## HITS:1 COG:ldcC KEGG:ns NR:ns ## COG: ldcC COG1982 # Protein_GI_number: 16128179 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli K12 # 1 713 1 713 713 1511 100.0 0 MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQY TDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADV SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLI DRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVH AVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIF ETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNP GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDAD ADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIG IDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKH DLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLM PGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG >gi|299856448|gb|ADWV01000003.1| GENE 253 285787 - 286176 414 129 aa, chain + ## HITS:1 COG:ECs0189 KEGG:ns NR:ns ## COG: ECs0189 COG0346 # Protein_GI_number: 15829443 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Escherichia coli O157:H7 # 1 129 10 138 138 271 100.0 3e-73 MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFS FPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPD GLPLELYEQ >gi|299856448|gb|ADWV01000003.1| GENE 254 286241 - 287539 1117 432 aa, chain + ## HITS:1 COG:mesJ KEGG:ns NR:ns ## COG: mesJ COG0037 # Protein_GI_number: 16128181 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Escherichia coli K12 # 1 432 1 432 432 778 96.0 0 MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTLRAIHVHHGLSANADAW VTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQ CETFLLALKRGSGPAGLSAMGEVSEFAGTRLIRPLLARTRGELAQWALAHGLRWIEDESN QDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAEQESLLDELLADDLAHCQTSQGT LQIAPMLAMSDARRAAIIRRWLAGQNAPMPSRDALVRIWQEVALAREDASPCLRFGAFEI RRYQSQLWWINSVTGQSETIVPWQTWLQPLELPAGLGSVQLTAGGDIRPPRADEAVSVRF KAPGLLHIVGRNGGRKLKKIWQELGVPPWLRDTTPLLFYGETLIAAAGVFVTQEGVAEGE NGVSFVWQKTLS >gi|299856448|gb|ADWV01000003.1| GENE 255 287588 - 287842 315 84 aa, chain - ## HITS:1 COG:ECs0191 KEGG:ns NR:ns ## COG: ECs0191 COG4568 # Protein_GI_number: 15829445 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli O157:H7 # 1 84 3 86 86 155 100.0 1e-38 MNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASDLVSRKNVEYLVVEAAGET RELRLDKITSFSHPEIGTVVVSES >gi|299856448|gb|ADWV01000003.1| GENE 256 287835 - 288035 174 66 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_0458 NR:ns ## KEGG: ECIAI39_0458 # Name: yaeP # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 66 1 66 66 107 100.0 1e-22 MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALSEAVREKAAYAAANLLV SDYVNE >gi|299856448|gb|ADWV01000003.1| GENE 257 288201 - 288746 781 181 aa, chain + ## HITS:1 COG:yaeQ KEGG:ns NR:ns ## COG: yaeQ COG4681 # Protein_GI_number: 16128183 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 181 1 181 181 330 99.0 7e-91 MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRG LCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVVLFTYNSRAAQIWWQQNQ SKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTAWQQP S >gi|299856448|gb|ADWV01000003.1| GENE 258 288743 - 289165 285 140 aa, chain + ## HITS:1 COG:yaeJ KEGG:ns NR:ns ## COG: yaeJ COG1186 # Protein_GI_number: 16128184 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Escherichia coli K12 # 1 140 1 140 140 208 97.0 2e-54 MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAAS HHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKARRPTRPTRASKERRLA SKAQKSSVKAMRGKVRSGRE >gi|299856448|gb|ADWV01000003.1| GENE 259 289179 - 289889 681 236 aa, chain + ## HITS:1 COG:ECs0194 KEGG:ns NR:ns ## COG: ECs0194 COG3015 # Protein_GI_number: 15829448 # Func_class: M Cell wall/membrane/envelope biogenesis; P Inorganic ion transport and metabolism # Function: Uncharacterized lipoprotein NlpE involved in copper resistance # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 464 98.0 1e-131 MVKKAIVTAMAVISLFTLMGCNNRAEVDALSPAQAAELKPMPQSWRGVLPCADCEGIETS LFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEML DREGNPIESQFNYTLEPAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELE RSYLAARGHSEKPVLLSVEGHFTLEANPDTGAPTKVLAPDTAGKFYPNKDCSSLGQ Prediction of potential genes in microbial genomes Time: Sun May 15 15:07:57 2011 Seq name: gi|299856447|gb|ADWV01000004.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont3.1, whole genome shotgun sequence Length of sequence - 224502 bp Number of predicted genes - 216, with homology - 216 Number of transcription units - 122, operones - 50 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 332 - 371 0.1 2 2 Op 1 17/0.000 - CDS 425 - 1396 1003 ## COG0500 SAM-dependent methyltransferases 3 2 Op 2 2/0.800 - CDS 1393 - 2136 826 ## COG0500 SAM-dependent methyltransferases 4 2 Op 3 2/0.800 - CDS 2177 - 2572 475 ## COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily 5 2 Op 4 1/0.960 - CDS 2625 - 3443 508 ## COG1801 Uncharacterized conserved protein 6 2 Op 5 . - CDS 3440 - 4006 513 ## COG1335 Amidases related to nicotinamidase - Prom 4033 - 4092 6.5 + Prom 4162 - 4221 4.6 7 3 Op 1 5/0.240 + CDS 4316 - 6088 2247 ## COG0173 Aspartyl-tRNA synthetase 8 3 Op 2 7/0.040 + CDS 6149 - 6658 355 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 9 3 Op 3 8/0.000 + CDS 6687 - 7427 1041 ## COG0217 Uncharacterized conserved protein 10 3 Op 4 . + CDS 7462 - 7983 544 ## COG0817 Holliday junction resolvasome, endonuclease subunit + Term 7991 - 8028 5.2 - Term 7808 - 7849 2.3 11 4 Tu 1 . - CDS 7985 - 8587 252 ## SSON_1279 hypothetical protein - Prom 8619 - 8678 5.0 + Prom 8613 - 8672 8.3 12 5 Op 1 29/0.000 + CDS 8861 - 9472 637 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 13 5 Op 2 . + CDS 9481 - 10491 1177 ## COG2255 Holliday junction resolvasome, helicase subunit + Term 10510 - 10558 3.7 14 6 Op 1 42/0.000 - CDS 10638 - 11423 921 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 15 6 Op 2 . - CDS 11420 - 12175 219 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 12247 - 12306 6.5 + Prom 12159 - 12218 6.1 16 7 Op 1 . + CDS 12239 - 13186 471 ## COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin 17 7 Op 2 1/0.960 + CDS 13202 - 14524 1268 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 14541 - 14575 3.5 + Prom 14550 - 14609 6.4 18 8 Tu 1 . + CDS 14644 - 15615 837 ## COG1560 Lauroyl/myristoyl acyltransferase + Term 15706 - 15758 10.7 - Term 15605 - 15643 5.3 19 9 Tu 1 . - CDS 15747 - 17189 1442 ## COG0469 Pyruvate kinase - Prom 17237 - 17296 2.0 - Term 17258 - 17298 1.4 20 10 Tu 1 . - CDS 17317 - 18186 709 ## COG1737 Transcriptional regulators + Prom 18292 - 18351 7.8 21 11 Tu 1 . + CDS 18524 - 19999 1693 ## COG0364 Glucose-6-phosphate 1-dehydrogenase + Term 20079 - 20116 5.1 + Prom 20067 - 20126 6.6 22 12 Op 1 8/0.000 + CDS 20234 - 22045 1707 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 23 12 Op 2 . + CDS 22082 - 22723 911 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase + Term 22734 - 22764 4.3 - Term 22716 - 22759 9.1 24 13 Tu 1 . - CDS 22779 - 23957 1252 ## COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) - Prom 24050 - 24109 4.7 + Prom 24005 - 24064 5.0 25 14 Op 1 . + CDS 24091 - 24381 346 ## COG3141 Uncharacterized protein conserved in bacteria 26 14 Op 2 . + CDS 24448 - 24804 196 ## ECIAI39_1203 hypothetical protein 27 15 Tu 1 . - CDS 24718 - 24924 97 ## gi|188494878|ref|ZP_03002148.1| hypothetical protein Ec53638_0054 - Prom 24988 - 25047 3.2 + Prom 24915 - 24974 2.8 28 16 Tu 1 . + CDS 25131 - 25790 843 ## COG2979 Uncharacterized protein conserved in bacteria + Prom 25861 - 25920 1.8 29 17 Tu 1 . + CDS 25999 - 28059 1889 ## COG1770 Protease II 30 18 Op 1 4/0.460 - CDS 28056 - 28718 766 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 31 18 Op 2 . - CDS 28742 - 29398 411 ## COG0388 Predicted amidohydrolase - Prom 29438 - 29497 3.7 32 19 Tu 1 . - CDS 29500 - 29730 330 ## ECP_1786 DNA polymerase III subunit theta (EC:2.7.7.7) - Prom 29752 - 29811 2.1 + Prom 29781 - 29840 4.0 33 20 Op 1 8/0.000 + CDS 29869 - 30243 357 ## COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC 34 20 Op 2 . + CDS 30247 - 31119 739 ## COG1276 Putative copper export protein 35 20 Op 3 . + CDS 31132 - 31473 368 ## ECO111_2347 hypothetical protein + Term 31502 - 31559 4.4 36 21 Tu 1 . + CDS 31869 - 32525 578 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 37 22 Op 1 . - CDS 32526 - 32801 189 ## SSON_1324 hypothetical protein 38 22 Op 2 . - CDS 32822 - 33058 242 ## ECSP_2410 hypothetical protein - Prom 33112 - 33171 4.4 39 23 Tu 1 4/0.460 - CDS 33176 - 34615 1172 ## COG0144 tRNA and rRNA cytosine-C5-methylases - Term 34651 - 34686 7.2 40 24 Op 1 11/0.000 - CDS 34695 - 37334 2453 ## COG3008 Paraquat-inducible protein B 41 24 Op 2 . - CDS 37297 - 38475 754 ## COG2995 Uncharacterized paraquat-inducible protein A - Prom 38655 - 38714 4.8 + Prom 38584 - 38643 3.6 42 25 Op 1 4/0.460 + CDS 38710 - 39207 303 ## PROTEIN SUPPORTED gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 + Term 39234 - 39268 3.1 43 25 Op 2 7/0.040 + CDS 39304 - 40002 588 ## COG3109 Activator of osmoprotectant transporter ProP 44 25 Op 3 5/0.240 + CDS 40022 - 42070 2020 ## COG0793 Periplasmic protease + Term 42077 - 42112 6.0 + Prom 42099 - 42158 4.4 45 26 Tu 1 . + CDS 42262 - 43143 943 ## COG0501 Zn-dependent protease with chaperone function + Term 43164 - 43195 2.4 - Term 43152 - 43183 2.4 46 27 Tu 1 . - CDS 43189 - 44562 901 ## COG0477 Permeases of the major facilitator superfamily - Prom 44682 - 44741 8.3 + Prom 44641 - 44700 6.3 47 28 Tu 1 . + CDS 44739 - 45530 870 ## COG1414 Transcriptional regulator + Term 45540 - 45584 3.1 - Term 45528 - 45570 2.3 48 29 Tu 1 . - CDS 45673 - 45912 232 ## ECO103_2017 hypothetical protein - Prom 45936 - 45995 5.2 + Prom 46210 - 46269 6.0 49 30 Tu 1 . + CDS 46289 - 46576 259 ## ECS88_1877 hypothetical protein + Term 46590 - 46633 6.1 + Prom 47270 - 47329 2.6 50 31 Tu 1 . + CDS 47401 - 47610 333 ## COG1278 Cold shock proteins + Term 47659 - 47689 1.0 + Prom 47618 - 47677 3.7 51 32 Tu 1 . + CDS 47860 - 48585 611 ## COG0500 SAM-dependent methyltransferases + Term 48834 - 48872 4.4 - Term 48505 - 48546 2.1 52 33 Tu 1 . - CDS 48582 - 49148 626 ## COG1971 Predicted membrane protein - Term 49343 - 49383 0.8 53 34 Tu 1 4/0.460 - CDS 49577 - 50035 314 ## COG4811 Predicted membrane protein - Term 50044 - 50073 3.5 54 35 Op 1 13/0.000 - CDS 50090 - 50941 1098 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 55 35 Op 2 13/0.000 - CDS 50954 - 51754 1059 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 56 35 Op 3 . - CDS 51817 - 52788 1241 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 52922 - 52981 4.5 57 36 Op 1 . + CDS 53250 - 53570 199 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance 58 36 Op 2 . + CDS 53452 - 54807 1498 ## COG1253 Hemolysins and related proteins containing CBS domains 59 37 Tu 1 . - CDS 54811 - 56409 1184 ## COG2200 FOG: EAL domain - Prom 56466 - 56525 1.9 - Term 56492 - 56529 8.2 60 38 Tu 1 . - CDS 56540 - 57904 1559 ## COG1760 L-serine deaminase - Prom 57997 - 58056 5.2 61 39 Op 1 6/0.100 - CDS 58088 - 58666 398 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 62 39 Op 2 . - CDS 58670 - 60031 986 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 60079 - 60138 5.2 + Prom 60023 - 60082 4.7 63 40 Tu 1 . + CDS 60105 - 60284 328 ## COG3140 Uncharacterized protein conserved in bacteria - Term 60331 - 60374 5.2 64 41 Tu 1 . - CDS 60463 - 60702 179 ## ECIAI39_1242 hypothetical protein 65 42 Tu 1 . - CDS 61125 - 61469 477 ## COG0251 Putative translation initiation inhibitor, yjgF family 66 43 Op 1 8/0.000 + CDS 61601 - 63511 1672 ## COG1199 Rad3-related DNA helicases 67 43 Op 2 7/0.040 + CDS 63569 - 64264 746 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 68 43 Op 3 7/0.040 + CDS 64304 - 64885 606 ## COG3065 Starvation-inducible outer membrane lipoprotein + Term 64911 - 64939 0.6 + Prom 64945 - 65004 3.1 69 44 Op 1 8/0.000 + CDS 65024 - 66775 1560 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 66794 - 66826 3.0 70 44 Op 2 . + CDS 66857 - 67972 1087 ## COG0349 Ribonuclease D - Term 67965 - 68021 13.2 71 45 Op 1 11/0.000 - CDS 68026 - 68991 552 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Term 69001 - 69043 5.5 72 45 Op 2 3/0.720 - CDS 69047 - 70171 1244 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 73 45 Op 3 3/0.720 - CDS 70203 - 71813 1660 ## COG1292 Choline-glycine betaine transporter - Prom 71909 - 71968 8.1 - Term 72011 - 72045 6.0 74 46 Tu 1 . - CDS 72064 - 73149 988 ## COG0473 Isocitrate/isopropylmalate dehydrogenase - Prom 73184 - 73243 3.0 + Prom 73152 - 73211 3.8 75 47 Tu 1 . + CDS 73252 - 74175 862 ## COG0583 Transcriptional regulator + Prom 74202 - 74261 3.5 76 48 Tu 1 . + CDS 74302 - 74940 569 ## COG1280 Putative threonine efflux protein + Prom 74962 - 75021 3.8 77 49 Op 1 . + CDS 75113 - 75472 383 ## COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance 78 49 Op 2 . + CDS 75476 - 75664 268 ## ECO103_1985 hypothetical protein + Prom 76059 - 76118 5.3 79 50 Tu 1 . + CDS 76179 - 77327 293 ## COG0675 Transposase and inactivated derivatives - Term 77298 - 77328 1.6 80 51 Tu 1 . - CDS 77367 - 78542 894 ## COG3135 Uncharacterized protein involved in benzoate metabolism 81 52 Op 1 3/0.720 + CDS 78634 - 79173 339 ## COG1396 Predicted transcriptional regulators + Term 79204 - 79234 1.1 82 52 Op 2 . + CDS 79246 - 81207 1690 ## COG0826 Collagenase and related proteases 83 53 Tu 1 . - CDS 81299 - 81529 220 ## SSON_1702 hypothetical protein - Prom 81669 - 81728 2.8 84 54 Op 1 2/0.800 + CDS 81952 - 82389 405 ## COG1598 Uncharacterized conserved protein 85 54 Op 2 3/0.720 + CDS 82468 - 83874 1093 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Prom 83918 - 83977 3.4 86 55 Op 1 13/0.000 + CDS 84119 - 85264 1273 ## COG0687 Spermidine/putrescine-binding periplasmic protein 87 55 Op 2 30/0.000 + CDS 85282 - 86295 897 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 88 55 Op 3 36/0.000 + CDS 86296 - 87237 964 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 89 55 Op 4 5/0.240 + CDS 87227 - 88021 752 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 90 55 Op 5 1/0.960 + CDS 88043 - 89467 1302 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 89477 - 89515 5.7 + Prom 89756 - 89815 5.3 91 56 Tu 1 . + CDS 89998 - 90486 142 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Term 90604 - 90650 -0.9 + Prom 90967 - 91026 3.1 92 57 Op 1 . + CDS 91130 - 91351 135 ## ECIAI1_1442 conserved hypothetical protein; putative inner membrane protein + Prom 91358 - 91417 1.7 93 57 Op 2 . + CDS 91437 - 91670 379 ## G2583_1807 hypothetical protein 94 58 Op 1 4/0.460 - CDS 91671 - 92120 399 ## COG3238 Uncharacterized protein conserved in bacteria 95 58 Op 2 . - CDS 92117 - 92635 537 ## COG1247 Sortase and related acyltransferases - Prom 92669 - 92728 2.3 + Prom 92602 - 92661 2.7 96 59 Tu 1 . + CDS 92819 - 93856 1018 ## COG2130 Putative NADP-dependent oxidoreductases + Term 93961 - 93995 -0.4 + Prom 93867 - 93926 6.3 97 60 Tu 1 . + CDS 94054 - 94719 629 ## COG1802 Transcriptional regulators + Term 94802 - 94839 0.3 - Term 94709 - 94748 5.1 98 61 Tu 1 . - CDS 94755 - 96857 1711 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 96886 - 96945 3.8 + Prom 96845 - 96904 4.8 99 62 Tu 1 . + CDS 97099 - 98160 1284 ## COG3391 Uncharacterized conserved protein + Term 98244 - 98278 6.8 - Term 98232 - 98266 6.8 100 63 Tu 1 . - CDS 98275 - 99774 1548 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 99887 - 99946 3.7 + Prom 99945 - 100004 4.4 101 64 Op 1 . + CDS 100041 - 100658 494 ## COG0625 Glutathione S-transferase 102 64 Op 2 . + CDS 100734 - 100946 109 ## ECO103_1586 hypothetical protein 103 65 Op 1 . + CDS 101847 - 104204 1349 ## COG3209 Rhs family protein 104 65 Op 2 . + CDS 104219 - 104665 264 ## EC55989_1590 conserved hypothetical protein; putative exported protein 105 66 Tu 1 . + CDS 105328 - 105687 274 ## COG5433 Transposase + Term 105727 - 105761 -0.9 + Prom 105754 - 105813 4.0 106 67 Op 1 5/0.240 + CDS 105835 - 106344 374 ## COG3272 Uncharacterized conserved protein 107 67 Op 2 . + CDS 106341 - 107759 913 ## COG0415 Deoxyribodipyrimidine photolyase - Term 107741 - 107785 10.8 108 68 Tu 1 . - CDS 107801 - 109282 1805 ## COG3104 Dipeptide/tripeptide permease - Prom 109395 - 109454 3.0 + Prom 109376 - 109435 3.0 109 69 Op 1 4/0.460 + CDS 109553 - 110296 813 ## COG0327 Uncharacterized conserved protein 110 69 Op 2 21/0.000 + CDS 110319 - 110975 656 ## COG2049 Allophanate hydrolase subunit 1 111 69 Op 3 8/0.000 + CDS 110969 - 111901 956 ## COG1984 Allophanate hydrolase subunit 2 112 69 Op 4 3/0.720 + CDS 111891 - 112625 699 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 113 69 Op 5 . + CDS 112661 - 113452 588 ## COG0266 Formamidopyrimidine-DNA glycosylase - Term 113216 - 113261 1.7 114 70 Tu 1 . - CDS 113449 - 114495 954 ## COG3180 Putative ammonia monooxygenase - Prom 114554 - 114613 5.2 - Term 114599 - 114638 5.2 115 71 Op 1 . - CDS 114647 - 115708 802 ## SSON_0667 hypothetical protein 116 71 Op 2 10/0.000 - CDS 115705 - 116436 606 ## COG3121 P pilus assembly protein, chaperone PapD 117 71 Op 3 6/0.100 - CDS 116451 - 118910 1463 ## COG3188 P pilus assembly protein, porin PapC - Term 118921 - 118950 3.5 118 71 Op 4 3/0.720 - CDS 118961 - 119527 569 ## COG3539 P pilus assembly protein, pilin FimA - Term 119852 - 119891 8.4 119 72 Tu 1 . - CDS 119918 - 121201 1437 ## COG0372 Citrate synthase - Prom 121234 - 121293 2.8 + Prom 120911 - 120970 2.9 120 73 Tu 1 . + CDS 121189 - 121374 71 ## ECSE_0779 hypothetical protein 121 74 Tu 1 . - CDS 121407 - 121514 64 ## EC55989_0704 hypothetical protein - Prom 121630 - 121689 4.7 + Prom 121629 - 121688 5.5 122 75 Op 1 24/0.000 + CDS 121895 - 122299 289 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 123 75 Op 2 22/0.000 + CDS 122293 - 122640 531 ## COG2142 Succinate dehydrogenase, hydrophobic anchor subunit 124 75 Op 3 36/0.000 + CDS 122640 - 124406 2242 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 125 75 Op 4 5/0.240 + CDS 124422 - 125138 686 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit + Term 125146 - 125191 -0.9 + Prom 125244 - 125303 1.9 126 76 Op 1 21/0.000 + CDS 125339 - 128140 2805 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes 127 76 Op 2 6/0.100 + CDS 128155 - 129372 1713 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 128 76 Op 3 39/0.000 + CDS 129466 - 130632 1470 ## COG0045 Succinyl-CoA synthetase, beta subunit 129 76 Op 4 . + CDS 130632 - 131501 1075 ## COG0074 Succinyl-CoA synthetase, alpha subunit + Term 131577 - 131606 2.1 - Term 131494 - 131543 1.2 130 77 Tu 1 . - CDS 131605 - 132327 736 ## COG2188 Transcriptional regulators - Prom 132378 - 132437 6.8 + Prom 132393 - 132452 4.5 131 78 Op 1 2/0.800 + CDS 132496 - 134412 1927 ## COG1299 Phosphotransferase system, fructose-specific IIC component 132 78 Op 2 . + CDS 134430 - 137063 1752 ## COG0383 Alpha-mannosidase 133 78 Op 3 . + CDS 137088 - 137315 98 ## SSON_0684 hypothetical protein + Prom 137723 - 137782 7.7 134 79 Op 1 31/0.000 + CDS 137910 - 139478 1871 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 135 79 Op 2 3/0.720 + CDS 139494 - 140633 1490 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 136 79 Op 3 2/0.800 + CDS 140648 - 140761 148 ## COG4890 Predicted outer membrane lipoprotein 137 79 Op 4 7/0.040 + CDS 140761 - 141054 197 ## COG3790 Predicted membrane protein + Term 141076 - 141111 4.3 + Prom 141104 - 141163 3.2 138 80 Op 1 13/0.000 + CDS 141318 - 141608 233 ## COG0824 Predicted thioesterase 139 80 Op 2 30/0.000 + CDS 141605 - 142297 751 ## COG0811 Biopolymer transport proteins 140 80 Op 3 8/0.000 + CDS 142301 - 142729 462 ## COG0848 Biopolymer transport protein 141 80 Op 4 8/0.000 + CDS 142794 - 143372 362 ## COG3064 Membrane protein involved in colicin uptake + Prom 144080 - 144139 4.0 142 80 Op 5 20/0.000 + CDS 144191 - 145483 1385 ## COG0823 Periplasmic component of the Tol biopolymer transport system 143 80 Op 6 13/0.000 + CDS 145518 - 146039 660 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 144 80 Op 7 6/0.100 + CDS 146049 - 146840 521 ## COG1729 Uncharacterized protein conserved in bacteria + TRNA 147005 - 147080 99.5 # Lys TTT 0 0 + TRNA 147216 - 147291 94.3 # Val TAC 0 0 + TRNA 147294 - 147369 99.5 # Lys TTT 0 0 + TRNA 147519 - 147594 94.3 # Val TAC 0 0 + TRNA 147598 - 147673 99.5 # Lys TTT 0 0 + TRNA 147820 - 147895 99.5 # Lys TTT 0 0 + Prom 148002 - 148061 4.5 145 81 Op 1 5/0.240 + CDS 148153 - 149187 648 ## COG0379 Quinolinate synthase 146 81 Op 2 . + CDS 149240 - 149944 601 ## COG3201 Nicotinamide mononucleotide transporter - Term 149896 - 149932 4.7 147 82 Tu 1 . - CDS 149941 - 150882 734 ## COG1230 Co/Zn/Cd efflux system component - Prom 150906 - 150965 6.0 - Term 150941 - 150974 2.1 148 83 Tu 1 . - CDS 150996 - 151376 339 ## B21_00695 hypothetical protein + Prom 151592 - 151651 6.1 149 84 Tu 1 . + CDS 151692 - 152744 1063 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase + Term 152857 - 152889 2.8 - Term 152843 - 152877 3.2 150 85 Tu 1 4/0.460 - CDS 152902 - 153654 1075 ## COG0588 Phosphoglycerate mutase 1 - Prom 153689 - 153748 4.1 - Term 153816 - 153854 6.1 151 86 Op 1 6/0.100 - CDS 153859 - 154899 1162 ## COG2017 Galactose mutarotase and related enzymes 152 86 Op 2 8/0.000 - CDS 154893 - 156041 1142 ## COG0153 Galactokinase 153 86 Op 3 3/0.720 - CDS 156045 - 157091 726 ## COG1085 Galactose-1-phosphate uridylyltransferase 154 86 Op 4 . - CDS 157101 - 158117 1064 ## COG1087 UDP-glucose 4-epimerase - Prom 158239 - 158298 7.5 155 87 Op 1 4/0.460 - CDS 158378 - 159850 177 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 156 87 Op 2 . - CDS 159918 - 160706 842 ## COG2005 N-terminal domain of molybdenum-binding protein - Prom 160828 - 160887 3.0 + Prom 160754 - 160813 6.1 157 88 Tu 1 . + CDS 160835 - 160984 126 ## ECSE_0815 hypothetical protein + Term 160991 - 161026 4.5 + Prom 161000 - 161059 4.3 158 89 Op 1 23/0.000 + CDS 161151 - 161924 857 ## COG0725 ABC-type molybdate transport system, periplasmic component 159 89 Op 2 13/0.000 + CDS 161924 - 162613 603 ## COG4149 ABC-type molybdate transport system, permease component 160 89 Op 3 . + CDS 162616 - 163674 1140 ## COG4148 ABC-type molybdate transport system, ATPase component 161 90 Tu 1 . - CDS 163675 - 164493 1036 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 164598 - 164657 6.0 162 91 Tu 1 . + CDS 164648 - 165643 939 ## COG2706 3-carboxymuconate cyclase + Term 165656 - 165691 6.4 - Term 165522 - 165568 5.0 163 92 Tu 1 . - CDS 165684 - 166517 555 ## COG0583 Transcriptional regulator - Prom 166681 - 166740 6.7 + Prom 166574 - 166633 4.8 164 93 Op 1 3/0.720 + CDS 166821 - 167873 756 ## COG2828 Uncharacterized protein conserved in bacteria 165 93 Op 2 . + CDS 167949 - 169382 1758 ## COG0471 Di- and tricarboxylate transporters + Prom 169470 - 169529 4.4 166 94 Tu 1 . + CDS 169565 - 171826 2226 ## COG1048 Aconitase A + Term 171843 - 171897 7.3 167 95 Tu 1 . - CDS 172060 - 173343 1411 ## COG4677 Pectin methylesterase - Prom 173391 - 173450 3.5 168 96 Op 1 4/0.460 - CDS 173495 - 173971 452 ## COG1881 Phospholipid-binding protein 169 96 Op 2 . - CDS 174030 - 175262 1238 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase - Prom 175353 - 175412 3.9 + Prom 175303 - 175362 3.2 170 97 Op 1 12/0.000 + CDS 175406 - 176446 1209 ## COG0502 Biotin synthase and related enzymes 171 97 Op 2 6/0.100 + CDS 176443 - 177597 999 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 172 97 Op 3 9/0.000 + CDS 177584 - 178339 520 ## COG0500 SAM-dependent methyltransferases 173 97 Op 4 3/0.720 + CDS 178332 - 179009 470 ## COG0132 Dethiobiotin synthetase + Term 179166 - 179208 1.1 + Prom 179478 - 179537 6.9 174 98 Tu 1 . + CDS 179588 - 181609 2390 ## COG0556 Helicase subunit of the DNA excision repair complex - Term 181634 - 181672 -0.8 175 99 Tu 1 . - CDS 181801 - 182709 910 ## COG0391 Uncharacterized conserved protein - Prom 182862 - 182921 3.7 + Prom 182897 - 182956 4.2 176 100 Op 1 6/0.100 + CDS 183106 - 184095 775 ## COG2896 Molybdenum cofactor biosynthesis enzyme 177 100 Op 2 11/0.000 + CDS 184117 - 184629 608 ## COG0521 Molybdopterin biosynthesis enzymes 178 100 Op 3 11/0.000 + CDS 184632 - 185117 676 ## COG0315 Molybdenum cofactor biosynthesis enzyme 179 100 Op 4 21/0.000 + CDS 185110 - 185355 301 ## COG1977 Molybdopterin converting factor, small subunit 180 100 Op 5 5/0.240 + CDS 185357 - 185809 636 ## COG0314 Molybdopterin converting factor, large subunit + Prom 185861 - 185920 1.9 181 101 Tu 1 . + CDS 185946 - 186650 778 ## COG0670 Integral membrane protein, interacts with FtsH + Term 186668 - 186702 4.3 + Prom 186939 - 186998 2.9 182 102 Op 1 . + CDS 187125 - 187499 146 ## ECO103_0822 hypothetical protein 183 102 Op 2 . + CDS 187569 - 188282 267 ## COG0670 Integral membrane protein, interacts with FtsH 184 103 Op 1 5/0.240 - CDS 188318 - 189274 1070 ## COG0392 Predicted integral membrane protein 185 103 Op 2 8/0.000 - CDS 189274 - 190515 1285 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 186 103 Op 3 . - CDS 190512 - 191273 574 ## COG3568 Metal-dependent hydrolase - Prom 191380 - 191439 1.5 + Prom 191256 - 191315 3.0 187 104 Tu 1 . + CDS 191406 - 191816 478 ## G2583_1019 inner membrane protein YbhQ 188 105 Op 1 22/0.000 - CDS 191778 - 192884 1277 ## COG0842 ABC-type multidrug transport system, permease component 189 105 Op 2 45/0.000 - CDS 192895 - 194028 1464 ## COG0842 ABC-type multidrug transport system, permease component 190 105 Op 3 10/0.000 - CDS 194021 - 195757 343 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 191 105 Op 4 15/0.000 - CDS 195750 - 196745 1286 ## COG0845 Membrane-fusion protein 192 105 Op 5 . - CDS 196748 - 197419 688 ## COG1309 Transcriptional regulator - Prom 197448 - 197507 3.6 + Prom 197470 - 197529 2.9 193 106 Tu 1 . + CDS 197648 - 199012 1462 ## COG0513 Superfamily II DNA and RNA helicases - Term 199053 - 199089 2.4 194 107 Tu 1 . - CDS 199244 - 199693 393 ## COG3236 Uncharacterized protein conserved in bacteria - Prom 199814 - 199873 2.6 + Prom 199760 - 199819 2.5 195 108 Op 1 4/0.460 + CDS 199846 - 201996 2129 ## COG1199 Rad3-related DNA helicases 196 108 Op 2 3/0.720 + CDS 202024 - 202992 1028 ## COG0547 Anthranilate phosphoribosyltransferase + Term 203005 - 203038 3.0 + Prom 203041 - 203100 2.3 197 109 Tu 1 . + CDS 203133 - 204218 1237 ## COG2055 Malate/L-lactate dehydrogenases + Term 204383 - 204441 9.1 - Term 204213 - 204246 5.2 198 110 Tu 1 . - CDS 204447 - 204707 327 ## EC55989_0846 hypothetical protein 199 111 Op 1 1/0.960 - CDS 204972 - 205238 274 ## COG1734 DnaK suppressor protein 200 111 Op 2 2/0.800 - CDS 205312 - 205989 725 ## COG3128 Uncharacterized iron-regulated protein - Term 205996 - 206021 -0.5 201 111 Op 3 . - CDS 206031 - 208313 1988 ## COG4774 Outer membrane receptor for monomeric catechols - Prom 208430 - 208489 3.7 - Term 208530 - 208563 2.2 202 112 Tu 1 . - CDS 208578 - 208838 262 ## ECIAI1_0844 hypothetical protein - Prom 208940 - 208999 8.7 + Prom 208948 - 209007 5.3 203 113 Tu 1 . + CDS 209114 - 210040 852 ## COG3129 Predicted SAM-dependent methyltransferase 204 114 Tu 1 . - CDS 210037 - 212262 1985 ## COG0668 Small-conductance mechanosensitive channel - Prom 212290 - 212349 5.6 - Term 212326 - 212378 4.6 205 115 Op 1 34/0.000 - CDS 212379 - 213101 594 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 206 115 Op 2 31/0.000 - CDS 213098 - 213757 960 ## COG0765 ABC-type amino acid transport system, permease component 207 115 Op 3 4/0.460 - CDS 213896 - 214642 1063 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 214689 - 214748 4.1 - Term 214967 - 215010 9.5 208 116 Tu 1 . - CDS 215046 - 215549 599 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) - Prom 215589 - 215648 4.8 - Term 215797 - 215839 10.1 209 117 Tu 1 . - CDS 215848 - 216675 940 ## COG5006 Predicted permease, DMT superfamily - Prom 216706 - 216765 2.0 + Prom 217003 - 217062 4.6 210 118 Tu 1 . + CDS 217088 - 217603 559 ## COG3637 Opacity protein and related surface antigens + Term 217618 - 217661 7.7 - Term 217614 - 217641 -0.9 211 119 Tu 1 . - CDS 217652 - 219235 1377 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 219351 - 219410 2.2 + Prom 219716 - 219775 4.1 212 120 Op 1 4/0.460 + CDS 219821 - 220288 491 ## COG1321 Mn-dependent transcriptional regulator 213 120 Op 2 . + CDS 220285 - 221403 1017 ## COG0471 Di- and tricarboxylate transporters + Term 221422 - 221454 3.1 - Term 221405 - 221446 3.0 214 121 Tu 1 . - CDS 221462 - 222382 1114 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 222438 - 222497 4.9 + Prom 222423 - 222482 4.1 215 122 Op 1 . + CDS 222601 - 224193 1992 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 216 122 Op 2 . + CDS 224259 - 224408 72 ## SbBS512_E1227 hypothetical protein Predicted protein(s) >gi|299856447|gb|ADWV01000004.1| GENE 1 1 - 231 243 76 aa, chain + ## HITS:1 COG:no KEGG:EcHS_A1120 NR:ns ## KEGG: EcHS_A1120 # Name: not_defined # Def: IS621, transposase # Organism: E.coli_HS # Pathway: not_defined # 1 76 251 326 326 146 100.0 3e-34 MSKAGHVSLRRALYMPAMVATSKTEWGRAFRDRLAANGKKGKVILGAMMRKLAQVAYGVL KSGVPFDASRHNPVAA >gi|299856447|gb|ADWV01000004.1| GENE 2 425 - 1396 1003 323 aa, chain - ## HITS:1 COG:ECs2581 KEGG:ns NR:ns ## COG: ECs2581 COG0500 # Protein_GI_number: 15831835 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 665 99.0 0 MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLL HSVTAESEEPLSTGQIKRIETLMRNLMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSD LTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLG IEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPG DRYAQMRNVYFIPSALALKNWLKKCGFVDIRIVDVCVTTTEEQRRTEWMVTESLSDFLDP HDPSKTVEGYPAPKRAVLIARKP >gi|299856447|gb|ADWV01000004.1| GENE 3 1393 - 2136 826 247 aa, chain - ## HITS:1 COG:ECs2580 KEGG:ns NR:ns ## COG: ECs2580 COG0500 # Protein_GI_number: 15831834 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 514 100.0 1e-146 MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPGTQV YDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD IAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNM HHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQCFNFGSLVA LKAEDAA >gi|299856447|gb|ADWV01000004.1| GENE 4 2177 - 2572 475 131 aa, chain - ## HITS:1 COG:ECs2579 KEGG:ns NR:ns ## COG: ECs2579 COG3788 # Protein_GI_number: 15831833 # Func_class: R General function prediction only # Function: Uncharacterized relative of glutathione S-transferase, MAPEG superfamily # Organism: Escherichia coli O157:H7 # 1 131 11 141 141 228 100.0 2e-60 MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAIRIHGNAVEYIPIAIVL MLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW YMPWELVFSLR >gi|299856447|gb|ADWV01000004.1| GENE 5 2625 - 3443 508 272 aa, chain - ## HITS:1 COG:yecE KEGG:ns NR:ns ## COG: yecE COG1801 # Protein_GI_number: 16129821 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 272 1 272 272 542 100.0 1e-154 MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRF CFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDS LPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNRVILDSRPVHAARPHSEAIRDAQR KKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQ APELVHTLWEDLRKTLPEIGAVPAIPQQSSLF >gi|299856447|gb|ADWV01000004.1| GENE 6 3440 - 4006 513 188 aa, chain - ## HITS:1 COG:ECs2577 KEGG:ns NR:ns ## COG: ECs2577 COG1335 # Protein_GI_number: 15831831 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli O157:H7 # 1 188 12 199 199 370 98.0 1e-103 MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSA DHAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDVELQLRRRG IDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRS VEEILHAL >gi|299856447|gb|ADWV01000004.1| GENE 7 4316 - 6088 2247 590 aa, chain + ## HITS:1 COG:aspS KEGG:ns NR:ns ## COG: aspS COG0173 # Protein_GI_number: 16129819 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 590 1 590 590 1197 99.0 0 MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLA SELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLDSNHVNTEEA RLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPS RVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT APQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLK SVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERAKG LEGINSPVAKFLNAEIIEAILDRTAAQDGDMIFFGADNKKIVADAMGALRLKVGKDLGLT DESKWAPLWVIDFPMFEDDGEGGLTAMHHPFTSPKDMTAAELKAAPENAVANAYDMVING YEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTM LLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSIQVVKKAENN >gi|299856447|gb|ADWV01000004.1| GENE 8 6149 - 6658 355 169 aa, chain + ## HITS:1 COG:ECs2575 KEGG:ns NR:ns ## COG: ECs2575 COG0494 # Protein_GI_number: 15831829 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 20 169 1 150 150 292 99.0 2e-79 MSIDNYVNGMSEGSQRRGSVKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTG SVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTES WFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA >gi|299856447|gb|ADWV01000004.1| GENE 9 6687 - 7427 1041 246 aa, chain + ## HITS:1 COG:ECs2574 KEGG:ns NR:ns ## COG: ECs2574 COG0217 # Protein_GI_number: 15831828 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 444 99.0 1e-125 MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNN MTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKC GGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMG KVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISD EVAATL >gi|299856447|gb|ADWV01000004.1| GENE 10 7462 - 7983 544 173 aa, chain + ## HITS:1 COG:ECs2573 KEGG:ns NR:ns ## COG: ECs2573 COG0817 # Protein_GI_number: 15831827 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 302 100.0 2e-82 MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQ PDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIGSAEKS QVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR >gi|299856447|gb|ADWV01000004.1| GENE 11 7985 - 8587 252 200 aa, chain - ## HITS:1 COG:no KEGG:SSON_1279 NR:ns ## KEGG: SSON_1279 # Name: yebB # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 200 1 200 200 419 100.0 1e-116 MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLST ITTLSRFIKRSSNQRYAIKRLDAGLTEQQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSK FVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPG LVLIHAEGVETPQPELTEAV >gi|299856447|gb|ADWV01000004.1| GENE 12 8861 - 9472 637 203 aa, chain + ## HITS:1 COG:ECs2571 KEGG:ns NR:ns ## COG: ECs2571 COG0632 # Protein_GI_number: 15831825 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Escherichia coli O157:H7 # 1 203 1 203 203 378 99.0 1e-105 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPTTDDAEQEAVAALVALGYKPQEASRM VSKIARPDASSETLIREALRAAL >gi|299856447|gb|ADWV01000004.1| GENE 13 9481 - 10491 1177 336 aa, chain + ## HITS:1 COG:ECs2570 KEGG:ns NR:ns ## COG: ECs2570 COG2255 # Protein_GI_number: 15831824 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Escherichia coli O157:H7 # 1 336 1 336 336 644 100.0 0 MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLI FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR LEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG TISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV LEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPEMP >gi|299856447|gb|ADWV01000004.1| GENE 14 10638 - 11423 921 261 aa, chain - ## HITS:1 COG:ECs2569 KEGG:ns NR:ns ## COG: ECs2569 COG1108 # Protein_GI_number: 15831823 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 261 1 261 261 395 98.0 1e-110 MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLDVNPFYAV IAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLGLVVVSLMSNIRVDLMAYLFGDLL AVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFVDGVKLQRVKLLLMLVTALTI GVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAVLVGMVAVTGGLTFSAFYDTPAG PSVVLCAALLFILSMMKKQAS >gi|299856447|gb|ADWV01000004.1| GENE 15 11420 - 12175 219 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 202 1 212 305 89 29 2e-16 MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGV IKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQAGHLINAPMQK LSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHD LHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFGPRGAEQLGIYRHHHNHRHDLQG RIVLRRGNDRS >gi|299856447|gb|ADWV01000004.1| GENE 16 12239 - 13186 471 315 aa, chain + ## HITS:1 COG:ECs2567 KEGG:ns NR:ns ## COG: ECs2567 COG4531 # Protein_GI_number: 15831821 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Zn2+ transport system, periplasmic component/surface adhesin # Organism: Escherichia coli O157:H7 # 1 315 14 328 328 610 99.0 1e-174 MIGRIMLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIADGVTETEVLLPD GASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPEAKQVTIAQLEDVKPLLM KSIHGDDDDHDHAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHGKLVELMPQSRAKLDA NLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGA QRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTLDPLGTNIKLGKTSYSEF LSQLANQYASCLKGD >gi|299856447|gb|ADWV01000004.1| GENE 17 13202 - 14524 1268 440 aa, chain + ## HITS:1 COG:ECs2566 KEGG:ns NR:ns ## COG: ECs2566 COG0739 # Protein_GI_number: 15831820 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Escherichia coli O157:H7 # 22 440 1 419 419 823 100.0 0 MQQIARSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHRDATPIVKTIELEQNEIR SLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVSTGDTLSSILNQYGIDMGDI TQLAAADKELRNLKIGQQLSWTLTADGELQRLTWEVSRRETRTYDRTAANGFKMTSEMQQ GEWVNNLLKGTVGGSFVASARNAGLTSAEVSAVIKAMQWQMDFRKLKKGDEFAVLMSREM LDGKREQSQLLGVRLRSEGKDYYAIRAEDGKFYDRNGTGLAKGFLRFPTAKQFRISSNFN PRRTNPVTGRVAPHRGVDFAMPQGTPVLSVGDGEVVVAKRSGAAGYYVAIRHGRSYTTRY MHLRKILVKPGQKVKRGDRIALSGNTGRSTGPHLHYEVWINQQAVNPLTAKLPRTEGLTG SDRREFLAQAKEIVPQLRFD >gi|299856447|gb|ADWV01000004.1| GENE 18 14644 - 15615 837 323 aa, chain + ## HITS:1 COG:msbB KEGG:ns NR:ns ## COG: msbB COG1560 # Protein_GI_number: 16129808 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli K12 # 1 323 1 323 323 654 100.0 0 METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGK SSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAELAIRGPEKIQPRVDWQGL EIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTVRRRF GGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVC RARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWIL KLLKTRKPGEIQPYKRKDLYPIK >gi|299856447|gb|ADWV01000004.1| GENE 19 15747 - 17189 1442 480 aa, chain - ## HITS:1 COG:pykA KEGG:ns NR:ns ## COG: pykA COG0469 # Protein_GI_number: 16129807 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Escherichia coli K12 # 1 480 1 480 480 883 99.0 0 MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAR LGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPAD VVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKA DIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDAKIVAKVERAEAVCSQDAMDDII LASDVVMVARGDLGVEIGDPELVGIQKALIRRARQLNRAVITATQMMESMITNPMPTRAE VMDVANAVLDGTDAVMLSAETAAGQYPSETVAAMARVCLGAEKIPSINVSKHRLDVQFDN VEEAIAMSAMYAANHLKGVTAIITMTESGRTALMTSRISSGLPIFAMSRHERTLNLTALY RGVTPVHFDSANDGVAAASEAVNLLRDKGYLMSGDLVIVTQGDVMSTVGSTNTTRILTVE >gi|299856447|gb|ADWV01000004.1| GENE 20 17317 - 18186 709 289 aa, chain - ## HITS:1 COG:ECs2563 KEGG:ns NR:ns ## COG: ECs2563 COG1737 # Protein_GI_number: 15831817 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 538 99.0 1e-153 MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAALALEANVSEPTVNRFCRSMDT RGFPDFKLHLAQSMANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINR AVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVV LISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSR LAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKQLLNLSDDR >gi|299856447|gb|ADWV01000004.1| GENE 21 18524 - 19999 1693 491 aa, chain + ## HITS:1 COG:zwf KEGG:ns NR:ns ## COG: zwf COG0364 # Protein_GI_number: 16129805 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Escherichia coli K12 # 1 491 1 491 491 1010 99.0 0 MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTRIIGVGRADWDKAAYTK VVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFSRLGAMLDQKNRITINYFAMP PSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSREINDQVGEYFEECQVYRIDHYLG KETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDKAGQMRDMIQNHL LQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPG YLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLF KESWQDLPQNKLTIRLQPDEGVDIQVLNKVPGLDHKHNLQITKLDLSYSETFNQTHLADA YERLLLETMRGIQALFVRRDEVEEAWKWVDSITEAWAMDNDAPKPYQAGTWGPVASVAMI TRDGRSWNEFE >gi|299856447|gb|ADWV01000004.1| GENE 22 20234 - 22045 1707 603 aa, chain + ## HITS:1 COG:ECs2561 KEGG:ns NR:ns ## COG: ECs2561 COG0129 # Protein_GI_number: 15831815 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli O157:H7 # 1 603 1 603 603 1207 100.0 0 MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGNLAHGFAACQPEDKASL KSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVGQVAGGVPAMCDGVTQGQD GMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPGLTMAALSFGHLPAVFVPSGP MASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAPGTCTFYGTANTNQMVVEFMGMQ LPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWMPIGKMIDEKVVVNGIVALLATGGS TNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMARLYPNGPADINHFQAAGGVPVLVREL LKAGLLHEDVNTVAGFGLSRYTLEPWLNNGELDWREGAEKSLDSNVIASFEQPFSHHGGT KVLSGNLGRAVMKTSAVPVENQVIEAPAVVFESQHDVMPAFEAGLLDRDCVVVVRHQGPK ANGMPELHKLMPPLGVLLDRCFKIALVTDGRLSGASGKVPSAIHVTPEAYDGGLLAKVRD GDIIRVNGQTGELTLLVDEAELAAREPHIPDLSASRVGTGRELFSALREKLSGAEQGATC ITF >gi|299856447|gb|ADWV01000004.1| GENE 23 22082 - 22723 911 213 aa, chain + ## HITS:1 COG:STM1884 KEGG:ns NR:ns ## COG: STM1884 COG0800 # Protein_GI_number: 16765226 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Salmonella typhimurium LT2 # 1 212 1 212 213 373 97.0 1e-103 MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAI AKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIPLIPGISTVSE LMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLC IGGSWLVPADALEAGDYDRITKLAREAVEGAKL >gi|299856447|gb|ADWV01000004.1| GENE 24 22779 - 23957 1252 392 aa, chain - ## HITS:1 COG:purT KEGG:ns NR:ns ## COG: purT COG0027 # Protein_GI_number: 16129802 # Func_class: F Nucleotide transport and metabolism # Function: Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) # Organism: Escherichia coli K12 # 1 392 1 392 392 752 99.0 0 MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYSDAPAMHVAHRSHVIN MLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEEGLNVVPCARATKLTMNREGIRRL AAEELQLPTSTYRFADSESLFREAVAAIGYPCIVKPVMSSSGKGQTFIRSAEQLAQAWEY AQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFCAPVGHRQEDGDYRESWQPQQMS PLALERAQEIARKVVLALGGYGLFGVELFVCGDEVIFSEVSPRPHDTGMVTLISQDLSEF ALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQNVTFDNVQNAVGADLQIRLFGKPEIDG SRRLGVALATAESVVDAIERAKHAAGQVKVQG >gi|299856447|gb|ADWV01000004.1| GENE 25 24091 - 24381 346 96 aa, chain + ## HITS:1 COG:ECs2558 KEGG:ns NR:ns ## COG: ECs2558 COG3141 # Protein_GI_number: 15831812 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 148 100.0 2e-36 MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLW LAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA >gi|299856447|gb|ADWV01000004.1| GENE 26 24448 - 24804 196 118 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_1203 NR:ns ## KEGG: ECIAI39_1203 # Name: yebF # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 118 5 122 122 222 100.0 4e-57 MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIAASVKRDYQQNRVARWA DDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR >gi|299856447|gb|ADWV01000004.1| GENE 27 24718 - 24924 97 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|188494878|ref|ZP_03002148.1| ## NR: gi|188494878|ref|ZP_03002148.1| hypothetical protein Ec53638_0054 [Escherichia coli 53638] # 1 68 1 68 68 132 100.0 6e-30 MLIARCDAVASSQAYDCGAFWGGQGTRAASANGQSNYQKPLTPLIFRHSRFAVHADLVMN IGTFTTHG >gi|299856447|gb|ADWV01000004.1| GENE 28 25131 - 25790 843 219 aa, chain + ## HITS:1 COG:ECs2556 KEGG:ns NR:ns ## COG: ECs2556 COG2979 # Protein_GI_number: 15831810 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 348 98.0 5e-96 MANWLNQLQSLLGQSSSSTSSSADQGLGKLLVPGALGGLAGLLVANKSARKLLTKYGTNA LLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERTERLILALVFAAKSDGHID AKERAAIDQQLREAGVEEQGRVLIEQAIEQPLDPQRLATGVRNEEEALEIYFLSCAAIDI DHFMERSYLNALGDALKIPQDVRDGIERDLEQQKRTLAE >gi|299856447|gb|ADWV01000004.1| GENE 29 25999 - 28059 1889 686 aa, chain + ## HITS:1 COG:ptrB KEGG:ns NR:ns ## COG: ptrB COG1770 # Protein_GI_number: 16129798 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Escherichia coli K12 # 1 686 1 686 686 1404 99.0 0 MLPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLQQENSYGHRVMASQQALQDR ILKEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQRQSAFSEEWDEWEILLDANKR AAHSEFYSMGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWA NDSWTFYYVRKHPVTLLPYQVWRHAIGTPASQDKLIYEEKDDTYYVSLHKTTSKHYVVIH LASATTSEVRLLDAEMADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRM RDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAY VTWIAYNPEPETARLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDAANYRSEHLW IVARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIV HVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGV AINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDN VTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFK SYEGVAMEYAFLVALAQGTLPATPAD >gi|299856447|gb|ADWV01000004.1| GENE 30 28056 - 28718 766 220 aa, chain - ## HITS:1 COG:exoX KEGG:ns NR:ns ## COG: exoX COG0847 # Protein_GI_number: 16129797 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Escherichia coli K12 # 1 220 1 220 220 459 100.0 1e-129 MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPISPQAMAIHRITEAMVAD KPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKLARRLWPGIKYSNMALYKT RKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQMADITGRPSLMTTFTFGKYR GKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLENT >gi|299856447|gb|ADWV01000004.1| GENE 31 28742 - 29398 411 218 aa, chain - ## HITS:1 COG:yobB KEGG:ns NR:ns ## COG: yobB COG0388 # Protein_GI_number: 16129796 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli K12 # 1 218 1 218 218 443 99.0 1e-124 MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPSLSLLGCDYSRRALPAP PDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPWRKTPGIYHQSHGACLGRR SRTITVVDEQPEGMDMDPTCSLFTTGQCLGEPDLLASARRLQFFSHQYSIAVLMANARGN SALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR >gi|299856447|gb|ADWV01000004.1| GENE 32 29500 - 29730 330 76 aa, chain - ## HITS:1 COG:no KEGG:ECP_1786 NR:ns ## KEGG: ECP_1786 # Name: not_defined # Def: DNA polymerase III subunit theta (EC:2.7.7.7) # Organism: E.coli_536 # Pathway: Purine metabolism [PATH:ecp00230]; Pyrimidine metabolism [PATH:ecp00240]; Metabolic pathways [PATH:ecp01100]; DNA replication [PATH:ecp03030]; Mismatch repair [PATH:ecp03430]; Homologous recombination [PATH:ecp03440] # 1 76 30 105 105 136 100.0 2e-31 MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQPEHLRSWFRERLIAHR LASVNLSRLPYEPKLK >gi|299856447|gb|ADWV01000004.1| GENE 33 29869 - 30243 357 124 aa, chain + ## HITS:1 COG:yobA KEGG:ns NR:ns ## COG: yobA COG2372 # Protein_GI_number: 16129794 # Func_class: R General function prediction only # Function: Uncharacterized protein, homolog of Cu resistance protein CopC # Organism: Escherichia coli K12 # 1 124 1 124 124 222 98.0 2e-58 MTSTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGF SGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYIVDWHVVSVDGHKTKGHYT FSVK >gi|299856447|gb|ADWV01000004.1| GENE 34 30247 - 31119 739 290 aa, chain + ## HITS:1 COG:yebZ KEGG:ns NR:ns ## COG: yebZ COG1276 # Protein_GI_number: 16129793 # Func_class: P Inorganic ion transport and metabolism # Function: Putative copper export protein # Organism: Escherichia coli K12 # 1 290 1 290 290 467 97.0 1e-131 MLAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLAKRFLRLQQHAAVWSLISATA MLAVQGGLMGTGWADVFSPNIWQAVLQTQFGGVWLWQIVLALVTLIVALMQPRNVSRLLF MLTTAQFILLAGVGHATMNEGVTAKIHQTNHAIHLICAAAWFGGLLPVLWCMQLIKGRWR HQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPQLTTYWGQLLLLKAILVMIMVVI ALANRYVLVPRMRQDEDRAAPWFEWMTKLEWAIGAVVLVIISLLATLEPF >gi|299856447|gb|ADWV01000004.1| GENE 35 31132 - 31473 368 113 aa, chain + ## HITS:1 COG:no KEGG:ECO111_2347 NR:ns ## KEGG: ECO111_2347 # Name: yebY # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 113 1 113 113 195 100.0 5e-49 MMKKSILTFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPS TLVQYPLNDIAQKEVASGKTKAQPISVIQIDDPNNPGEKMSLAPFIERAEKLC >gi|299856447|gb|ADWV01000004.1| GENE 36 31869 - 32525 578 218 aa, chain + ## HITS:1 COG:pphA KEGG:ns NR:ns ## COG: pphA COG0639 # Protein_GI_number: 16129791 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Escherichia coli K12 # 1 218 2 219 219 424 99.0 1e-119 MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPWRDLLISVGDVIDRGPQ SLRCLQLLEQHWVRAVRGNHEQMAMDALASQQMSLWLMNGGDWFIALADNQQKQAKTALE KCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQVLWSRSRLGERQKGQGITGA DHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ >gi|299856447|gb|ADWV01000004.1| GENE 37 32526 - 32801 189 91 aa, chain - ## HITS:1 COG:no KEGG:SSON_1324 NR:ns ## KEGG: SSON_1324 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 91 1 91 91 192 100.0 2e-48 MAGYLSWLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCEDIVVDVYNTEQQCLYS MSDQRIRHGGCFPIEDFIDGFWRPAQEYGDF >gi|299856447|gb|ADWV01000004.1| GENE 38 32822 - 33058 242 78 aa, chain - ## HITS:1 COG:no KEGG:ECSP_2410 NR:ns ## KEGG: ECSP_2410 # Name: yebV # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 78 1 78 78 157 100.0 2e-37 MKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAWDAETSIPALLNGEHSV LYRTRYDQQSDAWIMRLA >gi|299856447|gb|ADWV01000004.1| GENE 39 33176 - 34615 1172 479 aa, chain - ## HITS:1 COG:yebU_1 KEGG:ns NR:ns ## COG: yebU_1 COG0144 # Protein_GI_number: 16129788 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Escherichia coli K12 # 1 383 3 385 385 775 97.0 0 MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPY GWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAAQR VMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVF GVAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGG TLVYSTCTLNREENEAVCMWLKETYPDAVEFLPLGELFPGANKALTEEGFLHVFPQIYDC EGFFVARLRKTQAIPALPTPTYKVGNFPFSPVKDREAGQIRQAAAGVGLNWDENLRLWQR DKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALASPDNMNAFELTPQE AEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTGNA >gi|299856447|gb|ADWV01000004.1| GENE 40 34695 - 37334 2453 879 aa, chain - ## HITS:1 COG:yebT KEGG:ns NR:ns ## COG: yebT COG3008 # Protein_GI_number: 16129787 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Escherichia coli K12 # 1 879 1 879 879 1732 99.0 0 MHMSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQDRGNTVTIDFMSADG IVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLA GVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGDLMIHLQAPDLGSLNSGSL VYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKV KLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADST PLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSAL LTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLTAPESYGIDAGQPLILHGVQV GQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWIN GGIRILPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKF EVGEVITVRPRANAFDIDLHIKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRA LKGAISFDNLSGASASQRKGDKRILYASETAARAVGGQITLHAFDAGKLAVGMPIRYLGI DIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPY INVEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTG MTLGTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGI AFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK >gi|299856447|gb|ADWV01000004.1| GENE 41 37297 - 38475 754 392 aa, chain - ## HITS:1 COG:ECs2543 KEGG:ns NR:ns ## COG: ECs2543 COG2995 # Protein_GI_number: 15831797 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Escherichia coli O157:H7 # 1 392 36 427 427 767 99.0 0 MLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLG IRIDANVMQGIWQMTKQGDTITGAMVFFCVIGAPLILVSSIAYLWFGNRLGMNLRPVLLM LERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWE RFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIV LLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTL LLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYF GAAVILTILAVEWLDSRLLWDAHESGNARFDD >gi|299856447|gb|ADWV01000004.1| GENE 42 38710 - 39207 303 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 [Streptococcus pneumoniae R6] # 3 159 6 161 165 121 41 3e-26 MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDVNWAGFYLLEDDTLVLGPF QGKIACVRIPVGRGVCGTAVARNQVQRIEDVHAFDGHIACDAASNSEIVLPLVVKNQIIG VLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFFASVAG >gi|299856447|gb|ADWV01000004.1| GENE 43 39304 - 40002 588 232 aa, chain + ## HITS:1 COG:proQm KEGG:ns NR:ns ## COG: proQm COG3109 # Protein_GI_number: 16132234 # Func_class: T Signal transduction mechanisms # Function: Activator of osmoprotectant transporter ProP # Organism: Escherichia coli K12 # 1 232 1 232 232 385 99.0 1e-107 MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEMNLSKTQLRSA LRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQLEEAKARVQAQRAEQQAK KREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQKPVEKAPKTVKAPREEQHTPV SDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLNSGMSLIVRAEHLVF >gi|299856447|gb|ADWV01000004.1| GENE 44 40022 - 42070 2020 682 aa, chain + ## HITS:1 COG:ECs2540 KEGG:ns NR:ns ## COG: ECs2540 COG0793 # Protein_GI_number: 15831794 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Escherichia coli O157:H7 # 1 682 1 682 682 1320 99.0 0 MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATVSERVTSRFTRSHYRQF DLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGDELRSGKLDVFYDLYNLAQ KRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEAELNALWDSKVKFDELSLKLA GKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTE MSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRL DDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLTRERIRLEDRAVKMSVKTVGKEKVGVL DIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQVR DNNGKVREDSDTDGQVFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTV QQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDIIMPTGNEETETG EKFEDNALPWDSIDAATYVKSGDLTAFGPELLKEHNARIAKDPEFQNIMKDIARFNAMKD KRNIVSLNYAVREKENNEDDATRLARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETV NIALDLAKLEKARPAEQPAPVK >gi|299856447|gb|ADWV01000004.1| GENE 45 42262 - 43143 943 293 aa, chain + ## HITS:1 COG:ECs2539 KEGG:ns NR:ns ## COG: ECs2539 COG0501 # Protein_GI_number: 15831793 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 1 293 1 293 293 550 100.0 1e-156 MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGFGGSFVSLLMSKWMALR SVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAPDINAFATGARRDASLVAV STGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVNTFVIFISRILAQLAAGFMGG NRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFSRHREFHADAGSAKLVGREKMIA ALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTHPPLDKRIEALRTGEYLK >gi|299856447|gb|ADWV01000004.1| GENE 46 43189 - 44562 901 457 aa, chain - ## HITS:1 COG:yebQ KEGG:ns NR:ns ## COG: yebQ COG0477 # Protein_GI_number: 16129782 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 457 38 494 494 752 99.0 0 MPKVQADGLPLPQRYGAILTIVIGISMAVLDGAIANVALPTIATDLHATPASSIWVVNAY QIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAA LMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLG IIALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLLITALSGFAQGQSLTLIATELVV MVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICTSVCSFCAQMLAMVSLPFYLQTVLG RSEVETGLLLTPWPLATMVMAPLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPAD INIIWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGMLGTARLLGQSSGAALVALML NQFGDNGTHVSLMAAAILAVIAACVSGLRITQPRSRA >gi|299856447|gb|ADWV01000004.1| GENE 47 44739 - 45530 870 263 aa, chain + ## HITS:1 COG:ECs2537 KEGG:ns NR:ns ## COG: ECs2537 COG1414 # Protein_GI_number: 15831791 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 494 100.0 1e-140 MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKTLGY VAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREISRLTKETIHLGALDEDSIVY IHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEVKQILEGVEYKRSTERTITST EALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTLRFSEERLQE YVAMLHTAARKISAQMGYHDYPF >gi|299856447|gb|ADWV01000004.1| GENE 48 45673 - 45912 232 79 aa, chain - ## HITS:1 COG:no KEGG:ECO103_2017 NR:ns ## KEGG: ECO103_2017 # Name: yobH # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 79 1 79 79 141 100.0 8e-33 MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLTARGTSTVQYLHTKSGF LGITDCPLLRKSNIVVDNG >gi|299856447|gb|ADWV01000004.1| GENE 49 46289 - 46576 259 95 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1877 NR:ns ## KEGG: ECS88_1877 # Name: yebO # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 95 1 95 95 134 100.0 1e-30 MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIELLEALLDQQKRQNALL RRLCEANEPEKADKKTVESQKSVEDEDIIRLVAER >gi|299856447|gb|ADWV01000004.1| GENE 50 47401 - 47610 333 69 aa, chain + ## HITS:1 COG:ECs2533 KEGG:ns NR:ns ## COG: ECs2533 COG1278 # Protein_GI_number: 15831787 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 120 100.0 5e-28 MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG PAAVNVTAI >gi|299856447|gb|ADWV01000004.1| GENE 51 47860 - 48585 611 241 aa, chain + ## HITS:1 COG:ECs2532 KEGG:ns NR:ns ## COG: ECs2532 COG0500 # Protein_GI_number: 15831786 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 241 29 269 269 489 97.0 1e-138 MAKEGYVNLLPVQHKRSRDPGDSAEMIQARRAFLDAGHYQPLRDAIVAQLRERLDEKATA VLDIGCGEGYYTHAFADVLPEITTFGLDVSKVAIKAAAKRYPQVTLCVASSHRLPFSDTS MDAIIRIYAPCKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGF TLQQSDELCYPMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRS Y >gi|299856447|gb|ADWV01000004.1| GENE 52 48582 - 49148 626 188 aa, chain - ## HITS:1 COG:ECs2531 KEGG:ns NR:ns ## COG: ECs2531 COG1971 # Protein_GI_number: 15831785 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 188 19 206 206 324 100.0 5e-89 MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGML ASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAM AVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ ILWTHFHG >gi|299856447|gb|ADWV01000004.1| GENE 53 49577 - 50035 314 152 aa, chain - ## HITS:1 COG:yobD KEGG:ns NR:ns ## COG: yobD COG4811 # Protein_GI_number: 16129774 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 152 1 152 152 256 100.0 1e-68 MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYN NVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDG VLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ >gi|299856447|gb|ADWV01000004.1| GENE 54 50090 - 50941 1098 283 aa, chain - ## HITS:1 COG:ECs2529 KEGG:ns NR:ns ## COG: ECs2529 COG3716 # Protein_GI_number: 15831783 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 1 283 4 286 286 559 100.0 1e-159 MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCFSMVPAIRRLYPENNEA RKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDGAINGIKVGLMGPLAGVGD PIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLATRYYGVAYGYSKGIDIVKDM GGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSRITDQTGKEHVTTVQTILDQLMP GLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGYACGLLGL >gi|299856447|gb|ADWV01000004.1| GENE 55 50954 - 51754 1059 266 aa, chain - ## HITS:1 COG:ECs2528 KEGG:ns NR:ns ## COG: ECs2528 COG3715 # Protein_GI_number: 15831782 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 394 100.0 1e-109 MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIA LGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPLAAAGQVLTIIVRTITVAF QHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEVVTN GLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVLYIQ LSPKYNRVAGAPAQAAGNNDLDNELD >gi|299856447|gb|ADWV01000004.1| GENE 56 51817 - 52788 1241 323 aa, chain - ## HITS:1 COG:ECs2527_2 KEGG:ns NR:ns ## COG: ECs2527_2 COG3444 # Protein_GI_number: 15831781 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 158 323 1 166 166 311 100.0 1e-84 MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAETLIEKYNAQLAKLDTTK GVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETLMARDDDPSFDELVALAVE TGREGVKALKAKPVEKAAPAPAAAAPKAAPTPAKPMGPNDYMVIGLARIDDRLIHGQVAT RWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTAHVVDVAKMIRVYNNPKYAGERV MLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQVNNAVSVDEKDIEAFKKLNARGIE LEVRKVSTDPKLKMMDLISKIDK >gi|299856447|gb|ADWV01000004.1| GENE 57 53250 - 53570 199 106 aa, chain + ## HITS:1 COG:ECs2525_1 KEGG:ns NR:ns ## COG: ECs2525_1 COG0861 # Protein_GI_number: 15831779 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 60 1 60 240 111 100.0 4e-25 MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLG AAVADFMDGHADQTAIYRHGFLLLRTRPDYVVRGDILAVQSNNRTA >gi|299856447|gb|ADWV01000004.1| GENE 58 53452 - 54807 1498 451 aa, chain + ## HITS:1 COG:yoaE_2 KEGG:ns NR:ns ## COG: yoaE_2 COG1253 # Protein_GI_number: 16129770 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli K12 # 164 451 1 288 288 539 100.0 1e-153 MVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDHDSGHGKGYASFWV VVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFVNQHPTVVV LCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQSTLPLRAR TADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEEERYMINGVLTLASRSLRGIMTPR GEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEEGVDVAAIA SASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADE TPEIITDGDGWLVKGGTDLHALQQALDVEHLADDDDIATVAGLVISANGHIPRVGDVIDV GPLHITIIEANDYRVDLVRIVKEQPAHDEDE >gi|299856447|gb|ADWV01000004.1| GENE 59 54811 - 56409 1184 532 aa, chain - ## HITS:1 COG:yoaD_2 KEGG:ns NR:ns ## COG: yoaD_2 COG2200 # Protein_GI_number: 16129769 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 261 532 1 272 272 561 100.0 1e-159 MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV VDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ LPQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVSSQRFPFTINVNGPGATALAWHY LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE QAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIMPLR >gi|299856447|gb|ADWV01000004.1| GENE 60 56540 - 57904 1559 454 aa, chain - ## HITS:1 COG:sdaA KEGG:ns NR:ns ## COG: sdaA COG1760 # Protein_GI_number: 16129768 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli K12 # 1 454 1 454 454 925 100.0 0 MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTRVAVDVYGSLSLTGKGH HTDIAIIMGLAGNEPATVDIDSIPGFIRDVEERERLLLAQGRHEVDFPRDNGMRFHNGNL PLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQDAANEVSVPYPFKSATELLAY CNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQACIDRGMNTEGVLPGPLRVPRRA SALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYY DHFIESVSPDIYTRYFMAAGAIGALYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGG SPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPCIERNAIASVKAINAARMALRRTSAPRVS LDKVIETMYETGKDMNAKYRETSRGGLAIKVQCD >gi|299856447|gb|ADWV01000004.1| GENE 61 58088 - 58666 398 192 aa, chain - ## HITS:1 COG:ECs2522 KEGG:ns NR:ns ## COG: ECs2522 COG0494 # Protein_GI_number: 15831776 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 192 1 192 192 344 100.0 7e-95 MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAG QVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIP PDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEQYFVWGMTAGI IRELALQIGVKP >gi|299856447|gb|ADWV01000004.1| GENE 62 58670 - 60031 986 453 aa, chain - ## HITS:1 COG:ECs2521 KEGG:ns NR:ns ## COG: ECs2521 COG0147 # Protein_GI_number: 15831775 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Escherichia coli O157:H7 # 1 453 1 453 453 922 98.0 0 MKTLSPAVITLPWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYSRFDIVVADPICTLTTF GKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPFQGGALGLFGYDLGRRFES LPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDVNARRAWLESQQFSPQEDFTL TSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYSGDEWQAFLQLNQANRAP FSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGTLPRLPDPQEDSKQAEKLANSAKDR AENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHLVSTITARLPEQLHASDLLRA AFPGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSFCGNMDTSITIRTLTAINGQIY CSAGGGIVADSQEEAEYQETFDKVNKILRQLEK >gi|299856447|gb|ADWV01000004.1| GENE 63 60105 - 60284 328 59 aa, chain + ## HITS:1 COG:ECs2520 KEGG:ns NR:ns ## COG: ECs2520 COG3140 # Protein_GI_number: 15831774 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 59 1 59 59 83 100.0 1e-16 MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRANHSGERIVARFEDEDE >gi|299856447|gb|ADWV01000004.1| GENE 64 60463 - 60702 179 79 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1242 NR:ns ## KEGG: ECIAI39_1242 # Name: yoaC # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 72 21 92 119 140 100.0 1e-32 MPAVIDKALDFIGAMDVSAPTPSSMNESTAKGIFKYLKELGVPASAADITARADQEGWNP GFTEKMVGWAKKWRQVNAL >gi|299856447|gb|ADWV01000004.1| GENE 65 61125 - 61469 477 114 aa, chain - ## HITS:1 COG:yoaB KEGG:ns NR:ns ## COG: yoaB COG0251 # Protein_GI_number: 16129763 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 114 17 130 130 209 100.0 9e-55 MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLAQIDAVLEKQGSNKSSI LDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV >gi|299856447|gb|ADWV01000004.1| GENE 66 61601 - 63511 1672 636 aa, chain + ## HITS:1 COG:ECs2517 KEGG:ns NR:ns ## COG: ECs2517 COG1199 # Protein_GI_number: 15831771 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Escherichia coli O157:H7 # 1 636 1 636 636 1265 100.0 0 MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPAL RAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGG DLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPLVTSTNDNCLGSDCPMYKDCF VVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFDEAHQLPDIASQYFGQ SLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLA NPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRTRLKRLKEINQPGYSYW YECTSRHFTLALTPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFTSRLGIEQAESL LLPSPFDYSRQALLCVPRNLPQTNQPGSARQLAAMLRPIIEANNGRCFMLCTSHAMMRDL AEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKL PFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNR LVMRPYGATFLASLPPAPRTRDIARAVRFLAIPSSR >gi|299856447|gb|ADWV01000004.1| GENE 67 63569 - 64264 746 231 aa, chain + ## HITS:1 COG:ECs2516 KEGG:ns NR:ns ## COG: ECs2516 COG1214 # Protein_GI_number: 15831770 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 450 99.0 1e-127 MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQDILTTSGTSLTDINALA YGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGAWRKNGATRVLAAIDARMG EVYWAEYQRDENGIWHGEETEAVLKPELVHERMQQLSGEWVTVGTGWQAWPDLGKESGLV LRDGEVLLPAAEDMLPIACQIFAEGKTVAVEHAEPVYLRNNVAWKKLPGKE >gi|299856447|gb|ADWV01000004.1| GENE 68 64304 - 64885 606 193 aa, chain + ## HITS:1 COG:ECs2515 KEGG:ns NR:ns ## COG: ECs2515 COG3065 # Protein_GI_number: 15831769 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Starvation-inducible outer membrane lipoprotein # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 360 98.0 1e-99 MAVHKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRVMSAPQLYVGQEARFGG KVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVNGFLDPVDFRGQLVTVVGP ITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPIDPWFYGGRGWPYGYGGWGWY NPGPARVQTVVTE >gi|299856447|gb|ADWV01000004.1| GENE 69 65024 - 66775 1560 583 aa, chain + ## HITS:1 COG:fadD KEGG:ns NR:ns ## COG: fadD COG0318 # Protein_GI_number: 16129759 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli K12 # 23 583 1 561 561 1149 99.0 0 MLTACISFGVAMTTNTHFRGEELKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYAD QPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAG MIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLST AKGTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTT GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQ NLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQ QVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNE VPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMI LVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCR RQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA >gi|299856447|gb|ADWV01000004.1| GENE 70 66857 - 67972 1087 371 aa, chain + ## HITS:1 COG:ECs2513 KEGG:ns NR:ns ## COG: ECs2513 COG0349 # Protein_GI_number: 15831767 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Escherichia coli O157:H7 # 1 371 5 375 375 727 100.0 0 MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWS PLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEE YSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECR LMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHL WSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEEALPQPMLNLMDMPGYR KAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAE ALHNLLQEYPQ >gi|299856447|gb|ADWV01000004.1| GENE 71 68026 - 68991 552 321 aa, chain - ## HITS:1 COG:yeaX KEGG:ns NR:ns ## COG: yeaX COG1018 # Protein_GI_number: 16129757 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 1 321 1 321 321 646 99.0 0 MSDYQMFEVQVSQVEPLTEQVKRFTLVTTDGKPLPAFTGGSHIIVQMSDGDNQYSNAYSL LSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGDRLTISTPNNLFALIPSARKHLFIAG GIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELVQHPQAEKVHLHHSSTGTRLE LARLLADIEPGTHVYTCGPEALIEAVRSEAARLDIAADTLHFEQFAIEDKTGDAFTLVLA RSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCGTCETAILEGEADHRDQYFSDEERA SQQSMLICCSRAKGKRLVLDL >gi|299856447|gb|ADWV01000004.1| GENE 72 69047 - 70171 1244 374 aa, chain - ## HITS:1 COG:ECs2511 KEGG:ns NR:ns ## COG: ECs2511 COG4638 # Protein_GI_number: 15831765 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Escherichia coli O157:H7 # 1 374 1 374 374 796 99.0 0 MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANAN DYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDG NLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPNATSVEDQLPGLGAKVLEACP EVHDLKLAARFTTRTPANWKNIVDNYLECYHYGPAHPGFSDSVQVDRYWHTMHGNWTLQY GFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPIKGMMTVIYEFPVDSETTLQNYDIY FTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHG IAHFHNLLAQVFKD >gi|299856447|gb|ADWV01000004.1| GENE 73 70203 - 71813 1660 536 aa, chain - ## HITS:1 COG:ECs2510 KEGG:ns NR:ns ## COG: ECs2510 COG1292 # Protein_GI_number: 15831764 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli O157:H7 # 56 536 1 481 481 907 99.0 0 MMSNVKKKDVPLISISLVAILFIAAALSLFPQQSADAANAIYTFVTRTLGSAVQVLVLLA MGLVIYLATSKYGNIRLGEGKPEYSTLSWLFMFICAGLGSSTLYWGVAEWAYYYQTPGLN IAPRSQQALEFSVPYSFFHWGISAWATYTLASLIMAYHFHVRKNKGLSLSGIIAAITGVR PQGPWGKLVDLMFLIATVGALTISLVVTAATFTRGLSALTGLPDNFTVQAFVILLSGGIF CLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIVGPTEFITNSIINAIGLTTQNFLQMSLF TDPLGDGSFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLILGSTVGCWFFF GVMESYAIHQFINGVINVPQVLETLGGETAVQQVLMSLPAGKLFLAAYLGVMIIFLASHM DAVAYTMAATSTRNLQEGDDPDRGLRLFWCVVITLIPLSILFTGASLETMKTTVVLTALP FLVILLVKVGGFIRWLKQDYADIPAHQVEHYLPQTPVEALEKTPVLPAGTVFKGDN >gi|299856447|gb|ADWV01000004.1| GENE 74 72064 - 73149 988 361 aa, chain - ## HITS:1 COG:yeaU KEGG:ns NR:ns ## COG: yeaU COG0473 # Protein_GI_number: 16129754 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Escherichia coli K12 # 1 361 1 361 361 763 100.0 0 MMKTMRIAAIPGDGIGKEVLPEGIRVLQAAAERWGFALSFEQMEWASCEYYSHHGKMMPD DWHEQLSRFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQYVNLRPVRLFPGVPCPLA GKQPGDIDFYVVRENTEGEYSSLGGRVNEGTEHEVVIQESVFTRRGVDRILRYAFELAQS RPRKTLTSATKSNGLAISMPYWDERVEAMAENYPEIRWDKQHIDILCARFVMQPERFDVV VASNLFGDILSDLGPACTGTIGIAPSANLNPERTFPSLFEPVHGSAPDIYGKNIANPIAT IWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIAHGPKTPDMKGNATTPQVADAICKIIL R >gi|299856447|gb|ADWV01000004.1| GENE 75 73252 - 74175 862 307 aa, chain + ## HITS:1 COG:ECs2508 KEGG:ns NR:ns ## COG: ECs2508 COG0583 # Protein_GI_number: 15831762 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 307 8 314 314 624 99.0 1e-179 MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLEQTLNVVLLHRTTRRVT ITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISSFGFGRQVVAPALSALAKA YPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNYRILCASPEFIAQHGA PKHLTDLSALPCLVIKERDHPFGVWQLRNKEGHHAIKVTGPLSSNHGEIVHQWCLDGQGI ALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVSRLATSAKVRITVEFLRQHFAEHYP NFSLEHA >gi|299856447|gb|ADWV01000004.1| GENE 76 74302 - 74940 569 212 aa, chain + ## HITS:1 COG:ECs2507 KEGG:ns NR:ns ## COG: ECs2507 COG1280 # Protein_GI_number: 15831761 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 212 1 212 212 361 99.0 1e-100 MFAEYGVLNYWTYLVGAIFIVLVPGPNTLFVLKNSVSSGMKGGYLAACGVFIGDAVLMFL AWAGVATLIKTTPILFNIVRYLGAFYLLYLGSKILYATLKGKNNEAKSDEPQYGAIFKRA LILSLTNPKAILFYVSFFVQFIDVNAPHTGISFFILATTLELVSFCYLSFLIISGAFVTQ YIRTKKKLAKVGNSLIGLMFVGFAARLATLQS >gi|299856447|gb|ADWV01000004.1| GENE 77 75113 - 75472 383 119 aa, chain + ## HITS:1 COG:ECs2506 KEGG:ns NR:ns ## COG: ECs2506 COG3615 # Protein_GI_number: 15831760 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein/domain, possibly involved in tellurite resistance # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 243 100.0 6e-65 MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHS AEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK >gi|299856447|gb|ADWV01000004.1| GENE 78 75476 - 75664 268 62 aa, chain + ## HITS:1 COG:no KEGG:ECO103_1985 NR:ns ## KEGG: ECO103_1985 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 62 1 62 62 96 100.0 2e-19 MGKATYTVTVTNNSNGVSVDYETETPMTLLVPEVAAEVIKDLVNTVRSYPVRRKTPSFRA GI >gi|299856447|gb|ADWV01000004.1| GENE 79 76179 - 77327 293 382 aa, chain + ## HITS:1 COG:ECs5183 KEGG:ns NR:ns ## COG: ECs5183 COG0675 # Protein_GI_number: 15834437 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 721 97.0 0 MRRFAGACRFVFNRALARQNENHEAGNKYIPYGKMASWLVEWKNATETQWLKDSPSQPLQ QSLKDLERAYKNFFRKRAAFPRFKKRGQNDAFRYPQGVKLDQENSRIFLPKLGWMRYRNS RQVTGVVKNVTVSQSCGKWYISIQTESEVSTPVHPSASMIGLDAGVAKLATLSDGTVFGP VNSFQKNQKTLARLQRQLSRKVKFSNNWQKQKRKIQRLHSRIANIRRDYLHKVTTTVSKN HAMIVIEDLKVSNMSKSAAGTVSQPGRNVRAKSGLNRSILDQGWYEMRRQLEYKQLWSGG QVLAVPPAYTSQRCACCGHTAKENRLSQSKFRCQVCGYTANADVNGARNILAAGHAVLAC GGMVQSGRPLKQEPTEMIQATA >gi|299856447|gb|ADWV01000004.1| GENE 80 77367 - 78542 894 391 aa, chain - ## HITS:1 COG:ydcO KEGG:ns NR:ns ## COG: ydcO COG3135 # Protein_GI_number: 16129392 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in benzoate metabolism # Organism: Escherichia coli K12 # 1 391 88 478 478 633 99.0 0 MRLFSIPPPTLLAGFLAVLIGYASSAAIIWQAAIVAGATTAQISGWMTALGLAMGVSTLA LTLWYRVPVLTAWSTPGAALLVTGLQGLTLNEAIGVFIVTNALIVLCGITGLFARLMCII PHSLAAAMLAGILLRFGLQAFASLDGQFTLCGSMLLVWLATKAVAPRYAVIAAMIIGIVI VIAQGDVVTTDVVFKPVLPTYITPDFAFAHSLSVALPLFLVTMASQNAPGIAAMKAAGYS APVSPLIVFTGLLALVFSPFGVYSVGIAAITAAICQSPEAHPDKDQRWLAAAVAGIFYLL AGLFGSAITGMMAALPVSWIQMLAGLALLSTIGGSLYQALHNERERDAAVVAFLVTASGL TLVGIGSAFWGLIAGGVCYVVLNLIADRNRY >gi|299856447|gb|ADWV01000004.1| GENE 81 78634 - 79173 339 179 aa, chain + ## HITS:1 COG:ydcN KEGG:ns NR:ns ## COG: ydcN COG1396 # Protein_GI_number: 16129393 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 179 1 178 178 343 96.0 7e-95 MENLARFLSTTLKQLRQQSRLEYFRRLAEATGVSKAMLGQIERNESSPTVATLWKIATGL NVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS >gi|299856447|gb|ADWV01000004.1| GENE 82 79246 - 81207 1690 653 aa, chain + ## HITS:1 COG:ECs2039 KEGG:ns NR:ns ## COG: ECs2039 COG0826 # Protein_GI_number: 15831293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 653 15 667 667 1350 99.0 0 MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHR YGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCD IRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATIEFFIHGALCVAYSGQCYISH AQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTANLGALIDAGVRSFK IEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYF VNARKGDIGAFDSPKFIGLPVGEVLKVAKDHLDVAVTEPLANGDGLNVMIKREVVGFRAN TVEKTGENQYRVWPNEMPADLHKIRPHHPLNRNLDHDWQQALTKTSSERRVAVDIELGGW QEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQTLYYARDVQINLPG ALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAR EFYHRYGVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVN GDEVLTLKFDCRPCEMHVIGKIKNHILKMPLPGSVVASVSPDELLKTLPKRKG >gi|299856447|gb|ADWV01000004.1| GENE 83 81299 - 81529 220 76 aa, chain - ## HITS:1 COG:no KEGG:SSON_1702 NR:ns ## KEGG: SSON_1702 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 76 1 76 76 141 100.0 7e-33 MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEADSDELRAVAEESAEGLR EHFYWQKSRKPEAGQR >gi|299856447|gb|ADWV01000004.1| GENE 84 81952 - 82389 405 145 aa, chain + ## HITS:1 COG:ECs2042 KEGG:ns NR:ns ## COG: ECs2042 COG1598 # Protein_GI_number: 15831296 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 145 1 145 145 262 99.0 1e-70 MRGTVEIMRYPVTLTPAPEGGYMVSFVDIPEALTQGETVAEAMEAAKDALLTAFDFYFED NELIPLPSPLNSHDHFIEVPLSVASKVLLLNAFLQSEITQQELARRIGKPKQEITRLFNL HHATKIDAVQLAAKALGKELSLVMV >gi|299856447|gb|ADWV01000004.1| GENE 85 82468 - 83874 1093 468 aa, chain + ## HITS:1 COG:ydcR KEGG:ns NR:ns ## COG: ydcR COG1167 # Protein_GI_number: 16129398 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli K12 # 1 468 1 468 468 910 99.0 0 MKKYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESLGYIIARP QSGYYVAPQAIKMPKAPVIPVTRDEAVDINTYIFDMLQASRDPSVVPFASAFPDPRLFPL QQLNRSLAQVSKTATAMSVIENLPPGNAELRQAIARRYALQGITISPDEIVITAGALEAL NLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSVATDVKEGIDLQALELALQDYPV KACWLMTNSQNPLGFTLTPQKKAQLVALLNQYNVTLIEDDVYSELYFGREKPLPAKAWDR HDGVLHCSSFSKFLVPGFRIGWVAAGKHARKIQRLQLMSTLSTSSPMQLALVDYLSTRRY DAHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHSDSGYFLWLELPEPLDAGELSLAALT HHISIAPGKMFSTGENWSRFFRFNTAWQWGEREEQAVKQLGKLIQERL >gi|299856447|gb|ADWV01000004.1| GENE 86 84119 - 85264 1273 381 aa, chain + ## HITS:1 COG:ydcS KEGG:ns NR:ns ## COG: ydcS COG0687 # Protein_GI_number: 16129399 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 381 1 381 381 768 99.0 0 MSKTFARSSLCALTMTIMTAHAAEPPTNLDKPEGRLDIIAWPGYIERGQTDKQYDWVTQF EKETGCAVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKT LDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKG RVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRAQHSLIHRYWHDTT VQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAY KWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAE GGKFVPYSRWTQDYIAIMGGR >gi|299856447|gb|ADWV01000004.1| GENE 87 85282 - 86295 897 337 aa, chain + ## HITS:1 COG:ydcT KEGG:ns NR:ns ## COG: ydcT COG3842 # Protein_GI_number: 16129400 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli K12 # 1 337 1 337 337 670 100.0 0 MTYAVEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGA ISIFGKPASNLPPWERDVNTVFQDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEALE KVALGFVHQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKL QQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVGTSNV FDGLMAEKLCGMTGSFALRPEHIRLNTPGELQANGTIQAVQYQGAATRFELKLNGGEKLL VSQANMTGEELPATLTPGQQVMVSWSRDVMVPLVEER >gi|299856447|gb|ADWV01000004.1| GENE 88 86296 - 87237 964 313 aa, chain + ## HITS:1 COG:ECs2046 KEGG:ns NR:ns ## COG: ECs2046 COG1176 # Protein_GI_number: 15831300 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Escherichia coli O157:H7 # 1 313 1 313 313 506 99.0 1e-143 MAMNVLQSPSRPGLGKVSGFFWRNPGLGLFLLLLGPLMWFGIVYFGSLLTLLWQGFYTFD DFTMSVTPELTLANIRALFNPANYDIILRTLTMAVAVTIASAILAFPMAWYMARYTSGKM KAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHLGLEPLLTAFLTLPAVGGNTL STSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQASADLGARPRQTFRYVVLPLAIPG IAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQQGAIGNMPMAAAFTLVPIVLIALY LAFVKRLGAFDAL >gi|299856447|gb|ADWV01000004.1| GENE 89 87227 - 88021 752 264 aa, chain + ## HITS:1 COG:ECs2047 KEGG:ns NR:ns ## COG: ECs2047 COG1177 # Protein_GI_number: 15831301 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 422 100.0 1e-118 MHSERAPFFLKLAAWGGVVFLHFPILIIAAYAFNTEDAAFSFPPQGLTLRWFSVAAQRSD ILDAVTLSLKVAALATLMALVLGTLAAAALWRRDFFGKNAISLLLLLPIALPGIVTGLAL LTAFKTINLEPGFFTIVVGHATFCVVVVFNNVIARFRRTSWSLVEASMDLGANGWQTFRY VVLPNLSSALLAGGMLAFALSFDEIIVTTFTAGHERTLPLWLLNQLGRPRDVPVTNVVAL LVMLVTTLPILGAWWLTREGDNGQ >gi|299856447|gb|ADWV01000004.1| GENE 90 88043 - 89467 1302 474 aa, chain + ## HITS:1 COG:ydcW KEGG:ns NR:ns ## COG: ydcW COG1012 # Protein_GI_number: 16129403 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 474 1 474 474 927 99.0 0 MQHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTP KVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNG LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLT ALKLAELAKDIFPAGVINVLFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSI KRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKL GAAVATLKSGAPDDESTELGPLSSLAHLERVSKAVEEAKATGHIKVITGGEKRKGNGYYY APTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHR VSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVKH >gi|299856447|gb|ADWV01000004.1| GENE 91 89998 - 90486 142 162 aa, chain + ## HITS:1 COG:AGc2119 KEGG:ns NR:ns ## COG: AGc2119 COG0110 # Protein_GI_number: 15888483 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 120 78 190 210 108 43.0 3e-24 MGGNHPLNRFTTHMMTYNGEFDKFAMSEFERSWTLKPFITKPENPIIGNDVWIGNDVVLK GGIAIGDGAVIAANSVVTKDVPPYAIVAGVPAKIIRFRFDSNVIDELLRIKWWNYNYSDL PDNNKCDDINYFVEEMNRLISDGNIQERDYKKFNLSEVFRGL >gi|299856447|gb|ADWV01000004.1| GENE 92 91130 - 91351 135 73 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_1442 NR:ns ## KEGG: ECIAI1_1442 # Name: ydcX # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 73 10 82 82 117 100.0 1e-25 MTHICARFIHLAGRPYMSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATW PMSFPVALLFSLF >gi|299856447|gb|ADWV01000004.1| GENE 93 91437 - 91670 379 77 aa, chain + ## HITS:1 COG:no KEGG:G2583_1807 NR:ns ## KEGG: G2583_1807 # Name: ydcY # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 77 1 77 77 112 100.0 5e-24 MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQQQRLRTAIAHHGRKHK EDMEARHEQLTKGGTIL >gi|299856447|gb|ADWV01000004.1| GENE 94 91671 - 92120 399 149 aa, chain - ## HITS:1 COG:ydcZ KEGG:ns NR:ns ## COG: ydcZ COG3238 # Protein_GI_number: 16129406 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 149 1 149 149 222 100.0 2e-58 MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLVGIVLFVSILWFKQGMA GFGELVSSVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAVLVASQLIGGLMLDIFRSH GVPLRALFGPICGAILLVVGAWLVARRSF >gi|299856447|gb|ADWV01000004.1| GENE 95 92117 - 92635 537 172 aa, chain - ## HITS:1 COG:ECs2052 KEGG:ns NR:ns ## COG: ECs2052 COG1247 # Protein_GI_number: 15831306 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Escherichia coli O157:H7 # 1 172 1 172 172 353 99.0 1e-97 MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTIAGYPVLVSEEDS VVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLSRLIDEARDCGKHVMVAGI ESQNQASLHLHQSLGFVVTAQMPQVGTKFGRWLDLTFMQLQLDERTEPDAIG >gi|299856447|gb|ADWV01000004.1| GENE 96 92819 - 93856 1018 345 aa, chain + ## HITS:1 COG:yncB KEGG:ns NR:ns ## COG: yncB COG2130 # Protein_GI_number: 16129408 # Func_class: R General function prediction only # Function: Putative NADP-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 345 32 376 376 695 97.0 0 MGQQKQRNRRWVLASRPHGAPVPENFRLEEDDVATPGEGQVLLRTVYLSLDPYMRGRMSD EPSYSPPVDIGGVMVGGTVSRVVESNHPDYQPGDWVLGYSGWQDYDISSGDDLVKLGDHP QNPSWSLGVLGMLGFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVVGV AGGAEKCRHAIEVLGFDVCLDHHADDFAEQLVKACPKGIDIYYENVGGKVFDAVLPLLNT SARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYGHRIHEFQKEMG QWVKEDKIHYHEDITDGLENAPQTFIGLLKGKNFGKVVIRVAGDD >gi|299856447|gb|ADWV01000004.1| GENE 97 94054 - 94719 629 221 aa, chain + ## HITS:1 COG:yncC KEGG:ns NR:ns ## COG: yncC COG1802 # Protein_GI_number: 16129409 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 221 20 240 240 402 99.0 1e-112 MPGMGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVS VNALSVAPAQAFTVPEVGKRQLDEINRIRYELELMAVALAVENLTPQDLAELQELLEKLQ QAQEKGDMEQIINVNRLFRLAIYHRSNMPILCEMIEQLWVRMGPGLHYLYEAINPAELRE HIENYHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQYNR >gi|299856447|gb|ADWV01000004.1| GENE 98 94755 - 96857 1711 700 aa, chain - ## HITS:1 COG:yncD KEGG:ns NR:ns ## COG: yncD COG1629 # Protein_GI_number: 16129410 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli K12 # 1 700 1 700 700 1373 99.0 0 MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATP RINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVDGIPATMPDGQG QTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYG LKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFN SVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIKQTQAGLRYERSLSAQDDMSVMMY AGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYEN MSENRKGYNNFRLNSGMPEYGQKGELRRDERNLMWNIDPYLQTQWQLSEKLSLDAGVRYS SVWFDSNDHYVTPGNGDESGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELS YRADGQSGMNFGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRTTYK NAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFA SIGYVPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVD NLFDKEYVGSVIVNESNGRYYEPSPGRNYGVGMNIAWRFE >gi|299856447|gb|ADWV01000004.1| GENE 99 97099 - 98160 1284 353 aa, chain + ## HITS:1 COG:ECs2056 KEGG:ns NR:ns ## COG: ECs2056 COG3391 # Protein_GI_number: 15831310 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 353 1 353 353 622 99.0 1e-178 MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATS QSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGENIKLKTAI QNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVID AKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL >gi|299856447|gb|ADWV01000004.1| GENE 100 98275 - 99774 1548 499 aa, chain - ## HITS:1 COG:ECs2057 KEGG:ns NR:ns ## COG: ECs2057 COG1113 # Protein_GI_number: 15831311 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 499 18 516 516 917 99.0 0 MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAG PALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAM TGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLA IVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVG TAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGV PYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFMAKMSRQHVPYAGILATL VVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKQGKAADVSFKLP GAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIAALPIIGILLVIGWFGVRKRVAEIHSTAP VVEEDEEKQEIVFKPETAS >gi|299856447|gb|ADWV01000004.1| GENE 101 100041 - 100658 494 205 aa, chain + ## HITS:1 COG:ECs2058 KEGG:ns NR:ns ## COG: ECs2058 COG0625 # Protein_GI_number: 15831312 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 412 97.0 1e-115 MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGASRELLKTLNPLCQVPTLALEN DEIMTETAAIALMVLDRRPDLAPPVGRAERQQFQRLLVWLVANVYPTFTFADYPERWASD APEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDCYLCTMRTWGPGHEWFQDNAQ NISAIADAVCQLPKLQEVLKRNEII >gi|299856447|gb|ADWV01000004.1| GENE 102 100734 - 100946 109 70 aa, chain + ## HITS:1 COG:no KEGG:ECO103_1586 NR:ns ## KEGG: ECO103_1586 # Name: yncH # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 70 1 70 70 108 98.0 4e-23 MLCFLIYITLPFIQLVYFISSEKKLTIHIVQMFHLLSQVFYNLKKFLMMDMLGVGDAINI NTNKNIRQVC >gi|299856447|gb|ADWV01000004.1| GENE 103 101847 - 104204 1349 785 aa, chain + ## HITS:1 COG:Z0268 KEGG:ns NR:ns ## COG: Z0268 COG3209 # Protein_GI_number: 15799917 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 EDL933 # 1 635 633 1264 1404 1189 93.0 0 MSVTEGGLTRSMGYDAAGRITVLTNENGSQSTFRYDPVDRLTEQRGFDGRTQRYHYDLTG KLTQSEDEGLITLWHYDASDRITHRTVNGDPAEQWQYDEHGWLTTLSHTCEGHRVSVHYG YDDKGRLTGERQTVENPETGEMLWEHETGHAYSEQGLATRQEPDGLPPVEWLTYGSGYLA GMKLGGTPLVEYTRDRLHRETARSFGGAGSTAGYEQATAYTLTGQLQSRHLNLPQLDCDY TWNDNGQLVRISGPQECREYRYSGTGRLTGVHTTAANLDIDIPYATDPAGNRLPDPELHP DSTLTAWPDNRIAEDAHYVYRYDEYGRLAEKTDRIPEGVIRMHDERTHHYHYDSQHRLVF YTRIQHGEPQVESRYLYDPLGRRTGKRVWRRERDLTGWMSLSRKPEETWYGWDGDRLTTV QTQQTRIQTVYQPGSFTPLLRIETENGEQAKARHRSLAEVLQEDTGVTLPAELAVMLGRL ERELRQGSVSEESQQWLAQCGLTAEQMAAQLEAEYIPERKLHLYHCDHRGLPLALISPEG ETAWQGEYDEWGNLLGEESAQHLQQSLRLPGQQYDEESGLYYNRNRYYDPLQGRYITQDP IGLRGEWNLYKYPLNPVQFIDSLGLKFHVNGDPSDFNQAVEYLKQDSQMKETIDFLSSSE ETINIEYIEGTNVRFNSNNMAIYWNSRASLFCSTELNSKSQSPALGLGHEFAHAQYYLLD KENFMALLSRTDKKYENKEEARVITIIESRAAKTLGECTRGAHSGLPFYRVDGPLQTMKI TGTPE >gi|299856447|gb|ADWV01000004.1| GENE 104 104219 - 104665 264 148 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1590 NR:ns ## KEGG: EC55989_1590 # Name: not_defined # Def: conserved hypothetical protein; putative exported protein # Organism: E.coli_55989 # Pathway: not_defined # 1 148 6 153 153 280 100.0 9e-75 MKYLMVLLSLFSGSVLGMGRVNELCGIDSVKTIEIINLPSYVTTLVPLSKEGLNEIYRYK VVVNEISDLYAGKIIDLLQMKYFRKEKYNNIRWGVSIISKGNNKCEIYFDAFGECGSVNG INVCFEKNEMIGWIKKEIPLLSQKIGGL >gi|299856447|gb|ADWV01000004.1| GENE 105 105328 - 105687 274 119 aa, chain + ## HITS:1 COG:ydcC KEGG:ns NR:ns ## COG: ydcC COG5433 # Protein_GI_number: 16129419 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 119 135 253 378 237 96.0 4e-63 MHSLVIGQIKTDKKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFA VKGNQGRLNKAFEEKFPLKELNNPKHDSYAISEKSHGREETRLHIVCDVPDELIDFTFE >gi|299856447|gb|ADWV01000004.1| GENE 106 105835 - 106344 374 169 aa, chain + ## HITS:1 COG:ybgA KEGG:ns NR:ns ## COG: ybgA COG3272 # Protein_GI_number: 16128682 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 169 1 169 169 310 97.0 7e-85 MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVA DIHQWQNLDDFYNQYYQRVIVLLSHPANPRDHTNVLMHVQGYFRPHIDSTERQQLAALID SYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRVINLRHSGVL >gi|299856447|gb|ADWV01000004.1| GENE 107 106341 - 107759 913 472 aa, chain + ## HITS:1 COG:phrB KEGG:ns NR:ns ## COG: phrB COG0415 # Protein_GI_number: 16128683 # Func_class: L Replication, recombination and repair # Function: Deoxyribodipyrimidine photolyase # Organism: Escherichia coli K12 # 1 471 1 471 472 945 96.0 0 MITHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLN GLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERA LRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGS IEPAPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSA SLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSELIWREFYRHLMTYYPSLCKHRPFIA WTDRVQWQSNPAHLQAWQKGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDW REGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPITQGEKFDREGEFIRRWL PELRDVPGKAVHEPWKWAQKAGVKLDYPQPIVDHKEARLRTLAAYEEARKGA >gi|299856447|gb|ADWV01000004.1| GENE 108 107801 - 109282 1805 493 aa, chain - ## HITS:1 COG:ybgH KEGG:ns NR:ns ## COG: ybgH COG3104 # Protein_GI_number: 16128684 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli K12 # 1 493 1 493 493 920 99.0 0 MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYNDTHAYELFSAYCSLVYV TPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSN VSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIA GLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYAL IVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVN RDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFC ILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYML LSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALACVGLVLMIWLYQ ALKFRNRALALES >gi|299856447|gb|ADWV01000004.1| GENE 109 109553 - 110296 813 247 aa, chain + ## HITS:1 COG:ECs0735 KEGG:ns NR:ns ## COG: ECs0735 COG0327 # Protein_GI_number: 15829989 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 247 1 247 247 496 99.0 1e-140 MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLVADAV IVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITV MGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFID SAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTF IDIPNPA >gi|299856447|gb|ADWV01000004.1| GENE 110 110319 - 110975 656 218 aa, chain + ## HITS:1 COG:ECs0736 KEGG:ns NR:ns ## COG: ECs0736 COG2049 # Protein_GI_number: 15829990 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Escherichia coli O157:H7 # 1 218 1 218 218 417 100.0 1e-117 MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVVEAIPGMNNITVILRNP ESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDLAVVAAHCGLSEKQVVELH SSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPAGSVGIGGPQTGVYPLATPGG WQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC >gi|299856447|gb|ADWV01000004.1| GENE 111 110969 - 111901 956 310 aa, chain + ## HITS:1 COG:ECs0737 KEGG:ns NR:ns ## COG: ECs0737 COG1984 # Protein_GI_number: 15829991 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 635 100.0 0 MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLVGNDANAPALEITLGQL TVEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTLKRPQHGMRSYLAVAGGID VPPVMGSCSTDLKVGIGGLEGRLLKDGDRLPIGKAKRDFMEAQGVKQLLWGNRIRALPGP EYHEFDRASQDAFWRSPWQLSSQSNRMGYRLQGQILKRTTDRELLSHGLLPGVVQVPHNG QPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCSLEEALKARQDQQRYFE QLAWRLHNEN >gi|299856447|gb|ADWV01000004.1| GENE 112 111891 - 112625 699 244 aa, chain + ## HITS:1 COG:ECs0738 KEGG:ns NR:ns ## COG: ECs0738 COG1540 # Protein_GI_number: 15829992 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Escherichia coli O157:H7 # 1 244 1 244 244 438 96.0 1e-123 MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACVREAIKNGVAIGAHPSF PDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRHVKPHGMLYNQAAKEAQLA DAIARAVYACDPALILVGLAGSELIRAGKQYGLTTREEVFADRGYQADGSLVPRSQPGAL IENEEQALAQTLEMVQHGRVKSITGEWATVTAQTVCLHGDGEHALAFARRLRSTFAEKEI VVAA >gi|299856447|gb|ADWV01000004.1| GENE 113 112661 - 113452 588 263 aa, chain + ## HITS:1 COG:ECs0739 KEGG:ns NR:ns ## COG: ECs0739 COG0266 # Protein_GI_number: 15829993 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 541 98.0 1e-154 MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQHVTHVETRGKALLTHFS NDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTILLYSASDIEMLRPEQLTTH PFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGLGNYLRVEILWQVG LTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDENKHHGALFRFKVFHRDGELCER CGGIIEKTTLSSRPFYWCPGCQH >gi|299856447|gb|ADWV01000004.1| GENE 114 113449 - 114495 954 348 aa, chain - ## HITS:1 COG:abrB KEGG:ns NR:ns ## COG: abrB COG3180 # Protein_GI_number: 16128690 # Func_class: R General function prediction only # Function: Putative ammonia monooxygenase # Organism: Escherichia coli K12 # 1 348 16 363 363 526 98.0 1e-149 MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAI LGCMIAQNLTGSILTTLAANWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPG GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQQIVWFPPVS INLLLTILLAVVAGTAGCMLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIG WRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGL DTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA >gi|299856447|gb|ADWV01000004.1| GENE 115 114647 - 115708 802 353 aa, chain - ## HITS:1 COG:no KEGG:SSON_0667 NR:ns ## KEGG: SSON_0667 # Name: ybgO # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 353 11 363 363 726 99.0 0 MSAGKGVLLVICLLFLPLKSALALNCYFGSSGGSVEKSEAIQPFAVPGNAKLGDKIWESD DIKIPVYCDNNTNGNFESEHVYAWVNPYPGVQDRYYQLGVTYNGVDYDANQGKSRIDTNQ CIDSKNIDIYTPEQIIAMGWQNKICSGDPANIHMSRTFLARMRLYVKIREMPPHDYQSTL SDYIVVQFDGAGSVNEDPTAQNLKYHITGLENIRVLDCSVNFSISPETQVIDFGKFNLLD IRRHTMSKTFSIKTTKSQNDQCTDGFKVSSSFYTEETLVEEDKALLIGNGLKLRLLDENA SPYTFNKYAEYADFTSDMLIYEKTYTAELSSIAGTPIEAGPFDTVVLFKINYN >gi|299856447|gb|ADWV01000004.1| GENE 116 115705 - 116436 606 243 aa, chain - ## HITS:1 COG:ybgP KEGG:ns NR:ns ## COG: ybgP COG3121 # Protein_GI_number: 16128692 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 242 1 242 242 446 90.0 1e-125 MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENE KGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTTKLPGDRETLFFYNMREIPPAPEKNS DHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGR NEKGVLPGFKTVMVAPFSTVNTNTGNYSGSQFYLGYMDDYGALRMTTLNCSGQCHLQAVE AKK >gi|299856447|gb|ADWV01000004.1| GENE 117 116451 - 118910 1463 819 aa, chain - ## HITS:1 COG:ybgQ KEGG:ns NR:ns ## COG: ybgQ COG3188 # Protein_GI_number: 16128693 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 819 1 818 818 1514 95.0 0 MDTVNIYRLSFVSCLVVAMPCALAVEFNLNVLDKSMRDRIDISLLKEKGVIAPGEYFVSV AVNNNQISNGQKINWHKNDDKTIPCINDLLVDKFGLKPEVRQSLPLINQCVDFSSRPEML FNFDQANQQLNITIPQAWLAWHSENWTPPSTWKEGVAGVLMDYNLFASSYRPQDGSSSTN LNAYGTAGINTGAWRLRSDYQLNQTDSDDNHEQSGEISRTYLFRPLPQLGSKLTLGETDF SSNIFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQTNATVTISQSGRVIYQKKVPPG PFIIDDLNQSVQGTLDVKVTEEDGRVNNFQVSAASTPFLTRQGQVRYKLAAGQPRPSMSH QTENETFFSNEVSWGMLSNTSLYGGLLLSGDDYHSAAIGIGQNMLWLGALSFDVTWASSH FDTQQDERGLSYRFNYSKQVDATNSTISLAAYRFSDRHFHSYANYLDHKYNDSDAQDEKQ TISLSVGQPITPLNLNLYANLLHQTWWNADASTTANITAGFNVDIGDWRDISISTSFNTT HYEDKDRDNQIYLSISLPFGNGGRVGYDMQNSSHSTTHRMSWNDTLDERNSWGMSAGLQS DRPDNGAQVSGNYQHLSSAGEWDISGTYAANDYSSVSSSWSGSFTATQYGAAFHRRSSTN EPRLMVSTDGVADIPVQGNLDYTNHFGIAVVPLISSYQPSTVAVNMNDLPDGVTVAENVI KETWIEGAIGYKSLASRSGKDVNVIIRNASGQFPPLGADIRQDDSGISVGMVGEEGHAWL SGVAENQKFTVVWGDSQHCSLHLPEHMEDTANRLILPCH >gi|299856447|gb|ADWV01000004.1| GENE 118 118961 - 119527 569 188 aa, chain - ## HITS:1 COG:ybgD KEGG:ns NR:ns ## COG: ybgD COG3539 # Protein_GI_number: 16128694 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 188 1 188 188 283 79.0 1e-76 MFKGQKTLAALAVSLLFTAPVYAADEGSGEIHFKGEVIEAPCEIHQDDIDKEVELGQVTT SHINQSHHSDAVAVDLRLVNCDLENSSNGSGGKISKVAVTFDSSAKTTGADPILNNTSTG EATGVGVRLMNKDQSNIVLGTATPDIDLAPTSSEQTLNFFAWMEQIDQATPVTPGAVTAN ATYVLDYK >gi|299856447|gb|ADWV01000004.1| GENE 119 119918 - 121201 1437 427 aa, chain - ## HITS:1 COG:gltA KEGG:ns NR:ns ## COG: gltA COG0372 # Protein_GI_number: 16128695 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Escherichia coli K12 # 1 427 1 427 427 901 100.0 0 MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFI DGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITR LFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYS IGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVR TAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFVRRAKDKNDSFR LMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYP NVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDGMKIARPRQLYTGYEKRD FKSDIKR >gi|299856447|gb|ADWV01000004.1| GENE 120 121189 - 121374 71 61 aa, chain + ## HITS:1 COG:no KEGG:ECSE_0779 NR:ns ## KEGG: ECSE_0779 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 61 3 63 63 120 98.0 1e-26 MYQPFKVSLAPYYVRLPELKFAFAHQPGFTRLLFGSPLCERGENLGTELWALAGKGSIDD E >gi|299856447|gb|ADWV01000004.1| GENE 121 121407 - 121514 64 35 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0704 NR:ns ## KEGG: EC55989_0704 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 35 18 52 52 65 100.0 5e-10 MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV >gi|299856447|gb|ADWV01000004.1| GENE 122 121895 - 122299 289 134 aa, chain + ## HITS:1 COG:ECs0746 KEGG:ns NR:ns ## COG: ECs0746 COG2009 # Protein_GI_number: 15830000 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Escherichia coli O157:H7 # 6 134 1 129 129 220 100.0 4e-58 MWALFMIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSP EGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFV ITVVLSLLAGVLVW >gi|299856447|gb|ADWV01000004.1| GENE 123 122293 - 122640 531 115 aa, chain + ## HITS:1 COG:ECs0747 KEGG:ns NR:ns ## COG: ECs0747 COG2142 # Protein_GI_number: 15830001 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase, hydrophobic anchor subunit # Organism: Escherichia coli O157:H7 # 1 115 1 115 115 148 99.0 3e-36 MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVF TLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV >gi|299856447|gb|ADWV01000004.1| GENE 124 122640 - 124406 2242 588 aa, chain + ## HITS:1 COG:ECs0748 KEGG:ns NR:ns ## COG: ECs0748 COG1053 # Protein_GI_number: 15830002 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 1153 100.0 0 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFG GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGC TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI PTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQ ESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAM AKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAH SRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY >gi|299856447|gb|ADWV01000004.1| GENE 125 124422 - 125138 686 238 aa, chain + ## HITS:1 COG:ECs0749 KEGG:ns NR:ns ## COG: ECs0749 COG0479 # Protein_GI_number: 15830003 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 495 100.0 1e-140 MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVC GSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPY LLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYR FLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA >gi|299856447|gb|ADWV01000004.1| GENE 126 125339 - 128140 2805 933 aa, chain + ## HITS:1 COG:ECs0751 KEGG:ns NR:ns ## COG: ECs0751 COG0567 # Protein_GI_number: 15830005 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Escherichia coli O157:H7 # 1 933 1 933 933 1944 100.0 0 MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHS QTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKV ADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEE KRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLK EMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMG FSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAV TGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIF HVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKH PTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHE WDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLA YATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLS EEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPH GYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKS LLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDV AIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLR YAGRPASASPAVGYMSVHQKQQQDLVNDALNVE >gi|299856447|gb|ADWV01000004.1| GENE 127 128155 - 129372 1713 405 aa, chain + ## HITS:1 COG:STM0737 KEGG:ns NR:ns ## COG: STM0737 COG0508 # Protein_GI_number: 16764107 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Salmonella typhimurium LT2 # 1 405 1 402 402 718 96.0 0 MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAV LEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRR LLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAADPAAQPALAARSEKRVP MTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVK AVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIK ELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNG QVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV >gi|299856447|gb|ADWV01000004.1| GENE 128 129466 - 130632 1470 388 aa, chain + ## HITS:1 COG:ECs0753 KEGG:ns NR:ns ## COG: ECs0753 COG0045 # Protein_GI_number: 15830007 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Escherichia coli O157:H7 # 1 388 1 388 388 728 100.0 0 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGV KVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRR VVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKI FMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDP REAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTE AFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKK LADSGLNIIAAKGLTDAAQQVVAAVEGK >gi|299856447|gb|ADWV01000004.1| GENE 129 130632 - 131501 1075 289 aa, chain + ## HITS:1 COG:ECs0754 KEGG:ns NR:ns ## COG: ECs0754 COG0074 # Protein_GI_number: 15830008 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 508 100.0 1e-144 MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREA VAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMI GPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGG DPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAP KGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK >gi|299856447|gb|ADWV01000004.1| GENE 130 131605 - 132327 736 240 aa, chain - ## HITS:1 COG:farR KEGG:ns NR:ns ## COG: farR COG2188 # Protein_GI_number: 16128705 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 240 1 240 240 440 99.0 1e-123 MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILE SIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIFEVIPADDFLQQQLQITAQ DRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEI IPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEYSRNAFNTDDYKFTLIAQRKSSR >gi|299856447|gb|ADWV01000004.1| GENE 131 132496 - 134412 1927 638 aa, chain + ## HITS:1 COG:hrsA_3 KEGG:ns NR:ns ## COG: hrsA_3 COG1299 # Protein_GI_number: 16128706 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 279 638 1 360 360 640 99.0 0 MNLTTLTHRDALCLNARFTSREEAIHALTQRLAALGKISSTEQFLEEVYRRESLGPTALG EGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTTHMQLLT ALTTRLADDEIRARIQSATTPDELLSALDDKGDTQPSASFSNAPTIVCVTACPAGIAHTY MAAEYLEKAGRKLGVNVYVEKQGANGIEGRLTADQLNSATACIFAAEVAIKESERFNGIP ALSVRVAEPIRHAEALMQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPL IVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMYRKLGGGLLGILMVPVLAAYTAYSLAD KPALAPGFAAGLAANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVL GTLGAGSLMLFVVGEPVAWINNSLTAWLNGLSGSNALLLGAILGFMCSFDLGGPVNKAAY AFCLGAMANGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGIT EGAIPMAIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAA IGWFGAALVGAAISTAILLIWRRHAVKHGNYLTDGVMP >gi|299856447|gb|ADWV01000004.1| GENE 132 134430 - 137063 1752 877 aa, chain + ## HITS:1 COG:ybgG KEGG:ns NR:ns ## COG: ybgG COG0383 # Protein_GI_number: 16128707 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Escherichia coli K12 # 1 877 1 877 877 1788 97.0 0 MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILE DYFAVKPENKDRVKKQVEAGKLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMK IGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDKTEFLWQSSDGSEVTAQVLPL GYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMEKLREI YPQRKFVMSRFEEVFEQIEAQRESLATLKGEFIDGKYMRVHRTIGSTRMDIKIAHARIEN KIVNLLEPLATLAWTLGFEYHHGLLEKMWKEILKNHAHDSIGCCCSDKVHREIVARFELA EDMADNLLRFYMRKIADNMPQSDADKLVLFNLMPWPREEVINTTVRLRASQFNLRDDRGQ PVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQINQIVPSMGYRTLYIEANQPGNVI AAKSDAEGILENAFWQIALNEDGTLQLVDKDSGVRYDRVLQIEESSDDGDEYDYSPAKEE WVMTSATAKPQCEITHEAWQSRAVIRYDMAVPLNLLERSVRQSTGRVGVEMVVTLSHNSR RIDVDINLDNQADDHRLRVLIPTSFNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAP VPVWNMLNYAALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLFLRPG RPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKL NKAGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVIS CSETMMDEHITTEENQGSNLSGPFLPGQSRTFSYRLA >gi|299856447|gb|ADWV01000004.1| GENE 133 137088 - 137315 98 75 aa, chain + ## HITS:1 COG:no KEGG:SSON_0684 NR:ns ## KEGG: SSON_0684 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 75 1 75 75 144 100.0 7e-34 MRGQIVDKGRFVHAGYGMNALFGLQKQANSIYCRDDVDTGKRSASGNFAFIFTLKPRICG FIFNKIITLGELIII >gi|299856447|gb|ADWV01000004.1| GENE 134 137910 - 139478 1871 522 aa, chain + ## HITS:1 COG:ECs0768 KEGG:ns NR:ns ## COG: ECs0768 COG1271 # Protein_GI_number: 15830022 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Escherichia coli O157:H7 # 1 522 2 523 523 1011 100.0 0 MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV DTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRY TPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKK WLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICG LYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR >gi|299856447|gb|ADWV01000004.1| GENE 135 139494 - 140633 1490 379 aa, chain + ## HITS:1 COG:ECs0769 KEGG:ns NR:ns ## COG: ECs0769 COG1294 # Protein_GI_number: 15830023 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Escherichia coli O157:H7 # 1 379 1 379 379 699 100.0 0 MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGN QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWD WGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMI ITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAA SNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLA CIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYW KMFGRITKEDIERNTHSLY >gi|299856447|gb|ADWV01000004.1| GENE 136 140648 - 140761 148 37 aa, chain + ## HITS:1 COG:STM0742 KEGG:ns NR:ns ## COG: STM0742 COG4890 # Protein_GI_number: 16764112 # Func_class: S Function unknown # Function: Predicted outer membrane lipoprotein # Organism: Salmonella typhimurium LT2 # 1 36 1 36 37 57 86.0 5e-09 MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI >gi|299856447|gb|ADWV01000004.1| GENE 137 140761 - 141054 197 97 aa, chain + ## HITS:1 COG:ECs0770 KEGG:ns NR:ns ## COG: ECs0770 COG3790 # Protein_GI_number: 15830024 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 97 1 97 97 169 100.0 1e-42 MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCA GVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF >gi|299856447|gb|ADWV01000004.1| GENE 138 141318 - 141608 233 96 aa, chain + ## HITS:1 COG:ECs0771 KEGG:ns NR:ns ## COG: ECs0771 COG0824 # Protein_GI_number: 15830025 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Escherichia coli O157:H7 # 1 96 39 134 134 177 100.0 3e-45 MLRHHHFSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVN AENTLLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ >gi|299856447|gb|ADWV01000004.1| GENE 139 141605 - 142297 751 230 aa, chain + ## HITS:1 COG:ECs0772 KEGG:ns NR:ns ## COG: ECs0772 COG0811 # Protein_GI_number: 15830026 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Escherichia coli O157:H7 # 1 230 1 230 230 419 100.0 1e-117 MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGI ELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNREL ENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAI GLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTVSESNKG >gi|299856447|gb|ADWV01000004.1| GENE 140 142301 - 142729 462 142 aa, chain + ## HITS:1 COG:ECs0773 KEGG:ns NR:ns ## COG: ECs0773 COG0848 # Protein_GI_number: 15830027 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Escherichia coli O157:H7 # 11 142 11 142 142 207 100.0 4e-54 MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSND NPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEI IKALNLLHSAGVKSVGLMTQPI >gi|299856447|gb|ADWV01000004.1| GENE 141 142794 - 143372 362 192 aa, chain + ## HITS:1 COG:ECs0774 KEGG:ns NR:ns ## COG: ECs0774 COG3064 # Protein_GI_number: 15830028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane protein involved in colicin uptake # Organism: Escherichia coli O157:H7 # 1 133 1 133 394 150 100.0 2e-36 MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGGGGGSSIDAVMVDSGAV VEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQERLKQLEKERLAAQEQKKQA EEAAKQAELKQKQAEEAAAKAAADAKAKAEADAKAAEEAAKKAAADAKKKQKQKPPKPQP KRRKKPRQPLRH >gi|299856447|gb|ADWV01000004.1| GENE 142 144191 - 145483 1385 430 aa, chain + ## HITS:1 COG:ECs0775 KEGG:ns NR:ns ## COG: ECs0775 COG0823 # Protein_GI_number: 15830029 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic component of the Tol biopolymer transport system # Organism: Escherichia coli O157:H7 # 1 430 1 430 430 820 100.0 0 MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAA DLRNSGKFNPLDRARLPQQPGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVD TGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPY ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQ NLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAK QDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQ VKFPAWSPYL >gi|299856447|gb|ADWV01000004.1| GENE 143 145518 - 146039 660 173 aa, chain + ## HITS:1 COG:ECs0776 KEGG:ns NR:ns ## COG: ECs0776 COG2885 # Protein_GI_number: 15830030 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 296 100.0 2e-80 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNMSSEEQARL QMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVY >gi|299856447|gb|ADWV01000004.1| GENE 144 146049 - 146840 521 263 aa, chain + ## HITS:1 COG:ECs0777 KEGG:ns NR:ns ## COG: ECs0777 COG1729 # Protein_GI_number: 15830031 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 393 99.0 1e-109 MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQLERISNAHSQLLTQLQ QQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSGGAAAQSTSSDQSGAAA STTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLP NANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVY QQVISKYPGTDGAKQAQKRLNAM >gi|299856447|gb|ADWV01000004.1| GENE 145 148153 - 149187 648 344 aa, chain + ## HITS:1 COG:nadA KEGG:ns NR:ns ## COG: nadA COG0379 # Protein_GI_number: 16128718 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Escherichia coli K12 # 1 344 4 347 347 692 99.0 0 MFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVMVAHYYTDPEIQQLAEETGG CISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEKTILMPTLQAECSLDLGCPVEE FNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAVELIDHLDSLGEKIIWAPDKHLGR YVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEYPDAAILVHPESPQAIVDMADAVGST SQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPDKELLEAPTAGEGATCRSCAHCPWMAMN GLQSIAEALEQEGSNHEVHVDERLRERALVPLNRMLDFAATLRG >gi|299856447|gb|ADWV01000004.1| GENE 146 149240 - 149944 601 234 aa, chain + ## HITS:1 COG:pnuC KEGG:ns NR:ns ## COG: pnuC COG3201 # Protein_GI_number: 16128719 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Escherichia coli K12 # 1 234 6 239 239 391 99.0 1e-109 MQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEKISNYFFGLINVTLFGIIFFQI QLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIRWLPLPKALSWLAVCVVSIGLMTV FINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFPFWDSCMMVLSIVAMILMTRKYVENW LLWVIINVISVVIFALQGVYAMSLEYIILTFIALNGSRMWINSARERGSRALSH >gi|299856447|gb|ADWV01000004.1| GENE 147 149941 - 150882 734 313 aa, chain - ## HITS:1 COG:ZybgR KEGG:ns NR:ns ## COG: ZybgR COG1230 # Protein_GI_number: 15800461 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Escherichia coli O157:H7 EDL933 # 4 307 2 305 311 527 99.0 1e-149 MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGSLALLADAGHMLTDTAA LLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVITILIVWEAIERFRTPRPVE GGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIWT GWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPVSLDIAELKRRMCREIPEVRNVH HVHVWMVGEKPVMTLHVQVIPPHEHDALLDQIQHYLMDHYQIEHATIQMEYQPCHGPDCH LNEGVSGHSHHHH >gi|299856447|gb|ADWV01000004.1| GENE 148 150996 - 151376 339 126 aa, chain - ## HITS:1 COG:no KEGG:B21_00695 NR:ns ## KEGG: B21_00695 # Name: ybgS # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 126 1 126 126 146 100.0 2e-34 MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQVAPDARENVAPNNVDN NGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTK TDGTTQ >gi|299856447|gb|ADWV01000004.1| GENE 149 151692 - 152744 1063 350 aa, chain + ## HITS:1 COG:ECs0782 KEGG:ns NR:ns ## COG: ECs0782 COG0722 # Protein_GI_number: 15830036 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli O157:H7 # 1 350 1 350 350 717 100.0 0 MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGP CSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQIN DGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLS CPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPN YSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVM VESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARRG >gi|299856447|gb|ADWV01000004.1| GENE 150 152902 - 153654 1075 250 aa, chain - ## HITS:1 COG:ECs0783 KEGG:ns NR:ns ## COG: ECs0783 COG0588 # Protein_GI_number: 15830037 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 470 100.0 1e-133 MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVL KRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFA VTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVI IAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKRYYLGNADEIAAKA AAVANQGKAK >gi|299856447|gb|ADWV01000004.1| GENE 151 153859 - 154899 1162 346 aa, chain - ## HITS:1 COG:galM KEGG:ns NR:ns ## COG: galM COG2017 # Protein_GI_number: 16128724 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli K12 # 1 346 1 346 346 707 99.0 0 MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPLSDGSVREALLGCASPE CYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQ NDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITYRATVDKPCPVNMTNHVYFNL DGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVARTSFDFRSAKIIASEFLADDDQRK VKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYTTAPALQFYSGNFLGGTPSRGTEPY ADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEEYSSLTEYQFIAE >gi|299856447|gb|ADWV01000004.1| GENE 152 154893 - 156041 1142 382 aa, chain - ## HITS:1 COG:ECs0785 KEGG:ns NR:ns ## COG: ECs0785 COG0153 # Protein_GI_number: 15830039 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 775 100.0 0 MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRD DRKVRVMAADYENQLDEFSLDAPIVAHENYQWANYVRGVVKHLQLRNNSFGGVDMVISGN VPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISAL GKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTLVGSEYNTRREQCETGARFFQQP ALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTVEAASALEQGDLKRMGELMAESHAS MRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGGGFGGCIVALIPEELVPAVQQAVAEQY EAKTGIKETFYVCKPSQGAGQC >gi|299856447|gb|ADWV01000004.1| GENE 153 156045 - 157091 726 348 aa, chain - ## HITS:1 COG:ECs0786 KEGG:ns NR:ns ## COG: ECs0786 COG1085 # Protein_GI_number: 15830040 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Escherichia coli O157:H7 # 1 348 1 348 348 702 99.0 0 MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVR VTGDKNPDYTRTYVFTNDFAALMSDTPDAPESNDPLMRCQSARGTSRVICFSPDHSKTLP ELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAE REDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAH VLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFY PPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHFRESGV >gi|299856447|gb|ADWV01000004.1| GENE 154 157101 - 158117 1064 338 aa, chain - ## HITS:1 COG:ECs0787 KEGG:ns NR:ns ## COG: ECs0787 COG1087 # Protein_GI_number: 15830041 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Escherichia coli O157:H7 # 1 338 1 338 338 706 100.0 0 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNP VGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA DGHVVAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYW ADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYPD >gi|299856447|gb|ADWV01000004.1| GENE 155 158378 - 159850 177 490 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 276 465 21 199 311 72 28 1e-11 MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSALARALAGELPLLKGER QSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTTAEIIQDEVKDAPRCMQLA QQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAERLAS LHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGAKEELLQQALVAQLAHSEQLEGV QLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKS TLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTTVRNVIL SGYFDSIGIYQAVSDRQQKLVQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHP TLLILDEPLQGLDPLNRQLIRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGG LYRYVLTKIY >gi|299856447|gb|ADWV01000004.1| GENE 156 159918 - 160706 842 262 aa, chain - ## HITS:1 COG:ECs0789 KEGG:ns NR:ns ## COG: ECs0789 COG2005 # Protein_GI_number: 15830043 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 451 100.0 1e-127 MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSE HILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISR FSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLI LLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATS LQQGQNVTAYFNADSVIIATLC >gi|299856447|gb|ADWV01000004.1| GENE 157 160835 - 160984 126 49 aa, chain + ## HITS:1 COG:no KEGG:ECSE_0815 NR:ns ## KEGG: ECSE_0815 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 49 3 51 51 77 100.0 1e-13 MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH >gi|299856447|gb|ADWV01000004.1| GENE 158 161151 - 161924 857 257 aa, chain + ## HITS:1 COG:ECs0791 KEGG:ns NR:ns ## COG: ECs0791 COG0725 # Protein_GI_number: 15830045 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 257 1 257 257 464 100.0 1e-131 MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDIATQYKKEKGVDVVSSF ASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASEQK DFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGAL ALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYL KGPQAAEIFKRYGFTTK >gi|299856447|gb|ADWV01000004.1| GENE 159 161924 - 162613 603 229 aa, chain + ## HITS:1 COG:ECs0792 KEGG:ns NR:ns ## COG: ECs0792 COG4149 # Protein_GI_number: 15830046 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 370 100.0 1e-102 MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPV VVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDV KLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRT IPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR >gi|299856447|gb|ADWV01000004.1| GENE 160 162616 - 163674 1140 352 aa, chain + ## HITS:1 COG:ECs0793 KEGG:ns NR:ns ## COG: ECs0793 COG4148 # Protein_GI_number: 15830047 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 352 1 352 352 664 99.0 0 MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGR VLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMAKSMVDQFDKLVALLGIEP LLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINI PMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVL EHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKV VNSYDDNGQVEVELEVGGKTLWARISPWARDELVIKPGLWLCAQIKSVSITA >gi|299856447|gb|ADWV01000004.1| GENE 161 163675 - 164493 1036 272 aa, chain - ## HITS:1 COG:ECs0794 KEGG:ns NR:ns ## COG: ECs0794 COG0561 # Protein_GI_number: 15830048 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli O157:H7 # 1 272 1 272 272 554 99.0 1e-158 MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALD TPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGH VIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELG LECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAM GNADDAVKARANIVIGDNTTDSIAQFIYSHLI >gi|299856447|gb|ADWV01000004.1| GENE 162 164648 - 165643 939 331 aa, chain + ## HITS:1 COG:ybhE KEGG:ns NR:ns ## COG: ybhE COG2706 # Protein_GI_number: 16128735 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Escherichia coli K12 # 1 331 1 331 331 676 99.0 0 MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRV LAYSIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV DVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRH MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHIS VYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH >gi|299856447|gb|ADWV01000004.1| GENE 163 165684 - 166517 555 277 aa, chain - ## HITS:1 COG:ybhD KEGG:ns NR:ns ## COG: ybhD COG0583 # Protein_GI_number: 16128736 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 277 62 338 338 575 99.0 1e-164 MEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACI PTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFT PLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWF YEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLS PAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG >gi|299856447|gb|ADWV01000004.1| GENE 164 166821 - 167873 756 350 aa, chain + ## HITS:1 COG:ybhH KEGG:ns NR:ns ## COG: ybhH COG2828 # Protein_GI_number: 16128737 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 350 1 350 350 678 100.0 0 MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKV AIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVR IRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQ IDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGL GDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIV PSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP >gi|299856447|gb|ADWV01000004.1| GENE 165 167949 - 169382 1758 477 aa, chain + ## HITS:1 COG:ybhI KEGG:ns NR:ns ## COG: ybhI COG0471 # Protein_GI_number: 16128738 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli K12 # 1 477 1 477 477 798 100.0 0 MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIA VAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKI GNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLM MSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVI YTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAI VVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFD GHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYG GMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML >gi|299856447|gb|ADWV01000004.1| GENE 166 169565 - 171826 2226 753 aa, chain + ## HITS:1 COG:ybhJ KEGG:ns NR:ns ## COG: ybhJ COG1048 # Protein_GI_number: 16128739 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Escherichia coli K12 # 1 753 9 761 761 1551 99.0 0 MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDS LASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGG IFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDI DYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSV DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIA LPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGC SGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAF CGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLK VCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAG NVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIA EEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP VTEITLYMESLTAEEREIIKAGSLINFNKNRQM >gi|299856447|gb|ADWV01000004.1| GENE 167 172060 - 173343 1411 427 aa, chain - ## HITS:1 COG:ybhC KEGG:ns NR:ns ## COG: ybhC COG4677 # Protein_GI_number: 16128740 # Func_class: G Carbohydrate transport and metabolism # Function: Pectin methylesterase # Organism: Escherichia coli K12 # 1 427 1 427 427 823 100.0 0 MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFA SLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPG EYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWY MYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQV QINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEF RVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIR DSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSK VVAEAKK >gi|299856447|gb|ADWV01000004.1| GENE 168 173495 - 173971 452 158 aa, chain - ## HITS:1 COG:ybhB KEGG:ns NR:ns ## COG: ybhB COG1881 # Protein_GI_number: 16128741 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Escherichia coli K12 # 1 158 1 158 158 314 100.0 4e-86 MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSG WWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTV HALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS >gi|299856447|gb|ADWV01000004.1| GENE 169 174030 - 175262 1238 410 aa, chain - ## HITS:1 COG:bioA KEGG:ns NR:ns ## COG: bioA COG0161 # Protein_GI_number: 16128742 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Escherichia coli K12 # 1 410 20 429 429 819 98.0 0 MTSPLPVYPVASAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM FGGITHTPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLT FRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMA AHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFA CEYAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAA ANASLAILESGDWQQQVADIEVQLREQLAPARNAEMVADVRVLGAIGVVETTRPVNMAAL QKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ >gi|299856447|gb|ADWV01000004.1| GENE 170 175406 - 176446 1209 346 aa, chain + ## HITS:1 COG:bioB KEGG:ns NR:ns ## COG: bioB COG0502 # Protein_GI_number: 16128743 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Escherichia coli K12 # 1 346 1 346 346 694 100.0 0 MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYC PQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGV KAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKV RDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDA FDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDK DLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL >gi|299856447|gb|ADWV01000004.1| GENE 171 176443 - 177597 999 384 aa, chain + ## HITS:1 COG:ECs0854 KEGG:ns NR:ns ## COG: ECs0854 COG0156 # Protein_GI_number: 15830108 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Escherichia coli O157:H7 # 1 384 1 384 384 654 95.0 0 MSWQEKINAALAARRTTDALRRRYPVTQGAGRWLVADDRQYLNFSSNDYLGLSHHPHIIR AWQQGAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRALLFISGFAANQAVITAMM AKEDRIVADRLSHASLLEAASLSPAQLRRFAHNDVTHLARLLAASCPGQQLVVTEGVFSM DGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGV SGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSEEGDARREKLAALIT RFRAGVQGSPFTLADSRSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARL RLTLTAAHEMQDIDRLLEMLHGNG >gi|299856447|gb|ADWV01000004.1| GENE 172 177584 - 178339 520 251 aa, chain + ## HITS:1 COG:bioC KEGG:ns NR:ns ## COG: bioC COG0500 # Protein_GI_number: 16128745 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 251 1 251 251 457 99.0 1e-129 MATVNKQAIAAAFGRAAAHYEQHADLQRQSADVLLAMLPQRKYTHVLDAGCGPGWMSRHW RERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLS TALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHY QHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLT YHLFLGVIARE >gi|299856447|gb|ADWV01000004.1| GENE 173 178332 - 179009 470 225 aa, chain + ## HITS:1 COG:bioD KEGG:ns NR:ns ## COG: bioD COG0132 # Protein_GI_number: 16128746 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Escherichia coli K12 # 1 225 1 225 225 428 98.0 1e-120 MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGSEKTPEGLRNSDALALQ HNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGG WFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQAIQHAGLTLAGWVANDVTP PGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL >gi|299856447|gb|ADWV01000004.1| GENE 174 179588 - 181609 2390 673 aa, chain + ## HITS:1 COG:ECs0857 KEGG:ns NR:ns ## COG: ECs0857 COG0556 # Protein_GI_number: 15830111 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Escherichia coli O157:H7 # 1 673 1 673 673 1265 100.0 0 MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ YARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPR FTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNEL GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRD QLHQLRELFIAAS >gi|299856447|gb|ADWV01000004.1| GENE 175 181801 - 182709 910 302 aa, chain - ## HITS:1 COG:ybhK KEGG:ns NR:ns ## COG: ybhK COG0391 # Protein_GI_number: 16128748 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 302 1 302 302 548 100.0 1e-156 MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAW GDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRN LLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAI NEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKL AIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQA LG >gi|299856447|gb|ADWV01000004.1| GENE 176 183106 - 184095 775 329 aa, chain + ## HITS:1 COG:ECs0859 KEGG:ns NR:ns ## COG: ECs0859 COG2896 # Protein_GI_number: 15830113 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 682 100.0 0 MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFA SLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVANWRDAGLTGI NVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNW IQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELLRRGWIHQLRQRSDGPAQVFCHP DYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDTQQQALEARI SAALREKKQTHFLHQNNTGITQNLSYIGG >gi|299856447|gb|ADWV01000004.1| GENE 177 184117 - 184629 608 170 aa, chain + ## HITS:1 COG:ECs0860 KEGG:ns NR:ns ## COG: ECs0860 COG0521 # Protein_GI_number: 15830114 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Escherichia coli O157:H7 # 1 170 1 170 170 338 99.0 2e-93 MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQ VSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGFGEVFRMLSFEEISTSTLQ SRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTRPCNFHPHLKK >gi|299856447|gb|ADWV01000004.1| GENE 178 184632 - 185117 676 161 aa, chain + ## HITS:1 COG:ECs0861 KEGG:ns NR:ns ## COG: ECs0861 COG0315 # Protein_GI_number: 15830115 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Escherichia coli O157:H7 # 1 161 1 161 161 296 100.0 9e-81 MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMIIDGRHHKGDVFATARI AGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAAS VAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEADD >gi|299856447|gb|ADWV01000004.1| GENE 179 185110 - 185355 301 81 aa, chain + ## HITS:1 COG:moaD KEGG:ns NR:ns ## COG: moaD COG1977 # Protein_GI_number: 16128752 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, small subunit # Organism: Escherichia coli K12 # 1 81 1 81 81 149 98.0 1e-36 MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMSAQSDRWALALEDGKLLAAVNQTLV SFDHPLTDGDEVAFFPPVTGG >gi|299856447|gb|ADWV01000004.1| GENE 180 185357 - 185809 636 150 aa, chain + ## HITS:1 COG:moaE KEGG:ns NR:ns ## COG: moaE COG0314 # Protein_GI_number: 16128753 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Escherichia coli K12 # 1 150 1 150 150 288 99.0 2e-78 MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLGDSVKALTLEHYPGMTE KALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKT RAPFWKREATPEGDRWVEARESDQQAAKRW >gi|299856447|gb|ADWV01000004.1| GENE 181 185946 - 186650 778 234 aa, chain + ## HITS:1 COG:ybhL KEGG:ns NR:ns ## COG: ybhL COG0670 # Protein_GI_number: 16128754 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Escherichia coli K12 # 1 234 1 234 234 368 100.0 1e-102 MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAANSAAVMELLFTNRVFLI GLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSSIFIVYTAASIASTFVVTA GMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFWLKSEALMWAVTYIGVIVFVG LTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLDFINLFLMLLRIFGNRR >gi|299856447|gb|ADWV01000004.1| GENE 182 187125 - 187499 146 124 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0822 NR:ns ## KEGG: ECO103_0822 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 124 111 234 234 206 100.0 2e-52 MGITGGMFAAMALICSCSNRVIPPVRQLYSYIFCGLSIAFVVNLILTSSFSVWLASILTV FIWGITAACEATTLEDLIRVADTSEISGSLRCIVPGAITLYFSILSVLFRITVTVLEFIN GLVW >gi|299856447|gb|ADWV01000004.1| GENE 183 187569 - 188282 267 237 aa, chain + ## HITS:1 COG:ybhM KEGG:ns NR:ns ## COG: ybhM COG0670 # Protein_GI_number: 16128755 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Escherichia coli K12 # 1 237 1 237 237 381 91.0 1e-106 MNSRSANNITNDFQHEARILNSIWLITALGLVTTAGLAWVAKYLEITATKYDSPQMYVAI GLLLLCMYGLSKDINKINAVIAGVIYLFLLSLVAIVVASLAPVPAIIVVFSTAGAMFLIS MLAGLLFNVDPGSHRFIIMMTLTGLALVIIMNAALMSERPVWVISCLMIVLWSGIISHGR NKLLELAGKCHSEELWSPVRCAVTGALTLYYYFIGFFGILAAIAITLVWQRHTRFFH >gi|299856447|gb|ADWV01000004.1| GENE 184 188318 - 189274 1070 318 aa, chain - ## HITS:1 COG:ybhN KEGG:ns NR:ns ## COG: ybhN COG0392 # Protein_GI_number: 16128756 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 318 1 318 318 529 99.0 1e-150 MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVV SYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPG STITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVDQTTLRILGIGLLMIIAVYLW FCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMVMGAIIWLLLGQSVNYFFVLGVL LVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGSIIAALLAYRVLYYFIPLLLALICY LLLESQAKKLRAKNEAAM >gi|299856447|gb|ADWV01000004.1| GENE 185 189274 - 190515 1285 413 aa, chain - ## HITS:1 COG:ECs0867 KEGG:ns NR:ns ## COG: ECs0867 COG1502 # Protein_GI_number: 15830121 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Escherichia coli O157:H7 # 1 413 1 413 413 835 100.0 0 MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFEDDVGKQLHAALLAAAQ RGVKAEVLLDGYGSPDLSDEFVNELTAAGVVFRYYDPRPRLFGMRTNVFRRMHRKIVVID ARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDILQFELENLPGQSAARRWWRRH HKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQARREVIIANAYFFPGYRFLHAL RKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVKGGVQVFEYRRRPLHGKVALMDDHW ATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRDNLNGIIAADCQQVDETMLPKRTWWNL TKSVLAFHFLRHFPALVGWLPAHTPRLAQVDPPAQPTMETQDRVETENTGVKP >gi|299856447|gb|ADWV01000004.1| GENE 186 190512 - 191273 574 253 aa, chain - ## HITS:1 COG:ECs0868 KEGG:ns NR:ns ## COG: ECs0868 COG3568 # Protein_GI_number: 15830122 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 520 100.0 1e-147 MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLH VENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKR GVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWR QKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALPLRTWRH LSDHAPLSAEIHL >gi|299856447|gb|ADWV01000004.1| GENE 187 191406 - 191816 478 136 aa, chain + ## HITS:1 COG:no KEGG:G2583_1019 NR:ns ## KEGG: G2583_1019 # Name: ybhQ # Def: inner membrane protein YbhQ # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 136 1 136 136 215 100.0 4e-55 MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGLCALYCVTVVMMLVFQR HPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLLAIAGLAILAGPAVVSLLA KDKKLHHLTSKHRVRR >gi|299856447|gb|ADWV01000004.1| GENE 188 191778 - 192884 1277 368 aa, chain - ## HITS:1 COG:ECs0870 KEGG:ns NR:ns ## COG: ECs0870 COG0842 # Protein_GI_number: 15830124 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 1 368 1 368 368 686 100.0 0 MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEH SVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLI LDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELVVRNWYNPNLDYKWFVVPSLI AMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVLAI GIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSG YVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWNSLWPLLVITATTGSAAY AMFRRKVM >gi|299856447|gb|ADWV01000004.1| GENE 189 192895 - 194028 1464 377 aa, chain - ## HITS:1 COG:ECs0871 KEGG:ns NR:ns ## COG: ECs0871 COG0842 # Protein_GI_number: 15830125 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 1 377 1 377 377 682 100.0 0 MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILL EQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANAT APIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQ HFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGML AMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAA FLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIAS AVMFIGLTWLKTKRRLD >gi|299856447|gb|ADWV01000004.1| GENE 190 194021 - 195757 343 578 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 330 549 12 233 318 136 34 7e-31 MNDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPD SGNATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFA RLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQM VHELAGEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHE GNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPDDIRHADGMPEININETTPRFEDAF IDLLGGAGTSESPLGAILHTVEGTPGETVIEAKELTKKFGDFAATDHVNFAVKRGEIFGL LGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKESSGKARQHLGYMAQKFSLYGNLTVE QNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPD ILFLDEPTSGVDPITRREFWLHINSMVEKGVTVMVTTHFMDEAEYCDRIGLVYRGKLIAS GTPDDLKAQSANDEQPDPTMEQAFIQLIHDWDKEHSNE >gi|299856447|gb|ADWV01000004.1| GENE 191 195750 - 196745 1286 331 aa, chain - ## HITS:1 COG:Z1015 KEGG:ns NR:ns ## COG: Z1015 COG0845 # Protein_GI_number: 15800546 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 EDL933 # 1 331 2 332 332 551 98.0 1e-157 MKKPVVIGLAVVALAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVD EGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRDEEIAQAAAAVKQAQ AAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDI AQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPV WVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLV YRLRIVVTDADDALRQGMPVTVQFGNEAGHE >gi|299856447|gb|ADWV01000004.1| GENE 192 196748 - 197419 688 223 aa, chain - ## HITS:1 COG:ECs0874 KEGG:ns NR:ns ## COG: ECs0874 COG1309 # Protein_GI_number: 15830128 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 223 5 227 227 437 100.0 1e-123 MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYYFGSKEDLYL ACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSK FISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDANDTRMILHTHALIGEILAFR LGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL >gi|299856447|gb|ADWV01000004.1| GENE 193 197648 - 199012 1462 454 aa, chain + ## HITS:1 COG:rhlE KEGG:ns NR:ns ## COG: rhlE COG0513 # Protein_GI_number: 16128765 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli K12 # 1 442 1 442 454 778 100.0 0 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI EKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQGGGRGQQQPRRGEGGAKSA SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAAQ >gi|299856447|gb|ADWV01000004.1| GENE 194 199244 - 199693 393 149 aa, chain - ## HITS:1 COG:ybiA KEGG:ns NR:ns ## COG: ybiA COG3236 # Protein_GI_number: 16128766 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 149 12 160 160 286 98.0 8e-78 MQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSSP MVAARMGRDRPKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDA YWGDGGNGKGKNRLGYLLMELREQLAIEK >gi|299856447|gb|ADWV01000004.1| GENE 195 199846 - 201996 2129 716 aa, chain + ## HITS:1 COG:ECs0877 KEGG:ns NR:ns ## COG: ECs0877 COG1199 # Protein_GI_number: 15830131 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Escherichia coli O157:H7 # 1 716 1 716 716 1433 99.0 0 MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGK TLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVC PRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAID DDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDP KNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTIPPLAI PERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLR GLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWA TREEREGQLHLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEK AGDRFVALDSPFNHCEQGKIVIPRMRFEPSIDNEEQHIAEMAAFFREQVESKKHLGMLVL FASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGEHSVLVGLQSFAEGLDL KGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRS HGCWGEVVIYDKRLLTKNYGKRLLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR >gi|299856447|gb|ADWV01000004.1| GENE 196 202024 - 202992 1028 322 aa, chain + ## HITS:1 COG:ybiB KEGG:ns NR:ns ## COG: ybiB COG0547 # Protein_GI_number: 16128768 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 322 1 320 320 639 99.0 0 MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEGEAE MLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVS EDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVR NSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQR CPQINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMAC CLVATGEAATISDGLARVNQAF >gi|299856447|gb|ADWV01000004.1| GENE 197 203133 - 204218 1237 361 aa, chain + ## HITS:1 COG:ybiC KEGG:ns NR:ns ## COG: ybiC COG2055 # Protein_GI_number: 16128769 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 1 361 1 361 361 727 99.0 0 MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAGHDSHGIGMIPSYVRSW SQGHLQINHHAKTVKESGAAVTLDGDRAFGQVAAHEAMALGIEKAHQHGIAAVALHNSHH IGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRFGTNPFCVVFPRKDNFPLLLD YATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPAVMQESPLGALLTFAEHKGYALA AMCEILGGALSGGKTTHQETLQTSPDAILNCMTTIIINPELFGAPDCNAQTEAFAEWVKA SPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGSWQAICDAARQIGMPEETLQAFCQQLA S >gi|299856447|gb|ADWV01000004.1| GENE 198 204447 - 204707 327 86 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0846 NR:ns ## KEGG: EC55989_0846 # Name: ybiJ # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 86 1 86 86 82 100.0 3e-15 MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAA AAGASGYSITSATNNNKLSGTAVIYK >gi|299856447|gb|ADWV01000004.1| GENE 199 204972 - 205238 274 88 aa, chain - ## HITS:1 COG:ybiI KEGG:ns NR:ns ## COG: ybiI COG1734 # Protein_GI_number: 16128771 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Escherichia coli K12 # 1 88 1 88 88 158 100.0 3e-39 MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLC IHCQQEKDLQKPAYTGYNRRGSKDSQLR >gi|299856447|gb|ADWV01000004.1| GENE 200 205312 - 205989 725 225 aa, chain - ## HITS:1 COG:ybiX KEGG:ns NR:ns ## COG: ybiX COG3128 # Protein_GI_number: 16128772 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated protein # Organism: Escherichia coli K12 # 1 225 13 237 237 457 99.0 1e-129 MMYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQVKNNQQVDTRSTLYAALQNEV LNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDGAVRSHPQNGWMRTDLSATLFL SDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCVTPVTRGVRVASFMWIQSMIR DDKKRAMLFELDNNIQSLKSRYGENEEILSLLNLYHNLLREWSEI >gi|299856447|gb|ADWV01000004.1| GENE 201 206031 - 208313 1988 760 aa, chain - ## HITS:1 COG:fiu KEGG:ns NR:ns ## COG: fiu COG4774 # Protein_GI_number: 16128773 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for monomeric catechols # Organism: Escherichia coli K12 # 1 760 1 760 760 1394 99.0 0 MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPQQSA DPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYM RGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRND SGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSIA FGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDS DYDDSTTDTATMRFEHDINDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWT WSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVEFTRETQTNYGVNPVTLPAVNI YHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATA CGGSGRGAITCPAGVAKGSPVTTVDTAKSGNLVNWKAGALYHLTENGNVYINYAVSQQPP GGNNFALAQSGSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQN DDGTYSQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPE HAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLD FQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF >gi|299856447|gb|ADWV01000004.1| GENE 202 208578 - 208838 262 86 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0844 NR:ns ## KEGG: ECIAI1_0844 # Name: ybiM # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 86 49 134 134 163 100.0 1e-39 MKKCLTLLIATVLSGISLTAYAAQPMSNLDSGQLRPAGTVSATGASNLSDLEDKLAEKAR EQGAKGYVINSAGGNDQMFGTATIYK >gi|299856447|gb|ADWV01000004.1| GENE 203 209114 - 210040 852 308 aa, chain + ## HITS:1 COG:ybiN KEGG:ns NR:ns ## COG: ybiN COG3129 # Protein_GI_number: 16128775 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Escherichia coli K12 # 1 308 28 335 335 636 99.0 0 MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALL AHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPL IGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRRQKESGAIFNGIIHKNEQYD ATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVAFIKKMIEES KGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQR RRFVNRQR >gi|299856447|gb|ADWV01000004.1| GENE 204 210037 - 212262 1985 741 aa, chain - ## HITS:1 COG:ECs0886_2 KEGG:ns NR:ns ## COG: ECs0886_2 COG0668 # Protein_GI_number: 15830140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 431 741 1 311 311 580 99.0 1e-165 MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQKKAAYGALADVLDNDT SRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEVSRHYGEALSARFGQLYRN ITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCALPLYRKMGQWARQKNRERSNW LQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIEFFKAVL RLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIGYGLIVAVPIISNQVNVQIGALANV IIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLAFFSLFIRAFALVWHWLASAYFIVLFF FSLFDPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPELQKRLN GWLSAALKTARILTVCVAVMLLLSAWGLFDFWNWLQNGAGQKTVDILIRIALILFFSAVG WTVLASLIENRLASDIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAPL LAGAGALGLAISFGSQTLVKDIITGVFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVR QDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVAELMENEEIR GLVIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTY QVLPAPGAAPAEPLPPGEPTL >gi|299856447|gb|ADWV01000004.1| GENE 205 212379 - 213101 594 240 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 233 47 5e-60 MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV DGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGANKEEAEKLAREL LAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVMQ DLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNPPSQRLQEFLQHVS >gi|299856447|gb|ADWV01000004.1| GENE 206 213098 - 213757 960 219 aa, chain - ## HITS:1 COG:ECs0888 KEGG:ns NR:ns ## COG: ECs0888 COG0765 # Protein_GI_number: 15830142 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 373 100.0 1e-103 MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIE VIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGF REAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEI IAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL >gi|299856447|gb|ADWV01000004.1| GENE 207 213896 - 214642 1063 248 aa, chain - ## HITS:1 COG:ECs0889 KEGG:ns NR:ns ## COG: ECs0889 COG0834 # Protein_GI_number: 15830143 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 462 100.0 1e-130 MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKE LKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDGYYKSGLLVMVKANN NDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDT PNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYK KWFGTEPK >gi|299856447|gb|ADWV01000004.1| GENE 208 215046 - 215549 599 167 aa, chain - ## HITS:1 COG:ECs0890 KEGG:ns NR:ns ## COG: ECs0890 COG0783 # Protein_GI_number: 15830144 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 305 100.0 3e-83 MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFI AVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKE LADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIESNIE >gi|299856447|gb|ADWV01000004.1| GENE 209 215848 - 216675 940 275 aa, chain - ## HITS:1 COG:ECs0891 KEGG:ns NR:ns ## COG: ECs0891 COG5006 # Protein_GI_number: 15830145 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Escherichia coli O157:H7 # 1 275 21 295 295 451 100.0 1e-126 MASIQGGASLAKSLFPLVGAPGVTALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVS LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQ DVSHVDLTGCALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGE ALWHWSVIPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGET LTPIQLLALGAIIAASMGSTLTVRKESKIKELDIN >gi|299856447|gb|ADWV01000004.1| GENE 210 217088 - 217603 559 171 aa, chain + ## HITS:1 COG:ECs0892 KEGG:ns NR:ns ## COG: ECs0892 COG3637 # Protein_GI_number: 15830146 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Opacity protein and related surface antigens # Organism: Escherichia coli O157:H7 # 1 171 1 171 171 301 100.0 4e-82 MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKMGGFNLKYRYEEDNSPL GVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQTTEYPT YKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF >gi|299856447|gb|ADWV01000004.1| GENE 211 217652 - 219235 1377 527 aa, chain - ## HITS:1 COG:ybiP KEGG:ns NR:ns ## COG: ybiP COG2194 # Protein_GI_number: 16128783 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 527 1 527 527 1065 98.0 0 MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTAAFTAILLLLWRTLPRV QKVLVGISSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYMVGIFIF VLGVIAIRRKKESEKARWNTFDSLCLVFSVATFFVAPVQNLAWGGVFKLKDTGYPVFRFA KDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQTYVVVIGESARRDALGAFGGHWD NTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVDGKPQFQDNFVTLANRAGFQTWWFS NQGQIGEYDTAIASIAKRADEVYFLKEGNFEADKNTKDEALLDMTAQVLAQEHSQPQLIV LHLMGSHPQACDRTQGKYETFVQSKETSCYLYTMTQTDDLLRKLYDQLRNSGSSFSLVYF SDHGLAFKERGKDVQYLAHDDKYQQNFQVPFMVISSDDKAHRVIKARRSANDFLGFFSQW TGIKAKEINIKYPFISEKKAGSIYITNFQLQKVDYNHLGTDIFDPKP >gi|299856447|gb|ADWV01000004.1| GENE 212 219821 - 220288 491 155 aa, chain + ## HITS:1 COG:ybiQ KEGG:ns NR:ns ## COG: ybiQ COG1321 # Protein_GI_number: 16128785 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Escherichia coli K12 # 1 155 1 155 155 268 100.0 2e-72 MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLIREVGEARQVDM AARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLG VSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK >gi|299856447|gb|ADWV01000004.1| GENE 213 220285 - 221403 1017 372 aa, chain + ## HITS:1 COG:ybiR KEGG:ns NR:ns ## COG: ybiR COG0471 # Protein_GI_number: 16128786 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli K12 # 1 372 1 372 372 617 99.0 1e-176 MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHTIITLSGLMLLTKGVEL SGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVALFIVVPLTITLKRLCEIPV NRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFIAQMAPLAGAMMLTLLLLCWC CFPGKALQYHTGVQTPEWKPRLVWSCLGLYIVFLTALEFKQELWGLVIVAAGFALLARRV VLSVDWTLLLVFMAMFIDVHLLTQLPALQGVLGNVSHLSEPGLWLTAIGLSQVISNVPST ILLLNYVPPSLLLVWAVNVGGFGLLPGSLANLIALRMANDRRIWWRFHLYSIPMLLWAAL VGYVLLVILPAN >gi|299856447|gb|ADWV01000004.1| GENE 214 221462 - 222382 1114 306 aa, chain - ## HITS:1 COG:ECs0896 KEGG:ns NR:ns ## COG: ECs0896 COG1376 # Protein_GI_number: 15830150 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 599 100.0 1e-171 MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEY QMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTV IVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPM GLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKA TTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSG MPVRLN >gi|299856447|gb|ADWV01000004.1| GENE 215 222601 - 224193 1992 530 aa, chain + ## HITS:1 COG:ECs0897 KEGG:ns NR:ns ## COG: ECs0897 COG0488 # Protein_GI_number: 15830151 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 530 1 530 530 1053 100.0 0 MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSL DPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVADLE VKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLD EPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEY MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKAS SRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKST LLKTLVGDLQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRS ILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMA LELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYLRSKGIE >gi|299856447|gb|ADWV01000004.1| GENE 216 224259 - 224408 72 49 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E1227 NR:ns ## KEGG: SbBS512_E1227 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 6 49 183 226 226 85 95.0 7e-16 MRYAYQALYYPSSAEKIGQFSLPAVRMPYRALGSNLLRRFMQRTAFLPK Prediction of potential genes in microbial genomes Time: Sun May 15 15:10:12 2011 Seq name: gi|299856446|gb|ADWV01000005.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont4.1, whole genome shotgun sequence Length of sequence - 216563 bp Number of predicted genes - 205, with homology - 202 Number of transcription units - 116, operones - 37 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 270 - 329 3.4 2 2 Tu 1 . + CDS 490 - 1776 1552 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 1793 - 1825 6.3 - Term 1781 - 1813 6.3 3 3 Tu 1 . - CDS 1838 - 2044 257 ## G2583_5047 hypothetical protein - Prom 2196 - 2255 5.0 + Prom 2136 - 2195 5.4 4 4 Tu 1 . + CDS 2369 - 2926 708 ## COG3054 Predicted transcriptional regulator - Term 2870 - 2907 5.1 5 5 Tu 1 . - CDS 2916 - 3656 748 ## COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase - Prom 3693 - 3752 4.3 + Prom 3737 - 3796 5.1 6 6 Tu 1 . + CDS 3846 - 5789 2102 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases + Term 5826 - 5870 -0.7 - Term 5809 - 5849 4.2 7 7 Tu 1 . - CDS 5918 - 6388 439 ## COG1733 Predicted transcriptional regulators - Prom 6461 - 6520 1.5 + Prom 6254 - 6313 3.1 8 8 Tu 1 . + CDS 6387 - 7247 859 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 9 9 Tu 1 . + CDS 7355 - 8320 952 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 8346 - 8405 5.3 10 10 Tu 1 . + CDS 8428 - 9090 936 ## COG2846 Regulator of cell morphogenesis and NO signaling - Term 9085 - 9122 8.2 11 11 Tu 1 . - CDS 9135 - 10547 1436 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 10736 - 10795 3.7 12 12 Tu 1 . - CDS 10856 - 11476 976 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Prom 11548 - 11607 4.9 + Prom 11611 - 11670 2.8 13 13 Tu 1 . + CDS 11695 - 12333 544 ## COG3061 Cell envelope opacity-associated protein A - Term 12212 - 12253 2.1 14 14 Tu 1 . - CDS 12317 - 12964 503 ## COG1309 Transcriptional regulator - Prom 13023 - 13082 4.1 15 15 Op 1 . + CDS 13177 - 13968 940 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 16 15 Op 2 1/0.839 + CDS 13978 - 14820 803 ## COG1082 Sugar phosphate isomerases/epimerases 17 15 Op 3 3/0.419 + CDS 14830 - 15606 745 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 18 15 Op 4 . + CDS 15616 - 17157 1695 ## COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase 19 15 Op 5 . + CDS 17154 - 19235 1423 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 20 15 Op 6 11/0.000 + CDS 19256 - 19732 268 ## PROTEIN SUPPORTED gi|90020580|ref|YP_526407.1| ribosomal protein S3 21 15 Op 7 9/0.065 + CDS 19775 - 21076 1260 ## PROTEIN SUPPORTED gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 + Term 21088 - 21118 3.0 22 16 Tu 1 . + CDS 21129 - 22100 687 ## PROTEIN SUPPORTED gi|149199369|ref|ZP_01876406.1| Ribosomal protein L22 + Term 22112 - 22142 0.1 - Term 22150 - 22193 11.1 23 17 Op 1 27/0.000 - CDS 22212 - 22661 720 ## PROTEIN SUPPORTED gi|15804792|ref|NP_290833.1| 50S ribosomal protein L9 24 17 Op 2 11/0.000 - CDS 22703 - 22930 385 ## PROTEIN SUPPORTED gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 - Term 23085 - 23129 0.3 25 17 Op 3 . - CDS 23256 - 23651 680 ## PROTEIN SUPPORTED gi|221800783|ref|NP_418621.2| 30S ribosomal subunit protein S6 - Prom 23743 - 23802 3.1 + Prom 23803 - 23862 3.3 26 18 Tu 1 . + CDS 23978 - 24253 230 ## LF82_3468 UPF0379 protein YjfY + Term 24294 - 24324 3.0 - Term 24151 - 24175 -1.0 27 19 Op 1 8/0.065 - CDS 24382 - 25068 787 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 28 19 Op 2 9/0.065 - CDS 25068 - 25922 1089 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 29 19 Op 3 8/0.065 - CDS 25932 - 26582 889 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 30 19 Op 4 13/0.000 - CDS 26596 - 27060 601 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 31 19 Op 5 11/0.000 - CDS 27070 - 27375 354 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 32 19 Op 6 . - CDS 27391 - 28788 1730 ## COG3037 Uncharacterized protein conserved in bacteria + Prom 28837 - 28896 4.8 33 20 Tu 1 . + CDS 29143 - 30207 1143 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold + Term 30217 - 30268 11.1 + Prom 30231 - 30290 3.6 34 21 Tu 1 . + CDS 30315 - 31070 778 ## COG1349 Transcriptional regulators of sugar metabolism 35 22 Tu 1 . - CDS 31067 - 31816 618 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 31974 - 32033 3.7 + Prom 31912 - 31971 2.6 36 23 Tu 1 . + CDS 31998 - 32327 187 ## APECO1_2203 hypothetical protein + Prom 32340 - 32399 4.3 37 24 Tu 1 . + CDS 32464 - 32751 229 ## SSON_4370 hypothetical protein 38 25 Op 1 1/0.839 - CDS 32868 - 34493 1195 ## COG1960 Acyl-CoA dehydrogenases 39 25 Op 2 5/0.194 - CDS 34577 - 35740 1083 ## COG0754 Glutathionylspermidine synthase 40 25 Op 3 5/0.194 - CDS 35743 - 36381 324 ## COG5463 Predicted integral membrane protein 41 25 Op 4 . - CDS 36391 - 36789 368 ## COG3766 Predicted membrane protein 42 25 Op 5 . - CDS 36807 - 37466 707 ## ECO103_4976 hypothetical protein - Term 37473 - 37511 6.1 43 26 Op 1 6/0.097 - CDS 37517 - 38215 942 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription 44 26 Op 2 4/0.290 - CDS 38234 - 38635 343 ## COG3789 Uncharacterized protein conserved in bacteria - Prom 38690 - 38749 6.9 - Term 38706 - 38747 7.4 45 27 Tu 1 . - CDS 38762 - 39493 455 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 - Prom 39533 - 39592 7.1 46 28 Op 1 2/0.677 - CDS 39673 - 42114 1249 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 47 28 Op 2 5/0.194 - CDS 42153 - 42506 248 ## COG1959 Predicted transcriptional regulator - Prom 42598 - 42657 4.2 48 29 Tu 1 . - CDS 42783 - 44081 1450 ## COG0104 Adenylosuccinate synthase - Prom 44105 - 44164 4.0 49 30 Op 1 11/0.000 - CDS 44185 - 44382 234 ## COG3242 Uncharacterized protein conserved in bacteria - Term 44396 - 44434 7.2 50 30 Op 2 21/0.000 - CDS 44464 - 45468 1392 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 51 30 Op 3 8/0.065 - CDS 45471 - 46730 1494 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 52 30 Op 4 16/0.000 - CDS 46816 - 48096 733 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 - Term 48106 - 48151 6.2 53 30 Op 5 15/0.000 - CDS 48173 - 48481 331 ## COG1923 Uncharacterized host factor I protein 54 30 Op 6 12/0.000 - CDS 48567 - 49472 588 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 55 30 Op 7 10/0.065 - CDS 49510 - 51357 1743 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 56 30 Op 8 13/0.000 - CDS 51367 - 52704 1052 ## COG0860 N-acetylmuramoyl-L-alanine amidase 57 30 Op 9 6/0.097 - CDS 52723 - 53184 495 ## COG0802 Predicted ATPase or kinase 58 30 Op 10 . - CDS 53156 - 54688 1044 ## PROTEIN SUPPORTED gi|153825000|ref|ZP_01977667.1| ribosomal protein S15 - Prom 54734 - 54793 2.8 + Prom 54618 - 54677 5.0 59 31 Tu 1 . + CDS 54702 - 55841 919 ## COG1600 Uncharacterized Fe-S protein - TRNA 56111 - 56186 93.7 # Gly GCC 0 0 - TRNA 56222 - 56297 93.7 # Gly GCC 0 0 - TRNA 56334 - 56409 93.7 # Gly GCC 0 0 60 32 Tu 1 . - CDS 56620 - 57165 785 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) - Prom 57208 - 57267 1.9 + Prom 57121 - 57180 2.7 61 33 Op 1 2/0.677 + CDS 57260 - 58312 1010 ## COG1162 Predicted GTPases 62 33 Op 2 5/0.194 + CDS 58409 - 59377 1048 ## COG0688 Phosphatidylserine decarboxylase 63 33 Op 3 . + CDS 59399 - 62722 3456 ## COG3264 Small-conductance mechanosensitive channel + Term 62811 - 62849 -0.1 64 34 Op 1 . - CDS 62751 - 63065 261 ## JW4119 conserved inner membrane protein 65 34 Op 2 . - CDS 63062 - 63376 268 ## JW4118 hypothetical protein 66 34 Op 3 1/0.839 - CDS 63428 - 64885 1327 ## COG0531 Amino acid transporters - Prom 65051 - 65110 3.9 - Term 65088 - 65116 -1.0 67 35 Tu 1 . - CDS 65149 - 66126 1057 ## COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) - Prom 66269 - 66328 7.1 + Prom 66227 - 66286 3.4 68 36 Op 1 36/0.000 + CDS 66451 - 68259 1986 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 69 36 Op 2 10/0.065 + CDS 68252 - 68986 786 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 70 36 Op 3 10/0.065 + CDS 68997 - 69392 518 ## COG3029 Fumarate reductase subunit C 71 36 Op 4 3/0.419 + CDS 69403 - 69762 423 ## COG3080 Fumarate reductase subunit D + Term 69782 - 69816 8.1 72 37 Op 1 3/0.419 + CDS 69825 - 70958 878 ## COG1680 Beta-lactamase class C and other penicillin binding proteins + Term 70969 - 70998 2.1 + Prom 70967 - 71026 2.0 73 37 Op 2 . + CDS 71047 - 71580 672 ## COG3040 Bacterial lipocalin 74 38 Tu 1 . - CDS 71577 - 71894 444 ## COG2076 Membrane transporters of cations and cationic drugs - Prom 71970 - 72029 4.2 - Term 72025 - 72062 6.2 75 39 Tu 1 . - CDS 72076 - 72222 97 ## COG5510 Predicted small secreted protein - Prom 72244 - 72303 3.5 - Term 72463 - 72503 10.5 76 40 Tu 1 . - CDS 72510 - 73076 676 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 73120 - 73179 3.7 + Prom 73014 - 73073 3.3 77 41 Tu 1 . + CDS 73118 - 74146 917 ## COG1509 Lysine 2,3-aminomutase + Term 74172 - 74214 0.4 + Prom 74353 - 74412 5.6 78 42 Tu 1 . + CDS 74536 - 75405 822 ## ECO103_4941 hypothetical protein + Term 75519 - 75551 -0.2 - Term 75502 - 75543 -0.2 79 43 Tu 1 . - CDS 75598 - 75951 351 ## ECIAI1_4377 hypothetical protein - Prom 76002 - 76061 3.8 - Term 76022 - 76059 6.0 80 44 Op 1 41/0.000 - CDS 76089 - 77735 2383 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 81 44 Op 2 . - CDS 77779 - 78072 464 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 78192 - 78251 6.0 + Prom 78224 - 78283 2.3 82 45 Tu 1 . + CDS 78348 - 79604 1194 ## COG0531 Amino acid transporters - Term 79567 - 79611 -0.4 83 46 Tu 1 . - CDS 79620 - 80096 363 ## COG3030 Protein affecting phage T7 exclusion by the F plasmid - Prom 80153 - 80212 3.1 + Prom 80216 - 80275 5.7 84 47 Tu 1 . + CDS 80433 - 81869 1686 ## COG1027 Aspartate ammonia-lyase + Term 81896 - 81927 4.1 + Prom 81886 - 81945 3.1 85 48 Tu 1 . + CDS 81987 - 83288 1282 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 83298 - 83329 5.5 86 49 Op 1 7/0.097 + CDS 83404 - 83742 287 ## COG1324 Uncharacterized protein involved in tolerance to divalent cations 87 49 Op 2 3/0.419 + CDS 83718 - 85415 1629 ## COG4232 Thiol:disulfide interchange protein 88 49 Op 3 . + CDS 85452 - 86027 761 ## COG1309 Transcriptional regulator + Term 86156 - 86223 30.2 + TRNA 86134 - 86209 84.1 # Phe GAA 0 0 + Prom 86136 - 86195 80.0 89 50 Tu 1 . + CDS 86407 - 87669 368 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 + Term 87670 - 87713 8.1 - Term 87646 - 87709 9.5 90 51 Op 1 . - CDS 87934 - 88500 213 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase 91 51 Op 2 . - CDS 88621 - 89124 232 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Term 89385 - 89411 -0.7 92 52 Tu 1 . - CDS 89445 - 90002 286 ## COG2801 Transposase and inactivated derivatives - Prom 90054 - 90113 4.7 93 53 Tu 1 . - CDS 90200 - 90373 61 ## gi|194429610|ref|ZP_03062129.1| hypothetical protein EcB171_3170 - Prom 90418 - 90477 3.8 94 54 Tu 1 . - CDS 90515 - 90724 109 ## - Prom 90803 - 90862 3.6 95 55 Tu 1 . + CDS 91309 - 92007 220 ## Nwat_3173 hypothetical protein + Prom 93333 - 93392 2.7 96 56 Op 1 . + CDS 93442 - 93675 139 ## gi|92110293|emb|CAJ87562.1| putative competence protein 97 56 Op 2 . + CDS 93687 - 95570 495 ## gi|300816573|ref|ZP_07096794.1| conserved hypothetical protein 98 57 Tu 1 . - CDS 95707 - 96165 -336 ## - Prom 96231 - 96290 5.1 + Prom 96536 - 96595 3.0 99 58 Tu 1 . + CDS 96622 - 102132 616 ## COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster + Term 102141 - 102185 8.7 + Prom 102214 - 102273 5.3 100 59 Tu 1 . + CDS 102382 - 102660 337 ## COG2801 Transposase and inactivated derivatives 101 60 Tu 1 . - CDS 102650 - 102892 138 ## SeAg_B4809 hypothetical protein - Prom 103061 - 103120 3.1 + Prom 102852 - 102911 2.2 102 61 Tu 1 . + CDS 102944 - 103492 345 ## COG2801 Transposase and inactivated derivatives 103 62 Tu 1 . - CDS 103557 - 103781 216 ## ECP_2965 hypothetical protein - Prom 103912 - 103971 5.3 104 63 Op 1 . - CDS 104392 - 105384 207 ## ECP_2966 PixG protein 105 63 Op 2 . - CDS 105407 - 105670 109 ## ECP_2967 PixF protein - Prom 105824 - 105883 6.3 106 64 Op 1 . - CDS 106009 - 106572 231 ## ECP_2968 PixJ protein 107 64 Op 2 10/0.065 - CDS 106609 - 107340 546 ## COG3121 P pilus assembly protein, chaperone PapD 108 64 Op 3 . - CDS 107409 - 109868 1769 ## COG3188 P pilus assembly protein, porin PapC - Prom 109911 - 109970 4.0 - Term 109986 - 110014 -0.0 109 65 Op 1 . - CDS 110040 - 110627 318 ## ECP_2971 PixH protein 110 65 Op 2 . - CDS 110713 - 111219 444 ## COG3539 P pilus assembly protein, pilin FimA - Prom 111300 - 111359 5.6 111 66 Tu 1 . - CDS 112343 - 112837 247 ## ECP_2974 hypothetical protein - Prom 113079 - 113138 2.7 112 67 Op 1 3/0.419 - CDS 113196 - 114443 929 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 113 67 Op 2 3/0.419 - CDS 114433 - 116442 1354 ## COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system 114 67 Op 3 . - CDS 116439 - 117710 815 ## COG1840 ABC-type Fe3+ transport system, periplasmic component - Prom 117927 - 117986 5.6 + Prom 117799 - 117858 6.0 115 68 Tu 1 . + CDS 118055 - 119419 1143 ## COG2271 Sugar phosphate permease + Prom 119750 - 119809 5.2 116 69 Op 1 . + CDS 119888 - 120061 79 ## ECP_2980 hypothetical protein 117 69 Op 2 . + CDS 120006 - 120182 96 ## COG2963 Transposase and inactivated derivatives 118 69 Op 3 . + CDS 120267 - 120422 57 ## - Term 120308 - 120346 6.0 119 70 Op 1 . - CDS 120368 - 121381 650 ## ECP_2981 putative cytoplasmic protein 120 70 Op 2 2/0.677 - CDS 121393 - 122454 912 ## COG0738 Fucose permease - Prom 122632 - 122691 3.5 - Term 122635 - 122670 -0.6 121 71 Tu 1 . - CDS 122737 - 123657 729 ## COG0524 Sugar kinases, ribokinase family + Prom 123840 - 123899 3.9 122 72 Tu 1 . + CDS 123961 - 124743 422 ## COG1349 Transcriptional regulators of sugar metabolism 123 73 Tu 1 . - CDS 125651 - 125788 61 ## c1235 hypothetical protein 124 74 Op 1 . - CDS 125891 - 126085 58 ## c0314 hypothetical protein 125 74 Op 2 . - CDS 126138 - 126401 197 ## ECP_2988 hypothetical protein 126 75 Op 1 9/0.065 + CDS 127357 - 128379 611 ## COG4584 Transposase and inactivated derivatives 127 75 Op 2 . + CDS 128379 - 129158 579 ## COG1484 DNA replication protein 128 76 Op 1 . - CDS 129168 - 129560 115 ## c0311 hypothetical protein 129 76 Op 2 . - CDS 129557 - 129940 226 ## c0310 hypothetical protein - Term 130185 - 130217 3.3 130 77 Tu 1 . - CDS 130312 - 130911 150 ## c0309 hypothetical protein - Prom 131083 - 131142 2.1 + Prom 132274 - 132333 3.6 131 78 Tu 1 . + CDS 132360 - 133151 249 ## EcE24377A_3335 hypothetical protein + Term 133222 - 133256 1.0 + Prom 133226 - 133285 2.3 132 79 Op 1 . + CDS 133535 - 133741 372 ## COG3311 Predicted transcriptional regulator + Term 133792 - 133820 1.4 133 79 Op 2 . + CDS 133835 - 134437 531 ## EcE24377A_3337 hypothetical protein + Term 134537 - 134576 6.2 134 80 Tu 1 . - CDS 134340 - 134537 126 ## c0304 hypothetical protein 135 81 Tu 1 . + CDS 136398 - 137579 404 ## ECIAI39_1028 hypothetical protein - Term 138032 - 138066 4.5 136 82 Tu 1 . - CDS 138088 - 141720 1662 ## SMU.1577c hypothetical protein - Prom 141859 - 141918 5.4 137 83 Tu 1 . + CDS 142206 - 143078 830 ## COG3596 Predicted GTPase + Term 143196 - 143232 3.4 + Prom 143175 - 143234 3.3 138 84 Tu 1 . + CDS 143450 - 146296 2247 ## COG3468 Type V secretory pathway, adhesin AidA + Term 146318 - 146354 10.3 139 85 Tu 1 . + CDS 146624 - 147442 678 ## ECO26_3416 hypothetical protein + Prom 147448 - 147507 1.5 140 86 Op 1 . + CDS 147534 - 148019 489 ## ECO111_0312 hypothetical protein 141 86 Op 2 . + CDS 148035 - 148511 486 ## COG2003 DNA repair proteins 142 86 Op 3 . + CDS 148574 - 148795 337 ## c3673 hypothetical protein 143 87 Op 1 . + CDS 148958 - 149326 211 ## ECP_0337 hypothetical protein 144 87 Op 2 . + CDS 149416 - 149793 203 ## ECED1_3493 toxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage 145 87 Op 3 . + CDS 149790 - 149993 269 ## EcHS_A2141 hypothetical protein + Term 150148 - 150186 5.0 146 88 Tu 1 . + CDS 150835 - 150975 63 ## EcHS_A2143 hypothetical protein + Term 151036 - 151075 1.7 147 89 Tu 1 . + CDS 151573 - 151884 83 ## ECO26_2916 hypothetical protein + Term 152082 - 152134 0.2 - Term 151992 - 152026 6.9 148 90 Tu 1 2/0.677 - CDS 152043 - 152372 529 ## COG2926 Uncharacterized protein conserved in bacteria - Prom 152477 - 152536 3.9 149 91 Tu 1 4/0.290 - CDS 152544 - 153602 915 ## COG1289 Predicted membrane protein - Prom 153729 - 153788 2.6 - Term 153721 - 153767 -0.6 150 92 Tu 1 . - CDS 153800 - 154273 442 ## COG3449 DNA gyrase inhibitor - Prom 154296 - 154355 6.8 151 93 Tu 1 . - CDS 154391 - 155557 964 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 155584 - 155643 2.9 + Prom 155571 - 155630 2.7 152 94 Tu 1 . + CDS 155766 - 157193 1225 ## COG2925 Exonuclease I + Term 157201 - 157238 6.8 153 95 Op 1 10/0.065 - CDS 157236 - 157463 307 ## COG0425 Predicted redox protein, regulator of disulfide bond formation 154 95 Op 2 2/0.677 - CDS 157477 - 158535 730 ## COG2391 Predicted transporter component - Prom 158647 - 158706 7.3 - Term 158646 - 158703 14.5 155 96 Tu 1 . - CDS 158714 - 160072 1672 ## COG0531 Amino acid transporters - Prom 160271 - 160330 4.2 - Term 160218 - 160250 2.3 156 97 Op 1 2/0.677 - CDS 160339 - 161268 854 ## COG0583 Transcriptional regulator 157 97 Op 2 . - CDS 161314 - 162138 800 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Term 162182 - 162219 1.5 158 98 Op 1 6/0.097 - CDS 162221 - 162475 123 ## COG4115 Uncharacterized protein conserved in bacteria 159 98 Op 2 . - CDS 162472 - 162723 304 ## COG2161 Antitoxin of toxin-antitoxin stability system - Prom 162743 - 162802 8.2 160 99 Op 1 18/0.000 + CDS 163202 - 164101 1081 ## COG0040 ATP phosphoribosyltransferase 161 99 Op 2 19/0.000 + CDS 164107 - 165411 1258 ## COG0141 Histidinol dehydrogenase 162 99 Op 3 13/0.000 + CDS 165408 - 166478 1166 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 163 99 Op 4 18/0.000 + CDS 166478 - 167545 1300 ## COG0131 Imidazoleglycerol-phosphate dehydratase 164 99 Op 5 25/0.000 + CDS 167545 - 168135 728 ## COG0118 Glutamine amidotransferase 165 99 Op 6 23/0.000 + CDS 168135 - 168872 889 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 166 99 Op 7 24/0.000 + CDS 168854 - 169630 921 ## COG0107 Imidazoleglycerol-phosphate synthase 167 99 Op 8 . + CDS 169624 - 170235 722 ## COG0139 Phosphoribosyl-AMP cyclohydrolase + Term 170285 - 170324 5.1 - Term 170269 - 170315 10.0 168 100 Tu 1 2/0.677 - CDS 170332 - 171309 1073 ## COG3765 Chain length determinant protein - Prom 171376 - 171435 6.0 - Term 171411 - 171445 6.0 169 101 Tu 1 . - CDS 171456 - 172622 1064 ## COG1004 Predicted UDP-glucose 6-dehydrogenase - Prom 172743 - 172802 5.3 - Term 172813 - 172843 5.0 170 102 Tu 1 . - CDS 172925 - 173170 212 ## COG1943 Transposase and inactivated derivatives - Term 173520 - 173554 7.4 171 103 Tu 1 . - CDS 173581 - 174987 1929 ## COG0362 6-phosphogluconate dehydrogenase - Prom 175041 - 175100 3.6 172 104 Op 1 . - CDS 175136 - 175954 145 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 173 104 Op 2 . - CDS 175961 - 176446 25 ## ECSE_2307 putative glycosyltransferase - Prom 176587 - 176646 3.1 - Term 176729 - 176769 -1.0 174 105 Tu 1 . - CDS 176977 - 177366 72 ## gi|300816662|ref|ZP_07096883.1| hypothetical protein HMPREF9345_01715 - Prom 177415 - 177474 4.6 175 106 Op 1 . - CDS 178074 - 179006 297 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 176 106 Op 2 . - CDS 179006 - 179659 139 ## Spro_2886 glycosyl transferase family protein - Prom 179899 - 179958 6.1 177 107 Tu 1 . - CDS 179997 - 180539 107 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - Prom 180560 - 180619 4.2 - Term 181510 - 181561 2.4 178 108 Tu 1 3/0.419 - CDS 181594 - 182487 968 ## COG1210 UDP-glucose pyrophosphorylase - Prom 182590 - 182649 2.6 179 109 Tu 1 . - CDS 182730 - 183725 692 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Prom 183820 - 183879 2.5 180 110 Op 1 . - CDS 183883 - 185277 814 ## ECIAI1_2118 putative colanic acid biosynthesis protein 181 110 Op 2 7/0.097 - CDS 185288 - 186508 974 ## COG0438 Glycosyltransferase 182 110 Op 3 4/0.290 - CDS 186505 - 187785 1444 ## COG2327 Uncharacterized conserved protein - Prom 187850 - 187909 5.3 - Term 188001 - 188054 1.4 183 111 Op 1 7/0.097 - CDS 188060 - 189538 1776 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 184 111 Op 2 4/0.290 - CDS 189540 - 190934 1488 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 185 112 Op 1 11/0.000 - CDS 191070 - 192440 1692 ## COG1109 Phosphomannomutase - Prom 192555 - 192614 3.2 186 112 Op 2 5/0.194 - CDS 192633 - 194069 1629 ## COG0836 Mannose-1-phosphate guanylyltransferase 187 112 Op 3 6/0.097 - CDS 194072 - 195295 1213 ## COG0438 Glycosyltransferase 188 112 Op 4 3/0.419 - CDS 195292 - 195771 466 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 189 112 Op 5 14/0.000 - CDS 195774 - 196739 1050 ## COG0451 Nucleoside-diphosphate-sugar epimerases 190 112 Op 6 5/0.194 - CDS 196742 - 197863 1464 ## COG1089 GDP-D-mannose dehydratase 191 112 Op 7 7/0.097 - CDS 197889 - 198437 389 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 192 112 Op 8 . - CDS 198453 - 199199 653 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 193 112 Op 9 . - CDS 199210 - 200427 964 ## B21_01951 hypothetical protein 194 112 Op 10 5/0.194 - CDS 200402 - 201619 1284 ## COG0438 Glycosyltransferase 195 112 Op 11 4/0.290 - CDS 201616 - 202104 438 ## COG1045 Serine acetyltransferase 196 112 Op 12 2/0.677 - CDS 202107 - 202946 741 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 197 112 Op 13 3/0.419 - CDS 203039 - 205201 2771 ## COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis 198 112 Op 14 6/0.097 - CDS 205204 - 205647 417 ## COG0394 Protein-tyrosine-phosphatase 199 112 Op 15 . - CDS 205653 - 206708 989 ## COG1596 Periplasmic protein involved in polysaccharide export - Prom 206877 - 206936 6.0 + Prom 207277 - 207336 5.0 200 113 Tu 1 . + CDS 207451 - 209034 1814 ## COG1253 Hemolysins and related proteins containing CBS domains - Term 209064 - 209114 1.7 201 114 Op 1 4/0.290 - CDS 209308 - 211161 1273 ## COG2982 Uncharacterized protein involved in outer membrane biogenesis 202 114 Op 2 4/0.290 - CDS 211183 - 211764 735 ## COG0717 Deoxycytidine deaminase 203 114 Op 3 . - CDS 211856 - 212497 625 ## COG0572 Uridine kinase + Prom 212694 - 212753 4.6 204 115 Tu 1 . + CDS 212815 - 216132 2698 ## COG2202 FOG: PAS/PAC domain 205 116 Tu 1 . - CDS 216171 - 216563 287 ## COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase Predicted protein(s) >gi|299856446|gb|ADWV01000005.1| GENE 1 101 - 265 93 54 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E1227 NR:ns ## KEGG: SbBS512_E1227 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 10 54 182 226 226 89 95.0 5e-17 MQYCLMRYANQALYYPSSAEKIGQFSLPAVRMPYRALGSNLLRRFMQRTAFLPK >gi|299856446|gb|ADWV01000005.1| GENE 2 490 - 1776 1552 428 aa, chain + ## HITS:1 COG:ECs5196 KEGG:ns NR:ns ## COG: ECs5196 COG1253 # Protein_GI_number: 15834450 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli O157:H7 # 1 428 20 447 447 843 100.0 0 MSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAA FSPAFHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINP MRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHE LIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGY VDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALV VGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNY ETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDA KDKEESVA >gi|299856446|gb|ADWV01000005.1| GENE 3 1838 - 2044 257 68 aa, chain - ## HITS:1 COG:no KEGG:G2583_5047 NR:ns ## KEGG: G2583_5047 # Name: ytfK # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 68 14 81 81 119 100.0 4e-26 MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKVKDKLHLSVMSEVNRQV MRLQTEMA >gi|299856446|gb|ADWV01000005.1| GENE 4 2369 - 2926 708 185 aa, chain + ## HITS:1 COG:ECs5194 KEGG:ns NR:ns ## COG: ECs5194 COG3054 # Protein_GI_number: 15834448 # Func_class: R General function prediction only # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 183 1 183 184 351 98.0 4e-97 MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGK VRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESN KKLYPWSQFIVDSNGVARGAWQLDEKSSAVVVLDKDGRVQWAKDGALTQEEVQQVMDLLH KLINK >gi|299856446|gb|ADWV01000005.1| GENE 5 2916 - 3656 748 246 aa, chain - ## HITS:1 COG:cysQ KEGG:ns NR:ns ## COG: cysQ COG1218 # Protein_GI_number: 16132036 # Func_class: P Inorganic ion transport and metabolism # Function: 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase # Organism: Escherichia coli K12 # 1 246 1 246 246 476 99.0 1e-134 MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDIP VLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVM NVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGS SLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPG FRVSIY >gi|299856446|gb|ADWV01000005.1| GENE 6 3846 - 5789 2102 647 aa, chain + ## HITS:1 COG:cpdB KEGG:ns NR:ns ## COG: cpdB COG0737 # Protein_GI_number: 16132035 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Escherichia coli K12 # 1 647 1 647 647 1264 99.0 0 MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLIN DARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFN YGLDYLKNALAGAKFPYVNANVIDAKTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIGVV PPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADLVVVLAHSGLSADPYKVMAENS VYYLSEIPGVDAIMFGHAHAVFPSKDFADIEGADIAKGTLNGVPAVMPGMWGDHLGVVDL QLSNDSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSA DNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQSDPDLAKLPVLSAAAPFKVGGRKNDPAS YVEVEKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLIN WDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFLVA TNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPIAG DKKLDIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQVDLSK >gi|299856446|gb|ADWV01000005.1| GENE 7 5918 - 6388 439 156 aa, chain - ## HITS:1 COG:ytfH KEGG:ns NR:ns ## COG: ytfH COG1733 # Protein_GI_number: 16132034 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 156 1 156 156 305 100.0 2e-83 MGSLHRFVLCLNTLTPKLTFSKYVQKGKYEMSQVSLSQQLKEGNLFAEQCPSREVLKHVT SRWGVLILVALREGTHRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEY SLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA >gi|299856446|gb|ADWV01000005.1| GENE 8 6387 - 7247 859 286 aa, chain + ## HITS:1 COG:ytfG KEGG:ns NR:ns ## COG: ytfG COG0702 # Protein_GI_number: 16132033 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 286 1 286 286 466 98.0 1e-131 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALT SALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIE TEKMLADSGIVYTLLRNGWYTENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAAR VISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKSVTYQNLSEADFAAALKSVGLPDGL ADMLADSDVGASKGGLFDNSKTLSKLIGRPTTTLAESVSHLFNVNN >gi|299856446|gb|ADWV01000005.1| GENE 9 7355 - 8320 952 321 aa, chain + ## HITS:1 COG:ECs5188 KEGG:ns NR:ns ## COG: ECs5188 COG0697 # Protein_GI_number: 15834442 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 321 4 324 324 553 98.0 1e-157 MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLIALPIAWLGRVRLRQLA RRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLPVVIPVFANLLYSQRDGKL AWGKLAPALICIGIGLASVNIAELNHGLPDFDWARYTSGIVLALVSVVCWAWYALRNARW LRENPDKHPMMWATAQALVTLPVSLIGYLVACYWLNIQTPDFSLPFGPRPLVFISLMVAI AVLCSWVGALCWNVASQRLPTVILGPLIVFETLAGLLYTFLLRQQMPPLMTLSGIALLVI GVVIAVRAKPEKPLTESVSES >gi|299856446|gb|ADWV01000005.1| GENE 10 8428 - 9090 936 220 aa, chain + ## HITS:1 COG:ytfE KEGG:ns NR:ns ## COG: ytfE COG2846 # Protein_GI_number: 16132031 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Regulator of cell morphogenesis and NO signaling # Organism: Escherichia coli K12 # 1 220 1 220 220 424 100.0 1e-119 MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARKELDVEVIEAELAKLAE QPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPSVPKGLTKYLT MLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEHDEAGELLEVIKHTTNNVTPP PEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALAGE >gi|299856446|gb|ADWV01000005.1| GENE 11 9135 - 10547 1436 470 aa, chain - ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 470 1 470 470 851 100.0 0 MVDQVKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVY MIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVV AITAYAQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGL VMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKD PEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVIN FVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVV MLYVNPSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCW VCMAFFVFVVVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRAAELRK >gi|299856446|gb|ADWV01000005.1| GENE 12 10856 - 11476 976 206 aa, chain - ## HITS:1 COG:ECs5185 KEGG:ns NR:ns ## COG: ECs5185 COG0545 # Protein_GI_number: 15834439 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Escherichia coli O157:H7 # 1 206 54 259 259 394 99.0 1e-110 MTTPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIADALEGKHPAVPVDVVHR ALREIHERADAVRRQRFQAMAAEGVKYLEENAKKEGVNSTESGLQFRVINQGEGAIPART DRVRVHYTGKLIDGTVFDSSVARGESAEFPVNGVIPGWIEALTLMPVGSKWELTIPQELA YGERGAGASIPPFSTLVFEVELLEIL >gi|299856446|gb|ADWV01000005.1| GENE 13 11695 - 12333 544 212 aa, chain + ## HITS:1 COG:ytfB KEGG:ns NR:ns ## COG: ytfB COG3061 # Protein_GI_number: 16132028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell envelope opacity-associated protein A # Organism: Escherichia coli K12 # 1 212 13 224 224 363 100.0 1e-100 MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVT REAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQP DSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGAGKPLSNLQNGQMVKIRQN ASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR >gi|299856446|gb|ADWV01000005.1| GENE 14 12317 - 12964 503 215 aa, chain - ## HITS:1 COG:ytfA KEGG:ns NR:ns ## COG: ytfA COG1309 # Protein_GI_number: 16132027 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 108 215 1 108 108 210 99.0 2e-54 MYLDTSNVQSLKEKLLLCAVNEFAEYGYEGARVDNIVKAAGCSKQTVYHHFGNKENLFIE VLEYTWNDIRQKEKALDFSDLPPQKAIEKIIDFTWDYYIANPWFLKIVHSENQSKGVHYA KSQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVY HISMVSPQALEARRKVIKETILSWLLVDPSSTAHE >gi|299856446|gb|ADWV01000005.1| GENE 15 13177 - 13968 940 263 aa, chain + ## HITS:1 COG:mlr3057 KEGG:ns NR:ns ## COG: mlr3057 COG1028 # Protein_GI_number: 13472685 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mesorhizobium loti # 4 263 2 253 253 206 43.0 5e-53 MKSTRPVAVITGAARGIGKGCALELARGGFNLLINDLPDADSVEKLHITQQECIAEGVEV ICFPADVGDLSLHEEMLDAAQNQWGRLDCLLNNAGISVKKRGDLLDLEPDSFDQNIAINT RAPFFLAQAFSKRLLAQPKPEAELPHRSIIFVSSINAIMLAMNRGEYTIAKTAVSAAARL FAARLCNEQIGVYEVRPGLIKTDMTIPATAYYDELIAKGLVPWGRWGYPADIASTVRAMA EGKLIYTCGQAVAIDGGLSMPRF >gi|299856446|gb|ADWV01000005.1| GENE 16 13978 - 14820 803 280 aa, chain + ## HITS:1 COG:SMc04130 KEGG:ns NR:ns ## COG: SMc04130 COG1082 # Protein_GI_number: 15963875 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Sinorhizobium meliloti # 11 280 6 274 274 271 50.0 7e-73 MRDLLQRPDLFSINTATLGYKTPLPAIIDACAARGIGAIAPWRRELQGEDLQQIAHQLAA SNMSVSGLCRSTYYTAPTLAERKLAIDDNRRALDDAAVLNAACYMQVVGGLPTGTKDLYE AREQVKQGIRQLLPHSKDVGVPIALEPLHPMTAADRSCLCTLRQALDWCDELDPDGEFGL GVAVDVYHVWWDPDLASQILRAGKRILAFHVSDWLVPTTDLVNDRGMPGDGVINIPSIRR LVENAGFNGAIELEIFSPYWWQKDINSTLDISVDRIAHYC >gi|299856446|gb|ADWV01000005.1| GENE 17 14830 - 15606 745 258 aa, chain + ## HITS:1 COG:AF2273_2 KEGG:ns NR:ns ## COG: AF2273_2 COG1024 # Protein_GI_number: 11499854 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Archaeoglobus fulgidus # 16 255 17 259 262 164 34.0 2e-40 MSDQPVLFSRVAASCRLTLNREDKCHAINEEMIESLDHYLNEIENDTTLRLVELTATGDK FFCAGGDIKSWSAYSPLDMGRKWIKRGNDVFNRLRNIPQLTVANLNGHTIGGGIELALCC DIRIARPGAKFSNPEVMLGMVPGWMGIERVLNQVGPVVGRQMLMLGKRLTAQEAQAANLI DEVVEKEQVESWMANQLAQLEKCGPVALAHIKQLILALENKHADYPHQLLAGLMSATQDC QQATRAFAEKSSVSFHNQ >gi|299856446|gb|ADWV01000005.1| GENE 18 15616 - 17157 1695 513 aa, chain + ## HITS:1 COG:BH3898 KEGG:ns NR:ns ## COG: BH3898 COG4670 # Protein_GI_number: 15616460 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase # Organism: Bacillus halodurans # 3 507 4 507 525 412 46.0 1e-114 MRKITTAEALAAQIQDGATIAISGNGGGMVEADHILAAIEARFLQTGHPRYLTLIHSLGI GDRDCKGTNRFAHAEMLKRIIAGHFTWSPKMQALVKNNTIEAYCFPGGVIQALLREIGAG RPGLFTHVGLGSFVDPRNGGGKSNECTTDELVELIEIDGETKLRYRPFKVDYAILRGTYA DPRGNVSLEEEAIDMDSYSMALAAHNSGGKVFVQVRDVLEAGAIEPRRVKLPGILVDGIV EHREQPQTYLGGYDLTISGQHRRLSSNDAIELVSHPVRRLIARRAARELVAGASTNFGFG IPGGIPGVALREGVPYQSLWLSVEQGVHNGMMLDDAFFGCARNADAIIPSLDQFEFYSGG GIDITFLGMGEMDQYGNVNVSHLNGNLIGPGGFLEIAQNARKVVFCGTFDAKGSKIDVTP DGLHITQSGQIPKLVTQVEKITFSAAYAQQSGQEVLYITERAVFQLTAEGVELIEIAPGV EIERDILPYMAFRPIIKHPRLMESSLFTPMEDA >gi|299856446|gb|ADWV01000005.1| GENE 19 17154 - 19235 1423 693 aa, chain + ## HITS:1 COG:TM0427 KEGG:ns NR:ns ## COG: TM0427 COG1053 # Protein_GI_number: 15643193 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Thermotoga maritima # 29 689 5 664 664 357 35.0 3e-98 MSQLDDTILDALTHVTFPKGFAQAEPAWVVTVDGVDYPLWQTDALVVGSGAAGLRAAVEL KRRQQNVLIATAGLYMGTSACSGSDKQTLFTAATAGNGDNFTKLAEALASGGAMDHDTAY VEAVGSLHTLGGLQYLGLELPEDRYGAILRYQTDHDEAGRATSCGPRTSRLMVKVLLEEV QRLAIPVLTSATVIKLLHQRDENGEDRVAGAILATGHRAHNPWGLAIVTAPNVVLATGGP GELYRDSVYPHKCFGSLGLALEEGLTLTNLTESQFGIGTPRSTFPWNLSGTYVQVIPYIY SVDAEGNEYNFLADYYRTTQELASNIFRKGYQWPFHATRVMDFGSSLLDMAVAQEQQSGR QVFMDFNRNPEAVPGDLPFSLDRLDDDVRAYLENNDALAPSPIERLQRMNPLSISLYKMH GYDLTTQPLQFAMNNQHMNGGIEVDIWGQTSLPGCFAVGEVAGTHGVTRPGGAALNAGQV FAVRLARFIGCTQKRNINGDIAQLVAPTLASIREIITQAHDNGTGMPLSVVREKIQARMS DHAGFICHADKVRRATRDALLLSEFVQRHGLAIKHVGEVAELFMWRHMALTSAAVLTQLT HYIDAGGGSRGARIILDRDGNSIPQTRNGFCDAWRFRSERTEDKKDKLLIHYCNGIFHVR ETPVREFPIIRGIWFEKNWPGFLNGTIYQPQDE >gi|299856446|gb|ADWV01000005.1| GENE 20 19256 - 19732 268 158 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020580|ref|YP_526407.1| ribosomal protein S3 [Saccharophagus degradans 2-40] # 1 148 1 148 164 107 37 3e-22 MRNIIRSINALLAALNITILAIIVACVTWQVAARFIFTSPSIFTDELSRLLFICLGLFGG AYTAGQNRHLAIDLLPMMLKGKARRHLFLCIQIIVIIFATIIMVYGGGLLTMDTFDSGQT SPALGWQMGYIYMSIPISGVLIIIYTIDMVLTELKQPL >gi|299856446|gb|ADWV01000005.1| GENE 21 19775 - 21076 1260 433 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126646729|ref|ZP_01719239.1| Ribosomal protein L16 [Algoriphagus sp. PR1] # 5 432 4 430 431 489 55 1e-137 MDYWLPIIVLFGAFFFMLALGVPIVYAIGLSTLASISTQLDFNSALSVVSQKLASGLDSF TLLAIPFFILSGNIMNHGGIARRLINFARILGGRLPGSLAHCNILANMLFGAISGSAVAS AAAMGGVMHPQQVKEGYDPAFSTAVNVASAPTGLLIPPSNTLIVYSLVSGGTSIAALFLA GYVPGILLGLALMVIAGIIAVRRGYPKPERPTLRQAGVAIWMAIPSIFLIILIMGGVLSG IFTPTEASAIAVIYTLFLALVLYREISVKDLPKIFLESVITTAIVLLLIGSSMGMSWAMS NADVPFLILDLLNTISDNPIIILLIINIILLIIGTFMDMTPAVLIFTPIFLPVVTELGMD PIHFGIVMVLNMCIGICTPPVGSVLFVGCSVSKLPINKIIKPMLPFYAVMVLVLAMVTYI PQISMALPRALGY >gi|299856446|gb|ADWV01000005.1| GENE 22 21129 - 22100 687 323 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149199369|ref|ZP_01876406.1| Ribosomal protein L22 [Lentisphaera araneosa HTCC2155] # 24 316 48 339 346 269 43 8e-71 MKIKVSAGIIGAVLMLSASQSWAVTLKLSHNQDKSHPVHKAMEFFAKKSKEYSNGDITIR IYPNGTLGTQRETMELIRSGAIPLVKTNAAEMEAFENSYKLFSLPYLFRDRDHYYQVMQG DIGRKILDSTKSKGYFGLTFYDGGARSFYGNKPVLKPDDLKGMKVRVQPSPGAVEMIKVM GGNPTPLDYGELYTALQQGVVDMAENSVMALTTMRHGEVAKSFSLDEHTMVPDVVLMSNA AFDKLSPENQAVILKAAKESMSYMKDLWSEEEKQEFAKLDKMGVKVYQVDKAPFIEKVQP MYANFAKDNPALAPMLADIQAAK >gi|299856446|gb|ADWV01000005.1| GENE 23 22212 - 22661 720 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15804792|ref|NP_290833.1| 50S ribosomal protein L9 [Escherichia coli O157:H7 EDL933] # 1 149 1 149 149 281 100 1e-74 MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAE VLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNG VLRTTGEHEVSFQVHSEVFAKVIVNVVAE >gi|299856446|gb|ADWV01000005.1| GENE 24 22703 - 22930 385 75 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15834432|ref|NP_313205.1| 30S ribosomal protein S18 [Escherichia coli O157:H7 str. Sakai] # 1 75 1 75 75 152 100 9e-36 MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIK RARYLSLLPYTDRHQ >gi|299856446|gb|ADWV01000005.1| GENE 25 23256 - 23651 680 131 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|221800783|ref|NP_418621.2| 30S ribosomal subunit protein S6 [Escherichia coli str. K-12 substr. MG1655] # 1 131 1 131 135 266 100 5e-70 MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV LMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANET ADDAEAGDSEE >gi|299856446|gb|ADWV01000005.1| GENE 26 23978 - 24253 230 91 aa, chain + ## HITS:1 COG:no KEGG:LF82_3468 NR:ns ## KEGG: LF82_3468 # Name: yjfY # Def: UPF0379 protein YjfY # Organism: E.coli_LF82 # Pathway: not_defined # 1 91 1 91 91 141 100.0 6e-33 MFSRVLALLAVLLLSANTWAAIEINNHQARNMDDVQSLGVIYINHNFATESEARQALNEE TDAQGATYYHVILMREPGSNGNMHASADIYR >gi|299856446|gb|ADWV01000005.1| GENE 27 24382 - 25068 787 228 aa, chain - ## HITS:1 COG:ECs5174 KEGG:ns NR:ns ## COG: ECs5174 COG0235 # Protein_GI_number: 15834428 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 469 100.0 1e-132 MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKADDMVVVDM SGKVVEGEYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYF FGDIPCTRGLSEEEVQGEYELNTGKVIIETLGNAEPLHTPGIVVYQHGPFAWGKDAHDAV HNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRKHGPNAYYGQK >gi|299856446|gb|ADWV01000005.1| GENE 28 25068 - 25922 1089 284 aa, chain - ## HITS:1 COG:ECs5173 KEGG:ns NR:ns ## COG: ECs5173 COG3623 # Protein_GI_number: 15834427 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 582 100.0 1e-166 MLSKQIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLAL VNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYD VYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWF QLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLK QSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMAKAGMVEAA >gi|299856446|gb|ADWV01000005.1| GENE 29 25932 - 26582 889 216 aa, chain - ## HITS:1 COG:ECs5172 KEGG:ns NR:ns ## COG: ECs5172 COG0269 # Protein_GI_number: 15834426 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 420 100.0 1e-117 MSLPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVL ADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWTWE QAQQWRDAGIQQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALEDLPLF KGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELWG >gi|299856446|gb|ADWV01000005.1| GENE 30 26596 - 27060 601 154 aa, chain - ## HITS:1 COG:ECs5171 KEGG:ns NR:ns ## COG: ECs5171 COG1762 # Protein_GI_number: 15834425 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 287 96.0 5e-78 MKLRDSLAENKSIRLQAEAETWQDAVKIGVDLLVAADVVEPRYYQAILDAVEQHGPYFVL APGLAMPHGRPEEGVKKTGFALVTLKKPLEFNHEDNDPVDILITMAAVDANTHQEVGIMQ IVNLFEDEENFDRLRACRTEQEVLDLIDRTNAAA >gi|299856446|gb|ADWV01000005.1| GENE 31 27070 - 27375 354 101 aa, chain - ## HITS:1 COG:ECs5170 KEGG:ns NR:ns ## COG: ECs5170 COG3414 # Protein_GI_number: 15834424 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Escherichia coli O157:H7 # 1 101 1 101 101 194 99.0 3e-50 MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELSGADIIIASTHI AGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKAHFPQDVK >gi|299856446|gb|ADWV01000005.1| GENE 32 27391 - 28788 1730 465 aa, chain - ## HITS:1 COG:sgaT KEGG:ns NR:ns ## COG: sgaT COG3037 # Protein_GI_number: 16132015 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 465 20 484 484 806 99.0 0 MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSG ILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVL LRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKP TQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVM TIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNG ISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPM FFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPM MQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQSA >gi|299856446|gb|ADWV01000005.1| GENE 33 29143 - 30207 1143 354 aa, chain + ## HITS:1 COG:ECs5168 KEGG:ns NR:ns ## COG: ECs5168 COG2220 # Protein_GI_number: 15834422 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Escherichia coli O157:H7 # 1 354 3 356 356 752 100.0 0 MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCV DFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHN DHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHAL DAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNEH QIDVALGSYGENPRGITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWE MKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHYPRGFDDCFTIEPDLPFKSFL >gi|299856446|gb|ADWV01000005.1| GENE 34 30315 - 31070 778 251 aa, chain + ## HITS:1 COG:ECs5167 KEGG:ns NR:ns ## COG: ECs5167 COG1349 # Protein_GI_number: 15834421 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 481 99.0 1e-136 MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLDESGKLRKVRNGAEAIT QQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCGSTAFLLGREMCGKPVQII TNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSENSLYAGHWMFTSGKGLTAEGL YKTDMLTAMAEQKMLSVVGKLVVLVDSSKIGERAGMLFSRADQIDMLITGKNANPEILQQ LEAQGVSILRV >gi|299856446|gb|ADWV01000005.1| GENE 35 31067 - 31816 618 249 aa, chain - ## HITS:1 COG:yjfP KEGG:ns NR:ns ## COG: yjfP COG1073 # Protein_GI_number: 16132012 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli K12 # 1 249 1 249 249 498 99.0 1e-141 MIEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSYFAVALAQAGLRVIMP DAPDHGSRFSGDAARRLNQFWQILLQSMQEFTTLRAAIAEENWLLDDRLAVGGASMGAMT ALGITARHPTVKCTASMMGSGYFTSLARSLFPPLIPETAAQQNEFNNIVAPLAEWEATNH LEQLGDRPLLLWHGLDDDVVPADESLRLQQALSETGRDKLLTCSWQPGVRHRITPEALDA AVTFFRQHL >gi|299856446|gb|ADWV01000005.1| GENE 36 31998 - 32327 187 109 aa, chain + ## HITS:1 COG:no KEGG:APECO1_2203 NR:ns ## KEGG: APECO1_2203 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 109 34 142 142 201 100.0 5e-51 MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTDHPQEIRRDQTQGLQRIGSVS TMVRGSPDDALAEIRAKAVAAKADYYVVVMVDETIVTGQWYSQAILYRK >gi|299856446|gb|ADWV01000005.1| GENE 37 32464 - 32751 229 95 aa, chain + ## HITS:1 COG:no KEGG:SSON_4370 NR:ns ## KEGG: SSON_4370 # Name: yjfN # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 95 6 100 100 172 100.0 2e-42 MELTMKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERI VALKADEQGASWYRIITMYEDQQPDNWRVQAILYA >gi|299856446|gb|ADWV01000005.1| GENE 38 32868 - 34493 1195 541 aa, chain - ## HITS:1 COG:aidB KEGG:ns NR:ns ## COG: aidB COG1960 # Protein_GI_number: 16132009 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli K12 # 1 541 6 546 546 1102 99.0 0 MHWQTHTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLELGR LANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEEDARSGAFVARAAR FMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQKRGLLI GMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFSVPQSDAHLVLAQTTGGLSCFFV PRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGQEGEGIRLILKMGGMTRF DCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLAR AWDRRADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPV NSIWEGSGNIMCLDVLRVLNKQAGVYDLLSEAFVEVKGQDRYFDRAVRRLQQQLRKPAEE LRREITHQLFLLGCGAQMLKYASPPMAQAWCQVMLDTRGGVRLSEQIQNDLLLRATGGVC V >gi|299856446|gb|ADWV01000005.1| GENE 39 34577 - 35740 1083 387 aa, chain - ## HITS:1 COG:ECs5162 KEGG:ns NR:ns ## COG: ECs5162 COG0754 # Protein_GI_number: 15834416 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Escherichia coli O157:H7 # 1 387 1 387 387 796 99.0 0 MLRHNVPVRRDLDQIAADNGFDFHIIDNEIYWDESRAYRFTLRQIEEQIEKPTAELHQMC LEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRMDFAWCGNAPVKLLEYNAD TPTSLYESAYFQWLWLEDARRSGIIPRDADQYNAIQERLISRFSELYSREPFYFCCCQDT DEDRTTVLYLQDCAQQAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRD DNGPLLCKRREQWVEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFEGEKSQIAAGESYV RKPIYSREGGNVTIFDGQNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDE ACGMGIREDNTLITKDTSRFVPHYIAG >gi|299856446|gb|ADWV01000005.1| GENE 40 35743 - 36381 324 212 aa, chain - ## HITS:1 COG:yjfM KEGG:ns NR:ns ## COG: yjfM COG5463 # Protein_GI_number: 16132007 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 212 1 212 212 374 94.0 1e-104 MARKRKSRNNSKIGHGAISRIGRPHNPFEPRRNRYAQKYLTLVLMGGAVFLIVKGWSESS DVDNDGDGTFYSTVQDCIDDGNNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYY DNVEQSWIPVISGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRSTSGDYSWRSGSGKKE SYSSGGFTTKKASTVSRGGYGRSSSARGHWGG >gi|299856446|gb|ADWV01000005.1| GENE 41 36391 - 36789 368 132 aa, chain - ## HITS:1 COG:ECs5160 KEGG:ns NR:ns ## COG: ECs5160 COG3766 # Protein_GI_number: 15834414 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 132 1 132 132 220 100.0 6e-58 MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNNTAASLAFSGTLLGYVI PLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSEKIINHNTAAGMFMGTAAL AGGIFNAACMTW >gi|299856446|gb|ADWV01000005.1| GENE 42 36807 - 37466 707 219 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4976 NR:ns ## KEGG: ECO103_4976 # Name: yjfK # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 219 1 219 219 422 100.0 1e-117 MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSH IDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAK VMGAMILNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHAKWEVHNFTMGYQRQVTEDT YEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG >gi|299856446|gb|ADWV01000005.1| GENE 43 37517 - 38215 942 232 aa, chain - ## HITS:1 COG:yjfJ KEGG:ns NR:ns ## COG: yjfJ COG1842 # Protein_GI_number: 16132004 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Escherichia coli K12 # 1 232 1 232 232 291 100.0 7e-79 MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDKAGKSRVDLLARVKLSH DKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLENLITAEEQVLSNLEVSRDG VEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQ AERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE >gi|299856446|gb|ADWV01000005.1| GENE 44 38234 - 38635 343 133 aa, chain - ## HITS:1 COG:ECs5157 KEGG:ns NR:ns ## COG: ECs5157 COG3789 # Protein_GI_number: 15834411 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 228 99.0 2e-60 MTWNPLALATALQTVPEQNIDVTNSESALIIKMNDYGDLQINILFTSRQMIIETFICPVS SISNPDEFNTFLLRNQKMMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEITSLVDN ALDLAEITEEYSH >gi|299856446|gb|ADWV01000005.1| GENE 45 38762 - 39493 455 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 3 242 7 246 255 179 40 7e-44 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR QRS >gi|299856446|gb|ADWV01000005.1| GENE 46 39673 - 42114 1249 813 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 21 728 4 705 730 485 37 1e-136 MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVELHIEGEEQLEGLRRRLR AMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIH GDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEAGVGFVVPDDSRLSFDILIPP DQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDIALRTHEIPYIWPQA VEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA DVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLPEVLSNGLCSLNPQVDRLCMVCEMTVS SKGRLTGYKFYEAVMSSHARLTYTKVWHILQGDQDLREQYAPLVKHLEELHNLYKVLDKA REERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAKEP ALFRIHDKPSTEAITSFRSVLAELGLELPGGNKPEPRDYAELLESVADRPDAEMLQTMLL RSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETG GYHYSMEEMLQLGQHCSMAERRADEATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFF VRLDDLFIDGLVHVSSLDNDYYRFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKI DFSLISSERAPRNVGKTAREKAKKGDAGKKGGKRRQVGKKVNFEPDSAFRGEKKTKPKAA KKDARKAKKPSAKTQKIAAATKAKRAAKKKVAE >gi|299856446|gb|ADWV01000005.1| GENE 47 42153 - 42506 248 117 aa, chain - ## HITS:1 COG:ECs5154 KEGG:ns NR:ns ## COG: ECs5154 COG1959 # Protein_GI_number: 15834408 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 117 25 141 141 227 99.0 5e-60 MTSISEVTDVYGVSRNHMVKIINQLSRAGYVTAVRGKNGGIRLGKSASAIRIGDVVRELE PLSLVNCSSEFCHITPACRLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE >gi|299856446|gb|ADWV01000005.1| GENE 48 42783 - 44081 1450 432 aa, chain - ## HITS:1 COG:ECs5153 KEGG:ns NR:ns ## COG: ECs5153 COG0104 # Protein_GI_number: 15834407 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 867 100.0 0 MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGI LRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREK ARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVMEYHNFQLVNYYKAE AVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVT SSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGA TTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTP LAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDR TETMILRDPFDA >gi|299856446|gb|ADWV01000005.1| GENE 49 44185 - 44382 234 65 aa, chain - ## HITS:1 COG:ECs5152 KEGG:ns NR:ns ## COG: ECs5152 COG3242 # Protein_GI_number: 15834406 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 65 1 65 65 80 100.0 6e-16 MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRRFGGGLVVAGVVVYYML RKTIG >gi|299856446|gb|ADWV01000005.1| GENE 50 44464 - 45468 1392 334 aa, chain - ## HITS:1 COG:ECs5151 KEGG:ns NR:ns ## COG: ECs5151 COG0330 # Protein_GI_number: 15834405 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 566 100.0 1e-161 MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIE TVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLLK RKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVTTPAADNAIAEAAE RVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRHRS QGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFYAFIRSL RAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR >gi|299856446|gb|ADWV01000005.1| GENE 51 45471 - 46730 1494 419 aa, chain - ## HITS:1 COG:ECs5150 KEGG:ns NR:ns ## COG: ECs5150 COG0330 # Protein_GI_number: 15834404 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Escherichia coli O157:H7 # 1 419 1 419 419 671 99.0 0 MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDIFRKLSKKLGGLGGGKG TGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKEAERGVVTRFGKFSHLVEP GLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVEMNVQYRVTNPEKYLYSVTSP DDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIRPYDMGITLLDVNFQA ARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKAQTILE AQGEVARFAKLLPEYKAAPEITRERLYIETMEKVLGNTRKVLVNDKGGNLMVLPLDQMLK GGNAPAAKSDNGTSNLLRLPPASSSTTSGASNTSSTSQGDIMDQRRANAQRNDYQRQGE >gi|299856446|gb|ADWV01000005.1| GENE 52 46816 - 48096 733 426 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 50 398 55 407 425 286 46 4e-76 MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGE GKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEG KLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLER VEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRID VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNT VLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPIRVWLSAQTGAGIPQLFQALTER LSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQVRMPIVDWRRLCKQEPA LIDYLI >gi|299856446|gb|ADWV01000005.1| GENE 53 48173 - 48481 331 102 aa, chain - ## HITS:1 COG:ECs5148 KEGG:ns NR:ns ## COG: ECs5148 COG1923 # Protein_GI_number: 15834402 # Func_class: R General function prediction only # Function: Uncharacterized host factor I protein # Organism: Escherichia coli O157:H7 # 1 102 1 102 102 177 100.0 5e-45 MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS TVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE >gi|299856446|gb|ADWV01000005.1| GENE 54 48567 - 49472 588 301 aa, chain - ## HITS:1 COG:miaA KEGG:ns NR:ns ## COG: miaA COG0324 # Protein_GI_number: 16131993 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Escherichia coli K12 # 1 301 16 316 316 580 100.0 1e-165 MGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDP SQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQ QAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPY QVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMW SYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIA G >gi|299856446|gb|ADWV01000005.1| GENE 55 49510 - 51357 1743 615 aa, chain - ## HITS:1 COG:mutL KEGG:ns NR:ns ## COG: mutL COG0323 # Protein_GI_number: 16131992 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Escherichia coli K12 # 1 615 1 615 615 1160 99.0 0 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQLTPGEAPVC AQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQSDAQHVTIRAVPLPLRQQNLQILIP ELIGYLAKQSVFEPGNIAQWIARNLMSEHAQWSMAQAITLLADVERLCPQLVKTPPGGLL QSVDLHPAIKALKDE >gi|299856446|gb|ADWV01000005.1| GENE 56 51367 - 52704 1052 445 aa, chain - ## HITS:1 COG:amiB KEGG:ns NR:ns ## COG: amiB COG0860 # Protein_GI_number: 16131991 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli K12 # 1 445 1 445 445 816 99.0 0 MMYRIRNWLVATLLLLCTPVGAATLSDIQVSNGNQQARITLSFIGDPDYAFSHQSKRTVA LDIKQTGVIQGLPLLFSGNNLVKAIRSGTPKDAQTLRLVVDLTENGKTEAVKRQNGSNYT VVFTINADAPPPPPPPPVVAKRVETPAVVAPRVSEPARNPFKTESNRTTGVISSNTVTRP AARATANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDDPMFKGVL TRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRSATGASVWVLSNRRANSEMASWLE QHEKQSELLGGAGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEIHK RRPEHASLGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNYFLAHP MQSAPQGATAQTASTVTTPDRTLPN >gi|299856446|gb|ADWV01000005.1| GENE 57 52723 - 53184 495 153 aa, chain - ## HITS:1 COG:ECs5144 KEGG:ns NR:ns ## COG: ECs5144 COG0802 # Protein_GI_number: 15834398 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 313 100.0 1e-85 MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTFSRGFLQALGHQGNVKS PTYTLVEPYTLDNLMVYHFDLYRLADPEELEFMGIRDYFANDAICLVEWPQQGTGVLPDP DVEIHIDYQAQGREARVSAVSSAGELLLARLAG >gi|299856446|gb|ADWV01000005.1| GENE 58 53156 - 54688 1044 510 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|153825000|ref|ZP_01977667.1| ribosomal protein S15 [Vibrio cholerae MZO-2] # 8 494 3 490 490 406 43 1e-112 MKKNPVSIPHTVWHADDIRRGEREAADALGLTLYELMLRAGEAAFQVCRSAYPDARHWLV LCGHGNNGGDGYVVARLATAVGIEVTLLAQESDKPLPEEAALAREAWLNAGGEIHASNIV WPESVDLIVDALLGTGLQQAPRESISQLIDHANSHPAPIAAVDIPSGLLAETGATPGAVI NADHTITFIALKPGLLTGKARDVTGQLHFDSLGLDSWLAGQETKIQRFSAEQLSHWLKPR RPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRAGAGLVRVLTRSENIAPLLTARPELM VHELTMDSLTESLEWADVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPD KRHNRVITPHPGEAARLLGCSVAEIESDRLHCAKRLVQRYGGVAVLKGAGTVVAAHPDAL GIIDAGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVAHGAAADVLAARFGTRGM LATDLFSTLQRIVNPEVTDKNHDESSNSAP >gi|299856446|gb|ADWV01000005.1| GENE 59 54702 - 55841 919 379 aa, chain + ## HITS:1 COG:yjeS KEGG:ns NR:ns ## COG: yjeS COG1600 # Protein_GI_number: 16131988 # Func_class: C Energy production and conversion # Function: Uncharacterized Fe-S protein # Organism: Escherichia coli K12 # 1 379 1 379 379 784 100.0 0 MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWLDKQYHGEMDWMARHGM LRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVSRYALGRDYHKLLRNRLKK LGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKHSLILNREAGSFFFLGELLVD IPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEELRPLMG NRIYGCDDCQLICPWNRYSQLTTEEDFSPRKPLHAPELIELFAWSEEKFLKVTEGSAIRR IGHLRWLRNIAVALGNAPWDETILTALESRKGEHPLLDEHIAWAIAQQIERRNACIVEVQ LPKKQRLVRVIEKGLPRDA >gi|299856446|gb|ADWV01000005.1| GENE 60 56620 - 57165 785 181 aa, chain - ## HITS:1 COG:orn KEGG:ns NR:ns ## COG: orn COG1949 # Protein_GI_number: 16131987 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Escherichia coli K12 # 1 181 24 204 204 367 100.0 1e-102 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK L >gi|299856446|gb|ADWV01000005.1| GENE 61 57260 - 58312 1010 350 aa, chain + ## HITS:1 COG:ECs5140 KEGG:ns NR:ns ## COG: ECs5140 COG1162 # Protein_GI_number: 15834394 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Escherichia coli O157:H7 # 14 350 1 337 337 692 99.0 0 MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGD VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIA ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIY RNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVS DNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYR DCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD >gi|299856446|gb|ADWV01000005.1| GENE 62 58409 - 59377 1048 322 aa, chain + ## HITS:1 COG:ECs5139 KEGG:ns NR:ns ## COG: ECs5139 COG0688 # Protein_GI_number: 15834393 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Escherichia coli O157:H7 # 1 322 1 322 322 664 100.0 0 MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTASY RTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAG NYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFA RNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVA LLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSVTKIGQPLAVSTETFVTPDAEPAPL PAEEIEAEHDASPLVDDKKDQV >gi|299856446|gb|ADWV01000005.1| GENE 63 59399 - 62722 3456 1107 aa, chain + ## HITS:1 COG:ECs5138 KEGG:ns NR:ns ## COG: ECs5138 COG3264 # Protein_GI_number: 15834392 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 1107 1 1107 1107 2057 99.0 0 MRLIITFLMAWCLSWGAYAATAPDSKQISQELEQAKAAKPAQPEVVEALQSALNALEERK GSLERIKQYQEVIDNYPKLSATLRAQLNNMRDEPRSVSPGMSTDALNQEILQVSSQLLDK SRQAQQEQERAREIADSLNQLPQQQTDARRQLNEIERRLGTLTGNTPLNQAQNFALQSDS ARLKALVDELELAQLSANNRQELARLRSELAEKESQQLDAYLQALRNQLNSQRQLEAERA LESTELLAENSADLPKDIVAQFKINRELSAALNQQAQRMDLVASQQRQATSQTLQVRQAL NTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQQLDTEMAQLRVQRLRYEDLLNKQPLL RQIHQADGQPLTAEQNRILEAQLRTQRELLNSLLQGGDTLLLELTKLKVSNGQLEDALKE VNEATHRYLFWTSDVRPMTIAWPLEIAQDLRRLISLDTFSQLGKASVMMLTSKETILPLF GALILVGCSIYSRRYFTRFLERSAAKVGKVTQDHFWLTLRTLFWSILVASPLPVLWMTLG YGLREAWPYPLAVAIGDGVTATVPLLWVVMICATFARPNGLFIAHFGWPRERVSRGMRYY LMSIGLIVPLIMALMMFDNLDDREFSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKE GSGDNITNHMLWNMMIGAPLVAILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRR WMLIQRRRLAFDRAKHRRAEMLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLR LVRSILMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILV FIITTQLVRNLPALLELAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKL QWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTIS DWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLV IDNPAPEVFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQ MRLESLNGKQTGRTLTSAGKGRQAGSL >gi|299856446|gb|ADWV01000005.1| GENE 64 62751 - 63065 261 104 aa, chain - ## HITS:1 COG:no KEGG:JW4119 NR:ns ## KEGG: JW4119 # Name: yjeO # Def: conserved inner membrane protein # Organism: E.coli_J # Pathway: not_defined # 1 104 1 104 104 169 100.0 2e-41 MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMT LPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL >gi|299856446|gb|ADWV01000005.1| GENE 65 63062 - 63376 268 104 aa, chain - ## HITS:1 COG:no KEGG:JW4118 NR:ns ## KEGG: JW4118 # Name: yjeN # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 104 1 104 104 211 100.0 5e-54 MDDTSRDPAITEDEIRALQFSAGDVAEIEQTILSFVDACHTRKVAMVVGSTINTLKDRDG KRWGNLPDIYCAYLIRCLVFRGELVGYGDLFRMRYSEIKRPVTL >gi|299856446|gb|ADWV01000005.1| GENE 66 63428 - 64885 1327 485 aa, chain - ## HITS:1 COG:yjeM KEGG:ns NR:ns ## COG: yjeM COG0531 # Protein_GI_number: 16131981 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 485 30 514 514 858 99.0 0 MIFTSVFGFANSPSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRKEEGGIYSWM NNSVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVG LLAVAWMILVTVVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINF LASPNPGYQSGLAMLSFVVFAIFAYGGIEAVGGLVDKTENPEKNFAKGIVFAAIVISIGY SLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMKSLGVTLGNALHLSPEASLSLGVWFARI TGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQCGLVTVF ILLVSFGGGTASAFFNKLTLMANVSMTLPYLFLALAFPFFKARQDLDRPFVIFKTHLSAM IATVVVVLVVTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRVAKNP QWAVE >gi|299856446|gb|ADWV01000005.1| GENE 67 65149 - 66126 1057 325 aa, chain - ## HITS:1 COG:ECs5136 KEGG:ns NR:ns ## COG: ECs5136 COG2269 # Protein_GI_number: 15834390 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Truncated, possibly inactive, lysyl-tRNA synthetase (class II) # Organism: Escherichia coli O157:H7 # 1 325 11 335 335 662 100.0 0 MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRF VGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRP HYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEIDPLSADKTQLREVAAKLDLSN VADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQASLAQISTEDHRVAERFEVYY KGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALG VDRLVMLALGAETLAEVIAFSVDRA >gi|299856446|gb|ADWV01000005.1| GENE 68 66451 - 68259 1986 602 aa, chain + ## HITS:1 COG:frdA KEGG:ns NR:ns ## COG: frdA COG1053 # Protein_GI_number: 16131979 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Escherichia coli K12 # 1 602 1 602 602 1170 100.0 0 MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDH DSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGM KIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGT LVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQYHPTGLPGS GILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR KGNTISTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMG GIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAATAGN GNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGLAMEEGCGIYRTPELMQKTIDKL AELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGC TERDDVNFLKHTLAFRDADGTTRLEYSDVKITTLPPAKRVYGGEADAADKAEAANKKEKA NG >gi|299856446|gb|ADWV01000005.1| GENE 69 68252 - 68986 786 244 aa, chain + ## HITS:1 COG:ECs5134 KEGG:ns NR:ns ## COG: ECs5134 COG0479 # Protein_GI_number: 15834388 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Escherichia coli O157:H7 # 1 244 1 244 244 516 100.0 1e-146 MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYIKDNLAPDLSYRWSCRM AICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRY NEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIAT LKPR >gi|299856446|gb|ADWV01000005.1| GENE 70 68997 - 69392 518 131 aa, chain + ## HITS:1 COG:ECs5133 KEGG:ns NR:ns ## COG: ECs5133 COG3029 # Protein_GI_number: 15834387 # Func_class: C Energy production and conversion # Function: Fumarate reductase subunit C # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 225 100.0 2e-59 MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGF VDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVA TIVILFVALYW >gi|299856446|gb|ADWV01000005.1| GENE 71 69403 - 69762 423 119 aa, chain + ## HITS:1 COG:ECs5132 KEGG:ns NR:ns ## COG: ECs5132 COG3080 # Protein_GI_number: 15834386 # Func_class: C Energy production and conversion # Function: Fumarate reductase subunit D # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 207 99.0 3e-54 MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQ SFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGIVTI >gi|299856446|gb|ADWV01000005.1| GENE 72 69825 - 70958 878 377 aa, chain + ## HITS:1 COG:ECs5131 KEGG:ns NR:ns ## COG: ECs5131 COG1680 # Protein_GI_number: 15834385 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli O157:H7 # 1 377 1 377 377 734 98.0 0 MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYFTWG YADIAKKQPVTQQTLFELGSVSKTFTGVLGGEAIARGEIKLSDPTTKYWPELTAKQWNGI TLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAVK PSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAETYGVK STIEDMACWVRSNMNPRDINDKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSII NGSGNKIALAAHPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNY PNPARVAAAWQILNALQ >gi|299856446|gb|ADWV01000005.1| GENE 73 71047 - 71580 672 177 aa, chain + ## HITS:1 COG:ECs5130 KEGG:ns NR:ns ## COG: ECs5130 COG3040 # Protein_GI_number: 15834384 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Bacterial lipocalin # Organism: Escherichia coli O157:H7 # 1 177 1 177 177 368 100.0 1e-102 MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWYEIARFDHRFERGLEKV TATYSLRDDGGLNVINKGYNPDRGMWQQSEGKAYFTGAPTRAALKVSFFGPFYGGYNVIA LDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSKFIWVQQPGS >gi|299856446|gb|ADWV01000005.1| GENE 74 71577 - 71894 444 105 aa, chain - ## HITS:1 COG:ECs5129 KEGG:ns NR:ns ## COG: ECs5129 COG2076 # Protein_GI_number: 15834383 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 105 51 155 155 160 100.0 4e-40 MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMALLAWAMKSLPVGTAYA VWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKLSTH >gi|299856446|gb|ADWV01000005.1| GENE 75 72076 - 72222 97 48 aa, chain - ## HITS:1 COG:STM4336 KEGG:ns NR:ns ## COG: STM4336 COG5510 # Protein_GI_number: 16767585 # Func_class: S Function unknown # Function: Predicted small secreted protein # Organism: Salmonella typhimurium LT2 # 1 48 1 48 48 62 95.0 2e-10 MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAATKAQQ >gi|299856446|gb|ADWV01000005.1| GENE 76 72510 - 73076 676 188 aa, chain - ## HITS:1 COG:ECs5128 KEGG:ns NR:ns ## COG: ECs5128 COG0231 # Protein_GI_number: 15834382 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 377 100.0 1e-105 MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLRRLLTGTRVEKTFKSTD SAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGDNAKWLLDQAECIVTLWNG QPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRS GEYVSRVK >gi|299856446|gb|ADWV01000005.1| GENE 77 73118 - 74146 917 342 aa, chain + ## HITS:1 COG:yjeK KEGG:ns NR:ns ## COG: yjeK COG1509 # Protein_GI_number: 16131971 # Func_class: E Amino acid transport and metabolism # Function: Lysine 2,3-aminomutase # Organism: Escherichia coli K12 # 1 342 1 342 342 671 98.0 0 MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFI DRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVPGLLHKYHNRALLLVKGGC AVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLT QLEAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAM AKLRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSD DEARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLDLQLRQQ >gi|299856446|gb|ADWV01000005.1| GENE 78 74536 - 75405 822 289 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4941 NR:ns ## KEGG: ECO103_4941 # Name: yjeJ # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 289 1 289 289 555 100.0 1e-156 MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELRDLLIALESRMHQKHKL DAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNTLELTDNQGENLTFVLTLH DGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSLLDFLPLYDVDCQENGNLEYD TYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKTREATPGKEIEAITRRMLDFSPR LKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHLRVQSTSKTAPQAK >gi|299856446|gb|ADWV01000005.1| GENE 79 75598 - 75951 351 117 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_4377 NR:ns ## KEGG: ECIAI1_4377 # Name: yjeI # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 117 1 117 117 198 100.0 6e-50 MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQLIGTATGKQSNWLSGQ HGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFVPTDSQIIGQVYKCPN >gi|299856446|gb|ADWV01000005.1| GENE 80 76089 - 77735 2383 548 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 548 1 547 547 922 87 0.0 MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG MGGMGGMM >gi|299856446|gb|ADWV01000005.1| GENE 81 77779 - 78072 464 97 aa, chain - ## HITS:1 COG:ECs5123 KEGG:ns NR:ns ## COG: ECs5123 COG0234 # Protein_GI_number: 15834377 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Escherichia coli O157:H7 # 1 97 1 97 97 158 100.0 2e-39 MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVK VGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA >gi|299856446|gb|ADWV01000005.1| GENE 82 78348 - 79604 1194 418 aa, chain + ## HITS:1 COG:yjeH KEGG:ns NR:ns ## COG: yjeH COG0531 # Protein_GI_number: 16131966 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 418 1 418 418 702 100.0 0 MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFA ILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSW QLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGDIKPANIPFPAPGN IELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVL HFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQH NPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCML AGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLLLPKRKTPENGITT >gi|299856446|gb|ADWV01000005.1| GENE 83 79620 - 80096 363 158 aa, chain - ## HITS:1 COG:yjeG KEGG:ns NR:ns ## COG: yjeG COG3030 # Protein_GI_number: 16132265 # Func_class: R General function prediction only # Function: Protein affecting phage T7 exclusion by the F plasmid # Organism: Escherichia coli K12 # 1 158 1 158 158 241 100.0 3e-64 MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQ KMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSR MPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD >gi|299856446|gb|ADWV01000005.1| GENE 84 80433 - 81869 1686 478 aa, chain + ## HITS:1 COG:ECs5120 KEGG:ns NR:ns ## COG: ECs5120 COG1027 # Protein_GI_number: 15834374 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Escherichia coli O157:H7 # 1 478 16 493 493 932 100.0 0 MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAM ANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLE LMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSLIKLVDAINQLREGFERKAVE FQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATAIGTGLN TPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRL LSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQ LNVMEPVIGQAMFESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIVTYLNPFIG HHNGDIVGKICAETGKSVREVVLERGLLTEAELDDIFSVQNLMHPAYKAKRYTDESEQ >gi|299856446|gb|ADWV01000005.1| GENE 85 81987 - 83288 1282 433 aa, chain + ## HITS:1 COG:ECs5119 KEGG:ns NR:ns ## COG: ECs5119 COG2704 # Protein_GI_number: 15834373 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 1 433 1 433 433 705 100.0 0 MLVVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGNIPFDVISIIMAVIAAI SAMQVAGGLDYLVHQTEKLLRRNPKYITILAPIVTYFLTIFAGTGNISLATLPVIAEVAK EQGVKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGHGISYLHLLSVVIPSTLLAVL VMSFLVTMLFNSKLSDDPIYRKRLEEGLVELRGEKQIEIKSGAKTSVWLFLLGVVGVVIY AIINSPSMGLVEKPLMNTTNAILIIMLSVATLTTVICKVDTDNILNSSTFKAGMSACICI LGVAWLGDTFVSNNIDWIKDTAGEVIQGHPWLLAVIFFFASALLYSQAATAKALMPMALA LNVSPLTAVASFAAVSGLFILPTYPTLVAAVQMDDTGTTRIGKFVFNHPFFIPGTLGVAL AVCFGFVLGSFML >gi|299856446|gb|ADWV01000005.1| GENE 86 83404 - 83742 287 112 aa, chain + ## HITS:1 COG:ECs5118 KEGG:ns NR:ns ## COG: ECs5118 COG1324 # Protein_GI_number: 15834372 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tolerance to divalent cations # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 198 100.0 2e-51 MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEY EVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR >gi|299856446|gb|ADWV01000005.1| GENE 87 83718 - 85415 1629 565 aa, chain + ## HITS:1 COG:dsbD KEGG:ns NR:ns ## COG: dsbD COG4232 # Protein_GI_number: 16131961 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Escherichia coli K12 # 1 565 1 565 565 1091 98.0 0 MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFTFDFQQNQHDLNLTWQIKDGYYL YRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTLPVTINQASAGATLTVTYQ GCADAGFCYPPETKTVPLSEVVANNAASQPVSVSQQEQHTAQLPFSALWALLIGIGIAFT PCVLPMYPLISGIMLGGKQRLSTARALLLTFIYVQGMALTYTALGLVVAAAGLQFQAALQ HPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIAGLI CSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYALGMGLPLMLITVFGNRLLPKSGPWMEQ VKTAFGFVILALPVFLLERVIGDVWGLRLWSALGVAFFGWAFITSLQAKRGWMRVVQIIL LAAALVSVRPLQDWAFGATHTAQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWC VACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQ EHPQARVTGFMDAETFSAHLRDRQP >gi|299856446|gb|ADWV01000005.1| GENE 88 85452 - 86027 761 191 aa, chain + ## HITS:1 COG:ECs5116 KEGG:ns NR:ns ## COG: ECs5116 COG1309 # Protein_GI_number: 15834370 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 191 9 199 199 368 99.0 1e-102 MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQI DVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQ QKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDILR FARCRQGGALT >gi|299856446|gb|ADWV01000005.1| GENE 89 86407 - 87669 368 420 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 49 401 60 402 406 146 27 8e-34 MALTDAKIRAAKPTDKAYKLTDGAGMFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVS LSEARTKRDEARKLISEGIDPCEQKRVKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKV LKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGI IRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIDSYKGQPVTRLAVMLNLLVFIRSS ELRYARWSEIDIDNAMWTIPAERKPLPGVKFSHRGSKMRTPHLVPLSKQAVAILAELQTW AGENGLIFTGAHDPRKPISENTVNKALRVMGYDTTQEVCGHGFRAMACSALIESGLWSRD AVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANREQCISPFEYAKINNPLK >gi|299856446|gb|ADWV01000005.1| GENE 90 87934 - 88500 213 188 aa, chain - ## HITS:1 COG:ybiP KEGG:ns NR:ns ## COG: ybiP COG2194 # Protein_GI_number: 16128783 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 3 166 341 507 527 102 33.0 3e-22 MQLLQETERALADTSSPKVIFLHMMGSHPNPCDRLNSWPNNYQEQFPRKIACYLASISKL DNFLGQLDGILRWHSRHFAMLYFSDHGLSVSDSTNPVHHDGHVQAGYSVPLIITASDITS HQSVSRKISARHFAGIFQWLTGIRTENIPPFNPLINEDNEPVMVFNGERIVPADGLKSQP VILPGKGK >gi|299856446|gb|ADWV01000005.1| GENE 91 88621 - 89124 232 167 aa, chain - ## HITS:1 COG:yjgX KEGG:ns NR:ns ## COG: yjgX COG2194 # Protein_GI_number: 16132096 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 100 167 3 70 148 114 94.0 1e-25 MIPVYHFLVSAAILVFMVIFWRTHHRGHRNWLALLLFVLCSVNSWPLQIVKGTVVGTTDT LREMQHYKQLSQHGADNWKILPGTPLYDTIVIVTGESVSRDYMSVYGYPVPTTPWLNTAP GLFIDGYTSTAASTVPSLSRTLIYDYEQNPDSGNNVVALAAKAGYST >gi|299856446|gb|ADWV01000005.1| GENE 92 89445 - 90002 286 185 aa, chain - ## HITS:1 COG:VC0817 KEGG:ns NR:ns ## COG: VC0817 COG2801 # Protein_GI_number: 15640835 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Vibrio cholerae # 1 185 141 327 327 271 71.0 4e-73 MDTCKIGPGLYQYTSVDDCTRSRVLRLYSRRTAANTLDFIDCVIEEMPFPIQRLQTDRGR EFFAVKVQEKLKEYSIKFRPNKPASPHLNGKVERSQKTDKAEFYATVDLSTDDLKELLAE WQHYYNWERPHSAHNGKTPMERYFELAEQTPYSDAVHASYQPNEEHIQEQNYKLELELRK LKRCL >gi|299856446|gb|ADWV01000005.1| GENE 93 90200 - 90373 61 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|194429610|ref|ZP_03062129.1| ## NR: gi|194429610|ref|ZP_03062129.1| hypothetical protein EcB171_3170 [Escherichia coli B171] # 1 57 1 57 57 79 77.0 7e-14 MKRLVTRGSYAVAAVFPTPHCVNGGADIWLRASLVWKAIAVALNIHHQRKPALAKSL >gi|299856446|gb|ADWV01000005.1| GENE 94 90515 - 90724 109 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAQESPLLAPSIGTSPMIAFIQAILGAYRFCEKLLIAGGYNSIDEKNHSNRFIDFVNVIC FQSNNHEYS >gi|299856446|gb|ADWV01000005.1| GENE 95 91309 - 92007 220 232 aa, chain + ## HITS:1 COG:no KEGG:Nwat_3173 NR:ns ## KEGG: Nwat_3173 # Name: not_defined # Def: hypothetical protein # Organism: N.watsoni # Pathway: not_defined # 1 218 195 412 432 352 75.0 8e-96 MDAYVLGALPPYNALLGGKLIACLLRSRDLYDDFAKVYGDTVGVISQKKKQARLLAITTT SSMGRSSVYNRLKLDGIQYLKSIGYTGGWGHFHIPDSLFIELRDYLRDMDHAYADHYMFG NGPNWRLRTTKAALNVLGFRDNLMKHGIQREVFISQLAENATSILQTGKGEPDLTSLLSA KEIAECAMARWMVPRSIRNPEYRLWKARDLFDFISNDSLKFPPSDEIAKTVV >gi|299856446|gb|ADWV01000005.1| GENE 96 93442 - 93675 139 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|92110293|emb|CAJ87562.1| ## NR: gi|92110293|emb|CAJ87562.1| putative competence protein [Escherichia coli] # 1 77 472 548 548 165 100.0 8e-40 MLSLDDGEFIELSPNLRSRILSFILQMGHTLHGFSLNNDFLLVEKLVDLQPEPHLLPHYR ALVKEVKTNGFECNRFR >gi|299856446|gb|ADWV01000005.1| GENE 97 93687 - 95570 495 627 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300816573|ref|ZP_07096794.1| ## NR: gi|300816573|ref|ZP_07096794.1| conserved hypothetical protein [Escherichia coli MS 107-1] # 1 627 1 627 627 1211 100.0 0 MSYQYSQEAKERISKLGQSEIVNFINEISPTLRRKAFGCLPKVPGFRAGHPTEIKEKQKR LIGYMFQSHPSSEERKAWKSFSLFWQFWAEEKIDKSFSMINNLGLKENSGSIFIRELAKN FPKVARENIERLFIFSGFANDPDVINAFNLFPPAVVLARDIVVDTLPIRLDELEARISLI ADNVEKKNNHIKELELKIDAFSERFDNYFNNEKSNLKIINELQSLINSETKQSDIANKSI DELYHFNEKNKQLILSLQEKLDFNALAMNDISEHEKLIKSMANEISELKNALTILCDNKR KNNELDYINELKKLTERIDTLEINTSQASKVSVTNRFTKFHEIAHYENYEYLSSSEDISN RISLNLQAVGLTKNSAETLARLTLATFVSGQIIQFSGSLADIIADAIAIAIGAPRYHIWR VPVGIISDMDSFDFIETIAESSRCLLLKGANLSAFEIYGAAIRDIVVQRQIHPTNYDHLA LIATWKQGPATFPDGGMLAELGPVIDTDTLKMRGLSAILPQLKPGCLAKDKWTNIDGLQL DSVDDYVDELRALLDEAGFDGGTLWKRMVHIFYTSLIRVPNGNYIYDLYSVLSFYTLTWA KIKGGPVQKIEDIANRELKNYSAKISS >gi|299856446|gb|ADWV01000005.1| GENE 98 95707 - 96165 -336 152 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLGASIKPEIVPDSSLDDHSSLPSAGAPIHSFASQISTLPVHTFSSTKRTLPADLATTPV ENVQEGSPPKKTAILLSIRTACGGAVSQLPPSNLIMSPNSAKLFNIDIMPGCIALSISAM SGHKGTNFRLTALVSRSEVTVCLASSVSDIEY >gi|299856446|gb|ADWV01000005.1| GENE 99 96622 - 102132 616 1836 aa, chain + ## HITS:1 COG:SMc03761 KEGG:ns NR:ns ## COG: SMc03761 COG1205 # Protein_GI_number: 15966899 # Func_class: R General function prediction only # Function: Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster # Organism: Sinorhizobium meliloti # 26 622 23 603 1832 219 30.0 4e-56 MINKNKVTERSGIHDTVKSLSENLRKYIEAQYHIRDEGLIAERRALLQQNETIAQAPYIE ATPIYEPGAPYSELPIPEAASNVLTQLSELGIGLYQRPYKHQSQALESFLGEDASDLVIA TGTGSGKTESFLMPIIGKLAIESSERPKSASLPGCRAILLYPMNALVNDQLARIRRLFGD SEASKILRSGRCAPVRFGAYTGRTPYPGRRSSRRDELFIKPLFDEFYNKLANNAPVRAEL NRIGRWPSKDLDAFYGQSASQAKTYVSGKKTGKQFVLNNWGERLITQPEDRELMTRHEMQ NRCPELLITNYSMLEYMLMRPIERNIFEQTKEWLKADEMNELILVLDEAHMYRGAGGAEV ALLIRRLCARLDIPRERMRCILTSASLGSIEDGERFAQDLTGLSPTSSRKFRIIEGTRES RPESQIVTSKEANALAEFDLNSFQCVAEDLESAYAAIESLAERMGWQKPMIKDHSTLRNW LFDNLTGFGPIETLIEIVSGKAVKLNILSENLFPDSPQQIAERATDALLALGCYAQRASD GRVLIPTRMHLFYRGLPGLYACIDPDCNQRLGNHSGPTILGRLYTKPLDQCKCASKGRVY ELFTHRDCGAAFIRGYVSSEMDFVWHQPNGPLSEDEDIDLVPIDILVEETPHVHSDYQDR WLHIATGRLSKQCQDEDSGYRKVFIPDRVKSGSEITFDECPVCMRKTRSAQNEPSKIMDH VTKGEAPFTTLVRTQISHQPASRPIDGKHPNGGKKVLIFSDGRQKAARLARDIPRDIELD LFRQSIALACSKLKDINREPKPTSVLYLAFLSVLSEHDLLIFDGEDSRKVVMARDEFYRD YNSDLAQAFDDNFSPQESPSRYKIALLKLLCSNYYSLSGTTVGFVEPSQLKSKKMWEDVQ SKKLNIESKDVHALAVAWIDTLLTEFAFDESIDSPLRIKAAGFYKPTWGSQGRFGKALRK TLIQHPAMGELYVEVLEEIFRTHLTLGKDGVYFLAPNALRLKIDLLHVWKQCNDCTALMP FALEHSTCLACGSNSVKTVEPSESSYINARKGFWRSPVEEVLVSNSRLLNLSVEEHTAQL SHRDRASVHATTELYELRFQDVLINDNDKPIDVLSCTTTMEVGVDIGSLVAVALRNVPPQ RENYQQRAGRAGRRGASVSTVVTYSQNGPHDSYYFLNPERIVAGSPRTPEVKVNNPKIAR RHVHSFLVQTFFHELMEQGIYNPTEKTAILEKALGTTRDFFHGAKDTGLNLDSFNNWVKN RILSTNGDLRTSVAAWLPPVLETGGLSASDWFAKVAEEFLNTLHGLAEIVPQIAVLVDEE NEDDEQTSGGMKFAQEELLEFLFYHGLLPSYAFPTSLCSFLVEKIVKNIRGSFEVRTVQQ PQQSISQALSEYAPGRLIVIDRKTYRSGGVFSNALKGELNRARKLFNNPKKFIHCDKCSF VRDPHNNQNSENTCPICGGILKVEIMIQPEVFGPENAKELNEDDREQEITYVTAAQYPQP VDPEDFKFNNGGAHIVFTHAIDQKLVTVNRGKNEGGSSGFSVCCECGAASVYDSYSPAKG AHERPYKYIATKETPRLCSGEYKRVFLGHDFRTDLLLLRITVGSPLVTDTSNAIVLRMYE DALYTIAEALRLAASRHKQLDLDPAEFGSGFRILPTIEEDTQALDLFLYDTLSGGAGYAE VAAANLDDILTATLALLEGCECDTSCTDCLNHFHNQHIQSRLDRKLGASLLRYALYGMVP RCASPDIQVEKLSQLRASLELDGFQCLIKGTQEAPMIVSLNDRSVAVGSYPGLIDRPDFQ HDVYKSKNTNAHIAFNEYLLRSNLPQAHQNIRKLLR >gi|299856446|gb|ADWV01000005.1| GENE 100 102382 - 102660 337 92 aa, chain + ## HITS:1 COG:STM2765 KEGG:ns NR:ns ## COG: STM2765 COG2801 # Protein_GI_number: 16766077 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 1 88 1 88 88 145 94.0 1e-35 MRKARFTEHQIIAVIKSVEAGRTVKDVCREAGISEATYYNWKSRYGGMEASDIKKIKDLE DENPRLKQMFADLSLENRALKDVIEKSFKTSL >gi|299856446|gb|ADWV01000005.1| GENE 101 102650 - 102892 138 80 aa, chain - ## HITS:1 COG:no KEGG:SeAg_B4809 NR:ns ## KEGG: SeAg_B4809 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Agona # Pathway: not_defined # 5 80 1 76 78 105 73.0 5e-22 MDPFVIPRVSLPPQNLEKFRKTVSWVSLCHCLQSDNNGFVRRGIRAVMVNRSAQVQTPAG LTDTESERRYQMSNQLTLKG >gi|299856446|gb|ADWV01000005.1| GENE 102 102944 - 103492 345 182 aa, chain + ## HITS:1 COG:STM2764 KEGG:ns NR:ns ## COG: STM2764 COG2801 # Protein_GI_number: 16766076 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 3 105 53 155 155 202 97.0 3e-52 MLVRNPSPLATPEALNQSWSVDFMHDALVCGRRFRTFNVVDDFNREALSIEIDLNLPALR VVRVLNRIASNRGYPVMLRMDNGPEFISLALAEWAEKHAVKLEFIQPGKPTQNAFIERFN RTYRTEILDFYLFRTLNEVREITERWVSEYNCERPYESLNNMMPEEYRQHHYLAGISKNA WN >gi|299856446|gb|ADWV01000005.1| GENE 103 103557 - 103781 216 74 aa, chain - ## HITS:1 COG:no KEGG:ECP_2965 NR:ns ## KEGG: ECP_2965 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 74 187 260 260 131 89.0 9e-30 MFTQDLEGCKQSRYIIEAILELSRKLNIKTIVEGVETMELVNKLMLLGVDYFQGYYFGQA IELCSFIREYRKTV >gi|299856446|gb|ADWV01000005.1| GENE 104 104392 - 105384 207 330 aa, chain - ## HITS:1 COG:no KEGG:ECP_2966 NR:ns ## KEGG: ECP_2966 # Name: not_defined # Def: PixG protein # Organism: E.coli_536 # Pathway: not_defined # 1 330 1 330 330 627 98.0 1e-178 MKYVKKILGISFFSLLPLSAEAESYCNLLWANNTLPSASVNVSFDGNTSGIFPLNLQAGG LSTVIKRAAKNMDTFVTLDGTYRYWIQYPEAWQTTPDGLKYRITSELEVSGTQTAGVKTV VTPVGYHTWVNTYGCRDVGGTYDFGVASVSGVNIEIDRGTAWPGVYSIQLPVKVAYEENK GNYDGKNGGGWQEFPVSMKSFSPVDSKSISITISSKCNVGEQSLSVNMGDNITPDEAKSG VEKKVNFSLTCNAPAKVSLSLKGTDIVDGVNNKTKCGSGSCSLNFDNDSSSKILEVNQGT YQVPITVRFQDANPVAGGFDGSAVLSVDIL >gi|299856446|gb|ADWV01000005.1| GENE 105 105407 - 105670 109 87 aa, chain - ## HITS:1 COG:no KEGG:ECP_2967 NR:ns ## KEGG: ECP_2967 # Name: not_defined # Def: PixF protein # Organism: E.coli_536 # Pathway: not_defined # 1 87 86 172 172 158 98.0 6e-38 MTGKDNVLATNIDGLGIELYQGGEGTGNHLILGSDSSGYGYEVINALSEKNVERTTFTFT AKIYKAEGVTINSGEFSASALINIVYL >gi|299856446|gb|ADWV01000005.1| GENE 106 106009 - 106572 231 187 aa, chain - ## HITS:1 COG:no KEGG:ECP_2968 NR:ns ## KEGG: ECP_2968 # Name: not_defined # Def: PixJ protein # Organism: E.coli_536 # Pathway: not_defined # 1 187 1 187 187 381 100.0 1e-105 MNRATIGFYLAVVLGSCSMNGVSQADELLTRDDFFVADESRHQWVTEHNGRTGALNVKGA LVSSPCILDTPEVNFPLQKDKGRYVLNLKVSRCGDGHSDIPERQSTEHGNIVVKQSAVLK TGKDQILLSAWRNGGLSRKNLQHGDNQITYYINEAQYQKIAKTQMPVTAHKTSDSNRGVM HLNIMYE >gi|299856446|gb|ADWV01000005.1| GENE 107 106609 - 107340 546 243 aa, chain - ## HITS:1 COG:YPO0699 KEGG:ns NR:ns ## COG: YPO0699 COG3121 # Protein_GI_number: 16121020 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Yersinia pestis # 24 242 20 237 239 279 61.0 3e-75 MQKMKPALKKTLMAVACLSAVPAAQAAVSLDRTRAIFNGDEKSMTLNIANDNKQLPYLAQ AWVENEKKEKITTGPIIATPPVQRLEPGSKSMVRLTSTPDISRLPQDRESLFYFSLREIP PKSDKANVLQIALQTKIKLFYRPESIKAKPNAVWQDQLVLNKTSGGYRIDNPTPYYVTVI GIGGSEKQAREGEFDAVMLAPKSTQMVKSGTYNTPYLSYINDYGGRPVLQFSCGGSRCTA VKK >gi|299856446|gb|ADWV01000005.1| GENE 108 107409 - 109868 1769 819 aa, chain - ## HITS:1 COG:YPO0698 KEGG:ns NR:ns ## COG: YPO0698 COG3188 # Protein_GI_number: 16121019 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Yersinia pestis # 1 818 15 825 826 819 50.0 0 MLSLAGVPVYAVDFNTDVLDAADRQNIDFSRFSRAGYIMPGQYQMEIRVNGQDISPSAFQ IAFLEPPFSDSDNEKPLPEPCLTPEIVSRMGLTEASQEKVTYWNNGQCADFRQLSGVEIR PNPAEGMLYINMPQAWLEYSDASWLPPSRWDNGIPGLLFDYNINGTVNKPHQGKQSQSLN YNGTAGANFGAWRLRADYQGNLNHTTGSAQGTDSQFTWSRFYMYRAIPRWRANLTLGENY INSEIFSSWRYTGASLESDDRMLPPKLRGYAPQVSGIADTNARVVISQQGRILYDSTVPA GPFTIQDLDSSVRGRLDVEVIEQDGRKKTFQVDTAYVPYLTRPGQVRYKLVSGRSRTYEH TMEGPVFAAGEASWGISNTWSLYGGSIVAGDYNALAVGLGRDLSKFGTVSADVTQSVARI PGYDTKQGKSWRLSYSKRFDEVNTDITFAGYRFSERNYMTMDQYLNARYRNDFTGREKEL YTVTLNKNFEDWKASVNLQYSHQTYWDRRTSDYYTLSVNRYFDAFSFKNIALGISASRSK YLNRDNDSAFVRLSVPWGTGTASYSGSMSNDRYTNTVGYSDTLNNGLSSYSLNAGVNSGG GQPSQRQMSAYYNHNGSLTNLSASFSAVENGYSSFGMSASGGATVTMKGAALHAGGMNGG TRLLVDTDGVGGVPVDGGRVYTNRWGIGVVTDVSSYYRNTTSVDLNKLPEDMEATRSVVE SVLTEGAIGYREFEVLKGSRLFAVLRMSDNSYPPFGASVTNAKGRELGMVADSGLAWLSG VNPGETLNVGWDGRTQCVVDIPAHPDPAQQLLLPCRQVK >gi|299856446|gb|ADWV01000005.1| GENE 109 110040 - 110627 318 195 aa, chain - ## HITS:1 COG:no KEGG:ECP_2971 NR:ns ## KEGG: ECP_2971 # Name: not_defined # Def: PixH protein # Organism: E.coli_536 # Pathway: not_defined # 1 195 1 195 195 401 100.0 1e-111 MLRRMILSVLFLWCAVAQALPSASFPPPGMTLPEYWGEEHVWWDGRASFKGQVIAPACTL SMEDAWQEIDMGTTPLRDLQNSPAGPEKKFRLRLRNCELTGAGKQVYTATRVRVTFDGIP GETPDKFSLTGQAEGINLQIMDNYGYPARAGKSMPPLILRGNEDGLDYSLRIVRNGYPLK AGDYYAALRFKLDYE >gi|299856446|gb|ADWV01000005.1| GENE 110 110713 - 111219 444 168 aa, chain - ## HITS:1 COG:ECs0744 KEGG:ns NR:ns ## COG: ECs0744 COG3539 # Protein_GI_number: 15829998 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 3 168 11 193 193 87 33.0 1e-17 MLKSTLGIAIAFSLCAVAHAANQGQGVVNFKGTVIDAPCGIDPDSADQTIDFGQISKSHL DADGISVKKDLNIKLVNCEPNKSVKVTFSGATIASAANELGTAGDTGTAVVISGQDGKLV SFGTEGSAQSLQEGENTLHYSSWVKKATGGTVKEGDFTAVANFNLSYQ >gi|299856446|gb|ADWV01000005.1| GENE 111 112343 - 112837 247 164 aa, chain - ## HITS:1 COG:no KEGG:ECP_2974 NR:ns ## KEGG: ECP_2974 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 164 1 164 164 307 99.0 9e-83 MTLNTSQVSYYITQRKKGITQHISAMKAGISVRSGRRIEKGQRAKNSVRHWSTRKDPLEA VWDSMLVPLLKERPVLTPTTLLEMLQDKYPGQYPNSFRRTMQRRGREWKLQSGAEQEVMF RQWHQPGLRGLLDFTKLKGVVVTIAGKLLVHMLYNFRLEWSHWS >gi|299856446|gb|ADWV01000005.1| GENE 112 113196 - 114443 929 415 aa, chain - ## HITS:1 COG:STM2396 KEGG:ns NR:ns ## COG: STM2396 COG2204 # Protein_GI_number: 16765722 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Salmonella typhimurium LT2 # 1 414 1 414 415 662 80.0 0 MLSSEYSILLIDDDADVLDAYTQLLEQSGYRVFACNNPFEAQAWIQPDWPGIVLSDVCMP GCSGIDLMMLFHQDDQQLPILLITGHGDVPMAVDAVKKGAWDFLQKPVDPGKLLSLVEEA LRQRQSIIARRQYCQQTLQVELIGRSEWINQYRRRLQQLSETDIAVWLYGAPGTGRMTGA RYLHQFGRNAQGEFVYRELTPDNAPQLNDFIALAQGGTLVLSHPEHLTREQQYHLVQLQS QEHRPFRLIGIGDTSLVELAASNHIIAELYYCFAMTQIACLPLTQRPDDIEPLFRHYLYK ACQRLNHPVPEVGKEMLKEMMRRMWPNNVRELANAAELFTVGILPLAETANPLMHVGTPA PLDRRVEDAERQIITEALNIHQGRINEVAEYLQIPRKKLYLRMKKYGLSKEHYKN >gi|299856446|gb|ADWV01000005.1| GENE 113 114433 - 116442 1354 669 aa, chain - ## HITS:1 COG:STM2397 KEGG:ns NR:ns ## COG: STM2397 COG4192 # Protein_GI_number: 16765723 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating phosphoglycerate transport system # Organism: Salmonella typhimurium LT2 # 6 669 5 668 668 973 83.0 0 MKNITLWQRLRQVSISTSLRCAFLMGALLTLIVSSVSLYSWHEQSSQIRYSLDEYFPRIH SAFLIEGNLNLVVDQLNEFLQAPNTTVRLQLRTQIIQHLDTIERLSRGLSSRERQQLTVI LRDSRSLLSELDRALYNMFLLREKVSELSARIDWLHDDFTTELNSLVQDFTWQQGTLLDQ IASRQGDTAQYLKRSREVQNEQQQVYTLARIENQIVDDLRDRLNELKSGRDDDTQVETHL RYFENLKKTADENIRMLDDWPGTITLRQTIDELLDMGIVKNKMPDTMREYVAAQKALEDA SRTREATLGRFRTLLEAQLGSTHQQMQMFNQRMEQIVRVSGGLILVATALALLLAWVFNH YFIRSRLVKRFTLLNQAVVQIGLGGTETTIPVYGNDELGRIAGLLRHTLGQLNVQKQQLE QEITDRKVIEADLRATQDELIQTAKLAVVGQTMTTLAHEINQPLNALSMYLFTARRAIEQ TQKEQASMMLGKAEGVISRIDAIIRSLRQFTRRAELETSLHAVDLAQMFSAAWELLAMRH RSLQATLVLPQGTATVSGDEVRTQQVLVNVLANALDVCGQGAVITVNWQMQGKTLNVFIG DNGPGWPEALLPSLLKPFTTSKEVGLGIGLSICVSLMEQMKGELRLASTMTRNACVVLQF RLTDVEDAK >gi|299856446|gb|ADWV01000005.1| GENE 114 116439 - 117710 815 423 aa, chain - ## HITS:1 COG:STM2398 KEGG:ns NR:ns ## COG: STM2398 COG1840 # Protein_GI_number: 16765724 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 29 423 3 397 397 634 84.0 0 MTWITNRFFSWCEIGIKTMILLLLLMDTGAVRAQRNELVMATTFSPGATAWIIQRWQTEP ESVMIRTLNRTSASLEQLLDTANVENVDLILTSSPMLLQHLQEHQKLAPFDDAPAESQNL VPESIRATSVAVAISGFGLLINRPALSVKHLPAPADWDDLALPIYQDALLMSSPSRSDTN HLMVESLLQQKGWVKGWETLLTSAGNLVTISSRSFGVADKIKSGLGVAGPVIDNYANLLL NDPHLSFTYFPRSAVSPTYVAILKKSPHADAARRFIHYLLSPKGQRILADANTGKYPVTP LAADNPRATQQQLLMNQPPLNYHLILKRQRLVQRLFDTAISFRLAQLKDAWRALHSTEAR LKKPLPEIRALLTQVPVAAASSEDPVWLAQFDNKSFTEQQMMKWQLWFLNNQRLAIKKLE ELK >gi|299856446|gb|ADWV01000005.1| GENE 115 118055 - 119419 1143 454 aa, chain + ## HITS:1 COG:STM2399 KEGG:ns NR:ns ## COG: STM2399 COG2271 # Protein_GI_number: 16765725 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Salmonella typhimurium LT2 # 1 447 1 447 463 803 90.0 0 MLSIFKTGQAADSVPAEKIQVTYRRYRMQALLSVFLGYLAYYIVRNNFTLSTPYLKEQLD LSATQIGVLSSCMLIAYGISKGVMSSLADKASPKVFMACGLVLCAIVNVGLGFSTAFWIF AVLVILNGLFQGMGVGPSFITIANWFPRRERGRVGAFWNISHNVGGGIVAPIVGAAFALL GSEHWQSASYIVPACVAIVFAVIVLILGKGSPRQEGLPSLEEMMPEEKVVLNTRQTVKAP ENMSAFQIFCTYVLRNKNAWYVSLVDVFVYMVRFGMISWLPIYLLTVKHFSKEQMSVAFL FFEWAAIPSTLLAGWLSDKLFKGRRMPLAMICMALIFICLIGYWKSESLFMVTIFAAIVG CLIYVPQFLASVQTMEIVPSFAVGSAVGLRGFMSYIFGASLGTSLFGIMVDHIGWHGGFY LLGCGIICCIIFCWLSHRGAIELERHRAAYIKEH >gi|299856446|gb|ADWV01000005.1| GENE 116 119888 - 120061 79 57 aa, chain + ## HITS:1 COG:no KEGG:ECP_2980 NR:ns ## KEGG: ECP_2980 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 57 12 68 68 119 100.0 5e-26 MSNTSSNFDITGTLLGQELRKRKTPQKKNCHYSADNGAWHDGVPCGAFAWYSAQSVV >gi|299856446|gb|ADWV01000005.1| GENE 117 120006 - 120182 96 58 aa, chain + ## HITS:1 COG:yi21_g3 KEGG:ns NR:ns ## COG: yi21_g3 COG2963 # Protein_GI_number: 16129938 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 49 45 93 136 68 75.0 2e-12 MTVSHVVHLHGIQPSLLFKWKKQYQEGSLTAVAAGEDVVPASELAAAIKNKRVTALAG >gi|299856446|gb|ADWV01000005.1| GENE 118 120267 - 120422 57 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIVYKGNAIIVLFWRVKKRAYLNDKRAAVQALSGYSIPVVTVKVRVCCGAT >gi|299856446|gb|ADWV01000005.1| GENE 119 120368 - 121381 650 337 aa, chain - ## HITS:1 COG:no KEGG:ECP_2981 NR:ns ## KEGG: ECP_2981 # Name: not_defined # Def: putative cytoplasmic protein # Organism: E.coli_536 # Pathway: not_defined # 1 337 1 337 337 696 97.0 0 MSTRINLWRALFGEKPRILLENSDFTVTSFRYDSGVEGLKIANSRGHLIILPWMGQMIWD AQFDGHSLTMCNMFHQPKPATEVIETYGCFAFHSGLLANGCPSAEDTHLLHGEIACAAMD EAWLELEGGMLRLTGRYEYVMGFGHHYLAQPTVVLHKSSTLFDIKMAVTNLASVDMPLQY MCHMNYAYIPNATFSQNIPDEILRLRESVPSHVNPTAQWLAFNQRIMQGEASLSTLNQPE FYDPEIVFFADKLDAYTDQPEFRMIAPDGTTFVTRFSSAELNYVTRWILYNGEQQVAAFA LPATCRPEGYLAAQRNGTLIQVAPQQTRTFTVTTGIE >gi|299856446|gb|ADWV01000005.1| GENE 120 121393 - 122454 912 353 aa, chain - ## HITS:1 COG:STM3792 KEGG:ns NR:ns ## COG: STM3792 COG0738 # Protein_GI_number: 16767076 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Salmonella typhimurium LT2 # 1 353 86 438 438 593 95.0 1e-169 MAILIGLTLYIGGCTLFFPASHMATYTMFLAAIFAIAIGLSFLETAANTYSSMIGPKAYA TLRLNISQTFYPIGAASGILLGKYLVFSEGESLEKQMSGMNAEQIHNFKVLMLENTLEPY KYMIMILVVVMVLFLLTRFPTCKVAQTSHHKRPSAMDTLRYLARNPRFRRGIVAQFLYVG MQVAVWSFTIRLALELGDINERDASNFMVYSFACFFIGKFIANILMTRFNPEKVLILYSV IGALFLAYVALAPSFSAVYVAVLVSVLFGPCWATIYAGTLDTVDNEHTEMAGAVIVMAIV GAAVVPAIQGYIADMFHSLQLSFLVSMLCFVYVGVYFWRESKVRTALAEVTAS >gi|299856446|gb|ADWV01000005.1| GENE 121 122737 - 123657 729 306 aa, chain - ## HITS:1 COG:STM3793 KEGG:ns NR:ns ## COG: STM3793 COG0524 # Protein_GI_number: 16767077 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 1 306 1 306 306 599 96.0 1e-171 MDIAVIGSNMVDLITYTNQMPKEGETLEAPAFKIGCGGKGANQAVAAAKLNSKVLMLTKV GDDIFADNTIRNLESWGINTTYVEKVPCTSSGVAPIFVNANSSNSILIIKGANKFLSPED IDRAAEDLKKCKLIVLQLEVQLETVYHAIEFGKKNGIEVLLNPAPALRELDMSYACKCDF FIPNETELEILTGMSVDTYDHIRLAARSLVDKGLNNIIVTMSEKGALWMTRDQEVHVPAF KVNAVDTSGAGDAFIGCFSHYYVQSGDVEAALKKAALFAAFSVTGKGTQSSYPSIEQFNE FLTLNE >gi|299856446|gb|ADWV01000005.1| GENE 122 123961 - 124743 422 260 aa, chain + ## HITS:1 COG:STM3794 KEGG:ns NR:ns ## COG: STM3794 COG1349 # Protein_GI_number: 16767078 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Salmonella typhimurium LT2 # 1 260 1 261 261 429 82.0 1e-120 METKQKERIRRLIEILKKTDRIHLKDAARMLEVSVMTIRRDLHQEYEPLPLTLLGGYIVM VHKPAPSMPVIQDVPRNHRDDLPIAILAAGMVNENDLIFFDNGQEIPLVISMIPDAITFT GICYSHRVFVALNEKPNVTAILCGGTYRARSDAFYDASNSSPLDSLNPRKIFISASGVHD HFGVSWFNPEDLATKRKAMARGLRKILLARHALFDEVASASLAPLSAFDVLISDRPLPAD YVTHCRNASVKIITPDSEDE >gi|299856446|gb|ADWV01000005.1| GENE 123 125651 - 125788 61 45 aa, chain - ## HITS:1 COG:no KEGG:c1235 NR:ns ## KEGG: c1235 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 43 1 43 170 75 79.0 5e-13 MQITEALLSEPGEIRRFVKQAVDHWPHLLAIHFTLHSTRVNIDDY >gi|299856446|gb|ADWV01000005.1| GENE 124 125891 - 126085 58 64 aa, chain - ## HITS:1 COG:no KEGG:c0314 NR:ns ## KEGG: c0314 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 40 1 40 51 84 100.0 1e-15 MVREAYFDAPNLGRLIQDVWNNPGFVSPGASKQYHPGCGAVPWCWSPRESSCVPSGQPAL CHPD >gi|299856446|gb|ADWV01000005.1| GENE 125 126138 - 126401 197 87 aa, chain - ## HITS:1 COG:no KEGG:ECP_2988 NR:ns ## KEGG: ECP_2988 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 87 91 177 177 182 100.0 3e-45 MVLLLNNDVWCKSREVVVLRNLIEQAWGKVLGEDNSITHLVVYPEVLSLVFDAANTYNAE PGVLEQTARAYIESHGAVERHLGCSDF >gi|299856446|gb|ADWV01000005.1| GENE 126 127357 - 128379 611 340 aa, chain + ## HITS:1 COG:YPO1900 KEGG:ns NR:ns ## COG: YPO1900 COG4584 # Protein_GI_number: 16122147 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 340 1 340 340 685 99.0 0 MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEY RDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEP GRQMQVDWGTMRNGCSPLHVFVAVLGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPR EVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML ALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA >gi|299856446|gb|ADWV01000005.1| GENE 127 128379 - 129158 579 259 aa, chain + ## HITS:1 COG:YPO2025 KEGG:ns NR:ns ## COG: YPO2025 COG1484 # Protein_GI_number: 16122266 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Yersinia pestis # 1 259 2 260 260 470 99.0 1e-132 MMELQHQRLMVLAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQA MYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAI AMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQ EEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGE SYRLRQKRKAGVIAEANPE >gi|299856446|gb|ADWV01000005.1| GENE 128 129168 - 129560 115 130 aa, chain - ## HITS:1 COG:no KEGG:c0311 NR:ns ## KEGG: c0311 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 112 1 112 141 228 98.0 4e-59 MNGIKTGLGITPGEHIISADSALSRNIRQCFCLSCHGRLILQTDAQGAWFEHDLYALSEQ QKAACVVLNPEKSHPYIEDMAMFLSPLPVVLEWHCVMCEQFFHGKKFCEACGCQRRMKSD PLISPPTAQY >gi|299856446|gb|ADWV01000005.1| GENE 129 129557 - 129940 226 127 aa, chain - ## HITS:1 COG:no KEGG:c0310 NR:ns ## KEGG: c0310 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 127 3 129 129 241 100.0 5e-63 MYAKSFIAFDGNGRLTGARTAQTAPYDRYTCHLCGSALRYHPQYDTERPWFEHTDDGLTE HGQQCPYVRPERREIQLIKRLQQFVPDALPVVRKASRHCRQCHHDYYGERYCTHCHTGHF SEEGVAE >gi|299856446|gb|ADWV01000005.1| GENE 130 130312 - 130911 150 199 aa, chain - ## HITS:1 COG:no KEGG:c0309 NR:ns ## KEGG: c0309 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 199 1 199 199 407 100.0 1e-112 MKTYNTNPGYEMDPQLLTHFNQHLDSLFGVYSKLLPFRMDFAYRKNTLSYRCACRYAMCA EILRLINEVGEKLVGYAWVMEYTERKGLHIHFVGYLNGQSHRSSYLVSRLMGDIWRRVTG GDGYYHWCRFNKNYPVNINHVIHYSDHKAVNALRYALSYLAKREQKECGIILKCSGLPEK SNRGRPRLGSTLPETYSLV >gi|299856446|gb|ADWV01000005.1| GENE 131 132360 - 133151 249 263 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_3335 NR:ns ## KEGG: EcE24377A_3335 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 263 1 263 263 540 100.0 1e-152 MTTRITFNMTSDETLRIVDEYCHTHKLSRSKVIDALLSATAPVLNDINCYYQLAGKLQSR LLNGVYQRDLPHKRNVVSAEKYCLEIWENKLFTKRILEFDSSNGVLYALKHKRHYRRDKM IGRVESRRIKDICEYQMQLSGEKAKYACFIYIERTIYNHDNPSGGTPVKAAVGNAVILLA KDVIYDEYFFDLRQSFFVSVKDLMASGAKGIPETQKYPDVYCWIPLFSINSGVVITPVYK IDPRKPVTVKKPDQITVVCNYRE >gi|299856446|gb|ADWV01000005.1| GENE 132 133535 - 133741 372 68 aa, chain + ## HITS:1 COG:Z1188 KEGG:ns NR:ns ## COG: Z1188 COG3311 # Protein_GI_number: 15800709 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 9 58 15 64 65 78 70.0 3e-15 MTTLVSLMDDQMVDMTFITQLTGLTDKWFYKLIKDGAFPAPIKLGRSSRWLKSEVEAWLQ ARIAQSRP >gi|299856446|gb|ADWV01000005.1| GENE 133 133835 - 134437 531 200 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_3337 NR:ns ## KEGG: EcE24377A_3337 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 200 3 202 202 409 100.0 1e-113 MKPQYQTRYELLHESYQKWLTGFTRHAVSWGVCHPNIHYFHNLTPGWVSFNGEKPKIAIV PRSLHRLIYGSDKRATPPLDDDLVVNLCTSEHLLVHHPMLEGILLSECERLRQRSLANKL ISLFRQFGGTELRLKLVWLCWLDLMTGNSLDDWTENLKRKSEKELGEWIIDRQKQNAALT DLMDQYVLLAYRTTVDDNRN >gi|299856446|gb|ADWV01000005.1| GENE 134 134340 - 134537 126 65 aa, chain - ## HITS:1 COG:no KEGG:c0304 NR:ns ## KEGG: c0304 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 65 1 66 66 105 89.0 3e-22 MAQYDDDEHVLQVSMRGREQHFRILSHLPEATGISYGYRQPLCGMPGARTDPSDPSVLRS ASDGR >gi|299856446|gb|ADWV01000005.1| GENE 135 136398 - 137579 404 393 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_1028 NR:ns ## KEGG: ECIAI39_1028 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 3 389 1 386 392 707 92.0 0 MQMWEEQVRCIVGKELDDICTNCQYIDAVKRHKQQLGAIEEYTQWLKKEPRASYFFLFQL YTRIHNTFFSQKQPLLFTPGGTHCPEPDVTLRDLTLSPGYHSDYAPQPIPEMDSSVVVPP TNENTLPPEDTPDNTPAGGNTGQAEKTRNAGLTPIPEKRSGMPPEHLRFATGFPSQPKIA GPREKPMRTVHPDKIYREIIWFCSGYLLKSGPEVTRTIINSVFSEWASINNDYPSPFSWV DSRDSEQCDWLWNAMQVRCVGTPLNPLTPEQKYWFACATFDNWEGWNEQQVQFLLKSNPR RNRAKFTISPFPALRVKQHKAVLLDELKSAREQQKRRDERADGSVPLKLSGKIHKQLESI ARSRGVPPKKMLNEMIEQAHRDFVANEQHKTRS >gi|299856446|gb|ADWV01000005.1| GENE 136 138088 - 141720 1662 1210 aa, chain - ## HITS:1 COG:no KEGG:SMU.1577c NR:ns ## KEGG: SMU.1577c # Name: not_defined # Def: hypothetical protein # Organism: S.mutans # Pathway: not_defined # 8 1199 5 1242 1249 443 31.0 1e-122 MSDDSYKFQKLTPFSDVELGVYKNAIDFVFANNDLKNVAISGQYSAGKSSLIESYKKSHS NIKFVHISLAHFRSIEEAETNEPSKDINETALEGKVLNQLIHQINADDIPQTHFKVKKKI KTNNIVINTIFTVLFIAMILHITLFNKWEKFVSLLSEGNIKTLLTLSTKYDTLLISGFIC TILSCIFIYKLIKTQKNRNVLKKINLQGNEIEIFEESNESYFDRYLNEVLYLFENVDADA IVFEDMDRFNSNNIFERLHEVNRLVNIQRDTAGHKKSTLRFIYLLRDDIFISQDRTKFFD YIIPVIPVVDSSNSYDQFITHFDGGGILKLFNERFLQGMSLYIDDMRILKNIYNEFQIYY NKLNTTELDCNKMLAIIAYKNIFPRDFSELQLNQGMVYTIFSEKDNLIIEEIKKIEKDIR DRKKEIEAINDEILNSSQEVDAIYDKELSRYNNHPHYNQAEKADIAKRRAARKESVENKF NGKIEEINELISRSRESLVDSRNKRLKEVITRENIDEIFKLTYTNEIGEERDFNEIKSSE YFDLLKYLIRDGYIDETYTDYMTYFYENSLSRIDKMFLRSITDQKGKEFTYQLKNPKLVV ARLREVDFEQEEALNFDLLAYLLQTPAQVNLIKRLFKQLRKDRRVEFIRGYFETERAQPV FINRLNTQWPEFFSYALTESEFSADWVKLYSIGTFYYSANDAIEAINIDDCLTDYISDSA GYLAISEPKVDKLISGFKLLNVSFVSIKFENANKVLFDAVYQHSLYDINFSNLTLMLSKV YTLNSEDDIRHKNYTLVMSQPDSPLASYVNNHIRDYLDMVLSSCDGSIVDDESIVLSVLN NEGISDEQKGQYINALQTFVTSLSEVESESLWSSLLDKDRAVCSEENIVSYFEHVDGLDD SLIEFINRTDVDLNFQNINIDNELKGKLFKSIVICNDLSNDKYEKLICSLNIICKTSFSA SNIASDKFKILVDKNIIRMDVAPLNFIRDNYSEQLSYYIHKNIRAYVELMTIDNFILDEA ISILSWKVDDDLKVKLLEFVKTPLAIYSKNYSQVVNDYILENNFKPDELLILTSSYKTWG TSTQSLILSRAIQDISALIASPNDVSEPLLKNLFVAEGLNMQNKIALLIALLPGKDLSKT TCKEYLDLLGLSEFSKILGRGKPKIEVDSTNQSLLTALRDNHFFSDFEVDNENPTYYKIT RRRSMFGSDT >gi|299856446|gb|ADWV01000005.1| GENE 137 142206 - 143078 830 290 aa, chain + ## HITS:1 COG:ECs1395 KEGG:ns NR:ns ## COG: ECs1395 COG3596 # Protein_GI_number: 15830649 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 559 97.0 1e-159 MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGE VTPVSDVHAGTREVRRFRLSGHGHSMVITDLPGVGESRDRDAEYEALYRDILSELDLVLW LIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIRE KTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRA QAREQFTGAVDRIFDTAESVCVASVARTVLRAVRDTVVSVARAVWNWIFF >gi|299856446|gb|ADWV01000005.1| GENE 138 143450 - 146296 2247 948 aa, chain + ## HITS:1 COG:Z1211 KEGG:ns NR:ns ## COG: Z1211 COG3468 # Protein_GI_number: 15800732 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 EDL933 # 1 948 57 1005 1005 1395 89.0 0 MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAIALSLAAVTSVPALAADTVVQAG ETVSGGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL QRVNAGGSVSNTVISAGGGQSLQGQAVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG AMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINKNGRQIVAVEGTANTTVVYAGGD QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAG GTATNVTLKQGGALVTSTAATVTGSNRLGNFTVENGKADGVVLESGGRLDVLESHSAQNT LVDDGGILVVSAGGKATDVTMTSGGALIADSGATVEGTNASGKFSIDGISGQASGLLLEN GGSFTVNAGGQAGNTTVGHRGTLTLAAGGNLSGRTQLSKGASMVLNGDVVSTGDIVNAGE IRFDNQTTPDAALSRAVAKGDSPVTFHKLTTSNLTGQGGTINMRVRLDGSNTSDQLVING GQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAFALSRPLQAGAFNYTLN RDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGG HLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDD GSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSL ETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMN FGKGTSSRDTLRDSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSRN GTSLDLQAGLEARVRENITLGVQAGYAHSVSGSSAEGYNGQATLNVTF >gi|299856446|gb|ADWV01000005.1| GENE 139 146624 - 147442 678 272 aa, chain + ## HITS:1 COG:no KEGG:ECO26_3416 NR:ns ## KEGG: ECO26_3416 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 272 1 272 272 538 99.0 1e-152 MRLASRFGHVNQIRRDRPLTHEELMHYVPSIFGEDRHTSRSERYAYIPTITVLESLQREG FQPFFACQIRVRDPGRRGYTKHMLRLRRDGEINGQHVPEIILLNSHDGTSSYQMLPGYFR FVCQNGCVCGQSLGEVRVPHRGNVVEKVIEGAYEVVGVFDRIEEKRDAMQSLVLPPPSRQ ALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK RIHTRTIHSIDTDIKLNRALWVMAETLLENMR >gi|299856446|gb|ADWV01000005.1| GENE 140 147534 - 148019 489 161 aa, chain + ## HITS:1 COG:no KEGG:ECO111_0312 NR:ns ## KEGG: ECO111_0312 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 161 1 161 161 329 96.0 2e-89 MTTVTHNSTTPSVSVTAASGNNPPQLVATLVPDEQRISFWPQHFGLIPQWVTLEPRVFGW MDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAAC LMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID >gi|299856446|gb|ADWV01000005.1| GENE 141 148035 - 148511 486 158 aa, chain + ## HITS:1 COG:ECs1403 KEGG:ns NR:ns ## COG: ECs1403 COG2003 # Protein_GI_number: 15830657 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 298 98.0 2e-81 MQQLSFLPGAMTPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFR VLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKAD RLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL >gi|299856446|gb|ADWV01000005.1| GENE 142 148574 - 148795 337 73 aa, chain + ## HITS:1 COG:no KEGG:c3673 NR:ns ## KEGG: c3673 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 73 1 73 73 149 100.0 2e-35 MKIITRGEAMRIHQQHPTSRLFPFCTGKYRWHGSTEAYTGREVQDIPGVLAVFAERRKDS FGPYVRLMSVTLN >gi|299856446|gb|ADWV01000005.1| GENE 143 148958 - 149326 211 122 aa, chain + ## HITS:1 COG:no KEGG:ECP_0337 NR:ns ## KEGG: ECP_0337 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 122 1 122 122 252 100.0 3e-66 MSDALSGTMLPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGLFSDADAY HLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCKADTLGSGGYVYLAVYPTPET KK >gi|299856446|gb|ADWV01000005.1| GENE 144 149416 - 149793 203 125 aa, chain + ## HITS:1 COG:no KEGG:ECED1_3493 NR:ns ## KEGG: ECED1_3493 # Name: yeeV # Def: toxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage # Organism: E.coli_ED1a # Pathway: not_defined # 1 124 1 124 124 248 98.0 5e-65 MKTLPDTHVREASSCPSPVTIWQTLLSRLLGQHYGLTLNDTPFADERVIEQHIEAGISLC DAVNFLVEKYALVRTDQPGFSTCPRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKH PEAKR >gi|299856446|gb|ADWV01000005.1| GENE 145 149790 - 149993 269 67 aa, chain + ## HITS:1 COG:no KEGG:EcHS_A2141 NR:ns ## KEGG: EcHS_A2141 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 67 1 67 67 110 100.0 2e-23 MKLALTLEADSVNVQALNMGRIVVDVDGVNLAELINKVAENGDSLRVVDERDSTETPATY ASPHQLL >gi|299856446|gb|ADWV01000005.1| GENE 146 150835 - 150975 63 46 aa, chain + ## HITS:1 COG:no KEGG:EcHS_A2143 NR:ns ## KEGG: EcHS_A2143 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 46 1 46 46 64 100.0 1e-09 MKQLSVHIETIEAVSNEHVGNDELCRKIATISGIAILTTTAIVSTG >gi|299856446|gb|ADWV01000005.1| GENE 147 151573 - 151884 83 103 aa, chain + ## HITS:1 COG:no KEGG:ECO26_2916 NR:ns ## KEGG: ECO26_2916 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 103 1 103 103 180 100.0 1e-44 MYVRYDNLTSERSQRARYLFNQNPTHSGYTKEHTYANLYAFPATSRNLSAEAGIRGKNAL PGHESPGHWSSNQSRFSQHGTHIFGEMLVTGSWSAQRVSNQCG >gi|299856446|gb|ADWV01000005.1| GENE 148 152043 - 152372 529 109 aa, chain - ## HITS:1 COG:ECs2809 KEGG:ns NR:ns ## COG: ECs2809 COG2926 # Protein_GI_number: 15832063 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 109 23 131 131 177 100.0 4e-45 METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLLLDNLSDYIKPGMSVEA IQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGEMKNGEAK >gi|299856446|gb|ADWV01000005.1| GENE 149 152544 - 153602 915 352 aa, chain - ## HITS:1 COG:yeeA KEGG:ns NR:ns ## COG: yeeA COG1289 # Protein_GI_number: 16129949 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 352 1 352 352 687 99.0 0 MRADKSLSPFEIRVYRHYRIVHGTRVALAFLLTFLIIRLFTIPESTWPLVTMVVIMGPIS FWGNVVPRAFERIGGTVLGSILGLIALQLELISLPLMLVWCAAAMFLCGWLALGKKPYQG LLIGVTLAIVVGSPTGEIDTALWRSGDVILGSLLAMLFTGIWPQRAFIHWRIQLAKSLTE YNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQTINRN LVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPVFANTEK LNDAVEELRQLLNNHHDLKVVETPIYGYVWLNMETAHQLELLSSLICRALRK >gi|299856446|gb|ADWV01000005.1| GENE 150 153800 - 154273 442 157 aa, chain - ## HITS:1 COG:ECs2811 KEGG:ns NR:ns ## COG: ECs2811 COG3449 # Protein_GI_number: 15832065 # Func_class: L Replication, recombination and repair # Function: DNA gyrase inhibitor # Organism: Escherichia coli O157:H7 # 1 157 1 157 157 317 98.0 8e-87 MNYEIKQEDKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVPKEWVAVFYDNPDETPA EKLRCDIVVTVPNNFTLPENSEGVILTEISGGQYAVAVARVVGDDFAKPWYQFFNSLLQD SAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPKHH >gi|299856446|gb|ADWV01000005.1| GENE 151 154391 - 155557 964 388 aa, chain - ## HITS:1 COG:dacD KEGG:ns NR:ns ## COG: dacD COG1686 # Protein_GI_number: 16129951 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli K12 # 1 388 3 390 390 795 98.0 0 MKRRLIIAASLFIFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN PASLTKLMTGYVVDRTIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKGTHFETVHGLDAPGQHSS AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEIELYDRDKQV AHWPLVTLESVGEGSMFSRLSDYFHHKA >gi|299856446|gb|ADWV01000005.1| GENE 152 155766 - 157193 1225 475 aa, chain + ## HITS:1 COG:ECs2813 KEGG:ns NR:ns ## COG: ECs2813 COG2925 # Protein_GI_number: 15832067 # Func_class: L Replication, recombination and repair # Function: Exonuclease I # Organism: Escherichia coli O157:H7 # 1 475 1 475 475 975 99.0 0 MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDDEFNVIGEPEVFYCKPADDYLPQ PGAVLITGITPQETRAKGENEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNVFYRNF YDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHSNA HDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSGMFGAWR GNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNAAVPVKL VHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVREKVVAIFVEAEPFTPS DNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLD YAEQQRWLEHRRQVFTPEFLQGYAEEIQMLAQQYADDKEKVALLKALWQYAEEIV >gi|299856446|gb|ADWV01000005.1| GENE 153 157236 - 157463 307 75 aa, chain - ## HITS:1 COG:ECs2814 KEGG:ns NR:ns ## COG: ECs2814 COG0425 # Protein_GI_number: 15832068 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 124 100.0 6e-29 MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATEAIPQWAAEEGHAITDY QQIGDAAWSITVQKA >gi|299856446|gb|ADWV01000005.1| GENE 154 157477 - 158535 730 352 aa, chain - ## HITS:1 COG:ECs2815 KEGG:ns NR:ns ## COG: ECs2815 COG2391 # Protein_GI_number: 15832069 # Func_class: R General function prediction only # Function: Predicted transporter component # Organism: Escherichia coli O157:H7 # 1 352 1 352 352 622 98.0 1e-178 MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYIAKNNRMFYALLIAISVQSVGVFALI QAGLLTYEAGAFPWLGTVIGGYLFGLGIVLAGGCATGTWYRAGEGLIGSWIALFTYMVMS AVMRSPHASGLNQTLQHYTTEHNSIADTFNLSVWPLVAVLLVITLWVVMKELKKPKLKVA TLPPRRTGIAHILFEKRWHPFVTAVLIGLIALLAWPLSEATGRMFGLGITSPTANILQFL VAGDVKYINWGVFLVLGIFVGSFIAAKASREFRVRAADAQTTLRSGLGGVLMGFGASIAG GCSIGNGLVMTAMMTWQGWIGLVFMILGVWTASWLVYVRPQRKARLATAAAN >gi|299856446|gb|ADWV01000005.1| GENE 155 158714 - 160072 1672 452 aa, chain - ## HITS:1 COG:ECs2816 KEGG:ns NR:ns ## COG: ECs2816 COG0531 # Protein_GI_number: 15832070 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 452 3 454 454 816 100.0 0 MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVSGLTDGHVPTAYAFALI AILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSSLLDYLFAPMINILLAKIY FEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANFNTVIVVLQVVLIAVILGMVVYGVFE GEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFDGISNLSEETKDAERVIPRAIFL TALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEIMLYVAGKAFQVGALIFSTITVLAS GMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWRTPAMNIILVGAIALLAINFDLVMATA LINFGALVAFTFVNLSVISQFWIREKRNKTLKDHFQYLFLPMCGALTVGALWVNLEESSM VLGLIWAAIGLIYLACVTKSFRNPVPQYEDVA >gi|299856446|gb|ADWV01000005.1| GENE 156 160339 - 161268 854 309 aa, chain - ## HITS:1 COG:yeeY KEGG:ns NR:ns ## COG: yeeY COG0583 # Protein_GI_number: 16129956 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 309 8 316 316 619 100.0 1e-177 MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFT RTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFSLLAPLIEAFYQHHS VTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLA LEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGY LPRYLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEILANSAIAGVYA KSDDGKSAI >gi|299856446|gb|ADWV01000005.1| GENE 157 161314 - 162138 800 274 aa, chain - ## HITS:1 COG:ECs2818 KEGG:ns NR:ns ## COG: ECs2818 COG0451 # Protein_GI_number: 15832072 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 274 1 274 274 528 100.0 1e-150 MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSGIDSYLLRMEPELVCDS DDLDALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAHRIPRIIFTSSTSVYGDAQ GTVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLAGLVGPGRHPGRFFAGKTAPD GEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHPARNVFYPQMARLLGLEPPQFRN SLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE >gi|299856446|gb|ADWV01000005.1| GENE 158 162221 - 162475 123 84 aa, chain - ## HITS:1 COG:AGc3658 KEGG:ns NR:ns ## COG: AGc3658 COG4115 # Protein_GI_number: 15889305 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 84 1 88 89 107 56.0 5e-24 MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFEGKGKPEPLKHNLSGFWSRRI TEEHRLVYAVTDDSLLIAACRYHY >gi|299856446|gb|ADWV01000005.1| GENE 159 162472 - 162723 304 83 aa, chain - ## HITS:1 COG:yefM KEGG:ns NR:ns ## COG: yefM COG2161 # Protein_GI_number: 16129958 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Antitoxin of toxin-antitoxin stability system # Organism: Escherichia coli K12 # 1 83 10 92 92 140 100.0 8e-34 MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRSPAN ARRLMDSIDSLKSGKGTEKDIIE >gi|299856446|gb|ADWV01000005.1| GENE 160 163202 - 164101 1081 299 aa, chain + ## HITS:1 COG:hisG KEGG:ns NR:ns ## COG: hisG COG0040 # Protein_GI_number: 16129960 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 299 1 299 299 574 100.0 1e-164 MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRVRDDDIPG LVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPL SLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEAN GLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQGVIQARESKYIMMHAPTERLDE VIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME >gi|299856446|gb|ADWV01000005.1| GENE 161 164107 - 165411 1258 434 aa, chain + ## HITS:1 COG:ECs2821 KEGG:ns NR:ns ## COG: ECs2821 COG0141 # Protein_GI_number: 15832075 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Escherichia coli O157:H7 # 1 434 1 434 434 793 99.0 0 MSFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDDALREYSAKFDK TTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQV TRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCKKVVLCSPPPIADEILYAAQLCGVQD VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVL VIADSGATPDFVASDLLSQAEHGPDSQVILLTPDADMAHQVAEAVERQLAELPRAETARQ ALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRNARELVDGITSAGSVFLGDWSPESAGD YASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELSKVGFSALASTIETLAAAERLTAHK NAVTLRVNALKEQA >gi|299856446|gb|ADWV01000005.1| GENE 162 165408 - 166478 1166 356 aa, chain + ## HITS:1 COG:hisC KEGG:ns NR:ns ## COG: hisC COG0079 # Protein_GI_number: 16129962 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Escherichia coli K12 # 1 356 1 356 356 712 100.0 0 MSTVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVEFQLTQQTLNRYPECQP KAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETI GVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAI VVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVI APYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYI LARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRAEQV >gi|299856446|gb|ADWV01000005.1| GENE 163 166478 - 167545 1300 355 aa, chain + ## HITS:1 COG:hisB_2 KEGG:ns NR:ns ## COG: hisB_2 COG0131 # Protein_GI_number: 16129963 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Escherichia coli K12 # 149 355 1 207 207 431 99.0 1e-121 MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLG TQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAM DRSNSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGEQLTKRDRYAHVVRNTKETQI DVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEH FFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL >gi|299856446|gb|ADWV01000005.1| GENE 164 167545 - 168135 728 196 aa, chain + ## HITS:1 COG:hisH KEGG:ns NR:ns ## COG: hisH COG0118 # Protein_GI_number: 16129964 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Escherichia coli K12 # 1 196 1 196 196 417 100.0 1e-117 MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFLPGVGTAQAAMDQVRER ELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNR VYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYGEPFTAAVQKDNFYGVQFHPE RSGAAGAKLLKNFLEM >gi|299856446|gb|ADWV01000005.1| GENE 165 168135 - 168872 889 245 aa, chain + ## HITS:1 COG:ECs2825 KEGG:ns NR:ns ## COG: ECs2825 COG0106 # Protein_GI_number: 15832079 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Escherichia coli O157:H7 # 1 245 2 246 246 464 99.0 1e-131 MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKR QIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFG ADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLA GSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTGVRSVIVGRALLEGKFTVKEAIA CWQNA >gi|299856446|gb|ADWV01000005.1| GENE 166 168854 - 169630 921 258 aa, chain + ## HITS:1 COG:ECs2826 KEGG:ns NR:ns ## COG: ECs2826 COG0107 # Protein_GI_number: 15832080 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 519 100.0 1e-147 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN IGELKAYLATQGVEIRIC >gi|299856446|gb|ADWV01000005.1| GENE 167 169624 - 170235 722 203 aa, chain + ## HITS:1 COG:ZhisI_1 KEGG:ns NR:ns ## COG: ZhisI_1 COG0139 # Protein_GI_number: 15802505 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Escherichia coli O157:H7 EDL933 # 1 112 1 112 112 231 96.0 8e-61 MLTEQQRHELDWEKTDGLMPVIVQHAVSGEVLMLGYMNQEALDKTIESGKVTFFSRTKQR LWTKGETSGNFLNVVNITPDCDNDTLLLLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQ LLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHL LVLLQDQDLDLTTVIENLRKRHQ >gi|299856446|gb|ADWV01000005.1| GENE 168 170332 - 171309 1073 325 aa, chain - ## HITS:1 COG:ECs2828 KEGG:ns NR:ns ## COG: ECs2828 COG3765 # Protein_GI_number: 15832082 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Escherichia coli O157:H7 # 1 325 13 337 337 526 92.0 1e-149 MRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGYLAVAKEKWTSTA IVTQPDVGQIAGYTNAMNVIYGPAVPKVSDIQTSLIGRYSTAFSALAETLDNQEEPEKLT IEPTVKNQSLPLAVSYVGETAEGAQKQLAQYIQQVDDQVNEELEKDLKDNIALRMKNLQD SLKTLEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQQTEDVTQDTLFLLGSEALESMI KHEATRPLVFSSNYYQTRQNLLDIESLKVDDLDIPAYRYVMKPTLPIRRDSPKKAITLIL AVLLGGMVGAGIVLGRNALRNYNAK >gi|299856446|gb|ADWV01000005.1| GENE 169 171456 - 172622 1064 388 aa, chain - ## HITS:1 COG:ugd KEGG:ns NR:ns ## COG: ugd COG1004 # Protein_GI_number: 16129969 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Escherichia coli K12 # 1 388 1 388 388 755 99.0 0 MKITISGTGYVGLSNGLLIAQNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIH FNATLDKNEAYRDADYVIIATPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTVP VGFTAAMHKKYRTENIIFSPEFLREGKALYDNLHPSRIVIGERSERAERFAALLQEGAIK QNIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGN HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADAILSRKPQVVG IYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVIIYEPVMKEDSFFNSRLERDLATFKQQA DVIISNRMAEELKDVADKVYTRDLFGSD >gi|299856446|gb|ADWV01000005.1| GENE 170 172925 - 173170 212 81 aa, chain - ## HITS:1 COG:YPO3195 KEGG:ns NR:ns ## COG: YPO3195 COG1943 # Protein_GI_number: 16123357 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 81 72 152 152 163 96.0 9e-41 MSVSGFMGYLKGKSSLMLYEQFDDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLE EDKMGEQLSIPYPGSPFTGRK >gi|299856446|gb|ADWV01000005.1| GENE 171 173581 - 174987 1929 468 aa, chain - ## HITS:1 COG:gnd KEGG:ns NR:ns ## COG: gnd COG0362 # Protein_GI_number: 16129970 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Escherichia coli K12 # 1 468 1 468 468 922 99.0 0 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEF VESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGF NFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGH YVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQTFTEWNNGELSSYLIDITKDIFT KKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAAS KVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIF RAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPT FAAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEWLD >gi|299856446|gb|ADWV01000005.1| GENE 172 175136 - 175954 145 272 aa, chain - ## HITS:1 COG:PM0512 KEGG:ns NR:ns ## COG: PM0512 COG0463 # Protein_GI_number: 15602377 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Pasteurella multocida # 6 272 2 266 266 226 44.0 3e-59 MNSFDEFNVLLSLYKNESPDNLDACFQSISTQSLKRFKIILVIDGPISSELNEVVGKWKS LLPIKIINLERNVGLGNALNIGLKYCSCDYVFRMDTDDICHPDRFSIQFSYLRKHPDIDL LGGQIVEFHECIEEPNGMRLVPSKYEEILQYCKLKNPFNHMTVVFKRESVLKVGGYKHHL YMEDYNLWLRMISIGCKVENLDDVIVFARTDVNSLMRRRGWQYVKSEWKLALLKIKLRIN NPIVSLSVFILRSIPRLLPIMLIRRIYAHNRK >gi|299856446|gb|ADWV01000005.1| GENE 173 175961 - 176446 25 161 aa, chain - ## HITS:1 COG:no KEGG:ECSE_2307 NR:ns ## KEGG: ECSE_2307 # Name: not_defined # Def: putative glycosyltransferase # Organism: E.coli_SE11 # Pathway: not_defined # 2 160 174 331 332 70 32.0 2e-11 MYHKNKYIQDNRNLYYNMNYGRHVIANVLASPFKQFLAFKHYHHPQAYLKKTLQSVEREF PVEFNLTCKSRFREHDNISQALFRYYQLVTGSFYPCYYNDHACVNVVNKKSASQCIEALH QKRFVCINDEINDDLDDSSILINDIIKELDLILPNKSSFEI >gi|299856446|gb|ADWV01000005.1| GENE 174 176977 - 177366 72 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300816662|ref|ZP_07096883.1| ## NR: gi|300816662|ref|ZP_07096883.1| hypothetical protein HMPREF9345_01715 [Escherichia coli MS 107-1] # 1 129 238 366 366 190 100.0 2e-47 MLLQWLSVKGFENYLIFQDMNAYMSGRVWFSYNLLSQMGEPKFFIGSDISLYQPIDFFFI SLLYNNGILASLILLYCNYIFLKKLDNSTKYESILAFIFITVSFTEAVYNIPLLNFFFLL LYKKELRFS >gi|299856446|gb|ADWV01000005.1| GENE 175 178074 - 179006 297 310 aa, chain - ## HITS:1 COG:alr3073 KEGG:ns NR:ns ## COG: alr3073 COG0463 # Protein_GI_number: 17230565 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Nostoc sp. PCC 7120 # 2 215 3 206 324 89 27.0 1e-17 MEISIVIPLYNKENYIKRTLLSIIDTFGRVYNEKEYEIVIVDDGSKDKSVSVVESINSNV VKLYKQENGGPSKARNNGVNFSDGKYVIFCDADDIILPNYGDYIKYSIDNYPDHDVFVAF SRVLRNSKENYSIPLFDPVDVSIVDDFFYEWDKRKFFSASSICIKKHFFIQNDLYFDETI SSGEDLLMFYKAAIKTKYVAYSQPAVLYDKTVDSQLSSNPDLKIGAHTYFLIKVYKTENL SVKDKTAINRIIDKQICFVAVDNLLRKKYANSLNIVLFRKRMLLQPKLAIKLIIASISYK LFTKISSLLR >gi|299856446|gb|ADWV01000005.1| GENE 176 179006 - 179659 139 217 aa, chain - ## HITS:1 COG:no KEGG:Spro_2886 NR:ns ## KEGG: Spro_2886 # Name: not_defined # Def: glycosyl transferase family protein # Organism: S.proteamaculans # Pathway: not_defined # 6 123 117 237 329 68 34.0 2e-10 MDKYDSEIIEFNAVRFIEENANLKIHNNYTLVDEEYHGPINERILSEVFIKSEWYVWARV YKKKLLEGESFNENITHHEDAEFLPRIYLTAKSISRITSQLIYYRLTQNSITTKPKISSI KDLTLVCELYYENINGPNDKYYKAAMINCLWGLKRLILDKGEFSFIKKSRILYYCHIARN SSQLFNMLSWKKRLFVYLPRTYIFLNSLKYKLSKRGA >gi|299856446|gb|ADWV01000005.1| GENE 177 179997 - 180539 107 180 aa, chain - ## HITS:1 COG:rfbX KEGG:ns NR:ns ## COG: rfbX COG2244 # Protein_GI_number: 16129977 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 7 173 247 413 415 66 28.0 3e-11 MGTTYQVGLYSATDRIRGAAIGIFIVVGYAIFPRVSYLFKKNPLEANVLLKKIIFIFSIL GCLGGVLVYSIADEIVLVAFGNQYLDSAILLKIMAPMFLLIPLSIIMANYLLLPNGFKKE YAKNSVIVCLLHMTYVFPLCKYYGAVGGSYSILISEIISFILLIFWTIKNNLLKKVFYAR >gi|299856446|gb|ADWV01000005.1| GENE 178 181594 - 182487 968 297 aa, chain - ## HITS:1 COG:ECs2846 KEGG:ns NR:ns ## COG: ECs2846 COG1210 # Protein_GI_number: 15832100 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Escherichia coli O157:H7 # 1 295 1 295 297 571 98.0 1e-163 MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEILLVTHASK NAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPA IGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTK EPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTD AIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKYGLRNLKEGDKFRMSVKKLLEI >gi|299856446|gb|ADWV01000005.1| GENE 179 182730 - 183725 692 331 aa, chain - ## HITS:1 COG:ECs2847 KEGG:ns NR:ns ## COG: ECs2847 COG0451 # Protein_GI_number: 15832101 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 673 100.0 0 MNDNVLLIGASGFVGTRLLETAIADFNIKNLDKQQSHFYPEITQIGDVRDQQALDQALAG FDTVVLLAAEHRDDVSPTSLYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKHNP DENHPHDPFNHYGKSKWQAEEVLREWYNKAPTERSLTIIRPTVIFGERNRGNVYNLLKQI AGGKFMMVGAGTNYKSMAYVGNIVEFIKYKLKNVAAGYEVYNYVDKPDLNMNQLVAEVEQ SLNKKIPSMHLPYPLGMLGGYCFDILSKITGKKYAVSSVRVKKFCATTQFDATKVHSSGF VAPYTLSQGLDRTLQYEFVHAKKDDITFVSE >gi|299856446|gb|ADWV01000005.1| GENE 180 183883 - 185277 814 464 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_2118 NR:ns ## KEGG: ECIAI1_2118 # Name: wcaM # Def: putative colanic acid biosynthesis protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 464 1 464 464 917 98.0 0 MPFKKLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHDWIASFKQAFSEGQTVV VPAGFVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGSQVTGEEGGSMHNITLDVL GSDCTINGLAMSGFGPVTQIYIGGKNKRVMRNLTIDNLTVSHANYAILRQGFHNQIIGAN ITNCKFSDLQGDAIEWNVAINDSDILISDHVIERINCTNGKINWGIGIGLAGSTYDNNYP EDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIKARNITPDFSKKAGIDNATVAIYGC DNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNFRVNNIQLDNTHLAYKLRGIQISAGNA VSFVALTNIEMKRASLELHNKPQHLFMRNIRVMQESSVGPALSMNFDMRKDVRGVFMAKK ETLLSLANVHAVNERGQSSVDIDRINHHIVNVEKINFRLPERRE >gi|299856446|gb|ADWV01000005.1| GENE 181 185288 - 186508 974 406 aa, chain - ## HITS:1 COG:wcaL KEGG:ns NR:ns ## COG: wcaL COG0438 # Protein_GI_number: 16129984 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli K12 # 1 406 1 406 406 797 99.0 0 MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEIVALQKGDTENTHAAWTKYNLAARTRW LQDEPTGKVAKLRHRASQTLRGIHRKNTWQALNLKRYGAESRNLILSAICGQVATPFHAD VFIAHFGPAGVTAAKLRELGVIRGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLP ISDLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKAPATPLEIISVARLTEKKGLHVA IEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDAD VFLLPSITGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDARAL AQRLAAFSQLDTDELAPVVKRAREKVEHDFNQQVINRELASLLQAL >gi|299856446|gb|ADWV01000005.1| GENE 182 186505 - 187785 1444 426 aa, chain - ## HITS:1 COG:wcaK KEGG:ns NR:ns ## COG: wcaK COG2327 # Protein_GI_number: 16129985 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 426 1 426 426 858 99.0 0 MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLF LQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDA IIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDAL ILRESVSLDLMKRSNITTAKVEDGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAIT LRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLR QHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAG IMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLNEAVSRERHTGMQMVQSVLE RIGEVK >gi|299856446|gb|ADWV01000005.1| GENE 183 188060 - 189538 1776 492 aa, chain - ## HITS:1 COG:wzxC KEGG:ns NR:ns ## COG: wzxC COG2244 # Protein_GI_number: 16129986 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 1 492 1 492 492 835 98.0 0 MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLLTVSLVIIALADTLSDF GIANSIIQRKEISHLELTTLYWLNVGLGIVVCVAVFLLSDLIGDVLNNPDLAPLIKTLSL AFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTFTVVSAHFWPLAMTAILGYLVNS AVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTADSIINYLNTNLSTLVLARILGA GVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPA LLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCIVGLLRSVGNPIGSLLMAKARVDISFKFN VFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQIINTILSYFVMIKPVLGSSYLQYILSLWL PFYLSLPTLVVSSALGIVLKGQLALGMLLAVQIAAGVLAFVLMIVLSRHSLVVEVKRQFC RSEKMKMLLRAG >gi|299856446|gb|ADWV01000005.1| GENE 184 189540 - 190934 1488 464 aa, chain - ## HITS:1 COG:wcaJ KEGG:ns NR:ns ## COG: wcaJ COG2148 # Protein_GI_number: 16129987 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Escherichia coli K12 # 1 464 1 464 464 959 99.0 0 MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSFLYMHLLVALITLVVFQ MLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFNNDFDTQLKIWLAWYGLTS IGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYHDP KPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLLIPDV FTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRAEDIVLATLILLLISPVLCCIALAV KLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVMENDKVVTQATQNDPRVTKVGNFLRRTS LDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPGITGWAQINGWRGE TDTLEKMEKRVEFDLEYIREWSVWFDIKIVFLTVFKGFVNKAAY >gi|299856446|gb|ADWV01000005.1| GENE 185 191070 - 192440 1692 456 aa, chain - ## HITS:1 COG:ECs2853 KEGG:ns NR:ns ## COG: ECs2853 COG1109 # Protein_GI_number: 15832107 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Escherichia coli O157:H7 # 1 456 1 456 456 913 95.0 0 MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLGGDVRLTSETLKLALAK GLRDAGVDVLDIGLSGTEEIYFATFHLGIDGGIEVTASHNPMDYNGMKLVREGARPISGD TGLRDVQRLAEANDFPPVDESQRGSYQKIDLRDAYIDHLLQYINVKNLTPLKLVVNSGNG AAGPVIDALEARFKALNVPVTLIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIEHGADM GIAFDGDFDRCFLFDETGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVTAA GGTPVMSKTGHAFIKERMRKDDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKGK TLGELVRDRMAAFPASGEINSKLAQPVEAINRVEQHFSREALAVDRTDGISMTFADWRFN LRSSNTEPVVRLNVESRGDVPLMEARTRTLLTLLNE >gi|299856446|gb|ADWV01000005.1| GENE 186 192633 - 194069 1629 478 aa, chain - ## HITS:1 COG:cpsB_1 KEGG:ns NR:ns ## COG: cpsB_1 COG0836 # Protein_GI_number: 16129989 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Mannose-1-phosphate guanylyltransferase # Organism: Escherichia coli K12 # 1 341 1 341 341 676 99.0 0 MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTTICRLNGVECESPVVIC NEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAAKRHSPESDPLMLVLAADH VIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGYIRRGEVSAGEQDMVAFEVAQ FVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLDELKKYRPDILDACEKAMSAVDPDLD FIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAGWSDVGSWSSLWEISAHTAEGNVCH GDVINHKTENSYVYAESGLVTTVGVKDLVVVQTKDAVLIADRNAVQDVKKVVEQIKADGR HEHRVHREVYRPWGKYDSIDAGDRYQVKRITVKPGEGLSVQMHHHRAEHWVVVAGTAKVT IDGDIKLLGENESIYIPLGATHCLENPGKIPLDLIEVRSGSYLEEDDVVRFADRYGRV >gi|299856446|gb|ADWV01000005.1| GENE 187 194072 - 195295 1213 407 aa, chain - ## HITS:1 COG:ECs2855 KEGG:ns NR:ns ## COG: ECs2855 COG0438 # Protein_GI_number: 15832109 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 407 1 407 407 805 99.0 0 MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYYPQWQVGENYSAWRYKR EEGAATVWRCPLYVPKQPSTLKRLLHLGSFAVSSFFPLMAQRRWKPDRIIGVVPTLFCTP GMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGGKVAQLATAFERSGLHNVDNVSTI SRSMMNKAIEKGVAADNIIFFPNWSEIARFQHVADADVDALRNQLGLPDNKKIILYSGNI GEKQGLENVIEAADRLRDEPLIFAIVGQGGGKARLEKMAQQRGLRNMQFFPLQSYDALPA LLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGNAVITAEAHTELGQLCETFPGIAVCVE PESVEALVAGIRQALLLPKYNTVAREYAERTLDKENVLRQFINDIRG >gi|299856446|gb|ADWV01000005.1| GENE 188 195292 - 195771 466 159 aa, chain - ## HITS:1 COG:ECs2856 KEGG:ns NR:ns ## COG: ECs2856 COG0494 # Protein_GI_number: 15832110 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 159 2 160 160 317 98.0 7e-87 MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEA AFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVAEEELLLPD EQHDDYRWLTPDALLASDNVHANSRAYFLAEKRAGVPGL >gi|299856446|gb|ADWV01000005.1| GENE 189 195774 - 196739 1050 321 aa, chain - ## HITS:1 COG:wcaG KEGG:ns NR:ns ## COG: wcaG COG0451 # Protein_GI_number: 16129992 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 321 1 321 321 669 99.0 0 MSKQRIFIAGHRGMVGSAITRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVY LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMA ESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHV IPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPML SHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEIS LEAGLASTYQWFLENQDRFRG >gi|299856446|gb|ADWV01000005.1| GENE 190 196742 - 197863 1464 373 aa, chain - ## HITS:1 COG:ECs2858 KEGG:ns NR:ns ## COG: ECs2858 COG1089 # Protein_GI_number: 15832112 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: GDP-D-mannose dehydratase # Organism: Escherichia coli O157:H7 # 1 373 1 373 373 767 100.0 0 MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHL HYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYAC NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM LQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKP GDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLL KSHGYDVAIALES >gi|299856446|gb|ADWV01000005.1| GENE 191 197889 - 198437 389 182 aa, chain - ## HITS:1 COG:wcaF KEGG:ns NR:ns ## COG: wcaF COG0110 # Protein_GI_number: 16129994 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 1 182 1 182 182 362 98.0 1e-100 MQDLSGFSVPKGFRGGNAIKVQLWWAVQATLFAWSPQVLYRWRAFLLRLFGAKIGKNVVI RPSVKITYPWKLTLGDYAWVGDEVNLYTLGEITIGAHSVISQKSYLCTGSHDHASQHFTI NATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPANVVCRGNPAVVIRERVE TE >gi|299856446|gb|ADWV01000005.1| GENE 192 198453 - 199199 653 248 aa, chain - ## HITS:1 COG:ECs2860 KEGG:ns NR:ns ## COG: ECs2860 COG0463 # Protein_GI_number: 15832114 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 495 98.0 1e-140 MLLSIITVAFRNLEGIVKTHASLAHLAQADDISFEWIVVDGGSNDGTREYLENLNGIYNL RFVSEPDNGIYDAMNKGIAMAQGKFALFLNSGDIFHQDAANFVRKLKMQKENVMITGDAL LDFGDGHKIKRSAKPGWYIYHSLPASHQAIFFPVSGLKKWRYDLEYKVSSDYALAAKMYK AGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQILHVPGFWAELSWHLRQRTTSK TKALYNKS >gi|299856446|gb|ADWV01000005.1| GENE 193 199210 - 200427 964 405 aa, chain - ## HITS:1 COG:no KEGG:B21_01951 NR:ns ## KEGG: B21_01951 # Name: wcaD # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 405 1 405 405 646 100.0 0 MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLFLERISVKKLMIALG IGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIRFKTISPHNHRKILRFFYL VVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSNSYVLNFIKFGGKRTTALYFEPAFF ALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGVMTFILFYLLEWAFQYLNKEAIK KKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGSSSYYRIVGPLVMVGYSLTHIDGVV RFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFSWFAVFLSLWYMGKVIKMMINAFGD NRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIVCPFILRKALNITR >gi|299856446|gb|ADWV01000005.1| GENE 194 200402 - 201619 1284 405 aa, chain - ## HITS:1 COG:ECs2862 KEGG:ns NR:ns ## COG: ECs2862 COG0438 # Protein_GI_number: 15832116 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 405 1 405 405 854 99.0 0 MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTP RMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKV KNHKPDITLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGK RQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQG RPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKL MSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQ LVQLSKPEIAQAIFGTTLAEFIQRSRAAYSGQQMLEEYVNFYQNL >gi|299856446|gb|ADWV01000005.1| GENE 195 201616 - 202104 438 162 aa, chain - ## HITS:1 COG:ECs2863 KEGG:ns NR:ns ## COG: ECs2863 COG1045 # Protein_GI_number: 15832117 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 320 100.0 8e-88 MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNLWAAPLLVLYRIITECFFGYEI QAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRGADNMACPHIGNGVELGAN VIILGDITLGNNVTVGAGSVVLDSVPDNALVVGEKARVKVIK >gi|299856446|gb|ADWV01000005.1| GENE 196 202107 - 202946 741 279 aa, chain - ## HITS:1 COG:ECs2864 KEGG:ns NR:ns ## COG: ECs2864 COG0463 # Protein_GI_number: 15832118 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli O157:H7 # 1 279 1 279 279 570 99.0 1e-163 MKDNPLISIYMPTWNRQQLAIRAIKSVLRQDYNNWEMIIVDDCSTSWEQLQQYVTALNDP RITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLY ANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQVFTWAWRFKECLFDTELKAAQ DYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHKDKFDRASK KYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGIRGR >gi|299856446|gb|ADWV01000005.1| GENE 197 203039 - 205201 2771 720 aa, chain - ## HITS:1 COG:wzc_1 KEGG:ns NR:ns ## COG: wzc_1 COG3206 # Protein_GI_number: 16130000 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in exopolysaccharide biosynthesis # Organism: Escherichia coli K12 # 1 480 13 492 492 913 98.0 0 MTEKVKQHAAPVTGSDEIDIGRLVGTVIEARWWVIGITAVFALCAVVYTFFATPIYSADA LVQIEQSSGNSLVQDIGSALANKPPASDAEIQLIRSRLVLGKTVDDLDLDIAVSKNTFPI FGAGWDRLMGRQNETVKVTTFNRPKEMADQVFTLNVLDDKNYTLSSDGGFSARGQAGQML TKEGVTLMVEAIHASPGSEFTITKYSTLGMINQLQNSLTVTENGKDAGVLSLTYTGEDRE QIRDILNSIARNYQEQNIERKSAEASKSLAFLAQQLPEVRSRLDVAENKLNAFRQDKDSV DLPLEAKAVLDSMVNIDAQLNELTFKEAEISKLYTKVHPAYRTLLEKRQALEDEKAKLNG RVTAMPKTQQEIVRLTRDVESGQQVYMQLLNKEQELKITEASTVGDVRIVDPAITQPGVL KPKKGLIILGAIILGLMLSIVGVLLRSLFNRGIESPQVLEEHGISVYASIPLSEWQKARD SVKTIKGVKRYKQSQLLAVGNPTDLAIEAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGK TFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLGTNNVNGLSEILIGQGDITTAAKPTS IAKFDLIPRGQVPPNPSELLMSERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVG TTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSIFRRASAYQDYGYYEYEYKSDAK >gi|299856446|gb|ADWV01000005.1| GENE 198 205204 - 205647 417 147 aa, chain - ## HITS:1 COG:ECs2866 KEGG:ns NR:ns ## COG: ECs2866 COG0394 # Protein_GI_number: 15832120 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 296 100.0 1e-80 MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAISVAAEHQLSL EGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVMLFGHWDNECEIPDPYRKS RETFAAVYTLLERSARQWAQALNAEQV >gi|299856446|gb|ADWV01000005.1| GENE 199 205653 - 206708 989 351 aa, chain - ## HITS:1 COG:ECs2867 KEGG:ns NR:ns ## COG: ECs2867 COG1596 # Protein_GI_number: 15832121 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Escherichia coli O157:H7 # 1 351 29 379 379 696 100.0 0 MSTMGKDVIKQQDADFDLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVG PGDVLNVTVWDHPELTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDI TGRLATYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTA DWRNVVLTHNGREERISLQALMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQST LKMDFSGMTLTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSL VMATEFRLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW >gi|299856446|gb|ADWV01000005.1| GENE 200 207451 - 209034 1814 527 aa, chain + ## HITS:1 COG:ECs2868_2 KEGG:ns NR:ns ## COG: ECs2868_2 COG1253 # Protein_GI_number: 15832122 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli O157:H7 # 232 527 1 296 296 577 100.0 1e-164 MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRDRARVTGLLLAMLMRLL LLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKATMELNERLEGKDSNNPTQR KGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLIMMAAVVIAISLMLMASKPLTQFVN SHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAIGFSVMIEALNQLAIFNRRRFLS ANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVDHGNQQIFNPQERRMIERVLNLNQR TVSSIMTSRHDIEHIDLNAPEDEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQS LRGEPLNLRVLIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTET IAGNLPNEVEEIDARHDIQKNADGSWTANGHMPLEDLVQYVPLPLDEKREYHTIAGLLME YLQRIPKPGEEVQVGDYLLKTLQVESHRVQKVQIIPLRKDGEMEYEV >gi|299856446|gb|ADWV01000005.1| GENE 201 209308 - 211161 1273 617 aa, chain - ## HITS:1 COG:asmA KEGG:ns NR:ns ## COG: asmA COG2982 # Protein_GI_number: 16130004 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in outer membrane biogenesis # Organism: Escherichia coli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gi|299856446|gb|ADWV01000005.1| GENE 202 211183 - 211764 735 193 aa, chain - ## HITS:1 COG:dcd KEGG:ns NR:ns ## COG: dcd COG0717 # Protein_GI_number: 16130005 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Escherichia coli K12 # 1 193 1 193 193 384 99.0 1e-107 MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTFRGHTAAFIDLSGPKDE VSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMV HVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSFEPLSGPAARPYNRREDAKYR NQQGAVASRIDKD >gi|299856446|gb|ADWV01000005.1| GENE 203 211856 - 212497 625 213 aa, chain - ## HITS:1 COG:ECs2873 KEGG:ns NR:ns ## COG: ECs2873 COG0572 # Protein_GI_number: 15832127 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Escherichia coli O157:H7 # 1 213 19 231 231 418 100.0 1e-117 MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEE RVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGI LLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFI EPSKQYADIIVPRGGKNRIAIDILKAKISQFFE >gi|299856446|gb|ADWV01000005.1| GENE 204 212815 - 216132 2698 1105 aa, chain + ## HITS:1 COG:yegE_2 KEGG:ns NR:ns ## COG: yegE_2 COG2202 # Protein_GI_number: 16130007 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Escherichia coli K12 # 301 670 1 370 370 773 99.0 0 MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRH AGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQN LADWLRLAFGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPH YLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFL TTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISES ETRFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDL QQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRT EQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVL PEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDM TEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPL LTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIG SVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFID LDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFI ATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRV TIYEPQQAAAHSERAAMSLDEQWRMIKENQLMMIAHGVASPRIPEARNLWLISLKLWNCE GEIIDEQTFRRSFSDPALSHALDRRVFHDFFQQAAKAVASKGISIALPLSVAGLSSATLV NDLLEQLENSPLPPRLLHLIIPAEAILDHAVSVQKLRLAGCRIVLSQVGRDLQIFNSLKA NMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVD LIYGDVIADAQPLDLLVNSSYFAIN >gi|299856446|gb|ADWV01000005.1| GENE 205 216171 - 216563 287 130 aa, chain - ## HITS:1 COG:alkA KEGG:ns NR:ns ## COG: alkA COG0122 # Protein_GI_number: 16130008 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase # Organism: Escherichia coli K12 # 2 125 157 280 282 246 99.0 9e-66 ATPQRLAAADPQALKALGMPLKRAEALIHLANAALEGSLPMTIPGDVEQAMKTLQTFPGI GRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTE GWQPDGTDEL Prediction of potential genes in microbial genomes Time: Sun May 15 15:14:23 2011 Seq name: gi|299856445|gb|ADWV01000006.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont5.1, whole genome shotgun sequence Length of sequence - 209587 bp Number of predicted genes - 208, with homology - 207 Number of transcription units - 116, operones - 44 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 1009 - 1068 3.9 2 2 Tu 1 . + CDS 1109 - 1753 977 ## COG0563 Adenylate kinase and related kinases + Term 1849 - 1880 2.5 + Prom 1905 - 1964 3.9 3 3 Tu 1 . + CDS 1989 - 2951 910 ## COG0276 Protoheme ferro-lyase (ferrochelatase) + Term 2976 - 3012 2.0 - Term 2864 - 2915 7.1 4 4 Tu 1 . - CDS 2948 - 3907 691 ## COG0657 Esterase/lipase - Prom 4028 - 4087 2.7 + Prom 3907 - 3966 1.7 5 5 Tu 1 . + CDS 4059 - 5363 1315 ## COG0524 Sugar kinases, ribokinase family + Term 5393 - 5458 3.1 - Term 5379 - 5444 3.1 6 6 Tu 1 . - CDS 5496 - 7172 501 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 - Prom 7274 - 7333 5.2 - Term 7364 - 7403 8.0 7 7 Tu 1 . - CDS 7410 - 8630 1206 ## COG0477 Permeases of the major facilitator superfamily + Prom 8744 - 8803 2.6 8 8 Tu 1 . + CDS 8848 - 10500 1938 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Term 10496 - 10531 7.4 9 9 Tu 1 5/0.209 - CDS 10537 - 11016 702 ## COG2606 Uncharacterized conserved protein - Prom 11154 - 11213 9.6 - Term 11119 - 11167 -0.1 10 10 Tu 1 . - CDS 11222 - 12016 689 ## COG3735 Uncharacterized protein conserved in bacteria - Prom 12100 - 12159 2.7 11 11 Tu 1 . + CDS 12100 - 12495 295 ## COG3093 Plasmid maintenance system antidote protein - Term 12561 - 12592 2.3 12 12 Tu 1 . - CDS 12609 - 15113 2820 ## COG2217 Cation transport ATPase - Prom 15356 - 15415 7.1 + Prom 15234 - 15293 3.4 13 13 Op 1 4/0.558 + CDS 15375 - 16307 921 ## COG2066 Glutaminase 14 13 Op 2 2/0.814 + CDS 16313 - 17602 1420 ## COG0531 Amino acid transporters + Prom 17628 - 17687 3.8 15 14 Tu 1 . + CDS 17727 - 18134 431 ## COG0789 Predicted transcriptional regulators 16 15 Op 1 26/0.000 - CDS 18135 - 18593 410 ## COG1585 Membrane protein implicated in regulation of membrane protease activity 17 15 Op 2 . - CDS 18590 - 19507 1435 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs - Prom 19603 - 19662 4.0 + Prom 19567 - 19626 3.8 18 16 Op 1 4/0.558 + CDS 19653 - 20330 180 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 19 16 Op 2 . + CDS 20317 - 21096 821 ## COG0390 ABC-type uncharacterized transport system, permease component + Term 21097 - 21147 13.7 - Term 21083 - 21124 5.5 20 17 Op 1 3/0.628 - CDS 21159 - 22013 1312 ## COG3118 Thioredoxin domain-containing protein 21 17 Op 2 5/0.209 - CDS 22074 - 22883 229 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 22 17 Op 3 . - CDS 22873 - 23529 568 ## COG2755 Lysophospholipase L1 and related esterases - Prom 23751 - 23810 1.9 23 18 Op 1 11/0.023 + CDS 23467 - 24153 313 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 24 18 Op 2 3/0.628 + CDS 24150 - 26564 2471 ## COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component + Term 26571 - 26624 5.5 + Prom 26891 - 26950 8.7 25 19 Op 1 . + CDS 26992 - 31281 1969 ## COG3209 Rhs family protein 26 19 Op 2 . + CDS 31345 - 31584 111 ## B21_00454 hypothetical protein + Prom 31586 - 31645 4.5 27 20 Tu 1 . + CDS 31689 - 32402 301 ## COG3209 Rhs family protein 28 21 Op 1 23/0.000 - CDS 32399 - 33265 201 ## COG2801 Transposase and inactivated derivatives 29 21 Op 2 . - CDS 33262 - 33561 305 ## COG2963 Transposase and inactivated derivatives + Prom 33572 - 33631 2.6 30 22 Op 1 . + CDS 33664 - 34155 361 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 31 22 Op 2 . + CDS 34152 - 35138 329 ## EcE24377A_1149 hypothetical protein + Term 35298 - 35329 4.1 - TRNA 35512 - 35599 68.6 # Ser GGA 0 0 + Prom 35714 - 35773 5.0 32 23 Op 1 3/0.628 + CDS 35833 - 36771 659 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 33 23 Op 2 5/0.209 + CDS 36826 - 37563 724 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family 34 23 Op 3 . + CDS 37587 - 38141 738 ## COG3381 Uncharacterized component of anaerobic dehydrogenases 35 23 Op 4 . + CDS 38213 - 38734 548 ## SSON_1045 hypothetical protein + Term 38768 - 38798 0.2 - Term 38756 - 38786 0.2 36 24 Op 1 . - CDS 38798 - 39631 804 ## COG1462 Uncharacterized protein involved in formation of curli polymers 37 24 Op 2 . - CDS 39658 - 40044 347 ## ECSP_1339 curli assembly protein CsgF 38 24 Op 3 . - CDS 40099 - 40488 120 ## APECO1_124 curli assembly protein CsgE 39 24 Op 4 . - CDS 40493 - 41143 149 ## COG2771 DNA-binding HTH domain-containing proteins + Prom 41773 - 41832 3.7 40 25 Op 1 . + CDS 41870 - 42352 299 ## ECH74115_1421 curlin minor subunit 41 25 Op 2 . + CDS 42393 - 42848 370 ## B21_01046 hypothetical protein + Term 42871 - 42899 1.0 42 26 Tu 1 . + CDS 42907 - 43239 210 ## ECS88_1055 putative autoagglutination protein 43 27 Tu 1 . + CDS 43360 - 43671 244 ## ECO103_1090 hypothetical protein + Prom 43684 - 43743 1.5 44 28 Op 1 . + CDS 43766 - 44077 179 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 45 28 Op 2 2/0.814 + CDS 44055 - 44300 125 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 46 28 Op 3 . + CDS 44302 - 45723 900 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Term 45640 - 45676 4.0 47 29 Tu 1 . - CDS 45731 - 46888 656 ## SSON_1060 glucans biosynthesis protein - Prom 47070 - 47129 3.2 + Prom 47015 - 47074 4.8 48 30 Op 1 7/0.116 + CDS 47264 - 48817 1598 ## COG3131 Periplasmic glucans biosynthesis protein 49 30 Op 2 4/0.558 + CDS 48840 - 51353 2268 ## COG2943 Membrane glycosyltransferase + Term 51484 - 51516 3.1 + Prom 51446 - 51505 3.2 50 31 Tu 1 . + CDS 51526 - 51753 306 ## COG5645 Predicted periplasmic lipoprotein - Term 51458 - 51512 4.2 51 32 Op 1 . - CDS 51754 - 52128 489 ## G2583_1310 acidic protein MsyB 52 32 Op 2 5/0.209 - CDS 52211 - 53437 752 ## COG0477 Permeases of the major facilitator superfamily - Prom 53491 - 53550 2.5 - Term 53487 - 53526 0.3 53 33 Tu 1 . - CDS 53609 - 54529 905 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 54655 - 54714 4.8 + Prom 54624 - 54683 5.9 54 34 Tu 1 . + CDS 54754 - 55806 798 ## COG1054 Predicted sulfurtransferase + Term 55813 - 55851 6.9 - Term 55792 - 55844 8.2 55 35 Op 1 12/0.000 - CDS 55848 - 56423 595 ## COG2353 Uncharacterized conserved protein 56 35 Op 2 . - CDS 56427 - 56993 364 ## COG3038 Cytochrome B561 - Prom 57052 - 57111 7.4 - Term 57173 - 57213 -0.5 57 36 Op 1 . - CDS 57254 - 57367 147 ## - Term 57374 - 57405 2.4 58 36 Op 2 . - CDS 57415 - 58533 856 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 58556 - 58615 2.2 - Term 58595 - 58623 0.6 59 37 Tu 1 . - CDS 58648 - 58902 225 ## ECH74115_1439 biofilm formation regulatory protein BssS - Prom 59104 - 59163 7.8 - Term 59143 - 59170 1.5 60 38 Op 1 . - CDS 59192 - 59437 216 ## UTI89_C1186 DNA damage-inducible protein I 61 38 Op 2 . - CDS 59511 - 60431 753 ## COG0418 Dihydroorotase - Prom 60594 - 60653 2.1 - Term 60627 - 60658 3.2 62 39 Tu 1 . - CDS 60663 - 61223 643 ## APECO1_145 hypothetical protein - Term 61305 - 61344 8.0 63 40 Op 1 1/0.860 - CDS 61357 - 62004 689 ## COG2999 Glutaredoxin 2 64 40 Op 2 . - CDS 62068 - 63276 1231 ## COG0477 Permeases of the major facilitator superfamily - Prom 63305 - 63364 2.1 + Prom 63357 - 63416 5.5 65 41 Op 1 5/0.209 + CDS 63512 - 64096 1067 ## PROTEIN SUPPORTED gi|15801183|ref|NP_287200.1| ribosomal-protein-S5-alanine N-acetyltransferase 66 41 Op 2 4/0.558 + CDS 64107 - 64754 851 ## COG3132 Uncharacterized protein conserved in bacteria 67 41 Op 3 5/0.209 + CDS 64756 - 65679 736 ## COG0673 Predicted dehydrogenases and related proteins + Term 65742 - 65770 3.0 68 42 Tu 1 . + CDS 65789 - 67324 1013 ## PROTEIN SUPPORTED gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 + Term 67332 - 67372 2.7 - Term 67316 - 67359 10.2 69 43 Op 1 7/0.116 - CDS 67364 - 67780 449 ## COG3418 Flagellar biosynthesis/type III secretory pathway chaperone 70 43 Op 2 8/0.047 - CDS 67785 - 68078 347 ## COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) 71 43 Op 3 . - CDS 68154 - 68792 326 ## COG1261 Flagellar basal body P-ring biosynthesis protein - Prom 68836 - 68895 3.9 72 44 Op 1 24/0.000 + CDS 68968 - 69384 476 ## COG1815 Flagellar basal body protein 73 44 Op 2 9/0.023 + CDS 69388 - 69792 318 ## COG1558 Flagellar basal body rod protein 74 44 Op 3 16/0.000 + CDS 69804 - 70499 834 ## COG1843 Flagellar hook capping protein 75 44 Op 4 8/0.047 + CDS 70524 - 71729 1309 ## COG1749 Flagellar hook protein FlgE 76 44 Op 5 8/0.047 + CDS 71749 - 72504 663 ## COG4787 Flagellar basal body rod protein + Prom 72524 - 72583 3.2 77 45 Op 1 9/0.023 + CDS 72642 - 73424 996 ## COG4786 Flagellar basal body rod protein + Term 73429 - 73468 2.5 78 45 Op 2 9/0.023 + CDS 73477 - 74175 765 ## COG2063 Flagellar basal body L-ring protein 79 45 Op 3 7/0.116 + CDS 74187 - 75284 941 ## COG1706 Flagellar basal-body P-ring protein 80 45 Op 4 9/0.023 + CDS 75284 - 76225 988 ## COG3951 Rod binding protein 81 45 Op 5 21/0.000 + CDS 76291 - 77934 1481 ## COG1256 Flagellar hook-associated protein 82 45 Op 6 . + CDS 77946 - 78899 864 ## COG1344 Flagellin and related hook-associated proteins + Term 78941 - 78981 10.3 - Term 79043 - 79074 3.2 83 46 Tu 1 . - CDS 79096 - 82281 3345 ## COG1530 Ribonucleases G and E + Prom 82694 - 82753 3.6 84 47 Tu 1 . + CDS 82854 - 83813 190 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 85 48 Tu 1 . - CDS 83925 - 84548 475 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation - Prom 84674 - 84733 3.1 + Prom 84504 - 84563 5.4 86 49 Op 1 20/0.000 + CDS 84708 - 85229 440 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein 87 49 Op 2 14/0.000 + CDS 85281 - 85454 292 ## PROTEIN SUPPORTED gi|15801206|ref|NP_287223.1| 50S ribosomal protein L32 88 49 Op 3 16/0.000 + CDS 85565 - 86605 681 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 89 49 Op 4 14/0.000 + CDS 86673 - 87626 931 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 90 49 Op 5 26/0.000 + CDS 87642 - 88571 1016 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 91 49 Op 6 22/0.000 + CDS 88584 - 89318 252 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 89347 - 89373 -0.6 + Prom 89431 - 89490 4.9 92 49 Op 7 27/0.000 + CDS 89529 - 89765 395 ## COG0236 Acyl carrier protein + Term 89774 - 89814 9.2 + Prom 89773 - 89832 1.9 93 49 Op 8 5/0.209 + CDS 89853 - 91094 1280 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase + Term 91120 - 91147 -0.1 + Prom 91135 - 91194 2.9 94 50 Op 1 6/0.140 + CDS 91214 - 92023 524 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 95 50 Op 2 10/0.023 + CDS 92026 - 93048 1149 ## COG1559 Predicted periplasmic solute-binding protein 96 50 Op 3 22/0.000 + CDS 93038 - 93679 797 ## COG0125 Thymidylate kinase 97 50 Op 4 10/0.023 + CDS 93676 - 94680 726 ## COG0470 ATPase involved in DNA replication 98 50 Op 5 6/0.140 + CDS 94691 - 95488 749 ## COG0084 Mg-dependent DNase + Prom 95629 - 95688 5.6 99 51 Tu 1 . + CDS 95783 - 97216 1620 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 97241 - 97271 3.0 - Term 97229 - 97258 2.8 100 52 Tu 1 . - CDS 97276 - 99465 2104 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Prom 99562 - 99621 4.2 101 53 Op 1 4/0.558 + CDS 99799 - 100158 474 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 102 53 Op 2 6/0.140 + CDS 100161 - 100538 191 ## COG5633 Predicted periplasmic lipoprotein 103 53 Op 3 6/0.140 + CDS 100552 - 101193 562 ## COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) 104 53 Op 4 5/0.209 + CDS 101174 - 101998 290 ## COG0510 Predicted choline kinase involved in LPS biosynthesis 105 53 Op 5 2/0.814 + CDS 102009 - 103034 1110 ## COG1472 Beta-glucosidase-related glycosidases 106 53 Op 6 2/0.814 + CDS 103057 - 103599 526 ## COG3150 Predicted esterase + Term 103605 - 103659 -0.8 + Prom 103909 - 103968 5.2 107 54 Tu 1 . + CDS 104008 - 105312 1349 ## COG1252 NADH dehydrogenase, FAD-containing subunit + Term 105379 - 105424 3.9 + Prom 105419 - 105478 2.1 108 55 Tu 1 . + CDS 105539 - 106078 578 ## COG3134 Predicted outer membrane lipoprotein + Term 106101 - 106140 3.1 - Term 106057 - 106093 -0.4 109 56 Tu 1 . - CDS 106140 - 106850 422 ## COG1309 Transcriptional regulator - Prom 106909 - 106968 10.0 + Prom 106845 - 106904 9.8 110 57 Tu 1 . + CDS 107013 - 107270 282 ## ECO103_1157 hypothetical protein + Term 107309 - 107348 10.2 - Term 107258 - 107291 0.8 111 58 Tu 1 . - CDS 107353 - 108312 885 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 108335 - 108394 4.9 112 59 Tu 1 . - CDS 108459 - 111905 3824 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) - Prom 111970 - 112029 2.7 113 60 Tu 1 . - CDS 112033 - 113106 1019 ## COG4763 Predicted membrane protein - Prom 113235 - 113294 2.5 + Prom 113283 - 113342 4.4 114 61 Op 1 23/0.000 + CDS 113368 - 114567 1425 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 115 61 Op 2 23/0.000 + CDS 114560 - 115261 226 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 116 61 Op 3 5/0.209 + CDS 115267 - 116505 1295 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component 117 61 Op 4 5/0.209 + CDS 116534 - 117445 831 ## COG1940 Transcriptional regulator/sugar kinase 118 61 Op 5 . + CDS 117461 - 118282 623 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 119 62 Op 1 . - CDS 118421 - 119209 425 ## ECO103_1166 putative inner membrane protein 120 62 Op 2 . - CDS 119206 - 119667 163 ## ECO111_1399 putative inner membrane protein - Term 119678 - 119720 6.4 121 63 Op 1 25/0.000 - CDS 119725 - 120771 1478 ## COG0687 Spermidine/putrescine-binding periplasmic protein 122 63 Op 2 36/0.000 - CDS 120768 - 121562 985 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 123 63 Op 3 30/0.000 - CDS 121559 - 122386 964 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 124 63 Op 4 . - CDS 122400 - 123518 1281 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components - Prom 123603 - 123662 4.0 + Prom 123620 - 123679 5.9 125 64 Tu 1 . + CDS 123786 - 125012 1511 ## COG2195 Di- and tripeptidases - Term 125008 - 125045 9.1 126 65 Op 1 2/0.814 - CDS 125061 - 126182 1221 ## COG2850 Uncharacterized conserved protein 127 65 Op 2 40/0.000 - CDS 126258 - 127718 1268 ## COG0642 Signal transduction histidine kinase 128 65 Op 3 4/0.558 - CDS 127718 - 128389 816 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 128452 - 128511 5.5 - Term 128505 - 128548 9.1 129 66 Op 1 9/0.023 - CDS 128557 - 129927 1713 ## COG0015 Adenylosuccinate lyase 130 66 Op 2 4/0.558 - CDS 129931 - 130572 736 ## COG2915 Uncharacterized protein involved in purine metabolism 131 66 Op 3 6/0.140 - CDS 130608 - 131714 1395 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 132 66 Op 4 3/0.628 - CDS 131768 - 132229 414 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 133 66 Op 5 . - CDS 132239 - 132862 449 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 132884 - 132943 6.5 + Prom 132890 - 132949 4.4 134 67 Tu 1 . + CDS 133064 - 134314 1556 ## COG0538 Isocitrate dehydrogenases + Term 134337 - 134373 7.2 - Term 135188 - 135218 1.8 135 68 Tu 1 . - CDS 135436 - 135840 111 ## COG5562 Phage envelope protein - Prom 135970 - 136029 2.6 136 69 Tu 1 . - CDS 136061 - 136792 402 ## COG0789 Predicted transcriptional regulators - Prom 136859 - 136918 7.3 - Term 136831 - 136878 4.6 137 70 Tu 1 . - CDS 136997 - 138208 464 ## COG2200 FOG: EAL domain - Prom 138381 - 138440 6.8 + Prom 138340 - 138399 6.5 138 71 Tu 1 . + CDS 138522 - 138758 205 ## ECS88_1225 hypothetical protein + Term 138864 - 138906 3.3 + Prom 139023 - 139082 3.7 139 72 Tu 1 . + CDS 139102 - 139368 263 ## B21_01149 hypothetical protein + Prom 139397 - 139456 4.9 140 73 Tu 1 . + CDS 139553 - 139729 229 ## B21_01150 hypothetical protein + Term 139841 - 139872 1.8 + Prom 139764 - 139823 4.4 141 74 Tu 1 . + CDS 140061 - 141584 634 ## COG2200 FOG: EAL domain + Prom 141628 - 141687 6.7 142 75 Tu 1 . + CDS 141716 - 141934 113 ## c1611 hypothetical protein + Prom 142222 - 142281 6.0 143 76 Tu 1 . + CDS 142334 - 142543 141 ## COG3468 Type V secretory pathway, adhesin AidA + Prom 142688 - 142747 2.5 144 77 Tu 1 . + CDS 142951 - 144981 960 ## COG3468 Type V secretory pathway, adhesin AidA - Term 144988 - 145024 5.2 145 78 Op 1 . - CDS 145038 - 145367 448 ## ECO111_1498 hypothetical protein 146 78 Op 2 . - CDS 145377 - 145721 356 ## EcSMS35_1978 hypothetical protein 147 78 Op 3 . - CDS 145723 - 145896 88 ## ECDH10B_1224 hypothetical protein - Prom 145988 - 146047 6.9 + Prom 146037 - 146096 7.1 148 79 Tu 1 . + CDS 146315 - 146641 206 ## COG3468 Type V secretory pathway, adhesin AidA + Term 146657 - 146685 1.0 - Term 146948 - 146988 7.0 149 80 Op 1 22/0.000 - CDS 147013 - 147279 454 ## COG0851 Septum formation topological specificity factor 150 80 Op 2 22/0.000 - CDS 147283 - 148095 871 ## COG2894 Septum formation inhibitor-activating ATPase 151 80 Op 3 . - CDS 148119 - 148814 431 ## COG0850 Septum formation inhibitor - Prom 148962 - 149021 4.5 + Prom 149057 - 149116 4.6 152 81 Tu 1 . + CDS 149340 - 149702 75 ## ECO103_1278 hypothetical protein + Term 149790 - 149830 2.1 153 82 Tu 1 . - CDS 149822 - 150223 363 ## ECBD_2444 peptidase domain protein - Prom 150257 - 150316 4.6 + Prom 150214 - 150273 6.6 154 83 Op 1 2/0.814 + CDS 150465 - 150758 325 ## COG3100 Uncharacterized protein conserved in bacteria 155 83 Op 2 1/0.860 + CDS 150830 - 151489 701 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 156 83 Op 3 . + CDS 151566 - 152027 492 ## COG2983 Uncharacterized conserved protein 157 84 Tu 1 . - CDS 152234 - 153145 733 ## ECH74115_1668 hemolysin E - Prom 153165 - 153224 3.8 158 85 Op 1 4/0.558 + CDS 153518 - 153937 335 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 159 85 Op 2 . + CDS 153937 - 155205 527 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Term 155212 - 155242 3.0 160 86 Tu 1 . - CDS 155251 - 155781 671 ## COG1495 Disulfide bond formation protein DsbB - Prom 155861 - 155920 4.2 - Term 155885 - 155916 4.1 161 87 Tu 1 . - CDS 155927 - 157468 1681 ## COG3067 Na+/H+ antiporter - Prom 157516 - 157575 5.5 + Prom 157598 - 157657 4.6 162 88 Tu 1 . + CDS 157690 - 158409 764 ## COG2186 Transcriptional regulators + Term 158427 - 158463 2.3 - Term 158419 - 158447 1.0 163 89 Tu 1 . - CDS 158461 - 159993 1534 ## COG2719 Uncharacterized conserved protein - Prom 160238 - 160297 4.4 + Prom 160218 - 160277 5.8 164 90 Op 1 7/0.116 + CDS 160323 - 161621 1392 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 165 90 Op 2 . + CDS 161631 - 162701 942 ## COG0787 Alanine racemase 166 91 Tu 1 . + CDS 162804 - 162953 67 ## gi|188493462|ref|ZP_03000732.1| hypothetical protein Ec53638_4549 167 92 Op 1 1/0.860 - CDS 163087 - 164823 1714 ## COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain - Prom 164845 - 164904 1.7 - Term 164850 - 164883 -0.4 168 92 Op 2 . - CDS 164918 - 165832 806 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF - Prom 165860 - 165919 2.6 169 93 Op 1 . + CDS 165805 - 165993 77 ## gi|293409572|ref|ZP_06653148.1| predicted protein 170 93 Op 2 . + CDS 165932 - 166543 527 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 166663 - 166706 1.7 171 94 Tu 1 . - CDS 166545 - 167279 590 ## COG5581 Predicted glycosyltransferase - Prom 167515 - 167574 2.3 + Prom 167306 - 167365 3.6 172 95 Tu 1 . + CDS 167480 - 167734 299 ## COG2261 Predicted membrane protein + Term 167747 - 167788 6.2 + Prom 167864 - 167923 4.7 173 96 Tu 1 . + CDS 168056 - 168352 132 ## EcE24377A_1342 hypothetical protein 174 97 Tu 1 . - CDS 168431 - 170128 1700 ## COG1626 Neutral trehalase - Prom 170215 - 170274 5.5 - Term 170398 - 170438 8.1 175 98 Op 1 2/0.814 - CDS 170448 - 171866 1182 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 176 98 Op 2 10/0.023 - CDS 171877 - 172509 685 ## COG2376 Dihydroxyacetone kinase 177 98 Op 3 . - CDS 172520 - 173590 1095 ## COG2376 Dihydroxyacetone kinase - Prom 173684 - 173743 4.9 + Prom 173726 - 173785 6.2 178 99 Tu 1 . + CDS 173818 - 175737 1306 ## COG3284 Transcriptional activator of acetoin/glycerol metabolism 179 100 Tu 1 . - CDS 175837 - 178704 1352 ## COG3468 Type V secretory pathway, adhesin AidA - Term 179457 - 179486 2.1 180 101 Op 1 14/0.000 - CDS 179547 - 180638 1284 ## COG0012 Predicted GTPase, probable translation factor - Prom 180671 - 180730 2.4 - Term 180711 - 180743 0.7 181 101 Op 2 . - CDS 180755 - 181339 459 ## COG0193 Peptidyl-tRNA hydrolase - Prom 181369 - 181428 4.2 + Prom 181505 - 181564 3.7 182 102 Tu 1 . + CDS 181617 - 181895 273 ## LF82_2742 uncharacterized protein YchH + Term 181903 - 181960 6.6 - Term 181892 - 181945 5.0 183 103 Tu 1 . - CDS 181950 - 183602 1937 ## COG0659 Sulfate permease and related transporters (MFS superfamily) - Term 183702 - 183741 4.1 184 104 Op 1 13/0.000 - CDS 183754 - 184767 1012 ## COG0462 Phosphoribosylpyrophosphate synthetase - Term 184806 - 184832 0.3 185 104 Op 2 13/0.000 - CDS 184852 - 185703 550 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 186 104 Op 3 . - CDS 185703 - 186326 547 ## COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis - Prom 186467 - 186526 6.0 + Prom 186442 - 186501 4.0 187 105 Op 1 9/0.023 + CDS 186540 - 187796 1284 ## COG0373 Glutamyl-tRNA reductase 188 105 Op 2 32/0.000 + CDS 187838 - 188920 1163 ## COG0216 Protein chain release factor A 189 105 Op 3 6/0.140 + CDS 188920 - 189753 482 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase 190 105 Op 4 6/0.140 + CDS 189750 - 190142 402 ## COG3094 Uncharacterized protein conserved in bacteria 191 105 Op 5 8/0.047 + CDS 190146 - 190955 719 ## COG2912 Uncharacterized conserved protein 192 105 Op 6 . + CDS 190991 - 191845 1139 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase + Term 191868 - 191904 4.1 - Term 191907 - 191944 6.0 193 106 Tu 1 . - CDS 191994 - 192128 116 ## SBO_1851 hypothetical protein - Prom 192153 - 192212 2.7 - Term 192442 - 192479 6.0 194 107 Tu 1 . - CDS 192529 - 192663 120 ## SBO_1851 hypothetical protein - Prom 192821 - 192880 1.8 - Term 192978 - 193015 6.0 195 108 Tu 1 . - CDS 193065 - 193199 121 ## SBO_1851 hypothetical protein - Term 193519 - 193573 4.8 196 109 Tu 1 . - CDS 193577 - 194677 1124 ## COG0387 Ca2+/H+ antiporter - Prom 194724 - 194783 4.4 + Prom 194772 - 194831 4.8 197 110 Tu 1 . + CDS 194947 - 195177 283 ## COG4572 Putative cation transport regulator + Prom 195213 - 195272 2.9 198 111 Tu 1 . + CDS 195356 - 196030 588 ## COG3703 Uncharacterized protein involved in cation transport - Term 196026 - 196071 1.9 199 112 Tu 1 . - CDS 196074 - 196427 367 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction - Prom 196461 - 196520 2.7 + Prom 196529 - 196588 3.3 200 113 Tu 1 . + CDS 196654 - 198006 771 ## EcE24377A_1370 hypothetical protein + Term 198109 - 198148 0.8 201 114 Op 1 8/0.047 - CDS 198007 - 198657 867 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 202 114 Op 2 . - CDS 198650 - 200446 1476 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific - Prom 200606 - 200665 8.3 + Prom 200175 - 200234 3.1 203 115 Op 1 . + CDS 200472 - 200690 118 ## ECIAI1_1245 hypothetical protein + Prom 200700 - 200759 1.8 204 115 Op 2 10/0.023 + CDS 200785 - 202176 1113 ## COG2223 Nitrate/nitrite transporter + Term 202323 - 202353 3.4 + Prom 202443 - 202502 5.7 205 116 Op 1 13/0.000 + CDS 202692 - 206435 4567 ## COG5013 Nitrate reductase alpha subunit 206 116 Op 2 12/0.000 + CDS 206432 - 207970 1896 ## COG1140 Nitrate reductase beta subunit 207 116 Op 3 12/0.000 + CDS 207967 - 208677 882 ## COG2180 Nitrate reductase delta subunit 208 116 Op 4 . + CDS 208677 - 209354 894 ## COG2181 Nitrate reductase gamma subunit + Term 209374 - 209405 1.6 Predicted protein(s) >gi|299856445|gb|ADWV01000006.1| GENE 1 2 - 928 1419 308 aa, chain + ## HITS:1 COG:ZhtpG KEGG:ns NR:ns ## COG: ZhtpG COG0326 # Protein_GI_number: 15800202 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Escherichia coli O157:H7 EDL933 # 1 308 317 624 624 567 100.0 1e-162 YLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQ QFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITAD SYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADE VDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAA AGQKVPEVKYIFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIR RMNQLLVS >gi|299856445|gb|ADWV01000006.1| GENE 2 1109 - 1753 977 214 aa, chain + ## HITS:1 COG:ECs0527 KEGG:ns NR:ns ## COG: ECs0527 COG0563 # Protein_GI_number: 15829781 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Escherichia coli O157:H7 # 1 214 1 214 214 402 99.0 1e-112 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDVGKLVT DELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRI VGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIG YYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG >gi|299856445|gb|ADWV01000006.1| GENE 3 1989 - 2951 910 320 aa, chain + ## HITS:1 COG:ECs0528 KEGG:ns NR:ns ## COG: ECs0528 COG0276 # Protein_GI_number: 15829782 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Escherichia coli O157:H7 # 1 320 1 320 320 622 99.0 1e-178 MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPR VAKLYASVWMEDGSPLMVYSRQQQQALAQRLPDTPVALGMSYGSPSLESAVDELLAEHVD HIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIRDYADNHDYINALANSVRASF AKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMAPEKVMMTFQSRFGRE PWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIP ALNATPEHIEMMANLVAAYR >gi|299856445|gb|ADWV01000006.1| GENE 4 2948 - 3907 691 319 aa, chain - ## HITS:1 COG:aes KEGG:ns NR:ns ## COG: aes COG0657 # Protein_GI_number: 16128460 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Escherichia coli K12 # 1 319 1 319 319 656 98.0 0 MKPENKLPVLDLISAEMKTVVNTLQSDLPSWPATGTIAEQRQYYTLERRFWNAGAPEMAT RAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDTHDRIMRLLASYSQCTVIG IDYPLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIGFAGDSAGAMLALASALWLRD KQIDCGKIAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYY CLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRM MKTADEALRDGAQFFTAQL >gi|299856445|gb|ADWV01000006.1| GENE 5 4059 - 5363 1315 434 aa, chain + ## HITS:1 COG:ECs0530 KEGG:ns NR:ns ## COG: ECs0530 COG0524 # Protein_GI_number: 15829784 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 434 1 434 434 914 100.0 0 MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLVDIEAKVDDEFIERYGL SAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNI EIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRAESIP EDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKKYNVPVVLTLGTKFVIAENPQWW QQFLKDHVSILAMNEDEAEALTGESDPLLASDKALDWVDLVLCTAGPIGLYMAGFTEDEA KRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPLRVYSHIAPYMGGPEKIMNTNGAGDGA LAALLHDITANSYHRSNVPNSSKHKFTWLTYSSLAQVCKYANRVSYQVLNQHSPRLTRGL PEREDSLEESYWDR >gi|299856445|gb|ADWV01000006.1| GENE 6 5496 - 7172 501 558 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 4 522 5 513 618 197 26 3e-49 MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAGPFTPGFVADTKLAPEL AELGVILLMFGVGLHFSLKDLMAVKAIAIPGAIAQIAVATLLGMALSAVLGWSLMTGIVF GLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLVMVLTLVLLPAVAGMMEQGDV GFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARSAATGSRELFTLSVLALALGIAF GAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPLILIQ QPLAVLATLAIILFGKSLAAFFLVRLFGHSQRTALTIAASLAQIGEFAFILAGLGMALNL LPQAGQNLVLAGAILSIMLNPVLFALLEKYLAKTETLEEQTLEEAIEEEKQIPVDICNHA LLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLE CAKWLILTIPNGYEAGEIVASARAKNPDIEIIARAHYDDEVTYITERGANQVVMGEREIA RTMLELLETPPAGEVVTG >gi|299856445|gb|ADWV01000006.1| GENE 7 7410 - 8630 1206 406 aa, chain - ## HITS:1 COG:fsr KEGG:ns NR:ns ## COG: fsr COG0477 # Protein_GI_number: 16128463 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 406 1 406 406 676 100.0 0 MAMSEQPQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLILAIYPLLQSEFSLTFM QIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLSGLVLLALAGSFGAVLLAA ALVGTGSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFGSSLGPLLAAVIIAPYGKGNV AWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIINPLPRNKVVLAVSILLILIFSKY FYMASISSYYTFYLMQKFGLSIQNAQLHLFAFLFAVAAGTVIGGPVGDKIGRKYVIWGSI LGVAPFTLILPYASLHWTGVLTVIIGFILASAFSAILVYAQELLPGRIGMVSGLFFGFAF GMGGLGAAVLGLIADHTSIELVYKICAFLPLLGMLTIFLPDNRHKD >gi|299856445|gb|ADWV01000006.1| GENE 8 8848 - 10500 1938 550 aa, chain + ## HITS:1 COG:ushA KEGG:ns NR:ns ## COG: ushA COG0737 # Protein_GI_number: 16128464 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Escherichia coli K12 # 1 550 1 550 550 1117 100.0 0 MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHGHFWRNEYGEYGLAAQK TLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFD NPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGN PEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARAL PAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADF EFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQL EVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIEAGDISY KNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPDSGAYPQFANVSFVAKDGKLNDLKI KGEPVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSV YEPKGEVSWQ >gi|299856445|gb|ADWV01000006.1| GENE 9 10537 - 11016 702 159 aa, chain - ## HITS:1 COG:ybaK KEGG:ns NR:ns ## COG: ybaK COG2606 # Protein_GI_number: 16128465 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 159 1 159 159 290 99.0 1e-78 MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQVYKTLLVAVNGDMKHLA VAVTPVAGQLDLKKVAKALGAKKVEMADPMAAQRSTGYLVGGISPLGQKKRLPTIIDAPA QEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD >gi|299856445|gb|ADWV01000006.1| GENE 10 11222 - 12016 689 264 aa, chain - ## HITS:1 COG:ybaP KEGG:ns NR:ns ## COG: ybaP COG3735 # Protein_GI_number: 16128466 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 264 1 264 264 504 99.0 1e-143 MDLLYRVKTLWAALRGNHYSWPAIDITLPGNRHFHLIGSIHMGSHDMAPLPTRLLKKLKN ADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHISQEMGISPSLFSTQPLWQI AMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEGAENQIAMLLQLPDKGLALLD DTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQSLYDVLMHQRNLAWRDKLRAMP PGRYVVAVGALHLYGEGNLPQMLR >gi|299856445|gb|ADWV01000006.1| GENE 11 12100 - 12495 295 131 aa, chain + ## HITS:1 COG:ECs0536 KEGG:ns NR:ns ## COG: ECs0536 COG3093 # Protein_GI_number: 15829790 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 225 98.0 2e-59 MIQYVLASLFTGKQQLKTMKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVS ALINNNRKLTTEMAFRLAKVFDTTVDFRLNLQAAVDLWEVENNMRTQEELGRIETVAEYL ARREERAKKVA >gi|299856445|gb|ADWV01000006.1| GENE 12 12609 - 15113 2820 834 aa, chain - ## HITS:1 COG:ybaR KEGG:ns NR:ns ## COG: ybaR COG2217 # Protein_GI_number: 16128468 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Escherichia coli K12 # 1 834 1 834 834 1468 99.0 0 MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVTGTASAEQLIETIKQAG YDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQLLLSGMSCASCVTRVQNA LQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAVA TMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSLWLVIGLITLAVMVFAGGHFYRS AWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGH MLEARARQRSSKALEKLLDLTPPTARLVTDEGEKSVPLAEVQPGMLLRLTTGDRVPVDGE ITQGEAWLDEAMLTGEPIPQQKGEGKSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVR QAQSSKPEIGQLADKISAVFVPVVVVIALISAAIWYFFGPAPQIVYTLVIATTVLIIACP CALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTVVFDKTGTLTEGKPQVVAVKT FADVDEAQALRLAAALEQGSSHPLARAILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHAL LLGNQALLNEQQVGTKAIEAEITAQASQGATPVLLAIDGKAVALLAVRDPLRSDSVAALQ RLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGD GINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLG AFIYNSIGIPVAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE >gi|299856445|gb|ADWV01000006.1| GENE 13 15375 - 16307 921 310 aa, chain + ## HITS:1 COG:ybaS KEGG:ns NR:ns ## COG: ybaS COG2066 # Protein_GI_number: 16128469 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Escherichia coli K12 # 1 310 1 310 310 605 99.0 1e-173 MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAAVAIVTCDGKVYSAGDSDY RFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVIALELHGGKPLSPLVNAGA IATTSLINAENVEQRWQRILHIQQQLAGEQVALSDEVNQSEQTTNFHNRAIAWLLYSAGY LYCDAMEACDVYTRQCSTLLNTVELATLGATLAAGGVNPLTHKRVLQADNVPYILAEMMM EGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGIAAFSPPLDEEGNSVRGQKMVASVA KQLGYNVFKG >gi|299856445|gb|ADWV01000006.1| GENE 14 16313 - 17602 1420 429 aa, chain + ## HITS:1 COG:ybaT KEGG:ns NR:ns ## COG: ybaT COG0531 # Protein_GI_number: 16128470 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 429 2 430 430 668 100.0 0 MNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSG YAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTLAVSIAMVARAFGAYAVQFL HEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAGVWSLQP AHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLLY ISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVF NIMDNMGSERELPKLMNKSLWRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYL AVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLWSQGSRALIWIIGSLLLSLIVA MVMKRNKTV >gi|299856445|gb|ADWV01000006.1| GENE 15 17727 - 18134 431 135 aa, chain + ## HITS:1 COG:ybbI KEGG:ns NR:ns ## COG: ybbI COG0789 # Protein_GI_number: 16128471 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 135 1 135 135 266 100.0 8e-72 MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNL EESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPGDDSADC PIIENLSGCCHHRAG >gi|299856445|gb|ADWV01000006.1| GENE 16 18135 - 18593 410 152 aa, chain - ## HITS:1 COG:ybbJ KEGG:ns NR:ns ## COG: ybbJ COG1585 # Protein_GI_number: 16128472 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Escherichia coli K12 # 2 152 1 151 151 241 100.0 3e-64 MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLVPLGWEWQGVMF AILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSS WPVSASEDLGAGTHVEVIAIEGITLHIRAVSS >gi|299856445|gb|ADWV01000006.1| GENE 17 18590 - 19507 1435 305 aa, chain - ## HITS:1 COG:ECs0552 KEGG:ns NR:ns ## COG: ECs0552 COG0330 # Protein_GI_number: 15829806 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 536 100.0 1e-152 MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKIN MMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVL GSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAER TKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVS EAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSAN KRTQP >gi|299856445|gb|ADWV01000006.1| GENE 18 19653 - 20330 180 225 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 7 208 1 210 245 73 30 5e-12 MQENSPLLQLQNVGYLAGDTKILNNINFSLRAGEFKLITGPSGCGKSTLLKIVASLISPT SGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDF LERFALPDSILTKDIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEMI HRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYELA >gi|299856445|gb|ADWV01000006.1| GENE 19 20317 - 21096 821 259 aa, chain + ## HITS:1 COG:ECs0554 KEGG:ns NR:ns ## COG: ECs0554 COG0390 # Protein_GI_number: 15829808 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 259 10 268 268 443 99.0 1e-124 MNSHNITNESLALALMLVVVAILISHKEKLALEKDILWSVGRAIIQLIIVGYVLKYIFSV DDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFVAITVGAGITLAVLILSGSIEFIP MQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKLSLGATPKQASAILIRDSIRA ALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASLSTIIACYLT YRKFYNSRHQLVVTQLKKK >gi|299856445|gb|ADWV01000006.1| GENE 20 21159 - 22013 1312 284 aa, chain - ## HITS:1 COG:ECs0555 KEGG:ns NR:ns ## COG: ECs0555 COG3118 # Protein_GI_number: 15829809 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Escherichia coli O157:H7 # 1 284 13 296 296 483 100.0 1e-136 MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAK LDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQ AMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQDQD TRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLF GHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY >gi|299856445|gb|ADWV01000006.1| GENE 21 22074 - 22883 229 269 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 14 268 3 249 259 92 32 1e-17 MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNSMGF TGVLIDLDSPESVDRAADEVIALTDNCLYGIFNNAGFGMYGPLSTISRAQMEQQFSANFF GAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHS GIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVDKVRHAFISEKPKM RYPVTLVTWAVMVLKRLLPGRVMDKILQG >gi|299856445|gb|ADWV01000006.1| GENE 22 22873 - 23529 568 218 aa, chain - ## HITS:1 COG:tesA KEGG:ns NR:ns ## COG: tesA COG2755 # Protein_GI_number: 16128478 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Escherichia coli K12 # 11 218 1 208 208 404 100.0 1e-113 MLPLTDGLLKMMNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSASAAWP ALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQT EQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPFFMEEV YLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS >gi|299856445|gb|ADWV01000006.1| GENE 23 23467 - 24153 313 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 25 228 20 223 223 125 36 2e-27 MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLD DGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESS AESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQ TGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLRLVNGQLQEEA >gi|299856445|gb|ADWV01000006.1| GENE 24 24150 - 26564 2471 804 aa, chain + ## HITS:1 COG:ybbP KEGG:ns NR:ns ## COG: ybbP COG3127 # Protein_GI_number: 16128480 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component # Organism: Escherichia coli K12 # 1 804 1 804 804 1431 99.0 0 MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLSQQSREFMAGDRALRSS REVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAVDDIYPMYGDLQTNPPGLK PQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQEPDSGFNPFQMAPRLMMNLAD VDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLKPEQRWYGLEQDEGALGRSMERS QQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAILKTLGAGRAQLRKLIVGQWLMVLT LSAVTGGAIGLLFENVLMVLLKPVLPAALPPASLWPWLWALGTMTVISLLVGLRPYRLLL ATQPLRVLRNDVVANVWPLKFYLPIVSVVVVLLLAGLMGGSMLLWAVLAGAVVLALLCGV LGWMLLNVLRRMTLKSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDR WQQQLPPESPNYFLINIATEQVAPLKAFLAEHHIVPESFYPVVRARLTAINDKPTEGNED EALNRELNLTWQNTRPDHNPIVAGNWPPKADEVSMEEGLAKRLNVALGDTVTFMGDTQEF RAKVTSLRKVDWESLRPNFYFIFPEGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISL LDIGAILKQVGQVLEQVSRALEVMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAG KKLLRTTLWCEFAMLGFVSGLVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLPCSGALL LSLFGGWLGARLVKGKALFRQFAG >gi|299856445|gb|ADWV01000006.1| GENE 25 26992 - 31281 1969 1429 aa, chain + ## HITS:1 COG:rhsD KEGG:ns NR:ns ## COG: rhsD COG3209 # Protein_GI_number: 16128481 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 1429 1 1426 1426 2721 97.0 0 MSGKPAARQGDMTQYGGPIVQGSAGVRIGAPTGVACSVCPGGMTSGNPVNPLLGAKVLPG ETDLALPGPLPFILSRTYSSYRTKTPAPVGVFGPGWKAPSDIRLQLRDDGLILNDNGGRS IHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLARLWGALPPDIRLSPHLYLATNSAQ GPWWILGWSELVPGAEDVLPAPLPPYRVLTGLADRFGRTLTYRREAAGDLAGEITGVTDG AGREFRLVLTTQAQRAEEARKQRTASLSSPDTPRPLSASAFPDTLPGTEYGPDRGIRLSA VWLMHDPAYPESLPGAPLARYTYTEAGELLAVYDRSNTQVRAFTYDAQHPGRMVAHRYAG RPEMRYRYDDTGRVVEQLNPAGLSYRYLYEQDRITVTDSLNRREVLHTEGGAGLKRVVKK ELADGSVTRSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPDGRETKFYYNDGNQ LTAVVSPDGLESRREYDEPGRLVSETSRSGETVRYRYDDAHSELPATTTDATGSTRQMTW SRYGQLLAFTDCSGYQTRYEYDRFGQMTAVHREEGISLYRRYDNRGRLTSVKDAQGRETR YEYNAAGDLTAVITPDGNRSETQYDAWGKAVSTTQGGLTRSMEYDAAGRVISLTNENGSH SVFSYDALDRLVQQGGFDGRTQRYHYDLTGKLTQSEDEGLVTLWHYDASDRITHRTVNGD PAEQWQYDGHGWLRDISHLSEGHRVAVHYGYDDKGRLTGERQTVENPETGELLWQHETKH AYNEQGLANRVTPDSLPPVEWLTYGSGYLAGMKLGGTPLVEYTRDRLHRETVRSFGSRAG SNAAYELTSTYTPAGQLQSQHLNSLVYDRDYGWNDNGDLVRISGPRQTREYGYSATGRLE SVRTLAPDLDIRIPYATDPAGNRLPDPELHPDSTLTVWPDNRIAKDAHYVYHYDEYGRLT EKTDRIPAGVIRTDDERTHHYHYDSLHRLVHYIRIQYEEPLVESRYLYDPLGRRTGKRVW RRERDLTGWMSLSRKPEVTWYGWDGDRLTTVQTDTTRIQTVYQPGSFAPLIRIETDNGER EKAQRRSLAEKLQQEGSEDGHGVVFPAELVRLLDRLEEEIRADRVSSESRAWLAQCGLTV EQLARQVEPEYTPARKAHLYHCDHRGLPLALISEDGNTAWSAEYDEWGNQLNEENPHHVY QPYRLPGQQHDEESGLYYNRHRYYDPLQGRYITQDPMGLKGGWNLYQYPLNPLQQIDPMG LLQTWDDARSGACTGGVCGVLSRIIGPSKFDSTADAALDALKETQNRSLCNDMEYSGIVC KDTNGKYFASKAETDNLRKESYPLKRKCPTGTDRVAAYHTHGADSHGDYVDEFFSSSDKN LVRSKDNNLEAFYLATPDGRFEALNNKGEYIFIRNSVPGLSSVCIPYHD >gi|299856445|gb|ADWV01000006.1| GENE 26 31345 - 31584 111 79 aa, chain + ## HITS:1 COG:no KEGG:B21_00454 NR:ns ## KEGG: B21_00454 # Name: ybbC # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 79 9 87 122 149 100.0 3e-35 MLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKYSVKNTVKTETMAIQLAEIYVRYRY GERIAEEEKPYLITELPDS >gi|299856445|gb|ADWV01000006.1| GENE 27 31689 - 32402 301 237 aa, chain + ## HITS:1 COG:Z0651 KEGG:ns NR:ns ## COG: Z0651 COG3209 # Protein_GI_number: 15800234 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 EDL933 # 2 226 1164 1388 1398 453 93.0 1e-127 MLALMDADGNIAWSGEYDEWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRNRYYDPL QGRYITQDPIGLEGGWSLYAYPLNPVNGIDPLGLSPADVALMRKKEQLNHQRAWDILSDT YDDMKRLNLGGTDQFFHCMAFCRVSKLNDAGVSRSAKGLGYEKEIRDYGLNMFGMYGRKV KLSHSEMIEDNKKDLAVNEHGLTCPLTQDCSNRCIDYINPEHKKTINDPTHVIWTQA >gi|299856445|gb|ADWV01000006.1| GENE 28 32399 - 33265 201 288 aa, chain - ## HITS:1 COG:tra5_g1 KEGG:ns NR:ns ## COG: tra5_g1 COG2801 # Protein_GI_number: 16128357 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 288 1 288 288 578 100.0 1e-165 MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRS KQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLE QDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMA LWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVE CIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA >gi|299856445|gb|ADWV01000006.1| GENE 29 33262 - 33561 305 99 aa, chain - ## HITS:1 COG:b0298 KEGG:ns NR:ns ## COG: b0298 COG2963 # Protein_GI_number: 16128283 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 99 4 102 102 114 100.0 6e-26 MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSS ERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK >gi|299856445|gb|ADWV01000006.1| GENE 30 33664 - 34155 361 163 aa, chain + ## HITS:1 COG:RC1116 KEGG:ns NR:ns ## COG: RC1116 COG0331 # Protein_GI_number: 15893039 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Rickettsia conorii # 11 138 161 287 314 66 32.0 2e-11 MITESGIALDISCDNTPRQQVIGGTQASLNEFATLLMAAGYEPVKLGVSGAWHTRLMEDG VQAMRDYLAGLDIASPEHQVLMNVTAKSEVAPSIIKENLSLHLTHTVKWTESLDIFLNMP TPVAFLEISNKPYLGNMLNDFAGVDQQRVMHCRKAFSDAKVFK >gi|299856445|gb|ADWV01000006.1| GENE 31 34152 - 35138 329 328 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_1149 NR:ns ## KEGG: EcE24377A_1149 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 328 1 328 328 555 100.0 1e-156 MIPDYLTFIRFQDKRNLIYIYAIGLILIGFYWKNAGFTFPSEDIGVVSGILALVLYNFIF DLKAYWAYKCVTKNIDFSWFKKKQNHKIELFLTQPLVAGFLSLIMLSAMSWGLYQLLPSL YALFLISLLGPLVIFLLFRMIRTSYVKQVAISVAKKVKYKSLTRYVLLSVCISTVVNLLT ISPLRNSDSFVTEGQWLTFKSIIALLILCGVVLAINLFFLRFSKRYAFLGRLFLQEIDLF FSSENALSTFFAKPLWLRLFILLVIEMMWITLVSVLATLVEWRIWFEAYFLLCYVPCLIY YFFHCRCLWHNDFMMACDMYFRWGHFNK >gi|299856445|gb|ADWV01000006.1| GENE 32 35833 - 36771 659 312 aa, chain + ## HITS:1 COG:ycdW KEGG:ns NR:ns ## COG: ycdW COG0111 # Protein_GI_number: 16128996 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli K12 # 1 312 14 325 325 640 100.0 0 MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAV FALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQ QNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAG REELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAAL DSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGE RVCGQVDRARGY >gi|299856445|gb|ADWV01000006.1| GENE 33 36826 - 37563 724 245 aa, chain + ## HITS:1 COG:ycdX KEGG:ns NR:ns ## COG: ycdX COG1387 # Protein_GI_number: 16128997 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Escherichia coli K12 # 1 245 1 245 245 477 99.0 1e-134 MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWP RVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHEPVFAPHDKATNTQAMIAT IASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNSSFLHSRKGSEDNCRAVAAAV RDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPERILNVSPRRLLNFLESRGMAPIA EFADL >gi|299856445|gb|ADWV01000006.1| GENE 34 37587 - 38141 738 184 aa, chain + ## HITS:1 COG:ECs1412 KEGG:ns NR:ns ## COG: ECs1412 COG3381 # Protein_GI_number: 15830666 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Escherichia coli O157:H7 # 1 184 1 184 184 345 99.0 3e-95 MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQDELLTRLQKSCDMAQV SADYNALFIGDECAVPPYRSAWVEDATEAEVRAFLSERGMPLADTPADHIGTLLLAASWL EDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFWRTMAPLTRDAISAMWDELEE DSEE >gi|299856445|gb|ADWV01000006.1| GENE 35 38213 - 38734 548 173 aa, chain + ## HITS:1 COG:no KEGG:SSON_1045 NR:ns ## KEGG: SSON_1045 # Name: ycdZ # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 173 7 179 179 281 100.0 1e-74 MAAFSAIMRGMNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGL AISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIG ACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSAKTAHREQEIKNKA >gi|299856445|gb|ADWV01000006.1| GENE 36 38798 - 39631 804 277 aa, chain - ## HITS:1 COG:ECs1414 KEGG:ns NR:ns ## COG: ECs1414 COG1462 # Protein_GI_number: 15830668 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in formation of curli polymers # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 548 99.0 1e-156 MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPAPSGKIFVSVYNIQDET GQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTV AINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVN VSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVI FLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES >gi|299856445|gb|ADWV01000006.1| GENE 37 39658 - 40044 347 128 aa, chain - ## HITS:1 COG:no KEGG:ECSP_1339 NR:ns ## KEGG: ECSP_1339 # Name: csgF # Def: curli assembly protein CsgF # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 128 11 138 138 205 100.0 4e-52 MLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDFGIETPSALDN FTQAIQSQILGGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKTGQTSTIQVSG LQNNSTDF >gi|299856445|gb|ADWV01000006.1| GENE 38 40099 - 40488 120 129 aa, chain - ## HITS:1 COG:no KEGG:APECO1_124 NR:ns ## KEGG: APECO1_124 # Name: csgE # Def: curli assembly protein CsgE # Organism: E.coli_APEC # Pathway: not_defined # 1 129 1 129 129 256 100.0 2e-67 MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS TGDLAHDEF >gi|299856445|gb|ADWV01000006.1| GENE 39 40493 - 41143 149 216 aa, chain - ## HITS:1 COG:ECs1417 KEGG:ns NR:ns ## COG: ECs1417 COG2771 # Protein_GI_number: 15830671 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 408 100.0 1e-114 MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYAMEDQERVVNG LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR >gi|299856445|gb|ADWV01000006.1| GENE 40 41870 - 42352 299 160 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_1421 NR:ns ## KEGG: ECH74115_1421 # Name: csgB # Def: curlin minor subunit # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 160 1 160 160 223 100.0 1e-57 MYDQVQGDNMKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFNQAAIIGQ AGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYGN TAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR >gi|299856445|gb|ADWV01000006.1| GENE 41 42393 - 42848 370 151 aa, chain + ## HITS:1 COG:no KEGG:B21_01046 NR:ns ## KEGG: B21_01046 # Name: csgA # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 151 1 151 151 187 100.0 1e-46 MKLLKVAAIAAIVFSGSALAGVVPQYGGGGNHGGGGNNSGPNSELNIYQYGGGNSALALQ TDARNSDLTITQHGGGNGADVGQGSDDSSIDLTQRGFGNSATLDQWNGKNSEMTVKQFGG GNGAAVDQTASNSSVNVTQVGFGNNATAHQY >gi|299856445|gb|ADWV01000006.1| GENE 42 42907 - 43239 210 110 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1055 NR:ns ## KEGG: ECS88_1055 # Name: csgC # Def: putative autoagglutination protein # Organism: E.coli_S88 # Pathway: not_defined # 1 110 54 163 163 158 98.0 4e-38 MNALLLLAALSSQITFNTTQQGDVYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEK TLSLPANQPIALTKLSLNISPEDRVKIVVTVSDGQSLHLSQQWPPSSEKS >gi|299856445|gb|ADWV01000006.1| GENE 43 43360 - 43671 244 103 aa, chain + ## HITS:1 COG:no KEGG:ECO103_1090 NR:ns ## KEGG: ECO103_1090 # Name: ymdA # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 103 1 103 103 195 100.0 4e-49 MFRPFLNSLMLGSLLFPFIAIAGSTAQGGVIHFYGQIVEPACDVSTQSSPVEMNCPQNGS VPGKTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEYN >gi|299856445|gb|ADWV01000006.1| GENE 44 43766 - 44077 179 103 aa, chain + ## HITS:1 COG:ECs1423 KEGG:ns NR:ns ## COG: ECs1423 COG2110 # Protein_GI_number: 15830677 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Escherichia coli O157:H7 # 1 97 1 97 177 184 96.0 3e-47 MKTCIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQGDC PTGHAVITLAGALPAKAVVHTVGPVWRGGEQNEDQLFAGCLSQ >gi|299856445|gb|ADWV01000006.1| GENE 45 44055 - 44300 125 81 aa, chain + ## HITS:1 COG:ECs1423 KEGG:ns NR:ns ## COG: ECs1423 COG2110 # Protein_GI_number: 15830677 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Escherichia coli O157:H7 # 1 81 97 177 177 161 98.0 2e-40 MQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYF VCYDEENAHLYERLLTQQGDE >gi|299856445|gb|ADWV01000006.1| GENE 46 44302 - 45723 900 473 aa, chain + ## HITS:1 COG:ymdC KEGG:ns NR:ns ## COG: ymdC COG1502 # Protein_GI_number: 16129009 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Escherichia coli K12 # 1 473 21 493 493 948 99.0 0 MPRLASAVLPLCSQHPGQCGLFPLEKSLDAFAARYRLAEMAEHTLDVQYYIWQDDMSGRL LFSALLAAAKRGVRVRLLLDDNNTPGLDDILRLLDSHPRIEVRLFNPFSFRLLRPLGYIT DFSRLNRRMHNKSFTVDGVVTLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVEDVADDF ARYWYCKSVSPLQQVLDVPEGEMADRIELPASWHNDAMTHRYLRKMESSPFINHLVDGTL PLIWAKTRLLSDDPAKGEGKAKRHSLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLL RMVRKGVKIAILTNSLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREQSSTLHDRGI TGNSGASLHAKTFSIDGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQY DAAWQLRLDRWGRINWVDRHAKKEIILKKEPATSFWKRVMVRLASILPVEWLL >gi|299856445|gb|ADWV01000006.1| GENE 47 45731 - 46888 656 385 aa, chain - ## HITS:1 COG:no KEGG:SSON_1060 NR:ns ## KEGG: SSON_1060 # Name: mdoC # Def: glucans biosynthesis protein # Organism: S.sonnei # Pathway: not_defined # 1 385 1 385 385 705 100.0 0 MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEPSLWLTLFNDFIHSFRM QVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLLTLPQFIMLQYVKGKAESW PGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRIRNNLENSDKTNKKFSMVKLS VIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTLFYLPFFILGALAFIFPHLKALF TTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETESVITMVLGLWMVNVVFSFGHRLLNF QSARVTYFVNASLFIYLVHHPLTLFFGAYITPHITSNWLGFLCGLIFVVGIAIILYEIHL RIPLLKFLFSGKPVVKRENDKAPAR >gi|299856445|gb|ADWV01000006.1| GENE 48 47264 - 48817 1598 517 aa, chain + ## HITS:1 COG:ECs1426 KEGG:ns NR:ns ## COG: ECs1426 COG3131 # Protein_GI_number: 15830680 # Func_class: P Inorganic ion transport and metabolism # Function: Periplasmic glucans biosynthesis protein # Organism: Escherichia coli O157:H7 # 7 517 1 511 511 1033 100.0 0 MKHKLQMMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYEAPKSNLPSVFRDM KYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATAVKRIKYSPDYFT FGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVIGAGQVYGLSARGLA IDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAYKFVVMPGRDTVVDVQS KIYLRDKVGKLGVAPLTSMFLFGPNQPSPANNYRPELHDSNGLSIHAGNGEWIWRPLNNP KHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPSAWVTPKGEWGKGSVELVEIP TNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDEDKLHAPDNAWVQQTRRSTGDVKQ SNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTSIGDNGEIVESTVRYNPVTKGWRLV MRVKVKDAKKTTEMRAALVNADQTLSETWSYQLPANE >gi|299856445|gb|ADWV01000006.1| GENE 49 48840 - 51353 2268 837 aa, chain + ## HITS:1 COG:ECs1427 KEGG:ns NR:ns ## COG: ECs1427 COG2943 # Protein_GI_number: 15830681 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane glycosyltransferase # Organism: Escherichia coli O157:H7 # 1 837 21 857 857 1678 100.0 0 MPIAASEKAALPKTDIRAVHQALDAEHRTWAREDDSPQGSVKARLEQAWPDSLADGQLIK DDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYLARLTKEEQESEQKW RTVGTIRRYILLILTLAQTVVATWYMKTILPYQGWALINPMDMVGQDLWVSFMQLLPYML QTGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNPEHRTALIMPI CNEDVNRVFAGLRATWESVKATGNAKHFDVYILSDSYNPDICVAEQKAWMELIAEVGGEG QIFYRRRRRRVKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAG IIQSSPKASGMDTLYARCQQFATRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHC ALAPLPGEGSFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRW CHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFL QPRQLFPVWPQWRPELAIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLE VLFSVLLAPVRMLFHTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWA VGMAWLDLRFLFWLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPEEYSPPQVLVD TDRFLEMNRQRSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETP EKLNRDRRLVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ >gi|299856445|gb|ADWV01000006.1| GENE 50 51526 - 51753 306 75 aa, chain + ## HITS:1 COG:ECs1428 KEGG:ns NR:ns ## COG: ECs1428 COG5645 # Protein_GI_number: 15830682 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 147 100.0 3e-36 MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDSAWRYVTILDLPFSLVF DTLLLPIDIHHGPYE >gi|299856445|gb|ADWV01000006.1| GENE 51 51754 - 52128 489 124 aa, chain - ## HITS:1 COG:no KEGG:G2583_1310 NR:ns ## KEGG: G2583_1310 # Name: msyB # Def: acidic protein MsyB # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 124 2 125 125 183 100.0 1e-45 MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQDGDIMWQVEFFADEGEE GECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRAAADE WDER >gi|299856445|gb|ADWV01000006.1| GENE 52 52211 - 53437 752 408 aa, chain - ## HITS:1 COG:yceE KEGG:ns NR:ns ## COG: yceE COG0477 # Protein_GI_number: 16129016 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 408 1 408 408 715 100.0 0 MSPCENDTPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGIVF SITFLFSAIASPFWGGLADRKGRKLMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLL GGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITAS VLILCFFVTLFCIREKFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAP ILTLYVRELAGNVSNVAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVL LLIPMSYVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGN VTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRRRIPQVSN >gi|299856445|gb|ADWV01000006.1| GENE 53 53609 - 54529 905 306 aa, chain - ## HITS:1 COG:ECs1432 KEGG:ns NR:ns ## COG: ECs1432 COG1560 # Protein_GI_number: 15830686 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 618 100.0 1e-177 MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGLGKLALRFMKRRAKIVH RNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDRRIARWTEVIGMEHIRDVQ AQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPLIDWLQTWGRLRSNKSMLDRK DLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTWMLARMSGACLVPFV PRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKVVEKCIMMAPEQYMWLHRRFKTRPE GVPSRY >gi|299856445|gb|ADWV01000006.1| GENE 54 54754 - 55806 798 350 aa, chain + ## HITS:1 COG:yceA KEGG:ns NR:ns ## COG: yceA COG1054 # Protein_GI_number: 16129018 # Func_class: R General function prediction only # Function: Predicted sulfurtransferase # Organism: Escherichia coli K12 # 1 350 1 350 350 737 99.0 0 MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDALYQLFTALNVFGRVYL AHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVAD GIDDPHFDASNVGEYLQAAEVNAMLDDPDVLFIDMRNHYEYEVGHFENALEIPADTFREQ LPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGL PVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYK GCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLGIPDPTE >gi|299856445|gb|ADWV01000006.1| GENE 55 55848 - 56423 595 191 aa, chain - ## HITS:1 COG:ECs1434 KEGG:ns NR:ns ## COG: ECs1434 COG2353 # Protein_GI_number: 15830688 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 360 100.0 1e-99 MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFT FDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELD ITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVD LIISVEGVQQK >gi|299856445|gb|ADWV01000006.1| GENE 56 56427 - 56993 364 188 aa, chain - ## HITS:1 COG:ECs1435 KEGG:ns NR:ns ## COG: ECs1435 COG3038 # Protein_GI_number: 15830689 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 345 100.0 2e-95 MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLM MGLVIRVLWRVISPPPGPLPSYSPMTRLAAKAGHLALYLLLFAIGISGYLISTADGKPIS VFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRMLG KSSSDYGV >gi|299856445|gb|ADWV01000006.1| GENE 57 57254 - 57367 147 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF >gi|299856445|gb|ADWV01000006.1| GENE 58 57415 - 58533 856 372 aa, chain - ## HITS:1 COG:ECs1437 KEGG:ns NR:ns ## COG: ECs1437 COG0665 # Protein_GI_number: 15830691 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli O157:H7 # 1 372 1 372 372 780 99.0 0 MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKY VPLVLRAQTLWDELSRHNEDDPIFVRSGVINLGPADSAFLANVAHSAEQWQLNVEKLDAQ GIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDD GVTIETVDGEYQAKKAIVCAGTWVKDLLPELPVQPVRKVFAWYQADGRYSVKNKFPAFTG ELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERVPFAEVVSDGSEAFPFLRNVLPGIG CCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQDKKSD FDLTPFRLSRFQ >gi|299856445|gb|ADWV01000006.1| GENE 59 58648 - 58902 225 84 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_1439 NR:ns ## KEGG: ECH74115_1439 # Name: bssS # Def: biofilm formation regulatory protein BssS # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 84 2 85 85 167 100.0 8e-41 MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGTEVGQTLWLTTDVARQF ISILEAGIAKIESGDFPVNEYRRH >gi|299856445|gb|ADWV01000006.1| GENE 60 59192 - 59437 216 81 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C1186 NR:ns ## KEGG: UTI89_C1186 # Name: not_defined # Def: DNA damage-inducible protein I # Organism: E.coli_UTI89 # Pathway: not_defined # 1 81 20 100 100 156 100.0 2e-37 MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDK QRISEILQETWESADDWFVSE >gi|299856445|gb|ADWV01000006.1| GENE 61 59511 - 60431 753 306 aa, chain - ## HITS:1 COG:pyrC KEGG:ns NR:ns ## COG: pyrC COG0418 # Protein_GI_number: 16129025 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase # Organism: Escherichia coli K12 # 1 306 43 348 348 628 99.0 1e-180 MPNLAPPVTTVEAAVAYRQRILDAVPAGHNFTPLMTCYLTDSLDPNELERGFNEGVFTAA KLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVM EPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRPHLYC LPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYATV FEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLVPFLAGETV RWSVKQ >gi|299856445|gb|ADWV01000006.1| GENE 62 60663 - 61223 643 186 aa, chain - ## HITS:1 COG:no KEGG:APECO1_145 NR:ns ## KEGG: APECO1_145 # Name: yceB # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 186 20 205 205 353 100.0 2e-96 MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSKDIGLPGVADAHIVLTN LTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALPVFDKEKGAIFLKEMEVVD ATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGSQGEAMAKKLAKGIEVKPGEI VIPFTD >gi|299856445|gb|ADWV01000006.1| GENE 63 61357 - 62004 689 215 aa, chain - ## HITS:1 COG:ECs1442 KEGG:ns NR:ns ## COG: ECs1442 COG2999 # Protein_GI_number: 15830696 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin 2 # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 427 100.0 1e-120 MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVGQKQVPILQKDDSRYMP ESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLLPRFAKSAFDEFSTPAARK YFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVKPNAVNGELSEDDIQLFPLLR NLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI >gi|299856445|gb|ADWV01000006.1| GENE 64 62068 - 63276 1231 402 aa, chain - ## HITS:1 COG:yceL KEGG:ns NR:ns ## COG: yceL COG0477 # Protein_GI_number: 16129028 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 402 11 412 412 701 100.0 0 MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWAAVMVGIALGLRQFIQQ GLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLLWFSCLLSGLGGTLFDPPR SALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLCAAF NAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLAGYYMLAVQVMLMLPIMVNDVAG APSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHRLMAGLLIMSLSMMPVGMVSGLQQL FTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLAIGGAIGYIGGGWLFDLG KSAHQPELPWMMLGIIGIFTFLALGWQFSQKRAARRLLERDA >gi|299856445|gb|ADWV01000006.1| GENE 65 63512 - 64096 1067 194 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15801183|ref|NP_287200.1| ribosomal-protein-S5-alanine N-acetyltransferase [Escherichia coli O157:H7 EDL933] # 1 194 1 194 194 415 100 1e-115 MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQ ARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSFHACYLGYSIGQKWQGKGL MFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLLIDGQWRDH VLTALTTPDWTPGR >gi|299856445|gb|ADWV01000006.1| GENE 66 64107 - 64754 851 215 aa, chain + ## HITS:1 COG:ECs1445 KEGG:ns NR:ns ## COG: ECs1445 COG3132 # Protein_GI_number: 15830699 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 395 99.0 1e-110 MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLD NLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSR AARMYEFSDMAEVELTLEQLANREDGPFVVRLAREPGKRESRYMHLFSGEVEDQPAVTDM SNAVDGDLQARVEALEIEVAELKQRLDSLLVHLGD >gi|299856445|gb|ADWV01000006.1| GENE 67 64756 - 65679 736 307 aa, chain + ## HITS:1 COG:mviM KEGG:ns NR:ns ## COG: mviM COG0673 # Protein_GI_number: 16129031 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 307 1 307 307 620 99.0 1e-178 MKKLRIGVVGLGGIAQKAWLPVLAAASDWMLQGAWSPTRAKALPICESWRIPYADSLSSL AASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVG FNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFTLLDDYLHVVDTALWLSGGKA SLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAGSQRETVQAVTDGALIDITDMRE WREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIECVQNQTVPQTAGEQAVLAQRIVDKI WRDAMSE >gi|299856445|gb|ADWV01000006.1| GENE 68 65789 - 67324 1013 511 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 [Haemophilus influenzae 22.1-21] # 3 502 5 516 524 394 40 1e-108 MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVAFKLPNLLRRIFAEGAF SQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADT ADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNISMIGFALFAAP YFNPPVLALAWAVTVGGILQLVYQLPHLKKIGMLVLPRINFHDAGAMRVVKQMGPAILGV SVSQISLIINTIFASFLASGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKSFASGNH DEYNRLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGKFTAFDALMTQRALIAYSVG LIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLILTQLMNLAFIGPLKHAGLSLSIGLAACL NASLLYWQLRKQKIFTPQPGWMAFLLRLVVAVLVMSGVLLGMLHIMPEWSLGTMPWRLLR LMAVVLAGIAAYFAALAVLGFKVKEFARRTV >gi|299856445|gb|ADWV01000006.1| GENE 69 67364 - 67780 449 138 aa, chain - ## HITS:1 COG:flgN KEGG:ns NR:ns ## COG: flgN COG3418 # Protein_GI_number: 16129033 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar biosynthesis/type III secretory pathway chaperone # Organism: Escherichia coli K12 # 1 138 1 138 138 208 99.0 3e-54 MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLLATLDYLEQLR KKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIERNQQALEMLKPHQEPTLY GANGQTSTTHRGGKKISI >gi|299856445|gb|ADWV01000006.1| GENE 70 67785 - 68078 347 97 aa, chain - ## HITS:1 COG:flgM KEGG:ns NR:ns ## COG: flgM COG2747 # Protein_GI_number: 16129034 # Func_class: K Transcription; N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Negative regulator of flagellin synthesis (anti-sigma28 factor) # Organism: Escherichia coli K12 # 1 97 1 97 97 123 100.0 8e-29 MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLSDAQAKLMQPGSSDINL ERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN >gi|299856445|gb|ADWV01000006.1| GENE 71 68154 - 68792 326 212 aa, chain - ## HITS:1 COG:flgA KEGG:ns NR:ns ## COG: flgA COG1261 # Protein_GI_number: 16129035 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar basal body P-ring biosynthesis protein # Organism: Escherichia coli K12 # 1 212 8 219 219 364 99.0 1e-101 MAIIAILFSPLSTASNLTSQLHNFFSAQLAGVSDEVRVSIRTAPNLLPPCEQPLLSMSNN SRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAMPIVRGGKLEAGNVKLKRGRLDTLPP RTVLDINQLVDAISLRDLSPDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALN NAAVAQNARVRMVSGQVVSGVVDADGNILINL >gi|299856445|gb|ADWV01000006.1| GENE 72 68968 - 69384 476 138 aa, chain + ## HITS:1 COG:flgB KEGG:ns NR:ns ## COG: flgB COG1815 # Protein_GI_number: 16129036 # Func_class: N Cell motility # Function: Flagellar basal body protein # Organism: Escherichia coli K12 # 1 138 1 138 138 228 100.0 2e-60 MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDAT SVVALTMTSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSL SALSGQIKGMMNVLQSGN >gi|299856445|gb|ADWV01000006.1| GENE 73 69388 - 69792 318 134 aa, chain + ## HITS:1 COG:ECs1452 KEGG:ns NR:ns ## COG: ECs1452 COG1558 # Protein_GI_number: 15830706 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Escherichia coli O157:H7 # 1 134 1 134 134 223 100.0 8e-59 MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATG GVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLN TVKSMMLKTLTLGQ >gi|299856445|gb|ADWV01000006.1| GENE 74 69804 - 70499 834 231 aa, chain + ## HITS:1 COG:ECs1453 KEGG:ns NR:ns ## COG: ECs1453 COG1843 # Protein_GI_number: 15830707 # Func_class: N Cell motility # Function: Flagellar hook capping protein # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 312 99.0 3e-85 MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQ LAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTT TTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYN VAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII >gi|299856445|gb|ADWV01000006.1| GENE 75 70524 - 71729 1309 401 aa, chain + ## HITS:1 COG:ECs1454 KEGG:ns NR:ns ## COG: ECs1454 COG1749 # Protein_GI_number: 15830708 # Func_class: N Cell motility # Function: Flagellar hook protein FlgE # Organism: Escherichia coli O157:H7 # 1 401 1 401 401 620 98.0 1e-177 MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQD FTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYP ATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNK KGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPTGTAEPAMKLVFNANGVLTSNP TENITTGAINGADPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVG NYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALE ASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR >gi|299856445|gb|ADWV01000006.1| GENE 76 71749 - 72504 663 251 aa, chain + ## HITS:1 COG:flgF KEGG:ns NR:ns ## COG: flgF COG4787 # Protein_GI_number: 16129040 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Escherichia coli K12 # 1 251 1 251 251 416 98.0 1e-116 MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTAS TPGADMTPGKMDYTSRPLDVALQQDGWLAVQSADGSEGYTRNGSIQVDPTGQLTIQGHPV IGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFR LSAESQATRGPILQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDN AGRANQLLSMS >gi|299856445|gb|ADWV01000006.1| GENE 77 72642 - 73424 996 260 aa, chain + ## HITS:1 COG:ECs1456 KEGG:ns NR:ns ## COG: ECs1456 COG4786 # Protein_GI_number: 15830710 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Escherichia coli O157:H7 # 1 260 1 260 260 434 100.0 1e-122 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQT TLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY EINSKAVSTTDQMLQKLTQL >gi|299856445|gb|ADWV01000006.1| GENE 78 73477 - 74175 765 232 aa, chain + ## HITS:1 COG:ECs1457 KEGG:ns NR:ns ## COG: ECs1457 COG2063 # Protein_GI_number: 15830711 # Func_class: N Cell motility # Function: Flagellar basal body L-ring protein # Organism: Escherichia coli O157:H7 # 1 232 1 232 232 411 99.0 1e-115 MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVANGSIFQSAQPINY GYQPLFEDRRPRNIGDTLTIVLQENVSASKSSYANASRDGKTNFGFDTVPRYLQGLFGNA RADVEASGGNTFNGKGGANASNTFNGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRF SGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM >gi|299856445|gb|ADWV01000006.1| GENE 79 74187 - 75284 941 365 aa, chain + ## HITS:1 COG:flgI KEGG:ns NR:ns ## COG: flgI COG1706 # Protein_GI_number: 16129043 # Func_class: N Cell motility # Function: Flagellar basal-body P-ring protein # Organism: Escherichia coli K12 # 1 365 1 365 365 556 100.0 1e-158 MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVGLDGTGDQTTQTPFTTQ TLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQTIDVVVSSMGNAKSLRGGT LLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQLNGGRITNGAVIERELPSQFG VGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVRFLADIQ NMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQANVSQPDTPFGGG QTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQSAGCLRA KLEII >gi|299856445|gb|ADWV01000006.1| GENE 80 75284 - 76225 988 313 aa, chain + ## HITS:1 COG:flgJ_1 KEGG:ns NR:ns ## COG: flgJ_1 COG3951 # Protein_GI_number: 16129044 # Func_class: M Cell wall/membrane/envelope biogenesis; N Cell motility; O Posttranslational modification, protein turnover, chaperones # Function: Rod binding protein # Organism: Escherichia coli K12 # 1 167 1 167 167 289 99.0 4e-78 MISDSKLLASAAWDAQSLNELKAKAGEDPAANIRPVARQVEGMFVQMMLKSMRDALPKDG LFSSEHTRLYTSMYDQQIAQQMTAGKGLGLAEMMVKQMTPEQPLPEEPTPAAPMKFPLET VVRYQNQALSQLVQKAVPRNYDDSLPGDSKAFLAQLSLPAQLASQQSGVPHHLILAQAAL ESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITTTEYENGEAKKVKAKFRVYSSYL EALSDYVGLLTRNPRYAAVTTAASAEQGAQALQDAGYATDPHYARKLTNMIQQMKSISDK VSKTYSMNIDNLF >gi|299856445|gb|ADWV01000006.1| GENE 81 76291 - 77934 1481 547 aa, chain + ## HITS:1 COG:flgK KEGG:ns NR:ns ## COG: flgK COG1256 # Protein_GI_number: 16129045 # Func_class: N Cell motility # Function: Flagellar hook-associated protein # Organism: Escherichia coli K12 # 1 547 1 547 547 878 99.0 0 MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVNV SGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTL VSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVDQINNYAKQIASLN DQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGST ARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQ LALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPAILQNTKNKGDVAIGATVTDASGVLAT DYKISFDNNQWQVTRLASNTTFTVTPDANGKVAFDGLELTFTGTPAVNDSFTLKPVSDAI VNMDVLITDEAKIAMASEEDAGDSDNRNGQALLDLQSNSKTVGGAKSFNDAYASLVSDIG NKTATLKTSSTTQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIF DALINIR >gi|299856445|gb|ADWV01000006.1| GENE 82 77946 - 78899 864 317 aa, chain + ## HITS:1 COG:flgL KEGG:ns NR:ns ## COG: flgL COG1344 # Protein_GI_number: 16129046 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Escherichia coli K12 # 1 317 1 317 317 514 99.0 1e-145 MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNS QYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQ LLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIRQQVDASRSMVIGHTGDKIF DSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKEIAAAALDKTNRGLKNSL NNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQAS YKAFTDMQGLSLFQLNK >gi|299856445|gb|ADWV01000006.1| GENE 83 79096 - 82281 3345 1061 aa, chain - ## HITS:1 COG:ECs1462 KEGG:ns NR:ns ## COG: ECs1462 COG1530 # Protein_GI_number: 15830716 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Escherichia coli O157:H7 # 1 1061 1 1061 1061 1483 99.0 0 MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY GAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEAL QWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS LSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQME TPHYHVLRVRKGEETPTLSYMLPKLHEEAMALPSEEEFAERKRPEQPALATFAMPDVPPA PTPAEPAAPVVAPAPKAAPATPATPAQPGLLSRFFGALKALFSGSEETKPTEQPAPKAEA KPERQQDRRKPRQNNRRDRNERRDTRSERTEGSDNREENRRNRRQAQQQTAETRESRQQA EVTEKARTTDEQQAPRRERSRRRNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRR KQRQLNQKVRYEQSVAEEAVVAPVVEETAAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQ QEENNADNRDNGGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASG KVWIRYPIVRPQDVQVEEQREQEEVQVQPMVTEVPVAAAVEPVVSAPVVEEMAEVVEAPV PVAEPQPEVVETTHPEVIAAAVTEQPQVITESDVAVAQEVAEHAEPVVEPQEETADIEEV AETAEVVVAEPEVVAQPAAPVVAEVAAEVETVAAVEPEITVEHNHATAPMTRAPAPEYVP EAPRHSDWQRPTFAFEGKGAAGGHTATHHASAAPARPQPVE >gi|299856445|gb|ADWV01000006.1| GENE 84 82854 - 83813 190 319 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 95 309 83 284 285 77 29 3e-13 MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKL EAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLS FGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALV RGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGR THQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRI EAPMDEGLKRCLQKLRNAR >gi|299856445|gb|ADWV01000006.1| GENE 85 83925 - 84548 475 207 aa, chain - ## HITS:1 COG:yceF KEGG:ns NR:ns ## COG: yceF COG0424 # Protein_GI_number: 16129050 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Escherichia coli K12 # 1 207 1 207 207 418 100.0 1e-117 MAIINTLYLMEKNMPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLR LAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLA LFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGR DPNTLVGLPLIALCQMLRREGKNPLMG >gi|299856445|gb|ADWV01000006.1| GENE 86 84708 - 85229 440 173 aa, chain + ## HITS:1 COG:ECs1466 KEGG:ns NR:ns ## COG: ECs1466 COG1399 # Protein_GI_number: 15830720 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Escherichia coli O157:H7 # 1 173 1 173 173 320 100.0 7e-88 MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSDVECSMSFAIDNQRLAV LNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLL AMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEAQKPNPFAVLASLKRK >gi|299856445|gb|ADWV01000006.1| GENE 87 85281 - 85454 292 57 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15801206|ref|NP_287223.1| 50S ribosomal protein L32 [Escherichia coli O157:H7 EDL933] # 1 57 1 57 57 117 100 5e-25 MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK >gi|299856445|gb|ADWV01000006.1| GENE 88 85565 - 86605 681 346 aa, chain + ## HITS:1 COG:ZplsX KEGG:ns NR:ns ## COG: ZplsX COG0416 # Protein_GI_number: 15801207 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Escherichia coli O157:H7 EDL933 # 1 346 1 346 346 631 99.0 0 MGGDFGPSVTVPAALQALNSNSQLTLLLVGNPDAITPLLAKADFEQRSRLQIIPAQSVIA SDARPSQAIRASRGSSMRMALELVKEGRAQACVSAGNTGALMGLAKLLLKPLEGIERPAL VTVLPHQQKGKTVVLDLGANVDCDSTMLVQFAIMGSVLAEEVVEIPNPRVALLNIGEEEV KGLDSIRDASAVLKTIPSINYIGYLEANELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFL SLLKSQGEGKKRSWWLLLLKRWLQKSLTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQ RAFAVAIEQAVQAVQRQVPQRIAARLESVYPAGFELLDGGKSGTLR >gi|299856445|gb|ADWV01000006.1| GENE 89 86673 - 87626 931 317 aa, chain + ## HITS:1 COG:ECs1469 KEGG:ns NR:ns ## COG: ECs1469 COG0332 # Protein_GI_number: 15830723 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 612 100.0 1e-175 MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAAT RAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALS VADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEPGIISTHLH ADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDW LVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVL LEAFGGGFTWGSALVRF >gi|299856445|gb|ADWV01000006.1| GENE 90 87642 - 88571 1016 309 aa, chain + ## HITS:1 COG:fabD KEGG:ns NR:ns ## COG: fabD COG0331 # Protein_GI_number: 16129055 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Escherichia coli K12 # 1 309 1 309 309 532 100.0 1e-151 MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTW QTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKF MQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAG AACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCETNG DAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEP SAMAAALEL >gi|299856445|gb|ADWV01000006.1| GENE 91 88584 - 89318 252 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 243 4 242 242 101 29 2e-20 MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNV TDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKA VMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA PGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGG MYMV >gi|299856445|gb|ADWV01000006.1| GENE 92 89529 - 89765 395 78 aa, chain + ## HITS:1 COG:ECs1472 KEGG:ns NR:ns ## COG: ECs1472 COG0236 # Protein_GI_number: 15830726 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Escherichia coli O157:H7 # 1 78 1 78 78 108 100.0 2e-24 MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEA EKITTVQAAIDYINGHQA >gi|299856445|gb|ADWV01000006.1| GENE 93 89853 - 91094 1280 413 aa, chain + ## HITS:1 COG:ECs1473 KEGG:ns NR:ns ## COG: ECs1473 COG0304 # Protein_GI_number: 15830727 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli O157:H7 # 1 413 1 413 413 729 100.0 0 MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCE DIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHT SLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAY GDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLV LEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGY VNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRD QAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKI >gi|299856445|gb|ADWV01000006.1| GENE 94 91214 - 92023 524 269 aa, chain + ## HITS:1 COG:ECs1474 KEGG:ns NR:ns ## COG: ECs1474 COG0115 # Protein_GI_number: 15830728 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 540 98.0 1e-153 MFLINGYKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMIFCDFW PQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATRILSVTVYPAHYDRLRNEG MTLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNADEALVLDSEGWVTECCAANLF WRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEEALQADEMVICNALMP VMPVRACGDVSFSSATLYEYLAPLCERPN >gi|299856445|gb|ADWV01000006.1| GENE 95 92026 - 93048 1149 340 aa, chain + ## HITS:1 COG:yceG KEGG:ns NR:ns ## COG: yceG COG1559 # Protein_GI_number: 16129060 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Escherichia coli K12 # 1 340 1 340 340 652 99.0 0 MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKPGTGRLALGEQLYAD KIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRL SDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGWFWPDTWMYTANTTDVALLKR AHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGM RLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAK TPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVLKEKNAQ >gi|299856445|gb|ADWV01000006.1| GENE 96 93038 - 93679 797 213 aa, chain + ## HITS:1 COG:tmk KEGG:ns NR:ns ## COG: tmk COG0125 # Protein_GI_number: 16129061 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Escherichia coli K12 # 1 213 1 213 213 399 100.0 1e-111 MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSV GDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHML ATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRARYLELAAQ DKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA >gi|299856445|gb|ADWV01000006.1| GENE 97 93676 - 94680 726 334 aa, chain + ## HITS:1 COG:ECs1477 KEGG:ns NR:ns ## COG: ECs1477 COG0470 # Protein_GI_number: 15830731 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 606 99.0 1e-173 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG HCRGCQLMQAGTHPDYYTLAPEKGKNALGIDAVREVTEKLNEHARLGGAKVVWVTDAALL TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQ APARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQL MSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL >gi|299856445|gb|ADWV01000006.1| GENE 98 94691 - 95488 749 265 aa, chain + ## HITS:1 COG:ECs1478 KEGG:ns NR:ns ## COG: ECs1478 COG0084 # Protein_GI_number: 15830732 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli O157:H7 # 1 265 1 265 265 528 100.0 1e-150 MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNV VFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIG RELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIV TFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVE ELAQVTTDNFARLFHIDASRLQSIR >gi|299856445|gb|ADWV01000006.1| GENE 99 95783 - 97216 1620 477 aa, chain + ## HITS:1 COG:ptsG_1 KEGG:ns NR:ns ## COG: ptsG_1 COG1263 # Protein_GI_number: 16129064 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 397 1 397 397 739 100.0 0 MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMP LIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIASKHLADTGVLG GIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQ TFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRY MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPI EFSFMFVAPILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIV GIGYAIVYYTIFRVLIKALDLKTPGREDATEDAKATGTSEMAPALVAAFGGKENITNLDA CITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNH >gi|299856445|gb|ADWV01000006.1| GENE 100 97276 - 99465 2104 729 aa, chain - ## HITS:1 COG:ECs1480 KEGG:ns NR:ns ## COG: ECs1480 COG4773 # Protein_GI_number: 15830734 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Escherichia coli O157:H7 # 1 729 1 729 729 1405 99.0 0 MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDY SVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTQGISKSQADSDRALY YSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAINM VRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS EKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDW AYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNY GPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWTNIF PDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELG LKSDWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAI TDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYT DTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGAPRN FSITGTYQF >gi|299856445|gb|ADWV01000006.1| GENE 101 99799 - 100158 474 119 aa, chain + ## HITS:1 COG:ECs1481 KEGG:ns NR:ns ## COG: ECs1481 COG0537 # Protein_GI_number: 15830735 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 205 100.0 2e-53 MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQ ALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAHKGL >gi|299856445|gb|ADWV01000006.1| GENE 102 100161 - 100538 191 125 aa, chain + ## HITS:1 COG:ECs1482 KEGG:ns NR:ns ## COG: ECs1482 COG5633 # Protein_GI_number: 15830736 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Escherichia coli O157:H7 # 1 125 1 125 125 226 100.0 1e-59 MRKGCFGLVSLALLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPVLSTSDIQPSA SSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVR LYLYL >gi|299856445|gb|ADWV01000006.1| GENE 103 100552 - 101193 562 213 aa, chain + ## HITS:1 COG:ECs1483 KEGG:ns NR:ns ## COG: ECs1483 COG3417 # Protein_GI_number: 15830737 # Func_class: R General function prediction only # Function: Collagen-binding surface adhesin SpaP (antigen I/II family) # Organism: Escherichia coli O157:H7 # 1 213 1 213 213 367 100.0 1e-102 MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPG PIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSVLLVDSVNNRTNGSLNAAE ATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGTRSKAIGIARNVGAHYVLYSS ASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ >gi|299856445|gb|ADWV01000006.1| GENE 104 101174 - 101998 290 274 aa, chain + ## HITS:1 COG:ycfN KEGG:ns NR:ns ## COG: ycfN COG0510 # Protein_GI_number: 16129069 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted choline kinase involved in LPS biosynthesis # Organism: Escherichia coli K12 # 1 274 1 274 274 522 99.0 1e-148 MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSA FLRQYRALSQLPASIAPKPHLYLRDWMVVDYLPGAVKTYLPDTNELAGLLYYLHQQPRFG WRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRPLRLSPLHMDVHAGNLVHSAS GLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLL MLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ >gi|299856445|gb|ADWV01000006.1| GENE 105 102009 - 103034 1110 341 aa, chain + ## HITS:1 COG:ycfO KEGG:ns NR:ns ## COG: ycfO COG1472 # Protein_GI_number: 16129070 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Escherichia coli K12 # 1 341 1 341 341 676 99.0 0 MGPVMLDVKGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRELVRQIRAASRNHLVVA VDQEGGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGWLMASEMIAMDIDISFAPV LDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETP CDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSDVDPRPASGSPYWLKTVLRQELG FDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPIKAERV TRLYHKGSFSRQELMDSARWKAISTRLNQLHERWQEEKAGH >gi|299856445|gb|ADWV01000006.1| GENE 106 103057 - 103599 526 180 aa, chain + ## HITS:1 COG:ECs1486 KEGG:ns NR:ns ## COG: ECs1486 COG3150 # Protein_GI_number: 15830740 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 180 20 199 199 375 100.0 1e-104 MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDE RPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKIDRPEEYADIATKCVTNFR EKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQTHKFKNISPHLQRIKAFKTLG >gi|299856445|gb|ADWV01000006.1| GENE 107 104008 - 105312 1349 434 aa, chain + ## HITS:1 COG:ndh KEGG:ns NR:ns ## COG: ndh COG1252 # Protein_GI_number: 16129072 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Escherichia coli K12 # 1 434 1 434 434 862 99.0 0 MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLD EGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDEKGELLVPERKIAYDTLVM ALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGVNGKVNIAIVGGGA TGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLG VRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGIKAPDFLKDIGGLETNRINQLVVEP TLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGKPLKNYQYK DHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRIARFVYISLYRMHQIALHGYFKTGLMMLV GSINRVIRPRLKLH >gi|299856445|gb|ADWV01000006.1| GENE 108 105539 - 106078 578 179 aa, chain + ## HITS:1 COG:ycfJ KEGG:ns NR:ns ## COG: ycfJ COG3134 # Protein_GI_number: 16129073 # Func_class: S Function unknown # Function: Predicted outer membrane lipoprotein # Organism: Escherichia coli K12 # 1 179 1 179 179 300 100.0 1e-81 MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVT HRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESD TYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRDPGTQIPLDSNGQLILNNKV >gi|299856445|gb|ADWV01000006.1| GENE 109 106140 - 106850 422 236 aa, chain - ## HITS:1 COG:ECs1489 KEGG:ns NR:ns ## COG: ECs1489 COG1309 # Protein_GI_number: 15830743 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 483 99.0 1e-137 MGSGLVNGGDYFYNNLSFTVTRYNGIMATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQ HGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVE SALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQ RQARGEIPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK >gi|299856445|gb|ADWV01000006.1| GENE 110 107013 - 107270 282 85 aa, chain + ## HITS:1 COG:no KEGG:ECO103_1157 NR:ns ## KEGG: ECO103_1157 # Name: ycfR # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 85 1 85 85 127 100.0 9e-29 MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAGTNLGSLEEQLAQKADE MGAKSFRITSVTGPNTLHGTAVIYK >gi|299856445|gb|ADWV01000006.1| GENE 111 107353 - 108312 885 319 aa, chain - ## HITS:1 COG:ECs1491 KEGG:ns NR:ns ## COG: ECs1491 COG1376 # Protein_GI_number: 15830745 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 319 2 320 320 596 99.0 1e-170 MIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAK KYNVGFLALLQANPGVDPYVPRADSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKN SVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPD NPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNII NTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMD VRSGMPVDVRRHQVSPQTL >gi|299856445|gb|ADWV01000006.1| GENE 112 108459 - 111905 3824 1148 aa, chain - ## HITS:1 COG:mfd KEGG:ns NR:ns ## COG: mfd COG1197 # Protein_GI_number: 16129077 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Escherichia coli K12 # 1 1148 1 1148 1148 2276 99.0 0 MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEIS QFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPH SFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPY RLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRD PEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTL ARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPD LAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASD RGRYLMIGAAEHGFVDKVRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHIG QPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENA PLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFE TTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTL LAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKF KDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPP ARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAI GHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR GRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLG EEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDV NTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARILLDVARLRQQAQKLGIRKLEG NEKGGVIEFAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMR ELEENAIA >gi|299856445|gb|ADWV01000006.1| GENE 113 112033 - 113106 1019 357 aa, chain - ## HITS:1 COG:ycfT KEGG:ns NR:ns ## COG: ycfT COG4763 # Protein_GI_number: 16129078 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 357 1 357 357 623 99.0 1e-178 MKQKELWINQIKGLCICLVVIYHSVITFYPHLTTFQHPLSEVLSKCWIYFNLYLAPFRMP VFFFISGYLIRRYIDSVPWGNCLDIRIWNIFWVLALWGVVQWLALSALNQWLAPERDLSN ASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIFSRLALPLFALFVLLSVAVNF VPTPWWGMNSVIRNLLYYSLGAWFGATIMTCVKEVPLRRHLLMASLLTVLAVGAWLFTIS LLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMN AARWSPQVELTLLLVYPFVSLFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR >gi|299856445|gb|ADWV01000006.1| GENE 114 113368 - 114567 1425 399 aa, chain + ## HITS:1 COG:ECs1494 KEGG:ns NR:ns ## COG: ECs1494 COG4591 # Protein_GI_number: 15830748 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Escherichia coli O157:H7 # 1 399 1 399 399 703 100.0 0 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPA QKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPS QRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAIL QTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAI EPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE >gi|299856445|gb|ADWV01000006.1| GENE 115 114560 - 115261 226 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 6 216 9 210 309 91 29 2e-17 MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDT PTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPA EINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARN ADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE >gi|299856445|gb|ADWV01000006.1| GENE 116 115267 - 116505 1295 412 aa, chain + ## HITS:1 COG:lolE KEGG:ns NR:ns ## COG: lolE COG4591 # Protein_GI_number: 16129081 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Escherichia coli K12 # 1 412 3 414 414 758 99.0 0 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV VPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGVNLRAIQVKGVNPQQ EQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQP KRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAG EVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDI AVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLS SDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ >gi|299856445|gb|ADWV01000006.1| GENE 117 116534 - 117445 831 303 aa, chain + ## HITS:1 COG:ycfX KEGG:ns NR:ns ## COG: ycfX COG1940 # Protein_GI_number: 16129082 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Escherichia coli K12 # 1 303 1 303 303 625 100.0 1e-179 MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVCELVAEADQRFGCKGSV GIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFT QYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRLPVDALTMMGLDFPLRRCGCG QHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQGDEQARAHVERYLDLLAVCLGNI LTIVDPDLVVIGGGLSNFPAITTQLADRLPRHLLPVARVPRIERARHGDAGGMRGAAFLH LTD >gi|299856445|gb|ADWV01000006.1| GENE 118 117461 - 118282 623 273 aa, chain + ## HITS:1 COG:ycfY KEGG:ns NR:ns ## COG: ycfY COG0846 # Protein_GI_number: 16129083 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Escherichia coli K12 # 1 273 1 273 279 543 100.0 1e-154 MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVLVLTGAGISAESGIRTF RAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQPEIQPNAAHLALAKLQDAL GDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQVLDWTGDVTPEDKCHCCQFP APLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELN LEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGL >gi|299856445|gb|ADWV01000006.1| GENE 119 118421 - 119209 425 262 aa, chain - ## HITS:1 COG:no KEGG:ECO103_1166 NR:ns ## KEGG: ECO103_1166 # Name: ycfZ # Def: putative inner membrane protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 262 1 262 262 486 99.0 1e-136 MKKFIILLSLLILLPLVATSKPLIPIMKTLFTDVTGTVPDAEEIARKAELFRQQTGIAPF IVILPDINNEASLRQNGKAMLAHASSSLSNVKGSVLLLFTTREPRLIMITNGQVESGLDD KHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQPTPPLTYYPHPGQQHENAPPGS TNTLGFIAWAATFILFSWIFCYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRIT PLWAGLIGVCTFIAALLLTSKR >gi|299856445|gb|ADWV01000006.1| GENE 120 119206 - 119667 163 153 aa, chain - ## HITS:1 COG:no KEGG:ECO111_1399 NR:ns ## KEGG: ECO111_1399 # Name: yfmA # Def: putative inner membrane protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 153 1 153 153 303 99.0 2e-81 MSQDSKVLSRAFLGIGLILLVISAIIFYYHFTFTKSAVHTEGIIVDAVWYNNHSNDVDDN GSWYPVVAFRPTPDYTLIFNSNIGSDFYEDSEGDRVNVYYPPGHPEQAEINNPWVNFFKW GFVGIAGIIFGSVGLIITLPSTKKSRRKRKSRP >gi|299856445|gb|ADWV01000006.1| GENE 121 119725 - 120771 1478 348 aa, chain - ## HITS:1 COG:potD KEGG:ns NR:ns ## COG: potD COG0687 # Protein_GI_number: 16129086 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 348 1 348 348 652 100.0 0 MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYE SNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFD PNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKL GYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGSAFVARQAG TPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYPTPNLAA RKLLSPEVANDKTLYPDAETIKNGEWQNDVGAASSIYEEYYQKLKAGR >gi|299856445|gb|ADWV01000006.1| GENE 122 120768 - 121562 985 264 aa, chain - ## HITS:1 COG:ECs1500 KEGG:ns NR:ns ## COG: ECs1500 COG1177 # Protein_GI_number: 15830754 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Escherichia coli O157:H7 # 1 264 1 264 264 431 100.0 1e-121 MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAA QHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFM LLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPL AMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVL SLVMVIASQLIARDKTKGNTGDVK >gi|299856445|gb|ADWV01000006.1| GENE 123 121559 - 122386 964 275 aa, chain - ## HITS:1 COG:ECs1570 KEGG:ns NR:ns ## COG: ECs1570 COG1176 # Protein_GI_number: 15830824 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Escherichia coli O157:H7 # 1 271 11 281 287 444 99.0 1e-124 MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLLDPLYFEVLLHSLN MALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYL NEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGAS KLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDW PFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE >gi|299856445|gb|ADWV01000006.1| GENE 124 122400 - 123518 1281 372 aa, chain - ## HITS:1 COG:ECs1571 KEGG:ns NR:ns ## COG: ECs1571 COG3842 # Protein_GI_number: 15830825 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 372 7 378 378 730 99.0 0 MNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGL ETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP RVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQM QNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMREGRIEQDGTPREIYEEPKNLFVAG FIGEINMFNATVIERLDEQRVRANVEGRECNIYVNFAVEPGQKLHVLLRPEDLRVEEIND DNHAEGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMAINWVE SWEVVLADEEHK >gi|299856445|gb|ADWV01000006.1| GENE 125 123786 - 125012 1511 408 aa, chain + ## HITS:1 COG:ECs1572 KEGG:ns NR:ns ## COG: ECs1572 COG2195 # Protein_GI_number: 15830826 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Escherichia coli O157:H7 # 1 408 1 408 408 832 99.0 0 MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEEMGLINVTLSEKGTLMA TLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVESYRGGDIALGIGDEVLSPVMFPVL HQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKNIPHGDIRVAFTPDEEVGKGAK HFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIVGNNVHPGTAKGVMVNALSLAAR IHAEVPADESPEMTEGYEGFYHLASMKGTVDRADMHYIIRDFDRKQFEARKRKMMEIAKK VGKGLHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMRDCDIEPELKPIRGGTDGAQ LSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIAELTAQRK >gi|299856445|gb|ADWV01000006.1| GENE 126 125061 - 126182 1221 373 aa, chain - ## HITS:1 COG:ECs1573 KEGG:ns NR:ns ## COG: ECs1573 COG2850 # Protein_GI_number: 15830827 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 373 4 376 376 749 99.0 0 MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGK WQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGG GVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILY IPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRAHPA DVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQG DVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAML AALVNSGYWFFEG >gi|299856445|gb|ADWV01000006.1| GENE 127 126258 - 127718 1268 486 aa, chain - ## HITS:1 COG:phoQ KEGG:ns NR:ns ## COG: phoQ COG0642 # Protein_GI_number: 16129092 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 486 1 486 486 955 99.0 0 MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFRLLRGESNLFY TLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFH EIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVAVNVYPATSRMPKLTFVVVDT IPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLN PATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSV SDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSALNKVYQRKGV NISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDGPGI PLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQH SAPKDE >gi|299856445|gb|ADWV01000006.1| GENE 128 127718 - 128389 816 223 aa, chain - ## HITS:1 COG:ECs1602 KEGG:ns NR:ns ## COG: ECs1602 COG0745 # Protein_GI_number: 15830856 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 223 1 223 223 416 99.0 1e-116 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHLPDIAIVDLGLPDEDGL SLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNS GLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYP DAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGYLFELR >gi|299856445|gb|ADWV01000006.1| GENE 129 128557 - 129927 1713 456 aa, chain - ## HITS:1 COG:ECs1603 KEGG:ns NR:ns ## COG: ECs1603 COG0015 # Protein_GI_number: 15830857 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Escherichia coli O157:H7 # 1 456 1 456 456 931 100.0 0 MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFA ADAIGYLDAIVANFSEEDAARIKTIERTTNHDVKAVEYFLKEKVAEIPELHAVSEFIHFA CTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQYRDIPLLSRTHGQPATPSTI GKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQ WNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYIALNHFKQKTIAGEIGSSTMPH KVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQST LKGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRYGIEKPYEKLKELTRGKRVDAEGMK QFIDGLALPEEEKARLKAMTPANYIGRAITMVDELK >gi|299856445|gb|ADWV01000006.1| GENE 130 129931 - 130572 736 213 aa, chain - ## HITS:1 COG:ycfC KEGG:ns NR:ns ## COG: ycfC COG2915 # Protein_GI_number: 16129095 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in purine metabolism # Organism: Escherichia coli K12 # 1 213 1 213 213 380 100.0 1e-105 MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSIIDMNPSSTLAVFGGSEA NLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSAKGALDTLGNRINGLQRQL EHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQSPQVQAKVRATLLAGIRAAVL WHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL >gi|299856445|gb|ADWV01000006.1| GENE 131 130608 - 131714 1395 368 aa, chain - ## HITS:1 COG:trmU KEGG:ns NR:ns ## COG: trmU COG0482 # Protein_GI_number: 16129096 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Escherichia coli K12 # 1 368 16 383 383 748 100.0 0 MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQA VCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLG ADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRK IAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTL GQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPF TGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII EQRLPLPV >gi|299856445|gb|ADWV01000006.1| GENE 132 131768 - 132229 414 153 aa, chain - ## HITS:1 COG:ECs1606 KEGG:ns NR:ns ## COG: ECs1606 COG0494 # Protein_GI_number: 15830860 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 313 99.0 6e-86 MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISA QPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILKASNLRS PLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI >gi|299856445|gb|ADWV01000006.1| GENE 133 132239 - 132862 449 207 aa, chain - ## HITS:1 COG:ymfC KEGG:ns NR:ns ## COG: ymfC COG1187 # Protein_GI_number: 16129098 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli K12 # 1 207 1 207 207 400 100.0 1e-112 MQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPVQ GVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVT LNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFP TLRLIRYAMGDYSLDNLANGEWREVTD >gi|299856445|gb|ADWV01000006.1| GENE 134 133064 - 134314 1556 416 aa, chain + ## HITS:1 COG:ECs1608 KEGG:ns NR:ns ## COG: ECs1608 COG0538 # Protein_GI_number: 15830862 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 416 1 416 416 842 99.0 0 MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPAMLKVVDAAVEKAYKGE RKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQ ELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLR EEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAIANDRDSVTLVHKGNIMKFTEGA FKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIVIKDVIADAFLQQILLRPAEYDVIA CMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSA EMMLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMEGAKLLKCSEFGDAIIKNM >gi|299856445|gb|ADWV01000006.1| GENE 135 135436 - 135840 111 134 aa, chain - ## HITS:1 COG:ycgX KEGG:ns NR:ns ## COG: ycgX COG5562 # Protein_GI_number: 16129124 # Func_class: R General function prediction only # Function: Phage envelope protein # Organism: Escherichia coli K12 # 1 134 1 134 134 265 100.0 1e-71 MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTR NLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNT LLYIEDVENNKPLI >gi|299856445|gb|ADWV01000006.1| GENE 136 136061 - 136792 402 243 aa, chain - ## HITS:1 COG:ycgE KEGG:ns NR:ns ## COG: ycgE COG0789 # Protein_GI_number: 16129125 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 243 1 243 243 475 100.0 1e-134 MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRIEEIKRWISNG VPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRARIISLGREYPVDQLINHV YLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRKPGKEAILMAWNVEERARLWL EAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGMAPTRRQNELLQHWGEQGYKVIF HAP >gi|299856445|gb|ADWV01000006.1| GENE 137 136997 - 138208 464 403 aa, chain - ## HITS:1 COG:ycgF_2 KEGG:ns NR:ns ## COG: ycgF_2 COG2200 # Protein_GI_number: 16129126 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 161 403 1 243 243 477 98.0 1e-134 MLTTLIYRSHIRDDEPVKKTEEMVSIANRRNMQSDVTGILLFNGSHFFQLLEGPEEQVKM IYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHERDDVLQAVFDKGTSKFQLT YDDRALQFFRTFVLATEQSTYFEIPAEDSWLFIADGSDKELDSCTLSPTINDHFAFHPIV DPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFAMAHALELGDKMIS INLLPMTLVNEPDAVSFLLDEIKANALVPEQIIVEFTESEVISRFDEFAEAIKSLKAAGI SVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAIIKCCTSLEIQVS AMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK >gi|299856445|gb|ADWV01000006.1| GENE 138 138522 - 138758 205 78 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1225 NR:ns ## KEGG: ECS88_1225 # Name: ycgZ # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 78 1 78 78 143 100.0 2e-33 MHQNSVTSDSAGAITRYFAKANLPTQQETLGEIVTEILKDGRNLSRKSLCAKLLCRLEQA TGEEEQKHYNALIGLLFE >gi|299856445|gb|ADWV01000006.1| GENE 139 139102 - 139368 263 88 aa, chain + ## HITS:1 COG:no KEGG:B21_01149 NR:ns ## KEGG: B21_01149 # Name: ymgB # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 88 1 88 88 135 100.0 4e-31 MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHS LETTSDILKADVIRKTLEIVLRYTADDM >gi|299856445|gb|ADWV01000006.1| GENE 140 139553 - 139729 229 58 aa, chain + ## HITS:1 COG:no KEGG:B21_01150 NR:ns ## KEGG: B21_01150 # Name: ymgC # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 58 25 82 82 96 100.0 3e-19 MTHGYVDSHIIDQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVLS >gi|299856445|gb|ADWV01000006.1| GENE 141 140061 - 141584 634 507 aa, chain + ## HITS:1 COG:ycgG_2 KEGG:ns NR:ns ## COG: ycgG_2 COG2200 # Protein_GI_number: 16129131 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 237 507 1 271 271 551 99.0 1e-156 MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAV NIAGKECNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVFPDSNLL LAPAIDTVNRLPILLYQNQFADTRILVTISDQHIRGALNVPLKGVRYVLRVADDIIGPTG DVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAAFLLD RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFI PLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRD SFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHID YIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNITFQQG YYFYKPVTYIDLVKIILSKPKVKVVVE >gi|299856445|gb|ADWV01000006.1| GENE 142 141716 - 141934 113 72 aa, chain + ## HITS:1 COG:no KEGG:c1611 NR:ns ## KEGG: c1611 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 72 13 84 84 110 98.0 2e-23 MNNSNNLDYFTLYIIFSIAFMLITLLVILIAKPSTGLGEVLVTINLLNALVWLAINLVNR LRERLVSHRDQQ >gi|299856445|gb|ADWV01000006.1| GENE 143 142334 - 142543 141 69 aa, chain + ## HITS:1 COG:b1169 KEGG:ns NR:ns ## COG: b1169 COG3468 # Protein_GI_number: 16129132 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 1 60 1 90 506 63 46.0 9e-11 MKLKKLPGFSLGLIALAVGNAYAEQFIQHDEYKHAVAIKDGKVKDIDNALVITTGNGSYG YPLQERVAS >gi|299856445|gb|ADWV01000006.1| GENE 144 142951 - 144981 960 676 aa, chain + ## HITS:1 COG:b1170 KEGG:ns NR:ns ## COG: b1170 COG3468 # Protein_GI_number: 16129133 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 334 652 5 323 338 578 94.0 1e-164 MAKGEITTHGTESYAAYANGTVVKAGDTLDYTNASVTLTDVDITTHGDNAHAIAARQGTV SFNQGEIYTTGPDAATAKIYNGGTVTLKNTSAVAHQGSGIVLESSINGQEATVDILSGSS LRSANEILYHKNETSNVTITDSEVSSAADVFINNIKGHLTVDATNSKITGSANISTDVNT HTYLSLSDNSTWDIKADSTVSNLTVDNSTVYISRADGRDVEPTRLTITENYVGNNGVLHL RTELGDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSR IFAGAYEYSLTRGNTEATNKNWYLTNFQATSGGETNSGGSSAPTVAPTPVLRLEAGSYVA NLAAANTLFVMRLNDRAGEMRYIDPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRY VSQLGAELLTGGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRSKGSVRGYCAGLYAIWFA DDISKKGAYIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAK YTWIFQPQAQAIWMGVDHNAHTEANGSRIENDANNNIQTRLGFRTFIRTQEKNSGPHGDD FEPFVEMNWIHNSKDFAVSMNGVKVEQDGASNLGEIKLGVNGNLNPAASVWGNVGVQLGD NGYNDTAVMVGLKYKF >gi|299856445|gb|ADWV01000006.1| GENE 145 145038 - 145367 448 109 aa, chain - ## HITS:1 COG:no KEGG:ECO111_1498 NR:ns ## KEGG: ECO111_1498 # Name: ymgD # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 109 1 109 109 195 100.0 3e-49 MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNA SVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK >gi|299856445|gb|ADWV01000006.1| GENE 146 145377 - 145721 356 114 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_1978 NR:ns ## KEGG: EcSMS35_1978 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 114 1 114 114 110 100.0 1e-23 MKKKILAFGLISALFCSTPAMADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGA VTEKGRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK >gi|299856445|gb|ADWV01000006.1| GENE 147 145723 - 145896 88 57 aa, chain - ## HITS:1 COG:no KEGG:ECDH10B_1224 NR:ns ## KEGG: ECDH10B_1224 # Name: ymgI, ECK4403 # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 57 1 57 57 74 100.0 1e-12 MSYSSFKIILIHVKNIIPIITATLILNYLNNSERSLVKQILIEDEIIVCATYLIPDI >gi|299856445|gb|ADWV01000006.1| GENE 148 146315 - 146641 206 108 aa, chain + ## HITS:1 COG:ECs3515 KEGG:ns NR:ns ## COG: ECs3515 COG3468 # Protein_GI_number: 15832769 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 1 108 1464 1571 1571 198 97.0 2e-51 MESKSVDTRSIYRELGATLSYNMRLGNGMEIEPCLKAAVRKEFVDDNRVKVNSDGNFVND LSGRRGIYQAGIKASFSSTLSGHFGVGYSHGAGVESPWNAVAGVNWSF >gi|299856445|gb|ADWV01000006.1| GENE 149 147013 - 147279 454 88 aa, chain - ## HITS:1 COG:ECs1668 KEGG:ns NR:ns ## COG: ECs1668 COG0851 # Protein_GI_number: 15830922 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation topological specificity factor # Organism: Escherichia coli O157:H7 # 1 88 1 88 88 148 100.0 2e-36 MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRKDILEVICKYVQIDPEM VTVQLEQKDGDISILELNVTLPEAEELK >gi|299856445|gb|ADWV01000006.1| GENE 150 147283 - 148095 871 270 aa, chain - ## HITS:1 COG:ECs1669 KEGG:ns NR:ns ## COG: ECs1669 COG2894 # Protein_GI_number: 15830923 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Escherichia coli O157:H7 # 1 270 1 270 270 506 100.0 1e-143 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVVYDF VNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCD SPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLL TRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYA DTVERLLGEERPFRFIEEEKKGFLKRLFGG >gi|299856445|gb|ADWV01000006.1| GENE 151 148119 - 148814 431 231 aa, chain - ## HITS:1 COG:minC KEGG:ns NR:ns ## COG: minC COG0850 # Protein_GI_number: 16129139 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Escherichia coli K12 # 1 231 1 231 231 440 99.0 1e-123 MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLKHAPVVLNVSALEDPVN WSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGKEKAPRPAPAPQAPAQNTT PVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIADGNIHVYGMMRGRALAGASGD RETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARLQLVENALTVQPLN >gi|299856445|gb|ADWV01000006.1| GENE 152 149340 - 149702 75 120 aa, chain + ## HITS:1 COG:no KEGG:ECO103_1278 NR:ns ## KEGG: ECO103_1278 # Name: ycgJ # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 120 3 122 122 244 100.0 9e-64 MMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLGEK AAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVDGKRSGKINQITTKMLFMCRE >gi|299856445|gb|ADWV01000006.1| GENE 153 149822 - 150223 363 133 aa, chain - ## HITS:1 COG:no KEGG:ECBD_2444 NR:ns ## KEGG: ECBD_2444 # Name: not_defined # Def: peptidase domain protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 133 1 133 133 233 98.0 1e-60 MKIKSISKAVLLLALLTSTSFAAGKNVNVEFSKGHSSAQYSGEIKGYDYDTYTFYAKKGQ KVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELRVLQTRNDARK NKTKKYNVDIQIK >gi|299856445|gb|ADWV01000006.1| GENE 154 150465 - 150758 325 97 aa, chain + ## HITS:1 COG:ECs1674 KEGG:ns NR:ns ## COG: ECs1674 COG3100 # Protein_GI_number: 15830928 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 97 12 108 108 174 98.0 4e-44 MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMILPLDGRKKLVNADIEKV KLALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK >gi|299856445|gb|ADWV01000006.1| GENE 155 150830 - 151489 701 219 aa, chain + ## HITS:1 COG:ECs1675 KEGG:ns NR:ns ## COG: ECs1675 COG0179 # Protein_GI_number: 15830929 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 445 99.0 1e-125 MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLFIKPETALCDLRQPLAI PSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDLTLRDVQGKMKKAGQPWEK AKAFDNSCPLSGFIPAAEFTGDPQNTTLGLSVNGEQRQQGTTADMIHKIVPLIAYMSKFF TLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLATRVL >gi|299856445|gb|ADWV01000006.1| GENE 156 151566 - 152027 492 153 aa, chain + ## HITS:1 COG:ECs1676 KEGG:ns NR:ns ## COG: ECs1676 COG2983 # Protein_GI_number: 15830930 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 153 6 158 158 311 100.0 4e-85 MAEHLMSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNI KTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLAEGKDLPAWHPLLTGSKAA MHGERISVRHIAVKESEVIDWQDHILNKPDWAQ >gi|299856445|gb|ADWV01000006.1| GENE 157 152234 - 153145 733 303 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_1668 NR:ns ## KEGG: ECH74115_1668 # Name: hlyE # Def: hemolysin E # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 303 49 351 351 511 99.0 1e-144 MTEIVADKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASV LVGDIKTLLMDSQDKYFEATQTVYEWCGVATQLLAAYILLFDEHNEKKASAQKDILIKVL DDGITKLNEAQKSLLVSSQSFNNASGKLLALDSQLTNDFSEKSSYFQSQVDKIRKEAYAG AAAGVVAGPFGLIISYSIAAGVVEGKLIPELKNKLKSVQSFFTTLSNTVKQANKDIDAAK LKLTTEIAAIGEIKTETETTRFYVDYDDLMLSLLKEAAKKMINTCNEYQKRHGKKTLFEV PEV >gi|299856445|gb|ADWV01000006.1| GENE 158 153518 - 153937 335 139 aa, chain + ## HITS:1 COG:ECs1678 KEGG:ns NR:ns ## COG: ECs1678 COG1974 # Protein_GI_number: 15830932 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 # 1 139 1 139 139 257 100.0 5e-69 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS SEDTLDVFGVVIHVVKAMR >gi|299856445|gb|ADWV01000006.1| GENE 159 153937 - 155205 527 422 aa, chain + ## HITS:1 COG:umuC KEGG:ns NR:ns ## COG: umuC COG0389 # Protein_GI_number: 16129147 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli K12 # 1 422 1 422 422 876 100.0 0 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR VK >gi|299856445|gb|ADWV01000006.1| GENE 160 155251 - 155781 671 176 aa, chain - ## HITS:1 COG:ECs1680 KEGG:ns NR:ns ## COG: ECs1680 COG1495 # Protein_GI_number: 15830934 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 330 100.0 1e-90 MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLCIYERCALFGVLGAALI GAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFATCDFMVRFPEWLPLDKWV PQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLVVISQPFKAKKRDLFGR >gi|299856445|gb|ADWV01000006.1| GENE 161 155927 - 157468 1681 513 aa, chain - ## HITS:1 COG:ECs1681 KEGG:ns NR:ns ## COG: ECs1681 COG3067 # Protein_GI_number: 15830935 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Escherichia coli O157:H7 # 1 513 1 513 513 897 100.0 0 MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAGWLLVAEFIFTLAMALK CYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFMVAGIYFMKQLLLFIFTRL LLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASSRTEDTDLQD DSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAAGWHFGDFFL RMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKVREVLQQFDDQSRHQRTRQDKIRLI VQAIIGVWLVTALALHLAEVGLIGLSVIILATSLTGVTDEHAIGKAFTESLPFTALLTVF FSVVAVIIDQQLFSPIIQFVLQASEHAQLSLFYIFNGLLSSISDNVFVGTIYINEAKAAM ESGAITLKQYELLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVWMALP YTLVLTLVGLLCVEFTLAPVTEWFMQMGWIATL >gi|299856445|gb|ADWV01000006.1| GENE 162 157690 - 158409 764 239 aa, chain + ## HITS:1 COG:ECs1682 KEGG:ns NR:ns ## COG: ECs1682 COG2186 # Protein_GI_number: 15830936 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 492 100.0 1e-139 MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGW LTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQH PDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYF ANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQKNLPGDLAIQGR >gi|299856445|gb|ADWV01000006.1| GENE 163 158461 - 159993 1534 510 aa, chain - ## HITS:1 COG:ycgB KEGG:ns NR:ns ## COG: ycgB COG2719 # Protein_GI_number: 16129151 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 510 1 510 510 1038 100.0 0 MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTYPHQIEVITSEQMMDAY SSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVM AHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITECEERYGVDEVERLLDSCHALM NYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRYPSEPQ ENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDE GKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTEEDKYWF PDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEE GYREIRNRLSSQYNLSNLEPNIQIWNVDLRGDRSLTLRYIPHNRAPLDRGRKEVLKHVHR LWGFDVMLEQQNEDGSIELLERCPPRMGNL >gi|299856445|gb|ADWV01000006.1| GENE 164 160323 - 161621 1392 432 aa, chain + ## HITS:1 COG:ECs1684 KEGG:ns NR:ns ## COG: ECs1684 COG0665 # Protein_GI_number: 15830938 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 892 99.0 0 MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGATLETSAANAGQISPGYAAPWAAPGV PLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLK ALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDAGVPYQLLESSRLAEVEPALA EVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGEQIYGVKCG DEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIA ITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQATFWTGLRPMTPD GTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQLLSDLLSGRTPAIPYEDLSVARYSRGFT PSRPGHLHGAHS >gi|299856445|gb|ADWV01000006.1| GENE 165 161631 - 162701 942 356 aa, chain + ## HITS:1 COG:ZdadX KEGG:ns NR:ns ## COG: ZdadX COG0787 # Protein_GI_number: 15801412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Escherichia coli O157:H7 EDL933 # 1 356 1 356 356 712 99.0 0 MTRPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSALGATDGFALLN LEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLDI YLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARIEQAA EGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLSSEII GVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGTVS MDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCALALRVPVVTV >gi|299856445|gb|ADWV01000006.1| GENE 166 162804 - 162953 67 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|188493462|ref|ZP_03000732.1| ## NR: gi|188493462|ref|ZP_03000732.1| hypothetical protein Ec53638_4549 [Escherichia coli 53638] # 8 49 1 42 42 76 100.0 4e-13 MIVSIKRMDTISPEPELTAQAFYIKRLRFIVDSNSTSDKSRFTLDGACT >gi|299856445|gb|ADWV01000006.1| GENE 167 163087 - 164823 1714 578 aa, chain - ## HITS:1 COG:STM1801 KEGG:ns NR:ns ## COG: STM1801 COG3263 # Protein_GI_number: 16765142 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain # Organism: Salmonella typhimurium LT2 # 1 577 1 577 577 962 92.0 0 MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPF AYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLI EGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQQHE SSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFALTTA LEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAI PALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLEN ARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQ LSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALG KLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAA PVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAEEEAES >gi|299856445|gb|ADWV01000006.1| GENE 168 164918 - 165832 806 304 aa, chain - ## HITS:1 COG:ldcA KEGG:ns NR:ns ## COG: ldcA COG1619 # Protein_GI_number: 16129155 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Escherichia coli K12 # 1 304 1 304 304 616 98.0 1e-176 MSLFHLIAPSGYCIKQHAALRGIHRLTDEGHQVNNVEVIARRCERFAGTETERLEDLNSL ARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAQGN VITFSGPMLVANFGADELNAFTEHHFWLALRNKTFTIEWQGEGPTCQTEGTLWGGNLAML ISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYHAGILPRQKAIILGSFSGSTPND YDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAHAILNNTREGTQLTISGHP VLKM >gi|299856445|gb|ADWV01000006.1| GENE 169 165805 - 165993 77 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293409572|ref|ZP_06653148.1| ## NR: gi|293409572|ref|ZP_06653148.1| predicted protein [Escherichia coli B354] # 1 62 1 62 62 127 100.0 2e-28 MGQLSETETWQFLADNRNEMYIMPLRCAVVTSTAIPGYKDRRSEIEMVCLFDCVISGLFI KA >gi|299856445|gb|ADWV01000006.1| GENE 170 165932 - 166543 527 203 aa, chain + ## HITS:1 COG:ECs1687 KEGG:ns NR:ns ## COG: ECs1687 COG0741 # Protein_GI_number: 15830942 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli O157:H7 # 1 203 39 241 241 405 99.0 1e-113 MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAI IAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAY LNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDRKKAISKINDLDADEFLDHV ARNHPAPQAPRYIYKLEQALDAM >gi|299856445|gb|ADWV01000006.1| GENE 171 166545 - 167279 590 244 aa, chain - ## HITS:1 COG:ycgR KEGG:ns NR:ns ## COG: ycgR COG5581 # Protein_GI_number: 16129157 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted glycosyltransferase # Organism: Escherichia coli K12 # 1 244 1 244 244 481 99.0 1e-136 MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKILAITPDKLVLDFGSQAE DNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFITVPPPTLWFVQRRRYFRIS APLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKPAELQEGMRFAQIEVNMGQWG VFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSPTVERQLQRIIFSLEREAREKAD KVRD >gi|299856445|gb|ADWV01000006.1| GENE 172 167480 - 167734 299 84 aa, chain + ## HITS:1 COG:ymgE KEGG:ns NR:ns ## COG: ymgE COG2261 # Protein_GI_number: 16129158 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 84 1 84 84 105 97.0 3e-23 MGIIAWIIFGLIAGIIAKLIMPGRDGGGFFLTCILGIVGAVVGGWLATMFGIGGSISGFN LHSFLVAVVGAILVLGVFRLLRRE >gi|299856445|gb|ADWV01000006.1| GENE 173 168056 - 168352 132 98 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_1342 NR:ns ## KEGG: EcE24377A_1342 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 98 49 146 146 204 100.0 8e-52 MLQLREEEWSEFFFWLLNSLECLDYVIINLTPESKKTLMSEHRNNIQVAIDALYRQRRYK SPGDDSETLTRRNDAIFGNHVWQTFAQYFPPGLEKPSV >gi|299856445|gb|ADWV01000006.1| GENE 174 168431 - 170128 1700 565 aa, chain - ## HITS:1 COG:treA KEGG:ns NR:ns ## COG: treA COG1626 # Protein_GI_number: 16129160 # Func_class: G Carbohydrate transport and metabolism # Function: Neutral trehalase # Organism: Escherichia coli K12 # 1 565 1 565 565 1103 100.0 0 MKSPAPSRPQKMALIPACIFLCFAALSVQAEETPVTPQPPDILLGPLFNDVQNAKLFPDQ KTFADAVPNSDPLMILADYRMQQNQSGFDLRHFVNVNFTLPKEGEKYVPPEGQSLREHID GLWPVLTRSTENTEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADM VANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGDAALKQYLPQMQKEYAY WMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIY RDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAM ANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAAAKDRAN KMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMDISWHF LTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQPCD NVPATRPTVKSATTQPSTKEAQPTP >gi|299856445|gb|ADWV01000006.1| GENE 175 170448 - 171866 1182 472 aa, chain - ## HITS:1 COG:ycgC_3 KEGG:ns NR:ns ## COG: ycgC_3 COG1080 # Protein_GI_number: 16129161 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli K12 # 258 472 1 215 215 416 99.0 1e-116 MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVA DADHVLVMMDMGSALLSAETALELLAPKIAAKVRLCAAPLVEGTLAATVSAASGADIDKV IFDAMHALEAKREQLGLPSSDTKISDTCPAYDEEARSLAVVIKNRNGLHVRPASRLVYTL STFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFG ETEEVVPPTLRPVPPVSGKAFYYQPVLCTVQAKSTLTVEEEQERLRQAIDFTLLDLMTLT AKAEASGLDDIAAIFSGHHTLLDDPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQL DDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILLAENIYPSTVLQLDPAVVKGI CLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG >gi|299856445|gb|ADWV01000006.1| GENE 176 171877 - 172509 685 210 aa, chain - ## HITS:1 COG:ECs1704 KEGG:ns NR:ns ## COG: ECs1704 COG2376 # Protein_GI_number: 15830958 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli O157:H7 # 1 210 1 210 210 392 97.0 1e-109 MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKD IGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLTLEELYQMFRDGVDGVISR GKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASRIAESAAQSTITMQARKGRAS YLGERSIGHQDPGATSVMFMMQMLALAAKE >gi|299856445|gb|ADWV01000006.1| GENE 177 172520 - 173590 1095 356 aa, chain - ## HITS:1 COG:ycgT KEGG:ns NR:ns ## COG: ycgT COG2376 # Protein_GI_number: 16129163 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Escherichia coli K12 # 1 356 11 366 366 723 98.0 0 MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAGKVALLSGGGSGHEPMH CGYIGQGMLSGACPGEIFTSPTPDKIFECSMQIDGGEGVLLIIKNYTGDILNFETATELL HDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLVGAAAERGDSLDACAELGRKL NNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRSFSSLDQTVDEMFD TLLENGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRL TTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWGK >gi|299856445|gb|ADWV01000006.1| GENE 178 173818 - 175737 1306 639 aa, chain + ## HITS:1 COG:ycgU KEGG:ns NR:ns ## COG: ycgU COG3284 # Protein_GI_number: 16129164 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; K Transcription # Function: Transcriptional activator of acetoin/glycerol metabolism # Organism: Escherichia coli K12 # 1 639 4 642 642 1266 99.0 0 MSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFASIYRRKKAMLTLGQAA LEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSALGFNDGTYCAEGIIGTCALSL AAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRLTGTIALACPVEQTTAADLPLTLA IAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVISWDEQGNLQFINAQAARVLRLDA TASQGRAITELLTLPAVLQQAIKQAHPLKHVEATFESQHQFIDAVITLKPIIETQGTSFI LLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEEGVG KALLSQAIHNESERAAGPYIAVNCELYGDAALAEEFIGGDRTDNENGRLSRLELAHGGTL FLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPVDVKVIATTTADLAMLVEQNRFSRQ LYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGND FELYSVIENLALSSDNGRIRVSDLPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAA QVTGGRIQEMSALLGIGRTTLWRKMKQHGIDAGQFKRRV >gi|299856445|gb|ADWV01000006.1| GENE 179 175837 - 178704 1352 955 aa, chain - ## HITS:1 COG:ycgV_2 KEGG:ns NR:ns ## COG: ycgV_2 COG3468 # Protein_GI_number: 16129165 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 543 955 1 413 413 674 99.0 0 MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLLIAADTGSQYGTNITIN DGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVNDASGYSKGIIIQGKNSSLT ANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDGIIIGHSSTLTATQFTIENSN GIGLTINDYGTSVDLGSGSKITTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAM GINVQKNSVVDLGTNSTIKTNGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTI GADSHISSAQGGGLVTSGSDAIINFTGTAAQRNSIFSGGSYGASAQTATAVVNMQNTDIT VDRNGSLALGLWALSGGRITGDSLAITGAAGARGIYAMTNSQIDLTSDLVIDMSTPDQMA IATQHDDGYAASRINASGRMLINGSVLSKGGLINLDMHPGSVWTGSSLSDNVNGGKLDVA MNNSVWNVTSNSNLDTLALSHSTVDFASHGSTAGTFATLNVENLSGNSTFIMRADVVGEG NGVNNKGDLLNISGSSAGNHVLAIRNQGSEATTGNEVLTVVKTTDGAASFSASSQVELGG YLYDVRKNGTNWELYASGTVPEPTPNPEPTPAPAQPPIVNPDPTPEPAPTPKPTTTADAG GNYLNVGYLLNYVENRTLMQRMGDLRNQSKDGNIWLRSYGGSLDSFASGKLSGFDMGYSG IQFGGDKRLSDVMPLYVGLYIGSTHASPDYSGGDGTARSDYMGMYASYMAQNGFYSDLVI KASRQKNSFHVLDSQNNGVNANGTANGMSISLEAGQRFNLSPTGYGFYIEPQTQLTYSHQ NEMAMKASNGLNIHLNHYESLLGRASMILGYDITAGNSQLNIYVKTGAIREFSGDTEYLL NNSREKYSFKGNGWNNGVGVSAQYNKQHTFYLEADYTQGNLFDQKQVNGGYRFSF >gi|299856445|gb|ADWV01000006.1| GENE 180 179547 - 180638 1284 363 aa, chain - ## HITS:1 COG:ECs1708 KEGG:ns NR:ns ## COG: ECs1708 COG0012 # Protein_GI_number: 15830962 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Escherichia coli O157:H7 # 1 363 1 363 363 721 100.0 0 MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN PADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLRA LDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPYLDQVREIAAKEGSVVVPVCAAV EADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIPVGAT APQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDVMNFL FNV >gi|299856445|gb|ADWV01000006.1| GENE 181 180755 - 181339 459 194 aa, chain - ## HITS:1 COG:ECs1709 KEGG:ns NR:ns ## COG: ECs1709 COG0193 # Protein_GI_number: 15830963 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Escherichia coli O157:H7 # 1 194 1 194 194 370 100.0 1e-103 MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVR LLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDI ISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDG LTKATNRLHAFKAQ >gi|299856445|gb|ADWV01000006.1| GENE 182 181617 - 181895 273 92 aa, chain + ## HITS:1 COG:no KEGG:LF82_2742 NR:ns ## KEGG: LF82_2742 # Name: ychH # Def: uncharacterized protein YchH # Organism: E.coli_LF82 # Pathway: not_defined # 1 92 1 92 92 152 100.0 3e-36 MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAG ARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS >gi|299856445|gb|ADWV01000006.1| GENE 183 181950 - 183602 1937 550 aa, chain - ## HITS:1 COG:ECs1711 KEGG:ns NR:ns ## COG: ECs1711 COG0659 # Protein_GI_number: 15830965 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Escherichia coli O157:H7 # 1 550 1 550 550 919 100.0 0 MPFRALIDACWKEKYTAARFTRDLIAGITVGIIAIPLAMALAIGSGVAPQYGLYTAAVAG IVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVATLLSGIFLILMGLARFGRLIE YIPVSVTLGFTSGIGITIGTMQIKDFLGLQMAHVPEHYLQKVGALFMALPTINVGDAAIG IVTLGILVFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGHVATIGSQFHYVLADGSQGNG IPQLLPQLVLPWDLPNSEFTLTWDSIRTLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHK ANSELVGQGLGNIIAPFFGGITATAAIARSAANVRAGATSPISAVIHSILVILALLVLAP LLSWLPLSAMAALLLMVAWNMSEAHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISV GIVLASLLFMRRIARMTRLAPVVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRI VILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPIPGRLAFF PNRRAAMADL >gi|299856445|gb|ADWV01000006.1| GENE 184 183754 - 184767 1012 337 aa, chain - ## HITS:1 COG:ECs1712 KEGG:ns NR:ns ## COG: ECs1712 COG0462 # Protein_GI_number: 15830966 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Escherichia coli O157:H7 # 23 337 1 315 315 595 99.0 1e-170 MPGPHSFRQILSTNGRMPEVLLVPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDG EVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQD RRVRSARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQ LNLDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIPLS DEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH >gi|299856445|gb|ADWV01000006.1| GENE 185 184852 - 185703 550 283 aa, chain - ## HITS:1 COG:ECs1713 KEGG:ns NR:ns ## COG: ECs1713 COG1947 # Protein_GI_number: 15830967 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 283 1 283 283 563 99.0 1e-160 MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGV EHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNH LWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIP TPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGT GACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLSPLHRAML >gi|299856445|gb|ADWV01000006.1| GENE 186 185703 - 186326 547 207 aa, chain - ## HITS:1 COG:ECs1714 KEGG:ns NR:ns ## COG: ECs1714 COG3017 # Protein_GI_number: 15830968 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein involved in outer membrane biogenesis # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 405 100.0 1e-113 MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQDVRNLNQYQTRGAFAY ISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGNVQLVDNKGQRYTADDAEE MIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEITYSQNGKNWKVVYGGYDTKT QPAMPANMELTDGGQRIKLKMDNWIVK >gi|299856445|gb|ADWV01000006.1| GENE 187 186540 - 187796 1284 418 aa, chain + ## HITS:1 COG:ECs1715 KEGG:ns NR:ns ## COG: ECs1715 COG0373 # Protein_GI_number: 15830969 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Escherichia coli O157:H7 # 1 418 1 418 418 730 99.0 0 MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGGVVLSTCNRTELYLSVE EQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMRVASGLDSLVLGEPQILGQ VKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIFESL STVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEVGAEVIALSEIDERL READIIISSTASPLPIIGKGMVERALKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSV DDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAWLRAQSASETIREYRSQAEHVRDELT AKALAALEQGGDAQAIMQDLAWKLTNRLIHAPTKSLQQAARDGDNERLNILRDSLGLE >gi|299856445|gb|ADWV01000006.1| GENE 188 187838 - 188920 1163 360 aa, chain + ## HITS:1 COG:ECs1716 KEGG:ns NR:ns ## COG: ECs1716 COG0216 # Protein_GI_number: 15830970 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Escherichia coli O157:H7 # 1 360 1 360 360 632 100.0 0 MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQE DIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTG GDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESG GHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTT DSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGS GDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSEQE >gi|299856445|gb|ADWV01000006.1| GENE 189 188920 - 189753 482 277 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 7 274 23 289 294 190 40 5e-47 MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLT RRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGT GAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMI VSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW QQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYYQ >gi|299856445|gb|ADWV01000006.1| GENE 190 189750 - 190142 402 130 aa, chain + ## HITS:1 COG:ECs1718 KEGG:ns NR:ns ## COG: ECs1718 COG3094 # Protein_GI_number: 15830972 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 130 1 130 130 207 99.0 5e-54 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTVLLLSGIALM AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK LATTKVPLLG >gi|299856445|gb|ADWV01000006.1| GENE 191 190146 - 190955 719 269 aa, chain + ## HITS:1 COG:ECs1719 KEGG:ns NR:ns ## COG: ECs1719 COG2912 # Protein_GI_number: 15830973 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 521 100.0 1e-148 MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLE KLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVI FPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNISPSAELFYEDLDEADNIEVI RKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSY FVEQCPEDPISEMIRAQINNIAHKHIVLH >gi|299856445|gb|ADWV01000006.1| GENE 192 190991 - 191845 1139 284 aa, chain + ## HITS:1 COG:ECs1720 KEGG:ns NR:ns ## COG: ECs1720 COG2877 # Protein_GI_number: 15830974 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 567 99.0 1e-162 MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDK ANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLAR QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNEKVILCDRGANFGYDNLVVD MLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEA HPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKGFEELDTSK >gi|299856445|gb|ADWV01000006.1| GENE 193 191994 - 192128 116 44 aa, chain - ## HITS:1 COG:no KEGG:SBO_1851 NR:ns ## KEGG: SBO_1851 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 1 44 48 91 91 86 100.0 3e-16 MLSLQQGGYMTLAQFAMIFWHDLAAPILAGIITAAIVGWWRNRK >gi|299856445|gb|ADWV01000006.1| GENE 194 192529 - 192663 120 44 aa, chain - ## HITS:1 COG:no KEGG:SBO_1851 NR:ns ## KEGG: SBO_1851 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 1 44 48 91 91 84 97.0 8e-16 MLSLQQGGYMTLAKFAMIFWHDLAAPILAGIITAAIVGWWRNRK >gi|299856445|gb|ADWV01000006.1| GENE 195 193065 - 193199 121 44 aa, chain - ## HITS:1 COG:no KEGG:SBO_1851 NR:ns ## KEGG: SBO_1851 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 1 44 48 91 91 83 95.0 3e-15 MLSLQQGGYMTLAQFAMTFWHDLAAPILAGIITAAIVSWWRNRK >gi|299856445|gb|ADWV01000006.1| GENE 196 193577 - 194677 1124 366 aa, chain - ## HITS:1 COG:STM1771 KEGG:ns NR:ns ## COG: STM1771 COG0387 # Protein_GI_number: 16765112 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/H+ antiporter # Organism: Salmonella typhimurium LT2 # 1 366 1 366 366 577 93.0 1e-165 MSNAQEAVKTRHKETSLIFPVLALVVLFLWGSSQTLPVVIAINLLALIGILSSAFSVVRH ADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVG FSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPAANFSTGQALLVALISAA MYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAHSSVWHAIWLIIHLIAVIAVTKM NASPLETLLDSMNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATIS LTVPVVTLIAFMTGNELQFALGAPEMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAY LMTIFA >gi|299856445|gb|ADWV01000006.1| GENE 197 194947 - 195177 283 76 aa, chain + ## HITS:1 COG:ECs1722 KEGG:ns NR:ns ## COG: ECs1722 COG4572 # Protein_GI_number: 15830976 # Func_class: R General function prediction only # Function: Putative cation transport regulator # Organism: Escherichia coli O157:H7 # 1 76 1 76 76 98 98.0 2e-21 MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKDDRRDDASREETAHKVAWAAV KHEYAKGDDDKWHKKS >gi|299856445|gb|ADWV01000006.1| GENE 198 195356 - 196030 588 224 aa, chain + ## HITS:1 COG:ECs1723 KEGG:ns NR:ns ## COG: ECs1723 COG3703 # Protein_GI_number: 15830977 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in cation transport # Organism: Escherichia coli O157:H7 # 1 224 16 239 239 456 99.0 1e-128 MNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEEPVWIFGYGSLMWNPALEFTESC TGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKRE MITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQ YLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENFPDGVLRPGFA >gi|299856445|gb|ADWV01000006.1| GENE 199 196074 - 196427 367 117 aa, chain - ## HITS:1 COG:ECs1724 KEGG:ns NR:ns ## COG: ECs1724 COG1553 # Protein_GI_number: 15830978 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Escherichia coli O157:H7 # 1 117 1 117 117 224 100.0 2e-59 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPGEGYN IQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF >gi|299856445|gb|ADWV01000006.1| GENE 200 196654 - 198006 771 450 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_1370 NR:ns ## KEGG: EcE24377A_1370 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 450 15 464 464 864 99.0 0 MLVAGGTANAQSTFEQKAANPFDNNNDGLPDLGMAPENHDGEKHFAEIVKDFGETSMNDN GLDTGEQAKAFALGKVRDALSQQVNQHVESWLSPWGNASVDVKVDNEGHFTGSRGSWFVP LQDNDRYLTWSQLGLTQQDDGLVSNVGVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGA EAWGEYLRLSANFYQPFAAWHEQTATQEQRMARGYDLTARMRMPFYQHLNTSVSVEQYFG DRVDLFNSGTGYHNPVALSLGLNYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPL KKQLSAGEVAESQSLRGSRYDNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKL QIRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGERASNHWRLSVVVEDN QGQRVSSNEITLTLVEPFDALSNDELRWEP >gi|299856445|gb|ADWV01000006.1| GENE 201 198007 - 198657 867 216 aa, chain - ## HITS:1 COG:ECs1726 KEGG:ns NR:ns ## COG: ECs1726 COG2197 # Protein_GI_number: 15830980 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 346 100.0 2e-95 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF >gi|299856445|gb|ADWV01000006.1| GENE 202 198650 - 200446 1476 598 aa, chain - ## HITS:1 COG:ECs1727 KEGG:ns NR:ns ## COG: ECs1727 COG3850 # Protein_GI_number: 15830981 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Escherichia coli O157:H7 # 1 598 1 598 598 1133 100.0 0 MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRL LAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNR ETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQ PWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAG LEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEF TCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQ LVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQG DALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPV KLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCG VPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE >gi|299856445|gb|ADWV01000006.1| GENE 203 200472 - 200690 118 72 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_1245 NR:ns ## KEGG: ECIAI1_1245 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 72 1 72 72 143 100.0 2e-33 MSNNLNECDDAFWNGSILGYWLKYTHTRKELLLICRVVSRFTSVRVGILQHREKSHNFYE ITVLTMGNDKYQ >gi|299856445|gb|ADWV01000006.1| GENE 204 200785 - 202176 1113 463 aa, chain + ## HITS:1 COG:narK KEGG:ns NR:ns ## COG: narK COG2223 # Protein_GI_number: 16129186 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Escherichia coli K12 # 1 463 1 463 463 801 100.0 0 MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPCLLLAFCVWMLFSAVAV NLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGRRWTAFSTGILIIPCVWLG FAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPKQKQGGALGLNGGLGNMGVSV MQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWIWVPFLAIFTIAAWFGMNDLATS KASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQFPDVQILQYAFFGPFI GALARSAGGALSDRLGGTRVTLVNFILMAIFSGLLFLTLPTDGQGGSFMAFFAVFLALFL TAGLGSGSTFQMISVIFRKLTMDRVKAEGGSDERAMREAATDTAAALGFISAIGAIGGFF IPKAFGSSLALTGSPVGAMKVFLIFYIACVVITWAVYGRHSKK >gi|299856445|gb|ADWV01000006.1| GENE 205 202692 - 206435 4567 1247 aa, chain + ## HITS:1 COG:ECs1729 KEGG:ns NR:ns ## COG: ECs1729 COG5013 # Protein_GI_number: 15830983 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Escherichia coli O157:H7 # 1 1247 1 1247 1247 2601 100.0 0 MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMK MWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKN YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ GTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD LVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLSL LGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTLA NYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMII VGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQ RPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAP QLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGS SGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTC LYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVG HLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERF TSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLA PETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEH VSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSN GNPEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFN SNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIG GYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK >gi|299856445|gb|ADWV01000006.1| GENE 206 206432 - 207970 1896 512 aa, chain + ## HITS:1 COG:ECs1730 KEGG:ns NR:ns ## COG: ECs1730 COG1140 # Protein_GI_number: 15830984 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Escherichia coli O157:H7 # 1 512 1 512 512 1093 100.0 0 MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNVETKPGQGFPTDWENQE KYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDFDYQNLHTAPEGSKS QPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKNFDNIQKAMYSQFENTFMMYL PRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGK SEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDADAIERAASTENEKDLYQRQLEVF LDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMAMEWKLALPLHPEYRTLPMVWYVPPLS PIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTKPVLRALKRMLAMRHYKRAET VDGKVDTRALEEVGLTEAQAQEMYRYLAIANYEDRFVVPSSHRELAREAFPEKNGCGFTF GDGCHGSDTKFNLFNSRRIDAIDVTSKTEPHP >gi|299856445|gb|ADWV01000006.1| GENE 207 207967 - 208677 882 236 aa, chain + ## HITS:1 COG:ECs1731 KEGG:ns NR:ns ## COG: ECs1731 COG2180 # Protein_GI_number: 15830985 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 426 98.0 1e-119 MIELVIVSRLLEYPDAALWQHQQEMFEAIAASKNLSKEDAHALGIFLRDLTAMDPLDAQA QYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHGLQLNSRELPDHLPLYLEY LSQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVMFDLLLKLANTAIDSDKVAEKIAD EARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRRFAGAVAPQYLNITTGGQH >gi|299856445|gb|ADWV01000006.1| GENE 208 208677 - 209354 894 225 aa, chain + ## HITS:1 COG:ECs1732 KEGG:ns NR:ns ## COG: ECs1732 COG2181 # Protein_GI_number: 15830986 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Escherichia coli O157:H7 # 1 225 1 225 225 422 100.0 1e-118 MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGIL GIFVGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCLIGGVLLLKRRLFSPRVRA TTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDGV AFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKYQLVRARH Prediction of potential genes in microbial genomes Time: Sun May 15 15:17:06 2011 Seq name: gi|299856444|gb|ADWV01000007.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont6.1, whole genome shotgun sequence Length of sequence - 189643 bp Number of predicted genes - 183, with homology - 182 Number of transcription units - 92, operones - 42 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 198 - 257 7.7 1 1 Tu 1 . + CDS 381 - 1625 1496 ## COG3633 Na+/serine symporter + Term 1634 - 1670 6.2 2 2 Tu 1 . - CDS 1630 - 2181 325 ## EC55989_3504 conserved hypothetical protein; putative inner membrane protein - Term 2201 - 2237 6.4 3 3 Op 1 3/0.586 - CDS 2264 - 3751 1551 ## COG2721 Altronate dehydratase 4 3 Op 2 . - CDS 3766 - 5178 1885 ## COG1904 Glucuronate isomerase - Prom 5285 - 5344 3.1 + Prom 5364 - 5423 3.0 5 4 Tu 1 . + CDS 5660 - 6958 1719 ## COG0477 Permeases of the major facilitator superfamily + Term 6979 - 7020 7.3 - Term 6973 - 7002 1.2 6 5 Op 1 . - CDS 7046 - 8134 557 ## ECO103_3839 putative minor pilin and initiator protein 7 5 Op 2 . - CDS 8131 - 10833 1740 ## EC55989_3509 conserved hypothetical protein; putative exported protein - Term 10847 - 10877 3.0 8 6 Op 1 . - CDS 10907 - 11407 583 ## ECO103_3841 putative fimbrial subunit 9 6 Op 2 . - CDS 11437 - 12060 378 ## EC55989_3511 putative fimbrial protein + Prom 12309 - 12368 7.2 10 7 Tu 1 . + CDS 12449 - 13225 990 ## COG2186 Transcriptional regulators + Term 13237 - 13272 4.1 + Prom 13342 - 13401 6.0 11 8 Op 1 . + CDS 13570 - 14232 535 ## COG0586 Uncharacterized membrane-associated protein 12 8 Op 2 . + CDS 14251 - 14619 264 ## JW3067 conserved hypothetical protein + Term 14683 - 14721 6.4 + Prom 14626 - 14685 4.1 13 9 Op 1 . + CDS 14751 - 15134 488 ## SSON_3256 hypothetical protein 14 9 Op 2 7/0.103 + CDS 15172 - 15477 454 ## COG4575 Uncharacterized conserved protein 15 9 Op 3 . + CDS 15480 - 15884 442 ## COG5393 Predicted membrane protein 16 9 Op 4 . + CDS 15874 - 16173 408 ## ECSP_4074 hypothetical protein + Term 16183 - 16213 3.4 + Prom 16189 - 16248 1.8 17 10 Op 1 3/0.586 + CDS 16269 - 16751 509 ## COG2259 Predicted membrane protein + Term 16779 - 16808 2.1 18 10 Op 2 4/0.379 + CDS 16821 - 17807 1025 ## COG0435 Predicted glutathione S-transferase + Term 17934 - 17970 2.4 + Prom 18000 - 18059 5.2 19 11 Tu 1 6/0.138 + CDS 18100 - 18465 341 ## COG3152 Predicted membrane protein + Term 18479 - 18513 3.5 + Prom 18499 - 18558 6.4 20 12 Tu 1 . + CDS 18707 - 19063 382 ## COG3152 Predicted membrane protein + Term 19074 - 19104 3.0 - Term 19060 - 19091 3.2 21 13 Tu 1 . - CDS 19114 - 20010 1048 ## COG0583 Transcriptional regulator + Prom 19998 - 20057 1.7 22 14 Op 1 . + CDS 20115 - 20816 587 ## COG1741 Pirin-related protein 23 14 Op 2 . + CDS 20839 - 21003 217 ## EC55989_3525 hypothetical protein - Term 21162 - 21195 -0.5 24 15 Op 1 3/0.586 - CDS 21215 - 22525 1225 ## COG3681 Uncharacterized conserved protein 25 15 Op 2 10/0.034 - CDS 22553 - 23884 1290 ## COG0814 Amino acid permeases - Prom 24070 - 24129 4.8 - Term 24105 - 24134 2.1 26 16 Op 1 1/0.828 - CDS 24159 - 25523 1221 ## COG1760 L-serine deaminase 27 16 Op 2 1/0.828 - CDS 25595 - 25984 436 ## COG0251 Putative translation initiation inhibitor, yjgF family 28 16 Op 3 3/0.586 - CDS 25998 - 28292 2612 ## COG1882 Pyruvate-formate lyase 29 16 Op 4 3/0.586 - CDS 28326 - 29534 1105 ## COG0282 Acetate kinase 30 16 Op 5 4/0.379 - CDS 29560 - 30891 1436 ## COG0814 Amino acid permeases 31 16 Op 6 4/0.379 - CDS 30913 - 31902 983 ## COG1171 Threonine dehydratase - Prom 31933 - 31992 4.9 32 16 Op 7 . - CDS 32001 - 32939 717 ## COG0583 Transcriptional regulator - Prom 33137 - 33196 8.1 + Prom 33037 - 33096 4.0 33 17 Tu 1 . + CDS 33128 - 33472 65 ## EC55989_3536 DNA-binding transcriptional activator TdcR + Term 33620 - 33659 0.0 + Prom 33633 - 33692 3.5 34 18 Op 1 . + CDS 33728 - 34267 46 ## ECSE_3404 hypothetical protein 35 18 Op 2 . + CDS 34289 - 35476 306 ## ECIAI1_3270 hypothetical protein + Term 35596 - 35634 3.0 + Prom 35578 - 35637 4.1 36 19 Tu 1 . + CDS 35814 - 36794 813 ## COG3547 Transposase and inactivated derivatives + Term 37004 - 37035 1.1 - Term 36806 - 36836 3.0 37 20 Op 1 7/0.103 - CDS 37036 - 37683 622 ## COG0491 Zn-dependent hydrolases, including glyoxylases 38 20 Op 2 9/0.034 - CDS 37710 - 38258 412 ## COG3108 Uncharacterized protein conserved in bacteria - Prom 38311 - 38370 2.4 - Term 38304 - 38350 5.5 39 21 Tu 1 4/0.379 - CDS 38439 - 40286 1311 ## COG2989 Uncharacterized protein conserved in bacteria - Prom 40402 - 40461 6.5 - Term 40510 - 40540 3.0 40 22 Op 1 8/0.034 - CDS 40547 - 45007 6115 ## COG3096 Uncharacterized protein involved in chromosome partitioning 41 22 Op 2 7/0.103 - CDS 45007 - 45711 788 ## COG3095 Uncharacterized protein involved in chromosome partitioning 42 22 Op 3 6/0.138 - CDS 45692 - 47014 1557 ## COG3006 Uncharacterized protein involved in chromosome partitioning 43 22 Op 4 . - CDS 47011 - 47796 730 ## COG0500 SAM-dependent methyltransferases - Prom 47929 - 47988 5.2 44 23 Tu 1 . + CDS 47932 - 48711 664 ## COG1434 Uncharacterized conserved protein + Term 48933 - 48970 -0.9 45 24 Tu 1 . - CDS 48688 - 49581 709 ## JW0902 conserved hypothetical protein - Prom 49618 - 49677 4.8 - Term 49662 - 49703 3.4 46 25 Op 1 11/0.000 - CDS 49735 - 50481 833 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 47 25 Op 2 4/0.379 - CDS 50478 - 50660 180 ## COG2835 Uncharacterized conserved protein 48 25 Op 3 4/0.379 - CDS 50712 - 51944 809 ## COG3214 Uncharacterized protein conserved in bacteria 49 25 Op 4 9/0.034 - CDS 51981 - 52967 600 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 50 25 Op 5 5/0.241 - CDS 52964 - 54712 242 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 51 25 Op 6 2/0.690 - CDS 54749 - 57013 705 ## COG0658 Predicted membrane metal-binding protein - Prom 57094 - 57153 2.8 - Term 57157 - 57197 8.3 52 26 Tu 1 . - CDS 57220 - 57504 328 ## COG0776 Bacterial nucleoid DNA-binding protein - Term 57549 - 57578 3.5 53 27 Op 1 . - CDS 57624 - 57722 150 ## PROTEIN SUPPORTED gi|238903721|ref|ZP_04649193.1| ribosomal protein S1 54 27 Op 2 21/0.000 - CDS 57664 - 59337 2807 ## PROTEIN SUPPORTED gi|15800772|ref|NP_286786.1| 30S ribosomal protein S1 - Term 59391 - 59427 1.3 55 27 Op 3 3/0.586 - CDS 59448 - 60131 267 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 - Prom 60169 - 60228 5.0 - Term 60156 - 60189 2.3 56 28 Tu 1 . - CDS 60304 - 61092 847 ## COG0501 Zn-dependent protease with chaperone function - Prom 61175 - 61234 3.2 - Term 61162 - 61193 2.0 57 29 Op 1 6/0.138 - CDS 61237 - 62520 1280 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase - Term 62538 - 62571 4.1 58 29 Op 2 4/0.379 - CDS 62591 - 63679 1107 ## COG1932 Phosphoserine aminotransferase - Prom 63736 - 63795 3.3 59 30 Tu 1 . - CDS 63878 - 64570 726 ## COG2323 Predicted membrane protein + Prom 64527 - 64586 2.9 60 31 Tu 1 . + CDS 64700 - 66460 1993 ## COG1944 Uncharacterized conserved protein + Term 66470 - 66498 0.7 61 32 Op 1 7/0.103 + CDS 66866 - 67723 667 ## COG2116 Formate/nitrite family of transporters 62 32 Op 2 11/0.000 + CDS 67778 - 70060 2550 ## COG1882 Pyruvate-formate lyase + Term 70103 - 70134 3.2 63 32 Op 3 . + CDS 70252 - 70992 712 ## COG1180 Pyruvate-formate lyase-activating enzyme + Term 71000 - 71044 7.3 - Term 70894 - 70928 1.1 64 33 Tu 1 . - CDS 71074 - 71664 395 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 71689 - 71748 3.2 + Prom 71664 - 71723 2.6 65 34 Tu 1 . + CDS 71764 - 72672 435 ## COG0583 Transcriptional regulator - Term 72528 - 72559 -0.1 66 35 Tu 1 . - CDS 72673 - 74103 1481 ## COG0531 Amino acid transporters - Prom 74187 - 74246 8.8 - Term 74259 - 74302 8.5 67 36 Tu 1 . - CDS 74313 - 75461 928 ## COG0477 Permeases of the major facilitator superfamily - Prom 75491 - 75550 3.8 + Prom 75561 - 75620 4.4 68 37 Tu 1 . + CDS 75776 - 76402 635 ## COG1335 Amidases related to nicotinamidase + Term 76410 - 76439 1.1 - Term 76397 - 76427 2.1 69 38 Op 1 9/0.034 - CDS 76438 - 77301 863 ## COG3302 DMSO reductase anchor subunit 70 38 Op 2 16/0.000 - CDS 77303 - 77920 630 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 71 38 Op 3 2/0.690 - CDS 77931 - 80375 2352 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 80424 - 80483 4.6 - Term 80563 - 80588 -0.5 72 39 Op 1 8/0.034 - CDS 80614 - 81906 1569 ## COG0172 Seryl-tRNA synthetase - Term 81965 - 81996 -1.0 73 39 Op 2 8/0.034 - CDS 81997 - 83340 1157 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 74 39 Op 3 10/0.034 - CDS 83351 - 83962 651 ## COG2834 Outer membrane lipoprotein-sorting protein 75 40 Tu 1 . - CDS 84117 - 88184 3978 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 88236 - 88295 2.6 - Term 88219 - 88262 9.2 76 41 Tu 1 . - CDS 88319 - 88813 539 ## COG1522 Transcriptional regulators + Prom 89270 - 89329 5.8 77 42 Tu 1 . + CDS 89358 - 90323 733 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 90350 - 90394 8.0 + Prom 90351 - 90410 6.1 78 43 Op 1 14/0.000 + CDS 90446 - 92212 170 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 79 43 Op 2 5/0.241 + CDS 92213 - 93934 1593 ## COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components 80 43 Op 3 5/0.241 + CDS 93976 - 94680 389 ## COG2360 Leu/Phe-tRNA-protein transferase + Term 94869 - 94905 -1.0 + Prom 94870 - 94929 3.7 81 44 Tu 1 . + CDS 94965 - 95183 257 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 + Term 95220 - 95259 5.5 + TRNA 95437 - 95524 68.6 # Ser GGA 0 0 - Term 95800 - 95845 10.5 82 45 Op 1 19/0.000 - CDS 95868 - 98144 1361 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 83 45 Op 2 . - CDS 98175 - 98495 300 ## COG2127 Uncharacterized conserved protein - Prom 98561 - 98620 1.8 84 46 Tu 1 . - CDS 98665 - 98907 88 ## - Prom 98956 - 99015 2.2 + Prom 98671 - 98730 4.6 85 47 Tu 1 . + CDS 98818 - 99042 231 ## COG1278 Cold shock proteins + Term 99079 - 99112 4.1 - Term 99060 - 99105 7.1 86 48 Op 1 13/0.000 - CDS 99115 - 101061 364 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 87 48 Op 2 . - CDS 101058 - 102173 1262 ## COG0845 Membrane-fusion protein + Prom 102192 - 102251 3.2 88 49 Tu 1 . + CDS 102330 - 103280 654 ## COG2990 Uncharacterized protein conserved in bacteria + Term 103397 - 103438 0.2 - Term 103248 - 103276 -0.6 89 50 Tu 1 . - CDS 103277 - 104935 1182 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family - Prom 105106 - 105165 7.5 + Prom 105059 - 105118 8.2 90 51 Tu 1 . + CDS 105361 - 106056 812 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Prom 106368 - 106427 2.5 91 52 Tu 1 . + CDS 106511 - 107410 874 ## COG2431 Predicted membrane protein + Prom 107462 - 107521 4.8 92 53 Op 1 2/0.690 + CDS 107554 - 109206 2042 ## COG1151 6Fe-6S prismane cluster-containing protein 93 53 Op 2 5/0.241 + CDS 109218 - 110186 945 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 + Term 110196 - 110235 5.0 + Prom 110232 - 110291 5.3 94 54 Op 1 5/0.241 + CDS 110319 - 112037 1848 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 95 54 Op 2 4/0.379 + CDS 112074 - 113075 1197 ## COG2008 Threonine aldolase 96 54 Op 3 4/0.379 + CDS 113086 - 114516 1197 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases + Prom 114528 - 114587 3.0 97 54 Op 4 . + CDS 114615 - 115628 950 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Term 115451 - 115492 1.0 98 55 Op 1 4/0.379 - CDS 115625 - 116455 820 ## COG3023 Negative regulator of beta-lactamase expression 99 55 Op 2 . - CDS 116452 - 116775 521 ## COG0393 Uncharacterized conserved protein - Prom 116851 - 116910 6.2 + Prom 116801 - 116860 4.1 100 56 Tu 1 . + CDS 116901 - 117416 338 ## B21_00876 hypothetical protein + Term 117447 - 117487 5.6 + Prom 117477 - 117536 2.0 101 57 Op 1 7/0.103 + CDS 117562 - 118362 242 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 102 57 Op 2 12/0.000 + CDS 118380 - 119111 1078 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 103 57 Op 3 12/0.000 + CDS 119118 - 119834 856 ## COG4215 ABC-type arginine transport system, permease component 104 57 Op 4 4/0.379 + CDS 119834 - 120502 954 ## COG4160 ABC-type arginine/histidine transport system, permease component + Term 120642 - 120686 0.7 + Prom 120668 - 120727 9.4 105 58 Tu 1 . + CDS 120794 - 121525 879 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 121679 - 121710 2.5 106 59 Op 1 . - CDS 121700 - 122827 1087 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 107 59 Op 2 . - CDS 122868 - 123356 419 ## LF82_2664 inner membrane protein YbjO 108 59 Op 3 36/0.000 - CDS 123416 - 124261 774 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 109 59 Op 4 30/0.000 - CDS 124258 - 125211 973 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 110 59 Op 5 13/0.000 - CDS 125221 - 126354 1380 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 111 59 Op 6 . - CDS 126449 - 127561 1227 ## COG0687 Spermidine/putrescine-binding periplasmic protein - Prom 127729 - 127788 7.3 - Term 127850 - 127904 6.1 112 60 Op 1 . - CDS 127912 - 128388 462 ## EcE24377A_0925 TPR repeat-containing protein - Prom 128415 - 128474 1.6 113 60 Op 2 4/0.379 - CDS 128476 - 129378 1507 ## PROTEIN SUPPORTED gi|15830186|ref|NP_308959.1| ribosomal protein S6 modification protein - Prom 129410 - 129469 2.3 114 61 Op 1 . - CDS 129577 - 130161 634 ## COG0778 Nitroreductase 115 61 Op 2 . - CDS 130145 - 130432 219 ## ECO103_0894 hypothetical protein - Prom 130539 - 130598 4.8 + Prom 130509 - 130568 2.2 116 62 Tu 1 . + CDS 130592 - 130849 503 ## COG0695 Glutaredoxin and related proteins + Term 130861 - 130889 1.4 117 63 Tu 1 . - CDS 130879 - 131256 115 ## ECIAI39_0827 conserved hypothetical protein; putative inner membrane protein - Prom 131364 - 131423 4.2 + Prom 131349 - 131408 5.5 118 64 Tu 1 . + CDS 131526 - 133211 1673 ## COG2985 Predicted permease + Term 133321 - 133375 0.4 119 65 Op 1 . - CDS 133447 - 133665 124 ## B21_00857 hypothetical protein - Prom 133695 - 133754 4.0 120 65 Op 2 2/0.690 - CDS 133756 - 134856 906 ## COG3500 Phage protein D 121 65 Op 3 2/0.690 - CDS 134853 - 135338 526 ## COG3499 Phage protein U 122 65 Op 4 . - CDS 135335 - 136840 1296 ## COG5283 Phage-related tail protein - Term 136859 - 136893 3.2 123 66 Op 1 . - CDS 136906 - 137208 357 ## ECIAI39_1794 putative phage tail protein E 124 66 Op 2 6/0.138 - CDS 137263 - 137778 566 ## COG3498 Phage tail tube protein FII 125 66 Op 3 . - CDS 137788 - 138522 637 ## COG3497 Phage tail sheath protein FI 126 66 Op 4 . - CDS 138584 - 138739 74 ## COG4540 Phage P2 baseplate assembly protein gpV - Prom 138943 - 139002 7.1 127 67 Tu 1 . + CDS 138835 - 139701 382 ## SeD_A3038 hypothetical protein + Term 139814 - 139838 -1.0 - Term 139520 - 139564 -0.8 128 68 Tu 1 . - CDS 139728 - 140045 156 ## SeD_A3039 phage virion morphogenesis protein 129 69 Op 1 . - CDS 140167 - 140598 377 ## SeD_A3040 phage tail completion protein R 130 69 Op 2 . - CDS 140694 - 141122 217 ## ECED1_3080 putative regulatory protein 131 69 Op 3 . - CDS 141119 - 141496 312 ## ECIAI39_1807 hypothetical protein 132 69 Op 4 . - CDS 141498 - 142010 330 ## COG3772 Phage-related lysozyme (muraminidase) 133 69 Op 5 . - CDS 141991 - 142206 223 ## ECS88_2829 putative secretory protein 134 69 Op 6 . - CDS 142210 - 142413 217 ## COG5004 P2-like prophage tail protein X 135 69 Op 7 . - CDS 142413 - 142877 481 ## LF82_p400 capsid completion protein 136 69 Op 8 . - CDS 142973 - 143623 652 ## t3420 terminase, endonuclease subunit 137 69 Op 9 . - CDS 143627 - 144685 1279 ## SeD_A3048 phage major capsid protein, P2 family 138 69 Op 10 . - CDS 144702 - 145535 926 ## EcHS_A0925 phage capsid scaffolding protein + Prom 145503 - 145562 1.7 139 70 Op 1 . + CDS 145678 - 147444 1463 ## COG5484 Uncharacterized conserved protein 140 70 Op 2 . + CDS 147444 - 148466 724 ## COG5518 Bacteriophage capsid portal protein - Term 148455 - 148505 11.1 141 71 Tu 1 . - CDS 148515 - 149519 412 ## COG2357 Uncharacterized protein conserved in bacteria - Prom 149561 - 149620 4.7 + Prom 149956 - 150015 3.1 142 72 Tu 1 . + CDS 150035 - 150370 263 ## B21_00837 hypothetical protein - Term 150449 - 150492 6.7 143 73 Op 1 . - CDS 150563 - 150796 307 ## ECS88_2838 putative DinI-like damage-inducible protein 144 73 Op 2 . - CDS 150807 - 150995 122 ## ECS88_2839 hypothetical protein - Prom 151045 - 151104 4.8 - Term 151114 - 151144 -0.5 145 74 Op 1 . - CDS 151148 - 153562 1521 ## ECB_00825 putative replication protein for prophage 146 74 Op 2 1/0.828 - CDS 153559 - 154416 489 ## COG0338 Site-specific DNA methylase 147 74 Op 3 . - CDS 154413 - 154640 256 ## COG1734 DnaK suppressor protein 148 74 Op 4 . - CDS 154640 - 154873 354 ## t3407 hypothetical protein 149 74 Op 5 . - CDS 154941 - 155282 288 ## ECS88_2845 hypothetical protein 150 74 Op 6 . - CDS 155305 - 155529 157 ## ECS88_2846 hypothetical protein 151 74 Op 7 . - CDS 155400 - 155696 76 ## ECS88_2847 conserved hypothetical protein fil of phage origin 152 74 Op 8 . - CDS 155704 - 156213 484 ## c0936 hypothetical protein 153 74 Op 9 . - CDS 156278 - 156481 201 ## c0935 putative regulator for prophage - Prom 156564 - 156623 3.9 + Prom 156439 - 156498 3.5 154 75 Op 1 . + CDS 156540 - 157196 105 ## COG2932 Predicted transcriptional regulator 155 75 Op 2 . + CDS 157212 - 157403 59 ## ECBD_2774 hypothetical protein + Prom 157512 - 157571 3.8 156 76 Op 1 . + CDS 157592 - 158623 635 ## COG0582 Integrase 157 76 Op 2 . + CDS 158682 - 158951 169 ## EUBREC_0162 hypothetical protein - Term 158956 - 159014 2.0 158 77 Tu 1 . - CDS 159102 - 159638 477 ## COG3226 Uncharacterized protein conserved in bacteria - Prom 159700 - 159759 2.0 + Prom 159638 - 159697 2.4 159 78 Op 1 2/0.690 + CDS 159722 - 160930 1145 ## COG0477 Permeases of the major facilitator superfamily 160 78 Op 2 . + CDS 160930 - 161745 906 ## COG0561 Predicted hydrolases of the HAD superfamily 161 78 Op 3 . + CDS 161837 - 162115 233 ## ECO103_0887 hypothetical protein + Term 162121 - 162165 6.1 - Term 162112 - 162150 6.9 162 79 Tu 1 . - CDS 162156 - 163388 1303 ## COG0477 Permeases of the major facilitator superfamily - Prom 163491 - 163550 8.4 163 80 Op 1 4/0.379 + CDS 163673 - 164269 599 ## COG0671 Membrane-associated phospholipid phosphatase 164 80 Op 2 . + CDS 164327 - 165085 686 ## COG1349 Transcriptional regulators of sugar metabolism - Term 165084 - 165120 6.3 165 81 Tu 1 . - CDS 165132 - 166355 1285 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 166570 - 166629 4.2 + Prom 166333 - 166392 3.6 166 82 Tu 1 . + CDS 166580 - 167206 571 ## COG0625 Glutathione S-transferase 167 83 Tu 1 . - CDS 167203 - 168174 860 ## COG2133 Glucose/sorbosone dehydrogenases - Prom 168339 - 168398 4.4 - Term 168385 - 168424 5.0 168 84 Tu 1 . - CDS 168429 - 168812 226 ## EcE24377A_0907 biofilm formation regulatory protein BssR - Prom 168877 - 168936 4.5 + Prom 168931 - 168990 4.9 169 85 Tu 1 . + CDS 169025 - 170350 1844 ## PROTEIN SUPPORTED gi|183179613|ref|ZP_02957824.1| conserved hypothetical protein - Term 170343 - 170386 7.7 170 86 Op 1 6/0.138 - CDS 170397 - 171725 1004 ## COG2199 FOG: GGDEF domain 171 86 Op 2 3/0.586 - CDS 171733 - 174081 1518 ## COG2200 FOG: EAL domain - Prom 174161 - 174220 5.6 - Term 174150 - 174184 -1.0 172 87 Op 1 49/0.000 - CDS 174259 - 175128 864 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 173 87 Op 2 38/0.000 - CDS 175173 - 176093 938 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 174 87 Op 3 11/0.000 - CDS 176111 - 177649 1668 ## COG0747 ABC-type dipeptide transport system, periplasmic component 175 87 Op 4 3/0.586 - CDS 177669 - 179540 844 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 176 87 Op 5 . - CDS 179527 - 180492 1047 ## COG1446 Asparaginase - Prom 180560 - 180619 7.5 + Prom 180500 - 180559 2.9 177 88 Op 1 9/0.034 + CDS 180696 - 181931 1222 ## COG0303 Molybdopterin biosynthesis enzyme 178 88 Op 2 . + CDS 181931 - 182680 869 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 - Term 182693 - 182733 1.9 179 89 Tu 1 . - CDS 182768 - 183436 886 ## COG0176 Transaldolase - Prom 183521 - 183580 3.0 + Prom 183417 - 183476 3.6 180 90 Op 1 11/0.000 + CDS 183561 - 184460 963 ## COG1180 Pyruvate-formate lyase-activating enzyme 181 90 Op 2 2/0.690 + CDS 184466 - 186898 2864 ## COG1882 Pyruvate-formate lyase + Term 186904 - 186944 10.1 + Prom 186927 - 186986 3.8 182 91 Tu 1 . + CDS 187044 - 187859 880 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 187868 - 187898 2.6 + Prom 187908 - 187967 3.1 183 92 Tu 1 . + CDS 188011 - 189276 1087 ## B21_00805 hypothetical protein + Term 189353 - 189390 0.1 Predicted protein(s) >gi|299856444|gb|ADWV01000007.1| GENE 1 381 - 1625 1496 414 aa, chain + ## HITS:1 COG:ECs3971 KEGG:ns NR:ns ## COG: ECs3971 COG3633 # Protein_GI_number: 15833225 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Escherichia coli O157:H7 # 1 414 1 414 414 700 100.0 0 MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVGLLGTLFVGALKAVAPI LVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVFSFAFPSTLHLSSSAGDIS PPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLGFALRHGNETTKNLVNDMSNA VTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQLLVVLVGCMLLVALVVNPLLVWW KIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINM AGAAITITVLTLAAVNTLGIPVDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMFG ISNDIAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAACQAEDDRLANSALRN >gi|299856444|gb|ADWV01000007.1| GENE 2 1630 - 2181 325 183 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3504 NR:ns ## KEGG: EC55989_3504 # Name: ygjV # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.coli_55989 # Pathway: not_defined # 1 183 1 183 183 352 100.0 4e-96 MTAYWLAQGVGVIAFLIGITTFFNRDERRFKKQLSVYSAVIGVHFFLLGTYPAGASAILN AIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIGTIVSTWALFRCKGLTMRC VMWFSTCCWVIHNFWAGSIGGTMIEVSFLLMNGLNIIRFWRMQKRGIDPFKVEKTPPAVD ERG >gi|299856444|gb|ADWV01000007.1| GENE 3 2264 - 3751 1551 495 aa, chain - ## HITS:1 COG:uxaA KEGG:ns NR:ns ## COG: uxaA COG2721 # Protein_GI_number: 16130986 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Escherichia coli K12 # 1 495 1 495 495 1018 99.0 0 MQYIKIHALDNVAVALADLAEGTEVSVDNQTVTLRQDVARGHKFALTDIAKGANVIKYGL PIGYALADIAAGEHVHAHNTRTNLSDLDQYRYQPDFQDLPAQAADREVQIYRRANGDVGV RNELWILPTVGCVNGIARQIQNRFLKETNNAEGTDGVFLFSHTYGCSQLGDDHINTRTML QNMVRHPNAGAVLVIGLGCENNQVAAFRETLGDIDPERVHFMICQQQDDEIEAGIEHLHQ LYNVMRNDKREPGKLSELKFGLECGGSDGLSGITANPMLGRFSDYVIANGGTTVLTEVPE MFGAEQLLMDHCRDEATFEKLVTMVNDFKQYFIAHDQPIYENPSPGNKAGGITTLEDKSL GCTQKAGSSVVVDVLRYGERLKTPGLNLLSAPGNDAVATSALAGAGCHMVLFSTGRGTPY GGFVPTVKIATNSELAAKKKHWIDFDAGQLIHGKAMPQLLEEFIDTIVVFANGKQTCNER NDFRELAIFKSGVTL >gi|299856444|gb|ADWV01000007.1| GENE 4 3766 - 5178 1885 470 aa, chain - ## HITS:1 COG:uxaC KEGG:ns NR:ns ## COG: uxaC COG1904 # Protein_GI_number: 16130987 # Func_class: G Carbohydrate transport and metabolism # Function: Glucuronate isomerase # Organism: Escherichia coli K12 # 1 470 1 470 470 991 99.0 0 MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAEDYRFKNLYDIWLKGDHY KWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLS PSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDPIDSLEHHAEIAKDGSFTIKV LPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADLQTALTKRLDHFAAHGCKVSDHA LDVVMFAEANEAELDSILARRLAGEPLSEHEVAQFKTAVLVFLGAEYARRGWVQQYHIGA LRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLLSKQNEENLLPKTILYCLNPRDNEVLG TMIGNFQGEGMPGKMQFGSGWWFNDQKDGMERQMTQLAQLGLLSRFVGMLTDSRSFLSYT RHEYFRRILCQMIGRWVEAGEAPADINLLGEMVKNICFNNARDYFAIELN >gi|299856444|gb|ADWV01000007.1| GENE 5 5660 - 6958 1719 432 aa, chain + ## HITS:1 COG:ECs3975 KEGG:ns NR:ns ## COG: ECs3975 COG0477 # Protein_GI_number: 15833229 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 432 41 472 472 788 99.0 0 MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNISTQQYSYIIAAYSAAYTV MQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSWGGLAIARGAVGAAEAAMIPAGL KASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVMHSWQMAFIISGALSFIWAMA WLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKMSVGQILRNRQFWGIALPRFLAE PAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFADLGCILGGYLPPLFQRWFGVNLIV SRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCIGGFAHQALSGALITLSSDVFGRNEVA TANGLTGMSAWLASTLFALVVGALADTIGFSPLFAVLAVFDLLGALVIWTVLQNKPAIEV AQETHNDPAPQH >gi|299856444|gb|ADWV01000007.1| GENE 6 7046 - 8134 557 362 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3839 NR:ns ## KEGG: ECO103_3839 # Name: not_defined # Def: putative minor pilin and initiator protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 362 1 362 362 758 100.0 0 MRNRLIAAILGLFGTLTGVQAAPDVTSEITYDLASGRADYYFWKDEASAGNNGYMWYECS YPDLQQTCTANGNISTVQIYLTEQRSGMRWPVKLKGFKTAIVSSDEAPPGCKGGKGLQTN LKDSNRSSCTEDGQHYYIYDTKFLTLYLEQTEMKNLPIGGVWKGKVKLHSNSPAQDYFAN ITLNTLDPNHIDVFFPEFAHATPRVQLDLHPTGSVNGSNYAQDLTMLDMCLYDGFNGNAI SYEIMLKDEGRPAAGRRDGYFSIYRQGGTTTDEGERIDYRVKMYNPETGGQIDVRNNENM VWNSINLKRVRPVVLPGIRYAVMCVPTPLTLAVDKFSVMDKQAGYYMGKLSVIFTPSLPT IN >gi|299856444|gb|ADWV01000007.1| GENE 7 8131 - 10833 1740 900 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3509 NR:ns ## KEGG: EC55989_3509 # Name: not_defined # Def: conserved hypothetical protein; putative exported protein # Organism: E.coli_55989 # Pathway: not_defined # 1 900 1 900 900 1686 100.0 0 MDFRIAMDKKLLALLILASLSPAEATLTKIPAGFEVIAQGQQEYIEVYFSGKSLGKYYAM VNLDTVTFLDPASLYNKLELDVDDQKIAHIVKEKLSQPLARHGELACGYVRTDSGCGFLN TDTLEIIYNDEESSATLFINPQWNSAFDAKSLYLNPDKNTVNAFIHQQDINVLAQDDYQS LSIQGNGALGITENSYIGAHWNFNGYDADDVSDSNADVSDLYYRYDFLRRYYVQAGRMDN RTLFNAQGGNFTFNFLPLGAIDGMRIGSTLSYLNQAQSQQGTPVMVLLSRNSRVDAYRNE QLLGSFYLNSGSQFIDTSSFPPGSYSVALKVYENNQLTRTELVPFTKTGGLTDGNAQWFL QAGKTTSQVSDDESSAYQLGVRLPLHPQYELYAGLANADDVSAFELGNNWTADLGGVGNL AISASVFRNDDGGKGDMQQANWSNPGWPTLGFYRTNSDGDACTTDSRESYNALSCYESIS ATVSQNFVGWNMMLGYTRTQNNTDDSLRWDKQQSFENNYLRQTTAQSISETVQLSASRAF VMRDWILSTSVGVFHRNDNGGDNDDNGLYLSFSLSDTPTMDSNNNSHSTNVSTDYRYSEQ DGDQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDGQYGNVYATVSDSYDR KNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKGFSEQDEESQDLQLEAR VAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTNIINGAGNRELMLLPGKLR YREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAEDGGFTLEINGSEKELYLLSGQ QFLKCPLSVVKKRASIRYSGDVTCSVVTYSQLPESIQVQAQLKQPKLRGNVQTAQREVAP >gi|299856444|gb|ADWV01000007.1| GENE 8 10907 - 11407 583 166 aa, chain - ## HITS:1 COG:no KEGG:ECO103_3841 NR:ns ## KEGG: ECO103_3841 # Name: not_defined # Def: putative fimbrial subunit # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 166 1 166 166 259 100.0 3e-68 MKKVFAKSLLVAAMFSVAGSALAVQKDITVTANVDAALDMTQTDNTALPKAVEMQYLPGQ GLQSYQLMTKIWSNDVTKDVKMQLVSPAQLVQSLDASKIVPLTVTWGGEEIKADAATTFT ATKIFASDALTNGSLAKNLMFAQTTKGVLETGIYRGVVSIYLSQDI >gi|299856444|gb|ADWV01000007.1| GENE 9 11437 - 12060 378 207 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3511 NR:ns ## KEGG: EC55989_3511 # Name: not_defined # Def: putative fimbrial protein # Organism: E.coli_55989 # Pathway: not_defined # 1 207 32 238 238 382 99.0 1e-105 MAVSINSQGEGNVRVISKSNEVQYIKATVFRIDNPSMPQENEVEIKSGDANHLVVMPPKF ALPAGSSKTVRFVAMEPEQKEKNYRVKFEAVPSIDDVATDKKDLSMQLTVNLIWGIVVSV PPQQPIAKLEVNAAQKLVNAGNQRLKILTIAYCKNNSKENCKIQTVNKNIFPGQERNLES ISGYDKIVVKYNNWITKDNGEFELAVH >gi|299856444|gb|ADWV01000007.1| GENE 10 12449 - 13225 990 258 aa, chain + ## HITS:1 COG:ECs3976 KEGG:ns NR:ns ## COG: ECs3976 COG2186 # Protein_GI_number: 15833230 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 258 6 263 263 498 100.0 1e-141 MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEG YVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQLIESNIAEFAATQVTKQD IMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALAAIVEKMWTQRSHNPYWKKLH EHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHLENTKIMLFNETSDDFEFNADRY LFAENPVVHLDTATSGSK >gi|299856444|gb|ADWV01000007.1| GENE 11 13570 - 14232 535 220 aa, chain + ## HITS:1 COG:STM3226 KEGG:ns NR:ns ## COG: STM3226 COG0586 # Protein_GI_number: 16766525 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 220 1 220 220 372 95.0 1e-103 MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLPAAFLPGDSLLVLVGVL IAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNWLSHLPAHYHQRAHHLFHK HGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMSGLLWVLILTTLGYMLGKTPV FLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGNRG >gi|299856444|gb|ADWV01000007.1| GENE 12 14251 - 14619 264 122 aa, chain + ## HITS:1 COG:no KEGG:JW3067 NR:ns ## KEGG: JW3067 # Name: yqjB # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 122 6 127 127 208 99.0 6e-53 MSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIP FKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHR FG >gi|299856444|gb|ADWV01000007.1| GENE 13 14751 - 15134 488 127 aa, chain + ## HITS:1 COG:no KEGG:SSON_3256 NR:ns ## KEGG: SSON_3256 # Name: yqjC # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 127 1 127 127 162 100.0 4e-39 MEGSRMKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQNRIDGLNKALS EVRANCSDSQLRADHHKKIAKQKDEVAERQQDLAEAKQKGDADKIAKRERKLAEAQEELK KLEARDY >gi|299856444|gb|ADWV01000007.1| GENE 14 15172 - 15477 454 101 aa, chain + ## HITS:1 COG:ECs3980 KEGG:ns NR:ns ## COG: ECs3980 COG4575 # Protein_GI_number: 15833234 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 101 1 101 101 150 100.0 4e-37 MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDA IAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR >gi|299856444|gb|ADWV01000007.1| GENE 15 15480 - 15884 442 134 aa, chain + ## HITS:1 COG:STM3230 KEGG:ns NR:ns ## COG: STM3230 COG5393 # Protein_GI_number: 16766529 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 130 1 130 132 198 89.0 2e-51 MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLF AAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIWTLRKSRKSTLLRHTRHEL ANDRQLLEEESREQ >gi|299856444|gb|ADWV01000007.1| GENE 16 15874 - 16173 408 99 aa, chain + ## HITS:1 COG:no KEGG:ECSP_4074 NR:ns ## KEGG: ECSP_4074 # Name: yqjK # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 99 1 99 99 140 100.0 1e-32 MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWNMLLSLRSWALVGSSVM AIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG >gi|299856444|gb|ADWV01000007.1| GENE 17 16269 - 16751 509 160 aa, chain + ## HITS:1 COG:ECs3983 KEGG:ns NR:ns ## COG: ECs3983 COG2259 # Protein_GI_number: 15833237 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 160 1 160 160 273 98.0 9e-74 MILSIDSNDANTAPLHKKTISSLSGAVESMMKKLEDVGVLVARILMPILFITAGWGKITA YSGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNF AEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW >gi|299856444|gb|ADWV01000007.1| GENE 18 16821 - 17807 1025 328 aa, chain + ## HITS:1 COG:yqjG KEGG:ns NR:ns ## COG: yqjG COG0435 # Protein_GI_number: 16130997 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted glutathione S-transferase # Organism: Escherichia coli K12 # 1 328 1 328 328 658 99.0 0 MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVS LACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQHEFLYQLY LHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKID ELNGWIYDTVNNGVYKAGFATSQQAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADI RLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSH KTINPTGIISIGPWQDLDEPHGRDVRFG >gi|299856444|gb|ADWV01000007.1| GENE 19 18100 - 18465 341 121 aa, chain + ## HITS:1 COG:ECs3985 KEGG:ns NR:ns ## COG: ECs3985 COG3152 # Protein_GI_number: 15833239 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 121 1 121 121 223 100.0 5e-59 MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYG ILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLE P >gi|299856444|gb|ADWV01000007.1| GENE 20 18707 - 19063 382 118 aa, chain + ## HITS:1 COG:ECs3986 KEGG:ns NR:ns ## COG: ECs3986 COG3152 # Protein_GI_number: 15833240 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 118 1 118 118 197 84.0 3e-51 MQWYLAVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLEFPFLSLIYLAATI IPVIALCVRRLHDTDRSGAWALLYLVPIIGWLVLFVFACLEGNSGSNRYGNDPKFGSN >gi|299856444|gb|ADWV01000007.1| GENE 21 19114 - 20010 1048 298 aa, chain - ## HITS:1 COG:ECs3987 KEGG:ns NR:ns ## COG: ECs3987 COG0583 # Protein_GI_number: 15833241 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 298 1 298 298 550 99.0 1e-156 MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHR TKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLA AKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDH PIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLG VATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFSGK >gi|299856444|gb|ADWV01000007.1| GENE 22 20115 - 20816 587 233 aa, chain + ## HITS:1 COG:yhaK KEGG:ns NR:ns ## COG: yhaK COG1741 # Protein_GI_number: 16131001 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Escherichia coli K12 # 1 233 1 233 233 471 99.0 1e-133 MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLNQEVLAPGAAFQPRTYP KVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLD ACPQRENPLIQKLALNMGKQQLIASPEGTVGSLQLRQQVWLHHIVLDKGESANFQLHGPR AYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITLVADSPLRALLIDLPV >gi|299856444|gb|ADWV01000007.1| GENE 23 20839 - 21003 217 54 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3525 NR:ns ## KEGG: EC55989_3525 # Name: yhaL # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 54 1 54 54 65 98.0 7e-10 MSKKLAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAETRLAEDEATA >gi|299856444|gb|ADWV01000007.1| GENE 24 21215 - 22525 1225 436 aa, chain - ## HITS:1 COG:yhaN+M KEGG:ns NR:ns ## COG: yhaN+M COG3681 # Protein_GI_number: 16132252 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 436 1 436 436 749 99.0 0 MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAELEGPVERVEAWVSPNLM KNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQAIADAKALLAAGKVSVKI QEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNGVVFTQQACVAEGEQESPLTV LSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEGLSGKWGLHIGATLEKQCERGLL AKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQGITATMPVVVVAEHFGADDERLAR ALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAAGMAWLVDGRYETISMAISSMIGDVSG MICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHDVEQSIANLCALASHSM QQTDRQIIEIMASKAR >gi|299856444|gb|ADWV01000007.1| GENE 25 22553 - 23884 1290 443 aa, chain - ## HITS:1 COG:ECs3991 KEGG:ns NR:ns ## COG: ECs3991 COG0814 # Protein_GI_number: 15833245 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 443 1 443 443 788 99.0 0 MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQV GLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYF VMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKI STGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSP MVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISA LAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKI NENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYK GMSLYLIIVTGLLLCVSPFLAFS >gi|299856444|gb|ADWV01000007.1| GENE 26 24159 - 25523 1221 454 aa, chain - ## HITS:1 COG:Z4464 KEGG:ns NR:ns ## COG: Z4464 COG1760 # Protein_GI_number: 15803651 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli O157:H7 EDL933 # 1 454 3 456 456 899 99.0 0 MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGH ATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEML PRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKM CDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRA VALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYY DKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGG SPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVS LDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG >gi|299856444|gb|ADWV01000007.1| GENE 27 25595 - 25984 436 129 aa, chain - ## HITS:1 COG:tdcF KEGG:ns NR:ns ## COG: tdcF COG0251 # Protein_GI_number: 16131006 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 129 22 150 150 249 100.0 1e-66 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAI VVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLE IEAIAVRSA >gi|299856444|gb|ADWV01000007.1| GENE 28 25998 - 28292 2612 764 aa, chain - ## HITS:1 COG:ECs3994 KEGG:ns NR:ns ## COG: ECs3994 COG1882 # Protein_GI_number: 15833248 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli O157:H7 # 1 764 1 764 764 1582 99.0 0 MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGDESFLAEATPATTELWE KVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIVGLQTDAPLKRALHPFGGI NMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRG RIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDLEATIRLREELAEHRHALLQIQE MAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFKAGV LNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFR YLHTLHTMGPAPEPNLTILWSEELPIAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYA IACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLMDDVLDYDKV MDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATDS LSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERFMKKIKALPTYR NAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLP FTYAKDGISYTFSIVPAALGKEDPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREML LDAIEHPEKYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAL >gi|299856444|gb|ADWV01000007.1| GENE 29 28326 - 29534 1105 402 aa, chain - ## HITS:1 COG:tdcD KEGG:ns NR:ns ## COG: tdcD COG0282 # Protein_GI_number: 16131008 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Escherichia coli K12 # 1 402 5 406 406 789 99.0 0 MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAFLSVNGGEPAPLAHHSY EGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNY ANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLPWKYYEELGVRRYGFHGTSHR YVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDV DFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERAQLAIKTF VHRIARHIAGHAASLRRLDGIIFTGGIGENSSLIRRLVMEHLAVLGVEIDTEMNNRSNSC GERIVSSENARVICAVIPTNEEKMIALDAIHLGKVNAPAEFA >gi|299856444|gb|ADWV01000007.1| GENE 30 29560 - 30891 1436 443 aa, chain - ## HITS:1 COG:ECs3996 KEGG:ns NR:ns ## COG: ECs3996 COG0814 # Protein_GI_number: 15833250 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 443 1 443 443 794 99.0 0 MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAY PIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTIT NTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISL SLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYE KDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANH FASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLILKFGYKGDKTKVSL GKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRG RLDNVFVTVIGLLTILNIVYKLF >gi|299856444|gb|ADWV01000007.1| GENE 31 30913 - 31902 983 329 aa, chain - ## HITS:1 COG:ECs3997 KEGG:ns NR:ns ## COG: ECs3997 COG1171 # Protein_GI_number: 15833251 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 590 100.0 1e-169 MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIR GAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDY SAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVI VPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDV SRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDQY IQNRKTVSIISGGNIDLSRVSQITGFVDA >gi|299856444|gb|ADWV01000007.1| GENE 32 32001 - 32939 717 312 aa, chain - ## HITS:1 COG:ECs3998 KEGG:ns NR:ns ## COG: ECs3998 COG0583 # Protein_GI_number: 15833252 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 593 100.0 1e-169 MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTG VTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFGFPSLIGFTFMSGMINKFK EVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVASKS RTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNA DFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSY NGCRRRQLIEVG >gi|299856444|gb|ADWV01000007.1| GENE 33 33128 - 33472 65 114 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3536 NR:ns ## KEGG: EC55989_3536 # Name: tdcR # Def: DNA-binding transcriptional activator TdcR # Organism: E.coli_55989 # Pathway: not_defined # 1 114 5 118 118 207 100.0 1e-52 MTGITIFYGDNIIRYVVNIKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINT AARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP >gi|299856444|gb|ADWV01000007.1| GENE 34 33728 - 34267 46 179 aa, chain + ## HITS:1 COG:no KEGG:ECSE_3404 NR:ns ## KEGG: ECSE_3404 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 179 8 186 186 363 100.0 1e-99 MKGFPIAHIFHPSIPPMHAVVNNHNRNIDYWTVKRKFAEIVSTNDVNKIYSISNELRRVL SAITALNFYQGDVPSVMIRIQPENMSPFIIDISTGEHDDYIIQTLDVGTFAPFGEQCTCS AVNKKELECIKETISKYCAKFTRKEAILTPLVHFNKTSITSDCWQILFFSPDHFNNDFY >gi|299856444|gb|ADWV01000007.1| GENE 35 34289 - 35476 306 395 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_3270 NR:ns ## KEGG: ECIAI1_3270 # Name: yhaC # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 395 1 395 395 705 100.0 0 MFPVSSIGNDISSDLVRRKMNDIPESPTGNNLEALAPGIEKLKQTSIEMVTLLNTLQPGG KCIITGDFQKELAYLQNVILYNDSSLRLDFLGYNAQIIQRSDNTCELTINEPLKNQKIST GSINVNCPLKYIYNEIRRLNVIFSCGTGDIVDLSSLDLRNVDLDYYDFTDKHMANTILNP FKLNSTNFTNANMFQVNFVSSTQNATISWDYLLKITPVLTSISDMYSEEKIKFVESCLNE LGDITEEQLKIMRFAIIKSIPRATLTDKLENELTKEIYKSSSKINNCLNRIKLPEMIDFS SEKIHDYIDIIIEDYENIKENAYLVIPQINYTMDLNIEDSSSEELLSDNTLEKDENSPDN GFEVGEYNTYEAYNSENQYFTREDYTYNYDLLNAI >gi|299856444|gb|ADWV01000007.1| GENE 36 35814 - 36794 813 326 aa, chain + ## HITS:1 COG:NMB1750 KEGG:ns NR:ns ## COG: NMB1750 COG3547 # Protein_GI_number: 15677594 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Neisseria meningitidis MC58 # 7 321 2 315 316 207 38.0 3e-53 MEHELHYIGIDTAKEKLDVDVLRPDGRHRTKKFANTTKGHDELVSWLKGHKIDHAHICIE ATGTYMEPVAECLYDAGYIVSVINPALGKAFAQSEGLRNKTDTVDARMLAEFCRQKRPAA WEAPHPLERALRALVVRHQALTDMHTQELNRTETAREVQRPSIDAHLLWLEAELKRLEKQ IKDLTDDDPDMKHRRKLLESIPGIGEKTSAVLLAYIGLKDRFAHARQFAAFAGLTPRRYE SGSSVRGASRMSKAGHVSLRRALYMPAMVATSKTEWGRAFRDRLAANGKKGKVILGAMMR KLAQVAYGVLKSGVPFDASRHNPVAA >gi|299856444|gb|ADWV01000007.1| GENE 37 37036 - 37683 622 215 aa, chain - ## HITS:1 COG:ycbL KEGG:ns NR:ns ## COG: ycbL COG0491 # Protein_GI_number: 16128894 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Escherichia coli K12 # 1 215 1 215 215 446 99.0 1e-125 MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDDSGLTLMQILLTHGHLD HVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEECQPLTPDRWLNEGDTISIG NVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGRSDFPRGDHNQLISSIKDKLL PLGDDVTFIPGHGPLSTLGYERLHNPFLQDEMPVW >gi|299856444|gb|ADWV01000007.1| GENE 38 37710 - 38258 412 182 aa, chain - ## HITS:1 COG:ECs1009 KEGG:ns NR:ns ## COG: ECs1009 COG3108 # Protein_GI_number: 15830263 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 182 1 182 182 358 99.0 2e-99 MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRG YIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNEL RARSPGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPAR HW >gi|299856444|gb|ADWV01000007.1| GENE 39 38439 - 40286 1311 615 aa, chain - ## HITS:1 COG:ycbB KEGG:ns NR:ns ## COG: ycbB COG2989 # Protein_GI_number: 16128892 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 615 1 615 615 1189 99.0 0 MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAVSEQGEALPQAQATAIM AGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL AEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFIANIPVKGTRWLYSSKP YALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLSDTKPWPQLTGK ATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMD KQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLA LNIQRLRLLPTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVV VNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLP FRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANM LLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPA RSSSQIVSKAEQLIR >gi|299856444|gb|ADWV01000007.1| GENE 40 40547 - 45007 6115 1486 aa, chain - ## HITS:1 COG:mukB KEGG:ns NR:ns ## COG: mukB COG3096 # Protein_GI_number: 16128891 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli K12 # 1 1486 1 1486 1486 2525 99.0 0 MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHF RNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVVGVRLQQVAGRDRKVDIKP FAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAMEGVQFKQFNSITDYHSLMFD LGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLRDYLLPENSGVRKAFQDMEAALR ENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMRHANERRVHLDKALEFRRELHTSRQ QLAAEQYKHVDMARELAEHNGAEGDLEADYQAASDHLNLVQTALRQQEKIERYEADLDEL QIRLEEQNEVVAEAIERQEENEARAEAAELEVDELKSQLADYQQALDVQQTRAIQYNQAI AALNRAKELCHLPDLTADCAAEWLETFQAKELEATEKMLSLEQKMSMAQTAHSQFEQAYQ LVVAINGPLARNEAWDVARELLREGVDQRHLAEQVQPLRMRLSELEQRLREQQEAERLLA DFCKRQGKNFDIDELEALHQELEARIASLSDSVSNAREERMALRQEQEQLQSRIQSLMQR APVWLAAQNSLNQLSEQCGEEFTSSQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEI ERLSQPGGSEDQRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQV TEHLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGR AARESRIESLHAEREVLSERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQ LNSRRVELERALSNHENDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRE RLDEAQEAARFVQQFGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFAL TEVVQRRAHFSYSDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQV LASLKSSYDTKKELLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEK ALTFCEAEMDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAY LSADDLRSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQ DIIRTDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQ GLQNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVM VVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPENISP EKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGSDEAPSQAS >gi|299856444|gb|ADWV01000007.1| GENE 41 45007 - 45711 788 234 aa, chain - ## HITS:1 COG:ECs1006 KEGG:ns NR:ns ## COG: ECs1006 COG3095 # Protein_GI_number: 15830260 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 444 99.0 1e-124 MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNHAFLMDFQEYLEEFYAR YNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLANEGIFTQQEL YDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLNRLRRLGMVWFMGHDSSKFRI TESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQLNDETEENQPDSGEEE >gi|299856444|gb|ADWV01000007.1| GENE 42 45692 - 47014 1557 440 aa, chain - ## HITS:1 COG:mukF KEGG:ns NR:ns ## COG: mukF COG3006 # Protein_GI_number: 16128889 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in chromosome partitioning # Organism: Escherichia coli K12 # 1 440 1 440 440 832 100.0 0 MSEFSQTVPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLDGEMSEGELVDAFRHVS DAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYRLTPLGIGITDYYIRQREF STLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRLMDE QQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDAT MTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHVHKFIRTAIDMDKNRVFAQR LRQSVQTYFDEPWALTYANADRLLDMRDEEMALRDEEVTGELPEDLEYEEFNEIREQLAA IIEEQLAVYKTRQVPLDLGLVVREYLSQYPRARHFDVARIVIDQAVRLGVAQADFTGLPA KWQPINDYGAKVQAHVIDKY >gi|299856444|gb|ADWV01000007.1| GENE 43 47011 - 47796 730 261 aa, chain - ## HITS:1 COG:smtA KEGG:ns NR:ns ## COG: smtA COG0500 # Protein_GI_number: 16128888 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 261 1 261 261 539 100.0 1e-153 MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAI KMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA VLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTL SPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEP YITLGRYIHVTARKPQSKDKV >gi|299856444|gb|ADWV01000007.1| GENE 44 47932 - 48711 664 259 aa, chain + ## HITS:1 COG:ECs1003 KEGG:ns NR:ns ## COG: ECs1003 COG1434 # Protein_GI_number: 15830257 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 449 99.0 1e-126 MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFISIGWLALLLLSLQPVAD RLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENP GSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIGDAP FLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYE TLGRIWQWLKGPSGEPRQE >gi|299856444|gb|ADWV01000007.1| GENE 45 48688 - 49581 709 297 aa, chain - ## HITS:1 COG:no KEGG:JW0902 NR:ns ## KEGG: JW0902 # Name: ycbJ # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 297 1 297 297 588 100.0 1e-166 MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLMARSFSTPGKARQLAWK TTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEAPARTPERWEQLKDQIVEA LLAWHRQDSRGCVGAVDNTQENFWPSWYRQHVEVLWTTLNQFNNTGLTMQDKRILFRTRE CLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMVGPGLMLWAPREYELFRLMDNSL AEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVNTGRFSRRNFDLASKSLLPWLA >gi|299856444|gb|ADWV01000007.1| GENE 46 49735 - 50481 833 248 aa, chain - ## HITS:1 COG:kdsB KEGG:ns NR:ns ## COG: kdsB COG1212 # Protein_GI_number: 16128885 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Escherichia coli K12 # 1 248 1 248 248 487 99.0 1e-137 MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGADRIIVATDHEDVARAVEA AGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQ VGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLR HLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL ERVRAEMR >gi|299856444|gb|ADWV01000007.1| GENE 47 50478 - 50660 180 60 aa, chain - ## HITS:1 COG:ECs1000 KEGG:ns NR:ns ## COG: ECs1000 COG2835 # Protein_GI_number: 15830254 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 60 1 60 60 119 100.0 2e-27 MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESKS >gi|299856444|gb|ADWV01000007.1| GENE 48 50712 - 51944 809 410 aa, chain - ## HITS:1 COG:ycaQ KEGG:ns NR:ns ## COG: ycaQ COG3214 # Protein_GI_number: 16128883 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 410 1 410 410 808 99.0 0 MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLLQIDTINIVARSPYLVL FSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRHRMLAPEKMGWKYKDAWMQ EHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPHKRHLEGLFTAGKVMVIERRN FQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARSLGIFREQWLADYYRLKRPALAA WREARAEQQQIIAVHVEKLGNLWLHADLLPLLERALAGKLTATHSAVLSPFDPVVWDRKR AEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQLVGRMDAKMHRQTGILEVISLWLQEG IKPTTMLQKGLRQAITDFASWQQATRVTLGRCPQGLFTDCRTGWEIDPVA >gi|299856444|gb|ADWV01000007.1| GENE 49 51981 - 52967 600 328 aa, chain - ## HITS:1 COG:ECs0998 KEGG:ns NR:ns ## COG: ECs0998 COG1663 # Protein_GI_number: 15830252 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Escherichia coli O157:H7 # 1 328 1 328 328 648 99.0 0 MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRAPVPVVVVGNLTAGGNG KTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTTTAQAGDEPVLIYQRTDAP VAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVEIVVIDGVRRFGNGWWLPAGP MRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNLRTGTRCDVAQLEHVVAMAGIGH PPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALVSTGQTLVMTEKDAVKCRAFAEENW WYLPVDAQLSGDEPAKLLTQLTSLASGN >gi|299856444|gb|ADWV01000007.1| GENE 50 52964 - 54712 242 582 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 359 568 17 229 245 97 32 3e-19 MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKTD RSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQS TGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILIVLAPIVSI AIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQ GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKS LTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVIERATGDVEFRNVTFTYPGRDVPALR NINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDGHDLREYTLASLRNQVA LVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVL LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS TIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQFGQ >gi|299856444|gb|ADWV01000007.1| GENE 51 54749 - 57013 705 754 aa, chain - ## HITS:1 COG:ycaI_1 KEGG:ns NR:ns ## COG: ycaI_1 COG0658 # Protein_GI_number: 16128880 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Escherichia coli K12 # 1 428 27 454 454 778 99.0 0 MKITTVGVCIICGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWG ILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQGRRIFPAPGLVLYGEYLP QAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQY LASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAA GLIRSGQIFLPGRWIHWQIPLIGGICCAAFYAWLTGMQPPALRTVVALATWGMLKLSGRQ WSGWDVWICCLAAILLMDPVAILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVS LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLIL EQGLWFLADRSLALLFWGLKSLPEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCV AVGLLMCWPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLII PWLHWHNLEPEGVILSHEHLDHRGGLDSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQG LRFSVHWPLQASNDKGNNHSCVVKVDDGTNSILLTGDIEVPAEQKMLSRYWQQVQTTLLQ VPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQQQGYQWLDTPHQGQV TVNFSAQGWRISSLREQILPRWYHQWFGVPVDNG >gi|299856444|gb|ADWV01000007.1| GENE 52 57220 - 57504 328 94 aa, chain - ## HITS:1 COG:ECs0995 KEGG:ns NR:ns ## COG: ECs0995 COG0776 # Protein_GI_number: 15830249 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Escherichia coli O157:H7 # 1 94 1 94 94 174 100.0 4e-44 MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG >gi|299856444|gb|ADWV01000007.1| GENE 53 57624 - 57722 150 32 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238903721|ref|ZP_04649193.1| ribosomal protein S1 [Escherichia coli BL21(DE3)] # 4 32 542 570 570 62 100 0.0 MQTSPTTQWLKLSKQLKASNSLTLRDFYSEVC >gi|299856444|gb|ADWV01000007.1| GENE 54 57664 - 59337 2807 557 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15800772|ref|NP_286786.1| 30S ribosomal protein S1 [Escherichia coli O157:H7 EDL933] # 1 557 1 557 557 1085 100 0.0 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA NFSNNAMAEAFKAAKGE >gi|299856444|gb|ADWV01000007.1| GENE 55 59448 - 60131 267 227 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 7 223 36 286 863 107 30 4e-22 MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDAL VPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAF RELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKE RDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQKLALA >gi|299856444|gb|ADWV01000007.1| GENE 56 60304 - 61092 847 262 aa, chain - ## HITS:1 COG:ECs0992 KEGG:ns NR:ns ## COG: ECs0992 COG0501 # Protein_GI_number: 15830246 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 459 99.0 1e-129 MINQRMIHMKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAI ANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGC VRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDAISATSGVASQLS RSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFEKLASLDGGRTQSM FDSHPPSTERAQHIRDRIASGK >gi|299856444|gb|ADWV01000007.1| GENE 57 61237 - 62520 1280 427 aa, chain - ## HITS:1 COG:ECs0991 KEGG:ns NR:ns ## COG: ECs0991 COG0128 # Protein_GI_number: 15830245 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 427 1 427 427 846 100.0 0 MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTAL GVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPLAAALCLGSNDIVLTGEPR MKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSSQFLTALLMTA PLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVE GDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTRGE LNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVE EGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQL ARISQAA >gi|299856444|gb|ADWV01000007.1| GENE 58 62591 - 63679 1107 362 aa, chain - ## HITS:1 COG:ECs0990 KEGG:ns NR:ns ## COG: ECs0990 COG1932 # Protein_GI_number: 15830244 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Escherichia coli O157:H7 # 1 362 1 362 362 749 99.0 0 MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDL LNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFD AKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGKDVVVAADFSSTIL SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNT PPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNV PFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERR HG >gi|299856444|gb|ADWV01000007.1| GENE 59 63878 - 64570 726 230 aa, chain - ## HITS:1 COG:ycaP KEGG:ns NR:ns ## COG: ycaP COG2323 # Protein_GI_number: 16128873 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 230 1 230 230 463 100.0 1e-130 MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRGVRQMSLFEVLIILTLG SAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLEDLLEGKPVVIIEDGELAW SKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQISVYFFEDDKVKPGLLILPSDC TQRYKVVPESADYACIRCSEIIHMKAGEKQLCPRCANPEWTKASRAKRVT >gi|299856444|gb|ADWV01000007.1| GENE 60 64700 - 66460 1993 586 aa, chain + ## HITS:1 COG:ycaO KEGG:ns NR:ns ## COG: ycaO COG1944 # Protein_GI_number: 16128872 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 586 4 589 589 1186 99.0 0 MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEG LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM AIFKKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGS EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQ ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAA SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK >gi|299856444|gb|ADWV01000007.1| GENE 61 66866 - 67723 667 285 aa, chain + ## HITS:1 COG:ECs0987 KEGG:ns NR:ns ## COG: ECs0987 COG2116 # Protein_GI_number: 15830241 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Escherichia coli O157:H7 # 1 285 1 285 285 535 100.0 1e-152 MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTG TMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKASGRITWGQLAKNWLNVYFG NLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVW MSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFASPEFWTAVGSAPE NFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRENDHH >gi|299856444|gb|ADWV01000007.1| GENE 62 67778 - 70060 2550 760 aa, chain + ## HITS:1 COG:pflB KEGG:ns NR:ns ## COG: pflB COG1882 # Protein_GI_number: 16128870 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 1 760 1 760 760 1563 99.0 0 MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATEATTTLWDKVME GVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQTEAPLKRALIPFGGIKMIE GSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRCRKSGVLTGLPDAYGRGRIIG DYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTIRLREEIAEQHRALGQMKEMAAK YGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMSFGRTSTFLDVYIERDLKAGKITEQ EAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGLDGRTLVTKNSFRFLNT LYTMGPSPEPNMTILWSEKLPLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACC VSPMIVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDLLNYDEVMERM DHFMDWLAKQYITALNIIHYMHDKYSYEASLMALHDRDVIRTMACGIAGLSVAADSLSAI KYAKVKPIRDEDGLAIDFEIEGEYPQFGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIP TQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYA KDGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAM ENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQSM >gi|299856444|gb|ADWV01000007.1| GENE 63 70252 - 70992 712 246 aa, chain + ## HITS:1 COG:ECs0985 KEGG:ns NR:ns ## COG: ECs0985 COG1180 # Protein_GI_number: 15830239 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 519 100.0 1e-147 MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEV VTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDEL LEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDS AHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQY GHKVMF >gi|299856444|gb|ADWV01000007.1| GENE 64 71074 - 71664 395 196 aa, chain - ## HITS:1 COG:ycaK KEGG:ns NR:ns ## COG: ycaK COG2249 # Protein_GI_number: 16128868 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli K12 # 1 196 1 196 196 399 99.0 1e-111 MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYRRNFNPVMTSEDEPDWK NMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYIDRVWNNGLAYGDGHKLPF NKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIEDADVTFLCNTVVFDGEELHAS YYQSLLSQVRDMVDAL >gi|299856444|gb|ADWV01000007.1| GENE 65 71764 - 72672 435 302 aa, chain + ## HITS:1 COG:ycaN KEGG:ns NR:ns ## COG: ycaN COG0583 # Protein_GI_number: 16128867 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 302 1 302 302 626 99.0 1e-179 MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQRLKIRLFNRTTRSVSLT EAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAARVAARIFLMPLLVGFTREYP DIKVELTTDDSLVDIVQQGFDAGVRLSGIVEKDMISVAIGPPVKLCVAATPEYFARYGKP RHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNIILDDVDAELEAVLMGAGIGYLL YEQIKEYLDTGRLECVLEDWSTERPGFQIYYPNRQYMSCGLRAFLDYVKTGQICQSQRHR PQ >gi|299856444|gb|ADWV01000007.1| GENE 66 72673 - 74103 1481 476 aa, chain - ## HITS:1 COG:ycaM KEGG:ns NR:ns ## COG: ycaM COG0531 # Protein_GI_number: 16128866 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 476 65 540 540 887 100.0 0 MAGNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFTPYALIVG QLGSTFKDGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWAMKGDG SLIKEYSVVALQGLTLVLFIFFMWVASRGMKSLKIVGSVAGIAMFVMSLLYVAMAVTAPA ITEVHIATTNITWETFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGML CLAVMVAVCAILGSLAMGMMFDSRNIPDDLMTNGQYYAFQKLGEYYNMGNTLMVIYAIAN TLGQVAALVFSIDAPLKVLLGDADSKYIPASLCRTNASGTPVNGYFLTLVLVAILIMLPT LGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVVRLAQKYKPEYVFIRNKPLAMTVGI WCFAFTAFACLTGIFPKMEAFTAEWTFQLALNVATPFVLVGLGLIFPLLARKANSK >gi|299856444|gb|ADWV01000007.1| GENE 67 74313 - 75461 928 382 aa, chain - ## HITS:1 COG:ECs0983 KEGG:ns NR:ns ## COG: ECs0983 COG0477 # Protein_GI_number: 15830237 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 639 99.0 0 MSTYTRPVMLLLSGLLLLTLAIAVLNTLVPLWLAQEHMSTWQVGVVSSSYFTGNLVGTLL TGYVIKRIGFNRSYYLASFIFAAGCAGLGLMIGFWSWLAWRFVAGVGCAMIWVVVESALM CSGTSRNRGRLLAAYMMVYYVGTFLGQLLVSKVSTELMSVLPWVTGLTLAGILPLLFTRV LNQQAENHDSTSITAMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHKGVSNASIGFW MAVLVSAGILGQWPIGRLADKFGRLLVLRVQVFVVILGSIAMLSQAAMAPALFILGAAGF TLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGSLLGPSFTAMLMQNFSDNLLFIMIASV SFIYLLMLLRNAGHTPKPVAHV >gi|299856444|gb|ADWV01000007.1| GENE 68 75776 - 76402 635 208 aa, chain + ## HITS:1 COG:ECs0982 KEGG:ns NR:ns ## COG: ECs0982 COG1335 # Protein_GI_number: 15830236 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 430 100.0 1e-121 MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSF ETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVA FPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRDWRNDI EGLATLFSNHIPDYRNLMTSYDTLTKQK >gi|299856444|gb|ADWV01000007.1| GENE 69 76438 - 77301 863 287 aa, chain - ## HITS:1 COG:ECs0981 KEGG:ns NR:ns ## COG: ECs0981 COG3302 # Protein_GI_number: 15830235 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 437 99.0 1e-122 MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRVIACMFGLWVLMGIGFI ASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGWLLAMLKKLSPALRTLWLI VTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMFMGGPLLGYLLLSLAGVDGWA MRLLPAISVLALVVSGVMSVMQGTELATIHSSVQQAAALVPDYGALMSWRIVLLAVALCL WIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYGLHMTVGMAVAS >gi|299856444|gb|ADWV01000007.1| GENE 70 77303 - 77920 630 205 aa, chain - ## HITS:1 COG:dmsB KEGG:ns NR:ns ## COG: dmsB COG0437 # Protein_GI_number: 16128862 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 205 1 205 205 414 100.0 1e-116 MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAGGDWQEDNGVWHQNVFA YYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNETK GHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRKKHGDLAAVAPLPRAHFTKPN IVIKPNANSRPTGDTTGYLANPKEV >gi|299856444|gb|ADWV01000007.1| GENE 71 77931 - 80375 2352 814 aa, chain - ## HITS:1 COG:dmsA KEGG:ns NR:ns ## COG: dmsA COG0243 # Protein_GI_number: 16128861 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 30 814 1 785 785 1627 99.0 0 MKTKIPDAVLAAEVSRRGLVKTTAIGGLAMASSALTLPFSRIAHAVDSAIPTKSDEKVIW SACTVNCGSRCPLRMHVVDGEIKYVETDNTGDDNYDGLHQVRACLRGRSMRRRVYNPDRL KYPMKRVGARGEGKFERISWEEAYDIIATNMQRLIKEYGNESIYLNYGTGTLGGTMTRSW PPGNTLVARLMNCCGGYLNHYGDYSSAQIAEGLNYTYGGWADGNSPSDIENSKLVVLFGN NPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTDTGAGREDEWIPIRPGTDAALVNGL AYVMITENLVDQAFLDKYCVGYDEKTLPASAPKNGHYKAYILGEGPDGVAKTPQWASQIT GIPAEKIIQLAREIGSTKPAFISQGWGPQRHANGEIATRAISMLAILTGNVGINGGNSGA REGSYSLPFVRMPTLENPIQTSISMFMWTDAIERGPEMTALRDGVRGKDKLDVPIKMIWN YAGNCLINQHSEINRTHEILQDDKKCELIVVIDCHMTSSAKYADILLPDCTASEQMDFAL DASCGNMSYVIFNDQVIKPRFECKTIYEMTSELAKRLGVEQQFTEGRTQEEWMRHLYAQS REAIPELPTFEEFRKQGIFKKRDPQGHHVAYKAFREDPQANPLTTPSGKIEIYSQALADI AATWELPEGDVIDPLPIYTPGFESYQDPLNKQYPLQLTGFHYKSRVHSTYGNVDVLKAAC RQEMWINPLDAQKRGINNGDKVRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYDPDAKR VDKGGCINVLTTQRPSPLAKGNPSHTNLVQVEKV >gi|299856444|gb|ADWV01000007.1| GENE 72 80614 - 81906 1569 430 aa, chain - ## HITS:1 COG:ECs0978 KEGG:ns NR:ns ## COG: ECs0978 COG0172 # Protein_GI_number: 15830232 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 430 1 430 430 865 100.0 0 MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ AKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDN VEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFM LDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEV PLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPED SMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCS NVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLR PYMNGLEYIG >gi|299856444|gb|ADWV01000007.1| GENE 73 81997 - 83340 1157 447 aa, chain - ## HITS:1 COG:ECs0977 KEGG:ns NR:ns ## COG: ECs0977 COG2256 # Protein_GI_number: 15830231 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 447 1 447 447 870 99.0 0 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVNDSGKRVLKPELLTEI AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN RGLEGKIGEKLAWLAEQDQNSPIKRYR >gi|299856444|gb|ADWV01000007.1| GENE 74 83351 - 83962 651 203 aa, chain - ## HITS:1 COG:ECs0976 KEGG:ns NR:ns ## COG: ECs0976 COG2834 # Protein_GI_number: 15830230 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Escherichia coli O157:H7 # 1 203 2 204 204 378 100.0 1e-105 MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDL WVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSS DWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQN GAVDAAKFTFTPPQGVTVDDQRK >gi|299856444|gb|ADWV01000007.1| GENE 75 84117 - 88184 3978 1355 aa, chain - ## HITS:1 COG:ZftsK KEGG:ns NR:ns ## COG: ZftsK COG1674 # Protein_GI_number: 15800753 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Escherichia coli O157:H7 EDL933 # 1 1355 1 1342 1342 2088 97.0 0 MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPI HNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVL ALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTG WSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARIL RGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEIIYTARGVAADPDDVLFSGNRAT QPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPSQPTVAW QPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPY YAPAAEQPVQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQ PQSVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPI KSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKE GIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQ QDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGAN PFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVPPQQQYQQ PQQPVAPQPQYQQPQQQVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ QQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLAD FRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYV GLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTG SGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALR WCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEP YIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPT RIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDW KARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIG YNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD >gi|299856444|gb|ADWV01000007.1| GENE 76 88319 - 88813 539 164 aa, chain - ## HITS:1 COG:ECs0974 KEGG:ns NR:ns ## COG: ECs0974 COG1522 # Protein_GI_number: 15830228 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 164 1 164 164 312 100.0 2e-85 MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQG YTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTR VPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR >gi|299856444|gb|ADWV01000007.1| GENE 77 89358 - 90323 733 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 10 317 5 306 306 286 49 4e-76 MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDL TGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYL GLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG FRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGL FVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA GTGCMAALDAERYLDGLADAK >gi|299856444|gb|ADWV01000007.1| GENE 78 90446 - 92212 170 588 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 369 570 150 351 398 70 29 7e-11 MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPRE ALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAG SWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFM ALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTM EVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEF FQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGETEIASTDPVTIEAEDLFITSP EGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPES WRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVG DQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMV THQLEDLADWDVIWVMQDGRIIEQGRYAELSVAGGPFATLLAHRQEEI >gi|299856444|gb|ADWV01000007.1| GENE 79 92213 - 93934 1593 573 aa, chain + ## HITS:1 COG:cydC KEGG:ns NR:ns ## COG: cydC COG4987 # Protein_GI_number: 16128853 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components # Organism: Escherichia coli K12 # 1 573 1 573 573 1041 98.0 0 MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYM LPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELL NRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPL FYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQ SELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGA FQHLGQVIASAVRITDLTDQKPEVTFPDTQTHVANRVSLTLRDVQFTYPEQSQQALKGIS LQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVP QRVHLFSATLRDNLLLASPGSSDETLAEILRRVGLEKLLEDTGLNSWLGEGGRQLSGGEL RRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMHEKTVLMVTHRLRGLSRFQ QIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL >gi|299856444|gb|ADWV01000007.1| GENE 80 93976 - 94680 389 234 aa, chain + ## HITS:1 COG:aat KEGG:ns NR:ns ## COG: aat COG2360 # Protein_GI_number: 16128852 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Escherichia coli K12 # 1 234 1 234 234 493 100.0 1e-139 MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWS PDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAY HRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGH GGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE >gi|299856444|gb|ADWV01000007.1| GENE 81 94965 - 95183 257 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 70 1 70 72 103 65 6e-21 MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPY DLSKGRIVFRSR >gi|299856444|gb|ADWV01000007.1| GENE 82 95868 - 98144 1361 758 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 10 741 14 806 815 528 38 1e-149 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL LFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH >gi|299856444|gb|ADWV01000007.1| GENE 83 98175 - 98495 300 106 aa, chain - ## HITS:1 COG:ECs0967 KEGG:ns NR:ns ## COG: ECs0967 COG2127 # Protein_GI_number: 15830221 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 106 1 106 106 209 100.0 8e-55 MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQ LMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA >gi|299856444|gb|ADWV01000007.1| GENE 84 98665 - 98907 88 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSENIFAAAFRADETKPFGIVEPLNSTLFHASTSFANLIQVRWNKPGSERGLFKTSPTLE IQFRELGRAVKHLTGDRGQV >gi|299856444|gb|ADWV01000007.1| GENE 85 98818 - 99042 231 74 aa, chain + ## HITS:1 COG:ECs0966 KEGG:ns NR:ns ## COG: ECs0966 COG1278 # Protein_GI_number: 15830220 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 74 1 74 74 145 100.0 2e-35 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH ASVIVPVEVEAAVA >gi|299856444|gb|ADWV01000007.1| GENE 86 99115 - 101061 364 648 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 256 648 7 413 413 144 27 2e-33 MTPLLELKDIRRSYPAGDEQVEVLKGITLDIYAGEMVAIVGASGSGKSTLMNILGCLDKA TSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQ RLLRAQGLLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSG EEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNVAGGTEPV VNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMV LADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRY NNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVV GEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGF DSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGV MNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQL FLPGWEIGFSPLALLLAFLCSTATGILFGWLPARNAARLDPVDALARE >gi|299856444|gb|ADWV01000007.1| GENE 87 101058 - 102173 1262 371 aa, chain - ## HITS:1 COG:ECs0964 KEGG:ns NR:ns ## COG: ECs0964 COG0845 # Protein_GI_number: 15830218 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 371 10 380 380 643 99.0 0 MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALR KVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEA ELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTN LDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPG QKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQL TDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEV VIGEAKPGAAQ >gi|299856444|gb|ADWV01000007.1| GENE 88 102330 - 103280 654 316 aa, chain + ## HITS:1 COG:ybjX KEGG:ns NR:ns ## COG: ybjX COG2990 # Protein_GI_number: 16128845 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 316 15 330 330 604 99.0 1e-173 MSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMN ELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRGCMSAEEFSLYL NTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKR TMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHI YRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRY EMLDAIQPQMATMFRG >gi|299856444|gb|ADWV01000007.1| GENE 89 103277 - 104935 1182 552 aa, chain - ## HITS:1 COG:ECs0962 KEGG:ns NR:ns ## COG: ECs0962 COG3593 # Protein_GI_number: 15830216 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Escherichia coli O157:H7 # 1 552 1 552 552 1072 99.0 0 MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDF WFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAE DGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVE VTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNE QRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLH PIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTED SRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLK PLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQ GFSDVFHRVAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMF SRVLWLARGRAD >gi|299856444|gb|ADWV01000007.1| GENE 90 105361 - 106056 812 231 aa, chain + ## HITS:1 COG:ECs0961 KEGG:ns NR:ns ## COG: ECs0961 COG0580 # Protein_GI_number: 15830215 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 353 100.0 2e-97 MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGG HFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNG YGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPV TNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRN >gi|299856444|gb|ADWV01000007.1| GENE 91 106511 - 107410 874 299 aa, chain + ## HITS:1 COG:ybjE KEGG:ns NR:ns ## COG: ybjE COG2431 # Protein_GI_number: 16128842 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 299 17 315 315 479 100.0 1e-135 MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFMGISLAFLDNLASNLLA ILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRIAMALESLKLCGVVVIGFA IGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVVSSLI GGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLI PGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA >gi|299856444|gb|ADWV01000007.1| GENE 92 107554 - 109206 2042 550 aa, chain + ## HITS:1 COG:ybjW KEGG:ns NR:ns ## COG: ybjW COG1151 # Protein_GI_number: 16128841 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Escherichia coli K12 # 1 550 3 552 552 1160 100.0 0 MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINH DVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQL VSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIY AQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATA GKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQ QVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMA GFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFAT SVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVN DLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTV EEDMKQLLSA >gi|299856444|gb|ADWV01000007.1| GENE 93 109218 - 110186 945 322 aa, chain + ## HITS:1 COG:ybjV KEGG:ns NR:ns ## COG: ybjV COG1018 # Protein_GI_number: 16128840 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 1 322 1 322 322 663 100.0 0 MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYALVSVRNSAETLRAYTIS STPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAG CGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEWRNYPVTLVAENNVTEGFIAG RLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALGVTRFFKEKFFTPVAEAATSGLK FTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTD AEIAEGYVLACSCHPQGDLVLA >gi|299856444|gb|ADWV01000007.1| GENE 94 110319 - 112037 1848 572 aa, chain + ## HITS:1 COG:ECs0957 KEGG:ns NR:ns ## COG: ECs0957 COG0028 # Protein_GI_number: 15830211 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 572 1 572 572 1149 99.0 0 MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEWMSTRHEEVAAFAAGAE AQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQEL FRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLPGDVALKPAPEGATTHWYHAP QPIVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKELVEFAGKIKAPIVHALRGKEHV EYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQFPYRAFYPTDAKIIQIDINPASIGA HSKVDMALVGDIKSTLRALLPLVEEKTDRKFLDKALEDYRDARKGLDDLAKPSEKAIHPQ YLAQQISHFAADDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAQA TEPERQVVAMCGDGGFSMLMGDFLSVVQMKLPVKIVVFNNSVLGFVAMEMKAGGYLTDGT ELHDTNFARIAEACGITGIRVEKASEVDEALQRAFSIDGPVLVDVVVAKEELAIPPQIKL EQAKGFSLYMLRAIISGRGDEVIELAKTNWLR >gi|299856444|gb|ADWV01000007.1| GENE 95 112074 - 113075 1197 333 aa, chain + ## HITS:1 COG:ybjU KEGG:ns NR:ns ## COG: ybjU COG2008 # Protein_GI_number: 16128838 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Escherichia coli K12 # 1 333 1 333 333 660 99.0 0 MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQ ANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKI KPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERNLALHVDGARIFNAVVAYGCE LKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRKMAGGGMRQSGILAAAGMY ALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTNMLFVRVGEENAAALGEYMKARNVL INASPIVRLVTHLDVSREQLAEVAAHWRAFLAR >gi|299856444|gb|ADWV01000007.1| GENE 96 113086 - 114516 1197 476 aa, chain + ## HITS:1 COG:ybjT KEGG:ns NR:ns ## COG: ybjT COG0702 # Protein_GI_number: 16128837 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 476 11 486 486 958 99.0 0 MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNL PALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQS DHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTT PIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTR WISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEK LVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNIL WQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEPEKQLTLLFGMKAPGLGRLC FSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD >gi|299856444|gb|ADWV01000007.1| GENE 97 114615 - 115628 950 337 aa, chain + ## HITS:1 COG:ybjS KEGG:ns NR:ns ## COG: ybjS COG0451 # Protein_GI_number: 16128836 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 337 13 349 349 707 99.0 0 MKVLVTGATSGLGRNAIEFLCQKGISVRATGRNEAMGKLLEKMGAEFVPADLTELVSSQA KVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFD YHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQTRFTILRPQSLFGPHDKVFI PRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPSGRVYNITNGEHR TLRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMERLGRKSAKEPPLTHYGVSKLNFDFT LDITRAQEELGYQPVITLDEGIEKTAAWLRDHGKLPR >gi|299856444|gb|ADWV01000007.1| GENE 98 115625 - 116455 820 276 aa, chain - ## HITS:1 COG:ECs0953 KEGG:ns NR:ns ## COG: ECs0953 COG3023 # Protein_GI_number: 15830207 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Escherichia coli O157:H7 # 1 276 1 276 276 541 99.0 1e-154 MRRVFWLIAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSL ATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIEL ENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPL FPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRR VIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD >gi|299856444|gb|ADWV01000007.1| GENE 99 116452 - 116775 521 107 aa, chain - ## HITS:1 COG:ECs0952 KEGG:ns NR:ns ## COG: ECs0952 COG0393 # Protein_GI_number: 15830206 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 107 1 107 107 186 99.0 9e-48 MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREI AFEELGSQARALGTDAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR >gi|299856444|gb|ADWV01000007.1| GENE 100 116901 - 117416 338 171 aa, chain + ## HITS:1 COG:no KEGG:B21_00876 NR:ns ## KEGG: B21_00876 # Name: ybjP # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 171 1 171 171 338 99.0 4e-92 MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDI TALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIP LRVDLKQGDQSWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR >gi|299856444|gb|ADWV01000007.1| GENE 101 117562 - 118362 242 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 23 244 1 215 305 97 29 3e-19 MHNYSVKGTIFDLNSYQTASIRVSMSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGP SGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPH LTVQQNLIEAPCRVLGLSKDLALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARAL MMEPQVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMEN GHIVEQGDASCFTEPQTEAFKNYLSH >gi|299856444|gb|ADWV01000007.1| GENE 102 118380 - 119111 1078 243 aa, chain + ## HITS:1 COG:artI KEGG:ns NR:ns ## COG: artI COG0834 # Protein_GI_number: 16128831 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 1 243 1 243 243 475 100.0 1e-134 MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIVGFDVDLAQALCKEIDA TCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTTPYYDNSALFVGQQGKYTS VDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVVTE WLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQKLNTALEKVKKDGTYETIYNKW FQK >gi|299856444|gb|ADWV01000007.1| GENE 103 119118 - 119834 856 238 aa, chain + ## HITS:1 COG:artQ KEGG:ns NR:ns ## COG: artQ COG4215 # Protein_GI_number: 16128830 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Escherichia coli K12 # 1 238 1 238 238 426 100.0 1e-119 MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEI LVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVSPFLCGVIALSLLYAAYAS QTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVS LISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERRPS >gi|299856444|gb|ADWV01000007.1| GENE 104 119834 - 120502 954 222 aa, chain + ## HITS:1 COG:ECs0944 KEGG:ns NR:ns ## COG: ECs0944 COG4160 # Protein_GI_number: 15830198 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 372 100.0 1e-103 MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPL LVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIPEG QWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLL YGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAFERRN >gi|299856444|gb|ADWV01000007.1| GENE 105 120794 - 121525 879 243 aa, chain + ## HITS:1 COG:artJ KEGG:ns NR:ns ## COG: artJ COG0834 # Protein_GI_number: 16128828 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 1 243 1 243 243 481 99.0 1e-136 MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQA ECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKT FADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAFIDLKNGRIDGVFGDTAVVNE WLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKINDQW FPQ >gi|299856444|gb|ADWV01000007.1| GENE 106 121700 - 122827 1087 375 aa, chain - ## HITS:1 COG:ybjF KEGG:ns NR:ns ## COG: ybjF COG2265 # Protein_GI_number: 16128827 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 375 1 375 375 756 98.0 0 MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAK MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRG ELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQEQLPQLKVITVNIQPVHMAIM EGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDL FCGVGGFGLHCATPDMQLTGIEIASEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEV PELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGYRIERVQLFDMF PHTAHYEVLTLLVKQ >gi|299856444|gb|ADWV01000007.1| GENE 107 122868 - 123356 419 162 aa, chain - ## HITS:1 COG:no KEGG:LF82_2664 NR:ns ## KEGG: LF82_2664 # Name: ybjO # Def: inner membrane protein YbjO # Organism: E.coli_LF82 # Pathway: not_defined # 1 162 1 162 162 290 100.0 1e-77 MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSV QTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQITAASYLWAASLGYGYPEL FSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQLQ >gi|299856444|gb|ADWV01000007.1| GENE 108 123416 - 124261 774 281 aa, chain - ## HITS:1 COG:STM0880 KEGG:ns NR:ns ## COG: STM0880 COG1177 # Protein_GI_number: 16764242 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Salmonella typhimurium LT2 # 1 281 1 281 281 451 93.0 1e-126 MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELLRDDA MMSAVGLSLTIAACAATAAAILGTITAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLS LLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGAT PLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNP EINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQRARHG >gi|299856444|gb|ADWV01000007.1| GENE 109 124258 - 125211 973 317 aa, chain - ## HITS:1 COG:potH KEGG:ns NR:ns ## COG: potH COG1176 # Protein_GI_number: 16128824 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Escherichia coli K12 # 1 317 1 317 317 549 99.0 1e-156 MSTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLAEMA RAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQSLQVAVISTICCLLIGYPL AWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTI LHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGG IIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIV PIMWFHKHQQKSVGEHG >gi|299856444|gb|ADWV01000007.1| GENE 110 125221 - 126354 1380 377 aa, chain - ## HITS:1 COG:ECs0935 KEGG:ns NR:ns ## COG: ECs0935 COG3842 # Protein_GI_number: 15830189 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 377 1 377 377 760 99.0 0 MNDAIPRPQAKTRKALTPLLEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKST LLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDK LPKAEIVGRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGAL DKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH PTTRYSAEFIGSVNVFEGVLKERHEDGLVLYSPGLVHPLKVDADASVVDNVPVHVALRPE KIMLCEEPPANGCNFAVGEVIHIAYLGDLSVYHVRLKSGQMISAQLQNAHRHRKGLPTWG DEVRLCWEVDSCVVLTV >gi|299856444|gb|ADWV01000007.1| GENE 111 126449 - 127561 1227 370 aa, chain - ## HITS:1 COG:potF KEGG:ns NR:ns ## COG: potF COG0687 # Protein_GI_number: 16128822 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Escherichia coli K12 # 1 370 1 370 370 732 99.0 0 MTALNKKWLSGLVAGALMAVSVSTLAAEQKTLHIYNWSDYIAPDTVANFEKETGIKVVYD VFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLV AKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFL DAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICV AIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLL RPDVVAHISDHVFYANANKAATPLVSAEVRENPGIYPPADVRAKLFTLKVQDPKIDRVRT RAWTKVKSGK >gi|299856444|gb|ADWV01000007.1| GENE 112 127912 - 128388 462 158 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_0925 NR:ns ## KEGG: EcE24377A_0925 # Name: not_defined # Def: TPR repeat-containing protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 158 17 174 174 310 100.0 1e-83 MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAM AEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFV RQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH >gi|299856444|gb|ADWV01000007.1| GENE 113 128476 - 129378 1507 300 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15830186|ref|NP_308959.1| ribosomal protein S6 modification protein [Escherichia coli O157:H7 str. Sakai] # 1 300 1 300 300 585 99 1e-166 MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPAASSIHYKGRKLPHFDA VIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIA HSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRGLNAHILVQEYI KEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGGAASVASITPQEREIAIKAARTM ALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGIDIAGKMIRWIERHATTEYCLKTGG >gi|299856444|gb|ADWV01000007.1| GENE 114 129577 - 130161 634 194 aa, chain - ## HITS:1 COG:mdaA KEGG:ns NR:ns ## COG: mdaA COG0778 # Protein_GI_number: 16128819 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli K12 # 1 194 1 194 240 379 100.0 1e-105 MTPTIELICGHRSIRHFTDEPISEAQREAIINSARATSSSSFLQCSSIIRITDKALREEL VTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLLLGVVDTAMMAQNALIAAE SLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWPADNPDLKPRLPASILVHENS YQPLDKGALAQYDE >gi|299856444|gb|ADWV01000007.1| GENE 115 130145 - 130432 219 95 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0894 NR:ns ## KEGG: ECO103_0894 # Name: ybjC # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 95 1 95 95 148 98.0 8e-35 MRAIGKLPKSVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH >gi|299856444|gb|ADWV01000007.1| GENE 116 130592 - 130849 503 85 aa, chain + ## HITS:1 COG:ECs0929 KEGG:ns NR:ns ## COG: ECs0929 COG0695 # Protein_GI_number: 15830183 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Escherichia coli O157:H7 # 1 85 1 85 85 169 100.0 1e-42 MQTVIFGRPGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVP QIFVDQQHIGGYTDFAAWVKENLDA >gi|299856444|gb|ADWV01000007.1| GENE 117 130879 - 131256 115 125 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_0827 NR:ns ## KEGG: ECIAI39_0827 # Name: ybjM # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 125 1 125 125 217 100.0 1e-55 MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLFFILPGAVASFFSQRRE VLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFWCALGALCFLFISSLFKPQ HRKNQ >gi|299856444|gb|ADWV01000007.1| GENE 118 131526 - 133211 1673 561 aa, chain + ## HITS:1 COG:ECs0927 KEGG:ns NR:ns ## COG: ECs0927 COG2985 # Protein_GI_number: 15830181 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 561 1 561 561 1046 100.0 0 MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVLVVSLLLGQQHFSINTD ALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALVIALGLGKLFGWDIGL TAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLSLGYALTYLIGLVSLIVGARY LPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAYRVGPELVAWTDGKNLRELGIYR QTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYPDAHARLDPSFRNGKEVFDRDLLDM RIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGD ARRVKTIADRIGFISIHSQVTDLLAFCAFFVIGLMIGMITFQFSTFSFGMGNAAGLLFAG IMLGFMRANHPTFGYIPQGALSMVKEFGLMVFMAGVGLSAGSGINNGLGAIGGQMLIAGL IVSLVPVVICFLFGAYVLRMNRALLFGAMMGARTCAPAMEIISDTARSNIPALGYAGTYA IANVLLTLAGTIIVMVWPGLG >gi|299856444|gb|ADWV01000007.1| GENE 119 133447 - 133665 124 72 aa, chain - ## HITS:1 COG:no KEGG:B21_00857 NR:ns ## KEGG: B21_00857 # Name: ybl53 # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 72 12 83 83 125 98.0 4e-28 MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHETFVRSIATPKESNPVQP HPMKSGQGALSL >gi|299856444|gb|ADWV01000007.1| GENE 120 133756 - 134856 906 366 aa, chain - ## HITS:1 COG:STM2695 KEGG:ns NR:ns ## COG: STM2695 COG3500 # Protein_GI_number: 16766008 # Func_class: R General function prediction only # Function: Phage protein D # Organism: Salmonella typhimurium LT2 # 1 366 1 366 366 628 87.0 1e-180 MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLMSLTLTDNRGFEADQLDLELDDADGK IVLPRRGAVITLALGWKGQPLFPKGAFTVDEIEHTGAPDRLTIRARSADFRETLNTRREK SWHKTTVGEVVKEIAVRHKLKMALGKDLSDKPVEHIDQTNESDGSFLMRLARQYGAIASV KNGNLLFIRQGQGKSASGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKK ESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRG VASFSLQLAEGRADLYTEMPVKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLELEVRI DDFEME >gi|299856444|gb|ADWV01000007.1| GENE 121 134853 - 135338 526 161 aa, chain - ## HITS:1 COG:STM2696 KEGG:ns NR:ns ## COG: STM2696 COG3499 # Protein_GI_number: 16766009 # Func_class: R General function prediction only # Function: Phage protein U # Organism: Salmonella typhimurium LT2 # 1 160 1 160 161 266 86.0 1e-71 MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDMLTLSGVLMPEI TGGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSL KRVDESLSDMFGDLSAQLNNLQDMATSALSDISKTVGGLLS >gi|299856444|gb|ADWV01000007.1| GENE 122 135335 - 136840 1296 501 aa, chain - ## HITS:1 COG:STM2697 KEGG:ns NR:ns ## COG: STM2697 COG5283 # Protein_GI_number: 16766010 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Salmonella typhimurium LT2 # 138 501 582 935 935 459 74.0 1e-129 MPLMDILYTVKSVTGALRRWVEANPELTGTLMKVAAIVAAVTVGLGTLAVALAAVLGPLA VIRLGFSVLGIKTLPSVTAAVTRTSSALSWLAGAPLAVLRRGLASSGNAAGLLTAPLSSL RRTASLTGNVLKTVAGAPVALLRSGLSGLRAVAVMFMNPLAVLRGGLTAAGAVLRVLASG PLAMLRVALYAVSGLLGALLSPIGLVVTALAGVALVVWKYWQPITAFLGGVVEGFKAAAG PISAAFEPLKPVFQWIGDKVQALWGWFTDLLTPVKSTSAELQSAAAMGRRFGEALAEGLN MVMHPLDSLKSGVSWLLEKLGIVSKEAAKAKLPESVTRQQPATVNADGKVMMPSGGFPSW GYGFAGMYDSGGYIPRGQFGIVGENGPEIVNGPANVTSRRNTAALAAVVAEMMGVAAAPT ELPPLHPLALPAKGGEAMVSRAATVPPVQRIEAPTQIIIQTQPGQSAQDIAREVARQLDE RERRLKAKARSNYSDQGGYDA >gi|299856444|gb|ADWV01000007.1| GENE 123 136906 - 137208 357 100 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1794 NR:ns ## KEGG: ECIAI39_1794 # Name: not_defined # Def: putative phage tail protein E # Organism: E.coli_IAI39 # Pathway: not_defined # 1 100 1 100 100 150 100.0 1e-35 MSDKQTEKTIQLDTPIKRGKTEITEIVLRKPQSGALRGTRLQAIMDMDVNAMMTVIPRIS SPALTAQEIAEMDPADLTAMSVEVVTFLLKKSVLAGLPTA >gi|299856444|gb|ADWV01000007.1| GENE 124 137263 - 137778 566 171 aa, chain - ## HITS:1 COG:STM2700 KEGG:ns NR:ns ## COG: STM2700 COG3498 # Protein_GI_number: 16766013 # Func_class: R General function prediction only # Function: Phage tail tube protein FII # Organism: Salmonella typhimurium LT2 # 1 171 1 171 171 315 95.0 2e-86 MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKYEKYRGGGMPGAVDVDLGLDDSALDT EFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAVELVVRGRHKEVDSGEWKT GESNTTKVTSTNSYAKLTINGEVLYEVDLINMVEIVDGVDLMEAHRNALGL >gi|299856444|gb|ADWV01000007.1| GENE 125 137788 - 138522 637 244 aa, chain - ## HITS:1 COG:STM2701 KEGG:ns NR:ns ## COG: STM2701 COG3497 # Protein_GI_number: 16766014 # Func_class: R General function prediction only # Function: Phage tail sheath protein FI # Organism: Salmonella typhimurium LT2 # 1 244 147 390 390 458 89.0 1e-129 MAQSLRGFAYLSAYGCKTVQEAITYRENFSQREGMLIWPDFTGWDTVLNAEATAYATARA LGLRAKIDEQTGWHKSLSNVGVNGVTGISADVFWDLQDPATDAGLLNQNDVTTLVRKDGF RFWGSRCLSDDPLFAFENYTRTAQVLTDTMAEAHMWAVDKPLNPSLARDIIEGIRAKMRS LVSQGYLIGGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDQYLVNFSS QVSA >gi|299856444|gb|ADWV01000007.1| GENE 126 138584 - 138739 74 51 aa, chain - ## HITS:1 COG:STM2710 KEGG:ns NR:ns ## COG: STM2710 COG4540 # Protein_GI_number: 16766023 # Func_class: R General function prediction only # Function: Phage P2 baseplate assembly protein gpV # Organism: Salmonella typhimurium LT2 # 1 43 1 43 192 81 88.0 3e-16 MNAQLTEIMRLITNLIRTGVVTEVDRDNWLCRVKTGDLETNWIICPVTARR >gi|299856444|gb|ADWV01000007.1| GENE 127 138835 - 139701 382 288 aa, chain + ## HITS:1 COG:no KEGG:SeD_A3038 NR:ns ## KEGG: SeD_A3038 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Dublin # Pathway: not_defined # 1 288 1 288 288 541 99.0 1e-152 MTQIAIYGFNFTKKITFDGGELTPIFSSWSELKKNGWDNDRYILTGFFKPNSNNYATQQQ LIFDLQAVLSFIEQKNVIISGELENDETPFNFKPSLPKKLDKKRDKGAGIIIMEDYFAPN SRENFICLAMEKLNSKAMLKQDAFRTSFFKSMLAFRDSINYIDVRYYLLFSALEALCRFI KNDYSPAKTPQIITQVLKEYGFNVEKTGHTLAQRNIMHYCKLRHSLFHNGKYIAYLDEKN SDGKIEIQDYSSNLNLLVPLVLMKFIGFDDNYINWDSWIDRNPFISKK >gi|299856444|gb|ADWV01000007.1| GENE 128 139728 - 140045 156 105 aa, chain - ## HITS:1 COG:no KEGG:SeD_A3039 NR:ns ## KEGG: SeD_A3039 # Name: not_defined # Def: phage virion morphogenesis protein # Organism: S.enterica_Dublin # Pathway: not_defined # 1 105 44 148 148 166 95.0 2e-40 MQRNPDGSSYEPRRVTARSKKGRIKRQMFTKLRTTKYLKTAASADSASVQFEGKVQRIAR VHHYGLRDRISRRGPEVRYAERRLLGVNDDVETVIQDALLNWLQR >gi|299856444|gb|ADWV01000007.1| GENE 129 140167 - 140598 377 143 aa, chain - ## HITS:1 COG:no KEGG:SeD_A3040 NR:ns ## KEGG: SeD_A3040 # Name: gpr # Def: phage tail completion protein R # Organism: S.enterica_Dublin # Pathway: not_defined # 1 143 1 143 143 275 98.0 3e-73 MNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVATGTSSMSWEYRYTLNAVIEDFSGD QNLLMAPVLLWLRDNQPDAINNPALREKLFTFEVDILRNDVCDISLNLQLTERVLVSTDG SVSSVEAIAEPDEPEEMWTVKRG >gi|299856444|gb|ADWV01000007.1| GENE 130 140694 - 141122 217 142 aa, chain - ## HITS:1 COG:no KEGG:ECED1_3080 NR:ns ## KEGG: ECED1_3080 # Name: not_defined # Def: putative regulatory protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 142 1 142 142 181 95.0 5e-45 MNRLLLVMLALLLAALGWQTWRLADASRTISTQADELQSKSQALAKSNSQLISLSILTET NNREQARLYADAEQTSALLRQRQRRIEELKRENEDLRRWADTPLPADIIRLRERPALTGG AAYRQWLSASDAVSAGSDSAAH >gi|299856444|gb|ADWV01000007.1| GENE 131 141119 - 141496 312 125 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1807 NR:ns ## KEGG: ECIAI39_1807 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 125 25 149 149 169 95.0 4e-41 MKKKLISGLFLMLWMALLIAAMVYPQGIFSVLAASGVWVACLLTWAAIPVALAALIKNGS LWQELRVSLLKTITRKENVFISWVMRLLIVVSLVWTGWAITLVFYLLTVIAFWITRNQMA QQVAA >gi|299856444|gb|ADWV01000007.1| GENE 132 141498 - 142010 330 170 aa, chain - ## HITS:1 COG:STM2715 KEGG:ns NR:ns ## COG: STM2715 COG3772 # Protein_GI_number: 16766028 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Salmonella typhimurium LT2 # 1 168 1 168 169 314 91.0 5e-86 MNPSIVKRCLVGAVLAIAATLPGFQQLHTSVEGLKLIADYEGCRLQPYQCSAGVWTDGIG NTSDVIPGKTITERQAAEGLISNVLRVERSLERCVKQQPPQKVYDAVVSFAFNVGTGNAC SSTLVKLLNQRRWADACRQLPRWVYVKGVFNQGLDNRRAREMAWCLQGAN >gi|299856444|gb|ADWV01000007.1| GENE 133 141991 - 142206 223 71 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2829 NR:ns ## KEGG: ECS88_2829 # Name: not_defined # Def: putative secretory protein # Organism: E.coli_S88 # Pathway: not_defined # 1 71 1 71 71 133 100.0 2e-30 MTLERISAFITYCIAVVLAWLGDLSIKDASTLGGLMIGVLMLAINWYYKHKAYQLLRDGQ ISREDYESINR >gi|299856444|gb|ADWV01000007.1| GENE 134 142210 - 142413 217 67 aa, chain - ## HITS:1 COG:STM2717 KEGG:ns NR:ns ## COG: STM2717 COG5004 # Protein_GI_number: 16766030 # Func_class: R General function prediction only # Function: P2-like prophage tail protein X # Organism: Salmonella typhimurium LT2 # 1 67 1 67 67 124 92.0 4e-29 MKVRAHQYDTVDALCWRHYGRTQGVTEQVLKANPGLAEYGPFLPHGLQVELPDIPTTTTV QTVQLWD >gi|299856444|gb|ADWV01000007.1| GENE 135 142413 - 142877 481 154 aa, chain - ## HITS:1 COG:no KEGG:LF82_p400 NR:ns ## KEGG: LF82_p400 # Name: not_defined # Def: capsid completion protein # Organism: E.coli_LF82 # Pathway: not_defined # 1 154 22 175 175 293 100.0 9e-79 MKFVAPEQAPEQAEIIRNTPFWPDVDLSEFRSVMRTDGTVTQPRLKQVALSAISEVNAEL YEFRRRQQMLGYASLAEVPAEQLDGKSERIQHYFNAVYCWARAMLNERYQDYDATASGAK RGEELAEASGDLWRDARWAISRVQDAPHCTVELI >gi|299856444|gb|ADWV01000007.1| GENE 136 142973 - 143623 652 216 aa, chain - ## HITS:1 COG:no KEGG:t3420 NR:ns ## KEGG: t3420 # Name: not_defined # Def: terminase, endonuclease subunit # Organism: S.typhi_Ty2 # Pathway: not_defined # 1 216 1 216 216 380 99.0 1e-104 MSLSPARQHRLRVQAEQAAREGGSVRHASGYDLMLLQLAEDRRRLKGVQSTVKKAEIKVE LLPKYAAWAEGVLAAGGAQQDDVLMYVMLWRIDAGDYAGALEIGRHALRHGWVMPLGNRN VQTVLAEEMADAAQSAMLAATGFDAELLLQTLELTDGLDMPDQSRARLHKAIGAVLSESN PASALNHLNHALQLDPRCGVKKDKQQLERRLRNDSR >gi|299856444|gb|ADWV01000007.1| GENE 137 143627 - 144685 1279 352 aa, chain - ## HITS:1 COG:no KEGG:SeD_A3048 NR:ns ## KEGG: SeD_A3048 # Name: not_defined # Def: phage major capsid protein, P2 family # Organism: S.enterica_Dublin # Pathway: not_defined # 1 344 1 344 352 668 99.0 0 MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINVTPV TEQSGQLLGLGVGSTIAGTTDTTAKEREPVDPTLMVDVEYKCEQTNFDTVLTYAKLDLWA KFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSENPLLQDVNKGWLQKIREDAPD HVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNELIDVVYQDDDDLMVICGRELLS DKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRAPFFPPNALLITRLDNLSIYWQEDT RRRSVIDNPKRDRIENFESVNEAYVVEDYRCAALVENIQIGDFSAAAAEAGA >gi|299856444|gb|ADWV01000007.1| GENE 138 144702 - 145535 926 277 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A0925 NR:ns ## KEGG: EcHS_A0925 # Name: not_defined # Def: phage capsid scaffolding protein # Organism: E.coli_HS # Pathway: not_defined # 1 277 1 277 277 481 99.0 1e-134 MTVKAKRFRIGVEGATTDGREIQREWLEQMAASYNPAVYTALINLEHIKSYLPDSTFNRY GKVTALFAEEITEGPLAGKMALYADVEPTESLVELVKKGQKLFTSMEVSPKFADTGKAYL VGLAATDDPASLGTEMLTFSASAAHNPLANRKQNPANLFTAAEETVIELEEVQDDKPSLF ARVTALFTKKEQSDDARFSDVHKAVELVATEQQNLSARTEKSLSEQEERLSELETALQAQ QTAFNELVDKLSHEDSRQDYRQRATGGNAPADTLTNC >gi|299856444|gb|ADWV01000007.1| GENE 139 145678 - 147444 1463 588 aa, chain + ## HITS:1 COG:RSc1939 KEGG:ns NR:ns ## COG: RSc1939 COG5484 # Protein_GI_number: 17546658 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 3 491 2 496 506 687 67.0 0 MNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWKKRDKWGDYGPLDQMQL TTAARYCQLIMKEHKEGKDFKEIDLLARQSERHARIGKFNNGGNEADLNPNVANRNKGPR RQPEKNVFTDEQIEKLEEIFHSSMFNYQRHWWEAGKTNRIRNLLKSRQIGATFYFAREAL IDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVELKGDPMVLPNGATLYFLGTNART AQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWRQTYFSTPSSLTHSAYPFWSGALFN RGRNKADKVDIDLSHSNLAPGLLCADGQYRQIVTVEDAVRGGCNLFDLDQLRMEYSPDEY QNLLMCEFVDDLASVFPLSELQACMVDSWEVWTDFHALALRPFGWREVWIGYDPAKGTQN GDSAGCVVVAPPAVPGGKFRILERHQWRGMDFRAQADAIKKLTEQYNVTYIGIDSTGVGH GVYENVKAFFPAVREFVYNPNVKNALVLKAYDIISHRRLEFDAGHTDIAQSFMAIRRATT ASGNRPTYEASRSEEASHADLAWATMHALFNEPLQGESANTSNIVEIF >gi|299856444|gb|ADWV01000007.1| GENE 140 147444 - 148466 724 340 aa, chain + ## HITS:1 COG:STM2723 KEGG:ns NR:ns ## COG: STM2723 COG5518 # Protein_GI_number: 16766036 # Func_class: R General function prediction only # Function: Bacteriophage capsid portal protein # Organism: Salmonella typhimurium LT2 # 21 340 25 344 346 597 87.0 1e-170 MKEHIAPDETVTAEETKKSVAEAFSFGDPIPVLDRRELLDYVECVQMDRWYEPPVSFDGL ARTFRAAVHHSSPISVKRDIISSTYIPHRLLSQQAFTRFVQDYLVFGNAYLEKRTNRFGE VISLEPALAKYTRRGLDLETYWFVQYSLTTQPYQFTKGNVFHLMEPDINQEIYGLPGYLS AIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNLRNAMKSAKGPGNFRNL FMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGFGD VEKASKVFVRNELIPLQKRLFEINVWLGENVITFQPYNLD >gi|299856444|gb|ADWV01000007.1| GENE 141 148515 - 149519 412 334 aa, chain - ## HITS:1 COG:DR1631 KEGG:ns NR:ns ## COG: DR1631 COG2357 # Protein_GI_number: 15806636 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Deinococcus radiodurans # 18 205 38 230 394 94 32.0 3e-19 MTDEELKEQHSIYGSVAELFRRVMVEQIDVILSENKLSLGVPIESRVKTLSSIINKDNRK PLKIESIVDLDDYVGIRLIMLFKRDVEKVISCLKEHFIILKQENKLDELDEDRFGYQSHH YVIQPPEEWLRVPSFSDFKNMKVEVQIRTLSQHIWAAASHKLQYKKEQSVPLPLRRAINR VSALLEVVDFEFERVLSEREGYVETSRLDRGTMLDVELLKMIAASELPPDNKSDDENYDD LLSELIKNKIITVGECIDALKSGLPSAIDEDKAMVRRIISNEDDYDDESELKRARLGVFF THVGLIRTAIANSMGASYIRNQTEGMDVYDDSEE >gi|299856444|gb|ADWV01000007.1| GENE 142 150035 - 150370 263 111 aa, chain + ## HITS:1 COG:no KEGG:B21_00837 NR:ns ## KEGG: B21_00837 # Name: ybl33 # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 111 1 111 111 197 100.0 8e-50 MNNIPPIPQLGIYVSKIDPTLRITVTDVDIVDGEDDSPDDELFYLVHWIEGEDESDMTAM GFELDPVEWQAFVESEQLVFERDPYMDSIPENSNLAKIRDFLMKTKQNDHS >gi|299856444|gb|ADWV01000007.1| GENE 143 150563 - 150796 307 77 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2838 NR:ns ## KEGG: ECS88_2838 # Name: not_defined # Def: putative DinI-like damage-inducible protein # Organism: E.coli_S88 # Pathway: not_defined # 1 77 25 101 101 132 100.0 3e-30 MRIEIMIDKEQKISQSTLDALESELYRNLRPLYPKTVIRIRKGSSNGVELTGLQLDEERK QVMKIMQKVWEDDSWLH >gi|299856444|gb|ADWV01000007.1| GENE 144 150807 - 150995 122 62 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2839 NR:ns ## KEGG: ECS88_2839 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 62 35 96 96 118 98.0 6e-26 MQDYFLESLKLQRIDFFLKLVAASECSDEEKGLALQWVSELTDELMAKIRSHEYNRSMDV IS >gi|299856444|gb|ADWV01000007.1| GENE 145 151148 - 153562 1521 804 aa, chain - ## HITS:1 COG:no KEGG:ECB_00825 NR:ns ## KEGG: ECB_00825 # Name: not_defined # Def: putative replication protein for prophage # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 804 1 804 804 1570 98.0 0 MSHDDMSNSSGFNEAAAAFSWNGPKKAINPYLDPAEVAPESALSNLITLYAADNEQEQLR REALSEQVWERYFFNESRDPVQREMEQDKLISRAKLAHEQQRFNPDMVILADVSAQPSHI SKPLMQRIEYFSSLGRPKAYSRYLRETIKPCLERLDCVRDSQLSVSFRFMASHQGLEGLL ILPEMSQDQVKRLSTLVAAHMSMCLEAACGDLYATDDVKPEEIRKTWEKVAAETLRLDVI PPAFEKLRRKRNRRKPVPYELIPGSLARMLCADWWYRKLWKMRCEWREEQLRAVCLVSKK ASPYVSYEAVTHKREQRRKSLEFFRSHELVNEDGDTLDMEDVVNASSSNPAHRRNEMMAC VKGLELIAEMRGDCAVFYTITCPSRFHSTLNNGRPNPTWTNATVRQSSDYLVGMFAAFRK AMHKAGLRWYGVRVAEPHHDGTVHWHLMCFMRKKDRRAITALLRKFAIREDREELGNNTG PRFKSELINPRKGTPTSYIAKYISKNIDGRGLAGEISKETGKSLRDNAEYVNAWASLHRV QQFRFFGIPGRQAYRELRLLAGQAARQQGDKKAGAPVLDDPRLDAILAAADAGCFATYIM KQGGVLVPRKYHLIRTAYEINEEPTAYGDHGIRIYGIWSPIAEGKICTHAVKWKMVRKAV DVQEAAADQGACAPWTRGNNCPLAENLNQQGKDKSADGDSRTDITRMNDKELHDYLHSMS KKERRELAARLRQVKPKRRKDYKQRITDHQRQQLVYELKSRGFDGSEKEVDLLLRGGSIP SGAGLRIFYRNQRLKEDDKWRNLY >gi|299856444|gb|ADWV01000007.1| GENE 146 153559 - 154416 489 285 aa, chain - ## HITS:1 COG:STM2730 KEGG:ns NR:ns ## COG: STM2730 COG0338 # Protein_GI_number: 16766042 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Salmonella typhimurium LT2 # 1 284 1 282 285 424 73.0 1e-119 MSTILKWAGNKTAIMSELKKYLPAGPRLVEPFAGSCAVMMETDYPSYLVADINPDLINLY KKIAADCEAFISRTRTLFEEANSDLAYYNIRQEFNYSTEITDFMKAIYFLYLNRHGYRGL CRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQRATFICASFDETLAMLKAGDVVYCDP PYDGTFSGYHTDGFTEDDQYHLASVLEYRSSEGHPVIVSNSDTSLIRSLYRNFTHHYIKA KRSIGVSAGESKSATEIIAVSGSRCWMGFDPSRGVDSSAVYEVRV >gi|299856444|gb|ADWV01000007.1| GENE 147 154413 - 154640 256 75 aa, chain - ## HITS:1 COG:STM2731 KEGG:ns NR:ns ## COG: STM2731 COG1734 # Protein_GI_number: 16766043 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Salmonella typhimurium LT2 # 1 75 1 75 75 124 90.0 5e-29 MADAMDLVQQRVEEERQRHIRAARAKTPGVSRVLCIECEAPIPPARRRAIPGVQLCITCQ EIAELKGKHYNGGAV >gi|299856444|gb|ADWV01000007.1| GENE 148 154640 - 154873 354 77 aa, chain - ## HITS:1 COG:no KEGG:t3407 NR:ns ## KEGG: t3407 # Name: not_defined # Def: hypothetical protein # Organism: S.typhi_Ty2 # Pathway: not_defined # 1 77 1 77 77 104 94.0 1e-21 MRNIETLTTKTGPDDAGLNLLLTEARLEERRARAEAMAARLDSLACHITSRQLNHVEAAE LLRVTAEAIQNEAQEIH >gi|299856444|gb|ADWV01000007.1| GENE 149 154941 - 155282 288 113 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2845 NR:ns ## KEGG: ECS88_2845 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 113 1 113 113 201 100.0 6e-51 MAINGAAATVPLSPGERLNGLNHIAELRAKVFGLNIESELERFIKDMRDPRDINNEQNKR ALAAIFFMAKIPAERHSISINELTTDEKRELIKAMNHFRAVVSLFPRRLTMPN >gi|299856444|gb|ADWV01000007.1| GENE 150 155305 - 155529 157 74 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2846 NR:ns ## KEGG: ECS88_2846 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 74 1 74 74 134 98.0 8e-31 MYAAASEVVYQFRYRGESYSVPEDDLLCCYPSLSGDGSYFFTLRDGTFLRGEQVKETIRK NVSPLERYRKNKER >gi|299856444|gb|ADWV01000007.1| GENE 151 155400 - 155696 76 98 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2847 NR:ns ## KEGG: ECS88_2847 # Name: fil # Def: conserved hypothetical protein fil of phage origin # Organism: E.coli_S88 # Pathway: not_defined # 1 98 11 108 108 186 97.0 2e-46 MLTKEPSFASLLVKQSPAMHYGHGWIMGEDGKRWHPCHSQDELLSELTTRKRRKSKCMQR QVKWFISFVTEGKVIQYLKMICSVVIRRCRAMAVTFSR >gi|299856444|gb|ADWV01000007.1| GENE 152 155704 - 156213 484 169 aa, chain - ## HITS:1 COG:no KEGG:c0936 NR:ns ## KEGG: c0936 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 169 19 187 187 327 100.0 1e-88 MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLNPAQPHLLTAPEIWLLT DLTEDSTLVDGFLAQIHCLPCVPINEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTSAG RRDAISSINSVTRLMALAAVSLQARLQANPAMASAVDTVTGLGASFGLL >gi|299856444|gb|ADWV01000007.1| GENE 153 156278 - 156481 201 67 aa, chain - ## HITS:1 COG:no KEGG:c0935 NR:ns ## KEGG: c0935 # Name: coxT # Def: putative regulator for prophage # Organism: E.coli_CFT073 # Pathway: not_defined # 1 66 1 66 73 113 96.0 2e-24 MTPNISITLNTPHVTIERYSELTGLSIDTINDMLADGRLPRHRLRKDKKREKVMINLAAL TVDALSA >gi|299856444|gb|ADWV01000007.1| GENE 154 156540 - 157196 105 218 aa, chain + ## HITS:1 COG:STM2738 KEGG:ns NR:ns ## COG: STM2738 COG2932 # Protein_GI_number: 16766050 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 33 212 9 206 210 152 38.0 6e-37 MKAPKEHFWFNFKIAFGICQRILDFFGGLVDFNSGGKKAIERLVEAYGFGTRQALCDHLG VSKSTMATRYMRDIFPADWVIQCALETGTSLNWLTTGHGSKQASANTNTIEVEKYLLSDG ALQKDGFYIFDKGFLPSTFKKPFVITDNNSEFICDKEFDDIRDGKWVISIDGEITIRDIT RLPGGRIFVEGGNRAFECKIEDIEIIGKIISLTVKYVK >gi|299856444|gb|ADWV01000007.1| GENE 155 157212 - 157403 59 63 aa, chain + ## HITS:1 COG:no KEGG:ECBD_2774 NR:ns ## KEGG: ECBD_2774 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 63 1 63 63 107 98.0 1e-22 MLGKVFFVVLSCSLLLNPLTTYARNYPCSGKKGGVSHCTSDGKFVCNDGTISKSKKICTK NSR >gi|299856444|gb|ADWV01000007.1| GENE 156 157592 - 158623 635 343 aa, chain + ## HITS:1 COG:STM2739 KEGG:ns NR:ns ## COG: STM2739 COG0582 # Protein_GI_number: 16766051 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Salmonella typhimurium LT2 # 1 336 1 337 341 373 54.0 1e-103 MAVRKLTTGKWLCECYPAGRSGRRVRKQFATKGEALAFERHTMEETESKPWLGESVDRRT LKDVVELWFKLHGKSLTAGQHVYDKLLLMVDALGNPLATNLTSKMFAHYRDKRLTGEIYF SEKWKKGASPVTINLEQSYLSSVFSELSRLGEWSYPNPLENMRKFTIAEKEMAWLTHEQI VELLADCKRQDPILALVVKICLSTGARWREAVNLTRSQVTKYRITFVRTKGKKNRSIPIS KELYEEIMALDGFNFFTDCYFQFLSVMEKTSIVLPRGQLTHVLRHTFAAHFMMSGGNILA LQKILGHHDIKMTMRYAHLAPDHLETALRFNPLATLPTSIASF >gi|299856444|gb|ADWV01000007.1| GENE 157 158682 - 158951 169 89 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_0162 NR:ns ## KEGG: EUBREC_0162 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 20 89 1 70 70 67 47.0 2e-10 MNKFQHQGAELRNRAKELALSVLKTHPDAQKNGNGVKQAEVFRLSGLDWGEKRKATSSNQ QYWVVALLRELEEEGLVEQIEDRGPWRLR >gi|299856444|gb|ADWV01000007.1| GENE 158 159102 - 159638 477 178 aa, chain - ## HITS:1 COG:ECs0926 KEGG:ns NR:ns ## COG: ECs0926 COG3226 # Protein_GI_number: 15830180 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 178 1 178 178 340 100.0 7e-94 MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDELLLEAF SSFTEIMSRQYQAFFSDVSDAQGACQAITDMIYSSQVATPDNMELMYQLYALASRKPLLK TVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERVAG >gi|299856444|gb|ADWV01000007.1| GENE 159 159722 - 160930 1145 402 aa, chain + ## HITS:1 COG:ybjJ KEGG:ns NR:ns ## COG: ybjJ COG0477 # Protein_GI_number: 16128813 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 402 1 402 402 664 99.0 0 MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSVSIAEMGGVLFGLSIGS MSGILCSAWLVKRFGTRNVILVTMSCALIGMMILSLALWLTSPLLFAVGLGVFGASFGSA EVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMALTAFGVPATVHILLAALVGI APIYIAIQAIPDGTGKNAADGTQHGEKGIPFYRDIQLLLIGVVVLAMAFAEGSANDWLPL LMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFIDRYSRVAVVRASALMGALGIGLIIF VDSAWVAGVSVVLWGLGASLGFPLTISAASDTGPDAPTRVSVVATTGYLAFLVGPPLLGY LGEHYGLRSAMLVVLALVILAAIVAKAVAKPDTKTQTAMENS >gi|299856444|gb|ADWV01000007.1| GENE 160 160930 - 161745 906 271 aa, chain + ## HITS:1 COG:ybjI KEGG:ns NR:ns ## COG: ybjI COG0561 # Protein_GI_number: 16128812 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 10 271 1 262 262 516 98.0 1e-146 MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIAN EIAFVAENGGWVVSEGKDVFNGELSKDAFTTVVEHLLTRPEVEIIACGKNSAYTLKKYDD AMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQVQKALHEAIGDIMVPVHTGN GSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGNDIEMLRQAGFSFAMENAGNAVV AAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ >gi|299856444|gb|ADWV01000007.1| GENE 161 161837 - 162115 233 92 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0887 NR:ns ## KEGG: ECO103_0887 # Name: ybjH # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 92 3 94 94 127 100.0 9e-29 MKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVPQAVSVATVPQTVYVAPA PAPAYRPHPYVRHLASVGEGMVIEHQIDDHHH >gi|299856444|gb|ADWV01000007.1| GENE 162 162156 - 163388 1303 410 aa, chain - ## HITS:1 COG:ECs0922 KEGG:ns NR:ns ## COG: ECs0922 COG0477 # Protein_GI_number: 15830176 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 410 1 410 410 717 99.0 0 MQNKLASGARLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVEQYQAGIDWVPTSMTA YLAGGMFLQWLLGPLSDRIGRRPVMLAGVVWFIITCLAILLAQNIEQFTLLRFLQGISLC FIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLVGAAWIHVLPWEGMFVLFAAL AAISFFGLQQAMPETATRIGEKLSLKELGRDYKLVLKNGRFVAGALALGFVSLPLLAWIA QSPIIIITGEQLSSYEYGLLQVPIFGALIAGNLLLARLTSRRTVRSLIIMGGWPIIIGLL VAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVRLTLFASDMSKGTVSAAMGMLQMLI FTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMVIFLKDKQMGNSHEG >gi|299856444|gb|ADWV01000007.1| GENE 163 163673 - 164269 599 198 aa, chain + ## HITS:1 COG:ECs0921 KEGG:ns NR:ns ## COG: ECs0921 COG0671 # Protein_GI_number: 15830175 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 # 1 198 1 198 198 355 99.0 3e-98 MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAAVLWLWGLTAQRQLVIKI AIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWH RLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQ SWYRFCFALPIRKGWVRD >gi|299856444|gb|ADWV01000007.1| GENE 164 164327 - 165085 686 252 aa, chain + ## HITS:1 COG:ECs0920 KEGG:ns NR:ns ## COG: ECs0920 COG1349 # Protein_GI_number: 15830174 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 528 100.0 1e-150 METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVLLGGYIVLEP RSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGTTTPWIIEAIDNEIPFTAV CYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHVSK GATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPARMGDLKRFDIVVSDCCPEDEYV KYAQTQRIKLMY >gi|299856444|gb|ADWV01000007.1| GENE 165 165132 - 166355 1285 407 aa, chain - ## HITS:1 COG:ECs0919 KEGG:ns NR:ns ## COG: ECs0919 COG1686 # Protein_GI_number: 15830173 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli O157:H7 # 8 407 1 400 400 795 100.0 0 MDTRVAFMTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVL AEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFL KPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVH GLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDG MKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKP DATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGT IDFQLNGKSIEQRPLIVMENVEEGGFFGRMWDFVMMKFHQWFGSWFS >gi|299856444|gb|ADWV01000007.1| GENE 166 166580 - 167206 571 208 aa, chain + ## HITS:1 COG:ECs0918 KEGG:ns NR:ns ## COG: ECs0918 COG0625 # Protein_GI_number: 15830172 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 208 3 210 210 400 100.0 1e-112 MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDE SDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRT PPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGLTW TPRPNLQRWYQQLTERPAVRKVVMIPVS >gi|299856444|gb|ADWV01000007.1| GENE 167 167203 - 168174 860 323 aa, chain - ## HITS:1 COG:ECs0917 KEGG:ns NR:ns ## COG: ECs0917 COG2133 # Protein_GI_number: 15830171 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose/sorbosone dehydrogenases # Organism: Escherichia coli O157:H7 # 1 323 49 371 371 649 99.0 0 MLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVG DDGKAGTAVGYGRLSDDLSKVADFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENN QRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGARAEIWSYGIRNPQGMAMNPWSNAL WLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSP AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTG PDGYLYVLTDESSGELLKVSPRN >gi|299856444|gb|ADWV01000007.1| GENE 168 168429 - 168812 226 127 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_0907 NR:ns ## KEGG: EcE24377A_0907 # Name: bssR # Def: biofilm formation regulatory protein BssR # Organism: E.coli_E24377A # Pathway: not_defined # 1 127 12 138 138 226 100.0 2e-58 MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRDNFFKLNRELHDKSLRL NLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNADKLENCLMSLTLSIQSLQK HAMLEKA >gi|299856444|gb|ADWV01000007.1| GENE 169 169025 - 170350 1844 441 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|183179613|ref|ZP_02957824.1| conserved hypothetical protein [Vibrio cholerae MZO-3] # 9 439 34 464 470 714 77 0.0 MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR LVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVKEERW NRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKP GDILRVKVEHADEYDLWGSRV >gi|299856444|gb|ADWV01000007.1| GENE 170 170397 - 171725 1004 442 aa, chain - ## HITS:1 COG:Z1058_2 KEGG:ns NR:ns ## COG: Z1058_2 COG2199 # Protein_GI_number: 15800584 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 EDL933 # 261 442 1 182 182 367 99.0 1e-101 MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVIDTAFAVANIAEYRRSVA IDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSDECIQVKEFEKNYCADIMQ VVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLERFSLLSKSLAMDSENLMFSL FKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVFAYKKDVYLRVCTLIIFFAALVA VISGTSCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDL TKAMGRKSFDEDLKALPEKGGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPV DKGKIYRFGGDEFAVIYTGGTLEELLSILKEIVHFQVGSINLSTSIGVAHSNECTTVERL KMLADERLYKSKKNGRAQISWQ >gi|299856444|gb|ADWV01000007.1| GENE 171 171733 - 174081 1518 782 aa, chain - ## HITS:1 COG:yliE_2 KEGG:ns NR:ns ## COG: yliE_2 COG2200 # Protein_GI_number: 16128801 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 526 782 1 257 257 531 100.0 1e-150 MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKD IERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVV YHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLR INGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYN SEGNYNIIDSVDTEYIAKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLV VYFMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAE IERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIV RKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKS AICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEI GELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKT AMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETV IERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAG KIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLV KE >gi|299856444|gb|ADWV01000007.1| GENE 172 174259 - 175128 864 289 aa, chain - ## HITS:1 COG:ECs0911 KEGG:ns NR:ns ## COG: ECs0911 COG1173 # Protein_GI_number: 15830165 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 289 15 303 303 536 100.0 1e-152 MPLVKPDQVRTPWHEFWRRFRRQHMAMTAALFVILLIVVAIFARWIAPYDAENYFDYDNL NNGPSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWD RLIMRICDVLFAFPGILLAIAVVAVLGSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQT FIESARSIGASDMTILLRHILPGTVSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEW GAMLNEARADMVIAPHVAVFPALAIFLTVLAFNLLGDGLRDALDPKIKG >gi|299856444|gb|ADWV01000007.1| GENE 173 175173 - 176093 938 306 aa, chain - ## HITS:1 COG:yliC KEGG:ns NR:ns ## COG: yliC COG0601 # Protein_GI_number: 16128799 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli K12 # 1 306 1 306 306 563 100.0 1e-160 MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEADAQVIELVRQQLGLDQP LYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAAGIIA AVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELGWLPTVGADSWQHYILPSLTL GAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFG FLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAIN PAIRYK >gi|299856444|gb|ADWV01000007.1| GENE 174 176111 - 177649 1668 512 aa, chain - ## HITS:1 COG:ECs0909 KEGG:ns NR:ns ## COG: ECs0909 COG0747 # Protein_GI_number: 15830163 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 512 1 512 512 991 99.0 0 MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQ GLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPA NHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAMISPAALEKYGKEIGF HPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAMLQTGEAQF AFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVTQKPFDNPKVREALNYAINRPALVK VAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTA QKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWAL SPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPL VVEKLVSAHSKNLTGFWIMPDTGFSFEDADLQ >gi|299856444|gb|ADWV01000007.1| GENE 175 177669 - 179540 844 623 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 12 572 8 528 563 329 35 5e-89 MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTAL ALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQSAAQMRHVRGADMAMIFQEPMTSLNPV FTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIA MALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVL VMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQAP PIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESG SGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTI GDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALAL NPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLG QIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAV SLQCVGPGHYVAQPQSEYAFMRR >gi|299856444|gb|ADWV01000007.1| GENE 176 179527 - 180492 1047 321 aa, chain - ## HITS:1 COG:ybiK KEGG:ns NR:ns ## COG: ybiK COG1446 # Protein_GI_number: 16128796 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Escherichia coli K12 # 1 321 1 321 321 581 99.0 1e-166 MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLL EECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHV MMIGEGAENFAFARGMERVSPEIFSTPLRYEQLLAARKEGATVLDHSGAPLDEKQKMGTV GAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRAL AAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWG YAGDTPTTGIYREKGDTVATQ >gi|299856444|gb|ADWV01000007.1| GENE 177 180696 - 181931 1222 411 aa, chain + ## HITS:1 COG:moeA KEGG:ns NR:ns ## COG: moeA COG0303 # Protein_GI_number: 16128795 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Escherichia coli K12 # 1 411 1 411 411 788 99.0 0 MEFTTGLMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDG YAVRLADIASRQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQT DNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVISKVRV ALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEA DSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGN PVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQRGVLQRNADGE LEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVDVGEWVEVEPFNALFGGL >gi|299856444|gb|ADWV01000007.1| GENE 178 181931 - 182680 869 249 aa, chain + ## HITS:1 COG:moeB KEGG:ns NR:ns ## COG: moeB COG0476 # Protein_GI_number: 16128794 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Escherichia coli K12 # 1 249 1 249 249 484 98.0 1e-137 MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLVVGLGGLGCAASQYLASAGVGNLTL LDFDTVSLSNLQRQTLHSDATVGQPKVESARDALARINPHIAITPVNALLDDAELAAMIA EHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFTYQDGEPCYRCLSRLF GENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAGYGKPASGKIVMYDAMTCQFREMKLMR NPGCEVCGQ >gi|299856444|gb|ADWV01000007.1| GENE 179 182768 - 183436 886 222 aa, chain - ## HITS:1 COG:ECs0903 KEGG:ns NR:ns ## COG: ECs0903 COG0176 # Protein_GI_number: 15830157 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 222 23 244 244 397 98.0 1e-111 MVMELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLEVVLPELHEAMGGQGRLFA QVMATTAEGMVNDARKLRSIIADIVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGL LSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQAKVLAASFKTPRQALDCLL AGCESITLPLDVAQQMISYPAVEAAVAKFEQDWLGAFGRTSI >gi|299856444|gb|ADWV01000007.1| GENE 180 183561 - 184460 963 299 aa, chain + ## HITS:1 COG:ybiY KEGG:ns NR:ns ## COG: ybiY COG1180 # Protein_GI_number: 16128792 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli K12 # 1 299 10 308 308 596 99.0 1e-170 MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDLLYDARLCLEGCELCAK AAPEVIERALNGLLIHREKLTPEHFTALTDCCPTQALTVCGEVKSVEEIMTTVLRDKPFY DRSGGGLTLSGGEPFMQPEMATALLQASHEAGIHTAVETCLHVPWKYIAPSLPYIDLFLA DLKHVADAPFKQWTDGNAARVLDNLKKLAAAGKKIIIRVPLIQGFNADETSVKAITDFAA DELHVGEIHFLPYHTLGINKYHLLNLPYDAPEKPLDAPELLDFAQQYACQKGLTATLRG >gi|299856444|gb|ADWV01000007.1| GENE 181 184466 - 186898 2864 810 aa, chain + ## HITS:1 COG:ybiW KEGG:ns NR:ns ## COG: ybiW COG1882 # Protein_GI_number: 16128791 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 1 810 1 810 810 1689 99.0 0 MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHLDKPIPVRRALALAHHL ANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFAVSEENKRVL HELCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMTSGDAHLAVNFPLLLEKGLDG LREKVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSEHIERFAALAREMAATETRESRR DELLTIAENCDLIAHQPPQTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRD VELNQTLDREHAIELLHSCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGQPM DAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVI PEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLAALEGGRDATSGK VFLPQEKALSAGNFNNFDEVMDAWDTQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVD DCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFD GLTHEQLRQRLINGAPKYGNDDDTVDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAG TSSISANVPFGAQTMATPDGRKAHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGG VLLNQKLNPATLENESDKQKLMILLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDL VVRVAGYSAFFTALSPDAQDDIIARTEHML >gi|299856444|gb|ADWV01000007.1| GENE 182 187044 - 187859 880 271 aa, chain + ## HITS:1 COG:ybiV KEGG:ns NR:ns ## COG: ybiV COG0561 # Protein_GI_number: 16128790 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 1 271 1 271 271 544 99.0 1e-155 MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKD EISFVAENGALVYEHGNQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPE AFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGF GFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIK QIARYATDDNNHEGALNVIQAVLDNTSPFNS >gi|299856444|gb|ADWV01000007.1| GENE 183 188011 - 189276 1087 421 aa, chain + ## HITS:1 COG:no KEGG:B21_00805 NR:ns ## KEGG: B21_00805 # Name: ybiU # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 421 1 421 421 872 99.0 0 MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIATRVAEINALKAQGDAV WPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYK GPGDNFFGTLSASRPEIYPIYWSQAQMQARQSEEMANAQSFLNRLWTFESDGKQWFNPDV SVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPVYQRVFANVFNGNLAQYDPWHAAHR TEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYVLLRPLLDDVPED ELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGNVM YIPAAPMCEKNLAYAHKVKAALEKGASPGDFPREDYETNWEGRFTLADLNIHGKRALGMD V Prediction of potential genes in microbial genomes Time: Sun May 15 15:20:11 2011 Seq name: gi|299856443|gb|ADWV01000008.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont7.1, whole genome shotgun sequence Length of sequence - 163365 bp Number of predicted genes - 169, with homology - 167 Number of transcription units - 73, operones - 36 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 493 - 552 4.4 2 2 Op 1 3/0.652 + CDS 611 - 3685 2370 ## COG3250 Beta-galactosidase/beta-glucuronidase + Term 3693 - 3725 5.4 3 2 Op 2 4/0.261 + CDS 3737 - 4990 1296 ## COG0477 Permeases of the major facilitator superfamily 4 2 Op 3 . + CDS 5056 - 5667 258 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Term 5668 - 5704 3.5 5 3 Op 1 3/0.652 - CDS 5770 - 6924 1078 ## COG2807 Cyanate permease 6 3 Op 2 4/0.261 - CDS 6957 - 7427 788 ## COG1513 Cyanate lyase 7 3 Op 3 . - CDS 7458 - 8117 517 ## COG0288 Carbonic anhydrase - Prom 8210 - 8269 3.5 + Prom 8142 - 8201 5.4 8 4 Tu 1 . + CDS 8227 - 9126 490 ## COG0583 Transcriptional regulator 9 5 Op 1 6/0.087 - CDS 9166 - 10449 1358 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 10 5 Op 2 2/0.739 - CDS 10439 - 11698 1469 ## COG1457 Purine-cytosine permease and related proteins - Prom 11736 - 11795 5.6 - Term 11850 - 11878 -1.0 11 6 Op 1 4/0.261 - CDS 11935 - 13821 1986 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 12 6 Op 2 8/0.000 - CDS 13861 - 15312 1610 ## COG2079 Uncharacterized protein involved in propionate catabolism 13 6 Op 3 9/0.000 - CDS 15346 - 16515 1242 ## COG0372 Citrate synthase 14 6 Op 4 . - CDS 16560 - 17450 1016 ## COG2513 PEP phosphonomutase and related enzymes - Prom 17534 - 17593 4.8 + Prom 17512 - 17571 4.7 15 7 Tu 1 . + CDS 17689 - 19275 1567 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain + Term 19278 - 19323 2.7 16 8 Tu 1 . - CDS 19373 - 19648 370 ## ECUMN_0373 hypothetical protein - Prom 19770 - 19829 4.5 + Prom 19490 - 19549 6.3 17 9 Tu 1 . + CDS 19798 - 20466 484 ## COG1280 Putative threonine efflux protein + Term 20593 - 20626 -0.4 - TRNA 20718 - 20798 28.4 # Pseudo ??? 0 0 18 10 Tu 1 . - CDS 21140 - 21955 410 ## ECO111_0365 hypothetical protein - Prom 21982 - 22041 5.4 - Term 21982 - 22022 1.1 19 11 Op 1 2/0.739 - CDS 22198 - 23247 1079 ## COG1064 Zn-dependent alcohol dehydrogenases 20 11 Op 2 11/0.000 - CDS 23334 - 24290 829 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 21 11 Op 3 21/0.000 - CDS 24287 - 25258 955 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 22 11 Op 4 16/0.000 - CDS 25251 - 26735 190 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 - Term 26744 - 26774 3.0 23 11 Op 5 1/0.870 - CDS 26784 - 27767 1087 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 27848 - 27907 4.8 24 12 Tu 1 . - CDS 28021 - 28431 227 ## COG4405 Uncharacterized protein conserved in bacteria - Prom 28623 - 28682 5.9 25 13 Op 1 3/0.652 - CDS 28730 - 30112 1518 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 26 13 Op 2 . - CDS 30122 - 31072 1170 ## COG0549 Carbamate kinase - Prom 31146 - 31205 7.4 - Term 31171 - 31208 3.0 27 14 Op 1 . - CDS 31215 - 32633 1737 ## ECO103_0299 hypothetical protein 28 14 Op 2 . - CDS 32633 - 34180 2040 ## COG0074 Succinyl-CoA synthetase, alpha subunit 29 14 Op 3 . - CDS 34170 - 35033 401 ## EC55989_0322 hypothetical protein 30 14 Op 4 . - CDS 35073 - 35678 637 ## COG0666 FOG: Ankyrin repeat - Prom 35712 - 35771 4.0 31 15 Op 1 . + CDS 35936 - 36433 477 ## B21_00276 hypothetical protein 32 15 Op 2 . + CDS 36525 - 37457 906 ## COG0583 Transcriptional regulator 33 16 Tu 1 . - CDS 37499 - 38587 800 ## COG2200 FOG: EAL domain - Term 38657 - 38709 5.1 34 17 Tu 1 . - CDS 38729 - 42778 2929 ## COG3468 Type V secretory pathway, adhesin AidA 35 18 Tu 1 . - CDS 43285 - 45318 2372 ## COG1292 Choline-glycine betaine transporter - Prom 45370 - 45429 3.0 + Prom 45301 - 45360 5.0 36 19 Op 1 6/0.087 + CDS 45429 - 46034 535 ## COG1309 Transcriptional regulator 37 19 Op 2 10/0.000 + CDS 46048 - 47520 1619 ## COG1012 NAD-dependent aldehyde dehydrogenases 38 19 Op 3 . + CDS 47534 - 49204 1706 ## COG2303 Choline dehydrogenase and related flavoproteins 39 20 Tu 1 . - CDS 49223 - 49474 84 ## EcHS_A0369 hypothetical protein - Prom 49649 - 49708 9.8 40 21 Tu 1 . - CDS 49893 - 50054 90 ## + Prom 50582 - 50641 3.0 41 22 Tu 1 . + CDS 50684 - 50842 93 ## COG0582 Integrase + Prom 51028 - 51087 5.7 42 23 Op 1 . + CDS 51153 - 51290 73 ## UTI89_C0337 hypothetical protein 43 23 Op 2 . + CDS 51256 - 51966 256 ## COG2771 DNA-binding HTH domain-containing proteins 44 23 Op 3 . + CDS 51963 - 52103 58 ## gi|227884674|ref|ZP_04002479.1| hypothetical protein HMPREF0358_1266 + Term 52293 - 52338 1.9 + Prom 52467 - 52526 2.0 45 24 Op 1 . + CDS 52558 - 52881 184 ## ECSE_0328 hypothetical protein 46 24 Op 2 . + CDS 52923 - 55220 1608 ## COG3468 Type V secretory pathway, adhesin AidA + Term 55298 - 55328 0.4 47 25 Op 1 . + CDS 55404 - 56069 152 ## EC55989_0312 conserved hypothetical protein; putative inner membrane protein 48 25 Op 2 . + CDS 56044 - 56241 62 ## EC55989_0311 hypothetical protein + Term 56422 - 56465 1.0 - Term 56163 - 56201 8.8 49 26 Op 1 13/0.000 - CDS 56315 - 57010 613 ## COG1556 Uncharacterized conserved protein 50 26 Op 2 17/0.000 - CDS 57003 - 58430 1105 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain 51 26 Op 3 3/0.652 - CDS 58441 - 59160 561 ## COG0247 Fe-S oxidoreductase - Prom 59226 - 59285 3.4 52 27 Tu 1 . - CDS 59690 - 60544 311 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 60654 - 60713 7.1 + Prom 60595 - 60654 5.3 53 28 Op 1 . + CDS 60701 - 60937 68 ## SSON_0321 hypothetical protein 54 28 Op 2 . + CDS 60949 - 61542 612 ## COG3059 Predicted membrane protein 55 29 Tu 1 . - CDS 61702 - 62571 725 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 62632 - 62691 3.2 + Prom 62710 - 62769 3.0 56 30 Op 1 8/0.000 + CDS 62820 - 63128 150 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 63156 - 63215 3.4 57 30 Op 2 . + CDS 63324 - 63677 208 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 63734 - 63774 8.4 - Term 63713 - 63775 9.6 58 31 Tu 1 . - CDS 63798 - 68051 2996 ## EC55989_0302 putative adhesin - Prom 68258 - 68317 7.3 + Prom 68986 - 69045 4.4 59 32 Tu 1 . + CDS 69146 - 69247 92 ## 60 33 Op 1 6/0.087 + CDS 69607 - 69873 457 ## PROTEIN SUPPORTED gi|191165768|ref|ZP_03027607.1| 50S ribosomal protein L31 type B 61 33 Op 2 . + CDS 69870 - 70013 241 ## PROTEIN SUPPORTED gi|26246304|ref|NP_752343.1| 50S ribosomal protein L36 + Term 70039 - 70076 2.8 + Prom 70895 - 70954 6.1 62 34 Op 1 . + CDS 71098 - 71640 199 ## COG2771 DNA-binding HTH domain-containing proteins 63 34 Op 2 . + CDS 71715 - 72302 670 ## JW0287 conserved hypothetical protein + Term 72319 - 72351 3.0 64 35 Op 1 . + CDS 72360 - 73028 534 ## APECO1_1705 hypothetical protein 65 35 Op 2 . + CDS 73054 - 75579 1817 ## ECO103_0268 putative outer membrane usher protein 66 35 Op 3 . + CDS 75593 - 77212 940 ## ECIAI1_0291 putative surface or exported protein 67 35 Op 4 . + CDS 77181 - 77891 428 ## ECSE_0307 hypothetical protein + Term 78139 - 78179 3.2 - Term 78732 - 78761 -0.9 68 36 Tu 1 . - CDS 78781 - 79395 316 ## COG3477 Predicted periplasmic/secreted protein - Prom 79450 - 79509 5.5 69 37 Op 1 15/0.000 + CDS 79813 - 80502 470 ## COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 70 37 Op 2 12/0.000 + CDS 80499 - 81314 453 ## COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 71 37 Op 3 6/0.087 + CDS 81516 - 83714 1770 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 72 37 Op 4 2/0.739 + CDS 83724 - 84680 502 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 73 37 Op 5 2/0.739 + CDS 84659 - 85069 298 ## COG0583 Transcriptional regulator + Term 85314 - 85359 5.1 74 38 Op 1 6/0.087 + CDS 85884 - 86276 220 ## COG2963 Transposase and inactivated derivatives 75 38 Op 2 5/0.130 + CDS 86273 - 86623 173 ## PROTEIN SUPPORTED gi|148984516|ref|ZP_01817804.1| 50S ribosomal protein L9 76 38 Op 3 . + CDS 86643 - 88214 846 ## COG3436 Transposase and inactivated derivatives + Term 88285 - 88322 -0.2 - Term 88409 - 88439 2.6 77 39 Tu 1 . - CDS 88454 - 88786 395 ## JW1558 hypothetical protein + Prom 89481 - 89540 5.1 78 40 Tu 1 . + CDS 89566 - 90339 350 ## COG3680 Uncharacterized protein conserved in bacteria - Term 90350 - 90394 6.2 79 41 Tu 1 . - CDS 90397 - 90951 365 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 90971 - 91030 1.9 + Prom 90957 - 91016 2.3 80 42 Tu 1 . + CDS 91161 - 91490 122 ## Dd1591_4025 tail collar domain protein + Prom 91503 - 91562 4.1 81 43 Tu 1 . + CDS 91751 - 92095 99 ## COG5525 Bacteriophage tail assembly protein + Term 92102 - 92152 6.1 - Term 91854 - 91897 3.2 82 44 Op 1 . - CDS 92067 - 92486 275 ## COG5525 Bacteriophage tail assembly protein 83 44 Op 2 . - CDS 92492 - 93130 341 ## JW1140 hypothetical protein 84 44 Op 3 2/0.739 - CDS 93134 - 93718 352 ## COG3778 Uncharacterized protein conserved in bacteria 85 44 Op 4 4/0.261 - CDS 93709 - 94767 774 ## COG3299 Uncharacterized homolog of phage Mu protein gp47 86 44 Op 5 5/0.130 - CDS 94754 - 95179 366 ## COG4381 Mu-like prophage protein gp46 87 44 Op 6 4/0.261 - CDS 95179 - 95727 612 ## COG4384 Mu-like prophage protein gp45 88 44 Op 7 . - CDS 95727 - 96806 852 ## COG4379 Mu-like prophage tail protein gpP 89 44 Op 8 . - CDS 96803 - 97423 427 ## UTI89_C2969 bacteriophage V tail/DNA circulation protein 90 44 Op 9 . - CDS 97443 - 97739 394 ## COG4386 Mu-like prophage tail sheath protein gpL 91 44 Op 10 . - CDS 97723 - 97893 64 ## ECUMN_0899 hypothetical protein 92 44 Op 11 . - CDS 97902 - 98189 183 ## ECUMN_0898 hypothetical protein 93 45 Op 1 . - CDS 98319 - 98645 259 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 94 45 Op 2 . - CDS 98642 - 99295 559 ## ECS88_0548 putative phage AdoMet-dependent methyltransferase 95 45 Op 3 . - CDS 99295 - 99783 186 ## ECS88_2902 conserved hypothetical protein; CPS-53 (KpLE1) prophage 96 45 Op 4 . - CDS 99786 - 100727 450 ## SeSA_A4446 phage O protein family 97 45 Op 5 . - CDS 100717 - 100896 127 ## gi|193066827|ref|ZP_03047826.1| conserved hypothetical protein - Term 100913 - 100954 5.1 98 46 Op 1 . - CDS 101072 - 101623 352 ## EFER_0584 putative nucleic acid-binding protein; E14 prophage 99 46 Op 2 . - CDS 101616 - 101876 126 ## COG1396 Predicted transcriptional regulators - Prom 102091 - 102150 4.3 100 47 Tu 1 . + CDS 101974 - 102666 454 ## COG2932 Predicted transcriptional regulator + Term 102687 - 102715 1.0 + Prom 102719 - 102778 5.2 101 48 Tu 1 . + CDS 103006 - 103212 216 ## ECUMN_0866 conserved hypothetical protein from phage origin + Term 103294 - 103330 -0.3 - Term 103065 - 103102 3.0 102 49 Tu 1 . - CDS 103184 - 103618 159 ## EFER_0579 hypothetical protein from phage origin - Prom 103643 - 103702 2.5 + Prom 103890 - 103949 1.8 103 50 Op 1 . + CDS 104087 - 104449 516 ## EFER_0577 hypothetical protein 104 50 Op 2 . + CDS 104515 - 105339 836 ## COG5532 Uncharacterized conserved protein + Term 105343 - 105395 2.1 + Prom 105367 - 105426 2.5 105 51 Op 1 . + CDS 105467 - 106003 398 ## COG1896 Predicted hydrolases of HD superfamily 106 51 Op 2 . + CDS 105994 - 106356 281 ## EFER_0574 conserved hypothetical protein; CPS-53 (KpLE1) prophage 107 51 Op 3 . + CDS 106356 - 106661 346 ## SF0298 hypothetical protein + Term 106672 - 106708 -0.0 + Prom 107296 - 107355 2.0 108 52 Tu 1 . + CDS 107383 - 108051 -35 ## COG0582 Integrase - TRNA 108066 - 108141 91.5 # Thr CGT 0 0 109 53 Op 1 22/0.000 - CDS 108256 - 109509 1505 ## COG0014 Gamma-glutamyl phosphate reductase 110 53 Op 2 . - CDS 109521 - 110624 1126 ## COG0263 Glutamate 5-kinase - Prom 110776 - 110835 8.4 + Prom 110769 - 110828 5.8 111 54 Tu 1 . + CDS 110912 - 111967 1131 ## COG3203 Outer membrane protein (porin) + Term 111975 - 112009 6.0 112 55 Op 1 . - CDS 112006 - 112407 592 ## SSON_0282 DNA-binding transcriptional regulator Crl 113 55 Op 2 6/0.087 - CDS 112465 - 113709 1142 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 113735 - 113794 3.4 - Term 113756 - 113794 9.1 114 56 Tu 1 . - CDS 113801 - 114259 619 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 114319 - 114378 3.2 + Prom 114369 - 114428 3.6 115 57 Tu 1 . + CDS 114520 - 115977 1873 ## COG2195 Di- and tripeptidases + Term 115990 - 116033 8.3 - Term 115749 - 115792 0.1 116 58 Op 1 5/0.130 - CDS 116034 - 116648 433 ## COG1186 Protein chain release factor B 117 58 Op 2 2/0.739 - CDS 116645 - 117784 845 ## COG1690 Uncharacterized conserved protein - Prom 117852 - 117911 3.2 118 59 Op 1 1/0.870 - CDS 118030 - 118404 287 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 119 59 Op 2 2/0.739 - CDS 118479 - 119534 1038 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 120 59 Op 3 19/0.000 - CDS 119605 - 120528 825 ## COG1360 Flagellar motor protein 121 59 Op 4 1/0.870 - CDS 120531 - 121394 1201 ## COG1291 Flagellar motor component 122 59 Op 5 . - CDS 121407 - 122123 900 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit 123 59 Op 6 . - CDS 122143 - 122610 445 ## ECO111_0291 putative lateral flagellar biogenesis protein 124 59 Op 7 . - CDS 122618 - 123679 879 ## COG3144 Flagellar hook-length control protein 125 59 Op 8 . - CDS 123676 - 123987 194 ## ECUMN_0288 Lateral flagellar chaperone protein (FliT-like) 126 59 Op 9 15/0.000 - CDS 123992 - 124384 398 ## COG1516 Flagellin-specific chaperone FliS 127 59 Op 10 3/0.652 - CDS 124407 - 125723 1314 ## COG1345 Flagellar capping protein - Prom 125766 - 125825 3.7 - Term 125846 - 125882 7.6 128 60 Tu 1 . - CDS 125930 - 126844 1032 ## COG1344 Flagellin and related hook-associated proteins - Prom 126903 - 126962 5.6 129 61 Tu 1 . + CDS 127330 - 128172 397 ## COG3710 DNA-binding winged-HTH domains - Term 128175 - 128220 4.6 130 62 Op 1 . - CDS 128227 - 129204 879 ## ECO26_0278 putative lateral flagellar hook associated protein 131 62 Op 2 21/0.000 - CDS 129221 - 130150 1050 ## COG1344 Flagellin and related hook-associated proteins 132 62 Op 3 9/0.000 - CDS 130165 - 131541 1553 ## COG1256 Flagellar hook-associated protein 133 62 Op 4 7/0.043 - CDS 131730 - 132029 331 ## COG3951 Rod binding protein 134 62 Op 5 9/0.000 - CDS 132029 - 133129 1234 ## COG1706 Flagellar basal-body P-ring protein 135 62 Op 6 9/0.000 - CDS 133144 - 133809 550 ## COG2063 Flagellar basal body L-ring protein 136 62 Op 7 8/0.000 - CDS 133892 - 134677 993 ## COG4786 Flagellar basal body rod protein 137 62 Op 8 8/0.000 - CDS 134704 - 135441 897 ## COG4787 Flagellar basal body rod protein 138 62 Op 9 16/0.000 - CDS 135441 - 136643 1249 ## COG1749 Flagellar hook protein FlgE - Prom 136666 - 136725 2.9 139 62 Op 10 9/0.000 - CDS 136728 - 137441 808 ## COG1843 Flagellar hook capping protein 140 62 Op 11 24/0.000 - CDS 137441 - 137872 582 ## COG1558 Flagellar basal body rod protein 141 62 Op 12 . - CDS 137875 - 138210 269 ## COG1815 Flagellar basal body protein + Prom 138028 - 138087 2.9 142 63 Op 1 . + CDS 138292 - 139029 537 ## COG1261 Flagellar basal body P-ring biosynthesis protein 143 63 Op 2 . + CDS 139110 - 139388 321 ## EcSMS35_0261 lateral flagellar anti-sigma factor 28 protein LfgM 144 63 Op 3 . + CDS 139401 - 139829 390 ## EcolC_3374 hypothetical protein + Term 139847 - 139882 0.1 145 64 Tu 1 . + CDS 139956 - 140885 775 ## ECO111_0268 putative lateral flagellar associated protein + Prom 140914 - 140973 4.3 146 65 Tu 1 . + CDS 141064 - 143508 1961 ## COG3306 Glycosyltransferase involved in LPS biosynthesis 147 66 Op 1 . - CDS 143626 - 144021 339 ## COG0615 Cytidylyltransferase 148 66 Op 2 . - CDS 144024 - 144458 438 ## EcolC_3378 flagellar export protein FliJ 149 66 Op 3 13/0.000 - CDS 144461 - 145798 1328 ## COG1157 Flagellar biosynthesis/type III secretory pathway ATPase 150 66 Op 4 15/0.000 - CDS 145791 - 146501 864 ## COG1317 Flagellar biosynthesis/type III secretory pathway protein 151 66 Op 5 19/0.000 - CDS 146504 - 147514 1266 ## COG1536 Flagellar motor switch protein 152 66 Op 6 9/0.000 - CDS 147492 - 149138 1709 ## COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein 153 66 Op 7 2/0.739 - CDS 149143 - 149484 376 ## COG1677 Flagellar hook-basal body protein 154 66 Op 8 . - CDS 149499 - 150485 942 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - Prom 150561 - 150620 9.8 + Prom 150718 - 150777 7.4 155 67 Op 1 . + CDS 150872 - 151723 841 ## ECO111_0258 putative lateral flagellar export/assembly protein 156 67 Op 2 2/0.739 + CDS 151716 - 152087 473 ## COG1886 Flagellar motor switch/type III secretory pathway protein 157 67 Op 3 . + CDS 152084 - 152914 1016 ## COG1338 Flagellar biosynthesis pathway, component FliP 158 67 Op 4 10/0.000 + CDS 152943 - 153698 827 ## COG1684 Flagellar biosynthesis pathway, component FliR 159 67 Op 5 13/0.000 + CDS 153688 - 154827 1218 ## COG1377 Flagellar biosynthesis pathway, component FlhB 160 67 Op 6 . + CDS 154811 - 156904 2375 ## COG1298 Flagellar biosynthesis pathway, component FlhA + Prom 156924 - 156983 2.1 161 68 Op 1 . + CDS 157009 - 157287 185 ## ECIAI1_0269 hypothetical protein 162 68 Op 2 . + CDS 157280 - 157636 260 ## COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters + Term 157641 - 157677 7.2 - Term 157629 - 157663 5.6 163 69 Tu 1 . - CDS 157693 - 158319 350 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - Prom 158511 - 158570 9.5 + Prom 158561 - 158620 7.8 164 70 Op 1 9/0.000 + CDS 158651 - 158911 392 ## COG3077 DNA-damage-inducible protein J 165 70 Op 2 3/0.652 + CDS 158914 - 159192 143 ## COG3041 Uncharacterized protein conserved in bacteria + Prom 159208 - 159267 3.0 166 71 Tu 1 . + CDS 159348 - 160088 836 ## COG3034 Uncharacterized protein conserved in bacteria + Term 160099 - 160132 2.1 - Term 159958 - 160014 7.6 167 72 Op 1 . - CDS 160059 - 160826 622 ## COG0121 Predicted glutamine amidotransferase - Prom 160940 - 160999 2.4 - Term 160833 - 160863 1.7 168 72 Op 2 . - CDS 161032 - 161610 782 ## COG0279 Phosphoheptose isomerase - Prom 161642 - 161701 4.2 + Prom 161704 - 161763 3.2 169 73 Tu 1 . + CDS 161850 - 163365 1804 ## COG1960 Acyl-CoA dehydrogenases Predicted protein(s) >gi|299856443|gb|ADWV01000008.1| GENE 1 3 - 488 411 161 aa, chain + ## HITS:1 COG:lacI KEGG:ns NR:ns ## COG: lacI COG1609 # Protein_GI_number: 16128330 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 161 200 360 360 302 100.0 2e-82 GWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITE SGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLL PVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLESGQ >gi|299856443|gb|ADWV01000008.1| GENE 2 611 - 3685 2370 1024 aa, chain + ## HITS:1 COG:lacZ KEGG:ns NR:ns ## COG: lacZ COG3250 # Protein_GI_number: 16128329 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli K12 # 1 1024 1 1024 1024 2085 99.0 0 MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWR FAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENP TGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRA GENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAV LEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGSYADRVTLRLNVENPK LWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEH HPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHG MVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVD PSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYA HAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDR QFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALD GKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQ WRLAENLSVTLPSASHIIPQLTTSETDFCIELGNKRWQFNRQSGLLSQMWIGDKKQLLTP LRDQFTRAPLDNDIGVSEATRIDPNAWVERWKATGHYQAEAALLQCTADTLADAVLITTA HAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLTCQLAQVAERVNWLG LGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNI SRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLV WCQK >gi|299856443|gb|ADWV01000008.1| GENE 3 3737 - 4990 1296 417 aa, chain + ## HITS:1 COG:lacY KEGG:ns NR:ns ## COG: lacY COG0477 # Protein_GI_number: 16128328 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 417 1 417 417 687 100.0 0 MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQ PLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNA GAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALCASIVGIMFTINNQFVFWLGSGCALIL AVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFD QQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMS VRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQL AMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA >gi|299856443|gb|ADWV01000008.1| GENE 4 5056 - 5667 258 203 aa, chain + ## HITS:1 COG:ECs0395 KEGG:ns NR:ns ## COG: ECs0395 COG0110 # Protein_GI_number: 15829649 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli O157:H7 # 1 203 1 203 203 404 97.0 1e-113 MNMSMTERIKAGKLFTDMCEGLPEKRLRGKTLMYEFNHSHPSEVEKRESLIKEMFATVGE NAWIEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHE LRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSVVIKDIPPNVVAAGVPCR VIREINDRDKQYYFRDYKVESSV >gi|299856443|gb|ADWV01000008.1| GENE 5 5770 - 6924 1078 384 aa, chain - ## HITS:1 COG:cynX KEGG:ns NR:ns ## COG: cynX COG2807 # Protein_GI_number: 16128326 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Escherichia coli K12 # 1 384 1 384 384 587 98.0 1e-167 MLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQ HVSERRSVAISLLLIAVGALMRELYPQSVLLLSSALLGGVGIGIIQAVMPSVIKRRFQQR TPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVA SSHKTTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALM TLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLWAMVCGLGLGGA FPLCLLLALDHSAQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALC VVGLMIITLRFAPARFPQLWVKEA >gi|299856443|gb|ADWV01000008.1| GENE 6 6957 - 7427 788 156 aa, chain - ## HITS:1 COG:cynS KEGG:ns NR:ns ## COG: cynS COG1513 # Protein_GI_number: 16128325 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate lyase # Organism: Escherichia coli K12 # 1 156 1 156 156 290 99.0 9e-79 MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARL VGAKLDLDEDAILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGI ISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF >gi|299856443|gb|ADWV01000008.1| GENE 7 7458 - 8117 517 219 aa, chain - ## HITS:1 COG:ZcynT KEGG:ns NR:ns ## COG: ZcynT COG0288 # Protein_GI_number: 15800068 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Escherichia coli O157:H7 EDL933 # 1 219 1 219 219 429 100.0 1e-120 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVI RNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQCMDHMPAVS HWLRYADSARVVNEARPHSDLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGW VYDIESGSIAAFDGATRQFVPLAANPRVCAIPLRQPTAA >gi|299856443|gb|ADWV01000008.1| GENE 8 8227 - 9126 490 299 aa, chain + ## HITS:1 COG:ECs0391 KEGG:ns NR:ns ## COG: ECs0391 COG0583 # Protein_GI_number: 15829645 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 545 98.0 1e-155 MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDA GEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPGI TLQLQEMSQEKIEDLLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAACEQ VALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLL PAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALEECADVGENESR >gi|299856443|gb|ADWV01000008.1| GENE 9 9166 - 10449 1358 427 aa, chain - ## HITS:1 COG:ECs0390 KEGG:ns NR:ns ## COG: ECs0390 COG0402 # Protein_GI_number: 15829644 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 1 427 1 427 427 879 99.0 0 MSNNALQTIINARLPGKEGLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVE PHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHV RTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADV VGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHREGMG ARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVK EMLESGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSAR TLNLQDYGIAAGNSANLIILPAENGFDALRRQVPVRYSVRGGKVIASTQPAQTTVYLEQP EAIDYKR >gi|299856443|gb|ADWV01000008.1| GENE 10 10439 - 11698 1469 419 aa, chain - ## HITS:1 COG:codB KEGG:ns NR:ns ## COG: codB COG1457 # Protein_GI_number: 16128321 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Escherichia coli K12 # 1 419 1 419 419 671 99.0 0 MSQDNNFSQGPVPQSARKGVLALTFVMLGLTFFSASMWTGGTLGTGLSYHDFFLAVLIGN LLLGIYTSFLGYIGAKTGLTTHLLARFSFGVKGSWLPSLLLGGTQVGWFGVGVAMFAIPV GKATGLDINLLIAVSGLLMTVTVFFGISALTVLSVIAVPAIACLGGYSVWLAVNGMGGLD ALKAVVPAQPLDFNVALALVVGSFISAGTLTADFVRFGRNAKLAVLVAMVAFFLGNSLMF IFGAAGAAALGMADISDVMIAQGLLLPAIVVLGLNIWTTNDNALYASGLGFANITGMSSK TLSVINGIIGTVCALWLYNNFVGWLTFLSAAIPPVGGVIIADYLMNRRRYEHFATTRMMS VNWVAILAVALGIAAGHWLPGIVPVNAVLGGALSYLILNPILNRKTTAAMTHVEVNSVE >gi|299856443|gb|ADWV01000008.1| GENE 11 11935 - 13821 1986 628 aa, chain - ## HITS:1 COG:ECs0388 KEGG:ns NR:ns ## COG: ECs0388 COG0365 # Protein_GI_number: 15829642 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Escherichia coli O157:H7 # 1 628 1 628 628 1275 99.0 0 MSFSEFYQRSINEPEQFWAEQARRIDWQTHFTQTLDHSNPPFARWFCEGRTNLCHNAIDR WLEKQPEALALIAVSSETEEERTFTFRQLHDEVNAVASMLRSLGVQRGDRVLVYMPMIAE AHITLLACARIGAIHSVVFGGFASHSVAARIDDAKPVLIVSADAGARGGKIIPYKKLLDD AISQAQHQPRHVLLVDRGLAKMARVSGRDVDFASLRYQHIGARVPVAWLESNETSCILYT SGTTGKPKGVQRDVGGYAVALATSMDTIFGGKAGSVFFCASDIGWVVGHSYIVYAPLLAG MATIVYEGLPTWPDCGVWWKIVEKYQVSRMFSAPTAIRVLKKFPTAEIRKHDLSSLEVLY LAGEPLDEPTASWVSNTLDVPVIDNYWQTESGWPIMAIARGLDDRPTRLGSPGVPMYGYN VQLLNEVTGEPCGVNEKGMLVVEGPLPPGCIQTIWGDDDRFVKTYWSLFSRPVYATFDWG IRDADGYHFILGRTDDVINVAGHRLGTREIEESISSHPGVAEVAVVGVKDALKGQVAVAF VIPKESDSLEDRDVAHSQEKAIMALVDSQIGNFGRPAHVWFVSQLPKTRSGKMLRRTIQA ICEGRDPGDLTTIDDPASLDQIRQAMEE >gi|299856443|gb|ADWV01000008.1| GENE 12 13861 - 15312 1610 483 aa, chain - ## HITS:1 COG:ECs0387 KEGG:ns NR:ns ## COG: ECs0387 COG2079 # Protein_GI_number: 15829641 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in propionate catabolism # Organism: Escherichia coli O157:H7 # 1 483 1 483 483 1006 99.0 0 MSAQINNIRPEFDREIVDIVDYVMNYEISSKVAYDTAHYCLLDTLGCGLEALEYPACKKL LGPIVPGTVVPNGVRVPGTQFQLDPVQAAFNIGAMIRWLDFNDTWLAAEWGHPSDNLGGI LATADWLSRNAVASGKAPLTMKQVLTGMIKAHEIQGCIALENSFNRVGLDHVLLVKVAST AVVAEMLGLTREEILNAVSLAWVDGQSLRTYRHAPNTGTRKSWAAGDATSRAVRLALMAK TGEMGYPSALTAPVWGFYDVSFKGESFRFQRPYGSYVMENVLFKISFPAEFHSQTAVEAA MTLYEQMQAAGKTAADIEKVTIRTHEACIRIIDKKGPLNNPADRDHCIQYMVAIPLLFGR LTAADYEDNVAQDKRIDALREKINCFEDPAFTADYHDPEKRAIANAITLEFTDGTRFEEV VVEYPIGHARRRQDGIPKLVDKFKINLARQFPTRQQQRILEVSLDRTRLEQMPVNEYLDL YVI >gi|299856443|gb|ADWV01000008.1| GENE 13 15346 - 16515 1242 389 aa, chain - ## HITS:1 COG:ECs0386 KEGG:ns NR:ns ## COG: ECs0386 COG0372 # Protein_GI_number: 15829640 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Escherichia coli O157:H7 # 1 389 1 389 389 778 100.0 0 MSDTTILQNSTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAEHCEFEE VAHLLIHGKLPTRDELAAYKTKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCT LPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGE KPSQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSDMYSAIIGAIGALRGPKHGGANE VSLEIQQRYETPDEAEADIRKRVESKEVVIGFGHPVYTIADPRHQVIKRVAKQLSQEGGS LKMYNIADRLETVMWESKKMFPNLDWFSAVSYNMMGVPTEMFTPLFVIARVTGWAAHIIE QRQDNKIIRPSANYVGPEDRQFVALDKRQ >gi|299856443|gb|ADWV01000008.1| GENE 14 16560 - 17450 1016 296 aa, chain - ## HITS:1 COG:prpB KEGG:ns NR:ns ## COG: prpB COG2513 # Protein_GI_number: 16128316 # Func_class: G Carbohydrate transport and metabolism # Function: PEP phosphonomutase and related enzymes # Organism: Escherichia coli K12 # 1 296 1 296 296 560 99.0 1e-159 MSLHSPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLG ISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGA KRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEA GAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAF RAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDDLFARSQVK >gi|299856443|gb|ADWV01000008.1| GENE 15 17689 - 19275 1567 528 aa, chain + ## HITS:1 COG:ECs0384 KEGG:ns NR:ns ## COG: ECs0384 COG1221 # Protein_GI_number: 15829638 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 528 1 528 528 1028 99.0 0 MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLANE RCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKAGKLTSSIGVVTYQETIPALV AFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIYSAA TVRQAFSDALDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSA AVLIEGETGTGKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYEE GAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHQPVPVD VRVISATHCNLEEDMRQGQFRRDLFYRLSILRLQLPPLRERVADILPLAESFLKVSLAAL SAPFSAALRQGLQASETVLVHYDWPGNIRELRNMMERLALFLSVEPTPDLTPQFLQLLLP ELARESAKTPAPRLLTPQQALEKFNGDKTAAANYLGISRTTFWRRLKS >gi|299856443|gb|ADWV01000008.1| GENE 16 19373 - 19648 370 91 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0373 NR:ns ## KEGG: ECUMN_0373 # Name: yahO # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 91 1 91 91 134 98.0 1e-30 MKIISKMLVGALALAVTNVYAAELMTKAEFEKVESQYEKIGDISTSNEMSTADAKEDLIK KADEKGADVLVLTSGQTDNKIHGTANIYKKK >gi|299856443|gb|ADWV01000008.1| GENE 17 19798 - 20466 484 222 aa, chain + ## HITS:1 COG:yahN KEGG:ns NR:ns ## COG: yahN COG1280 # Protein_GI_number: 16128313 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli K12 # 1 222 2 223 223 399 98.0 1e-111 MKLLHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVA LGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAWCSMRRQSTPQMSTLQQPIS APWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTWARLMAWAGIVLASVIWRVFLS QAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYEGVTQR >gi|299856443|gb|ADWV01000008.1| GENE 18 21140 - 21955 410 271 aa, chain - ## HITS:1 COG:no KEGG:ECO111_0365 NR:ns ## KEGG: ECO111_0365 # Name: yahL # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 271 1 271 271 482 99.0 1e-135 MISLKAPHNNLMPYTQQSILNTVKNNQLPEDIKSSLVSCVDIFKVLIKQYYDYPYDCRDD LVDDDKLIHLMAAVRDCEWSDDNALTINVQFNDFPGFYDWMDYPDHPVKFVFRILENQKG TVWVYDQDDAFLDIKANVQAGRFTGLKKLVQFIDSVRTDCKCILLEHHMPLLRIFPKGKE CMRVEKWLREMSSIPETDAPIKQALAHGLLLHLKNIYPVFPESLVMLLLSVLDVKTYRDD ARLNEWISNRVQELGDRYYPVNKHVKIRYTL >gi|299856443|gb|ADWV01000008.1| GENE 19 22198 - 23247 1079 349 aa, chain - ## HITS:1 COG:ECs0379 KEGG:ns NR:ns ## COG: ECs0379 COG1064 # Protein_GI_number: 15829633 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli O157:H7 # 1 349 1 349 349 687 99.0 0 MKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP GHEIVGRVVAVGDQVEKHAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPD EPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGV VGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDF ILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPET QEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNRTLTD >gi|299856443|gb|ADWV01000008.1| GENE 20 23334 - 24290 829 318 aa, chain - ## HITS:1 COG:ECs0378 KEGG:ns NR:ns ## COG: ECs0378 COG1172 # Protein_GI_number: 15829632 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 491 99.0 1e-139 MKKSWRNNVEFYLIGLLVLTVAAFSITMPEIFWSISNFQSVASQMPVLGILALAMAVTML CGGINLSIIATANACSLVMAWVATQYPPGIATVVATLLAGAGAAVIIGLCNGVLIAGIRV SPILATLGMMTLLKGINILVTGGSAIANYPSWVLWLNHAQWFGIPLPMWLFAAVALGLWI LLEKTPLGKAIYLIGSNERATLYSGINTRRVLIWVYVISALLCAVAAFLMMSKLNSAKAS YGESYLLVSILAAVLGGVNPDGGSGRIIGMVLALFLLQIIESGFNILGISPYLTMALWGT LLLCFIQVRGMLGLDRVV >gi|299856443|gb|ADWV01000008.1| GENE 21 24287 - 25258 955 323 aa, chain - ## HITS:1 COG:ECs0377 KEGG:ns NR:ns ## COG: ECs0377 COG1172 # Protein_GI_number: 15829631 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 534 100.0 1e-151 MAELKKRHEFWLALLIVVLFVGLAWRSDEFLTFGNLYDLANNYAMLTILACGLFVVLISG GIDISFPAMTIIAQYGMVLLLQKIGGNFAVAFALAGCIGILLGLINALLVNRLRVPSIII TISTLNIFYGLLLWLSKGVWLYDFPPWFEQGVMLFKYTDADGYDYGLGLPLIAMITVVLL TAFIMNFTSVGRKIYALGGNRESASRIGFSVLKLQLFVYGYMGLMSGAAGVVQSWTVMTV APDSLLGYELTVLAAVVLGGTSLLGGRGTLTGTLLGVVLLAVMQNGLNLLGVSSYWQTLI TGIIIVASISATAWSQHQNRSLL >gi|299856443|gb|ADWV01000008.1| GENE 22 25251 - 26735 190 494 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 254 477 8 224 312 77 25 3e-13 METFLSLRHINKTFHATRALRDVSLDFMSGEVHCLAGQNGCGKSTLIKIMSGVYRPDEGA EITLGGKNWSKLTPAASVAQGIQVIYQDLSLFPNLSVWENIAVNHYHHGLFVNRRRLREV AQAAMTSINVTLPLDTLVSELSIARCQLVAICRALAQDARLIVMDEPTASLTHQEVQGLL QVVHQLRERGICVVFVSHRLEEVMEVSDRISVLKDGELVGTFPAAEMTTKQLGFLMTGQE FEYQVRELWQGKSSTPVLEVRNLSRHGEYLNINLRVEAGEVVSIVGLLGAGRTELCLSLF GMTRPDAGEILINGQPVTLHSNQDAIRHGIGYVSEDRMSRGLVMAQSIEDNIISTVFHKV KDRFGFLSETKVRDLVDRLIKALTIKVSDPHLPVNTLSGGNAQRVSIAKWLAIGPRLLIL DSPTVGVDIANKAGIYGIISDLAAHGIAVLMICDEIEEAWYQSHRILVMQKGQITHSFLP DSSSQARIAEVVNG >gi|299856443|gb|ADWV01000008.1| GENE 23 26784 - 27767 1087 327 aa, chain - ## HITS:1 COG:ECs0374 KEGG:ns NR:ns ## COG: ECs0374 COG1879 # Protein_GI_number: 15829628 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 327 2 328 328 627 99.0 1e-180 MNKRFVINMVSSLLLGAALISAPLQAAEKVVVNISKVDGMPWFNRMGEGVVEAGKAFGVN ASQVGPSSTDAPQQVKIIEDLIARKVNAITIVPNDANVLEPVFKKARDAGIVVLTNESPG QPSANWDIEIIDNEKFAAEYVEHMAKRMGGKGGYVIYVGSLTVPQHNLWADLLVKYQKEH YPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLKAVVSFGSNGPIGAGRAVKEKRAKNK VAVYGMMIPSQAASLIKSGDITEGITYDPASAGYALAAVASTLLKGEEIKPGLEMQNLGK ADVDMDKRIIRFHKVLLVNKDNIDSLY >gi|299856443|gb|ADWV01000008.1| GENE 24 28021 - 28431 227 136 aa, chain - ## HITS:1 COG:Z0414 KEGG:ns NR:ns ## COG: Z0414 COG4405 # Protein_GI_number: 15800048 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 136 1 136 136 279 99.0 8e-76 MTIKEKFSQKYPHASFCTFGDSAALADHLATLIATGVKTASCGSLAGCIEDNAFPMIGEY KIVENSRGEPVCVIRVIGLHLLRFSDVTVELARKEGEGDLSLEYWRNEHRRFFQAEGSYS PEMDVIFEEYALIDVV >gi|299856443|gb|ADWV01000008.1| GENE 25 28730 - 30112 1518 460 aa, chain - ## HITS:1 COG:yahJ KEGG:ns NR:ns ## COG: yahJ COG0402 # Protein_GI_number: 16128309 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 460 1 460 460 915 98.0 0 MKESNSRREFLSQSGKMVTAAALFGTSVPLAHAAVAGTLNCEANNTMKITDPHYYLDNVL LETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKQHPDATLPHYDAGGKLMLPTTRDM HIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTI ARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAH YVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPSGVAAINYMVETVEKTPQL KGKLTISHAFALATLNEQQVDALANRMAAQQISIASTVPIGTLHMPLKQLHDKGVKVMTG TDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKA QDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG >gi|299856443|gb|ADWV01000008.1| GENE 26 30122 - 31072 1170 316 aa, chain - ## HITS:1 COG:yahI KEGG:ns NR:ns ## COG: yahI COG0549 # Protein_GI_number: 16128308 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 1 316 1 316 316 578 98.0 1e-165 MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLD LRRAEIAHEREGLPLTPLANCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDK NDPGFAHPTKPIGAFFSESQRDKLQKANPDWCFVEDAGRGYRRVVASPEPKRIVEAPAIK ALIQQGFVVIGAGGGGIPVVRTEAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEK VCIHFGKPQQQALDRVDIATMTRYMQEGHFPPGSMLPKIIASLTFLEQGGKEVIITTPEC LPAALRGETGTHIIKT >gi|299856443|gb|ADWV01000008.1| GENE 27 31215 - 32633 1737 472 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0299 NR:ns ## KEGG: ECO103_0299 # Name: yahG # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 472 1 472 472 944 100.0 0 MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLAD KIAAANQQALERIIQSHPVLIGFDQAINVVPGMTPKTILHAGPPITWEKMCGAMKGAVTG ALVFEGLAKDLDEATELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNIAY TNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPMLRDAMKIIGEIDLRLMLAQALHMGDE CHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAH GIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAIT ETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAID ITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAILGWCERYGV >gi|299856443|gb|ADWV01000008.1| GENE 28 32633 - 34180 2040 515 aa, chain - ## HITS:1 COG:yahF KEGG:ns NR:ns ## COG: yahF COG0074 # Protein_GI_number: 16128305 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli K12 # 1 515 1 515 515 972 98.0 0 MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNKGVLKNLGLLTPELEQA KNGDLMIVINGKAGADNEQLLVEIEELFNSKAQSGSHEARYATIASAKKHIPESNLAVIS VNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAHEKGLLMMGPDCGTAIINGAA LCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAI GMLENDPQTEIIALISKPPAPAVARKVLERARACRKPVVVCFLGRVETPVDEQGLQFARG SKEAALKAVMLSGVKQENLDLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETMFAV MEKHGDVYSNIQPDPEFRLQDINRSIKHTFLDFGDDDFTNGKPHPMIDPTNRISRLIEEA RDPEVAVIVMDFVLGFGSHEDPVGSTIEAIKEAKAIAAAEGRELIILAYVLGTDLDTPSL EQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA >gi|299856443|gb|ADWV01000008.1| GENE 29 34170 - 35033 401 287 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0322 NR:ns ## KEGG: EC55989_0322 # Name: yahE # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 287 1 287 287 599 100.0 1e-170 MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEEYDNAPNSCRLALTHFD DLFRHGDKVQFDDQGITVGQHLHIEMSRCRRWLSPTLQMTAVNFHLIAWLQWHDIIHQHL GENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNEKQNIAAAVASMIGLGIGLTPSADD YLTGLALILFIPGHPSEKYKEEFYLGMQRGRNNTTLLSAITLEAALQQRCRENIHRFIHN IIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCALSQTYGGNYVS >gi|299856443|gb|ADWV01000008.1| GENE 30 35073 - 35678 637 201 aa, chain - ## HITS:1 COG:yahD KEGG:ns NR:ns ## COG: yahD COG0666 # Protein_GI_number: 16128303 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Escherichia coli K12 # 1 201 1 201 201 395 100.0 1e-110 MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALID AGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSI VKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTP LELARERGFEEIAQLLIAAGA >gi|299856443|gb|ADWV01000008.1| GENE 31 35936 - 36433 477 165 aa, chain + ## HITS:1 COG:no KEGG:B21_00276 NR:ns ## KEGG: B21_00276 # Name: yahC # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 165 1 165 165 252 100.0 3e-66 MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIRSLA VNYSGMVWAFFAALAAGWLASVSGLSAFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLG MTLFFASGMNWTVTLLGFLAGNCVGIISEYGGQKLSEATTKRDGY >gi|299856443|gb|ADWV01000008.1| GENE 32 36525 - 37457 906 310 aa, chain + ## HITS:1 COG:yahB KEGG:ns NR:ns ## COG: yahB COG0583 # Protein_GI_number: 16128301 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 310 1 310 310 632 99.0 0 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE LTESGRYFFRKATDLLNDFHAIKRSIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG IYQDLLHREN >gi|299856443|gb|ADWV01000008.1| GENE 33 37499 - 38587 800 362 aa, chain - ## HITS:1 COG:ZyahA_2 KEGG:ns NR:ns ## COG: ZyahA_2 COG2200 # Protein_GI_number: 15800038 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 EDL933 # 98 362 1 265 265 557 99.0 1e-158 MASHDLSVFLEEFGATVNLTLPGIVSEKERLLLKLLMEGMSVTEISQYRNRSAKTISHQK KQLYEKLGIQSDITFWRDIFFQYHPQVISGTGNKNNFYIPDNRCHHIVTPEAISLALENH EFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQT ADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVKKLGNDKIKLVLELTERNPIP VTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGH IVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKA GG >gi|299856443|gb|ADWV01000008.1| GENE 34 38729 - 42778 2929 1349 aa, chain - ## HITS:1 COG:ECs0362_2 KEGG:ns NR:ns ## COG: ECs0362_2 COG3468 # Protein_GI_number: 15829616 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 813 1349 1 537 537 895 99.0 0 MAFNALLFMQSWFYLDVLLEIVMNKIYRLKWNRSRNCWSVCSELGSRVKGKKSRAVLISA ISLYSSLVFADDVIVNQDKTIDFGKENQSIDYRITVTDNANLVINATDTSRPRLTLASGG GLDITGGKVTINGPLNFLLKGTGFLNVSNAGSELYADDLYESNSGMRHDRGYFNVSNGGK IHVKGTSRLTYLQGNVSGEGSQVNSKTFFMGVYGSYGGNQYLSVNNGGEVNAREHISLGY YDQRSDTTLVVSDGGKISAPKISLSTNSELALGAQEGSAAKAAGIIDAEKIEFVWAKTSD KKITLNHTDKNATISADIVSGSEGLGYINALNGTTYLTGDNSAFSGKVKIEQNGALGITQ NIGTAEINNRGKLHLKADDSMTFANKISGNGTISIDSGTVALTGNNYAFSGYIDVASGAV VVISEDKNIGRADLDVDGKLQINANKDWVFDNDLQGRGIVEINMGNHEFSFDEFAYTDWF QGSLAFQNTTFNLEKNAEFLQRGGITAGQGSQVIVGKGAHSISTLGFSGGTVDFGALTAG AQMTEGTVNVSKTLDLRGEGVIQVSDSDVVSSVSRDIDSALSLTEVDDGNSTIKLVDAQG AEVLGDAGNLQLQDKNGQILSSSAQRDIQQNGQKAAVGTYDYRLTSGVNNDGLYIGYGLT QLDLHATDSDALVLSSNGKSENAADLSAKITGSGDLAFSSQKGQTVSLSNKDNDYTGVTD LRSGTLLLNNDNVLGNTHELRLAAETELDMNGHSQTVGTLNGSADSLLSLNGGSLTVTNG GTSTGSLTGSGELNIQGGTLDIAGDNSNLTANVNIANSANVLVSHAQGLGSANVENNGTL ALNNSAEKRAAASVNYTLGGNLTNNGTLMTGMSGQQAGNVLVVKGNYHGNNGQLVMNTVL NSDDSVTDKLVVEGDTSGTTAVTVNNAGGTGAKTLNGIELIHVDGKSEGEFVQAGRIVAG AYDYTLARGQGANSGNWYLTSGSDSPELQPEPDPMPNPEPNPNPEPNPNPTPTPGPDLNV DNDLRPEAGSYIANIAAANTMFTTRLHERLGNTYYTDMVTGEQKQTSMWMRHEGGHNKWR DGSGQLKTQSNRYVLQLGGDVAQWSQNGSDSWHVGVMAGYGNSDSKTISSRTGYRAKASV NGYSTGLYATWYADDESRNGAYLDSWAQYSWFDNTVKGDDLQSESYKSKGFTASLEAGYK HKLAEFNGSQGTRNEWYVQPQAQVTWMGVKADKHRESNGTLVHSNGDGNVQTRLGVKTWL KSHHKMDDGKSREFQPFVEVNWLHNSKDFSTSMDGVSVTQDGARNIAEIKTGVEGQLNAN LNVWGNVGVQVADRGYNDTSAMVGIKWQF >gi|299856443|gb|ADWV01000008.1| GENE 35 43285 - 45318 2372 677 aa, chain - ## HITS:1 COG:ECs0360 KEGG:ns NR:ns ## COG: ECs0360 COG1292 # Protein_GI_number: 15829614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli O157:H7 # 1 677 1 677 677 1333 100.0 0 MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIGRTLDWVSKTFGWYYLL AATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQ YMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYP IFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIAL SVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFM GMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFT FTLLWLSVFGNSALYEIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLF YVTSADSGALVLGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLMTNGISALQNTTVI MGLPFSFVIFFVMAGLYKSLKVEDYRRESANRDTAPRPLGLQDRLSWKKRLSRLMNYPGT RYTKQMMETVCYPAMEEVAQELRLRGAYVELKSLPPEEGQQLGHLDLLVHMGEEQNFVYQ IWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNF IHLHREAPGHSVMFPDA >gi|299856443|gb|ADWV01000008.1| GENE 36 45429 - 46034 535 201 aa, chain + ## HITS:1 COG:ECs0359 KEGG:ns NR:ns ## COG: ECs0359 COG1309 # Protein_GI_number: 15829613 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 7 201 1 195 195 360 99.0 1e-99 MNGVAKMPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKN GLLEATMRDITSQLRDAVLNRLHALPQGSAEQRLQAIVGGNFDETQVSSAAMKAWLAFWA SSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPRQQAQEAGYGLAALIDGLWLRAALSGKP LDKPLAHSLTRHFITQHLPTD >gi|299856443|gb|ADWV01000008.1| GENE 37 46048 - 47520 1619 490 aa, chain + ## HITS:1 COG:betB KEGG:ns NR:ns ## COG: betB COG1012 # Protein_GI_number: 16128297 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 490 1 490 490 957 99.0 0 MSRMAEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIW AAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLI PALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEV TPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMAN SAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKA AFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKG DGFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSLLTYESEDEVIRRANDTDYGLAAGIV TADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQ VEMAKFQSIF >gi|299856443|gb|ADWV01000008.1| GENE 38 47534 - 49204 1706 556 aa, chain + ## HITS:1 COG:betA KEGG:ns NR:ns ## COG: betA COG2303 # Protein_GI_number: 16128296 # Func_class: E Amino acid transport and metabolism # Function: Choline dehydrogenase and related flavoproteins # Organism: Escherichia coli K12 # 1 556 1 556 556 1167 99.0 0 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY NWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLD CLPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQ QEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDGKRAVGVEWLEG DSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHL EMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNI QYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQD WQEFRDAIRITREIMHQPALDQYRGREISPGTECQTDEQLDEFVRNHAETAFHPCGTCKM GYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPRS TAGYFVANGMPVRAKK >gi|299856443|gb|ADWV01000008.1| GENE 39 49223 - 49474 84 83 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A0369 NR:ns ## KEGG: EcHS_A0369 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 83 1 83 83 148 100.0 6e-35 MLTVSGSEQVTIARNTSGVILKLSGISPAVYQCIHSTFISQIERVRLEFAGEVVTMKHES YPYVLYNDSVPIPGTVTLNQIGS >gi|299856443|gb|ADWV01000008.1| GENE 40 49893 - 50054 90 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNYRAWGMCVTSNLLVMFSSFEIFDVISYEVVFIIILLILYAFCRSVKLGCRK >gi|299856443|gb|ADWV01000008.1| GENE 41 50684 - 50842 93 52 aa, chain + ## HITS:1 COG:ECs0354 KEGG:ns NR:ns ## COG: ECs0354 COG0582 # Protein_GI_number: 15829608 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 52 1 52 52 102 100.0 2e-22 MLRHACGFALADNGVDTRLLQDYLGHRNIQHTVRYTASNAARFKGVWKKKPR >gi|299856443|gb|ADWV01000008.1| GENE 42 51153 - 51290 73 45 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C0337 NR:ns ## KEGG: UTI89_C0337 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 45 7 51 51 73 97.0 3e-12 MAWTSLNEEASGYYQCLSVHQAGTGVSHPSGQVYRAGVQQRHYRG >gi|299856443|gb|ADWV01000008.1| GENE 43 51256 - 51966 256 236 aa, chain + ## HITS:1 COG:Z0392 KEGG:ns NR:ns ## COG: Z0392 COG2771 # Protein_GI_number: 15800028 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 EDL933 # 79 236 1 158 158 294 93.0 1e-79 MRVYSNVTTEVEFVLKTSCGYLLADIPSLPSGELVLLACLVRLRSDAGQWQVCLTGDSDW FDNAPASSLYNGFPHIGTLLKASRYQNQIIRWLLRPLPGDMSDFWLLTARELSVLKILMQ GMSFSEIARYEQRSSKTLHAIATQALRKLGLGTLSDFRLLYTGCGDSRVKRNIRLHARYV GQHSAHRLTQYVQNMVSGILYPEKVIVGKSINSDAISGKVLSGQRKHMSKKRPGVL >gi|299856443|gb|ADWV01000008.1| GENE 44 51963 - 52103 58 46 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227884674|ref|ZP_04002479.1| ## NR: gi|227884674|ref|ZP_04002479.1| hypothetical protein HMPREF0358_1266 [Escherichia coli 83972] # 1 46 1 46 46 71 93.0 1e-11 MTQQRCYYHPLRRVRTRYSVGAKIFLLLWAAGVGGTLYSLYSVLAY >gi|299856443|gb|ADWV01000008.1| GENE 45 52558 - 52881 184 107 aa, chain + ## HITS:1 COG:no KEGG:ECSE_0328 NR:ns ## KEGG: ECSE_0328 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 107 147 253 253 216 100.0 2e-55 MSERFPEKQKKVLSLLLAGHSWEYSAQFLKTGIRQIWLAEQSLKKRWGIPDSMSLREALL LSSNKFHGDGNALEKTNAMTLRENGNTNRYSVVVNAGTQALSLHKYK >gi|299856443|gb|ADWV01000008.1| GENE 46 52923 - 55220 1608 765 aa, chain + ## HITS:1 COG:STM0373_2 KEGG:ns NR:ns ## COG: STM0373_2 COG3468 # Protein_GI_number: 16763753 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Salmonella typhimurium LT2 # 348 765 36 467 467 139 29.0 2e-32 MKNSKAFYRSALATAIVMALSAPAFAADNAVSTTPVTLDKDKTTLDQDVVISNTADQQIT AVTINAADKDLNVTFGGHDITAESTADKKFLEGVKVSGDKNIVINATGSTITAQGEGTYV RTAMVISSTGDVVVNGGNFVAKNEKSSATGISLEGATGNNVTLNGTTINAQGNKSSSNGS TAIFAQKGSVLNGFKGDATDNITLAGSNIINGRIETIVIAKENTGTHTVNLNIKDGSVIG AANNKQTIYASASAQGAGSATQNLNLSVADSTIYSDIHALSASENSAGTTTNVNMNVARS YWEGNAYTFNSGDKAGSNLDINLSDSSVWKGKVSGAGDASVSLQNGSVWNVTGSSTVDAL AVKDSTVNITKATVNTGTFASQNGTLIVDASSENTLDISGKASGDLRVYSAGSLDLINEQ TAFISTGKDSTLKATGTTEGGLYQYDLTQGADGNFYFVKNTHKASNASSLIQAMAAAPAN VANLQADTLSARQDAVRLSENDKGGVWIQYFGGKQKHTTAGNASYDLDVNGVMLGGDTRF MTEDGSWLAGVAMSSAKGDMTTMQSKGDTEGYSFHAYLSRQYNNGIFIDTAAQFGHYSNT ADVRLMNGGGTIKADFNTNGFGAMVKGGYTWKDGNGLFIQPYAKLSALTLEGVDYQLNGV DVHSDSYNSVLGEAGTRVGYDFAVGNSTVKPYLNLAALNEFSDGNKVRLGDESVNASIDG AAFRVGAGVQADITKNMGAYASLDYTKGDDIENPLQGVVGINVTW >gi|299856443|gb|ADWV01000008.1| GENE 47 55404 - 56069 152 221 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0312 NR:ns ## KEGG: EC55989_0312 # Name: ykgH # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.coli_55989 # Pathway: not_defined # 1 221 1 221 221 433 98.0 1e-120 MREQIKQDIDLIEILFYLKKKIRVILFIMAICMAMVLLFLYINKDNIKVIYSLKINQTTP GILVSCDSNNNFACQTTMTEDVIQRITTFFHTSPDVKNREIKLEWSGDKRDLPTAEAEIS RVQASIIKWYASEYHNGRQVLDEIQTPSAINSELYTKMIYLTRNWSLYPNGDGCVTISSP EIKNKYPAAICLALGFFLSIVISVMFCLVKKMVDEYQQNSG >gi|299856443|gb|ADWV01000008.1| GENE 48 56044 - 56241 62 65 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0311 NR:ns ## KEGG: EC55989_0311 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 65 1 65 65 124 100.0 7e-28 MNTNKTLGSNKQHSDRECLYKAEVTMTGKGTRFQEWMPVFFTVNILALLMPGYLQKSSIT MTERG >gi|299856443|gb|ADWV01000008.1| GENE 49 56315 - 57010 613 231 aa, chain - ## HITS:1 COG:ykgG KEGG:ns NR:ns ## COG: ykgG COG1556 # Protein_GI_number: 16128293 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 231 52 282 282 438 99.0 1e-123 MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQQRCDAFIQFASDVMLT RCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISERLQQECNAVVWDPAKGAEN ISQAEQAKVGVVYAEYGLTESGGVVLFSAAGRGRSLSLLPESSLFILRKSTILPRVAQLA EKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVHGPVKAVYLIIEDC >gi|299856443|gb|ADWV01000008.1| GENE 50 57003 - 58430 1105 475 aa, chain - ## HITS:1 COG:ykgF KEGG:ns NR:ns ## COG: ykgF COG1139 # Protein_GI_number: 16128292 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Escherichia coli K12 # 1 475 1 475 475 996 99.0 0 MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDELGHWEEWRDRAAQIRD HVLSNLDAYLYQLSEKVTQNGGHVWFAKTKEDATRYILQVAQRKNARKVVKSKSMVTEEI GVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHKDRHQIRRVLHERLGYEGPET PEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAVMG MERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGRSE VLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVISPLLGGYKDFKDLPY ACSLCTACDSVCPVRIPLSKLILSHRRVMAEKGITAKAEQRAIKMFAYANSHPGLWKVGM MAGAHAASWFINGGKTPLKFGAISDWMEARDLPEADGESFRSWFKKHQAQEKKNG >gi|299856443|gb|ADWV01000008.1| GENE 51 58441 - 59160 561 239 aa, chain - ## HITS:1 COG:ECs0344 KEGG:ns NR:ns ## COG: ECs0344 COG0247 # Protein_GI_number: 15829598 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 486 100.0 1e-137 MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQPAINSGYIKEAIPGMK NLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAEKVAARMQDLTSFIVNKLG VVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGLELLTFAEQDTCCGFGGTFSV KMAEISGEMVKEKVAHLMEVRPEYLIGADVSCLLNISGRLQREGQKVKVMHIAEVLMSR >gi|299856443|gb|ADWV01000008.1| GENE 52 59690 - 60544 311 284 aa, chain - ## HITS:1 COG:ykgD KEGG:ns NR:ns ## COG: ykgD COG2207 # Protein_GI_number: 16128290 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 284 1 284 284 560 99.0 1e-160 MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFT LRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFLTSLPETLFLAPVNHSVEY NWLREAIPFLQQESRLAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLG AVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFFR ETLPVVVIAESVGYASESSFHKAFVREFGCTPGEYRERVRQLAP >gi|299856443|gb|ADWV01000008.1| GENE 53 60701 - 60937 68 78 aa, chain + ## HITS:1 COG:no KEGG:SSON_0321 NR:ns ## KEGG: SSON_0321 # Name: ykgI # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 78 6 83 83 112 97.0 3e-24 MFKKSVLFATLLSGVMAFSANADDKIILKHISVSSVSASPTVLEDTIADIARKYNASSWK VTSMRIDNNSTATAVLYK >gi|299856443|gb|ADWV01000008.1| GENE 54 60949 - 61542 612 197 aa, chain + ## HITS:1 COG:ykgB KEGG:ns NR:ns ## COG: ykgB COG3059 # Protein_GI_number: 16128286 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 197 4 200 200 387 100.0 1e-108 MEKYLHLLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSITPFVANSPLMSFFYEHP EDYKQYLTHEGEYKPEARAWQTANNTYGFSNGLGVVEVIIALLVLANPVNRWLGLLGGLM AFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAGRLVLKDTLMLAGAVMIMADSARE ILKQRSNESSSTLKTEY >gi|299856443|gb|ADWV01000008.1| GENE 55 61702 - 62571 725 289 aa, chain - ## HITS:1 COG:ECs0338 KEGG:ns NR:ns ## COG: ECs0338 COG0656 # Protein_GI_number: 15829592 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 600 99.0 1e-171 MEFSVLSNNLKMPMMGFGVFQVTDKNVCKQSVLNAIRTGYRLIDTAAVYGNEDAVGEAVR EAIFEGLCTRDELFITSKLWVQDMLNQDTAAAGIEASLKKSGLEYFDLYLLHQAMRDYFS AWRALEDAYEEGKLKAIGVSNFYPHVLANFCETVRVKPMVNQVELHPYFAQPEALATMKY YNVQPEAWAPLGGGRHKPFENNLLQSIADAHQKSISQVILRWNIQRGVVVIPKSTHQQRI EENFAIWDFSLTEKEMAQISSLDLGYVGESVKHFNPEFVRGCLAVKIHD >gi|299856443|gb|ADWV01000008.1| GENE 56 62820 - 63128 150 102 aa, chain + ## HITS:1 COG:ykgA KEGG:ns NR:ns ## COG: ykgA COG2207 # Protein_GI_number: 16128285 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 102 12 113 239 204 100.0 4e-53 MIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLC RAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPRE >gi|299856443|gb|ADWV01000008.1| GENE 57 63324 - 63677 208 117 aa, chain + ## HITS:1 COG:ECs0337 KEGG:ns NR:ns ## COG: ECs0337 COG2207 # Protein_GI_number: 15829591 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 117 180 296 296 242 98.0 1e-64 MKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCKPTDSEMPKEWTINRGLYASFRYEGE WEHYPEWARNLYLMELPARGLARVNGSDIERFYYNEDFVEKDSNDVVCEIFIPVRPV >gi|299856443|gb|ADWV01000008.1| GENE 58 63798 - 68051 2996 1417 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0302 NR:ns ## KEGG: EC55989_0302 # Name: not_defined # Def: putative adhesin # Organism: E.coli_55989 # Pathway: not_defined # 1 1417 1 1417 1417 2491 99.0 0 MSRYKTGHKQPRFRYSVLARCVAWANISVQVLFPLAVTFTPVMAARAQHAVQPRLSMGNT TVTADNNVEKNVASFAANAGTFLSSQPDSDATRNFITGMATAKANQEIQEWLGKYGTARV KLNVDKDFSLKDSSLEMLYPIYDTPTNMLFTQGAIHRTDDRTQSNIGFGWRHFSGNDWMA GVNTFIDHDLSRSHTRIGVGAEYWRDYLKLSANGYIRASGWKKSPDIEDYQERPANGWDI RAEGYLPAWPQLGASLMYEQYYGDEVGLFGKDKRQKDPHAISAEVTYTPVPLLTLSAGHK QGKSGENDTRFGLEVNYRIGEPLEKQLDTDSIRERRVLAGSRYDLVERNNNIVLEYRKSE VIRIALPERIEGKGGQTLSLGLVVSKATHGLKNVQWEAPSLLAEGGKITGQGSQWQVTLP AYRPGKDNYYAISAVAYDNKGNTSKRVQTEVVITGAGMSADRTALTLDGQSRIQMLANGN EQRPLVLSLRDAEGQPVTGMKDQIKTELTFKPAGNIVTRTLKATKSQAKPTLGEFTETEA GVYQSVFTTGTQSGEATITVSVDGMSKTVTAELRATMMDVANSTLSANEPSGDVVADGQQ AYTLTLTAVDSEGNPVTGEASRLRFVPQDTNGVTVGAISEIKPGVYSATVSSTRAGNVVV RAFSEQYQLGTLQQTLKFVAGPLDAAHSSITLNPDKPVVGGTVTAIWTAKDANDNPVTGL NPDAPSLSGAAAVGSTASGWTDNGDGTWTAQISLGTTAGELEVMPKLNGQDAAANAAKVT VVADALSSNQSKVSVAEDHVKAGESTTVTLVAKDAHGNAISGLSLSASLTGTASEGATVS SWTEKGDGSYVATLTTGGKTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADNK APTVKTTTELTFTVKDAYGNPVTGMKPDAPVFSGAANTGSERPSAGNWTEKGNGVYVSTL TLGSAAGQLSVMPRVNGQNAVAQPLVLNVAGDASKAEIGDMTVKVNNQLANGQSANQITL TVVDSYGNPLQGQEVTLNLPQGVTSKTGNTVTTNAAGKADIELISTVAGELEIAAAVKNS QKTVTVKFNADASTGQANLQVDTAVQKVANGKDAFTLTATVEDKNGNPVPGSLVTFNLPR GVKPLTGDNVWVKANDEGKAELQVVSVTAGTYEITASAGNSQPSNTQTITFVADKATATV SGIEVMGNYALADGKAKQTYKVTVTDANNNLVKDSEVTLTASPASLNLEPNGTATTNEQG QAIFTATTTVAAIYTLKAQVSQTNGQVSTKTAESKFVADDKNAVLTASSDMQSLVADGKS TAKLEVTLMSANNPVGGNMWVDIQTPEGVTEKDYQFLPSKNDHFVSGKITRKFSTSKPGV YTFTFNALTYGGYEMKPVTVTITAVDADTAKDEEAMK >gi|299856443|gb|ADWV01000008.1| GENE 59 69146 - 69247 92 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKENKVQQISHKLINIVVFVAIVEYAYLFLHFY >gi|299856443|gb|ADWV01000008.1| GENE 60 69607 - 69873 457 88 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|191165768|ref|ZP_03027607.1| 50S ribosomal protein L31 type B [Escherichia coli B7A] # 1 88 1 88 88 180 98 3e-44 MMKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTG KLRTVASEGNVARFTQRFGRFVSTKKGS >gi|299856443|gb|ADWV01000008.1| GENE 61 69870 - 70013 241 47 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|26246304|ref|NP_752343.1| 50S ribosomal protein L36 [Escherichia coli CFT073] # 1 47 1 47 47 97 97 4e-19 MMKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKKKR >gi|299856443|gb|ADWV01000008.1| GENE 62 71098 - 71640 199 180 aa, chain + ## HITS:1 COG:ECs0324 KEGG:ns NR:ns ## COG: ECs0324 COG2771 # Protein_GI_number: 15829578 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 180 17 196 196 331 98.0 6e-91 MECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLNTDSLSEFIN RDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLSRDIRKELAYVINGRFL RKDIKKDKITDREMEIIRMTAQGMQPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ >gi|299856443|gb|ADWV01000008.1| GENE 63 71715 - 72302 670 195 aa, chain + ## HITS:1 COG:no KEGG:JW0287 NR:ns ## KEGG: JW0287 # Name: yagZ # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 195 1 195 195 290 100.0 2e-77 MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEG IKGFNSQKGLFDVAIEGDSTATAFKLTSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTG DTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSIISGTTNGTTAVTDYSTLPEGI WSGDVSVQFDATWTS >gi|299856443|gb|ADWV01000008.1| GENE 64 72360 - 73028 534 222 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1705 NR:ns ## KEGG: APECO1_1705 # Name: yagY # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 222 17 238 238 418 99.0 1e-116 MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNSTDSGRLINIRLERLSS PLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDA QRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLTNTGNATLRILAYGPCLKAAN GKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKFIPVK >gi|299856443|gb|ADWV01000008.1| GENE 65 73054 - 75579 1817 841 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0268 NR:ns ## KEGG: ECO103_0268 # Name: ecpC # Def: putative outer membrane usher protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 841 1 841 841 1548 99.0 0 MPLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQAFSQALQDGMSVPLYI HLAGSQGRQDDQRIGSAFIWLDDGQLRIRKIQLEESEDNASVSEQTRQQLMALANAPFNE ALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSEDIGQSSVNTLSSNLSYNLGVY NNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRF AGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASSTIFDSSQSATPVIAFLPAAGEVHLT RDGRLLSVQNFTMGNHEVDTRGLPYGIYDVEVEVIVNGRVISKRPQRVNKLFSRGRGVGA PLAWQVWGGSFHMDRWSENGKKTRPAKESWLAGASTSGSLSTLSWAATGYGYDNQAVGET RLTLPLGGAINVNLQNMLASDSSWSSIGSISATLPGGFSSLWVNQEKTRIGNQLRRSDAD NRAIGGTLNLNSLWSKLGTFSISYNDDRRYNSHYYTADYYQNVYSGTFGSLGLRAGIQRY NNGDSNANTGKYIALDLSLPLGNWFSAGMTHQNGYTMANLSARKQFDEGTIRTVGANLSR AISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYINTNLTANGSVGWQGKNIAASG RTDGNAGVIFNTGLEDDGQISAKINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSY DIVSGRKSHLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENG EFVMDVDKKYPTIDFRYSGNKTCEVALELNQARGAVWVGDVVCSGLSSWAAVTQTGEENE S >gi|299856443|gb|ADWV01000008.1| GENE 66 75593 - 77212 940 539 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_0291 NR:ns ## KEGG: ECIAI1_0291 # Name: yagW # Def: putative surface or exported protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 539 9 547 547 1042 100.0 0 MIIFALIWPVTELRAAVSKTTWADAPAREFVFVENNSDDNFFVTPGGALDPRLTGANRWT GLKYTGSGTIYQQSLGYIDNGYNTGLYTNWKFDMWLENSPVSSPLTGLRCINWYAGCNMT TSLILPQTTDASGFYGATVTSGGAKWMHGMLSDAFYQYLQQMPVGSSFTMTINACQTSVN YDASSGARCKDQATGNWYVRNVTHTKAANLRLINTHSLAEVFINSDGVPTLGEGNADCRT QTIGSLSGLSCKMVNYTLQTNGLSNTSIHIFPAIANSSLASAVGAYDMQFSLNGSSWKPV SNTAYYYTFNEMKSADSIYVFFSSNFFKQMVNLGISDINTKDLFNFRFQNTTSPESGWYE FSTSNTLIIKPRDFSISIISDEYTQTPSREGYVGSGESALDFGYIVTTSGKTAADEVLIK VTGPAQVIGGRSYCVFSSDDGKAKVPFPATLSFITRNGATKTYDAGCDDSWRDMTDALWL TTPWTDISGEVGQMDKTTVKFSIPMDNAISLRTVDDNGWFGEVSASGEIHVQATWRNIN >gi|299856443|gb|ADWV01000008.1| GENE 67 77181 - 77891 428 236 aa, chain + ## HITS:1 COG:no KEGG:ECSE_0307 NR:ns ## KEGG: ECSE_0307 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 236 16 251 251 476 100.0 1e-133 MFRRRGVTLTKALLTAVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRI AISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYRVSFRE VPTRNQTRRSPTGGEVSTEPVVVMDTILVVRPRQVQFKWSFDKVTGTVSNTGNTWFKLLI KPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD >gi|299856443|gb|ADWV01000008.1| GENE 68 78781 - 79395 316 204 aa, chain - ## HITS:1 COG:ECs0317 KEGG:ns NR:ns ## COG: ECs0317 COG3477 # Protein_GI_number: 15829571 # Func_class: S Function unknown # Function: Predicted periplasmic/secreted protein # Organism: Escherichia coli O157:H7 # 1 204 1 204 204 408 100.0 1e-114 MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRA AGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVV AEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIE IIRRDLRNRITHEPDPEIPLGSNR >gi|299856443|gb|ADWV01000008.1| GENE 69 79813 - 80502 470 229 aa, chain + ## HITS:1 COG:ECs0316 KEGG:ns NR:ns ## COG: ECs0316 COG2080 # Protein_GI_number: 15829570 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 432 98.0 1e-121 MSNQGEYPEDNRVGKHEPHDLSLTRRDLIKVSAATAATAVVYPHSTLAASVPAATPAPEI MPLTLKVNGKTEQLEVDTRTTLLDALRENLHLIGTKKGCDHGQCGACTVLVNGRRLNACL TLAVMHQGAEITTIEGLGSPDNLHPMQAAFIKHDGFQCGYCTSGQICSSVAVLKEIQDGI PSHVTVDLVSAPETTADEIRERMSGNICRCGAYANILAAIEDAAGEIKS >gi|299856443|gb|ADWV01000008.1| GENE 70 80499 - 81314 453 271 aa, chain + ## HITS:1 COG:yagS KEGG:ns NR:ns ## COG: yagS COG1319 # Protein_GI_number: 16128270 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs # Organism: Escherichia coli K12 # 1 245 1 245 318 473 99.0 1e-133 MKAFTYERVNTPAEAALSAQRVPGAKFIAGGTNLLDLMKLEIETPTHLIDVNGLGLDKIE VTDAGGLRIGALVRNTDLAAHERVRRDYAVLSRALLAGASGQLRNQATTAGNLLQRTRCP YFYDTNQPCNKRLPGSGCAALEGFSRQHAVVGVSEACIATHPSDMAVAMRLLDAVVETIT PEGKTRSITLADFYHPPGKTPHIETALLPGELIVAVTLPPPLGGKHIYRKVRDRASYAFA LVSIAPPTPLPWYRSRLLRLCPGIGRGDYSA >gi|299856443|gb|ADWV01000008.1| GENE 71 81516 - 83714 1770 732 aa, chain + ## HITS:1 COG:yagR KEGG:ns NR:ns ## COG: yagR COG1529 # Protein_GI_number: 16128269 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli K12 # 1 732 1 732 732 1404 100.0 0 MKFDKPAGENPIDQLKVVGRPHDRIDGPLKTTGTARYAYEWHEEAPNAAYGYIVGSAIAK GRLTALDTDAAQKAPGVLAVITASNAGALGKGDKNTARLLGGPTIEHYHQAIALVVAETF EQARAAASLVQAHYRRNKGAYSLADEKQAVNQPPEDTPDKNVGDFDGAFTSAAVKIDATY TTPDQSHMAMEPHASMAVWDGNKLTLWTSNQMIDWCRTDLAKTLKVPVENVRIISPYIGG GFGGKLFLRSDALLAALAARAVKRPVKVMLPRPSIPNNTTHRPATLQHLRIGADQSGKIT AISHESWSGNLPGGTPETAVQQSELLYAGANRHTGLRLATLDLPEGNAMRAPGEAPGLMA LEIAIDELAEKAGIDPVEFRILNDTQVDPADPTRCFSRRQLIECLRTGADKFGWKQRNAT PGQVRDGEWLVGHGVAAGFRNNLLEKSGARVHLEQNGTVTVETDMTDIGTGSYTILAQTA AEMLGVPLEQVAVHLGDSSFPVSAGSGGQWGANTSTSGVYAACMKLREMIASAVGFDPEQ SQFADGKITNGTRSATLHEATAGGRLTAEESIEFGTLSKEYQQSTFAGHFVEVGVHSATG EVRVRRMLAVCAAGRILNPKTARSQVIGAMTMGMGAALMEELAVDDRLGYFVNHDMAGYE VPVHADIPKQEVIFLDDTDPISSPMKAKGVGELGLCGVSAAIANAVYNATGIRVRDYPIT LDKLLDKLPDVV >gi|299856443|gb|ADWV01000008.1| GENE 72 83724 - 84680 502 318 aa, chain + ## HITS:1 COG:yagQ KEGG:ns NR:ns ## COG: yagQ COG1975 # Protein_GI_number: 16128268 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Escherichia coli K12 # 1 318 1 318 318 598 97.0 1e-171 MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIHGGAARPLGAQ MVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGRDREIRYGEGSPWFDIVLPCGGGITLM LHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQTRTGWNLNGFEVGFRPCVRL MIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPALQAA REAKPFYLGALGSHRTHTLRLQKLHELGWSREETAQIRAPVGIFPKARDAHTLALSVLAE IASVRLHHEEDSCLPPSS >gi|299856443|gb|ADWV01000008.1| GENE 73 84659 - 85069 298 136 aa, chain + ## HITS:1 COG:yagP KEGG:ns NR:ns ## COG: yagP COG0583 # Protein_GI_number: 16128267 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 135 1 135 136 250 99.0 5e-67 MPAPVVLILAAGRGERFLASGGNTHKCIGWRQSPEVAPYRWPFEENGRTFDLAIEPQITT NDLRLMLRLALAGGGITIATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPK LRALIDYVKEWRQQLV >gi|299856443|gb|ADWV01000008.1| GENE 74 85884 - 86276 220 130 aa, chain + ## HITS:1 COG:Z4315_2 KEGG:ns NR:ns ## COG: Z4315_2 COG2963 # Protein_GI_number: 15803508 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 4 129 2 133 134 93 43.0 1e-19 MVKKRPRRPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQYRKGGLLPSG KNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRLKGKLTPALLQT LIREIKGSSH >gi|299856443|gb|ADWV01000008.1| GENE 75 86273 - 86623 173 116 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984516|ref|ZP_01817804.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP3-BS71] # 1 102 1 102 107 71 38 3e-11 LMISLPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLFIFRGRRGDQIKVLWA DSDGLCLFTKRLERGRFVWPVTRDGKVHLTPAQLSMLLEGINWKHPKRTERAGIRI >gi|299856443|gb|ADWV01000008.1| GENE 76 86643 - 88214 846 523 aa, chain + ## HITS:1 COG:ECs0330 KEGG:ns NR:ns ## COG: ECs0330 COG3436 # Protein_GI_number: 15829584 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 33 523 26 512 512 588 59.0 1e-167 MDTSLAHENARLRALLQTQQDTIRQMAEYNRLLSQRVAAYASEINRLKALVAKLQRMQFG KSSEKLRAKTERQIQEAQERISALQEEMAETLGEQYDPVLPSALRQSSARKPLPASLPRE TRVIRPEEECCPACGGELSSLGCDVSEQLELISSAFKVIETQRPKQACCRCDHIVQAPVP SKPIARSYAGAGLLAHVVTGKYADHLPLYRQSEIYRRQGVELSRATLGRWTGAVAELLEP LYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAYS PDRKGIHPQNHLAGYSGVLQADAYGGYRALYESGRITEAACMAHARRKIHDVHARAPTYI TTEALQRIGELYAIEAEVRGCSAEQRLAARKARAAPLMQSLYDWIQQQMKTLSRHSDTAK AFAYLLKQWDALNVYCSNGWVEIDNNIAENALRGVAVGRKNWMFAGSDSGGEHAAVLYSL IGTCRLNNVEPEKWLRYVIEHIQDWPANRVRDLLPWKVDLSSQ >gi|299856443|gb|ADWV01000008.1| GENE 77 88454 - 88786 395 110 aa, chain - ## HITS:1 COG:no KEGG:JW1558 NR:ns ## KEGG: JW1558 # Name: flxA # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 110 1 110 110 128 99.0 5e-29 MSVTIQGNTSTVISNNSAPEGTSEIAKITRQIQVLTEKLGKISSEEGMTTQQKKEMAALV QKQIESLRAQLEQLLRQQAEKKNEDATVQPDKKEEKKDDTNTAGTIDIYV >gi|299856443|gb|ADWV01000008.1| GENE 78 89566 - 90339 350 257 aa, chain + ## HITS:1 COG:ECs0285 KEGG:ns NR:ns ## COG: ECs0285 COG3680 # Protein_GI_number: 15829539 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 257 1 257 257 520 98.0 1e-147 MDITEFPSGVIEHLGWYVYRLIDPRDGSTFYVGKGKGNRVFAHMRGEVAAADDDELLSNK LKQIREIRLAGLEVIHVIHRHGMTDEKTAYEVEAALIDAYPGLTNIMNGAGSNEFGAAHV KELIATYQPETITFHHKALMISVNRSAKDSELYDAVRFSWRINVSRASQAEVILATVRGI VRGVFIADKWLKSTRENFPTMKYWDEDPDFEATQSSRYGFEGREAPPEIANLYLGKKIPD ELRKKGAMSPVRYSPNF >gi|299856443|gb|ADWV01000008.1| GENE 79 90397 - 90951 365 184 aa, chain - ## HITS:1 COG:ECs0284 KEGG:ns NR:ns ## COG: ECs0284 COG1961 # Protein_GI_number: 15829538 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Escherichia coli O157:H7 # 1 184 1 184 184 356 97.0 2e-98 MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVV WKLDRLGRSMRHLVILVEELRERGVNFRSLTDAIDTSTPMGRFFFHVMGALAEMERELIV ERTKAGLEAARAQGRIGGRRPKLTPEQWAQAGRLIASGVPRQKVAIIYDVGISTLYKKFP VGDK >gi|299856443|gb|ADWV01000008.1| GENE 80 91161 - 91490 122 109 aa, chain + ## HITS:1 COG:no KEGG:Dd1591_4025 NR:ns ## KEGG: Dd1591_4025 # Name: not_defined # Def: tail collar domain protein # Organism: D.zeae # Pathway: not_defined # 3 109 270 371 371 82 49.0 7e-15 MKLPDLRGEFIRGWDDGRGVDTGRSLLSAQGGTYIGVDWKNDTQATVVLATATAYDLSPF QGDKSPSTTALQSQTITGSTAMNKLNVDSGNSIVSRPRNIAFNYIVRAA >gi|299856443|gb|ADWV01000008.1| GENE 81 91751 - 92095 99 114 aa, chain + ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 6 112 140 244 247 59 34.0 2e-09 MQQVQVTTLGDYPTHTTPIAPTSLYDKWNGEQWVTDVEAQHAANVATAEGEKLSRTDQAN DYMNKKQWPGKAALGRLTETEKEQYNLWLDYLDALESVDISSAPDINWPESPEE >gi|299856443|gb|ADWV01000008.1| GENE 82 92067 - 92486 275 139 aa, chain - ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 44 137 154 247 247 58 43.0 4e-09 MFYSAKENAFYADELKSIYENAGSWPDDAVEVDYSVFVEFAGETPNGKLRAPNSDGLPEW IDIPEPTEEEIIALAEAEKSRLRASADSEIEWRQDAVDAGIATEEETVSLAEWKKYRVLL MRVDTADPDWPTPPATQAS >gi|299856443|gb|ADWV01000008.1| GENE 83 92492 - 93130 341 212 aa, chain - ## HITS:1 COG:no KEGG:JW1140 NR:ns ## KEGG: JW1140 # Name: ycfK # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 181 1 185 209 220 69.0 3e-56 MHRIDTKTAQKDKFGAGKNGFTRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEK GRHDQLLTALRALLLSRKNPFGDIKSDGTVKTALENLGLGEGAKLGAAVCVTGSTGYMTI PAMVAGKERVIILQWFGAATTDYVTPVTANFPIAFPNECMIPLFSDVSTGAVDLSSTAAY SLAVGRSYYTTVTRTQITCAGYGGFRVFAIGW >gi|299856443|gb|ADWV01000008.1| GENE 84 93134 - 93718 352 194 aa, chain - ## HITS:1 COG:ymfQ KEGG:ns NR:ns ## COG: ymfQ COG3778 # Protein_GI_number: 16129116 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 194 1 194 194 379 97.0 1e-105 MDVTNDDYIRLLSALLPPGPAWSASDPAIAGAAQSLTRVHQRADALMRELDPRTTTELIN RWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFYLAQLAALGRPDATITRYD KSTFTCSSACTDAVNAPEWRYYWQVNMPADTNTTWMTCGDPCDSALRIWGDTVVECVLNK LCPSHTYVIFKYPE >gi|299856443|gb|ADWV01000008.1| GENE 85 93709 - 94767 774 352 aa, chain - ## HITS:1 COG:ymfP KEGG:ns NR:ns ## COG: ymfP COG3299 # Protein_GI_number: 16129115 # Func_class: S Function unknown # Function: Uncharacterized homolog of phage Mu protein gp47 # Organism: Escherichia coli K12 # 92 352 3 263 263 495 97.0 1e-140 MADSEFQRPTLAENISMLRNDLFARLDVSDTLRRMDEDVRAKVYAAALHTVYGYIDYLAM NMLPDLCDESWLARHAAMKRCPRKGATSASGYMRWEGVSDGLKVTAGSVIQRDDLVQYTA TSDATSSGGVLRVPIACSTAGAVGNADDGTALILVTPVNGLPSSGVADTLTGGFDTEDLE TWRARVIERYYWTPQGGADGDYVVWAKEVPGITRAWTYRHWMGTGTVGVMIASSDLINPI PEESTETAARQHIEPLAPVAGSDLYVFRPVAHTVDFHIRVTPDTPEIRAAITAELRSFLL RDGYPQGELKVSRISEAISGANGEYSHQLLAPADNISIAKNELAVLGTISWT >gi|299856443|gb|ADWV01000008.1| GENE 86 94754 - 95179 366 141 aa, chain - ## HITS:1 COG:YPO1249 KEGG:ns NR:ns ## COG: YPO1249 COG4381 # Protein_GI_number: 16121535 # Func_class: S Function unknown # Function: Mu-like prophage protein gp46 # Organism: Yersinia pestis # 19 102 29 111 151 63 46.0 8e-11 MELWLTVNGKRTCASAPLDPLTRAVVISLFTWRRAEPDDNADVPMGWWGDTWPAVQNDRY GSRLWLLQRSKLTNQLVQTVRGYIRECLQWMIDDGVVSRIDLDIRRTGINELGNSITLWR RDGPVMISFDDLWSAITHGGQ >gi|299856443|gb|ADWV01000008.1| GENE 87 95179 - 95727 612 182 aa, chain - ## HITS:1 COG:YPO1248 KEGG:ns NR:ns ## COG: YPO1248 COG4384 # Protein_GI_number: 16121534 # Func_class: S Function unknown # Function: Mu-like prophage protein gp45 # Organism: Yersinia pestis # 4 173 8 186 198 79 30.0 3e-15 MRTIEAMQRQLLGLIGRAVVKSISAATKCQTVDVSLIAGEPKAGVEHLEPYGFTARANSG AEAVVLFPDGDRSHAVVVTVSDRRYRLKGLHTGEVAVYDDQGQSVTLTREGIVVDGAGKT ITFRNAPKARFEMDLEVTGQVKDLCDSTGTTMSAMRLAYNGHRHRENGQGSNTDKPDKAM EA >gi|299856443|gb|ADWV01000008.1| GENE 88 95727 - 96806 852 359 aa, chain - ## HITS:1 COG:ECs4984 KEGG:ns NR:ns ## COG: ECs4984 COG4379 # Protein_GI_number: 15834238 # Func_class: R General function prediction only # Function: Mu-like prophage tail protein gpP # Organism: Escherichia coli O157:H7 # 1 345 1 346 374 136 31.0 7e-32 MNDNVTLRVNGREWNGWTSVRIGAGIERLARDFSVEITRQWPGDEGITTLQPRIKNGSKV EVLIGDELVITGWVEATPVRYDARSVSTGIAGRSLTADLIDCAAEPTQFNGRSLVQIAQA LAAPFGIEVVNSGAPSGVIPDVQPDHGETVIEVINKILGQQQALAYDDPHGRLVIGGIGS TRAHTALVLGENILSCDTEKSIRERFSVYQVAGQRAGNDDDFGEATTTALRARTEDAFIA RYRPMYIRQTGQATGAGCIARADFEARQRAARTDETTYVVQGWRQGNGTLWQPNQRVIVF DPVCGFDNTELLVSEVTFTQDQNGTLTEIRVGPPDAYLPEPEDPGARKKKKARVQEDPF >gi|299856443|gb|ADWV01000008.1| GENE 89 96803 - 97423 427 206 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C2969 NR:ns ## KEGG: UTI89_C2969 # Name: not_defined # Def: bacteriophage V tail/DNA circulation protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 206 246 451 451 363 96.0 2e-99 MIKTLSGVSLGSDLQPRGVWKTDSKTTATATQQRNVVASTLRTTAISEAAYAVTRLPAPT TSAVMQNAAVGQATTAAQSTGWPSVTHPALNNAPAMKNMVDLPTWEELTDIRDTLNTAID KELSRTTSDALFLALRRVKADLNADINTRLEQSARIIQRTPDEVLPALVLAATWFDNATR DADIIRRNAITHPGFVPVIPLKVPVQ >gi|299856443|gb|ADWV01000008.1| GENE 90 97443 - 97739 394 98 aa, chain - ## HITS:1 COG:YPO1242 KEGG:ns NR:ns ## COG: YPO1242 COG4386 # Protein_GI_number: 16121528 # Func_class: R General function prediction only # Function: Mu-like prophage tail sheath protein gpL # Organism: Yersinia pestis # 1 94 1 94 502 68 40.0 2e-12 MTISFNTIPSNTLVPLFYAEMDNQAANTAQDSGASLLIGHANNGAEIVANSLVLMPSADY ARQICGAGSQLARMVEAYRQTDPFGELYVIAVPETPLW >gi|299856443|gb|ADWV01000008.1| GENE 91 97723 - 97893 64 56 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0899 NR:ns ## KEGG: ECUMN_0899 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 56 1 56 56 93 100.0 2e-18 MFVKPVKGRSVPDPARGDLLPAEGRNVDENNYWLRREAAGDIRRVNKKVNTDDDKL >gi|299856443|gb|ADWV01000008.1| GENE 92 97902 - 98189 183 95 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0898 NR:ns ## KEGG: ECUMN_0898 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 13 95 104 186 186 164 97.0 1e-39 MSSYVVCRNQRRHPEACGNPITYDGGTLLDLNRHELIYQFDFSVISELTEDDTRQQDDLN SLDELRTLAIDVDYLDPGNGPDGDIEHHTEIPLPS >gi|299856443|gb|ADWV01000008.1| GENE 93 98319 - 98645 259 108 aa, chain - ## HITS:1 COG:HI0749 KEGG:ns NR:ns ## COG: HI0749 COG1974 # Protein_GI_number: 16272690 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Haemophilus influenzae # 1 90 3 92 209 70 41.0 7e-13 MTTLTQCQQQVLDMLISYQKERGFPPTNQEVATMLGYRSVNAAVEHLRALEKKGVITIKR GMARGITLHTAVKDDDSEAVGIIRALLAGEENARLRATHWLHERDLKV >gi|299856443|gb|ADWV01000008.1| GENE 94 98642 - 99295 559 217 aa, chain - ## HITS:1 COG:no KEGG:ECS88_0548 NR:ns ## KEGG: ECS88_0548 # Name: not_defined # Def: putative phage AdoMet-dependent methyltransferase # Organism: E.coli_S88 # Pathway: not_defined # 1 217 12 228 228 446 99.0 1e-124 MSNKYCQTLVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAY YTAEDNALAHDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKHASAMRDKGGRY VFLIKAATSEVWWPEDADHIAFIRGRIGFELPVWFIPKDEKQVPTGAFFAGAIAVFDKTW KGPAISYIGRDELEACGEAFLAQVRQQAEKLVREMAA >gi|299856443|gb|ADWV01000008.1| GENE 95 99295 - 99783 186 162 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2902 NR:ns ## KEGG: ECS88_2902 # Name: yfdN # Def: conserved hypothetical protein; CPS-53 (KpLE1) prophage # Organism: E.coli_S88 # Pathway: not_defined # 1 162 3 164 164 294 100.0 8e-79 MSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTRRHFP RLTERAQEPEPQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLYRRAATVWMAAF RESHSQPERNNFLARRERCLRKSSKRAASGEEWYLSGNYVGA >gi|299856443|gb|ADWV01000008.1| GENE 96 99786 - 100727 450 313 aa, chain - ## HITS:1 COG:no KEGG:SeSA_A4446 NR:ns ## KEGG: SeSA_A4446 # Name: not_defined # Def: phage O protein family # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 313 1 313 313 588 99.0 1e-166 MSTKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIETIARQIGAGMSTVRTA IARLEAEGWLTRKARRQGNRNASNVYQLNVAKLQAAAFSQLSDSDPSKSDASKSDPSKFD ASKSGKKAVFHPSESGGDPSVKSKHDPSDKKTSRPDASQPDTQTAEQEFLTRHPDAVVFS PKKRQWGTQDDLTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGR THKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKASYD NVDYSQIPAGFRG >gi|299856443|gb|ADWV01000008.1| GENE 97 100717 - 100896 127 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|193066827|ref|ZP_03047826.1| ## NR: gi|193066827|ref|ZP_03047826.1| conserved hypothetical protein [Escherichia coli E22] # 1 59 1 59 59 97 100.0 2e-19 MRQVNRWFKDHYGVPVRVIRWEPETQRVIYLREGYEHECFSPLEQFRRKFREIEVGHEH >gi|299856443|gb|ADWV01000008.1| GENE 98 101072 - 101623 352 183 aa, chain - ## HITS:1 COG:no KEGG:EFER_0584 NR:ns ## KEGG: EFER_0584 # Name: ymfL # Def: putative nucleic acid-binding protein; E14 prophage # Organism: E.fergusonii # Pathway: not_defined # 1 183 36 218 218 369 98.0 1e-101 MGKHHWKVEKQPEWYVKAVRKTIAALPGGYAEAADWLDVTENALFNRLRADGDQIFPLGW AMILQRAGGTHFIADAVAQSANGVFVSLPDVEDVDNADINQRLLEVIEQIGSYSKQIRSA IEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISESNDARECAAPGAVACRDCGE TNA >gi|299856443|gb|ADWV01000008.1| GENE 99 101616 - 101876 126 86 aa, chain - ## HITS:1 COG:STM0898A KEGG:ns NR:ns ## COG: STM0898A COG1396 # Protein_GI_number: 16764260 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 3 74 6 77 84 61 48.0 3e-10 MQSPLRNVRKAHGFTLQHVAAGVQVNPATLSRIERLEQIPSIELAERLANFFKGEVSEMQ ILYPARFQSSQNQNGFKPQEQEVNRG >gi|299856443|gb|ADWV01000008.1| GENE 100 101974 - 102666 454 230 aa, chain + ## HITS:1 COG:STM0898 KEGG:ns NR:ns ## COG: STM0898 COG2932 # Protein_GI_number: 16764259 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 229 3 230 231 218 51.0 9e-57 MNIGNRVRQLRQAKNMKIADLAEAIGVDAANISRLETGKQKQFTEQTLSNIAKSLGVDIA DLFTSAHKSNTVYKNSNNEDVAQVKDVFRIEMLDISASAGNGLIQGGDVIDVIHAIEYRT DNAVSMFGGRPANHIKVINVRGDSMCPTIEPGDLIFVDVSINQFDGDGIYVFGFDDKIYV KRLQMIPDKLLVISDNQIYREWGITSENEHRFMVFGKVLISQSQTLKRHN >gi|299856443|gb|ADWV01000008.1| GENE 101 103006 - 103212 216 68 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0866 NR:ns ## KEGG: ECUMN_0866 # Name: not_defined # Def: conserved hypothetical protein from phage origin # Organism: E.coli_UMN026 # Pathway: not_defined # 1 68 6 73 73 112 100.0 3e-24 MHKTEPKIVAPGYTDEEIYEWMTKKLAAINQLREVLSYRQETIDSLKKLDQEITVLSQDV TLDIVQTN >gi|299856443|gb|ADWV01000008.1| GENE 102 103184 - 103618 159 144 aa, chain - ## HITS:1 COG:no KEGG:EFER_0579 NR:ns ## KEGG: EFER_0579 # Name: not_defined # Def: hypothetical protein from phage origin # Organism: E.fergusonii # Pathway: not_defined # 1 144 1 144 144 260 100.0 1e-68 MSGNIYTLYKSHCENVGKYRGIEISGVVSSVEISKVESRATLLTLLDLVLHEHRKKFGTP YNQLNGKKALVHLILMKHHWMPKQINEMKFDELLLSIQDELTLDKISVTAQKFLDYRDWR SQIHHFDDFDENEWDPNLSAQYLK >gi|299856443|gb|ADWV01000008.1| GENE 103 104087 - 104449 516 120 aa, chain + ## HITS:1 COG:no KEGG:EFER_0577 NR:ns ## KEGG: EFER_0577 # Name: not_defined # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 1 120 107 226 226 236 100.0 2e-61 MASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRVK IKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGR >gi|299856443|gb|ADWV01000008.1| GENE 104 104515 - 105339 836 274 aa, chain + ## HITS:1 COG:yfdQ KEGG:ns NR:ns ## COG: yfdQ COG5532 # Protein_GI_number: 16130292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 274 1 274 274 500 98.0 1e-141 MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALS TASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFS ALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKTAAAVRKITIEANQTADFED NDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQ LEAVQEEMANEFRDLLVEKFKDSKVETFIGTFTA >gi|299856443|gb|ADWV01000008.1| GENE 105 105467 - 106003 398 178 aa, chain + ## HITS:1 COG:yfdR KEGG:ns NR:ns ## COG: yfdR COG1896 # Protein_GI_number: 16130293 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Escherichia coli K12 # 1 178 10 187 187 363 97.0 1e-100 MSFIKTFSGKHFYYDRINKDDIDINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQ EFAFEALMHDATEAYCQDIPAPLKRLLPDYKQMEEKIDAVIREKYGLPPVMSTPVKYADL IMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNELSELRKCA >gi|299856443|gb|ADWV01000008.1| GENE 106 105994 - 106356 281 120 aa, chain + ## HITS:1 COG:no KEGG:EFER_0574 NR:ns ## KEGG: EFER_0574 # Name: yfdS # Def: conserved hypothetical protein; CPS-53 (KpLE1) prophage # Organism: E.fergusonii # Pathway: not_defined # 1 120 1 120 120 233 100.0 2e-60 MRMNVFEMEGFLRGRCVPRDLKVNETDAEYLVRKFDALEAKCAAQENKVIPVSTELPPAN ESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENVNITHWAVMPKAPEAGA >gi|299856443|gb|ADWV01000008.1| GENE 107 106356 - 106661 346 101 aa, chain + ## HITS:1 COG:no KEGG:SF0298 NR:ns ## KEGG: SF0298 # Name: yfdT # Def: hypothetical protein # Organism: S.flexneri # Pathway: not_defined # 1 101 1 101 101 174 100.0 1e-42 MTTFTDKELIKEIKERISSLDVRDDIERRAYEIALLSLEVEPDEREAYELFMEKRFGDLV DRRRAKNGDNEYMAWDMTLGWIVWQQRAGIHFSTMSQQEVK >gi|299856443|gb|ADWV01000008.1| GENE 108 107383 - 108051 -35 222 aa, chain + ## HITS:1 COG:ECs0271 KEGG:ns NR:ns ## COG: ECs0271 COG0582 # Protein_GI_number: 15829525 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 222 103 324 324 437 99.0 1e-122 MLDKAPIIKVPQPKNKRIRWLEPHEAQRLIDECPEPLKSVVEFALATGLRRSNIINLEWQ QIDMQRRVAWINPEESKSNRAIGVALNDTACRVLKKQIGNHHRWVFVYKESCTKPDGTKA PTVRKMRYDANTAWKAALRRAGIDDFRFHDLRHTWASWLVQAGVPLSVLQEMGGWESIEM VRRYAHLAPNHLTEHARQIDSILNPSVPNLSQSKNKEGTNDV >gi|299856443|gb|ADWV01000008.1| GENE 109 108256 - 109509 1505 417 aa, chain - ## HITS:1 COG:ECs0270 KEGG:ns NR:ns ## COG: ECs0270 COG0014 # Protein_GI_number: 15829524 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Escherichia coli O157:H7 # 1 417 1 417 417 771 98.0 0 MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILNANAQDVADARANGLGE AMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGSVLDSGLRLERRRVPLGVIGVIYE ARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQDALKSCGLPAGAVQAIDNPD RALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVITGGIGVCHIYVDESVEIAEALK VIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQMAESGVTLHADAAALAQLQAGPAK VVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIREHGTQHSDAILTRDMRNAQRFVNEVD SSAVYVNASTRFTDGGQFGLGAEVAVSTQKLHARGPMGLEALTTYKWIGIGDYTIRA >gi|299856443|gb|ADWV01000008.1| GENE 110 109521 - 110624 1126 367 aa, chain - ## HITS:1 COG:ECs0269 KEGG:ns NR:ns ## COG: ECs0269 COG0263 # Protein_GI_number: 15829523 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 692 100.0 0 MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHL GYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDT LRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPR SNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPG VIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAGEITVDEGATAAILERGSSLLPKGI KSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAVH RDDMITR >gi|299856443|gb|ADWV01000008.1| GENE 111 110912 - 111967 1131 351 aa, chain + ## HITS:1 COG:ECs0268 KEGG:ns NR:ns ## COG: ECs0268 COG3203 # Protein_GI_number: 15829522 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli O157:H7 # 1 351 1 351 351 625 100.0 1e-179 MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYMSDNDSKDGDQSYIRFG FKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALY DVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRD VKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDAN NIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDE DLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF >gi|299856443|gb|ADWV01000008.1| GENE 112 112006 - 112407 592 133 aa, chain - ## HITS:1 COG:no KEGG:SSON_0282 NR:ns ## KEGG: SSON_0282 # Name: crl # Def: DNA-binding transcriptional regulator Crl # Organism: S.sonnei # Pathway: not_defined # 1 133 1 133 133 266 100.0 2e-70 MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNVKPAPEVREFWGWWMEL EAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLREFHEKLRELLTTLNLKLEP ADDFRDEPVKLTA >gi|299856443|gb|ADWV01000008.1| GENE 113 112465 - 113709 1142 414 aa, chain - ## HITS:1 COG:yafA KEGG:ns NR:ns ## COG: yafA COG1073 # Protein_GI_number: 16128225 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli K12 # 1 414 1 414 414 865 99.0 0 MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRG IDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEEDPQL SGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEAAQRLPGTMRQMEFTVPGGAP ITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWK LTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVV HTLLSDFKCQQQVPEMYLDVLASRLGMHDASDDALRVELNRYSLKVQGLLGRRCPTPMLS GYWKNDPFSPEEDSRLITSSSADGKLLEIPFNPVYRNFDKGLQEITGWIEKRLC >gi|299856443|gb|ADWV01000008.1| GENE 114 113801 - 114259 619 152 aa, chain - ## HITS:1 COG:ECs0265 KEGG:ns NR:ns ## COG: ECs0265 COG0503 # Protein_GI_number: 15829519 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Escherichia coli O157:H7 # 1 152 1 152 152 306 100.0 8e-84 MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCI SSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRP LVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR >gi|299856443|gb|ADWV01000008.1| GENE 115 114520 - 115977 1873 485 aa, chain + ## HITS:1 COG:ECs0264 KEGG:ns NR:ns ## COG: ECs0264 COG2195 # Protein_GI_number: 15829518 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Escherichia coli O157:H7 # 1 485 1 485 485 986 99.0 0 MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKP ATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGM ASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWLQADILINTDSEEEGEIYMGC AGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAE ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDVLKSLVNTYQEILKNELAEKEKNLAL LLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEI HCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFN KTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTELLK EIPAK >gi|299856443|gb|ADWV01000008.1| GENE 116 116034 - 116648 433 204 aa, chain - ## HITS:1 COG:STM0315 KEGG:ns NR:ns ## COG: STM0315 COG1186 # Protein_GI_number: 16763697 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Salmonella typhimurium LT2 # 1 201 1 201 204 323 81.0 1e-88 MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDG DNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADEQEQSDAIRYETLRSSGPG GQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLKSQR RMFHHQIERGNPRRTFTGMAFIEG >gi|299856443|gb|ADWV01000008.1| GENE 117 116645 - 117784 845 379 aa, chain - ## HITS:1 COG:PA5471 KEGG:ns NR:ns ## COG: PA5471 COG1690 # Protein_GI_number: 15600664 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 1 375 1 375 379 451 60.0 1e-126 MGNYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAF FSVGRFYPALVGNDIGCGMALWQTDILTRKYNADKFEKRLSDLDDVAEESWLEENLPSAF AQHPWRSSLGSIGGGNHFAELQQVDQIINAELFALAGLDAQHLQLLVHSGSRGVGQSILQ RHIASFSHHGLPQGSDDALRYIAEHDDALAFACINRQMIALRIMQQVKATGSPVLDVAHN FVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDYSWIVQPVANEKTLHSLAHGAGRKW GRTECKGRLAAKYTATQLSRTELGSRVICRDKQLIFEEAPQAYKSAESVVQCLVQAGLII PVARLRPVLTLKNSGGKKG >gi|299856443|gb|ADWV01000008.1| GENE 118 118030 - 118404 287 124 aa, chain - ## HITS:1 COG:yafP KEGG:ns NR:ns ## COG: yafP COG0454 # Protein_GI_number: 16128220 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 1 124 27 150 150 222 91.0 1e-58 MTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAKLVGFITCVEHYIDMLFVDPE YTRRGVASALLKPLIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGEWFINFYMRY KQQH >gi|299856443|gb|ADWV01000008.1| GENE 119 118479 - 119534 1038 351 aa, chain - ## HITS:1 COG:dinP KEGG:ns NR:ns ## COG: dinP COG0389 # Protein_GI_number: 16128217 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli K12 # 1 351 1 351 351 710 99.0 0 MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTG MALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSAT LIAQEIRQTIFSELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAK IPGVGKVSAAKLEAMGLRTCGDVQKCDLVILLKRFGKFGRILWERSQGIDERDVNSERLR KSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQ EHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL >gi|299856443|gb|ADWV01000008.1| GENE 120 119605 - 120528 825 307 aa, chain - ## HITS:1 COG:ECs0256 KEGG:ns NR:ns ## COG: ECs0256 COG1360 # Protein_GI_number: 15829511 # Func_class: N Cell motility # Function: Flagellar motor protein # Organism: Escherichia coli O157:H7 # 53 307 7 261 261 481 99.0 1e-136 MRKTGNRRERGAKTTIVRRQIKKNHAGHHGGAWKVAFADFTLAMMALFMTLWIVNSVSKS ERESIIAALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKK SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM QVSAMADQMLLDSKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQ VLSQRTR >gi|299856443|gb|ADWV01000008.1| GENE 121 120531 - 121394 1201 287 aa, chain - ## HITS:1 COG:YPO0746 KEGG:ns NR:ns ## COG: YPO0746 COG1291 # Protein_GI_number: 16121064 # Func_class: N Cell motility # Function: Flagellar motor component # Organism: Yersinia pestis # 1 284 1 284 288 338 66.0 5e-93 MQKILGLLVVLGCVFGGYFEAGGQLVAIWQPAEMIIILGAGFGAMIIGNPKHVLKEIAHQ IKGVISKKQLGPEFQRQLLMCLYELLEMVQNGGLRMLDQHIEQPEESTIFQKYPLVLTQK RLVTFIADNFRLMAMGKIDAHELEGILDQELDTAEESLLTPSRSLQRTAEAMPGFGICAA VLGIIITMQSIDGSIALIGLKVAAALVGTFLGVFICYCLMDPLANAMEQQARAEHSLLEC VRTVLVAQAGGKPTLLAVDAGRKLLHLASKPTFANLDAWVNAMLEQE >gi|299856443|gb|ADWV01000008.1| GENE 122 121407 - 122123 900 238 aa, chain - ## HITS:1 COG:YPO0745 KEGG:ns NR:ns ## COG: YPO0745 COG1191 # Protein_GI_number: 16121063 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Yersinia pestis # 7 234 2 230 231 224 53.0 1e-58 MLQDVFESEEFAAAPVLTPQQESHYLQAYLPLVRKVVRQLAPQCNCIIDRQDMEQTALMG LLNAIRRYGLPDEGFAGYAVHRIRGAILDELRALDWRPRQLRQKYHQMKDLIRETRKKLG HEPEWSELAVEGISHEDYLEYQQLEGAETLASLDELLNGEGPGILLAGRELEDQFVTQQM LQQALSQLSEKEQLILSMYYQHEMNLKEIALVLGLTEARICQLNKQIAQKIRDFVYPN >gi|299856443|gb|ADWV01000008.1| GENE 123 122143 - 122610 445 155 aa, chain - ## HITS:1 COG:no KEGG:ECO111_0291 NR:ns ## KEGG: ECO111_0291 # Name: lafF # Def: putative lateral flagellar biogenesis protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 155 1 155 155 270 100.0 1e-71 MKKIVVAGVVSAVLALVVGAGAGWGVWHHYAGKGKPTAAAQTETVETLDESKSVFVTLPE TIVTLHDNNGADHYLSAELVMVVASDKEAEKIKHQEPLYQSIAVECLTEMKFEDLRGMKI SAIRKLISDALKKDLQRRKMSAPYKDLLVKKVVFQ >gi|299856443|gb|ADWV01000008.1| GENE 124 122618 - 123679 879 353 aa, chain - ## HITS:1 COG:YPO0743 KEGG:ns NR:ns ## COG: YPO0743 COG3144 # Protein_GI_number: 16121061 # Func_class: N Cell motility # Function: Flagellar hook-length control protein # Organism: Yersinia pestis # 202 351 230 390 393 72 36.0 1e-12 MNPALLATLGTLAETASLKADILPPVSGENAPAFTLPKMAVAAVAERVHSAKTSQQQATR PQENDPVAMQALMALLLPQPAAPHQDTPQPRNVATSPVIQQLTKAVVQNAPQRPTQQQEL TPLPPQLQELISQLPQAKPEQQARLATYASEDLHAIAPTQPRVSTQPARPKPELTRVTAR PQVERKTEKVPDSEPVIARAVLQVKTPELVSDHQEIVAKPATLSMDELGEKLTTLLKDQI HFQLNKQQQISTIRLDPPSLGKLEIAVQLDNGKLMVHIGANQSEVCRALQQFSDDLRQHL TAQNFMEVNVQVSSEGQSQQQQQSGHQQEEVSAALQLDDAPQFQQNESVLIKV >gi|299856443|gb|ADWV01000008.1| GENE 125 123676 - 123987 194 103 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0288 NR:ns ## KEGG: ECUMN_0288 # Name: lafD # Def: Lateral flagellar chaperone protein (FliT-like) # Organism: E.coli_UMN026 # Pathway: not_defined # 1 103 1 103 103 143 97.0 2e-33 MEKQRRQLFALVEAMNEALDKQRWRRLPALHQQLIRQFHDYAAAETDAAQLCAVKARLYG AFNALIKRREQRAEVLKARMEQHQRHQEGVLAYSIVNLLSEKS >gi|299856443|gb|ADWV01000008.1| GENE 126 123992 - 124384 398 130 aa, chain - ## HITS:1 COG:YPO0741 KEGG:ns NR:ns ## COG: YPO0741 COG1516 # Protein_GI_number: 16121059 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellin-specific chaperone FliS # Organism: Yersinia pestis # 11 125 11 124 126 128 59.0 3e-30 MYQVQDGYSQYKEIDLAARTAAASPLELVLVLFSGLMDELERAKSHIEGRRFEKKAQSIN KCIDILNALTSSLEFETGGELVVNLSRLYDHCVYRLYEASGELSAEKIDEVMLILSNLRE GWEGLSGKLG >gi|299856443|gb|ADWV01000008.1| GENE 127 124407 - 125723 1314 438 aa, chain - ## HITS:1 COG:YPO0740 KEGG:ns NR:ns ## COG: YPO0740 COG1345 # Protein_GI_number: 16121058 # Func_class: N Cell motility # Function: Flagellar capping protein # Organism: Yersinia pestis # 2 437 4 418 425 134 26.0 4e-31 MINPRTIAQEIAYADVATQAANLQEKQTELDAESSGLDSLSSALSDFQSAVDALNSDTDG PVTFAATSNNDSATVSANSQAQAGSYSFFVEQLAQGQQTTFSMGDDAFSATGTFELTMGD STMDIDLSAADQNGDGDGFIDASELVNAINDSDDNPGVSAALVKTDGTTTIMLTSDSTGA QSAFSVSVTGHDASNDSTSAPVATDVSSAQDAIIHLGSATGPEITNSSNTFDDVIPGVTM TFTEVSDSDSDLTTFNISEDSSASQEKVQTFVDAYNTLIDTVDSLTTHGDDSTSAGVFAG DAGLSSLANQLDDIAHASYNGVSIVDYGITLDSHGHLQIDSDQFNDEMAKNPDGLTSIFV GDNSMVAQMDDLINTYTDSSNGIITLRQQNIDDQMSKIQDEGDQLTDTYNANYDRYLEEY TNTLVEVYTMKASMAAFA >gi|299856443|gb|ADWV01000008.1| GENE 128 125930 - 126844 1032 304 aa, chain - ## HITS:1 COG:VC2188 KEGG:ns NR:ns ## COG: VC2188 COG1344 # Protein_GI_number: 15642187 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Vibrio cholerae # 2 196 3 183 379 103 38.0 3e-22 MLSINTNNASMAAVNAISKSSSSLSTSMERLATGNRINSSADDAAGKQIANRLTAQSSGM GVALSNINDATAMLQTADSMFDEMSDVLGRMKDLSTQAANGTYSDDDLQAMQDEYDELGQ QMSDMLQNTTYGGTNLFGVSGTSNTGTDGLFQSAVTFQVGAESSDTMTVNISSQLNTLVT DLSAISNSFSADQADTTGTAGVSGGTELTASGSANQMITSISTAMDDVSQIQSKLGASIN RLNDTANNLTSMQDNTEVAIGNIMDTDYATEASNMTKQQVLMQTGITMLKQSNSMSSMVS SLLQ >gi|299856443|gb|ADWV01000008.1| GENE 129 127330 - 128172 397 280 aa, chain + ## HITS:1 COG:YPO0736_1 KEGG:ns NR:ns ## COG: YPO0736_1 COG3710 # Protein_GI_number: 16121054 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Yersinia pestis # 2 182 13 179 181 109 36.0 6e-24 MSIIINNWRMDPSLNALIHCETGETRRLGEYHFILLETLAKNADVVLSRSYLCAEVWKNR IVGGNSLPTAIHALRVAIDDDGKQQNIIKTIPKKGYLCNKEYVSLPDSSPAKKLIITDQI QETVPEEISSTTPPVTVRKKHKVIMGLALAAAVIFIGSTVGYSHLKSTPDAPQLVKESIN SPRIKIFHLSSGKENNSVPLLSQTLAPGKDKLDNLLSAHNMTMTTYYKYVRNRLESDIVL RNQCNGSWQLTFNVEGWQNSDINSAMYQNLEKLLNTLQKC >gi|299856443|gb|ADWV01000008.1| GENE 130 128227 - 129204 879 325 aa, chain - ## HITS:1 COG:no KEGG:ECO26_0278 NR:ns ## KEGG: ECO26_0278 # Name: lafW # Def: putative lateral flagellar hook associated protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 325 1 325 325 513 99.0 1e-144 MQVGLTSSSLATGGAHSAAVSSSTVAPTQAVRQKLPATASEYPASPLITTRPQRYSVQLN DQLTTLQQADHYLGQLEQQLLDYRHSQRKGGQAQNTALMQMLDKRTALSGGAVDRQLQPV LQGEARVTFHSPDLANLVHNPTPGTRMFSVSDGRQTQLSAVMLSEDDSAAQYQTRLTNAL RRVGVQVHQQADGISFSTTEKQWPHIERTLSVRTDGDKSAFMPLKTFAEPSEADRLAQSL QQGGAGISQTLESINQQRAQMAVQQEKARQLIDGMSRFPQTENAVQASENLGGVLDSANH NYQVLLQAVNGQARISSQTVRNLLG >gi|299856443|gb|ADWV01000008.1| GENE 131 129221 - 130150 1050 309 aa, chain - ## HITS:1 COG:YPO0733 KEGG:ns NR:ns ## COG: YPO0733 COG1344 # Protein_GI_number: 16121051 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Yersinia pestis # 1 309 1 307 307 135 29.0 8e-32 MRVTTQQTYVSMTQSFNNLSGDLAHVVEQMATGKQILQPSDDPIAATRITQLNRQQSAIE QYQSNIDSASAGLSQQESILDGVNNSLLAVRDDLLEAANGTNTADSLASLGQDIESLTES MVAALNYQDEDGHYVFGGTINDQPPIVAVDNDGDGVTDSYSYQGNSDHRQTTVSNGVEVD TNVAASDFFGSNLDVLNTLNSLSQELQDPNADPADPQVQSDIQNAVDVVDTASDDLNASI ASLGETQNTMSMLSDAQTDISTSNDELIGSLQDLDYGPASITFTGLEVAMEATLKTYSKV SELNLFSVL >gi|299856443|gb|ADWV01000008.1| GENE 132 130165 - 131541 1553 458 aa, chain - ## HITS:1 COG:YPO0732 KEGG:ns NR:ns ## COG: YPO0732 COG1256 # Protein_GI_number: 16121050 # Func_class: N Cell motility # Function: Flagellar hook-associated protein # Organism: Yersinia pestis # 1 456 1 452 453 288 38.0 1e-77 MDMINIGYSGASTAQVELNVTAQNTANAMTTGYTRQVAEISTIGASGGSPNSAGNGVQVD SIRRVSNQYQVNQVWYAASDYGYYSTQQGYLSQLEAVLSDDNSSLSGGFDNFFAALNEAT TSPDDSALREQVISEAGALSLRIDNTLDYIDSQSTEIISQQQAMVSQINTLTSGIASYNQ QIAQAEANGDNASALYDARDQMVEELSGMMDVQVNIDDQGNYNVTLKNGQPLVSGQQSST IALETNADGTSTMSLTFAGTTSTMTTDTGGSLGALFDYQNDVLTPLTDTINSMASQFADA VNNQLAQGYDLNGNPGEPLFIYDASNADGPLTVNPDITADELAFSSSPDESGNSDNLQAL INISTEPLEIANLGSVTVGQACSSIISNIGIYSQQNQTEVDAASNVYSAAQNQQSSVSGV SMDEEAVNLITYQQIYEANLKVISAGAEIFDSVLEMCS >gi|299856443|gb|ADWV01000008.1| GENE 133 131730 - 132029 331 99 aa, chain - ## HITS:1 COG:YPO0731 KEGG:ns NR:ns ## COG: YPO0731 COG3951 # Protein_GI_number: 16121049 # Func_class: M Cell wall/membrane/envelope biogenesis; N Cell motility; O Posttranslational modification, protein turnover, chaperones # Function: Rod binding protein # Organism: Yersinia pestis # 20 97 20 97 97 80 50.0 1e-15 MKVNASGGIDGSDALMGPKVQANDIKQAAEQFEAIFLRNMLKEMRKTNELFDSKDNPFNS DSVRMMQGFYDDELCNTLAQQHGIGIAAMIVKQLSPKHK >gi|299856443|gb|ADWV01000008.1| GENE 134 132029 - 133129 1234 366 aa, chain - ## HITS:1 COG:YPO0730 KEGG:ns NR:ns ## COG: YPO0730 COG1706 # Protein_GI_number: 16121048 # Func_class: N Cell motility # Function: Flagellar basal-body P-ring protein # Organism: Yersinia pestis # 8 366 12 370 370 427 68.0 1e-119 MQNWIKTVVVAVSLALPGVVLAQSLESLVNVQGVRENQLVGYSLVVGLDGTGDKNQVKFT NQTITNMLRQFGVQLPNKIDPKVKNVAAVAVSATLPPMYSRGQTIDVTVSSIGDAKSIRG GTLLLTQLHGADGEVYALAQGSVVVGGMNATGASGSSVTVNTPTAGLIPNGATVEREIPS DFQMGDTITLNLKRPSFKDANNIAAAINASFGGIATAQSSTNVTVRAPTSPGARVAFMSQ LDDVQVQAEKIRARVVFNSRTGTVVMGDGVALHAAAVSHGSLTVSINETSKVSQPNAFAG GRTAVTPQSNIAVNHARPGVVSLPESSSLKTLVNALNSLGATPDDIMSILQALHEAGALD ADLEVI >gi|299856443|gb|ADWV01000008.1| GENE 135 133144 - 133809 550 221 aa, chain - ## HITS:1 COG:YPO0729 KEGG:ns NR:ns ## COG: YPO0729 COG2063 # Protein_GI_number: 16121047 # Func_class: N Cell motility # Function: Flagellar basal body L-ring protein # Organism: Yersinia pestis # 1 221 1 221 221 305 67.0 5e-83 MKNYLWLVALLPLLSGCESQAILVKKDDAYFAPPKTEAPPPADGRAGGVFETGYNWSLTA DRRAYRVGDILTVILEESTQSSKQAKTNFGKSNTVDIGAPTIFGHTKDKLSGSIDANRDF DGSATSQQQNSLRGEITVSVHAVQPNGILEIRGEKWLTLNQGDEYIRLSGLARADDIQND NSVSSQRIADARISYAGRGALSDANAAGWLTRLFNHPLFPI >gi|299856443|gb|ADWV01000008.1| GENE 136 133892 - 134677 993 261 aa, chain - ## HITS:1 COG:YPO0728 KEGG:ns NR:ns ## COG: YPO0728 COG4786 # Protein_GI_number: 16121046 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Yersinia pestis # 1 261 1 261 261 318 66.0 7e-87 MNAALWFSKTGLSAQDAEMSAIANNIANVNTTGFKRDRVMFQDLFYQTQEAPGAMLDQNN IMPTGLQFGSGVRIVGTQKTFTEGNVETTDNAMNVAIMGQGFLQVQKANGDIAYTRDGNL QVNADGVLTISQGLPLQPEIDVPAGATNVAFGEDGTVTAILPGDSDVTELGQLTLVNFAN PAGLSAEGDNLYLETAASGQPTEGVPGEDGLGTLQDNALEGSNVDIVNEMVAMITVQRAY EMNAKMVSAADDMLQYISQTL >gi|299856443|gb|ADWV01000008.1| GENE 137 134704 - 135441 897 245 aa, chain - ## HITS:1 COG:VC2196 KEGG:ns NR:ns ## COG: VC2196 COG4787 # Protein_GI_number: 15642195 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Vibrio cholerae # 1 245 1 249 249 164 43.0 1e-40 MDRLIYTALSGASQTLYEQQISANNLANVNTNGFRADMAMATNNKVKGGGFDTRYMAQEG ASGVNDSTGVAEKTERPLDVAIQGAGYIAVQDKNGNEVYTRNGNIQQDDQGQLTIDGNLV LGDNGPIILPPNAIASFGSDGTLSVTPDDGDVTATMDIDRLKLVDIPVANLAKNPEGMLV TADGVPAQRDENIKVSGGFLEGSNVSAVSEMMSSIAMNRQFEAQIKMMKTAEDISDAGNR LLRGS >gi|299856443|gb|ADWV01000008.1| GENE 138 135441 - 136643 1249 400 aa, chain - ## HITS:1 COG:YPO0725 KEGG:ns NR:ns ## COG: YPO0725 COG1749 # Protein_GI_number: 16121044 # Func_class: N Cell motility # Function: Flagellar hook protein FlgE # Organism: Yersinia pestis # 1 400 1 413 413 301 47.0 1e-81 MSYEIAATGLNAVNEQLDGISNNIANAGTVGYKSMTTQFSAMYAGSQAMGVSVAGTAQSI SRGGSLVSTGNALDLAINNDGFFVTCDSAGNISYTRAGSFETDKNGYIVNASGAYLQGYP VDDTGTLQTGTVTDIQIKTGNIPAQASSSLTFTANFDASDDAIDRTTVPFDATNSSSYTD SYTTTVYDSLGNEHSVCQYFTKTSDNTWEVQYTFDGQQQTGVPATTLTFDPNTGKLTSPT TPQTIEFQTDAAAPIDLTVDYSTCTQYGSEFSVTTNAANGYASATQNGVQVDDDGKVYAT YSNGERMLQGQVVLATFPNENGLEAVSGTAWVQTGESGTPLIGVPGSGTCGTLSSGVLES SNVDITSELVNLMTAQRNYQANTKVIATSTQLDDALFQAM >gi|299856443|gb|ADWV01000008.1| GENE 139 136728 - 137441 808 237 aa, chain - ## HITS:1 COG:YPO0724 KEGG:ns NR:ns ## COG: YPO0724 COG1843 # Protein_GI_number: 16121043 # Func_class: N Cell motility # Function: Flagellar hook capping protein # Organism: Yersinia pestis # 37 228 31 217 218 137 40.0 1e-32 MNTLALNAQSPQPTATQESSNVAASDTQSSSDSSPVDTFLTLFVAEIQNQDPTDPTDATE YIDQLSSMAQVAMMEEMSVQANTNAVLMSNIQVMALGNLVGDDIMVQTTALQVSDQTING RATLDDACTTADLHFTDAAGDDYTVSLIPQGSSSVGPGQVDFSVNPADYGIPPGDYDVSV VTNTGEEEVPIEVSGEVEDVRIPLDGSSPVLNVAGVGEVPFTMISQFGVPDADSDVA >gi|299856443|gb|ADWV01000008.1| GENE 140 137441 - 137872 582 143 aa, chain - ## HITS:1 COG:YPO0723 KEGG:ns NR:ns ## COG: YPO0723 COG1558 # Protein_GI_number: 16121042 # Func_class: N Cell motility # Function: Flagellar basal body rod protein # Organism: Yersinia pestis # 1 142 1 140 141 157 65.0 6e-39 MSFTDIYQISGSAMTAQTLRLNTVASNLANANAPASSEAQAYKARSPVFAAVYHHSLLAG THRHAIDSASVQVQDVLQTGGAVKRYEPHSPLADANGDVWYPDVNVVEQMADMMSASRDF ETNVDVLNNVKSMQQSLLKLGEA >gi|299856443|gb|ADWV01000008.1| GENE 141 137875 - 138210 269 111 aa, chain - ## HITS:1 COG:YPO0722 KEGG:ns NR:ns ## COG: YPO0722 COG1815 # Protein_GI_number: 16121041 # Func_class: N Cell motility # Function: Flagellar basal body protein # Organism: Yersinia pestis # 1 111 1 148 148 125 50.0 2e-29 MGISFQQALGVHPQAVKLRLERTELLTANLANVDTPNFKAKDIDFAREMQRANNAAVDVQ YRVPMQPSEDGNTVELNSEQARFSQNSMDYQSSLTFLNLQISGIREAIEGK >gi|299856443|gb|ADWV01000008.1| GENE 142 138292 - 139029 537 245 aa, chain + ## HITS:1 COG:YPO0721 KEGG:ns NR:ns ## COG: YPO0721 COG1261 # Protein_GI_number: 16121040 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar basal body P-ring biosynthesis protein # Organism: Yersinia pestis # 24 239 12 229 237 142 34.0 6e-34 MSFQFCRRKFYFLLALALPGYAAVHPVQHSAREQVNAQVLNAASQKIESLAQQRQWHDYR YTFKIYIPSQIATAAPCTKTPGVTLTSPAEIALNRMNFTVSCPQSWQMNVAVRPDVLVPV VMTKSLVARDMPLTANDVELKPYNVSAQRRDVLMELDDAIGLSSKHALQPGRPITKEELV SPVLVGRDQPVMIVYQSAGITASMPGVALKNGRKGEMVKVRNASSQWVISAMVAESGVVT TVSAE >gi|299856443|gb|ADWV01000008.1| GENE 143 139110 - 139388 321 92 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_0261 NR:ns ## KEGG: EcSMS35_0261 # Name: lfgM # Def: lateral flagellar anti-sigma factor 28 protein LfgM # Organism: E.coli_SECEC # Pathway: Flagellar assembly [PATH:ecm02040] # 1 92 1 92 92 99 95.0 3e-20 MKITPTMPGNRPTATTAGSNQPRKTTATTTTTLSADDITQAGLQSAQQTLNDQQESDIDS DKVAQMQAMLASGSLQVDTEQLASDMLSFFQN >gi|299856443|gb|ADWV01000008.1| GENE 144 139401 - 139829 390 142 aa, chain + ## HITS:1 COG:no KEGG:EcolC_3374 NR:ns ## KEGG: EcolC_3374 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ATCC8739 # Pathway: Flagellar assembly [PATH:ecl02040] # 1 142 1 142 142 240 100.0 1e-62 MSIRLQQVKALLQGIRDDDALYDSLRERLQRQRICMIRRASEELLAVNEEITHHYEQLHG HSHQRHSLLKMLGVSVNRDGLAQVFAWLPAVQKAAAQQLWQRLEQKAERCKAYNDKNGEL LIRQYEFIQSFLGSEADFLYQE >gi|299856443|gb|ADWV01000008.1| GENE 145 139956 - 140885 775 309 aa, chain + ## HITS:1 COG:no KEGG:ECO111_0268 NR:ns ## KEGG: ECO111_0268 # Name: lafV # Def: putative lateral flagellar associated protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 309 1 309 309 556 99.0 1e-157 MSFIECYEPEYVRKFLARHPGSPLYVRKVWKNEIRLSLSLTDIASCEAVLNDVRAFDLQL TYRPVEDNSAELSARDAIVNQVILSTLTLRDLTPELSLYAVGILLSRASKMPGRDGDILA RLTTLPLALADHAKKGTLQAQYAQLPPVPQLARQLMTLLGGCAFDWSILPESPRKASLPL QVTLLTLHDANSEALLQQQLQTQWQTTWQQHFATAPWMMRNWLIYRVYHDVIGQTDGADY FPLVCDFYLLRTLISLWTLDGSPLRQEDIFALFAMFERWRASENALLVRQQIQSLCAADP LLSAFSLLT >gi|299856443|gb|ADWV01000008.1| GENE 146 141064 - 143508 1961 814 aa, chain + ## HITS:1 COG:YPO1382 KEGG:ns NR:ns ## COG: YPO1382 COG3306 # Protein_GI_number: 16121662 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase involved in LPS biosynthesis # Organism: Yersinia pestis # 258 458 6 218 224 108 32.0 4e-23 MPTPTIIKTLATHREKPFVSVVTPTWNRGAFLPYLLYMYRYQDYPADRRELIILDDSPQS HQHIIDRLTNGTPEAFNIRYIHQPEKLPLGKKRNMLNELARGEYILCMDDDDYYPADKIS YTIAMMQKHRALISGSDQIPIWYSHINRIFQSRSFGPHNILNGTFCYHRNYLKKHRYDDD CNLGEEKSFTDNFSVNPLQLPGERTILCFSHSHNTFDKDFIIGASTPVNTALTDIVRDPL LRNAYLSLHNATHHQAINHQAIDQVVVVNLDKRPDRLQQIREELALLHIPPEKITRLAAS EDENGQRGRRQSHLQALRLAQQHGWQNYLLLEDDAVILKQEKHIQVLNTLLASLAKIPWQ VMLLGGEISQGTMLKSLPGLVHARDCRKVCAYLVNSRCYPQLAQQMSNDEHSLEDGWQPL LRTDKWLACYPSLCYQRPGFSDIEKKITDNISYYFNKLPVATKPSTLPIADTIGFFMETS FHYTLYRPIITALQAQGQSCTLVINDRVFKPFLDEMLETLKNIDDPQLKGMRLSEMQTHG QRVKCLVSPYHTPALNGLAAVNIRAMYGLAKETWNHADWNRFYQSILCYSHYSQQALAHF GSAKVVGNPRFDAWHNGTFDRALPENIQSDYRKPTVLYAPTFGALSSLPHWAEKLGRLSG DVNLICKLHHGTCSRPEEAASLALVRRHLKQRTDSARHTLALLAKADYVLTDNSGFIFDA IHVDKRVILLDFPGMNDLLDGEKSYSTAESADQRIREILPVAHDVAELRYLLSEAFDWGS VQARLTEIRHHYCDAFMDGKAGERAAIVIVEALG >gi|299856443|gb|ADWV01000008.1| GENE 147 143626 - 144021 339 131 aa, chain - ## HITS:1 COG:aq_1368 KEGG:ns NR:ns ## COG: aq_1368 COG0615 # Protein_GI_number: 15606564 # Func_class: M Cell wall/membrane/envelope biogenesis; I Lipid transport and metabolism # Function: Cytidylyltransferase # Organism: Aquifex aeolicus # 2 127 6 130 168 136 52.0 1e-32 MKTVITFGTFDVFHVGHLRLLQRARALGERLLVGVSSDALNIAKKGRAPVYHQDDRMAII AGLACVDGVFLEESLEQKAEYLRGYSADILVMGDDWAGKFDSFAYICEVVYFPRTPSVST TGIIEVIRGLL >gi|299856443|gb|ADWV01000008.1| GENE 148 144024 - 144458 438 144 aa, chain - ## HITS:1 COG:no KEGG:EcolC_3378 NR:ns ## KEGG: EcolC_3378 # Name: not_defined # Def: flagellar export protein FliJ # Organism: E.coli_ATCC8739 # Pathway: not_defined # 1 144 1 144 144 216 100.0 2e-55 MRQIIDTLAQLQRLRDKSVKDKTVELAKQKQICAGYDNNIKALGYLVEKTSAGAAVSVES LKNVSGYKGTLRKVIAWQEQEKTLANIKATRMQKNLTAAACEEKVVALTLDDKRREQQES ATAKAQKAVDDIAVQCWLRHKLVE >gi|299856443|gb|ADWV01000008.1| GENE 149 144461 - 145798 1328 445 aa, chain - ## HITS:1 COG:YPO0717 KEGG:ns NR:ns ## COG: YPO0717 COG1157 # Protein_GI_number: 16121036 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway ATPase # Organism: Yersinia pestis # 1 445 1 445 446 634 72.0 0 MSDFSAFDNALRSLESIPLARVAGRLVRLNGILLESVGCPLMTGQLCRIESANHTLIDAQ AVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRLN GNDLLPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLGMI TRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELCHS IAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAGNS ESAGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSISRCM NQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLRQEM REPASLELVQSRLQILFPGVKKAEQ >gi|299856443|gb|ADWV01000008.1| GENE 150 145791 - 146501 864 236 aa, chain - ## HITS:1 COG:YPO0716 KEGG:ns NR:ns ## COG: YPO0716 COG1317 # Protein_GI_number: 16121035 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway protein # Organism: Yersinia pestis # 9 236 14 239 239 202 46.0 4e-52 MTIETLRGRYRLHRFPPRQRAVTGEPLTTSISAADYQRQLMDGFQEGLQKGFAQGMTEGQ EQGFSEGHQQGFAEGRRQGYTEGSLAGQQEGRKQFVEAAQPLEAITGKVNDFLAHIERKQ REDLLQLVEKVTRQVIRCELALQPTQLLALVEEALAAFPAMPETLQVMLSTEEFNRLRDA VPEKVSEWGLTPSPDLPPGECRVITDKSELDIGCEHRLEQCMTALKETLTPESQGE >gi|299856443|gb|ADWV01000008.1| GENE 151 146504 - 147514 1266 336 aa, chain - ## HITS:1 COG:YPO0715 KEGG:ns NR:ns ## COG: YPO0715 COG1536 # Protein_GI_number: 16121034 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Yersinia pestis # 13 336 1 324 324 400 69.0 1e-111 MSELTTNKSNSYLEQAAILLLCLGEEAAATVMQKLSREEVVRLSENMARLSGVKTSMARK VINNFFDEFREQSGINGASRSMLQGILNKALGTEIASSVINGIYGDEIRSRMARLQWVEP RQLAMLISEEHLQLQAVFLAFLTPEISAAVLSYLNESVQNEILYRVAKLNDVNRDVVDEL DRLIERGLSVLSEHGSKVKGIKQAADIVNRFQGNQQVILDQMRERDEEVLEQLQDEMYDF FILSRQNEEVRRRLLDEVPMEDWAVALKGTEALLRRSIYAVMPKRQAQQLEAITARLGPV PVSRIEQIRREIMGIARELEEAGEIQLQLFAEQTAE >gi|299856443|gb|ADWV01000008.1| GENE 152 147492 - 149138 1709 548 aa, chain - ## HITS:1 COG:YPO0714 KEGG:ns NR:ns ## COG: YPO0714 COG1766 # Protein_GI_number: 16121033 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway lipoprotein # Organism: Yersinia pestis # 18 548 13 544 546 441 45.0 1e-123 MNAQIKKLTQAFPAFRLRLADNKRWALMAGVGLAVAATAIIVSVLWTGNRGYVSLYGRQE NLPVSQIVTVLDGEKLTYRIDPQSGQILVPEEALSKTRMTLAAKGVQAILPSGYELMDKD EVLGSSQFVQNVRYKRSLEGELAQSIMSLDAVESARVHLALNEESSFVVSDEPQNSASVV VRMHYGAKLNMDQVNAIVHLVSGSIPGLHASKVSVVDQAGNLLTDGIGAGEAVSAATRKR DQILKDIQDKTRASVANVLDSLVGTGNYRVSVMPDLDLSTIDETQEHYGDAPKINREESV LDSDTNQVAMGVPGSLSNRPPVAANQMTNGTEENRSPEALSKHSESKRDYSYDRSVQHIQ HPGFAVKRLNVAVVLNQNAPALKNWKPEQTTQLTALLNNAAGIDAQRGDNLTLSLLNFVP QVVPVEPVIPLWKDDSVLAWVRLIGCGLLALLLLFFVVRPVMKRLTAVRAPVITPEPEAV SEPWIAMPEEECKNVDLPSLPGDDSLPSQSSGLEVKLEFLQKLAMSDTDRVAEVLRQWIT SNERIDNK >gi|299856443|gb|ADWV01000008.1| GENE 153 149143 - 149484 376 113 aa, chain - ## HITS:1 COG:YPO0713 KEGG:ns NR:ns ## COG: YPO0713 COG1677 # Protein_GI_number: 16121032 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar hook-basal body protein # Organism: Yersinia pestis # 11 113 13 126 126 68 42.0 2e-12 MSITTINSTMQAQIMQDVQRMQANAQAPVLPAMTFSSTDPDVSFHRIMQGALGHVDQFQQ VAEQQQTAIDMGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI >gi|299856443|gb|ADWV01000008.1| GENE 154 149499 - 150485 942 328 aa, chain - ## HITS:1 COG:YPO0712 KEGG:ns NR:ns ## COG: YPO0712 COG2204 # Protein_GI_number: 16121031 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Yersinia pestis # 4 326 16 338 342 378 58.0 1e-104 MSELIATAASSINAFTLAKRVAAFNVPVLIQGETGAGKECVAKYIHTVAFGENENAPYIG VNCAAIPENMLEATLFGYDKGAFTGAIASVPGKMELANNGTLLLDEIGDMPLALQAKILR VLQEQQVERLGSNRQIKLNFRLIACTNKNLEQEVAAGRFREDLYYRLAVIPITMPPLRER LNDIIPLAESFIKKYSTVLVKNITLSESTRRAMLNYRWPGNVRQLENAIQRGMILNRDGV IYPDALGLSENDVADRSELQWPAQPTAHIAETSDLGQHGRSAQYQYIADLMRKYQGNRSK IADLLGITPRALRYRLASMRKHGIEVFS >gi|299856443|gb|ADWV01000008.1| GENE 155 150872 - 151723 841 283 aa, chain + ## HITS:1 COG:no KEGG:ECO111_0258 NR:ns ## KEGG: ECO111_0258 # Name: lfiM # Def: putative lateral flagellar export/assembly protein # Organism: E.coli_O111_H- # Pathway: Bacterial chemotaxis [PATH:eoi02030]; Flagellar assembly [PATH:eoi02040] # 1 283 1 283 283 548 100.0 1e-155 MLKYSKTPGIFKLEGNRLGRPYHRLPTLFTGNFDVIDSHLGSYFLKKHRSNITLKKIGCE MDIINKNAELMVSQVGHLAFDIDRSLLLMLLGNFYGLESSLEEAKAHNGLPTKTETRLKN RLALDICTLIFNLQTSGIALKLKLDSSTVITHWAYQLTFTLAGDEESCFRILLDDAHTDF ILNLIRHSEHSKPQQVAKSVNKPALIKEIIRSLPLTLNVKIAELSMNVADLTQIKAGDIL PISLGETFPVAIGQSELFSALIVEDKDKLFLSELAGKNENSHE >gi|299856443|gb|ADWV01000008.1| GENE 156 151716 - 152087 473 123 aa, chain + ## HITS:1 COG:YPO0710 KEGG:ns NR:ns ## COG: YPO0710 COG1886 # Protein_GI_number: 16121029 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar motor switch/type III secretory pathway protein # Organism: Yersinia pestis # 36 122 50 136 137 99 62.0 1e-21 MSKQEDILAGDFGLTDEVAPVAKSADAETLVTRLEDRFSDSMTLLKRIPVTLTLEVSSVE IMLADLLNIDDDTVIELDKLAGEPLDIKVNNILLGKAEVVVVNEKYGLRVLEFNTRDIND LAP >gi|299856443|gb|ADWV01000008.1| GENE 157 152084 - 152914 1016 276 aa, chain + ## HITS:1 COG:YPO0709 KEGG:ns NR:ns ## COG: YPO0709 COG1338 # Protein_GI_number: 16121028 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliP # Organism: Yersinia pestis # 9 247 18 256 256 259 67.0 3e-69 MKRRTQLTLGLGLLALAPVALAQGGDIALLNVVTHGNTQEYSVKIQVLILMTLVGLLPTM VLMMTCFTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLNIYDHAVVPFE NDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIGGAKGHAADQDLSIVVPAYVLSEL KTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLIDGWSLTIGTL TTSIRGLGLGVCGKWMIIQLHDLCIHLFTQAALLVH >gi|299856443|gb|ADWV01000008.1| GENE 158 152943 - 153698 827 251 aa, chain + ## HITS:1 COG:YPO0707 KEGG:ns NR:ns ## COG: YPO0707 COG1684 # Protein_GI_number: 16121026 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliR # Organism: Yersinia pestis # 5 248 13 257 257 232 56.0 6e-61 MDLALGLWFPFVRIMAFLRYVPVLDNSALTVRVRIILSLALAIIITPLIPHPVPHDLISL NSLILTVEQILWGMLFGLMFQFLFLALQLAGQILSFNMGMSMAVMNDPSSGASTTVLAEL INVYAILLFFAMDGHLLLVSVLYKGFTYWPIGNALHPQTLRTIALAFSWVLASASLLALP TTFIMLIVQGCFGLLNRIAPPLNLFSLGFPINMLAGLVCFATLLYNLPDHYLHLANFVLQ QLDALKGHYGG >gi|299856443|gb|ADWV01000008.1| GENE 159 153688 - 154827 1218 379 aa, chain + ## HITS:1 COG:YPO0706 KEGG:ns NR:ns ## COG: YPO0706 COG1377 # Protein_GI_number: 16121025 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Yersinia pestis # 4 377 3 376 377 389 50.0 1e-108 MADSSSEEKTEKPSAQKLRKAREEGQLPRSKDMGLAASLFAAFVVISSSFPWYADFVRES FISVHQYAQEINNPEVIGQFLRHHLLILGKFILTLLPMPAAALLSSLVPGGWLFLPKKIL PDFSKISPLKGIGRLFSSEHLAETGKMTVKSVVVLVMLWVSLRNNFASFLGLQALPFKLA MNEGLSLYACVMRNFVILFIFFALIDVPLAKALFTKGLKMTKQELKEEYKNQEGKPEVKA RVRRLQRQLAMGQIRKVVPKANVVITNPTHYAVALQYDSSRAAAPFVVAKGTDEIALYIR QVAAENQVEVVEFPRLARSVYYTTQVNQQIPFQLYRAIAHVLTYVLQMKHWREGAQPRPA LNRHISIPKEVLKLDGENN >gi|299856443|gb|ADWV01000008.1| GENE 160 154811 - 156904 2375 697 aa, chain + ## HITS:1 COG:ECs0257 KEGG:ns NR:ns ## COG: ECs0257 COG1298 # Protein_GI_number: 15829510 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhA # Organism: Escherichia coli O157:H7 # 125 697 7 579 579 1078 98.0 0 MAKTTKSFLALLRGGNLGVPLVILCILAMVILPLPPALLDILFTFNIVLAVMVLLVAVSA KRPLEFSLFPTILLITTLMRLTLNVASTRVVLLHGHLGADAAGKVIESFGQVVIGGNFVV GFVVFIILMIINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQTRR KDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYVLM TIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRHQLLASPSVLYTATGIMFVLAVV PGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIE PISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYAIF INGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPAQKAKALNMGYQV IDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLASMAPRLAEDLSAVLNYSQLLKVYR ALLTEGVSLRDIVTIATVLVASSAVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLN NELENLLTNLVNQAQQGGKVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQ LRPLLARYARLFAPGLHVLSYNEVPDELELKIMGALS >gi|299856443|gb|ADWV01000008.1| GENE 161 157009 - 157287 185 92 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_0269 NR:ns ## KEGG: ECIAI1_0269 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 92 8 99 99 184 100.0 9e-46 MIKVSALGSRHRKTFDDVMTEPPKSGIKWDDVVALIKAVGGTIKNNNGSRRKFQIGTTKF STHEPHPKNVMDKGAVAGLKEWFVNCVGVDYE >gi|299856443|gb|ADWV01000008.1| GENE 162 157280 - 157636 260 118 aa, chain + ## HITS:1 COG:ECs4356 KEGG:ns NR:ns ## COG: ECs4356 COG4226 # Protein_GI_number: 15833610 # Func_class: S Function unknown # Function: Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters # Organism: Escherichia coli O157:H7 # 3 115 5 117 119 105 43.0 2e-23 MNKASNIITIKGQPAAVTFEADINAFRGKFLNVNGYCDFVATSIEALYREGESALDEWMA DCEEDGIAPFREEEEQKRLTLRVPHHIDSRLTIVARQHSISKNQLIVDVLEREFSAQM >gi|299856443|gb|ADWV01000008.1| GENE 163 157693 - 158319 350 208 aa, chain - ## HITS:1 COG:yafL KEGG:ns NR:ns ## COG: yafL COG0791 # Protein_GI_number: 16128213 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Escherichia coli K12 # 1 208 42 249 249 418 98.0 1e-117 MQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRRWQ ALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILEA KLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGET IRVSRLAEPFWQDHFLGARRILTEETIL >gi|299856443|gb|ADWV01000008.1| GENE 164 158651 - 158911 392 86 aa, chain + ## HITS:1 COG:dinJ KEGG:ns NR:ns ## COG: dinJ COG3077 # Protein_GI_number: 16128212 # Func_class: L Replication, recombination and repair # Function: DNA-damage-inducible protein J # Organism: Escherichia coli K12 # 1 86 1 86 86 144 98.0 4e-35 MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQ SIKNSEAGVDVHKAKDADDLFDKLGI >gi|299856443|gb|ADWV01000008.1| GENE 165 158914 - 159192 143 92 aa, chain + ## HITS:1 COG:yafQ KEGG:ns NR:ns ## COG: yafQ COG3041 # Protein_GI_number: 16128211 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 92 1 92 92 180 97.0 5e-46 MIQRDIEYSGQFSKDVKVAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYR DAHVEPDWILIYKLTDKLLRFERTGTHAALFG >gi|299856443|gb|ADWV01000008.1| GENE 166 159348 - 160088 836 246 aa, chain + ## HITS:1 COG:ECs0251 KEGG:ns NR:ns ## COG: ECs0251 COG3034 # Protein_GI_number: 15829505 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 246 1 246 246 491 100.0 1e-139 MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNA YDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRMTD ANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLASNY TLPEAK >gi|299856443|gb|ADWV01000008.1| GENE 167 160059 - 160826 622 255 aa, chain - ## HITS:1 COG:yafJ KEGG:ns NR:ns ## COG: yafJ COG0121 # Protein_GI_number: 16128209 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Escherichia coli K12 # 1 255 1 255 255 548 100.0 1e-156 MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFNSPI AKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETG NFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIASLADELRQKGVFNMLLSDGR YVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTTPNDVVTVIATQPLTGNETWQKI MPGEWRLFCLGERVV >gi|299856443|gb|ADWV01000008.1| GENE 168 161032 - 161610 782 192 aa, chain - ## HITS:1 COG:ECs0249 KEGG:ns NR:ns ## COG: ECs0249 COG0279 # Protein_GI_number: 15829503 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Escherichia coli O157:H7 # 1 192 1 192 192 373 100.0 1e-103 MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM HFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGIST SGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIH ILIQLIEKEMVK >gi|299856443|gb|ADWV01000008.1| GENE 169 161850 - 163365 1804 505 aa, chain + ## HITS:1 COG:yafH KEGG:ns NR:ns ## COG: yafH COG1960 # Protein_GI_number: 16128207 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli K12 # 1 505 13 517 826 1038 99.0 0 MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWSAWVLVPLAIILVPFNF APMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRL TAEEQAFLAGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSA YAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKDHYLPRLARGQEIPCFAL TSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEK LLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKMAG QGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARI AGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQS NFLARAYQGAPIAITVEGANILTRS Prediction of potential genes in microbial genomes Time: Sun May 15 15:23:37 2011 Seq name: gi|299856442|gb|ADWV01000009.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont8.1, whole genome shotgun sequence Length of sequence - 163082 bp Number of predicted genes - 163, with homology - 159 Number of transcription units - 94, operones - 33 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . - CDS 874 - 1824 1012 ## COG0176 Transaldolase - Prom 1971 - 2030 3.3 + Prom 1933 - 1992 3.5 3 2 Tu 1 . + CDS 2113 - 4392 2673 ## COG0281 Malic enzyme + Prom 4455 - 4514 5.5 4 3 Op 1 4/0.346 + CDS 4685 - 5020 432 ## COG4810 Ethanolamine utilization protein 5 3 Op 2 4/0.346 + CDS 5033 - 5512 365 ## COG4917 Ethanolamine utilization protein 6 3 Op 3 4/0.346 + CDS 5487 - 6188 752 ## COG4766 Ethanolamine utilization protein 7 3 Op 4 4/0.346 + CDS 6185 - 6988 909 ## COG4812 Ethanolamine utilization cobalamin adenosyltransferase 8 3 Op 5 1/0.885 + CDS 6985 - 8001 843 ## COG0280 Phosphotransacetylase 9 3 Op 6 4/0.346 + CDS 8040 - 8333 489 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein + Term 8341 - 8378 5.6 10 4 Op 1 4/0.346 + CDS 8440 - 8727 264 ## COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein 11 4 Op 2 4/0.346 + CDS 8739 - 10142 837 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P 12 4 Op 3 2/0.808 + CDS 10153 - 10989 908 ## COG4820 Ethanolamine utilization protein, possible chaperonin 13 4 Op 4 2/0.808 + CDS 10979 - 12166 1128 ## COG1454 Alcohol dehydrogenase, class IV + Prom 12190 - 12249 2.4 14 5 Op 1 4/0.346 + CDS 12283 - 13509 1675 ## COG3192 Ethanolamine utilization protein 15 5 Op 2 5/0.231 + CDS 13506 - 14909 1476 ## COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition 16 5 Op 3 8/0.038 + CDS 14921 - 16282 1579 ## COG4303 Ethanolamine ammonia-lyase, large subunit 17 5 Op 4 6/0.115 + CDS 16303 - 17190 1088 ## COG4302 Ethanolamine ammonia-lyase, small subunit 18 5 Op 5 4/0.346 + CDS 17200 - 17859 748 ## COG4816 Ethanolamine utilization protein 19 5 Op 6 2/0.808 + CDS 17872 - 18372 465 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 20 5 Op 7 . + CDS 18418 - 19470 931 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 19201 - 19234 -0.6 21 6 Op 1 4/0.346 - CDS 19476 - 20375 730 ## COG0408 Coproporphyrinogen III oxidase 22 6 Op 2 . - CDS 20379 - 21248 845 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 21357 - 21416 4.2 + Prom 21375 - 21434 4.3 23 7 Op 1 . + CDS 21462 - 21887 570 ## COG0456 Acetyltransferases 24 7 Op 2 . + CDS 21874 - 22323 297 ## G2583_2964 hypothetical protein 25 7 Op 3 . + CDS 22384 - 22959 484 ## SDY_2630 hypothetical protein + Term 23015 - 23046 2.1 26 7 Op 4 . + CDS 23055 - 23954 1146 ## COG2837 Predicted iron-dependent peroxidase + Term 23978 - 24017 5.3 - Term 23966 - 24005 5.3 27 8 Op 1 1/0.885 - CDS 24012 - 25316 1242 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 28 8 Op 2 9/0.000 - CDS 25321 - 26745 1593 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 29 8 Op 3 . - CDS 26749 - 27645 932 ## COG2103 Predicted sugar phosphate isomerase - Prom 27686 - 27745 6.4 + Prom 27618 - 27677 3.5 30 9 Tu 1 . + CDS 27809 - 28666 782 ## COG1737 Transcriptional regulators + Prom 28687 - 28746 3.9 31 10 Tu 1 . + CDS 28795 - 29586 248 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 29599 - 29635 5.1 + Prom 29676 - 29735 4.8 32 11 Op 1 7/0.038 + CDS 29757 - 30773 1397 ## COG4150 ABC-type sulfate transport system, periplasmic component 33 11 Op 2 17/0.000 + CDS 30773 - 31606 946 ## COG0555 ABC-type sulfate transport system, permease component 34 11 Op 3 17/0.000 + CDS 31606 - 32481 1092 ## COG4208 ABC-type sulfate transport system, permease component 35 11 Op 4 5/0.231 + CDS 32471 - 33568 1478 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component 36 11 Op 5 . + CDS 33624 - 34613 562 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 37 12 Tu 1 . - CDS 34616 - 34984 405 ## ECO103_2938 hypothetical protein - Prom 35075 - 35134 2.5 + Prom 34947 - 35006 3.1 38 13 Tu 1 . + CDS 35089 - 35940 850 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase + Term 35945 - 35975 3.0 - Term 35932 - 35962 3.0 39 14 Op 1 10/0.000 - CDS 35982 - 36491 691 ## COG2190 Phosphotransferase system IIA components 40 14 Op 2 25/0.000 - CDS 36532 - 38259 1832 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 41 14 Op 3 6/0.115 - CDS 38304 - 38561 377 ## COG1925 Phosphotransferase system, HPr-related proteins - Prom 38725 - 38784 5.8 - Term 38889 - 38916 0.1 42 15 Tu 1 8/0.038 - CDS 38945 - 39916 702 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 39949 - 40008 4.4 - Term 40029 - 40061 4.1 43 16 Tu 1 . - CDS 40101 - 40736 544 ## COG2981 Uncharacterized protein involved in cysteine biosynthesis - Prom 40901 - 40960 3.3 + Prom 40860 - 40919 2.7 44 17 Op 1 7/0.038 + CDS 41095 - 42078 767 ## COG3115 Cell division protein + Term 42110 - 42138 1.3 45 17 Op 2 3/0.615 + CDS 42149 - 44164 2212 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 46 17 Op 3 . + CDS 44166 - 44384 271 ## COG3530 Uncharacterized protein conserved in bacteria + Term 44388 - 44432 -0.8 - Term 44325 - 44370 3.1 47 18 Tu 1 . - CDS 44381 - 45379 755 ## COG0385 Predicted Na+-dependent transporter - Prom 45436 - 45495 5.0 + Prom 45384 - 45443 3.7 48 19 Tu 1 . + CDS 45469 - 46395 611 ## COG0583 Transcriptional regulator - Term 46385 - 46432 2.5 49 20 Tu 1 . - CDS 46434 - 47198 787 ## ECS88_2597 hypothetical protein - Prom 47413 - 47472 3.9 + Prom 47182 - 47241 3.8 50 21 Op 1 1/0.885 + CDS 47447 - 48280 952 ## COG0005 Purine nucleoside phosphorylase 51 21 Op 2 . + CDS 48340 - 49596 899 ## COG0477 Permeases of the major facilitator superfamily + Term 49605 - 49639 5.2 52 22 Op 1 . + CDS 49649 - 49807 116 ## EcSMS35_2559 hypothetical protein 53 22 Op 2 4/0.346 + CDS 49848 - 50732 447 ## COG0583 Transcriptional regulator + Term 50816 - 50842 0.1 - TRNA 50997 - 51072 99.5 # Lys TTT 0 0 - TRNA 51077 - 51152 94.3 # Val TAC 0 0 - TRNA 51197 - 51272 94.3 # Val TAC 0 0 + Prom 51413 - 51472 4.9 54 23 Tu 1 . + CDS 51531 - 52946 1743 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 52961 - 53006 6.3 - Term 52955 - 52989 3.5 55 24 Op 1 . - CDS 52998 - 53390 213 ## JW2394 predicted DNA-binding transcriptional regulator 56 24 Op 2 . - CDS 53392 - 53751 345 ## SDY_2596 hypothetical protein - Prom 53783 - 53842 5.6 + TRNA 53972 - 54047 86.5 # Ala GGC 0 0 + TRNA 54087 - 54162 86.5 # Ala GGC 0 0 + Prom 54276 - 54335 3.2 57 25 Tu 1 . + CDS 54370 - 56559 1475 ## COG2200 FOG: EAL domain + Term 56560 - 56617 16.6 - Term 56551 - 56601 12.7 58 26 Tu 1 . - CDS 56609 - 57811 1631 ## COG1972 Nucleoside permease - Prom 57885 - 57944 5.0 59 27 Tu 1 . + CDS 58147 - 59385 1454 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family + Term 59470 - 59513 3.9 60 28 Tu 1 . - CDS 59526 - 59852 341 ## ECDH10B_2555 hypothetical protein - Prom 59892 - 59951 2.6 - Term 59891 - 59924 1.3 61 29 Tu 1 . - CDS 59967 - 61223 956 ## COG0038 Chloride channel protein EriC - Prom 61398 - 61457 5.0 + Prom 61333 - 61392 2.5 62 30 Tu 1 3/0.615 + CDS 61427 - 62392 1190 ## COG0837 Glucokinase + Term 62406 - 62441 5.1 + Prom 62488 - 62547 3.1 63 31 Op 1 7/0.038 + CDS 62611 - 62937 550 ## COG1445 Phosphotransferase system fructose-specific component IIB 64 31 Op 2 3/0.615 + CDS 62959 - 64206 1531 ## COG1299 Phosphotransferase system, fructose-specific IIC component 65 31 Op 3 3/0.615 + CDS 64221 - 65306 1166 ## COG0006 Xaa-Pro aminopeptidase 66 31 Op 4 3/0.615 + CDS 65306 - 66343 902 ## COG1363 Cellulase M and related proteins 67 31 Op 5 . + CDS 66368 - 68863 2597 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 68 32 Op 1 3/0.615 - CDS 68866 - 69723 616 ## COG2207 AraC-type DNA-binding domain-containing proteins 69 32 Op 2 9/0.000 - CDS 69736 - 70470 780 ## COG3279 Response regulator of the LytR/AlgR family 70 32 Op 3 . - CDS 70485 - 72164 1453 ## COG3275 Putative regulator of cell autolysis - Prom 72344 - 72403 6.5 + Prom 72292 - 72351 4.7 71 33 Tu 1 . + CDS 72559 - 73797 1328 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 73820 - 73851 4.1 - Term 74215 - 74255 4.1 72 34 Tu 1 . - CDS 74289 - 75209 787 ## COG1560 Lauroyl/myristoyl acyltransferase + Prom 75461 - 75520 4.3 73 35 Tu 1 . + CDS 75562 - 75804 281 ## SDY_2575 hypothetical protein + Prom 76340 - 76399 6.3 74 36 Tu 1 . + CDS 76490 - 77122 645 ## SDY_2573 hypothetical protein + Term 77177 - 77225 10.3 + Prom 77550 - 77609 8.4 75 37 Op 1 4/0.346 + CDS 77635 - 78885 1030 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase + Term 78893 - 78921 0.5 76 37 Op 2 3/0.615 + CDS 78939 - 80633 1083 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 77 37 Op 3 2/0.808 + CDS 80703 - 81647 638 ## COG0679 Predicted permeases + Term 81676 - 81712 2.2 78 37 Op 4 . + CDS 81721 - 82866 569 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase + Term 82889 - 82929 4.8 - Term 82877 - 82915 4.4 79 38 Tu 1 . - CDS 82922 - 85861 1090 ## COG0642 Signal transduction histidine kinase - Prom 85931 - 85990 3.4 - Term 86269 - 86309 -0.9 80 39 Tu 1 . - CDS 86520 - 87134 360 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 87248 - 87307 6.9 81 40 Op 1 19/0.000 + CDS 87550 - 88713 618 ## COG1566 Multidrug resistance efflux pump 82 40 Op 2 . + CDS 88713 - 90251 468 ## COG0477 Permeases of the major facilitator superfamily 83 41 Op 1 4/0.346 - CDS 90359 - 91687 1122 ## COG3048 D-serine dehydratase 84 41 Op 2 . - CDS 91705 - 91923 199 ## COG2610 H+/gluconate symporter and related permeases - Prom 92028 - 92087 4.6 + Prom 92007 - 92066 5.5 85 42 Tu 1 . + CDS 92211 - 93161 617 ## COG1609 Transcriptional regulators 86 43 Tu 1 . - CDS 93169 - 94602 667 ## COG1621 Beta-fructosidases (levanase/invertase) - Prom 94642 - 94701 5.6 + Prom 94605 - 94664 3.9 87 44 Op 1 4/0.346 + CDS 94818 - 95732 359 ## COG0524 Sugar kinases, ribokinase family + Term 95752 - 95790 -0.4 88 44 Op 2 21/0.000 + CDS 95804 - 96091 264 ## COG0477 Permeases of the major facilitator superfamily + Prom 96100 - 96159 2.8 89 44 Op 3 . + CDS 96207 - 97052 263 ## COG0477 Permeases of the major facilitator superfamily + Term 97287 - 97338 -0.7 + Prom 97505 - 97564 8.2 90 45 Tu 1 . + CDS 97703 - 98548 201 ## SARI_00213 hypothetical protein + Term 98689 - 98733 -0.9 91 46 Tu 1 . + CDS 98961 - 99362 452 ## COG2916 DNA-binding protein H-NS + Prom 100033 - 100092 1.6 92 47 Tu 1 . + CDS 100179 - 100817 142 ## Acry_0802 hypothetical protein + Prom 101128 - 101187 4.4 93 48 Op 1 . + CDS 101218 - 101637 190 ## ECA2901 hypothetical protein 94 48 Op 2 . + CDS 101708 - 102247 88 ## ECA2902 hypothetical protein + Prom 102464 - 102523 9.2 95 49 Tu 1 . + CDS 102593 - 102751 125 ## gi|300817403|ref|ZP_07097620.1| toxin-antitoxin system, antitoxin component, Xre domain protein + Term 102785 - 102831 11.2 + Prom 103267 - 103326 4.5 96 50 Tu 1 . + CDS 103364 - 103876 77 ## SJA_C1-31970 putative radical SAM + Prom 104070 - 104129 4.5 97 51 Tu 1 . + CDS 104156 - 104485 82 ## SJA_C1-31990 hypothetical protein + Prom 104516 - 104575 4.0 98 52 Tu 1 . + CDS 104610 - 105254 7 ## SJA_C1-32000 hypothetical protein + Term 105311 - 105358 -0.6 99 53 Op 1 . - CDS 105737 - 106345 272 ## COG0693 Putative intracellular protease/amidase 100 53 Op 2 . - CDS 106365 - 106544 67 ## 101 53 Op 3 . - CDS 106611 - 107102 94 ## COG2318 Uncharacterized protein conserved in bacteria - Prom 107122 - 107181 4.8 102 54 Tu 1 . + CDS 107574 - 107813 85 ## Ctu_1p00160 hypothetical protein + Term 107961 - 107994 -0.2 103 55 Tu 1 . - CDS 107849 - 108643 335 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 108663 - 108722 1.9 + Prom 108667 - 108726 2.4 104 56 Tu 1 . + CDS 108753 - 109544 402 ## COG0730 Predicted permeases 105 57 Tu 1 . - CDS 109936 - 110373 346 ## LPC_0165 hypothetical protein + Prom 111201 - 111260 3.3 106 58 Tu 1 . + CDS 111285 - 111491 223 ## COG3311 Predicted transcriptional regulator + Term 111706 - 111748 3.6 107 59 Tu 1 . - CDS 111452 - 111703 222 ## - Prom 111854 - 111913 4.6 + Prom 111791 - 111850 8.9 108 60 Tu 1 . + CDS 111880 - 112191 280 ## gi|300817416|ref|ZP_07097633.1| hypothetical protein HMPREF9345_02477 + Term 112344 - 112387 -0.7 109 61 Op 1 12/0.000 + CDS 113400 - 113651 157 ## COG0582 Integrase 110 61 Op 2 4/0.346 + CDS 113648 - 115189 92 ## COG0582 Integrase 111 61 Op 3 . + CDS 115186 - 117192 651 ## COG4688 Uncharacterized protein conserved in bacteria 112 61 Op 4 . + CDS 117207 - 117605 202 ## Tcr_0331 hypothetical protein + Prom 117642 - 117701 4.3 113 62 Tu 1 . + CDS 117752 - 118177 193 ## SARI_00220 hypothetical protein + Term 118302 - 118351 1.3 - Term 118175 - 118203 1.0 114 63 Tu 1 . - CDS 118229 - 118417 145 ## SARI_00221 hypothetical protein - Prom 118447 - 118506 4.3 115 64 Tu 1 . - CDS 118562 - 118732 222 ## CKO_03957 hypothetical protein - Prom 118907 - 118966 4.8 116 65 Op 1 . - CDS 119486 - 120640 100 ## Dd703_2943 relaxase/mobilization nuclease family protein 117 65 Op 2 . - CDS 120609 - 120860 101 ## CKO_03955 hypothetical protein - Prom 121087 - 121146 5.5 + Prom 121355 - 121414 5.5 118 66 Tu 1 . + CDS 121442 - 121801 150 ## CKO_03954 hypothetical protein + Prom 121808 - 121867 7.3 119 67 Tu 1 . + CDS 121921 - 122097 133 ## CKO_03952 hypothetical protein + Term 122235 - 122291 8.1 + Prom 122667 - 122726 8.9 120 68 Tu 1 . + CDS 122746 - 122925 182 ## - Term 122998 - 123031 5.2 121 69 Tu 1 . - CDS 123041 - 123292 138 ## gi|163756965|ref|ZP_02164072.1| hypothetical protein KAOT1_04625 - Prom 123312 - 123371 5.0 122 70 Tu 1 . - CDS 123422 - 123655 178 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 123 71 Tu 1 . + CDS 124055 - 124327 138 ## KPK_4439 hypothetical protein 124 72 Tu 1 . + CDS 124810 - 125715 337 ## Ent638_2894 radical SAM domain-containing protein + Prom 126131 - 126190 2.5 125 73 Tu 1 . + CDS 126260 - 126820 -6 ## Ent638_2893 radical SAM domain-containing protein 126 74 Tu 1 . - CDS 127071 - 127274 108 ## - Prom 127447 - 127506 4.3 + Prom 127001 - 127060 3.6 127 75 Op 1 . + CDS 127207 - 127452 109 ## Ent638_2892 hypothetical protein 128 75 Op 2 . + CDS 127471 - 129078 305 ## Ent638_2891 hypothetical protein + Term 129230 - 129268 -0.1 129 76 Op 1 4/0.346 - CDS 129578 - 130474 279 ## COG1475 Predicted transcriptional regulators 130 76 Op 2 . - CDS 130471 - 130941 194 ## COG1475 Predicted transcriptional regulators - Prom 131176 - 131235 3.4 131 77 Op 1 . - CDS 131238 - 131366 76 ## B21_02475 hypothetical protein 132 77 Op 2 . - CDS 131356 - 131538 104 ## EcE24377A_2906 resolvase family site-specific recombinase - Prom 131635 - 131694 5.1 - Term 132953 - 133001 -0.6 133 78 Op 1 . - CDS 133210 - 133353 111 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 134 78 Op 2 . - CDS 133367 - 133660 141 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 + Prom 133940 - 133999 9.0 135 79 Op 1 . + CDS 134098 - 134463 72 ## gi|300817440|ref|ZP_07097657.1| conserved domain protein 136 79 Op 2 . + CDS 134533 - 135156 214 ## gi|300817441|ref|ZP_07097658.1| hypothetical protein HMPREF9345_02502 + Term 135217 - 135265 5.2 - Term 135214 - 135245 -0.7 137 80 Tu 1 . - CDS 135260 - 135592 305 ## COG3422 Uncharacterized conserved protein + Prom 136265 - 136324 6.8 138 81 Op 1 . + CDS 136371 - 137729 457 ## COG1106 Predicted ATPases 139 81 Op 2 . + CDS 137732 - 138388 180 ## alr3407 hypothetical protein + Term 138446 - 138486 3.0 140 82 Tu 1 . - CDS 138803 - 139990 385 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 - TRNA 140242 - 140316 64.9 # Arg CCT 0 0 141 83 Tu 1 . - CDS 140392 - 141324 952 ## COG2116 Formate/nitrite family of transporters + Prom 141481 - 141540 4.3 142 84 Tu 1 . + CDS 141618 - 142373 898 ## COG2853 Surface lipoprotein + Term 142378 - 142430 11.0 - Term 142377 - 142408 1.0 143 85 Tu 1 . - CDS 142555 - 143613 390 ## ECIAI1_2422 hypothetical protein - Prom 143643 - 143702 9.9 - Term 143925 - 143957 5.6 144 86 Tu 1 . - CDS 143979 - 145319 1435 ## COG2067 Long-chain fatty acid transport protein - Prom 145420 - 145479 6.4 145 87 Tu 1 . + CDS 145691 - 145975 400 ## COG3691 Uncharacterized protein conserved in bacteria + Term 145993 - 146033 11.1 + Prom 146067 - 146126 5.0 146 88 Op 1 20/0.000 + CDS 146155 - 147465 1383 ## COG0183 Acetyl-CoA acetyltransferase 147 88 Op 2 5/0.231 + CDS 147465 - 149609 1774 ## COG1250 3-hydroxyacyl-CoA dehydrogenase + Prom 149650 - 149709 5.5 148 89 Tu 1 . + CDS 149827 - 150297 419 ## COG2062 Phosphohistidine phosphatase SixA + Term 150309 - 150353 10.1 + Prom 150735 - 150794 8.4 149 90 Op 1 6/0.115 + CDS 150972 - 151535 680 ## COG3539 P pilus assembly protein, pilin FimA + Term 151542 - 151579 7.8 150 90 Op 2 10/0.000 + CDS 151617 - 154259 2510 ## COG3188 P pilus assembly protein, porin PapC 151 90 Op 3 7/0.038 + CDS 154279 - 155031 459 ## COG3121 P pilus assembly protein, chaperone PapD + Term 155083 - 155121 1.3 152 91 Op 1 4/0.346 + CDS 155141 - 155554 187 ## COG3539 P pilus assembly protein, pilin FimA 153 91 Op 2 4/0.346 + CDS 155551 - 156021 221 ## COG3539 P pilus assembly protein, pilin FimA 154 91 Op 3 . + CDS 156018 - 156542 160 ## COG3539 P pilus assembly protein, pilin FimA + Prom 156799 - 156858 4.7 155 92 Tu 1 . + CDS 156904 - 157401 206 ## SF2408 hypothetical protein - Term 157256 - 157296 2.1 156 93 Tu 1 . - CDS 157523 - 158074 580 ## COG2840 Uncharacterized protein conserved in bacteria - Prom 158213 - 158272 3.4 + Prom 158043 - 158102 2.8 157 94 Op 1 3/0.615 + CDS 158240 - 159172 1632 ## PROTEIN SUPPORTED gi|89109150|ref|AP_002930.1| N5-glutamine methyltransferase 158 94 Op 2 7/0.038 + CDS 159207 - 160292 1249 ## COG0082 Chorismate synthase 159 94 Op 3 7/0.038 + CDS 160296 - 161120 544 ## COG3770 Murein endopeptidase 160 94 Op 4 5/0.231 + CDS 161120 - 161929 899 ## COG0730 Predicted permeases 161 94 Op 5 . + CDS 161929 - 162477 570 ## COG3101 Uncharacterized protein conserved in bacteria 162 94 Op 6 . + CDS 162511 - 162789 403 ## ECB_02250 hypothetical protein 163 94 Op 7 . + CDS 162810 - 162974 57 ## SbBS512_E1227 hypothetical protein Predicted protein(s) >gi|299856442|gb|ADWV01000009.1| GENE 1 2 - 854 1090 284 aa, chain - ## HITS:1 COG:ECs3327 KEGG:ns NR:ns ## COG: ECs3327 COG0021 # Protein_GI_number: 15832581 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Escherichia coli O157:H7 # 1 284 1 284 667 595 100.0 1e-170 MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFI LSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLA NAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEGISHEVCSLAGTLGLGKLIGF YDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGHDPQAVKEAILEAQSVKDKPSLI ICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFE >gi|299856442|gb|ADWV01000009.1| GENE 2 874 - 1824 1012 316 aa, chain - ## HITS:1 COG:ECs3326 KEGG:ns NR:ns ## COG: ECs3326 COG0176 # Protein_GI_number: 15832580 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 635 100.0 0 MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGLSQYEHLIDDAIAWGKK NGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSFDKEKSIEKARHLVDLYQQ QGVEKSRILIKLASTWEGIRAAEELEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGR IYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHHYETIVMGASFRRTEQILALTGCDR LTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPMSEAEFRWEHNQDAMAVEKLSEGIRL FAVDQRKLEDLLAAKL >gi|299856442|gb|ADWV01000009.1| GENE 3 2113 - 4392 2673 759 aa, chain + ## HITS:1 COG:maeB_1 KEGG:ns NR:ns ## COG: maeB_1 COG0281 # Protein_GI_number: 16130388 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Escherichia coli K12 # 1 434 1 434 434 849 100.0 0 MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLKAYKY TARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFI EVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNGLRV VEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQGREPNMAETKAAY AVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKKMARAPMILALANPEPEILPPLAKE VRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDVGATAINEEMKLAAVRAIAELAHAEQS EVVASAYGDQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMESGVATRPIADFDVYIDKL TEFVYKTNLFMKPIFSQARKAPKRVVLPEGEEARVLHATQELVTLGLAKPILIGRPNVIE MRIQKLGLQIKAGVDFEIVNNESDPRFKEYWTEYFQIMKRRGVTQEQAQRALISNPTVIG AIMVQRGEADAMICGTVGDYHEHFSVVKNVFGYRDGVHTAGAMNALLLLSGNTFIADTYV NDEPDAEELAEITLMAAETVRRFGIEPRVALLSHSNFGSSDCPSSSKMRQALELVRDRAP DLMIDGEMHGDAALVEAIRNDRMPDSPLKGSANILVMPNMEAARISYNLLRVSSSEGVTV GPVLMGVAKPVHVLTPIASVRRIVNMVALAVVEAQTQPL >gi|299856442|gb|ADWV01000009.1| GENE 4 4685 - 5020 432 111 aa, chain + ## HITS:1 COG:ECs3324 KEGG:ns NR:ns ## COG: ECs3324 COG4810 # Protein_GI_number: 15832578 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli O157:H7 # 1 111 25 135 135 213 100.0 1e-55 MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLAL KAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLNYTLCEMTKS >gi|299856442|gb|ADWV01000009.1| GENE 5 5033 - 5512 365 159 aa, chain + ## HITS:1 COG:ECs3323 KEGG:ns NR:ns ## COG: ECs3323 COG4917 # Protein_GI_number: 15832577 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli O157:H7 # 1 159 1 159 159 315 99.0 2e-86 MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDTPGEYFSHPRWYHALIT TLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTDMPDADVAATRKLLLETGF EEPIFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE >gi|299856442|gb|ADWV01000009.1| GENE 6 5487 - 6188 752 233 aa, chain + ## HITS:1 COG:eutQ KEGG:ns NR:ns ## COG: eutQ COG4766 # Protein_GI_number: 16130385 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli K12 # 1 233 1 233 233 454 99.0 1e-128 MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFTITECDESIPVTASVPA SVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQSLEQGAMQPSFKSVTGKG GIKVIDGSSVKFGRFDGAEPHCVGLTDLVTGDDGSSMAAGFMQWENAFFPWTLNYDEIDM VLEGELHVRHEGETMIAKAGDVMFIPKGSSIEFGTTSSVKFLYVAWPANWQSL >gi|299856442|gb|ADWV01000009.1| GENE 7 6185 - 6988 909 267 aa, chain + ## HITS:1 COG:eutT KEGG:ns NR:ns ## COG: eutT COG4812 # Protein_GI_number: 16130384 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization cobalamin adenosyltransferase # Organism: Escherichia coli K12 # 1 267 1 267 267 508 100.0 1e-144 MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLRIKFIDEQGRLFVDDEQ QQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKMVAKSDPRLGFRAVLDSTI ALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGCQAIVGLSDEDLHRLSHQPLR YLDHDHLVPEASHGRDAALLNLLRTKVRETETVAAQVFITRSFEVLRPDILQALNRLSST VYVMMILSVTKQPLTVKQIQQRLGETQ >gi|299856442|gb|ADWV01000009.1| GENE 8 6985 - 8001 843 338 aa, chain + ## HITS:1 COG:eutI KEGG:ns NR:ns ## COG: eutI COG0280 # Protein_GI_number: 16130383 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Escherichia coli K12 # 1 338 1 338 338 624 100.0 1e-179 MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPILVANPFELRQFALSHGV AMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTDPLMFAAAMVSAGKADVCI AGNLSSTANVLRAGLRIIGLQPGCKTLSSIFLMLPQYSGPALGFADCSVVPQPTAAQLAD IALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANVQQATEIVRERAPKLVVDGELQF DAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGGYRAVGPLIQGLAAPM HDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQTLVE >gi|299856442|gb|ADWV01000009.1| GENE 9 8040 - 8333 489 97 aa, chain + ## HITS:1 COG:ECs3319 KEGG:ns NR:ns ## COG: ECs3319 COG4577 # Protein_GI_number: 15832573 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Escherichia coli O157:H7 # 1 97 15 111 111 153 100.0 9e-38 MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGA AAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL >gi|299856442|gb|ADWV01000009.1| GENE 10 8440 - 8727 264 95 aa, chain + ## HITS:1 COG:cchB KEGG:ns NR:ns ## COG: cchB COG4576 # Protein_GI_number: 16130381 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Escherichia coli K12 # 1 95 1 95 95 174 98.0 3e-44 MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAIDNIGAGTGEWVLLVSG SSARQAHKSETSPVDLCVIGIVDEVVSSGQVIFHK >gi|299856442|gb|ADWV01000009.1| GENE 11 8739 - 10142 837 467 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 1 454 1 461 477 327 40 3e-88 MNQQDIEQVVKAVLLKMQSSDTPPAAVHEMGVFASLDDAVAAAKVAQQGLKSVAMRQLAI AAIREAGEKHARDLAELAVSETGMGRVEDKFAKNVAQARGTPGVECLSPQVLTGDNGLTL IENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVIFAPHPAAKKVSQRAITLLNQAIV AAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGEAVVEAARKHTNKRLIAAGAGNP PVVVDETADLARAAQSIVKGASFDNNIICADEKVLIVVDSVADELMRLMEGQHAVKLTAE QAQQLQPVLLKNIDERGKGTVSRDWVGRDAAKIAAAIGLNVPQETRLLFVETTAEHPFAV TELMMPVLPVVRVANVADAIALAVKLEGGCHHTAAMHSRNIENMNQMANAIDTSIFVKNG PCIAGLGLGGEGWTTMTITTPTGEGVTSARTFVRLRRCVLVDAFRIV >gi|299856442|gb|ADWV01000009.1| GENE 12 10153 - 10989 908 278 aa, chain + ## HITS:1 COG:eutJ KEGG:ns NR:ns ## COG: eutJ COG4820 # Protein_GI_number: 16130379 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin # Organism: Escherichia coli K12 # 1 278 1 278 278 562 99.0 1e-160 MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSMVVDRDGQPVAVCLDWA DVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPPGTDPRISINVLESAGLEV SHVLDEPTAVADLLQLDNAGVVDIGGGTTGIAIVKKGKVTYSADEATGGHHISLTLAGNR RISLEEAEQYKRGHGDEIWPAVKPVYEKMADIVARHIEGQGITDLWLAGGSCMQPGVAEL FRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLYAK >gi|299856442|gb|ADWV01000009.1| GENE 13 10979 - 12166 1128 395 aa, chain + ## HITS:1 COG:ECs3315 KEGG:ns NR:ns ## COG: ECs3315 COG1454 # Protein_GI_number: 15832569 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 395 10 404 404 718 99.0 0 MQNELQTALFQAFDTLNLQRVKTFSVPPVTLCGPGSVSSCGQQAQTRGLKHLFVMADSFL HQAGMTAGLTRSLAVKGIAMTLWPCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLD AAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAIPTTAGTGSETTNVTVIIDAVSGRKQV LAHASLMPDVAILDAALTEGVPSHVTAMTGIDALTHAIEAYSALNATPFTDSLAIGAIAM IGKSLPKAVGYGHDLAARESMLLASCMAGMAFSSAGLGLCHAMAHQPGAALHIPHGLANA MLLPTVMEFNRMVCRERFSQIGRALRTKKSDDHDAINAVSELIAEVGIGKRLGDVGATSA HYGAWAQAAQEDICLRSNPRTASLEQIVGLYAAAQ >gi|299856442|gb|ADWV01000009.1| GENE 14 12283 - 13509 1675 408 aa, chain + ## HITS:1 COG:eutH KEGG:ns NR:ns ## COG: eutH COG3192 # Protein_GI_number: 16130377 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli K12 # 1 408 1 408 408 663 100.0 0 MGINEIIMYIMMFFMLIAAVDRILSQFGGSARFLGKFGKSIEGSGGQFEEGFMAMGALGL AMVGMTALAPVLAHVLGPVIIPVYEMLGANPSMFAGTLLACDMGGFFLAKELAGGDVAAW LYSGLILGSMMGPTIVFSIPVALGIIEPSDRRYLALGVLAGIVTIPIGCIAGGLVAMYSG VQINGQPVEFTFALILMNMIPVIIVAILVALGLKFIPEKMINGFQIFAKFLVALITLGLA AAVVKFLLGWELIPGLDPIFMAPGDKPGEVMRAIEVIGSISCVLLGAYPMVLLLTRWFEK PLMSVGKVLNMNNIAAAGMVATLANNIPMFGMMKQMDTRGKVINCAFAVSAAFALGDHLG FAAANMNAMIFPMIVGKLIGGVTAIGVAMMLVPKEDATATKTEAEAQS >gi|299856442|gb|ADWV01000009.1| GENE 15 13506 - 14909 1476 467 aa, chain + ## HITS:1 COG:ECs3313 KEGG:ns NR:ns ## COG: ECs3313 COG4819 # Protein_GI_number: 15832567 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition # Organism: Escherichia coli O157:H7 # 1 467 1 467 467 888 99.0 0 MNTRQLLSVGIDIGTTTTQVIFSHLELVNRAAVSQVPRYEFIKREISWQSPVFFTPVDKQ GGLKEAELKTLILEQYQAAGIAPESVDSGAIIITGESAKTRNARPAVMALSQSLGDFVVA SAGPHLESVIAGHGAGAQTLSEQRLCRVLNIDIGGGTANYALFDAGKISGTACLNVGGRL LETDSQGRVVYAHKPGQMIVDECFGAGTDARSLTGAQLVQVTRRMAELIVEVIDGTLSPL AQALMQTGLLPAGVTPEIITLSGGVGECYRHQPADPFCFADIGPLLATTLHDHPRLREMN VQFPAQTVRATVIGAGAHTLSLSGSTIWLEGVQLPLRNLPVAIPIDETDLVSAWQQALIQ LDLDPKTDAYVLALPASLPVRYAAVLTVINALVDFVARFPNPHPLLVVAGQDFGKALGML LRPQLQQLPLAVIDEVIVRAGDYIDIGTPLFGGSVVPVTVKSLAFPS >gi|299856442|gb|ADWV01000009.1| GENE 16 14921 - 16282 1579 453 aa, chain + ## HITS:1 COG:eutB KEGG:ns NR:ns ## COG: eutB COG4303 # Protein_GI_number: 16130366 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, large subunit # Organism: Escherichia coli K12 # 1 453 15 467 467 924 100.0 0 MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAASSQERVAAKQVLSEMTVADIR NNPVIAYEDDCVTRLIQDDVNETAYNQIKNWSISELREYVLSDETSVDDIAFTRKGLTSE VVAAVAKICSNADLIYGAKKMPVIKKANTTIGIPGTFSARLQPNDTRDDVQSIAAQIYEG LSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHVTTQIEAIRRGAP GGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFNRIAGENCLYFETGQGSALSAGANF GADQVTMEARNYGLARHYDPFIVNTVVGFIGPEYLYNDRQIIRAGLEDHFMGKLSGISMG CDCCYTNHADADQNLNENLMILLATAGCNYIMGMPLGDDIMLNYQTTAFHDTATVRQLLN LRPSPEFERWLESMGIMANGRLTKRAGDPSLFF >gi|299856442|gb|ADWV01000009.1| GENE 17 16303 - 17190 1088 295 aa, chain + ## HITS:1 COG:eutC KEGG:ns NR:ns ## COG: eutC COG4302 # Protein_GI_number: 16130365 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, small subunit # Organism: Escherichia coli K12 # 1 295 1 295 295 554 99.0 1e-158 MDQKQIEEIVRSVMASMGQTAPAPSEAKCATTNCAAPVTSESCALDLGSAEAKAWIGVEN PHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKAQGL LEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEE ILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSC YAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINMTR >gi|299856442|gb|ADWV01000009.1| GENE 18 17200 - 17859 748 219 aa, chain + ## HITS:1 COG:ECs3310 KEGG:ns NR:ns ## COG: ECs3310 COG4816 # Protein_GI_number: 15832564 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 374 98.0 1e-104 MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMVAHIENGAAFQWANDAE NTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLVTYVPPP SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA >gi|299856442|gb|ADWV01000009.1| GENE 19 17872 - 18372 465 166 aa, chain + ## HITS:1 COG:eutK KEGG:ns NR:ns ## COG: eutK COG4577 # Protein_GI_number: 16130363 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Escherichia coli K12 # 1 166 3 168 168 288 100.0 3e-78 MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAACRAALDAG CAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPDAPVIVAESADELLALLTS VRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSRYRLKPH >gi|299856442|gb|ADWV01000009.1| GENE 20 18418 - 19470 931 350 aa, chain + ## HITS:1 COG:ECs3308 KEGG:ns NR:ns ## COG: ECs3308 COG2207 # Protein_GI_number: 15832562 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 350 1 350 350 711 99.0 0 MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPG KFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEI ATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRSQSALEVKEQHKA ALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEDAQPMVTAESISHQSYRR LLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE LISPWSQSTTVKDAAMQWGFWHLGQFATDYQQLFAEKPSLTLHQRMREWG >gi|299856442|gb|ADWV01000009.1| GENE 21 19476 - 20375 730 299 aa, chain - ## HITS:1 COG:hemF KEGG:ns NR:ns ## COG: hemF COG0408 # Protein_GI_number: 16130361 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase # Organism: Escherichia coli K12 # 1 299 1 299 299 620 98.0 1e-178 MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGGRSRVLRNGGVFEQAGV NFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYVPTSHANVRFFIAEKPGAE PVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDDYFYLKHRNEQR GIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRGRY VEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDYQPKDGSPEAALSEFIKVRDWV >gi|299856442|gb|ADWV01000009.1| GENE 22 20379 - 21248 845 289 aa, chain - ## HITS:1 COG:ECs3306 KEGG:ns NR:ns ## COG: ECs3306 COG0860 # Protein_GI_number: 15832560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 532 100.0 1e-151 MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDEPLKTSNGHSKPKAKKSGGKRVVV LDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARLTRSGDTFIPLYDRVEI AHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMAKYLSERENRADEVAGKKATD KDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVVLKSPSVPSVL VETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQKAHSKKR >gi|299856442|gb|ADWV01000009.1| GENE 23 21462 - 21887 570 141 aa, chain + ## HITS:1 COG:ECs3305 KEGG:ns NR:ns ## COG: ECs3305 COG0456 # Protein_GI_number: 15832559 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Escherichia coli O157:H7 # 1 141 38 178 178 293 100.0 7e-80 MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMG GYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYER LGYEHADVLSLGKRLIEDEEY >gi|299856442|gb|ADWV01000009.1| GENE 24 21874 - 22323 297 149 aa, chain + ## HITS:1 COG:no KEGG:G2583_2964 NR:ns ## KEGG: G2583_2964 # Name: yfeZ # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 149 3 151 151 239 100.0 3e-62 MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDN FWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIG LALVVADIVALIWLLTNRRLRACFNEVKE >gi|299856442|gb|ADWV01000009.1| GENE 25 22384 - 22959 484 191 aa, chain + ## HITS:1 COG:no KEGG:SDY_2630 NR:ns ## KEGG: SDY_2630 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 191 1 191 191 378 100.0 1e-104 MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAI ADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGV KIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISYQFSGEWSGPEGLMPSDDTLK NWKVSKIIWRR >gi|299856442|gb|ADWV01000009.1| GENE 26 23055 - 23954 1146 299 aa, chain + ## HITS:1 COG:yfeX KEGG:ns NR:ns ## COG: yfeX COG2837 # Protein_GI_number: 16130356 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Escherichia coli K12 # 1 299 10 308 308 615 99.0 1e-176 MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFG NNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDC IEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNL KQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTA SGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL >gi|299856442|gb|ADWV01000009.1| GENE 27 24012 - 25316 1242 434 aa, chain - ## HITS:1 COG:yfeW KEGG:ns NR:ns ## COG: yfeW COG1680 # Protein_GI_number: 16130355 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli K12 # 1 434 30 463 463 872 99.0 0 MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDAGYPGVNL LIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEG KLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYSQD KGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHT VFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGL FSNTGDIAVLMQTMLNGGGYGDVQLFSAETVKMFTTSSKEDATFGLGWRVNGNATMTPTF GTLASPQTYGHTGWTGTVTVIDPVNHMAIVMLSNKPHSPVADPQKNPNMFESGQLPIATY GWVVDQVYAALKQK >gi|299856442|gb|ADWV01000009.1| GENE 28 25321 - 26745 1593 474 aa, chain - ## HITS:1 COG:yfeV_2 KEGG:ns NR:ns ## COG: yfeV_2 COG1263 # Protein_GI_number: 16130354 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 101 474 1 374 374 654 99.0 0 MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVDPNIKTLEGVKGVILTS DQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQLKAKQTSGVQQFLAKFATI FTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALNFMKVFSKGLFTFLVILVGYN AAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDFFGLPIDPRGNIIGVLIAAWACA RIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIMPLGGWLFEGMSWLFMHLNSNPFGC AVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNSLFPILSMAGAGQVGAALALYWRAQPH SALRSQVRGAIIPGLLGVGEPLIYGVTLPRMKPFITACLGGAAGGLFIGLIAWWGLPMGL NSAFGPSGLVALPLMTSAQGILPAMAVYAGGILVAWVCGFIFTTLFGCRNVNLD >gi|299856442|gb|ADWV01000009.1| GENE 29 26749 - 27645 932 298 aa, chain - ## HITS:1 COG:yfeU KEGG:ns NR:ns ## COG: yfeU COG2103 # Protein_GI_number: 16130353 # Func_class: R General function prediction only # Function: Predicted sugar phosphate isomerase # Organism: Escherichia coli K12 # 1 298 1 298 298 542 99.0 1e-154 MQLEKMITEGSNTASAEIDRVSTLEMCRIINDEDKTVPLAVERVLPDIAAAIDVIHAQVS GGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGGEYAIQHAVEGAEDSREGG VNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCRTVGISCNPGSAVSTTAEFAI TPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGKVFGNLMVDVVATNEKLHVRQVN IVKNATGCNAEQAEAALIACERNCKTAIVMVLKNLDAAEAKKRLDQHGGFIRQVLDKE >gi|299856442|gb|ADWV01000009.1| GENE 30 27809 - 28666 782 285 aa, chain + ## HITS:1 COG:yfeT KEGG:ns NR:ns ## COG: yfeT COG1737 # Protein_GI_number: 16130352 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 285 1 285 285 474 98.0 1e-134 MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGA QGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCSLF DYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQAL KKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTLDTVSGETEW RSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK >gi|299856442|gb|ADWV01000009.1| GENE 31 28795 - 29586 248 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 251 4 238 242 100 30 6e-20 MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVV ADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNV TKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRV NAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESS YLTGTQNVIDGGSTLPETVSVGI >gi|299856442|gb|ADWV01000009.1| GENE 32 29757 - 30773 1397 338 aa, chain + ## HITS:1 COG:ECs3296 KEGG:ns NR:ns ## COG: ECs3296 COG4150 # Protein_GI_number: 15832550 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 338 1 338 338 649 99.0 0 MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKL TIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYS TMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKAKT EQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKT NILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKNKF PQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRN >gi|299856442|gb|ADWV01000009.1| GENE 33 30773 - 31606 946 277 aa, chain + ## HITS:1 COG:cysU KEGG:ns NR:ns ## COG: cysU COG0555 # Protein_GI_number: 16130349 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type sulfate transport system, permease component # Organism: Escherichia coli K12 # 1 277 1 277 277 439 100.0 1e-123 MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWEVITNPQVVAAY KVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFS VNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGAT RWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEF DYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH >gi|299856442|gb|ADWV01000009.1| GENE 34 31606 - 32481 1092 291 aa, chain + ## HITS:1 COG:cysWm KEGG:ns NR:ns ## COG: cysWm COG4208 # Protein_GI_number: 16132224 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, permease component # Organism: Escherichia coli K12 # 1 291 1 291 291 538 100.0 1e-153 MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQAFSKGLMPVLQNLADP DMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLV YLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAA ILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE LLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKRAQQEEHHEH >gi|299856442|gb|ADWV01000009.1| GENE 35 32471 - 33568 1478 365 aa, chain + ## HITS:1 COG:cysA KEGG:ns NR:ns ## COG: cysA COG1118 # Protein_GI_number: 16130348 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Escherichia coli K12 # 1 365 1 365 365 719 99.0 0 MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIR FHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKL LEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLR QLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPEQVWREPATRFVLEFMGEV NRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLRPWEVDISRRTSLDSPLPVQVLEAS PKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGERLFVGLQHARLYNGDERIETRDEELA LAQSA >gi|299856442|gb|ADWV01000009.1| GENE 36 33624 - 34613 562 329 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 24 318 1 304 308 221 39 2e-56 MARFVTCRPDKTRKRRIRQHHVWIEIVSTLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGN NPAGSVKDRAALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDN MSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTT GPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPA EYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPGAV VVAIICDRGDRYLSTGVFGEEHFSQGAGI >gi|299856442|gb|ADWV01000009.1| GENE 37 34616 - 34984 405 122 aa, chain - ## HITS:1 COG:no KEGG:ECO103_2938 NR:ns ## KEGG: ECO103_2938 # Name: yfeK # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 122 1 122 122 234 100.0 5e-61 MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLAQKKDLIFVRNGDEHTCDEAVSHL RLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDENAQPFLHALIAQTDKTVP AQ >gi|299856442|gb|ADWV01000009.1| GENE 38 35089 - 35940 850 283 aa, chain + ## HITS:1 COG:ECs3290 KEGG:ns NR:ns ## COG: ECs3290 COG2240 # Protein_GI_number: 15832544 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Escherichia coli O157:H7 # 1 283 1 283 283 553 99.0 1e-157 MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHY DTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDL LIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAA AKSLLSDTLKWVVITSASGNEENQEMQVVVVSADSVNVISHSRVKTDLKGTGDLFCAQLI SGLLKGKALNDAVHRAGLRVLEVMRYTQQHESDELILPPLAEA >gi|299856442|gb|ADWV01000009.1| GENE 39 35982 - 36491 691 169 aa, chain - ## HITS:1 COG:crr KEGG:ns NR:ns ## COG: crr COG2190 # Protein_GI_number: 16130343 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Escherichia coli K12 # 1 169 1 169 169 285 100.0 4e-77 MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKM VAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTV IEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGETPVIRIKK >gi|299856442|gb|ADWV01000009.1| GENE 40 36532 - 38259 1832 575 aa, chain - ## HITS:1 COG:ECs3288 KEGG:ns NR:ns ## COG: ECs3288 COG1080 # Protein_GI_number: 15832542 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli O157:H7 # 1 575 1 575 575 1043 100.0 0 MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFLSGRAKASAQLETIKTK AGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAAHEVIEGQASALEELDD EYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVAADLTPSETAQLNLKKVLGFI TDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYLILDAVNNQVYVNPTNEVIDKMR AVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFL FMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTMDIGGDKELPYMNFPKEENPFLGWRAI RIAMDRKEILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAF DESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPS VLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIKKIIRNT NFEDAKVLAEQALAQPTTDELMTLVNKFIEEKTIC >gi|299856442|gb|ADWV01000009.1| GENE 41 38304 - 38561 377 85 aa, chain - ## HITS:1 COG:ECs3287 KEGG:ns NR:ns ## COG: ECs3287 COG1925 # Protein_GI_number: 15832541 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 85 1 85 85 129 100.0 2e-30 MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTV VTISAEGEDEQKAVEHLVKLMAELE >gi|299856442|gb|ADWV01000009.1| GENE 42 38945 - 39916 702 323 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 312 3 304 308 275 49 1e-72 MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK PGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGM KGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGG TLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPANLD LKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILP SSGERYLSTALFADLFTEKELQQ >gi|299856442|gb|ADWV01000009.1| GENE 43 40101 - 40736 544 211 aa, chain - ## HITS:1 COG:ECs3285 KEGG:ns NR:ns ## COG: ECs3285 COG2981 # Protein_GI_number: 15832539 # Func_class: E Amino acid transport and metabolism # Function: Uncharacterized protein involved in cysteine biosynthesis # Organism: Escherichia coli O157:H7 # 1 211 43 253 253 382 99.0 1e-106 MGGAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAP FNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYLIPGI GQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSLFTMI PLLNLFIMPVAVCGATAMWVDCYRDKHAMWR >gi|299856442|gb|ADWV01000009.1| GENE 44 41095 - 42078 767 327 aa, chain + ## HITS:1 COG:ZzipA KEGG:ns NR:ns ## COG: ZzipA COG3115 # Protein_GI_number: 15802945 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli O157:H7 EDL933 # 1 327 2 328 328 474 99.0 1e-133 MQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRMKSKRDDDSYDEDVEDDE GVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPRQPVQQPPEAQVPPQHAPRP AQPVQQPAYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPAQQAFQPAEPVAAPQPEPVAEP APVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQAGFIFGDMNIYHRHLSPDGSGPA LFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYGDELQNFKLMLQSAQHIADEVGGVVL DDQRRMMTPQKLREYQDIIREVKDANA >gi|299856442|gb|ADWV01000009.1| GENE 45 42149 - 44164 2212 671 aa, chain + ## HITS:1 COG:lig KEGG:ns NR:ns ## COG: lig COG0272 # Protein_GI_number: 16130337 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Escherichia coli K12 # 1 671 1 671 671 1314 99.0 0 MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNNEKVTWCCELKLDGLA VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL GRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLEQQEQL GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI DEAEMLRLLGS >gi|299856442|gb|ADWV01000009.1| GENE 46 44166 - 44384 271 72 aa, chain + ## HITS:1 COG:Z3676 KEGG:ns NR:ns ## COG: Z3676 COG3530 # Protein_GI_number: 15802943 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 72 1 72 72 123 100.0 9e-29 MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAGKLGELMQITLLIKTEG LTQLVQPLKRPL >gi|299856442|gb|ADWV01000009.1| GENE 47 44381 - 45379 755 332 aa, chain - ## HITS:1 COG:ECs3282 KEGG:ns NR:ns ## COG: ECs3282 COG0385 # Protein_GI_number: 15832536 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Escherichia coli O157:H7 # 1 332 1 332 332 592 99.0 1e-169 MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIALLFFMHGAKLSREAIIA GGGHWRLHLWVICSTFVLFPILGVLFAWWKPVNVDPMLYSGFLYLCILPATVQSAIAFTS MAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGSLEQVGKIMLQLLLPFVLGHL SRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVNGIWHKVGWGSLLFIVVVSCVLL AIVIVVNVFMARRLGFNKADEITIVFCGSKKSLANGIPMANILFPTSVIGMMVLPLMIFH QIQLMVCAVLARRYKRQTEQLQAQQESSADKA >gi|299856442|gb|ADWV01000009.1| GENE 48 45469 - 46395 611 308 aa, chain + ## HITS:1 COG:yfeR KEGG:ns NR:ns ## COG: yfeR COG0583 # Protein_GI_number: 16130335 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 308 1 308 308 575 100.0 1e-164 MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLT DAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYP DIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVE DYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGIS ILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR EGDPLYQI >gi|299856442|gb|ADWV01000009.1| GENE 49 46434 - 47198 787 254 aa, chain - ## HITS:1 COG:no KEGG:ECS88_2597 NR:ns ## KEGG: ECS88_2597 # Name: yfeN # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 254 1 254 254 442 96.0 1e-123 MKKHLLTLTLSSILAIPVVSHAEFKGGFADIGVHYLDWTSRTTEKSSTKSHKDDFGYLEF EGGANFSWGEMYGFFDWENFYNGRHNKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYG SANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTYYTGDNGYVAGWVAGYNFMLG SEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGED FYQDAIIYSIKFNF >gi|299856442|gb|ADWV01000009.1| GENE 50 47447 - 48280 952 277 aa, chain + ## HITS:1 COG:xapA KEGG:ns NR:ns ## COG: xapA COG0005 # Protein_GI_number: 16130333 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Escherichia coli K12 # 1 277 1 277 277 563 100.0 1e-160 MSQVQFSHNPLFCIDIIKTYKPDFTPRVAFILGSGLGALADQIENAVAISYEKLPGFPVS TVHGHAGELVLGHLQGVPVVCMKGRGHFYEGRGMTIMTDAIRTFKLLGCELLFCTNAAGS LRPEVGAGSLVALKDHINTMPGTPMVGLNDDRFGERFFSLANAYDAEYRALLQKVAKEEG FPLTEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVVPEVISARHCDLKVVAVSAITNM AEGLSDVKLSHAQTLAAAELSKQNFINLICGFLRKIA >gi|299856442|gb|ADWV01000009.1| GENE 51 48340 - 49596 899 418 aa, chain + ## HITS:1 COG:xapB KEGG:ns NR:ns ## COG: xapB COG0477 # Protein_GI_number: 16130332 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 418 1 418 418 702 99.0 0 MSIAMRLKVMSFLQYFIWGSWLVTVGSYMINTLHFTGANVGMVYSSKGIAAIIMPGIMGI IADKWLRAERAYMLCHLVCAGVLFYAASVTDPDMMFWVMLVNAMAFMPTIALSNSVSYSC LAQAGLDPVTAFPPIRVFGTVGFIVAMWAVSLLHLELSSLQLYIASGASLLLSAYALTLP KIPVAEKKATTSLASKLGLDAFVLFKNPRMAIFFLFAMMLGAVLQITNVFGNPFLHDFAR NPEFADSFVVKYPSILLSVSQMAEVGFILTIPFFLKRFGIKTVMLMSMVAWTLRFGFFAY GDPSTTGFILLLLSMIVYGCAFDFFNISGSVFVEQEVDSSIRASAQGLFMTMVNGVGAWV GSILSGMAVDYFSVDGVKDWQTIWLVFAGYALFLAVIFFFGFKYNHDPEKIKHRAVAH >gi|299856442|gb|ADWV01000009.1| GENE 52 49649 - 49807 116 52 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_2559 NR:ns ## KEGG: EcSMS35_2559 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 52 1 52 52 69 100.0 3e-11 MKDILFSSGVGFGIGALFTIVRLPIPVPNVLPGILSIVFMYVGYLVVKYFMP >gi|299856442|gb|ADWV01000009.1| GENE 53 49848 - 50732 447 294 aa, chain + ## HITS:1 COG:xapR KEGG:ns NR:ns ## COG: xapR COG0583 # Protein_GI_number: 16130331 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 294 1 294 294 561 99.0 1e-160 MERVYRTDLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKELENQLGTQLFIRHSRS VVLTHAGKILMEESRRLLVNANNVLARVEQIGRGEAGRIELGVVGTAMWGRMRPVMRRFL RENPNVEVLFREKMPAMQMALLERRELDAGIWRMATEPPTGFTSLRLHESAFLVAMPEEH HLSSFSTVPLEALRDEYFVTMPPVYTDWDFLQRVCQQVGFSPVVIREVNEPQTVLAMVSM GIGITLIADSYAQMNWPGVIFRPLKQRIPADLYIVYETQQVTPAMVKLLAALTQ >gi|299856442|gb|ADWV01000009.1| GENE 54 51531 - 52946 1743 471 aa, chain + ## HITS:1 COG:gltX KEGG:ns NR:ns ## COG: gltX COG0008 # Protein_GI_number: 16130330 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 471 1 471 471 983 100.0 0 MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDTDLERSTPEAIEAIMDG MNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSKERLEALREEQMAKGEKPR YDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPIEFSNQELDDLIIRRTDGSPT YNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALKAPVPVYAHVSMINGDDGKKLSK RHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFTREEMIKYFTLNAVSKSASAFNT DKLLWLNHHYINALPPEYVATHLQWHIEQENIDTRNGPQLADLVKLLGERCKTLKEMAQS CRYFYEDFAEFDADAAKKHLRPVARQPLEVVRDKLAAITDWTAENVHHAIQATADELEVG MGKVGMPLRVAVTGAGQSPALDVTVHAIGKTRSIERINKALDFIAERENQQ >gi|299856442|gb|ADWV01000009.1| GENE 55 52998 - 53390 213 130 aa, chain - ## HITS:1 COG:no KEGG:JW2394 NR:ns ## KEGG: JW2394 # Name: yfeD # Def: predicted DNA-binding transcriptional regulator # Organism: E.coli_J # Pathway: not_defined # 1 130 1 130 130 250 100.0 1e-65 MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQ NTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNF LARLDIDESA >gi|299856442|gb|ADWV01000009.1| GENE 56 53392 - 53751 345 119 aa, chain - ## HITS:1 COG:no KEGG:SDY_2596 NR:ns ## KEGG: SDY_2596 # Name: yfeC # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 119 1 119 119 216 100.0 2e-55 MFKERMTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNA ERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK >gi|299856442|gb|ADWV01000009.1| GENE 57 54370 - 56559 1475 729 aa, chain + ## HITS:1 COG:yfeA_3 KEGG:ns NR:ns ## COG: yfeA_3 COG2200 # Protein_GI_number: 16130327 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 472 729 1 258 258 524 100.0 1e-148 MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFG WRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRY VWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYN MLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIA GYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLIS FSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNL EFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNI LNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEM VSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLP LIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRY HISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADII KIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYL IGRPQPLAD >gi|299856442|gb|ADWV01000009.1| GENE 58 56609 - 57811 1631 400 aa, chain - ## HITS:1 COG:nupC KEGG:ns NR:ns ## COG: nupC COG1972 # Protein_GI_number: 16130325 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Escherichia coli K12 # 1 400 1 400 400 653 100.0 0 MDRVLHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLAWFFLNSDVGLGFVKGF SEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFISALIGILQHIRVLPVIIRA IGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGKISRNRMYTMAATAMSTVSMS IVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVDASEENIQMSNLHEGQSFFEMLG EYILAGFKVAIIVAAMLIGFIALIAALNALFATVTGWFGYSISFQGILGYIFYPIAWVMG VPSSEALQVGSIMATKLVSNEFVAMMDLQKIASTLSPRAEGIISVFLVSFANFSSIGIIA GAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLSASIAALVL >gi|299856442|gb|ADWV01000009.1| GENE 59 58147 - 59385 1454 412 aa, chain + ## HITS:1 COG:ECs3271 KEGG:ns NR:ns ## COG: ECs3271 COG1914 # Protein_GI_number: 15832525 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Escherichia coli O157:H7 # 1 412 1 412 412 697 100.0 0 MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWAN LMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGF KLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGLLLFVAAAYIVELIFSQPNLA QLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSSLTQHLHGGSRQQRYSATKWDVA IAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATVFGLSLVAAGL SSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLPSFIVILMGLDPTRILVMSQVLLSFGI ALALVPLLIFTSDSKLMGDLVNSKRVKQTGWVIVVLVVALNIWLLVGTALGL >gi|299856442|gb|ADWV01000009.1| GENE 60 59526 - 59852 341 108 aa, chain - ## HITS:1 COG:no KEGG:ECDH10B_2555 NR:ns ## KEGG: ECDH10B_2555 # Name: ypeC # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 108 1 108 108 165 100.0 6e-40 MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYE WRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGRGHGHRH >gi|299856442|gb|ADWV01000009.1| GENE 61 59967 - 61223 956 418 aa, chain - ## HITS:1 COG:ECs3269 KEGG:ns NR:ns ## COG: ECs3269 COG0038 # Protein_GI_number: 15832523 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Escherichia coli O157:H7 # 1 418 1 418 418 635 99.0 0 MLHPRARTMLLLSLPAVAIGIASSLILIVVMKIASALQNLLWQRLPGTLGIAQDSPLWII GVLTLTGIAVGLVIRFSQGHAGPDPACEPLIGAPVPPSALPGLIVALILGLAGGVSLGPE HPIMTVNIALAVAIGARLLPRVNRMEWTILASAGTIGALFGTPVAAALIFSQTLNGSSEV PLWDRLFAPLMAAAAGALTTGLFFHPHFSLPIAHYGQMEMTDILSGAIVAAIAIAAGMVA VWCLPRLHAMMNQMKNPVLVLGIGGFILGILGVIGGPVSLFKGLDEMQQMVANQAFSTSD YFLLAVIKLAALVVAAASGFRGGRIFPAVFVGVALGLMLHEHVPAVPAAITVSCAILGIV LVVTRDGWLSLFMAAVVVPNTTLLPLLCIVMLPAWLLLAGKPMMMVNRPKQQPPHDNV >gi|299856442|gb|ADWV01000009.1| GENE 62 61427 - 62392 1190 321 aa, chain + ## HITS:1 COG:ECs3268 KEGG:ns NR:ns ## COG: ECs3268 COG0837 # Protein_GI_number: 15832522 # Func_class: G Carbohydrate transport and metabolism # Function: Glucokinase # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 659 100.0 0 MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGC IAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFG GAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAE IGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDCRRALSLFCVI MGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIV HDNPGLLGSGAHLRQTLGHIL >gi|299856442|gb|ADWV01000009.1| GENE 63 62611 - 62937 550 108 aa, chain + ## HITS:1 COG:ECs3267 KEGG:ns NR:ns ## COG: ECs3267 COG1445 # Protein_GI_number: 15832521 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Escherichia coli O157:H7 # 1 108 1 108 108 169 99.0 1e-42 MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATI IIHSVAVTPEDNERFESRDVYEITLQDAIKNAVGIIKEIEEMIASEQQ >gi|299856442|gb|ADWV01000009.1| GENE 64 62959 - 64206 1531 415 aa, chain + ## HITS:1 COG:ECs3266 KEGG:ns NR:ns ## COG: ECs3266 COG1299 # Protein_GI_number: 15832520 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli O157:H7 # 1 415 1 415 415 703 100.0 0 MAIKKRSATVVPGASGAAAAVKNPQASKSSFWGELPQHVMSGISRMVPTLIMGGVILAFS QLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSFGGVLFGFAIPMFAAFVAN SIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPVPSTFIGALIISIVAGYLVKW MNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITPFGGWINGGIRTVLTAAGEKGAL MYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLPVTARSIAIVIPPIGLGLATIIDRR LTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFALESPITAIPSYMVGAIVGSTAAVWLG AVQWFPESAIWAWPLVTNLGVYMAGIALGAVITALMVVFLRLMMFRKGKLLIDSL >gi|299856442|gb|ADWV01000009.1| GENE 65 64221 - 65306 1166 361 aa, chain + ## HITS:1 COG:ypdF KEGG:ns NR:ns ## COG: ypdF COG0006 # Protein_GI_number: 16130317 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Escherichia coli K12 # 1 361 1 361 361 695 97.0 0 MTLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGSGYVVISRESAHILVDSRYYVEVE ARAQGYQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWKSELNAKLVSAT PDVLRQIKTPEEVEIIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKAS FDTIVASGWRGALPHGKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESH PLFDVYQIVLQAQLAAISAIRPGVRCQQVDDAARQVITEAGFSHYFGHNTGHAIGIEVHE DPRFSPRDTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVTPQGAEVLYAMPKTVLLTGE A >gi|299856442|gb|ADWV01000009.1| GENE 66 65306 - 66343 902 345 aa, chain + ## HITS:1 COG:ypdE KEGG:ns NR:ns ## COG: ypdE COG1363 # Protein_GI_number: 16130316 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Escherichia coli K12 # 1 345 1 345 345 674 99.0 0 MDLSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGSVLIRLNESTGPKVMIC AHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDV SAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLGCYLLVTLLRE LHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAIVLDTACWAKNFDYGAANHRQIG NGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQADMFSNGGTDGGAVHLTGTGVPTVVM GPATRHGHCAASIADCRDILQMEQLLSALIQRLTRETVVQLTDFR >gi|299856442|gb|ADWV01000009.1| GENE 67 66368 - 68863 2597 831 aa, chain + ## HITS:1 COG:ECs3263_2 KEGG:ns NR:ns ## COG: ECs3263_2 COG1080 # Protein_GI_number: 15832517 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli O157:H7 # 98 683 1 586 586 1117 99.0 0 MLTIQFLCPLPNGLHARPAWELKEQCSQWQSEITFFNHRQNAKADAKSSLALIGTGTLFN DSCSLNISGSDEEQVRRVLEEYILVRFIDSDSVQPTQAELTAHPLPRSLSRLNPDLLYGN VLASGVGVGTLTLLQSDSLDSYRAIPASAQDSTRLEHSLATLAEQLNQQLRERDGESKTI LSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQVCAKLSASASDYLRERVSDIRD ISEQLLHITWPELKPRNNLVLEKPTILVAEDLTPSQFLSLDLKNLAGMILEKTGRTSHTL ILARASAIPVLSGLPLDAIARYAGQPAVLDAQCGVLAINPNDAVSGYYQVAQTLADKRQK QQAQAAAQLAYSRDNKRIDIAANIGTALEAPGAFANGAEGVGLFRTEMLYMDRDSAPDEQ EQFEAYQQVLLAAGDKPIIFRTMDIGGDKSIPYLNIPQEENPFLGYRAVRIYPEFAGLFR TQLRAILRAASFGNAQLMIPMVHSLDQILWVKGEIQKAIVELKRDGLRHAETITLGIMVE VPSVCYIIDHFCDEVDFFSIGSNDMTQYLYAVDRNNPRVSPLYNPITPSFLRMLQQIVTT AHQRGKWVGICGELGGESRYLPLLLGLGLDELSMSSPRIPAVKSQLRQLDSEACRELARQ ACECRSAQEIEALLTAFTPEEDVRPLLALENIFVDQDFSNKEQAIQFLCGNLGVNGRTEH PFELEEDVWQREEIVTTGVGFGVAIPHTKSQWIRHSSISIARLAKPIDWQSEMGEVELVI MLTLGANEGMNHVKVFSQLARKLVNKNFRQSLFAAQDAQSILTLLETELTF >gi|299856442|gb|ADWV01000009.1| GENE 68 68866 - 69723 616 285 aa, chain - ## HITS:1 COG:ECs3262 KEGG:ns NR:ns ## COG: ECs3262 COG2207 # Protein_GI_number: 15832516 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 285 1 285 285 575 99.0 1e-164 MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYG NLLEAKQQRMVEGEMLFIPARAANLPINNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPA RQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRNVVNMPPGNSQPRGD FLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARM ILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG >gi|299856442|gb|ADWV01000009.1| GENE 69 69736 - 70470 780 244 aa, chain - ## HITS:1 COG:ECs3261 KEGG:ns NR:ns ## COG: ECs3261 COG3279 # Protein_GI_number: 15832515 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Escherichia coli O157:H7 # 1 244 1 244 244 483 100.0 1e-136 MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLD GVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQ QQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNI TEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQ LMHL >gi|299856442|gb|ADWV01000009.1| GENE 70 70485 - 72164 1453 559 aa, chain - ## HITS:1 COG:ECs3260 KEGG:ns NR:ns ## COG: ECs3260 COG3275 # Protein_GI_number: 15832514 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Escherichia coli O157:H7 # 1 559 7 565 565 1123 100.0 0 MLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFSTWSGVPV EGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSILAGCISG WINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILGSVCIGF IVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAI TNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLW EKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAELRALQS KINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDY IAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECG NRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEI AFYIPNQRTPVASQATLLL >gi|299856442|gb|ADWV01000009.1| GENE 71 72559 - 73797 1328 412 aa, chain + ## HITS:1 COG:yfdZ KEGG:ns NR:ns ## COG: yfdZ COG0436 # Protein_GI_number: 16130311 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 412 1 412 412 847 100.0 0 MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCT VAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAIVTIGSKEGLAHLMLATLD HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFP SNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFF TLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIA EQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSP GIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRADGLLPASSKHIHENAE >gi|299856442|gb|ADWV01000009.1| GENE 72 74289 - 75209 787 306 aa, chain - ## HITS:1 COG:ECs3258 KEGG:ns NR:ns ## COG: ECs3258 COG1560 # Protein_GI_number: 15832512 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Escherichia coli O157:H7 # 1 306 23 328 328 625 100.0 1e-179 MFPQCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRIGAMARPFLKRRESIAR KNLELCFPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDSRVRKWFDVEGLDNLKRAQ MQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQLMEWVQTRGRMRSNKAMIGRN NLRGIVGALKKGEAVWFAPDQDYGRKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVT MVRKADYSGYRLFITPEMEGYPTDENQAAAYMNKIIEKEIMRAPEQYLWIHRRFKTRPVG ESSLYI >gi|299856442|gb|ADWV01000009.1| GENE 73 75562 - 75804 281 80 aa, chain + ## HITS:1 COG:no KEGG:SDY_2575 NR:ns ## KEGG: SDY_2575 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 80 1 80 80 111 100.0 7e-24 MIYLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIF MFLAPACGLMIRFMVGYGRR >gi|299856442|gb|ADWV01000009.1| GENE 74 76490 - 77122 645 210 aa, chain + ## HITS:1 COG:no KEGG:SDY_2573 NR:ns ## KEGG: SDY_2573 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 210 1 210 210 326 100.0 3e-88 MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAERISEQGLYAMRDVQ VARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISE SYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKL LDKKQYYEANLALKGAEDGIIVDSEALFVN >gi|299856442|gb|ADWV01000009.1| GENE 75 77635 - 78885 1030 416 aa, chain + ## HITS:1 COG:yfdW KEGG:ns NR:ns ## COG: yfdW COG1804 # Protein_GI_number: 16130306 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Escherichia coli K12 # 1 416 1 416 416 830 100.0 0 MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYF TMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAIDHMGFTWEHIQEINPRLI FGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPPLVSAAALGDSNTGMHLLIGL LAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRLDKLGYLEEYPQYPNGTFGDAVP RGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQNWENTCKAIGKPEWITDPAYSTAHA RQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIPCAPVLSMKEISLDPSLRQSGSVVEVE QPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEHTAAVLQELGYSDDEIAAMKQNHAI >gi|299856442|gb|ADWV01000009.1| GENE 76 78939 - 80633 1083 564 aa, chain + ## HITS:1 COG:ECs3253 KEGG:ns NR:ns ## COG: ECs3253 COG0028 # Protein_GI_number: 15832507 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 564 1 564 564 1079 99.0 0 MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYA AAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEE LDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEKDEA LTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESTQI PFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQ LDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMH EKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTW GVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYRG DGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTTDELRHALTTGIQSRKPTIINV VIDPAAGTESGHITKLNPKQVAGN >gi|299856442|gb|ADWV01000009.1| GENE 77 80703 - 81647 638 314 aa, chain + ## HITS:1 COG:ECs3252 KEGG:ns NR:ns ## COG: ECs3252 COG0679 # Protein_GI_number: 15832506 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 314 1 314 314 531 100.0 1e-151 MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYALPAALFVSITRANREM IFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCALIAGSPTIGFLGFAVLDPI YGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKKNSNLSALISAAKEPVVWAPV LATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLTLAAHKFEFSAEIAYNTFLKLIL MPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLGFV VTAPLWIYVSRLVS >gi|299856442|gb|ADWV01000009.1| GENE 78 81721 - 82866 569 381 aa, chain + ## HITS:1 COG:yfdE KEGG:ns NR:ns ## COG: yfdE COG1804 # Protein_GI_number: 16130303 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Escherichia coli K12 # 1 381 14 394 394 791 99.0 0 MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPLGHGDDTRTFGPYVDGQ SLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWEMLQEIN PRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYL FSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATGKSPQRLGNRHPYMAPFD VFNTQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQNQAILKQYIERTLKT QAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQARNMLIEAGGIMMPGNPIKISGCADPH VMPGAATLDQHGEQIRQEFSS >gi|299856442|gb|ADWV01000009.1| GENE 79 82922 - 85861 1090 979 aa, chain - ## HITS:1 COG:evgS_2 KEGG:ns NR:ns ## COG: evgS_2 COG0642 # Protein_GI_number: 16130302 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 313 732 1 420 420 841 99.0 0 MISRYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWLDT GNLAFLNKPLELTEHEKQWIKQHPDLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQ TGLNFSPITVSHNIHAGTQLNPGGWDIIPGAIYSEDRENNVSFAEAFITTPYVFVMQKAP DSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELDALVATQLN SRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPSEVLRLTEKW IKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKVIQGDLENQISFR KALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENSDSPFKDVFSNAHEV TAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDNAVYICGWQDITETRDLINAL EVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYATG QSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALSCSSTFPD HYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLVHIDDNHAVIKMTIMDSGSGLSQ EEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEI SQQVATVEAKAEHPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKV SMQHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTANAQANEREKGLSCGMNLCLF KPLTLDVLKTHLSQLHQVAHIAPQYRHLDIEALKNNTANDLQLMQEILMTFQHETHKDLP AAFQALEAGDNRTFHQCIHRIHGAANILNLQKLINISHQLEITPVSDDSKPEILQLLNSV KEHIAELDQEIAVFCQKND >gi|299856442|gb|ADWV01000009.1| GENE 80 86520 - 87134 360 204 aa, chain - ## HITS:1 COG:ECs3248 KEGG:ns NR:ns ## COG: ECs3248 COG2197 # Protein_GI_number: 15832502 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 204 1 204 204 392 100.0 1e-109 MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNG IQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNGY CYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKDNNDIAEKMFISNKTVSTYKS RLMEKLECKSLMDLYTFAQRNKIG >gi|299856442|gb|ADWV01000009.1| GENE 81 87550 - 88713 618 387 aa, chain + ## HITS:1 COG:emrK KEGG:ns NR:ns ## COG: emrK COG1566 # Protein_GI_number: 16130300 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 387 1 387 387 711 99.0 0 MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQ VSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSA EVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKAL IMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVV PARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQN ATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATIDTKNEDIAEMPELASTVTSMPA YTSKALVIDTSPIEKEISNIISHNGQL >gi|299856442|gb|ADWV01000009.1| GENE 82 88713 - 90251 468 512 aa, chain + ## HITS:1 COG:emrY KEGG:ns NR:ns ## COG: emrY COG0477 # Protein_GI_number: 16130299 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 512 1 512 512 910 99.0 0 MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTISGFLGASTDEGTWVIT SFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSLSTNLDVLIFFRVVQGLMA GPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPILGGYICDNFSWGWIFLINVP MGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVGGLQIMLDKGRDLDWFNSSTIII LTVVSVISLISLVIWESTSENPILDLSLFKSRNFTIGIVSITCAYLFYSGAIVLMPQLLQ ETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNKIDMRVLVTFSFLMYAVCYYWRSVTFM PTIDFTGIILPQFFQGFAVACFFLPLTTISFSGLPDNKFANASSMSNFFRTLSGSVGTSL TMTLWGRRESLHHSQLTATIDQFNPVFNSSSQIMDKYYGSLSGVLNEINNEITQQSLSIS ANEIFRMAAIAFILLTVLVWFAKPPFTAKGVG >gi|299856442|gb|ADWV01000009.1| GENE 83 90359 - 91687 1122 442 aa, chain - ## HITS:1 COG:dsdA KEGG:ns NR:ns ## COG: dsdA COG3048 # Protein_GI_number: 16130298 # Func_class: E Amino acid transport and metabolism # Function: D-serine dehydratase # Organism: Escherichia coli K12 # 1 442 1 442 442 871 100.0 0 MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFA PYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKAR GGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSA RIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDEN SRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVH CFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGF YTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHL VWATGGGMVPEEEMNQYLAKGR >gi|299856442|gb|ADWV01000009.1| GENE 84 91705 - 91923 199 72 aa, chain - ## HITS:1 COG:dsdX KEGG:ns NR:ns ## COG: dsdX COG2610 # Protein_GI_number: 16130297 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli K12 # 1 72 374 445 445 126 100.0 9e-30 MLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVV ALAGTFLLSFII >gi|299856442|gb|ADWV01000009.1| GENE 85 92211 - 93161 617 316 aa, chain + ## HITS:1 COG:ECs3244 KEGG:ns NR:ns ## COG: ECs3244 COG1609 # Protein_GI_number: 15832498 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 316 16 331 331 624 99.0 1e-179 MTVSRVMHNAESVRPATRDRVLQAIQTLNYVPDLSARKMRAQGRKPSTLAVLAQDTATTP FSVDILLAIEQTASEFGWNSFLINIFSEDDAARAARQLLAHRPDGIIYTTMGLRHITLPE SLYGENIVLANCVADDPALPSYIPDDYTAQYESTQHLLAAGYRQPLCFWLPESALATGYR RQGFEQAWRDAGRDLAEVKQFHMATGDDHYTDLASLLNAHFKPGKPDFDVLICGNDRAAF VAYQVLLAKGVRIPQDVAVMGFDNLVGVGHLFLPPLTTIQLPHDIIGREAALHIIEGREG GRVTRIPCPLLIRCST >gi|299856442|gb|ADWV01000009.1| GENE 86 93169 - 94602 667 477 aa, chain - ## HITS:1 COG:ECs3243 KEGG:ns NR:ns ## COG: ECs3243 COG1621 # Protein_GI_number: 15832497 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Escherichia coli O157:H7 # 1 477 1 477 477 967 98.0 0 MTQSRLHAAQNALAKLHEHRGNTFYPHFHLAPPAGWMNDPNGLIWFNDRYHAFYQHHPMS EHWGPMHWGHATSDDMIHWQHEPIALAPGDDNDKDGCFSGSAVDDNGVLSLIYTGHVWLD GAGNDDAIREVQCLATSRDGIHFEKQGVILTPPEGIMHFRDPKVWREADTWWMVVGAKDP GNTGQILLYRGSSLREWTFDRVLAHADAGESYMWECPDFFSLGDQHYLMFSPQGMNAEGY SYRNRFQSGVIPGMWSPGRLFAQSGHFTELDNGHDFYAPQSFLAKDGRRIVIGWMDMWES PMPSKREGWAGCMTLARELSESNGKLLQRPVHEAESLRQQHQSVSPRTISNKYVLQENAQ AVEIQLQWALKNSDAEHYGLQLGTGMRLYIDNQSERLVLWRYYPHENLDGYRSIPLPQRD TLALRIFIDTSSVEVFINDGEAVMSSRIYPQPEERELSLYASHGVAVLQHGALWLLG >gi|299856442|gb|ADWV01000009.1| GENE 87 94818 - 95732 359 304 aa, chain + ## HITS:1 COG:ECs3242 KEGG:ns NR:ns ## COG: ECs3242 COG0524 # Protein_GI_number: 15832496 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 304 1 304 304 611 99.0 1e-175 MSAKVWVLGDAVVDLLPESDGRLLPCPGGAPANVAVGIARLGGTSGFIGRVGDDPFGALM QRTLLTEGVDITYLKQDEWHRTSTVLVDLNDQGERSFTFMVRPSADLFLETTDLPCWRHG EWLHLCSIALSAEPSRTSAFTAMTAIRHAGGFVSFDPNIREDLWQDEHLLRLCLRQALQL ADVVKLSEEEWRLISGKTQNDRDICALAKEYEIAMLLVTKGAEGVVVCYRGQVHHFAGMS VNCVDSTGAGDAFVAGLLTGLSSTGLSTDEREMRRIIDLAQRCGALAVTAKGAMTALPCR QELE >gi|299856442|gb|ADWV01000009.1| GENE 88 95804 - 96091 264 95 aa, chain + ## HITS:1 COG:ECs3241 KEGG:ns NR:ns ## COG: ECs3241 COG0477 # Protein_GI_number: 15832495 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 95 1 95 415 171 100.0 3e-43 MALNIPFRNAYYRFASSYSFLFFISWSLWWSLYAIWLKGHLGLTGTELGTLYSVNQFTSI LFMMFYGIVQDKLGLKKPLIWCMSFILVLTGPFMI >gi|299856442|gb|ADWV01000009.1| GENE 89 96207 - 97052 263 281 aa, chain + ## HITS:1 COG:ECs3241 KEGG:ns NR:ns ## COG: ECs3241 COG0477 # Protein_GI_number: 15832495 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 281 135 415 415 505 99.0 1e-143 MARNFHFEYGTARAWGSFGYAIGAFFAGIFFSISPHINFWLVSLFGAVFMMINMRFKDKD HQCVAADAGGVKKEDFIAVFKDRNFWVFVIFIVGTWSFYNIFDQQLFPVFYAGLFESHDV GTRLYGYLNSFQVVLEALCMAIIPFFVNRVGPKNALLIGVVIMALRILSCALFVNPWIIS LVKLLHAIEVPLCVISVFKYSVANFDKRLSSTIFLIGFQIASSLGIVLLSTPTGILFDHA GYQTVFFAISGIVCLMLLFGIFFLSKKREQIVMETPVPSAI >gi|299856442|gb|ADWV01000009.1| GENE 90 97703 - 98548 201 281 aa, chain + ## HITS:1 COG:no KEGG:SARI_00213 NR:ns ## KEGG: SARI_00213 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_arizonae # Pathway: not_defined # 1 281 1 281 281 503 88.0 1e-141 MKNWAPEHTKEIKLWLDISTYRKFEDLSLIQFYHELWARNLFFKEYREDFESKELMVYFS KIFSGNPFLIEEGQLGYMAPANKLFQPPHFFLTTLDRLAETSIIAMQRGGFVWHEGDNYS INRELREESLSDIMPDQFSRTVMFEIDLASGTDEEIAESLKTALPQWRKVKGIDENPLES VRFGYGTIKKLISYRVIPMLDILVWAAVKKIRVSDDRLSRLLYTDNDEESEVRLPNQIKD TDRPLALKACTIAFIRQFNHFINKNNHLKQIKVNDVIKLTD >gi|299856442|gb|ADWV01000009.1| GENE 91 98961 - 99362 452 133 aa, chain + ## HITS:1 COG:ECs1739 KEGG:ns NR:ns ## COG: ECs1739 COG2916 # Protein_GI_number: 15830993 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Escherichia coli O157:H7 # 1 133 1 135 137 119 61.0 1e-27 MSESIKILNNIRTLRAQAREFSLETLDEMLEKLTTVVEERRQEYVSYRKEREERQAKLEA FRLQLLEDGIDPADLLSGLSSSSKPKSNREPRPAKYKYIDENGEQKTWTGQGRTPKAIAT AIEAGKALEDFAI >gi|299856442|gb|ADWV01000009.1| GENE 92 100179 - 100817 142 212 aa, chain + ## HITS:1 COG:no KEGG:Acry_0802 NR:ns ## KEGG: Acry_0802 # Name: not_defined # Def: hypothetical protein # Organism: A.cryptum # Pathway: not_defined # 2 212 93 304 305 229 52.0 4e-59 MPKLDHLYIVTTAPRDAKLQKSVREISQKHSKAGDFRIDVLFWDDICNDLAKDEDVFFGH YPQFKSDDNPGKKHDIALWSELTTLLRSDGVIGFLDRTNMAGFSFRESQLEPIREFYFEW NNPEHEFITPELEKINKELWSEVDRYYNLIANETFPANNPQFSTVPPEWEFEQPDRFWRV VNALHDHAGKIVKLHADIVRTGREKFLNSGNK >gi|299856442|gb|ADWV01000009.1| GENE 93 101218 - 101637 190 139 aa, chain + ## HITS:1 COG:no KEGG:ECA2901 NR:ns ## KEGG: ECA2901 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 1 126 1 126 147 96 42.0 2e-19 MMNEIVKWAKQWPEANILKITLGEGDAYDENMERRNRFYEQFGIEFNYHDESRKTGASRP MKAHKLNTVDFWDKNKNGNIIVQNCRDFMISVITKNDKLLKENNEITIKNEKLKKKISFF ESNPIKTGIKQILGLNNYR >gi|299856442|gb|ADWV01000009.1| GENE 94 101708 - 102247 88 179 aa, chain + ## HITS:1 COG:no KEGG:ECA2902 NR:ns ## KEGG: ECA2902 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 16 142 2 124 142 89 40.0 5e-17 MIHINFSNCQEKIQRYLNIFYKEHKIFEDRYLSEELNVLLNRWSTDKKKRDYYTILDEIL FDIPVEKQINFIEYWSETIPKLSNDYHYSDPREEAYQWSSMVRKGEIMVKKAIELKLLNT IAWPELMSAAEDILPEFEINKLVERYDGLVPVWALWHVVKEYTNFIEGRLREMKVENLK >gi|299856442|gb|ADWV01000009.1| GENE 95 102593 - 102751 125 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300817403|ref|ZP_07097620.1| ## NR: gi|300817403|ref|ZP_07097620.1| toxin-antitoxin system, antitoxin component, Xre domain protein [Escherichia coli MS 107-1] # 1 52 1 52 52 72 100.0 8e-12 MQNQTEEAKRILKTDGYSGSNPVLSRLMEEVRNEKNTTVGSRYDRVHNRHNR >gi|299856442|gb|ADWV01000009.1| GENE 96 103364 - 103876 77 170 aa, chain + ## HITS:1 COG:no KEGG:SJA_C1-31970 NR:ns ## KEGG: SJA_C1-31970 # Name: not_defined # Def: putative radical SAM # Organism: S.japonicum # Pathway: not_defined # 1 165 211 375 382 149 38.0 3e-35 MPYGKKDLQTTEYGEWLAKVFELYMEDSNPVPIKILDDILKIYLGGSPIKEGKGNNEFGI LIIESDGEIRKNDTLRASFEGVDFFKGRPSVHNTSLMDVVESEEYIIYTKSSSPLSAECQ LCEYKDVCGGGMPLYRWSKTKGFDNPSIYCADHKIVISTVKKFLQRSKLL >gi|299856442|gb|ADWV01000009.1| GENE 97 104156 - 104485 82 109 aa, chain + ## HITS:1 COG:no KEGG:SJA_C1-31990 NR:ns ## KEGG: SJA_C1-31990 # Name: not_defined # Def: hypothetical protein # Organism: S.japonicum # Pathway: not_defined # 3 107 98 202 202 106 43.0 3e-22 MVLKNKVDIVAHKLISGDKIKIHNDFIEGQESHRILFHFNKNWKEENGGYFMIFSKDEPE SLEKIIPPLHGSVQGFEISQNSHHAVSQVYDFERYTVIYSFYRKGNENI >gi|299856442|gb|ADWV01000009.1| GENE 98 104610 - 105254 7 214 aa, chain + ## HITS:1 COG:no KEGG:SJA_C1-32000 NR:ns ## KEGG: SJA_C1-32000 # Name: not_defined # Def: hypothetical protein # Organism: S.japonicum # Pathway: not_defined # 75 209 38 172 191 90 37.0 2e-17 MGIDYLVPKFLDEMEKVDWEKMGLTFCDKKEFSSSEYERLLSKIESLLYFSKNMHSSIKA FAINFHPLLSECEDFDVSFSDPCIPFDVFTNVPKYEEKYAAERFVEGIIHETLHLQLTAM EHLLPLFHDTLLTDNVFSPWKGEGRNERGLLHAVYVFSNIKNFWLKVHAQSNHINDFAVK RINEIQKELSTAGHILKSDALTPEGRMLACLCLL >gi|299856442|gb|ADWV01000009.1| GENE 99 105737 - 106345 272 202 aa, chain - ## HITS:1 COG:CAC3350 KEGG:ns NR:ns ## COG: CAC3350 COG0693 # Protein_GI_number: 15896593 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Clostridium acetobutylicum # 1 192 1 194 195 210 53.0 1e-54 MKKVILFLCQGLEEYEASVFTDTIGWTTTYGLEPIELVTVGLRQKVKCAWNFTIEPEYQL HEIDDDGFDAIAIPGGMSRAGFYEDAFDERLLRLIQKFNAKNKIIASVCVGALAIAKSGA LQGRTGTTYHLSSKRQAQLLEMGVHVVQHPIVVDGNIITSQSPATAINVAFTLIEKLTSR ANVERIKEGMGFAPLSIDPSGM >gi|299856442|gb|ADWV01000009.1| GENE 100 106365 - 106544 67 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNVMECPLLAQSSPSVSRACLLCAKSGNSLHSLSSGRLNPYRQQVKNAECLCYRYCEFI >gi|299856442|gb|ADWV01000009.1| GENE 101 106611 - 107102 94 163 aa, chain - ## HITS:1 COG:PA2496 KEGG:ns NR:ns ## COG: PA2496 COG2318 # Protein_GI_number: 15597692 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 163 6 168 171 101 31.0 7e-22 MDTDKLVTLFRYKRWIDIETLQAIKRIDTSVNAEKHHLTLRLMNHIHVVDSIFRANVTGQ KHSYTALNTPETPSADELLITMTECTDWYIQHVNSMSSAELAETIKFQFVDGGHGEMKAF DMLNHVLFHGTYHRGAVGWLISESGVVPPKDVLTVFLRDHNHE >gi|299856442|gb|ADWV01000009.1| GENE 102 107574 - 107813 85 79 aa, chain + ## HITS:1 COG:no KEGG:Ctu_1p00160 NR:ns ## KEGG: Ctu_1p00160 # Name: not_defined # Def: hypothetical protein # Organism: C.turicensis # Pathway: not_defined # 1 69 93 161 161 80 50.0 1e-14 MMLPSGETVFAEERFFMINANTVDLDRSGWSSNEKEVIRDHHWWTIEELIHTNETIFPRD LIISILENKSAGSSTLTAS >gi|299856442|gb|ADWV01000009.1| GENE 103 107849 - 108643 335 264 aa, chain - ## HITS:1 COG:PA0791 KEGG:ns NR:ns ## COG: PA0791 COG2207 # Protein_GI_number: 15595988 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 1 250 1 249 262 272 56.0 5e-73 MRNVKIEDVDKLDREVVALGNDYAQGFILPQHQHRRAQLLYGATGLMYVSTCNGEWVVPP QHAVWIPPETPHAVRFVGVTTRSLYIEPTCVTGSIEYRHCKVISVSPLLRQLLLDAVDLP LMYDSARDRALVNLLLLELAEMPVREFDIPLPQHPALLALCQAFLLTPSIHDPAERWAST LFMSASTFRRLFLRQTGMSFSAWRQRACVVSALTLLITGKPVNEVALTLGYDNASSFATM FRRVTGQPPSYCRLDFKSFTGHRS >gi|299856442|gb|ADWV01000009.1| GENE 104 108753 - 109544 402 263 aa, chain + ## HITS:1 COG:PA0790 KEGG:ns NR:ns ## COG: PA0790 COG0730 # Protein_GI_number: 15595987 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pseudomonas aeruginosa # 6 261 5 269 271 153 47.0 4e-37 MNDIAIIALAGFTTGITTVLFGFGGGFVVVPFVYQLMLRQSELAGNAMHIAVATSTAVMI FNAGWVSYRNWRAGKLSAQTLFPLLWFIAIGAVVGSCLAGVFSENIVRALFILYMLVTIG DCLLRKGFFICSSPRRLSLSVVTGGGVIIGMIAALLGVGGSVMTVPLLRRHGYAMGECIS ASNPLSLPVALCGAVTYAVIGWQNIPVSGFLGFISLKILGLLVLTGWAGIVFSRRVIPAL PDIWHARIYVILLCLVLLAMLLQ >gi|299856442|gb|ADWV01000009.1| GENE 105 109936 - 110373 346 145 aa, chain - ## HITS:1 COG:no KEGG:LPC_0165 NR:ns ## KEGG: LPC_0165 # Name: not_defined # Def: hypothetical protein # Organism: L.pneumophila_Corby # Pathway: not_defined # 1 64 160 223 434 74 50.0 1e-12 MGFSELRGKKDEAVAHLALVNGWSLQGAFDYVDEAFDVWRARSRHAWQLDISWLETHGIK LKDETAAEGDNIPPENQLSLELEVPPVAMESTAVSAVVEQESNSCEMGQILKDKTVSRSS SAWPAFWSVCQRVFYRVKKVIREQW >gi|299856442|gb|ADWV01000009.1| GENE 106 111285 - 111491 223 68 aa, chain + ## HITS:1 COG:ECs3513 KEGG:ns NR:ns ## COG: ECs3513 COG3311 # Protein_GI_number: 15832767 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 68 1 68 68 102 72.0 1e-22 MNNQPTRLIRLPEVIARTGYGKAWIYHLISKGRFPQPVKIGLRAIAFVESEVEEWIQSVI ETTRKNVA >gi|299856442|gb|ADWV01000009.1| GENE 107 111452 - 111703 222 83 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGSKHIDCFKWSTRVSNKILAQHINSFSSKLVISEFSNGIKIKNLVKQPLTKVAHMILTY KAFNIHFPSPAQATFFLVVSITD >gi|299856442|gb|ADWV01000009.1| GENE 108 111880 - 112191 280 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300817416|ref|ZP_07097633.1| ## NR: gi|300817416|ref|ZP_07097633.1| hypothetical protein HMPREF9345_02477 [Escherichia coli MS 107-1] # 1 103 1 103 103 197 100.0 2e-49 MKAKKTKGNKSKTNEPQIITINNNGVINGKVMCTVIMHEDDLKVCFETLPNKYGEPIVGD YTGVLMSFLCNSIWYGFGNAIIDVVLDDAIREQVKKLEEQNKM >gi|299856442|gb|ADWV01000009.1| GENE 109 113400 - 113651 157 83 aa, chain + ## HITS:1 COG:ECs3512 KEGG:ns NR:ns ## COG: ECs3512 COG0582 # Protein_GI_number: 15832766 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 2 78 322 396 401 58 35.0 4e-09 MPELCNLTGHKLRHTWNYEFSKKLDEMPERVSEAEQEKMRSNLMGWTPGSGTAQIYNKRF IQDKSHKVAIKLQEDINKKGEVE >gi|299856442|gb|ADWV01000009.1| GENE 110 113648 - 115189 92 513 aa, chain + ## HITS:1 COG:PM1948 KEGG:ns NR:ns ## COG: PM1948 COG0582 # Protein_GI_number: 15603813 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Pasteurella multocida # 19 506 12 502 506 210 28.0 6e-54 MNSVHKVLMSKDLIPAKMDGYYFSPQEDVWVLDRNNQINKKAVTDVLNDNLKEGYLNTIA LFARDYSASFASKIHGAFLAFIKEEQCVYVSKASVLNFRSKKHVKDELLFRLRIFITKWY SLGYNGIASEAVQIMKTWKLVNGKPGDVVKRKEPIQGPLTDIELQEFNEGAIRAYEKKEI SLFMLTMALIISHTGRRPLQVTQMKITDILKVSKEEGEIYYLLNIPRIKQGLGFREEFRT FRITKDLYELVCKQAKDSLAMLSEFMGRQLTTEESKDVPLFISKNKIGLIDKSVSLDFYL KTDVLHHYRGKLTEVLKVVIKKENVFSERTGESLHINARRFRYTLGTRAAREGYGEFIIA ELLDHSTIKSVGVYVQNHVDNAYKIDKTMGQALTGISCVFRGEVKRKEDIEYDITPDIKI KNHDGEDTGSCKQCSTCSANVPIPCYTCMHFTPWLDGPHEKVYQYLIGERERIYSITNDS IVTESLDRTIIAVKEVINHCNIMRSSHKGNKSI >gi|299856442|gb|ADWV01000009.1| GENE 111 115186 - 117192 651 668 aa, chain + ## HITS:1 COG:ECs3510 KEGG:ns NR:ns ## COG: ECs3510 COG4688 # Protein_GI_number: 15832764 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 4 614 2 537 543 352 35.0 1e-96 MTDSNVLFFRKKIDINAELNLKEFIRFCRYDLTALGSDFNWESYEWRGVAVFTKINLKRK VKTDKEQLLDEEYIDFAKAYMRYQSALTKSRWKLSASLTILKVVEQTLLMVNKNANITGV SIPVLDEAIQTIKSLYKEHPAYDYGLELQKFVKFLGENGLLIAGVLSWVSPIKPPEPVNR VSKKADEARLSKLPDETALNAMAEIFSLPDEALSCRDIFTTSIFALLMCAPSRISEILAL PCDCEITETDSNGVERYGLRFYSLKGYGADIKWIPDVMVPVARRAIERLKKLSKNAREFA QWVEENPSTFFRRDSLPETGENEILKPWQICEGLGYNLERKNGNVKFLSGVSFYNSQKKY TMNSLWEIILSRLPEGFPWYDKNKGIKYSNALCLLNIHQLEKRNETIIYELQKPTKNIFM IDISENKYEGLRFENIFTRHRYIGPEGKALHLRSHQPRHLLNTIGQRNGMSDLDLAKWSG RSLVTQNPVYNHVSEDEMLRKAETLDISTIGSQAFMIDSVKPNLPVTPGMINLWEHGAVH ATEFGYCVHDYMMSPCDKFRDCINCNEQVCVKGEEEKLQRLKERRNMTEGLLSRARESMT EEELGADRWVQHHELTLTRLNELIAILSNNEIPVGSRIKPGGESFTQLGRVLNKFENLEN NRNDKYIE >gi|299856442|gb|ADWV01000009.1| GENE 112 117207 - 117605 202 132 aa, chain + ## HITS:1 COG:no KEGG:Tcr_0331 NR:ns ## KEGG: Tcr_0331 # Name: not_defined # Def: hypothetical protein # Organism: T.crunogena # Pathway: not_defined # 1 131 1 131 136 131 51.0 6e-30 MAKHLNRNDIDTIINTIIVWDSDKITWDEICNAVEPLIGKKPTRQSLNMNKDIVEAYQNR KKGIRATDNEVRKPANLKIAAARIANLEKRVHHLEEQNKNLKEQFVKWQYNAYKHGMEEH QLNEDLPTIERH >gi|299856442|gb|ADWV01000009.1| GENE 113 117752 - 118177 193 141 aa, chain + ## HITS:1 COG:no KEGG:SARI_00220 NR:ns ## KEGG: SARI_00220 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_arizonae # Pathway: not_defined # 1 141 4 144 144 217 91.0 8e-56 MDKININPDFTLEEQLIIIVDKYISKRYHPRDKSFSYQLYLIFVGYHLKYFYPERIYSKS NRNIDNIMAMFSSVYKSLTSNLLQRLNNKQGVLRELNSLVNYIDNNQEKAEEIYATVRAQ YEMKVIEKELIHEVRVRTIRL >gi|299856442|gb|ADWV01000009.1| GENE 114 118229 - 118417 145 62 aa, chain - ## HITS:1 COG:no KEGG:SARI_00221 NR:ns ## KEGG: SARI_00221 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_arizonae # Pathway: not_defined # 1 62 43 104 104 109 100.0 4e-23 MKALNSSIPEKDLLRIDYVKKVSCTEEANNVYNCIVDASISNMKQTKPVKLVKADGVWKE VQ >gi|299856442|gb|ADWV01000009.1| GENE 115 118562 - 118732 222 56 aa, chain - ## HITS:1 COG:no KEGG:CKO_03957 NR:ns ## KEGG: CKO_03957 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 56 73 128 128 86 83.0 3e-16 MYNNQFNATTFIPVVGLFTGGSQTQSKTIEIDFKGEIVNKWTFSTDNNNTKTGVIN >gi|299856442|gb|ADWV01000009.1| GENE 116 119486 - 120640 100 384 aa, chain - ## HITS:1 COG:no KEGG:Dd703_2943 NR:ns ## KEGG: Dd703_2943 # Name: not_defined # Def: relaxase/mobilization nuclease family protein # Organism: D.dadantii # Pathway: not_defined # 1 384 1 386 386 560 75.0 1e-158 MKGMQKIKRGKSFAGVVQYALKPGSHHKSNPIVIGGNMLGGSALELISEFNGTKQLRPDV QKAVWHNSLRLPEGETLSNDQWVSIADDYMKKMGFSDTHLRCYVLHDDEGQHIHIIASRI DIAGGKLYLGRNENLISTRIISELEMSHGLTVTKTASPPSQAQPKRKRVSRNEQMLSART GVPCPKEALQQIIDKSMTDKPDLLTFVKRLEDSEVGCKANIASTGKMNGFSFEYRNIAFK ASQLGKAYSWVNLQKQLNYNQNHLEVLRATKEAIPIPVPVPVPVPVPIESTARTTAQSES IGEKIAEIEQRLREDRRNEIVEKILQKNAVKQQKHLRLIGWLPFLRRLAELLRSYGKSIL HKPLPGFSKLDATRTLHKGRKIHL >gi|299856442|gb|ADWV01000009.1| GENE 117 120609 - 120860 101 83 aa, chain - ## HITS:1 COG:no KEGG:CKO_03955 NR:ns ## KEGG: CKO_03955 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 83 60 142 142 141 89.0 6e-33 MASLQKLPPVIPAINTKAWIALTDISQKLNRIAIHIDGKSKDSKLTHTELFAVKRQLEEL RQHLLNADIWSKPYEGYAEDQKG >gi|299856442|gb|ADWV01000009.1| GENE 118 121442 - 121801 150 119 aa, chain + ## HITS:1 COG:no KEGG:CKO_03954 NR:ns ## KEGG: CKO_03954 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 119 1 119 119 197 99.0 7e-50 MFLLAKEYDNSLNAAKIINIIDAPIKILEDINDKERFLPYSFNPFQKPETDVARFDKSMI SNGTFIFKYSFNKKTEPPAKTKKKNLTKSVVSTSFLRTKAIIPIIENTGENKAPVFKMG >gi|299856442|gb|ADWV01000009.1| GENE 119 121921 - 122097 133 58 aa, chain + ## HITS:1 COG:no KEGG:CKO_03952 NR:ns ## KEGG: CKO_03952 # Name: not_defined # Def: hypothetical protein # Organism: C.koseri # Pathway: not_defined # 1 58 1 58 58 77 94.0 2e-13 MIIDGSIIYDLGILNIITTIVALTDISIFGIVFDIKIRKLSHFLFHIKRRSNNFTSIK >gi|299856442|gb|ADWV01000009.1| GENE 120 122746 - 122925 182 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWLKIFNSNPDDINLVKINQLNSEELETLLSVLLNKNVLLCWGGYDNEGNEVLVGGTAE >gi|299856442|gb|ADWV01000009.1| GENE 121 123041 - 123292 138 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|163756965|ref|ZP_02164072.1| ## NR: gi|163756965|ref|ZP_02164072.1| hypothetical protein KAOT1_04625 [Kordia algicida OT-1] # 4 80 6 79 83 63 46.0 5e-09 MKAYTLKEHEDSGELHLFEGDMNPEGSEYKCNSGSKSICKKMNTSDNKGNRFACATDQEA REKIAKIGRKVCGTCVSHLYTSY >gi|299856442|gb|ADWV01000009.1| GENE 122 123422 - 123655 178 77 aa, chain - ## HITS:1 COG:YPO0973 KEGG:ns NR:ns ## COG: YPO0973 COG3157 # Protein_GI_number: 16121277 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Yersinia pestis # 1 73 1 73 163 86 58.0 9e-18 MAIPGNVWLYDDGGALIKGGCDVADREFSIEFNRFHHNLSIPTDNATGKPTGTLQHSPMI IVKEFGYSSPYFYGGLN >gi|299856442|gb|ADWV01000009.1| GENE 123 124055 - 124327 138 90 aa, chain + ## HITS:1 COG:no KEGG:KPK_4439 NR:ns ## KEGG: KPK_4439 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae_342 # Pathway: not_defined # 1 90 3 92 92 115 62.0 3e-25 MWEKILQKNLYSEWVIRNTLYWMTPVSPWKLEENTSSWIIFFEIGGPECEFEFGRLLNDF SLREKLHHQTGQLRDAIISKVLRSIDDRLA >gi|299856442|gb|ADWV01000009.1| GENE 124 124810 - 125715 337 301 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2894 NR:ns ## KEGG: Ent638_2894 # Name: not_defined # Def: radical SAM domain-containing protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 301 162 462 462 615 98.0 1e-175 MGSDAFEMVIATSLSLLDESILSWVKERNITFSVSLDGNEAVHNKNRILTDFQAHNKAVT GIRKITEELGANRVATVTTVTKELTKEPASIVDAHLSLGLTDMFIRPVSPYGFAQKQSFT FSMPEYFAFYKELMQEVLIQDEKGIPVIEHSAAIHLKRIFNPCFSGYADLKSPSGVVLNC ILFNYDGKVYGSDESRMLQKVNPEADFSAGEFASLSFSSNEYYRSALSSSFNFAMPGCDT CAYQPFCGADPCQNISVHGEPVGDKSRSTFCQYHKGMFRFLLNEISQDGPMAKMLKGWAY V >gi|299856442|gb|ADWV01000009.1| GENE 125 126260 - 126820 -6 186 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2893 NR:ns ## KEGG: Ent638_2893 # Name: not_defined # Def: radical SAM domain-containing protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 186 185 370 370 385 97.0 1e-106 MKERSEKLKITFGIPLYSSRSSVHDYLVGSEGAFDETVMGLINAGNSGINIELRIIPTLA NYMELDKIIEFAGRVFSNINQISLMGLESIGWARKNWSSIFIEHDSYSEKILSAIGTAQR SGITLTIFNYPLCHLPERAWGFATQSISDWKNYYPKECDECTQKSSCAGYFSSSKGRFHQ PPRPIL >gi|299856442|gb|ADWV01000009.1| GENE 126 127071 - 127274 108 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIKRLRFSVSEASPLLARVVPFIPAEFVVVEASASLERSERTDEEDDGEFVPEVDEPDEL GELYVLG >gi|299856442|gb|ADWV01000009.1| GENE 127 127207 - 127452 109 81 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2892 NR:ns ## KEGG: Ent638_2892 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 81 131 211 211 148 98.0 5e-35 MNGTTRASSGLASDTEKRKRLIMRVQFALLDKGFYNGNIDGSMGPATRTAIKNYRVAYGL PTPVRETLDAQLLNSLNILAR >gi|299856442|gb|ADWV01000009.1| GENE 128 127471 - 129078 305 535 aa, chain + ## HITS:1 COG:no KEGG:Ent638_2891 NR:ns ## KEGG: Ent638_2891 # Name: not_defined # Def: hypothetical protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 535 1 535 535 1011 95.0 0 MKIKLSIYKTKRFSDDIDQVLNLERVKRPVEFEMEDARAYLYVKEYMDPKPPEWTTFFMD QNPGIEPDFFGMNSSTGAVLVIEANNSRYLIPFGTGHHLINDGSIVKGFGLKTTLNSIEH KKIRSLDKGSHNETNLLTRSQSSKEVDIYNLKIDSEMDILTTLTGTSTEDILGSKITGKD AFVIMPDIELKAIPALLTKIDSIYLLPLPEEFEWVNNIKEADEQEVEILDSLLIDRIKEK DFNDLWLGEPEIVDWENQIGYCFDKRQRFIHETLSIYHVCDYFDGKKTEVTVDELKKNYL HVLNADFESIKKWSLYRCLYAEIKEGDQNYILRDSIWYVADRNFVSTIDDEMKKIIHYEE SDKFPVYSYKREEDYNKKLCQDDNSFTHMDQKFIHHGGGKSKIEFCDLIRGQSDFIHVKY YTGSQSMSHLFSQGFIGSELFISDSEFRGKLNEKLPAHIKLADHINRPDAKKYKLVFAIA SNKNLPEDLPLFSKVNLKNFHKSITNFGYEVRICKIAVDPDIYKKKLCKPQKNKL >gi|299856442|gb|ADWV01000009.1| GENE 129 129578 - 130474 279 298 aa, chain - ## HITS:1 COG:AGpA52_1 KEGG:ns NR:ns ## COG: AGpA52_1 COG1475 # Protein_GI_number: 16119267 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 123 5 128 131 76 35.0 6e-14 MIQIRFGDNFIYLETNKLIPSKELLENVKLSHKYHQIVTSIESLGIIEPIIVFYDKDKDA IKILDGHLRVEALKDLGIEKAPCILSSIDDAFTPNKQVNHINVVEEHRMIIKSLAKVSIE KLSAALGISVDAIKDKANVMNGIDPSVIAKLSDKPIPKATFDVLRKMKPIRQIEAVGTMI NFDNYSKKFAMSILDATPASMIVNKGKNTPYKKDIKKTILRLEQEMATTSEETKKLQTEY GSDMLKFVIIQSYINKLLGNSKVLHWFLENEVDYLNELKRISKINSLDDKTLAENSQS >gi|299856442|gb|ADWV01000009.1| GENE 130 130471 - 130941 194 156 aa, chain - ## HITS:1 COG:AGpA53 KEGG:ns NR:ns ## COG: AGpA53 COG1475 # Protein_GI_number: 16119268 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 146 141 285 295 80 28.0 8e-16 MLLDKGEHKLLSAVERGNLPLYLAVQFARCDTEEAQDILTEAYDKKLIKSRDIIKIKHIL NQRTIGNKGAKAAGFYYHKPSKRMTAEELIELYENSIAEHKSVYNNSKFIKTNLLIVNEI FNVIMMNKSFQNILEQENLSELPSQILNPINKEASK >gi|299856442|gb|ADWV01000009.1| GENE 131 131238 - 131366 76 42 aa, chain - ## HITS:1 COG:no KEGG:B21_02475 NR:ns ## KEGG: B21_02475 # Name: ybl115 # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 42 1 42 298 72 95.0 7e-12 MLPESNEFPIIQIEIAKIKFLNPRTRNKVVHEEIKESIKKEG >gi|299856442|gb|ADWV01000009.1| GENE 132 131356 - 131538 104 60 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_2906 NR:ns ## KEGG: EcE24377A_2906 # Name: not_defined # Def: resolvase family site-specific recombinase # Organism: E.coli_E24377A # Pathway: not_defined # 1 60 459 518 518 111 95.0 9e-24 MDSQNISPLDFYIIPKIENEYSKMWMTETNNIRLDLYRFDNLDKLLQIITRMKVRELYAA >gi|299856442|gb|ADWV01000009.1| GENE 133 133210 - 133353 111 47 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 1 44 359 402 406 47 45 1e-15 FRTDVFEAALTHSKKDEIIAAYNRAEYPTERVVLMQWWSDYVASQKC >gi|299856442|gb|ADWV01000009.1| GENE 134 133367 - 133660 141 97 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 11 95 260 343 406 58 34 1e-15 MGSPAEAVRTRWTDIDIETGMWNIPAEFMKMKKPHKVPLSKEALRVLESMKVISGHREWV FPSIKAPLNHMHEQTANAAIIRMGFGGKLVAHGMRCC >gi|299856442|gb|ADWV01000009.1| GENE 135 134098 - 134463 72 121 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300817440|ref|ZP_07097657.1| ## NR: gi|300817440|ref|ZP_07097657.1| conserved domain protein [Escherichia coli MS 107-1] # 1 121 1 121 121 218 100.0 8e-56 MIKQKLKNDWDIPAILRLTKEQKRLKLSVQEVADLLDLSSYFFELAVDEKVDFKFYDLPE KVKKNLHYAGFDIFYLMTGEYSGSEPALKIASFEYSIKDMSPEEKNEVRVLIENIPITKP H >gi|299856442|gb|ADWV01000009.1| GENE 136 134533 - 135156 214 207 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300817441|ref|ZP_07097658.1| ## NR: gi|300817441|ref|ZP_07097658.1| hypothetical protein HMPREF9345_02502 [Escherichia coli MS 107-1] # 1 207 1 207 207 396 100.0 1e-109 MALSSVAIVAGVATLAASLFKNTELRVIDIVELSKLSVNDIENNPQLKIVKNDINEHITG IKDPAFHEVLIEIMAKHNKPVGYFKKVDGRLQYDHSYYISINKMGWGQYIKKLINNPNDW VATLIYVIFIITMFGIAVDLDKDPQTFNQGLSIFLSGMGGLMFSFLLKGLSVQWRNSFHN VKDFEYKELFKEYANSKIDEIISSNSK >gi|299856442|gb|ADWV01000009.1| GENE 137 135260 - 135592 305 110 aa, chain - ## HITS:1 COG:ECs2888 KEGG:ns NR:ns ## COG: ECs2888 COG3422 # Protein_GI_number: 15832142 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 110 14 123 123 140 72.0 6e-34 MAGWFELDKSSNEQYKFVLKAGNGEIILTSELYTTKSSAENGIISVQANSPLDERYDLKD SSNGKSYFNLRAANHHVIGTSQMYSTKQSREKGIASVKTNGTTTTIKDNT >gi|299856442|gb|ADWV01000009.1| GENE 138 136371 - 137729 457 452 aa, chain + ## HITS:1 COG:alr3406 KEGG:ns NR:ns ## COG: alr3406 COG1106 # Protein_GI_number: 17230898 # Func_class: R General function prediction only # Function: Predicted ATPases # Organism: Nostoc sp. PCC 7120 # 1 437 1 443 463 269 37.0 1e-71 MLIRFSVENYKSFRDRVEFSMVSSKVRSHPSHVVKATSANDISVLKVGVIYGANASGKSN IIKAMKHAQNMILKGSKAGTNLPYAPFRLDDDFEKKPSRFEFEIKINGKNYAYGFSADQK SIKEEWLYEINKKDDILIYERSNTTHFKFENIKFKNEEDEQFLNFTARGTSENSLFLYEC FDRNVLKDLNYIVPISDVFKWFKAKLQIVFPNSKYRDLDFGSASDEKEGELITDILKDFD TGVSKLVLRKVSSFDDIKLPPNFKDQIIEDLKSSKAVVISGPRNKRYKVELGEDGEITVF QLMTAHKDKNGDDVYFELNQESDGTQRLFDIIPGLVELMLKDKVYIIDEIDRSLHPKITK TFMKLFSMKTVGKDSQLIVTTHETGLLDFELIRRDEVWFTEKNKSGISRIYSLEEFQPRF DKDIRKGYLVGRFGGIPKIKNILSNVEDFQKD >gi|299856442|gb|ADWV01000009.1| GENE 139 137732 - 138388 180 218 aa, chain + ## HITS:1 COG:no KEGG:alr3407 NR:ns ## KEGG: alr3407 # Name: not_defined # Def: hypothetical protein # Organism: Anabaena # Pathway: not_defined # 8 216 10 201 201 127 35.0 2e-28 MPRERREFDRRSGVKDPSLIVIACEGEKTEQDYFNSISELCDELGSRLQLKVLPPREEGH SAPRHVLDQMDKYKKEFGIKVNDELCLVIDRDKQSWTEATISEVAQFCHAKQYILALSNP CFELWLLIHHYDVMLLGEDEKRSILRNKNGYMKSKLRDVIGQYNPSSINIHDFWGVTEIA IDRAKRLDVNPAERWPNEIGSRVYIIMEKIRQSINNQL >gi|299856442|gb|ADWV01000009.1| GENE 140 138803 - 139990 385 395 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 10 380 43 406 406 152 29 7e-36 MHLLVHPTGSKYWRLQYRFSGKQKMLALGVYPEVSLAEARRRREEARQLIANNVDPGEKR KTEKIEEKGLLIFETVARDWHSSNRTWSDSHRTTVLNSLITHVFPVIGKRNISELKTRDL LVPLKKAEETGHLELAARLQQRITAIMRYAVHNALIDQNPAYDLAGAVTTAKSNHRPALP LERLPELLKRIDAYKGKGITQIAVQLTLLTFIRSSELRFARWSEVNFKNSLWTIPAERRE LEGVKYSNRGSKMKTPHLVPLSKQAVVLFKRLQAISGEKDLMFIGFSRDDKPISENTVNK ALRTMGYDTKAEVCGHGFRTMACSALIESGLWSRDAVERQMSHQERNSIRAAYIHKAEHL EERKLMLQWWADYLNANRKEHITPFEFAQRIKKMN >gi|299856442|gb|ADWV01000009.1| GENE 141 140392 - 141324 952 310 aa, chain - ## HITS:1 COG:ECs3230 KEGG:ns NR:ns ## COG: ECs3230 COG2116 # Protein_GI_number: 15832484 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 594 100.0 1e-170 MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHIRQDGEKELERDAMALL WSAIAAGLSMGASLLAKGIFHVELEGVPGSFLLENLGYTFGFIIVIMARQQLFTENTVTA VLPVMQKPTMSNVGLLMRLWGVVLLGNILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVM KNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIILMTWLIALGDTTHIVVGSVEILY LVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKAEARQKAERAE NIKKNDKNPA >gi|299856442|gb|ADWV01000009.1| GENE 142 141618 - 142373 898 251 aa, chain + ## HITS:1 COG:ECs3229 KEGG:ns NR:ns ## COG: ECs3229 COG2853 # Protein_GI_number: 15832483 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 514 100.0 1e-146 MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNFNVLDPYIVRPVAVAWR DYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNTILGMGGFIDVAGM ANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRDDGGDMADGLYPVLSWLTWPM SVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYFQRHDFIANGGELKPQENPNAQA IQDDLKDIDSE >gi|299856442|gb|ADWV01000009.1| GENE 143 142555 - 143613 390 352 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_2422 NR:ns ## KEGG: ECIAI1_2422 # Name: yfdF # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 352 1 352 352 634 100.0 1e-180 MLPSISINNTSATYPESINENNNDEVNGLVQELKNLFNGKEGISTCIKHLLELIKNAIRV NDDPYRFNINNSSVTYIDIGSNDTDHITIGIDNQEPIELPANYKDKELVRTIINDNIVEK THDINNKEMIFSALKEIYDGDPGFIFDKISHKLRHTVTEFDESGNSEPTDLFTWYGKDKK GDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRINGDSLTQYCSENARSASAWFESSKA IMAESFATGSDHQVVNELNGERLREPNEVFKRLGRAIRYNFQVDDAKFRRDNVKEIISTL FANKVDVDHPENKYKDFKDLEDKVEKRLQNRQTEYQNEINQLSAPGVNFDDI >gi|299856442|gb|ADWV01000009.1| GENE 144 143979 - 145319 1435 446 aa, chain - ## HITS:1 COG:ECs3227 KEGG:ns NR:ns ## COG: ECs3227 COG2067 # Protein_GI_number: 15832481 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Escherichia coli O157:H7 # 1 446 3 448 448 836 99.0 0 MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSGEGAIADDAGNVSRNPA LITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTAWVPNMHFVAPINDQFGWG ASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYRLNNAWSFGLGFNAVYARAKI ERFAGDLGQLVAGQIMQSPAGQTPQGQALAATANGIDSNTKIAHLNGNQWGFGWNAGILY ELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYGLPIPTATGGATQSGYLTLNLPEMW EVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATSTSGDTLFQKHEGFKDAYRIALGTTYYY DDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTYAFNKDASVDVGVSYMHGQSV KINEGPYQFESEGKAWLFGTNFNYAF >gi|299856442|gb|ADWV01000009.1| GENE 145 145691 - 145975 400 94 aa, chain + ## HITS:1 COG:ECs3226 KEGG:ns NR:ns ## COG: ECs3226 COG3691 # Protein_GI_number: 15832480 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 94 9 102 102 161 100.0 2e-40 MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCK ISPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR >gi|299856442|gb|ADWV01000009.1| GENE 146 146155 - 147465 1383 436 aa, chain + ## HITS:1 COG:yfcY KEGG:ns NR:ns ## COG: yfcY COG0183 # Protein_GI_number: 16130275 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli K12 # 1 436 1 436 436 793 99.0 0 MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIE QLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRA GIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYST GLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVE DNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGY LRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSE RFAREVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVT ACAAGGLGAAMVLEAE >gi|299856442|gb|ADWV01000009.1| GENE 147 147465 - 149609 1774 714 aa, chain + ## HITS:1 COG:yfcX_2 KEGG:ns NR:ns ## COG: yfcX_2 COG1250 # Protein_GI_number: 16130274 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 308 714 1 407 407 785 98.0 0 MEMASVFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSA KPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELA LACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAL KLGLVDDVVPHSILLEVAVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKT QGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPS SDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQLEGKV RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG IDTGTKIIPVLEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPA IYPLIGAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLG GPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARGESFWKTTATDLQ >gi|299856442|gb|ADWV01000009.1| GENE 148 149827 - 150297 419 156 aa, chain + ## HITS:1 COG:sixA KEGG:ns NR:ns ## COG: sixA COG2062 # Protein_GI_number: 16130273 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Escherichia coli K12 # 1 156 6 161 161 303 100.0 9e-83 MRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGD CLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETP PMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKAI >gi|299856442|gb|ADWV01000009.1| GENE 149 150972 - 151535 680 187 aa, chain + ## HITS:1 COG:yfcV KEGG:ns NR:ns ## COG: yfcV COG3539 # Protein_GI_number: 16130272 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 187 1 187 187 296 98.0 2e-80 MSKFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIG AEKLKNNGTTTPKSFQIRLQDCVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNN VSLAIGDSLGTSYKSGMGIDQKIVKDTSTNKGKAKQTLNFKAWLVGAADAPDLGNFEANT TFQITYL >gi|299856442|gb|ADWV01000009.1| GENE 150 151617 - 154259 2510 880 aa, chain + ## HITS:1 COG:yfcUm KEGG:ns NR:ns ## COG: yfcUm COG3188 # Protein_GI_number: 16132272 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 880 1 881 881 1701 97.0 0 MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVE PGKYNLQVQLNKQPLAEEYDIYWYAGEDDASKSYACLTPELVAQFGLKEDVAKNLQWSHD AKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWDPPSRWDDGISGIVADYSINA QTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDEFSGDETQKKWEW SRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVA HTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASMP YLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIANGWSLYGGALGDENYQSAALG VGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYRF SEENFMTMSEYLDASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQT NYNIMLSHYFNMGSIRNVSISMTGYRYEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSG TDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDGSLAQVDLSANYHEGQYTSAGL SLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNN YYRNQAYIDLNKLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLQDGSHPPF GAEVKNDNEQTVGLVDDDGNVYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLL PCQHKGNVAPVVPDDIKPVIQEQTQQVTPTNPPVSVSANQ >gi|299856442|gb|ADWV01000009.1| GENE 151 154279 - 155031 459 250 aa, chain + ## HITS:1 COG:ECs3220 KEGG:ns NR:ns ## COG: ECs3220 COG3121 # Protein_GI_number: 15832474 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 # 1 250 1 250 252 416 86.0 1e-116 MSDLLCSAKLGATTLALLLSAASLSAQASVTPDRTRLIFNESDKSISVTLRNNDPKLPYL AQSWIEDEKGNKISSPLTVLPPVQRIDSMMNGQVKVQGMPDINKLPADRESLFYFNVREI PPKTNKANTLQIALQTRIKLFWRPKALENVSMKNPWQYKVTLTRNGQEFTVNNPTPYYVI FSNASTQKNGNPAAGFSPIVMSPKTSAPLNVKMGSVPVLTYVNDYGARMPLFFTCNGNSC QVDEEQSRKG >gi|299856442|gb|ADWV01000009.1| GENE 152 155141 - 155554 187 137 aa, chain + ## HITS:1 COG:Z3598 KEGG:ns NR:ns ## COG: Z3598 COG3539 # Protein_GI_number: 15802882 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 EDL933 # 1 137 61 197 197 228 83.0 3e-60 MNLRVLVDAPPPCTVNGAAVEFGNVFINKINGVDYKRPIDYSLVCNNLAMDDLRLQMQAT TVVINGETVISTGIPGFGIRVQKSSDHTILDLTSGSWLPFNFSSGVPVLEAVPVKQSGTT LAAAEFNASATIVVDYQ >gi|299856442|gb|ADWV01000009.1| GENE 153 155551 - 156021 221 156 aa, chain + ## HITS:1 COG:ECs3218 KEGG:ns NR:ns ## COG: ECs3218 COG3539 # Protein_GI_number: 15832472 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 253 79.0 1e-67 MKRISLILLWGFCSMALSNVSFHGYLVQPPNCTISNAQTIEITFQDVLIDDINGSNYEQT VPYSITCDTAVRDPLMEMTLSWSGTPSDFDNAAVSSNITGLGIQLKQAGQSFTINTPLVV NETDLPVLTAVPVKKSGVVLPEADFEAWATLQVDYQ >gi|299856442|gb|ADWV01000009.1| GENE 154 156018 - 156542 160 174 aa, chain + ## HITS:1 COG:ECs3217 KEGG:ns NR:ns ## COG: ECs3217 COG3539 # Protein_GI_number: 15832471 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 174 10 182 182 229 71.0 2e-60 MKKKRTLFFISSLMLLGSGTTIAGDNLHFTGNLISKSCTPVINGSQLAEVHFPAIAASDL MNLGQSERVPLVFQLKDCHSSTSFNVKVTLTGTEDSALPGFLAFDSSSSASGAGIGIETA AGTSVPINNTTGVTLPLNQGNNSLNFNTWLQAKSGRDVTSGDFSAIVTATFEYF >gi|299856442|gb|ADWV01000009.1| GENE 155 156904 - 157401 206 165 aa, chain + ## HITS:1 COG:no KEGG:SF2408 NR:ns ## KEGG: SF2408 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri # Pathway: not_defined # 1 165 126 290 296 318 100.0 5e-86 MTFKITVASDDYGCPWIASFYSYTDLPGFGSYTAPTVHNTICPTIPVASYDISWSENYVS HNKALRIQSTGSTVTTTLSTYLMEGGRLCDGSNFSDNDGRGAYCRAVSELLTFTSYGCDK STVTVTPTRHPVTDKVLHDIVVNVNTSSGQPIDSTCRFQYVLNEL >gi|299856442|gb|ADWV01000009.1| GENE 156 157523 - 158074 580 183 aa, chain - ## HITS:1 COG:yfcN KEGG:ns NR:ns ## COG: yfcN COG2840 # Protein_GI_number: 16130266 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 183 1 183 183 349 100.0 2e-96 MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSD EFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACR REHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPP ELP >gi|299856442|gb|ADWV01000009.1| GENE 157 158240 - 159172 1632 310 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|89109150|ref|AP_002930.1| N5-glutamine methyltransferase [Escherichia coli str. K-12 substr. W3110] # 1 310 1 310 310 633 99 1e-180 MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDEAVQLVLPSLYLPLDIP EDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGEL INNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHG LIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKL TRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDVPFTWLEFDNGGDGVFMLTKEQLLA AREHFAIYKD >gi|299856442|gb|ADWV01000009.1| GENE 158 159207 - 160292 1249 361 aa, chain + ## HITS:1 COG:ECs3213 KEGG:ns NR:ns ## COG: ECs3213 COG0082 # Protein_GI_number: 15832467 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Escherichia coli O157:H7 # 1 361 1 361 361 697 100.0 0 MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRR EPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDY RGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMGDIPLEIKDWSQVEQNPFFC PDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAV KGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGILGGISSGQQIIAHMALKPTSSITV PGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPR W >gi|299856442|gb|ADWV01000009.1| GENE 159 160296 - 161120 544 274 aa, chain + ## HITS:1 COG:mepA KEGG:ns NR:ns ## COG: mepA COG3770 # Protein_GI_number: 16130263 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein endopeptidase # Organism: Escherichia coli K12 # 1 274 1 274 274 513 98.0 1e-145 MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQV MRTDLRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVD IFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVPTLWKPEIFSLIKLAAQDKDVTRIFVNP AIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPPGDGCGAELQ SWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI >gi|299856442|gb|ADWV01000009.1| GENE 160 161120 - 161929 899 269 aa, chain + ## HITS:1 COG:ECs3211 KEGG:ns NR:ns ## COG: ECs3211 COG0730 # Protein_GI_number: 15832465 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 450 100.0 1e-126 METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQ ACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICI GLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLA KATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP MIVIVSAVMSAKLLYDSHGQEILHWLGMN >gi|299856442|gb|ADWV01000009.1| GENE 161 161929 - 162477 570 182 aa, chain + ## HITS:1 COG:yfcM KEGG:ns NR:ns ## COG: yfcM COG3101 # Protein_GI_number: 16130261 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 182 1 182 182 373 98.0 1e-103 MNSTHHYEQLIEIFNSCFADEFNTRLIKGDDEPIYLPADAEVPYNRIVFAHGFYASAIHE ISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQAFDWLFCVAAGYPFNVSC DNLEGDFEPDRVVFQRRVHAQVMDYLANGIPERPARFIKALQNYYHTPELTAEQFPWPEA LN >gi|299856442|gb|ADWV01000009.1| GENE 162 162511 - 162789 403 92 aa, chain + ## HITS:1 COG:no KEGG:ECB_02250 NR:ns ## KEGG: ECB_02250 # Name: yfcL # Def: hypothetical protein # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 92 1 92 92 154 100.0 1e-36 MIAEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQS LEKAIGAGELSPRDQALVTDMWENLFQQASQQ >gi|299856442|gb|ADWV01000009.1| GENE 163 162810 - 162974 57 54 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E1227 NR:ns ## KEGG: SbBS512_E1227 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 11 54 183 226 226 85 95.0 5e-16 MPDATLIASYQALYYPSSAEKIGQFSLPAVRMPYRALGSNLLRRFMQRTAFLPK Prediction of potential genes in microbial genomes Time: Sun May 15 15:27:08 2011 Seq name: gi|299856441|gb|ADWV01000010.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont9.1, whole genome shotgun sequence Length of sequence - 148914 bp Number of predicted genes - 141, with homology - 141 Number of transcription units - 71, operones - 36 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 21 - 96 88.7 # Thr GGT 0 0 + 5S_RRNA 135 - 256 100.0 # AE006468 [R:3566622..3566743] # 5S ribosomal RNA # Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella; Salmonella enterica subsp. enterica serovar Typhimurium. - Term 424 - 455 4.1 1 1 Op 1 34/0.000 - CDS 565 - 1239 456 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 2 1 Op 2 6/0.167 - CDS 1247 - 2350 832 ## COG0765 ABC-type amino acid transport system, permease component 3 1 Op 3 6/0.167 - CDS 2360 - 3541 813 ## COG4597 ABC-type amino acid transport system, permease component - Term 3551 - 3601 5.2 4 1 Op 4 . - CDS 3609 - 4634 1010 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 4678 - 4737 2.2 - Term 5024 - 5059 5.6 5 2 Tu 1 . - CDS 5065 - 5286 279 ## ECH74115_4585 putative lipoprotein - Prom 5463 - 5522 4.7 - Term 5493 - 5528 3.5 6 3 Op 1 27/0.000 - CDS 5539 - 8643 3026 ## COG0841 Cation/multidrug efflux pump 7 3 Op 2 . - CDS 8655 - 9812 845 ## COG0845 Membrane-fusion protein + Prom 10036 - 10095 7.9 8 4 Tu 1 . + CDS 10211 - 10873 417 ## COG1309 Transcriptional regulator + Term 10907 - 10948 2.3 - Term 10826 - 10862 0.1 9 5 Op 1 . - CDS 10876 - 11055 134 ## EcE24377A_3748 hypothetical protein - Prom 11075 - 11134 1.9 10 5 Op 2 1/0.967 - CDS 11139 - 12023 771 ## COG0863 DNA modification methylase - Term 12042 - 12079 1.4 11 6 Op 1 12/0.067 - CDS 12109 - 12405 396 ## COG2901 Factor for inversion stimulation Fis, transcriptional activator 12 6 Op 2 7/0.167 - CDS 12431 - 13396 1100 ## PROTEIN SUPPORTED gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase - Prom 13544 - 13603 5.5 - Term 13617 - 13671 11.8 13 7 Op 1 3/0.900 - CDS 13725 - 14606 1539 ## PROTEIN SUPPORTED gi|15833385|ref|NP_312158.1| ribosomal protein L11 methyltransferase 14 7 Op 2 4/0.567 - CDS 14618 - 16069 1547 ## COG4145 Na+/panthothenate symporter 15 7 Op 3 6/0.167 - CDS 16059 - 16301 296 ## COG3924 Predicted membrane protein - Prom 16326 - 16385 5.4 - Term 16362 - 16390 3.0 16 8 Op 1 27/0.000 - CDS 16410 - 17759 1524 ## COG0439 Biotin carboxylase 17 8 Op 2 . - CDS 17770 - 18240 467 ## COG0511 Biotin carboxyl carrier protein 18 9 Op 1 . - CDS 19017 - 19181 71 ## EcolC_0453 hypothetical protein 19 9 Op 2 . - CDS 19218 - 20192 1182 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 20230 - 20289 3.4 + Prom 20193 - 20252 3.7 20 10 Tu 1 . + CDS 20344 - 22284 1212 ## COG2200 FOG: EAL domain + Prom 22490 - 22549 4.9 21 11 Op 1 22/0.000 + CDS 22589 - 23632 1139 ## COG1077 Actin-like ATPase involved in cell morphogenesis 22 11 Op 2 19/0.000 + CDS 23698 - 24801 1166 ## COG1792 Cell shape-determining protein 23 11 Op 3 7/0.167 + CDS 24801 - 25289 445 ## COG2891 Cell shape-determining protein 24 11 Op 4 8/0.133 + CDS 25298 - 25891 632 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 25 11 Op 5 5/0.333 + CDS 25881 - 27350 1673 ## COG1530 Ribonucleases G and E 26 11 Op 6 3/0.900 + CDS 27418 - 31218 3269 ## COG3164 Predicted membrane protein + Prom 31236 - 31295 4.0 27 12 Tu 1 . + CDS 31374 - 32819 1819 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs 28 13 Tu 1 . - CDS 32947 - 33876 869 ## COG0583 Transcriptional regulator - Prom 33917 - 33976 7.2 + Prom 33893 - 33952 5.5 29 14 Op 1 . + CDS 34059 - 34262 138 ## G2583_3962 hypothetical protein 30 14 Op 2 6/0.167 + CDS 34270 - 35202 983 ## COG1566 Multidrug resistance efflux pump 31 14 Op 3 4/0.567 + CDS 35208 - 37175 1344 ## COG1289 Predicted membrane protein + Term 37183 - 37215 3.0 32 15 Tu 1 . + CDS 37267 - 37539 370 ## COG2732 Barstar, RNAse (barnase) inhibitor - Term 37537 - 37567 4.1 33 16 Tu 1 . - CDS 37595 - 37858 334 ## G2583_3958 hypothetical protein - Prom 37988 - 38047 8.4 - Term 38179 - 38218 4.7 34 17 Tu 1 . - CDS 38223 - 38693 586 ## COG1438 Arginine repressor - Prom 38719 - 38778 5.2 + Prom 38865 - 38924 4.3 35 18 Tu 1 . + CDS 39128 - 40066 1363 ## COG0039 Malate/lactate dehydrogenases + Term 40082 - 40125 8.6 - Term 40077 - 40106 1.2 36 19 Op 1 6/0.167 - CDS 40129 - 41196 1198 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 41223 - 41282 4.0 37 19 Op 2 5/0.333 - CDS 41286 - 42653 1460 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 42698 - 42757 4.2 - Term 42764 - 42796 3.8 38 20 Tu 1 . - CDS 42807 - 43205 548 ## COG3105 Uncharacterized protein conserved in bacteria - Prom 43319 - 43378 3.3 + Prom 43450 - 43509 2.2 39 21 Tu 1 . + CDS 43555 - 44526 821 ## COG1485 Predicted ATPase + Term 44549 - 44581 3.1 + Prom 44529 - 44588 5.6 40 22 Op 1 59/0.000 + CDS 44670 - 45173 881 ## PROTEIN SUPPORTED gi|226956764|ref|YP_002807559.1| 50S ribosomal subunit protein L13 41 22 Op 2 6/0.167 + CDS 45189 - 45581 650 ## PROTEIN SUPPORTED gi|15803764|ref|NP_289798.1| 30S ribosomal protein S9 + Term 45608 - 45661 3.4 42 23 Op 1 13/0.033 + CDS 45976 - 46614 663 ## PROTEIN SUPPORTED gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase 43 23 Op 2 . + CDS 46620 - 47117 455 ## COG2969 Stringent starvation protein B + Term 47120 - 47159 5.0 - Term 47108 - 47147 5.0 44 24 Tu 1 . - CDS 47160 - 48527 1211 ## COG3069 C4-dicarboxylate transporter - Prom 48630 - 48689 5.7 + Prom 48663 - 48722 6.7 45 25 Tu 1 . + CDS 48907 - 49698 960 ## COG2186 Transcriptional regulators + Prom 49726 - 49785 3.7 46 26 Tu 1 . + CDS 49820 - 50713 1079 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase + Prom 50718 - 50777 2.9 47 27 Op 1 1/0.967 + CDS 50822 - 52312 1624 ## COG0477 Permeases of the major facilitator superfamily + Term 52320 - 52351 2.4 48 27 Op 2 5/0.333 + CDS 52360 - 53049 750 ## COG3010 Putative N-acetylmannosamine-6-phosphate epimerase 49 27 Op 3 3/0.900 + CDS 53046 - 53921 324 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 50 27 Op 4 . + CDS 53918 - 54382 379 ## COG2731 Beta-galactosidase, beta subunit - Term 54392 - 54424 4.9 51 28 Tu 1 . - CDS 54442 - 55569 571 ## PROTEIN SUPPORTED gi|167855185|ref|ZP_02477956.1| 50S ribosomal protein L31 - Prom 55667 - 55726 2.3 - Term 55697 - 55743 6.1 52 29 Op 1 21/0.000 - CDS 55753 - 57171 1628 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 53 29 Op 2 . - CDS 57184 - 61644 4870 ## COG0069 Glutamate synthase domain 2 54 30 Op 1 4/0.567 + CDS 62319 - 63248 898 ## COG1242 Predicted Fe-S oxidoreductase + Prom 63261 - 63320 3.4 55 30 Op 2 2/0.933 + CDS 63344 - 65680 2740 ## COG0642 Signal transduction histidine kinase + Prom 65797 - 65856 3.7 56 31 Op 1 3/0.900 + CDS 65910 - 66563 779 ## COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 57 31 Op 2 . + CDS 66617 - 67288 460 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Term 67482 - 67522 3.7 58 32 Tu 1 . - CDS 67285 - 67917 466 ## EC55989_3625 hypothetical protein - Prom 68028 - 68087 2.6 59 33 Op 1 7/0.167 - CDS 68131 - 68403 276 ## COG1925 Phosphotransferase system, HPr-related proteins 60 33 Op 2 8/0.133 - CDS 68400 - 69254 839 ## COG1660 Predicted P-loop-containing kinase 61 33 Op 3 11/0.100 - CDS 69300 - 69791 406 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Term 69843 - 69880 8.2 62 34 Op 1 11/0.100 - CDS 69909 - 70196 462 ## PROTEIN SUPPORTED gi|227335124|ref|ZP_03838780.1| hypothetical protein CIT292_04930 63 34 Op 2 17/0.000 - CDS 70219 - 71652 1382 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 64 34 Op 3 19/0.000 - CDS 71700 - 72425 287 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 65 34 Op 4 12/0.067 - CDS 72432 - 72989 548 ## COG1934 Uncharacterized protein conserved in bacteria 66 34 Op 5 11/0.100 - CDS 72958 - 73533 415 ## COG3117 Uncharacterized protein conserved in bacteria 67 34 Op 6 13/0.033 - CDS 73530 - 74096 746 ## COG1778 Low specificity phosphatase (HAD superfamily) 68 34 Op 7 6/0.167 - CDS 74117 - 75103 926 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 69 34 Op 8 . - CDS 75117 - 76094 724 ## COG0530 Ca2+/Na+ antiporter - Prom 76157 - 76216 5.5 + Prom 76177 - 76236 4.4 70 35 Op 1 23/0.000 + CDS 76304 - 77113 581 ## COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component 71 35 Op 2 16/0.000 + CDS 77121 - 77903 812 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 72 35 Op 3 13/0.033 + CDS 77908 - 78459 616 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 73 35 Op 4 10/0.133 + CDS 78478 - 79113 937 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component 74 35 Op 5 6/0.167 + CDS 79113 - 79406 363 ## COG3113 Predicted NTP binding protein (contains STAS domain) + Term 79457 - 79509 6.0 + Prom 79446 - 79505 1.6 75 36 Op 1 11/0.100 + CDS 79551 - 79820 322 ## COG5007 Predicted transcriptional regulator, BolA superfamily 76 36 Op 2 . + CDS 79875 - 81134 1512 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 77 37 Tu 1 . - CDS 81182 - 81460 299 ## COG3423 Predicted transcriptional regulator - Prom 81571 - 81630 3.0 78 38 Tu 1 . - CDS 81689 - 82660 1095 ## COG0142 Geranylgeranyl pyrophosphate synthase - Prom 82734 - 82793 3.2 + Prom 82794 - 82853 3.6 79 39 Op 1 32/0.000 + CDS 82895 - 83230 562 ## PROTEIN SUPPORTED gi|224585100|ref|YP_002638899.1| 50S ribosomal protein L21 80 39 Op 2 6/0.167 + CDS 83251 - 83508 437 ## PROTEIN SUPPORTED gi|15803725|ref|NP_289759.1| 50S ribosomal protein L27 + Term 83537 - 83570 6.1 + Prom 83533 - 83592 3.6 81 40 Op 1 6/0.167 + CDS 83635 - 84600 751 ## PROTEIN SUPPORTED gi|46133178|ref|ZP_00156740.2| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily 82 40 Op 2 . + CDS 84616 - 85788 1548 ## COG0536 Predicted GTPase + Term 85792 - 85834 4.0 - Term 85786 - 85816 3.3 83 41 Tu 1 . - CDS 85828 - 87147 900 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) - Prom 87364 - 87423 3.2 + Prom 87303 - 87362 5.7 84 42 Tu 1 . + CDS 87509 - 87985 604 ## COG0782 Transcription elongation factor + Term 88034 - 88060 1.7 - Term 88016 - 88055 7.4 85 43 Tu 1 . - CDS 88141 - 88434 454 ## PROTEIN SUPPORTED gi|188532496|ref|YP_001906293.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein - Prom 88602 - 88661 3.0 + Prom 88423 - 88482 4.2 86 44 Op 1 13/0.033 + CDS 88560 - 89189 575 ## COG0293 23S rRNA methylase + Prom 89191 - 89250 4.2 87 44 Op 2 7/0.167 + CDS 89280 - 91223 1683 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 91254 - 91295 9.5 88 45 Op 1 9/0.133 + CDS 91313 - 92161 844 ## COG0294 Dihydropteroate synthase and related enzymes 89 45 Op 2 7/0.167 + CDS 92154 - 93491 1588 ## COG1109 Phosphomannomutase + Term 93515 - 93542 -0.1 + Prom 93532 - 93591 4.0 90 46 Tu 1 . + CDS 93719 - 94051 390 ## COG1314 Preprotein translocase subunit SecG + Term 94160 - 94202 9.2 + TRNA 94066 - 94152 70.3 # Leu GAG 0 0 + Prom 94510 - 94569 7.1 91 47 Tu 1 . + CDS 94611 - 96236 448 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Term 96195 - 96236 5.7 92 48 Tu 1 . - CDS 96244 - 97587 1782 ## COG0137 Argininosuccinate synthase - Prom 97647 - 97706 3.8 + TRNA 97935 - 98011 86.1 # Met CAT 0 0 93 49 Op 1 32/0.000 + CDS 98248 - 98670 355 ## COG0779 Uncharacterized protein conserved in bacteria 94 49 Op 2 20/0.000 + CDS 98698 - 100185 1026 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 95 49 Op 3 32/0.000 + CDS 100210 - 102882 3172 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) + Term 103009 - 103035 1.0 + Prom 102950 - 103009 2.3 96 49 Op 4 26/0.000 + CDS 103046 - 103447 624 ## COG0858 Ribosome-binding factor A 97 49 Op 5 14/0.033 + CDS 103447 - 104391 1092 ## COG0130 Pseudouridine synthase + Term 104484 - 104522 -0.8 + Prom 104404 - 104463 4.1 98 50 Op 1 26/0.000 + CDS 104540 - 104809 445 ## PROTEIN SUPPORTED gi|16131057|ref|NP_417634.1| 30S ribosomal subunit protein S15 + Term 104831 - 104859 1.3 99 50 Op 2 6/0.167 + CDS 105056 - 107191 188 ## PROTEIN SUPPORTED gi|229537485|ref|ZP_04426621.1| ribosomal protein S1 + Term 107203 - 107236 5.9 100 51 Tu 1 . + CDS 107300 - 108184 624 ## COG4785 Lipoprotein NlpI, contains TPR repeats + Term 108220 - 108256 1.3 + Prom 108279 - 108338 5.7 101 52 Tu 1 . + CDS 108364 - 110253 2450 ## COG0513 Superfamily II DNA and RNA helicases + Term 110297 - 110331 3.5 + Prom 110261 - 110320 7.9 102 53 Tu 1 . + CDS 110407 - 111651 1505 ## COG0814 Amino acid permeases - Term 111680 - 111715 0.2 103 54 Tu 1 . - CDS 111769 - 112776 1006 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - Prom 112808 - 112867 5.7 104 55 Op 1 13/0.033 - CDS 112982 - 113860 956 ## COG0826 Collagenase and related proteases 105 55 Op 2 . - CDS 113869 - 114864 932 ## COG0826 Collagenase and related proteases - Prom 114894 - 114953 4.4 + Prom 114973 - 115032 4.4 106 56 Op 1 6/0.167 + CDS 115073 - 115597 725 ## COG3154 Putative lipid carrier protein 107 56 Op 2 . + CDS 115591 - 116094 709 ## COG3153 Predicted acetyltransferase + Term 116146 - 116188 1.1 108 57 Tu 1 . - CDS 116081 - 116383 272 ## COG2827 Predicted endonuclease containing a URI domain - Prom 116408 - 116467 4.2 + Prom 116353 - 116412 3.1 109 58 Tu 1 . + CDS 116434 - 116877 390 ## COG3787 Uncharacterized protein conserved in bacteria + Term 116915 - 116943 1.4 - Term 116573 - 116619 1.1 110 59 Tu 1 . - CDS 116857 - 117375 594 ## COG0693 Putative intracellular protease/amidase + Prom 117274 - 117333 2.1 111 60 Op 1 2/0.933 + CDS 117503 - 118138 582 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases + Term 118152 - 118204 3.2 112 60 Op 2 . + CDS 118211 - 119251 1308 ## COG0701 Predicted permeases + Term 119267 - 119314 -0.1 - Term 119255 - 119294 -0.3 113 61 Op 1 11/0.100 - CDS 119365 - 119940 629 ## COG2823 Predicted periplasmic or secreted lipoprotein 114 61 Op 2 11/0.100 - CDS 119950 - 120540 457 ## COG0279 Phosphoheptose isomerase 115 61 Op 3 10/0.133 - CDS 120560 - 120955 181 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 116 61 Op 4 . - CDS 120913 - 122949 1855 ## COG3107 Putative lipoprotein - Prom 123137 - 123196 2.7 + Prom 122917 - 122976 6.5 117 62 Tu 1 . + CDS 123014 - 123874 996 ## COG0313 Predicted methyltransferases + Term 123882 - 123926 8.1 - Term 123787 - 123813 -0.3 118 63 Op 1 6/0.167 - CDS 123917 - 125008 528 ## COG3539 P pilus assembly protein, pilin FimA 119 63 Op 2 10/0.133 - CDS 125019 - 127535 1528 ## COG3188 P pilus assembly protein, porin PapC 120 63 Op 3 7/0.167 - CDS 127565 - 128227 310 ## COG3121 P pilus assembly protein, chaperone PapD - Prom 128268 - 128327 1.9 - Term 128292 - 128331 9.3 121 64 Tu 1 2/0.933 - CDS 128340 - 128924 428 ## COG3539 P pilus assembly protein, pilin FimA - Prom 129057 - 129116 8.8 - Term 129195 - 129246 7.3 122 65 Op 1 2/0.933 - CDS 129324 - 130025 625 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase - Term 130036 - 130072 7.1 123 65 Op 2 13/0.033 - CDS 130080 - 130871 889 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 124 65 Op 3 13/0.033 - CDS 130861 - 131664 798 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 125 65 Op 4 3/0.900 - CDS 131703 - 132179 607 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 132203 - 132262 4.4 126 66 Op 1 3/0.900 - CDS 132346 - 133206 854 ## COG0191 Fructose/tagatose bisphosphate aldolase 127 66 Op 2 9/0.133 - CDS 133219 - 134373 989 ## COG2222 Predicted phosphosugar isomerases - Prom 134462 - 134521 6.1 - Term 134670 - 134705 -0.0 128 67 Op 1 3/0.900 - CDS 134724 - 135857 1006 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase 129 67 Op 2 4/0.567 - CDS 135854 - 136288 560 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 130 67 Op 3 13/0.033 - CDS 136306 - 137184 1127 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 131 67 Op 4 13/0.033 - CDS 137174 - 137953 1057 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 132 67 Op 5 1/0.967 - CDS 137964 - 138437 593 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 133 67 Op 6 . - CDS 138460 - 139740 1358 ## COG4573 Predicted tagatose 6-phosphate kinase - Prom 139824 - 139883 6.0 + Prom 139769 - 139828 6.0 134 68 Tu 1 . + CDS 139989 - 140798 732 ## COG1349 Transcriptional regulators of sugar metabolism + Term 140858 - 140921 2.1 - Term 140675 - 140717 2.1 135 69 Op 1 . - CDS 140853 - 141317 218 ## ECSE_3414 hypothetical protein 136 69 Op 2 3/0.900 - CDS 141317 - 141652 237 ## COG2002 Regulators of stationary/sporulation gene expression - Prom 141681 - 141740 7.6 - Term 141740 - 141780 2.5 137 70 Tu 1 . - CDS 141801 - 143372 1393 ## COG2721 Altronate dehydratase - Prom 143392 - 143451 3.1 + Prom 143596 - 143655 6.5 138 71 Op 1 6/0.167 + CDS 143747 - 145081 1676 ## COG0477 Permeases of the major facilitator superfamily 139 71 Op 2 1/0.967 + CDS 145097 - 145867 844 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 140 71 Op 3 1/0.967 + CDS 145897 - 146787 1194 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 141 71 Op 4 . + CDS 146884 - 148029 1067 ## COG1929 Glycerate kinase Predicted protein(s) >gi|299856441|gb|ADWV01000010.1| GENE 1 565 - 1239 456 224 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 12 223 1 215 245 180 45 4e-44 MSQILLQPANAMITLENVNKWYGQFHVLKNINLTVQPGERIVLCGPSGSGKSTTIRCINH LEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPHLTVLQNCTLAPIWVRKMP KKEAEALAMHYLERVRIAEHAHKFPGQISGGQQQRVAIARSLCMKPKIMLFDEPTSALDP EMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVILWIVGR >gi|299856441|gb|ADWV01000010.1| GENE 2 1247 - 2350 832 367 aa, chain - ## HITS:1 COG:ECs4143 KEGG:ns NR:ns ## COG: ECs4143 COG0765 # Protein_GI_number: 15833397 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 367 2 368 368 673 98.0 0 MTKVLLSQPSRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWAFLQA NWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILP HRGRYIAVWAVIYPLIVWWLMYGGFFGLERVETRQWGGLTLTLIIASVGIAGALPWGILL ALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTNIDKLIRALVGVIL FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF KDTSLVIIIGLFDLFSSVQQATVDPTWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRF NTGRTPH >gi|299856441|gb|ADWV01000010.1| GENE 3 2360 - 3541 813 393 aa, chain - ## HITS:1 COG:ECs4142 KEGG:ns NR:ns ## COG: ECs4142 COG4597 # Protein_GI_number: 15833396 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 393 7 399 399 698 99.0 0 MSHRRSTVKGSLSFANPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLD RGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLL RKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGD GFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALH WDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGL PNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAI ETIAMTMSVYLIISLTISLLMNIYNRRIAIVER >gi|299856441|gb|ADWV01000010.1| GENE 4 3609 - 4634 1010 341 aa, chain - ## HITS:1 COG:ECs4141 KEGG:ns NR:ns ## COG: ECs4141 COG0834 # Protein_GI_number: 15833395 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 37 341 1 305 305 617 99.0 1e-177 MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGI DVDVCRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFT GVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRS DESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPAVRRGDDEWFS IVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIK QVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR >gi|299856441|gb|ADWV01000010.1| GENE 5 5065 - 5286 279 73 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_4585 NR:ns ## KEGG: ECH74115_4585 # Name: not_defined # Def: putative lipoprotein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 73 1 73 73 115 100.0 6e-25 MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAA VAGLTMGIIALSK >gi|299856441|gb|ADWV01000010.1| GENE 6 5539 - 8643 3026 1034 aa, chain - ## HITS:1 COG:acrF KEGG:ns NR:ns ## COG: acrF COG0841 # Protein_GI_number: 16131154 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1034 1 1034 1034 1947 99.0 0 MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDT VTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQ EVQQQGISVEKSSSSYLMVAGFVSDNPDTTQDDISDYVASNVKDTLSRLNGVGDVQLFGA QYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRL KNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYNVIARINGKPAAGLGIKLATGANAL DTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQ NMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM MEDKLPPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL SVLVALILTPALCATLLKPTSAEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGRY LLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKN EKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERNSDENSAEAVIHRAKMELGKIRDG FVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGL EDTAQFKLEVDQEKAQALGVSLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFRM LPEDVDKLYVRSANGEMVPFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAM ALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSV MLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVV EATLMAVRMRLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFF VPVFFVVIRRCFKG >gi|299856441|gb|ADWV01000010.1| GENE 7 8655 - 9812 845 385 aa, chain - ## HITS:1 COG:acrE KEGG:ns NR:ns ## COG: acrE COG0845 # Protein_GI_number: 16131153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 1 385 1 385 385 674 100.0 0 MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIVKTAPLEVKTELPGRTN AYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQANYDSAKGELAKSEAAAAI AHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAKATVESARINLAYTKVTAPIS GRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLHKENAT SNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRARIDEGV QPDAILIPQQGVSRTPRGDATVLIVNDKSQVEARPVVASQAIGDKWLISEGLKSGDQVIV SGLQKARPGEQVKATTDTPADTASK >gi|299856441|gb|ADWV01000010.1| GENE 8 10211 - 10873 417 220 aa, chain + ## HITS:1 COG:ECs4136 KEGG:ns NR:ns ## COG: ECs4136 COG1309 # Protein_GI_number: 15833390 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 220 1 220 220 424 99.0 1e-119 MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVTRGAIYWHFENKTQLFN EMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAKIPRQQALLKILYHKCEFN DEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLDVVMIIINGAFSGIVQNWLMN MAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELSVM >gi|299856441|gb|ADWV01000010.1| GENE 9 10876 - 11055 134 59 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_3748 NR:ns ## KEGG: EcE24377A_3748 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 59 10 68 68 87 100.0 2e-16 MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM >gi|299856441|gb|ADWV01000010.1| GENE 10 11139 - 12023 771 294 aa, chain - ## HITS:1 COG:yhdJ KEGG:ns NR:ns ## COG: yhdJ COG0863 # Protein_GI_number: 16131150 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Escherichia coli K12 # 1 294 3 296 296 604 98.0 1e-173 MRTGCEPTRFGNEAKTIIHGDALAELKKIPAESDDLIFADPPYNIGKNFDGLIEAWKEDL FIDWLFEVIAECHRVLKKQGSMYIMNSTENMPFIDLQCRKLFTIKSRIVWSYDSSGVQAK KHYGSMYEPILMMVKDAKNYTFNGDAILVEAKTGSQRALIDYRKNPPQPYNHQKVPGNVW DFPRVRYLMDEYENHPTQKPEALLKRIILASSNPGDIVLDPFAGSFTTGAVAVSSGRKFI GIEINSEYIKMGLRRLDVASHYSAEELAKVKKRKTGNLSKRSRLSEVDPDLIAK >gi|299856441|gb|ADWV01000010.1| GENE 11 12109 - 12405 396 98 aa, chain - ## HITS:1 COG:ECs4133 KEGG:ns NR:ns ## COG: ECs4133 COG2901 # Protein_GI_number: 15833387 # Func_class: K Transcription; L Replication, recombination and repair # Function: Factor for inversion stimulation Fis, transcriptional activator # Organism: Escherichia coli O157:H7 # 1 98 1 98 98 162 100.0 1e-40 MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQ PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN >gi|299856441|gb|ADWV01000010.1| GENE 12 12431 - 13396 1100 321 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase [Haemophilus influenzae R2866] # 1 317 28 344 353 428 65 1e-119 MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVH IDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDV VKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRTRACLFNGE AEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHY LDTGEMLPPLPLAEVKRLLCAHVRELHDFYGPAKGYRIARKHVSWYLQEHAPNDQFRRTF NAIEDASEQLEALEAYFENFA >gi|299856441|gb|ADWV01000010.1| GENE 13 13725 - 14606 1539 293 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15833385|ref|NP_312158.1| ribosomal protein L11 methyltransferase [Escherichia coli O157:H7 str. Sakai] # 1 293 1 293 293 597 99 1e-169 MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPLPGETRLWGDTDVIGLF DAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWERKWMDNFHPMRFGERLWICPSWRD VPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGKTVIDFGCGSGILAIAALKLG AAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQPEEMKADVVVANILAGPLRELA PLISVLPVSGGLLGLSGILASQAESVCEAYADSFALDPVVEKEEWCRITGRKN >gi|299856441|gb|ADWV01000010.1| GENE 14 14618 - 16069 1547 483 aa, chain - ## HITS:1 COG:ECs4130 KEGG:ns NR:ns ## COG: ECs4130 COG4145 # Protein_GI_number: 15833384 # Func_class: H Coenzyme transport and metabolism # Function: Na+/panthothenate symporter # Organism: Escherichia coli O157:H7 # 1 483 3 485 485 797 100.0 0 MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMGGIVLAMTLTATYISAS SFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILARRYNAVTLNDMLFARYQS RLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYETGLLIFGISIALYTAFGGFRA SVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVQTLQTIDPQLVTPQGADDILSPAFMT SFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIGTIVVAILMFGMHLAGALGRAVIPD LTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSATIIKDLYLNIRPDQM QNETRLKRMSAVITLVLGALLLLAAWKPPEMIIWLNLLAFGGLEAVFLWPLVLGLYWERA NAKGALSAMIVGGVLYAVLATLNIQYLGFHPIVPSLLLSLLAFLVGNRFGTSVPQATVLT TDK >gi|299856441|gb|ADWV01000010.1| GENE 15 16059 - 16301 296 80 aa, chain - ## HITS:1 COG:ECs4129 KEGG:ns NR:ns ## COG: ECs4129 COG3924 # Protein_GI_number: 15833383 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 80 1 80 80 149 100.0 2e-36 MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLPGVAPGFTGFPRWFEMACILTPLLFIGL CWAMVKFIYRDIPLEDDDAA >gi|299856441|gb|ADWV01000010.1| GENE 16 16410 - 17759 1524 449 aa, chain - ## HITS:1 COG:accC KEGG:ns NR:ns ## COG: accC COG0439 # Protein_GI_number: 16131144 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Escherichia coli K12 # 1 449 1 449 449 880 99.0 0 MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSY LNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKADTIRLMGDKVSAI AAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQ SISMTRAEAKAAFNNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVV EEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVT EMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHAP GGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDL QIRIMNDENFQHGGTNIHYLEKKLGLQEK >gi|299856441|gb|ADWV01000010.1| GENE 17 17770 - 18240 467 156 aa, chain - ## HITS:1 COG:ECs4127 KEGG:ns NR:ns ## COG: ECs4127 COG0511 # Protein_GI_number: 15833381 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 246 100.0 2e-65 MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVMQQAYAAPMMQQPAQSN AAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEA MKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE >gi|299856441|gb|ADWV01000010.1| GENE 18 19017 - 19181 71 54 aa, chain - ## HITS:1 COG:no KEGG:EcolC_0453 NR:ns ## KEGG: EcolC_0453 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ATCC8739 # Pathway: not_defined # 1 48 1 48 276 100 97.0 1e-20 MTSLFNRLTGKAVSRTAFVEHLGQEVVQHHPNWKVMISTDHKLMRIDTPLNSHY >gi|299856441|gb|ADWV01000010.1| GENE 19 19218 - 20192 1182 324 aa, chain - ## HITS:1 COG:ECs4125 KEGG:ns NR:ns ## COG: ECs4125 COG0604 # Protein_GI_number: 15833379 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 324 1 324 324 639 100.0 0 MQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI PGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARK AMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR ESTHEYLKSLGASRILPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAAC GLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESFYTQAAKEISL SEAPNFAEAIINNQIQGRTLVKVN >gi|299856441|gb|ADWV01000010.1| GENE 20 20344 - 22284 1212 646 aa, chain + ## HITS:1 COG:ECs4124_3 KEGG:ns NR:ns ## COG: ECs4124_3 COG2200 # Protein_GI_number: 15833378 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 # 395 646 1 252 252 499 100.0 1e-141 MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSNDFST LRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSDLFRELSVPLIKHPGMSLR LVYQDPMGNYFHSLMTTAPLTGAIGFIIVMLFLAVRWLQRQLAGQELLETRATRILNGER GSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDTLIRSYAAQDVKTGLNNRLFFDN QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQVEEQFFTLTNLLSTFMMRYPGAL LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPNNKMLDRDDMIHIGICAWRSGQDT EQVMEHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV TREGQVHHRELMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPEENL AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHISRLQPVIRLVNALG VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQV YATGVRSRSEWQTLIQRGVTGGQGDFFASSQPLDTNVKKYSQRYSV >gi|299856441|gb|ADWV01000010.1| GENE 21 22589 - 23632 1139 347 aa, chain + ## HITS:1 COG:ECs4123 KEGG:ns NR:ns ## COG: ECs4123 COG1077 # Protein_GI_number: 15833377 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Escherichia coli O157:H7 # 1 347 21 367 367 649 100.0 0 MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAK QMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQ VERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNG VVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRN LAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALL RNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE >gi|299856441|gb|ADWV01000010.1| GENE 22 23698 - 24801 1166 367 aa, chain + ## HITS:1 COG:ECs4122 KEGG:ns NR:ns ## COG: ECs4122 COG1792 # Protein_GI_number: 15833376 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Escherichia coli O157:H7 # 1 367 1 367 367 593 99.0 1e-169 MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDTAVSPFYFVSNAPRELL DGVSQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENARLRELLGSPLRQDEQKMV TQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQVVAVAKLTSRVLLICDATHA LPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGDVLVTSGLGGRFPEGYPVAVVSS VKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNGANPMTPEEVHRVANERLMQMMPQV LPSPDAMGPKLPEPATGIAQPTPQQPTTGNAATAPAAPTQPAANRSPQRATPPQSGAQPP ARAPGGQ >gi|299856441|gb|ADWV01000010.1| GENE 23 24801 - 25289 445 162 aa, chain + ## HITS:1 COG:ECs4121 KEGG:ns NR:ns ## COG: ECs4121 COG2891 # Protein_GI_number: 15833375 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 227 100.0 6e-60 MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGF VMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFW AEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ >gi|299856441|gb|ADWV01000010.1| GENE 24 25298 - 25891 632 197 aa, chain + ## HITS:1 COG:yhdE KEGG:ns NR:ns ## COG: yhdE COG0424 # Protein_GI_number: 16131136 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Escherichia coli K12 # 1 197 1 197 197 367 98.0 1e-102 MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKAQAGVAQT AQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLV VTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYE LLSNFNALREKRDKHDG >gi|299856441|gb|ADWV01000010.1| GENE 25 25881 - 27350 1673 489 aa, chain + ## HITS:1 COG:ZcafA KEGG:ns NR:ns ## COG: ZcafA COG1530 # Protein_GI_number: 15803780 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Escherichia coli O157:H7 EDL933 # 1 489 7 495 495 917 100.0 0 MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI GLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT TDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAAEGVGEA ELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFADAELDRIRVDSRLTYE ALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM TTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV LHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETV CYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHSLAEVEIFVGKQVKVQIEPLYN QEQFDVVMM >gi|299856441|gb|ADWV01000010.1| GENE 26 27418 - 31218 3269 1266 aa, chain + ## HITS:1 COG:yhdR+P KEGG:ns NR:ns ## COG: yhdR+P COG3164 # Protein_GI_number: 16132254 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 1266 1 1266 1266 2503 99.0 0 MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKIESATGMPVEASQLSAS WQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTP ITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHR AEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALET AQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFSIP DTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRSDELRIRASNLELAGLEGIRPLAAKLS PALGDVWRSTQPSGKINTLALDIPLQAADKTRFQASWSDLAWKQWKLLPGAEHFSGTLSG SVENGLLTASMKQAKMPYETVFRAPLEIADGQATISWLNNDKGFQLDGRNIDVKAKAVHA RGGFRYLQPANDEPWLGILAGISTDDGSQAWRYFPENLMGKDLVDYLSGAIQGGEADNAT LVYGGNPQLFPYKHNEGQFEVLVPLRNAKFAFQPDWPALTNLDIELDFINDGLWMKTDGV NLGGVRASNLTAVIPDYSKEKLLIDADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGD VNARLHLDIPLNGELVTAKGEVTLRNNSLFIKPLDSTLKNLSGKFSFINGDLQSEPLTAS WFNQPLNVDFSTKEGAKAYQVAVNLNGNWQPAKTSVLPEAVNEALSGSVAWDGKVGIDLP YHAGATYNVEMNGDLNNVSSHLPSPLAKPAGEPLAVNVKVDGNLNSFELTGQAGADNHFN SRWLLGQKLTLDRAIWAADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAA SFPQHITLRTPMLSLGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIK YLYYNPSVAKTRGDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDITISG DTLTLTNGLIDTGFSRLTADGEWVNNPENERTSLKGKLRGQKIDAAAEFFGVTTPIRQSS FNVDYDLHWRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRF DFRDTFGEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVA PEISATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQP RKEKAQ >gi|299856441|gb|ADWV01000010.1| GENE 27 31374 - 32819 1819 481 aa, chain + ## HITS:1 COG:tldD KEGG:ns NR:ns ## COG: tldD COG0312 # Protein_GI_number: 16131134 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Escherichia coli K12 # 1 481 1 481 481 889 100.0 0 MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSY NIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLY TSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVR PLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSA VAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDG TMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPM PRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTK PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT A >gi|299856441|gb|ADWV01000010.1| GENE 28 32947 - 33876 869 309 aa, chain - ## HITS:1 COG:ECs4116 KEGG:ns NR:ns ## COG: ECs4116 COG0583 # Protein_GI_number: 15833370 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 623 100.0 1e-178 MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDELQVKLLNRSTRSIGLTE AGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTMAQNVLAGLTAKMLKEYPG LSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGAMPMVVCAAKSYLTQYGIPEK PADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGAGIAYVP LMWVINEINRGELEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINSLTDYFVEVGKLFQ EMHGRGKEK >gi|299856441|gb|ADWV01000010.1| GENE 29 34059 - 34262 138 67 aa, chain + ## HITS:1 COG:no KEGG:G2583_3962 NR:ns ## KEGG: G2583_3962 # Name: aaeX # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 67 24 90 90 103 100.0 3e-21 MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFVWHPALFNTALYCCLFY LISRLFV >gi|299856441|gb|ADWV01000010.1| GENE 30 34270 - 35202 983 310 aa, chain + ## HITS:1 COG:yhcQ KEGG:ns NR:ns ## COG: yhcQ COG1566 # Protein_GI_number: 16131131 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 310 1 310 310 579 99.0 1e-165 MKTLIRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFSADVVAIAPDVSGLITQ VNVHDNQLVKKGQVLFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMS REEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGS TAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTR DDKGMATIDSNLEWVRLAQRVPVRIRLDNQQENIWPAGTTATVVVTGKQDRDESQDSFFR KMAHRLREFG >gi|299856441|gb|ADWV01000010.1| GENE 31 35208 - 37175 1344 655 aa, chain + ## HITS:1 COG:yhcP KEGG:ns NR:ns ## COG: yhcP COG1289 # Protein_GI_number: 16131130 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 655 1 655 655 1275 99.0 0 MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYS GAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIWAGFCTWISSLVRIENSYA WGLAGYTALIIVITIQPEPLLTPQFAVERCSESVIGIVCAIMADLLFSPRSIKQEVDREL ESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQGMRSNLNMESSRWARANRRLKA INTLSLTLITQSCETYLIQNTRPELITDTFREFFDTPVETAQDVHKQLKRLRRVIAWTGE RETPVTIYSWVAAATRYQLLKRGVISNTKINATEEEILQGEPEVKVESAERHHAMVNFWR TTLSCILGTLFWLWTGWTSGSGAMVMIAVVTSLAMRLPNPRMVAIDFIYGTLAALPLGLL YFLVIIPNTQQSMLLLCISLAVLGFFLGIEVQKRRLGSMGALASTINIIVLDNPMTFHFS QFLDSALGQIVGCVLAFTVILLVRDKSRDRTGRVLLNQFVSAAVSAMTTNVARRKENHLP ALYQQLFLLMNKFPGDLPKFRLALTMIIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVIS ARSDDKRRRYFGQLLEELEIYQEKLRIWQAPPQVTEPVHRLAGMLHKYQHALTDS >gi|299856441|gb|ADWV01000010.1| GENE 32 37267 - 37539 370 90 aa, chain + ## HITS:1 COG:ECs4112 KEGG:ns NR:ns ## COG: ECs4112 COG2732 # Protein_GI_number: 15833366 # Func_class: K Transcription # Function: Barstar, RNAse (barnase) inhibitor # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 158 100.0 3e-39 MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMNDVLPLPLEIEFVHLGE KTRRRFGALILLFDEAEEELEGHLRFNVRH >gi|299856441|gb|ADWV01000010.1| GENE 33 37595 - 37858 334 87 aa, chain - ## HITS:1 COG:no KEGG:G2583_3958 NR:ns ## KEGG: G2583_3958 # Name: yhcN # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 87 18 104 104 133 100.0 2e-30 MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKA EEKGATAYQITEARSGDTWHATAELYK >gi|299856441|gb|ADWV01000010.1| GENE 34 38223 - 38693 586 156 aa, chain - ## HITS:1 COG:ECs4110 KEGG:ns NR:ns ## COG: ECs4110 COG1438 # Protein_GI_number: 15833364 # Func_class: K Transcription # Function: Arginine repressor # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 293 100.0 6e-80 MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRN AKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEG ILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL >gi|299856441|gb|ADWV01000010.1| GENE 35 39128 - 40066 1363 312 aa, chain + ## HITS:1 COG:ECs4109 KEGG:ns NR:ns ## COG: ECs4109 COG0039 # Protein_GI_number: 15833363 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 555 99.0 1e-158 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVSKTCPKACIGIITNP VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGV TILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR ALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQSALEGMLDTLK KDIALGEEFVNK >gi|299856441|gb|ADWV01000010.1| GENE 36 40129 - 41196 1198 355 aa, chain - ## HITS:1 COG:ECs4108 KEGG:ns NR:ns ## COG: ECs4108 COG0265 # Protein_GI_number: 15833362 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Escherichia coli O157:H7 # 1 355 1 355 355 645 100.0 0 MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVN VYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVG SDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIG LNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQL ATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQV NDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPATN >gi|299856441|gb|ADWV01000010.1| GENE 37 41286 - 42653 1460 455 aa, chain - ## HITS:1 COG:degQ KEGG:ns NR:ns ## COG: degQ COG0265 # Protein_GI_number: 16131124 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Escherichia coli K12 # 1 455 1 455 455 777 100.0 0 MKKQTQLLSALALSVGLTLSASFQAVASIPGQVADQAPLPSLAPMLEKVLPAVVSVRVEG TASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQ LNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQT ATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSV GIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPG SGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDT STSSSASAEMITPALEGATLSDGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRD RVNSIAEMRKVLAAKPAIIALQIVRGNESIYLLMR >gi|299856441|gb|ADWV01000010.1| GENE 38 42807 - 43205 548 132 aa, chain - ## HITS:1 COG:STM3347 KEGG:ns NR:ns ## COG: STM3347 COG3105 # Protein_GI_number: 16766642 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 132 3 134 134 229 96.0 9e-61 MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVSHFARSA ELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAESEASNDQAPVQMPRDYSEG ASGLLRTGAKRD >gi|299856441|gb|ADWV01000010.1| GENE 39 43555 - 44526 821 323 aa, chain + ## HITS:1 COG:ECs4105 KEGG:ns NR:ns ## COG: ECs4105 COG1485 # Protein_GI_number: 15833359 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 # 1 323 53 375 375 655 99.0 0 MARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRV HEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFTRGITLVA TSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTLTQAHLWLSPLNDET RAQMDKLWLALAGAKRENSPTLEINHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALS RLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGDRLKFEF QRCLSRLQEMQSEEYLKREHLAG >gi|299856441|gb|ADWV01000010.1| GENE 40 44670 - 45173 881 167 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|226956764|ref|YP_002807559.1| 50S ribosomal subunit protein L13 [Escherichia sp. 1_1_43] # 1 167 1 167 167 343 99 2e-93 MSCEPQQLKTFGCSPTCNYLLGKLLMKTFTAKPETVKRDWYVVDATGKTLGRLATELARR LRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIAR RPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI >gi|299856441|gb|ADWV01000010.1| GENE 41 45189 - 45581 650 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803764|ref|NP_289798.1| 30S ribosomal protein S9 [Escherichia coli O157:H7 EDL933] # 1 130 1 130 130 254 100 1e-66 MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEK LDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRK ARRRPQFSKR >gi|299856441|gb|ADWV01000010.1| GENE 42 45976 - 46614 663 212 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase [Haemophilus influenzae R2866] # 1 203 1 203 212 259 62 4e-68 MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNPNQSVP TLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIING SASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAPLLWRLPQLGIEFSGPGA KELKGYMTRVFERDSFLASLTEAEREMRLGRS >gi|299856441|gb|ADWV01000010.1| GENE 43 46620 - 47117 455 165 aa, chain + ## HITS:1 COG:ECs4101 KEGG:ns NR:ns ## COG: ECs4101 COG2969 # Protein_GI_number: 15833355 # Func_class: R General function prediction only # Function: Stringent starvation protein B # Organism: Escherichia coli O157:H7 # 1 133 1 133 165 253 100.0 1e-67 MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAV GNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYDEDTSIMNDE EASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPALRVVK >gi|299856441|gb|ADWV01000010.1| GENE 44 47160 - 48527 1211 455 aa, chain - ## HITS:1 COG:dcuD KEGG:ns NR:ns ## COG: dcuD COG3069 # Protein_GI_number: 16131117 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Escherichia coli K12 # 1 455 1 455 455 739 99.0 0 MFGIIISVIVLITMGYLILKNYKPQVVLAAAGIFLMMCGVWLGFGGVLDPAKSSGYLIVD IYNEILRMLSNRIAGLGLSIMAVGGYARYMERTGASRAMVSLLSRPLKLIRSPYIILSAT YVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIF AAQVAGMKIATYFFHYQLPVASCVIISVAISHFFVQRAFDKKDKNINHEQAELKALDNVP PLYYAILPVMPLILMLGSLFLAHIGLMQSELHLVVVMLLSLTVTMFVEFFRKHNLRETMD DVQAFFDGMGTQFANVVTLVVAGEIFAKGLTTIGTVDAVIRGAEHSGLGGIGVMIIMALV IAICAIVMGSGNAPFMSFASLIPNIAAGLHVPAVVMIMPMHFATTLARAVSPITAVVVVT SGIAGVSPFAVVKRTAIPMAVGFVVNMIATITLFY >gi|299856441|gb|ADWV01000010.1| GENE 45 48907 - 49698 960 263 aa, chain + ## HITS:1 COG:ECs4099 KEGG:ns NR:ns ## COG: ECs4099 COG2186 # Protein_GI_number: 15833353 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 494 100.0 1e-140 MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMIRRREFGEGEQLPSERE LMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADTIIGELSGMAKDFLSHPGG IAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQSLDNNAAFIRSDVDFHRVLA EIPGNPIFMAIHVALLDWLIAARPTVADQALHEHNNVSYQQHIAIVDAIRRHDPDEADRA LQSHLNSVSATWHAFGQTTNKKK >gi|299856441|gb|ADWV01000010.1| GENE 46 49820 - 50713 1079 297 aa, chain + ## HITS:1 COG:ECs4098 KEGG:ns NR:ns ## COG: ECs4098 COG0329 # Protein_GI_number: 15833352 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Escherichia coli O157:H7 # 1 297 1 297 297 593 99.0 1e-169 MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSERE QVLEIVAEEAKGQIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCD HYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRRE HPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECN KVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQERG >gi|299856441|gb|ADWV01000010.1| GENE 47 50822 - 52312 1624 496 aa, chain + ## HITS:1 COG:ECs4097 KEGG:ns NR:ns ## COG: ECs4097 COG0477 # Protein_GI_number: 15833351 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 496 11 506 506 919 99.0 0 MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLTEVQGEFGLTTVQAASL ISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLACGFAPGYITMFIARLVIGM GMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVAAQVYSLVVPVWGWRALFFIG ILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILYRGEHRIANIVMTLAAATALWFC FAGNLQNAAIVAVLGLLCAAIFISFMVQSTGKRWPTGVMLMVVVLFAFLYSWPIQALLPT YLKTDLAYNPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLASQLLIIPVFA IGGANVWVLGLLLFFQQMLGQGIAGILPKLIGGYFDTDQRAAGLGFTYNVGALGGALAPI IGALIAQRLDLGTALASLSFSLTFVVILLIGLDMPSRVQRWLRPEALRTHDAIDGKPFSG AVPFGSAKNDLVKTKS >gi|299856441|gb|ADWV01000010.1| GENE 48 52360 - 53049 750 229 aa, chain + ## HITS:1 COG:nanE KEGG:ns NR:ns ## COG: nanE COG3010 # Protein_GI_number: 16131113 # Func_class: G Carbohydrate transport and metabolism # Function: Putative N-acetylmannosamine-6-phosphate epimerase # Organism: Escherichia coli K12 # 1 229 1 229 229 402 100.0 1e-112 MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQAGAVAIRIEGVANLQA TRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADIIAIDGTDRPRPVPVETLLA RIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTPETPEEPDLALVKTLSDAGCR VIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQWYNTAMKKAVL >gi|299856441|gb|ADWV01000010.1| GENE 49 53046 - 53921 324 291 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 6 287 8 314 323 129 30 8e-29 MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVA IASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTDLPTIAINDAQAAAWAEYQALEGD VTEMVFITVSTGVGGGVVSGGKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASG RGIAAAAQGELAGADARTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVG GSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQGEKL >gi|299856441|gb|ADWV01000010.1| GENE 50 53918 - 54382 379 154 aa, chain + ## HITS:1 COG:yhcH KEGG:ns NR:ns ## COG: yhcH COG2731 # Protein_GI_number: 16131111 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli K12 # 1 154 1 154 154 285 100.0 3e-77 MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEK KAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMF AVFMPGEPHKPGCVVGEPGEIKKVVVKVKADLMA >gi|299856441|gb|ADWV01000010.1| GENE 51 54442 - 55569 571 375 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855185|ref|ZP_02477956.1| 50S ribosomal protein L31 [Haemophilus parasuis 29755] # 19 372 12 338 339 224 36 2e-57 MESLSERTSTGYQQIHDGIIHLVDSARTETVRSVNALMTATYWEIGRRIVEFEQGGEARA AYGAQLIKRLSKDLSLRYKRGFSAKNLRQMRLFYLFFQHVEIRQTVSGELTPLGIPQTPS AEFPSAKIWQTLSAKSFPLPWSTYVRLLSVKNADARSFYEKETLRCGWSVRQLERQIATQ FYERTLLSHDKSAMLQQHAPTETHILPQQAIRDPFVLEFLELKDEYSESDFEEALINHLM DFMLELGDDFAFVGRQRRLRIDDNWFRVDLLFFHRRLRCLLIVDLKVGKFSYSDAGQMNM YLNYAKEHWTLPDENPPIGLVLCAEKGAGEAHYALAGLPNTVLASEYKMQLPDEKRLADE LVRTQAVLEEGYRRR >gi|299856441|gb|ADWV01000010.1| GENE 52 55753 - 57171 1628 472 aa, chain - ## HITS:1 COG:gltD KEGG:ns NR:ns ## COG: gltD COG0493 # Protein_GI_number: 16131103 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 1 472 1 472 472 973 99.0 0 MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEPFSEGQAKAQADRCLSCGNPYCEWKCP VHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDRLCEGSCTLNDEFGAVTIG NIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLACADVLTRNGVKAVVFDRHPE IGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVGRDVQLDDLLSDYDAVFLGVG TYQSMRGGLENEDADGVYAALPFLIANTKQLMGFGETRDEPFVSMEGKRVVVLGGGDTAM DCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKNAREEGVEFKFNVQPLGIEVNGNGKVS GVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPADAVIMAFGFRPHNMEWLAKHSVELDSQG RIIAPEGSDNAFQTSNPKIFAGGDIVRGSDLVVTAIAEGRKAADAIMNWLEV >gi|299856441|gb|ADWV01000010.1| GENE 53 57184 - 61644 4870 1486 aa, chain - ## HITS:1 COG:ECs4091_2 KEGG:ns NR:ns ## COG: ECs4091_2 COG0069 # Protein_GI_number: 15833345 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Escherichia coli O157:H7 # 379 1194 1 816 816 1647 99.0 0 MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQ KPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIVEEELQRETLSIVGWRDVP TNEGVLGEIALSSLPHIEQIFVNAPAGWRPRDMERRLFIARRRIEKRLEADKDFYVCSLS NLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGE INTITGNRQWARARTYKFQTPLIPDLHDAAPFVNETGSDSSSMDNMLELLLAGGMDIIRA MRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWDGPAGIVMSDGRFAACNLDRNGLRPAR YVITKDKLITCASEVGIWDYQPDEVVEKGRVGPGELMVIDTRSGRILHSAETDDDLKSRH PYKEWMEKNVRRLVPFEDLPDEEVGSRELDDDTLASYQKQFNYSAEELDSVIRVLGENGQ EAVGSMGDDTPFAVLSSQPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLATSIGREMNVF CEAEGQAHRLSFKSPILLYSDFKQLTTMKEEHYRADTLDITFDVTKTTLEATVKELCDKA EKMVRSGTVLLVLSDRNIAKDRLPVPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPH HFAVLLGFGATAIYPYLAYETLGRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGIS TIASYRCSKLFEAVGLHDDVVGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQ GGLLKYVHGGEYHAYNPDVVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGE NAVNIADVEPASELFKRFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYG TNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSV PGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADL ITIAGYDGGTGASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDII KAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYF EFIARETRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALY CTENNPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQG LAADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSH EASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCILGK TGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLSVDDLAIHEEHLRGLITEHVQHTGS QRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ >gi|299856441|gb|ADWV01000010.1| GENE 54 62319 - 63248 898 309 aa, chain + ## HITS:1 COG:ECs4090 KEGG:ns NR:ns ## COG: ECs4090 COG1242 # Protein_GI_number: 15833344 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 642 99.0 0 MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEAQQH RSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPD CVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKV CSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELED YTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEHGVQGSAL ERPWIPPTE >gi|299856441|gb|ADWV01000010.1| GENE 55 63344 - 65680 2740 778 aa, chain + ## HITS:1 COG:ZarcB_1 KEGG:ns NR:ns ## COG: ZarcB_1 COG0642 # Protein_GI_number: 15803750 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 562 1 562 562 1055 100.0 0 MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQVESIDVIRSIF FGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDLSLNVQLKDNIAQLNQEIA VREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSFLDASPDLVFYRNEDKEFSGC NRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRKA CFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNG IVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTS FLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQGQVT VRVRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRLA KNMGGDITVTSEQGKGSTFTLTIHAPSVAEEVDDAFDEDDMPLPALNVLLVEDIELNVIV ARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDL PPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSK SEALLDIPMLEQYLELVGPKLITDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIK GAAGSVGLRHLQQLGQQIQSPDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK >gi|299856441|gb|ADWV01000010.1| GENE 56 65910 - 66563 779 217 aa, chain + ## HITS:1 COG:yhbL KEGG:ns NR:ns ## COG: yhbL COG3155 # Protein_GI_number: 16131099 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in an early stage of isoprenoid biosynthesis # Organism: Escherichia coli K12 # 1 217 4 220 220 407 99.0 1e-113 MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTET RNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLSNFATLGSECTVDRELKAL AQAMHQAGKPLGFMCIAPAMLPKIFDFPLRLTIGTDIDTAEVLEEMGAEHVPCPVDDIVV DEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE >gi|299856441|gb|ADWV01000010.1| GENE 57 66617 - 67288 460 223 aa, chain + ## HITS:1 COG:mtgA KEGG:ns NR:ns ## COG: mtgA COG0744 # Protein_GI_number: 16131098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Escherichia coli K12 # 1 223 20 242 242 437 100.0 1e-123 MVVLAVFWGGGIALFSVAPVPFSAVMVERQVSAWLHGNFRYVAHSDWVSMDQISPWMGLA VIAAEDQKFPEHWGFDVASIEKALAHNERNENRIRGASTISQQTAKNLFLWDGRSWVRKG LEAGLTLGIETVWSKKRILTVYLNIAEFGDGVFGVEAAAQRYFHKPASKLTRSEAALLAA VLPNPLRFKVSSPSGYVRSRQAWILRQMYQLGGEPFMQQHQLD >gi|299856441|gb|ADWV01000010.1| GENE 58 67285 - 67917 466 210 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3625 NR:ns ## KEGG: EC55989_3625 # Name: yrbL # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 210 1 210 210 427 100.0 1e-118 MIRLSEQNPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLGRRLKDW SGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDIAQLRQLLKQLKRY LQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLIPLATWSKWCCLRKQERLWKR FIAQPALAIALQKDLQPRESKTLALTSREA >gi|299856441|gb|ADWV01000010.1| GENE 59 68131 - 68403 276 90 aa, chain - ## HITS:1 COG:ECs4085 KEGG:ns NR:ns ## COG: ECs4085 COG1925 # Protein_GI_number: 15833339 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 149 100.0 2e-36 MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEAEANSVIALLMLDSAKG RQIEVEATGPQEEEALAAVIALFNSGFDED >gi|299856441|gb|ADWV01000010.1| GENE 60 68400 - 69254 839 284 aa, chain - ## HITS:1 COG:ECs4084 KEGG:ns NR:ns ## COG: ECs4084 COG1660 # Protein_GI_number: 15833338 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Escherichia coli O157:H7 # 1 284 1 284 284 556 100.0 1e-158 MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADREISAAVSIDVRNM PESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDKES DLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV FDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY LTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKP >gi|299856441|gb|ADWV01000010.1| GENE 61 69300 - 69791 406 163 aa, chain - ## HITS:1 COG:ptsN KEGG:ns NR:ns ## COG: ptsN COG1762 # Protein_GI_number: 16131094 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli K12 # 1 163 1 163 163 303 100.0 1e-82 MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLSLPPQVVFEAILTREKM GSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQPVDLLFALLVPADQTKTH LHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTPDEA >gi|299856441|gb|ADWV01000010.1| GENE 62 69909 - 70196 462 95 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227335124|ref|ZP_03838780.1| hypothetical protein CIT292_04930 [Citrobacter youngae ATCC 29220] # 1 95 1 95 95 182 94 8e-45 MQLNITGNNVEITEALREFVTAKFAKLEQYFDRINQVYVVLKVEKVTHTSDATLHVNGGE IHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH >gi|299856441|gb|ADWV01000010.1| GENE 63 70219 - 71652 1382 477 aa, chain - ## HITS:1 COG:ECs4081 KEGG:ns NR:ns ## COG: ECs4081 COG1508 # Protein_GI_number: 15833335 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Escherichia coli O157:H7 # 1 477 1 477 477 873 100.0 0 MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQIDTHEEIDTRE TQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSGDYIDDELPVYQGETTQTL QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLEDILESMGDEEIDIDEVEAVLK RIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARLIISDHLDLLANHDFRTLMRVTR LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNSDSIPRLQIN QHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV >gi|299856441|gb|ADWV01000010.1| GENE 64 71700 - 72425 287 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 2 235 3 233 305 115 31 2e-24 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI IIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANE LMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRII EHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVYLGEDFR L >gi|299856441|gb|ADWV01000010.1| GENE 65 72432 - 72989 548 185 aa, chain - ## HITS:1 COG:ECs4079 KEGG:ns NR:ns ## COG: ECs4079 COG1934 # Protein_GI_number: 15833333 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 185 1 185 185 330 100.0 1e-90 MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIV TQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNGKPVEGHASQMHYELAKDF VVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRVTTVLVPSQLQDKNNKGQTPA QKKGN >gi|299856441|gb|ADWV01000010.1| GENE 66 72958 - 73533 415 191 aa, chain - ## HITS:1 COG:ECs4078 KEGG:ns NR:ns ## COG: ECs4078 COG3117 # Protein_GI_number: 15833332 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 354 100.0 7e-98 MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKSEHTDTLVYNPEGALSY RLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLTNDRMLYLYGHVEVNAL VPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRT SYEIQNKQTQP >gi|299856441|gb|ADWV01000010.1| GENE 67 73530 - 74096 746 188 aa, chain - ## HITS:1 COG:ECs4077 KEGG:ns NR:ns ## COG: ECs4077 COG1778 # Protein_GI_number: 15833331 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 188 1 188 188 354 99.0 5e-98 MSKAGASLATCYGPVSADVMAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENV AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL DEAKGQSI >gi|299856441|gb|ADWV01000010.1| GENE 68 74117 - 75103 926 328 aa, chain - ## HITS:1 COG:yrbH_1 KEGG:ns NR:ns ## COG: yrbH_1 COG0794 # Protein_GI_number: 16131087 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Escherichia coli K12 # 1 212 1 212 212 424 100.0 1e-118 MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGKS GHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLK RLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLK ARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMT VICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSR HITSVMVADGDHLLGVLHMHDLLRAGVV >gi|299856441|gb|ADWV01000010.1| GENE 69 75117 - 76094 724 325 aa, chain - ## HITS:1 COG:yrbG KEGG:ns NR:ns ## COG: yrbG COG0530 # Protein_GI_number: 16131086 # Func_class: P Inorganic ion transport and metabolism # Function: Ca2+/Na+ antiporter # Organism: Escherichia coli K12 # 1 325 1 325 325 482 100.0 1e-136 MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTVVSIGTSLPEVIVSLAA SLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLRRELPLMLLVSVVAGSVLY DGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTREQLAELPRDGGLPVAFLWLG IALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAIGTSLPELATAIAGVRKGENDIA VGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDYSVMLLVSIIFALLCWRRSPQPGRG VGVLLTGGFIVWLAMLYWLSPILVE >gi|299856441|gb|ADWV01000010.1| GENE 70 76304 - 77113 581 269 aa, chain + ## HITS:1 COG:ECs4074 KEGG:ns NR:ns ## COG: ECs4074 COG1127 # Protein_GI_number: 15833328 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, ATPase component # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 504 99.0 1e-143 MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP DHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPL LHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITM GVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWILADKKIIAHGSAQALQANPDPRV RQFLDGIADGPVPFRYPAGDYHADLLPGS >gi|299856441|gb|ADWV01000010.1| GENE 71 77121 - 77903 812 260 aa, chain + ## HITS:1 COG:ECs4073 KEGG:ns NR:ns ## COG: ECs4073 COG0767 # Protein_GI_number: 15833327 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Escherichia coli O157:H7 # 1 260 1 260 260 438 100.0 1e-123 MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIV VSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEI GLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGI DSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVV HSSLAVLGLDFVLTALMFGN >gi|299856441|gb|ADWV01000010.1| GENE 72 77908 - 78459 616 183 aa, chain + ## HITS:1 COG:ECs4072 KEGG:ns NR:ns ## COG: ECs4072 COG1463 # Protein_GI_number: 15833326 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 335 100.0 3e-92 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI GGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFED PELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVG TTK >gi|299856441|gb|ADWV01000010.1| GENE 73 78478 - 79113 937 211 aa, chain + ## HITS:1 COG:yrbC KEGG:ns NR:ns ## COG: yrbC COG2854 # Protein_GI_number: 16131082 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Escherichia coli K12 # 1 211 1 211 211 394 100.0 1e-109 MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKNEQPQIRANPDYLRTIV DQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIA PEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQNE WGTLLRTKGIDGLTAQLKSISQQKITLEEKK >gi|299856441|gb|ADWV01000010.1| GENE 74 79113 - 79406 363 97 aa, chain + ## HITS:1 COG:yrbB KEGG:ns NR:ns ## COG: yrbB COG3113 # Protein_GI_number: 16131081 # Func_class: R General function prediction only # Function: Predicted NTP binding protein (contains STAS domain) # Organism: Escherichia coli K12 # 1 97 33 129 129 170 100.0 6e-43 MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDLSRVSRVDTGGLALLLH LIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPR >gi|299856441|gb|ADWV01000010.1| GENE 75 79551 - 79820 322 89 aa, chain + ## HITS:1 COG:ECs4069 KEGG:ns NR:ns ## COG: ECs4069 COG5007 # Protein_GI_number: 15833323 # Func_class: K Transcription # Function: Predicted transcriptional regulator, BolA superfamily # Organism: Escherichia coli O157:H7 # 1 89 1 89 89 179 100.0 1e-45 MIEDPMENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVKKQQTVYGPLME YIADNRIHAVSIKAYTPAEWARDRKLNGF >gi|299856441|gb|ADWV01000010.1| GENE 76 79875 - 81134 1512 419 aa, chain + ## HITS:1 COG:murA KEGG:ns NR:ns ## COG: murA COG0766 # Protein_GI_number: 16131079 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Escherichia coli K12 # 1 419 1 419 419 812 100.0 0 MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQL GAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCTIGAR PVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDKVSVGATVTIMCAATLAEGTT IIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGVERLGGGVYRVLPDRIETGTFLV AAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVGEDWISLDMHGKRPKAVNVRTAPHP AFPTDMQAQFTLLNLVAEGTGFITETVFENRFMHVPELSRMGAHAEIESNTVICHGVEKL SGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIERVKGE >gi|299856441|gb|ADWV01000010.1| GENE 77 81182 - 81460 299 92 aa, chain - ## HITS:1 COG:Znlp KEGG:ns NR:ns ## COG: Znlp COG3423 # Protein_GI_number: 15803728 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 1 92 1 92 92 174 100.0 4e-44 MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSRPWPKGEMIIAKALGTD PWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK >gi|299856441|gb|ADWV01000010.1| GENE 78 81689 - 82660 1095 323 aa, chain - ## HITS:1 COG:ispB KEGG:ns NR:ns ## COG: ispB COG0142 # Protein_GI_number: 16131077 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Escherichia coli K12 # 1 323 1 323 323 624 100.0 1e-179 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVG YEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAF QMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQ CSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPL LHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQ VLPDTPWREALIGLAHIAVQRDR >gi|299856441|gb|ADWV01000010.1| GENE 79 82895 - 83230 562 111 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224585100|ref|YP_002638899.1| 50S ribosomal protein L21 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] # 1 111 1 111 111 221 97 2e-56 MCAEAEFYMYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVP FVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGISA >gi|299856441|gb|ADWV01000010.1| GENE 80 83251 - 83508 437 85 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803725|ref|NP_289759.1| 50S ribosomal protein L27 [Escherichia coli O157:H7 EDL933] # 1 85 1 85 85 172 100 6e-42 MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLF AKADGKVKFEVKGPKNRKFISIEAE >gi|299856441|gb|ADWV01000010.1| GENE 81 83635 - 84600 751 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|46133178|ref|ZP_00156740.2| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily [Haemophilus influenzae R2866] # 1 303 1 300 306 293 49 2e-78 MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFLMASIGLGAILAVKKRL PPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFIL KEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWGVIFGVGAATVWVSYGVAQKV LLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQLACLIFCGLNTLVGYGALAEAM ARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIG HRIWGGLRKHTTVVSQPRAGE >gi|299856441|gb|ADWV01000010.1| GENE 82 84616 - 85788 1548 390 aa, chain + ## HITS:1 COG:ECs4062 KEGG:ns NR:ns ## COG: ECs4062 COG0536 # Protein_GI_number: 15833316 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 390 1 390 390 687 99.0 0 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV LLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAKPRWLVFNKIDLLDKAEAEEKAKAI AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQ LEEIAEEDDEDWDDDWDEDDEEGVEFIYKR >gi|299856441|gb|ADWV01000010.1| GENE 83 85828 - 87147 900 439 aa, chain - ## HITS:1 COG:dacB KEGG:ns NR:ns ## COG: dacB COG2027 # Protein_GI_number: 16131072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Escherichia coli K12 # 1 439 39 477 477 882 100.0 0 MVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLK GDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQ CFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE LDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQT QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS LQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNR RIPLVRFESRLYKDIYQNN >gi|299856441|gb|ADWV01000010.1| GENE 84 87509 - 87985 604 158 aa, chain + ## HITS:1 COG:STM3299 KEGG:ns NR:ns ## COG: STM3299 COG0782 # Protein_GI_number: 16766595 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Salmonella typhimurium LT2 # 1 158 1 158 158 282 96.0 2e-76 MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEG RIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLI SVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL >gi|299856441|gb|ADWV01000010.1| GENE 85 88141 - 88434 454 97 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|188532496|ref|YP_001906293.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Erwinia tasmaniensis Et1/99] # 1 97 1 97 97 179 93 7e-44 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR >gi|299856441|gb|ADWV01000010.1| GENE 86 88560 - 89189 575 209 aa, chain + ## HITS:1 COG:ECs4058 KEGG:ns NR:ns ## COG: ECs4058 COG0293 # Protein_GI_number: 15833312 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 23S rRNA methylase # Organism: Escherichia coli O157:H7 # 1 209 1 209 209 409 100.0 1e-114 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA APGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQV VMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS LFTKVKVRKPDSSRARSREVYIVATGRKP >gi|299856441|gb|ADWV01000010.1| GENE 87 89280 - 91223 1683 647 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 1 599 1 597 636 652 56 0.0 MSDMAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREIN VTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWI FFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRF QKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMF EQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAAT NRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFS GADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAG HAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEE IIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHM SDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMARRD VRPPAGWEEPGASNNSGDNGSPKAPRPVDEPRTPNPGNTMSEQLGDK >gi|299856441|gb|ADWV01000010.1| GENE 88 91313 - 92161 844 282 aa, chain + ## HITS:1 COG:ECs4056 KEGG:ns NR:ns ## COG: ECs4056 COG0294 # Protein_GI_number: 15833310 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Escherichia coli O157:H7 # 1 282 16 297 297 556 100.0 1e-158 MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGE STRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSL SEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKE KLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSL ACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAKENKRYE >gi|299856441|gb|ADWV01000010.1| GENE 89 92154 - 93491 1588 445 aa, chain + ## HITS:1 COG:mrsA KEGG:ns NR:ns ## COG: mrsA COG1109 # Protein_GI_number: 16131066 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Escherichia coli K12 # 1 445 1 445 445 836 100.0 0 MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLES ALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTK LPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIEFCKATFPNELSLSELKIVVD CANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGATDVRALQARVLAEKADLGIAF DGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIP FARAKVGDRYVLEKMQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQVLAAMARNHMSLH DLCSGMKMFPQILVNVRYTAGSGDPLEHESVKAVTAEVEAALGNRGRVLLRKSGTEPLIR VMVEGEDEAQVTEFAHRIADAVKAV >gi|299856441|gb|ADWV01000010.1| GENE 90 93719 - 94051 390 110 aa, chain + ## HITS:1 COG:ECs4054 KEGG:ns NR:ns ## COG: ECs4054 COG1314 # Protein_GI_number: 15833308 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 185 99.0 2e-47 MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLA TLFFIISLVLGNINSNKTNKGSEWENLSAPVKTEQTQPAAPAKPTSDIPN >gi|299856441|gb|ADWV01000010.1| GENE 91 94611 - 96236 448 541 aa, chain + ## HITS:1 COG:yhbX KEGG:ns NR:ns ## COG: yhbX COG2194 # Protein_GI_number: 16131064 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 541 7 547 547 1090 99.0 0 MTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLR LLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFA FLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKAFSPYILASR FATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVRVDNMSL YGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMA NQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMKTVYVRGFDELLLPHLSQALQQNTQQKKL IVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDRRASVMY FADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNY LINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDKQGNPTPEGQ G >gi|299856441|gb|ADWV01000010.1| GENE 92 96244 - 97587 1782 447 aa, chain - ## HITS:1 COG:argG KEGG:ns NR:ns ## COG: argG COG0137 # Protein_GI_number: 16131063 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Escherichia coli K12 # 1 447 1 447 447 910 99.0 0 MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRA MEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKE DGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACG FDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVNPIMGVKFWDESVKIPAEEVTVR FEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALL HIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQGRWFDSQALMLRDSLQRWVASQITGEV TLELRRGNDYSILNTVSENLTYKPERLTMEKGDSVFSPDDRIGQLTMRNLDITDTREKLF GYAKTGLLSSSATSGVPQVENMENKGQ >gi|299856441|gb|ADWV01000010.1| GENE 93 98248 - 98670 355 140 aa, chain + ## HITS:1 COG:ECs4051 KEGG:ns NR:ns ## COG: ECs4051 COG0779 # Protein_GI_number: 15833305 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 140 13 152 152 273 100.0 5e-74 MITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPITV AYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTVE GKDEVFALSNIQKANLVPHF >gi|299856441|gb|ADWV01000010.1| GENE 94 98698 - 100185 1026 495 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 482 9 483 537 399 43 1e-110 MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVQIDRKSGDFDTFR RWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTFDRITTQTAKQVIVQKVRE AERAMVVDQFREHEGEIITGVVKKVNRDNISLDLGNNAEAVILREDMLPRENFRPGDRVR GVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKT NDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE DKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIDTFT KYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIEGLDEPTVEALRERAKNALATIAQA QEESLGDNKPADDLLNLEGVDRDLAFKLAARGVCTLEDLAEQGIDDLADIEGLTDEKAGA LIMAARNICWFGDEA >gi|299856441|gb|ADWV01000010.1| GENE 95 100210 - 102882 3172 890 aa, chain + ## HITS:1 COG:ECs4049 KEGG:ns NR:ns ## COG: ECs4049 COG0532 # Protein_GI_number: 15833303 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Escherichia coli O157:H7 # 1 890 1 890 890 1394 100.0 0 MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQTLIDHLNQKNSGPDKLT LQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREA EESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKNAQAEKARREQEA AELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDNAEPTEDSSDYHVTTSQHARQAE DESDREVEGGRGRGRNAKAARPKKGNKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQ KPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEE MGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGE AGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTI EAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTG IDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCG FEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGK FREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKI IGSGVGGITETDATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKA AMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEG ELESLRRFKDDVNEVRNGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA >gi|299856441|gb|ADWV01000010.1| GENE 96 103046 - 103447 624 133 aa, chain + ## HITS:1 COG:ECs4048 KEGG:ns NR:ns ## COG: ECs4048 COG0858 # Protein_GI_number: 15833302 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Escherichia coli O157:H7 # 1 133 1 133 133 239 100.0 1e-63 MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDK DEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHD EERRVNPDDSKED >gi|299856441|gb|ADWV01000010.1| GENE 97 103447 - 104391 1092 314 aa, chain + ## HITS:1 COG:ECs4047 KEGG:ns NR:ns ## COG: ECs4047 COG0130 # Protein_GI_number: 15833301 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Escherichia coli O157:H7 # 1 314 1 314 314 615 100.0 1e-176 MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE GRVAPRRLVVEYPA >gi|299856441|gb|ADWV01000010.1| GENE 98 104540 - 104809 445 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16131057|ref|NP_417634.1| 30S ribosomal subunit protein S15 [Escherichia coli str. K-12 substr. MG1655] # 1 89 1 89 89 176 100 7e-43 MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMV SQRRKLLDYLKRKDVARYTQLIERLGLRR >gi|299856441|gb|ADWV01000010.1| GENE 99 105056 - 107191 188 711 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229537485|ref|ZP_04426621.1| ribosomal protein S1 [Planctomyces limnophilus DSM 3776] # 621 703 433 516 557 77 46 5e-13 MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSV NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNE ALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAI EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR DAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT DGEKAKHAIRRIEEITAEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE >gi|299856441|gb|ADWV01000010.1| GENE 100 107300 - 108184 624 294 aa, chain + ## HITS:1 COG:ECs4044 KEGG:ns NR:ns ## COG: ECs4044 COG4785 # Protein_GI_number: 15833298 # Func_class: R General function prediction only # Function: Lipoprotein NlpI, contains TPR repeats # Organism: Escherichia coli O157:H7 # 1 294 1 294 294 561 100.0 1e-160 MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDE RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFD SVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEK QAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYL GKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ >gi|299856441|gb|ADWV01000010.1| GENE 101 108364 - 110253 2450 629 aa, chain + ## HITS:1 COG:ECs4043 KEGG:ns NR:ns ## COG: ECs4043 COG0513 # Protein_GI_number: 15833297 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 629 18 646 646 1055 99.0 0 MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF SLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELD LETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRER RDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGE VLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGD GRRFSGERREGRAPRRDDSTGRRRFGGDA >gi|299856441|gb|ADWV01000010.1| GENE 102 110407 - 111651 1505 414 aa, chain + ## HITS:1 COG:ECs4042 KEGG:ns NR:ns ## COG: ECs4042 COG0814 # Protein_GI_number: 15833296 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 414 1 414 414 694 99.0 0 MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALIFTWFCMLHSGL MILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAE MSLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATL FNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPKTIVKCLVYGTLMALALY TIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLG VTLGLFDYLADLFGFDDSALGRLKTALLTFAPPVVGGLLFPNGFLYAIGYAGLAATIWAA IVPALLARASRKRFGSPKFRVWGGKPMITLILVFGVGNALVHILSSFNLLPVYQ >gi|299856441|gb|ADWV01000010.1| GENE 103 111769 - 112776 1006 335 aa, chain - ## HITS:1 COG:yhbW KEGG:ns NR:ns ## COG: yhbW COG2141 # Protein_GI_number: 16131052 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 335 1 335 335 671 99.0 0 MTDKTIAFSLLDLAPIPEGSSAREAFSRSLDLARLAEKRGYHRYWLAEHHNMTGIASAAT SVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRT MMALRRHMSGDIDNFPRDVAELVDWFDARDPNPNVRPVPGYGEKIPVWLLGSSLYSAQLA AQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFT SMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILR ETDADEIMVNGQIFDHQARLHSFELAMDVKEELLG >gi|299856441|gb|ADWV01000010.1| GENE 104 112982 - 113860 956 292 aa, chain - ## HITS:1 COG:ECs4040 KEGG:ns NR:ns ## COG: ECs4040 COG0826 # Protein_GI_number: 15833294 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 292 7 298 298 601 100.0 1e-172 MKYSLGPVLWYWPKETLEDFYQQAATSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGS GKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYN AVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARC FTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGL VDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA >gi|299856441|gb|ADWV01000010.1| GENE 105 113869 - 114864 932 331 aa, chain - ## HITS:1 COG:ECs4039 KEGG:ns NR:ns ## COG: ECs4039 COG0826 # Protein_GI_number: 15833293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 678 100.0 0 MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRK LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASA TNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMSEGRCYLSS YLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGRYLVDG ERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKADPQ NFVPQSAWMETLGSMSEGTQTTLGAYHRKWQ >gi|299856441|gb|ADWV01000010.1| GENE 106 115073 - 115597 725 174 aa, chain + ## HITS:1 COG:ECs4038 KEGG:ns NR:ns ## COG: ECs4038 COG3154 # Protein_GI_number: 15833292 # Func_class: I Lipid transport and metabolism # Function: Putative lipid carrier protein # Organism: Escherichia coli O157:H7 # 1 174 1 174 174 325 100.0 2e-89 MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSI HVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEG DTELGLYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMKTAPETKQTSVGEPC >gi|299856441|gb|ADWV01000010.1| GENE 107 115591 - 116094 709 167 aa, chain + ## HITS:1 COG:ECs4037 KEGG:ns NR:ns ## COG: ECs4037 COG3153 # Protein_GI_number: 15833291 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 332 100.0 2e-91 MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVIGYVAFS PVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRF GFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEYHEHFNRF >gi|299856441|gb|ADWV01000010.1| GENE 108 116081 - 116383 272 100 aa, chain - ## HITS:1 COG:yhbQ KEGG:ns NR:ns ## COG: yhbQ COG2827 # Protein_GI_number: 16131047 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Escherichia coli K12 # 1 100 1 100 100 179 99.0 1e-45 MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLAFSAPVGDRSLA LRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD >gi|299856441|gb|ADWV01000010.1| GENE 109 116434 - 116877 390 147 aa, chain + ## HITS:1 COG:yhbP KEGG:ns NR:ns ## COG: yhbP COG3787 # Protein_GI_number: 16131046 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 147 1 147 147 291 100.0 3e-79 METLIAISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFYILTEEKTRHAQMSGPQ AAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYNRRFPVARMLSAPVWEIRL DEIKFTDNTLGFGKKMIWLRDSGTEQA >gi|299856441|gb|ADWV01000010.1| GENE 110 116857 - 117375 594 172 aa, chain - ## HITS:1 COG:ECs4034 KEGG:ns NR:ns ## COG: ECs4034 COG0693 # Protein_GI_number: 15833288 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli O157:H7 # 1 172 15 186 186 330 100.0 7e-91 MSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDE VTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRK LTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLGA >gi|299856441|gb|ADWV01000010.1| GENE 111 117503 - 118138 582 211 aa, chain + ## HITS:1 COG:yraR KEGG:ns NR:ns ## COG: yraR COG0702 # Protein_GI_number: 16131044 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 1 211 16 226 226 422 100.0 1e-118 MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGVFNPHDPQLSDALAQVT DPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLGAQHMLVVSAMGANAHSPF FYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNETLFAPLFRLLPGNWKSIDAR DVARVMLAESMRPEHEGVTILSSSELRKRAE >gi|299856441|gb|ADWV01000010.1| GENE 112 118211 - 119251 1308 346 aa, chain + ## HITS:1 COG:yraQ KEGG:ns NR:ns ## COG: yraQ COG0701 # Protein_GI_number: 16131043 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli K12 # 1 346 1 346 346 575 100.0 1e-164 MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWEPYYGKAFTAAETHSIGKSILAQADA NPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSL PGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVAG LVMVLLIATLVQKWVRETPQTQAPVEIDIPEAQGGFFSRWGRALWTLFWSTIPVYILAVL VLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMGTAPALA LLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAVSGVIVGGLALLF >gi|299856441|gb|ADWV01000010.1| GENE 113 119365 - 119940 629 191 aa, chain - ## HITS:1 COG:ECs4031 KEGG:ns NR:ns ## COG: ECs4031 COG2823 # Protein_GI_number: 15833285 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 295 99.0 4e-80 MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSK DEQIKKETRINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLG EASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGV KRVTTAFTFIK >gi|299856441|gb|ADWV01000010.1| GENE 114 119950 - 120540 457 196 aa, chain - ## HITS:1 COG:ECs4030 KEGG:ns NR:ns ## COG: ECs4030 COG0279 # Protein_GI_number: 15833284 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 370 100.0 1e-103 MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFA ASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRG NSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVN CLCDLIDNTLFPHQDD >gi|299856441|gb|ADWV01000010.1| GENE 115 120560 - 120955 181 131 aa, chain - ## HITS:1 COG:ECs4029 KEGG:ns NR:ns ## COG: ECs4029 COG0792 # Protein_GI_number: 15833283 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Escherichia coli O157:H7 # 1 131 1 131 131 247 99.0 5e-66 MATVPTRSGSPRQLTTKQTGDAWEVQARRWLEGKGLRFVAANVNERGGEIDLIMREGRTT VFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEV EWIKDAFNDHS >gi|299856441|gb|ADWV01000010.1| GENE 116 120913 - 122949 1855 678 aa, chain - ## HITS:1 COG:yraM KEGG:ns NR:ns ## COG: yraM COG3107 # Protein_GI_number: 16131039 # Func_class: R General function prediction only # Function: Putative lipoprotein # Organism: Escherichia coli K12 # 1 678 1 678 678 1191 99.0 0 MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDD TRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDAQRREKTLLAVEIKLAQKDFAGAQN LLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQA LSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPA ADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKI YDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNIC YFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFG STSELRAGVNGGSGIALTGSPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYI VATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGN LPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVI NRKLSWLQYQQGQVVPAS >gi|299856441|gb|ADWV01000010.1| GENE 117 123014 - 123874 996 286 aa, chain + ## HITS:1 COG:ECs4027 KEGG:ns NR:ns ## COG: ECs4027 COG0313 # Protein_GI_number: 15833281 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 533 100.0 1e-151 MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINA RLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLP GPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLE DIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHKAQEE DLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG >gi|299856441|gb|ADWV01000010.1| GENE 118 123917 - 125008 528 363 aa, chain - ## HITS:1 COG:yraK KEGG:ns NR:ns ## COG: yraK COG3539 # Protein_GI_number: 16131037 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 363 1 363 363 664 98.0 0 MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSAT LSSTNWQYACTCSAGKAVKLVYMVSPVLTTTGHQAGYYKLNDSLDIKTTLQANDIPGLVT DQTVSVNTRFTQIKSNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTI PKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQ KFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNAP DVGIRIENLGGGVANIPFQNGILPVDPSGHGTINMRAWPVNLVGGELETGKFQGTATITV IVR >gi|299856441|gb|ADWV01000010.1| GENE 119 125019 - 127535 1528 838 aa, chain - ## HITS:1 COG:ECs4022 KEGG:ns NR:ns ## COG: ECs4022 COG3188 # Protein_GI_number: 15833276 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 838 1 838 838 1587 99.0 0 MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYYFDPIMLETTKSGMQTT DLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVDE IPALAEKDDDSVINSLEQIIPGTAAEFDFNHQRLNLSIPQIALYRDARGYVSPSRWDDGI PTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQASSWNTISS YLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSS AIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPMM QRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLGSEDYYALGIGI GGTLGALGALSMDINRADTQFDNRHSFHGYQWRTQYIKDIPETNTNIAVSYYRYTNDGYF SFDEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNDKNRNISVGVSGQ QWGIGYSLNYQYSRYTDQNNDRALSLNLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLD GSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAGYSYGNDSSQYNYGVTGGVV IHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLSVDT TQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDETG QQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQCH >gi|299856441|gb|ADWV01000010.1| GENE 120 127565 - 128227 310 220 aa, chain - ## HITS:1 COG:yraI KEGG:ns NR:ns ## COG: yraI COG3121 # Protein_GI_number: 16131035 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 220 12 231 231 442 97.0 1e-124 MLCSFCIGQALAGGIVLQRTRVIYDASRKEAALPVANKGAETPYLLQSWVDNIDGTSRAP FIITPPLFRLEAGDDSSLRIFKTADNLPENKESLFYINVRAIPAKKKSDDVNANELTLVF KTRFKMFYRPAHLKGRVNDAWTSLEFKRSDHSLNIYNPTEYYVVFAGLAVDKTDLTSKIE YIAPGEHKQLPLPASGGKNVKWAAINDYGGSSGTETRPLQ >gi|299856441|gb|ADWV01000010.1| GENE 121 128340 - 128924 428 194 aa, chain - ## HITS:1 COG:ECs4020 KEGG:ns NR:ns ## COG: ECs4020 COG3539 # Protein_GI_number: 15833274 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 194 1 194 194 368 98.0 1e-102 MNKVTKTAIVGLLALFAGNAAATDGEIVFDGEILKSACEINDSDKKIEVALGHYNAEQFR SVGDRSPKIPFTIPLVNCPVTGWEHDNGNVEASFRLWLETRDNGTVPNFPNLAKVGSFAG TAATGVGIRIDDAESGNLMPLNAMGNDNTVYQIPADSNGIVNVDLIAYYVSTVEASEITP GEADAVVNVTLDYR >gi|299856441|gb|ADWV01000010.1| GENE 122 129324 - 130025 625 233 aa, chain - ## HITS:1 COG:agaI KEGG:ns NR:ns ## COG: agaI COG0363 # Protein_GI_number: 16131033 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Escherichia coli K12 # 1 233 19 251 251 453 97.0 1e-127 MQTLQQVENYTALSERASEYLLAVIRSKPDAVICLATGATPLLTYHYLVEKIHQQQVDIS QLTFVKLDEWVDLPLTMPGTCETFLQQHIVQPLGLREDQLISFRSEEINETECERVTNLI ARKGGLDLCVLGLGKNGHLGLNEPGESLQPACHISQLDARTQQHEMLKTTGRPVTRGITL GLKDILNAREVLLLVTGEGKQDATERFLTAKVSTAIPASFLWLHSNFICLINT >gi|299856441|gb|ADWV01000010.1| GENE 123 130080 - 130871 889 263 aa, chain - ## HITS:1 COG:ECs4019 KEGG:ns NR:ns ## COG: ECs4019 COG3716 # Protein_GI_number: 15833273 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 1 263 1 263 263 504 100.0 1e-143 MGSEISKKDITRLGFRSSLLQASFNYERMQAGGFTWAMLPILKKIYKDDKPGLSAAMKDN LEFINTHPNLVGFLMGLLISMEEKGENRDTIKGLKVALFGPIAGIGDAIFWFTLLPIMAG ICSSFASQGNLLGPILFFAVYLLIFFLRVGWTHVGYSVGVKAIDKVRENSQMIARSATIL GITVIGGLIASYVHINVVTSFAIDSTHSVALQQDFFDKVFPNILPMAYTLLMYYFLRVKK AHPVLLIGVTFVLSIVCSAFGIL >gi|299856441|gb|ADWV01000010.1| GENE 124 130861 - 131664 798 267 aa, chain - ## HITS:1 COG:agaC KEGG:ns NR:ns ## COG: agaC COG3715 # Protein_GI_number: 16131031 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli K12 # 1 267 1 267 267 479 100.0 1e-135 MHEITLLQGLSLAALVFVLGIDFWLEALFLFRPIIVCTLTGAILGDIQTGLITGGLTELA FAGLTPAGGVQPPNPIMAGLMTTVIAWSTGVDAKTAIGLGLPFSLLMQYVILFFYSAFSL FMTKADKCAKEADTAAFSRLNWTTMLIVASAYAVIAFLCTYLAQGAMQALVKAMPAWLTH GFEVAGGILPAVGFGLLLRVMFKAQYIPYLIAGFLFVCYIQVSNLLPVAVLGAGFAVYEF FNAKSRQQAQPQPVASKNEEEDYSNGI >gi|299856441|gb|ADWV01000010.1| GENE 125 131703 - 132179 607 158 aa, chain - ## HITS:1 COG:ECs4018 KEGG:ns NR:ns ## COG: ECs4018 COG3444 # Protein_GI_number: 15833272 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 279 98.0 1e-75 MSSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDDIQQKLMGITAETYGFG IRFFTIEKTINVIGKAAPHQKIFLICRTPQTVRKLVEGGIDLKDINVGNMHFSEGKKQIS SKVYVDDQDLADLRFIKQRGVNVFIQDVPGDQKEQIPD >gi|299856441|gb|ADWV01000010.1| GENE 126 132346 - 133206 854 286 aa, chain - ## HITS:1 COG:ECs4017 KEGG:ns NR:ns ## COG: ECs4017 COG0191 # Protein_GI_number: 15833271 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 577 100.0 1e-165 MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALE EIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSV VDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAH GLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFA GAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRISA >gi|299856441|gb|ADWV01000010.1| GENE 127 133219 - 134373 989 384 aa, chain - ## HITS:1 COG:agaS KEGG:ns NR:ns ## COG: agaS COG2222 # Protein_GI_number: 16131028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Escherichia coli K12 # 1 384 1 384 384 769 99.0 0 MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTG AGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESV AAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMM ASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAAR ESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDNETLVVVFVSSHPYTRQYDLDLLAELR RDNQAMRVIAIAAESTDIVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNT PDTPSASGTVNRVVQGVIIHPWQA >gi|299856441|gb|ADWV01000010.1| GENE 128 134724 - 135857 1006 377 aa, chain - ## HITS:1 COG:ECs4015 KEGG:ns NR:ns ## COG: ECs4015 COG1820 # Protein_GI_number: 15833269 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Escherichia coli O157:H7 # 1 377 8 384 384 723 98.0 0 MTHVLRARRLLTEEGWLDDHQLRIADGVIAAIEPIPVGVTERDAELLCPAYIDTHVHGGA GVDVMDDAPDVLDKLAMHKAREGVGSWLPTTVTAPLNSIHAALKRIAQRCQRGGPGAQVL GSYLEGPYFTPQNKGAHPPELFRELEIAELDQLIAVSQHTLRVVALAPEKEGALQAIRHL KQQNVRVMLGHSAATWQQTRAAFDAGADGLVHCYNGMTGLHHREPGMVGAGLTDKRAWLE LIADGHHVHPAAMSLCCCCAKERIVLITDAMQAAGMPDGRYTLCGEEVQMHGGVVRTASG GLAGSTLSVDAAVRNMVELTGVTPAEAIHMASLHPARMLGVDGVLGSLKPGKRASIVALD SGLHVQQIWIQSQLASF >gi|299856441|gb|ADWV01000010.1| GENE 129 135854 - 136288 560 144 aa, chain - ## HITS:1 COG:ECs4014 KEGG:ns NR:ns ## COG: ECs4014 COG2893 # Protein_GI_number: 15833268 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 144 1 144 144 256 100.0 1e-68 MLSIILTGHGGFASGMEKAMKQILGEQSQFIAIDFPETSSTALLTSQLEEAIAQLDCEDG IVFLTDLLGGTPFRVASTLAMQKPGCEVITGTNLQLLLEMVLEREGLSGEEFRVQALECG HRGLTSLVDELGRCHEECPVEEGI >gi|299856441|gb|ADWV01000010.1| GENE 130 136306 - 137184 1127 292 aa, chain - ## HITS:1 COG:ECs4013 KEGG:ns NR:ns ## COG: ECs4013 COG3716 # Protein_GI_number: 15833267 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 1 292 1 292 292 558 99.0 1e-159 MASNQTTLPNVSENEETLLTGVNENVYEDQSIGAELTKKDINRVAWRSMLLQASFNYERM QASGWLYGLLPALKKIHTNKRDLARAMKGHMGFFNTHPFLVTFVIGIILAMERSKQDVNS IQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGASLALQGSILGAVVFILLFNVVHLGLRF GLAHYAYRMGVAAIPLIKANTKKVGHAASIVGMTVIGALVATYVRLSTTLEITAGDAVVK LQTDVIDKLMPAFLPLVYTLTMFWLVRRGWSPLRLIAVTVVLGIVGKFCHFL >gi|299856441|gb|ADWV01000010.1| GENE 131 137174 - 137953 1057 259 aa, chain - ## HITS:1 COG:ECs4012 KEGG:ns NR:ns ## COG: ECs4012 COG3715 # Protein_GI_number: 15833266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 259 1 259 259 429 100.0 1e-120 MEISLLQAFALGIIAFIAGLDMFNGLTHMHRPVVLGPLVGLVLGDLHTGILTGGTLELVW MGLAPLAGAQPPNVIIGTIVGTAFAITTGVKPDVAVGVAVPFAVAVQMGITFLFSVMSGV MSRCDRMAENADTRGIERVNYLALLALGTFYFLCAFLPIYFGAEHAKTIIDVLPQRLIDG LGVAGGIMPAIGFAVLLKIMMKNVYIPYFILGFVAAAWLKLPVLAIAAAALAMALIDLLR KSPEPTQPAAQKEEFEDGI >gi|299856441|gb|ADWV01000010.1| GENE 132 137964 - 138437 593 157 aa, chain - ## HITS:1 COG:ZagaV KEGG:ns NR:ns ## COG: ZagaV COG3444 # Protein_GI_number: 15803671 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 EDL933 # 1 157 13 169 169 305 99.0 2e-83 MPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQQNLMEMVLAEGIAVRF WTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMHYANGKQQIAKTV SVDAGDIAAFNDLKAAGVECFVQGVPTEPAVDLFKLL >gi|299856441|gb|ADWV01000010.1| GENE 133 138460 - 139740 1358 426 aa, chain - ## HITS:1 COG:agaZ KEGG:ns NR:ns ## COG: agaZ COG4573 # Protein_GI_number: 16131024 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted tagatose 6-phosphate kinase # Organism: Escherichia coli K12 # 1 426 1 426 426 860 99.0 0 MKHLTEMVRQHKAGKTNGIYAVCSAHPLVLEAAIRYASANQTPLLIEATSNQVDQFGGYT GMTPADFRGFVCQLADSLNFPQDALILGGDHLGPNRWQNLPAAQAMANADDLIKSYVAAG FKKIHLDCSMSCQDDPIPLTDDIVAERAARLAKVAEETCLEHFGEADLEYVIGTEVPVPG GAHETLSELAVTTPDAARATLEAHRHAFEKQGLNAIWPRIIALVVQPGVEFDHTNVIDYQ PAKASALSQMVENYETLIFEAHSTDYQTPQSLRQLVIDHFAILKVGPALTFALREALFSL AAIEEELVPAKACSGLRQVLEDVMLDRPEYWQSHYHGDGNARRLARGYSYSDRVRYYWPD SQIDDAFAHLVRNLADSPIPLPLISQYLPLQYVKVRSGELQPTPRELIINHIQDILAQYY TACEGQ >gi|299856441|gb|ADWV01000010.1| GENE 134 139989 - 140798 732 269 aa, chain + ## HITS:1 COG:ECs4009 KEGG:ns NR:ns ## COG: ECs4009 COG1349 # Protein_GI_number: 15833263 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 269 1 269 269 492 100.0 1e-139 MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGI AVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAAVELIQPGHRVILDSGTTTFE IARLMRKHTDVIAMTNGMNVANALLEAEGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHF DMLFLGVDAIDLERGVSTHNEDEARLNRRMCEVAERIIVVTDSSKFNRSSLHKIIDTQRI DMIIVDEGIPADSLEGLRKAGVEVILVGE >gi|299856441|gb|ADWV01000010.1| GENE 135 140853 - 141317 218 154 aa, chain - ## HITS:1 COG:no KEGG:ECSE_3414 NR:ns ## KEGG: ECSE_3414 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 154 1 154 154 311 100.0 6e-84 MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKAATKLLAVVHKVIEEHI TVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRFFFRYSEKEKVIILGWMNDENTLRTY GKKTDAYTVFSKMLKRGHPPADWESLTQETEENH >gi|299856441|gb|ADWV01000010.1| GENE 136 141317 - 141652 237 111 aa, chain - ## HITS:1 COG:sohA KEGG:ns NR:ns ## COG: sohA COG2002 # Protein_GI_number: 16131021 # Func_class: K Transcription # Function: Regulators of stationary/sporulation gene expression # Organism: Escherichia coli K12 # 1 111 1 111 111 216 100.0 8e-57 MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDE QEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE >gi|299856441|gb|ADWV01000010.1| GENE 137 141801 - 143372 1393 523 aa, chain - ## HITS:1 COG:yhaG KEGG:ns NR:ns ## COG: yhaG COG2721 # Protein_GI_number: 16131020 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Escherichia coli K12 # 1 523 1 523 523 1054 99.0 0 MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDI PANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTLPLATKVPAPLPPLEGYTF EGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCG VAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLVGTDDVQAIPVESASI VSLQDEKHVGFQSMVEDILQVAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTAN PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGK TDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDF VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEE TIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT >gi|299856441|gb|ADWV01000010.1| GENE 138 143747 - 145081 1676 444 aa, chain + ## HITS:1 COG:ECs4005 KEGG:ns NR:ns ## COG: ECs4005 COG0477 # Protein_GI_number: 15833259 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 444 1 444 444 828 100.0 0 MILDTVDEKKKGVHTRYLILLIIFIVTAVNYADRATLSIAGTEVAKELQLSAVSMGYIFS AFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGISMFFMRF MLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLTFAWGWEHV FTVMGVIGFVLTALWIKLIHNPTDHPRMSAEELKFISENGAVVDMDHKKPGSAAASGPKL HYIKQLLSNRMMLGVFFGQYFINTITWFFLTWFPIYLVQEKGMSILKVGLVASIPALCGF AGGVLGGVFSDYLIKRGLSLTLARKLPIVLGMLLASTIILCNYTNNTTLVVMLMALAFFG KGFGALGWPVISDTAPKEIVGLCGGVFNVFGNVASIVTPLVIGYLVSELHSFNAALVFVG CSALMAMVCYLFVVGDIKRMELQK >gi|299856441|gb|ADWV01000010.1| GENE 139 145097 - 145867 844 256 aa, chain + ## HITS:1 COG:ECs4004 KEGG:ns NR:ns ## COG: ECs4004 COG3836 # Protein_GI_number: 15833258 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Escherichia coli O157:H7 # 1 256 1 256 256 504 100.0 1e-143 MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIP QLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAEQAVASTRYPPEGI RGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDL AAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAPVEADARRYLEWGATFVAVGSDL GVFRSATQKLADTFKK >gi|299856441|gb|ADWV01000010.1| GENE 140 145897 - 146787 1194 296 aa, chain + ## HITS:1 COG:ECs4003 KEGG:ns NR:ns ## COG: ECs4003 COG2084 # Protein_GI_number: 15833257 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli O157:H7 # 1 296 4 299 299 513 100.0 1e-145 MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCD VIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDA PVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVA LNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIK DLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSALACYYEKLAKVEVTR >gi|299856441|gb|ADWV01000010.1| GENE 141 146884 - 148029 1067 381 aa, chain + ## HITS:1 COG:ECs4002 KEGG:ns NR:ns ## COG: ECs4002 COG1929 # Protein_GI_number: 15833256 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Escherichia coli O157:H7 # 1 381 28 408 408 673 99.0 0 MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSIPVADGGEGTVEAMIAATQGSE RHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAEKRDPLVTTSRGTGELILQ ALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNEIGFGGGSLNTLNDIDISGLD PRLKDCVIRVACDVTNPLVGDNGASRIFGPQKGASEAMIVELDNNLSHYADVIKKALHVD VKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTALNLEEHIHDCTLVITGEGRIDSQSI HGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVHQHGIDAVFSVLTSIGTLDEAFRGAYD NICRASRNIAATLAIGMRNAG Prediction of potential genes in microbial genomes Time: Sun May 15 15:28:16 2011 Seq name: gi|299856440|gb|ADWV01000011.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont10.1, whole genome shotgun sequence Length of sequence - 147144 bp Number of predicted genes - 132, with homology - 132 Number of transcription units - 69, operones - 32 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 31 - 1576 99.0 # CP001063 [R:2772744..2775646] # 23S ribosomal RNA # Shigella boydii CDC 3083-94 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella. + 5S_RRNA 1657 - 1787 99.0 # EU285519 [D:5957..6097] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. + Prom 1993 - 2052 5.7 1 1 Tu 1 . + CDS 2112 - 3410 931 ## COG0477 Permeases of the major facilitator superfamily 2 2 Op 1 3/0.767 - CDS 3407 - 3730 269 ## COG5544 Predicted periplasmic lipoprotein - Term 3737 - 3774 3.7 3 2 Op 2 3/0.767 - CDS 3776 - 5131 1429 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 4 3 Op 1 3/0.767 - CDS 5245 - 7905 2384 ## COG1042 Acyl-CoA synthetase (NDP forming) 5 3 Op 2 3/0.767 - CDS 7937 - 8461 506 ## COG3148 Uncharacterized conserved protein - Term 8665 - 8697 6.3 6 4 Tu 1 . - CDS 8704 - 9123 178 ## PROTEIN SUPPORTED gi|124485582|ref|YP_001030198.1| ribosomal protein L12E/L44/L45/RPP1/RPP2-like protein - Prom 9182 - 9241 6.1 + Prom 9131 - 9190 3.2 7 5 Tu 1 . + CDS 9330 - 10367 1013 ## COG0566 rRNA methylases + Term 10546 - 10586 0.1 - Term 10361 - 10400 5.1 8 6 Tu 1 . - CDS 10415 - 11104 703 ## COG0692 Uracil DNA glycosylase - Prom 11340 - 11399 6.2 + Prom 11166 - 11225 7.3 9 7 Tu 1 . + CDS 11409 - 11792 527 ## COG3445 Acid-induced glycyl radical enzyme + Term 11815 - 11850 7.4 - Term 11803 - 11838 7.4 10 8 Tu 1 . - CDS 11847 - 12434 510 ## COG1280 Putative threonine efflux protein - Prom 12488 - 12547 3.9 + Prom 12434 - 12493 3.5 11 9 Tu 1 . + CDS 12537 - 13418 444 ## COG0583 Transcriptional regulator + Term 13422 - 13462 3.9 - Term 13410 - 13448 7.1 12 10 Tu 1 . - CDS 13451 - 14785 1538 ## COG0513 Superfamily II DNA and RNA helicases - Prom 14917 - 14976 4.2 + Prom 14819 - 14878 2.4 13 11 Tu 1 . + CDS 14917 - 15654 722 ## COG4123 Predicted O-methyltransferase + Term 15819 - 15856 -0.9 14 12 Tu 1 . - CDS 15639 - 17261 1168 ## COG0029 Aspartate oxidase - Prom 17500 - 17559 5.1 + Prom 17392 - 17451 5.0 15 13 Op 1 11/0.033 + CDS 17669 - 18244 348 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 16 13 Op 2 10/0.033 + CDS 18277 - 18927 564 ## COG3073 Negative regulator of sigma E activity 17 13 Op 3 8/0.033 + CDS 18927 - 19883 804 ## COG3026 Negative regulator of sigma E activity 18 13 Op 4 4/0.633 + CDS 19880 - 20359 364 ## COG3086 Positive regulator of sigma E activity + Term 20370 - 20414 -0.9 + Prom 20413 - 20472 5.6 19 14 Op 1 14/0.000 + CDS 20557 - 22356 2042 ## COG0481 Membrane GTPase LepA 20 14 Op 2 13/0.000 + CDS 22372 - 23346 978 ## COG0681 Signal peptidase I + Term 23360 - 23405 14.1 + Prom 23398 - 23457 1.8 21 15 Op 1 18/0.000 + CDS 23619 - 24299 647 ## COG0571 dsRNA-specific ribonuclease 22 15 Op 2 16/0.000 + CDS 24296 - 25201 1099 ## COG1159 GTPase 23 15 Op 3 9/0.033 + CDS 25213 - 25941 641 ## COG1381 Recombinational DNA repair protein (RecF pathway) 24 15 Op 4 8/0.033 + CDS 25953 - 26684 1028 ## COG0854 Pyridoxal phosphate biosynthesis protein 25 15 Op 5 . + CDS 26684 - 27064 291 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) + Term 27082 - 27142 12.4 - Term 27563 - 27620 6.1 26 16 Op 1 1/0.967 - CDS 27758 - 28018 269 ## COG1145 Ferredoxin 27 16 Op 2 . - CDS 28074 - 28922 758 ## COG1737 Transcriptional regulators + Prom 29029 - 29088 3.4 28 17 Op 1 2/0.867 + CDS 29131 - 29766 536 ## COG0560 Phosphoserine phosphatase 29 17 Op 2 . + CDS 29824 - 30327 474 ## COG0590 Cytosine/adenosine deaminases 30 18 Tu 1 . - CDS 30324 - 31880 1761 ## COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein - Prom 32028 - 32087 4.0 31 19 Tu 1 . + CDS 32141 - 36025 4548 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Term 36104 - 36133 0.4 32 20 Tu 1 . + CDS 36601 - 38028 1001 ## COG0642 Signal transduction histidine kinase + Prom 38106 - 38165 2.4 33 21 Op 1 . + CDS 38193 - 38906 430 ## EcE24377A_2840 hypothetical protein 34 21 Op 2 4/0.633 + CDS 38896 - 40230 1263 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 35 21 Op 3 . + CDS 40291 - 40629 522 ## COG0347 Nitrogen regulatory protein PII 36 22 Tu 1 . - CDS 40674 - 41864 1308 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Prom 41902 - 41961 7.3 + Prom 42068 - 42127 5.6 37 23 Tu 1 . + CDS 42192 - 43445 1579 ## COG0112 Glycine/serine hydroxymethyltransferase + Term 43472 - 43501 2.1 - Term 43460 - 43489 2.1 38 24 Tu 1 . - CDS 43509 - 44702 1165 ## COG1940 Transcriptional regulator/sugar kinase - Prom 44727 - 44786 3.6 + Prom 44616 - 44675 2.9 39 25 Tu 1 . + CDS 44820 - 48101 3110 ## EcE24377A_2834 TPR repeat-containing protein + Prom 48110 - 48169 9.9 40 26 Op 1 16/0.000 + CDS 48198 - 49181 1127 ## COG1879 ABC-type sugar transport system, periplasmic component 41 26 Op 2 21/0.000 + CDS 49204 - 50715 176 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 42 26 Op 3 3/0.767 + CDS 50740 - 51738 1166 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 43 26 Op 4 2/0.867 + CDS 51813 - 52865 1049 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 44 26 Op 5 . + CDS 52877 - 53749 777 ## COG2017 Galactose mutarotase and related enzymes + Term 53759 - 53803 3.2 - Term 53745 - 53792 7.7 45 27 Op 1 1/0.967 - CDS 53797 - 54219 492 ## COG2259 Predicted membrane protein 46 27 Op 2 6/0.167 - CDS 54316 - 55518 998 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 47 27 Op 3 3/0.767 - CDS 55528 - 56340 849 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 48 27 Op 4 4/0.633 - CDS 56337 - 56657 157 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 49 27 Op 5 6/0.167 - CDS 56657 - 57175 418 ## COG5517 Small subunit of phenylpropionate dioxygenase 50 27 Op 6 . - CDS 57172 - 58533 1284 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - Prom 58582 - 58641 2.2 + Prom 58491 - 58550 5.4 51 28 Tu 1 . + CDS 58669 - 59559 756 ## COG0583 Transcriptional regulator + Prom 59602 - 59661 2.1 52 29 Tu 1 . + CDS 59719 - 60858 939 ## COG0477 Permeases of the major facilitator superfamily + Term 61022 - 61086 -0.8 53 30 Tu 1 . - CDS 60850 - 62130 840 ## COG3711 Transcriptional antiterminator - Prom 62236 - 62295 3.9 54 31 Tu 1 . - CDS 62321 - 63175 725 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 63213 - 63272 2.0 - Term 63262 - 63286 -1.0 55 32 Tu 1 . - CDS 63320 - 64123 1063 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family - Prom 64159 - 64218 3.9 56 33 Tu 1 . + CDS 64242 - 64979 1025 ## COG0565 rRNA methylase + Prom 65186 - 65245 4.7 57 34 Op 1 13/0.000 + CDS 65280 - 65768 552 ## COG1959 Predicted transcriptional regulator 58 34 Op 2 20/0.000 + CDS 65880 - 67094 1704 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 59 34 Op 3 14/0.000 + CDS 67122 - 67508 595 ## COG0822 NifU homolog involved in Fe-S cluster formation 60 34 Op 4 10/0.033 + CDS 67525 - 67848 471 ## COG0316 Uncharacterized conserved protein + Term 67864 - 67903 5.0 61 35 Op 1 11/0.033 + CDS 67944 - 68459 621 ## COG1076 DnaJ-domain-containing proteins 1 62 35 Op 2 13/0.000 + CDS 68476 - 70326 2410 ## COG0443 Molecular chaperone 63 35 Op 3 9/0.033 + CDS 70328 - 70663 430 ## COG0633 Ferredoxin 64 35 Op 4 2/0.867 + CDS 70675 - 70875 381 ## COG2975 Uncharacterized protein conserved in bacteria + Term 71010 - 71041 3.9 + Prom 70896 - 70955 1.8 65 36 Tu 1 . + CDS 71053 - 72336 1573 ## COG0260 Leucyl aminopeptidase + Prom 72367 - 72426 7.1 66 37 Tu 1 . + CDS 72478 - 73254 663 ## ECIAI1_2574 enhanced serine sensitivity protein SseB + Term 73329 - 73355 1.0 - Term 73690 - 73731 9.0 67 38 Tu 1 . - CDS 73747 - 74592 844 ## COG2897 Rhodanese-related sulfurtransferase - Prom 74749 - 74808 2.7 + Prom 74702 - 74761 4.2 68 39 Op 1 7/0.067 + CDS 74799 - 79760 4553 ## COG2373 Large extracellular alpha-helical protein 69 39 Op 2 1/0.967 + CDS 79761 - 82073 1365 ## COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC + Prom 82113 - 82172 3.7 70 40 Op 1 . + CDS 82222 - 82653 538 ## COG0105 Nucleoside diphosphate kinase + Prom 82657 - 82716 2.5 71 40 Op 2 . + CDS 82803 - 83957 1404 ## COG0820 Predicted Fe-S-cluster redox enzyme + Term 83964 - 84009 10.3 + Prom 84094 - 84153 6.0 72 41 Op 1 10/0.033 + CDS 84242 - 85255 636 ## COG1426 Uncharacterized protein conserved in bacteria 73 41 Op 2 11/0.033 + CDS 85282 - 86400 1241 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis + Term 86410 - 86441 4.5 74 42 Op 1 12/0.000 + CDS 86511 - 87785 1533 ## COG0124 Histidyl-tRNA synthetase 75 42 Op 2 9/0.033 + CDS 87803 - 88423 695 ## COG2976 Uncharacterized protein conserved in bacteria 76 42 Op 3 7/0.067 + CDS 88434 - 89612 1168 ## COG1520 FOG: WD40-like repeat + Term 89633 - 89674 10.4 + Prom 89635 - 89694 1.8 77 43 Op 1 . + CDS 89730 - 91202 2023 ## COG1160 Predicted GTPases 78 43 Op 2 . + CDS 91271 - 91486 104 ## S2728 hypothetical protein 79 44 Tu 1 . - CDS 91483 - 92853 1159 ## COG1570 Exonuclease VII, large subunit - Prom 92888 - 92947 5.0 + Prom 92919 - 92978 6.7 80 45 Op 1 13/0.000 + CDS 93015 - 94481 1786 ## COG0516 IMP dehydrogenase/GMP reductase + Term 94488 - 94523 6.1 81 45 Op 2 . + CDS 94550 - 96127 1983 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 96158 - 96189 3.4 - Term 96137 - 96184 6.9 82 46 Op 1 . - CDS 96222 - 96761 594 ## ECP_2508 hypothetical protein 83 46 Op 2 . - CDS 96777 - 97292 396 ## SSON_2587 putative outer membrane lipoprotein - Prom 97414 - 97473 9.0 - Term 97511 - 97552 2.2 84 47 Tu 1 . - CDS 97606 - 97797 139 ## EcSMS35_2653 hypothetical protein - Prom 97899 - 97958 7.7 + Prom 97404 - 97463 8.6 85 48 Tu 1 . + CDS 97642 - 97932 128 ## EC55989_2789 hypothetical protein + Term 97973 - 98023 1.5 + Prom 97953 - 98012 6.5 86 49 Tu 1 . + CDS 98149 - 100392 1521 ## COG2200 FOG: EAL domain + Term 100598 - 100645 2.1 - Term 100385 - 100425 10.3 87 50 Op 1 11/0.033 - CDS 100431 - 101972 1485 ## COG0248 Exopolyphosphatase 88 50 Op 2 4/0.633 - CDS 101977 - 104043 2058 ## COG0855 Polyphosphate kinase - Prom 104079 - 104138 2.8 - Term 104166 - 104197 2.4 89 51 Op 1 21/0.000 - CDS 104214 - 104852 719 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 90 51 Op 2 . - CDS 104852 - 105889 1243 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase - Prom 105933 - 105992 7.0 + Prom 106119 - 106178 7.5 91 52 Op 1 5/0.333 + CDS 106214 - 106840 842 ## COG0035 Uracil phosphoribosyltransferase + Term 106859 - 106891 3.1 + Prom 106842 - 106901 7.5 92 52 Op 2 6/0.167 + CDS 106926 - 108215 1017 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Prom 108222 - 108281 3.7 93 53 Tu 1 . + CDS 108334 - 109011 640 ## COG0593 ATPase involved in DNA replication initiation 94 54 Op 1 6/0.167 - CDS 109149 - 109508 533 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 95 54 Op 2 . - CDS 109529 - 110992 1723 ## COG4783 Putative Zn-dependent protease, contains TPR repeats - Prom 111061 - 111120 3.1 + Prom 111076 - 111135 4.5 96 55 Tu 1 . + CDS 111205 - 112266 1388 ## COG0628 Predicted permease + Term 112270 - 112311 7.3 - Term 112333 - 112368 -0.7 97 56 Op 1 1/0.967 - CDS 112420 - 113151 338 ## COG2116 Formate/nitrite family of transporters 98 56 Op 2 . - CDS 113173 - 115185 1563 ## COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains 99 56 Op 3 . - CDS 115215 - 115628 332 ## EC55989_2775 putative processing element hydrogenase 4 100 56 Op 4 6/0.167 - CDS 115621 - 116379 494 ## COG3260 Ni,Fe-hydrogenase III small subunit 101 56 Op 5 5/0.333 - CDS 116376 - 116921 357 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 102 56 Op 6 7/0.067 - CDS 116931 - 118646 1908 ## COG3261 Ni,Fe-hydrogenase III large subunit 103 56 Op 7 5/0.333 - CDS 118636 - 119841 1014 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 104 56 Op 8 5/0.333 - CDS 119848 - 119985 123 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 105 56 Op 9 7/0.067 - CDS 119961 - 120215 95 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 106 56 Op 10 3/0.767 - CDS 120220 - 120870 658 ## COG4237 Hydrogenase 4 membrane component (E) 107 56 Op 11 1/0.967 - CDS 120882 - 121247 285 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 108 56 Op 12 1/0.967 - CDS 121283 - 121738 266 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 109 56 Op 13 1/0.967 - CDS 121657 - 122025 78 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 110 57 Op 1 10/0.033 - CDS 122128 - 123075 907 ## COG0650 Formate hydrogenlyase subunit 4 111 57 Op 2 5/0.333 - CDS 123086 - 124318 974 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit - Prom 124340 - 124399 2.8 112 58 Op 1 4/0.633 - CDS 124432 - 125103 489 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 113 58 Op 2 1/0.967 - CDS 125103 - 125720 322 ## COG1142 Fe-S-cluster-containing hydrogenase components 2 - Prom 125762 - 125821 3.4 114 59 Op 1 4/0.633 - CDS 125973 - 126443 543 ## COG1225 Peroxiredoxin 115 59 Op 2 . - CDS 126443 - 127015 380 ## COG2716 Glycine cleavage system regulatory protein - Prom 127044 - 127103 6.0 + Prom 126903 - 126962 3.0 116 60 Op 1 9/0.033 + CDS 127161 - 128039 822 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 117 60 Op 2 1/0.967 + CDS 128056 - 129090 874 ## COG3317 Uncharacterized lipoprotein + Term 129098 - 129129 3.2 118 61 Tu 1 . + CDS 129303 - 130016 1154 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase + Term 130037 - 130074 8.0 + Prom 130081 - 130140 6.9 119 62 Op 1 7/0.067 + CDS 130170 - 130397 272 ## COG4456 Virulence-associated protein and related proteins 120 62 Op 2 . + CDS 130397 - 130795 182 ## COG1487 Predicted nucleic acid-binding protein, contains PIN domain + Prom 130836 - 130895 2.1 121 63 Op 1 4/0.633 + CDS 130942 - 131805 857 ## COG2321 Predicted metalloprotease 122 63 Op 2 . + CDS 131859 - 133835 1435 ## COG1444 Predicted P-loop ATPase fused to an acetyltransferase 123 63 Op 3 . + CDS 133909 - 134607 836 ## COG0400 Predicted esterase 124 64 Op 1 . - CDS 134688 - 134888 331 ## G2583_2995 hypothetical protein 125 64 Op 2 9/0.033 - CDS 134916 - 136043 1174 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 126 64 Op 3 3/0.767 - CDS 136047 - 136403 365 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 136449 - 136508 5.7 - Term 136889 - 136937 7.5 127 65 Tu 1 . - CDS 136942 - 140055 3276 ## COG0841 Cation/multidrug efflux pump - Prom 140155 - 140214 4.7 128 66 Tu 1 . - CDS 140219 - 141919 1235 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific - Prom 141997 - 142056 2.8 + Prom 141979 - 142038 2.3 129 67 Op 1 3/0.767 + CDS 142125 - 144104 1504 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 130 67 Op 2 . + CDS 144172 - 144747 703 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 131 68 Tu 1 . + CDS 144873 - 145916 695 ## ECO103_2975 hypothetical protein - Term 145939 - 145996 5.5 132 69 Tu 1 . - CDS 146012 - 147142 1203 ## COG0021 Transketolase Predicted protein(s) >gi|299856440|gb|ADWV01000011.1| GENE 1 2112 - 3410 931 432 aa, chain + ## HITS:1 COG:kgtP KEGG:ns NR:ns ## COG: kgtP COG0477 # Protein_GI_number: 16130512 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 432 1 432 432 751 99.0 0 MVESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTT QLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCMMCFGSLVIACLPGYETIG TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV VVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRALKEAGSLKGLWR NRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIG ALSDKIGRRTSMLCFGSLAAIFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGIL KAEMFPAQVRALGVGLSYAVANAIFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVS LMLHRKGKGMRL >gi|299856440|gb|ADWV01000011.1| GENE 2 3407 - 3730 269 107 aa, chain - ## HITS:1 COG:STM2653 KEGG:ns NR:ns ## COG: STM2653 COG5544 # Protein_GI_number: 16765973 # Func_class: R General function prediction only # Function: Predicted periplasmic lipoprotein # Organism: Salmonella typhimurium LT2 # 1 107 1 107 107 155 76.0 2e-38 MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFG LMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH >gi|299856440|gb|ADWV01000011.1| GENE 3 3776 - 5131 1429 451 aa, chain - ## HITS:1 COG:ECs3452 KEGG:ns NR:ns ## COG: ECs3452 COG1502 # Protein_GI_number: 15832706 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Escherichia coli O157:H7 # 1 431 2 432 452 876 99.0 0 MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKIASAKQRICIVALYLEQ DDGGKGILNALYEAKRQRPELDVRVLVDWHRAQRGRIGAAASNTNADWYCRMAQENPGVD VPVYGIPINTREALGVLHFKGFIIDDSVLYSGASLNDVYLHQHDKYRYDRYHLIRNRKMS DIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLFRQELRDAAYHFQGDADNDQLSV TPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNLPAILVRNIIQLLREGKKVEIIVGD KTANDFYIPEDEPFKIIGALPYLYEINLRRFLSRLQYYVNTDQLVVRLWKDDDNTYHLKG MWVDDKWMLITGNNLNPRAWRLDLENAILIHDPQLELAPQREKELELIREHTTIVKHYRD LQSIADYPVKVRKLIRRLRRIRIDRLISRIL >gi|299856440|gb|ADWV01000011.1| GENE 4 5245 - 7905 2384 886 aa, chain - ## HITS:1 COG:ZyfiQ_1 KEGG:ns NR:ns ## COG: ZyfiQ_1 COG1042 # Protein_GI_number: 15803112 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Escherichia coli O157:H7 EDL933 # 1 709 1 709 709 1358 99.0 0 MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAW PDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMR LLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQREMGFSYFIAL GDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPA AQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAP AALALDALWSHNGKLATLSEETCQKLRDALPGHVAISNPLDLRDDASSEHYVKTLDILLH SQDFDALMVIHSPSAAAPATESAQELIEAVKHHPRSKYVSLLTNWCGEHSSQEARRLFSE AGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATS LDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVML YLRTANEVQQAANAIFDRVKMAWPQARIHGLLVQSMANRAGAQELRVVVEHDPVFGPLIM LGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQV SNLIVDCPEIQRLDIHPLLASGSEFTALDVTLDIAPFEGDNESRLAVRPYPHQLEEWVEL KNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMA FVAVRRIDQTEEILGVTRAISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGL QRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNLAQREES >gi|299856440|gb|ADWV01000011.1| GENE 5 7937 - 8461 506 174 aa, chain - ## HITS:1 COG:ECs3449 KEGG:ns NR:ns ## COG: ECs3449 COG3148 # Protein_GI_number: 15832703 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 174 67 240 240 342 98.0 3e-94 MFDTEPMKPSNTGRLIADILPDTVAFQWSRTDPSQDLLDLVQNPDYQPMVVFPASYADEQ REVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISVDLSRLSAYRLREAQAEG QYCTAEVAIALLDMAGDTGAAAGLGELFTRFKTRYLAGKTQHLGSITAEQLESV >gi|299856440|gb|ADWV01000011.1| GENE 6 8704 - 9123 178 139 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|124485582|ref|YP_001030198.1| ribosomal protein L12E/L44/L45/RPP1/RPP2-like protein [Methanocorpusculum labreanum Z] # 55 136 35 115 120 73 46 7e-12 MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGETLDKLLKDDLPVVIDFW APWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVD MLNGAVPKAPFDSWLNESL >gi|299856440|gb|ADWV01000011.1| GENE 7 9330 - 10367 1013 345 aa, chain + ## HITS:1 COG:ECs3447 KEGG:ns NR:ns ## COG: ECs3447 COG0566 # Protein_GI_number: 15832701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Escherichia coli O157:H7 # 1 345 1 345 345 672 100.0 0 MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA >gi|299856440|gb|ADWV01000011.1| GENE 8 10415 - 11104 703 229 aa, chain - ## HITS:1 COG:ung KEGG:ns NR:ns ## COG: ung COG0692 # Protein_GI_number: 16130505 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Escherichia coli K12 # 1 229 1 229 229 466 100.0 1e-131 MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVI LGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVL LLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRH HVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPIDWMPVLPAESE >gi|299856440|gb|ADWV01000011.1| GENE 9 11409 - 11792 527 127 aa, chain + ## HITS:1 COG:ECs3445 KEGG:ns NR:ns ## COG: ECs3445 COG3445 # Protein_GI_number: 15832699 # Func_class: R General function prediction only # Function: Acid-induced glycyl radical enzyme # Organism: Escherichia coli O157:H7 # 1 127 1 127 127 243 100.0 9e-65 MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVVAVSKLGDIEYREVPVE VKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIA RTFTESL >gi|299856440|gb|ADWV01000011.1| GENE 10 11847 - 12434 510 195 aa, chain - ## HITS:1 COG:yfiK KEGG:ns NR:ns ## COG: yfiK COG1280 # Protein_GI_number: 16130503 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli K12 # 1 195 1 195 195 329 99.0 2e-90 MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGI SFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKI ILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGRQLNI VLALLLIYCAVRIFY >gi|299856440|gb|ADWV01000011.1| GENE 11 12537 - 13418 444 293 aa, chain + ## HITS:1 COG:yfiE KEGG:ns NR:ns ## COG: yfiE COG0583 # Protein_GI_number: 16130502 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 293 16 308 308 558 96.0 1e-159 MDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQEFSVQLFEKIGRRMCLTRE GKKLLPHIYELTRVMDTLREAAKKESDPDGELRVVSGETLLSYRMPQVLQRFRQRAPKVR LSLQSLNCYVIRDALLNDEADVGVFYRVGNDDVLNRRELGEQPLVLVASPQIADIDFTEP GRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIELISIESIKRCVAANIGVSYLPRF AVGNELASGELIELPFGEQTQTITAMCAHHAGKAVSPAMHTFIQCVEECFVAG >gi|299856440|gb|ADWV01000011.1| GENE 12 13451 - 14785 1538 444 aa, chain - ## HITS:1 COG:ECs3442 KEGG:ns NR:ns ## COG: ECs3442 COG0513 # Protein_GI_number: 15832696 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 444 1 444 444 778 99.0 0 MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW RKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLV HLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLL GKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAKRAEKKKVKEKEKPRVKKRH RDTKNIGKRRKPSGTGVPPQTTEE >gi|299856440|gb|ADWV01000011.1| GENE 13 14917 - 15654 722 245 aa, chain + ## HITS:1 COG:yfiC KEGG:ns NR:ns ## COG: yfiC COG4123 # Protein_GI_number: 16130500 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Escherichia coli K12 # 1 245 41 285 285 507 99.0 1e-144 MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVKRCLDIGAGSGLLAL MLAQRTDDSVIIDAVELESEAAAQAQENINQSPWAERINVHTADIQQWITQQTVRFDLII SNPPYYQQGVECATPQREQARYTTTLDHPSLLTCAAECITEEGFFCVVLPEQIGNGFTEL ALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGPDQNYSEAYTALTQA FYLFM >gi|299856440|gb|ADWV01000011.1| GENE 14 15639 - 17261 1168 540 aa, chain - ## HITS:1 COG:nadB KEGG:ns NR:ns ## COG: nadB COG0029 # Protein_GI_number: 16130499 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Escherichia coli K12 # 1 540 1 540 540 1121 98.0 0 MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDET DSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHVQPNGEESYHLTR EGGHSHRRILHAADATGREVQSTLVSKAQNHPNIRVLERSNAVDLIVSDKIGLPGTRRVV GAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEF NQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHE MKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQEPIPIVPAAHYTCGGVMVD DHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMPYAHGVSTLP PWDESRVENPDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEYYAH FRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPELLTHSGPSILSPGNHYINR >gi|299856440|gb|ADWV01000011.1| GENE 15 17669 - 18244 348 191 aa, chain + ## HITS:1 COG:ECs3439 KEGG:ns NR:ns ## COG: ECs3439 COG1595 # Protein_GI_number: 15832693 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 360 100.0 1e-100 MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQEAFIKAYRA LDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPEN LMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA IDNKVQPLIRR >gi|299856440|gb|ADWV01000011.1| GENE 16 18277 - 18927 564 216 aa, chain + ## HITS:1 COG:rseA KEGG:ns NR:ns ## COG: rseA COG3073 # Protein_GI_number: 16130497 # Func_class: T Signal transduction mechanisms # Function: Negative regulator of sigma E activity # Organism: Escherichia coli K12 # 1 216 1 216 216 329 100.0 2e-90 MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVM AAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQH YNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDY ELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ >gi|299856440|gb|ADWV01000011.1| GENE 17 18927 - 19883 804 318 aa, chain + ## HITS:1 COG:ECs3437 KEGG:ns NR:ns ## COG: ECs3437 COG3026 # Protein_GI_number: 15832691 # Func_class: T Signal transduction mechanisms # Function: Negative regulator of sigma E activity # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 613 99.0 1e-175 MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYELSFISINKQGVESLRY RHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFK RLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDIESKLPMRVDLLDRDGETL EQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKAKFSWTPTWLPQGFSEVSSSRRP LPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQMLRTGRRTVSTSVRDNAEITIVGEL PPQTAKRIAENIKFGAAQ >gi|299856440|gb|ADWV01000011.1| GENE 18 19880 - 20359 364 159 aa, chain + ## HITS:1 COG:rseC KEGG:ns NR:ns ## COG: rseC COG3086 # Protein_GI_number: 16130495 # Func_class: T Signal transduction mechanisms # Function: Positive regulator of sigma E activity # Organism: Escherichia coli K12 # 1 159 1 159 159 294 100.0 5e-80 MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPCDEPLV PGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFASDVAALCGAILGGIGGFLI ARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ >gi|299856440|gb|ADWV01000011.1| GENE 19 20557 - 22356 2042 599 aa, chain + ## HITS:1 COG:ECs3435 KEGG:ns NR:ns ## COG: ECs3435 COG0481 # Protein_GI_number: 15832689 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Escherichia coli O157:H7 # 1 599 1 599 599 1167 100.0 0 MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVT LDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAM EMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVRCSAKTGVGVQDVLERLVRDI PPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLRKGDKVKVMSTGQTYNADRLGIF TPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTLARNPAEKALPGFKKVKPQVYAGLF PVSSDDYEAFRDALGKLSLNDASLFYEPESSSALGFGFRCGFLGLLHMEIIQERLEREYD LDLITTAPTVVYEVETTSREVIYVDSPSKLPAVNNIYELREPIAECHMLLPQAYLGNVIT LCVEKRGVQTNMVYHGNQVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASDM VRVDVLINGERVDALALITHRDNSQNRGRELVEKMKDLIPRQQFDIAIQAAIGTHIIARS TVKQLRKNVLAKCYGGDISRKKKLLQKQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK >gi|299856440|gb|ADWV01000011.1| GENE 20 22372 - 23346 978 324 aa, chain + ## HITS:1 COG:ECs3434 KEGG:ns NR:ns ## COG: ECs3434 COG0681 # Protein_GI_number: 15832688 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Escherichia coli O157:H7 # 1 324 1 324 324 651 100.0 0 MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGDSLDKATLKKVAPKPGW LETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTL IETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENA LPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILT VPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAI WMSFDKQEGEWPTGVRLSRIGGIH >gi|299856440|gb|ADWV01000011.1| GENE 21 23619 - 24299 647 226 aa, chain + ## HITS:1 COG:ECs3433 KEGG:ns NR:ns ## COG: ECs3433 COG0571 # Protein_GI_number: 15832687 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Escherichia coli O157:H7 # 1 226 1 226 226 422 100.0 1e-118 MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE >gi|299856440|gb|ADWV01000011.1| GENE 22 24296 - 25201 1099 301 aa, chain + ## HITS:1 COG:era KEGG:ns NR:ns ## COG: era COG1159 # Protein_GI_number: 16130491 # Func_class: R General function prediction only # Function: GTPase # Organism: Escherichia coli K12 # 1 301 1 301 301 599 99.0 1e-171 MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIY VDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLRDGKAPVI LAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHF PEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVERE GQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLGYVDD L >gi|299856440|gb|ADWV01000011.1| GENE 23 25213 - 25941 641 242 aa, chain + ## HITS:1 COG:ECs3431 KEGG:ns NR:ns ## COG: ECs3431 COG1381 # Protein_GI_number: 15832685 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 242 1 242 242 468 99.0 1e-132 MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRF GGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSL AGATGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASVVIDN KTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTH YE >gi|299856440|gb|ADWV01000011.1| GENE 24 25953 - 26684 1028 243 aa, chain + ## HITS:1 COG:ECs3430 KEGG:ns NR:ns ## COG: ECs3430 COG0854 # Protein_GI_number: 15832684 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal phosphate biosynthesis protein # Organism: Escherichia coli O157:H7 # 1 243 1 243 243 438 100.0 1e-123 MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRI LRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDAC KRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAAT FAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLMLE ARG >gi|299856440|gb|ADWV01000011.1| GENE 25 26684 - 27064 291 126 aa, chain + ## HITS:1 COG:acpS KEGG:ns NR:ns ## COG: acpS COG0736 # Protein_GI_number: 16130488 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Escherichia coli K12 # 1 126 1 126 126 237 98.0 5e-63 MAILGLGTDIVEIARIEAVIARSGERLARRVLSDNEWAIWKTHHQPVRFLAKRFAVKEAA AKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKLGVVNMHVTLADERHYACA TVIIES >gi|299856440|gb|ADWV01000011.1| GENE 26 27758 - 28018 269 86 aa, chain - ## HITS:1 COG:yfhL KEGG:ns NR:ns ## COG: yfhL COG1145 # Protein_GI_number: 16130487 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli K12 # 1 86 1 86 86 153 100.0 6e-38 MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGHYETPTCQKVCPIPNTI VKDPAHVETEEQLWDKFVLMHHADKI >gi|299856440|gb|ADWV01000011.1| GENE 27 28074 - 28922 758 282 aa, chain - ## HITS:1 COG:ECs3427 KEGG:ns NR:ns ## COG: ECs3427 COG1737 # Protein_GI_number: 15832681 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 282 25 306 306 525 100.0 1e-149 MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGY KGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEE KLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPD DLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSA SISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV >gi|299856440|gb|ADWV01000011.1| GENE 28 29131 - 29766 536 211 aa, chain + ## HITS:1 COG:STM2569 KEGG:ns NR:ns ## COG: STM2569 COG0560 # Protein_GI_number: 16765889 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Salmonella typhimurium LT2 # 1 211 1 211 211 365 91.0 1e-101 MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAAR WPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITG SPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYS GYSDSNQDNPLLYFCQHRWRVTPRGELQQLE >gi|299856440|gb|ADWV01000011.1| GENE 29 29824 - 30327 474 167 aa, chain + ## HITS:1 COG:yfhC KEGG:ns NR:ns ## COG: yfhC COG0590 # Protein_GI_number: 16130484 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Escherichia coli K12 # 1 167 12 178 178 337 99.0 5e-93 MSEVEFSHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEI MALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDV LHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQKKAQSSTD >gi|299856440|gb|ADWV01000011.1| GENE 30 30324 - 31880 1761 518 aa, chain - ## HITS:1 COG:yfhD KEGG:ns NR:ns ## COG: yfhD COG4623 # Protein_GI_number: 16130483 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein # Organism: Escherichia coli K12 # 47 518 1 472 472 912 99.0 0 MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGELRVSTIHTPLTYNEIN GKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNADLLAAGLVYNSERVKNYQ PGPTYYSVSQQLVYKVGQYRPRTLGNLTAEQLTVAPGHVVVNDLQTLKDTKFPELSWKVD DKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELAVALDITDEQPVTWFSPLDGDNT LSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVDTRTFLRAVDAVLPQLKPLFEKYAE EIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLTKNTAQSLGITDRTDAEQSISGGVRYL QDMMSKVPESVPENERIWFALAAYNMGYAHMLDARALTAKTKGNPDSWADVKQRLPLLSQ KPYYSKLTYGYARGHEAYAYVENIRKYQISLVGYLQEKEKQATEAAMQLAQDYPAVSPTE LGKEKFPFLSFLSQSSSNYLTHSPSLLFSRKGSEEKQN >gi|299856440|gb|ADWV01000011.1| GENE 31 32141 - 36025 4548 1294 aa, chain + ## HITS:1 COG:ECs3423_1 KEGG:ns NR:ns ## COG: ECs3423_1 COG0046 # Protein_GI_number: 15832677 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Escherichia coli O157:H7 # 1 984 2 985 985 2000 99.0 0 MEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLNAPLNDDEHAQLERLLKY GPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQVNRLERGVAYYIEAGTLTN EQWQQVTAELHDRMMETVFFALDDAEQLFAHHQPTPVTSVDLLGQGRQALIDANLRLGLA LAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCRHKIFNADWVIDGEQQPKSLFKMI KNTFETTPDYVLSAYKDNAAVMEGSEVGRYFADHETGRYDFHQEPAHILMKVETHNHPTA ISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEEDFGKPERIVT ALDIMTEGPLGGAAFNNEFGRPALNGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIR ADHVQKGEINVGAKLVVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRC QEVIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILNDEPGMSPLE IWCNESQERYVLAVAADQLPLFDELCKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLP LDVLLGKTPKMTRDVQTLKAKGDALAREGITIADAVKRVLHLPTVAEKTFLVTIGDRSVT GMVARDQMVGPWQVPVANCAVTTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALT NIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSM KTRWQEGNEEREMTSPLSLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGAT ALAQVYRQLGDKPADVRDVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAG HCGIDADIATLGDDRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVSG DRFVITANGQTVFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKL SFDINEDVAAPYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTG LEDFHALVACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMM SNLRELIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRV EVRDAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITSITTESGRVTIMMPHP ERVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG >gi|299856440|gb|ADWV01000011.1| GENE 32 36601 - 38028 1001 475 aa, chain + ## HITS:1 COG:ECs3422 KEGG:ns NR:ns ## COG: ECs3422 COG0642 # Protein_GI_number: 15832676 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 475 22 496 496 870 99.0 0 MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQAALVNRTTLIDARRSEA MTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHAGVLPDDKLYQALRQDLNN LAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSRGQQLQREIAERGQYFGWQSL VLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLGNSVSFSGPSELRSVGQRILWLS ERLSWLESQRHQFLRHLSHELKTPLASMREGTELLADQVVGPLTPEQKEVVSILDSSSRN LQKLIEQLLDYNRKQADSAVELENVELAPLVETVVSAHSLPARAKMMHTDVDLKATACLA EPMLLMSVLDNLYSNAVHYGAESGNICLRSSLHGARVYIDVINTGTPIPQEERAMIFEPF FQGSHQRKGAVKGSGLGLSIARDCIRRMQGELYLVDESGQDVCFRIELPSSKNTK >gi|299856440|gb|ADWV01000011.1| GENE 33 38193 - 38906 430 237 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_2840 NR:ns ## KEGG: EcE24377A_2840 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 237 3 239 239 417 100.0 1e-115 MRHIFQRLLPRRLWLAGLPCLALLGCVQSHNKPAIDTPAEEKIPVYQLADYLSTECSDIW ALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGSWQNTFKQGILLADAKITPYE RRQLVARIDALSTEIPAQVRPLYQLWRDGQALQLQLAEERQRYGKLQQASDSELDTLRQQ HHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTPHEGEKPAPSTHEVTPDEP >gi|299856440|gb|ADWV01000011.1| GENE 34 38896 - 40230 1263 444 aa, chain + ## HITS:1 COG:ECs3420 KEGG:ns NR:ns ## COG: ECs3420 COG2204 # Protein_GI_number: 15832674 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli O157:H7 # 1 444 1 444 444 835 99.0 0 MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMD EMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDA LEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIHNA SPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDM PAPLQVKLLRVLQERKVRPLGSNRDIDIDVRIISATHRDLPKAMARGEFREDLYYRLNVV SLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVI EQCVALTSSPVISDALVEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAARM AGRNRTEFYKLLSRHELDANDFKE >gi|299856440|gb|ADWV01000011.1| GENE 35 40291 - 40629 522 112 aa, chain + ## HITS:1 COG:ECs3419 KEGG:ns NR:ns ## COG: ECs3419 COG0347 # Protein_GI_number: 15832673 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 191 100.0 4e-49 MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVK IEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI >gi|299856440|gb|ADWV01000011.1| GENE 36 40674 - 41864 1308 396 aa, chain - ## HITS:1 COG:hmp_2 KEGG:ns NR:ns ## COG: hmp_2 COG1018 # Protein_GI_number: 16130477 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 150 396 1 247 247 517 100.0 1e-146 MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNMSNQRNGDQREALFNA IAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHLLATLDEMFSPGQEVLDAW GKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAKTPRSALITSFELEPVDGGAV AEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVG DVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAENGD VHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSEGLMDLSKLEGAFSDPTMQFY LCGPVGFMQFTAKQLVDLGVKQENIHYECFGPHKVL >gi|299856440|gb|ADWV01000011.1| GENE 37 42192 - 43445 1579 417 aa, chain + ## HITS:1 COG:glyA KEGG:ns NR:ns ## COG: glyA COG0112 # Protein_GI_number: 16130476 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Escherichia coli K12 # 1 417 1 417 417 811 100.0 0 MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMN LAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGV VDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL AKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVE VFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS GIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIERIKGKVLDICARYPVYA >gi|299856440|gb|ADWV01000011.1| GENE 38 43509 - 44702 1165 397 aa, chain - ## HITS:1 COG:ECs3416 KEGG:ns NR:ns ## COG: ECs3416 COG1940 # Protein_GI_number: 15832670 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Escherichia coli O157:H7 # 1 397 3 399 399 814 99.0 0 MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNILQELESEKRVVNI DDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACLSPKGEFEYLQIDAPTPQA LLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQTMPQAPWTTPVEVKYLLEEKL GIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGH TIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVNTQLDPEKLTTAQLIAAWQS GEPWITSWVDRSANAIGLSLYNFLNILNINQIWLYGRSCAFGENWLNTIIRQTGFNPFDR DEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI >gi|299856440|gb|ADWV01000011.1| GENE 39 44820 - 48101 3110 1093 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_2834 NR:ns ## KEGG: EcE24377A_2834 # Name: not_defined # Def: TPR repeat-containing protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 1093 32 1124 1124 2215 99.0 0 MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYGVTDTLSEQKTLKSWQA VWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPALVGLLGPWISGGIEFNWP QHHRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHGLQVMTGFTLRPDRAALEIASRVYNG NATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKRAVSAFPIATGTYYKVDYSAGVD ISRYKNVPVPTSYMAEKSQYDFVGAWCHDEDGGLLHVANHHIAPGKKQWSWGHSEFGQAW DKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEEKRFEQYFLPYHSLGMVQNASRDAVIK LQRSERGIEWGLYAISPLNGYRLAIREIGKCNALLDDAVALMPATAIQGVLHGINPERLT IELSDADGNIVLSYQEHQPQELPLPDVAKAPLSAQDITSTDEAWFIGQHLEQYHHASRSP FDYYLRGVALDPLDYRCNLALAMLEYNRADFPQAVAYATQALKRAHALNKNPQCGQASLI RASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLARLAARNGNFDAGLDFCQQSLRACP TNQEVLCLHNLLLVLSGRQDNARVQREKLLRDYPLNATLWWLNWFDGRSESALAQWRGLC QGRDVNALMTAGQLINWGMPTLATEMLNALDCQRTLSLYLQASLLPKAERGELVAKAIDV FPQFVRFPNTLEEVAALESIEECWFARHLLACFYYNKRSYNKAITLWQSCVEMSPEFADG WRGLAIHAWNKQHDYELAARYLDNAYQLAPQDARLLFERDLLDKLSGATPEKRLARLENN LEIALKRDDMTAELLNLWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQ HLDARQPQQASELLHAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDETEAMRCLRL AAIGDRTINIHSYYNDQPVDYLFWQGMALRLLGEQQTAQQLFSEMKQWAQEMAKTSIEAD FFAVSQPDLLSLYGDLQQQHKEKCLMVAMLASAGLGEVAQYESARAELTAINPAWPKAAL FTTVMPFIFNYVH >gi|299856440|gb|ADWV01000011.1| GENE 40 48198 - 49181 1127 327 aa, chain + ## HITS:1 COG:ECs3414 KEGG:ns NR:ns ## COG: ECs3414 COG1879 # Protein_GI_number: 15832668 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 605 100.0 1e-173 MPKKMRTTRNLLLMATLLGSALFARAADKEMTIGAIYLDTQGYYAGVRQGVQDAAKDSSV QVQLIETNAQGDISKESTFVDTLVARNVDAIILSAVSENGSSRTVRRASEAGIPVICYNT CINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQPKIAVINCEAFEVCVQRRK GFEEVLKSRVPGAQIVANQEGTVLDKAISVGEKLIISTPDLNAIMGESGGATLGAVKAVR NQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEK VIQVPIDLYTKTEDGKQWLATHVDGLP >gi|299856440|gb|ADWV01000011.1| GENE 41 49204 - 50715 176 503 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 262 480 7 219 318 72 25 1e-11 MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSE RPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRNGM IDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSL ASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHH IVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKPKLEDISFTLRRGEVLGIAGLLGAG RSELLKAIVGLEEYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAGIIPWLGVDEN TVLTNRQKISANGVLQWSTIRRLTEEVMQRMTVKAASSETPIGTLSGGNQQKVVIGRWVY AASQILLLDEPTRGVDIEAKQQIYRIVRELAAEGKSVVFISSEVEELPLVCDRILLLQHG TFSQEFHSPVNVDELMSAILSVH >gi|299856440|gb|ADWV01000011.1| GENE 42 50740 - 51738 1166 332 aa, chain + ## HITS:1 COG:ECs3412 KEGG:ns NR:ns ## COG: ECs3412 COG1172 # Protein_GI_number: 15832666 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 332 1 332 332 489 98.0 1e-138 MSASSLSLPQGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNAPGFISLNNQMNVLRDA ATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEVPLAVACLLVLLLGALMGT LAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSAL IMIVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGIL LAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGI NSFFQQVVRGVIIVVAVLANILLTQRSSKAKR >gi|299856440|gb|ADWV01000011.1| GENE 43 51813 - 52865 1049 350 aa, chain + ## HITS:1 COG:yphC KEGG:ns NR:ns ## COG: yphC COG1063 # Protein_GI_number: 16130470 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 350 15 364 364 723 99.0 0 MLAAYLPGNSTVDLREVAVPTPGINQVLIKMKSSGICGSDVHYIYHQHRATAAAPDKPLY QGFINGHEPCGQIVAMGQGCRHFKEGDRVLVYHISGCGFCPNCRRGFPISCTGKGKAAYG WQRDGGHAEYLLAEEKDLILLPDALSYEDGAFISCGVGTAYEGILRGEVSGSDNVLVVGL GPVGMMAMMLAKGRGAKRIIGVDMLPERLAMAKQLGVMDHGYLATTEGLPQIIAELTHGG ADVALDCSGNAAGRLLALQSTADWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLF HMEKCAHDLTDWKLWPRNAITHRFSLEQAGDAYALMASGKCGKVVINFPD >gi|299856440|gb|ADWV01000011.1| GENE 44 52877 - 53749 777 290 aa, chain + ## HITS:1 COG:yphB KEGG:ns NR:ns ## COG: yphB COG2017 # Protein_GI_number: 16130469 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli K12 # 1 290 1 290 290 590 98.0 1e-169 MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGN RFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAF HLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCE QLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPA FDKGYAFDFFCLEPMSHAPDDHHRPEGGDLLALAPGESTTSEMSLRVALL >gi|299856440|gb|ADWV01000011.1| GENE 45 53797 - 54219 492 140 aa, chain - ## HITS:1 COG:yphA KEGG:ns NR:ns ## COG: yphA COG2259 # Protein_GI_number: 16130468 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 140 25 164 164 236 100.0 7e-63 MNTLRYFDFGAARPVLLLIARIAVVLIFIIFGFPKMMGFDGTVQYMASLGAPMPMLAAII AVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMINFWKNVSI AGAFLLLAITGPGAISLDRR >gi|299856440|gb|ADWV01000011.1| GENE 46 54316 - 55518 998 400 aa, chain - ## HITS:1 COG:ECs3408 KEGG:ns NR:ns ## COG: ECs3408 COG0446 # Protein_GI_number: 15832662 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 747 97.0 0 MKEKTIIIVGGGQAAAMAAASLRQQGFTGELHLFSDERHLPYERPPLSKSMLLEDSPQLQ QVLPANWWQENNVHLHSGVTIKTLGRDTRELVLTNGESWHWDQLFIATGAAARPLPLLDA LGERCFTLRHAGDAARLREVLQPERSVVIVGAGTIGLELAASATQRRCKVTVIELAATVM GRNAPPPVQRYLLQRHQQAGVRILLNNAIEHVVDGEKVELTLQSGETLQADVVIYGIGIS ANEQLAREANLDTANGIVIDEACRTCDPAIFAGGDVAITRLDNGALHRCESWENANNQAQ IAAAAMLGLPLPLLPPPWFWSDQYSDNLQFIGDMRGDDWLCRGNPETQKAIWFNLQNGVL IGAVTLNQGREIRPIRKWIQSGKTFDAKLLIDENIALKSL >gi|299856440|gb|ADWV01000011.1| GENE 47 55528 - 56340 849 270 aa, chain - ## HITS:1 COG:hcaB KEGG:ns NR:ns ## COG: hcaB COG1028 # Protein_GI_number: 16130466 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 270 1 270 270 507 99.0 1e-144 MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGN VTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGY LLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRV NGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLASRR NNRALSGVMINADAGLAIRGIRHVAAGLDL >gi|299856440|gb|ADWV01000011.1| GENE 48 56337 - 56657 157 106 aa, chain - ## HITS:1 COG:ECs3406 KEGG:ns NR:ns ## COG: ECs3406 COG2146 # Protein_GI_number: 15832660 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Escherichia coli O157:H7 # 1 106 1 106 106 209 100.0 1e-54 MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGYLEDDATV ECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGGDIFIDLPEAQP >gi|299856440|gb|ADWV01000011.1| GENE 49 56657 - 57175 418 172 aa, chain - ## HITS:1 COG:hcaA2 KEGG:ns NR:ns ## COG: hcaA2 COG5517 # Protein_GI_number: 16130464 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Small subunit of phenylpropionate dioxygenase # Organism: Escherichia coli K12 # 1 172 1 172 172 320 100.0 1e-87 MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQ PPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYL LYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF >gi|299856440|gb|ADWV01000011.1| GENE 50 57172 - 58533 1284 453 aa, chain - ## HITS:1 COG:ECs3404 KEGG:ns NR:ns ## COG: ECs3404 COG4638 # Protein_GI_number: 15832658 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Escherichia coli O157:H7 # 1 453 1 453 453 952 100.0 0 MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWLFLAHESQIPKPGDFFN TYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELID VPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSAPGLRDYLGDIAWYLDGMLDR REGGTEIVGGVQKWVINCNWKFPAEQFASDQYHALFSHASAVQVLGAKDDGSDKRLGDGQ TARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWVDGAVSSYYRETYAEAEQRLGEVRA LRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVEVWAFCITDKAASDEVKAAFENSATRA FGPAGFLEQDDSENWCEIQKLLKGHRARNSKLCLEMGLGQEKRRDDGIPGITNYIFSETA ARGMYQRWADLLSSESWQEVLDKTAAYQQEVMK >gi|299856440|gb|ADWV01000011.1| GENE 51 58669 - 59559 756 296 aa, chain + ## HITS:1 COG:ECs3403 KEGG:ns NR:ns ## COG: ECs3403 COG0583 # Protein_GI_number: 15832657 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 568 100.0 1e-162 MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA GECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTL IELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHEKEI TAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGVTL IPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFIAIVQERLASVTA >gi|299856440|gb|ADWV01000011.1| GENE 52 59719 - 60858 939 379 aa, chain + ## HITS:1 COG:hcaT KEGG:ns NR:ns ## COG: hcaT COG0477 # Protein_GI_number: 16130461 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 379 1 379 379 636 100.0 0 MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLLLGAGLVARFLGSLLIA PRVSDPSRLISALRVLALLTLLFAVAFWAGAHVAWLMLVMIGFNLFFSPLVPLTDALANT WQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYRVILALLTLGVASMLLGFLIRPTI QPQGASRQQESTGWSAWLALVRQNWRFLACVCLLQGAHAAYYGFSAIYWQAAGYSASAVG YLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAICGVVRWGIMGATTALPWLIVVQILH CGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVAMGGSIAIMTVFAGFLYQYLGHGVFWV MALVALPAMFLRPKVVPSC >gi|299856440|gb|ADWV01000011.1| GENE 53 60850 - 62130 840 426 aa, chain - ## HITS:1 COG:ECs3401 KEGG:ns NR:ns ## COG: ECs3401 COG3711 # Protein_GI_number: 15832655 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli O157:H7 # 1 426 8 433 433 805 98.0 0 MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATTATFSELNGVDDDIASLDISATGQEILR YHQLTLTAGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSHFTPALKSELKRRGIA RNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAE SCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKR LVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSFFAIGIDNTLPEEFARLYPRLVRTTR AALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLR ELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIR KMLESA >gi|299856440|gb|ADWV01000011.1| GENE 54 62321 - 63175 725 284 aa, chain - ## HITS:1 COG:yfhR KEGG:ns NR:ns ## COG: yfhR COG1073 # Protein_GI_number: 16130459 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli K12 # 1 284 10 293 293 587 100.0 1e-168 MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGT RLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSK GTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILD STFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYS LAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN >gi|299856440|gb|ADWV01000011.1| GENE 55 63320 - 64123 1063 267 aa, chain - ## HITS:1 COG:ECs3399 KEGG:ns NR:ns ## COG: ECs3399 COG0483 # Protein_GI_number: 15832653 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Escherichia coli O157:H7 # 1 267 1 267 267 530 100.0 1e-150 MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYP QHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPM RNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECA DFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTG NIVAGNPRVVKAMLANMRDELSDALKR >gi|299856440|gb|ADWV01000011.1| GENE 56 64242 - 64979 1025 245 aa, chain + ## HITS:1 COG:ECs3398 KEGG:ns NR:ns ## COG: ECs3398 COG0565 # Protein_GI_number: 15832652 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 482 100.0 1e-136 MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNA HIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGL TNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLV DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN KGNKA >gi|299856440|gb|ADWV01000011.1| GENE 57 65280 - 65768 552 162 aa, chain + ## HITS:1 COG:ECs3397 KEGG:ns NR:ns ## COG: ECs3397 COG1959 # Protein_GI_number: 15832651 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 276 99.0 9e-75 MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRG PGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGDKCLTHALWRDLSDRLTGF LNNITLGELVNNQEVLDVSGRQHTHDAPRTRIQDAIDVKLRA >gi|299856440|gb|ADWV01000011.1| GENE 58 65880 - 67094 1704 404 aa, chain + ## HITS:1 COG:ECs3396 KEGG:ns NR:ns ## COG: ECs3396 COG1104 # Protein_GI_number: 15832650 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Escherichia coli O157:H7 # 1 404 9 412 412 820 100.0 0 MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIAD LVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFE VTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVD ATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGHERGMR SGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNI LNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRF TTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQGVDLNSIEWAHH >gi|299856440|gb|ADWV01000011.1| GENE 59 67122 - 67508 595 128 aa, chain + ## HITS:1 COG:ECs3395 KEGG:ns NR:ns ## COG: ECs3395 COG0822 # Protein_GI_number: 15832649 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Escherichia coli O157:H7 # 1 128 1 128 128 237 100.0 4e-63 MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKT YGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIAD YKSKREAK >gi|299856440|gb|ADWV01000011.1| GENE 60 67525 - 67848 471 107 aa, chain + ## HITS:1 COG:ECs3394 KEGG:ns NR:ns ## COG: ECs3394 COG0316 # Protein_GI_number: 15832648 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 107 1 107 107 207 100.0 3e-54 MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGV KVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESFHV >gi|299856440|gb|ADWV01000011.1| GENE 61 67944 - 68459 621 171 aa, chain + ## HITS:1 COG:ECs3393 KEGG:ns NR:ns ## COG: ECs3393 COG1076 # Protein_GI_number: 15832647 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Escherichia coli O157:H7 # 1 171 1 171 171 269 99.0 2e-72 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQT LRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKR VKKMFDTRHQLMVEQLDNEAWDAAADTVRKLRFLDKLRSSAEQLEEKLLDF >gi|299856440|gb|ADWV01000011.1| GENE 62 68476 - 70326 2410 616 aa, chain + ## HITS:1 COG:ECs3392 KEGG:ns NR:ns ## COG: ECs3392 COG0443 # Protein_GI_number: 15832646 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli O157:H7 # 1 616 1 616 616 1090 100.0 0 MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETLADHEGRHLLPSVVHYQ QQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPHLPYQFQASENGLPMIETA AGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYFDDAQRQGTKDAARLAGLHVL RLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDD FDHLLADYIREQAGIPDRSDNRVQRELLDAAIAAKIALSDADSVTVNVAGWQGEISREQF NELIAPLVKRTLLACRRALKDAGVEADEVLEVVMVGGSTRVPLVRERVGEFFGRPPLTSI DPDKVVAIGAAIQADILVGNKPDSEMLLLDVIPLSLGLETMGGLVEKVIPRNTTIPVARA QDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQVDADGL LSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVL ESLHGALAADAALLSAAERQVIDDAAAHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRM DQSVRRALKGHSVDEV >gi|299856440|gb|ADWV01000011.1| GENE 63 70328 - 70663 430 111 aa, chain + ## HITS:1 COG:ECs3391 KEGG:ns NR:ns ## COG: ECs3391 COG0633 # Protein_GI_number: 15832645 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 207 100.0 3e-54 MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFD SLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPRYTINHAREH >gi|299856440|gb|ADWV01000011.1| GENE 64 70675 - 70875 381 66 aa, chain + ## HITS:1 COG:ECs3390 KEGG:ns NR:ns ## COG: ECs3390 COG2975 # Protein_GI_number: 15832644 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 66 1 66 66 114 100.0 5e-26 MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLV WLDEAE >gi|299856440|gb|ADWV01000011.1| GENE 65 71053 - 72336 1573 427 aa, chain + ## HITS:1 COG:ECs3389 KEGG:ns NR:ns ## COG: ECs3389 COG0260 # Protein_GI_number: 15832643 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Escherichia coli O157:H7 # 1 427 30 456 456 854 99.0 0 MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLIQRAARKIDGLGIKHVQ LSGEGWDADRCWAFWQGYKAPKGTRKVEWPDLDDAQRQELDNRLMIIDWVRDTINAPAEE LGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGLHTVGRGSERSPVLLALDYNP TGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSDMGGAATVTGALAFAITRGLNKR VKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNTDAEGRLVLADGLIDASAQKPEMII DAATLTGAAKTALGNDYHALFSFDDALAGRLLASASQENEPFWRLPLAEFHRSQLPSNFA ELNNTGSAAYPAGASTAAGFLSHFVENYQQGWLHIDCSATYRKAPVEQWSAGATGLGVRT IANLLTA >gi|299856440|gb|ADWV01000011.1| GENE 66 72478 - 73254 663 258 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_2574 NR:ns ## KEGG: ECIAI1_2574 # Name: sseB # Def: enhanced serine sensitivity protein SseB # Organism: E.coli_IAI1 # Pathway: not_defined # 1 258 1 258 258 483 100.0 1e-135 MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGEAVVEDSALDLQHWEKE DGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETLFLNAKLPTGKEFMPREIS LLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTTLFKTIKSVKRAFICSIKENE EAQPNLLIGIEADGDIEEIIQATGSVATDTLPGDEPIDICQVKKGEKGISHFITEHIVPF YERRWGGFLRDFKQNRII >gi|299856440|gb|ADWV01000011.1| GENE 67 73747 - 74592 844 281 aa, chain - ## HITS:1 COG:sseA KEGG:ns NR:ns ## COG: sseA COG2897 # Protein_GI_number: 16130446 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 281 54 334 334 569 100.0 1e-162 MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSD HTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILG GGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARF NAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGS GVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK >gi|299856440|gb|ADWV01000011.1| GENE 68 74799 - 79760 4553 1653 aa, chain + ## HITS:1 COG:yfhM KEGG:ns NR:ns ## COG: yfhM COG2373 # Protein_GI_number: 16130445 # Func_class: R General function prediction only # Function: Large extracellular alpha-helical protein # Organism: Escherichia coli K12 # 1 1653 1 1653 1653 3224 99.0 0 MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSENASSAKLSVPERQKLAQ QSAGKVLTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIHVVDKKSGKVDGAWELSDN LKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDYEKTITTRDIQPSVGFASRGSLLPGK VVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRNSLANWQSDKLLQMADLVYTGRF DLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAGRYDYSNPATLFTLSDIGVSAHRYH NRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQATSDAQGHVQLENDKNAALLLARKDGQ TTLLDLKLPALDLAEFNIAGAPGYSKQFFMFGPRDLYRPGETVILNGLLRDADGKALPNQ PIKLDVIKPDGQVLRSVVSQPENGLYHFTWPLDSNAATGMWHIRANTGDNQYRMWDFHVE DFMPERMALNLTGEKTPLTPKDEVKFSVVGYYLYGAPANGNTLQGQLFLRPLREAVSALP GFEFGDIAAENLSRTLDEVQLTLDDKGRGEVSTESQWKETHSPLQVIFQGSLLESGGRPV TRRAEQAIWPADALPGIRPQFASKSVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKK AVSGLQVRLIRERRDYYWNWSEDEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGA YRLEVKAPNEAVSSVRFWAGYSWQDNSDGSGAVRPDRVTLKLDKASYRPGDTIKLHIAAP TAGKGYAMVESSEGPLWWQEIDVRAQGLDLTIPVDKTWNRHDLYLSTLVVRPGDKSRSAT PKRAVGVLHLPLGDENRRLDLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVD SGVLNITDYVTPDPWQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKP PVNHVNIVAQQALPVTLNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAP VIAELNMPRFMASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSDSPAAVELAPGVR TTLFIPVRALPGYGDGEIQATISGLALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQP GETWAIPADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLY TNAAQLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVMDF LVRAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQ KAPLGALREIWEHRADAASGLPLLQLGVALKTMGDATRGEEAIVLALKTPRNSDERIWLG DYGSPLRDNALMLSLLEENKLLPDEQYTLLNTLSQQAFGERWLSTQESNALFLAARTIQD LPGKWQAQTSFSAEPLTGEKTLNSNLNSDQLATLQVRNSGDQPLWLRMDASGYPQSAPLP ANNVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLPAGLELENQ NLANGSASLEQSGGEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPVTLVYLARAVT PGTYQVPQPMVESMYVPQWRATGAAEDLLIVRP >gi|299856440|gb|ADWV01000011.1| GENE 69 79761 - 82073 1365 770 aa, chain + ## HITS:1 COG:pbpC KEGG:ns NR:ns ## COG: pbpC COG4953 # Protein_GI_number: 16130444 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein PbpC # Organism: Escherichia coli K12 # 1 770 1 770 770 1479 99.0 0 MPRLLTKRGCWITLAAAPFLLFLAAWGADKLWPLPLHEVNPARVVVAQDGTPLWRFADAD GIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARAAWQDLTSGRVISGGSTLT MQVARLLDPHPKTFGGKIRQLWRALQLEWHLSKREILTLYLNRAPFGGTLQGIGAASWAY LGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAARNKVLERMAVQGVWSREQVKES REEPIWLAPRQMSQLAPLFSRMMLGKSKSDKIVTTLDAGLQRRLEELAQNWKGRLPPRSS LAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMVNAIRSPGSVLKPFVYGLALDEGLIHP ASLLQDVPRRTGDYRPGNFDSGFHGPISMSEALVRSLNLPAVQVLEAYGPKRFAAKLRNV GLPLYLPNGAAPNLSLILGGAGAKLEDMAAAYTAFARHGKAGKLRLQPDDPLLERPLMSS GAAWIIRRIMADEAKPLPDSALPRVAPLAWKTGTSYGYRDAWAIGVNARYVIGIWTGRPD GTPVVGQFGFASAVPLLNQVNNILLSRSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNC RRRLATWLLDGSQPPTLLLPEQEGINGIRFPIWLDENGKRVAADCPQARQEMINVWPLPL EPWLPASERRAVRLPPASTICPPYGHDAKLPLQLTGVRDGAIIKRLPGAAEATLPLQSSG GAGERWWFLNGEPLTERGRNVTLHLTDKGDYQLLVMDDVGQIATVKFVMQ >gi|299856440|gb|ADWV01000011.1| GENE 70 82222 - 82653 538 143 aa, chain + ## HITS:1 COG:ECs3380 KEGG:ns NR:ns ## COG: ECs3380 COG0105 # Protein_GI_number: 15832634 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Escherichia coli O157:H7 # 1 143 1 143 143 277 100.0 4e-75 MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFF DGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSD SVESAAREIAYFFGEGEVCPRTR >gi|299856440|gb|ADWV01000011.1| GENE 71 82803 - 83957 1404 384 aa, chain + ## HITS:1 COG:yfgB KEGG:ns NR:ns ## COG: yfgB COG0820 # Protein_GI_number: 16130442 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Escherichia coli K12 # 1 384 1 384 384 790 100.0 0 MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEM TDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVS SQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGE PLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDE IRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK DTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAG DVIDRTKRTLRKRMQGEAIDIKAV >gi|299856440|gb|ADWV01000011.1| GENE 72 84242 - 85255 636 337 aa, chain + ## HITS:1 COG:ECs3378 KEGG:ns NR:ns ## COG: ECs3378 COG1426 # Protein_GI_number: 15832632 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 337 1 337 337 543 99.0 1e-154 MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTF LRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV LFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTP PASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTATTTPDGAAPLPT DQAGVTTPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGA PAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ >gi|299856440|gb|ADWV01000011.1| GENE 73 85282 - 86400 1241 372 aa, chain + ## HITS:1 COG:ECs3377 KEGG:ns NR:ns ## COG: ECs3377 COG0821 # Protein_GI_number: 15832631 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Escherichia coli O157:H7 # 1 372 1 372 372 709 99.0 0 MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVR VSVPTMDAAEAFKLIKQRVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRM VVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSV KASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSL AADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDV SIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVRKDRLDNNDMIDQLEARIRAKASQLD EARRIDVQQVEK >gi|299856440|gb|ADWV01000011.1| GENE 74 86511 - 87785 1533 424 aa, chain + ## HITS:1 COG:ECs3376 KEGG:ns NR:ns ## COG: ECs3376 COG0124 # Protein_GI_number: 15832630 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 424 1 424 424 860 100.0 0 MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVT DVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKG RYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARANYRDA LVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQALLNDAPALGDYLDEESREHFAGL CKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRAT PAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKL MTNHGGGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLR TLLG >gi|299856440|gb|ADWV01000011.1| GENE 75 87803 - 88423 695 206 aa, chain + ## HITS:1 COG:ECs3375 KEGG:ns NR:ns ## COG: ECs3375 COG2976 # Protein_GI_number: 15832629 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 344 99.0 5e-95 MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNSHQVDSARSASLAYQNA VTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTSD ENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIVADLRGEALLSKGDKQGARSA WEAGVKSDVTPALSEMMQMKINNLSI >gi|299856440|gb|ADWV01000011.1| GENE 76 88434 - 89612 1168 392 aa, chain + ## HITS:1 COG:yfgL KEGG:ns NR:ns ## COG: yfgL COG1520 # Protein_GI_number: 16130437 # Func_class: S Function unknown # Function: FOG: WD40-like repeat # Organism: Escherichia coli K12 # 13 392 13 392 392 719 99.0 0 MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTAWSTSVGSGIGNFY SNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGLTVSGG HVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGA VKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTE IDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVD QNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQ KVDSSGFQTEPVAADGKLLIQAKDGTVYSITR >gi|299856440|gb|ADWV01000011.1| GENE 77 89730 - 91202 2023 490 aa, chain + ## HITS:1 COG:ECs3373 KEGG:ns NR:ns ## COG: ECs3373 COG1160 # Protein_GI_number: 15832627 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Escherichia coli O157:H7 # 1 490 14 503 503 951 99.0 0 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGI DGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKT DGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAPQEEVDEDAEYWA QFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDS IYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAHEGISD QDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSG VGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIV VIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRIQFKEGENPYANKRNTLTPTQMRKRK RLMKHIKKNK >gi|299856440|gb|ADWV01000011.1| GENE 78 91271 - 91486 104 71 aa, chain + ## HITS:1 COG:no KEGG:S2728 NR:ns ## KEGG: S2728 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 71 13 83 83 127 97.0 1e-28 MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVLKACGAVDYFCQHGHGL ISKKRVEFVLA >gi|299856440|gb|ADWV01000011.1| GENE 79 91483 - 92853 1159 456 aa, chain - ## HITS:1 COG:xseA KEGG:ns NR:ns ## COG: xseA COG1570 # Protein_GI_number: 16130434 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Escherichia coli K12 # 1 456 1 456 456 814 99.0 0 MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRC AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAK LQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDD APGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHET DVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIH HRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQPKIHRA QTRIQQLEYRLAETLRVQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKV KQVKAGEMLTTRLEDGWIESEVKNIQPVKKSRKKVH >gi|299856440|gb|ADWV01000011.1| GENE 80 93015 - 94481 1786 488 aa, chain + ## HITS:1 COG:YPO2871_3 KEGG:ns NR:ns ## COG: YPO2871_3 COG0516 # Protein_GI_number: 16123063 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Yersinia pestis # 207 486 1 280 281 478 94.0 1e-134 MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDTVTEARLAIA LAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLPTTTLREVKELTERNGFAG YPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRV EKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAA GVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGGNVATAAGARALAEAGCSAVKVGIG PGSICTTRIVTGVGVPQITAVADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASAVMV GSMLAGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGR VAYKGRLKEIIHQQMGGLRSCMGLTGCGTIDELRTKAEFVRISGAGIQESHVHDVTITKE SPNYRLGS >gi|299856440|gb|ADWV01000011.1| GENE 81 94550 - 96127 1983 525 aa, chain + ## HITS:1 COG:ZguaA_2 KEGG:ns NR:ns ## COG: ZguaA_2 COG0519 # Protein_GI_number: 15803031 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Escherichia coli O157:H7 EDL933 # 207 525 1 319 319 658 99.0 0 MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGP ESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGYAQVEVVNDSA LVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVASTESCPFAIMANEEKRFYGVQF HPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAVARIREQVGDDKVILGLSGGVDS SVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAG ENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHN VGGLPKEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEY CDLLRRADAIFIEELRKADLYDKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDF MTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE >gi|299856440|gb|ADWV01000011.1| GENE 82 96222 - 96761 594 179 aa, chain - ## HITS:1 COG:no KEGG:ECP_2508 NR:ns ## KEGG: ECP_2508 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 179 1 179 179 176 99.0 3e-43 MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQHDEWVAERNREIQQEKQ RRANAQAAANKRAATAAANKKARQDKLDAEASADKKRDQSYEDELRSLEIQKQKLALAKE EARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGRDLMKSVGKAEENKSDSWFN >gi|299856440|gb|ADWV01000011.1| GENE 83 96777 - 97292 396 171 aa, chain - ## HITS:1 COG:no KEGG:SSON_2587 NR:ns ## KEGG: SSON_2587 # Name: not_defined # Def: putative outer membrane lipoprotein # Organism: S.sonnei # Pathway: not_defined # 1 171 2 172 172 266 100.0 3e-70 MKFKKCLLPVAMLASFTLAGCQSNADDHAADVYQTDQLNTKQETKTVNIISILPAKVAVD NSQNKRNAQAFGALIGAVAGGVIGHNVGSGSNSGTTAGAVGGGAVGAAAGSMVNDKTLVE GVSLTYKEGTKVYTSTQVGKECQFTTGLAVVITTTYNETRIQPNTKCPEKS >gi|299856440|gb|ADWV01000011.1| GENE 84 97606 - 97797 139 63 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_2653 NR:ns ## KEGG: EcSMS35_2653 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 63 1 63 63 94 100.0 8e-19 MSQATSMRKRHRFNSRMTRIVLLISFIFFFGRFIYSSVGAWQHHQSKKEAQQSTLSVESP VQR >gi|299856440|gb|ADWV01000011.1| GENE 85 97642 - 97932 128 96 aa, chain + ## HITS:1 COG:no KEGG:EC55989_2789 NR:ns ## KEGG: EC55989_2789 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 96 1 96 96 186 100.0 3e-46 MLSFFFALMVLPGTDGRVDKTAKEEDKADEQYDTGHATVKSVSFSHTGCLTHKRFLEVCP TLWTVLTLRHNRTKWSILRYVKKRQWIHILMLWKLI >gi|299856440|gb|ADWV01000011.1| GENE 86 98149 - 100392 1521 747 aa, chain + ## HITS:1 COG:Z3766_3 KEGG:ns NR:ns ## COG: Z3766_3 COG2200 # Protein_GI_number: 15803026 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli O157:H7 EDL933 # 476 747 1 272 272 557 99.0 1e-158 MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFF SWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIIFCWGGYRVFTPRRNNVSHGDTRL ISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGV PLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTI FSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSS SYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLR IPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITA LDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQR RGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELIG PDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVS QLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKN VNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMRVVAEYVENEEIREAVLSLGID YMQGYLIGKPQPLIDTLNEIEPIRESA >gi|299856440|gb|ADWV01000011.1| GENE 87 100431 - 101972 1485 513 aa, chain - ## HITS:1 COG:ECs3364 KEGG:ns NR:ns ## COG: ECs3364 COG0248 # Protein_GI_number: 15832618 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Escherichia coli O157:H7 # 1 513 1 513 513 1009 100.0 0 MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEE AMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNE EARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFPGG VINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASGTIKAAHEVLMEMGEKDGIITPE RLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREG VLYEMEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLE ALLRWAAMLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLMMATLVRYHRKAIKLDD LPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNA LVLLDLEKEQEYWEGVAGWRLKIEEESTPEIAA >gi|299856440|gb|ADWV01000011.1| GENE 88 101977 - 104043 2058 688 aa, chain - ## HITS:1 COG:ECs3363 KEGG:ns NR:ns ## COG: ECs3363 COG0855 # Protein_GI_number: 15832617 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Escherichia coli O157:H7 # 1 688 1 688 688 1347 100.0 0 MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFAELKRR IIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEMARNQIFLINERQLSVNQQ NWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVEIIRGDTIRYALLEIPSDKVP RFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVHEME ASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVLREKLTISRYDSIVPGGRYHNFKDF INFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFDAIRERDVLLYYPYHTFEHVLELLRQA SFDPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTE AGVHVIFSAPGLKIHAKLFLISRKENGEVVRYAHIGTGNFNEKTARLYTDYSLLTADARI TNEVRRVFNFIENPYRPVTFDYLMVSPQNSRRLLYEMVDREIANAQQGLPSGITLKLNNL VDKGLVDRLYAASSSGVPVNLLVRGMCSLIPNLEGISDNIRAISIVDRYLEHDRVYIFEN GGDKKVYLSSADWMTRNIDYRIEVATPLLDPRLKQRVLDIIDILFSDTVKARYIDKELSN RYVPRGNRRKVRAQLAIYDYIKSLEQPE >gi|299856440|gb|ADWV01000011.1| GENE 89 104214 - 104852 719 212 aa, chain - ## HITS:1 COG:purN KEGG:ns NR:ns ## COG: purN COG0299 # Protein_GI_number: 16130425 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Escherichia coli K12 # 1 212 1 212 212 430 99.0 1e-121 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASA FDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHT HRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDTEDDITARVQTQEHAIYPLV ISWFADGRLKMHENAAWLDGQRLPPQGYAADE >gi|299856440|gb|ADWV01000011.1| GENE 90 104852 - 105889 1243 345 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 2 345 7 356 356 483 68 1e-135 MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGGFGALCALPQKYREPVL VSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEPLFFLDYYATGKLDVDTAS AVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFCVGVVEKSEIIDGSKVSDGDV LIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPLADHLLAPTRIYVKSVLELIEKV DVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQWPEVFNWLQTAGNVERHEMYRTFNC GVGMIIALPAPEVDKALALLNANGENAWKIGIIKASDSEQRVVIE >gi|299856440|gb|ADWV01000011.1| GENE 91 106214 - 106840 842 208 aa, chain + ## HITS:1 COG:ECs3360 KEGG:ns NR:ns ## COG: ECs3360 COG0035 # Protein_GI_number: 15832614 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Escherichia coli O157:H7 # 1 208 10 217 217 394 100.0 1e-110 MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNGP VEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSN IDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAPEGIAALEKAHPDVELYT ASIDQGLNEHGYIIPGLGDAGDKIFGTK >gi|299856440|gb|ADWV01000011.1| GENE 92 106926 - 108215 1017 429 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 3 423 2 428 447 396 47 1e-109 MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFI CKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLF PPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFL AIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPRFEWFAILTILPAALVVIA EHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRV YSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDY NKAQNLILTSVILIIGVSGAKVNIGAAELKGMALATIVGIGLSLIFKLISVLRPEEVVLD AEDADITDK >gi|299856440|gb|ADWV01000011.1| GENE 93 108334 - 109011 640 225 aa, chain + ## HITS:1 COG:ECs3358 KEGG:ns NR:ns ## COG: ECs3358 COG0593 # Protein_GI_number: 15832612 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Escherichia coli O157:H7 # 1 225 24 248 248 447 99.0 1e-126 MPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELS QRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESG KTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPED VGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL >gi|299856440|gb|ADWV01000011.1| GENE 94 109149 - 109508 533 119 aa, chain - ## HITS:1 COG:ECs3357 KEGG:ns NR:ns ## COG: ECs3357 COG1393 # Protein_GI_number: 15832611 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 206 100.0 1e-53 MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKMLGMNSAREL MRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVANGKARIGRPPEQVLEIVG >gi|299856440|gb|ADWV01000011.1| GENE 95 109529 - 110992 1723 487 aa, chain - ## HITS:1 COG:yfgC KEGG:ns NR:ns ## COG: yfgC COG4783 # Protein_GI_number: 16130419 # Func_class: R General function prediction only # Function: Putative Zn-dependent protease, contains TPR repeats # Organism: Escherichia coli K12 # 1 487 1 487 487 872 100.0 0 MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQL RGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSAL FRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLTWVGALGSILLAMASPQAGMA ALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPP EILLTHPLPESRLADARNRANQMRPMVVQSSEDFYLAKARTLGMYNSGRNQLTSDLLDEW AKGNVRQQRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKAN EAINRLKNARDLRTNPVLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAE AALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQER FKPYTKM >gi|299856440|gb|ADWV01000011.1| GENE 96 111205 - 112266 1388 353 aa, chain + ## HITS:1 COG:ECs3355 KEGG:ns NR:ns ## COG: ECs3355 COG0628 # Protein_GI_number: 15832609 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 353 1 353 353 588 99.0 1e-168 MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQ SIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRR YPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLLTIAVYLVLVPLMVFFLLKDK EQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYSL LLAVLVGFSVLIPYIGAFVVTIPVGGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPVL FSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQE >gi|299856440|gb|ADWV01000011.1| GENE 97 112420 - 113151 338 243 aa, chain - ## HITS:1 COG:focB KEGG:ns NR:ns ## COG: focB COG2116 # Protein_GI_number: 16130417 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Escherichia coli K12 # 1 230 1 230 282 409 99.0 1e-114 MRNKLSFDLQLSARKAAIAERIASHKIARSKVSVFLMAMSAGVFMAIGFTFYLSVIADAP SSQALTHLVGGLCFTLGFILLAVCGTSLFTSSVMTVMAKSRGVISWRTWLINALLVACGN LAGIACFSLLIWFSGLVMSENAMWGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWM SYCGRSLCDKIVAMILPITLFVASGFEHCIANLFVIPFAIAIRHFAPRPFGNWRTVAQTI FRH >gi|299856440|gb|ADWV01000011.1| GENE 98 113173 - 115185 1563 670 aa, chain - ## HITS:1 COG:ECs3353 KEGG:ns NR:ns ## COG: ECs3353 COG3604 # Protein_GI_number: 15832607 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains # Organism: Escherichia coli O157:H7 # 8 670 1 663 663 1303 99.0 0 MAMSDEAMFAPPQGITIEAVNGMLAERLAQKHGKASLLRAFIPLPPPFSLVQLIELHVLK SNFYYRYHDDGSDVTATVEYQGEMVDYSRHAVLLGSSGMAELRFIRTHGSRFTPQDCTLF NWLARIITPVLQSWLNDEEQQVALRLLEKDRDHHRVLVDITNAVLSHLDLDDLIADVARE IHHFFGLASVSMVLGDHRKNEKFSLWCSDLSASHCACLPRNMPGDSVLLTQTLQTRQPTL THRADDLFLWQRDPLLLLLASNGCESALLIPLTFGNHTPGALLLAHTSSTLFSEENCQLL QHIADRIAIAVGNADAWRSMTDLQESLQQENHQLSEQLLSNLGVGDIIYQSQAMEDLLQQ VDIVAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAIPASLLESELFGHD KGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVN VRVIAATNRDLWQMVEDRQFRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHM NRAIDAIPTEALRQLMSWDWPGNVRELENVIERAVLLTRGNNLNLHLNVRQSRLLPTLNE DSALRSSMAQLLHPTTPENDEEERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQ RLGISVREVL >gi|299856440|gb|ADWV01000011.1| GENE 99 115215 - 115628 332 137 aa, chain - ## HITS:1 COG:no KEGG:EC55989_2775 NR:ns ## KEGG: EC55989_2775 # Name: hyfJ # Def: putative processing element hydrogenase 4 # Organism: E.coli_55989 # Pathway: not_defined # 1 137 1 137 137 266 100.0 1e-70 MAEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIGHHVGVIDCLNVAFRCPLTEYE DWLAQVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFALLADDATSVWQARSIQFIHLL DEIVQEPAIYLMARKIA >gi|299856440|gb|ADWV01000011.1| GENE 100 115621 - 116379 494 252 aa, chain - ## HITS:1 COG:hyfI KEGG:ns NR:ns ## COG: hyfI COG3260 # Protein_GI_number: 16130414 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III small subunit # Organism: Escherichia coli K12 # 1 251 1 251 252 517 98.0 1e-146 MSPVLTQHVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFD AERFGIKVISSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHD LYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLW PQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLREADDPRLNSIV QQLFRVLRGLHG >gi|299856440|gb|ADWV01000011.1| GENE 101 116376 - 116921 357 181 aa, chain - ## HITS:1 COG:ECs3350 KEGG:ns NR:ns ## COG: ECs3350 COG1143 # Protein_GI_number: 15832604 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Escherichia coli O157:H7 # 1 181 1 181 181 300 97.0 1e-81 MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTD DQQNSHTWQLYLRRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRC ERPFAPQKTVALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLLNDDTDVPLVAKEQ L >gi|299856440|gb|ADWV01000011.1| GENE 102 116931 - 118646 1908 571 aa, chain - ## HITS:1 COG:ECs3349_2 KEGG:ns NR:ns ## COG: ECs3349_2 COG3261 # Protein_GI_number: 15832603 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase III large subunit # Organism: Escherichia coli O157:H7 # 156 571 1 416 416 867 99.0 0 MNVNSSSNRGEAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVHYLYYQHDGWL PVLFGNDERTLNGHYAVYYALSMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGERE IRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLRKDAMDYRLRPEPTTDSETYAFINEGNSG ARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYVHRGMEKLAETRMGYNEVTFLSD RVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFD TGFMQFFRVREKSMTMAELLTGSRKTYGLNLIGGVRRDILKEQRLQTLKLVREMRADVSE LVEMLLAMPNMEQRTQGIGILDRQIARDYSPVGPLIRGSGFARDLRFDHPYADYGNIPKT LFTFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDTPLLTEGFSYKPHAFALGFVEAPR GEDVHWSMLGDNQKLFRWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRV TLVDVRKRQSKTVPYKEIERYGIDRNRSPLK >gi|299856440|gb|ADWV01000011.1| GENE 103 118636 - 119841 1014 401 aa, chain - ## HITS:1 COG:ECs3348 KEGG:ns NR:ns ## COG: ECs3348 COG0651 # Protein_GI_number: 15832602 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 # 1 401 126 526 526 679 99.0 0 MLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVL VYANVASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFVLIGFGTKTGLFPMHAWLPDA HSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFIL VQRDIKRLLAYSSVENMGLVAVALGIGGPLGIFAALLHTLNHSLAKTLLFCGSGNVLLKY GTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLL LLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIR ILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER >gi|299856440|gb|ADWV01000011.1| GENE 104 119848 - 119985 123 45 aa, chain - ## HITS:1 COG:hyfF KEGG:ns NR:ns ## COG: hyfF COG0651 # Protein_GI_number: 16130411 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli K12 # 1 45 78 122 526 89 95.0 2e-18 MFLAILGVIGFLTGVYSIGYMRHEVAHGELSPVTLCDYYGFFHLF >gi|299856440|gb|ADWV01000011.1| GENE 105 119961 - 120215 95 84 aa, chain - ## HITS:1 COG:ECs3348 KEGG:ns NR:ns ## COG: ECs3348 COG0651 # Protein_GI_number: 15832602 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 # 1 76 1 76 526 102 96.0 2e-22 MSYSVMFALLLLTPLLFSLLCFACRKRGLSATCTVTVLHSLGITLLLILALWVVQTAADA GEIFAAGLWLHIDGLAVCSSPFLV >gi|299856440|gb|ADWV01000011.1| GENE 106 120220 - 120870 658 216 aa, chain - ## HITS:1 COG:ECs3347 KEGG:ns NR:ns ## COG: ECs3347 COG4237 # Protein_GI_number: 15832601 # Func_class: C Energy production and conversion # Function: Hydrogenase 4 membrane component (E) # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 339 100.0 2e-93 MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIW SASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPM ATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIG IATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG >gi|299856440|gb|ADWV01000011.1| GENE 107 120882 - 121247 285 121 aa, chain - ## HITS:1 COG:ECs3346 KEGG:ns NR:ns ## COG: ECs3346 COG1009 # Protein_GI_number: 15832600 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Escherichia coli O157:H7 # 1 121 359 479 479 212 99.0 1e-55 MPRLRGVLHTLPLPGVGFCVAALAITGVPPFNGFFSKFPLFAAGFALSVEYWILLPAMIL LMIESVASFAWFIRWFGRVVPGKPSEAVADAAPLPGSMRLVLIVLIVMSLISSVIAATWL Q >gi|299856440|gb|ADWV01000011.1| GENE 108 121283 - 121738 266 151 aa, chain - ## HITS:1 COG:hyfD KEGG:ns NR:ns ## COG: hyfD COG1009 # Protein_GI_number: 16130409 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Escherichia coli K12 # 1 128 126 253 479 228 99.0 4e-60 MAGLVLSSTLLGQLLFFEITGGCSWALISYYQSDKAQRSALKALLITHIGSLGLYLAAAT LFLQTGTFVLSAMSELHGDARYLVYGGILFAAWGKSAQLPMQAWLPDAMEAPTPISAYLH AASMVKVGGWHWRAASPTSSTTRSLKACFSL >gi|299856440|gb|ADWV01000011.1| GENE 109 121657 - 122025 78 122 aa, chain - ## HITS:1 COG:hyfD KEGG:ns NR:ns ## COG: hyfD COG1009 # Protein_GI_number: 16130409 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Escherichia coli K12 # 2 89 31 118 479 168 100.0 3e-42 MGVLFAALTTLCMLSLISAFYQADKVAVTLTLVNVGDVALFGLVIDRVSTLILFVVVFLG LLVTIYSTGYLTDKNREHPHNGTNRYYAFCCCLSARWRDWYSPRRCSVSCCFLKLRAAAP GR >gi|299856440|gb|ADWV01000011.1| GENE 110 122128 - 123075 907 315 aa, chain - ## HITS:1 COG:ECs3345 KEGG:ns NR:ns ## COG: ECs3345 COG0650 # Protein_GI_number: 15832599 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 4 # Organism: Escherichia coli O157:H7 # 1 315 8 322 322 501 99.0 1e-142 MRQTLYDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKR QEVAPISSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFA LSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTLATGWNSPL TTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMAA LFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLG FSLAALAWVFWLTGL >gi|299856440|gb|ADWV01000011.1| GENE 111 123086 - 124318 974 410 aa, chain - ## HITS:1 COG:ECs3344 KEGG:ns NR:ns ## COG: ECs3344 COG0651 # Protein_GI_number: 15832598 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 # 1 410 263 672 672 706 99.0 0 MDLLAQTGLPLWWGTLVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVA MVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMP WTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGL AVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHI AHAFTNTPPVTVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRT GDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGFAHVTARAQSTE PFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV >gi|299856440|gb|ADWV01000011.1| GENE 112 124432 - 125103 489 223 aa, chain - ## HITS:1 COG:ECs3344 KEGG:ns NR:ns ## COG: ECs3344 COG0651 # Protein_GI_number: 15832598 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Escherichia coli O157:H7 # 1 223 1 223 672 295 89.0 5e-80 MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTL VAHFATPFDFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNL FIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMI AFLLMGRESGSLDFASFARFHFLRGWRRRCFCWPFSVLARKPG >gi|299856440|gb|ADWV01000011.1| GENE 113 125103 - 125720 322 205 aa, chain - ## HITS:1 COG:hyfA KEGG:ns NR:ns ## COG: hyfA COG1142 # Protein_GI_number: 16130406 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 2 # Organism: Escherichia coli K12 # 1 204 14 217 218 376 98.0 1e-104 MNRFVVAEPLWCTGCNTCLAACSDVHKTQGLQQHPRLALAKTSTITAPVVCHHCEEAPCL QVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAISASGSRPVNAHAQYVFQAEGSLK DGEENVLPQHALLRWEPGVQTVAVKCDLCDFLPEGPACVRACPNQALRLITDDSLQRQMK EKQRLAASWFANGGEDPLSLTQEQH >gi|299856440|gb|ADWV01000011.1| GENE 114 125973 - 126443 543 156 aa, chain - ## HITS:1 COG:ECs3342 KEGG:ns NR:ns ## COG: ECs3342 COG1225 # Protein_GI_number: 15832596 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 322 100.0 1e-88 MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDEL KKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIH RISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA >gi|299856440|gb|ADWV01000011.1| GENE 115 126443 - 127015 380 190 aa, chain - ## HITS:1 COG:ECs3341 KEGG:ns NR:ns ## COG: ECs3341 COG2716 # Protein_GI_number: 15832595 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system regulatory protein # Organism: Escherichia coli O157:H7 # 1 190 23 212 212 374 99.0 1e-104 MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAMLGEEFTFIMLLSGSWNA ITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDVADSPHLIERFTALFDAHH MNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQAFKALCTELNAQGSINVVNY SQHDEQDGVK >gi|299856440|gb|ADWV01000011.1| GENE 116 127161 - 128039 822 292 aa, chain + ## HITS:1 COG:ECs3340 KEGG:ns NR:ns ## COG: ECs3340 COG0329 # Protein_GI_number: 15832594 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Escherichia coli O157:H7 # 1 292 1 292 292 580 100.0 1e-165 MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVV MMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFK AIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGIKEATGNLTRVNQIKELVSDD FVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLH NKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITDSGRETVRAALKHAGLL >gi|299856440|gb|ADWV01000011.1| GENE 117 128056 - 129090 874 344 aa, chain + ## HITS:1 COG:nlpB KEGG:ns NR:ns ## COG: nlpB COG3317 # Protein_GI_number: 16130402 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Escherichia coli K12 # 1 344 2 345 345 624 99.0 1e-178 MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPV TSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQV VSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLLN LEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSAADDTGLP MLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLAS GDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVSVFQAAFSK >gi|299856440|gb|ADWV01000011.1| GENE 118 129303 - 130016 1154 237 aa, chain + ## HITS:1 COG:ECs3338 KEGG:ns NR:ns ## COG: ECs3338 COG0152 # Protein_GI_number: 15832592 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Escherichia coli O157:H7 # 1 237 1 237 237 463 99.0 1e-130 MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNYFIMSK LAEAGIPTQMERMLSDTECLVKKLDMVPVECVVRNRAAGSLVKRLGIEEGIELNPPLFDL FLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKANDVLKKLFDDAGLILVDFKLEF GLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSLGGLIEAYEAVARRLGVQLD >gi|299856440|gb|ADWV01000011.1| GENE 119 130170 - 130397 272 75 aa, chain + ## HITS:1 COG:PSLT107 KEGG:ns NR:ns ## COG: PSLT107 COG4456 # Protein_GI_number: 17233505 # Func_class: S Function unknown # Function: Virulence-associated protein and related proteins # Organism: Salmonella typhimurium LT2 # 1 75 2 76 76 124 85.0 4e-29 METTVFLSNRSQAVRLPKAVALPEDVKKVEIIAIGRTRIITPAGESWDSWFDGENVSADF MDIRDQPAMQERESF >gi|299856440|gb|ADWV01000011.1| GENE 120 130397 - 130795 182 132 aa, chain + ## HITS:1 COG:PSLT106 KEGG:ns NR:ns ## COG: PSLT106 COG1487 # Protein_GI_number: 17233504 # Func_class: R General function prediction only # Function: Predicted nucleic acid-binding protein, contains PIN domain # Organism: Salmonella typhimurium LT2 # 1 132 1 132 132 251 93.0 3e-67 MLKFMLDTNICIFTIKNKPVHVRERFNLNSGRMCISSVTLMELIYGAEKSQMPERNLAVI EGFVSRLVVLDYDSAAATHTGQIRAELARQGRPVGPFDQMIAGHARSRGLIVVTNNTREF ERVAGIRLEDWS >gi|299856440|gb|ADWV01000011.1| GENE 121 130942 - 131805 857 287 aa, chain + ## HITS:1 COG:ECs3337 KEGG:ns NR:ns ## COG: ECs3337 COG2321 # Protein_GI_number: 15832591 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Escherichia coli O157:H7 # 1 287 1 287 287 537 100.0 1e-152 MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAGYYGVDLTGLMTG QPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMGKTYQQPKLVMYRGMTRTG CGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFAQGYVIAHEVGHHVQKLLGIE PKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHSMQQQGVLETGDLEEALNAAQAIGD DRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPAQCNTFGKSI >gi|299856440|gb|ADWV01000011.1| GENE 122 131859 - 133835 1435 658 aa, chain + ## HITS:1 COG:ypfI KEGG:ns NR:ns ## COG: ypfI COG1444 # Protein_GI_number: 16130399 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase fused to an acetyltransferase # Organism: Escherichia coli K12 # 1 658 14 671 671 1252 96.0 0 MKREGIRRLLVLSGEEGWCFDHALKLRDALPGDWLWISPQPDAENHCSPSALQTLLGREF RHAVFDARHGFDAAAFAALSGTLKAGSWLVLLLPVWEEWENQPDTDSLRWSDCPDPIAAP HFVQHFKRVLTADNDAILWRQNQPFSLAHFTPRTDWHTATGAPQPEQQQLLQQLLTMPSG VAAVTAARGRGKSALAGQLISRIAGSAIVTAPAKAATDVLAQFAGEKFRFIAPDALLASD EQADWLVVDEAAAIPAPLLHQLVSRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFE LQQPIRWAQGCPLEKMVSEALVFDDENFTHTPQGNIVISAFEQTLWRSEPETPLKVYQLL SGAHYRTSPLDLRRMMDAPGQYFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPR GNLVAQSLAAHGSNPLAATLRGRRVSRIAVHPARQREGTGQQLIAGALQYTRDLDYLSVS FGYTGELWRFWHRCGFVLVRMGNHREASSGCYTAMALLPMSNAGKQLAEREHYRLRRDAQ ALAKWNGETLPVDPLNDAVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALR GRLQKNVSDAQLCTTLKLSGRKMLLVRQREEAAQALFALNDVRTERLRDRITQWQFFH >gi|299856440|gb|ADWV01000011.1| GENE 123 133909 - 134607 836 232 aa, chain + ## HITS:1 COG:ECs3335 KEGG:ns NR:ns ## COG: ECs3335 COG0400 # Protein_GI_number: 15832589 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 232 9 240 240 456 100.0 1e-128 MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPLFPDALVVSVGGAEPSGNP AGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMALES IKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGD VTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEALSGGKPGDDDVIEMM >gi|299856440|gb|ADWV01000011.1| GENE 124 134688 - 134888 331 66 aa, chain - ## HITS:1 COG:no KEGG:G2583_2995 NR:ns ## KEGG: G2583_2995 # Name: ypfN # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 66 1 66 66 85 100.0 7e-16 MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPPHRDFNDKWDDDDDWPK KDQPKK >gi|299856440|gb|ADWV01000011.1| GENE 125 134916 - 136043 1174 375 aa, chain - ## HITS:1 COG:dapE KEGG:ns NR:ns ## COG: dapE COG0624 # Protein_GI_number: 16130397 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli K12 # 1 375 1 375 375 777 99.0 0 MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGET LAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPN HTGRLAFLITSDEEASAHNGTVKVVEALMSRNERLDYCLVGEPSSIEVVGDVVKNGRRGS LTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGT GSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKL VDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQ LLARMYQRIMEQLVA >gi|299856440|gb|ADWV01000011.1| GENE 126 136047 - 136403 365 118 aa, chain - ## HITS:1 COG:ECs3333 KEGG:ns NR:ns ## COG: ECs3333 COG1393 # Protein_GI_number: 15832587 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli O157:H7 # 1 118 1 118 118 243 98.0 5e-65 MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNGFINELGWEALLNTRGT TWRKLDETTRNKITDAASAAALMTEMPAIIKRPLLCAPGKPMLLGFSDSSYQQFFHEV >gi|299856440|gb|ADWV01000011.1| GENE 127 136942 - 140055 3276 1037 aa, chain - ## HITS:1 COG:acrD KEGG:ns NR:ns ## COG: acrD COG0841 # Protein_GI_number: 16130395 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1037 1 1037 1037 2041 99.0 0 MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENT VTQVIEQNMTGLDNLMYMSSQSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQ AVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASNIQDPLSRVNGVGDIDAYGS QYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLL QTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEM ATAELVLNRLDELAQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQ NFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLAIGLLVDDAIVVVENVERIM SEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVL SVLVAMILTPALCATLLKPLKKGEHHGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLRW IVIYVLLLGGMVFLFLRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTH EKDNIMSVFATIGSGPGGNGQNVARMFIRLKDWSERDSKTGTSFAIIERATKAFNKIKEA RVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAENPELTRVRHNGLD DSPQLQIDIDQRKAQALGVDIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRML PDDINLWYVRNKDGGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMD IMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVM LVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEA TLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVP LFFVLVRRRFPLKPRPE >gi|299856440|gb|ADWV01000011.1| GENE 128 140219 - 141919 1235 566 aa, chain - ## HITS:1 COG:narQ KEGG:ns NR:ns ## COG: narQ COG3850 # Protein_GI_number: 16130394 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Escherichia coli K12 # 1 566 1 566 566 1075 99.0 0 MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLRMQSYRLGYDL QSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLEMNNRLSKGDLPW YQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAPL NQLVTASQRIEHGQFDSPPLDTSLPNELGLLAKTFNQMSSELHKLYLSLEASVEEKTRDL HEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLELNVGENWRISEGQPNP ELPMQILPVTMQETVYGELHWQNSHVSSSEPLLNSVSSMLGRGLYFNQAQKHFQQLLLME ERATIARELHDSLAQVLSYLRIQLTLLKRSIPEDNATAQSIMADFSQALNDAYRQLRELL TTFRLTLQQADLPSALREMLDTLQNQTSAKLTLDCRLPTLALDAQMQVHLLQIIREAVLN AMKHANASEIAVSCVTAPDGNHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAERLGGTLT FSQPSGGGTLVSISFRSAEGEESQLM >gi|299856440|gb|ADWV01000011.1| GENE 129 142125 - 144104 1504 659 aa, chain + ## HITS:1 COG:aegA_2 KEGG:ns NR:ns ## COG: aegA_2 COG0493 # Protein_GI_number: 16130393 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 181 659 1 479 479 999 99.0 0 MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITVIKHQQQRSAVTCHHCE DAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTMQIVLTPVAAGKVKATAHK CDLCAGRENGPACVENCPADALQLVTDVALSGMAKSRRLRTARQEHQPWHASTAAQEMPV MSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCGEHSVCEWTC PLHNHIPQWIELVKAGNIDAAVELSHQTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTI GNIERYISDQALAKGWRPDLSHVTKVDKRVAIIGAGPAGLACADVLTRNGVGVTVYDRHP EIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDVSLDSLLEQYDAVFVGV GTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTA MDCVRTALRHGASNVTCAYRRDEANMPGSKKEVRNAREEGANFEFNVQPVALELNEQGHV CGIRFLRTRLGEPDAQGRRRPVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKW GRIIADVESQYRYQTTNPKIFAGGDAVRGADLVVTAMAEGRHAAQGIIDWLGVKSVKSH >gi|299856440|gb|ADWV01000011.1| GENE 130 144172 - 144747 703 191 aa, chain + ## HITS:1 COG:yffH KEGG:ns NR:ns ## COG: yffH COG0494 # Protein_GI_number: 16130392 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli K12 # 1 191 1 191 191 369 98.0 1e-102 MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNAKKKSV VLIRQFRVATWVNGNESGQLIETCAGLLDNDEPEVCIRKEAIEETGYEVGEVRKLFELYM SPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPFSQALEMIKTGEIRDGKTVLL LNYLQTSHLMD >gi|299856440|gb|ADWV01000011.1| GENE 131 144873 - 145916 695 347 aa, chain + ## HITS:1 COG:no KEGG:ECO103_2975 NR:ns ## KEGG: ECO103_2975 # Name: ypfG # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 347 1 347 347 672 100.0 0 MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSA GAHTDAVLRIERGGLKSPDASEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITA FLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVGSETAWIKKGDEPPLSVPPAP ALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMIS CEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAK GRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR >gi|299856440|gb|ADWV01000011.1| GENE 132 146012 - 147142 1203 376 aa, chain - ## HITS:1 COG:ZtktB KEGG:ns NR:ns ## COG: ZtktB COG0021 # Protein_GI_number: 15802987 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Escherichia coli O157:H7 EDL933 # 1 376 292 667 667 756 100.0 0 AWDAREKGEKAQQSWNEKFAAYKKAHPQLAEEFTRRMSGGLPKDWEKTTQKYINELQANP AKIATRKASQNTLNAYGPMLPELLGGSADLAPSNLTIWKGSVSLKEDPAGNYIHYGVREF GMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPT HQAVEQLASLRLTPNFSTWRPCDQVEAAVGWKLAVERHNGPTALILSRQNLAQVERTPDQ VKEIARGGYVLKDSGGKPDIILIATGSEMEITLQAAEKLAGEGRNVRVVSLPSTDIFDAQ DEEYRESVLPSNVAARVAVEAGIADYWYKYVGLKGAIVGMTGYGESAPADKLFPFFGFTA ENIVAKAHKVLGVKGA Prediction of potential genes in microbial genomes Time: Sun May 15 15:29:44 2011 Seq name: gi|299856439|gb|ADWV01000012.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont11.1, whole genome shotgun sequence Length of sequence - 137152 bp Number of predicted genes - 121, with homology - 121 Number of transcription units - 62, operones - 26 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 2901 1974 ## COG3209 Rhs family protein - Prom 3023 - 3082 9.0 - Term 3080 - 3122 8.3 2 2 Tu 1 . - CDS 3144 - 3350 256 ## ECO103_0695 hypothetical protein - Prom 3521 - 3580 9.8 + Prom 3389 - 3448 5.2 3 3 Op 1 . + CDS 3549 - 3752 102 ## EcE24377A_0725 K+-transporting ATPase, F subunit (EC:3.6.3.12) 4 3 Op 2 20/0.000 + CDS 3752 - 5425 1874 ## COG2060 K+-transporting ATPase, A chain 5 3 Op 3 18/0.000 + CDS 5448 - 7496 2561 ## COG2216 High-affinity K+ transport system, ATPase chain B 6 3 Op 4 15/0.000 + CDS 7505 - 8077 452 ## COG2156 K+-transporting ATPase, c chain 7 3 Op 5 16/0.000 + CDS 8070 - 10754 2337 ## COG2205 Osmosensitive K+ channel histidine kinase 8 3 Op 6 2/0.833 + CDS 10826 - 11428 693 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 11472 - 11522 14.0 + Prom 11861 - 11920 5.8 9 4 Op 1 10/0.000 + CDS 12118 - 14316 2170 ## COG1982 Arginine/lysine/ornithine decarboxylases 10 4 Op 2 . + CDS 14313 - 15632 1409 ## COG0531 Amino acid transporters + Term 15642 - 15687 -0.4 - Term 15631 - 15677 9.5 11 5 Op 1 6/0.125 - CDS 15688 - 17328 2036 ## COG0033 Phosphoglucomutase 12 5 Op 2 . - CDS 17354 - 17899 413 ## COG3057 Negative regulator of replication initiationR - Prom 18036 - 18095 4.4 + Prom 17992 - 18051 2.4 13 6 Op 1 . + CDS 18084 - 18848 643 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 14 6 Op 2 . + CDS 18919 - 19281 397 ## LF82_2603 uncharacterized protein YbfE + Prom 19305 - 19364 2.9 15 7 Tu 1 . + CDS 19421 - 19951 750 ## COG0716 Flavodoxins + Term 19957 - 19996 9.1 + Prom 20110 - 20169 7.0 16 8 Tu 1 . + CDS 20240 - 20686 491 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 20707 - 20736 2.1 - Term 20739 - 20770 0.1 17 9 Op 1 . - CDS 20771 - 21097 426 ## B21_00630 hypothetical protein 18 9 Op 2 . - CDS 21147 - 22553 1583 ## B21_00629 hypothetical protein - Term 22901 - 22929 3.0 19 10 Tu 1 . - CDS 22999 - 24663 2156 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 24746 - 24805 7.7 - Term 24777 - 24820 6.6 20 11 Tu 1 . - CDS 24866 - 26812 2158 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Prom 26846 - 26905 5.4 21 12 Op 1 12/0.000 + CDS 27145 - 27945 918 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 27956 - 27993 2.1 22 12 Op 2 7/0.042 + CDS 28005 - 29153 1348 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase 23 12 Op 3 5/0.292 + CDS 29162 - 30382 261 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 24 12 Op 4 5/0.292 + CDS 30430 - 31182 876 ## COG0647 Predicted sugar phosphatases of the HAD superfamily + Term 31186 - 31222 4.9 + Prom 31317 - 31376 7.8 25 13 Tu 1 . + CDS 31439 - 33103 1962 ## COG0367 Asparagine synthase (glutamine-hydrolyzing) + Term 33111 - 33155 12.5 + TRNA 33484 - 33560 96.2 # Met CAT 0 0 + TRNA 33569 - 33653 78.3 # Leu TAG 0 0 + TRNA 33677 - 33751 74.3 # Gln TTG 0 0 + TRNA 33786 - 33860 74.3 # Gln TTG 0 0 + TRNA 33876 - 33952 96.2 # Met CAT 0 0 + TRNA 34001 - 34075 75.8 # Gln CTG 0 0 + TRNA 34113 - 34187 75.8 # Gln CTG 0 0 - Term 34185 - 34213 1.0 26 14 Tu 1 . - CDS 34341 - 35516 1219 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - Prom 35567 - 35626 3.1 + Prom 35491 - 35550 2.1 27 15 Op 1 10/0.000 + CDS 35662 - 37086 438 ## PROTEIN SUPPORTED gi|227372256|ref|ZP_03855738.1| SSU ribosomal protein S12P methylthiotransferase + Term 37093 - 37125 6.1 + Prom 37129 - 37188 2.2 28 15 Op 2 17/0.000 + CDS 37239 - 38279 1309 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 29 15 Op 3 11/0.000 + CDS 38276 - 38743 712 ## COG0319 Predicted metal-dependent hydrolase + Term 38774 - 38809 2.4 30 15 Op 4 9/0.000 + CDS 38833 - 39711 924 ## COG4535 Putative Mg2+ and Co2+ transporter CorC 31 15 Op 5 . + CDS 39736 - 41274 1936 ## COG0815 Apolipoprotein N-acyltransferase + Term 41325 - 41359 5.1 32 16 Tu 1 . - CDS 41352 - 43229 638 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) - Prom 43258 - 43317 3.0 + Prom 43552 - 43611 4.0 33 17 Op 1 31/0.000 + CDS 43684 - 44592 1219 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 44715 - 44754 9.1 + Prom 44658 - 44717 2.0 34 17 Op 2 17/0.000 + CDS 44762 - 45502 791 ## COG0765 ABC-type amino acid transport system, permease component 35 17 Op 3 34/0.000 + CDS 45502 - 46176 718 ## COG0765 ABC-type amino acid transport system, permease component 36 17 Op 4 4/0.625 + CDS 46176 - 46901 552 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 37 18 Op 1 3/0.667 + CDS 47019 - 47954 1025 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase + Term 47966 - 48016 8.0 + Prom 47959 - 48018 2.3 38 18 Op 2 . + CDS 48038 - 49708 1354 ## COG0443 Molecular chaperone + Term 49807 - 49862 0.2 - Term 49697 - 49753 7.4 39 19 Op 1 . - CDS 49768 - 51219 890 ## EC55989_0641 Hsc56 co-chaperone of HscC 40 19 Op 2 . - CDS 51216 - 51923 497 ## EC55989_0640 hypothetical protein - Prom 52006 - 52065 10.2 + Prom 51931 - 51990 9.1 41 20 Tu 1 . + CDS 52039 - 52578 301 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Term 52530 - 52572 1.1 42 21 Op 1 . - CDS 52588 - 54015 690 ## EcSMS35_0667 DnaJ domain-containing protein 43 21 Op 2 . - CDS 54012 - 54719 275 ## ECO103_0652 hypothetical protein - Prom 54792 - 54851 7.4 + Prom 54734 - 54793 4.9 44 22 Tu 1 . + CDS 54883 - 55860 804 ## COG0790 FOG: TPR repeat, SEL1 subfamily + Term 55873 - 55908 4.3 - Term 55745 - 55777 3.1 45 23 Tu 1 . - CDS 55930 - 56412 490 ## APECO1_1413 hypothetical protein - Prom 56494 - 56553 3.1 + Prom 56394 - 56453 3.9 46 24 Op 1 9/0.000 + CDS 56506 - 59229 3215 ## COG0495 Leucyl-tRNA synthetase 47 24 Op 2 12/0.000 + CDS 59244 - 59825 539 ## COG2980 Rare lipoprotein B 48 24 Op 3 7/0.042 + CDS 59825 - 60856 901 ## COG1466 DNA polymerase III, delta subunit 49 24 Op 4 3/0.667 + CDS 60858 - 61499 469 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 50 24 Op 5 6/0.125 + CDS 61523 - 62134 437 ## COG0406 Fructose-2,6-bisphosphatase + Prom 62299 - 62358 4.7 51 25 Op 1 14/0.000 + CDS 62394 - 62711 314 ## COG0799 Uncharacterized homolog of plant Iojap protein 52 25 Op 2 9/0.000 + CDS 62715 - 63182 561 ## COG1576 Uncharacterized conserved protein 53 25 Op 3 19/0.000 + CDS 63213 - 65114 1990 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 54 25 Op 4 8/0.000 + CDS 65117 - 66229 1125 ## COG0772 Bacterial cell division membrane protein 55 25 Op 5 12/0.000 + CDS 66240 - 67328 937 ## COG0797 Lipoproteins + Term 67408 - 67442 1.3 + Prom 67371 - 67430 5.0 56 25 Op 6 9/0.000 + CDS 67468 - 68679 1331 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 68738 - 68769 4.8 + Prom 68683 - 68742 2.3 57 25 Op 7 6/0.125 + CDS 68790 - 69053 332 ## COG2921 Uncharacterized conserved protein + Prom 69062 - 69121 3.9 58 26 Tu 1 . + CDS 69154 - 69795 562 ## COG0321 Lipoate-protein ligase B + Term 69809 - 69842 -0.3 + Prom 69828 - 69887 5.7 59 27 Tu 1 . + CDS 70054 - 71007 691 ## COG0583 Transcriptional regulator + Prom 71071 - 71130 4.7 60 28 Tu 1 . + CDS 71216 - 72181 870 ## COG0320 Lipoate synthase + Term 72218 - 72247 2.1 - Term 72206 - 72235 2.1 61 29 Tu 1 . - CDS 72282 - 72491 178 ## PROTEIN SUPPORTED gi|90022866|ref|YP_528693.1| ribosomal protein L25 - Prom 72532 - 72591 3.7 62 30 Tu 1 . - CDS 72614 - 73402 801 ## COG0388 Predicted amidohydrolase - Prom 73480 - 73539 2.7 + Prom 73377 - 73436 5.2 63 31 Tu 1 . + CDS 73495 - 73878 193 ## COG0239 Integral membrane protein possibly involved in chromosome condensation + Term 73892 - 73920 0.6 - Term 73878 - 73908 1.0 64 32 Op 1 . - CDS 73932 - 74141 347 ## COG1278 Cold shock proteins - Prom 74255 - 74314 6.5 - Term 74155 - 74183 -0.0 65 32 Op 2 . - CDS 74316 - 74876 477 ## B21_00581 hypothetical protein - Prom 75109 - 75168 9.8 + Prom 75382 - 75441 6.9 66 33 Tu 1 . + CDS 75465 - 76850 1429 ## COG3069 C4-dicarboxylate transporter + Term 76859 - 76893 5.2 - Term 76841 - 76885 5.1 67 34 Op 1 9/0.000 - CDS 76891 - 77571 263 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 68 34 Op 2 . - CDS 77540 - 79198 1476 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism - Prom 79250 - 79309 5.3 + Prom 79362 - 79421 7.4 69 35 Op 1 5/0.292 + CDS 79578 - 80636 889 ## COG3053 Citrate lyase synthetase 70 35 Op 2 6/0.125 + CDS 80651 - 80947 282 ## COG3052 Citrate lyase, gamma subunit 71 35 Op 3 6/0.125 + CDS 80944 - 81852 1184 ## COG2301 Citrate lyase beta subunit 72 35 Op 4 7/0.042 + CDS 81863 - 83395 1722 ## COG3051 Citrate lyase, alpha subunit 73 35 Op 5 5/0.292 + CDS 83399 - 83950 383 ## COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) 74 35 Op 6 5/0.292 + CDS 83931 - 84803 640 ## COG1767 Triphosphoribosyl-dephospho-CoA synthetase 75 35 Op 7 4/0.625 + CDS 84854 - 86317 1714 ## COG0471 Di- and tricarboxylate transporters + Term 86349 - 86390 10.1 + Prom 86334 - 86393 3.6 76 36 Tu 1 4/0.625 + CDS 86413 - 87237 474 ## COG3719 Ribonuclease I + Term 87387 - 87421 5.0 + Prom 87321 - 87380 3.7 77 37 Op 1 . + CDS 87467 - 87877 386 ## COG0782 Transcription elongation factor 78 37 Op 2 . + CDS 87916 - 88104 68 ## ECH74115_0696 hypothetical protein 79 38 Tu 1 . - CDS 88108 - 89346 883 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 89371 - 89430 2.0 80 39 Tu 1 . - CDS 89465 - 89671 82 ## EcE24377A_0629 hypothetical protein + Prom 89472 - 89531 3.3 81 40 Tu 1 . + CDS 89567 - 89995 506 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 90015 - 90056 7.1 - Term 90050 - 90085 5.5 82 41 Op 1 11/0.000 - CDS 90116 - 91681 411 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 - Term 91757 - 91788 4.1 83 41 Op 2 . - CDS 91852 - 92415 597 ## COG0450 Peroxiredoxin - Prom 92479 - 92538 3.9 84 42 Tu 1 . + CDS 92787 - 93533 690 ## COG1651 Protein-disulfide isomerase + Prom 93615 - 93674 7.6 85 43 Tu 1 . + CDS 93742 - 94644 458 ## COG0583 Transcriptional regulator + Prom 94687 - 94746 6.4 86 44 Op 1 8/0.000 + CDS 94791 - 96011 716 ## COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase 87 44 Op 2 . + CDS 95996 - 96613 573 ## COG1475 Predicted transcriptional regulators + Term 96628 - 96667 0.6 - Term 96539 - 96586 5.0 88 45 Tu 1 . - CDS 96614 - 97774 1006 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 97804 - 97863 5.2 + Prom 97778 - 97837 3.6 89 46 Tu 1 . + CDS 97883 - 98971 1204 ## COG0371 Glycerol dehydrogenase and related enzymes + Term 99056 - 99096 -0.4 90 47 Op 1 9/0.000 - CDS 98981 - 99178 263 ## COG2879 Uncharacterized small protein - Prom 99241 - 99300 3.9 - Term 99199 - 99241 -0.7 91 47 Op 2 4/0.625 - CDS 99360 - 101465 2715 ## COG1966 Carbon starvation protein, predicted membrane protein - Prom 101503 - 101562 3.6 - Term 101544 - 101604 0.3 92 48 Op 1 5/0.292 - CDS 101646 - 102059 401 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 93 48 Op 2 5/0.292 - CDS 102062 - 102808 928 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 94 48 Op 3 5/0.292 - CDS 102808 - 103665 1129 ## COG1535 Isochorismate hydrolase 95 48 Op 4 6/0.125 - CDS 103679 - 105289 1534 ## COG1021 Peptide arylation enzymes 96 48 Op 5 . - CDS 105299 - 106474 1198 ## COG1169 Isochorismate synthase - Prom 106529 - 106588 6.3 + Prom 106466 - 106525 5.1 97 49 Tu 1 . + CDS 106663 - 107619 1027 ## COG4592 ABC-type Fe2+-enterobactin transport system, periplasmic component - Term 107314 - 107378 1.7 98 50 Tu 1 . - CDS 107623 - 108873 1229 ## COG0477 Permeases of the major facilitator superfamily - Prom 108916 - 108975 3.9 + Prom 108860 - 108919 4.5 99 51 Op 1 8/0.000 + CDS 108972 - 109988 1258 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 100 51 Op 2 7/0.042 + CDS 109985 - 110977 980 ## COG4779 ABC-type enterobactin transport system, permease component 101 51 Op 3 . + CDS 110974 - 111789 197 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 102 52 Tu 1 . - CDS 111786 - 112919 967 ## COG3765 Chain length determinant protein - Prom 113074 - 113133 8.5 103 53 Op 1 2/0.833 - CDS 113135 - 117016 3684 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 104 53 Op 2 2/0.833 - CDS 117013 - 117231 272 ## COG3251 Uncharacterized protein conserved in bacteria 105 53 Op 3 . - CDS 117234 - 118436 758 ## COG2382 Enterochelin esterase and related enzymes - Prom 118483 - 118542 4.8 + Prom 118444 - 118503 4.5 106 54 Tu 1 . + CDS 118679 - 120919 2758 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 121032 - 121069 2.2 + Prom 120975 - 121034 9.7 107 55 Tu 1 . + CDS 121085 - 121714 425 ## COG2977 Phosphopantetheinyl transferase component of siderophore synthetase - Term 121791 - 121835 3.2 108 56 Tu 1 . - CDS 121836 - 121988 122 ## EFER_2525 putative small toxic membrane polypeptide, putative HokE-like protein (partial) - Prom 122153 - 122212 4.9 - Term 122294 - 122338 3.2 109 57 Tu 1 . - CDS 122339 - 122491 128 ## EcHS_A0629 Hok/Gef family protein - Prom 122639 - 122698 5.5 + Prom 122788 - 122847 2.4 110 58 Op 1 . + CDS 122933 - 124051 892 ## COG2170 Uncharacterized conserved protein 111 58 Op 2 . + CDS 124117 - 124365 307 ## S0495 hypothetical protein + Term 124374 - 124408 -1.0 112 58 Op 3 4/0.625 + CDS 124430 - 124798 280 ## COG2315 Uncharacterized protein conserved in bacteria + Prom 124804 - 124863 3.5 113 58 Op 4 3/0.667 + CDS 124892 - 125425 523 ## COG0778 Nitroreductase + Term 125554 - 125584 3.7 + Prom 125572 - 125631 4.2 114 59 Tu 1 . + CDS 125652 - 126899 1355 ## COG0668 Small-conductance mechanosensitive channel + Term 126940 - 126995 1.8 - Term 126897 - 126935 8.5 115 60 Tu 1 . - CDS 126967 - 128343 1682 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 128373 - 128432 3.5 116 61 Op 1 11/0.000 - CDS 128445 - 131588 3272 ## COG3696 Putative silver efflux pump 117 61 Op 2 3/0.667 - CDS 131600 - 132823 1257 ## COG0845 Membrane-fusion protein 118 61 Op 3 3/0.667 - CDS 132839 - 133171 507 ## COG5569 Uncharacterized conserved protein 119 61 Op 4 . - CDS 133198 - 134577 478 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 - Prom 134692 - 134751 3.9 + Prom 134536 - 134595 2.7 120 62 Op 1 40/0.000 + CDS 134734 - 135417 782 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 121 62 Op 2 . + CDS 135407 - 136855 1115 ## COG0642 Signal transduction histidine kinase Predicted protein(s) >gi|299856439|gb|ADWV01000012.1| GENE 1 3 - 2901 1974 966 aa, chain - ## HITS:1 COG:rhsB KEGG:ns NR:ns ## COG: rhsB COG3209 # Protein_GI_number: 16131354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 966 1 966 1411 1860 97.0 0 MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSGCPGGVTSGHPVNPLLGAKVLPG ETDIALPAPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRS LYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQ GPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDG AGRHFRLVLTTQAQQAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDP EYPENLPAAPLVRYGWTPRGELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEIRYR YDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREVLHTQGEAGLKRVVKKEHADGSV TQSQFDAVGRLRAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHSQLTSATGP DGLELRREYDESGRLIQETAPDGDITRYRYDNPHSDLPCATDDATGSRKTMTWSRYGQLL SFTDCSGYQTRYDHDRFGQMTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNIAG DLTAVIAPDGSRNGTQYDAWGKAVRTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDV LDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVKGETAERWRY DERGWLTDISHISEGHRVAVHYRYDEKGRLTGERQTVHHPQTEALLWQHETRHAYNAQGL ANRCIPDSLPAVEWLTYGSGWLAGMKLGDTPLVDFTRDRLHRETLRSFGRYELTTAYTPA GQLQRQHLNSLQYDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIP YATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRYGRLTEKTDLIPEGGIRTD DERTHR >gi|299856439|gb|ADWV01000012.1| GENE 2 3144 - 3350 256 68 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0695 NR:ns ## KEGG: ECO103_0695 # Name: ybfA # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 68 1 68 68 117 100.0 1e-25 MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLHRVWSKTSDKPVWMDQA EKATGDFY >gi|299856439|gb|ADWV01000012.1| GENE 3 3549 - 3752 102 67 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_0725 NR:ns ## KEGG: EcE24377A_0725 # Name: kdpF # Def: K+-transporting ATPase, F subunit (EC:3.6.3.12) # Organism: E.coli_E24377A # Pathway: Two-component system [PATH:ecw02020] # 1 67 1 67 67 93 100.0 2e-18 MAFAIFILFLHPARRFLRNLCSQNSTLPVSLLGHWRCTVSAGVITGVLLVFLLLGYLVYA LINAEAF >gi|299856439|gb|ADWV01000012.1| GENE 4 3752 - 5425 1874 557 aa, chain + ## HITS:1 COG:kdpA KEGG:ns NR:ns ## COG: kdpA COG2060 # Protein_GI_number: 16128674 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Escherichia coli K12 # 1 557 1 557 557 979 99.0 0 MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTTGVERVLFRALGVSDREMNWK QYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLALNTAVSFVTNTNWQSYSG ETTLSYFSQMAGLTVQNFLSAASGIAVIFALIRAFTRQSMSTLGNAWVDLLRITLWVLVP VALLIALFFIQQGALQNFQPYQAVNTVEGAQQLLPMGPVASQEAIKMLGTNGGGFFNANS SHPFENPTALTNFVQMLAIFLIPTALCFAFGEVTGDRRQGRMLLWAMSVIFVICVGVVMW AEVQGNPHLLALGADSSINMEGKESRFGVLVSSLFAVVTTAASCGAVIAMHDSFTALGGM VPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVFIAGLMIGRTPEYLGKKIDVREMKLTALA ILVTPTLVLMGAALAMMTDAGRSAMLNPGPHGFSEVLYAVSSAANNNGSAFAGLSANSPF WNCLLAFCMFVGRFGVIIPVMAIAGSLVSKKSQPASSGTLPTHGPLFVGLLIGTVLLVGA LTFIPALALGPVAEYLS >gi|299856439|gb|ADWV01000012.1| GENE 5 5448 - 7496 2561 682 aa, chain + ## HITS:1 COG:ECs0725 KEGG:ns NR:ns ## COG: ECs0725 COG2216 # Protein_GI_number: 15829979 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Escherichia coli O157:H7 # 1 682 1 682 682 1248 99.0 0 MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSLLTTCISIAMASGAMPG NALFSAAISGWLWVTVLFANFAEALAEGRSKAQANSLKGVKKTAFARKLREPKYGAAADK VPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITGESAPVIRESGGDFASVTGGT RILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLIALTIVFLLATATLW PFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGD VDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRF NLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKV DQVARQGATPLVVVEGSRVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAA IAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQ AAKEAGNMVDLDSNPTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYP QLNALNIMRLHSPDSAILSAVIFNALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLG GLLVPFIGIKVIDLLLTVCGLV >gi|299856439|gb|ADWV01000012.1| GENE 6 7505 - 8077 452 190 aa, chain + ## HITS:1 COG:kdpC KEGG:ns NR:ns ## COG: kdpC COG2156 # Protein_GI_number: 16128672 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Escherichia coli K12 # 1 190 1 190 190 327 96.0 1e-89 MRGLRPALSTFIFLLLITGGVYPLLTTVLGQWWFPWQANGSLIREGDTVRGSALIGQNFT GNGYFQGRPSATAEMPYNPQASGGSNLAVSNPELDKQIAARVAALRAANPDASTNVPVEL VTASASGLDNNITPQAAVWQIPRVAKARNLSVEQLTQLIAKYSQQPLVKYIGQPVVNIVE LNLALDKLDE >gi|299856439|gb|ADWV01000012.1| GENE 7 8070 - 10754 2337 894 aa, chain + ## HITS:1 COG:ECs0723 KEGG:ns NR:ns ## COG: ECs0723 COG2205 # Protein_GI_number: 15829977 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Escherichia coli O157:H7 # 1 894 1 894 894 1762 99.0 0 MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAEAQRLRAQGLDIVVGVV ETHGRKDTAAMLEGLAVLPPKRQAYRGRHISEFDLDAALARRPALILMDELAHSNAPGSR HPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGIQVRETVPDPFFDAADDVVLV DLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIALRELALRRTADRVDEQMRAWRGH PGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASRLGSVWHAVYVETPALHRLPEKKRR AILSALRLAQELGAETATLSDPAEEKAVVRYAREHNLGKIILGRPASRRWWRRETFADRL ARIAPDLDQVLVALDEPPARTINNAPDSRSFKDKWRVQIQGCVVAAALCAVITLIAMQWL MAFDAANLVMLYLLGVVVVALFYGRWPSVVATVINVVSFDLFFIAPRGTLAVSDVQYLLT FAVMLTVGLVIGNLTAGVRYQARVARYREQRTRHLYEMSKALAVGRSPQDIAATSEQFIA STFHARSQVLLPDDNGKLQPLTHPQGMTPWDDAIAQWSFDKGLPAGAGTDTLPGVPYQIL PLKSGEKTYGLVVVEPGNLRQLMIPEQQRLLETFTLLVANAFERLTLTASEEQARMASER EQIRNALLAALSHDLRTPLTVLFGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNN LLDMARIQSGGFNLKKEWLTLEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFER VLINLLENAVKYAGAQAEIGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKES AVPGVGLGLAICRAIVDVHGGTITAFNRPEGGACFRVTLPQQTAPELEDFHEDM >gi|299856439|gb|ADWV01000012.1| GENE 8 10826 - 11428 693 200 aa, chain + ## HITS:1 COG:ECs0722 KEGG:ns NR:ns ## COG: ECs0722 COG0745 # Protein_GI_number: 15829976 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 199 26 224 225 385 99.0 1e-107 MRVYEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEES DKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATAAPDPLVKFSDVTVDLAARVIHR GEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQ DPARPRHFITETGIGYRFMP >gi|299856439|gb|ADWV01000012.1| GENE 9 12118 - 14316 2170 732 aa, chain + ## HITS:1 COG:ECs0721 KEGG:ns NR:ns ## COG: ECs0721 COG1982 # Protein_GI_number: 15829975 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 732 1 732 732 1538 99.0 0 MSELKIAVSRSCPDCFSTHRACVNIDESNYIDVAAIILSVSDVERGKLDEIDATGYDIPV FIATENEERVPAEYLPRISGVFEHCESRKEFYGRQLETAASHYETQLRPPFFRALVDYVN QGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEMLFRSDLCNADVAMGDLLIHEGAPCIAQ QHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPV YLETARNPYGFIGGIDAHCFEESYLRELITEVAPQRAKEARPFRLAVIQLGTYDGTIYNA RQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGF SQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSPFYPLFAALDINAKMHEGVSGRNM WMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEHWHS FEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVPEKCDLNSIL FLLTPAEDMAKLQQLVALLVRFEKLLESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMH DLYARHNVKQLQKEMFRKEHFPRVSMNPQEANYAYLRGEVELVRLPDAEGRIAAEGALPY PPGVLCVVPGEIWGGAVLRYFSALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPR DAQSTLLKGEKL >gi|299856439|gb|ADWV01000012.1| GENE 10 14313 - 15632 1409 439 aa, chain + ## HITS:1 COG:potE KEGG:ns NR:ns ## COG: potE COG0531 # Protein_GI_number: 16128668 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 439 1 439 439 770 100.0 0 MSQAKSNKMGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIISWLVTAVGSMALAWAFA KCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELLGASLS PVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIPVVGLCIIGWFWFSPTLYVDS WNPHHAPFFSAVGSSIAMTLWAFLGLESACANTDVVENPERNVPIAVLGGTLGAAVIYIV STNVIAGIVPNMELANSTAPFGLAFAQMFTPEVGKVIMALMVMSCCGSLLGWQFTIAQVF KSSSDEGYFPKIFSRVTKVDAPVQGMLTIVIIQSGLALMTISPSLNSQFNVLVNLAVVTN IIPYILSMAALVIIQKVANVPPSKAKVANFVAFVGAMYSFYALYSSGEEAMLYGSIVTFL GWTLYGLVSPRFELKNKHG >gi|299856439|gb|ADWV01000012.1| GENE 11 15688 - 17328 2036 546 aa, chain - ## HITS:1 COG:pgm KEGG:ns NR:ns ## COG: pgm COG0033 # Protein_GI_number: 16128664 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Escherichia coli K12 # 1 546 1 546 546 1080 99.0 0 MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGTSGHRGSAARHSFNEPH ILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPT PAISNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKVVEDRANAL MADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADIVDMAAIQKAGLTLGVDPLGGSG IEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDLA FANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQHRPQWGKDVAVGKTLVSSAMIDRVVN DLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAE ITAVTGKNPQEHYNELAKRFGAPSYNRLQAAATSAQKAALSKLSPEMVSASTLAGDPITA RLTAAPGNGASIGGLKVMTDNGWFAARPSGTEDAYKIYCESFLGEEHRKQIEKEAVEIVS EVLKNA >gi|299856439|gb|ADWV01000012.1| GENE 12 17354 - 17899 413 181 aa, chain - ## HITS:1 COG:seqA KEGG:ns NR:ns ## COG: seqA COG3057 # Protein_GI_number: 16128663 # Func_class: L Replication, recombination and repair # Function: Negative regulator of replication initiationR # Organism: Escherichia coli K12 # 1 181 1 181 181 344 100.0 5e-95 MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAPVTKEVRVASPAIVEAK PVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLDAQAFAEATESLHGRTRVY FAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMIEHIMQSMQFPAELIEKVCGT I >gi|299856439|gb|ADWV01000012.1| GENE 13 18084 - 18848 643 254 aa, chain + ## HITS:1 COG:ybfF KEGG:ns NR:ns ## COG: ybfF COG0596 # Protein_GI_number: 16128662 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 254 1 254 254 497 99.0 1e-141 MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDMRNHGLSPRDP VMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH VRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWD QYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEK PDAVLRAIRRYLND >gi|299856439|gb|ADWV01000012.1| GENE 14 18919 - 19281 397 120 aa, chain + ## HITS:1 COG:no KEGG:LF82_2603 NR:ns ## KEGG: LF82_2603 # Name: ybfE # Def: uncharacterized protein YbfE # Organism: E.coli_LF82 # Pathway: not_defined # 1 120 1 120 120 190 99.0 1e-47 MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRIN KRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV >gi|299856439|gb|ADWV01000012.1| GENE 15 19421 - 19951 750 176 aa, chain + ## HITS:1 COG:ECs0715 KEGG:ns NR:ns ## COG: ECs0715 COG0716 # Protein_GI_number: 15829969 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 348 100.0 3e-96 MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGIPTWYYG EAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHW PTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQISEELHLDEILNA >gi|299856439|gb|ADWV01000012.1| GENE 16 20240 - 20686 491 148 aa, chain + ## HITS:1 COG:ECs0714 KEGG:ns NR:ns ## COG: ECs0714 COG0735 # Protein_GI_number: 15829968 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Escherichia coli O157:H7 # 1 148 1 148 148 279 100.0 1e-75 MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLN QFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDDSIEARQREIAAKHGI RLTNHSLYLYGHCAEGDCREDEHAHEGK >gi|299856439|gb|ADWV01000012.1| GENE 17 20771 - 21097 426 108 aa, chain - ## HITS:1 COG:no KEGG:B21_00630 NR:ns ## KEGG: B21_00630 # Name: ybfN # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 108 1 108 108 171 100.0 7e-42 MKKLILIAMMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKE KQHQQFADQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQEIRSNNK >gi|299856439|gb|ADWV01000012.1| GENE 18 21147 - 22553 1583 468 aa, chain - ## HITS:1 COG:no KEGG:B21_00629 NR:ns ## KEGG: B21_00629 # Name: ybfM # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 468 1 468 468 880 100.0 0 MRTFSGKRSTLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGGIYYWQRERDRKDVTDG DKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSSHPNEIAFSKSNKAY DEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANF DYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKVDYLHSLGAKYDFKNNFVLEAAF GQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRDKVDDRSVNDLYDGTAWLQALTFGY RAADVVDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFG AMYDLKNWNLPGFAIGASYVYAWDAKPATWQSNPDAYYDKNRTIEESAYSLDAVYTIQDG RAKGTMFKLHFTEYDNHSDIPSWGGGYGNIFQDERDVKFMVIAPFTIF >gi|299856439|gb|ADWV01000012.1| GENE 19 22999 - 24663 2156 554 aa, chain - ## HITS:1 COG:glnS KEGG:ns NR:ns ## COG: glnS COG0008 # Protein_GI_number: 16128656 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 554 1 554 554 1169 100.0 0 MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKG QCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLA YVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMA SPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRL YDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRR GYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGE GEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKA ERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVP NPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFN RTVGLRDTWAKVGE >gi|299856439|gb|ADWV01000012.1| GENE 20 24866 - 26812 2158 648 aa, chain - ## HITS:1 COG:ECs0709_1 KEGG:ns NR:ns ## COG: ECs0709_1 COG1263 # Protein_GI_number: 15829963 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 1 390 1 390 390 690 100.0 0 MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQAGGAIFDNLALIFAIGV ASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGIITGLVGGAAYNRWSDIKL PDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIHAGGEWIVSAGALGSGIFGFI NRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINRFYAGDGTAGMFMSGFFPIMMFG LPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTG ISLFVATLLGIHAGFSFSAGAIDYALMYNLPAASQNVWMLLVMGVVFFAIYFVVFSLVIR MFNLKTPGREDKEDEIVTEEANSNTEEGLNQLATNYIAAVGGTDNLKAIDACITRLRLTV ADSARVNDTMCKRLGASGVVKLNKQTIQVIVGAKAESIGDAMKKVVARGPVAAASAEATP ATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEAFASKAVGDGVAVKPTDKIVVS PAAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILE MDLDYLNANARSMISPVVCSNIDDFSGLIIKAQGHVVAGQTPLYEIKK >gi|299856439|gb|ADWV01000012.1| GENE 21 27145 - 27945 918 266 aa, chain + ## HITS:1 COG:ECs0708 KEGG:ns NR:ns ## COG: ECs0708 COG0363 # Protein_GI_number: 15829962 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 560 100.0 1e-159 MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQ VSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQ YEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQ VPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCD EPSTMELKVKTLRYFNELEAENIKGL >gi|299856439|gb|ADWV01000012.1| GENE 22 28005 - 29153 1348 382 aa, chain + ## HITS:1 COG:ECs0707 KEGG:ns NR:ns ## COG: ECs0707 COG1820 # Protein_GI_number: 15829961 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 769 100.0 0 MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQL NGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAK HPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEV ISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEAD IYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFAGKTIYYRNGLCV DENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANL TAFTPDFKITKTIVNGNEVVTQ >gi|299856439|gb|ADWV01000012.1| GENE 23 29162 - 30382 261 406 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 129 390 47 317 319 105 27 2e-21 MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQLAPASVTKITRQLIERG LIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITLFDLSSKVLAEEHYPLPER TQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVE ALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNG NVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRVPLDDCTIKTI CKAANKGDSLASEVIEYVGRHLGKTIAIAINLFNPQKIVIAGEITEADKVLLPAIESCIN TQALKAFRTNLPVVRSELDHRSAIGAFALVKRAMLNGILLQHLLEN >gi|299856439|gb|ADWV01000012.1| GENE 24 30430 - 31182 876 250 aa, chain + ## HITS:1 COG:ECs0705 KEGG:ns NR:ns ## COG: ECs0705 COG0647 # Protein_GI_number: 15829959 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 517 100.0 1e-147 MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAG VDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETR SYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPW IIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWI YPSVAEIDVI >gi|299856439|gb|ADWV01000012.1| GENE 25 31439 - 33103 1962 554 aa, chain + ## HITS:1 COG:ECs0704 KEGG:ns NR:ns ## COG: ECs0704 COG0367 # Protein_GI_number: 15829958 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthase (glutamine-hydrolyzing) # Organism: Escherichia coli O157:H7 # 1 554 1 554 554 1145 99.0 0 MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGA QPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEVILALYQEKGPEFLDDLQG MFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKSLVPVCRTIKEFPAGSY LWSQDGEIRSYYHRDWFDFDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDS SIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHF TVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFGGYLY FHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQD KMCGNGKMEKHILRECFESYLPASVAWRQKEQFSDGVGYSWIDTLKEVAAQQVSDQQLET ARFRFPYNTPTSKEAYLYREIFEELFPLPSAAECVPGGPSVACSSAKAIEWDEAFKKMDD PSGRAVGVHQSAYK >gi|299856439|gb|ADWV01000012.1| GENE 26 34341 - 35516 1219 391 aa, chain - ## HITS:1 COG:ECs0700 KEGG:ns NR:ns ## COG: ECs0700 COG0654 # Protein_GI_number: 15829954 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 775 98.0 0 MTNQPTEIAIVGGGMVGGALALGLAQHGFSVTVIEHAEPAPFVADSQPDVRISAISAASV SLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVMFDAAELKLPLLGYMVENTVLQQALWQ ALEAHPKVTLRVPGSLIALHRDNDLQELELKGGEVIRAKLVIGADGANSQVRQMAGIGVH AWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPLFDNWASLVWYDSPVRIRQLQNM NMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHALQYVQPGLALVGDAAHTIHPLAGQG VNLGYRDVDALIDVLVNARSYGEAWASYPVLKRYQMRRMADNFIMQSGMDLFYAGFSNNL PPLRFVRNLGLMAAERAGVLKRQALKYALGL >gi|299856439|gb|ADWV01000012.1| GENE 27 35662 - 37086 438 474 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372256|ref|ZP_03855738.1| SSU ribosomal protein S12P methylthiotransferase [Veillonella parvula DSM 2008] # 1 390 1 389 449 173 29 4e-42 MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVF HQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDIIFGPQTLHRLPEMINSVRG DRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDD ILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFADLLRLVAAIDGIDRIRFTTSH PIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNLMGRTHTALEYKAIIRKLRAARPDI QISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQ RLYILQERINQQAMAWSRRMLGTTQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIG KFVDVEITDVYPNSLRGKVVRTEDEMGLRVAETPESVIARTRKENDLGVGYYQP >gi|299856439|gb|ADWV01000012.1| GENE 28 37239 - 38279 1309 346 aa, chain + ## HITS:1 COG:ECs0698 KEGG:ns NR:ns ## COG: ECs0698 COG1702 # Protein_GI_number: 15829952 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Escherichia coli O157:H7 # 1 346 14 359 359 644 99.0 0 MNIDTREITLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVTAAA DILRSLYVDTAPMRGQIQDIEPEQIHLAIKEARVLEQSAESVPEYGKAVNIKTKRGVIKP RTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEK LGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFII LDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFN FFHSEDVVRHPVVARIVNAYEAWEEAEQKRKAALAAERKREEQEQK >gi|299856439|gb|ADWV01000012.1| GENE 29 38276 - 38743 712 155 aa, chain + ## HITS:1 COG:ybeY KEGG:ns NR:ns ## COG: ybeY COG0319 # Protein_GI_number: 16128642 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 155 1 155 155 271 100.0 2e-73 MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIRVVDTAESHSLNLTYRG KDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLL GYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE >gi|299856439|gb|ADWV01000012.1| GENE 30 38833 - 39711 924 292 aa, chain + ## HITS:1 COG:ECs0696 KEGG:ns NR:ns ## COG: ECs0696 COG4535 # Protein_GI_number: 15829950 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorC # Organism: Escherichia coli O157:H7 # 1 292 1 292 292 508 100.0 1e-144 MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDSGQNDLIDEDTRDMLEG VMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAK DLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVT IEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALASIEDFNEAFGTHFSDEEVDTIG GLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQVHVKIPDDSPQPKLDE >gi|299856439|gb|ADWV01000012.1| GENE 31 39736 - 41274 1936 512 aa, chain + ## HITS:1 COG:lnt KEGG:ns NR:ns ## COG: lnt COG0815 # Protein_GI_number: 16128640 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Escherichia coli K12 # 1 512 1 512 512 984 98.0 0 MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGLQALTFNRRPLQSAAIG FCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLSLYTGLFAGVLSRLWPKTT WLRVAIAAPSLWQVTEFLRGWVLTGFPWLQFGYSQIDGPLKGLAPIMGVEAINFLLMMVS GLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQPEKTIQVSMVQGDIPQSLKWDGD QLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEINQQPFLKALDGELRDKGSSLVTGIV DARLNKQNRYDTYNTIITLGKGAPYSYESADRYNKNHLVPFGEFVPLESILRPLAPFFDL PMSSFSRGPYIQPPLSVNGIELTAAICYEIILGEQVRDNFRPDTDYLLTISNDAWFGKSI GPWQHFQMARMRALELARPLLRSTNNGITAVIGPQGEIQAMIPQFTREVLTTNVTPTTGL TPYARTGNWPLWVLTALFGFAAVLMSLRARKR >gi|299856439|gb|ADWV01000012.1| GENE 32 41352 - 43229 638 625 aa, chain - ## HITS:1 COG:RSp1525 KEGG:ns NR:ns ## COG: RSp1525 COG0705 # Protein_GI_number: 17549744 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Ralstonia solanacearum # 45 204 237 394 569 99 39.0 1e-20 MSASSVKPLNVQLPAITLILFALCVGIFCYLAQWMSYEEVDQSALIHLGANVASLTLSGE SWRLFSSVFLHSSFSHLLMNMFALLVVGAVAERILGKWRLLIIWLFSGVFGGLISACYAL RDSDQIVISVGASGAIMGIAGAALATQLASGAGTYHKNQRRVFSLLGMVALTLLYGARQA GIDNACHIGGLIAGGALGWLSARLSGQNRLVTEGGIIVAGSLLLTGAIWLAQQQMDESVL QVRQSLREAFYPQEIEQERRQKKQQLAEERNALRETLSAPVSREQASGDLLAEIADIHDM AISRDGNMLYAAIENTNSIVVFDLGQKKILHTFTAPIAKEKSVKHCGGCKDQGVRSLALS PDEKLIYATSFEANALSVINVATGEIIQSITTGAHPDSLILSRDGTKAWVMNRTSNSVSA IDLVTYQHVADIPLEKYDGTGTSNKPGAWVMALSPDEKILLIPGMVRGDIVRINTITHQK ESYPASDARGTISAMRFRPENGDVIFADSQGISRISVGDQQASIMTQWCSRSVYSVEGIS PDGQYLALVSYGLQGYVILLNINAGQIIGVYPASYVNHLRFSADGRKIFVMAKNGLIQLD RTRSLDPQAIIRHPQYGNVACIPEP >gi|299856439|gb|ADWV01000012.1| GENE 33 43684 - 44592 1219 302 aa, chain + ## HITS:1 COG:STM0665 KEGG:ns NR:ns ## COG: STM0665 COG0834 # Protein_GI_number: 16764042 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 1 302 7 308 308 551 93.0 1e-157 MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQ KVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVER QKQAAFSDTIFVVGTRLLTKKGGDIKDFADLKGKAVVVTSGTTSEVLLNKLNEEQKMNMR IISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGKPQSQEAYGCMLRK DDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPPKNLNMNFELSDEMKALFKEPNDKA LN >gi|299856439|gb|ADWV01000012.1| GENE 34 44762 - 45502 791 246 aa, chain + ## HITS:1 COG:gltJ KEGG:ns NR:ns ## COG: gltJ COG0765 # Protein_GI_number: 16128637 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 246 1 246 246 463 99.0 1e-130 MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRF LSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGL FTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLV KNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMTLVERKVRLP GNMGGK >gi|299856439|gb|ADWV01000012.1| GENE 35 45502 - 46176 718 224 aa, chain + ## HITS:1 COG:ECs0692 KEGG:ns NR:ns ## COG: ECs0692 COG0765 # Protein_GI_number: 15829946 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli O157:H7 # 1 224 1 224 224 370 100.0 1e-102 MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYV NVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGI QSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADF FRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA >gi|299856439|gb|ADWV01000012.1| GENE 36 46176 - 46901 552 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 239 1 242 245 217 45 3e-55 MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITV DGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKAPAREKALKL LERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMV ELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKDAFFDDPKSDRAKDFLAKIL H >gi|299856439|gb|ADWV01000012.1| GENE 37 47019 - 47954 1025 311 aa, chain + ## HITS:1 COG:ECs0690 KEGG:ns NR:ns ## COG: ECs0690 COG1957 # Protein_GI_number: 15829944 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli O157:H7 # 1 311 1 311 311 624 99.0 1e-179 MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTD IPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVT IVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQS GIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLH DPCTIAWLLKPELFTTVERWVGVETQGKYSQGMTVVDYYYLTGNKPNATVMVDVDRQGFV DLLADRLKFYA >gi|299856439|gb|ADWV01000012.1| GENE 38 48038 - 49708 1354 556 aa, chain + ## HITS:1 COG:ECs0689 KEGG:ns NR:ns ## COG: ECs0689 COG0443 # Protein_GI_number: 15829943 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli O157:H7 # 1 554 1 554 556 1092 99.0 0 MDNAELAIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIISMDENNHILVGKPAVSR RTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSVVLRSLKEDAEEFLQRPIKDVVIS VPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGLHTQQNTRSLVFDLGGGTFDV TVLEYATPVIEVHASAGDNFLGGEDFTHMLVDEVLKRADVARTTLNESELAALYACVEAA KCSNQSPLHIRWQYQDETRECEFYENELEDLWLPLLNRLRVPIEQALRDARLKPSQIDSL VLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIVALGAAIQAACRLRSEDIEEVILTDIC PYSLGVEVNRQGISGIFSPIIERNTTVPVSRVETYSTMHPEQDSITVNVYQGENHKVKNN ILVESFDVPLKKTGAYQSIDIRFSYDINGLLEVDVLLEDGSVKSRVINHSPVTLSAQQIE ESRTRLSALKIYPRDMLINRTFKAKLEELWARALGDEREEIGRVITDFDAALQSNDMARV DEVRRRASVYLAIETS >gi|299856439|gb|ADWV01000012.1| GENE 39 49768 - 51219 890 483 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0641 NR:ns ## KEGG: EC55989_0641 # Name: djlC # Def: Hsc56 co-chaperone of HscC # Organism: E.coli_55989 # Pathway: not_defined # 1 483 1 483 483 950 100.0 0 MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQAYEEALRLAVNPVGEA DNEDKDAAAEHEILRAFRTLLDSESDRFQPSAWQKFIQQLNTWNMEDVDQLRWPLCAIAI EARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAIQAGDCFDFLSLLEYPVALQN QTVEYYFALERCCRYHPDYVTAFLAMEGPWFIPDDAKLHRKLLRWYSSVQTGMAELIPVA KQWQAEEPESEDARYYQCAQRLYCGEGESLLAELCAYWESYPSTQADNLLLQWSKRHCPD YFALLVMVIEARSMVDAQGQPLKYVPGESARTRLLWAEILHSGKLSPLGQSFIESLFFKR KAWAWWKSRVGSETEEDSPLLDLYRVAEQVVLEAFPKQEMLARLNTRLEGGDAHPLEAII TRLLLTKVKLEPEDEDVDEPTPENHEEKNDEGEKPQSITSIIKISLTVLVIGYALGKIAM LFS >gi|299856439|gb|ADWV01000012.1| GENE 40 51216 - 51923 497 235 aa, chain - ## HITS:1 COG:no KEGG:EC55989_0640 NR:ns ## KEGG: EC55989_0640 # Name: ybeU # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 235 1 235 235 478 100.0 1e-134 MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFDLSSSWGINNRDDLIQTIYQM TDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFVAQTAMCCGEGGIKAWDYV RMGFLSRVGVLNNWLTEEESLWLQSRVYVRAHHYYHSWMHYFSAYSLGRLYWQSSQCEDN TSLREALTLYKYDSAGSRMFEELAAGSDRFYATLPWQPLTVQPECPVTLKDVSDL >gi|299856439|gb|ADWV01000012.1| GENE 41 52039 - 52578 301 179 aa, chain + ## HITS:1 COG:ECs0685 KEGG:ns NR:ns ## COG: ECs0685 COG0790 # Protein_GI_number: 15829939 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli O157:H7 # 1 179 6 184 184 340 98.0 1e-93 MYIFAIFIVAAITCISQPKKTTLRDKAMVNYAFDYLSSPGSLPLTTAATELSAIHGHSTS QYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAIL WYKEAAEQGYAHAQYTLGLIYRNGTGINVNHYESQKWLKLAAKQHYKNAERLLAGLPAH >gi|299856439|gb|ADWV01000012.1| GENE 42 52588 - 54015 690 475 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_0667 NR:ns ## KEGG: EcSMS35_0667 # Name: not_defined # Def: DnaJ domain-containing protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 475 1 475 475 899 96.0 0 MKNCWKILEIEETTDVDIIRRAYLALLPSFHPETDPQGFKQLRQAYEEALRIAQSPAKSV WQPEEYEVAEHEILLAFRALLASDSERFLPSAWQRFIQQLNYCSMEEIDELRWSLCTIAM NTAHLSFECVVLLAERLRWLQEENVGEIDEEELESFLYAIAKGNVFNFQTILHLPVAVQN DTIDFYQMFARIWSSHPEWLTLYLAQHRAVIIPDDAKLHRNLLRWYSAGRLDIPELLDYA RSWREAEPDNEDARYYEYAQRVYCGEGESLLAELCDYWREYPSTQADALILQWCRQHRVD YYPLVVMMIEARELVNDQGKQLLYVPGDSARTRFHLYEILSDEKLSALGRSLVEMVLHKG RKPRISLTRDTEHPLWPLYLVAKQLVQASQPTEESLMPIVSRLDAEDRCPLEALIIRRLL IQAANFTGQETVEPEPQPQPMPVDDGGLGCLGVIKIIFYIFIFAGLIGKILHLFG >gi|299856439|gb|ADWV01000012.1| GENE 43 54012 - 54719 275 235 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0652 NR:ns ## KEGG: ECO103_0652 # Name: ybeR # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 235 1 235 235 469 100.0 1e-131 MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDARDDLLRTIHRM IDNGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYV RMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYRNWRQYFAGYTFGRQYWQSPEDDHL QLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLAYYSACPETLKDMSDL >gi|299856439|gb|ADWV01000012.1| GENE 44 54883 - 55860 804 325 aa, chain + ## HITS:1 COG:ybeQ KEGG:ns NR:ns ## COG: ybeQ COG0790 # Protein_GI_number: 16128627 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli K12 # 1 325 3 327 327 592 98.0 1e-169 MIFTSTCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQG HCEAQYSLGQKYTEDKSRHKDNEHAIFWLKKAALQGHTFASNALGWILDRGEDPNYKEAV VWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYED GKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSV GAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQAL DLYRKVQSSGTRDVSQEIRETEDLL >gi|299856439|gb|ADWV01000012.1| GENE 45 55930 - 56412 490 160 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1413 NR:ns ## KEGG: APECO1_1413 # Name: ybeL # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 160 1 160 160 305 100.0 2e-82 MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELTRTEVDELTRAVRRDLE EFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVV GLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP >gi|299856439|gb|ADWV01000012.1| GENE 46 56506 - 59229 3215 907 aa, chain + ## HITS:1 COG:ECs0680 KEGG:ns NR:ns ## COG: ECs0680 COG0495 # Protein_GI_number: 15829934 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 48 907 1 860 860 1791 99.0 0 MNNPGIISTSSARKAVLTRTFGLCYADLKNHLNATFVAVLKTGPLAAMQEQYRPEEIESK VQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNV LQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYY RWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFI KITAYADELLNDLDKLDHWPDTVKTMQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTF MGCTYLAVAAGHPLAQKAAENNPELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPL TGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQ ALTEKGVLFNSGEFNGLDHEAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIP MVTLEDGTVMPTPDDQLPVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTF MESSWYYARYTCPEYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGM VNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELV YTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRV WKLVYEHTAKGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELM NKLAKAPTDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEK AMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGK LLNLVVG >gi|299856439|gb|ADWV01000012.1| GENE 47 59244 - 59825 539 193 aa, chain + ## HITS:1 COG:rlpB KEGG:ns NR:ns ## COG: rlpB COG2980 # Protein_GI_number: 16128624 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rare lipoprotein B # Organism: Escherichia coli K12 # 1 193 1 193 193 337 100.0 7e-93 MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPNGPLSRAVRNQLRLNGV ELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIMTVNATVLIPGRDIYPISA KVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLPSIRAADIRSDEEQTSTTTDT PATPARVSTTLGN >gi|299856439|gb|ADWV01000012.1| GENE 48 59825 - 60856 901 343 aa, chain + ## HITS:1 COG:ECs0678 KEGG:ns NR:ns ## COG: ECs0678 COG1466 # Protein_GI_number: 15829932 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Escherichia coli O157:H7 # 1 343 1 343 343 604 99.0 1e-172 MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTD WNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKA QENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLA LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMGEALNRLSQPQLRQ AVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLADVFIDG >gi|299856439|gb|ADWV01000012.1| GENE 49 60858 - 61499 469 213 aa, chain + ## HITS:1 COG:nadD KEGG:ns NR:ns ## COG: nadD COG1057 # Protein_GI_number: 16128622 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Escherichia coli K12 # 1 213 1 213 213 415 100.0 1e-116 MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQPEANSVQRKHML ELAIADKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEY ETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPEDLHLQPAGKIYLAETPWFNIS ATIIRERLQNGESCEDLLPEPVLTYINQQGLYR >gi|299856439|gb|ADWV01000012.1| GENE 50 61523 - 62134 437 203 aa, chain + ## HITS:1 COG:phpB KEGG:ns NR:ns ## COG: phpB COG0406 # Protein_GI_number: 16128621 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Escherichia coli K12 # 1 203 1 203 203 405 98.0 1e-113 MRLWLIRHGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLHGVSFDLVLCSELERAQH TARLVLSDRQLPVHIIPELNEMFFGDWEMRHHRDLMQEDAENYSAWCNDWQHAIPTNGEG FQAFSQRVERFIARLSEFQHYQNILVVSHQGVLSLLIARLIGMPAEAMWHFRVDQGCWST IDINQKFATLRVLNSRAIGVENA >gi|299856439|gb|ADWV01000012.1| GENE 51 62394 - 62711 314 105 aa, chain + ## HITS:1 COG:STM0642 KEGG:ns NR:ns ## COG: STM0642 COG0799 # Protein_GI_number: 16764019 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Salmonella typhimurium LT2 # 1 105 1 105 105 187 97.0 3e-48 MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESR AAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS >gi|299856439|gb|ADWV01000012.1| GENE 52 62715 - 63182 561 155 aa, chain + ## HITS:1 COG:ECs0674 KEGG:ns NR:ns ## COG: ECs0674 COG1576 # Protein_GI_number: 15829928 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 303 99.0 9e-83 MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQM LAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSW SLSTLTLPHPLVRVLVAESLYRAWSITTNHPYHRE >gi|299856439|gb|ADWV01000012.1| GENE 53 63213 - 65114 1990 633 aa, chain + ## HITS:1 COG:ECs0673 KEGG:ns NR:ns ## COG: ECs0673 COG0768 # Protein_GI_number: 15829927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Escherichia coli O157:H7 # 1 633 1 633 633 1294 99.0 0 MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQIVRFTDYQTRSNENRIK LVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTLDALRSVVDLTDDDIAAFR KERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVS KINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDMLHGQTGYEEVEVNNRGRVIRQLK EVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGVLALVSTPSYDPNLFVDG ISSKDYSALLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTTLFDPGWWQL PGSEKRYRDWKKWGHGRLNVTRSLEESADTFFYQVAYDMGIDRLSEWMGKFGYGHYTGID LAEERSGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGIVKV PHLLMSTAEDGKQVPWVQPHEPPVGDIHSGYWELAKDGMYGVANRPNGTAHKYFASAPYK IAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAV GTLMRQILDHIMLGDNNTDLPAENPAVAAAEDH >gi|299856439|gb|ADWV01000012.1| GENE 54 65117 - 66229 1125 370 aa, chain + ## HITS:1 COG:ECs0672 KEGG:ns NR:ns ## COG: ECs0672 COG0772 # Protein_GI_number: 15829926 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Escherichia coli O157:H7 # 1 370 1 370 370 618 100.0 1e-177 MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIGMMERKIGQIAMGLVIM VVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRWLDLGIVRFQPSEIAKIAV PLMVARFINRDVCPPSLKNTGIALVLIFMPTLLVAAQPDLGTSILVALSGLFVLFLSGLS WRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPESDPLGAGYHIIQSKIAIGSGGL RGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVGILILLALYILLIMRGLWIAARAQT TFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIVMSIH THRKMLSKSV >gi|299856439|gb|ADWV01000012.1| GENE 55 66240 - 67328 937 362 aa, chain + ## HITS:1 COG:rlpA KEGG:ns NR:ns ## COG: rlpA COG0797 # Protein_GI_number: 16128616 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Escherichia coli K12 # 1 362 1 362 362 570 99.0 1e-162 MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEISGADPRFEPLNATANQD YQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFDPTQLTAAHPTLPIPSYAR ITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSNNTKVRIDPIIVAQDGSLSGP GMACTTVAKQTYALPAPPDLSGGAGTSSVSGPQGDILPVSNSTLKSEDPTGAPVTSSGFL GAPTTLAPGVLEGSEPTPAPQPVVTAPSTTPATSPAMVTPQAASQSASGNFMVQVGAVSD QARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGPFASKAEASTLQQRLQTEAQLQSFITT AQ >gi|299856439|gb|ADWV01000012.1| GENE 56 67468 - 68679 1331 403 aa, chain + ## HITS:1 COG:ZdacA KEGG:ns NR:ns ## COG: ZdacA COG1686 # Protein_GI_number: 15800346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli O157:H7 EDL933 # 1 403 1 403 403 825 100.0 0 MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVL AEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFL KPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVH GLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDG IKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKV GKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGT INFQLDGKTIEQRPLVVLQEIPEGNFFGKIIDYIKLMFHHWFG >gi|299856439|gb|ADWV01000012.1| GENE 57 68790 - 69053 332 87 aa, chain + ## HITS:1 COG:ECs0669 KEGG:ns NR:ns ## COG: ECs0669 COG2921 # Protein_GI_number: 15829923 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 87 1 87 87 157 100.0 5e-39 MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTPTVKPSSKGNYHSVSI TINATHIEQVETLYEELGKIDIVRMVL >gi|299856439|gb|ADWV01000012.1| GENE 58 69154 - 69795 562 213 aa, chain + ## HITS:1 COG:ECs0668 KEGG:ns NR:ns ## COG: ECs0668 COG0321 # Protein_GI_number: 15829922 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Escherichia coli O157:H7 # 23 213 1 191 191 401 100.0 1e-112 MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHYPVFTQGQAGKAEHILM PGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELVTLLEQTVVNTLAELGIEA HPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDLSPFLRINPCGYAGMEMAKIS QWKPEATTNNIAPRLLENILALLNNPDFEYITA >gi|299856439|gb|ADWV01000012.1| GENE 59 70054 - 71007 691 317 aa, chain + ## HITS:1 COG:ybeF KEGG:ns NR:ns ## COG: ybeF COG0583 # Protein_GI_number: 16128612 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 52 317 1 266 266 524 99.0 1e-149 MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAI SQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYITQGLESILGALDIEGSYDKQRTIT IATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQ HHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQI NFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFS LRDPILHGVIDVIRNAF >gi|299856439|gb|ADWV01000012.1| GENE 60 71216 - 72181 870 321 aa, chain + ## HITS:1 COG:ECs0666 KEGG:ns NR:ns ## COG: ECs0666 COG0320 # Protein_GI_number: 15829920 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 657 100.0 0 MSKPIVMERGVKYRDADKMALIPVKNVATEREALLRKPEWMKIKLPADSTRIQGIKAAMR KNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCDVAHGRPVAPDANEPVKLA QTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKSPQIKIETLVPDFRGRMDRAL DILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLLERFKEAHPEIPTKSGLMVGLGE TNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQRYVSPDEFDEMKAEALAMGFTHAA CGPFVRSSYHADLQAKGMEVK >gi|299856439|gb|ADWV01000012.1| GENE 61 72282 - 72491 178 69 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90022866|ref|YP_528693.1| ribosomal protein L25 [Saccharophagus degradans 2-40] # 1 59 1 59 83 73 57 6e-12 VSMGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMNDDDAAAKKGADVDL QAEKLSHKE >gi|299856439|gb|ADWV01000012.1| GENE 62 72614 - 73402 801 262 aa, chain - ## HITS:1 COG:ECs0664 KEGG:ns NR:ns ## COG: ECs0664 COG0388 # Protein_GI_number: 15829918 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 501 100.0 1e-142 MLVAAGQFAVTSVWEKNAEICASLMAQAAENDVSLFVLPEALLARDDHDADLSVKSAQLL EGEFLGRLRRESKRNMMTTILTIHVPSTPGRAWNMLVALQAGNIVARYAKLHLYDAFAIQ ESRRVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELALAQALQGAEILVLPAAWVRGPLKE HHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPFGVTIAAASEMPALIMAEVTPER VRQVRAQLPVLNNRRFAPPQLL >gi|299856439|gb|ADWV01000012.1| GENE 63 73495 - 73878 193 127 aa, chain + ## HITS:1 COG:ECs0663 KEGG:ns NR:ns ## COG: ECs0663 COG0239 # Protein_GI_number: 15829917 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Escherichia coli O157:H7 # 1 127 1 127 127 202 100.0 1e-52 MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLAANLIGAFIIGMGFAWFSRMTN IDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAFWL FSASTAH >gi|299856439|gb|ADWV01000012.1| GENE 64 73932 - 74141 347 69 aa, chain - ## HITS:1 COG:ECs0662 KEGG:ns NR:ns ## COG: ECs0662 COG1278 # Protein_GI_number: 15829916 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 124 100.0 4e-29 MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG PSAANVIAL >gi|299856439|gb|ADWV01000012.1| GENE 65 74316 - 74876 477 186 aa, chain - ## HITS:1 COG:no KEGG:B21_00581 NR:ns ## KEGG: B21_00581 # Name: crcA # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 186 1 186 186 351 100.0 6e-96 MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHAR FAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRP LADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFA WMRFQF >gi|299856439|gb|ADWV01000012.1| GENE 66 75465 - 76850 1429 461 aa, chain + ## HITS:1 COG:ECs0660 KEGG:ns NR:ns ## COG: ECs0660 COG3069 # Protein_GI_number: 15829914 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 1 461 1 461 461 630 99.0 1e-180 MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAIMGHKVLPSSQASTGYS ATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMVVKLASKPLQYINSPYLLM IAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRGAAAAICASPAAIILAPTSGD VVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFWQRYLDKKEHISHEMLDVSEITT TAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVICMLIASILEFLRSFNTQKVFSGLE VAYRGMADAFANVVMLLVAAGVFAQGLSTISFIQSLISIATSFGSASIILMLVLVILTML AAVTTGSGNAPFYAFVEMIPKLAHSSGINPAYLTIPMLQASNLGRTLSPVSGVVVAVAGM AKISPFEVVKRTSVPVLVGLVIVIVATELMVPGTAAAVTGK >gi|299856439|gb|ADWV01000012.1| GENE 67 76891 - 77571 263 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 5 223 1 221 226 105 28 9e-22 MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFKPGLILLDNYL PDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVFDYLIKPIAYERLGQTLTR FRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGIDPLTLNAVRKLFKEPGVQHTA ETVAQALTISRTTARRYLEYCASRHLIIAEIVHGKVGRPQRIYHSG >gi|299856439|gb|ADWV01000012.1| GENE 68 77540 - 79198 1476 552 aa, chain - ## HITS:1 COG:citA KEGG:ns NR:ns ## COG: citA COG3290 # Protein_GI_number: 16128602 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Escherichia coli K12 # 1 552 1 552 552 1109 99.0 0 MLQLNENKQFAFFQRLAFPLRIFLLILVFSIFVIAALAQYFTASFEDYLTLHVRDMAMNQ AKIIASNDSVISAVKTRDYKRLATIANKLQRDTDFDYVVIGDRHSIRLYHPNPEKIGYPM QFTKQGALEKGESYFITGKGSMGMAMRAKTPIFDDDGKVIGVVSIGYLVSKIDSWRAEFL LPMAGVFVVLLGILMLLSWFLAAHIRRQMMGMEPKQIARVVRQQEALFSSVYEGLIAVDP HGYITAINRNARKMLGLSSPGRQWLGKPIAEVVRPADFFTEQIDEKRQDVVANFNGLSVI ANREAIRSGDDLLGAIISFRSKDEISTLNAQLTQIKQYVESLRTLRHEHLNWMSTLNGLL QMKEYDRVLAMVQGESQAQQQLIDSLREAFADRQVAGLLFGKVQRARELGLKMIIVPGSQ LSQLPPGLDSTEFAAIVGNLLDNAFEASLRSDEGNKIVELFLSDEGDDVVIEVADQGCGV PESLRDKIFEQGVSTRADEPGEHGIGLYLIASYVTRCGGVITLEDNDPCGTLFSIYIPKV KPNDSSINPIDR >gi|299856439|gb|ADWV01000012.1| GENE 69 79578 - 80636 889 352 aa, chain + ## HITS:1 COG:citC KEGG:ns NR:ns ## COG: citC COG3053 # Protein_GI_number: 16128601 # Func_class: C Energy production and conversion # Function: Citrate lyase synthetase # Organism: Escherichia coli K12 # 1 352 30 381 381 722 99.0 0 MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTRDEKLIACGGIAGNIIK CVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYEALFRQCGFSTLTCVPGVM VLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNGHRYLIQQAAAQCDWLHLFLV KEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISRATFPCYFIKEQSVINHCYTEID LKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMRYWLETPTISAPPIELVEIERLRYQ EMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQNLLEHSRQDAAARQKTPA >gi|299856439|gb|ADWV01000012.1| GENE 70 80651 - 80947 282 98 aa, chain + ## HITS:1 COG:ECs0656 KEGG:ns NR:ns ## COG: ECs0656 COG3052 # Protein_GI_number: 15829910 # Func_class: C Energy production and conversion # Function: Citrate lyase, gamma subunit # Organism: Escherichia coli O157:H7 # 1 98 1 98 98 182 100.0 1e-46 MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDAIRTTILDVLARYNVRG VQLNVDDKGALDCILRARLEALLARASGIPALPWEDCQ >gi|299856439|gb|ADWV01000012.1| GENE 71 80944 - 81852 1184 302 aa, chain + ## HITS:1 COG:citE KEGG:ns NR:ns ## COG: citE COG2301 # Protein_GI_number: 16128599 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Escherichia coli K12 # 1 302 6 307 307 542 100.0 1e-154 MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLEDSVALREKDTARRMVY HALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRLPKTDTAQDVLDIEKEILR IEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGIALGAEDYVRNLRTERSPEGT ELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEAAHIKQLGFDGKSLINPRQIDLL HNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNGKMVDGPVIDRARLVLSRAELSGIR EE >gi|299856439|gb|ADWV01000012.1| GENE 72 81863 - 83395 1722 510 aa, chain + ## HITS:1 COG:citF KEGG:ns NR:ns ## COG: citF COG3051 # Protein_GI_number: 16128598 # Func_class: C Energy production and conversion # Function: Citrate lyase, alpha subunit # Organism: Escherichia coli K12 # 1 510 1 510 510 1008 99.0 0 MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDRKLCANLEEAIRRSGLQ DGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSDCHAPLVEHIRQGVVTRIY TSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNIDVAFLGVPSCDEFGNANGYT GKACCGSLGYAMVDADNAKQVVMLTEELLPYPHNPASIEQDQVDLIVKVDRVGDAAKIGA GATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQTGTGGASLAVTRFLEDKMRSRDIRA DFALGGITATMVDLHEKGLIRKLLDVQSFDSHAAQSLARNPNHIEISANQYANWGSKGAS VDRLDVVVLSALEIDTQFNVNVLTGSDGVLRGASGGHCDTAIASALSIIVAPLVRGRIPT LVDNVLTCITPGSSVDILVTDHGIAVNPARPELAERLQEAGIKVVSIEWLRERARLLTGE PQPIEFTDRVVAVVRYRDGSVIDVVHQVKE >gi|299856439|gb|ADWV01000012.1| GENE 73 83399 - 83950 383 183 aa, chain + ## HITS:1 COG:ECs0653 KEGG:ns NR:ns ## COG: ECs0653 COG3697 # Protein_GI_number: 15829907 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase) # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 350 100.0 1e-96 MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPGPIKDSEVTRRI FNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPLGRL WDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKTHQLTDLLNRMEALLNDVDAC NVN >gi|299856439|gb|ADWV01000012.1| GENE 74 83931 - 84803 640 290 aa, chain + ## HITS:1 COG:citG KEGG:ns NR:ns ## COG: citG COG1767 # Protein_GI_number: 16128596 # Func_class: H Coenzyme transport and metabolism # Function: Triphosphoribosyl-dephospho-CoA synthetase # Organism: Escherichia coli K12 # 1 290 3 292 292 557 100.0 1e-158 MPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSA LAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLL CAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSQLTAGQRLYQQLGLTGARGE AEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMAINGDTNVASRGGEGGLRWLQR EAQTLLQKGGIRTPADLDYLRQFDRECIERNLSPGGSADLLILTWFLAQI >gi|299856439|gb|ADWV01000012.1| GENE 75 84854 - 86317 1714 487 aa, chain + ## HITS:1 COG:ECs0651 KEGG:ns NR:ns ## COG: ECs0651 COG0471 # Protein_GI_number: 15829905 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 487 1 487 487 867 100.0 0 MSLAKDNIWKLLAPLVVMGVMFLIPVPDGMPPQAWHYFAVFVAMIVGMILEPIPATAISF IAVTICVIGSNYLLFDAKELADPAFNAQKQALKWGLAGFSSTTVWLVFGAFIFALGYEVS GLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNTARTGGTVFPVIKNLPPLFKS FPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVLGLEFVSKIAGIQISWLQWFLCF LPVGVILLIIAPWLSYVLYKPEITHSEEVATWAGDELKTMGALTRREWTLIGLVLLSLGL WVFGSEVINATAVGLLAVSLMLALHVVPWKDITRYNSAWNTLVNLATLVVMANGLTRSGF IDWFAGTMSTHLEGFSPNATVIVLVLVFYFAHYLFASLSAHTATMLPVILAVGKGIPGVP MEQLCILLVLSIGIMGCLTPYATGPGVIIYGCGYVKSKDYWRLGAIFGVIYISMLLLVGW PILAMWN >gi|299856439|gb|ADWV01000012.1| GENE 76 86413 - 87237 474 274 aa, chain + ## HITS:1 COG:ECs0650 KEGG:ns NR:ns ## COG: ECs0650 COG3719 # Protein_GI_number: 15829904 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease I # Organism: Escherichia coli O157:H7 # 7 274 1 268 268 549 98.0 1e-156 MSSTPIMKAFWRNAALLAVSLLPFSSANAVALQAKQYGDFDRYVLALSWQTGFCQSQHDR NRNERDECHLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFGCATRPIPNLPEA RASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACFGFDPDAYFGTMVRL NQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKLTCQGNPAYLTEIQISI KADAINAPLSANSFLPQPHPGNCGKTFVIDKVGY >gi|299856439|gb|ADWV01000012.1| GENE 77 87467 - 87877 386 136 aa, chain + ## HITS:1 COG:ECs0649 KEGG:ns NR:ns ## COG: ECs0649 COG0782 # Protein_GI_number: 15829903 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 259 100.0 7e-70 MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRV KFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLE VLELEYQPEAAGDYLL >gi|299856439|gb|ADWV01000012.1| GENE 78 87916 - 88104 68 62 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_0696 NR:ns ## KEGG: ECH74115_0696 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 62 1 62 62 92 100.0 6e-18 MHSHPLYAKSAIFPGSHCSLLLQNYSVSFVGITMAEAFYILIGFLIMAAIIVMAVLYLEN HS >gi|299856439|gb|ADWV01000012.1| GENE 79 88108 - 89346 883 412 aa, chain - ## HITS:1 COG:ECs0647 KEGG:ns NR:ns ## COG: ECs0647 COG1063 # Protein_GI_number: 15829901 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 412 1 412 412 833 99.0 0 MKALTYHGPHHVQVENVPDPGIEQADDIILRITATAICGSDLHLYRGKIPQVKHGDIFGH EFMGEVVETGKDVKNLQKGDRVVIPFVIACGDCFFCRMQQYAACENTNAGKGAALNKKQI PAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPPLLSDDKALFLSDILPTAWQAAK NAQIQQGSSVAVYGAGPVGLLTIACARLLGAEQIFVVDHHPYRLRFAADRYGAIPINFDE DSDPAQSIIEQTAGHRGVDAVIDAVGFEAKGSTTETVLTNLKLEGSSGKALRQCIAAVRR GGIVSVPGVYAGFIHGFLFGDAFDKGLTFKMGQTHVHAWLGELLPLIEKGLLKPEEIVTH YMPFEEAARGYEIFEKREEECRKVILVPGAQSAEAAQKAVSGLVNAMPGGTI >gi|299856439|gb|ADWV01000012.1| GENE 80 89465 - 89671 82 68 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_0629 NR:ns ## KEGG: EcE24377A_0629 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 13 68 1 56 56 93 98.0 2e-18 MNNSVILGEEFSVANSFVAQFHFKYINWHNDCLIHNPFSLLIMNKSFAMIIIFIPDICLV LFPYERFL >gi|299856439|gb|ADWV01000012.1| GENE 81 89567 - 89995 506 142 aa, chain + ## HITS:1 COG:ECs0646 KEGG:ns NR:ns ## COG: ECs0646 COG0589 # Protein_GI_number: 15829900 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 142 1 142 142 252 100.0 1e-67 MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHRFAADVRRFEE HLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAEELGADVVVIGSRNPSIST HLLGSNASSVIRHANLPVLVVR >gi|299856439|gb|ADWV01000012.1| GENE 82 90116 - 91681 411 521 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 213 515 2 303 306 162 31 6e-39 MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIAELSDKVTFKEDNSLPV RKPSFLITNPGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPSKEAQSLLEQIRHIDGDFE FETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQNEITDRNVMGVPAVFVNGKE FGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIVGSGPAGAAAAIYSARKGIRTGL MGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEG GLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAV IGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGD GSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNV KGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTKTA >gi|299856439|gb|ADWV01000012.1| GENE 83 91852 - 92415 597 187 aa, chain - ## HITS:1 COG:ECs0644 KEGG:ns NR:ns ## COG: ECs0644 COG0450 # Protein_GI_number: 15829898 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 381 100.0 1e-106 MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEE LQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADR ATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVASHPGEVCPAKWKEGEATLAPS LDLVGKI >gi|299856439|gb|ADWV01000012.1| GENE 84 92787 - 93533 690 248 aa, chain + ## HITS:1 COG:ECs0643 KEGG:ns NR:ns ## COG: ECs0643 COG1651 # Protein_GI_number: 15829897 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Escherichia coli O157:H7 # 12 248 32 268 268 470 99.0 1e-132 MLKKILLLALLPAIAFAEELPAPVKAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYL TPDGKHAISGYMYNEKGENLSNTLIEKEIYAPAGREMWQRMEQSHWLLDGKKDAPVIVYV FADPFCPYCKQFWQQARPWVDSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQEYE SSGGKLKLNVPANVSTEQMKVLSANEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKT LNIIMGNK >gi|299856439|gb|ADWV01000012.1| GENE 85 93742 - 94644 458 300 aa, chain + ## HITS:1 COG:ybdO KEGG:ns NR:ns ## COG: ybdO COG0583 # Protein_GI_number: 16128586 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 300 1 300 300 563 99.0 1e-160 MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRS GKGIAPTTTGLNLHHHLEKNLKGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCL RQDASVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNR HPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAV TDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF >gi|299856439|gb|ADWV01000012.1| GENE 86 94791 - 96011 716 406 aa, chain + ## HITS:1 COG:ECs0641 KEGG:ns NR:ns ## COG: ECs0641 COG3969 # Protein_GI_number: 15829895 # Func_class: R General function prediction only # Function: Predicted phosphoadenosine phosphosulfate sulfotransferase # Organism: Escherichia coli O157:H7 # 1 406 1 406 406 834 99.0 0 MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLMLHLTAELARQMGKKICV LFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNSLSQYQPEWQCWEPDVEWV RQPPQDAITDPDFFSFYQPGMTFEQFVREFAEWFSQKRPAAMMIGIRADESYNRFVAIAS LNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTWYANHQSLCNPLYNLMYQAGVPL RHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVSGVKSGGIYAGHDNHFYGHRKILKP EHLDWQEYALLLLNSMPEKTAEHYRNKIAIYLHWYQKKGIEVPQTQQGDIGAKDIPSWRR ICKVLLNNDYWCRALSFSPTKAKNYQRYNERIKGKRQEWGILCNND >gi|299856439|gb|ADWV01000012.1| GENE 87 95996 - 96613 573 205 aa, chain + ## HITS:1 COG:ECs0640 KEGG:ns NR:ns ## COG: ECs0640 COG1475 # Protein_GI_number: 15829894 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 205 5 209 209 407 99.0 1e-114 MQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYN PNNVAPPEKKLLKKSIEIDGFTQPIVVTHTDKNALEIVDGFHRHEIGKGSSSLKLRLKGY LPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEV LRLKQINGLQELFADRQYSRAWTVK >gi|299856439|gb|ADWV01000012.1| GENE 88 96614 - 97774 1006 386 aa, chain - ## HITS:1 COG:ECs0639 KEGG:ns NR:ns ## COG: ECs0639 COG0436 # Protein_GI_number: 15829893 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli O157:H7 # 1 386 1 386 386 766 98.0 0 MTNNPLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDGPRYLQERLAYHVAQGA NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVIC FDPSYDSYSPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVW QQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHM TGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRD ILVNALNESRLEILPCEGTYFLLVDYSEVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPF PHKLIRLCFAKKESTLLAAAERLRQL >gi|299856439|gb|ADWV01000012.1| GENE 89 97883 - 98971 1204 362 aa, chain + ## HITS:1 COG:ybdH KEGG:ns NR:ns ## COG: ybdH COG0371 # Protein_GI_number: 16128582 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Escherichia coli K12 # 1 362 1 362 362 692 98.0 0 MPHNPIRVVVGPANYFSHPGSFNHLHDFFTDEQLSRAVWIYGKRAIAAAQTKLPPAFGLP GAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTAKALARRLGLPFVAAPTIA ATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIILNAPQQYLLAGIGDTLAKWYE AVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALSDQQNQQLTQSFCDVVDAIIAGG GMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGTKVAYGILVQSALLGQDDVLAQLTG AYQRFHLPTTLAELEVDINNHAEIDKVITHTLRPVESIHYLPVTLTPDTLRAAFEKVESF KA >gi|299856439|gb|ADWV01000012.1| GENE 90 98981 - 99178 263 65 aa, chain - ## HITS:1 COG:ybdD KEGG:ns NR:ns ## COG: ybdD COG2879 # Protein_GI_number: 16132239 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Escherichia coli K12 # 1 65 1 65 65 129 100.0 1e-30 MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKG GARCC >gi|299856439|gb|ADWV01000012.1| GENE 91 99360 - 101465 2715 701 aa, chain - ## HITS:1 COG:cstA KEGG:ns NR:ns ## COG: cstA COG1966 # Protein_GI_number: 16128581 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Escherichia coli K12 # 1 701 1 701 701 1281 99.0 0 MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCIYLIAYRFYGLYIAKNV LAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWL LAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAGVIALVACFMIMVIILAVLAM IVVKALTHSPWGTYTVAFTIPLALFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVA ESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAVGILI MRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQA CFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVLAPAGTADVVASAAQVVSSWG FSITPDTLNQIASEVGEQSIISRAGGAPTLAVGMAYILHGALGGMMDVAFWYHFAILFEA LFILTAVDAGTRAARFMLQDLLGVVSPGLKRTDSLPANLLATALCVLAWGYFLHQGVVDP LGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQK AFSPDAKVGFLAIANKFQAMIDSGNIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLA LFSIKTALAALKEPKPTAKETPYEPMPENVEEIVAQAKGAH >gi|299856439|gb|ADWV01000012.1| GENE 92 101646 - 102059 401 137 aa, chain - ## HITS:1 COG:ybdB KEGG:ns NR:ns ## COG: ybdB COG2050 # Protein_GI_number: 16128580 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 1 137 1 137 137 275 100.0 1e-74 MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAA LAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVCQPLHLGRQNQSWEIVVFD EQGRRCCTCRLGTAVLG >gi|299856439|gb|ADWV01000012.1| GENE 93 102062 - 102808 928 248 aa, chain - ## HITS:1 COG:ECs0635 KEGG:ns NR:ns ## COG: ECs0635 COG1028 # Protein_GI_number: 15829889 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 451 98.0 1e-127 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAGQVA QVCQRLLAETERLDVLINAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRR QRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTD MQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVV DGGSTLGA >gi|299856439|gb|ADWV01000012.1| GENE 94 102808 - 103665 1129 285 aa, chain - ## HITS:1 COG:entB_1 KEGG:ns NR:ns ## COG: entB_1 COG1535 # Protein_GI_number: 16128578 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate hydrolase # Organism: Escherichia coli K12 # 1 215 1 215 215 436 99.0 1e-122 MAIPKLQAYALPESHDIPKNKVDWAFEPQRAALLIHDMQDYFVSFWGENCPMMEQVIANI AALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRSPEQQKVVDRLTPDADDTV LVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALAD FSRDEHLMSLKYVAGRSGRVVMTEELLPAPVPASKAALREVILPLLDESDEPFDDDNLID YGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAWWKLLSREVK >gi|299856439|gb|ADWV01000012.1| GENE 95 103679 - 105289 1534 536 aa, chain - ## HITS:1 COG:entE KEGG:ns NR:ns ## COG: entE COG1021 # Protein_GI_number: 16128577 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Peptide arylation enzymes # Organism: Escherichia coli K12 # 1 536 1 536 536 1087 99.0 0 MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVIDGERQLSYRELNQAADN LACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSHQRSELNAYASQIE PALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLHNDSGEHNLQDAINHPAEDFTATPSP ADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTRQTRYLCAIPAAHNYAMSS PGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALTEGESRAQLA SLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRLDDSAEKIIHTQGYPMC PDDEVWVADAEGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISID PEGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIYAALVSMEDELMGEKSCAYLVV KEPLRAVQVRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRASA >gi|299856439|gb|ADWV01000012.1| GENE 96 105299 - 106474 1198 391 aa, chain - ## HITS:1 COG:ECs0632 KEGG:ns NR:ns ## COG: ECs0632 COG1169 # Protein_GI_number: 15829886 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Escherichia coli O157:H7 # 1 391 1 391 391 756 99.0 0 MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAAL FADAKAQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEKQASARRFTRSQSLNVVER QAIPQQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDAAIDSGVLLERLIAQNPVSYN FHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARRQPDEVLDREAGNRLLASEKDRH EHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWHLATPFEGKANSQENALTLACLLHP TPALSGFPHQAATQVIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCAKLRENQVRLFA GAGIVPASSPLGEWRETGVKLSTMLNVFGLH >gi|299856439|gb|ADWV01000012.1| GENE 97 106663 - 107619 1027 318 aa, chain + ## HITS:1 COG:ECs0631 KEGG:ns NR:ns ## COG: ECs0631 COG4592 # Protein_GI_number: 15829885 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe2+-enterobactin transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 572 99.0 1e-163 MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLESQPQRIVSTSVTLTGSL LAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLYIGEPSAEAVAAQMPDLIL ISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLGEITGHEKQAAERIAQFDKQL AAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQMLEQLGFTLAKLPAGLNASQSQG KRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIYANPLLAHLPAVQNKQVYALGTETF RLDYYSAMQVLERLKALF >gi|299856439|gb|ADWV01000012.1| GENE 98 107623 - 108873 1229 416 aa, chain - ## HITS:1 COG:ybdA KEGG:ns NR:ns ## COG: ybdA COG0477 # Protein_GI_number: 16128574 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 416 1 416 416 574 99.0 1e-163 MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQIQMMTHSTWQVGLSVTL TGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLNALLPEPSLLAIYLLGLWD GFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMIGGLLLATGGVAWNYG LAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFRFLLASPLVGGIALLGGLLTMAS AVRVLYPALADNWQMSAAQIGFLYAAIPLGAAIGALTSGKLAHSARPGLLMLLSTLGSFL AIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYTMLQTQTPEAMLGRINGLWTAQNVTGD AIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLVELRRFRQTPPQVTASDS >gi|299856439|gb|ADWV01000012.1| GENE 99 108972 - 109988 1258 338 aa, chain + ## HITS:1 COG:ECs0629 KEGG:ns NR:ns ## COG: ECs0629 COG0609 # Protein_GI_number: 15829883 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Escherichia coli O157:H7 # 5 338 1 334 334 449 99.0 1e-126 MEVRMSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEALSGTCQSADCTIV LDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSS AQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLTSGIALLNPDV YDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVAR TQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFA DIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA >gi|299856439|gb|ADWV01000012.1| GENE 100 109985 - 110977 980 330 aa, chain + ## HITS:1 COG:fepG KEGG:ns NR:ns ## COG: fepG COG4779 # Protein_GI_number: 16128572 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterobactin transport system, permease component # Organism: Escherichia coli K12 # 1 330 1 330 330 467 99.0 1e-131 MIYVSRRLLITCLLLISACVVAGIWGLRSGAVTLETSQVFAALMGDAPRSMTMVVTEWRL PRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWSGVLVAMVLFGQDLTAIAL AAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVAFNTWLLLKASLETALTAGLW NAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLEMGDDTACALGVSVERSRLLMML VAVVLTAAATALAGPISFIALVAPHIARRISGTARWGLTQAALCGALLLLAADLCAQQLF MPYQLPVGVVTVSLGGIYLIVLLIQESRKK >gi|299856439|gb|ADWV01000012.1| GENE 101 110974 - 111789 197 271 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 8 232 9 228 309 80 25 4e-14 MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED EEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQI DLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTAELIERI YGLRCMIIDDPVAGTPLVVPLGRTAPSTANS >gi|299856439|gb|ADWV01000012.1| GENE 102 111786 - 112919 967 377 aa, chain - ## HITS:1 COG:ECs0626 KEGG:ns NR:ns ## COG: ECs0626 COG3765 # Protein_GI_number: 15829880 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Escherichia coli O157:H7 # 1 377 1 377 377 709 98.0 0 MSSLNIKQGSDAHFPEYPLASPSNNEIDLLNLIAVLWRAKKTVMAVIFAFACAGLLISFI LPQKWTSAAVVTPPEPVQWQELEKTFTKLRVLDLDIKIDRTEAFNLFIKKFQSVSLLEEY LRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNASKKKDEPSLYTSWTLSFTAPT SEEAQTVLSGYIDYISALVVKESLENVRNKLEIKTQFEKEKLAQDRIKTKNQLDANIQRL NYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGADGIERKLEIEKAVTDVAELNGELRN RQYLVEQLTKANINDVNFTPFKYQLSPSLPVKKDGPGKAIIVILSALIGGMVACGSVLLR YAMASRKQDAMMADHLV >gi|299856439|gb|ADWV01000012.1| GENE 103 113135 - 117016 3684 1293 aa, chain - ## HITS:1 COG:entF_1 KEGG:ns NR:ns ## COG: entF_1 COG1020 # Protein_GI_number: 16128569 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Escherichia coli K12 # 1 1060 1 1060 1060 1972 97.0 0 MSQHLPLVAAQPGIWMAEKLSDLPSAWSVAHYVELTGDVDAPLLARAVVVGLAQADTLRM RFTEDNGEVWQWVDDALIFELPEIIDLRTNIDPHGTAQALMLADLQQDLRVDSGKPLVFH QLIHVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTWLRGEPTPASPFTPFADVVEE YQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLAGRSASADILRLKLEFTDGEFRQLA TQLSGVQRTDLALALAALWLGRLCNRMDYAAGFIFMRRLGSAALTASGPVLNVLPLGIHI AAQETLPELATRLAAQLKKMRRHQRYDAEQIVRDSGRAAGEEPLFGPVLNIKVFDYQLDI PGVQTQTHTLATGPVNDLELALFPDEHGDLSIEILANKQRYDEPTLIQHAERLKMLIAQF AADPALLCGDVDIMLPGEYAQLAQINATQVEIPETTLSALVAEQAAKTPDAPALADARYL FSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYP DDRLKMMLEDARPSLLITTDDQLPRFSDVPNLTSLCYNAPLTPQGSAPLQLSQPHHTAYI IFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTGEDVVAQKTPCSFDVSVWEFFWPFIA GAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPQTARQNCATLKQVF CSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVW NTGLRILDAMMHPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGD VARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRVMQALPDVKQAVTHACVINLAAATGG DARQLVGYLVSQSGLPLDTSALQAQLRETLPPHMVPVVLLQLPQLPLSANGKLDRKALPL PELKTQASGRAPKAGSEKIIAAAFASLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQF ARQVTPGQVMVASTVAKLATIIDGEEDSSRRMGFETILPLREGNGPTLFCFHPASGFAWQ FSVLSRYLDPQWSIIGIQSPRPHGPMQTATNLDEVCEAHLATLLEQQPHGPYYLLGYSLG GTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAA QQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIA ELDIYRQDCAHVDIISPGAFVKIGPIIRATLNR >gi|299856439|gb|ADWV01000012.1| GENE 104 117013 - 117231 272 72 aa, chain - ## HITS:1 COG:Z0726 KEGG:ns NR:ns ## COG: Z0726 COG3251 # Protein_GI_number: 15800300 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 72 1 72 72 119 97.0 2e-27 MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCALPAGWDIVCQPQSQASCQQWLEVHWRTL TPANFTQLQEAQ >gi|299856439|gb|ADWV01000012.1| GENE 105 117234 - 118436 758 400 aa, chain - ## HITS:1 COG:ECs0624 KEGG:ns NR:ns ## COG: ECs0624 COG2382 # Protein_GI_number: 15829878 # Func_class: P Inorganic ion transport and metabolism # Function: Enterochelin esterase and related enzymes # Organism: Escherichia coli O157:H7 # 27 400 1 374 374 724 99.0 0 MTALKVGSESWWQSKHGPEWQRLNDEMFEVTFWWRDPQGSEEYSTIKRVWIYITGVTDHH QNSQPQSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIFSAPSPDRLELREGWRKLL PQAIADPLNPQSWKGGRGHAVSALEMPQAPLQPGWDCPQAPEIPAKEIIWKSERLKNSRR VWIFTTGDATAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHR AHELPCNADFWLAVQQELLPLVKAIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGC VLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEGLRIVLEAGIREPMIMRANQALYAQLH PIKESIFWRQVDGGHDALCWRGGLMQGLIDLWQPLFHDRS >gi|299856439|gb|ADWV01000012.1| GENE 106 118679 - 120919 2758 746 aa, chain + ## HITS:1 COG:fepA KEGG:ns NR:ns ## COG: fepA COG4771 # Protein_GI_number: 16128567 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Escherichia coli K12 # 1 746 1 746 746 1441 99.0 0 MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQNLQAPGVSTITADEIRK NPVARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVSSRNSVR QGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEWHGSWD AYFNAPEHKEEGATKRTNFSLTGPLGDEFSFHLYGNLDKTQADAWDINQGHQSARAGTYA TTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNSDAYTRSKYG DETNRLYRQNYALTWNGGWDNGVTTSNWVQYEHTRNSRIPEGLAGGTEGKFNEKATQDFV DIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWNQQRMKDLSSNTQALTGANTGGAIDGVSA TDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLGDDFTL KMGIARAYKAPSLYQTNPNYILYSKGQGCYASAGGCYLQGNDDLKAETSINKEIGLEFKR DGWLAGVTWFRNDYRNKIEAGYVAVGQNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETV MWTNNITYMLKSENKTTGDRLSIIPEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNY KGQPAVGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGA NYIAGAGAYTYNEPGRTWYMSVNTHF >gi|299856439|gb|ADWV01000012.1| GENE 107 121085 - 121714 425 209 aa, chain + ## HITS:1 COG:ECs0622 KEGG:ns NR:ns ## COG: ECs0622 COG2977 # Protein_GI_number: 15829876 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phosphopantetheinyl transferase component of siderophore synthetase # Organism: Escherichia coli O157:H7 # 1 209 1 209 209 422 99.0 1e-118 MVDMKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQHAGRKRKAEHLAGRIAA IYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGATALAVVSRQPIGVDIEEIFSAQTA TELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKASEIQTDAGFLDYQIISWNKQ QVIIHRENEMFAVHWQIKEKIVITLCQHD >gi|299856439|gb|ADWV01000012.1| GENE 108 121836 - 121988 122 50 aa, chain - ## HITS:1 COG:no KEGG:EFER_2525 NR:ns ## KEGG: EFER_2525 # Name: not_defined # Def: putative small toxic membrane polypeptide, putative HokE-like protein (partial) # Organism: E.fergusonii # Pathway: not_defined # 1 50 34 83 83 91 100.0 9e-18 MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK >gi|299856439|gb|ADWV01000012.1| GENE 109 122339 - 122491 128 50 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A0629 NR:ns ## KEGG: EcHS_A0629 # Name: not_defined # Def: Hok/Gef family protein # Organism: E.coli_HS # Pathway: not_defined # 1 50 34 83 83 90 98.0 2e-17 MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKVVLAYEPKK >gi|299856439|gb|ADWV01000012.1| GENE 110 122933 - 124051 892 372 aa, chain + ## HITS:1 COG:ybdK KEGG:ns NR:ns ## COG: ybdK COG2170 # Protein_GI_number: 16128564 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 372 1 372 372 783 98.0 0 MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNEITAGEVKHDITESMLE LATDVCRDINQAAGQFSAMQKVVLQAAADHHLEICGGGTHPFQKWQRQEVCENERYQRTL ENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFAS SRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRV MDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPH TGDRRPLTEDTLRLLEKIAPSAHKMGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIG LVKKHCEIWAGD >gi|299856439|gb|ADWV01000012.1| GENE 111 124117 - 124365 307 82 aa, chain + ## HITS:1 COG:no KEGG:S0495 NR:ns ## KEGG: S0495 # Name: ybdJ # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 82 1 82 82 100 100.0 1e-20 MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVTMFHLMDLSQLYTLLFCLWFL VLGAIEYFVLRFIWRRWFSLAD >gi|299856439|gb|ADWV01000012.1| GENE 112 124430 - 124798 280 122 aa, chain + ## HITS:1 COG:ECs0617 KEGG:ns NR:ns ## COG: ECs0617 COG2315 # Protein_GI_number: 15829871 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 122 1 122 122 248 100.0 2e-66 MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELRGVPFINLKSDPQK SLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLINDSWNLVVDGLAKRDQKRVR PG >gi|299856439|gb|ADWV01000012.1| GENE 113 124892 - 125425 523 177 aa, chain + ## HITS:1 COG:ECs0616 KEGG:ns NR:ns ## COG: ECs0616 COG0778 # Protein_GI_number: 15829870 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 167 1 167 217 325 99.0 3e-89 MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARV AKSAAGNYVFNERKILDASHVVVFCAKTAMDDAWLKLVVDQEDADGRFATPEAKAANDKG RKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDAVPIEGLTPPSSMQNLV >gi|299856439|gb|ADWV01000012.1| GENE 114 125652 - 126899 1355 415 aa, chain + ## HITS:1 COG:ybdG KEGG:ns NR:ns ## COG: ybdG COG0668 # Protein_GI_number: 16128560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli K12 # 1 415 1 415 415 800 99.0 0 MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVVLRTFEKRAIASSRLWL QIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTCAQLWIMMYALLSVFSLLD VILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLLIGQSPAILISGLGAMAAVLM LVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTIP TWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRFLDEDEMQRLNKAHLLKPYLTSRHQ EINEWNRQQGSTESILNLRRMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPGDNGLP LEIYAFTNTVVWLEYESIQADIFDHIFAIVEEFGLRLHQSPTGNDIRSLAGAFKQ >gi|299856439|gb|ADWV01000012.1| GENE 115 126967 - 128343 1682 458 aa, chain - ## HITS:1 COG:pheP KEGG:ns NR:ns ## COG: pheP COG1113 # Protein_GI_number: 16128559 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli K12 # 1 458 1 458 458 838 99.0 0 MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGY GVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELT AAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGL WLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEK SIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVI LVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSRRGVPINSLMLSGAITSLVVLINY LLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQGRETQFKALLYPFGNYLCIAF LGMILLLMCTMDDMRLSAILLPVWIVFLFVAFKTLRRK >gi|299856439|gb|ADWV01000012.1| GENE 116 128445 - 131588 3272 1047 aa, chain - ## HITS:1 COG:ybdE KEGG:ns NR:ns ## COG: ybdE COG3696 # Protein_GI_number: 16128558 # Func_class: P Inorganic ion transport and metabolism # Function: Putative silver efflux pump # Organism: Escherichia coli K12 # 1 1047 1 1047 1047 2029 99.0 0 MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSDVQVIIKTSYPGQAPQI VENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTDPYWARSRVLEYLNQVQGK LPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQDWFLKYELKTIPDVAEVASV GGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAGGSSIELAEAEYMVRASGYLQTL DDFNHIVLKASENGVPVYLRDVAKVQIGPEMRRGIAELNGEGEVAGGVVILRSGKNAREV IAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRAIDNLSGKLLEEFIVVAVVCALFLWHV RSALVAIISLPLGLCIAFIVMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEE WQHQHPDATLDNKTRWQVITDASVEVGPALFISLLIITLSFIPIFTLEGQEGRLFGPLAF TKTYAMAGAALLAIVVIPILMGYWIRGKIPPESSNPLNRFLIRVYHPLLLKVLHWPKTTL LVAALSVLTVLWPLNKVGGEFLPQINEGDLLYMPSTLPGISAAEAASMLQKTDKLIMSVP EVARVFGKTGKAETATDSAPLEMVETTIQLKPQEQWRPGMTMDKIIEELDNTVRLPGLAN LWVPPIRNRIDMLSTGIKSPIGIKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEG GRYINVEINREKAARYGMTVADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSP QALRQLPILTPMKQQITLADVADIKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDL QKAIAEKVQLKPGTSVAFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLI ISSVPFALVGGIWLLWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAEPSLNN PQTFSEQKLDEALYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGM ITAPLLSLFIIPAAYKLMWLHRHRVRK >gi|299856439|gb|ADWV01000012.1| GENE 117 131600 - 132823 1257 407 aa, chain - ## HITS:1 COG:ECs0612 KEGG:ns NR:ns ## COG: ECs0612 COG0845 # Protein_GI_number: 15829866 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 407 1 407 407 770 99.0 0 MKKNALIIGSMIAGGIISAAGFTWFAKAEPPAEKTSTAERKILFWYDPMYPNTRFDKPGK SPFMDMDLVPKYADEESSASGVRIDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYNEYQ YAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEG ILERLRLAGMPEADIRRLIATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQG MDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEI DNADEALKPGMNAWLQLNTASEPMLLIPSQALIDTGSEQRVITVDADGRFVPKRVAVFQA SQGVTALRSGLAEGEKVVSSGLFLIDSEANISGALERMRSESATHAH >gi|299856439|gb|ADWV01000012.1| GENE 118 132839 - 133171 507 110 aa, chain - ## HITS:1 COG:ylcC KEGG:ns NR:ns ## COG: ylcC COG5569 # Protein_GI_number: 16128556 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 110 1 110 110 196 99.0 7e-51 MKKALQVAMFSLFTVIGFNAQANEHHHETMSEVQPQVISATGVVKGIDLESKKITIHHDP IAAVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGNLSLLQDIKVSQ >gi|299856439|gb|ADWV01000012.1| GENE 119 133198 - 134577 478 459 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 12 459 11 457 460 188 28 1e-46 MSPCKLLPFCVALALTGCSLAPDYQRPAMPVPQQFSLSQNGLVNAADNYQNAGWRTFFVD NQVKTLISEALVNNRDLRMATLKVQEARAQYRLTDAGRYPQLNGEGSGSWSGNLKGNTAT TREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAY AQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANN ALQLLLGSYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAA RAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQ QSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYL EVLDAERSLFATRQTLLDLNYARQVNEISLYTALGGGWQ >gi|299856439|gb|ADWV01000012.1| GENE 120 134734 - 135417 782 227 aa, chain + ## HITS:1 COG:ECs0609 KEGG:ns NR:ns ## COG: ECs0609 COG0745 # Protein_GI_number: 15829863 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 227 1 227 227 432 100.0 1e-121 MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGW DIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGA AVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLEFFLRHQGEVLPRSLIASQVW DMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGVGYMLEVPDGQ >gi|299856439|gb|ADWV01000012.1| GENE 121 135407 - 136855 1115 482 aa, chain + ## HITS:1 COG:ECs0608 KEGG:ns NR:ns ## COG: ECs0608 COG0642 # Protein_GI_number: 15829862 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 481 1 481 482 917 97.0 0 MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFAEQDINDLKEISATLER VLNHPDETQARRLMTLEDIVSGYSNVLISLADSHGKTVYHSPGAPDIREFTRDAIPDKDA RGGEVYLLSGPTMMMPGHGHGHMEHSNWRMINLPVGPLVDGKPIYTLYIALSIDFHLHYI NDLMNKLIMTASVISILIVFIVLLAVHKGHAPIRSVSRQIQNITSKDLDVRLDPQTVPIE LEQLVLSFNHMIERIEDVFTRQSNFSADIAHEIRTPITNLITQTEIALSQSRSQKELEDV LYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKKMLNLADEVGKVFDFFEALAEDRGVEL RFVGDKCQVAGDPLMLRRALSNLLSNALRYTPPSEAIVVRCQTVNHQVQVSVENPGTPIA PEHLPRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVVAHKGTVAVTSDARGTRFVIMLPE RE Prediction of potential genes in microbial genomes Time: Sun May 15 15:31:17 2011 Seq name: gi|299856438|gb|ADWV01000013.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont12.1, whole genome shotgun sequence Length of sequence - 134916 bp Number of predicted genes - 128, with homology - 126 Number of transcription units - 79, operones - 28 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 1814 - 1846 3.2 2 2 Tu 1 . - CDS 1853 - 2542 823 ## COG3340 Peptidase E - Prom 2747 - 2806 3.2 + Prom 2675 - 2734 4.3 3 3 Tu 1 . + CDS 2754 - 3626 935 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 4 4 Tu 1 . - CDS 3627 - 3899 376 ## ECH74115_5501 hypothetical protein - Prom 4021 - 4080 5.9 5 5 Op 1 . + CDS 4428 - 5555 1157 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 6 5 Op 2 . + CDS 5561 - 6352 782 ## COG3541 Predicted nucleotidyltransferase - Term 6344 - 6374 -1.0 7 6 Tu 1 . - CDS 6388 - 7314 396 ## EC55989_4511 putative zeta toxin; poison-antidote element - Prom 7339 - 7398 5.5 8 7 Tu 1 . - CDS 7459 - 8808 1414 ## COG0527 Aspartokinases + Prom 9239 - 9298 5.4 9 8 Tu 1 . + CDS 9333 - 10982 2064 ## COG0166 Glucose-6-phosphate isomerase + Term 11000 - 11036 7.3 + Prom 11133 - 11192 7.0 10 9 Tu 1 . + CDS 11337 - 11579 184 ## + Term 11651 - 11678 0.1 + Prom 11598 - 11657 2.6 11 10 Op 1 . + CDS 11693 - 12331 644 ## ECO103_4775 putative lipoprotein 12 10 Op 2 . + CDS 12328 - 13065 601 ## EC55989_4516 hypothetical protein 13 10 Op 3 . + CDS 13065 - 15161 2278 ## EC55989_4517 putative porin + Term 15173 - 15215 1.8 + Prom 15565 - 15624 2.5 14 11 Tu 1 . + CDS 15755 - 16165 572 ## COG3223 Predicted membrane protein + Term 16204 - 16248 1.9 - Term 16159 - 16198 7.3 15 12 Tu 1 . - CDS 16209 - 17684 1576 ## COG0477 Permeases of the major facilitator superfamily - Prom 17807 - 17866 5.3 - Term 17955 - 17985 3.0 16 13 Op 1 20/0.000 - CDS 18056 - 18946 1136 ## COG3833 ABC-type maltose transport systems, permease component 17 13 Op 2 19/0.000 - CDS 18961 - 20505 1557 ## COG1175 ABC-type sugar transport systems, permease components - Prom 20576 - 20635 5.8 - Term 20549 - 20594 2.7 18 13 Op 3 . - CDS 20659 - 21849 1468 ## COG2182 Maltose-binding periplasmic proteins/domains + Prom 22107 - 22166 2.0 19 14 Op 1 5/0.250 + CDS 22214 - 23329 1222 ## COG3839 ABC-type sugar transport systems, ATPase components 20 14 Op 2 . + CDS 23404 - 24741 1636 ## COG4580 Maltoporin (phage lambda and maltose receptor) + Term 24927 - 24977 1.3 + Prom 24840 - 24899 4.2 21 15 Tu 1 . + CDS 24984 - 25904 796 ## ECUMN_4571 maltose regulon periplasmic protein + Term 25937 - 25968 3.2 + Prom 25948 - 26007 7.2 22 16 Tu 1 . + CDS 26175 - 26327 87 ## COG1357 Uncharacterized low-complexity proteins + Prom 26796 - 26855 4.9 23 17 Tu 1 . + CDS 26976 - 27713 366 ## COG1357 Uncharacterized low-complexity proteins + Prom 27853 - 27912 4.2 24 18 Op 1 6/0.100 + CDS 27936 - 28433 588 ## COG3161 4-hydroxybenzoate synthetase (chorismate lyase) 25 18 Op 2 . + CDS 28446 - 29318 1009 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases + Term 29331 - 29360 2.1 - Term 29316 - 29352 5.8 26 19 Tu 1 . - CDS 29473 - 31956 2651 ## COG2937 Glycerol-3-phosphate O-acyltransferase - Prom 32067 - 32126 6.0 + Prom 31808 - 31867 4.0 27 20 Tu 1 . + CDS 32067 - 32435 459 ## COG0818 Diacylglycerol kinase + Term 32448 - 32485 -1.0 + Prom 32458 - 32517 8.2 28 21 Op 1 1/0.950 + CDS 32545 - 33153 604 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) + Term 33165 - 33204 8.9 29 21 Op 2 . + CDS 33226 - 34551 1477 ## COG0534 Na+-driven multidrug efflux pump + Prom 34556 - 34615 2.5 30 22 Tu 1 . + CDS 34667 - 34876 359 ## COG3237 Uncharacterized protein conserved in bacteria 31 23 Tu 1 . - CDS 34918 - 35433 497 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 35664 - 35723 4.5 + Prom 35541 - 35600 6.9 32 24 Tu 1 . + CDS 35751 - 36773 520 ## EcE24377A_4600 hypothetical protein + Term 36815 - 36848 2.4 + Prom 36878 - 36937 6.1 33 25 Tu 1 . + CDS 37137 - 38174 1136 ## COG0042 tRNA-dihydrouridine synthase + Term 38205 - 38242 7.0 + Prom 38222 - 38281 4.4 34 26 Tu 1 . + CDS 38308 - 38550 422 ## ECIAI39_4470 phage shock protein G + Term 38683 - 38724 5.4 - Term 38674 - 38707 4.1 35 27 Tu 1 . - CDS 38716 - 39699 842 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 39772 - 39831 1.7 + Prom 39668 - 39727 3.2 36 28 Op 1 9/0.050 + CDS 39782 - 41197 1570 ## COG0305 Replicative DNA helicase 37 28 Op 2 5/0.250 + CDS 41250 - 42329 1027 ## COG0787 Alanine racemase + Prom 42342 - 42401 3.7 38 29 Tu 1 . + CDS 42582 - 43775 1198 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase + Term 43879 - 43917 -0.5 - Term 43773 - 43808 6.5 39 30 Tu 1 . - CDS 43997 - 44539 267 ## EC55989_4548 hypothetical protein + Prom 44681 - 44740 7.2 40 31 Tu 1 . + CDS 44902 - 45615 588 ## COG3700 Acid phosphatase (class B) + Prom 45643 - 45702 3.3 41 32 Op 1 4/0.500 + CDS 45726 - 46142 395 ## COG0432 Uncharacterized conserved protein 42 32 Op 2 . + CDS 46146 - 46502 484 ## COG2315 Uncharacterized protein conserved in bacteria - Term 46499 - 46529 3.4 43 33 Tu 1 . - CDS 46537 - 49359 3176 ## COG0178 Excinuclease ATPase subunit - Prom 49420 - 49479 5.0 + Prom 49527 - 49586 5.6 44 34 Tu 1 . + CDS 49613 - 50149 758 ## COG0629 Single-stranded DNA-binding protein + Term 50222 - 50250 1.4 - Term 50207 - 50241 5.2 45 35 Tu 1 . - CDS 50248 - 50529 265 ## ECSE_4354 hypothetical protein + Prom 50832 - 50891 3.7 46 36 Tu 1 . + CDS 50959 - 52545 1145 ## COG4943 Predicted signal transduction protein containing sensor and EAL domains - Term 52501 - 52542 7.7 47 37 Tu 1 . - CDS 52548 - 52871 284 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 52912 - 52971 5.8 + Prom 52874 - 52933 5.6 48 38 Tu 1 . + CDS 52957 - 53421 491 ## COG0789 Predicted transcriptional regulators + Term 53423 - 53449 -0.7 49 39 Tu 1 . + CDS 53967 - 55316 1598 ## COG2252 Permeases + Term 55332 - 55375 9.2 + Prom 55356 - 55415 3.8 50 40 Tu 1 . + CDS 55467 - 57116 1699 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters - Term 57145 - 57174 1.4 51 41 Tu 1 . - CDS 57270 - 58013 352 ## COG1357 Uncharacterized low-complexity proteins - Prom 58236 - 58295 5.4 - Term 58693 - 58730 7.8 52 42 Op 1 10/0.000 - CDS 58740 - 60389 2205 ## COG4147 Predicted symporter 53 42 Op 2 5/0.250 - CDS 60386 - 60700 349 ## COG3162 Predicted membrane protein - Prom 60752 - 60811 4.2 - Term 60817 - 60861 4.1 54 43 Tu 1 . - CDS 60900 - 62858 2359 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - Prom 63084 - 63143 7.0 55 44 Op 1 . + CDS 63250 - 64686 1610 ## COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit 56 44 Op 2 . + CDS 64731 - 65297 365 ## G2583_4896 NrfB, formate-dependent nitrite reductase 57 44 Op 3 8/0.050 + CDS 65294 - 65965 426 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 58 44 Op 4 5/0.250 + CDS 65962 - 66918 1295 ## COG3301 Formate-dependent nitrite reductase, membrane component + Term 66919 - 66955 -0.9 59 45 Op 1 7/0.100 + CDS 67052 - 68656 1263 ## COG1138 Cytochrome c biogenesis factor 60 45 Op 2 9/0.050 + CDS 68649 - 69032 363 ## COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes 61 45 Op 3 4/0.500 + CDS 69029 - 69625 661 ## COG4235 Cytochrome c biogenesis factor + Prom 69660 - 69719 7.1 62 46 Tu 1 . + CDS 69967 - 71280 1737 ## COG1301 Na+/H+-dicarboxylate symporters - Term 71276 - 71311 3.3 63 47 Tu 1 4/0.500 - CDS 71358 - 72047 578 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 72071 - 72130 5.1 - Term 72095 - 72126 4.1 64 48 Op 1 5/0.250 - CDS 72141 - 73820 1898 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 65 48 Op 2 3/0.750 - CDS 73869 - 74288 323 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 74350 - 74409 4.2 - Term 74442 - 74479 6.2 66 49 Op 1 2/0.850 - CDS 74486 - 75952 1563 ## COG1538 Outer membrane protein 67 49 Op 2 6/0.100 - CDS 75949 - 78000 1533 ## COG1289 Predicted membrane protein 68 49 Op 3 . - CDS 78000 - 79031 1011 ## COG1566 Multidrug resistance efflux pump 69 49 Op 4 . - CDS 79050 - 79325 192 ## SSON_4264 formate dehydrogenase H - Prom 79448 - 79507 13.3 - Term 79484 - 79525 10.3 70 50 Tu 1 . - CDS 79534 - 81519 2300 ## COG2015 Alkyl sulfatase and related hydrolases - Prom 81717 - 81776 10.8 + Prom 81680 - 81739 4.4 71 51 Op 1 . + CDS 81772 - 82089 227 ## COG0698 Ribose 5-phosphate isomerase RpiB 72 51 Op 2 . + CDS 82158 - 82487 234 ## B21_03923 hypothetical protein 73 52 Op 1 3/0.750 - CDS 82634 - 83392 632 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 74 52 Op 2 3/0.750 - CDS 83394 - 83828 557 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 75 52 Op 3 7/0.100 - CDS 83815 - 84372 434 ## COG3709 Uncharacterized component of phosphonate metabolism 76 52 Op 4 6/0.100 - CDS 84372 - 85508 1143 ## COG3454 Metal-dependent hydrolase involved in phosphonate metabolism 77 52 Op 5 7/0.100 - CDS 85505 - 86185 223 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 86225 - 86284 1.9 78 53 Op 1 7/0.100 - CDS 86296 - 87054 376 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 79 53 Op 2 8/0.050 - CDS 87051 - 87896 821 ## COG3627 Uncharacterized enzyme of phosphonate metabolism 80 53 Op 3 8/0.050 - CDS 87889 - 88953 1207 ## COG3626 Uncharacterized enzyme of phosphonate metabolism 81 53 Op 4 9/0.050 - CDS 88953 - 89537 682 ## COG3625 Uncharacterized enzyme of phosphonate metabolism 82 53 Op 5 5/0.250 - CDS 89534 - 89986 503 ## COG3624 Uncharacterized enzyme of phosphonate metabolism 83 53 Op 6 3/0.750 - CDS 89987 - 90712 620 ## COG2188 Transcriptional regulators 84 53 Op 7 8/0.050 - CDS 90733 - 91512 955 ## COG3639 ABC-type phosphate/phosphonate transport system, permease component 85 54 Op 1 15/0.000 - CDS 91618 - 92634 1043 ## COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component 86 54 Op 2 3/0.750 - CDS 92659 - 93447 261 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 93500 - 93559 4.5 87 55 Tu 1 . - CDS 93580 - 94023 507 ## COG2764 Uncharacterized protein conserved in bacteria - Prom 94048 - 94107 2.5 88 56 Tu 1 . - CDS 94183 - 94518 453 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism + Prom 94685 - 94744 8.7 89 57 Op 1 . + CDS 94920 - 97148 1851 ## COG0699 Predicted GTPases (dynamin-related) 90 57 Op 2 . + CDS 97145 - 98023 543 ## EC55989_4600 hypothetical protein + Prom 98098 - 98157 3.2 91 58 Tu 1 . + CDS 98287 - 99789 1676 ## COG0477 Permeases of the major facilitator superfamily + Prom 99820 - 99879 1.6 92 59 Tu 1 . + CDS 99901 - 99990 109 ## 93 60 Op 1 40/0.000 - CDS 99966 - 101057 889 ## COG0642 Signal transduction histidine kinase 94 60 Op 2 3/0.750 - CDS 101067 - 101735 896 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 95 60 Op 3 3/0.750 - CDS 101732 - 103375 1450 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Term 103410 - 103457 8.2 96 61 Op 1 . - CDS 103479 - 104816 1435 ## COG0531 Amino acid transporters - Prom 104857 - 104916 3.9 97 61 Op 2 . - CDS 104953 - 105714 417 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 105791 - 105850 6.1 - Term 105890 - 105921 1.1 98 62 Tu 1 . - CDS 106039 - 108306 2098 ## COG1982 Arginine/lysine/ornithine decarboxylases - Prom 108428 - 108487 7.2 99 63 Tu 1 . - CDS 108505 - 109413 836 ## COG2207 AraC-type DNA-binding domain-containing proteins 100 64 Tu 1 4/0.500 + CDS 109699 - 111051 1304 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 101 65 Tu 1 . + CDS 111166 - 112575 1014 ## COG2211 Na+/melibiose symporter and related transporters + Term 112598 - 112639 6.1 102 66 Tu 1 . - CDS 112714 - 113343 656 ## COG3647 Predicted membrane protein - Prom 113366 - 113425 2.5 103 67 Op 1 4/0.500 - CDS 113466 - 115112 508 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase - Term 115139 - 115180 6.0 104 67 Op 2 3/0.750 - CDS 115190 - 116530 1571 ## COG2704 Anaerobic C4-dicarboxylate transporter - Prom 116553 - 116612 2.9 105 68 Op 1 9/0.050 - CDS 117101 - 117820 278 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 106 68 Op 2 . - CDS 117817 - 119448 1418 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism - Prom 119472 - 119531 2.9 107 69 Op 1 . + CDS 119440 - 119574 84 ## EcSMS35_4593 hypothetical protein 108 69 Op 2 5/0.250 + CDS 119629 - 119859 236 ## COG3592 Uncharacterized conserved protein 109 69 Op 3 . + CDS 119871 - 120143 363 ## COG2388 Predicted acetyltransferase 110 70 Tu 1 . - CDS 120073 - 120264 131 ## gi|293407852|ref|ZP_06651692.1| predicted protein - Prom 120360 - 120419 3.3 + Prom 120222 - 120281 1.7 111 71 Op 1 . + CDS 120370 - 120666 252 ## ECUMN_4661 hypothetical protein 112 71 Op 2 . + CDS 120694 - 120867 184 ## ECH74115_5644 hypothetical protein + Term 120946 - 120981 6.7 - Term 120934 - 120969 6.7 113 72 Tu 1 . - CDS 120986 - 122503 1613 ## COG1190 Lysyl-tRNA synthetase (class II) - Prom 122586 - 122645 5.5 114 73 Tu 1 4/0.500 - CDS 122740 - 124197 1318 ## COG3104 Dipeptide/tripeptide permease - Term 124205 - 124248 6.3 115 74 Op 1 10/0.000 - CDS 124256 - 126403 2478 ## COG1982 Arginine/lysine/ornithine decarboxylases - Term 126412 - 126467 3.0 116 74 Op 2 . - CDS 126483 - 127817 1524 ## COG0531 Amino acid transporters - Term 128141 - 128177 2.2 117 75 Op 1 . - CDS 128183 - 129238 662 ## ECO103_4885 DNA-binding transcriptional activator CadC 118 75 Op 2 . - CDS 129214 - 129375 59 ## COG3710 DNA-binding winged-HTH domains - Prom 129417 - 129476 2.2 119 76 Tu 1 . + CDS 130007 - 130225 63 ## EC55989_4627 hypothetical protein + Term 130305 - 130336 4.1 - Term 130293 - 130324 4.1 120 77 Tu 1 . - CDS 130469 - 131311 384 ## G2583_3676 hypothetical protein - Term 131330 - 131368 5.1 121 78 Op 1 . - CDS 131396 - 131593 92 ## ECP_3018 hypothetical protein 122 78 Op 2 . - CDS 131605 - 132093 210 ## ECP_3017 hypothetical protein 123 78 Op 3 . - CDS 132090 - 132467 250 ## ECP_3016 hypothetical protein - Prom 132487 - 132546 2.7 124 79 Op 1 . - CDS 132557 - 132985 204 ## ECP_3015 hypothetical protein 125 79 Op 2 . - CDS 132999 - 133220 323 ## ECP_3014 hypothetical protein 126 79 Op 3 . - CDS 133289 - 133765 441 ## COG2003 DNA repair proteins 127 79 Op 4 . - CDS 133781 - 134266 547 ## ECO111_0312 hypothetical protein 128 79 Op 5 . - CDS 134357 - 134743 370 ## ECO26_3416 hypothetical protein Predicted protein(s) >gi|299856438|gb|ADWV01000013.1| GENE 1 131 - 1762 1701 543 aa, chain + ## HITS:1 COG:yjbB KEGG:ns NR:ns ## COG: yjbB COG1283 # Protein_GI_number: 16131846 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Escherichia coli K12 # 1 543 1 543 543 945 100.0 0 MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKKPLAFCAGIGVTALVQS SNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTFDLSWLSPLLIFIGVIFFL GRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGVQVIFASLTGDILLDALIGAM FAIISYSSLAAVLLTATLTAAGIISFPVALCLVIGANLGSGLLAMLNNSAANAAARRVAL GSLLFKLVGSLIILPFVHLLAETMGKLSLPKAELVIYFHVFYNLVRCLVMLPFVDPMARF CKTIIRDEPELDTQLRPKHLDVSALDTPTLALANAARETLRIGDAMEQMMEGLNKVMHGE PRQEKELRKLADDINVLYTAIKLYLARMPKEELAEEESRRWAEIIEMSLNLEQASDIVER MGSEIADKSLAARRAFSLDGLKELDALYEQLLSNLKLAMSVFFSGDVTSARRLRRSKHRF RILNRRYSHAHVDRLHQQNVQSIETSSLHLGLLGDMQRLNSLFCSVAYSVLEQPDEDEGR DEY >gi|299856438|gb|ADWV01000013.1| GENE 2 1853 - 2542 823 229 aa, chain - ## HITS:1 COG:ECs4939 KEGG:ns NR:ns ## COG: ECs4939 COG3340 # Protein_GI_number: 15834193 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 452 100.0 1e-127 MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQTWDDYTAKTAAVLAPL GVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGLLAPITDVVKRGALYIGWS AGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTNALPEGHKGETREQRIRELLV VAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGEEAVPLEAGHRF >gi|299856438|gb|ADWV01000013.1| GENE 3 2754 - 3626 935 290 aa, chain + ## HITS:1 COG:ECs5005 KEGG:ns NR:ns ## COG: ECs5005 COG1187 # Protein_GI_number: 15834259 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 517 99.0 1e-146 MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG DLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPILGTVTKKCKVKKEAPFVFRIT LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS SEAKPKVKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR >gi|299856438|gb|ADWV01000013.1| GENE 4 3627 - 3899 376 90 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_5501 NR:ns ## KEGG: ECH74115_5501 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 90 1 90 90 116 100.0 2e-25 MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKKEYIDKLMVEREAEAKK ARQLKKKQAYKPDPEASFSWSANTSTRGRR >gi|299856438|gb|ADWV01000013.1| GENE 5 4428 - 5555 1157 375 aa, chain + ## HITS:1 COG:PA4582 KEGG:ns NR:ns ## COG: PA4582 COG0330 # Protein_GI_number: 15599778 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Pseudomonas aeruginosa # 1 374 3 379 381 385 56.0 1e-107 MIKKISVRKDQLALLSRNGDYYKVLHAGEHLLPWLNTPEVLLITLDGSEVPDVLADYLRR FQPDWVEKYCLVADLSEIEAGALYMDGILLEILPPSTRRLYWRVEDDLTLVRMNTQQVQV QTEVMNAVLQPRRKGAVKGRDAILTVQVPAWHVGVLKIDGETQALLPPGLTAYWKINHLV EAEVVDTRLQVLEVSGQEILTKDKVNLRINLAANWRYSDVLLAFSQLTKPIDHLYRELQF ALREAVGTRTLDELLEDKQVIDDVVSEQVKSRMLPFGMEIASLGVKDIVLPGDMKNILAQ LVEAEKSAQANVIRRREETAATRSLLNTAKVMENNPVALRLKELETLERVAERIDNISVF GGLDQVLHGLVNIKG >gi|299856438|gb|ADWV01000013.1| GENE 6 5561 - 6352 782 263 aa, chain + ## HITS:1 COG:RSc0225 KEGG:ns NR:ns ## COG: RSc0225 COG3541 # Protein_GI_number: 17544944 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Ralstonia solanacearum # 6 260 21 274 281 291 59.0 7e-79 MPLNGVSAAMRERVSQQLKEIERRYGVKVLYACESGSRGWGFASPDSDYDVRFLYVHPLE WYLRVEPPRDVIELPIDDELDVSGWEWRKALGLLKGANPTLIEWLDSPVVYQQDEETITA LKAMVPMWFSPLRARWHYYSMAQKNFRGYLQGDEVRLKKYFYVLRPLLAVRWVEAGKGVP PMRFAELLAGSELDAPLRAEIDELLERKQRAGEAEYGPRRPLLHAFIRAEQARGEIPPLL PDSREGDVKELDSLMYQTVMRRA >gi|299856438|gb|ADWV01000013.1| GENE 7 6388 - 7314 396 308 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4511 NR:ns ## KEGG: EC55989_4511 # Name: not_defined # Def: putative zeta toxin; poison-antidote element # Organism: E.coli_55989 # Pathway: not_defined # 1 308 3 310 310 593 100.0 1e-168 MATLMEKDALLNGASQCIAFLSNIIDNCSVSSHQDSGDALKRLVSYRDYLYSTPAELVDF TQGKILLQQVRTQYQHEFNNTTHSENKASFDSIWQRLTNHEVTPQQHPIGFVLGGQPGAG KSSLIELAKRETKDNIMIINGDDFRFLHPDFNYIYQNYGDDFVTHTAKFSGETVERAIER AIVSKLNIVVEGTFRNAATPLQTLKKLKDAGYQTEVMIKTTSAALSWESTNERYSKDKEA GNIARKVDKNHHDIVTGLLAENARKVFASNLSDKFAVYSREKMIFSSQAATNDDIATLIQ NEISGNTQ >gi|299856438|gb|ADWV01000013.1| GENE 8 7459 - 8808 1414 449 aa, chain - ## HITS:1 COG:ECs5007 KEGG:ns NR:ns ## COG: ECs5007 COG0527 # Protein_GI_number: 15834261 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Escherichia coli O157:H7 # 1 449 1 449 449 783 99.0 0 MSEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGITNLLVALAEGLEPGER FEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAAALATSPALTDELVSHGEL MSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDVAALAELAALQLLPRLNDGLVI TQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRI DEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKDPRAGGTLVCNKTENPPLFR ALALRRNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITTSEVSVALTLDTTGSTS TGDTLLTQSLLMELSALCRVEVEEGLALVALIGNDLSKACGVGKEVFGVLEPFNIRMICY GASSHNLCFLVPGEDAEQVVQKLHFNLFE >gi|299856438|gb|ADWV01000013.1| GENE 9 9333 - 10982 2064 549 aa, chain + ## HITS:1 COG:ECs5008 KEGG:ns NR:ns ## COG: ECs5008 COG0166 # Protein_GI_number: 15834262 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Escherichia coli O157:H7 # 1 549 1 549 549 1134 100.0 0 MKNINPTQTAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSATFDDQMLVDYSKNRITE ETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALRNRSNTPILVDGKDVMPEV NAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDLGPYMVTEALRPYKNHLNMHF VSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTNAHSARDWFLKAAGDEKHVAKHF AALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSAIGLSIVLSIGFDNFVELLSGAHAM DKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEAILPYDQYMHRFAAYFQQGNMESNGKY VDRNGNVVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKMVPCDFIAPAITHNPLSDHHQKL LSNFFAQTEALAFGKSREVVEQEYRDQGKDPATLDYVVPFKVFEGNRPTNSILLREITPF SLGALIALYEHKIFTQGVILNIFTFDQWGVELGKQLANRILPELKDDKEISSHDSSTNGL INRYKAWRG >gi|299856438|gb|ADWV01000013.1| GENE 10 11337 - 11579 184 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAA TGGGDGSNTGTTTTTTTSTQ >gi|299856438|gb|ADWV01000013.1| GENE 11 11693 - 12331 644 212 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4775 NR:ns ## KEGG: ECO103_4775 # Name: yjbF # Def: putative lipoprotein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 212 1 212 212 413 99.0 1e-114 MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGP QLFVVLAFAEDGQQKWVTQDQATLVIQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIVD GATWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDETPVRVLDEEVSTDQARWHNRY WIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ >gi|299856438|gb|ADWV01000013.1| GENE 12 12328 - 13065 601 245 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4516 NR:ns ## KEGG: EC55989_4516 # Name: yjbG # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 245 1 245 245 434 100.0 1e-120 MIKQTIVALILSVGASSVFAAGTVKVFSNGSSEAKTLTGAEYLIDLVGQPRLANSWWPGA VISEELATAAALRQQQALLTRLAELAADSSADDAAAINALRQQIQALKVTGRQKINLDPD IVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSGQNLLSGA DRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLT QRIPQ >gi|299856438|gb|ADWV01000013.1| GENE 13 13065 - 15161 2278 698 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4517 NR:ns ## KEGG: EC55989_4517 # Name: yjbH # Def: putative porin # Organism: E.coli_55989 # Pathway: not_defined # 1 698 1 698 698 1416 100.0 0 MKKRHLLSLLALGISTACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDN DQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWL PQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGYLGTSGNVKNPLCSASDKYCY RDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQ HSVVANQLTLLKYNAGLADPQIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGI KTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETKLAQKRVEPVVPQSTEQGWYIDK SRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYT NPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEV LYRPLDSNWAFGLDANYVKQRDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV GQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGEGDFTKGVYVSVPLDLFSSGP TRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR >gi|299856438|gb|ADWV01000013.1| GENE 14 15755 - 16165 572 136 aa, chain + ## HITS:1 COG:yjbA KEGG:ns NR:ns ## COG: yjbA COG3223 # Protein_GI_number: 16131856 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 136 1 136 136 199 100.0 2e-51 MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLADVLFAPEQTSKYELVEG LVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHKSPLDVLIYSAAILL LVITLWLCNSKRLKRE >gi|299856438|gb|ADWV01000013.1| GENE 15 16209 - 17684 1576 491 aa, chain - ## HITS:1 COG:ECs5014 KEGG:ns NR:ns ## COG: ECs5014 COG0477 # Protein_GI_number: 15834268 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 491 1 491 491 936 99.0 0 MNTQYNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFC VASALIGCIIGGALGGYCSSRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPV YLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYC VNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGIL RKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSILQQFVGINVVLYYA PEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLG TAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANY FVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWEP ETKKTQQTATL >gi|299856438|gb|ADWV01000013.1| GENE 16 18056 - 18946 1136 296 aa, chain - ## HITS:1 COG:ECs5015 KEGG:ns NR:ns ## COG: ECs5015 COG3833 # Protein_GI_number: 15834269 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Escherichia coli O157:H7 # 1 296 1 296 296 519 100.0 1e-147 MAMVQPKSQKARLFITHLLLLLFIAAIMFPLLMVVAISLRQGNFATGSLIPEQISWDHWK LALGFSVEQADGRITPPPFPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKAT LLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHGGVIFAYLGGIALHVWTIKGY FETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDV NSYTLAVGMQQYLNPQNYLWGDFAAAAVMSALPITIVFLLAQRWLVNGLTAGGVKG >gi|299856438|gb|ADWV01000013.1| GENE 17 18961 - 20505 1557 514 aa, chain - ## HITS:1 COG:malF KEGG:ns NR:ns ## COG: malF COG1175 # Protein_GI_number: 16131859 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Escherichia coli K12 # 1 514 1 514 514 978 100.0 0 MDVIKKKHWWQSDALKWSVLGLLGLLVGYLVVLMYAQGEYLFAITTLILSSAGLYIFANR KAYAWRYVYPGMAGMGLFVLFPLVCTIAIAFTNYSSTNQLTFERAQEVLLDRSWQAGKTY NFGLYPAGDEWQLALSDGETGKNYLSDAFKFGGEQKLQLKETTAQPEGERANLRVITQNR QALSDITAILPDGNKVMMSSLRQFSGTQPLYTLDGDGTLTNNQSGVKYRPNNQIGFYQSI TADGNWGDEKLSPGYTVTTGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGM VLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPA WFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLP LLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGG GQDFGLAAAIATLIFLLVGALAIVNLKATRMKFD >gi|299856438|gb|ADWV01000013.1| GENE 18 20659 - 21849 1468 396 aa, chain - ## HITS:1 COG:ECs5017 KEGG:ns NR:ns ## COG: ECs5017 COG2182 # Protein_GI_number: 15834271 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 764 100.0 0 MKIKTGARILALSALTTMMFSASALAKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIK VTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTW DAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEP YFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAE AAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKE LAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIP QMSAFWYAVRTAVINAASGRQTVDEALKDAQTRITK >gi|299856438|gb|ADWV01000013.1| GENE 19 22214 - 23329 1222 371 aa, chain + ## HITS:1 COG:ECs5018 KEGG:ns NR:ns ## COG: ECs5018 COG3839 # Protein_GI_number: 15834272 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 371 1 371 371 729 100.0 0 MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDL FIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEV LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLH KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMN FLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPSDIADVIL EGEVQVVEQLGNETQIHIQIPSIRQNLVYRQNDVVLVEEGATFAIGLPPERCHLFREDGT ACRRLHKEPGV >gi|299856438|gb|ADWV01000013.1| GENE 20 23404 - 24741 1636 445 aa, chain + ## HITS:1 COG:ECs5019 KEGG:ns NR:ns ## COG: ECs5019 COG4580 # Protein_GI_number: 15834273 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli O157:H7 # 1 445 2 446 446 853 99.0 0 MITLRKLPLAVAVAAGVMSAQAMAVDFHGYARSGIGWTGSGGEQQCFQTTGAQSKYRLGN ECETYAELKLGQEVWKEGDKSFYFDTNVAYSVAQQNDWEATDPAFREANVQGKNLIEWLP GSTIWAGKRFYQRHDVHMIDFYYWDISGPGAGLENIDVGFGKLSLAATRSSEAGGSSSFA SNNIYDYTNETANDVFDVRLAQMEINPGGTLELGVDYGRANLRDNYRLVDGASKDGWLFT AEHTQSVLKGFNKFVVQYATDSMTSQGKGLSQGSGVAFDNEKFAYNINNNGHMLRILDHG AISMGDNWDMMYVGMYQDINWDNDNGTKWWTVGIRPMYKWTPIMSTVMEIGYDNVESQRT GDKNNQYKITLAQQWQAGDSIWSRPAIRVFATYAKWDEKWGYDYNGDSKVNPNYGKAVPA DFNGGSFGRGDSDEWTFGAQMEIWW >gi|299856438|gb|ADWV01000013.1| GENE 21 24984 - 25904 796 306 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_4571 NR:ns ## KEGG: ECUMN_4571 # Name: malM # Def: maltose regulon periplasmic protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 306 1 306 306 496 100.0 1e-139 MKMNKSLIALCLSAGLLASAPGISLADVNYVPQNTSDAPAIPSAALQQLTWTPVDQSKTQ TTQLATGGQQLNVPGISGPVAAYSVPANIGELTLTLTSEVNKQTSVFAPNVLILDQNMTP SAFFPSSYFTYQEPGVMSADRLEGVMRLTPALGQQKLYVLVFTTEKDLQQTTQLLDPAKA YAKGVGNSIPDIPDPVARHTTDGLLKLKVKTNSSSSVLVGPLFGSSAPAPVTVGNTAAPA VAAPAPAPVKKSEPMLNDTESYFNTAIKNAVAKGDVDKALKLLDEAERLGSTSARSTFIS SVKGKG >gi|299856438|gb|ADWV01000013.1| GENE 22 26175 - 26327 87 50 aa, chain + ## HITS:1 COG:ECs5021_1 KEGG:ns NR:ns ## COG: ECs5021_1 COG1357 # Protein_GI_number: 15834275 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Escherichia coli O157:H7 # 1 47 15 61 277 78 87.0 3e-15 MKHDVVQGNNIVDLDLLRNFNGVPGLNRDNFIYISNIFSNIKQRNEKIMQ >gi|299856438|gb|ADWV01000013.1| GENE 23 26976 - 27713 366 245 aa, chain + ## HITS:1 COG:yjbI_1 KEGG:ns NR:ns ## COG: yjbI_1 COG1357 # Protein_GI_number: 16131864 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Escherichia coli K12 # 1 51 198 248 248 99 98.0 4e-21 MIDTLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKTFSHCPYIKDPIIRSYIHSG EDNKFDDFMRQHRFSKVDFDTQQMIHFINRFNMNKGLIDKNNNFFIQLIDQALRSTDDMI KANAWYLYKEWIRSDDVSPIFIETEEKLRTFNTNKLTRNDNIFILFSSVDDGPVMVVSSQ RLHDMLNPTKDTNWNSTYIYKSRHEMLPVNLTQETLFSSKSHGKYALFPIFTASWRAHRI MNKGV >gi|299856438|gb|ADWV01000013.1| GENE 24 27936 - 28433 588 165 aa, chain + ## HITS:1 COG:ubiC KEGG:ns NR:ns ## COG: ubiC COG3161 # Protein_GI_number: 16131865 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate synthetase (chorismate lyase) # Organism: Escherichia coli K12 # 1 165 38 202 202 307 98.0 4e-84 MSHPALTQLRALRYFKEIPALEPQLLDWLLLEDSMTKRFEQQGKTVSVTMIREGFVEQNE IPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPVSTLSGPELALQKLGKTPLGRYLF TSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLPASPLY >gi|299856438|gb|ADWV01000013.1| GENE 25 28446 - 29318 1009 290 aa, chain + ## HITS:1 COG:ECs5023 KEGG:ns NR:ns ## COG: ECs5023 COG0382 # Protein_GI_number: 15834277 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 512 99.0 1e-145 MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVPQLWILAVFVAGVWLMR AAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTIL LSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSCWLMFLANILWA VAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYY WSIVVAGALFVYQQKLIANREREACFKAFMNNNYVGLVLFLGLAMSYWHF >gi|299856438|gb|ADWV01000013.1| GENE 26 29473 - 31956 2651 827 aa, chain - ## HITS:1 COG:plsB KEGG:ns NR:ns ## COG: plsB COG2937 # Protein_GI_number: 16131867 # Func_class: I Lipid transport and metabolism # Function: Glycerol-3-phosphate O-acyltransferase # Organism: Escherichia coli K12 # 1 827 1 827 827 1661 100.0 0 MTFCYPCRAFALLTRGFTSFMSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRP IMYVLPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEE SIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKL LASRAIAKAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQ GINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPA GPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTG TLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLR NLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAG AANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDSTVPSASASELIDHAL QMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMAAIVTQHRHISRDVLME HVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLA AGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLV LTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLTIESATQGEG >gi|299856438|gb|ADWV01000013.1| GENE 27 32067 - 32435 459 122 aa, chain + ## HITS:1 COG:ECs5025 KEGG:ns NR:ns ## COG: ECs5025 COG0818 # Protein_GI_number: 15834279 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Escherichia coli O157:H7 # 1 122 1 122 122 195 100.0 2e-50 MANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVVIACWLDVDAITRVLLI SSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAVLIAIIVAVITWCILLWSH FG >gi|299856438|gb|ADWV01000013.1| GENE 28 32545 - 33153 604 202 aa, chain + ## HITS:1 COG:ECs5026 KEGG:ns NR:ns ## COG: ECs5026 COG1974 # Protein_GI_number: 15834280 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 # 1 202 1 202 202 380 100.0 1e-106 MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS GASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSM KDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVD LRQQSFTIEGLAVGVIRNGDWL >gi|299856438|gb|ADWV01000013.1| GENE 29 33226 - 34551 1477 441 aa, chain + ## HITS:1 COG:dinF KEGG:ns NR:ns ## COG: dinF COG0534 # Protein_GI_number: 16131870 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 1 441 19 459 459 675 98.0 0 MAFLTSSDKALWHLALPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFM LLLFLRMSTTGLTAQAYGAKNPQALARALVQPLLLALGAGALIALLRTPIIDLALHIVGG SEAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPVILLVVGNILNIVLDVWLV MGLHMNVQGAALATVIAEYATLLIGLLMVRKILKLRGISGEMLKTAWRGNFRRLLALNRD IMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTLLTFTAYALDGFAYAVEAHSGQAYG ARDGSQLLDVWRAACRQSGIVALLFSVVYLLAGEHIIALLTSLTQIQELADRYLIWQVIL PLVGVWCYLLDGMFIGATRAAEMRNSMAVAAAGFALTLLTLPWLGNHGVWLALTVFLALR GLSLAAIWRRHWRNGTWFAAT >gi|299856438|gb|ADWV01000013.1| GENE 30 34667 - 34876 359 69 aa, chain + ## HITS:1 COG:ECs5028 KEGG:ns NR:ns ## COG: ECs5028 COG3237 # Protein_GI_number: 15834282 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 95 100.0 2e-20 MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQERYGYQKDQAEKEVVD WETRNEYRW >gi|299856438|gb|ADWV01000013.1| GENE 31 34918 - 35433 497 171 aa, chain - ## HITS:1 COG:zur KEGG:ns NR:ns ## COG: zur COG0735 # Protein_GI_number: 16131872 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Escherichia coli K12 # 1 171 21 191 191 325 100.0 3e-89 MEKTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISAYDLLDLLREAEPQAKP PTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQPTHTSAMFICDRCGAVKEECAEGVEDI MHTLAAKMGFALRHNVIEAHGLCAACVEVEACRHPEQCQHDHSVQVKKKPR >gi|299856438|gb|ADWV01000013.1| GENE 32 35751 - 36773 520 340 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_4600 NR:ns ## KEGG: EcE24377A_4600 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 340 1 340 340 617 100.0 1e-175 MLKIIPGATGYFNKTLNSNQFDNKDANKDKLDNIDATKDKLDNRGTIKGKLNNIYGKSID YSALRHRDIIIAKIDLFIQRITHNLWHARKKNVFLIEQITNLKVWVNKYIDDCTDEDLND RDFIASVVDRAIFHFAINSICNPGDNKDATPIERCTFDVETKNGLPSTVQLFYEESKDNE PLANIHFQAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYTDLAGAEKVNINEYN ENYLTAQFEELSQRDMKKYLGEMKHLADRGGMKFDDYLDKMSLLVNEGKLEPDILSKMRD AAPKLIDFAKSFDPNSKEKIKILTDTSNLIYDLFGVKSAK >gi|299856438|gb|ADWV01000013.1| GENE 33 37137 - 38174 1136 345 aa, chain + ## HITS:1 COG:ECs5031 KEGG:ns NR:ns ## COG: ECs5031 COG0042 # Protein_GI_number: 15834285 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Escherichia coli O157:H7 # 1 345 1 345 345 732 100.0 0 MHGNSEMQKINQTSAMPEKTDVHWSGRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVT TGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQ NGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGEC EMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQ HMDGVMVGREAYQNPGILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGHIT RHMLGLFQGIPGARQWRRYLSENAHKAGADINVLEHALKLVADKR >gi|299856438|gb|ADWV01000013.1| GENE 34 38308 - 38550 422 80 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_4470 NR:ns ## KEGG: ECIAI39_4470 # Name: pspG # Def: phage shock protein G # Organism: E.coli_IAI39 # Pathway: not_defined # 1 80 71 150 150 128 98.0 8e-29 MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALMIKLLPWLLLAIAVVWV IKAIKAPKVPKYQRYDRWRY >gi|299856438|gb|ADWV01000013.1| GENE 35 38716 - 39699 842 327 aa, chain - ## HITS:1 COG:ECs5033 KEGG:ns NR:ns ## COG: ECs5033 COG0604 # Protein_GI_number: 15834287 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 630 100.0 1e-180 MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSG LGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNINADKAAILPAAISFEQAAA SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS ALKAGAWQVINYREENLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGN SSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQ KYPLKDAQRAHEILESRATQGSSLLIP >gi|299856438|gb|ADWV01000013.1| GENE 36 39782 - 41197 1570 471 aa, chain + ## HITS:1 COG:dnaB KEGG:ns NR:ns ## COG: dnaB COG0305 # Protein_GI_number: 16131878 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Escherichia coli K12 # 1 471 1 471 471 892 100.0 0 MAGNKPFNKQQAEPRERDPQVAGLKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVADDF YTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANIS AYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDLAESRVFKIAESRANKDEGPK NIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTF AMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVDQTKIRTGQLDDEDWARISGT MGILLEKRNIYIDDSSGLTPTEVRSRARRIAREHGGIGLIMIDYLQLMRVPALSDNRTLE IAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYR DEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE >gi|299856438|gb|ADWV01000013.1| GENE 37 41250 - 42329 1027 359 aa, chain + ## HITS:1 COG:alr KEGG:ns NR:ns ## COG: alr COG0787 # Protein_GI_number: 16131879 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Escherichia coli K12 # 1 359 1 359 359 726 100.0 0 MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARL EEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVW MKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNT FCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGR VAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD >gi|299856438|gb|ADWV01000013.1| GENE 38 42582 - 43775 1198 397 aa, chain + ## HITS:1 COG:tyrB KEGG:ns NR:ns ## COG: tyrB COG1448 # Protein_GI_number: 16131880 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 397 1 397 397 801 99.0 0 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQP HGASLYLPMEGLNSYRHAIAPLLFGADHPVLQQQRVATIQTLGGSGALKVGADFLKRYFP ESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHP CCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPAL VSNSFSKIFSLYGERVGGLSVLCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLN DEALKASWLAEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVD RLREEFGVYLIASGRMCVAGLNTANVQRVAKAFAAVM >gi|299856438|gb|ADWV01000013.1| GENE 39 43997 - 44539 267 180 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4548 NR:ns ## KEGG: EC55989_4548 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 180 1 180 180 336 100.0 2e-91 MVTNFITPDGDDDMNISYVNSNKTTSLPVELDALNNKDISYAKDFSYAKDFFLYIETQLK IAKDFCRPGEEVSSSIASKVFHAFIDLVNKIRGKKDFMYICTLCCFAEEVKGDYSHYRTF LFDIGNQYKVKLTQSGKKELSLTLEFNDTIIESQKVTGNKAKHILEDIEKFYRNKPDTYY >gi|299856438|gb|ADWV01000013.1| GENE 40 44902 - 45615 588 237 aa, chain + ## HITS:1 COG:aphA KEGG:ns NR:ns ## COG: aphA COG3700 # Protein_GI_number: 16131881 # Func_class: R General function prediction only # Function: Acid phosphatase (class B) # Organism: Escherichia coli K12 # 1 237 1 237 237 471 99.0 1e-133 MRKITQAISAVCLLFALNSSAVALASSPSPLNPGTNVARLAEQAPIHWVSVAQIENSLAG RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVAR QLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPVTNMNPVIFAGDKPGQNTKSQW LQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTYKPLPQAGAFGEEVIVNSEY >gi|299856438|gb|ADWV01000013.1| GENE 41 45726 - 46142 395 138 aa, chain + ## HITS:1 COG:ECs5038 KEGG:ns NR:ns ## COG: ECs5038 COG0432 # Protein_GI_number: 15834292 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 138 1 138 138 277 100.0 3e-75 MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVR HDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLG EHRIHGGSRRIIATLQGE >gi|299856438|gb|ADWV01000013.1| GENE 42 46146 - 46502 484 118 aa, chain + ## HITS:1 COG:ECs5039 KEGG:ns NR:ns ## COG: ECs5039 COG2315 # Protein_GI_number: 15834293 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 118 1 118 118 216 100.0 5e-57 MTISELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVENRPAVSLKTSPELAELL RQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL >gi|299856438|gb|ADWV01000013.1| GENE 43 46537 - 49359 3176 940 aa, chain - ## HITS:1 COG:uvrA KEGG:ns NR:ns ## COG: uvrA COG0178 # Protein_GI_number: 16131884 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Escherichia coli K12 # 1 940 1 940 940 1900 100.0 0 MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML >gi|299856438|gb|ADWV01000013.1| GENE 44 49613 - 50149 758 178 aa, chain + ## HITS:1 COG:ECs5041 KEGG:ns NR:ns ## COG: ECs5041 COG0629 # Protein_GI_number: 15834295 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Escherichia coli O157:H7 # 1 178 1 178 178 270 100.0 1e-72 MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVL FGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQGGG APAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSAPAAPSNEPPMDFDDDIPF >gi|299856438|gb|ADWV01000013.1| GENE 45 50248 - 50529 265 93 aa, chain - ## HITS:1 COG:no KEGG:ECSE_4354 NR:ns ## KEGG: ECSE_4354 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 93 34 126 126 166 100.0 3e-40 MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISSGLGVVSACWFAMGLLG ITMADITAIWHNIESVMIEEMNQTPPQWPMILT >gi|299856438|gb|ADWV01000013.1| GENE 46 50959 - 52545 1145 528 aa, chain + ## HITS:1 COG:yjcC KEGG:ns NR:ns ## COG: yjcC COG4943 # Protein_GI_number: 16131887 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing sensor and EAL domains # Organism: Escherichia coli K12 # 1 528 1 528 528 1052 99.0 0 MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRTFAQLALDKSELVIRQA DLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDNHFLCSSLIAPVNGYTIAP ADYKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPLFWSEVMSDDPTLQWGVYDTV TKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVYSTKRPIAAIVATSYQRLITHFY NHLIFALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQPIIDIKTEKCI GAEALLRWLGEQGQIMNPAEFIPLAEKEGMIEQVTDYVIDNVFRDLGDYLATHADRYVSI NLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVDKMTPIILAFRQAGYEVA IDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAHSLGLKTIAEG VETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLPARELTRGQ >gi|299856438|gb|ADWV01000013.1| GENE 47 52548 - 52871 284 107 aa, chain - ## HITS:1 COG:ECs5044 KEGG:ns NR:ns ## COG: ECs5044 COG2207 # Protein_GI_number: 15834298 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 107 1 107 107 194 100.0 3e-50 MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLL LAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL >gi|299856438|gb|ADWV01000013.1| GENE 48 52957 - 53421 491 154 aa, chain + ## HITS:1 COG:ECs5045 KEGG:ns NR:ns ## COG: ECs5045 COG0789 # Protein_GI_number: 15834299 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 301 100.0 2e-82 MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAII KIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCI GCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN >gi|299856438|gb|ADWV01000013.1| GENE 49 53967 - 55316 1598 449 aa, chain + ## HITS:1 COG:ECs5046 KEGG:ns NR:ns ## COG: ECs5046 COG2252 # Protein_GI_number: 15834300 # Func_class: R General function prediction only # Function: Permeases # Organism: Escherichia coli O157:H7 # 1 449 1 449 449 689 99.0 0 MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAV FVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLGQHISVPVALGAVFLMGVL FTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIAANGVGLVIKNPLDGLPVALGDFA TFPVIMSLVGLAVIIGLEKLKVPGGILLTIIGISIVGLIFDPNVHFSGVFAMPSLSDENG NSLIGSLDIMGALNPVVMPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIIDGGKALT TDSMSSVFSGLVGAAPAAVYIESAAGTAAGGKTGLTAITVGVLFLLILFLSPLSYLVPGY ATAPALMYVGLLMLSNVAKIDFADFVDAMAGLVTAVFIVLTCNIVTGIMIGFATLVIGRL VSGEWRKLNIGTVVIAVALVTFYAGGWAI >gi|299856438|gb|ADWV01000013.1| GENE 50 55467 - 57116 1699 549 aa, chain + ## HITS:1 COG:ECs5047 KEGG:ns NR:ns ## COG: ECs5047 COG0025 # Protein_GI_number: 15834301 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Escherichia coli O157:H7 # 1 549 1 549 549 979 100.0 0 MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWPTFGLHVEFDPELFLVL FIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGFLIYWVVPGIPLIPAFALA AVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGLVSLKFAVAVAMGTMIFTVGG ATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIG VSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGILET SLMAAEIDPNVEIWMLFTDIILIYAALMLVRFGWLWTMKKFSNRFLKKKPMEFGSWTTRE ILIASFAGVRGAITLAGVLSIPLLLPDGNVFPARYELVFLAAGVILFSLFVGVVMLPILL QHIEVADHSQQLKEERIARAATAEVAIVAIQKMEERLAADTEENIDNQLLTEVSSRVIGN LRRRADGRNDVESSVQEENLERRFRLAALRSERAELYHLRATREISNETLQKLLHDLDLL EALLIEENQ >gi|299856438|gb|ADWV01000013.1| GENE 51 57270 - 58013 352 247 aa, chain - ## HITS:1 COG:yjcF KEGG:ns NR:ns ## COG: yjcF COG1357 # Protein_GI_number: 16131892 # Func_class: S Function unknown # Function: Uncharacterized low-complexity proteins # Organism: Escherichia coli K12 # 1 247 184 430 430 404 90.0 1e-113 MYKTNFYYAIMEKILFDDCILDDSNFAQIKMADGTLNACSAMHVQFYNAAMNRANIKNTF LDYSNFYMAYMAEVNLYKVIAPYVNLFKADLSFSKLDLINFEHADLSRVNLNKAILQNIN LIDSKLFCTWLTNTFLEMVICTDSNMANVNFNNANLSNCHFNCSILTKACMFNTRLYRVN FDEASVQGMGISILRGEENIPIDSDTLVTRQKFFEEDCTSHTGMSQTEDNINAVAMKITA DIMQHAD >gi|299856438|gb|ADWV01000013.1| GENE 52 58740 - 60389 2205 549 aa, chain - ## HITS:1 COG:yjcG KEGG:ns NR:ns ## COG: yjcG COG4147 # Protein_GI_number: 16131893 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Escherichia coli K12 # 1 549 1 549 549 960 99.0 0 MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVVFTLGITYWASKRVRSR SDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSLGFLVGWPIILFL IAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVALYLIAQMVGAGKLIELLFGLN YHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFSE AMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFY ATGFMGYFYILTFIIGFGAIMLVGANPEYKDAAGHLIGGNNMAAVHLANAVGGNLFLGFI SAVAFATILAVVAGLTLAGASAVSHDLYANVFKKGATEREELRVSKITVLILGVIAIILG VLFENQNIAFMVGLAFAIAASCNFPIILLSMYWSKLTTRGAMMGGWLGLITAVVLMILGP TIWVQILGHEKAIFPYEYPALFSISVAFLGIWFFSATDNSAEGARERELFRAQFIRSQTG FGVEQGRAH >gi|299856438|gb|ADWV01000013.1| GENE 53 60386 - 60700 349 104 aa, chain - ## HITS:1 COG:yjcH KEGG:ns NR:ns ## COG: yjcH COG3162 # Protein_GI_number: 16131894 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 104 1 104 104 199 100.0 1e-51 MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTS VTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS >gi|299856438|gb|ADWV01000013.1| GENE 54 60900 - 62858 2359 652 aa, chain - ## HITS:1 COG:acs KEGG:ns NR:ns ## COG: acs COG0365 # Protein_GI_number: 16131895 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Escherichia coli K12 # 1 652 1 652 652 1354 100.0 0 MSQIHKHTIPANIADRCLINPQQYEAMYQQSINVPDTFWGEQGKILDWIKPYQKVKNTSF APGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDASQSKHISYKELHRDVCRF ANTLLELGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSNS RLVITSDEGVRAGRSIPLKKNVDDALKNPNVTSVEHVVVLKRTGGKIDWQEGRDLWWHDL VEQASDQHQAEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAALTFKYVFDYHPGDI YWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMAQVVDKHQVNILYTAPTA IRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVVDTWWQTETGG FMITPLPGATELKAGSATRPFFGVQPALVDNEGNPLEGATEGSLVITDSWPGQARTLFGD HERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHP KIAEAAVVGIPHNIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTD SLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQAIAMPS >gi|299856438|gb|ADWV01000013.1| GENE 55 63250 - 64686 1610 478 aa, chain + ## HITS:1 COG:ECs5052 KEGG:ns NR:ns ## COG: ECs5052 COG3303 # Protein_GI_number: 15834306 # Func_class: P Inorganic ion transport and metabolism # Function: Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit # Organism: Escherichia coli O157:H7 # 1 478 1 478 478 972 100.0 0 MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPAKPVTVEAKNETFAPQHPDQYLSWKATS EQSERVDALAEDPRLVILWAGYPFSRDYNKPRGHAFAVTDVRETLRTGAPKNAEDGPLPM ACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGCADCHNTASPEFAKGKPELTL SRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYFDGKNKAVKFPWDDGMKVENMEQ YYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHGKNNVTCIDCHMPKVQNAEGKLYTD HKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQSINDLKIKVEDQLVHAHFEAKAALDA GATEAEMKPIQDDIRHAQWRWDLAIASHGIHMHAPEEGLRMLGTAMDKAADARTKLARLL ATKGITHEIQIPDISTKEKAQQAIGLNMEQIKAEKQDFIKTVIPQWEEQARKNGLLSQ >gi|299856438|gb|ADWV01000013.1| GENE 56 64731 - 65297 365 188 aa, chain + ## HITS:1 COG:no KEGG:G2583_4896 NR:ns ## KEGG: G2583_4896 # Name: nrfB # Def: NrfB, formate-dependent nitrite reductase # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 188 3 190 190 362 100.0 5e-99 MSVLRSLLTAGVLASGLLWSLNGITATPAAQASDDRYEVTQQRNPDAACLDCHKPDTEGM HGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPE QLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPAS VPLLKEQP >gi|299856438|gb|ADWV01000013.1| GENE 57 65294 - 65965 426 223 aa, chain + ## HITS:1 COG:ECs5054 KEGG:ns NR:ns ## COG: ECs5054 COG0437 # Protein_GI_number: 15834308 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 223 1 223 223 446 100.0 1e-125 MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVN KVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDV NPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNLQAGKLPACVEACPTKALTFG NLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ >gi|299856438|gb|ADWV01000013.1| GENE 58 65962 - 66918 1295 318 aa, chain + ## HITS:1 COG:nrfD KEGG:ns NR:ns ## COG: nrfD COG3301 # Protein_GI_number: 16131899 # Func_class: P Inorganic ion transport and metabolism # Function: Formate-dependent nitrite reductase, membrane component # Organism: Escherichia coli K12 # 1 318 1 318 318 525 100.0 1e-149 MTQTSAFHFESLVWDWPIAIYLFLIGISAGLVTLAVLLRRFYPQAGGADSTLLRTTLIVG PGAVILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQLYMVVLVLWLAKIFEHDL LALQQRWLPKLGIVQKVLSLLTPVHRGLETLMLVLAVLLGAYTGFLLSALKSYPFLNNPI LPVLFLFSGISSGAAVALIAMAIRQRSNPHSTEAQFVHRMEIPVVWGEIFLLVAFFVGLA LGDDGKVRALVAALGGGFWTWWFWLGVAGLGLIVPMLLKPWVNRSSGIPAVLAACGASLV GVLMLRFFILYAGQLTVA >gi|299856438|gb|ADWV01000013.1| GENE 59 67052 - 68656 1263 534 aa, chain + ## HITS:1 COG:nrfE KEGG:ns NR:ns ## COG: nrfE COG1138 # Protein_GI_number: 16131900 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Escherichia coli K12 # 1 534 19 552 552 889 98.0 0 MRLTCIGILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGS LLLWVLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAI EGRDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDGACARICWRWALPGW SALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQREIFRHWS LLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGWRARD GGPVVRFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPYFNRATL PFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGIVVSSVSRQEISLNLQPGQQVT LAGYTFRFERLDLQAKGNYTSEKAIVALFDHQQRIGELMPERRFYEARRQQMMEPSIRWN GIHDWYAVMGEKTGADRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWRGRKRDE >gi|299856438|gb|ADWV01000013.1| GENE 60 68649 - 69032 363 127 aa, chain + ## HITS:1 COG:nrfF KEGG:ns NR:ns ## COG: nrfF COG3088 # Protein_GI_number: 16131901 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in biosynthesis of c-type cytochromes # Organism: Escherichia coli K12 # 1 127 1 127 127 181 98.0 3e-46 MNKGLLTLLLLFTCFARAQVVDTWQFANPQQQQQALNIASQLRCPQCQNQNLLESNAPVA VSMRHQVYSMVAEGKNEVEIIGWMTERYGDCVRYNPPLTGQTLVLWALPVVLLLLMALIL WRVRAKR >gi|299856438|gb|ADWV01000013.1| GENE 61 69029 - 69625 661 198 aa, chain + ## HITS:1 COG:nrfG KEGG:ns NR:ns ## COG: nrfG COG4235 # Protein_GI_number: 16131902 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Escherichia coli K12 # 1 198 1 198 198 323 97.0 9e-89 MKEPKIPVKMLTTLTILMVFLCVGSYLLSPKWQAVHAEYQRQRDPLHQFASQQTPEAQLQ ALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQ ASQHMTALTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINR TQLVESINMAKLLQRRSD >gi|299856438|gb|ADWV01000013.1| GENE 62 69967 - 71280 1737 437 aa, chain + ## HITS:1 COG:ECs5059 KEGG:ns NR:ns ## COG: ECs5059 COG1301 # Protein_GI_number: 15834313 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Escherichia coli O157:H7 # 1 437 1 437 437 747 99.0 0 MKSIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPAGDIFIHLIKMIVVPIV ISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITLANVFQPGAGVDMSQLATV DISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEMLPIIFFSVLFGLGLSSLPAT HREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVTVANFGFSSLWPLAKLVLLVHFA ILFFALVVLGIVARLCGLSVWILIRILKDELILAYSTASSESVLPRIIEKMEAYGAPASI TSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIDLSIWQEIILVLTLMVTSKGIAGVPGV SFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVIAKWEHKFDRKKA LAYEREVLGKFDKTADQ >gi|299856438|gb|ADWV01000013.1| GENE 63 71358 - 72047 578 229 aa, chain - ## HITS:1 COG:ECs5060 KEGG:ns NR:ns ## COG: ECs5060 COG0790 # Protein_GI_number: 15834314 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 433 100.0 1e-121 MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQK AADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKP DYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGY SEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG >gi|299856438|gb|ADWV01000013.1| GENE 64 72141 - 73820 1898 559 aa, chain - ## HITS:1 COG:fdhF KEGG:ns NR:ns ## COG: fdhF COG0243 # Protein_GI_number: 16131905 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 559 157 715 715 1172 100.0 0 MSNAINEIDNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKIETARIADMHI ALKNGSNIALLNAMGHVIIEENLYDKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSAS EIRQAARMYAQAKSAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRGQN NVQGACDMGALPDTYPGYQYVKDPANREKFAKAWGVESLPAHTGYRISELPHRAAHGEVR AAYIMGEDPLQTDAELSAVRKAFEDLELVIVQDIFMTKTASAADVILPSTSWGEHEGVFT AADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHLCPDFYGAT YEKMGELGFIQWPCRDTSDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPIDKLTDEYPMV LSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTEDAKRLGIEDEALVWVHSRKGKII TRAQVSDRPNKGAIYMTYQWWIGACNELVTENLSPITKTPEYKYCAVRVEPIADQRAAEQ YVIDEYNKLKTRLREAALA >gi|299856438|gb|ADWV01000013.1| GENE 65 73869 - 74288 323 139 aa, chain - ## HITS:1 COG:ECs5061 KEGG:ns NR:ns ## COG: ECs5061 COG0243 # Protein_GI_number: 15834315 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 139 1 139 715 296 100.0 6e-81 MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLKGYYGWDFINDTQILTP RLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDAIQTTGSSRGTGNETNYVM QKFARAVIGTNNVDCCARV >gi|299856438|gb|ADWV01000013.1| GENE 66 74486 - 75952 1563 488 aa, chain - ## HITS:1 COG:ECs5062 KEGG:ns NR:ns ## COG: ECs5062 COG1538 # Protein_GI_number: 15834316 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 1 488 1 488 488 895 99.0 0 MINRQLSRLLLCSILGSTTLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQW WKQLNDPQLDALIQRTLSGSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVS ANGFLSPYAMDAPALGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNTALAETA AVELSLTTGVAQLYYSMQASYQMLDLLEQTRDVIDYAVKAHQSKVAHGLEAQVPFHGARA QILAVDKQIAAVKGQITETRESLRALIGAGASDMPEIKPVALPRVQTGIPATLSYELLAR RPDLQAMRWYVQASLDQVDSARALFYPSFDIKAFFGLDAIHLDTLFKKTSRQFNFIPGLK LPLFDGGRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVE ATRFTQRAAEAAYQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQ AAPVVEKK >gi|299856438|gb|ADWV01000013.1| GENE 67 75949 - 78000 1533 683 aa, chain - ## HITS:1 COG:yjcQ KEGG:ns NR:ns ## COG: yjcQ COG1289 # Protein_GI_number: 16131907 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 48 683 1 636 636 1221 98.0 0 MSALNSLPLPVVRLLAFFHEELSERRPGRVPQIVQLWVGCLLVILISMTFEIPFVALSLA VLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGEPLIRLIIAGPILMGCMFLM RTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCIVVGLYPTLLMTLIGVLWFPS RAITQMHQALNDRLDDAISHLTDSLAPLPETRIEREALALQKLNVFCLADDANWRTQSAW WQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKLASEINKLQHAVAEGQCWQSDWRIT ESEAMAARECNLENICQTLLQLGQMDPNTPPTPAAKPPSMVADAFTNPDYMRYAVKTLLA CLICYTFYSGVDWEGIHTCMLTCVIVANPNVGSSYQKMVLRFGGAFCGAILALLFTLLVM PWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATLENVFGPVYDLVEIR DRAMGIIIGTVVSAVIYTFVWPESEARTLPQKLAGTLGMLSKVMRIPRQQEVTALRTYLQ IRIGLHAAFNACEEMCQRVALERQLDSEERALLIERSQTVIRQGRDILHAWDATWNSAQA LDNALQPDRAAQFADALEKYAAGLATALSRSPQITLEETPASQAILPTLLKQEQHVCQLF ARLPDWTAPALTPATEQAQGATQ >gi|299856438|gb|ADWV01000013.1| GENE 68 78000 - 79031 1011 343 aa, chain - ## HITS:1 COG:yjcR KEGG:ns NR:ns ## COG: yjcR COG1566 # Protein_GI_number: 16131908 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli K12 # 1 343 1 343 343 583 99.0 1e-166 MESTPKKAPRSKFPALLVVALALVALVFVIWRVDSAPSTNDAYASADTIDVVPEVSGRIV ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS AVSGVDALVAQRAAVEADIALTKLHLEMATVRAPFDGRVISLKTSIGQFASAMRPIFTLI DTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGL PKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGASAVANLEPQ >gi|299856438|gb|ADWV01000013.1| GENE 69 79050 - 79325 192 91 aa, chain - ## HITS:1 COG:no KEGG:SSON_4264 NR:ns ## KEGG: SSON_4264 # Name: not_defined # Def: formate dehydrogenase H # Organism: S.sonnei # Pathway: not_defined # 1 91 17 107 107 140 100.0 2e-32 MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILMLITRRV IQRANINLAFVGIIYTALFALYAMLFWLAFF >gi|299856438|gb|ADWV01000013.1| GENE 70 79534 - 81519 2300 661 aa, chain - ## HITS:1 COG:yjcS KEGG:ns NR:ns ## COG: yjcS COG2015 # Protein_GI_number: 16131909 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alkyl sulfatase and related hydrolases # Organism: Escherichia coli K12 # 1 661 5 665 665 1290 96.0 0 MNNSRLFRLSRIVIALTAASGMMVNTAYATDEAKAATQYTQQVNQNYAKSLPFSDRQDFD DAQRGFIAPLLDEGILRDANGKPYYRGEDYKFDINAPAPETVNPSLWRQSQLNGISGLFK VTDRMYQVRGQDISNITFIEGDTGIIVIDPLVTPPSAKAALDLYFQNRPQKPIVAVIYTH SHTDHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSRRALYSYGLLLAH NPQGNIGNGLGVTLASGYPSIIAPNKTITKTGEKMIIDGLEFDFLMTPGSEAPAEMHFYI PALKALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHTWPVW GNKHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEIGDMIKLPPALANNWASRGYYGSVS HNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVINLAQEANKQGDYRWSA ELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRGFYLTGAKELREGVHKFSHGTTG SPDTIRGMSVEMLFDFMSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNYRKTLQS QADASFYISREDLHAVLTGQAKMADLVKAKKAKIIGNGAKLEEIIACLDNFDLWVNIVTP N >gi|299856438|gb|ADWV01000013.1| GENE 71 81772 - 82089 227 105 aa, chain + ## HITS:1 COG:rpiB KEGG:ns NR:ns ## COG: rpiB COG0698 # Protein_GI_number: 16131916 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Escherichia coli K12 # 38 105 29 149 149 105 53.0 2e-23 MQPVFLFKKRTGAMGGHVAGTAGFCVAVPAFYSWSMSEVIDKDTRSSERTDYPHYASEVA LAFGSRVVGLELAKMIVDAWLGAQYEGGRHQQRVEAITAIEQRRN >gi|299856438|gb|ADWV01000013.1| GENE 72 82158 - 82487 234 109 aa, chain + ## HITS:1 COG:no KEGG:B21_03923 NR:ns ## KEGG: B21_03923 # Name: yjdP # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 109 1 109 109 79 99.0 5e-14 MKRFPLFLLFTLLTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQREV SDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERRMEDEYGR >gi|299856438|gb|ADWV01000013.1| GENE 73 82634 - 83392 632 252 aa, chain - ## HITS:1 COG:ECs5075 KEGG:ns NR:ns ## COG: ECs5075 COG1235 # Protein_GI_number: 15834329 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 505 95.0 1e-143 MSLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGRHDL TDRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDVIPVYGPPDEQGCDDLFKHPGLLDFS HTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTAGLPEKTLKFLLNNH PQVMVIDCSHPPRADAPRNHYDLNTVLALNQVIRSPQVILTHISHQFDAWLMENALPSGF EVGFDGMEIGVA >gi|299856438|gb|ADWV01000013.1| GENE 74 83394 - 83828 557 144 aa, chain - ## HITS:1 COG:phnO KEGG:ns NR:ns ## COG: phnO COG0454 # Protein_GI_number: 16131919 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli K12 # 1 144 1 144 144 283 99.0 8e-77 MPACELRPATQYDTDAVYALICELKQAEFDHHAFRVGFNANLRDPNMRYHLALLDGEVVG MIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVK RHNAHRFYLREGYEQSHFRFTKAL >gi|299856438|gb|ADWV01000013.1| GENE 75 83815 - 84372 434 185 aa, chain - ## HITS:1 COG:phnN KEGG:ns NR:ns ## COG: phnN COG3709 # Protein_GI_number: 16131920 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized component of phosphonate metabolism # Organism: Escherichia coli K12 # 1 185 1 185 185 356 98.0 2e-98 MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASAGSENHIALSEREFFTR AGQNLLALSWHANGLYYGVGIEIDLWLHAGFDVVVNGSRAHLPQARARYQSALLPVCLQV SPEILRQRLENRGRENASEINARLARAARYTPQDCHTLNNDGSLRQSVDTLLTLIHQKEK HHACL >gi|299856438|gb|ADWV01000013.1| GENE 76 84372 - 85508 1143 378 aa, chain - ## HITS:1 COG:ECs5078 KEGG:ns NR:ns ## COG: ECs5078 COG3454 # Protein_GI_number: 15834332 # Func_class: P Inorganic ion transport and metabolism # Function: Metal-dependent hydrolase involved in phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 731 97.0 0 MIINNVKLVLENEVVHGSLEVQDGEIRAFAESQSRLPEAMDGEGGWLLPGLIELHTDNLD KFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINTIEE TQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLVSLMDHSPGQRQFANREKYRE YYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAALCRARQIALASHDDATHAHVAES HQLGSVIAEFPTTFEAAEASRKHGMNVLMGAPNIVRGGSHSGNVAASELAQLGLLDILSS DYYPASLLDAAFRVADDESNRFTLPQAVRLVTKNPAQALNLQDRGVIGEGKRADLVLAHR QGNHIHIDHVWRQGKRVF >gi|299856438|gb|ADWV01000013.1| GENE 77 85505 - 86185 223 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 219 1 209 245 90 29 4e-17 MINVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLP DEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGV PREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASL DAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASA >gi|299856438|gb|ADWV01000013.1| GENE 78 86296 - 87054 376 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 19 251 36 267 329 149 35 7e-35 MNKPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGKTTLLKSISARLTPQQG EIHYENRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSAGGNIGERLMATGARHYGD IRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNLVTHPKLVFMDEPTGGLDVSV QARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQGQVVESGLTDRVLDDPHHP YTQLLVSSVLQN >gi|299856438|gb|ADWV01000013.1| GENE 79 87051 - 87896 821 281 aa, chain - ## HITS:1 COG:ECs5081 KEGG:ns NR:ns ## COG: ECs5081 COG3627 # Protein_GI_number: 15834335 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 281 1 281 281 572 99.0 1e-163 MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVI GESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATLIQTRHRIPETPLTEDQI VIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGR YVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEP CAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKSQ >gi|299856438|gb|ADWV01000013.1| GENE 80 87889 - 88953 1207 354 aa, chain - ## HITS:1 COG:ECs5082 KEGG:ns NR:ns ## COG: ECs5082 COG3626 # Protein_GI_number: 15834336 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 354 1 354 354 671 98.0 0 MYVAVKGGEKAIDAAHALQESRRRGDTDLPELSVAQIEQQLNLAVDRVMTEGGIADRELA ALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTEMRLERRISAVYKDIPGGQLLGP TYDYTHRLLDFTLLANGEAPTLTTAHSEQQPSPHVFSLLARQGLAKFEEDSGAQPDDITR TPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRNPPFAGEIRSGYIDVSIVPEELG FAVNVGELLMTECEMVNGFIDPPGERPHFTRGYGLVFGMSERKAMAMALVDRALQAPEYG EHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVDFQAELELLKRLQQEQNHG >gi|299856438|gb|ADWV01000013.1| GENE 81 88953 - 89537 682 194 aa, chain - ## HITS:1 COG:ECs5083 KEGG:ns NR:ns ## COG: ECs5083 COG3625 # Protein_GI_number: 15834337 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 194 1 194 194 347 97.0 7e-96 MTLETAFILPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDT PVWLSAPLSNDIVSQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALSTGTAVAPEAG ATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILYELTERPHPFPLGIDLILTCGE RLLAIPRTTHVEVC >gi|299856438|gb|ADWV01000013.1| GENE 82 89534 - 89986 503 150 aa, chain - ## HITS:1 COG:ECs5084 KEGG:ns NR:ns ## COG: ECs5084 COG3624 # Protein_GI_number: 15834338 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized enzyme of phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 150 1 150 150 258 97.0 3e-69 MHADTATRQHWMSVLAHSQPAELAARLKALNITADYEVIRAAETGLVQIQARMGGTGERF FAGDATLTRAAVRLTDGTLGYSWVLGRDKQHAERCALIDALMQQSRYFQNLSETLIAPLD ADRMARIAARQAEVNASRVDFFTMVRGDNA >gi|299856438|gb|ADWV01000013.1| GENE 83 89987 - 90712 620 241 aa, chain - ## HITS:1 COG:phnF KEGG:ns NR:ns ## COG: phnF COG2188 # Protein_GI_number: 16131928 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 241 1 241 241 468 100.0 1e-132 MHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAARFEVNRHTLRRAIDQLV EKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPTSEKLLSVLRPASGHVADA LGITEGENVIHLRTLRRVNGVALCLIDHYFADLTLWPTLQRFDSGSLHDFLREQTGIALR RSQTRISARRAQAKECQRLEIPNMSPLLCVRTLNHRDGESSPAEYSVSLTRADMIEFTME H >gi|299856438|gb|ADWV01000013.1| GENE 84 90733 - 91512 955 259 aa, chain - ## HITS:1 COG:ECs5086 KEGG:ns NR:ns ## COG: ECs5086 COG3639 # Protein_GI_number: 15834340 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 259 18 276 276 464 99.0 1e-130 MQTITIAPPKRSWFSLLSWAVVLAVLVVSWQGAEMAPLTLIKDGGNMATFAADFFPPDFS QWQDYLTEMAVTLQIAVWGTALAVVLSIPFGLMSAENLVPWWVYQPVRRLMDACRAINEM VFAMLFVVAVGLGPFAGVLALFIHTTGVLSKLLSEAVEAIEPGPVEGIRATGANKLEEIL YGVLPQVMPLLISYSLYRFESNVRSATVVGMVGAGGIGVTLWEAIRGFQFQQTCALMVLI IVTVSLLDFLSQRLRKHFI >gi|299856438|gb|ADWV01000013.1| GENE 85 91618 - 92634 1043 338 aa, chain - ## HITS:1 COG:phnD KEGG:ns NR:ns ## COG: phnD COG3221 # Protein_GI_number: 16131931 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate/phosphonate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 338 1 338 338 642 100.0 0 MNAKIIASLAFTSMFSLSTLLSPAHAEEQEKALNFGIISTESQQNLKPQWTPFLQDMEKK LGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRANGQVFAQTVAADGSPGYW SVLIVNKDSPINNLNDLLAKRKDLTFGNGDPNSTSGFLVPGYYVFAKNNISASDFKRTVN AGHETNALAVANKQVDVATNNTENLDKLKTSAPEKLKELKVIWKSPLIPGDPIVWRKNLS ETTKDKIYDFFMNYGKTPEEKAVLERLGWAPFRASSDLQLVPIRQLALFKEMQGVKSNKG LNEQDKLAKTTEIQAQLDDLDRLNNALSAMSSVSKAVQ >gi|299856438|gb|ADWV01000013.1| GENE 86 92659 - 93447 261 262 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 231 1 214 305 105 31 1e-21 MQTIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSA GSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRT CFSWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPI ASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQF DNERFDHLYRSINRIEENAKAA >gi|299856438|gb|ADWV01000013.1| GENE 87 93580 - 94023 507 147 aa, chain - ## HITS:1 COG:phnB KEGG:ns NR:ns ## COG: phnB COG2764 # Protein_GI_number: 16131933 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 147 1 147 147 295 99.0 3e-80 MPLSPYLSFAGNCADAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIA HANVRIAGSDIMMSDAMPSGKASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETF WAHGFGKVTDKFGVPWMINVVKQQPTQ >gi|299856438|gb|ADWV01000013.1| GENE 88 94183 - 94518 453 111 aa, chain - ## HITS:1 COG:ECs5090 KEGG:ns NR:ns ## COG: ECs5090 COG2824 # Protein_GI_number: 15834344 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 216 100.0 8e-57 MSLPHCPKCNSEYTYEDNGMYICPECAYEWNDAEPAQESDELIVKDANGNLLADGDSVTI IKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN >gi|299856438|gb|ADWV01000013.1| GENE 89 94920 - 97148 1851 742 aa, chain + ## HITS:1 COG:yjdA_1 KEGG:ns NR:ns ## COG: yjdA_1 COG0699 # Protein_GI_number: 16131935 # Func_class: R General function prediction only # Function: Predicted GTPases (dynamin-related) # Organism: Escherichia coli K12 # 1 275 1 275 275 513 100.0 1e-145 MYTQTLYELSQEAERLLQLSRQQLQLLEKMPLSVPGDDAPQLALPWSQPNIAERHAMLNN ELRKISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVL HFSHVAPIDCLIQQLQQRLRDCDIKHLTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPI FHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYPGQLTLLDTPGP NEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFD QQDRNSDDADQVRALISGTLMKGCITPQQIFPVSSMWGYLANRARHELANNGKLPAPEQQ RWVEDFAHAALGRRWRHADLADLEHIRHAADQLWEDSLFAQPIQALLHAAYANASLYALR SAAHKLLNYAQQAREYLDFRAHGLNVACEQLRQNIHQVEESLQLLQLNQAQVSGEVKHEI ELALTSANHFLRQQQDALNAQLAALFQDDSEPLSEIRTCCETLLQTAQNTISRDFTLRFA ELESTLCRELTDVIRPIEQQVKMELSESGFRPGFHFPVFHGVVPHFNTRQLFSEVISRQE ATDEQSTRLGVVRETFSRWLNQPDWGRGNEKSPTETVDYSVLQRALSAEVDLYCQQMAKV LAEQVDESVTAGMNTFFAEFASCLTELQTRLRESLALRQQNESVVRLMQQQLQQTVMTHG WIYTDAQLLRDDIQTLFTAERY >gi|299856438|gb|ADWV01000013.1| GENE 90 97145 - 98023 543 292 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4600 NR:ns ## KEGG: EC55989_4600 # Name: yjcZ # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 292 1 292 292 561 100.0 1e-158 MTKTLLDGPGRVLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLARVQLQTWTNG GMLNAPLSLRLTLVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALY EWFSARCRWKEKALTQRGLLVQAGEQSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAF GDACRLGSPQAVALLLGDLRVKATQHLAESINAAPTTRHYYHQWFASSTVPTGGDHADFL SWLGKWTTADKQPVCWSVTQRWQTVALGMPRLCSAQRLAGAMVEEIFSVNLA >gi|299856438|gb|ADWV01000013.1| GENE 91 98287 - 99789 1676 500 aa, chain + ## HITS:1 COG:ECs5093 KEGG:ns NR:ns ## COG: ECs5093 COG0477 # Protein_GI_number: 15834347 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 500 1 500 500 973 99.0 0 MLKRKKVKPITLRDVTIIDDGKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGAD PSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYD TIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGA GVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDRE GLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLI IIAIMIGMLFVQPVMGLLSDRFGRRPFVLLGSVALFVLAIPAFILINSNVIGLIFAGLLM LAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESSQNLMMP AYYLMVVAVIGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHYDNIEQKIDNIDHE IADLQAKRTRLVQQHPRIDE >gi|299856438|gb|ADWV01000013.1| GENE 92 99901 - 99990 109 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKNRVYESLTTVFSVLVVSSFLYIWFATF >gi|299856438|gb|ADWV01000013.1| GENE 93 99966 - 101057 889 363 aa, chain - ## HITS:1 COG:ECs5094 KEGG:ns NR:ns ## COG: ECs5094 COG0642 # Protein_GI_number: 15834348 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 363 1 363 363 677 99.0 0 MHFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQIQLFEQALRDNRNNDRHIMR EIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQKELEARTADNLTPIAIHSATL EIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTPLAGVRLHLELLAKTHHIDVAPLV ARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLEDVILPSYDELSTMLDQRQQTLLLPE SAADITVQGDATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDGGAVMAVEDEGPGIDESK CGELSKAFVRMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQETSGTRAWVRLKKDQNVA NQI >gi|299856438|gb|ADWV01000013.1| GENE 94 101067 - 101735 896 222 aa, chain - ## HITS:1 COG:ECs5095 KEGG:ns NR:ns ## COG: ECs5095 COG0745 # Protein_GI_number: 15834349 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 432 100.0 1e-121 MKILIVEDDTLLLQGLILAAQTEGYACDGVTTARMAEQSLEAGHYSLVVLDLGLPDEDGL HFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLVKPFALEELHARIRALLRRHN NQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALLSRLMLKAGSPVHREILYNDIYN WDNEPSTNTLEVHIHNLRDKVGKARIRTVRGFGYMLVANEEN >gi|299856438|gb|ADWV01000013.1| GENE 95 101732 - 103375 1450 547 aa, chain - ## HITS:1 COG:ZyjdB KEGG:ns NR:ns ## COG: ZyjdB COG2194 # Protein_GI_number: 15804706 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli O157:H7 EDL933 # 1 547 11 557 557 1080 99.0 0 MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDSLHNVLVFLSMPVVAFS VINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDRSMIANIIDTTPAESYALM TPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGANILVSVLLILLVAALFYKDYA SLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVRIGEDAHRNPLMQNEKRKNLTIL IVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTASCGTATAVSVPCMFSDMPREHYKE ELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACDRVPHQNVTALNLPGQCINGECYDEVL FHGLEEYINNLQGDGVIVLHTIGSHGPTYYNRYPPQFRKFTPTCDTNEIQTCSKEQLVNT YDNTLVYVDYIVDKAINLLKEHQDKFTTSLVYLSDHGESLGENGIYLHGLPYAIAPDSQK QVPMLLWLSEDYQKRYQVDQNCLQKQAQTQHYSQDNLFSTLLGLTGVETKYYQAADDILQ TCRRVSE >gi|299856438|gb|ADWV01000013.1| GENE 96 103479 - 104816 1435 445 aa, chain - ## HITS:1 COG:ECs5097 KEGG:ns NR:ns ## COG: ECs5097 COG0531 # Protein_GI_number: 15834351 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 445 1 445 445 780 100.0 0 MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVY AKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILK DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA AWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYV LSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQT AKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIF TLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVI TAMYALNYNRLHKNPYPLDAPISKD >gi|299856438|gb|ADWV01000013.1| GENE 97 104953 - 105714 417 253 aa, chain - ## HITS:1 COG:ECs5098 KEGG:ns NR:ns ## COG: ECs5098 COG2207 # Protein_GI_number: 15834352 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 493 100.0 1e-139 MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISH DIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRA LLFTVLSRFLDSKKFLSLMMYMLRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLK KKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTP LHYVSQHRERTVA >gi|299856438|gb|ADWV01000013.1| GENE 98 106039 - 108306 2098 755 aa, chain - ## HITS:1 COG:adiA KEGG:ns NR:ns ## COG: adiA COG1982 # Protein_GI_number: 16131943 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli K12 # 1 755 2 756 756 1601 99.0 0 MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFS YQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMDRDLLELVDEFAWILEDTA DFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYHDY YGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQA CMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKIS ESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY ADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHAT TSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWN KEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILA PGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCS FKRHYDANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPM AEITPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSY LRSLQSWDHHFPGFEHETEGTEIIDGIYHVMCVKA >gi|299856438|gb|ADWV01000013.1| GENE 99 108505 - 109413 836 302 aa, chain - ## HITS:1 COG:melR KEGG:ns NR:ns ## COG: melR COG2207 # Protein_GI_number: 16131944 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 302 1 302 302 610 100.0 1e-174 MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYL INNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGM VIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRT HKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYI TAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF PG >gi|299856438|gb|ADWV01000013.1| GENE 100 109699 - 111051 1304 450 aa, chain + ## HITS:1 COG:melA KEGG:ns NR:ns ## COG: melA COG1486 # Protein_GI_number: 16131945 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli K12 # 1 450 2 451 451 954 99.0 0 MTAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPTRLEESHIVVRKLMDSAG ASGKITCHTQQKEALEDADFVVVAFQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIM RALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAE ELARDLNIDPATLRYRCAGINHMAFYLELERKTADGSYVNLYPELLAAYEAGQAPKPNIH GNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGREDLIERYKVPLDEYPKRCVE QLANWHKELEEYKNASRIDIKPSREYASTIMNAIWTGEPSVIYGNVRNDGLIDNLPQGCC VEVACLVDANGIQPTKVGTLPSHLAALMQTNINVQTLLTEAILTENRDRVYHAAMMDPHT AAVLGIDEIYALVDDLIAAHGDWLPGWLHR >gi|299856438|gb|ADWV01000013.1| GENE 101 111166 - 112575 1014 469 aa, chain + ## HITS:1 COG:ECs5102 KEGG:ns NR:ns ## COG: ECs5102 COG2211 # Protein_GI_number: 15834356 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli O157:H7 # 1 469 1 469 469 856 99.0 0 MTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGW IVNATRSRWGKFKPWILIGTLANSVILFLLFSAHLFEGTTQIVFVCVTYILWGMTYTIMD IPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVNYVGGGDRGFGFQMFTL VLIAFFIVSTIITLRNVHEVFSSDNQPSAEGSHLTLKAIVALIYKNDQLSCLLGMALAYN VASNIITGFAIYYFSYVIGDADLFPYYLSYAGAANLVTLVFFPRLVKSLSRRILWAGASI LPVLSCGVLLLMALMSYHNVVLIVIAGILLNVGTALFWVLQVIMVADTVDYGEYKLHVRC ESIAYSVQTMVVKGGSAFAAFFIAVVLGMIGYVPNVEQSTQALLGMQFIMIALPTLFFMV TLILYFRFYRLNGDTLRRIQIHLLDKYRKVPPEPVHADIPVGAVSDVKA >gi|299856438|gb|ADWV01000013.1| GENE 102 112714 - 113343 656 209 aa, chain - ## HITS:1 COG:ECs5103 KEGG:ns NR:ns ## COG: ECs5103 COG3647 # Protein_GI_number: 15834357 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 209 1 209 209 395 99.0 1e-110 MTRTLKPLILNTGALALTLILIYTGISAHDKLTWLMEVTPVIIVVPLLLATAKRYPLTPL LYTLIFFHAIILMVGGQYTYAKVPVGFEVQEWLGLSRNPYDKLGHFFQGLVPALVAREIL VRGMYVRGRKMVAFLVCCVALAISAMYELIEWWAALAMGQGADDFLGTQGDQWDTQSDMF CALLGALTTVIFLARFHCRQLRRFGLITG >gi|299856438|gb|ADWV01000013.1| GENE 103 113466 - 115112 508 548 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 69 531 31 482 508 200 32 3e-50 MSNKPFIYQAPFPMGKDNTEYYLLTSDYVSVADFDGETILKVEPEALTLLAQQAFHDASF MLRPAHQKQVAAILHDPEASENDKYVALQFLRNSEIAAKGVLPTCQDTGTAIIVGKKGQR VWTGGGDEEALSKGVYNTYIEDNLRYSQNAALDMYKEVNTGTNLPAQIDLYAVDGDEYKF LCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRTLGTAACPPYHIAFVIGGTSAET NLKTVKLASVHYYDELPTEGNEHGQAFRDVQLEQELLEEAQKLGLGAQFGGKYFAHDIRV IRLPRHGASCPVGMGVSCSADRNIKAKINREGIWIEKLEHNPGQYIPQELRQAGEGEAVK VDLNRPMKEILAQLSQYPVSTRLSLTGTIIVGRDIAHAKLKELIDAGKELPQYIKDHPIY YAGPAKTPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAKGNRSQQVTDACHKHGGF YLGSIGGPAAVLAQQSIKHLECVAYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIVN KQCANCTK >gi|299856438|gb|ADWV01000013.1| GENE 104 115190 - 116530 1571 446 aa, chain - ## HITS:1 COG:ECs5105 KEGG:ns NR:ns ## COG: ECs5105 COG2704 # Protein_GI_number: 15834359 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 1 446 1 446 446 743 100.0 0 MLFTIQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQPGKPPVDVMLVIIAVVA ASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTILCGTGHVVYTILPIIYDV AIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLGNVTFDGRHLEFLDLLAITIP STLIGILAIGIFSWFRGKDLDKDEEFQKFISVPENREYVYGDTATLLDKKLPKSNWLAMW IFLGAIAVVALLGADSDLRPSFGGKPLSMVLVIQMFMLLTGALIIILTKTNPASISKNEV FRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLGEMVKEYPWAYAIVLLLVSKFVNSQAA ALAAIVPVALAIGVDPAYIVASAPACYGYYILPTYPSDLAAIQFDRSGTTHIGRFVINHS FILPGLIGVSVSCVFGWIFAAMYGFL >gi|299856438|gb|ADWV01000013.1| GENE 105 117101 - 117820 278 239 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 2 225 1 222 226 111 36 2e-23 MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQ KENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGW RQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTLRTLCQWIDAHQDYEFS TDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ >gi|299856438|gb|ADWV01000013.1| GENE 106 117817 - 119448 1418 543 aa, chain - ## HITS:1 COG:ECs5107 KEGG:ns NR:ns ## COG: ECs5107 COG3290 # Protein_GI_number: 15834361 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Escherichia coli O157:H7 # 1 543 1 543 543 1070 99.0 0 MRHSLPYRMLRKRPMKLSTTVILMVSAVLFSVLLVVHLIYFSQISDMTRDGLANKALAVA RTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTDMQSLRYSHPEAQRIGQPF KGDDILKALNGKENVAINRGFLAQALRVFTPIYDENHKQIGVVAIGLELSRVTQQINDSR WSIIWSVLFGMLVGLIGTCILVKVLKKILFGLEPYEISTLFEQRQAMLQSIKEGVVAVDD RGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVDVSEVLRDGTPRRDEEITIKDRL LLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRLDGLVNYADALRERSHEFMNKLHVILG LLHLKSYKQLEDYILKTANNYQEEIGSLLGKIKSPVIAGFLISKINRATDLGHTLILNSE SQLPDSGSEDQVATLITTLGNLIENALEALGPEPGGEISVTLHYRHGWLHCEVNDDGPGI APDKIDHIFDKGVSTKGSERGVGLALVKQQVENLGGSIAVESEPGIFTQFFVQIPWDGER SNR >gi|299856438|gb|ADWV01000013.1| GENE 107 119440 - 119574 84 44 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_4593 NR:ns ## KEGG: EcSMS35_4593 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 44 1 44 44 79 100.0 3e-14 MSHQLPCVTNFLSIISDEAGNSKGVRMIGYIGEETLATETASAV >gi|299856438|gb|ADWV01000013.1| GENE 108 119629 - 119859 236 76 aa, chain + ## HITS:1 COG:ECs5108 KEGG:ns NR:ns ## COG: ECs5108 COG3592 # Protein_GI_number: 15834362 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 76 1 76 76 158 97.0 2e-39 MDQALLDEGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLKRKPWIMPDEVDVVTVV KVIDTCPSGALKYRHK >gi|299856438|gb|ADWV01000013.1| GENE 109 119871 - 120143 363 90 aa, chain + ## HITS:1 COG:ECs5109 KEGG:ns NR:ns ## COG: ECs5109 COG2388 # Protein_GI_number: 15834363 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 162 98.0 2e-40 MEIREGHNKFYINDEQGKQIAEIVFVPTGENLAIIEHTDVDESLKGQGIGKQLVAKVVEK MRREKRKIIPLCPFSKHEFDKTREYDDIRS >gi|299856438|gb|ADWV01000013.1| GENE 110 120073 - 120264 131 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|293407852|ref|ZP_06651692.1| ## NR: gi|293407852|ref|ZP_06651692.1| predicted protein [Escherichia coli B354] # 1 63 1 63 63 110 90.0 3e-23 MTWDKKTLSLPILCASPYPSDALLHHSAESMKNIVTLYSPINCEYHHTPAFYQIRVSKMG IVG >gi|299856438|gb|ADWV01000013.1| GENE 111 120370 - 120666 252 98 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_4661 NR:ns ## KEGG: ECUMN_4661 # Name: yjdK # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 98 1 98 98 172 100.0 3e-42 MEGKNKFNTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTS LAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK >gi|299856438|gb|ADWV01000013.1| GENE 112 120694 - 120867 184 57 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_5644 NR:ns ## KEGG: ECH74115_5644 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 57 1 57 57 68 100.0 6e-11 MALFSKILIFYVIGVNISFVIIWFISHEKTHIRLLSAFLVGITWPMSLPVALLFSLF >gi|299856438|gb|ADWV01000013.1| GENE 113 120986 - 122503 1613 505 aa, chain - ## HITS:1 COG:ECs5111 KEGG:ns NR:ns ## COG: ECs5111 COG1190 # Protein_GI_number: 15834365 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Escherichia coli O157:H7 # 1 505 1 505 505 1000 100.0 0 MSEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSDQLHEEFDAKDNQE LESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGD IIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKS RQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRT LAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGI TVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG REIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGID RMIMLFTNSHTIRDVILFPAMRPQK >gi|299856438|gb|ADWV01000013.1| GENE 114 122740 - 124197 1318 485 aa, chain - ## HITS:1 COG:yjdL KEGG:ns NR:ns ## COG: yjdL COG3104 # Protein_GI_number: 16131956 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli K12 # 1 485 1 485 485 889 100.0 0 MKTPSQPRAIYYIVAIQIWEYFSFYGMRALLILYLTHQLGFDDNHAISLFSAYASLVYVT PILGGWLADRLLGNRTAVIAGALLMTLGHVVLGIDTNSTFSLYLALAIIICGYGLFKSNI SCLLGELYDENDHRRDGGFSLLYAAGNIGSIAAPIACGLAAQWYGWHVGFALAGGGMFIG LLIFLSGHRHFQSTRSMDKKALTSVKFALPVWSWLVVMLCLAPVFFTLLLENDWSGYLLA IVCLIAAQIIARMMIKFPEHRRALWQIVLLMFVGTLFWVLAQQGGSTISLFIDRFVNRQA FNIEVPTALFQSVNAIAVMLAGVVLAWLASPESRGNSTLRVWLKFAFGLLLMACGFMLLA FDARHAAADGQASMGVMISGLALMGFAELFIDPVAIAQITRLKMSGVLTGIYMLATGAVA NWLAGVVAQQTTESQISGMAIAAYQRFFSQMGEWTLACVAIIVVLAFATRFLFSTPTNMI QESND >gi|299856438|gb|ADWV01000013.1| GENE 115 124256 - 126403 2478 715 aa, chain - ## HITS:1 COG:ECs5113 KEGG:ns NR:ns ## COG: ECs5113 COG1982 # Protein_GI_number: 15834367 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 715 1 715 715 1494 100.0 0 MNVIAILNHMGVYFKEEPIRELHRALERLNFQIVYPNDRDDLLKLIENNARLCGVIFDWD KYNLELCEEISKMNENLPLYAFANTYSTLDVSLNDLRLQISFFEYALGAAEDIANKIKQT TDEYINTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDI SISVSELGSLLDHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILI DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVH AVITNSTYDGLLYNTDFIKKTLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIY ETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNA GKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNID NEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIG IDKTKALSLLRALTDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQELAQNIHKLIVHH NLPDLMYRAFEVLPTMVMTPYAAFQKELHGMTEEVYLDEMVGRINANMILPYPPGVPLVM PGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKEESKK >gi|299856438|gb|ADWV01000013.1| GENE 116 126483 - 127817 1524 444 aa, chain - ## HITS:1 COG:ECs5114 KEGG:ns NR:ns ## COG: ECs5114 COG0531 # Protein_GI_number: 15834368 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 444 1 444 444 761 100.0 0 MSSAKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWIISIIGAMSLAYVYARL ATKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNDPVP AGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVVMTAIVGWHWFDAATYAANWNT ADTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIVYIAATQ VLSGMYPSSVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRA ANDGNFPKVYGEVDSNGIPKKGLLLAAVKMTALMILITLMNSAGGKASDLFGELTGIAVL LTMLPYFYSCVDLIRFEGVNIRNFVSLICSVLGCVFCFIALMGASSFELAGTFIVSLIIL MFYARKMHERQSHSMDNHTASNAH >gi|299856438|gb|ADWV01000013.1| GENE 117 128183 - 129238 662 351 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4885 NR:ns ## KEGG: ECO103_4885 # Name: cadC # Def: DNA-binding transcriptional activator CadC # Organism: E.coli_O103_H2 # Pathway: not_defined # 5 351 166 512 512 688 99.0 0 MVFFLLSLGICVALVAFSTLDTRLPMSKSRILLNPRDIDINMVNKSCNSWSSPYQLSYAI GVGDLVATSLNTFSTFMVHDKINYNIDEPSSSGKTLSIAFVNQRQYRAQQCFMSIKLVDN ADGSTMLDKRYVITNGNQLAIQNDLLESLSKALNQPWPQRMQETLQQILPHRGALLTNFY QAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALN TEIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEISWLNYVLLGKVYE MKGMNREAADAYLTAFNLRPGANTLYWIENGIFQTSVPYVVPYLDKFLASE >gi|299856438|gb|ADWV01000013.1| GENE 118 129214 - 129375 59 53 aa, chain - ## HITS:1 COG:cadC_1 KEGG:ns NR:ns ## COG: cadC_1 COG3710 # Protein_GI_number: 16131959 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Escherichia coli K12 # 1 40 116 155 180 75 97.0 3e-14 MLSSPPPIPEAVPATDSPSHSLNIQNTATPPEQSPIKSKRFTTFWVWFFSCCR >gi|299856438|gb|ADWV01000013.1| GENE 119 130007 - 130225 63 72 aa, chain + ## HITS:1 COG:no KEGG:EC55989_4627 NR:ns ## KEGG: EC55989_4627 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 72 1 72 72 142 100.0 4e-33 MSKRTDTFLFVLIQKISSVGVQTGVVLYGCVTLLMTSFDVQQHHGAARHFTSVSAIAQEQ IFPNWDMPANCW >gi|299856438|gb|ADWV01000013.1| GENE 120 130469 - 131311 384 280 aa, chain - ## HITS:1 COG:no KEGG:G2583_3676 NR:ns ## KEGG: G2583_3676 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 280 1 280 280 575 99.0 1e-163 MSDITISRPEVVTGHTDVICSTSIRHILAVRKSTLLQIDTLIRQLAEISAMTESIGGKAA PDWAMKQDFRCGCWLMEKPETAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSL EYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLSWNYKTNCPCKFGSKIIVNNL MRWDRWGFHLITGQQTDRLVDLERMLHLFSGKPIPDNRENITIRLDGHIQSVQGKERYED EMFIIKYFKKGSAHITFKRLELIDRINDIIARYFPSVLSA >gi|299856438|gb|ADWV01000013.1| GENE 121 131396 - 131593 92 65 aa, chain - ## HITS:1 COG:no KEGG:ECP_3018 NR:ns ## KEGG: ECP_3018 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 65 16 80 80 120 100.0 1e-26 MKSLITETALDILIAWLQDNIDCESGIIFDNDEDKTDSAALLPCIEQAREDVRTLRHLQL LHQNR >gi|299856438|gb|ADWV01000013.1| GENE 122 131605 - 132093 210 162 aa, chain - ## HITS:1 COG:no KEGG:ECP_3017 NR:ns ## KEGG: ECP_3017 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 162 1 162 162 325 99.0 3e-88 MKLALTLEADSVNVQALNMGRIVVDVDGVNLTELINKVAENGYSLRVVDDSDQQSTCTPP PLTTLTGIRCSTAHITEIDNAWLYSLSHQTSDFGESEWIHFTGSGYLLRTDAWSYPVLRL KRLGLSKMFRRLVVTLIRRYGVSLIHLDASAECLPGLPTFNW >gi|299856438|gb|ADWV01000013.1| GENE 123 132090 - 132467 250 125 aa, chain - ## HITS:1 COG:no KEGG:ECP_3016 NR:ns ## KEGG: ECP_3016 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 125 1 125 125 250 100.0 1e-65 MNTLPDTHVREASRCPSPVTIWQTLLTRLLDQHYGLTLNDTPFADERVIEQHIEAGISLC DAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRMVNNITQGKH PEAQQ >gi|299856438|gb|ADWV01000013.1| GENE 124 132557 - 132985 204 142 aa, chain - ## HITS:1 COG:no KEGG:ECP_3015 NR:ns ## KEGG: ECP_3015 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 142 1 142 142 296 100.0 1e-79 MSRIIAATGPFLTDFCEDFIVSDTLPGTTHPDDNHDRLWWGLPCTVTPCFGARLVQKGNR LHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCE ADTLGSCGYVYLAVYPTPETKT >gi|299856438|gb|ADWV01000013.1| GENE 125 132999 - 133220 323 73 aa, chain - ## HITS:1 COG:no KEGG:ECP_3014 NR:ns ## KEGG: ECP_3014 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 73 1 73 73 148 100.0 7e-35 MKIITRGEAMRIHRQHPASRLFPFCTGKYRWHGSAETYTGREVQDIPGVLAVFAERRKDS FGPYVRLMSVTLN >gi|299856438|gb|ADWV01000013.1| GENE 126 133289 - 133765 441 158 aa, chain - ## HITS:1 COG:ECs1403 KEGG:ns NR:ns ## COG: ECs1403 COG2003 # Protein_GI_number: 15830657 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 296 98.0 1e-80 MQQLSFLPGEMTPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFR VLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKAD RLITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL >gi|299856438|gb|ADWV01000013.1| GENE 127 133781 - 134266 547 161 aa, chain - ## HITS:1 COG:no KEGG:ECO111_0312 NR:ns ## KEGG: ECO111_0312 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 161 1 161 161 319 94.0 2e-86 MTTVLHNSTTPSVSVTAVSENNPPQLVATLVPDEQRISFWPQHFGLIPQWVTLEPRVFGW MDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAAC LMTYSHHACRTENYAMTVHYYRLRDYALQHPECSAIMRIID >gi|299856438|gb|ADWV01000013.1| GENE 128 134357 - 134743 370 128 aa, chain - ## HITS:1 COG:no KEGG:ECO26_3416 NR:ns ## KEGG: ECO26_3416 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 128 145 272 272 248 96.0 5e-65 MEKVIEGAYEVVGVFDRIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADIL TPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGKRIHTRAIHSIDTDIKLNRALWVMA ETLLKSMR Prediction of potential genes in microbial genomes Time: Sun May 15 15:33:32 2011 Seq name: gi|299856437|gb|ADWV01000014.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont13.1, whole genome shotgun sequence Length of sequence - 126342 bp Number of predicted genes - 105, with homology - 105 Number of transcription units - 49, operones - 23 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 80 - 110 3.0 1 1 Tu 1 . - CDS 239 - 2245 1385 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 2270 - 2329 3.7 + Prom 2309 - 2368 3.5 2 2 Tu 1 . + CDS 2404 - 3624 1337 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase + Term 3732 - 3761 2.1 + Prom 3739 - 3798 4.4 3 3 Tu 1 . + CDS 3917 - 5095 1074 ## COG0477 Permeases of the major facilitator superfamily + Term 5143 - 5173 1.8 4 4 Tu 1 . - CDS 5092 - 6087 880 ## ECO103_2785 flagella biosynthesis regulator - Prom 6110 - 6169 3.4 5 5 Op 1 5/0.294 + CDS 6186 - 7322 1154 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Term 7335 - 7375 5.1 6 5 Op 2 5/0.294 + CDS 7388 - 8401 1280 ## COG0136 Aspartate-semialdehyde dehydrogenase 7 5 Op 3 5/0.294 + CDS 8401 - 9213 597 ## COG0101 Pseudouridylate synthase 8 5 Op 4 5/0.294 + CDS 9296 - 9955 564 ## COG0586 Uncharacterized membrane-associated protein + Prom 9958 - 10017 4.7 9 6 Op 1 15/0.000 + CDS 10111 - 11025 1040 ## COG0777 Acetyl-CoA carboxylase beta subunit + Term 11030 - 11075 10.6 10 6 Op 2 7/0.118 + CDS 11095 - 12363 1304 ## COG0285 Folylpolyglutamate synthase 11 6 Op 3 7/0.118 + CDS 12353 - 13015 687 ## COG3147 Uncharacterized protein conserved in bacteria + Term 13144 - 13185 6.4 + Prom 13179 - 13238 4.8 12 7 Op 1 18/0.000 + CDS 13274 - 13762 414 ## COG1286 Uncharacterized membrane protein, required for colicin V production 13 7 Op 2 5/0.294 + CDS 13799 - 15316 1641 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 14 7 Op 3 5/0.294 + CDS 15411 - 15980 521 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase + Term 15989 - 16019 3.6 + Prom 15987 - 16046 2.4 15 8 Tu 1 9/0.059 + CDS 16246 - 17028 1020 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 17146 - 17189 0.2 + Prom 17079 - 17138 4.3 16 9 Op 1 12/0.000 + CDS 17249 - 18031 949 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 17 9 Op 2 12/0.000 + CDS 18121 - 18807 727 ## COG4215 ABC-type arginine transport system, permease component 18 9 Op 3 6/0.235 + CDS 18804 - 19520 576 ## COG4160 ABC-type arginine/histidine transport system, permease component 19 9 Op 4 3/0.647 + CDS 19528 - 20301 256 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Term 20308 - 20345 6.0 + Prom 20410 - 20469 3.4 20 10 Tu 1 . + CDS 20498 - 21400 504 ## COG5464 Uncharacterized conserved protein - Term 21264 - 21316 -0.8 21 11 Op 1 3/0.647 - CDS 21448 - 22341 834 ## COG1090 Predicted nucleoside-diphosphate sugar epimerase 22 11 Op 2 3/0.647 - CDS 22362 - 22724 409 ## COG1539 Dihydroneopterin aldolase 23 11 Op 3 . - CDS 22781 - 23428 574 ## COG0625 Glutathione S-transferase - Prom 23457 - 23516 3.9 + Prom 23477 - 23536 2.0 24 12 Op 1 2/0.824 + CDS 23564 - 24208 563 ## COG0625 Glutathione S-transferase 25 12 Op 2 3/0.647 + CDS 24264 - 24815 567 ## COG0622 Predicted phosphoesterase 26 13 Tu 1 . + CDS 24873 - 25415 656 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 25423 - 25448 -0.5 - Term 25408 - 25438 3.0 27 14 Tu 1 . - CDS 25448 - 26968 1620 ## COG1288 Predicted membrane protein - Prom 27069 - 27128 4.1 - Term 27080 - 27120 6.8 28 15 Op 1 14/0.000 - CDS 27158 - 29302 2439 ## COG0857 BioD-like N-terminal domain of phosphotransacetylase - Term 29334 - 29373 10.1 29 15 Op 2 . - CDS 29377 - 30579 1324 ## COG0282 Acetate kinase - Prom 30801 - 30860 3.0 + Prom 30700 - 30759 4.8 30 16 Op 1 2/0.824 + CDS 30917 - 31372 387 ## COG3092 Uncharacterized protein conserved in bacteria + Term 31398 - 31428 -0.5 31 16 Op 2 . + CDS 31455 - 31949 648 ## COG3013 Uncharacterized conserved protein 32 16 Op 3 2/0.824 + CDS 31960 - 32610 551 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 32630 - 32659 1.1 + Prom 32612 - 32671 2.5 33 17 Tu 1 . + CDS 32697 - 34529 1592 ## COG0471 Di- and tricarboxylate transporters + Term 34759 - 34794 -0.5 34 18 Op 1 6/0.235 - CDS 34588 - 35187 746 ## COG1896 Predicted hydrolases of HD superfamily 35 18 Op 2 . - CDS 35271 - 36488 1129 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 36540 - 36599 1.9 36 19 Tu 1 . + CDS 37408 - 38346 897 ## COG0583 Transcriptional regulator + Term 38390 - 38435 9.3 - Term 38378 - 38421 8.0 37 20 Tu 1 . - CDS 38550 - 38714 67 ## ECBD_1372 hypothetical protein - Prom 38817 - 38876 3.9 + Prom 38828 - 38887 5.9 38 21 Op 1 30/0.000 + CDS 38983 - 39420 482 ## COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) 39 21 Op 2 9/0.059 + CDS 39436 - 40098 718 ## COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 40 22 Op 1 15/0.000 + CDS 40204 - 41994 2233 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 41 22 Op 2 23/0.000 + CDS 41997 - 42497 484 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 42 22 Op 3 12/0.000 + CDS 42494 - 43831 1485 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 43 22 Op 4 18/0.000 + CDS 43884 - 46610 2874 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 44 22 Op 5 31/0.000 + CDS 46607 - 47584 1212 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 45 22 Op 6 28/0.000 + CDS 47599 - 48141 712 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 46 22 Op 7 30/0.000 + CDS 48153 - 48707 787 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 47 22 Op 8 26/0.000 + CDS 48704 - 49006 478 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 48 22 Op 9 30/0.000 + CDS 49003 - 50844 2264 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit + Prom 50916 - 50975 1.9 49 22 Op 10 22/0.000 + CDS 51008 - 52537 1750 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) 50 22 Op 11 . + CDS 52544 - 54001 1822 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) + Term 54021 - 54060 4.1 - Term 54012 - 54044 3.0 51 23 Tu 1 . - CDS 54068 - 54571 574 ## SDY_2471 hypothetical protein - Prom 54597 - 54656 5.4 - Term 55627 - 55675 9.2 52 24 Op 1 . - CDS 55692 - 56063 128 ## ECUMN_2612 deubiquitinase - Prom 56143 - 56202 6.3 53 24 Op 2 . - CDS 56253 - 56909 302 ## ECO26_3260 deubiquitinase - Prom 56969 - 57028 4.0 - Term 57052 - 57078 -0.6 54 25 Tu 1 . - CDS 57100 - 58017 613 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III - Prom 58043 - 58102 5.0 + Prom 58002 - 58061 4.9 55 26 Op 1 4/0.471 + CDS 58082 - 58543 514 ## COG2153 Predicted acyltransferase 56 26 Op 2 1/0.882 + CDS 58598 - 58903 508 ## COG4575 Uncharacterized conserved protein 57 26 Op 3 10/0.059 + CDS 58982 - 60124 895 ## COG1169 Isochorismate synthase + SSU_RRNA 60120 - 60473 99.0 # AY958844 [D:1..1893] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. + Prom 60399 - 60458 80.4 58 27 Op 1 15/0.000 + CDS 60582 - 62036 1510 ## COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 59 27 Op 2 9/0.059 + CDS 62033 - 62791 552 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 60 27 Op 3 5/0.294 + CDS 62806 - 63663 914 ## COG0447 Dihydroxynaphthoic acid synthase 61 27 Op 4 6/0.235 + CDS 63663 - 64625 994 ## COG1441 O-succinylbenzoate synthase 62 27 Op 5 . + CDS 64622 - 65977 1166 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Prom 65994 - 66053 4.9 63 28 Tu 1 . + CDS 66087 - 66353 196 ## ECUMN_2602 polymyxin resistance protein B + Term 66490 - 66533 2.9 64 29 Op 1 9/0.059 - CDS 66347 - 66733 457 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 65 29 Op 2 5/0.294 - CDS 66733 - 67068 347 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 66 29 Op 3 6/0.235 - CDS 67065 - 68717 1452 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 67 29 Op 4 8/0.059 - CDS 68717 - 69607 842 ## COG0726 Predicted xylanase/chitin deacetylase 68 29 Op 5 12/0.000 - CDS 69604 - 71586 1662 ## COG0451 Nucleoside-diphosphate-sugar epimerases 69 29 Op 6 5/0.294 - CDS 71586 - 72554 907 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 70 29 Op 7 . - CDS 72558 - 73715 859 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - Prom 73753 - 73812 7.4 + Prom 73798 - 73857 5.8 71 30 Tu 1 . + CDS 74005 - 74607 272 ## SFV_2322 protein induced by aluminum + Term 74618 - 74653 5.1 - Term 74599 - 74642 1.6 72 31 Tu 1 . - CDS 74646 - 75071 412 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 75214 - 75273 6.4 73 32 Op 1 . + CDS 75384 - 75893 563 ## EcSMS35_2404 outer membrane protein, YfaZ + Prom 75912 - 75971 4.2 74 32 Op 2 1/0.882 + CDS 75993 - 77195 1197 ## COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA 75 33 Tu 1 . + CDS 77331 - 77720 369 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase + Term 77724 - 77768 4.2 76 34 Tu 1 . - CDS 77761 - 78663 691 ## COG5464 Uncharacterized conserved protein - Prom 78690 - 78749 1.9 - Term 78804 - 78844 10.6 77 35 Op 1 8/0.059 - CDS 78857 - 80047 1127 ## COG0247 Fe-S oxidoreductase 78 35 Op 2 9/0.059 - CDS 80044 - 81303 1084 ## COG3075 Anaerobic glycerol-3-phosphate dehydrogenase 79 35 Op 3 . - CDS 81293 - 82921 1773 ## COG0578 Glycerol-3-phosphate dehydrogenase - Prom 83045 - 83104 3.5 + Prom 83039 - 83098 5.1 80 36 Op 1 6/0.235 + CDS 83194 - 84552 1415 ## COG2271 Sugar phosphate permease 81 36 Op 2 . + CDS 84557 - 85633 1205 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Term 85644 - 85677 4.5 + Prom 85851 - 85910 4.5 82 37 Tu 1 . + CDS 86095 - 86745 516 ## EcolC_1414 hypothetical protein - Term 86671 - 86703 -0.9 83 38 Op 1 8/0.059 - CDS 86799 - 87053 184 ## COG0633 Ferredoxin 84 38 Op 2 24/0.000 - CDS 87053 - 88183 1516 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 88206 - 88265 2.2 85 38 Op 3 . - CDS 88272 - 90557 2821 ## COG0209 Ribonucleotide reductase, alpha subunit - Prom 90694 - 90753 2.5 + Prom 91027 - 91086 7.2 86 39 Tu 1 . + CDS 91301 - 94987 2802 ## COG3468 Type V secretory pathway, adhesin AidA + Term 95184 - 95214 0.2 87 40 Tu 1 . - CDS 95115 - 95837 801 ## COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase - Prom 95864 - 95923 5.2 + Prom 95887 - 95946 6.4 88 41 Tu 1 . + CDS 95984 - 98611 3245 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 98633 - 98659 -1.0 + Prom 98626 - 98685 3.5 89 42 Op 1 2/0.824 + CDS 98760 - 100448 1388 ## COG4685 Uncharacterized protein conserved in bacteria 90 42 Op 2 3/0.647 + CDS 100445 - 101068 315 ## COG3234 Uncharacterized protein conserved in bacteria 91 42 Op 3 4/0.471 + CDS 101002 - 105606 3947 ## COG2373 Large extracellular alpha-helical protein 92 42 Op 4 5/0.294 + CDS 105607 - 107256 1131 ## COG5445 Predicted secreted protein 93 42 Op 5 . + CDS 107261 - 108037 588 ## COG4676 Uncharacterized protein conserved in bacteria + Term 108217 - 108265 -1.0 94 43 Tu 1 . + CDS 108360 - 111161 1919 ## COG0642 Signal transduction histidine kinase + Term 111174 - 111236 7.0 - Term 111160 - 111222 7.0 95 44 Op 1 12/0.000 - CDS 111361 - 112011 854 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 96 44 Op 2 . - CDS 112028 - 114700 2534 ## COG0642 Signal transduction histidine kinase - Prom 114920 - 114979 5.3 97 45 Tu 1 . + CDS 115438 - 116544 1445 ## COG3203 Outer membrane protein (porin) + Term 116559 - 116600 5.0 + Prom 116572 - 116631 3.5 98 46 Op 1 3/0.647 + CDS 116656 - 117711 1304 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 99 46 Op 2 4/0.471 + CDS 117785 - 118849 640 ## COG2169 Adenosine deaminase 100 46 Op 3 4/0.471 + CDS 118849 - 119499 531 ## COG3145 Alkylated DNA repair protein 101 46 Op 4 3/0.647 + CDS 119575 - 121218 195 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Prom 121286 - 121345 5.9 102 47 Tu 1 . + CDS 121436 - 123082 1887 ## COG0579 Predicted dehydrogenase - Term 123123 - 123160 -0.5 103 48 Tu 1 . - CDS 123231 - 123719 546 ## COG4574 Serine protease inhibitor ecotin - Prom 123913 - 123972 6.4 104 49 Op 1 10/0.059 + CDS 124611 - 124874 339 ## COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase 105 49 Op 2 . + CDS 124871 - 126341 1775 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing Predicted protein(s) >gi|299856437|gb|ADWV01000014.1| GENE 1 239 - 2245 1385 668 aa, chain - ## HITS:1 COG:yfcK_2 KEGG:ns NR:ns ## COG: yfcK_2 COG0665 # Protein_GI_number: 16130259 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli K12 # 256 668 1 413 413 830 99.0 0 MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLF VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPEL APWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF APAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREML CGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPA LGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWNEKS QHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQ QQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSHTSTLPVYSVA GQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQ RLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEA VSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLL KGKAVKAG >gi|299856437|gb|ADWV01000014.1| GENE 2 2404 - 3624 1337 406 aa, chain + ## HITS:1 COG:fabB KEGG:ns NR:ns ## COG: fabB COG0304 # Protein_GI_number: 16130258 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli K12 # 1 406 1 406 406 770 100.0 0 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLDTTGLI DRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAM RGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLG KQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVV EELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMKMAMHGVDTPIDYLNSHGT STPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN IEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKLKD >gi|299856437|gb|ADWV01000014.1| GENE 3 3917 - 5095 1074 392 aa, chain + ## HITS:1 COG:yfcJ KEGG:ns NR:ns ## COG: yfcJ COG0477 # Protein_GI_number: 16130257 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 392 1 392 392 589 99.0 1e-168 MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYGNTMVGIAVGIQ FLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAAILPVSAPFKFALLVVGRL ILGFGESQLLTGALTWGLGIVGPKHSGKVMSWNGMAIYGALAVGAPLGLLIHSHYGFAAL AITTMVLPVLAWACNGTVRKVPALAEERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFVS LYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRFGGVKVAIVSLLVETVGLLLLWQAP GAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIALGVSGPLAGM LATTFGYSSVFLAGAISAVLGIIVTILSFRRG >gi|299856437|gb|ADWV01000014.1| GENE 4 5092 - 6087 880 331 aa, chain - ## HITS:1 COG:no KEGG:ECO103_2785 NR:ns ## KEGG: ECO103_2785 # Name: flk # Def: flagella biosynthesis regulator # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 331 1 331 331 519 100.0 1e-146 MIQPISGPPPGQPPGQGDNLPSGAGNQPLSSQQRTSLESLMTKVTSLTQQQRAELWAGIR HDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQLGEYLRLGNNRQAVTDYI RHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREATDRPLLPAEHNALKQLVTKLA AATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWLQARQTLSQQNTPTLESLQMALK QPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDILNQLYQRRVKGIDPRDMQPLLNPFP PMMDTLQNMATRPALWILLVAIILMLVWLVR >gi|299856437|gb|ADWV01000014.1| GENE 5 6186 - 7322 1154 378 aa, chain + ## HITS:1 COG:ECs3204 KEGG:ns NR:ns ## COG: ECs3204 COG0111 # Protein_GI_number: 15832458 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 378 1 378 378 737 98.0 0 MKILVDENMPYARDLFSRLGEVTAVPGRPIPVAQLADADALMVRSVTKVNESLLAGKPIK FVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSSLLMLAERDGFSLHDRTVG IVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQHADILTFHTPLFKD GPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPEL NVELLTKVDIGTPHIAGYTLEGKARGTTQVFEAYSKFIGHEQHVALDTLLPAPEFGRITL HGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPGEFDKLRKNYLERREWSSLYVICDDAS AASLLCKLGFNAVHHPAR >gi|299856437|gb|ADWV01000014.1| GENE 6 7388 - 8401 1280 337 aa, chain + ## HITS:1 COG:usg KEGG:ns NR:ns ## COG: usg COG0136 # Protein_GI_number: 16130254 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Escherichia coli K12 # 1 337 1 337 337 641 99.0 0 MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAGEQLRFGGKTITVQDAA EFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFALEPDVPLVVPEVNPFVLTD YRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLISASAQGKKAVDALAGQSAKLL NGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVDEVRKILQDEGLMISASVVQAPV FYGHAQMVNFEALRPLAAEEARDAFAQGEDIVLSEENEFPTQVGDASGTPHLSVGCVRND YGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQEYLY >gi|299856437|gb|ADWV01000014.1| GENE 7 8401 - 9213 597 270 aa, chain + ## HITS:1 COG:ECs3202 KEGG:ns NR:ns ## COG: ECs3202 COG0101 # Protein_GI_number: 15832456 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Escherichia coli O157:H7 # 1 270 1 270 270 553 99.0 1e-157 MSDQQQLPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTD AGVHGTGQVVHFETTAQRKDAAWTLGVNANLPGDIAVRWVKAVPDDFHARFSATARRYRY IIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMH INVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATA KAEGLYLVAVDYPDRYDLPKPPMGPLFLAD >gi|299856437|gb|ADWV01000014.1| GENE 8 9296 - 9955 564 219 aa, chain + ## HITS:1 COG:STM2367 KEGG:ns NR:ns ## COG: STM2367 COG0586 # Protein_GI_number: 16765694 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Salmonella typhimurium LT2 # 1 219 1 219 219 388 96.0 1e-108 MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA LASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQF YEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGT IPMVQDNLKLLIVGIIVVSILPGVIEIIRHKRAAARAAK >gi|299856437|gb|ADWV01000014.1| GENE 9 10111 - 11025 1040 304 aa, chain + ## HITS:1 COG:ECs3200 KEGG:ns NR:ns ## COG: ECs3200 COG0777 # Protein_GI_number: 15832454 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Escherichia coli O157:H7 # 1 304 1 304 304 584 100.0 1e-167 MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNR LHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPV VAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKT SAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREK LPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPNPEAPREGVVVPPVPDQ EPEA >gi|299856437|gb|ADWV01000014.1| GENE 10 11095 - 12363 1304 422 aa, chain + ## HITS:1 COG:ECs3199 KEGG:ns NR:ns ## COG: ECs3199 COG0285 # Protein_GI_number: 15832453 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Escherichia coli O157:H7 # 1 422 1 422 422 813 99.0 0 MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSQVAARLGVLKPAPFVFTVAGTNGK GTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPESAHTASFAEIESARGDIS LTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVDADVAVVTSIALDHTDWLGPD RESIGREKAGIFRSEKPAIVGEPEMPSTIADVAQEKGALLQRRGVEWNYSVTDHDWAFSD AHGTLENLPLPLVPQPNAATALAALRASGLEVSENAIRDGIASAILPGRFQIVSESPRVI FDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLHDKDIAGTLAWLKSVVDDWYCAPLEGP RGATAEQLLEHLGNGKSFDSVAQAWDAAMADAKAEDTVLVCGSFHTVAHVMEVIDARRSG GK >gi|299856437|gb|ADWV01000014.1| GENE 11 12353 - 13015 687 220 aa, chain + ## HITS:1 COG:ZdedD KEGG:ns NR:ns ## COG: ZdedD COG3147 # Protein_GI_number: 15802861 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 220 1 220 220 296 99.0 2e-80 MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAAT QALPTQPPEGAAEEVRAGDAAAPSLDPTTIAANNTEFEPEPAPVAPPKPKPVEPPKPKVE APPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQ GKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN >gi|299856437|gb|ADWV01000014.1| GENE 12 13274 - 13762 414 162 aa, chain + ## HITS:1 COG:cvpA KEGG:ns NR:ns ## COG: cvpA COG1286 # Protein_GI_number: 16130248 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Escherichia coli K12 # 1 162 1 162 162 268 99.0 4e-72 MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELV RNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFL DSFTGVSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLPRA >gi|299856437|gb|ADWV01000014.1| GENE 13 13799 - 15316 1641 505 aa, chain + ## HITS:1 COG:purF KEGG:ns NR:ns ## COG: purF COG0034 # Protein_GI_number: 16130247 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Escherichia coli K12 # 1 505 1 505 505 1027 100.0 0 MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARH MQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKR RHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMV AFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLF TRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVI PIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRD KNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHG REVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLD TLRNDDAKAVQRQNEVENLEMHNEG >gi|299856437|gb|ADWV01000014.1| GENE 14 15411 - 15980 521 189 aa, chain + ## HITS:1 COG:ECs3195 KEGG:ns NR:ns ## COG: ECs3195 COG0163 # Protein_GI_number: 15832449 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Escherichia coli O157:H7 # 1 189 1 189 189 352 98.0 3e-97 MKRLIVGISGASGAIYGVRLLQVLRDVADIETHLVMSQAARQTLSLETGFSLREVQALAD VTHDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVL CVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFAITLPE DLFARWQGA >gi|299856437|gb|ADWV01000014.1| GENE 15 16246 - 17028 1020 260 aa, chain + ## HITS:1 COG:argT KEGG:ns NR:ns ## COG: argT COG0834 # Protein_GI_number: 16130245 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli K12 # 1 260 1 260 260 464 99.0 1e-131 MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMC KRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAK GSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAA LQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELR QDGTYDKMAKKYFDFNVYGD >gi|299856437|gb|ADWV01000014.1| GENE 16 17249 - 18031 949 260 aa, chain + ## HITS:1 COG:ECs3193 KEGG:ns NR:ns ## COG: ECs3193 COG0834 # Protein_GI_number: 15832447 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 24 260 24 260 260 464 100.0 1e-131 MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNSQGELVGFDIDLAKELC KRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAK NSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAA FQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMR ADGTYEKLAKKYFDFDVYGG >gi|299856437|gb|ADWV01000014.1| GENE 17 18121 - 18807 727 228 aa, chain + ## HITS:1 COG:hisQ KEGG:ns NR:ns ## COG: hisQ COG4215 # Protein_GI_number: 16130243 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Escherichia coli K12 # 1 228 1 228 228 394 99.0 1e-109 MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVP DLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVP KGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKAT QLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKRADL >gi|299856437|gb|ADWV01000014.1| GENE 18 18804 - 19520 576 238 aa, chain + ## HITS:1 COG:ECs3191 KEGG:ns NR:ns ## COG: ECs3191 COG4160 # Protein_GI_number: 15832445 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Escherichia coli O157:H7 # 1 238 1 238 238 434 100.0 1e-122 MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFLAIGRVSSNKYIQFPIW LFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEI FAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTA TVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKRWLQHVKPSSTH >gi|299856437|gb|ADWV01000014.1| GENE 19 19528 - 20301 256 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 20 232 20 221 223 103 34 5e-21 MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEG SIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQV LGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPT SALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSTHVIFLHQGKIEEEGAPEQLF GNPQSPRLQQFLKGSLK >gi|299856437|gb|ADWV01000014.1| GENE 20 20498 - 21400 504 300 aa, chain + ## HITS:1 COG:yfcI KEGG:ns NR:ns ## COG: yfcI COG5464 # Protein_GI_number: 16130240 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 300 1 296 296 568 96.0 1e-162 MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTTLKLEPNSFIDDDLRQY YSDLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAAMQNHLDAGYKELPLVIPM LFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDITVVPDDEIMQHRKMALLELIQ KHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQTGDAQRFRAFIGEIAERAPQEK EKLMTIADRLREEGRNDGLILGKREEALRIAQEMLDRGLDRELVMMVTRLSPDDLIAQSH >gi|299856437|gb|ADWV01000014.1| GENE 21 21448 - 22341 834 297 aa, chain - ## HITS:1 COG:yfcH KEGG:ns NR:ns ## COG: yfcH COG1090 # Protein_GI_number: 16130239 # Func_class: R General function prediction only # Function: Predicted nucleoside-diphosphate sugar epimerase # Organism: Escherichia coli K12 # 1 297 1 297 297 607 99.0 1e-173 MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPRVTLWQGLADQSNLNGV DAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGD LGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDGGILGKMLPP FRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNELRGPFNMVSPYPIRNEQFAHALGHA LHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEEALADVVR >gi|299856437|gb|ADWV01000014.1| GENE 22 22362 - 22724 409 120 aa, chain - ## HITS:1 COG:ECs3187 KEGG:ns NR:ns ## COG: ECs3187 COG1539 # Protein_GI_number: 15832441 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Escherichia coli O157:H7 # 1 120 1 120 120 211 100.0 2e-55 MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADKARTSEDINDALNYRTV TKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDKLHALRYADSVSMTLSWQR >gi|299856437|gb|ADWV01000014.1| GENE 23 22781 - 23428 574 215 aa, chain - ## HITS:1 COG:yfcG KEGG:ns NR:ns ## COG: yfcG COG0625 # Protein_GI_number: 16130237 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli K12 # 1 215 1 215 215 442 100.0 1e-124 MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSP ADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNH AAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDL AMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS >gi|299856437|gb|ADWV01000014.1| GENE 24 23564 - 24208 563 214 aa, chain + ## HITS:1 COG:yfcF KEGG:ns NR:ns ## COG: yfcF COG0625 # Protein_GI_number: 16130236 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli K12 # 1 214 1 214 214 420 100.0 1e-117 MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQTRRVP LLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREER PTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLVLGQPNLFGEWCIADTDLALMINRLVL HGDEVPERLVDYATFQWQRASVQRFIALSAKQSG >gi|299856437|gb|ADWV01000014.1| GENE 25 24264 - 24815 567 183 aa, chain + ## HITS:1 COG:ECs3184 KEGG:ns NR:ns ## COG: ECs3184 COG0622 # Protein_GI_number: 15832438 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Escherichia coli O157:H7 # 1 183 2 184 184 362 100.0 1e-100 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVAERLN EVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPALNQND VLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGMLDNDVLSVIALNDQSIIAQVA INP >gi|299856437|gb|ADWV01000014.1| GENE 26 24873 - 25415 656 180 aa, chain + ## HITS:1 COG:ECs3183 KEGG:ns NR:ns ## COG: ECs3183 COG0494 # Protein_GI_number: 15832437 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 180 1 180 180 329 100.0 1e-90 MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVVHDGMGKILVQRRTETK DFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQFYFEDKNCRVWGALF SCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMKRNAKNEAVETETAE >gi|299856437|gb|ADWV01000014.1| GENE 27 25448 - 26968 1620 506 aa, chain - ## HITS:1 COG:yfcC KEGG:ns NR:ns ## COG: yfcC COG1288 # Protein_GI_number: 16130233 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 506 8 513 513 921 100.0 0 MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQEVQYQVDGQTKTRKVV DPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTSGSKYGTAVGIIMFMLVIG GAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSLGGAVFGMGEEAVAFAIIIAP LMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQGIAGVPVLSGSGLRIVVWVIAT LIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQRPFTFGDWLVLIVLTAVMVWV IWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRLNGMTVNTMASSFTEGARMMIAPALLV GFAKGILLLVGNGEAGDASVLNTILNSIANAISGLDNAVAAWFMLLFQAVFNFFVTSGSG QAALTMPLLAPLGDLVGVNRQVTVLAFQFGDGFSHIIYPTSASLMATLGVCRVDFRNWLK VGATLLGLLFIMSSVVVIGAQLMGYH >gi|299856437|gb|ADWV01000014.1| GENE 28 27158 - 29302 2439 714 aa, chain - ## HITS:1 COG:pta_1 KEGG:ns NR:ns ## COG: pta_1 COG0857 # Protein_GI_number: 16130232 # Func_class: R General function prediction only # Function: BioD-like N-terminal domain of phosphotransacetylase # Organism: Escherichia coli K12 # 1 391 1 391 391 752 100.0 0 MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRTGGDAPDQTTTIVRAN SSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDAEVVLVEGLVPTRKHQFAQ SLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFGGAKNTNITGVIVNKLNAPVD EQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVLGAVPWSFDLIATRAIDMARHLN ATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSLLVTSADRPDVLVAACLAAMNGVEI GALLLTGGYEMDARISKLCERAFATGLPVFMVNTNTWQTSLSLQSFNLEVPVDDHERIEK VQEYVANYINADWIESLTATSERSRRLSPPAFRYQLTELARKAGKRIVLPEGDEPRTVKA AAICAERGIATCVLLGNPAEINRVAASQGVELGAGIEIVDPEVVRESYVGRLVELRKNKG MTETVAREQLEDNVVLGTLMLEQDEVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSV FFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGS DVEKVREATRLAQEKRPDLMIDGPLQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTG NTTYKAVQRSADLISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ >gi|299856437|gb|ADWV01000014.1| GENE 29 29377 - 30579 1324 400 aa, chain - ## HITS:1 COG:ECs3180 KEGG:ns NR:ns ## COG: ECs3180 COG0282 # Protein_GI_number: 15832434 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 803 100.0 0 MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARIKWKMDGNKQEAALGAG AAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSSVVIDESVIQGIKDAASFA PLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEESYLYALPYNLYKEHGIRRYG AHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVSAIRNGKCVDTSMGLTPLEGLVM GTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGLLGLTEVTSDCRYVEDNYATKEDAK RAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGIGENAAMVRELSLGKLGVLGFEVDHER NLAARFGKSGFINKEGTRPAVVIPTNEELVIAQDASRLTA >gi|299856437|gb|ADWV01000014.1| GENE 30 30917 - 31372 387 151 aa, chain + ## HITS:1 COG:yfbV KEGG:ns NR:ns ## COG: yfbV COG3092 # Protein_GI_number: 16130230 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 151 1 151 151 296 100.0 7e-81 MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLC WQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAILNWFYEVRGKLQESGQVL APVEGKPDYQALADTLKRAFKQLDKTFLDDL >gi|299856437|gb|ADWV01000014.1| GENE 31 31455 - 31949 648 164 aa, chain + ## HITS:1 COG:ECs3178 KEGG:ns NR:ns ## COG: ECs3178 COG3013 # Protein_GI_number: 15832432 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 164 7 170 170 318 100.0 3e-87 MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQMRELDREFGELKEETCR TIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEARYLGYVRFMVNVEGRYTHF DAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLSANEINQIINA >gi|299856437|gb|ADWV01000014.1| GENE 32 31960 - 32610 551 216 aa, chain + ## HITS:1 COG:ECs3177 KEGG:ns NR:ns ## COG: ECs3177 COG0637 # Protein_GI_number: 15832431 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 394 99.0 1e-110 MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIHGKQAITSLRHFMAGKS EADIAAEFTRLEHIEATETEGITALPGAIALLNHLNKAGIPWAIVTSGSMPVARARHKIA GLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIA VNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ >gi|299856437|gb|ADWV01000014.1| GENE 33 32697 - 34529 1592 610 aa, chain + ## HITS:1 COG:ECs3176 KEGG:ns NR:ns ## COG: ECs3176 COG0471 # Protein_GI_number: 15832430 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 610 1 610 610 1085 100.0 0 MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLTVPEVFSGFSDPNVVLI AALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTVAGLGAFMSSTGVVAIFIP VVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGYHGFSFFSVTP IGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFRDLIREYRLTGRARRLAIRPGSP MIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAADVDLRQ FCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPESELIGKSVREIGFRTRYGLNVVGLKR NGVALEGSLADEPLLLGDIILVVGNWKLIGMLAKQGRDFVALNLPEEVSEASPAHSQAPH AIFCLVLMVALMLTDEIPNPVAAIIACLLMGKFRCIDAESAYKSIHWPSIILIVGMMPFA VALQKTGGVALAVKGLMDIGGGYGPHMMLGCLFVLSAVIGLFISNTATAVLMAPIALAAA KTMGVSPYPFAMVVAMAASAAFMTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVC VVMIPMLFPF >gi|299856437|gb|ADWV01000014.1| GENE 34 34588 - 35187 746 199 aa, chain - ## HITS:1 COG:ECs3175 KEGG:ns NR:ns ## COG: ECs3175 COG1896 # Protein_GI_number: 15832429 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Escherichia coli O157:H7 # 1 199 1 199 199 372 100.0 1e-103 MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAER IALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLVDMVPEELRDIFAPLI DEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFME VFVPSFHLSLDEISQDSPL >gi|299856437|gb|ADWV01000014.1| GENE 35 35271 - 36488 1129 405 aa, chain - ## HITS:1 COG:yfbQ KEGG:ns NR:ns ## COG: yfbQ COG0436 # Protein_GI_number: 16130225 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 405 1 405 405 853 100.0 0 MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIR NLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGD EMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNP TGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSK TYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFI TPGGRLYEQRNRAWELINDIPGVSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEK VLLVQGTAFNWPWPDHFRIVTLPRVDDIELSLSKFARFLSGYHQL >gi|299856437|gb|ADWV01000014.1| GENE 36 37408 - 38346 897 312 aa, chain + ## HITS:1 COG:lrhA KEGG:ns NR:ns ## COG: lrhA COG0583 # Protein_GI_number: 16130224 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 312 1 312 312 600 100.0 1e-171 MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFAR HGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNR VSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPV EMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPE GDDSLLIERDIE >gi|299856437|gb|ADWV01000014.1| GENE 37 38550 - 38714 67 54 aa, chain - ## HITS:1 COG:no KEGG:ECBD_1372 NR:ns ## KEGG: ECBD_1372 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 54 1 54 54 95 100.0 4e-19 MLLNRVRCEAMEKIRVYFDRNLCRFLPPKESIFLICDTLLSFHNKNAATNLRIF >gi|299856437|gb|ADWV01000014.1| GENE 38 38983 - 39420 482 145 aa, chain + ## HITS:1 COG:ECs3172 KEGG:ns NR:ns ## COG: ECs3172 COG0838 # Protein_GI_number: 15832426 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 3 (chain A) # Organism: Escherichia coli O157:H7 # 1 145 3 147 147 266 100.0 9e-72 MSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARSKNVPFESGIDSVGSARL RLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGA LDWTPARSRRERMNPETNSIANRQR >gi|299856437|gb|ADWV01000014.1| GENE 39 39436 - 40098 718 220 aa, chain + ## HITS:1 COG:ECs3171 KEGG:ns NR:ns ## COG: ECs3171 COG0377 # Protein_GI_number: 15832425 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases # Organism: Escherichia coli O157:H7 # 1 220 1 220 220 457 100.0 1e-129 MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEP KWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER RPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI >gi|299856437|gb|ADWV01000014.1| GENE 40 40204 - 41994 2233 596 aa, chain + ## HITS:1 COG:nuoC_2 KEGG:ns NR:ns ## COG: nuoC_2 COG0649 # Protein_GI_number: 16130221 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Escherichia coli K12 # 198 596 1 399 399 841 99.0 0 MTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFL KKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHV PTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFE LTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVD CVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVN VIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFR IGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGT TGADLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQC LNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGIN SYYLTSDGSTMSYRTRIRTPSYAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR >gi|299856437|gb|ADWV01000014.1| GENE 41 41997 - 42497 484 166 aa, chain + ## HITS:1 COG:nuoE KEGG:ns NR:ns ## COG: nuoE COG1905 # Protein_GI_number: 16130220 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Escherichia coli K12 # 1 166 1 166 166 340 100.0 8e-94 MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIHAIAD VLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQT TFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPELLERYK >gi|299856437|gb|ADWV01000014.1| GENE 42 42494 - 43831 1485 445 aa, chain + ## HITS:1 COG:ECs3168 KEGG:ns NR:ns ## COG: ECs3168 COG1894 # Protein_GI_number: 15832422 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Escherichia coli O157:H7 # 1 445 1 445 445 925 100.0 0 MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLK GRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISA FALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYIC GEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNNVETLCNVPAILANGVEWYQNIS KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFL TEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDG LPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFE AGIKQPFSNTHLINGIQPNLLKERW >gi|299856437|gb|ADWV01000014.1| GENE 43 43884 - 46610 2874 908 aa, chain + ## HITS:1 COG:ECs3167 KEGG:ns NR:ns ## COG: ECs3167 COG1034 # Protein_GI_number: 15832421 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Escherichia coli O157:H7 # 1 908 3 910 910 1893 99.0 0 MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTR GRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVM TGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRYYKDYADGTDLGVYGAHDNVY FGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRKWDMQFAPSICQQCSIGCNISPG ERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLKDRPRQPVQRRGDDFITLNAEQAMQ GAADILRQSKKVIGIGSPRASVESNFALRELVGEENFYTGIAHGEQERLQLALKVLREGG IYTPALREIESYDAVLVLGEDVTQTGARVALAVRQAVKGKAREMAAAQKVADWQIAAILN IGQRAKHPLFVTNVDDTRLDDIAAWTYRAPVEDQARLGFAIAHALDNSAPAVDGIEPELQ SKIDVIVQALAGAKKPLIISGTNAGSIEVIQAAANVAKALKGRGADVGITMIARSVNSMG LGIMGGGSLEEALTELETGRADAVVVLENDLHRHASATRVNAALAKAPLVMVVDHQRTAI MENAHLVLSAASFAESDGTVINNEGRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLL SREVDWTQLDHVIDAVVAKIPELAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANIS VHEPRQPQDIDTMFTFSMEGNNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGD PGVRLFETSENGLDYFTSVPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYI KLNPADAAKLGVNAGTHVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHL EDLKEAQQ >gi|299856437|gb|ADWV01000014.1| GENE 44 46607 - 47584 1212 325 aa, chain + ## HITS:1 COG:ECs3166 KEGG:ns NR:ns ## COG: ECs3166 COG1005 # Protein_GI_number: 15832420 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Escherichia coli O157:H7 # 1 325 1 325 325 593 100.0 1e-169 MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQL VADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFL MMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIV NSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG EYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSF GWKICLPLTLINLLVTAAVILWQAQ >gi|299856437|gb|ADWV01000014.1| GENE 45 47599 - 48141 712 180 aa, chain + ## HITS:1 COG:ECs3165 KEGG:ns NR:ns ## COG: ECs3165 COG1143 # Protein_GI_number: 15832419 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Escherichia coli O157:H7 # 1 180 1 180 180 371 100.0 1e-103 MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERC VACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDF EMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP >gi|299856437|gb|ADWV01000014.1| GENE 46 48153 - 48707 787 184 aa, chain + ## HITS:1 COG:ECs3164 KEGG:ns NR:ns ## COG: ECs3164 COG0839 # Protein_GI_number: 15832418 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Escherichia coli O157:H7 # 1 184 1 184 184 317 100.0 7e-87 MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYA GAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQGID GTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAGEVLSNRKDDSAKRKT EEHA >gi|299856437|gb|ADWV01000014.1| GENE 47 48704 - 49006 478 100 aa, chain + ## HITS:1 COG:ECs3163 KEGG:ns NR:ns ## COG: ECs3163 COG0713 # Protein_GI_number: 15832417 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Escherichia coli O157:H7 # 1 100 1 100 100 148 100.0 3e-36 MIPLQHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASALAFVVAGSYWGQTDGQV MYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG >gi|299856437|gb|ADWV01000014.1| GENE 48 49003 - 50844 2264 613 aa, chain + ## HITS:1 COG:nuoL KEGG:ns NR:ns ## COG: nuoL COG1009 # Protein_GI_number: 16130213 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Escherichia coli K12 # 1 613 1 613 613 1053 99.0 0 MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQSY SQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYT NLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVF LAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLA DAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALV QTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQ NIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLV GAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVTHSLPLIVLLILSTFVGALIVPPLQGVLP QTTELAHGSMLTLEITSGVVAVVGILLAAWLWLGKRTLVTSIANSAPGRLLGTWWYNAWG FDWLYDKVFVKPFLGIAWLLKRDPLNSMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSI GAVVVLALLMVLR >gi|299856437|gb|ADWV01000014.1| GENE 49 51008 - 52537 1750 509 aa, chain + ## HITS:1 COG:ECs3161 KEGG:ns NR:ns ## COG: ECs3161 COG1008 # Protein_GI_number: 15832415 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Escherichia coli O157:H7 # 1 509 1 509 509 889 100.0 0 MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGI PQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNL MWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQA SGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFY GAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCG QLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPV ITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF YPQPILDTSHSAIGNIQQWFVNSVTTTRP >gi|299856437|gb|ADWV01000014.1| GENE 50 52544 - 54001 1822 485 aa, chain + ## HITS:1 COG:ECs3160 KEGG:ns NR:ns ## COG: ECs3160 COG1007 # Protein_GI_number: 15832414 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Escherichia coli O157:H7 # 61 485 1 425 425 707 100.0 0 MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIGLNAALVSLWFVGQAGA MDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNKDEFYLLVLIAALGGILLA NANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAQ SGDLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVST FLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAIIAFASIIFGNLMALSQTNIKRLLGY SSISHLGYLLVALIALQTGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSPYRGPDADSLF SYRGLFWHRPILAAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVQAHLWWLVGAVVVGSAI GLYYYLRVAVSLYLHAPEQPGRDAPSNWQYSAGGIVVLISALLVLVLGVWPQPLISIVRL AMPLM >gi|299856437|gb|ADWV01000014.1| GENE 51 54068 - 54571 574 167 aa, chain - ## HITS:1 COG:no KEGG:SDY_2471 NR:ns ## KEGG: SDY_2471 # Name: yfbM # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 167 1 167 167 322 100.0 4e-87 MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFD PAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLESLDRSELRKQFSIKRLNEM EIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIVG >gi|299856437|gb|ADWV01000014.1| GENE 52 55692 - 56063 128 123 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_2612 NR:ns ## KEGG: ECUMN_2612 # Name: elaD # Def: deubiquitinase # Organism: E.coli_UMN026 # Pathway: not_defined # 1 123 280 402 402 238 98.0 4e-62 MGEMSNNNIKVHLNEPEIIFLHADLQQYLSQSCGAFVCMAAQEVIEQRESNSDSAPYTLL KNYADRFKKYSAEEQYEIDFQHRQVNRNCYLDKYGDANINDYYRDLEIKHSQPQNRASGK RVS >gi|299856437|gb|ADWV01000014.1| GENE 53 56253 - 56909 302 218 aa, chain - ## HITS:1 COG:no KEGG:ECO26_3260 NR:ns ## KEGG: ECO26_3260 # Name: elaD # Def: deubiquitinase # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 218 2 219 406 409 100.0 1e-113 MVTVVSNYCQLSQTQLSQTFAEKFTVTEELLQSLKKTALSGDEESIELLHNIALGYDEFG KKAEDILYHIVRNPTNETLSIIRLIKNACLKLYNLAHTATNSHLKPTGPDNSDVLLFKKL FSPSKLMTIIGDEIPLISEKQSLSKVLLNDENNELSDDTNFWDKNRQLTTDEIACYLQKI AANAKNTQVNYPTGLYVPYSTRTHLEDALNENIKSDPS >gi|299856437|gb|ADWV01000014.1| GENE 54 57100 - 58017 613 305 aa, chain - ## HITS:1 COG:elaC KEGG:ns NR:ns ## COG: elaC COG1234 # Protein_GI_number: 16130203 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Escherichia coli K12 # 1 305 7 311 311 627 99.0 1e-179 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKI FISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVE IGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKA GKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITME AKANSRGHSSTRQAATLAREAGVGKIIITHVSSRYDDKGCQHLLRECRSIFPATELANDF TVFNV >gi|299856437|gb|ADWV01000014.1| GENE 55 58082 - 58543 514 153 aa, chain + ## HITS:1 COG:elaA KEGG:ns NR:ns ## COG: elaA COG2153 # Protein_GI_number: 16130202 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Escherichia coli K12 # 1 153 1 153 153 312 99.0 2e-85 MIEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDLTGDNRHILGWKNDELV AYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLETCTHHWPDKPVYLGAQAHL QNFYQSFGFISVTEVYEEDGIPHIGMAREVIQA >gi|299856437|gb|ADWV01000014.1| GENE 56 58598 - 58903 508 101 aa, chain + ## HITS:1 COG:ECs3154 KEGG:ns NR:ns ## COG: ECs3154 COG4575 # Protein_GI_number: 15832408 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 84 1 84 101 146 100.0 8e-36 MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAEKALDDVKKRVSQASDS YYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR >gi|299856437|gb|ADWV01000014.1| GENE 57 58982 - 60124 895 380 aa, chain + ## HITS:1 COG:menF KEGG:ns NR:ns ## COG: menF COG1169 # Protein_GI_number: 16130200 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Escherichia coli K12 # 76 380 1 305 356 594 99.0 1e-170 MQSLTTALENLLRHLSQEIPATPGIRVIDIPFPLKDAFDALSWLASQQTYPQFYWQQRNG DEEAAVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDPSQGNLLLPRLEWRRCGGK ATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTTTREQHWPDKTGWTQLIELAT KTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLNLNCYHFYMAFDGENAFLGSSPE RLWRRRDKALRTEALAGTVANNPDDKQAQQLGEWLMADDKNQRENMLVVEDICQRLQADT QTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVICLHQLQPTAAVAGLPRDLARQFIARH EPFTREWYAGSAGYLSLQQS >gi|299856437|gb|ADWV01000014.1| GENE 58 60582 - 62036 1510 484 aa, chain + ## HITS:1 COG:menD KEGG:ns NR:ns ## COG: menD COG1165 # Protein_GI_number: 16130199 # Func_class: H Coenzyme transport and metabolism # Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase # Organism: Escherichia coli K12 # 1 484 73 556 556 966 99.0 0 MAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTH SISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDW WQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDV LSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDI EGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQL AHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRAS GKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMP QNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQ VSHL >gi|299856437|gb|ADWV01000014.1| GENE 59 62033 - 62791 552 252 aa, chain + ## HITS:1 COG:yfbB KEGG:ns NR:ns ## COG: yfbB COG0596 # Protein_GI_number: 16130198 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 252 1 252 252 510 99.0 1e-145 MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLYVDLPGHGGSAAISVDG FDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQGLAGLCGVIVEGGHPGLQNAEQ RAERQRSDRQWAQRFCTEPLTAVFADWYQQPVFASLNDDQRRELVALRSNNNGATLAAML EATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAAELAADCHVIPRAGHNAHRENPA GVIASLAQILRF >gi|299856437|gb|ADWV01000014.1| GENE 60 62806 - 63663 914 285 aa, chain + ## HITS:1 COG:menB KEGG:ns NR:ns ## COG: menB COG0447 # Protein_GI_number: 16130197 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Escherichia coli K12 # 1 285 1 285 285 602 100.0 1e-172 MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQAL ADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPK PVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKA REIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC DGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP >gi|299856437|gb|ADWV01000014.1| GENE 61 63663 - 64625 994 320 aa, chain + ## HITS:1 COG:ECs3149 KEGG:ns NR:ns ## COG: ECs3149 COG1441 # Protein_GI_number: 15832403 # Func_class: H Coenzyme transport and metabolism # Function: O-succinylbenzoate synthase # Organism: Escherichia coli O157:H7 # 1 320 1 320 320 624 99.0 1e-179 MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGEISPLPGFSQETWEEAQ SVLLAWVNNWLAGDCELPQMPSVAFGVSCALAELADTLPQAANYRAAPLCNGDPDDLILK LADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQFAKYVNP DYRHRIAFLEEPCKTRDDSRAFVRETGIAIAWDESLREPDFAFVAEEGVRAVVIKPTLTG SLEKVREQVQAAHALGLTAVISSSIESSLGLTQLARIAAWLTPDTIPGLDTLDLMQAQQV RRWPGSTLPVVEVDALERLL >gi|299856437|gb|ADWV01000014.1| GENE 62 64622 - 65977 1166 451 aa, chain + ## HITS:1 COG:menE KEGG:ns NR:ns ## COG: menE COG0318 # Protein_GI_number: 16130195 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli K12 # 1 451 1 451 451 847 98.0 0 MIFSDWPWRHWRQVRGEAIALRLNDEQLNWRELCARVDELASGFAAQGVVEGSGVMLRAW NTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQFALVPDGENTFPALTSLHI QRVEGAHAATWQPTRLCSMTLTSGSTGLPKAAVHTYQAHLASAEGVLSLIPFGDHDDWLL SLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGCTHASLVPTQLWRLLVNRSSVSL KAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFASTVCAKEADGLADVGSPLPGREVKI VNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYATRDRGEMHNGKLTIVGRLDNLFFSGGE GIQPEEVERVIAAHPAVLQVFIVPVADKEFGHRPVAVVEYDQQTVDLGEWVKDKLARFQQ PVRWLTLPPELKNGGIKISRQALKEWVQRQQ >gi|299856437|gb|ADWV01000014.1| GENE 63 66087 - 66353 196 88 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_2602 NR:ns ## KEGG: ECUMN_2602 # Name: pmrD # Def: polymyxin resistance protein B # Organism: E.coli_UMN026 # Pathway: not_defined # 1 88 1 88 88 172 100.0 3e-42 MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREK LHTVKVLSASSYSPDEWERQCTAAGKTQ >gi|299856437|gb|ADWV01000014.1| GENE 64 66347 - 66733 457 128 aa, chain - ## HITS:1 COG:yfbJ KEGG:ns NR:ns ## COG: yfbJ COG0697 # Protein_GI_number: 16130193 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 128 95 222 222 206 99.0 1e-53 MGLIWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLS VFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIF LPTTKQRY >gi|299856437|gb|ADWV01000014.1| GENE 65 66733 - 67068 347 111 aa, chain - ## HITS:1 COG:Z3516 KEGG:ns NR:ns ## COG: Z3516 COG0697 # Protein_GI_number: 15802807 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 EDL933 # 1 111 1 111 111 157 99.0 5e-39 MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLALACLGLAMVLWLLVLQN VPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGSTV >gi|299856437|gb|ADWV01000014.1| GENE 66 67065 - 68717 1452 550 aa, chain - ## HITS:1 COG:yfbI KEGG:ns NR:ns ## COG: yfbI COG1807 # Protein_GI_number: 16130192 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Escherichia coli K12 # 1 550 1 550 550 1045 99.0 0 MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLASGDWIVPHLLGLRYFE KPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFTLRLWRDKRLALLATVIYL SLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKGKSAGFLLLGITCGMGVMTKG FLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLTVLPWGLAIAQREPDFWHYFFWV EHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLPGALYTGWKNRKHSATVYLLSWTIM PLLFFSVAKGKLPTYILSCFASLAMLMAHYALLAAKNNPLALRINGWINIAFGVTGIIAT FVVSPWGPMNTPVWQTFESYKVFCAWSIFSLWAFFGWYTLTNVEKTWPFAALCPLGLALL VGFSIPDRVMEGKHPQFFVEMTQESLQPSRYILTDSVGVAAGLAWSLQRDDIIMYRQTGE LKYGLNYPDAKGRFVSGDEFANWLNQHRQEGIITLVLSVDRDEDINSLAIPPADAIDRQE RLVLIQYRPK >gi|299856437|gb|ADWV01000014.1| GENE 67 68717 - 69607 842 296 aa, chain - ## HITS:1 COG:yfbH KEGG:ns NR:ns ## COG: yfbH COG0726 # Protein_GI_number: 16130191 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli K12 # 1 296 1 296 296 613 100.0 1e-175 MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWK MLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQARSGNW DRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIEAKEAFHLRYNSDCRGAMPFR PLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRILRDKGTPVYTIHAEVEGCA YQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVVRGNIAGREGWLGCQQIAGSR >gi|299856437|gb|ADWV01000014.1| GENE 68 69604 - 71586 1662 660 aa, chain - ## HITS:1 COG:yfbG_2 KEGG:ns NR:ns ## COG: yfbG_2 COG0451 # Protein_GI_number: 16130190 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli K12 # 306 660 1 355 355 767 100.0 0 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPD DVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAPLNWV LVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQTLPAI KHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKF TVWSSRVHPHASKAQPGSVISIAPLLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLVQ GSRLNSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHP HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC VKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI RDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGF RVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS >gi|299856437|gb|ADWV01000014.1| GENE 69 71586 - 72554 907 322 aa, chain - ## HITS:1 COG:yfbF KEGG:ns NR:ns ## COG: yfbF COG0463 # Protein_GI_number: 16130189 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 322 1 322 322 657 99.0 0 MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVE ASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEG YDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHER STFIPILANIFARRAIEIPVHHSEREFGESKYSFMRLINLMYDLVTCLTTTPLRMLSLLG SIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYT DVRARPRYFVQQVIRPSSKENE >gi|299856437|gb|ADWV01000014.1| GENE 70 72558 - 73715 859 385 aa, chain - ## HITS:1 COG:yfbE KEGG:ns NR:ns ## COG: yfbE COG0399 # Protein_GI_number: 16130188 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Escherichia coli K12 # 1 385 6 390 390 748 98.0 0 MAEGKAMSEFLPFSRPAMGVEELAAVKEVLESGWLTTGPKNQALEQAFCQLTGNQHAIAV SSATAGMHITLMALEIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEAI ESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTA IFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGY KYNLTDINAAIALTQLAKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFI IRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICS LPLFPDMTTADADRVITALQQLAGQ >gi|299856437|gb|ADWV01000014.1| GENE 71 74005 - 74607 272 200 aa, chain + ## HITS:1 COG:no KEGG:SFV_2322 NR:ns ## KEGG: SFV_2322 # Name: ais # Def: protein induced by aluminum # Organism: S.flexneri_8401 # Pathway: not_defined # 1 200 20 219 219 381 98.0 1e-105 MLAFCRSSLKSKKYFIILLALAAIAGLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFR HAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSA GKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNHCLTYIAKNKRDATFKPDYLD GLVMHVEKGKVYLDGEFVNH >gi|299856437|gb|ADWV01000014.1| GENE 72 74646 - 75071 412 141 aa, chain - ## HITS:1 COG:yfaO KEGG:ns NR:ns ## COG: yfaO COG0494 # Protein_GI_number: 16130186 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli K12 # 1 141 1 141 141 282 98.0 1e-76 MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWALSGGGVESGERIEEALRREIREELGE QLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVSANREVKINEEFQDYAWVKPE DLVHYDLNVATRKTLRLKGLL >gi|299856437|gb|ADWV01000014.1| GENE 73 75384 - 75893 563 169 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_2404 NR:ns ## KEGG: EcSMS35_2404 # Name: not_defined # Def: outer membrane protein, YfaZ # Organism: E.coli_SECEC # Pathway: not_defined # 1 169 12 180 180 257 100.0 9e-68 MLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGDVAGVGLGLNLP LGPLMATVGGKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYSPDSLSSGIQSY EEANAGARYTIMRPVSIEAGYRYLNLSGKDGNRDNAVADGPYVGVNASF >gi|299856437|gb|ADWV01000014.1| GENE 74 75993 - 77195 1197 400 aa, chain + ## HITS:1 COG:yfaY KEGG:ns NR:ns ## COG: yfaY COG1058 # Protein_GI_number: 16130184 # Func_class: R General function prediction only # Function: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA # Organism: Escherichia coli K12 # 1 400 1 400 400 795 99.0 0 MLKVEMLSTGDEVLHGQIVDTNAAWLADFFFHQGLPLSRRNTVGDNLDDLVTILRERSQH ADVLIVNGGLGPTSDDLSALAAATAKGEGLVLHEAWLKEMERYFHERGRVMAPSNRKQAE LPASAEFINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVMVEHEILPRLRERFSLPQPPV CLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPIIELKLTGPASEQQAMEKLWLDVK RVAGQSVIFEGTEGLPAQISRELQNRQFSLTLSEQFTGGLLALQLSRAGAPLLACEVVPS QEETLAQTAHWITERRANHFAGLALAVSGFENEHLNFALATPDGTFALRVRFSTTRYSLA IRQEVCAMMALNMLRRWLNGQDIASEHGWIEVIESMTLSV >gi|299856437|gb|ADWV01000014.1| GENE 75 77331 - 77720 369 129 aa, chain + ## HITS:1 COG:yfaU KEGG:ns NR:ns ## COG: yfaU COG3836 # Protein_GI_number: 16130180 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Escherichia coli K12 # 1 129 139 267 267 257 100.0 3e-69 MAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRI IETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGK NGPRIKGSY >gi|299856437|gb|ADWV01000014.1| GENE 76 77761 - 78663 691 300 aa, chain - ## HITS:1 COG:ECs3129 KEGG:ns NR:ns ## COG: ECs3129 COG5464 # Protein_GI_number: 15832383 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 300 1 308 308 578 96.0 1e-165 MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAY YSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPL LFYHGETSPYPYSPNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQ KHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQK ERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH >gi|299856437|gb|ADWV01000014.1| GENE 77 78857 - 80047 1127 396 aa, chain - ## HITS:1 COG:ECs3128 KEGG:ns NR:ns ## COG: ECs3128 COG0247 # Protein_GI_number: 15832382 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 828 99.0 0 MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCK RCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKP VRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGK DLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIAT SSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCH MEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEES GADLVITDCETCKWQIEMSTSLRCEHPITLLAQALA >gi|299856437|gb|ADWV01000014.1| GENE 78 80044 - 81303 1084 419 aa, chain - ## HITS:1 COG:glpB KEGG:ns NR:ns ## COG: glpB COG3075 # Protein_GI_number: 16130177 # Func_class: E Amino acid transport and metabolism # Function: Anaerobic glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli K12 # 1 419 1 419 419 804 99.0 0 MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDI HSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLR ATWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLR NNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLP CSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADI PLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGV TTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ >gi|299856437|gb|ADWV01000014.1| GENE 79 81293 - 82921 1773 542 aa, chain - ## HITS:1 COG:ECs3126 KEGG:ns NR:ns ## COG: ECs3126 COG0578 # Protein_GI_number: 15832380 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 542 1 542 542 1051 100.0 0 MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARY AVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEA IDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIRE GATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRI NQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAP VMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRL MAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTP AWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAA GLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKD AL >gi|299856437|gb|ADWV01000014.1| GENE 80 83194 - 84552 1415 452 aa, chain + ## HITS:1 COG:glpT KEGG:ns NR:ns ## COG: glpT COG2271 # Protein_GI_number: 16130175 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Escherichia coli K12 # 1 452 1 452 452 884 99.0 0 MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGF SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSI AVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGM AWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELT AKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEY AGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFL IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVM IGGSILAVILLIVVMIGEKRRHEQLLQKRNGG >gi|299856437|gb|ADWV01000014.1| GENE 81 84557 - 85633 1205 358 aa, chain + ## HITS:1 COG:ECs3124 KEGG:ns NR:ns ## COG: ECs3124 COG0584 # Protein_GI_number: 15832378 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Escherichia coli O157:H7 # 1 358 1 358 358 717 99.0 0 MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGAD YLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEG FDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQ EGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTD WNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMV QDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE >gi|299856437|gb|ADWV01000014.1| GENE 82 86095 - 86745 516 216 aa, chain + ## HITS:1 COG:no KEGG:EcolC_1414 NR:ns ## KEGG: EcolC_1414 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ATCC8739 # Pathway: not_defined # 1 216 1 216 216 430 100.0 1e-119 MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYP FGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQH AVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR LRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM >gi|299856437|gb|ADWV01000014.1| GENE 83 86799 - 87053 184 84 aa, chain - ## HITS:1 COG:yfaE KEGG:ns NR:ns ## COG: yfaE COG0633 # Protein_GI_number: 16130171 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli K12 # 1 84 1 84 84 159 100.0 9e-40 MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEP LAFIQPGEILPCCCRAKGDIEIEM >gi|299856437|gb|ADWV01000014.1| GENE 84 87053 - 88183 1516 376 aa, chain - ## HITS:1 COG:ECs3118 KEGG:ns NR:ns ## COG: ECs3118 COG0208 # Protein_GI_number: 15832372 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Escherichia coli O157:H7 # 1 376 1 376 376 757 99.0 0 MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDR IDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHS RSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNG KTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEA LHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGL NKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVG QIDAEVDTDDLSNFQL >gi|299856437|gb|ADWV01000014.1| GENE 85 88272 - 90557 2821 761 aa, chain - ## HITS:1 COG:ECs3117 KEGG:ns NR:ns ## COG: ECs3117 COG0209 # Protein_GI_number: 15832371 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 761 1 761 761 1583 100.0 0 MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHE TIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLL EDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACL FSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINAT SSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSD VPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHC NTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEE LAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLT HKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIANEPLHYDWE ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYE HLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLT AYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI >gi|299856437|gb|ADWV01000014.1| GENE 86 91301 - 94987 2802 1228 aa, chain + ## HITS:1 COG:yfaL_2 KEGG:ns NR:ns ## COG: yfaL_2 COG3468 # Protein_GI_number: 16130168 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 789 1228 1 446 446 717 94.0 0 MIASLFSANGVAAAIDLCQGYDIKASCHASRQSLSGITQDWSVADGQWLVFSDMTNNASG GAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAG GYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYT STSYSDGDGGAIDVTDNNSDSKHPSGYTIINNTAFTNNTAEGYGGAIYTNSATAPYLIDI SVDDSYSQNGGVLVDENNSAAGYGDGPSTAAGGFMYLGLSEVTFDIADGKTLVIGNTEND GAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDP QDCYGLTIGSIDKYQNQAELNVGSTQQTFVHSLTGFQNGTLNIDAGGNVTVNQGSFAGTI EGAGQLTIAQNGSYVLSGAQSMALTGDIVVDDGAVLSLEGDAADLAALQDDPQSIVLNGG VLDLSDFSTWQSGTSYNDGLEVSGSSGMVIGSQDVVDLAGGNDMHIGGDGKDGVYVVVDA GDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITANVDT RSTTTEHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTFTKTGAGTLELTAS GTTQSAVRVEEGTLKGDVADIFPYASSLWVGDGATFVTGADQDIQSIDATSSGTIDISDG TVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLADVTVNGDLT NTSGAVSLQNGVAGDTLTVNGDYTGGGTLLFDSELNGDDSVSDQLVMNGNTAGNTTVVVN SITGIGEPTSTGIKVVDFAADPTQFQNNAQFCLAGSGYVNMGAYDYTLVEDNNDWYLRSQ EVTPPSPPDPDPDPTPDPDPTPDPIPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGG NGQTLNLRVIGGRYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGDDGEWMLGAVGGYSDNQ GESRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGTD HYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTR LGLHSEWRTAVGVTPTLDLNYYHDPHATEIEEDGSTISDDAVKQRGEIKVGVTGNISQRV SLRGSVAWQKGSDDFAQTAGFLSMTVKW >gi|299856437|gb|ADWV01000014.1| GENE 87 95115 - 95837 801 240 aa, chain - ## HITS:1 COG:ubiG KEGG:ns NR:ns ## COG: ubiG COG2227 # Protein_GI_number: 16130167 # Func_class: H Coenzyme transport and metabolism # Function: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase # Organism: Escherichia coli K12 # 1 240 1 240 240 499 99.0 1e-141 MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKV LDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHA GQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRM VPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPLTNTFKLGPGVDVNYMLHTQNK >gi|299856437|gb|ADWV01000014.1| GENE 88 95984 - 98611 3245 875 aa, chain + ## HITS:1 COG:gyrA KEGG:ns NR:ns ## COG: gyrA COG0188 # Protein_GI_number: 16130166 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Escherichia coli K12 # 1 875 1 875 875 1655 99.0 0 MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN KAYKKSARVVGDVIGKYHPHGDLAVYYTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRRE VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNV AAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE LLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVV VTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVY SMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVL TEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTG VRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERN GLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVA EPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE >gi|299856437|gb|ADWV01000014.1| GENE 89 98760 - 100448 1388 562 aa, chain + ## HITS:1 COG:yfaA KEGG:ns NR:ns ## COG: yfaA COG4685 # Protein_GI_number: 16130165 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 562 17 578 578 1113 98.0 0 MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDL FLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKL FSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKI NSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRW QASFGLEERAAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDES ASVDTSFDFTPVWNSMPAGASFCVVVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWY ADSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPISQTQQGEAQIWRRE VSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDETLVNNALQTLNKNRPAMV DVIPTDGIVPLYINPQGVAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYV MKLAQMEPGAAWQWLPITWQPL >gi|299856437|gb|ADWV01000014.1| GENE 90 100445 - 101068 315 207 aa, chain + ## HITS:1 COG:ECs3112 KEGG:ns NR:ns ## COG: ECs3112 COG3234 # Protein_GI_number: 15832366 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 207 10 216 216 422 99.0 1e-118 MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVR FAANETLKVHDSKWLKSNGFSSQYLPPEMTLTPGQRQLAQNWNQGNGKTGPYVTAINLIQ YNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLM TWKDTRWIPNDSNPNFIGIYRLNFLAR >gi|299856437|gb|ADWV01000014.1| GENE 91 101002 - 105606 3947 1534 aa, chain + ## HITS:1 COG:ECs3111 KEGG:ns NR:ns ## COG: ECs3111 COG2373 # Protein_GI_number: 15832365 # Func_class: R General function prediction only # Function: Large extracellular alpha-helical protein # Organism: Escherichia coli O157:H7 # 1 1534 1 1534 1534 2992 98.0 0 MDTQRFQSQFHWHLSFKFSGAIAACLSLSLVGTGLANADDSLPSSNYAPPAGGTFFLLAD SSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQY LGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELHLGNAIIKPSRYVQNNQ FSPLKKYPLVEQFRYPLWQAKPVEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLV EAMVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGV TDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRV DVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVDVTLDARNGGQGSFRLPENAVA GGYELCLAYRNQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVK NARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTV SASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWL RLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTV DIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQY EARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVE LTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQA LSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWR ITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVT KFAGAEMRQTLTLHKGANYISLAQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVE QQKNVMLGGGENALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPL SLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYAD WQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAI ARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQY AWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPP VVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNI PVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLP PGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGAVTFRHLLRFSQ KGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK >gi|299856437|gb|ADWV01000014.1| GENE 92 105607 - 107256 1131 549 aa, chain + ## HITS:1 COG:yfaQ KEGG:ns NR:ns ## COG: yfaQ COG5445 # Protein_GI_number: 16130163 # Func_class: S Function unknown # Function: Predicted secreted protein # Organism: Escherichia coli K12 # 1 549 1 549 549 1080 99.0 0 MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGS LWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHI GADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEA KIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLIRYATV LNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVKPGVLNGRYRVTFTNGNHITF ASHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANR EGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQAT AQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQGETGYN EPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIE TLTRQLLMD >gi|299856437|gb|ADWV01000014.1| GENE 93 107261 - 108037 588 258 aa, chain + ## HITS:1 COG:ECs3108 KEGG:ns NR:ns ## COG: ECs3108 COG4676 # Protein_GI_number: 15832362 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 516 99.0 1e-146 MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADD QNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRVESDGSFARPYIFTEGSNSVQVISP DGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGA LDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETF IVPMRNAGELTLVKSFDW >gi|299856437|gb|ADWV01000014.1| GENE 94 108360 - 111161 1919 933 aa, chain + ## HITS:1 COG:rcsC_1 KEGG:ns NR:ns ## COG: rcsC_1 COG0642 # Protein_GI_number: 16130155 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 700 1 700 700 1439 100.0 0 MFRALALVLWLLIAFSSVFYIVNALHQRESEIRQEFNLSSDQAQRFIQRTSDVMKELKYI AENRLSAENGVLSPRGRETQADVPAFEPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNF SAAYDLNRVFLIGSDNLCMANFGLRDMPVERDTALKALHERINKYRNAPQDDSGSNLYWI SEGPRPGVGYFYALTPVYLANRLQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLIS LTGPESKIKGDPRWMQERSWFGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLI LNAILLNVLAGAALFTLARMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTA DGVNILSNELAHTYLNMLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNE NVAICVLVDVSSRVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQ TKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANY LPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDY LSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDS EPGMGSQFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTY EGQEPTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLA RIYLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTAND GVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLE SGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES >gi|299856437|gb|ADWV01000014.1| GENE 95 111361 - 112011 854 216 aa, chain - ## HITS:1 COG:ECs3106 KEGG:ns NR:ns ## COG: ECs3106 COG2197 # Protein_GI_number: 15832360 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 400 100.0 1e-111 MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMP GDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKAL AALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK TISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD >gi|299856437|gb|ADWV01000014.1| GENE 96 112028 - 114700 2534 890 aa, chain - ## HITS:1 COG:ZyojN_1 KEGG:ns NR:ns ## COG: ZyojN_1 COG0642 # Protein_GI_number: 15802769 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 700 1 700 700 1280 99.0 0 MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAI QKRVDTWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDNS TLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLISTLPLKDLTSGFKESTVSDIVD SRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIP PGMPLDSFRLEPDTTATGDNDNEKEGTDSVSIHFNSTKIEISSALNSTDMRLVWQVPYGT LLLDTLQNILLPLLLNIGLLALALFGYTTFRHFSSRSTESLPNTAVNNELRILRAINEEI VSLLPLGLLVHDQESNRTVISNKIADHLLPHLNLQNITTMAEQHQGIIQATINNELYEIR MFRSQVAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRMTFMKNIGDALKEPAQSL AESAAKLNAPESKQLANQADVLVRLVDEIQLANMLADDSWKSETVLFSVQDLIDEVVPSV LPAIKRKGLQLLINNHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQDESS EDRLTFRILDTGEGVSIHEMDNLHFPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNI KTRDGLGTRYSVHIKMLAADPEVEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATC ITPDERLISQDYDIFLTDNPSNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVL QLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQT AHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL >gi|299856437|gb|ADWV01000014.1| GENE 97 115438 - 116544 1445 368 aa, chain + ## HITS:1 COG:ECs3104 KEGG:ns NR:ns ## COG: ECs3104 COG3203 # Protein_GI_number: 15832358 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli O157:H7 # 1 368 1 367 367 619 96.0 1e-177 MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLG FKGETQVTDQLTGYGQWEYQIQGGNSAENENNSWTRVAFAGLKFQDVGSFDYGRNYGVVY DVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGSVNG EGMTNNGRDALRQNGDGVGGSITYDYEGFGIGAAVSSSKRTDAQNTAAYIGNGDRAETYT GGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSVAYLQSKG KNLGTIAGRNYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIV ALGLVYQF >gi|299856437|gb|ADWV01000014.1| GENE 98 116656 - 117711 1304 351 aa, chain + ## HITS:1 COG:ECs3103 KEGG:ns NR:ns ## COG: ECs3103 COG1477 # Protein_GI_number: 15832357 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Escherichia coli O157:H7 # 1 351 1 351 351 692 98.0 0 MEISFTRVALLAAALFFVGCDQKPQPAKTHATEVTVLEGKTMGTFWRASIPGIDAKRSAE LKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEAMAEIVTTSLRIGAKTDGA MDITVGPLVNLWGFGPEQQPVQIPSQEQIDAMKAKTGLQHLTVINQSHQQYLQKDLPDLY IDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSRGMNGEGQPWRVAIQKPTDKENA VQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQTGRPIEHNLVSVTVIAPTALEADA WDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSFKTWMSPQFKSFLISEKN >gi|299856437|gb|ADWV01000014.1| GENE 99 117785 - 118849 640 354 aa, chain + ## HITS:1 COG:Zada_1 KEGG:ns NR:ns ## COG: Zada_1 COG2169 # Protein_GI_number: 15802766 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Escherichia coli O157:H7 EDL933 # 1 184 1 184 184 358 97.0 6e-99 MKKATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRARHALRENVSFYANASE ALAAGFRPCKRCQPDKANAQQHRLDKITHACRLLEQETPVTLEALADHVAMSPFHLHRLF KATTGMTPKAWQQAWRARRLRESLAKGESVTTSILNAGFPDSSSYYRKADESLGMTAKQF RHGGENLAVRYALADCELGRCLVAESERGICAILLGDDDATLISELQQMFPAADNAPADL TFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKP KAVRAVASACAANKLAIVIPCHRVVRGDGTLSGYRWGVSRKAQLLRREAENEER >gi|299856437|gb|ADWV01000014.1| GENE 100 118849 - 119499 531 216 aa, chain + ## HITS:1 COG:ECs3101 KEGG:ns NR:ns ## COG: ECs3101 COG3145 # Protein_GI_number: 15832355 # Func_class: L Replication, recombination and repair # Function: Alkylated DNA repair protein # Organism: Escherichia coli O157:H7 # 1 216 1 216 216 447 99.0 1e-126 MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVA MTNCGHLGWTSHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLIN RYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGG ESRLFYHGIQPLKAGFHPLTTDCRYNLTFRQAGKKE >gi|299856437|gb|ADWV01000014.1| GENE 101 119575 - 121218 195 547 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 326 541 133 357 398 79 30 6e-14 MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTSLLVLPEFLGLLLL LMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLAGLTSDVRNITI AFVRLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAITIWGGFVLVARVYKHMATLRE TEDKLYTDFQTVLEGRKELTLNRERAEYVFNNLYIPDAQEYRHHIIRADTFHLSAVNWSN IMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLTAQVAFNKLN KFALAPFKAEFPRPQAFPNWQTLELRNVTFSYQDNAFSVGPINLTIKRGELLFLIGGNGS GKSTLAMLLTGLYQPQSGEILLDGKPVSGEQPEDYRKLFSAVFTDVWLFDQLLGPEGKPA NPQLVEKWLAQLKMAHKLELSNGRIVNLKLSKGQKKRVALLLALAEERDIILLDEWAADQ DPHFRREFYQVLLPLMQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEERDAASR DAVARTA >gi|299856437|gb|ADWV01000014.1| GENE 102 121436 - 123082 1887 548 aa, chain + ## HITS:1 COG:ECs3099 KEGG:ns NR:ns ## COG: ECs3099 COG0579 # Protein_GI_number: 15832353 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli O157:H7 # 1 548 1 548 548 1073 99.0 0 MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSATLGTYLRELEPEWSMT MVERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISIEKAVAINEAFQISRQFWA HQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAALQQSSLFRGMRYSEDHAQIKE WAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIASLQKKSNFSLQLSSEVRALKRND DNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLLQESGIPEAKDYAGFPVGGQFLVSE NPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLDGKRVVLFGPFATFSTKFLKNGSLWDL MSSTTTSNVMPMMHVGLDNFDLVKYLVSQVMLSEEDRFEALKEYYPQAKKEDWRLWQAGQ RVQIIKRDAEKGGVLRLGTEVVSDQQGTIAALLGASPGASTAAPIMLDLLEKVFGDRVSS PQWQATLKAIVPSYGRKLNCDVAATERELQYTSEVLGLKYDKPQAADSTPKPQLKPQPVQ KEVADIAL >gi|299856437|gb|ADWV01000014.1| GENE 103 123231 - 123719 546 162 aa, chain - ## HITS:1 COG:eco KEGG:ns NR:ns ## COG: eco COG4574 # Protein_GI_number: 16130146 # Func_class: R General function prediction only # Function: Serine protease inhibitor ecotin # Organism: Escherichia coli K12 # 1 162 1 162 162 320 99.0 9e-88 MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQVIQLTPQEDESTLKVEL LIGQTLEVDCNLHRLGGKLESKTLEGWGYDYYVFDKVSSPVSTMMACPDGKKEKKFVTAY LGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAVVR >gi|299856437|gb|ADWV01000014.1| GENE 104 124611 - 124874 339 87 aa, chain + ## HITS:1 COG:ECs3096 KEGG:ns NR:ns ## COG: ECs3096 COG3062 # Protein_GI_number: 15832350 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in formation of periplasmic nitrate reductase # Organism: Escherichia coli O157:H7 # 1 87 1 87 87 139 100.0 2e-33 MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTI ESVRNVEGVLAVSLVYHQQEEQGEETP >gi|299856437|gb|ADWV01000014.1| GENE 105 124871 - 126341 1775 490 aa, chain + ## HITS:1 COG:napA KEGG:ns NR:ns ## COG: napA COG0243 # Protein_GI_number: 16130143 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 490 1 490 828 1026 100.0 0 MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKAPCRFCGTGCGVLVGTQ QGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLLRMKNGKYDKEGEFTPITW DQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAASKLFKAGFRSNNIDPNARHCM ASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAEMHPILWSRITNRRLSNQNVTVA VLSTYQHRSFELADNGIIFTPQSDLVILNYIANYIIQNNAINQDFFSKHVNLRKGATDIG YGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVAEYTLEKTAEMTGVPKDQLEQLAQLYA DPNKKVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPFSLTGQPSACGTAREV GTFAHRLPADMVVTNEKHRDICEKKWNIPSGTIPAKIGLHAVAQDRALKDGKLNVYWTMC TNNMQAGPNI Prediction of potential genes in microbial genomes Time: Sun May 15 15:34:40 2011 Seq name: gi|299856436|gb|ADWV01000015.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont14.1, whole genome shotgun sequence Length of sequence - 118428 bp Number of predicted genes - 117, with homology - 116 Number of transcription units - 66, operones - 27 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 944 1279 ## COG0326 Molecular chaperone, HSP90 family - Prom 966 - 1025 3.8 - Term 1007 - 1052 9.0 2 2 Op 1 23/0.000 - CDS 1054 - 1659 601 ## COG0353 Recombinational DNA repair protein (RecF pathway) 3 2 Op 2 30/0.000 - CDS 1659 - 1988 227 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 - Term 2011 - 2039 1.6 4 2 Op 3 8/0.042 - CDS 2041 - 3972 1897 ## COG2812 DNA polymerase III, gamma/tau subunits - Prom 4009 - 4068 2.5 - Term 4013 - 4049 2.2 5 3 Tu 1 . - CDS 4101 - 4652 840 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 6 4 Tu 1 . - CDS 4805 - 5182 345 ## COG2832 Uncharacterized protein conserved in bacteria - Prom 5210 - 5269 4.0 + Prom 5169 - 5228 6.3 7 5 Op 1 . + CDS 5252 - 5779 572 ## COG3923 Primosomal replication protein N'' 8 5 Op 2 . + CDS 5793 - 5954 189 ## B21_00422 hypothetical protein + Term 6136 - 6169 4.1 - Term 5996 - 6032 2.4 9 6 Tu 1 . - CDS 6166 - 9528 3739 ## COG3264 Small-conductance mechanosensitive channel - Prom 9574 - 9633 3.6 10 7 Tu 1 . + CDS 9534 - 9725 61 ## gi|300919868|ref|ZP_07136335.1| conserved domain protein + Term 9912 - 9946 0.6 - Term 9613 - 9642 1.4 11 8 Tu 1 . - CDS 9656 - 10303 466 ## COG1309 Transcriptional regulator - Prom 10364 - 10423 5.0 + Prom 10307 - 10366 3.6 12 9 Op 1 27/0.000 + CDS 10445 - 11638 1188 ## COG0845 Membrane-fusion protein 13 9 Op 2 . + CDS 11661 - 14810 3451 ## COG0841 Cation/multidrug efflux pump + Term 14830 - 14857 1.5 14 10 Op 1 . + CDS 15356 - 15730 269 ## ECDH10B_0417 hypothetical protein 15 10 Op 2 . + CDS 15756 - 15974 151 ## UTI89_C0487 hemolysin expression-modulating protein + Term 16067 - 16107 -0.5 + Prom 15976 - 16035 5.8 16 11 Tu 1 . + CDS 16145 - 16696 408 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Prom 16717 - 16776 3.4 17 12 Tu 1 . + CDS 16812 - 17282 451 ## G2583_0570 hypothetical protein + Prom 17361 - 17420 4.6 18 13 Tu 1 . + CDS 17440 - 18996 1302 ## COG4943 Predicted signal transduction protein containing sensor and EAL domains + Term 19003 - 19050 -0.9 - Term 18884 - 18921 2.2 19 14 Tu 1 . - CDS 19038 - 19391 484 ## COG5507 Uncharacterized conserved protein - 5S_RRNA 19502 - 19615 100.0 # ECU82664 [D:55896..56009] # 4.5S ribosomal RNA # Escherichia coli # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. 20 15 Tu 1 . + CDS 19770 - 20081 305 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase + Term 20194 - 20230 2.7 - Term 20070 - 20101 4.1 21 16 Tu 1 . - CDS 20112 - 20684 454 ## COG3126 Uncharacterized protein conserved in bacteria - Prom 20743 - 20802 2.6 + Prom 20803 - 20862 2.9 22 17 Tu 1 . + CDS 20902 - 21762 768 ## COG1946 Acyl-CoA thioesterase + Term 21768 - 21805 6.1 - Term 21748 - 21802 12.8 23 18 Op 1 24/0.000 - CDS 21810 - 23096 1530 ## COG0004 Ammonia permease 24 18 Op 2 4/0.458 - CDS 23126 - 23464 498 ## COG0347 Nitrogen regulatory protein PII - Prom 23562 - 23621 4.8 - Term 23573 - 23608 4.5 25 19 Op 1 35/0.000 - CDS 23645 - 25426 225 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 26 19 Op 2 3/0.542 - CDS 25419 - 27191 205 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 27 19 Op 3 1/0.875 - CDS 27221 - 27679 398 ## COG1522 Transcriptional regulators - Prom 27710 - 27769 5.5 - Term 27787 - 27814 1.5 28 20 Tu 1 . - CDS 27832 - 28650 746 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 28681 - 28740 2.6 + Prom 28666 - 28725 3.0 29 21 Op 1 5/0.250 + CDS 28750 - 30450 925 ## COG4533 ABC-type uncharacterized transport system, periplasmic component + Term 30474 - 30502 -0.0 30 21 Op 2 . + CDS 30515 - 31210 685 ## COG0603 Predicted PP-loop superfamily ATPase 31 22 Op 1 5/0.250 - CDS 31262 - 31660 384 ## COG0824 Predicted thioesterase - Prom 31691 - 31750 2.7 32 22 Op 2 6/0.042 - CDS 31754 - 32125 602 ## COG1555 DNA uptake protein and related DNA-binding proteins - Prom 32172 - 32231 2.3 - Term 32195 - 32232 7.1 33 23 Tu 1 . - CDS 32276 - 34147 2311 ## COG0760 Parvulin-like peptidyl-prolyl isomerase - Prom 34269 - 34328 3.5 - Term 34272 - 34303 2.5 34 24 Op 1 16/0.000 - CDS 34339 - 34611 445 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 34667 - 34726 3.4 - Term 34746 - 34787 8.5 35 24 Op 2 18/0.000 - CDS 34820 - 37174 3136 ## COG0466 ATP-dependent Lon protease, bacterial type - Prom 37283 - 37342 5.1 - Term 37297 - 37327 1.1 36 24 Op 3 24/0.000 - CDS 37361 - 38635 238 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 37 24 Op 4 29/0.000 - CDS 38761 - 39384 650 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 39418 - 39477 5.2 - Term 39559 - 39596 6.0 38 24 Op 5 2/0.667 - CDS 39630 - 40928 1823 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) - Prom 41067 - 41126 6.0 - Term 41181 - 41219 6.2 39 25 Tu 1 . - CDS 41272 - 41589 257 ## COG0271 Stress-induced morphogen (activity unknown) - Prom 41638 - 41697 4.8 + Prom 41793 - 41852 3.4 40 26 Op 1 1/0.875 + CDS 41894 - 42472 706 ## COG3056 Uncharacterized lipoprotein 41 26 Op 2 5/0.250 + CDS 42516 - 43991 1411 ## COG0477 Permeases of the major facilitator superfamily + Prom 44349 - 44408 7.8 42 27 Op 1 25/0.000 + CDS 44451 - 45398 905 ## COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 43 27 Op 2 20/0.000 + CDS 45420 - 47411 2143 ## COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 44 27 Op 3 16/0.000 + CDS 47401 - 48015 670 ## COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 45 27 Op 4 7/0.042 + CDS 48015 - 48344 324 ## COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 46 27 Op 5 . + CDS 48359 - 49246 897 ## COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) + Term 49260 - 49299 3.2 + Prom 49264 - 49323 3.9 47 28 Op 1 . + CDS 49431 - 49742 276 ## ECB_00378 hypothetical protein 48 28 Op 2 . + CDS 49726 - 50268 315 ## SSON_0409 putative acetyltransferase + Term 50370 - 50411 5.3 49 29 Tu 1 . - CDS 50324 - 51229 484 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 51418 - 51477 5.8 + Prom 51458 - 51517 6.8 50 30 Tu 1 . + CDS 51667 - 53031 1568 ## COG0477 Permeases of the major facilitator superfamily + Term 53154 - 53181 -0.8 - Term 52999 - 53051 5.4 51 31 Tu 1 . - CDS 53159 - 53650 728 ## COG1666 Uncharacterized protein conserved in bacteria - Prom 53676 - 53735 2.8 + Prom 53636 - 53695 2.5 52 32 Op 1 4/0.458 + CDS 53818 - 54729 780 ## COG1893 Ketopantoate reductase 53 32 Op 2 . + CDS 54692 - 55282 716 ## COG0693 Putative intracellular protease/amidase 54 33 Tu 1 . - CDS 55336 - 56784 1718 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase - Prom 56979 - 57038 3.5 + Prom 56728 - 56787 3.1 55 34 Op 1 22/0.000 + CDS 56990 - 57232 387 ## COG1722 Exonuclease VII small subunit 56 34 Op 2 13/0.042 + CDS 57232 - 58131 912 ## COG0142 Geranylgeranyl pyrophosphate synthase 57 34 Op 3 3/0.542 + CDS 58156 - 60018 2028 ## COG1154 Deoxyxylulose-5-phosphate synthase 58 34 Op 4 . + CDS 60073 - 61047 1078 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 59 35 Op 1 12/0.042 - CDS 61101 - 61619 608 ## COG1267 Phosphatidylglycerophosphatase A and related proteins 60 35 Op 2 11/0.042 - CDS 61597 - 62574 1053 ## COG0611 Thiamine monophosphate kinase 61 35 Op 3 17/0.000 - CDS 62652 - 63071 531 ## COG0781 Transcription termination factor 62 35 Op 4 6/0.042 - CDS 63091 - 63561 622 ## COG0054 Riboflavin synthase beta-chain 63 35 Op 5 14/0.042 - CDS 63650 - 64753 884 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 64 35 Op 6 . - CDS 64757 - 65152 443 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains - Prom 65233 - 65292 4.9 + Prom 65273 - 65332 3.1 65 36 Tu 1 . + CDS 65357 - 65896 442 ## EcHS_A0483 hypothetical protein + Term 65903 - 65942 -0.6 + Prom 66058 - 66117 7.7 66 37 Tu 1 . + CDS 66195 - 67079 1130 ## COG3248 Nucleoside-binding outer membrane protein + Term 67083 - 67127 8.5 - Term 67076 - 67109 4.1 67 38 Tu 1 . - CDS 67256 - 67603 417 ## c0520 hypothetical protein - Prom 67651 - 67710 6.4 - Term 67671 - 67712 8.1 68 39 Op 1 31/0.000 - CDS 67732 - 68703 1066 ## COG0341 Preprotein translocase subunit SecF 69 39 Op 2 25/0.000 - CDS 68714 - 70528 2121 ## COG0342 Preprotein translocase subunit SecD 70 39 Op 3 15/0.000 - CDS 70589 - 70921 493 ## COG1862 Preprotein translocase subunit YajC 71 39 Op 4 17/0.000 - CDS 70944 - 72071 1065 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 72 39 Op 5 . - CDS 72127 - 73197 1115 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) - Prom 73223 - 73282 4.0 + Prom 73166 - 73225 1.9 73 40 Tu 1 . + CDS 73290 - 73871 472 ## COG3124 Uncharacterized protein conserved in bacteria - Term 73710 - 73752 -1.0 74 41 Tu 1 . - CDS 73876 - 75690 1563 ## COG0366 Glycosidases 75 42 Op 1 5/0.250 - CDS 75849 - 77222 1509 ## COG1113 Gamma-aminobutyrate permease and related permeases - Term 77241 - 77276 6.4 76 42 Op 2 4/0.458 - CDS 77298 - 78617 1575 ## COG1114 Branched-chain amino acid permeases - Prom 78766 - 78825 5.3 - Term 78962 - 78997 5.1 77 43 Op 1 40/0.000 - CDS 79024 - 80319 1179 ## COG0642 Signal transduction histidine kinase - Term 80336 - 80375 3.3 78 43 Op 2 . - CDS 80377 - 81066 655 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 81090 - 81149 5.2 + Prom 81066 - 81125 3.8 79 44 Op 1 28/0.000 + CDS 81256 - 82458 905 ## COG0420 DNA repair exonuclease 80 44 Op 2 2/0.667 + CDS 82455 - 85598 3121 ## COG0419 ATPase involved in DNA repair 81 44 Op 3 . + CDS 85640 - 86908 913 ## COG2814 Arabinose efflux permease + Term 87007 - 87056 2.2 - Term 86993 - 87042 6.0 82 45 Tu 1 . - CDS 87051 - 87959 296 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase - Prom 88048 - 88107 4.3 + Prom 87994 - 88053 4.1 83 46 Tu 1 . + CDS 88084 - 88995 1191 ## COG2974 DNA recombination-dependent growth factor C 84 47 Tu 1 . - CDS 89153 - 89326 117 ## SbBS512_E0310 hypothetical protein - Prom 89524 - 89583 8.7 - Term 89599 - 89635 3.0 85 48 Op 1 . - CDS 89642 - 89926 285 ## COG3123 Uncharacterized protein conserved in bacteria 86 48 Op 2 . - CDS 89998 - 90675 586 ## SSON_0366 hypothetical protein - Prom 90834 - 90893 11.1 87 49 Op 1 . - CDS 90933 - 91124 219 ## LF82_2523 uncharacterized protein YaiA 88 49 Op 2 1/0.875 - CDS 91174 - 91698 366 ## COG0703 Shikimate kinase - Prom 91749 - 91808 5.2 - Term 91783 - 91820 -0.4 89 50 Tu 1 . - CDS 91881 - 92339 432 ## COG1671 Uncharacterized protein conserved in bacteria - Prom 92430 - 92489 3.5 + Prom 92358 - 92417 4.3 90 51 Tu 1 . + CDS 92459 - 93268 933 ## COG0345 Pyrroline-5-carboxylate reductase + Term 93277 - 93329 11.3 91 52 Tu 1 . - CDS 93285 - 94385 632 ## COG2199 FOG: GGDEF domain - Prom 94413 - 94472 4.8 - Term 94444 - 94485 10.2 92 53 Tu 1 . - CDS 94502 - 94822 293 ## APECO1_1624 hypothetical protein - Term 94893 - 94935 11.1 93 54 Op 1 . - CDS 94941 - 96356 1323 ## COG1785 Alkaline phosphatase - Prom 96396 - 96455 5.8 94 54 Op 2 . - CDS 96457 - 96717 285 ## SSON_0357 hypothetical protein - Prom 96901 - 96960 8.0 + Prom 96902 - 96961 7.7 95 55 Tu 1 . + CDS 97180 - 98274 1164 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes + Term 98283 - 98320 5.1 - Term 98118 - 98160 0.9 96 56 Tu 1 . - CDS 98298 - 98510 351 ## UTI89_C0397 hypothetical protein - Prom 98590 - 98649 5.7 + Prom 98660 - 98719 3.8 97 57 Tu 1 . + CDS 98770 - 99078 302 ## APECO1_1629 hypothetical protein + Term 99083 - 99137 0.9 - Term 99070 - 99125 1.5 98 58 Op 1 . - CDS 99137 - 100231 1007 ## SDY_0368 hypothetical protein 99 58 Op 2 . - CDS 100244 - 101464 1354 ## COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components 100 58 Op 3 . - CDS 101484 - 101678 95 ## ECIAI1_0372 hypothetical protein - Prom 101762 - 101821 3.4 + Prom 101681 - 101740 3.9 101 59 Tu 1 . + CDS 101816 - 102973 1011 ## COG1680 Beta-lactamase class C and other penicillin binding proteins + Term 102983 - 103031 10.6 102 60 Op 1 . - CDS 102974 - 103597 299 ## ECUMN_0411 putative DNA-binding transcriptional regulator - Prom 103621 - 103680 1.9 103 60 Op 2 . - CDS 103685 - 106687 2907 ## COG3468 Type V secretory pathway, adhesin AidA + Prom 106452 - 106511 2.8 104 61 Tu 1 . + CDS 106645 - 106836 106 ## 105 62 Tu 1 . + CDS 107211 - 108185 1103 ## COG0113 Delta-aminolevulinic acid dehydratase 106 63 Op 1 5/0.250 - CDS 108291 - 109142 972 ## COG2175 Probable taurine catabolism dioxygenase 107 63 Op 2 7/0.042 - CDS 109139 - 109966 1066 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 108 63 Op 3 6/0.042 - CDS 109963 - 110730 271 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 109 63 Op 4 . - CDS 110743 - 111705 1150 ## COG4521 ABC-type taurine transport system, periplasmic component - Prom 111785 - 111844 4.6 110 64 Tu 1 . + CDS 111659 - 111883 93 ## EcE24377A_0388 hypothetical protein + Prom 112049 - 112108 7.9 111 65 Op 1 1/0.875 + CDS 112321 - 112992 375 ## COG2120 Uncharacterized proteins, LmbE homologs 112 65 Op 2 . + CDS 113002 - 114198 696 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 113 65 Op 3 . + CDS 114065 - 114757 431 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 114 65 Op 4 . + CDS 114759 - 115532 802 ## SSON_0337 hypothetical protein + Term 115643 - 115701 19.7 + Prom 115636 - 115695 6.1 115 66 Op 1 2/0.667 + CDS 115717 - 115992 220 ## COG1937 Uncharacterized protein conserved in bacteria 116 66 Op 2 12/0.042 + CDS 116027 - 117136 1334 ## COG1062 Zn-dependent alcohol dehydrogenases, class III + Term 117152 - 117184 2.2 117 66 Op 3 . + CDS 117229 - 118062 688 ## COG0627 Predicted esterase + Term 118295 - 118325 3.0 Predicted protein(s) >gi|299856436|gb|ADWV01000015.1| GENE 1 2 - 944 1279 314 aa, chain - ## HITS:1 COG:ECs0526 KEGG:ns NR:ns ## COG: ECs0526 COG0326 # Protein_GI_number: 15829780 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Escherichia coli O157:H7 # 1 314 1 314 624 613 100.0 1e-175 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGD GELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLI GQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDRGTEITLHL REGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDGETVISWEKINKAQALWTRNKSE ITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKHGLKLY VQRVFIMDDAEQFM >gi|299856436|gb|ADWV01000015.1| GENE 2 1054 - 1659 601 201 aa, chain - ## HITS:1 COG:ECs0525 KEGG:ns NR:ns ## COG: ECs0525 COG0353 # Protein_GI_number: 15829779 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 399 100.0 1e-111 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE LEMVDGTTLSHSLAGRHKIRF >gi|299856436|gb|ADWV01000015.1| GENE 3 1659 - 1988 227 109 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 5 109 9 114 114 92 41 1e-17 MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRVEIDPS LLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLPPGFKMPF >gi|299856436|gb|ADWV01000015.1| GENE 4 2041 - 3972 1897 643 aa, chain - ## HITS:1 COG:dnaX KEGG:ns NR:ns ## COG: dnaX COG2812 # Protein_GI_number: 16128454 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Escherichia coli K12 # 1 643 1 643 643 1118 100.0 0 MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ RVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKA TTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVA LNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPL EWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI >gi|299856436|gb|ADWV01000015.1| GENE 5 4101 - 4652 840 183 aa, chain - ## HITS:1 COG:apt KEGG:ns NR:ns ## COG: apt COG0503 # Protein_GI_number: 16128453 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Escherichia coli K12 # 1 183 1 183 183 349 100.0 1e-96 MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKV VGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGD KVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVPF PGH >gi|299856436|gb|ADWV01000015.1| GENE 6 4805 - 5182 345 125 aa, chain - ## HITS:1 COG:ECs0521 KEGG:ns NR:ns ## COG: ECs0521 COG2832 # Protein_GI_number: 15829775 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 125 1 125 125 198 99.0 2e-51 MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSPRFHAWLLYRSWFGSYL RFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPRVRIMLLVILACLLFYMWRIPVIDE KQEKH >gi|299856436|gb|ADWV01000015.1| GENE 7 5252 - 5779 572 175 aa, chain + ## HITS:1 COG:priC KEGG:ns NR:ns ## COG: priC COG3923 # Protein_GI_number: 16128451 # Func_class: L Replication, recombination and repair # Function: Primosomal replication protein N'' # Organism: Escherichia coli K12 # 1 175 1 175 175 244 99.0 8e-65 MKTALLLEKLEGQLATLRQRCAPVAQFATLSARFDRHLFQTRATTLQACLDEAGDNLAAL RHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAPPKIARWQRKRIQHQDFER RLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCRHALEKIENRLARLTR >gi|299856436|gb|ADWV01000015.1| GENE 8 5793 - 5954 189 53 aa, chain + ## HITS:1 COG:no KEGG:B21_00422 NR:ns ## KEGG: B21_00422 # Name: ybaM # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 53 1 53 53 72 100.0 3e-12 MSLENAPDDVKLAVDLIVLLEENQIPASTVLRALDIVKRDYEKKLTRDDEAEK >gi|299856436|gb|ADWV01000015.1| GENE 9 6166 - 9528 3739 1120 aa, chain - ## HITS:1 COG:ECs0518 KEGG:ns NR:ns ## COG: ECs0518 COG3264 # Protein_GI_number: 15829772 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 1120 1 1120 1120 2080 99.0 0 MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTKADLQAQLDSLNKQKDL SAQDKLVQQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKMRQATAALTALSDVDNDEE TRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVSLQTQPERVQNAMYNASQQLQ QIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQRKSLEGNTVLQDTLQKQRDYVT ANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPDEAARIQANPLVKQELEINQQLSQR LITATENGNQLMQQNIKVKNWLERALQSERNIKEQIAVLKGSLLLSRILYQQQQTLPSAD ELENMTNRIADLRLEQFEVNQQRDALFQSDAFVNKLEEGHTNEVNSEVHDALLQVVDMRR ELLDQLNKQLGNQLMMAINLQINQQQLMSVSKNLKSILTQQIFWVNSNRPMDWDWIKAFP QSLKDEFKSMKITVNWEKAWPAVFIAFLAGLPLLLIAGLIHWRLGWLKAYQQKLASAVGS LRNDSQLNTPKAILIDLIRALPVCLIILAVGLILLTMQLNISELLWSFSKKLAIFWLVFG LCWKVLEKNGVAVRHFGMPEQQTSHWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLG QAMIFFNLLLIAFLVWPMCRESWRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLR LSGRWIETVYLVIIWNLLYQTVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPT IALEQVNQQTLRITMLLMFALFGVMFWAIWSDLITVFSYLDSITLWHYNGTEAGAAVVKN VTMGSLLFAIIASMVAWALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMT VFGSLGVSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGT VSKIRIRATTITDFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRK VLLKAATEHPRVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCR ENDINIAFNQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG >gi|299856436|gb|ADWV01000015.1| GENE 10 9534 - 9725 61 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300919868|ref|ZP_07136335.1| ## NR: gi|300919868|ref|ZP_07136335.1| conserved domain protein [Escherichia coli MS 115-1] # 1 61 1 61 71 103 98.0 4e-21 MKVSEPEERPEKVKPQEYHDAVNQNSNDENVQEKSWSQIQGYSLVAGLRSVGHRRYISSK MAT >gi|299856436|gb|ADWV01000015.1| GENE 11 9656 - 10303 466 215 aa, chain - ## HITS:1 COG:acrR KEGG:ns NR:ns ## COG: acrR COG1309 # Protein_GI_number: 16128448 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 215 1 215 215 416 99.0 1e-116 MARKNKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFS EIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVTEERRRLLMEIIFHKCEFV GEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMTRRAAIIMRGYISGLMENWLF APQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE >gi|299856436|gb|ADWV01000015.1| GENE 12 10445 - 11638 1188 397 aa, chain + ## HITS:1 COG:ECs0516 KEGG:ns NR:ns ## COG: ECs0516 COG0845 # Protein_GI_number: 15829770 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 397 1 397 397 660 100.0 0 MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVTVKTEPLQITTELPGRT SAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAAN IAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPI SGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENG KAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEG LNPNAILVPQQGVTRTPRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVV ISGLQKVRPGVQVKAQEVTADNNQQAASGAQPEQSKS >gi|299856436|gb|ADWV01000015.1| GENE 13 11661 - 14810 3451 1049 aa, chain + ## HITS:1 COG:acrB KEGG:ns NR:ns ## COG: acrB COG0841 # Protein_GI_number: 16128446 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1049 1 1049 1049 2000 100.0 0 MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDT VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ EVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGS QYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL TSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANAL DTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM AEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL SVLVALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSTHHYTDSVGGILRSTGR YLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLT KEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKD AMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNG LEDTPQFKIDIDQEKAQALGVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYR MLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEA MELMEQLASKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFS VMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGL IEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIF FVPVFFVVVRRRFSRKNEDIEHSHTVDHH >gi|299856436|gb|ADWV01000015.1| GENE 14 15356 - 15730 269 124 aa, chain + ## HITS:1 COG:no KEGG:ECDH10B_0417 NR:ns ## KEGG: ECDH10B_0417 # Name: ybaJ # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 124 1 124 124 243 100.0 2e-63 MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGWVNDPTSAINLQLNELIEHIATFAL NYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRKSGNRLFRCFVNATKENPA SLSC >gi|299856436|gb|ADWV01000015.1| GENE 15 15756 - 15974 151 72 aa, chain + ## HITS:1 COG:no KEGG:UTI89_C0487 NR:ns ## KEGG: UTI89_C0487 # Name: hha # Def: hemolysin expression-modulating protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 72 5 76 76 130 100.0 1e-29 MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLY DKIPSSVWKFIR >gi|299856436|gb|ADWV01000015.1| GENE 16 16145 - 16696 408 183 aa, chain + ## HITS:1 COG:ylaD KEGG:ns NR:ns ## COG: ylaD COG0110 # Protein_GI_number: 16128443 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 1 183 1 183 183 381 100.0 1e-106 MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEA YIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVAR NSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARII KKL >gi|299856436|gb|ADWV01000015.1| GENE 17 16812 - 17282 451 156 aa, chain + ## HITS:1 COG:no KEGG:G2583_0570 NR:ns ## KEGG: G2583_0570 # Name: ylaC # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 156 14 169 169 304 100.0 8e-82 MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYVAFFATLAVMLQSETLS GSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGEWYNTRFVPAALVEAILNS PRVADVHKEQLQKMIVRKGELSFYDIFTLARAESTS >gi|299856436|gb|ADWV01000015.1| GENE 18 17440 - 18996 1302 518 aa, chain + ## HITS:1 COG:ECs0510 KEGG:ns NR:ns ## COG: ECs0510 COG4943 # Protein_GI_number: 15829764 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing sensor and EAL domains # Organism: Escherichia coli O157:H7 # 1 518 1 518 518 1040 99.0 0 MLVRTRHLVGLISGVLILSVLLPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQ GKDALQELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFP EPGKISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIG NAHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQKG WHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLANGK IVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQHPQQHI SINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISRYREAGHE IYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIE TSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL >gi|299856436|gb|ADWV01000015.1| GENE 19 19038 - 19391 484 117 aa, chain - ## HITS:1 COG:ECs0509 KEGG:ns NR:ns ## COG: ECs0509 COG5507 # Protein_GI_number: 15829763 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 117 1 117 117 210 99.0 4e-55 MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKA EENEEVVFSWIEYPSKEVRDAATQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE >gi|299856436|gb|ADWV01000015.1| GENE 20 19770 - 20081 305 103 aa, chain + ## HITS:1 COG:ECs0508 KEGG:ns NR:ns ## COG: ECs0508 COG3695 # Protein_GI_number: 15829762 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Escherichia coli O157:H7 # 1 103 27 129 129 202 100.0 8e-53 MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRV VNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWNY >gi|299856436|gb|ADWV01000015.1| GENE 21 20112 - 20684 454 190 aa, chain - ## HITS:1 COG:ECs0507 KEGG:ns NR:ns ## COG: ECs0507 COG3126 # Protein_GI_number: 15829761 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 190 1 190 190 235 99.0 5e-62 MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKV ALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFVLPFNPADVQPNARILLSA AITVNDKLVFITDTVQPVINKGGTKADLTLVPVQQTAVPVQASGGATTTVPSTSPTQVNP SSAVPAPTQY >gi|299856436|gb|ADWV01000015.1| GENE 22 20902 - 21762 768 286 aa, chain + ## HITS:1 COG:ECs0506 KEGG:ns NR:ns ## COG: ECs0506 COG1946 # Protein_GI_number: 15829760 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 557 100.0 1e-159 MSQALKNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQALYAAKETVPEERLVHSF HSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIFYMTASFQAPEAGFEHQKT MPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEVRPVEFHNPLKGHVAEPHRQV WIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIGFLEPGIQIATIDHSMWFHRPFN LNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNHN >gi|299856436|gb|ADWV01000015.1| GENE 23 21810 - 23096 1530 428 aa, chain - ## HITS:1 COG:ECs0505 KEGG:ns NR:ns ## COG: ECs0505 COG0004 # Protein_GI_number: 15829759 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Escherichia coli O157:H7 # 1 428 1 428 428 727 100.0 0 MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRG KNVLSMLTQVTVTFALVCILWVVYGYSLAFGEGNNFFGNINWLMLKNIELTAVMGSIYQY IHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTLSYIPIAHMVWGGGLLASHGA LDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAG SAGTANEIAALAFVNTVVATAAAILGWIFGEWALRGKPSLLGACSGAIAGLVGVTPACGY IGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFAASSLG GVGFAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLTVGLRVPEEQEREGLDVNS HGENAYNA >gi|299856436|gb|ADWV01000015.1| GENE 24 23126 - 23464 498 112 aa, chain - ## HITS:1 COG:ECs0504 KEGG:ns NR:ns ## COG: ECs0504 COG0347 # Protein_GI_number: 15829758 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 196 100.0 1e-50 MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVK IDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL >gi|299856436|gb|ADWV01000015.1| GENE 25 23645 - 25426 225 593 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 346 565 135 355 398 91 35 2e-17 MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPLLISYFIDNMVAKNNLP LKMVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAALRQPLSEFDTQP VGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAMFSLDWRMALVAIMIFPVVLV VMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQQFRQQARFGERMGEASRSHYMA RMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIE LTTQQAMLQQAVVAGERVFELMDGPRQQYGNDERPLQSGTIEVDNVSFAYRDDNLVLKNI NLSVPSRNFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSALRQGVAMV QQDPVVLADTFLANVTLGRDISEERVWQALETVQLAELARSMSDGIYTPLGEQGNNLSVG QKQLLALARVLVETPQILILDEATASIDSGTEQAIQHALAAVREHTTLVVIAHRLSTIVD ADTILVLHRGQAVEQGTHQQLLAAQGRYWQMYQLQLAGEELAASVREEESLSA >gi|299856436|gb|ADWV01000015.1| GENE 26 25419 - 27191 205 590 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 342 557 137 351 398 83 28 4e-15 MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVDGVTEQHFTTGQILMWI ATMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDYYRQLSRQHPEFYLRHRTGDLMARA TNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQLTLFALLPMPVMAIMIKRNGD ALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARI DARFDPTIYIAIGMANLLAIGGGSWMVAQGSLTLGQLTSFMMYLGLMIWPMLALAWMFNI VERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGELDVNIHQFTYPQTDHPALENVNFALK PGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPF LFSDTVANNIALGCPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQR ISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSALTEASEI IVMQHGHIAQRGNHDELAQQSGWYRDMYRYQQLEAALDDAPEIREEAVDA >gi|299856436|gb|ADWV01000015.1| GENE 27 27221 - 27679 398 152 aa, chain - ## HITS:1 COG:ybaO KEGG:ns NR:ns ## COG: ybaO COG1522 # Protein_GI_number: 16128432 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 152 30 181 181 308 100.0 2e-84 MLDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKI GLGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEF YKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE >gi|299856436|gb|ADWV01000015.1| GENE 28 27832 - 28650 746 272 aa, chain - ## HITS:1 COG:cof KEGG:ns NR:ns ## COG: cof COG0561 # Protein_GI_number: 16128431 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 1 272 5 276 276 553 99.0 1e-158 MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDA YLITGNGTRVHSLEGELLHCDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALL QAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCL EVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLGSVGSGFIMGNAMPQLRAEL PHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE >gi|299856436|gb|ADWV01000015.1| GENE 29 28750 - 30450 925 566 aa, chain + ## HITS:1 COG:ybaE KEGG:ns NR:ns ## COG: ybaE COG4533 # Protein_GI_number: 16128430 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli K12 # 1 566 1 566 566 1096 98.0 0 MRLLNRLNQYQRLWQPSAGKPQAVTVNELAERCFCSERHVRTLLRQAQEAGWLEWQAQSG RGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDT PTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNNTQRPIGDLAHHWETSTDGL RWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISAKRIEVTHPQCLTFFLHR PDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLKAVEYW ITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARK VISIIHQSGLLQTLEVGENLITASHALLPGWTIPQWQVPDEVKLPKTLTLVYHLPIELHT MAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPEYTLEQWLRCDP LWPHVFDAPAYAHLQSTLDAVQVMPDEENRFNALKAVFSQLMADATLTPLFNYHYRISAP PGVNGVRLTPRGWFEFTEAWLPAPSQ >gi|299856436|gb|ADWV01000015.1| GENE 30 30515 - 31210 685 231 aa, chain + ## HITS:1 COG:ybaX KEGG:ns NR:ns ## COG: ybaX COG0603 # Protein_GI_number: 16128429 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Escherichia coli K12 # 1 231 1 231 231 483 99.0 1e-136 MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARAHKV LDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQVKAEAVI TGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALADYYGKLDL VRNETLTCYNGIKGDGCGHCAACNLRANGLNHYLADKPTVMAAMKQKTGLR >gi|299856436|gb|ADWV01000015.1| GENE 31 31262 - 31660 384 132 aa, chain - ## HITS:1 COG:ybaW KEGG:ns NR:ns ## COG: ybaW COG0824 # Protein_GI_number: 16128428 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Escherichia coli K12 # 1 132 1 132 132 251 100.0 3e-67 MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWMTAHNIAFVVVNININY RRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADALITFVCIDLKTQKALALE GELREKLEQMVK >gi|299856436|gb|ADWV01000015.1| GENE 32 31754 - 32125 602 123 aa, chain - ## HITS:1 COG:ybaV KEGG:ns NR:ns ## COG: ybaV COG1555 # Protein_GI_number: 16128427 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Escherichia coli K12 # 1 123 1 123 123 179 99.0 1e-45 MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAAQSKAAVPAKASDEEGT RVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVEDLKQVPGMGNSLLERNLAV LTL >gi|299856436|gb|ADWV01000015.1| GENE 33 32276 - 34147 2311 623 aa, chain - ## HITS:1 COG:ybaU KEGG:ns NR:ns ## COG: ybaU COG0760 # Protein_GI_number: 16128426 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli K12 # 1 623 1 623 623 1104 99.0 0 MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAKVNDQEISRGQFENAFN SERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQA IFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGET DELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLDA ATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAK EKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAK VKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDTESLAGAEQAAGVKATQTGWFS KDNLPEELNFKPVADAIFNGGLVGENGAPGINSDIITVDGDRAFVLRISEHKPEAVKPLA DVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGAEAMQAAGLKFGEPKILSRSGRDPI SQAAFALPLPAKDKPSYGMATDMQGNVVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIV FEALMSNLRKEAKIKIGDALEQQ >gi|299856436|gb|ADWV01000015.1| GENE 34 34339 - 34611 445 90 aa, chain - ## HITS:1 COG:YPO3154 KEGG:ns NR:ns ## COG: YPO3154 COG0776 # Protein_GI_number: 16123316 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Yersinia pestis # 1 90 1 90 90 126 92.0 1e-29 MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG RNPQTGKEITIAAAKVPSFRAGKALKDAVN >gi|299856436|gb|ADWV01000015.1| GENE 35 34820 - 37174 3136 784 aa, chain - ## HITS:1 COG:lon KEGG:ns NR:ns ## COG: lon COG0466 # Protein_GI_number: 16128424 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Escherichia coli K12 # 1 784 1 784 784 1482 100.0 0 MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEAST DEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISALSDNGEHFSAKAEYLESP TIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLADTIAAHMPLKLADK QSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKE LGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQ VPWNARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGV GKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLF LLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMNIPAP LLDRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAG VRGLEREISKLCRKAVKQLLLDKSLKHIEINGDNLHDYLGVQRFDYGRADNENRVGQVTG LAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYE KRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLK EKLLAAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQV VTAK >gi|299856436|gb|ADWV01000015.1| GENE 36 37361 - 38635 238 424 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 159 386 250 432 466 96 31 6e-19 MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVAPHRE RSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGP TGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGI VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDT SKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDLIKFGL IPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAK KAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGKPEAQQ ASGE >gi|299856436|gb|ADWV01000015.1| GENE 37 38761 - 39384 650 207 aa, chain - ## HITS:1 COG:ECs0491 KEGG:ns NR:ns ## COG: ECs0491 COG0740 # Protein_GI_number: 15829745 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 417 100.0 1e-117 MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQ MLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAG AKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER DTERDRFLSAPEAVEYGLVDSILTHRN >gi|299856436|gb|ADWV01000015.1| GENE 38 39630 - 40928 1823 432 aa, chain - ## HITS:1 COG:ECs0490 KEGG:ns NR:ns ## COG: ECs0490 COG0544 # Protein_GI_number: 15829744 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Escherichia coli O157:H7 # 1 432 1 432 432 738 100.0 0 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA SVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGEDFTYSVEFEVYPEVELQGL EAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGG KASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKV EERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDI DVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNEL KADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEK ETTFNELMNQQA >gi|299856436|gb|ADWV01000015.1| GENE 39 41272 - 41589 257 105 aa, chain - ## HITS:1 COG:ECs0489 KEGG:ns NR:ns ## COG: ECs0489 COG0271 # Protein_GI_number: 15829743 # Func_class: T Signal transduction mechanisms # Function: Stress-induced morphogen (activity unknown) # Organism: Escherichia coli O157:H7 # 1 105 12 116 116 204 100.0 3e-53 MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRMI YSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAGSIA >gi|299856436|gb|ADWV01000015.1| GENE 40 41894 - 42472 706 192 aa, chain + ## HITS:1 COG:yajG KEGG:ns NR:ns ## COG: yajG COG3056 # Protein_GI_number: 16128419 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Escherichia coli K12 # 1 192 35 226 226 355 100.0 2e-98 MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALAK VTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVNLQIIVSQLYADVSQGNVR YNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNKNIADAVNSVLTDTIADMSQD TSIHEFIKQNAR >gi|299856436|gb|ADWV01000015.1| GENE 41 42516 - 43991 1411 491 aa, chain + ## HITS:1 COG:ECs0487 KEGG:ns NR:ns ## COG: ECs0487 COG0477 # Protein_GI_number: 15829741 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 491 1 491 491 841 99.0 0 MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYV FKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLEPGTQLRWMAALAVVIAFC SASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADKWLGWQGMYWLM AALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAF AMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQG ASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGTSAFVALLMTLCNKSFSATQFALLSAL AAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAAVPGLILLLVCRQTLEYTRVNDNFISRTE YPAGYAFAMWTLAAGVSLLAVWLLLLTMDALDLTHFSFLPALLEVGVLVALSGVVLGGLL DYLALRKTHLT >gi|299856436|gb|ADWV01000015.1| GENE 42 44451 - 45398 905 315 aa, chain + ## HITS:1 COG:cyoA KEGG:ns NR:ns ## COG: cyoA COG1622 # Protein_GI_number: 16128417 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 2 # Organism: Escherichia coli K12 # 1 315 1 315 315 627 99.0 1e-180 MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAIL MAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPL AHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLG SQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAEFDQWVAKAKQ SPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAH EGMEGMDMSHAESAH >gi|299856436|gb|ADWV01000015.1| GENE 43 45420 - 47411 2143 663 aa, chain + ## HITS:1 COG:ECs0485 KEGG:ns NR:ns ## COG: ECs0485 COG0843 # Protein_GI_number: 15829739 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 1 # Organism: Escherichia coli O157:H7 # 1 663 1 663 663 1241 100.0 0 MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYLWKEWLTSVDHKRLGIM YIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVI GLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIE YSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLII ASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSE IAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTG VKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHF HNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYALGFMGMT RRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLE WATSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFST IFGFAMIWHIWWLAIVGFAGMIITWIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLK NGN >gi|299856436|gb|ADWV01000015.1| GENE 44 47401 - 48015 670 204 aa, chain + ## HITS:1 COG:cyoC KEGG:ns NR:ns ## COG: cyoC COG1845 # Protein_GI_number: 16128415 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 3 # Organism: Escherichia coli K12 # 1 204 1 204 204 368 100.0 1e-102 MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTG KDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWLALTWLFGAGFIGMEIYEF HHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCL SLFWHFLDVVWICVFTVVYLMGAM >gi|299856436|gb|ADWV01000015.1| GENE 45 48015 - 48344 324 109 aa, chain + ## HITS:1 COG:ECs0483 KEGG:ns NR:ns ## COG: ECs0483 COG3125 # Protein_GI_number: 15829737 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 4 # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 159 100.0 8e-40 MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPAVILGTILAMAVVQVLV HLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMMMH >gi|299856436|gb|ADWV01000015.1| GENE 46 48359 - 49246 897 295 aa, chain + ## HITS:1 COG:ECs0482 KEGG:ns NR:ns ## COG: ECs0482 COG0109 # Protein_GI_number: 15829736 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Polyprenyltransferase (cytochrome oxidase assembly factor) # Organism: Escherichia coli O157:H7 # 1 295 2 296 296 524 100.0 1e-148 MFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLVGVSLVVASGCVFNNYID RDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLWFGANPLACWLGVMGFVVYV GVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDSGAAILLAIFSLWQMPHSYAIA IFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAVATLMLSLGGYAGYKYLVVAAAVS VWWLGMALRGYKVADDRIWARKLFGFSIIAITALSVMMSVDFMVPDSHTLLAAVW >gi|299856436|gb|ADWV01000015.1| GENE 47 49431 - 49742 276 103 aa, chain + ## HITS:1 COG:no KEGG:ECB_00378 NR:ns ## KEGG: ECB_00378 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 103 23 125 125 167 100.0 9e-41 MPGKTATLPDVDKTLKNARVELKTSPDAKNKLREAAQAVGVDLSAFILSAAMERAESVLD NQRRRELSNQSWELMNQLIAEPAQPTLALKALMKRKNSDGRQA >gi|299856436|gb|ADWV01000015.1| GENE 48 49726 - 50268 315 180 aa, chain + ## HITS:1 COG:no KEGG:SSON_0409 NR:ns ## KEGG: SSON_0409 # Name: not_defined # Def: putative acetyltransferase # Organism: S.sonnei # Pathway: not_defined # 1 180 1 180 180 368 100.0 1e-101 MVDKHEEITLPIVLSCNYQSDITYPGQKQFDCGNPVIDKFVRASLKKSVRNSDCAAKALI DRQSGELIGICTFTAYSLEKQRVSGVLQGSQPSEIGVVRLVMLGVARKYQKRGFGQDLLC DFFEHVKIIHQALPIKGVYLDADPAAINFYARLGFVQLSATPNAFGAVPMFLAIQHILAA >gi|299856436|gb|ADWV01000015.1| GENE 49 50324 - 51229 484 301 aa, chain - ## HITS:1 COG:STM0437 KEGG:ns NR:ns ## COG: STM0437 COG0790 # Protein_GI_number: 16763818 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Salmonella typhimurium LT2 # 19 297 214 497 503 152 36.0 7e-37 MLIVSPSVVASEKAHELYDSIYGGKPAPDVINTLHKMAESGDIDAQSLLGWEYYQPRYDT KPDVQEAIKWFELAAKQGDREAPLALGGIYYDGEQVRVDYAKAYALFNQAAQHGGNLAWS RLGIMYANGQYVEVDCKKAKEYLDKGVHIYGGPEDFLATCRKDMIDRKTVDDTLPVITVT RSGMRDNFLDKGFSCMDSLFATTNKLGEVANLRVTFSIRRPSGKEINQTVGFAPFGLNRL NISFTDYLFGSFTSNSSLILYKPEFERKSCATVRTTIVAATATINGKDVELLKAGAIEQK W >gi|299856436|gb|ADWV01000015.1| GENE 50 51667 - 53031 1568 454 aa, chain + ## HITS:1 COG:yajR KEGG:ns NR:ns ## COG: yajR COG0477 # Protein_GI_number: 16128412 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 454 3 456 456 811 99.0 0 MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLT QAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGAIAAAV MALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIA LTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLA DAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQT QFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGW IDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPADIAANEALKVRLLETEG IKEVLIAEEEHSAYVKIDSKVTNRFEIEQAIRQA >gi|299856436|gb|ADWV01000015.1| GENE 51 53159 - 53650 728 163 aa, chain - ## HITS:1 COG:ECs0480 KEGG:ns NR:ns ## COG: ECs0480 COG1666 # Protein_GI_number: 15829734 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 163 7 169 169 280 100.0 7e-76 MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDASKTIKVLSESDFQVNQ LLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGIESATQKKIVKMIKDSKLK VQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKNFRD >gi|299856436|gb|ADWV01000015.1| GENE 52 53818 - 54729 780 303 aa, chain + ## HITS:1 COG:apbA KEGG:ns NR:ns ## COG: apbA COG1893 # Protein_GI_number: 16128410 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Escherichia coli K12 # 1 303 1 303 303 622 99.0 1e-178 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDF LATSDLLLVTLKAWQVYDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTH AARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVN CVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAE NISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEMVKRKESEYERIGTGLP RPW >gi|299856436|gb|ADWV01000015.1| GENE 53 54692 - 55282 716 196 aa, chain + ## HITS:1 COG:ECs0478 KEGG:ns NR:ns ## COG: ECs0478 COG0693 # Protein_GI_number: 15829732 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli O157:H7 # 1 196 3 198 198 382 99.0 1e-106 MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLV EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFP IGNMTGFPTLKDKIPAEQWQDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHE VASQLVMAAGIYNYYE >gi|299856436|gb|ADWV01000015.1| GENE 54 55336 - 56784 1718 482 aa, chain - ## HITS:1 COG:ECs0477_1 KEGG:ns NR:ns ## COG: ECs0477_1 COG0301 # Protein_GI_number: 15829731 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 402 1 402 402 791 99.0 0 MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDENQR LAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFS SIDVERYVGGGLNQHIESARVKLTNPEVTVHLEVEDDRLLLIKGRYEGIGGFPIGTQEDV LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV AINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN LRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAVKSKI EAEEEKFDFSILDKVVEEANNVDIREIAQQTEQEVVEVETVNGFGPNDVILDIRSIDEQE DKPLKVEGIDVVSLPFYKLSTKFGDLDQNRTWLLWCERGVMSRLQALYLREQGFNNVKVY RP >gi|299856436|gb|ADWV01000015.1| GENE 55 56990 - 57232 387 80 aa, chain + ## HITS:1 COG:ECs0476 KEGG:ns NR:ns ## COG: ECs0476 COG1722 # Protein_GI_number: 15829730 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Escherichia coli O157:H7 # 1 80 1 80 80 112 100.0 1e-25 MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQAKLQQAEQRV QILLSDNEDASLTPFTPDNE >gi|299856436|gb|ADWV01000015.1| GENE 56 57232 - 58131 912 299 aa, chain + ## HITS:1 COG:ispA KEGG:ns NR:ns ## COG: ispA COG0142 # Protein_GI_number: 16128406 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Escherichia coli K12 # 1 299 1 299 299 534 99.0 1e-152 MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFG VSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL AFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRH KTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQG ADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK >gi|299856436|gb|ADWV01000015.1| GENE 57 58156 - 60018 2028 620 aa, chain + ## HITS:1 COG:dxs KEGG:ns NR:ns ## COG: dxs COG1154 # Protein_GI_number: 16128405 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Escherichia coli K12 # 1 620 1 620 620 1264 99.0 0 MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELT VALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSV GHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVVLND NEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMVVPG TLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQFLHIMTKKGRGYEPAEKDPITFHA VPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFP DRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDR AGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGN AVGVELTPLEKLPIGKGIVKRRGEKLAILNFGTLMPDAAKVAESLNATLVDMRFVKPLDE ALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEM RAELGLGAAGMEAKIKAWLA >gi|299856436|gb|ADWV01000015.1| GENE 58 60073 - 61047 1078 324 aa, chain + ## HITS:1 COG:yajO KEGG:ns NR:ns ## COG: yajO COG0667 # Protein_GI_number: 16128404 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 324 25 348 348 656 99.0 0 MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANS YSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDY VDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFV SMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLY KESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVD ITLKPEQIAELETPYKPHAVVGFK >gi|299856436|gb|ADWV01000015.1| GENE 59 61101 - 61619 608 172 aa, chain - ## HITS:1 COG:pgpA KEGG:ns NR:ns ## COG: pgpA COG1267 # Protein_GI_number: 16128403 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Escherichia coli K12 # 1 172 1 172 172 313 100.0 8e-86 MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLAAIPFWYLMTFLPWQLY SLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITLMALPTNDWQWVAAGFVIF RILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYFIGHHWPLGILS >gi|299856436|gb|ADWV01000015.1| GENE 60 61597 - 62574 1053 325 aa, chain - ## HITS:1 COG:thiL KEGG:ns NR:ns ## COG: thiL COG0611 # Protein_GI_number: 16128402 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Escherichia coli K12 # 1 325 1 325 325 637 99.0 0 MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAISTDTLVAGNHFLHDID PADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLESFSDSLFDLLNYYDMQLIG GDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGTPGDSAAGLAILQNRLQVADA KDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLISDLGHIVKASDCGARIDLALLP FSDALSRHVEPEQALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTADI EGLCFIRDGEPVTFDWKGYDHFATP >gi|299856436|gb|ADWV01000015.1| GENE 61 62652 - 63071 531 139 aa, chain - ## HITS:1 COG:ECs0469 KEGG:ns NR:ns ## COG: ECs0469 COG0781 # Protein_GI_number: 15829723 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Escherichia coli O157:H7 # 1 139 1 139 139 245 100.0 2e-65 MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTA YLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSH KFVNGVLDKAAPVIRPNKK >gi|299856436|gb|ADWV01000015.1| GENE 62 63091 - 63561 622 156 aa, chain - ## HITS:1 COG:ECs0468 KEGG:ns NR:ns ## COG: ECs0468 COG0054 # Protein_GI_number: 15829722 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 258 100.0 4e-69 MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQVKDENITVVWVPGAYEL PLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLAHVAQDSEIPVAFGVLTTE SIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA >gi|299856436|gb|ADWV01000015.1| GENE 63 63650 - 64753 884 367 aa, chain - ## HITS:1 COG:ribD_2 KEGG:ns NR:ns ## COG: ribD_2 COG1985 # Protein_GI_number: 16128399 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Escherichia coli K12 # 144 367 1 224 224 438 99.0 1e-123 MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAG EKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGI DVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDV QLLRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTP EHHIVQQPGETWFARTQEDSREWPETVRTLLIPEHKGHLDLVVLMMQLGKQQINSIWVEA GPTLAGALLQAGLVDELIVYIAPKLLGSDARGLCTLPGLEKLADAPQFKFKEIRHVGPDV CLHLVGA >gi|299856436|gb|ADWV01000015.1| GENE 64 64757 - 65152 443 131 aa, chain - ## HITS:1 COG:ECs0466 KEGG:ns NR:ns ## COG: ECs0466 COG1327 # Protein_GI_number: 15829720 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Escherichia coli O157:H7 # 1 131 19 149 149 231 99.0 2e-61 MGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRP VSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIK EFGEEIARLED >gi|299856436|gb|ADWV01000015.1| GENE 65 65357 - 65896 442 179 aa, chain + ## HITS:1 COG:no KEGG:EcHS_A0483 NR:ns ## KEGG: EcHS_A0483 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 179 21 199 199 295 100.0 6e-79 MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLNKETVKITQQNRLNAKS SSGVYLLPGAKTPARLESQIGTLRMSLVNITPDADGTTLTLRIQGESNDPLPAFSGTVEY GQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKGISVEQLDFVRIHDIQPVMQ >gi|299856436|gb|ADWV01000015.1| GENE 66 66195 - 67079 1130 294 aa, chain + ## HITS:1 COG:Ztsx KEGG:ns NR:ns ## COG: Ztsx COG3248 # Protein_GI_number: 15800140 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Nucleoside-binding outer membrane protein # Organism: Escherichia coli O157:H7 EDL933 # 1 294 1 294 294 523 99.0 1e-148 MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLE YEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEIEPRFSIDKLTNTDLSFGP FKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMSLSMNVYAKYQWQNYGAANEN EWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLGDDSGNAINGIKTRTNNSIASSH ILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGNFNVRSTGWGGYLVVGYNF >gi|299856436|gb|ADWV01000015.1| GENE 67 67256 - 67603 417 115 aa, chain - ## HITS:1 COG:no KEGG:c0520 NR:ns ## KEGG: c0520 # Name: yajD # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 115 24 138 138 236 100.0 2e-61 MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSN WELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK >gi|299856436|gb|ADWV01000015.1| GENE 68 67732 - 68703 1066 323 aa, chain - ## HITS:1 COG:ECs0460 KEGG:ns NR:ns ## COG: ECs0460 COG0341 # Protein_GI_number: 15829714 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Escherichia coli O157:H7 # 1 323 1 323 323 613 100.0 1e-175 MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEI TLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAEGETGGQVLGSQVLKVINE STNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHD VIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVS LTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLG MKREHMLQQKVEKEGADQPSILP >gi|299856436|gb|ADWV01000015.1| GENE 69 68714 - 70528 2121 604 aa, chain - ## HITS:1 COG:ECs0459 KEGG:ns NR:ns ## COG: ECs0459 COG0342 # Protein_GI_number: 15829713 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Escherichia coli O157:H7 # 1 604 12 615 615 1113 100.0 0 MLIVVIVIGLLYALPNLFGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEE GAILARFDSTDTQLRAREALMGVMGDKYVVALNLAPATPRWLAAIHAEPMKLGLDLRGGV HFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKENNYGLSITFRDAKARDEAIA YLSKRHPDLVISSQGSNQLRAVMSDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQ PVVLYKRVILTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVE YKDSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIA PIQIVEERTIGPTLGMQNIEQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIV GIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFS SIFDANITTLIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVK KLSI >gi|299856436|gb|ADWV01000015.1| GENE 70 70589 - 70921 493 110 aa, chain - ## HITS:1 COG:ECs0458 KEGG:ns NR:ns ## COG: ECs0458 COG1862 # Protein_GI_number: 15829712 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 201 100.0 4e-52 MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGD EVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL >gi|299856436|gb|ADWV01000015.1| GENE 71 70944 - 72071 1065 375 aa, chain - ## HITS:1 COG:ECs0457 KEGG:ns NR:ns ## COG: ECs0457 COG0343 # Protein_GI_number: 15829711 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Escherichia coli O157:H7 # 1 375 1 375 375 798 100.0 0 MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFH LWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIRKITEQGVHFRNPINGDPI FLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRERFDSLGNKN ALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVGEPKADMHRILEHVCPQIPADKP RYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKYKSDTGPLDP ECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAGLRKAIEEGKLESFVTD FYQRQGREVPPLNVD >gi|299856436|gb|ADWV01000015.1| GENE 72 72127 - 73197 1115 356 aa, chain - ## HITS:1 COG:ECs0456 KEGG:ns NR:ns ## COG: ECs0456 COG0809 # Protein_GI_number: 15829710 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Escherichia coli O157:H7 # 1 356 1 356 356 705 99.0 0 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNN TRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMT ARHGALFEVEFNDDRSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPT AGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAV LAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNF HLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE >gi|299856436|gb|ADWV01000015.1| GENE 73 73290 - 73871 472 193 aa, chain + ## HITS:1 COG:yajB KEGG:ns NR:ns ## COG: yajB COG3124 # Protein_GI_number: 16128389 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 193 1 193 193 351 99.0 5e-97 MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVRE AREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRF INLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQF YPRMMAQASHKAL >gi|299856436|gb|ADWV01000015.1| GENE 74 73876 - 75690 1563 604 aa, chain - ## HITS:1 COG:malZ KEGG:ns NR:ns ## COG: malZ COG0366 # Protein_GI_number: 16128388 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 604 2 605 605 1243 99.0 0 MLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVSMHKQRSQQQPG VTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWA ADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLD GISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLG MRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPK LDYQSESLVNEIYRGEDSIVRHWLKAPWSMDGWRLDVVHMLGEAGGARNNMQHVAGITEA AKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQT CMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIY YGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIALRKKSQALRHGGCQVLYAEDN VVVFVRVLNQQRVLVAINRGEACEVVLPASPLLNAVQWQCKEGHGQLTDGILALPAISAT VWMN >gi|299856436|gb|ADWV01000015.1| GENE 75 75849 - 77222 1509 457 aa, chain - ## HITS:1 COG:ECs0452 KEGG:ns NR:ns ## COG: ECs0452 COG1113 # Protein_GI_number: 15829706 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 457 1 457 457 783 100.0 0 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMR ALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPT VPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQ PTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP MRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINS DVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVI ASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVATTIGGLIFLLFIIGLIG YHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAENQ >gi|299856436|gb|ADWV01000015.1| GENE 76 77298 - 78617 1575 439 aa, chain - ## HITS:1 COG:ECs0451 KEGG:ns NR:ns ## COG: ECs0451 COG1114 # Protein_GI_number: 15829705 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Escherichia coli O157:H7 # 1 439 1 439 439 741 100.0 0 MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTV VALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSAL PLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEA YQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLT LLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTC ACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFT RSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMV VLAIIWDRAAGRQVTSSAH >gi|299856436|gb|ADWV01000015.1| GENE 77 79024 - 80319 1179 431 aa, chain - ## HITS:1 COG:phoR KEGG:ns NR:ns ## COG: phoR COG0642 # Protein_GI_number: 16128385 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 431 1 431 431 839 99.0 0 MLERLSWKRLVLELLLCCFPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVD RSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGI FWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVM PYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVRE KALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQT FTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPG IAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFV IPERLIAKNSD >gi|299856436|gb|ADWV01000015.1| GENE 78 80377 - 81066 655 229 aa, chain - ## HITS:1 COG:ECs0449 KEGG:ns NR:ns ## COG: ECs0449 COG0745 # Protein_GI_number: 15829703 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 229 1 229 229 446 99.0 1e-125 MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGS GIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVM RRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLL NHVWGTNVYVEDRTVDVHIRRLRKALEPGEHDRMVQTVRGTGYRFSTRF >gi|299856436|gb|ADWV01000015.1| GENE 79 81256 - 82458 905 400 aa, chain + ## HITS:1 COG:ECs0448 KEGG:ns NR:ns ## COG: ECs0448 COG0420 # Protein_GI_number: 15829702 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Escherichia coli O157:H7 # 1 400 1 400 400 803 100.0 0 MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDG TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVS QEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSEL SVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA >gi|299856436|gb|ADWV01000015.1| GENE 80 82455 - 85598 3121 1047 aa, chain + ## HITS:1 COG:ZsbcC KEGG:ns NR:ns ## COG: ZsbcC COG0419 # Protein_GI_number: 15800123 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Escherichia coli O157:H7 EDL933 # 1 1047 1 1047 1047 1485 99.0 0 MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE IYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLLTAQQ QEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA EHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQ WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAE QRPLRQRLVALHGQIVPQQKRLAQLMVTIQNVTLEQTQRNAALNEMRQRYKEKTQQLADV KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK KLGEEGATLRGQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQP WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE DEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHSEETVALENWR QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT QLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRE NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK ERIPVQIKVKKINGLGYSKLESTFAVK >gi|299856436|gb|ADWV01000015.1| GENE 81 85640 - 86908 913 422 aa, chain + ## HITS:1 COG:ECs0446 KEGG:ns NR:ns ## COG: ECs0446 COG2814 # Protein_GI_number: 15829700 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli O157:H7 # 29 422 1 394 394 630 99.0 1e-180 MALLVVILQAITLLATVIGSRSGGCDGGMKKVILSLALGTFGLGMAEFGIMGVLTELAHN VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYL MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ EFSWRYTFLLIAVFNIAVMASVYFWVPDIRDEAKGKLREQFHFLRSPAPWLIFAATMFGN AGVFAWFSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTD FIIVLALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIA FNLGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKP LG >gi|299856436|gb|ADWV01000015.1| GENE 82 87051 - 87959 296 302 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 3 298 6 316 319 118 31 1e-25 MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTV GMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAA GAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWMDEDELRYREEVPCYCGK QGCIETFISGTGFATDYRRLSGHALKGSEIISLVEESDPVAELALRRYELRLAKSLAHVV NILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVRKAKHGDSSGVRGAAWLWP QE >gi|299856436|gb|ADWV01000015.1| GENE 83 88084 - 88995 1191 303 aa, chain + ## HITS:1 COG:rdgC KEGG:ns NR:ns ## COG: rdgC COG2974 # Protein_GI_number: 16128378 # Func_class: L Replication, recombination and repair # Function: DNA recombination-dependent growth factor C # Organism: Escherichia coli K12 # 1 303 1 303 303 572 100.0 1e-163 MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVA NGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAF SRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWV RSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRI QFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGE AQR >gi|299856436|gb|ADWV01000015.1| GENE 84 89153 - 89326 117 57 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E0310 NR:ns ## KEGG: SbBS512_E0310 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 57 37 93 93 100 100.0 2e-20 MNNPQLAADVKTTWLKEDPSLLLFVEQPDLSLLRDLVKTGAMRKIRSEARHWLEEKQ >gi|299856436|gb|ADWV01000015.1| GENE 85 89642 - 89926 285 94 aa, chain - ## HITS:1 COG:ECs0441 KEGG:ns NR:ns ## COG: ECs0441 COG3123 # Protein_GI_number: 15829695 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 94 1 94 94 175 100.0 2e-44 MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEEMTVISGALNVLLPDAT DWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL >gi|299856436|gb|ADWV01000015.1| GENE 86 89998 - 90675 586 225 aa, chain - ## HITS:1 COG:no KEGG:SSON_0366 NR:ns ## KEGG: SSON_0366 # Name: aroM # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 225 1 225 225 401 100.0 1e-110 MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILT LLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANISSMTARNTIFLEPSRILP PLVSSIVEDHQVGVIVPVEEMLTVQAQKWQILQKSPVFSLGNPIHDSEQKIIDAGKELLA KGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIARLAAELLV >gi|299856436|gb|ADWV01000015.1| GENE 87 90933 - 91124 219 63 aa, chain - ## HITS:1 COG:no KEGG:LF82_2523 NR:ns ## KEGG: LF82_2523 # Name: yaiA # Def: uncharacterized protein YaiA # Organism: E.coli_LF82 # Pathway: not_defined # 1 63 1 63 63 90 100.0 2e-17 MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDP DKE >gi|299856436|gb|ADWV01000015.1| GENE 88 91174 - 91698 366 174 aa, chain - ## HITS:1 COG:ECs0438 KEGG:ns NR:ns ## COG: ECs0438 COG0703 # Protein_GI_number: 15829692 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Escherichia coli O157:H7 # 1 174 1 174 174 333 100.0 7e-92 MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRAR ETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLR PTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC >gi|299856436|gb|ADWV01000015.1| GENE 89 91881 - 92339 432 152 aa, chain - ## HITS:1 COG:ECs0436 KEGG:ns NR:ns ## COG: ECs0436 COG1671 # Protein_GI_number: 15829691 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 152 41 192 192 291 100.0 2e-79 MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNE IVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGI QTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG >gi|299856436|gb|ADWV01000015.1| GENE 90 92459 - 93268 933 269 aa, chain + ## HITS:1 COG:proC KEGG:ns NR:ns ## COG: proC COG0345 # Protein_GI_number: 16128371 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Escherichia coli K12 # 1 269 1 269 269 489 100.0 1e-138 MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEV AQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMP NTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVF MFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAV RVLEEKGFRAAVIEAMTKCMEKSEKLSKS >gi|299856436|gb|ADWV01000015.1| GENE 91 93285 - 94385 632 366 aa, chain - ## HITS:1 COG:yaiC_2 KEGG:ns NR:ns ## COG: yaiC_2 COG2199 # Protein_GI_number: 16128370 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 196 366 1 171 171 353 99.0 4e-97 MNDENFFKKAAAHGEELPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPP PGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTA MLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVVYP LLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLL IIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESA ITAMLRVREGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRN RTEVAA >gi|299856436|gb|ADWV01000015.1| GENE 92 94502 - 94822 293 106 aa, chain - ## HITS:1 COG:no KEGG:APECO1_1624 NR:ns ## KEGG: APECO1_1624 # Name: psiF # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 106 7 112 112 161 100.0 5e-39 MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKN SKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKKAA >gi|299856436|gb|ADWV01000015.1| GENE 93 94941 - 96356 1323 471 aa, chain - ## HITS:1 COG:phoA KEGG:ns NR:ns ## COG: phoA COG1785 # Protein_GI_number: 16128368 # Func_class: P Inorganic ion transport and metabolism # Function: Alkaline phosphatase # Organism: Escherichia coli K12 # 1 471 24 494 494 869 99.0 0 MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGARRLTGDQTAALRDSLS DKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDY VTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAA LVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAG EWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGN IDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQ IGETVDLDEAVQRALEFAKKDGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVM VMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK >gi|299856436|gb|ADWV01000015.1| GENE 94 96457 - 96717 285 86 aa, chain - ## HITS:1 COG:no KEGG:SSON_0357 NR:ns ## KEGG: SSON_0357 # Name: yaiB # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 86 1 86 86 132 100.0 5e-30 MKNLIAELLFKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIDQVEGALYEVK PDASIPDDDTELLRDYVKKLLKHPRQ >gi|299856436|gb|ADWV01000015.1| GENE 95 97180 - 98274 1164 364 aa, chain + ## HITS:1 COG:ECs0431 KEGG:ns NR:ns ## COG: ECs0431 COG1181 # Protein_GI_number: 15829685 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Escherichia coli O157:H7 # 1 364 1 364 364 728 100.0 0 MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGIDKQGQWHVSDASNYLLN ADDPAHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVIFPIVHGTLGEDGSLQGML RVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGL PLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKVIVEQGIKGREIECAVLGNDNPQ ASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAPEINDKIRAIAVQAYQTLGCAGMAR VDVFLTPENEVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLIELALERHAADNAL KTTM >gi|299856436|gb|ADWV01000015.1| GENE 96 98298 - 98510 351 70 aa, chain - ## HITS:1 COG:no KEGG:UTI89_C0397 NR:ns ## KEGG: UTI89_C0397 # Name: yaiZ # Def: hypothetical protein # Organism: E.coli_UTI89 # Pathway: not_defined # 1 70 45 114 114 138 100.0 5e-32 MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVGLVTWVISFWLAGLIIR RRDEETENAQ >gi|299856436|gb|ADWV01000015.1| GENE 97 98770 - 99078 302 102 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1629 NR:ns ## KEGG: APECO1_1629 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 102 1 102 102 200 100.0 1e-50 MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNLLVHAPGVYERLMQVQE TGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ >gi|299856436|gb|ADWV01000015.1| GENE 98 99137 - 100231 1007 364 aa, chain - ## HITS:1 COG:no KEGG:SDY_0368 NR:ns ## KEGG: SDY_0368 # Name: yaiW # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 364 1 364 364 710 99.0 0 MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKDL ATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLV HTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPMGQTLFGSLNPVRTGGPMQVS IAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYA SRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTELATRKLAGKLGMSDSEIRRQLEKG DSFSFEETALYKKVYQLAEAKTGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRAR CMKQ >gi|299856436|gb|ADWV01000015.1| GENE 99 100244 - 101464 1354 406 aa, chain - ## HITS:1 COG:ECs0427 KEGG:ns NR:ns ## COG: ECs0427 COG1133 # Protein_GI_number: 15829681 # Func_class: I Lipid transport and metabolism # Function: ABC-type long-chain fatty acid transport system, fused permease and ATPase components # Organism: Escherichia coli O157:H7 # 1 406 1 406 406 753 99.0 0 MFKSFFPKPGTFFLSAFVWALIAVIFWQAGGGDWGARITGASGQIPISAARFWSLDFLIF YAYYIVCVGLFAFFWFIYSPHRWQYWSILGTALIIFVTWFLVEVGVAVNAWYAPFYDLIQ TALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVSHYVFRWRTAMNEYYMANWQQ LRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIAFLPVLVTLSAHVPELPIVGHIP YGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVEAAYRKELVYGEDDATRATPPTVRE LFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFGLFLLFPSIVAGTITLGLMTQITNVFG QVRGAFQYLINSWTTLVELMSIYKRLRSFEHELDGDKIQEVTHTLS >gi|299856436|gb|ADWV01000015.1| GENE 100 101484 - 101678 95 64 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0372 NR:ns ## KEGG: ECIAI1_0372 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 64 1 64 64 119 100.0 3e-26 MPAFVILRVLIRLCKQSLVCEIRRNNSYGQAGELSALLWVTMGGFIWLTLCSGHAVNTQQ LLKR >gi|299856436|gb|ADWV01000015.1| GENE 101 101816 - 102973 1011 385 aa, chain + ## HITS:1 COG:ECs0426 KEGG:ns NR:ns ## COG: ECs0426 COG1680 # Protein_GI_number: 15829680 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Escherichia coli O157:H7 # 1 385 1 385 385 760 100.0 0 MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFYGSGATGMALVVIDGNQ RVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAPPGA RVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPTREQRWKYLSTAKLKAAPGSQ AAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMKDTTYTPSPDQCRRLMVAERGAS PCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQRSNQADRMQTLIYQRAQFTKVIGMD VPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGFITYMAMIPQKNIGAFVVVTRSPLTRF KNMSDGINDLVTELSGNKPLVIPAS >gi|299856436|gb|ADWV01000015.1| GENE 102 102974 - 103597 299 207 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_0411 NR:ns ## KEGG: ECUMN_0411 # Name: yaiV # Def: putative DNA-binding transcriptional regulator # Organism: E.coli_UMN026 # Pathway: not_defined # 1 207 16 222 222 418 100.0 1e-116 MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNSEDTFVILEGVISLRREENV LIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLA WQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEV LAALRKGGYIEMNKGKLVAINRLPSEY >gi|299856436|gb|ADWV01000015.1| GENE 103 103685 - 106687 2907 1000 aa, chain - ## HITS:1 COG:ECs0424_2 KEGG:ns NR:ns ## COG: ECs0424_2 COG3468 # Protein_GI_number: 15829678 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 532 1000 3 471 471 699 96.0 0 MHSWKKKLVVSQLALACTLAITSQANAATNDISGQTYNTFHHYNDATYADDVYYDGYVGW NNYAADSYYNGDIYPVINNATVNGVISTYYLDDGISTNTNANSLTIKNSTIHGMIYSECM TTDCADRADDYYHDRLALTVDNSTIDDNYEHYTYNGTYNNAADTHVVDVYNIGTAITLDQ EVDLSITNNSHVAGITLTQGYEWEDIDDNTVSTGVNSSEVFNNTITVKDSTVTSGSWTDE GTTGWFGNTGNASDYSGKSNFVTVDTDGDGVADSTIASWDDVALAVVAHPNTDNAMQTTA DFSNSTLMGDVIFSSNFDENFFPRGADSYRDADGEVDTNGWDGTDRLDLTLNNGSKWVGA AQSVHQTGSIDVDGDGKGDIATYGVGTEATATLIDIEDNSLWPLSTVGVENDDTSYSEFD HITGNQVYQSGLFNVTLNTGSQWDTTKTSLIDTLSINSGSTVNVADSTLISDSISLTGLS ALNINEDGHVATDSLTVDNSTVTISDEVSAGWAVGDAALYANNIKVTNDGILDVGNTAAN ALQVDTLNLTSTTDTSGNIHAGVFNIESNRFVLDADLTNDRTNDTTKSNYGYGLIAMNSD GHLTINGNGDNDNTASIEAGQNEVDNNGDHVAAATGNYKVRIDNATGAGSIADYNGNELI YVNDKNSNATFSAANKADLGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNL EQDTVGTRLTNSRHGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKIDGNNA KWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATM SNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSISGLFQSGDDYQLSNDMKVDGQ SYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNDNDVNGDSIDNGTEGSAVRV GLGTQFSFTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW >gi|299856436|gb|ADWV01000015.1| GENE 104 106645 - 106836 106 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLIVILQVSFSRSAFVIPPQGRNKLIHQLSMHRKHIMFRANDYAALQTNGSIILSPKSEC GHI >gi|299856436|gb|ADWV01000015.1| GENE 105 107211 - 108185 1103 324 aa, chain + ## HITS:1 COG:ECs0423 KEGG:ns NR:ns ## COG: ECs0423 COG0113 # Protein_GI_number: 15829677 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Escherichia coli O157:H7 # 1 324 12 335 335 620 100.0 1e-178 MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKH LAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTC FCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALD AAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQG ADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGS IKRAGADLIFSYFALDLAEKKILR >gi|299856436|gb|ADWV01000015.1| GENE 106 108291 - 109142 972 283 aa, chain - ## HITS:1 COG:ECs0422 KEGG:ns NR:ns ## COG: ECs0422 COG2175 # Protein_GI_number: 15829676 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Probable taurine catabolism dioxygenase # Organism: Escherichia coli O157:H7 # 1 283 1 283 283 565 99.0 1e-161 MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQTITPQQQRAL AQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELP STGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRWREAVAK NPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLGFLFAHITKPEFQVRWRW QPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKPFYRAG >gi|299856436|gb|ADWV01000015.1| GENE 107 109139 - 109966 1066 275 aa, chain - ## HITS:1 COG:ECs0421 KEGG:ns NR:ns ## COG: ECs0421 COG0600 # Protein_GI_number: 15829675 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Escherichia coli O157:H7 # 1 275 1 275 275 419 99.0 1e-117 MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAALQLISPLFLPPPQQVLA KLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVGIAMGLSPTVRGILDPVIE LYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQSLG ASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATD VVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ >gi|299856436|gb|ADWV01000015.1| GENE 108 109963 - 110730 271 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 205 1 215 245 108 31 9e-23 MLQISHLYADYGGKPVLEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQL AGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEKMQRLEIAHQMLKKVGLEG AEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQETGK QVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFARRFVAGESSRSIKSDPQFIAMR EYVLSRVFEQREAFS >gi|299856436|gb|ADWV01000015.1| GENE 109 110743 - 111705 1150 320 aa, chain - ## HITS:1 COG:tauA KEGG:ns NR:ns ## COG: tauA COG4521 # Protein_GI_number: 16128350 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type taurine transport system, periplasmic component # Organism: Escherichia coli K12 # 1 320 20 339 339 584 99.0 1e-167 MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNTFAKESGATVDWRKFDS GASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDL IGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAV NALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPD AWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTVELTGPVNKAIIDTAQFLKEQ GKVPAVANDYSQYVTSRFVQ >gi|299856436|gb|ADWV01000015.1| GENE 110 111659 - 111883 93 74 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_0388 NR:ns ## KEGG: EcE24377A_0388 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 74 1 74 74 135 100.0 3e-31 MNASAARSVLRDEIAMIVCSPVLLCEQYSGIKTFIKRISRYRTDDFILSKKTAKERLNMQ LLRSNNWENYYTSF >gi|299856436|gb|ADWV01000015.1| GENE 111 112321 - 112992 375 223 aa, chain + ## HITS:1 COG:yaiS KEGG:ns NR:ns ## COG: yaiS COG2120 # Protein_GI_number: 16128349 # Func_class: S Function unknown # Function: Uncharacterized proteins, LmbE homologs # Organism: Escherichia coli K12 # 50 185 1 136 136 272 98.0 3e-73 MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKGIYIAAVVMTTGNSGID GIIDRHEESRNALKILGCHQTIHLNFADTRAHLQLNDMISALEDIIKNQIPSDVEIMRVY TMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLSFMPQVFESVKEEYFTVKLAAL KKHKSQERRDYMRHDRLRAVAQFRGQQVNSDLGEGFVIHKMIL >gi|299856436|gb|ADWV01000015.1| GENE 112 113002 - 114198 696 398 aa, chain + ## HITS:1 COG:yaiP KEGG:ns NR:ns ## COG: yaiP COG1215 # Protein_GI_number: 16128348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 398 1 398 398 801 99.0 0 MKTWIFICMSIAMLLWFLSTLRRKPSQKKGCIDAIIPAYNEGPCLAQSLDNLLRNPYFCR VICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALMNGLNYATCDQVFLSDADT YVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHIRATVKLPMIVMKRTLQQLLG GAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTLVANGYRIRQANRCIVYPQECNS PREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIFPMLLVVIYGVGIYLTTWFNEFITT GPHGVVLAMFPLIWIGVVCVIGAFSAWFHRCWLLVPLAPLSVVYVLLAYAIWIIYGLIAF FTGREPQRDKPTRYSALVEASTAYSQPSVTGTEKLSEA >gi|299856436|gb|ADWV01000015.1| GENE 113 114065 - 114757 431 230 aa, chain + ## HITS:1 COG:b0359 KEGG:ns NR:ns ## COG: b0359 COG0110 # Protein_GI_number: 16128344 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Escherichia coli K12 # 94 230 11 147 147 267 99.0 1e-71 MDLLPFLLDANLSATNPPAIPHWWKRQPLIPNLLSQELKNYLKLNVKEKNIQIADQVIID ETAGEVVIGANTRICHGAVIQGPVVIGANCLIGNYAFIRPGTIISNGVKIGFATEIKNAV IEAEATIGPQCFIADSVVANQAYLGAQVRTSNHRLDEQPVSVRTPEGIIATGCDKLGCYI GQRSRLGVQVIILPGRIISPNTQLGPRVIVERNLPAGTYSLRQELIRTGD >gi|299856436|gb|ADWV01000015.1| GENE 114 114759 - 115532 802 257 aa, chain + ## HITS:1 COG:no KEGG:SSON_0337 NR:ns ## KEGG: SSON_0337 # Name: yaiO # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 257 1 257 257 482 99.0 1e-135 MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAYAELVAKVENATLLFNL SQGRRDYESEHFNATRGQGAVWYKWNNWLTTRTGIAFADNTPVFARQDFRQDINLALLPK TLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTHYDSSDAGGSYSNMISVRLND PRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQRIQPLTEQLNLGLTAGKVWYDTP TDDYNGLQLAAHLTWKF >gi|299856436|gb|ADWV01000015.1| GENE 115 115717 - 115992 220 91 aa, chain + ## HITS:1 COG:ECs0412 KEGG:ns NR:ns ## COG: ECs0412 COG1937 # Protein_GI_number: 15829666 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 91 8 98 98 154 100.0 4e-38 MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAAVRGAANGLMAEVLESH IRETFDRNDCYSREVSQSVDDTIELVRAYLK >gi|299856436|gb|ADWV01000015.1| GENE 116 116027 - 117136 1334 369 aa, chain + ## HITS:1 COG:ECs0411 KEGG:ns NR:ns ## COG: ECs0411 COG1062 # Protein_GI_number: 15829665 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Escherichia coli O157:H7 # 1 369 1 369 369 727 100.0 0 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVL GHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPD GTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHN TAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPND YDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRP FQLVTGRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEG KSIRTVIRY >gi|299856436|gb|ADWV01000015.1| GENE 117 117229 - 118062 688 277 aa, chain + ## HITS:1 COG:yaiM KEGG:ns NR:ns ## COG: yaiM COG0627 # Protein_GI_number: 16128340 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli K12 # 1 277 1 277 277 561 97.0 1e-160 MELIEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAANEKLPVLYWLSGLTCNEQNFI TKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDY IRNELPDLVMQHFPATTRKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWG QQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEM NIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR Prediction of potential genes in microbial genomes Time: Sun May 15 15:36:15 2011 Seq name: gi|299856435|gb|ADWV01000016.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont15.1, whole genome shotgun sequence Length of sequence - 112620 bp Number of predicted genes - 108, with homology - 108 Number of transcription units - 63, operones - 22 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 2714 2433 ## COG0277 FAD/FMN-containing dehydrogenases 2 2 Tu 1 . + CDS 3102 - 4214 1347 ## COG0628 Predicted permease + Term 4222 - 4254 6.3 + Prom 4458 - 4517 6.3 3 3 Op 1 . + CDS 4643 - 4999 142 ## JW1679 conserved hypothetical protein + Prom 5017 - 5076 2.6 4 3 Op 2 21/0.000 + CDS 5099 - 6313 908 ## COG0477 Permeases of the major facilitator superfamily + Prom 6331 - 6390 3.2 5 3 Op 3 4/0.417 + CDS 6540 - 7805 861 ## COG0477 Permeases of the major facilitator superfamily 6 3 Op 4 8/0.042 + CDS 7817 - 8683 904 ## COG0169 Shikimate 5-dehydrogenase 7 3 Op 5 3/0.458 + CDS 8714 - 9472 886 ## COG0710 3-dehydroquinate dehydratase + Prom 9486 - 9545 3.6 8 4 Op 1 . + CDS 9616 - 11211 1565 ## COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase 9 4 Op 2 . + CDS 11225 - 12376 1441 ## COG1960 Acyl-CoA dehydrogenases + Term 12383 - 12427 8.2 - Term 12365 - 12417 6.0 10 5 Tu 1 . - CDS 12419 - 13330 630 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 13446 - 13505 6.5 + Prom 13475 - 13534 6.1 11 6 Op 1 29/0.000 + CDS 13646 - 14410 820 ## COG2086 Electron transfer flavoprotein, beta subunit 12 6 Op 2 9/0.042 + CDS 14430 - 15368 1025 ## COG2025 Electron transfer flavoprotein, alpha subunit 13 6 Op 3 12/0.000 + CDS 15424 - 16713 1144 ## COG0644 Dehydrogenases (flavoproteins) 14 6 Op 4 2/0.958 + CDS 16710 - 17003 334 ## COG2440 Ferredoxin-like protein + Term 17016 - 17050 5.0 15 7 Tu 1 . + CDS 17060 - 18706 1249 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 18732 - 18766 2.5 - Term 18720 - 18754 6.5 16 8 Tu 1 . - CDS 18763 - 21141 2857 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase - Prom 21358 - 21417 8.0 + Prom 21322 - 21381 10.0 17 9 Op 1 . + CDS 21555 - 22307 788 ## COG1806 Uncharacterized protein conserved in bacteria + Prom 22314 - 22373 3.5 18 9 Op 2 . + CDS 22464 - 23510 863 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase + Term 23516 - 23551 5.8 + Prom 23554 - 23613 3.9 19 10 Tu 1 . + CDS 23642 - 23833 152 ## COG4256 Hemin uptake protein 20 11 Op 1 4/0.417 - CDS 23837 - 25273 1163 ## COG0397 Uncharacterized conserved protein 21 11 Op 2 5/0.208 - CDS 25336 - 26049 162 ## COG2200 FOG: EAL domain - Prom 26185 - 26244 4.3 - Term 26244 - 26283 11.1 22 12 Op 1 4/0.417 - CDS 26296 - 26760 276 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 23 12 Op 2 5/0.208 - CDS 26838 - 27587 649 ## COG4138 ABC-type cobalamin transport system, ATPase component 24 12 Op 3 5/0.208 - CDS 27587 - 28138 526 ## COG0386 Glutathione peroxidase 25 12 Op 4 4/0.417 - CDS 28201 - 29181 922 ## COG4139 ABC-type cobalamin transport system, permease component - Prom 29207 - 29266 3.8 - Term 29236 - 29264 2.1 26 13 Op 1 13/0.000 - CDS 29282 - 29581 318 ## PROTEIN SUPPORTED gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 27 13 Op 2 40/0.000 - CDS 29586 - 31973 2783 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 28 13 Op 3 13/0.000 - CDS 31988 - 32971 1287 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit - Prom 33156 - 33215 5.0 - Term 33379 - 33410 2.1 29 13 Op 4 46/0.000 - CDS 33422 - 33778 578 ## PROTEIN SUPPORTED gi|15802128|ref|NP_288150.1| 50S ribosomal protein L20 30 13 Op 5 36/0.000 - CDS 33831 - 34043 358 ## PROTEIN SUPPORTED gi|110805473|ref|YP_688993.1| 50S ribosomal protein L35 - Term 34068 - 34107 8.2 31 13 Op 6 16/0.000 - CDS 34125 - 34604 665 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 32 13 Op 7 . - CDS 34671 - 36539 1874 ## COG0441 Threonyl-tRNA synthetase - Prom 36784 - 36843 7.1 + Prom 37020 - 37079 6.1 33 14 Tu 1 1/1.000 + CDS 37123 - 38238 100 ## COG0666 FOG: Ankyrin repeat + Prom 38293 - 38352 2.8 34 15 Tu 1 . + CDS 38377 - 39021 239 ## COG0666 FOG: Ankyrin repeat + Term 39240 - 39280 1.3 - Term 39312 - 39348 6.2 35 16 Tu 1 . - CDS 39357 - 40115 661 ## COG3137 Putative salt-induced outer membrane protein - Prom 40274 - 40333 12.1 + Prom 40259 - 40318 6.1 36 17 Tu 1 . + CDS 40402 - 41331 968 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 37 18 Tu 1 . + CDS 41432 - 41722 288 ## ECH74115_2442 hypothetical protein + Prom 41749 - 41808 3.4 38 19 Tu 1 . + CDS 41828 - 42688 862 ## COG3001 Fructosamine-3-kinase + Term 42706 - 42734 1.3 - Term 42694 - 42722 1.3 39 20 Tu 1 . - CDS 42729 - 43265 533 ## SDY_1819 hypothetical protein - Prom 43435 - 43494 3.3 + Prom 43297 - 43356 3.2 40 21 Tu 1 . + CDS 43412 - 44080 753 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 44082 - 44125 12.2 + Prom 44160 - 44219 4.5 41 22 Op 1 1/1.000 + CDS 44243 - 44545 280 ## COG1988 Predicted membrane-bound metal-dependent hydrolases 42 22 Op 2 1/1.000 + CDS 44559 - 44834 61 ## COG1988 Predicted membrane-bound metal-dependent hydrolases 43 23 Tu 1 . + CDS 44967 - 46358 1743 ## COG1823 Predicted Na+/dicarboxylate symporter + Term 46369 - 46413 8.6 44 24 Tu 1 . - CDS 46362 - 47165 140 ## JW1719 hypothetical protein - Prom 47287 - 47346 10.7 - Term 47273 - 47318 1.1 45 25 Tu 1 . - CDS 47454 - 47717 170 ## SSON_1427 cell division modulator - Prom 47873 - 47932 4.1 + Prom 47787 - 47846 2.8 46 26 Tu 1 . + CDS 47900 - 50161 2303 ## COG0753 Catalase + Term 50165 - 50215 13.6 - Term 50154 - 50200 13.3 47 27 Op 1 5/0.208 - CDS 50208 - 50966 684 ## COG3394 Uncharacterized protein conserved in bacteria 48 27 Op 2 4/0.417 - CDS 50979 - 52331 1563 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 49 28 Op 1 5/0.208 - CDS 52436 - 53275 782 ## COG2207 AraC-type DNA-binding domain-containing proteins 50 28 Op 2 13/0.000 - CDS 53286 - 53636 589 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 51 28 Op 3 10/0.042 - CDS 53687 - 55045 1642 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 55065 - 55124 4.4 - Term 55051 - 55084 1.4 52 28 Op 4 . - CDS 55130 - 55450 422 ## COG1440 Phosphotransferase system cellobiose-specific component IIB - Prom 55557 - 55616 4.7 - Term 55683 - 55718 4.5 53 29 Tu 1 . - CDS 55749 - 56087 442 ## ECIAI39_1315 DNA-binding transcriptional activator OsmE - Prom 56188 - 56247 2.6 54 30 Tu 1 . + CDS 56289 - 57116 915 ## COG0171 NAD synthase + Term 57155 - 57194 8.2 + Prom 57264 - 57323 3.9 55 31 Tu 1 . + CDS 57346 - 58233 539 ## COG0322 Nuclease subunit of the excinuclease complex 56 32 Tu 1 . - CDS 58193 - 58768 292 ## COG3758 Uncharacterized protein conserved in bacteria - Prom 58858 - 58917 2.5 - Term 58885 - 58946 12.0 57 33 Tu 1 . - CDS 58971 - 59456 622 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 59567 - 59626 5.5 - Term 59746 - 59779 5.4 58 34 Op 1 5/0.208 - CDS 59786 - 60754 796 ## COG2988 Succinylglutamate desuccinylase 59 34 Op 2 7/0.083 - CDS 60747 - 62090 1242 ## COG3724 Succinylarginine dihydrolase 60 34 Op 3 8/0.042 - CDS 62087 - 63565 1215 ## COG1012 NAD-dependent aldehyde dehydrogenases 61 34 Op 4 7/0.083 - CDS 63562 - 64596 1107 ## COG3138 Arginine/ornithine N-succinyltransferase beta subunit 62 34 Op 5 . - CDS 64593 - 65813 1356 ## COG4992 Ornithine/acetylornithine aminotransferase - Prom 66013 - 66072 9.7 + Prom 66002 - 66061 5.3 63 35 Tu 1 . + CDS 66247 - 67065 857 ## COG0708 Exonuclease III + Prom 67153 - 67212 3.5 64 36 Op 1 . + CDS 67232 - 67942 585 ## COG0398 Uncharacterized conserved protein 65 36 Op 2 . + CDS 67947 - 68624 849 ## EcSMS35_1439 hypothetical protein 66 36 Op 3 3/0.458 + CDS 68642 - 69346 605 ## COG0398 Uncharacterized conserved protein 67 36 Op 4 2/0.958 + CDS 69346 - 69894 451 ## COG2128 Uncharacterized conserved protein 68 36 Op 5 3/0.458 + CDS 69904 - 71070 1005 ## COG4134 ABC-type uncharacterized transport system, periplasmic component 69 36 Op 6 3/0.458 + CDS 71088 - 72578 1410 ## COG4135 ABC-type uncharacterized transport system, permease component 70 36 Op 7 1/1.000 + CDS 72578 - 73231 200 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 71 36 Op 8 . + CDS 73298 - 74605 1285 ## COG2897 Rhodanese-related sulfurtransferase - Term 74551 - 74577 -1.0 72 37 Tu 1 . - CDS 74614 - 75198 413 ## COG0558 Phosphatidylglycerophosphate synthase - Prom 75276 - 75335 4.6 + Prom 75235 - 75294 4.7 73 38 Tu 1 . + CDS 75321 - 75728 302 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 75440 - 75468 0.6 74 39 Tu 1 . - CDS 75694 - 75966 96 ## SDY_1515 hypothetical protein - Prom 76153 - 76212 2.7 + Prom 76078 - 76137 4.1 75 40 Tu 1 . + CDS 76202 - 77545 1568 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase - Term 77383 - 77412 -0.2 76 41 Tu 1 . - CDS 77662 - 78702 230 ## EC55989_1929 hypothetical protein - Prom 78727 - 78786 6.3 - Term 78743 - 78793 9.8 77 42 Op 1 5/0.208 - CDS 78830 - 80791 1958 ## COG0550 Topoisomerase IA 78 42 Op 2 6/0.125 - CDS 80796 - 81839 1193 ## COG0709 Selenophosphate synthase - Prom 81861 - 81920 2.2 79 43 Tu 1 . - CDS 81956 - 82507 597 ## COG0778 Nitroreductase - Prom 82533 - 82592 4.9 + Prom 82491 - 82550 3.4 80 44 Tu 1 . + CDS 82668 - 84524 1888 ## COG0616 Periplasmic serine proteases (ClpP class) + Term 84537 - 84573 7.2 + Prom 84607 - 84666 3.4 81 45 Op 1 2/0.958 + CDS 84691 - 85707 989 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 82 45 Op 2 . + CDS 85718 - 86359 589 ## COG1335 Amidases related to nicotinamidase + Term 86397 - 86445 -0.9 83 46 Op 1 3/0.458 - CDS 86520 - 86792 277 ## COG3139 Uncharacterized protein conserved in bacteria 84 46 Op 2 . - CDS 86834 - 87247 202 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase + Prom 87355 - 87414 6.2 85 47 Op 1 4/0.417 + CDS 87589 - 88584 1121 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 88611 - 88640 2.1 + Prom 88588 - 88647 3.5 86 47 Op 2 . + CDS 88668 - 89552 973 ## COG0676 Uncharacterized enzymes related to aldose 1-epimerase - Term 89460 - 89492 0.1 87 48 Op 1 3/0.458 - CDS 89603 - 90457 821 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Term 90483 - 90511 3.0 88 48 Op 2 . - CDS 90547 - 91293 906 ## COG3713 Outer membrane protein V - Prom 91467 - 91526 4.0 89 49 Op 1 12/0.000 + CDS 91729 - 93663 2109 ## COG2766 Putative Ser protein kinase 90 49 Op 2 4/0.417 + CDS 93776 - 95059 947 ## PROTEIN SUPPORTED gi|163739530|ref|ZP_02146940.1| 50S ribosomal protein L34 + Term 95065 - 95103 5.2 + Prom 95190 - 95249 4.8 91 50 Tu 1 5/0.208 + CDS 95338 - 96681 802 ## COG2199 FOG: GGDEF domain + Term 96699 - 96729 1.0 + Prom 96688 - 96747 2.7 92 51 Op 1 2/0.958 + CDS 96880 - 98352 1102 ## COG2199 FOG: GGDEF domain 93 51 Op 2 . + CDS 98395 - 98898 498 ## COG2606 Uncharacterized conserved protein + Term 99023 - 99070 4.2 + Prom 99014 - 99073 3.1 94 52 Tu 1 . + CDS 99173 - 99619 607 ## COG2707 Predicted membrane protein + Term 99638 - 99671 2.0 95 53 Tu 1 . - CDS 99576 - 100010 276 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 100071 - 100130 1.7 + Prom 100412 - 100471 3.4 96 54 Op 1 3/0.458 + CDS 100494 - 101675 603 ## COG2807 Cyanate permease 97 54 Op 2 . + CDS 101730 - 102077 451 ## COG3189 Uncharacterized conserved protein - Term 102015 - 102071 0.6 98 55 Tu 1 . - CDS 102099 - 102353 165 ## COG3042 Putative hemolysin - Prom 102378 - 102437 3.9 + Prom 102378 - 102437 4.9 99 56 Tu 1 . + CDS 102536 - 103561 744 ## COG2199 FOG: GGDEF domain + Term 103615 - 103653 2.0 - Term 103777 - 103814 6.3 100 57 Tu 1 . - CDS 103828 - 104076 337 ## COG2261 Predicted membrane protein - Prom 104119 - 104178 3.6 101 58 Tu 1 . - CDS 104303 - 105451 216 ## COG0675 Transposase and inactivated derivatives - Prom 105512 - 105571 5.3 - Term 106003 - 106034 4.1 102 59 Tu 1 . - CDS 106043 - 106711 734 ## ECIAI1_1426 putative lipoprotein - Prom 106796 - 106855 4.5 - Term 106794 - 106853 9.7 103 60 Op 1 4/0.417 - CDS 107014 - 107607 680 ## COG0500 SAM-dependent methyltransferases 104 60 Op 2 . - CDS 107604 - 108596 881 ## COG1275 Tellurite resistance protein and related permeases - Prom 108797 - 108856 4.5 + Prom 108580 - 108639 6.6 105 61 Tu 1 . + CDS 108720 - 109700 611 ## EcE24377A_1605 hypothetical protein 106 62 Op 1 1/1.000 - CDS 109695 - 110231 923 ## PROTEIN SUPPORTED gi|16129386|ref|NP_415944.1| ribosomal-protein-L7/L12-serine acetyltransferase - Term 110255 - 110283 1.3 107 62 Op 2 . - CDS 110294 - 110518 211 ## COG2841 Uncharacterized protein conserved in bacteria 108 63 Tu 1 . - CDS 110658 - 112277 1567 ## COG3131 Periplasmic glucans biosynthesis protein - Prom 112392 - 112451 3.9 Predicted protein(s) >gi|299856435|gb|ADWV01000016.1| GENE 1 2 - 2714 2433 904 aa, chain - ## HITS:1 COG:ydiJ_1 KEGG:ns NR:ns ## COG: ydiJ_1 COG0277 # Protein_GI_number: 16129643 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli K12 # 1 542 1 542 542 1117 99.0 0 MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTDNSIYQLLPDAVVFPRS TADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVDMSRHMNRIIEINPEEGWV RVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGV RAVLLGGDILDTQPLPVELAETLGKSNTTIGRIYNTVYQRCRQQRQLIIDNFPKLNRFLT GYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARLDITPLPKVRRLVNVKYDSFDSALR NAPFMVEARALSVETVDSKVLNLAREDIVWHSVSELITDVPDKEMLGLNIVEFAGDDEAL IDERVNALCVRLDELIASQQAGVIGWQVCRELAGVERIYAMRKKAVGLLGNAKGAAKPIP FAEDTCVPPEHLADYIAEFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEILMKQ ISDDVVALTAKYGGLLWGEHGKGFRAEYSPAFFGEELFAELRKVKAAFDPHNRLNPGKIC PPEGLDAPMMKVDAVKRGTFDRQIPIAVRQQWRGAMECNGNGLCFNFDARSPMCPSMKIT QNRIHSPKGRATLVREWLRLLADRGVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEY DFSHEVKEAMSGCLACKACSTQCPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYA PLMARAPKTFNFFINQPLVRKLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLESL NAEQKARTVLVVQDPFTSYYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRF AKTAKKTADFLNRMAKLGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASAL ESQP >gi|299856435|gb|ADWV01000016.1| GENE 2 3102 - 4214 1347 370 aa, chain + ## HITS:1 COG:ECs2395 KEGG:ns NR:ns ## COG: ECs2395 COG0628 # Protein_GI_number: 15831649 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli O157:H7 # 1 370 1 370 370 584 99.0 1e-167 MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMF GRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIG AKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSALLYWR GEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPY ATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTLDNVIRPMLI RMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQPEEILE ELGEIEKPNK >gi|299856435|gb|ADWV01000016.1| GENE 3 4643 - 4999 142 118 aa, chain + ## HITS:1 COG:no KEGG:JW1679 NR:ns ## KEGG: JW1679 # Name: ydiL # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 118 1 118 118 242 100.0 3e-63 MNAYELQALRHIFAMTIDECATWIAQTGDSESWRQWENGKCAIPDRVVEQLLAMRQQRKK HLHAIIEKINNRIGNNTMRFFPDLTAFQRVYPDGNFIDWKIYQSVAAELYAHDLERLC >gi|299856435|gb|ADWV01000016.1| GENE 4 5099 - 6313 908 404 aa, chain + ## HITS:1 COG:ECs2397 KEGG:ns NR:ns ## COG: ECs2397 COG0477 # Protein_GI_number: 15831651 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 404 1 404 404 717 98.0 0 MKNPYYPTALGLYFNYLVHGMGVILMSLNMASLETLWQTNAAGVSIVISSLGIGRLSVLL FAGLLSDRFGRRPFIMLGMCCYMAFFFGILQTNNIIIAYVFGFLAGMANSFLDAGTYPSL MEAFPRSPGTANILIKAFVSSGQFLLPLIISLLVWAELWFGWSFMIAAGIMLINALFLYR CTFPPHPGRRLPVIKKTTRSTEHRCSIIDLASYTLYGYISMATFYLVSQWLSQYGQFVAG MSYTMSIKLLSIYTVGSLLCVFITAPLIRNTVRPTTLLMLYTFISFIALFTVCLHPTFYV VIIFAFVIGFTSAGGVVQIGLTLMAERFPYAKGKATGIYYSAGSIATFTIPLITAHLSQR SIADIMWFDTAIAAIGFLLALFIGLRSRKKTRHHSLKENVAPGG >gi|299856435|gb|ADWV01000016.1| GENE 5 6540 - 7805 861 421 aa, chain + ## HITS:1 COG:ydiN KEGG:ns NR:ns ## COG: ydiN COG0477 # Protein_GI_number: 16129647 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 421 3 423 423 719 99.0 0 MSQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMSSLAEKFSTDNAGIAYLISGIGLG RLISILFFGVISDKFGRRAVILMAVIMYLLFFFGIPACPNLTLAYGLAVCVGIANSALDT GGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYMLLNNIWYGYGLIIPGILFVLI TLMLLKSKFPSQLVDASVANELPQMNSKPLVWLEGVSSVLFGVAAFSTFYVIVVWMPKYA MAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKMVRPIWANVFNSALATITAAIIYLY PSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITG YLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPENDVRFGERKFSTRLNTIKHR G >gi|299856435|gb|ADWV01000016.1| GENE 6 7817 - 8683 904 288 aa, chain + ## HITS:1 COG:ydiB KEGG:ns NR:ns ## COG: ydiB COG0169 # Protein_GI_number: 16129648 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Escherichia coli K12 # 1 288 1 288 288 580 99.0 1e-166 MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALK MRGTGISMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGF DIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVT VTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTK LLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVMGFGA >gi|299856435|gb|ADWV01000016.1| GENE 7 8714 - 9472 886 252 aa, chain + ## HITS:1 COG:ECs2400 KEGG:ns NR:ns ## COG: ECs2400 COG0710 # Protein_GI_number: 15831654 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 446 99.0 1e-125 MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDILEWRVDHFADLSNVES VMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTG DDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSD VLTLLTATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVN DLRTVLTILHQA >gi|299856435|gb|ADWV01000016.1| GENE 8 9616 - 11211 1565 531 aa, chain + ## HITS:1 COG:ECs2401 KEGG:ns NR:ns ## COG: ECs2401 COG4670 # Protein_GI_number: 15831655 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase # Organism: Escherichia coli O157:H7 # 1 531 1 531 531 1065 99.0 0 MKPVKPPRINGRVPVLSAQEAVNYIPDEATLCVLGAGGGILEATTLITALADKYKQTQTP RNLSIISPTGLGDRADRGISPLAQEGLVKWALCGHWGQSPRISELAEQNKIIAYNYPQGV LTQTLRAAAAHQPGIISDIGIGTFVDPRQQGGKLNEVTKEDLIKLVEFDNKEYLYYKAIA PDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNNGGIVMMQVQKMVKKATLHPKSV RIPGYLVDIVVVDPDQSQLYGGAPVNRFISGDFTLDDSTKLSLPLNQRKLVARRALFEMR KGAVGNVGVGIADGIGLVAREEGCADDFILTVETGPIGGITSQGIAFGANVNTRAILDMT SQFDFYHGGGLDVCYLSFAEVDQHGNVGVHKFNGKIMGTGGFIDISATSKKIIFCGTLTA GSLKTEIADGKLHIVQEGRVNKFIRELPEITFSGKIALERGLDVRYITERAVFTLKEDGL HLIEIAPGVDLQKDILDKMDFTPVISPELKLMDERLFIDAAMGFVLPEAAH >gi|299856435|gb|ADWV01000016.1| GENE 9 11225 - 12376 1441 383 aa, chain + ## HITS:1 COG:ECs2402 KEGG:ns NR:ns ## COG: ECs2402 COG1960 # Protein_GI_number: 15831656 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli O157:H7 # 1 383 19 401 401 801 100.0 0 MDFSLTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMRALADNGISMLGVPEEF GGIPADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFGSAEQLRKTAESTLETGDPAY ALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKA FTLWWVDSSKPGIKINPLHKIGWHMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEM ERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLK VAWQADQHQSLRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERI GGGTDEIMIYVAGRQILKDYQNK >gi|299856435|gb|ADWV01000016.1| GENE 10 12419 - 13330 630 303 aa, chain - ## HITS:1 COG:ydiP KEGG:ns NR:ns ## COG: ydiP COG2207 # Protein_GI_number: 16129652 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 303 1 303 303 622 100.0 1e-178 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS LVG >gi|299856435|gb|ADWV01000016.1| GENE 11 13646 - 14410 820 254 aa, chain + ## HITS:1 COG:ydiQ KEGG:ns NR:ns ## COG: ydiQ COG2086 # Protein_GI_number: 16129653 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Escherichia coli K12 # 1 254 1 254 254 467 100.0 1e-131 MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLATDDDEIAALTVG GSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAIEKIGFDLLIFGEGSG DLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDI NVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAELVGIRVPPQTERKHIIIDNDSPE AIAELAEHLKKALN >gi|299856435|gb|ADWV01000016.1| GENE 12 14430 - 15368 1025 312 aa, chain + ## HITS:1 COG:ECs2405 KEGG:ns NR:ns ## COG: ECs2405 COG2025 # Protein_GI_number: 15831659 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 617 99.0 1e-176 MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAVMPYGPKCIYVLEQNDA LQRTENYAESIAALLKDKHPAMLLLAATKRGKALAARLSVQLNAALVNDATAVDIVDGHI CAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSHQCPTETVPYVAPRHEILCRE RRAKAASSVDLSKAKRVVGVGRGLAAPDDLKMVHELAAVLNAEVGCSRPIAEGENWMERE RYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIY KVVPALISQLSR >gi|299856435|gb|ADWV01000016.1| GENE 13 15424 - 16713 1144 429 aa, chain + ## HITS:1 COG:ydiS KEGG:ns NR:ns ## COG: ydiS COG0644 # Protein_GI_number: 16129655 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Escherichia coli K12 # 1 429 1 429 429 825 98.0 0 MSEDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ AGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHH YAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG LGDIAHTQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDGVMIV GDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKEREDFSASSLAQYKRELEQSCVMRD MQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNQPVRKMIMGHAKKIGLINLLK DGIKGATAL >gi|299856435|gb|ADWV01000016.1| GENE 14 16710 - 17003 334 97 aa, chain + ## HITS:1 COG:ECs2407 KEGG:ns NR:ns ## COG: ECs2407 COG2440 # Protein_GI_number: 15831661 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Escherichia coli O157:H7 # 1 97 1 97 97 207 100.0 3e-54 MSQNATVNVDIKLGVNKFHVDEGHPHIILAANPDINEFRKLMKACPAGLYKQDDAGNIHF DSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG >gi|299856435|gb|ADWV01000016.1| GENE 15 17060 - 18706 1249 548 aa, chain + ## HITS:1 COG:ydiD KEGG:ns NR:ns ## COG: ydiD COG0318 # Protein_GI_number: 16129657 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli K12 # 1 548 19 566 566 1116 99.0 0 MKVTLTFNEQRRAAYRQQGLWGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAA SCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKTGAVSVPLLPSWREAELVWVLNK CQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADNTSLT TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGH ATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNVLEKQPA DLSALRFFLCGGTTIPKKVARECQQRGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGY AAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCR MDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYV VLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTASGKIQKFLLRKDIMRRLT QDVCEEIE >gi|299856435|gb|ADWV01000016.1| GENE 16 18763 - 21141 2857 792 aa, chain - ## HITS:1 COG:ppsA KEGG:ns NR:ns ## COG: ppsA COG0574 # Protein_GI_number: 16129658 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Escherichia coli K12 # 1 792 1 792 792 1609 100.0 0 MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVSVPNGFATTADAFNQFL DQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQPELENAIREAYAQLSADDE NASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAVKHVFASLFNDRAISYRVHQG YDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQVVFITSAWGLGEMVVQGAVNPDE FYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHGKQVKIEDVPQEQRDIFSLTNEEVQ ELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQARPETVRSRGQVMERYTLHSQGKIIA EGRAIGHRIGAGPVKVIHDISEMNRIEPGDVLVTDMTDPDWEPIMKKASAIVTNRGGRTC HAAIIARELGIPAVVGCGDATERMKDGENVTVSCAEGDTGYVYAELLEFSVKSSSVETMP DLPLKVMMNVGNPDRAFDFACLPNEGVGLARLEFIINRMIGVHPRALLEFDDQEPQLQNE IREMMKGFDSPREFYVGRLTEGIATLGAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDE ENPMLGFRGAGRYVSDSFRDCFALECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEE LARQGLKRGENGLKIIMMCEIPSNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVS ELFDERNDAVKALLSMAIRAAKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTV VQTWLSLAELKK >gi|299856435|gb|ADWV01000016.1| GENE 17 21555 - 22307 788 250 aa, chain + ## HITS:1 COG:ECs2410 KEGG:ns NR:ns ## COG: ECs2410 COG1806 # Protein_GI_number: 15831664 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 250 28 277 277 498 100.0 1e-141 MSQFPVTISSITLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEG FCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRN LDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGL TIDPERLAAIREERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKIL DIMGLSRRMY >gi|299856435|gb|ADWV01000016.1| GENE 18 22464 - 23510 863 348 aa, chain + ## HITS:1 COG:ECs2411 KEGG:ns NR:ns ## COG: ECs2411 COG0722 # Protein_GI_number: 15831665 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli O157:H7 # 1 348 1 348 348 721 99.0 0 MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEKILNGEDKRLLVIIGPC SIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVNH GLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGAIGARTTESQIHREMASALSC PVGFKNGTDGNTRIAVDAIRAARASHMFLSPDKNGQMTIYQTSGNPYGHIIMRGGKKPNY HADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRRQLEVCEDICQQIRNGSTAIAGIMA ESFLREGTQKIVGGQPLTYGQSITDPCLGWEDTERLVEKLASAVDTRF >gi|299856435|gb|ADWV01000016.1| GENE 19 23642 - 23833 152 63 aa, chain + ## HITS:1 COG:ECs2412 KEGG:ns NR:ns ## COG: ECs2412 COG4256 # Protein_GI_number: 15831666 # Func_class: P Inorganic ion transport and metabolism # Function: Hemin uptake protein # Organism: Escherichia coli O157:H7 # 1 63 1 63 63 107 100.0 6e-24 MRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLL LTK >gi|299856435|gb|ADWV01000016.1| GENE 20 23837 - 25273 1163 478 aa, chain - ## HITS:1 COG:ECs2413 KEGG:ns NR:ns ## COG: ECs2413 COG0397 # Protein_GI_number: 15831667 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 478 1 478 478 950 98.0 0 MTLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNAAGVWGGETL LPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDG RAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETVEPGAMLIRVAPSHLRFGH FEHFYYRREPEKVRQLADFAIRHYWSYLEDDEDKYRLWFSDVVARTASLIAQWQTVGFAH GVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLHRLAQT LSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDY TRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPA LVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDRADDYVSRPPDWGKRLEVSCSS >gi|299856435|gb|ADWV01000016.1| GENE 21 25336 - 26049 162 237 aa, chain - ## HITS:1 COG:ydiV KEGG:ns NR:ns ## COG: ydiV COG2200 # Protein_GI_number: 16129663 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 1 237 1 237 237 476 98.0 1e-134 MKIFLENLYHSDCYFLPIRDNQQLLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQL FSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPH LNEGKDNRDLLSLSQMYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEP FIRAIQAQISPCCNCIIAGGIDTTEILAQITPFDFHALQGCLWPAVPINQITTLVQR >gi|299856435|gb|ADWV01000016.1| GENE 22 26296 - 26760 276 154 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 40 154 65 174 175 110 46 2e-23 MRFCLILITALFLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGV DCSGFVVVTMRDRFDLQLPRETKEQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYD TNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI >gi|299856435|gb|ADWV01000016.1| GENE 23 26838 - 27587 649 249 aa, chain - ## HITS:1 COG:ECs2416 KEGG:ns NR:ns ## COG: ECs2416 COG4138 # Protein_GI_number: 15831670 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type cobalamin transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 249 1 249 249 462 99.0 1e-130 MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAG QPLEAWSATKLALHRAYLSQQQTPPFAMPVWHYLTLHQHDKTRTELLNDVAGALALDDKL GRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSALC QQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTPPNLAQAYGMNFRRLDIE GHRMLISTI >gi|299856435|gb|ADWV01000016.1| GENE 24 27587 - 28138 526 183 aa, chain - ## HITS:1 COG:ECs2417 KEGG:ns NR:ns ## COG: ECs2417 COG0386 # Protein_GI_number: 15831671 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 377 99.0 1e-105 MQDSILTTVVKDIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYEQLENIQKAWADRGFVV LGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGEGRHPLYQKLIAAAPTAVA PEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGLVIQRFSPDMTPEDPIVMESIKLA LAK >gi|299856435|gb|ADWV01000016.1| GENE 25 28201 - 29181 922 326 aa, chain - ## HITS:1 COG:btuC KEGG:ns NR:ns ## COG: btuC COG4139 # Protein_GI_number: 16129667 # Func_class: H Coenzyme transport and metabolism # Function: ABC-type cobalamin transport system, permease component # Organism: Escherichia coli K12 # 1 326 1 326 326 471 99.0 1e-132 MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISPGDWFTPRGELFVWQIRLPRT LAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLC AIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMTWAIYFSTSVDLRQLMYWMM GGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGEISARQLGLPLWFWRNVLVAATG WMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGASALLLADIVARLALAA AELPIGVVTATLGAPVFIWLLLKARR >gi|299856435|gb|ADWV01000016.1| GENE 26 29282 - 29581 318 99 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG] # 3 92 4 93 96 127 66 3e-28 MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQR PGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE >gi|299856435|gb|ADWV01000016.1| GENE 27 29586 - 31973 2783 795 aa, chain - ## HITS:1 COG:ECs2420_2 KEGG:ns NR:ns ## COG: ECs2420_2 COG0072 # Protein_GI_number: 15831674 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Escherichia coli O157:H7 # 140 795 1 656 656 1295 99.0 0 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGDFKIKAAKLRGEPSEGMLC SFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVA VLNQLPLVEPEIVPVGATIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEKLRR CGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKLNAD TLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRY ERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLIGHH IADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDEPVQ ASLIMGTHREADLSLKRVKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALLLPSPISVE MSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNR YEEHWNLAKETVDFYDLKGDLESVLDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIG FVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPA ADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAK CVEALKERFQASLRD >gi|299856435|gb|ADWV01000016.1| GENE 28 31988 - 32971 1287 327 aa, chain - ## HITS:1 COG:pheS KEGG:ns NR:ns ## COG: pheS COG0016 # Protein_GI_number: 16129670 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Escherichia coli K12 # 1 327 1 327 327 668 100.0 0 MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTTLRELPPEERPAAGAVI NEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIENGGLHPVTRTIDRIESFF GELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFDTTRLLRTQTSGVQIRTMKA QQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNISFTNLKGTLHDFLRNFFEEDLQ IRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGME RLTMLRYGVTDLRSFFENDLRFLKQFK >gi|299856435|gb|ADWV01000016.1| GENE 29 33422 - 33778 578 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15802128|ref|NP_288150.1| 50S ribosomal protein L20 [Escherichia coli O157:H7 EDL933] # 1 118 1 118 118 227 100 2e-58 MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQL WIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA >gi|299856435|gb|ADWV01000016.1| GENE 30 33831 - 34043 358 70 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|110805473|ref|YP_688993.1| 50S ribosomal protein L35 [Shigella flexneri 5 str. 8401] # 1 70 1 70 70 142 98 7e-33 MEVIKMPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDL GLVIACLPYA >gi|299856435|gb|ADWV01000016.1| GENE 31 34125 - 34604 665 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 1 158 2 159 159 260 81 2e-68 QEVRLTGLEGEQLGIVSLREALEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSS KEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIG MEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKKKQ >gi|299856435|gb|ADWV01000016.1| GENE 32 34671 - 36539 1874 622 aa, chain - ## HITS:1 COG:thrS KEGG:ns NR:ns ## COG: thrS COG0441 # Protein_GI_number: 16129675 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 622 21 642 642 1310 99.0 0 MDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEDGLEIIRHSCAHLLG HAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVS WHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMK TAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEA PGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTT SSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFT QDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEAD LAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGE DNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQ KLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMD VNEVIEKLQQEIRSRSLKQLEE >gi|299856435|gb|ADWV01000016.1| GENE 33 37123 - 38238 100 371 aa, chain + ## HITS:1 COG:b1721m KEGG:ns NR:ns ## COG: b1721m COG0666 # Protein_GI_number: 16132225 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Escherichia coli K12 # 1 371 1 371 632 720 96.0 0 MSQNDIIIRTHYKSPHRLHIDSDIPTPSSEPINKFARQLITLLDTSDLSSMLSYCVIQEF TANCRKISQNCYSTALFTINFATSPIHAENILITLHYKKDFISLLLETTPIKANHLRSIL DYIEQEQLTAEDRNHCMKLSKKIHREKTIHPTVNLNGSACFLQSPSDAIFCRHLSLQYAL DSLRNGKGKVNLIKHYSSVESIQQHIPLVRDAEFRALLRHPPAGSRVIASKDFGFALDIF FCRMMANNVSHMSAILYIDNHTLSVRLRIKQSVYGQLNYVVSVYDPNDTNVAVRGTHRTA RGFLSLDKFISSGPDAQTWADRYVRNCAIAILPLLPEGVPVAILAGITTRMPFAPIHPSA MLLIMATGQTQ >gi|299856435|gb|ADWV01000016.1| GENE 34 38377 - 39021 239 214 aa, chain + ## HITS:1 COG:ECs2427 KEGG:ns NR:ns ## COG: ECs2427 COG0666 # Protein_GI_number: 15831681 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Escherichia coli O157:H7 # 1 214 419 632 632 372 90.0 1e-103 MQEIQSLVYNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQEL LNKKMVMDILAMKTRDGEPGLFAAMENNHPLCFTRFLSKVYGIAVKYKLSKINIMDLLKG ATAHGTPALYIAMSKGNKDVVLSYISTLSTFAKKYSFSQRQLFTLLAAKNHENMSAVHIA IHHNHYKTVETYYAAINAISQSLSFSADELKTYL >gi|299856435|gb|ADWV01000016.1| GENE 35 39357 - 40115 661 252 aa, chain - ## HITS:1 COG:ECs2428 KEGG:ns NR:ns ## COG: ECs2428 COG3137 # Protein_GI_number: 15831682 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative salt-induced outer membrane protein # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 459 99.0 1e-129 MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKS SSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASW LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAY AWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKMAYNVTWNSEPPESAPEHT DRRTTLSLGYSM >gi|299856435|gb|ADWV01000016.1| GENE 36 40402 - 41331 968 309 aa, chain + ## HITS:1 COG:ECs2429 KEGG:ns NR:ns ## COG: ECs2429 COG1105 # Protein_GI_number: 15831683 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 572 100.0 1e-163 MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFP AGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQ LEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQNQGIRCIIDSSGEALSAALAIGN IELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQ VVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHDDT QKIYAYLSR >gi|299856435|gb|ADWV01000016.1| GENE 37 41432 - 41722 288 96 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_2442 NR:ns ## KEGG: ECH74115_2442 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 96 1 96 96 158 100.0 4e-38 MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEGNIHELGTNTFGLISTQ SEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK >gi|299856435|gb|ADWV01000016.1| GENE 38 41828 - 42688 862 286 aa, chain + ## HITS:1 COG:ECs2431 KEGG:ns NR:ns ## COG: ECs2431 COG3001 # Protein_GI_number: 15831685 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 575 100.0 1e-164 MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEAD QLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQP QFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRL ASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQ SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA >gi|299856435|gb|ADWV01000016.1| GENE 39 42729 - 43265 533 178 aa, chain - ## HITS:1 COG:no KEGG:SDY_1819 NR:ns ## KEGG: SDY_1819 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 178 1 178 178 337 100.0 8e-92 MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENQEGINAVMLDFTHVMIDM MQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVE DQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGFI >gi|299856435|gb|ADWV01000016.1| GENE 40 43412 - 44080 753 222 aa, chain + ## HITS:1 COG:ECs2433 KEGG:ns NR:ns ## COG: ECs2433 COG0637 # Protein_GI_number: 15831687 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 410 100.0 1e-115 MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDL WYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLH MLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIA SKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDLLG >gi|299856435|gb|ADWV01000016.1| GENE 41 44243 - 44545 280 100 aa, chain + ## HITS:1 COG:ydjM KEGG:ns NR:ns ## COG: ydjM COG1988 # Protein_GI_number: 16129682 # Func_class: R General function prediction only # Function: Predicted membrane-bound metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 91 5 95 200 181 100.0 3e-46 MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKW ISKPIARAFGHRGFTHSLLAVFALLATFYLKGSGRLVHSG >gi|299856435|gb|ADWV01000016.1| GENE 42 44559 - 44834 61 91 aa, chain + ## HITS:1 COG:ydjM KEGG:ns NR:ns ## COG: ydjM COG1988 # Protein_GI_number: 16129682 # Func_class: R General function prediction only # Function: Predicted membrane-bound metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 91 110 200 200 178 100.0 2e-45 MVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSVWMPHS LPENSAVRWSSQMINTLQIQFHRLIKHQVEY >gi|299856435|gb|ADWV01000016.1| GENE 43 44967 - 46358 1743 463 aa, chain + ## HITS:1 COG:ydjN KEGG:ns NR:ns ## COG: ydjN COG1823 # Protein_GI_number: 16129683 # Func_class: R General function prediction only # Function: Predicted Na+/dicarboxylate symporter # Organism: Escherichia coli K12 # 1 462 1 462 463 751 100.0 0 MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKD SVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAA LVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSDLSVPQLVLSFIPKNPFADLT GANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAAIDTLQSWVMKLVRLVMQLTPYG VLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGILLGINGVSPLKYFRKVWPVL TFAFTSRSSAASIPLNVEAQTRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAP TVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISVEPL IDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHR >gi|299856435|gb|ADWV01000016.1| GENE 44 46362 - 47165 140 267 aa, chain - ## HITS:1 COG:no KEGG:JW1719 NR:ns ## KEGG: JW1719 # Name: ydjO # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 267 5 271 271 508 97.0 1e-143 MFSTNLIQSNYGDLNIKTLAFDSFKERLESTMAALTFFISTGQCDCDEIAESNFNRMIAY MSNINYDASKPGAPALSFDTYLQDNVKYRVIINNLYGSEIRIRGINKDFIGMDVTSVFRP EKMTNLINIKNRLVIHYLRTIYYEENYIHPAGSIFAAIQKNESLLKFPSIISMLNINLLF NPLNLPGMGSGVLEDIMSIPDSSLRKRLGYEVLSFSLQAHSLSQECIDKLDIFFAGDLFK YESVCIAAMEHLKSKATAPIQNGPLPA >gi|299856435|gb|ADWV01000016.1| GENE 45 47454 - 47717 170 87 aa, chain - ## HITS:1 COG:no KEGG:SSON_1427 NR:ns ## KEGG: SSON_1427 # Name: not_defined # Def: cell division modulator # Organism: S.sonnei # Pathway: not_defined # 1 87 1 87 87 155 100.0 6e-37 MRLVKPVMKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESF LRSPAFTVPESAQRWANQIRQEGEVTE >gi|299856435|gb|ADWV01000016.1| GENE 46 47900 - 50161 2303 753 aa, chain + ## HITS:1 COG:katE KEGG:ns NR:ns ## COG: katE COG0753 # Protein_GI_number: 16129686 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Escherichia coli K12 # 1 753 1 753 753 1515 99.0 0 MSQHNEKNPHQHQSPLHDSSEAKPGMDSLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDT RNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHE RIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVR DIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFW DYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKA SLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLI PEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQI SRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETLPGPKRG GFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIR ERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKG RVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSL TVDAVIVPCGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKVADQGEEGIVE ADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA >gi|299856435|gb|ADWV01000016.1| GENE 47 50208 - 50966 684 252 aa, chain - ## HITS:1 COG:ECs2439 KEGG:ns NR:ns ## COG: ECs2439 COG3394 # Protein_GI_number: 15831693 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 252 1 252 252 508 97.0 1e-144 MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGM HFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEDALPLEEITQELASQYLRFIELFGRKPT HLDSHHHVHMFPQIFPIVARFAAEEGIALRIDRQPLSNAGDLPANLRSSQGFSSAFYGEE ISEALFLQVLDDASHRGDRSLEVMCHPAFIDNTIRQSAYCFPRLTELEVLTSASLKYAIA ERGYRLGSYLNV >gi|299856435|gb|ADWV01000016.1| GENE 48 50979 - 52331 1563 450 aa, chain - ## HITS:1 COG:ECs2440 KEGG:ns NR:ns ## COG: ECs2440 COG1486 # Protein_GI_number: 15831694 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 933 98.0 0 MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEDGKEKLDIIFELCQRMID NAGVPMKLYKTLDRREALKDADFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLF KGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVYRHTGFKRFIGVCNIPIGMKM FIRDVLMLKDSDDLSIDLFGLNHMVFIKDVLVNGKSRFAELLDGVASGQLKASSVKNIFD LPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNP ELKVKPKELEQRGGAYYSDAACEVINAIYNDKQAEHYVNIPHHGHIDNIPADWAVEMTCK LGRDGATPHPRITHFDDKVMGLIHTIKGFEIAASNAALSGEFNDVLLALNLSPLVHSDRD AELLAREMILAHEKWLPNFADCIAELKKAH >gi|299856435|gb|ADWV01000016.1| GENE 49 52436 - 53275 782 279 aa, chain - ## HITS:1 COG:ECs2441 KEGG:ns NR:ns ## COG: ECs2441 COG2207 # Protein_GI_number: 15831695 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 279 2 280 280 518 100.0 1e-147 MQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEING KRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRT NNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKM HDKEQFSESALENMVTLSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSV TDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ >gi|299856435|gb|ADWV01000016.1| GENE 50 53286 - 53636 589 116 aa, chain - ## HITS:1 COG:ECs2442 KEGG:ns NR:ns ## COG: ECs2442 COG1447 # Protein_GI_number: 15831696 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Escherichia coli O157:H7 # 1 116 1 116 116 173 100.0 9e-44 MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKAMMDQSRMA LNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQDHLMTSMLARELITELIELHEKLKA >gi|299856435|gb|ADWV01000016.1| GENE 51 53687 - 55045 1642 452 aa, chain - ## HITS:1 COG:celB KEGG:ns NR:ns ## COG: celB COG1455 # Protein_GI_number: 16129691 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Escherichia coli K12 # 1 452 1 452 452 792 100.0 0 MSNVIASLEKVLLPFAVKIGKQPHVNAIKNGFIRLMPLTLAGAMFVLINNVFLSFGEGSF FYSLGIRLDASTIETLNGLKGIGGNVYNGTLGIMSLMAPFFIGMALAEERKVDALAAGLL SVAAFMTVTPYSVGEAYAVGANWLGGANIISGIIIGLVVAEMFTFIVRRNWVIKLPDSVP ASVSRSFSALIPGFIILSVMGIIAWALNTWGTNFHQIIMDTISTPLASLGSVVGWAYVIF VPLLWFFGIHGALALTALDNGIMTPWALENIATYQQYGSVEAALAAGKTFHIWAKPMLDS FIFLGGSGATLGLILAIFIASRRADYRQVAKLALPSGIFQINEPILFGLPIIMNPVMFIP FVLVQPILAAITLAAYYMGIIPPVTNIAPWTMPTGLGAFFNTNGSVAALLVALFNLGIAT LIYLPFVVVANKAQNAIDKEESEEDIANALKF >gi|299856435|gb|ADWV01000016.1| GENE 52 55130 - 55450 422 106 aa, chain - ## HITS:1 COG:ECs2444 KEGG:ns NR:ns ## COG: ECs2444 COG1440 # Protein_GI_number: 15831698 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Escherichia coli O157:H7 # 1 93 1 93 106 174 100.0 3e-44 MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQI AYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKKAAAN >gi|299856435|gb|ADWV01000016.1| GENE 53 55749 - 56087 442 112 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1315 NR:ns ## KEGG: ECIAI39_1315 # Name: osmE # Def: DNA-binding transcriptional activator OsmE # Organism: E.coli_IAI39 # Pathway: not_defined # 1 112 1 112 112 207 100.0 9e-53 MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMSRAQVAQIAGKPSSEVS MIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCAEYDTDPQAAK >gi|299856435|gb|ADWV01000016.1| GENE 54 56289 - 57116 915 275 aa, chain + ## HITS:1 COG:ECs2446 KEGG:ns NR:ns ## COG: ECs2446 COG0171 # Protein_GI_number: 15831700 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Escherichia coli O157:H7 # 1 275 1 275 275 549 99.0 1e-156 MTLQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLC QMAINELRQETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQPDRVLTVNIKGAVLASEQ ALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTD INPLYRLNKRQGKQLLAALGCPEHLYKKAPTADLEDDRPSLPDEVALGVTYDNIDDYLEG KNVPEQVARTIENWYLKTEHKRRPPITVFDDFWKK >gi|299856435|gb|ADWV01000016.1| GENE 55 57346 - 58233 539 295 aa, chain + ## HITS:1 COG:ECs2447 KEGG:ns NR:ns ## COG: ECs2447 COG0322 # Protein_GI_number: 15831701 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Escherichia coli O157:H7 # 1 295 1 295 295 592 100.0 1e-169 MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSR VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQSIADEQKLCYGLLGLEPLSRGRA CFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQ NWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRAS >gi|299856435|gb|ADWV01000016.1| GENE 56 58193 - 58768 292 191 aa, chain - ## HITS:1 COG:ECs2448 KEGG:ns NR:ns ## COG: ECs2448 COG3758 # Protein_GI_number: 15831702 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 191 22 212 212 399 99.0 1e-111 MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIAANGEFSLFPGMERIVT LLEGGEMFLESADRFNHTLKPLQPFAFAADQVVKAKLTAGQMSMDFNIMTRLDVCKAKVR IAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWFDGRHTLRLLQPQGKLLFSEIN WLAGHSPDQVQ >gi|299856435|gb|ADWV01000016.1| GENE 57 58971 - 59456 622 161 aa, chain - ## HITS:1 COG:spy KEGG:ns NR:ns ## COG: spy COG3678 # Protein_GI_number: 16129697 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Escherichia coli K12 # 1 161 1 161 161 227 99.0 7e-60 MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHQDMMFKDLNLTDA QKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKAKAEAQIAKMEEQRKANMLAHM ETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATAE >gi|299856435|gb|ADWV01000016.1| GENE 58 59786 - 60754 796 322 aa, chain - ## HITS:1 COG:ydjS KEGG:ns NR:ns ## COG: ydjS COG2988 # Protein_GI_number: 16129698 # Func_class: E Amino acid transport and metabolism # Function: Succinylglutamate desuccinylase # Organism: Escherichia coli K12 # 1 322 1 322 322 660 99.0 0 MDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLTPPQGALVISAGIHGNETAPV EMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSDMNRMFGGRWQLFAESGETC RARELEQCLEDFYDLGKESVRWHLDLHTAIRGSLHPQFGVLPQRDIPWDEKFLTWLGAAG LEALVFHQEPGGTFTHFSARHFGALACTLELGKALPFGQNDLRQFAVTASAIAALLSGES VGIVRTPPLRYRVVSQITRHSPSFEMHMASDTLNFMPFEKGTLLAQDGEERFTVTHDVEY VLFPNPLVALGLRAGLMLEKIS >gi|299856435|gb|ADWV01000016.1| GENE 59 60747 - 62090 1242 447 aa, chain - ## HITS:1 COG:astB KEGG:ns NR:ns ## COG: astB COG3724 # Protein_GI_number: 16129699 # Func_class: E Amino acid transport and metabolism # Function: Succinylarginine dihydrolase # Organism: Escherichia coli K12 # 1 447 1 447 447 879 99.0 0 MNAWEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRQAAKQGLLKMKALADAGFPQA VIPPHERPFIPVLRQLGFSGSDEQVLEKVARQAPHWLSSVSSASPMWVANAATIAPSADT LDGKVHLTVANLNNKFHRSLEAHVTESLLKAIFNDEEKFSVHSALPQVALLGDEGAANHN RLGGHYGEPGMQLFVYGREEGNDTRPSRYPARQTREASEAVARLNQVNPQQVIFAQQNPD VIDQGVFHNDVIAVSNRQVLFCHQQAFARQSQLLANLRARVNGFMAIEVPATQVSVSDAV STYLFNSQLLSRDDGSMMLVLPQECREHAGVWGYLNELLAADNPISELKVFDLRESMANG GGPACLRLRVVLTEEERRAVNPAVMMNDTLFNALNDWVDRYYRDRLTAADLADPQLLRGG REALDVLSQLLNLGSVYPFQREGGGNG >gi|299856435|gb|ADWV01000016.1| GENE 60 62087 - 63565 1215 492 aa, chain - ## HITS:1 COG:ECs2452 KEGG:ns NR:ns ## COG: ECs2452 COG1012 # Protein_GI_number: 15831706 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 492 1 492 492 942 97.0 0 MTLWINGDWITGQGASRVKRNPVSGEVLWQGNDADAAQVEQACRAARAAFPRWARLSLAE RQVVVERFAGLLERNKGELTAIIARETGKPRWEAATEVTAMINKIAISIKAYHARTGEQR SEMPDGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTIIFKPSELTPWSGEAV MRLWQQAGLPPGVLNLVQGGRETGQALSALEDLDGLLFTGSANTGYQLHRQLSGQPEKIL ALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQRCTCARRLLLKSGAQGDAFLARLVA VSQRLTPGNWDDEPQPFIGGLISEQAAQQVVTAWQQLEAMGGRTLLAPRLLQSETSLLTP GIIEMTGVAGVPDEEVFGPLLRVWRYDSFEEAILMANNTRFGLSCGLVSPEREKFDQLLL EARAGIVNWNKPLTGAASTAPFGGIGASGNHRPSAWYAADYCAWPMASLESDSLTLPATL NPGLDFSDEVVR >gi|299856435|gb|ADWV01000016.1| GENE 61 63562 - 64596 1107 344 aa, chain - ## HITS:1 COG:ECs2453 KEGG:ns NR:ns ## COG: ECs2453 COG3138 # Protein_GI_number: 15831707 # Func_class: E Amino acid transport and metabolism # Function: Arginine/ornithine N-succinyltransferase beta subunit # Organism: Escherichia coli O157:H7 # 1 344 1 344 344 726 99.0 0 MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAIKTWQGELPKSEQGYVF VLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSS ELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVVAEMRGVIDEHGYSPFWQSLG KRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLSQEAQDVIGQVHPQTAPARAVLE KEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVEVAEGQPAQGDFPACLVANENYHHF RVVLARTDPATERLILTAAQLDALKCHAGDRVRLVRLCAEEKTA >gi|299856435|gb|ADWV01000016.1| GENE 62 64593 - 65813 1356 406 aa, chain - ## HITS:1 COG:cstC KEGG:ns NR:ns ## COG: cstC COG4992 # Protein_GI_number: 16129702 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli K12 # 1 406 1 406 406 824 100.0 0 MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPEL REALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFA HDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALI DDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMH YGVTPDLLTTAKALGGGFPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELIN TPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAK AGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSRGSS >gi|299856435|gb|ADWV01000016.1| GENE 63 66247 - 67065 857 272 aa, chain + ## HITS:1 COG:xthA KEGG:ns NR:ns ## COG: xthA COG0708 # Protein_GI_number: 16129703 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Escherichia coli K12 # 5 272 1 268 268 567 100.0 1e-162 MAATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFY HGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESR DHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGK CSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQP LAECCVETGIDYEIRSMEKPSDHAPVWATFRR >gi|299856435|gb|ADWV01000016.1| GENE 64 67232 - 67942 585 236 aa, chain + ## HITS:1 COG:ECs2456 KEGG:ns NR:ns ## COG: ECs2456 COG0398 # Protein_GI_number: 15831710 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 236 17 252 252 402 97.0 1e-112 MNAERKFLLACLIFALVIYAIHTFGLFDLLTDLPHLQTLIRQSGLFGYSLYILLFIIATL FLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGHSHTFQA IEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLPGIVIYTVMA SDLANEGITLRFILQLCLAGLALFILVQLAKLYARHKHVDLSASRRSPLTHPKNEG >gi|299856435|gb|ADWV01000016.1| GENE 65 67947 - 68624 849 225 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_1439 NR:ns ## KEGG: EcSMS35_1439 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 225 1 225 225 435 98.0 1e-121 MSQHYSVSWKKGLAALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTML VQINGRFLTDDTRHGIVFKDGSNGHKSLFMAYATPKAFYEALKEAGGTPGENMTMDNKET THVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSC PVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKITE >gi|299856435|gb|ADWV01000016.1| GENE 66 68642 - 69346 605 234 aa, chain + ## HITS:1 COG:ECs2458 KEGG:ns NR:ns ## COG: ECs2458 COG0398 # Protein_GI_number: 15831712 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 234 2 235 235 402 99.0 1e-112 MKIQSRKIWYYRITLIILLFAMLLAWALLPGVHEFINRSVAAFAAVDQQGIERFIQSYGA LAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIARVMG REVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAAGLTSIRFRSFFIAT GLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTVVIFMAKKIWLERQKRNA >gi|299856435|gb|ADWV01000016.1| GENE 67 69346 - 69894 451 182 aa, chain + ## HITS:1 COG:ECs2459 KEGG:ns NR:ns ## COG: ECs2459 COG2128 # Protein_GI_number: 15831713 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 182 1 182 182 353 98.0 1e-97 MGLPPLSKIPFILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLVSMFVGWLERKRSPLDP VVRSLVSARIAQMCLCEFCVDITSMKVAERTGSTDKLLAVADWRQSPLFSDEERLALEYA EAASVTPPTVDDALRTRLAAHFDAQALTELTALIGLQNLSARFNSAMDIPAQGLCRIPEK RS >gi|299856435|gb|ADWV01000016.1| GENE 68 69904 - 71070 1005 388 aa, chain + ## HITS:1 COG:ynjB KEGG:ns NR:ns ## COG: ynjB COG4134 # Protein_GI_number: 16129708 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Escherichia coli K12 # 1 388 2 389 389 686 97.0 0 MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTH YAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAET LPNWRYVDTQLPVREDFSVPTEGAESPWGGAQLTFIARRDVTPQPPQTPQALLEFAKANP GTVTYPRPPDFTSTAFLEQLLIMLTPDPAALKVAPDKATFARVTAPLWQYLDALHPYLWR KGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFNQGMIGNVHF VTIPANANASAAAKVVANFLLSPNAQLRKADPAVWGDPSVLDPQKLPDGQRETLQSRMPQ DLPPVLAEPHAGWVNALEQEWLHRYGTH >gi|299856435|gb|ADWV01000016.1| GENE 69 71088 - 72578 1410 496 aa, chain + ## HITS:1 COG:ynjC KEGG:ns NR:ns ## COG: ynjC COG4135 # Protein_GI_number: 16129709 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli K12 # 1 496 1 496 496 677 96.0 0 MVAVIYAPLIPAALTLISPALSLTHWQALFADPQLPQALLATLVSTTIAAVGALLIALLV IVALWPWPKWQRMCARLPWLLAIPHVAFATSALLLFADGGLLYDYFPYFTPLMDKLGIGL GLTLAVKESAFLLWILAAVLSEKRLLQQVIVLDSLGYSRWQCLNWLLLPSVAPALAMAML AIVAWSLSVVDVAIILGPGNPPTLAVISWQWLTQGDADQQTKGALASLLLMLLLAAYVLL SYLLWRSWRRTIPRVDGIRKPATPLLPGTTLASFLPLTGVLCVVLLAILADQSTINSEAL INSLTMGLVATFIALLLLLLWLEWGPQRRQLWLWLPILLPALPLVAGQYTLALWLNLDGS WTAVVWGHLLWVMPWMLFILQPAWQRIDSRLILIAQTLSWSRAKIFFYVKCPLMLRPTLI AFAVGFSVSIAQYMPTLWLGAGRFPTLTTEAVALSSGGSNGIFAAQALWQLLLPLIIFAL TALVAKWVGYVRQGLR >gi|299856435|gb|ADWV01000016.1| GENE 70 72578 - 73231 200 217 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 195 1 200 245 81 30 2e-14 MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLFSWMIGALAGQFSCTGE LWLNEQRIDMLPTAQRQIGILFQDALLFDQFSVGQNLLLALPSTLKGTARRNAVKDALDR AGLAETYHQDPATLSGGQRARVALLRALLAQPKALLLDEPFSRLDVALRDNFRQWVFSEV RELAIPVVQVTHDLQDVPADSSVLDMAQWSENYNKLR >gi|299856435|gb|ADWV01000016.1| GENE 71 73298 - 74605 1285 435 aa, chain + ## HITS:1 COG:ynjE KEGG:ns NR:ns ## COG: ynjE COG2897 # Protein_GI_number: 16129711 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 435 6 440 440 837 98.0 0 MKRVSQMTALAMALGLACASSWAAELAKPLTPDQLQQQNGKAIDTRPSAFYNGWPQTLNG PSGHEPAALNLSASWLDKMSTEQLNAWIKQHNLKADAPVALYGNDKDVDAVKTRLQKAGF THISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKL YLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAGARVA QIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQAR GLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTM RSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDP KNPVATGERGPDSSK >gi|299856435|gb|ADWV01000016.1| GENE 72 74614 - 75198 413 194 aa, chain - ## HITS:1 COG:ynjF KEGG:ns NR:ns ## COG: ynjF COG0558 # Protein_GI_number: 16129712 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Escherichia coli K12 # 1 194 15 208 208 326 97.0 2e-89 MLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALA RRRGLTDAGGFLDISLDFLFYALVPFGFILAAPQQNALAGGWLLFAFIGTGSSFLAFAAL AAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTR VWSGYLTLKSHQRQ >gi|299856435|gb|ADWV01000016.1| GENE 73 75321 - 75728 302 135 aa, chain + ## HITS:1 COG:ynjG KEGG:ns NR:ns ## COG: ynjG COG0494 # Protein_GI_number: 16129713 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli K12 # 1 135 1 135 135 242 99.0 1e-64 MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIE ATVGEYVTSHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALVWCSPEEALQYPLAPADIP LLEAFMALRAARPAD >gi|299856435|gb|ADWV01000016.1| GENE 74 75694 - 75966 96 90 aa, chain - ## HITS:1 COG:no KEGG:SDY_1515 NR:ns ## KEGG: SDY_1515 # Name: not_defined # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 90 1 90 90 179 100.0 3e-44 MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQPCTQCCVYQDKNYSEGA VIKAEGILLQCQRDDKTLSTNPLVWRRVKP >gi|299856435|gb|ADWV01000016.1| GENE 75 76202 - 77545 1568 447 aa, chain + ## HITS:1 COG:ECs2467 KEGG:ns NR:ns ## COG: ECs2467 COG0334 # Protein_GI_number: 15831721 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Escherichia coli O157:H7 # 1 447 1 447 447 894 99.0 0 MDQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPKYRQMSLLERLVEPERV IQFRVVWVDDRNQVQVNRAWRVQFSSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALT TLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMA GMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGS GNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKASRDGRVADYAKEF GLVYLEGQQPWSVPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQ QAGVLFAPGKAANAGGVATSGLEMAQNAARLGWKAEKVDARLHHIMLDIHHACVEHGGEG EQTNYVQGANIAGFVKVADAMLAQGVI >gi|299856435|gb|ADWV01000016.1| GENE 76 77662 - 78702 230 346 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1929 NR:ns ## KEGG: EC55989_1929 # Name: ynjI # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 346 1 346 346 702 100.0 0 MKKVLLQNHPGSEKYSFNGWEIFNSNFERMIKENKAMLLCKWGFYLTCVVAVMFVFAAIT SNGLNERGLITAGCSFLYLLIMMGLIVRAGFKAKKEQLHYYQAKGIEPLSIEKLQALQLI APYRFYHKQWSETLEFWPRKPEPGKDTFQYHVLPFDSIDIISKRRESLEDQWGIEDSESY CALMEHFLSGDHGANTFKANMEEAPEQVIALLNKFAVFPSDYISDCANNRSGKSSAKLIW AAELSWMISISSTAFQNGTIEEELAWHYIMLASRKAHELFESEEDYQKNSLMGFLYWHIC CYRRKLTDAELEACYRYDKQFWEHYSKKCRWPIRNVPWGASSVKYS >gi|299856435|gb|ADWV01000016.1| GENE 77 78830 - 80791 1958 653 aa, chain - ## HITS:1 COG:topB KEGG:ns NR:ns ## COG: topB COG0550 # Protein_GI_number: 16129717 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Escherichia coli K12 # 1 653 1 653 653 1326 100.0 0 MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYAR WNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQ LAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAY TILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIW QPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIE AAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLLP QPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVF RKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKGDELLCEKGEV VERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGF LTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLY QLIDQAKRTPVRQFRGIVAPGSGGSADKKKAAPRKRSAKKSPPADEVGSGAIA >gi|299856435|gb|ADWV01000016.1| GENE 78 80796 - 81839 1193 347 aa, chain - ## HITS:1 COG:ECs2470 KEGG:ns NR:ns ## COG: ECs2470 COG0709 # Protein_GI_number: 15831724 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Escherichia coli O157:H7 # 1 347 1 347 347 679 99.0 0 MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNG TSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINKLSPEIARE VTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTERVKKNSTAQAGCKLFLTKPL GIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFANIEGVKAMTDVTGFGLLGHLSEM CQGAGVQARVDYDAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQ TSGGLLLAVMPEAENEVKTTAAEFGIELTAIGELVPARGGRAMVEIR >gi|299856435|gb|ADWV01000016.1| GENE 79 81956 - 82507 597 183 aa, chain - ## HITS:1 COG:ECs2471 KEGG:ns NR:ns ## COG: ECs2471 COG0778 # Protein_GI_number: 15831725 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 363 100.0 1e-101 MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGRERFSA VLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCEENHKVPRWEQEMSAGCAVMAMQM AAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYLGTPQLKASTSINVPDPTPFV TYF >gi|299856435|gb|ADWV01000016.1| GENE 80 82668 - 84524 1888 618 aa, chain + ## HITS:1 COG:sppA KEGG:ns NR:ns ## COG: sppA COG0616 # Protein_GI_number: 16129720 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Escherichia coli K12 # 1 618 1 618 618 1198 98.0 0 MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQVSGGDSKETASRGALL LDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDL KNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFANKIWLSPQGVVDLH GFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYL NTVAANRLIPAQQVFPGAQGLLVGLTKTGGDTAKYALENKLVDALASSAEIEKALTKEFG WSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDAR LDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANY IVANPSTLTGSIGIFGVITTIENSLDSIGVHTDGVSTSPLADVSITRALPPEAQQMMQLS IENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELA KVKQWHLEYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPLASVASTVKSESDKLAA FNDPQNHYAFCLTCANVR >gi|299856435|gb|ADWV01000016.1| GENE 81 84691 - 85707 989 338 aa, chain + ## HITS:1 COG:ECs2474 KEGG:ns NR:ns ## COG: ECs2474 COG0252 # Protein_GI_number: 15831728 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 1 338 1 338 338 680 100.0 0 MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRPEMPDFTIHEYTPLMDS SDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIP LAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNRTTKAHADGFDAFASPNLPPL LEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILR SYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVIGGADM TVEATLTKLHYLLSQELDTETIRKAMSQNLRGELTPDD >gi|299856435|gb|ADWV01000016.1| GENE 82 85718 - 86359 589 213 aa, chain + ## HITS:1 COG:ECs2475 KEGG:ns NR:ns ## COG: ECs2475 COG1335 # Protein_GI_number: 15831729 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli O157:H7 # 1 213 7 219 219 439 99.0 1e-123 MPPRALLLVDLQNDFCAGGALAVPEGDSTVDVANRLIDWCQSRGEAVIASQDWHPANHGS FASQHCVEPYMPGQLDGLPQTFWPDHCVQNSEGAQLHPLLNQKAIAAVFHKGENPLVDSY SAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFTVLDALQLGYKVNVITDGCRG VNIQPQDSAHAFMEMSAAGATLYTLADWEETQG >gi|299856435|gb|ADWV01000016.1| GENE 83 86520 - 86792 277 90 aa, chain - ## HITS:1 COG:ECs2486 KEGG:ns NR:ns ## COG: ECs2486 COG3139 # Protein_GI_number: 15831740 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 90 16 105 105 168 98.0 2e-42 MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNTEAQHMT IDTNGQMVMKSKQQLKEDFGISAKPIAMFK >gi|299856435|gb|ADWV01000016.1| GENE 84 86834 - 87247 202 137 aa, chain - ## HITS:1 COG:ECs2487 KEGG:ns NR:ns ## COG: ECs2487 COG0229 # Protein_GI_number: 15831741 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 283 99.0 6e-77 MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSETKY DSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDGPQPTGERYCVN SASLRFTDGENGEEING >gi|299856435|gb|ADWV01000016.1| GENE 85 87589 - 88584 1121 331 aa, chain + ## HITS:1 COG:ECs2488 KEGG:ns NR:ns ## COG: ECs2488 COG0057 # Protein_GI_number: 15831742 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 635 100.0 0 MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEV KDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMT GPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATT ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSV VDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIA LNDNFVKLVSWYDNETGYSNKVLDLIAHISK >gi|299856435|gb|ADWV01000016.1| GENE 86 88668 - 89552 973 294 aa, chain + ## HITS:1 COG:yeaD KEGG:ns NR:ns ## COG: yeaD COG0676 # Protein_GI_number: 16129734 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzymes related to aldose 1-epimerase # Organism: Escherichia coli K12 # 1 294 8 301 301 612 98.0 1e-175 MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQGAHLLSWKPAGEEEVLW LSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHREDADGVALTFE LTQSEETKKFWPHDFTLLAHFRVGKTCEIDLESHGEFETTSALHTYFNVGDIAKVSVSGL GDRFIDKVNDAKEDVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGHQHHLNVV GWNPGPALSVSMGDMPDDGYKTFVCVETAYASETQKVTKEKPAHLAQSIRVAKR >gi|299856435|gb|ADWV01000016.1| GENE 87 89603 - 90457 821 284 aa, chain - ## HITS:1 COG:yeaE KEGG:ns NR:ns ## COG: yeaE COG0656 # Protein_GI_number: 16129735 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Escherichia coli K12 # 1 284 1 284 284 541 98.0 1e-154 MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGA EKVVGEALTGLRDNVFLVSKVYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAF EETVAAMEKLIAQGKIRRWGVSNLDHADMQELWQLPGGNQCATNQVLYHLGSRGIEYDLL PWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHAHNISAAQVLLAWVISHQGVMAI PKAATIAHVQQNAAVLEVELSSAELTMLDKAYPAPKGKTALDMV >gi|299856435|gb|ADWV01000016.1| GENE 88 90547 - 91293 906 248 aa, chain - ## HITS:1 COG:yeaF KEGG:ns NR:ns ## COG: yeaF COG3713 # Protein_GI_number: 16129736 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein V # Organism: Escherichia coli K12 # 1 248 1 248 248 467 100.0 1e-132 MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDTDVYPVPVINYEGDNFW FRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHLDDRKSTMMAGLSYAHFTQ YGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQNEYYYGVSRKE SARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPMVDKSWTGLI STGITYKF >gi|299856435|gb|ADWV01000016.1| GENE 89 91729 - 93663 2109 644 aa, chain + ## HITS:1 COG:ECs2492 KEGG:ns NR:ns ## COG: ECs2492 COG2766 # Protein_GI_number: 15831746 # Func_class: T Signal transduction mechanisms # Function: Putative Ser protein kinase # Organism: Escherichia coli O157:H7 # 1 644 1 644 644 1293 100.0 0 MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLMAIGEPVMVDTAQEPRL SRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLA ERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQILEKEYGIPRRYLGTIMSPWA AKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDENNQDISALVGKVDIRKLEHYAQN DPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIIL AHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELTHAPCAPGT LETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLS TRFAFKILSRVFNFDHVEVAANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYA EFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKI EKPAGISNPKDFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVIS FNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS >gi|299856435|gb|ADWV01000016.1| GENE 90 93776 - 95059 947 427 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739530|ref|ZP_02146940.1| 50S ribosomal protein L34 [Phaeobacter gallaeciensis BS107] # 1 418 1 433 445 369 44 1e-101 MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAINKRSVTDVDSGESVSIPTEDIS EPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQGQASQDGEGQDEFVFQIS KDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGVPANISVVRSLQNSLARRTAM TAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAELRAKIERVPFIDTFDLRYKNYE KRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKE VDEHEFFYSQETGGTIVSSALKLMDEVVKERYNPAQWNIYAAQASDGDNWADDSPLCHEI LAKKLLPVVRYYSYIEITRRAHQTLWREYEHLQSTFDNFAMQHIRDQDDIYPVFRELFHK QNATAKD >gi|299856435|gb|ADWV01000016.1| GENE 91 95338 - 96681 802 447 aa, chain + ## HITS:1 COG:yeaI_2 KEGG:ns NR:ns ## COG: yeaI_2 COG2199 # Protein_GI_number: 16129739 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 267 447 1 181 181 356 100.0 6e-98 MVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVI FLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYI FRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYNADYSLY VVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLL LTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFN SVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARL EGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTRNI SLVMTEADKALREAKSEGGNKVIIHHI >gi|299856435|gb|ADWV01000016.1| GENE 92 96880 - 98352 1102 490 aa, chain + ## HITS:1 COG:ZyeaJ_2 KEGG:ns NR:ns ## COG: ZyeaJ_2 COG2199 # Protein_GI_number: 15802200 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 EDL933 # 325 490 1 166 166 326 100.0 7e-89 MLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMR ALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAAL LPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQS GSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLR NIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDIL YFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRL QKLVQSGSSVMFIAIDMDKLKLINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDE FCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLY VNKQNKNSRS >gi|299856435|gb|ADWV01000016.1| GENE 93 98395 - 98898 498 167 aa, chain + ## HITS:1 COG:ECs2496 KEGG:ns NR:ns ## COG: ECs2496 COG2606 # Protein_GI_number: 15831750 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 317 98.0 6e-87 MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKG NGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLK LVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPELLNFRRTA >gi|299856435|gb|ADWV01000016.1| GENE 94 99173 - 99619 607 148 aa, chain + ## HITS:1 COG:yeaL KEGG:ns NR:ns ## COG: yeaL COG2707 # Protein_GI_number: 16129743 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 148 1 148 148 188 100.0 3e-48 MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFPWIEKQGLSIGIIILTI GVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRGVTLMGSQPQLVAGLLVGT VLGVALFRGVPVGPLIAAGLVSLIVGKQ >gi|299856435|gb|ADWV01000016.1| GENE 95 99576 - 100010 276 144 aa, chain - ## HITS:1 COG:ECs2499 KEGG:ns NR:ns ## COG: ECs2499 COG2207 # Protein_GI_number: 15831753 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 144 130 273 273 250 97.0 5e-67 MTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKEPVEWGSLGQWAGFFAMSER NLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLG QTPGRYIAGLTTVSPQSAKPDPRQ >gi|299856435|gb|ADWV01000016.1| GENE 96 100494 - 101675 603 393 aa, chain + ## HITS:1 COG:ECs2500 KEGG:ns NR:ns ## COG: ECs2500 COG2807 # Protein_GI_number: 15831754 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Escherichia coli O157:H7 # 1 393 1 393 393 640 99.0 0 MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAYSLTTAQTGLLTTLPLL AFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPYLLFGGTAVIGGGIALGNV LLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLALNGFGWQGALFMLMCFPLLA LFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTLFLGINSLVYYVIIGWLPAILIS RGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQRGIAAFVALMCAVGAVGLCFMPAH AITWTLLFGFGSGATMILGLTFIGLRASSAHQAAALSGMAQSVGYLLAACGPPLMGKIHD ANGDWSVPLMGVAILSLLMAIFGLCAGRDKEIR >gi|299856435|gb|ADWV01000016.1| GENE 97 101730 - 102077 451 115 aa, chain + ## HITS:1 COG:ECs2501 KEGG:ns NR:ns ## COG: ECs2501 COG3189 # Protein_GI_number: 15831755 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 115 8 122 122 222 99.0 2e-58 MNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEITPSTELRKAFHGEVVD FATFREQYLAELAQHEQEGKRLADIAKKQPLTLLYAAKNTTQNHALVLADWLRSL >gi|299856435|gb|ADWV01000016.1| GENE 98 102099 - 102353 165 84 aa, chain - ## HITS:1 COG:yoaF KEGG:ns NR:ns ## COG: yoaF COG3042 # Protein_GI_number: 16129747 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Escherichia coli K12 # 1 84 1 84 84 154 100.0 3e-38 MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQKGGTLIPVQTAQGVSNN CKLPGGETIDEWALWRRDHPAGEK >gi|299856435|gb|ADWV01000016.1| GENE 99 102536 - 103561 744 341 aa, chain + ## HITS:1 COG:yeaP_2 KEGG:ns NR:ns ## COG: yeaP_2 COG2199 # Protein_GI_number: 16129748 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 168 341 1 174 174 350 100.0 2e-96 MSDQIIARVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKVDVEARLQHIMFARNSQ KMHIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCIAARNLGITTFLSTPIHLPDGS FYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKEALVEQLREANAALIAQSYTDSLT GLPNRRAIFENLTTLFSLARHLNHKIMIAFIDLDNFKLINDRFGHNSGDLFLIQVGERLN TLQQNGEVIGRLGGDEFLVVSLNNENADISSLRERIQQQIRGEYHLGDVDLYYPGASLGI VEVDPETTDADSALHAADIAMYQEKKHKQKTPFVAHPALHS >gi|299856435|gb|ADWV01000016.1| GENE 100 103828 - 104076 337 82 aa, chain - ## HITS:1 COG:YPO1181 KEGG:ns NR:ns ## COG: YPO1181 COG2261 # Protein_GI_number: 16121476 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 82 26 107 107 99 82.0 2e-21 MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGGWISTLFGFGKVDGFNF GSFVVAVIGAIVVLFIYRKIKS >gi|299856435|gb|ADWV01000016.1| GENE 101 104303 - 105451 216 382 aa, chain - ## HITS:1 COG:ECs3276 KEGG:ns NR:ns ## COG: ECs3276 COG0675 # Protein_GI_number: 15832530 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 382 1 382 382 722 97.0 0 MRRFAGACRFVFNRALALQNENHEAGNKYIPYGKMASWLVEWKNATETQWLKDSPSQPLQ QSLKGLERAYKNFFQKRAAFPRFKKRGQNDAFRYPQGVKLDQENSRIFLPKLGWMRYRNS RQVTGVVKNVTVSQSCGKWYISIQTESEVSTPVHPSASMVGLDAGVAKLATLSDGTVFEP VNSFQKNQKTPARLQRQLSRKVKFSNNWQKQKRKIQRLHSCIANIRRDYLHKVTTTVSKN HAMIVIEDLKVSNMSKSAAGTVSQPGRNVRAKSGLNRSILDQGWYEMRRQLEYKQLWSGG QVLAVPPAYTSQRCACCGHTAKENRLSQSQFRCQVCGYTANADVNGARNILAAGHAVLAC GEMVQSGRSLKQEPTEMIQATA >gi|299856435|gb|ADWV01000016.1| GENE 102 106043 - 106711 734 222 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_1426 NR:ns ## KEGG: ECIAI1_1426 # Name: ydcL # Def: putative lipoprotein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 222 1 222 222 433 100.0 1e-120 MRTTSFAKVAALCGLLALSGCASKITQPDKYSGFLNNYSDLKETTSATGKPVLRWVDPSF DQSKYDSIVWNPITYYPVPKPSTQVGQKVLDKILNYTNTEMKEAIAQRKPVVTTAGPRSL IFRGAITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTMDTRLYFEGELIDAATNKPVI KVVRQGEGKDLNNESTPMAFENIKQVIDDMATDATMFDVNKK >gi|299856435|gb|ADWV01000016.1| GENE 103 107014 - 107607 680 197 aa, chain - ## HITS:1 COG:tehB KEGG:ns NR:ns ## COG: tehB COG0500 # Protein_GI_number: 16129389 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 197 1 197 197 400 99.0 1e-112 MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDK NAMSIANVERIKSIENLDNLHTRVVDLNNLTFDGQYDFILSTVVLMFLEAKTIPGLIANM QRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEGWERVKYNEDVGELHRTDA NGNRIKLRFATMLARKK >gi|299856435|gb|ADWV01000016.1| GENE 104 107604 - 108596 881 330 aa, chain - ## HITS:1 COG:tehA KEGG:ns NR:ns ## COG: tehA COG1275 # Protein_GI_number: 16129388 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Escherichia coli K12 # 1 330 1 330 330 578 99.0 1e-165 MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGLVILAMIIWGLLTSAFI TRLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGFVPWFRPLAVCLFSFGVVVQLAYA AWQTAGLWRGSHPEEATTPGLYLPTVANNFISAMACGALGYTDAGLVFLGAGVFSWLSLE PVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSVNGGEGDTLAKMLFGYGLLQLLF MLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGSGSDNGFFHTLAVPLFIFTNFIIAI LLIRTFALLMQGKLLVRTERAVLMKAEDKE >gi|299856435|gb|ADWV01000016.1| GENE 105 108720 - 109700 611 326 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_1605 NR:ns ## KEGG: EcE24377A_1605 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 326 1 326 326 642 100.0 0 MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCW IYDQNAIAFGGAVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLV CGQCRIFGHALINQHSMIVAAQGLTPDHQLLLQIYDRARVSASRIVHQAQIYGDAVIRYA FIEHRAEVFDFASIEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDG DTVHVRGPKVINGEERITRTPLAGLL >gi|299856435|gb|ADWV01000016.1| GENE 106 109695 - 110231 923 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16129386|ref|NP_415944.1| ribosomal-protein-L7/L12-serine acetyltransferase [Escherichia coli str. K-12 substr. MG1655] # 1 178 1 178 179 360 99 2e-98 MTETIKVSESLELHAVAENHVTPLYQLICKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVM LHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDESHQGQGIISQALQALIHH YAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAEFLNDAYDDVNLYARIIDS >gi|299856435|gb|ADWV01000016.1| GENE 107 110294 - 110518 211 74 aa, chain - ## HITS:1 COG:ydcH KEGG:ns NR:ns ## COG: ydcH COG2841 # Protein_GI_number: 16129385 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 20 74 1 55 55 82 100.0 2e-16 MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKD EMLKILQQESVKEV >gi|299856435|gb|ADWV01000016.1| GENE 108 110658 - 112277 1567 539 aa, chain - ## HITS:1 COG:ECs2029 KEGG:ns NR:ns ## COG: ECs2029 COG3131 # Protein_GI_number: 15831283 # Func_class: P Inorganic ion transport and metabolism # Function: Periplasmic glucans biosynthesis protein # Organism: Escherichia coli O157:H7 # 1 539 13 551 551 1131 100.0 0 MAAVCGTSGIASLFSQAAFAADSDIADGQTQRFDFSILQSMAHDLAQTAWRGAPRPLPDT LATMTPQAYNSIQYDAEKSLWHNVENRQLDAQFFHMGMGFRRRVRMFSVDPATHLAREIH FRPELFKYNDAGVDTKQLEGQSDLGFAGFRVFKAPELARRDVVSFLGASYFRAVDDTYQY GLSARGLAIDTYTDSKEEFPDFTAFWFDTVKPGATTFTVYALLDSASITGAYKFTIHCEK SQVIMDVENHLYARKDIKQLGIAPMTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGE WICRPLNNPQKLQFNAYTDNNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGK GTIGLMEIPTTGETLDNIVCFWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRT GMGGFPEGWAPGEHYPEKWARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIE PIDGYRIQFDWYPTSDSTDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS Prediction of potential genes in microbial genomes Time: Sun May 15 15:37:26 2011 Seq name: gi|299856434|gb|ADWV01000017.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont16.1, whole genome shotgun sequence Length of sequence - 106781 bp Number of predicted genes - 99, with homology - 99 Number of transcription units - 59, operones - 19 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 292 157 ## SC024 TniAdelta1 2 1 Op 2 . - CDS 367 - 1074 213 ## COG2200 FOG: EAL domain 3 1 Op 3 . - CDS 1071 - 1307 169 ## SeSA_B0043 putative mercury resistance protein 4 1 Op 4 . - CDS 1304 - 1666 357 ## SeSA_B0044 transcriptional regulator MerD 5 1 Op 5 . - CDS 1684 - 2187 487 ## COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes - Prom 2275 - 2334 8.0 6 2 Tu 1 . - CDS 2342 - 3202 329 ## COG2367 Beta-lactamase class A - Prom 3237 - 3296 2.9 7 3 Tu 1 . - CDS 3385 - 3942 337 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 4037 - 4096 4.0 + Prom 3935 - 3994 4.6 8 4 Tu 1 . + CDS 4106 - 7111 1343 ## COG4644 Transposase and inactivated derivatives, TnpA family 9 5 Tu 1 . - CDS 7136 - 7288 60 ## ASA_P4G088 putative mercuric transport protein + Prom 7221 - 7280 2.6 10 6 Tu 1 . + CDS 7306 - 7740 195 ## COG0789 Predicted transcriptional regulators + Term 7983 - 8022 -0.7 11 7 Tu 1 . - CDS 7847 - 8113 230 ## COG1662 Transposase and inactivated derivatives, IS1 family - Prom 8258 - 8317 1.9 12 8 Tu 1 . + CDS 8586 - 9743 738 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 9933 - 9970 1.0 13 9 Tu 1 . - CDS 9985 - 10860 469 ## COG5464 Uncharacterized conserved protein + Prom 11125 - 11184 4.5 14 10 Op 1 4/0.259 + CDS 11408 - 12640 1249 ## COG0477 Permeases of the major facilitator superfamily 15 10 Op 2 1/0.852 + CDS 12681 - 13961 1210 ## COG2733 Predicted membrane protein + Prom 13980 - 14039 1.7 16 11 Op 1 4/0.259 + CDS 14077 - 15228 1352 ## COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 17 11 Op 2 . + CDS 15238 - 16005 439 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 18 11 Op 3 . + CDS 16002 - 16259 207 ## EC55989_5000 hypothetical protein 19 11 Op 4 2/0.704 + CDS 16324 - 17184 571 ## COG3204 Uncharacterized protein conserved in bacteria + Prom 17200 - 17259 1.9 20 12 Tu 1 . + CDS 17309 - 18430 926 ## COG0477 Permeases of the major facilitator superfamily - Term 18318 - 18366 2.9 21 13 Tu 1 . - CDS 18443 - 18997 461 ## COG1859 RNA:NAD 2'-phosphotransferase - Prom 19034 - 19093 5.0 + Prom 19128 - 19187 3.8 22 14 Op 1 3/0.444 + CDS 19235 - 19930 602 ## COG3314 Uncharacterized protein conserved in bacteria 23 14 Op 2 . + CDS 19927 - 20388 587 ## COG0700 Uncharacterized membrane protein 24 14 Op 3 . + CDS 20401 - 21573 1244 ## ECSE_4602 isoaspartyl dipeptidase 25 14 Op 4 . + CDS 21638 - 22549 907 ## COG0583 Transcriptional regulator 26 15 Tu 1 . - CDS 22542 - 22934 189 ## ECIAI1_4543 DNA replication/recombination/repair protein + Prom 23429 - 23488 6.9 27 16 Tu 1 . + CDS 23606 - 24436 472 ## ECSE_4598 hypothetical protein + Term 24513 - 24561 0.3 - Term 24526 - 24563 4.1 28 17 Tu 1 . - CDS 24577 - 25350 1050 ## COG2186 Transcriptional regulators - Prom 25448 - 25507 5.1 - Term 25497 - 25540 8.6 29 18 Op 1 7/0.111 - CDS 25565 - 27025 1847 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Term 27063 - 27099 8.6 30 18 Op 2 . - CDS 27106 - 28290 1507 ## COG1312 D-mannonate dehydratase - Prom 28408 - 28467 3.3 + Prom 28546 - 28605 2.4 31 19 Tu 1 . + CDS 28630 - 29973 1647 ## COG2610 H+/gluconate symporter and related permeases 32 20 Op 1 . - CDS 29878 - 30201 99 ## gi|301328042|ref|ZP_07221201.1| hypothetical protein HMPREF9535_02853 33 20 Op 2 . - CDS 30223 - 31125 610 ## EcSMS35_4847 protein FimH 34 20 Op 3 4/0.259 - CDS 31145 - 31648 224 ## COG3539 P pilus assembly protein, pilin FimA 35 20 Op 4 6/0.185 - CDS 31661 - 32131 122 ## COG3539 P pilus assembly protein, pilin FimA 36 20 Op 5 10/0.111 - CDS 32201 - 34837 1258 ## COG3188 P pilus assembly protein, porin PapC 37 20 Op 6 7/0.111 - CDS 34904 - 35629 518 ## COG3121 P pilus assembly protein, chaperone PapD 38 20 Op 7 4/0.259 - CDS 35666 - 36205 307 ## COG3539 P pilus assembly protein, pilin FimA 39 20 Op 8 3/0.444 - CDS 36270 - 36818 456 ## COG3539 P pilus assembly protein, pilin FimA 40 21 Tu 1 . - CDS 37299 - 37895 347 ## COG0582 Integrase - Prom 38021 - 38080 7.9 41 22 Tu 1 . - CDS 38373 - 38975 24 ## COG0582 Integrase - Prom 39204 - 39263 6.3 + Prom 38940 - 38999 6.4 42 23 Tu 1 . + CDS 39236 - 39457 74 ## ECUMN_4918 hypothetical protein + Prom 40261 - 40320 6.1 43 24 Op 1 . + CDS 40432 - 41148 506 ## G2583_5112 hypothetical protein 44 24 Op 2 2/0.704 + CDS 41168 - 42274 557 ## COG3055 Uncharacterized protein conserved in bacteria + Term 42279 - 42320 2.5 45 25 Tu 1 . + CDS 42339 - 43319 94 ## COG2801 Transposase and inactivated derivatives + Term 43354 - 43395 -0.9 + Prom 43450 - 43509 4.2 46 26 Tu 1 . + CDS 43531 - 44403 460 ## COG3440 Predicted restriction endonuclease + Prom 44470 - 44529 12.4 47 27 Op 1 5/0.222 + CDS 44573 - 46648 836 ## COG1401 GTPase subunit of restriction endonuclease 48 27 Op 2 . + CDS 46641 - 47984 279 ## COG4268 McrBC 5-methylcytosine restriction system component 49 27 Op 3 . + CDS 47981 - 48367 117 ## EFER_3103 hypothetical protein 50 27 Op 4 . + CDS 48418 - 48879 448 ## EFER_3102 putative type I restriction-modification system methyltransferase subunit 51 28 Op 1 . + CDS 49297 - 50145 280 ## EFER_3098 hypothetical protein 52 28 Op 2 . + CDS 50148 - 51305 754 ## EFER_3097 hypothetical protein 53 28 Op 3 . + CDS 51295 - 52980 1012 ## COG0433 Predicted ATPase 54 28 Op 4 . + CDS 52988 - 53530 201 ## EFER_3095 hypothetical protein 55 28 Op 5 . + CDS 53551 - 54996 591 ## COG0515 Serine/threonine protein kinase + Term 55117 - 55152 2.2 - Term 55102 - 55143 1.0 56 29 Op 1 12/0.074 - CDS 55198 - 56319 383 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 57 29 Op 2 . - CDS 56238 - 56462 141 ## COG0582 Integrase - TRNA 56664 - 56748 79.1 # Leu CAA 0 0 + Prom 56820 - 56879 1.8 58 30 Tu 1 1/0.852 + CDS 56944 - 57963 1240 ## COG1064 Zn-dependent alcohol dehydrogenases + Term 57968 - 58010 2.4 + Prom 58014 - 58073 3.8 59 31 Tu 1 . + CDS 58093 - 59595 1532 ## COG0433 Predicted ATPase + Term 59691 - 59717 -1.0 - Term 59672 - 59709 2.4 60 32 Op 1 22/0.000 - CDS 59714 - 60796 1400 ## COG0795 Predicted permeases 61 32 Op 2 . - CDS 60796 - 61875 974 ## COG0795 Predicted permeases - Prom 61924 - 61983 3.8 + Prom 61945 - 62004 5.4 62 33 Tu 1 . + CDS 62163 - 63674 1700 ## COG0260 Leucyl aminopeptidase + Term 63747 - 63789 -1.0 63 34 Op 1 5/0.222 + CDS 63808 - 64251 429 ## COG2927 DNA polymerase III, chi subunit 64 34 Op 2 . + CDS 64251 - 67106 3342 ## COG0525 Valyl-tRNA synthetase + Term 67128 - 67164 7.2 - Term 67117 - 67150 5.2 65 35 Tu 1 . - CDS 67161 - 68357 501 ## COG4269 Predicted membrane protein - Prom 68399 - 68458 7.3 + Prom 68341 - 68400 10.4 66 36 Tu 1 . + CDS 68550 - 69053 591 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 69059 - 69096 2.4 - Term 69047 - 69084 1.6 67 37 Tu 1 . - CDS 69099 - 69515 754 ## COG3076 Uncharacterized protein conserved in bacteria - Prom 69611 - 69670 3.8 + Prom 69584 - 69643 6.2 68 38 Tu 1 . + CDS 69677 - 70681 1096 ## COG0078 Ornithine carbamoyltransferase + Term 70698 - 70743 2.7 - Term 70686 - 70729 5.3 69 39 Op 1 . - CDS 70782 - 71012 302 ## ECS88_4840 conserved hypothetical protein; length varies in various strains; absent from some 70 39 Op 2 . - CDS 70999 - 72342 686 ## B21_04083 hypothetical protein - Prom 72391 - 72450 8.0 - Term 72417 - 72456 4.3 71 40 Tu 1 . - CDS 72465 - 72917 599 ## COG2731 Beta-galactosidase, beta subunit - Prom 72943 - 73002 3.3 72 41 Tu 1 . - CDS 73062 - 73655 310 ## COG1309 Transcriptional regulator - Prom 73681 - 73740 5.0 + Prom 73643 - 73702 5.5 73 42 Tu 1 . + CDS 73726 - 74439 271 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 74459 - 74496 -0.0 + Prom 74461 - 74520 2.6 74 43 Tu 1 . + CDS 74570 - 74965 260 ## COG0251 Putative translation initiation inhibitor, yjgF family + Prom 75168 - 75227 4.5 75 44 Op 1 19/0.000 + CDS 75384 - 76319 1042 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 76 44 Op 2 6/0.185 + CDS 76332 - 76793 548 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit + Term 76812 - 76851 5.0 77 45 Tu 1 . + CDS 76866 - 77252 568 ## COG0251 Putative translation initiation inhibitor, yjgF family - Term 77299 - 77335 2.4 78 46 Tu 1 . - CDS 77458 - 80154 2848 ## COG0474 Cation transport ATPase + Prom 80440 - 80499 7.1 79 47 Tu 1 . + CDS 80533 - 81480 781 ## COG1609 Transcriptional regulators + Term 81520 - 81546 -1.0 + Prom 81491 - 81550 4.4 80 48 Op 1 9/0.111 + CDS 81602 - 83020 1524 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 81 48 Op 2 3/0.444 + CDS 83070 - 84725 1526 ## COG0366 Glycosidases + Term 84738 - 84775 4.4 + Prom 84881 - 84940 6.5 82 49 Tu 1 . + CDS 85119 - 87257 2503 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase + Term 87333 - 87377 4.1 + Prom 87292 - 87351 1.8 83 50 Tu 1 . + CDS 87415 - 87879 397 ## COG0602 Organic radical activating enzymes + Term 87951 - 87997 -0.9 - Term 87872 - 87915 11.7 84 51 Op 1 . - CDS 87924 - 88310 573 ## COG3783 Soluble cytochrome b562 - Prom 88332 - 88391 2.4 85 51 Op 2 . - CDS 88493 - 89845 1409 ## COG0312 Predicted Zn-dependent proteases and their inactivated homologs - Prom 89889 - 89948 3.1 + Prom 89860 - 89919 7.1 86 52 Tu 1 . + CDS 89939 - 90490 771 ## COG3028 Uncharacterized protein conserved in bacteria - Term 90547 - 90598 5.9 87 53 Tu 1 . - CDS 90641 - 92014 1661 ## COG0773 UDP-N-acetylmuramate-alanine ligase - Prom 92183 - 92242 4.9 + Prom 92075 - 92134 2.2 88 54 Tu 1 . + CDS 92190 - 93188 1125 ## COG0158 Fructose-1,6-bisphosphatase + Term 93196 - 93229 6.1 89 55 Op 1 11/0.074 - CDS 93221 - 94216 1197 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 90 55 Op 2 21/0.000 - CDS 94203 - 95225 1170 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 91 55 Op 3 16/0.000 - CDS 95239 - 96741 208 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 96936 - 96995 4.4 - Term 96945 - 96993 0.1 92 55 Op 4 . - CDS 97051 - 98007 1155 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 98109 - 98168 4.5 + Prom 98052 - 98111 3.6 93 56 Tu 1 . + CDS 98317 - 98847 743 ## COG0221 Inorganic pyrophosphatase + Term 98895 - 98937 -0.6 94 57 Op 1 8/0.111 - CDS 98927 - 99277 348 ## COG2337 Growth inhibitor 95 57 Op 2 . - CDS 99271 - 99522 310 ## COG2336 Growth regulator - Prom 99562 - 99621 4.4 - Term 99690 - 99726 5.2 96 58 Op 1 6/0.185 - CDS 99734 - 100075 214 ## COG2105 Uncharacterized conserved protein 97 58 Op 2 16/0.000 - CDS 100078 - 103857 4264 ## COG2911 Uncharacterized protein conserved in bacteria 98 58 Op 3 . - CDS 103854 - 105587 1656 ## COG0729 Outer membrane protein - Prom 105719 - 105778 2.8 + Prom 105678 - 105737 3.3 99 59 Tu 1 . + CDS 105793 - 106431 676 ## COG0225 Peptide methionine sulfoxide reductase + Term 106615 - 106645 3.0 Predicted protein(s) >gi|299856434|gb|ADWV01000017.1| GENE 1 1 - 292 157 97 aa, chain - ## HITS:1 COG:no KEGG:SC024 NR:ns ## KEGG: SC024 # Name: not_defined # Def: TniAdelta1 # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 97 13 109 434 163 98.0 2e-39 MAADTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEAADMAAQALGLSRRQVY VLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERV >gi|299856434|gb|ADWV01000017.1| GENE 2 367 - 1074 213 235 aa, chain - ## HITS:1 COG:AGl374gl_3 KEGG:ns NR:ns ## COG: AGl374gl_3 COG2200 # Protein_GI_number: 15890301 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 13 216 8 212 266 175 43.0 7e-44 MTSSQPAGWTAAELAQAAARGQLDLHYQPLVDLRDHRIAGAEALMRWRHPRLGLLPPGQF LPLAESFGLMPEIGAWVLGEACRQMHKWQGPAWQPFRLAINVSASQVGPTFDDEVKRVLA DMALPAELLEIELTESVAFGNPALFASFDALRAIGVRFAADDFGTGYSCLQHLKCCPITT LKIDQSFVARLPDDARDQTIVRAVIQLAHGLGMDVIFRRRLHQLIGRNGCCAASS >gi|299856434|gb|ADWV01000017.1| GENE 3 1071 - 1307 169 78 aa, chain - ## HITS:1 COG:no KEGG:SeSA_B0043 NR:ns ## KEGG: SeSA_B0043 # Name: not_defined # Def: putative mercury resistance protein # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 78 1 78 78 132 100.0 4e-30 MNAPDKLPPETRQPVSGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGVAALALT GLFVLAVTRLLRAFRGGS >gi|299856434|gb|ADWV01000017.1| GENE 4 1304 - 1666 357 120 aa, chain - ## HITS:1 COG:no KEGG:SeSA_B0044 NR:ns ## KEGG: SeSA_B0044 # Name: merD # Def: transcriptional regulator MerD # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 120 1 120 120 172 100.0 4e-42 MSAYTVSQLAHNAGVSVHIVRDYLVRGLLRPVACTTGGYGVFDDAALQRLCFVRAAFEAG IGLDALARLCRALDAADGAQAAAQLAVLRQLVERRRAALAHLDAQLASMPAERAHEEALP >gi|299856434|gb|ADWV01000017.1| GENE 5 1684 - 2187 487 167 aa, chain - ## HITS:1 COG:Ta1341 KEGG:ns NR:ns ## COG: Ta1341 COG1249 # Protein_GI_number: 16082328 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes # Organism: Thermoplasma acidophilum # 4 165 304 467 469 115 39.0 4e-26 MEHIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALNLTAMPAVVFTDPQVATVGYSE AEAHHDGIKTDSRTLTLDNVPRALANFDTRGFIKLVVEEGSGRLIGVQAVAPEAGELIQT AALAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFNKDVKQLSCCAG >gi|299856434|gb|ADWV01000017.1| GENE 6 2342 - 3202 329 286 aa, chain - ## HITS:1 COG:SMa1952 KEGG:ns NR:ns ## COG: SMa1952 COG2367 # Protein_GI_number: 16263521 # Func_class: V Defense mechanisms # Function: Beta-lactamase class A # Organism: Sinorhizobium meliloti # 30 279 22 274 281 201 46.0 1e-51 MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRP EERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVREL CSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTM PAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGS RGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW >gi|299856434|gb|ADWV01000017.1| GENE 7 3385 - 3942 337 185 aa, chain - ## HITS:1 COG:YPCD1.91 KEGG:ns NR:ns ## COG: YPCD1.91 COG1961 # Protein_GI_number: 16082774 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Yersinia pestis # 1 183 1 183 183 257 80.0 1e-68 MRLFGYARVSTSQQSLDLQVRALKDAGVKANRIFTDKASGSSTDREGLDLLRMKVEEGDV ILVKKLDRLGRDTADMIQLIKEFDAQGVAVRFIDDGISTDGDMGQMVVTILSAVAQAERR RILERTNEGRQEAKLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILE DERAS >gi|299856434|gb|ADWV01000017.1| GENE 8 4106 - 7111 1343 1001 aa, chain + ## HITS:1 COG:YPCD1.90c KEGG:ns NR:ns ## COG: YPCD1.90c COG4644 # Protein_GI_number: 16082773 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, TnpA family # Organism: Yersinia pestis # 415 991 185 761 771 822 68.0 0 MPVDFLTTEQTESYGRFTGEPDELQLARYFHLDEADKEFIGKSRGDHNRLGIALQIGCVR FLGTFLTDMNHIPSGVRHFTARQLGIRDITVLAEYGQRENTRREHAALIRQHYQYREFAW PWTFRLTRLLYTRSWISNERPGLLFDLATGWLMQHRIILPGATTLTRLISEVREKATLRL WNKLALIPSAEQRSQLEMLLGPTDCSRLSLLESLKKGPVTISGPAFNEAIERWKTLNDFG LHAENLSTLPAVRLKNLARYAGMTSVFNIARMSPQKRMAVLVAFVLAWETLALDDALDVL DAMLAVIIRDARKIGQKKRLRSLKDLDKSALALASACSYLLKEETPDESIRAEVFSYIPR QKLAEIITLVREIARPSDDNFHEEMVEQYGRVRRFLPHLLNTVKFSSAPAGVTTLNACDY LSREFSSRRQFFDDAPTEIISRSWKRLVINKEKHITRRGYTLCFLSKLQDSLRRRDVYVT GSNRWGDPRARLLQGADWQANRIKVYRSLGHPTDPQEAIKSLGHQLDSRYRQVAARLCEN EAVELDVSGPKPRLTISPLASLDEPDSLKRLSKMISDLLPPVDLTELLLEINAHTGFADE FFHASEASARVDDLPVSISAVLMAEACNIGLEPLIRSNVPALTRHRLNWTKANYLRAETI TSANARLVDFQATLPLAQIWGGGEVASADGMRFVTPVRTINAGPNRKYFGNNRGITWYNF VSDQYSGFHGIVIPGTLRDSIFVLEGLLEQETGLNPTEIMTDTAGASELVFGLFWLLGYQ FSPRLADAGASVFWRMDHDADYGVLNDIARGQSDPRKIVLQWDEMIRTAGSLKLGKVQVS VLVRSLLKSERPSGLTQAIIEVGRINKTLYLLNYIDDEDYRRRILTQLNRGESRHAVARA ICHGQKGEIRKRYTDGQEDQLGTLGLVTNAVVLWNTIYMQAALDHLRAQGETLNDEDIAR LSPLCHGHINMLGHYSFTLAELVTKGHLRPLKEASEAENVA >gi|299856434|gb|ADWV01000017.1| GENE 9 7136 - 7288 60 50 aa, chain - ## HITS:1 COG:no KEGG:ASA_P4G088 NR:ns ## KEGG: ASA_P4G088 # Name: merT # Def: putative mercuric transport protein # Organism: A.salmonicida # Pathway: not_defined # 1 50 1 50 134 95 98.0 4e-19 MSTEVRLRYPIQIQKGQRMSEPQNGRGALFAGGLAAILASTCCLGPLVGV >gi|299856434|gb|ADWV01000017.1| GENE 10 7306 - 7740 195 144 aa, chain + ## HITS:1 COG:SMa0281 KEGG:ns NR:ns ## COG: SMa0281 COG0789 # Protein_GI_number: 16262604 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Sinorhizobium meliloti # 4 132 6 132 134 102 47.0 3e-22 MENNLENLTIGVFAKAAGVNVETIRFYQRKGLLREPDKPYGSIRRYGEADVVRVKFVKSA QRLGFSLDEIAELLRLDDGTHCEEASSLAEHKLKDVREKMADLARMETVLSELVCACHAR KGNVSCPLIASLQGEAGLARSAMP >gi|299856434|gb|ADWV01000017.1| GENE 11 7847 - 8113 230 88 aa, chain - ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 88 80 167 167 171 100.0 3e-43 MATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARL GRKSLSFSKSVELHDKVIGHYLNIKHYQ >gi|299856434|gb|ADWV01000017.1| GENE 12 8586 - 9743 738 385 aa, chain + ## HITS:1 COG:yjiR KEGG:ns NR:ns ## COG: yjiR COG1167 # Protein_GI_number: 16132161 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Escherichia coli K12 # 4 385 89 470 470 775 97.0 0 MAASPWDQVLDMLEAHSDSSIVPLSKSTPDVETPSLKPLWRELSRVVQHNLQTVLGYDLL AGQRVLREQIARLMLDSGSVVTADDIIITSGCHNSMSMALMAVCKPGDIVAVESPCYYGS MQMLRGMGVKVIEIPTDPETGISVEALELALEQWPIKGIILVPNCNNPLGFIMPDARKRA VLSLAQRHDIVIFEDDVYGELATEYPRPRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVA PGRYHDKLLHMKYAISSFNVPSTQMAAATFVLEGHYHRHIRRMRQTYQRNLALYTCWIRE YFPCEICITRPKGGFLLWVELPEQVDMVCVARQLYRMKIQVAAGSIFSASGKYRNCLRIN CALPLSETYREALKQIGEAVYQAME >gi|299856434|gb|ADWV01000017.1| GENE 13 9985 - 10860 469 291 aa, chain - ## HITS:1 COG:ECs5301 KEGG:ns NR:ns ## COG: ECs5301 COG5464 # Protein_GI_number: 15834555 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 227 28 254 260 431 96.0 1e-120 MEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTREGDGYIYVVIEHQSRE DIHMAFRLMRYSMAVMQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFADPTTA RKLYSAAFPLVDVTAVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTEFAND SQITALLNYILLTGDEARFKAFISELTRRMPHHRERIMTIAERIHNDGWLLGRERGRKEG KVEGERSLLRLLLQNGADPEWIQRYTGLSAEQMQALDQPLPESKREPWIEY >gi|299856434|gb|ADWV01000017.1| GENE 14 11408 - 12640 1249 410 aa, chain + ## HITS:1 COG:ECs5300 KEGG:ns NR:ns ## COG: ECs5300 COG0477 # Protein_GI_number: 15834554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 410 1 410 410 710 99.0 0 MPRFFARHAATLFFPMALILYDFAAYLSTDLIQPGIINVVRDFNADVSLAPAAVSLYLAG GMALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMTQFLIARAIQGTSICFIAT VGYVTVQEAFGQTKGIKLMAIITSIVLIAPIIGPLSGAALMHFVHWKVLFAIIAVMGFIS FVGLLLAMPETVKRGAVPFSAKSVFRDFRNVFCNRLFLFGAATISLSYIPMMSWVAVSPV ILIDAGGLTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLII GNLLSPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNMVILMVMSVS VEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLAGLLNRVRQHQAAELAEER >gi|299856434|gb|ADWV01000017.1| GENE 15 12681 - 13961 1210 426 aa, chain + ## HITS:1 COG:yjiN KEGG:ns NR:ns ## COG: yjiN COG2733 # Protein_GI_number: 16132157 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 426 1 426 426 793 99.0 0 MNKLIELRRAKMLALSLLLIAAATFVVTLFLPPNFWVSGVKAIAEAAMVGALADWFAVVA LFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIGNWFS QPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESMTKND RHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAELVSD AVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDPEMAARADAVKSYLKEDEAFNRYLS ELWGDLREWLKADINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAHRVAPE FSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLSQLPAL FPLGNF >gi|299856434|gb|ADWV01000017.1| GENE 16 14077 - 15228 1352 383 aa, chain + ## HITS:1 COG:yjiM KEGG:ns NR:ns ## COG: yjiM COG1775 # Protein_GI_number: 16132156 # Func_class: E Amino acid transport and metabolism # Function: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB # Organism: Escherichia coli K12 # 1 383 8 390 390 789 99.0 0 MSLVTDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCS TSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAE FKPVHVMQLPNSVKDDTSRALWKAEMLRLQKTVEERFGHEISEDALRDAIALKNRERRAL ANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEGQRLDPRP RILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATEQCVAETGDVYDALADKYLAI GCSCVSPNDQRLQMLSQMVEEYQVDGVVDVILQACHTYAVESLAIKRHVRQQHNIPYIAI ETDYSTSDVGQLSTRVAAFIEML >gi|299856434|gb|ADWV01000017.1| GENE 17 15238 - 16005 439 255 aa, chain + ## HITS:1 COG:ECs5297 KEGG:ns NR:ns ## COG: ECs5297 COG1924 # Protein_GI_number: 15834551 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 486 98.0 1e-137 MTYSIGIDSGSTATKGILLADGVITRRFLVPTPFRPATAITEAWETLREGLETTPFLTLT GYGRQLVDFADKQVTEISCHGLGARFLAPATRAVIDIGGQDSKVIQLDDDGNLCDFLMND KCAAGTGRFLEVISRTLGTSVEQLDSITENVTPHAITSMCTVFAESEVISLRSAGVAPEA ILAGVINAMARRSANFIARLSCEAPILFTGGVSHCQTFARMLESHLGMPVNTHPDAQFAG AIGAAVIGQRVRTRR >gi|299856434|gb|ADWV01000017.1| GENE 18 16002 - 16259 207 85 aa, chain + ## HITS:1 COG:no KEGG:EC55989_5000 NR:ns ## KEGG: EC55989_5000 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 85 1 85 85 176 100.0 2e-43 MKEFLFLFHSTVGVIQTRKALQAAGMTFRVSDIPRDLRGGCGLCIWLTCPPGEEIQWVIP GLTESIYCQQDGVWRCIAHYRVSPR >gi|299856434|gb|ADWV01000017.1| GENE 19 16324 - 17184 571 286 aa, chain + ## HITS:1 COG:yjiK KEGG:ns NR:ns ## COG: yjiK COG3204 # Protein_GI_number: 16132154 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 286 38 323 323 553 98.0 1e-157 MTKSISLSKRISVIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNI SSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDER DYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV NGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGE ISLTKGSRGLSHNIKQAEGIAMDASGNIYIVSEPNRFYRFTPKSSH >gi|299856434|gb|ADWV01000017.1| GENE 20 17309 - 18430 926 373 aa, chain + ## HITS:1 COG:yjiJ KEGG:ns NR:ns ## COG: yjiJ COG0477 # Protein_GI_number: 16132153 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 373 20 392 392 547 97.0 1e-155 MLVLTLGMGLGRFLYTPMLPVMMAEGAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPS RLRPFLLVSALASGLLILAMAWLPPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFV LAALFSGVGIGIALGNEYVLAGLHFAFSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAP MPLAKTEQQIMSWWLLAILYGLAGFGYIIVATYLPLMAKDAGSPLLTAHLWTLVGLSIVP GCFGWLWAAKRWGALPCLTANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVM TIARQLSVPGNLNLLGFVTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALI STVQLFKLQVVTS >gi|299856434|gb|ADWV01000017.1| GENE 21 18443 - 18997 461 184 aa, chain - ## HITS:1 COG:kptA KEGG:ns NR:ns ## COG: kptA COG1859 # Protein_GI_number: 16132152 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNA:NAD 2'-phosphotransferase # Organism: Escherichia coli K12 # 1 184 35 218 218 365 99.0 1e-101 MAKYNEKELADTSKFLSFVLRHKPEAIGIVLDREGWADIDKLILCAQKAGKRLTRALLDT VVATSDKKRFSYSSDGRCIRAVQGHSTSQVAISFAEKTPPQFLYHGTASRFLDEIKKQGL IAGERHYVHLSADEATARKVGARHGSPVILTVKAQEMAKRGIPFWQAENGVWLTSTVAVE FLEW >gi|299856434|gb|ADWV01000017.1| GENE 22 19235 - 19930 602 231 aa, chain + ## HITS:1 COG:ECs5288 KEGG:ns NR:ns ## COG: ECs5288 COG3314 # Protein_GI_number: 15834542 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 399 100.0 1e-111 MGIVMTQQGDAVAGELATEKVGIKGYLAFFLTIIFFSGVFSGTDSWWRVFDFSVLNGSFG QLPGANGATTSFRGAGGAGAKDGFLFALELAPSVILSLGIISITDGLGGLRAAQQLMTPV LKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAAYQTSGSAIITNY FSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA >gi|299856434|gb|ADWV01000017.1| GENE 23 19927 - 20388 587 153 aa, chain + ## HITS:1 COG:ECs5287 KEGG:ns NR:ns ## COG: ECs5287 COG0700 # Protein_GI_number: 15834541 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 261 100.0 4e-70 MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKITGLLDWVGHICEPVMA LWGLPGEAATVLLAALMSMGGAVGVAASLATAGALTGHDVTVLLPAMYLMGNPVQNVGRC LGTAEVNAKYYPHIITVCVINALLSIWVMQLIV >gi|299856434|gb|ADWV01000017.1| GENE 24 20401 - 21573 1244 390 aa, chain + ## HITS:1 COG:no KEGG:ECSE_4602 NR:ns ## KEGG: ECSE_4602 # Name: not_defined # Def: isoaspartyl dipeptidase # Organism: E.coli_SE11 # Pathway: not_defined # 1 390 1 390 390 761 100.0 0 MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPDCTVVDLSGQIL CPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKT RALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIGVKCAISDHRSAAPDVYHLAN MAAESRVGGLLGGKPGVTVFHMGDSKKALQPVYDLLENCDVPISKLLPTHVNRNVPLFEQ ALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLT HIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFLNLTGKGEILPGNDADLLVMT PELRIEQVYARGKLMVKDGKACVNGTFETA >gi|299856434|gb|ADWV01000017.1| GENE 25 21638 - 22549 907 303 aa, chain + ## HITS:1 COG:yjiE KEGG:ns NR:ns ## COG: yjiE COG0583 # Protein_GI_number: 16132148 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 303 1 303 303 605 99.0 1e-173 MDDCGAVLHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNR QVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRKIKIAAAHSLSLGLLPSII SQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLEAPFDHIRLFESQLFPVCAS DEHGEALFNLAQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALD GCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI VLS >gi|299856434|gb|ADWV01000017.1| GENE 26 22542 - 22934 189 130 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_4543 NR:ns ## KEGG: ECIAI1_4543 # Name: iraD # Def: DNA replication/recombination/repair protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 130 1 130 130 257 99.0 1e-67 MMRQSLQAVLPEISGNKTSLLRKSVCSDLLTLFNSPHSALPSLLVSGMPEWQVHNQSDKH LQSWYCRQLRSALLFHEPRIAALQVNFKEAYCHILAISLEIMLYHDGEPLTFDLVWDNGG WCSAMLENVS >gi|299856434|gb|ADWV01000017.1| GENE 27 23606 - 24436 472 276 aa, chain + ## HITS:1 COG:no KEGG:ECSE_4598 NR:ns ## KEGG: ECSE_4598 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 276 1 276 276 556 97.0 1e-157 MSMPLSNAANNQFYINNHFLHHPKVDNELTRKYERARLDTENIYLLPLARGNNHNYDGKS VVEIRKLDISKESWPFNYVTEACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHAA TELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPVSQAKRWTN EQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAEIHAKMGYN VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK >gi|299856434|gb|ADWV01000017.1| GENE 28 24577 - 25350 1050 257 aa, chain - ## HITS:1 COG:ECs5283 KEGG:ns NR:ns ## COG: ECs5283 COG2186 # Protein_GI_number: 15834537 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 257 1 257 257 500 100.0 1e-141 MKSATSAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIK GLVEVRRGAGIYVLDSSGSHNTDSPDANVCNDAGPFELLQARQLLESNIAEFAALQATRE DIVKMRQALQLEERELASSAPGSSESGDMQFHLAIAEATHNSMLVELFRQSWQWRENNPM WIQLHSHLDDSLYRKEWLGDHKQILAALIKKDARAAKLAMWQHLENVKQRLLEFSNVDDI YFDGYLFDSWPLDKVDA >gi|299856434|gb|ADWV01000017.1| GENE 29 25565 - 27025 1847 486 aa, chain - ## HITS:1 COG:ECs5282 KEGG:ns NR:ns ## COG: ECs5282 COG0246 # Protein_GI_number: 15834536 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 486 1 486 486 1016 100.0 0 MTTIVDSNLPVARPSWDHSRLESRIVHLGCGAFHRAHQALYTHHLLESTDSDWGICEVNL MPGNDRVLIENLKKQQLLYTVAEKGAESTELKIIGSMKEALHPEIDGCEGILNAMARPQT AIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKSAIGYIVEALRLRREKGLKAF TVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENVTFPCTMVDRIVPAATPETLQEI ADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKVGAQFVADVVPFEMMKLRMLNGSHS FLAYLGYLGGYETIADTMTNPDYRKAAFALMMQEQAPTLSMPEGTDLNAYATLLIERFSN PSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQNGGSWRHLALGVAGWMRYTQGVDEQGNAI DVVDPMLAEFQKINAQYQGADRVKALLGLSGIFADDLPQNADFVGAVTAAYQQLCERGAR ECVAAL >gi|299856434|gb|ADWV01000017.1| GENE 30 27106 - 28290 1507 394 aa, chain - ## HITS:1 COG:uxuA KEGG:ns NR:ns ## COG: uxuA COG1312 # Protein_GI_number: 16132143 # Func_class: G Carbohydrate transport and metabolism # Function: D-mannonate dehydratase # Organism: Escherichia coli K12 # 1 394 1 394 394 812 99.0 0 MEQTWRWYGPNDPVSLADVRQAGATGVVTALHHIPNGEVWSVEEILKRKAIVEDAGLVWS VVESVPIHEDIKTHTGNYEQWIANYQQTLRNLAQCGIRTVCYNFMPVLDWTRTDLEYVLP DGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAVRFATMSDEDKARLTRNIIAG LPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKAIIPVAEEVGVRMAVHPDDPPRP ILGLPRIVSTIEDMQWMVDTVNSMANGFTMCTGSYGVRADNDLVDMIKQFGPRIYFTHLR STMREDNPKTFHEAAHLNGDVDMYEVVKAIVEEEHRRKAEGKEDLIPMRPDHGHQMLDDL KKKTNPGYSAIGRLKGLAEVRGVELAIQRAFFSR >gi|299856434|gb|ADWV01000017.1| GENE 31 28630 - 29973 1647 447 aa, chain + ## HITS:1 COG:ECs5280 KEGG:ns NR:ns ## COG: ECs5280 COG2610 # Protein_GI_number: 15834534 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Escherichia coli O157:H7 # 1 447 1 447 447 702 99.0 0 MHVLNILWVVFGIGLMLVLNLKFKINSMVALLVAALSVGMLAGMDLMSLLHTMKAGFGNT LGELAIIVVFGAVIGKLMVDSGAAHQIAHTLLARLGLRYVQLSVIIIGLIFGLAMFYEVA FIMLAPLVIVIAAEAKIPFLKLAIPAVAAATTAHSLFPPQPGPVALVNAYGADMGMVYIY GVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVDMNNLPSFGVSILVPLIPAIIMI STTIANIWLVKDTPAWEVVNFIGSSPIAMFIAMVVAFVLFGTARGHDMQWVMNAFESAVK SIAMVILIIGAGGVLKQTIIDTGIGDTIGMLMSHGNISPYIMAWLITVLIRLATGQGVVS AMTAAGIISAAILDPATGQLVGVNPALLVLATAAGSNTLTHINDASFWLFKGYFDLSVKD TLKTWGLLELVNSVVGLIIVLIISVVA >gi|299856434|gb|ADWV01000017.1| GENE 32 29878 - 30201 99 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|301328042|ref|ZP_07221201.1| ## NR: gi|301328042|ref|ZP_07221201.1| hypothetical protein HMPREF9535_02853 [Escherichia coli MS 78-1] # 1 41 1 41 41 87 100.0 4e-16 MLVPEALRYQTYKTCTLALCRPDKTRQRRIWHKQSALCWSVPLTLTLSPEGRGDWPGTFL DFVISQSLPMAGSGVLLRYHANNQHNNQPNHGVDQLQQTPGFQRVFY >gi|299856434|gb|ADWV01000017.1| GENE 33 30223 - 31125 610 300 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_4847 NR:ns ## KEGG: EcSMS35_4847 # Name: fimH # Def: protein FimH # Organism: E.coli_SECEC # Pathway: not_defined # 1 300 1 300 300 527 99.0 1e-148 MKRVITLFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVNLAPAVNVGQNLVVDLS TKIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRT DKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPTG GCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSPAQ GVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ >gi|299856434|gb|ADWV01000017.1| GENE 34 31145 - 31648 224 167 aa, chain - ## HITS:1 COG:fimG KEGG:ns NR:ns ## COG: fimG COG3539 # Protein_GI_number: 16132140 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 167 1 167 167 255 100.0 3e-68 MKWCKRGYVLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMS AGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLN TGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS >gi|299856434|gb|ADWV01000017.1| GENE 35 31661 - 32131 122 156 aa, chain - ## HITS:1 COG:fimF KEGG:ns NR:ns ## COG: fimF COG3539 # Protein_GI_number: 16132139 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 156 21 176 176 276 99.0 1e-74 MAADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGN AVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTLT PGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ >gi|299856434|gb|ADWV01000017.1| GENE 36 32201 - 34837 1258 878 aa, chain - ## HITS:1 COG:ECs5276 KEGG:ns NR:ns ## COG: ECs5276 COG3188 # Protein_GI_number: 15834530 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 878 1 878 878 1721 99.0 0 MSYLNLRLYQRNTQCLHIRKHRLAGFFVRLVVACAFAAQAPLSSAELYFNPRFLADDPQA VADLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQLASMGLN TASVSGMNLLADDACVPLTSIIHDATAHLDVGQQRLNLTIPQAFMSNRARGYIPPELWDP GINAGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSK NKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPV IHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTV PYSSVPLLQREGHTRYSITAGEYRSGNAQQEKPRFFQSTLLHGLPAGWTIYGGTQLADRY RAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYR YSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRS STLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNI PFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGD GNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLAHANGVTLGQPLNDTVVL VKAPGAKDAKVENQTGVRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVP TRGAIVRAEFKARVGIKLLMTLTHNNKPLPFGAMVTSESSQSSGIVADNGQVYLSGMPLA GKVQVKWGEEENAHCVANYQLPPESQQQLLTQLSAECR >gi|299856434|gb|ADWV01000017.1| GENE 37 34904 - 35629 518 241 aa, chain - ## HITS:1 COG:ECs5275 KEGG:ns NR:ns ## COG: ECs5275 COG3121 # Protein_GI_number: 15834529 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 # 1 241 1 241 241 457 99.0 1e-129 MSNKNVNVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATRVIYPAGQKQVQLAVTN NDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFW MNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLIN PTPYYLTVTELNAGARVLENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVM E >gi|299856434|gb|ADWV01000017.1| GENE 38 35666 - 36205 307 179 aa, chain - ## HITS:1 COG:fimI KEGG:ns NR:ns ## COG: fimI COG3539 # Protein_GI_number: 16132136 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 179 37 215 215 368 99.0 1e-102 MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMKFQGVIIAETCRIEAGDKQMTVNMGQIS SNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIG VALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ >gi|299856434|gb|ADWV01000017.1| GENE 39 36270 - 36818 456 182 aa, chain - ## HITS:1 COG:ECs5273 KEGG:ns NR:ns ## COG: ECs5273 COG3539 # Protein_GI_number: 15834527 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 182 1 182 182 218 90.0 7e-57 MKIKTLAIVVLSALSLSSAAALADTTTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQV RTASLAQEGATSSAVGFNIQLNDCDTTVADKAAIAFLGTAIDGTHPNVLALQSSAAGSAT KVGVQILDRTGAALALDGATFSAQTTLNNGTNTIPFQARYFATGAATPGAANADATFKVQ YQ >gi|299856434|gb|ADWV01000017.1| GENE 40 37299 - 37895 347 198 aa, chain - ## HITS:1 COG:fimE KEGG:ns NR:ns ## COG: fimE COG0582 # Protein_GI_number: 16132134 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 1 198 1 198 198 367 100.0 1e-102 MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISELLDLHYQDLDLNEGRI NIRRLKNGFSTVHPLRFDEREAVERWTQERANWKGADRTDAIFISRRGSRLSRQQAYRII RDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFA GLWERNNLINEKLKREEV >gi|299856434|gb|ADWV01000017.1| GENE 41 38373 - 38975 24 200 aa, chain - ## HITS:1 COG:ECs5271 KEGG:ns NR:ns ## COG: ECs5271 COG0582 # Protein_GI_number: 15834525 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 1 200 1 200 200 402 100.0 1e-112 MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDID LKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQ FYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASN AGRFYGIWDRARGRQRHAVL >gi|299856434|gb|ADWV01000017.1| GENE 42 39236 - 39457 74 73 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_4918 NR:ns ## KEGG: ECUMN_4918 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 73 1 73 131 130 98.0 1e-29 MQLILSIYHVICSVTSKINIKNSAKFNIRSTSRLTYDIISQLHLPQNGYFMERSNFLVAI IMLILRSLAIIPG >gi|299856434|gb|ADWV01000017.1| GENE 43 40432 - 41148 506 238 aa, chain + ## HITS:1 COG:no KEGG:G2583_5112 NR:ns ## KEGG: G2583_5112 # Name: nanC # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 238 4 241 241 452 99.0 1e-126 MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLKVSEGWQNGWWASMESN TWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHFSSKGTRYGPYVKLSWDAT KDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDY RYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGVYNGRDNLSENSYRIGVSFKL >gi|299856434|gb|ADWV01000017.1| GENE 44 41168 - 42274 557 368 aa, chain + ## HITS:1 COG:yjhT KEGG:ns NR:ns ## COG: yjhT COG3055 # Protein_GI_number: 16132131 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 368 37 404 404 699 98.0 0 MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAK DKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSKGLTQVFNDVHKYNPKTNSWVKL MSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSATIDKINAHYFDKKA EDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAALVNKGDKTWLINGEAKPGLRTDAVFE LDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGL KKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLISVK DNKVTVQN >gi|299856434|gb|ADWV01000017.1| GENE 45 42339 - 43319 94 326 aa, chain + ## HITS:1 COG:yjhS KEGG:ns NR:ns ## COG: yjhS COG2801 # Protein_GI_number: 16132130 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 326 1 326 326 666 97.0 0 MNAIISPDYYYVLTVAGQSNAMAYGEGLPLPDREDAPHPRIKQLARFAHTHPGGPSCHFN DIIPLTHCPHDVQDMQGYHHPLATNHQTQYGTVGQALHIARKLLPSIPDNAGVLIVPCCR GGSAFIAGSEGTYSERHGASHDACRWGSDTPLYQDLVSRTRAALAKNPQNKFLGVCWMQG EFDLMTSDYASHPQHFNHMVEAFRRDLKQYHSQLNNITDAPWFCGDTTWYWKENFPHSYE AIYGNYQNNVLANIIFVDFQQQGERGLTNAPDEDPDDLSTGYYGSAYRSPENWTTALRSS HFSTAARRGVISDRFVEAILQFWREK >gi|299856434|gb|ADWV01000017.1| GENE 46 43531 - 44403 460 290 aa, chain + ## HITS:1 COG:Z5892 KEGG:ns NR:ns ## COG: Z5892 COG3440 # Protein_GI_number: 15804871 # Func_class: V Defense mechanisms # Function: Predicted restriction endonuclease # Organism: Escherichia coli O157:H7 EDL933 # 1 280 12 291 294 579 97.0 1e-165 MASSKSLQQAIANIKIWHKGEQRAPHKPLLLLYVLAGYLNGHPRLFDYGSEIYEPLHSLL ERFGPQRSHYRPDMPFWRLQGDGFWQLHNAELCSTAGSSRQPPVKELNEYHVAGGFDEQH YALVTGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQQIRKQRDPLFRKNVLRAYNY QCAICGFNMRHDDTTVALEAAHIKWKQQGGPCEIPNGLALCAIHHKAFDKGSIGLDENMR VLVSDAVNGGGIVERLFWDFDGKTIALPQVRKNYPYEVFVEWHRKEVFRG >gi|299856434|gb|ADWV01000017.1| GENE 47 44573 - 46648 836 691 aa, chain + ## HITS:1 COG:YPO0387 KEGG:ns NR:ns ## COG: YPO0387 COG1401 # Protein_GI_number: 16120721 # Func_class: V Defense mechanisms # Function: GTPase subunit of restriction endonuclease # Organism: Yersinia pestis # 436 680 436 680 687 250 53.0 5e-66 MTLVDSVEAGRLTISELIDALAKDKNYTASRWYQRYRAFTTLLQQTSTFAEPATDGLVKQ LWYERDNGIASIRQGVPSLAEYQQSLPLLRELTERIRQQPDEETYQYVGNALQQAKENGL LKRMYWSLRNRVFAAFSPENYTSTVDENAFNKAAEFLNQHFHLGLVLTGNWLQKNYELKQ AIHAQSPDTDPYYVNMAIWHLYELLRERDNEQKQEKVASTTSITRSEPIENKIILHSPTN VIFFGPPGTGKTFRLQQKMKEYTSHAVPADRDAWLDSRLESLNWMQVITLVLLDLGKRAK VRQIIEHMWFQRKALLNGRNGNLSNTAWAALQSYTVPESLTVDYKNRREPAVFNKTDNSE WFLVDSQLEQVEDLVELYAELKRGPKSAEAIQRFAVVTFHQSYGYEEFIEGIRARSDESG NISYPIEPGIFMRLCQRANADPGHRYAIFIDEINRGNISKIFGELISLIEVDKRAGMPNA MSLQLAYSGDHFSVPGNVDIIGAMNTADRSLALMDTALRRRFDFVEMMPDLSLLSEAKVK GIELESLLEKLNSRIEALYDREHTLGHAFFMPVKNALDAGDEEAAFKQLKIAFQKKIIPL LQEYFFDDWNKIRLVLADNQKQDDNLQFVIEKTDDLDTLFGNNHGLRRHDQQSTAYELKD FDQEIWNIPQAYRSIYQPQQTPLDEQAVNHG >gi|299856434|gb|ADWV01000017.1| GENE 48 46641 - 47984 279 447 aa, chain + ## HITS:1 COG:YPO0388 KEGG:ns NR:ns ## COG: YPO0388 COG4268 # Protein_GI_number: 16120722 # Func_class: V Defense mechanisms # Function: McrBC 5-methylcytosine restriction system component # Organism: Yersinia pestis # 6 411 8 420 438 305 42.0 1e-82 MGEVISVFEYDLLGSGKAASVGAKPVPPQVFNYLEALSLASNQGSQFLKLTSRSGFKLLQ VQNYAGMLSTPHGFQLEILPKVGKNLTAANARQTLLTMLSHLPGFRHIQTQQATLQAQRM PLLEIFINQFLHSVSQLLKQGLRSDYVSKQGNLAFMKGKLMLSAQLRHNAVNRHKFCVDY DDYMPDCAANRLLHSALDKLLSLQLSSDNQRWLYELRFAFDGIPLSRDIERDINNLRLER GMAHYNEPMAWAQLILRGMSPSALQGNTKAISLLFPMEAVFESFVAQTLPDELPPHLKVL PQAATYSLVKHGLKDCFKLRPDLLIQSHKPVQTEMVMDTKWKLVNSSQQTKSLYGLAQAD FYQMFAYGQKYLGGNGEMYLIYPAHDDFSQPIAQHFAFSETLKLWVVPYRIMAKRGERMM WPNDVSCTMSPKLDRMAASVSYSGGMR >gi|299856434|gb|ADWV01000017.1| GENE 49 47981 - 48367 117 128 aa, chain + ## HITS:1 COG:no KEGG:EFER_3103 NR:ns ## KEGG: EFER_3103 # Name: not_defined # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 1 128 1 128 128 206 100.0 2e-52 MTHEYQRQSLEQLITQQTATPRSAAVVFNENQTLWQTLGFSQSQVSLWLASLPQSNHLKG PTTATYQVIPDIAAHLVSLLHQAGGRMPLAQVLKKLPAGITTSEQQIRKLAQKHAQIEIK GPLLVLIN >gi|299856434|gb|ADWV01000017.1| GENE 50 48418 - 48879 448 153 aa, chain + ## HITS:1 COG:no KEGG:EFER_3102 NR:ns ## KEGG: EFER_3102 # Name: not_defined # Def: putative type I restriction-modification system methyltransferase subunit # Organism: E.fergusonii # Pathway: not_defined # 1 151 1 151 715 309 98.0 2e-83 MAKEAKKQDPQQQLEALFNKLVKQHSEFTQPLVELPEHEFAKAGLIQGLVEGNLTPPVML IALTEGHWEYAADTAKFDDLAYQLLSDIEGDWPVYAVVDDGLNQRILALFGADGSDGTHG ADTLPGLEELRSFDRMERDPTFRWSMRVYQKSF >gi|299856434|gb|ADWV01000017.1| GENE 51 49297 - 50145 280 282 aa, chain + ## HITS:1 COG:no KEGG:EFER_3098 NR:ns ## KEGG: EFER_3098 # Name: not_defined # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 1 282 10 291 291 522 95.0 1e-147 MSRYLSAALASNRKGRFLQTVAGATPLMKDWISSPPASGLLIVQAEELTDANTMQHLYHW AMQAGCAALVINLKAEQFTLLAQLPYPLDWQLVPASLRGQEPGLTALLASETDQAIAGFT GSADRYQHQAGDVVHTRYIRKHSNSGLLAFTTLPLWSLTLLDHSELLVSWLNWFVDHAGI AERIIEPKAPSTDYTPDKHDLVVLLLLYAGGGMNLQALSEHNAVKLMFDVNSLDIVKRGE MLRQHDFIDDAGITATGKTCLQASQYWAYAPLLGEQLHTGTL >gi|299856434|gb|ADWV01000017.1| GENE 52 50148 - 51305 754 385 aa, chain + ## HITS:1 COG:no KEGG:EFER_3097 NR:ns ## KEGG: EFER_3097 # Name: not_defined # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 1 385 1 385 385 743 99.0 0 MNENKTMNLAQSLAIDSQLRLPGSAGRLLKQVRDIEQVAPLFRDAGLVKAVPKPTIVNLR VAGIATKSCLDKVLGGFIYASAAVRTDLLIDDNKVSTVGSDSVSELDDIDFEAQRKRLDL IEIRQAYQLVEKKLLGYEPGDLILLDTPLFLARDMAPLERNVRHKQEYEKTRQVIETFWQ NHRSRIFPWNQNGVVLASILAERFSAIVSIAKQDLRTEQGRKQILASDGFSKELMQNLEG LDESLVGVGDLRFINGILGNYSRTIAFRLSEQEKRIEPNIEAKQGLIGFHFRSARGGQIK MVQLAGDEPEWKSADLDLVASRLMVLDMQNKGNAMPLPQLLGYQQLGILPKFATFYRQGL HQALKNNDIEAGWLAGLDEGLNNGL >gi|299856434|gb|ADWV01000017.1| GENE 53 51295 - 52980 1012 561 aa, chain + ## HITS:1 COG:MK0692 KEGG:ns NR:ns ## COG: MK0692 COG0433 # Protein_GI_number: 20094129 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Methanopyrus kandleri AV19 # 50 555 50 510 527 195 30.0 2e-49 MAYKVLGKLVGNTGDASQLTMVVQDSFSVRRGEFVRIMHQERKDEGQVAVLGRVTKISRT NMLYNAGFGDGVTELELLPGANVTGENMFAQVELVGYRDPVTRQIKIPRRPLNPGTAVET VDFQFLSDFYEFNEHSSLHLGNLVGYDKGENTVPVFIDVNKLVTEHLAVLAMTGSGKSYT VGRIIERLVAVNNGTVVVFDPHGEYGKALAGGNLQFSSFLEATDDKRDQEALPLIKQTFE KLQAAGAGIQVYSPQHESFKHKYASKNTPLALQFDHFEMDDIAEILPGLTEPQQRVLDVA IRYWRSADKTEPRDINRLRFLLGDGIEELKEWDDLSEAEAKALSGRSAAVASMKLSRVLN EAKSFYSATMAEPTDIYKMVGRPSNQQGRLVVVDLQGLSDTAKQVICALLSSEILKAASS KTDPLRPCFIIYEEGHNFAPAGGNAVSHRIIKKIAGEGRKFGVGFGIVSQRPSKLDSDVT SQCNTLITMRLKNPDDQRFIAKASDMVSKADLEELPSLSTGEALVCGRSIPAPLLVKVGS KALIHGGESPEVLRVWGSFSG >gi|299856434|gb|ADWV01000017.1| GENE 54 52988 - 53530 201 180 aa, chain + ## HITS:1 COG:no KEGG:EFER_3095 NR:ns ## KEGG: EFER_3095 # Name: not_defined # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 1 180 20 199 199 376 99.0 1e-103 MPEVAWVNETFPLLASGKLLDQDVLVHSLGCSVWNTFGHEQSFMAVVECPAPGTFGADIR SDSGWFHKSSASPVCLIEFERFDGSAKGQQKLEEKLKNLLEAAQRWNHCPKTLVLSAWSQ GLVGVPDTQKLKDICRMGFTSSTGTQVIAAPDVEVVFSRFLFIKNLNMIVLDRIHYEVLM >gi|299856434|gb|ADWV01000017.1| GENE 55 53551 - 54996 591 481 aa, chain + ## HITS:1 COG:all4518 KEGG:ns NR:ns ## COG: all4518 COG0515 # Protein_GI_number: 17232010 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Nostoc sp. PCC 7120 # 2 279 4 298 520 110 31.0 8e-24 MPGTNKRLGDKYLLLECLGDGSHGWVWRAERLKDGKIVAVKIPKDITREDRQLAEGKELL NVEPHENIVQIFDMGRIDNEWFYIEMEYFPSQTLAQKLDDRQRNFGQTYERLFRIYRQVL CAVHYLAELPVPISHGDIKPHNILVGERDLVKLTDFGSSALPEEIYVRTRENGGTVLYSA PEFSNVDSRRGSLEELLLGDIYSLGVLLYQLLTGKLPHDTPAQVQRHAPFKLPTEINSSI HTDLEQVVLTCLQKRAEDRFSTISDLIHAFDSAATKQLKVGAIAPVFQTKPAQDWSSAVL EAMSDQSYQKAAQLASQEYSRSKDLQALHQQLIALYRANRLFDFEKVVEDNKAILLEGKL TQPAALFELIVKANLQLRNISQANFWLLQRKQAEAENAATMYLESSILGLEAKYSEARVL LEKVNQTTPMKFHVLSQLILVCEQMRDYSGAAAYLKAALRVAPLDNSMKEKKELYAKLGV I >gi|299856434|gb|ADWV01000017.1| GENE 56 55198 - 56319 383 373 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 1 354 60 402 406 152 29 9e-36 KMLALGKYPEVSLVDARGRRDEARKLLANGVDPSENKKAVKVEHEQEVITFEVVAREWHA SNQKWSASHSARVLKSLEDNLFAAIGKRNIADLKTRDLLVPIKAVESSGRLEVAARLQQH TTAIIRFAVHSGLIDYNPAQEIAGAVATAKRQHRAALELNRIPELLQRIYHYSGRPLTRL AVELTLLVFIRSSELRFARWSEVDFDTAMWTIPGEREPLEGVKHSQRGSKMRTPHLVPLS RQALTILEKIKSMSGNRELIFVGDHDPRKPMSENTLNKALRVMGYDTKTEVCGHGFRTMA CSSLIESGLWSRDAVERQMSHQERSSVRAAYIHKAEHLGERMLMLQWWADYLDANRMAAI TPFDYAKINSSFR >gi|299856434|gb|ADWV01000017.1| GENE 57 56238 - 56462 141 74 aa, chain - ## HITS:1 COG:YPO3438 KEGG:ns NR:ns ## COG: YPO3438 COG0582 # Protein_GI_number: 16123586 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Yersinia pestis # 1 30 1 30 419 59 96.0 2e-09 MALSDVKVRSAKPEAKAYKLTDGEGMVLLVTLMAPNTGDFVIVLAVRRRCWRWGNTLKSR WSMPEVAGMKPVSC >gi|299856434|gb|ADWV01000017.1| GENE 58 56944 - 57963 1240 339 aa, chain + ## HITS:1 COG:yjgB KEGG:ns NR:ns ## COG: yjgB COG1064 # Protein_GI_number: 16132091 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli K12 # 1 339 15 353 353 675 98.0 0 MSMIKCYAAKEAGGELEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLV AGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMN RGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGL GHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVN VSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSISGSATGTPYELRKLMRFA ARSKVAPTTELFPMSKINDAIKHVRDGKARYRVVLKADF >gi|299856434|gb|ADWV01000017.1| GENE 59 58093 - 59595 1532 500 aa, chain + ## HITS:1 COG:yjgR KEGG:ns NR:ns ## COG: yjgR COG0433 # Protein_GI_number: 16132085 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli K12 # 1 500 1 500 500 949 99.0 0 MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVK GDLTGVAQAGTASEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLL ARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV GAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDTNGKGVINILSAEKLYQMPKLYAASLL WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGE ALISFLDVKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDEVDRESAYEM LQKGVQASAEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAAR QVTNQIVRGMLGSLLGGRRR >gi|299856434|gb|ADWV01000017.1| GENE 60 59714 - 60796 1400 360 aa, chain - ## HITS:1 COG:ECs5239 KEGG:ns NR:ns ## COG: ECs5239 COG0795 # Protein_GI_number: 15834493 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 360 2 361 361 659 100.0 0 MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSV PKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAI GEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAF NENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLG VVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPL RSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS >gi|299856434|gb|ADWV01000017.1| GENE 61 60796 - 61875 974 359 aa, chain - ## HITS:1 COG:ECs5238 KEGG:ns NR:ns ## COG: ECs5238 COG0795 # Protein_GI_number: 15834492 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 359 8 366 366 621 99.0 1e-178 MRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLS LFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRH QDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSV VVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTD QMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYL LFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV >gi|299856434|gb|ADWV01000017.1| GENE 62 62163 - 63674 1700 503 aa, chain + ## HITS:1 COG:ECs5237 KEGG:ns NR:ns ## COG: ECs5237 COG0260 # Protein_GI_number: 15834491 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Escherichia coli O157:H7 # 1 503 1 503 503 1002 100.0 0 MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTL LLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGR NNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAI AAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVG QGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAV YGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLC DVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRL PLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKG ATGRPVALLAQFLLNRAGFNGEE >gi|299856434|gb|ADWV01000017.1| GENE 63 63808 - 64251 429 147 aa, chain + ## HITS:1 COG:ECs5236 KEGG:ns NR:ns ## COG: ECs5236 COG2927 # Protein_GI_number: 15834490 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, chi subunit # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 290 100.0 9e-79 MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYE DSLKQLARERYKAYRVAGFNLNTATWK >gi|299856434|gb|ADWV01000017.1| GENE 64 64251 - 67106 3342 951 aa, chain + ## HITS:1 COG:valS KEGG:ns NR:ns ## COG: valS COG0525 # Protein_GI_number: 16132080 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 951 1 951 951 1939 100.0 0 MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMD TMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAE SGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLR TAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDP RYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINI LTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPH DLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDI QDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSA LWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHT VYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEK QFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQD CGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELT KPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQP FPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNEN RGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIE GEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL >gi|299856434|gb|ADWV01000017.1| GENE 65 67161 - 68357 501 398 aa, chain - ## HITS:1 COG:ECs5234 KEGG:ns NR:ns ## COG: ECs5234 COG4269 # Protein_GI_number: 15834488 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 398 1 398 398 645 97.0 0 MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEV NGQRFSYGITGGNVFVSCLVFVFCYFAILMTVSADMPLVGCVLTLLLLVLLIFMAAKGLR YQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFISTKMLHANSSSSVIISV VLIAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPF LAVAGYIIIDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVS LRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKN TYLLGDLDDLPLINKEEQPDKGFLARISRGIMPSLPFL >gi|299856434|gb|ADWV01000017.1| GENE 66 68550 - 69053 591 167 aa, chain + ## HITS:1 COG:STM4473 KEGG:ns NR:ns ## COG: STM4473 COG0454 # Protein_GI_number: 16767718 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 1 167 1 167 167 261 79.0 4e-70 MNNIAPQSPVMRRLTQQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGH AYWVVEYDGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMG FKRCYLETTAFLKEAIGLYEHLGFQHIDYALGCTGHVDCEVRMLREL >gi|299856434|gb|ADWV01000017.1| GENE 67 69099 - 69515 754 138 aa, chain - ## HITS:1 COG:ECs5232 KEGG:ns NR:ns ## COG: ECs5232 COG3076 # Protein_GI_number: 15834486 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 138 1 138 138 187 100.0 5e-48 MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEV TDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNG EDGDDEDFVDEDDDGVRH >gi|299856434|gb|ADWV01000017.1| GENE 68 69677 - 70681 1096 334 aa, chain + ## HITS:1 COG:ECs5231 KEGG:ns NR:ns ## COG: ECs5231 COG0078 # Protein_GI_number: 15834485 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 671 99.0 0 MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTR CSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEY AGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALT GLDLRLVAPQACWPEAALVTECRTLAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEA KEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGME VTDEVFESAASIVFDQAENRMHTIKAVMVATLSK >gi|299856434|gb|ADWV01000017.1| GENE 69 70782 - 71012 302 76 aa, chain - ## HITS:1 COG:no KEGG:ECS88_4840 NR:ns ## KEGG: ECS88_4840 # Name: not_defined # Def: conserved hypothetical protein; length varies in various strains; absent from some # Organism: E.coli_S88 # Pathway: not_defined # 1 72 444 515 527 133 91.0 2e-30 MKQPDFAKWYFYQLLKDYEGEQLYLNELGYVYGNEEKTNEIVKNNPGYVVKIFEEKMVNE LKIRTRMMKILRKIYV >gi|299856434|gb|ADWV01000017.1| GENE 70 70999 - 72342 686 447 aa, chain - ## HITS:1 COG:no KEGG:B21_04083 NR:ns ## KEGG: B21_04083 # Name: yjgL # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 443 1 443 550 749 90.0 0 MSKISGWNFSQNITSADNCKQKNEDLDTWYVGMNDFARIAGGQNSRSNILSPRAFLEFLA KMFTLGYVDFSKRSNEAGRNMMAHIKSSSYIKNNDGSEIMKFVMNNPEGERADLSKVEIE ITLASAFNNGIREGHTVIIFPQPDGSTNRYEGKSFERKDESSLHLITNKILACYQREANK EIARLLNISQELNNSQDLNNSQVSCKDSVDSTITDLLEKPLNNALLAIRKEHLLLMPYVC NESISYLLGEKGILKEIDDLNAVNNYLLNNKKATDNEINDIKVNLSHILIASLDDAKVNL TPVIDSILEIFLKFPYINDVRILDWCFNKRMQYFGDSEKIKYACSVINHIDFSRDQSKDF SCDQSKIKIAETLFFNLDKEHYKNSRKLQELIWDKLVAYVNDFNLSNQEKSRLILRLFDD VKLLFNEVPVSILVNDIFFEGFFHEAT >gi|299856434|gb|ADWV01000017.1| GENE 71 72465 - 72917 599 150 aa, chain - ## HITS:1 COG:ECs5229 KEGG:ns NR:ns ## COG: ECs5229 COG2731 # Protein_GI_number: 15834483 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli O157:H7 # 1 150 4 153 153 304 99.0 4e-83 MIIGNIHNLQPWLPQELRQAIEHIKAHVTVETPKGKHDIEGNRLFYLISEDMTEPYEARR AEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFV VFYPGEVHKPLCAVGAPAQVRKAVVKMLMA >gi|299856434|gb|ADWV01000017.1| GENE 72 73062 - 73655 310 197 aa, chain - ## HITS:1 COG:STM1674 KEGG:ns NR:ns ## COG: STM1674 COG1309 # Protein_GI_number: 16765017 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 2 197 1 196 196 214 55.0 6e-56 MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSK AGLFSRVLNEYVGTEAIPLVDILRDDRPVGECLAEVLKEAARRYSQNGGCAGCMVLEGIH SHDPQARDIAVQYYHAAETAIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSLEQL CATAALAGGAIKTILKE >gi|299856434|gb|ADWV01000017.1| GENE 73 73726 - 74439 271 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 234 4 239 242 108 35 8e-23 MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVFTDS ADRDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRLFKINIHAPYHASVEAARQ MPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPID TDANPANGPMRDMLHGFMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA >gi|299856434|gb|ADWV01000017.1| GENE 74 74570 - 74965 260 131 aa, chain + ## HITS:1 COG:yjgH KEGG:ns NR:ns ## COG: yjgH COG0251 # Protein_GI_number: 16132070 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 131 1 131 131 264 99.0 4e-71 MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNL HATLAAAGCTFDDIIDVTSFHTDPEKQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDF EIKVIARIPEQ >gi|299856434|gb|ADWV01000017.1| GENE 75 75384 - 76319 1042 311 aa, chain + ## HITS:1 COG:ECs5222 KEGG:ns NR:ns ## COG: ECs5222 COG0540 # Protein_GI_number: 15834476 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Escherichia coli O157:H7 # 1 311 1 311 311 613 100.0 1e-176 MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSF ETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFS GNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKF DGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSE YANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQAL LALVLNRDLVL >gi|299856434|gb|ADWV01000017.1| GENE 76 76332 - 76793 548 153 aa, chain + ## HITS:1 COG:ECs5221 KEGG:ns NR:ns ## COG: ECs5221 COG1781 # Protein_GI_number: 15834475 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Escherichia coli O157:H7 # 1 153 1 153 153 304 100.0 5e-83 MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIK IENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEP VSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN >gi|299856434|gb|ADWV01000017.1| GENE 77 76866 - 77252 568 128 aa, chain + ## HITS:1 COG:ECs5220 KEGG:ns NR:ns ## COG: ECs5220 COG0251 # Protein_GI_number: 15834474 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli O157:H7 # 1 128 14 141 141 228 100.0 2e-60 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAI VEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIE IEAIAVRR >gi|299856434|gb|ADWV01000017.1| GENE 78 77458 - 80154 2848 898 aa, chain - ## HITS:1 COG:ECs5219 KEGG:ns NR:ns ## COG: ECs5219 COG0474 # Protein_GI_number: 15834473 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Escherichia coli O157:H7 # 1 898 1 898 898 1816 100.0 0 MFKEIFTRLIRHLPSRLVHRDPLPGAQQTVNTVVPPSLSAHCLKMAVMPEEELWKTFDTH PEGLNQAEVESAREQHGENKLPAQQPSPWWVHLWVCYRNPFNILLTILGAISYATEDLFA AGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLV PGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKAATTRQPEHSNPLECDTLC FMGTTVVSGTAQAMVIATGANTWFGQLAGRVSEQESEPNAFQQGISRVSMLLIRFMLVMA PVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDA IQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTA VLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQ VRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGY IAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGEVVIGSDIETLS DDELANLAQRTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDG AVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL PFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFD ILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLMIM TVIVMIVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYGWQ >gi|299856434|gb|ADWV01000017.1| GENE 79 80533 - 81480 781 315 aa, chain + ## HITS:1 COG:treR KEGG:ns NR:ns ## COG: treR COG1609 # Protein_GI_number: 16132063 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 315 1 315 315 619 99.0 1e-177 MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQ SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT GRSEPQQIIIPATLS >gi|299856434|gb|ADWV01000017.1| GENE 80 81602 - 83020 1524 472 aa, chain + ## HITS:1 COG:ECs5217_2 KEGG:ns NR:ns ## COG: ECs5217_2 COG1263 # Protein_GI_number: 15834471 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli O157:H7 # 92 472 1 381 381 690 100.0 0 MSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANARPKEIEQLPMVKGCFTNA GQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARQNMKWHEQLISHFAEIFFPLLPA LISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFLWLIGEAIFFYLPVGICWSAVK KMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDFGMFSIAKVGYQAQVIPALLAGLA LGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHALIGPFGRMIGDGVAFAVRHLMTGSF APIGAALFGFLYAPLVITGVHQTTLAIDLQMIQSMGGTPVWPLIALSNIAQGSAVIGIII SSRKHNEREISVPAAISAWLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVMAN GIGVGGLPGILSIQPSYWQVFALAMAIAIIIPIVLTSFIYQRKYRLGTLDIV >gi|299856434|gb|ADWV01000017.1| GENE 81 83070 - 84725 1526 551 aa, chain + ## HITS:1 COG:ECs5216 KEGG:ns NR:ns ## COG: ECs5216 COG0366 # Protein_GI_number: 15834470 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli O157:H7 # 1 551 1 551 551 1133 99.0 0 MTNLPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQRLDYLHKLGVDAIWLTPFYVSPQ VDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMVFNHTSTQHAWFREALNKE SPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRA ELKKVCEFWADRGVDGLRLDVVNLISKDPRFPEDLDGDGRRFYTDGPRAHEFLHEMNRDV FTPRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFNFHHLKVDYPGGEKWTLAKPDFVAL KTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAMVLHGMQGTPYI YQGEEIGMTNPHFTRITDYRDVESLNMFAELRNDGRDADELLAILASKSRDNSRTPMQWS NGDNAGFTAGEPWIGLGDNYQKINVEAALADESSVFYTYQKLIALRKQEAILTWGNYQDL LPNSPVLWCYRREWKGQTLLVIANLSREIQPWQPGQMRGNWQLVMHNYEEASPQPCAMNL RPFEAVWWLQK >gi|299856434|gb|ADWV01000017.1| GENE 82 85119 - 87257 2503 712 aa, chain + ## HITS:1 COG:nrdD KEGG:ns NR:ns ## COG: nrdD COG1328 # Protein_GI_number: 16132060 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Escherichia coli K12 # 1 712 1 712 712 1504 99.0 0 MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINE IQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNSSLLNENANK DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVKAHERGDIHYHDLDYSPFFPMFNCMLIDL KGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASY NKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS WESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKR MYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEA KGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIF KNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFS LYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPL ANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGF TCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG >gi|299856434|gb|ADWV01000017.1| GENE 83 87415 - 87879 397 154 aa, chain + ## HITS:1 COG:ECs5214 KEGG:ns NR:ns ## COG: ECs5214 COG0602 # Protein_GI_number: 15834468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 323 99.0 5e-89 MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSGQPFTKAMEDQIINDLN DTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIWVWTGYKLDELNATQMQVV DLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR >gi|299856434|gb|ADWV01000017.1| GENE 84 87924 - 88310 573 128 aa, chain - ## HITS:1 COG:STM4439 KEGG:ns NR:ns ## COG: STM4439 COG3783 # Protein_GI_number: 16767685 # Func_class: C Energy production and conversion # Function: Soluble cytochrome b562 # Organism: Salmonella typhimurium LT2 # 1 128 1 128 128 174 85.0 3e-44 MRKSLLAILAVSSLVFSSASFAADLEDNMETLNDNLKVIEKADNAAQVKDALTMMRAAAL DAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTR NAYHQKYR >gi|299856434|gb|ADWV01000017.1| GENE 85 88493 - 89845 1409 450 aa, chain - ## HITS:1 COG:ECs5212 KEGG:ns NR:ns ## COG: ECs5212 COG0312 # Protein_GI_number: 15834466 # Func_class: R General function prediction only # Function: Predicted Zn-dependent proteases and their inactivated homologs # Organism: Escherichia coli O157:H7 # 1 450 1 450 450 885 100.0 0 MALAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEF NSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFD APDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKVFGNSHGMLQ GYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTLSRLSPRKLS TMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLKG LASTPFDSEGVRTERRDIIKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWRIAGQGLSF EQMLKEMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWR NIVTVGNDIETRSNIQCGSVLLPEMKIAGQ >gi|299856434|gb|ADWV01000017.1| GENE 86 89939 - 90490 771 183 aa, chain + ## HITS:1 COG:ECs5211 KEGG:ns NR:ns ## COG: ECs5211 COG3028 # Protein_GI_number: 15834465 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 183 1 183 183 271 100.0 7e-73 MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLD ADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLEN LRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKEGNKPPKSARQIFQYLRELAE NEG >gi|299856434|gb|ADWV01000017.1| GENE 87 90641 - 92014 1661 457 aa, chain - ## HITS:1 COG:ZyjfG KEGG:ns NR:ns ## COG: ZyjfG COG0773 # Protein_GI_number: 15804823 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Escherichia coli O157:H7 EDL933 # 1 457 1 457 457 953 100.0 0 MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEKQGIELIQGYDASQLDP QPDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRDRWVLAVAGTHGKTTTAGM ATWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEADEYDCAFFDKRSKFVHYCPRT LILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRIIWPENDINLKQTMAMGCWSEQEL VGEQGHWQAKKLTTDASEWEVLLDGEKVGEVKWSLVGEHNMHNGLMAIAAARHVGVAPAD AANALGSFINARRRLELRGEANGVTVYDDFAHHPTAILATLAALRGKVGGTARIIAVLEP RSNTMKMGICKDDLAPSLGRADEVFLLQPAHIPWQVAEVAEACVQPAHWSGDVDTLADMV VKTAQPGDHILVMSNGGFGGIHQKLLDGLAKKAEAAQ >gi|299856434|gb|ADWV01000017.1| GENE 88 92190 - 93188 1125 332 aa, chain + ## HITS:1 COG:fbp KEGG:ns NR:ns ## COG: fbp COG0158 # Protein_GI_number: 16132054 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase # Organism: Escherichia coli K12 # 1 332 1 332 332 685 100.0 0 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGE VQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDV NVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTY DPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYI GSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDI IPETLHQRRSFFVGNDHMVEDVERFIREFPDA >gi|299856434|gb|ADWV01000017.1| GENE 89 93221 - 94216 1197 331 aa, chain - ## HITS:1 COG:yjfF KEGG:ns NR:ns ## COG: yjfF COG1172 # Protein_GI_number: 16132053 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 9 331 1 323 323 520 99.0 1e-147 MIKRNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGG IDLSVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIIT LAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLMLAVVVIGIFLA HRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAG VGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGIL LFIFIALQRGLTVLWENRQSSPVTRVNIAQR >gi|299856434|gb|ADWV01000017.1| GENE 90 94203 - 95225 1170 340 aa, chain - ## HITS:1 COG:ECs5207 KEGG:ns NR:ns ## COG: ECs5207 COG1172 # Protein_GI_number: 15834461 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 340 2 341 341 492 98.0 1e-139 MPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILN RAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILA GLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIVTFNSPDLSWFGSGSLLFLPTP VIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAG IIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILL SGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRSHDKT >gi|299856434|gb|ADWV01000017.1| GENE 91 95239 - 96741 208 500 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 268 477 9 214 245 84 26 2e-15 MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYH ADRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGFLRRK EMEKRATELMTSYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQE VELLFGLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETRELPQIELVKM MLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRT ETAEVIFGIKPADSGTALIKGKQQNLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENII LALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTR PQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQ VAEIPLAELSVPAIMNAIAA >gi|299856434|gb|ADWV01000017.1| GENE 92 97051 - 98007 1155 318 aa, chain - ## HITS:1 COG:ECs5205 KEGG:ns NR:ns ## COG: ECs5205 COG1879 # Protein_GI_number: 15834459 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 318 1 318 318 571 99.0 1e-163 MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIAD GQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKS LYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAPN IKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGK DILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKSTL YLPDTAKEELEKKKNMGY >gi|299856434|gb|ADWV01000017.1| GENE 93 98317 - 98847 743 176 aa, chain + ## HITS:1 COG:ECs5204 KEGG:ns NR:ns ## COG: ECs5204 COG0221 # Protein_GI_number: 15834458 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 346 98.0 1e-95 MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYIN HTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLIAVPHTKLSKEYDH IKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFERAKNK >gi|299856434|gb|ADWV01000017.1| GENE 94 98927 - 99277 348 116 aa, chain - ## HITS:1 COG:ECs5203 KEGG:ns NR:ns ## COG: ECs5203 COG2337 # Protein_GI_number: 15834457 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Escherichia coli O157:H7 # 1 116 1 116 116 213 100.0 5e-56 MVKKSEFERGDIVLVGFDPASGHEQQGAGRPALVLSVQAFNQLGMTLVAPITQGGNFARY AGFSVPLHCEEGDVHGVVLVNQVRMMDLRARLAKRIGLAADEVVEEALLRLQAVVE >gi|299856434|gb|ADWV01000017.1| GENE 95 99271 - 99522 310 83 aa, chain - ## HITS:1 COG:chpS KEGG:ns NR:ns ## COG: chpS COG2336 # Protein_GI_number: 16132046 # Func_class: T Signal transduction mechanisms # Function: Growth regulator # Organism: Escherichia coli K12 # 1 83 3 85 85 154 100.0 3e-38 MRITIKRWGNSAGMVIPNIVMKELNLQPGQSVEAQVSNNQLILTPISRRYSLDELLAQCD MNAAELSEQDVWGKSTPAGDEIW >gi|299856434|gb|ADWV01000017.1| GENE 96 99734 - 100075 214 113 aa, chain - ## HITS:1 COG:ECs5200 KEGG:ns NR:ns ## COG: ECs5200 COG2105 # Protein_GI_number: 15834454 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 113 1 113 113 226 100.0 1e-59 MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGAVPGNGTVHGEVYRIDN ATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVDGLKLIESGDWLDRDK >gi|299856434|gb|ADWV01000017.1| GENE 97 100078 - 103857 4264 1259 aa, chain - ## HITS:1 COG:ytfN KEGG:ns NR:ns ## COG: ytfN COG2911 # Protein_GI_number: 16132043 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 1259 1 1259 1259 2435 99.0 0 MSLWKKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVPGLDIGKVTGGWRDLTL SDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQVNIDSKKMPPSEQVEEEE DSGPLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSGLNWQEKTLTLKPTSLKGLLI ALPKVAEVAQEEVVEPKIENPQPDEKPLGETLKDLFSRPVLPEMTDVHLPLNLNIEEFKG EQLRVTGDTDITVNTMLLKVSSIDGNTKLDALDIDSNQGIVNASGTAQLSDNWPVDITLN STLNVEPLKGEKVKLKVGGALREQLEIGVNLSGPVDMDLRAQTRLAEAGLPLNVEVNSKQ LYWPFTGEKQYQADDLKLKLTGKMTDYTLSMRTAVKGQEIPPATITLDAKGNEQQVNLDK LTVAALEGKTELKALLDWQQAISWRGELTLNGINTAKEFPEWPSKLNGLIKTRGSLYGGT WQMEVPELKLTGNVKQNKVNVDGTLKGNSYMQWMIPGLHLELGPNSAEVKGELGVKDLNL DATINAPGLDNALPGLGGTAKGLVKVRGTVEAPQLLADITARGLRWQELSVAQVRVEGDI KSTDQIAGKLDVRVEQISQPDVNINLVTLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFD RKEERWKGILSNTRFQTPVGPWSLTRDIALDYRNKEQKISIGPHCWLNPNAELCVPQTID AGAEGRAVVNLNRFDLAMLKPFMPQTTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNV QVTQTVNDAALPVAFQTLNLTAELRNNRAELGWTIRLTNNGQFDGQVQVTDPQGRRNLGG NVNIRNFNLAMINPIFTRGEKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPFD MQPSQLAVNFNGMRSTLAGTVRTQQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPM VRMDVSPDVVFEATPNLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEPK TASIPINSNLIVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQ DLIVRKGELLFSGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQ QAALSYLLRGQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQGVGD SSQVVVSGYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF >gi|299856434|gb|ADWV01000017.1| GENE 98 103854 - 105587 1656 577 aa, chain - ## HITS:1 COG:ECs5198 KEGG:ns NR:ns ## COG: ECs5198 COG0729 # Protein_GI_number: 15834452 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 1 577 1 577 577 1171 100.0 0 MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLSTIESDEVTPDRRFRAR VDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGVPVLIGGTDVVLRGGARTD KDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFDSEFTKAQLGIALGLHKAFWD IDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEYESKDLAELNRRLSATGWFNSVV VAPQFDKARETKVLPLTGVVSPRTENTIETGVGYSTDVGPRVKATWKKPWMNSYGHSLTT STSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGFKRTDLNDTESDSTTLVASRYWDLSSG WQRAINLRWSLDHFTQGEITNTTMLFYPGVMISRTRSRGGLMPTWGDSQRYSIDYSNTAW GSDVDFSVFQAQNVWIRTLYDRHRFVTRGTLGWIETGDFDKVPPDLRFFAGGDRSIRGYK YKSIAPKYANGDLKGASKLITGSLEYQYNVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGV GVRWESPVGPIKLDFAVPVADKDEHGLQFYIGLGPEL >gi|299856434|gb|ADWV01000017.1| GENE 99 105793 - 106431 676 212 aa, chain + ## HITS:1 COG:msrA KEGG:ns NR:ns ## COG: msrA COG0225 # Protein_GI_number: 16132041 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Escherichia coli K12 # 1 212 1 212 212 405 100.0 1e-113 MSLFDKKHLVSPADALPGRNTPMPVATLHAVNGHSMTNVPDGMEIAIFAMGCFWGVERLF WQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHD PAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPF YYAEDDHQQYLHKNPYGYCGIGGIGVCLPPEA Prediction of potential genes in microbial genomes Time: Sun May 15 15:39:00 2011 Seq name: gi|299856433|gb|ADWV01000018.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont17.1, whole genome shotgun sequence Length of sequence - 100842 bp Number of predicted genes - 97, with homology - 97 Number of transcription units - 60, operones - 17 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 462 391 ## ECO111_0312 hypothetical protein 2 1 Op 2 . - CDS 517 - 1335 714 ## ECO26_2908 hypothetical protein - Term 1373 - 1411 7.1 3 1 Op 3 . - CDS 1435 - 1668 72 ## EC55989_3360 hypothetical protein - Term 1683 - 1721 7.6 4 2 Op 1 . - CDS 1747 - 2202 317 ## ECED1_4883 hypothetical protein 5 2 Op 2 . - CDS 2278 - 4794 1434 ## ECO26_2902 hypothetical protein 6 3 Tu 1 . - CDS 4915 - 8034 2273 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 8255 - 8314 3.3 7 4 Tu 1 . - CDS 8362 - 9234 805 ## COG3596 Predicted GTPase + Prom 10213 - 10272 4.0 8 5 Tu 1 . + CDS 10464 - 11579 412 ## ECUMN_4878 hypothetical protein 9 6 Op 1 . - CDS 12269 - 12871 429 ## ECO26_2894 hypothetical protein - Term 12886 - 12914 0.5 10 6 Op 2 . - CDS 12958 - 13164 304 ## COG3311 Predicted transcriptional regulator 11 7 Tu 1 . + CDS 14884 - 15453 518 ## ECS88_4881 hypothetical protein + Term 15479 - 15524 -0.9 12 8 Tu 1 . + CDS 15619 - 16011 170 ## EcHS_A2131 hypothetical protein 13 9 Tu 1 . - CDS 16021 - 16155 96 ## ECO26_2889 putative transposase - Prom 16282 - 16341 1.7 14 10 Tu 1 . + CDS 16036 - 16455 88 ## ECB_02812 hypothetical protein 15 11 Tu 1 . - CDS 16510 - 16989 239 ## COG3547 Transposase and inactivated derivatives - Prom 17133 - 17192 4.0 + Prom 17093 - 17152 4.7 16 12 Tu 1 . + CDS 17175 - 17579 188 ## ECS88_2074 hypothetical protein + Prom 18350 - 18409 2.8 17 13 Tu 1 . + CDS 18596 - 18946 214 ## COG2963 Transposase and inactivated derivatives + Term 19155 - 19195 2.7 - Term 18812 - 18839 -0.4 18 14 Op 1 . - CDS 18866 - 19900 270 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase 19 14 Op 2 . - CDS 19974 - 20330 230 ## COG2963 Transposase and inactivated derivatives - Prom 20386 - 20445 2.6 20 15 Tu 1 . + CDS 20417 - 20617 122 ## SF2617 putative tail fiber protein + Term 20699 - 20744 -0.7 21 16 Tu 1 . - CDS 20451 - 20831 90 ## COG2801 Transposase and inactivated derivatives - Term 21173 - 21213 0.8 22 17 Tu 1 . - CDS 21314 - 21679 195 ## COG2963 Transposase and inactivated derivatives - Prom 21923 - 21982 4.0 + Prom 22565 - 22624 6.1 23 18 Op 1 8/0.000 + CDS 22722 - 23264 461 ## COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 24 18 Op 2 11/0.000 + CDS 23261 - 24004 798 ## COG0368 Cobalamin-5-phosphate synthase 25 18 Op 3 4/0.429 + CDS 24016 - 25095 632 ## COG2038 NaMN:DMB phosphoribosyltransferase 26 18 Op 4 1/0.857 + CDS 25160 - 26092 633 ## COG1376 Uncharacterized protein conserved in bacteria + Term 26119 - 26148 2.1 - TRNA 26150 - 26225 87.1 # Asn GTT 0 0 + Prom 26328 - 26387 2.9 27 18 Op 5 . + CDS 26419 - 27873 857 ## COG0534 Na+-driven multidrug efflux pump + Term 27996 - 28062 30.0 + TRNA 27974 - 28049 87.1 # Asn GTT 0 0 - Term 28453 - 28489 4.2 28 19 Tu 1 . - CDS 28502 - 29218 680 ## COG0217 Uncharacterized conserved protein - Prom 29278 - 29337 9.9 - Term 29461 - 29505 7.3 29 20 Tu 1 . - CDS 29561 - 31015 1148 ## COG0775 Nucleoside phosphorylase - Prom 31046 - 31105 5.8 - Term 31071 - 31116 1.5 30 21 Tu 1 . - CDS 31117 - 32433 1094 ## COG0477 Permeases of the major facilitator superfamily - Prom 32459 - 32518 4.6 31 22 Tu 1 . + CDS 32748 - 33452 310 ## COG0859 ADP-heptose:LPS heptosyltransferase + Term 33519 - 33554 -0.1 - Term 34005 - 34039 3.1 32 23 Tu 1 . - CDS 34062 - 41018 3257 ## ECB_01891 adhesin - Prom 41174 - 41233 4.1 - TRNA 41452 - 41527 87.1 # Asn GTT 0 0 - Term 41482 - 41520 -0.8 33 24 Tu 1 . - CDS 41628 - 42425 376 ## COG3228 Uncharacterized protein conserved in bacteria - Prom 42549 - 42608 80.3 + TRNA 42519 - 42608 75.5 # Ser CGA 0 0 - Term 42893 - 42928 2.3 34 25 Tu 1 . - CDS 43178 - 43708 257 ## COG3038 Cytochrome B561 - Prom 43787 - 43846 4.0 - Term 43916 - 43960 9.1 35 26 Tu 1 . - CDS 44051 - 44722 479 ## COG3443 Predicted periplasmic or secreted protein - Prom 44828 - 44887 8.9 36 27 Op 1 13/0.000 - CDS 44958 - 45593 482 ## COG2717 Predicted membrane protein 37 27 Op 2 3/0.714 - CDS 45594 - 46541 908 ## COG2041 Sulfite oxidase and related enzymes - Prom 46587 - 46646 4.8 38 28 Tu 1 . - CDS 46707 - 47120 288 ## COG2351 Transthyretin-like protein - Prom 47165 - 47224 5.2 + Prom 47068 - 47127 3.9 39 29 Tu 1 . + CDS 47205 - 47924 189 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 48266 - 48325 3.0 40 30 Tu 1 . + CDS 48380 - 49282 374 ## COG0642 Signal transduction histidine kinase + Term 49322 - 49367 7.2 - Term 49308 - 49354 9.2 41 31 Tu 1 . - CDS 49390 - 50241 817 ## COG0693 Putative intracellular protease/amidase - Term 50747 - 50789 8.1 42 32 Tu 1 . - CDS 50833 - 51906 1189 ## COG3203 Outer membrane protein (porin) - Prom 51997 - 52056 8.6 + Prom 52262 - 52321 9.7 43 33 Op 1 . + CDS 52534 - 52836 290 ## ECED1_2230 conserved hypothetical protein; putative inner membrane protein 44 33 Op 2 4/0.429 + CDS 52876 - 53571 567 ## COG1418 Predicted HD superfamily hydrolase 45 33 Op 3 6/0.071 + CDS 53638 - 55056 1422 ## COG0270 Site-specific DNA methylase 46 33 Op 4 . + CDS 55037 - 55507 486 ## COG3727 DNA G:T-mismatch repair endonuclease 47 34 Tu 1 . - CDS 55496 - 56416 962 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 56442 - 56501 5.0 + Prom 56434 - 56493 4.2 48 35 Op 1 3/0.714 + CDS 56595 - 57506 1109 ## COG2354 Uncharacterized protein conserved in bacteria 49 35 Op 2 2/0.786 + CDS 57585 - 57767 220 ## COG5475 Uncharacterized small protein + Prom 57856 - 57915 4.5 50 36 Tu 1 . + CDS 57956 - 59632 1463 ## COG2199 FOG: GGDEF domain + Term 59805 - 59841 3.7 51 37 Tu 1 . - CDS 59629 - 60444 761 ## COG3769 Predicted hydrolase (HAD superfamily) - Prom 60467 - 60526 2.2 52 38 Tu 1 . - CDS 60742 - 60969 248 ## G2583_2404 hypothetical protein - Prom 61028 - 61087 4.2 53 39 Tu 1 . + CDS 61132 - 61320 345 ## LF82_0529 protein DsrB + Term 61412 - 61457 4.0 54 40 Tu 1 . - CDS 61364 - 61987 378 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 62139 - 62198 2.7 55 41 Op 1 17/0.000 - CDS 62277 - 63062 731 ## COG1684 Flagellar biosynthesis pathway, component FliR 56 41 Op 2 16/0.000 - CDS 63070 - 63339 354 ## COG1987 Flagellar biosynthesis pathway, component FliQ 57 41 Op 3 6/0.071 - CDS 63349 - 64086 715 ## COG1338 Flagellar biosynthesis pathway, component FliP 58 41 Op 4 6/0.071 - CDS 64086 - 64451 276 ## COG3190 Flagellar biogenesis protein 59 41 Op 5 20/0.000 - CDS 64454 - 64867 550 ## COG1886 Flagellar motor switch/type III secretory pathway protein 60 41 Op 6 13/0.000 - CDS 64864 - 65868 1151 ## COG1868 Flagellar motor switch protein 61 41 Op 7 7/0.071 - CDS 65873 - 66337 504 ## COG1580 Flagellar basal body-associated protein - Prom 66370 - 66429 2.2 62 42 Op 1 8/0.000 - CDS 66442 - 67569 798 ## COG3144 Flagellar hook-length control protein 63 42 Op 2 12/0.000 - CDS 67566 - 68009 516 ## COG2882 Flagellar biosynthesis chaperone 64 42 Op 3 13/0.000 - CDS 68028 - 69401 1636 ## COG1157 Flagellar biosynthesis/type III secretory pathway ATPase 65 42 Op 4 15/0.000 - CDS 69401 - 70087 843 ## COG1317 Flagellar biosynthesis/type III secretory pathway protein 66 42 Op 5 19/0.000 - CDS 70080 - 71075 1331 ## COG1536 Flagellar motor switch protein 67 42 Op 6 . - CDS 71068 - 72726 1640 ## COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein - Prom 72812 - 72871 2.2 + Prom 72858 - 72917 3.6 68 43 Tu 1 . + CDS 72941 - 73255 462 ## COG1677 Flagellar hook-basal body protein - Term 73380 - 73410 2.0 69 44 Tu 1 . - CDS 73648 - 74316 561 ## COG2135 Uncharacterized conserved protein - Prom 74336 - 74395 2.7 70 45 Op 1 10/0.000 - CDS 74425 - 74658 329 ## COG0425 Predicted redox protein, regulator of disulfide bond formation 71 45 Op 2 . - CDS 74655 - 75860 1574 ## COG2391 Predicted transporter component - Prom 75898 - 75957 3.9 + Prom 75889 - 75948 7.2 72 46 Tu 1 . + CDS 76047 - 76460 563 ## SDY_1087 hypothetical protein + Term 76468 - 76502 5.0 - Term 76454 - 76488 5.0 73 47 Op 1 . - CDS 76494 - 77981 1525 ## COG0366 Glycosidases 74 47 Op 2 . - CDS 78059 - 78424 480 ## ECO103_2182 flagellar biosynthesis protein FliT 75 47 Op 3 15/0.000 - CDS 78424 - 78834 451 ## COG1516 Flagellin-specific chaperone FliS 76 47 Op 4 . - CDS 78859 - 80265 1287 ## COG1345 Flagellar capping protein - Prom 80417 - 80476 5.1 + Prom 80305 - 80364 4.2 77 48 Tu 1 . + CDS 80531 - 82198 1152 ## COG1344 Flagellin and related hook-associated proteins + Term 82373 - 82403 4.1 + Prom 82305 - 82364 4.0 78 49 Op 1 . + CDS 82518 - 83237 813 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit 79 49 Op 2 . + CDS 83286 - 83834 366 ## ECO111_2501 flagella biosynthesis protein FliZ + Prom 83838 - 83897 4.0 80 49 Op 3 2/0.786 + CDS 83922 - 84722 1284 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 84732 - 84785 3.9 + Prom 84740 - 84799 8.0 81 50 Op 1 1/0.857 + CDS 84827 - 85813 1131 ## COG2515 1-aminocyclopropane-1-carboxylate deaminase 82 50 Op 2 34/0.000 + CDS 85828 - 86496 676 ## COG0765 ABC-type amino acid transport system, permease component 83 50 Op 3 5/0.143 + CDS 86493 - 87245 659 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 87391 - 87439 5.2 + Prom 87337 - 87396 7.7 84 51 Tu 1 . + CDS 87511 - 88197 498 ## COG2771 DNA-binding HTH domain-containing proteins + Term 88230 - 88270 4.2 - Term 88216 - 88256 8.0 85 52 Tu 1 . - CDS 88264 - 88488 367 ## ECDH10B_2056 hypothetical protein - Prom 88679 - 88738 5.5 + Prom 88844 - 88903 5.2 86 53 Op 1 3/0.714 + CDS 88947 - 89603 498 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 87 53 Op 2 9/0.000 + CDS 89666 - 91432 1558 ## COG0322 Nuclease subunit of the excinuclease complex 88 53 Op 3 1/0.857 + CDS 91489 - 92037 264 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + TRNA 92189 - 92264 93.7 # Gly GCC 0 0 + TRNA 92319 - 92392 51.5 # Cys GCA 0 0 + TRNA 92405 - 92491 71.6 # Leu TAA 0 0 + Prom 92546 - 92605 2.9 89 54 Tu 1 . + CDS 92687 - 93352 763 ## COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA + Term 93357 - 93410 5.2 - Term 93351 - 93390 1.2 90 55 Tu 1 . - CDS 93414 - 94592 1136 ## COG0814 Amino acid permeases - Prom 94714 - 94773 6.6 + Prom 94684 - 94743 6.2 91 56 Tu 1 . + CDS 94816 - 95055 353 ## ECUMN_2201 hypothetical protein - Term 95052 - 95084 5.4 92 57 Op 1 . - CDS 95093 - 95590 680 ## COG1528 Ferritin-like protein - Prom 95624 - 95683 7.9 93 57 Op 2 . - CDS 95761 - 96084 59 ## SSON_1214 hypothetical protein - Prom 96224 - 96283 7.2 94 58 Tu 1 . + CDS 96548 - 96799 310 ## B21_01860 hypothetical protein + Term 96805 - 96844 7.4 - Term 96789 - 96836 7.9 95 59 Tu 1 . - CDS 96878 - 97381 513 ## COG1528 Ferritin-like protein - Prom 97561 - 97620 6.8 + Prom 98069 - 98128 5.1 96 60 Op 1 16/0.000 + CDS 98178 - 99167 1291 ## COG1879 ABC-type sugar transport system, periplasmic component 97 60 Op 2 . + CDS 99237 - 100751 183 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 Predicted protein(s) >gi|299856433|gb|ADWV01000018.1| GENE 1 3 - 462 391 153 aa, chain - ## HITS:1 COG:no KEGG:ECO111_0312 NR:ns ## KEGG: ECO111_0312 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 153 1 153 161 305 92.0 3e-82 MKTISHNSTTSSVSVTAASGNDQPQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGW MDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAAC LMTYSHHACRTECYAMTVHYYRLRDYALQHPEC >gi|299856433|gb|ADWV01000018.1| GENE 2 517 - 1335 714 272 aa, chain - ## HITS:1 COG:no KEGG:ECO26_2908 NR:ns ## KEGG: ECO26_2908 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 272 1 272 272 533 100.0 1e-150 MRLASRFGYANQIRRDRPLTHEELMHYVPGIFGEDKHTSRSQNYTYIPTITVLESLQREG FQPFFACQTRVRDPGRRGYTKHMLRLRRAGEINGEHVPEIILLNSHDGTSSYQMLPGYFR FVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFDRIEEKRDAMQSLILPPPARQ ALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKGK RIHTRAIHSIDTDIKLNRALWVMAETLLESLR >gi|299856433|gb|ADWV01000018.1| GENE 3 1435 - 1668 72 77 aa, chain - ## HITS:1 COG:no KEGG:EC55989_3360 NR:ns ## KEGG: EC55989_3360 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 77 1 77 77 154 100.0 1e-36 MPGYTEYVLAEGSFSYGQAVAVITAYRNVFIQDDPGMHFRRVIRNAEGQRRWRCRNSEPD AGKVLNTRLASDGLLRQ >gi|299856433|gb|ADWV01000018.1| GENE 4 1747 - 2202 317 151 aa, chain - ## HITS:1 COG:no KEGG:ECED1_4883 NR:ns ## KEGG: ECED1_4883 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 151 1 151 151 310 100.0 1e-83 MIHLFKTCMITAFILGLTWSAPLRAQDQRYISIRNTDTIWLPGNICAYQFRLDNGGNDEG FGPLTITLQLKDKYGQTLVTRKMETEAFGDSNATRTTDAFLETECVENVATTEIIKATEE SNGHRVSLPLSVFNPQDYHPLLITVSGKNVN >gi|299856433|gb|ADWV01000018.1| GENE 5 2278 - 4794 1434 838 aa, chain - ## HITS:1 COG:no KEGG:ECO26_2902 NR:ns ## KEGG: ECO26_2902 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 838 1 838 838 1641 99.0 0 MLQIVGALILLIAGFAILRLLFRALISTASALAGLILLCLFGPALLAGYITERITRLFHI RWLAGVFLTIAGMIISFMWGLDGKHIALEAHTFDSVKFILTTALAGGLLAVPLQIKNIQQ NGITPEDISKEINGYYCCFYTAFFLMACSACAPLIALQYDISPSLMWWGGLLYWLAALVT LLWAASQIQALKKLTCAISQTLEEQPVLNSKSWLTSLQNDYSLPDSLTERIWLTLISQRI SRGELREFELADGNWLLNNAWYERNMAGFNEQLKENLSFTPDELKTLFRNRLNLSPEAND DFLDRCLDGGDWYPFSEGRRFVSFHHVDELRICASCGLTEVHHAPENHKPDPEWYCSSLC RETETLCQEIYERPYNSFISDATANGLILMKLPETWSTNEKMFASGGQGHGFAAERGNHI VDRVRLKNARILGDNNARNGADRLVSGTEIQTKYCSTAARSVGAAFDGQNGQYRYMGNNG PMQLEVPRDQYAGAVETMRNKIREGKVPGVTDPAEASRLIRRGHLTYTQARNITRFGTIE SVTYDIAEGSVVSLAAGGISFALTASVFWLSTGDRDAALQTAAVQAGKTFTRTLAVYVTT QQLHRLSVVQGMLKHIDFSTASPTVRLALQKGTGAGNISALNKVMKGTLVTSLALVAVTT GPDMIKMLRGRISGAQFIRNLAVASSGVAGGAVGSVAGGILFSPLGPFGALTGRVVGGVL GGMIASAVSGKIAGALVEEDRVKILAMIQEQVTWLAGSFLLTGHEIENLNENLARVIDQN ALEIIFAAGIQQRAATNMLIKPLVVSIIRQRPVMEYDASHLGNMVNRLEEALPPELPA >gi|299856433|gb|ADWV01000018.1| GENE 6 4915 - 8034 2273 1039 aa, chain - ## HITS:1 COG:flu KEGG:ns NR:ns ## COG: flu COG3468 # Protein_GI_number: 16129941 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 1 1039 53 1091 1091 1677 99.0 0 MKRHLNTCYRLVWNHMTGAFVVASELARARGKRGGVAVALSLAAVTSLPVLAADIVVHPG ETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGL QRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG TVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRTEGTANTTVVYAGGD QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK VKNLNGQNGTISLRVRPDMAQNNTDRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ VVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA MDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG DLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA DIVALGTRHSMKASTDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQ PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLDLQAGLEARVRENITLGVQAGYAHS VSGSSAEGYNGQATLNVTF >gi|299856433|gb|ADWV01000018.1| GENE 7 8362 - 9234 805 290 aa, chain - ## HITS:1 COG:ECs1395 KEGG:ns NR:ns ## COG: ECs1395 COG3596 # Protein_GI_number: 15830649 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 550 95.0 1e-156 MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTRHEPVIGIMGKSGAGKSSLCNALFQGE VTPVSDVHAGTREVRRFRLSGHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLW LIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIRE KTEAVFRLFRPAHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRS QAREQFTGAVDRIFDTAESVCVASVVRTALRAVRDTVVSVARAVWNWIFF >gi|299856433|gb|ADWV01000018.1| GENE 8 10464 - 11579 412 371 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_4878 NR:ns ## KEGG: ECUMN_4878 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 366 24 389 517 696 95.0 0 MSFGQPCDEFPLSSLPPLIRDAVIEAQQITQAPLGLVAASALGAVSLVCQNLIDVCRLNT LRGPVSLFFLTLAESGERKTAVDKLLMKPLYQQEMQLYSRYKSELAVWKNKEELLKAQKK ALLSKLNKELRKGADESETLRQLEVLQKNSAEEPVRYKFIFNDATTAAIKNQLCGKWRSV GIMSDEAGIIFDGYTLSELPFINKMWDGSVLSVDRKNEPEQMIENARMTLSLMVQPGLFD RYMERKGSVARDSGFLARCLISKPATTQGKRFINGAVIPGGALTAFHERLMELARGSIEK SSEDERYCLHFSPEAQKIFIEHYNVLEQDLSPSGPLSPFRGHVSKKQKTLQELQRYFSIS AMVKGKSLPIS >gi|299856433|gb|ADWV01000018.1| GENE 9 12269 - 12871 429 200 aa, chain - ## HITS:1 COG:no KEGG:ECO26_2894 NR:ns ## KEGG: ECO26_2894 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 200 50 249 249 419 99.0 1e-116 MKPQYQTRYELLHESYQKWLTGFTRHAVSWGVCHPNIYYFHNLTPGWVSFNGEKPEIAIV PQSLHRLIYGPDKRATPPLDDDLIVNLCTSEHLLVHHPMLEGILLSECERLRQRSLANKL ISLFRQFGGTELRLKLVWLCWLDLMTGNCLDDWTENLKRKSEKELEEWIINRQKQSAALT DLMDQYVLLAYRTTVDDKRT >gi|299856433|gb|ADWV01000018.1| GENE 10 12958 - 13164 304 68 aa, chain - ## HITS:1 COG:Z1188 KEGG:ns NR:ns ## COG: Z1188 COG3311 # Protein_GI_number: 15800709 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 9 58 15 64 65 78 68.0 3e-15 MITPVSLMDDQMVDMAFITQLTGLTDKWFYKLIKDGDFPAPIKMGRSSRWLKSEVEAWLQ ARIAQSRP >gi|299856433|gb|ADWV01000018.1| GENE 11 14884 - 15453 518 189 aa, chain + ## HITS:1 COG:no KEGG:ECS88_4881 NR:ns ## KEGG: ECS88_4881 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 188 13 200 201 380 98.0 1e-104 MTYKYNPFWQQRIRETVRHALNVHPRLTALRVDLRLPDVPAATDAAVISRFINALKARID AYQKRKHREGKRVHPTTLHYVWAREFGEFKGKKHYHLLLLVNRDTWCRAGDYRAPESLAG MIKQAWCSALGVDVGCHATLVHFPAWPAVWLARNDDTGFQQVLERANYLAKEHTKAHCTG ERNFGCSRG >gi|299856433|gb|ADWV01000018.1| GENE 12 15619 - 16011 170 130 aa, chain + ## HITS:1 COG:no KEGG:EcHS_A2131 NR:ns ## KEGG: EcHS_A2131 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 130 1 130 130 249 100.0 2e-65 MYAKSFLALDGNGRLTGARTAQAAPYAHYTCHLCGSALRYHPQYDTELPWFEHTDDRLTE HGQQCPYVRPERREIQLIKRLQQFVPDALPVVRKASWHCRQCHHDYYGERYCTHCQTGGF SLPRTAQQLS >gi|299856433|gb|ADWV01000018.1| GENE 13 16021 - 16155 96 44 aa, chain - ## HITS:1 COG:no KEGG:ECO26_2889 NR:ns ## KEGG: ECO26_2889 # Name: not_defined # Def: putative transposase # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 44 279 322 322 88 97.0 6e-17 MRLLAAGKPKKVALVACIRKLLTILNAMLRKNEEWNESYHHVAP >gi|299856433|gb|ADWV01000018.1| GENE 14 16036 - 16455 88 139 aa, chain + ## HITS:1 COG:no KEGG:ECB_02812 NR:ns ## KEGG: ECB_02812 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 62 2 63 97 90 69.0 2e-17 MVRFIPFFVLSEHCVQDSQQLAYTGNQRHFFGFSCGKQSHVKHLYYRVKAGCDKRCHVQG CSHTSPAAKDGSSPSHRARVPVYWNHTDKRTDFTPGEVTLFGYFRQQRSSRHGANTFNIA QSLSKLFEVAMDMAVHVSI >gi|299856433|gb|ADWV01000018.1| GENE 15 16510 - 16989 239 159 aa, chain - ## HITS:1 COG:all0306 KEGG:ns NR:ns ## COG: all0306 COG3547 # Protein_GI_number: 17227802 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 6 153 5 146 320 98 37.0 6e-21 MSQPGSLCVGIDVSKAILDIAASSAIEQFSVGNDSDGFEAIIAELRMYAIALVLMKATGG LETAIVCALQAEGFELAVVTPRQARDFARTMGYLAKTDSIDARVLYQMAEVLNRHPERER FIRALPDTECQVLTAMVVRRRQLITMLVAERNRLHPAHP >gi|299856433|gb|ADWV01000018.1| GENE 16 17175 - 17579 188 134 aa, chain + ## HITS:1 COG:no KEGG:ECS88_2074 NR:ns ## KEGG: ECS88_2074 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 1 130 30 159 165 254 93.0 1e-66 MRILNCYMANDSKGHFVTAKEAAKNNRQDVLCCVSCGCPLTLKRGNDGQPPWFEHDQMTV AAKILLRCTWLDPAEKEARRLHLQGMTVPDYTVKVRKWFCVMCDEDYEGEKCCPRCGTGV YSRDRGAAGGQLEG >gi|299856433|gb|ADWV01000018.1| GENE 17 18596 - 18946 214 116 aa, chain + ## HITS:1 COG:ECs1328 KEGG:ns NR:ns ## COG: ECs1328 COG2963 # Protein_GI_number: 15830582 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 105 1 105 113 187 98.0 3e-48 MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTV AELESEILQLRKALNEARLERDILKKATVDSICQCNTPFNYLFRCFELQCLSRSVV >gi|299856433|gb|ADWV01000018.1| GENE 18 18866 - 19900 270 344 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 19 339 11 317 317 108 31 1e-22 MLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNR GRRYYKAVDANNRANRMAKRPKPCLLDKNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQ KTLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIH ERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIILRLRGKDSVSVNQALTDKF LSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQYFPK KTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD >gi|299856433|gb|ADWV01000018.1| GENE 19 19974 - 20330 230 118 aa, chain - ## HITS:1 COG:yi91a KEGG:ns NR:ns ## COG: yi91a COG2963 # Protein_GI_number: 16128240 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 118 13 134 134 122 52.0 2e-28 MSGKRYPEEFKTEAVKQVVDRGYSVASVATRLDITSHSLYAWIKKYGPDSSTNKEQSDAP AEIRRLQKELKRVTDERDILKKAAVDSIGQRNSYVKTWGCGGFLNETNIYSRGKSLCF >gi|299856433|gb|ADWV01000018.1| GENE 20 20417 - 20617 122 66 aa, chain + ## HITS:1 COG:no KEGG:SF2617 NR:ns ## KEGG: SF2617 # Name: not_defined # Def: putative tail fiber protein # Organism: S.flexneri # Pathway: not_defined # 9 66 302 359 359 132 100.0 5e-30 MIYKYVMTGFAPIFPDICYHLTHYKPAAADIPVASDNPAHYADAIRYNARTPLQGSLLPL TRLVWA >gi|299856433|gb|ADWV01000018.1| GENE 21 20451 - 20831 90 126 aa, chain - ## HITS:1 COG:yi22 KEGG:ns NR:ns ## COG: yi22 COG2801 # Protein_GI_number: 16132094 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 126 176 301 301 263 100.0 5e-71 MLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAES FVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSD NRCLEI >gi|299856433|gb|ADWV01000018.1| GENE 22 21314 - 21679 195 121 aa, chain - ## HITS:1 COG:yi21_g3 KEGG:ns NR:ns ## COG: yi21_g3 COG2963 # Protein_GI_number: 16129938 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 121 16 136 136 207 99.0 4e-54 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSPVARQHGVAASQLFLWRKQYQEGSLTA VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG E >gi|299856433|gb|ADWV01000018.1| GENE 23 22722 - 23264 461 180 aa, chain + ## HITS:1 COG:ECs2788 KEGG:ns NR:ns ## COG: ECs2788 COG2087 # Protein_GI_number: 15832042 # Func_class: H Coenzyme transport and metabolism # Function: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase # Organism: Escherichia coli O157:H7 # 1 180 2 181 181 356 99.0 1e-98 MILVTGGARSGKSRHAEVLIGDSSQVLYIATSQILDDEMAARIEHHRQGRPEHWRTVERW QHLDELIHADINPNEVVLLECVTTMVTNLLFDYGGDKDPDEWDYQAMEQAINAEIQSLIA ACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQQLAAAANEVWLVVSGIGVKIK >gi|299856433|gb|ADWV01000018.1| GENE 24 23261 - 24004 798 247 aa, chain + ## HITS:1 COG:cobS KEGG:ns NR:ns ## COG: cobS COG0368 # Protein_GI_number: 16129933 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin-5-phosphate synthase # Organism: Escherichia coli K12 # 1 247 1 247 247 413 100.0 1e-115 MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLLGAISGLVFMVLQAWCG APLAALFSVLVLVLMTGGFHLDGLADTCDGVFSARSRDRMLEIMRDSRLGTHGGLALIFV VLAKILVLSELALRGESILASLAAACAVSRGTAALLMYRHRYAREEGLGNVFIGKIDGRQ TCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQLLKRTLGGQTGDTLGAAIELGEL VFLLALL >gi|299856433|gb|ADWV01000018.1| GENE 25 24016 - 25095 632 359 aa, chain + ## HITS:1 COG:cobT KEGG:ns NR:ns ## COG: cobT COG2038 # Protein_GI_number: 16129932 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 358 1 358 359 640 98.0 0 MQILADLLNTIPAIDSAAMSRAQRHIDGLLKPVGSLGKLEALAIQLAGMPGLNGIPHVGK KAVLVMCADHGVWEEGVAISPKEVTAIQAENMTRGTTGVCVLAEQAGANVHVIDVGIDTA EPIPGLINMRVARGSGNIASAPAMSRRQAEKLLLDVICYTQELAKNGVTLFGVGELGMAN TTPAAAIVSTITGRDPEEVVGIGANLPTDKLANKIDVVRRAITLNQPNPQDGIDVLAKVG GFDLVGIAGVMLGAASCGLPVLLDGFLSYAAALAACQMSPAIKPYLIPSHLSAEKGARIA LSHLGLEPYLNMDMRLGEGSGAALAMPIIEAACAIYNNMGELAASNIVLPGNTTSDLNC >gi|299856433|gb|ADWV01000018.1| GENE 26 25160 - 26092 633 310 aa, chain + ## HITS:1 COG:ECs2785 KEGG:ns NR:ns ## COG: ECs2785 COG1376 # Protein_GI_number: 15832039 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 593 98.0 1e-169 MRRVNILCSFALLFASQNSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQG LSNMLEANPGADVFLPKPGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVF PIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLY AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTE PDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPV QISSGSRQMF >gi|299856433|gb|ADWV01000018.1| GENE 27 26419 - 27873 857 484 aa, chain + ## HITS:1 COG:yeeO KEGG:ns NR:ns ## COG: yeeO COG0534 # Protein_GI_number: 16129928 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 1 484 64 547 547 876 99.0 0 MNISSALRQVVHGTRWHAKRKSYKVLFWREITPLAVPIFMENACVLLMGVLSTFLVSWLG KDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLGKRDRRRARVATRQSLVIMTLFAV LLATLIHHFGEQIIDFVAGDATTEVKALALTYLELTVLSYPATAITLIGSGALRGAGNTK IPLLINGSLNILNIIISGILIYGLFSWPGLGFVGAGLGLTISRYIGAVAILWVLAIGFNP ALRISLKSYFKPLNFSIIWEVMGIGIPASVESVLFTSGRLLTQMFVAGMGTSVIAGNFIA FSIAALINLPGSALGSASTIITGRRLGVGQIAQAEIQLRHVFWLSTLGLTAIAWLTAPFA GVMASFYTQDPQVKHVVVILIWLNALFMPIWSASWVLPAGFKGARDARYAMWVSMLSMWG CRVVVGYVLGIMLGWGVVGVWMGMFADWAVRAVLFYWRMVTGRWLWKYPRPEPQKCEKKP VVSE >gi|299856433|gb|ADWV01000018.1| GENE 28 28502 - 29218 680 238 aa, chain - ## HITS:1 COG:yeeN KEGG:ns NR:ns ## COG: yeeN COG0217 # Protein_GI_number: 16129927 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 238 1 238 238 441 100.0 1e-124 MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVP KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNKKGGN IGAAGSVSYMFDNTGVIVFKGTDPDHIFEILLEAEVDVRDVTEEEGNIVIYTEPTDLHKG IAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNVANL >gi|299856433|gb|ADWV01000018.1| GENE 29 29561 - 31015 1148 484 aa, chain - ## HITS:1 COG:ECs2779 KEGG:ns NR:ns ## COG: ECs2779 COG0775 # Protein_GI_number: 15832033 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Escherichia coli O157:H7 # 1 484 1 484 484 999 100.0 0 MNNKGSGLTPAQALDKLDALYEQSVVALRNAIGNYITSGELPDENARKQGLFVYPSLTVT WDGSTTNPPKTRAFGRFTHAGSYTTTITRPTLFRSYLNEQLTLLYQDYGAHISVQPSQHE IPYPYVIDGSELTLDRSMSAGLTRYFPTTELAQIGDETADGIYHPTEFSPLSHFDARRVD FSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDPDSPYIALSCAGGNWIT AETEAPEEAISDLAWKKHQMPAWHLITADGQGITLVNIGVGPSNAKTICDHLAVLRPDVW LMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKLVSG RPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVAIDMESATIAAQGYRFRVPY GTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDRLHSRKLRTFNE PPFR >gi|299856433|gb|ADWV01000018.1| GENE 30 31117 - 32433 1094 438 aa, chain - ## HITS:1 COG:shiA KEGG:ns NR:ns ## COG: shiA COG0477 # Protein_GI_number: 16129925 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 438 1 438 438 809 100.0 0 MDSTLISTRPDEGTLSLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA MGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTI GWWAPILLVTLRAIQGFAVGGEWGGAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGL VSLISMMTTDEQFLSWGWRIPFLFSIVLVLGALWVRNGMEESAEFEQQQHYQAAAKKRIP VIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNMGLPRELFLNIGLLVGGLSC LTIPCFAWLADRFGRRRVYITGTLIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMV VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALITYFAGNWHSVAIYLLA GCLISAMTALLMKDSQRA >gi|299856433|gb|ADWV01000018.1| GENE 31 32748 - 33452 310 234 aa, chain + ## HITS:1 COG:b1980 KEGG:ns NR:ns ## COG: b1980 COG0859 # Protein_GI_number: 16129924 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli K12 # 1 234 1 234 234 449 99.0 1e-126 MFLASLLRRIAFSYYDYKAYNFNIEKTDFVVIHIPDQIGDAMAIFPVIRALELHKIKHLL IVTSTINLEVFNALKLEQTKLTLVTMTMQDHATLKEIKDLAKNITQQYGTPDLCIEGMRK KNLKTMLFISQLKAKTNFQVVGITMNCFSPLCKNASRMDQKLRAPVPMTWAFMMREAGFP AVRLIYELPLSEDVLDEVREEMRSLGSYIAFNLEGSSQERTFSLSIAENLIAKI >gi|299856433|gb|ADWV01000018.1| GENE 32 34062 - 41018 3257 2318 aa, chain - ## HITS:1 COG:no KEGG:ECB_01891 NR:ns ## KEGG: ECB_01891 # Name: yeeJ # Def: adhesin # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 2318 66 2383 2383 3912 99.0 0 MAAAAQGVVNAATQQPVPAQIAIANANTVPYTLGALESAQSVAERFGISVAELRKLNQFR TFARGFDNVRQGDELDVPAQVSEKKLTPPPGNSSDNLEQQIASTSQQIGSLLAEDMNSEQ AANMARGRASSQASGAMTDWLSRFGTARITLGVDEDFSLKNSQFDFLHPWYKTPDNLFFS QHTLHRTDERTQINNGLGWRHFTPTWMSGINFFFDHDLSRYHSRAGIGAEYWRDYLKLSS NGYLRLTNWRSAPELDNDYEARPANGWDVRAESWLPAWPHLGGKLVYEQYYGDEVALFDK DDRQSNPHAITAGLNYTPFPLMTFSAEQRQGKQGENDTRFAVDFTWQPGSAMQKQLDPNE VAARRSLAGSRYDLVDRNNNIVLEYRKKELVRLTLTDPVTGKSGEVKSLVSSLQTKYALK GYNVEATALEAAGGKVVTTGKDILVTLPAYRFTSTPETDNTWPIEVTAEDVKGNLSNREQ SMVVVQAPTLSQKDSSVSLSTQTLNADSHSTATLTFIAHDAAGNPVVGLVLSTRHEGVQD ITLSDWKDNGDGSYTQILTTGAMSGTLTLMPQLNGVDAAKAPAVVNIISVSSSRTHSSIK IDKDRYLSGNPIEVTVELRDENDKPVKEQKQQLNNAVSIDNVKPGVTTDWKETADGVYKA TYTAYTKGSGLTAKLLMQNWNEDLHTAGFIIDANPQSAKIATLSASNNGVLANENAANTV SVNVADEGSNPINDHTVTFAVLSGSATSFNNQNTAKTDVNGLATFDLKSSKQEDNTVEVT LENGVKQTLIVSFVGDSSTAQVDLQKSKNEVVADGNDSVTMTATVRDAKGNLLNDVMVTF NVNSAEAKLSQTEVNSHDGIATATLTSLKNGDYRVTASVSSGSQANQQVNFIGDQSTAAL TLSVPSGDITVTNTAPQYMTATLQDKNGNPLKDKEITFSVPNDVASKFSISNGGKGMTDS NGVAIASLTGTLAGTHMIMARLANSNVSDAQPMTFVADKDRAVVVLQTSKAEIIGNGVDE TTLTATVKDPSNHPVAGITVNFTMPQDVAANFTLENNGIAITQANGEAHVTLKGKKAGTH TVTATLGNNNTSDSQPVTFVADKASAQVVLQISKDEITGNGVDSATLTATVKDQFDNEVN NLPVTFSSASSGLTLPPGVSNTNESGIAQATLAGVAFGEKTVTASLANNGASDNKTVHFI GDTAAAKIIELTPVPDSIIAGTPQNSSGSVITATVVDNNGFPVKGVTVNFTSNAATAEMT NGGQAVTNEQGKATVTYTNTRSSIESGARPDTVEASLENGSSTLSTSINVNADASTAHLT LLQALFDTVSAGETTSLYIEVKDNYGNGVPQQEVTLSVSPSEGVTPSNNAIYTTNHDGNF YASFTATKAGVYQLTATLENGDSMQQTVTYVPNVANAEITLAASKDPVIADNNDLTTLTA TVADTEGNAIANTEVTFTLPEDVKANFTLSDGGKVITDAEGKAKVTLKGTKAGAHTVTAS MTGGKSEQLVVNFIADTLTAQVNLNVTEDNFIANNVGMTRLQATVTDGNGNPLANEAVTF TLPADVSASFTLGQGGSAITDINGKAEVTLSGTKSGTYPVTVSVNNYGVSDTKQVTLIAD AGTAKLASLTSVYSFVVSTTEGATMTASVTDANGNPVEGIKVNFRGTSVTLSSTSVETDD RGFAEILVTSTEVGLKTVSASLADKPTEVISRLLNASADVNSATITSLEIPEGQVMVAQD VAVKAHVNDQFGNPVAHQPVTFSAEPSSQMIISQNTVSTNTQGVAEVTMTPERNGSYMVK ASLPNGASLEKQLEAIDEKLTLTASSPLIGVYAPTGATLTATLTSANGTPVEGQVINFSV TPEGATLSGGKVRTNSSGQAPVVLTSNKVGTYTVTASFHNGVTIQTQTTVKVTGNSSTAH VASFIADPSTIAATNTDLSTLKATVEDGSGNLIEGLTVYFALKSGSATLTSLTAVTDQNG IATTSVKGAMTGSVTVSAVTTAGGMQTVDITLVAGPADTSQSVLKSNRSSLKGDYTDSAE LRLVLHDISGNPIKVSEGMEFVQSGTNVPYIKISAIDYSLNINGDYKATVTGGGEGIATL IPVLNGVHQAGLSTTIQFTRAEDKIMSGTVSVNGTDLPTTTFPSQGFTGAYYQLNNDNFA PGKTAADYEFSSSASWVDVDATGKVTFKNVGSNSERITATPKSGGPSYVYEIRVKSWWVN AGEAFMIYSLAENFCSSNGYTLPRANYLNHCSSRGIGSLYSEWGDMGHYTTDAGFQSNMY WSSSPANSSEQYVVSLATGDQSVFEKLGFAYATCYKNL >gi|299856433|gb|ADWV01000018.1| GENE 33 41628 - 42425 376 265 aa, chain - ## HITS:1 COG:ECs2774 KEGG:ns NR:ns ## COG: ECs2774 COG3228 # Protein_GI_number: 15832028 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 265 14 278 278 532 100.0 1e-151 MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAERFLQQKRLVPLQGFEL DSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQ SWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPFIPLREVAGWEHDL HAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELFAPRFPSLWQRFCQ FYQQDPLQRLHHANDTDSFSATNVH >gi|299856433|gb|ADWV01000018.1| GENE 34 43178 - 43708 257 176 aa, chain - ## HITS:1 COG:yodB KEGG:ns NR:ns ## COG: yodB COG3038 # Protein_GI_number: 16129920 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Escherichia coli K12 # 1 176 11 186 186 327 99.0 5e-90 MNRFSKTQIYLHWITLLFVAITYAAMELRGWFPKGSSTYLLMRETHYNAGIFVWVLMFSR LIIKHRYSDPSIVPPPPAWKMKAASLMHIMLYITFLALPLLGIALMAYSGKSWSFLGFNV SPFVTPNSEIKALIKNIHETWANIGYFLIAAHAGAALFHHYIQKDNTLLRMMPRRK >gi|299856433|gb|ADWV01000018.1| GENE 35 44051 - 44722 479 223 aa, chain - ## HITS:1 COG:yodA KEGG:ns NR:ns ## COG: yodA COG3443 # Protein_GI_number: 16129919 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted protein # Organism: Escherichia coli K12 # 8 223 1 216 216 433 99.0 1e-121 MTLEETVLAIRLHKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGVFDDANVQNR TLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYATDIEMIGIEDG IVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPKYIQFSDHIIAPRK SSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH >gi|299856433|gb|ADWV01000018.1| GENE 36 44958 - 45593 482 211 aa, chain - ## HITS:1 COG:yedZ KEGG:ns NR:ns ## COG: yedZ COG2717 # Protein_GI_number: 16129918 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 211 1 211 211 337 99.0 9e-93 MRLTAKQVTWLKVSLHLAGLLPFLWLVWAINHGGLGADPVKDIQHFTGRTALKFLLATLL ITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGVNNLALLGKELITRPYLTL GIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAILAPIHYLWSVKIISPQPLIYA GLAVLLLALRYKKLRSLFNRLRKQVHNKLSV >gi|299856433|gb|ADWV01000018.1| GENE 37 45594 - 46541 908 315 aa, chain - ## HITS:1 COG:ECs2709 KEGG:ns NR:ns ## COG: ECs2709 COG2041 # Protein_GI_number: 15831963 # Func_class: R General function prediction only # Function: Sulfite oxidase and related enzymes # Organism: Escherichia coli O157:H7 # 1 315 20 334 334 631 99.0 0 MKRRQVLKALGISAAALSLPHAAHADLLSWFKGNDRPPAPAGKPLEFSKPAAWQNNLPLT PVDKVSGYNNFYEFGLDKADPAANAGSLKTDPWTLKISGEVAKPLTLDHDDLTRRFPLEE RIYRMRCVEAWSMVVPWIGFPLHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGG LKYPYVEGLRLDEAMHPLTLMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLT RERPPTTWNLAAPDEYGFYANVNPHVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYAD QVASLYRGLDLRENF >gi|299856433|gb|ADWV01000018.1| GENE 38 46707 - 47120 288 137 aa, chain - ## HITS:1 COG:ECs2708 KEGG:ns NR:ns ## COG: ECs2708 COG2351 # Protein_GI_number: 15831962 # Func_class: R General function prediction only # Function: Transthyretin-like protein # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 271 100.0 3e-73 MLKRYLVLSVVTAAFSLPSLVYAAQQNILSVHILNQQTGKPAADVTVTLEKKADNGWLQL NTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHY HVPLLLSQYGYSTYRGS >gi|299856433|gb|ADWV01000018.1| GENE 39 47205 - 47924 189 239 aa, chain + ## HITS:1 COG:yedW KEGG:ns NR:ns ## COG: yedW COG0745 # Protein_GI_number: 16129915 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 239 1 239 239 458 99.0 1e-129 MNQVVSITYDLWHIIFMKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDD YALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSF SELLARVRAQLRQHHALNSTLEISGLRMDSVSQSVSRDNISITLTRKEFQLLWLLASRAG EIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK >gi|299856433|gb|ADWV01000018.1| GENE 40 48380 - 49282 374 300 aa, chain + ## HITS:1 COG:yedV KEGG:ns NR:ns ## COG: yedV COG0642 # Protein_GI_number: 16129914 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 300 153 452 452 570 98.0 1e-162 MLEQYKINSIIICIVAIILCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALP RELKPLGQALNKMHHALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQ KTIAGNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEI CFKVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIEITSFLDTNGYLNIDVASPGTK IHEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLNKHNVFRIMLPQRN >gi|299856433|gb|ADWV01000018.1| GENE 41 49390 - 50241 817 283 aa, chain - ## HITS:1 COG:yedU KEGG:ns NR:ns ## COG: yedU COG0693 # Protein_GI_number: 16129913 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Escherichia coli K12 # 1 283 1 283 283 576 99.0 1e-164 MTVQTSKNPQVDIAEDNAFFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERY LPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPHKDEKVMPFF EQHKSLFRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRF VISLCHGPAAFLALRHGDNPLNGYSICAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGM NIINDDITGRVHKDRKVLTGDSPFAANALGKLAAQEMLAAYAG >gi|299856433|gb|ADWV01000018.1| GENE 42 50833 - 51906 1189 357 aa, chain - ## HITS:1 COG:STM1572 KEGG:ns NR:ns ## COG: STM1572 COG3203 # Protein_GI_number: 16764916 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Salmonella typhimurium LT2 # 1 357 1 362 362 338 57.0 8e-93 MKRKVLAMLVPALLVAGAANAAEIYNKDGNKVDFYGKMVGERIWSNTDDNNSENEDTSYA RFGVKGETQITSELTGFGQFEYNLDASKPEGSNQEKTRLTFAGLKYNELGSFDYGRNYGV AYDAAAYTDMLVEWGGDSWASADNFMNGRTNGVATYRNSDFFGLVDGLNFAVQYQGKNSN RGVTKQNGDGYALSVDYNIEGFGFVGAYSKSDRTNEQAGDGYGDNAEVWSLAAKYDANNI YAAMMYGETRNMTVLANDHFANKTQNFEAVVQYQFDFGLRPSLGYVYSKGKDLYARDGHK GVDADRVNYIEVGTWYYFNKNMNVYTAYKFNLLDKDDAAITDAATDDQFAVGIVYQF >gi|299856433|gb|ADWV01000018.1| GENE 43 52534 - 52836 290 100 aa, chain + ## HITS:1 COG:no KEGG:ECED1_2230 NR:ns ## KEGG: ECED1_2230 # Name: yedR # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 100 22 121 121 184 100.0 7e-46 MEYGSTKMEERLSRSPGGKPALWAFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGS TAGKWLGALVGFLFMALVGALLGSIAWYTRPRPARSRRYE >gi|299856433|gb|ADWV01000018.1| GENE 44 52876 - 53571 567 231 aa, chain + ## HITS:1 COG:yedJ KEGG:ns NR:ns ## COG: yedJ COG1418 # Protein_GI_number: 16129908 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Escherichia coli K12 # 1 231 1 231 231 422 99.0 1e-118 MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDI VSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEA KIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDDKRYALDHFQTKLLK LPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSPAG >gi|299856433|gb|ADWV01000018.1| GENE 45 53638 - 55056 1422 472 aa, chain + ## HITS:1 COG:ECs2699 KEGG:ns NR:ns ## COG: ECs2699 COG0270 # Protein_GI_number: 15831953 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Escherichia coli O157:H7 # 1 472 1 472 472 961 100.0 0 MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENHWSAAILKRALANDSAW HRLSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHA VRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPF SLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDQGKTFRI IMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKADFTLRDIS ECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVT RTLSARYYKDGAEILIDRGWDMATGEKDFDDPLNQQHRPRRLTPRECARLMGFEAPGEAK FRIPVSDTQAYRQFGNSVVVPVFAAVAKLLEPKIKQAVALRQQEAQHGRRSR >gi|299856433|gb|ADWV01000018.1| GENE 46 55037 - 55507 486 156 aa, chain + ## HITS:1 COG:vsr KEGG:ns NR:ns ## COG: vsr COG3727 # Protein_GI_number: 16129906 # Func_class: L Replication, recombination and repair # Function: DNA G:T-mismatch repair endonuclease # Organism: Escherichia coli K12 # 1 156 1 156 156 309 98.0 1e-84 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGSPDFVVDEYRCV IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR GREKLTDEALTERLEEWICGEGASAQIDTQGILLLA >gi|299856433|gb|ADWV01000018.1| GENE 47 55496 - 56416 962 306 aa, chain - ## HITS:1 COG:ECs2697 KEGG:ns NR:ns ## COG: ECs2697 COG0697 # Protein_GI_number: 15831951 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 450 100.0 1e-126 MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGH KLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIK TRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMA GAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPA LATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAKPVVAPVI QDASSE >gi|299856433|gb|ADWV01000018.1| GENE 48 56595 - 57506 1109 303 aa, chain + ## HITS:1 COG:yedI KEGG:ns NR:ns ## COG: yedI COG2354 # Protein_GI_number: 16129904 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 303 3 305 305 500 99.0 1e-141 MAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPA QSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIA LVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFL VGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVAKIRG QAH >gi|299856433|gb|ADWV01000018.1| GENE 49 57585 - 57767 220 60 aa, chain + ## HITS:1 COG:ECs2695 KEGG:ns NR:ns ## COG: ECs2695 COG5475 # Protein_GI_number: 15831949 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Escherichia coli O157:H7 # 1 60 1 60 60 102 100.0 2e-22 MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETELVPGEGSRSAEEV >gi|299856433|gb|ADWV01000018.1| GENE 50 57956 - 59632 1463 558 aa, chain + ## HITS:1 COG:yedQ_2 KEGG:ns NR:ns ## COG: yedQ_2 COG2199 # Protein_GI_number: 16129902 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 380 558 1 179 179 357 100.0 5e-98 MENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANA LDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWQIELNRRRTLSV NGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNTSSMVVQAMYVSRAGFYVST QPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDS NNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRE LALLAQAMEHDTRGGIRMDSRYVSWERLNHFDGVLVRVHTLSEGVRGDFGSISIALTLLW ALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTH QHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILP GASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRR LYLAKQAGRNRVFASDNA >gi|299856433|gb|ADWV01000018.1| GENE 51 59629 - 60444 761 271 aa, chain - ## HITS:1 COG:ECs2693 KEGG:ns NR:ns ## COG: ECs2693 COG3769 # Protein_GI_number: 15831947 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli O157:H7 # 1 271 1 271 271 532 98.0 1e-151 MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLSRLREANVPVILCSSKTSAEMLYLQKT LGLQGLPLIAENGAVIQLAEQWQDIDGFPRIISGISHGEISQVLNTLREKEHFKFTTFDD VDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWH VLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGGH LHDEDPAHVWRTQREGPEGWREGLDHFFSAR >gi|299856433|gb|ADWV01000018.1| GENE 52 60742 - 60969 248 75 aa, chain - ## HITS:1 COG:no KEGG:G2583_2404 NR:ns ## KEGG: G2583_2404 # Name: yodD # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 75 6 80 80 112 100.0 4e-24 MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHVSVDGREYHTWRELADA FELDIHDFSVSEVNR >gi|299856433|gb|ADWV01000018.1| GENE 53 61132 - 61320 345 62 aa, chain + ## HITS:1 COG:no KEGG:LF82_0529 NR:ns ## KEGG: LF82_0529 # Name: dsrB # Def: protein DsrB # Organism: E.coli_LF82 # Pathway: not_defined # 1 62 1 62 62 124 100.0 1e-27 MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEK AE >gi|299856433|gb|ADWV01000018.1| GENE 54 61364 - 61987 378 207 aa, chain - ## HITS:1 COG:ECs2690 KEGG:ns NR:ns ## COG: ECs2690 COG2771 # Protein_GI_number: 15831944 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 379 99.0 1e-105 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH DASNSQHIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI KTHNKQVIYHVVRLTDNVTNGIFVNMR >gi|299856433|gb|ADWV01000018.1| GENE 55 62277 - 63062 731 261 aa, chain - ## HITS:1 COG:fliR KEGG:ns NR:ns ## COG: fliR COG1684 # Protein_GI_number: 16129897 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliR # Organism: Escherichia coli K12 # 1 261 1 261 261 362 98.0 1e-100 MLQVTSDQWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKLGLAMMITFAIAPSLPA NDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPASHL NMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIGGEPLNSNAFLALTKAGSLIF LNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMPLIAPFC EHLFSEMFNLLTDIISELPLI >gi|299856433|gb|ADWV01000018.1| GENE 56 63070 - 63339 354 89 aa, chain - ## HITS:1 COG:STM1980 KEGG:ns NR:ns ## COG: STM1980 COG1987 # Protein_GI_number: 16765318 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliQ # Organism: Salmonella typhimurium LT2 # 1 89 1 89 89 98 95.0 3e-21 MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFI AIIIAGPWMLNLLLDYVRTLFTNLPYIIG >gi|299856433|gb|ADWV01000018.1| GENE 57 63349 - 64086 715 245 aa, chain - ## HITS:1 COG:ECs2687 KEGG:ns NR:ns ## COG: ECs2687 COG1338 # Protein_GI_number: 15831941 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FliP # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 391 99.0 1e-109 MRRLLSIAPVLLWLVTPLAFAQLPGITSQPLPGGGQSWSLPVQTLVFITSLTFIPAILLM MTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEEK ISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQGPEAVPMRILLPAYVTSELK TAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLA QSFYS >gi|299856433|gb|ADWV01000018.1| GENE 58 64086 - 64451 276 121 aa, chain - ## HITS:1 COG:STM1978 KEGG:ns NR:ns ## COG: STM1978 COG3190 # Protein_GI_number: 16765316 # Func_class: N Cell motility # Function: Flagellar biogenesis protein # Organism: Salmonella typhimurium LT2 # 1 121 2 125 125 136 66.0 1e-32 MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASA SLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGR S >gi|299856433|gb|ADWV01000018.1| GENE 59 64454 - 64867 550 137 aa, chain - ## HITS:1 COG:ECs2685 KEGG:ns NR:ns ## COG: ECs2685 COG1886 # Protein_GI_number: 15831939 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar motor switch/type III secretory pathway protein # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 245 100.0 1e-65 MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAADAVFQQFGGGDVSGTLQDIDLIMDI PVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGV RITDIITPSERMRRLSR >gi|299856433|gb|ADWV01000018.1| GENE 60 64864 - 65868 1151 334 aa, chain - ## HITS:1 COG:ECs2684 KEGG:ns NR:ns ## COG: ECs2684 COG1868 # Protein_GI_number: 15831938 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Escherichia coli O157:H7 # 1 334 1 334 334 649 100.0 0 MGDSILSQAEIDALLNGDSEVKDEPTASVSGESDIRPYDPNTQRRVVRERLQALEIINER FARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNLNLIHLKPLRGTGLVVFSP SLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKLALEGYSDAWKAINPLEVEYV RSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNICLPFSMIEPLRELLVNPPLENSR NEDQNWRDNLVRQVQHSQLELVANFADISLRLSQILKLKPGDVLPIEKPDRIIAHVDGVP VLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK >gi|299856433|gb|ADWV01000018.1| GENE 61 65873 - 66337 504 154 aa, chain - ## HITS:1 COG:ECs2683 KEGG:ns NR:ns ## COG: ECs2683 COG1580 # Protein_GI_number: 15831937 # Func_class: N Cell motility # Function: Flagellar basal body-associated protein # Organism: Escherichia coli O157:H7 # 1 154 1 154 154 289 100.0 2e-78 MTDYAISKKSKRSLWIPILVFITLAACASAGYSYWHSHQVAADDKAQQRVVPSPVFYALD TFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATEEGKK NLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFILR >gi|299856433|gb|ADWV01000018.1| GENE 62 66442 - 67569 798 375 aa, chain - ## HITS:1 COG:fliK KEGG:ns NR:ns ## COG: fliK COG3144 # Protein_GI_number: 16129890 # Func_class: N Cell motility # Function: Flagellar hook-length control protein # Organism: Escherichia coli K12 # 1 375 1 375 375 518 96.0 1e-147 MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTDKAAPQVLVATDKPTTK GEPLVSEILADAQQADLLIPVDETPPVINDEQSTSTPLTTAQTMTLAAVAGNNTAKDEKA DDLNEDVTASLSALFAMLPGFDNTPKVTDVPSTVLPAEKPTLFTKLTSAQLTTAQPDDAP GTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPHQTQPLPTVAAPVLSAPLGSHEW QQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLKVDDNQAQIQMVSPHQHVRAALEAA LPVLRTQLAESGIQLGQSNISGESFSGQQQAASQQQQSQRTANHEPLAGEDDDTLPVPVS LQVRVTGNSGVDIFA >gi|299856433|gb|ADWV01000018.1| GENE 63 67566 - 68009 516 147 aa, chain - ## HITS:1 COG:fliJ KEGG:ns NR:ns ## COG: fliJ COG2882 # Protein_GI_number: 16129889 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellar biosynthesis chaperone # Organism: Escherichia coli K12 # 1 147 1 147 147 205 98.0 2e-53 MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRINLNSDMSAG MTSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNSWREKKQRLQAWQTLQERQST AALLAENRLDQKKMDEFAQRAAMRKPE >gi|299856433|gb|ADWV01000018.1| GENE 64 68028 - 69401 1636 457 aa, chain - ## HITS:1 COG:ZfliI KEGG:ns NR:ns ## COG: ZfliI COG1157 # Protein_GI_number: 15802376 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway ATPase # Organism: Escherichia coli O157:H7 EDL933 # 13 457 52 496 496 826 100.0 0 MTTRLTRWLTTLDNFEAKMAQLPAVRRYGRLTRATGLVLEATGLQLPLGATCVIERQNGS ETHEVESEVVGFNGQRLFLMPLEEVEGVLPGARVYAKNISAEGLQSGKQLPLGPALLGRV LDGSGKPLDGLPSPDTTETGALITPPFNPLQRTPIEHVLDTGVRPINALLTVGRGQRMGL FAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPAD VSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPS VFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEA GHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDPMLDK AIALWPQLEGYLQQGIFERADWEASLQGLERIFPTVS >gi|299856433|gb|ADWV01000018.1| GENE 65 69401 - 70087 843 228 aa, chain - ## HITS:1 COG:fliH KEGG:ns NR:ns ## COG: fliH COG1317 # Protein_GI_number: 16129887 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway protein # Organism: Escherichia coli K12 # 1 228 8 235 235 364 99.0 1e-101 MSDNLPWKTWTPDDLAPPQAEFVPMVEPEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGI AEGRQQGHKQGYQEGLAQGLEQGLAEAKSQQAPIHARMQQLVSEFQTTLDALDSVIASRL MQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLGAT LSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCRLAAPGVV >gi|299856433|gb|ADWV01000018.1| GENE 66 70080 - 71075 1331 331 aa, chain - ## HITS:1 COG:ECs2678 KEGG:ns NR:ns ## COG: ECs2678 COG1536 # Protein_GI_number: 15831932 # Func_class: N Cell motility # Function: Flagellar motor switch protein # Organism: Escherichia coli O157:H7 # 1 331 1 331 331 551 100.0 1e-157 MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANVTQISNKQLTDVLAEFE QEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILETRDTASGIETLNFMEPQSAAD LIRDEHPQIIATILVHLKRAQAADILALFDERLRHDVMLRIATFGGVQPAALAELTEVLN GLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAVREFDGELAQKIIDEMFLFENLV DVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLRNMSQRAADILRDDLANRGPVRLSQ VENEQKAILLIVRRLAETGEMVIGSGEDTYV >gi|299856433|gb|ADWV01000018.1| GENE 67 71068 - 72726 1640 552 aa, chain - ## HITS:1 COG:fliF KEGG:ns NR:ns ## COG: fliF COG1766 # Protein_GI_number: 16129885 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis/type III secretory pathway lipoprotein # Organism: Escherichia coli K12 # 1 552 1 552 552 959 99.0 0 MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAKAPDYRTLFSNLSDQDG GAIVSQLTQMNIPYRVSEASGAIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQEKFGI SQFSEQVNYQRALEGELSRTIETIGPVKGARVHLAMPKPSLFVREQKSPSASVTVNLLPG RALDEGQISAIVHLVSSAVAGLPPGNVTLVDQGGHLLTQSNTSGRDLNDAQLKYASDVEG RIQRRIEAILSPIVGNGNIHAQVTAQLDFASKEQTEEQYRPNGDESQAALRSRQLNESEQ SGSGYPGGVPGALSNQPAPANNAPISTPPANQNNRQQQASTTSNSGPRSTQRNETSNYEV DRTIRHTKMNVGDVQRLSVAVVVNYKTLPDGKPVPLSNEQMKQIEDLTREAMGFSEKRGD SLNVVNSPFNSSDESGGELPFWQQQAFIDQLLAAGRWLLVLLVAWLLWRKAVRPQLTRRA EAMKAVQQQAQAREEVEDAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDNDPRVVA LVIRQWINNDHE >gi|299856433|gb|ADWV01000018.1| GENE 68 72941 - 73255 462 104 aa, chain + ## HITS:1 COG:ECs2676 KEGG:ns NR:ns ## COG: ECs2676 COG1677 # Protein_GI_number: 15831930 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar hook-basal body protein # Organism: Escherichia coli O157:H7 # 1 104 1 104 104 144 99.0 5e-35 MSAIQGIEGVISQLQATAMSARAQDSLPQPTISFAGQLHAALDRISDTQTAARTQAEKFT LGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV >gi|299856433|gb|ADWV01000018.1| GENE 69 73648 - 74316 561 222 aa, chain - ## HITS:1 COG:ZyedK KEGG:ns NR:ns ## COG: ZyedK COG2135 # Protein_GI_number: 15802366 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 1 222 1 222 222 444 98.0 1e-125 MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKVLLLSERDEHLHLDPVF WGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIYR ADGQPVFMAAIGSTPFERGDEAEGFLIVTAAADQGLVDIHDRRPLVLSPEAAREWMRQEI GGKEASEIATNGCVPANQFTWHPVSRAVGNVKNQGAELIQPV >gi|299856433|gb|ADWV01000018.1| GENE 70 74425 - 74658 329 77 aa, chain - ## HITS:1 COG:ECs2669 KEGG:ns NR:ns ## COG: ECs2669 COG0425 # Protein_GI_number: 15831923 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli O157:H7 # 1 77 1 77 77 144 98.0 3e-35 MKNIIPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYT VLDIQQDGPTIRYLIQK >gi|299856433|gb|ADWV01000018.1| GENE 71 74655 - 75860 1574 401 aa, chain - ## HITS:1 COG:yedE KEGG:ns NR:ns ## COG: yedE COG2391 # Protein_GI_number: 16129876 # Func_class: R General function prediction only # Function: Predicted transporter component # Organism: Escherichia coli K12 # 1 401 1 401 401 706 99.0 0 MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQLLQLFGVHA EEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVKLRMPRSRIRIMQAIIGGI IAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSWFGARFTLLPIFRIPVKMQKV SAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQPKLGLAMLFGVGFGLLIERAQI CFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYVQLGVEPKIMWAGPNAVIGGLLFGF GIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGSTILAYYWDDFAPALATDWDKINLLKT FGPMGGLLVTYLLLFTALMLIIGWEKRFFRRAAPQTAKEIA >gi|299856433|gb|ADWV01000018.1| GENE 72 76047 - 76460 563 137 aa, chain + ## HITS:1 COG:no KEGG:SDY_1087 NR:ns ## KEGG: SDY_1087 # Name: yedD # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 137 1 137 137 265 100.0 4e-70 MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTK EGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPT AECAAALDKAPLPTPLP >gi|299856433|gb|ADWV01000018.1| GENE 73 76494 - 77981 1525 495 aa, chain - ## HITS:1 COG:amyA KEGG:ns NR:ns ## COG: amyA COG0366 # Protein_GI_number: 16129874 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 495 1 495 495 1030 99.0 0 MRNPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPAYKGASGGYSVGYDSYD LFDLGEFDQKGSIPTKYGDKAQLLAAIDALKRNDIAVLLDVVVNHKMGADEKEAIRVQRV NADDRTQIDEEIIECEGWTRYTFPARAGQYSKFIWDFKCFSGIDHIENPDEDGIFKIVND YTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKYWARWVMEQTQCDGFRLDAVKHI PAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQTYIDQVEGKTMLFDAPLQMKFHEAS RMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQPLQALEAPVEPWFKPLAYALILLREN GVPSVFYPDLYGAHYEDVGGDGQTYPIDMPIIEQLDELILARQRFAHGVQTLFFDHPNCI AFSRSGTDEYPGCVVVMSNGDDGEKTINLGENYGNKTWRDFLGNRQESVVTDENGEATFF CNGGSVSVWVIEEVI >gi|299856433|gb|ADWV01000018.1| GENE 74 78059 - 78424 480 121 aa, chain - ## HITS:1 COG:no KEGG:ECO103_2182 NR:ns ## KEGG: ECO103_2182 # Name: fliT # Def: flagellar biosynthesis protein FliT # Organism: E.coli_O103_H2 # Pathway: Flagellar assembly [PATH:eoh02040] # 1 121 1 121 121 206 100.0 2e-52 MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVAPSTTM QEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNF S >gi|299856433|gb|ADWV01000018.1| GENE 75 78424 - 78834 451 136 aa, chain - ## HITS:1 COG:ECs2664 KEGG:ns NR:ns ## COG: ECs2664 COG1516 # Protein_GI_number: 15831918 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport; O Posttranslational modification, protein turnover, chaperones # Function: Flagellin-specific chaperone FliS # Organism: Escherichia coli O157:H7 # 1 136 1 136 136 224 99.0 3e-59 MYAAKGTQAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRARLFMQDNNQQGKGVSLSK AINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLRNDVSAVEEVEALMRNIAD AWKESLLSPSLIQDPV >gi|299856433|gb|ADWV01000018.1| GENE 76 78859 - 80265 1287 468 aa, chain - ## HITS:1 COG:ECs2663 KEGG:ns NR:ns ## COG: ECs2663 COG1345 # Protein_GI_number: 15831917 # Func_class: N Cell motility # Function: Flagellar capping protein # Organism: Escherichia coli O157:H7 # 1 468 1 465 465 541 98.0 1e-154 MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSNYKTLAQIGITTDPSDGKLELDAD KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK >gi|299856433|gb|ADWV01000018.1| GENE 77 80531 - 82198 1152 555 aa, chain + ## HITS:1 COG:ECs2662 KEGG:ns NR:ns ## COG: ECs2662 COG1344 # Protein_GI_number: 15831916 # Func_class: N Cell motility # Function: Flagellin and related hook-associated proteins # Organism: Escherichia coli O157:H7 # 1 555 1 585 585 358 56.0 1e-98 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG LTQAARNANDGISVAQTTEGALSEINNNLQRIRELTVQASTGTNSDSDLDSIQDEIKSRL DEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDLKKIDSDTLGLSGFNVNGGGA VANTAATKDDLVAASVSAAVGNEYTVSAGLSKSTAADVIASLTDGATVTAAGVSNGFAAG ATGDAYKFNQANNTFTYNTTSTAAELQSYLTPKAGDTATFSVEIGGTKQDVVLASDGKIT AKDGSKLYIDTTGNLTQNGGGTLEEATLNGLAFNHSGPAAAVQSTITTADGTSIVLAGSG DFGTTKTAGAINVTGAVISADALLSASKATGFTSGTYTVGTDGVVKSGGNDVYNKADGTG LTTDNTTKYYLQDDGSVTNGSGKAVYADATGKLTTDAETKAETTADPLKALDEAISSIDK FRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLA KANQVPQQVLSLLQG >gi|299856433|gb|ADWV01000018.1| GENE 78 82518 - 83237 813 239 aa, chain + ## HITS:1 COG:ECs2661 KEGG:ns NR:ns ## COG: ECs2661 COG1191 # Protein_GI_number: 15831915 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 414 99.0 1e-115 MISLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEV AERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQ RVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL >gi|299856433|gb|ADWV01000018.1| GENE 79 83286 - 83834 366 182 aa, chain + ## HITS:1 COG:no KEGG:ECO111_2501 NR:ns ## KEGG: ECO111_2501 # Name: fliZ # Def: flagella biosynthesis protein FliZ # Organism: E.coli_O111_H- # Pathway: not_defined # 1 182 2 183 183 372 99.0 1e-102 MVQHLKRRPLSRYLKDFKHSQTHCAHCRKLLDRITLVRDGKIVNKIEISRLDMLLDENGW QVEQKSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEMSPGTVREYVVRLRRLGNHL HEQNISLDPLQDGFLDEILAPWLPTTSTNNYRIALRKYQHYQRQTCTGLVQKSSSLPASD IY >gi|299856433|gb|ADWV01000018.1| GENE 80 83922 - 84722 1284 266 aa, chain + ## HITS:1 COG:ECs2659 KEGG:ns NR:ns ## COG: ECs2659 COG0834 # Protein_GI_number: 15831913 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 488 99.0 1e-138 MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDD GKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDF STPYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDP TKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVN DAIAEMQKDGTLQALSEKWFGADVTK >gi|299856433|gb|ADWV01000018.1| GENE 81 84827 - 85813 1131 328 aa, chain + ## HITS:1 COG:yedO KEGG:ns NR:ns ## COG: yedO COG2515 # Protein_GI_number: 16129866 # Func_class: E Amino acid transport and metabolism # Function: 1-aminocyclopropane-1-carboxylate deaminase # Organism: Escherichia coli K12 # 1 328 33 360 360 647 100.0 0 MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAA DALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLD LFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQC EGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGIS QKRFKDEGPILFIHTGGAPALFAYHPHV >gi|299856433|gb|ADWV01000018.1| GENE 82 85828 - 86496 676 222 aa, chain + ## HITS:1 COG:yecS KEGG:ns NR:ns ## COG: yecS COG0765 # Protein_GI_number: 16129865 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Escherichia coli K12 # 1 222 1 222 222 396 100.0 1e-110 MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYIS IFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWE AAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITS RTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQEREPK >gi|299856433|gb|ADWV01000018.1| GENE 83 86493 - 87245 659 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 246 2 241 245 258 51 8e-68 MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTI TVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEE ATVRARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELV GEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGAAKALFADPQQPRT RQFLEKFLLQ >gi|299856433|gb|ADWV01000018.1| GENE 84 87511 - 88197 498 228 aa, chain + ## HITS:1 COG:sdiA KEGG:ns NR:ns ## COG: sdiA COG2771 # Protein_GI_number: 16129863 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Escherichia coli K12 # 1 228 13 240 240 446 98.0 1e-125 MLLRFQRMEAAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQ AKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGF LSFSRCSTREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILKWTA EGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI >gi|299856433|gb|ADWV01000018.1| GENE 85 88264 - 88488 367 74 aa, chain - ## HITS:1 COG:no KEGG:ECDH10B_2056 NR:ns ## KEGG: ECDH10B_2056 # Name: yecF # Def: hypothetical protein # Organism: E.coli_DH10B # Pathway: not_defined # 1 74 1 74 74 103 100.0 1e-21 MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLKMEKQLALIEDETQAAV FSKTVKQIKQAYRQ >gi|299856433|gb|ADWV01000018.1| GENE 86 88947 - 89603 498 218 aa, chain + ## HITS:1 COG:uvrY KEGG:ns NR:ns ## COG: uvrY COG2197 # Protein_GI_number: 16129861 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli K12 # 1 218 1 218 218 416 100.0 1e-116 MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGI GGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYS GQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKT VNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ >gi|299856433|gb|ADWV01000018.1| GENE 87 89666 - 91432 1558 588 aa, chain + ## HITS:1 COG:ECs2651 KEGG:ns NR:ns ## COG: ECs2651 COG0322 # Protein_GI_number: 15831905 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Escherichia coli O157:H7 # 1 588 1 588 588 1192 99.0 0 MYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEAMVAQIQQIDVTVTHTETEALLLEH NYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETL ALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGK DDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAG MACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFN LSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTA LASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAM NQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADR KAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIE GVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH >gi|299856433|gb|ADWV01000018.1| GENE 88 91489 - 92037 264 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 9 175 486 665 904 106 38 5e-22 MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQST RFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIAREIIISALREWMAELGKRSS VAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVAAVLTLWSMLQYLSAARADLL DQ >gi|299856433|gb|ADWV01000018.1| GENE 89 92687 - 93352 763 221 aa, chain + ## HITS:1 COG:yecA KEGG:ns NR:ns ## COG: yecA COG3318 # Protein_GI_number: 16129858 # Func_class: R General function prediction only # Function: Predicted metal-binding protein related to the C-terminal domain of SecA # Organism: Escherichia coli K12 # 1 221 1 221 221 437 100.0 1e-122 MKTGPLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSPQEIEPEQWLVAVWGGA DYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFGLREVDGSELTIVEEWCFG YMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMSPEAFEESVDAIRLAALDLHA YWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQCCLH >gi|299856433|gb|ADWV01000018.1| GENE 90 93414 - 94592 1136 392 aa, chain - ## HITS:1 COG:ECs2615 KEGG:ns NR:ns ## COG: ECs2615 COG0814 # Protein_GI_number: 15831869 # Func_class: E Amino acid transport and metabolism # Function: Amino acid permeases # Organism: Escherichia coli O157:H7 # 1 392 12 403 403 643 99.0 0 MAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQHVPADTGLGTLA KRYLGRYGQWLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSATAGVLLFTFVA GGVVCVGTSLVDLFNRFLFSAKIIFLVVMLVLLLPHIHKVNLLTLPLQQGLALSAIPVIF TSFGFHGSVPSIVSYMDGNVRKLRWVFITGSAIPLVAYIFWQVATLGSIDSTTFMGLLAN HAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFDYLADLFQRSNTVGGR LQTGAITFLPPLAFALFYPRGFVMALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVK GGRPALVVVFLCGIAVIGVQFLIAAGLLPEVG >gi|299856433|gb|ADWV01000018.1| GENE 91 94816 - 95055 353 79 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_2201 NR:ns ## KEGG: ECUMN_2201 # Name: yecH # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 79 1 79 79 140 98.0 2e-32 MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSAEGMTAGELVAFLAAKG KFIPSEEGFSTDQSKICRH >gi|299856433|gb|ADWV01000018.1| GENE 92 95093 - 95590 680 165 aa, chain - ## HITS:1 COG:ECs2613 KEGG:ns NR:ns ## COG: ECs2613 COG1528 # Protein_GI_number: 15831867 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Escherichia coli O157:H7 # 1 165 1 165 165 291 100.0 3e-79 MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDY LTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFL QWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELSTLDTQN >gi|299856433|gb|ADWV01000018.1| GENE 93 95761 - 96084 59 107 aa, chain - ## HITS:1 COG:no KEGG:SSON_1214 NR:ns ## KEGG: SSON_1214 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 14 107 14 107 107 184 100.0 6e-46 MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRA CQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL >gi|299856433|gb|ADWV01000018.1| GENE 94 96548 - 96799 310 83 aa, chain + ## HITS:1 COG:no KEGG:B21_01860 NR:ns ## KEGG: B21_01860 # Name: yecJ # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 83 1 83 83 138 100.0 5e-32 MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQLKNIDFTNHPAAADPV TMRAIQKAIALIELKFTPQGESH >gi|299856433|gb|ADWV01000018.1| GENE 95 96878 - 97381 513 167 aa, chain - ## HITS:1 COG:ECs2610 KEGG:ns NR:ns ## COG: ECs2610 COG1528 # Protein_GI_number: 15831864 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 296 100.0 1e-80 MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLRAQAQSNVTQMMRMFNF MKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLAQLADEAKELNDDSTVNFL RDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLNVVSHQLH >gi|299856433|gb|ADWV01000018.1| GENE 96 98178 - 99167 1291 329 aa, chain + ## HITS:1 COG:araF KEGG:ns NR:ns ## COG: araF COG1879 # Protein_GI_number: 16129851 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 329 1 329 329 634 100.0 0 MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIK IAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKG KPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMD ALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATE GQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVAKDVEP PKFTEVTDVVLITRDNFKEELEKKGLGGK >gi|299856433|gb|ADWV01000018.1| GENE 97 99237 - 100751 183 504 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 275 477 20 217 245 75 25 1e-12 MQQSTPYLSFCGIGKTFPGVKALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPT TGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAENIYLGQLPHKGGIVNRSLL NYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREID NLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKDGRYVKTFTDMQQVDHDALVQAM VGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPISLAVRSGEIVGLFGLVGAGRSELMK GLFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMMLCPEDRKAEGIIPVHSVRDNINISAR RKHVLGGCVINNGWEENNADHHIRSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEEMKV ILLDEPTRGIDVGAKHEIYNVIYALAAQGVAVLFASSDLPEVLGVADRIVVMREGEIAGE LLHEQADERQALSLAMPKVSQAVA Prediction of potential genes in microbial genomes Time: Sun May 15 15:40:57 2011 Seq name: gi|299856432|gb|ADWV01000019.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont18.1, whole genome shotgun sequence Length of sequence - 88937 bp Number of predicted genes - 83, with homology - 83 Number of transcription units - 43, operones - 13 average op.length - 4.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 6/0.120 - CDS 269 - 814 460 ## COG4635 Flavodoxin 2 1 Op 2 4/0.560 - CDS 826 - 2277 1486 ## COG0168 Trk-type K+ transport systems, membrane components 3 1 Op 3 2/0.920 - CDS 2316 - 2858 505 ## COG1739 Uncharacterized conserved protein 4 1 Op 4 . - CDS 2930 - 4261 1667 ## COG0006 Xaa-Pro aminopeptidase - Prom 4383 - 4442 3.3 + Prom 4329 - 4388 6.1 5 2 Op 1 20/0.000 + CDS 4451 - 6640 2724 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 6 2 Op 2 . + CDS 6650 - 7813 1288 ## COG0183 Acetyl-CoA acetyltransferase + Term 7974 - 8006 2.1 7 3 Op 1 6/0.120 - CDS 8005 - 8706 789 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 8 3 Op 2 . - CDS 8752 - 10245 1632 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases - Prom 10320 - 10379 3.9 + Prom 10259 - 10318 6.4 9 4 Tu 1 . + CDS 10412 - 10900 398 ## COG0250 Transcription antiterminator + Term 10935 - 10972 1.0 10 5 Op 1 2/0.920 - CDS 10897 - 11679 572 ## COG0084 Mg-dependent DNase - Term 11687 - 11714 1.5 11 5 Op 2 28/0.000 - CDS 11721 - 12497 797 ## COG0805 Sec-independent protein secretion pathway component TatC 12 5 Op 3 16/0.000 - CDS 12500 - 13015 466 ## COG1826 Sec-independent protein secretion pathway components 13 5 Op 4 6/0.120 - CDS 13019 - 13288 200 ## PROTEIN SUPPORTED gi|90022866|ref|YP_528693.1| ribosomal protein L25 - Term 13311 - 13345 -1.0 14 5 Op 5 10/0.040 - CDS 13367 - 15007 1610 ## COG0661 Predicted unusual protein kinase 15 5 Op 6 7/0.120 - CDS 15004 - 15609 694 ## COG3165 Uncharacterized protein conserved in bacteria 16 5 Op 7 5/0.440 - CDS 15623 - 16378 363 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 - Prom 16405 - 16464 3.2 17 5 Op 8 4/0.560 - CDS 16473 - 17885 1670 ## COG1322 Uncharacterized protein conserved in bacteria - Prom 17932 - 17991 3.0 - Term 17989 - 18023 5.2 18 6 Tu 1 . - CDS 18040 - 18801 913 ## COG2820 Uridine phosphorylase - Prom 19048 - 19107 7.2 + Prom 18976 - 19035 5.3 19 7 Tu 1 . + CDS 19063 - 19878 791 ## COG0412 Dienelactone hydrolase and related enzymes + Term 19965 - 20002 1.8 - Term 19877 - 19909 6.3 20 8 Tu 1 . - CDS 19917 - 22178 2663 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 22226 - 22285 3.0 + Prom 22203 - 22262 4.9 21 9 Tu 1 . + CDS 22296 - 23249 716 ## COG0583 Transcriptional regulator 22 10 Op 1 3/0.720 - CDS 23137 - 24036 1039 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 23 10 Op 2 5/0.440 - CDS 24112 - 24912 954 ## COG0561 Predicted hydrolases of the HAD superfamily 24 10 Op 3 . - CDS 24920 - 25942 690 ## COG2267 Lysophospholipase - Prom 26088 - 26147 3.6 + Prom 25921 - 25980 4.9 25 11 Tu 1 . + CDS 26053 - 26673 582 ## COG1280 Putative threonine efflux protein + Term 26682 - 26723 6.4 - Term 26670 - 26711 2.6 26 12 Op 1 4/0.560 - CDS 26735 - 27355 773 ## COG1280 Putative threonine efflux protein 27 12 Op 2 5/0.440 - CDS 27419 - 29254 1980 ## COG0514 Superfamily II DNA helicase - Prom 29277 - 29336 4.5 - Term 29264 - 29297 4.5 28 13 Tu 1 . - CDS 29381 - 30250 1009 ## COG2829 Outer membrane phospholipase A - Prom 30363 - 30422 4.3 + Prom 30327 - 30386 5.2 29 14 Op 1 1/0.960 + CDS 30415 - 30882 464 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 30 14 Op 2 . + CDS 30934 - 31821 1018 ## COG2962 Predicted permeases + Term 31829 - 31874 8.5 - Term 31819 - 31858 5.0 31 15 Tu 1 . - CDS 31868 - 32167 101 ## EC55989_4295 conserved hypothetical protein, putative membrane protein - Prom 32211 - 32270 10.3 + Prom 32292 - 32351 11.1 32 16 Tu 1 . + CDS 32488 - 32766 81 ## ECSP_4872 hypothetical protein - Term 32735 - 32782 5.5 33 17 Tu 1 . - CDS 32791 - 32967 229 ## COG0598 Mg2+ and Co2+ transporters - Prom 33095 - 33154 4.9 + Prom 33018 - 33077 5.9 34 18 Op 1 . + CDS 33124 - 33972 357 ## ECIAI1_4008 hypothetical protein 35 18 Op 2 . + CDS 33969 - 34460 157 ## ECO103_4348 hypothetical protein - Term 34455 - 34494 6.0 36 19 Tu 1 . - CDS 34502 - 35452 1250 ## COG0598 Mg2+ and Co2+ transporters 37 20 Tu 1 . + CDS 35822 - 36586 741 ## COG3698 Predicted periplasmic protein - Term 36695 - 36719 -1.0 38 21 Tu 1 5/0.440 - CDS 36733 - 38895 2381 ## COG0210 Superfamily I DNA and RNA helicases - Term 38906 - 38949 5.0 39 22 Op 1 8/0.080 - CDS 38979 - 39695 502 ## COG1011 Predicted hydrolase (HAD superfamily) 40 22 Op 2 10/0.040 - CDS 39695 - 40591 859 ## COG4973 Site-specific recombinase XerC 41 22 Op 3 4/0.560 - CDS 40588 - 41295 768 ## COG3159 Uncharacterized protein conserved in bacteria 42 22 Op 4 1/0.960 - CDS 41292 - 42116 834 ## COG0253 Diaminopimelate epimerase 43 22 Op 5 . - CDS 42153 - 42356 219 ## COG5567 Predicted small periplasmic lipoprotein - Prom 42463 - 42522 4.0 44 23 Tu 1 . - CDS 42543 - 43028 85 ## SSON_3979 hypothetical protein + Prom 42736 - 42795 5.3 45 24 Tu 1 . + CDS 42819 - 43139 510 ## COG1965 Protein implicated in iron transport, frataxin homolog 46 25 Tu 1 . - CDS 43179 - 45725 2416 ## COG3072 Adenylate cyclase - Prom 45879 - 45938 5.3 + Prom 45910 - 45969 3.8 47 26 Op 1 23/0.000 + CDS 46112 - 47053 1022 ## COG0181 Porphobilinogen deaminase 48 26 Op 2 10/0.040 + CDS 47050 - 47790 512 ## COG1587 Uroporphyrinogen-III synthase 49 26 Op 3 11/0.040 + CDS 47812 - 49035 1410 ## COG2959 Uncharacterized enzyme of heme biosynthesis 50 26 Op 4 3/0.720 + CDS 49038 - 50234 1426 ## COG3071 Uncharacterized enzyme of heme biosynthesis + Term 50245 - 50279 4.6 + Prom 50727 - 50786 8.7 51 27 Tu 1 . + CDS 50913 - 51074 57 ## COG3119 Arylsulfatase A and related enzymes + Term 51134 - 51166 3.0 52 28 Tu 1 . - CDS 51158 - 52393 914 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) - Prom 52432 - 52491 3.2 - TRNA 52540 - 52616 92.7 # Pro TGG 0 0 - TRNA 52659 - 52745 69.1 # Leu CAG 0 0 - TRNA 52766 - 52841 84.9 # His GTG 0 0 - TRNA 52900 - 52976 89.5 # Arg CCG 0 0 53 29 Tu 1 . - CDS 53079 - 54464 1400 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 54565 - 54624 4.5 - Term 54600 - 54636 7.6 54 30 Op 1 . - CDS 54655 - 55395 882 ## COG1922 Teichoic acid biosynthesis proteins 55 30 Op 2 . - CDS 55398 - 56750 1418 ## ECH74115_5227 putative common antigen polymerase 56 30 Op 3 . - CDS 56747 - 57826 797 ## EC55989_4265 4-alpha-L-fucosyltransferase 57 30 Op 4 6/0.120 - CDS 57823 - 59073 1131 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 58 30 Op 5 4/0.560 - CDS 59075 - 60205 1290 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 59 30 Op 6 4/0.560 - CDS 60210 - 60884 444 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 60 30 Op 7 16/0.000 - CDS 60862 - 61743 1001 ## COG1209 dTDP-glucose pyrophosphorylase 61 30 Op 8 4/0.560 - CDS 61762 - 62829 1223 ## COG1088 dTDP-D-glucose 4,6-dehydratase 62 30 Op 9 10/0.040 - CDS 62829 - 64091 1248 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 63 30 Op 10 4/0.560 - CDS 64088 - 65218 1001 ## COG0381 UDP-N-acetylglucosamine 2-epimerase - Term 65226 - 65263 10.8 64 31 Op 1 5/0.440 - CDS 65274 - 66320 985 ## COG3765 Chain length determinant protein 65 31 Op 2 . - CDS 66332 - 67435 834 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 66 31 Op 3 . - CDS 67447 - 67665 156 ## ECO103_4381 hypothetical protein 67 31 Op 4 6/0.120 - CDS 67675 - 68934 1489 ## COG1158 Transcription termination factor - Prom 69116 - 69175 3.8 - Term 69175 - 69208 0.2 68 32 Tu 1 . - CDS 69261 - 69590 477 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 69701 - 69760 4.6 + Prom 69526 - 69585 2.4 69 33 Tu 1 . + CDS 69721 - 70986 1331 ## COG0513 Superfamily II DNA and RNA helicases 70 34 Tu 1 . + CDS 71120 - 72604 1713 ## COG0248 Exopolyphosphatase + Term 72614 - 72658 3.2 - Term 72549 - 72587 4.2 71 35 Tu 1 . - CDS 72651 - 74672 2207 ## COG0210 Superfamily I DNA and RNA helicases - Prom 74699 - 74758 3.2 + Prom 74666 - 74725 1.8 72 36 Tu 1 . + CDS 74889 - 75338 92 ## COG3692 Uncharacterized protein conserved in bacteria + Term 75412 - 75453 6.0 + Prom 75340 - 75399 2.3 73 37 Tu 1 . + CDS 75491 - 75772 327 ## COG0760 Parvulin-like peptidyl-prolyl isomerase - Term 75764 - 75802 10.2 74 38 Tu 1 . - CDS 75818 - 77293 2089 ## COG0059 Ketol-acid reductoisomerase - Prom 77347 - 77406 8.1 + Prom 77340 - 77399 4.5 75 39 Tu 1 . + CDS 77443 - 78336 860 ## COG0583 Transcriptional regulator + Term 78354 - 78391 6.1 - Term 78265 - 78295 1.0 76 40 Op 1 8/0.080 - CDS 78388 - 79932 1608 ## COG1171 Threonine dehydratase 77 40 Op 2 5/0.440 - CDS 79935 - 81785 2090 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 78 40 Op 3 5/0.440 - CDS 81850 - 82779 1154 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 79 40 Op 4 7/0.120 - CDS 82799 - 83062 254 ## COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit 80 40 Op 5 . - CDS 83059 - 84705 1435 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] + Prom 85031 - 85090 6.9 81 41 Tu 1 . + CDS 85295 - 86815 838 ## COG0606 Predicted ATPase with chaperone activity + Term 87064 - 87097 -0.2 82 42 Tu 1 . - CDS 86840 - 87178 451 ## COG3085 Uncharacterized protein conserved in bacteria - Prom 87257 - 87316 6.9 + Prom 87213 - 87272 6.1 83 43 Tu 1 . + CDS 87297 - 88136 599 ## COG0583 Transcriptional regulator + Term 88205 - 88238 3.1 - TRNA 88232 - 88307 82.1 # Trp CCA 0 0 - TRNA 88316 - 88392 90.7 # Asp GTC 0 0 - 5S_RRNA 88446 - 88576 98.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. Predicted protein(s) >gi|299856432|gb|ADWV01000019.1| GENE 1 269 - 814 460 181 aa, chain - ## HITS:1 COG:ECs4778 KEGG:ns NR:ns ## COG: ECs4778 COG4635 # Protein_GI_number: 15834032 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism # Function: Flavodoxin # Organism: Escherichia coli O157:H7 # 1 181 1 181 181 357 99.0 6e-99 MKTLILFSTRDGQTREIASYLASELKELGIQTDVANVHRIEEPQWENYDRVVIGASIRYG HYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTNSYARKFLMNSQWRPDRCA VIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTDWEQVANFAREIAHLTDKPTL K >gi|299856432|gb|ADWV01000019.1| GENE 2 826 - 2277 1486 483 aa, chain - ## HITS:1 COG:ECs4777 KEGG:ns NR:ns ## COG: ECs4777 COG0168 # Protein_GI_number: 15834031 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Escherichia coli O157:H7 # 1 483 1 483 483 848 100.0 0 MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFFVALAIGSMLWWPNRKE KGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGL DSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAE TAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATIAIGGFSTHDASIGYFDSPTINT IIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRMFIGVQFTLVVICTLVLWFHNVYSS ALMTINQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRIL LLFKQGNRELKRLVHPNAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAIIATGV DDFSAFASVVATLNNLGPGLGVVADNFTSMNPVAKWILIANMLFGRLEVFTLLVLFTPTF WRE >gi|299856432|gb|ADWV01000019.1| GENE 3 2316 - 2858 505 180 aa, chain - ## HITS:1 COG:yigZ KEGG:ns NR:ns ## COG: yigZ COG1739 # Protein_GI_number: 16131694 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 180 26 205 205 325 99.0 3e-89 MLAHTDGVEAAKAFVESVRAEHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPML AQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCE YSQLTGIEALLGQCDGKIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQLLAIEE >gi|299856432|gb|ADWV01000019.1| GENE 4 2930 - 4261 1667 443 aa, chain - ## HITS:1 COG:pepQ KEGG:ns NR:ns ## COG: pepQ COG0006 # Protein_GI_number: 16131693 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Escherichia coli K12 # 1 443 1 443 443 927 100.0 0 MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLDDHPYPFKVNPQFKAWV PVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTEDVEVIALPKADGIGSLLP AARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRSFKTEYELACMREAQKMAVNG HRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIVALNEHAAVLHYTKLDHQAPEEM RSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKDVNDEQLALIATMKAGVSYVDYHIQ FHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMPHGIGHPLGLQVHDVAGFMQDDSGTHL AAPAKYPYLRCTRILQPGMVLTIEPGIYFIESLLAPWREGQFSKHFNWQKIEALKPFGGI RIEDNVVIHENNVENMTRDLKLA >gi|299856432|gb|ADWV01000019.1| GENE 5 4451 - 6640 2724 729 aa, chain + ## HITS:1 COG:fadB_2 KEGG:ns NR:ns ## COG: fadB_2 COG1250 # Protein_GI_number: 16131692 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 307 729 1 423 423 831 98.0 0 MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSN KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCEC VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALK IGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGMV AQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVK GKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLL NKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDVVVEAVVENPKVKKAVLAETEQKVRP NTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAW ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYL LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDTIDALFDANRFGQKNGLGFWRYKEDSKGKP KKEEDAVVDDLLAEVSQPKRDFSEEEIIARMMIPMVNEVVRCLEESIIATPAEADMALVY GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPA RPVGDLKTA >gi|299856432|gb|ADWV01000019.1| GENE 6 6650 - 7813 1288 387 aa, chain + ## HITS:1 COG:ECs4773 KEGG:ns NR:ns ## COG: ECs4773 COG0183 # Protein_GI_number: 15834027 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Escherichia coli O157:H7 # 1 387 1 387 387 730 99.0 0 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQ TLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEH MGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAAT QSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATLRPAFDPVSGTVTAGTSSA LSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSVS DIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLM ERKDVQFGLATMCIGLGQGIATVFERV >gi|299856432|gb|ADWV01000019.1| GENE 7 8005 - 8706 789 233 aa, chain - ## HITS:1 COG:ECs4772 KEGG:ns NR:ns ## COG: ECs4772 COG0543 # Protein_GI_number: 15834026 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Escherichia coli O157:H7 # 1 233 1 233 233 480 100.0 1e-136 MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDERDKRPFSMASTPDEKGF IELHIGASEINLYAKAVMDRILKDHQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARS ILLTALARNPNRDITIYWGGREEQHLYDLCELEALSLKHPGLQVVPVVEQPEAGWRGRTG TVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSERNAREDRLFGDAFAFI >gi|299856432|gb|ADWV01000019.1| GENE 8 8752 - 10245 1632 497 aa, chain - ## HITS:1 COG:ubiD KEGG:ns NR:ns ## COG: ubiD COG0043 # Protein_GI_number: 16131689 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Escherichia coli K12 # 1 497 1 497 497 1034 99.0 0 MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYSM PVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNM PTKRLRGAPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLITWGLTVTRSPHKERQNLGIYR QQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVSVALGADPATILGAVTPVPDTLS EYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGYIEQGETAPEGPYGDHTGYYNEVDS FPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEG CSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTR MDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIKKDPDVVAH IDAIWDELAIFNNGKSA >gi|299856432|gb|ADWV01000019.1| GENE 9 10412 - 10900 398 162 aa, chain + ## HITS:1 COG:ECs4770 KEGG:ns NR:ns ## COG: ECs4770 COG0250 # Protein_GI_number: 15834024 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Escherichia coli O157:H7 # 1 162 1 162 162 330 100.0 9e-91 MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFD PEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPKDIVDPATPYPGDKVIITE GAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFRKL >gi|299856432|gb|ADWV01000019.1| GENE 10 10897 - 11679 572 260 aa, chain - ## HITS:1 COG:ZtatD KEGG:ns NR:ns ## COG: ZtatD COG0084 # Protein_GI_number: 15804431 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Escherichia coli O157:H7 EDL933 # 1 260 5 264 264 534 99.0 1e-152 MFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAG VHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADL NMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVARGIYIGITGWVCDE RRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGED AAWLAATTDANVKTLFGIAF >gi|299856432|gb|ADWV01000019.1| GENE 11 11721 - 12497 797 258 aa, chain - ## HITS:1 COG:ECs4768 KEGG:ns NR:ns ## COG: ECs4768 COG0805 # Protein_GI_number: 15834022 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 465 100.0 1e-131 MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMI ATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYI GMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCW MGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEIGVFFSRFYVGKG RNREEENDAEAESEKTEE >gi|299856432|gb|ADWV01000019.1| GENE 12 12500 - 13015 466 171 aa, chain - ## HITS:1 COG:ECs4767 KEGG:ns NR:ns ## COG: ECs4767 COG1826 # Protein_GI_number: 15834021 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Escherichia coli O157:H7 # 1 171 1 171 171 267 100.0 9e-72 MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQ DSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPEKASDEAHTIHNPVVKDNE AAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKTAAPSPSSSDKP >gi|299856432|gb|ADWV01000019.1| GENE 13 13019 - 13288 200 89 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90022866|ref|YP_528693.1| ribosomal protein L25 [Saccharophagus degradans 2-40] # 1 79 3 81 83 81 51 1e-14 MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFT AKTIADKQADTNQEQAKTEDAKRHDKEQV >gi|299856432|gb|ADWV01000019.1| GENE 14 13367 - 15007 1610 546 aa, chain - ## HITS:1 COG:ECs4765 KEGG:ns NR:ns ## COG: ECs4765 COG0661 # Protein_GI_number: 15834019 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Escherichia coli O157:H7 # 1 546 1 546 546 1109 100.0 0 MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLA LQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEA WFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRL LPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGM MVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEH PENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFE FAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLY PQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQH SVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFV GWRKTR >gi|299856432|gb|ADWV01000019.1| GENE 15 15004 - 15609 694 201 aa, chain - ## HITS:1 COG:yigP KEGG:ns NR:ns ## COG: yigP COG3165 # Protein_GI_number: 16131683 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 201 1 201 201 375 100.0 1e-104 MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGFSTSLILVFSERQVDVL GEWAGDADCTVIAYASVLPKLRDRQQLTALIRSGELEVQGDIQVVQNFVALADLAEFDPA ELLAPYTGDIAAEGISKAMRGGAKFLHHGIKRQQRYVAEAITEEWRMAPGPLEVAWFAEE TAAVERAVDALTKRLEKLEAK >gi|299856432|gb|ADWV01000019.1| GENE 16 15623 - 16378 363 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 28 250 1 221 221 144 34 2e-33 MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSG VRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYV QANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLS KAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNLTA GVVALHRGYKF >gi|299856432|gb|ADWV01000019.1| GENE 17 16473 - 17885 1670 470 aa, chain - ## HITS:1 COG:ECs4762 KEGG:ns NR:ns ## COG: ECs4762 COG1322 # Protein_GI_number: 15834016 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 470 6 475 475 805 100.0 0 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELL NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR GLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR >gi|299856432|gb|ADWV01000019.1| GENE 18 18040 - 18801 913 253 aa, chain - ## HITS:1 COG:ECs4761 KEGG:ns NR:ns ## COG: ECs4761 COG2820 # Protein_GI_number: 15834015 # Func_class: F Nucleotide transport and metabolism # Function: Uridine phosphorylase # Organism: Escherichia coli O157:H7 # 1 253 1 253 253 487 100.0 1e-137 MSKSDVFHLGLTKNDLQGATLAIVPGDPDRVEKIAALMDKPVKLASHREFTTWRAELDGK PVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGAS LHFAPLEFPAVADFECTTALVEAAKSIGATTHVGVTASSDTFYPGQERYDTYSGRVVRHF KGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPNAETMKQTESQ AVKIVVEAARRLL >gi|299856432|gb|ADWV01000019.1| GENE 19 19063 - 19878 791 271 aa, chain + ## HITS:1 COG:ECs4760 KEGG:ns NR:ns ## COG: ECs4760 COG0412 # Protein_GI_number: 15834014 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Escherichia coli O157:H7 # 1 271 23 293 293 543 98.0 1e-154 MATTQQSGFTPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPAYHARPKQSDGQLPVVI VVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQV LADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLN SPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQALRAANAKAEIIVYPDAGHAFNA DYRPSYHAESAKDGWQRMLEWFKQYGGKKSL >gi|299856432|gb|ADWV01000019.1| GENE 20 19917 - 22178 2663 753 aa, chain - ## HITS:1 COG:metE KEGG:ns NR:ns ## COG: metE COG0620 # Protein_GI_number: 16131678 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Escherichia coli K12 # 1 753 1 753 753 1517 98.0 0 MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLTVGRELRARHWDQQKQAGIDLLP VGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRGRAPTGEPAAAAEMTKWFN TNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHNVKPVLLGPVTYLWLGKVKGEQFDR LSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQVKLLL TTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLINGRNVWRAD LTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCHELALLR DALNSGDTAALAEWSAPIQARRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRAR FKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIRQAIVEQERLGLDVL VHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYA QSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDE PALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDAD VITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERL WVNPDCGLKTRGWPETRAALANMVQAAQNLRLG >gi|299856432|gb|ADWV01000019.1| GENE 21 22296 - 23249 716 317 aa, chain + ## HITS:1 COG:ECs4758 KEGG:ns NR:ns ## COG: ECs4758 COG0583 # Protein_GI_number: 15834012 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 614 100.0 1e-176 MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTP QGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQWLTPALENFHKNWPQVEM DFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFDYEVRLVLAPDHPLAAKTRIT PEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSVDNTLLLIQMVAARMGIAALPHW VVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQPVTEAFIRSARNHACDHLPFVKSAE RPTYDAPTVRPGSPARL >gi|299856432|gb|ADWV01000019.1| GENE 22 23137 - 24036 1039 299 aa, chain - ## HITS:1 COG:ECs4757 KEGG:ns NR:ns ## COG: ECs4757 COG0697 # Protein_GI_number: 15834011 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 540 100.0 1e-153 MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFLPFLRTRGNSLKTVGLY MLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIYDIMSKRRLRWGYAFSALL AVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKRLMETRPMPQHNAFAWFYLGA FLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIGYFMWNYGATQVDAGTLGIMNNM HVPAGLLVNLAIWHQQPHWPTFITGALVILASLWVHRKWVAPRSSQTADDRRRDCALSE >gi|299856432|gb|ADWV01000019.1| GENE 23 24112 - 24912 954 266 aa, chain - ## HITS:1 COG:Z5347 KEGG:ns NR:ns ## COG: Z5347 COG0561 # Protein_GI_number: 15804418 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli O157:H7 EDL933 # 1 266 40 305 305 558 99.0 1e-159 MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGRHHVDVGQIRDNLEIKS YMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDIITNVYRDDEWFMNRHRPEE MRFFKEAVFKYALYEPGLLEPEGVSKVFFTCDSHEQLLPLEQAINARWGDRVNVSFSTLT CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGSAHQRLKD LHPELEVIGTNADDAVPHYLRKLYLS >gi|299856432|gb|ADWV01000019.1| GENE 24 24920 - 25942 690 340 aa, chain - ## HITS:1 COG:ECs4755 KEGG:ns NR:ns ## COG: ECs4755 COG2267 # Protein_GI_number: 15834009 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Escherichia coli O157:H7 # 1 340 1 340 340 699 99.0 0 MFQQQKDWETRENAFAAFTMGPLTDFWRQRDEAEFTGVDDIPVRFVRFRAQHHDRVVVIC PGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADPHLGHVNRFNDYVDDLAAF WQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPGVCDAIALTAPMFGIVIRMPSFMARQI LNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRYRRNLRFYADDPTIRVGGPTYHW VRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNRMHDRFCELRTAAGHPVEGGRPLVI KGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSGNRSTEV >gi|299856432|gb|ADWV01000019.1| GENE 25 26053 - 26673 582 206 aa, chain + ## HITS:1 COG:ECs4754 KEGG:ns NR:ns ## COG: ECs4754 COG1280 # Protein_GI_number: 15834008 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 352 100.0 3e-97 MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIAGLQTGLAIHIVLVGVG LGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSLASTQSRRHLFQRAVFVNL TNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDIIVMIGYATLAQRIALWIKGPK QMKALNKIFGSLFMLVGALLASARHA >gi|299856432|gb|ADWV01000019.1| GENE 26 26735 - 27355 773 206 aa, chain - ## HITS:1 COG:ECs4753 KEGG:ns NR:ns ## COG: ECs4753 COG1280 # Protein_GI_number: 15834007 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 364 100.0 1e-101 MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGL HLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLL TNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTVVASLFALPQMRRGY QRLAKWIDGFAGALFAGFGIHLIISR >gi|299856432|gb|ADWV01000019.1| GENE 27 27419 - 29254 1980 611 aa, chain - ## HITS:1 COG:ECs4752 KEGG:ns NR:ns ## COG: ECs4752 COG0514 # Protein_GI_number: 15834006 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Escherichia coli O157:H7 # 1 611 1 611 611 1255 100.0 0 MNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQ IPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRL LYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFM ALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKS GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGM GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQG QLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQI ALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIH LGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAK LRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMAL IRAHVDGDDEE >gi|299856432|gb|ADWV01000019.1| GENE 28 29381 - 30250 1009 289 aa, chain - ## HITS:1 COG:ECs4751 KEGG:ns NR:ns ## COG: ECs4751 COG2829 # Protein_GI_number: 15834005 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane phospholipase A # Organism: Escherichia coli O157:H7 # 1 289 1 289 289 572 100.0 1e-163 MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYL IYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQL SNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYT RLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGY GGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF >gi|299856432|gb|ADWV01000019.1| GENE 29 30415 - 30882 464 155 aa, chain + ## HITS:1 COG:ECs4750 KEGG:ns NR:ns ## COG: ECs4750 COG2050 # Protein_GI_number: 15834004 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli O157:H7 # 1 155 7 161 161 295 100.0 2e-80 MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAFKNQPMMVGNWAQSILH GGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGERFTAT SSLLRAGNKVAVARVELHNEEQLYIASATATYMVG >gi|299856432|gb|ADWV01000019.1| GENE 30 30934 - 31821 1018 295 aa, chain + ## HITS:1 COG:ECs4749 KEGG:ns NR:ns ## COG: ECs4749 COG2962 # Protein_GI_number: 15834003 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Escherichia coli O157:H7 # 1 295 1 295 295 509 99.0 1e-144 MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQW SYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF LGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGML IETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLS TLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRKS >gi|299856432|gb|ADWV01000019.1| GENE 31 31868 - 32167 101 99 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4295 NR:ns ## KEGG: EC55989_4295 # Name: not_defined # Def: conserved hypothetical protein, putative membrane protein # Organism: E.coli_55989 # Pathway: not_defined # 1 99 16 114 114 159 100.0 4e-38 MGNGNFWQLFLGKEPYSKKSDFVKAWLLWWAITILVLFILSLTTTLNLRSIGIGLSFGFC QILGRYTMSLGWSKYWGVLGVLPVTNIVLFLILIFFKKR >gi|299856432|gb|ADWV01000019.1| GENE 32 32488 - 32766 81 92 aa, chain + ## HITS:1 COG:no KEGG:ECSP_4872 NR:ns ## KEGG: ECSP_4872 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 92 37 128 128 147 98.0 1e-34 MNDINLALSFILVINNTYVNINIGAKRIRDTGCKAIYFVLISLGLTLFSIISAAIEGVRC ESLSVQLNVAWILFTTIMLSAIPSAKMSLSAH >gi|299856432|gb|ADWV01000019.1| GENE 33 32791 - 32967 229 58 aa, chain - ## HITS:1 COG:STM3952 KEGG:ns NR:ns ## COG: STM3952 COG0598 # Protein_GI_number: 16767222 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Salmonella typhimurium LT2 # 9 58 267 316 316 103 90.0 1e-22 MLNLPIRKLFPTRIASSYGMNFEFMPELKWGFGYPGAIIFMILAGLTPYLYFKRKNWL >gi|299856432|gb|ADWV01000019.1| GENE 34 33124 - 33972 357 282 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_4008 NR:ns ## KEGG: ECIAI1_4008 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 282 3 284 284 551 100.0 1e-156 MNNILLPPINIPCTLFETISLFDDFSADDMQYGDMVEQDFLSLGLSDISAKVDPYRLIKY HFPGPGSINVAFSASSSGTKISQRECTDILFAEMKELAKMLSFFGQYKTLIEDLIEHFRY GNGSNFHSQQLNLSFHEKINKYGYNSPIRIIKECIENGINSTPSTGYQPLILQSIKTKLL SSRLNKFNDFEDSFNGLGISVHDISAQKISLLSFQKYAIGWSATIHFVAQDHFGLDVTDI KNKTYSKYRFFRIWFFLQRHKDFAFKPFFTNFNTIERIENYL >gi|299856432|gb|ADWV01000019.1| GENE 35 33969 - 34460 157 163 aa, chain + ## HITS:1 COG:no KEGG:ECO103_4348 NR:ns ## KEGG: ECO103_4348 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 163 1 163 163 322 100.0 2e-87 MKSKLQKIILCLFLLCCIYNLWTLRPVQILYTYSDAGNSVFLVVDHLPWTDSDKINWYLK HQNEIKNQHPLPEGSWHTWYVIDIGNGFTDYKKYIEGPYEDLYCFPTIKSNDNCIVKNYL MVINEYPYRNTHIGINDFTEYQLTQENKIERVFNPHDFKKDNF >gi|299856432|gb|ADWV01000019.1| GENE 36 34502 - 35452 1250 316 aa, chain - ## HITS:1 COG:ECs4746 KEGG:ns NR:ns ## COG: ECs4746 COG0598 # Protein_GI_number: 15834000 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 607 100.0 1e-174 MLSAFQLENNRLTRLEVEESQPLVNAVWIDLVEPDDDERLRVQSELGQSLATRPELEDIE ASARFFEDDDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLFTLRERELPAFRLYRMRAR SQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSRVIMEGHQGDEYDEALSTLAE LEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQAREILRDIESLLPHNESLFQKVNFL MQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSYGMNFEFMPELKWSFGYPGAIIFMI LAGLAPYLYFKRKNWL >gi|299856432|gb|ADWV01000019.1| GENE 37 35822 - 36586 741 254 aa, chain + ## HITS:1 COG:ECs4745 KEGG:ns NR:ns ## COG: ECs4745 COG3698 # Protein_GI_number: 15833999 # Func_class: S Function unknown # Function: Predicted periplasmic protein # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 519 99.0 1e-147 MAHRLLIGKGMITLNLKRIFLTLTLLPLFAVAADDCALSDPTLTVQAYTVNPQTERVKMY WQKANGEAWGTLHALLADMNSQGQVQMAMNGGIYDESYAPLGLYIENGQQKVALNLASGE GNFFIRPGGVFYVAGDKVGIVRLDAFKTSKEIQFAVQSGPMLMENSVINPRIHPNVASRK IRNGVGINKHGNAVFLLSQQATNFYDFACYAKAKLNVEQLLYLDGTISHMYMKGGAIPWQ RYPFVTMISVERKG >gi|299856432|gb|ADWV01000019.1| GENE 38 36733 - 38895 2381 720 aa, chain - ## HITS:1 COG:uvrD KEGG:ns NR:ns ## COG: uvrD COG0210 # Protein_GI_number: 16131665 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli K12 # 1 720 1 720 720 1436 100.0 0 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV >gi|299856432|gb|ADWV01000019.1| GENE 39 38979 - 39695 502 238 aa, chain - ## HITS:1 COG:yigB KEGG:ns NR:ns ## COG: yigB COG1011 # Protein_GI_number: 16131664 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli K12 # 1 238 1 238 238 486 100.0 1e-137 MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHPALRSFQNEDLQRLRQA VREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHD TLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHGRSKPFSDMYFLAAEKLNVPI GEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI >gi|299856432|gb|ADWV01000019.1| GENE 40 39695 - 40591 859 298 aa, chain - ## HITS:1 COG:xerC KEGG:ns NR:ns ## COG: xerC COG4973 # Protein_GI_number: 16131663 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerC # Organism: Escherichia coli K12 # 1 298 1 298 298 589 100.0 1e-168 MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENGLQSWQQCDVTMVRNFA VRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVSAPKAPRHLPKNIDVDDMN RLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLESGEVWVMGKGSKERRLP IGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNHVHPH KLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK >gi|299856432|gb|ADWV01000019.1| GENE 41 40588 - 41295 768 235 aa, chain - ## HITS:1 COG:yigA KEGG:ns NR:ns ## COG: yigA COG3159 # Protein_GI_number: 16131662 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 235 1 235 235 445 100.0 1e-125 MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA VGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV >gi|299856432|gb|ADWV01000019.1| GENE 42 41292 - 42116 834 274 aa, chain - ## HITS:1 COG:ECs4739 KEGG:ns NR:ns ## COG: ECs4739 COG0253 # Protein_GI_number: 15833993 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Escherichia coli O157:H7 # 1 274 2 275 275 568 100.0 1e-162 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE PNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLE SHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV ELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL >gi|299856432|gb|ADWV01000019.1| GENE 43 42153 - 42356 219 67 aa, chain - ## HITS:1 COG:Z5325 KEGG:ns NR:ns ## COG: Z5325 COG5567 # Protein_GI_number: 15804397 # Func_class: N Cell motility # Function: Predicted small periplasmic lipoprotein # Organism: Escherichia coli O157:H7 EDL933 # 1 67 1 67 67 109 100.0 1e-24 MKNVFKALTVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKPVETQTQSTVPDKNDRATGD GPSQVNY >gi|299856432|gb|ADWV01000019.1| GENE 44 42543 - 43028 85 161 aa, chain - ## HITS:1 COG:no KEGG:SSON_3979 NR:ns ## KEGG: SSON_3979 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 161 1 161 161 303 95.0 1e-81 MVAALFGCQPHLVQRLLAVNNDFAAVFKGNGQYAAVDFAVDIAVAIPVVQAFFNGQPELI SQAMKFTVVHCCILFLSDGGSIAAWGQGFKVCTSAAAFRHDSSVTGIMMSQCSERFVSSL GRSYTTPFPVSGKHYDQVYRASILTLTELKKPTNKLHCDSA >gi|299856432|gb|ADWV01000019.1| GENE 45 42819 - 43139 510 106 aa, chain + ## HITS:1 COG:STM3943 KEGG:ns NR:ns ## COG: STM3943 COG1965 # Protein_GI_number: 16767214 # Func_class: P Inorganic ion transport and metabolism # Function: Protein implicated in iron transport, frataxin homolog # Organism: Salmonella typhimurium LT2 # 1 106 1 106 106 193 94.0 5e-50 MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQV WLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR >gi|299856432|gb|ADWV01000019.1| GENE 46 43179 - 45725 2416 848 aa, chain - ## HITS:1 COG:ECs4736 KEGG:ns NR:ns ## COG: ECs4736 COG3072 # Protein_GI_number: 15833990 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate cyclase # Organism: Escherichia coli O157:H7 # 1 848 1 848 848 1781 100.0 0 MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHYHHPLMPGYLDGNVPKG ICLYTPDETQRHYLNELELYRGMSVQDPPKGELPITGVYTMGSTSSVGQSCSSDLDIWVC HQSWLDSEERQLLQRKCSLLESWAASLGVEVSFFLIDENRFRHNESGSLGGEDCGSTQHI LLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMTLYAQGVLTPNEWLDLGGLSSLSA EEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYPNPRLLAKDIKQRLHDGEIVSFGLD PYCMMLERVTEYLTAIEDFTRLDLVRRCFYLKVCEKLSRERACVGWRRAVLSQLVSEWGW DEARLAMLDNRANWKIDQVREAHNELLDAMMQSYRNLIRFARRNNLSVSASPQDIGVLTR KLYAAFEALPGKVTLVNPQISPDLSEPNLTFIYVPPGRANRSGWYLYNRAPNIESIISHQ PLEYNRYLNKLVAWAWFNGLLTSRTRLYIKGNGIVDLPKLQEMVADVSHHFPLRLPAPTP KALYSPCEIRHLAIIVNLEYDPTAAFRNQVVHFDFRKLDVFSFGENQNCLVGSVDLLYRN SWNEVRTLHFNGEQSMIEALKTILGKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSE CIELRLSSTRQETGRFKALRVSGQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSV QVETNHVKLPAVVDGFASEGIIQFFFEETQDENGFNIYILDESNRVEVYHHCEGSKEELV RDVSRFYSSSHDRFTYGSSFINFNLPQFYQIVKVDGREQVIPFRTKSIGNMPPANQDHDT PLLQQYFS >gi|299856432|gb|ADWV01000019.1| GENE 47 46112 - 47053 1022 313 aa, chain + ## HITS:1 COG:ECs4735 KEGG:ns NR:ns ## COG: ECs4735 COG0181 # Protein_GI_number: 15833989 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Escherichia coli O157:H7 # 1 313 8 320 320 594 99.0 1e-170 MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKG LFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALP AGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLE SRIRAALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEG GCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQNAEQMGISLAEELLNNGAR EILAEVYNGDAPA >gi|299856432|gb|ADWV01000019.1| GENE 48 47050 - 47790 512 246 aa, chain + ## HITS:1 COG:hemD KEGG:ns NR:ns ## COG: hemD COG1587 # Protein_GI_number: 16131656 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Escherichia coli K12 # 1 246 1 246 246 471 99.0 1e-133 MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLADQLAALGESDLLFALS QHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPE LQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQSREVT MVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDA LLRALQ >gi|299856432|gb|ADWV01000019.1| GENE 49 47812 - 49035 1410 407 aa, chain + ## HITS:1 COG:hemX KEGG:ns NR:ns ## COG: hemX COG2959 # Protein_GI_number: 16131655 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Escherichia coli K12 # 1 407 1 393 393 583 96.0 1e-166 MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAIAIALAAGVGLYGWGKQ QAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAAQLKQANRQQETLAKQLDEVQQ KVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAALLKSADASLADMNDPSLITV RRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRLADNDSDGSPMDSDGEELSSSIS EWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQDIYLRENIRSRLLVAAQAVPRHQEE TYRQALENVSTWVRAYYDTDDATTKAFLDEVDQLSQQNISMDLPETLQSQAMLEKLMQTR VRNLLAQPAAGTTEAKPAPAPAPAPAPAPAPAPAPQGDTPAAAPQGE >gi|299856432|gb|ADWV01000019.1| GENE 50 49038 - 50234 1426 398 aa, chain + ## HITS:1 COG:ECs4732 KEGG:ns NR:ns ## COG: ECs4732 COG3071 # Protein_GI_number: 15833986 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of heme biosynthesis # Organism: Escherichia coli O157:H7 # 12 398 12 398 398 728 100.0 0 MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEW LLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMAKNADHAEQPVVN YLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRVRLQLARNENHAARHGVDKLL EVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQAR ADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLL PIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPD AYDYAWLADALDRLHKPEEAAAMRRDGLMLTLQNNPPQ >gi|299856432|gb|ADWV01000019.1| GENE 51 50913 - 51074 57 53 aa, chain + ## HITS:1 COG:aslA KEGG:ns NR:ns ## COG: aslA COG3119 # Protein_GI_number: 16131653 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Escherichia coli K12 # 1 46 1 46 551 86 95.0 1e-17 MEFSFSPKLFVVAVAAALPLMASAADTPSTATARKGFAGYDHPNQYPQNAAIY >gi|299856432|gb|ADWV01000019.1| GENE 52 51158 - 52393 914 411 aa, chain - ## HITS:1 COG:ECs4730 KEGG:ns NR:ns ## COG: ECs4730 COG0641 # Protein_GI_number: 15833984 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Escherichia coli O157:H7 # 1 411 1 411 411 873 98.0 0 MLQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYREKPVTHMDDDTLEAYVRHYIAA SEPQNEVAFTWQGGEPTLLGLDFYRRAVKLQAKYGAGRKISNSFQTNGVLLDDKWCAFLA ENHFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQ PLQVYDFLCDAGVEFIQFIPVVERLADETAASDGLKLHAPGDIQGELTEWSVRPDEFGEF LVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHY VYPQYRLGNMHQQTIAEMIDSPQQQVFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLD ASGKPGLNYLCAGYQRYFRHLPPYLKAMADLLAHGRPASDIMQAHLLVVNK >gi|299856432|gb|ADWV01000019.1| GENE 53 53079 - 54464 1400 461 aa, chain - ## HITS:1 COG:ECs4729 KEGG:ns NR:ns ## COG: ECs4729 COG1113 # Protein_GI_number: 15833983 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 461 1 461 461 808 100.0 0 MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIM RSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFP EMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMIVIGLGVIFFGFGNGG QSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV LWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCN SGMYSCGRMLYALAKNRQLPAAMAKVSRHGVPVAGVAVSIAILLIGSCLNYIIPNPQRVF VYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRSILFPWANYVTMAFLICVLIG MYFNEDTRMSLFVGIIFMLAVTAIYKVFGLNRHGKAHKLEE >gi|299856432|gb|ADWV01000019.1| GENE 54 54655 - 55395 882 246 aa, chain - ## HITS:1 COG:wecG KEGG:ns NR:ns ## COG: wecG COG1922 # Protein_GI_number: 16131650 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Teichoic acid biosynthesis proteins # Organism: Escherichia coli K12 # 1 246 1 246 246 476 99.0 1e-134 MNNNTTAPTYTLRGLQLIGWRDMQHALDYLFADGQLKQGTLVAINAEKMLTIEDNAEVRE LINAAEFKYADGISVVRSVRKKYPQAQVSRVAGADLWEELMARAGKEGTPVFLVGGKPEV LAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHASGAQIVTVAMGSPKQEIFMRDC RLVHPDALYMGVGGTYDVFTGHVKRAPKIWQTLGLEWLYRLLSQPSRIKRQLRLLRYLRW HYTGNL >gi|299856432|gb|ADWV01000019.1| GENE 55 55398 - 56750 1418 450 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_5227 NR:ns ## KEGG: ECH74115_5227 # Name: wzyE # Def: putative common antigen polymerase # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 450 1 450 450 749 100.0 0 MSLLQFSGLFVVWLLCTLFIATLTWFEFRRVRFNFNVFFSLLFLLTFFFGFPLTSVLVFR FDVGVAPPEILLQALLSAGCFYAVYYVTYKTRLRKRVADVPRRPLFTMNRVETNLTWVIL MGIALVSVGIFFMHNGFLLFRLNSYSQIFSSEVSGVALKRFFYFFIPAMLVVYFLRQDSK AWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIGIIRGWISLWMLAAAGVLGIVGM FWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLALLLQNYDNIDFQGLAPIVRDFYVF IPSWLWPGRPSMVLNSANYFTWEVLNNHSGLAISPTLIGSLVVMGGALFIPLGAIVVGLI IKWFDWLYELGNRETNRYKAAILHSFCFGAIFNMIVLAREGLDSFVSRVVFFIVVFGACL MIAKLLYWLFESAGLIHKRTKSSLRTQVEG >gi|299856432|gb|ADWV01000019.1| GENE 56 56747 - 57826 797 359 aa, chain - ## HITS:1 COG:no KEGG:EC55989_4265 NR:ns ## KEGG: EC55989_4265 # Name: rffT # Def: 4-alpha-L-fucosyltransferase # Organism: E.coli_55989 # Pathway: not_defined # 1 359 1 359 359 757 100.0 0 MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDDGLSDSCPALSVQFFPG KKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPSQFFWHIWGADLYELSSGL RYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGELLYFPTRMDPSLNTMANDRQR EGKMTILVGNSGDRSNDHIAALCAVHQQFGDTVKVVVPMGYPPNNEAYIEEVRQAGLELF SEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQGIGTLCLLIQAGIPCVLNRENPFWQ DMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKNTIAFFSPNYLQGWQRALAIAAGEVA >gi|299856432|gb|ADWV01000019.1| GENE 57 57823 - 59073 1131 416 aa, chain - ## HITS:1 COG:wzxE KEGG:ns NR:ns ## COG: wzxE COG2244 # Protein_GI_number: 16131648 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Escherichia coli K12 # 1 416 1 416 416 696 99.0 0 MSLAKASLWTAASTLVKIGAGLLVGKLLAVSFGPAGLGLAANFRQLITVLGVLAGAGIFN GVTKYVAQYHDNPQQLRRVVGTSSAMVLGFSTLMALVFVLAAAPISQGLFGNTDYQGLVR LVALVQMGIAWGNLLLALMKGFRDAAGNALSLIVGSLIGVLAYYVSYRLGGYEGALLGLA LIPALVVIPAAIMLIKRGVIPLSYLKPSWDNGLAGQLSKFTLMALITSVTLPVAYIMMRK LLAAQYSWDEVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLTEKRDITREVVKSLKFV LPAVAAASFTVWLLRDFAIWLLLSNKFTAMRDLFAWQLVGDVLKVGAYVFGYLVIAKASL RFYILAEISQFTLLMVFAHWLIPAHGALGAAQAYMATYIVYFSLCCGVFLLWRRRA >gi|299856432|gb|ADWV01000019.1| GENE 58 59075 - 60205 1290 376 aa, chain - ## HITS:1 COG:wecE KEGG:ns NR:ns ## COG: wecE COG0399 # Protein_GI_number: 16131647 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Escherichia coli K12 # 1 376 1 376 376 794 99.0 0 MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTASLE MAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRPDTMNIDETLIEAAITDKT RVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVISTYKGRALGTIGHIGCFSFHET KNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQA AYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGRIELPSIPDGCVQNAHMFYIKLRDI DDRSALINFLKEAEIMAVFHYIPLHGCPAGERFGEFHGEDRYTTKESERLLRLPLFYNLS PVNQRTVIATLLNYFS >gi|299856432|gb|ADWV01000019.1| GENE 59 60210 - 60884 444 224 aa, chain - ## HITS:1 COG:ECs4723 KEGG:ns NR:ns ## COG: ECs4723 COG0454 # Protein_GI_number: 15833977 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 44 224 1 181 181 322 98.0 3e-88 MPVRASIEPLTWENAFFGVNSAIVRITSEAPLLTPDVLAPWSRVQAKIAASNTGELDALQ QLGFSLVEGEVDLALPVNNVSDSGAVVAQETDIPALRQLASAAFAQSRFRAPWYAPDASR RFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNATDARIGLLAGRGAGAELMQT ALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVESTAYWLYR >gi|299856432|gb|ADWV01000019.1| GENE 60 60862 - 61743 1001 293 aa, chain - ## HITS:1 COG:rffH KEGG:ns NR:ns ## COG: rffH COG1209 # Protein_GI_number: 16131645 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Escherichia coli K12 # 1 293 1 293 293 596 100.0 1e-170 MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGY FQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETFLNGEPSCLVLGDNIFFGQGFSPKL RHVAARTEGATVFGYQVMDPERFGVVEFDDNFRAISLEEKPKQPKSNWAVTGLYFYDSKV VEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQTV EKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKTGYGQYLLELLRARPRQY >gi|299856432|gb|ADWV01000019.1| GENE 61 61762 - 62829 1223 355 aa, chain - ## HITS:1 COG:rffG KEGG:ns NR:ns ## COG: rffG COG1088 # Protein_GI_number: 16131644 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Escherichia coli K12 # 1 355 1 355 355 736 98.0 0 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSEHFAFEKVDI CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNTLT EDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL PTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVA TTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLR YAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQVQDGSYQGERLGLKG >gi|299856432|gb|ADWV01000019.1| GENE 62 62829 - 64091 1248 420 aa, chain - ## HITS:1 COG:ECs4720 KEGG:ns NR:ns ## COG: ECs4720 COG0677 # Protein_GI_number: 15833974 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 420 1 420 420 850 99.0 0 MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKT AVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAARSIAPVLKKGALVILEST SPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPERVLPGQVMVELIKNDRVIGGM TPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINV WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPQQARLIRTAREVNDHKPFWVI DQVKAAVADCLAATDKRASELKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVV EPNIHQLPKKLTGLCTLAQLDEALATADVLVMLVDHSQFKVINGDNVHQQYVVDAKGVWR >gi|299856432|gb|ADWV01000019.1| GENE 63 64088 - 65218 1001 376 aa, chain - ## HITS:1 COG:ECs4719 KEGG:ns NR:ns ## COG: ECs4719 COG0381 # Protein_GI_number: 15833973 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Escherichia coli O157:H7 # 1 376 15 390 390 749 99.0 0 MKVLTVFGTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNI MQPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGL RTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWV RDQVMSSDTLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQ IVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDSGGIQEEAPSL GKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVEEVTRLLKDENEYQTMSRAHNPYGDGQ ACSRILEALKNNRISL >gi|299856432|gb|ADWV01000019.1| GENE 64 65274 - 66320 985 348 aa, chain - ## HITS:1 COG:ECs4718 KEGG:ns NR:ns ## COG: ECs4718 COG3765 # Protein_GI_number: 15833972 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Chain length determinant protein # Organism: Escherichia coli O157:H7 # 1 348 2 349 349 679 99.0 0 MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIALAYTFFARQEWSATAI TDRPTVNMLGGYYSQQQFLRNLDARSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ TDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK >gi|299856432|gb|ADWV01000019.1| GENE 65 66332 - 67435 834 367 aa, chain - ## HITS:1 COG:rfe KEGG:ns NR:ns ## COG: rfe COG0472 # Protein_GI_number: 16131640 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Escherichia coli K12 # 1 367 1 367 367 615 100.0 1e-176 MNLLTVSTDLISIFLFTTLFLFFARKVAKKVGLVDKPNFRKRHQGLIPLVGGISVYAGIC FTFGIVDYYIPHASLYLACAGVLVFIGALDDRFDISVKIRATIQAAVGIVMMVFGKLYLS SLGYIFGSWEMVLGPFGYFLTLFAVWAAINAFNMVDGIDGLLGGLSCVSFAAIGMILWFD GQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDAGSTLIGFTVIWILLETTQGKTH PISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPDRQHIHHLIMRAGFTSRQAFVLITL AAALLASIGVLAEYSHFVPEWVMLVLFLLAFFLYGYCIKRAWKVARFIKRVKRRLRRNRG GSPNLTK >gi|299856432|gb|ADWV01000019.1| GENE 66 67447 - 67665 156 72 aa, chain - ## HITS:1 COG:no KEGG:ECO103_4381 NR:ns ## KEGG: ECO103_4381 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 72 1 72 72 135 100.0 6e-31 MPKTPRVYVAFCFYICNLNAALAMLGKFLEFAGMLCNLHIKWLIFAQDWWVRNGLSLLNK GLRGYTSANNFL >gi|299856432|gb|ADWV01000019.1| GENE 67 67675 - 68934 1489 419 aa, chain - ## HITS:1 COG:ECs4716 KEGG:ns NR:ns ## COG: ECs4716 COG1158 # Protein_GI_number: 15833970 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Escherichia coli O157:H7 # 1 419 1 419 419 815 100.0 0 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMKRS >gi|299856432|gb|ADWV01000019.1| GENE 68 69261 - 69590 477 109 aa, chain - ## HITS:1 COG:ECs4714 KEGG:ns NR:ns ## COG: ECs4714 COG0526 # Protein_GI_number: 15833968 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 109 19 127 127 221 100.0 2e-58 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLN IDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA >gi|299856432|gb|ADWV01000019.1| GENE 69 69721 - 70986 1331 421 aa, chain + ## HITS:1 COG:rhlB KEGG:ns NR:ns ## COG: rhlB COG0513 # Protein_GI_number: 16131636 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli K12 # 1 421 1 421 421 862 100.0 0 MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYG GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSN EEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS G >gi|299856432|gb|ADWV01000019.1| GENE 70 71120 - 72604 1713 494 aa, chain + ## HITS:1 COG:ECs4712 KEGG:ns NR:ns ## COG: ECs4712 COG0248 # Protein_GI_number: 15833966 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Escherichia coli O157:H7 # 1 494 1 494 494 961 100.0 0 MGSTSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAAGLNSENALSNEAMERG WQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIAKAQEILGCPVQVISGEEEARLI YQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSLSMGCVTWLERYFADRNLGQE NFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQALQEIMMAQGMDERITLEKLQQLK QRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIFTELNIQCMTLAGGALREGLVYGML HLAVEQDIRSRTLRNIQRRFMIDIDQAQRVAKVAANFFDQVENEWHLEAISRDLLISACQ LHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPAQKKLLATLLLNQTNPVDLSSLHQQNAVP PRVAEQLCRLLRLAIIFASRRRDDLVPEMTLQANHELLTLTLPQGWLTQHPLGKEIIAQE SQWQSYVHWPLEVH >gi|299856432|gb|ADWV01000019.1| GENE 71 72651 - 74672 2207 673 aa, chain - ## HITS:1 COG:ECs4711 KEGG:ns NR:ns ## COG: ECs4711 COG0210 # Protein_GI_number: 15833965 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 673 1 673 673 1323 100.0 0 MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAA REMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLKEL TEGLIEDDKVLLQQLISTISNWKNDLKTPAQAAAEAKGERDRIFAHCYGLYDAHLKACNV LDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVV GDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQNYRSSGRILKAANILIANNPHVFEK RLFSELGYGTELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYRGNHQSRVFEK FLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLKK LGEWAMTRNKSMFTASFDMGLSQTLSGRGYEALTRFTHWLAEIQRLAEREPIAAVRDLIH GMDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMM ERGESEEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGI TRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHL ANLKAMMAAKRGK >gi|299856432|gb|ADWV01000019.1| GENE 72 74889 - 75338 92 149 aa, chain + ## HITS:1 COG:yifNm KEGG:ns NR:ns ## COG: yifNm COG3692 # Protein_GI_number: 16132261 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 149 15 163 163 283 95.0 6e-77 MAINFSPKVGEILECNFGNYPVSQNGQISTAYYDGRIPPEMIKNRLVVVLNGKINGNACI VVPLSTTRDHDKLNRGMHVEIASNVINDLQFFDQQIRWAKADLVQQVSRNRLNRARTYRG YLNQCLPHELVADIQRAVIKSINAISLIN >gi|299856432|gb|ADWV01000019.1| GENE 73 75491 - 75772 327 93 aa, chain + ## HITS:1 COG:ECs4709 KEGG:ns NR:ns ## COG: ECs4709 COG0760 # Protein_GI_number: 15833963 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Escherichia coli O157:H7 # 1 93 1 93 93 186 98.0 8e-48 MAKTAAALHILVKEEKLALELLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVP AFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN >gi|299856432|gb|ADWV01000019.1| GENE 74 75818 - 77293 2089 491 aa, chain - ## HITS:1 COG:ilvC KEGG:ns NR:ns ## COG: ilvC COG0059 # Protein_GI_number: 16131632 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Escherichia coli K12 # 1 491 1 491 491 967 99.0 0 MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRDSG LDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVVNLTPDKQHSDVVRTVQP LMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPE NDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKL VEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDRLSNPAKLRAYALSEQLKEIMAPLF QKHMDDIISGEFSSGMMADWANDDKKLLTWREETGKTAFETAPQYEGKIGEQEYFDKGVL MIAMVKAGVELAFETMVDSGIIEESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYG NYLFSYACVPLLKPFMAELQPGDLGKAIPEGAVDNAQLRDVNEAIRSHAIEQVGKKLRGY MTDMKRIAVAG >gi|299856432|gb|ADWV01000019.1| GENE 75 77443 - 78336 860 297 aa, chain + ## HITS:1 COG:ECs4707 KEGG:ns NR:ns ## COG: ECs4707 COG0583 # Protein_GI_number: 15833961 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 297 1 297 297 565 100.0 1e-161 MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLGQPLFVRDNRTVTLTEA GEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAAYSHLPPILDRFRAEHPSV EIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSMLENLAVVLIAPALPCPVRNQ VSVEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPMIYATVGGHEAMVSMVALGCGVA LLPEVVLENSPEPVRNRVMILDRSDEKTPFELGVCAQKKRLHEPLIEAFWRILPNHK >gi|299856432|gb|ADWV01000019.1| GENE 76 78388 - 79932 1608 514 aa, chain - ## HITS:1 COG:ECs4706 KEGG:ns NR:ns ## COG: ECs4706 COG1171 # Protein_GI_number: 15833960 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Escherichia coli O157:H7 # 1 514 1 514 514 1009 99.0 0 MADSQPLSGTPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHS FKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDA VRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHL DRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAE GVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSGALALAGMKKYI AQHNIRGERLAHILSGANVNFHGLRYVSERCELGEQREALLAVTIPEEKGSFLKFCQLLG GRSVTEFNYRFADAKNACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMAKLHVR YMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGTHWNISLFHYRSHGTDYGRVLAAFE LGDHEPDFETRLNELGYDCHDETNNPAFRFFLAG >gi|299856432|gb|ADWV01000019.1| GENE 77 79935 - 81785 2090 616 aa, chain - ## HITS:1 COG:ECs4705 KEGG:ns NR:ns ## COG: ECs4705 COG0129 # Protein_GI_number: 15833959 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Escherichia coli O157:H7 # 1 616 1 616 616 1206 99.0 0 MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVANSFTQFVPGHVHLRDLGKLV AEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCIS NCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGADPKVSDSQ SDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKQLFLNAGKRIV ELTKRYYEQNDESALPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIEFTMSD IDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPQT LEQYDVMLTQDDAVKNMFRAGPAGIRTTQAFSQDCRWDSLDDDRANGCIRSLEHAYSKDG GLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVAGDVVVIRY EGPKGGPGMQEMLYPTSFLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAASGGSIGL IEDGDMIAIDIPNRGIQLQVSDAELAARREAQEARGDKAWTPKNRERQVSFALRAYASLA TSADKGAVRDKSKLGG >gi|299856432|gb|ADWV01000019.1| GENE 78 81850 - 82779 1154 309 aa, chain - ## HITS:1 COG:ECs4704 KEGG:ns NR:ns ## COG: ECs4704 COG0115 # Protein_GI_number: 15833958 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 644 100.0 0 MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQR LHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDV IIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGY QEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQ VLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAFFGLFTGETEDK WGWLDQVNQ >gi|299856432|gb|ADWV01000019.1| GENE 79 82799 - 83062 254 87 aa, chain - ## HITS:1 COG:ECs4703 KEGG:ns NR:ns ## COG: ECs4703 COG3978 # Protein_GI_number: 15833957 # Func_class: S Function unknown # Function: Acetolactate synthase (isozyme II), small (regulatory) subunit # Organism: Escherichia coli O157:H7 # 1 87 1 87 87 143 100.0 8e-35 MMQHQVNVSARFNPETLERVLRVVRHRGFHVCSMNMAAASDAQNINIELTVASPRSVDLL FSQLNKLVDVAHVAICQSTTTSQQIRA >gi|299856432|gb|ADWV01000019.1| GENE 80 83059 - 84705 1435 548 aa, chain - ## HITS:1 COG:ECs4702 KEGG:ns NR:ns ## COG: ECs4702 COG0028 # Protein_GI_number: 15833956 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Escherichia coli O157:H7 # 1 548 1 548 548 1106 99.0 0 MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLCRHEQGAAMAAIGYARA TGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAPFIGTDAFQEVDVLGLSLA CTKHSFLVQSLEELPRIMAAAFDVASSGRPGPVLVDIPKDIQLASGDLEPWFTTVENEVT FPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALREFLATTKMPATCTLKGLGAVEAD YPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFAPHASVIHMDIDPAEM NKLRQAHVALQGDLNALLPALQQPLNINDWQQYCAQLRDEHTWRYDHPGDAIYAPLLLKQ LSDRKPADCVVTTDVGQHQMWAAQHIAHTRPENFITSSGLGTMGFGLPAAVGAQVARPND TVVCISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVRQWQQLFFQERYSETTLTD NPDFLMLASAFGIPGQHITRKDQVEAALDTMLNSDGPYLLHVSIDEFENVWPLVPPGASN SEMLEKLS >gi|299856432|gb|ADWV01000019.1| GENE 81 85295 - 86815 838 506 aa, chain + ## HITS:1 COG:yifB KEGG:ns NR:ns ## COG: yifB COG0606 # Protein_GI_number: 16131625 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Escherichia coli K12 # 1 506 11 516 516 980 99.0 0 MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEARDRVRSAIINSGYEY PAKKITINLAPADLPKEGGRYDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVP GAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHLRAVCAFLEGKHALERPKPTD AVSRALQHDLSDVVGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNE EALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFL DELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCT PEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKR QNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDII TRQHLQEAVSYRAIDRLLIHLQKLLT >gi|299856432|gb|ADWV01000019.1| GENE 82 86840 - 87178 451 112 aa, chain - ## HITS:1 COG:ECs4699 KEGG:ns NR:ns ## COG: ECs4699 COG3085 # Protein_GI_number: 15833953 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 112 1 112 112 208 100.0 2e-54 MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLF VAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD >gi|299856432|gb|ADWV01000019.1| GENE 83 87297 - 88136 599 279 aa, chain + ## HITS:1 COG:ECs4698 KEGG:ns NR:ns ## COG: ECs4698 COG0583 # Protein_GI_number: 15833952 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 279 1 279 279 536 100.0 1e-152 MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAA GEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTG LQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDL NYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLH TVVDSTTLSRPLYAIWLQNSDKNTLIRDLLKINVLDEVY Prediction of potential genes in microbial genomes Time: Sun May 15 15:41:53 2011 Seq name: gi|299856431|gb|ADWV01000020.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont19.1, whole genome shotgun sequence Length of sequence - 84675 bp Number of predicted genes - 74, with homology - 73 Number of transcription units - 47, operones - 18 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 197 - 243 4.2 1 1 Op 1 30/0.000 - CDS 362 - 787 521 ## COG0848 Biopolymer transport protein 2 1 Op 2 . - CDS 794 - 1513 835 ## COG0811 Biopolymer transport proteins - Prom 1734 - 1793 2.8 + Prom 1569 - 1628 5.0 3 2 Tu 1 . + CDS 1780 - 2967 1082 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases + Prom 2969 - 3028 3.9 4 3 Tu 1 . + CDS 3107 - 3766 649 ## COG0586 Uncharacterized membrane-associated protein + Term 3777 - 3814 7.2 5 4 Tu 1 . - CDS 3806 - 4705 894 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 4677 - 4736 5.3 6 5 Tu 1 . + CDS 4899 - 6062 1576 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family + Term 6123 - 6158 7.4 7 6 Tu 1 . + CDS 6167 - 6994 910 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 7008 - 7046 7.2 + Prom 7031 - 7090 2.9 8 7 Op 1 . + CDS 7194 - 8120 709 ## EC55989_3430 hypothetical protein 9 7 Op 2 . + CDS 8171 - 8428 322 ## COG4238 Murein lipoprotein + Term 8437 - 8476 9.2 - Term 8424 - 8464 5.1 10 8 Tu 1 . - CDS 8470 - 10689 2179 ## COG1032 Fe-S oxidoreductase - Prom 10718 - 10777 6.3 - Term 10752 - 10799 9.1 11 9 Op 1 7/0.077 - CDS 10800 - 12212 1321 ## COG2132 Putative multicopper oxidases - Term 12234 - 12268 2.8 12 9 Op 2 5/0.192 - CDS 12287 - 13024 600 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Prom 13103 - 13162 2.3 - Term 13084 - 13112 -0.9 13 10 Tu 1 . - CDS 13258 - 15516 2625 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 15565 - 15624 2.4 14 11 Tu 1 . - CDS 15654 - 15743 70 ## - Prom 15966 - 16025 4.8 - Term 15964 - 16021 4.3 15 12 Op 1 3/0.654 - CDS 16062 - 16544 445 ## COG3449 DNA gyrase inhibitor 16 12 Op 2 . - CDS 16597 - 16989 511 ## COG3111 Uncharacterized conserved protein - Prom 17061 - 17120 8.5 + Prom 17018 - 17077 4.6 17 13 Op 1 40/0.000 + CDS 17141 - 17800 805 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 18 13 Op 2 2/0.846 + CDS 17797 - 19146 1186 ## COG0642 Signal transduction histidine kinase + Term 19155 - 19198 7.2 19 14 Op 1 4/0.385 + CDS 19843 - 20424 693 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 20 14 Op 2 . + CDS 20455 - 20769 414 ## COG1359 Uncharacterized conserved protein + Term 20781 - 20817 4.2 21 15 Op 1 7/0.077 - CDS 20817 - 22709 1913 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 22 15 Op 2 7/0.077 - CDS 22738 - 23319 478 ## COG3150 Predicted esterase 23 15 Op 3 7/0.077 - CDS 23319 - 24146 761 ## COG1409 Predicted phosphohydrolases 24 15 Op 4 8/0.077 - CDS 24171 - 24593 142 ## COG3151 Uncharacterized protein conserved in bacteria 25 15 Op 5 . - CDS 24594 - 25223 542 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 25373 - 25432 4.7 + Prom 25254 - 25313 6.6 26 16 Tu 1 . + CDS 25428 - 26909 1656 ## COG1538 Outer membrane protein + Prom 26970 - 27029 2.5 27 17 Op 1 5/0.192 + CDS 27153 - 27728 412 ## COG5463 Predicted integral membrane protein 28 17 Op 2 . + CDS 27734 - 28894 1196 ## COG0754 Glutathionylspermidine synthase + Term 28902 - 28941 8.2 - Term 28887 - 28927 0.3 29 18 Tu 1 . - CDS 28932 - 29720 841 ## COG3384 Uncharacterized conserved protein - Prom 29811 - 29870 5.5 + Prom 29707 - 29766 3.5 30 19 Tu 1 . + CDS 29863 - 30636 954 ## COG0428 Predicted divalent heavy-metal cations transporter + Term 30746 - 30777 -0.8 - Term 30634 - 30676 10.4 31 20 Tu 1 . - CDS 30694 - 30864 231 ## ECUMN_3528 hypothetical protein - Prom 30956 - 31015 5.0 - Term 31053 - 31094 5.6 32 21 Tu 1 . - CDS 31125 - 31778 771 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase + Prom 32065 - 32124 3.7 33 22 Tu 1 . + CDS 32152 - 32442 328 ## COG2960 Uncharacterized protein conserved in bacteria + Term 32458 - 32509 9.1 + Prom 32564 - 32623 8.8 34 23 Op 1 6/0.115 + CDS 32725 - 33276 514 ## COG3539 P pilus assembly protein, pilin FimA 35 23 Op 2 10/0.077 + CDS 33336 - 35840 1227 ## COG3188 P pilus assembly protein, porin PapC 36 23 Op 3 . + CDS 35856 - 36605 453 ## COG3121 P pilus assembly protein, chaperone PapD 37 23 Op 4 . + CDS 36607 - 37671 298 ## SSON_3184 hypothetical protein + Term 37693 - 37720 1.5 - Term 37675 - 37713 3.5 38 24 Tu 1 . - CDS 37714 - 37914 194 ## SSON_3186 glycogen synthesis protein GlgS - Prom 38008 - 38067 6.9 + Prom 37999 - 38058 5.8 39 25 Op 1 . + CDS 38183 - 38812 269 ## ECO103_3727 putative inner membrane protein 40 25 Op 2 . + CDS 38839 - 40500 1758 ## COG2268 Uncharacterized protein conserved in bacteria + Term 40517 - 40553 3.0 - Term 41064 - 41095 3.2 41 26 Op 1 5/0.192 - CDS 41294 - 42727 1901 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 42 26 Op 2 5/0.192 - CDS 42775 - 45615 2909 ## COG1391 Glutamine synthetase adenylyltransferase 43 26 Op 3 . - CDS 45638 - 46939 1521 ## COG3025 Uncharacterized conserved protein - Prom 47011 - 47070 2.6 + Prom 47095 - 47154 2.2 44 27 Op 1 7/0.077 + CDS 47181 - 47801 669 ## COG3103 SH3 domain protein 45 27 Op 2 . + CDS 47865 - 49103 1076 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Term 49184 - 49235 2.8 46 28 Op 1 4/0.385 - CDS 49266 - 50087 1006 ## COG1968 Uncharacterized bacitracin resistance protein 47 28 Op 2 . - CDS 50178 - 50546 434 ## COG1539 Dihydroneopterin aldolase + Prom 50488 - 50547 1.8 48 29 Tu 1 . + CDS 50651 - 51268 527 ## COG0344 Predicted membrane protein 49 30 Tu 1 . - CDS 51281 - 52213 869 ## COG0583 Transcriptional regulator - Prom 52339 - 52398 3.9 + Prom 52280 - 52339 3.5 50 31 Op 1 11/0.000 + CDS 52423 - 53331 262 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 51 31 Op 2 3/0.654 + CDS 53304 - 53933 249 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase + Term 53941 - 53973 1.5 52 31 Op 3 . + CDS 53982 - 55445 1478 ## COG0471 Di- and tricarboxylate transporters + Term 55453 - 55495 4.0 - Term 55438 - 55480 2.8 53 32 Tu 1 . - CDS 55488 - 56501 656 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase - Prom 56525 - 56584 4.0 + Prom 56544 - 56603 6.3 54 33 Tu 1 . + CDS 56738 - 56953 357 ## PROTEIN SUPPORTED gi|15803607|ref|NP_289640.1| 30S ribosomal protein S21 + Term 57000 - 57040 6.1 + Prom 56982 - 57041 3.0 55 34 Op 1 31/0.000 + CDS 57064 - 58809 1451 ## COG0358 DNA primase (bacterial type) 56 34 Op 2 . + CDS 59004 - 60845 2446 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 60901 - 60933 3.0 - Term 60889 - 60919 2.6 57 35 Tu 1 . - CDS 60923 - 61429 417 ## COG3663 G:T/U mismatch-specific DNA glycosylase - Prom 61571 - 61630 79.6 + TRNA 61554 - 61629 93.9 # Met CAT 0 0 - Term 61629 - 61662 5.4 58 36 Tu 1 . - CDS 61683 - 62447 764 ## COG2375 Siderophore-interacting protein - Prom 62491 - 62550 6.2 + Prom 62437 - 62496 6.7 59 37 Tu 1 . + CDS 62724 - 63347 745 ## COG1695 Predicted transcriptional regulators + Term 63436 - 63479 3.2 60 38 Tu 1 . - CDS 63501 - 65021 1560 ## COG0840 Methyl-accepting chemotaxis protein 61 39 Tu 1 . + CDS 65529 - 66818 1352 ## COG4992 Ornithine/acetylornithine aminotransferase + Term 66826 - 66867 9.1 - Term 66814 - 66854 8.1 62 40 Tu 1 . - CDS 66860 - 67192 479 ## COG0073 EMAP domain - Prom 67213 - 67272 3.1 + Prom 67163 - 67222 4.8 63 41 Tu 1 . + CDS 67411 - 68394 1055 ## COG1609 Transcriptional regulators + Term 68404 - 68453 12.3 + Prom 68399 - 68458 3.9 64 42 Op 1 . + CDS 68578 - 71670 3130 ## COG3250 Beta-galactosidase/beta-glucuronidase 65 42 Op 2 3/0.654 + CDS 71667 - 72116 423 ## COG2731 Beta-galactosidase, beta subunit 66 42 Op 3 . + CDS 72179 - 73612 1429 ## COG0531 Amino acid transporters + Term 73632 - 73692 9.3 + Prom 73649 - 73708 6.7 67 43 Op 1 . + CDS 73746 - 74816 1054 ## B21_02898 hypothetical protein 68 43 Op 2 . + CDS 74833 - 77184 2745 ## JW3051 predicted glycosyl hydrolase + Prom 77410 - 77469 7.2 69 44 Tu 1 . + CDS 77510 - 79528 1710 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 70 45 Tu 1 . - CDS 79646 - 80782 448 ## PROTEIN SUPPORTED gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative - Prom 80827 - 80886 4.6 + Prom 80752 - 80811 2.0 71 46 Op 1 3/0.654 + CDS 80867 - 81370 465 ## COG1451 Predicted metal-dependent hydrolase 72 46 Op 2 3/0.654 + CDS 81447 - 82130 474 ## COG2949 Uncharacterized membrane protein 73 46 Op 3 3/0.654 + CDS 82191 - 83195 808 ## COG0673 Predicted dehydrogenases and related proteins + Term 83221 - 83273 6.6 + Prom 83210 - 83269 6.7 74 47 Tu 1 . + CDS 83478 - 84443 1268 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance Predicted protein(s) >gi|299856431|gb|ADWV01000020.1| GENE 1 362 - 787 521 141 aa, chain - ## HITS:1 COG:ECs3889 KEGG:ns NR:ns ## COG: ECs3889 COG0848 # Protein_GI_number: 15833143 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Escherichia coli O157:H7 # 1 141 1 141 141 252 100.0 2e-67 MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVDVKVNLPASTSTPQPRP EKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMD TLHQAGYLKIGLVGEETAKAK >gi|299856431|gb|ADWV01000020.1| GENE 2 794 - 1513 835 239 aa, chain - ## HITS:1 COG:ECs3890 KEGG:ns NR:ns ## COG: ECs3890 COG0811 # Protein_GI_number: 15833144 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Escherichia coli O157:H7 # 1 239 6 244 244 441 100.0 1e-124 MQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEA RSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQ MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGL VAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEASAAAHPVRVAQKLRAG >gi|299856431|gb|ADWV01000020.1| GENE 3 1780 - 2967 1082 395 aa, chain + ## HITS:1 COG:metC KEGG:ns NR:ns ## COG: metC COG0626 # Protein_GI_number: 16130906 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Escherichia coli K12 # 1 395 1 395 395 813 99.0 0 MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRG TLTHFSLQQAMCELEGGAGCALFPCGAAAVANSILAFVEQGVHVLMTNTAYEPSQDFCSK ILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDA IIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLM GQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFW KRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRP QGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARIV >gi|299856431|gb|ADWV01000020.1| GENE 4 3107 - 3766 649 219 aa, chain + ## HITS:1 COG:ECs3893 KEGG:ns NR:ns ## COG: ECs3893 COG0586 # Protein_GI_number: 15833147 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 381 99.0 1e-106 MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLPASFLPGDSLLILAGAL IAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGWLAQLPAKYHQRATCMFDR HGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLSGLLWVSVVISFGYALSMIPF VKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCNA >gi|299856431|gb|ADWV01000020.1| GENE 5 3806 - 4705 894 299 aa, chain - ## HITS:1 COG:yqhC KEGG:ns NR:ns ## COG: yqhC COG2207 # Protein_GI_number: 16130908 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 299 77 375 375 597 99.0 1e-171 MKREEICRLLADKVNKLKNKENSLSELLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN >gi|299856431|gb|ADWV01000020.1| GENE 6 4899 - 6062 1576 387 aa, chain + ## HITS:1 COG:yqhD KEGG:ns NR:ns ## COG: yqhD COG1979 # Protein_GI_number: 16130909 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Escherichia coli K12 # 1 387 1 387 387 780 99.0 0 MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKTGVLDQVLDALKGMDVL EFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHIL QTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDKQAFHSAHVQPVFAVLDPVYT YTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIQDRFAEGILLTLIEDGPKALKEPENYDV RANVMWAATQALNGLIGAGVPQDWATHMLGHELTAMHGLDHAQTLAIVLPALWNEKRETK RAKLLQYAERVWNITEGSDDERIDAAIAATRNFFEQLGVPTHLSDYGLDGSSIPALLKKL EEHGMTQLGENHDITLDVSRRIYEAAR >gi|299856431|gb|ADWV01000020.1| GENE 7 6167 - 6994 910 275 aa, chain + ## HITS:1 COG:STM3165 KEGG:ns NR:ns ## COG: STM3165 COG0656 # Protein_GI_number: 16766465 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Salmonella typhimurium LT2 # 1 275 1 275 275 497 92.0 1e-141 MANPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKA LKNASVNREELFITTKLWNDDHKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAW KGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHK IQTESWSPLAQGGKGVFDQKVIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAE NFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG >gi|299856431|gb|ADWV01000020.1| GENE 8 7194 - 8120 709 308 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3430 NR:ns ## KEGG: EC55989_3430 # Name: yqhG # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 308 1 308 308 609 100.0 1e-173 MKIILLFLAALASFTVHAQPPSLTVEQTVRHIYQNYKSDATAPYFGETGERAITSARIQQ ALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTDADHADAVVRFRIFKDDKE KTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLAALASLQKEQPEAFVAELFEH IADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDMQIERQFIYDNPICFGEESLFSR VDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQRREGKWEIADFIRPNSGSLLKQIEA KTAARLKQ >gi|299856431|gb|ADWV01000020.1| GENE 9 8171 - 8428 322 85 aa, chain + ## HITS:1 COG:yqhH KEGG:ns NR:ns ## COG: yqhH COG4238 # Protein_GI_number: 16130912 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein lipoprotein # Organism: Escherichia coli K12 # 1 85 1 85 85 149 100.0 2e-36 MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSE ANRANTRLDAQDYFDCLRCLRMYAE >gi|299856431|gb|ADWV01000020.1| GENE 10 8470 - 10689 2179 739 aa, chain - ## HITS:1 COG:ECs3900 KEGG:ns NR:ns ## COG: ECs3900 COG1032 # Protein_GI_number: 15833154 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli O157:H7 # 1 739 1 739 739 1516 99.0 0 MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPS FGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRR LRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVR RSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDST RLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKV KGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRV PHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR ARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY PSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE AMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASST QSRPVNAGAKKRPKAAVGR >gi|299856431|gb|ADWV01000020.1| GENE 11 10800 - 12212 1321 470 aa, chain - ## HITS:1 COG:ECs3901 KEGG:ns NR:ns ## COG: ECs3901 COG2132 # Protein_GI_number: 15833155 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Escherichia coli O157:H7 # 1 470 1 470 470 930 100.0 0 MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRRGQPLFMTVQRAHWSFT PGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPARMM SPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVD DFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQSPYVEVSRGWVRLRLLNASNSR RYQLQMSDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAAS IVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDISLGD DPGINGQLWDVNRIDVTAQQGTWERWTVRADEPQAFHIEGVMFQIRNVNGAMPFPEDRGW KDTVWVDGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP >gi|299856431|gb|ADWV01000020.1| GENE 12 12287 - 13024 600 245 aa, chain - ## HITS:1 COG:ECs3902 KEGG:ns NR:ns ## COG: ECs3902 COG0204 # Protein_GI_number: 15833156 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 515 100.0 1e-146 MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPAD AESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNN RTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVS TTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAERE AAGKV >gi|299856431|gb|ADWV01000020.1| GENE 13 13258 - 15516 2625 752 aa, chain - ## HITS:1 COG:ECs3903 KEGG:ns NR:ns ## COG: ECs3903 COG0188 # Protein_GI_number: 15833157 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Escherichia coli O157:H7 # 1 752 1 752 752 1461 99.0 0 MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNASAKF KKSARTVGDVLGKYHPHGDIACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRY TESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDI PPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVR MRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIV PRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRR RLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILEL KLRHLAKLEEMKIRGEQSELEKERDQLQGILASERKMNNLLKKELQADAQAYGDDRRSPL QEREEAKAMSEHDMLPSEPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSN QPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDA GYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDL PQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGE RGRRGTLMRGLQRIDRVEIDSPRRASSGDSEE >gi|299856431|gb|ADWV01000020.1| GENE 14 15654 - 15743 70 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPSGVAWAQPCAALYADQVYSKELYIKAH >gi|299856431|gb|ADWV01000020.1| GENE 15 16062 - 16544 445 160 aa, chain - ## HITS:1 COG:ECs3905 KEGG:ns NR:ns ## COG: ECs3905 COG3449 # Protein_GI_number: 15833159 # Func_class: L Replication, recombination and repair # Function: DNA gyrase inhibitor # Organism: Escherichia coli O157:H7 # 1 160 1 160 160 332 98.0 3e-91 MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWD DPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTIWGIIR HWLPASGEKMRKAPILFHYTNLAEGVTEQRLETDVYVPLA >gi|299856431|gb|ADWV01000020.1| GENE 16 16597 - 16989 511 130 aa, chain - ## HITS:1 COG:ECs3906 KEGG:ns NR:ns ## COG: ECs3906 COG3111 # Protein_GI_number: 15833160 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 130 1 130 130 243 100.0 5e-65 MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNGSVTTVESAKSLRDDTW VTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPKDTVEIQGEVDKDWNSVEI DVKQIRKVNP >gi|299856431|gb|ADWV01000020.1| GENE 17 17141 - 17800 805 219 aa, chain + ## HITS:1 COG:ECs3907 KEGG:ns NR:ns ## COG: ECs3907 COG0745 # Protein_GI_number: 15833161 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 423 100.0 1e-118 MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGR DILREWREKGQREPVLILTARDALEERVEGLRLGADDYLCKPFALIEVAARLEALMRRTN GQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLELLMRNAGRVLPRKLIEEKLYT WDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGEK >gi|299856431|gb|ADWV01000020.1| GENE 18 17797 - 19146 1186 449 aa, chain + ## HITS:1 COG:ZygiY KEGG:ns NR:ns ## COG: ZygiY COG0642 # Protein_GI_number: 15803568 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 449 1 449 449 850 98.0 0 MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELFDTQLMLFAKRLSTLDL NEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLNDGDNGEDIPYSYQREGFADG QLVGDKDQWRFVWMTSPDGKYRIVVGQEWEYREDMALAIVAGQLIPWLVALPIMLIIMMV LLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRF TSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKALLQLHYGIDRATRLVDQLLTLSRLD SLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAHGIKRTGQPLLLSLLVRNL LDNAVRYSPQGSVIDVTLNADNFIVRDNGPGVTPEALARIGERFYRPPGQTATGSGLGLS IVQRIAKLHGMNVEFGNAEQGGFEAKVSW >gi|299856431|gb|ADWV01000020.1| GENE 19 19843 - 20424 693 193 aa, chain + ## HITS:1 COG:ECs3910 KEGG:ns NR:ns ## COG: ECs3910 COG2249 # Protein_GI_number: 15833164 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 400 100.0 1e-112 MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWA DVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYM LSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKMPDVPRY TEEYRKHLVEIFG >gi|299856431|gb|ADWV01000020.1| GENE 20 20455 - 20769 414 104 aa, chain + ## HITS:1 COG:ECs3911 KEGG:ns NR:ns ## COG: ECs3911 COG1359 # Protein_GI_number: 15833165 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 104 1 104 104 199 100.0 9e-52 MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAAGVSFQSMAPDSI VMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQPGI >gi|299856431|gb|ADWV01000020.1| GENE 21 20817 - 22709 1913 630 aa, chain - ## HITS:1 COG:parE KEGG:ns NR:ns ## COG: parE COG0187 # Protein_GI_number: 16130926 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Escherichia coli K12 # 1 630 1 630 630 1299 99.0 0 MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHAKRVDVILH ADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVN ALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPDETFFDSPRFS VSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDGLNDYLAEAVNGLPTLPEKPFIG NFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNI LPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFILWLNQ NVQAAELLAEMAISSAQRRMRAAKKVVRKKLTSGPALPGKLADCTAQDLNRTELFLVEGD SAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLAAQEVHDISVAIGIDPDSDDLSQL RYGKICILADADSDGLHIATLLCALFVKHFRALVKHGHVYVALPPLYRIDLGKEVYYALT EEEKEGVLEQLKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTD AMMDMLLAKKRSEDRRNWLQEKGDMAEIEV >gi|299856431|gb|ADWV01000020.1| GENE 22 22738 - 23319 478 193 aa, chain - ## HITS:1 COG:ECs3919 KEGG:ns NR:ns ## COG: ECs3919 COG3150 # Protein_GI_number: 15833173 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 390 100.0 1e-109 MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYPSDAAELLESIVLEHGG DSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESR HIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYASCRQTVIEGGNHAFTGFEDY FNPIVDFLGLHHL >gi|299856431|gb|ADWV01000020.1| GENE 23 23319 - 24146 761 275 aa, chain - ## HITS:1 COG:ECs3920 KEGG:ns NR:ns ## COG: ECs3920 COG1409 # Protein_GI_number: 15833174 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Escherichia coli O157:H7 # 1 275 1 275 275 528 100.0 1e-150 MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQAVLEAIRPHQHEFDLIV ATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMYSALQDAGISPAKRVFIGE QWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTLLLLHHHPLPAGCSWLDQHSL RNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLLATPSTCVQFKPHCSNFTLDTIA PGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY >gi|299856431|gb|ADWV01000020.1| GENE 24 24171 - 24593 142 140 aa, chain - ## HITS:1 COG:ECs3921 KEGG:ns NR:ns ## COG: ECs3921 COG3151 # Protein_GI_number: 15833175 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 140 1 140 140 274 100.0 4e-74 MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVT IEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQ FLADWLRYCLAHGAMAIPVY >gi|299856431|gb|ADWV01000020.1| GENE 25 24594 - 25223 542 209 aa, chain - ## HITS:1 COG:ECs3922 KEGG:ns NR:ns ## COG: ECs3922 COG0494 # Protein_GI_number: 15833176 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Escherichia coli O157:H7 # 1 209 1 209 209 405 100.0 1e-113 MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAA VLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLI VKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWV EEGKIDNAASVIALQWLQLHHQALKNEWA >gi|299856431|gb|ADWV01000020.1| GENE 26 25428 - 26909 1656 493 aa, chain + ## HITS:1 COG:tolC KEGG:ns NR:ns ## COG: tolC COG1538 # Protein_GI_number: 16130931 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli K12 # 1 493 3 495 495 801 100.0 0 MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPL LPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTY QTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNAR AQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNALLKEAEK RNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSN MGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASI SSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQL NIKSALGTLNEQDLLALNNALSKPVSTNPENVAPQTPEQNAIADGYAPDSPAPVVQQTSA RTTTSNGHNPFRN >gi|299856431|gb|ADWV01000020.1| GENE 27 27153 - 27728 412 191 aa, chain + ## HITS:1 COG:ygiB KEGG:ns NR:ns ## COG: ygiB COG5463 # Protein_GI_number: 16130933 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 191 44 234 234 301 100.0 4e-82 MLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEF GEGQCQQAPAQAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNP ASPAYGKYTDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRS ATGTSSRSMGG >gi|299856431|gb|ADWV01000020.1| GENE 28 27734 - 28894 1196 386 aa, chain + ## HITS:1 COG:ECs3926 KEGG:ns NR:ns ## COG: ECs3926 COG0754 # Protein_GI_number: 15833180 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Escherichia coli O157:H7 # 1 386 1 386 386 791 100.0 0 MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCL KVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADT PTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLIDRFVELREQYGFQLLHLTCCR DTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQFTDLQDQVISNLFKLYPWEFML REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYV VKPIFSREGANVSIIENGKTIEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQP AGIGIREDRALITQDMSRFYPHIFVE >gi|299856431|gb|ADWV01000020.1| GENE 29 28932 - 29720 841 262 aa, chain - ## HITS:1 COG:ECs3927 KEGG:ns NR:ns ## COG: ECs3927 COG3384 # Protein_GI_number: 15833181 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 262 10 271 271 503 98.0 1e-142 MSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMTLPRPQAIVVVSAHWFTRGTGVTAME TPPTIHDFGGFPQALYDTHYPAPGSPVLAQHLVELLAPVPVTLDKEAWGFDHGSWGVLIK MYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIMLVASGNVVHNLRTVKWHGDSS PYPWAMSFNEYVKANLTWQGAVEQHPLVNYLDHEGGALSNPTPEHYLPLLYVLGAWDGQE PITIPVDGIEMGSLSMLSVQIG >gi|299856431|gb|ADWV01000020.1| GENE 30 29863 - 30636 954 257 aa, chain + ## HITS:1 COG:ECs3928 KEGG:ns NR:ns ## COG: ECs3928 COG0428 # Protein_GI_number: 15833182 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Escherichia coli O157:H7 # 1 257 1 257 257 392 100.0 1e-109 MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALAAE GMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLPKSIKRTAILLTLGISLHN FPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPVYAATGSKRTAILWAGISGLA EILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCG MSVMGFSLVLLQTAGIG >gi|299856431|gb|ADWV01000020.1| GENE 31 30694 - 30864 231 56 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_3528 NR:ns ## KEGG: ECUMN_3528 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 56 9 64 64 102 100.0 5e-21 MFIAWYWIVLIALVVVGYFLHLKRYCRAFRQDRDALLEARNKYLNSTREETAEKVE >gi|299856431|gb|ADWV01000020.1| GENE 32 31125 - 31778 771 217 aa, chain - ## HITS:1 COG:ECs3929 KEGG:ns NR:ns ## COG: ECs3929 COG0108 # Protein_GI_number: 15833183 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 217 1 217 217 412 100.0 1e-115 MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIR HGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRA AIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDG TMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS >gi|299856431|gb|ADWV01000020.1| GENE 33 32152 - 32442 328 96 aa, chain + ## HITS:1 COG:yqiC KEGG:ns NR:ns ## COG: yqiC COG2960 # Protein_GI_number: 16130938 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 96 21 116 116 134 98.0 4e-32 MIDPKKIEQIARQVHESMPKGIREFGEDVEKKIRQTLQAQLTRLDLVSREEFDVQTQVLL RTREKLALLEQRMSELENRSTEIKKQPDPETLPPTL >gi|299856431|gb|ADWV01000020.1| GENE 34 32725 - 33276 514 183 aa, chain + ## HITS:1 COG:ygiL KEGG:ns NR:ns ## COG: ygiL COG3539 # Protein_GI_number: 16130939 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 183 1 183 183 337 99.0 7e-93 MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADT VLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTANTMTGQTDLLKNTKETEIGGA TGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMESPSKDATPGNVYAQADYKI AYE >gi|299856431|gb|ADWV01000020.1| GENE 35 33336 - 35840 1227 834 aa, chain + ## HITS:1 COG:yqiG KEGG:ns NR:ns ## COG: yqiG COG3188 # Protein_GI_number: 16130942 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 23 834 10 821 821 1555 97.0 0 MYKKLKLTTISELIKNIYCSLSVLIIGCASAYAVEFNKDLIEAEDRENVNLSQFETDGQL PVGKYSLNALINNKRTPIHLDLQWVLIDNQTAVCLTPEQLTLLGFTDEIIEVAQQNLIDG CYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPPELWDHGIAGAFLDYNLYASH YAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFNNGKSQANNLDFPRIYLFRPIPA INAKLTIGQYDTESSIFDSFHFSGVSLKSDENMLPPDLRGYAPQITGVAQTNAKVTVSQN NRIIYQENVPPGPFAITNLFNTLQGQLDVKVEEEDGQVTQWQVASNSIPYLTRKGQIRYT TAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNVSLYGGSVLTNRDYQSLAAGVGFNLNSLG SLSFDVTRSDAQLHNQDKETGYSYRANYSKRFESTGSQLTFAGYRFSDKNFVTMNEYIND TNHYTNYQNEKESYIVTFNQYLESLRLNTYVSLARNTYWDASSNVNYSLSLSRDFDIGPL KNVSTSLTFSRINWEEDNQDQLYLNISIPWGTSRTLSYGMQRNQDNKISHTASWYDSSDR NNSWSVSASGDNDEFKDMKASLRASYQHNTENGRLYLSGTSQRDSYYSLNASWNGSFTAT RHGAAFHDYSGSADSRFMIDADGAEDIPLNNKRAVTNRYGIGVIPSVSSYITTSLSVDTR NLPENVDIENSVITTTLTEGAIGYAKLDTRKGYQIMGVIRLADGSHPPLGISVKDKTSHK ELGLVADGGFVYLNGIQDDSKLTLRWGDKSCFIQPPNSSNLTTGTVILPCISQN >gi|299856431|gb|ADWV01000020.1| GENE 36 35856 - 36605 453 249 aa, chain + ## HITS:1 COG:yqiH KEGG:ns NR:ns ## COG: yqiH COG3121 # Protein_GI_number: 16130943 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 249 4 252 252 480 93.0 1e-135 MRYLNTKNLIAAGVLLACMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQT WIEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMISQEKIAQLPNDRETLFYFNVREIPPK TDKKNVMQVTMQHALKLFWRPKAIELEDDGVMSYEKVEIIRRNDGSIRFNNKMPYHVTLG YIGTNGITMLPQTQSLMVTPYSHADTQFKNVPSAFQVGYINDFGGLSFYEINCPTVNNSC NVSVAKRDK >gi|299856431|gb|ADWV01000020.1| GENE 37 36607 - 37671 298 354 aa, chain + ## HITS:1 COG:no KEGG:SSON_3184 NR:ns ## KEGG: SSON_3184 # Name: yqiI # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 354 1 354 354 689 100.0 0 MRYLLIVIIFIIGFSALPVWAMDCYAEHEGGNTVVIGYVPRISIPSNGKKGDKIWQSSEY FMNVFCNNALPAPSPGEEYPSAWTNIMMFLPGGQDFYNQNSYIFGVTYNGVDYDSTAPNA IAAPECIDIKGAGTFNNHYKNPAVCSGGPEPQLSVTFPARVQLYIKLAKNANRVNKNLVL PDEYIALEFKGMSGAGAIEVDKNLTFRIRGLNNIHVLDCFVNVALEPADGVVDFGKINSR TIKNTSVSETFSVVMTKDPGAACTEQFNILGSFFTTDILSDYSHLDMGNGLLLKIFHKDG TATEFNRFSQFASFSSSSAPSVTAPFRAELSANPAETVVEGPFSKDVILKITYN >gi|299856431|gb|ADWV01000020.1| GENE 38 37714 - 37914 194 66 aa, chain - ## HITS:1 COG:no KEGG:SSON_3186 NR:ns ## KEGG: SSON_3186 # Name: glgS # Def: glycogen synthesis protein GlgS # Organism: S.sonnei # Pathway: not_defined # 1 66 1 66 66 126 100.0 2e-28 MDHSLNSLNNFDFLARSFARMHAEGRPVDILAVTGNMDEEHRTWFCARYAWYCQQMMQAR ELELEH >gi|299856431|gb|ADWV01000020.1| GENE 39 38183 - 38812 269 209 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3727 NR:ns ## KEGG: ECO103_3727 # Name: yqiJ # Def: putative inner membrane protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 209 1 209 209 409 100.0 1e-113 MILFADYNTPYLFAISFVLLIGLLEILALICGHMLSGALDAHLDHYDSITTGHISQALHY LNIGRLPALVVLCLLAGFFGLIGILLQHACIMVWQSPLSNLFVVPVSLLFTIIAVHYTGK IVAPWIPRDHSSAITEEEYIGSMALITGHQATSGNPCEGKLTDQFGQIHYLLLEPEEGKF FTKGDKVLIICRLSATRYLAENNPWPQIL >gi|299856431|gb|ADWV01000020.1| GENE 40 38839 - 40500 1758 553 aa, chain + ## HITS:1 COG:ECs3933 KEGG:ns NR:ns ## COG: ECs3933 COG2268 # Protein_GI_number: 15833187 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 553 1 553 553 807 98.0 0 MDDIVNSVPSWMFTAIIAVYILFIIGIIFARLYRRASAEQAFVRTGLGGQKVVMSGGAIV MPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKPSVEGIATAAQTLG QRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAEDLSKNGLELE SVSLTNFNQTSKEHFNPNNAFDAEGLTKLTQETERRRRERNEVEQDVEVAVREKNRDALS RKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEAERRREAEQTRILAERQIQETEIER EQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQSQAEARANLALAEAVS AQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAEKEAAEMQAAAIVELAEA TRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPAVIEKSVEPMKSIDGIKIIQ VDGLNRGSAAGDANTGNVGGGNLAEQALSAALSYRTQAPLIDSLLNEIGVSGGSLAALTS PLTSTTPVAENVE >gi|299856431|gb|ADWV01000020.1| GENE 41 41294 - 42727 1901 477 aa, chain - ## HITS:1 COG:rfaE KEGG:ns NR:ns ## COG: rfaE COG2870 # Protein_GI_number: 16130948 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Escherichia coli K12 # 1 477 1 477 477 916 100.0 0 MKVTLPEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVNTIEERPGGAANVAMNI ASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLD FEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASVQQMIQLARKAGVPVLIDPKG TDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMKLIADYELSALLVTRSEQGMSLL QPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAAGNSLEEACFFANAAAGVVVGKLGT STVSPIELENAVRGRADTGFGVMTEEELKLAVAAARKRGEKVVMTNGVFDILHAGHVSYL ANARKLGDRLIVAVNSDASTKRLKGDSRPVNPLEQRMIVLGALEAVDWVVSFEEDTPQRL IAGILPDLLVKGGDYKPEEIAGSKEVWANGGEVLVLNFEDGCSTTNIIKKIQQDKKG >gi|299856431|gb|ADWV01000020.1| GENE 42 42775 - 45615 2909 946 aa, chain - ## HITS:1 COG:glnE KEGG:ns NR:ns ## COG: glnE COG1391 # Protein_GI_number: 16130949 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Escherichia coli K12 # 1 946 1 946 946 1805 99.0 0 MKPLSSPLQQYWQTVVERLPEPLAEKSLSAQAKSVLTFSDFVQDSVIAHPEWLTELESQS PQADEWQHYAAWLQEALSNVSDEAGLMRELRLFRRRIMVRIAWAQTLALVTEESILQQLS HLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGMGKLGGGELNFSSDIDLIFAW PEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGFVYRVDMRLRPFGESGPLVLSFA ALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELRAMLRPFVFRRYIDFSVIQSLRNMK GMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQLIRGGREPSLQSRSLLPTLSVIAALH LLSENDAEQLRVAYLFLRRLENLLQSINDEQTQTLPSDELNRARLAWAMDFADWPQLTGA LTAHMTNVRRVFNELIGDDESETQEESLSEQWRELWQDALQEDDTTPVLAHLSEDDRKQV LTLIADFRKELDKRTIGPRGRQVLDHLMPHLLSDVCAREDAAVTLSRITALLVGIVTRTT YLELLSEFPAALKHLISLCAASPMIASQLARYPLLLDELLDPNTLYQPTATDAYRDELRQ YLLRVPEDDEEQQLEALRQFKQAQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQ AWVQMVARYGKPNHLNDREGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGER EIDGRQFYLRLAQRIMHLFSTRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAW TWEHQALVRARVVYGDPQLTAHFDAVRREIMTLPREGKTLQTEVREMREKMRAHLGNKHR DRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMAL TRAYTTLRDELHHLALQELPGHVPEDCFTAERELVRASWQKWLVEE >gi|299856431|gb|ADWV01000020.1| GENE 43 45638 - 46939 1521 433 aa, chain - ## HITS:1 COG:ECs3937 KEGG:ns NR:ns ## COG: ECs3937 COG3025 # Protein_GI_number: 15833191 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 433 1 433 433 832 98.0 0 MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGE NGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLF STDFYREKWLVAVDDSRIEIALDQGEVKAGEFAEPICELELELLSGDTRAVLKLANQLVS QTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHE ELWVRGNDAAKEQVLAAIGLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTA VYSTKTAMAKLALTEWLVSKAWQPFLDAKAQSKMSDSFKRFADIHLSRHAAELKSVFCQP LGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQAWLENWQGLRHAIATGQRIEIEHFRNEA NNQEPFWLHSGKR >gi|299856431|gb|ADWV01000020.1| GENE 44 47181 - 47801 669 206 aa, chain + ## HITS:1 COG:ECs3938 KEGG:ns NR:ns ## COG: ECs3938 COG3103 # Protein_GI_number: 15833192 # Func_class: T Signal transduction mechanisms # Function: SH3 domain protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 347 99.0 8e-96 MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHYRLVGTVNAGEEVTLLQ TDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQVKTLTDKLTNIDNTWNQRT AEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASVQLDDKQRTIIMQWFMYGGGV LGLGLLLGLVLPHLIPTRKRKDRWMN >gi|299856431|gb|ADWV01000020.1| GENE 45 47865 - 49103 1076 412 aa, chain + ## HITS:1 COG:cca KEGG:ns NR:ns ## COG: cca COG0617 # Protein_GI_number: 16130952 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Escherichia coli K12 # 1 412 1 412 412 833 99.0 0 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLTLMREMTHAGELEHLTPERVWKE TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPARWHPEIDTGIHTLMTLSMAA MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPKPD >gi|299856431|gb|ADWV01000020.1| GENE 46 49266 - 50087 1006 273 aa, chain - ## HITS:1 COG:ECs3940 KEGG:ns NR:ns ## COG: ECs3940 COG1968 # Protein_GI_number: 15833194 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Escherichia coli O157:H7 # 1 273 1 273 273 481 99.0 1e-136 MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDTAKTFEVVIQLGSILAV VVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPAVVLGLLFHDTIKSLFNPI NVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMIGCFQCLALWPGFSRSGATIS GGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGFLTTGDIPMFAVGFITAFVVALI AIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF >gi|299856431|gb|ADWV01000020.1| GENE 47 50178 - 50546 434 122 aa, chain - ## HITS:1 COG:folB KEGG:ns NR:ns ## COG: folB COG1539 # Protein_GI_number: 16130954 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Escherichia coli K12 # 1 122 2 123 123 222 100.0 1e-58 MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETV VSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAVARAANVGVIIERGNNLKE NN >gi|299856431|gb|ADWV01000020.1| GENE 48 50651 - 51268 527 205 aa, chain + ## HITS:1 COG:ECs3942 KEGG:ns NR:ns ## COG: ECs3942 COG0344 # Protein_GI_number: 15833196 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 388 100.0 1e-108 MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLI FDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGW DLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDN IQRLWRRQETKIWTKFKRKREKDPE >gi|299856431|gb|ADWV01000020.1| GENE 49 51281 - 52213 869 310 aa, chain - ## HITS:1 COG:ygiP KEGG:ns NR:ns ## COG: ygiP COG0583 # Protein_GI_number: 16130956 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 310 1 310 310 639 99.0 0 MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQILENTLATTLLNRSARGV ALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMR NYPELQVHFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYP QPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKG IMLRSEWDVLPFLESGKLVRVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWCQQRL GKPDEGYQVM >gi|299856431|gb|ADWV01000020.1| GENE 50 52423 - 53331 262 302 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 24 300 21 297 508 105 27 1e-45 MSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAETSSMGKIIYHTMFDNMQ KAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVEEATVKAPLRHNAVEIFDEV NTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPGRSKVLMPSEGYEGVVKFVFEN ISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPIGSRHPNPKAAELELRLEEGLNRL GIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTGCWAHRRGTLLVHADLTFENLSHTRS AL >gi|299856431|gb|ADWV01000020.1| GENE 51 53304 - 53933 249 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 1 199 305 504 508 100 30 1e-45 SVSHPERVMKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELKRPIPYDLN GKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKMVVGKGGMGPLTEEG CQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEFGPLIVSIDTHGN NLIAENKKLFAERRDPIVEEICEHVHYIK >gi|299856431|gb|ADWV01000020.1| GENE 52 53982 - 55445 1478 487 aa, chain + ## HITS:1 COG:ECs3946 KEGG:ns NR:ns ## COG: ECs3946 COG0471 # Protein_GI_number: 15833200 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Escherichia coli O157:H7 # 1 487 1 487 487 799 99.0 0 MKPSTEWWRYLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMV GISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTG LGRRIALFLVKKMGHRTLFLGYAVMFSELILAPVTPSNSARGAGIIYPIIRNLPPLYQSQ PNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLLIGLMKSASHATLSWGDWFLGML PLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETELQAMGPLCSREKRMLGLMVGALVLW IFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSNKAAWNVFFWLASLITLATGLNNTGFI SWFGKLLAGSLSGYSPTMVMVALIVVFYLLRYFFASATAYTSALAPMMIAAALAMPEIPL PVFCLMVGAAIGLGSILTPYATGPSPIYYGSGYLPTADYWRLGAIFGLIFLVLLVITGLL WMPVVLL >gi|299856431|gb|ADWV01000020.1| GENE 53 55488 - 56501 656 337 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 3 321 519 846 860 257 44 2e-67 MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQ AALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWNVPAIPVHHMEGHLLAPM LEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGG PLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDDQTRADIARAFE DAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLRAKLAEMMKKRRGEVFYARPEFCTD NGAMIAYAGMVRFKAGATADLGVSVRPRWPLAELPAA >gi|299856431|gb|ADWV01000020.1| GENE 54 56738 - 56953 357 71 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803607|ref|NP_289640.1| 30S ribosomal protein S21 [Escherichia coli O157:H7 EDL933] # 1 71 1 71 71 142 100 7e-33 MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKL ARENARRTRLY >gi|299856431|gb|ADWV01000020.1| GENE 55 57064 - 58809 1451 581 aa, chain + ## HITS:1 COG:ECs3949 KEGG:ns NR:ns ## COG: ECs3949 COG0358 # Protein_GI_number: 15833203 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Escherichia coli O157:H7 # 1 581 1 581 581 1191 100.0 0 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLP GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLN HMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK >gi|299856431|gb|ADWV01000020.1| GENE 56 59004 - 60845 2446 613 aa, chain + ## HITS:1 COG:ECs3950 KEGG:ns NR:ns ## COG: ECs3950 COG0568 # Protein_GI_number: 15833204 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Escherichia coli O157:H7 # 1 613 1 613 613 1033 100.0 0 MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP DADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA KRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDLAPTATH VGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGR SHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKK NFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQKLQQIEEETGLTIEQVKD INRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFE YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTP EELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESL RAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH PSRSEVLRSFLDD >gi|299856431|gb|ADWV01000020.1| GENE 57 60923 - 61429 417 168 aa, chain - ## HITS:1 COG:ygjF KEGG:ns NR:ns ## COG: ygjF COG3663 # Protein_GI_number: 16130964 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Escherichia coli K12 # 1 168 1 168 168 336 100.0 1e-92 MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQAGFTDRQLKPQEAQHLL DYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQALAILGKQAYEQGFSQRG AQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELDQALVVRGR >gi|299856431|gb|ADWV01000020.1| GENE 58 61683 - 62447 764 254 aa, chain - ## HITS:1 COG:ECs3952 KEGG:ns NR:ns ## COG: ECs3952 COG2375 # Protein_GI_number: 15833206 # Func_class: P Inorganic ion transport and metabolism # Function: Siderophore-interacting protein # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 517 100.0 1e-147 MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQ PDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQP GDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNA CQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY DPQRVRAAAYWHAK >gi|299856431|gb|ADWV01000020.1| GENE 59 62724 - 63347 745 207 aa, chain + ## HITS:1 COG:yqjI KEGG:ns NR:ns ## COG: yqjI COG1695 # Protein_GI_number: 16130966 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 207 1 207 207 351 100.0 5e-97 MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN QSDISDAQIKKIIAVIDRAAFDITQLD >gi|299856431|gb|ADWV01000020.1| GENE 60 63501 - 65021 1560 506 aa, chain - ## HITS:1 COG:Zaer_2 KEGG:ns NR:ns ## COG: Zaer_2 COG0840 # Protein_GI_number: 15803613 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli O157:H7 EDL933 # 125 506 1 382 382 671 99.0 0 MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFTLQELQGQPHNMVRHPD MPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATD EEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLPLRWRARGVMTLMFILLAAML WFVAAPVVTYFLCVLVVLLASACFEWQIVRPIENVARQALKVATGERNSVEHLNRSDELG LTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDELNEHTQQTVDNVQQTVATMN QMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKTMDDIADSTQRIGTITSLIND IAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKLIDASADKVQS GSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLSSLTRAVDELNLITQKNAEL VEESAQVSAMVKHRASRLEDAVTVLH >gi|299856431|gb|ADWV01000020.1| GENE 61 65529 - 66818 1352 429 aa, chain + ## HITS:1 COG:ECs3955 KEGG:ns NR:ns ## COG: ECs3955 COG4992 # Protein_GI_number: 15833209 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Escherichia coli O157:H7 # 1 429 68 496 496 862 100.0 0 MKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLVDTQGQEFIDCLGG FGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSG TESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV PFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMIL DEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHT TTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGML MAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALA AMRVSVEEA >gi|299856431|gb|ADWV01000020.1| GENE 62 66860 - 67192 479 110 aa, chain - ## HITS:1 COG:ECs3956 KEGG:ns NR:ns ## COG: ECs3956 COG0073 # Protein_GI_number: 15833210 # Func_class: R General function prediction only # Function: EMAP domain # Organism: Escherichia coli O157:H7 # 1 110 1 110 110 193 99.0 8e-50 METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGEKTLQTVTSLVPYYSEEELMG KTVVVLCNLQKAKMRGETSECMLLCAETDDGSESVLLTPERMMPAGVRVV >gi|299856431|gb|ADWV01000020.1| GENE 63 67411 - 68394 1055 327 aa, chain + ## HITS:1 COG:ebgR KEGG:ns NR:ns ## COG: ebgR COG1609 # Protein_GI_number: 16130970 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 327 1 327 327 659 99.0 0 MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEKLEYKTSSARKLQTGAV NQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTNCYEHSGLPDIKNVTGILI VGKPTPALRAAACALTDNICFIDFHEPGSGYDAVDIDLARISKEIIDFYINQGVNRIGFI GGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSSSSGYELAKQMLAREDYPKALFV ASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTARFTFPPLSTVRIHSEMMGSQGVNLV YEKARDGRALPLLVFVPSKLKLRGTTR >gi|299856431|gb|ADWV01000020.1| GENE 64 68578 - 71670 3130 1030 aa, chain + ## HITS:1 COG:ECs3958 KEGG:ns NR:ns ## COG: ECs3958 COG3250 # Protein_GI_number: 15833212 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli O157:H7 # 1 1030 13 1042 1042 2180 99.0 0 MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPLSGQWNFHFFDHPLQVP EAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRIFTLS DGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDISAMVKTGDNLLCVRVMQW ADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRTDFDEAYCDATLSCEVVLENLAA SPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTL KDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKD LQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDVESHGFANVGDISRITDDPQW EKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRDA EVVDIISTMYTRVPLMNEFGEYPHPKPRIICEYAHAMGNGPGGLTEYQNVFYKHDCIQGH YVWEWCDHGIQAQDDNGNVWYKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIA PVKIHALDLTRGELKVENKLWFTTLDDYTLHAEVRVEGETLATQQIKLRDVAPNSEAPLQ ITLPQLDAREAFLNITVTKDSRTRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLE DDRLSCTVRGYNFAITFSKMSGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQ PNHLQIMQEHLRDFAVEQSDGEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSG ERYGDYPHIIPCIGFTMGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENY PFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHCNELQRSDDI TLNLDHQLLGLGSNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFF STNLHSENKQ >gi|299856431|gb|ADWV01000020.1| GENE 65 71667 - 72116 423 149 aa, chain + ## HITS:1 COG:ebgC KEGG:ns NR:ns ## COG: ebgC COG2731 # Protein_GI_number: 16130972 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Escherichia coli K12 # 1 149 1 149 149 287 100.0 4e-78 MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVETDSATDALFT GHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDI HEAYRFICNNAVKKVVLKVTIEDGYFHNK >gi|299856431|gb|ADWV01000020.1| GENE 66 72179 - 73612 1429 477 aa, chain + ## HITS:1 COG:ECs3960 KEGG:ns NR:ns ## COG: ECs3960 COG0531 # Protein_GI_number: 15833214 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 477 1 477 477 807 99.0 0 MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFFLATIFYFIPFCLIIAE FVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTSLLPRVIAYASYAFLGYEY IMTPVATTIISMVLFAFSTWVSTNGAKMLGPITSVTSTLMLLLTLSYILLAGTALVGGVQ PADPITVDSMIPNFNWAFLGVTTWIFMAAGGAESVAVYVNDVKGGSKSFVKVIILAGIFI GVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAYFGLPEALMNRFVGLVSFTAMFGSL LMWTATPVKIFFSEIPEGIFGKKTVELNENGVPARAAWIQFLIVIPLMIIPMLGSNTVQD LMNTIINMTAAASMLPPLFIMLAYLNLRAKLDHLPRDFRMGSRRTGIIVVSMLIAIFAVG FVASTFPTGANILTIIFYNVGGIVIFLGFAWWKYSKYIKGLTAEERHIEATPASNVD >gi|299856431|gb|ADWV01000020.1| GENE 67 73746 - 74816 1054 356 aa, chain + ## HITS:1 COG:no KEGG:B21_02898 NR:ns ## KEGG: B21_02898 # Name: ygjJ # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 356 1 356 356 698 100.0 0 MKLITAPCRALLALPFCYAFSAAGEEARPAEHDDTKTPAITSTSSPSFRFYGELGVGGYM DLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGI NRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGYVIPNTRDIMTALKVQNLSGN FRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLAEGITWMNGLEITD GTGQLYLTGLLTPNFAARAWHHTGRADGLDVPGSESGMMVSAMYEALKGVYLSTAYTYAK HRPDHADDETTSFMQFGIWYEYGGGRFATAFDSRFYMKNASHDPSDQIFLMQYFYW >gi|299856431|gb|ADWV01000020.1| GENE 68 74833 - 77184 2745 783 aa, chain + ## HITS:1 COG:no KEGG:JW3051 NR:ns ## KEGG: JW3051 # Name: ygjK # Def: predicted glycosyl hydrolase # Organism: E.coli_J # Pathway: not_defined # 1 783 1 783 783 1584 99.0 0 MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALV QKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDGELLEKLEAKEGKPLSDKTIA GEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH INGSTTLYTTYSHLLTSQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP EQTRVAVKAIETLNGNWRSPGGAVKFNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP DIAKENIRAVFSWQIQPGDRVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW SVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY VANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA KRYRQLAQQLADYINTCMFDPATQYFYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN GAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFF RKQ >gi|299856431|gb|ADWV01000020.1| GENE 69 77510 - 79528 1710 672 aa, chain + ## HITS:1 COG:ZygjL_1 KEGG:ns NR:ns ## COG: ZygjL_1 COG1902 # Protein_GI_number: 15803622 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Escherichia coli O157:H7 EDL933 # 1 354 1 354 354 717 98.0 0 MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGI APDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSAL QAPINRFVPHELTHEEILQLIDDFAHCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQR SDQWGGDYRNRMRFAVEVVRTVRERVGNDFIIIYRLSMLDLVEGGGTFAETVELAQAIEA AGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDIL SRGDADIVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRA CHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIP GKEEFYETLRYYRRMIEVTGVTLKLNHTVTADQLQAFDETILASGIVPRVPPIDGIDHPK VLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIARFCNEWGIDSSLQQ AGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKI DDDGLHVVINGETQVLAVDNVVICAGQESNRALAQPLIDSGKTVHLIGGCDVAMELDARR AIAQGTRLALEI >gi|299856431|gb|ADWV01000020.1| GENE 70 79646 - 80782 448 378 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225082609|ref|YP_002654106.1| ribosomal protein L11 methyltransferase, putative [marine gamma proteobacterium HTCC2148] # 13 368 18 365 371 177 33 2e-43 MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSC ALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLAL LEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNE PPLADAPQTVSWKLEGTDWTIHNHANVFSRNGLDIGARFFMQHLPENLEGEIVDLGCGNG VIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNALSGVEPFRFN AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTI ATNNKFVVLKTVKLGRRR >gi|299856431|gb|ADWV01000020.1| GENE 71 80867 - 81370 465 167 aa, chain + ## HITS:1 COG:ECs3967 KEGG:ns NR:ns ## COG: ECs3967 COG1451 # Protein_GI_number: 15833221 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Escherichia coli O157:H7 # 1 167 13 179 179 334 99.0 5e-92 MNNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATDKALWQYTQDLKNQFLR NAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKAEIRVATVFRNAPEPFLRMIVV HELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQLSLGQDKI >gi|299856431|gb|ADWV01000020.1| GENE 72 81447 - 82130 474 227 aa, chain + ## HITS:1 COG:ygjQ KEGG:ns NR:ns ## COG: ygjQ COG2949 # Protein_GI_number: 16130981 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli K12 # 4 227 7 230 230 456 97.0 1e-128 MQPRLLLRICFSRRTLKIGCLLLLIAGATIFIADRVMVNASKQLTWSDVNAVPARNVGLL LGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVI FCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKH GFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAKE >gi|299856431|gb|ADWV01000020.1| GENE 73 82191 - 83195 808 334 aa, chain + ## HITS:1 COG:ygjR KEGG:ns NR:ns ## COG: ygjR COG0673 # Protein_GI_number: 16130982 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 334 1 334 334 658 98.0 0 MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTS LEAMAESDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQ VVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPSFSN GSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS VLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHL VDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL >gi|299856431|gb|ADWV01000020.1| GENE 74 83478 - 84443 1268 321 aa, chain + ## HITS:1 COG:ECs3970 KEGG:ns NR:ns ## COG: ECs3970 COG0861 # Protein_GI_number: 15833224 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 319 1 319 321 550 100.0 1e-156 MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAWSLVWVTLSLLFNAAFW WYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVL GAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGH LRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTS NLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFIGIKMLIVDFYHIPIAVSLGVVFGI LVMTFIINAWVNYRHDKQRGE Prediction of potential genes in microbial genomes Time: Sun May 15 15:42:55 2011 Seq name: gi|299856430|gb|ADWV01000021.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont20.1, whole genome shotgun sequence Length of sequence - 83037 bp Number of predicted genes - 70, with homology - 67 Number of transcription units - 37, operones - 14 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 92 - 151 3.4 1 1 Tu 1 . + CDS 317 - 1264 912 ## COG0042 tRNA-dihydrouridine synthase + Prom 1748 - 1807 5.8 2 2 Op 1 2/0.692 + CDS 1944 - 3380 1328 ## COG1538 Outer membrane protein 3 2 Op 2 . + CDS 3433 - 4194 202 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Term 4246 - 4297 -0.7 4 3 Tu 1 . - CDS 4324 - 4902 686 ## COG0586 Uncharacterized membrane-associated protein - Prom 5003 - 5062 5.2 + Prom 4980 - 5039 3.1 5 4 Tu 1 . + CDS 5072 - 5659 578 ## APECO1_4414 hypothetical protein + Term 5673 - 5718 11.2 + Prom 5703 - 5762 5.1 6 5 Tu 1 . + CDS 5833 - 6765 1057 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 6773 - 6809 4.3 - Term 6709 - 6737 1.3 7 6 Tu 1 . - CDS 6803 - 8518 1674 ## COG0277 FAD/FMN-containing dehydrogenases - Prom 8550 - 8609 4.2 + Prom 8509 - 8568 4.1 8 7 Tu 1 . + CDS 8714 - 11011 2852 ## COG1472 Beta-glucosidase-related glycosidases + Term 11023 - 11053 3.4 + Prom 11111 - 11170 2.1 9 8 Op 1 13/0.000 + CDS 11222 - 12139 1124 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 10 8 Op 2 24/0.000 + CDS 12146 - 13303 1254 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 11 8 Op 3 24/0.000 + CDS 13296 - 14222 1116 ## COG1125 ABC-type proline/glycine betaine transport systems, ATPase components 12 8 Op 4 . + CDS 14227 - 14958 882 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component + Term 15207 - 15246 1.2 - Term 14760 - 14799 -0.7 13 9 Op 1 . - CDS 14939 - 15046 167 ## 14 9 Op 2 . - CDS 15106 - 15837 636 ## COG0789 Predicted transcriptional regulators - Prom 15924 - 15983 4.4 + Prom 15888 - 15947 3.5 15 10 Op 1 9/0.000 + CDS 16059 - 17744 1224 ## COG3275 Putative regulator of cell autolysis 16 10 Op 2 2/0.692 + CDS 17741 - 18460 882 ## COG3279 Response regulator of the LytR/AlgR family 17 10 Op 3 . + CDS 18507 - 18977 453 ## COG4807 Uncharacterized protein conserved in bacteria + Term 18983 - 19028 9.2 - Term 18772 - 18816 4.0 18 11 Tu 1 . - CDS 19018 - 19479 559 ## COG4808 Uncharacterized protein conserved in bacteria - Prom 19537 - 19596 1.7 - Term 19495 - 19525 2.0 19 12 Op 1 . - CDS 19604 - 21604 1180 ## COG2801 Transposase and inactivated derivatives 20 12 Op 2 . - CDS 21601 - 22737 861 ## ECO103_2597 hypothetical protein 21 12 Op 3 . - CDS 22730 - 25009 1618 ## c2650 hypothetical protein 22 12 Op 4 . - CDS 25020 - 26108 897 ## COG0714 MoxR-like ATPases - Prom 26183 - 26242 7.6 + Prom 26307 - 26366 5.6 23 13 Tu 1 . + CDS 26541 - 26630 64 ## + Term 26654 - 26685 1.7 24 14 Tu 1 . + CDS 27149 - 27238 69 ## + Term 27308 - 27345 -1.0 - Term 27243 - 27286 3.0 25 15 Tu 1 . - CDS 27348 - 27665 129 ## G2583_2655 hypothetical protein - Term 27685 - 27718 3.7 26 16 Op 1 . - CDS 27726 - 31358 2663 ## B21_02004 hypothetical protein 27 16 Op 2 1/0.846 - CDS 31368 - 35162 2238 ## COG3831 Uncharacterized conserved protein - Prom 35242 - 35301 3.9 - Term 35260 - 35291 2.4 28 17 Tu 1 . - CDS 35303 - 37336 2374 ## COG0143 Methionyl-tRNA synthetase - Prom 37366 - 37425 4.4 + Prom 37381 - 37440 2.7 29 18 Op 1 . + CDS 37468 - 38577 1129 ## COG0489 ATPases involved in chromosome partitioning + Term 38616 - 38679 10.0 + Prom 38698 - 38757 2.8 30 18 Op 2 . + CDS 38840 - 39121 153 ## JW2099 hypothetical protein + Term 39148 - 39202 15.2 + Prom 39275 - 39334 7.1 31 19 Op 1 7/0.000 + CDS 39414 - 39956 418 ## COG3539 P pilus assembly protein, pilin FimA + Term 39994 - 40025 2.5 + Prom 39958 - 40017 4.2 32 19 Op 2 2/0.692 + CDS 40037 - 40252 150 ## COG3121 P pilus assembly protein, chaperone PapD 33 19 Op 3 10/0.000 + CDS 40246 - 40710 235 ## COG3121 P pilus assembly protein, chaperone PapD 34 19 Op 4 . + CDS 40726 - 43206 1482 ## COG3188 P pilus assembly protein, porin PapC + Prom 43239 - 43298 3.4 35 20 Tu 1 . + CDS 43415 - 44254 371 ## G2583_2644 putative fimbrial-like adhesin protein + Term 44311 - 44341 4.3 36 21 Tu 1 . - CDS 44336 - 44674 288 ## COG5455 Predicted integral membrane protein - Prom 44722 - 44781 3.6 - Term 44780 - 44810 1.1 37 22 Tu 1 . - CDS 44893 - 45717 556 ## COG2215 ABC-type uncharacterized transport system, permease component - Prom 45744 - 45803 3.9 + Prom 45755 - 45814 5.0 38 23 Tu 1 . + CDS 45838 - 46110 355 ## COG1937 Uncharacterized protein conserved in bacteria + Prom 46124 - 46183 3.0 39 24 Op 1 12/0.000 + CDS 46414 - 47121 460 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 40 24 Op 2 2/0.692 + CDS 47118 - 47918 712 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 41 24 Op 3 2/0.692 + CDS 47983 - 48801 663 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 42 24 Op 4 . + CDS 48853 - 49599 559 ## COG2188 Transcriptional regulators - Term 49479 - 49537 16.2 43 25 Op 1 5/0.154 - CDS 49573 - 50538 893 ## COG0524 Sugar kinases, ribokinase family 44 25 Op 2 4/0.462 - CDS 50535 - 51539 1003 ## COG1397 ADP-ribosylglycohydrolase 45 25 Op 3 . - CDS 51536 - 52813 1442 ## COG0477 Permeases of the major facilitator superfamily - Prom 52861 - 52920 3.2 + Prom 52864 - 52923 3.9 46 26 Tu 1 . + CDS 53070 - 54122 1165 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes + Term 54285 - 54318 5.2 + Prom 54194 - 54253 4.3 47 27 Op 1 . + CDS 54432 - 55286 725 ## COG0191 Fructose/tagatose bisphosphate aldolase 48 27 Op 2 4/0.462 + CDS 55315 - 56577 1011 ## COG4573 Predicted tagatose 6-phosphate kinase 49 27 Op 3 13/0.000 + CDS 56587 - 57039 245 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 50 27 Op 4 10/0.000 + CDS 57070 - 57354 332 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 51 27 Op 5 7/0.000 + CDS 57358 - 58713 1565 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 52 27 Op 6 3/0.538 + CDS 58762 - 59802 665 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 59808 - 59842 7.4 + Prom 59827 - 59886 3.6 53 28 Tu 1 . + CDS 59908 - 60681 511 ## COG1349 Transcriptional regulators of sugar metabolism 54 29 Tu 1 . - CDS 60763 - 61662 648 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Prom 61689 - 61748 3.4 + Prom 61813 - 61872 2.3 55 30 Tu 1 . + CDS 62017 - 62394 202 ## ECSE_2357 hypothetical protein - Term 62548 - 62587 5.1 56 31 Tu 1 . - CDS 62724 - 64085 1510 ## COG0826 Collagenase and related proteases 57 32 Op 1 . - CDS 64188 - 64484 230 ## EC55989_2339 conserved hypothetical protein, putative plasmid stabilisation system protein 58 32 Op 2 . - CDS 64486 - 64737 299 ## COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain - Prom 64921 - 64980 3.1 - Term 64945 - 64983 3.3 59 33 Tu 1 . - CDS 64991 - 65323 379 ## COG3422 Uncharacterized conserved protein 60 34 Op 1 40/0.000 - CDS 65514 - 66236 870 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 61 34 Op 2 10/0.000 - CDS 66233 - 67636 1368 ## COG0642 Signal transduction histidine kinase 62 34 Op 3 5/0.154 - CDS 67633 - 69048 1375 ## COG0477 Permeases of the major facilitator superfamily 63 34 Op 4 10/0.000 - CDS 69049 - 72126 3353 ## COG0841 Cation/multidrug efflux pump 64 34 Op 5 27/0.000 - CDS 72127 - 75249 3428 ## COG0841 Cation/multidrug efflux pump 65 34 Op 6 . - CDS 75249 - 76496 1353 ## COG0845 Membrane-fusion protein - Prom 76568 - 76627 3.4 + Prom 77623 - 77682 3.3 66 35 Op 1 . + CDS 77712 - 78371 512 ## COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 67 35 Op 2 . + CDS 78449 - 79129 507 ## ECO103_2550 hypothetical protein 68 35 Op 3 . + CDS 79126 - 81066 990 ## COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains + Term 81289 - 81326 -0.3 - Term 81020 - 81070 1.3 69 36 Tu 1 . - CDS 81078 - 82430 1551 ## COG0443 Molecular chaperone - Prom 82458 - 82517 4.1 70 37 Tu 1 . + CDS 82564 - 83035 449 ## COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase Predicted protein(s) >gi|299856430|gb|ADWV01000021.1| GENE 1 317 - 1264 912 315 aa, chain + ## HITS:1 COG:yohI KEGG:ns NR:ns ## COG: yohI COG0042 # Protein_GI_number: 16130078 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Escherichia coli K12 # 1 315 1 315 315 638 99.0 0 MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTP SGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIY QGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEH IDWQAIGEIRQRLNIPVIANGEIWDWQSAQQCIAISGCDAVMIGRGALNIPNLSRVVKYN EPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATGLFQHVRVLNNS PDIARAIQAIDIEKL >gi|299856430|gb|ADWV01000021.1| GENE 2 1944 - 3380 1328 478 aa, chain + ## HITS:1 COG:ECs3025 KEGG:ns NR:ns ## COG: ECs3025 COG1538 # Protein_GI_number: 15832279 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Escherichia coli O157:H7 # 1 478 28 505 505 876 99.0 0 MNRDSFYPAIACFPLLLMLAGCAPMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWWL EYHDNQLTSLINNALQNAPDMQVAEQRIQLAEAQAKAIATQDGPQIDFSADMERQKMSAE GLMGPFALNDPAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQT RQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDINA SKTRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRAD LQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPI FDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQVQTLAEKNQHQAQIERDAL RVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGGGYKR >gi|299856430|gb|ADWV01000021.1| GENE 3 3433 - 4194 202 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 57 241 52 238 242 82 30 7e-15 MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLD LGKLPEGAQALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQ IAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKTMALELVRHKILVNA VAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIASLVAWLCSEGANYTTGQSLIVD GGFMLANPQFNPE >gi|299856430|gb|ADWV01000021.1| GENE 4 4324 - 4902 686 192 aa, chain - ## HITS:1 COG:yohD KEGG:ns NR:ns ## COG: yohD COG0586 # Protein_GI_number: 16130074 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Escherichia coli K12 # 1 192 13 204 204 333 100.0 9e-92 MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLY LCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPP KIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWL KRRGKKKPDHQA >gi|299856430|gb|ADWV01000021.1| GENE 5 5072 - 5659 578 195 aa, chain + ## HITS:1 COG:no KEGG:APECO1_4414 NR:ns ## KEGG: APECO1_4414 # Name: yohC # Def: hypothetical protein # Organism: E.coli_APEC # Pathway: not_defined # 1 195 9 203 203 338 100.0 9e-92 MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTI LKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLS GLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVL LALTVILWGYGYRLF >gi|299856430|gb|ADWV01000021.1| GENE 6 5833 - 6765 1057 310 aa, chain + ## HITS:1 COG:pbpG KEGG:ns NR:ns ## COG: pbpG COG1686 # Protein_GI_number: 16130072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Escherichia coli K12 # 1 310 4 313 313 530 100.0 1e-150 MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVYSRVRLNSEISRKDMLLLA LMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGLSVHNVSTARDLTK LLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGH CLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTWIETGKVMPVPAAALSYKKQKAAQM AAAGQTAQND >gi|299856430|gb|ADWV01000021.1| GENE 7 6803 - 8518 1674 571 aa, chain - ## HITS:1 COG:ECs3020 KEGG:ns NR:ns ## COG: ECs3020 COG0277 # Protein_GI_number: 15832274 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Escherichia coli O157:H7 # 1 571 1 571 571 1170 99.0 0 MSSMTTTDNKAFLNELARLVGHSHLLTDPAKTARYRKGFRSGQGDALAVVFPGSLLELWR VLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTLRLDKLHVLGKGEQVLAYP GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARIN EDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTP ARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANF ENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGTDKMPFFFNLKGRTDAMLEKVKFFRPH FTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLKMAGDGVGEAKSWLVDYFKQAEGDFF VCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRNDTEWYEHLPPEIDSQ LVHKLYYGHFMCYVFHQDYIVKKGVDVHALKEQMLELLQQRGAQYPAEHNVGHLYKAPET LQKFYRENDPTNSMNPGIGKTSKRKNWQEVE >gi|299856430|gb|ADWV01000021.1| GENE 8 8714 - 11011 2852 765 aa, chain + ## HITS:1 COG:bglX KEGG:ns NR:ns ## COG: bglX COG1472 # Protein_GI_number: 16130070 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Escherichia coli K12 # 1 765 1 765 765 1508 99.0 0 MKWLCSVGIAVSLALQPALADDLFGNHPLTPEARDAFVTELLKKMTVDEKIGQLRLISVG PDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVF PISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTYL TSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTA ADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKSGKVTMEELDDAARHVLNVKYDMGLFN DPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKNRLETLPLKKSATIAVVGPLA DSKRDVMGSWSAAGVADQSVTVLTGIKNSVGENGKVLYAKGANVTSDKGIIDFLNQYEEA VKVDPRSPQEMIDEAVQTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKA TGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFP RSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSA PTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL >gi|299856430|gb|ADWV01000021.1| GENE 9 11222 - 12139 1124 305 aa, chain + ## HITS:1 COG:yehZ KEGG:ns NR:ns ## COG: yehZ COG1732 # Protein_GI_number: 16130069 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Escherichia coli K12 # 1 305 1 305 305 560 99.0 1e-159 MPLLKLWAGSLVMLAAVSLPLQAASPVKVGSKIDTEGALLGNIILQVLESHGVPTVNKVQ LGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAQQGYEKVKKLDSEHNKLIW LTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLQEGGTFKLAASAEFIERADALPAFEK AYGFKLGQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLSDPQGVQ PIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTLQQLNASIAVEGLDAKKVAADYLKQ KGWTK >gi|299856430|gb|ADWV01000021.1| GENE 10 12146 - 13303 1254 385 aa, chain + ## HITS:1 COG:yehY KEGG:ns NR:ns ## COG: yehY COG1174 # Protein_GI_number: 16130068 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Escherichia coli K12 # 1 385 1 385 385 605 98.0 1e-173 MTYLRINPVLALLLLLTVIAAALPFISYAPNRLVSGEGRHLWQLWPQTIWMLVGVGCAWL TACFIPGKKGSICALILAQFVFVLLVWGAGKAATQLAQNGSALARTSLGSGFWLAAALAL LACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDLSLMKEYANRQDVFDDALAQH LTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNVIQTVPSVALFGLLIAPLAALVT AFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRF LHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIGAGGFGALVFQGLLSSAIDLVLLGVIP VIVLAVLIDALFDLLIALLKVKRND >gi|299856430|gb|ADWV01000021.1| GENE 11 13296 - 14222 1116 308 aa, chain + ## HITS:1 COG:yehX KEGG:ns NR:ns ## COG: yehX COG1125 # Protein_GI_number: 16130067 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, ATPase components # Organism: Escherichia coli K12 # 1 308 1 308 308 582 98.0 1e-166 MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGEIRF AGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQLQKWSRARIDDRIDELMTL LGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDEPFGALDPVTRGALQQEMTRI HRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGNPLTMLTRPANDFVRQFFGRSEL GVRLLSLRSVADYVRREERAEGEALAEEMTLRDALSLFVARGCEVLPVMNTQGQPCGTLH FQDLLEEA >gi|299856430|gb|ADWV01000021.1| GENE 12 14227 - 14958 882 243 aa, chain + ## HITS:1 COG:ECs3015 KEGG:ns NR:ns ## COG: ECs3015 COG1174 # Protein_GI_number: 15832269 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Escherichia coli O157:H7 # 1 243 1 243 243 380 100.0 1e-105 MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGIS SLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIA LILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLRKVELPLAAPVILAGVRTSVI INIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLVQALSQ HAK >gi|299856430|gb|ADWV01000021.1| GENE 13 14939 - 15046 167 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRIAKIGVIALFLFMAFGGIGGVMLAGYTFILRAG >gi|299856430|gb|ADWV01000021.1| GENE 14 15106 - 15837 636 243 aa, chain - ## HITS:1 COG:yehV KEGG:ns NR:ns ## COG: yehV COG0789 # Protein_GI_number: 16130065 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 243 1 243 243 466 100.0 1e-131 MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNG VQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHL FIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIQDTTRLWL EGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFP LGI >gi|299856430|gb|ADWV01000021.1| GENE 15 16059 - 17744 1224 561 aa, chain + ## HITS:1 COG:yehU KEGG:ns NR:ns ## COG: yehU COG3275 # Protein_GI_number: 16130064 # Func_class: T Signal transduction mechanisms # Function: Putative regulator of cell autolysis # Organism: Escherichia coli K12 # 1 561 1 561 561 1078 100.0 0 MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWF GLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLL GGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMM VTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLY QELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCS LHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQY ERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRP SEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGT SQLLDTGRVAISARREGQHLMLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGIS VACEPDSYTRITLRLPWRDEA >gi|299856430|gb|ADWV01000021.1| GENE 16 17741 - 18460 882 239 aa, chain + ## HITS:1 COG:ECs2936 KEGG:ns NR:ns ## COG: ECs2936 COG3279 # Protein_GI_number: 15832190 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Escherichia coli O157:H7 # 1 239 6 244 244 459 100.0 1e-129 MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL >gi|299856430|gb|ADWV01000021.1| GENE 17 18507 - 18977 453 156 aa, chain + ## HITS:1 COG:ECs2935 KEGG:ns NR:ns ## COG: ECs2935 COG4807 # Protein_GI_number: 15832189 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 300 100.0 7e-82 MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKEDEEGFQRCPDIVLSSF LNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTDDILAILTEQQFRVSMPEI TAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKS >gi|299856430|gb|ADWV01000021.1| GENE 18 19018 - 19479 559 153 aa, chain - ## HITS:1 COG:ECs2934 KEGG:ns NR:ns ## COG: ECs2934 COG4808 # Protein_GI_number: 15832188 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 153 5 157 157 245 100.0 3e-65 MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETK IQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQG ISGINVSAEDAKKGITMAQMELVMKAAGFKEVK >gi|299856430|gb|ADWV01000021.1| GENE 19 19604 - 21604 1180 666 aa, chain - ## HITS:1 COG:ECs2931 KEGG:ns NR:ns ## COG: ECs2931 COG2801 # Protein_GI_number: 15832185 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 666 1 667 745 1257 96.0 0 MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENGALIATFSDGVRTQLA NSQALKEAQCSCGASGMCRHRVMLVLSYQRLCATVQPTEKEEEWDPAIWLEELATLPDAT RKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA VQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGQTCRQYVQQLSQALWLGGISQP LIHYEAAFNRALQAAEACNWRWVSESLRQLRASVDAFHTRASHYHAGECLRQLAALNSRL NCAQEMARRDSVGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT DPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS LGWDSSRQTLDAQVISGEGEDNLLTLSLPASACSPFAVERMAALLQQTDDPVSLVSGFVS FVDGQLTLEPRVMMTKTRAWALDAETAPVAPLPSASVLPVPSTAHQLLMRCQALLIQLLH NGWRYQEQSAISQAELLANDLSAVGFYRLAHVLGQFRNTESEARVEAMNNGVLLCEQLFP MLQQQG >gi|299856430|gb|ADWV01000021.1| GENE 20 21601 - 22737 861 378 aa, chain - ## HITS:1 COG:no KEGG:ECO103_2597 NR:ns ## KEGG: ECO103_2597 # Name: yehP # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 378 1 378 378 737 100.0 0 MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSG GLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRA VLHTKHLMNPEVLAAARQIVRQVVEEIMARLAKEVRQAFSGVRDRRRRSLIPLARNFDFK STLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIHSAVMAAC LWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKS VIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQI AAMTPGELASWLAENLQS >gi|299856430|gb|ADWV01000021.1| GENE 21 22730 - 25009 1618 759 aa, chain - ## HITS:1 COG:no KEGG:c2650 NR:ns ## KEGG: c2650 # Name: yehM # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 759 26 784 784 1398 97.0 0 MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSY CQYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDLPCWAQSEEVDDSPDTQEE SQALLLRATRMDNSDTLWDHLFEDESQQTALPSALAHYFAQLRGDSPGDALNRLREAFMA RWIGWAMQQNNGDVLVVCGGWHAPVLAKMWRECPQEINTPELPSLADAVTGCYLTPYSEK RLDVLAGYLSGMPAPVWQNWCWQWGLQQAGEQLLKTVLTRLRQHKLPASTADMAAAHLHA MALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGD GFGKLAPSTPQPPLPKDVTCELERTAISLPAELTLNRFNPNGLAQSQVLHRLAILEIPGI VRQQGSTLTLAGNGEERWKLTRPLSQHAALIEAACFGATLQEAARHKLEADMLDAGGIGS ITTCLSQAALAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWRLDEISGMQGAQ ILQTTLCAAIDRTLWLCESNGRPDEKEFHAHLHSWQALCHILRDLHSGVQLPGISLSAAV ALLERRSQAIHAPALDRGAAHGALMRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALA RHQLACQPTFIAGFSSHLNQLSDADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQ LPVSALQMPLHCPPQAIAHHQQLEQQALASLQNWGVFHV >gi|299856430|gb|ADWV01000021.1| GENE 22 25020 - 26108 897 362 aa, chain - ## HITS:1 COG:ECs2927 KEGG:ns NR:ns ## COG: ECs2927 COG0714 # Protein_GI_number: 15832181 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Escherichia coli O157:H7 # 1 362 23 384 384 716 99.0 0 MSPQNNHLQRPPAAVLYADELAKLKQNDNAPCPPGWQLSLPAARAFILGDSAQNISRKVV ISPSAVERMLVTLATGRGLMLVGEPGTAKSLLSELLATAISGDAGLTIQGGASTTEDQIK YGWNYALLINHGPSTEALVPAPLYQGMRDGKIVRFEEITRTPLEVQDCLLGMLSDRVMTV PELTGEASQLYAREGFNIIATANTRDRGVNEMSAALKRRFDFETVFPIMDFAQELELVAS ASARLLAHSGIPHKVPDAVLELLVRTFRDLRANGEKKTSMDTLTAIMSTAEAVNVAHAVG VRAWFLANRAGEPADLVDCIAGTIVKDNEEDRARLRRYFEQRVATHKEAHWQAYYQARHR LP >gi|299856430|gb|ADWV01000021.1| GENE 23 26541 - 26630 64 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDSLTQKLTVLIAVLELLVALLRLIDLLK >gi|299856430|gb|ADWV01000021.1| GENE 24 27149 - 27238 69 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDTLTQKLTVLIAVLELLVALLRLIDLLK >gi|299856430|gb|ADWV01000021.1| GENE 25 27348 - 27665 129 105 aa, chain - ## HITS:1 COG:no KEGG:G2583_2655 NR:ns ## KEGG: G2583_2655 # Name: yehK # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 105 1 105 105 192 100.0 4e-48 MIVQKELVAIYDYEVPVPEDPFSFRLEIHKCSELFTGSVYRLERFRLHPTFHQRDREDAD PLINDALIYIRDECIDERKLRGESPETVIAIFNRELQNIFNQEIE >gi|299856430|gb|ADWV01000021.1| GENE 26 27726 - 31358 2663 1210 aa, chain - ## HITS:1 COG:no KEGG:B21_02004 NR:ns ## KEGG: B21_02004 # Name: yehI # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 1210 1 1210 1210 2312 96.0 0 MDKELPWLADNAQLELKYKKGKTPLSHRKWPGEPVPVITESIIQTLGDELLQKAEKKKNI VWRYENFSLEWQSAITQAINLIGEHKPSIPARTMAALACIAQNDSQQLLDEIVQQEGLEY ATEVVIARQFIARCYESDPLVVTLQYQDEDYGYGYRSETYNEFDLRLRKHLSLAEESCWQ RCADKLIAALPGITKVRRPFIALILPEKPEIANELVGLECPRTHFHSKEWLKVVANDPTA VRKLEHYWSQDIFSDREASYMSHENHFGYAACAALLREQGLAAIPRLAMYAHKEDCGSLL VQINHPQVIRTLLLVADKNKPSLQRVAKYHKNFPHATLAALAELLALTEPPARPGYPIIE DKKLPAQQKARDEYWRTLLQTLMASQPQLAEEMMQWLSTQARAVLNSYLSAPPKPVIDST DNSNLPEILVSPPWRSKKKMTAPRLDLAPLELTPQVYWQPGERERLAATEPARYFSTESL AERMEQKSGRVVLQELGFGDDVWLFLNYILPGKLDAARNSLIVQWHYYQGRVEEILNGWN SPEAQLAEQALRSGHIEALINIWENDNYSRYRPEKSVWNLYLLAQLPREMALTFWLRINE KKHLFAGEDYFLSILGLDALPGLMLAFSHRPKETFPLILNFGATELALPIARVWHRFAGQ RNLARQWILQWPEHTATALIPLIFTKSSDKSEAALLALRLLYEHGHGELLQTVANRWQRT DLWPALEQLLKQSPIEIYPARIPKAPDFWHPQMWSRPRLITNNQPVTDDALEIIGEMLRF TQGGRFYSGLEQLKTFCQPQTLAAFAWDLFTAWQQAGAPVKDNWAFLALSLFGDESTARD LTTQILGWPQEGKSARAVSGLNILTLMNNDMALIQLHHISQRAKSRPLRDNAAEFLQVVA ENRGLSQEELADRLVPTLGLDDPQALSFDFGPRQFTVRFDENLNPVIFDQQNVRQKSVPR LRADDDQLKAPEALARLKGLKKDATQVSKNLLPRLETALRTTRRWSLADFHSLFVNHPFT RLVTQRLIWGAYPANEPRCLLNAFRVAAEGEFCNAQDEPIDLPADALIGIAHPLEMTVEM RSEFAQLFADYEIMPPFRQLARCTVLLTPDESTSNSLTRWEGKSATVGQLMGMRYKGWES GYEDAFVYDLGEYRLVLKFSPGFNHYNVDSKALMSFRSLRVYRDNKSVTFAELDVFDLSE ALSAPDVIFH >gi|299856430|gb|ADWV01000021.1| GENE 27 31368 - 35162 2238 1264 aa, chain - ## HITS:1 COG:molR_g1_1 KEGG:ns NR:ns ## COG: molR_g1_1 COG3831 # Protein_GI_number: 16130053 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 112 1 112 112 203 98.0 2e-51 MRHFIYQDEKSHKFWAVEQQGNELHISWGKVGTKGQSQIKSFSDAAAAAKAELKLIAEKV KKGYVEQAKVNSLQPSQTVTGSLKVADLSTIIQEQPSFVAETRAPDKNTDAVLPWLAKDI AVVFPPEVVHTTLSHRRFPGVPVQQADKLTQLRRLACSVSQRDNKTATFDFSACSLEWQN TVAQAISQIDGLKTTQLPSPVMAVLTALEMKCTRYKVREDVMDQIVQEGGLEYATDVIIH LQQIDIKWDYANNVIIILPSGIAPDYLEQYSRFELRLRKHLSLAEESLWQKCAQKLIAAI PHIPEWRQPLIALLLPEKPEIAHEIAQRLLGQKKLPSLEWLKIVATDEHILASLEKYHEP YAIFDDYYCGAIWSATVLQEQGVAALPRFAPYAASDYCADVLRHINHPFALTLLIRVAGH TKRCHDRMTKAIAAFPHAAMAALTELLGQKEENSWRIMLMTMLISQPALAEQVIPWLSTP AVAVLKSCQQQLTQPSNHASADLLPAVVVSPPWLSKKKKSPIPVLDLAPLGIEPICYLTE EISNQLLAKYIWYSKHITVSHEESTTNLLARMGFQRRIAGTYIKAPEAVVEAWLNEDYST LLSEFKVFHSPTGHYWQLGILTTLPLEKAVKAWNALTLSPHTDTEYAMLHFGLKGLPRLV NSLARYPQEALPITNYFAASELAPAVARAFNKLKTLRENARSWLLKYPEHALTGLLPAAL GKAGEAQDNARAALRMLTENGHQPLLQEIARRYNQPEVTDAVNALLALDPLDNHPTKIPT LPAFYQPSLWTRPVLKANAQSLPDSALLHLGEMLRFPQEEALYPGLLQVKDVCSADSLAG FAWDLFTAWQTAGAPSKESWAFTALGVLGNDDTARKLTPLIRAWPGESQHKRATVGLDIL AAIGSDIALMQLNGIAQKLKFKALQERAKEKIADIAESRELTVAELEDRLAPDLGLDDNG SLLLDFGPRQFTVSFDETLKPFVRDVSGSRLKDLPKPNKSDDESRSNDAVNRYKLLKKDA RTVAAQQVARLESAMCLRRRWSPENFQLFLVEHPLVRHLTRRLIWGVYSAENQLLACFRV AEDNSYSTADDDLFTLPEGDISIGTPHVLEISPTDAAAFGQLFADYELLPPFRQLDRNSY ALTEAERNASELTRWAGRKCPSGRVMGLANKGWIKGEPQDGGWIGWMIKPLGRWSLIMEI DEGFAVGMSPAELSAEQLLSKLWLWEGKAESYGWGSNSTQEAQFSVLDAITASELINDIE ALFE >gi|299856430|gb|ADWV01000021.1| GENE 28 35303 - 37336 2374 677 aa, chain - ## HITS:1 COG:ZmetG_1 KEGG:ns NR:ns ## COG: ZmetG_1 COG0143 # Protein_GI_number: 15802593 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Escherichia coli O157:H7 EDL933 # 1 567 1 567 567 1204 99.0 0 MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIM LKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFI KNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSG ATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFG FEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVY FHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYY TAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQLYK TFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSM GINLFRVLMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMKQV EALVETSKEEVKAAAAPVTGPLADDPIQETITFDDFAKVDLRVALIENAEFVEGSDKLLR LTLDLGGEKRNVFSGIRSAYPDPQALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKD IFLLSPDAGAKPGHQVK >gi|299856430|gb|ADWV01000021.1| GENE 29 37468 - 38577 1129 369 aa, chain + ## HITS:1 COG:ECs2919 KEGG:ns NR:ns ## COG: ECs2919 COG0489 # Protein_GI_number: 15832173 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Escherichia coli O157:H7 # 1 369 11 379 379 726 100.0 0 MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAWMDDTLHVELVMPFVWH SAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPGINGVKNIIAVSSGKGGVG KSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLAT NSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPV TGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSVHICSNCGHHEPIFGTGGAEK LAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVI PGEISFRAV >gi|299856430|gb|ADWV01000021.1| GENE 30 38840 - 39121 153 93 aa, chain + ## HITS:1 COG:no KEGG:JW2099 NR:ns ## KEGG: JW2099 # Name: yehE # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 93 1 93 93 189 100.0 3e-47 MNKYWLSGIIFLAYGLASPAFSSETATLAINGRISPPTCSMAMVNGQPQQHCGQLTYNVD TRHLFSSPVKGVTTEVVVAGSDSKRRIVLNRYD >gi|299856430|gb|ADWV01000021.1| GENE 31 39414 - 39956 418 180 aa, chain + ## HITS:1 COG:yehD KEGG:ns NR:ns ## COG: yehD COG3539 # Protein_GI_number: 16130049 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 180 1 180 180 315 99.0 4e-86 MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTT VFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGYY LYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQSGDVLSSLVMRVAQD >gi|299856430|gb|ADWV01000021.1| GENE 32 40037 - 40252 150 71 aa, chain + ## HITS:1 COG:yehC KEGG:ns NR:ns ## COG: yehC COG3121 # Protein_GI_number: 16130048 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 67 16 82 239 135 97.0 3e-32 MKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTS LPPEKFRFLSC >gi|299856430|gb|ADWV01000021.1| GENE 33 40246 - 40710 235 154 aa, chain + ## HITS:1 COG:yehC KEGG:ns NR:ns ## COG: yehC COG3121 # Protein_GI_number: 16130048 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 154 86 239 239 278 99.0 3e-75 MLTPPVAKIGANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQN RIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVTISDVKANNVKVNYETIMI APLESQSVNVKSNNANNWYLTIIDDHGNYISDKI >gi|299856430|gb|ADWV01000021.1| GENE 34 40726 - 43206 1482 826 aa, chain + ## HITS:1 COG:yehB KEGG:ns NR:ns ## COG: yehB COG3188 # Protein_GI_number: 16130047 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 826 1 826 826 1600 98.0 0 MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDI YVNKQWRGKYEIIVKDNPQETCLSIEVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDI GVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYVSQYYSDYKASGNSKSTYVRF NSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSV RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQ LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQ AGYQYGFNNLLTLYGGSMVANNYYAFTLGTGWNTRFGAISVDATKSHSKQDNGDVFDGQS YQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQND FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYILAASQ AYDENHHEEKRFNIFISIPFDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSR DQFNYGVNLSYQNQGNETTAGANLTWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGG VNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDS EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQPLMFGYEVNDIHGHNIGVV GQGSQLFIRTNEVPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ >gi|299856430|gb|ADWV01000021.1| GENE 35 43415 - 44254 371 279 aa, chain + ## HITS:1 COG:no KEGG:G2583_2644 NR:ns ## KEGG: G2583_2644 # Name: yehA # Def: putative fimbrial-like adhesin protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 279 66 344 344 454 99.0 1e-126 MSPSDIIVGLYNDTIKLNLHFEWTNKNNITLSNNQTSFTSGYSVTVTPAASNAKVNVSAG GGGSVMINGVATLSSASSSTRRSAAVQFLLCLLGGKSWDACVNSYRNALAQNAGVYSFNL TLSYNPITTTCKPDDLLITLDSIPVSQLPATGNKATINSKQGDIILRCKNLLGQQNQTSR KMQVYLSSSDLLTNSNTILKGAEDNGVGFILESNGSSVTLLNITNSSKGYTNLKEIAAKS KLTDTTVSIPITASYYVYDTNKVKSGALEATALINVKYD >gi|299856430|gb|ADWV01000021.1| GENE 36 44336 - 44674 288 112 aa, chain - ## HITS:1 COG:yohN KEGG:ns NR:ns ## COG: yohN COG5455 # Protein_GI_number: 16130045 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Escherichia coli K12 # 1 112 61 172 172 209 100.0 1e-54 MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYR TDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR >gi|299856430|gb|ADWV01000021.1| GENE 37 44893 - 45717 556 274 aa, chain - ## HITS:1 COG:ZyohM KEGG:ns NR:ns ## COG: ZyohM COG2215 # Protein_GI_number: 15802585 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 EDL933 # 1 274 1 283 283 448 90.0 1e-126 MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIAIKGTIKQAVMLGLAAT ISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIIGTAFWMFWRTWRGERNWLENM HEYDHEHHHHDHEDHHDHGHHHHHEHGEYQDAHARAHANDIKRRFDGREVTNWQILLFGL TGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGLALTLVTVGVGAAISVQQVAKRWS GFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR >gi|299856430|gb|ADWV01000021.1| GENE 38 45838 - 46110 355 90 aa, chain + ## HITS:1 COG:ECs2911 KEGG:ns NR:ns ## COG: ECs2911 COG1937 # Protein_GI_number: 15832165 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 90 1 90 90 145 98.0 3e-35 MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAAIRGAVNGLIREVIKGH LTEHIVHQGDELKREEDLDVVLKVLDSYIK >gi|299856430|gb|ADWV01000021.1| GENE 39 46414 - 47121 460 235 aa, chain + ## HITS:1 COG:ECs2907 KEGG:ns NR:ns ## COG: ECs2907 COG2145 # Protein_GI_number: 15832161 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Escherichia coli O157:H7 # 1 235 28 262 262 400 94.0 1e-111 MTNDVVQTFTANTLLALGASPAMVIETEEASQFAAIASALLINVGTLTQLRAQSMCAAVE QAKSSQTPWTLDPVAVGALDYRRRFCLELLSHKPTAIRGNASEIMALAGIANGGRGVDTT DAAANAIPAAQTLARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVV ATCCALPGDTLENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA >gi|299856430|gb|ADWV01000021.1| GENE 40 47118 - 47918 712 266 aa, chain + ## HITS:1 COG:thiD KEGG:ns NR:ns ## COG: thiD COG0351 # Protein_GI_number: 16130041 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Escherichia coli K12 # 1 266 1 266 266 516 100.0 1e-146 MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQNTRGVQSVYRIEPDFV AAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQNVVLDTVMLAKSGDPLLSPS AVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLEQGRSLLAMGCGAVLMKGGHL DDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAALAALRPRHTNWADTVQEAKSWL SSALAQADTLEVGHGIGPVHHFHAWW >gi|299856430|gb|ADWV01000021.1| GENE 41 47983 - 48801 663 272 aa, chain + ## HITS:1 COG:yegX KEGG:ns NR:ns ## COG: yegX COG3757 # Protein_GI_number: 16130040 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Escherichia coli K12 # 1 272 4 275 275 549 98.0 1e-156 MQLRITSRKKLTSLLCALGLISIVAIYPRQTVNFFYSTAVQITDYIHFYSYRPVKSFAIR IPASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKATEGEKLVDPYFSRNWQLSR ENGLLRGAYHYFSPSVAAPVQARLFLQTVDFSQGDFPAVLDVEERGKLSAKELRKRVSQW LKMVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAHYYQRRPDNDGMAWRFWQHSDRG QVDGINGPVDFNVFHGTVEELQAFVDGIKETP >gi|299856430|gb|ADWV01000021.1| GENE 42 48853 - 49599 559 248 aa, chain + ## HITS:1 COG:ECs2904 KEGG:ns NR:ns ## COG: ECs2904 COG2188 # Protein_GI_number: 15832158 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 477 99.0 1e-134 MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHGNILPGERDLSQLTGVS RITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFSQQVVLRGKKPDTLWVNKR VVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESWVPAHLIHDVDAIGISLYDYF RSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLLIKQVALDQQQRPIEYSISHCRSD LYVFVCEE >gi|299856430|gb|ADWV01000021.1| GENE 43 49573 - 50538 893 321 aa, chain - ## HITS:1 COG:ECs2903 KEGG:ns NR:ns ## COG: ECs2903 COG0524 # Protein_GI_number: 15832157 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 321 1 321 321 628 98.0 1e-180 MSGARLHTLLPELTTRQPVMVVGAAVIDVIADAYALPWRGCDIELKQQSVNVGGCALNIA VALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAEGDNGWCLALVEPDGERTF MSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGELLVEWLEELQDVTPFIDFGPR IGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGEQWQEKFAAPLIVRLDK EGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVLAGLASGLPLADAVLLGNAVASWVV GHRGGDCAPTREELLLAHKNV >gi|299856430|gb|ADWV01000021.1| GENE 44 50535 - 51539 1003 334 aa, chain - ## HITS:1 COG:yegU KEGG:ns NR:ns ## COG: yegU COG1397 # Protein_GI_number: 16130037 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Escherichia coli K12 # 1 334 1 334 334 640 99.0 0 MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPGPKENNAACYFNRAEFT DDTSMALCLADALLEREGKIDPDLIGRNILDWALRFDAFNKNVLGPTSKIALNAIRDGKP VAELENNGVTNGAAMRVSPLGCLLPARDVDSFIDDVALASSPTHKSDLAVAGAVVIAWAI SRAIDGESWSAIVDSLPSIARHAQQKRTTTFSASLAARLEIALKIVRNADGTESASEQLY QVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCANLGGDTDTIGAMATAICGALHGVNA IDPALKAELDAVNQLDFNRYATALAKYRQQREVV >gi|299856430|gb|ADWV01000021.1| GENE 45 51536 - 52813 1442 425 aa, chain - ## HITS:1 COG:yegT KEGG:ns NR:ns ## COG: yegT COG0477 # Protein_GI_number: 16130036 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 425 1 425 425 765 100.0 0 MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYACTAIAAILSPILVGSI TDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYSLTYMPTIALTNSIAFANV PDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPTNIPLLITAGSSALLGVFAFF LPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCSFLFAMPLAFYYIFANGYLTEVG MKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLLLGLVTAAIRYGFFIYGSADEYFTY ALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMRTAAQGLITLCCQGFGSLLGYRLGGVM MEKMFAYQEPVNGLTFNWSGMWTFGAVMIAIIAVLFMIFFRESDNEITAIKVDDRDIALT QGEVK >gi|299856430|gb|ADWV01000021.1| GENE 46 53070 - 54122 1165 350 aa, chain + ## HITS:1 COG:ECs2900 KEGG:ns NR:ns ## COG: ECs2900 COG1830 # Protein_GI_number: 15832154 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Escherichia coli O157:H7 # 1 350 25 374 374 695 100.0 0 MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTG RLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVS RRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIE EISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLS DAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA >gi|299856430|gb|ADWV01000021.1| GENE 47 54432 - 55286 725 284 aa, chain + ## HITS:1 COG:ECs2899 KEGG:ns NR:ns ## COG: ECs2899 COG0191 # Protein_GI_number: 15832153 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Escherichia coli O157:H7 # 1 284 3 286 286 557 99.0 1e-159 MYVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAPVIIAGTPGTFTHAGTE NLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVMIDASHLPFAQNISRVKEV VDFCHRFDVSVEAELGQLGGQEDDVQVNEADAFYTNPAQAREFAEATGIDSLAVAIGTAH GMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDIQQTIKLGICKINVATELKNAFS QALKNYLTEHPEATDPRDYLQSAKSAMRDVVSKVIADCGCEGRA >gi|299856430|gb|ADWV01000021.1| GENE 48 55315 - 56577 1011 420 aa, chain + ## HITS:1 COG:gatZ KEGG:ns NR:ns ## COG: gatZ COG4573 # Protein_GI_number: 16130033 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted tagatose 6-phosphate kinase # Organism: Escherichia coli K12 # 1 420 1 420 420 862 99.0 0 MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMT PADFREFVFTIADKVGFARERIILGGDHLGPNCWQQENADAAMEKSVELVKEYVRAGFSK IHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVPVPGGEAS AIQSVHITHVEDTANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEA QPLAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFAILKVGPALTFALREAIFALAQIEQ ELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTGFNDSLLDIRYSLSDRIRYYWPHSRIKN SVETMMVNLEGVDIPLGMISQYLPKQFERIQSGELSAIPHQLIMDKIYDVLRAYRYGCAE >gi|299856430|gb|ADWV01000021.1| GENE 49 56587 - 57039 245 150 aa, chain + ## HITS:1 COG:ECs2897 KEGG:ns NR:ns ## COG: ECs2897 COG1762 # Protein_GI_number: 15832151 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 # 1 150 1 150 150 294 100.0 4e-80 MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALIAREAEFPTGIMLEQHAIAI PHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVAVSLVIALIVENPQQQLKLLRCLFGKL QQPDIVETLITLPETQLKEYFTKYVLDSDE >gi|299856430|gb|ADWV01000021.1| GENE 50 57070 - 57354 332 94 aa, chain + ## HITS:1 COG:gatB KEGG:ns NR:ns ## COG: gatB COG3414 # Protein_GI_number: 16130031 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Escherichia coli K12 # 1 94 1 94 94 179 98.0 8e-46 MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEIETYMDGVHLICTTAKV DRSFGDIPLVHGMPFISGVGIEALQNKILTILQG >gi|299856430|gb|ADWV01000021.1| GENE 51 57358 - 58713 1565 451 aa, chain + ## HITS:1 COG:ECs2895 KEGG:ns NR:ns ## COG: ECs2895 COG3775 # Protein_GI_number: 15832149 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Escherichia coli O157:H7 # 1 451 1 451 451 806 99.0 0 MFSEVMRYILDLGPTVMLPVVIIIFSKILGMKAGDCFKAGLHIGIGFVGIGLVIGLMLDS IGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPIAILVNVAMLLTRMTRVVN VDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKLGDWFARDTRNFFELEGIAIP HGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKFGPFGEPVTVGFVMGLIIGILAG YDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAKQARSRLQAKFGGQEFLIGLDPALL LGHTAVVSASLIFIPLTILIAVCVPGNQVLPFGDLATIGFFVAMAVAVHRGNLFRTLISG VIIMSITLWIATQTIGLHTQLAANAGALKAGGMVASMDQGGSPITWLLIQVFSPQNIPGF IIIGAIYLTGIFMTWRRARGFIKQEKVVLAE >gi|299856430|gb|ADWV01000021.1| GENE 52 58762 - 59802 665 346 aa, chain + ## HITS:1 COG:ECs2894 KEGG:ns NR:ns ## COG: ECs2894 COG1063 # Protein_GI_number: 15832148 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli O157:H7 # 1 346 1 346 346 714 100.0 0 MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHE FSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEY IVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCA VALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVP QTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWE TASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP >gi|299856430|gb|ADWV01000021.1| GENE 53 59908 - 60681 511 257 aa, chain + ## HITS:1 COG:gatR KEGG:ns NR:ns ## COG: gatR COG1349 # Protein_GI_number: 16132228 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli K12 # 1 257 3 259 259 454 99.0 1e-128 MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIM SGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAK NITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADG IDAVNGITTFNEGYSVSGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDAVS EVDKLALQKTRVKLITV >gi|299856430|gb|ADWV01000021.1| GENE 54 60763 - 61662 648 299 aa, chain - ## HITS:1 COG:ECs2892 KEGG:ns NR:ns ## COG: ECs2892 COG1597 # Protein_GI_number: 15832146 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Escherichia coli O157:H7 # 1 299 1 299 299 595 99.0 1e-170 MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKLGVAT VIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSLGIPEALDKALKLAIAGN AIAIDMAQVNKQTCFINMATGGFGTRITTETPEKLKAALGGVSYIIHGLMRMDTLQPDRC EIRGENFHWQGDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLK SDEDNPNIIEGASSWFDIQAPHEITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLR >gi|299856430|gb|ADWV01000021.1| GENE 55 62017 - 62394 202 125 aa, chain + ## HITS:1 COG:no KEGG:ECSE_2357 NR:ns ## KEGG: ECSE_2357 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 125 1 125 125 252 100.0 3e-66 MPLLYLNTRECRWYLMGEGEMKKIAAISLISIFIMSGCAVHNDETSIGKFGLAYKSNIQR KLDNQYYTEAEASLARGRISGAENIVKNDAAHFCVTQGKKMQIVDLKTEGAGLHGVARLT FKCGE >gi|299856430|gb|ADWV01000021.1| GENE 56 62724 - 64085 1510 453 aa, chain - ## HITS:1 COG:yegQ KEGG:ns NR:ns ## COG: yegQ COG0826 # Protein_GI_number: 16130021 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Escherichia coli K12 # 1 453 1 453 453 929 100.0 0 MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQLGINEAHALGK KFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIMLVREHFPEMPIHLSVQAN AVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDMEIEIFVHGALCMAYSGRCLLS GYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKYEPIPVQNVEPTLGIGAPTDKVF MIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVERLTKMGVHSLKIEGRTKSFYYCAR TAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGYTEGFLRRHTHDDYQNYEYGYSVSDRQ QFVGEFTGERKGDLAAVAVKNKFSVGDSLELMTPQGNINFTLEHMENAKGEAMPIAPGDG YTVWLPVPQDLELNYALLMRNFSGETTRNPHGK >gi|299856430|gb|ADWV01000021.1| GENE 57 64188 - 64484 230 98 aa, chain - ## HITS:1 COG:no KEGG:EC55989_2339 NR:ns ## KEGG: EC55989_2339 # Name: not_defined # Def: conserved hypothetical protein, putative plasmid stabilisation system protein # Organism: E.coli_55989 # Pathway: not_defined # 1 98 1 98 98 195 100.0 4e-49 MRIIKLMPKANEDLEGIWYYSYHHFGEPQADRYVEHLSDVLQILSNNNIGTPRPELGEGI FVLPFERHVIYFLQSPGEIIVIRILNQNQDATRHLHWS >gi|299856430|gb|ADWV01000021.1| GENE 58 64486 - 64737 299 83 aa, chain - ## HITS:1 COG:STM2955 KEGG:ns NR:ns ## COG: STM2955 COG3609 # Protein_GI_number: 16766261 # Func_class: K Transcription # Function: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain # Organism: Salmonella typhimurium LT2 # 1 83 24 106 118 128 90.0 2e-30 MARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRDMLAEGL SSGEAQPWEKDAFLRKVKAGIRK >gi|299856430|gb|ADWV01000021.1| GENE 59 64991 - 65323 379 110 aa, chain - ## HITS:1 COG:yegP KEGG:ns NR:ns ## COG: yegP COG3422 # Protein_GI_number: 16130020 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 110 14 123 123 169 99.0 9e-43 MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIASVRSNSPQEERYEKKT ASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGTSQTVKDNT >gi|299856430|gb|ADWV01000021.1| GENE 60 65514 - 66236 870 240 aa, chain - ## HITS:1 COG:baeR KEGG:ns NR:ns ## COG: baeR COG0745 # Protein_GI_number: 16130019 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 240 1 240 240 462 99.0 1e-130 MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPPDLILL DLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVAR VKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLDLTPAEFRLLKTLSHEPGKVF SREHLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFIRAVYGVGYRWEADACRIV >gi|299856430|gb|ADWV01000021.1| GENE 61 66233 - 67636 1368 467 aa, chain - ## HITS:1 COG:baeS KEGG:ns NR:ns ## COG: baeS COG0642 # Protein_GI_number: 16130018 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 467 1 467 467 910 100.0 0 MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIKHGNEQRLQLLSDALGE QYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHGWRTQFWVVDQNNKVLVGP RAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFDKQQRQTSWLIVALATLLAAL ATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSEDELGKLAQDFNQLASTLEKNQQM RRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPETVASLQAEVGTLTKLVDDLHQLSM SDEGALAYQKAPVDLIPLLEVAGGAFRERFASRGLKLQFSLPDSITVFGDRDRLMQLFNN LLENSLRYTDSGGSLQISAGQRDKTVRLTFADSAPGVSDDQLQKLFERFYRTEGSRNRAS GGSGLGLAICLNIVEAHNGRIIAAHSPFGGVSITVELPLERDLQREV >gi|299856430|gb|ADWV01000021.1| GENE 62 67633 - 69048 1375 471 aa, chain - ## HITS:1 COG:yegB KEGG:ns NR:ns ## COG: yegB COG0477 # Protein_GI_number: 16130017 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 471 1 471 471 749 99.0 0 MTDLPDSTRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAV MLPASGWLADKVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARALQGVGGAMMVPVGR LTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIA TLLLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSKGTGLSPLTIAGLVAVGVVALVL YLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAG LMMIPMVLGSMGMKRIVVHVVNRFGYRRVLVATTLGLSLVTLLFMTTALLGWYYVLPFVL FLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGSQH VSVDSGTTQTVFMYTWLSMALIIALPAFIFARVPNDTHQNVAISRRKRSAQ >gi|299856430|gb|ADWV01000021.1| GENE 63 69049 - 72126 3353 1025 aa, chain - ## HITS:1 COG:yegO KEGG:ns NR:ns ## COG: yegO COG0841 # Protein_GI_number: 16130016 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli K12 # 1 1025 1 1025 1025 1867 99.0 0 MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMA SSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLP SGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAPTISQIDGVGDVDVGGS SLPAVRVGLNPQALFNQGVSLDDVRTAISNANVRKPQGALEDGTHRWQIQTNDELKTAAE YQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSI RAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATI IPAVVVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKP LQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLT LTPMMCGWMLKASKPREQKRLRGFGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALN IWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTG GSRVNSGMMFITLKPRDERSETAQQIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNAS YQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDV QAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSY FAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAG TAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNA PFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLA ALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPK QTVTE >gi|299856430|gb|ADWV01000021.1| GENE 64 72127 - 75249 3428 1040 aa, chain - ## HITS:1 COG:ECs2883 KEGG:ns NR:ns ## COG: ECs2883 COG0841 # Protein_GI_number: 15832137 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 1040 1 1040 1040 1806 99.0 0 MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLY PGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITLQFQLTLPLDVAEQEVQAA INAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPMTQVEDMVETRVAQKISQISG VGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPSRAVTLSA NDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAENSWLGAWANKEQAIVMNVQRQPGA NIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVNDTQFELMMAIALVVMIIYL FLRNIPATIIPGFAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENIS RYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVAI LISAVVSLTLTPMMCARMLSQESLRKQNRFSRASEKMFDRIIAAYGRGLAKVLNHPWLTL SVALSTLLLSVLLWVFIPKGFFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDP AVQSLTSFVGVDGTNPSLNSARLQINLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQP TQDLTIDTQVSRTQYQFTLQATSLDALSTWVPELMEKLQQLPQLSDVSSDWQDKGLVAYV NVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTI RLTSSDGGVVPLSSIAKIEQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEK TLNLPVDITTQFQGSTLAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPT AGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQA CLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYL LFDRLALWTKSRFARHEEEA >gi|299856430|gb|ADWV01000021.1| GENE 65 75249 - 76496 1353 415 aa, chain - ## HITS:1 COG:ECs2882 KEGG:ns NR:ns ## COG: ECs2882 COG0845 # Protein_GI_number: 15832136 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 1 415 50 464 464 720 99.0 0 MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSQSAAPGATKQAQQSPAGGRRGMRSGPLA PVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDP SQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIK ADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTL PESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQD DALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQ KVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQSATTPEEKATSREYAKKGARS >gi|299856430|gb|ADWV01000021.1| GENE 66 77712 - 78371 512 219 aa, chain + ## HITS:1 COG:yegL KEGG:ns NR:ns ## COG: yegL COG4245 # Protein_GI_number: 16130013 # Func_class: R General function prediction only # Function: Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain # Organism: Escherichia coli K12 # 1 219 1 219 219 406 99.0 1e-113 MSEQITFATSDFASNPEPRCPCILLLDVSGSMSGRPINELNAGLVTFRDELLADPLALKR VELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITKALDMVEERKREYRANGIS YYRPWIFLITDGAPTDEWQAAANKVFRGEEDKRFAFFSIGVQGADMKTLAQISVRQPLPL QGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTSV >gi|299856430|gb|ADWV01000021.1| GENE 67 78449 - 79129 507 226 aa, chain + ## HITS:1 COG:no KEGG:ECO103_2550 NR:ns ## KEGG: ECO103_2550 # Name: yegK # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 226 28 253 253 432 98.0 1e-120 MQVAWLNDQQPLLVMFLADGAGSVSQGGEGATLAVNEAMAYMSQKVQGGELGLNDILATD IVLTVCQRLFAEAEAKELAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDFGHGLQLPLT PMVGEYANMTHFITDEDAVSRLETFTSTERVHKVAAFTDGIQRLALNMLDNSPHVPFFTP FFNGLASATQEQLDLLPELLKQFLSSPAVNERTDDDKTLALALWLP >gi|299856430|gb|ADWV01000021.1| GENE 68 79126 - 81066 990 646 aa, chain + ## HITS:1 COG:yegI KEGG:ns NR:ns ## COG: yegI COG4248 # Protein_GI_number: 16130010 # Func_class: R General function prediction only # Function: Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains # Organism: Escherichia coli K12 # 5 646 7 648 648 1273 97.0 0 MKPTLYTATGECVTPGRELGKGGEGAVYDINEFVDSVAKIYHTPPPALKQDKLAFMAATA DAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYSPAHRRQRYPHCAWDFLLY VARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDSDSFQINANGTLHLCEVGVSH FTPPELQTLSSFVGFERTANHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITH FRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSL RQQLKKCPVSAMHVYPAHLTDCPWCALDNQGVIYFIDLGEEVITTGGDFVLAKVWAMVMA SVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILLEIALSALSLLLCGLQAEPRYIILVP VLAAIWIIGSLTSKAYKAEVQQRREAFNRAKMDYDHLVRQIQQVGGLEGFIAKRTMLEKM KDEILGLPEEEKRALAALHDTARERQKQKFLEGFFIDVASIPGVGPARKAALRSFGIETA ADVTRRGVKQVKGFGDHLTQAVIDWKASCERRFVFRPNEAITPADRQAVMAKMTAKRHRL ESTLTVGATELQRFRLHAPARTMPLMEPLRQAAEKLAQAQADLSRC >gi|299856430|gb|ADWV01000021.1| GENE 69 81078 - 82430 1551 450 aa, chain - ## HITS:1 COG:ECs2878 KEGG:ns NR:ns ## COG: ECs2878 COG0443 # Protein_GI_number: 15832132 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Escherichia coli O157:H7 # 1 450 22 471 471 888 99.0 0 MFIGFDYGTANCSVAVMRDGKPQLLKMENDSTLLPSMLCAPTREAVSEWLYRHHDVPADD DETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKP QQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINFQGLGGDEANAQAQGILERAA KRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGGGTTDCSLLLMGPQWRSRLDREA SLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEKGIALPILPWWNAVAINDVPAQSDF YSSANGRLLNDLVRDAREPEKVALLQKVWRQRLSYRLVRSAEECKIALSSVAETRASLPF ISDELATLISQQGLESALSQPLARILEQVQLALDNAQEKPDVIYLTGGSARSPLIKKALA EQLPGIPIAGGDDFGSVTAGLARWAEVVFR >gi|299856430|gb|ADWV01000021.1| GENE 70 82564 - 83035 449 157 aa, chain + ## HITS:1 COG:ECs2877 KEGG:ns NR:ns ## COG: ECs2877 COG0122 # Protein_GI_number: 15832131 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase # Organism: Escherichia coli O157:H7 # 1 157 1 157 282 308 96.0 4e-84 MYTLNWQPPYDWSWMLGFLAARAVSGVETVAEDYYARSLAVGEYRGVVTAIPDIARHTLH INLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGKLGAARPGLRLPGCIDAFEQGVRA ILGQLVSVAMAAKLTAKVVQLYGERLDDFPEYICFPT Prediction of potential genes in microbial genomes Time: Sun May 15 15:44:17 2011 Seq name: gi|299856429|gb|ADWV01000022.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont21.1, whole genome shotgun sequence Length of sequence - 80212 bp Number of predicted genes - 78, with homology - 77 Number of transcription units - 41, operones - 15 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 796 625 ## COG0513 Superfamily II DNA and RNA helicases - Term 1203 - 1247 2.2 2 2 Tu 1 . - CDS 1349 - 2332 667 ## COG0598 Mg2+ and Co2+ transporters - Prom 2421 - 2480 5.1 + Prom 2454 - 2513 2.3 3 3 Tu 1 . + CDS 2587 - 3819 918 ## COG2199 FOG: GGDEF domain 4 4 Tu 1 . - CDS 3840 - 4403 635 ## COG2840 Uncharacterized protein conserved in bacteria - Prom 4500 - 4559 4.7 - Term 4451 - 4487 -0.4 5 5 Tu 1 . - CDS 4733 - 5641 665 ## COG0583 Transcriptional regulator - Prom 5745 - 5804 2.3 + Prom 5694 - 5753 2.3 6 6 Op 1 3/0.643 + CDS 5817 - 7127 990 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 7 6 Op 2 4/0.357 + CDS 7127 - 8572 893 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 8 7 Op 1 2/0.857 + CDS 8729 - 10135 951 ## COG2978 Putative p-aminobenzoyl-glutamate transporter 9 7 Op 2 4/0.357 + CDS 10146 - 10661 292 ## COG0350 Methylated DNA-protein cysteine methyltransferase + Prom 10771 - 10830 6.2 10 8 Op 1 7/0.000 + CDS 10856 - 11608 800 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 11630 - 11690 10.1 + Prom 11663 - 11722 3.7 11 8 Op 2 . + CDS 11760 - 12710 1043 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 12732 - 12762 3.0 - Term 12720 - 12749 2.8 12 9 Tu 1 . - CDS 12760 - 13017 321 ## ECSP_1858 predicted inner membrane protein - Prom 13246 - 13305 4.8 + Prom 13072 - 13131 4.3 13 10 Tu 1 . + CDS 13261 - 14292 840 ## COG0668 Small-conductance mechanosensitive channel + Term 14494 - 14528 0.3 - Term 14289 - 14331 -0.6 14 11 Tu 1 . - CDS 14343 - 15956 1549 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Term 16124 - 16152 -0.9 15 12 Tu 1 . - CDS 16293 - 17192 245 ## COG0583 Transcriptional regulator - Prom 17330 - 17389 3.2 + Prom 17235 - 17294 2.5 16 13 Op 1 1/0.929 + CDS 17333 - 18250 1048 ## COG1073 Hydrolases of the alpha/beta superfamily 17 13 Op 2 1/0.929 + CDS 18250 - 19182 884 ## COG1073 Hydrolases of the alpha/beta superfamily 18 13 Op 3 1/0.929 + CDS 19188 - 19838 487 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases + Term 19858 - 19896 7.0 + Prom 19937 - 19996 5.9 19 14 Tu 1 . + CDS 20129 - 20857 326 ## COG2866 Predicted carboxypeptidase 20 15 Tu 1 . - CDS 20832 - 21797 906 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 21860 - 21919 4.3 + Prom 21828 - 21887 2.3 21 16 Tu 1 . + CDS 21916 - 22422 669 ## COG2077 Peroxiredoxin + Term 22424 - 22477 11.2 - Term 22418 - 22456 10.2 22 17 Tu 1 . - CDS 22466 - 24007 1482 ## COG3283 Transcriptional regulator of aromatic amino acids metabolism - Prom 24036 - 24095 6.5 - Term 24060 - 24102 1.9 23 18 Op 1 . - CDS 24155 - 25051 809 ## COG3768 Predicted membrane protein 24 18 Op 2 . - CDS 25128 - 25217 142 ## 25 18 Op 3 . - CDS 25214 - 26611 1219 ## COG3106 Predicted ATPase - Prom 26778 - 26837 2.2 + Prom 26678 - 26737 3.8 26 19 Op 1 2/0.857 + CDS 26766 - 27227 410 ## COG1609 Transcriptional regulators 27 19 Op 2 . + CDS 27285 - 27764 385 ## COG1609 Transcriptional regulators + Term 27782 - 27835 5.5 28 20 Op 1 . - CDS 27875 - 28780 1059 ## B21_01307 hypothetical protein 29 20 Op 2 3/0.643 - CDS 28825 - 29907 1181 ## COG3839 ABC-type sugar transport systems, ATPase components 30 20 Op 3 11/0.000 - CDS 29921 - 30580 565 ## COG0637 Predicted phosphatase/phosphohexomutase 31 20 Op 4 4/0.357 - CDS 30577 - 32775 1543 ## COG1554 Trehalose and maltose hydrolases (possible phosphorylases) 32 20 Op 5 16/0.000 - CDS 32841 - 33884 830 ## COG0673 Predicted dehydrogenases and related proteins 33 20 Op 6 3/0.643 - CDS 33906 - 34694 990 ## COG1082 Sugar phosphate isomerases/epimerases 34 20 Op 7 5/0.214 - CDS 34712 - 35764 1226 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 35 20 Op 8 38/0.000 - CDS 35795 - 36637 939 ## COG0395 ABC-type sugar transport system, permease component 36 20 Op 9 35/0.000 - CDS 36624 - 37505 1006 ## COG1175 ABC-type sugar transport systems, permease components 37 20 Op 10 2/0.857 - CDS 37526 - 38818 1594 ## COG1653 ABC-type sugar transport system, periplasmic component 38 20 Op 11 7/0.000 - CDS 38832 - 40136 852 ## COG0366 Glycosidases 39 20 Op 12 1/0.929 - CDS 40170 - 40538 271 ## COG0366 Glycosidases - Prom 40645 - 40704 2.7 - Term 40676 - 40709 3.6 40 21 Op 1 . - CDS 40723 - 41037 442 ## COG0607 Rhodanese-related sulfurtransferase 41 21 Op 2 . - CDS 41112 - 41333 267 ## S1394 peripheral inner membrane phage-shock protein 42 21 Op 3 . - CDS 41342 - 41701 535 ## COG1983 Putative stress-responsive transcriptional regulator 43 21 Op 4 . - CDS 41701 - 41925 318 ## ECDH10B_1422 phage shock protein B 44 21 Op 5 . - CDS 41979 - 42647 1013 ## COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription - Prom 42779 - 42838 3.8 + Prom 42652 - 42711 3.7 45 22 Tu 1 . + CDS 42814 - 43791 932 ## COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain + Term 44039 - 44067 -1.0 - Term 43669 - 43704 3.1 46 23 Op 1 4/0.357 - CDS 43911 - 45176 1225 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases 47 23 Op 2 6/0.071 - CDS 45214 - 46494 1449 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 48 23 Op 3 4/0.357 - CDS 46496 - 47983 1665 ## COG1012 NAD-dependent aldehyde dehydrogenases 49 24 Op 1 1/0.929 - CDS 48258 - 48815 507 ## COG1396 Predicted transcriptional regulators 50 24 Op 2 . - CDS 48842 - 49594 302 ## COG2071 Predicted glutamine amidotransferases - Prom 49674 - 49733 4.6 + Prom 49671 - 49730 5.4 51 25 Tu 1 . + CDS 49818 - 51236 1185 ## COG0174 Glutamine synthetase + Term 51256 - 51295 1.2 + Prom 51437 - 51496 2.2 52 26 Tu 1 . + CDS 51539 - 52924 1537 ## COG0531 Amino acid transporters + Prom 52966 - 53025 3.9 53 27 Tu 1 . + CDS 53058 - 53303 305 ## Z2493 hypothetical protein + Prom 53534 - 53593 4.0 54 28 Op 1 8/0.000 + CDS 53616 - 55259 1455 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 55 28 Op 2 8/0.000 + CDS 55256 - 56221 588 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 56 28 Op 3 8/0.000 + CDS 56208 - 57098 915 ## COG4171 ABC-type antimicrobial peptide transport system, permease component 57 28 Op 4 8/0.000 + CDS 57098 - 58090 468 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 58 28 Op 5 1/0.929 + CDS 58080 - 58898 448 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 59 28 Op 6 1/0.929 + CDS 58969 - 59319 116 ## COG2852 Uncharacterized protein conserved in bacteria + Prom 59549 - 59608 3.8 60 29 Tu 1 . + CDS 59689 - 60477 1027 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) + Term 60498 - 60528 4.1 + Prom 60481 - 60540 2.7 61 30 Op 1 1/0.929 + CDS 60622 - 61749 332 ## COG4950 Uncharacterized protein conserved in bacteria 62 30 Op 2 4/0.357 + CDS 61817 - 63751 2125 ## COG4776 Exoribonuclease II + Term 63762 - 63798 6.3 + Prom 63839 - 63898 6.4 63 31 Tu 1 . + CDS 63987 - 65972 1209 ## COG2200 FOG: EAL domain + Term 66043 - 66085 3.1 + Prom 65980 - 66039 6.3 64 32 Op 1 . + CDS 66119 - 66292 222 ## EC55989_1446 hypothetical protein + Prom 66294 - 66353 7.3 65 32 Op 2 . + CDS 66382 - 67131 637 ## COG1349 Transcriptional regulators of sugar metabolism + Term 67142 - 67200 4.1 + Prom 67193 - 67252 5.9 66 33 Tu 1 . + CDS 67400 - 67618 376 ## G2583_1624 hypothetical protein + Term 67712 - 67751 8.4 - Term 67704 - 67735 4.1 67 34 Op 1 6/0.071 - CDS 67744 - 68070 477 ## COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins 68 34 Op 2 7/0.000 - CDS 68070 - 68807 639 ## COG0284 Orotidine-5'-phosphate decarboxylase - Prom 68859 - 68918 7.7 69 34 Op 3 8/0.000 - CDS 69000 - 70169 1278 ## COG2956 Predicted N-acetylglucosaminyl transferase 70 34 Op 4 5/0.214 - CDS 70176 - 70484 201 ## PROTEIN SUPPORTED gi|46133578|ref|ZP_00203203.1| COG3771: Predicted membrane protein - Prom 70548 - 70607 2.9 71 35 Tu 1 . - CDS 70633 - 71397 480 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 71418 - 71477 5.2 + Prom 71405 - 71464 1.9 72 36 Tu 1 . + CDS 71567 - 72157 681 ## COG0807 GTP cyclohydrolase II + Term 72180 - 72228 5.5 - Term 72124 - 72160 4.1 73 37 Tu 1 . - CDS 72221 - 74896 2494 ## COG1048 Aconitase A - Prom 74946 - 75005 3.5 - Term 75020 - 75055 4.0 74 38 Op 1 . - CDS 75269 - 75436 116 ## SSON_1865 hypothetical protein 75 38 Op 2 . - CDS 75439 - 75567 87 ## EC55989_1434 hypothetical protein - Prom 75621 - 75680 5.9 - Term 75835 - 75887 9.1 76 39 Tu 1 . - CDS 75898 - 76872 829 ## COG0583 Transcriptional regulator - Prom 76939 - 76998 7.5 - Term 77020 - 77050 2.1 77 40 Tu 1 . - CDS 77082 - 79679 2806 ## COG0550 Topoisomerase IA - Prom 79841 - 79900 3.7 + Prom 79879 - 79938 4.8 78 41 Tu 1 . + CDS 80059 - 80212 239 ## ECIAI1_1292 hypothetical protein Predicted protein(s) >gi|299856429|gb|ADWV01000022.1| GENE 1 1 - 796 625 265 aa, chain - ## HITS:1 COG:ECs1927 KEGG:ns NR:ns ## COG: ECs1927 COG0513 # Protein_GI_number: 15831181 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 1 265 26 290 457 517 100.0 1e-147 MTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELAD QVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLD ALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAI EIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVG QSALSLHGDLEQRDRDQTLVRFANG >gi|299856429|gb|ADWV01000022.1| GENE 2 1349 - 2332 667 327 aa, chain - ## HITS:1 COG:ECs1926 KEGG:ns NR:ns ## COG: ECs1926 COG0598 # Protein_GI_number: 15831180 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Escherichia coli O157:H7 # 1 327 1 327 327 667 100.0 0 MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLHLNYVHHDSAQWLATTP LLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGSTDERPDQLVAMRVYMDGRLIVSTR QRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSEFIEQLHDKIIDLEDNLLDQQ IPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPWMSDDQRRRMQDIADRLGRGLDE IDACIARTGVMADEIAQVMQENLARRTYTMSLMAMVFLPSTFLTGLFGVNLGGIPGGGWQ FGFSIFCILLVVLIGGVALWLHRSKWL >gi|299856429|gb|ADWV01000022.1| GENE 3 2587 - 3819 918 410 aa, chain + ## HITS:1 COG:ydaM_3 KEGG:ns NR:ns ## COG: ydaM_3 COG2199 # Protein_GI_number: 16129302 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 241 410 1 170 170 345 100.0 6e-95 MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAARLLMQDLTFSQLRTGPYSVSSQKELPK YLSDLQNQHDIIEILTVQRKEEETALSCRLVLRELTETEPVIIFEGIEAPATLGLKASRS ANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEIN MLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQTYAGPIEIYGDKLMLCIVHDIT EQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHIND LYGHSKGDEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVA KVSISGLPRFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA >gi|299856429|gb|ADWV01000022.1| GENE 4 3840 - 4403 635 187 aa, chain - ## HITS:1 COG:ECs1924 KEGG:ns NR:ns ## COG: ECs1924 COG2840 # Protein_GI_number: 15831178 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 379 100.0 1e-105 MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQLDNFLTTGFLDIIPLSQ PLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMMFSFIQQAMADGLRNVLII HGKGRDDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRKTAQAKQENWE RHAKRSR >gi|299856429|gb|ADWV01000022.1| GENE 5 4733 - 5641 665 302 aa, chain - ## HITS:1 COG:ECs1923 KEGG:ns NR:ns ## COG: ECs1923 COG0583 # Protein_GI_number: 15831177 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 302 1 302 302 581 99.0 1e-166 MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVT LTDAGESFYQHASLILEELRAAQEEIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQ HPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHP AIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDF LSILPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL QS >gi|299856429|gb|ADWV01000022.1| GENE 6 5817 - 7127 990 436 aa, chain + ## HITS:1 COG:ECs1922 KEGG:ns NR:ns ## COG: ECs1922 COG1473 # Protein_GI_number: 15831176 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 436 6 441 441 773 99.0 0 MESLNQFVNSLAPKLSHWRRDFHHYAESGWVEFRTATLVAEELQQLGYSLALGREVVNES SRMGLPDELTLQREFERARQQGALAQWIAVFEGGFTGIVATLDTGRPGPVMAFRVDMDAL DLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHTAIGLGLAHTLKQFESGLHGVIKLIFQ PAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTKFDAHFTGTAA HAGAKPEDGHNALLAAAQATLALHAIAPHSEGASRVNVGVMQAGSGRNVVPASALLKVET RGASDVINQYVFDRAQQAIQGAATMYGVGVETRLMGAATASSPSPQWVAWLQSQAAQVAG VNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLAAGHHNEKFDFDEQVLAIAV ETLARTALNFPWTRGI >gi|299856429|gb|ADWV01000022.1| GENE 7 7127 - 8572 893 481 aa, chain + ## HITS:1 COG:abgB KEGG:ns NR:ns ## COG: abgB COG1473 # Protein_GI_number: 16129298 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli K12 # 1 481 1 481 481 956 99.0 0 MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLASALESAGFTVTRNVGN IPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTPGENGHGCGHNLLGTAAFA AAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGVFDDVDAALTWHPEAFAGMFN TRTLANIQASWRFKGIAAHAANSPHLGRSALDAVTLMTTGTNFLNEHIIEKARVHYAITD SGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAKIAEGAALMTETTVECRFDKACSSY LPNRTLENAMYHALSHFGTPEWNSEELAFAKQIQATLTPNDRQNSLNNIAATGGENGKVF ALRHRETVLANEVAPYAATDNVLAASTDVGDVSWKLPVAQCFSPCFAVGTPLHTWQLVSQ GRTSIAHKGMLLAAKTMAATTVNLFIDSGLLQECQQEHQQVTDTQPYHCPIPKNVTPSPL K >gi|299856429|gb|ADWV01000022.1| GENE 8 8729 - 10135 951 468 aa, chain + ## HITS:1 COG:abgT KEGG:ns NR:ns ## COG: abgT COG2978 # Protein_GI_number: 16129297 # Func_class: H Coenzyme transport and metabolism # Function: Putative p-aminobenzoyl-glutamate transporter # Organism: Escherichia coli K12 # 1 468 43 510 510 802 99.0 0 MVTTAILSAFGVSAKNPTDGTPVVVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLG AGLAERVGLLPALMVKMASHVNARYASYMVLFIAFFSHISSDAALVIMPPMGALIFLAVG RHPVAGLLAAIAGVGCGFTANLLIVTTDVLLSGISTEAAAAFNPQMHVSVIDNWYFMASS VVVLTIVGGLITDKIIEPRLGQWQGNSDEKLQTLTESQRFGLRIAGVVSLLFIAAIALMV IPENGILRDPINHTVMPSPFIKGIVPLIILFFFVVSLAYGIATRTFRRQADLPHLMIEPM KEMAGFIVMVFPLAQFVAMFNWSNMGKFIAVGLTDILESSGLSGIPAFVGLALLSSFLCM FIASGSAIWSILAPIFVPMFMLLGFHPAFAQILFRIADSSVLPLAPVSPFVPLFLGFLQR YKPDAKLGTYYSLVLPYPLIFLVVWLLMLLAWYLVGLPIGPGIYPRLS >gi|299856429|gb|ADWV01000022.1| GENE 9 10146 - 10661 292 171 aa, chain + ## HITS:1 COG:ogt KEGG:ns NR:ns ## COG: ogt COG0350 # Protein_GI_number: 16129296 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Escherichia coli K12 # 1 171 1 171 171 347 98.0 8e-96 MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDIHYRKEGYERISATNPG GLSDKLSDYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPCGQVMHYGQLAEQLGRPGA ARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKEWLLRHEGYLLL >gi|299856429|gb|ADWV01000022.1| GENE 10 10856 - 11608 800 250 aa, chain + ## HITS:1 COG:ECs1915 KEGG:ns NR:ns ## COG: ECs1915 COG0664 # Protein_GI_number: 15831169 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 1 250 1 250 250 501 100.0 1e-142 MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFK AGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSM VCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRR FAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALA QLAGHTRNVA >gi|299856429|gb|ADWV01000022.1| GENE 11 11760 - 12710 1043 316 aa, chain + ## HITS:1 COG:ECs1914 KEGG:ns NR:ns ## COG: ECs1914 COG0589 # Protein_GI_number: 15831168 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 316 1 316 316 634 100.0 0 MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDFSYEMTTLLSPDERTAM RQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQEVISGGHDLVLKMAHQHD RLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAVNLASEEPYHNALNEKLVKET IELAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYNDAIRGQHLLAMKALRQKFGINE NMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIK PDQYQTPVELDDEEDD >gi|299856429|gb|ADWV01000022.1| GENE 12 12760 - 13017 321 85 aa, chain - ## HITS:1 COG:no KEGG:ECSP_1858 NR:ns ## KEGG: ECSP_1858 # Name: ynaJ # Def: predicted inner membrane protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 85 1 85 85 132 100.0 4e-30 MIMAKLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIPLSEWTTSMYVIQSSMI FVYSLVFTVLLAIPLGIYFLGGEEQ >gi|299856429|gb|ADWV01000022.1| GENE 13 13261 - 14292 840 343 aa, chain + ## HITS:1 COG:ECs1912 KEGG:ns NR:ns ## COG: ECs1912 COG0668 # Protein_GI_number: 15831166 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Escherichia coli O157:H7 # 1 343 1 343 343 672 100.0 0 MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSI INYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSR IIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFS IGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTT IGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWA EWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMDNITPPEQGR >gi|299856429|gb|ADWV01000022.1| GENE 14 14343 - 15956 1549 537 aa, chain - ## HITS:1 COG:mppA KEGG:ns NR:ns ## COG: mppA COG4166 # Protein_GI_number: 16129290 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 537 8 544 544 1064 99.0 0 MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDEPASLDPAKAVGLPEIQ VIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNAKWADGTPVTAQDFVYSWQ RLVDPKTLSPFAWFAALAGINNAQAIIDGKATPDQLGVTAVDAHTLKIQLDKPLPWFVNL TANFAFFPVQKANVESGKEWTKPGNLIGNGAYVLKDRVVNEKLVVVPNTHYWDNAKTVLQ KVTFLPINQESAATKRYLAGDIDITESFPKNMYQKLLKDIPGQVYTPPQLGTYYYAFNTQ KGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPAWHFTPDVTAGFTPEPSPFEQMSQEEL NAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQKIAIAVASMWKKNLGVDVKLQNQEWKTY IDSRNTGNFDVIRASWVGDYNEPSTFLTLLTSTHSGNISRFNNPAYDKVLAQASTENTVK ARNADYNAAEKILMEQAPIAPIYQYTNGRLIKPWLKGYPINNPEDVAYSRTMYIVKH >gi|299856429|gb|ADWV01000022.1| GENE 15 16293 - 17192 245 299 aa, chain - ## HITS:1 COG:ycjZ KEGG:ns NR:ns ## COG: ycjZ COG0583 # Protein_GI_number: 16129289 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 299 1 299 299 566 99.0 1e-161 MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEERLGLRLLTRTTRSVVP TEAGEHLLSVLGPMLHDIDSALASLSELQNRPSGTIRITTVEHAAKTILLPAMRTFLKSH PEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRIGPDIPMAIVGSPDYFSRRSV PTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVRMEGQLLLNTIDLIIDAAIDGHG LAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYYPHRRHAGSAFSLFIDRLKYKGAV >gi|299856429|gb|ADWV01000022.1| GENE 16 17333 - 18250 1048 305 aa, chain + ## HITS:1 COG:ycjY KEGG:ns NR:ns ## COG: ycjY COG1073 # Protein_GI_number: 16129288 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli K12 # 1 305 6 310 310 581 98.0 1e-166 MNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVVSHPGGGVKEQTAGTYAKKLAEK GFVTIAYDASYQGESGGEPRQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAG YTANAAIQDRRIKAIGTVSAVNIGSMFRNGWENNVKSIDALPYVEAGSNARTSDISSGEY AVMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVYL TQPMQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPF FEETL >gi|299856429|gb|ADWV01000022.1| GENE 17 18250 - 19182 884 310 aa, chain + ## HITS:1 COG:Z2445 KEGG:ns NR:ns ## COG: Z2445 COG1073 # Protein_GI_number: 15801842 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Escherichia coli O157:H7 EDL933 # 114 309 11 207 207 394 98.0 1e-110 MKHIQIRNSDMAWHIAANIQFPPNFDESKQYPAIISVHPFGSCKEQTSGNIYGKALAEKG YLVLAYDASFQGESGGEPRWIEDPTQRVEDISRVIDYAVTLPYVNAERIGVLGVCGGGGY AINAALTEKRIKAVVSITGVNIGRLFREGFSNYDPIGALNAMASQRTKEARGGELQINEL LPASLDAAKSHGLTERDVYEATDYYKTPRGQQPGGATKMLFSHAQKTLAWDAFAFTEVLL TQPVMVVVGEKVGAFGAYRDGLEVYGRAMVSQDRQLVSLPDFSHYELYDKPEAVQEALEK VIPFFNTHLG >gi|299856429|gb|ADWV01000022.1| GENE 18 19188 - 19838 487 216 aa, chain + ## HITS:1 COG:ECs1906 KEGG:ns NR:ns ## COG: ECs1906 COG0702 # Protein_GI_number: 15831160 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 216 5 220 220 429 98.0 1e-120 MRNIMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLN HAALKQAMQGQDVVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGE WNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRK SVAALITDIIDKPEKHIGENIGINQPGTDGDKPFFM >gi|299856429|gb|ADWV01000022.1| GENE 19 20129 - 20857 326 242 aa, chain + ## HITS:1 COG:ECs1905 KEGG:ns NR:ns ## COG: ECs1905 COG2866 # Protein_GI_number: 15831159 # Func_class: E Amino acid transport and metabolism # Function: Predicted carboxypeptidase # Organism: Escherichia coli O157:H7 # 1 242 21 262 262 488 99.0 1e-138 MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLILAGTHGDENSSVVTLS CALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFPAANWKEGETVYRWNSAAE ERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPLACIEDPRHSELGEWLSQAFE LPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDEASEKYLFAMANLLRWHPKDAIR PS >gi|299856429|gb|ADWV01000022.1| GENE 20 20832 - 21797 906 321 aa, chain - ## HITS:1 COG:ycjG KEGG:ns NR:ns ## COG: ycjG COG4948 # Protein_GI_number: 16129286 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 321 15 335 335 589 99.0 1e-168 MRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELEEEGIKGTGECTPYPRYGESDASVMA QIMSVVPQLEKGLTREELQKILPAGAARNALDCALWDLAARKQQQSLADLIGITLPGTVI TAQTVVIGTPDQMANSASTLWQAGAKLLKVKLDNHLISERMVAIRTAVPDATLIVDANES WRAEGLAARCQLLADLGVAMLEQPLPAQDDAALENFIHPLPICADESCHTRSNLKALKGR YEMVNIKLDKTGGLTEALALATEARAQGFRLMLGCMLCTSRAISAALPLVPQVSFADLDG PTWLAVDVEPALQFTTGELHL >gi|299856429|gb|ADWV01000022.1| GENE 21 21916 - 22422 669 168 aa, chain + ## HITS:1 COG:ECs1903 KEGG:ns NR:ns ## COG: ECs1903 COG2077 # Protein_GI_number: 15831157 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 1 168 1 168 168 310 100.0 9e-85 MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGV CAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGV AIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA >gi|299856429|gb|ADWV01000022.1| GENE 22 22466 - 24007 1482 513 aa, chain - ## HITS:1 COG:tyrR KEGG:ns NR:ns ## COG: tyrR COG3283 # Protein_GI_number: 16129284 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulator of aromatic amino acids metabolism # Organism: Escherichia coli K12 # 1 513 1 513 513 1014 100.0 0 MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFAELEFESFSSLMAEIRR IAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKVDMANPASCQLFGQKLDRL RNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLMEITPVYLQDENDQHVLTGAVV MLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVEQAQKLAMLSAPLLITGDTGTGK DLFAYACHQASPRAGKPYLALNCASIPEDAVESELFGHAPEGKKGFFEQANGGSVLLDEI GEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKGMFREDLYYRL NVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLAADLNTVLTRYAWPGNVRQLK NAIYRALTQLDGYELRPQDILLPDYDAATVAVGEDAMEGSLDEITSRFERSVLTQLYRNY PSTRKLAKRLGVSHTAIANKLREYGLSQKKNEE >gi|299856429|gb|ADWV01000022.1| GENE 23 24155 - 25051 809 298 aa, chain - ## HITS:1 COG:ycjF KEGG:ns NR:ns ## COG: ycjF COG3768 # Protein_GI_number: 16129283 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 298 56 353 353 551 100.0 1e-157 MDAALRPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVALGGCAAGALIIGAG VGSVVTEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQQAGIDQSHPALQRWY ASIHETQNDREVVSLYAHLVQPVLDAQARREISRSAAESTLMIAVSPLALVDMAFIAWRN LRLINRIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVREVGMDWMSQDLAARLSTRA AQGIGAGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRRQLIGQVKETLQKGKTPSEK >gi|299856429|gb|ADWV01000022.1| GENE 24 25128 - 25217 142 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTEPLKPRIDFDGPLEVDQNPKIQGAADL >gi|299856429|gb|ADWV01000022.1| GENE 25 25214 - 26611 1219 465 aa, chain - ## HITS:1 COG:ECs1900 KEGG:ns NR:ns ## COG: ECs1900 COG3106 # Protein_GI_number: 15831154 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli O157:H7 # 1 465 1 465 465 961 99.0 0 MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVRE ERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRH FKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSVKWRMMCEGLDP LAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDAWG ESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFN DMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQD AWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARL PGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR >gi|299856429|gb|ADWV01000022.1| GENE 26 26766 - 27227 410 153 aa, chain + ## HITS:1 COG:ycjW KEGG:ns NR:ns ## COG: ycjW COG1609 # Protein_GI_number: 16129281 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 153 1 153 332 287 99.0 6e-78 MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVIRAIEELQYQPNKLARALTSSGF DAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQTSHNPAEDLQKCESKIKQK MIKGIIMLSSPADESFFAQLDKYDIPVVVIGKV >gi|299856429|gb|ADWV01000022.1| GENE 27 27285 - 27764 385 159 aa, chain + ## HITS:1 COG:ycjW KEGG:ns NR:ns ## COG: ycjW COG1609 # Protein_GI_number: 16129281 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 159 174 332 332 309 97.0 2e-84 MTDALIESGHQNIACLHAPLDVHVSVDRVNGYKQSLAAHNIAVRDEWIVDGGYTHETALQ AARELLSQSPLPEAVFATDSLKLMSIYRAAAEKNIAIPQQLAVVGYSNETLSFILTPAPG GIDIPTQELGQQSCELLFRLISGKPSPQNITVATHMTLK >gi|299856429|gb|ADWV01000022.1| GENE 28 27875 - 28780 1059 301 aa, chain - ## HITS:1 COG:no KEGG:B21_01307 NR:ns ## KEGG: B21_01307 # Name: ompG # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 301 1 301 301 596 100.0 1e-169 MKKLLPCTALVMCAGMACAQAEERNDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAA NGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYV DEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANDLNTTGYADTRVETETGLQY TFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSN WDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYS F >gi|299856429|gb|ADWV01000022.1| GENE 29 28825 - 29907 1181 360 aa, chain - ## HITS:1 COG:ECs1897 KEGG:ns NR:ns ## COG: ECs1897 COG3839 # Protein_GI_number: 15831151 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Escherichia coli O157:H7 # 1 360 1 360 360 713 99.0 0 MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGD LLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQ ILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKL HQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVAGFIGSPAM NFIRGTIDGDKFVTETLKLTIPEEKLAVLKTQGSLHKPIVMGIRPEDIHPDAQEENNISA KISVAELTGAEFMLYTTVGGHELVVRAGALNDYHAGENITIHFDMTKCHFFDAETEIAIR >gi|299856429|gb|ADWV01000022.1| GENE 30 29921 - 30580 565 219 aa, chain - ## HITS:1 COG:ECs1896 KEGG:ns NR:ns ## COG: ECs1896 COG0637 # Protein_GI_number: 15831150 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Escherichia coli O157:H7 # 1 219 1 219 219 418 97.0 1e-117 MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHG GKEGDFNSQERAQLAYRKNLLYVHSLRELTVSAVLPGIRSLLADLRAQQIPVGLASVSLN APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI NASGMRSVGIGAGLTGAQLLLPSTDSLTWSRLSAFWQNV >gi|299856429|gb|ADWV01000022.1| GENE 31 30577 - 32775 1543 732 aa, chain - ## HITS:1 COG:ECs1895 KEGG:ns NR:ns ## COG: ECs1895 COG1554 # Protein_GI_number: 15831149 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose and maltose hydrolases (possible phosphorylases) # Organism: Escherichia coli O157:H7 # 1 732 24 755 755 1458 97.0 0 MAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINELVNLPDVVGMEIAINGEVF SLSREAWQRELDFASGELRRSVVWRTSNGTGYTIASRRFVSADQLPLIVLEITITPLDAD ASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCMVSGDVQ QCYTAKERRLQQHTSAQLHAGETVTLQKLVWIDWRDDRQAVLDEWGSASLRQLEMCAQQS YDQLLAVSTENWRQWWQKRRITVNGGEAHDQQALDYALYHLRIMTPAHDERSSIAAKGLT GEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWES ARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMA LLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNNNAFTSYMAYYNVQQALSIARQFG CSDDAFIHRAEMFLKELRLPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLDYSR AEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCG LLTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPAL PEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLRLNGQLISVAEKSVFCLGDFILP FNGTATTHQEDE >gi|299856429|gb|ADWV01000022.1| GENE 32 32841 - 33884 830 347 aa, chain - ## HITS:1 COG:ycjS KEGG:ns NR:ns ## COG: ycjS COG0673 # Protein_GI_number: 16129276 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli K12 # 1 347 5 351 351 728 99.0 0 MTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDP QAMLLAVKPDVVSVCSPNRFHYEHTLIALEAGCHVMCEKPPAMTPEQAREMCDTARKLGK VLAYDFHHRFALDTQQLRDQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGGGPLI DIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFH NGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREMADDNR HLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL >gi|299856429|gb|ADWV01000022.1| GENE 33 33906 - 34694 990 262 aa, chain - ## HITS:1 COG:ycjR KEGG:ns NR:ns ## COG: ycjR COG1082 # Protein_GI_number: 16129275 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Escherichia coli K12 # 1 262 4 265 265 545 99.0 1e-155 MKIGTQNQAFFPENILEKFRYIKEMGFDGFEIDGKLLVNNLEEVKAAIKETGLPVTTACG GYDGWIGDFIEERRLNGLKQIERILEALAEVGGKGIVVPAAWGMFTFRLPPMTSPRSLDG DRKMVSDSLRVLEQVAARTGTVVYLEPLNRYQDHMINTLADARRYIVENDLKHVQIIGDF YHMNIEEDNLAQALHDNRDLLGHVHIADNHRYQPGSGTLDFHALFEQLRADNYQGYVVYE GRIRAEDPAQAYRDSLAWLRTC >gi|299856429|gb|ADWV01000022.1| GENE 34 34712 - 35764 1226 350 aa, chain - ## HITS:1 COG:ycjQ KEGG:ns NR:ns ## COG: ycjQ COG1063 # Protein_GI_number: 16129274 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 350 1 350 350 697 99.0 0 MKKLVATAPRVAALVEYEDRAILANEVKIRVRFGAPKHGTEVVDFRAASPFIDEDFNGEW QMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVTDYAVGDSVCGYGPLSETVIINAV NNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDFVVVVGLGAIGQIAIQLAKRA GASVVIGVDPIAYRCDIARRHGADFCLNPIGTDVGKEIKTLTGKQGADVIIETSGYADAL QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRI EETCWELLMNGYLNCEDLIDPVVTFANSPESYMQYVDQHPEQSIKMGVTF >gi|299856429|gb|ADWV01000022.1| GENE 35 35795 - 36637 939 280 aa, chain - ## HITS:1 COG:ycjP KEGG:ns NR:ns ## COG: ycjP COG0395 # Protein_GI_number: 16129273 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Escherichia coli K12 # 1 280 1 280 280 462 100.0 1e-130 MATNKRTLSRIGFYCGLALFLIITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYV DIFNPMIFPFVDYFRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMF SGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDG LNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTP DYIWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVKG >gi|299856429|gb|ADWV01000022.1| GENE 36 36624 - 37505 1006 293 aa, chain - ## HITS:1 COG:ycjO KEGG:ns NR:ns ## COG: ycjO COG1175 # Protein_GI_number: 16129272 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Escherichia coli K12 # 1 293 1 293 293 486 99.0 1e-137 MNRLFSGRSDMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNY VRILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFHLRKTARSLVILSYVTPS ISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFI SFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYL LTTKVDILGVYLYKTAFAFNDLGKAAAISVVLFIIIFAVILLTRKRVNLNGNK >gi|299856429|gb|ADWV01000022.1| GENE 37 37526 - 38818 1594 430 aa, chain - ## HITS:1 COG:ycjN KEGG:ns NR:ns ## COG: ycjN COG1653 # Protein_GI_number: 16129271 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 430 1 430 430 815 99.0 0 MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQAVISKLIARFEKENPGI TVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKAVATVISNVGEG AFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLND PANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRDLAAN TMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTS LTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKA LGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLPGTLQASQ KKLDELIEQH >gi|299856429|gb|ADWV01000022.1| GENE 38 38832 - 40136 852 434 aa, chain - ## HITS:1 COG:ycjM KEGG:ns NR:ns ## COG: ycjM COG0366 # Protein_GI_number: 16129270 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 434 135 568 568 905 99.0 0 MFDFVCNHMSAKSEWFKNYLQQHPGFEDFFIAVDPQTDLSAVTRPRALPLLTPFQMRDHS TRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYLAKGAEYVRLDAVGFMWKEPGTSCIHL EKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGAGDDEAHMVYQFSLPPLVLHA VQKQNVEALCAWAQNLTLPSSNTTWFNFLASHDGIGLNPLRGLLPESEILELVEALQQEG ALVNWKNNPDGTRSPYEINVTYMDALSRRESSDEERCARFILAHAILLSFPGVPAIYIQS ILGSRNDYAGVEKLGYNRAINRKKYHSKEITRELNDEATLRHAVYHELSRLITLRRSHNE FHPDNNFTIDTINSSVMRIQRSNADGNCLTGLFNVSKNIQHVNITNLHGRDLISEVDILG NEITLRPWQVMWIK >gi|299856429|gb|ADWV01000022.1| GENE 39 40170 - 40538 271 122 aa, chain - ## HITS:1 COG:ycjM KEGG:ns NR:ns ## COG: ycjM COG0366 # Protein_GI_number: 16129270 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Escherichia coli K12 # 1 122 1 122 568 258 99.0 2e-69 MGPLPRKGNMKQKITDYLDEIYGGTFTATHLQKLVTRLESAKRLITQRRKKHWDESDVVL ITYADQFHSNDLKPLPTFNQFYHQWLQSIFSHVHLLPFYPWSSDDGFSVIDYQQVASEAG EW >gi|299856429|gb|ADWV01000022.1| GENE 40 40723 - 41037 442 104 aa, chain - ## HITS:1 COG:pspE KEGG:ns NR:ns ## COG: pspE COG0607 # Protein_GI_number: 16129269 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Escherichia coli K12 # 1 104 1 104 104 206 100.0 1e-53 MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATAVPDKN DTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKVKG >gi|299856429|gb|ADWV01000022.1| GENE 41 41112 - 41333 267 73 aa, chain - ## HITS:1 COG:no KEGG:S1394 NR:ns ## KEGG: S1394 # Name: pspD # Def: peripheral inner membrane phage-shock protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 73 1 73 73 109 100.0 4e-23 MNTRWQQAGQKVKLGFKLAGKLVLLTALRYGPAGVAGWAIKSVARRPLKMLLAVALEPLL SRAANKLAQRYKR >gi|299856429|gb|ADWV01000022.1| GENE 42 41342 - 41701 535 119 aa, chain - ## HITS:1 COG:ECs1883 KEGG:ns NR:ns ## COG: ECs1883 COG1983 # Protein_GI_number: 15831137 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 119 1 119 119 228 100.0 3e-60 MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLALFTLVAYIIL SFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREMERYVTSDTFTLRSRFRQL >gi|299856429|gb|ADWV01000022.1| GENE 43 41701 - 41925 318 74 aa, chain - ## HITS:1 COG:no KEGG:ECDH10B_1422 NR:ns ## KEGG: ECDH10B_1422 # Name: pspB # Def: phage shock protein B # Organism: E.coli_DH10B # Pathway: not_defined # 1 74 1 74 74 127 100.0 9e-29 MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLAQLADEAKRMRERIQAL ESILDAEHPNWRDR >gi|299856429|gb|ADWV01000022.1| GENE 44 41979 - 42647 1013 222 aa, chain - ## HITS:1 COG:ECs1881 KEGG:ns NR:ns ## COG: ECs1881 COG1842 # Protein_GI_number: 15831135 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Phage shock protein A (IM30), suppresses sigma54-dependent transcription # Organism: Escherichia coli O157:H7 # 1 222 1 222 222 280 100.0 2e-75 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRR IEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKK EIGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMARFESFERRIDQMEA EAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMKQDNQ >gi|299856429|gb|ADWV01000022.1| GENE 45 42814 - 43791 932 325 aa, chain + ## HITS:1 COG:ECs1880 KEGG:ns NR:ns ## COG: ECs1880 COG1221 # Protein_GI_number: 15831134 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 325 6 330 330 641 100.0 0 MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPF ISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKL LRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLR ERESDIMLMAEHFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRH GTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLPLDLREFQMQQEKELLQLSLQQGKY NQKRAAELLGLTYHQFRALLKKHQI >gi|299856429|gb|ADWV01000022.1| GENE 46 43911 - 45176 1225 421 aa, chain - ## HITS:1 COG:goaG KEGG:ns NR:ns ## COG: goaG COG0160 # Protein_GI_number: 16129263 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Escherichia coli K12 # 1 421 1 421 421 796 99.0 0 MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPD LVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKI ARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQ DSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEV QSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGN PLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFND PQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS D >gi|299856429|gb|ADWV01000022.1| GENE 47 45214 - 46494 1449 426 aa, chain - ## HITS:1 COG:ordL KEGG:ns NR:ns ## COG: ordL COG0665 # Protein_GI_number: 16129262 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli K12 # 1 426 1 426 426 871 100.0 0 MTEHTSSYYAASANKYAPFDTLNESITCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASR IGFGASGRNGGQLVNSYSRDIDVIEKSYGMDTARMLGSMMFEGGEIIRERIKRYQIDCDY RPGGLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAIRREVASDRYTGALLDHSGGH IHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVVRTAKGQVTAKYVIVAGNAYLGD KVEPELAKRSMPCGTQVITTERLSEDLARSLIPKNYCVEDCNYLLDYYRLTADNRLLYGG GVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDYRWTGNFLLTLSRMPQFGRLDTNIYYM QGYSGHGVTCTHLAGRLIAELLRGDAERFDAFANLPHYPFPGGRTLRVPFTAMGAAYYSL RDRLGV >gi|299856429|gb|ADWV01000022.1| GENE 48 46496 - 47983 1665 495 aa, chain - ## HITS:1 COG:aldH KEGG:ns NR:ns ## COG: aldH COG1012 # Protein_GI_number: 16129261 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 495 1 495 495 971 98.0 0 MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDID RAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDD IPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGP ALAAGNSVVLKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAI AFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANLVFADCPDLQKAASATAAGIFYNQGQ VCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREG ESKGQLLLDGRNAELAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEDQALQLAND SQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHAL EKFTELKTIWISLEA >gi|299856429|gb|ADWV01000022.1| GENE 49 48258 - 48815 507 185 aa, chain - ## HITS:1 COG:ycjC KEGG:ns NR:ns ## COG: ycjC COG1396 # Protein_GI_number: 16129260 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 185 1 185 185 344 100.0 5e-95 MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT GERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH TPTTF >gi|299856429|gb|ADWV01000022.1| GENE 50 48842 - 49594 302 250 aa, chain - ## HITS:1 COG:ycjL KEGG:ns NR:ns ## COG: ycjL COG2071 # Protein_GI_number: 16129259 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Escherichia coli K12 # 1 250 9 258 258 488 99.0 1e-138 MNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIALPHALAEPSLLEQLLPKLDG IYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMALINAALERRIPIFAICRGLQELVVAT GGSLHRKLCEQPELLEHREDPELPVEQQYAPSHEVQVEEGGLLSALLPECSNFWVNSLHG QGAKVVSPRLRVEARSPDGLVEAVSVINHPFALGVQWHPEWNSSEYALSRILFEGFITAC QHHIAEKQRL >gi|299856429|gb|ADWV01000022.1| GENE 51 49818 - 51236 1185 472 aa, chain + ## HITS:1 COG:ECs1874 KEGG:ns NR:ns ## COG: ECs1874 COG0174 # Protein_GI_number: 15831128 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Escherichia coli O157:H7 # 1 472 27 498 498 972 100.0 0 METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSS LKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQM LLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCA PGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN VLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDTE GEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPC GDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQ SDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA >gi|299856429|gb|ADWV01000022.1| GENE 52 51539 - 52924 1537 461 aa, chain + ## HITS:1 COG:ECs1873 KEGG:ns NR:ns ## COG: ECs1873 COG0531 # Protein_GI_number: 15831127 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 1 461 19 479 479 860 99.0 0 MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYL LALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLL AKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFLVVQ GLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPK AIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAALPEIALYVGGKLFQSIFLCTTFVN TLASGLASHASVSRLLYVMGRDNVFPERVFGYVHPKWRTPALNVIMVGIVALSALFFDLV TATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKDHFHYLLMPLVGALTVGVLWVNLE STSLTLGLVWASLGGAYLWYLIRRYRKVPLYEGDRTPVSET >gi|299856429|gb|ADWV01000022.1| GENE 53 53058 - 53303 305 81 aa, chain + ## HITS:1 COG:no KEGG:Z2493 NR:ns ## KEGG: Z2493 # Name: ymjA # Def: hypothetical protein # Organism: E.coli_O157 # Pathway: not_defined # 1 81 1 81 81 141 98.0 9e-33 MNHDIPLKYFDIADEYATECAEPVAEAERTPLAHYFQLLLTRLMNNEEISEEAQHEMAAE AGINPVRIDEIAEFLNQWGNE >gi|299856429|gb|ADWV01000022.1| GENE 54 53616 - 55259 1455 547 aa, chain + ## HITS:1 COG:sapA KEGG:ns NR:ns ## COG: sapA COG4166 # Protein_GI_number: 16129255 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 547 1 547 547 1076 100.0 0 MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQVNTFNPSKASSGLIVDT LAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRRDVPFQKTDWFTPTRKMNA DDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSVRKLDNHTVEFRLAQPDASFL WHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPYQLSEYRAGQFIRLQRHDDFWRG KPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAASQLSILRDDPRLRLTLRPGMNVAYL AFNTAKPPLNNPAVRHALALAINNQRLMQSIYYGTAETAASILPRASWAYDNEAKITEYN PAKSREQLKSLGLENLTLKLWVPTRSQAWNPSPLKTAELIQADMAQVGVKVVIVPVEGRF QEARLMDMSHDLTLSGWATDSNDPDSFFRPLLSCAAIHSQTNLAHWCDPKFDSVLRKALS SQQLAARIEAYDEAQSILAQELPILPLASSLRLQAYRYDIKGLVLSPFGNASFAGVYREK QDEVKKP >gi|299856429|gb|ADWV01000022.1| GENE 55 55256 - 56221 588 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 1 318 1 317 320 231 35 1e-59 MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAWVFWFNGLIHWDFGVSS INGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGITRHKWQDNLINAIALLGFS IPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFALIDAWLSDSPWRDEMIMSAI RHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAAATRGLSRFTILRRHVLHNALPP VIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAIRQQDYAAISAGVMVCGSLVIIVNV ISDILGAMANPLKHKEWYALR >gi|299856429|gb|ADWV01000022.1| GENE 56 56208 - 57098 915 296 aa, chain + ## HITS:1 COG:sapC KEGG:ns NR:ns ## COG: sapC COG4171 # Protein_GI_number: 16129253 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Escherichia coli K12 # 1 296 1 296 296 535 100.0 1e-152 MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLG YQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFA GATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSM VHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLG AQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAIIAGVE >gi|299856429|gb|ADWV01000022.1| GENE 57 57098 - 58090 468 330 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 14 321 31 324 329 184 37 1e-45 MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDN WRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWT YKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLL IADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQTVET APSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGPRCPY AQRECIVTPRLTGAKNHLYACHFPLNMEKE >gi|299856429|gb|ADWV01000022.1| GENE 58 58080 - 58898 448 272 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 256 3 263 329 177 35 2e-43 RKSEMIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTL AKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLNPRQRISQILDFPLR LNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLGLARALILRPKVIIADE ALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQVLVMHQGEVVERGSTA DVLASPLHELTKRLIAGHFGEALTADAWRKDR >gi|299856429|gb|ADWV01000022.1| GENE 59 58969 - 59319 116 116 aa, chain + ## HITS:1 COG:ycjD KEGG:ns NR:ns ## COG: ycjD COG2852 # Protein_GI_number: 16129250 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 116 2 117 117 217 97.0 4e-57 MDKIKSNARDLRSNLTLQERKLWRYLRSRRFGDFKFRRQHPVGSYILDFACCSARVVVEL DGGQHDLAVAYDSRRTSWLESQGWTVLRFWNNEIDCNEETVLENILQELNRRSPSP >gi|299856429|gb|ADWV01000022.1| GENE 60 59689 - 60477 1027 262 aa, chain + ## HITS:1 COG:ECs1861 KEGG:ns NR:ns ## COG: ECs1861 COG0623 # Protein_GI_number: 15831115 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Escherichia coli O157:H7 # 1 262 1 262 262 506 100.0 1e-143 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDIS SYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE GVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI SGEVVHVDGGFSIAAMNELELK >gi|299856429|gb|ADWV01000022.1| GENE 61 60622 - 61749 332 375 aa, chain + ## HITS:1 COG:yciW_1 KEGG:ns NR:ns ## COG: yciW_1 COG4950 # Protein_GI_number: 16129248 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 210 27 236 236 405 95.0 1e-113 MEQRHITGKSHWYHETQSSTAEYDVLPLVPEAAKVSDPFLLDVILDEETLAPFLSWLVPA RVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSSRE SNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAGDCVIINQIIGFIGFQARTIATF QAYLGHPVRWLPGLEIQNYADASLFADESIRWRSSYEVEKLPEEYTKSSTAELCQLAETL SLHPISLSLLERLLNSTRVNTQPDNKLAALLCARINGSPACFAACMDSSNEYKKISPLLR KGENEINQWADRHSVEHATVQAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGL CGWINRLKIALGETY >gi|299856429|gb|ADWV01000022.1| GENE 62 61817 - 63751 2125 644 aa, chain + ## HITS:1 COG:ECs1859 KEGG:ns NR:ns ## COG: ECs1859 COG4776 # Protein_GI_number: 15831113 # Func_class: K Transcription # Function: Exoribonuclease II # Organism: Escherichia coli O157:H7 # 1 644 1 644 644 1280 99.0 0 MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI IAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPDHPLLKDAIPCRAARGLNH EFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT EMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALPDDKLQLIVAIADPTAWIAEGSK LDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGTIEDNIEF FAATIESKAKLVYDQVSDWLENTGDWQPESEAIAEQVRLLAQICQRRGEWRHNHALVFKD RPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGIYNVHMGFD PANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRM AERDVGDWLYARFLKDKAGTDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAMRDE LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA >gi|299856429|gb|ADWV01000022.1| GENE 63 63987 - 65972 1209 661 aa, chain + ## HITS:1 COG:yciR_3 KEGG:ns NR:ns ## COG: yciR_3 COG2200 # Protein_GI_number: 16129246 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 401 661 1 261 261 529 100.0 1e-150 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG NAYEVELWIPTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD SITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR A >gi|299856429|gb|ADWV01000022.1| GENE 64 66119 - 66292 222 57 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1446 NR:ns ## KEGG: EC55989_1446 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 57 15 71 71 105 100.0 4e-22 MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVAESTPDIPKAPWEI >gi|299856429|gb|ADWV01000022.1| GENE 65 66382 - 67131 637 249 aa, chain + ## HITS:1 COG:ECs1857 KEGG:ns NR:ns ## COG: ECs1857 COG1349 # Protein_GI_number: 15831111 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 249 1 249 249 478 99.0 1e-135 MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKLSYLRRAHGFAVSLDSD DVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSSY IAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVYFSKAFIGIDGWQPETGFTGRD MMRTDVVNAVLEKECEAIVLTDSSKFGAVHSYSIGPVERFNRVITDSKIRASDLMHLEHS KLTVHVVDI >gi|299856429|gb|ADWV01000022.1| GENE 66 67400 - 67618 376 72 aa, chain + ## HITS:1 COG:no KEGG:G2583_1624 NR:ns ## KEGG: G2583_1624 # Name: osmB # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 72 1 72 72 74 100.0 1e-12 MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGA AVGGVIGHQVGK >gi|299856429|gb|ADWV01000022.1| GENE 67 67744 - 68070 477 108 aa, chain - ## HITS:1 COG:yciH KEGG:ns NR:ns ## COG: yciH COG0023 # Protein_GI_number: 16129243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 1 (eIF-1/SUI1) and related proteins # Organism: Escherichia coli K12 # 1 108 2 109 109 177 100.0 5e-45 MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKGKGVCLITGVDLDDAEL TKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG >gi|299856429|gb|ADWV01000022.1| GENE 68 68070 - 68807 639 245 aa, chain - ## HITS:1 COG:pyrF KEGG:ns NR:ns ## COG: pyrF COG0284 # Protein_GI_number: 16129242 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Escherichia coli K12 # 1 245 1 245 245 454 99.0 1e-128 MTLTASSSSRAVTNSPVVVALDYHNRDDALSFVDKIDPRDCRLKVGKEMFTLFGPQFVRE LQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKD APLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVF GQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINAS LQRSA >gi|299856429|gb|ADWV01000022.1| GENE 69 69000 - 70169 1278 389 aa, chain - ## HITS:1 COG:ECs1853 KEGG:ns NR:ns ## COG: ECs1853 COG2956 # Protein_GI_number: 15831107 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosaminyl transferase # Organism: Escherichia coli O157:H7 # 10 389 10 389 389 721 100.0 0 MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVNFLLSNQQDKAVDLFLD MLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYEQRLLAIQQLGRDYMAA GLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKAIDVAERLVKLGKDKQRVEIA HFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQRV ISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAVEENTGADAELMLADIIEARDGSEA AQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRAKESLMVLRDMVGEKVRSKPRYRCQKC GFTAYTLYWHCPSCRAWSTIKPIRGLDGL >gi|299856429|gb|ADWV01000022.1| GENE 70 70176 - 70484 201 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133578|ref|ZP_00203203.1| COG3771: Predicted membrane protein [Haemophilus influenzae R2866] # 1 89 2 90 97 82 35 9e-15 MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTLLAVLFAAGFAIGWLIC GLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE >gi|299856429|gb|ADWV01000022.1| GENE 71 70633 - 71397 480 254 aa, chain - ## HITS:1 COG:ECs1851 KEGG:ns NR:ns ## COG: ECs1851 COG0671 # Protein_GI_number: 15831105 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 # 1 254 1 254 254 446 100.0 1e-125 MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLIL FGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDE FYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWP RRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPP AEENREIAQREQES >gi|299856429|gb|ADWV01000022.1| GENE 72 71567 - 72157 681 196 aa, chain + ## HITS:1 COG:ECs1850 KEGG:ns NR:ns ## COG: ECs1850 COG0807 # Protein_GI_number: 15831104 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 403 100.0 1e-112 MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDAL FSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQ LGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNE HYLDTKAEKMGHLLNK >gi|299856429|gb|ADWV01000022.1| GENE 73 72221 - 74896 2494 891 aa, chain - ## HITS:1 COG:acnA KEGG:ns NR:ns ## COG: acnA COG1048 # Protein_GI_number: 16129237 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Escherichia coli K12 # 1 891 1 891 891 1791 99.0 0 MSSTLREASKDTLQAKDKTYHYYSLPLAAKSLGDITRLPKSLKVLLENLLRWQDGNSVTE EDIHALAGWLKNAHADREIAYRPARVLMQDFTGVPAVVDLAAMREAVKRLGGDTAKVNPL SPVDLVIDHSVTVDRFGDDEAFEENVRLEMERNHERYVFLKWGKQAFSRFSVVPPGTGIC HQVNLEYLGKAVWSELQDGEWIAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQ PVSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADR ATIANMSPEYGATCGFFPIDAVTLDYMRLSGRSEDQVELVEKYAKAQGMWRNPGDEPIFT STLELDMNDVEASLAGPKRPQDRVALPDVPKAFAASNELEVNATHKDRQPVDYVMNGHQY QLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYL AKAKLTPYLDELGFNLVGYGCTTCIGNSGPLPDPIETAIKKGDLTVGAVLSGNRNFEGRI HPLVKTNWLASPPLVVAYALAGNMNINLAAEPIGHDRKGDPVYLKDIWPSAQEIARAVEQ VSTEMFRKEYAEVFEGTAEWKEINVTRSDTYGWQEDSTYIRLSPFFDEMQATPAPVEDIH GARILAMLGDSVTTDHISPAGSIKPDSPAGRYLQGRGVERKDFNSYGSRRGNHEVMMRGT FANIRIRNEMVPGVEGGMTRHLPDSDVVSIYDAAMRYKQEQTPLAVIAGKEYGSGSSRDW AAKGPRLLGIRVVIAESFERIHRSNLIGMGILPLEFPQGVTRKTLELTGEEKIDIGDLQN LQPGATVPVTLTRADGSQEVVPCRCRIDTATELTYYQNDGILHYVIRNMLK >gi|299856429|gb|ADWV01000022.1| GENE 74 75269 - 75436 116 55 aa, chain - ## HITS:1 COG:no KEGG:SSON_1865 NR:ns ## KEGG: SSON_1865 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 55 5 59 59 80 100.0 1e-14 MVGQEQLESSPLCQHSDNETETKRECSVVIPDDWQLTSQQQAFIELFAEDDQPKQ >gi|299856429|gb|ADWV01000022.1| GENE 75 75439 - 75567 87 42 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1434 NR:ns ## KEGG: EC55989_1434 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 42 13 54 54 73 100.0 2e-12 MPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG >gi|299856429|gb|ADWV01000022.1| GENE 76 75898 - 76872 829 324 aa, chain - ## HITS:1 COG:ECs1847 KEGG:ns NR:ns ## COG: ECs1847 COG0583 # Protein_GI_number: 15831101 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 324 1 324 324 647 100.0 0 MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVT PAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYP RVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAG KKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGV GVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV DAAVALRSNEEIEVMFKDIKLPEK >gi|299856429|gb|ADWV01000022.1| GENE 77 77082 - 79679 2806 865 aa, chain - ## HITS:1 COG:topA_1 KEGG:ns NR:ns ## COG: topA_1 COG0550 # Protein_GI_number: 16129235 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Escherichia coli K12 # 1 592 1 592 592 1165 99.0 0 MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPK KDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA WHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNIDRVNAQQARRFMDRVVGYMVS PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDASTTTPSGEALALQVTH QNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPTTSKPGAPFITSTLQQAASTRLGFG VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESPNQYASKEN SQEAHEAIRPSDVNVMAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSATLTVGAGDF RLKARGRILRFDGWTKVMPALRKGDEDRILPAVNKGDALTLVELTPAQHFTKPPARFSEA SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY DFTAQMENSLDQVANHEAEWKAVLDHFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGEDAETNALRAKR RCPKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL KMGRFGKYMACTNEECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYV SSEKDGKATGWSAFYVDGKWVEGKK >gi|299856429|gb|ADWV01000022.1| GENE 78 80059 - 80212 239 51 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_1292 NR:ns ## KEGG: ECIAI1_1292 # Name: yciN # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 51 1 51 83 98 100.0 7e-20 MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFL Prediction of potential genes in microbial genomes Time: Sun May 15 15:45:04 2011 Seq name: gi|299856428|gb|ADWV01000023.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont22.1, whole genome shotgun sequence Length of sequence - 69700 bp Number of predicted genes - 64, with homology - 64 Number of transcription units - 37, operones - 15 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 2 Op 1 . + CDS 1513 - 2769 471 ## COG2195 Di- and tripeptidases 3 2 Op 2 . + CDS 2766 - 4127 912 ## COG3069 C4-dicarboxylate transporter + Term 4148 - 4181 -0.5 4 3 Tu 1 . + CDS 4773 - 5219 297 ## COG3344 Retron-type reverse transcriptase 5 4 Op 1 6/0.000 + CDS 5727 - 6152 203 ## COG2963 Transposase and inactivated derivatives 6 4 Op 2 5/0.000 + CDS 6149 - 6499 314 ## COG3436 Transposase and inactivated derivatives 7 4 Op 3 . + CDS 6530 - 8143 863 ## COG3436 Transposase and inactivated derivatives + Prom 8148 - 8207 5.8 8 5 Tu 1 . + CDS 8310 - 9314 372 ## COG1446 Asparaginase + Term 9343 - 9383 -0.2 - Term 9604 - 9633 -0.5 9 6 Tu 1 . - CDS 9652 - 9930 284 ## EcSMS35_1110 hypothetical protein - Prom 10172 - 10231 10.4 + Prom 10584 - 10643 80.4 10 7 Tu 1 . + CDS 10682 - 10798 76 ## COG3328 Transposase and inactivated derivatives + Prom 11134 - 11193 80.4 11 8 Op 1 . + CDS 11243 - 12136 560 ## COG3328 Transposase and inactivated derivatives 12 8 Op 2 . + CDS 12437 - 12790 238 ## E2348C_1549 transposase of ISEc13 - Term 12838 - 12871 2.1 13 9 Op 1 . - CDS 12947 - 13660 295 ## PROTEIN SUPPORTED gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 14 9 Op 2 . - CDS 13724 - 14758 681 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase 15 9 Op 3 4/0.200 - CDS 14718 - 15749 543 ## COG1609 Transcriptional regulators 16 10 Tu 1 . - CDS 15854 - 17248 1092 ## COG0477 Permeases of the major facilitator superfamily - Prom 17338 - 17397 2.9 + Prom 18079 - 18138 5.1 17 11 Tu 1 . + CDS 18197 - 18418 211 ## COG2963 Transposase and inactivated derivatives - Term 18304 - 18356 8.8 18 12 Tu 1 . - CDS 18500 - 18634 108 ## EcSMS35_1102 hypothetical protein - Prom 18667 - 18726 4.2 19 13 Op 1 23/0.000 - CDS 18854 - 19507 182 ## COG2801 Transposase and inactivated derivatives 20 13 Op 2 . - CDS 19720 - 20031 223 ## COG2963 Transposase and inactivated derivatives - Prom 20110 - 20169 6.6 21 14 Tu 1 . - CDS 20294 - 20509 60 ## EcSMS35_1099 hypothetical protein - Prom 20674 - 20733 4.0 22 15 Tu 1 . + CDS 20578 - 20910 128 ## COG3436 Transposase and inactivated derivatives + Prom 21072 - 21131 8.8 23 16 Op 1 1/0.400 + CDS 21263 - 21952 640 ## COG2186 Transcriptional regulators 24 16 Op 2 2/0.300 + CDS 21949 - 22827 593 ## COG3734 2-keto-3-deoxy-galactonokinase 25 16 Op 3 1/0.400 + CDS 22811 - 23428 579 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 26 16 Op 4 7/0.000 + CDS 23425 - 24573 1523 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 27 16 Op 5 . + CDS 24693 - 25244 268 ## COG0477 Permeases of the major facilitator superfamily 28 17 Tu 1 . - CDS 25337 - 25549 83 ## COG1943 Transposase and inactivated derivatives - Prom 25715 - 25774 2.9 29 18 Tu 1 . - CDS 26368 - 27267 385 ## COG0583 Transcriptional regulator - Prom 27293 - 27352 5.2 + Prom 27500 - 27559 5.0 30 19 Op 1 . + CDS 27607 - 28326 519 ## COG1794 Aspartate racemase 31 19 Op 2 4/0.200 + CDS 28385 - 29683 1083 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 29773 - 29806 4.4 + Prom 29820 - 29879 4.5 32 20 Tu 1 . + CDS 29906 - 31306 700 ## COG1027 Aspartate ammonia-lyase + Term 31333 - 31392 4.2 33 21 Tu 1 . + CDS 31462 - 32796 823 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 32976 - 33019 -0.9 + Prom 33171 - 33230 2.8 34 22 Tu 1 . + CDS 33284 - 34330 1289 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D + Term 34338 - 34370 5.4 35 23 Tu 1 . - CDS 34924 - 35649 252 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 - Prom 35783 - 35842 9.5 36 24 Tu 1 . - CDS 36627 - 37283 347 ## COG2186 Transcriptional regulators - Prom 37330 - 37389 10.8 + Prom 37327 - 37386 8.5 37 25 Op 1 . + CDS 37441 - 37941 61 ## COG2704 Anaerobic C4-dicarboxylate transporter 38 25 Op 2 8/0.000 + CDS 37841 - 38770 579 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 39 25 Op 3 2/0.300 + CDS 38809 - 40188 578 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 40 25 Op 4 . + CDS 40199 - 40510 368 ## COG1447 Phosphotransferase system cellobiose-specific component IIA + Prom 40635 - 40694 3.3 41 26 Op 1 23/0.000 + CDS 40806 - 41117 166 ## COG2963 Transposase and inactivated derivatives 42 26 Op 2 . + CDS 41303 - 41980 182 ## COG2801 Transposase and inactivated derivatives + Term 42006 - 42057 3.5 - Term 41949 - 41984 0.1 43 27 Tu 1 . - CDS 42045 - 43031 150 ## COG2801 Transposase and inactivated derivatives - Prom 43133 - 43192 4.1 + Prom 43293 - 43352 3.8 44 28 Op 1 . + CDS 43457 - 44467 726 ## COG1609 Transcriptional regulators 45 28 Op 2 . + CDS 44561 - 46687 1733 ## COG3345 Alpha-galactosidase 46 28 Op 3 . + CDS 46742 - 46966 104 ## EcE24377A_3381 galactoside permease 47 28 Op 4 . + CDS 46978 - 48018 938 ## COG0477 Permeases of the major facilitator superfamily 48 28 Op 5 . + CDS 48015 - 49445 965 ## COG1621 Beta-fructosidases (levanase/invertase) + Term 49456 - 49487 4.5 49 29 Op 1 . + CDS 49509 - 50024 474 ## COG2190 Phosphotransferase system IIA components 50 29 Op 2 . + CDS 50030 - 50233 70 ## PMI2586 hypothetical protein 51 30 Op 1 . + CDS 50406 - 50606 151 ## gi|300819076|ref|ZP_07099279.1| conserved domain protein 52 30 Op 2 . + CDS 50636 - 51562 473 ## COG0524 Sugar kinases, ribokinase family 53 30 Op 3 . + CDS 51662 - 53158 1298 ## COG4580 Maltoporin (phage lambda and maltose receptor) + Prom 54112 - 54171 80.4 54 31 Op 1 23/0.000 + CDS 54241 - 54567 347 ## COG2963 Transposase and inactivated derivatives 55 31 Op 2 . + CDS 54567 - 55046 198 ## COG2801 Transposase and inactivated derivatives 56 32 Tu 1 . + CDS 55653 - 57161 454 ## COG3344 Retron-type reverse transcriptase 57 33 Op 1 1/0.400 + CDS 57326 - 57703 99 ## COG2801 Transposase and inactivated derivatives 58 33 Op 2 . + CDS 57772 - 58752 583 ## COG3039 Transposase and inactivated derivatives, IS5 family + Term 58952 - 58985 1.1 - Term 58784 - 58835 -0.9 59 34 Op 1 11/0.000 - CDS 58900 - 62016 2788 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases - Prom 62075 - 62134 1.6 60 34 Op 2 27/0.000 - CDS 62138 - 63307 407 ## COG0732 Restriction endonuclease S subunits 61 34 Op 3 . - CDS 63304 - 64860 1534 ## COG0286 Type I restriction-modification system methyltransferase subunit - Prom 64897 - 64956 4.2 + Prom 64989 - 65048 4.3 62 35 Tu 1 . + CDS 65124 - 65996 754 ## COG3596 Predicted GTPase + Term 66115 - 66151 3.4 63 36 Tu 1 . + CDS 66369 - 69215 2103 ## COG3468 Type V secretory pathway, adhesin AidA + Term 69237 - 69273 10.3 + Prom 69348 - 69407 2.4 64 37 Tu 1 . + CDS 69543 - 69699 130 ## ROD_49721 hypothetical protein Predicted protein(s) >gi|299856428|gb|ADWV01000023.1| GENE 1 2 - 647 407 215 aa, chain - ## HITS:1 COG:PA5429 KEGG:ns NR:ns ## COG: PA5429 COG1027 # Protein_GI_number: 15600622 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Pseudomonas aeruginosa # 2 215 7 220 474 244 54.0 1e-64 MSRIESDFLGEREVPDDCYYGVQTLRGEDNFHITEMPMSQEPFFIIAFGYVKKAAAMANK ELGTIPADVADALIWACDQLIDGKYREQFVTDWLQGGAGTSTNMNCNEVICNLAAEKLGG VKGDYKRVSPNDHANFGQSTNDTYPTALHLALLLRSNVLLEAVEHLVGAFYKKADEFSTV LKMGRTHLQDAVPMTLGQEFHGWGFTINDEIRVIR >gi|299856428|gb|ADWV01000023.1| GENE 2 1513 - 2769 471 418 aa, chain + ## HITS:1 COG:SMb21042 KEGG:ns NR:ns ## COG: SMb21042 COG2195 # Protein_GI_number: 16264362 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Sinorhizobium meliloti # 2 405 11 408 413 347 47.0 3e-95 MDIVERFINYTKINTTTSRENGAKGIMPSSPGQMKLAKLLVSELEALGMEDIILRENAIV TATLPANTDETIPVVSFFGHLDTSAEQTADTKAQRLPYNGGDLCLNPELNIYLRESEFPE LKNYIGDDLIVTDGTSLLGADDKAALAAIMNALQFLISHPEIRHGEVKVGFVPDEEQGLR GAKAFDVSEFGADFGYTLDCCGIGEFVYENWNAGDAEIIFTGQSAHPMSAKGKLKNSLLM AHKFISMLPGGEAPEYTEGREGYYWVKQLQGNSARTVLKLDIRDFSEEGYHARKTFVRQL AESACALWGEGSVICQLSDRYANVFNSLQGEGHYPIDIALRAYQRCGITPTPVAMRGGYD GAVLSQKGLPCPNIFTGAHNFHSIYEYLPVRSLRAASDVVIAIIQETFNGFTTGNRES >gi|299856428|gb|ADWV01000023.1| GENE 3 2766 - 4127 912 453 aa, chain + ## HITS:1 COG:dcuD KEGG:ns NR:ns ## COG: dcuD COG3069 # Protein_GI_number: 16131117 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Escherichia coli K12 # 1 453 1 455 455 284 39.0 3e-76 MIKVVIALLVIVIVARLILKGYRAEPVLFIAGLALMVCTWFTGWGTVLPKGVSGTGISFL DPFEVMRNLFSTRAADLGLMIMTLMGFAHYMDHIGANEAVVRVVTRPLRTLRSPYVLLFF SYLFASLLQLAIPSATGLAVLLMGTMFPIMLGLGLSAASAAGVIATSLGVAYTPTAIDAI RGSEAVNMDVVEYVVYHQGPAALATVLIVGISHFFWQKHCDRKAGTLPHEIGTTTVIKAG STPAYYALLPMLPILMAVGSSEIFVTGINLNIITIVLISMAICMLIEWVRKCDLKAVCDG FTHFLKGMGTAFTGVVGLLVAAGVFAHGIKSIGAIDQLILMAEHVGLPPFAMGIVFALVT LAAAVIMGSGNAPFLAFVELIPQIAASMGVNAISMILPMQQASHMGRAMSPVSGVVIAVS SGANITPFEVVKRTALPLIVGFVFHSAIIGIFY >gi|299856428|gb|ADWV01000023.1| GENE 4 4773 - 5219 297 148 aa, chain + ## HITS:1 COG:CAC3514 KEGG:ns NR:ns ## COG: CAC3514 COG3344 # Protein_GI_number: 15896751 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Clostridium acetobutylicum # 47 135 55 151 470 99 49.0 2e-21 MMINEAHAQATAASGRGDGQYPSGLHDGAEISTAAGGQTKAEVPLTMEAVITRENLMLAY QRVVENKGVAELKPWLKKNWRSVWQVLIDGNYQPRAIRRMDIPKPDGGVRTLGIPTVVDR LIQQAIAQQLSAIVDTASAATQTTATST >gi|299856428|gb|ADWV01000023.1| GENE 5 5727 - 6152 203 141 aa, chain + ## HITS:1 COG:ECs1393 KEGG:ns NR:ns ## COG: ECs1393 COG2963 # Protein_GI_number: 15830647 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 141 1 141 141 243 91.0 8e-65 MELQDWRKEPRKNYSNEFKLRMVELASQPGACVAQIARENGVNDNVIFKWLRLWQNEGRV SRRLPVTTSSDTGVELLPVEITPDEQKEPVAAIAPSLSTSTQTRVSASSCKVEFRHGNMT LENPSPELLTVLIRELTGRGR >gi|299856428|gb|ADWV01000023.1| GENE 6 6149 - 6499 314 116 aa, chain + ## HITS:1 COG:ECs3868 KEGG:ns NR:ns ## COG: ECs3868 COG3436 # Protein_GI_number: 15833122 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 116 1 116 116 224 96.0 3e-59 MISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLNDNPFSGHLFIFRGRRGDTVKILWAD ADGLCLFTKRLEEGQFIWPAVRDGKVSITRSQLAMLLDKLDWRQPKTSSRNSLTML >gi|299856428|gb|ADWV01000023.1| GENE 7 6530 - 8143 863 537 aa, chain + ## HITS:1 COG:ECs1339 KEGG:ns NR:ns ## COG: ECs1339 COG3436 # Protein_GI_number: 15830593 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 537 1 537 537 973 95.0 0 MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALTRAEEKIEEDEREIEH LRAQIEKLRRMLFGTRSEKLRREVELAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHR RPLPAHLPREIHRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTK CDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNW VDACCQLMTPVNDALYRYVMNTRKVHTDDTPVKVLAPGQKKAKTGRIWTYVRDDRNVGSS SPPAVWFAYSPNRQGKHPEQHLRPFRGILQADAFTGYDRLFSAGREGGALTEVACWAHAR RKIHDVYISSKSATAEEALKRISELYAIEDEIRGLPESERLAVRQQRSKVLLTSLHEWMV EKNGTLSKKSRLGEAFSYVLNQWDALCYYSDDGLAEADNNAAERALRAVCLGKKNFMFFG SDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK >gi|299856428|gb|ADWV01000023.1| GENE 8 8310 - 9314 372 334 aa, chain + ## HITS:1 COG:RSc1378 KEGG:ns NR:ns ## COG: RSc1378 COG1446 # Protein_GI_number: 17546097 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Ralstonia solanacearum # 17 332 3 319 320 280 52.0 2e-75 MAAFALCIGYAHAESQTPIRLVIHGGAGTITKDTITPEQEKQYREKLTDALNAGYAVLNS GGSSLDAVQRAINVMEDSPLFNAGKGAVFTHDGKNELDAAIMDGKTKMAGAVAGVTTIKN PINAAYAVMTKSPHVLMISNGAELFAKEQGLVMVEPAYFKTDFRWQQLQNALKDEKITLD HNGKSASLLLPPKNYDYKYGTVGAVALDKDGNLAAGTSTGGMTNKRYGRVGDSPIIGAGT YADNNTVAVSATGTGEMFIRTSTAYNIAAQVKYKNTPLKEAAQNALDEVKNINGSGGVIV LDKNGNYTMSFNTEGMYRGTIGNDGKAIVSIYEQ >gi|299856428|gb|ADWV01000023.1| GENE 9 9652 - 9930 284 92 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_1110 NR:ns ## KEGG: EcSMS35_1110 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 92 1 92 92 146 100.0 2e-34 MKTITVLLTTVLFSMSASAALTPACEEYYKEIDNFVAKMKEMGTPEAQVNTLKQQYEQSR KQIAALPDASQDMACKQGLDALRQSMSAAGIK >gi|299856428|gb|ADWV01000023.1| GENE 10 10682 - 10798 76 38 aa, chain + ## HITS:1 COG:YPO0011 KEGG:ns NR:ns ## COG: YPO0011 COG3328 # Protein_GI_number: 16120364 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 38 103 140 402 64 76.0 5e-11 MNNQILALYARGMTTREITSVFKEMYDADVSPALISKI >gi|299856428|gb|ADWV01000023.1| GENE 11 11243 - 12136 560 297 aa, chain + ## HITS:1 COG:Z2082 KEGG:ns NR:ns ## COG: Z2082 COG3328 # Protein_GI_number: 15801523 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 2 43 182 223 293 71 71.0 2e-12 MQALDAFGKEWDARYPQISRSWQANWPNVATFFVYPEASRKVIINNRQYGAPLTLTSVMV LSDCYSWANEQFGHASLGDPRRTRRLVSLASSLAQHAGLSIVKSSQSTAQVEGAYRLMRN PSVSPEAIAEAGFTATARACEAHPLLLALEDTTTISFSHSTAFDDLGNTTTNPKTRGLLA HSVLMYAPDSALPVGLIEQQRWSRATDTYGVKHQRKERPCEEKESSRWQQASERMAERLG EIQKRVITVCGLEADIWHYLHYKVSHGQRFVVRAAQNSRQEEAPGKLFELPEVLTTA >gi|299856428|gb|ADWV01000023.1| GENE 12 12437 - 12790 238 117 aa, chain + ## HITS:1 COG:no KEGG:E2348C_1549 NR:ns ## KEGG: E2348C_1549 # Name: not_defined # Def: transposase of ISEc13 # Organism: E.coli_0127 # Pathway: not_defined # 1 117 341 457 457 227 94.0 1e-58 MQTRDNLERIVVIKAFIAVRVLGLRQGGISEETQNDSCEKILLPTEWKLLWVKLEGKPLP SQTPTLKWACLKLAKLRRWHDSKRTGRPGCVVMWDGWFRLQDMVEGYLVMESLDQEL >gi|299856428|gb|ADWV01000023.1| GENE 13 12947 - 13660 295 237 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764775|ref|ZP_02171829.1| ribosomal protein L16 [Bacillus selenitireducens MLS10] # 9 236 5 235 236 118 32 1e-25 MNTLSFLLFSEEESLFITLGKICVAFILGGIIGLERESKGKPVGFKTCVIISVASCVLTI VSIQSAEYYAEISMNIRSDPMRLAAQIISGVGFLGAGVILHRHDDAISGLTTAAIVWASA GVGITCGAGFYMHALVTTALFMIAIKLSYFVLFLQAKNQFPGKVKVHVTLDERSGLQALI ECINQQKNIIEAFTIRDVKKGRIEVNLKVVIRKKMTLPELYHSLSKLEHVCAIALEH >gi|299856428|gb|ADWV01000023.1| GENE 14 13724 - 14758 681 344 aa, chain - ## HITS:1 COG:Cj0340 KEGG:ns NR:ns ## COG: Cj0340 COG1957 # Protein_GI_number: 15791708 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Campylobacter jejuni # 18 336 1 318 335 279 43.0 5e-75 MAAKGMKFNPRKSENESMRIIIDCDPGNGIPGANIDDGLALALAIAAPQIALEMITTVAG NTPVDVGYAVARDLITQLDIPVAVYRGASRALLEDPQPWREKLDHGVDQFGLRQLWSNVP APALCQQVEPHAPEAIGELICRNPGEITLVATGPLTNVAIALQLYPQIVHAVKNIVVMGG VFNVPGYLKDTNFGLDPEAAHAVLTSGAPVTLVPMDVTTQTQMLHADLDRLAKTENGLSR YLAQTIRPWITYSMQTRNLPGCWIHDVLTIAWLLDPSLATTAEDYLDVSLEGITRGMTCC YGRDTLRLNIGIPEPKGAQVTILQSIDNPRLISLIEHYIQNYGA >gi|299856428|gb|ADWV01000023.1| GENE 15 14718 - 15749 543 343 aa, chain - ## HITS:1 COG:BH2219 KEGG:ns NR:ns ## COG: BH2219 COG1609 # Protein_GI_number: 15614782 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 13 309 7 302 335 177 36.0 3e-44 MTQSHSQRVTRSDVAKEAGTSVAVVSYVINNGPRPVAEATRQRVLQAIKKTGYRPNGIAR ALASGSTQTYGLVAPDISNPFIASMAHALQHEAFADGKVLLLGDAGDSSCRERELINNML HRQVDGLIYTSVDRHPYINLIQESGTPCVMLDRVDPGLNVSVIQVDEQLAAMQVTQHLID HGYRDIGIICGPREMLNTQDRIRGWQQALEASSLVVNPSWIFSTNYTRAGGYEATKRMLE HQLPRALFATNEQQALGCLRALAEHGLRVPEDVALVCFNATQESAYNVPSLTAVRQPVDK MARAAIDMLKNWDGEVRRVEFEFYLRTGESCGCQGHEVQPEKK >gi|299856428|gb|ADWV01000023.1| GENE 16 15854 - 17248 1092 464 aa, chain - ## HITS:1 COG:Cj0339 KEGG:ns NR:ns ## COG: Cj0339 COG0477 # Protein_GI_number: 15791707 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Campylobacter jejuni # 13 464 3 453 453 631 72.0 0 MNTHSSTVSLTDNQQAAQERLETSEGRREFWRATVSCWLGTTMEYADFALYGLAAGIIFG DVFFPEATPVMALLSSFAAYSVGFIARPIGALLFGWIGDKHGRKIVMVITIGLMGMSTML IGLIPSYAQIGVWAPICLVILRFSQGLGAGAELSGGTVMLGEYAPVKRRGLVSSVIGLGS NSGTLLASLVWLIVLQMDKDDLLSWGWRIPFLCSILIAAAALLIRRHIRETPVFERQKAL LQAEREKVIREEKAQQQHDSRSFWKRTRAFWTMVGLRIGENGPSYLAQGFIIGYVAKVLM VDKSVPTAAVLIASVLGFAIIPLAGWLSDRFGRRIIYRWFCLLLILYAFPAFMLLDSREP WIVIPTIITGMGLASLGIFGVQAAWGVELFGVTNRYTKMAFAKELGSILSGGTAPLIASA LLSYYGHWWPIAIYFAFMAAIGLVTTFFAPETRGRDLNLPEDAI >gi|299856428|gb|ADWV01000023.1| GENE 17 18197 - 18418 211 73 aa, chain + ## HITS:1 COG:ECs1381 KEGG:ns NR:ns ## COG: ECs1381 COG2963 # Protein_GI_number: 15830635 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 50 1 50 108 102 92.0 2e-22 MAKNTRFSPEVRQRTVRMVLENQGEYDSQWAAICSIVPKIGCTPETLRVWCTTSMSGIPG AVMVDSPPLNVSV >gi|299856428|gb|ADWV01000023.1| GENE 18 18500 - 18634 108 44 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_1102 NR:ns ## KEGG: EcSMS35_1102 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 44 1 44 44 73 100.0 2e-12 MKIVQTSLSESVTQHLAERILCGELPAGSVLPGENELATVSRGG >gi|299856428|gb|ADWV01000023.1| GENE 19 18854 - 19507 182 217 aa, chain - ## HITS:1 COG:Z5089 KEGG:ns NR:ns ## COG: Z5089 COG2801 # Protein_GI_number: 15804202 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 217 9 225 225 444 100.0 1e-125 MSRYRAGRLMKYLNLSSCQPGKHQYKNARQEHTCLPNLLERQFAVPEPDRVWCGDITYIW AGNRWCYLAVVMDLFARRVIGWSLSANADTALISSALRMAYEVRGQPRDVMFHSDQGSQY TGLKYQQLLWRYRIKQSVSRRGNCWDNSPMERFFRSLKTEWVPTDGYTGKDVARQQISSY ILNYYNSVRPHHYNGGLTPEESENRYHFYCKTVASIT >gi|299856428|gb|ADWV01000023.1| GENE 20 19720 - 20031 223 103 aa, chain - ## HITS:1 COG:ECs4535 KEGG:ns NR:ns ## COG: ECs4535 COG2963 # Protein_GI_number: 15833789 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 103 13 116 116 170 97.0 6e-43 MNKKTKRTFTPEFRLECAQLIVDKGYSYRQASEAMNVGSTTLESWVRQLRRERQGIAPFA TPITPDQQRIRELEKQVHRLEEHNTILKKATALLMSDSLNGSR >gi|299856428|gb|ADWV01000023.1| GENE 21 20294 - 20509 60 71 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_1099 NR:ns ## KEGG: EcSMS35_1099 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 16 71 1 56 56 106 98.0 2e-22 MLLRRNSTLQELTLTVLWGEMDKDGAIDIIVFFCSFGVISTGNNLTPASEVVVTGRRRET TQVQENKVERL >gi|299856428|gb|ADWV01000023.1| GENE 22 20578 - 20910 128 110 aa, chain + ## HITS:1 COG:ECs1338 KEGG:ns NR:ns ## COG: ECs1338 COG3436 # Protein_GI_number: 15830592 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 74 1 76 116 126 80.0 8e-30 MISLPSGTRICLIAGVADMRKSFNGLGKQGQHVLNYNPFFGHLFIFRGRRGDTVKIFWAD GLCLFTKRQEEGNLSGLRYVTAGYPLPARSWQCSLVSWASVSQKHHALTR >gi|299856428|gb|ADWV01000023.1| GENE 23 21263 - 21952 640 229 aa, chain + ## HITS:1 COG:STM3830 KEGG:ns NR:ns ## COG: STM3830 COG2186 # Protein_GI_number: 16767115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 229 1 229 229 409 94.0 1e-114 MTLNKTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNIIREVFRSLMAKRLIEM KRYRGAFVAPRNQWNYLDTDVLQWVLENDYDPRLISAMSEVRNLVEPAIARWAAERATSS DLAQIESALNEMIANNQDREAFNEADIRYHEAVLQSVHNPVLQQLSIAISSLQRAVFERT WMGDEANMPQTLQEHKALFDAIRHQDGDAAEQAALTMIASSTRRLKEIT >gi|299856428|gb|ADWV01000023.1| GENE 24 21949 - 22827 593 292 aa, chain + ## HITS:1 COG:dgoK KEGG:ns NR:ns ## COG: dgoK COG3734 # Protein_GI_number: 16131561 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-galactonokinase # Organism: Escherichia coli K12 # 1 292 1 292 292 536 96.0 1e-152 MTARYIAIDWGSTNLRAWLYQGDHCLESRQSEAGVTRLNEKSPAAVLAEVTADWREENTP VVMAGMVGSNVGWKVAPYLSVPVRFSSIGEQLTSVGDNIWIIPGLCVSHDDNHNVMRGEE TQLIGARALAPSSLYVMPGTHCKWVQADSQQINDFRTVMTGELHHLLLNHSLIGAGLPPQ ENSADAFAAGLERGLNAPAILPQLFEVRASHVLGTLPREQVSEFLSGLLIGAEVASMRDY VTHQHAITLVAGTSLTARYQQAFQAMGCDVAVVAGDKAFQAGIRSIAHAVAN >gi|299856428|gb|ADWV01000023.1| GENE 25 22811 - 23428 579 205 aa, chain + ## HITS:1 COG:RSc2752 KEGG:ns NR:ns ## COG: RSc2752 COG0800 # Protein_GI_number: 17547471 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Ralstonia solanacearum # 1 201 3 203 213 241 63.0 1e-63 MQWQTKLPLIAILRGITPDEALVHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKA LIGAGTVLKPEQVDVLARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALDA GAQALKIFPSSAFGPQYIKALKAVLPPDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLY RAGQSVERTAQQAAAFVKAYREAVQ >gi|299856428|gb|ADWV01000023.1| GENE 26 23425 - 24573 1523 382 aa, chain + ## HITS:1 COG:dgoA_2 KEGG:ns NR:ns ## COG: dgoA_2 COG4948 # Protein_GI_number: 16131560 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 382 96 477 477 795 99.0 0 MKITKITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAAVHELGDYLIGQDPSRI NDLWQVMYRAGFYRGGPILMSAIAGIDQALWDIKGKVLNSPVWQLMGGLVRDKIKAYSWV GGDRPANVIDGIKILREIGFDTFKLNGCEELGLIDNSRAVDAAVNTVAQIREAFGNQIEF GLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPKLAAQTHIPLAAGERMFSR FDFKRVLEAGGISILQPDLSHAGGITECYKIAGMAEAYDVTLAPHCPLGPIALAACLHID FVSYNAVLQEQSMGIHYNKGAELLDFVKNKEDFSMVGGFFKPLTKPGLGVEIDEAKVIEF SKNAPDWRNPLWRHEDNSVAEW >gi|299856428|gb|ADWV01000023.1| GENE 27 24693 - 25244 268 183 aa, chain + ## HITS:1 COG:dgoT KEGG:ns NR:ns ## COG: dgoT COG0477 # Protein_GI_number: 16131559 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 149 16 164 445 298 98.0 4e-81 MDIPVNAAKPGRRRYLTLVMIFITVVICYVDRANLAVAAAHIQEEFGITKAEMGYVFSAF AWLYTLCQIPGGWFLDRVGSRVTYFIAIFGWSVATLFQGFATGLMSLIGLRAITGIFEAP AFPTNNRMVTSWFPEHERASAVGFYTSGHAPIRLSYQPRPNRRTRSDICIQLRYSRSINA LPR >gi|299856428|gb|ADWV01000023.1| GENE 28 25337 - 25549 83 70 aa, chain - ## HITS:1 COG:STM0946 KEGG:ns NR:ns ## COG: STM0946 COG1943 # Protein_GI_number: 16764308 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 1 70 41 110 152 139 91.0 2e-33 MRKLCEWKSVRILEAECCADHIHMLVEIPPKMSASGFMGYLKGKSSLMLYEQFGDLKFKY RNREFWCSGY >gi|299856428|gb|ADWV01000023.1| GENE 29 26368 - 27267 385 299 aa, chain - ## HITS:1 COG:STM4511 KEGG:ns NR:ns ## COG: STM4511 COG0583 # Protein_GI_number: 16767755 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 292 8 296 302 338 57.0 6e-93 MKNIETKWLYDFLTLEACRNFCQAAKDRNLSQPAFSRRIKALESAIGVVLFDRTTSPLQL TEEGRLFHSQTRSLVQQLECNLNELGGDNSFNLPNIKIAAAHSLSLSMLPKLLHSLTTLG GDFIYHVEAIDVVQAVNTLREGKSDFIISFRDEEFMQSPFCCIKLFESELYPVCAADQQG KPIFDLTNSQAPLLDYTPTSYMGRLVNRHLAEQGGIAGHTILVSSMSELLKNMALNGLGI AWLPLWSIADELNTKRLVCPWPAKWAVPIQAYIYRMDTRLNKTAEHFWTILRNNIKENS >gi|299856428|gb|ADWV01000023.1| GENE 30 27607 - 28326 519 239 aa, chain + ## HITS:1 COG:STM4510 KEGG:ns NR:ns ## COG: STM4510 COG1794 # Protein_GI_number: 16767754 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Salmonella typhimurium LT2 # 1 229 1 228 244 246 53.0 4e-65 MKGLIGVLGGMGPAATVDLFNKFVTFTAAQRDQEHIPLIISSIPDIPDRTDALMHNGLSP LPVMRDYMHKLEDAGAECIVIPCNTAHYWFKELKDACHIDILSIIDTTVDEVRVCGKTRI GLLATDATLYMGLYQKGIESLGFNYITPDADGQKNVMKSIYSLKAGNVTHAQKLMEEQAE NLFSRGAEILILGCTEIPIILSQAVKDQPLRYIDSTASLVRAGIKWYENRIGKDQHLTQ >gi|299856428|gb|ADWV01000023.1| GENE 31 28385 - 29683 1083 432 aa, chain + ## HITS:1 COG:ECs5119 KEGG:ns NR:ns ## COG: ECs5119 COG2704 # Protein_GI_number: 15834373 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 1 432 1 433 433 330 48.0 3e-90 MVWLEIIVVLGAIFFGIRQGGIGIGLCGGLGLAILTLGFGLPMGSPPVDVILIIMTVVVA ASALQAAGGMDYLVRLASNFMRRNPKYINIIAPIITWLMTIMAGTGFIVFSTLPVIAEVA KESGIRPSRTLAGSVVASQVAISGSPISAAMAAMLTIMEVNGVSFIQVMSVCLPTSFVAA MVAAFIASRQGCELQDDEVYLERLQKGLVQKYENNNSIKPGATLSVGLFMLATIAIVILA AFPQLRPGFDISKPMETRDIIIICMLSAACLMVILCKMSTDDIILTSTFRAGMSSLAVIL GIVTLGTTFIDAHLTEIKDIAGDILQTYPMLLALVLFFTCALLYSQGATTPLIIPLAVAL NIPTWAILASYVAVTGVFVLPTYPTSLAAMEFDTTGTTRVGNYLLNHPFMLPGLGGVIAG VTFGFVIAPMMV >gi|299856428|gb|ADWV01000023.1| GENE 32 29906 - 31306 700 466 aa, chain + ## HITS:1 COG:VC2698 KEGG:ns NR:ns ## COG: VC2698 COG1027 # Protein_GI_number: 15642693 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Vibrio cholerae # 2 465 15 478 483 503 53.0 1e-142 MSRIESDFLGEREIPDDCYYGVQTLRGKDNFHITEMPMSQEPFFIIAFGYVKKAAAMANK ELGTIPADVADALIWACDQLIDGKYREQFVTDWLQGGAGTSTNMNCNEVICNLAAEKLGS VKGDYKRVSPNDHANFGQSTNDTYPTALHLALLLRSNVLLEAVEHLVGAFYKKADEFSTV LKMGRTHLQDAVPMTLGQEFHGWGFTINDEIRVIRNAQEHLRVVNLGATAIGTCVTAHPD YPALAVKYLAQITGINFRNSEDLIAATSDCGAYVALSSAMKSLSVKLTKVCNDIRLLASG PRCGLAEINLPQLQPGSSIMPGKVNPVIPEVTNQSCFLVQGLDTTVMLAASAGQLELNVM EPVITFALFTSLKVMTNACNTLRTKCIDGITANSDRTAEMVMHSCGIVTLLKPHLGYKVC SEMAHEAYHTGKSLHQIVVVERKLLTQEEWEKTFNLDNLIAPKFEQ >gi|299856428|gb|ADWV01000023.1| GENE 33 31462 - 32796 823 444 aa, chain + ## HITS:1 COG:Cj0088 KEGG:ns NR:ns ## COG: Cj0088 COG2704 # Protein_GI_number: 15791476 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Campylobacter jejuni # 1 444 1 444 445 497 68.0 1e-140 MDIITVLQIVVLLGAIFLGVRMGGIGIGYAGGIGVLILGLCLDMKPGNIPWDVILIIASV ISAISAMQLAGGLDYLVQVAERILRKNPKYINYLAPVVTYVLTIFAGTGHTAFSMIPVIV EVSKEQNIKPSCPLSIAVVSSQIAITASPVSAAVIYMSGVLEGFGWSYPVLLGIWLFTTF VGCMLTAFIISLISDMKLDNDPVYRERLSKGLVSAPVKSVNKQLKPYARRSVAIFLIGVI LVVLYASAISPTLGLIDNVVVSRDAAIMSLMLLVGGFITLFCKADINKIADSSVFKSGMV ACICVLGVAWLGDTFVSGHSGEIKELARTTVSLYPALLAVVFFLAAMLLYSQAATAKAIT PAIVTALGITAANPDDSYMLVASFAAVSALFVLPTYPTLLGAVQMDDTGTTRIGKYVFNH AFFIPGVLAIAFSVLLGFLVVSMF >gi|299856428|gb|ADWV01000023.1| GENE 34 33284 - 34330 1289 348 aa, chain + ## HITS:1 COG:ECs3833 KEGG:ns NR:ns ## COG: ECs3833 COG0252 # Protein_GI_number: 15833087 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 1 348 1 348 348 606 98.0 1e-173 MNFYKRTALAALVMGFSGAALALPNITILATGGTIAGGGDSATKSNYTAGKVGVENLVNA VPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYF LDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGR DVTKTNTTNVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVY NYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKNGTAVVRSSRVPTGAT TQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQTKDPQQIQQIFNQY >gi|299856428|gb|ADWV01000023.1| GENE 35 34924 - 35649 252 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 3 223 2 222 226 101 35 1e-20 MNNVLIVDDDILVADVIRRIVEQTPAFKCCGIALSLGQAKEIISVNKKLADLILLDLYIN KDNGLDLLPFLHSIHCKSDVIVISAADDSATIKDSLHYGVSDYLIKPFHISRLVDSLTRW KHKKTLLESQKIFNQSELDLLTHKIIPNTEKIRHLPKGLSTDTLRIICRWIDEHQHKKFT LNELASGIKISRISCRKYIIWLVSCHILAFDFSCGVTGRPAYRYWIRHQYYPYIKKYSEK P >gi|299856428|gb|ADWV01000023.1| GENE 36 36627 - 37283 347 218 aa, chain - ## HITS:1 COG:mlr3366 KEGG:ns NR:ns ## COG: mlr3366 COG2186 # Protein_GI_number: 13472918 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 3 213 2 212 239 66 27.0 3e-11 MDKRKELFESIKDYLLDEANRKADGRIETETELATRFNTSRYKVRQALSTLVQMGMLERA PRRGSLLKNVGQSSINDQLLMQFDLSGFDISEFTEARILVECAIIPLATRRIFPAMLSKL ENELRLIEENADNPQIADQHDRDFHLLLLQASGNRVLQVFSDVLIAYFEKTRESLPDNDC QYFLDTASKQREILSYIKKGDAQMASELMRVHLLEKKI >gi|299856428|gb|ADWV01000023.1| GENE 37 37441 - 37941 61 166 aa, chain + ## HITS:1 COG:CAC3500 KEGG:ns NR:ns ## COG: CAC3500 COG2704 # Protein_GI_number: 15896737 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Clostridium acetobutylicum # 2 135 1 133 439 125 52.0 3e-29 MLFVIQFAIVLTCIGIGGRFGGIGLGAAGGLGLAILTFGFGVPPDSPPITVISIILAVIT CIAILQAAGGLDLFVTIAEKILQKRPGAITFLGPAVAYLFTAICGTGYVAFSIYPVIAEI AADARVRPERRPVNAVFFWPRYLYRVALFNICDRGLSLAAKTEYYN >gi|299856428|gb|ADWV01000023.1| GENE 38 37841 - 38770 579 309 aa, chain + ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 1 297 138 433 446 306 53.0 4e-83 MQYFSGQGIFTALLCSIYATEVYRWLQKRNITIKLPEQVPPGVSRSFEVLIPVIVIMITL HPLNLFIEHVTGMILPEAIMAMLKPLVAASDSLLAVILAVLLCQILWFAGIHGTMIVTGI MNPFWMANLASNQAALAAGEAIPHTFVQGFWDHFLFIGGVGSTLPLAILLIRSRAAHLRT IGRMGFVPGLFNINEPILFGVPIIMNPILFIPFVFIPVINAILAWYAIDLGLVEKVVMMT AWTTPAPIGASWATNWAIAPVILCFICMAIAALMYYPFVKAYEKTLLAADNSNVESKNEV SFELKSEKV >gi|299856428|gb|ADWV01000023.1| GENE 39 38809 - 40188 578 459 aa, chain + ## HITS:1 COG:STM3775 KEGG:ns NR:ns ## COG: STM3775 COG2723 # Protein_GI_number: 16767059 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Salmonella typhimurium LT2 # 1 459 1 459 460 646 64.0 0 MEYKFPDGFWWGSASSATQSEGSVDGDGKAKNIWDHWYNLEPNRFHEQIGPAETSTFYKN YHQDILLMKRIGHNSFRTSISWARLLPDGEKINREAVEFYNNVIDDLIENGIEPIFGLFH FDMPLYWQERGGWQSRETVAAYETYAKVCFELFGDRVKHWVTFNEPVVVVEGGYLYDFHY PNNVNFRSAAQVAFHIMLAHSKAVRAYKDMGLSGKIGIVLNLTPSYPRSNNEEDLKASFI ADLFFNRSFLEPAINGIYPVELIEILKTYDQLPEYESGDLEIIQQGKVDFLGVNYYQPRR VKARATMINPDSPFMPDWFFENYEMPGRKMNVYRGWEIYEKGIYDILINLRDNYGNIPCY ISENGMGVENETRFIADDGQIKDHYRIDFIREHLKWVHRAISEGSQCQGYHLWTFIDNWS WTNAYKNRYGFISLDLDSQVRTVKQSGEWFAEVSVNNGF >gi|299856428|gb|ADWV01000023.1| GENE 40 40199 - 40510 368 103 aa, chain + ## HITS:1 COG:YPO2680 KEGG:ns NR:ns ## COG: YPO2680 COG1447 # Protein_GI_number: 16122885 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Yersinia pestis # 5 99 18 112 115 99 54.0 1e-21 MLDTEEVVMGIIVNAGHSRSLCYEALNYAKSGDFDHASKLLEMAAEVGKEAHAIQTKLIE EDEGMGKTTMTLVMVHAQDHLMTSILCREMITELVQIYKSKLN >gi|299856428|gb|ADWV01000023.1| GENE 41 40806 - 41117 166 103 aa, chain + ## HITS:1 COG:VC0256 KEGG:ns NR:ns ## COG: VC0256 COG2963 # Protein_GI_number: 15640285 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Vibrio cholerae # 1 102 13 114 114 133 79.0 9e-32 MTGRNRRNFSPEFRLEAAQLVLDQHYTVAAAATAMNVGKSTMDKWVRQLKEERAGKSPIA SPMTPEQIEIRELKKRLQRVEMERDILKKATALLMSDSLNNSH >gi|299856428|gb|ADWV01000023.1| GENE 42 41303 - 41980 182 225 aa, chain + ## HITS:1 COG:VC0257 KEGG:ns NR:ns ## COG: VC0257 COG2801 # Protein_GI_number: 15640286 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Vibrio cholerae # 1 224 66 289 290 353 73.0 1e-97 MVTTKGIKLSRWRATKLMKALNIISCQQPGHRYKKASKEHIEIPNYLDRQFAVTEPNQAW CGDVTYIWTGKRRAYLAVVLDLFSRKPVGWAMSFFPDSALTGKALSMAWEARGKPANLLY HSDQGSHYTSRNFRQLLWRYQIKQSLSRRGNCWDNSPMERFFRSLKTEWVPDNGYANFSE ASTAITNYITGYYSQLRPHQYNGGLTPNESERLFWKNSKAVASFC >gi|299856428|gb|ADWV01000023.1| GENE 43 42045 - 43031 150 328 aa, chain - ## HITS:1 COG:yi22 KEGG:ns NR:ns ## COG: yi22 COG2801 # Protein_GI_number: 16132094 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 33 328 6 301 301 582 95.0 1e-166 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARGWGVSLVSRCLRVSRAQLHVILR RTDDWKDGRRSRHSDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRIY RIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFRCDNGEKLRVTFALDCC DREALHWAVTTGGFDSETVQDVMLGAVERRFGSELPTSPVEWLTDNGSCYRANETRQFAR MLGLEPKNTAVRSPESNGIAESFVKTIKRDYISVMPKPDGLTAAKNLAEAFEHYNEWHPH SALGYRSPREYLRQQASNGLSDNRCLEI >gi|299856428|gb|ADWV01000023.1| GENE 44 43457 - 44467 726 336 aa, chain + ## HITS:1 COG:SMb20324 KEGG:ns NR:ns ## COG: SMb20324 COG1609 # Protein_GI_number: 16264058 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 1 325 1 326 338 167 35.0 3e-41 MSLKAIAAELGISVTTVSRALGGFSDVSASTRARVEAEARRRGYRPNTLARRLKTGKTDA VGLVFPEHAVLFSSSVFVDMVSCISRELARHDIDLLLIADDERADSHSYMRLVESRRVDA LIVAHTMDNDPRLTHLQEAGIPFLALGQVPSGLPCAWFDFDNHAGTWQATQHLIALGHQR IALLSEDNSRAYVTARRQGWRDALSEHGLPETWLRRVSPTRRSGFQAVTELMSLPLPPTA IITDSDLIGDGAAMSLQLSGHLSGEDAVSLVVYDGLPQDSIIEQDVAAVLQSTRHRVGRQ IADMIRQLVTNVSPEMLQVLWQPEFHPGKTTLAPSA >gi|299856428|gb|ADWV01000023.1| GENE 45 44561 - 46687 1733 708 aa, chain + ## HITS:1 COG:YPO1581 KEGG:ns NR:ns ## COG: YPO1581 COG3345 # Protein_GI_number: 16121851 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Yersinia pestis # 1 704 1 704 708 864 57.0 0 MEPMYRRLTSPHSDLIIKTHPYAEIVWWGSTLKHFSPDDCISLERPVANGRLDTDTPLTL MAENGAGLFGSPGLEGHRNGLDASPVFRTISVVQAGESLTLTSEDAVAGLRMVSELVLTS SGVLKMRHALTNLREGDWQVNRFAITLPVAERAEEVMAFHGRWTREFQPHRVRLTHDGFV LENRRGRTSHEHFPALIAGAPGFSEQQGEVWAVHLGWSGNHRMKCEVKTDGRRYLQAEAL WMPGEKALKKDETVYTPWLYASYSPEGLNGMSQQYHRFLRDEIIRFPEQKPRPVHLNTWE GIYFDHDPNYIMQMAGRAAALGVERFIIDDGWFKGRNDDHAALGDWYLDEQKYPDGLMPV INHVKSLGMEFGIWVEPEMINPDSDLFRRHPDWVLSMPGYTQPTGRHQYVLNLNIPEAFA YIYERCLWLLGEHPVDYVKWDMNRELVQAGHEGRAAADAQTRQFYRLLDLLRERFPRVEF ESCASGGGRIDFEVLTRTHRFWASDNNDALERCTIQRGMSYFFPPEVMGAHIGHHRCHAT FRQHSIAFRGLTALFGHMGLELDPVTAGEEESAGYRRYASLYKEWRQLIHTGTLWRVDMP DAATQVQGVVSPDQSQALFLVSQLAMPDHTLPGALRFPGLAPQARYRLRVVDHPDIQLVG EGGHTMRRLPGWMNQTSDISGEWLAQAGIQLPVLDPESAMLIALERLA >gi|299856428|gb|ADWV01000023.1| GENE 46 46742 - 46966 104 74 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_3381 NR:ns ## KEGG: EcE24377A_3381 # Name: lacY # Def: galactoside permease # Organism: E.coli_E24377A # Pathway: not_defined # 1 52 6 57 430 79 92.0 4e-14 MNTVSTHKNPDFWIFGLFFFLYFFIMATCFPFLPVWLSDIVGLSKTDTGIVFHASPCLPS ASSRCWGSSQTVLA >gi|299856428|gb|ADWV01000023.1| GENE 47 46978 - 48018 938 346 aa, chain + ## HITS:1 COG:ECs0396 KEGG:ns NR:ns ## COG: ECs0396 COG0477 # Protein_GI_number: 15829650 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 325 77 401 417 352 57.0 8e-97 MWIISLLLVLFAPFFLYVFAPLLRFNIWAGALSGGIFIGFVFSAGAGAIEAYIERVSRSS GFEYGKARMFGCLGWALCATTAGLLFNVDPSLVFWMGSGCALLLVLLVALARPGTSQTAM VMNALGANSPVISAGMVFSLFRMRQMWMFVLYMIGVACVYDVFDQQFATFFRAFFDTPQA GIRAFGFATTAGEICNAIIMFCSPWIINRIGAKNTLLVAGLIMTIRITGSAFATTATEVV ILKMLHALEVPFLLVGAFKYITGVFDTRLSATIYLIGFQFSKQLAAIFLSTFAGHLYDRM GFQNTYLVLGGIVLAVTVLSAFTLSSTRKTAAPSAEIATAQTEVRL >gi|299856428|gb|ADWV01000023.1| GENE 48 48015 - 49445 965 476 aa, chain + ## HITS:1 COG:ECs3243 KEGG:ns NR:ns ## COG: ECs3243 COG1621 # Protein_GI_number: 15832497 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Escherichia coli O157:H7 # 2 476 3 477 477 702 70.0 0 MKQRLASAQVALDTLRARRGDTWYPVFHLAPPAGWMNDPNGLIYFSGRYHAFFQHHPASE HQGPMHWGHATSPDMLHWQHEPVALAPGDEYDRDGCFSGSAVDDNGVLSLIYTGHLCLED RGDDSIIREVQCLATSRDGIHFEKQGCVLTPPEGIMHFRDPKVWREGGYWWMVIGARDTS DTGQVLLYRGTSLRDWRQERVLAQSAAGESYMWECPDFFRCGDHHWLMFSPQGMTPGGYR FRNRFQSGVLPGHWQPGAAFALSGAFEELDHGHDFYAPQSLVAEDGRRIIMAWMNMWDSP MPTKREAWAGCLTLPRELFERHGRLCQRPVREAESLRGTCQPLHPVRLSGTQLLAEDAQA VELVLTWHTLDSQAEHYGIHLGDGLRLYVDNQAGRLVLWRHYPDEGLDGYRSIALPGAEY LTLRVFLDRSSVEVFVNDGDATLSSRIYPQPGTRRLSLYAAHGEAVLTDGSLWTLA >gi|299856428|gb|ADWV01000023.1| GENE 49 49509 - 50024 474 171 aa, chain + ## HITS:1 COG:STM2433 KEGG:ns NR:ns ## COG: STM2433 COG2190 # Protein_GI_number: 16765753 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Salmonella typhimurium LT2 # 1 168 1 167 169 197 60.0 1e-50 MGLLGRIKQLISENEKPAEVTRVMAPLSGEIVPLDTVPDAVFAGKIVGDGIAIRPSGGDT LMAPVSGTIGKILETNHAFSIRTDSGTELFVHFGINTVDLRGEGFRRIAQEGQLISTGDP VIGFDLALLQQKAQSTLTPVIVADSDRVQEITLFSGPVIAGETPVFDISSQ >gi|299856428|gb|ADWV01000023.1| GENE 50 50030 - 50233 70 67 aa, chain + ## HITS:1 COG:no KEGG:PMI2586 NR:ns ## KEGG: PMI2586 # Name: not_defined # Def: hypothetical protein # Organism: P.mirabilis # Pathway: not_defined # 9 60 3 54 202 67 59.0 1e-10 MSDNIASGQLVSGKAAHLAWCGLVALHLARRDGRIASKIQENLFLNRWRSTALKQHRFPR TYQSPAE >gi|299856428|gb|ADWV01000023.1| GENE 51 50406 - 50606 151 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300819076|ref|ZP_07099279.1| ## NR: gi|300819076|ref|ZP_07099279.1| conserved domain protein [Escherichia coli MS 107-1] # 1 66 38 103 103 132 98.0 7e-30 MVPNGDAGSFYLSRSRLEAAFDYQGRLLHPLTGDVSALAALLRNAGWYPIPAGTTDMAMF ELSVIR >gi|299856428|gb|ADWV01000023.1| GENE 52 50636 - 51562 473 308 aa, chain + ## HITS:1 COG:ECs3242 KEGG:ns NR:ns ## COG: ECs3242 COG0524 # Protein_GI_number: 15832496 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 3 304 2 303 304 359 61.0 3e-99 MSTVKVWGLGDAVVDLLPEKPGTLLQCPGGAPANVAVGVARLGGLSGFVGCVGDDPFGRF MRKTLADEGVDTAYMHTDPLYRTSTVVVSLVPGGERTFTFMVRPSADLFLTPDDLPPFRA GEWLHTCSNALSAEPCRSATFQAMENIRQAGGRVSFDPNIRTDLWQSTSQLRECLHRALM LADVAKVSEEELFFISGEQDVRKGTDVLASHYPLALLLVTQGKDGVMARWQGKNLYFPAT PVVSVDTTGAGDAFVAGLLAALAAEGMPSGEQALASVIEQAQRCGALATTAKGAMTALPR RQDLLKHP >gi|299856428|gb|ADWV01000023.1| GENE 53 51662 - 53158 1298 498 aa, chain + ## HITS:1 COG:YPO3711 KEGG:ns NR:ns ## COG: YPO3711 COG4580 # Protein_GI_number: 16123849 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Yersinia pestis # 89 498 26 423 423 76 25.0 1e-13 MKKHLLSCAILLACSPVFAAGNTDSIEARLAALEKRLQDAETRAQKAESRATATEQQVQQ LAATPATQPVVPQTVSVPPEKKADNSGFEFHGYARSGLLMNDAASGSKSGPYLTPAGETG GSVGRLGNEGDTYVETVFEHKKTLESGATTRFKVMLADGQKTYNDWSANSSDLNVRQVVA ELGNLPDFTGPLKHSTVWAGKRFDRDNFDIHWLDSDVVFLGGTGGGIYDVKWNDTLRSNF SLYGRNFGEMEDIDNNVQNYILTMNHFAGPFQLMVSGMRAKDNDDRRDNNGDLIHASAAS HGVHVLAGLHNDSFWGLREGTAKIALLYGHGLGAEVKGIGSDGALRSDADTWRLAAYGTT PLGNGWHIAPSVMAQGSKDRYARGDSYEWVTLNTRLIKEVTQNFALAFEGTYQYMDLKPE GYKDRNAVNGSFYKLTFAPTLKAGGLGDFFSRPELRLFATWMDWSSRLDNYASDDAFGGS GFNAGGEWNFGVQMETWF >gi|299856428|gb|ADWV01000023.1| GENE 54 54241 - 54567 347 108 aa, chain + ## HITS:1 COG:ECs1381 KEGG:ns NR:ns ## COG: ECs1381 COG2963 # Protein_GI_number: 15830635 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 108 1 108 108 187 97.0 4e-48 MTKNTRFSPEVRQRAIRMVLESQGEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGG GDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKVEFDRLWKK >gi|299856428|gb|ADWV01000023.1| GENE 55 54567 - 55046 198 159 aa, chain + ## HITS:1 COG:ECs1208 KEGG:ns NR:ns ## COG: ECs1208 COG2801 # Protein_GI_number: 15830462 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 138 2 139 296 273 94.0 1e-73 MPLLDKLRKLYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEILRVYDG NHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTVSRKAVAAGDRVN RQFVAERPDQLWVADFTYGVPGVQGGHGCLNEPRVCLEY >gi|299856428|gb|ADWV01000023.1| GENE 56 55653 - 57161 454 502 aa, chain + ## HITS:1 COG:ykfC KEGG:ns NR:ns ## COG: ykfC COG3344 # Protein_GI_number: 16128243 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Escherichia coli K12 # 1 364 1 364 376 718 98.0 0 MQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAHTPGVDGVNKTMLQARL AVELQILRDELLSGHYQPLLARRVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWES DFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEGDLSSYFDTVHHRLLMKAVRR RISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLHERYLS GKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQAEAIREECR GVLEGSLKLRLNMDKTKITHVNDGFIFLGHRIIRKRSRYGEMRVVSTIPQEKARNFAASL TALLSGNYSESKVDMAEQLNRKLKGWAMFYQFVDFKAKVFSYIDRVVFWKLAHWLAHKYR TGIASLMRWWCKSPKPGQSKTWVLFGKTNHGKLSGEILYRLVGQGKKLFRWRLPEGNPYL RTETRNTYTSRFTEGAMAFASI >gi|299856428|gb|ADWV01000023.1| GENE 57 57326 - 57703 99 125 aa, chain + ## HITS:1 COG:tra5_g1 KEGG:ns NR:ns ## COG: tra5_g1 COG2801 # Protein_GI_number: 16128357 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 125 164 288 288 213 78.0 9e-56 MKPTLSRELALDALMMAVWRRKPDGEVIVHSDQGSQYCSADYQALLKQHNLSGSMSAKGC CYDNACEESFFHSLKVECLHGEHFISREIMRVTVFNYTECDYNCWRRHSWCGGLSPEQFE KQNFA >gi|299856428|gb|ADWV01000023.1| GENE 58 57772 - 58752 583 326 aa, chain + ## HITS:1 COG:yi52_g5 KEGG:ns NR:ns ## COG: yi52_g5 COG3039 # Protein_GI_number: 16129331 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Escherichia coli K12 # 1 326 1 326 326 634 98.0 0 MSHQLTFADSEFSIKRRQTRKEIFLSRMEQILPWQNMTAVIEPFYPKAGNGRRPYPLETM LRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQ LFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTRNKEQQRDPEMHQTKKGNQWHFGMKAH IGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWL IAERPGKVKTLKQNPRKNKTAINIEYMKASIRARGEHPFRIIKRQFGFVKARYKGLLKND NQLAMLFTLANLFRVDQMIHQWERSQ >gi|299856428|gb|ADWV01000023.1| GENE 59 58900 - 62016 2788 1038 aa, chain - ## HITS:1 COG:HI0218 KEGG:ns NR:ns ## COG: HI0218 COG0610 # Protein_GI_number: 16273673 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Haemophilus influenzae # 4 1038 3 1026 1026 1432 73.0 0 MTHQTHTIAESNNFIVLDKYIKAEQTSDSYQSESDLERELIQDLRNQGYEFISVKSQSAM LANVREQLQNLNGVVFNDSEWRRFTEQYLDNPSDGILDKTRKIHIDYICDFIFDDERLEN IYLIDKKNLMRNKVQIIQQFEQTGSHANRYDVTILVNGLPLVQIELKKRGVAIREAFNQI HRYSKESFNSENSLFKYLQLFVISNGTDTRYFANTTKRDKNSFDFTMNWAKSDNTLIKDL KDFTATFFQKHTLLNVLVNYSVFDSSQTLLVMRPYQIAATERILWKIKSSFTAKNWSKPE SGGYIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDYQTMKEYQRFSPDSVNG SENTAGLKRNLDKDDNKIIVTTIQKLNNLMKAESDLPVYNQQVVFIFDECHRSQFGEAQK NLKKKFKRYYQFGFTGTPIFPENALGSETTASVFGRELHSYVITDAIRDEKVLKFKVDYN DVRPQFKSLETETDEKKLSAAENQQAFLHPMRIQEITQYILNNFRQKTHRTFPGSKGFNA MLAVSSVDAAKAYYATFKRLQEEAANKSATYKPLRIATIFSFAANEEQNAIGEISDETFD TSAMDSSAKEFLDAAIREYNSHFKTNFSTDSNGFQNYYRDLAQRVKNQDIDLLIVVGMFL TGFDAPTLNTLFVDKNLRFHGLMQAFSRTNRIYDATKTFGNIVTFRDLERSTIDAITLFG DKNTKNVVLEKSYAEYMEGFTDAATGEAKRGFMAVVAELEQRFPDPASIESEKEKKDFVK LFGEYLRAENILQNYDEFATLKALQQIDLSDPVAVEKFKAEHYVDDEKLAELQTIRLPAD RKIQDYRSAYNDIRDWQRREKEAEKKEKSTTDWDDVVFEVDLLKSQEINLDYILGLIFEH NRQNKGKSEMIEEVKRLIRSSLGNRAKEGLVVDFIQQTNLDDLPDKASIIDAFFTFAQRE QQREAEALIKEENLNEEAAKRYIRTSLKREYATENGTELNETLPRLSPLNPQYKTKKQTV FQKISAFIEKFKGVGGKI >gi|299856428|gb|ADWV01000023.1| GENE 60 62138 - 63307 407 389 aa, chain - ## HITS:1 COG:HP0790 KEGG:ns NR:ns ## COG: HP0790 COG0732 # Protein_GI_number: 15645409 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Helicobacter pylori 26695 # 144 389 156 426 431 121 31.0 2e-27 MSELTYLEKLLDGVKVEWQTLGKVLKRTKGTKITAGQMKALHKDNAPLKIFAGGKTVAFV DFKDIPEKDINREPSIIVKSRGIIEFEYYDKPFSHKNEMWSYHSNNDAISIKYIYYFLKI NEGYFQKIGGKMQMPQIATPDTDKFEVPIPCPDNPEKSLAIQSEIVRILDKFTELTAELT AELSMRKKQYNYYRDQLLSFKEDEVEGKRKTLGEIMKMRAGQHISAHNIIERKEESYIYP CFGGNGIRGYVKEKSHDGEHLLIGRQGALCGNVQRMKGQFYATEHAVVVSVMPGINIDWA FHMLTAMNLNQYASKSAQPGLAVGKLQELKLFVPSIERQIYIAAILDKFDTLTNSITEGL PREIELRQKQYEYYRDLLFSFPKPETVSN >gi|299856428|gb|ADWV01000023.1| GENE 61 63304 - 64860 1534 518 aa, chain - ## HITS:1 COG:NMB0829 KEGG:ns NR:ns ## COG: NMB0829 COG0286 # Protein_GI_number: 15676726 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Neisseria meningitidis MC58 # 1 513 2 514 514 791 75.0 0 MTSIQQRAELHRQIWQIANDVRGSVDGWDFKQYVLGALFYRFISENFSSYIEAGDDSICY AKLDDSVITDDIKDDAIKTKGYFIYPSQLFCNVAAKANTNDRLNADLNSIFVAIESSAYG YPSEADIKGLFADFDTTSNRLGNTVKDKNARLAAVLKGVEGLKLGDFNEHQIDLFGDAYE FLISNYAANAGKSGGEFFTPQHVSRLIAQLAMHGQTHVNKIYDPAAGSGSLLLQAKKQFD DHIIEEGFFGQEINHTTYNLARMNMFLHNINYDKFDIKLGNTLTEPHFRDEKPFDAIVSN PPYSVKWIGSDDPTLINDERFAPAGVLAPKSKADFAFVLHALNYLSAKGRAAIVCFPGIF YRGGAEQKIRQYLVDNNYVETVISLAPNLFFGTTIAVNILVLSKHKTDTKVQFIDASELF KKETNNNILTDAHIEQIMQVFASKEDVAHLAKSVAFEAVVANDYNLSVSSYVEAKDNREI INIAELNAELKTTVSKIDQLRKDIDAIVAEIEGCEVQK >gi|299856428|gb|ADWV01000023.1| GENE 62 65124 - 65996 754 290 aa, chain + ## HITS:1 COG:ECs1395 KEGG:ns NR:ns ## COG: ECs1395 COG3596 # Protein_GI_number: 15830649 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 566 97.0 1e-161 MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTCHEPVIGIMGKSGAGKSSLCNALFQGE VTPVSDVYAGTREVQRFRLSGHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLW LIKADDRALSVDEYFWRHILHRGHQRVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIRE KTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELCTESVRG QAREQFTGAVDRIFDTAESVCVASVARTVLRAVRDTVVSVARAVWNWIFF >gi|299856428|gb|ADWV01000023.1| GENE 63 66369 - 69215 2103 948 aa, chain + ## HITS:1 COG:Z1211 KEGG:ns NR:ns ## COG: Z1211 COG3468 # Protein_GI_number: 15800732 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 EDL933 # 1 948 57 1005 1005 1380 89.0 0 MKRHLNTSYRLVWNHITGTLVVASELARSRGKRTGVAVALSLVAVTSVPALAADTVVQAG ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL QRVNAGGSVSDTVISAEGGQSLQGQAVNTTLNGGEQWIHEGGIATGTVINEKGWQAVKSG AMATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG GTATNVTLKQGGALVTSTAATVTGSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAQKT RVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNASGKFSIDGISGQASGLLLEN GGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGE IRFDNQTTQDAVLSRAVAKGDAPVTFHKLTTSNLTGQGGTINMRVRLDGSNASDQLVING GQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAFALSRPLQAGAFNYTLN RDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGG HLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDD GSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSL ETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSTQHVRAGFRLGSHNDMT FGEGTSSRDTLRDSTKHRVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQN GTSLDLQAGLEARVRENITLGVQAGYAHSVSGSSAEGYNGQATLNVTF >gi|299856428|gb|ADWV01000023.1| GENE 64 69543 - 69699 130 52 aa, chain + ## HITS:1 COG:no KEGG:ROD_49721 NR:ns ## KEGG: ROD_49721 # Name: not_defined # Def: hypothetical protein # Organism: C.rodentium # Pathway: not_defined # 1 52 1 52 272 104 100.0 8e-22 MRLASRFGYANQIRRDRPLTREELMQVVPSVFGEEKHTSRSENYTWIPTITV Prediction of potential genes in microbial genomes Time: Sun May 15 15:45:47 2011 Seq name: gi|299856427|gb|ADWV01000024.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont23.1, whole genome shotgun sequence Length of sequence - 67064 bp Number of predicted genes - 64, with homology - 64 Number of transcription units - 29, operones - 16 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 10/0.067 + CDS 1 - 1023 1369 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 2 1 Op 2 7/0.133 + CDS 1030 - 1725 508 ## COG1145 Ferredoxin 3 1 Op 3 4/0.333 + CDS 1712 - 2575 621 ## COG0348 Polyferredoxin 4 1 Op 4 7/0.133 + CDS 2551 - 3021 463 ## COG3043 Nitrate reductase cytochrome c-type subunit 5 1 Op 5 3/0.533 + CDS 3031 - 3633 489 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 6 1 Op 6 14/0.000 + CDS 3646 - 4269 522 ## COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component 7 1 Op 7 14/0.000 + CDS 4269 - 4928 740 ## COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component 8 1 Op 8 9/0.067 + CDS 4970 - 5707 760 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 9 1 Op 9 9/0.067 + CDS 5704 - 5913 285 ## COG3114 Heme exporter protein D 10 1 Op 10 16/0.000 + CDS 5910 - 6389 668 ## COG2332 Cytochrome c-type biogenesis protein CcmE 11 1 Op 11 11/0.067 + CDS 6386 - 8329 2355 ## COG1138 Cytochrome c biogenesis factor 12 1 Op 12 5/0.133 + CDS 8326 - 8883 672 ## COG0526 Thiol-disulfide isomerase and thioredoxins 13 1 Op 13 . + CDS 8880 - 9932 1239 ## COG4235 Cytochrome c biogenesis factor + Term 9938 - 9974 7.1 - Term 9926 - 9961 6.1 14 2 Tu 1 . - CDS 9967 - 10614 819 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 10750 - 10809 3.8 + Prom 10709 - 10768 3.2 15 3 Op 1 . + CDS 11015 - 13300 1252 ## COG3468 Type V secretory pathway, adhesin AidA 16 3 Op 2 . + CDS 13313 - 13525 95 ## COG3468 Type V secretory pathway, adhesin AidA + Term 13540 - 13575 4.2 - TRNA 13629 - 13705 78.0 # Pro GGG 0 0 - Term 13576 - 13618 8.1 17 4 Op 1 8/0.067 - CDS 13780 - 15540 1545 ## COG3083 Predicted hydrolase of alkaline phosphatase superfamily 18 4 Op 2 . - CDS 15560 - 15787 280 ## COG3082 Uncharacterized protein conserved in bacteria - Prom 15859 - 15918 4.6 + Prom 15844 - 15903 6.9 19 5 Tu 1 . + CDS 15969 - 16976 1306 ## COG3081 Nucleoid-associated protein + Term 17066 - 17113 7.4 - Term 17049 - 17101 2.3 20 6 Op 1 . - CDS 17114 - 17494 633 ## PROTEIN SUPPORTED gi|26108973|gb|AAN81176.1|AE016763_135 50S ribosomal protein L25 21 6 Op 2 . - CDS 17523 - 19283 1527 ## COG1061 DNA or RNA helicases of superfamily II 22 6 Op 3 . - CDS 19309 - 19566 82 ## gi|466200|sp|P28247|BICB_ECOLI RecName: Full=Putative uncharacterized protein BicB gi|405943|gb|AAA16407.1| bicB/yeiD - Prom 19678 - 19737 1.5 + Prom 19312 - 19371 4.1 23 7 Op 1 8/0.067 + CDS 19432 - 20127 756 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 24 7 Op 2 . + CDS 20155 - 21345 1277 ## COG0477 Permeases of the major facilitator superfamily + Term 21361 - 21390 0.5 + Prom 21390 - 21449 5.2 25 8 Tu 1 . + CDS 21678 - 22022 223 ## EC55989_2435 hypothetical protein + Term 22058 - 22105 3.6 26 9 Op 1 11/0.067 - CDS 22026 - 23615 333 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 27 9 Op 2 11/0.067 - CDS 23617 - 24642 1053 ## COG4239 ABC-type uncharacterized transport system, permease component 28 9 Op 3 11/0.067 - CDS 24642 - 25736 1425 ## COG4174 ABC-type uncharacterized transport system, permease component 29 9 Op 4 2/0.667 - CDS 25737 - 27551 1482 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 30 9 Op 5 5/0.133 - CDS 27633 - 29189 1099 ## COG2200 FOG: EAL domain - Prom 29220 - 29279 4.1 - Term 29287 - 29324 6.4 31 10 Tu 1 . - CDS 29370 - 29936 358 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 - Prom 29995 - 30054 5.5 32 11 Op 1 3/0.533 - CDS 30348 - 31061 485 ## COG0671 Membrane-associated phospholipid phosphatase 33 11 Op 2 3/0.533 - CDS 31100 - 32086 736 ## COG0523 Putative GTPases (G3E family) - Term 32142 - 32193 2.2 34 12 Tu 1 . - CDS 32204 - 33670 1202 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Prom 33701 - 33760 6.0 - Term 33833 - 33881 5.0 35 13 Tu 1 . - CDS 33893 - 34465 805 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Prom 34395 - 34454 3.4 36 14 Tu 1 . + CDS 34620 - 34874 176 ## COG0727 Predicted Fe-S-cluster oxidoreductase 37 15 Tu 1 . - CDS 34871 - 36052 984 ## COG0477 Permeases of the major facilitator superfamily - Prom 36201 - 36260 3.7 + Prom 36260 - 36319 3.5 38 16 Op 1 11/0.067 + CDS 36420 - 37550 1419 ## COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain 39 16 Op 2 19/0.000 + CDS 37550 - 38488 1022 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 40 16 Op 3 4/0.333 + CDS 38505 - 40196 2083 ## COG1299 Phosphotransferase system, fructose-specific IIC component + Term 40213 - 40243 0.2 + Prom 40412 - 40471 3.1 41 17 Op 1 8/0.067 + CDS 40620 - 41561 603 ## COG0524 Sugar kinases, ribokinase family 42 17 Op 2 4/0.333 + CDS 41549 - 42508 1126 ## COG2313 Uncharacterized enzyme involved in pigment biosynthesis + Term 42558 - 42587 1.9 43 18 Tu 1 . + CDS 42602 - 43852 1434 ## COG1972 Nucleoside permease 44 19 Tu 1 . - CDS 43920 - 44618 457 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 44846 - 44905 6.1 + Prom 44623 - 44682 3.5 45 20 Op 1 3/0.533 + CDS 44748 - 45689 1040 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase + Term 45703 - 45748 4.1 46 20 Op 2 . + CDS 45789 - 47039 1302 ## COG1972 Nucleoside permease 47 21 Op 1 3/0.533 - CDS 47095 - 48183 741 ## COG0524 Sugar kinases, ribokinase family 48 21 Op 2 5/0.133 - CDS 48187 - 49044 956 ## COG0648 Endonuclease IV 49 21 Op 3 . - CDS 49118 - 50167 1236 ## COG2855 Predicted membrane protein - Prom 50218 - 50277 9.8 + Prom 50187 - 50246 9.1 50 22 Op 1 . + CDS 50266 - 51147 204 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 + Prom 51265 - 51324 5.3 51 22 Op 2 . + CDS 51352 - 52821 1903 ## COG0833 Amino acid transporters + Term 52843 - 52874 4.1 + Prom 52853 - 52912 7.1 52 23 Tu 1 . + CDS 53114 - 55105 2096 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 55114 - 55144 2.1 - Term 55103 - 55130 1.5 53 24 Tu 1 . - CDS 55137 - 55973 751 ## COG0627 Predicted esterase - Prom 56002 - 56061 3.0 + Prom 56055 - 56114 4.7 54 25 Op 1 1/0.867 + CDS 56231 - 56524 420 ## COG0302 GTP cyclohydrolase I 55 25 Op 2 4/0.333 + CDS 56511 - 56900 439 ## COG0302 GTP cyclohydrolase I 56 25 Op 3 4/0.333 + CDS 56917 - 58074 1141 ## COG2311 Predicted membrane protein + Prom 58114 - 58173 1.9 57 26 Tu 1 . + CDS 58216 - 59256 990 ## COG1609 Transcriptional regulators + Term 59268 - 59297 -0.2 + Prom 59259 - 59318 5.1 58 27 Op 1 16/0.000 + CDS 59536 - 60534 1400 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 60543 - 60578 6.1 59 27 Op 2 10/0.067 + CDS 60595 - 62115 192 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 60 27 Op 3 . + CDS 62131 - 63141 1396 ## COG4211 ABC-type glucose/galactose transport system, permease component + Term 63159 - 63221 8.6 61 28 Op 1 4/0.333 - CDS 63212 - 64447 1127 ## COG0167 Dihydroorotate dehydrogenase 62 28 Op 2 . - CDS 64441 - 65679 946 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Prom 65837 - 65896 6.5 - Term 65903 - 65945 -0.8 63 29 Op 1 . - CDS 65998 - 66237 262 ## G2583_2688 hypothetical protein 64 29 Op 2 . - CDS 66240 - 66959 820 ## COG2949 Uncharacterized membrane protein - Prom 66990 - 67049 3.7 Predicted protein(s) >gi|299856427|gb|ADWV01000024.1| GENE 1 1 - 1023 1369 340 aa, chain + ## HITS:1 COG:ECs3095 KEGG:ns NR:ns ## COG: ECs3095 COG0243 # Protein_GI_number: 15832349 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 340 489 828 828 705 99.0 0 NINEERMPGWRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQ VQAPGEAKSDLWQLVQFSRRFKTEEVWPEELLAKKPELRGKTLYEVLYATPEVSKYPVSE LAEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQW RYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTG SMTRRVPELHRAFPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQG LVYMPFFDAAQLVNKLTLDATDPLSKETDFKKCAVKLEKV >gi|299856427|gb|ADWV01000024.1| GENE 2 1030 - 1725 508 231 aa, chain + ## HITS:1 COG:napG KEGG:ns NR:ns ## COG: napG COG1145 # Protein_GI_number: 16130142 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli K12 # 1 231 1 231 231 449 100.0 1e-126 MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASA CVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREI ESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFLPT VHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS >gi|299856427|gb|ADWV01000024.1| GENE 3 1712 - 2575 621 287 aa, chain + ## HITS:1 COG:napH KEGG:ns NR:ns ## COG: napH COG0348 # Protein_GI_number: 16130141 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Escherichia coli K12 # 1 287 1 287 287 545 98.0 1e-155 MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPWFGVWILHGNYSSSLLF DTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKRLFCSWVCPLNPITDLANW LRRRFDLNQSATIPRHIRYVLLVVILLGSALTGMLIWEWINPVSLMGRSLVMGFGSGSLL ILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITVAATDRQKCNRCMDCFHVCPEPH VLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFTITTRWSSGAKS >gi|299856427|gb|ADWV01000024.1| GENE 4 2551 - 3021 463 156 aa, chain + ## HITS:1 COG:ECs3092 KEGG:ns NR:ns ## COG: ECs3092 COG3043 # Protein_GI_number: 15832346 # Func_class: C Energy production and conversion # Function: Nitrate reductase cytochrome c-type subunit # Organism: Escherichia coli O157:H7 # 1 156 1 156 156 318 99.0 3e-87 MEFGSEIMKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQ ERMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVG AEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK >gi|299856427|gb|ADWV01000024.1| GENE 5 3031 - 3633 489 200 aa, chain + ## HITS:1 COG:ECs3091 KEGG:ns NR:ns ## COG: ECs3091 COG3005 # Protein_GI_number: 15832345 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Escherichia coli O157:H7 # 1 200 1 200 200 429 100.0 1e-120 MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISC HEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDT PQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTAQKSVAAKMHDQAVKDGQTCI DCHKGIAHKLPDMREVEPGF >gi|299856427|gb|ADWV01000024.1| GENE 6 3646 - 4269 522 207 aa, chain + ## HITS:1 COG:ccmA KEGG:ns NR:ns ## COG: ccmA COG4133 # Protein_GI_number: 16130138 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, ATPase component # Organism: Escherichia coli K12 # 3 207 1 205 205 375 100.0 1e-104 MGMLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEV LWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDGDTAQCLEALAQAGLAG FEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTEQGGI VILTTHQPLNVAESKIRRISLTQTRAA >gi|299856427|gb|ADWV01000024.1| GENE 7 4269 - 4928 740 219 aa, chain + ## HITS:1 COG:ECs3089 KEGG:ns NR:ns ## COG: ECs3089 COG2386 # Protein_GI_number: 15832343 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Escherichia coli O157:H7 # 1 219 2 220 220 280 100.0 2e-75 MFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQLLARIAPGIIWVAALLS SLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWMVTGLPLLILSPLVAMLLGM DVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVLLSILVLPLTIPLLIFATAAMD AASMHLPVDGYLAILGALLAGTATLSPFATAAALRISIQ >gi|299856427|gb|ADWV01000024.1| GENE 8 4970 - 5707 760 245 aa, chain + ## HITS:1 COG:ECs3088 KEGG:ns NR:ns ## COG: ECs3088 COG0755 # Protein_GI_number: 15832342 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 417 100.0 1e-116 MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFAPADYQQGNSYRIIYLH VPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAVFTFIALVTGSAWGKPMWG TWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAGILVLIGVVNLPIIHYSVEWW NTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTLMRMRNLILLMEKRRPWVSELIL KRGRK >gi|299856427|gb|ADWV01000024.1| GENE 9 5704 - 5913 285 69 aa, chain + ## HITS:1 COG:ECs3087 KEGG:ns NR:ns ## COG: ECs3087 COG3114 # Protein_GI_number: 15832341 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Heme exporter protein D # Organism: Escherichia coli O157:H7 # 1 69 1 69 69 90 100.0 7e-19 MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGVAQQRAREARL RAAQQQEAA >gi|299856427|gb|ADWV01000024.1| GENE 10 5910 - 6389 668 159 aa, chain + ## HITS:1 COG:ECs3086 KEGG:ns NR:ns ## COG: ECs3086 COG2332 # Protein_GI_number: 15832340 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c-type biogenesis protein CcmE # Organism: Escherichia coli O157:H7 # 1 159 1 159 159 321 100.0 3e-88 MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRL RVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNH ILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS >gi|299856427|gb|ADWV01000024.1| GENE 11 6386 - 8329 2355 647 aa, chain + ## HITS:1 COG:ccmF KEGG:ns NR:ns ## COG: ccmF COG1138 # Protein_GI_number: 16130133 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Escherichia coli K12 # 1 647 1 647 647 1144 100.0 0 MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAWLLFMSVAGAFLVLVNA FVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTFAVAIFSQRIPLD IVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRDLNPLLQDPGLIFHPPLLYMG YVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIFLTLGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWTLLLAISAFSLCLLGTFLVRSGVLV SVHAFASDPARGMFILAFMVLVIGGSLLLFAARGHKVRSRVNNALWSRESLLLANNVLLV AAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMVPFALLLGVGPLVRWGRDRPR KIRNLLIIAFISTLVLSLLLPWLFESKVVAMTVLGLAMACWIAVLAIAEAALRISRGTKT TFSYWGMVAAHLGLAVTIVGIAFSQNYSVERDVRMKSGDSVDIHEYRFTFRDVKEVTGPN WRGGVATIGVTRDGKPETVLYAEKRYYNTAGSMMTEAAIDGGITRDLYAALGEELENGAW AVRLYYKPFVRWIWAGGLMMALGGLLCLFDPRYRKRVSPQKTAPEAV >gi|299856427|gb|ADWV01000024.1| GENE 12 8326 - 8883 672 185 aa, chain + ## HITS:1 COG:ECs3084 KEGG:ns NR:ns ## COG: ECs3084 COG0526 # Protein_GI_number: 15832338 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 185 1 185 185 378 100.0 1e-105 MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKPVPKFRLESLDNPGQFY QADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLKELG NPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYS KEAAQ >gi|299856427|gb|ADWV01000024.1| GENE 13 8880 - 9932 1239 350 aa, chain + ## HITS:1 COG:ccmH_2 KEGG:ns NR:ns ## COG: ccmH_2 COG4235 # Protein_GI_number: 16130131 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Escherichia coli K12 # 130 350 1 221 221 423 98.0 1e-118 MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIAT DLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIY ARSRRRVRVVPEAFPEQSVQEGKRAGYIVYLPGIVVALIVAGVSYYQTGNYQQVKIWQQA TAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIEGWIMLGRVGMALGNASI ATDAYATAYRLDPKNSDAALGYAEALTHSSDPNDNRLGGELLRQLVRSDHSNIRVLSMYA FNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIERSIAQAMQHLSPQESK >gi|299856427|gb|ADWV01000024.1| GENE 14 9967 - 10614 819 215 aa, chain - ## HITS:1 COG:ECs3082 KEGG:ns NR:ns ## COG: ECs3082 COG2197 # Protein_GI_number: 15832336 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 385 99.0 1e-107 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANRLDIDVILLDL NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI RAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNI SEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ >gi|299856427|gb|ADWV01000024.1| GENE 15 11015 - 13300 1252 761 aa, chain + ## HITS:1 COG:yejO KEGG:ns NR:ns ## COG: yejO COG3468 # Protein_GI_number: 16130127 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 1 761 1 761 836 1297 96.0 0 MASTVEYGETVDGVVLEKDIQLVYGTANNTKINPGGEQHIKEFGVSSNTEIKGGYQYIEM NGTAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYGAANDPTIKGGRLIVEKDGITVLAA IEKGGLLEVKEGGLAIAVDQKAGGAIKASTRVMEAFGTNRLGQFEIKNGIANNMLLENGG SLRVEENDFAYNTTVDSGGLLEVMDGGTVTGVDKKAGGKLIVSTNALEVSGTNSKGQFSI KDGVSKNYELDDGSGLIVMEDTQAIDTILDEHATMQSLGKDTGTKVQANAVYDLGRSDQN GSITYSSKAISENMVINNGRANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGKVVV SEGASFRTHGAVDTSKADVSLENSVWTIIADITTTNQNTLLNLANLAMSDANVIMMDEPV TRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNATGQATGDFKIFVTDTGAS PAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTD VLNMAAAQPLVFDAELDTVRERLGSVKGVNYDTAMWSSAINTRNNVTTDAGAGFEQTLTG LTLGIDSRFSREETSTIRGLFFGYSHSDIGFDRGGKGNVDSYTLGAYAGWEHQNGAYVDG VVKVDRFANTIHCKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDG QDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEP >gi|299856427|gb|ADWV01000024.1| GENE 16 13313 - 13525 95 70 aa, chain + ## HITS:1 COG:ECs3081 KEGG:ns NR:ns ## COG: ECs3081 COG3468 # Protein_GI_number: 15832335 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 1 70 767 836 836 131 98.0 2e-31 MRQEYADSNQVKVNDDGKFNNDVAGTRGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPW NTQAGVVWTF >gi|299856427|gb|ADWV01000024.1| GENE 17 13780 - 15540 1545 586 aa, chain - ## HITS:1 COG:ECs3080 KEGG:ns NR:ns ## COG: ECs3080 COG3083 # Protein_GI_number: 15832334 # Func_class: R General function prediction only # Function: Predicted hydrolase of alkaline phosphatase superfamily # Organism: Escherichia coli O157:H7 # 1 586 1 586 586 1170 99.0 0 MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWPTTLAGRIYSYVSIIGH FSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLLIDSEVFTRFHLHLNPIVW QLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKLRSLTRRRRFARPLAAFLFIA FIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLIEQGNPD AVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFEKQMPALAGFAEQNISFTRHMSSGN TTDNGIFGLFYGISPSYMDGILSTRTPAALITALNQQGYQLGLFSSDGFTSPLYRQALLS DFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFNGTNIDDSNQQAFARKYSRAA GNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEDEETFDWSHGHLQVPLVIHWPGT PAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDLFNPQRRHYWVTAADNDTLAITT PKKTLVLNNNGKYRTYNLRGERVKDEKPQLSLLLQVLTDEKRFIAN >gi|299856427|gb|ADWV01000024.1| GENE 18 15560 - 15787 280 75 aa, chain - ## HITS:1 COG:ECs3079 KEGG:ns NR:ns ## COG: ECs3079 COG3082 # Protein_GI_number: 15832333 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 75 1 75 75 120 100.0 8e-28 MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNLINTSIAPAQRQAIANS FARALQSSINEDKAH >gi|299856427|gb|ADWV01000024.1| GENE 19 15969 - 16976 1306 335 aa, chain + ## HITS:1 COG:ECs3078 KEGG:ns NR:ns ## COG: ECs3078 COG3081 # Protein_GI_number: 15832332 # Func_class: R General function prediction only # Function: Nucleoid-associated protein # Organism: Escherichia coli O157:H7 # 1 335 1 335 335 642 100.0 0 MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEE SELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAV LSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVAD FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI ELESLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAML LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN >gi|299856427|gb|ADWV01000024.1| GENE 20 17114 - 17494 633 126 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|26108973|gb|AAN81176.1|AE016763_135 50S ribosomal protein L25 [Escherichia coli CFT073] # 1 126 1 126 126 248 96 6e-65 MSIESRPLLHTQSRSLTCCWVACSRINLREKEMFTINAEVRKEQGKGASRRLRAANKFPA IIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLQH IDFVRA >gi|299856427|gb|ADWV01000024.1| GENE 21 17523 - 19283 1527 586 aa, chain - ## HITS:1 COG:ZyejH_1 KEGG:ns NR:ns ## COG: ZyejH_1 COG1061 # Protein_GI_number: 15802740 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Escherichia coli O157:H7 EDL933 # 1 358 1 358 358 727 99.0 0 MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE LVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECH RIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH IISQIMEFAEKRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIEDFKAQR FRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP HDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMS LQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITA ADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG >gi|299856427|gb|ADWV01000024.1| GENE 22 19309 - 19566 82 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|466200|sp|P28247|BICB_ECOLI ## NR: gi|466200|sp|P28247|BICB_ECOLI RecName: Full=Putative uncharacterized protein BicB # 1 85 83 167 167 179 97.0 4e-44 MFRKQFERCITDDFAIDGDTIAADFTPGNSTANAELLCDKFIKSHVCDFACKNGGRALTR KSELLSAQYSGLITSLKGKRTVAYY >gi|299856427|gb|ADWV01000024.1| GENE 23 19432 - 20127 756 231 aa, chain + ## HITS:1 COG:ECs3075 KEGG:ns NR:ns ## COG: ECs3075 COG1187 # Protein_GI_number: 15832329 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 469 100.0 1e-132 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR ITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISE GRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV >gi|299856427|gb|ADWV01000024.1| GENE 24 20155 - 21345 1277 396 aa, chain + ## HITS:1 COG:ECs3074 KEGG:ns NR:ns ## COG: ECs3074 COG0477 # Protein_GI_number: 15832328 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 396 1 396 396 652 99.0 0 MTTRQHSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSTQMTLSTYILGFAL GQLIYGPMADSFGRKPVVLGGTLVFAAAAVACALANTIDQLIVMRFFHGLAAAAASVVIN ALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILALAAILASAM IFFLIKETLPPERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVY IEINHVAPENFGYYFALNIVFLFVMTIFNSRFVRRIGALNMFRSGLWIQFIMAAWMVISA LLGLGFWSLVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGAL LSLATFNSAWPMIWSIAFCATSSILFCLYASRPKKR >gi|299856427|gb|ADWV01000024.1| GENE 25 21678 - 22022 223 114 aa, chain + ## HITS:1 COG:no KEGG:EC55989_2435 NR:ns ## KEGG: EC55989_2435 # Name: yejG # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 114 1 114 114 233 100.0 2e-60 MTSLQLSIVHRLPQNYRWSAGFAGSKVEPIPQNGPCGDNSLVALKLLSPDGDNAWSVMYK LSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGVAIAEPFSNYNPF >gi|299856427|gb|ADWV01000024.1| GENE 26 22026 - 23615 333 529 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 268 528 1 261 563 132 33 4e-30 MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLP SPPVEYLSGDIRFHGESLLHVSDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLS LHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIA DEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNY AATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNV VVKNISFTLRAGETLGLVGESGSGKSTTGLALLRLINSQGSIIFDGQPLQNLNRRQLLPI RHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMHEVGLDPETRH RYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYL FISHDLHVVRALCHQVIVLRQGEVVEQGPCARVFATPQQEYTRQLLALS >gi|299856427|gb|ADWV01000024.1| GENE 27 23617 - 24642 1053 341 aa, chain - ## HITS:1 COG:ECs3071 KEGG:ns NR:ns ## COG: ECs3071 COG4239 # Protein_GI_number: 15832325 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 649 99.0 0 MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIANDKPLLVRYDGSWYFPLL KNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGATSINFATDKPFPSPPSRQ NWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFI EVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQA LGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQG KNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDPNKAV >gi|299856427|gb|ADWV01000024.1| GENE 28 24642 - 25736 1425 364 aa, chain - ## HITS:1 COG:ECs3070 KEGG:ns NR:ns ## COG: ECs3070 COG4174 # Protein_GI_number: 15832324 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 364 1 364 364 684 99.0 0 MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGNAGVLPGAGGEGIRA SHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKMLWDYIRFDFGDSLF RSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVYNGSRFDVWSSAFIIIGYAI PAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWYQQITDYLWHITLPVLATVIGGF AALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFPATFISMFFT GSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDISYTLVDPRID FEGR >gi|299856427|gb|ADWV01000024.1| GENE 29 25737 - 27551 1482 604 aa, chain - ## HITS:1 COG:yejA KEGG:ns NR:ns ## COG: yejA COG4166 # Protein_GI_number: 16130115 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 604 3 606 606 1188 99.0 0 MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSA LGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAIN PRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDM LSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRITSWKMGQNIVYSRVKDYWAANLPVN RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQK NESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAA RNYPEAAELVLLAPMKKDLPSEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQ QRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYD MMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLG RALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSAR QQGE >gi|299856427|gb|ADWV01000024.1| GENE 30 27633 - 29189 1099 518 aa, chain - ## HITS:1 COG:rtn_2 KEGG:ns NR:ns ## COG: rtn_2 COG2200 # Protein_GI_number: 16130114 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Escherichia coli K12 # 261 518 1 258 258 531 100.0 1e-150 MFIRAPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLIIDVQKYLDTYFAD LKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNEL IPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQE DYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAF LLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLR WRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDH LHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGT GHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQ ARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW >gi|299856427|gb|ADWV01000024.1| GENE 31 29370 - 29936 358 188 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 65 184 58 174 175 142 57 5e-33 MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVGSETSSLQASQDEFENL VRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEM GKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNE ARRVLSRS >gi|299856427|gb|ADWV01000024.1| GENE 32 30348 - 31061 485 237 aa, chain - ## HITS:1 COG:ECs3066 KEGG:ns NR:ns ## COG: ECs3066 COG0671 # Protein_GI_number: 15832320 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli O157:H7 # 1 237 13 249 249 436 99.0 1e-122 MIKNLPQIVLLNIVGLALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTN NRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIMGLVMLLTAVVLNQLGQALIPVKRASP TLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKVAGLIALIIFVVF AFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK >gi|299856427|gb|ADWV01000024.1| GENE 33 31100 - 32086 736 328 aa, chain - ## HITS:1 COG:yeiR KEGG:ns NR:ns ## COG: yeiR COG0523 # Protein_GI_number: 16130111 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Escherichia coli K12 # 1 328 1 328 328 653 99.0 0 MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIP GGCMCCVNGLPMQVGLNTLLRQEKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATL CILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPESEQALQRWWQQNGGDRQLIH SEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGYQA CGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDS RIELISSSEADWNALQSALLKLRLATTA >gi|299856427|gb|ADWV01000024.1| GENE 34 32204 - 33670 1202 488 aa, chain - ## HITS:1 COG:yeiQ KEGG:ns NR:ns ## COG: yeiQ COG0246 # Protein_GI_number: 16130110 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli K12 # 1 488 1 488 488 1001 98.0 0 MKTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLTDRVLNAQGGDWGICEI SLFSGDQLMSQLRAQNHLYTVLEKGADGNQVIIVGAVHECLNAKLDSLAAIIEKFCEPQV AIVSLTITEKGYCIDPATGALDTSNPRIIHDLQTPEEPHSAPGILVEALKRRRERGLTPF TVLSCDNIPDNGHVVKNAVLGMAEKRSPELAGWIKEHVSFPGTMVDRIVPAATDESLAEI SQHLGVNDPCAISCEPFIQWVVEDNFVAGRPAWEVAGVQMVNDVLPWEEMKLRMLNGSHS FLAYLGYLSGFAHISDCMQDRAFRHAARTLMLNEQAPTLQIKDVDLTQYADKLIARFANP ALKHKTWQIAMDGSQKLPQRMLAGIRIHLGCETDWSLLALGVAGWMRYVSGVDDAGNAID VRDPLSDKIRELVAGSSSEQRVTALLSLREVFGDDLPDNPHFVQAIEQAWQQIVQFGAHQ ALLNTLKI >gi|299856427|gb|ADWV01000024.1| GENE 35 33893 - 34465 805 190 aa, chain - ## HITS:1 COG:ECs3063 KEGG:ns NR:ns ## COG: ECs3063 COG0231 # Protein_GI_number: 15832317 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Escherichia coli O157:H7 # 1 190 86 275 275 384 100.0 1e-107 MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDD IVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTW DGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLSTGLVIQVPEYLSPGEKIRIHI EERRYMGRAD >gi|299856427|gb|ADWV01000024.1| GENE 36 34620 - 34874 176 84 aa, chain + ## HITS:1 COG:YPO1286 KEGG:ns NR:ns ## COG: YPO1286 COG0727 # Protein_GI_number: 16121569 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Yersinia pestis # 1 84 1 84 84 100 66.0 5e-22 MKCRPGCGACCTAPSISSPIPGMPDGKPANTPCIQLDEQQRCKIFTSPLRPKVCAGLQAS AEMCGNSRQQAMTWLIDLEMLTAP >gi|299856427|gb|ADWV01000024.1| GENE 37 34871 - 36052 984 393 aa, chain - ## HITS:1 COG:ECs3062 KEGG:ns NR:ns ## COG: ECs3062 COG0477 # Protein_GI_number: 15832316 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 393 1 393 393 693 99.0 0 MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGS AVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGS TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAA VAFIVCGVMVWLFLPSMQKELPLATGTIEAPRRNRRDTLLLFVICTLMWGSNSLYIINMP LFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVGGVCFYAGML MAHSPVILLGLQLLNAIFIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSVA GIVAEIWNYHAVFWFAMVMIIATLFCLLRIKDV >gi|299856427|gb|ADWV01000024.1| GENE 38 36420 - 37550 1419 376 aa, chain + ## HITS:1 COG:fruB_1 KEGG:ns NR:ns ## COG: fruB_1 COG4668 # Protein_GI_number: 16130107 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol/fructose-specific phosphotransferase system, IIA domain # Organism: Escherichia coli K12 # 1 286 1 286 286 471 100.0 1e-132 MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGMLAREQQTSTFLGNGIAI PHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAASSDEHLGLLRQLTHVLSDD SVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIVASDLLTLQALNAARLKEAGA VDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVSRAANAFDVDGETAAMLVSVAMN DDQPIAVLKRLADLLLDNKADRLLKADAATLLALLTSDDAPTDDVLSAEFVVRNEHGLHA RPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQA LKAIGDAIAAGLGEGA >gi|299856427|gb|ADWV01000024.1| GENE 39 37550 - 38488 1022 312 aa, chain + ## HITS:1 COG:ECs3060 KEGG:ns NR:ns ## COG: ECs3060 COG1105 # Protein_GI_number: 15832314 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Escherichia coli O157:H7 # 1 312 1 312 312 611 100.0 1e-175 MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGG FLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGEVTDFNFSGFEVTPADWER FVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQCPCIIFDSSREALVAGLKAA PWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIAHVVISLGAEGALWVNASGEWIA KPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGITDRPQLA AMMARVDLQPFN >gi|299856427|gb|ADWV01000024.1| GENE 40 38505 - 40196 2083 563 aa, chain + ## HITS:1 COG:fruA_3 KEGG:ns NR:ns ## COG: fruA_3 COG1299 # Protein_GI_number: 16130105 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 226 563 1 338 338 546 100.0 1e-155 MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMAIVLGDSIPNDSALNGK NVWLGDISRAVAHPELFLSEAKGHAKPYTAPVTATAPVAASGPKRVVAVTACPTGVAHTF MAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAADLVIVAADIEVDLAKFAGKPM YRTSTGLALKKTAQELDKAVAEATPYEPAGKTQTATTEGKKESAGAYRHLLTGVSYMLPM VVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGSAFALMVPVLAGYIAFSIADRPGLT PGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLISTQLKLPQSMEALKPILIIPLISSLVV GLAMIYLIGKPVAGILEGLTHWLQTMGTANAVLLGAILGGMMCTDMGGPVNKAAYAFGVG LLSTQTYGPMAAIMAAGMVPPLAMGLATMVARRKFDKAQQEGGKAALVLGLCFISEGAIP FAARDPMRVLPCCIVGGALTGAISMAIGAKLMAPHGGLFVLLIPGAITPVLGYLVAIIAG TLVAGLAYAFLKRPEVDAVAKAA >gi|299856427|gb|ADWV01000024.1| GENE 41 40620 - 41561 603 313 aa, chain + ## HITS:1 COG:ECs3058 KEGG:ns NR:ns ## COG: ECs3058 COG0524 # Protein_GI_number: 15832312 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 1 313 1 313 313 609 98.0 1e-174 MREKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLL SAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAI TAEYLAQHREFIQRAKVIVADCNISEEALAWILDNAANVPVFVDPVSAWKCVKVRDRLNQ IHTLKPNRLEAETLSGIALSGRDDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDISGENGW SAPIKTNVINVTGAGDAMMAGLASCWVDGMLFAESVRFAQGCSSMALSCEYTNNPDLSIA NVISLVENAECLN >gi|299856427|gb|ADWV01000024.1| GENE 42 41549 - 42508 1126 319 aa, chain + ## HITS:1 COG:ECs3057 KEGG:ns NR:ns ## COG: ECs3057 COG2313 # Protein_GI_number: 15832311 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized enzyme involved in pigment biosynthesis # Organism: Escherichia coli O157:H7 # 1 319 1 312 312 552 96.0 1e-157 MSELKISPELLQISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEE TIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTV ASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGL TTEYLETFGVPLIGYQTKALPAFFCRTSSFDVSIRLDSASEIARAMAVKWQSGLNGGLVV ANPIPEQFAMPEESINAAIDQAVAEAEEQGVIGKESTPFLLARVAELTGGDSLKSNIQLV FNNAILASEIAKEYQRLAG >gi|299856427|gb|ADWV01000024.1| GENE 43 42602 - 43852 1434 416 aa, chain + ## HITS:1 COG:yeiM KEGG:ns NR:ns ## COG: yeiM COG1972 # Protein_GI_number: 16130102 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Escherichia coli K12 # 1 416 1 416 416 635 99.0 0 MDIMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGGIMLYFPPGKWAVEQAA LGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVLPAIIFVTALISLLYYIGV MGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRMNRNELFTAICSG MASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFARILSPATEPSQVTFENLSFSETP PKSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALINGIIGGIGGWFGFANASLESIFGY VLAPLAWIMGVDWSDANLVGSLIGQKLAINEFVAYLSFSPYLQTGGTLEVKTIAIISFAL CGFANFGSIGVVVGAFSAISPKRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA >gi|299856427|gb|ADWV01000024.1| GENE 44 43920 - 44618 457 232 aa, chain - ## HITS:1 COG:ECs3055 KEGG:ns NR:ns ## COG: ECs3055 COG0664 # Protein_GI_number: 15832309 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 14 232 1 219 219 444 99.0 1e-125 MKEIHNNDLKQQLMSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRA RLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPRLLN DTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLG VSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ >gi|299856427|gb|ADWV01000024.1| GENE 45 44748 - 45689 1040 313 aa, chain + ## HITS:1 COG:yeiK KEGG:ns NR:ns ## COG: yeiK COG1957 # Protein_GI_number: 16130100 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Escherichia coli K12 # 1 313 1 313 313 631 99.0 0 MEKRKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEIN VPVYAGMPQPIMRQQIVADNIHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDIT LVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTS GVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHD ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWG LVEECVRGYIKTH >gi|299856427|gb|ADWV01000024.1| GENE 46 45789 - 47039 1302 416 aa, chain + ## HITS:1 COG:yeiJ KEGG:ns NR:ns ## COG: yeiJ COG1972 # Protein_GI_number: 16130099 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside permease # Organism: Escherichia coli K12 # 1 416 1 416 416 650 99.0 0 MDVMRSVLGMVVLLAIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVA FGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGV MGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRLNRNELFTAICSG MASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARLLSPATESSQVSFNNLSFTETP PKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFAHASLESILGY LLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVAYLNFSPYLQTGGTLDAKTVAIISFAL CGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA >gi|299856427|gb|ADWV01000024.1| GENE 47 47095 - 48183 741 362 aa, chain - ## HITS:1 COG:yeiI_2 KEGG:ns NR:ns ## COG: yeiI_2 COG0524 # Protein_GI_number: 16130098 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 54 362 1 309 309 560 85.0 1e-159 MNDREKQILKILRRNPLIQQNEIADILQISRSRVAAHIMDLMRKGLIKGKGYILTEQDYC VVVGAINMDIRGMADIRYPQAASHPGSVHCSAGGVGRNIAHNLALLGRDVHLISAIGNDF YGETLLEETRRAGVNVSNCIRLHGHSTATYLAIANKQEETILAINDTHILQQLTPQLLNT SRDLIRHAGVVLADCNLTPEALEWVFTIADEIPMFVDTVSEFKANKVKNWYSRIHTLKPT QNELEILWGQPIKDDNDRIRAVNSLHQQGVKRIFVYLKDESVFCSDKDGEQFLLTAPAHT TVDSFGADDGFMAGLVYSFLEGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVP MV >gi|299856427|gb|ADWV01000024.1| GENE 48 48187 - 49044 956 285 aa, chain - ## HITS:1 COG:ECs3051 KEGG:ns NR:ns ## COG: ECs3051 COG0648 # Protein_GI_number: 15832305 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Escherichia coli O157:H7 # 1 285 1 285 285 580 99.0 1e-165 MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT CHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA >gi|299856427|gb|ADWV01000024.1| GENE 49 49118 - 50167 1236 349 aa, chain - ## HITS:1 COG:ECs3050 KEGG:ns NR:ns ## COG: ECs3050 COG2855 # Protein_GI_number: 15832304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 349 1 349 349 573 100.0 1e-163 MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGFSALTLAILLGMVLGNT IYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGISGIIIDVLTLSSTFLLAC FLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTVAIFL YPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAISPDAENAAVISKMLRVMMLAPF LILLAARVKQLSGANSGEKSKITIPWFAILFIVVAIFNSFHLLPQSVVNMLVTLDTFLLA MAMAALGLTTHVSALKKAGAKPLLMALVLFAWLIVGGGAINYVIQSVIA >gi|299856427|gb|ADWV01000024.1| GENE 50 50266 - 51147 204 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 3 241 1 243 305 83 26 3e-15 MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN EHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPI ELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLARGPVTL EQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLSRR VIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDYCDPANVPR >gi|299856427|gb|ADWV01000024.1| GENE 51 51352 - 52821 1903 489 aa, chain + ## HITS:1 COG:lysP KEGG:ns NR:ns ## COG: lysP COG0833 # Protein_GI_number: 16130094 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 489 1 489 489 911 100.0 0 MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGL MVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLV MSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFIIVGVLMIIG IFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPR AVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVM NAVILTAVLSAGNSGMYASTRMLYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCF LTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHDINDLPYRSGFFPLG PIFAFILCLIITLGQNYEAFLKDTIDWGGVAATYIGIPLFLIIWFGYKLIKGTHFVRYSE MKFPQNDKK >gi|299856427|gb|ADWV01000024.1| GENE 52 53114 - 55105 2096 663 aa, chain + ## HITS:1 COG:cirA KEGG:ns NR:ns ## COG: cirA COG4771 # Protein_GI_number: 16130093 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Escherichia coli K12 # 1 663 1 663 663 1315 100.0 0 MFRLNPFVRVGLCLSAISCAWPVLAVDDDGETMVVTASSVEQNLKDAPASISVITQEDLQ RKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLILVDGKRVNSRNAVFRHNDF DLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTTIQEHRDR GDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGETPRIEGFSSRDGNVE FAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLERQNYSVSHNGRWDYGTSELKYYGEKVE NKNPGNSSPITSESNTVDGKYTLPLTAINQFLTVGGEWRHDKLSDAVNLTGGTSSKTSAS QYALFVEDEWRIFEPLALTTGVRMDDHETYGEHWSPRAYLVYNATDTVTVKGGWATAFKA PSLLQLSPDWTSNSCRGACKIVGSPDLKPETSESWELGLYYMGEEGWLEGVESSVTVFRN DVKDRISISRTSDVNAAPGYQNFVGFETGANGRRIPVFSYYNVNKARIQGVETELKIPFN DEWKLSINYTYNDGRDVSNGENKPLSDLPFHTANGTLDWKPLALEDWSFYVSGHYTGQKR ADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSRDDYSYNEDGRRYFMAVD YRF >gi|299856427|gb|ADWV01000024.1| GENE 53 55137 - 55973 751 278 aa, chain - ## HITS:1 COG:yeiG KEGG:ns NR:ns ## COG: yeiG COG0627 # Protein_GI_number: 16130092 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Escherichia coli K12 # 1 278 1 278 278 556 100.0 1e-158 MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFT TKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAGFYLNATQPPWATHYRMYDY LRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWG IKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAAR QKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYLLK >gi|299856427|gb|ADWV01000024.1| GENE 54 56231 - 56524 420 97 aa, chain + ## HITS:1 COG:ECs3045 KEGG:ns NR:ns ## COG: ECs3045 COG0302 # Protein_GI_number: 15832299 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Escherichia coli O157:H7 # 1 93 1 93 222 180 97.0 6e-46 MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHMTEIMQLLNLDLADDSL METPHRIAKMYVDEIFSGLDYANFPKITLIEKQNEGR >gi|299856427|gb|ADWV01000024.1| GENE 55 56511 - 56900 439 129 aa, chain + ## HITS:1 COG:ECs3045 KEGG:ns NR:ns ## COG: ECs3045 COG0302 # Protein_GI_number: 15832299 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Escherichia coli O157:H7 # 1 129 94 222 222 234 100.0 4e-62 MKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQE RLTQQILIALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHE FLRAVRHHN >gi|299856427|gb|ADWV01000024.1| GENE 56 56917 - 58074 1141 385 aa, chain + ## HITS:1 COG:Z3408 KEGG:ns NR:ns ## COG: Z3408 COG2311 # Protein_GI_number: 15802708 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 EDL933 # 1 385 44 428 428 666 98.0 0 MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITPQDAWTWAFLDLIGQVK FLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLICWR LVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGV DAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAI GVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLA IACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFR QGPVEWLWRQLTLRAAGTAISKTSR >gi|299856427|gb|ADWV01000024.1| GENE 57 58216 - 59256 990 346 aa, chain + ## HITS:1 COG:ECs3043 KEGG:ns NR:ns ## COG: ECs3043 COG1609 # Protein_GI_number: 15832297 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 346 1 346 346 662 99.0 0 MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELDYRPNANAQALATQVSD TIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAEKERHAIEVLIRQRCNALI VHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDNLSGARMATRMLLNNGHQRIG YLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGTGTPDMPGGEAAMVELLGRNLQLTA VFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIPIARYTDPQLTTVRYPIASMAKLAT ELALQGAAGNIDPRASHCFMPTLVRRHSVATRQNAATITNSTNQAM >gi|299856427|gb|ADWV01000024.1| GENE 58 59536 - 60534 1400 332 aa, chain + ## HITS:1 COG:mglB KEGG:ns NR:ns ## COG: mglB COG1879 # Protein_GI_number: 16130088 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 1 332 1 332 332 587 100.0 1e-167 MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLL MNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRK ALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEA RTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMG AVEALKAHNKSSIPVFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLADGKG AADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK >gi|299856427|gb|ADWV01000024.1| GENE 59 60595 - 62115 192 506 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 279 482 17 215 245 78 26 9e-14 MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLF GIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGMF VDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSL TEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDK IIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGA KRTDIVETLFGIREKSAGTITLHGKQINNHNANEAINHGFALVTEERRSTGIYAYLDIGF NSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRW LLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLGITDRILVMS NGLVSGIVDTKTTTQNEILRLASLHL >gi|299856427|gb|ADWV01000024.1| GENE 60 62131 - 63141 1396 336 aa, chain + ## HITS:1 COG:mglC KEGG:ns NR:ns ## COG: mglC COG4211 # Protein_GI_number: 16130086 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type glucose/galactose transport system, permease component # Organism: Escherichia coli K12 # 1 336 1 336 336 486 100.0 1e-137 MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVA GLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIG LINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSGFSTFAQGFVALGS FRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGV FYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVIN YGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYARKK >gi|299856427|gb|ADWV01000024.1| GENE 61 63212 - 64447 1127 411 aa, chain - ## HITS:1 COG:yeiA_1 KEGG:ns NR:ns ## COG: yeiA_1 COG0167 # Protein_GI_number: 16130085 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Escherichia coli K12 # 1 326 3 328 328 679 99.0 0 MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPR FDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGENEQQWEELA RLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIG DMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALR FIQQMRTHPELCDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGL SHYLADQGFDSLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQ AMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIELGEVKFKKGEKEHPVTL >gi|299856427|gb|ADWV01000024.1| GENE 62 64441 - 65679 946 412 aa, chain - ## HITS:1 COG:yeiT KEGG:ns NR:ns ## COG: yeiT COG0493 # Protein_GI_number: 16130084 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 1 412 1 412 412 812 98.0 0 MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAA ETIRENNALGAVCARVCPTEKLCQSGCTRAGVDTPIDIGRLQRFVTDFEQQTGMEIYQPG TKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPGGWLRNGIPQFRLPQSVLDAE IARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVGLSSGSGLPLFEHSDVEIAVDFL QRVRQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFAS ARELGVSIIDGFTPVAVEGNKVTFKHVRLPGELTMAADKIILAVGQHARLDAFAELEPQR NTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAEAIHHYLEGACSC >gi|299856427|gb|ADWV01000024.1| GENE 63 65998 - 66237 262 79 aa, chain - ## HITS:1 COG:no KEGG:G2583_2688 NR:ns ## KEGG: G2583_2688 # Name: yeiS # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 79 1 79 79 134 98.0 8e-31 MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVYIWRAKNPGLFFAYMVA YIGFGILSIGMIVYLIFYR >gi|299856427|gb|ADWV01000024.1| GENE 64 66240 - 66959 820 239 aa, chain - ## HITS:1 COG:ECs3036 KEGG:ns NR:ns ## COG: ECs3036 COG2949 # Protein_GI_number: 15832290 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 446 99.0 1e-125 MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRTG VINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPTDIVLDY AGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRI REFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPEDAQGYPAVTPEQLLELQKKQGK Prediction of potential genes in microbial genomes Time: Sun May 15 15:46:19 2011 Seq name: gi|299856426|gb|ADWV01000025.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont24.1, whole genome shotgun sequence Length of sequence - 64870 bp Number of predicted genes - 62, with homology - 60 Number of transcription units - 32, operones - 12 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 218 - 256 3.0 1 1 Tu 1 . - CDS 317 - 1507 1497 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase - Prom 1542 - 1601 5.0 - Term 1627 - 1667 4.2 2 2 Tu 1 . - CDS 1692 - 2687 1214 ## COG3203 Outer membrane protein (porin) - Prom 2927 - 2986 7.8 - Term 3328 - 3359 4.1 3 3 Tu 1 . - CDS 3374 - 4774 1695 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases - Prom 4833 - 4892 6.4 4 4 Tu 1 . + CDS 4668 - 4937 79 ## - Term 4905 - 4934 1.2 5 5 Tu 1 . - CDS 4943 - 6193 1309 ## COG1488 Nicotinic acid phosphoribosyltransferase - Prom 6388 - 6447 3.5 + Prom 6245 - 6304 4.3 6 6 Tu 1 . + CDS 6411 - 9023 3085 ## COG0308 Aminopeptidase N - Term 9029 - 9073 3.7 7 7 Op 1 24/0.000 - CDS 9230 - 9997 216 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 8 7 Op 2 8/0.067 - CDS 9994 - 10785 765 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 9 7 Op 3 5/0.333 - CDS 10796 - 11941 1224 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 10 7 Op 4 4/0.533 - CDS 11938 - 12897 1022 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 11 7 Op 5 . - CDS 12890 - 13465 504 ## COG0431 Predicted flavoprotein - Prom 13664 - 13723 5.1 12 8 Tu 1 7/0.067 + CDS 13812 - 14363 301 ## COG3539 P pilus assembly protein, pilin FimA + Term 14395 - 14428 4.5 + Prom 14367 - 14426 4.0 13 9 Op 1 10/0.000 + CDS 14446 - 15147 381 ## COG3121 P pilus assembly protein, chaperone PapD 14 9 Op 2 6/0.067 + CDS 15172 - 17772 1768 ## COG3188 P pilus assembly protein, porin PapC 15 9 Op 3 4/0.533 + CDS 17790 - 18833 329 ## COG3539 P pilus assembly protein, pilin FimA + Term 18846 - 18901 -0.6 16 9 Op 4 4/0.533 + CDS 18911 - 19387 242 ## COG3539 P pilus assembly protein, pilin FimA 17 9 Op 5 7/0.067 + CDS 19395 - 19910 227 ## COG3539 P pilus assembly protein, pilin FimA + Term 20057 - 20083 -0.6 + Prom 20016 - 20075 1.6 18 10 Tu 1 . + CDS 20221 - 20613 194 ## COG3121 P pilus assembly protein, chaperone PapD 19 11 Tu 1 . - CDS 20571 - 20780 156 ## gi|213615837|ref|ZP_03371663.1| hypothetical protein SentesTyp_15729 + Prom 20633 - 20692 4.0 20 12 Tu 1 . + CDS 20724 - 21734 918 ## COG0167 Dihydroorotate dehydrogenase + Term 21756 - 21811 12.9 + Prom 21749 - 21808 6.7 21 13 Tu 1 . + CDS 21908 - 22450 525 ## SSON_0950 hypothetical protein + Term 22695 - 22756 0.5 22 14 Tu 1 . - CDS 22505 - 23557 686 ## COG3217 Uncharacterized Fe-S protein - Prom 23623 - 23682 3.4 + Prom 23569 - 23628 5.8 23 15 Op 1 6/0.067 + CDS 23801 - 25909 178 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative 24 15 Op 2 5/0.333 + CDS 25921 - 27828 2332 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Prom 27835 - 27894 1.6 25 16 Op 1 11/0.000 + CDS 27958 - 29211 615 ## COG2995 Uncharacterized paraquat-inducible protein A 26 16 Op 2 8/0.067 + CDS 29216 - 30856 1503 ## COG3008 Paraquat-inducible protein B 27 16 Op 3 3/0.800 + CDS 30853 - 31416 686 ## COG3009 Uncharacterized protein conserved in bacteria + Term 31439 - 31479 4.1 + Prom 31536 - 31595 3.3 28 17 Tu 1 . + CDS 31672 - 31839 77 ## COG3130 Ribosome modulation factor + Term 31857 - 31894 9.1 - Term 31846 - 31881 4.5 29 18 Op 1 8/0.067 - CDS 31909 - 32427 749 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 30 18 Op 2 . - CDS 32496 - 34256 1631 ## COG1067 Predicted ATP-dependent protease - Prom 34284 - 34343 3.7 + Prom 34357 - 34416 4.0 31 19 Tu 1 . + CDS 34442 - 34894 475 ## COG3120 Uncharacterized protein conserved in bacteria + Term 34934 - 34961 1.5 - Term 34911 - 34959 11.3 32 20 Tu 1 . - CDS 34970 - 36010 1185 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Prom 36164 - 36223 12.2 - Term 36254 - 36297 3.1 33 21 Tu 1 . - CDS 36368 - 36877 311 ## COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation - Prom 37064 - 37123 5.8 + Prom 36982 - 37041 4.5 34 22 Tu 1 . + CDS 37096 - 37725 514 ## COG3070 Regulator of competence-specific genes - Term 37624 - 37672 3.9 35 23 Op 1 5/0.333 - CDS 37688 - 39850 1834 ## COG1289 Predicted membrane protein 36 23 Op 2 . - CDS 39860 - 40306 510 ## COG3304 Predicted membrane protein - Prom 40339 - 40398 3.6 + Prom 40303 - 40362 4.7 37 24 Tu 1 . + CDS 40411 - 42483 1809 ## COG0210 Superfamily I DNA and RNA helicases + Term 42568 - 42606 1.2 - Term 42476 - 42507 4.1 38 25 Op 1 3/0.800 - CDS 42515 - 42982 406 ## COG1803 Methylglyoxal synthase - Term 43033 - 43059 -1.0 39 25 Op 2 . - CDS 43069 - 43731 579 ## COG3110 Uncharacterized protein conserved in bacteria 40 25 Op 3 . - CDS 43771 - 43929 87 ## EcSMS35_2154 hypothetical protein + Prom 43725 - 43784 3.7 41 26 Tu 1 . + CDS 43904 - 44317 614 ## COG1832 Predicted CoA-binding protein + Term 44322 - 44361 9.0 - Term 44307 - 44352 12.8 42 27 Op 1 3/0.800 - CDS 44362 - 44679 396 ## COG3785 Uncharacterized conserved protein 43 27 Op 2 . - CDS 44737 - 45927 580 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative - Prom 45997 - 46056 2.0 + Prom 45879 - 45938 2.4 44 28 Tu 1 . + CDS 46022 - 46300 362 ## COG1254 Acylphosphatases + Term 46361 - 46404 1.6 45 29 Op 1 2/0.933 - CDS 46297 - 46626 572 ## COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit - Prom 46650 - 46709 4.8 - Term 46658 - 46697 3.1 46 29 Op 2 . - CDS 46717 - 47376 799 ## COG0670 Integral membrane protein, interacts with FtsH - Prom 47504 - 47563 6.8 - TRNA 47583 - 47670 76.9 # Ser TGA 0 0 + Prom 47877 - 47936 2.7 47 30 Op 1 11/0.000 + CDS 48097 - 49215 812 ## COG1740 Ni,Fe-hydrogenase I small subunit 48 30 Op 2 8/0.067 + CDS 49212 - 51005 1756 ## COG0374 Ni,Fe-hydrogenase I large subunit 49 30 Op 3 7/0.067 + CDS 51024 - 51731 718 ## COG1969 Ni,Fe-hydrogenase I cytochrome b subunit 50 30 Op 4 . + CDS 51728 - 52315 789 ## COG0680 Ni,Fe-hydrogenase maturation factor 51 30 Op 5 . + CDS 52312 - 52710 494 ## ECO111_1087 hydrogenase-1 operon protein HyaE 52 30 Op 6 . + CDS 52707 - 53564 621 ## B21_00987 hypothetical protein + Prom 53606 - 53665 2.2 53 31 Op 1 31/0.000 + CDS 53698 - 55242 1616 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 54 31 Op 2 . + CDS 55254 - 56390 1045 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 55 31 Op 3 . + CDS 56403 - 56495 60 ## 56 31 Op 4 . + CDS 56575 - 57873 732 ## B21_00990 hypothetical protein - Term 57873 - 57908 6.0 57 32 Op 1 3/0.800 - CDS 57988 - 60168 2289 ## COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis 58 32 Op 2 6/0.067 - CDS 60188 - 60634 437 ## COG0394 Protein-tyrosine-phosphatase 59 32 Op 3 . - CDS 60622 - 61761 917 ## COG1596 Periplasmic protein involved in polysaccharide export 60 32 Op 4 . - CDS 61807 - 63903 1872 ## ECO111_1095 hypothetical protein 61 32 Op 5 . - CDS 63903 - 64604 443 ## JW0968 conserved hypothetical protein 62 32 Op 6 . - CDS 64646 - 64870 71 ## EC55989_1094 putative outer membrane lipoprotein Predicted protein(s) >gi|299856426|gb|ADWV01000025.1| GENE 1 317 - 1507 1497 396 aa, chain - ## HITS:1 COG:aspC KEGG:ns NR:ns ## COG: aspC COG1448 # Protein_GI_number: 16128895 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 396 1 396 396 812 100.0 0 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE TTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSV KRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGC CHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV ASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN DALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLR LREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL >gi|299856426|gb|ADWV01000025.1| GENE 2 1692 - 2687 1214 331 aa, chain - ## HITS:1 COG:ompF KEGG:ns NR:ns ## COG: ompF COG3203 # Protein_GI_number: 16128896 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 3 331 34 362 362 568 100.0 1e-162 MADLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNN SEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFF VGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVG AYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSG FANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMST YVDYIINQIDSDNKLGVGSDDTVAVGIVYQF >gi|299856426|gb|ADWV01000025.1| GENE 3 3374 - 4774 1695 466 aa, chain - ## HITS:1 COG:asnS KEGG:ns NR:ns ## COG: asnS COG0017 # Protein_GI_number: 16128897 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Escherichia coli K12 # 1 466 1 466 466 958 99.0 0 MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPN YNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVTGWVEDPDTYPMAAKRHSIEY LREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVS TLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNT SRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRL ERFIEADFAQVDYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYP KDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWY RDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNASF >gi|299856426|gb|ADWV01000025.1| GENE 4 4668 - 4937 79 89 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPAFESRRVRTHPRTVTSLSTATRPWSTSATGTTLIIFSLLIVGKNKHLSTRKWGDTYVT WHLQSDKQNSQMQRKISELKVKKGSRLAP >gi|299856426|gb|ADWV01000025.1| GENE 5 4943 - 6193 1309 416 aa, chain - ## HITS:1 COG:pncB KEGG:ns NR:ns ## COG: pncB COG1488 # Protein_GI_number: 16128898 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Escherichia coli K12 # 17 416 1 400 400 822 99.0 0 MFIVLNAPVRGRYCAPMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGD DLLGIYADAIREQIQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSNDN GKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSALTAGL DMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQAHEWFQ AHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASRYQGLRHDS GDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQLSFGIGTRLTC DIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPHIKKAS >gi|299856426|gb|ADWV01000025.1| GENE 6 6411 - 9023 3085 870 aa, chain + ## HITS:1 COG:ECs1015 KEGG:ns NR:ns ## COG: ECs1015 COG0308 # Protein_GI_number: 15830269 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Escherichia coli O157:H7 # 1 870 1 870 870 1749 99.0 0 MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVRHGASDAPLRLNGEDLK LVSVHINDEPWTAWKEEEGALVISNLPERFTLKIINEISPAANTALEGLYQSGDALCTQC EAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPF PKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEER FGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYF HNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPM AHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDD FVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQP LHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPV KLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFR AVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIY NANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQYHEANNMTDALAALSAA VAAQLPCRDALMQEYDDKWHQDGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPN RIRSLIGAFAGSNPAAFHAEDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKR QEKMRAALEQLKGLENLSGDLYEKITKALA >gi|299856426|gb|ADWV01000025.1| GENE 7 9230 - 9997 216 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 12 211 5 214 305 87 33 1e-16 MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGL ETPTAGDVLAGTTPLAEIQEDTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAARRALAAV GLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQ EHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVDIPRPRRLGSVRLAELEAEVLQR VMRRGHSEQLIRRHG >gi|299856426|gb|ADWV01000025.1| GENE 8 9994 - 10785 765 263 aa, chain - ## HITS:1 COG:ssuC KEGG:ns NR:ns ## COG: ssuC COG0600 # Protein_GI_number: 16128901 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Escherichia coli K12 # 1 263 16 278 278 422 100.0 1e-118 MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQ HLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWF GIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPS IMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADV SAQLLERLWLRWNPAYHLKEATV >gi|299856426|gb|ADWV01000025.1| GENE 9 10796 - 11941 1224 381 aa, chain - ## HITS:1 COG:ECs1018 KEGG:ns NR:ns ## COG: ECs1018 COG2141 # Protein_GI_number: 15830272 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 381 1 381 381 755 99.0 0 MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRSCEDAWL VAASMIPVTQRLKFLVALRPSVTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDG VFLDHSERYEASAEFTQVWRRLLLGETVNFNGKHIHVRGAKLLFPPIQQPYPPLYFGGSS DVAQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAHGRKIRFGIRLHVIVRETNDEAW QAAERLISHLDDETIAKAQAAFARTDSVGQQRMAALHNGKRDNLEISPNLWAGVGLVRGG AGTALVGDGPTVAARINEYAALGIDSFVLSGYPHLEEAYRVGELLFPHLDVAIPEIPQPQ PLNPQGEAVANDFIPRKVAQS >gi|299856426|gb|ADWV01000025.1| GENE 10 11938 - 12897 1022 319 aa, chain - ## HITS:1 COG:ssuA KEGG:ns NR:ns ## COG: ssuA COG0715 # Protein_GI_number: 16128903 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Escherichia coli K12 # 1 319 15 333 333 603 99.0 1e-172 MRNIIKLALVGLLSVSTIAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPQSKISW VEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSP IKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAW AIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALT RSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPK KVDIRQRIWQPTQLEGKQL >gi|299856426|gb|ADWV01000025.1| GENE 11 12890 - 13465 504 191 aa, chain - ## HITS:1 COG:ZycbP KEGG:ns NR:ns ## COG: ZycbP COG0431 # Protein_GI_number: 15800798 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Escherichia coli O157:H7 EDL933 # 1 191 1 191 191 353 97.0 8e-98 MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFAPEDLLYARFDSPALKTF TEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVVLPLATGGTVAHLLAVDYA LKPVLSALKAQEILHGVFADDSQVIDYHHRPQFTPNLQTRLDTALETFWQALHRRDVQVP DLLSLRGNAHA >gi|299856426|gb|ADWV01000025.1| GENE 12 13812 - 14363 301 183 aa, chain + ## HITS:1 COG:ECs1021 KEGG:ns NR:ns ## COG: ECs1021 COG3539 # Protein_GI_number: 15830275 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 183 1 182 182 214 84.0 8e-56 MMTMKKSVLTAFITVVCATSSVMAADDNAITDGKVTFNGKVIAPACTLVAATKDSVVTLP NVSATKLQTNGAVSGVKTDVPIALEGCDVTVTKNATFTFSGTADGVQPTAFANQATTDAA TNVALQMYLPDGSTSVTPGTETSNIQLADSAEQTVTFKVDYIATGKATSGNVNAVTNFHI NYY >gi|299856426|gb|ADWV01000025.1| GENE 13 14446 - 15147 381 233 aa, chain + ## HITS:1 COG:ycbR KEGG:ns NR:ns ## COG: ycbR COG3121 # Protein_GI_number: 16128906 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 233 1 233 233 447 99.0 1e-126 MKTCITKGIVTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEGEEQISLGVRNTSPDVP YLIQSWVMTPDNKKSADFIITPPLFVLNPANENLLRIMYIGAPLAKDRETLFFTSVRAVP STTKREEGNTLKIATQSVIKLFWRPKGLAYPLGEAPAKLRCTSSADMVTVSNPTPYFITL TDLKIGGKVVKNQMISPFDKYQFSLPKGAKNSSVTYRTINDYGAETPQLNCKS >gi|299856426|gb|ADWV01000025.1| GENE 14 15172 - 17772 1768 866 aa, chain + ## HITS:1 COG:ycbS KEGG:ns NR:ns ## COG: ycbS COG3188 # Protein_GI_number: 16128907 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli K12 # 1 866 1 866 866 1666 98.0 0 MYRTHRQHSLLSSGGVPSFIGGLVVFVSAAFNAQAETWFDPAFFKDDPSMVADLSRFEKG QKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKGIAACLTTESLDAMGVNTDAFPAFKQL DKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNARGYVPPERWDEGINALLLGYS FSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTAEWKNLSSYLQRA VIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVVRGIAKSNAQITI KQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSSVPLLQRQGR IKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYGGGQYAEYYRAAMFGLGFNLGD FGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNQLGTNFQLMGYRYSTSGFYTLSDTM YKHMDGYEFNDGDDEDTPMWSRYYNLFYTKRGKLQVNISQQLGEYGSFYLSGSQQTYWHT DQQDRLLQFGYNTQIKDLSLGVSWNYSKSRGQPDADQVFALNFSLPLNLLLPRSNDSYTR KKNYAWMTSNTSIDNEGHITQNLGLTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKG AFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVAN STGLKTDWRGYTVVPYATSYRENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAH AGARVLMKTSKQGIPLRFGAIATLDGIQTNSGIIDDDGSLYMSGLPAQGAITVRWGEAPD QICHISYQLTEQQINSAITRMDAICR >gi|299856426|gb|ADWV01000025.1| GENE 15 17790 - 18833 329 347 aa, chain + ## HITS:1 COG:ycbT KEGG:ns NR:ns ## COG: ycbT COG3539 # Protein_GI_number: 16128908 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 3 347 12 356 356 686 98.0 0 MLLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEENTAGVVKDKFYQ WNESNDYYVSCDCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLLQVKGSSPTA VPFENVGTGADTRWHICDPGGQRLGGQGASGNSGSFSLKILQPFVGSVVIPPMALARLFE CYNIPAGDSCTTTGTSVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAANFRVVGHKPL GARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVTDSQNNIISP AGGTLPLSIPDDADSIARMNVYPVSTTGVPPETGRFEATATVRINFD >gi|299856426|gb|ADWV01000025.1| GENE 16 18911 - 19387 242 158 aa, chain + ## HITS:1 COG:ycbU KEGG:ns NR:ns ## COG: ycbU COG3539 # Protein_GI_number: 16128909 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 158 23 180 180 288 100.0 4e-78 MAGPEQVSMHIYGNVVDQGCDVATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGC AAGITGADVLFSGEADTLAPTLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLT PLKAGDNTLKYQLRYKSTKAGATGGNATAVLYFDLVYQ >gi|299856426|gb|ADWV01000025.1| GENE 17 19395 - 19910 227 171 aa, chain + ## HITS:1 COG:ECs1027 KEGG:ns NR:ns ## COG: ECs1027 COG3539 # Protein_GI_number: 15830281 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 171 17 187 187 340 99.0 8e-94 MLKRIIWILFLLGLTGGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFF HGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDA KILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD >gi|299856426|gb|ADWV01000025.1| GENE 18 20221 - 20613 194 130 aa, chain + ## HITS:1 COG:ycbF KEGG:ns NR:ns ## COG: ycbF COG3121 # Protein_GI_number: 16128911 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 130 116 245 245 257 97.0 3e-69 MPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNS QGVQLTNPTPYYINLIQLSVNGKALSNAGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGG LSAKKEQNLP >gi|299856426|gb|ADWV01000025.1| GENE 19 20571 - 20780 156 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|213615837|ref|ZP_03371663.1| ## NR: gi|213615837|ref|ZP_03371663.1| hypothetical protein SentesTyp_15729 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] # 1 44 1 44 45 81 88.0 2e-14 MSALWIELEKGFTNEGVVHELSWIPGVQTGGVLCASSDQKGIDLRQKKRKRFPNLFQGRF CSFFALNPP >gi|299856426|gb|ADWV01000025.1| GENE 20 20724 - 21734 918 336 aa, chain + ## HITS:1 COG:ECs1029 KEGG:ns NR:ns ## COG: ECs1029 COG0167 # Protein_GI_number: 15830283 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 336 1 336 336 679 100.0 0 MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPAKPVNCMGLTFKNPLGL AAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGV DNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPG LRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNID GVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDS VIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVTHI >gi|299856426|gb|ADWV01000025.1| GENE 21 21908 - 22450 525 180 aa, chain + ## HITS:1 COG:no KEGG:SSON_0950 NR:ns ## KEGG: SSON_0950 # Name: ycbW # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 180 13 192 192 374 100.0 1e-102 MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSF EEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDT HEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV >gi|299856426|gb|ADWV01000025.1| GENE 22 22505 - 23557 686 350 aa, chain - ## HITS:1 COG:ycbX_1 KEGG:ns NR:ns ## COG: ycbX_1 COG3217 # Protein_GI_number: 16128914 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein # Organism: Escherichia coli K12 # 1 273 1 273 273 563 99.0 1e-160 MATLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGTFITARQFPQMVRFTPS PVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQL RWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGA SAWEEDSWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGD VDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAAADDTANITQQPDANVDIDWQGQAF RGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQLLEGEVTPLKKISNGR >gi|299856426|gb|ADWV01000025.1| GENE 23 23801 - 25909 178 702 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 487 667 174 328 396 73 29 3e-12 MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLP LGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAF TRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAA IVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVK AEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPK GPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRAD KQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYANRLRKNLKKFEKWARQEGIECYRL YDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLK TRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGK DFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA WLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG FRMDLDGLAKLGLKAQEITQKTLSQDFARNHQIHNCWLITAA >gi|299856426|gb|ADWV01000025.1| GENE 24 25921 - 27828 2332 635 aa, chain + ## HITS:1 COG:ECs1033 KEGG:ns NR:ns ## COG: ECs1033 COG0488 # Protein_GI_number: 15830287 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Escherichia coli O157:H7 # 1 635 1 635 635 1183 99.0 0 MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRI IYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNEL AKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGGWLRKAALGRALVSNPRVLLL DEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRNMATRIVDLDRGKLVTYPGNYDQ YLQEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKAMRRERGERRE VMGTAKMQVEEASRSGKIVFEMEDVCYQVNGKQLVKDFSAQVLRGDKIALIGPNGCGKTT LLKLMLGQLQADSGRIHVGTKLEVAYFDQHRAELDPDKTVMDNLAEGKQEVMVNGKPRHV LGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLE ELIDSYQGTVLLVSHDRQFVDNTVTECWIFEGGGKIGRYVGGYHDARGQQEQYVALKQPA VKKTEEAAAAKAETVKRSSSKLSYKLQRELEQLPQLLEDLEAKLEALQTQVADASFFSQP HEQTQKVLADMAAAEQELEQAFERWEYLEALKNGG >gi|299856426|gb|ADWV01000025.1| GENE 25 27958 - 29211 615 417 aa, chain + ## HITS:1 COG:pqiA KEGG:ns NR:ns ## COG: pqiA COG2995 # Protein_GI_number: 16128917 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Escherichia coli K12 # 1 417 1 417 417 790 100.0 0 MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAWDAPRQRPTAYALAALF MLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTFFLLFVQLVPAFCLITILL LVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFVKLMAYGSIGVGSSFLPWCLF CVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIRQGLRSCSCCTAILPADEPVCPR CSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIMVTDLLGSKMPSTILAGVILLWSEG SYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHGKRDSERMHLIYEVVEFVGRWSMIDVF VIAVLSALVRMGGLMSIYPAMGALMFALVVIMTMFSAMTFDPRLSWDRQPESEHEES >gi|299856426|gb|ADWV01000025.1| GENE 26 29216 - 30856 1503 546 aa, chain + ## HITS:1 COG:pqiB KEGG:ns NR:ns ## COG: pqiB COG3008 # Protein_GI_number: 16128918 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Escherichia coli K12 # 1 546 1 546 546 1082 100.0 0 MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPEVTLITANAEGIEGGKT TIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDTVFWVVKPQIGREGISGLG TLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRVILDSKKAGQLSPGDPVLFRG YRVGSVETSTFDTQKRNISYQLFINAPYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSL TTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQ PGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHL GELLKRGLRGSLKTGNLVTGALYVDLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQR LMEALDKINKLPLNPMIEQATSTLSESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQST LRELNRSMQGFQPGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKDPE PKRAKQ >gi|299856426|gb|ADWV01000025.1| GENE 27 30853 - 31416 686 187 aa, chain + ## HITS:1 COG:ymbA KEGG:ns NR:ns ## COG: ymbA COG3009 # Protein_GI_number: 16128919 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 6 187 1 182 182 338 99.0 3e-93 MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGN GVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQDTLNVTV TEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDGYDEMVKVLAGVWSQEAASIA QEIKRLP >gi|299856426|gb|ADWV01000025.1| GENE 28 31672 - 31839 77 55 aa, chain + ## HITS:1 COG:ECs1037 KEGG:ns NR:ns ## COG: ECs1037 COG3130 # Protein_GI_number: 15830291 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome modulation factor # Organism: Escherichia coli O157:H7 # 1 55 1 55 55 80 100.0 5e-16 MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGWREAMADRVVMA >gi|299856426|gb|ADWV01000025.1| GENE 29 31909 - 32427 749 172 aa, chain - ## HITS:1 COG:ECs1038 KEGG:ns NR:ns ## COG: ECs1038 COG0764 # Protein_GI_number: 15830292 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Escherichia coli O157:H7 # 1 172 1 172 172 344 100.0 4e-95 MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELD INPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLP TAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDLKVGLFQDTSAF >gi|299856426|gb|ADWV01000025.1| GENE 30 32496 - 34256 1631 586 aa, chain - ## HITS:1 COG:ECs1039 KEGG:ns NR:ns ## COG: ECs1039 COG1067 # Protein_GI_number: 15830293 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent protease # Organism: Escherichia coli O157:H7 # 1 586 1 586 586 1167 100.0 0 MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQFALEQLLHTRASSSFML AKAPEESEYLNLIANAARTLQSDAGQLVGGHYEVSGHSIRLRHAVSADDNFATLTQVVAA DWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRTLLAQPLLWMRLKNIVNRERF DWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEMEPELSEQAIYSEFEDTLQIVD AESVTQWCRWVTFTARHNHLPAPGADAWPVLIREAARYTGEQETLPLSPQWILRQCKEVA SLCDGDTFSGEQLNLMLQQREWREGFLAERMQDEILQEQILIETEGERIGQINALSVIEF PGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKGMMIMQAFLMSELQLEQQIP FSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIAITGSVDQFGRAQPVGGLNE KIEGFFAICQQRELTGKQGVIIPTANVRHLSLHSELVKAVEEGKFTIWAVDDVTDALPLL LNLVWDGEGQTTLMQTIQERIAQASQQEGRHRFPWPLRWLNWFIPN >gi|299856426|gb|ADWV01000025.1| GENE 31 34442 - 34894 475 150 aa, chain + ## HITS:1 COG:ECs1040 KEGG:ns NR:ns ## COG: ECs1040 COG3120 # Protein_GI_number: 15830294 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 150 1 150 150 253 100.0 9e-68 MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENEPVLVNGWIDK HMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIV QLIEDAENKEKYANKMSSLKQDLQALLGKE >gi|299856426|gb|ADWV01000025.1| GENE 32 34970 - 36010 1185 346 aa, chain - ## HITS:1 COG:ECs1041 KEGG:ns NR:ns ## COG: ECs1041 COG2885 # Protein_GI_number: 15830295 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli O157:H7 # 1 346 1 346 346 658 100.0 0 MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFINNNGPTHENQLGAGA FGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGG MVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDAHTIGTRPDN GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDVVTQPQA >gi|299856426|gb|ADWV01000025.1| GENE 33 36368 - 36877 311 169 aa, chain - ## HITS:1 COG:ECs1042 KEGG:ns NR:ns ## COG: ECs1042 COG5404 # Protein_GI_number: 15830296 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: SOS-response cell division inhibitor, blocks FtsZ ring formation # Organism: Escherichia coli O157:H7 # 1 169 1 169 169 269 100.0 2e-72 MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPMMTQLLLLPLLQQLGQQ SRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVESMVRALRTGNYSVVIGWLA DDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSGLKIHSNLYH >gi|299856426|gb|ADWV01000025.1| GENE 34 37096 - 37725 514 209 aa, chain + ## HITS:1 COG:yccR KEGG:ns NR:ns ## COG: yccR COG3070 # Protein_GI_number: 16128926 # Func_class: K Transcription # Function: Regulator of competence-specific genes # Organism: Escherichia coli K12 # 1 209 1 209 209 405 99.0 1e-113 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLSVDDTVFAMVSDGELYLRACEQSAQYC VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE AALPVARRQELAEWADSLTPKQEFPAELE >gi|299856426|gb|ADWV01000025.1| GENE 35 37688 - 39850 1834 720 aa, chain - ## HITS:1 COG:ECs1044 KEGG:ns NR:ns ## COG: ECs1044 COG1289 # Protein_GI_number: 15830298 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 720 1 720 720 1427 99.0 0 MAFMLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLTIPLTLGMVAAALTDLD DRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLSTSGFILLGGLGQRYATIAF GALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIGHLLFPVRPLQDNLARCYEQL ARYLELKSRMFDPDIEDESQAPLYDLALANGLLMATLNQTKLSLLTRLRGDRGQRGTRRT LHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFRFQRLMSMQGQACQQLSRCILLRQP YQHDPHFERAFTHIDAALERMRDNGAPADLLKTLGFLLNNLRAIDAQLATIESEQAQALP HNNDENELADDSPHGLSDIWLRLSRHFTPESALFRHAIRMSLVLCFGYAIIQITGMHHGY WILLTSLFVCQPNYNATRHRLKLRIIGTLVGIAIGIPVLWFVPSLEGQLVLLVITGVLFF AFRNVQYAHATMFITLLVLLCFNLLGEGFEVALPRVIDTLIGCAIAWAAVSYIWPDWQFR NLPRMLERATEANCRYLDAILEQYHQGRDNRLAYRIARRDAHNRDAELASVVSNMSSEPN VTPQIREAAFRLLCLNHTFTSYISALGAHREQLTNPEILAFLDEAVCYVDDALHHQPADE ERVNEALASLKQRMQQLEPRADSKEPLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA >gi|299856426|gb|ADWV01000025.1| GENE 36 39860 - 40306 510 148 aa, chain - ## HITS:1 COG:yccF KEGG:ns NR:ns ## COG: yccF COG3304 # Protein_GI_number: 16128928 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 134 1 134 148 238 99.0 3e-63 MRTVLNILNFVLGGFATTLGWLLATLVSIMLIFTLPLTRSCWEITKLSLVPYGNEAIHVD ELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQCISIIGIPVGIANFKIAAI ALWPVGRRVVSVETAQAAREANARRRFE >gi|299856426|gb|ADWV01000025.1| GENE 37 40411 - 42483 1809 690 aa, chain + ## HITS:1 COG:helD KEGG:ns NR:ns ## COG: helD COG0210 # Protein_GI_number: 16128929 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Escherichia coli K12 # 7 690 1 684 684 1338 99.0 0 MWIYRVMELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVW GELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWQRWSGEMSEIASGVLRQQLDLIATRT GENKWLTREQTSGVQQQIRQAMSALPLPVNRLEEFDNCREAWRKCQAWLKDIESARLQHN QAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLL ARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFHALALHIIQQGSKKVPIVS KLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLAS RLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGL IHQAIVILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYR FSGAQMSLTTAFHENFGEGDRCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPLNSLTNGD EKAVTLLDESQLDALLDKLSGYAKPEERILILARYHHMRPASLEKAATRWPKLQIDFMTI HASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMYVALTRAR HRVWALFNKENPSPFVEILKNLDVPVARKP >gi|299856426|gb|ADWV01000025.1| GENE 38 42515 - 42982 406 155 aa, chain - ## HITS:1 COG:ECs1047 KEGG:ns NR:ns ## COG: ECs1047 COG1803 # Protein_GI_number: 15830301 # Func_class: G Carbohydrate transport and metabolism # Function: Methylglyoxal synthase # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 313 100.0 9e-86 MYIMELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGTTGNLISRATG MNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVA TNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK >gi|299856426|gb|ADWV01000025.1| GENE 39 43069 - 43731 579 220 aa, chain - ## HITS:1 COG:ECs1048 KEGG:ns NR:ns ## COG: ECs1048 COG3110 # Protein_GI_number: 15830302 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 220 1 220 220 409 100.0 1e-114 MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLV FRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLENEREANHFDAAPRLELLD GDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASLPQFATMMADDSTLLSGVSEL DAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS >gi|299856426|gb|ADWV01000025.1| GENE 40 43771 - 43929 87 52 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_2154 NR:ns ## KEGG: EcSMS35_2154 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 52 5 56 56 79 100.0 3e-14 MPAISVSFIISSRLFNKVYDKADMPTMQLIRMNESKSGKYVYMLVSMIKEKF >gi|299856426|gb|ADWV01000025.1| GENE 41 43904 - 44317 614 137 aa, chain + ## HITS:1 COG:yccU KEGG:ns NR:ns ## COG: yccU COG1832 # Protein_GI_number: 16128932 # Func_class: R General function prediction only # Function: Predicted CoA-binding protein # Organism: Escherichia coli K12 # 1 137 28 164 164 268 99.0 3e-72 MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQG YGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQLGVINEQAAVLARDAGLNV VMDRCPAIEIPRLGLAK >gi|299856426|gb|ADWV01000025.1| GENE 42 44362 - 44679 396 105 aa, chain - ## HITS:1 COG:ECs1050 KEGG:ns NR:ns ## COG: ECs1050 COG3785 # Protein_GI_number: 15830304 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 105 18 122 122 200 100.0 6e-52 MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELRAAPWYHVVMEDDN GLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPRLRN >gi|299856426|gb|ADWV01000025.1| GENE 43 44737 - 45927 580 396 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 22 389 21 386 396 228 32 8e-59 MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQ IRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRF GNFLVLQLLSAGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPP ALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALM GGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD PPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDA GRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM >gi|299856426|gb|ADWV01000025.1| GENE 44 46022 - 46300 362 92 aa, chain + ## HITS:1 COG:ECs1052 KEGG:ns NR:ns ## COG: ECs1052 COG1254 # Protein_GI_number: 15830306 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Escherichia coli O157:H7 # 1 91 1 91 92 181 98.0 3e-46 MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQ WLKSGGPRSARVERVLSEPHHPSGELADFRIH >gi|299856426|gb|ADWV01000025.1| GENE 45 46297 - 46626 572 109 aa, chain - ## HITS:1 COG:ECs1053 KEGG:ns NR:ns ## COG: ECs1053 COG2920 # Protein_GI_number: 15830307 # Func_class: P Inorganic ion transport and metabolism # Function: Dissimilatory sulfite reductase (desulfoviridin), gamma subunit # Organism: Escherichia coli O157:H7 # 1 109 20 128 128 219 100.0 1e-57 MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHWEVVRFVRDFYLEFNTS PAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI >gi|299856426|gb|ADWV01000025.1| GENE 46 46717 - 47376 799 219 aa, chain - ## HITS:1 COG:yccA KEGG:ns NR:ns ## COG: yccA COG0670 # Protein_GI_number: 16128937 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Escherichia coli K12 # 1 219 1 219 219 330 100.0 8e-91 MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMY GLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGMGDVIAMALGGTALVFFCC SAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFET SNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD >gi|299856426|gb|ADWV01000025.1| GENE 47 48097 - 49215 812 372 aa, chain + ## HITS:1 COG:hyaA KEGG:ns NR:ns ## COG: hyaA COG1740 # Protein_GI_number: 16128938 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I small subunit # Organism: Escherichia coli K12 # 1 372 1 372 372 736 99.0 0 MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAWALENKPRIPVVWIHGL ECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAEEVFEDIIAQYNGKYILAV EGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTCASWGCVQAARPNPTQATPID KVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVDRMGRPLMFYGQRIHDKCYRRAH FDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACSSTRWNDGVSFPIQSGHGCLGCAEN GFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGVVAAAVGVHAVASAVDQRRRHNQQPTE TEHQPGNEDKQA >gi|299856426|gb|ADWV01000025.1| GENE 48 49212 - 51005 1756 597 aa, chain + ## HITS:1 COG:hyaB KEGG:ns NR:ns ## COG: hyaB COG0374 # Protein_GI_number: 16128939 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I large subunit # Organism: Escherichia coli K12 # 1 597 1 597 597 1276 100.0 0 MSTQYETQGYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVITNAVSCGTMFRGLEIIL QGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIKVPDNANIIRNIMLATLWCHDHL VHFYQLAGMDWIDVLDALKADPRKTSELAQSLSSWPKSSPGYFFDVQNRLKKFVEGGQLG IFRNGYWGHPQYKLPPEANLMGFAHYLEALDFQREIVKIHAVFGGKNPHPNWIVGGMPCA INIDESGAVGAVNMERLNLVQSIITRTADFINNVMIPDALAIGQFNKPWSEIGTGLSDKC VLSYGAFPDIANDFGEKSLLMPGGAVINGDFNNVLPVDLVDPQQVQEFVDHAWYRYPNDQ VGRHPFDGITDPWYNPGDVKGSDTNIQQLNEQERYSWIKAPRWRGNAMEVGPLARTLIAY HKGDAATVESVDRMMSALNLPLSGIQSTLGRILCRAHEAQWAAGKLQYFFDKLMTNLKNG NLATASTEKWEPATWPTECRGVGFTEAPRGALGHWAAIRDGKIDLYQCVVPTTWNASPRD PKGQIGAYEAALMNTKMAIPEQPLEILRTLHSFDPCLACSTHVLGDDGSELISVQVR >gi|299856426|gb|ADWV01000025.1| GENE 49 51024 - 51731 718 235 aa, chain + ## HITS:1 COG:ECs1130 KEGG:ns NR:ns ## COG: ECs1130 COG1969 # Protein_GI_number: 15830384 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I cytochrome b subunit # Organism: Escherichia coli O157:H7 # 1 235 1 235 235 431 99.0 1e-121 MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIR LIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPS ADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWMGGNSMDI HSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS >gi|299856426|gb|ADWV01000025.1| GENE 50 51728 - 52315 789 195 aa, chain + ## HITS:1 COG:hyaD KEGG:ns NR:ns ## COG: hyaD COG0680 # Protein_GI_number: 16128941 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Escherichia coli K12 # 1 195 1 195 195 360 100.0 1e-99 MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDGGTQGLNLLGYVESASH LLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSEVLALADIRGHLPAHIALV GLQPAMLDDYGGSLSELAREQLPAAEQAALAQLAAWGIVPQPANESRCLNYDCLSMENYE GVRLRQYRMTQEEQG >gi|299856426|gb|ADWV01000025.1| GENE 51 52312 - 52710 494 132 aa, chain + ## HITS:1 COG:no KEGG:ECO111_1087 NR:ns ## KEGG: ECO111_1087 # Name: hyaE # Def: hydrogenase-1 operon protein HyaE # Organism: E.coli_O111_H- # Pathway: not_defined # 1 132 1 132 132 259 100.0 2e-68 MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVLLLSSDPKRTPEVSDNPVMIGE LLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLVFTGGNYRGVLNGIHPWAELINLM RGLVEPQQERAS >gi|299856426|gb|ADWV01000025.1| GENE 52 52707 - 53564 621 285 aa, chain + ## HITS:1 COG:no KEGG:B21_00987 NR:ns ## KEGG: B21_00987 # Name: hyaF # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 285 1 285 285 556 100.0 1e-157 MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCAHSPQVIALLNELQHQL SERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQADDSESEIQEAIFCGLWRV RRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPPIDGLMNGLPLAHELLAHVRN PDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIGYGESYINATGLRHVWHLRCTDT LKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVCQWLAEAAPT >gi|299856426|gb|ADWV01000025.1| GENE 53 53698 - 55242 1616 514 aa, chain + ## HITS:1 COG:ECs1134 KEGG:ns NR:ns ## COG: ECs1134 COG1271 # Protein_GI_number: 15830388 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Escherichia coli O157:H7 # 1 514 1 514 514 964 99.0 0 MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAITETIYVVTGKTIYRDMTRFWGKLFG INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERDVALRSFAIGSVFGTLAIIGTLQLGDS SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFAIKIPALLGILATHSL DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRELEGDLGYGMLLSRY APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHR WVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVG LYTLFLIAEVYLMQKYARLGPSAMQSEQPTQQQG >gi|299856426|gb|ADWV01000025.1| GENE 54 55254 - 56390 1045 378 aa, chain + ## HITS:1 COG:appB KEGG:ns NR:ns ## COG: appB COG1294 # Protein_GI_number: 16128945 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Escherichia coli K12 # 1 378 1 378 378 666 100.0 0 MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDDERRIVINSVGAHWEGN QVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPLAFDYRGKIADARWRKMWD AGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGSFWQLLTPFPLLCGLLSLGMV ILQGGVWLQLKTVGVIHLRSQLATKRAALLVMLCFLLAGYWLWVGIDGFVLLAQDANGPS NPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPLLTVMAIYRGRPGWGFLMASLMQFG VIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQLTLSIMLVIVLIFLPIVLLYTLWSYYK MWGRMTTETLRRNENELY >gi|299856426|gb|ADWV01000025.1| GENE 55 56403 - 56495 60 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWYLLWFVGILLMCSLSTLVLVWLDPRLKS >gi|299856426|gb|ADWV01000025.1| GENE 56 56575 - 57873 732 432 aa, chain + ## HITS:1 COG:no KEGG:B21_00990 NR:ns ## KEGG: B21_00990 # Name: appA # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: gamma-Hexachlorocyclohexane degradation [PATH:ebl00361]; Inositol phosphate metabolism [PATH:ebl00562]; Riboflavin metabolism [PATH:ebl00740] # 1 432 1 432 432 838 99.0 0 MKAILIPFLSLLIPLTPQSAFAQSEPELKLESVVIVSRHGVRAPTKATQLMQDVTPDAWP TWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQSGQVAIIADVDERTRKTGE AFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGH RQTAFRELERVLNFPQSNLCLKREKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLT EIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIMAA LTPHPPQKQADGVTLPTSVLFIAGHDTNLANLGGALELNWTLPGQPDNTPPGGELVFERW RRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNTPPGEVKLTLAGCEERNAQGMCSLAGFTQ IVNEARIPACSL >gi|299856426|gb|ADWV01000025.1| GENE 57 57988 - 60168 2289 726 aa, chain - ## HITS:1 COG:yccC_1 KEGG:ns NR:ns ## COG: yccC_1 COG3206 # Protein_GI_number: 16128947 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in exopolysaccharide biosynthesis # Organism: Escherichia coli K12 # 1 480 1 480 480 892 100.0 0 MTTKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLIAVAYSLLSTPIYQADT LVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGKTIAELNLRDIVEQKYFPI VGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGENGHYTLEGEEFTVNGMVGQRL EKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETFTVSERSKESGMLELTMTGDDPQ LITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQLPEVRSELDQAEEKLNVYRQQRDSV DLNLEAKAVLEQIVNVDNQLNELTFREAEISQLYKKDHPTYRALLEKRQTLEQERKRLNK RVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNRQQELSISKSSAIGNVRIIDPAVTQPQPV KPKKALNVVLGFILGLFISVGAVLARAMLRRGVEAPEQLEEHGISVYATIPMSEWLDKRT RLRKKNLFSNQQRHRTKNIPFLAVDNPADSAVEAVRALRTSLHFAMMETENNILMITGAT PDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKV IQHFGKGGFDVITRGQVPPNPSELLMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVV GRSVGTSLLVARFGLNTAKEVSLSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGY SYSEKE >gi|299856426|gb|ADWV01000025.1| GENE 58 60188 - 60634 437 148 aa, chain - ## HITS:1 COG:ECs1138 KEGG:ns NR:ns ## COG: ECs1138 COG0394 # Protein_GI_number: 15830392 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Escherichia coli O157:H7 # 1 148 5 152 152 276 100.0 1e-74 MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGLVKHPADATAADVAANH GVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVRGKTMLFGQWLEQKEIPDP YRKSQDAFEHVYGMLERASQEWAKRLSR >gi|299856426|gb|ADWV01000025.1| GENE 59 60622 - 61761 917 379 aa, chain - ## HITS:1 COG:ECs1139 KEGG:ns NR:ns ## COG: ECs1139 COG1596 # Protein_GI_number: 15830393 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Escherichia coli O157:H7 # 1 379 1 379 379 744 100.0 0 MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQYDLDKMVNIYPVTPGLI DQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWV NADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQVDVSVAAFRSQKAYVTGEVS KSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRGDLRQNKL LHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFV IRATQNKQNGKIANIYQLNAKDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPT ISGVHDLTETSRWIQTWPN >gi|299856426|gb|ADWV01000025.1| GENE 60 61807 - 63903 1872 698 aa, chain - ## HITS:1 COG:no KEGG:ECO111_1095 NR:ns ## KEGG: ECO111_1095 # Name: ymcA # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 698 1 698 698 1417 100.0 0 MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQMPNARIAPEGEFSVNY RDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGDQSYKDKSFDFKLRLWEEG YWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMAWGYAGNAGNITNPFCRVSDK YCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPLRLKLEYDGNNYQNDFAGKLPQA SHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTNFNDLRPALRDTPKPAYQPAPESEG LQYTTVANQLTALKYNAGFEAPEIQLRDKTLYMSGQQYKYRDSREAVDRANRILVNNLPQ GVEKISVTQKREHMAMVTTETDVASLRKQLAGTAPGQSEQLQQQRVEAEDLSAFGRGYRI REDRFSYSFNPTLSQSLGGPEDFYMFQLGLMSSARYWFTDHLLLDGGIFTNIYNNYDKFK SSLLPADSTLPRVRTHIRDYVRNDVYLNNLQANYFADLGNGFYGQVYGGYLETMYAGVGS ELLYRPLDASWALGVDVNYVKQRDWDNMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVG QYLAKDKGATIDVAKRFDSGVAVGVWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPN RNRAVVSWTPLTRDGGQMLSRKYQLYPMTAEREVPVGQ >gi|299856426|gb|ADWV01000025.1| GENE 61 63903 - 64604 443 233 aa, chain - ## HITS:1 COG:no KEGG:JW0968 NR:ns ## KEGG: JW0968 # Name: ymcB # Def: conserved hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 233 16 248 248 442 100.0 1e-123 MTPHAFAQGTVTIYLPGEQQTLSVGPVENVVQLVTQPQLRDRLWWPGALLTDSAAKAKAL KDYQHVMAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPL VGDYTLYTVQRPVTITLLGAVSGAGQLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEG ETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPD >gi|299856426|gb|ADWV01000025.1| GENE 62 64646 - 64870 71 74 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1094 NR:ns ## KEGG: EC55989_1094 # Name: ymcC # Def: putative outer membrane lipoprotein # Organism: E.coli_55989 # Pathway: not_defined # 1 74 141 214 214 148 98.0 7e-35 VSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGA GVIPVEMTFLKPAP Prediction of potential genes in microbial genomes Time: Sun May 15 15:47:25 2011 Seq name: gi|299856425|gb|ADWV01000026.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont25.1, whole genome shotgun sequence Length of sequence - 61497 bp Number of predicted genes - 59, with homology - 56 Number of transcription units - 35, operones - 12 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 347 - 477 98.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. - Term 525 - 569 3.2 1 1 Op 1 11/0.000 - CDS 580 - 1107 454 ## COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein 2 1 Op 2 . - CDS 1089 - 1673 419 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A - Prom 1698 - 1757 2.9 + Prom 1445 - 1504 1.9 3 2 Tu 1 . + CDS 1743 - 2012 391 ## COG3084 Uncharacterized protein conserved in bacteria + Prom 2033 - 2092 1.9 4 3 Op 1 5/0.214 + CDS 2137 - 3075 667 ## COG2334 Putative homoserine kinase type II (protein kinase fold) 5 3 Op 2 1/0.857 + CDS 3092 - 3718 769 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 3740 - 3769 2.1 + Prom 3720 - 3779 10.7 6 4 Tu 1 . + CDS 3873 - 5303 1104 ## COG5339 Uncharacterized protein conserved in bacteria + Term 5309 - 5352 1.5 - Term 5297 - 5340 9.1 7 5 Tu 1 . - CDS 5344 - 6087 624 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Prom 6351 - 6410 4.5 8 6 Tu 1 . + CDS 6640 - 9426 3380 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains + Term 9650 - 9687 9.4 9 7 Tu 1 . - CDS 9808 - 10404 719 ## COG0218 Predicted GTPase - Prom 10579 - 10638 5.1 + Prom 10923 - 10982 3.9 10 8 Tu 1 . + CDS 11022 - 11531 600 ## COG3078 Uncharacterized protein conserved in bacteria + Prom 11560 - 11619 2.1 11 9 Tu 1 . + CDS 11720 - 13093 1676 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Term 13148 - 13185 2.2 12 10 Tu 1 . - CDS 13283 - 13393 94 ## - Prom 13414 - 13473 2.9 13 11 Op 1 14/0.000 - CDS 13505 - 14914 1542 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 14 11 Op 2 5/0.214 - CDS 14926 - 15975 1129 ## COG3852 Signal transduction histidine kinase, nitrogen specific - Prom 16006 - 16065 5.2 - Term 16219 - 16263 -0.7 15 12 Tu 1 . - CDS 16294 - 17703 1675 ## COG0174 Glutamine synthetase + Prom 17782 - 17841 5.8 16 13 Tu 1 . + CDS 18076 - 19899 2218 ## COG1217 Predicted membrane GTPase involved in stress response + Term 19923 - 19952 2.1 + Prom 19975 - 20034 7.8 17 14 Op 1 . + CDS 20116 - 20826 444 ## COG2188 Transcriptional regulators 18 14 Op 2 . + CDS 20834 - 21814 737 ## JW3844 predicted sugar phosphate isomerase + Prom 21819 - 21878 2.3 19 15 Tu 1 . + CDS 21916 - 23181 1019 ## COG0477 Permeases of the major facilitator superfamily + Term 23254 - 23287 2.1 - Term 23242 - 23273 2.5 20 16 Op 1 3/0.500 - CDS 23292 - 24080 536 ## COG1349 Transcriptional regulators of sugar metabolism 21 16 Op 2 . - CDS 24120 - 25016 657 ## COG0524 Sugar kinases, ribokinase family - Prom 25069 - 25128 3.5 + Prom 24967 - 25026 3.4 22 17 Op 1 4/0.357 + CDS 25189 - 26067 808 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 23 17 Op 2 . + CDS 26092 - 26979 715 ## COG3684 Tagatose-1,6-bisphosphate aldolase 24 17 Op 3 7/0.143 + CDS 27012 - 28022 683 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 25 17 Op 4 21/0.000 + CDS 28092 - 29525 774 ## COG0477 Permeases of the major facilitator superfamily + Term 29531 - 29568 7.0 26 17 Op 5 2/0.643 + CDS 29624 - 30973 1005 ## COG0477 Permeases of the major facilitator superfamily 27 17 Op 6 . + CDS 30963 - 31850 459 ## COG2017 Galactose mutarotase and related enzymes + Prom 31908 - 31967 2.2 28 18 Op 1 2/0.643 + CDS 31991 - 32590 783 ## COG1011 Predicted hydrolase (HAD superfamily) 29 18 Op 2 7/0.143 + CDS 32584 - 33456 810 ## COG1295 Predicted membrane protein 30 18 Op 3 5/0.214 + CDS 33453 - 33890 463 ## COG1490 D-Tyr-tRNAtyr deacylase 31 18 Op 4 . + CDS 33935 - 34876 1125 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 32 19 Tu 1 . - CDS 34940 - 35848 352 ## COG0657 Esterase/lipase + Prom 35837 - 35896 2.2 33 20 Op 1 1/0.857 + CDS 36077 - 36388 63 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system 34 20 Op 2 . + CDS 36389 - 36679 283 ## COG2944 Predicted transcriptional regulator 35 20 Op 3 . + CDS 36765 - 36857 91 ## + Term 36864 - 36896 1.1 + Prom 37011 - 37070 8.5 36 21 Tu 1 . + CDS 37265 - 37483 119 ## SFV_3606 hypothetical protein + Prom 37515 - 37574 4.8 37 22 Tu 1 . + CDS 37702 - 37944 161 ## SSON_4059 hypothetical protein 38 23 Op 1 9/0.000 - CDS 38274 - 39203 1057 ## COG3058 Uncharacterized protein involved in formate dehydrogenase formation 39 23 Op 2 12/0.000 - CDS 39200 - 39835 557 ## COG2864 Cytochrome b subunit of formate dehydrogenase 40 23 Op 3 16/0.000 - CDS 39832 - 40734 995 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 41 23 Op 4 5/0.214 - CDS 40747 - 43161 2832 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 42 23 Op 5 . - CDS 43210 - 43797 533 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 44014 - 44073 4.7 + Prom 43787 - 43846 4.4 43 24 Tu 1 . + CDS 43991 - 44824 599 ## COG1526 Uncharacterized protein required for formate dehydrogenase activity + Term 44831 - 44877 8.4 + Prom 44835 - 44894 9.8 44 25 Tu 1 . + CDS 44977 - 46017 940 ## EcE24377A_4426 putative lipoprotein - Term 46025 - 46063 9.3 45 26 Op 1 3/0.500 - CDS 46067 - 47815 1198 ## COG3711 Transcriptional antiterminator 46 26 Op 2 2/0.643 - CDS 47815 - 48885 1158 ## COG1363 Cellulase M and related proteins 47 26 Op 3 7/0.143 - CDS 48875 - 50326 1565 ## COG1299 Phosphotransferase system, fructose-specific IIC component 48 26 Op 4 1/0.857 - CDS 50337 - 50783 362 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 50974 - 51033 5.1 - Term 51040 - 51075 7.4 49 27 Op 1 4/0.357 - CDS 51084 - 51398 380 ## COG3254 Uncharacterized conserved protein 50 27 Op 2 5/0.214 - CDS 51408 - 52232 991 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - Prom 52398 - 52457 2.2 51 28 Op 1 6/0.143 - CDS 52474 - 53733 1399 ## COG4806 L-rhamnose isomerase 52 28 Op 2 . - CDS 53730 - 55199 1421 ## COG1070 Sugar (pentulose and hexulose) kinases - Prom 55257 - 55316 2.4 53 29 Tu 1 . + CDS 55487 - 56323 495 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 56158 - 56213 1.1 54 30 Tu 1 . - CDS 56271 - 56405 90 ## - Prom 56643 - 56702 2.9 55 31 Tu 1 . + CDS 56397 - 57245 603 ## COG2207 AraC-type DNA-binding domain-containing proteins 56 32 Tu 1 . - CDS 57242 - 58276 1293 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 58448 - 58507 6.4 + Prom 58451 - 58510 7.2 57 33 Tu 1 . + CDS 58561 - 59181 573 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 59236 - 59272 6.4 + Prom 59251 - 59310 7.3 58 34 Tu 1 . + CDS 59435 - 60424 971 ## ECSE_4198 2-keto-3-deoxygluconate permease + Term 60443 - 60487 8.0 + Prom 60478 - 60537 3.7 59 35 Tu 1 . + CDS 60573 - 61247 604 ## COG2258 Uncharacterized protein conserved in bacteria + Term 61325 - 61355 3.0 Predicted protein(s) >gi|299856425|gb|ADWV01000026.1| GENE 1 580 - 1107 454 175 aa, chain - ## HITS:1 COG:mobB KEGG:ns NR:ns ## COG: mobB COG1763 # Protein_GI_number: 16131697 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein # Organism: Escherichia coli K12 # 6 175 1 170 170 332 99.0 2e-91 MAGKTMIPLLAFAAWSGTGKTTLLKQLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYEL RKAGAAQTIVASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVL FRDGAGHRPEELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFVVEWMQKQNG >gi|299856425|gb|ADWV01000026.1| GENE 2 1089 - 1673 419 194 aa, chain - ## HITS:1 COG:mobA KEGG:ns NR:ns ## COG: mobA COG0746 # Protein_GI_number: 16131698 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Escherichia coli K12 # 1 194 1 194 194 394 97.0 1e-110 MNLMTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEI YQASGLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPEDLAARLNHQRKDA PVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMAFMRLAGGHAVDFSDNKDAFIN VNTPEELARWQEKR >gi|299856425|gb|ADWV01000026.1| GENE 3 1743 - 2012 391 89 aa, chain + ## HITS:1 COG:ECs4781 KEGG:ns NR:ns ## COG: ECs4781 COG3084 # Protein_GI_number: 15834035 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 89 1 89 89 158 100.0 3e-39 MKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSA KDAVIPGLQKDYEEDFKTALLRARGVIKE >gi|299856425|gb|ADWV01000026.1| GENE 4 2137 - 3075 667 312 aa, chain + ## HITS:1 COG:ECs4782 KEGG:ns NR:ns ## COG: ECs4782 COG2334 # Protein_GI_number: 15834036 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Escherichia coli O157:H7 # 1 312 17 328 328 633 99.0 0 MDALFEQGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQ LVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTG RKQLFIHRPTIGLNEYLIEPRKLFEDATLMPSGLKAAFLKATDELIAAVTAHWREDFTVL RLHGDCHAGNILWRDGPMFVDLDDARNGPAIQDLWMLLNGDKAEQRMQLETIIEAYEEFS EFDTAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKV LQEPPLQLTPMY >gi|299856425|gb|ADWV01000026.1| GENE 5 3092 - 3718 769 208 aa, chain + ## HITS:1 COG:ECs4783 KEGG:ns NR:ns ## COG: ECs4783 COG0526 # Protein_GI_number: 15834037 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 410 100.0 1e-115 MKKIWLALAGLVLAFSASAAQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLH ISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALGVEDKVTVPLFEGVQKTQT IRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQL NPQGMDTSNMDVFVQQYADTVKYLSEKK >gi|299856425|gb|ADWV01000026.1| GENE 6 3873 - 5303 1104 476 aa, chain + ## HITS:1 COG:yihF KEGG:ns NR:ns ## COG: yihF COG5339 # Protein_GI_number: 16131702 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 476 15 490 490 916 99.0 0 MIRKSATGVIVALAVIWGGGTWYTGTQIQPGVEKFIKDFNDAKKKGEHAYDMTLSYKNFD KGFFNSRFQMQMTFDNGAPDLNIKPGQKVVFDVDVEHGPLPITMLMHGNVIPALAAAKVN LVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAPAEYGKFSFGEGQFTFNGDGS SLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLARLEEKKFPVGESESKFNQINIINHG EDVAQIDAFVAKTMLDRVKDKDYINVNLTYELDKLTKGNQQLGSGEWSLIAESIDPSAVR QFIIQYNIAMQKQLAAHPELANDEVALQEVNAALFKEYLPLLQKSEPTIKQPVKWKNALG ELNANLDISIADPAKSSSSTNKDIKSLNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKRA DKQISGMMTLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH >gi|299856425|gb|ADWV01000026.1| GENE 7 5344 - 6087 624 247 aa, chain - ## HITS:1 COG:ECs4785 KEGG:ns NR:ns ## COG: ECs4785 COG0204 # Protein_GI_number: 15834039 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Escherichia coli O157:H7 # 1 247 64 310 310 517 99.0 1e-147 MYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICNHRSWADIVVLCVLFRKHIPMN KYFLKQQLAWVPFLGLACWSLDMPFMKRYSRAYLLRHPERRGKDVETTRRSCEKFRLHPT TIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIAMALNVLGKQFDKLLNVTLCYPDNNR QPFFDMLSGKLTRIVVHVDLQPIADELHGDYINDKSFKRHFQQWLNSLWQEKDRLLTSLM SSQRQDK >gi|299856425|gb|ADWV01000026.1| GENE 8 6640 - 9426 3380 928 aa, chain + ## HITS:1 COG:polA_2 KEGG:ns NR:ns ## COG: polA_2 COG0749 # Protein_GI_number: 16131704 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Escherichia coli K12 # 289 928 1 640 640 1231 100.0 0 MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAV VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT LAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNK EVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAK GAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDS LDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQN LKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKG KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRI ERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRD KGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAE RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQI HQLMENCTRLDVPLLVEVGSGENWDQAH >gi|299856425|gb|ADWV01000026.1| GENE 9 9808 - 10404 719 198 aa, chain - ## HITS:1 COG:ECs4787 KEGG:ns NR:ns ## COG: ECs4787 COG0218 # Protein_GI_number: 15834041 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 198 13 210 210 374 99.0 1e-104 MSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEW AVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQK LDTWFSEMQPVEETQDGE >gi|299856425|gb|ADWV01000026.1| GENE 10 11022 - 11531 600 169 aa, chain + ## HITS:1 COG:yihI KEGG:ns NR:ns ## COG: yihI COG3078 # Protein_GI_number: 16131706 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 169 1 169 169 211 100.0 8e-55 MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGSRAAGGNTTSGSKGQNA PKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGET LSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQEDMMRLLRGN >gi|299856425|gb|ADWV01000026.1| GENE 11 11720 - 13093 1676 457 aa, chain + ## HITS:1 COG:ECs4789 KEGG:ns NR:ns ## COG: ECs4789 COG0635 # Protein_GI_number: 15834043 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Escherichia coli O157:H7 # 1 457 3 459 459 940 100.0 0 MSVQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQAVARYPERPLSLYVHIP FCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNK AQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQR LVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVF NYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMDHFARPDDELAVA QREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYAQNQKELKQYYQQVDEQGNALWRG IALTRDDCIRRDVIKSLICNFRLDYAPIEKQWDLHFADYFAEDLKLLAPLAKDGLVDVDE KGIQVTAKGRLLIRNICMCFDTYLRQKARMQQFSRVI >gi|299856425|gb|ADWV01000026.1| GENE 12 13283 - 13393 94 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS >gi|299856425|gb|ADWV01000026.1| GENE 13 13505 - 14914 1542 469 aa, chain - ## HITS:1 COG:ECs4790 KEGG:ns NR:ns ## COG: ECs4790 COG2204 # Protein_GI_number: 15834044 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli O157:H7 # 1 469 1 469 469 915 100.0 0 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGM DGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAIS HYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHA LHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHR LNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQL ENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPDSWATLLAQWADRALRSGHQN LLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME >gi|299856425|gb|ADWV01000026.1| GENE 14 14926 - 15975 1129 349 aa, chain - ## HITS:1 COG:ECs4791 KEGG:ns NR:ns ## COG: ECs4791 COG3852 # Protein_GI_number: 15834045 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrogen specific # Organism: Escherichia coli O157:H7 # 1 349 1 349 349 658 99.0 0 MATGTQPDAGQILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFS LNIELMQESLEAGQGFTDNEVTLVLDGRSHILSVTAQRMPDGMILLEMAPMDNQRRLSQE QLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPSLLEYTKVIIEQADRLRN LVDRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQ VLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTL FYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPIRK >gi|299856425|gb|ADWV01000026.1| GENE 15 16294 - 17703 1675 469 aa, chain - ## HITS:1 COG:ECs4792 KEGG:ns NR:ns ## COG: ECs4792 COG0174 # Protein_GI_number: 15834046 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Escherichia coli O157:H7 # 1 469 1 469 469 961 100.0 0 MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKG INESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLRSTG IADTVLFGPEPEFFLFDDIRFGSSISGSHVAIDDIEGAWNSSTQYEGGNKGHRPAVKGGY FPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYK YVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLSKNGVNLFAGDKYAGLSEQALYYIG GVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVSSPKARRIEVR FPDPAANPYLCFAALLMAGLDGIKNKIHPGEAMDKNLYDLPPEEAKEIPQVAGSLEEALN ELDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV >gi|299856425|gb|ADWV01000026.1| GENE 16 18076 - 19899 2218 607 aa, chain + ## HITS:1 COG:ECs4793 KEGG:ns NR:ns ## COG: ECs4793 COG1217 # Protein_GI_number: 15834047 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Escherichia coli O157:H7 # 1 607 1 607 607 1205 100.0 0 MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKN TAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYG LKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMA EDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTII DSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPAL SVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSG RGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALG ERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDVRPGEV GQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTG KKLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRA NRAPKDD >gi|299856425|gb|ADWV01000026.1| GENE 17 20116 - 20826 444 236 aa, chain + ## HITS:1 COG:ECs4794 KEGG:ns NR:ns ## COG: ECs4794 COG2188 # Protein_GI_number: 15834048 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 236 1 236 236 475 100.0 1e-134 MAENQSTVENAKEKLDRWLKDGITTPGGKLPSERELGELLGIKRMTLRQALLNLEAESKI FRKDRKGWFVTQPRFNYSPELSASFQRAAIEQGREPSWGFTEKNRTSDIPETLAPLIAVT PSTELYRITGWGALEGHKVFYHETYINPEVAPGFIEQLENHSFSAVWEKCYQKETVVKKL IFKPVRMPGDISKYLGGSAGMPAILIEKHRADQQGNIVQIDIEYWRFEAVDLIINL >gi|299856425|gb|ADWV01000026.1| GENE 18 20834 - 21814 737 326 aa, chain + ## HITS:1 COG:no KEGG:JW3844 NR:ns ## KEGG: JW3844 # Name: yihM # Def: predicted sugar phosphate isomerase # Organism: E.coli_J # Pathway: not_defined # 1 326 1 326 326 635 100.0 0 MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGE RFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYE GNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFA NMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLIC LGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKE DAINQINHVRNVLQQIKQEANHLLNH >gi|299856425|gb|ADWV01000026.1| GENE 19 21916 - 23181 1019 421 aa, chain + ## HITS:1 COG:ECs4796 KEGG:ns NR:ns ## COG: ECs4796 COG0477 # Protein_GI_number: 15834050 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 421 1 421 421 776 99.0 0 MLTKKKWALFSLLTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGF FLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMMNWPVLLK SVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGLLGFKAGIWFYSLIVIA VGIIIFFVLNDKEEAPSVEVKKEDGASQNTSMTSVLRDKTIWLIAFNVFFVYAVYCGLTF FIPFLKNIYLLPVALVGAYGIINQYCLKMIGGPIGGMISDKILKSPSKYLCYTFIISTAA LVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFAPIGEAKIAENKTGAAMALGSFIG YAPAMFCFSLYGYILDLNPGIIGYKIVFGIMACFAFCGAVVSVMLVKRISQRKKEMLAAE A >gi|299856425|gb|ADWV01000026.1| GENE 20 23292 - 24080 536 262 aa, chain - ## HITS:1 COG:ECs4807 KEGG:ns NR:ns ## COG: ECs4807 COG1349 # Protein_GI_number: 15834061 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Escherichia coli O157:H7 # 1 260 9 268 269 357 71.0 2e-98 MSIIEVTGNPRHDQLVHLIAERGYMNIEELAQLLDVSTQTVRRDIRKLSEQGLITRHHGG AGRVSSVMNTAFEQRELSLTAEKRAIAEAVADYLPERCTVFITIGTTVEAVARALLNRRD LRIITNSLRVAQILYKNQDIEVMVPGGTLRAHNGGIIGPGAVDFIEGFRADYLITSIGAI EHDGTLLEFDVNEALVARTMIKHARNTLLVADHTKFAASAAVSIGNARNVRAFFTDAPPP NSFCQLLSEENVELVVAEQEVS >gi|299856425|gb|ADWV01000026.1| GENE 21 24120 - 25016 657 298 aa, chain - ## HITS:1 COG:yihV KEGG:ns NR:ns ## COG: yihV COG0524 # Protein_GI_number: 16131723 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli K12 # 1 297 3 299 300 381 67.0 1e-106 MTKIACVGITVQDRIYSLLTLPDGGGKYQANHYLEIGGGPAATAAVAIAKLGVEVDFIGR VGDDSCGNTLLAELEGWGVNTAFCRRYPNARSSQSAILVDQHGERIIVNYPSPDLGTDAE WLEAIDFSRYDLILADVRWHSGTEKAFSLARLAGVTTLLDADMTPQDISPLVALADHAVF STPGLKRMTGLQSPEEGLFQATTQTAGKVYVTLGSEGSLWIEDGHLCQQEAFSVNVVDTT GAGDVFHGALAVALAEKMPTKEAIRFASAVAAMKCTQPGGRAGIPNREQTESFLSLYA >gi|299856425|gb|ADWV01000026.1| GENE 22 25189 - 26067 808 292 aa, chain + ## HITS:1 COG:yihU KEGG:ns NR:ns ## COG: yihU COG2084 # Protein_GI_number: 16131722 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli K12 # 1 292 1 292 298 393 72.0 1e-109 MATIAFLGLGQMGSPMANNLLQKGHSLQVFDVNAQAVDALVTQGATAAQTPAEAAAGAEF IITMLPNGDIVRQVLLGEKGVCEAVSSDALLIDMSTIHPLQTDALIRELQEKGISMMDAP VGRTSVNAIDGTLLILAGGTDEQIARARPILMCMGNELVEAGGPGMGIRVKLINNYMSIA LNALSSEAAVLCESLGLNLDVAIKVMSGTAAGKGHFTTTWPCKVLKGDLSPAFMVDLALK DLRIAVDVARETGAPLNMGIAAESYYAAASQDGKGRQDWSALLNQVRQQAGL >gi|299856425|gb|ADWV01000026.1| GENE 23 26092 - 26979 715 295 aa, chain + ## HITS:1 COG:STM4022 KEGG:ns NR:ns ## COG: STM4022 COG3684 # Protein_GI_number: 16767287 # Func_class: G Carbohydrate transport and metabolism # Function: Tagatose-1,6-bisphosphate aldolase # Organism: Salmonella typhimurium LT2 # 8 295 4 291 292 370 67.0 1e-102 MSSHFTPFTLKDISRPGGGFAMLAVDQREAMRLMFAAAGQPKPIADSVLTDFKVAATRIL SPYASAVLADKQFCLEQIVEQGAVANSCGLIVAADLFIPGNGIPVDSVEIDMSVDPHKAR EMGAKAMKLLVLWREDEPAEERLAMVDKFVRRCRSAGLVSIIEPVVRPPRRGWDFDRESA IVAAAAELGGTEADLYKAEMPLGGKGDEKTLLAACQQLNDQMKMPWVILSSGVDADIFGR AVSIAMKGGASGFLAGRAVWASVVGAQDPQTMLRDVSVPRLQRLAEIVDEGIAQR >gi|299856425|gb|ADWV01000026.1| GENE 24 27012 - 28022 683 336 aa, chain + ## HITS:1 COG:STM1506 KEGG:ns NR:ns ## COG: STM1506 COG1063 # Protein_GI_number: 16764851 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Salmonella typhimurium LT2 # 29 334 24 338 339 134 31.0 2e-31 MDKITQVLFSDIGKVTTQYVEVPHQELKPHEVRIAPVFYGICGSDLHVLKGGHPFAKPPV VPGHEIAARVTEVGSDVKNVQPGDHVVVDPIMACMECRACKAGRFNLCEPPQVAGFRAPG FSRSQHIVPARNCHVAPASLPLKVLAFAEPAACARHCVNRMPKASLESVLVIGAGTIGLS IVQALRIMGAGKITVIEPDAAKRALALKLGAAEVWAPGELAADVRFTGAIDVVAAQATLN DACTRVYAGGTVVCMGVPSGPREIPLPMMQRFERDLLNSGMYIPEDFDAVIEWLADGRFD TSELVTDLFAIEDAAAAFERAQQNDSIKVMLQFAPE >gi|299856425|gb|ADWV01000026.1| GENE 25 28092 - 29525 774 477 aa, chain + ## HITS:1 COG:Ta1391 KEGG:ns NR:ns ## COG: Ta1391 COG0477 # Protein_GI_number: 16082368 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Thermoplasma acidophilum # 34 429 32 415 459 105 26.0 2e-22 MSQITSPATYSISRPQDVIDIVNKNSAINTSIGVIFIALGGILIDAYQAAMVGFGNKYIA AQFGISPGLAATVNASVLIAALIGGLLANRVINRFGQKRAFIIGMGLCTIGAAAVAIAPS IWWVLVCRVIMGFGLGIDFPLATNAVAELRGSTSKKTGTSVNLWQMAWYVSTTVVYLVLL PLLLSGIAEEQLWRYGIFIGAIFAVIFMILRYFFIGESAMWAARVGRYQEACDILGKRYG VQARVAASSTTEAKFSEKAENKYSGGYGILFNDRYRKRTILGCVVATMQAWQYNAVGVYL PLTLAGIISGGLTGALTGSAVVNALCGVTGGMIGSFILQRLGTRRQSMYGFAVVTLALLS LGALATTNPWLSLGLLGSIIFFHSAGPGGLGMTIATLSYPPAIRPTGVGFARAIMRTGAI AGLIFWPMLWGALKTEAFYWLAIVPFLGFLTCVLINWEPLGANVDAEDAEVLAELKK >gi|299856425|gb|ADWV01000026.1| GENE 26 29624 - 30973 1005 449 aa, chain + ## HITS:1 COG:ECs2778 KEGG:ns NR:ns ## COG: ECs2778 COG0477 # Protein_GI_number: 15832032 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 18 429 21 433 438 327 41.0 3e-89 MSEKLPAPREGLSGKAMRRVVMGSFAGALMEWYDFFIFGTAAGLVFAPLFYPDSDPFIGL IAAFATFGVGFLTRPLGGIVFGHFGDKIGRKITLIWTLAIVGCSTFLIGFIPTYQEIGIW APLILMALRLIQGFGLGGEYGGAALMTIESAPESRRGFLGSLPQTAASVGIMLATGIFAL CNHFLTSEQFLSWGWRIPFWLSAVMLIVGLFIRLHTEETLDFQKQKTTNNKEKSVPPLIE LFKKHPRNILLALGARLAESVSSNIINAFGIVYISSQLALSRDIPLTGMLIASAIGIFSC PLVGWLSDRIGQKSLYLSGAGFCVLFAFPFFLLLDSKSTLIIWCSMILGYNLGPTMMFAV QPTLFTRMFGTKVRYTGLSFAYQFSAILGGLSPLIASSLLALGGGKPWYVALFLFAVSVL SFVCVWLIEPTDEQETASYRYIREQSHEN >gi|299856425|gb|ADWV01000026.1| GENE 27 30963 - 31850 459 295 aa, chain + ## HITS:1 COG:RSc1083 KEGG:ns NR:ns ## COG: RSc1083 COG2017 # Protein_GI_number: 17545802 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Ralstonia solanacearum # 22 209 21 217 323 73 30.0 3e-13 MKTERKNEHYLALQQAFDAPWPGPVGELVTLEKGNIHLQIYPHDGARITSLKAFGSEVLR QWQPQRRAFQYGCFPMVPWAGRLGNATLNAGGQCYSLPANKPPHALHGMACYSTWEIIDK TADSLTLRMPLASPWPWQGEVIQTFLLENDALVLQLEVHSYADTFPASAGWHPWFAKKLT PQNTESLQVLFDADWQEEAGSDELPTGNRISPQAGPWDDCFGFYDGVKVKLLWPGKLAMT MISSANSLVVFDKQPDATCINPLTQAPNAINLTPELVTPDRPLVIETRWQFTPES >gi|299856425|gb|ADWV01000026.1| GENE 28 31991 - 32590 783 199 aa, chain + ## HITS:1 COG:yihX KEGG:ns NR:ns ## COG: yihX COG1011 # Protein_GI_number: 16131725 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Escherichia coli K12 # 1 199 8 206 206 414 100.0 1e-116 MLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEA LCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEE YPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGIT SILVKDKTTIPDYFAKVLC >gi|299856425|gb|ADWV01000026.1| GENE 29 32584 - 33456 810 290 aa, chain + ## HITS:1 COG:ECs4809 KEGG:ns NR:ns ## COG: ECs4809 COG1295 # Protein_GI_number: 15834063 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 528 100.0 1e-150 MLKTIQDKARHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAA FPMFSDVSIQLRHFIFANFLPATGDVIQRYIEQFVANSNKMTAVGACGLIVTALLLMYSI DSALNTIWRSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQAAEQEEDDEP >gi|299856425|gb|ADWV01000026.1| GENE 30 33453 - 33890 463 145 aa, chain + ## HITS:1 COG:ECs4810 KEGG:ns NR:ns ## COG: ECs4810 COG1490 # Protein_GI_number: 15834064 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Escherichia coli O157:H7 # 1 145 1 145 145 276 100.0 8e-75 MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEG KMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNT QTGRFAADMQVSLVNDGPVTFWLQV >gi|299856425|gb|ADWV01000026.1| GENE 31 33935 - 34876 1125 313 aa, chain + ## HITS:1 COG:ECs4811 KEGG:ns NR:ns ## COG: ECs4811 COG0454 # Protein_GI_number: 15834065 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 1 313 17 329 329 625 100.0 1e-179 MYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGSERDAWDAMAHHQMVVDEQGNLVAVGR LYINADNEASIRFMAVHPDVQDKGLGTLMAMTLESVARQEGVKRVTCSAREDAVEFFAKL GFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQLQQAWYEHIPLSEKMGVRIQ QYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLMLRERHLGGTIILADAHI RYSKPISGKPHAVADLGALSGDLDRLARGRKARVQMQVEIFGDETPGAVFEGTYIVLPAK PFGPYEEGGNEEE >gi|299856425|gb|ADWV01000026.1| GENE 32 34940 - 35848 352 302 aa, chain - ## HITS:1 COG:STM4032 KEGG:ns NR:ns ## COG: STM4032 COG0657 # Protein_GI_number: 16767297 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Salmonella typhimurium LT2 # 1 299 1 299 309 479 76.0 1e-135 MALEKGIAELVEKFIAAGRPSSRQQSIAQRREGYIASAVLAGETETRVDIQTIELEGMTL RIVSPLNAPTLLPTIIYYYGGCFVSGGFATHDNQLRQLAYYGQCRVIAVQYRLAPEHTFP AAHDDAQRGAEIVWQHAERLGVDKQRITLAGDSAGGHLALVTALRLKRAGEWQPAQLILI YPMLDATAHFESYIRNGHDYIITRDTLLSGFEMYLPGIERRHPEASPLWRDDFNGLPPVH IITAEYDPLCDEGEALYHRMTGQGVQCTCQRYLGVIHGFFQLGGISEAARSALRDVAWRA GR >gi|299856425|gb|ADWV01000026.1| GENE 33 36077 - 36388 63 103 aa, chain + ## HITS:1 COG:VCA0468 KEGG:ns NR:ns ## COG: VCA0468 COG2026 # Protein_GI_number: 15601229 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Vibrio cholerae # 2 103 4 105 110 74 41.0 5e-14 MLFIETEIFTEDVQKLLTDDEFSRFQFFLALNPDYGEVIPETGGLRKVRWVSGGKGKRAG VRVIYFHQVKHYEIRLLLIYRKGIKDDLSPQEKAMLRLLNTRW >gi|299856425|gb|ADWV01000026.1| GENE 34 36389 - 36679 283 96 aa, chain + ## HITS:1 COG:STM4033 KEGG:ns NR:ns ## COG: STM4033 COG2944 # Protein_GI_number: 16767298 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 13 94 1 82 84 135 87.0 2e-32 MDKALFERLTHSMAQMNEIIEGTRQPSRTFEVDAMKIKEIRRASGLSQSKFADLISVSVD TLRNWEQGRRSPTGPAKALLRAIANDPQHVLQALNR >gi|299856425|gb|ADWV01000026.1| GENE 35 36765 - 36857 91 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTRNRAERRHPMMRLKKLIVALMIDVNAIG >gi|299856425|gb|ADWV01000026.1| GENE 36 37265 - 37483 119 72 aa, chain + ## HITS:1 COG:no KEGG:SFV_3606 NR:ns ## KEGG: SFV_3606 # Name: yiiE # Def: hypothetical protein # Organism: S.flexneri_8401 # Pathway: not_defined # 1 72 49 120 120 133 100.0 2e-30 MAMNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQKGEV VGVDDQCKEHKE >gi|299856425|gb|ADWV01000026.1| GENE 37 37702 - 37944 161 80 aa, chain + ## HITS:1 COG:no KEGG:SSON_4059 NR:ns ## KEGG: SSON_4059 # Name: yiiF # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 80 1 80 80 141 98.0 6e-33 MNSLVGIDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPG IWQGCEEDGVEYQRKLREEW >gi|299856425|gb|ADWV01000026.1| GENE 38 38274 - 39203 1057 309 aa, chain - ## HITS:1 COG:ECs4817 KEGG:ns NR:ns ## COG: ECs4817 COG3058 # Protein_GI_number: 15834071 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in formate dehydrogenase formation # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 618 100.0 1e-177 MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLRELAENNPLGDYLRFAALI AHAQEVVLYDHPLEMDLTARIKEASAQGKPPLDIHVLPRDKHWQKLLMALIAELKPEMSG PALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFIWAALSLYWAQMANLIPGKAR AEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLCETEWHVVRVKCSNCEQSGKLHY WSLDDEQAAIKAESCDDCGTYLKILYQEKEPKVEAVADDLASLVLDARMEQEGYARSSIN PFLFPGEGE >gi|299856425|gb|ADWV01000026.1| GENE 39 39200 - 39835 557 211 aa, chain - ## HITS:1 COG:ECs4818 KEGG:ns NR:ns ## COG: ECs4818 COG2864 # Protein_GI_number: 15834072 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 390 100.0 1e-108 MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLMQIMGTPQLARILHPFV GVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVGDTGRYNFGQKCVFWAAII FLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIYAALWVKGTITA MVEGWVTSAWAKKHHPRWYREVRKTTEKKAE >gi|299856425|gb|ADWV01000026.1| GENE 40 39832 - 40734 995 300 aa, chain - ## HITS:1 COG:fdoH KEGG:ns NR:ns ## COG: fdoH COG0437 # Protein_GI_number: 16131733 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 300 1 300 300 630 100.0 1e-180 MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKACQVACSEWNDIRDTVG NNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMHCSDPGCLKACPAEGAIIQ YANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKCTLCVDRVVVGQEPACVKTCP TGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAGVGGTHVMYVLHHADKPNLYHGL PENPEISETVKFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRADEEENNLHEEKDEERK >gi|299856425|gb|ADWV01000026.1| GENE 41 40747 - 43161 2832 804 aa, chain - ## HITS:1 COG:fdoG KEGG:ns NR:ns ## COG: fdoG COG0243 # Protein_GI_number: 16131734 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 804 213 1016 1016 1682 99.0 0 MTNHWVDIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYY APIRSGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRK YDKSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCE YIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSMMKAF FGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNKNKVIGC LSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENGSIVNSGRW LQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNYAIPHEPKSEE VAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIFAGSWTPEGNQMA RRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQLLKWDGTKWTGWDIP DYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFETPLGTNPLHPNVISNPA ARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAILQPEQFVEIGESLANKLG IAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIGIPIHWGYEGVAKKGFIANTL TPFVGDANTQTPEFKSFLVNVEKV >gi|299856425|gb|ADWV01000026.1| GENE 42 43210 - 43797 533 195 aa, chain - ## HITS:1 COG:fdoG KEGG:ns NR:ns ## COG: fdoG COG0243 # Protein_GI_number: 16131734 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 195 1 195 1016 412 100.0 1e-115 MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTRETRNTCTYCSVGCGLL MYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRAPGSDK WQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLSTGMLCASASSNETGYLTQKF SRALGMLAVDNQARV >gi|299856425|gb|ADWV01000026.1| GENE 43 43991 - 44824 599 277 aa, chain + ## HITS:1 COG:ECs4821 KEGG:ns NR:ns ## COG: ECs4821 COG1526 # Protein_GI_number: 15834075 # Func_class: C Energy production and conversion # Function: Uncharacterized protein required for formate dehydrogenase activity # Organism: Escherichia coli O157:H7 # 1 277 1 277 277 572 100.0 1e-163 MKKTQQKEIENVTNITGVRQIELWRRDDLQHPRLDEVAEEVPVALVYNGISHVVMMASPK DLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSSRRFMGLKERRRALAGRTG CGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDFQPVGQLTGCTHAAAWMLPSG ELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSSRASYEMVQKSAMCGVEILFAVS AATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLSN >gi|299856425|gb|ADWV01000026.1| GENE 44 44977 - 46017 940 346 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_4426 NR:ns ## KEGG: EcE24377A_4426 # Name: not_defined # Def: putative lipoprotein # Organism: E.coli_E24377A # Pathway: not_defined # 1 346 1 346 346 619 100.0 1e-176 MKRNLLSSAIIVAIMALGLTGCDDKKAETETPPPANSQPAAPAPEAPVAKAEAKPETPAQ PVVDEQAVFDEKMDVYIKCYNKLQIPVQSSLARYADWLKDFKQGPTGEERTVYGIYGISE SNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNTINEMDKYYTQENYKDDAFAK GKTLHQTFLKNLEAFEAVAESYHAAIQEINDKRQLAELKNIEEREGKTFHYYSLAVMISA KQINNLISQEKFDVDAAMKKVSELETLVAQAKEADKGGMNFSFINSAGQYQLEAKKYVRR IRDKVPYSDWDKEQLQDANSSWMVDDSFPRALREYNEMVDDYNSLR >gi|299856425|gb|ADWV01000026.1| GENE 45 46067 - 47815 1198 582 aa, chain - ## HITS:1 COG:frvR_1 KEGG:ns NR:ns ## COG: frvR_1 COG3711 # Protein_GI_number: 16131737 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Escherichia coli K12 # 1 463 1 463 463 894 98.0 0 MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQ LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE RTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRW PLMQGDYLSSLILAIYALRNQLTDIWPQYPGNEIKQIVEQCGLFLGDNAVRTLTGLIEKQ HQQAQVISADHVLGLLQRVPGIASLNIIDTQLVENITGHLLRCLAAPVWIAEHRQSSMNN LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI ATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLEDAVNNYITVKNII TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAHPIEVNNEIINHVLIACA AADARHELKIFSYLASVLCQHPAEVIAGLTGYEAFMELLHKG >gi|299856425|gb|ADWV01000026.1| GENE 46 47815 - 48885 1158 356 aa, chain - ## HITS:1 COG:frvX KEGG:ns NR:ns ## COG: frvX COG1363 # Protein_GI_number: 16131738 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Escherichia coli K12 # 1 356 1 356 356 727 98.0 0 MNIELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGLGSFVARKGNKGPKVAVVG HMDEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHKGFKIPGVIGSVAPHALTE KQKQQPLSFDEMFIDIGANSREEAEKRGVEIGDFISPEANFACWGEDKVVGKALDNRIGC AMMAELLQTVNNPEITLYGVGSVEEEVGLRGAQTSAEHIKPDVVIVLDTAVAGDVPGIDN IKYPLKLGQGPGLMLFDKRYFPNQKLVAVLKNCAAHNDLPLQFSTMKTGATDGGRYNVMG GGRPVVALCLPTRYLHANSGMISKADYDALLTLIRDFLTTLTAEKVNAFSQFRQVD >gi|299856425|gb|ADWV01000026.1| GENE 47 48875 - 50326 1565 483 aa, chain - ## HITS:1 COG:frvB_2 KEGG:ns NR:ns ## COG: frvB_2 COG1299 # Protein_GI_number: 16131739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 129 483 1 355 355 629 100.0 1e-180 MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQGSSGVENRLSSEEIAAA DYVILATGRGLSGDDRARFAGKKVYEIAISQALKNIDQIFSELPTNSQLFAADSGVKLGK QEVQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFGLPYTDMSKGAPSFTWVVESI GYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLANDKALLGTQSGAGFLGAVVLGLAI GYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVLTYYVIGPVMSDLMGGLLHFLNTIP PSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSLLEKHIYDWYAIVGVVALMPPVAAGLA TFIAPKLFTRQEKEAASSAIVVGATVATEPAIPYALAAPLPMITANTLAGGITGVLVIAF GIKRLAPGLGIFDPLIGLMSPVGSFYLVLAIGLALNISFIIVLKGLWLRRKAKAAQQELV HEH >gi|299856425|gb|ADWV01000026.1| GENE 48 50337 - 50783 362 148 aa, chain - ## HITS:1 COG:frvA KEGG:ns NR:ns ## COG: frvA COG1762 # Protein_GI_number: 16131740 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli K12 # 1 148 1 148 148 286 97.0 1e-77 MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREKMHSTGFGSGV AVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGVPQSGEEDQVKIIGTLCRK IIHQDFIHQLQQGDADQVLALLNQTLSS >gi|299856425|gb|ADWV01000026.1| GENE 49 51084 - 51398 380 104 aa, chain - ## HITS:1 COG:yiiL KEGG:ns NR:ns ## COG: yiiL COG3254 # Protein_GI_number: 16131741 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 104 1 104 104 198 99.0 2e-51 MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFATVEIES EERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP >gi|299856425|gb|ADWV01000026.1| GENE 50 51408 - 52232 991 274 aa, chain - ## HITS:1 COG:rhaD KEGG:ns NR:ns ## COG: rhaD COG0235 # Protein_GI_number: 16131742 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Escherichia coli K12 # 1 274 1 274 274 564 98.0 1e-161 MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYKDNFHAQPRYIPLSQ PMPLLANTPFIVTGSGKFFRNVQLDPAANLGVVKVDSDGAGYHILWGLTNEAVPTSELPA HFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGV GILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSGSTLDETFGLIDTAEKSAQVLVK VYSMGGMKQTISREELIALGKRFGVTPLASALAL >gi|299856425|gb|ADWV01000026.1| GENE 51 52474 - 53733 1399 419 aa, chain - ## HITS:1 COG:rhaA KEGG:ns NR:ns ## COG: rhaA COG4806 # Protein_GI_number: 16131743 # Func_class: G Carbohydrate transport and metabolism # Function: L-rhamnose isomerase # Organism: Escherichia coli K12 # 1 419 1 419 419 847 98.0 0 MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGSLTGGIQ ATGNYPGKARNASELRTDLEQAMRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVE WAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWIDHCKASRRVSAYFGEQLGTPS VMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVG SNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVL LDDETQAIASEIVRHDLFDRVHIGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAEL RKLEAAGDYTARLALLEEQKSLSWQAVWEMYCQRHDTPTGSEWLESVRAYEKAILSQRG >gi|299856425|gb|ADWV01000026.1| GENE 52 53730 - 55199 1421 489 aa, chain - ## HITS:1 COG:ECs4831 KEGG:ns NR:ns ## COG: ECs4831 COG1070 # Protein_GI_number: 15834085 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli O157:H7 # 1 489 1 489 489 1004 98.0 0 MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFKNGLHSQNGYVTWNVDSLESAI RLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRSNGLMAQAQQQLGK RDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRLTGKMNWEYTNAT TTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTAS AVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIMGL WLLQRVLQERQINDLPALIAATQALPACRFIINPNDDRFINPEAMCSEIQAACRETAQPI PESDTELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIR VIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDSEIAHYVAQIHS TRQTKELCA >gi|299856425|gb|ADWV01000026.1| GENE 53 55487 - 56323 495 278 aa, chain + ## HITS:1 COG:rhaS KEGG:ns NR:ns ## COG: rhaS COG2207 # Protein_GI_number: 16131745 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 278 1 278 278 532 99.0 1e-151 MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGG TVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSV LQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWL EDHFADEVNWDAVAEQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVT DIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ >gi|299856425|gb|ADWV01000026.1| GENE 54 56271 - 56405 90 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRHRGYLGQRTKLIIRNMAYKYVEKIRVIAENHPVPDEYHAVTS >gi|299856425|gb|ADWV01000026.1| GENE 55 56397 - 57245 603 282 aa, chain + ## HITS:1 COG:ECs4833 KEGG:ns NR:ns ## COG: ECs4833 COG2207 # Protein_GI_number: 15834087 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 282 31 312 312 576 99.0 1e-164 MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRI TRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFSASAGQPHWRLGS VGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDK LITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHS RLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD >gi|299856425|gb|ADWV01000026.1| GENE 56 57242 - 58276 1293 344 aa, chain - ## HITS:1 COG:rhaT KEGG:ns NR:ns ## COG: rhaT COG0697 # Protein_GI_number: 16131747 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 344 1 344 344 598 97.0 1e-171 MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIVSWIILPWAISALLLPN FWTYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPI INGNFDVLINTEGGRMTLLGVLVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLVLAVM CGIFSAGMSFAINAAKPMHEAAAALGVDPLYVALPSYVIIMGGGAIINLGFCFIRLAKVK DLSLKADFSLAKPLITHNVLLSALGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYV LCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVAANIVGIGMAN >gi|299856425|gb|ADWV01000026.1| GENE 57 58561 - 59181 573 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 206 1 201 201 225 54 5e-58 MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITK LDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKA AASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQN RRPDYIKEFWNVVNWDEAAARFAAKK >gi|299856425|gb|ADWV01000026.1| GENE 58 59435 - 60424 971 329 aa, chain + ## HITS:1 COG:no KEGG:ECSE_4198 NR:ns ## KEGG: ECSE_4198 # Name: not_defined # Def: 2-keto-3-deoxygluconate permease # Organism: E.coli_SE11 # Pathway: not_defined # 1 329 13 341 341 500 99.0 1e-140 MEMQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVPILAVWFFCM GASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAM DMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPF LVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTG IPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVT SILVPILTSIWSRKVKARAAKIEILGTVK >gi|299856425|gb|ADWV01000026.1| GENE 59 60573 - 61247 604 224 aa, chain + ## HITS:1 COG:yiiM KEGG:ns NR:ns ## COG: yiiM COG2258 # Protein_GI_number: 16131750 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 224 11 234 234 462 100.0 1e-130 MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQAEKKVHGGPDRALCHY PREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPC YKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWH MPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK Prediction of potential genes in microbial genomes Time: Sun May 15 15:48:12 2011 Seq name: gi|299856424|gb|ADWV01000027.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont26.1, whole genome shotgun sequence Length of sequence - 46066 bp Number of predicted genes - 44, with homology - 42 Number of transcription units - 28, operones - 9 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 5/0.111 + CDS 38 - 235 332 ## COG0162 Tyrosyl-tRNA synthetase + Term 251 - 288 7.8 2 1 Op 2 . + CDS 297 - 1157 969 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase + Term 1167 - 1209 5.0 - Term 1150 - 1198 6.0 3 2 Tu 1 . - CDS 1201 - 1806 682 ## COG0625 Glutathione S-transferase - Prom 1827 - 1886 4.2 - Term 1854 - 1888 5.2 4 3 Tu 1 . - CDS 1912 - 3414 1563 ## COG3104 Dipeptide/tripeptide permease - Prom 3579 - 3638 4.5 5 4 Op 1 10/0.000 - CDS 4025 - 4660 654 ## COG0177 Predicted EndoIII-related endonuclease 6 4 Op 2 13/0.000 - CDS 4660 - 5355 735 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 7 4 Op 3 12/0.000 - CDS 5359 - 5979 545 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 8 4 Op 4 12/0.000 - CDS 5983 - 7041 806 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 9 4 Op 5 10/0.000 - CDS 7042 - 9072 1708 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 10 4 Op 6 12/0.000 - CDS 9065 - 9643 457 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 11 4 Op 7 . - CDS 9643 - 10224 630 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 12 4 Op 8 . - CDS 10301 - 10741 325 ## SSON_1532 hypothetical protein - Prom 10765 - 10824 4.1 13 5 Tu 1 . - CDS 10827 - 11042 264 ## G2583_2020 OriC-binding nucleoid-associated protein - Prom 11178 - 11237 3.7 - Term 11253 - 11300 6.9 14 6 Tu 1 . - CDS 11315 - 11470 86 ## EC55989_1792 beta-lactam resistance membrane protein + Prom 11570 - 11629 4.5 15 7 Tu 1 . + CDS 11683 - 12723 987 ## COG0673 Predicted dehydrogenases and related proteins + Term 12728 - 12764 8.2 - Term 12716 - 12752 8.2 16 8 Tu 1 . - CDS 12758 - 13759 1189 ## COG1816 Adenosine deaminase - Prom 13789 - 13848 7.0 - Term 13810 - 13860 7.1 17 9 Op 1 3/0.889 - CDS 13863 - 15035 945 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 18 9 Op 2 . - CDS 15045 - 16637 1520 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 16732 - 16791 5.3 + Prom 16703 - 16762 7.4 19 10 Tu 1 . + CDS 16812 - 17840 836 ## COG1609 Transcriptional regulators + Prom 17874 - 17933 2.0 20 11 Op 1 11/0.000 + CDS 17953 - 18720 245 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Prom 18868 - 18927 4.9 21 11 Op 2 2/0.889 + CDS 18952 - 19539 560 ## COG1309 Transcriptional regulator + Term 19551 - 19590 5.0 + Prom 19765 - 19824 3.7 22 12 Op 1 1/0.889 + CDS 19928 - 21739 1891 ## COG3250 Beta-galactosidase/beta-glucuronidase 23 12 Op 2 . + CDS 21736 - 23109 1454 ## COG2211 Na+/melibiose symporter and related transporters 24 12 Op 3 . + CDS 23148 - 24413 1023 ## ECSE_1736 putative outer membrane porin protein + Term 24421 - 24458 6.1 - Term 24407 - 24444 6.1 25 13 Tu 1 . - CDS 24458 - 25966 1746 ## COG5339 Uncharacterized protein conserved in bacteria - Prom 26006 - 26065 1.9 - Term 25976 - 26009 4.1 26 14 Tu 1 . - CDS 26067 - 27242 1319 ## COG1482 Phosphomannose isomerase - Prom 27285 - 27344 4.3 + Prom 27312 - 27371 5.2 27 15 Tu 1 4/0.556 + CDS 27441 - 29087 489 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase + Term 29091 - 29124 3.6 + Prom 29093 - 29152 2.3 28 16 Tu 1 . + CDS 29230 - 30633 1584 ## COG0114 Fumarase + Term 30643 - 30700 1.5 29 17 Tu 1 . - CDS 30630 - 31349 342 ## ECH74115_2321 DNA replication terminus site-binding protein - Prom 31549 - 31608 3.1 30 18 Tu 1 . + CDS 31332 - 31481 91 ## 31 19 Op 1 40/0.000 - CDS 31634 - 32935 1311 ## COG0642 Signal transduction histidine kinase 32 19 Op 2 . - CDS 32939 - 33658 586 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 33856 - 33915 4.1 + Prom 33698 - 33757 5.1 33 20 Tu 1 . + CDS 33787 - 34122 367 ## COG3136 Uncharacterized membrane protein required for alginate biosynthesis 34 21 Op 1 7/0.000 - CDS 34119 - 34841 747 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 35 21 Op 2 . - CDS 34878 - 36260 1412 ## COG0531 Amino acid transporters - Prom 36338 - 36397 4.6 - Term 36397 - 36425 1.3 36 22 Tu 1 . - CDS 36446 - 37390 976 ## EC55989_1769 hypothetical protein - Prom 37509 - 37568 5.0 + Prom 37769 - 37828 4.5 37 23 Op 1 17/0.000 + CDS 37914 - 39446 1617 ## COG3288 NAD/NADP transhydrogenase alpha subunit 38 23 Op 2 . + CDS 39457 - 40845 1480 ## COG1282 NAD/NADP transhydrogenase beta subunit + Term 40849 - 40884 7.4 39 24 Tu 1 . - CDS 40870 - 41904 1043 ## COG0628 Predicted permease - Prom 41952 - 42011 4.7 + Prom 42053 - 42112 4.5 40 25 Op 1 12/0.000 + CDS 42316 - 42681 451 ## COG2076 Membrane transporters of cations and cationic drugs 41 25 Op 2 . + CDS 42668 - 42997 480 ## COG2076 Membrane transporters of cations and cationic drugs + Term 43004 - 43039 6.4 - Term 42992 - 43027 6.4 42 26 Tu 1 . - CDS 43036 - 43857 533 ## COG3591 V8-like Glu-specific endopeptidase - Prom 43901 - 43960 3.4 43 27 Tu 1 . - CDS 44133 - 44441 261 ## - Prom 44578 - 44637 6.5 - Term 44817 - 44855 0.5 44 28 Tu 1 . - CDS 44865 - 46064 984 ## COG0477 Permeases of the major facilitator superfamily Predicted protein(s) >gi|299856424|gb|ADWV01000027.1| GENE 1 38 - 235 332 65 aa, chain + ## HITS:1 COG:ZtyrS KEGG:ns NR:ns ## COG: ZtyrS COG0162 # Protein_GI_number: 15802051 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tyrosyl-tRNA synthetase # Organism: Escherichia coli O157:H7 EDL933 # 1 65 364 428 428 139 100.0 1e-33 MQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYC LICWK >gi|299856424|gb|ADWV01000027.1| GENE 2 297 - 1157 969 286 aa, chain + ## HITS:1 COG:pdxY KEGG:ns NR:ns ## COG: pdxY COG2240 # Protein_GI_number: 16129594 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Escherichia coli K12 # 1 286 2 287 287 568 100.0 1e-162 MKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLT EIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKG CIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLV KHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGATLQ EALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAKPEHYFSATKL >gi|299856424|gb|ADWV01000027.1| GENE 3 1201 - 1806 682 201 aa, chain - ## HITS:1 COG:ECs2344 KEGG:ns NR:ns ## COG: ECs2344 COG0625 # Protein_GI_number: 15831598 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 201 1 201 201 389 100.0 1e-108 MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVNPKGQVPALLLDDG TLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIATELHKGFTPLFRPDTPEE YKPTVRAQLEKKLQYVNEALKDEHWICGQRFTIADAYLFTVLRWAYAVKLNLEGLEHIAA FMQRMAERPEVQDALSAEGLK >gi|299856424|gb|ADWV01000027.1| GENE 4 1912 - 3414 1563 500 aa, chain - ## HITS:1 COG:ydgR KEGG:ns NR:ns ## COG: ydgR COG3104 # Protein_GI_number: 16129592 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Escherichia coli K12 # 1 487 1 487 500 878 99.0 0 MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSI TLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMA AIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVNIGSFFSMIATPWLAAKYGWS VAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINYRNLLLTIIGVVALIAIATWLLH NQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLN FFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSPILAAIYNKMGDTLPMPTKFAIGMVMC SGAFLILPLGAKFASDAGIVSVSWLVASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIM GSWFLTTAGANLIGGYVAGMMAVPDNVTDPLMSLEVYGRVFLQIGVATAIIAVLMLLTAP KLHRMTQDDAADKAAKAAVA >gi|299856424|gb|ADWV01000027.1| GENE 5 4025 - 4660 654 211 aa, chain - ## HITS:1 COG:nth KEGG:ns NR:ns ## COG: nth COG0177 # Protein_GI_number: 16129591 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Escherichia coli K12 # 1 211 1 211 211 426 100.0 1e-119 MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI LHGRYTCIARKPRCGSCIIEDLCEYKEKVDI >gi|299856424|gb|ADWV01000027.1| GENE 6 4660 - 5355 735 231 aa, chain - ## HITS:1 COG:ECs2341 KEGG:ns NR:ns ## COG: ECs2341 COG4660 # Protein_GI_number: 15831595 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Escherichia coli O157:H7 # 1 231 1 231 231 395 99.0 1e-110 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGNV >gi|299856424|gb|ADWV01000027.1| GENE 7 5359 - 5979 545 206 aa, chain - ## HITS:1 COG:ydgP KEGG:ns NR:ns ## COG: ydgP COG4659 # Protein_GI_number: 16129589 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Escherichia coli K12 # 1 206 1 206 206 393 100.0 1e-109 MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKALFDQVLPAERYNNALA QSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSGAIQLLVGADFNGTVLGTR VTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAVKKDGGDFDQFTGATITPRAV VNAVKRAGLYAQTLPAQLSQLPACGE >gi|299856424|gb|ADWV01000027.1| GENE 8 5983 - 7041 806 352 aa, chain - ## HITS:1 COG:ECs2339 KEGG:ns NR:ns ## COG: ECs2339 COG4658 # Protein_GI_number: 15831593 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Escherichia coli O157:H7 # 1 352 1 352 352 630 99.0 1e-180 MVFRIASSPYIHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGLWLLWQKAI RWHIPLSFLVTLALCATLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHRKG >gi|299856424|gb|ADWV01000027.1| GENE 9 7042 - 9072 1708 676 aa, chain - ## HITS:1 COG:Z2636 KEGG:ns NR:ns ## COG: Z2636 COG4656 # Protein_GI_number: 15802043 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Escherichia coli O157:H7 EDL933 # 1 675 1 675 740 1099 97.0 0 MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFVIPLKQHIGAEGELCVS VGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSALAELSVIIDADGEDCWIP RDGWADYRTRSREELIERIHQFGVAGLGGAGFPTGVKLQGGGDKIETLIINAAECEPYIT ADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKPQAISMLRAVLADSNDISLRVIP TKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVIDGEPITERVVTLT GEAIARPGNVWARLGTPVRHLLNDAGFCPSADQMVIMGGPLMGFTLPWLDVPVVKITNCL LAPSANELGEPQEEQSCIRCSACADACPADLLPQQLYWFSKGQQHDKATTHNIADCIECG ACAWVCPSNIPLVQYFRQEKAEIAAIRQEEKRAAEAKARFEARQARLEREKAARLERHKS AAVQPAAKDKDAIAAALARVKEKQAQATQPIVIKAGERPDNSAIIAAREARKAQARAKQA ELQQTNDAATVADPRKTAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKA RKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQTNAEPEEQVDPRKAAVAAAIA RAQAKKAAQQKVVNED >gi|299856424|gb|ADWV01000027.1| GENE 10 9065 - 9643 457 192 aa, chain - ## HITS:1 COG:ydgM KEGG:ns NR:ns ## COG: ydgM COG2878 # Protein_GI_number: 16129586 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Escherichia coli K12 # 1 192 1 192 192 365 100.0 1e-101 MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPY AEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQEITPARMVAVIDENNCIGC TKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNT IPVRIIPVEHHA >gi|299856424|gb|ADWV01000027.1| GENE 11 9643 - 10224 630 193 aa, chain - ## HITS:1 COG:ECs2336 KEGG:ns NR:ns ## COG: ECs2336 COG4657 # Protein_GI_number: 15831590 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 285 99.0 4e-77 MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID TWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVA LLNINLGHNFLQSALYGFSAAIGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLM SLAFMGFSGLVKL >gi|299856424|gb|ADWV01000027.1| GENE 12 10301 - 10741 325 146 aa, chain - ## HITS:1 COG:no KEGG:SSON_1532 NR:ns ## KEGG: SSON_1532 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 146 9 154 154 204 100.0 1e-51 MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTFQTLGGQALTTQILWGV SFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAVKAFAFSPVEDGIAVRQLL FTLLATALIVPYFKRSSRVKATFVNP >gi|299856424|gb|ADWV01000027.1| GENE 13 10827 - 11042 264 71 aa, chain - ## HITS:1 COG:no KEGG:G2583_2020 NR:ns ## KEGG: G2583_2020 # Name: cnu # Def: OriC-binding nucleoid-associated protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 71 1 71 71 133 100.0 3e-30 MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAADHRRAELVSGGRLFDLG QVPKSVWHYVQ >gi|299856424|gb|ADWV01000027.1| GENE 14 11315 - 11470 86 51 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1792 NR:ns ## KEGG: EC55989_1792 # Name: blr # Def: beta-lactam resistance membrane protein # Organism: E.coli_55989 # Pathway: not_defined # 1 51 16 66 66 92 100.0 6e-18 MDQSREMWAVMNRLIELTGWIVLVVSVILLGVASHIDNYQPPEQSASVQHK >gi|299856424|gb|ADWV01000027.1| GENE 15 11683 - 12723 987 346 aa, chain + ## HITS:1 COG:ECs2332 KEGG:ns NR:ns ## COG: ECs2332 COG0673 # Protein_GI_number: 15831586 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Escherichia coli O157:H7 # 1 346 14 359 359 682 99.0 0 MSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVKADWPTVTVVSEPKHLF NDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALAKSLGRVLSV FHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVRDRWREQGGPGSGIWYDLAPH LLDQAITLFGLPVSMTVDLAQLRPGEQSTDYFHAILSYPQRRVILHGTMLAAAESARYIV HGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTRVEGEERVEETLLTVPGNYP AYYAAIRDALNGDGENPVPASQAIQVMELIELGIESAKHRATLCLA >gi|299856424|gb|ADWV01000027.1| GENE 16 12758 - 13759 1189 333 aa, chain - ## HITS:1 COG:add KEGG:ns NR:ns ## COG: add COG1816 # Protein_GI_number: 16129581 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Escherichia coli K12 # 1 333 1 333 333 655 100.0 0 MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLIPHVQVIANEPDLVSFL TKLDWGVKVLASLDACRRVAFENIEDAARHGLHYVELRFSPGYMAMAHQLPVAGVVEAVI DGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHRDQITALDLAGDELGFPGSLF LSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAIEDRALMDFLAEQQI GIESCLTSNIQTSTVAELAAHPLKTFLEHGIRASINTDDPGVQGVDIIHEYTVAAPAAGL SREQIRQAQINGLEMAFLSAEEKRALREKVAAK >gi|299856424|gb|ADWV01000027.1| GENE 17 13863 - 15035 945 390 aa, chain - ## HITS:1 COG:malY KEGG:ns NR:ns ## COG: malY COG1168 # Protein_GI_number: 16129580 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Escherichia coli K12 # 1 390 1 390 390 816 98.0 0 MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAPCIIEALNQRLMHGVFG YSRWKNDEFLAAIAHWFSTQHYTAIDTQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPA YDAFYKAIEGNQRTVMPVALEKQADDWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPAL TGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRVYLKDNLT YISDKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEG RGFVRLNAGCPRSKLEKGVAGLINAIRAVR >gi|299856424|gb|ADWV01000027.1| GENE 18 15045 - 16637 1520 530 aa, chain - ## HITS:1 COG:malX_1 KEGG:ns NR:ns ## COG: malX_1 COG1263 # Protein_GI_number: 16129579 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Escherichia coli K12 # 1 450 1 450 450 845 99.0 0 MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVITLIPVLGNPVLQ AIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGFVGYAVMNLAVNFWLTNKG ILPTTDAAVLKANNIQSILGIQSIDTGILGAVITGIIVWMLHERFHNIRLPDALAFFGGT RFVPIISSLVMGLIGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLH HILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSCPTTHGFSESATRFLSQGKMPAFLG GLPGAALAMYHCARPENRHKIKGLLISGLIACVVGGTTEPLEFLFLFVAPVLYVIHALLT GLGFTVMSVLGVTIGNTDGNIIDFVVFGILHGLSTKWYMVPVVAAIWFVVYYVIFRFAIT RFNLKTPGRDSEVASSIEKAVAGAPGKSGYNVPAILEALGGADNIVSLDNCITRLRLSVK DMSLVNVQALKDNRAIGVVQLNQHNLQVVIGPQVQSVKDEMAGLMHTVRA >gi|299856424|gb|ADWV01000027.1| GENE 19 16812 - 17840 836 342 aa, chain + ## HITS:1 COG:ECs2328 KEGG:ns NR:ns ## COG: ECs2328 COG1609 # Protein_GI_number: 15831582 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 644 100.0 0 MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAAIEELGFVRNRQASALR GGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHGGKDGEQLAQRFSLLLNQG VDGVVIAGAAGSSDDLRRMAEEKAIPVIFASRASYLDDVDTVRPDNMQAAQLLTEHLIRN GHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSDWVLECTSSQKQAAEAITALLRH NPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDRYFEQQVSLAAFTDATPTTLDDIPV TWASTPARELGTTLADRMMQKITHEETHSRNLIIPARLIAAK >gi|299856424|gb|ADWV01000027.1| GENE 20 17953 - 18720 245 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 12 248 4 238 242 99 29 5e-20 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG QAFACRCDITSEQELSALADFAVSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVF SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEK NIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVS GQILTVSGGGVQELN >gi|299856424|gb|ADWV01000027.1| GENE 21 18952 - 19539 560 195 aa, chain + ## HITS:1 COG:ECs2326 KEGG:ns NR:ns ## COG: ECs2326 COG1309 # Protein_GI_number: 15831580 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 195 2 196 196 359 99.0 2e-99 MDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQA IILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAM LKNKHMTITEFVAQRMRDAQQKGEISPDINTSMTSRLLLDLTYGVLADIEAEDLAREASF AQGLRAMIGGILTAS >gi|299856424|gb|ADWV01000027.1| GENE 22 19928 - 21739 1891 603 aa, chain + ## HITS:1 COG:uidA KEGG:ns NR:ns ## COG: uidA COG3250 # Protein_GI_number: 16129575 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Escherichia coli K12 # 1 603 1 603 603 1267 99.0 0 MLRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRAIAVPGSFNDQFADADI RNYVGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQEVMEHQGGYTPFEADVTP YVIAGKSVRITVCVNNELNWQTIPPGMVITDENGKKKQSYFHDFFNYAGIHRSVMVYTTP NTWVDDITVVTHVAQDCNHASVDWQVVANGDVSVELRDADQQVVATGQGTSGTLQVVNPH LWQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAVKGEQFLINHKPFYFTGFGRHEDAD LRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYAEEMLDWADEHGIVVIDETAAVGFNLS LGIGFEAGNKPKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTRPQG AREYFAPLAEATRKLDPTRPITCVNVMFCDAHTDTISDLFDVLCLNRYYGWYVQSGDLET AEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRV SAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQG GKQ >gi|299856424|gb|ADWV01000027.1| GENE 23 21736 - 23109 1454 457 aa, chain + ## HITS:1 COG:ECs2323 KEGG:ns NR:ns ## COG: ECs2323 COG2211 # Protein_GI_number: 15831577 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli O157:H7 # 1 457 1 457 457 828 99.0 0 MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFA DVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLG LCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVS VYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLKISLQTLKRNRPLFMLCIGALCV LISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIG ALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIE GLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLA FVIIWFYPLTDKKFKEIVVEIDNRKKVQQQLISDITN >gi|299856424|gb|ADWV01000027.1| GENE 24 23148 - 24413 1023 421 aa, chain + ## HITS:1 COG:no KEGG:ECSE_1736 NR:ns ## KEGG: ECSE_1736 # Name: not_defined # Def: putative outer membrane porin protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 421 1 421 421 822 99.0 0 MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQ GGLLDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENS LLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALGYWALTPNIDLWGMWRSRVFL WTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILE KSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQVTWNAPWGSVFGSGGYLRH AMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDV RIEGAGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSTLGDRLNYWDVKMSIQYDFML K >gi|299856424|gb|ADWV01000027.1| GENE 25 24458 - 25966 1746 502 aa, chain - ## HITS:1 COG:ECs2320 KEGG:ns NR:ns ## COG: ECs2320 COG5339 # Protein_GI_number: 15831574 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 502 1 502 502 920 99.0 0 MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNY HRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQT TLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLKPLNYEQKDEKVAFSGGEFQL NADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLASFGERVGNQKLSLE KMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVG QIDGEAWHQFSQQYNAQTQALLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAP LSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVKSLDAKLTIPVDMATEFMTQV AKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYTNGQITLNGQKMPLE DFVGMFAMPALNVPVVPAIPQQ >gi|299856424|gb|ADWV01000027.1| GENE 26 26067 - 27242 1319 391 aa, chain - ## HITS:1 COG:manA KEGG:ns NR:ns ## COG: manA COG1482 # Protein_GI_number: 16129571 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Escherichia coli K12 # 1 391 1 391 391 744 99.0 0 MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKSSSRVQNAAGDIVSLRD VIESNKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNKRNSEIGFAKENAAGIPMD AAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQPVAGAHPAIAHFLQQPNAERL SELFASLLNMQGEEKSRALAILKSALDSQQGEPWQTIRLISEFYPEDSGLFSPLLLNVVK LNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAGLTPKYIDIPELVANVKFEAKPANQ LLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETTISQQSAAILFCVEGDATLWKGSQQLQ LKPGESAFIAANESPVTVKGHGRLARVYNKL >gi|299856424|gb|ADWV01000027.1| GENE 27 27441 - 29087 489 548 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 76 531 38 482 508 192 33 2e-48 MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAPEALTLLARQAFHDASF MLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVLPTCQDTGTAIIVGKKGQR VWTGGCDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNTGTNLPAQIDLYAVDGDEYKF LCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRTLGTAACPPYHIAFVIGGTSAET NLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKELLIEAQNLGLGAQFGGKYFAHDIRV IRLPRHGASCPVGMGVSCSADRNIKAKINRQGIWIEKLEHNPGKYIPEELRKAGEGEAVR VDLNRPMKEILAQLSQYPVSTRLSLNGTIIVGRDIAHAKLKERMDNGEGLPQYIKDHPIY YAGPAKTPEGYASGSLGPTTAGRMDSYVDQLQAQGGSMIMLAKGNRSQQVTDACKKHGGF YLGSIGGPAAVLAQGSIKSLECVEYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIQL TQCTRCVK >gi|299856424|gb|ADWV01000027.1| GENE 28 29230 - 30633 1584 467 aa, chain + ## HITS:1 COG:ECs2317 KEGG:ns NR:ns ## COG: ECs2317 COG0114 # Protein_GI_number: 15831571 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Escherichia coli O157:H7 # 1 467 1 467 467 900 100.0 0 MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNE DLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGG VRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLSEKSRAFAD IVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHP EYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLAS GPRCGIGEISIPENEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNV FRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDK AAEIAKKAHKEGLTLKAAALALGYLSEAEFDSWVRPEQMVGSMKAGR >gi|299856424|gb|ADWV01000027.1| GENE 29 30630 - 31349 342 239 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_2321 NR:ns ## KEGG: ECH74115_2321 # Name: tus # Def: DNA replication terminus site-binding protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 239 75 313 313 460 99.0 1e-128 MRHFRHLFIQQQSENRSSKAAVRLPGVLCYQVDNLSQAALVSHIQHINKLKTTFEHIVTV ESELPTAARFEWVHRHLPGLITLNAYRTLTVLHDPATLRFGWANKHIIKNLHRDEVLAQL EKSLKSPRSVAPWTREEWQRKLEREYQDIAALPQNAKLKIKRPVKVQPIARVWYKGDQKQ VQHACPTPLIALINRDNGAGVPDVGELLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD >gi|299856424|gb|ADWV01000027.1| GENE 30 31332 - 31481 91 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAEMTQRQRLRVVAEMLFYLNTIKRIMLILFFTSGKENTRATNSLCCSR >gi|299856424|gb|ADWV01000027.1| GENE 31 31634 - 32935 1311 433 aa, chain - ## HITS:1 COG:rstB KEGG:ns NR:ns ## COG: rstB COG0642 # Protein_GI_number: 16129567 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 433 1 433 433 872 99.0 0 MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMNSSLYLMRSELREIPPH DWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEIVALDDQYTFLQRIPRSHYVL AVGPVPYLYYLHQMRLLDIALIAFIAISLAFPVFIWMRPHWQDMLKLEAAAQRFGDGHLN ERIHFDEGSSFERLGIAFNQMADNINALIASKKQLIDGIAHELRTPLVRLRYRLEMSDNL SAAESQALNRDISQLEALIEELLTYARLDRPQNELHLSEPDLPLWLSTHLADIQAVTPDK TVRIKTLAQGHYAALDMRLMERVLDNLLNNALRYCHSTVETSLLLSGNRATLIVEDDGPG IAPENREHIFEPFVRLDPSRDRSTGGCGLGLAIVHSIALAMGGTVNCDTSELGGARFSFS WPLWHNIPQFTSA >gi|299856424|gb|ADWV01000027.1| GENE 32 32939 - 33658 586 239 aa, chain - ## HITS:1 COG:rstA KEGG:ns NR:ns ## COG: rstA COG0745 # Protein_GI_number: 16129566 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli K12 # 1 239 4 242 242 445 99.0 1e-125 MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRESPDLVLLDIMLPGKDG MTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNE QATLTKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEISLSTADFELLWELATHAGQI MDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPHAWE >gi|299856424|gb|ADWV01000027.1| GENE 33 33787 - 34122 367 111 aa, chain + ## HITS:1 COG:ECs2313 KEGG:ns NR:ns ## COG: ECs2313 COG3136 # Protein_GI_number: 15831567 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein required for alginate biosynthesis # Organism: Escherichia coli O157:H7 # 1 111 1 111 111 165 100.0 2e-41 MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVASERGIEALRATII FSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWVLIICWIKLH >gi|299856424|gb|ADWV01000027.1| GENE 34 34119 - 34841 747 240 aa, chain - ## HITS:1 COG:ECs2312 KEGG:ns NR:ns ## COG: ECs2312 COG1028 # Protein_GI_number: 15831566 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 240 1 240 240 486 98.0 1e-137 MGKAQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLIKAGAQCIQADFS TNDGVMAFADEVLKSTHGLRAILHNASAWMAEKPGTPLADVLACMMQIHVNTPYLLNHAL ERLLRGHGHAASDIIHFTDYVVERGSDKHVAYAASKAALDNMTRSFARKLAPEVKVNSIA PSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSFPLDGGRHLR >gi|299856424|gb|ADWV01000027.1| GENE 35 34878 - 36260 1412 460 aa, chain - ## HITS:1 COG:ydgI KEGG:ns NR:ns ## COG: ydgI COG0531 # Protein_GI_number: 16129563 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 460 1 460 460 781 100.0 0 MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLIL TRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELR LFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVATLAKLLPLGLFVVLAMMMFKL DTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLLAVLS ALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSW TIMAAEVPFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLT IASEMILVPYFLVGAFLLKIATRPLHKAVGVGACIYGLWLLYASGPMHLLLSVVLYAPGL LVFLYARKTHTHDNVLNRQEMVLIGMLLIASVPATWMLVG >gi|299856424|gb|ADWV01000027.1| GENE 36 36446 - 37390 976 314 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1769 NR:ns ## KEGG: EC55989_1769 # Name: ydgH # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 314 1 314 314 520 100.0 1e-146 MKLKNTLLASALLSATAFSVNAATELTPEQAAAVKPFDRVVVTGRFNAIGEAVKAVSRRA DKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNRVINGVVELPKDQAVLIEP FDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDANQGGNQRITAFIYKKDAKKR IVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTASPSSEVGRFFETQSSKGGRYTV TLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTEVSYQVAKRAAKKGAKYYHITRQWQ ERGNNLTVSADLYK >gi|299856424|gb|ADWV01000027.1| GENE 37 37914 - 39446 1617 510 aa, chain + ## HITS:1 COG:ECs2309 KEGG:ns NR:ns ## COG: ECs2309 COG3288 # Protein_GI_number: 15831563 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Escherichia coli O157:H7 # 1 510 1 510 510 974 99.0 0 MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEG NSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMAMDSVPR ISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAA IGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME LFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEI FTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEKDGNITVDFDDVVIRGVTV IRAGEITWPAPPIQVSAQPQAAQKAAPEVKTEEKCACSPWRKYALMALAIILFGWLASVA PKEFLGHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGQGGWVSF LSFIAVLIASINIFGGFTVTQRMLKMFRKN >gi|299856424|gb|ADWV01000027.1| GENE 38 39457 - 40845 1480 462 aa, chain + ## HITS:1 COG:ECs2308 KEGG:ns NR:ns ## COG: ECs2308 COG1282 # Protein_GI_number: 15831562 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Escherichia coli O157:H7 # 1 462 1 462 462 850 100.0 0 MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATIFGPDTGNVGWI LLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVGFNSYLHHDAGMAPILVNI HLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNRHKMNLAALVVSFLLLIVFVR TDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDL LIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGDDQEVGEHREITAEETA ELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLA EAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAQDDPKSPIAGMPVLEVWKAQNV IVFKRSMNTGYAGVQNPLFFKENTHMLFGDAKASVDAILKAL >gi|299856424|gb|ADWV01000027.1| GENE 39 40870 - 41904 1043 344 aa, chain - ## HITS:1 COG:ydgG KEGG:ns NR:ns ## COG: ydgG COG0628 # Protein_GI_number: 16129559 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Escherichia coli K12 # 1 344 1 344 344 493 100.0 1e-139 MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVP RVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVS VDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMARPV EGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLAFALNYIPNIG SVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGLSTLVVFLSLI FWGWLLGPVGMLLSVPLTIIVKIALEQTAGGQSIAVLLSDLNKE >gi|299856424|gb|ADWV01000027.1| GENE 40 42316 - 42681 451 121 aa, chain + ## HITS:1 COG:ECs2306 KEGG:ns NR:ns ## COG: ECs2306 COG2076 # Protein_GI_number: 15831560 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 121 1 121 121 182 100.0 2e-46 MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLSYIFLSFAVKKIALGVA YALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKARKPELEVNHGA V >gi|299856424|gb|ADWV01000027.1| GENE 41 42668 - 42997 480 109 aa, chain + ## HITS:1 COG:ECs2305 KEGG:ns NR:ns ## COG: ECs2305 COG2076 # Protein_GI_number: 15831559 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 109 1 109 109 144 100.0 5e-35 MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAAVLAAFSALSQAVKGID LSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMIMVKLA >gi|299856424|gb|ADWV01000027.1| GENE 42 43036 - 43857 533 273 aa, chain - ## HITS:1 COG:ydgD KEGG:ns NR:ns ## COG: ydgD COG3591 # Protein_GI_number: 16129556 # Func_class: E Amino acid transport and metabolism # Function: V8-like Glu-specific endopeptidase # Organism: Escherichia coli K12 # 1 273 1 273 273 518 99.0 1e-147 MRTTIAVVLGAISLTSAFVFADKPDVAKSANDEVSTLFFGHDDRVPVNDTTQSPWDAVGQ LETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIEGRV DPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITPLPLFEGDKAALTAALKSAGR KVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGV QSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK >gi|299856424|gb|ADWV01000027.1| GENE 43 44133 - 44441 261 102 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKVLALVVAAAMGLSSAAFAAETATTPAPTATTTKAAPAKTTHHKKQHKAAPAQKAQAA KKHHKNTKAEQKAPEQKAQAAKKHAGKHSHQQPAKPAAQPAA >gi|299856424|gb|ADWV01000027.1| GENE 44 44865 - 46064 984 399 aa, chain - ## HITS:1 COG:ynfM KEGG:ns NR:ns ## COG: ynfM COG0477 # Protein_GI_number: 16129554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 399 19 417 417 691 99.0 0 SISQPNQFIKRGTPQFMRVTLALFSAGLATFALLYCVQPILPVLSQEFGLTPANSSISLS ISTAMLAIGLLFTGPLSDAIGRKPVMVTALLLASICTLLSTMMTSWHGILIMRALIGLSL SGVAAVGMTYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLISGVFTDFFNWRIALAAIGC FALASALMFWKILPESRHFRPTSLRPKTLFINFRLHWRDRGLPLLFAEGFLLMGSFVTLF NYIGYRLMLSPWHVSQAVVGLLSLAYLTGTWSSPKAGTMTTRYGRGPVMLFSTGVMLFGL LMTLFNSLWLIFAGMLLFSAGFFAAHSVASSWIGPRAKRAKGQASSLYLFSYYLGSSIAG TLGGVFWHNYGWNGVGAFIALMLVIALLVGTRLHRRLHA Prediction of potential genes in microbial genomes Time: Sun May 15 15:48:56 2011 Seq name: gi|299856423|gb|ADWV01000028.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont27.1, whole genome shotgun sequence Length of sequence - 44443 bp Number of predicted genes - 35, with homology - 35 Number of transcription units - 22, operones - 7 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 104 - 1021 453 ## COG3209 Rhs family protein + Term 1061 - 1095 5.3 - Term 1182 - 1245 2.1 2 2 Tu 1 7/0.111 - CDS 1315 - 1629 139 ## COG1662 Transposase and inactivated derivatives, IS1 family 3 3 Tu 1 . - CDS 1835 - 2107 78 ## COG3677 Transposase and inactivated derivatives 4 4 Tu 1 . - CDS 2252 - 2860 679 ## B21_03772 hypothetical protein - Prom 2938 - 2997 2.4 5 5 Tu 1 . - CDS 3044 - 3361 451 ## COG3060 Transcriptional regulator of met regulon - Prom 3496 - 3555 7.3 + Prom 3542 - 3601 4.0 6 6 Op 1 5/0.444 + CDS 3638 - 4798 1252 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 7 6 Op 2 4/0.444 + CDS 4801 - 7233 2809 ## COG0527 Aspartokinases + Term 7384 - 7418 2.2 + Prom 7372 - 7431 6.0 8 7 Tu 1 . + CDS 7582 - 8472 959 ## COG0685 5,10-methylenetetrahydrofolate reductase + Term 8484 - 8523 -0.3 + Prom 8547 - 8606 4.7 9 8 Tu 1 1/0.889 + CDS 8801 - 10981 2780 ## COG0376 Catalase (peroxidase I) + Term 10991 - 11035 15.5 10 9 Tu 1 . + CDS 11075 - 11980 883 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 11 10 Tu 1 . - CDS 12007 - 12624 559 ## COG3738 Uncharacterized protein conserved in bacteria - Prom 12799 - 12858 3.5 - Term 12681 - 12724 3.1 12 11 Op 1 3/0.556 - CDS 12899 - 14002 1385 ## COG0371 Glycerol dehydrogenase and related enzymes 13 11 Op 2 2/0.778 - CDS 14013 - 14675 877 ## COG0176 Transaldolase 14 11 Op 3 . - CDS 14687 - 17188 2529 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) - Prom 17373 - 17432 4.2 + Prom 17273 - 17332 3.3 15 12 Op 1 7/0.111 + CDS 17497 - 18576 1316 ## COG1299 Phosphotransferase system, fructose-specific IIC component 16 12 Op 2 4/0.444 + CDS 18591 - 18911 547 ## COG1445 Phosphotransferase system fructose-specific component IIB 17 12 Op 3 11/0.000 + CDS 18962 - 21259 2292 ## COG1882 Pyruvate-formate lyase 18 12 Op 4 2/0.778 + CDS 21225 - 22103 540 ## COG1180 Pyruvate-formate lyase-activating enzyme 19 12 Op 5 . + CDS 22105 - 22446 324 ## COG1445 Phosphotransferase system fructose-specific component IIB - Term 22320 - 22354 -1.0 20 13 Tu 1 . - CDS 22433 - 23284 810 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 23417 - 23476 4.7 - Term 23326 - 23358 1.3 21 14 Tu 1 . - CDS 23499 - 25232 1957 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 25258 - 25317 4.3 - Term 25364 - 25397 5.2 22 15 Tu 1 . - CDS 25415 - 28027 3204 ## COG2352 Phosphoenolpyruvate carboxylase - Prom 28274 - 28333 5.3 - Term 28368 - 28410 3.5 23 16 Tu 1 . - CDS 28418 - 29569 980 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Prom 29618 - 29677 3.3 + Prom 29552 - 29611 6.1 24 17 Op 1 8/0.000 + CDS 29723 - 30727 934 ## COG0002 Acetylglutamate semialdehyde dehydrogenase 25 17 Op 2 2/0.778 + CDS 30738 - 31511 1066 ## COG0548 Acetylglutamate kinase 26 17 Op 3 . + CDS 31572 - 32945 1856 ## COG0165 Argininosuccinate lyase + Prom 33136 - 33195 10.5 27 18 Op 1 7/0.111 + CDS 33443 - 34657 1155 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 28 18 Op 2 9/0.000 + CDS 34724 - 36007 1072 ## COG0477 Permeases of the major facilitator superfamily + Prom 36166 - 36225 5.1 29 18 Op 3 . + CDS 36259 - 37176 840 ## COG0583 Transcriptional regulator + Term 37424 - 37449 -0.8 30 19 Tu 1 . - CDS 37159 - 38559 431 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 38591 - 38650 4.2 + Prom 38555 - 38614 4.2 31 20 Op 1 . + CDS 38836 - 39540 659 ## COG1309 Transcriptional regulator 32 20 Op 2 . + CDS 39540 - 39899 390 ## LF82_3412 inner membrane protein YijD + Term 39907 - 39947 9.3 33 21 Tu 1 . - CDS 39939 - 41039 1215 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Prom 41064 - 41123 6.0 + Prom 41113 - 41172 3.3 34 22 Op 1 2/0.778 + CDS 41408 - 43252 1638 ## COG4206 Outer membrane cobalamin receptor protein 35 22 Op 2 . + CDS 43197 - 44054 638 ## COG0796 Glutamate racemase Predicted protein(s) >gi|299856423|gb|ADWV01000028.1| GENE 1 104 - 1021 453 305 aa, chain + ## HITS:1 COG:ECs4864 KEGG:ns NR:ns ## COG: ECs4864 COG3209 # Protein_GI_number: 15834118 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 # 1 305 1090 1394 1394 628 97.0 1e-180 MFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCD HRGLPLALISTEGATAWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRY YDPLQGRYITQDPIGLKGGWNLYTYPLSPVNSMDPLGLYEFKSKNIDDIGIFALAMCNGE SINENKEYGGLICKKQGEYFPMNPISSNDNDSVDLRNIKCPEGSERVGDYHTHGFYSDDK GNKVTKENDVYDSLNFSSKDLTNSYMNGMGKKEYSSYLGTPNNTYLKYNPKAKGNGVTII RQGSN >gi|299856423|gb|ADWV01000028.1| GENE 2 1315 - 1629 139 104 aa, chain - ## HITS:1 COG:ECs1301 KEGG:ns NR:ns ## COG: ECs1301 COG1662 # Protein_GI_number: 15830555 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli O157:H7 # 1 59 61 119 145 86 69.0 1e-17 MLTTDEWGSYARELPKEKHLTGKIFTQHIERNNLTLRTRIKRLARRTICFSRSVELHEKV IGAFIENICSTNWSHHPSDKLSLDDYQTEYTAKDFYLILLFFLK >gi|299856423|gb|ADWV01000028.1| GENE 3 1835 - 2107 78 90 aa, chain - ## HITS:1 COG:YPO0981 KEGG:ns NR:ns ## COG: YPO0981 COG3677 # Protein_GI_number: 16121285 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 86 1 86 87 120 68.0 8e-28 MVTVNLHCPRCQSVQVYRHGQNPKRHDRFRGRDCHRVFQLSYCYEPRKPGVKDQIAEMTF NGAGVRDTARTLKIGINTVIRTLKNSRHEE >gi|299856423|gb|ADWV01000028.1| GENE 4 2252 - 2860 679 202 aa, chain - ## HITS:1 COG:no KEGG:B21_03772 NR:ns ## KEGG: B21_03772 # Name: yiiX # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 202 1 202 202 369 100.0 1e-101 MKNRLLILSLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVIRNKKP YVFEAVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFS WSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERYGKNIPLEETVVS PQAVFDAPQLTTVAKEWPLFSW >gi|299856423|gb|ADWV01000028.1| GENE 5 3044 - 3361 451 105 aa, chain - ## HITS:1 COG:ECs4867 KEGG:ns NR:ns ## COG: ECs4867 COG3060 # Protein_GI_number: 15834121 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulator of met regulon # Organism: Escherichia coli O157:H7 # 1 105 1 105 105 198 100.0 2e-51 MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCE AFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY >gi|299856423|gb|ADWV01000028.1| GENE 6 3638 - 4798 1252 386 aa, chain + ## HITS:1 COG:metB KEGG:ns NR:ns ## COG: metB COG0626 # Protein_GI_number: 16131777 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Escherichia coli K12 # 1 386 1 386 386 771 99.0 0 MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRA LAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVL FVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPA LQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYL LLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAML SFELDGDEQTLRRFLSGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLL RISTGIEDGEDLIADLENGFRAANKG >gi|299856423|gb|ADWV01000028.1| GENE 7 4801 - 7233 2809 810 aa, chain + ## HITS:1 COG:metL_1 KEGG:ns NR:ns ## COG: metL_1 COG0527 # Protein_GI_number: 16131778 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Escherichia coli K12 # 1 448 1 448 448 881 100.0 0 MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDMMVVSAAGSTTNQLINW LKLSQTDRLSAHQVQQTLRRYQCDLISGLLPAEEADSLISAFVSDLERLAALLDSGINDA VYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAERAAQPQVDEGLSYPLLQQLL VQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIGALAGVSRVTIWSDVAGVYSADP RKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSGSEIDLQLRCSYTPDQGSTRIER VLASGTGARIVTSHDDVCLIEFQVPASQDFKLAHKEIDQILKRAQVRPLAVGVHNDRQLL QFCYTSEVADSALKILDEAGLPGELRLRQGLALVAMVGAGVTRNPLHCHRFWQQLKGQPV EFTWQSDDGISLVAVLRTGPTESLIQGLHQSVFRAEKRIGLVLFGKGNIGSRWLELFARE QSTLSARTGFEFVLAGVVDSRRSLLSYDGLDASRALAFFNDEAVEQDEESLFLWMRAHPY DDLVVLDVTASQQLADQYLDFASHGFHVISANKLAGASDSNKYRQIHDAFEKTGRHWLYN ATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLT EPDPRDDLSGKDVMRKLVILAREAGYNIEPDQVRVESLVPAHCEGGSIDHFFENGDELNE QMVQRLEAAREMGLVLRYVARFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRD NPLVIRGPGAGRDVTAGAIQSDINRLAQLL >gi|299856423|gb|ADWV01000028.1| GENE 8 7582 - 8472 959 296 aa, chain + ## HITS:1 COG:metF KEGG:ns NR:ns ## COG: metF COG0685 # Protein_GI_number: 16131779 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Escherichia coli K12 # 1 296 1 296 296 611 100.0 1e-175 MSFFHASQRDALNQSLAEVQGQINVSFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTY GANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGD LPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRA ITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFD GLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGVRPGL >gi|299856423|gb|ADWV01000028.1| GENE 9 8801 - 10981 2780 726 aa, chain + ## HITS:1 COG:ECs4871 KEGG:ns NR:ns ## COG: ECs4871 COG0376 # Protein_GI_number: 15834125 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase (peroxidase I) # Organism: Escherichia coli O157:H7 # 1 726 1 726 726 1426 99.0 0 MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVDLLNQHSNRSNPLGEDF DYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIRMAWHGAGTYRSIDGRGGA GRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFG FGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLS AAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAGPTSNVGPDPEAAPIEEQGLGWAST YGSGVGADAITSGLEVVWTQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIP DPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKS RYIGPEVPKEDLIWQDPLPQPIYNPAEQDIIDLKFAIADSGLSVSELVSVAWASASTFRG GDKRGGANGARLALMPQRDWDVNAAAVRALPVLEKIQKESGKASLADIIVLAGVVGVEKA ASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKAQ QLTLTAPEMTALVGGMRVLGANFDGSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESK ELFEGRDRETGEVKYTASRADLVFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNL DRFDLL >gi|299856423|gb|ADWV01000028.1| GENE 10 11075 - 11980 883 301 aa, chain + ## HITS:1 COG:yijE KEGG:ns NR:ns ## COG: yijE COG0697 # Protein_GI_number: 16131781 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 1 301 12 312 312 485 99.0 1e-137 MSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLR GRGMRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGE RLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYTRHPR VDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLK NLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVSRKKKEAVSVKS I >gi|299856423|gb|ADWV01000028.1| GENE 11 12007 - 12624 559 205 aa, chain - ## HITS:1 COG:ECs4873 KEGG:ns NR:ns ## COG: ECs4873 COG3738 # Protein_GI_number: 15834127 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 418 98.0 1e-117 MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYMQL TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWQLKRPDSNIDHR RVPNLETWFTRHDKTRPISKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN IGAGAQEEDVLFSWRMVGHYRYFVK >gi|299856423|gb|ADWV01000028.1| GENE 12 12899 - 14002 1385 367 aa, chain - ## HITS:1 COG:gldA KEGG:ns NR:ns ## COG: gldA COG0371 # Protein_GI_number: 16131783 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Escherichia coli K12 # 1 367 14 380 380 702 100.0 0 MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFAQSTVEKSFKDAGLVVE IAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKALAHFMGVPVAIAPTIAST DAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGAPARLLAAGIGDALATWFEAR ACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAMLAAEQHVVTPALERVIEANTYL SGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTLTQLVLENAPVEEIETVAALS HAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGETIHNMPGGATPDQVYAALLVADQYGQ RFLQEWE >gi|299856423|gb|ADWV01000028.1| GENE 13 14013 - 14675 877 220 aa, chain - ## HITS:1 COG:talC KEGG:ns NR:ns ## COG: talC COG0176 # Protein_GI_number: 16131784 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Escherichia coli K12 # 1 220 1 220 220 384 98.0 1e-107 MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLPRLQKAIGDEGILFAQT MSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKILKKEGITTLGTAVYSAAQGLLA ALAGAKYVAPYVNRVDAQGGDGIRTVHELQALLEMHAPESMVLAASFKTPRQALDCLLAG CESITLPLDVAQQMLNTPAVESAIEKFEYDWNAAFGTTHL >gi|299856423|gb|ADWV01000028.1| GENE 14 14687 - 17188 2529 833 aa, chain - ## HITS:1 COG:ECs4877_1 KEGG:ns NR:ns ## COG: ECs4877_1 COG1080 # Protein_GI_number: 15834130 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Escherichia coli O157:H7 # 123 688 1 566 566 1094 98.0 0 MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRKGNAKSALALIGTDTLA GDNCQLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDELEPLPVSLTNLNPQIIRA RTVCSGSAGGILTPISSLDLNALGNLPAAKGVDAEQSALENGLTLVLKNIEFRLLDSDGA TSAILEAHRSLAGDTSLREHLLAGVSAGLSCAEAIVTSANHFCEEFARSSSSYLQERALD VRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELTPSQFLELDKNHLKGLLLKSGGTTS HTVILARSFNIPTLVGVDIDALTPWQHQTIYIDGNAGAIVVEPGEAVARYYQQEARVQDA LREQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAP GESELYNIFCQALESANGRSIIVRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEEYAS LFTTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAKQQLRNEHIPFDEKIQLGI MLEVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYA VQAVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMAQLDSRECRKL LNQAMACRTSLEVEHLLAQFPMTQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGR CRYPRKLEADLWAREAVFSTGLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFI IMLTLNKHAAGDQHMRIFSRLARRIMHEEFRNALVNAASADAIASLLQHELEL >gi|299856423|gb|ADWV01000028.1| GENE 15 17497 - 18576 1316 359 aa, chain + ## HITS:1 COG:frwC KEGG:ns NR:ns ## COG: frwC COG1299 # Protein_GI_number: 16131787 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Escherichia coli K12 # 1 359 1 359 359 566 100.0 1e-161 MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGAVPDAVADPNLKKLFDI GVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVGNSFGAGFFGALIAGIIGGIVVHYL KKIPVHKVLRSVMPIFIIPIVGTLITAGIMMWGLGEPVGALTNSLTQWLQGMQQGSIVML AVIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTVVAIAAVGICIPPLGMGLATLIGRKN FSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVIPSIMVGSVCGAVTAALVGAQCYAG WGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVLKSLARKNGSSTDEKEDDLDLDFEIN >gi|299856423|gb|ADWV01000028.1| GENE 16 18591 - 18911 547 106 aa, chain + ## HITS:1 COG:STM4113 KEGG:ns NR:ns ## COG: STM4113 COG1445 # Protein_GI_number: 16767378 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 106 1 106 106 162 96.0 2e-40 MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMV ILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA >gi|299856423|gb|ADWV01000028.1| GENE 17 18962 - 21259 2292 765 aa, chain + ## HITS:1 COG:pflD KEGG:ns NR:ns ## COG: pflD COG1882 # Protein_GI_number: 16131789 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 1 765 1 765 765 1545 99.0 0 MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVILRRAKATAYILEHVEISIRD EELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFAISEEDKRIYREELFPYWE KRSMKDFINGQMTDEVKAATSTQIFSINQTDKGQGHIIIDYPRLLNHGLGELVAQMQQHC QQQPENHFYQAALLLLEASQKHILRYAELAETMAANCTDAQRREELLTIAEISRHNAQHK PQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYMLPFYQTSLTQGEDAAFLKELLESL WVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLTENGRSAVNVLSFLCLDAYQSVQLPQP NLGVRTNALIDTPFLMKTAETIRLGTGIPQIFNDDVVVPAFLNRGVSLEDARDYSVVGCV ELSIPGRTYGLHDIAMFNLLKVMEICLYENEGNAALTYEGLLEQIRAKISHYITLMVEGS NICDIGHRDWAPVPLLSSFISDCLEKGRDITDGGARYNFSGVQGIGIANLSDSLHALKGM VFEQQRLSFDELLSVLKANFATPEGEKVRARLINRFEKYGNDIDEVDNISAELLRHYCKE VEKYQNPRGGYFTPGSYTVSAHVPLGSVVGATPDGRFAGEQLADGGLSPMLGQDAQGPTA VLKSVSKLDNTLLSNGTLLNVKFTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNAD TLREAQQRPQDYAGLVVRVAGYSAFFVELSKEIQDDIIRRTAHQL >gi|299856423|gb|ADWV01000028.1| GENE 18 21225 - 22103 540 292 aa, chain + ## HITS:1 COG:ECs4881 KEGG:ns NR:ns ## COG: ECs4881 COG1180 # Protein_GI_number: 15834135 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Escherichia coli O157:H7 # 1 292 1 292 292 600 99.0 1e-172 MTSSAGQRISCNVVETRRDDVARIFNIQRYSLNDGEGIRTVVFFKGCPHLCPWCANPESI SGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDALEREVMKDDIFFRTSGGG VTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLCDEVLFDLKIMD ATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPGFTLSRENMQQALDVLIPLKIRQ IHLLPFHQYGEPKYRLLGKTWSMKEVPAPSSADVTTMREMAERAGFQVTVGG >gi|299856423|gb|ADWV01000028.1| GENE 19 22105 - 22446 324 113 aa, chain + ## HITS:1 COG:frwD KEGG:ns NR:ns ## COG: frwD COG1445 # Protein_GI_number: 16131791 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Escherichia coli K12 # 1 113 1 113 113 204 98.0 3e-53 MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALGTENRLADEDIRRANVA LLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVLSAPQQTHLILE >gi|299856423|gb|ADWV01000028.1| GENE 20 22433 - 23284 810 283 aa, chain - ## HITS:1 COG:yijO KEGG:ns NR:ns ## COG: yijO COG2207 # Protein_GI_number: 16131792 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 283 1 283 283 549 99.0 1e-156 MYHDVSYLLSRLINGPLSLRQIYFASSNGPAPDLAYQVDFPRLEIVLEGEFVDTGAGATL VPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPR IGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDE RYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEV AHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE >gi|299856423|gb|ADWV01000028.1| GENE 21 23499 - 25232 1957 577 aa, chain - ## HITS:1 COG:yijP KEGG:ns NR:ns ## COG: yijP COG2194 # Protein_GI_number: 16131793 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli K12 # 1 577 1 577 577 1145 99.0 0 MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTNGIRDSLLFSSLWLIPV FLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYF SLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIKNKPFE KTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNENNALPPLANFKDESGNEPRTLV LVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLTVFNNVVTSRPYTIEILQQALTFAN EKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMTARNTMLTVFSRQTDKQYYMNQQRTQS AREYDTNVLKPFQDVLNDPAPKKLIIVHLLGTHIKYKYRYPENQGKFDGNTDHVPPGLSA EELESYNDYDNANLYNDHVVASLIKDFKAADPNGFLVYFSDHGEEVYDTPPHKTQGRNED NPTRHMYTIPFLLWTSEKWQATHPRDFSQDVDRKYSLAELIHTWSDLAGLSYDGYDPTRS VVNPQFKETTRWIGNPYKKNALIDYDTLPYGDQVGNQ >gi|299856423|gb|ADWV01000028.1| GENE 22 25415 - 28027 3204 870 aa, chain - ## HITS:1 COG:ppc KEGG:ns NR:ns ## COG: ppc COG2352 # Protein_GI_number: 16131794 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Escherichia coli K12 # 1 870 14 883 883 1699 99.0 0 MLGKVLGETIKDALGEHILERVETIRKLSKSSRAGNDANRQELLTTLQNLSNDELLPVAR AFSQFLNLANTAEQYHSISPKGEAASNPEVIARTLRKLKNQPELSEDTIKKAVESLSLEL VLTAHPTEITRRTLIHKMVEVNACLKQLDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRK LRPSPVDEAKWGFAVVENSLWQGVPNYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDR DGNPNVTADITRHVLLLSRWKATDLFLKDIQVLVSELSMVEATPELLALVGEEGAAEPYR YLMKNLRSRLMATQAWLEARLKGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIAN GDLLDTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRE LNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEA GIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAA SWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQ GEMIRFKYGLPEITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDLYRGYVR ENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLG AGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWP LGKELRNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQA EKEGQEPDPRVEQALMVTIAGIAAGMRNTG >gi|299856423|gb|ADWV01000028.1| GENE 23 28418 - 29569 980 383 aa, chain - ## HITS:1 COG:argE KEGG:ns NR:ns ## COG: argE COG0624 # Protein_GI_number: 16131795 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli K12 # 1 383 1 383 383 798 99.0 0 MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEVQPVPGTRN KFNMLASCGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFI LDALRDVDVTKLKKPLYILATADEETSMAGARYFAETTALRPDCAIIGEPTSLQPVRAHK GHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQLRDNLKERYHYEAFTVPYPTLN LGHIHGGDASNRICACCELHMDIRPLPGMTLNELNGLLNDALAPVSERWPGRLTVDELHP PIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTEAPFIQTLCPTLVLGPGSINQAHQPDEY LETRFIKPTRELITQVIHHFCWH >gi|299856423|gb|ADWV01000028.1| GENE 24 29723 - 30727 934 334 aa, chain + ## HITS:1 COG:argC KEGG:ns NR:ns ## COG: argC COG0002 # Protein_GI_number: 16131796 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Escherichia coli K12 # 1 334 1 334 334 655 99.0 0 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDLPL QPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGF THQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQMALKPLIDADLLDLNQWPVI NATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEIATHLGADVIFTPHLGNFPRGIL ETITCRLKSGVTQAQVAQVLQQAYAHKPLVRLYDKGVPALKNVVGLPFCDIGFAVQGEHL IIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI >gi|299856423|gb|ADWV01000028.1| GENE 25 30738 - 31511 1066 257 aa, chain + ## HITS:1 COG:ECs4888 KEGG:ns NR:ns ## COG: ECs4888 COG0548 # Protein_GI_number: 15834142 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Escherichia coli O157:H7 # 1 257 2 258 258 453 100.0 1e-127 MNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKK KNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGH VGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSD VSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAE QLPALFNGMPMGTRILA >gi|299856423|gb|ADWV01000028.1| GENE 26 31572 - 32945 1856 457 aa, chain + ## HITS:1 COG:argH KEGG:ns NR:ns ## COG: argH COG0165 # Protein_GI_number: 16131798 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Escherichia coli K12 # 1 456 1 456 457 881 99.0 0 MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEE ALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLW CKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDE SRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLS AAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQ GALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAA QQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLDELQKFSPVIDED VYPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARLE >gi|299856423|gb|ADWV01000028.1| GENE 27 33443 - 34657 1155 404 aa, chain + ## HITS:1 COG:rspA KEGG:ns NR:ns ## COG: rspA COG4948 # Protein_GI_number: 16129539 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 404 1 404 404 813 91.0 0 MKIIAADVFVTCPGRNFVTLKITTESGLCGLGDATLNGRELSVASYLKDHLCPQLIGRDA SRIEDIWQFFYKGAYWRRGPVTMSAISAIDMALWDIKAKAANMPLYQLLGGASREGVMVY CHTTGRTIDEVLEDYAKHQQMGFKAIRVQCGVPGMQTTYGLAKGKGLAYEPATKGLWPEE QLWSSEKYLDFTPKLFEAVRNKFGFNEHLLHDMHHRLTPIEAARFGKSIEDYRLFWMEDP TPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRI ADFASLYQVRTGSHGPSDLSPVCHAAALHFDLWVPNFGVQEYMGYSEQMLEVFPHSWRFE EGYMHPGDEPGLGISFDEKLAAKYPYDPAYLPVARLEDGTLWNW >gi|299856423|gb|ADWV01000028.1| GENE 28 34724 - 36007 1072 427 aa, chain + ## HITS:1 COG:ECs5316 KEGG:ns NR:ns ## COG: ECs5316 COG0477 # Protein_GI_number: 15834570 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 2 426 21 447 453 458 56.0 1e-129 MDVDVSTSVAGNKPQRIRRIQTVTLVLLFMAGIVNFLDRSSLSVAGEAIRGELGLSATEF GVLLSAFSLSYGFSQLPSGILLDRFGPRIVLGAGLIFWSLMQALTGMVNSFSHFILMRIG LGIGEAPFMPAGVKSITDWYAQKERGTALGIFNSSTVIGQAIAPPALVLMQLAWGWRTMF VIIGVAGILVGICWYAWYRNRAQFVLTDEERTYLSAPVKPRPQLQFSEWLALFKHRTTWG MILGFSGVNYTGWLYIAWLPGYLQAEQGFSLAKTGWVAAIPFLAAAVGMWVNGIVVDRLA KKGYDLAKTRKTAIVCGLMMSALGTLLVVQSSSPAQAVAFISMALFCVHFAGTSAWGLVQ VMVSETKVASIAGIQNFGSFVFASFAPIVTGWVVDTTHSFNLALVIAACVTFTGALCYFF IVKDRIE >gi|299856423|gb|ADWV01000028.1| GENE 29 36259 - 37176 840 305 aa, chain + ## HITS:1 COG:ECs4890 KEGG:ns NR:ns ## COG: ECs4890 COG0583 # Protein_GI_number: 15834144 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 305 1 305 305 596 100.0 1e-170 MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREC VPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL PALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFDKV LKQAV >gi|299856423|gb|ADWV01000028.1| GENE 30 37159 - 38559 431 466 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 7 453 4 443 458 170 26 1e-41 MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGGCTHWGTIPSKALRHAV SRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQGFYERNHCEILQGNARFV DEHTLALDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTHPRIYDSDSILSMHHEPRHVL IYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEY EKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALQNIGLETDSRGQLKVNSMYQ TAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVG KTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEI IHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF >gi|299856423|gb|ADWV01000028.1| GENE 31 38836 - 39540 659 234 aa, chain + ## HITS:1 COG:ECs4894 KEGG:ns NR:ns ## COG: ECs4894 COG1309 # Protein_GI_number: 15834148 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 234 1 234 234 409 100.0 1e-114 MFILWYSASSTFGKDSDIVMGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREA GIAPTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGN NPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTIV FSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE >gi|299856423|gb|ADWV01000028.1| GENE 32 39540 - 39899 390 119 aa, chain + ## HITS:1 COG:no KEGG:LF82_3412 NR:ns ## KEGG: LF82_3412 # Name: yijD # Def: inner membrane protein YijD # Organism: E.coli_LF82 # Pathway: not_defined # 1 119 1 119 119 222 100.0 4e-57 MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMP VGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE >gi|299856423|gb|ADWV01000028.1| GENE 33 39939 - 41039 1215 366 aa, chain - ## HITS:1 COG:trmA KEGG:ns NR:ns ## COG: trmA COG2265 # Protein_GI_number: 16131803 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Escherichia coli K12 # 1 366 1 366 366 738 100.0 0 MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHDGDDLY HIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLRHKLFQIDYLTTLSNQAVV SLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTKIELDQDYIDERLPVAGKEMI YRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEI AKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDP PRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMECG VLLTAK >gi|299856423|gb|ADWV01000028.1| GENE 34 41408 - 43252 1638 614 aa, chain + ## HITS:1 COG:btuB KEGG:ns NR:ns ## COG: btuB COG4206 # Protein_GI_number: 16131804 # Func_class: H Coenzyme transport and metabolism # Function: Outer membrane cobalamin receptor protein # Organism: Escherichia coli K12 # 1 614 1 614 614 1158 99.0 0 MIKKASLLTACSVTAFSAWAQDTSPDTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQST SVNDVLRRLPGVDITQNGGSGQLSSIFIRGTNASHVLVLIDGVRLNLAGVSGSADLSQFP IALVQRVEYIRGPRSAVYGSDAIGGVVNIITTRDEPGTEISAGWGSNSYQNYDVSTQQQL GDKTRVTLLGDYAHTHGYDVVAYGNTGTQAQTDNDGFLSKTLYGALEHNFTDAWSGFVRG YGYDNRTNYDAYYSPGSPLLDTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYNYDPH FGRYDSSATLDEMKQYTVQWANNVIVGHGSIGAGVDWQKQTTTPGTGYVENGYDQRNTGI YLTGLQQVGDFTFEGAARSDDNSQFGRHGTWQTSAGWEFIEGYRFIASYGTSYKAPNLGQ LYGFYGNPNLDPEKSKQWEGAFEGLTAGVNWRISGYRNDVSDLIDYDDHTLKYYNEGKAR IKGVEATANFDTGPLTHTVSYDYVDARNAITDTPLLRRAKQQVKYQLDWQLYDFDWGITY QYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYPVTSHLTVRGKIANLFDKDYETVYGYQ TAGREYTLSGSYTF >gi|299856423|gb|ADWV01000028.1| GENE 35 43197 - 44054 638 285 aa, chain + ## HITS:1 COG:ECs4898 KEGG:ns NR:ns ## COG: ECs4898 COG0796 # Protein_GI_number: 15834152 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Escherichia coli O157:H7 # 1 285 5 289 289 525 99.0 1e-149 MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPYLHYIYAFDNVAFPY GEKSEEFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKFDFPVVGVVPAIKP AARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSL DALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLE HEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFETLEKLAVLG Prediction of potential genes in microbial genomes Time: Sun May 15 15:49:16 2011 Seq name: gi|299856422|gb|ADWV01000029.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont28.1, whole genome shotgun sequence Length of sequence - 44522 bp Number of predicted genes - 41, with homology - 40 Number of transcription units - 25, operones - 8 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 190 57 ## COG2801 Transposase and inactivated derivatives 2 2 Tu 1 . - CDS 231 - 1589 344 ## COG2199 FOG: GGDEF domain + Prom 2080 - 2139 2.9 3 3 Op 1 . + CDS 2176 - 4599 1621 ## B21_01033 hypothetical protein 4 3 Op 2 6/0.000 + CDS 4608 - 6626 1033 ## COG0726 Predicted xylanase/chitin deacetylase + Term 6660 - 6697 3.2 + Prom 6638 - 6697 3.3 5 3 Op 3 . + CDS 6739 - 7944 815 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis + Term 7977 - 8009 -1.0 + Prom 7978 - 8037 3.6 6 4 Tu 1 . + CDS 8057 - 8359 155 ## ECB_01023 predicted inner membrane protein + Term 8424 - 8471 1.5 - Term 8358 - 8394 6.3 7 5 Tu 1 . - CDS 8409 - 9197 667 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase - Term 9745 - 9777 -1.0 8 6 Op 1 9/0.000 - CDS 9816 - 11087 1189 ## COG2837 Predicted iron-dependent peroxidase 9 6 Op 2 7/0.000 - CDS 11093 - 12220 1528 ## COG2822 Predicted periplasmic lipoprotein involved in iron transport 10 6 Op 3 1/1.000 - CDS 12278 - 13108 910 ## COG0672 High-affinity Fe2+/Pb2+ permease - Prom 13261 - 13320 4.5 11 7 Tu 1 . - CDS 13650 - 15158 1759 ## COG0591 Na+/proline symporter - Prom 15252 - 15311 2.9 12 8 Tu 1 . - CDS 15317 - 15526 93 ## EcSMS35_2110 hypothetical protein - Prom 15682 - 15741 2.3 + Prom 15408 - 15467 7.9 13 9 Tu 1 . + CDS 15581 - 19543 4670 ## COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase + Term 19551 - 19591 6.2 - Term 19536 - 19579 2.0 14 10 Tu 1 . - CDS 19583 - 20221 711 ## COG1309 Transcriptional regulator - Prom 20350 - 20409 3.7 + Prom 20340 - 20399 4.3 15 11 Op 1 4/0.250 + CDS 20509 - 21600 1006 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 16 11 Op 2 2/0.750 + CDS 21600 - 22292 719 ## COG1335 Amidases related to nicotinamidase 17 11 Op 3 5/0.125 + CDS 22304 - 22690 419 ## COG0251 Putative translation initiation inhibitor, yjgF family 18 11 Op 4 4/0.250 + CDS 22698 - 23498 672 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 19 11 Op 5 5/0.125 + CDS 23508 - 24098 500 ## COG0778 Nitroreductase 20 11 Op 6 1/1.000 + CDS 24109 - 24603 242 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 21 11 Op 7 . + CDS 24624 - 25952 732 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 22 12 Op 1 . - CDS 25885 - 26022 69 ## c1142 hypothetical protein 23 12 Op 2 . - CDS 26035 - 26208 105 ## COG3729 General stress protein - Prom 26373 - 26432 4.7 + Prom 26352 - 26411 3.7 24 13 Op 1 . + CDS 26581 - 27177 666 ## COG0655 Multimeric flavodoxin WrbA 25 13 Op 2 . + CDS 27198 - 27425 381 ## LF82_2690 uncharacterized protein YccJ + Term 27431 - 27469 3.5 26 14 Tu 1 . - CDS 27463 - 28704 1513 ## EC55989_1112 glucose-1-phosphatase/inositol phosphatase (EC:3.1.3.10) - Prom 28750 - 28809 3.9 27 15 Tu 1 . - CDS 28993 - 29181 169 ## ECSE_1063 hypothetical protein - Prom 29296 - 29355 4.3 28 16 Op 1 . + CDS 30512 - 31432 1033 ## COG2214 DnaJ-class molecular chaperone 29 16 Op 2 . + CDS 31432 - 31737 338 ## ECO111_1110 chaperone-modulator protein CbpM 30 17 Op 1 5/0.125 - CDS 31830 - 32429 583 ## COG3381 Uncharacterized component of anaerobic dehydrogenases 31 17 Op 2 7/0.000 - CDS 32426 - 34972 2692 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 32 17 Op 3 . - CDS 34972 - 36144 1028 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit - Prom 36172 - 36231 4.8 + Prom 36109 - 36168 4.9 33 18 Tu 1 . + CDS 36274 - 36966 783 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 34 19 Tu 1 . - CDS 36939 - 37931 729 ## COG1879 ABC-type sugar transport system, periplasmic component - Prom 37959 - 38018 2.9 + Prom 37946 - 38005 3.3 35 20 Op 1 1/1.000 + CDS 38080 - 40794 2524 ## COG0642 Signal transduction histidine kinase 36 20 Op 2 . + CDS 40866 - 41939 598 ## COG0348 Polyferredoxin + Term 42094 - 42130 2.6 - Term 41940 - 41980 8.2 37 21 Tu 1 . - CDS 41987 - 42160 261 ## ECB_00994 predicted regulator of phosphatidylethanolamine synthesis - Prom 42282 - 42341 4.2 - Term 42319 - 42349 1.0 38 22 Tu 1 . - CDS 42554 - 42766 307 ## COG1278 Cold shock proteins - Prom 42955 - 43014 6.0 + Prom 42936 - 42995 6.8 39 23 Tu 1 . + CDS 43052 - 43264 198 ## COG1278 Cold shock proteins + Prom 43452 - 43511 5.6 40 24 Tu 1 . + CDS 43706 - 44011 157 ## + Term 44049 - 44085 4.1 + Prom 44039 - 44098 5.5 41 25 Tu 1 . + CDS 44118 - 44520 231 ## ECIAI1_1027 putative outer membrane lipoprotein Predicted protein(s) >gi|299856422|gb|ADWV01000029.1| GENE 1 2 - 190 57 62 aa, chain + ## HITS:1 COG:tra5_g1 KEGG:ns NR:ns ## COG: tra5_g1 COG2801 # Protein_GI_number: 16128357 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 62 227 288 288 136 100.0 1e-32 NACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKN LA >gi|299856422|gb|ADWV01000029.1| GENE 2 231 - 1589 344 452 aa, chain - ## HITS:1 COG:ycdT_2 KEGG:ns NR:ns ## COG: ycdT_2 COG2199 # Protein_GI_number: 16128989 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 251 452 1 202 202 411 99.0 1e-114 MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIF MQLYFIYDRRQFSNCILSLAFLSCLIYFVKTVIIIQQIIEGRLTSSVVQNDIAIYYLFRQ MSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIA ELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLF MSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNEL TVQSASAKKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGG EEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNE IYRLADNALYEAKETGRNKVVVRDVVNFCESP >gi|299856422|gb|ADWV01000029.1| GENE 3 2176 - 4599 1621 807 aa, chain + ## HITS:1 COG:no KEGG:B21_01033 NR:ns ## KEGG: B21_01033 # Name: ycdS # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 807 1 807 807 1563 100.0 0 MYSSSRKRCPKTKWALKLLTAAFLAASPAAKSAVNNAYDALIIEARKGNTQPALSWFALK SALSNNQIADWLQIALWAGQDKQVITVYNRYRHQQLPARGYAAVAVAYRNLQQWQNSLTL WQKALSLEPQNKDYQRGQILTLADAGHYDTALVKLKQLNSGAPDKANLLAEAYIYKLAGR HQDELRAMTESLPENASTQQYPTEYVQALRNNQLAAAIDDANLTPDIRADIHAELVRLSF MPTRSESERYAIADRALAQYAALEILWHDNPDRTAQYQRIQVDHLGALLTRDRYKDVISH YQRLKKTGQIIPPWGQYWVASAYLKDHQPKKAQSIMTELFYHKETIAPDLSDEELADLFY SHLESENYPGALTVTQHTINTSPPFLRLMGTPTSIPNDTWLQGHSFLSTVAKYSNDLPQA EMTARELAYNAPGNQGLRIDYASVLQARGWPRAAENELKKAEVIEPRNINLEVEQAWTAL TLQEWQQAAVLTHDVVEREPQDPGVVRLKRAVDVHNLAELRIAGSTGIDAEGPDSGKHDV DLTTIVYSPPLKDNWRGFAGFGYADGQFSEGKGIVRDWLAGVEWRSRNIWLEAEYAERVF NHEHKPGARLSGWYDFNDNWRIGSQLERLSHRVPLRAMKNGVTGNSAQAYVRWYQNERRK YGVSWAFTDFSDSNQRHEVSLEGQERIWSSPYLIVDFLPSLYYEQNTEHDTPYYNPIKTF DIVPAFEASHLLWRSYENSWEQIFSAGVGASWQKHYGTDVVTQLGYGQRISWNDVIDAGA TLRWEKRPYDGDREHNLYVEFDMTFRF >gi|299856422|gb|ADWV01000029.1| GENE 4 4608 - 6626 1033 672 aa, chain + ## HITS:1 COG:ycdR KEGG:ns NR:ns ## COG: ycdR COG0726 # Protein_GI_number: 16128987 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Escherichia coli K12 # 1 672 1 672 672 1344 100.0 0 MLRNGNKYLLMLVSIIMLTACISQSRTSFIPPQDRESLLAEQPWPHNGFVAISWHNVEDE AADQRFMSVRTSALREQFAWLRENGYQPVSIAQIREAHRGGKPLPEKAVVLTFDDGYQSF YTRVFPILQAFQWPAVWAPVGSWVDTPADKQVKFGDELVDREYFATWQQVREVARSRLVE LASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTK VEVNPHVFVWPYGEANGIAIEELKKLGYDMFFTLESGLANASQLDSIPRVLIANNPSLKE FAQQIITVQEKSPQRIMHIDLDYVYDENLQQMDRNIDVLIQRVKDMQISTVYLQAFADPD GDGLVKEVWFPNRLLPMKADIFSRVAWQLRTRSGVNIYAWMPVLSWDLDPTLTRVKYLPT GEKKAQIHPEQYHRLSPFDDRVRAQVGMLYEDLAGHAAFDGILFHDDALLSDYEDASAPA ITAYQQAGFSGSLSEIRQNPEQFKQWARFKSRALTDFTLELSARVKAIRGPHIKTARNIF ALPVIQPESEAWFAQNYADFLKSYDWTAIMAMPYLEGVAEKSADQWLIQLTNQIKNIPQA KDKSILELQAQNWQKNGQHQAISSQQLAHWMSLLQLNGVKNYGYYPDNFLHNQPEIDLIR PEFSTAWYPKND >gi|299856422|gb|ADWV01000029.1| GENE 5 6739 - 7944 815 401 aa, chain + ## HITS:1 COG:ycdQ KEGG:ns NR:ns ## COG: ycdQ COG1215 # Protein_GI_number: 16128986 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 1 401 41 441 441 806 100.0 0 MSIMWIVGGVYFWVYRERHWPWGENAPAPQLKDNPSISIIIPCFNEEKNVEETIHAALAQ RYENIEVIAVNDGSTDKTRAILDRMAAQIPHLRVIHLAQNQGKAIALKTGAAAAKSEYLV CIDGDALLDRDAAAYIVEPMLYNPRVGAVTGNPRIRTRSTLVGKIQVGEYSSIIGLIKRT QRIYGNVFTVSGVIAAFRRSALAEVGYWSDDMITEDIDISWKLQLNQWTIFYEPRALCWI LMPETLKGLWKQRLRWAQGGAEVFLKNMTRLWRKENFRMWPLFFEYCLTTIWAFTCLVGF IIYAVQLAGVPLNIELTHIAATHTAGILLCTLCLLQFIVSLMIENRYEHNLTSSLFWIIW FPVIFWMLSLATTLVSFTRVMLMPKKQRARWVSPDRGILRG >gi|299856422|gb|ADWV01000029.1| GENE 6 8057 - 8359 155 100 aa, chain + ## HITS:1 COG:no KEGG:ECB_01023 NR:ns ## KEGG: ECB_01023 # Name: pgaD # Def: predicted inner membrane protein # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 100 38 137 137 171 100.0 7e-42 MDLLTGYYWQSEARSRLQFYFLLAVANAVVLIVWALYNKLRFQKQQHHAAYQYTPQEYAE SLAIPDELYQQLQKSHRMSVHFTSQGQIKMVVSEKALVRA >gi|299856422|gb|ADWV01000029.1| GENE 7 8409 - 9197 667 262 aa, chain - ## HITS:1 COG:ECs1266 KEGG:ns NR:ns ## COG: ECs1266 COG1702 # Protein_GI_number: 15830520 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Escherichia coli O157:H7 # 1 262 93 354 354 523 100.0 1e-148 MGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMGGVEAIGMARDSRDTSPILAR NEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDL GFLPGDIAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVV ILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVCSGLSDALERFEEDEMVGI VRFGKEDCVRSALCQRTLHAYS >gi|299856422|gb|ADWV01000029.1| GENE 8 9816 - 11087 1189 423 aa, chain - ## HITS:1 COG:ECs1265 KEGG:ns NR:ns ## COG: ECs1265 COG2837 # Protein_GI_number: 15830519 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Escherichia coli O157:H7 # 1 423 1 423 423 860 99.0 0 MQYEDKNGVNEPSRRRLLKGIGALALAGSCPVAHAQKTQSAPGTLSPVARNEKQPFYGKH QAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDS GILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQ ICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP DSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQT GAPLGMQHEHDVPDYASDPEGKVIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSG QLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFALPGVKDANDYLGSAL LRV >gi|299856422|gb|ADWV01000029.1| GENE 9 11093 - 12220 1528 375 aa, chain - ## HITS:1 COG:ECs1264 KEGG:ns NR:ns ## COG: ECs1264 COG2822 # Protein_GI_number: 15830518 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted periplasmic lipoprotein involved in iron transport # Organism: Escherichia coli O157:H7 # 1 375 1 375 375 702 99.0 0 MTINFRRNALQLSVAALFSSAFMANAADVTQVKVTVTDKQCEPMTITVNAGKTQFIIQNH SQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMTCGLLTNPKGKLIVKGEAT ADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDAIKAGDIEKAKALYAPTRQHY ERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHRLEKALFGDNTTKGMDQYADQLY TDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKISGEEDRYSHTDLWDFQANVEGSQK IVDLLRPQLQKANPELLAKVDANFKKVDTILAKYRTKDGFETYDKLTDADRNALKGPITA LAEDLAQLRGVLGLD >gi|299856422|gb|ADWV01000029.1| GENE 10 12278 - 13108 910 276 aa, chain - ## HITS:1 COG:ECs1263 KEGG:ns NR:ns ## COG: ECs1263 COG0672 # Protein_GI_number: 15830517 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Escherichia coli O157:H7 # 1 276 1 276 276 452 99.0 1e-127 MFVPFLIMLREGLEAALIVSLIASYLKRTQRGRWIGVMWIGVLLAAALCLGLGIFINETT GEFPQKEQELFEGIVAVIAVVILTWMVFWMRKVSRNVKVQLEQAVDSALQRGNHHGWALV MMVFFAVAREGLESVFFLLAAFQQDVGIWPPLGAMLGLATAVVLGFLLYWGGIRLNLGAF FKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQEIAFDMSAVLSTHSLFGTLMEGFFGYQ EAPSVSEVAVWFIYLIPALVAFALPPRAGATASRSA >gi|299856422|gb|ADWV01000029.1| GENE 11 13650 - 15158 1759 502 aa, chain - ## HITS:1 COG:putP KEGG:ns NR:ns ## COG: putP COG0591 # Protein_GI_number: 16128981 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Escherichia coli K12 # 1 502 1 502 502 880 99.0 0 MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGPFVTALSAGASDMSGWL LMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTEYNNNALTLPDYFTGRFED KSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATILYTFIGGF LAVSWTDTVQASLMIFALILTPVIVIISVGGFGVSLEVIKQKSIENVDMLKGLNFVAIIS LMGWGLGYFGQPHILARFMAADSHHSIVHARSISMTWMILCLAGAVAVGFFGIAYFNEHP AVAGAVNQNAERVFIELAQILFNPWIAGILLSAILAAVMSTLSCQLLVCSSAITEDLYKA FLRKHASQKELVWVGRVMVLVVALVAIALAANPENRVLGLVSYAWAGFGAAFGPVVLFSV MWSRMTRNGALAGMIIGALTVIVWKQFGWLGLYEIIPGFIFGSIGIVVFSLLGKAPSAAM QKRFAEADAHYHSAPPSRLQES >gi|299856422|gb|ADWV01000029.1| GENE 12 15317 - 15526 93 69 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_2110 NR:ns ## KEGG: EcSMS35_2110 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 69 1 69 69 101 100.0 1e-20 MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECN LMKNSVAEH >gi|299856422|gb|ADWV01000029.1| GENE 13 15581 - 19543 4670 1320 aa, chain + ## HITS:1 COG:ZputA_2 KEGG:ns NR:ns ## COG: ZputA_2 COG4230 # Protein_GI_number: 15801003 # Func_class: C Energy production and conversion # Function: Delta 1-pyrroline-5-carboxylate dehydrogenase # Organism: Escherichia coli O157:H7 EDL933 # 526 1320 1 795 795 1534 99.0 0 MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGA ANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPV AEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKAT RDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSG EPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAY MVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLA RQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDL ATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLI YPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIY APVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGL PHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEM SPVINPAEPKDIVGFVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQ MQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNF PLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGA QLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQ VVIDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVI DSEAKANIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVF GPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVG AVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALT QPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDE QDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHG DSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG >gi|299856422|gb|ADWV01000029.1| GENE 14 19583 - 20221 711 212 aa, chain - ## HITS:1 COG:ycdC KEGG:ns NR:ns ## COG: ycdC COG1309 # Protein_GI_number: 16128979 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 212 1 212 212 412 99.0 1e-115 MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV EAVTGATLRDEIFFNQTVENVQRIIIEGIRPR >gi|299856422|gb|ADWV01000029.1| GENE 15 20509 - 21600 1006 363 aa, chain + ## HITS:1 COG:ECs1258 KEGG:ns NR:ns ## COG: ECs1258 COG2141 # Protein_GI_number: 15830512 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Escherichia coli O157:H7 # 1 363 20 382 382 744 99.0 0 MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEF WDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGW QKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSV PMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVL FMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNIN MGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQ EVA >gi|299856422|gb|ADWV01000029.1| GENE 16 21600 - 22292 719 230 aa, chain + ## HITS:1 COG:ycdL KEGG:ns NR:ns ## COG: ycdL COG1335 # Protein_GI_number: 16128977 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli K12 # 1 230 15 244 244 465 99.0 1e-131 MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAA RAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVD ELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYF GVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSPTSFARIA >gi|299856422|gb|ADWV01000029.1| GENE 17 22304 - 22690 419 128 aa, chain + ## HITS:1 COG:ycdK KEGG:ns NR:ns ## COG: ycdK COG0251 # Protein_GI_number: 16128976 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 1 128 1 128 128 250 100.0 4e-67 MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIR KVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEI ATIAHIAK >gi|299856422|gb|ADWV01000029.1| GENE 18 22698 - 23498 672 266 aa, chain + ## HITS:1 COG:ycdJ KEGG:ns NR:ns ## COG: ycdJ COG0596 # Protein_GI_number: 16128975 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 266 1 266 266 497 98.0 1e-141 MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAED YSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAH TRRCFQVRERLLYSGGAQAWVEAQPLFLYPANWMAARAPRLEAEDALALAHFQGKNNLLR RLNALKRADFSHHADRIRCPVQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACN VTDPETFNALLLNGLASLLHHREAAL >gi|299856422|gb|ADWV01000029.1| GENE 19 23508 - 24098 500 196 aa, chain + ## HITS:1 COG:ECs1254 KEGG:ns NR:ns ## COG: ECs1254 COG0778 # Protein_GI_number: 15830508 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Escherichia coli O157:H7 # 1 196 1 196 196 381 97.0 1e-106 MNEAVSPGALSTLFTDARTHNGWRETPVSDETLRELYALMKWGPTSANCSPARIVFIRTV EGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFPHGDARSWFTSSPQLAEET AFRNSSMQAAYLIVACRALGLDTGPMSGFDRQYVDDAFFAGSTLKSNLLINIGYGDSSKL YARLPRLSFEEACGLL >gi|299856422|gb|ADWV01000029.1| GENE 20 24109 - 24603 242 164 aa, chain + ## HITS:1 COG:ECs1253 KEGG:ns NR:ns ## COG: ECs1253 COG1853 # Protein_GI_number: 15830507 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli O157:H7 # 13 164 1 152 152 308 99.0 3e-84 MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVW PVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCR ISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC >gi|299856422|gb|ADWV01000029.1| GENE 21 24624 - 25952 732 442 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 25 427 9 420 447 286 38 1e-76 MAMFGFPHWQLKSTSTESGVVAPYERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNL SILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQRINPNISIALGGIIACG LVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTV LCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFS TPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVG GSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAPVIGGASIVV FGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAIL LNALLSKRLVDVPPPEVVHQEP >gi|299856422|gb|ADWV01000029.1| GENE 22 25885 - 26022 69 45 aa, chain - ## HITS:1 COG:no KEGG:c1142 NR:ns ## KEGG: c1142 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_CFT073 # Pathway: not_defined # 1 45 1 45 45 79 91.0 4e-14 MTNAFLSEARQKVITAGYPGGFLFMAPDEQLLAVERQPTFCLTTH >gi|299856422|gb|ADWV01000029.1| GENE 23 26035 - 26208 105 57 aa, chain - ## HITS:1 COG:STM1121 KEGG:ns NR:ns ## COG: STM1121 COG3729 # Protein_GI_number: 16764478 # Func_class: R General function prediction only # Function: General stress protein # Organism: Salmonella typhimurium LT2 # 1 55 1 55 55 59 92.0 1e-09 MANHRGGSGNFAEDRERASEAGKKGGQHSGGNFKNDPQRASEAGKKGGKSSHGKSDN >gi|299856422|gb|ADWV01000029.1| GENE 24 26581 - 27177 666 198 aa, chain + ## HITS:1 COG:wrbA KEGG:ns NR:ns ## COG: wrbA COG0655 # Protein_GI_number: 16128970 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Escherichia coli K12 # 1 198 1 198 198 349 100.0 2e-96 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPV ATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQ EQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELS IARYQGEYVAGLAVKLNG >gi|299856422|gb|ADWV01000029.1| GENE 25 27198 - 27425 381 75 aa, chain + ## HITS:1 COG:no KEGG:LF82_2690 NR:ns ## KEGG: LF82_2690 # Name: yccJ # Def: uncharacterized protein YccJ # Organism: E.coli_LF82 # Pathway: not_defined # 1 75 1 75 75 125 100.0 6e-28 MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDK DSLFWGEQTIERKNV >gi|299856422|gb|ADWV01000029.1| GENE 26 27463 - 28704 1513 413 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1112 NR:ns ## KEGG: EC55989_1112 # Name: agp # Def: glucose-1-phosphatase/inositol phosphatase (EC:3.1.3.10) # Organism: E.coli_55989 # Pathway: Glycolysis / Gluconeogenesis [PATH:eck00010] # 1 413 1 413 413 832 99.0 0 MNKTLIAAAVAGIVLIASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNK WPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPDTVYAYANSLQRTVAT AQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDS YQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYY EGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRT SAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIE YVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDSVLNEAVK >gi|299856422|gb|ADWV01000029.1| GENE 27 28993 - 29181 169 62 aa, chain - ## HITS:1 COG:no KEGG:ECSE_1063 NR:ns ## KEGG: ECSE_1063 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 62 358 419 419 122 100.0 3e-27 MASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPPELFAQAYKLNNKEMNAQLDYLNRYA IY >gi|299856422|gb|ADWV01000029.1| GENE 28 30512 - 31432 1033 306 aa, chain + ## HITS:1 COG:cbpA KEGG:ns NR:ns ## COG: cbpA COG2214 # Protein_GI_number: 16128966 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Escherichia coli K12 # 1 306 1 306 306 609 99.0 1e-174 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQ RRAEYDQMWQHRNDPQFNRQFHHSDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDI EIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQG TPGENGGPNGDLWLVIHIAPHPLFDIVGHDLEIVVPVSPWEAALGAKVTVPTLKESILLT IPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPR KDWGKA >gi|299856422|gb|ADWV01000029.1| GENE 29 31432 - 31737 338 101 aa, chain + ## HITS:1 COG:no KEGG:ECO111_1110 NR:ns ## KEGG: ECO111_1110 # Name: cbpM # Def: chaperone-modulator protein CbpM # Organism: E.coli_O111_H- # Pathway: not_defined # 1 101 1 101 101 189 100.0 3e-47 MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLR HELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVTHP >gi|299856422|gb|ADWV01000029.1| GENE 30 31830 - 32429 583 199 aa, chain - ## HITS:1 COG:torD KEGG:ns NR:ns ## COG: torD COG3381 # Protein_GI_number: 16128964 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Escherichia coli K12 # 1 199 1 199 199 365 96.0 1e-101 MTTLTAQQIACIYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLAAAVNALENR IAALTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFN EPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVARCHQHDSFGF YAALSQLLLVLVECDHQNR >gi|299856422|gb|ADWV01000029.1| GENE 31 32426 - 34972 2692 848 aa, chain - ## HITS:1 COG:torA KEGG:ns NR:ns ## COG: torA COG0243 # Protein_GI_number: 16128963 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 848 1 848 848 1745 99.0 0 MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATDAVISKEGILTGSHWG AIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQ RGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALH GNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANW WCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLA LAYTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLAR QMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRK GVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMC IFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYG NHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQ GKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIAD MNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGK EPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGE PGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEY VPASQVKS >gi|299856422|gb|ADWV01000029.1| GENE 32 34972 - 36144 1028 390 aa, chain - ## HITS:1 COG:torC KEGG:ns NR:ns ## COG: torC COG3005 # Protein_GI_number: 16128962 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Escherichia coli K12 # 1 390 1 390 390 801 100.0 0 MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEE YKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRA ELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQ LPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDG DWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQ ATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLD KREERTLLKYLQMNASDTAGKAHGDKKEEK >gi|299856422|gb|ADWV01000029.1| GENE 33 36274 - 36966 783 230 aa, chain + ## HITS:1 COG:ECs1150 KEGG:ns NR:ns ## COG: ECs1150 COG0745 # Protein_GI_number: 15830404 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 230 1 230 230 439 99.0 1e-123 MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDEN GLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRI DLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRE RLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC >gi|299856422|gb|ADWV01000029.1| GENE 34 36939 - 37931 729 330 aa, chain - ## HITS:1 COG:torT KEGG:ns NR:ns ## COG: torT COG1879 # Protein_GI_number: 16128960 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli K12 # 3 330 15 342 342 634 100.0 0 MLPAFSADNLLRWHDAQHFTVQASTPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARR YGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVASLPVIELVN AIDAPQVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAI AGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTV VSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPK NADREHIRRSLSPGGFRPVYFYQHTSAAKK >gi|299856422|gb|ADWV01000029.1| GENE 35 38080 - 40794 2524 904 aa, chain + ## HITS:1 COG:torS_1 KEGG:ns NR:ns ## COG: torS_1 COG0642 # Protein_GI_number: 16128959 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli K12 # 1 650 1 650 650 1125 99.0 0 MGFALMALLTLTSTLVGWYNLRFISQVEKDNTQALIPTMNMARQLSEASAWELFAAQNLT SADNEKMWQAQGRMLTAQSLKINALLQALREQGFDTTAIEQQEQEISRSLRQQGELVGQR LQLRQQQQQLSQQIVAAADEIARLAQGQANNAATSAGATQAGIYDLIEQDQRQAAESALD RLIDIDLEYVNQMNELRLSALRVQQMVMNLGLEQIQKNAPTLEKQLNNAVKILQRRQIRI EDPGVRAQVATTLTTVSQYSDLLALFQQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDT IELRNQHGLAHLEKASARGQYSLLLLGMVSLCALILILWRVVYRSVTRPLAEQTQALQRL LDGDIDSPFPETAGVRELDTIGRLMDAFRSNVHALNRHREQLAAQVKARTAELQELVIEH RQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGE SLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADD MPCALMGDPRRIRQVITNLLSNALRFTDEGYIILRSRTDGEQWLVEVEDSGCGIDPAKLA EIFQPFVQVSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVP KTVNQAVRLDGLRLLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQALETLQNSEPFAAA LVDFDLPDVDGITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVL GQLLAHYLQLQVNNDQSLDVSQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQ DSEKIKRAAHQLKSSCSSLGMRIASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKD LNAI >gi|299856422|gb|ADWV01000029.1| GENE 36 40866 - 41939 598 357 aa, chain + ## HITS:1 COG:yccM KEGG:ns NR:ns ## COG: yccM COG0348 # Protein_GI_number: 16128958 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Escherichia coli K12 # 1 357 1 357 357 698 99.0 0 MAENKRTRWQRRPGTTGGKLPWNDWRNATTWRKATQLLLLATNIYIAITFWYWVRYYETA SSTTFVARPGGIEGWLPIAGLMNLKYSLVTGQLPSVHAAAMLLLVAFIVISLLLKKAFCS WLCPVGTLSELIGDLGNKLFGRQCVLPRWLDIPLRGVKYLLLSFFLYIALLMPAQAIHYF MLSPYSVVMDVKMLDFFRHMGTATLISVTVLLIASLFIRHAWCRYLCPYGALMGVVSLLS PFKIRRNAESCIDCGKCAKNCPSRIPVDKLIQVRTVECTGCMTCVESCPVASTLTFSLQK PAANKKAFALSGWLMTLLVLGIMFAVIGYAMYAGVWQSPVPDELYRRLIPQAPMIGH >gi|299856422|gb|ADWV01000029.1| GENE 37 41987 - 42160 261 57 aa, chain - ## HITS:1 COG:no KEGG:ECB_00994 NR:ns ## KEGG: ECB_00994 # Name: gnsA # Def: predicted regulator of phosphatidylethanolamine synthesis # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 57 1 57 57 75 100.0 4e-13 MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKMTGLESYDVKIKIM >gi|299856422|gb|ADWV01000029.1| GENE 38 42554 - 42766 307 70 aa, chain - ## HITS:1 COG:ECs1145 KEGG:ns NR:ns ## COG: ECs1145 COG1278 # Protein_GI_number: 15830399 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 70 1 70 70 133 100.0 9e-32 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR GPAAANVVTL >gi|299856422|gb|ADWV01000029.1| GENE 39 43052 - 43264 198 70 aa, chain + ## HITS:1 COG:ECs1144 KEGG:ns NR:ns ## COG: ECs1144 COG1278 # Protein_GI_number: 15830398 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Escherichia coli O157:H7 # 1 70 1 70 70 137 100.0 5e-33 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLR GPTAANVYLS >gi|299856422|gb|ADWV01000029.1| GENE 40 43706 - 44011 157 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGGVAAGAV GTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR >gi|299856422|gb|ADWV01000029.1| GENE 41 44118 - 44520 231 134 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_1027 NR:ns ## KEGG: ECIAI1_1027 # Name: ymcC # Def: putative outer membrane lipoprotein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 134 1 134 214 264 100.0 9e-70 MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQIQALPYSTMYLRLNEGQ RIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKD GSRWTRDILWSEDN Prediction of potential genes in microbial genomes Time: Sun May 15 15:50:05 2011 Seq name: gi|299856421|gb|ADWV01000030.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont29.1, whole genome shotgun sequence Length of sequence - 42200 bp Number of predicted genes - 49, with homology - 46 Number of transcription units - 33, operones - 12 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 3/0.800 - CDS 2 - 731 701 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 2 1 Op 2 . - CDS 783 - 1712 257 ## COG0582 Integrase - Prom 1791 - 1850 3.9 3 2 Op 1 . - CDS 2020 - 2235 190 ## G2583_1696 hypothetical protein 4 2 Op 2 . - CDS 2314 - 2523 128 ## ECSE_1401 hypothetical protein - Prom 2704 - 2763 2.7 - Term 2720 - 2766 4.2 5 3 Op 1 . - CDS 2767 - 3576 683 ## COG3723 Recombinational DNA repair protein (RecE pathway) 6 3 Op 2 . - CDS 3569 - 6169 1080 ## ECB_01327 exonuclease VIII, 5' -> 3' specific dsDNA exonuclease 7 4 Tu 1 . - CDS 6271 - 6546 316 ## ECO26_1920 hypothetical protein - Prom 6583 - 6642 2.7 8 5 Tu 1 . - CDS 6791 - 7012 152 ## JW1347 inhibitor of ftsZ, killing protein 9 6 Tu 1 . + CDS 7454 - 7942 153 ## APECO1_502 prophage CP-933R superinfection exclusion protein + Term 8034 - 8076 1.4 - Term 7726 - 7766 4.1 10 7 Op 1 . - CDS 7939 - 8094 60 ## B21_01342 hypothetical protein 11 7 Op 2 . - CDS 8105 - 8239 165 ## Z2402 hypothetical protein 12 8 Tu 1 . - CDS 8452 - 8946 214 ## COG1396 Predicted transcriptional regulators - Prom 9143 - 9202 3.9 + Prom 8944 - 9003 2.4 13 9 Op 1 . + CDS 9026 - 9280 72 ## APECO1_1042 putative regulatory protein 14 9 Op 2 . + CDS 9277 - 9702 407 ## SBO_0972 hypothetical protein + Term 9718 - 9746 -1.0 - Term 9515 - 9545 0.6 15 10 Tu 1 . - CDS 9713 - 9916 57 ## 16 11 Op 1 . + CDS 10257 - 10844 103 ## ECS88_1339 conserved hypothetical protein from phage origin 17 11 Op 2 . + CDS 10885 - 11307 58 ## LF82_p283 hypothetical protein + Prom 11463 - 11522 4.9 18 12 Tu 1 . + CDS 11648 - 13645 1134 ## COG1292 Choline-glycine betaine transporter + Term 13654 - 13686 3.0 19 13 Tu 1 . + CDS 13826 - 14986 461 ## COG4325 Predicted membrane protein + Term 15147 - 15177 -0.5 20 14 Op 1 . - CDS 15117 - 15998 259 ## COG0583 Transcriptional regulator 21 14 Op 2 . - CDS 15995 - 16687 356 ## COG3703 Uncharacterized protein involved in cation transport 22 14 Op 3 . - CDS 16699 - 17898 959 ## COG2814 Arabinose efflux permease - Prom 17931 - 17990 8.6 - Term 18551 - 18591 2.2 23 15 Tu 1 . - CDS 18622 - 18984 160 ## COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance + Prom 19589 - 19648 6.3 24 16 Op 1 . + CDS 19774 - 20373 349 ## Z2385 hypothetical protein 25 16 Op 2 . + CDS 20373 - 20663 150 ## ECSE_1423 hypothetical protein 26 16 Op 3 . + CDS 20747 - 21202 200 ## ECSE_1424 hypothetical protein + Prom 22163 - 22222 6.0 27 17 Tu 1 . + CDS 22377 - 22673 158 ## COG3064 Membrane protein involved in colicin uptake + Prom 22692 - 22751 1.8 28 18 Tu 1 . + CDS 22845 - 23219 144 ## EC55989_1718 putative TolA protein (fragment) of prophage + Term 23346 - 23374 1.0 + Prom 23319 - 23378 5.6 29 19 Op 1 . + CDS 23471 - 23686 231 ## APECO1_513 phage lysis protein 30 19 Op 2 . + CDS 23686 - 24183 218 ## COG3772 Phage-related lysozyme (muraminidase) 31 19 Op 3 . + CDS 24180 - 24641 365 ## G2583_0689 putative Rz endopeptidase from lambdoid prophage DLP12 - Term 24631 - 24664 5.4 32 20 Tu 1 . - CDS 24673 - 24966 279 ## ECIAI1_0779 putative lipoprotein; DLP12 prophage - Prom 24991 - 25050 3.4 + Prom 25566 - 25625 7.8 33 21 Tu 1 . + CDS 25659 - 26186 264 ## LF82_p278 prophage protein 34 22 Op 1 . + CDS 26291 - 27505 425 ## COG5525 Bacteriophage tail assembly protein 35 22 Op 2 . + CDS 27502 - 28308 276 ## EC55989_0811 putative tail fiber protein 36 22 Op 3 . + CDS 28308 - 28889 415 ## COG5525 Bacteriophage tail assembly protein + Term 28913 - 28949 -0.8 37 23 Tu 1 . - CDS 29708 - 29905 161 ## - Prom 29988 - 30047 5.0 38 24 Op 1 3/0.800 + CDS 30622 - 31905 1382 ## COG0477 Permeases of the major facilitator superfamily + Term 31914 - 31949 4.2 + Prom 31915 - 31974 3.1 39 24 Op 2 . + CDS 31994 - 33454 1323 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases - Term 33448 - 33483 5.2 40 25 Tu 1 . - CDS 33490 - 33693 373 ## ECIAI1_1560 putative selenium carrying protein - Prom 33735 - 33794 1.5 - Term 33827 - 33862 6.7 41 26 Op 1 5/0.200 - CDS 33871 - 34557 717 ## COG1802 Transcriptional regulators - Prom 34583 - 34642 5.5 - Term 34605 - 34641 3.0 42 26 Op 2 . - CDS 34646 - 35392 881 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity 43 27 Tu 1 . + CDS 35538 - 37574 1842 ## COG0339 Zn-dependent oligopeptidases - Term 37565 - 37618 2.2 44 28 Tu 1 . - CDS 37619 - 38137 235 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase - Prom 38348 - 38407 10.1 + Prom 38293 - 38352 9.1 45 29 Tu 1 . + CDS 38413 - 38805 280 ## COG3111 Uncharacterized conserved protein + Term 38817 - 38858 6.2 + Prom 38973 - 39032 6.9 46 30 Tu 1 . + CDS 39060 - 39950 447 ## COG2199 FOG: GGDEF domain + Term 40068 - 40098 2.1 - Term 40098 - 40141 10.4 47 31 Tu 1 . - CDS 40169 - 40264 78 ## - Prom 40324 - 40383 4.6 48 32 Tu 1 . - CDS 40391 - 41578 885 ## COG0477 Permeases of the major facilitator superfamily - Prom 41644 - 41703 3.7 + Prom 41557 - 41616 4.7 49 33 Tu 1 . + CDS 41773 - 42199 335 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily Predicted protein(s) >gi|299856421|gb|ADWV01000030.1| GENE 1 2 - 731 701 243 aa, chain - ## HITS:1 COG:ECs1928 KEGG:ns NR:ns ## COG: ECs1928 COG0037 # Protein_GI_number: 15831182 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Escherichia coli O157:H7 # 1 243 1 243 311 503 99.0 1e-142 MQDNQQITKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILR NLQQSAPINFSLVAVNLDQKQPGFPEHVLPEYLEKLGVEYKIVEENTYGIVKEKIPEGKT TCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDG KHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIE TMF >gi|299856421|gb|ADWV01000030.1| GENE 2 783 - 1712 257 309 aa, chain - ## HITS:1 COG:intR KEGG:ns NR:ns ## COG: intR COG0582 # Protein_GI_number: 16129306 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 1 309 103 411 411 639 100.0 0 MKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRTVD NYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQSQNLW KFAVYSGLRHGELAALAWEDVDLEKGIVNVRRNLTILDMFGPPKTNAGIRTVTLLQPALE ALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNGKQKPYYSVSSLGARWNA AVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYGMWIDDMNDEQ IAMLNARLS >gi|299856421|gb|ADWV01000030.1| GENE 3 2020 - 2235 190 71 aa, chain - ## HITS:1 COG:no KEGG:G2583_1696 NR:ns ## KEGG: G2583_1696 # Name: ydaQ # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 71 9 79 79 148 100.0 5e-35 MAQVIFNEEWMVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKRGIIWYN YPKINQFIKDS >gi|299856421|gb|ADWV01000030.1| GENE 4 2314 - 2523 128 69 aa, chain - ## HITS:1 COG:no KEGG:ECSE_1401 NR:ns ## KEGG: ECSE_1401 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 69 25 93 93 112 100.0 5e-24 MYKITATIEKEGGTPTNWTRYSKSKLTKSECEKMLSGKKEAGVSREQKVKLINFNCEKLQ SSRIALYSN >gi|299856421|gb|ADWV01000030.1| GENE 5 2767 - 3576 683 269 aa, chain - ## HITS:1 COG:recT KEGG:ns NR:ns ## COG: recT COG3723 # Protein_GI_number: 16129310 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecE pathway) # Organism: Escherichia coli K12 # 1 269 1 269 269 530 100.0 1e-150 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS MDEKEPLTIDPADSSVLTGEYSVIDNSEE >gi|299856421|gb|ADWV01000030.1| GENE 6 3569 - 6169 1080 866 aa, chain - ## HITS:1 COG:no KEGG:ECB_01327 NR:ns ## KEGG: ECB_01327 # Name: recE # Def: exonuclease VIII, 5' -> 3' specific dsDNA exonuclease # Organism: E.coli_B_REL606 # Pathway: not_defined # 1 866 1 866 866 1734 99.0 0 MSTKPLFLLRKAKKSSGEPDVVLWASNDFESTCATLDYLIVKSGKKLSSYFKAVATNFPV VNDLPAEGEIDFTWSERYQLSKDSMTWELKPGAAPDNAHYQGNTNVNGEDMTEIEENMLL PISGQELPIRWLAQHGSEKPVTHVSRDGLQALHIARAEELPAVTALAVSHKTSLLDPLEI RELHKLVRDTDKVFPNPGNSNLGLITAFFEAYLNADYTDRGLLTKEWMKGNRVSHITCTA SGANAGGGNLTDRGEGFVHDLTSLARDVATGVLARSMDLDIYNLHPAHAKRIEEIIAENK PPFSVFRNKFITMPGGLDYSRAIVVASVKEAPIGIEVIPAHVTEYLNKVLTETDHANPDP EIVDIACGRSSAPMPQRVTEEGKQDDEEKPQPSGTTAVEQGEAETMEPDATEHHQDTQPL DAQSQVNSVDAKYQELRAELHEARKNIPSKNPVDADKLLAASRGEFVDGISDPNDPKWVK GIQTRDCVYQNQPETEKTSPDMNQPEPVVQQEPEIACNACGQTGGDNCPDCGAVMGDATY QETFDEESQVEAKENDPEEMEGAEHPHNENAGSDPHRDCSDETGEVADPVIVEDIEPGIY YGISNENYHAGPGISKSQLDDIADTPALYLWRKNAPVDTTKTKTLDLGTAFHCRVLEPEE FSNRFIVAPEFNRRTNAGKEEEKAFLMECASTGKTVITAEEGRKIELMYQSVMALPLGQW LVESAGHAESSIYWEDPETGILCRCRPDKIIPEFHWIMDVKTTADIQRFKTAYYDYRYHV QDAFYSDGYEAQFGVQPTFVFLVASTTIECGRYPVEIFMMGEEAKLAGQQEYHRNLRTLS DCLNTDEWPAIKTLSLPRWAKEYAND >gi|299856421|gb|ADWV01000030.1| GENE 7 6271 - 6546 316 91 aa, chain - ## HITS:1 COG:no KEGG:ECO26_1920 NR:ns ## KEGG: ECO26_1920 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 91 17 107 107 161 100.0 7e-39 MITNYEATVVTTDDIVHEVNLEGKRIGYVIKTENKETPFTVVDIDGPSGNVKTLDEGVKK MCLVHIGKNLPAEKKAEFLATLIAMKLKGEI >gi|299856421|gb|ADWV01000030.1| GENE 8 6791 - 7012 152 73 aa, chain - ## HITS:1 COG:no KEGG:JW1347 NR:ns ## KEGG: JW1347 # Name: kil # Def: inhibitor of ftsZ, killing protein # Organism: E.coli_J # Pathway: not_defined # 1 73 1 73 73 153 100.0 2e-36 MIAHHFGTDEIPRQCVTPGDYVLHEGRTYIASANNIKKRKLYIRNLTTKTFITDRMIKVF LGRDGLPVKAESW >gi|299856421|gb|ADWV01000030.1| GENE 9 7454 - 7942 153 162 aa, chain + ## HITS:1 COG:no KEGG:APECO1_502 NR:ns ## KEGG: APECO1_502 # Name: sieB # Def: prophage CP-933R superinfection exclusion protein # Organism: E.coli_APEC # Pathway: not_defined # 1 162 42 203 203 314 100.0 6e-85 MLDVFTPLLKLFANEPLERLMYTIIIFGLTLWLIPKEFTVAFNAYTEIPWLFQIIVFAFS FVVAISFSRLRAHIQKHYSLLPEQRVLLRLSEKEIAVFKDFLKTGNLIITSPCRNPVMKK LERKGIIQHQSDSANCSYYLVTEKYSHFMKLFWNSRSRRFNR >gi|299856421|gb|ADWV01000030.1| GENE 10 7939 - 8094 60 51 aa, chain - ## HITS:1 COG:no KEGG:B21_01342 NR:ns ## KEGG: B21_01342 # Name: ydaF # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 51 1 51 51 94 100.0 9e-19 MQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTETGARRWLEKHTVS >gi|299856421|gb|ADWV01000030.1| GENE 11 8105 - 8239 165 44 aa, chain - ## HITS:1 COG:no KEGG:Z2402 NR:ns ## KEGG: Z2402 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157 # Pathway: not_defined # 1 44 16 59 59 88 100.0 7e-17 MVHYEVVQYLMDCCGITYNQAVQALRSNDWDLWQAEVAIRSNKM >gi|299856421|gb|ADWV01000030.1| GENE 12 8452 - 8946 214 164 aa, chain - ## HITS:1 COG:ECs1941 KEGG:ns NR:ns ## COG: ECs1941 COG1396 # Protein_GI_number: 15831195 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 37 138 1 102 103 174 97.0 7e-44 MVHEDKARKEFASRLALACENAGYEQHGRQAEIARRMKLTPKAVSKWFNGETIPRREKLR ELATLIGTTPTYLLGEDTEESGQVRFYQELNPRQKIIIDLLDELPDSETDELLKTLEEKK QKYNAIYEELARKKKTKSLLNQHKSGSAFLRVCASLYPISFFYT >gi|299856421|gb|ADWV01000030.1| GENE 13 9026 - 9280 72 84 aa, chain + ## HITS:1 COG:no KEGG:APECO1_1042 NR:ns ## KEGG: APECO1_1042 # Name: not_defined # Def: putative regulatory protein # Organism: E.coli_APEC # Pathway: not_defined # 1 84 25 108 108 158 100.0 7e-38 MNQKTLEDVIKTVRVAVVADVCGVSQRAIYKWMDNGKLPRTEYTGETNYAEKIALASNGL FSADAILTIGRNKTTTKKLMGVDS >gi|299856421|gb|ADWV01000030.1| GENE 14 9277 - 9702 407 141 aa, chain + ## HITS:1 COG:no KEGG:SBO_0972 NR:ns ## KEGG: SBO_0972 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii # Pathway: not_defined # 1 141 1 141 141 271 99.0 4e-72 MKIKHEHIRMAMNAWAHPDGEKVPAAKITKAYFELGMTFPELYDDSHPEALARNTQKIFR WVEKDTPDAVKKIQALLPAIEKAMPPLLVARMRSHSSAYFRELVETRERLVRDADDFVAV AIAGFNQMNRGGPAGNIVAVH >gi|299856421|gb|ADWV01000030.1| GENE 15 9713 - 9916 57 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTFRDALTRRWIYTAITVAIGCPDTLAIVRHLGSFGMSCHNLSQALAILTSFDTESFYSQ IAGSDPV >gi|299856421|gb|ADWV01000030.1| GENE 16 10257 - 10844 103 195 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1339 NR:ns ## KEGG: ECS88_1339 # Name: not_defined # Def: conserved hypothetical protein from phage origin # Organism: E.coli_S88 # Pathway: not_defined # 1 195 164 358 358 376 100.0 1e-103 MVHGVKNATNQAGDVQTVNLGQPAGTTPEADSAYALKADSGAVQQVMTARPEQSHQLQQP EADSAIQREADRVVPENTGQSVGRVDYPDVFEQVWREYPLRAGANPKKSAFSAWKARLRE GVPPEAMLDGVRRYARYLAATGKTGTEFVQRATTFFGPDRNFENPWLLPVSGTNNQRCVN HISEPDNEIPPGFRG >gi|299856421|gb|ADWV01000030.1| GENE 17 10885 - 11307 58 140 aa, chain + ## HITS:1 COG:no KEGG:LF82_p283 NR:ns ## KEGG: LF82_p283 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_LF82 # Pathway: not_defined # 1 140 1 140 140 241 95.0 6e-63 MAKVFTQEEREKIKGQVLELVRQSGRETLRQLEAKTGATRYLMSVLARELVASGDVYNSG YGLFPSEQARKDWQNARKKLSRAKLKKPVVVDPDLIWSLPDGEIRRYDSRLNIICRECRK SEVMQRILSFYQGDVRYLLK >gi|299856421|gb|ADWV01000030.1| GENE 18 11648 - 13645 1134 665 aa, chain + ## HITS:1 COG:PA5291 KEGG:ns NR:ns ## COG: PA5291 COG1292 # Protein_GI_number: 15600484 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Pseudomonas aeruginosa # 7 665 3 661 661 870 66.0 0 MSENDTTPKKSTSQINKAVFFTSALLIFLLVAFAAVFPDVADKNFKLLQQQIFTNASWFY ILAVALILLSVTFLGLSRYGDIKLGPDHAQPDFSYHSWFAMLFSAGMGIGLMFFGVAEPV MHYLSPPVGTPETVAAAKEAMRLTFFHWGLHAWAIYAIVALILAFFSYRHGLPLTLRSAL YPIIGDRIYGPIGHAVDIFAVIGTVFGVATSLGYGVLQVNAGLNHLFGVPINETVQVILI VVITGLATISVVSGLDKGIRILSELNLGLAVLLLALVLCLGPTVLLLKSFVENTGGYLSE LVSKTFNLYAYEPKSSNWLGGWTLLYWGWWLSWSPFVGMFIARVSRGRTIREFVTGVLFV PAGFTLMWMTVFGNSAIYLIMNQGATDLANTVQQDVALALFNFLEHFPFSSVLSFIAMAM VIVFFVTSADSGAMVVDTLASGGVANTPVWQRIFWASLMGVVAIALLIAGGLSALQTVTI ASALPFSVILLISIYGLLKALRRDLTKRESLSMATIAPTAARNPIPWQRRLRNIAYLPKR SLVKRFMDDIIQPAMTLVQEELNKQGTISHISDAAEDRIRLEVDLGNELNYIYEVRLRGY NSPTFALAALDNDEQQSEQHRYYRAEVYLKEGGQNYDVMGWNQEQLINDILDQYEKHLHF LHLVR >gi|299856421|gb|ADWV01000030.1| GENE 19 13826 - 14986 461 386 aa, chain + ## HITS:1 COG:PM1097 KEGG:ns NR:ns ## COG: PM1097 COG4325 # Protein_GI_number: 15602962 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pasteurella multocida # 10 377 49 413 417 211 33.0 2e-54 MIPESVSVKVGAEAVDNILNILASSMLAVTTFSLSIMVTAYGSATTNVTPRATRLVVEDV TTQNVLATFIGSFLFSLVGIIALNMGAYGERGRVILFIVTLVVIALILITLLRWIQHLTS LGRVGETTAKVEQAAIETFIARARNPCLGGYPWLENNEQPKGTVAVYPKKIGYVEYVDMV KLSKLLTNDPRHVYLVAQPGSFIHPSTPVLYLSQGQESSISTDLLETIIVSDVRSFAQDP RFCLSVMAEIACRALSPAVNDPGTAIDVIGRGVRILSAYAQNKSDEIEVKYPSVHVAPLQ NNDLLEDFFSPVARDGASMREIQIRVLKGLSMLSKGWPGIFAEAAQTLAFETLEHATRAD HIDSDRYLIKSIYYNLFSGEDSNKKP >gi|299856421|gb|ADWV01000030.1| GENE 20 15117 - 15998 259 293 aa, chain - ## HITS:1 COG:RSc0160 KEGG:ns NR:ns ## COG: RSc0160 COG0583 # Protein_GI_number: 17544879 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 257 1 267 308 91 28.0 2e-18 MSHLSHLRTFLEAYRSGSFSKAAELLGITQPAASQHIQSLETLVGKRLFIRQARGVTATE AADELARSVSPFIDGLEEKLSSFRSGSVRGGTINLAGPPDFIHSRLGTVMAPLMKEGYRL RFHTGNKQRIYSLLHDGSADLAVTASMPDDRLYGYAHLLTERMLLVHAPAMSEIIGSEPG AETLASLPLIAYDEELPLIRALWASMFQRAPEMQATFTIPDLRIIRDLVCDGHGWTVLPD YHCDNDLKSGRLISVTPADLAPTNHLYLVWNKRTANNSRTAYVRDYILKTFPR >gi|299856421|gb|ADWV01000030.1| GENE 21 15995 - 16687 356 230 aa, chain - ## HITS:1 COG:ZchaC KEGG:ns NR:ns ## COG: ZchaC COG3703 # Protein_GI_number: 15801449 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in cation transport # Organism: Escherichia coli O157:H7 EDL933 # 1 216 1 215 231 199 44.0 4e-51 MLTRENMLNGTFVRVHEALLPANMLWDAEKIRASMNSTLEERPTGAPVWIFAYGSLMWNP VLAIEEMQRARLKGWQRSFCIRLISGRATPDVPGRMLSLDEGGITEGIAFRLPESTLINE LEIVWTREMITGLYRPVWADVSLGNGKEIQALAFVSDRLHPHYEQDNLTATVALSIASAR GDIGTNADYVWKLQATLGALGIRDDYVSELALALHEAPCNDKLHQRGASL >gi|299856421|gb|ADWV01000030.1| GENE 22 16699 - 17898 959 399 aa, chain - ## HITS:1 COG:STM0257 KEGG:ns NR:ns ## COG: STM0257 COG2814 # Protein_GI_number: 16763640 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Salmonella typhimurium LT2 # 1 379 1 376 391 207 38.0 3e-53 MPFVIYVFTISAFALGLAEFVPIGLTDVMAQGLCVGVEQTGAAVTTYALGATFAAPVLSA LTASWSRKNVMLTTAVVFTAGSLAAAFAATLPQLLLARFIAGLGHGLFLAAASSTAARLA GPGKAGRAVAVVFGGFTLAMAIGVPLSTWLGGVVSWRPVLGAIAAFGAFGFLGLLFGMKD PVRSVPGEHSDSAMQNIGMLFNRKLLAGALVTVLAYAGSFTDYTFIAPILTQVTGVTGAT VSLFMLVYGITAAVGNILGGKLTDSMGVNRANILIISGIVVVVLGMWLLSSSPVSMGILV ALLGMVTFAAVPALQARLIGVAEQHAPHAHGVAAGLNIAGFNSGIALGSVLGSITISHAG IVYTGISGAIVSLLGLLLLLAQIRRSHSRKFQQVKIVGQ >gi|299856421|gb|ADWV01000030.1| GENE 23 18622 - 18984 160 120 aa, chain - ## HITS:1 COG:STM1808 KEGG:ns NR:ns ## COG: STM1808 COG3615 # Protein_GI_number: 16765149 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein/domain, possibly involved in tellurite resistance # Organism: Salmonella typhimurium LT2 # 9 120 1 112 113 189 79.0 9e-49 MHVFDEVVMTHKRIPKDWVIKRSTPFFTKENVPSALLTHHNTAAGVFGQLCVMEGTVTYY GFTDENATEPEIKVVINAGAFATSPPQYWHRVELSDDAQFNINFWVAPDFSGEKVYSTKK >gi|299856421|gb|ADWV01000030.1| GENE 24 19774 - 20373 349 199 aa, chain + ## HITS:1 COG:no KEGG:Z2385 NR:ns ## KEGG: Z2385 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157 # Pathway: not_defined # 1 199 1 199 199 403 100.0 1e-111 MAHIQLVKQTSSGLLLPATPESCDFLHQIKIGEWIHADFKRVRNYAFHKRFFKLLQLGFD YWTPVGGAITPRERELLSGFVDYLCESVGREHTPALSDAAEQYLNTVATRRTRDTALLKS FEAFREWVTIQAGFYTEHIYPDGSRGRRAKSIAFANMDEVEFQQVYKSVLNVLWNWILFR KFSSQEEVENVAAQLLEFA >gi|299856421|gb|ADWV01000030.1| GENE 25 20373 - 20663 150 96 aa, chain + ## HITS:1 COG:no KEGG:ECSE_1423 NR:ns ## KEGG: ECSE_1423 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 96 1 96 96 192 100.0 2e-48 MVNLRKAAKGQMCQIRIPGYCNHNPETSVLAHYRLAGTCGTATKPHDMQAAIACSSCHDL IDGRVKTSDYTKEELRLMHAEGVFRTQEIWRKKGHL >gi|299856421|gb|ADWV01000030.1| GENE 26 20747 - 21202 200 151 aa, chain + ## HITS:1 COG:no KEGG:ECSE_1424 NR:ns ## KEGG: ECSE_1424 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 151 30 180 180 294 99.0 6e-79 MWGRWSYIGGGRSGNMFNQLLASKKLTKTAINEALRRMKKAGIEKAELEAFLREMINGKQ KSWLAHCTDAEALCIDRVISEVLAEHPGLICILRQRYEGRGMTKRKMAELLNDGHPEWCF STCEKRIANWLAVAEYALYIPMRESFAEKMA >gi|299856421|gb|ADWV01000030.1| GENE 27 22377 - 22673 158 98 aa, chain + ## HITS:1 COG:tolA KEGG:ns NR:ns ## COG: tolA COG3064 # Protein_GI_number: 16128714 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane protein involved in colicin uptake # Organism: Escherichia coli K12 # 13 98 336 421 421 93 60.0 8e-20 MSSSERTSDVSEDIRLYAHQIKSAIEKQFGDASKYSGKECTLRMHMAPNGLLLEVKRESG DLDLCREAMNAIKNADIPAPPSPEVYKVFQNGVLDFKP >gi|299856421|gb|ADWV01000030.1| GENE 28 22845 - 23219 144 124 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1718 NR:ns ## KEGG: EC55989_1718 # Name: not_defined # Def: putative TolA protein (fragment) of prophage # Organism: E.coli_55989 # Pathway: not_defined # 1 124 8 131 131 252 100.0 3e-66 MLTFWVGFVAGCTPLHPSDCHKTTATGSCSSGRWDDQDEWGAQARGIRAAINAKLDEPHN WKGKKCRLHMEFSQDGTALKISTSNGDKAYCEAIKSAAHKAKFPAFNNPEVYRDFQKSGF DMRG >gi|299856421|gb|ADWV01000030.1| GENE 29 23471 - 23686 231 71 aa, chain + ## HITS:1 COG:no KEGG:APECO1_513 NR:ns ## KEGG: APECO1_513 # Name: not_defined # Def: phage lysis protein # Organism: E.coli_APEC # Pathway: not_defined # 1 71 30 100 100 131 92.0 7e-30 MKSMDKISTDIAYGTSAGSAGYWFLQLLDRVTPSQWAAIGVLGSLVFGLLTYLTNLYFKI KEDKRKAARGE >gi|299856421|gb|ADWV01000030.1| GENE 30 23686 - 24183 218 165 aa, chain + ## HITS:1 COG:ybcS KEGG:ns NR:ns ## COG: ybcS COG3772 # Protein_GI_number: 16128538 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Escherichia coli K12 # 1 165 1 165 165 307 97.0 5e-84 MPPSLRKVVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDI MFGKTYTKAECKALLNKDLATVARQINPYIKVDIPETMRGALYSFVYNVGAGNFRTSTLL RKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREICLWGQQ >gi|299856421|gb|ADWV01000030.1| GENE 31 24180 - 24641 365 153 aa, chain + ## HITS:1 COG:no KEGG:G2583_0689 NR:ns ## KEGG: G2583_0689 # Name: rzpD # Def: putative Rz endopeptidase from lambdoid prophage DLP12 # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 153 5 157 157 249 99.0 2e-65 MNRVTAIISALVICIIVGLSWAVNHYRDNAITYKAQRDKNARELKLANAAITDMQMRQRD VAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLA DTAERDYFTLRERLITMQKQLEGTQKYINEQCR >gi|299856421|gb|ADWV01000030.1| GENE 32 24673 - 24966 279 97 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0779 NR:ns ## KEGG: ECIAI1_0779 # Name: borD # Def: putative lipoprotein; DLP12 prophage # Organism: E.coli_IAI1 # Pathway: not_defined # 1 97 17 113 113 180 98.0 2e-44 MKKMLFSAALAMLITGCAQQTFTVGNKPTAVTPKETITHHFFVSGIGQEKTVDAAKICGG AENVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSQ >gi|299856421|gb|ADWV01000030.1| GENE 33 25659 - 26186 264 175 aa, chain + ## HITS:1 COG:no KEGG:LF82_p278 NR:ns ## KEGG: LF82_p278 # Name: not_defined # Def: prophage protein # Organism: E.coli_LF82 # Pathway: not_defined # 1 175 1 175 175 333 100.0 1e-90 MSNVSGIGDAYYWSVFKIAEAFGLHRDTVKKRLLAANTPVAATVRGNPVYALQHVGPALF SVKHEAADSVHDPSRMEPKERKDWYQSENERIKLEKEQRKLIPVDEVVIVYSSMRKAVVQ VLETIPDVLERDCALTPQAVGVVQQAIDDLRYTLQEKSYEACAAELIPDEEGESL >gi|299856421|gb|ADWV01000030.1| GENE 34 26291 - 27505 425 404 aa, chain + ## HITS:1 COG:ECs0825 KEGG:ns NR:ns ## COG: ECs0825 COG5525 # Protein_GI_number: 15830079 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli O157:H7 # 1 394 34 427 700 654 80.0 0 MRVPKGAGNSVPWDPELTPYIIEPMNCLASREYDAVIFVGPARTGKTIGLIDGWIVYTIV CDPSDMLVVQMTEDKAREHSKKRLDRTFRSSAAVKKRMSPRRNDNNVHDKTFRDGSFLKI GWPSVNIMSSSDYRFVALTDYDRFPENIDSEGDGFSLASKRTTTFMSAGMTLVESSPGRD ICDSKWRRKSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGEYFQPAMDAMTGYRNEPDPF KASEAAYLLCPHCSGIITAEKKRELNSAGVWLREGQVIDRNGNVSGEPRRSRIASFWMEG PAAAYQAWAQLVYKLLTAEQEYEATGREETLRAVINTDWGLPYLPRASMEQRKSELLEQR AEPVPSRSVPDGVNFLVATVDVQAGRHRRFVVQVPESEVAGPCR >gi|299856421|gb|ADWV01000030.1| GENE 35 27502 - 28308 276 268 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0811 NR:ns ## KEGG: EC55989_0811 # Name: not_defined # Def: putative tail fiber protein # Organism: E.coli_55989 # Pathway: not_defined # 25 268 783 1026 1026 363 97.0 5e-99 MKAHYRNGGLFYRSSRDGYGFEEGWAEVYTSKNLPPESYPVGAPIPWPSDTVPSGYALMQ GQTFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTD LGTKTTSSFDYGTKSTNNTGAHTHSISGTANSAGAHQHKSSGAFGGTNTSIFPNGYTAIS NLSAGIMSTTSGSGQTRNAGKTSSDGAHTHSLSGTAASAGAHAHTVGIGAHTHSVAIGSH GHTITVNAAGNAENTVKNIAFNYIVRLA >gi|299856421|gb|ADWV01000030.1| GENE 36 28308 - 28889 415 193 aa, chain + ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 50 192 103 245 247 268 93.0 5e-72 MAFRMSEQARTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNS DEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPGGEYQKWNGTAWVKDTEA EKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEEISLLEAWKKYRVLLNRVNTT TAPDIEWPVAPIG >gi|299856421|gb|ADWV01000030.1| GENE 37 29708 - 29905 161 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDGESFNFDDNDIEFIASMYASCKLSGSIAPIMHIMVSIPKNKKKQFYERVEHYCSLYSN KNPPS >gi|299856421|gb|ADWV01000030.1| GENE 38 30622 - 31905 1382 427 aa, chain + ## HITS:1 COG:ydfJ KEGG:ns NR:ns ## COG: ydfJ COG0477 # Protein_GI_number: 16129502 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 427 1 427 427 788 100.0 0 MDFQLYSLGAALVFHEIFFPESSTAMALILAMGTYGAGYVARIVGAFIFGKMGDRIGRKK VLFITITMMGICTTLIGVLPTYAQIGVFAPILLVTLRIIQGLGAGAEISGAGTMLAEYAP KGKRGIISSFVAMGTNCGTLSATAIWAFMFFILSKEELLAWGWRIPFLASVVVMVFAIWL RMNLKESPVFEKVNDSNQPTAKPAPAGSMFQSKSFWLATGLRFGQAGNSGLIQTFLAGYL VQTLLFNKAIPTDALMISSILGFMTIPFLGWLSDKIGRRIPYIIMNTSAIVLAWPMLSII VDKSYAPSTIMVALIVIHNCAVLGLFALENITMAEMFGCKNRFTRMAISKEIGGLIASGF GPILAGIFCTMTESWYPIAIMIMAYSVIGLISALKMPEVKDRDLSALEDAAEDQPRVVRA AQPSRSL >gi|299856421|gb|ADWV01000030.1| GENE 39 31994 - 33454 1323 486 aa, chain + ## HITS:1 COG:ydfI KEGG:ns NR:ns ## COG: ydfI COG0246 # Protein_GI_number: 16129501 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli K12 # 1 486 1 486 486 974 98.0 0 MGNNLLSAKATLPVYDRNNLAPRIVHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLI GGEQQIADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQMDGLETVLAAMCEPQIAIV SLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATGVIVEALARRKAAGLPAFTVM SCDNMPENGHVMRDVVTSYAQAVDEKLAQWIEDNVTFPSTMVDRIVPAVTEDTLAKIEQL TGVGDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPYEEMKLRMLNGSHSFLA YLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAPTLKVQGVDLQDYANRLIARYSNPALR HRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVAGWMRYVGGVDEQGNPIEISD PLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNSLFTAKVTEAYLSLLAHGAKATV AKYSVK >gi|299856421|gb|ADWV01000030.1| GENE 40 33490 - 33693 373 67 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_1560 NR:ns ## KEGG: ECIAI1_1560 # Name: ydfZ # Def: putative selenium carrying protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 67 1 67 67 114 100.0 1e-24 MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLD LIRLGMN >gi|299856421|gb|ADWV01000030.1| GENE 41 33871 - 34557 717 228 aa, chain - ## HITS:1 COG:ECs2149 KEGG:ns NR:ns ## COG: ECs2149 COG1802 # Protein_GI_number: 15831403 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 228 1 228 228 414 100.0 1e-116 MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLA ENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQ RIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEML LRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE >gi|299856421|gb|ADWV01000030.1| GENE 42 34646 - 35392 881 248 aa, chain - ## HITS:1 COG:ydfG KEGG:ns NR:ns ## COG: ydfG COG4221 # Protein_GI_number: 16129498 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Escherichia coli K12 # 1 248 1 248 248 504 100.0 1e-143 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAA IEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPG MVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLV GGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSY AGLNVHRQ >gi|299856421|gb|ADWV01000030.1| GENE 43 35538 - 37574 1842 678 aa, chain + ## HITS:1 COG:ECs2147 KEGG:ns NR:ns ## COG: ECs2147 COG0339 # Protein_GI_number: 15831401 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Escherichia coli O157:H7 # 1 678 4 681 681 1315 99.0 0 MNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIAAIALNPQTPDFNNTILALE QSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAELANDIYLNGELFARVDAVWQRR ESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKVLNTEAATLTSQFNQRLLAANKSG GLVVNDIAQLAGMSEQEIALAAVAAREKGLDNKWLIPLLNTTQQPALAEMRDRATREKLF IAGWTRAEKNDGNDTRAIIQRLVEIRAQQAKLLGFPHYAAWKIADQMAKTPEAALNFMRE IVPAARQRASDELASIQAVIDKQQGGFSAQPWDWAFYAEQVRREKFDLDEAQLKPYFELN TVLNEGVFWTANQLFGIKFVERFDIPVYHPDVRVWEIFDHNGVGLALFYGDFFARDSKSG GAWMGNFVEQSTLNETHPVIYNVCNYQKPAAGEPALLLWDDVITLFHEFGHTLHGLFARQ RYATLSGTNTPRDFVEFPSQINEHWATHPQVFARYARHYQSGAAMPDELQQKMRNASLFN KGYEMSELLSAALLDMRWHCLEENEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHI FGGGYAAGYYAYLWTQMLADDGYQWFVEQGGLTRENGQRFREAILSRGNSEDLERLYRQW RGKAPQIMPMLQHRGLNI >gi|299856421|gb|ADWV01000030.1| GENE 44 37619 - 38137 235 172 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 18 172 747 902 904 95 36 6e-19 MNINKDKIVQLADTDTIENLTSALSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFY GAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAIERADADVSIAITGYGGPE GGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAVRFALVQLLQLLL >gi|299856421|gb|ADWV01000030.1| GENE 45 38413 - 38805 280 130 aa, chain + ## HITS:1 COG:ydeI KEGG:ns NR:ns ## COG: ydeI COG3111 # Protein_GI_number: 16129495 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 130 1 130 130 243 98.0 9e-65 MKFQAIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKNMHD GASVSLRGNLISHKGEDRYVFRDKSGEINAVIPAAVFDGREVQPDQMINISGSLDKKSAP AVVRVTHLQK >gi|299856421|gb|ADWV01000030.1| GENE 46 39060 - 39950 447 296 aa, chain + ## HITS:1 COG:ydeH_2 KEGG:ns NR:ns ## COG: ydeH_2 COG2199 # Protein_GI_number: 16129494 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 121 296 1 176 176 361 99.0 1e-99 MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDH LGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDY KIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNTEPLNLYLMLLDIDRFKLVNDTYGHLI GDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITH SEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV >gi|299856421|gb|ADWV01000030.1| GENE 47 40169 - 40264 78 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLGNMNVFMAVLGIILFSGFLAAYFSHKWDD >gi|299856421|gb|ADWV01000030.1| GENE 48 40391 - 41578 885 395 aa, chain - ## HITS:1 COG:ydeF KEGG:ns NR:ns ## COG: ydeF COG0477 # Protein_GI_number: 16129493 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 395 1 395 395 659 99.0 0 MNLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFS LGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFATVLKAW FADNLSSTSKTKIFSINYTMLNIGWTIGPPLGTLLVMQSINLPFWLAAICSAFPMLFIQI WVKRSEKIIATETGSVWSPKVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGD FAEKVVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLVGFIFSGNSLLL WGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAINPLVSGVVLTSL PPSSLFVILALVIIAAWVLMLKGIRARPWGQPALC >gi|299856421|gb|ADWV01000030.1| GENE 49 41773 - 42199 335 142 aa, chain + ## HITS:1 COG:ECs2140 KEGG:ns NR:ns ## COG: ECs2140 COG0697 # Protein_GI_number: 15831394 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 142 1 142 299 217 98.0 5e-57 MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNL LLGYGLTISFAQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLHGKQLAGI ALAIFGVLVLIEDSLNGQHVAM Prediction of potential genes in microbial genomes Time: Sun May 15 15:51:28 2011 Seq name: gi|299856420|gb|ADWV01000031.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont30.1, whole genome shotgun sequence Length of sequence - 42250 bp Number of predicted genes - 36, with homology - 36 Number of transcription units - 19, operones - 8 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 68 - 472 433 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 475 - 525 4.3 - Term 463 - 513 7.3 2 2 Tu 1 . - CDS 517 - 930 250 ## COG2188 Transcriptional regulators - Prom 1104 - 1163 3.7 + Prom 1160 - 1219 2.6 3 3 Op 1 10/0.000 + CDS 1414 - 1725 377 ## COG1440 Phosphotransferase system cellobiose-specific component IIB + Prom 1727 - 1786 3.8 4 3 Op 2 13/0.000 + CDS 1840 - 3162 721 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 5 3 Op 3 . + CDS 3190 - 3501 361 ## COG1447 Phosphotransferase system cellobiose-specific component IIA + Term 3505 - 3544 6.0 6 4 Op 1 1/0.857 + CDS 3557 - 5230 1314 ## COG4580 Maltoporin (phage lambda and maltose receptor) 7 4 Op 2 . + CDS 5255 - 6694 989 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Term 6698 - 6749 -0.8 8 5 Op 1 . - CDS 6751 - 6969 135 ## SbBS512_E1673 hypothetical protein 9 5 Op 2 3/0.429 - CDS 7001 - 7384 304 ## COG2207 AraC-type DNA-binding domain-containing proteins 10 5 Op 3 . - CDS 7404 - 7754 399 ## COG1846 Transcriptional regulators - Prom 7782 - 7841 7.1 + Prom 7874 - 7933 5.4 11 6 Tu 1 . + CDS 7966 - 8631 717 ## COG2095 Multiple antibiotic transporter + Term 8636 - 8661 -0.5 - Term 8620 - 8653 3.8 12 7 Tu 1 . - CDS 8656 - 9846 954 ## COG2814 Arabinose efflux permease - Prom 9879 - 9938 6.6 13 8 Tu 1 . - CDS 9996 - 10703 287 ## EcHS_A1609 hypothetical protein - Prom 10858 - 10917 4.8 14 9 Tu 1 . - CDS 11188 - 12069 763 ## COG0583 Transcriptional regulator - Prom 12102 - 12161 3.8 + Prom 12051 - 12110 2.5 15 10 Op 1 3/0.429 + CDS 12170 - 13558 1377 ## COG1012 NAD-dependent aldehyde dehydrogenases 16 10 Op 2 . + CDS 13634 - 14548 648 ## COG2066 Glutaminase 17 10 Op 3 . + CDS 14548 - 14907 275 ## B21_01491 hypothetical protein + Prom 14930 - 14989 3.4 18 11 Tu 1 . + CDS 15046 - 16464 1277 ## COG2199 FOG: GGDEF domain + Prom 16466 - 16525 3.4 19 12 Tu 1 . + CDS 16691 - 18142 1770 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases + Term 18159 - 18192 3.8 + Prom 18173 - 18232 3.9 20 13 Tu 1 . + CDS 18349 - 19263 682 ## COG3781 Predicted membrane protein 21 14 Op 1 3/0.429 - CDS 19267 - 20025 609 ## COG4106 Trans-aconitate methyltransferase 22 14 Op 2 5/0.286 - CDS 20082 - 20372 359 ## COG1359 Uncharacterized conserved protein 23 14 Op 3 6/0.286 - CDS 20396 - 21271 889 ## COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 24 14 Op 4 16/0.000 - CDS 21298 - 22320 1101 ## COG1879 ABC-type sugar transport system, periplasmic component 25 14 Op 5 11/0.000 - CDS 22332 - 23324 1102 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 26 14 Op 6 21/0.000 - CDS 23324 - 24352 1004 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 27 14 Op 7 . - CDS 24346 - 25881 174 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 26119 - 26178 4.9 + Prom 25947 - 26006 6.2 28 15 Op 1 5/0.286 + CDS 26130 - 27083 916 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain 29 15 Op 2 . + CDS 27162 - 28754 1139 ## COG1070 Sugar (pentulose and hexulose) kinases + Term 28760 - 28805 -0.9 + Prom 29054 - 29113 7.3 30 16 Tu 1 . + CDS 29285 - 34705 4052 ## COG3468 Type V secretory pathway, adhesin AidA + Term 34715 - 34751 7.1 + Prom 34816 - 34875 5.4 31 17 Op 1 8/0.143 + CDS 34914 - 35180 270 ## COG1396 Predicted transcriptional regulators 32 17 Op 2 2/0.571 + CDS 35180 - 36502 579 ## COG3550 Uncharacterized protein related to capsule biosynthesis enzymes + Prom 37177 - 37236 5.6 33 18 Tu 1 . + CDS 37454 - 38017 310 ## COG3539 P pilus assembly protein, pilin FimA + Term 38059 - 38105 -0.4 + Prom 38161 - 38220 4.0 34 19 Op 1 10/0.000 + CDS 38378 - 39088 425 ## COG3121 P pilus assembly protein, chaperone PapD 35 19 Op 2 6/0.286 + CDS 39130 - 41781 949 ## COG3188 P pilus assembly protein, porin PapC 36 19 Op 3 . + CDS 41795 - 42248 299 ## COG3539 P pilus assembly protein, pilin FimA Predicted protein(s) >gi|299856420|gb|ADWV01000031.1| GENE 1 68 - 472 433 134 aa, chain + ## HITS:1 COG:ECs2140 KEGG:ns NR:ns ## COG: ECs2140 COG0697 # Protein_GI_number: 15831394 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 134 166 299 299 215 94.0 1e-56 MSHSTRPAVMSLVIWSALIPIIPFFVASLILDGSASMIHSLVTIDMTTILSLMYLAFVAT IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYIN VFGLRWRKAVKVRG >gi|299856420|gb|ADWV01000031.1| GENE 2 517 - 930 250 137 aa, chain - ## HITS:1 COG:ECs4624 KEGG:ns NR:ns ## COG: ECs4624 COG2188 # Protein_GI_number: 15833878 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 3 137 98 232 238 105 35.0 2e-23 MKFEVQDASPTIATELNLVTGEQVYYIKRLRFIEDNAAQLEETWMSVARFPDLTVSHMQK SKFSYIENECGIKIIGTFETFSPTFPTPEIASILRISPRDPILKIQTQAVDSNSIPLDYS LLYSNIFEFQVKYFFPR >gi|299856420|gb|ADWV01000031.1| GENE 3 1414 - 1725 377 103 aa, chain + ## HITS:1 COG:lin2905 KEGG:ns NR:ns ## COG: lin2905 COG1440 # Protein_GI_number: 16801964 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 97 1 95 100 100 57.0 5e-22 MKKILLVCAAGMSTSMLVKRMIDHANAISLEVNISALAIAEAKGKIKNNEVDVVLLGPQV RFQKPEIEAVAQGKMPVAVIEMKDYGTMNGQAVLEFAMKLLQE >gi|299856420|gb|ADWV01000031.1| GENE 4 1840 - 3162 721 440 aa, chain + ## HITS:1 COG:lin2906 KEGG:ns NR:ns ## COG: lin2906 COG1455 # Protein_GI_number: 16801965 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 1 433 1 433 450 571 69.0 1e-163 MGLMASFERGMERFLVPVAIKLNSQKHVAAVRDGFVFTFPIIMASSLIILINFAILSPDG FIAGLLHLNSIFPNLEKAQAIFTPVMNGSVNIMSIMIAFLVARNMAISYEQDDLLCGLTA IGAFFIVYTPYQMIDGQAFLTTKYLGAQGLFVAVIVALITSEIFCRLARNPKITITMPAA VPPAVARSFKVLLPIFFVMVFFSALNYCLALISPAGLNDLIYTLIQTPLKHMGTNIFAVI ILGAVGNFLWVLGIHGPNTTSAIRETVFSEANLENLSWAAQHGTTWGAPYPITWTSINDA FANCGGSGMTLGLLLAIFIASKRAEYRDLAKMSFIPGIFNINEPIMFGLPIVLNPIMMVP FIMVPIVNCAIGYFFVSMEIIPPVAYAVPWTTPGPLIAFLGTGGNWLALLVGFLCLGVAT MIYLPFVIAANKVNNMTTNG >gi|299856420|gb|ADWV01000031.1| GENE 5 3190 - 3501 361 103 aa, chain + ## HITS:1 COG:YPO2680 KEGG:ns NR:ns ## COG: YPO2680 COG1447 # Protein_GI_number: 16122885 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Yersinia pestis # 3 102 16 115 115 82 51.0 2e-16 MFADEELVMELLVNAGQARSDAMEAIRCAGQKDWQGATQLMASSESACLQAHKIQTALIS QDEGCGKIKVNLILIHAQDHLMNAILCQDLAREIISLRKELHA >gi|299856420|gb|ADWV01000031.1| GENE 6 3557 - 5230 1314 557 aa, chain + ## HITS:1 COG:yieC KEGG:ns NR:ns ## COG: yieC COG4580 # Protein_GI_number: 16131588 # Func_class: G Carbohydrate transport and metabolism # Function: Maltoporin (phage lambda and maltose receptor) # Organism: Escherichia coli K12 # 20 557 19 538 538 546 52.0 1e-155 MNIKTLNVSLLSFSIITALFPLNAMATKLTIEQRLELLENELSQNKQELKATQNELGVYK SRLSTLQKSITENKYKSASLAEISATSPVADNIKNENGEQNSFTAAHTINGSQQVAVIES KGDKTTIESVTLKDISKYIKDDIGFSYQGYFRSGWGTGNHGSPQTYAAGSLGRFGNEMSG WFDLTLNQRVYNQDGKTANAVVTYDGNVGEQYNDAWFGDSANENIMQFSDIYLTTRGFLP FAPEADFWVGKHKLPQYEIQMLDWKTLTTDVAAGVGIENWALGVGLFDMSLSRDDVDVYS RDFSRTSQMNTNSVDVRYRNIPLWDDATLSLMAKYSAPNKTDQQQDNENDNSYFEMKDSW MLTSVLRQNLQRDTFNEFTLQVANNSYASSFASFSDASNTMAHGRYYYGDHTNGIAWRLI SQGEMYLTDNIIMANALVYSHGEDVYSHESGAHSDFDSIRTVIRPAWIWNTWNQTGLELG WFKQQNKTQQGVTLNESAYKTTLWHALKVGESILGSRPEIRFYGTYINILDNELSNFKFN ENSKDEFMAGIQAEVWW >gi|299856420|gb|ADWV01000031.1| GENE 7 5255 - 6694 989 479 aa, chain + ## HITS:1 COG:SP0303 KEGG:ns NR:ns ## COG: SP0303 COG2723 # Protein_GI_number: 15900236 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 1 479 1 477 478 739 71.0 0 MSGFKKGFLWGGAVAAHQLEGGWNEGGKGISIADVMTAGAHGVPREVTEGVIDGLNYPNH EAIDFYHRYKTDIQLFAEMGFKCFRTSIAWTRIFPQGDEQEPNEEGLQFYDDLFDECLKQ GMEPVVTLSHFEMPYHLVTKYGGWRNRKLIDFFIRFASTVFTRYKEKVKYWMTFNEINNQ VNFSESLCPFTNSGILYSPEEDINEREQIMYQAVHYELVASALAVQTGKSINPEFNIGCM IAMCPIYPLTCAPNDMMMATKAMHRRYWFTDVHARGYYPQHMLNYFARKGFNLDITPEDN AILASGCVDFIGFSYYMSFTTQFSPDNPQLDYVEPRDLVSNPYIDTSEWGWQIDPAGLRY SLNWFWDHFQLPLFIVENGFGAVDQRQADGTVNDHYRIDYFASHIREMKKAVVEDGVDLI GYTPWGCIDLVSAGTGEMKKRYGMIYVDKDNEGKGTLERIRKASFYWYRDLIANNGENI >gi|299856420|gb|ADWV01000031.1| GENE 8 6751 - 6969 135 72 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E1673 NR:ns ## KEGG: SbBS512_E1673 # Name: marB # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 71 1 71 79 121 100.0 7e-27 MKPLSSAIAAALILFSAQGVAEQTTQPVVTSCANVVVVPPSQEQPPFDLNHMGTGSDKSD ALGVPYYNQHAM >gi|299856420|gb|ADWV01000031.1| GENE 9 7001 - 7384 304 127 aa, chain - ## HITS:1 COG:ECs2138 KEGG:ns NR:ns ## COG: ECs2138 COG2207 # Protein_GI_number: 15831392 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli O157:H7 # 1 127 3 129 129 233 100.0 9e-62 MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRS RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLH PLNHYNS >gi|299856420|gb|ADWV01000031.1| GENE 10 7404 - 7754 399 116 aa, chain - ## HITS:1 COG:STM1520 KEGG:ns NR:ns ## COG: STM1520 COG1846 # Protein_GI_number: 16764865 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 116 1 144 144 187 73.0 3e-48 MKSTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFKVLCSIRCAACITPVEL KKVLSVDLGALTRMLDRLVCKECHQLVGQDLHQELTKNLTADEVATLEHLLKKVLP >gi|299856420|gb|ADWV01000031.1| GENE 11 7966 - 8631 717 221 aa, chain + ## HITS:1 COG:marC KEGG:ns NR:ns ## COG: marC COG2095 # Protein_GI_number: 16129488 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Escherichia coli K12 # 1 221 1 221 221 366 100.0 1e-101 MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQSLMASVYVFAIMMVAYY AGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSPEAKSKSEELEDEPSANIA FVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAPPLIFFLVAVILWGSLRSSGA IMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIKTYH >gi|299856420|gb|ADWV01000031.1| GENE 12 8656 - 9846 954 396 aa, chain - ## HITS:1 COG:ydeA KEGG:ns NR:ns ## COG: ydeA COG2814 # Protein_GI_number: 16129487 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 396 1 396 396 572 100.0 1e-163 MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGIMLTIYAWV VALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFTVLVISRIGVAFAHAIFWS ITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIVGQYFGWRMTFFAIGIGALIT LLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLTVVVVTAHYTAYSYIEPFVQNIA GFSANFATALLLLLGGAGIIGSVIFGKLGNQYASALVSTAIALLLVCLALLLPAANSEIH LGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVAMALFSGIFNIGIGAGALVGNQVSLHW SMSMIGYVGAVPAFAALIWSIIIFRRWPVTLEEQTQ >gi|299856420|gb|ADWV01000031.1| GENE 13 9996 - 10703 287 235 aa, chain - ## HITS:1 COG:no KEGG:EcHS_A1609 NR:ns ## KEGG: EcHS_A1609 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_HS # Pathway: not_defined # 1 235 137 371 371 455 99.0 1e-127 MGRVFQTGVERVLFLFLNDFIEQFPMINLGVPIKRAHTPHIEPLPPDRHTAADYLRQFDL LVLNFISRGNFVILPRLWSNSEVHRWFVNKDPNLITAILDITDGELKEDLLQSLMDSLGS NKHVLPEVCICFLSLLAEQESPHFQDFFLFFANMLLHYHQFMNPNESDLNDVLMPASLSD DKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPVRPPIPATSKTPDLPERH >gi|299856420|gb|ADWV01000031.1| GENE 14 11188 - 12069 763 293 aa, chain - ## HITS:1 COG:ECs2133 KEGG:ns NR:ns ## COG: ECs2133 COG0583 # Protein_GI_number: 15831387 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 293 1 293 293 583 98.0 1e-166 MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELGVDLFIRENQRLRLSPA GHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAVRIPATLAEFNHRYPKIQF SLSTGPSGTMLEGVLEGKLNAAFIDGPINHTAIDGIPVYREELMIVTPQGHAPVIRASQV NGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESYHGMLACVVAGAGIALIPRSMLE SMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLEAFIQLLDVPDSAKQGYQ >gi|299856420|gb|ADWV01000031.1| GENE 15 12170 - 13558 1377 462 aa, chain + ## HITS:1 COG:yneI KEGG:ns NR:ns ## COG: yneI COG1012 # Protein_GI_number: 16129484 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 462 9 470 470 887 99.0 0 MTITPATHAISINPATGEQLSVLPWAGANDIENALQLAAAGFRDWRETNIDYRAEKLRGI GKALRARSEEMAQMITREMGKPINQARAEVAKSANLCDWYAEHGPAMLKAEPTLVENQQA VIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLKHAPNVMGCAQLIAQVFKDAG IPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDP FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDP RDEENALGPMARFDLRDELHHQVEKTLAQGARLLLGGEKMAGAGNYYPPTVLANVTPEMT AFREEMFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFIN GYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDRI >gi|299856420|gb|ADWV01000031.1| GENE 16 13634 - 14548 648 304 aa, chain + ## HITS:1 COG:ECs2131 KEGG:ns NR:ns ## COG: ECs2131 COG2066 # Protein_GI_number: 15831385 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Escherichia coli O157:H7 # 1 304 5 308 308 610 99.0 1e-174 MDNAILGNILRQVRPLIGQGKVADYIPALATVDGSRLGIAICTVDGQLFQAGDAQERFSI QSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLVQLEMEQGIPRNPFINAGALVVC DMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARSEFEHSARNAAIAWLMKSFGNFHHD VTTVLQNYFHYCALKMSCVELARTFVFLANQGKAIHIDEPVVTPMQARQINALMATSGMY QNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAIAVWSPELDDAGNSLAGIAVLEQLTKQLG RSVY >gi|299856420|gb|ADWV01000031.1| GENE 17 14548 - 14907 275 119 aa, chain + ## HITS:1 COG:no KEGG:B21_01491 NR:ns ## KEGG: B21_01491 # Name: yneG # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 119 1 119 119 239 100.0 3e-62 MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGK QTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVVQMNQP >gi|299856420|gb|ADWV01000031.1| GENE 18 15046 - 16464 1277 472 aa, chain + ## HITS:1 COG:Z2182_2 KEGG:ns NR:ns ## COG: Z2182_2 COG2199 # Protein_GI_number: 15801615 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 EDL933 # 288 472 1 185 185 387 100.0 1e-107 MHVHPISTFRLFQEGHLLRNSIAIFALTTLFYFIGAELRLVHELSLFWPLNGVMAGVFAR YVWLNRLHYYAISYVAMLVYDAITTEWGLVSLVINFSNMMFIVTVALLVVRDKRLGKNKY EPVSALRLFNYCLIAALLCAIVGAIGSVSIDSLDFWPLLADWFSEQFSTGVLIVPCMLTL AIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTF VTGAVEIVLVANSVIDISVGSPFSIPEMFSARLGIATMAICPIMVSFSVAAINSLMKQVA LRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSV FARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYL TVSIGVGSGRASYRTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMRYGEEVV >gi|299856420|gb|ADWV01000031.1| GENE 19 16691 - 18142 1770 483 aa, chain + ## HITS:1 COG:ECs2128 KEGG:ns NR:ns ## COG: ECs2128 COG0246 # Protein_GI_number: 15831382 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Escherichia coli O157:H7 # 1 483 1 483 483 991 99.0 0 MKTLNRRDFPGAQYPERIIQFGEGNFLRAFVDWQIDLLNEHTDLNSGVVVVRPIETSFPP SLSTQDGLYTTIIRGLNEKGEAVSDARLIRSVNREISVYSEYDEFLKLAHNPEMRFVFSN TTEAGISYHAGDKFDDAPAVSYPAKLTRLLFERFSHFNGALDKGWIIIPCELIDYNGDAL RELVLRYAQEWALPEAFIQWLDQANSFCSTLVDRIVTGYPRDEVAKLEEELGYHDGFLDT AEHFYLFVIQGPKSLATELRLDKYPLNVLIVDDIKPYKERKVAILNGAHTALVPVAFQAG LDTVGEAMNDAEICAFVEKAIYEEIIPVLDLPRDELESFASAVTGRFRNPYIKHQLLSIA LNGMTKFRTRILPQLLAGQKAKGTLPARLTFALAALIAFYRGERNGETYPVQDDAHWLER YQQLWSQHRDRVIGTQELVAIVLAEKDYWEQDLTQVPGLVEQVANDLDAILEKGMREAVR PLC >gi|299856420|gb|ADWV01000031.1| GENE 20 18349 - 19263 682 304 aa, chain + ## HITS:1 COG:yneE KEGG:ns NR:ns ## COG: yneE COG3781 # Protein_GI_number: 16129479 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 304 18 321 321 594 99.0 1e-170 MIVRPQQHWLRRIFVWHGSVLSKISSRLLLNFLFSIAVIFMLPWYTHLGIKFTLAPFSIL GVAIAIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKTTLPDSASVREFARLQIAF AHCLRMTLRKQPQAEVLAHYLKTEDLQPVLASNSPANRILLIMGEWLAVQRRNGQLSDIL FISLNDRLNDISAVLAGCERIAYTPIPFAYTLILHRTVYLFCIMLPFALVVDLHYMTPFI SVLISYTFISLDCLAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDEAEIPAKILPDRH YQLT >gi|299856420|gb|ADWV01000031.1| GENE 21 19267 - 20025 609 252 aa, chain - ## HITS:1 COG:tam KEGG:ns NR:ns ## COG: tam COG4106 # Protein_GI_number: 16129478 # Func_class: R General function prediction only # Function: Trans-aconitate methyltransferase # Organism: Escherichia coli K12 # 1 252 1 252 252 486 97.0 1e-137 MSDWNPSLYLHFAAERSRPAVELLARVPLENIKYVADLGCGPGNSTALLHQRWPAARITG IDSSPAMIAEARSALPDCQFVEADIRNWQPEQALDLIFANASLQWLPDHYELFPHLVSLL NPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLAGVHAYYDILSEAGCEVDIWR TTYYHQMPSHQAIIDWVTATGLRPWLQDLIESEQQLFLKRYHQMLEEQYPLQENGQILLA FPRLFIVARRME >gi|299856420|gb|ADWV01000031.1| GENE 22 20082 - 20372 359 96 aa, chain - ## HITS:1 COG:ECs2125 KEGG:ns NR:ns ## COG: ECs2125 COG1359 # Protein_GI_number: 15831379 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 96 1 96 96 188 98.0 2e-48 MHVTLVEINVHEDKIDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDED AVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP >gi|299856420|gb|ADWV01000031.1| GENE 23 20396 - 21271 889 291 aa, chain - ## HITS:1 COG:yneB KEGG:ns NR:ns ## COG: yneB COG1830 # Protein_GI_number: 16129476 # Func_class: G Carbohydrate transport and metabolism # Function: DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes # Organism: Escherichia coli K12 # 1 291 1 291 291 593 98.0 1e-169 MADLDDIKDGKDFRTDQPQQNIPFTLKGCGALDWGMQSRLSRIFNPKTGNTVMLAFDHGY FQGPTTGLERIDINIAPLFEHADVLMCTRGILRSVVPPATNKPVVLRASGANSILAELSN EAVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDM VRDQRYFSLATRIAAEMGAQIIKTYYVEKGFERIVAGCPVPIVIAGGKKLPEREALEMCW QAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHHNETADRAYELYLSEKQ >gi|299856420|gb|ADWV01000031.1| GENE 24 21298 - 22320 1101 340 aa, chain - ## HITS:1 COG:ECs2123 KEGG:ns NR:ns ## COG: ECs2123 COG1879 # Protein_GI_number: 15831377 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 340 1 340 340 644 99.0 0 MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELSVDV TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK PECRSYYINQGTPAQLGGILVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAK EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIQGVG QVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF >gi|299856420|gb|ADWV01000031.1| GENE 25 22332 - 23324 1102 330 aa, chain - ## HITS:1 COG:ydeZ KEGG:ns NR:ns ## COG: ydeZ COG1172 # Protein_GI_number: 16129474 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 1 330 1 330 330 511 100.0 1e-145 MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGG IDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGLINAGLIIYTKVNPLVITL GTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLLVFWLW LHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDL GASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGAL LIVVVVGRSVSLHRQQIKEWLARRANNPLP >gi|299856420|gb|ADWV01000031.1| GENE 26 23324 - 24352 1004 342 aa, chain - ## HITS:1 COG:ydeY KEGG:ns NR:ns ## COG: ydeY COG1172 # Protein_GI_number: 16129473 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Escherichia coli K12 # 1 342 1 342 342 540 99.0 1e-153 MLKFIQNNREITALLAVVLLFALPGFLDRQYLSVQTLTMVYSSAQILILLAMGATLVMLT RNIDVSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLAGFFNGVLVAWLKIPAIVA TLGTLGLYRGIMLLWTGGKWIEGLPAELKQLSAPLLFGVSAIGWLTIILVAFMAWLLAKT AFGRSFYATGDNLQGARQLGVRTEAIRIVAFSLNGCMAALAGIVFASQIGFIPNQTGTGL EMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQIDSVLVLLRIPAWWNDFIAGLVLLAV LVFDGRLRCALERNLRRQKYARFMTPPPSVKPASSGKKREAA >gi|299856420|gb|ADWV01000031.1| GENE 27 24346 - 25881 174 511 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 268 481 1 217 245 71 26 7e-12 MQTSDTRALPLLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGI TPADSGTLEIGGNNYARLTPVHAHQLGIYLVPQEPLLFPSLSIKENILFGMAKKQLSMQK MKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPTASLTPAETERLF TRLQELLATGVGIVFISHKLPEIRQIADRISVMRDGTIALSGKTSELSTDDIIQAITPVV REKSLSASQKLWLELPGNRPQHAAGTPVLTLENLTGEGFRNVSMTLNAGEILGLAGLVGA GRTELAETLYGLRTLRGGRIMLNGKEINKLSTGERLLRGLVYLPEDRQSSGLNLDASLAW NVCALTHNLRGFWAKTAKDNATLERYRRALNIKFNQPEQAARTLSGGNQQKILIAKCLEA SPQALIVDEPTRGVDVSARNDIYQLLRSIAAQNVAVLLISSDLEEIELMADRVYVMHQGE IAHSALTGRDINVETIMRVAFGDSQRQEVSC >gi|299856420|gb|ADWV01000031.1| GENE 28 26130 - 27083 916 317 aa, chain + ## HITS:1 COG:ECs2119 KEGG:ns NR:ns ## COG: ECs2119 COG2390 # Protein_GI_number: 15831373 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Escherichia coli O157:H7 # 1 317 1 317 317 586 99.0 1e-167 MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGII RVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRLGIGAAHMLMSLLQPQQML AIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSVNIIPAPLRASS ADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGA VGDILGYFFDAKGDVVTDIKIHNELIGLPLSSLKTIPVRVGVAGGENKAEAIAAAMKGGY INALVTDQDTAAAILRS >gi|299856420|gb|ADWV01000031.1| GENE 29 27162 - 28754 1139 530 aa, chain + ## HITS:1 COG:ydeV KEGG:ns NR:ns ## COG: ydeV COG1070 # Protein_GI_number: 16129470 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 1 530 1 530 530 1081 99.0 0 MARLFTPSESKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVPGSMEFDLN KNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVLYNNEGAPIWACANVDARAAREV SELKELHNNTFENEVYRATGQTLALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYMLS GELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCG LKAGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNPHV IPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGIDTYTLLEEMASRVPPGSWGVMP IFSDRMRFKTWYHAAPSFINLSIDPDKCNKATLFRALEENAAIVSACNLQQIADFSNIHP SSLVFAGGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGVGAGIFSSMAETGER LVRWERTHTPDPEKHELYQDSRDKWQAVYQDQLGLVDHGLTTSLWKAPGL >gi|299856420|gb|ADWV01000031.1| GENE 30 29285 - 34705 4052 1806 aa, chain + ## HITS:1 COG:ydeU KEGG:ns NR:ns ## COG: ydeU COG3468 # Protein_GI_number: 16129468 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 1341 1806 1 466 466 846 100.0 0 MNRIYRVIWNCTLQVFQACSELTRRAGKTSTVNLRKSSGLTTKFSRLTLGVLLALSGSAS GASLEVDNDQITNIDTDVAYDAYLVGWYGTGVLNILAGGNASLTTITTSVIGANEDSEGT VNVLGGTWRLYDSGNNARPLNVGQSGTGTLNIKQKGHVDGGYLRLGSSTGGVGTVNVEGE DSVLTTELFEIGSYGTGSLNITDKGYVTSSIVAILGYQAGSNGQVVVEKGGEWLIKNNDS SIEFQIGNQGTGEATIREGGLITAENTIIGGNATGIGTLNVQDQDSVITVRRLYNGYFGN GTLNISNNGLINNKEYSLVGVQDGSHGVVNVTDKGHWNFLGTGEAFRYIYIGDAGDGELN VSREGKVDSGIITAGMKETGTGNITVKDKNSVITNLGTNLGYDGHGEMNISNEGLVVSNG GSSLGYGETGVGNVSITTGGMWEVNKNVYTTIGVAGVGNLNISDGGKFVSQNITFLGDKA SGIGTLNLMDATSSFDTVGINVGNFGSGIVNVSNGATLNSTGYGFIGGNASGKGIVNIST DSLWNLKTSSTNAQLLQVGVLGKGELNITTGGIVKARDTQIALNDKSKGDVRVDGQNSLL ETFNMYVGTSGTGTLTLTNSGTLNVEGGEVYLGVFEPAVGTLNIGAAHGEAAADAGYITN ATKVEFGSGEGVFVFNHTNNSDAGYQVDMLITGDDKDGKVIHDAGHTVFNAGNTYSGKTL VNDGLLTIASHTADGVTGMGSSEVTIASPGTLDILASTNSAGDYTLTNALKGDGLMRVQL SSYDKMFGFTHATGTEFAGVAQLKDSTFTLERDNTAALTHAMLQSDSENTTSVKVGEQSI GGLAMNGGTLIFDTDIPAATLAEGYISVDTLVVGAGDYTWKGRNYQVNGTGDVLIDVPKP WNDPMANNPLTTLNLLEHDDSHVGVQLVKAQTVIGSGGSLTLRDLQGDEVEADKTLHIAQ NGTVVAEGDYGFRLTTAPGDGLYVNYGLKALNIHGGQKLTLAEHGGAYGATADMSAKIGG EGDLAINTVRQVSLSNGQNDYQGATYVQMGTLRTDADGALGNTRELNISNAAIVDLNGST QTVETFTGQMGSTVLFKEGALTVNKGGISQGELTGGGNLNVTGGTLAIEGLNARYNALTS ISPNAEVSLDNTQGLGRGNIANDGLLTLKNVTGELRNSISGKGIVSATARTDVELDGDNS RFVGQFNIDTGSALSVNEQKNLGDASVINNGLLTISTERSWAMTHSISGSGDVTKLGTGI LTLNNDSAAYQGTTDIVGGEIAFGSDSAINMASQHINIHNSGVMSGNVTTAGDMNVMPGG ALRVAKTTIGGNLENGGTVQMNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDK MNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAK GKGNDEKNWYLTSKWDGVTPADTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFS HRLHDRLGEPQYTDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQ WSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYV DSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQ ITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWI NNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGML GVKYSW >gi|299856420|gb|ADWV01000031.1| GENE 31 34914 - 35180 270 88 aa, chain + ## HITS:1 COG:hipB KEGG:ns NR:ns ## COG: hipB COG1396 # Protein_GI_number: 16129467 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 88 1 88 88 137 97.0 4e-33 MMSFQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKI LQSLELSMTLCDTKNASPESTEQQDLEW >gi|299856420|gb|ADWV01000031.1| GENE 32 35180 - 36502 579 440 aa, chain + ## HITS:1 COG:hipA KEGG:ns NR:ns ## COG: hipA COG3550 # Protein_GI_number: 16129466 # Func_class: R General function prediction only # Function: Uncharacterized protein related to capsule biosynthesis enzymes # Organism: Escherichia coli K12 # 1 440 1 440 440 903 99.0 0 MPKLVTWMNNQRVGELTKLANGAHTFKYAPEWLASRYARPLSLSLPLQRGNITSDAVFNF FDNLLPDSPIVRDRIVKRYHAKSRQPFDLLSEIGRDSVGAVTLLPENETITRPIMAWEKL TEARLEEVLTAYKADIPLGMIREENDFRISVAGAQEKTALLRIGNDWCIPKGITPTTHII KLPIGEIRQPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAGNVRALAVERFDRRW NAERTVLLRLPQEDMCQTFGLPSSVKYESDGGPGIARIMAFLMGSSEALKDRYDFMKFQV FQWLIGATDGHAKNFSVFIQAGGSYRLTPFYDIISAFPVLGGTGIHISDLKLAMGLNASK GKKTAIDKIYPRHFLATAKVLRFPEVQMHEILSDFARMIPAALDNVKTSLPTDFPENVVT AVESNVLRLHGRLSREYGSK >gi|299856420|gb|ADWV01000031.1| GENE 33 37454 - 38017 310 187 aa, chain + ## HITS:1 COG:ECs2113 KEGG:ns NR:ns ## COG: ECs2113 COG3539 # Protein_GI_number: 15831367 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 285 100.0 3e-77 MKLKHVGMIVVSVLAMSSAAVSAAEGDESVTTTVNGGVIHFKGEVVNAACAIDSESMNQT VELGQVRSSRLAKAGDLSSAVGFNIKLNDCDTNVSSNAAVAFLGTTVTSNDDTLALQSSA AGSAQNVGIQILDRTGEVLILDGATFSAKTDLIDGTNILPFQARYIALGQSVAGTANADA TFKVQYL >gi|299856420|gb|ADWV01000031.1| GENE 34 38378 - 39088 425 236 aa, chain + ## HITS:1 COG:Z2201 KEGG:ns NR:ns ## COG: Z2201 COG3121 # Protein_GI_number: 15801632 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli O157:H7 EDL933 # 1 236 4 239 239 435 99.0 1e-122 MQTTRTPYSISFMATVLLLLLFACHSTVANAAVALGATRVIYPANQKQVLLPVTNNDPAS VYLIQSWIENAGDQKDTQFVITPPLFSMQGKKENTLRIINATNHQLPGDRESLFWVNVKA IPAMEKDQKNENTLQLAIISRIKMFYRPTNLAMAPEEAPAMLRFRRSGSKLTLINPTPYF ITVTNMKAGNSNLPNTMVPPKGEVSVDITHAATGDISFQTINDYGALTPRIKATMQ >gi|299856420|gb|ADWV01000031.1| GENE 35 39130 - 41781 949 883 aa, chain + ## HITS:1 COG:Z2203 KEGG:ns NR:ns ## COG: Z2203 COG3188 # Protein_GI_number: 15801633 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 EDL933 # 1 883 1 883 883 1664 98.0 0 MTAIRAAFKAYRMHQVLIMPRFARLTIALGLATAVFPVDAEYYFNPRFLSNDLAESVDLS AFTKGREAPPGTYRVDIYLNDEFMTSRDITFIADDNNAELIPCLSTDLLVSLGIKKSALL DNKEHSAEKHVPDNSACTPLQDRLADASTEFDVGQQHLSLSVPQIYVGRMARGYVSPDLW EEGINAGLLNYSFNGNSINNRSNHNAGKSNYAYLNLQSGINIGSWRLRDNSTWSYYSGSS NSSDSNKWQHINTSAERDIIPLRSRLTVGDSYTDGDIFDSVNFRGLKINSTEAMLPDSQH GFAPVIHGIARGTAQVSVKQNGYDVYQTTVPPGPFTIDDINSAANGGDLQVTIKEADGSI QTLYVPYSSVPVLQRAGYTRYALAMGEYRSGNNLQSSPKFIQGSLMHGLEGNWTPYGGMQ IAEDYQAFNLGIGKDLGLFGAFSFDITQANTTLADGTRHSGQSVKSVYSKSFYQTGTNIQ VAGYRYSTQGFYNLSDSAYSRMSGYTVKPPTGDTNEQTQFIDYFNLFYSKRGQEQISISQ QLGNYGTTFFSASRQSYWNTSRSDQQISFGLNVPFGDITTSLNYSYSNNIWQNDRDHLLA FTLNVPFSHWMRTDSQSAFRNSNASYSMSNDLKGGMTNLSGVYGTLLPDNNLNYSVQVGN THGGNTSSGTSGYSSLNYRGAYGNTNVGYSRNGDSSQIYYGMSGGIIAHADGITFGQPLG DTMVLVKAPGADNVKIENQTGIHTDWRGYAILPFATEYRENRVALNANSLADNVELDETV VTVIPTHGAIARATFNAQIGGKVLMTLKYGNKSVPFGAIVTHGENKNGSIVAENGQVYLT GLPQSGKLQVSWGNDKNSNCIVDYKLPEVSPETLLNQQTAICR >gi|299856420|gb|ADWV01000031.1| GENE 36 41795 - 42248 299 151 aa, chain + ## HITS:1 COG:ECs2109 KEGG:ns NR:ns ## COG: ECs2109 COG3539 # Protein_GI_number: 15831363 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 151 1 151 176 294 99.0 5e-80 MKYNNVIFLGLCLGLTTYSALSADSVIKISGRVLDYGCTVSSDSLNFTVDLQKNSARQFP TTGSTSPAVPFQITLSECSKGTTGVRVAFNGIEDAENNTLLKLDEGSNTASGLGIEILDG NMRPVKLNDLHAGMQWIPLVPEQNNILPYSA Prediction of potential genes in microbial genomes Time: Sun May 15 15:51:49 2011 Seq name: gi|299856419|gb|ADWV01000032.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont31.1, whole genome shotgun sequence Length of sequence - 36731 bp Number of predicted genes - 37, with homology - 37 Number of transcription units - 21, operones - 10 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 693 495 ## COG0583 Transcriptional regulator - Prom 757 - 816 5.6 + Prom 802 - 861 5.0 2 2 Tu 1 4/0.750 + CDS 923 - 1405 550 ## COG3194 Ureidoglycolate hydrolase + Prom 1426 - 1485 3.1 3 3 Tu 1 4/0.750 + CDS 1528 - 2298 756 ## COG1414 Transcriptional regulator + Term 2311 - 2341 3.0 + Prom 2308 - 2367 4.2 4 4 Op 1 8/0.125 + CDS 2388 - 4169 2173 ## COG3960 Glyoxylate carboligase 5 4 Op 2 8/0.125 + CDS 4182 - 4958 793 ## COG3622 Hydroxypyruvate isomerase + Term 4980 - 5026 2.6 6 5 Tu 1 . + CDS 5057 - 5935 1087 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases + Prom 6013 - 6072 9.8 7 6 Op 1 2/0.875 + CDS 6105 - 7559 1293 ## COG1953 Cytosine/uracil/thiamine/allantoin permeases 8 6 Op 2 2/0.875 + CDS 7619 - 8980 1580 ## COG0044 Dihydroorotase and related cyclic amidohydrolases + Term 8995 - 9027 3.0 9 7 Op 1 2/0.875 + CDS 9037 - 10338 1071 ## COG2233 Xanthine/uracil permeases 10 7 Op 2 . + CDS 10360 - 11505 1178 ## COG1929 Glycerate kinase + Term 11522 - 11555 3.1 - Term 11560 - 11591 4.1 11 8 Op 1 4/0.750 - CDS 11634 - 12419 984 ## COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization 12 8 Op 2 4/0.750 - CDS 12430 - 13665 1168 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 13 8 Op 3 . - CDS 13687 - 14736 977 ## COG2055 Malate/L-lactate dehydrogenases - Prom 14784 - 14843 5.9 + Prom 14816 - 14875 4.9 14 9 Op 1 . + CDS 15053 - 16720 1744 ## COG0074 Succinyl-CoA synthetase, alpha subunit 15 9 Op 2 . + CDS 16730 - 17989 1257 ## EcE24377A_0557 hypothetical protein 16 9 Op 3 . + CDS 18000 - 18815 477 ## ECSE_0545 hypothetical protein 17 9 Op 4 . + CDS 18812 - 19705 1014 ## COG0549 Carbamate kinase 18 10 Op 1 29/0.000 - CDS 19910 - 20977 1399 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 19 10 Op 2 5/0.125 - CDS 20974 - 21483 608 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase - Prom 21526 - 21585 3.4 20 11 Op 1 8/0.125 - CDS 21601 - 22323 634 ## COG2908 Uncharacterized protein conserved in bacteria 21 11 Op 2 . - CDS 22326 - 22820 601 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 22941 - 23000 4.3 + Prom 22900 - 22959 3.6 22 12 Tu 1 . + CDS 22994 - 24379 1795 ## COG0215 Cysteinyl-tRNA synthetase + Term 24391 - 24426 7.4 23 13 Tu 1 1/1.000 - CDS 24415 - 24936 307 ## COG1988 Predicted membrane-bound metal-dependent hydrolases - Term 25002 - 25035 6.1 24 14 Op 1 2/0.875 - CDS 25044 - 25256 318 ## COG2501 Uncharacterized conserved protein 25 14 Op 2 . - CDS 25258 - 26124 938 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase + Prom 26302 - 26361 7.4 26 15 Tu 1 7/0.125 + CDS 26605 - 27147 292 ## COG3539 P pilus assembly protein, pilin FimA + Term 27282 - 27330 0.1 + Prom 27274 - 27333 6.0 27 16 Op 1 10/0.000 + CDS 27367 - 28059 215 ## COG3121 P pilus assembly protein, chaperone PapD 28 16 Op 2 6/0.125 + CDS 28090 - 30699 1518 ## COG3188 P pilus assembly protein, porin PapC 29 16 Op 3 4/0.750 + CDS 30712 - 31719 712 ## COG3539 P pilus assembly protein, pilin FimA 30 16 Op 4 . + CDS 31730 - 32245 162 ## COG3539 P pilus assembly protein, pilin FimA 31 17 Tu 1 . - CDS 32248 - 32880 234 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + TRNA 33123 - 33199 89.4 # Arg TCT 0 0 32 18 Tu 1 . - CDS 33406 - 33750 141 ## ECIAI1_0759 putative prophage Kil protein (modular protein) - Term 34195 - 34224 -0.5 33 19 Tu 1 . - CDS 34346 - 35101 325 ## COG2932 Predicted transcriptional regulator + Prom 35060 - 35119 4.6 34 20 Op 1 . + CDS 35140 - 35370 135 ## ECUMN_0589 Cro 35 20 Op 2 . + CDS 35440 - 35979 536 ## EC55989_0768 regulatory protein CII (modular protein) from bacteriophage origin; putative coiled-coil 36 20 Op 3 . + CDS 35991 - 36446 142 ## EC55989_0769 replication protein O frm phage origin + Term 36593 - 36632 -0.7 37 21 Tu 1 . - CDS 36457 - 36723 242 ## COG1662 Transposase and inactivated derivatives, IS1 family Predicted protein(s) >gi|299856419|gb|ADWV01000032.1| GENE 1 3 - 693 495 230 aa, chain - ## HITS:1 COG:ECs0565 KEGG:ns NR:ns ## COG: ECs0565 COG0583 # Protein_GI_number: 15829819 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 230 1 230 308 451 99.0 1e-127 MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTA AGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLLYPPQAVAQLLAWLNERYP FTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLA NVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIA >gi|299856419|gb|ADWV01000032.1| GENE 2 923 - 1405 550 160 aa, chain + ## HITS:1 COG:ECs0566 KEGG:ns NR:ns ## COG: ECs0566 COG3194 # Protein_GI_number: 15829820 # Func_class: F Nucleotide transport and metabolism # Function: Ureidoglycolate hydrolase # Organism: Escherichia coli O157:H7 # 1 160 1 160 160 330 99.0 6e-91 MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDRTLISINRAQ PANLPLTIYELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHR NVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA >gi|299856419|gb|ADWV01000032.1| GENE 3 1528 - 2298 756 256 aa, chain + ## HITS:1 COG:ECs0567 KEGG:ns NR:ns ## COG: ECs0567 COG1414 # Protein_GI_number: 15829821 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 256 16 271 271 496 99.0 1e-140 MAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQ LGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLEC KSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKD LEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVR DTARDISTALGLKAHP >gi|299856419|gb|ADWV01000032.1| GENE 4 2388 - 4169 2173 593 aa, chain + ## HITS:1 COG:ECs0568 KEGG:ns NR:ns ## COG: ECs0568 COG3960 # Protein_GI_number: 15829822 # Func_class: R General function prediction only # Function: Glyoxylate carboligase # Organism: Escherichia coli O157:H7 # 1 593 1 593 593 1197 98.0 0 MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILARHVEGASHMAEG YTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITGQAPRARLHKEDFQAVDIE AIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLVDLPFDVQVAEIEFDPDMYEP LPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLMG WGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFANRHTGSVEKYTEGRKIVH IDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQEMQKAGRLPCRKEWVADCQQRKRTLL RKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGP LGWTIPAALGVCAADPERKVVAISGDFDFQFLIEELAVGAQFNIPYIHVLVNNAYLGLIR QSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKA LMNQYRVPVVVEIILERVTNISMGNELDNVMEFEDIADNAADAPTETCFMQYK >gi|299856419|gb|ADWV01000032.1| GENE 5 4182 - 4958 793 258 aa, chain + ## HITS:1 COG:STM0518 KEGG:ns NR:ns ## COG: STM0518 COG3622 # Protein_GI_number: 16763898 # Func_class: G Carbohydrate transport and metabolism # Function: Hydroxypyruvate isomerase # Organism: Salmonella typhimurium LT2 # 1 258 1 258 258 490 88.0 1e-138 MLRFSANLSMLFQEYDFLERFDKAAQCGFRAVEFMFPYDYDIEVLQHKLSSNNLEHTLHN LPAGDWAAGERGIACIPGREEEFRDGVAVAIRYARALGNKKINCLVGKTPVGVSAEQVHT TLVENLRYAANMLAKEGILLLIEPLNHFDMPGFHLTGTQQALALIADIGSNNIKIQYDIY HMQRMEGELAQTMTTWANKIGHLQIADNPRRGEPGTGEINYDFLFDLIEKSDYDGWVGCE YKPLTTTEAGLSWINPYR >gi|299856419|gb|ADWV01000032.1| GENE 6 5057 - 5935 1087 292 aa, chain + ## HITS:1 COG:ybbQ KEGG:ns NR:ns ## COG: ybbQ COG2084 # Protein_GI_number: 16128493 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Escherichia coli K12 # 1 292 1 292 292 541 97.0 1e-154 MKLGFIGLGIMGTPMAVNLARAGHQLHVTTIGPVAEELLALGAVNVETARQVTESSDIIF IMVPDTPQVEEVLFGENGCAKTSLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVS GGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNI EAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLN LALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSALVQALELMANHKLA >gi|299856419|gb|ADWV01000032.1| GENE 7 6105 - 7559 1293 484 aa, chain + ## HITS:1 COG:ECs0572 KEGG:ns NR:ns ## COG: ECs0572 COG1953 # Protein_GI_number: 15829826 # Func_class: F Nucleotide transport and metabolism; H Coenzyme transport and metabolism # Function: Cytosine/uracil/thiamine/allantoin permeases # Organism: Escherichia coli O157:H7 # 1 463 1 463 463 813 99.0 0 MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTF SIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWF GLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLITFLLFWLVNVGIGFGGGKVL NKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPSGIQKAENSGFLFLVVINAVVAVW AAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDI VQRWDSLFASFFAVLVILMTTISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLL ICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTAPGDYKYYDN GFNLTAFSVTLVAVILSLGGKFIPFMEPLSRVSWFVGVIVAFAAYALLKKRTTAEKTGEQ KTIG >gi|299856419|gb|ADWV01000032.1| GENE 8 7619 - 8980 1580 453 aa, chain + ## HITS:1 COG:ybbX KEGG:ns NR:ns ## COG: ybbX COG0044 # Protein_GI_number: 16128496 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Escherichia coli K12 # 1 453 1 453 453 941 99.0 0 MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHT HISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDA AQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELG QPVLVHCENALICDALGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHV CHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGM WEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMF GKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGA RITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ >gi|299856419|gb|ADWV01000032.1| GENE 9 9037 - 10338 1071 433 aa, chain + ## HITS:1 COG:ECs0575 KEGG:ns NR:ns ## COG: ECs0575 COG2233 # Protein_GI_number: 15829829 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Escherichia coli O157:H7 # 1 433 3 435 435 747 99.0 0 MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFA QAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFS GLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVM CLVLGMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPG IILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFS PFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLL FSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLA VLMDNLIPWERIE >gi|299856419|gb|ADWV01000032.1| GENE 10 10360 - 11505 1178 381 aa, chain + ## HITS:1 COG:ECs0576 KEGG:ns NR:ns ## COG: ECs0576 COG1929 # Protein_GI_number: 15829830 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Escherichia coli O157:H7 # 1 381 1 381 381 647 98.0 0 MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNI VTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRH ALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLVANGGNLARVASIEMDECD PRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEIN VCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTA GGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGET NLFNSARNIACAIKIGQGIKN >gi|299856419|gb|ADWV01000032.1| GENE 11 11634 - 12419 984 261 aa, chain - ## HITS:1 COG:ECs0577 KEGG:ns NR:ns ## COG: ECs0577 COG3257 # Protein_GI_number: 15829831 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in glyoxylate utilization # Organism: Escherichia coli O157:H7 # 1 261 1 261 261 498 98.0 1e-141 MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFV DYLVTLHQNGSNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFV NAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMN MHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYG VGRGEAFSYIYSKDCNRDVEI >gi|299856419|gb|ADWV01000032.1| GENE 12 12430 - 13665 1168 411 aa, chain - ## HITS:1 COG:ylbB KEGG:ns NR:ns ## COG: ylbB COG0624 # Protein_GI_number: 16128500 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli K12 # 1 411 1 411 411 870 99.0 0 MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVG NLYGRLSGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEV VAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPR QDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVY AFSRICHQSIEKAKKMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQ QLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCESEKLNYRVMHSGAGHDA QIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK >gi|299856419|gb|ADWV01000032.1| GENE 13 13687 - 14736 977 349 aa, chain - ## HITS:1 COG:ylbC KEGG:ns NR:ns ## COG: ylbC COG2055 # Protein_GI_number: 16128501 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 1 349 1 349 349 704 99.0 0 MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGG TNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAI SYFVQQAARAGLIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQ AWGKVLDARSRNMSIPDTWAVDKNGAPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLL GLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFN QVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ >gi|299856419|gb|ADWV01000032.1| GENE 14 15053 - 16720 1744 555 aa, chain + ## HITS:1 COG:ECs0580 KEGG:ns NR:ns ## COG: ECs0580 COG0074 # Protein_GI_number: 15829834 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Escherichia coli O157:H7 # 1 555 1 555 555 1016 98.0 0 MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNAT PNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQSLTQVRRWDSACQKLSDANL ALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMI AATPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISA LTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVW FASSLDEAARLACLLSRVTARRNAITPASSGFICGLYTGGTLAAEAAGLLAGHLGVEADD THHHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPALRNQLIADLGAKPQVRVLLLDVVIG FGATADPAASLVSAWQKACAARSDSQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVS SLPEATLLAAALIHPLSSATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPV AGGNKKLARLLERLQ >gi|299856419|gb|ADWV01000032.1| GENE 15 16730 - 17989 1257 419 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_0557 NR:ns ## KEGG: EcE24377A_0557 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 419 1 419 419 814 99.0 0 MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNQGKTLLHAGPPMRWQEMTGPMKG ACVGACLFEGWAKDEAQALAMLEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDG NRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMEHGIDLTAMMAQGI TMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAA MDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMG DSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQG ACLGLDIRHVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG >gi|299856419|gb|ADWV01000032.1| GENE 16 18000 - 18815 477 271 aa, chain + ## HITS:1 COG:no KEGG:ECSE_0545 NR:ns ## KEGG: ECSE_0545 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 271 1 271 271 531 100.0 1e-150 MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQ FDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETG LFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAA WYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAV AIDSLLALGHTSGADTLLGFWLGQQLLQGKP >gi|299856419|gb|ADWV01000032.1| GENE 17 18812 - 19705 1014 297 aa, chain + ## HITS:1 COG:arcC KEGG:ns NR:ns ## COG: arcC COG0549 # Protein_GI_number: 16128505 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli K12 # 1 297 1 297 297 550 98.0 1e-156 MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLAL QNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQP EKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVI CSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIR HATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGICISL >gi|299856419|gb|ADWV01000032.1| GENE 18 19910 - 20977 1399 355 aa, chain - ## HITS:1 COG:purK KEGG:ns NR:ns ## COG: purK COG0026 # Protein_GI_number: 16128506 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Escherichia coli K12 # 1 355 1 355 355 692 98.0 0 MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQNVITAEIERWPETALTR ELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLADRSEWPAVFERLGELAIVK RRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLT HNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELA PRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNSPSVMINLIGSDVNYDWLKLPLV HLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG >gi|299856419|gb|ADWV01000032.1| GENE 19 20974 - 21483 608 169 aa, chain - ## HITS:1 COG:ECs0585 KEGG:ns NR:ns ## COG: ECs0585 COG0041 # Protein_GI_number: 15829839 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Escherichia coli O157:H7 # 1 169 1 169 169 280 100.0 1e-75 MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEE NGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLA IGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA >gi|299856419|gb|ADWV01000032.1| GENE 20 21601 - 22323 634 240 aa, chain - ## HITS:1 COG:ECs0586 KEGG:ns NR:ns ## COG: ECs0586 COG2908 # Protein_GI_number: 15829840 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 240 1 240 240 491 99.0 1e-139 MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMA AAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCT DDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVV SAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF >gi|299856419|gb|ADWV01000032.1| GENE 21 22326 - 22820 601 164 aa, chain - ## HITS:1 COG:ppiB KEGG:ns NR:ns ## COG: ppiB COG0652 # Protein_GI_number: 16128509 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Escherichia coli K12 # 1 164 1 164 164 328 100.0 2e-90 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMK QKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGY CVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE >gi|299856419|gb|ADWV01000032.1| GENE 22 22994 - 24379 1795 461 aa, chain + ## HITS:1 COG:cysS KEGG:ns NR:ns ## COG: cysS COG0215 # Protein_GI_number: 16128510 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 461 1 461 461 919 99.0 0 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK LKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAE IIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMD FVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIA QSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRS QLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLF DMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALI QQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK >gi|299856419|gb|ADWV01000032.1| GENE 23 24415 - 24936 307 173 aa, chain - ## HITS:1 COG:ybcI KEGG:ns NR:ns ## COG: ybcI COG1988 # Protein_GI_number: 16128511 # Func_class: R General function prediction only # Function: Predicted membrane-bound metal-dependent hydrolases # Organism: Escherichia coli K12 # 1 173 1 173 173 287 98.0 5e-78 MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGF THSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWS DERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMVLMGMLWWRRR >gi|299856419|gb|ADWV01000032.1| GENE 24 25044 - 25256 318 70 aa, chain - ## HITS:1 COG:ybcJ KEGG:ns NR:ns ## COG: ybcJ COG2501 # Protein_GI_number: 16128512 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 70 8 77 77 127 100.0 7e-30 MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVS FAGHSVQVVA >gi|299856419|gb|ADWV01000032.1| GENE 25 25258 - 26124 938 288 aa, chain - ## HITS:1 COG:folD KEGG:ns NR:ns ## COG: folD COG0190 # Protein_GI_number: 16128513 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Escherichia coli K12 # 1 288 1 288 288 570 100.0 1e-162 MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEE VGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDV DGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELL LAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKV VGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE >gi|299856419|gb|ADWV01000032.1| GENE 26 26605 - 27147 292 180 aa, chain + ## HITS:1 COG:ECs0592 KEGG:ns NR:ns ## COG: ECs0592 COG3539 # Protein_GI_number: 15829846 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli O157:H7 # 1 180 12 191 191 264 100.0 8e-71 MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTD IFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVG IEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE >gi|299856419|gb|ADWV01000032.1| GENE 27 27367 - 28059 215 230 aa, chain + ## HITS:1 COG:sfmC KEGG:ns NR:ns ## COG: sfmC COG3121 # Protein_GI_number: 16128515 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Escherichia coli K12 # 1 230 1 230 230 435 99.0 1e-122 MMTKIKLLMLIIFYLIISASTHAAGGIALGATRIIYPADAQQTAVWIRNSHTNERFLVNS WIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKN ALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNL QVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN >gi|299856419|gb|ADWV01000032.1| GENE 28 28090 - 30699 1518 869 aa, chain + ## HITS:1 COG:ECs0594 KEGG:ns NR:ns ## COG: ECs0594 COG3188 # Protein_GI_number: 15829848 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Escherichia coli O157:H7 # 1 869 1 869 869 1720 99.0 0 MKIPTTTDIPQRYSWCLAGICYSSLAILPSFLSYAESYFNPAFLLENGTSVADLSRFERG NHQPARVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMPCFNQVLLERIGLNSSAFP ELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQITLLSSAHGYIPPEEWDEGIPAL LLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSWNYFRGNGYHSEQWNNIGTWVQR AIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDNMYPDSQQGFAPTVRGIARTAAQLT IRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDERDGNQQNYTIPYSTVPILQREG RFKFDLTAGDFRSGNSQQSSPFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLGRNLG NWGAVSLDVTHARSQLADDSRHEGDSIRFLYAKSMNTFGTNFQLMGYRYSTQGFYTLDDV AYRRMEGYEYDYDYDGEHRDELIIVNYHNLRFSRKDRLQLNISQSLNDFGSLYISGTHQK YWNTSDSDTWYQVGYTSSWVGISYSLSFSWNESVGIPDNERIVGLNVSVPFNVLTKRRYT RENALDRAYASFNANRNSNGQNSWLAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANW QAAYGTLGVGYNYDRDQHDVNWQLSGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIEN QTGILTDWRGYAVMPYATVYRYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTR IGVRALITVTQGGKPVPFGSLVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANS RCIAHYVLPKQSLQQAVTVISAVCTHPGS >gi|299856419|gb|ADWV01000032.1| GENE 29 30712 - 31719 712 335 aa, chain + ## HITS:1 COG:sfmH KEGG:ns NR:ns ## COG: sfmH COG3539 # Protein_GI_number: 16128517 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 11 335 1 325 325 640 99.0 0 MKIICRLLLAMACLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKS GWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLNDYLLGAMSLVDSVMDIQFP PQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPL VTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAV KCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAA AAANVTLRARPISITGQKPTEGPFSALGYLRVDYQ >gi|299856419|gb|ADWV01000032.1| GENE 30 31730 - 32245 162 171 aa, chain + ## HITS:1 COG:sfmF KEGG:ns NR:ns ## COG: sfmF COG3539 # Protein_GI_number: 16128518 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 171 1 171 171 322 97.0 3e-88 MRRALFSCFCGLLWISSGWAADPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQ LLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTIAIELRNSDR SRLALGAASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN >gi|299856419|gb|ADWV01000032.1| GENE 31 32248 - 32880 234 210 aa, chain - ## HITS:1 COG:ZfimZ KEGG:ns NR:ns ## COG: ZfimZ COG2197 # Protein_GI_number: 15800272 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Escherichia coli O157:H7 EDL933 # 1 210 22 231 231 394 100.0 1e-110 MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPVDLIIMDIDLP GTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKCNDQNDIFHAVQMI LSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGLSNKEIADKLLLSNKT VSAHKSNIYGKLGLHSIVELIDYAKLYELI >gi|299856419|gb|ADWV01000032.1| GENE 32 33406 - 33750 141 114 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_0759 NR:ns ## KEGG: ECIAI1_0759 # Name: not_defined # Def: putative prophage Kil protein (modular protein) # Organism: E.coli_IAI1 # Pathway: not_defined # 1 66 69 134 136 127 96.0 1e-28 MVHQHYGTQTVNRGAVMPGMLVKHKDGTWTASANLRGRLYLHRGIERTYTRDLLVEVFLD GRGTPLRSEAGYFPAFLLSERCASTARHHGYQLVVVQELKISVSMTSDTPGQAG >gi|299856419|gb|ADWV01000032.1| GENE 33 34346 - 35101 325 251 aa, chain - ## HITS:1 COG:STM0898 KEGG:ns NR:ns ## COG: STM0898 COG2932 # Protein_GI_number: 16764259 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Salmonella typhimurium LT2 # 23 251 1 231 231 160 40.0 2e-39 MVVFSQQPFSFDGIKPWLYIWTMKTTLSERLKEARLARGLTQKALGDLVGVSQAAIQKIE TGKANQTTKIVEIANALGVRAEWLSSGVGNMSDSTVQPIQSTVSHSKYFKIDVLDIEVSA GPGVINREFVEVLRSVEYSFDDARHMFDGRKAENIRIINVRGDSMSGTIEPGDLLFVDIT VKSFDGDGIYAFLYDDTAHVKRLQMMKDKLLVISDNKSYSPWDPIEKDEMNRVFIFGKVI GSMPQTYRKHG >gi|299856419|gb|ADWV01000032.1| GENE 34 35140 - 35370 135 76 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_0589 NR:ns ## KEGG: ECUMN_0589 # Name: cro # Def: Cro # Organism: E.coli_UMN026 # Pathway: not_defined # 1 76 1 76 76 137 100.0 1e-31 MNPAIKTAINIVGSQKKLGAACEVSQQAVYKWLHNKAKVSPEHVGSIVTATGGVVKAYQI RPDLPKLFPHTEKNAA >gi|299856419|gb|ADWV01000032.1| GENE 35 35440 - 35979 536 179 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0768 NR:ns ## KEGG: EC55989_0768 # Name: not_defined # Def: regulatory protein CII (modular protein) from bacteriophage origin; putative coiled-coil # Organism: E.coli_55989 # Pathway: not_defined # 1 179 1 179 179 346 100.0 2e-94 MQPLTYQQTSGFSPTAVINRSQTKQVPGHEKIRDAVRAWSAVDNQDVVATLIVNEYREQG GGTIDFPDDVSRARQKLFRFLDNKFDSEKYRNNVRELTPAILAVLPLEYRGYLVEQDSFM ARLAEMEKELSEAKQAVILNAPRHQKLKEISEGIVSMFRVDPDLAGPLMAMVTTMLGAI >gi|299856419|gb|ADWV01000032.1| GENE 36 35991 - 36446 142 151 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0769 NR:ns ## KEGG: EC55989_0769 # Name: not_defined # Def: replication protein O frm phage origin # Organism: E.coli_55989 # Pathway: not_defined # 1 151 6 156 339 297 98.0 8e-80 MAKAGLLEQNRLSGANRNTLIAGGIMANTAEIFNFPVPDAAQKEPRVADLDDGYTRIANE LLEAVMLAGLTQHQLLVFLAVMRKTYGFNKKLDWVSNEQLSELTGILPHKCSAAKSVLVK RGIFIQSGRNTGINNVVSEWSTLPESGKKNR >gi|299856419|gb|ADWV01000032.1| GENE 37 36457 - 36723 242 88 aa, chain - ## HITS:1 COG:insB_g3 KEGG:ns NR:ns ## COG: insB_g3 COG1662 # Protein_GI_number: 16128015 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS1 family # Organism: Escherichia coli K12 # 1 88 80 167 167 171 100.0 3e-43 MATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARL GRKSLSFSKSVELHDKVIGHYLNIKHYQ Prediction of potential genes in microbial genomes Time: Sun May 15 15:52:20 2011 Seq name: gi|299856418|gb|ADWV01000033.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont32.1, whole genome shotgun sequence Length of sequence - 36374 bp Number of predicted genes - 35, with homology - 34 Number of transcription units - 24, operones - 6 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 13 - 822 809 ## COG2414 Aldehyde:ferredoxin oxidoreductase 2 1 Op 2 . + CDS 835 - 1473 481 ## EcE24377A_1887 hypothetical protein 3 1 Op 3 3/0.750 + CDS 1537 - 2205 230 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 4 1 Op 4 . + CDS 2202 - 2987 613 ## COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) 5 1 Op 5 . + CDS 2991 - 3803 323 ## ECIAI1_1720 hypothetical protein - Term 3768 - 3802 -0.5 6 2 Tu 1 . - CDS 3815 - 5419 1073 ## COG4529 Uncharacterized protein conserved in bacteria - Prom 5480 - 5539 3.3 - Term 5504 - 5530 -0.7 7 3 Tu 1 . - CDS 5545 - 5850 313 ## SSON_1489 hypothetical protein - TRNA 5958 - 6034 96.8 # Val GAC 0 0 - TRNA 6039 - 6115 92.3 # Val GAC 0 0 + Prom 6327 - 6386 3.3 8 4 Tu 1 . + CDS 6423 - 7679 912 ## COG3468 Type V secretory pathway, adhesin AidA + Term 7683 - 7725 7.5 - Term 7671 - 7713 8.3 9 5 Tu 1 . - CDS 7720 - 9093 1509 ## COG0534 Na+-driven multidrug efflux pump - Prom 9174 - 9233 5.7 + Prom 9035 - 9094 3.6 10 6 Tu 1 . + CDS 9308 - 9949 705 ## COG0307 Riboflavin synthase alpha chain + Term 9985 - 10020 0.4 - Term 9945 - 9977 4.6 11 7 Tu 1 . - CDS 9989 - 11137 935 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases - Prom 11365 - 11424 7.3 - Term 11196 - 11228 1.0 12 8 Tu 1 . - CDS 11428 - 12639 1207 ## COG0477 Permeases of the major facilitator superfamily - Prom 12671 - 12730 2.9 + Prom 12664 - 12723 4.4 13 9 Tu 1 . + CDS 12752 - 13684 672 ## COG0583 Transcriptional regulator + Term 13765 - 13817 2.1 - Term 13628 - 13674 0.5 14 10 Tu 1 . - CDS 13681 - 14706 999 ## COG1609 Transcriptional regulators - Prom 14863 - 14922 4.0 + Prom 14916 - 14975 5.6 15 11 Tu 1 . + CDS 15005 - 15094 102 ## + Term 15145 - 15194 2.4 + Prom 15155 - 15214 3.4 16 12 Tu 1 . + CDS 15260 - 16429 1221 ## COG2814 Arabinose efflux permease - Term 16429 - 16462 5.4 17 13 Tu 1 . - CDS 16575 - 17156 462 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent - Prom 17209 - 17268 4.4 - Term 17239 - 17280 8.1 18 14 Tu 1 . - CDS 17284 - 18099 540 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - Prom 18153 - 18212 7.1 + Prom 18341 - 18400 4.7 19 15 Tu 1 . + CDS 18434 - 18781 540 ## COG0278 Glutaredoxin-related protein + Term 18796 - 18836 8.5 - Term 18771 - 18812 -0.8 20 16 Op 1 3/0.750 - CDS 18832 - 23448 3649 ## COG1201 Lhr-like helicases 21 16 Op 2 7/0.083 - CDS 23541 - 24188 704 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 24216 - 24275 3.9 - Term 24247 - 24282 5.2 22 17 Op 1 4/0.583 - CDS 24291 - 24698 216 ## PROTEIN SUPPORTED gi|15900839|ref|NP_345443.1| lactoylglutathione lyase 23 17 Op 2 6/0.250 - CDS 24779 - 25876 1239 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 24 17 Op 3 . - CDS 25913 - 26512 509 ## COG1309 Transcriptional regulator - Prom 26723 - 26782 2.2 + Prom 26821 - 26880 4.1 25 18 Op 1 3/0.750 + CDS 26903 - 27799 1008 ## COG4989 Predicted oxidoreductase 26 18 Op 2 . + CDS 27865 - 28401 711 ## COG2032 Cu/Zn superoxide dismutase + Term 28474 - 28509 2.4 - Term 28227 - 28264 2.2 27 19 Op 1 6/0.250 - CDS 28402 - 30414 1280 ## COG1289 Predicted membrane protein 28 19 Op 2 . - CDS 30414 - 31271 559 ## COG1566 Multidrug resistance efflux pump 29 19 Op 3 . - CDS 31274 - 31510 126 ## ECUMN_1934 conserved hypothetical protein; putative inner membrane protein - Prom 31654 - 31713 9.9 + Prom 31498 - 31557 6.8 30 20 Tu 1 . + CDS 31705 - 32145 328 ## COG1846 Transcriptional regulators + Term 32155 - 32199 4.3 - Term 32140 - 32183 5.5 31 21 Tu 1 . - CDS 32192 - 32659 571 ## COG3133 Outer membrane lipoprotein - Prom 32758 - 32817 6.9 + Prom 32804 - 32863 3.2 32 22 Tu 1 . + CDS 32933 - 34042 884 ## COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 33 23 Op 1 3/0.750 + CDS 34146 - 34469 250 ## COG3895 Predicted periplasmic protein 34 23 Op 2 5/0.333 + CDS 34528 - 35184 670 ## COG0259 Pyridoxamine-phosphate oxidase + Prom 35189 - 35248 3.2 35 24 Tu 1 . + CDS 35313 - 36374 811 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 Predicted protein(s) >gi|299856418|gb|ADWV01000033.1| GENE 1 13 - 822 809 269 aa, chain + ## HITS:1 COG:ydhV KEGG:ns NR:ns ## COG: ydhV COG2414 # Protein_GI_number: 16129629 # Func_class: C Energy production and conversion # Function: Aldehyde:ferredoxin oxidoreductase # Organism: Escherichia coli K12 # 1 268 432 699 700 583 99.0 1e-166 MGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNR DCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCL HNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRA YTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQ LGCPTRETLQRLGLEDIAADLAAHNLLPV >gi|299856418|gb|ADWV01000033.1| GENE 2 835 - 1473 481 212 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_1887 NR:ns ## KEGG: EcE24377A_1887 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 212 4 215 215 374 100.0 1e-102 MNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAV FLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQ DICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESS TAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP >gi|299856418|gb|ADWV01000033.1| GENE 3 1537 - 2205 230 222 aa, chain + ## HITS:1 COG:ECs2378 KEGG:ns NR:ns ## COG: ECs2378 COG0437 # Protein_GI_number: 15831632 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 222 18 239 239 457 99.0 1e-129 MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTN HVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVE KSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGR EDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV >gi|299856418|gb|ADWV01000033.1| GENE 4 2202 - 2987 613 261 aa, chain + ## HITS:1 COG:ydhU KEGG:ns NR:ns ## COG: ydhU COG4117 # Protein_GI_number: 16129626 # Func_class: C Energy production and conversion # Function: Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) # Organism: Escherichia coli K12 # 1 261 1 261 261 477 98.0 1e-134 MNSSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSAT DHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLA CWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPTTTQSKFNPLQ QVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYL CTTGRTPHETFKSMVDGYHRH >gi|299856418|gb|ADWV01000033.1| GENE 5 2991 - 3803 323 270 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_1720 NR:ns ## KEGG: ECIAI1_1720 # Name: ydhT # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 270 1 270 270 521 100.0 1e-146 MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLA DENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGY SVRIGSVGFNSHIGSSGERALVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVAS NGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALAYHDGER VRFAVAIEGENNIRTGVRYRLNEQHQFVEC >gi|299856418|gb|ADWV01000033.1| GENE 6 3815 - 5419 1073 534 aa, chain - ## HITS:1 COG:ydhS KEGG:ns NR:ns ## COG: ydhS COG4529 # Protein_GI_number: 16129624 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 534 1 534 534 1078 99.0 0 MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASI EIPPINCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQ KFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSP WSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFNRDNASEKLNITL MSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWS QRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAV QEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEI NESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQ PEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD >gi|299856418|gb|ADWV01000033.1| GENE 7 5545 - 5850 313 101 aa, chain - ## HITS:1 COG:no KEGG:SSON_1489 NR:ns ## KEGG: SSON_1489 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 101 1 101 101 191 100.0 8e-48 MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEK SALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA >gi|299856418|gb|ADWV01000033.1| GENE 8 6423 - 7679 912 418 aa, chain + ## HITS:1 COG:ydhQ KEGG:ns NR:ns ## COG: ydhQ COG3468 # Protein_GI_number: 16129622 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 1 418 1 418 418 695 99.0 0 MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIA KCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLE NGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVF MLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRA EVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADL QQSTITVQQGGVLILDGSTVKGDGVTFIVGNINLNGGKLWLITGAATHVQLKVKRLRGEG AICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA >gi|299856418|gb|ADWV01000033.1| GENE 9 7720 - 9093 1509 457 aa, chain - ## HITS:1 COG:ECs2372 KEGG:ns NR:ns ## COG: ECs2372 COG0534 # Protein_GI_number: 15831626 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli O157:H7 # 1 457 1 457 457 798 99.0 0 MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILF GHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENID PALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIY GHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQ LGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVG YRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLL AAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAG FWIGFIIGLTSAAIMMMLRMRFLQRLPSVIILQRASR >gi|299856418|gb|ADWV01000033.1| GENE 10 9308 - 9949 705 213 aa, chain + ## HITS:1 COG:ribC KEGG:ns NR:ns ## COG: ribC COG0307 # Protein_GI_number: 16129620 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Escherichia coli K12 # 1 213 1 213 213 426 100.0 1e-119 MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVS FDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQ IWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARV NIEIDPQTQAVVDTVERVLAARENAMNQPGTEA >gi|299856418|gb|ADWV01000033.1| GENE 11 9989 - 11137 935 382 aa, chain - ## HITS:1 COG:cfa KEGG:ns NR:ns ## COG: cfa COG2230 # Protein_GI_number: 16129619 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Escherichia coli K12 # 1 382 1 382 382 809 99.0 0 MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGE SYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIASARLFNLQSKKRAWIVGKEHY DLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGG LAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEH VGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQS SEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRA RDIQLWQVVFSRGVENGLRVAR >gi|299856418|gb|ADWV01000033.1| GENE 12 11428 - 12639 1207 403 aa, chain - ## HITS:1 COG:ECs2369 KEGG:ns NR:ns ## COG: ECs2369 COG0477 # Protein_GI_number: 15831623 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 403 1 403 403 706 99.0 0 MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLL WGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVT DYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWL KPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVI GLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEIL IPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTP LLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH >gi|299856418|gb|ADWV01000033.1| GENE 13 12752 - 13684 672 310 aa, chain + ## HITS:1 COG:ECs2368 KEGG:ns NR:ns ## COG: ECs2368 COG0583 # Protein_GI_number: 15831622 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 310 1 310 310 622 100.0 1e-178 MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTA AGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDD VELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLAL MDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMV PTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLR EPEETPATGD >gi|299856418|gb|ADWV01000033.1| GENE 14 13681 - 14706 999 341 aa, chain - ## HITS:1 COG:ECs2367 KEGG:ns NR:ns ## COG: ECs2367 COG1609 # Protein_GI_number: 15831621 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 700 100.0 0 MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTK SIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLL VMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHRE IGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRP TAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGET AFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR >gi|299856418|gb|ADWV01000033.1| GENE 15 15005 - 15094 102 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTDLKFSLVTTIIVLGLIVAVGLTAALH >gi|299856418|gb|ADWV01000033.1| GENE 16 15260 - 16429 1221 389 aa, chain + ## HITS:1 COG:ydhP KEGG:ns NR:ns ## COG: ydhP COG2814 # Protein_GI_number: 16129615 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 389 1 389 389 571 100.0 1e-163 MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLM TLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAAS VVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSL PKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVT AMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVW GAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPV MGAIVAGLALLLVFMSARKQPETVCVANS >gi|299856418|gb|ADWV01000033.1| GENE 17 16575 - 17156 462 193 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 193 1 199 201 182 44 3e-45 MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS EGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFG SGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWA LVNWEFVAKNLAA >gi|299856418|gb|ADWV01000033.1| GENE 18 17284 - 18099 540 271 aa, chain - ## HITS:1 COG:ydhO KEGG:ns NR:ns ## COG: ydhO COG0791 # Protein_GI_number: 16129613 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Escherichia coli K12 # 1 271 1 271 271 422 100.0 1e-118 MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKADKKKSTATTKKTQKTA KKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASASFTEKCTKRKGYKSHCVK VKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGGSSPRTGFDCSGLVYYAYKDL VKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRT GQEIQITSLSEDYWQRHYVGARRVMTPKTLR >gi|299856418|gb|ADWV01000033.1| GENE 19 18434 - 18781 540 115 aa, chain + ## HITS:1 COG:ECs2363 KEGG:ns NR:ns ## COG: ECs2363 COG0278 # Protein_GI_number: 15831617 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin-related protein # Organism: Escherichia coli O157:H7 # 1 115 1 115 115 225 100.0 1e-59 MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQNPDIRA ELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKETAAKYKSEEPDAE >gi|299856418|gb|ADWV01000033.1| GENE 20 18832 - 23448 3649 1538 aa, chain - ## HITS:1 COG:lhr KEGG:ns NR:ns ## COG: lhr COG1201 # Protein_GI_number: 16129611 # Func_class: R General function prediction only # Function: Lhr-like helicases # Organism: Escherichia coli K12 # 1 1538 1 1538 1538 2909 99.0 0 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQSQTWHVAARSEHALVIAPTGSGKTLA AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQLPLKGIADERRRRG ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA MRHPQIRIVVPVANMDDVSSVASSTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMEALQVD EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN TNANIQGLIDEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWALAITGR IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQE ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPLVSYNTPN LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG >gi|299856418|gb|ADWV01000033.1| GENE 21 23541 - 24188 704 215 aa, chain - ## HITS:1 COG:ECs2361 KEGG:ns NR:ns ## COG: ECs2361 COG0847 # Protein_GI_number: 15831615 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Escherichia coli O157:H7 # 1 215 1 215 215 441 100.0 1e-124 MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHF HVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKVVRKGIKASGCNRAIMVAH NANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALGQTVLSKACQTAGMDFDSTQA HSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV >gi|299856418|gb|ADWV01000033.1| GENE 22 24291 - 24698 216 135 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900839|ref|NP_345443.1| lactoylglutathione lyase [Streptococcus pneumoniae TIGR4] # 2 127 4 126 126 87 38 8e-17 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN WGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYK IELIEEKDAGRGLGN >gi|299856418|gb|ADWV01000033.1| GENE 23 24779 - 25876 1239 365 aa, chain - ## HITS:1 COG:nemA KEGG:ns NR:ns ## COG: nemA COG1902 # Protein_GI_number: 16129608 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Escherichia coli K12 # 1 365 1 365 365 702 99.0 0 MSSEKLYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRASAGLIISEAT QISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQLWHTGRISHASLQPGGQAP VAPSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGIVNDFRQAIANAREAGFDLVE LHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLEVVDAGIEEWGADRIGIRISPIGT FQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEPDWAGGEPYTDAFREKVRARFHGPIIG AGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAESFYGGGAEGYT DYPTL >gi|299856418|gb|ADWV01000033.1| GENE 24 25913 - 26512 509 199 aa, chain - ## HITS:1 COG:ydhM KEGG:ns NR:ns ## COG: ydhM COG1309 # Protein_GI_number: 16129607 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 199 1 199 199 390 99.0 1e-109 MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGSFYHYFRSKEAFGVAML ERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGTISGCLTVKLSAEVCDLSE DMRSAMDKGARGVIDLLSQALENGRENHCLTFCGEPLQQAQVLYALWLGANLQAKISRSF EPLENALAHVKNIIATPAV >gi|299856418|gb|ADWV01000033.1| GENE 25 26903 - 27799 1008 298 aa, chain + ## HITS:1 COG:ydhF KEGG:ns NR:ns ## COG: ydhF COG4989 # Protein_GI_number: 16129605 # Func_class: R General function prediction only # Function: Predicted oxidoreductase # Organism: Escherichia coli K12 # 1 298 1 298 298 606 99.0 1e-173 MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQC EAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATD HLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQ VEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDYFQQLRDELAVVAEELNAG SIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGYDVP >gi|299856418|gb|ADWV01000033.1| GENE 26 27865 - 28401 711 178 aa, chain + ## HITS:1 COG:ECs2355 KEGG:ns NR:ns ## COG: ECs2355 COG2032 # Protein_GI_number: 15831609 # Func_class: P Inorganic ion transport and metabolism # Function: Cu/Zn superoxide dismutase # Organism: Escherichia coli O157:H7 # 6 178 1 173 173 301 100.0 3e-82 MNGGPMKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTITETDKGLEFSPD LKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPA LVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPLGGGGERYACGVIK >gi|299856418|gb|ADWV01000033.1| GENE 27 28402 - 30414 1280 670 aa, chain - ## HITS:1 COG:ydhK KEGG:ns NR:ns ## COG: ydhK COG1289 # Protein_GI_number: 16129603 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 1 670 1 670 670 1207 98.0 0 MNASSWSLRNLPWFKATLAQWRYALRNTIAMCLALTVAYYLNLDEPYWAMTSAAVVSFPT VGGVISKSLGGIAGSLLGAIAALLLAGHTLNEPWFFLLSMSAWLGFCTWACAHFTNNVAY AFQLAGYTAAIIAFPMVNITEASQLWDIAQARVCEVIVGILCGGMMMMILPSSSDATALL TALKNMHARLLEHASLLWQPETNDAIRAAHEGVIGQILTMNLLRIQAFWSHYRFRQQNAR LNALLHQQLRMTSVISSLRRMLLNWPSPPGATREILEQLLTALASSQTDAYTVARIIAPL RPTNVADYRHVAFWQRLRYFCRLYLQSSQELHRLQSGVDDHARLARTSALARHTDNAEAM WSGLRTFCTLMMIGAWSIASQWDAGANALTLAAISCVLYSAVAAPFKSLSLLMRTLVLLS LFSFVVKFGLMVQISDLWQFLLFLFPLLATMQLLKLQMPKFAALWGQLIVFMGSFIAVTN PPVYDFADFLNDNLAKIVGVALAWLAFAILRPGSDARKSRRHIRALRRDFVDQLSRHPTL SESEFESLTYHHVSQLSNSQDALARRWLLRWGVVLLNCSHVVWQLRDWESRSDPLSRVRD NCISLLRGVMSERGVQQKSLAATLEELQRICDSLARHHQPAARELAAIVWRLYCSLSQLE QAPPQGTLAS >gi|299856418|gb|ADWV01000033.1| GENE 28 30414 - 31271 559 285 aa, chain - ## HITS:1 COG:ECs2353 KEGG:ns NR:ns ## COG: ECs2353 COG1566 # Protein_GI_number: 15831607 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Escherichia coli O157:H7 # 1 285 15 299 299 548 98.0 1e-156 MSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQSPWTRDGKIRAEKVSITPQVSGRIVELNI KDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFISAEE LDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLF ALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLRGHVSSIGRAIYDQSVESDSS LIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSGTTCSIAVGQ >gi|299856418|gb|ADWV01000033.1| GENE 29 31274 - 31510 126 78 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1934 NR:ns ## KEGG: ECUMN_1934 # Name: ydhI # Def: conserved hypothetical protein; putative inner membrane protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 78 1 78 78 105 100.0 4e-22 MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMD LSLFAICVCLALAILIAW >gi|299856418|gb|ADWV01000033.1| GENE 30 31705 - 32145 328 146 aa, chain + ## HITS:1 COG:ECs2351 KEGG:ns NR:ns ## COG: ECs2351 COG1846 # Protein_GI_number: 15831605 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 146 1 146 146 241 100.0 4e-64 MKLESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGI EQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISEMEAVINKTRAEILHGI SAEELEQLITLIAKLEHNIIELQAKG >gi|299856418|gb|ADWV01000033.1| GENE 31 32192 - 32659 571 155 aa, chain - ## HITS:1 COG:slyB KEGG:ns NR:ns ## COG: slyB COG3133 # Protein_GI_number: 16129599 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein # Organism: Escherichia coli K12 # 1 155 1 155 155 212 99.0 2e-55 MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGTIVNVRPVQIQGGDDSN VIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGVQSAMNKTQGVELEIRKDD GNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR >gi|299856418|gb|ADWV01000033.1| GENE 32 32933 - 34042 884 369 aa, chain + ## HITS:1 COG:ydhH KEGG:ns NR:ns ## COG: ydhH COG2377 # Protein_GI_number: 16129598 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted molecular chaperone distantly related to HSP70-fold metalloproteases # Organism: Escherichia coli K12 # 1 369 1 369 369 709 99.0 0 MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSLKQAVLDICQGQQLTLS QFGQLDTQLGRLFADAVNALLKEQNLQARDIVAIGCHGQTVWHEPTGVAPHTLQIGDNNQ IVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHSTERRMVLNIGGIANLSLLIPG QPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGKVILPLLQNMLSDPYFSQPAPKS TGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAVTISEQVLLSGGCERLMVCGGGSRN PLLMARLAALLPGTEVTTTDAVGISGDDMEALAFAWLAWRTLAGLPGNLPSVTGASQETV LGAIFPANP >gi|299856418|gb|ADWV01000033.1| GENE 33 34146 - 34469 250 107 aa, chain + ## HITS:1 COG:STM1447 KEGG:ns NR:ns ## COG: STM1447 COG3895 # Protein_GI_number: 16764795 # Func_class: R General function prediction only # Function: Predicted periplasmic protein # Organism: Salmonella typhimurium LT2 # 1 107 3 109 109 189 83.0 1e-48 MKKLLLICLPVLLTGCSAFNQLVEHMQTATLEYQCDEKPLTVKLNNPRQEVSFVYDNQLL HLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNCQLQNPQR >gi|299856418|gb|ADWV01000033.1| GENE 34 34528 - 35184 670 218 aa, chain + ## HITS:1 COG:pdxH KEGG:ns NR:ns ## COG: pdxH COG0259 # Protein_GI_number: 16129596 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxamine-phosphate oxidase # Organism: Escherichia coli K12 # 1 218 1 218 218 430 99.0 1e-120 MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACEAKLADPTAMVVATVDE HAQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLLFPWHTLERQVMVIGKAER LSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGG FRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP >gi|299856418|gb|ADWV01000033.1| GENE 35 35313 - 36374 811 354 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 4 353 7 357 418 317 46 9e-86 MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKR FQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENS AIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQG YDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTE GGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRGQ YVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEME Prediction of potential genes in microbial genomes Time: Sun May 15 15:52:44 2011 Seq name: gi|299856417|gb|ADWV01000034.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont33.1, whole genome shotgun sequence Length of sequence - 34399 bp Number of predicted genes - 32, with homology - 32 Number of transcription units - 13, operones - 8 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 13 - 72 2.8 1 1 Op 1 . + CDS 114 - 446 112 ## SeHA_A0073 relaxosome component 2 1 Op 2 . + CDS 457 - 3156 1546 ## SeHA_A0074 putative relaxase/mobilization nuclease domain protein + Term 3163 - 3200 7.1 - Term 3151 - 3187 10.1 3 2 Op 1 . - CDS 3193 - 5484 837 ## SeHA_A0075 TrbC 4 2 Op 2 . - CDS 5477 - 6547 531 ## SeHA_A0076 TrbB 5 2 Op 3 . - CDS 6566 - 7774 586 ## SeHA_A0077 conjugal transfer protein - Prom 8014 - 8073 4.2 + Prom 8560 - 8619 2.0 6 3 Tu 1 . + CDS 8841 - 9137 104 ## SC083 hypothetical protein - Term 9147 - 9184 2.3 7 4 Tu 1 . - CDS 9202 - 9378 222 ## ECSE_P1-0081 hypothetical protein - Prom 9592 - 9651 2.4 + Prom 9493 - 9552 5.8 8 5 Tu 1 . + CDS 9770 - 9979 210 ## SeHA_A0082 hypothetical protein + Term 10216 - 10266 -1.0 - Term 9994 - 10037 6.3 9 6 Op 1 . - CDS 10051 - 10713 409 ## SeHA_A0083 surface exclusion protein 10 6 Op 2 . - CDS 10778 - 12979 351 ## SC079 integral membrane protein 11 6 Op 3 . - CDS 13037 - 13516 234 ## SeHA_A0085 TraX 12 7 Op 1 . - CDS 13650 - 14852 833 ## SC077 lipoprotein 13 7 Op 2 . - CDS 14819 - 15244 64 ## SeHA_A0087 TraV - Prom 15362 - 15421 2.4 - Term 15369 - 15397 1.0 14 8 Op 1 . - CDS 15433 - 16149 481 ## SC075 TraU-like protein 15 8 Op 2 . - CDS 16200 - 18122 868 ## SeHA_A0098 DNA primase 16 8 Op 3 . - CDS 18119 - 18430 137 ## SeHA_A0102 lipoprotein 17 8 Op 4 . - CDS 18361 - 19236 232 ## COG0582 Integrase - Prom 19480 - 19539 5.4 18 9 Op 1 . - CDS 20966 - 22294 497 ## ECSE_P1-0107 shufflon protein 19 9 Op 2 . - CDS 22294 - 22692 106 ## ECSE_P1-0108 prepilin peptidase PilU - Prom 22839 - 22898 4.7 - Term 22839 - 22877 6.2 20 10 Op 1 . - CDS 22935 - 23495 52 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 21 10 Op 2 . - CDS 23505 - 24119 341 ## SeHA_A0112 typeIV prepilin 22 10 Op 3 24/0.000 - CDS 24137 - 25234 477 ## COG1459 Type II secretory pathway, component PulF 23 10 Op 4 . - CDS 25247 - 26800 562 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 24 10 Op 5 . - CDS 26811 - 27263 186 ## SeHA_A0115 type IV pilus biogenesis protein PilP 25 10 Op 6 . - CDS 27250 - 28545 184 ## SeHA_A0116 PilO protein 26 10 Op 7 . - CDS 28538 - 30220 448 ## COG1450 Type II secretory pathway, component PulD 27 10 Op 8 . - CDS 30234 - 30671 233 ## SeHA_A0118 PilM protein 28 10 Op 9 . - CDS 30671 - 30988 164 ## EcE24377A_D0051 PilL protein 29 11 Tu 1 . - CDS 31772 - 32224 -26 ## ECSE_P1-0118 PilK protein - Prom 32274 - 32333 1.7 30 12 Op 1 . - CDS 32412 - 32864 238 ## ECSE_P1-0119 PilJ protein 31 12 Op 2 . - CDS 32907 - 33161 155 ## ECSE_P1-0120 PilI protein - Prom 33195 - 33254 2.3 32 13 Tu 1 . - CDS 33713 - 34093 113 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|299856417|gb|ADWV01000034.1| GENE 1 114 - 446 112 110 aa, chain + ## HITS:1 COG:no KEGG:SeHA_A0073 NR:ns ## KEGG: SeHA_A0073 # Name: not_defined # Def: relaxosome component # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 110 17 126 126 161 87.0 8e-39 MSDKRQRSGSERRQKTILRAVRFSPDEDETICKNAEDSGLTVSAYIRNAALNKRINSRTD DAFLKELMRLGRMQKHLFVQGKRTGDKEYAEVLVAITELTNTLRKQLMEG >gi|299856417|gb|ADWV01000034.1| GENE 2 457 - 3156 1546 899 aa, chain + ## HITS:1 COG:no KEGG:SeHA_A0074 NR:ns ## KEGG: SeHA_A0074 # Name: not_defined # Def: putative relaxase/mobilization nuclease domain protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 899 1 899 899 1775 99.0 0 MNAVIPKKRRDGKSSFEDLVSYVSVRDDMTDEELDLSSSSQAEQPHRSRFSRLVDYATRL RNESFVALVDVMKDGCEWVNFYGVTCFHNCTSLETAAADMEYIARQAHYAKDDTDPVFHY ILSWQSHESPRPEQIYDSVRHTLKSLGLADHQYVSAVHTDTDNLHVHVAVNRVHPETGYL NRLSWSQEKLSRACRELELKHGFAPDNGCWVHAPGNRIVRKTAVERDRQNAWTRGKKQTF REYVAQTAVAGLRSEPVHDWLSLHRRLAEDGLYLSQMDGKFLVMDGWDRNREGVQLDSFG PSWCAEKLMKKMGDYTPVPKDIFSQVEAPGRYNPDFIATDVRPEKIAETESLQQYACRHL GERLPEMAREGRLENCLAIHRTLAEAGLWMRVQHGHLVICDGYDHNQTPVRADSVWSLLT LDNVNQLDGGWQPVPTDIFRQVTPTERFRGRRMESCPATDKEWHRMRTGTGPQGAIKREL FSDKESLWGYSISHCSPQIEEMITQGEFTWQRCHELFAQQGLMLQKQHHGLVVVDAFNHE QTPVKASSIHPDLTLGRAEPQAGPFVSAPADLFDRVQPENRYNPELAVSDRYGVSSKRDP MLRRQRREARAEARADLRARYLAWREQWRKPDLRYGERCREIHQACRLRKSHIRAQYDDP ALRKLHYHIAEVQRMQALIRLKEDIRDERQKLIADGKWYPPSYRQWVEIQAAQGDRAAVS QLRGWDYRDRRKDKSRTTTTDRCVVLCEPGGTPVYGNTGDLEARLQKNGSVRFRDRRTGE FVCTDYGDRVVFRNHHDRNALADKLDLIAPVLFGRDPRMGFEPEGNDKQFNQVFAEMVAW HNVTGRTGHEDYRITRPDVDHHREGSERYYRDYIAANSNDDASLPPPEQDKRWEPPSPG >gi|299856417|gb|ADWV01000034.1| GENE 3 3193 - 5484 837 763 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0075 NR:ns ## KEGG: SeHA_A0075 # Name: not_defined # Def: TrbC # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 763 1 763 763 1566 100.0 0 MSEHRVNPELLHRTAWGNPVWNALQSLNIYGFCLVASLVASFIWPLALPACLLFTLITML VFSLQRWRCPLRMPMTLECADPSQDRMIKRSLFSFWPTLFQYEVILESPASGIFYVGYQR VRDIGRELWLSMDDLTRHIMFFATTGGGKTETIFAWAINPLCWARGFTLVDGKAQNDTAR TIWYLARRFGREDDVEVINFMNGGKSRSEIILSGEKTRPQSNTWNPFCYSTEAFTAETMQ SMLPQNVQGGEWQSRAIAMNKALVFGTKFWCVREGKTMSLQMLREHMTLEGMAKLYCRGL DDQWPEEAIAPLRNYLQDVPGFDLSLVRTPSAWTEEPRKQHAYLSGQFSETFSTFTEAFG DIFAEDSGDIDIRDSIHSDRILMVMIPALDTSAHTTSALGRMFITQKSMILARDLGYRLE GTDSDALEVKKYKGRFPYLCFLDEVGAYYTDRIAVEATQVRSLDFALILMAQDQERIEGQ TTATNTATLMQNTGTKFAGRIVSEGSTARTLKSAAGEEARARMNNLQRQDGIFGESWIDS PQISILMESKINVQELIELHPGEFFSIFRGETVPSASFFIPDDEKSCSSDPVVINRYISV DAPRLDRLRRLVPRTTQRRIPSPENVSAIIGVLTAKPSRKRRKIRTEPHTIVDTFQQRIA GRQAAMAMLEEYDTDINARESALWETAVNTLKTTTREERRIRYITLNRPELPETKEENQI SVRAERAGINLLTLPQDNNHPTGRPVNGFHHKKTNRPDWDGMY >gi|299856417|gb|ADWV01000034.1| GENE 4 5477 - 6547 531 356 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0076 NR:ns ## KEGG: SeHA_A0076 # Name: not_defined # Def: TrbB # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 356 1 356 356 724 99.0 0 MTIEYFATRIAKHISVQAIWPDGRTEIIAVLPRDALSGLVTRNNQLIHIAFDAMGTRNRE TVLIDKQEHNADQILTAIDSCLRLEYLMERRFSRTPLFRGIIASVVLFVMATIGFSLFRY VDRVFWDDTTPEAVQTAGEPRLLPPHLNHTVPLNEGIQLPVPPKKDVQVPEKTITSKNPE AAAARHNLATVLKRNADRGMFTINLSSGHERTLFAFLDPACPNCRLLEPALKRLASDFNV VIYPVSVIGGEESTDRVAPLLCEKDAQKRAAGWHRLYSADNGMMTPSEETTPADETCLKA ARAAIDVNNVAFRKFGFAGTPWVLSDTGWHLPTGILQETGTLNLFLKTTDSESGHE >gi|299856417|gb|ADWV01000034.1| GENE 5 6566 - 7774 586 402 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0077 NR:ns ## KEGG: SeHA_A0077 # Name: not_defined # Def: conjugal transfer protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 402 1 402 402 768 99.0 0 MSYNRQPVAEDPMQIWGAVGVLLILLLFVIWLFLPEVVYASCLILHTLWGLVDWGPFHNY AAPRYNLLAMTGNNAANISYSQWVNVMEQTIGILWMYLLPVTLWCLWEWYQHPGQSRFTR RPVDITRLPYIFASLSPAIAPVLADGDPEKLFHGGKRPERRVALTPEAFVEQHTLITNMQ LDVAAARRCFMAQLGKPLTSWKDMAPHEKALFAIFGLQYFLDDRKAALKLMDTLNLSCRI KSKRDSGKFCTPVYSLAKSAFQRVIKSNGAQQWLKQHRYVRSGLVWLYAHDLRLTPPNWI WLKGVDRTLFYALHRANTTKGFIEGAGVVAVARAEAEAMRFGLPCPEPCVDEAVEGLRRD MLSLGLIWDEPQPDRDRKRRILTNWSLTDDILPRTPATDNEF >gi|299856417|gb|ADWV01000034.1| GENE 6 8841 - 9137 104 98 aa, chain + ## HITS:1 COG:no KEGG:SC083 NR:ns ## KEGG: SC083 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 98 1 98 98 142 98.0 4e-33 MSALRHVLSGILFSGKNRLQVLAKTSGGAGFGALVGEELSITDTIETVVTGSVRANNGVL SPVMEKRMINLLIIVLRAVVAVANALIAVLELIRELID >gi|299856417|gb|ADWV01000034.1| GENE 7 9202 - 9378 222 58 aa, chain - ## HITS:1 COG:no KEGG:ECSE_P1-0081 NR:ns ## KEGG: ECSE_P1-0081 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 58 23 80 80 108 100.0 8e-23 MNLVDAFVKKVISGPYKEYGKWWIDVEYISWGVPGKTRLMFESKEQALEVKEGYKFLT >gi|299856417|gb|ADWV01000034.1| GENE 8 9770 - 9979 210 69 aa, chain + ## HITS:1 COG:no KEGG:SeHA_A0082 NR:ns ## KEGG: SeHA_A0082 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 69 1 69 69 127 100.0 2e-28 MSMPPAIANTFLFEMMKSKSKDVTLAAIYALGEGRCQAENITRELHRLSQSDDMEIKIAA IKALGRIYR >gi|299856417|gb|ADWV01000034.1| GENE 9 10051 - 10713 409 220 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0083 NR:ns ## KEGG: SeHA_A0083 # Name: not_defined # Def: surface exclusion protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 220 1 220 220 425 94.0 1e-118 MKDKKETPDRFPTWWLLYYVLRKAYFFLGIPFFLFCALTSTLMLFSSRYYGDNIEDYVVT FGSWFLLLAPGIWMYSRAKTRREKIRKVVQTIKESGFYSPEKGYEGLSLTQGAYFGIDLK NGTMLYVRIYPGNIMDVIGFDIHNFTRTVTDDKTLEIHTKYINLPMVPIPSWCTHPETAS NTMHAMASRGYDYPVDFPRLIQEKRKEWEQIAGMPVAEVF >gi|299856417|gb|ADWV01000034.1| GENE 10 10778 - 12979 351 733 aa, chain - ## HITS:1 COG:no KEGG:SC079 NR:ns ## KEGG: SC079 # Name: traY # Def: integral membrane protein # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 733 11 745 745 1260 92.0 0 MAFAHTQFYSGVTVKILLRALCAGLAISSLPAMASVTYQDIVSAATNPDDLSRQALVTIF GDVVTNPLSTSAPTLIGSMFGAFNSIIAVLAVVWFMFIGIRHVVRSGHQGQVFSTGRDIV GTLSVVAGFLMIVPTGNGWSIAQLIMLWGASIMGVGSANVMVQLAADNIANGYSMTVQPV QASTQTAARGIFEMELCKYAVNAGLNDFNQTAKSSTSLMTESAKTASGNYTVTVSNGSGI CGSASLSVEGNGTTDQSTIGKFFNPFSKNEYSGVISAQRAAMDNMISDMDNAASEFVTTF LEKRNSGNGTLPDIETRIQRAADEYERAVQKSLPTDNGEQSRKEALKSYLTTYGWVTLGA WYQTFATANQRLAELADRAPAVTSMSSLGEVGDTDLFSAVMSAYKTQLQNTTYTPPLGTV TSANEQRMANAQDPKSALSEMMSFFVYRTNWIATEISGTGTTSDQVNPLIKMKNIGDYTL GTTEILWSGYTTVRVLATVGDNSIFGKVANLFSGLPKGLVALLDAAAPPIYFLLFLLFCA GFSLSIYLPFIPFIFWMTGIGNWIVSVLIGCTAGPLWAATHLGTSEDRGSRAAYGYIYLI DSMIRPPIMVFGFFFASVAIIAVGTILNALFGAALVNVQFNSLTGIFSLAGFLLIYARIC TTSVAAIFALQAYLPDHVINFLGGREGANTLGSMANSVKEIFIGGSRNIRHTPGMKTDRL KDKGSDDKDGIKG >gi|299856417|gb|ADWV01000034.1| GENE 11 13037 - 13516 234 159 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0085 NR:ns ## KEGG: SeHA_A0085 # Name: not_defined # Def: TraX # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 159 36 194 194 284 100.0 8e-76 METRLITNSVQHMLEQQKRRLDRFRQVNNKKAQLHLTWEEALQASHMSVDDLDRRFRRRR TVWRFCCWSLLAIALFLSGMLFAASSLPLTTLVRAISTLVLILSGVALCASRALIVTYRL WQLHERKVSEPEQGTFRDFLNDRNGWRNATLIAVTSKQY >gi|299856417|gb|ADWV01000034.1| GENE 12 13650 - 14852 833 400 aa, chain - ## HITS:1 COG:no KEGG:SC077 NR:ns ## KEGG: SC077 # Name: traW # Def: lipoprotein # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 400 1 400 400 653 100.0 0 MQRKTLLAALIATLSGTACQAHAYSVTVVASRPVEEQVIPRMEAIKDVLGNILSTQTATG TAINQNSEKLASVIAQNGQATRQQMIFSNETQRLEEARKSFTVPDSICSESASGIATESK SASASAASKLSKGGGVSNRSIRDRLASAANSPVREAYDGAAIHASYCTEAEYARFGGTAV CPSVGEIPGGDSQVRSIYHGAGTADTPAALTWDQKQIDAATAYMKNTSRPSAGRALGKGE VNTQSGRTYVGLQNEYNGIIDSASNPQLTLIADSTPNESTRKALAETLQSDSAAAYFDQV ASPEAKARGYMSTREFEAFEAGRRYANTAYLVDLQEMQGDNLLRELVRITAQMNWQLNDL KEQIRQGNVISGQQLALTARQYYEKQLGSLEKTINQANAR >gi|299856417|gb|ADWV01000034.1| GENE 13 14819 - 15244 64 141 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0087 NR:ns ## KEGG: SeHA_A0087 # Name: not_defined # Def: TraV # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 141 64 204 204 263 98.0 1e-69 MRLLLPSSTDELITTAIWQVSVPDEAPFDVQHVIQWILPSPLASLMSDDTWLWPSVPGTP ALSAGDWPVMDTDPSTLRRVRRRSFSIIDNRNRKGYITRRFQCFPLAPLPENRKYDSLPD LVLHPEQETIKCKEKHYSQPL >gi|299856417|gb|ADWV01000034.1| GENE 14 15433 - 16149 481 238 aa, chain - ## HITS:1 COG:no KEGG:SC075 NR:ns ## KEGG: SC075 # Name: traU # Def: TraU-like protein # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 238 399 636 636 487 100.0 1e-136 MYLLAGQIAGGDFTLPQYRDEVLKQLPREYHEIALKRINQLDQEVKTKVYDELHNARGID FIWENLDTQEREQRKFAIRTVLSTQYLRDYPESVLKSANTLWLLRYKPEDIPVLRDNFNV PEFMLKRFLKMPEGPAPDGSGVPVLGVFRVKSGTLARILKFTVGPLELWALNSSPKDSAL RKTLTNKLGSVRARKILAENFPRGSATSLIEHRAGQHNSDNVIEELASELIRKQGYNL >gi|299856417|gb|ADWV01000034.1| GENE 15 16200 - 18122 868 640 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0098 NR:ns ## KEGG: SeHA_A0098 # Name: not_defined # Def: DNA primase # Organism: S.enterica_Heidelberg # Pathway: not_defined # 165 640 607 1082 1255 816 93.0 0 MNIPDEFGLFPFQRFTADELRHFFVWCAAHKVSDVDLTGGSPVSVSRFGRRVRCSSATLP TTLMSSLIDELFGREVIPRVLAGNPVDRTIQINGDASGRYGLKRGERIRLRSHLIQGTSG AEEKAISITMRVIPTEIPDILSMNIEPDLLEAMVCKSGLGFVCGEEAVSHVTEDIPLQPE PFLPESDGPEEYENYSAYQELMNNENPEHLQENSDMPSQPDTDHVQADESELQATTDTAE PAVRDEPNPQQPVQSTSPSDNTSSFLDKARGFFTRKKTDSQAHENSDPTPSPETTTTTPT PDSIVYAPERPDAPISLNLDEIIKSLKGEKRADRTVLYKLDGKPAFIDRVNRLEMVDGAS NDDRSVLAALAVATNFYGGVIELTGSDAFKQKAMRLIIEHNINVRMKHADQRLELDTLRK EMAVGKDAVVTHQPTPELNRNTPEQPVVPDPVQEKEATQSPASPVAPEASTVSTVPASSP AEPGKTADAAQGEEPPGKLRPGESVTAVLHNFGRAEYAPGKGESFFVELKNRSGSKLYWG EQLESLVKNHQKGDVVTLTLQNREQFILPGEQKARFRNKWSMESVTNGISVSHDNPDKGQ RIQAIPVETFMKVAAQISQGWPEEMKALRMPENVGSSLSI >gi|299856417|gb|ADWV01000034.1| GENE 16 18119 - 18430 137 103 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0102 NR:ns ## KEGG: SeHA_A0102 # Name: not_defined # Def: lipoprotein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 103 170 272 272 198 99.0 5e-50 MQRKVWETALRQGWQEGRQNADLTLEANQKTLTRDYRGMMLYSLLWRQGMITRPDVSDQM QTVTGDGKKLVTGDRVRRLKNHAEFNLQKSHWRPLIGTEGGSR >gi|299856417|gb|ADWV01000034.1| GENE 17 18361 - 19236 232 291 aa, chain - ## HITS:1 COG:RSc1554 KEGG:ns NR:ns ## COG: RSc1554 COG0582 # Protein_GI_number: 17546273 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Ralstonia solanacearum # 4 259 73 329 354 140 39.0 3e-33 MPSPRIRKMSLSRALDKYLKTVSVHKKGHQQEFYRSNVIKRYPIALRNMDEITTVDIATY RDVRLAEINPRTGKPITGNTVRLELALLSSLFNIARVEWGTCRTNPVELVRKPKVSSGRD RRLTSSEERRLSRYFREKNLMLYVIFHLALETAMRQGEILALRWEHIDLRHGVAHLPETK NGHSRDVPLSRRARNFLQMMPVNLHGNVFDYTASGFKNAWRIATQRLRIEDLHFHDLRHE AISRFFELGSLNVMEIAAIQKAASFQKTACNEKCGKPHYGRDGRKEDKTPT >gi|299856417|gb|ADWV01000034.1| GENE 18 20966 - 22294 497 442 aa, chain - ## HITS:1 COG:no KEGG:ECSE_P1-0107 NR:ns ## KEGG: ECSE_P1-0107 # Name: not_defined # Def: shufflon protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 393 1 387 430 641 94.0 0 MKKYDRGWASLETGAALLIVMLLIAWGAGIWQDYIQTKGWQTEARLVSNWTSAARSYIGK NYTTLQGSSTTTTPAVITTTMLKNTGFLSSGFTETNSEGQRLQAYVVRNAQNPELLQAMV VSSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVL LSTDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQTGNFSGNVNG VNGTFSGQVKGNSGNFDVNVTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDGSWVRS VNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAILSCQS GTWKSSSASIWTNIKTFTLYPKNTQVLGRFKLCINTYRIDGREMAETEVVPIDMPDSNGE MTWQAKNYTQYSSYFMKITCLK >gi|299856417|gb|ADWV01000034.1| GENE 19 22294 - 22692 106 132 aa, chain - ## HITS:1 COG:no KEGG:ECSE_P1-0108 NR:ns ## KEGG: ECSE_P1-0108 # Name: not_defined # Def: prepilin peptidase PilU # Organism: E.coli_SE11 # Pathway: not_defined # 1 132 87 218 218 240 100.0 1e-62 MAVTDALTGLLPGTFTRRFLIAGMLSQITTDIWWFRTTEFATAAIVLFCLHKLVNRHRLN IGTGDLWLIAGITAWSGLYNAIWCVLLGTGGFVLWHSTWCIKGHKEGPLGPWLCFGHVLL LLDNLYQPLWVI >gi|299856417|gb|ADWV01000034.1| GENE 20 22935 - 23495 52 186 aa, chain - ## HITS:1 COG:Z4175 KEGG:ns NR:ns ## COG: Z4175 COG0741 # Protein_GI_number: 15803375 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli O157:H7 EDL933 # 41 167 28 153 167 140 52.0 1e-33 MSGGTVPLRLISLILLFSLIPPARASYVAPKQIWTNKWDNCFAAAGARYQIEPLLLKAIS AGESSLRPGAININKDKKTGKASSTDYGLMQINSTHIPKLINMGVIKKSEDLITKPCLNI HIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYANKIWRIYRDMKGICLPGQGG RQCRQS >gi|299856417|gb|ADWV01000034.1| GENE 21 23505 - 24119 341 204 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0112 NR:ns ## KEGG: SeHA_A0112 # Name: not_defined # Def: typeIV prepilin # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 204 1 204 204 300 100.0 2e-80 MLVENINTTLTGNNKKNEPHDKGWAILEQGTIALVVLFVIVVVLGSLYALRTRANVATET ANIQTIITSAQSLLKGSDGYTFTSSAKMTGALIQMGVIPSGMTVQGDKTSGTATLYNAWG GAVTVAPASTSGFNNGFTVTYDKVPQDACIQIATRISKTGLTNGITLNSTAHSDGKVTTE EASTQCKADNGSTGTNKLIFTING >gi|299856417|gb|ADWV01000034.1| GENE 22 24137 - 25234 477 365 aa, chain - ## HITS:1 COG:VC0836 KEGG:ns NR:ns ## COG: VC0836 COG1459 # Protein_GI_number: 15640853 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Vibrio cholerae # 17 275 2 255 340 62 24.0 9e-10 MREMNFSQRLRRFIVRKTFSAPYRVQFYEALRFLLENKQPLKTALEQMRDAWTDFGRKWH PFAELATDCIESLRENSGENSLEYTLSLWVPQEEAAVISAGIRSGSIVDALQFATTLTDA KEQIHQAIWQMAIYPVGLLIMMTGTLYVLNTELIPELSKISSPDSWSGALGFLYGLSVFV DNYGAICAVLFAVITGLISWSLPNWKSPDSVRTFADKIMPWSIYQDIQGATFLLNMAALL KAKMTTLNSLNILQEFASPWLSTRLDSIIYRVRQGDHLGLALRQCGYQFPSREAANFLSL LQGDGATELISNYGQRWLSQTLQRVKKRANVIRLIMLIFLVMSLMLLVFAIMDIQSISDN SMGNF >gi|299856417|gb|ADWV01000034.1| GENE 23 25247 - 26800 562 517 aa, chain - ## HITS:1 COG:VC0835 KEGG:ns NR:ns ## COG: VC0835 COG2804 # Protein_GI_number: 15640852 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Vibrio cholerae # 81 472 82 443 503 172 30.0 2e-42 MDKYNLKDALLFISRGDTHEILIETNQRTRPDVQSNLQELLKLYPDINPKVVSLSELQEA GQDEKNRGPKERIIHLKDLADVSESEKKVLSYFETARKLGASDIHFLISESIFKVRMRIF GELQTVDEDQPALGYSLCATAILSMADVTETSFFPQREQDARLSPQLMRKIGIFGARYSH RPTGDGLIAVMRLIPDDGDKVPTFKQLGFIPEQIRLLNIMLRRPEGKIVLSGPTGSGKST TLRSACRVYLDDNQGRHLLTIEDPLEGQILGATQTPIICDKSDEDAVKLAWSRAISSAMR LDPDAIMEGEMRDLISMMSTTYAAQTGHIVLTTLHTNSALGIPERMITMGMNADLICDAQ LLIGMISQRLVPTLCPSCRIPWEKRAPELSDDERDYLERHCNKDSLCSTDNIWFRNHHGC SECNHDVIINGRKRGEIGKGLTGRTVIAEVIEPDNRLFQILKTRGKVAARKYWLENMKGI SRVEHLLRRINEGLVDPLEADRIIPLDEDERLSIDDV >gi|299856417|gb|ADWV01000034.1| GENE 24 26811 - 27263 186 150 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0115 NR:ns ## KEGG: SeHA_A0115 # Name: pilP # Def: type IV pilus biogenesis protein PilP # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 150 1 150 150 214 99.0 6e-55 MRPGKLLIIPSIFFFSGFSFATTQPLVTIGELEAQQNRNILLQAKVQGAQLQKQLEESDV TSSSETVSGFSGVTASLPSVSEQPTSKNRKELPVIMEINGKDKRLNAVLRMADGRQTSVT TGSQLPGTSVTVKSISLSGVTLSDGTTLTF >gi|299856417|gb|ADWV01000034.1| GENE 25 27250 - 28545 184 431 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0116 NR:ns ## KEGG: SeHA_A0116 # Name: not_defined # Def: PilO protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 431 1 431 431 823 99.0 0 MADEDINPVVLLADPKVNHRVWAACLKWSPVVKKQRVPSHQKHKPHVKSRRLTSLKVTVG SRSSRGKISRITGTGILARPERNHYFSLALAFCSWVRNGYGVFRYSDKELLFLASINGQP AVMADLSGNDADVAQKVSLFLTMNEEPPEKWQVVSPLEHPDNWESIITRLSSADLRRCKL TVGNRSKFTLPAVLFLVAASAGTVFWMTQPEPDVVPTPEEIAARARLQFKKPDPPPELPH PWASQPVISDFLKACADLRKPSPVALEGWKLTGGTCTPETFTLIYERQPGGTIEGFLARS KEIFNVIPDFNLKDGARLASVTRPLPSLPRRDEAVPTPSEQLMRVFTWFQKKQLTPAINE IAIPEPLPGNDGEPAPVQKWKEYQFSLSTPVNPDELFPLFQDTGVRLSNIHFELNGGTFS YSSEGHIYASR >gi|299856417|gb|ADWV01000034.1| GENE 26 28538 - 30220 448 560 aa, chain - ## HITS:1 COG:Cj1474c KEGG:ns NR:ns ## COG: Cj1474c COG1450 # Protein_GI_number: 15792789 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulD # Organism: Campylobacter jejuni # 215 552 110 453 472 63 22.0 1e-09 MKKSHQRSMKLAVLPCMIAVALSISGCTFSEINKMQKKAQEDSAHAREKVSALSARKSQA LTWLDNQWINPVPVAQVSREKKQTAPACYITQARKGEITLQELGQRITAVCGIPVIITPD AANSTLEGGATRQMTGTLPAPDENGRLPLSSLGSTTMTTSTQPLTLNNLMWQGDINGLLD LMASRSGLYWRMDNGRIVFYLTETRTYPLHMLNTKTSSSSSVSSGSTSTMGATGGQDNSA SGDATSSQSTTVGQEYDLYEDIRKTIEAMLTPEKGRYWLSASSSTLTVTDTPAVQEAVAR YVDEQNSIMNRQVALNVQVLSVSNTRNEQFGLDWNLVYKSLHSAGATLNNASGDFTGATS AGVSILDTATGNAAKFSGSSLLIKALSEQGDVSVVTSQESTVTNLTPVPIQMADQTVYVA QSATTTTTDVGATTTLTPGMITTGFNMTLLPLIQKTGNLQLQMNFNLSDPPTIRSFTSKD GNSYIEMPYTKLRSLSQKVNLKEGQSLVVTGFDQNNTTTSKAGTFTPANPLFGGSQTGKN ERSTLVIIITPTFPSGGNNG >gi|299856417|gb|ADWV01000034.1| GENE 27 30234 - 30671 233 145 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0118 NR:ns ## KEGG: SeHA_A0118 # Name: not_defined # Def: PilM protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 145 1 145 145 258 100.0 4e-68 MGWLVMAVGLTILIITGSYQNQKMSETTNAQQYASASVWASQILMIANRINDIRYVSGQQ DGVISSDKLALPVTPDSRIKHQLQQGRLWVWMPEQPGLVETLRSKSRGSALIGIFQNGQL TWLSGTATGLTPPAGITAGSVVYVN >gi|299856417|gb|ADWV01000034.1| GENE 28 30671 - 30988 164 105 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_D0051 NR:ns ## KEGG: EcE24377A_D0051 # Name: not_defined # Def: PilL protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 105 251 355 355 205 100.0 5e-52 MTGTPVKPVSQGKEWRAPAGTTLRENIIKWAEETKCESMASTHWMVIWPLSVTDYRLDAP LMFRGSFESAMEQVFELYRTAQKPLYAQASRMQCIITVSDTRDGR >gi|299856417|gb|ADWV01000034.1| GENE 29 31772 - 32224 -26 150 aa, chain - ## HITS:1 COG:no KEGG:ECSE_P1-0118 NR:ns ## KEGG: ECSE_P1-0118 # Name: not_defined # Def: PilK protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 150 47 196 196 283 97.0 1e-75 MVIICFSPLLFRCVLLIVRSVSKYNFTFFAKKNGSKESSIHLSPYADTRCPESMRKHWDV LLSLISKAINNDETIVMHSHLFTPARINKLIKRLESYGLNFSVITCPRKTSLYERLSIPF VYLLFQWSLPHLHSDGMTVVIRPLQPPHTN >gi|299856417|gb|ADWV01000034.1| GENE 30 32412 - 32864 238 150 aa, chain - ## HITS:1 COG:no KEGG:ECSE_P1-0119 NR:ns ## KEGG: ECSE_P1-0119 # Name: not_defined # Def: PilJ protein # Organism: E.coli_SE11 # Pathway: not_defined # 47 150 1 104 104 192 96.0 3e-48 MSFLFKLTIAILIVFAILFPILISSDNKLSALFWKIPKDFWVFLIIMYGAIITVVFIESS EQARIRRQQYLQQYKMPNEIHENVVIKNSIISRETTDDESDINTLYLDSFKSKNNCKSFE TNSNLLDKNGKPVEIMVCDVQELHFFVPKN >gi|299856417|gb|ADWV01000034.1| GENE 31 32907 - 33161 155 84 aa, chain - ## HITS:1 COG:no KEGG:ECSE_P1-0120 NR:ns ## KEGG: ECSE_P1-0120 # Name: not_defined # Def: PilI protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 84 1 84 84 153 96.0 2e-36 MPQQHPGRLQVLVVDTHCKRKLFSTKTQTDPDELARRFCTPDNCLVVVLCNNRFLFRLER APGSHCRWRKGSRSRHQHLQDWLS >gi|299856417|gb|ADWV01000034.1| GENE 32 33713 - 34093 113 126 aa, chain - ## HITS:1 COG:yi22 KEGG:ns NR:ns ## COG: yi22 COG2801 # Protein_GI_number: 16132094 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 126 176 301 301 260 98.0 4e-70 MLGAVERRFGNELPASPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAES FVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSD NRCLEI Prediction of potential genes in microbial genomes Time: Sun May 15 15:54:35 2011 Seq name: gi|299856416|gb|ADWV01000035.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont34.1, whole genome shotgun sequence Length of sequence - 34911 bp Number of predicted genes - 37, with homology - 37 Number of transcription units - 20, operones - 8 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 21/0.000 + CDS 1648 - 3243 1578 ## COG0547 Anthranilate phosphoribosyltransferase 3 1 Op 3 13/0.000 + CDS 3247 - 4605 1267 ## COG0134 Indole-3-glycerol phosphate synthase 4 1 Op 4 37/0.000 + CDS 4617 - 5810 1360 ## COG0133 Tryptophan synthase beta chain 5 1 Op 5 2/0.875 + CDS 5810 - 6616 391 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc + Term 6624 - 6656 5.4 + Prom 6799 - 6858 4.8 6 2 Op 1 3/0.625 + CDS 6997 - 7176 212 ## COG3729 General stress protein + Term 7217 - 7256 6.2 7 2 Op 2 4/0.625 + CDS 7262 - 7762 603 ## COG3685 Uncharacterized protein conserved in bacteria 8 2 Op 3 . + CDS 7808 - 8314 632 ## COG3685 Uncharacterized protein conserved in bacteria + Term 8338 - 8372 6.0 9 3 Tu 1 . - CDS 8374 - 8928 666 ## COG3047 Outer membrane protein W - Prom 9041 - 9100 7.0 + Prom 9060 - 9119 7.0 10 4 Op 1 . + CDS 9369 - 10112 581 ## ECP_1303 hypothetical protein 11 4 Op 2 9/0.000 + CDS 10142 - 10681 532 ## COG2917 Intracellular septation protein A + Term 10683 - 10724 5.5 + Prom 10698 - 10757 2.1 12 4 Op 3 . + CDS 10786 - 11184 328 ## COG1607 Acyl-CoA hydrolase + Term 11187 - 11228 11.3 - Term 11175 - 11216 11.3 13 5 Tu 1 . - CDS 11224 - 11943 574 ## COG0810 Periplasmic protein TonB, links inner and outer membranes - Prom 11975 - 12034 5.6 + Prom 11903 - 11962 2.3 14 6 Tu 1 . + CDS 12071 - 12463 302 ## COG2350 Uncharacterized protein conserved in bacteria + Term 12472 - 12528 5.1 + Prom 12677 - 12736 4.8 15 7 Tu 1 . + CDS 12807 - 14015 749 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component + Term 14040 - 14080 8.1 - Term 14028 - 14066 3.1 16 8 Tu 1 . - CDS 14070 - 14243 81 ## EC55989_1347 hypothetical protein - Prom 14268 - 14327 6.2 + Prom 14299 - 14358 7.8 17 9 Op 1 1/1.000 + CDS 14386 - 15846 1104 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 18 9 Op 2 . + CDS 15881 - 16210 481 ## COG3099 Uncharacterized protein conserved in bacteria + Term 16234 - 16265 4.1 - Term 16222 - 16253 4.1 19 10 Op 1 44/0.000 - CDS 16263 - 17267 853 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 20 10 Op 2 44/0.000 - CDS 17264 - 18277 582 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 21 10 Op 3 49/0.000 - CDS 18289 - 19197 913 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 22 10 Op 4 21/0.000 - CDS 19212 - 20132 815 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Term 20162 - 20214 11.1 23 10 Op 5 . - CDS 20218 - 21849 1706 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 21980 - 22039 4.2 + Prom 22136 - 22195 2.4 24 11 Tu 1 . + CDS 22268 - 22429 131 ## ECS88_1310 hypothetical protein + Term 22553 - 22582 0.4 - Term 22536 - 22574 4.6 25 12 Tu 1 . - CDS 22587 - 23234 475 ## COG2095 Multiple antibiotic transporter - Prom 23422 - 23481 6.9 26 13 Tu 1 . + CDS 23711 - 26386 3003 ## COG1454 Alcohol dehydrogenase, class IV + Prom 26416 - 26475 2.6 27 14 Op 1 . + CDS 26510 - 26695 141 ## ROD_08131 ISCro3 transposase 28 14 Op 2 . + CDS 26634 - 26864 62 ## EC55989_1335 hypothetical protein 29 14 Op 3 . + CDS 26901 - 27410 90 ## EC55989_1334 hypothetical protein - Term 27629 - 27677 8.1 30 15 Tu 1 . - CDS 27692 - 28309 333 ## COG1435 Thymidine kinase - Prom 28343 - 28402 5.6 + Prom 28819 - 28878 4.5 31 16 Tu 1 . + CDS 28915 - 29328 538 ## COG2916 DNA-binding protein H-NS + Term 29356 - 29384 3.0 - Term 29408 - 29449 8.8 32 17 Tu 1 . - CDS 29472 - 30380 987 ## COG1210 UDP-glucose pyrophosphorylase - Prom 30517 - 30576 4.9 - Term 30504 - 30538 -0.4 33 18 Op 1 4/0.625 - CDS 30582 - 31595 666 ## COG0784 FOG: CheY-like receiver - Term 31614 - 31643 -0.3 34 18 Op 2 . - CDS 31687 - 32592 386 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily - Prom 32842 - 32901 3.2 + Prom 32601 - 32660 3.8 35 19 Op 1 4/0.625 + CDS 32705 - 33163 200 ## PROTEIN SUPPORTED gi|90021194|ref|YP_527021.1| ribosomal protein L20 36 19 Op 2 . + CDS 33213 - 34055 937 ## COG0788 Formyltetrahydrofolate hydrolase + Term 34249 - 34317 26.1 + TRNA 34215 - 34299 66.9 # Tyr GTA 0 0 + TRNA 34334 - 34418 66.9 # Tyr GTA 0 0 37 20 Tu 1 . - CDS 34415 - 34597 94 ## ECO111_1559 hypothetical protein Predicted protein(s) >gi|299856416|gb|ADWV01000035.1| GENE 1 86 - 1648 1742 520 aa, chain + ## HITS:1 COG:ECs1836 KEGG:ns NR:ns ## COG: ECs1836 COG0147 # Protein_GI_number: 15831090 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Escherichia coli O157:H7 # 1 520 1 520 520 1027 99.0 0 MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADIDSKDDLKSLLLVDSALR ITALGDTVTIQALSGNGEALLTLLDNALPAGVENEQLPNCRVLRFPPVSPLLDEDARLCS LSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFEDLPQLSAENNCPDFCFYLAET LMVIDHQKKSTRIQASLFAPNEEEKQRLTARLNELRQQLTEAAPPLPVVSVPHMRCECNQ SDEEFGGVVRLLQKAIRAGEIFQVVPSRRFSLPCPSPLAAYYVLKKSNPSPYMFFMQDND FTLFGASPESSLKYDATSRQIEIYPIAGTRPRGRRADGSLDRDLDSRIELEMRTDHKELS EHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELRHDLDALHAYRAC MNMGTLSGAPKVRAMQLIAEAEGRRRGSYGGAVGYFTAHGDLDTCIVIRSALVENGIATV QAGAGVVLDSVPQSEADETRNKARAVLRAIATAHHAQETF >gi|299856416|gb|ADWV01000035.1| GENE 2 1648 - 3243 1578 531 aa, chain + ## HITS:1 COG:trpD_2 KEGG:ns NR:ns ## COG: trpD_2 COG0547 # Protein_GI_number: 16129224 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Escherichia coli K12 # 197 531 1 335 335 603 100.0 1e-172 MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERLATMSNPVLMLSPGPGV PSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMF AGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHDADRVCGFQFHPESILTTQGA RLLEQTLAWAQQKLEPANTLQPILEKLYQAQTLSQQESHQLFSAVVRGELKPEQLAAALV SMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAAC GLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHA MPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHSGG MDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQEQLAGGTPEENRDILTRLLQGKG DAAHEAAVAANVAMLMRLHGHEDLQANAQTVLEVLRSGSAYDRVTALAARG >gi|299856416|gb|ADWV01000035.1| GENE 3 3247 - 4605 1267 452 aa, chain + ## HITS:1 COG:ZtrpC_1 KEGG:ns NR:ns ## COG: ZtrpC_1 COG0134 # Protein_GI_number: 15801916 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Escherichia coli O157:H7 EDL933 # 1 253 2 254 254 498 98.0 1e-140 MQTVLAKIVADKAIWVETRKQQQPLASFQNEVQPSTRHFYDALQGARTAFILECKKASPS KGVIRDDFDPARIAAIYKHYASAISVLTDEKYFQGSFDFLPIVSQIAPQPILCKDFIIDP YQIYLARYYQADACLLMLSVLDDEQYRQLAAVAHSLEMGVLTEVSNEEELERAIALGAKV VGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHFANGFLIGSALM AHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVM AAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHGNEEQLYIDTLREALPAHVAIWKALS VGETLPAREFQHVDKYVLDNGQGGSGQRFDWSLLNGQSLGNVLLAGGLGADNCVEAAQTG CAGLDFNSAVESQPGIKDARLLASVFQTLRAY >gi|299856416|gb|ADWV01000035.1| GENE 4 4617 - 5810 1360 397 aa, chain + ## HITS:1 COG:trpB KEGG:ns NR:ns ## COG: trpB COG0133 # Protein_GI_number: 16129222 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Escherichia coli K12 # 1 397 1 397 397 796 100.0 0 MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQFNDLLKNYAGRPTALT KCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASA LASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGS YETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGM FADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEDGQIEESYSI SAGLDFPSVGPQHAYLNSTGRADYVSITDDEALEAFKTLCLHEGIIPALESSHALAHALK MMRENPDKEQLLVVNLSGRGDKDIFTVHDILKARGEI >gi|299856416|gb|ADWV01000035.1| GENE 5 5810 - 6616 391 268 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 249 1 248 263 155 35 4e-37 MERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLAD GPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMYANLVFNKGIDEFYAQCEK VGVDSVLVADVPIEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRA GVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKI IEQHINEPEKMLAALKVFVQPMKAATRS >gi|299856416|gb|ADWV01000035.1| GENE 6 6997 - 7176 212 59 aa, chain + ## HITS:1 COG:STM1728 KEGG:ns NR:ns ## COG: STM1728 COG3729 # Protein_GI_number: 16765072 # Func_class: R General function prediction only # Function: General stress protein # Organism: Salmonella typhimurium LT2 # 1 55 1 55 60 58 89.0 4e-09 MAEHRGGSGNFAEDREKASDAGRKGGQHSGGNFKNDPQRASEAGKKGGQQSGGNKSGKS >gi|299856416|gb|ADWV01000035.1| GENE 7 7262 - 7762 603 166 aa, chain + ## HITS:1 COG:ECs1830 KEGG:ns NR:ns ## COG: ECs1830 COG3685 # Protein_GI_number: 15831084 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 166 1 166 166 234 100.0 7e-62 MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQ VVESESNLKIKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTL ATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLALNNVNKKAENKA >gi|299856416|gb|ADWV01000035.1| GENE 8 7808 - 8314 632 168 aa, chain + ## HITS:1 COG:ECs1829 KEGG:ns NR:ns ## COG: ECs1829 COG3685 # Protein_GI_number: 15831083 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 168 1 168 168 308 99.0 3e-84 MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQHLSETKNQIVQLETIL DRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSISGYVFEQFEIACYTSLLAAAKN AGDTASIPTIEAILNEEKQMADWLIQHIPQTTEKFLIRSETDGVEAKK >gi|299856416|gb|ADWV01000035.1| GENE 9 8374 - 8928 666 184 aa, chain - ## HITS:1 COG:ompW KEGG:ns NR:ns ## COG: ompW COG3047 # Protein_GI_number: 16129217 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein W # Organism: Escherichia coli K12 # 1 184 29 212 212 358 100.0 3e-99 MRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGT RATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLS LKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSA GYRF >gi|299856416|gb|ADWV01000035.1| GENE 10 9369 - 10112 581 247 aa, chain + ## HITS:1 COG:no KEGG:ECP_1303 NR:ns ## KEGG: ECP_1303 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_536 # Pathway: not_defined # 1 247 1 247 247 352 99.0 8e-96 MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPSDAQLAQLNDGVPVSGS SGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVILIIQLVSAGQRVSALRAIG ASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLALAPVMLVQDKMGIFASMRSSM RLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEIGAVLANTLSNLISAILLIYLFR LYMLIRQ >gi|299856416|gb|ADWV01000035.1| GENE 11 10142 - 10681 532 179 aa, chain + ## HITS:1 COG:ECs1754 KEGG:ns NR:ns ## COG: ECs1754 COG2917 # Protein_GI_number: 15831008 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Intracellular septation protein A # Organism: Escherichia coli O157:H7 # 1 179 1 179 179 291 100.0 6e-79 MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRFRKVEKMALITFVLVVV FGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQRMLGKELTLPQPVWSKLN LAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLIFTLLSGIYIYRHMPQEDKS >gi|299856416|gb|ADWV01000035.1| GENE 12 10786 - 11184 328 132 aa, chain + ## HITS:1 COG:yciA KEGG:ns NR:ns ## COG: yciA COG1607 # Protein_GI_number: 16129214 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Escherichia coli K12 # 1 132 1 132 132 264 100.0 3e-71 MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVE GMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAV DPEGKPRALPVE >gi|299856416|gb|ADWV01000035.1| GENE 13 11224 - 11943 574 239 aa, chain - ## HITS:1 COG:ECs1752 KEGG:ns NR:ns ## COG: ECs1752 COG0810 # Protein_GI_number: 15831006 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Escherichia coli O157:H7 # 1 239 1 239 239 281 99.0 7e-76 MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVAPADLEPPQA VQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDIKPVESR PASPFENTAPARPTSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKF DVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGTTEIQ >gi|299856416|gb|ADWV01000035.1| GENE 14 12071 - 12463 302 130 aa, chain + ## HITS:1 COG:ECs1751 KEGG:ns NR:ns ## COG: ECs1751 COG2350 # Protein_GI_number: 15831005 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 130 1 130 130 253 100.0 4e-68 MHGLNKDIIFPLQIFALSNNVLYNFPEQGVVPVLYVIYAQDKADSLEKRLSVRPAHLARL QLLHDEGRLLTAGPMPAVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPYVAAGVYEH VSVKPFKKVF >gi|299856416|gb|ADWV01000035.1| GENE 15 12807 - 14015 749 402 aa, chain + ## HITS:1 COG:ECs1750 KEGG:ns NR:ns ## COG: ECs1750 COG1226 # Protein_GI_number: 15831004 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Escherichia coli O157:H7 # 1 402 16 417 417 725 99.0 0 MTLRHDILALAVFLNGLLIFKTIYGMSVNLLDIFHIKAFSELDLSLLANAPLFMLGVFLV LNSIGLLFRAKLAWAISIILLLIALIYTLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSS AAAGTIFAFISFTTLLFYSTYGALYLSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVS ESARLFTISVIISGITVFATSMTSIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILA INTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAI LALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILAR VLNGEEINNDMLVSMLLNSGHGIFSDNDEQETKADSKESVQK >gi|299856416|gb|ADWV01000035.1| GENE 16 14070 - 14243 81 57 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1347 NR:ns ## KEGG: EC55989_1347 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 57 38 94 94 83 100.0 3e-15 MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILNKQRNSLLFAIYNI >gi|299856416|gb|ADWV01000035.1| GENE 17 14386 - 15846 1104 486 aa, chain + ## HITS:1 COG:cls KEGG:ns NR:ns ## COG: cls COG1502 # Protein_GI_number: 16129210 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Escherichia coli K12 # 1 486 1 486 486 978 100.0 0 MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGE LHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQ LQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLD SAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSM NMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPF EQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQR GVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTV NLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFY FFSPLL >gi|299856416|gb|ADWV01000035.1| GENE 18 15881 - 16210 481 109 aa, chain + ## HITS:1 COG:yciU KEGG:ns NR:ns ## COG: yciU COG3099 # Protein_GI_number: 16129209 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 109 27 135 135 201 100.0 2e-52 MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPAEDWQEH VDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKLCHIIWRE >gi|299856416|gb|ADWV01000035.1| GENE 19 16263 - 17267 853 334 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 329 1 325 329 333 51 1e-90 MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESG CGKSTFARAIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSDIQMIFQDPLASLNPRMTI GEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALI LEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL GHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLEKNKTIQLLEGELPSPINPPSGCVF RTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL >gi|299856416|gb|ADWV01000035.1| GENE 20 17264 - 18277 582 337 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 12 317 4 311 329 228 40 3e-59 MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGS GKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPY MRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIA MALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVL VMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCP FQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVEELL >gi|299856416|gb|ADWV01000035.1| GENE 21 18289 - 19197 913 302 aa, chain - ## HITS:1 COG:STM1744 KEGG:ns NR:ns ## COG: STM1744 COG1173 # Protein_GI_number: 16765088 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 302 1 302 302 509 96.0 1e-144 MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVASLIVLVLIALFVILAPMLS QFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVVVGT LYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA RIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNVLGVVVVYASLLVPSMILFESFL SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPK DR >gi|299856416|gb|ADWV01000035.1| GENE 22 19212 - 20132 815 306 aa, chain - ## HITS:1 COG:ECs1744 KEGG:ns NR:ns ## COG: ECs1744 COG0601 # Protein_GI_number: 15830998 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 306 1 306 306 549 100.0 1e-156 MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIM TQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAA LKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVA LSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAF VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVI DPKIRY >gi|299856416|gb|ADWV01000035.1| GENE 23 20218 - 21849 1706 543 aa, chain - ## HITS:1 COG:ECs1743 KEGG:ns NR:ns ## COG: ECs1743 COG4166 # Protein_GI_number: 15830997 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 1 543 1 543 543 1082 100.0 0 MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRNNGSEVQSLDPHKIEGV PESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHLRKDAKWSDGTPVTAQDFV YSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDLGVKAIDDHTLEVTLSEPVPY FYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVLERSPTYWNNA KTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPDEVHVDPYLCTYY YEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKAQGDMPAYGYTPPYTDGAKLTQPEWFG WSQEKRNEEAKKLLAEAGYTADKPLTINLLYNTSDLHKKLAIAASSLWKKNIGVNVKLVN QEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETL KVTDEAQRTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNTYTRNMYI VKH >gi|299856416|gb|ADWV01000035.1| GENE 24 22268 - 22429 131 53 aa, chain + ## HITS:1 COG:no KEGG:ECS88_1310 NR:ns ## KEGG: ECS88_1310 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_S88 # Pathway: not_defined # 12 53 63 104 104 76 100.0 2e-13 MSIFSDYSSSSEMHNNLTIDYYLALSSTKGSGITNIISIILQQAQDYDVAKIT >gi|299856416|gb|ADWV01000035.1| GENE 25 22587 - 23234 475 215 aa, chain - ## HITS:1 COG:ychE KEGG:ns NR:ns ## COG: ychE COG2095 # Protein_GI_number: 16129203 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Escherichia coli K12 # 1 215 1 215 215 377 100.0 1e-105 MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWI SLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGV VPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQ TGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN >gi|299856416|gb|ADWV01000035.1| GENE 26 23711 - 26386 3003 891 aa, chain + ## HITS:1 COG:ECs1741_2 KEGG:ns NR:ns ## COG: ECs1741_2 COG1454 # Protein_GI_number: 15830995 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 448 872 1 425 444 860 100.0 0 MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMG IVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTA IFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNA LMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTF DNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQGKELKAVQDVILKNGALNAAIVGQP AYKIAELAGFSVPENTKILIGEVTVVDESEPFAHEKLSPTLAMYRAKDFEDAVEKAEKLV AMGGIGHTSCLYTDQDNQPARVSYFGQKMKTARILINTPASQGGIGDLYNFKLAPSLTLG CGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHK RALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLSIVRKGAELANSFKPDVI IALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSG TGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAME AYVSVLASEFSDGQALQALKLLKEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLG VCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIAD HLGLSAPGDRTAAKIEKLLAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQ CTGANPRYPLISELKQILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA >gi|299856416|gb|ADWV01000035.1| GENE 27 26510 - 26695 141 61 aa, chain + ## HITS:1 COG:no KEGG:ROD_08131 NR:ns ## KEGG: ROD_08131 # Name: not_defined # Def: ISCro3 transposase # Organism: C.rodentium # Pathway: not_defined # 1 60 1 60 445 126 96.0 2e-28 MPLLNDLLDFSDHPLMPPPSAQLFAEHLPTEWIQHCLTLSAHATVRRRRLPGDMVIWMVV Q >gi|299856416|gb|ADWV01000035.1| GENE 28 26634 - 26864 62 76 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1335 NR:ns ## KEGG: EC55989_1335 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 76 1 76 76 133 100.0 2e-30 MRPFAAVVYRGTWLSGWWCNEPITDVVRRLNLSADGEAGMNLLARSAVTQARQRVGAAPV EWLFRQTAQTGARNVT >gi|299856416|gb|ADWV01000035.1| GENE 29 26901 - 27410 90 169 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1334 NR:ns ## KEGG: EC55989_1334 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 169 12 180 180 323 100.0 1e-87 MAHSSGHLTDKPELREYYGSANTSTKRQNAYPVMRLVALMNLGSHILLNAVTAPYRQSET VLAHSMLATIPDNSITLFDKLFYSEDLLLTLNQKGCNRHWLLPAWKNIASEMIELGNTAS PGTIPKRLEHLQGALEVVFITKRPRPSRPRSVKISKTRYPVKHSAAPLK >gi|299856416|gb|ADWV01000035.1| GENE 30 27692 - 28309 333 205 aa, chain - ## HITS:1 COG:ECs1740 KEGG:ns NR:ns ## COG: ECs1740 COG1435 # Protein_GI_number: 15830994 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 407 100.0 1e-114 MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAK LFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSEVVDQLDIPVLCYGLRTDF RGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQAGRPYNEGEQVVIGGNERYVS VCRKHYKEALQVGSLTAIQERHRHD >gi|299856416|gb|ADWV01000035.1| GENE 31 28915 - 29328 538 137 aa, chain + ## HITS:1 COG:ECs1739 KEGG:ns NR:ns ## COG: ECs1739 COG2916 # Protein_GI_number: 15830993 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Escherichia coli O157:H7 # 1 137 1 137 137 197 100.0 4e-51 MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQ YREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIK KAMDEQGKSLDDFLIKQ >gi|299856416|gb|ADWV01000035.1| GENE 32 29472 - 30380 987 302 aa, chain - ## HITS:1 COG:ECs1738 KEGG:ns NR:ns ## COG: ECs1738 COG1210 # Protein_GI_number: 15830992 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Escherichia coli O157:H7 # 1 302 1 302 302 589 100.0 1e-168 MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLV THSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVL CAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGHSQIMVEPVADVTAYGV VDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTPPGAGDEIQ LTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNTLGTEFKAWLEEEMGI KK >gi|299856416|gb|ADWV01000035.1| GENE 33 30582 - 31595 666 337 aa, chain - ## HITS:1 COG:STM1753_1 KEGG:ns NR:ns ## COG: STM1753_1 COG0784 # Protein_GI_number: 16765097 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Salmonella typhimurium LT2 # 1 134 1 134 134 248 91.0 2e-65 MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIA MPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMV FACLYPSMFNSRVEEEERLFRDWDAMVDNPAAAAKLLQELQPPVQQVISHCRVNYRQLVA ADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALLLRALFNGLLQEQLAHQNQRLPE LGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQVQISNGVP LGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLMLSAE >gi|299856416|gb|ADWV01000035.1| GENE 34 31687 - 32592 386 301 aa, chain - ## HITS:1 COG:rssA KEGG:ns NR:ns ## COG: rssA COG1752 # Protein_GI_number: 16129195 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Escherichia coli K12 # 1 301 14 314 314 608 100.0 1e-174 MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALED WVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEIENCSRRFAAVATNLSTGR ELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVNPIPISLTRALGADIVIAVDL QHDAHLMQQDLLSFNVSEENSENGDSLPWHARLKERLGSITTRRAVTAPTATEIMTTSIQ VLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVERKMDELLPLVRTN I >gi|299856416|gb|ADWV01000035.1| GENE 35 32705 - 33163 200 152 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90021194|ref|YP_527021.1| ribosomal protein L20 [Saccharophagus degradans 2-40] # 4 127 3 131 134 81 37 6e-15 MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAA ALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENG QWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ >gi|299856416|gb|ADWV01000035.1| GENE 36 33213 - 34055 937 280 aa, chain + ## HITS:1 COG:purU KEGG:ns NR:ns ## COG: purU COG0788 # Protein_GI_number: 16129193 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate hydrolase # Organism: Escherichia coli K12 # 1 280 1 280 280 563 99.0 1e-161 MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFND STLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIGN HDTLRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVVLAKYMRVLTPEFVAR FPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHT YTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNRTIIL >gi|299856416|gb|ADWV01000035.1| GENE 37 34415 - 34597 94 60 aa, chain - ## HITS:1 COG:no KEGG:ECO111_1559 NR:ns ## KEGG: ECO111_1559 # Name: ychS # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 59 1 59 110 107 100.0 1e-22 MVVGEGLLNAARFALRVVACGNALSLALESNLGRGFSSFPAWAEYLIADSFESSRTFESG Prediction of potential genes in microbial genomes Time: Sun May 15 15:55:01 2011 Seq name: gi|299856415|gb|ADWV01000036.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont35.1, whole genome shotgun sequence Length of sequence - 33733 bp Number of predicted genes - 27, with homology - 27 Number of transcription units - 22, operones - 3 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 5/0.200 - CDS 1 - 196 125 ## COG3187 Heat shock protein - Prom 223 - 282 4.7 2 2 Tu 1 . - CDS 307 - 1296 1310 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 1336 - 1395 8.5 + Prom 1302 - 1361 4.4 3 3 Op 1 . + CDS 1504 - 4143 2178 ## ECIAI1_1381 hypothetical protein 4 3 Op 2 . + CDS 4140 - 4325 263 ## LF82_3556 uncharacterized protein YnbE 5 3 Op 3 . + CDS 4285 - 4659 264 ## COG3784 Uncharacterized protein conserved in bacteria + Term 4786 - 4851 14.2 - Term 4788 - 4826 6.2 6 4 Tu 1 . - CDS 4831 - 5736 522 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 5803 - 5862 4.1 + Prom 5806 - 5865 4.2 7 5 Tu 1 . + CDS 5972 - 7471 1165 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 7488 - 7528 4.3 - Term 7484 - 7510 1.0 8 6 Tu 1 . - CDS 7530 - 9803 2394 ## COG3733 Cu2+-containing amine oxidase - Prom 9966 - 10025 3.4 - Term 9992 - 10047 6.7 9 7 Tu 1 . - CDS 10051 - 10239 57 ## COG2030 Acyl dehydratase - Prom 10295 - 10354 2.5 + Prom 9932 - 9991 5.9 10 8 Op 1 1/0.700 + CDS 10238 - 10597 274 ## COG3327 Phenylacetic acid-responsive transcriptional repressor 11 8 Op 2 . + CDS 10579 - 11169 639 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily + Term 11215 - 11252 5.2 + Prom 11225 - 11284 5.2 12 9 Tu 1 . + CDS 11400 - 12260 789 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Term 12269 - 12308 6.2 + Prom 12375 - 12434 4.7 13 10 Tu 1 . + CDS 12588 - 14630 955 ## ECIAI1_1402 hypothetical protein + Term 14662 - 14714 0.7 + Prom 14660 - 14719 4.3 14 11 Tu 1 4/0.300 + CDS 14939 - 15406 221 ## COG0558 Phosphatidylglycerophosphate synthase + Term 15431 - 15478 5.0 + Prom 15678 - 15737 4.5 15 12 Op 1 3/0.500 + CDS 15778 - 16302 191 ## COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase 16 12 Op 2 5/0.200 + CDS 16318 - 18075 1115 ## COG0500 SAM-dependent methyltransferases 17 12 Op 3 . + CDS 18089 - 19381 519 ## COG0671 Membrane-associated phospholipid phosphatase + Term 19429 - 19473 4.1 - Term 19371 - 19423 2.6 18 13 Tu 1 . - CDS 19432 - 20037 739 ## COG1182 Acyl carrier protein phosphodiesterase - Prom 20187 - 20246 4.0 + Prom 20143 - 20202 3.0 19 14 Tu 1 . + CDS 20238 - 24140 4401 ## COG1643 HrpA-like helicases + Prom 24174 - 24233 6.5 20 15 Tu 1 3/0.500 + CDS 24412 - 25212 531 ## COG1434 Uncharacterized conserved protein + Prom 25241 - 25300 5.0 21 16 Tu 1 . + CDS 25409 - 26848 1394 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 27077 - 27116 -0.0 - Term 26848 - 26881 4.4 22 17 Tu 1 . - CDS 26890 - 27891 1183 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 28037 - 28096 5.2 + Prom 27996 - 28055 2.3 23 18 Tu 1 . + CDS 28080 - 28610 294 ## COG3038 Cytochrome B561 + Prom 28672 - 28731 6.0 24 19 Tu 1 . + CDS 28855 - 29028 128 ## SSON_1723 hypothetical protein + Term 29237 - 29265 -0.9 + Prom 29505 - 29564 5.5 25 20 Tu 1 . + CDS 29648 - 31288 1038 ## COG0840 Methyl-accepting chemotaxis protein + Term 31446 - 31487 -0.7 26 21 Tu 1 . - CDS 31326 - 32249 509 ## COG0583 Transcriptional regulator - Prom 32294 - 32353 4.5 + Prom 32269 - 32328 4.4 27 22 Tu 1 . + CDS 32466 - 33732 901 ## COG5383 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|299856415|gb|ADWV01000036.1| GENE 1 1 - 196 125 65 aa, chain - ## HITS:1 COG:hslJ KEGG:ns NR:ns ## COG: hslJ COG3187 # Protein_GI_number: 16129340 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Heat shock protein # Organism: Escherichia coli K12 # 1 65 1 65 140 127 100.0 6e-30 MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKPVTSDKNPPEISFGEKM MISGS >gi|299856415|gb|ADWV01000036.1| GENE 2 307 - 1296 1310 329 aa, chain - ## HITS:1 COG:ECs2002 KEGG:ns NR:ns ## COG: ECs2002 COG1052 # Protein_GI_number: 15831256 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Escherichia coli O157:H7 # 1 329 1 329 329 669 100.0 0 MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANGCEAVCIFVNDDGSRPV LEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDPEAVAEHAIGMMMTLNRRI HRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAMLRILKGFGMRLLAFDPYPSAA ALELGVEYVDLPTLFSESDVISLHCPLTPENYHLLNEAAFDQMKNGVMIVNTSRGALIDS QAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVIQDDVFRRLSACHNVLFTGHQAFLT AEALTSISQTTLQNLSNLEKGETCPNELV >gi|299856415|gb|ADWV01000036.1| GENE 3 1504 - 4143 2178 879 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_1381 NR:ns ## KEGG: ECIAI1_1381 # Name: ydbH # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 879 1 879 879 1690 99.0 0 MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRIALDESPRITRKGLIIP DLRYLVGDCQLAHITNASLSHPSRWLLNVGTVELDSACLAKLPQTEQSPAAPKTLAQWQS MLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGEKVKFQGQLKGQQLTVSELDV VAFENQPPVKLVGEFTMPLVPDGLPVSGHATATLNLPQEPSLVDAELDWQENSGQLIVLA RDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLSGRLGVKVDNWQAGLENALVSGRLS VLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTGEAKQADLILYARLPAQLSGSLTDPTL AFEPGALLRSKGRVIDSLDIDEIRWPLAGVKVTQRGVDGRLQAILQAHENELGDFVLHMD GLANDFLPDAGRWQWRYWGKGSFTPMNATWDVAGKGEWHDSTITLTDLSTGFDQLQYGTM TVEKPRLILDKPVVWVRDAQHPSFSGALSLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYF LFKGDLHAGEIGPVRVNGRWDGIRLRGNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQV AFSAAPEQGFRAGGHGVLKGGSAWMPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAE VINLVTAKNITADLQGRYPWAEEEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNL SSSELVSAVNPKQFAMSGAFSGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVK DNMTAGSAINWLRYMEISRSSTKINLDNLGLLTMQANITGTSRVDGKSGTVNLNYYHEEN IFTLWRSLRFGDNLQAWLEQNARLPGNDCPQGKECEEKQ >gi|299856415|gb|ADWV01000036.1| GENE 4 4140 - 4325 263 61 aa, chain + ## HITS:1 COG:no KEGG:LF82_3556 NR:ns ## KEGG: LF82_3556 # Name: ynbE # Def: uncharacterized protein YnbE # Organism: E.coli_LF82 # Pathway: not_defined # 1 61 1 61 61 96 96.0 2e-19 MKILLAALTSSFMLAACTPRIEVAAPKEPITINMNVKIEHEIIIKADKDVEELLETRSDL F >gi|299856415|gb|ADWV01000036.1| GENE 5 4285 - 4659 264 124 aa, chain + ## HITS:1 COG:ydbL KEGG:ns NR:ns ## COG: ydbL COG3784 # Protein_GI_number: 16129344 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 16 124 2 110 110 199 99.0 2e-51 MSKSCLKLVAIFSEAMMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVAL KTDAETEKLVTDINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKW VRKF >gi|299856415|gb|ADWV01000036.1| GENE 6 4831 - 5736 522 301 aa, chain - ## HITS:1 COG:feaR KEGG:ns NR:ns ## COG: feaR COG2207 # Protein_GI_number: 16129345 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 301 1 301 301 607 98.0 1e-174 MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLETHFAKGLKLSTVTTNGVNLYRTW QEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLL LPRTLLEQYFPHQKPVCAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLL RPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLV VAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF R >gi|299856415|gb|ADWV01000036.1| GENE 7 5972 - 7471 1165 499 aa, chain + ## HITS:1 COG:feaB KEGG:ns NR:ns ## COG: feaB COG1012 # Protein_GI_number: 16129346 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 1 499 2 500 500 987 99.0 0 MTEPHVAVLSQVQQFLDRQHGLYIDGRPGPAQSEKRLAIFDPATGQEIASTADANEADVD NAVMSAWRAFVSRRWAGRLPAERERILLRFADLVEQHSEELAQLETLEQGKSIAISRAFE VGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTRKEPVGVVAGIVPWNFPLMIG MWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSH PHVAKISFTGSTATGKGIARTAADRLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSFL NQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQVGPGMSPVAQINPLVSRAHCDKVCSF LDDAQAQQAELIRGLNGPAGEGYYVAPTLVVNPDAKLRLTREEVFGPVVNLVRVADGEEA LQLANDTEYGLTASVWTQNLSQALEYSDRLQAGTVWVNSHTLIDANLPFGGMKQSGTGRD FGPDWLDSWRETKSVCVRY >gi|299856415|gb|ADWV01000036.1| GENE 8 7530 - 9803 2394 757 aa, chain - ## HITS:1 COG:tynA KEGG:ns NR:ns ## COG: tynA COG3733 # Protein_GI_number: 16129347 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Cu2+-containing amine oxidase # Organism: Escherichia coli K12 # 1 757 1 757 757 1536 99.0 0 MGSPSLYSARKTALALAVALSFAWQAPVFAHGGEAHMVPMDETLKEFGADVQWDDYAQIF TLIKDGAYVKVKPGAQTAIVNGQPLALQVPVVMKDNKAWVSDTFINDVFQSGLDQTFQVE KRPHPLNALTADEIKQAVEIVKASADFKPNTRFTEISLLPPDKEAVWAFALENKPVDQPR KADVIMLDGKHIIEAVVDLQNNKLLSWQPIKDAHGMVLLDDFASVQNIINNSEEFAAAVK KRGITDAKKVITTPLTVGYFDGKDGLKQDARLLKVISYLDVGDGNYWAHPIENLVAVVDL EQKKIVKIEEGPVVPVPMTARPFDGRDRVAPAVKPMQIIEPEGKNYTITGDMIHWRNWDF HLSMNSRVGPMISTVTYNDNGTKRKVMYEGSLGGMIVPYGDPDIGWYFKAYLDSGDYGMG TLTSPIARGKDAPSNAVLLNETIADYTGVPMEIPRAIAVFERYAGPEYKHQEMGQPNVST ERRELVVRWISTVGNYDYIFDWIFHENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTR YGTLIDHNIVGTTHQHIYNFRLDLDVDGENNSLVAMDPVVKPNTAGGPRTSTMQVNQYNI GNEQDAAQKFDPGTIRLLSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHR LSFMDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHV ARAEEWPIMPTEWVHTLLKPWNFFDETPTLGALKKDK >gi|299856415|gb|ADWV01000036.1| GENE 9 10051 - 10239 57 62 aa, chain - ## HITS:1 COG:maoC_2 KEGG:ns NR:ns ## COG: maoC_2 COG2030 # Protein_GI_number: 16129348 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Escherichia coli K12 # 6 62 128 181 181 67 56.0 5e-12 MAFCSVKCQHSSTLARSAARESASGICASKQITLEVFNQHQTPVALYSILTLVARQHGDF VD >gi|299856415|gb|ADWV01000036.1| GENE 10 10238 - 10597 274 119 aa, chain + ## HITS:1 COG:paaX KEGG:ns NR:ns ## COG: paaX COG3327 # Protein_GI_number: 16129360 # Func_class: K Transcription # Function: Phenylacetic acid-responsive transcriptional repressor # Organism: Escherichia coli K12 # 1 119 198 316 316 242 98.0 2e-64 MYETFIQSFRPLVPLLKEAADELTPERAFHIQLLLIHFYRRVVLKDPLLPEELLPAHWAG HTARQLCINIYQRVAPAALAFVSEKGETSVGELPAPGSLYFQRFGGLNIEQEAICQFTR >gi|299856415|gb|ADWV01000036.1| GENE 11 10579 - 11169 639 196 aa, chain + ## HITS:1 COG:paaY KEGG:ns NR:ns ## COG: paaY COG0663 # Protein_GI_number: 16129361 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli K12 # 1 196 1 196 196 388 98.0 1e-108 MPIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQD NCVMHGFPEQDTVVEEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAF VKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQVLVTRCKQTLHQVEPLREVE PNRKRLVFDENLRPKQ >gi|299856415|gb|ADWV01000036.1| GENE 12 11400 - 12260 789 286 aa, chain + ## HITS:1 COG:ECs2008 KEGG:ns NR:ns ## COG: ECs2008 COG0667 # Protein_GI_number: 15831262 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 1 286 1 286 286 557 98.0 1e-158 MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYG PHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVL DVVNLRIMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVC VQNEYNIAHRADDAMIDALARDGIAYVPFFPLGGFTPLQSSTLSDVAASLGATPMQVALA WLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEVLSTLDGISRE >gi|299856415|gb|ADWV01000036.1| GENE 13 12588 - 14630 955 680 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_1402 NR:ns ## KEGG: ECIAI1_1402 # Name: ydbD # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 680 89 768 768 1330 99.0 0 MIVLGNLTVKGNISTFSLSNPWVILGNVTATNIVTDSPLLITGSINASGLVFIDSYYDNP STIKGSINARGIFINDIIAPVVASSTNSEFMVRASDKNDTENVKKALMIINPDAYYWGLI NDEDALKEIFKRSNIRMAGNVCNQMKKEALFRPKPSPELVQELQMLDEGNVAAFEGRDIA TFDLAIMRTLPRLKGISANLRKQLINSNDEQTIESMARYMPDNEILELTDQQLGYQPVVL GLLDREPLSVEIMTRMSRLPDGVGPLNLALRENLPLDIVMTLAKRDWDMIIQELYKDAWL LPESIIDGYIRSDDSSIRQVGAGGQLTYNQAMQLANDSSNNVVTSLAFKLAEMKHHGQLL RMTPQESDKVAAYLYQKFENDDDLIRVLFLALPDNLQFNFVKRMEKKSPAYFCCRDMQVI HSDAALQRLLTRFNDPEGWSNLAKNQYLSTSMKQKIWQRALTHRKNNPKADSAAYETSAD MILSELISHGEVDDQMLLNATALIRLEDWDFLESALVSWDNLPAVVLKELQQNTPRNDIW AKFFLRQENSSRAQVDEALRVYYALDPDALAQLDVLAKQPDRIWWSTLAKSNLTFFKFGA LNNRHTPPAVLAAEIDPEWWIVAMNNPRFPVDVLKARLKRDPLLALELVNPELDLVRQLA LNGKTRAIREQAMRKLDELY >gi|299856415|gb|ADWV01000036.1| GENE 14 14939 - 15406 221 155 aa, chain + ## HITS:1 COG:ynbA KEGG:ns NR:ns ## COG: ynbA COG0558 # Protein_GI_number: 16129369 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Escherichia coli K12 # 5 154 53 202 203 267 98.0 5e-72 MLVAQPILFMLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFL FLPESNASLVILMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGLAVAIYP QWMQWNNLLWSIASILLLWTAINRCRSVLLMRAER >gi|299856415|gb|ADWV01000036.1| GENE 15 15778 - 16302 191 174 aa, chain + ## HITS:1 COG:ynbB KEGG:ns NR:ns ## COG: ynbB COG4589 # Protein_GI_number: 16129370 # Func_class: R General function prediction only # Function: Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase # Organism: Escherichia coli K12 # 1 174 125 298 298 303 98.0 8e-83 MGDPSGFLHTVSAIFWGWIMTVFALSHAAWLLMLPTTNIQGGALLVLFLLALTESNDIAQ YLWGKSCGRRKVVPKVSPGKTLEGLVGGVITTMIASLIIGPLLTPLNTLQALLAGLLIGI SGFCGDVVMSAIKRDIGVKDSGKLLPGHGGLLDRIDSLIFTAPVFFYFIRYCCY >gi|299856415|gb|ADWV01000036.1| GENE 16 16318 - 18075 1115 585 aa, chain + ## HITS:1 COG:ynbC_2 KEGG:ns NR:ns ## COG: ynbC_2 COG0500 # Protein_GI_number: 16129371 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 275 585 1 311 311 633 98.0 0 MENSRIHGEHFFTSSDNTALFYRHWPALQPGAKKVIVLFHRGHEHSGRLQHLVDELAMPD TVFYAWDARGHGQTSGPRGYSPSLARSVQDVDEFVRFAASDSQVGLDEVVVIAQSVGAVL VATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDR QRVASFNNDPLITRAIAVNILLDLYKTSERIIRDAAAITLPTQLLISGDDYVVHRQPQID FYQRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGP SADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFGAHSAGLHLGMSTGFDSGSSLDYVYQNQ PQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAGHGR YVLDALANEPAVSDILLRDYSELNVAQGQAMIAQRGMSGRVRFEQGDAFNPEELSALTPR PTLAIVSGLYELFPENEQVKNSLAGLANAIEPGGILIYTGQPWHPQLEMIAGVLTSHKDG KPWVMRVRSQGEMDSLVRDAGFDKCTQRIDEWGIFTVSMAVRRDN >gi|299856415|gb|ADWV01000036.1| GENE 17 18089 - 19381 519 430 aa, chain + ## HITS:1 COG:ynbD_1 KEGG:ns NR:ns ## COG: ynbD_1 COG0671 # Protein_GI_number: 16129372 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Escherichia coli K12 # 1 342 1 342 342 643 99.0 0 MLQGAGWLLLLAPFFFFTYGSLNQFTAVQDLNSHDIPSQVFGWETAIPFLPWTIVPYWSL DLLYGFSLFVCSTTFEQRRLVHRLILATVMACCGFLLYPLKFSFIRPEVSGVTGWLFSQL ELFDLPYNQSPSLHIILCWLLWRHFRQHLAERWRKVCGGWFLLIAISTLTTWQHHFIDVI TGLAVGMLIDWMVPVDRRWNYQKPDQRRIKIALPYVVGAGSCIVLMELMVMIQLWWSVWL CWPVLSLLIIGRGYGGLGAITTGKDSQGKLPPAVYWLTLPWRIGMWLSMRWFCRRLEPVS KITAGVYLGAFPRHIPAQNAVLDVTFEFPRGRATKDRLYFCVPMLDLVVPEEGELRQAVA MLETLREEQGSVLVHCALGLSRSALVVAAWLLCYGHCKTVNEAISYIRARRPQIVLTDEH KAMLKLWENR >gi|299856415|gb|ADWV01000036.1| GENE 18 19432 - 20037 739 201 aa, chain - ## HITS:1 COG:acpD KEGG:ns NR:ns ## COG: acpD COG1182 # Protein_GI_number: 16129373 # Func_class: I Lipid transport and metabolism # Function: Acyl carrier protein phosphodiesterase # Organism: Escherichia coli K12 # 1 201 1 201 201 384 99.0 1e-107 MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALR PSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFR YTENGPEGLITGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYG PEMAAKAQSDAKAAIDSIVAA >gi|299856415|gb|ADWV01000036.1| GENE 19 20238 - 24140 4401 1300 aa, chain + ## HITS:1 COG:ECs2015 KEGG:ns NR:ns ## COG: ECs2015 COG1643 # Protein_GI_number: 15831269 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Escherichia coli O157:H7 # 20 1300 1 1281 1281 2540 99.0 0 MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGK VLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRG IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGE REIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGI KYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ ASAYKLTALGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQ LRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL FKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATE KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELE HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGA EKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRR ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDW HWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPS PIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEK VRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTG NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDED VKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG >gi|299856415|gb|ADWV01000036.1| GENE 20 24412 - 25212 531 266 aa, chain + ## HITS:1 COG:ydcF KEGG:ns NR:ns ## COG: ydcF COG1434 # Protein_GI_number: 16129375 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 266 1 266 266 547 99.0 1e-156 MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAGNAVMPTIDAACKIARD QQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATILADIAHQFWHIPHEKIWIE DQSTNCGENARFSIALLKQAVERVHTAIVVQDPTMQRRTMATFRRMTGDNPDAPRWLSYP GFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHVDFP AEVIHAWQTLKHDAVLIEAMESRSLR >gi|299856415|gb|ADWV01000036.1| GENE 21 25409 - 26848 1394 479 aa, chain + ## HITS:1 COG:ECs2021 KEGG:ns NR:ns ## COG: ECs2021 COG1012 # Protein_GI_number: 15831275 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 1 479 1 479 479 944 99.0 0 MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEW EALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWAR RYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEF TPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAT AAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQ FVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEG KGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNL NVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS >gi|299856415|gb|ADWV01000036.1| GENE 22 26890 - 27891 1183 333 aa, chain - ## HITS:1 COG:ECs2022 KEGG:ns NR:ns ## COG: ECs2022 COG0057 # Protein_GI_number: 15831276 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 333 1 333 333 641 99.0 0 MSKVGINGFGRIGRLVLRRLLEVKSNIDVVAINDLTSPKILAYLLKHDSNYGPFPWSVDF TEDSLIVDGKSIAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLIS APAGEMKTIVYNVNDDTLDGNDTIVSVASCTTNCLAPMAKALHDSFGIEVGTMTTIHAYT GTQSLVDGPRGKDLRASRAAAENIIPHTTGAAKAIGLVIPELSGKLKGHAQRVPVKTGSV TELVSILGKKVTAEEVNNALKQATTNNESFGYTDEEIVSSDIIGSHFGSVFDATQTEITA VGDLQLVKTVAWYDNEYGFVTQLIRTLEKFAKL >gi|299856415|gb|ADWV01000036.1| GENE 23 28080 - 28610 294 176 aa, chain + ## HITS:1 COG:STM1639 KEGG:ns NR:ns ## COG: STM1639 COG3038 # Protein_GI_number: 16764983 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Salmonella typhimurium LT2 # 1 175 1 175 176 281 84.0 3e-76 MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMVHVSCGISILVLMVVRL LLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGLVMMYNRGNPWFAFGLTMP YASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHYFWKDNTLLRMMPRKRS >gi|299856415|gb|ADWV01000036.1| GENE 24 28855 - 29028 128 57 aa, chain + ## HITS:1 COG:no KEGG:SSON_1723 NR:ns ## KEGG: SSON_1723 # Name: ydcA # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 57 1 57 57 92 100.0 4e-18 MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCNDGSISASKKTCTN >gi|299856415|gb|ADWV01000036.1| GENE 25 29648 - 31288 1038 546 aa, chain + ## HITS:1 COG:trg KEGG:ns NR:ns ## COG: trg COG0840 # Protein_GI_number: 16129380 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli K12 # 1 546 1 546 546 899 100.0 0 MNTTPSQRLGFLHHIRLVPLFACILGGILVLFALSSALAGYFLWQADRDQRDVTAEIEIR TGLANSSDFLRSARINMIQAGAASRIAEMEAMKRNIAQAESEIKQSQQGYRAYQNRPVKT PADEALDTELNQRFQAYITGMQPMLKYAKNGMFEAIINHESEQIRPLDNAYTDILNKAVK IRSTRANQLAELAHQRTRLGGMFMIGAFVLALVMTLITFMVLRRIVIRPLQHAAQRIEKI ASGDLTMNDEPAGRNEIGRLSRHLQQMQHSLGMTVGTVRQGAEEIYRGTSEISAGNADLS SRTEEQAAAIEQTAASMEQLTATVKQNADNAHHASKLAQEASIKASDGGQTVSGVVKTMG AISTSSKKISEITAVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLASRSAQ AAKEIEGLISESVRLIDLGSDEVATAGKTMSTIVDAVASVTHIMQEIAAASDEQSRGITQ VSQAISEMDKVTQQNASLVEEASAAAVSLEEQAARLTEAVDVFRLHKHSVSAEPRGAGEP VSFATV >gi|299856415|gb|ADWV01000036.1| GENE 26 31326 - 32249 509 307 aa, chain - ## HITS:1 COG:ydcI KEGG:ns NR:ns ## COG: ydcI COG0583 # Protein_GI_number: 16129381 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 307 48 354 354 595 99.0 1e-170 MEKNSLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGARLFER GRQGAQLTLPGEQFLTHAVRVLDAINTAGQSLHRKEDLNNDVVRVGALPTAALGILPSVI GQFHQQQKETTLQVATMSNPMILAGLKTGEIDIGIGRMSDPELMTGLNYELLFLESLKLV VRPNHPLLQENVTLSRVLEWPVVVSPEGTAPRQHSDALVQSQGCKIPSGCIETLSASLSR QLTVEYDYVWFVPSGAVKDDLRHATLVALPVPGHGAGEPIGILTRVDATFSSGCQLMINA IRKSMPF >gi|299856415|gb|ADWV01000036.1| GENE 27 32466 - 33732 901 422 aa, chain + ## HITS:1 COG:ydcJ KEGG:ns NR:ns ## COG: ydcJ COG5383 # Protein_GI_number: 16129382 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 422 1 422 447 820 99.0 0 MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADEL ARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLA RNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEF VQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMP ECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTP KGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHR QAIHPGDDPQPLIERGWVAAQPITYEDFLPVSAAGIFQSNLGNETQTRSHGNASREAFEQ AL Prediction of potential genes in microbial genomes Time: Sun May 15 15:55:32 2011 Seq name: gi|299856414|gb|ADWV01000037.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont36.1, whole genome shotgun sequence Length of sequence - 33330 bp Number of predicted genes - 40, with homology - 38 Number of transcription units - 20, operones - 10 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 146 - 1045 432 ## EC55989_1369 hypothetical protein - Prom 1099 - 1158 7.7 - Term 1192 - 1233 1.3 2 2 Op 1 . - CDS 1298 - 1720 108 ## EC55989_1368 conserved hypothetical protein from phage origin 3 2 Op 2 . - CDS 1761 - 2726 323 ## ECIAI39_1487 hypothetical protein 4 2 Op 3 . - CDS 2707 - 3228 202 ## ECUMN_1853 hypothetical protein 5 2 Op 4 . - CDS 3212 - 3442 169 ## JW1561 DNA-binding transcriptional regulator - Prom 3468 - 3527 4.8 + Prom 3408 - 3467 2.6 6 3 Tu 1 . + CDS 3526 - 3933 164 ## COG1396 Predicted transcriptional regulators + Prom 3970 - 4029 4.6 7 4 Op 1 . + CDS 4100 - 4255 150 ## ECUMN_1856 hypothetical protein 8 4 Op 2 . + CDS 4215 - 4385 185 ## ECUMN_1857 hypothetical protein 9 4 Op 3 . + CDS 4415 - 4633 214 ## ECH74115_2280 hypothetical protein - Term 4419 - 4465 -0.3 10 5 Tu 1 . - CDS 4637 - 4801 85 ## ECSP_1720 hypothetical protein + Prom 4920 - 4979 2.4 11 6 Op 1 . + CDS 5201 - 5389 219 ## ECUMN_1859 putative regulator of cell division encoded by prophage 12 6 Op 2 . + CDS 5386 - 5577 135 ## ECO111_2043 hypothetical protein + Prom 5592 - 5651 1.6 13 6 Op 3 . + CDS 5671 - 8142 1284 ## ECIAI1_1626 putative exonuclease from phage origin + Term 8144 - 8180 -0.2 - Term 7959 - 7993 0.3 14 7 Tu 1 . - CDS 8139 - 8231 69 ## - Prom 8280 - 8339 5.0 15 8 Op 1 . + CDS 8215 - 8466 214 ## ECED1_1745 putative excisionase 16 8 Op 2 . + CDS 8501 - 9781 310 ## COG0582 Integrase - Term 9714 - 9754 -0.0 17 9 Op 1 2/0.000 - CDS 9969 - 10988 1000 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 18 9 Op 2 2/0.000 - CDS 11000 - 12214 1303 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 12352 - 12411 4.0 19 9 Op 3 . - CDS 12420 - 12746 267 ## COG1742 Uncharacterized conserved protein - Prom 12870 - 12929 4.7 + Prom 12722 - 12781 4.8 20 10 Op 1 . + CDS 12881 - 13222 323 ## S1720 hypothetical protein 21 10 Op 2 . + CDS 13257 - 13817 484 ## PROTEIN SUPPORTED gi|116490772|ref|YP_810316.1| acetyltransferase - Term 13770 - 13809 -0.7 22 11 Tu 1 . - CDS 13820 - 14443 562 ## ECBD_2061 hypothetical protein - Prom 14575 - 14634 3.4 + Prom 14557 - 14616 2.3 23 12 Tu 1 . + CDS 14638 - 14943 245 ## ECSE_1707 hypothetical protein + Term 14960 - 14995 3.7 + Prom 15050 - 15109 4.3 24 13 Tu 1 . + CDS 15142 - 16620 1299 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Term 16966 - 17001 4.9 25 14 Op 1 . - CDS 17085 - 17465 313 ## S1727 hypothetical protein 26 14 Op 2 . - CDS 17426 - 18073 494 ## S1727 hypothetical protein 27 14 Op 3 . - CDS 18160 - 18669 565 ## S1728 hypothetical protein 28 15 Op 1 . - CDS 18785 - 18997 132 ## 29 15 Op 2 . - CDS 18997 - 20088 717 ## gi|300819746|ref|ZP_07099935.1| hypothetical protein HMPREF9345_04844 30 16 Tu 1 . - CDS 20485 - 20853 288 ## S1732 hypothetical protein - Prom 20889 - 20948 2.4 31 17 Tu 1 . - CDS 21376 - 22731 431 ## COG0582 Integrase - Prom 22944 - 23003 3.6 32 18 Op 1 5/0.000 + CDS 22957 - 24066 912 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 33 18 Op 2 16/0.000 + CDS 24127 - 26550 1716 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 34 18 Op 3 9/0.000 + CDS 26561 - 27178 430 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 35 18 Op 4 4/0.000 + CDS 27180 - 28034 655 ## COG3302 DMSO reductase anchor subunit + Term 28042 - 28072 3.0 36 18 Op 5 . + CDS 28077 - 28691 596 ## COG3381 Uncharacterized component of anaerobic dehydrogenases + Prom 28701 - 28760 5.3 37 19 Tu 1 . + CDS 28887 - 30143 1137 ## COG0038 Chloride channel protein EriC - Term 30014 - 30052 7.6 38 20 Op 1 3/0.000 - CDS 30096 - 30791 793 ## COG0132 Dethiobiotin synthetase - Prom 30811 - 30870 4.7 - Term 30810 - 30874 6.5 39 20 Op 2 5/0.000 - CDS 30916 - 32136 279 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 - Prom 32174 - 32233 1.6 40 20 Op 3 . - CDS 32271 - 33164 204 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 - Prom 33188 - 33247 4.7 Predicted protein(s) >gi|299856414|gb|ADWV01000037.1| GENE 1 146 - 1045 432 299 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1369 NR:ns ## KEGG: EC55989_1369 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 299 1 299 299 542 98.0 1e-153 MIDPLIRNLQSDIALLQLYIAQRKQAGFHDMERIIESLTIFMFRALKMGELVNMNQIKVN FPAIDLADNKNMIAVQVTTNASPAKIKKTIESFEKINEIGESLKDKYSTLYIFGFCKASR YLTPSYCKIIDPSYFVNELCDKADEDMVQDMIDAIRRHHDYTSLHPWSDKDSLEIILNII NRNAIKHRMSCEGSLSDMLTGLKEINEVITKGTIQRKQRSKSISDFKDQSMVKFMRGVMD DLSVIQAIVNKSKVNQGDMVYISHEDMINIDKLKAKIASDSSEIARLNNIDITLNVVDL >gi|299856414|gb|ADWV01000037.1| GENE 2 1298 - 1720 108 140 aa, chain - ## HITS:1 COG:no KEGG:EC55989_1368 NR:ns ## KEGG: EC55989_1368 # Name: not_defined # Def: conserved hypothetical protein from phage origin # Organism: E.coli_55989 # Pathway: not_defined # 1 140 1 140 140 247 99.0 8e-65 MAKVFTQEEREKIKGQVVELVRRSGRETLRQLEVKTGATRYLMSVLARELVASGDVYNSG YGLFPSEQARKDWQNARKKLSRAKLKEPSAVDPDLIWSLPDGEIRRYDRRQNIICRECRK SEVMQRILAFYQGNARYLLK >gi|299856414|gb|ADWV01000037.1| GENE 3 1761 - 2726 323 321 aa, chain - ## HITS:1 COG:no KEGG:ECIAI39_1487 NR:ns ## KEGG: ECIAI39_1487 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 1 321 19 339 339 596 96.0 1e-169 MSLLFAERPLVINTQLAMKIGLNEAIVLQQLHYWLRDTNSGMECDGVRWIYNTTEQWLEQ FPFWSESTLKRAFASLKTLGLLRCEKLNKSKRDMTNFYTINYGSELLDGGKLSESIGLKC AAPSGQNDTMEEVKMKRSIGSKRLNVIGSKWPDDLTENTTEITTENKKTSRPEASQPDPQ TVEQDFLTRHPDAVVFSAKKRQWGSQEDLACAQWIWGRIVSLYEQAASDDGEISRPKEPN WTAWANDVRTMRMLDGRTHRQICEMFGRVQRDPFWVKNIMSPSKLREKWDELVIRLGRSS VQRCVNHISEPDTEIPPGFRG >gi|299856414|gb|ADWV01000037.1| GENE 4 2707 - 3228 202 173 aa, chain - ## HITS:1 COG:no KEGG:ECUMN_1853 NR:ns ## KEGG: ECUMN_1853 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 173 1 173 173 331 98.0 7e-90 MKITPEQAREALDAWICRPGMTQEQATILITEAFWALKERPNIDVQRVTDEGGAVDQRAL GVNRVKIFERWKAIDTRDKREKFTALVPAIMEAIRISDFRLYREISDGKSITYMIAGLNK EYGDVVESGLLFADPAVVDRETDELIEKAIAFKLAYRQQYQQKAGWNYESSFC >gi|299856414|gb|ADWV01000037.1| GENE 5 3212 - 3442 169 76 aa, chain - ## HITS:1 COG:no KEGG:JW1561 NR:ns ## KEGG: JW1561 # Name: dicC # Def: DNA-binding transcriptional regulator # Organism: E.coli_J # Pathway: not_defined # 1 76 1 76 76 139 100.0 4e-32 MLKTDALLYFGSKTKLAQAAGIRLASLYSWKGDLVPEGRAMRLQEASGGELQYDPKVYDE YRKTKRAGRLNNENHS >gi|299856414|gb|ADWV01000037.1| GENE 6 3526 - 3933 164 135 aa, chain + ## HITS:1 COG:dicA KEGG:ns NR:ns ## COG: dicA COG1396 # Protein_GI_number: 16129529 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli K12 # 1 135 1 135 135 229 99.0 8e-61 METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERDDSEPTGKNLFALSKVLQ CSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALPESEQDTQLAEMRARVKNFNK LFEELLKARQRTNKR >gi|299856414|gb|ADWV01000037.1| GENE 7 4100 - 4255 150 51 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1856 NR:ns ## KEGG: ECUMN_1856 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 51 53 103 103 97 100.0 1e-19 MDTIDLGNNESLVYGVFPNQDGTFTAMTYTKSKTFKTENGARRWLERNSGE >gi|299856414|gb|ADWV01000037.1| GENE 8 4215 - 4385 185 56 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1857 NR:ns ## KEGG: ECUMN_1857 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_UMN026 # Pathway: not_defined # 1 55 1 55 205 97 87.0 1e-19 MVPVAGWKETQVSDMDFDTIMEKAYEEYFEGLAEGEEALSFNEFKQALSSSAKSNG >gi|299856414|gb|ADWV01000037.1| GENE 9 4415 - 4633 214 72 aa, chain + ## HITS:1 COG:no KEGG:ECH74115_2280 NR:ns ## KEGG: ECH74115_2280 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 72 1 72 72 114 98.0 8e-25 MQKREPVIIAPDYTDDELYEWMHQKINAAQDLKWANEARAKQAENLSALEQDITRLEKAA ALSIARMITYPR >gi|299856414|gb|ADWV01000037.1| GENE 10 4637 - 4801 85 54 aa, chain - ## HITS:1 COG:no KEGG:ECSP_1720 NR:ns ## KEGG: ECSP_1720 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 54 58 111 111 95 96.0 7e-19 MNQLPRRALSRYGLTFHGNILSVNCQCRMLTRVRRTHSTSPVENSLITNLSFVG >gi|299856414|gb|ADWV01000037.1| GENE 11 5201 - 5389 219 62 aa, chain + ## HITS:1 COG:no KEGG:ECUMN_1859 NR:ns ## KEGG: ECUMN_1859 # Name: not_defined # Def: putative regulator of cell division encoded by prophage # Organism: E.coli_UMN026 # Pathway: not_defined # 1 62 36 97 97 123 100.0 2e-27 MKTLLPNVNTSEGCFEIGVTISNPVFTEDAINKRKQERELLNKICIVSMLARLRLMPKGC AQ >gi|299856414|gb|ADWV01000037.1| GENE 12 5386 - 5577 135 63 aa, chain + ## HITS:1 COG:no KEGG:ECO111_2043 NR:ns ## KEGG: ECO111_2043 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 63 1 63 63 120 100.0 1e-26 MNSAFALVLTVFLVSGEPVDIAVSVHRTMQECMTAATEQKIPGNCYPVDKVIHQDNIEIP AGL >gi|299856414|gb|ADWV01000037.1| GENE 13 5671 - 8142 1284 823 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_1626 NR:ns ## KEGG: ECIAI1_1626 # Name: not_defined # Def: putative exonuclease from phage origin # Organism: E.coli_IAI1 # Pathway: not_defined # 1 823 13 835 835 1597 98.0 0 MSKVFICAAIPDELATREEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFIV CEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPMNVTFDKLAPEVQNAVMVK FDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNAMYPELKLHAIGWVKHKCI PGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARARANQQYTENSTGKISPVIAAIH REYKQTWKTLDDELAYALWPGDVDAGNIDGSIHRWAKKEVIDNDREDWKRISASMRKQPD ALRYDRQTIFGLVRERPIDIHKDPIALNKYICEYLTTKGVFENEETDLGTVDVLQSSETQ TDAVETEVSDIPKNETAPEAEPSVEREGPFYFLFADKDGEKYGRANKLSGLDKALAAGAT EITKEEYFARKNGTYTGLPQYVDTAEDSEQPEPIKVTADEVNKIMQAANISQPDADKLLA ASRGEFVEGISDPNDPKWVKGIQTRDSVNQNQHESERNYQKAEQNSTNALQNEPETKQPE PVAQQEVEKVCTACGQTGGGNCPDCGAVMGDATYQETFDEEYQVEVQEDDPEEMEGAEHP HKENTGGNQHHNSDNETGETADHSIKVNGHHEITSTSRTCDHLMIDLETMGKNPDAPIIS IGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDDAL LQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKA IDFDARTAIPFEGERHNALDDARYQAKYVSVIWQKLIPSQADS >gi|299856414|gb|ADWV01000037.1| GENE 14 8139 - 8231 69 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MITSLIDFFISYIRRAPVAEYQSQPATVEH >gi|299856414|gb|ADWV01000037.1| GENE 15 8215 - 8466 214 83 aa, chain + ## HITS:1 COG:no KEGG:ECED1_1745 NR:ns ## KEGG: ECED1_1745 # Name: not_defined # Def: putative excisionase # Organism: E.coli_ED1a # Pathway: not_defined # 1 82 25 106 107 161 100.0 6e-39 MSEVIMIVSPGKWVSEEQLIALKGIKKGTLKKAREKSFMEGREYKHVAHDGMPWDNSPCF YNLEEIDRWIERQASARPRRHLT >gi|299856414|gb|ADWV01000037.1| GENE 16 8501 - 9781 310 426 aa, chain + ## HITS:1 COG:intQ KEGG:ns NR:ns ## COG: intQ COG0582 # Protein_GI_number: 16129537 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli K12 # 31 426 2 398 398 787 97.0 0 MKYPTGVENHGGKLRIWFVYKGVRVRENLGVPDTAKNRRVAGELRSSVCYAIKTGVFDYA KQFPSSRNLEKFGEARQDLTIKELAEKFLALKETEVAITSLNTYRAVIKNILSIIGEKNL ASSINKEKLLEVRKELLTGYQIPKSNYIVTQPGRSAVTVNNYMTNLNAVFQFGVDNGYLA DNPFKGISPLKESRTIPDPLSREEFIRLIDACRNQQAKNLWCVSVYTGVRPGELCALGWE DIDLKNGTMMIRRNLAKDRFTVPKTQAGTNRVIHLIKPAIDALRSQMTLTRLSKEHIIDV HLREYGRTEKQKCTFVFQPEVSARVKNYGDHFTVDSIRQMWDAAIKRAGLRHRKSYQSRH TYACWSLTAGANPAFIANQMGHADAQMVFQVYGKWMSENNNAQVALLNTQLSEFAPTMPH NEAMKN >gi|299856414|gb|ADWV01000037.1| GENE 17 9969 - 10988 1000 339 aa, chain - ## HITS:1 COG:rspB KEGG:ns NR:ns ## COG: rspB COG1063 # Protein_GI_number: 16129538 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Escherichia coli K12 # 1 339 1 339 339 678 98.0 0 MKSILIEKPNQLSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHE FFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEY AVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVL KGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGEIFAEKGIKPTLIIDAACHPS ILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPVVIDWLSKGL IKPEKLITHTFDFQHVADAISLFEQDQKHCCKVLLTFSE >gi|299856414|gb|ADWV01000037.1| GENE 18 11000 - 12214 1303 404 aa, chain - ## HITS:1 COG:rspA KEGG:ns NR:ns ## COG: rspA COG4948 # Protein_GI_number: 16129539 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Escherichia coli K12 # 1 404 1 404 404 868 100.0 0 MKIVKAEVFVTCPGRNFVTLKITTEDGITGLGDATLNGRELSVASYLQDHLCPQLIGRDA HRIEDIWQFFYKGAYWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLGGASREGVMVY CHTTGHSIDEALDDYARHQELGFKAIRVQCGIPGMKTTYGMSKGKGLAYEPATKGQWPEE QLWSTEKYLDFMPKLFDAVRNKFGFNEHLLHDMHHRLTPIEAARFGKSIEDYRMFWMEDP TPAENQECFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTLTHAGGITGMRRI ADFASLYQVRTGSHGPSDLSPVCMAAALHFDLWVPNFGVQEYMGYSEQMLEVFPHNWTFD NGYMHPGDKPGLGIEFDEKLAAKYPYEPAYLPVARLEDGTLWNW >gi|299856414|gb|ADWV01000037.1| GENE 19 12420 - 12746 267 108 aa, chain - ## HITS:1 COG:ynfA KEGG:ns NR:ns ## COG: ynfA COG1742 # Protein_GI_number: 16129540 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 108 1 108 108 164 100.0 3e-41 MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVY AAYGGVYVCTALMWLRVVDGVKLTLYDWTGALIALCGMLIIVAGWGRT >gi|299856414|gb|ADWV01000037.1| GENE 20 12881 - 13222 323 113 aa, chain + ## HITS:1 COG:no KEGG:S1720 NR:ns ## KEGG: S1720 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 113 1 113 113 207 100.0 1e-52 MKITLSKRIGLLAFLLPCALALSTTVHAETNKLVIESGDSAQSRQHAAMEKEQWNDTRNL RQKVNKRTEKEWDKADAAFDNRDKCEQSANINAYWEPNTLRCLDRRTGRVITP >gi|299856414|gb|ADWV01000037.1| GENE 21 13257 - 13817 484 186 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116490772|ref|YP_810316.1| acetyltransferase [Oenococcus oeni PSU-1] # 7 168 3 164 167 191 54 7e-48 MPSAHSVKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRF VVECDGEKAGLVELVEINHVHRRAEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKL YLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAIRMCIFQHQYLAEHKTPGQTL LKPTAQ >gi|299856414|gb|ADWV01000037.1| GENE 22 13820 - 14443 562 207 aa, chain - ## HITS:1 COG:no KEGG:ECBD_2061 NR:ns ## KEGG: ECBD_2061 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 207 42 248 248 406 100.0 1e-112 MASFSNEFDFDPLRGPVKDFTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTVVA LVLDANYYRDAETLEKRVRLQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDD QGYPLGKTTKSNDKTLSVSATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHANPVD CQLIIVDEGVKPAVERVYTIKNTIDYY >gi|299856414|gb|ADWV01000037.1| GENE 23 14638 - 14943 245 101 aa, chain + ## HITS:1 COG:no KEGG:ECSE_1707 NR:ns ## KEGG: ECSE_1707 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 101 2 102 102 155 99.0 3e-37 MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQP DSQVVGHCANDTHKILYTRTTSGNVSAPAQSTQDGAPAEPQ >gi|299856414|gb|ADWV01000037.1| GENE 24 15142 - 16620 1299 492 aa, chain + ## HITS:1 COG:ynfE KEGG:ns NR:ns ## COG: ynfE COG0243 # Protein_GI_number: 16129545 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 471 1 471 808 960 98.0 0 MSKNDRMVGISRRTLVKSTAIGSLALAAGGFSLPFTLRSAAAAVQQASEKVIWGACSVNC GSRCALRLHVKDNEVTWVETDNTGSDEYGNHQVRACLRGRSIRRRINHPDRLNYPMKRVG TRGEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKR LMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTTDIENSKLVVMFGNNPAETRMSGG GITYLLEKAREKSNAKMIVIDPRYTDTAAGREDEWLPIRPGTDAALVAGIAWVLINENLV DQPFLDKYCVGYDEKTLPADAPKNGHYKAYILGEGDDNTAKTPQWASQITGIPVDRIIKL AREIGTAKPAYICQGWGPQRQANGELTARAIAMLPILTGNVGISGGNSGARESTYTITIE RLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNFKDLKRLLVR VTRDLSRPEVLH >gi|299856414|gb|ADWV01000037.1| GENE 25 17085 - 17465 313 126 aa, chain - ## HITS:1 COG:no KEGG:S1727 NR:ns ## KEGG: S1727 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 126 204 329 329 238 96.0 4e-62 MSDYGIIAHESQLKALSRLAAKQGFSGEDAIVDMLGTDIAYYNGEDKGVFMMAKRFTALS FGCFRHDGENITVVLSRDGDSQSNDLEILGKVFVVAEAATTIKMDTGSATAVLPVVKRLK FTKTEA >gi|299856414|gb|ADWV01000037.1| GENE 26 17426 - 18073 494 215 aa, chain - ## HITS:1 COG:no KEGG:S1727 NR:ns ## KEGG: S1727 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 193 1 193 329 355 97.0 5e-97 MNMIKDAFQFGIEPVRITDTDNIQVNEGLPTNADPQVYALQLAKTVKAMLNGVLKDAQEN IPFPVEVLPTRNSLPTPIIAHTLADRSVVVPVHGGKRPEVVTVPSGQEIVVEPIEQAILI SEQTKLWDAKSSTGFTQGTLQQDAMNICENVVRTINARMVDVLESSKLLKTVELPVLTGS LTAKADTIMDALFRTPSPLSALKCLITASSPMSPN >gi|299856414|gb|ADWV01000037.1| GENE 27 18160 - 18669 565 169 aa, chain - ## HITS:1 COG:no KEGG:S1728 NR:ns ## KEGG: S1728 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 8 169 2 163 163 272 93.0 4e-72 MSSKASALFNNNDWKLSVTDINLYENTVRLDGQPYPLSLAIKTLIPGYLSGLPSTSSAAM ELLEALAEAGVAIGNFFSNDLMTAYGRRQLNKRAEAERIAKEQRLQAERMREENMSDAEW QKELQRREQVKAERRTYGENLRSATHSAGRSRAAIVADIESGGNWMDSL >gi|299856414|gb|ADWV01000037.1| GENE 28 18785 - 18997 132 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTIKQHIDPRTSIGRATLRYRGLPTRHLLSMLGMGTDSSERPYYSRDELIAMLVDRDLNN QLRRAFAKQS >gi|299856414|gb|ADWV01000037.1| GENE 29 18997 - 20088 717 363 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300819746|ref|ZP_07099935.1| ## NR: gi|300819746|ref|ZP_07099935.1| hypothetical protein HMPREF9345_04844 [Escherichia coli MS 107-1] # 1 363 1 363 363 765 100.0 0 MNIHKFIDLNEVIASNHPLANGTTDSVTQVIVAHLKSSDAGIDILNAPKVASDMSASFLN DLKSKYRVVTGRNSEGHIDAWLAHKHSGRRVTTRSNDKGYRAVNVNGRPYQEHRLIMALF YDVALPGWVVVNHAVSCTIWNEGKSNHPFNLRLTTAYGNQLDKKVREGVRNKFTGYHFDE YRGKRRVQMKLPFVGDLKHFGYYDTEAEAYIVRCAVLHKHLGSFWAVTTGESGLIPRVKP DGSLVLPAEHGYDWAENLPYPEDWDDEFKARLEEMKLYWDAYHVFGIEDEEYFGDCVSGL DVNAVVFNGVPAIINITEGLPVSYAHWFGPSQRFEFTNYYQRCIHACDLDAEPEDEGWME NDF >gi|299856414|gb|ADWV01000037.1| GENE 30 20485 - 20853 288 122 aa, chain - ## HITS:1 COG:no KEGG:S1732 NR:ns ## KEGG: S1732 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 122 1 122 122 221 98.0 7e-57 MARPIATHDNTFTKAYLQQHCGDLLSFDGQGDLSGWLDDVLTGAGRLSESMASNTKPVSP YLILTQLLTHDTLTVSAVQESLSRKRVALGEPMVSTRYARYVYAAVVSASKSVQYHASKA GS >gi|299856414|gb|ADWV01000037.1| GENE 31 21376 - 22731 431 451 aa, chain - ## HITS:1 COG:VCA0790_2 KEGG:ns NR:ns ## COG: VCA0790_2 COG0582 # Protein_GI_number: 15601545 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Vibrio cholerae # 142 356 22 246 266 78 30.0 3e-14 MRQRELAATAKAFMLDRPEVSLQELKEHLRSMAEQFLTDASDDYWNGLEVATLVDEKSNL KELAATQALSLDQQKGIRLALEVLTAAQQRVDTGDTSSLIKLIDGGVSQLTDDNNHTDYS TISDSTSILKNEQGDRPAVLTQERQPSVVFSSLVSSLLAEKVQTLKSSSYKDLSSSLNTV SRFLPEDMDLMSRSGWLAVRDSMLASEVRPSTINKLLTKAKMCLDYGLMNGQLEGRNPIE RMKLTKDIDSKRRAFTDEELERLLVRVEAEYQFTRHTAQTSSEARRWASLVSVITGARAA EVCHLTKRDIVTLDNGLVCIDINEDGEGKSVKNKHSVRLVPLTDGAYGFDLASFLSWVDT QPDEGPLFGMTPSAYSSWFNSRVLTEALGDAENVSLHSLRHWLATRMKERGVNLVDAQGI LGHSSQSITYDLYGKGHAVGRLSEVLKTALL >gi|299856414|gb|ADWV01000037.1| GENE 32 22957 - 24066 912 369 aa, chain + ## HITS:1 COG:ynfE KEGG:ns NR:ns ## COG: ynfE COG0243 # Protein_GI_number: 16129545 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 26 369 465 808 808 728 99.0 0 MVNVSHIRTLSSVESTTSSPSIRLAMEFIWNYAGNTLVNQHSDINKTHEILQDESKCEMI VIIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWI LSEVAKRLGPDVYQKFTEGRTQEQWLQHLYAKMLAKDPALPSYDELKKMGIYKRKDPNGH FVAYKAFRDDPEANPLKTPSGKIEIYSSRLAEIARTWELEKDEVISPLPVYASTFEGWNS PERRTFPLQLFGFHYKSRTHSTYGNIDLLKAACRQEVWINPIDAQKRGIANGDMVRVFNH RGEVRLPAKVTPRILPGVSAMGQGAWHEANMSGDKIDHGGCVNTLTTLRPSPLAKGNPQH TNLVEIEKI >gi|299856414|gb|ADWV01000037.1| GENE 33 24127 - 26550 1716 807 aa, chain + ## HITS:1 COG:ynfF KEGG:ns NR:ns ## COG: ynfF COG0243 # Protein_GI_number: 16129546 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 807 2 808 808 1702 100.0 0 MKIHTTEALMKAEISRRSLMKTSALGSLALASSAFTLPFSQMVRAAEAPVEEKAVWSSCT VNCGSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRACLRGRSIRRRMNHPDRLKYPMK RVGKRGEGKFERISWDEALDTISDNLRRILKDYGNEAVHVLYGTGVDGGNITNSNVPYRL MNSCGGFLSRYGSYSTAQISAAMSYMFGANDGNSPDDIANTKLVVMFGNNPAETRMSGGG VTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALACAIAWVLITENMVD QPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEGPDGIAKTPEWAAKITSIPAEKIIQLA REIGSAKPAYICQGWGPQRHSNGEQTSRAIAMLSVLTGNVGINGGNSGVREGSWDLGVEW FPMLENPVKTQISVFTWTDAIDHGTEMTATRDGVRGKEKLDVPIKFLWCYASNTLINQHG DINHTHEVLQDDSKCEMIVGIDHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVI LAQPATSAKFERKPIYWMLSEVAKRLGPDVYQTFTEGRSQHEWIKYLHAKTKERNPEMPD YEEMKTTGIFKKKCPEEHYVAFRAFREDPQANPLKTPSGKIEIYSERLAKIADTWELKKD EIIHPLPAYTPGFDGWDDPLRKTYPLQLTGFHYKARTHSSYGNIDVLQQACPQEVWINPI DAQARGIRHGDTVRVFNNNGEMLIAAKVTPRILPGVTAIGQGAWLKADMFGDRVDHGGSI NILTSHRPSPLAKGNPSHSNLVQIEKV >gi|299856414|gb|ADWV01000037.1| GENE 34 26561 - 27178 430 205 aa, chain + ## HITS:1 COG:ECs2295 KEGG:ns NR:ns ## COG: ECs2295 COG0437 # Protein_GI_number: 15831549 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 205 1 205 205 416 100.0 1e-116 MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFA YYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEK GHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQKHGTLAAVAPLPRAHFTKPN IVIKPNANSRPTGDTTGYLANPEEV >gi|299856414|gb|ADWV01000037.1| GENE 35 27180 - 28034 655 284 aa, chain + ## HITS:1 COG:ynfH KEGG:ns NR:ns ## COG: ynfH COG3302 # Protein_GI_number: 16129548 # Func_class: R General function prediction only # Function: DMSO reductase anchor subunit # Organism: Escherichia coli K12 # 1 284 1 284 284 450 99.0 1e-126 MGNGWHEWPLVIFTVLGQCVVGALIVSGIGWFAAKNDADRQRIVRGMFFLWLLMGIGFIA SVMHLGSPLRAFNSLNRIGASGLSNEIAAGSIFFAVGGLWWLVAVIGKMPQALGKLWLLV SMALGVIFVWMMTCVYQIDTVPTWHNGYTTLAFFLTVLLSGPILAAAILRAARVTFNTTP FAIISVLALIACAGVIVLQGLSLASIHSSVQQASALVPDYASLQVWRVVLLCAGLGCWLC PLIRRREPHVAGLILGLILILGGEMIGRVLFYGLHMTVGMAIAG >gi|299856414|gb|ADWV01000037.1| GENE 36 28077 - 28691 596 204 aa, chain + ## HITS:1 COG:ECs2297 KEGG:ns NR:ns ## COG: ECs2297 COG3381 # Protein_GI_number: 15831551 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Escherichia coli O157:H7 # 1 204 4 207 207 371 100.0 1e-103 MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAF QTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMK QNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGE LARLTLAQWQSQLLIPVAVKPLFR >gi|299856414|gb|ADWV01000037.1| GENE 37 28887 - 30143 1137 418 aa, chain + ## HITS:1 COG:ynfJ KEGG:ns NR:ns ## COG: ynfJ COG0038 # Protein_GI_number: 16129550 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Escherichia coli K12 # 1 418 21 438 438 684 99.0 0 MFRRLLIATVVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSPWRRLLTPALG GLAAGLLLMGWQKFTQQRPHAPTDYMEALQTDGQFDYAASLVKSLASLLVVTSGSAIGRE GAMILLAALAASCFAQRFTPRQEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVLFGTMML ASLGPVIISAVVALLVSNLINHSDALLYNVQLSVTVQARDYALIISTGVLAGLCGPLLLT LMNACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAG IFLCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTGMA TLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIASVISRTLHRDSIYRQHTAQHS >gi|299856414|gb|ADWV01000037.1| GENE 38 30096 - 30791 793 231 aa, chain - ## HITS:1 COG:ECs2299 KEGG:ns NR:ns ## COG: ECs2299 COG0132 # Protein_GI_number: 15831553 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Escherichia coli O157:H7 # 1 231 5 235 235 444 100.0 1e-125 MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGSKETPEGLRNKDALVLQ SVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANLTEKVDHVVVEGTGGWRSL MNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIANDGLPLIGWVANRINPGLAH YAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLAMLRSVLAVDRVTV >gi|299856414|gb|ADWV01000037.1| GENE 39 30916 - 32136 279 406 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 146 394 63 317 323 112 29 4e-24 MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLV QELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKD DSPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGE ALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSS SLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSL CQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIR QQALPAYSQHISVESTQFSDQGTMAGAALVKDAMYNGSLLIRLLQG >gi|299856414|gb|ADWV01000037.1| GENE 40 32271 - 33164 204 297 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 3 245 1 239 305 83 26 2e-15 MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLT AAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRRDY PDVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPETLEHAVIVHEPLMAMIPHDHPLAN NPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGL GVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNFRIHLLNALR Prediction of potential genes in microbial genomes Time: Sun May 15 15:56:56 2011 Seq name: gi|299856413|gb|ADWV01000038.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont37.1, whole genome shotgun sequence Length of sequence - 32883 bp Number of predicted genes - 27, with homology - 27 Number of transcription units - 13, operones - 7 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 13/0.000 - CDS 3 - 1185 1171 ## COG1140 Nitrate reductase beta subunit 2 1 Op 2 10/0.000 - CDS 1182 - 4922 3854 ## COG5013 Nitrate reductase alpha subunit 3 1 Op 3 2/0.667 - CDS 5004 - 6392 958 ## COG2223 Nitrate/nitrite transporter 4 2 Op 1 2/0.667 - CDS 6716 - 8011 285 ## COG4886 Leucine-rich repeat (LRR) protein 5 2 Op 2 3/0.667 - CDS 8071 - 8361 390 ## COG3203 Outer membrane protein (porin) - Prom 8400 - 8459 5.8 6 3 Tu 1 . - CDS 8620 - 9444 693 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 9673 - 9732 4.2 + Prom 9488 - 9547 6.2 7 4 Op 1 5/0.000 + CDS 9733 - 10320 618 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 8 4 Op 2 16/0.000 + CDS 10369 - 12780 2740 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 9 4 Op 3 12/0.000 + CDS 12793 - 13677 915 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 10 4 Op 4 . + CDS 13670 - 14323 894 ## COG2864 Cytochrome b subunit of formate dehydrogenase + Term 14344 - 14385 9.0 - Term 14337 - 14368 3.4 11 5 Tu 1 . - CDS 14374 - 14658 329 ## COG3093 Plasmid maintenance system antidote protein 12 6 Tu 1 . - CDS 14805 - 15815 965 ## COG1064 Zn-dependent alcohol dehydrogenases - Prom 15876 - 15935 3.0 - Term 15907 - 15942 6.5 13 7 Tu 1 . - CDS 15949 - 17547 1803 ## COG0281 Malic enzyme - Prom 17728 - 17787 4.4 - Term 17728 - 17775 7.3 14 8 Op 1 . - CDS 17801 - 17938 230 ## PROTEIN SUPPORTED gi|15801657|ref|NP_287675.1| 30S ribosomal subunit S22 15 8 Op 2 . - CDS 18040 - 18255 288 ## APECO1_616 biofilm-dependent modulation protein - Prom 18372 - 18431 5.7 + Prom 18329 - 18388 7.1 16 9 Tu 1 . + CDS 18601 - 19032 539 ## COG1764 Predicted redox protein, regulator of disulfide bond formation + Term 19048 - 19087 6.5 17 10 Op 1 17/0.000 - CDS 19088 - 20014 603 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 18 10 Op 2 44/0.000 - CDS 20007 - 20993 464 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 19 10 Op 3 49/0.000 - CDS 20990 - 21883 832 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 20 10 Op 4 38/0.000 - CDS 21883 - 22905 315 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 21 10 Op 5 3/0.667 - CDS 22907 - 24457 1662 ## COG0747 ABC-type dipeptide transport system, periplasmic component 22 10 Op 6 1/1.000 - CDS 24471 - 25052 419 ## COG2173 D-alanyl-D-alanine dipeptidase - Prom 25225 - 25284 1.6 - Term 25271 - 25296 -0.5 23 11 Op 1 5/0.000 - CDS 25310 - 27709 2031 ## COG2202 FOG: PAS/PAC domain 24 11 Op 2 2/0.667 - CDS 27734 - 29116 1199 ## COG2199 FOG: GGDEF domain - Prom 29265 - 29324 6.3 25 12 Tu 1 . - CDS 29488 - 30642 738 ## COG1649 Uncharacterized protein conserved in bacteria - Term 30878 - 30912 5.2 26 13 Op 1 7/0.000 - CDS 30938 - 32473 1605 ## COG0531 Amino acid transporters 27 13 Op 2 . - CDS 32629 - 32883 377 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins Predicted protein(s) >gi|299856413|gb|ADWV01000038.1| GENE 1 3 - 1185 1171 394 aa, chain - ## HITS:1 COG:ECs2070 KEGG:ns NR:ns ## COG: ECs2070 COG1140 # Protein_GI_number: 15831324 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Escherichia coli O157:H7 # 1 394 1 394 514 847 99.0 0 MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTGREGMEYAWFNNVETKPGIGYPKNWEDQE EWQGGWVRDVNGKIRPRLGSKMGVITKIFANPVVPQIDDYYEPFTFDYEHLHSAPEGKHI PTARPRSLIDGKRMDKVIWGPNWEELLGGEFEKRARDRNFEAMQKEMYGQFENTFMMYLP RLCEHCLNPSCVATCPSGAIYKREEDGIVLIDQDKCRGWRLCISGCPYKKIYFNWKSGKS EKCIFCYPRIESGQPTVCSETCVGRIRYLGVLLYDADRIEEAASTEREVDLYERQCEVFL DPHDPSVIEEALKQGIPQNVIEAAQRSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSP IQSYADAGGLPKSEGVLPAIESLRIPVQYLANML >gi|299856413|gb|ADWV01000038.1| GENE 2 1182 - 4922 3854 1246 aa, chain - ## HITS:1 COG:narZ KEGG:ns NR:ns ## COG: narZ COG5013 # Protein_GI_number: 16129427 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Escherichia coli K12 # 1 1246 1 1246 1246 2609 99.0 0 MSKLLDRFRYFKQKGETFADGHGQVMHSNRDWEDSYRQRWQFDKIVRSTHGVNCTGSCSW KIYVKNGLVTWEIQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLIRKRLIE LWREALKQHSDPVLAWASIMNDPQKCLSYKQVRGRGGFIRSNWQELNQLIAAANVWTIKT YGPDRVAGFSPIPAMSMVSYAAGTRYLSLLGGTCLSFYDWYCDLPPASPMTWGEQTDVPE SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTIAITPDYSEVAKLCDQWLAPKQ GTDSALAMAMGHVILKEFHLDNPSDYFINYCRRYSDMPMLVMLEPRDDGSYVPGRMIRAS DLVDGLGESNNPQWKTVAVNTAGELVVPNGAIGFRWGEKGKWNLESIAAGTETELSLTLL GQHDAVAGVAFPYFGGIENPHFRSVKHNPVLVRQLPVKNLTLVDGNTCPVVSVYDLVLAN YGLDRGLEDENSAKDYAEIKPYTPAWGEQITGVPRQYIESIAREFADTAHKTHGRSMIIL GAGVNHWYHMDMNYRGMINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWLPLAFALDWNR PPRQMNSTSFFYNHSSQWRYEKVSAQELLSPLADASKYSGHLIDFNVRAERMGWLPSAPQ LGRNPLGIKAEADKAGLSPTEFTAQALKSGDLRMACEQPDSGSNHPRNLFVWRSNLLGSS GKGHEYMQKYLLGTESGIQGEELGASDGIKPEEVEWQTAAIEGKLDLLVTLDFRMSSTCL FSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESRSDWEIYKGIAKAFSQVCVGH LGKETDVVLQPLLHDSPAELSQPCEVLDWRKGECDLIPGKTAPNIVAVERDYPATYERFT SLGPLMDKLGNGGKGISWNTQDEIDFLGKLNYTKRDGPAQGRPLIDTAIDASEVILALAP ETNGHVAVKAWQALGEITGREHTHLALHKEDEKIRFRDIQAQPRKIISSPTWSGLESDHV SYNAGYTNVHELIPWRTLSGRQQLYQDHPWMRAFGESLVAYRPPIDTRSVSEMRQIPPNG FPEKALNFLTPHQKWGIHSTYSENLLMLTLSRGGPIVWISETDARELTIVDNDWVEVFNA NGALTARAVVSQRVPPGMTMMYHAQERIMNIPGSEVTGMRGGIHNSVTRVCPKPTHMIGG YAQLAWGFNYYGTVGSNRDEFIMIRKMKNVNWLDDEGRDQVQEAKK >gi|299856413|gb|ADWV01000038.1| GENE 3 5004 - 6392 958 462 aa, chain - ## HITS:1 COG:narU KEGG:ns NR:ns ## COG: narU COG2223 # Protein_GI_number: 16129428 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Escherichia coli K12 # 1 462 1 462 462 774 99.0 0 MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNL NKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIA VQNTNTPFGVFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA SIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGA IARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAG LGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQKEAVTETAAALGFISAIGAVGGFFIPQ AFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRKFSQK >gi|299856413|gb|ADWV01000038.1| GENE 4 6716 - 8011 285 431 aa, chain - ## HITS:1 COG:ECs2073 KEGG:ns NR:ns ## COG: ECs2073 COG4886 # Protein_GI_number: 15831327 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Escherichia coli O157:H7 # 81 431 67 417 419 528 90.0 1e-150 MKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPL AQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQLTHFNATNYDRLV KLSLNSNTLESINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSAAHNQLEFVQLES CEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNTLLINNNLLSEIK IFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPI IKQSKNLNFLNVSGKNNCPTMQLMLFNLFSPALKLNTGLAILSPGAFEVHSDGIDVDNEL FHYPINKAYTPYNIHTYKTEEVVNQRNIKVKNMTLDEINNTYCNNDYYNQAIREEPIDLL DRSFSSSSWPF >gi|299856413|gb|ADWV01000038.1| GENE 5 8071 - 8361 390 96 aa, chain - ## HITS:1 COG:ECs2076 KEGG:ns NR:ns ## COG: ECs2076 COG3203 # Protein_GI_number: 15831330 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli O157:H7 # 1 94 1 94 366 170 97.0 5e-43 MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLG FKGETQINDQMIGFGHWEYDFKGYNDEANGSCGNNL >gi|299856413|gb|ADWV01000038.1| GENE 6 8620 - 9444 693 274 aa, chain - ## HITS:1 COG:ECs2077 KEGG:ns NR:ns ## COG: ECs2077 COG0697 # Protein_GI_number: 15831331 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 274 20 293 293 475 99.0 1e-134 MVGLIRGVSEELGPVGGAAAIYSLSGLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEICL ALSLGYAATRHQAIEVGMVNYLWPSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGG DNGLHYDEIINNITTSPLSYFLAFIGAFIWAAYCTVTNKYARGFNGITVFVLLTGASLWV YYFLTPQPEMVFSTPVMIKLISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSAL AAVLLSAPLSFSFWQGALMVCGGSLLCWLATRRG >gi|299856413|gb|ADWV01000038.1| GENE 7 9733 - 10320 618 195 aa, chain + ## HITS:1 COG:fdnG KEGG:ns NR:ns ## COG: fdnG COG0243 # Protein_GI_number: 16129433 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 195 1 195 1015 412 100.0 1e-115 MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAKEIRNTCTYCSVGCGLL MYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYVNSENRLRYPEYRAPGSDK WQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLSTGMLCASGASNETGMLTQKF ARSLGMLAVDNQARV >gi|299856413|gb|ADWV01000038.1| GENE 8 10369 - 12780 2740 803 aa, chain + ## HITS:1 COG:ECs2078 KEGG:ns NR:ns ## COG: ECs2078 COG0243 # Protein_GI_number: 15831332 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 803 213 1015 1015 1674 99.0 0 MTNHWVDIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIY APIRSGTDITFLSGVLRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQ YDKSSWNYQFDENGYAKRDETLTHPRCVWNLLKAHVSRYTPDVVENICGTPKADFLKVCE VLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQ GLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLADQVNYWSNYPKFFVSLMKSF YGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDKNKVVSC LSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDGSIANSGRW LQWHWKGQDAPGEARNDGEILAGIYHHLRELYQAEGGKGVEPLMKMSWNYKQPHEPQSDE VAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYTGSWTEQGNQMAN RDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLIQWNGSKWTGNDIPD FGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETPLGTNPLHPNVVSNPVV RLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIAQPEQFVEISETLAAAKGI NNGDRVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGIPIHWGFEGVARKGYIANTLT PNVGDANSQTPEYKAFLVNIEKA >gi|299856413|gb|ADWV01000038.1| GENE 9 12793 - 13677 915 294 aa, chain + ## HITS:1 COG:fdnH KEGG:ns NR:ns ## COG: fdnH COG0437 # Protein_GI_number: 16129434 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli K12 # 1 294 1 294 294 612 100.0 1e-175 MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVG HCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQ YANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRVSVGQEPACVKTCP TGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEGVGGTHVMYVLHHADQPELYHGL PKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHYIGIGPNKEVDDDEEDHHE >gi|299856413|gb|ADWV01000038.1| GENE 10 13670 - 14323 894 217 aa, chain + ## HITS:1 COG:STM1568 KEGG:ns NR:ns ## COG: STM1568 COG2864 # Protein_GI_number: 16764912 # Func_class: C Energy production and conversion # Function: Cytochrome b subunit of formate dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 217 1 217 218 408 98.0 1e-114 MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGTPQMGRILHPFF GIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSI MSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVKGSI KGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI >gi|299856413|gb|ADWV01000038.1| GENE 11 14374 - 14658 329 94 aa, chain - ## HITS:1 COG:yddM KEGG:ns NR:ns ## COG: yddM COG3093 # Protein_GI_number: 16129436 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Escherichia coli K12 # 1 94 27 120 120 169 100.0 1e-42 MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVVI GSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ >gi|299856413|gb|ADWV01000038.1| GENE 12 14805 - 15815 965 336 aa, chain - ## HITS:1 COG:ZadhP KEGG:ns NR:ns ## COG: ZadhP COG1064 # Protein_GI_number: 15801659 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli O157:H7 EDL933 # 1 336 11 346 346 605 100.0 1e-173 MKAAVVTKDHHVDVTDKTLRSLKHGEALLKMECCGVCHTDLHVKNGDFGDKTGVILGHEG IGVVAEVGPGVTSLKPGDRASVAWFYEGCGHCEYCNSGNETLCRSVKNAGYSVDGGMAEE CIVVADYAVKVPDGLDSAAASSITCAGVTTYKAVKLSKIRPGQWIAIYGLGGLGNLALQY AKNVFNAKVIAIDVNDEQLKLATEMGADLAINSRTEDAAKIVQEKTGGAHAAVVTAVAKA AFNSAVDAVRAGGRVVAVGLPPESMSLDIPRLVLDGIEVVGSLVGTRQDLTEAFQFAAEG KVVPKVALRPLADINTIFTEMEEGKIRGRMVIDFRR >gi|299856413|gb|ADWV01000038.1| GENE 13 15949 - 17547 1803 532 aa, chain - ## HITS:1 COG:sfcA KEGG:ns NR:ns ## COG: sfcA COG0281 # Protein_GI_number: 16129438 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Escherichia coli K12 # 1 532 43 574 574 1074 99.0 0 MEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVN NHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVT DGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGW RNPRITDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQG TAAVTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIISQTQREGLSEEAARQKVF MVDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQT GLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKD KIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELK DIQKVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWQAEYRDYRRTSI >gi|299856413|gb|ADWV01000038.1| GENE 14 17801 - 17938 230 45 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15801657|ref|NP_287675.1| 30S ribosomal subunit S22 [Escherichia coli O157:H7 EDL933] # 1 45 1 45 45 93 100 2e-18 MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAEK >gi|299856413|gb|ADWV01000038.1| GENE 15 18040 - 18255 288 71 aa, chain - ## HITS:1 COG:no KEGG:APECO1_616 NR:ns ## KEGG: APECO1_616 # Name: not_defined # Def: biofilm-dependent modulation protein # Organism: E.coli_APEC # Pathway: not_defined # 1 71 22 92 92 133 100.0 2e-30 MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWVEASDNDILSDIYQQTI NYVVSGQHPTL >gi|299856413|gb|ADWV01000038.1| GENE 16 18601 - 19032 539 143 aa, chain + ## HITS:1 COG:osmC KEGG:ns NR:ns ## COG: osmC COG1764 # Protein_GI_number: 16129441 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Escherichia coli K12 # 1 143 1 143 143 269 99.0 1e-72 MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEKGTNPEELIGAAHAACF SMALSLMLGEAGFTPTSIDTTADVLLDKVDAGFAITKIALKSEVAVPGIDASTFDGIIQK AKAGCPVSQVLKAEITLDYQLKS >gi|299856413|gb|ADWV01000038.1| GENE 17 19088 - 20014 603 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 2 291 8 310 329 236 40 1e-61 MSNTLLTLCDVHINFPARKNWLGKTTEHVHAINGIDLQIRRGETLGIVGESGCGKSTLAQ LLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRIITEPLWIAKRSSEQQRRA LAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQPDVIVLDEPTSALDISVQAQ ILNLLVTLQVNRGLTYVLISHNVSVIRHMSDRVAVMYLGQIVELGDAQQVLTAPAHPYTR LLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFFYERCPLATHGCEVRQSLTIREDGR EIRCWRAL >gi|299856413|gb|ADWV01000038.1| GENE 18 20007 - 20993 464 328 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 20 316 33 324 329 183 37 1e-45 MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRSEIVGLVGESGSGKSVTAMLIMRLLP TGSYCVHRGQISLLGEDVLNAREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIR HHQPISRREARAKAIALLEEMQIPDAVEVMSRYPFELSGGMRQRVMIALAFSCEPQLIIA DEPTTALDVTLQLQVLRLLKHKARASGTAVLFISHDMVVVSQLCDSVYVMYAGSVIESGV TADIIHHPRHPYTIGLLQCAPEHGVPRQPLPAIPGTVPNLTHLPEGCAFRDRCYAAGAQC ENVPALTACGDNNQRCACWYPQQEVISV >gi|299856413|gb|ADWV01000038.1| GENE 19 20990 - 21883 832 297 aa, chain - ## HITS:1 COG:ECs2089 KEGG:ns NR:ns ## COG: ECs2089 COG1173 # Protein_GI_number: 15831343 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Escherichia coli O157:H7 # 1 297 2 298 298 541 100.0 1e-154 MLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNAI DLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVL GGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALV VRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQ PSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAGGKQS >gi|299856413|gb|ADWV01000038.1| GENE 20 21883 - 22905 315 340 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 70 332 46 310 320 125 29 3e-28 MTFWSILRQRCWGLVLVVAGVCVITFIISHLIPGDPARLLGGDRASDAIVENIRQQLGLD QPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLELAFCALLLALLIGIPLGI LSAVWRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGHLQILPGGGRLDDWLDPPTHV TGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGIVARQIRSAMLEQLSEDYIRTAR ASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQAL DFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRIGRGGGE >gi|299856413|gb|ADWV01000038.1| GENE 21 22907 - 24457 1662 516 aa, chain - ## HITS:1 COG:ddpA KEGG:ns NR:ns ## COG: ddpA COG0747 # Protein_GI_number: 16129446 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli K12 # 1 516 1 516 516 1008 99.0 0 MKRSIPFRPTLLALVLATNFPVAHAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTVTYPS YQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDNAKFADGTPVTAEAVKLSF ERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFLYTLANDGASIINPAVLKEHA ADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYPGNKPNFKRVSVKIIGESASRRL QLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLRVTYLYLNNSKAPLNQADLRRAISW STDYQGMVNGILSGNGKQMRGPIPEGMWGYDATAMQYNHDETKAKAEWDKVTSKPTSLTF LYSDNDPNWEPIALATQSSLNKLGINVKLEKLANATMRDRVGKGDYDIAIGNWSPDFADP YMFMNYWFESDKKGLPGNRSFYENSEVDKLLRNALATTDQTQRTRDYQQAQKIVIDDAAY VYLFQKNYQLAMNKEVKGFVFNPMLEQVFNINTMSK >gi|299856413|gb|ADWV01000038.1| GENE 22 24471 - 25052 419 193 aa, chain - ## HITS:1 COG:ECs2092 KEGG:ns NR:ns ## COG: ECs2092 COG2173 # Protein_GI_number: 15831346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine dipeptidase # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 397 100.0 1e-111 MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLS GLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILDMGA GFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGISSEWWHFELPQAASYPLLADQ FTCFISPGTQHVS >gi|299856413|gb|ADWV01000038.1| GENE 23 25310 - 27709 2031 799 aa, chain - ## HITS:1 COG:ECs2094_1 KEGG:ns NR:ns ## COG: ECs2094_1 COG2202 # Protein_GI_number: 15831348 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 705 100.0 0 MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDML IPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLA LVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQ PDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQN LVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGM PIHWASSSHGAEVQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAA LALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDS LGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSK PIMIDDKPFPLTLSIGISYDVGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKE RLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPQHGHVPPSRFIPLAEE IGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGID GHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKID KSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSR PLPAEEIPGWMSSVLPLKI >gi|299856413|gb|ADWV01000038.1| GENE 24 27734 - 29116 1199 460 aa, chain - ## HITS:1 COG:ECs2095_2 KEGG:ns NR:ns ## COG: ECs2095_2 COG2199 # Protein_GI_number: 15831349 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli O157:H7 # 269 460 1 192 192 367 100.0 1e-101 MEMYFKRMKDEWTGLVEQADPFIRAKAAEIALAHAHYLSIEFYRIVRIDPHAEEFLSNEQ VERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILY PVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEE EKERQIASILSWEIDIIYKVLLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISR LIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVL TKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAF YDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSI GAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL >gi|299856413|gb|ADWV01000038.1| GENE 25 29488 - 30642 738 384 aa, chain - ## HITS:1 COG:ECs2096 KEGG:ns NR:ns ## COG: ECs2096 COG1649 # Protein_GI_number: 15831350 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 384 56 439 439 759 99.0 0 MRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLGINTVFFQVKPDGT ALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFNPYRVSVNTKPGTIR ELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITSIVAEVVSRYPVDGVQFD DYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEFGVSP AGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQELLDYIAPQIYWPFSRSAARYDVLA KWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMINGGVPELKKQLDLNDAVPEISGTIL FREDYLNKPQTQQAVSYLQSRWGS >gi|299856413|gb|ADWV01000038.1| GENE 26 30938 - 32473 1605 511 aa, chain - ## HITS:1 COG:xasA KEGG:ns NR:ns ## COG: xasA COG0531 # Protein_GI_number: 16129451 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 1 511 1 511 511 895 100.0 0 MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVFFLLLGGILWFIPVGLC AAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKW PALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLH SGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLL LMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLG VLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGVPVTLVISQLVITSIALIILTNTG GGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGL LTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHDRKGKANTGVTLE PINSQNAPKGHFFLHPRARSPHYIVMNDKKH >gi|299856413|gb|ADWV01000038.1| GENE 27 32629 - 32883 377 84 aa, chain - ## HITS:1 COG:ECs2098 KEGG:ns NR:ns ## COG: ECs2098 COG0076 # Protein_GI_number: 15831352 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Escherichia coli O157:H7 # 1 84 383 466 466 179 98.0 8e-46 EDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYK ASLKYLSDHPKLQGIAQQNSFKHT Prediction of potential genes in microbial genomes Time: Sun May 15 15:57:15 2011 Seq name: gi|299856412|gb|ADWV01000039.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont38.1, whole genome shotgun sequence Length of sequence - 32336 bp Number of predicted genes - 28, with homology - 28 Number of transcription units - 11, operones - 7 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 14/0.000 + CDS 2 - 421 645 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 447 - 494 8.9 + Prom 512 - 571 6.0 2 1 Op 2 46/0.000 + CDS 651 - 1034 450 ## COG0690 Preprotein translocase subunit SecE 3 1 Op 3 45/0.000 + CDS 1036 - 1581 664 ## COG0250 Transcription antiterminator + Term 1615 - 1667 10.2 + Prom 1589 - 1648 6.1 4 2 Op 1 55/0.000 + CDS 1740 - 2168 705 ## PROTEIN SUPPORTED gi|15804573|ref|NP_290614.1| 50S ribosomal protein L11 5 2 Op 2 43/0.000 + CDS 2172 - 2876 1148 ## PROTEIN SUPPORTED gi|15804574|ref|NP_290615.1| 50S ribosomal protein L1 6 2 Op 3 47/0.000 + CDS 3289 - 3786 798 ## PROTEIN SUPPORTED gi|15804575|ref|NP_290616.1| 50S ribosomal protein L10 7 2 Op 4 28/0.000 + CDS 3853 - 4218 562 ## PROTEIN SUPPORTED gi|15804576|ref|NP_290617.1| 50S ribosomal protein L7/L12 + Term 4229 - 4277 8.6 + Prom 4322 - 4381 2.6 8 3 Op 1 58/0.000 + CDS 4538 - 8566 4095 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 + Term 8586 - 8625 8.9 9 3 Op 2 . + CDS 8643 - 12866 4878 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 12893 - 12918 -0.5 + Prom 12897 - 12956 4.2 10 4 Tu 1 . + CDS 13079 - 13618 206 ## B21_03818 hypothetical protein + Term 13753 - 13793 5.6 - Term 13871 - 13915 4.3 11 5 Op 1 5/0.333 - CDS 14028 - 15161 1048 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 12 5 Op 2 16/0.000 - CDS 15158 - 15928 728 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 13 5 Op 3 5/0.333 - CDS 15930 - 16130 253 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis 14 5 Op 4 3/0.667 - CDS 16114 - 16869 748 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 15 5 Op 5 8/0.000 - CDS 16862 - 17497 687 ## COG0352 Thiamine monophosphate synthase 16 5 Op 6 4/0.667 - CDS 17497 - 19392 2059 ## COG0422 Thiamine biosynthesis protein ThiC - Prom 19561 - 19620 3.5 - Term 19561 - 19589 -0.7 17 6 Tu 1 . - CDS 19624 - 20100 498 ## COG3160 Regulator of sigma D - Prom 20154 - 20213 3.2 + Prom 19917 - 19976 2.8 18 7 Op 1 5/0.333 + CDS 20195 - 20968 561 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 19 7 Op 2 4/0.667 + CDS 21008 - 22072 1167 ## COG0407 Uroporphyrinogen-III decarboxylase 20 7 Op 3 4/0.667 + CDS 22082 - 22753 606 ## COG1515 Deoxyinosine 3'endonuclease (endonuclease V) 21 7 Op 4 6/0.000 + CDS 22796 - 23386 592 ## COG3068 Uncharacterized protein conserved in bacteria + Prom 23409 - 23468 1.8 22 7 Op 5 . + CDS 23573 - 23845 424 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 23873 - 23906 3.8 23 8 Tu 1 . + CDS 23918 - 24553 486 ## ECO111_4818 hypothetical protein + Term 24783 - 24817 -0.7 24 9 Tu 1 . - CDS 24555 - 24980 408 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein - Prom 25058 - 25117 2.0 + Prom 25009 - 25068 3.5 25 10 Op 1 13/0.000 + CDS 25227 - 26594 1152 ## COG0642 Signal transduction histidine kinase 26 10 Op 2 . + CDS 26591 - 27916 1398 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - Term 27826 - 27869 3.7 27 11 Op 1 17/0.000 - CDS 27913 - 29202 1637 ## COG0151 Phosphoribosylamine-glycine ligase 28 11 Op 2 . - CDS 29214 - 30803 1837 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) - Prom 30898 - 30957 3.6 + SSU_RRNA 31418 - 32336 99.0 # CP000800 [D:4263705..4265246] # 16S ribosomal RNA # Escherichia coli E24377A # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. Predicted protein(s) >gi|299856412|gb|ADWV01000039.1| GENE 1 2 - 421 645 139 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 138 269 406 407 253 86 1e-66 CTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKD EGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRF AIREGGRTVGAGVVAKVLS >gi|299856412|gb|ADWV01000039.1| GENE 2 651 - 1034 450 127 aa, chain + ## HITS:1 COG:STM4147 KEGG:ns NR:ns ## COG: STM4147 COG0690 # Protein_GI_number: 16767401 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Salmonella typhimurium LT2 # 1 127 1 127 127 184 96.0 4e-47 MSANTEAQGSGRGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLRALAVVILIAAAGGVAL LTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVS FITGLRF >gi|299856412|gb|ADWV01000039.1| GENE 3 1036 - 1581 664 181 aa, chain + ## HITS:1 COG:ECs4905 KEGG:ns NR:ns ## COG: ECs4905 COG0250 # Protein_GI_number: 15834159 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Escherichia coli O157:H7 # 1 181 1 181 181 348 100.0 3e-96 MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKS ERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGD KPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKVSVSIFGRATPVELDFSQVEK A >gi|299856412|gb|ADWV01000039.1| GENE 4 1740 - 2168 705 142 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804573|ref|NP_290614.1| 50S ribosomal protein L11 [Escherichia coli O157:H7 EDL933] # 1 142 1 142 142 276 100 2e-73 MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVIT VYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGA DIEAMTRSIEGTARSMGLVVED >gi|299856412|gb|ADWV01000039.1| GENE 5 2172 - 2876 1148 234 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804574|ref|NP_290615.1| 50S ribosomal protein L1 [Escherichia coli O157:H7 EDL933] # 1 234 1 234 234 446 100 1e-125 MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVR GATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDA MRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDF DADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLSASVN >gi|299856412|gb|ADWV01000039.1| GENE 6 3289 - 3786 798 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804575|ref|NP_290616.1| 50S ribosomal protein L10 [Escherichia coli O157:H7 EDL933] # 1 165 1 165 165 311 100 3e-84 MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLL RRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPA SQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRDAKEAA >gi|299856412|gb|ADWV01000039.1| GENE 7 3853 - 4218 562 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804576|ref|NP_290617.1| 50S ribosomal protein L7/L12 [Escherichia coli O157:H7 EDL933] # 1 121 1 121 121 221 100 6e-57 MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVEAAEEKTEFDVILK AAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEV K >gi|299856412|gb|ADWV01000039.1| GENE 8 4538 - 8566 4095 1342 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 2 1342 6 1390 1392 1582 58 0.0 MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQME LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDVKLIEVPVEYIAGKVVAKD YIDESTGELICAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETLRVDPTNDRL SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLREEIEGSGIL SKDDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT DEIHYLSAIEEGNYVIAQANSNLDEEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR GGVVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL SEELQILEAGLFSRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK LREFIQRAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLK LGDLPTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP ESFNVLLKEIRSLGINIELEDE >gi|299856412|gb|ADWV01000039.1| GENE 9 8643 - 12866 4878 1407 aa, chain + ## HITS:1 COG:ECs4911 KEGG:ns NR:ns ## COG: ECs4911 COG0086 # Protein_GI_number: 15834165 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Escherichia coli O157:H7 # 1 1407 1 1407 1407 2776 100.0 0 MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKM GAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERLYRSG LASLHARVKVRITEYEKDANGELVAKTSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKA ISKMLNTCYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAE VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFN SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVL GRVTAEDVLKPGTADILVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYG RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL SNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANW DPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKI VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR VADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE GERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM LRKATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFI SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEAPA APQVTAEDASASLAELLNAGLGGSDNE >gi|299856412|gb|ADWV01000039.1| GENE 10 13079 - 13618 206 179 aa, chain + ## HITS:1 COG:no KEGG:B21_03818 NR:ns ## KEGG: B21_03818 # Name: htrC # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 179 1 179 179 347 100.0 1e-94 MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYRFWVTYSLHCFTKDYEH QTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPESNVIHAGYGSYAVIEVDLD GGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVKFFTIAYNLLRNKQLPQPSK >gi|299856412|gb|ADWV01000039.1| GENE 11 14028 - 15161 1048 377 aa, chain - ## HITS:1 COG:ECs4913 KEGG:ns NR:ns ## COG: ECs4913 COG1060 # Protein_GI_number: 15834167 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Escherichia coli O157:H7 # 1 377 1 377 377 762 98.0 0 MKTFSDRWRQLDWDDIRLRINGKTAVDVERALNASQFTRDDMMALLSPAASGYLEQLAQR AQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKRKTLDEADIARESAAIREM GFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQPLAETEYAELKQLGLDGVMV YQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDNWRVDCYMVA EHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQTICAFRLLAPEIELSLST RESPWFRDRVIPLAINNVSAFSKTQPGGYADNHPELEQFSPHDDRRPEAVAAALTAQGLQ PVWKDWDSYLGRASQRL >gi|299856412|gb|ADWV01000039.1| GENE 12 15158 - 15928 728 256 aa, chain - ## HITS:1 COG:thiG KEGG:ns NR:ns ## COG: thiG COG2022 # Protein_GI_number: 16131821 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Escherichia coli K12 # 1 256 26 281 281 469 99.0 1e-132 MLRIADKTFDSHLFTGTGKFASSQLMVEAIRASGSQLVTLAMKRVDLRQHNDAILEPLIA AGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAEMLV QQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVV DAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVNMAKAFRLAVEAGLLARQSGPGSRSH FAHATSPLTGFLEASA >gi|299856412|gb|ADWV01000039.1| GENE 13 15930 - 16130 253 66 aa, chain - ## HITS:1 COG:ZthiS KEGG:ns NR:ns ## COG: ZthiS COG2104 # Protein_GI_number: 15804582 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Escherichia coli O157:H7 EDL933 # 1 66 1 66 66 92 96.0 2e-19 MQILFNDQPMQCAAGQTVHELLEQLDQRQAGAALAINQQIVPREQWTQHIVQDGDQILLF QVIAGG >gi|299856412|gb|ADWV01000039.1| GENE 14 16114 - 16869 748 251 aa, chain - ## HITS:1 COG:thiF KEGG:ns NR:ns ## COG: thiF COG0476 # Protein_GI_number: 16131822 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Escherichia coli K12 # 7 251 1 245 245 443 99.0 1e-124 MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADD DDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARAD VVLDCTDNMATRQEINAACVVLNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEP ERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGC PVCGGSNADPV >gi|299856412|gb|ADWV01000039.1| GENE 15 16862 - 17497 687 211 aa, chain - ## HITS:1 COG:ECs4916 KEGG:ns NR:ns ## COG: ECs4916 COG0352 # Protein_GI_number: 15834170 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Escherichia coli O157:H7 # 1 211 1 211 211 395 99.0 1e-110 MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRRDEEVEADVVAAIALGR RYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAGLRLGVSTHDDMEIDVALA ARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYPTVAIGGISLARAPAVIATGV GSIAVVSAITQAADWRLATAQLLEIAGVGDE >gi|299856412|gb|ADWV01000039.1| GENE 16 17497 - 19392 2059 631 aa, chain - ## HITS:1 COG:thiC KEGG:ns NR:ns ## COG: thiC COG0422 # Protein_GI_number: 16131824 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Escherichia coli K12 # 1 631 1 631 631 1308 99.0 0 MSATKLTRREQRAHAQHFIDTLEGTAFPNSKRIYITGTHPGVRVPMREIQLSPTLIGGSK EQPQYEENEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWIDARGDTEELTVRSSDYTKA RLADDGLDELRFSGVLTPKRAKAGRRVTQLHYARQGIITPEMEFIAIRENMGRERIRSEV LRHQHPGMSFGARLPENITAEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL EKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMA KWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELT KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDY AATQTIEMGMADMSENFRARGGEIYLRKEEA >gi|299856412|gb|ADWV01000039.1| GENE 17 19624 - 20100 498 158 aa, chain - ## HITS:1 COG:ECs4918 KEGG:ns NR:ns ## COG: ECs4918 COG3160 # Protein_GI_number: 15834172 # Func_class: K Transcription # Function: Regulator of sigma D # Organism: Escherichia coli O157:H7 # 1 158 1 158 158 305 100.0 3e-83 MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQS LVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNY LEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA >gi|299856412|gb|ADWV01000039.1| GENE 18 20195 - 20968 561 257 aa, chain + ## HITS:1 COG:yjaD KEGG:ns NR:ns ## COG: yjaD COG2816 # Protein_GI_number: 16131826 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Escherichia coli K12 # 1 257 1 257 257 531 99.0 1e-151 MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQ RRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSHCR ERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESG IKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTV ARRLIEDTVAMCRAEYE >gi|299856412|gb|ADWV01000039.1| GENE 19 21008 - 22072 1167 354 aa, chain + ## HITS:1 COG:hemE KEGG:ns NR:ns ## COG: hemE COG0407 # Protein_GI_number: 16131827 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Escherichia coli K12 # 1 354 1 354 354 736 100.0 0 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDE LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHA LLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDG RRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVHRLSEQYHR >gi|299856412|gb|ADWV01000039.1| GENE 20 22082 - 22753 606 223 aa, chain + ## HITS:1 COG:nfi KEGG:ns NR:ns ## COG: nfi COG1515 # Protein_GI_number: 16131828 # Func_class: L Replication, recombination and repair # Function: Deoxyinosine 3'endonuclease (endonuclease V) # Organism: Escherichia coli K12 # 1 223 3 225 225 441 99.0 1e-124 MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEVTRAAMVLLKYPSLELV EYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFVDGHGISHPRRLGVASHFG LMVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLAWVWRSKARCNPLFIATGHRV SVDSALAWVQRCMKGYRLPEPTRWADAVASERPAFVRYTANQP >gi|299856412|gb|ADWV01000039.1| GENE 21 22796 - 23386 592 196 aa, chain + ## HITS:1 COG:yjaG KEGG:ns NR:ns ## COG: yjaG COG3068 # Protein_GI_number: 16131829 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 196 1 196 196 384 100.0 1e-107 MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLT VKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVS KTSITTVAMLEMTQAGREMSDEELKENPAVEQEWDIQWEIFRLLAECEERDIELIKGLRA DLREAGESNIGIIFQQ >gi|299856412|gb|ADWV01000039.1| GENE 22 23573 - 23845 424 90 aa, chain + ## HITS:1 COG:STM4170 KEGG:ns NR:ns ## COG: STM4170 COG0776 # Protein_GI_number: 16767424 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Salmonella typhimurium LT2 # 1 90 1 90 90 135 98.0 1e-32 MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG RNPQTGKEIKIAAANVPAFVSGKALKDAVK >gi|299856412|gb|ADWV01000039.1| GENE 23 23918 - 24553 486 211 aa, chain + ## HITS:1 COG:no KEGG:ECO111_4818 NR:ns ## KEGG: ECO111_4818 # Name: yjaH # Def: hypothetical protein # Organism: E.coli_O111_H- # Pathway: not_defined # 1 211 21 231 231 417 100.0 1e-115 MLAGALFLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTR EYRWQGDNLTLININVYSKPPVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRA AQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDV SVAWLEAPEGSQLLLVANSDFCRWQPNEKTF >gi|299856412|gb|ADWV01000039.1| GENE 24 24555 - 24980 408 141 aa, chain - ## HITS:1 COG:ECs4925 KEGG:ns NR:ns ## COG: ECs4925 COG3678 # Protein_GI_number: 15834179 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Escherichia coli O157:H7 # 1 141 48 188 188 219 100.0 1e-57 MKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHNDFYAQSS ALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDELRVKRDIAMAEAGIPRG AGMGMGYGGCGGGGHMGMGHW >gi|299856412|gb|ADWV01000039.1| GENE 25 25227 - 26594 1152 455 aa, chain + ## HITS:1 COG:ECs4926 KEGG:ns NR:ns ## COG: ECs4926 COG0642 # Protein_GI_number: 15834180 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 455 4 458 458 860 98.0 0 MQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAAARQTLLEKGSVLIRALESG SRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQGTIVMHSNSGMVGKQLYSPQEMQQ LHPGDEEAWRRIDSADGEPVLEIYRQFQPMFAAGMHRMRHMQQYAATPQAIFIAFDASNI VSAEDREQRNTLIILFALATVLLASVLSFFWYRRYLRSRQLLQDEMKRKEKLVALGHLAA GVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQLAQVMAKEADRLNRVVSELLELVKPTHL ALQAVDLNTLINHSLQLVSQDANSREIQLRFTANDTLPEIQADPDRLTQVLLNLYLNAIQ AIGQHGVISVTVSESGAGVKISVTDSGKGIAADQLEAIFTPYFTTKAEGTGLGLAVVHNI VEQHGGTIQVASQEGKGSTFTLWLPVNITRKDPQG >gi|299856412|gb|ADWV01000039.1| GENE 26 26591 - 27916 1398 441 aa, chain + ## HITS:1 COG:hydG KEGG:ns NR:ns ## COG: hydG COG2204 # Protein_GI_number: 16131834 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli K12 # 1 441 1 441 441 831 99.0 0 MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMA EMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKA LAHTHSIDAETPAVTASQFGMVGKSSAMQHLLSEIALVAPSEATVLIHGDSGTGKELVAR AIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLD EIGDISPMMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYY RLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRE LENAVERAVVLLTGEYISERELPLAIASTPIPLGQSQDIQPLVEVEKEVILAALEKTGGN KTEAARQLGITRKTLLAKLSR >gi|299856412|gb|ADWV01000039.1| GENE 27 27913 - 29202 1637 429 aa, chain - ## HITS:1 COG:purD KEGG:ns NR:ns ## COG: purD COG0151 # Protein_GI_number: 16131835 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Escherichia coli K12 # 1 429 1 429 429 849 99.0 0 MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQNVAIGVTDIPALLDFA QNEKIDLTIVGPEAPLVKGVVDTFRAAGLKIFGPTAGAAQLEGSKAFTKDFLARHKIPTA EYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMTLEEAEAAVHDMLAGNAFGDA GHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRVGDKDTGPNTGGMGAYSPAPVVT DDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMIDKQGNPKVIEFNCRFGDPETQPIM LRMKSDLVELCLAACEGKLDEKTSEWDERASLGVVMAAGGYPGDYRTGDVIHGLPLEEVA DGKVFHAGTKLADDEQVVTNGGRVLCVTALGHTVAEAQKRAYALMTDIHWDDCFCRKDIG WRAIEREQN >gi|299856412|gb|ADWV01000039.1| GENE 28 29214 - 30803 1837 529 aa, chain - ## HITS:1 COG:ECs4929 KEGG:ns NR:ns ## COG: ECs4929 COG0138 # Protein_GI_number: 15834183 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Escherichia coli O157:H7 # 1 529 1 529 529 1031 99.0 0 MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLLAEKGLPVTEVSDYTGF PEMMDGRVKTLHPKVHGGILGRRGQDDAIMEEHQIQPIDMVVVNLYPFAQTVAREGCSLE DAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEMDDNEGSLTLATRFDLAIKAF EHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNLNFIKKQDMRYGENSHQQAAFYI EENVKEASVATATQVQGKALSYNNIADTDAALECVKEFAEPACVIVKHANPCGVAIGNSI LDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAIISRQFVEVIIAPSASEEALKITAAKQ NVRVLTCGQWGERVPGLDFKRVNGGLLVQDRDLGMVGAEELRVVTQRQPTEQELRDALFC WKVAKFVKSNAIVYAKNNMTIGIGAGQMSRVYSAKIAGIKAADEGLEVKGSSMASDAFFP FRDGIDAAAAAGVTCVIQPGGSIRDDEVIAAADEHGIAMLFTDMRHFRH Prediction of potential genes in microbial genomes Time: Sun May 15 15:57:32 2011 Seq name: gi|299856411|gb|ADWV01000040.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont39.1, whole genome shotgun sequence Length of sequence - 30976 bp Number of predicted genes - 27, with homology - 27 Number of transcription units - 18, operones - 3 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 2 - 78 96.0 # AE017194 [D:4654188..4655695] # 5S ribosomal RNA # Bacillus cereus ATCC 10987 # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group. + 5S_RRNA 145 - 206 93.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + TRNA 293 - 368 59.8 # Glu TTC 0 0 + LSU_RRNA 542 - 3467 99.0 # CP000800 [R:2875908..2878833] # 23S ribosomal RNA # Escherichia coli E24377A # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. + 5S_RRNA 3548 - 3678 98.0 # EU285519 [D:5957..6097] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. + TRNA 3871 - 3947 90.7 # Asp GTC 0 0 + Prom 3874 - 3933 80.4 1 1 Tu 1 . + CDS 4110 - 4913 1102 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 4922 - 4955 3.8 - Term 4832 - 4874 7.1 2 2 Tu 1 . - CDS 4910 - 5824 497 ## COG0583 Transcriptional regulator - Prom 5865 - 5924 4.1 + Prom 5947 - 6006 5.7 3 3 Op 1 4/0.625 + CDS 6086 - 6865 495 ## COG3021 Uncharacterized protein conserved in bacteria 4 3 Op 2 . + CDS 6943 - 7713 494 ## COG0500 SAM-dependent methyltransferases + Term 7722 - 7754 3.0 - Term 7695 - 7753 6.5 5 4 Tu 1 8/0.375 - CDS 7761 - 8981 738 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 9093 - 9152 1.5 6 5 Tu 1 . - CDS 9191 - 9946 377 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 10112 - 10171 2.7 + Prom 9890 - 9949 3.8 7 6 Tu 1 . + CDS 9980 - 10702 333 ## COG0500 SAM-dependent methyltransferases - Term 10634 - 10688 6.0 8 7 Tu 1 . - CDS 10699 - 11166 526 ## COG0328 Ribonuclease HI - Prom 11189 - 11248 2.1 + Prom 11127 - 11186 4.3 9 8 Tu 1 . + CDS 11222 - 11962 722 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Term 12196 - 12240 9.3 + TRNA 12095 - 12171 90.7 # Asp GTC 0 0 + Prom 12397 - 12456 6.7 10 9 Tu 1 . + CDS 12502 - 13287 574 ## EC55989_0216 putative aminopeptidase - Term 13340 - 13377 -0.1 11 10 Op 1 . - CDS 13424 - 13903 -42 ## ECO103_0211 hypothetical protein 12 10 Op 2 . - CDS 13913 - 14827 123 ## ECO103_0212 hypothetical protein 13 10 Op 3 2/1.000 - CDS 14871 - 15353 379 ## COG3157 Hemolysin-coregulated protein (uncharacterized) 14 10 Op 4 . - CDS 15377 - 16081 790 ## COG3515 Uncharacterized protein conserved in bacteria 15 10 Op 5 . - CDS 16083 - 17468 1077 ## COG3517 Uncharacterized protein conserved in bacteria 16 10 Op 6 . - CDS 17519 - 17743 156 ## SSON_0253 hypothetical protein 17 10 Op 7 . - CDS 17778 - 18278 471 ## COG3516 Uncharacterized protein conserved in bacteria 18 11 Tu 1 3/0.750 + CDS 18975 - 19493 606 ## COG3157 Hemolysin-coregulated protein (uncharacterized) + Term 19504 - 19545 10.2 19 12 Op 1 3/0.750 + CDS 19703 - 21844 1526 ## COG3501 Uncharacterized protein conserved in bacteria 20 12 Op 2 5/0.500 + CDS 21920 - 24424 1268 ## COG3209 Rhs family protein 21 12 Op 3 . + CDS 24318 - 25583 410 ## COG3209 Rhs family protein + Prom 25684 - 25743 7.8 22 13 Tu 1 . + CDS 25816 - 26049 144 ## ECO103_0232 hypothetical protein + Term 26128 - 26169 7.6 + Prom 26137 - 26196 5.2 23 14 Tu 1 2/1.000 + CDS 26230 - 26976 331 ## COG5433 Transposase + Prom 27380 - 27439 7.5 24 15 Tu 1 . + CDS 27552 - 28595 173 ## COG5433 Transposase 25 16 Tu 1 . - CDS 28637 - 29407 618 ## COG0388 Predicted amidohydrolase - Prom 29468 - 29527 6.7 + Prom 29459 - 29518 3.9 26 17 Tu 1 . + CDS 29561 - 30034 561 ## EC55989_0244 C-lysozyme inhibitor + Term 30051 - 30081 3.0 - Term 30038 - 30068 3.0 27 18 Tu 1 . - CDS 30077 - 30976 1207 ## COG1960 Acyl-CoA dehydrogenases Predicted protein(s) >gi|299856411|gb|ADWV01000040.1| GENE 1 4110 - 4913 1102 267 aa, chain + ## HITS:1 COG:yafB KEGG:ns NR:ns ## COG: yafB COG0656 # Protein_GI_number: 16128194 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Escherichia coli K12 # 1 267 1 267 267 505 98.0 1e-143 MAIPAFGLGTFRLKDDVVISSVKTALELGYRAIDTAQIYDNEAAVGQAIAESGVPRHELY ITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQ GLTREIGISNFTIPLMEKTIAAVGAENIATNQIELSPYLQNRKVVVWAKQHGIHITSYMT LAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRENLESNLKAQNLQLD AEDKKAIAALDCNDRLVSPEGLAPEWD >gi|299856411|gb|ADWV01000040.1| GENE 2 4910 - 5824 497 304 aa, chain - ## HITS:1 COG:yafC KEGG:ns NR:ns ## COG: yafC COG0583 # Protein_GI_number: 16128195 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli K12 # 1 304 1 304 304 577 100.0 1e-164 MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLT EEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVLHFLMPLIKPFRERYP EVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLFNSYRKIIASPDYISRYGKPE TIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGLSSNSGETLKQLCLSGNGIACLS DYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEHVKTAPGGA VREA >gi|299856411|gb|ADWV01000040.1| GENE 3 6086 - 6865 495 259 aa, chain + ## HITS:1 COG:ECs0205 KEGG:ns NR:ns ## COG: ECs0205 COG3021 # Protein_GI_number: 15829459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 259 8 266 266 512 100.0 1e-145 MRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERIRILVWNIYKQQRAEWLSVLKNYG KDAHLVLLQEAQTTPELVQFATANYLAADQVPAFVLPQHPSGVMTLSAAHPVYCCPLRER EPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVYSKQLLPIGDQIAHHSGPVIM AGDFNAWSRRRMNALYRFAREMSLRQVRFTDDQRRRAFGRPLDFVFYRGLNVSEASVLVT RASDHNPLLVEFSPGKPDK >gi|299856411|gb|ADWV01000040.1| GENE 4 6943 - 7713 494 256 aa, chain + ## HITS:1 COG:ECs0206 KEGG:ns NR:ns ## COG: ECs0206 COG0500 # Protein_GI_number: 15829460 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 1 256 1 256 256 477 97.0 1e-135 MTTQSHHDHVEKQFSSQASEYLTSTVHASGRDLQRLAVRLADYPGASVLDMGCGAGHASF VAAQNVSTVVAYDLSAQMLDVVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSA HHWHDVGAALREVNRILKPGGRMIVMDVMSPGHPVRDIWLQTVEALRDTSHVRNYASGEW LRLINEANLIVDNLITDKLPLEFSSWVARMRTPEALVDAIRIYQQSASTEVRTYFALQND GSFTSDIIMVEAHKAA >gi|299856411|gb|ADWV01000040.1| GENE 5 7761 - 8981 738 406 aa, chain - ## HITS:1 COG:dniR KEGG:ns NR:ns ## COG: dniR COG0741 # Protein_GI_number: 16128198 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Escherichia coli K12 # 1 406 47 452 452 775 100.0 0 MDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIA GQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDV VASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQE TKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLK TFNAGVKGSTLGASGPQYVMVPKKHADQLRESLASGEIAAVQSTLVADNTPLNSRVYTVR SGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVRK GDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMPDS >gi|299856411|gb|ADWV01000040.1| GENE 6 9191 - 9946 377 251 aa, chain - ## HITS:1 COG:ECs0208 KEGG:ns NR:ns ## COG: ECs0208 COG0491 # Protein_GI_number: 15829462 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 515 99.0 1e-146 MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLKAIAANNWQPEAIFLTHHHHDHVG GVKELVEKFPQIVVYGPPETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYFSK PYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILP HDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEER FAWLRSKKDRF >gi|299856411|gb|ADWV01000040.1| GENE 7 9980 - 10702 333 240 aa, chain + ## HITS:1 COG:yafS KEGG:ns NR:ns ## COG: yafS COG0500 # Protein_GI_number: 16128200 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 240 7 246 246 484 99.0 1e-137 MKPARVPQTVVAPDCWGDLPWGELYRKALERQLNPWFTKMYGFHLLKIGNLSAEINCEAC AVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPWCTDPHRLLREADRVLIDD GWLVISGFNPISLMGLRKLVPVLRKTSPYNSRMFTLMRQLDWLSLLNFEVLHASRFHVLP WNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQSKNKPRIRQAVGATRQCRKPQA >gi|299856411|gb|ADWV01000040.1| GENE 8 10699 - 11166 526 155 aa, chain - ## HITS:1 COG:ECs0210 KEGG:ns NR:ns ## COG: ECs0210 COG0328 # Protein_GI_number: 15829464 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Escherichia coli O157:H7 # 1 155 1 155 155 314 100.0 5e-86 MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALK EHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEW VKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV >gi|299856411|gb|ADWV01000040.1| GENE 9 11222 - 11962 722 246 aa, chain + ## HITS:1 COG:dnaQ KEGG:ns NR:ns ## COG: dnaQ COG0847 # Protein_GI_number: 16128202 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Escherichia coli K12 # 4 246 1 243 243 484 99.0 1e-137 MTAMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRL VDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRD IPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLA MTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFATDEELAAHEARLDLVEKKGG SCLWRA >gi|299856411|gb|ADWV01000040.1| GENE 10 12502 - 13287 574 261 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0216 NR:ns ## KEGG: EC55989_0216 # Name: yafT # Def: putative aminopeptidase # Organism: E.coli_55989 # Pathway: not_defined # 1 261 1 261 261 490 100.0 1e-137 MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQSNINKNTPQQLTDKDLFGNETTLA VSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMRKYYTVSTFSGIPDRQKPL TCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIVYQDTLQTGKYDSALKSTVWS DYKNEKLTDAISLRYLVRFTLVDVATGEWATWSPVNYEYKVLPPLPDKNEASTTDMTEQQ IMQLKQKTYKAMVKDLVNRYQ >gi|299856411|gb|ADWV01000040.1| GENE 11 13424 - 13903 -42 159 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0211 NR:ns ## KEGG: ECO103_0211 # Name: ykfM # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 159 1 159 159 276 99.0 2e-73 MRLHVKLKEFLSMFFMAILFFPAFNASLFFTGVKPLYSIIKCSTEIFYDWRMLILCFGFM SFSFLNVHVILLTIIKSFLIKKTKVVNFATDITIQLTLIFLLIAIVIAPLIAPFVTGYVN ANYHPCGNNTGIFPGAIYIKNGMKCNNEYISRKEDSAVK >gi|299856411|gb|ADWV01000040.1| GENE 12 13913 - 14827 123 304 aa, chain - ## HITS:1 COG:no KEGG:ECO103_0212 NR:ns ## KEGG: ECO103_0212 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 304 1 304 304 633 100.0 1e-180 MAGLRNNNNTQNAQWADYVGDILRGAQPINQLVPQHPYLNDVPLIDELRHQNTHHVILLT LDVAKKILSPITSFDYIHFITTHPSGIKDTLAWLVNAGKLMTEFDDNGKIIFNLNALKYT KASYFEILGEKYIKITTSSPWLLEKLGKYIFSSRAPQVLELAIGWRGALSESIKGVKFCI WFSVAWRTIEFIMSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVIL VGGAILLTGIVCTVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNT PPVI >gi|299856411|gb|ADWV01000040.1| GENE 13 14871 - 15353 379 160 aa, chain - ## HITS:1 COG:ECs0216 KEGG:ns NR:ns ## COG: ECs0216 COG3157 # Protein_GI_number: 15829470 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Escherichia coli O157:H7 # 1 159 1 158 159 182 54.0 2e-46 MANISYLSLSGETQGLISAGCSTLDSVGNKAQPEHKDQIMVYALMHSISRSQNVNHHELI ITKPVDKSSPLLAKALSDNEKMAICEFILYRTSKAGIYQPYYKINLSKARISSIDFVTPH AVLEKELEPQERIAFIYEDISWEHTLAGTNAMSKWQDRVQ >gi|299856411|gb|ADWV01000040.1| GENE 14 15377 - 16081 790 234 aa, chain - ## HITS:1 COG:Z0249 KEGG:ns NR:ns ## COG: Z0249 COG3515 # Protein_GI_number: 15799898 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 224 247 470 499 403 99.0 1e-112 MKVEVRSLTENPPQASVIKQGSTVRGFIAGIACSVAVASALWWWQVYPVQQQLLQVNDTA QGAATVWMASPELENYERRLQQLLDTSPVQPLETGMQMMRVADSRWPESLQQQQASTQWN EALKTRAQSSPQLRGWLQTRQDLHAFADLVMQREKEGLTLSYIKNVIWQAERGLGQETPV ESLLTQYQDARAQKQNTDALEKQINERLEGVLSRWLLLKNNVMPEAATGTTAEK >gi|299856411|gb|ADWV01000040.1| GENE 15 16083 - 17468 1077 461 aa, chain - ## HITS:1 COG:ECs0231 KEGG:ns NR:ns ## COG: ECs0231 COG3517 # Protein_GI_number: 15829485 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 443 1 443 463 899 99.0 0 MSLQEEELVSSHAGQPEQASSLLDQIMAQTRIQPGSEGYDVARQGVTAFIASILQSTASA EPVNKLAVDSMIADIDERISRQMDVIIHAPAFQQVESFWRSLKTMVDRVDFRENIKVNVL HVTKQELLEDFEFAPEIIQSGFYKHVYSSGFGQFGGEPIAAVLGAYEFKNTAPDMKLLQY VSAVGAMAHAPFLSSVSPEFMGLNSWTELPNIKDLYAIFEGPAYTKWRALRDSEDSRYLG LTAPRFLLRQPYSPTDNPVKNFNYYEDVSQNHEDYLWGNTAWMLACNIADSFAKYRWCPN IIGPQSGGAVKDLPVHLFETMGQIQAKIPTEVLVTDRREFELAEEGFITLTMRKDSDNAA FFSANSVQKPKHFPGKDAETNYKLGTQLPYLFIINRLAHYIKVLQREQLGSWKERSDLER ELNTWIRQYVADQENPPADVRSRNTGIFHTRSGSASPARPA >gi|299856411|gb|ADWV01000040.1| GENE 16 17519 - 17743 156 74 aa, chain - ## HITS:1 COG:no KEGG:SSON_0253 NR:ns ## KEGG: SSON_0253 # Name: not_defined # Def: hypothetical protein # Organism: S.sonnei # Pathway: not_defined # 1 74 1 74 74 138 100.0 6e-32 MTAHKNISGTYHLSVADILQVVYQVCFSPSVEINQDGVAALITTLDRRISDLLDEIIHFC EFQQSASHWQRVLH >gi|299856411|gb|ADWV01000040.1| GENE 17 17778 - 18278 471 166 aa, chain - ## HITS:1 COG:ECs0233 KEGG:ns NR:ns ## COG: ECs0233 COG3516 # Protein_GI_number: 15829487 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 166 1 166 166 288 98.0 3e-78 MSKKFEGSVAPRERINISYVPKTDGQTAEVELPLNMLVVGDTGNTQETSPLDERQAVSVN KHNFGAVMAEAAIGLNFTVPATLKGSTTDDELNVALNIKSLDDFSPDSVARQVPEVNKLL ELREALTALKGPMGNLPAFRTQLQALLENEESREQLLKEIGQVSNK >gi|299856411|gb|ADWV01000040.1| GENE 18 18975 - 19493 606 172 aa, chain + ## HITS:1 COG:ECs0234 KEGG:ns NR:ns ## COG: ECs0234 COG3157 # Protein_GI_number: 15829488 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Escherichia coli O157:H7 # 1 172 1 172 172 348 100.0 2e-96 MPTPCYISITGQTQGNITAGAFTADSVGNIYVQGHEDEMLVQEFLHNVTVPTDPQSGQPA GQRAHKPFIFTVALNKAVPLMYNALASGEMLPTTELHWWRTSVEGKQEHYFTTRLTDSTI VDMKLHMPHCQDPAKREFTQLLEVSLAYRKIEWEHVKSGTSGADDWRAPLEA >gi|299856411|gb|ADWV01000040.1| GENE 19 19703 - 21844 1526 713 aa, chain + ## HITS:1 COG:Z0267 KEGG:ns NR:ns ## COG: Z0267 COG3501 # Protein_GI_number: 15799916 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 1 713 1 713 713 1429 98.0 0 MSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSLEFQQILDKMAYL TIWQGDDVQRRVKGVVTWFELGENDKNQMLYSMKVCPPLWRTGLRQNFRIFQNEDIESIL ATILKENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRMAAEEGIFFYEEHAQKSTDQS LVLCDTVRYLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTKDYTFKRPGWAGR FDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVARGTSRSPEIWPGR RIVLTGHPQANLNREWQVVASDLHGEQPQAIPGRRGSGTTLDNHFAVIPADRTWRPQPLL KPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKFNWDRYNPSNQDSSCWIRVAQAWAGTGFG NLAIPRVGQEVIVDFLNGDPDQPIIMGRTYHQENRTPGSLPGTKTQMTIRSKTYKGSGFN ELKFDDATGKEQVYIHAQKNMNTEVLNNRTTDVINNHAEKIGNNQAITVTNNQIQNIGVN QIQTVGVNQVETVGSNQIIKVGSNQVEKVGIIRALTVGVAYQTTVGGIMNTSVALLQSSQ VGLHKSLMVGMGYSVNVGNNVTFSVGKTMKENTGQTAVYSAGEHLELCCGKARLVLTKDG SIFLNGTHIHLEGESDVNGDAPVINWNCGATQPVPDAPVPKDLPPGMPDMRQF >gi|299856411|gb|ADWV01000040.1| GENE 20 21920 - 24424 1268 834 aa, chain + ## HITS:1 COG:Z0268 KEGG:ns NR:ns ## COG: Z0268 COG3209 # Protein_GI_number: 15799917 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 EDL933 # 3 769 2 765 1404 1350 92.0 0 MGGGKPAARQGDMTRKGLDIVQGSAGVLIGAPTGVACSVCPTKKDSPNYGSPVNPLLGAK VLPVETDLALPGPLPFILFRAYSSYRTRTPAPVGVFGPGWKAPFDIRLQIRDEGLILNDS GGRSIHFEPLFPGEISYSRSESLWLARGGVAAQHSSQPLSALWQVLPEDVRLSPHVYLAT NSLQGPWWILSWPERVPGADEVLPPPPPAYRVLTGVVDGFGRTLAFHRAAKGDVAGAVTG VTDGAGRRFHLALTTQAQRAEAFRKQRASSLSSPASPRSVSSSQVFPDTLPAGTEYGADN GIRLEAVWLTHDPAYPDEQPTAPLARYTYTAGGELRAVYDRSGMQVRGFTYDAEHAGRMV AHHYAGRPESCYRYDDTGRVTEQVNPEGLDYRFEYGESRVIITDSLNRREVLYTEGEGGL KRVVKKEHADGSITRSEYDEAGRLKAQTDAAGRRTEYRLHMASGAVTAVTGPDGRTVRYG YNSQRQVTSVTYPDGLRSSREYDERGRLTAETSRSGETTRYSYDDPASELPTGIQDATGS TKQMAWSRYGQLLAFTDCSGYTTRYEYDRYGQQTAVHREEGISTYSSYNPRGQLVSQRDA QGRETRYEYSAAGDLTATVSPDGKRSTIEYDKRGRPVSVTEGGLTRSMGYDAAGRITVLT NENGSQSTFRYDPVDRLTEQRGFDGRTQRYQYDLTGKLTQSEDEGLITLWHYDASDRITR RTVNGEPAEQWQYDDHGWLTEISHLSEGHRVAVHYGYDDKGRLTGERQTDGEDGPHPDGC YPDGRRADPPLPLRQPAPPGVPHADTAWRATGREPLPLRPAGTANGETGMAAGA >gi|299856411|gb|ADWV01000040.1| GENE 21 24318 - 25583 410 421 aa, chain + ## HITS:1 COG:rhsE KEGG:ns NR:ns ## COG: rhsE COG3209 # Protein_GI_number: 16129415 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 1 421 262 682 682 817 92.0 0 MFHTRIQHGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLSRKPEETWYGWDGDRLT TVQTDTTRIQTVYQPGSFAPLIRIETDNGEREKAQCRSLAEKIQQEGSEDGHGVVFPAEL VGLLDRLEGEIRANCVSSESRQWLAQCGLTVERLAAQIEPVYLPERKIHLYHCDHRGLPL ALISEDGNTAWSAEYDEWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRHRYYDPLQG RYITPDPIGLRGGWNMYQYPLNPIQVIDPMGLDAIENMTSGGLIYAVSGVPGLIAANSIT NSAYQFGYDMDAIVGGAHNGAADAMRHCYLMCRMTKTFGSTIADVIGKNHEAAGDRQGQP AKERIMDLKNNTVGIACGDFSAKCSDACIEKYNTGQLFGLDGIKADNPIKTKQGSSDASN Y >gi|299856411|gb|ADWV01000040.1| GENE 22 25816 - 26049 144 77 aa, chain + ## HITS:1 COG:no KEGG:ECO103_0232 NR:ns ## KEGG: ECO103_0232 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 77 84 160 160 106 98.0 3e-22 MVDINLNFFNDILYSVRLKNISKLENMEFCAKKQRVYFSDKNKKASYKIINYGDYYDVDY YDNNLKNEVFDWIGKWS >gi|299856411|gb|ADWV01000040.1| GENE 23 26230 - 26976 331 248 aa, chain + ## HITS:1 COG:b1458 KEGG:ns NR:ns ## COG: b1458 COG5433 # Protein_GI_number: 16129417 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 248 1 248 248 467 99.0 1e-131 MSIQSLLDYISVIPDIRQQGKVKHKLSAILFLTVCAVIAGADEWQEIEDFGHERLEWLKK YGDFDNGIPVDDTIARVVSNIDSLAFEKMFIEWMQECHEITDGEIIAIDGKTIRGSFDKG KRKGAIHMVSAFSNENGVVLGQVKTEAKSNEITAIPELLNLLYLKKNLITIDAMGCQKDI ASKIKDKKADYLLAVKGNQGKLHHAFEEKFPVNVFSNYKGDSFSTQEISHGRKETRLHIV SNVTPELL >gi|299856411|gb|ADWV01000040.1| GENE 24 27552 - 28595 173 347 aa, chain + ## HITS:1 COG:yhhI KEGG:ns NR:ns ## COG: yhhI COG5433 # Protein_GI_number: 16131356 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 347 32 378 378 692 97.0 0 MTIFAVISGAESWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFI NWMRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIRTDEKSNE ITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFP LKELNNPEHDSYAMSEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIA EQKKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAE LFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAESGLS >gi|299856411|gb|ADWV01000040.1| GENE 25 28637 - 29407 618 256 aa, chain - ## HITS:1 COG:ECs0246 KEGG:ns NR:ns ## COG: ECs0246 COG0388 # Protein_GI_number: 15829500 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 1 256 1 256 256 528 99.0 1e-150 MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQD DVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHY KAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYYLAIYVANWPAPRSLHWQALLTAR AIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMVALREY REKFPAWQDADEFRLR >gi|299856411|gb|ADWV01000040.1| GENE 26 29561 - 30034 561 157 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0244 NR:ns ## KEGG: EC55989_0244 # Name: ivy # Def: C-lysozyme inhibitor # Organism: E.coli_55989 # Pathway: not_defined # 1 157 1 157 157 292 100.0 2e-78 MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQGHKLPAWV MKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTSQE KLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK >gi|299856411|gb|ADWV01000040.1| GENE 27 30077 - 30976 1207 299 aa, chain - ## HITS:1 COG:ECs0248 KEGG:ns NR:ns ## COG: ECs0248 COG1960 # Protein_GI_number: 15829502 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli O157:H7 # 2 299 529 826 826 608 99.0 1e-174 GHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRY YQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAVLKRYDDEGRNE ADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVA KILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQRICKELGKNLPFTRL DELAHNALAKGLIDKDEAAILVKAEESRLRSINVDDFDPEELATKPVKLPEKVRKVEAA Prediction of potential genes in microbial genomes Time: Sun May 15 15:57:59 2011 Seq name: gi|299856410|gb|ADWV01000041.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont40.1, whole genome shotgun sequence Length of sequence - 28370 bp Number of predicted genes - 26, with homology - 26 Number of transcription units - 10, operones - 6 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 75 - 224 58 ## SbBS512_E1227 hypothetical protein 2 1 Op 2 7/0.000 - CDS 281 - 2710 2552 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 3 1 Op 3 1/1.000 - CDS 2735 - 3835 561 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit - Prom 4021 - 4080 8.7 - Term 4176 - 4211 2.0 4 2 Op 1 3/1.000 - CDS 4223 - 4969 386 ## COG3142 Uncharacterized protein involved in copper resistance 5 2 Op 2 . - CDS 4983 - 5549 393 ## COG3102 Uncharacterized protein conserved in bacteria - Prom 5573 - 5632 4.1 + Prom 5647 - 5706 4.1 6 3 Tu 1 2/1.000 + CDS 5765 - 7498 2291 ## COG0018 Arginyl-tRNA synthetase + Term 7515 - 7561 10.2 + Prom 7520 - 7579 4.4 7 4 Tu 1 . + CDS 7675 - 8163 188 ## COG3755 Uncharacterized protein conserved in bacteria - Term 8075 - 8120 -1.0 8 5 Op 1 . - CDS 8283 - 8675 168 ## B21_01838 hypothetical protein 9 5 Op 2 13/0.000 - CDS 8675 - 10753 2088 ## COG1298 Flagellar biosynthesis pathway, component FlhA 10 5 Op 3 4/1.000 - CDS 10746 - 11894 1129 ## COG1377 Flagellar biosynthesis pathway, component FlhB - Prom 12002 - 12061 2.8 11 6 Op 1 8/0.000 - CDS 12096 - 12740 797 ## COG3143 Chemotaxis protein 12 6 Op 2 18/0.000 - CDS 12751 - 13140 547 ## COG0784 FOG: CheY-like receiver 13 6 Op 3 13/0.000 - CDS 13155 - 14204 824 ## COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 14 6 Op 4 9/0.000 - CDS 14207 - 15067 649 ## COG1352 Methylase of chemotaxis methyl-accepting proteins 15 6 Op 5 13/0.000 - CDS 15086 - 16687 1679 ## COG0840 Methyl-accepting chemotaxis protein 16 6 Op 6 17/0.000 - CDS 16733 - 18394 1489 ## COG0840 Methyl-accepting chemotaxis protein - Prom 18440 - 18499 3.8 - Term 18475 - 18513 4.5 17 6 Op 7 20/0.000 - CDS 18539 - 19042 622 ## COG0835 Chemotaxis signal transduction protein 18 6 Op 8 5/0.500 - CDS 19063 - 21021 1639 ## COG0643 Chemotaxis protein histidine kinase and related kinases 19 6 Op 9 19/0.000 - CDS 21032 - 21958 714 ## COG1360 Flagellar motor protein 20 6 Op 10 . - CDS 21955 - 22842 987 ## COG1291 Flagellar motor component - Term 22905 - 22942 7.2 21 7 Op 1 . - CDS 22969 - 23547 376 ## ECSP_2465 transcriptional activator FlhC 22 7 Op 2 . - CDS 23550 - 23900 257 ## EC55989_2071 transcriptional activator FlhD - Prom 24098 - 24157 4.5 23 8 Tu 1 . + CDS 24680 - 25108 407 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 25160 - 25189 2.5 24 9 Op 1 8/0.000 - CDS 25115 - 26539 1250 ## COG0380 Trehalose-6-phosphate synthase 25 9 Op 2 1/1.000 - CDS 26514 - 27314 665 ## COG1877 Trehalose-6-phosphatase - Prom 27367 - 27426 3.8 - Term 27405 - 27442 6.1 26 10 Tu 1 . - CDS 27481 - 28317 913 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components Predicted protein(s) >gi|299856410|gb|ADWV01000041.1| GENE 1 75 - 224 58 49 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E1227 NR:ns ## KEGG: SbBS512_E1227 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 6 49 183 226 226 85 95.0 7e-16 MRYAYQALYYPSSAEKIGQFSLPAVRMPYRALGSNLLRRFMQRTAFLPK >gi|299856410|gb|ADWV01000041.1| GENE 2 281 - 2710 2552 809 aa, chain - ## HITS:1 COG:bisZ KEGG:ns NR:ns ## COG: bisZ COG0243 # Protein_GI_number: 16129825 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 809 7 815 815 1618 98.0 0 MTLTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRWGAMNVEVKDGKIVSST GALAKTIPNSLQSTAADQVHTTTRIQHPMVRKSYLDNPLQPTKGRGEDTYVQVSWEQALK LIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQRYMNLAGGYSGHSGDYSTGAA QVIMPHVVGSVEVYEQQTSWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLK KSGKPVIAIDPIRSETIDFFGDNATWIAPNMGTDVALMLGIAHTLMTQGKHDKVFLEKYT TGYPQFEEYLRGKSDNTPKSAAWAAEITGVPEAQIVKLAELMAANRTMLMAGWGIQRQQY GEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYSNGGNPTRVGGVLPEMSAAIAGQASEAAD DGGMRAIPVARIVDALENPGGKYQHNGKEQTYPNIKMIWWAGGGNFTHHQDTNRLIKAWQ KPEMIVVSECYWTAAAKHADIVLPITTSFERNDLTMTGDYSNQHIVPMKQAVAPQFEARN DFDVFADLAELLKPGGKEIYTEGKDEMAWLKFFYDAAQKGARAQRVTMPMFNVFWQQNKL IEMRRSEKNEQYVRYGDFRADPVKNALGTPSGKIEIYSKTLEKFGYKDCPAHPTWLAPDE WKGTADEKQLQLLTAHPAHRLHSQLNYAGLRKKYAVADREPITIHTEDAARFGIANGDLV RVWNKRGQILTGAVVTDGIKKGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQLANAC AGNSALVYIEKYTGNAPKLTAFDKPAVQA >gi|299856410|gb|ADWV01000041.1| GENE 3 2735 - 3835 561 366 aa, chain - ## HITS:1 COG:ECs2583 KEGG:ns NR:ns ## COG: ECs2583 COG3005 # Protein_GI_number: 15831837 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Escherichia coli O157:H7 # 1 366 1 366 366 727 98.0 0 MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHSMSKPFEEYQGTVHFSN QKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDSDDKFETHRQEMAETVWKE LKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKGGETCIDCHKGIAHFPPEIKMDDN AAHELESQAATSVTNGAHIYPFKTSRIGELATVNPGTDLTVVDASGKQPIVLLQGYQMQG SENTLYLAAGQRLALATLSEEGIKALTVNGEWQADEYGNQWRQASLQGALTVPALADRKP LWQYAEKLDDTYCAGCHAPIAADHYTVNAWPSIAKGMGARTSMSENELDILTRYFQYNAK DITEKQ >gi|299856410|gb|ADWV01000041.1| GENE 4 4223 - 4969 386 248 aa, chain - ## HITS:1 COG:cutCm KEGG:ns NR:ns ## COG: cutCm COG3142 # Protein_GI_number: 16132223 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Escherichia coli K12 # 1 248 1 248 248 498 100.0 1e-141 MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRP RGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTF HRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAHRDAPIIMAGAGVR AENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSSDEHADEYSRYIVDGAAVAEMKG IIERHQAK >gi|299856410|gb|ADWV01000041.1| GENE 5 4983 - 5549 393 188 aa, chain - ## HITS:1 COG:yecM KEGG:ns NR:ns ## COG: yecM COG3102 # Protein_GI_number: 16129827 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 188 3 190 190 369 98.0 1e-102 MANWQSIDELQDIASDLPRFTHALDELSLRLGLNITPLTADHISLRCHQNATAERWRRGF EQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEKRYPHEGWEHIEIVLPG DPETLNARALALLSDEGLSLPGISVKTSSPKGEHERLPNPTLAVTDGKTTIKFHPWSIEE IVASEQSA >gi|299856410|gb|ADWV01000041.1| GENE 6 5765 - 7498 2291 577 aa, chain + ## HITS:1 COG:argS KEGG:ns NR:ns ## COG: argS COG0018 # Protein_GI_number: 16129828 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Escherichia coli K12 # 1 577 1 577 577 1148 99.0 0 MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGMMAVAKKLGMAPRQLAE QVLTHLDLNSIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVSTPEKQTIVVDYS APNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQEN AGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQ ITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPM GVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPE SVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKL ANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQ LAAAPVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPIL SAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM >gi|299856410|gb|ADWV01000041.1| GENE 7 7675 - 8163 188 162 aa, chain + ## HITS:1 COG:yecT KEGG:ns NR:ns ## COG: yecT COG3755 # Protein_GI_number: 16129829 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 162 8 169 169 311 99.0 4e-85 MFKFLVLTLGIISCQAYAEDTVIVNDHDISAIKDCWQKNSDDDTDVNVIKSCLRQEYNLV DAQLNKAYGEAYRYIEQVPRTGVKKPDTEQLNLLKKSQRAWLDFRDKECELILSNEDVQD LSDPYSESEWLSCMIIQTNTRTRQLQLYRNSEDFYPSPLTRG >gi|299856410|gb|ADWV01000041.1| GENE 8 8283 - 8675 168 130 aa, chain - ## HITS:1 COG:no KEGG:B21_01838 NR:ns ## KEGG: B21_01838 # Name: flhE # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 130 1 130 130 218 100.0 4e-56 MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLSTRQPASGLMTLVAWRY QLIGPTPSGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPLRFIWEVPGGGRLIPPLKV QRNEVIVNYR >gi|299856410|gb|ADWV01000041.1| GENE 9 8675 - 10753 2088 692 aa, chain - ## HITS:1 COG:flhA KEGG:ns NR:ns ## COG: flhA COG1298 # Protein_GI_number: 16129831 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhA # Organism: Escherichia coli K12 # 1 692 1 692 692 1266 99.0 0 MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFILDLLFTFNIALSIMVLL VAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHTGAAAAGKVVEAFGHFLVG GNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDE AKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVINVVGGLLVGVLQHGMSMGHAAE SYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQDVGEQMVNQLFSNPSVMLLSAAVLG LLGLVPGMPNLVFLLFTAGLLGLAWWIRGREQKAPAEPKPVKMAENNTVVEATWNDVQLE DSLGMEVGYRLIPMVDFQQDGELLGRIRSIRKKFAQEMGFLPPVVHIRDNMDLQPARYRI LMKGVEIGSGDAYPGRWLAINPGTAAGTLPGEATVDPAFGLNAIWIESALKEQAQIQGYT VVEASTVVATHLNHLISQHAAELFGRQEAQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKV LQNLLDEKVPIRDMRTILETLAEHAPIQSDPHELTAVVRVALGRAITQQWFPGKDEVHVI GLDTPLERLLLQALQGGGGLEPGLADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSR FLRRSLPQLVVLSNLELSDNRHIRMTATIGGK >gi|299856410|gb|ADWV01000041.1| GENE 10 10746 - 11894 1129 382 aa, chain - ## HITS:1 COG:flhB KEGG:ns NR:ns ## COG: flhB COG1377 # Protein_GI_number: 16129832 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flagellar biosynthesis pathway, component FlhB # Organism: Escherichia coli K12 # 1 382 1 382 382 695 100.0 0 MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGML SAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSL QPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPIT AMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVK GRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRI REIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRP VQPTHLPVPEALDFINEKPTHE >gi|299856410|gb|ADWV01000041.1| GENE 11 12096 - 12740 797 214 aa, chain - ## HITS:1 COG:cheZ KEGG:ns NR:ns ## COG: cheZ COG3143 # Protein_GI_number: 16129833 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein # Organism: Escherichia coli K12 # 1 214 1 214 214 345 100.0 3e-95 MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEAAEAIPDARDRLYYVVQ MTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPIDLADARELVTDTRQFLAD VPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIERQLLMVLLENIPEQESRPKR ENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF >gi|299856410|gb|ADWV01000041.1| GENE 12 12751 - 13140 547 129 aa, chain - ## HITS:1 COG:ECs2592 KEGG:ns NR:ns ## COG: ECs2592 COG0784 # Protein_GI_number: 15831846 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Escherichia coli O157:H7 # 1 129 1 129 129 234 100.0 4e-62 MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNM PNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKL NKIFEKLGM >gi|299856410|gb|ADWV01000041.1| GENE 13 13155 - 14204 824 349 aa, chain - ## HITS:1 COG:cheB KEGG:ns NR:ns ## COG: cheB COG2201 # Protein_GI_number: 16129835 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain # Organism: Escherichia coli K12 # 1 349 1 349 349 655 99.0 0 MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKFNPDVLTLDVEMP RMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAIDFVTKPQLGIREGMLAYS EMIAEKVRTAAKASLAAHKPLSAPTTLKAGPLLSSEKLIAIGASTGGTEAIRHVLQPLPL SSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGERVLPGHAYIAPGDRHMELSRSG ANYQIKIHDGPAVNRHRPSVDVLFHSVAKQAGRNAVGVILTGMGNDGAAGMLAMRQAGAW TLAQNEASCVVFGMPREAINMGGVCEVVDLSQVSQQMLAKISAGQAIRI >gi|299856410|gb|ADWV01000041.1| GENE 14 14207 - 15067 649 286 aa, chain - ## HITS:1 COG:cheR KEGG:ns NR:ns ## COG: cheR COG1352 # Protein_GI_number: 16129836 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methylase of chemotaxis methyl-accepting proteins # Organism: Escherichia coli K12 # 1 286 1 286 286 570 99.0 1e-163 MTSSLPCGQTSLLLQMTERLALSDAHFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRS LGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARRRSGEYRVW SAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNLTPQQ LQRYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQNT QQEILRRFVPLLKPDGLLFAGHSENFSHLERRFTLRGQTVYALSKD >gi|299856410|gb|ADWV01000041.1| GENE 15 15086 - 16687 1679 533 aa, chain - ## HITS:1 COG:tap KEGG:ns NR:ns ## COG: tap COG0840 # Protein_GI_number: 16129837 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli K12 # 1 533 1 533 533 829 99.0 0 MFNRIRISTTLFLILILCGILQIGSNGMSFWAFRDDLQRLNQVEQSNQQRAALAQTRAVM LQASTALNKAGTLTALSYPADDIKTLMTTARASLTQSTTLFKSFMAMTAGNEHVRALQKE TEKSFARWHNDLEHQATWLESNQLSDFLTAPVQESQNAFDVNFEAWQLKINHVLEAASAQ SQRNYQISALVFISMIIVAAIYISSALWWTRKMIVQPLAIIGSHFDSIAAGNLARPIAVY GRNEITAIFASLKTMQQALRGTVSDVRKGSQEMHIGIAEIVAGNNDLSSRTEQQAASLAQ TAASMEQLTATVGQNADNARQASELAKNAATTAQAGGVQVSTMTHTMQEIATSSQKIGDI ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKGLIEES VNRVQQGSKLVNNAAATMIDIVSSVTRVNDIMGEIASASEEQQRGIEQVAQAVSQMDQVT QQNASLVEEAAVATEQLANQADHLSSRVAVFTLEEHEVARHESAQLQIAPVVS >gi|299856410|gb|ADWV01000041.1| GENE 16 16733 - 18394 1489 553 aa, chain - ## HITS:1 COG:tar KEGG:ns NR:ns ## COG: tar COG0840 # Protein_GI_number: 16129838 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Escherichia coli K12 # 1 553 1 553 553 895 99.0 0 MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLM LQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEMVATS RNIDEKYKNYHTALTELIDYLDYGNTGAYFAQPTQGMQNAMGEAFAQYALSSEKLYRDIV TDNADDYRFAQWQLAVIALVVVLILLVAWYGIRRMLLTPLAKIIAHIREIAGGNLANTLT IDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASAL EETAASMEQLTATVKQNADNARQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIA DIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIE DSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDR VTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLAASPLTNKPQTPSRPASEQPPAQPR LRIAEQDPNWETF >gi|299856410|gb|ADWV01000041.1| GENE 17 18539 - 19042 622 167 aa, chain - ## HITS:1 COG:ECs2597 KEGG:ns NR:ns ## COG: ECs2597 COG0835 # Protein_GI_number: 15831851 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis signal transduction protein # Organism: Escherichia coli O157:H7 # 1 167 1 167 167 290 99.0 6e-79 MTGMTNVTNLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTN LRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAP EFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLDSAASEVA >gi|299856410|gb|ADWV01000041.1| GENE 18 19063 - 21021 1639 652 aa, chain - ## HITS:1 COG:cheA KEGG:ns NR:ns ## COG: cheA COG0643 # Protein_GI_number: 16129840 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein histidine kinase and related kinases # Organism: Escherichia coli K12 # 1 652 3 654 654 1192 99.0 0 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAVHSIKGGAGTFGFSVL QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA LRQLALEAKGETQSAVTRLSVVAKSEPQDEQNRSQSPRRIILSRLKAGEVDLLEEELGHL TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG AGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAERVTDVSGRGVGMDVVKRNI QEMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA >gi|299856410|gb|ADWV01000041.1| GENE 19 21032 - 21958 714 308 aa, chain - ## HITS:1 COG:ECs2599 KEGG:ns NR:ns ## COG: ECs2599 COG1360 # Protein_GI_number: 15831853 # Func_class: N Cell motility # Function: Flagellar motor protein # Organism: Escherichia coli O157:H7 # 1 308 1 308 308 587 100.0 1e-168 MKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAE YFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRG DLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIA PVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVG MAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALEKPEVAPQVSVP TMPSAEPR >gi|299856410|gb|ADWV01000041.1| GENE 20 21955 - 22842 987 295 aa, chain - ## HITS:1 COG:motA KEGG:ns NR:ns ## COG: motA COG1291 # Protein_GI_number: 16129842 # Func_class: N Cell motility # Function: Flagellar motor component # Organism: Escherichia coli K12 # 1 295 1 295 295 547 100.0 1e-156 MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKA LPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADS VMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAA VMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQC VKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQTTTEEA >gi|299856410|gb|ADWV01000041.1| GENE 21 22969 - 23547 376 192 aa, chain - ## HITS:1 COG:no KEGG:ECSP_2465 NR:ns ## KEGG: ECSP_2465 # Name: flhC # Def: transcriptional activator FlhC # Organism: E.coli_O157_TW14359 # Pathway: Two-component system [PATH:etw02020]; Flagellar assembly [PATH:etw02040] # 1 192 1 192 192 385 100.0 1e-106 MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFS TDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQCPQAEEGPLLALTRA WTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPSRAVKRRKLSQNPADII PQLLDEQRVQAV >gi|299856410|gb|ADWV01000041.1| GENE 22 23550 - 23900 257 116 aa, chain - ## HITS:1 COG:no KEGG:EC55989_2071 NR:ns ## KEGG: EC55989_2071 # Name: flhD # Def: transcriptional activator FlhD # Organism: E.coli_55989 # Pathway: Two-component system [PATH:eck02020]; Flagellar assembly [PATH:eck02040] # 1 116 4 119 119 196 100.0 3e-49 MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAET NQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA >gi|299856410|gb|ADWV01000041.1| GENE 23 24680 - 25108 407 142 aa, chain + ## HITS:1 COG:ECs2603 KEGG:ns NR:ns ## COG: ECs2603 COG0589 # Protein_GI_number: 15831857 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 142 1 142 142 265 97.0 2e-71 MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSV MQEETQSFLDKLIQDAGYLVDKTFIAYGELSEHILEVCHKHHFDLVICGNHNHSFFSRAS CSAKRVIASSEVDVLLVPLTGD >gi|299856410|gb|ADWV01000041.1| GENE 24 25115 - 26539 1250 474 aa, chain - ## HITS:1 COG:otsA KEGG:ns NR:ns ## COG: otsA COG0380 # Protein_GI_number: 16129848 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphate synthase # Organism: Escherichia coli K12 # 1 474 1 474 474 959 100.0 0 MSRLVVVSNRIAPPDEHAASAGGLAVGILGALKAAGGLWFGWSGETGNEDQPLKKVKKGN ITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPL LQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDY DLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGP LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTS RGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMS LAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPRSAESQQRDKVATFPKLA >gi|299856410|gb|ADWV01000041.1| GENE 25 26514 - 27314 665 266 aa, chain - ## HITS:1 COG:ECs2605 KEGG:ns NR:ns ## COG: ECs2605 COG1877 # Protein_GI_number: 15831859 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphatase # Organism: Escherichia coli O157:H7 # 1 266 1 266 266 531 99.0 1e-151 MTEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATASDGALALIS GRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTVIAQYPGA ELETKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQQGKCVVEIKPRGTSKGEAIA AFMQEAPFIGRTPVFLGDDLTDESGFAVVNRLGGMSVKIGTGATQASWRLAGVPDVWSWL EMITTALQQKRENNRSDDYESFSRSI >gi|299856410|gb|ADWV01000041.1| GENE 26 27481 - 28317 913 278 aa, chain - ## HITS:1 COG:YPO2257 KEGG:ns NR:ns ## COG: YPO2257 COG1172 # Protein_GI_number: 16122481 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Yersinia pestis # 1 278 72 349 349 433 93.0 1e-121 MKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESLWIGVAAGL LLGILCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDESFFALGYANW FGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGL VSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVE NAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV Prediction of potential genes in microbial genomes Time: Sun May 15 15:58:17 2011 Seq name: gi|299856409|gb|ADWV01000042.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont41.1, whole genome shotgun sequence Length of sequence - 24235 bp Number of predicted genes - 26, with homology - 26 Number of transcription units - 20, operones - 5 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 99 - 143 9.2 1 1 Op 1 40/0.000 - CDS 202 - 1575 1585 ## COG0642 Signal transduction histidine kinase 2 1 Op 2 . - CDS 1572 - 2270 888 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 2327 - 2386 2.1 + Prom 2334 - 2393 2.0 3 2 Tu 1 . + CDS 2420 - 2920 296 ## COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein + Term 2961 - 2991 4.3 + Prom 2940 - 2999 5.2 4 3 Tu 1 . + CDS 3069 - 3971 603 ## COG0053 Predicted Co/Zn/Cd cation transporters + Term 4019 - 4066 1.3 + Prom 4013 - 4072 4.2 5 4 Tu 1 . + CDS 4152 - 5114 1255 ## COG0205 6-phosphofructokinase + Term 5298 - 5330 2.3 + Prom 5335 - 5394 6.2 6 5 Tu 1 . + CDS 5434 - 6423 1277 ## COG1613 ABC-type sulfate transport system, periplasmic component + Term 6433 - 6495 1.8 + Prom 6447 - 6506 4.8 7 6 Tu 1 . + CDS 6530 - 7285 569 ## COG2134 CDP-diacylglycerol pyrophosphatase - Term 7296 - 7330 5.2 8 7 Tu 1 . - CDS 7340 - 8107 897 ## COG0149 Triosephosphate isomerase - Term 8133 - 8163 2.1 9 8 Tu 1 . - CDS 8215 - 8814 603 ## B21_03754 hypothetical protein - Prom 8838 - 8897 5.8 + Prom 8832 - 8891 2.5 10 9 Tu 1 3/0.833 + CDS 8915 - 9355 484 ## COG3152 Predicted membrane protein + Prom 9472 - 9531 3.3 11 10 Op 1 3/0.833 + CDS 9567 - 9866 381 ## COG3691 Uncharacterized protein conserved in bacteria 12 10 Op 2 . + CDS 9893 - 10321 404 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 10352 - 10404 4.6 13 11 Op 1 4/0.167 - CDS 10326 - 11072 883 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Term 11113 - 11148 5.1 14 11 Op 2 4/0.167 - CDS 11169 - 12179 1384 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins - Prom 12204 - 12263 3.1 15 12 Op 1 18/0.000 - CDS 12315 - 13823 1908 ## COG0554 Glycerol kinase 16 12 Op 2 . - CDS 13846 - 14691 782 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) - Prom 14797 - 14856 5.3 17 13 Tu 1 . + CDS 15122 - 15361 528 ## COG3074 Uncharacterized protein conserved in bacteria + Term 15423 - 15451 1.0 - Term 15407 - 15443 2.3 18 14 Tu 1 7/0.167 - CDS 15446 - 15931 573 ## COG0684 Demethylmenaquinone methyltransferase - Prom 15957 - 16016 6.7 19 15 Tu 1 6/0.167 - CDS 16024 - 16950 1088 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase - Term 16955 - 16988 2.9 20 16 Op 1 24/0.000 - CDS 17017 - 18348 1202 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 21 16 Op 2 7/0.167 - CDS 18358 - 18888 630 ## COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit - Prom 18908 - 18967 1.7 - Term 18912 - 18943 4.1 22 16 Op 3 6/0.167 - CDS 18981 - 19835 705 ## COG3087 Cell division protein - Prom 19970 - 20029 2.3 23 17 Tu 1 . - CDS 20032 - 21057 866 ## COG1609 Transcriptional regulators - Prom 21146 - 21205 4.5 24 18 Tu 1 . - CDS 21213 - 23411 2354 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase - Prom 23436 - 23495 2.8 + Prom 23494 - 23553 5.2 25 19 Tu 1 . + CDS 23614 - 23826 384 ## PROTEIN SUPPORTED gi|15804527|ref|NP_290567.1| 50S ribosomal protein L31 + Term 23830 - 23893 5.0 + Prom 23900 - 23959 3.2 26 20 Tu 1 . + CDS 23986 - 24235 174 ## COG3209 Rhs family protein Predicted protein(s) >gi|299856409|gb|ADWV01000042.1| GENE 1 202 - 1575 1585 457 aa, chain - ## HITS:1 COG:ECs4837 KEGG:ns NR:ns ## COG: ECs4837 COG0642 # Protein_GI_number: 15834091 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 1 457 1 457 457 816 100.0 0 MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIEQHVEAELAND PPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEMQIIRNFIGQADNADHPQK KKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLL WLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQ RLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQK NALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRN ALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLG LAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKRS >gi|299856409|gb|ADWV01000042.1| GENE 2 1572 - 2270 888 232 aa, chain - ## HITS:1 COG:ECs4838 KEGG:ns NR:ns ## COG: ECs4838 COG0745 # Protein_GI_number: 15834092 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 1 232 1 232 232 410 100.0 1e-114 MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLLDVMMPKKNGI DTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHW SEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVSREH LSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS >gi|299856409|gb|ADWV01000042.1| GENE 3 2420 - 2920 296 166 aa, chain + ## HITS:1 COG:ECs4839 KEGG:ns NR:ns ## COG: ECs4839 COG3678 # Protein_GI_number: 15834093 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; N Cell motility; T Signal transduction mechanisms; P Inorganic ion transport and metabolism # Function: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein # Organism: Escherichia coli O157:H7 # 1 151 2 152 167 211 100.0 5e-55 MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQSHMFDGISLTEHQRQQMR DLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQAEKMANEQIARQVEMAKVRNQM YRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSLKLLSSSNSRSQ >gi|299856409|gb|ADWV01000042.1| GENE 4 3069 - 3971 603 300 aa, chain + ## HITS:1 COG:ECs4840 KEGG:ns NR:ns ## COG: ECs4840 COG0053 # Protein_GI_number: 15834094 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Escherichia coli O157:H7 # 1 300 1 300 300 558 100.0 1e-159 MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVV RYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIV TIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLSWYGWHRADA LFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTSWPGVSGAHDLRTRQSG PTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSVVPREGKRSMLS >gi|299856409|gb|ADWV01000042.1| GENE 5 4152 - 5114 1255 320 aa, chain + ## HITS:1 COG:ECs4841 KEGG:ns NR:ns ## COG: ECs4841 COG0205 # Protein_GI_number: 15834095 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Escherichia coli O157:H7 # 1 320 1 320 320 634 100.0 0 MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSD MINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPC IGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSSHQRISVVEVMGRYCGDLTLA AAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITEHMCDVDELAHFIEKETG RETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLLLAGYGGRCVGIQNEQLVHHDIIDA IENMKRPFKGDWLDCAKKLY >gi|299856409|gb|ADWV01000042.1| GENE 6 5434 - 6423 1277 329 aa, chain + ## HITS:1 COG:sbp KEGG:ns NR:ns ## COG: sbp COG1613 # Protein_GI_number: 16131755 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Escherichia coli K12 # 1 329 1 329 329 649 100.0 0 MNKWGVGLTFLLAATSVMAKDIQLLNVSYDPTRELYEQYNKAFSAHWKQQTGDNVVIRQS HGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWIKRLPDNSAPYTSTIVFLV RKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAQDFVRA LYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLAANELGKDKFEIVTPSESILAEP TVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAKNYYRPRDAEVAKKYENAFPKLKLF TIDEEFGGWTKAQKEHFANGGTFDQISKR >gi|299856409|gb|ADWV01000042.1| GENE 7 6530 - 7285 569 251 aa, chain + ## HITS:1 COG:ECs4843 KEGG:ns NR:ns ## COG: ECs4843 COG2134 # Protein_GI_number: 15834097 # Func_class: I Lipid transport and metabolism # Function: CDP-diacylglycerol pyrophosphatase # Organism: Escherichia coli O157:H7 # 1 251 1 251 251 514 100.0 1e-146 MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLPNQQQNQNPSPCAEVKP NAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVP DRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLPGGLRGHEYLAR RVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQSDNSFVLLATQRNLLTLNRASAE EIQDHQCEILR >gi|299856409|gb|ADWV01000042.1| GENE 8 7340 - 8107 897 255 aa, chain - ## HITS:1 COG:ECs4844 KEGG:ns NR:ns ## COG: ECs4844 COG0149 # Protein_GI_number: 15834098 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 454 100.0 1e-128 MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIM LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQG LTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATP AQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKAD AFAVIVKAAEAAKQA >gi|299856409|gb|ADWV01000042.1| GENE 9 8215 - 8814 603 199 aa, chain - ## HITS:1 COG:no KEGG:B21_03754 NR:ns ## KEGG: B21_03754 # Name: yiiQ # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 199 1 199 199 349 100.0 3e-95 MKPGCTLFFLLCSALTVTTTAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSL PLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIKSIQMTWLPIQGPEQKAAK AKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYYTETEGALRYVVADNGEKGLT FAVEPIKLALSESLEGLNK >gi|299856409|gb|ADWV01000042.1| GENE 10 8915 - 9355 484 146 aa, chain + ## HITS:1 COG:ECs4846 KEGG:ns NR:ns ## COG: ECs4846 COG3152 # Protein_GI_number: 15834100 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 146 1 146 146 258 98.0 3e-69 MTIQQWLFSFKGRIGRRDFWIWIGLWLAGMLVLFSLAGKNLLDIQTAAFCLVCLLWPTAA VTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVGRFVPTLILVMMLIDLGAF IGTQGENKYGKDTQDVKYKADNKSSN >gi|299856409|gb|ADWV01000042.1| GENE 11 9567 - 9866 381 99 aa, chain + ## HITS:1 COG:ECs4847 KEGG:ns NR:ns ## COG: ECs4847 COG3691 # Protein_GI_number: 15834101 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 99 1 99 99 160 100.0 6e-40 MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAAASSADEG ASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA >gi|299856409|gb|ADWV01000042.1| GENE 12 9893 - 10321 404 142 aa, chain + ## HITS:1 COG:yiiT KEGG:ns NR:ns ## COG: yiiT COG0589 # Protein_GI_number: 16131761 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli K12 # 1 142 1 142 142 280 100.0 4e-76 MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQ LLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLM PAYRGMINKMSADLLIVPFIDK >gi|299856409|gb|ADWV01000042.1| GENE 13 10326 - 11072 883 248 aa, chain - ## HITS:1 COG:ECs4849 KEGG:ns NR:ns ## COG: ECs4849 COG1018 # Protein_GI_number: 15834103 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 503 99.0 1e-142 MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEIDGERVQRAYSYVNSPDN PDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDEVPDCETLWMLATGTAIGP YLSILQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEKRYEGKLRIQTVVSRETAAGS LTGRIPALIESGELESAIGLPMNKETSHVMLCGNPQMVRDTQQLLKETRQMTKHLRRRPG HMTAEHYW >gi|299856409|gb|ADWV01000042.1| GENE 14 11169 - 12179 1384 336 aa, chain - ## HITS:1 COG:glpX KEGG:ns NR:ns ## COG: glpX COG1494 # Protein_GI_number: 16131763 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Escherichia coli K12 # 1 336 1 336 336 620 100.0 1e-177 MRRELAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIMLNQVNIDGTIVIGEGEI DEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALAVLAVGDKGCFLNAPDMYM EKLIVGPGAKGTIDLNLPLADNLRNVAAALGKPLSELTVTILAKPRHDAVIAEMQQLGVR VFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAVIRALDGDMNGRLLARHDVKG DNEENRRIGEQELARCKAMGIEAGKVLRLGDMARSDNVIFSATGITKGDLLEGISRKGNI ATTETLLIRGKSRTIRRIQSIHYLDRKDPEMQVHIL >gi|299856409|gb|ADWV01000042.1| GENE 15 12315 - 13823 1908 502 aa, chain - ## HITS:1 COG:ECs4851 KEGG:ns NR:ns ## COG: ECs4851 COG0554 # Protein_GI_number: 15834105 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Escherichia coli O157:H7 # 1 502 1 502 502 1023 100.0 0 MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSST LVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDG LEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVH VTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPI SGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVN YALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPY ARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLM QFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTER NYRYAGWKKAVKRAMAWEEHDE >gi|299856409|gb|ADWV01000042.1| GENE 16 13846 - 14691 782 281 aa, chain - ## HITS:1 COG:ECs4852 KEGG:ns NR:ns ## COG: ECs4852 COG0580 # Protein_GI_number: 15834106 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Escherichia coli O157:H7 # 1 281 1 281 281 533 100.0 1e-151 MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTA GVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHH IVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAP LLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGP IVGAIVGAFAYRKLIGRHLPCDICVVEEKETTTPSEQKASL >gi|299856409|gb|ADWV01000042.1| GENE 17 15122 - 15361 528 79 aa, chain + ## HITS:1 COG:ECs4853 KEGG:ns NR:ns ## COG: ECs4853 COG3074 # Protein_GI_number: 15834107 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 79 3 81 81 85 100.0 2e-17 MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKE QQNGWQERLQALLGRMEEV >gi|299856409|gb|ADWV01000042.1| GENE 18 15446 - 15931 573 161 aa, chain - ## HITS:1 COG:ECs4856 KEGG:ns NR:ns ## COG: ECs4856 COG0684 # Protein_GI_number: 15834110 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Escherichia coli O157:H7 # 1 161 1 161 161 299 100.0 1e-81 MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRV LVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAA GEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDIE >gi|299856409|gb|ADWV01000042.1| GENE 19 16024 - 16950 1088 308 aa, chain - ## HITS:1 COG:menA KEGG:ns NR:ns ## COG: menA COG1575 # Protein_GI_number: 16131768 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Escherichia coli K12 # 1 308 1 308 308 572 100.0 1e-163 MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPLVALLALITAGLLQILS NLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIITVVLICLSGLALVAVACHT LADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLVFFGWLSVMGSWYLQAHTLIP ALILPATACGLLATAVLNINNLRDINSDRENGKNTLVVRLGEVNARRYHACLLMGSLVCL ALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDPVAMRPMLERTVKGALLTNLLFVLG IFLSQWAA >gi|299856409|gb|ADWV01000042.1| GENE 20 17017 - 18348 1202 443 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 4 443 8 466 466 467 52 1e-131 MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTG VGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNR YRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEIDLAAA PMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKIKDAMKLLIEEEAAKLVNPEELK QDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTD HILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMA TEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQTIII DADYVSKHLDALVADEDLSRFIL >gi|299856409|gb|ADWV01000042.1| GENE 21 18358 - 18888 630 176 aa, chain - ## HITS:1 COG:ECs4859 KEGG:ns NR:ns ## COG: ECs4859 COG5405 # Protein_GI_number: 15834113 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease HslVU (ClpYQ), peptidase subunit # Organism: Escherichia coli O157:H7 # 1 176 1 176 176 332 100.0 3e-91 MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFEL FERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDL IAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELSYKA >gi|299856409|gb|ADWV01000042.1| GENE 22 18981 - 19835 705 284 aa, chain - ## HITS:1 COG:ECs4860 KEGG:ns NR:ns ## COG: ECs4860 COG3087 # Protein_GI_number: 15834114 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Escherichia coli O157:H7 # 1 284 36 319 319 389 99.0 1e-108 MVAIAAAVLVTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPG VRAPTEPSAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQR QRQAQQLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASTQQPYQDLLQTPA HTTAQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDS KITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG >gi|299856409|gb|ADWV01000042.1| GENE 23 20032 - 21057 866 341 aa, chain - ## HITS:1 COG:ECs4861 KEGG:ns NR:ns ## COG: ECs4861 COG1609 # Protein_GI_number: 15834115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 1 341 1 341 341 687 100.0 0 MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGR NVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLII TKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLY EQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPR YEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIRGSTRALP >gi|299856409|gb|ADWV01000042.1| GENE 24 21213 - 23411 2354 732 aa, chain - ## HITS:1 COG:priA KEGG:ns NR:ns ## COG: priA COG1198 # Protein_GI_number: 16131773 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Escherichia coli K12 # 1 732 1 732 732 1462 98.0 0 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNEL KAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQANNQ VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQCPSCG STHLVPVGLGTEQLEQTLAPLFPDVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI LSSPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRK VKWVLDVDPIEG >gi|299856409|gb|ADWV01000042.1| GENE 25 23614 - 23826 384 70 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15804527|ref|NP_290567.1| 50S ribosomal protein L31 [Escherichia coli O157:H7 EDL933] # 1 70 1 70 70 152 100 2e-36 MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRF NKRFNIPGSK >gi|299856409|gb|ADWV01000042.1| GENE 26 23986 - 24235 174 83 aa, chain + ## HITS:1 COG:ZrhsA KEGG:ns NR:ns ## COG: ZrhsA COG3209 # Protein_GI_number: 15804134 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 EDL933 # 1 83 1 83 1377 174 100.0 5e-44 MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPG ETDIALPGPLPFILSRTYSSYRT Prediction of potential genes in microbial genomes Time: Sun May 15 15:58:29 2011 Seq name: gi|299856408|gb|ADWV01000043.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont42.1, whole genome shotgun sequence Length of sequence - 20580 bp Number of predicted genes - 22, with homology - 22 Number of transcription units - 12, operones - 6 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 32 - 910 757 ## COG0061 Predicted sugar kinase - Prom 1032 - 1091 4.2 + Prom 599 - 658 2.6 2 2 Op 1 . + CDS 842 - 1036 154 ## EFER_0459 heat shock protein HSP70 cofactor (EC:5.1.3.1) 3 2 Op 2 . + CDS 1033 - 1626 948 ## COG0576 Molecular chaperone GrpE (heat shock protein) + Term 1649 - 1686 9.4 - Term 1634 - 1674 2.4 4 3 Op 1 4/0.400 - CDS 1681 - 2922 1319 ## COG4536 Putative Mg2+ and Co2+ transporter CorB 5 3 Op 2 . - CDS 2988 - 3779 672 ## COG4137 ABC-type uncharacterized transport system, permease component - Prom 3810 - 3869 3.9 + Prom 3830 - 3889 5.2 6 4 Op 1 23/0.000 + CDS 3946 - 5307 1666 ## COG0541 Signal recognition particle GTPase 7 4 Op 2 12/0.200 + CDS 5496 - 5804 524 ## PROTEIN SUPPORTED gi|110806723|ref|YP_690243.1| 30S ribosomal protein S16 8 4 Op 3 30/0.000 + CDS 5823 - 6371 189 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 9 4 Op 4 33/0.000 + CDS 6402 - 7169 624 ## COG0336 tRNA-(guanine-N1)-methyltransferase 10 4 Op 5 . + CDS 7211 - 7558 573 ## PROTEIN SUPPORTED gi|15803128|ref|NP_289159.1| 50S ribosomal protein L19 + Term 7586 - 7625 7.3 11 5 Op 1 6/0.400 - CDS 7635 - 8117 309 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 12 5 Op 2 . - CDS 8133 - 9356 853 ## COG2199 FOG: GGDEF domain 13 5 Op 3 . - CDS 9349 - 9867 134 ## ECH74115_3842 hypothetical protein - Prom 9919 - 9978 4.1 14 6 Tu 1 . - CDS 10017 - 10379 272 ## B21_02455 hypothetical protein - Prom 10425 - 10484 3.6 + Prom 10422 - 10481 6.6 15 7 Op 1 7/0.400 + CDS 10592 - 11662 1089 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 16 7 Op 2 . + CDS 11673 - 12794 1210 ## COG0287 Prephenate dehydrogenase + Term 12802 - 12841 10.0 17 8 Tu 1 . - CDS 12837 - 13997 955 ## COG0077 Prephenate dehydratase - Prom 14162 - 14221 3.5 - Term 14194 - 14221 1.5 18 9 Tu 1 . - CDS 14247 - 14588 574 ## PROTEIN SUPPORTED gi|15803120|ref|NP_289151.1| translation inhibitor protein RaiA - Prom 14766 - 14825 5.5 - Term 14796 - 14849 3.3 19 10 Tu 1 . - CDS 14859 - 15596 815 ## COG4105 DNA uptake lipoprotein - Prom 15718 - 15777 4.5 + Prom 15617 - 15676 4.8 20 11 Op 1 11/0.200 + CDS 15731 - 16711 1191 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 21 11 Op 2 7/0.400 + CDS 16708 - 17439 532 ## COG1496 Uncharacterized conserved protein + Prom 17459 - 17518 4.7 22 12 Tu 1 . + CDS 17569 - 20142 1845 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 20147 - 20187 6.2 Predicted protein(s) >gi|299856408|gb|ADWV01000043.1| GENE 1 32 - 910 757 292 aa, chain - ## HITS:1 COG:yfjB KEGG:ns NR:ns ## COG: yfjB COG0061 # Protein_GI_number: 16130534 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Escherichia coli K12 # 1 292 1 292 292 611 100.0 1e-175 MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQIAHELQLKNVKTGTLAEI GQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLTDLDPDNAQQQLADVLEGH YISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMIEFEVYIDEIFAFSQRSDGLI ISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRNDL EISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF >gi|299856408|gb|ADWV01000043.1| GENE 2 842 - 1036 154 64 aa, chain + ## HITS:1 COG:no KEGG:EFER_0459 NR:ns ## KEGG: EFER_0459 # Name: grpE # Def: heat shock protein HSP70 cofactor (EC:5.1.3.1) # Organism: E.fergusonii # Pathway: not_defined # 1 59 90 148 350 116 100.0 3e-25 MCCQCSRVPWVSHNANTLEMIIHFSEVLVAKIDDNVSASLETLKLIPIISEVSEMNAKKT RRNS >gi|299856408|gb|ADWV01000043.1| GENE 3 1033 - 1626 948 197 aa, chain + ## HITS:1 COG:ECs3476 KEGG:ns NR:ns ## COG: ECs3476 COG0576 # Protein_GI_number: 15832730 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Escherichia coli O157:H7 # 1 197 1 197 197 315 100.0 3e-86 MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKIANLEAQLAEAQTRERD GILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKANPDMSAMV EGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTL NGRTIRAAMVTVAKAKA >gi|299856408|gb|ADWV01000043.1| GENE 4 1681 - 2922 1319 413 aa, chain - ## HITS:1 COG:yfjDm KEGG:ns NR:ns ## COG: yfjDm COG4536 # Protein_GI_number: 16132248 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorB # Organism: Escherichia coli K12 # 5 413 12 420 420 770 99.0 0 MVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNI LASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPL QILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLS VLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVR EAWRLMSEKKEFTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGL VTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDART VNGVILEALEEIPVAGTRVHIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE >gi|299856408|gb|ADWV01000043.1| GENE 5 2988 - 3779 672 263 aa, chain - ## HITS:1 COG:ECs3474 KEGG:ns NR:ns ## COG: ECs3474 COG4137 # Protein_GI_number: 15832728 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Escherichia coli O157:H7 # 1 263 26 288 288 446 100.0 1e-125 MPVFALLALVAYSVSLALIVPGLLQKNGGWRRMAIISAVIALVCHAIALEARILPDGDSG QNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLALATFMPNEYITHLEA TPGMLVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFNQEMPPLMSIERKMFHIT QIGVVLLTLTLCTGLFYMHNLFSMENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWF NVAGAVILTLAYFGSRIVQQLIS >gi|299856408|gb|ADWV01000043.1| GENE 6 3946 - 5307 1666 453 aa, chain + ## HITS:1 COG:ECs3473 KEGG:ns NR:ns ## COG: ECs3473 COG0541 # Protein_GI_number: 15832727 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Escherichia coli O157:H7 # 1 453 1 453 453 801 99.0 0 MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAV GHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKL GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK LKFYDVLLADTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV LSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQI PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLKQF DDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR >gi|299856408|gb|ADWV01000043.1| GENE 7 5496 - 5804 524 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|110806723|ref|YP_690243.1| 30S ribosomal protein S16 [Shigella flexneri 5 str. 8401] # 1 102 1 102 102 206 100 1e-52 MTPDSVPRWGPVVLFTQEDVMVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFN PIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA >gi|299856408|gb|ADWV01000043.1| GENE 8 5823 - 6371 189 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 11 177 2 160 179 77 29 7e-14 MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQL ESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTE GYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDP GF >gi|299856408|gb|ADWV01000043.1| GENE 9 6402 - 7169 624 255 aa, chain + ## HITS:1 COG:ECs3470 KEGG:ns NR:ns ## COG: ECs3470 COG0336 # Protein_GI_number: 15832724 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Escherichia coli O157:H7 # 1 255 1 255 255 488 100.0 1e-138 MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGM LMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDE RVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHEASATEDSFAEGLLDCPH YTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEF KTEHAQQQHKHDGMA >gi|299856408|gb|ADWV01000043.1| GENE 10 7211 - 7558 573 115 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803128|ref|NP_289159.1| 50S ribosomal protein L19 [Escherichia coli O157:H7 EDL933] # 1 115 1 115 115 225 100 2e-58 MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFT VRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN >gi|299856408|gb|ADWV01000043.1| GENE 11 7635 - 8117 309 160 aa, chain - ## HITS:1 COG:yfiB KEGG:ns NR:ns ## COG: yfiB COG2885 # Protein_GI_number: 16130526 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Escherichia coli K12 # 1 160 1 160 160 309 99.0 1e-84 MIKHLVAPLIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKND YKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGG QIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP >gi|299856408|gb|ADWV01000043.1| GENE 12 8133 - 9356 853 407 aa, chain - ## HITS:1 COG:yfiN_2 KEGG:ns NR:ns ## COG: yfiN_2 COG2199 # Protein_GI_number: 16130525 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Escherichia coli K12 # 240 407 1 168 168 333 99.0 5e-91 MDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLTLKQYAQKNLALTAATMT YSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNILASWHYTRKDPGDTFSNFIS HWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSLAVLTGCILLASGIAITLTRHL HNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFHRFALDFNSLLDEMEEWQLRLQAK NAQLLRTALHDPLTGLANRAAFRSGINTLMNNSDARKTSALLFLDGDNFKYINDTWGHAT GDRVLIEIAKRLAEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDL HNGHQTTMTLSIGYAMTIEHASAEKLQEIADHNMYQAKHQRAEKLVR >gi|299856408|gb|ADWV01000043.1| GENE 13 9349 - 9867 134 172 aa, chain - ## HITS:1 COG:no KEGG:ECH74115_3842 NR:ns ## KEGG: ECH74115_3842 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_EC4115 # Pathway: not_defined # 1 172 1 172 172 329 100.0 2e-89 MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPALSGPPKLCIFSSS RFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESPTFQMELTEQYPSKALLLI AEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNPDVLMLARKKNDG >gi|299856408|gb|ADWV01000043.1| GENE 14 10017 - 10379 272 120 aa, chain - ## HITS:1 COG:no KEGG:B21_02455 NR:ns ## KEGG: B21_02455 # Name: yfiL # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 120 2 121 121 238 100.0 5e-62 MKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADRG LYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQLHEVWQKGADENASTIRLN >gi|299856408|gb|ADWV01000043.1| GENE 15 10592 - 11662 1089 356 aa, chain + ## HITS:1 COG:aroF KEGG:ns NR:ns ## COG: aroF COG0722 # Protein_GI_number: 16130522 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Escherichia coli K12 # 1 356 1 356 356 706 99.0 0 MQKDALNNVHITDEQVLMTPEQLKAAFPLSLQQEAQIADSRKTISDIIAGRDPRLLVVCG PCSIHDPETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTTVGWKGLINDPHMDGSFDV EAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSWSAIGARTTESQTHREMASGL SMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQVALLQTQGNPDGHVILRGGKAP NYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDYRRQPAVAESVVAQIKDGNRSIIGL MIESNIHEGNQSSEQPRSEMKYGVSVTDACISWEMTDALLREIHQDLNGLLTARVA >gi|299856408|gb|ADWV01000043.1| GENE 16 11673 - 12794 1210 373 aa, chain + ## HITS:1 COG:ECs3463_2 KEGG:ns NR:ns ## COG: ECs3463_2 COG0287 # Protein_GI_number: 15832717 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Escherichia coli O157:H7 # 100 373 1 274 274 557 100.0 1e-158 MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAE AEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVVIVGGGGQMGRLFEKMLTL SGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIGKLPPLPKDCILVDLASVKNG PLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGRKPEAYQWFLEQIQVWGARLHRI SAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDP QLYADIIMSSERNLALIKRYYKRFGEAIELLEQGDKQAFIDSFRKVEHWFGDYAQRFQSE SRVLLRQANDNRQ >gi|299856408|gb|ADWV01000043.1| GENE 17 12837 - 13997 955 386 aa, chain - ## HITS:1 COG:ECs3462_2 KEGG:ns NR:ns ## COG: ECs3462_2 COG0077 # Protein_GI_number: 15832716 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Escherichia coli O157:H7 # 105 386 1 282 282 565 99.0 1e-161 MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHRPVRDIDRERDLLERLI TLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPHSARIAFLGPKGSYSHLAA RQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIENTSSGAINDVYDLLQHTSLSI VGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSKFLNRYPHWKIEYTESTSAAMEK VAQAKSPHVAALGSEAGGTLYGLQVLERIEANQQQNFTRFVVLARKAINVSDQVPAKTTL LMATGQQAGALVEALLVLRNHNLIMTRLESRPIHGNPWEEMFYLDIQANLESAEMQKALK ELGEITRSMKVLGCYPSENVVPVDPT >gi|299856408|gb|ADWV01000043.1| GENE 18 14247 - 14588 574 113 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15803120|ref|NP_289151.1| translation inhibitor protein RaiA [Escherichia coli O157:H7 EDL933] # 1 113 1 113 113 225 100 2e-58 MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKEPQGFVADATINTPNGV LVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVKDANFVEEVEEE >gi|299856408|gb|ADWV01000043.1| GENE 19 14859 - 15596 815 245 aa, chain - ## HITS:1 COG:ECs3458 KEGG:ns NR:ns ## COG: ECs3458 COG4105 # Protein_GI_number: 15832712 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Escherichia coli O157:H7 # 1 245 1 245 245 466 100.0 1e-131 MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQDGNWRQAITQLEALDN RYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALD DSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYS VAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAA NSSNT >gi|299856408|gb|ADWV01000043.1| GENE 20 15731 - 16711 1191 326 aa, chain + ## HITS:1 COG:sfhB KEGG:ns NR:ns ## COG: sfhB COG0564 # Protein_GI_number: 16130515 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Escherichia coli K12 # 1 326 1 326 326 623 99.0 1e-178 MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVL GGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDLVVHPGAGNPDGTVLNALL HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMT AGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM AHITHPLVGDPVYGGRPRPPKGASEAFISMLRKFDRQALHATMLRLYHPISGIEMEWHAP IPQDMVELIEVMRADFEEHKDEVDWL >gi|299856408|gb|ADWV01000043.1| GENE 21 16708 - 17439 532 243 aa, chain + ## HITS:1 COG:yfiH KEGG:ns NR:ns ## COG: yfiH COG1496 # Protein_GI_number: 16130514 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 243 1 243 243 501 98.0 1e-142 MSKLIVPQWPLPKGVAACSSSRIGGVSLPPYDSLNLGAHCGDNPDHVEENRKRLFAAGNL PSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNRAGTEV AAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPRAFEVGVEVREAFMAVDAKAS AAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKTTGRMASFI WLI >gi|299856408|gb|ADWV01000043.1| GENE 22 17569 - 20142 1845 857 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 857 1 811 815 715 46 0.0 MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQL RTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRG TLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPV IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL DMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLK PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELH HHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRII QLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELE QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVL ARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGS FLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLK RLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVP GKVIRLEVNEDRIVAVQ Prediction of potential genes in microbial genomes Time: Sun May 15 15:58:41 2011 Seq name: gi|299856407|gb|ADWV01000044.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont43.1, whole genome shotgun sequence Length of sequence - 20457 bp Number of predicted genes - 19, with homology - 19 Number of transcription units - 15, operones - 4 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 5/0.667 + CDS 50 - 1711 1510 ## COG0497 ATPase involved in DNA repair + Prom 1748 - 1807 3.2 2 2 Tu 1 . + CDS 1860 - 2201 345 ## COG2913 Small protein A (tmRNA-binding) + Term 2224 - 2270 8.2 - Term 2212 - 2256 7.8 3 3 Op 1 9/0.333 - CDS 2263 - 2553 295 ## COG2914 Uncharacterized protein conserved in bacteria 4 3 Op 2 . - CDS 2543 - 2992 347 ## COG2867 Oligoketide cyclase/lipid transport protein - Prom 3119 - 3178 2.3 + Prom 2967 - 3026 5.3 5 4 Tu 1 . + CDS 3151 - 3633 474 ## COG0691 tmRNA-binding protein - Term 4328 - 4356 1.0 6 5 Op 1 . - CDS 4371 - 4697 240 ## COG3468 Type V secretory pathway, adhesin AidA 7 5 Op 2 . - CDS 4726 - 6606 1112 ## COG3468 Type V secretory pathway, adhesin AidA 8 6 Tu 1 . - CDS 6768 - 7631 66 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 7876 - 7935 3.0 + Prom 7865 - 7924 4.1 9 7 Tu 1 . + CDS 7944 - 8417 -136 ## ECIAI1_2749 hypothetical protein + Term 8652 - 8704 2.1 10 8 Op 1 . - CDS 8544 - 9287 272 ## ECSP_3600 hypothetical protein 11 8 Op 2 . - CDS 9302 - 9916 240 ## ECSP_3600 hypothetical protein - Prom 10054 - 10113 9.1 + Prom 10724 - 10783 4.1 12 9 Tu 1 . + CDS 10909 - 12225 726 ## COG0582 Integrase + Prom 12255 - 12314 3.7 13 10 Tu 1 . + CDS 12355 - 12951 481 ## ECO103_3813 hypothetical protein - Term 12994 - 13029 4.3 14 11 Tu 1 . - CDS 13038 - 14357 284 ## ECED1_0279 hypothetical protein - Prom 14409 - 14468 1.9 + Prom 15098 - 15157 8.5 15 12 Op 1 . + CDS 15361 - 15588 134 ## ECED1_0280 putative AlpA-family regulatory protein from prophage + Prom 15611 - 15670 2.6 16 12 Op 2 . + CDS 15694 - 15921 153 ## ECO103_3811 hypothetical protein + Term 16098 - 16146 5.9 + Prom 16019 - 16078 3.5 17 13 Tu 1 . + CDS 16170 - 17603 384 ## ECO26_1263 hypothetical protein + Term 17624 - 17674 12.2 + Prom 18428 - 18487 2.6 18 14 Tu 1 . + CDS 18573 - 19136 289 ## EcSMS35_2274 hypothetical protein + Term 19139 - 19190 -0.1 19 15 Tu 1 . + CDS 19942 - 20307 138 ## COG2963 Transposase and inactivated derivatives + Term 20408 - 20448 0.8 Predicted protein(s) >gi|299856407|gb|ADWV01000044.1| GENE 1 50 - 1711 1510 553 aa, chain + ## HITS:1 COG:recN KEGG:ns NR:ns ## COG: recN COG0497 # Protein_GI_number: 16130535 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Escherichia coli K12 # 1 553 1 553 553 1000 99.0 0 MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAA RADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLREL GQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMTARYQLWHQSCRDLAHHQQLS QERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDA NLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFE LEQRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALEI ARALHQQRQQYAEELAQLITDSMHALSMPHGQFTIDVKFDEHHLGADGADRIEFRVTTNP GQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL GESTQVMCVTHLPQVAGCGHQHYFVSKETDGAMTETHMQSLNKKARLQELARLLGGSEVT RNTLANAKELLAA >gi|299856407|gb|ADWV01000044.1| GENE 2 1860 - 2201 345 113 aa, chain + ## HITS:1 COG:STM2685 KEGG:ns NR:ns ## COG: STM2685 COG2913 # Protein_GI_number: 16766000 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Salmonella typhimurium LT2 # 1 111 1 111 112 198 92.0 2e-51 MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVSKIRVGMTQQQVAYALG TPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN >gi|299856407|gb|ADWV01000044.1| GENE 3 2263 - 2553 295 96 aa, chain - ## HITS:1 COG:yfjF KEGG:ns NR:ns ## COG: yfjF COG2914 # Protein_GI_number: 16130537 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 96 7 102 102 163 98.0 7e-41 MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPA KLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK >gi|299856407|gb|ADWV01000044.1| GENE 4 2543 - 2992 347 149 aa, chain - ## HITS:1 COG:ECs3481 KEGG:ns NR:ns ## COG: ECs3481 COG2867 # Protein_GI_number: 15832735 # Func_class: I Lipid transport and metabolism # Function: Oligoketide cyclase/lipid transport protein # Organism: Escherichia coli O157:H7 # 1 149 10 158 158 294 100.0 3e-80 MEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCTGSRILESTPGQMTAAVDVSKA GISKTFTTRNQLTSNQSILMNLVDGPFKKLIGGWKFTPLSQEACRIEFHLDFEFTNKLIE LAFGRVFKELASNMVQAFTVRAKEVYSAR >gi|299856407|gb|ADWV01000044.1| GENE 5 3151 - 3633 474 160 aa, chain + ## HITS:1 COG:ECs3482 KEGG:ns NR:ns ## COG: ECs3482 COG0691 # Protein_GI_number: 15832736 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Escherichia coli O157:H7 # 1 160 1 160 160 308 100.0 3e-84 MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKN AWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR >gi|299856407|gb|ADWV01000044.1| GENE 6 4371 - 4697 240 108 aa, chain - ## HITS:1 COG:ECs3515 KEGG:ns NR:ns ## COG: ECs3515 COG3468 # Protein_GI_number: 15832769 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 1 108 1464 1571 1571 200 96.0 7e-52 MESKSVDTRSLYRELGATLSYNMRLGNGMEVEPWLKAAVRKEFVDDNRVKVNSDGNFVND LSGRRGIYQAGIKASFSSTLSGHLGVGYSHGAGVESPWNGVAGVNWSF >gi|299856407|gb|ADWV01000044.1| GENE 7 4726 - 6606 1112 626 aa, chain - ## HITS:1 COG:ECs3515 KEGG:ns NR:ns ## COG: ECs3515 COG3468 # Protein_GI_number: 15832769 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 1 588 386 973 1571 813 97.0 0 MSVLTNAKADATRIDNGGVMDVTGNATNTIINGGTQNINNHGIATGTNINGGTQNIKSGG KADTTIISSGSRQVVEKDGTATGSNISAGGSLIVYTGGIAHGVNQETGSALVANTGAGTD IEGYNKLSHFTITGGEANYVVLENTGELTVVAKTSAKNTTVDAGGKLIVQKEAKTDTTRL NNGGVLEVQDGGEAKHVEQQSGGALIASTTSGTLIEGTNSYGDAFYIRNSEAKNVVLENA GSLTVVTGSRAVDTIINANGKMDVYGKDVGTVLNSAGTQTIYASATSDKANIKGGKQTVY GLATEANIESGEQIVDGGSTEKTHINGGTQTVQNYGKAINTDIVSGLQQIMANGTAEGSI INGCSQVVNEGGLAENSVLNDGGTLDVREKGSATGIQQSSQDALVATTRATRVTGTRADG VAFSIEQGAANNILLANGGVLTMESDTSSDKTQVNTGGREIVKTKATATGTTLTGGEQIV EGVANETTINDGGIQTVSANGEAIKTKINEGGTLTVNDNGKATDIVQNSGAALQTSTANG IEISGTHQYGTFSISGNLATNMLLENGGNLLVLAGTEARDSTVGSGGAANGSYRSNGLGG HIETGMRFTDGNWNLTPYASLTGVHR >gi|299856407|gb|ADWV01000044.1| GENE 8 6768 - 7631 66 287 aa, chain - ## HITS:1 COG:ECs3515 KEGG:ns NR:ns ## COG: ECs3515 COG3468 # Protein_GI_number: 15832769 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli O157:H7 # 1 241 44 284 1571 367 88.0 1e-101 MNRTSPHYCRRSVLSLLISALIYAPPGMTAFTPDVIGVVNDETVDGSQRVDERGTTNNTH IINHGQQNVHGGVSNGSLIESGGYQDVGSHNNFVGQANNTTINGGRQTIHDGGISTGTII DSGNQDVYTGGISNGTTIKGGNSHISGGTANGTIIDGGGQKVTTQGHVDGTTINKSGYQD ITQGSIATNTIINGGRQYVEQSTVGTTTIKNGGEQRVYESHALDTTIEGGTQSLNNKSTA KILRSILVVRKLLITPAPRMLLKFIPVACLMLVVVRQQMLPSTMVQF >gi|299856407|gb|ADWV01000044.1| GENE 9 7944 - 8417 -136 157 aa, chain + ## HITS:1 COG:no KEGG:ECIAI1_2749 NR:ns ## KEGG: ECIAI1_2749 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 157 1 157 157 284 100.0 6e-76 MNIFCSHKNNTITLRSQILLLLQHSSPHCWANIDWARARKLIPRLHSSSNSTTRCHILRP SRFGLQTTRASTADNVLSSFFSPDLLPRFYVEEVTLSTQFISQAWCTVTLLLMGKIKKTF RQLRKVEPDIRINISTNYSTNSDTASSTNKSRGYVKA >gi|299856407|gb|ADWV01000044.1| GENE 10 8544 - 9287 272 247 aa, chain - ## HITS:1 COG:no KEGG:ECSP_3600 NR:ns ## KEGG: ECSP_3600 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 7 239 217 449 449 405 86.0 1e-112 MSESKEHPIDIQEKKDAFVNEFKGILFDKNGRSSEFLLNFYECCYEFLPRAQPQDKIESY NSALQAFSIFCSSTLIHNNIGFDFKLFPEVKLCGENLETVFKYKNGDDVREIAKINIALQ KEEDGLYNLGGLDFKGCFFSGQNFSNYDIQYVNWGTSLFDLDTPCIFNAPAYNKSNEKSL KPVSENGLSGVLTDRNNKIKLITGVAPFDDILFMDDDFDDSSSEDDPVENSPVVTSPVVS SSKSSFQ >gi|299856407|gb|ADWV01000044.1| GENE 11 9302 - 9916 240 204 aa, chain - ## HITS:1 COG:no KEGG:ECSP_3600 NR:ns ## KEGG: ECSP_3600 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O157_TW14359 # Pathway: not_defined # 1 204 1 204 449 309 79.0 5e-83 MLVSKSNGFNASAVLGSGSYNENKSSKHMELLAHSILKLICKEAASETYRGALETLQKMM SECIYHEGNAFVIMGVGEQLKRIKYEVGENNLKVFNVHFNNNHELVSSGEPDVICLSKQV WENLLIKLKLENNENVFSETKKLSNKNNDDQFFECAKRNEQNLFDNIRKSDFHVGLLKPS STRSVILETPPNVCMESRNSYEKK >gi|299856407|gb|ADWV01000044.1| GENE 12 10909 - 12225 726 438 aa, chain + ## HITS:1 COG:mlr0958 KEGG:ns NR:ns ## COG: mlr0958 COG0582 # Protein_GI_number: 13471077 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mesorhizobium loti # 30 420 32 400 417 159 31.0 1e-38 MAVNLTETAIRALKAKKTSFYVWSNSSQRGTGRLGVKVQPSGSKIFYFRYYVEKGKKERF IQLGIWPEMKLATANELAKKYGAWLIEGKDPQAELERQQFAEQQRIQLHQSQGSFEALIH GYVNKMKIDNKRTWQDVLKRLENECYTVIPRETKAKDVTSGQIKHILAGIIQRGAVVHSN RIRSYLMAAFNYGLKADNDPMNTSVGITFGLEANPVSVIPKQSSAEKVGDTWLTLEELRF LMEHFAEATNVGLLMQHLIRFCIYTGGQRPFEMIASQWCDVDFQQKTLLVTADVSKNKRE HLIPLTESALQELSCVQELTKEKSSPYIFPLSTNGKRPVRTDSLARAIMYFRAFNPDFKI FTARDLRRTCKTLMGEAGISKEIRDRIQNHALNDVSSKHYDRYDYLPEKRRALEIWEDRV NNYQQQTGNNVVNLFGRR >gi|299856407|gb|ADWV01000044.1| GENE 13 12355 - 12951 481 198 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3813 NR:ns ## KEGG: ECO103_3813 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 198 1 198 198 384 96.0 1e-106 MAVIPMSYSPATVARRFSILDGVTIQGVLYQIIWDPKTPFAAVIEAAPSVIDGDVRHKVV ATLELQRRPRLEGVFVQKFWEEQDVAQIEGIVVDGAVRDVGLATFVYETIVTKAGVVLLS DNEQYEGGKALWQHIARRSTNLKVFILDTDSARYYPFDGDRICYDGESIPESEIWSEHPD RNKHGVVLVAESVNGKAA >gi|299856407|gb|ADWV01000044.1| GENE 14 13038 - 14357 284 439 aa, chain - ## HITS:1 COG:no KEGG:ECED1_0279 NR:ns ## KEGG: ECED1_0279 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_ED1a # Pathway: not_defined # 1 439 107 545 545 838 94.0 0 MCHLYNGFDEGNISLKTWGAMQEVQTTSTFISPGPRTWKTPELAKFVGDDLFNILTECKA WSSPIPAETRQGYCHQDLSVAHSCTSELLAHLNQYHEIDESAILARVIGMTVNGFYKKNN TDLPEWLSPFKEEHKIFRDCLEQKTEDVIRLKEQLLKTGRSEFVNNLCRVANWYEIKSIY DEYVRLYANEIIGWFNKTMEYFKPTDFIRYTWKFATVTPDKETETKHTTAWEKDYCQITI QRDELLRLIHTNTLQDAVIYLCHCLQKKYKKSSQNEIEFPGIKPPASESEINITDNFEFY SLLELSKDNERRLETFQKWYEKNKVLLESHKQKRTEKIDVAVRLVGLKAYDLHEGIPDSP KRKVKDGINEDIKADTSLRLPKTNISDTSLNRYRRTVKEIINNEIDAFLLEQKKKNKRFP YSEDRDVIRPLWGKCLTGQ >gi|299856407|gb|ADWV01000044.1| GENE 15 15361 - 15588 134 75 aa, chain + ## HITS:1 COG:no KEGG:ECED1_0280 NR:ns ## KEGG: ECED1_0280 # Name: not_defined # Def: putative AlpA-family regulatory protein from prophage # Organism: E.coli_ED1a # Pathway: not_defined # 1 75 8 82 82 138 100.0 7e-32 MWLPLTDEQRLVILKAYGIECDRLVREKERYEITSISRTQAWKLEREGTFPPRKSIGKKS CGWLLSDLLCWIQTR >gi|299856407|gb|ADWV01000044.1| GENE 16 15694 - 15921 153 75 aa, chain + ## HITS:1 COG:no KEGG:ECO103_3811 NR:ns ## KEGG: ECO103_3811 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 75 1 75 477 115 69.0 5e-25 MSYIKPDTPYPVYAQPSMTGNAIIETQHNEKASLAMTTTSLLTAMSIACQNQIDVCNPGN LRGPVNIYTMVLADS >gi|299856407|gb|ADWV01000044.1| GENE 17 16170 - 17603 384 477 aa, chain + ## HITS:1 COG:no KEGG:ECO26_1263 NR:ns ## KEGG: ECO26_1263 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 477 1 477 477 971 97.0 0 MCLLAPENPYPIYALPPLVRNAIIETQKNTQAPLAMVATSALTAISIACQNQIDVCRPGN LRGPVNLYSLILADSGERKTTVDKVFMKAFYLRDEALAEEYAKLVENYSTEKEIWEQKQK ALESKFHKEIRAGKDYKATESELETHLNKSPVPPQIRRTIFNETTIEGMLKYYSDSNRSF ALVSSEGGVIFDSRAMSKLGIINTLWDGGSLFIDRKSSPGINLKEPRLTMSAMIQPDVYH KGFCTRKKELVKTSGHHARFLMCQPTSTQGTRIITGDNYSSQYQDLFEQRINELIDESLA MSGERRCLHFSPQAARIWTDYYNDVESKLGGLGPLRHCREYAAKNAEYMARLAGLIHHSS GEEGDISPYTAEMARELAIWYGNEYVRLSNPLTFDNPALTVPVRLIPEELELFNWIKSYC IEKGIPCMKKNDILQRGPNRFRKKDKINWLLDLLYEQNRVVPVIEGKTLCVAPNFDL >gi|299856407|gb|ADWV01000044.1| GENE 18 18573 - 19136 289 187 aa, chain + ## HITS:1 COG:no KEGG:EcSMS35_2274 NR:ns ## KEGG: EcSMS35_2274 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 187 1 187 187 372 98.0 1e-102 MYNANPNYEMNFAILKDVNEHMEGLFQRFSKLLPFRIDFAYRKDTPSFGHSCKHSMCMEI YRLLSENQTMLAGYYWVMEYTPDKGLHIHFIGYLDGQRHKNSYQISRQLGDIWRRITEGD GYFHLCRAKDKYPVRIDHVIHYSDKSAVDDLRYALSYLAKQDQKEHGIILGRSRLPEKSN RGRPRHN >gi|299856407|gb|ADWV01000044.1| GENE 19 19942 - 20307 138 121 aa, chain + ## HITS:1 COG:yi21_g3 KEGG:ns NR:ns ## COG: yi21_g3 COG2963 # Protein_GI_number: 16129938 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 121 16 136 136 208 99.0 2e-54 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG E Prediction of potential genes in microbial genomes Time: Sun May 15 15:59:16 2011 Seq name: gi|299856406|gb|ADWV01000045.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont44.1, whole genome shotgun sequence Length of sequence - 15893 bp Number of predicted genes - 16, with homology - 16 Number of transcription units - 12, operones - 4 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 6/0.000 + CDS 19 - 651 298 ## COG2801 Transposase and inactivated derivatives 2 1 Op 2 . + CDS 654 - 1514 638 ## COG2842 Uncharacterized ATPase, putative transposase 3 2 Op 1 9/0.000 + CDS 1868 - 3139 171 ## COG4584 Transposase and inactivated derivatives 4 2 Op 2 . + CDS 3129 - 3911 498 ## COG1484 DNA replication protein 5 3 Tu 1 . - CDS 4087 - 4587 139 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 6 4 Op 1 . - CDS 4715 - 5554 98 ## COG0294 Dihydropteroate synthase and related enzymes 7 4 Op 2 . - CDS 5548 - 5895 143 ## COG2076 Membrane transporters of cations and cationic drugs - Prom 5934 - 5993 3.3 8 5 Tu 1 . - CDS 6113 - 7348 1112 ## COG3328 Transposase and inactivated derivatives - Term 7514 - 7557 6.0 9 6 Tu 1 . - CDS 7616 - 9145 505 ## APECO1_O1R92 transposase - Term 9265 - 9309 12.9 10 7 Op 1 41/0.000 - CDS 9334 - 10971 2113 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 11 7 Op 2 . - CDS 11027 - 11347 182 ## COG0234 Co-chaperonin GroES (HSP10) 12 8 Tu 1 . - CDS 11554 - 12456 684 ## COG2746 Aminoglycoside N3'-acetyltransferase - Prom 12495 - 12554 3.3 13 9 Tu 1 . - CDS 12620 - 13411 428 ## COG1708 Predicted nucleotidyltransferases - Prom 13640 - 13699 3.0 + Prom 13478 - 13537 3.3 14 10 Tu 1 . + CDS 13560 - 14573 353 ## COG0582 Integrase + Term 14735 - 14771 0.4 + Prom 14676 - 14735 2.8 15 11 Tu 1 . + CDS 14926 - 15126 143 ## ASA_P4G104 transposition modulator TnpM + Prom 15128 - 15187 2.4 16 12 Tu 1 . + CDS 15252 - 15845 286 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs Predicted protein(s) >gi|299856406|gb|ADWV01000045.1| GENE 1 19 - 651 298 210 aa, chain + ## HITS:1 COG:mlr6273 KEGG:ns NR:ns ## COG: mlr6273 COG2801 # Protein_GI_number: 13475245 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 3 190 346 534 535 80 30.0 2e-15 MAVGTYHGSVHNGLLQPPAARWAEAVARVGVPAVVTRATSFLVDFLPILRRTLTRTGFVI DHIHYYADALKPWIARRERWPSFLIRRDPRDISRIWVLEPEGQHYLEIPYRTLSHPAVTL WEQRQALAKLRQQGREQVDESALFRMIGQMREIVTSAQKATRKARRDADRRQHLKTSARP DKPVPPDTDIADPQADNLPPAKPFDQIEEW >gi|299856406|gb|ADWV01000045.1| GENE 2 654 - 1514 638 286 aa, chain + ## HITS:1 COG:all3629 KEGG:ns NR:ns ## COG: all3629 COG2842 # Protein_GI_number: 17231121 # Func_class: R General function prediction only # Function: Uncharacterized ATPase, putative transposase # Organism: Nostoc sp. PCC 7120 # 16 282 8 268 276 59 24.0 6e-09 MDEYPIIDLSHLLPAAQGLARLPADERIQRLRADRWIGYPRAVEALNRLEALYAWPNKQR MPNLLLVGPTNNGKSMIVEKFRRTHPASSDADQEHIPVLVVQMPSEPSVIRFYVALLAAM GAPLRPRPRLPEMEQLALALLRKVGVRMLVIDELHNVLAGNSVNRREFLNLLRFLGNELR IPLVGVGTRDAYLAIRSDDQLENRFEPMMLPVWEANDDCCSLLASFAASLPLRRPSPIAT LDMARYLLTRSEGTIGELAHLLMAAAIVAVESGEEAINHRTLSMAC >gi|299856406|gb|ADWV01000045.1| GENE 3 1868 - 3139 171 423 aa, chain + ## HITS:1 COG:AGl49 KEGG:ns NR:ns ## COG: AGl49 COG4584 # Protein_GI_number: 15890128 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 9 392 91 464 498 147 28.0 3e-35 MYRDLVALGFTGSYDRVCAFARQWKDSEQFKAQTSGKGCFIPLRFACGEAFQFDWSEDFA RIAGKQVKLQIAQFKLAHSRAFVLRAYYQQKHEMLFDAHWHAFQIFGGIPKRGIYDNMKT AVDSVGRGKERRVNQRFTAMVSHYLFDAQFCNPASGWEKGQIEKNVQDSRQRLWQGAPDF QSLADLNVWLEHRCKALWSELRHPELDQTVQEAFADEQGELMALPNAFDAFVEQTKRVTS TCLVHHEGNRYSVPASYANRAISLRIYADKLVMAAEGQHIAEHPRLFGSGHARRGHTQYD WHHYLSVLQKKPGALRNGAPFAELPPAFKKLQSILLQRPGGDRDMVEILALVLHHDEGAV LSAVELALECGKPSKEHVLNLLGRLTEEPPPKPIPIPKGLRLTLEPQANVNRYDSLRRAH DAA >gi|299856406|gb|ADWV01000045.1| GENE 4 3129 - 3911 498 260 aa, chain + ## HITS:1 COG:mll6090 KEGG:ns NR:ns ## COG: mll6090 COG1484 # Protein_GI_number: 13475085 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Mesorhizobium loti # 48 190 1 141 162 209 70.0 6e-54 MQHEGHVRILKSLKLFGMAHAIEELGNQNSPAFNQALPMLDSLIKAEVAEREVRSVNYQL RVAKFPVYRDLVGFDFSQSLVNEATVKQLHRCDFMEQAQNVVLIGGPGTGKTHLATAIGT QAVMHLNRRVRFFSTVDLVNALEQEKSSGRQGQIANRLLYADLVILDELGYLPFSQTGGA LLFHLLSKLYEKTSVILTTNLSFSEWSRVFGDEKMTTALLDRLTHHCHILETGNESYRFK HSSTQNKQEEKQTRKLKIET >gi|299856406|gb|ADWV01000045.1| GENE 5 4087 - 4587 139 166 aa, chain - ## HITS:1 COG:DR0188 KEGG:ns NR:ns ## COG: DR0188 COG0454 # Protein_GI_number: 15805224 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Deinococcus radiodurans # 15 152 10 150 175 67 36.0 8e-12 MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARIDRTFAETFVLRSELLV ASCSDGIVGCCTLSAEDPEFWPDALKGEAAYLHKLAVRRTHAGRGVSSALIEACRHAART QGCAKLRLDCHPNLRGLYERLGFTHVDTFNPGWDPTFIAERLELEI >gi|299856406|gb|ADWV01000045.1| GENE 6 4715 - 5554 98 279 aa, chain - ## HITS:1 COG:RSc1527 KEGG:ns NR:ns ## COG: RSc1527 COG0294 # Protein_GI_number: 17546246 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Ralstonia solanacearum # 4 248 26 266 291 129 37.0 9e-30 MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPAD EIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADC RLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFL SPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGN GADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA >gi|299856406|gb|ADWV01000045.1| GENE 7 5548 - 5895 143 115 aa, chain - ## HITS:1 COG:BMEI1045 KEGG:ns NR:ns ## COG: BMEI1045 COG2076 # Protein_GI_number: 17987328 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Brucella melitensis # 1 100 1 100 110 101 61.0 4e-22 MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAY AVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW >gi|299856406|gb|ADWV01000045.1| GENE 8 6113 - 7348 1112 411 aa, chain - ## HITS:1 COG:RSc0252 KEGG:ns NR:ns ## COG: RSc0252 COG3328 # Protein_GI_number: 17544971 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 407 1 411 416 600 75.0 1e-171 MPRKKKTPVVTPAIDLPKEFLEKLIPGPMDAAGVEAVFQQLKKAVIERALGAELGLHLAD AEGGSGNHRNGRSGKTVLTDEGPLRIDVPRDRTGTFEPQLIPKHERRFAGFDDRIVSMYA RGMTVREIQGHLAEMYSVEVSPEFISKVTDEVMAEVTAWQARPLEAMYPVVFFDALRVKI REDGVVRNKAVYLALGVLADGTRDILGLWIENTEGAKFWMKVFNDLKTRGVNDILIGVAD GLKGFPEALEAVFPATTLQTCIVHLIRNSLDYAGWKDRKALAAAIKPIYTAPTAEAAEAE LDAFEAGDWGERFPTVVAAWRRAWTRVVPFFAFPPDVRRVIYTTNAIESVHARLRKIIKT RGHFPSDEAATKLIWLALRNITAEWSRASQHWKAAMNQFAIIYEDRFTLAR >gi|299856406|gb|ADWV01000045.1| GENE 9 7616 - 9145 505 509 aa, chain - ## HITS:1 COG:no KEGG:APECO1_O1R92 NR:ns ## KEGG: APECO1_O1R92 # Name: tnpA # Def: transposase # Organism: E.coli_APEC # Pathway: not_defined # 1 498 1 498 509 939 100.0 0 MPRLTAPRRQAEVCAPLPAAHAAARYARHLPERTLLYALVQAHYPDFIARLEAEDRPLPE YVREEFETYLRCGVLEHGFLRVVCEQCRAERLVAFSCKKRGFCPSCGARRMAESARHLVE EVFGPRPVRQWVLSFPYPLRFLFASKPEAIGPVLGIVHRVIAGWLADQAGVDHASAQCGA VTLIQRFGSALNLNVHFHMLWLDGVYEDTTERPQRKPRLHRTRAPTSAQLTELAGTIAHR VCRHLSRRGWLEGEDESVFLSDSAGSDDGMDGLRMSSMTYRIATGRDAGRKVVTLQTLPG DAGSLEGDAGKVGGFSLHAGVAAEAHESHKLEKLCRYITRPAISEQRLSISPQGRVRYQL KTPWRNGTTHVEWDAVDFIAKLAALVPPPRAHLTRFHGVFAPNANLRAQLTPSGRGRRPA GDAVPVDASAHDEPRSPEQKRRAMSWAQRLKRVFSIDVTTCAHCGGAVRIVASIEDPKAI RAILAHFEKHGALEQAHYRPAARAPPPAA >gi|299856406|gb|ADWV01000045.1| GENE 10 9334 - 10971 2113 545 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 543 1 543 547 818 76 0.0 MAAKDIRFGEDARARMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI ELADKFENMGAQMVKEVASKTSDNAGDGTTTATVLAQALIREGMKAVAAGMNPMDLKRGI DKAVTSAVEELKKISKPCSTSKEIAQVGSISANSDTDIGELIAKAMDKVGKEGVITVEEG SGLENELDVVEGMQFDRGYLSPYFINNPQSMQAELEDPFILLHDKKISNVRDLLPILEGV AKAGKPLLIVAEDVEGEALATLVVNTIRGIVKVCAVKAPGFGDRRKAMLEDMAILTGGTV ISEEVGLSLEKATINDLGRAKKVQVSKENTTIIDGAGDTADIEARIKQIKAQIEETTSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALI RAKAAIAELKGANEDQNHGIAIALRAMEAPLREIVTNAGDEPSVVLNRVAEGTGAFGYNA ANGEFGDMIEFGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPKKEEPAAPGGGMGGM GGMDF >gi|299856406|gb|ADWV01000045.1| GENE 11 11027 - 11347 182 106 aa, chain - ## HITS:1 COG:XF0616 KEGG:ns NR:ns ## COG: XF0616 COG0234 # Protein_GI_number: 15837218 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Xylella fastidiosa 9a5c # 12 106 1 95 95 108 60.0 2e-24 MGSPTRKICAAINIKPLYDRVVIKRTEEEKVSAGGIVIPDSATEKPIKGQVVAVGEGKVF DNGNVRAPKVKVGDQVLFGKYAGTEVKLDGTEYLVVKEDDIFAVLG >gi|299856406|gb|ADWV01000045.1| GENE 12 11554 - 12456 684 300 aa, chain - ## HITS:1 COG:alr1528 KEGG:ns NR:ns ## COG: alr1528 COG2746 # Protein_GI_number: 17229020 # Func_class: V Defense mechanisms # Function: Aminoglycoside N3'-acetyltransferase # Organism: Nostoc sp. PCC 7120 # 19 281 11 263 274 109 29.0 6e-24 MMTDPRKNGDLHEPATAPATPWSKSELVRQLRDLGVRSGDMVMPHVSLRAVGPLADGPQT LVDALIEAVGPTGNILAFVSWRDSPYEQTLGHDAPPAAIAQSWPAFDPDHAPAYPGFGAI NEFIRTYPGCRRSAHPDASMAAIGPDAAWLVAPHEMGAAYGPRSPIARFLAHAGKILSIG AGPDAVTALHYAEAVARIEGKRRVTYSMPLLREGKRVWVTTSDWDSNGILDEYAAPDGPD AVERIARDYLARTRVAQGPVGGAQSRLIDAADIVSFGIEWLEARHAAPAAAALKPKQRRD >gi|299856406|gb|ADWV01000045.1| GENE 13 12620 - 13411 428 263 aa, chain - ## HITS:1 COG:STM1264 KEGG:ns NR:ns ## COG: STM1264 COG1708 # Protein_GI_number: 16764615 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferases # Organism: Salmonella typhimurium LT2 # 1 257 1 257 262 211 44.0 9e-55 MRVAVTIEISNQLSEVLSVIERHLESTLLAVHLYGSAVDGGLKPYSDIDLLVTVTVRLDE TTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRNDILAG IFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWA GDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEEDRLA SRADQLEEFVHYVKGEITKVVGK >gi|299856406|gb|ADWV01000045.1| GENE 14 13560 - 14573 353 337 aa, chain + ## HITS:1 COG:VCA0291 KEGG:ns NR:ns ## COG: VCA0291 COG0582 # Protein_GI_number: 15601056 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Vibrio cholerae # 15 330 4 320 320 275 45.0 1e-73 MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGVRHPATLGSSE VEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPD EVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALML PESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHST DPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDL LGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER >gi|299856406|gb|ADWV01000045.1| GENE 15 14926 - 15126 143 66 aa, chain + ## HITS:1 COG:no KEGG:ASA_P4G104 NR:ns ## KEGG: ASA_P4G104 # Name: tnpM # Def: transposition modulator TnpM # Organism: A.salmonicida # Pathway: not_defined # 1 66 129 194 194 120 100.0 2e-26 MNANEPSTSCCVCCKEIPLDAAFTPEGAEYVEHFCGLECYQRFQARASTATETSVKPDAC DSPPSG >gi|299856406|gb|ADWV01000045.1| GENE 16 15252 - 15845 286 197 aa, chain + ## HITS:1 COG:DRC0005 KEGG:ns NR:ns ## COG: DRC0005 COG1961 # Protein_GI_number: 10957532 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Deinococcus radiodurans # 3 145 4 146 185 176 63.0 2e-44 MTGQRIGYIRVSTFDQNPERQLEGVKVDRAFSDKASGKDVKRPQLEALISFARTGDTVVV HSMDRLARNLDDLRRIVQTLTQRGVHIEFVKEHLSFTGEDSPMANLMLSVMGAFAEFERA LIRERQREGIALAKQRGAYRGRKKGTVAKLAMRQPFVLFKGLTFQKLCLPGAFRPGDHHN KMLRPGLCVVHASPQYL Prediction of potential genes in microbial genomes Time: Sun May 15 15:59:28 2011 Seq name: gi|299856405|gb|ADWV01000046.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont45.1, whole genome shotgun sequence Length of sequence - 15757 bp Number of predicted genes - 26, with homology - 26 Number of transcription units - 15, operones - 8 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 60 - 395 214 ## EcE24377A_D0059 hypothetical protein - Term 430 - 473 9.2 2 2 Tu 1 . - CDS 481 - 1329 602 ## SC102 YdiA + Prom 1821 - 1880 5.8 3 3 Tu 1 . + CDS 1909 - 2160 225 ## SeHA_A0067 hypothetical protein + Term 2373 - 2417 0.7 - Term 1967 - 2007 -0.5 4 4 Tu 1 . - CDS 2191 - 2349 259 ## ECSE_P1-0068 hypothetical protein - Term 2368 - 2398 5.0 5 5 Op 1 . - CDS 2411 - 3349 749 ## COG5464 Uncharacterized conserved protein 6 5 Op 2 . - CDS 3414 - 3680 222 ## SC110 YdfB 7 5 Op 3 . - CDS 3774 - 4208 378 ## SC111 YdfA 8 6 Op 1 . - CDS 4810 - 4998 77 ## SeHA_A0059 hypothetical protein 9 6 Op 2 . - CDS 4937 - 5437 551 ## COG4734 Antirestriction protein - Term 5728 - 5773 2.2 10 7 Op 1 . - CDS 5899 - 6258 330 ## SC115 hypothetical protein 11 7 Op 2 . - CDS 6304 - 6738 363 ## ECSE_P2-0029 hypothetical protein 12 7 Op 3 . - CDS 6752 - 6973 304 ## ECSE_P1-0048 hypothetical protein 13 7 Op 4 . - CDS 6974 - 7657 653 ## COG0863 DNA modification methylase - Term 7995 - 8032 8.5 14 8 Tu 1 . - CDS 8042 - 8968 697 ## ECO26_p1-53 conserved predicted protein + Prom 9268 - 9327 10.6 15 9 Tu 1 . + CDS 9362 - 9541 152 ## SeHA_A0038 protein ImpC - Term 9433 - 9472 -0.7 16 10 Op 1 . - CDS 9625 - 10017 306 ## EcE24377A_D0012 stable plasmid inheritance protein 17 10 Op 2 . - CDS 10021 - 10995 694 ## EcE24377A_D0013 plasmid segregation protein ParM - Prom 11125 - 11184 4.2 - Term 11194 - 11229 5.1 18 11 Op 1 . - CDS 11234 - 11608 124 ## YEP0071 hypothetical protein 19 11 Op 2 . - CDS 11608 - 12240 373 ## YpsIP31758_B0108 hypothetical protein 20 12 Tu 1 . - CDS 12367 - 12570 82 ## gi|300820003|ref|ZP_07100183.1| hypothetical protein HMPREF9345_05102 21 13 Op 1 . - CDS 12824 - 13609 483 ## COG0582 Integrase 22 13 Op 2 . - CDS 13611 - 14024 420 ## SeHA_A0030 hypothetical protein - Prom 14131 - 14190 4.4 + Prom 14492 - 14551 3.3 23 14 Op 1 . + CDS 14586 - 14816 202 ## KPN_pKPN4p07074 virulence-associated protein 24 14 Op 2 . + CDS 14813 - 15229 376 ## COG1487 Predicted nucleic acid-binding protein, contains PIN domain + Term 15251 - 15280 1.6 25 15 Op 1 . + CDS 15303 - 15539 190 ## KPN_pKPN4p07072 hypothetical protein + Term 15542 - 15577 2.0 26 15 Op 2 . + CDS 15586 - 15757 116 ## COG3316 Transposase and inactivated derivatives Predicted protein(s) >gi|299856405|gb|ADWV01000046.1| GENE 1 60 - 395 214 111 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_D0059 NR:ns ## KEGG: EcE24377A_D0059 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 111 1 111 111 157 100.0 1e-37 MASKKFYSDDDIQLAKAALSELPDLTAQRKTLRDFLDAIRDDIIVLVRTKGYTLADVRDT LKNAGYEVGEKALRDIIREAESKKPSRRSSSKTAPKKTDSGRKDGIDMNNN >gi|299856405|gb|ADWV01000046.1| GENE 2 481 - 1329 602 282 aa, chain - ## HITS:1 COG:no KEGG:SC102 NR:ns ## KEGG: SC102 # Name: ydiA # Def: YdiA # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 282 2 283 283 586 99.0 1e-166 MNQTLPTADLNTAGTTDVIPSVAIDRIIAQRNEGIALFMQAMECLATARKILLDASGDIF LYGFEDCVTDSVRRIDKPEEAKRNITRLADRKIWDRLMTDTGMYTFMSSCQRDEWNSQLM SDTCPEITLDNVLATFRHLNACKMQTFEQGLIDVYRKLSWDYRTNNPCRLGKKIIIENLL YRWSNGRVTLDCSGREALDDLVRPFYLLEGRNVPDFRNSIGAQYGEFLGNGDNVGKLLEG EYFTVRGYQKGTVHIVFKRSDLVEKLNDIIARHYPGALPPRV >gi|299856405|gb|ADWV01000046.1| GENE 3 1909 - 2160 225 83 aa, chain + ## HITS:1 COG:no KEGG:SeHA_A0067 NR:ns ## KEGG: SeHA_A0067 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 83 1 83 83 131 100.0 6e-30 MTGWELRIWRKSMLWSREKAAREFGVTQRTWHAWENAEQVDVTVWRTTQALSVRDLLPHM QGMRKADIIRRLENELGETAEDV >gi|299856405|gb|ADWV01000046.1| GENE 4 2191 - 2349 259 52 aa, chain - ## HITS:1 COG:no KEGG:ECSE_P1-0068 NR:ns ## KEGG: ECSE_P1-0068 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 52 1 52 52 86 98.0 3e-16 MTIAERLIQKGALEVAREIACRLRDMGWTPERIQEATGLSGEELKKLFPDEQ >gi|299856405|gb|ADWV01000046.1| GENE 5 2411 - 3349 749 312 aa, chain - ## HITS:1 COG:YPMT1.71 KEGG:ns NR:ns ## COG: YPMT1.71 COG5464 # Protein_GI_number: 16082863 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 4 312 17 328 328 347 58.0 1e-95 MSQKKTTTTPTPHDAAFRSFLANPDVARDFLELHLPAEYRQLCDLSTLKLEPATFVEPDL HQYASDILWSVKTTGGEDGYVYTLIEHQSTENLYMPFRMLRYSVAAMQRHLEQHKTLPLV IPVLFYHGERSPYPYSMNWLDCFENPALAAKIYTKPFPLVDITVVDDNEIMNHRRMAALT LLMKHIRHRDMMELLDKLPQVMVEISDEQVRVLIHYIVNAGDSVSPEFMRALAERLPQHE DKLMTIAERLEQKGRQEGRMEGRMEGRMEGRMEGALEKALAIACQLQKMGMTPEQIKQAT GLSDDELKKITH >gi|299856405|gb|ADWV01000046.1| GENE 6 3414 - 3680 222 88 aa, chain - ## HITS:1 COG:no KEGG:SC110 NR:ns ## KEGG: SC110 # Name: ydfB # Def: YdfB # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 88 1 88 88 148 98.0 6e-35 MRPSIIFATAEYVKRLREECLRENKPLHRHTRFRRQELAQDEINPDVLAMSGHIARRCSE QKRVRIPAMKVSEWGHLLRALEIERVCH >gi|299856405|gb|ADWV01000046.1| GENE 7 3774 - 4208 378 144 aa, chain - ## HITS:1 COG:no KEGG:SC111 NR:ns ## KEGG: SC111 # Name: ydfA # Def: YdfA # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 1 144 1 144 144 299 99.0 2e-80 MTVSSTISVFCRDGVFRTVYCHLHGEPTWNGRILHTHYATGQQAEALVEHGDIRCLGPRC DKPAGHTLQNPVDGVTAYYGRDSGFRMDSEAREYRSFREAIATESTEEVRFHYVFIDGYW KVMYRTPEGWKMKALALALRRCPK >gi|299856405|gb|ADWV01000046.1| GENE 8 4810 - 4998 77 62 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0059 NR:ns ## KEGG: SeHA_A0059 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 16 62 1 47 47 77 100.0 2e-13 MRGIYSWTPSPLLTVMCSVGDLLPRSGGGMACQAAGKPWQAYACLKCRRAAPAALPFLPV MV >gi|299856405|gb|ADWV01000046.1| GENE 9 4937 - 5437 551 166 aa, chain - ## HITS:1 COG:YPMT1.61c KEGG:ns NR:ns ## COG: YPMT1.61c COG4734 # Protein_GI_number: 16082851 # Func_class: R General function prediction only # Function: Antirestriction protein # Organism: Yersinia pestis # 2 164 4 166 168 167 55.0 6e-42 MSVVAPAVYVGTWHKYNCGSIAGRWFDLTTFDDERDFFAACRALHQDEADPELMFQDYEG FPGNMASECHINWAWVEGFRLARDEGCEEAYRLWVEDTGETDFDTFRDAWWGEADSEEAF AVEFASDTGLLADVPETVALYFDYEAYARDLFLDSFTFIDGHVFRR >gi|299856405|gb|ADWV01000046.1| GENE 10 5899 - 6258 330 119 aa, chain - ## HITS:1 COG:no KEGG:SC115 NR:ns ## KEGG: SC115 # Name: gp43 # Def: hypothetical protein # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 7 119 86 198 198 202 93.0 3e-51 MNENTTLNALICRHARKALSGERMAARDRNADLAWIGQQLVDAAWFVRATLEAHGMSVGN ESPPAPPETMPDIQTRELVMLIKRLASSLKAVKPDSCVVREAQDWLRDRKLVDITDILR >gi|299856405|gb|ADWV01000046.1| GENE 11 6304 - 6738 363 144 aa, chain - ## HITS:1 COG:no KEGG:ECSE_P2-0029 NR:ns ## KEGG: ECSE_P2-0029 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 144 1 144 144 273 100.0 1e-72 MYGTCETLCRELAVKYPGDMPLMLVIWSPEEIQALADGMDISLSDHEIRTVLARLEDIPE DQRTESGISSGVAMEIINNVSENRQVTVPAELLASLIQTAEQALWKREWAARDHGLAVPE CVTRRQAVINQARTLLKNNRHEND >gi|299856405|gb|ADWV01000046.1| GENE 12 6752 - 6973 304 73 aa, chain - ## HITS:1 COG:no KEGG:ECSE_P1-0048 NR:ns ## KEGG: ECSE_P1-0048 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 73 1 73 73 122 97.0 5e-27 MNYAGHEKLRAEVAEVANAMCDLRTTMNEMEQRYSFNADTLPERLVRQTLFRANRLLMEA YTEILELEACFKD >gi|299856405|gb|ADWV01000046.1| GENE 13 6974 - 7657 653 227 aa, chain - ## HITS:1 COG:YPMT1.64c KEGG:ns NR:ns ## COG: YPMT1.64c COG0863 # Protein_GI_number: 16082855 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Yersinia pestis # 1 227 1 225 225 425 88.0 1e-119 MSRFVLGNCIDVMARIPDNAIDFILTDPPYLVGFRDRSGRTIAGDKTDEWLQPACNEMFR VLKKDALMVSFYGWNRVDRFMAAWKNAGFSVVGHLVFTKNYTSKAAYVGYRHECAYILAK GRPRLPQNPLPDVLGWKYSGNRHHPTEKPVTSLQPLIENFTHPNAIVLDPFAGSGSTCVA ALQSGRRYIGIELLEQYHRAGQQRLAAVQRAMQQGAANDDWFMPEAA >gi|299856405|gb|ADWV01000046.1| GENE 14 8042 - 8968 697 308 aa, chain - ## HITS:1 COG:no KEGG:ECO26_p1-53 NR:ns ## KEGG: ECO26_p1-53 # Name: not_defined # Def: conserved predicted protein # Organism: E.coli_O26_H11 # Pathway: not_defined # 1 308 1 308 308 604 96.0 1e-171 MPNWCSNRMHFSGEPAQIAEIKRLASGAVTPFYRRATNEGIQLFLAGSAGLLQTTEDVWF EPCPGLTAAGRGVVSPENIAFTRWLTHLQNGVLLDEQNCLMLHELWLQSGTGQRRWEGLP DDVRDTITALFTAKRGDWCGFWSNEDVSVWWNRLCDNVLPEKTMPFDLLTVLPTRLDVEV NGFNGGVLNGVPSAYHWYTEQYGVKWPCGYDLNISSQGDNFIQVDFDTPWCQPESDVIAE LSRRFSCTLEHWYAEQGCDFCGWQLYERGELVDVLWGELEWSSPTDDDELPEVTGPAWIV DKVAHYGG >gi|299856405|gb|ADWV01000046.1| GENE 15 9362 - 9541 152 59 aa, chain + ## HITS:1 COG:no KEGG:SeHA_A0038 NR:ns ## KEGG: SeHA_A0038 # Name: not_defined # Def: protein ImpC # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 43 1 43 82 78 93.0 9e-14 MIRIEILFDRQSTKKLKSGTLQALQNEIEQRLKPHYPEIWLHMWESPSFRVRSCQPALH >gi|299856405|gb|ADWV01000046.1| GENE 16 9625 - 10017 306 130 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_D0012 NR:ns ## KEGG: EcE24377A_D0012 # Name: not_defined # Def: stable plasmid inheritance protein # Organism: E.coli_E24377A # Pathway: not_defined # 1 130 1 130 130 239 99.0 2e-62 MYEGEERKKLSLYLHPEDSADCLALAEIETVPRKKRGELYRQALITGLIMHQLDERIPAV LTALFTRELNADEVISQIARITGWKPSSGDLKEVLKALGGLQSTVSPEHSQDDGEQARLK AARVKMQNLI >gi|299856405|gb|ADWV01000046.1| GENE 17 10021 - 10995 694 324 aa, chain - ## HITS:1 COG:no KEGG:EcE24377A_D0013 NR:ns ## KEGG: EcE24377A_D0013 # Name: parM # Def: plasmid segregation protein ParM # Organism: E.coli_E24377A # Pathway: not_defined # 1 324 1 324 324 630 99.0 1e-179 MRIFCDDGSTNVKLAWFEGKTLKSAVSVNSFRHNWKVEGLGSSRTYNYLLDGRKYTYDPV SEDAISTTHIEYQYSDTNVLAVHHALLNSGIEPQEIDLTVTLPISEFYTADCQKNTLNIE RKIRNLMREVTLNKGGTFTIKSVEVMPESLPAVFTRLVADNVGQYEKSLVIDLGGTTLDV GVIVGQFEDVSAVHGNPDIGVSMVTKATLTALKMASSDTSPMIADELIKNRNNLDFVGQV VNEVSKLNLVLDTIDTAINKLGELVVDDLLQYRNVNRVYIVGGGAALIADAVRKAWNHLG EKVVLMDEPQTALVQAIARFKAEE >gi|299856405|gb|ADWV01000046.1| GENE 18 11234 - 11608 124 124 aa, chain - ## HITS:1 COG:no KEGG:YEP0071 NR:ns ## KEGG: YEP0071 # Name: not_defined # Def: hypothetical protein # Organism: Y.enterocolitica # Pathway: not_defined # 1 121 3 99 102 80 56.0 2e-14 MADASKLRTKRTRSGLGVPPGPDEVATSLNAPEIAPAVAATDVQRQQADSSPVHHEPVVT QTVTEVYTRRDGRSARKTNRTLAFATRVTPAFDQEIRDIAEREGLKLVEVLEKAVEAYKE KQGY >gi|299856405|gb|ADWV01000046.1| GENE 19 11608 - 12240 373 210 aa, chain - ## HITS:1 COG:no KEGG:YpsIP31758_B0108 NR:ns ## KEGG: YpsIP31758_B0108 # Name: not_defined # Def: hypothetical protein # Organism: Y.pseudotuberculosis_IP31758 # Pathway: not_defined # 1 208 1 208 209 310 77.0 2e-83 MAWIVGFISQKGGVGKSTKARALAREASACGIKTKLADLDLEQATSAEWHRRRLSAGLSP VASVEVFSTAKQAIESAGDFDLLILDGPARASKGTSEIAKVADLIVQPTGASLDDLVPAI KVFNALVKEGIPRSKLVFALSRVGTEAEELDARAYISEAGYETLSGCLFEKPAYRKAMNS GLAVTETRYKGLNERADELIQALIDKIGEE >gi|299856405|gb|ADWV01000046.1| GENE 20 12367 - 12570 82 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|300820003|ref|ZP_07100183.1| ## NR: gi|300820003|ref|ZP_07100183.1| hypothetical protein HMPREF9345_05102 [Escherichia coli MS 107-1] # 27 67 1 41 41 72 100.0 6e-12 MIFQHDSSNKIDCSYHAVHIRPSALFMLCYLQSCGNLASSVDAILNEVSFIVNVTQVFGC QFQHSAK >gi|299856405|gb|ADWV01000046.1| GENE 21 12824 - 13609 483 261 aa, chain - ## HITS:1 COG:PSLT031 KEGG:ns NR:ns ## COG: PSLT031 COG0582 # Protein_GI_number: 17233417 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Salmonella typhimurium LT2 # 14 256 15 257 260 380 88.0 1e-105 MQHLPAPIHHARDAAQLPVAIDYPAALALRQMSMVHDELPKYLLAPEVSALLHYVPDLRR KMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATLKQRTEKAARTAGRMPAGQQTH RLVPLSDAWYVSQLQTMVATLKIPMERRNKRTGRTEKARIWEVTDRTVRTWIGEAVAAAA ADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARH RVQFAMPEADAVALIKQLERR >gi|299856405|gb|ADWV01000046.1| GENE 22 13611 - 14024 420 137 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0030 NR:ns ## KEGG: SeHA_A0030 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 137 14 150 150 284 99.0 8e-76 MFFIENEGQAVAGTDYWQSVQAQAGYVYLSWNAGAARLLVPDAAKHLLREMRGAEYVIIS KGALHGRDALELVFEDGSDAPFVIHMLSEQCDRLLPENNQGGGFVVTVWTRGGNQLRYPG KYRVVENLPDVSPWSEH >gi|299856405|gb|ADWV01000046.1| GENE 23 14586 - 14816 202 76 aa, chain + ## HITS:1 COG:no KEGG:KPN_pKPN4p07074 NR:ns ## KEGG: KPN_pKPN4p07074 # Name: vagC # Def: virulence-associated protein # Organism: K.pneumoniae # Pathway: not_defined # 1 76 1 76 76 139 100.0 2e-32 MRTVSIFKNGNNRAIRLPRDLDFEGVSELEIVREGDSIILRPVRPTWGSFAQFEKADPDF MAEREDVVSDEGRFNL >gi|299856405|gb|ADWV01000046.1| GENE 24 14813 - 15229 376 138 aa, chain + ## HITS:1 COG:STM3033 KEGG:ns NR:ns ## COG: STM3033 COG1487 # Protein_GI_number: 16766335 # Func_class: R General function prediction only # Function: Predicted nucleic acid-binding protein, contains PIN domain # Organism: Salmonella typhimurium LT2 # 5 136 4 131 132 110 42.0 1e-24 MNKTYMLDTCICSFIMREQPEAVLKRLEQAVLRGQRIVVSAITYSEMRFGATGPKASPRH VELVDAFCARLDAILPWDRAAVDATTEIKVALRMAGTPIGPNDTAIAGHAIAAGAVLVTN NTREFERVPGLVLEDWVR >gi|299856405|gb|ADWV01000046.1| GENE 25 15303 - 15539 190 78 aa, chain + ## HITS:1 COG:no KEGG:KPN_pKPN4p07072 NR:ns ## KEGG: KPN_pKPN4p07072 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 73 1 73 236 144 100.0 1e-33 MPLITRLMLQNFKKFPELDLRFTHDRNILVGDNESGKSTILLALDLVLSDSRHRVEALGV ESLLSQSAVRQFQGHCCK >gi|299856405|gb|ADWV01000046.1| GENE 26 15586 - 15757 116 57 aa, chain + ## HITS:1 COG:Cgl0933 KEGG:ns NR:ns ## COG: Cgl0933 COG3316 # Protein_GI_number: 19552183 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 57 1 57 236 96 73.0 1e-20 MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPE Prediction of potential genes in microbial genomes Time: Sun May 15 16:00:22 2011 Seq name: gi|299856404|gb|ADWV01000047.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont46.1, whole genome shotgun sequence Length of sequence - 14737 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 3, operones - 2 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 12 - 1460 730 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 1474 - 1517 8.2 + Prom 1602 - 1661 5.0 2 2 Op 1 . + CDS 1708 - 1905 136 ## G2583_1863 two-component-system connector protein YneN 3 2 Op 2 2/0.000 + CDS 1980 - 2741 338 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 2789 - 2825 3.0 4 2 Op 3 4/0.000 + CDS 3144 - 4826 1330 ## COG3119 Arylsulfatase A and related enzymes + Term 4839 - 4871 5.0 5 2 Op 4 1/0.000 + CDS 4878 - 6035 476 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) + Term 6088 - 6127 5.0 + Prom 6194 - 6253 7.4 6 3 Op 1 . + CDS 6419 - 8011 176 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 7 3 Op 2 . + CDS 8049 - 10421 1921 ## EcE24377A_1685 TonB-dependent receptor + Term 10441 - 10470 -0.5 8 3 Op 3 3/0.000 + CDS 10478 - 13261 1851 ## COG0612 Predicted Zn-dependent peptidases + Term 13268 - 13304 6.3 + Prom 13416 - 13475 6.7 9 3 Op 4 . + CDS 13623 - 14736 1181 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins Predicted protein(s) >gi|299856404|gb|ADWV01000047.1| GENE 1 12 - 1460 730 482 aa, chain + ## HITS:1 COG:ECs2106 KEGG:ns NR:ns ## COG: ECs2106 COG0243 # Protein_GI_number: 15831360 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli O157:H7 # 1 482 278 759 759 967 99.0 0 MRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEWKDI ERISGLSQTQIAELADAYAAAERTIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGA GICPLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPQAPGHAAIASMQAICTGQAR ALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDM QKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQATLPQSVVAWEYLVEDY DRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANFITSKGLLEDPSSA FNSKLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIAL TPDGKRSSRRMDRLKVVIYPMADRSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEP SN >gi|299856404|gb|ADWV01000047.1| GENE 2 1708 - 1905 136 65 aa, chain + ## HITS:1 COG:no KEGG:G2583_1863 NR:ns ## KEGG: G2583_1863 # Name: not_defined # Def: two-component-system connector protein YneN # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 65 1 65 65 88 96.0 8e-17 MHATTVKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQLGISEMGRIARDLTHFII NSLQD >gi|299856404|gb|ADWV01000047.1| GENE 3 1980 - 2741 338 253 aa, chain + ## HITS:1 COG:ydeO KEGG:ns NR:ns ## COG: ydeO COG2207 # Protein_GI_number: 16129458 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Escherichia coli K12 # 1 253 1 253 253 506 99.0 1e-143 MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFTENTIKK YLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERNHHNFSELLLFSCLSIFAA CKGFITLLTNGVLSVSGKVRNIVNMKLAHPWKLKDICDCLYISESLLKKKLKQEQTTFSQ ILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVSKEYRCQSHT GMNTGNTMSALAI >gi|299856404|gb|ADWV01000047.1| GENE 4 3144 - 4826 1330 560 aa, chain + ## HITS:1 COG:ydeN KEGG:ns NR:ns ## COG: ydeN COG3119 # Protein_GI_number: 16129457 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Escherichia coli K12 # 1 560 12 571 571 1090 100.0 0 MKSALKKSVVSTSISLILASGMAAFAAHAADDVKLKATKTNVAFSDFTPTEYSTKGKPNI IVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAIEAAQKSTPTLLSLMDEGV RFTNGYVAHGVSGPSRAAIMTGRAPARFGVYSNTDAQDGIPLTETFLPELFQNHGYYTAA VGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAEEWQPQNRGFDYFMGFHAAGTAYYNSPS LFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPFMLYLAYNAPHLPNDNPAPDQYQKQ FNTGSQTADNYYASVYSVDQGVKRILEQLKKNGQYDNTIILFTSDNGAVIDGPLPLNGAQ KGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKLISAMDFYPTALDAADISIPKDLKLDGVS LLPWLQDKKQGEPHKNLTWITSYSHWFDEENIPFWDNYHKFVRHQSDDYPHNPNTEDLSQ FSYTVRNNDYSLVYTVENNQLGLYKLTDLQQKDNLAAANPQVVKEMQGVVREFIDSSQPP LSEVNQEKFNNIKKALSEAK >gi|299856404|gb|ADWV01000047.1| GENE 5 4878 - 6035 476 385 aa, chain + ## HITS:1 COG:ydeM KEGG:ns NR:ns ## COG: ydeM COG0641 # Protein_GI_number: 16129456 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Escherichia coli K12 # 1 385 6 390 390 793 99.0 0 MHVTAKPSSFQCNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIKQYIAASGNQVYFTWQG GEPTLAGLDFFRKVIHYQQRYAGQKRIFNALQTNGILLNNEWCAFLKEHEFLVGISIDGP QELHDRYRRSNSGNGTFAKVIAAIERLKSYQVEFNTLTVINNVNVHYPLEVYHFLKSIGS KHMQFIELLETGTPNIDFSGHSENTFRIIDFSVPPTAYGKFMSTIFMQWVKNDVGEIFIR QFESFVSRFLGNGHTSCIFQESCKDNLVVESNGDIYECDHFVYPQYKIGNINKSELKTMN SVQLTAQKKRISAKCLKCAYKPICNGGCPKHRITKVNNETVSYFCEGYKILFSTMVPYMN AMVELAKNRVPLYHIMDVAKQMENN >gi|299856404|gb|ADWV01000047.1| GENE 6 6419 - 8011 176 530 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 333 514 2 202 223 72 25 2e-12 MLLIIIILAMILGVVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPALLGIFVLISVN KTWLIKLLTIRWREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKT LSLSFGFIQSLSMLITFTVILWQSAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHK VGKRIRPLNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELSDNFHTIKENWHRL MNRQRWLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFMLVSNNLSWFIYK YDELAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVANASIRTPDNKIILENLNFHVS PGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKSGLLKEIICKA LPLPVDDKSLSEVLHQVGLGKLAARIHEHDRWGDILSSGEKQRIALARLILRRPKWIFLD ETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQPGVWNLADDICDISTVL >gi|299856404|gb|ADWV01000047.1| GENE 7 8049 - 10421 1921 790 aa, chain + ## HITS:1 COG:no KEGG:EcE24377A_1685 NR:ns ## KEGG: EcE24377A_1685 # Name: not_defined # Def: TonB-dependent receptor # Organism: E.coli_E24377A # Pathway: not_defined # 1 790 1 790 790 1520 100.0 0 MKRVLIPGVILCGADVAQAVDDKNMYMHFFEEMTVYAPVPVPVNGNTHYTSESIERLPTG NGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPYQNAYLIDGISATNNLNPA NESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFGRFNGGVIDAKIKRFNADDSK VKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYYSPDFKKNFYTLSFNQELADNFGVTA GLSRRQSDITRADYVSNDGIVAGRAQYKNVIDTALSKFTWFASDRFTHDLTLKYTGSSRD YNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLRTTVGWDHISDYTRHDHDIWYTELSCT YGDITGRCTRGGLGHISQAVDNYTFKTRLDWQKFAVGNVSHQPYFGAEYIYSDAWTERHN QSESYVINAAGKKTNHTIYHKGKGSLGIDNYTLYMADHISWRNVSLMPGVRYDYDNYLSN HNISPRFMTEWDIFADQTSMITAGYNRYYGGNILDMGLRDIRNSWTESVSGNKTLTRYQN LKTPYNDELAMGLQQKIGKNVIARANYVYREAHDQISKSSRTDSATKTTITEYNNDGKTK THSFSLSFELAEPLHIRQVDINPQIVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVS YDSVPVADFNNPLKISLNMDFTHQPSGLVWANTLAWQEARKARIILGKTNAQYISEYSDY KQYVDEKLDSSLTWDTRLSWTPQFLKQQNLTISADILNVLDSKTAVDTTNTGVATYASGR TFWLDVSMKF >gi|299856404|gb|ADWV01000047.1| GENE 8 10478 - 13261 1851 927 aa, chain + ## HITS:1 COG:pqqL KEGG:ns NR:ns ## COG: pqqL COG0612 # Protein_GI_number: 16129453 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Escherichia coli K12 # 1 927 5 931 931 1684 99.0 0 MRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLGNGLRYMIYPHAHPKDQVNLWLQI HTGSLQEEDNERGVAHFVEHMMFNGTKTWPGNKVIETFESMGLRFGRDVNAYTSYDETVY QVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAERGVITEEWRAHQDAKWRTSQARRP FLLANTRNLDREPIGLMDTVATVTPAQLRQFYQRWYQPNNMTFIVVGDIDSKEALALIKD NLSKLPANKAAENRVWPTKAENHLRFNIINDKENRVNGIALYYRLPMVQVNDEQSFIEQA EWSMLVQLFNQRLQERIQSGELKTISGGTARSVKIAPDYQSLFFRVNARDDNMQDAANAL MAELATIDQHGFSAEELDDVKSTRLTWLKNAVDQQAERDLRMLTSRLASSSLNNTPFLSP EETYQLSKRLWQQITVQSLAEKWQQLRKNQDAFWEQMVNNELAAKKALSPAAILALEKEY ANKKLAAYIFPGRNLSLTVDADPQAEISSKETLAENLTSLTLSNGARVILAKSAGEEQKL QITAVSNKGDLSFPAQQKSLIALANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMN TLLSVSARTNNPEPGFQLINQRITHSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMY ETRYADDRTKLLQENQIVQFTAADALAADRQLFSSPADITFVIVGNVSEDKLVALITRYL GSIKHSDSPLAAGKPLTRATDNASVTVKEQNEPVAQFSQWKRYDSRTPVNLATRMALDAF NVALAKDLRVNIREQASGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMV KRLAKGISEQELNEYQQNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQM TVENVNTAVKQYLSHPVNTYTGVLLPK >gi|299856404|gb|ADWV01000047.1| GENE 9 13623 - 14736 1181 371 aa, chain + ## HITS:1 COG:ECs2098 KEGG:ns NR:ns ## COG: ECs2098 COG0076 # Protein_GI_number: 15831352 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Escherichia coli O157:H7 # 1 371 1 371 466 799 100.0 0 MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNL ATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVG TNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREI PMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDM HIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELV FNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKL GPYEFICTGRP Prediction of potential genes in microbial genomes Time: Sun May 15 16:00:37 2011 Seq name: gi|299856403|gb|ADWV01000048.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont47.1, whole genome shotgun sequence Length of sequence - 13965 bp Number of predicted genes - 19, with homology - 19 Number of transcription units - 11, operones - 6 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.500 - CDS 2 - 161 92 ## COG3316 Transposase and inactivated derivatives - Term 170 - 205 2.0 2 1 Op 2 . - CDS 208 - 1446 800 ## COG2801 Transposase and inactivated derivatives - Prom 1673 - 1732 2.5 3 2 Op 1 . - CDS 1764 - 2612 393 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 4 2 Op 2 . - CDS 2652 - 2933 365 ## COG3668 Plasmid stabilization system protein 5 2 Op 3 . - CDS 2930 - 3199 249 ## ECSE_P2-0092 hypothetical protein - Prom 3224 - 3283 4.8 6 3 Tu 1 . - CDS 4108 - 5139 832 ## SeHA_A0002 replication initiation protein - Prom 5208 - 5267 3.0 + Prom 5959 - 6018 6.3 7 4 Op 1 . + CDS 6157 - 6375 129 ## gi|83404893|ref|YP_424908.1| hypothetical protein pCoo129 8 4 Op 2 . + CDS 6293 - 6580 125 ## SeHA_A0131 TraA + Term 6585 - 6618 4.1 + Prom 6939 - 6998 1.8 9 5 Tu 1 . + CDS 7022 - 7555 -210 ## ECSE_P1-0123 TraB protein + Term 7565 - 7594 3.5 + Prom 7631 - 7690 2.2 10 6 Op 1 . + CDS 7809 - 8492 301 ## SeHA_A0127 hypothetical protein 11 6 Op 2 . + CDS 8506 - 8799 182 ## gi|32470266|ref|NP_863490.1| hypothetical protein R64_p134 + Term 8826 - 8861 -0.8 - Term 8488 - 8522 -1.0 12 7 Tu 1 . - CDS 8764 - 8931 62 ## COG3328 Transposase and inactivated derivatives - Prom 9116 - 9175 3.5 13 8 Op 1 23/0.000 + CDS 8888 - 9253 210 ## COG2963 Transposase and inactivated derivatives + Term 9354 - 9394 0.8 14 8 Op 2 . + CDS 9736 - 10116 136 ## COG2801 Transposase and inactivated derivatives - Term 10205 - 10238 3.1 15 9 Op 1 . - CDS 10248 - 10649 415 ## COG5426 Uncharacterized membrane protein 16 9 Op 2 2/0.500 - CDS 10706 - 11005 392 ## COG5426 Uncharacterized membrane protein 17 9 Op 3 . - CDS 11019 - 12233 548 ## COG0524 Sugar kinases, ribokinase family - Prom 12320 - 12379 6.8 18 10 Tu 1 . - CDS 12429 - 12545 85 ## COG3436 Transposase and inactivated derivatives 19 11 Tu 1 . - CDS 13776 - 13910 67 ## EcSMS35_1116 putative aspartate ammonia-lyase Predicted protein(s) >gi|299856403|gb|ADWV01000048.1| GENE 1 2 - 161 92 53 aa, chain - ## HITS:1 COG:Cgl0933 KEGG:ns NR:ns ## COG: Cgl0933 COG3316 # Protein_GI_number: 19552183 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 53 1 53 236 87 71.0 4e-18 MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQR >gi|299856403|gb|ADWV01000048.1| GENE 2 208 - 1446 800 412 aa, chain - ## HITS:1 COG:mlr6273 KEGG:ns NR:ns ## COG: mlr6273 COG2801 # Protein_GI_number: 13475245 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 14 406 18 409 535 256 38.0 4e-68 MAGAHEFRQHGFHARRRAEIISPLAQSETVGHEAADMAAQALGLSRRQVYVLIRRARQGS GLVTDLVPGQSGGGKGKGRLPEPVERVIHELLQKRFLTKQKRSLAAFHREVTQVCKAQKL RVPARNTVALRIASLDPRKVIRRREGQDAARDLQGVGGEPPAVTAPLEQVQIDHTVIDLI VVDDRDRQPIGRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVACDKRPWLEGLN VEMDWQMSGKPLLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAM QMIHDELPGTTFSNPDQRGDYDSENKAALTLRELERWLTLAVGTYHGSVHNGLLQPPAAR WAEAVARVGVPAVVTRATSFLVDFLPILRRTLTRTGFVIDHIHYYADGHCCK >gi|299856403|gb|ADWV01000048.1| GENE 3 1764 - 2612 393 282 aa, chain - ## HITS:1 COG:PSLT049 KEGG:ns NR:ns ## COG: PSLT049 COG0847 # Protein_GI_number: 17233424 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Salmonella typhimurium LT2 # 31 156 1 126 138 157 61.0 2e-38 MNNDELATRRAQAIAEDRCFSKGRLRDEFRMKPAPGAEPVKWYKNTYGGRFAVYRIADCV PMREKRPLTSKQQLAGQRLSVLSRLNSTSGRMARQAYDWLSLAPLFLDTETTGLDNTAEA LEIGLTDAAGQVVFETRLKPTVAIGAQAAAVHGISEQALCGAPSWTDVARQLRHAIGDRP VIIFNARFDIRILKQTAAAHSDPADWLEELTVYCAMELAAGYYGATNRYGTISLACAASQ AGLTWEGQAHSAIADARMTAGVVNAIAAYHLELLQEQARLKI >gi|299856403|gb|ADWV01000048.1| GENE 4 2652 - 2933 365 93 aa, chain - ## HITS:1 COG:SMa0473 KEGG:ns NR:ns ## COG: SMa0473 COG3668 # Protein_GI_number: 16262701 # Func_class: R General function prediction only # Function: Plasmid stabilization system protein # Organism: Sinorhizobium meliloti # 2 93 1 91 97 65 43.0 3e-11 MMEIFWTMLASQDRKRIREYIAEQNLMAAIELDERIGYSASSLAGQPYKGRNGRVEGTRE LVIHPHFVLVYEVDSQWGKVYILRVLHTAQKWP >gi|299856403|gb|ADWV01000048.1| GENE 5 2930 - 3199 249 89 aa, chain - ## HITS:1 COG:no KEGG:ECSE_P2-0092 NR:ns ## KEGG: ECSE_P2-0092 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 89 1 89 89 142 98.0 5e-33 MAQVNMSLRIDAELKDAFMAAAKSMDRNGSQLIRDFMRQTVERQHNTWFRDQVAAGRQQL EHGDVLPHDMVESSAAAWRDEMSRKVAGK >gi|299856403|gb|ADWV01000048.1| GENE 6 4108 - 5139 832 343 aa, chain - ## HITS:1 COG:no KEGG:SeHA_A0002 NR:ns ## KEGG: SeHA_A0002 # Name: repZ # Def: replication initiation protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 343 16 358 358 594 99.0 1e-168 MAGLKNTPYNAVHWSQLAPEEQIRFWEDYEAGRATTFLVEPERKRTKRRRGEHSTKPKCE NPSWYRPERYKALSGQLGHAYNRLVKKDPVTGEQSLRMHMSLHPFYVQKRTYVGRKYAFR PEKQRLLDAVWPVLVSFSDAGTHTVGMSVSRLAREISPKDSKGKVIPELEVTVSRLSRLL AEQVRFGVLGVSEETLWDRETRQRLPRYVWITPAGWQMLGVDMVKLHEQQQKRLRESEIR QQLIREGVLREDEDISVHAARKRWYLQRSQDALKHRRAKAAASKRARRLKKLPADQQIHE MAEYLRKRLPPDEAYFCSDDHLKRMAIRELRQLELTLAAPPPH >gi|299856403|gb|ADWV01000048.1| GENE 7 6157 - 6375 129 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|83404893|ref|YP_424908.1| ## NR: gi|83404893|ref|YP_424908.1| hypothetical protein pCoo129 [Escherichia coli] # 1 72 16 87 87 141 100.0 2e-32 MVAQAGQALAWPVSDDAGIPTPVWAITNERRNSVIAFLVVIGDLCYVTSTDTETPGHHSV GRHVSRAINKPA >gi|299856403|gb|ADWV01000048.1| GENE 8 6293 - 6580 125 95 aa, chain + ## HITS:1 COG:no KEGG:SeHA_A0131 NR:ns ## KEGG: SeHA_A0131 # Name: not_defined # Def: TraA # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 95 1 95 95 178 100.0 6e-44 MSPQLIQKLPAITLLEGMFPELSTNQLKVCVFYAMGVPYDAIAQNCRLSPETVRTYLKRS LKNLNLEGYDALRSAVLMRTFVFMISNTAKENEKM >gi|299856403|gb|ADWV01000048.1| GENE 9 7022 - 7555 -210 177 aa, chain + ## HITS:1 COG:no KEGG:ECSE_P1-0123 NR:ns ## KEGG: ECSE_P1-0123 # Name: not_defined # Def: TraB protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 177 1 177 177 361 99.0 8e-99 MNIEHLNNRNWYLAQYNTAGKNRESLFSWLNEQNVVPWTPLITRKIRRADSRCCYRERIF AIFPGYFFILANFDIHPVSALRRHSAFIDFVKFGGEIKPVNKDIVDGLMKIYPDPVLNPG AREELNAASSIWLTKAQYQYLLRMENTLQPESRISLLLELVSNAEHHGFMERLVNIP >gi|299856403|gb|ADWV01000048.1| GENE 10 7809 - 8492 301 227 aa, chain + ## HITS:1 COG:no KEGG:SeHA_A0127 NR:ns ## KEGG: SeHA_A0127 # Name: not_defined # Def: hypothetical protein # Organism: S.enterica_Heidelberg # Pathway: not_defined # 1 227 1 227 227 449 99.0 1e-125 MTTTEHPVRQLLWCALNALKTAQENHNITSETGLRHYLLEWLSGASRHPEFRSLPGEIMA LKALTEKDRNIPIIGTLNTLFLSSATVGECPLFRFRAALGKLQKAGWRTYVCPWPERVFN ESIERACSGKRHLLQLSRTEECFLPTGDMRAPVTLQLITPLHRKTMQLLEAAELIFSDEG FQVVRGYEHQFGIERRETLFHTLFIGLPSLPEDVWGATQEQTTITLH >gi|299856403|gb|ADWV01000048.1| GENE 11 8506 - 8799 182 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|32470266|ref|NP_863490.1| ## NR: gi|32470266|ref|NP_863490.1| hypothetical protein R64_p134 [Salmonella typhimurium] # 1 97 1 97 188 185 100.0 1e-45 MKLQYRIPLAIYSVWCIIAILLCKDGLYQMNIWTLVEILGMIALPLLVRPFFILLRIIFR KNSFKTKDMSDNHTVCVFLSALADTSSKKAIKKHFKQ >gi|299856403|gb|ADWV01000048.1| GENE 12 8764 - 8931 62 55 aa, chain - ## HITS:1 COG:Z1827 KEGG:ns NR:ns ## COG: Z1827 COG3328 # Protein_GI_number: 15801298 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 47 1 47 117 87 93.0 4e-18 MVRRLRFSGPKTSIICSPMTSLKTSIKTITYLSDIGCLEIQGASLLLEVFFYRLL >gi|299856403|gb|ADWV01000048.1| GENE 13 8888 - 9253 210 121 aa, chain + ## HITS:1 COG:yi21_g3 KEGG:ns NR:ns ## COG: yi21_g3 COG2963 # Protein_GI_number: 16129938 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 121 16 136 136 208 99.0 2e-54 MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTA VAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDG E >gi|299856403|gb|ADWV01000048.1| GENE 14 9736 - 10116 136 126 aa, chain + ## HITS:1 COG:yi22 KEGG:ns NR:ns ## COG: yi22 COG2801 # Protein_GI_number: 16132094 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 126 176 301 301 256 96.0 6e-69 MLGAVERRFGNELPASPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAES FVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQQASNGLSD NRCLEI >gi|299856403|gb|ADWV01000048.1| GENE 15 10248 - 10649 415 133 aa, chain - ## HITS:1 COG:STM3548 KEGG:ns NR:ns ## COG: STM3548 COG5426 # Protein_GI_number: 16766834 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Salmonella typhimurium LT2 # 1 133 120 252 253 239 79.0 1e-63 MIGGYLSFMGIEAKANYKNTVLADVLPVTMLDGDDRVEKPEGVIAQPSQPDHPVIKGFSE YPFFLGYNRAIAKENAEVVLTINNDPLLVFGNYHNGKIACFMSDCSPHWGTQQFMSWPFY TALWVNILTHIAR >gi|299856403|gb|ADWV01000048.1| GENE 16 10706 - 11005 392 99 aa, chain - ## HITS:1 COG:STM3548 KEGG:ns NR:ns ## COG: STM3548 COG5426 # Protein_GI_number: 16766834 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Salmonella typhimurium LT2 # 1 95 1 95 253 171 82.0 2e-43 MNNTKKSLKVLFIGESWHIHMIHSKGYDSFTSSKYEEGATWLLQCLKNSQVDVTYMPAHT VQIAFPEDVAQLEQYDAIVISDIGSNTFLLQNDTFISFA >gi|299856403|gb|ADWV01000048.1| GENE 17 11019 - 12233 548 404 aa, chain - ## HITS:1 COG:STM3547_2 KEGG:ns NR:ns ## COG: STM3547_2 COG0524 # Protein_GI_number: 16766833 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 94 404 2 312 312 496 82.0 1e-140 MKFERHHEILKRLSKFGSVKVSDLSNSLNVTKETIRSDLNELARLGYLTRCHGGAFIVLD SLDTIAKNEIAYALENYDTAQGIKKGHSTMKSQVCVIGSFNVDIISYLPRLPTIGESLLA SNFIFSPGGKGCNQALAASFADTDVYFITKVGTDHFSDYAINFMNSSKIYKSIIYQTKET QTGTATILVNEGTGDNVIAIYPGANMTMSSDEITIQKEAIINSDVILLQLETNYTALQQA ITLAQKNSIPVIINPAPYNDIVNELIQDVDYITPNETEAGLLSGIDVHDLESAKRAAEAI HNKGVKNTVITLGSKGSLAFDGKKFIHSPAFPAVVKNTAGAGDAFNGALASGLAKGKSLE SALCYASAFASLAVETSNASDMPEHESVIHRIQSIHYQQTIFTH >gi|299856403|gb|ADWV01000048.1| GENE 18 12429 - 12545 85 38 aa, chain - ## HITS:1 COG:ECs1339 KEGG:ns NR:ns ## COG: ECs1339 COG3436 # Protein_GI_number: 15830593 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 38 477 518 537 67 78.0 5e-12 MFFDGERSALLYGLIGTCLLNDIDPEEYLRHILSVLPE >gi|299856403|gb|ADWV01000048.1| GENE 19 13776 - 13910 67 44 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_1116 NR:ns ## KEGG: EcSMS35_1116 # Name: not_defined # Def: putative aspartate ammonia-lyase # Organism: E.coli_SECEC # Pathway: Alanine, aspartate and glutamate metabolism [PATH:ecm00250]; Nitrogen metabolism [PATH:ecm00910]; Metabolic pathways [PATH:ecm01100] # 1 44 423 466 466 97 100.0 1e-19 MAHEAYHTGKSLHQIVVVERKLLTQEEWEKTFNLDNLIAPKFEQ Prediction of potential genes in microbial genomes Time: Sun May 15 16:01:06 2011 Seq name: gi|299856402|gb|ADWV01000049.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont48.1, whole genome shotgun sequence Length of sequence - 14059 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 5, operones - 1 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 1 - 346 100.0 # CP000946 [R:4420328..4423307] # 23S ribosomal RNA # Escherichia coli ATCC 8739 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. + 5S_RRNA 428 - 558 98.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. - Term 562 - 595 6.1 1 1 Tu 1 . - CDS 675 - 1118 414 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 1138 - 1197 3.5 + Prom 1094 - 1153 4.8 2 2 Op 1 5/0.000 + CDS 1275 - 2204 936 ## COG1897 Homoserine trans-succinylase + Term 2250 - 2278 1.0 + Prom 2290 - 2349 7.7 3 2 Op 2 7/0.000 + CDS 2473 - 4074 1572 ## COG2225 Malate synthase 4 2 Op 3 5/0.000 + CDS 4104 - 5408 1510 ## COG2224 Isocitrate lyase + Term 5631 - 5674 2.1 + Prom 5426 - 5485 2.5 5 2 Op 4 . + CDS 5689 - 7425 1317 ## COG4579 Isocitrate dehydrogenase kinase/phosphatase 6 3 Tu 1 . - CDS 7394 - 8968 307 ## COG0666 FOG: Ankyrin repeat - Prom 8993 - 9052 5.6 7 4 Tu 1 . - CDS 9285 - 10109 741 ## COG1414 Transcriptional regulator - Prom 10269 - 10328 3.7 + Prom 10081 - 10140 4.7 8 5 Tu 1 . + CDS 10294 - 13992 4317 ## COG1410 Methionine synthase I, cobalamin-binding domain + Term 14025 - 14059 6.7 Predicted protein(s) >gi|299856402|gb|ADWV01000049.1| GENE 1 675 - 1118 414 147 aa, chain - ## HITS:1 COG:ECs4930 KEGG:ns NR:ns ## COG: ECs4930 COG0454 # Protein_GI_number: 15834184 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Escherichia coli O157:H7 # 1 147 1 147 147 296 97.0 7e-81 MVISIRRSQHEEGEELVAIWCRSVDATHDFLSAEYRAELEELVRSFLPEAPLWVAVNERD QPVGFMLLSGQHMDALFIDPDVRGCGVGRMLVEHALSMAPELTTNVNEQNEQAVGFYKKV GFKVTGRSEVDDLGKPYPLLNLAYVGE >gi|299856402|gb|ADWV01000049.1| GENE 2 1275 - 2204 936 309 aa, chain + ## HITS:1 COG:ECs4931 KEGG:ns NR:ns ## COG: ECs4931 COG1897 # Protein_GI_number: 15834185 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Escherichia coli O157:H7 # 1 309 1 309 309 625 99.0 1e-179 MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLMPKKIETENQFLRLLSN SPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQEQNFDGLIVTGAPLGLVEFNDVAY WPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTRTDKLSGVYEHHILHPHALLT RGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGDAYLFASKDKRIAFVTGHPEYDA QTLAQEYFRDVEAGLGPEVPYNYFPHNDPQNTPRASWRSHGNLLFTNWLNYYVYQITPYD LRHMNPTLD >gi|299856402|gb|ADWV01000049.1| GENE 3 2473 - 4074 1572 533 aa, chain + ## HITS:1 COG:aceB KEGG:ns NR:ns ## COG: aceB COG2225 # Protein_GI_number: 16131840 # Func_class: C Energy production and conversion # Function: Malate synthase # Organism: Escherichia coli K12 # 1 533 1 533 533 1101 98.0 0 MTEQATTTDELAFIRPYGEQEKQILTAEAVEFLTELVTHFTPQRNKLLAARIQQQQDIDN GTLPDFISETASIRDTDWKIRGIPADLQDRRVEITGPVERKMVINALNANVKVFMADFED SLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNPAVLICRVRGLHLPEKHVTWR GEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPR GTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQA VTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIPSKDEERNNQVLNKVKADKALEANNG HDGTWIAHPGLADTAMAVFNDILGSRKNQLEVMREQDVPITADQLLAPCDGERTEEGMRA NIRVAVQYIEAWISGNGCVPIYGLMEDAATAEISRTSIWQWIHHQKTLSNGKPVTKALFR QMLGEEMKVIASELGEERFSQGRFDDAARLMEQITTSDELIDFLTLPGYRLLA >gi|299856402|gb|ADWV01000049.1| GENE 4 4104 - 5408 1510 434 aa, chain + ## HITS:1 COG:aceA KEGG:ns NR:ns ## COG: aceA COG2224 # Protein_GI_number: 16131841 # Func_class: C Energy production and conversion # Function: Isocitrate lyase # Organism: Escherichia coli K12 # 1 434 1 434 434 863 99.0 0 MKTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSVNPECTLAQLGAAKMWRLLHGE SKKGYINSLGALTGGQALQQAKAGIEAVYLSGWQVAADANLAASMYPDQSLYPANSVPAV VERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVADAEAGFGGVLNAFELMKAMIEAGA AAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLAADVTGVPTLLVARTDADAADL ITSDCDPYDSEFITGERTSEGFFRTHAGIEQAISRGLAYAPYADLVWCETSTPELELARR FAQAIHAKYPGKLLAYNCSPSFNWQKNLDDKTIASFQQQLSDMGYKFQFITLAGIHSMWF NMFDLANAYAQGEGMKHYVEKVQQPEFAAAKDGYTFVSHQQEVGTGYFDKVTTIIQGGTS SVTAMTGSTEESQF >gi|299856402|gb|ADWV01000049.1| GENE 5 5689 - 7425 1317 578 aa, chain + ## HITS:1 COG:aceK KEGG:ns NR:ns ## COG: aceK COG4579 # Protein_GI_number: 16131842 # Func_class: T Signal transduction mechanisms # Function: Isocitrate dehydrogenase kinase/phosphatase # Organism: Escherichia coli K12 # 1 578 1 578 578 1189 99.0 0 MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKNRIHLYDHHVGL VVEQLRCITNGQSTDAAFLLRVKEHYTRLLPDYPRFEIAESFFNSVYCRLFDHRSLTPER LFIFSSQPERRFRTIPRPLAKDFHPDHGWESLLMRVISDLPLRLRWQNKSRDIHYIIRHL TETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSGTLPFLLPIHQTDDGELFIDTCL TTTAEASIVFGFARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYRE YLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRVFKVIKDKFAPQKEMSAAHVRACYQLV KEHDRVGRMADTQEFENFVLEKRHISPALMELLLQEAAEKITDLGEQIVIRHLYIERRMV PLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEIC YMTEVNFRDIPPPRYPEDELASEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLF RADYWRALQNRIREGHVEDVYAYRRRQRFSVRYGEMLF >gi|299856402|gb|ADWV01000049.1| GENE 6 7394 - 8968 307 524 aa, chain - ## HITS:1 COG:arp KEGG:ns NR:ns ## COG: arp COG0666 # Protein_GI_number: 16131843 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Escherichia coli K12 # 1 489 1 501 728 781 81.0 0 MITRIPRSSFSANINNTAQTNEHQTLSELFYKELEDKFSGKELATPLLKSFSENCRQNGR HIFSNKDFVIKFSTSVLQADKKEITIINKNENTTLTQTIAPIFEEYLMEILPQRSDTLDK QELNLKSDRKEKEFPRIKLNGQCYFPGRPQNRIVCRHIAAQYINDIYQNVDYKPHQDDYS SAEKFLTHFNKKCKNQTLALISSRPEGRCVAACGDFGLVMKAYFDKMESNGISVMAAILL VDNHALTARLRIKNTTEGCTHYVVSVYDPNVTNDKIRIMSESKEDIKHYSLMDFMNVDYS LLKWSNDHVINQSVAIIPALPKEQLLMLKGSVDEITPPLSPATMNLLMAIGQNHQLTQLM IQLQKMPELHRTEMLTAYNSGHMNVINTIFNALPTLFNTFKFDKKNMKPLLLANNSNEYP GLFSAIQHKQQNVVETVYLALSDHARLFGFTAEDIMDFWQHKAPQKYSAFELAFELGHRV IAELILNTLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR >gi|299856402|gb|ADWV01000049.1| GENE 7 9285 - 10109 741 274 aa, chain - ## HITS:1 COG:ECs4936 KEGG:ns NR:ns ## COG: ECs4936 COG1414 # Protein_GI_number: 15834190 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 274 14 287 287 526 100.0 1e-149 MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSVALTELAQQAGLPNSTT HRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLLAIVHPILRNLMEESGETV NMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASGAGKAFLAQLSEEQVTKLLHR KGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACIFDEHREPFAAISI SGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR >gi|299856402|gb|ADWV01000049.1| GENE 8 10294 - 13992 4317 1232 aa, chain + ## HITS:1 COG:metH_2 KEGG:ns NR:ns ## COG: metH_2 COG1410 # Protein_GI_number: 16131845 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase I, cobalamin-binding domain # Organism: Escherichia coli K12 # 332 1232 1 901 901 1833 99.0 0 MSGASVSSKVEQLRAQLNERILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDL LVLSKPEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARACA DEWTARTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDQLVAAYRESTKALVEGGA DLILIETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSL RHAEALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMAKQI REWAQAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLPEIPVACRLSGLEPLNIGEDSL FVNVGERTNVTGSAKFKRLIKEEKYSEALDVARQQVENGAQIIDINMDEGMLDAEAAMVR FLNLIAGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLLRR YGAAVVVMAFDEQGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEH NNYAQDFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMG IVNAGQLAIYDDLPAELRDAVEDVILNRRDDGTERLLELAEKYRGSKTDDTANAQQAEWR SWEVNKRLEYSLVKGITEFIEQDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFL PQVVKSARVMKQAVAYLEPFIEASKEQGKTNGKMVIATVKGDVHDIGKNIVGVVLQCNNY EIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGA TTSKAHTAVKIEQNYSGPTVYVQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHG RKKPRTPPVTLEAARDNDFAFDWQAYTPPVAHRLGVQEVEASIETLRNYIDWTPFFMTWS LAGKYPRILEDEVVGVEAQRLFKDANDMLDKLSAEKTLNPRGVVGLFPANRVGDDIEIYR DETRTHVINVSHHLRQQTEKTGFANYCLADFVAPKLSGKADYIGAFAVTGGLEEDALADA FEAQHDDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIRENYQGIRP APGYPACPEHTEKATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQI QRDQVEDYARRKGMSVSDVERWLAPNLGYDAD Prediction of potential genes in microbial genomes Time: Sun May 15 16:01:11 2011 Seq name: gi|299856401|gb|ADWV01000050.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont49.1, whole genome shotgun sequence Length of sequence - 11139 bp Number of predicted genes - 12, with homology - 12 Number of transcription units - 7, operones - 2 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 1/1.000 - CDS 1 - 796 661 ## COG2414 Aldehyde:ferredoxin oxidoreductase 2 2 Op 1 5/1.000 - CDS 908 - 1273 295 ## COG2414 Aldehyde:ferredoxin oxidoreductase 3 2 Op 2 . - CDS 1294 - 1920 362 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 - Term 2331 - 2371 8.2 4 3 Tu 1 . - CDS 2376 - 2585 253 ## LF82_2868 uncharacterized protein YdhZ - Prom 2674 - 2733 8.2 + Prom 2853 - 2912 8.3 5 4 Tu 1 5/1.000 + CDS 3142 - 4554 1564 ## COG0469 Pyruvate kinase + Term 4584 - 4617 4.5 + Prom 4588 - 4647 5.7 6 5 Tu 1 . + CDS 4865 - 5101 324 ## COG4238 Murein lipoprotein + Term 5117 - 5159 11.2 - Term 5111 - 5141 4.3 7 6 Tu 1 4/1.000 - CDS 5165 - 6169 736 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 6248 - 6307 2.8 8 7 Op 1 7/0.000 - CDS 6318 - 6734 548 ## COG2166 SufE protein probably involved in Fe-S center assembly 9 7 Op 2 24/0.000 - CDS 6747 - 7967 1321 ## COG0520 Selenocysteine lyase 10 7 Op 3 41/0.000 - CDS 7964 - 9235 1066 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 11 7 Op 4 41/0.000 - CDS 9210 - 9956 769 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 12 7 Op 5 . - CDS 9966 - 11138 1109 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component Predicted protein(s) >gi|299856401|gb|ADWV01000050.1| GENE 1 1 - 796 661 265 aa, chain - ## HITS:1 COG:ECs2380 KEGG:ns NR:ns ## COG: ECs2380 COG2414 # Protein_GI_number: 15831634 # Func_class: C Energy production and conversion # Function: Aldehyde:ferredoxin oxidoreductase # Organism: Escherichia coli O157:H7 # 1 265 160 424 700 568 99.0 1e-162 MAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRL NDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQ NTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVAN FVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRV LPAEEYAEIRWDQLEAGDVNFIKDF >gi|299856401|gb|ADWV01000050.1| GENE 2 908 - 1273 295 121 aa, chain - ## HITS:1 COG:ydhV KEGG:ns NR:ns ## COG: ydhV COG2414 # Protein_GI_number: 16129629 # Func_class: C Energy production and conversion # Function: Aldehyde:ferredoxin oxidoreductase # Organism: Escherichia coli K12 # 1 121 1 121 700 252 100.0 1e-67 MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVF ATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSP V >gi|299856401|gb|ADWV01000050.1| GENE 3 1294 - 1920 362 208 aa, chain - ## HITS:1 COG:ECs2381 KEGG:ns NR:ns ## COG: ECs2381 COG0437 # Protein_GI_number: 15831635 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 368 100.0 1e-102 MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGV LVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTA DTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKS SKCVLCGECANACPTGALKIIEWKDITV >gi|299856401|gb|ADWV01000050.1| GENE 4 2376 - 2585 253 69 aa, chain - ## HITS:1 COG:no KEGG:LF82_2868 NR:ns ## KEGG: LF82_2868 # Name: ydhZ # Def: uncharacterized protein YdhZ # Organism: E.coli_LF82 # Pathway: not_defined # 1 69 1 69 69 109 100.0 3e-23 MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAM ETVINALVK >gi|299856401|gb|ADWV01000050.1| GENE 5 3142 - 4554 1564 470 aa, chain + ## HITS:1 COG:ECs2383 KEGG:ns NR:ns ## COG: ECs2383 COG0469 # Protein_GI_number: 15831637 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Escherichia coli O157:H7 # 1 470 1 470 470 884 100.0 0 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKT AAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVG NTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIF GCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGI MVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVAN AILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCR GAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLV KEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL >gi|299856401|gb|ADWV01000050.1| GENE 6 4865 - 5101 324 78 aa, chain + ## HITS:1 COG:ECs2384 KEGG:ns NR:ns ## COG: ECs2384 COG4238 # Protein_GI_number: 15831638 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Murein lipoprotein # Organism: Escherichia coli O157:H7 # 1 78 1 78 78 105 100.0 2e-23 MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKD DAARANQRLDNMATKYRK >gi|299856401|gb|ADWV01000050.1| GENE 7 5165 - 6169 736 334 aa, chain - ## HITS:1 COG:ynhG KEGG:ns NR:ns ## COG: ynhG COG1376 # Protein_GI_number: 16129634 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 334 1 334 334 606 99.0 1e-173 MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDT AAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVY PIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYA LRLAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYS VEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPV SVSSGATPAASNAPSVESAQNGEPEQGNMLRATQ >gi|299856401|gb|ADWV01000050.1| GENE 8 6318 - 6734 548 138 aa, chain - ## HITS:1 COG:ynhA KEGG:ns NR:ns ## COG: ynhA COG2166 # Protein_GI_number: 16129635 # Func_class: R General function prediction only # Function: SufE protein probably involved in Fe-S center assembly # Organism: Escherichia coli K12 # 1 126 1 126 138 247 99.0 4e-66 MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRAEDRSPQNSIQGCQSQVWIVMR QNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDVRPWFEKMALTQHLTPSRS QGLEAMIRAIRAKAAALS >gi|299856401|gb|ADWV01000050.1| GENE 9 6747 - 7967 1321 406 aa, chain - ## HITS:1 COG:csdB KEGG:ns NR:ns ## COG: csdB COG0520 # Protein_GI_number: 16129636 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Escherichia coli K12 # 1 406 1 406 406 822 99.0 0 MTFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDSEAEFYRHGYAAVHRGIHT LSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQ MEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPNLFDEKTRLLAITHVSNVLGTE NPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKE ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLN NIAEYEQNLMHYALSQLESVPDLTLYGPRNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRT GHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLLG >gi|299856401|gb|ADWV01000050.1| GENE 10 7964 - 9235 1066 423 aa, chain - ## HITS:1 COG:ECs2388 KEGG:ns NR:ns ## COG: ECs2388 COG0719 # Protein_GI_number: 15831642 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Escherichia coli O157:H7 # 1 423 1 423 423 796 98.0 0 MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTRKHENWKYTPLEGLTNS QFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVSALSDATEGSGYEVSINDDRQGVPDA IQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHLDLAEG AEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPVSHHFAHNDLLLADDAT AFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQL HKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSH GATVGRIDDEQMFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARIGQRLPG GAR >gi|299856401|gb|ADWV01000050.1| GENE 11 9210 - 9956 769 248 aa, chain - ## HITS:1 COG:ECs2389 KEGG:ns NR:ns ## COG: ECs2389 COG0396 # Protein_GI_number: 15831643 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Escherichia coli O157:H7 # 1 248 1 248 248 485 99.0 1e-137 MLSIKDLHVSVEDKAILRGLSLAVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTV EFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDF QDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDA LKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQG YGWLTEQQ >gi|299856401|gb|ADWV01000050.1| GENE 12 9966 - 11138 1109 390 aa, chain - ## HITS:1 COG:ynhE KEGG:ns NR:ns ## COG: ynhE COG0719 # Protein_GI_number: 16129639 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Escherichia coli K12 # 1 390 119 508 508 801 100.0 0 EPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGII FCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYF RINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQ NWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYS VALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQC DSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNG FCKDVFSELPLEFAVEAQKLLAISLEHSVG Prediction of potential genes in microbial genomes Time: Sun May 15 16:01:17 2011 Seq name: gi|299856400|gb|ADWV01000051.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont50.1, whole genome shotgun sequence Length of sequence - 10254 bp Number of predicted genes - 11, with homology - 11 Number of transcription units - 4, operones - 3 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 556 502 ## COG1609 Transcriptional regulators 2 1 Op 2 . - CDS 624 - 1457 865 ## COG1414 Transcriptional regulator - Prom 1550 - 1609 6.1 + Prom 1498 - 1557 5.8 3 2 Op 1 . + CDS 1648 - 3312 1856 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 4 2 Op 2 . + CDS 3314 - 4258 850 ## ECO111_0384 3-(2,3-dihydroxyphenyl)propionate dioxygenase 5 2 Op 3 1/1.000 + CDS 4276 - 5142 980 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 6 2 Op 4 4/0.000 + CDS 5152 - 5961 832 ## COG3971 2-keto-4-pentenoate hydratase 7 2 Op 5 6/0.000 + CDS 5958 - 6908 1011 ## COG4569 Acetaldehyde dehydrogenase (acetylating) 8 2 Op 6 1/1.000 + CDS 6905 - 7918 1196 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases + Term 7984 - 8024 0.1 + Prom 7991 - 8050 7.0 9 3 Tu 1 . + CDS 8193 - 9404 1106 ## COG0477 Permeases of the major facilitator superfamily + Prom 9419 - 9478 3.1 10 4 Op 1 . + CDS 9506 - 10045 646 ## COG3122 Uncharacterized protein conserved in bacteria 11 4 Op 2 . + CDS 10067 - 10231 70 ## SbBS512_E1227 hypothetical protein Predicted protein(s) >gi|299856400|gb|ADWV01000051.1| GENE 1 1 - 556 502 185 aa, chain - ## HITS:1 COG:lacI KEGG:ns NR:ns ## COG: lacI COG1609 # Protein_GI_number: 16128330 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 4 185 1 182 360 323 99.0 2e-88 MVNVKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLA GKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQ RVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVAL GHQQI >gi|299856400|gb|ADWV01000051.1| GENE 2 624 - 1457 865 277 aa, chain - ## HITS:1 COG:ECs0401 KEGG:ns NR:ns ## COG: ECs0401 COG1414 # Protein_GI_number: 15829655 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 277 39 315 315 501 99.0 1e-142 MQNNEQTEYKTVRGLTRGLMLLNMLNKLDGGASVGLLAELSGLHRTTVRRLLETLQEEGY VRRSPSDDSFRLTIKVRQLSEGFRDEQWISALAAPLLGDLLREVVWPTDVSTLDVDAMVV RETTHRFSRLSFHRAMVGRRLPLLKTASGLTWLAFCPEQERKELIEMLAARPGDDYQLAR EPLKLQAILARARKEGYGQNYRGWDQEEKIASIAVPLRSEQRVIGCLNLVYMASAMTIEQ AAEKHLPALQRVAKQIEEGVESQAILVAGRRSGVHLR >gi|299856400|gb|ADWV01000051.1| GENE 3 1648 - 3312 1856 554 aa, chain + ## HITS:1 COG:mhpA KEGG:ns NR:ns ## COG: mhpA COG0654 # Protein_GI_number: 16128332 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Escherichia coli K12 # 1 554 1 554 554 1132 98.0 0 MAIQHPDIQPAVNHSVQVAIAGAGPVGLMMANYLGQMGIDVLVVEKLDKLIDYPRAIGID DEALRTMQSVGLVENVLPHTTPWHAMRFLTPKGRCFADIQPMTDEFGWPRRNAFIQPQVD AVMLEGLSRFPNVRCLFARELEAFSQQNDEVTLHLKTAEGQRETVKAQWLVACDGGASFV RRTLNVPFEGKTAPNQWIVVDIANDPLSTPHIYLCCDPVRPYVSAALPHAVRRFEFMVMP GETEEQLREPQNMRKLLSKVLPNPDNVELIRQRVYTHNARLAQRFRIDRVLLAGDAAHIM PVWQGQGYNSGMRDAFNLAWKLALVIQGKARDALLDTYQQERRDHAKAMIDLSVTAGNVL APPKRWQGTLRDGVSWLLNYLPPVKRYFLEMRFKPMPQYYGGALMREGEAKHSPVGKMFI QPKVTLENGDVTLLDNAIGANFAVIGWGCNPLWGMSDEQIQQWRALGTRFIQVVPEVQIH TAQDNHDGVLRVGDTQGRLRSWFAQHNASLVVMRPDRFVAATAIPQTLGKTLNKLASVMT LTRPDADVSVEKVA >gi|299856400|gb|ADWV01000051.1| GENE 4 3314 - 4258 850 314 aa, chain + ## HITS:1 COG:no KEGG:ECO111_0384 NR:ns ## KEGG: ECO111_0384 # Name: mhpB # Def: 3-(2,3-dihydroxyphenyl)propionate dioxygenase # Organism: E.coli_O111_H- # Pathway: Phenylalanine metabolism [PATH:eoi00360] # 1 314 1 314 314 642 100.0 0 MHAYLHCLSHSPLVGYVDPAQEVLDEVNGVIASARERIAAFSPELVVLFAPDHYNGFFYD VMPPFCLGVGATAIGDFGSAAGELPVPVELAEACAHAVMKSGIDLAVSYCMQVDHGFAQP LEFLLGGLDKVPVLPVFINGVATPLPGFQRTRMLGEAIGRFTSTLNKRVLFLGSGGLSHQ PPVPELAKADAHMRDRLLGSGKDLPASERELRQQRVISAAEKFVEDQRTLHPLNPIWDNQ FMTLLEQGRIQELDAVSNEELSAIAGKSTHEIKTWVAAFAAISTFGNWRSEGRYYRPIPE WIAGFGSLSARTEN >gi|299856400|gb|ADWV01000051.1| GENE 5 4276 - 5142 980 288 aa, chain + ## HITS:1 COG:mhpC KEGG:ns NR:ns ## COG: mhpC COG0596 # Protein_GI_number: 16128334 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Escherichia coli K12 # 1 288 22 309 309 600 99.0 1e-171 MSYQPQTEAATSRFLNVEEAGKTLRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDP LVEAGYRVILLDCPGWGKSDSIVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSS VAFTLNWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFD TSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDR FVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVLNFLARP >gi|299856400|gb|ADWV01000051.1| GENE 6 5152 - 5961 832 269 aa, chain + ## HITS:1 COG:mhpD KEGG:ns NR:ns ## COG: mhpD COG3971 # Protein_GI_number: 16128335 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase # Organism: Escherichia coli K12 # 1 269 3 271 271 533 98.0 1e-151 MTKHTLEQLAADLRRAAEQGEAIAPLRDLIGIDNAEAAYAIQHINVQYDVVQGRRVVGRK VGLTHPKVQQQLGVDQPDFGTLFADMCYGDNEIIPFSRVLQPRIEAEIALVLNRDLPATD ITFDELYNAIEWVLPALEVVGSRIRDWSIQFVDTVADNASCGVYVIGGPAQRPAGLDLKN CAMKMTRNNEEVSSGRGSECLGHPLNAAVWLARKMASLGEPLRAGDIILTGALGPMVAVN AGDRFEAHIEGIGSVAATFSSAAPKGSLS >gi|299856400|gb|ADWV01000051.1| GENE 7 5958 - 6908 1011 316 aa, chain + ## HITS:1 COG:mhpF KEGG:ns NR:ns ## COG: mhpF COG4569 # Protein_GI_number: 16128336 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acetaldehyde dehydrogenase (acetylating) # Organism: Escherichia coli K12 # 1 316 1 316 316 578 100.0 1e-165 MSKRKVAIIGSGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGLARARRMGVATTHEGVI GLMNMPEFADIDIVFDATSAGAHVKNDAALREAKPDIRLIDLTPAAIGPYCVPVVNLEAN VDQLNVNMVTCGGQATIPMVAAVSRVARVHYAEIIASIASKSAGPGTRANIDEFTETTSR AIEVVGGAAKGKAIIVLNPAEPPLMMRDTVYVLSDEASQDDIEASINEMAEAVQAYVPGY RLKQRVQFEVIPQDKPVNLPGVGQFSGLKTAVWLEVEGAAHYLPAYAGNLDIMTSSALAT AEKMAQSLARKAGEAA >gi|299856400|gb|ADWV01000051.1| GENE 8 6905 - 7918 1196 337 aa, chain + ## HITS:1 COG:mhpE KEGG:ns NR:ns ## COG: mhpE COG0119 # Protein_GI_number: 16128337 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Escherichia coli K12 # 1 337 1 337 337 631 100.0 0 MNGKKLYISDVTLRDGMHAIRHQYSLENVRQIAKALDDARVDSIEVAHGDGLQGSSFNYG FGAHSDLEWIEAAADVVKHAKIATLLLPGIGTIHDLKNAWQAGARVVRVATHCTEADVSA QHIQYARELGMDTVGFLMMSHMTTPENLAKQAKLMEGYGATCIYVVDSGGAMNMSDIRDR FRALKAELKPETQTGMHAHHNLSLGVANSIAAVEEGCDRIDASLAGMGAGAGNAPLEVFI AAADKLGWQHGTDLYALMDAADDLVRPLQDRPVRVDRETLALGYAGVYSSFLRHCETAAA RYGLSAVDILVELGKRRMVGGQEDMIVDVALDLRNNK >gi|299856400|gb|ADWV01000051.1| GENE 9 8193 - 9404 1106 403 aa, chain + ## HITS:1 COG:mhpT KEGG:ns NR:ns ## COG: mhpT COG0477 # Protein_GI_number: 16128338 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 13 403 28 418 418 571 99.0 1e-163 MSTRTPSSSSSRLMLTIGLCFLVALMEGLDLQAAGIAAGGIAQAFALDKMQMGWIFSAGI LGLLPGALVGGMLADRYGRKRILIGSVALFGLFSLATAIAWDFPSLVFARLMTGVGLGAA LPNLIALTSEAAGPRFRGTAVSLMYCGVPIGAALAATLGFAGANLAWQTVFWVGGVVPLI LVPLLMRWLPESAVFAGEKQAAPPLRALFAPETATATLLLWLCYFFTLLVVYMLINWLPL LLVEQGFQPSQAAGVMFALQMGAASGTLMLGALMDKLRPVTMSLLIYSGMLASLLALGTV SSFNGMLLAGFVAGLFATGGQSVLYALAPLFYSSQIRATGVGTAVAVGRLGAMSGPLLAG KMLALGTGTVGVMAASAPGILVAGLAVFILMSRRSRMQPCADA >gi|299856400|gb|ADWV01000051.1| GENE 10 9506 - 10045 646 179 aa, chain + ## HITS:1 COG:yaiL KEGG:ns NR:ns ## COG: yaiL COG3122 # Protein_GI_number: 16128339 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 179 40 218 218 295 100.0 4e-80 MAKLTLQEQLLKAGLVTSKKAAKVERTAKKSRVQAREARAAVEENKKAQLERDKQLSEQQ KQAALAKEYKAQVKQLIEMNRITIANGDIGFNFTDGNLIKKIFVDKLTQAQLINGRLAIA RLLVDNNSEGEYAIIPASVADKIAQRDASSIVLHSALSAEEQDEDDPYADFKVPDDLMW >gi|299856400|gb|ADWV01000051.1| GENE 11 10067 - 10231 70 54 aa, chain + ## HITS:1 COG:no KEGG:SbBS512_E1227 NR:ns ## KEGG: SbBS512_E1227 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 11 54 183 226 226 87 95.0 2e-16 MPDATLCASYQALYYPSSAEKIGQFSLPAVRMPYRALGSNLLRRFMQRTAFLPK Prediction of potential genes in microbial genomes Time: Sun May 15 16:01:26 2011 Seq name: gi|299856399|gb|ADWV01000052.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont51.1, whole genome shotgun sequence Length of sequence - 9283 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 8, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 229 340 ## COG3187 Heat shock protein 2 2 Tu 1 . - CDS 226 - 492 193 ## COG3042 Putative hemolysin - Prom 592 - 651 3.0 + Prom 560 - 619 4.7 3 3 Tu 1 2/0.333 + CDS 766 - 4290 3354 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit + Term 4328 - 4359 3.2 + Prom 4464 - 4523 9.2 4 4 Tu 1 1/0.333 + CDS 4657 - 5790 1218 ## COG3203 Outer membrane protein (porin) + Term 5799 - 5829 2.5 + Prom 5850 - 5909 4.2 5 5 Tu 1 . + CDS 5931 - 6365 410 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 6373 - 6404 2.4 + Prom 7204 - 7263 3.8 6 6 Tu 1 . + CDS 7324 - 7557 257 ## ECBD_2095 uncharacterized protein YdfK + Prom 7768 - 7827 4.5 7 7 Tu 1 . + CDS 7874 - 8464 219 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 8648 - 8686 -0.7 8 8 Tu 1 . - CDS 8562 - 9137 395 ## COG5525 Bacteriophage tail assembly protein Predicted protein(s) >gi|299856399|gb|ADWV01000052.1| GENE 1 2 - 229 340 75 aa, chain + ## HITS:1 COG:ECs2001 KEGG:ns NR:ns ## COG: ECs2001 COG3187 # Protein_GI_number: 15831255 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Heat shock protein # Organism: Escherichia coli O157:H7 # 1 75 66 140 140 131 100.0 3e-31 MCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELDNTISEMLKEGAQVDLTANQLTLA TAKQTLTYKLADLMN >gi|299856399|gb|ADWV01000052.1| GENE 2 226 - 492 193 88 aa, chain - ## HITS:1 COG:STM1649 KEGG:ns NR:ns ## COG: STM1649 COG3042 # Protein_GI_number: 16764993 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Salmonella typhimurium LT2 # 38 88 1 51 51 63 92.0 1e-10 MRAAFWVGCAALLLSACSSEPVQQATAAHVAPGLKASMSSSGEANCAMIGGSLSVARQLD GTAIGMCALPNGKRCSEQSLAAGSCGSY >gi|299856399|gb|ADWV01000052.1| GENE 3 766 - 4290 3354 1174 aa, chain + ## HITS:1 COG:ECs2000_1 KEGG:ns NR:ns ## COG: ECs2000_1 COG0674 # Protein_GI_number: 15831254 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Escherichia coli O157:H7 # 1 411 1 411 411 830 99.0 0 MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSE AGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIF GDHSDVMAVRQTGCAMLCAANVQEAQDFALISQIATLKSRVPFIHFFDGFRTSHEINKIV PLADDTILDLMPQVEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYDAVYDHVE QAMNDFSAATGRQYQPFEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRL YRPFSAKHLLQALPGSVRSVAVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRVI GGRYGLSSKEFGPDCVLAVFAELNAAKPKARFTVGIYDDVTNLSLPLPENTLPNSAKLEA LFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYL ISQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSADEVWSRLPQEVQAVLNQKKARF YVINAAKIARECGLAARINTVMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQDLVER NWQALALARESVEEVPLQPVNPHSANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALP PDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPAS LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEE KINYDFFLNLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRML IANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRL LDQFADKIPAELLTALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLI GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRK ARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAL SHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQP EVAEQLWKDAAADLQKRYDFLAQMAGKAEKSNTD >gi|299856399|gb|ADWV01000052.1| GENE 4 4657 - 5790 1218 377 aa, chain + ## HITS:1 COG:ompN KEGG:ns NR:ns ## COG: ompN COG3203 # Protein_GI_number: 16129338 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Escherichia coli K12 # 1 377 1 377 377 619 99.0 1e-177 MKSKVLALLIPALLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYFSDNSAKDGDQSYARLG FKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGLKFADYGSFDYGRNYGVMY DIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFFGLVNGLNFAVQYQGNNEGAS NGQEGTNNGRDVRHENGDGWGLSTTYDLGMGFSAGAAYTSSDRTNDQVNHTAAGGDKADA WTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVANKTQNFEVTAQYQFDFGLRPAVSFL MSKGRDLHAAGGADNPAGVDDKDLVKYADVGATYYFNKNMSTYVDYKINLLDEDDSFYAA NGISTDDIVALGLVYQF >gi|299856399|gb|ADWV01000052.1| GENE 5 5931 - 6365 410 144 aa, chain + ## HITS:1 COG:ECs1997 KEGG:ns NR:ns ## COG: ECs1997 COG0589 # Protein_GI_number: 15831251 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Escherichia coli O157:H7 # 1 144 25 168 168 258 99.0 2e-69 MNRTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPA MDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILEMAKKIPAHMIIIASHRPDI TTYLLGSNAAAVVRHAECSVLVVR >gi|299856399|gb|ADWV01000052.1| GENE 6 7324 - 7557 257 77 aa, chain + ## HITS:1 COG:no KEGG:ECBD_2095 NR:ns ## KEGG: ECBD_2095 # Name: not_defined # Def: uncharacterized protein YdfK # Organism: E.coli_BL21_DE3 # Pathway: not_defined # 1 77 1 77 77 136 98.0 3e-31 MKSKDTLKWFPAQLPEVRIILGNAVVEVAKQGRPINTRTLLDYIEGNIKKKSWLDNKELL QTAISVLKDNQNLNGKM >gi|299856399|gb|ADWV01000052.1| GENE 7 7874 - 8464 219 196 aa, chain + ## HITS:1 COG:pinR KEGG:ns NR:ns ## COG: pinR COG1961 # Protein_GI_number: 16129335 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Escherichia coli K12 # 1 196 1 196 196 357 99.0 7e-99 MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARL KCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALAGIDLTSPTGKMMMQVISAV AEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTS RQTILRAKAKLQTPDI >gi|299856399|gb|ADWV01000052.1| GENE 8 8562 - 9137 395 191 aa, chain - ## HITS:1 COG:ybcX KEGG:ns NR:ns ## COG: ybcX COG5525 # Protein_GI_number: 16128544 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Escherichia coli K12 # 50 191 103 244 247 262 92.0 3e-70 MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNS DEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPGGEYQKWNGTAWVKDTEA EKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTS TAQDIEWPALP Prediction of potential genes in microbial genomes Time: Sun May 15 16:01:32 2011 Seq name: gi|299856398|gb|ADWV01000053.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont52.1, whole genome shotgun sequence Length of sequence - 9219 bp Number of predicted genes - 13, with homology - 13 Number of transcription units - 7, operones - 4 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 12/0.000 + CDS 1 - 369 412 ## COG1140 Nitrate reductase beta subunit 2 1 Op 2 12/0.000 + CDS 369 - 1064 868 ## COG2180 Nitrate reductase delta subunit 3 1 Op 3 4/0.333 + CDS 1061 - 1741 510 ## COG2181 Nitrate reductase gamma subunit 4 1 Op 4 . + CDS 1821 - 2714 882 ## COG0384 Predicted epimerase, PhzC/PhzF homolog 5 2 Tu 1 . - CDS 2810 - 3655 655 ## COG2162 Arylamine N-acetyltransferase - Prom 3769 - 3828 3.3 + Prom 3718 - 3777 2.8 6 3 Tu 1 . + CDS 3828 - 4397 426 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family + Term 4561 - 4587 -1.0 7 4 Op 1 2/1.000 - CDS 4401 - 4628 235 ## COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 8 4 Op 2 2/1.000 - CDS 4661 - 5050 276 ## COG5433 Transposase - Prom 5092 - 5151 3.0 9 5 Tu 1 . - CDS 5578 - 5832 207 ## COG5433 Transposase - Prom 5852 - 5911 7.9 10 6 Op 1 . - CDS 6058 - 6627 65 ## JW0693 hypothetical protein 11 6 Op 2 . - CDS 6624 - 8057 716 ## COG3209 Rhs family protein 12 7 Op 1 . - CDS 8175 - 8432 120 ## B21_00650 hypothetical protein 13 7 Op 2 . - CDS 8501 - 9217 106 ## COG3209 Rhs family protein Predicted protein(s) >gi|299856398|gb|ADWV01000053.1| GENE 1 1 - 369 412 122 aa, chain + ## HITS:1 COG:narY KEGG:ns NR:ns ## COG: narY COG1140 # Protein_GI_number: 16129426 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Escherichia coli K12 # 1 122 393 514 514 262 100.0 1e-70 MLSAGDTGPVLRALKRMMAMRHYMRSQTVEGVTDTRAIDEVGLSVAQVEEMYRYLAIANY EDRFVIPTSHREMAGDAFAERNGCGFTFGDGCHGSDSKFNLFNSSRIDAINITEVRDKAE GE >gi|299856398|gb|ADWV01000053.1| GENE 2 369 - 1064 868 231 aa, chain + ## HITS:1 COG:narW KEGG:ns NR:ns ## COG: narW COG2180 # Protein_GI_number: 16129425 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Escherichia coli K12 # 1 231 1 231 231 441 99.0 1e-124 MQILKVIGLLMEYPDELLWECKEDALALIRRDAPMLTDFTHNLLNAPLLDKQAEWCEVFD RGRTTSLLLFEHVHAESRDRGQAMVDLLAEYEKVGLQLDCRELPDYLPLYLEYLSVLPDD QAKEGLLNVAPILALLGGRLKQREAPWYALFDALLQLAGSILSSDSVTKQVNSEERDDTR QALDAVWEEEQVKFIEDNATACDSSPLNHYQRRFSQDVAPQYVDISAGGGK >gi|299856398|gb|ADWV01000053.1| GENE 3 1061 - 1741 510 226 aa, chain + ## HITS:1 COG:ECs2068 KEGG:ns NR:ns ## COG: ECs2068 COG2181 # Protein_GI_number: 15831322 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Escherichia coli O157:H7 # 1 226 1 226 226 420 100.0 1e-117 MIQYLNVFFYDIYPYICATVFFLGSWLRYDYGQYTWRASSSQMLDKRGMVIWSNLFHIGI LGIFFGHLFGMLTPHWMYAWFLPVAAKQLMAMVLGGICGVLTLIGGAGLLWRRLTNQRVR ATSTTPDIIIMSILLIQCLLGLSTIPFSAQYPDGSEMMKLVGWAQSIVTFRGGSSEMLNG VAFVFRLHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRSRR >gi|299856398|gb|ADWV01000053.1| GENE 4 1821 - 2714 882 297 aa, chain + ## HITS:1 COG:yddE KEGG:ns NR:ns ## COG: yddE COG0384 # Protein_GI_number: 16129423 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Escherichia coli K12 # 1 297 1 297 297 593 97.0 1e-169 MKPQVYHVDAFTSQPFRGNSAGVVFPADNLSEAQMQLIARELGHSETAFLLHNDDSDVRI RYFTPTVEVPICGHATVAAHYVRAKVLGLGNCTIWQTSLAGKHRVTIEKHNDDYRISLEQ GTPGFEPPLEGETREAIINALHLTEDDILPGLPIQVATTGHSKVMIPLKPEVDIDALSPD LAALSAISKQIGCNGFFPFQIRPGKNETDGRMFSPAIGIVEDPVTGNANGPMGAWLVHHN VLPHDGKVLRVKGHQGRALGRDGVIEVTVTIRDNQPEKVTISGTAVILFHAEWAIEI >gi|299856398|gb|ADWV01000053.1| GENE 5 2810 - 3655 655 281 aa, chain - ## HITS:1 COG:nhoA KEGG:ns NR:ns ## COG: nhoA COG2162 # Protein_GI_number: 16129422 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Arylamine N-acetyltransferase # Organism: Escherichia coli K12 # 1 281 1 281 281 555 98.0 1e-158 MTPILNHYFARINWSGAAAVNIDTLRALHLKHNCTIPFENLDVLLPREIQLDDQSLEEKL VIARRGGYCFEQNGVFERVLRELEFNVRSLLGRVVLSNPPALPPRTHRLLLVELEEEKWI ADVGFGGQTLTAPIRLVSDLVQTTPHGEYRLLQEGDDWVLQFNHHQHWQSMYRFDLCEQQ QSDYVMGNFWSAHWPQSHFRHHLLMCRHLPDGGKLTLTNFHFTHYENGHAVEQRNLPDVV SLYAVMQEQFGLGVDDAKHGFTVDELALVMAAFDTHPEAGK >gi|299856398|gb|ADWV01000053.1| GENE 6 3828 - 4397 426 189 aa, chain + ## HITS:1 COG:yddH KEGG:ns NR:ns ## COG: yddH COG1853 # Protein_GI_number: 16129421 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli K12 # 1 189 17 205 205 383 96.0 1e-106 MSRFIPIELHHASRLLNHGPTVMITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKST WTRELIERNGKFGIVIPGVAATNWTWAVGSVSGREEDKFNCYGIPVVKGPVLGLPLVEEK CLAWMECRLLPATSAQQKYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFV TSGKRVTAG >gi|299856398|gb|ADWV01000053.1| GENE 7 4401 - 4628 235 75 aa, chain - ## HITS:1 COG:ZydcE KEGG:ns NR:ns ## COG: ZydcE COG1942 # Protein_GI_number: 15801678 # Func_class: R General function prediction only # Function: Uncharacterized protein, 4-oxalocrotonate tautomerase homolog # Organism: Escherichia coli O157:H7 EDL933 # 1 75 14 88 88 133 100.0 7e-32 MPHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEI APQMEALIKKPGYSM >gi|299856398|gb|ADWV01000053.1| GENE 8 4661 - 5050 276 129 aa, chain - ## HITS:1 COG:ybfL KEGG:ns NR:ns ## COG: ybfL COG5433 # Protein_GI_number: 16128680 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 124 42 165 285 247 95.0 5e-66 MHSLVIGQIKTDDKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFA VKGNQGWLNKAFEEKFPLKELNNPEHDSYAICEKSHGREEIRIHIVCDVPDELIDFTFEW KGLKIHNVC >gi|299856398|gb|ADWV01000053.1| GENE 9 5578 - 5832 207 84 aa, chain - ## HITS:1 COG:yhhI KEGG:ns NR:ns ## COG: yhhI COG5433 # Protein_GI_number: 16131356 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Escherichia coli K12 # 1 79 1 79 378 160 96.0 6e-40 MELKKLMEHISITPDYRQAWKVVHKLSDILLLTICAVISGAEGWEDIEDFGETHLDFLKQ YGDFENGIPVHDTIARVVSQGKIT >gi|299856398|gb|ADWV01000053.1| GENE 10 6058 - 6627 65 189 aa, chain - ## HITS:1 COG:no KEGG:JW0693 NR:ns ## KEGG: JW0693 # Name: ybfC # Def: hypothetical protein # Organism: E.coli_J # Pathway: not_defined # 1 189 1 189 189 394 100.0 1e-109 MKRVLFFLLMIFVSFGVIADCEIQAKDHDCFTIFAKGTIFSAFPVLNNKAMWRWYQNEDI GEYYWQTELGTCKNNKFTPSGARLLIRVGSLRLNENHAIKGTLQELINTAEKTAFLGDRF RSYIRAGIYQKKSSDPVQLLAVLDNSIMVKYFKDEKPTYARMTAHLPNKNESYECLIKIQ HELIRSEEK >gi|299856398|gb|ADWV01000053.1| GENE 11 6624 - 8057 716 477 aa, chain - ## HITS:1 COG:ECs0729 KEGG:ns NR:ns ## COG: ECs0729 COG3209 # Protein_GI_number: 15829983 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 # 1 477 923 1399 1399 947 97.0 0 MWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQ YAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRS RIQTIYQPGSFTPLIRVETATGEQAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRL ESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALVSTEG ATEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDP IGLKGGWNFYQYPLNPVQYIDSMGLASKYGHLNNGGYGARPNKPPTPDPSKLPDIAKQLR LPYPIDQASSAPNVFKTFFRALSPYDYTLYCRKWVKPNLTCTPQDDSQYPGMDTKTASDY LPQTNWPTTQLPPGYTCAEPYLFPDINKPDGPATAGIDDLGEILAKMKQRTSRGIRK >gi|299856398|gb|ADWV01000053.1| GENE 12 8175 - 8432 120 85 aa, chain - ## HITS:1 COG:no KEGG:B21_00650 NR:ns ## KEGG: B21_00650 # Name: ybfB # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 85 24 108 108 124 100.0 7e-28 MHRLSLLDSTRDVSELISLMSYGMMVICFPTGIVFFIALIFIGTVSDIIGVRIDSKYIMA IIIWLYFLSGGYIQWFVLSKRIINK >gi|299856398|gb|ADWV01000053.1| GENE 13 8501 - 9217 106 238 aa, chain - ## HITS:1 COG:ZrhsC KEGG:ns NR:ns ## COG: ZrhsC COG3209 # Protein_GI_number: 15800401 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli O157:H7 EDL933 # 2 238 1161 1397 1397 513 98.0 1e-145 RKGRTAWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYIT QDPIGLKGGWNFYQYPLNPISNIDPLGLETLKCIKPLHSMGGTGERSGPDIWGNPFYHQY LCVPDGKGDYTCGGQDQRGESKGDGLWGPGKASNDTKEAAGRCDLVETDNSCVENCLKGK FKEVRPRYSVLPDIFTPINLGLFKNCQDWSNDSLETCKMKCSGNNIGRFIRFVFTGVM Prediction of potential genes in microbial genomes Time: Sun May 15 16:01:40 2011 Seq name: gi|299856397|gb|ADWV01000054.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont53.1, whole genome shotgun sequence Length of sequence - 7822 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 4, operones - 3 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 284 - 859 556 ## COG0241 Histidinol phosphatase and related phosphatases - Prom 1026 - 1085 3.9 2 2 Op 1 32/0.000 + CDS 1047 - 2078 1147 ## COG1135 ABC-type metal ion transport system, ATPase component 3 2 Op 2 22/0.000 + CDS 2071 - 2724 868 ## COG2011 ABC-type metal ion transport system, permease component 4 2 Op 3 . + CDS 2764 - 3579 1206 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 3614 - 3650 6.7 + Prom 3613 - 3672 2.5 5 3 Op 1 . + CDS 3697 - 4122 376 ## EC55989_0194 outer membrane lipoprotein 6 3 Op 2 6/1.000 + CDS 4119 - 4826 649 ## COG1720 Uncharacterized conserved protein + Term 4890 - 4920 2.7 7 4 Op 1 . + CDS 4938 - 6656 2246 ## COG0442 Prolyl-tRNA synthetase + Term 6662 - 6702 9.0 8 4 Op 2 . + CDS 6710 - 7291 158 ## ECSE_0195 hypothetical protein 9 4 Op 3 . + CDS 7297 - 7533 185 ## SDY_0212 hypothetical protein + Term 7695 - 7725 3.0 Predicted protein(s) >gi|299856397|gb|ADWV01000054.1| GENE 1 284 - 859 556 191 aa, chain - ## HITS:1 COG:ECs0202 KEGG:ns NR:ns ## COG: ECs0202 COG0241 # Protein_GI_number: 15829456 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Escherichia coli O157:H7 # 1 191 1 191 191 395 100.0 1e-110 MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIAR GKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSA RDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLP QAIKKQQKPAQ >gi|299856397|gb|ADWV01000054.1| GENE 2 1047 - 2078 1147 343 aa, chain + ## HITS:1 COG:ECs0201 KEGG:ns NR:ns ## COG: ECs0201 COG1135 # Protein_GI_number: 15829455 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Escherichia coli O157:H7 # 1 343 1 343 343 677 100.0 0 MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEG SVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRR VTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSIL ELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKF IQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQ MDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEVLGYV >gi|299856397|gb|ADWV01000054.1| GENE 3 2071 - 2724 868 217 aa, chain + ## HITS:1 COG:yaeE KEGG:ns NR:ns ## COG: yaeE COG2011 # Protein_GI_number: 16128191 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Escherichia coli K12 # 1 217 1 217 217 310 100.0 9e-85 MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIV NIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLI EASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYG YIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK >gi|299856397|gb|ADWV01000054.1| GENE 4 2764 - 3579 1206 271 aa, chain + ## HITS:1 COG:yaeC KEGG:ns NR:ns ## COG: yaeC COG1464 # Protein_GI_number: 16128190 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli K12 # 1 271 1 271 271 505 99.0 1e-143 MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQVAEVAQKVAKDKYGLD VELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYKLVAVGNTFVYPIAGYSKK IKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDGVGLLPTVLDVVENPKNLKIV ELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIFVEDKDSPYVNLIVTREDNKDA ENVKKFVQAYQSDEVYEAANKVFNGGAVKGW >gi|299856397|gb|ADWV01000054.1| GENE 5 3697 - 4122 376 141 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0194 NR:ns ## KEGG: EC55989_0194 # Name: rcsF # Def: outer membrane lipoprotein # Organism: E.coli_55989 # Pathway: Two-component system [PATH:eck02020] # 1 141 1 134 134 209 95.0 2e-53 MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAEPAKPKAPRATPVRIYT NAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTS GTPGCYRQAVCIGSALNITAK >gi|299856397|gb|ADWV01000054.1| GENE 6 4119 - 4826 649 235 aa, chain + ## HITS:1 COG:yaeB KEGG:ns NR:ns ## COG: yaeB COG1720 # Protein_GI_number: 16128188 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 235 1 235 235 467 99.0 1e-132 MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWIL FVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILK LGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVSFTAEVEKQLLTLEKRY PQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVADAGFEVFALEPR >gi|299856397|gb|ADWV01000054.1| GENE 7 4938 - 6656 2246 572 aa, chain + ## HITS:1 COG:ECs0196 KEGG:ns NR:ns ## COG: ECs0196 COG0442 # Protein_GI_number: 15829450 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Escherichia coli O157:H7 # 1 572 1 572 572 1135 99.0 0 MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREE MNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRN ELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAA YSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIA PKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKAVEGSSFPLVALLVRG DHELNEVKAEKLPQVASPLTFATEEEIRAVVKAGPGSLGPVNMPIPVVIDRTVAAMSDFA AGANIDGKHYFGINWDRDVATPEVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTK YSEALKASVQGEDGRNQILTMGCYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILP MNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLD NDDIEYKYRRNGEKQLIKTGDIVEYLVKQIKG >gi|299856397|gb|ADWV01000054.1| GENE 8 6710 - 7291 158 193 aa, chain + ## HITS:1 COG:no KEGG:ECSE_0195 NR:ns ## KEGG: ECSE_0195 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 193 1 193 193 348 100.0 4e-95 MDKPKAYCRLFLPSFLLLSACTVDISQPDPSATAVDAEAKTWAVKFQHQSSFTEQSIKEI TAPDLKPGDLLFSSSLGVTSFGIRVFSTSSVSHVAIFLGDNNVAEATGAGVQIVSLKKAM KHSDKLFVLRVPDLTPQQATDITAFANKIKDSGYNYRGIVEFIPFMVTRQMCSLNPFSED FRQSASAAWRKRS >gi|299856397|gb|ADWV01000054.1| GENE 9 7297 - 7533 185 78 aa, chain + ## HITS:1 COG:no KEGG:SDY_0212 NR:ns ## KEGG: SDY_0212 # Name: yaeF # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 78 197 274 274 167 98.0 1e-40 MGEGDKKSWFCSEFVTDAFAKAGHPLTLAQSGWISPADLMHMRIGDVSAFKPETQLQYVG HLKPGIYIKAGRFVGLTQ Prediction of potential genes in microbial genomes Time: Sun May 15 16:01:49 2011 Seq name: gi|299856396|gb|ADWV01000055.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont54.1, whole genome shotgun sequence Length of sequence - 6896 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 6, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 212 - 249 1.4 1 1 Tu 1 . - CDS 313 - 657 284 ## COG3272 Uncharacterized conserved protein - Prom 690 - 749 2.6 + Prom 1256 - 1315 7.6 2 2 Tu 1 . + CDS 1465 - 1989 373 ## COG3040 Bacterial lipocalin - Term 2012 - 2045 2.1 3 3 Op 1 . - CDS 2145 - 2522 349 ## B21_01522 hypothetical protein 4 3 Op 2 . - CDS 2540 - 3517 501 ## LF82_2839 uncharacterized protein YdfU - Term 3792 - 3829 0.7 5 4 Tu 1 . - CDS 3936 - 4187 198 ## SDY_1433 hypothetical protein - Prom 4259 - 4318 7.5 - Term 4308 - 4333 -0.5 6 5 Tu 1 . - CDS 4404 - 4616 155 ## ECO103_1375 regulatory protein for HokC - Prom 4727 - 4786 5.2 + Prom 5212 - 5271 7.9 7 6 Op 1 . + CDS 5302 - 5997 117 ## EC55989_1371 hypothetical protein 8 6 Op 2 . + CDS 6070 - 6663 184 ## COG0500 SAM-dependent methyltransferases + Term 6671 - 6713 1.5 Predicted protein(s) >gi|299856396|gb|ADWV01000055.1| GENE 1 313 - 657 284 114 aa, chain - ## HITS:1 COG:STM1389_2 KEGG:ns NR:ns ## COG: STM1389_2 COG3272 # Protein_GI_number: 16764739 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 113 45 157 158 159 69.0 1e-39 MGPFVAAIHEWADLESYFEVYRDNLMAILRKPASRKNHTNVLMHIQGYFSNYLSTRQRKE LSEVILNYRFGTLPLLAPLTLLKHYLGEYPNDYLLTQNYFDPYPEELALRLMVN >gi|299856396|gb|ADWV01000055.1| GENE 2 1465 - 1989 373 174 aa, chain + ## HITS:1 COG:STM4339 KEGG:ns NR:ns ## COG: STM4339 COG3040 # Protein_GI_number: 16767588 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Bacterial lipocalin # Organism: Salmonella typhimurium LT2 # 1 174 1 174 177 236 60.0 2e-62 MKLWPVLTGIALSFTFIACKAPTPPKGVQPITNFDANRYLGKWYEIARLENWFERGLEQV SATYEKRNDGGIRVLNRGYDPTKNKWSESEGKAYFTGDTKTAALKVSFFGPFYGGYNVIK LDDEYKYALVSGPNREYLWILARTQTIPDNVKADYVRTAQKLGFNVNELLWVKQ >gi|299856396|gb|ADWV01000055.1| GENE 3 2145 - 2522 349 125 aa, chain - ## HITS:1 COG:no KEGG:B21_01522 NR:ns ## KEGG: B21_01522 # Name: ybl76 # Def: hypothetical protein # Organism: E.coli_BL21 # Pathway: not_defined # 1 125 1 125 125 242 98.0 3e-63 MRDIQMVLERWGAWAAYNHEDVTWSSIAAGFKGLIPSKVRSRPQCCDDDVMIICECMARL KKNNSDLHDLLVDYYVGGMTFMALARKHGRSDCWVGRMLQKAEGVVEGMLMVLDLRLEMD ADCSK >gi|299856396|gb|ADWV01000055.1| GENE 4 2540 - 3517 501 325 aa, chain - ## HITS:1 COG:no KEGG:LF82_2839 NR:ns ## KEGG: LF82_2839 # Name: ydfU # Def: uncharacterized protein YdfU # Organism: E.coli_LF82 # Pathway: not_defined # 11 325 1 315 315 630 97.0 1e-179 MPVFHNTRVLVEPEPKSMRNLPSGVVPAVRQPLVEDKTLLPFFSNARVIRAAGGAGALSD WLLRHIKSCQWPHGDYHHSETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQLAHQNLSAW MIDVIGHAISGTQERELSLAELSWWAVRNQVADALPEAVLRRSLGLPAEKNCSVYRESDI VPGEQTATSILKQRTKNLAPLPHAHQQQNPSQEKTVVSITVDPESPESFMKLPKRHRWVK EKYTRWVKTQPCACCGMPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHDELHTDTVAF EEKYGSQLELIFRFIDRALAIGVLA >gi|299856396|gb|ADWV01000055.1| GENE 5 3936 - 4187 198 83 aa, chain - ## HITS:1 COG:no KEGG:SDY_1433 NR:ns ## KEGG: SDY_1433 # Name: rem # Def: hypothetical protein # Organism: S.dysenteriae # Pathway: not_defined # 1 83 1 83 83 159 100.0 2e-38 MMNIEELRKIFCEDGLYAVCVENGNIVSHYRIVCLQKNGAALINFVDARVTDGFILRDGE FVTSLQALKEIGIKAGFSAFSEE >gi|299856396|gb|ADWV01000055.1| GENE 6 4404 - 4616 155 70 aa, chain - ## HITS:1 COG:no KEGG:ECO103_1375 NR:ns ## KEGG: ECO103_1375 # Name: not_defined # Def: regulatory protein for HokC # Organism: E.coli_O103_H2 # Pathway: not_defined # 1 70 1 70 70 107 98.0 9e-23 MLYTRRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRIGQTEV AVFTAYEPEE >gi|299856396|gb|ADWV01000055.1| GENE 7 5302 - 5997 117 231 aa, chain + ## HITS:1 COG:no KEGG:EC55989_1371 NR:ns ## KEGG: EC55989_1371 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 231 5 235 235 416 100.0 1e-115 MLEPPKSYNEMLPMLHKATFITTFIFYLSLVIYGYMPLVGINAKYIPPVKDYEEFIKWIL TFGILPIASSVFWSVISGALDLHNNVAKIIGIRKMWDSHLIIKPLAKIAGVTRKLTTDES HKVMSKLYYPEVKELKDKHYVELFWNKVYYFWVFFEHTVIAFVTILIISIAKLTNIFSVT GSLINLWLWIISLVAFDFLIFIASVKPRTESQVRQIPDSKIKEFFNNNNIF >gi|299856396|gb|ADWV01000055.1| GENE 8 6070 - 6663 184 197 aa, chain + ## HITS:1 COG:ymfD KEGG:ns NR:ns ## COG: ymfD COG0500 # Protein_GI_number: 16129100 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 1 192 25 216 221 262 67.0 3e-70 MPSNYLCKQIESTNKNGNALDFGCGKLRYSEQLVNKFETVTFLDSRRQLERVQIIRGVQT TIPDYVINNYKNANIVSYENIDKITNHYDFILCANVLSAIPCESTIHKVLSAIRELLKSD GEALIVNQYKSSYFKRYESGIKHLHGYIYQNSRNAFYYGLLDVDTVSKICSDNNLEIIKS WSKAGSSYVVVGKHIHI Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:05 2011 Seq name: gi|299856395|gb|ADWV01000056.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont55.1, whole genome shotgun sequence Length of sequence - 5761 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 6, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 12 - 143 81 ## KPN_pKPN5p08195 putative transposase + Prom 175 - 234 3.6 2 2 Op 1 . + CDS 265 - 1170 492 ## COG3173 Predicted aminoglycoside phosphotransferase + Term 1189 - 1224 0.2 3 2 Op 2 11/0.000 + CDS 1239 - 2405 629 ## COG0477 Permeases of the major facilitator superfamily 4 2 Op 3 . + CDS 2405 - 2989 335 ## COG1309 Transcriptional regulator 5 3 Tu 1 . - CDS 3482 - 4246 383 ## COG3316 Transposase and inactivated derivatives - Prom 4424 - 4483 2.0 6 4 Tu 1 . + CDS 4473 - 4709 129 ## gi|297622247|ref|YP_003675799.1| hypothetical protein pKOX105p69 7 5 Tu 1 . - CDS 4876 - 5358 176 ## COG0262 Dihydrofolate reductase - Prom 5582 - 5641 4.5 + Prom 5423 - 5482 2.9 8 6 Tu 1 . + CDS 5502 - 5760 154 ## COG0582 Integrase Predicted protein(s) >gi|299856395|gb|ADWV01000056.1| GENE 1 12 - 143 81 43 aa, chain + ## HITS:1 COG:no KEGG:KPN_pKPN5p08195 NR:ns ## KEGG: KPN_pKPN5p08195 # Name: not_defined # Def: putative transposase # Organism: K.pneumoniae # Pathway: not_defined # 1 43 196 238 238 87 100.0 1e-16 MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM >gi|299856395|gb|ADWV01000056.1| GENE 2 265 - 1170 492 301 aa, chain + ## HITS:1 COG:BH0381 KEGG:ns NR:ns ## COG: BH0381 COG3173 # Protein_GI_number: 15612944 # Func_class: R General function prediction only # Function: Predicted aminoglycoside phosphotransferase # Organism: Bacillus halodurans # 11 301 7 300 300 207 38.0 2e-53 MTVVTTADTSQLYALAARHGLKLHGPLTVNELGLDYRIVIATVDDGRRWVLRIPRRAEVS AKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTAMVIQPGSSTPDWVVPQDS EVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDRVRREFVVNDKRLHRW QRWLDDDSSWPDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVFG EEGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYALFALDSGNEEYLAAAKAQLAAA E >gi|299856395|gb|ADWV01000056.1| GENE 3 1239 - 2405 629 388 aa, chain + ## HITS:1 COG:MT1297 KEGG:ns NR:ns ## COG: MT1297 COG0477 # Protein_GI_number: 15840704 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis CDC1551 # 1 381 25 414 419 106 30.0 8e-23 MAALALPWFVLSHTKSAAWAGATAASSVIATIIGAWVGGGLVDRFGRAPVALISGVVGGV AMASIPLLDAVGALSNTGLIACVVLGAAFDAPGMAAQDSELPKLGHVAGLSVERVSSLNA VIGNVAILGGPALGGAAIGLLGAAPTLGLTAFCSVLAGLLGAWVLPARAARTMTTTATLS MRAGVAFLWSEPLLRPLFGIVMIFVGIVGANGSVIMPALFVDAGRQVAELGLFSSMMGAG GLLGIAIHASVGARISAQNWLAVAFCGSAVGSLLLSQLPGVPVLMLLGALVGLLTGSVSP ILNAAIYNRTPPELLGRVLGTVSAVMLSASPMVMLAAGAFVDLAGPLPGLVVSAVFAGLV ALLSLRLQFATMAAAATASAPTHTEGEH >gi|299856395|gb|ADWV01000056.1| GENE 4 2405 - 2989 335 194 aa, chain + ## HITS:1 COG:mlr3373 KEGG:ns NR:ns ## COG: mlr3373 COG1309 # Protein_GI_number: 13472924 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 1 169 11 183 202 65 30.0 6e-11 MPRPKLKSDDEVLEAATVVLKRCGPIEFTLSGVAKEVGLSRAALIQRFTNRDTLLVRMME RGVEQVRHYLNAIPIGAGPQGLWEFLQVLVRSMNTRNDFSVNYLISWYELQVPELRTLAI QRNRAVVEGIRKRLPPGAPAAAELLLHSVIAGATMQWAVDPDGELADHVLAQIAAILCLM FPEHDDFQLLQAHA >gi|299856395|gb|ADWV01000056.1| GENE 5 3482 - 4246 383 254 aa, chain - ## HITS:1 COG:Cgl0933 KEGG:ns NR:ns ## COG: Cgl0933 COG3316 # Protein_GI_number: 19552183 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 212 1 214 236 239 57.0 3e-63 MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRWVQCYAPEMEK RLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDTIDFYLSPTRSAKAAKRFLGK ALRGLKHWEKPATLNTDKAPSYGAAITELKREGKLDRETAHRQVKYLNNVIEADHGKLKI LIKPVRGFKSIPTAYATIKGFEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALT EAMGMLNHHFAAAA >gi|299856395|gb|ADWV01000056.1| GENE 6 4473 - 4709 129 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|297622247|ref|YP_003675799.1| ## NR: gi|297622247|ref|YP_003675799.1| hypothetical protein pKOX105p69 [Klebsiella oxytoca KOX105] # 1 78 81 158 158 150 100.0 2e-35 MVQMLVDPFGQFFDGLLLELVTFPELDVQGPGHLVEVPADSSKLPARFPYGVHFFISEDR HPVQRPQSFLYLNSPANM >gi|299856395|gb|ADWV01000056.1| GENE 7 4876 - 5358 176 160 aa, chain - ## HITS:1 COG:AGc3708 KEGG:ns NR:ns ## COG: AGc3708 COG0262 # Protein_GI_number: 15889333 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 144 1 151 175 93 37.0 1e-19 MRTLKVSLMAAKAKNGVIGCGPDIPWSAKGEQLLFKALTYNQWLLVGRKTFESMGALPNR KYAVVTRSGWTSNDDNVVVFQSIEEAMDRLAEFTGHVIVSGGGEIYRETLPMASTLHLST IDIEPEGDVFFPSIPNTFEVVFEQHFTSNINYCYQIWKKG >gi|299856395|gb|ADWV01000056.1| GENE 8 5502 - 5760 154 86 aa, chain + ## HITS:1 COG:VCA0291 KEGG:ns NR:ns ## COG: VCA0291 COG0582 # Protein_GI_number: 15601056 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Vibrio cholerae # 15 86 4 75 320 58 38.0 3e-09 MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGVRHPATLGSSE VEAFLSWLANERKVSVSTHRQALAAL Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:14 2011 Seq name: gi|299856394|gb|ADWV01000057.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont56.1, whole genome shotgun sequence Length of sequence - 5434 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 4, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 79 - 119 6.6 1 1 Tu 1 . - CDS 124 - 1173 1015 ## COG0616 Periplasmic serine proteases (ClpP class) - Prom 1203 - 1262 3.6 + Prom 1282 - 1341 2.1 2 2 Op 1 5/0.500 + CDS 1393 - 2151 719 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 3 2 Op 2 . + CDS 2148 - 2738 675 ## COG2109 ATP:corrinoid adenosyltransferase + Term 2749 - 2782 2.5 - Term 2737 - 2769 1.5 4 3 Tu 1 4/1.000 - CDS 2778 - 3650 1223 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Term 3688 - 3717 1.2 5 4 Op 1 6/0.500 - CDS 3751 - 4371 780 ## COG0009 Putative translation factor (SUA5) 6 4 Op 2 . - CDS 4368 - 5249 393 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) - Prom 5328 - 5387 5.8 Predicted protein(s) >gi|299856394|gb|ADWV01000057.1| GENE 1 124 - 1173 1015 349 aa, chain - ## HITS:1 COG:sohB KEGG:ns NR:ns ## COG: sohB COG0616 # Protein_GI_number: 16129233 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Escherichia coli K12 # 1 349 1 349 349 594 100.0 1e-169 MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRVNNLSEQYKEMKEELAA ALMDSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSKPRVWVLDFKGSMDAHEVNSL REEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQRLRDKNIPLTVTVDKVAASGG YMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKDIDIELHTAGQYKRTLTLLGENT EEGREKFREELNETHQLFKDFVKRMRPSLDIEQVATGEHWYGQQAVEKGLVDEINTSDEV ILSLMEGREVVNVRYMQRKRLIDRFTGSAAESADRLLLRWWQRGQKPLM >gi|299856394|gb|ADWV01000057.1| GENE 2 1393 - 2151 719 252 aa, chain + ## HITS:1 COG:yciK KEGG:ns NR:ns ## COG: yciK COG1028 # Protein_GI_number: 16129232 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli K12 # 1 252 1 252 252 493 98.0 1e-139 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET GRQPQWFILDLLTCTSEDCQQLAQRIVVNYPRLDGVLHNAGLLGDICPMSEQNPQVWQDV MQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA DEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTF DAQPGRKPGISQ >gi|299856394|gb|ADWV01000057.1| GENE 3 2148 - 2738 675 196 aa, chain + ## HITS:1 COG:btuR KEGG:ns NR:ns ## COG: btuR COG2109 # Protein_GI_number: 16129231 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Escherichia coli K12 # 1 196 1 196 196 389 99.0 1e-108 MSDERYQQRQQRVKEKVDARVAQAQDERGIIIVFTGNGKGKTTAAFGTATRAVGHGKKVG VVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWDTQNRESDTAACREVWQHAKRMLADSS LDMVLLDELTYMVAYDYLPLEEVVQALNERPHQQTVIITGRGCHRDILELADTVSELRPI KHAFDAGVKAQIGIDY >gi|299856394|gb|ADWV01000057.1| GENE 4 2778 - 3650 1223 290 aa, chain - ## HITS:1 COG:ECs1841 KEGG:ns NR:ns ## COG: ECs1841 COG1187 # Protein_GI_number: 15831095 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 290 1 290 290 539 100.0 1e-153 MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVR ESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFT TDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGI NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYL RELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRNNG >gi|299856394|gb|ADWV01000057.1| GENE 5 3751 - 4371 780 206 aa, chain - ## HITS:1 COG:ECs1839 KEGG:ns NR:ns ## COG: ECs1839 COG0009 # Protein_GI_number: 15831093 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Escherichia coli O157:H7 # 1 206 13 218 218 419 100.0 1e-117 MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLP DGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIG MRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQK PTTVIDLTDDTPVVVREGVGDVKPFL >gi|299856394|gb|ADWV01000057.1| GENE 6 4368 - 5249 393 293 aa, chain - ## HITS:1 COG:yciV KEGG:ns NR:ns ## COG: yciV COG0613 # Protein_GI_number: 16129227 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Escherichia coli K12 # 1 293 1 293 293 582 100.0 1e-166 MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISR SGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQQTERRNQRAQLIAERLEK AQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLARGKTGYVPPQWCTI EQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLA ALARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:16 2011 Seq name: gi|299856393|gb|ADWV01000058.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont57.1, whole genome shotgun sequence Length of sequence - 4796 bp Number of predicted genes - 7, with homology - 7 Number of transcription units - 5, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 56 - 187 80 ## KPN_pKPN5p08195 putative transposase 2 1 Op 2 . + CDS 235 - 1338 753 ## COG3436 Transposase and inactivated derivatives - Term 1303 - 1343 2.1 3 2 Tu 1 . - CDS 1589 - 1939 68 ## KPN_pKPN5p08242 hypothetical protein - Term 1987 - 2018 0.8 4 3 Op 1 . - CDS 2176 - 2538 157 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 5 3 Op 2 . - CDS 2615 - 3007 120 ## Pmen_0036 transposase IS66 6 4 Tu 1 . - CDS 4372 - 4653 115 ## KPN_pKPN5p08245 putative transposase + Prom 4547 - 4606 5.0 7 5 Tu 1 . + CDS 4630 - 4795 114 ## COG3316 Transposase and inactivated derivatives Predicted protein(s) >gi|299856393|gb|ADWV01000058.1| GENE 1 56 - 187 80 43 aa, chain + ## HITS:1 COG:no KEGG:KPN_pKPN5p08195 NR:ns ## KEGG: KPN_pKPN5p08195 # Name: not_defined # Def: putative transposase # Organism: K.pneumoniae # Pathway: not_defined # 1 43 196 238 238 87 100.0 1e-16 MKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM >gi|299856393|gb|ADWV01000058.1| GENE 2 235 - 1338 753 367 aa, chain + ## HITS:1 COG:ECs4547 KEGG:ns NR:ns ## COG: ECs4547 COG3436 # Protein_GI_number: 15833801 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 4 364 147 510 512 286 43.0 6e-77 MPTVERHIRGKWACDSCETLIQAPVPPQVIDKGIPTAGLLAQVLVAKYADHLPLYRQERM FGRAGLEIPRSTLAEWVGACGVQLQPLVDALRNTLLEHSVLHADETPVSMLAPGKKKTHK AYVWAYCTTPFADLKAAIYDFAPSRAGEHARTFLGDWRGKLVCDDYAGYKAGFGNGITEI GCMAHARRKFYDLHEANKSELAAKALEYIGGLYEIERETKDLPPDMRREIRQTKAKPLAD ALHQWMLAHRQKVPDGSGTAKALDYSLKRWEALTRYLDDGAVPIDNNWVENQIRPWALGR SNWLFAGSLRSGQRAAAVMTLIQSAKLNRHDPYAYLKDVLTRLPTQKNNAIDELLPHNWK PAIPNKV >gi|299856393|gb|ADWV01000058.1| GENE 3 1589 - 1939 68 116 aa, chain - ## HITS:1 COG:no KEGG:KPN_pKPN5p08242 NR:ns ## KEGG: KPN_pKPN5p08242 # Name: not_defined # Def: hypothetical protein # Organism: K.pneumoniae # Pathway: not_defined # 1 116 72 187 187 234 99.0 7e-61 MAKQPSLGRAEATCAALIPIRKNPSWWGLAQDERRKIFEEQSRHIHIGLQYLPAVARRLH HCRDLGESEPFDFLTWFEYSPSDEPGFNRLLAELRASVEWKYVDREIDIRLVHEPA >gi|299856393|gb|ADWV01000058.1| GENE 4 2176 - 2538 157 120 aa, chain - ## HITS:1 COG:sll1163 KEGG:ns NR:ns ## COG: sll1163 COG1917 # Protein_GI_number: 16330416 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Synechocystis # 3 115 18 130 135 77 37.0 6e-15 MRAETESRIFSVDEYVRPSNGEPIRSVVLETNDSVVVVWHAHPGQEIASHVHPHGQDTWT VISGEAEYHQGNGIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAPGNAGFALAEK >gi|299856393|gb|ADWV01000058.1| GENE 5 2615 - 3007 120 130 aa, chain - ## HITS:1 COG:no KEGG:Pmen_0036 NR:ns ## KEGG: Pmen_0036 # Name: not_defined # Def: transposase IS66 # Organism: P.mendocina # Pathway: not_defined # 1 77 362 438 524 93 61.0 2e-18 MALTLINKLYGIERDMEEAGDAQRYQTRQSQSQAFLEQLKARLDKTPPQVTSSKCLGQAI NCLASNWLKLIRYIERGTPAHRQQPCRAGEPPSHVHMTKASPVSSRYVMPTHDGVLTVSV RQSIVFPKGA >gi|299856393|gb|ADWV01000058.1| GENE 6 4372 - 4653 115 93 aa, chain - ## HITS:1 COG:no KEGG:KPN_pKPN5p08245 NR:ns ## KEGG: KPN_pKPN5p08245 # Name: not_defined # Def: putative transposase # Organism: K.pneumoniae # Pathway: not_defined # 44 93 1 50 50 85 98.0 4e-16 MPAFEWVHVQLHQQKGMISLSPPTICNSATENYLNCVNSESGRVRVEAKRASEEYGRVLR RYPLKPGETVERPQRGEVVSSSGVLPPLDPGEY >gi|299856393|gb|ADWV01000058.1| GENE 7 4630 - 4795 114 55 aa, chain + ## HITS:1 COG:Cgl0933 KEGG:ns NR:ns ## COG: Cgl0933 COG3316 # Protein_GI_number: 19552183 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Corynebacterium glutamicum # 1 55 1 55 236 91 72.0 3e-19 MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYA Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:26 2011 Seq name: gi|299856392|gb|ADWV01000059.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont58.1, whole genome shotgun sequence Length of sequence - 5052 bp Number of predicted genes - 5, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 211 84 ## 2 2 Op 1 1/0.000 + CDS 113 - 367 233 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 3 2 Op 2 . + CDS 370 - 3336 1510 ## COG4644 Transposase and inactivated derivatives, TnpA family 4 2 Op 3 . + CDS 3403 - 3780 169 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 5 3 Tu 1 . - CDS 3981 - 4640 421 ## COG4845 Chloramphenicol O-acetyltransferase - Prom 4690 - 4749 4.6 Predicted protein(s) >gi|299856392|gb|ADWV01000059.1| GENE 1 1 - 211 84 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLGERNTLALTLADQGALELGERAHHREHQVRHRRVFASKTEVFLDEFDMHAALCQRLHD PAQIIEIARQ >gi|299856392|gb|ADWV01000059.1| GENE 2 113 - 367 233 84 aa, chain + ## HITS:1 COG:Cgl1671 KEGG:ns NR:ns ## COG: Cgl1671 COG1961 # Protein_GI_number: 19552921 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Corynebacterium glutamicum # 2 81 102 181 184 88 57.0 2e-18 MANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKSLSSERIAELRQRVEAGE QKTKLAREFGISRETLYQYLRTDQ >gi|299856392|gb|ADWV01000059.1| GENE 3 370 - 3336 1510 988 aa, chain + ## HITS:1 COG:CAP0093 KEGG:ns NR:ns ## COG: CAP0093 COG4644 # Protein_GI_number: 15004797 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, TnpA family # Organism: Clostridium acetobutylicum # 317 985 2 671 673 538 39.0 1e-152 MPRRSILSAAERESLLALPDSKDDLIRHYTFNDTDLSIIRQRRGPANRLGFAVQLCYLRF PGVILGVDELPFPPLLKLVADQLKVGVESWNEYGQREQTRREHLSELQTVFGFRPFTMSH YRQAVQMLTELAMQTDKGIVLASALIGHLRRQSVILPALNAVERASAEAITRANRRIYDA LAEPLADAHRRRLDDLLKRRDNGKTTWLAWLRQSPAKPNSRHMLEHIERLKAWQALDLPT GIERLVHQNRLLKIAREGGQMTPADLAKFEPQRRYATLVALATEGMATVTDEIIDLHDRI LGKLFNAAKNKHQQQFQASGKAINAKVRLYGRIGQALIDAKQSGRDAFAAIEAVMSWDSF AESVTEAQKLAQPDDFDFLHRIGESYATLRRYAPEFLAVLKLRAAPAAKNVLDAIEVLRG MNTDNARKLPADAPTGFIKPRWQKLVMTDAGIDRRYYELCALSELKNSLRSGDIWVQGSR QFKDFEDYLVPPEKFTSLKQSSELPLAVATDCEQYLHERLTLLEAQLATVNRMAAANDLP DAIITESGLKITPLDAAVPDTAQALIDQTAMVLPHVKITELLLEVDEWTGFTRHFTHLKS GDLAKDKNLLLTTILADAINLGLTKMAESCPGTTYAKLAWLQAWHTRDETYSTALAELVN AQFRHPFAGHWGDGTTSSSDGQNFRTASKAKSTGHINPKYGSSPGRTFYTHISDQYAPFH TKVVNVGLRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLG DTKLYIPKGDAAYDALKPMIGGTLNIKHVRAHWDEILRLATSIKQGTVTASLMLRKLGSY PRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFNRLGEI RDRSFEQQRYRASGLNLVTAAIVLWNTVYLERAAHALRGNGHAVDDSLLQYLSPLGWEHI NLTGDYLWRSSAKIGAGKFRPLRPLQPA >gi|299856392|gb|ADWV01000059.1| GENE 4 3403 - 3780 169 125 aa, chain + ## HITS:1 COG:SMb21092 KEGG:ns NR:ns ## COG: SMb21092 COG0454 # Protein_GI_number: 16264419 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Sinorhizobium meliloti # 15 122 50 157 158 64 31.0 5e-11 MKDYLCKKLFNRLSGTLVIRARCGNNITGLACCNILYPSPRYSGQLHIKELYVSQCDRNK GTGKAIMRFIARLALEQECLSLSWNAEKSNPGANRFYQALGGRINDHIVNYYLHGESLSK LASGI >gi|299856392|gb|ADWV01000059.1| GENE 5 3981 - 4640 421 219 aa, chain - ## HITS:1 COG:DR2303 KEGG:ns NR:ns ## COG: DR2303 COG4845 # Protein_GI_number: 15807294 # Func_class: V Defense mechanisms # Function: Chloramphenicol O-acetyltransferase # Organism: Deinococcus radiodurans # 14 208 34 222 228 142 37.0 4e-34 MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFLKTVKKNKHKFYPAFI HILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHIY SQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKYYTQG DKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:32 2011 Seq name: gi|299856391|gb|ADWV01000060.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont59.1, whole genome shotgun sequence Length of sequence - 4638 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 4, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 218 287 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 467 - 526 5.0 - TRNA 333 - 408 94.8 # Thr GGT 0 0 - TRNA 415 - 489 64.8 # Gly TCC 0 0 - TRNA 606 - 690 67.6 # Tyr GTA 0 0 - TRNA 699 - 774 91.8 # Thr TGT 0 0 2 2 Tu 1 . - CDS 959 - 1153 61 ## EcSMS35_4423 hypothetical protein - Prom 1402 - 1461 2.1 3 3 Tu 1 . + CDS 1160 - 2086 871 ## COG1072 Panthothenate kinase + Term 2093 - 2122 0.4 4 4 Op 1 6/1.000 - CDS 2115 - 3080 768 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 5 4 Op 2 . - CDS 3077 - 4105 706 ## COG0812 UDP-N-acetylmuramate dehydrogenase - Prom 4128 - 4187 2.8 - 5S_RRNA 4407 - 4537 98.0 # EU285520 [D:5961..6101] # 5S ribosomal RNA # Edwardsiella ictaluri 93-146 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella. Predicted protein(s) >gi|299856391|gb|ADWV01000060.1| GENE 1 3 - 218 287 72 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 72 1 72 407 115 75 9e-26 MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARG ITINTSHVEYDT >gi|299856391|gb|ADWV01000060.1| GENE 2 959 - 1153 61 64 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_4423 NR:ns ## KEGG: EcSMS35_4423 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SECEC # Pathway: not_defined # 1 64 1 64 64 120 98.0 2e-26 MLFYTHKHVSGGHSSIGKAIFAMARHSSVEWVNGQEGNTRWGGIIRKNLCQEAIVEKQCD RYSI >gi|299856391|gb|ADWV01000060.1| GENE 3 1160 - 2086 871 308 aa, chain + ## HITS:1 COG:ZcoaA KEGG:ns NR:ns ## COG: ZcoaA COG1072 # Protein_GI_number: 15804568 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Escherichia coli O157:H7 EDL933 # 1 308 1 308 308 623 100.0 1e-178 MTPYLQFDRNQWAALRDSVPMTLSEDEIARLKGINEDLSLEEVAEIYLPLSRLLNFYISS NLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDG FLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPDGDK TVVQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEDLLQTWYINRFLKFR EGAFTDPDSYFHNYAKLTKEEAIKTAMTLWKEINWLNLKQNILPTRERASLILTKSANHA VEEVRLRK >gi|299856391|gb|ADWV01000060.1| GENE 4 2115 - 3080 768 321 aa, chain - ## HITS:1 COG:ECs4900_2 KEGG:ns NR:ns ## COG: ECs4900_2 COG0340 # Protein_GI_number: 15834154 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Escherichia coli O157:H7 # 77 321 1 245 245 469 99.0 1e-132 MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSL PEPIQLLNAEQILGQLDGGSVAVLPVIDSTNQYLLDRIGELKSGDACVAEYQQAGRGRRG RKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQ DRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESVVNQGWITLQEAGINLDRNTLAA MLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPVKLIIGDKEIFGISRGIDKQGALLL EQDGIIKPWMGGEISLRSAEK >gi|299856391|gb|ADWV01000060.1| GENE 5 3077 - 4105 706 342 aa, chain - ## HITS:1 COG:ECs4899 KEGG:ns NR:ns ## COG: ECs4899 COG0812 # Protein_GI_number: 15834153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 342 1 342 342 710 98.0 0 MNHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLEDYRG TVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQ NIGAYGVELQRVCAYVDCVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRL PKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKLPDPKVNGNAGSFFKNPVVSAET AKALLAQFPTAPNYPQAGGSVKLAAGWLIDQCQLKGMQMGGAAVHRQQALVLINEDNAKS EDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGEVSAVETIS Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:36 2011 Seq name: gi|299856390|gb|ADWV01000061.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont60.1, whole genome shotgun sequence Length of sequence - 2862 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 8 - 107 93.0 # AE017194 [D:4654188..4655695] # 5S ribosomal RNA # Bacillus cereus ATCC 10987 # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group. + 5S_RRNA 174 - 235 93.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + TRNA 408 - 483 59.8 # Glu TTC 0 0 + LSU_RRNA 648 - 2862 99.0 # CP000946 [R:4420328..4423307] # 23S ribosomal RNA # Escherichia coli ATCC 8739 # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. Predicted protein(s) Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:37 2011 Seq name: gi|299856389|gb|ADWV01000062.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont61.1, whole genome shotgun sequence Length of sequence - 2336 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 6 - 116 91.0 # AE017194 [D:4654188..4655695] # 5S ribosomal RNA # Bacillus cereus ATCC 10987 # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group. + 5S_RRNA 183 - 244 93.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + TRNA 331 - 406 59.8 # Glu TTC 0 0 + LSU_RRNA 580 - 2336 99.0 # CP000800 [R:2875908..2878833] # 23S ribosomal RNA # Escherichia coli E24377A # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. Predicted protein(s) Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:38 2011 Seq name: gi|299856388|gb|ADWV01000063.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont62.1, whole genome shotgun sequence Length of sequence - 2310 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 513 351 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 709 - 768 9.9 2 2 Op 1 . - CDS 847 - 1761 290 ## ECIAI1_1512 putative fimbrial-like exported adhesin protein 3 2 Op 2 . - CDS 1821 - 2309 190 ## COG3539 P pilus assembly protein, pilin FimA Predicted protein(s) >gi|299856388|gb|ADWV01000063.1| GENE 1 3 - 513 351 170 aa, chain - ## HITS:1 COG:ydeP KEGG:ns NR:ns ## COG: ydeP COG0243 # Protein_GI_number: 16129460 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 170 1 170 759 369 100.0 1e-102 MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHS ASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSD CYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREY >gi|299856388|gb|ADWV01000063.1| GENE 2 847 - 1761 290 304 aa, chain - ## HITS:1 COG:no KEGG:ECIAI1_1512 NR:ns ## KEGG: ECIAI1_1512 # Name: ydeQ # Def: putative fimbrial-like exported adhesin protein # Organism: E.coli_IAI1 # Pathway: not_defined # 1 304 1 304 304 572 100.0 1e-162 MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDL SQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGD KTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIISNNSVVM PTGGCTVDSRNVTVDLPDFPGSAEIPLGVYCSSEQKLSFYLSGATTDSARQVFANTAPDA TKASGVGVSLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVT FIYE >gi|299856388|gb|ADWV01000063.1| GENE 3 1821 - 2309 190 162 aa, chain - ## HITS:1 COG:ydeR KEGG:ns NR:ns ## COG: ydeR COG3539 # Protein_GI_number: 16129462 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Escherichia coli K12 # 1 162 6 167 167 293 99.0 1e-79 KRFLLATFCALFTATLQAADVTITVNGRVVAKPCTIQTKEANVNLGDLYTRNLQQPGSAS GWHNITLSLTDCPVETSAVTAIVTGSTDNTGYYKNEGTAENIQIELRDDQDATLKNGDSK TVIVDEITRNAQFPLKARAITVNGNASQGTIEALINVIYTWQ Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:44 2011 Seq name: gi|299856387|gb|ADWV01000064.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont63.1, whole genome shotgun sequence Length of sequence - 2125 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 2, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 3/0.000 - CDS 2 - 218 167 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 2 1 Op 2 . - CDS 188 - 556 497 ## COG0316 Uncharacterized conserved protein - Prom 738 - 797 4.5 - Term 832 - 882 12.4 3 2 Op 1 . - CDS 1103 - 1291 295 ## SbBS512_E1886 hypothetical protein - Prom 1316 - 1375 5.9 - Term 1303 - 1345 6.1 4 2 Op 2 6/0.000 - CDS 1391 - 1801 334 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 5 2 Op 3 . - CDS 1798 - 2124 172 ## COG0247 Fe-S oxidoreductase Predicted protein(s) >gi|299856387|gb|ADWV01000064.1| GENE 1 2 - 218 167 72 aa, chain - ## HITS:1 COG:ZynhE KEGG:ns NR:ns ## COG: ZynhE COG0719 # Protein_GI_number: 15802095 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Escherichia coli O157:H7 EDL933 # 1 72 1 72 508 155 98.0 2e-38 MWLWRKLWGIGGTMSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAIS AKRNEPEWMLKF >gi|299856387|gb|ADWV01000064.1| GENE 2 188 - 556 497 122 aa, chain - ## HITS:1 COG:ydiC KEGG:ns NR:ns ## COG: ydiC COG0316 # Protein_GI_number: 16129640 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 122 1 122 122 252 100.0 9e-68 MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQPGMVGVRLGVKQTGCAGFGYVLDSV SEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQIFKFHNPKAQNECGCGESF GV >gi|299856387|gb|ADWV01000064.1| GENE 3 1103 - 1291 295 62 aa, chain - ## HITS:1 COG:no KEGG:SbBS512_E1886 NR:ns ## KEGG: SbBS512_E1886 # Name: not_defined # Def: hypothetical protein # Organism: S.boydii_CDC3083-94 # Pathway: not_defined # 1 62 28 89 89 109 100.0 2e-23 MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLG VH >gi|299856387|gb|ADWV01000064.1| GENE 4 1391 - 1801 334 136 aa, chain - ## HITS:1 COG:ydiI KEGG:ns NR:ns ## COG: ydiI COG2050 # Protein_GI_number: 16129642 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Escherichia coli K12 # 1 136 1 136 136 276 100.0 9e-75 MIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVV LAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGVCKPLHLGSRHQVWQIEIFD EKGRLCCSSRLTTAIL >gi|299856387|gb|ADWV01000064.1| GENE 5 1798 - 2124 172 108 aa, chain - ## HITS:1 COG:ydiJ_2 KEGG:ns NR:ns ## COG: ydiJ_2 COG0247 # Protein_GI_number: 16129643 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Escherichia coli K12 # 1 108 369 476 476 238 100.0 2e-63 ESWYFFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHEAKNHENSLGI YELSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:46 2011 Seq name: gi|299856386|gb|ADWV01000065.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont64.1, whole genome shotgun sequence Length of sequence - 2062 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 193 - 252 3.0 1 1 Tu 1 . + CDS 280 - 1374 1276 ## COG2603 Predicted ATPase + Prom 1397 - 1456 3.0 2 2 Op 1 . + CDS 1490 - 1852 288 ## EC55989_0517 putative regulator with homeodomain-like DNA binding domain 3 2 Op 2 . + CDS 1899 - 2061 113 ## COG2963 Transposase and inactivated derivatives Predicted protein(s) >gi|299856386|gb|ADWV01000065.1| GENE 1 280 - 1374 1276 364 aa, chain + ## HITS:1 COG:ybbB KEGG:ns NR:ns ## COG: ybbB COG2603 # Protein_GI_number: 16128487 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Escherichia coli K12 # 1 364 1 364 364 714 98.0 0 MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMNNDERAAVGTCYKQQGS DAALALGHKLVAGEIRQQRMDAWRAACLQNPQGILCCARGGQRSHIVQSWLYAAGIDYPL VEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQQQPNGVDLEGLARHRGSAFG RTLQPQLSQASFENLLAAEMLKTDARQDLRLWVLEDESRMIGSNHLPECLRERMTQAAIA VVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQEYCEYLHHGLSAIKRRLGLQRYNE LAAQLDTALTTQLTTGSTDGHLAWLVPLLKEYYDPMYRYQLEKKAEKVVFRGEWAEVAEW VKAR >gi|299856386|gb|ADWV01000065.1| GENE 2 1490 - 1852 288 120 aa, chain + ## HITS:1 COG:no KEGG:EC55989_0517 NR:ns ## KEGG: EC55989_0517 # Name: not_defined # Def: putative regulator with homeodomain-like DNA binding domain # Organism: E.coli_55989 # Pathway: not_defined # 1 115 13 127 144 220 100.0 9e-57 MLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRR APNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGVLSPTVVSVLSGYSITDLTQQ >gi|299856386|gb|ADWV01000065.1| GENE 3 1899 - 2061 113 54 aa, chain + ## HITS:1 COG:b0298 KEGG:ns NR:ns ## COG: b0298 COG2963 # Protein_GI_number: 16128283 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 54 4 57 102 70 100.0 8e-13 MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQ Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:50 2011 Seq name: gi|299856385|gb|ADWV01000066.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont65.1, whole genome shotgun sequence Length of sequence - 1995 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 5/0.000 - CDS 54 - 938 921 ## COG0295 Cytidine deaminase - Prom 964 - 1023 4.7 2 1 Op 2 23/0.000 - CDS 1068 - 1763 783 ## COG1346 Putative effector of murein hydrolase 3 1 Op 3 . - CDS 1760 - 1948 175 ## COG1380 Putative effector of murein hydrolase LrgA Predicted protein(s) >gi|299856385|gb|ADWV01000066.1| GENE 1 54 - 938 921 294 aa, chain - ## HITS:1 COG:cdd KEGG:ns NR:ns ## COG: cdd COG0295 # Protein_GI_number: 16130081 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Escherichia coli K12 # 1 294 1 294 294 541 100.0 1e-154 MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSATGLDEDALAFALLPLA AACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALA AITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDYLPDAFGPKDLEIKTLLMDEQ DHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECKDGRIFSGSYAENAAFNPTLPPL QGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDATSATLKALGCHSIDRVLLA >gi|299856385|gb|ADWV01000066.1| GENE 2 1068 - 1763 783 231 aa, chain - ## HITS:1 COG:yohK KEGG:ns NR:ns ## COG: yohK COG1346 # Protein_GI_number: 16130080 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Escherichia coli K12 # 1 231 1 231 231 383 100.0 1e-106 MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPFLMLTGISYDSYFKGSE VLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTSVALLMGASPEIA ASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLA MGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIAPFLFPIILAVMG >gi|299856385|gb|ADWV01000066.1| GENE 3 1760 - 1948 175 62 aa, chain - ## HITS:1 COG:yohJ KEGG:ns NR:ns ## COG: yohJ COG1380 # Protein_GI_number: 16130079 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Escherichia coli K12 # 1 62 71 132 132 109 100.0 2e-24 MALLFVPIGVGVMQYFDLLRAQFGPVVVSCAVSTLVVFLVVSWSSQLVHGERKVVGQKGS EE Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:51 2011 Seq name: gi|299856384|gb|ADWV01000067.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont66.1, whole genome shotgun sequence Length of sequence - 1927 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1641 530 ## ECSE_1455 putative phage tail fiber protein - Prom 1825 - 1884 1.7 Predicted protein(s) >gi|299856384|gb|ADWV01000067.1| GENE 1 3 - 1641 530 546 aa, chain - ## HITS:1 COG:no KEGG:ECSE_1455 NR:ns ## KEGG: ECSE_1455 # Name: not_defined # Def: putative phage tail fiber protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 546 533 1078 1132 1011 99.0 0 MRYVRVNAPAGATSGKYYPVVVMRSAGSVSELASRVIITTATRTAGDPMNNCEFNGFVMP GGWTDRGRYAYGMFWQYQNNERAIHSIMMSNKGDDLRSVFYVDGAAFPVFAFIEDGLSIS APGADLVVNDTTYKFGATNPATECIAADVILDFKSGRGFYESHSLIVNDNLSCKKLFATD EIVARGGNQIRMIGGEYGALWRNDGAKTYLLLTNQGDVYGGWNTLRPFAIDNATGELVIG TKLSASLNGNALTATKLQTPRLVSGVEFDGSKDITLTAAHVAAFARRATDTYADADGGVP WNAESGAYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEGWAE VYTSKNLPPESYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAAAYPSGVIPDMRGW TIKGKPASGRAVLSQEQDGIKSHTHSASVSSTDLGTKTTSSFDYGTKSTNNTGAHTHSLS GSTNAAGNHSHRDGRRFNPSVFKDTYQYGYTSSGQNTWGVQGSVGMSTGWLANTSTDGNH SHSLSG Prediction of potential genes in microbial genomes Time: Sun May 15 16:02:58 2011 Seq name: gi|299856383|gb|ADWV01000068.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont67.1, whole genome shotgun sequence Length of sequence - 1782 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 334 - 393 3.0 1 1 Tu 1 . + CDS 512 - 1096 -88 ## gi|300820199|ref|ZP_07100357.1| conserved hypothetical protein 2 2 Tu 1 . - CDS 1178 - 1654 277 ## cce_5310 hypothetical protein Predicted protein(s) >gi|299856383|gb|ADWV01000068.1| GENE 1 512 - 1096 -88 194 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|300820199|ref|ZP_07100357.1| ## NR: gi|300820199|ref|ZP_07100357.1| conserved hypothetical protein [Escherichia coli MS 107-1] # 1 194 1 194 194 347 100.0 2e-94 MCKCNTVTRDDIPFAIWSGLRPDTPYQCVRAQCGFRFSSASSPTRSLTFGRWGCGERCHL SHVVGDSAVVLSGMSRQIALQTRSEALRRTRRGLNARQGMEGAKNAYRAFKEVRRADTPS QGLSGRQEPRQPPAKPICTVQAVTRLVGGRRPSVLQRWGSGVLPRRFPVALKALPEPWRL GRSGDRGAKTRKGF >gi|299856383|gb|ADWV01000068.1| GENE 2 1178 - 1654 277 158 aa, chain - ## HITS:1 COG:no KEGG:cce_5310 NR:ns ## KEGG: cce_5310 # Name: not_defined # Def: hypothetical protein # Organism: Cyanothece_ATCC51142 # Pathway: not_defined # 4 156 10 163 172 117 44.0 1e-25 MFIDSEKRLKQLSDEAKKNTEDLEEAKKNSRFTQVSPKGWERVRELLKDSQGISALKLYS FLAEHIDPTCGAVVADQQFLAEKLGVSRSTIIRWLNYLESKNALVRIPVAGKVCAYALDP HEVWKGYNTTKNHAAFVTKTLVNKDGDIQRRIMAMFSN Prediction of potential genes in microbial genomes Time: Sun May 15 16:03:14 2011 Seq name: gi|299856382|gb|ADWV01000069.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont68.1, whole genome shotgun sequence Length of sequence - 1721 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 1 - 1429 99.0 # EU014689 [D:1..1541] # 16S ribosomal RNA # Escherichia coli # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. + TRNA 1498 - 1574 88.4 # Ile GAT 0 0 + TRNA 1617 - 1692 88.8 # Ala TGC 0 0 Predicted protein(s) Prediction of potential genes in microbial genomes Time: Sun May 15 16:03:15 2011 Seq name: gi|299856381|gb|ADWV01000070.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont69.1, whole genome shotgun sequence Length of sequence - 1241 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 90 - 151 93.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. + TRNA 221 - 297 88.4 # Ile GAT 0 0 + TRNA 340 - 415 88.8 # Ala TGC 0 0 + LSU_RRNA 569 - 1239 99.0 # CP000800 [R:2875908..2878833] # 23S ribosomal RNA # Escherichia coli E24377A # Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. Predicted protein(s) Prediction of potential genes in microbial genomes Time: Sun May 15 16:03:15 2011 Seq name: gi|299856380|gb|ADWV01000071.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont70.1, whole genome shotgun sequence Length of sequence - 765 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 169 240 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control + Term 180 - 217 6.9 - Term 72 - 115 -0.2 2 2 Tu 1 . - CDS 298 - 765 416 ## COG0513 Superfamily II DNA and RNA helicases Predicted protein(s) >gi|299856380|gb|ADWV01000071.1| GENE 1 2 - 169 240 55 aa, chain + ## HITS:1 COG:ECs1928 KEGG:ns NR:ns ## COG: ECs1928 COG0037 # Protein_GI_number: 15831182 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Escherichia coli O157:H7 # 1 55 257 311 311 116 100.0 1e-26 TNLFDFKGITHGSEVVNGGDLAFDREEIPLQPAGWQPEEDENQLDELRLNVVEVK >gi|299856380|gb|ADWV01000071.1| GENE 2 298 - 765 416 155 aa, chain - ## HITS:1 COG:ECs1927 KEGG:ns NR:ns ## COG: ECs1927 COG0513 # Protein_GI_number: 15831181 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Escherichia coli O157:H7 # 2 155 304 457 457 311 99.0 3e-85 GGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQI KLNWQTPPANSSIVPLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAVHP AHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK Prediction of potential genes in microbial genomes Time: Sun May 15 16:03:16 2011 Seq name: gi|299856379|gb|ADWV01000072.1| Escherichia coli MS 107-1 E_coliMS107-1-1.0.1_Cont71.1, whole genome shotgun sequence Length of sequence - 532 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 531 298 ## COG3209 Rhs family protein Predicted protein(s) >gi|299856379|gb|ADWV01000072.1| GENE 1 3 - 531 298 176 aa, chain - ## HITS:1 COG:rhsB KEGG:ns NR:ns ## COG: rhsB COG3209 # Protein_GI_number: 16131354 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Escherichia coli K12 # 2 176 877 1051 1411 342 98.0 2e-94 GYSYSTTGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHY LYRYDRHGRLTEKTDLIPEGGIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYD PLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRSRIQTIYQPG